# RGD-PIPELINE: ftp-file-extracts # MODULE: chinchilla-genes-version-2023-03-10 # GENERATED-ON: 2026/06/06 # PURPOSE: information about active chinchilla genes extracted from RGD database # CONTACT: rgd.data@mcw.edu # FORMAT: tab delimited text # NOTES: multiple values in a single column are separated by ';' # #COLUMN INFORMATION: #1 GENE_RGD_ID RGD_ID of the gene #2 GENE_TYPE gene type #3 SYMBOL official gene symbol #4 NAME gene name #5 GENE_DESC gene description (if available) #6 CONTIG contig acc id #7 START_POS start position within contig #8 STOP_POS stop position within contig #9 STRAND strand information #10 NCBI_GENE_ID NCBI Gene ID #11 GENBANK_NUCLEOTIDE GenBank Nucleotide ID(s) #12 GENBANK_PROTEIN GenBank Protein ID(s) #13 GENE_REFSEQ_STATUS gene RefSeq Status (from NCBI) 8764154 ncrna LOC102004354 uncharacterized LOC102004354 NW_004955455 10577469 10586870 - 102004354 AGCD01045957;AGCD01045958;GBDJ01114127;XR_262852 MODEL 8935078 protein-coding Dusp29 dual specificity phosphatase 29 ENCODES a protein that exhibits MAP kinase phosphatase activity (ortholog); protein homodimerization activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); muscle cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955437 17002269 17037750 + 102028894 AGCD01034729;AGCD01034730;GBBH01060435;XM_013517070;XM_013517071;XM_013517072;XM_013517073;XM_013517074 XP_013372524;XP_013372525;XP_013372526;XP_013372527;XP_013372528 MODEL 8765869 protein-coding Ap1g2 adaptor related protein complex 1 subunit gamma 2 ASSOCIATED WITH hepatocellular carcinoma (ortholog); thymoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); endosome membrane (ortholog); Golgi membrane (ortholog) NW_004955409 36795351 36803605 + 102017429 AGCD01010481;GBDJ01312856;XM_005377065;XM_005377066 XP_005377122;XP_005377123 MODEL 8872017 ncrna LOC102004356 uncharacterized LOC102004356 NW_004955408 16637908 16665694 - 102004356 AGCD01008442;GBDF01308085;XR_259690 MODEL 39134416 misc_rna 7SK 7SK RNA 8732067 protein-coding Dusp3 dual specificity phosphatase 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); MAP kinase phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); dephosphorylation (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); lung cancer (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); cytosol (ortholog); immunological synapse (ortholog) NW_004955451 17064739 17069964 - 102004773 AGCD01043716;GBCB01004598;GBDF01053135;XM_013519428 XP_013374882 MODEL 8732003 protein-coding Bpifb3 BPI fold containing family B member 3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 28192359 28208946 - 102003885 AGCD01023345;GBBH01229204;XM_005384853 XP_005384910 MODEL 8765030 protein-coding Iba57 iron-sulfur cluster assembly factor IBA57 PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN iron-sulfur cluster assembly complex (ortholog); mitochondrion (ortholog) NW_004955581 284488 289225 - 102013985 AGCD01075665;GBBH01185484;XM_005414235 XP_005414292 MODEL 9050174 protein-coding Adgrg5 adhesion G protein-coupled receptor G5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955433 15156116 15209824 + 102030113 AGCD01031746;AGCD01031747;AGCD01031748;GBDI01290202;XM_005388400;XM_005388401;XM_013516255;XM_013516256 XP_005388457;XP_005388458;XP_013371709;XP_013371710 MODEL 8928418 protein-coding LOC102003664 apoptosis-associated speck-like protein containing a CARD NW_004955493 8053687 8055442 - 102003664 AGCD01061257;GBDF01238687;XM_005405309 XP_005405366 MODEL 9030206 protein-coding Lgals3 galectin 3 ENCODES a protein that exhibits advanced glycation end-product receptor activity (ortholog); carbohydrate binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); eosinophil chemotaxis (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); aortic valve stenosis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); cornified envelope (ortholog); cytoplasm (ortholog) NW_004955409 8448120 8452437 - 102026836 AGCD01009411;GBBH01000869;GBDF01004149;XM_005376752 XP_005376809 MODEL 8999234 protein-coding Cnot6 CCR4-NOT transcription complex subunit 6 ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); RNA exonuclease activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by mRNA destabilization (ortholog); nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); nuclear-transcribed mRNA poly(A) tail shortening (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN CCR4-NOT complex (ortholog) NW_004955408 170399 239492 - 102026720 AGCD01007909;AGCD01007910;AGCD01007911;AGCD01007912;AGCD01007913;GBCB01111852;GBDI01324828;XM_005376001;XM_005376002 XP_005376058;XP_005376059 MODEL 39134417 misc_rna 7SK 7SK RNA 8909720 protein-coding Itga6 integrin subunit alpha 6 ENCODES a protein that exhibits insulin-like growth factor I binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell adhesion mediated by integrin (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH epidermolysis bullosa (ortholog); genetic disease (ortholog); junctional epidermolysis bullosa (ortholog); FOUND IN adherens junction (ortholog); basal part of cell (ortholog); basal plasma membrane (ortholog) NW_004955449 2590982 2665887 - 102014627 AGCD01041830;GBDK01189984;XM_005393215;XM_005393216 XP_005393272;XP_005393273 MODEL 10128276 protein-coding LOC106149892 uncharacterized LOC106149892 NW_004955456 13688948 13689350 + 106149892 AGCD01046610;GBCE01022193;XM_013520620 XP_013376074 MODEL 8739725 protein-coding Dusp4 dual specificity phosphatase 4 ENCODES a protein that exhibits MAP kinase serine/threonine phosphatase activity (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955463 5778945 5794282 - 102021217 AGCD01049644;GBCE01111467;XM_005398363 XP_005398420 MODEL 8864507 protein-coding Elmod1 ELMO domain containing 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cilium assembly (ortholog); intracellular protein localization (ortholog); protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cilium (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955412 9975110 10013932 + 102028513 AGCD01012753;AGCD01012754;GBCE01023906;GBDI01135314;XM_013511123 XP_013366577 MODEL 8714545 pseudo LOC102008336 60S ribosomal protein L13 pseudogene NW_004955508 1222169 1222822 + 102008336 AGCD01065759 MODEL 8751228 protein-coding Atoh8 atonal bHLH transcription factor 8 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); E-box binding (ortholog); INVOLVED IN formation of primary germ layer (ortholog); myoblast proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955424 1775139 1803106 - 102018621 AGCD01024247;AGCD01024248;GBBH01041313;GBCE01007775;XM_013514738 XP_013370192 MODEL 8759743 pseudo LOC102009446 heat shock cognate 71 kDa protein pseudogene NW_004955402 47210640 47213865 + 102009446 AGCD01001177;XR_259129 MODEL 10167406 pseudo LOC102007961 Ig heavy chain V-III region 23-like NW_004955643 40217 40730 + 102007961 AGCD01077723 MODEL 39132211 rrna 5S_rRNA 5S ribosomal RNA 8719040 protein-coding Gpr22 G protein-coupled receptor 22 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 11841813 11849441 + 102004576 AGCD01010835;XM_013510539;XM_013510540 XP_013365993;XP_013365994 MODEL 8856829 protein-coding Cd81 CD81 molecule ENCODES a protein that exhibits cholesterol binding (ortholog); integrin binding (ortholog); MHC class II protein binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell costimulation (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH common variable immunodeficiency (ortholog); common variable immunodeficiency 6 (ortholog); hepatitis C (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955422 14155682 14175181 + 102009393 AGCD01022855;GBDK01013018;XM_005384204 XP_005384261 MODEL 8824938 protein-coding Ak5 adenylate kinase 5 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955423 15587233 15796314 - 102020929 AGCD01023811;AGCD01023812;AGCD01023813;GBDF01114509;GBDJ01355615;XM_005385219 XP_005385276 MODEL 8797575 protein-coding Cldn9 claudin 9 ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN cell-cell junction organization (ortholog); tight junction organization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 116 (ortholog); Hearing Loss (ortholog); nonsyndromic deafness (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); plasma membrane (ortholog) NW_004955442 14326705 14328150 - 102008464 AGCD01037810;GBBH01034314;XM_005391380 XP_005391437 MODEL 39133858 misc_rna 7SK 7SK RNA 8917381 protein-coding Ccl26 C-C motif chemokine ligand 26 ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); CX3C chemokine receptor binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); chemokine-mediated signaling pathway (ortholog); monocyte chemotaxis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); allergic rhinitis (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog) NW_004955456 14554583 14558967 - 102005229 AGCD01046642;AGCD01046643;AGCD01046644;GBDI01244810;XM_005396799 XP_005396856 MODEL 39134116 misc_rna 7SK 7SK RNA 9022021 protein-coding Ephb4 EPH receptor B4 ENCODES a protein that exhibits ephrin receptor activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriovenous malformation (ortholog); autistic disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955573 132328 150879 + 102012701 AGCD01074964;GBDK01146486;XM_005413688;XM_013509481 XP_005413745;XP_013364935 MODEL 39133984 misc_rna 7SK 7SK RNA 8723613 protein-coding C2cd5 C2 calcium dependent domain containing 5 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); intracellular protein transmembrane transport (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955413 17883411 17972865 - 102022582 AGCD01014165;AGCD01014166;GBDJ01129965;GBDJ01129976;XM_005379074 XP_005379131 MODEL 8841411 protein-coding Deptor DEP domain containing MTOR interacting protein ENCODES a protein that exhibits phosphatidic acid binding (ortholog); protein kinase inhibitor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell size (ortholog); negative regulation of protein kinase activity (ortholog); negative regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955417 25538609 25563374 + 102008413 AGCD01018490;AGCD01018491;GBCB01025767;XM_005381914;XM_005381915;XM_013512835 XP_005381971;XP_005381972;XP_013368289 MODEL 39131976 rrna 5S_rRNA 5S ribosomal RNA 8937832 protein-coding Kbtbd7 kelch repeat and BTB domain containing 7 INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein K48-linked ubiquitination (ortholog); regulation of Rac protein signal transduction (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) NW_004955518 4979207 4984721 + 102025156 AGCD01067847;GBDF01110951;XM_005409118 XP_005409175 MODEL 9030080 protein-coding Il10rb interleukin 10 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN interleukin-10-mediated signaling pathway (ortholog); positive regulation of cellular respiration (ortholog); positive regulation of receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); COVID-19 (ortholog); graft-versus-host disease (ortholog); FOUND IN interleukin-10 receptor complex (ortholog); signaling receptor complex (ortholog) NW_004955407 32641097 32659360 + 102019141 AGCD01007680;GBBH01051844;GBBH01051845;XM_005375678 XP_005375735 MODEL 8925499 ncrna LOC102011004 uncharacterized LOC102011004 NW_004955418 480761 481468 + 102011004 AGCD01018677;GBDK01046238;XR_260530 MODEL 8953547 protein-coding Treml4 triggering receptor expressed on myeloid cells like 4 INVOLVED IN intracellular protein localization (ortholog); phagocytosis, engulfment (ortholog); positive regulation of defense response to virus by host (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); uterine carcinosarcoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955437 7827329 7846406 - 102010521 AGCD01034469;GBDK01021729;XM_005389682;XM_013517108;XM_013517109 XP_005389739;XP_013372562;XP_013372563 MODEL 8914153 protein-coding Ibsp integrin binding sialoprotein ENCODES a protein that exhibits integrin binding (ortholog); small molecule binding (ortholog); structural molecule activity (ortholog); INVOLVED IN bone mineralization (ortholog); cell adhesion (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); Neoplasm Metastasis (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955474 2074659 2086289 - 102013823 AGCD01054275;GBCE01002013;XM_005401333;XM_013502793 XP_005401390;XP_013358247 MODEL 8959420 pseudo LOC102017524 40S ribosomal protein S2 pseudogene NW_004955451 137996 138829 + 102017524 AGCD01042920 MODEL 8957073 protein-coding Hpca hippocalcin ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to calcium ion (ortholog); cellular response to electrical stimulus (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); Huntington's disease (ortholog); isolated growth hormone deficiency (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955452 11142282 11150798 + 102003511 AGCD01044328;GBDF01147911;XM_005395099;XM_005395100 XP_005395156;XP_005395157 MODEL 8945064 protein-coding Chrna2 cholinergic receptor nicotinic alpha 2 subunit ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cellular response to nicotine (ortholog); cerebral cortex GABAergic interneuron development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH asthma (ortholog); autosomal dominant nocturnal frontal lobe epilepsy (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 4 (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell periphery (ortholog); neuron projection cytoplasm (ortholog) NW_004955403 49970398 49989095 - 102005096 AGCD01002953;XM_013514203 XP_013369657 MODEL 8972400 protein-coding LOC102012646 uncharacterized LOC102012646 NW_004955416 14157382 14202260 + 102012646 AGCD01017243;AGCD01017244;AGCD01017245;AGCD01017246;GBCQ01192362;XM_013512420 XP_013367874 MODEL 8938718 pseudo LOC102006833 sm-like protein LSM5 NW_004955563 332830 333970 + 102006833 AGCD01074061 MODEL 9059726 protein-coding Cdon cell adhesion associated, oncogene regulated ENCODES a protein that exhibits coreceptor activity (ortholog); protein carrier activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cell adhesion (ortholog); cell fate specification (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); coloboma (ortholog); FOUND IN cell surface (ortholog) NW_004955412 27004391 27093968 - 102027960 AGCD01013225;AGCD01013226;AGCD01013227;GBDJ01063207;XM_005378484;XM_013511115;XM_013511116;XM_013511117;XM_013511118;XM_013511119;XM_013511120;XR_001232897;XR_001232898 XP_005378541;XP_013366569;XP_013366570;XP_013366571;XP_013366572;XP_013366573;XP_013366574 MODEL 8922629 protein-coding Ccdc12 coiled-coil domain containing 12 PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955420 25212888 25257733 + 102019176 AGCD01021347;GBCE01002638;XM_013513389 XP_013368843 MODEL 8793759 pseudo LOC102005395 DNA polymerase delta subunit 4 pseudogene NW_004955425 561831 562286 - 102005395 AGCD01025186 MODEL 9047464 protein-coding Amt aminomethyltransferase ENCODES a protein that exhibits aminomethyltransferase activity (ortholog); INVOLVED IN glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Acidoses (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955532 1351743 1358220 - 102013210 AGCD01070179;AGCD01070180;GBCE01187398;XM_005410201 XP_005410258 MODEL 8814490 protein-coding Efcab2 EF-hand calcium binding domain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955406 8115813 8239352 + 102017303 AGCD01005792;AGCD01005793;AGCD01005794;AGCD01005795;AGCD01005796;AGCD01005797;AGCD01005798;AGCD01005799;AGCD01005800;AGCD01005801;GBBH01131572;GBCE01162934;XM_013520411 XP_013375865 MODEL 8955019 protein-coding Cant1 calcium activated nucleotidase 1 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); calcium ion binding (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); proteoglycan biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH cervical cancer (ortholog); Desbuquois dysplasia (ortholog); Desbuquois Dysplasia 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955506 3707028 3722339 + 102027207 AGCD01065319;GBCQ01101032;XM_005407348;XM_005407349;XM_005407350;XM_005407351;XM_005407352 XP_005407405;XP_005407406;XP_005407407;XP_005407408;XP_005407409 MODEL 9006201 ncrna LOC102009086 uncharacterized LOC102009086 NW_004955428 14583845 14601030 - 102009086 AGCD01027989;AGCD01027990;GBCB01109528;XR_261303 MODEL 8734292 ncrna LOC102011385 uncharacterized LOC102011385 NW_004955403 10477798 10481600 + 102011385 AGCD01001922;GBDF01013779;XR_259170 MODEL 9055647 ncrna LOC102010236 uncharacterized LOC102010236 NW_004955465 1021083 1041695 - 102010236 AGCD01050329;GBDF01287130;XR_263230 MODEL 8768876 pseudo LOC102003982 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 pseudogene NW_004955423 23273272 23274390 + 102003982 AGCD01023999 MODEL 8889622 pseudo LOC102006469 signal recognition particle 14 kDa protein-like NW_004955492 7321458 7321798 + 102006469 AGCD01060786 MODEL 8802628 protein-coding Bpifb4 BPI fold containing family B member 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955422 28166892 28190403 - 102004398 AGCD01023344;AGCD01023345;GBBH01019084;XM_013513875;XM_013513876 XP_013369329;XP_013369330 MODEL 9047164 protein-coding Cfap20dc CFAP20 domain containing ASSOCIATED WITH acute myeloid leukemia (ortholog); thymoma (ortholog) NW_004955430 1216453 1472083 + 102029990 AGCD01029118;AGCD01029119;AGCD01029120;AGCD01029121;AGCD01029122;AGCD01029123;AGCD01029124;AGCD01029125;AGCD01029126;GBDI01225416;GBDI01225431;XM_005387269;XM_005387270;XM_005387271;XM_005387272;XM_005387273;XM_005387274;XM_005387276;XM_013515699 XP_005387326;XP_005387327;XP_005387328;XP_005387329;XP_005387330;XP_005387331;XP_005387333;XP_013371153 MODEL 9064031 ncrna LOC102021596 uncharacterized LOC102021596 NW_004955541 3430941 3433438 - 102021596 AGCD01071448;GBBH01213905;XR_001232138 MODEL 39134418 misc_rna 7SK 7SK RNA 8990785 protein-coding Adgrg6 adhesion G protein-coupled receptor G6 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); laminin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cartilage development (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955436 17804548 17931667 - 102009873 AGCD01033951;AGCD01033952;GBCE01008915;GBCE01008917;XM_005389253;XM_005389254;XM_013516670;XM_013516671;XM_013516672;XM_013516673;XM_013516674 XP_005389310;XP_005389311;XP_013372124;XP_013372125;XP_013372126;XP_013372127;XP_013372128 MODEL 9046410 protein-coding Ap1m1 adaptor related protein complex 1 subunit mu 1 INVOLVED IN endosome to melanosome transport (ortholog); melanosome organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN synapse (ortholog) NW_004955524 1345125 1360869 - 102030117 AGCD01068745;AGCD01068746;AGCD01068747;AGCD01068748;GBCB01023140;GBCE01032136;XM_013507334 XP_013362788 MODEL 8779170 protein-coding Gata3 GATA binding protein 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); aortic valve morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 24448446 24477885 + 102010495 AGCD01022216;AGCD01022217;GBCE01042494;XM_005383881;XM_005383882;XM_005383883 XP_005383938;XP_005383939;XP_005383940 MODEL 39131523 protein-coding FBXL14 F-box and leucine rich repeat protein 14 8712490 pseudo LOC102004357 transcription elongation factor SPT4-A-like NW_004955457 12370358 12370718 + 102004357 AGCD01047009 MODEL 9022162 protein-coding Acta1 actin alpha 1, skeletal muscle ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to potassium ion (ortholog); response to mechanical stimulus (ortholog); response to steroid hormone (ortholog); ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); aortic dissection (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); sarcomere (ortholog) NW_004955492 8644696 8647412 + 102017886 AGCD01060822;GBDK01324003;XM_005405008 XP_005405065 MODEL 9000429 protein-coding Ak6 adenylate kinase 6 ENCODES a protein that exhibits AMP kinase activity (ortholog); FOUND IN Cajal body (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955575 61082 78415 - 102022240 AGCD01075200;AGCD01075201;GBCB01023039;XM_005413912 XP_005413969 MODEL 8728616 protein-coding Il11 interleukin 11 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-11 receptor binding (ortholog); INVOLVED IN interleukin-11-mediated signaling pathway (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of hormone secretion (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); colon adenocarcinoma (ortholog); cystitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955567 868272 883563 + 102024172 AGCD01074441;AGCD01074442;AGCD01074443;GBDF01023421;XM_005413324;XM_005413325;XM_013509308;XM_013509309 XP_005413381;XP_005413382;XP_013364762;XP_013364763 MODEL 8788402 protein-coding LOC102010238 olfactory receptor 151 NW_004955412 25594862 25595791 + 102010238 AGCD01013161;XM_005378427 XP_005378484 MODEL 8751234 protein-coding Itga7 integrin subunit alpha 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arteriosclerosis (ortholog); Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); integrin alpha7-beta1 complex (ortholog) NW_004955458 3322735 3343275 - 102018805 AGCD01047294;GBCB01006141;GBDI01076300;XM_005397251;XM_005397252;XM_013520967;XM_013520968 XP_005397308;XP_005397309;XP_013376421;XP_013376422 MODEL 8925934 protein-coding Lgals3bp galectin 3 binding protein ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955506 3731810 3741314 + 102028775 AGCD01065319;GBBH01003797;XM_005407353 XP_005407410 MODEL 9000276 protein-coding LOC102017526 uncharacterized LOC102017526 NW_004955844 877 5035 + 102017526 AGCD01078475;AGCD01078476;GBDK01121913;XM_005415129 XP_005415186 MODEL 39132213 rrna 5S_rRNA 5S ribosomal RNA 8793346 protein-coding Cnot6l CCR4-NOT transcription complex subunit 6 like ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN mRNA destabilization (ortholog); nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955433 2206462 2290773 - 102017907 AGCD01031383;AGCD01031384;GBCE01163313;GBCE01163314;XM_005388195 XP_005388252 MODEL 8922662 protein-coding Cd82 CD82 molecule ASSOCIATED WITH breast carcinoma (ortholog); cervical cancer (ortholog); cervical squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955422 3035887 3069298 - 102023045 AGCD01022499;AGCD01022500;GBBH01000451;XM_005384078;XM_013514276;XM_013514278;XM_013514279 XP_005384135;XP_013369730;XP_013369732;XP_013369733 MODEL 8932390 protein-coding Elmod2 ELMO domain containing 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of defense response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); long QT syndrome (ortholog) NW_004955428 3289593 3308927 - 102013315 AGCD01027652;GBCQ01127045;XM_005386672;XM_005386673 XP_005386729;XP_005386730 MODEL 39133859 misc_rna 7SK 7SK RNA 39133985 misc_rna 7SK 7SK RNA 8798051 protein-coding Abcd2 ATP binding cassette subfamily D member 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); fatty acid biosynthetic process (ortholog); myelin maintenance (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955505 717800 769702 + 102028992 AGCD01064961;GBDF01177037;XM_005407101 XP_005407158 MODEL 8783171 protein-coding Hpcal1 hippocalcin like 1 INVOLVED IN liver development (ortholog); ASSOCIATED WITH cataract 13 with adult i phenotype (ortholog); Experimental Liver Cirrhosis (ortholog); melanoma (ortholog) NW_004955487 5546795 5601489 + 102028303 AGCD01059340;AGCD01059341;GBDF01084681;XM_005404408;XM_005404409 XP_005404465;XP_005404466 MODEL 8762091 protein-coding Efcab3 EF-hand calcium binding domain 3 ASSOCIATED WITH hepatocellular carcinoma (ortholog); uveal melanoma (ortholog) NW_004955478 9284421 9778849 - 102009052 AGCD01056061;AGCD01056062;AGCD01056063;AGCD01056064;AGCD01056065;AGCD01056066;AGCD01056067;AGCD01056068;AGCD01056069;AGCD01056070;AGCD01056071;AGCD01056072;AGCD01056073;AGCD01056074;AGCD01056075;AGCD01056076;AGCD01056077;AGCD01056078;AGCD01056079;AGCD01056080;AGCD01056081;AGCD01056082;AGCD01056083;AGCD01056084;AGCD01056085;AGCD01056086;AGCD01056087;AGCD01056088;AGCD01056089;AGCD01056090;AGCD01056091;AGCD01056092;AGCD01056093;AGCD01056094;AGCD01056095;AGCD01056096;AGCD01056097;GBDK01169061;XM_005402243;XM_005402244;XM_005402245;XM_005402246;XM_005402247 XP_005402300;XP_005402301;XP_005402302;XP_005402303;XP_005402304 MODEL 39131979 rrna 5S_rRNA 5S ribosomal RNA 8928062 protein-coding Dusp5 dual specificity phosphatase 5 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of vasoconstriction (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Brain Injuries (ortholog); Cardiac Fibrosis (ortholog) NW_004955485 914250 927640 - 102016273 AGCD01058466;AGCD01058467;GBBH01223883;GBDF01144994;XM_013504121 XP_013359575 MODEL 8908528 protein-coding Ccl27 C-C motif chemokine ligand 27 ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); positive regulation of T cell chemotaxis (ortholog); regulation of actin cytoskeleton organization (ortholog); ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog) NW_004955472 1470407 1474800 + 102020106 AGCD01053394;AGCD01053395;GBDF01048978;XM_005401044 XP_005401101 MODEL 10275540 ncrna LOC106149893 uncharacterized LOC106149893 NW_004955456 13264037 13266528 - 106149893 AGCD01046582;GBCB01008407;XR_001236349;XR_001236350 MODEL 8988956 ncrna LOC102003665 uncharacterized LOC102003665 NW_004955422 25513884 25522156 + 102003665 AGCD01023251;GBDF01153136;XR_260914 MODEL 8807388 protein-coding LOC102009447 vomeronasal type-1 receptor 4-like NW_004955603 356667 357605 - 102009447 AGCD01076839;XM_005414843 XP_005414900 MODEL 8945811 protein-coding Acta2 actin alpha 2, smooth muscle ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); glomerular mesangial cell development (ortholog); juxtaglomerular apparatus development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH aortic disease (ortholog); aortic dissection (ortholog); atrial heart septal defect (ortholog); FOUND IN actin cytoskeleton (ortholog); basement membrane (ortholog); cytoplasm (ortholog) NW_004955425 4023001 4039980 + 102019511 AGCD01025307;AGCD01025308;GBCQ01033579;XM_005385859 XP_005385916 MODEL 39134419 misc_rna 7SK 7SK RNA 9046497 protein-coding Ccdc120 coiled-coil domain containing 120 INVOLVED IN intracellular protein localization (ortholog); microtubule anchoring at centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Dwarfism (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); cytoplasm (ortholog) NW_004955543 577078 594076 + 102005510 AGCD01071593;GBDF01094455;XM_005411315;XM_013508175;XM_013508176;XM_013508177;XM_013508178;XM_013508179;XM_013508180;XM_013508181 XP_005411372;XP_013363629;XP_013363630;XP_013363631;XP_013363632;XP_013363633;XP_013363634;XP_013363635 MODEL 8878929 protein-coding Atosa atos homolog A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955409 2261169 2345489 + 102018262 AGCD01009194;AGCD01009195;AGCD01009196;AGCD01009197;GBBH01090816;GBCB01023407;XM_013510275;XM_013510277 XP_013365729;XP_013365731 MODEL 8728037 protein-coding Ephb6 EPH receptor B6 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); SH2 domain binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); positive regulation of T cell costimulation (ortholog); T cell mediated immunity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog) NW_004955494 812482 820679 + 102003560 AGCD01061385;GBDF01008198;XM_005405381;XM_005405383;XM_013505009;XM_013505010;XM_013505011;XM_013505012 XP_005405438;XP_005405440;XP_013360463;XP_013360464;XP_013360465;XP_013360466 MODEL 8837543 protein-coding Cldnd1 claudin domain containing 1 ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955427 101159 108655 - 102014807 AGCD01026806;AGCD01026807;GBCC01001269;XM_005386271;XM_005386272;XM_005386273;XM_013515217 XP_005386328;XP_005386329;XP_005386330;XP_013370671 MODEL 8843566 protein-coding Amtn amelotin INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 3A (ortholog); amelogenesis imperfecta type 3B (ortholog); cervical cancer (ortholog); FOUND IN basement membrane (ortholog); cell-cell junction (ortholog); extracellular matrix (ortholog) NW_004955447 2422189 2433633 - 102027025 AGCD01040542;XM_013518488 XP_013373942 MODEL 8867938 protein-coding LOC102009091 late lactation protein B-like NW_004955513 2501589 2504529 + 102009091 AGCD01066880;GBBH01002386;XM_013506585 XP_013362039 MODEL 8965918 protein-coding Cdpf1 cysteine rich DPF motif domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 30366346 30372210 - 102009270 AGCD01014608;GBDF01124426;XM_005379502;XM_013511381;XM_013511382;XM_013511383;XM_013511384;XM_013511385 XP_005379559;XP_013366835;XP_013366836;XP_013366837;XP_013366838;XP_013366839 MODEL 8703607 protein-coding LOC102007969 maestro heat-like repeat-containing protein family member 7 NW_004955406 37107660 37135900 + 102007969 AGCD01006571;GBDF01021853;XM_013522084 XP_013377538 MODEL 8869555 protein-coding LOC102011387 serine/threonine-protein phosphatase with EF-hands 2-like NW_004955797 7064 18498 + 102011387 AGCD01078368;GBCQ01026990;GBDJ01093079;XM_013510194 XP_013365648 MODEL 8880582 protein-coding LOC102008337 olfactory receptor 1030 NW_004955511 1667797 1668753 - 102008337 AGCD01066377;XM_005407970 XP_005408027 MODEL 39134117 misc_rna 7SK 7SK RNA 8886297 ncrna LOC102005400 uncharacterized LOC102005400 NW_004955507 3809575 3820981 - 102005400 AGCD01065638;GBDF01158104;XR_001231636 MODEL 10340989 protein-coding Gpr25 G protein-coupled receptor 25 ENCODES a protein that exhibits C-X-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); leukocyte chemotaxis (ortholog); lymphocyte chemotaxis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 37065511 37066771 + 106150185 AGCD01006571;GBBH01145319;XM_013522068 XP_013377522 MODEL 39131495 protein-coding C2orf69 chromosome 2 open reading frame 69 8766832 ncrna LOC102006834 uncharacterized LOC102006834 NW_004955445 2237508 2240322 - 102006834 AGCD01039351;GBDF01077375;XR_262296 MODEL 8869401 ncrna LOC102006479 uncharacterized LOC102006479 NW_004955497 7454409 7464014 - 102006479 AGCD01062676;GBDF01019845;XR_264210 MODEL 8912805 ncrna LOC102011005 uncharacterized LOC102011005 NW_004955418 27966614 27993848 - 102011005 AGCD01019421;AGCD01019422;GBDF01041994;XR_260587;XR_260588 MODEL 8807400 protein-coding Ibtk inhibitor of Bruton tyrosine kinase ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of protein phosphorylation (ortholog); release of sequestered calcium ion into cytosol (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955411 10052584 10132203 - 102010347 AGCD01011770;AGCD01011771;AGCD01011772;GBDJ01272577;XM_005377680;XM_005377681;XM_005377682;XM_005377683;XM_013510860 XP_005377737;XP_005377738;XP_005377739;XP_005377740;XP_013366314 MODEL 9038850 ncrna LOC102004359 uncharacterized LOC102004359 NW_004955409 13531193 13534835 + 102004359 AGCD01009612;GBDF01214064;XR_259783 MODEL 8994995 protein-coding LOC102012648 galectin-9-like NW_004955481 5681486 5685579 - 102012648 AGCD01057000;XM_005402781 XP_005402838 MODEL 8942983 pseudo LOC102010239 mortality factor 4-like protein 1 pseudogene NW_004955412 28163408 28164375 + 102010239 AGCD01013249 MODEL 8919698 protein-coding Chrna3 cholinergic receptor nicotinic alpha 3 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); activation of transmembrane receptor protein tyrosine kinase activity (ortholog); behavioral response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; nicotine pharmacodynamics pathway; nicotine pharmacokinetics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) NW_004955450 979630 1011316 - 102011926 AGCD01042346;AGCD01042347;AGCD01042348;AGCD01042349;GBBH01004760;XM_005393455 XP_005393512 MODEL 8783345 protein-coding Canx calnexin ENCODES a protein that exhibits apolipoprotein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); dendrite cytoplasm (ortholog); dendritic spine (ortholog) NW_004955408 850773 894362 - 102004245 AGCD01007937;AGCD01007938;AGCD01007939;GBCQ01000683;XM_005376018;XM_005376019 XP_005376075;XP_005376076 MODEL 8921665 protein-coding Dera deoxyribose-phosphate aldolase ENCODES a protein that exhibits deoxyribose-phosphate aldolase activity (ortholog); INVOLVED IN 2'-deoxyribonucleoside catabolic process (ortholog); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955413 12571341 12682985 + 102006998 AGCD01013992;AGCD01013993;AGCD01013994;AGCD01013995;GBDF01053025;XM_005379023;XM_013511619 XP_005379080;XP_013367073 MODEL 8924276 protein-coding Cfap210 cilia and flagella associated protein 210 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH high grade glioma (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955449 4886108 4912371 + 102026817 AGCD01041902;GBCE01045363;XM_005393253 XP_005393310 MODEL 8905003 protein-coding Cnot7 CCR4-NOT transcription complex subunit 7 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); DNA-binding transcription factor binding (ortholog); piRNA binding (ortholog); INVOLVED IN deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); defense response to virus (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog); nuclear body (ortholog) NW_004955463 285228 306077 + 102008509 AGCD01049479;AGCD01049480;GBCE01118023;XM_005398331;XM_005398332;XM_005398333;XM_005398334;XM_013521505 XP_005398388;XP_005398389;XP_005398390;XP_005398391;XP_013376959 MODEL 9016990 protein-coding Gata4 GATA binding protein 4 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); co-SMAD binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); 46,XY sex reversal 3 (ortholog); acanthosis nigricans (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955403 52958318 53029267 + 102029354 AGCD01003023;AGCD01003024;AGCD01003025;AGCD01003026;AGCD01003027;GBDF01085885;GBDF01085887;XM_005373824;XM_013514543;XM_013514548;XM_013514552 XP_005373881;XP_013369997;XP_013370002;XP_013370006 MODEL 8707116 protein-coding Bpifb6 BPI fold containing family B member 6 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955422 28214188 28224604 - 102004396 AGCD01023345;GBDF01181601;XM_005384854 XP_005384911 MODEL 9024376 protein-coding Adgrg7 adhesion G protein-coupled receptor G7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955427 2234640 2305510 + 102023379 AGCD01026894;AGCD01026895;GBCQ01162719;XM_005386303;XM_005386304 XP_005386360;XP_005386361 MODEL 8777792 protein-coding Trerf1 transcriptional regulating factor 1 ENCODES a protein that exhibits nuclear progesterone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coactivator binding (ortholog); INVOLVED IN cellular response to progesterone stimulus (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 8411951 8600283 - 102018648 AGCD01034489;AGCD01034490;AGCD01034491;AGCD01034492;GBDF01084113;GBDK01059855;XM_013516789 XP_013372243 MODEL 8897573 protein-coding Fbxl14 F-box and leucine rich repeat protein 14 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955454 4133718 4137363 - 102024759 AGCD01045114;AGCD01045115;AGCD01045116;GBCQ01152982;GBDI01222013;XM_005395950 XP_005396007 MODEL 39131980 rrna 5S_rRNA 5S ribosomal RNA 9008652 protein-coding Ap1m2 adaptor related protein complex 1 subunit mu 2 ENCODES a protein that exhibits clathrin-cargo adaptor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955495 1759247 1768479 - 102007671 AGCD01061725;AGCD01061726;GBDI01176729;XM_005405606;XM_013505143 XP_005405663;XP_013360597 MODEL 8936036 protein-coding Ak7 adenylate kinase 7 ENCODES a protein that exhibits AMP kinase activity (ortholog); dCMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hydrocephalus (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); sperm principal piece (ortholog) NW_004955438 18178822 18233051 + 102023529 AGCD01035466;AGCD01035467;GBDF01008611;GBDK01130472;XM_005390399 XP_005390456 MODEL 8920238 ncrna LOC102003985 uncharacterized LOC102003985 NW_004955424 19333276 19352042 + 102003985 AGCD01024815;AGCD01024816;GBDF01262654;XR_261082 MODEL 8880245 protein-coding Il11ra interleukin 11 receptor subunit alpha ENCODES a protein that exhibits interleukin-11 binding (ortholog); interleukin-11 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); decidualization (ortholog); developmental process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); signaling receptor complex (ortholog) NW_004955472 1474802 1485352 - 102021002 AGCD01053395;GBBH01063003;XM_005401045;XM_013523015;XM_013523016;XM_013523017;XM_013523018 XP_005401102;XP_013378469;XP_013378470;XP_013378471;XP_013378472 MODEL 41410892 protein-coding KBTBD7 kelch repeat and BTB domain containing 7 39134424 misc_rna 7SK 7SK RNA 39132214 rrna 5S_rRNA 5S ribosomal RNA 8789674 protein-coding LOC102003666 dnaJ homolog subfamily B member 6-like NW_004955423 9538198 9539071 - 102003666 AGCD01023662;GBDF01008801;XM_013514572 XP_013370026 MODEL 9014073 protein-coding LOC102021597 alpha-1-antiproteinase S-like ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN negative regulation of serine-type endopeptidase activity (ortholog); response to chromate (ortholog); response to cytokine (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH otitis media; Otitis Media with Effusion; acute kidney failure (ortholog); FOUND IN extracellular region; endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955438 17920200 17929105 + 102021597 AGCD01035456;GBDF01154079;XM_005390393 XP_005390450 MODEL 39134118 misc_rna 7SK 7SK RNA 39133860 misc_rna 7SK 7SK RNA 39133986 misc_rna 7SK 7SK RNA 9036809 protein-coding Cnot8 CCR4-NOT transcription complex subunit 8 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by mRNA destabilization (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of mRNA catabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN CCR4-NOT complex (ortholog); nucleus (ortholog) NW_004955408 9112208 9132650 + 102006423 AGCD01008235;GBDK01028877;XM_005376203;XM_005376205;XM_013508686;XM_013508688;XM_013508692 XP_005376260;XP_005376262;XP_013364140;XP_013364142;XP_013364146 MODEL 8859926 protein-coding Ccl28 C-C motif chemokine ligand 28 ENCODES a protein that exhibits chemokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell chemotaxis (ortholog); negative regulation of leukocyte tethering or rolling (ortholog); ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); bronchial disease (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) NW_004955446 18902465 18925178 + 102004434 AGCD01040418;GBBH01102278;XM_013518448 XP_013373902 MODEL 8884017 pseudo LOC102017527 histone-binding protein RBBP4 pseudogene NW_004955403 47556881 47558928 - 102017527 AGCD01002891 MODEL 8809088 pseudo LOC102009451 archaemetzincin-2-like NW_004955403 30870358 30871472 + 102009451 AGCD01002408 MODEL 8882860 protein-coding Abcd3 ATP binding cassette subfamily D member 3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN mitochondrion (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) NW_004955423 280497 359711 - 102008743 AGCD01023411;GBCB01039248;XM_005384998 XP_005385055 MODEL 8892021 protein-coding Itga8 integrin subunit alpha 8 INVOLVED IN cell-matrix adhesion (ortholog); establishment of protein localization (ortholog); extracellular matrix organization (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; glomerulonephritis pathway; integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant polycystic kidney disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); dendritic spine membrane (ortholog) NW_004955429 11932764 12120757 + 102004096 AGCD01028697;AGCD01028698;AGCD01028699;AGCD01028700;AGCD01028701;AGCD01028702;GBDF01141385;XM_005386975 XP_005387032 MODEL 8844471 protein-coding Hpcal4 hippocalcin like 4 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN response to heat (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955452 17193505 17205174 - 102028611 AGCD01044545;GBDI01080383;XM_005395263;XM_013519650 XP_005395320;XP_013375104 MODEL 9030436 protein-coding Cldnd2 claudin domain containing 2 ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog) NW_004955558 1030594 1032198 + 102011253 AGCD01073411;GBDF01082039;XM_005412679;XM_013508904;XM_013508905;XM_013508907;XM_013508908 XP_005412736;XP_013364358;XP_013364359;XP_013364361;XP_013364362 MODEL 9050514 protein-coding Dusp6 dual specificity phosphatase 6 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); brain ischemia (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955405 26662018 26666314 - 102014004 AGCD01005204;GBDK01000937;XM_005374434 XP_005374491 MODEL 10295351 ncrna LOC106149894 uncharacterized LOC106149894 NW_004955456 16004172 16005972 + 106149894 AGCD01046681;GBDK01118045;XR_001236356 MODEL 9052734 protein-coding Amz1 archaelysin family metallopeptidase 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955460 12631296 12649891 - 102011846 AGCD01048661;GBCE01079732;XM_013521144;XM_013521145;XM_013521146;XM_013521147 XP_013376598;XP_013376599;XP_013376600;XP_013376601 MODEL 8821811 protein-coding Efcab5 EF-hand calcium binding domain 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog) NW_004955481 3207789 3381228 - 102009176 AGCD01056895;AGCD01056896;AGCD01056897;AGCD01056898;AGCD01056899;AGCD01056900;AGCD01056901;AGCD01056902;AGCD01056903;GBDF01088005;XM_013503350;XM_013503351;XM_013503352;XM_013503353;XM_013503354;XM_013503355 XP_013358804;XP_013358805;XP_013358806;XP_013358807;XP_013358808;XP_013358809 MODEL 8898092 protein-coding Atosb atos homolog B ASSOCIATED WITH major depressive disorder (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955472 1066661 1077960 + 102012635 AGCD01053370;AGCD01053371;AGCD01053372;GBDJ01136370;XM_005401017;XM_005401019;XM_005401021;XM_013522969 XP_005401074;XP_005401076;XP_005401078;XP_013378423 MODEL 8743980 protein-coding Ephx1 epoxide hydrolase 1 ENCODES a protein that exhibits cis-stilbene-oxide hydrolase activity (ortholog); enzyme binding (ortholog); epoxide hydrolase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cellular response to glucocorticoid stimulus (ortholog); diol biosynthetic process (ortholog); PARTICIPATES IN carbamazepine pharmacokinetics pathway; phenytoin pharmacodynamics pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN membrane (ortholog) NW_004955520 116363 142983 - 102004192 AGCD01068006;AGCD01068007;AGCD01068008;GBBH01000987;GBDI01022276;XM_013507052 XP_013362506 MODEL 9026124 ncrna LOC102009092 uncharacterized LOC102009092 NW_004955431 13020164 13023563 + 102009092 AGCD01030276;GBDF01210949;XR_261468 MODEL 8945647 protein-coding LOC102008338 olfactory receptor 5W2-like NW_004955511 810336 811271 + 102008338 AGCD01066344;XM_005408211 XP_005408268 MODEL 8744796 protein-coding Lgals4 galectin 4 ENCODES a protein that exhibits galactoside binding (ortholog); INVOLVED IN antibacterial peptide biosynthetic process (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955468 694831 701623 + 102009366 AGCD01051725;AGCD01051726;GBBH01043207;XM_005399830;XM_013522455 XP_005399887;XP_013377909 MODEL 9025242 protein-coding LOC102011388 cytochrome P450 2D16-like NW_004956190 7085 8242 + 102011388 AGCD01079215;GBCQ01011641;GBDK01146022;XM_005415175 XP_005415232 MODEL 8934050 protein-coding Cd83 CD83 molecule ENCODES a protein that exhibits ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN negative regulation of interleukin-4 production (ortholog); positive regulation of CD4-positive, alpha-beta T cell differentiation (ortholog); positive regulation of interleukin-10 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); cervical cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955465 676006 692770 - 102009363 AGCD01050313;GBDK01237781;XM_005398793 XP_005398850 MODEL 9019281 protein-coding Elmod3 ELMO domain containing 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN auditory receptor cell development (ortholog); cilium assembly (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant nonsyndromic deafness 81 (ortholog); autosomal recessive nonsyndromic deafness 88 (ortholog); FOUND IN cilium (ortholog); Golgi apparatus (ortholog) NW_004955424 2082480 2107599 - 102005273 AGCD01024262;GBBH01150506;XM_005385437;XM_005385438;XM_013514628 XP_005385494;XP_005385495;XP_013370082 MODEL 8825357 protein-coding LOC102005403 olfactory receptor 8J3-like NW_004955511 1471770 1480062 + 102005403 AGCD01066369;XM_005407962 XP_005408019 MODEL 8964666 pseudo LOC102006483 uncharacterized LOC102006483 NW_004955503 49005 53085 - 102006483 AGCD01064480 MODEL 8959795 ncrna LOC102006838 uncharacterized LOC102006838 NW_004955445 17445275 17465555 - 102006838 AGCD01039888;AGCD01039889;AGCD01039890;GBDF01307023;XR_001235559;XR_001235560;XR_262346 MODEL 8927838 protein-coding Ica1 islet cell autoantigen 1 ENCODES a protein that exhibits membrane curvature sensor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); diabetes mellitus (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); Golgi membrane (ortholog) NW_004955432 15136606 15297415 - 102029102 AGCD01031059;AGCD01031060;AGCD01031061;GBBH01051699;XM_005388097;XM_005388098;XM_005388099;XM_005388100;XM_005388101 XP_005388154;XP_005388155;XP_005388156;XP_005388157;XP_005388158 MODEL 8979037 protein-coding Actb actin beta ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); apical protein localization (ortholog); axonogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; INO80 family mediated chromatin remodeling pathway; mitochondria transport pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical junction complex (ortholog) NW_004955460 10358100 10361585 - 102030392 AGCD01048580;AGCD01048581;DQ826531;GBDJ01017709;XM_005397842 ABI22175;XP_005397899 MODEL 9041705 ncrna LOC102010245 uncharacterized LOC102010245 NW_004955468 7542624 7555442 + 102010245 AGCD01052002;GBDF01145028;XR_263402 MODEL 39134425 misc_rna 7SK 7SK RNA 8944925 protein-coding Ap1s1 adaptor related protein complex 1 subunit sigma 1 INVOLVED IN response to virus (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); intrahepatic cholestasis (ortholog); FOUND IN Golgi apparatus (ortholog); presynapse (ortholog); terminal bouton (ortholog) NW_004955456 16127877 16134039 - 102026945 AGCD01046690;GBCB01008302;XM_005396868;XM_005396869 XP_005396925;XP_005396926 MODEL 8897593 protein-coding Gpr26 G protein-coupled receptor 26 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog); thymoma (ortholog) NW_004955477 1769585 1789838 + 102027405 AGCD01055509;AGCD01055510;XM_005401962 XP_005402019 MODEL 8730608 protein-coding LOC102004360 RB-associated KRAB zinc finger protein NW_004955460 10721784 10738710 - 102004360 AGCD01048602;GBDF01153023;XM_005397845;XM_005397846;XM_013521129;XM_013521131;XM_013521132 XP_005397902;XP_005397903;XP_013376583;XP_013376585;XP_013376586 MODEL 8941654 protein-coding Chrna4 cholinergic receptor nicotinic alpha 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); B cell activation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) NW_004955528 825314 840994 + 102015046 AGCD01069547;GBDJ01273817;XM_005409981 XP_005410038 MODEL 8828788 protein-coding LOC102011006 olfactory receptor 2T11 NW_004955418 30157574 30163444 - 102011006 AGCD01019506;XM_005382367 XP_005382424 MODEL 9029519 protein-coding Cfap221 cilia and flagella associated protein 221 ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); motile cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955459 10070827 10192411 - 102018900 AGCD01048179;AGCD01048180;AGCD01048181;GBDJ01164802;XM_005397660;XM_005397661;XM_013521060 XP_005397717;XP_005397718;XP_013376514 MODEL 8800159 protein-coding Derl1 derlin 1 ENCODES a protein that exhibits ATPase binding (ortholog); identical protein binding (ortholog); MHC class I protein binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); cellular response to unfolded protein (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN ATPase complex (ortholog); Derlin-1 retrotranslocation complex (ortholog); Derlin-1-VIMP complex (ortholog) NW_004955540 1918230 1944186 - 102025511 AGCD01071308;GBCE01054838;XM_005410910 XP_005410967 MODEL 39131981 rrna 5S_rRNA 5S ribosomal RNA 8938572 protein-coding Ak8 adenylate kinase 8 ENCODES a protein that exhibits AMP binding (ortholog); AMP kinase activity (ortholog); dCMP kinase activity (ortholog); INVOLVED IN ventricular system development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); hydrocephalus (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); sperm flagellum (ortholog) NW_004955513 2069187 2185469 - 102029775 AGCD01066868;AGCD01066869;AGCD01066870;GBBH01062292;XM_005408390;XM_013506604;XM_013506605 XP_005408447;XP_013362058;XP_013362059 MODEL 8806603 pseudo LOC102012649 pre-mRNA-splicing factor SLU7 pseudogene NW_004955481 9058890 9071635 + 102012649 AGCD01057094 MODEL 10304104 protein-coding Cdr1 cerebellar degeneration related 1 NW_004955489 4529580 4553732 + 106146645 AGCD01059906;AGCD01059907;AGCD01059908;GBDI01236035;XM_013504456 XP_013359910 MODEL 8970682 protein-coding Ccdc121 coiled-coil domain containing 121 NW_004955469 7771788 7774261 + 102006565 AGCD01052432;GBCE01049803;XM_005400410 XP_005400467 MODEL 8785176 protein-coding Fbxl15 F-box and leucine rich repeat protein 15 INVOLVED IN bone mineralization (ortholog); G2/M transition of mitotic cell cycle (ortholog); positive regulation of BMP signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955485 7977222 7979246 - 102018401 AGCD01058684;AGCD01058685;GBBH01035377;GBDF01251761;XM_013504083 XP_013359537 MODEL 153211025 protein-coding C2orf81 chromosome 2 open reading frame 81 8880790 protein-coding Il12a interleukin 12A ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-12 beta subunit binding (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); Chronic Hepatitis B (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955448 10611131 10617911 + 102022032 AGCD01041496;GBCE01162263;GBDK01148444;XM_005393161 XP_005393218 MODEL 8739978 protein-coding LOC102007971 keratin-associated protein 20-2-like NW_004955407 30174961 30175134 + 102007971 AGCD01007628;XM_005375643 XP_005375700 MODEL 8933022 protein-coding Bpifc BPI fold containing family C ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); stomach cancer (ortholog) NW_004955405 41376471 41403410 - 102028820 AGCD01005549;GBCC01004323;GBDI01161130;XM_013519152 XP_013374606 MODEL 39132215 rrna 5S_rRNA 5S ribosomal RNA 8777765 protein-coding Kbtbd8 kelch repeat and BTB domain containing 8 INVOLVED IN neural crest cell development (ortholog); neural crest formation (ortholog); protein monoubiquitination (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); Golgi apparatus (ortholog) NW_004955421 20685884 20698409 - 102015529 AGCD01022094;GBDF01085805;XM_005383820 XP_005383877 MODEL 8738928 protein-coding Adgrl1 adhesion G protein-coupled receptor L1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); G protein-coupled receptor activity (ortholog); latrotoxin receptor activity (ortholog); INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); DEVELOPMENTAL DELAY, BEHAVIORAL ABNORMALITIES, AND NEUROPSYCHIATRIC DISORDERS (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) NW_004955415 32849066 32883628 - 102011653 AGCD01016737;AGCD01016738;GBDK01083473;XM_005381088;XM_005381089;XM_013512288 XP_005381145;XP_005381146;XP_013367742 MODEL 8828800 protein-coding Gata5 GATA binding protein 5 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cardiac jelly development (ortholog); cellular response to BMP stimulus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); aortic valve disease (ortholog); ARTERIAL DISSECTION (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955528 1595231 1604979 + 102012999 AGCD01069566;GBDJ01420985;XM_005410057 XP_005410114 MODEL 39134119 misc_rna 7SK 7SK RNA 39133861 misc_rna 7SK 7SK RNA 39133987 misc_rna 7SK 7SK RNA 10287355 protein-coding LOC106149895 uncharacterized LOC106149895 NW_004955456 15265845 15274439 - 106149895 AGCD01046666;GBDK01143761;XM_013520636 XP_013376090 MODEL 8846680 pseudo LOC102021598 leucine-rich repeat and coiled-coil domain-containing protein 1-like NW_004955439 541151 543625 + 102021598 AGCD01035585 MODEL 8854321 protein-coding Cap1 cyclase associated actin cytoskeleton regulatory protein 1 INVOLVED IN actin cytoskeleton organization (ortholog); ameboidal-type cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955452 17503530 17528049 + 102004448 AGCD01044558;AGCD01044559;GBDF01010423;XM_005395275;XM_005395276;XM_005395277;XM_013519550 XP_005395332;XP_005395333;XP_005395334;XP_013375004 MODEL 8726572 pseudo LOC102003988 PEST proteolytic signal-containing nuclear protein pseudogene NW_004955505 1483191 1484367 + 102003988 AGCD01064974;XM_005407108 MODEL 9060773 protein-coding Hpd 4-hydroxyphenylpyruvate dioxygenase ENCODES a protein that exhibits 4-hydroxyphenylpyruvate dioxygenase activity (ortholog); iron ion binding (ortholog); mRNA m(6)A methyltransferase activity (ortholog); INVOLVED IN L-tyrosine catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955482 6586975 6595034 + 102010484 AGCD01057403;GBDF01017484;XM_005403106 XP_005403163 MODEL 8988706 protein-coding Trex1 three prime repair exonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); adenyl deoxyribonucleotide binding (ortholog); INVOLVED IN activation of immune response (ortholog); adaptive immune response (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN DNA replication pathway; G2/M DNA damage checkpoint pathway; ASSOCIATED WITH Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 1 (ortholog); brain disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955532 533877 535767 + 102025941 AGCD01070130;GBBH01050782;XM_005410151 XP_005410208 MODEL 8888306 protein-coding Abcd4 ATP binding cassette subfamily D member 4 ENCODES a protein that exhibits ABC-type vitamin B12 transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cobalamin metabolic process (ortholog); cobalamin transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); brain disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog); peroxisome (ortholog) NW_004955523 1170306 1181352 + 102019945 AGCD01068504;GBBH01088354;GBCE01076781;XM_013507174;XM_013507176;XM_013507177;XR_001231940 XP_013362628;XP_013362630;XP_013362631 MODEL 8785823 protein-coding LOC102017529 uncharacterized LOC102017529 NW_004955404 1839048 1853901 - 102017529 AGCD01003231;GBCE01108327;XM_013516796 XP_013372250 MODEL 8953706 protein-coding Clec11a C-type lectin domain containing 11A ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH anemia (ortholog); carotid stenosis (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955559 515341 517521 - 102015160 AGCD01073590;GBCE01000034;XM_005412772 XP_005412829 MODEL 8923815 protein-coding LOC102003667 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7690774 7703651 - 102003667 AGCD01062160;GBDI01129621;XM_013505322;XM_013505323 XP_013360776;XP_013360777 MODEL 9041909 protein-coding Efcab6 EF-hand calcium binding domain 6 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 28569080 28783455 - 102018278 AGCD01014561;AGCD01014562;AGCD01014563;AGCD01014564;AGCD01014565;AGCD01014566;AGCD01014567;GBDF01009010;XM_005379444;XM_005379445 XP_005379501;XP_005379502 MODEL 9065642 pseudo LOC102009452 serine/arginine repetitive matrix protein 1 pseudogene NW_004955451 7812936 7823923 - 102009452 AGCD01043254 MODEL 8808610 protein-coding Atox1 antioxidant 1 copper chaperone ENCODES a protein that exhibits ATPase binding (ortholog); copper chaperone activity (ortholog); copper ion binding (ortholog); INVOLVED IN copper ion export (ortholog); copper ion transport (ortholog); intracellular copper ion homeostasis (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); Chronic Hepatitis (ortholog) NW_004955408 6156334 6168423 - 102023557 AGCD01008164;GBDF01002335;XM_005376170 XP_005376227 MODEL 8743562 protein-coding Cnot9 CCR4-NOT transcription complex subunit 9 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN CCR4-NOT complex (ortholog); nucleus (ortholog); P-body (ortholog) NW_004955453 14819007 14845879 - 102009142 AGCD01044875;GBBH01207555;XM_005395642;XM_005395643 XP_005395699;XP_005395700 MODEL 8884636 pseudo LOC102009093 60S ribosomal protein L5-like NW_004955431 17585076 17587986 - 102009093 AGCD01030409 MODEL 8791564 protein-coding Itga9 integrin subunit alpha 9 ENCODES a protein that exhibits collagen binding (ortholog); integrin binding involved in cell-matrix adhesion (ortholog); laminin binding (ortholog); INVOLVED IN cell adhesion (ortholog); negative regulation of vasoconstriction (ortholog); neutrophil chemotaxis (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebral infarction (ortholog); colon adenocarcinoma (ortholog); FOUND IN basal plasma membrane (ortholog); integrin alpha9-beta1 complex (ortholog) NW_004955421 4331053 4663101 + 102028762 AGCD01021690;AGCD01021691;AGCD01021692;AGCD01021693;AGCD01021694;AGCD01021695;AGCD01021696;GBBH01222011;GBDK01193627;XM_013513777 XP_013369231 MODEL 8820311 ncrna LOC102008342 uncharacterized LOC102008342 NW_004955432 20887908 20912192 - 102008342 AGCD01031210;GBDF01207508;XR_261537 MODEL 8766000 protein-coding Ccl5 C-C motif chemokine ligand 5 ENCODES a protein that exhibits CCR1 chemokine receptor binding (ortholog); CCR5 chemokine receptor binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell-cell signaling (ortholog); cellular response to alkyl hydroperoxide (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955481 10293758 10301118 - 102022390 AGCD01057139;GBDK01092156;XM_005402897 XP_005402954 MODEL 8863651 protein-coding Amz2 archaelysin family metallopeptidase 2 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955478 4477597 4485918 - 102029394 AGCD01055851;GBCQ01064160;XM_005402126;XM_005402131;XM_013503246;XM_013503247;XM_013503248;XM_013503249 XP_005402183;XP_005402188;XP_013358700;XP_013358701;XP_013358702;XP_013358703 MODEL 8939467 protein-coding Actbl2 actin beta like 2 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) NW_004955446 10508647 10509777 + 102010645 AGCD01040183;XM_005392677;XM_005392678 XP_005392734;XP_005392735 MODEL 8952934 protein-coding Cd84 CD84 molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of granulocyte macrophage colony-stimulating factor production (ortholog); negative regulation of interleukin-10 production (ortholog); negative regulation of interleukin-18 production (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 12280467 12313976 - 102019259 AGCD01052149;GBDI01339680;XM_005400211 XP_005400268 MODEL 9021950 pseudo LOC102010247 S-phase kinase-associated protein 1 pseudogene NW_004955413 5920746 5923360 + 102010247 AGCD01013695 MODEL 39134426 misc_rna 7SK 7SK RNA 8923839 pseudo LOC102004361 rRNA-processing protein FCF1 homolog NW_004955409 37449725 37450930 + 102004361 AGCD01010519 MODEL 8772552 ncrna LOC102006486 uncharacterized LOC102006486 NW_004955429 12941851 12943908 - 102006486 AGCD01028733;GBDI01366543;XR_261327 MODEL 8699556 protein-coding Ephx2 epoxide hydrolase 2 ENCODES a protein that exhibits 10-hydroxy-9-(phosphonooxy)octadecanoate phosphatase activity (ortholog); epoxide hydrolase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); dephosphorylation (ortholog); epoxide metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisome (ortholog) NW_004955403 49999563 50038800 + 102005434 AGCD01002954;AGCD01002955;GBBH01062366;XM_005373744 XP_005373801 MODEL 8744555 protein-coding Dusp7 dual specificity phosphatase 7 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of MAP kinase activity (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955532 3685137 3691933 - 102026152 AGCD01070294;GBCB01023261;GBCE01096661;XM_005410343 XP_005410400 MODEL 8968201 protein-coding LOC102011390 kynurenine/alpha-aminoadipate aminotransferase, mitochondrial-like NW_004955403 36263930 36284758 + 102011390 AGCD01002535;AGCD01002536;GBCQ01008057;GBCQ01008066;XM_013513334 XP_013368788 MODEL 8845519 protein-coding LOC102006839 zinc finger protein 709-like NW_004955569 1394409 1414793 + 102006839 AGCD01074651;AGCD01074652;AGCD01074653;AGCD01074654;GBDF01150811;XM_005413501 XP_005413558 MODEL 8890822 protein-coding Eln elastin ENCODES a protein that exhibits extracellular matrix binding (ortholog); extracellular matrix constituent conferring elasticity (ortholog); INVOLVED IN aorta development (ortholog); aortic valve morphogenesis (ortholog); blood vessel remodeling (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Anetoderma (ortholog); anxiety disorder (ortholog); FOUND IN elastic fiber (ortholog); extracellular region (ortholog) NW_004955456 13788992 13818836 - 102020983 AGCD01046622;AGCD01046623;GBDF01022221;XM_013520582;XM_013520583;XM_013520584;XM_013520585;XM_013520586;XM_013520587;XM_013520588;XM_013520589;XM_013520590;XM_013520591;XM_013520592;XM_013520593 XP_013376036;XP_013376037;XP_013376038;XP_013376039;XP_013376040;XP_013376041;XP_013376042;XP_013376043;XP_013376044;XP_013376045;XP_013376046;XP_013376047 MODEL 8770891 protein-coding Ak9 adenylate kinase 9 ENCODES a protein that exhibits AMP kinase activity (ortholog); CMP kinase activity (ortholog); dAMP kinase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955402 704 128521 - 102003075 AGCD01000001;AGCD01000002;AGCD01000003;AGCD01000004;AGCD01000005;AGCD01000006;AGCD01000007;AGCD01000008;GBDF01190641;XM_005372536;XM_005372537;XM_005372538;XM_005372541;XM_005372542;XM_013512310;XM_013512375 XP_005372593;XP_005372594;XP_005372595;XP_005372598;XP_005372599;XP_013367764;XP_013367829 MODEL 8783574 protein-coding Derl2 derlin 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signal recognition particle binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955467 10824922 10837408 - 102012520 AGCD01051585;AGCD01051586;GBCC01027755;GBDI01134494;XM_013522214 XP_013377668 MODEL 8993252 protein-coding LOC102005404 olfactory receptor 5L1-like NW_004955511 647139 648068 + 102005404 AGCD01066337;XM_005408203 XP_005408260 MODEL 8800654 ncrna LOC102012650 uncharacterized LOC102012650 NW_004955418 28431582 28460778 - 102012650 AGCD01019438;AGCD01019439;GBDI01285082;XR_001233482;XR_260593 MODEL 9015673 protein-coding Ccdc122 coiled-coil domain containing 122 ASSOCIATED WITH Breast Cancer, Familial (ortholog); leprosy (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955518 1746832 1776266 - 102009411 AGCD01067763;GBDF01238412;XM_005409072 XP_005409129 MODEL 9043144 protein-coding Cdr2 cerebellar degeneration related protein 2 INVOLVED IN alpha-beta T cell activation involved in immune response (ortholog); cell activation (ortholog); T cell anergy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955493 982559 1006117 - 102012770 AGCD01060873;AGCD01060874;AGCD01060875;GBDF01074692;GBDK01280802;XM_013504851 XP_013360305 MODEL 8719081 protein-coding C3 complement C3 ENCODES a protein that exhibits antigen binding (ortholog); C5L2 anaphylatoxin chemotactic receptor binding (ortholog); chemokine activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); B cell activation (ortholog); complement activation (ortholog); PARTICIPATES IN classical complement pathway; ASSOCIATED WITH otitis media; acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cell surface (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); cytoplasmic side of Golgi membrane (ortholog) NW_004955495 2796601 2824233 + 102006475 AGCD01061799;AGCD01061800;AGCD01061801;AGCD01061802;GBDJ01009718;XM_005405700 XP_005405757 MODEL 10098298 protein-coding Gpr27 G protein-coupled receptor 27 INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955421 16352643 16353094 - 106148423 AGCD01021998;GBCE01104270;GBDJ01170215;XM_013513673 XP_013369127 MODEL 8755528 protein-coding LOC102011010 steroid 17-alpha-hydroxylase/17,20 lyase ENCODES a protein that exhibits heme binding (ortholog); steroid 17-alpha-monooxygenase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); androgen biosynthetic process (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH 17,20-Lyase Deficiency, Isolated (ortholog); amenorrhea (ortholog); breast cancer (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); endoplasmic reticulum (ortholog) NW_004955485 7615132 7652899 + 102011010 AGCD01058665;AGCD01058666;AGCD01058667;AGCD01058668;AGCD01058669;GBDF01163210;XM_005403822 XP_005403879 MODEL 8710415 protein-coding Ica1l islet cell autoantigen 1 like INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955457 11983201 12085870 + 102005670 AGCD01046997;AGCD01046998;AGCD01046999;GBDF01125399;XM_005397050;XM_005397051;XM_005397052;XM_005397053;XM_005397054 XP_005397107;XP_005397108;XP_005397109;XP_005397110;XP_005397111 MODEL 9008699 ncrna LOC102007974 uncharacterized LOC102007974 NW_004955462 12999013 13022290 + 102007974 AGCD01049421;GBDF01013996;XR_263132 MODEL 39132217 rrna 5S_rRNA 5S ribosomal RNA 9002759 protein-coding Abce1 ATP binding cassette subfamily E member 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); CTPase activity (ortholog); endoribonuclease inhibitor activity (ortholog); INVOLVED IN negative regulation of endoribonuclease activity (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955428 1029909 1058902 + 102029644 AGCD01027598;AGCD01027599;GBDF01121311;XM_005386633 XP_005386690 MODEL 8907784 protein-coding Fbxl16 F-box and leucine rich repeat protein 16 ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955442 16498903 16510640 + 102018993 AGCD01037901;GBDJ01164561;XM_005391616 XP_005391673 MODEL 9051121 protein-coding Ap1s2 adaptor related protein complex 1 subunit sigma 2 INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); neuromuscular process controlling balance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955519 2351754 2370650 + 102010189 AGCD01067925;AGCD01067926;AGCD01067927;AGCD01067928;GBCB01043995;GBDK01233175;XM_005409152 XP_005409209 MODEL 9018271 protein-coding Il12b interleukin 12B ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); ankylosing spondylitis (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955408 13302506 13316300 - 102021422 AGCD01008352;GBBH01220378;XM_005376251 XP_005376308 MODEL 39134120 misc_rna 7SK 7SK RNA 39133862 misc_rna 7SK 7SK RNA 9025663 protein-coding Adgrl2 adhesion G protein-coupled receptor L2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN excitatory synapse assembly (ortholog); response to bacterium (ortholog); synapse organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) NW_004955423 11789313 12062478 - 102008638 AGCD01023705;AGCD01023706;AGCD01023707;AGCD01023708;AGCD01023709;AGCD01023710;GBDK01090032;XM_013514474;XM_013514475;XM_013514476;XM_013514477;XM_013514478;XM_013514479;XM_013514480;XM_013514481;XM_013514482;XM_013514483;XM_013514484;XM_013514485 XP_013369928;XP_013369929;XP_013369930;XP_013369931;XP_013369932;XP_013369933;XP_013369934;XP_013369935;XP_013369936;XP_013369937;XP_013369938;XP_013369939 MODEL 8803977 protein-coding Cfap251 cilia and flagella associated protein 251 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Asthenozoospermia (ortholog); cervical cancer (ortholog); FOUND IN sperm end piece (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955482 6508563 6553561 - 102030197 AGCD01057399;AGCD01057400;AGCD01057401;AGCD01057402;GBDF01005425;GBDJ01271432;XM_013503582 XP_013359036 MODEL 39133988 misc_rna 7SK 7SK RNA 39131982 rrna 5S_rRNA 5S ribosomal RNA 9027873 pseudo LOC102021601 nuclear receptor coactivator 1-like NW_004955546 2922210 2926579 + 102021601 AGCD01072106 MODEL 8794318 protein-coding Cap2 cyclase associated actin cytoskeleton regulatory protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); regulation of modification of postsynaptic actin cytoskeleton (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); dilated cardiomyopathy (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); postsynaptic density (ortholog) NW_004955483 8484427 8602748 - 102023267 AGCD01057837;AGCD01057838;AGCD01057839;GBDI01292666;XM_005403406 XP_005403463 MODEL 8881085 protein-coding Itgad integrin subunit alpha D ENCODES a protein that exhibits cell adhesion receptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell-cell adhesion mediated by integrin (ortholog); heterotypic cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung adenocarcinoma (ortholog); FOUND IN integrin alphaD-beta2 complex (ortholog); plasma membrane (ortholog) NW_004955493 8233098 8260613 + 102005814 AGCD01061282;GBDF01233175;XM_013504860 XP_013360314 MODEL 9019357 protein-coding Chrna5 cholinergic receptor nicotinic alpha 5 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral response to nicotine (ortholog); cellular response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) NW_004955450 945400 974129 + 102012488 AGCD01042346;GBBH01226333;XM_005393456;XM_005393457;XM_013518824;XM_013518825 XP_005393513;XP_005393514;XP_013374278;XP_013374279 MODEL 8874000 protein-coding Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 ENCODES a protein that exhibits 3'(2'),5'-bisphosphate nucleotidase activity (ortholog); inositol-1,4-bisphosphate 1-phosphatase activity (ortholog); magnesium ion binding (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); familial hypercholesterolemia (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955520 3521096 3543255 + 102023516 AGCD01068105;GBDF01128212;XM_005409271;XM_005409272;XM_005409273;XM_005409274;XM_005409275;XR_264596 XP_005409328;XP_005409329;XP_005409330;XP_005409331;XP_005409332 MODEL 8957889 protein-coding Cnp 2'',3''-cyclic nucleotide 3'' phosphodiesterase ENCODES a protein that exhibits 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axonogenesis (ortholog); forebrain development (ortholog); ASSOCIATED WITH achondroplasia (ortholog); alcoholic liver cirrhosis (ortholog); Alzheimer's disease (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955451 16115137 16119261 + 102009567 AGCD01043655;GBBH01089950;XM_013519285 XP_013374739 MODEL 8890226 protein-coding Trex2 three prime repair exonuclease 2 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); DNA binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN DNA metabolic process (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); intellectual disability (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955580 207903 209426 - 102010534 AGCD01075591;GBDF01123808;XM_005414119 XP_005414176 MODEL 8868627 protein-coding Kcmf1 potassium channel modulatory factor 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN HRI-mediated signaling (ortholog); negative regulation of HRI-mediated signaling (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); late endosome (ortholog) NW_004955424 2348170 2412488 - 102007570 AGCD01024277;AGCD01024278;GBDI01216420;XM_005385444;XM_005385445;XM_013514687;XM_013514688;XM_013514689 XP_005385501;XP_005385502;XP_013370141;XP_013370142;XP_013370143 MODEL 8991410 pseudo LOC102003668 uncharacterized LOC102003668 NW_004955423 22908358 22973034 - 102003668 AGCD01023981;AGCD01023982;AGCD01023983;AGCD01023984;AGCD01023985;AGCD01023986 MODEL 8925343 ncrna LOC102003990 uncharacterized LOC102003990 NW_004955428 13288412 13293352 + 102003990 AGCD01027947;GBDF01181697;XR_001234443;XR_261302 MODEL 9023949 protein-coding Hpdl 4-hydroxyphenylpyruvate dioxygenase like ENCODES a protein that exhibits 4-hydroxymandelate synthase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 83 (ortholog); Muscle Hypotonia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955464 12936996 12940050 - 102005016 AGCD01050240;AGCD01050241;GBBH01049855;XM_013521662 XP_013377116 MODEL 8882916 protein-coding Clec12b C-type lectin domain family 12 member B ENCODES a protein that exhibits protein phosphatase binding (ortholog); signaling receptor inhibitor activity (ortholog); INVOLVED IN melanocyte proliferation (ortholog); natural killer cell inhibitory signaling pathway (ortholog); negative regulation of natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955413 7842994 7852685 + 102010143 AGCD01013834;GBDF01005000;XM_005378942;XM_005378943 XP_005378999;XP_005379000 MODEL 8810372 ncrna LOC102006489 uncharacterized LOC102006489 NW_004955432 19124642 19126210 + 102006489 AGCD01031169;GBDI01387174;XR_261535 MODEL 9024009 ncrna LOC102009454 uncharacterized LOC102009454 NW_004955452 11752081 11769463 + 102009454 AGCD01044343;GBCB01079032;XR_262680 MODEL 8826422 protein-coding Efcab7 EF-hand calcium binding domain 7 INVOLVED IN positive regulation of protein import into nucleus (ortholog); positive regulation of protein localization to ciliary membrane (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955423 26473310 26510704 - 102004495 AGCD01024097;GBCB01077144;XM_005385327;XM_005385328;XM_005385329;XM_005385330 XP_005385384;XP_005385385;XP_005385386;XP_005385387 MODEL 8800273 protein-coding Atp10a ATPase phospholipid transporting 10A (putative) ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); glycosylceramide flippase activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN positive regulation of membrane tubulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); phospholipid-translocating ATPase complex (ortholog) NW_004955533 3413607 3533834 + 102004971 AGCD01070420;AGCD01070421;AGCD01070422;GBBH01209305;GBDF01088495;XM_005410422 XP_005410479 MODEL 8983901 protein-coding LOC102010250 mitochondrial ornithine transporter 2 NW_004955415 12462640 12463852 + 102010250 AGCD01016197;GBDF01083463;XM_005380737 XP_005380794 MODEL 8721971 protein-coding Lgals8 galectin 8 ENCODES a protein that exhibits carbohydrate binding (ortholog); integrin binding (ortholog); INVOLVED IN cellular response to virus (ortholog); lymphatic endothelial cell migration (ortholog); plasma cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955492 3673233 3693777 - 102017993 AGCD01060699;GBBH01093652;XM_005404932;XM_005404934;XM_005404935;XM_005404936;XM_013504707;XM_013504708;XM_013504709 XP_005404989;XP_005404991;XP_005404992;XP_005404993;XP_013360161;XP_013360162;XP_013360163 MODEL 10377279 protein-coding LOC106149896 polycystic kidney disease protein 1-like 1 NW_004955456 5478010 5496105 + 106149896 AGCD01046330;AGCD01046331;AGCD01046332;GBDI01253281;XM_013520638 XP_013376092 MODEL 8786186 ncrna LOC102009094 uncharacterized LOC102009094 NW_004955432 20999224 21001060 + 102009094 AGCD01031213;GBDF01304667;XR_261541 MODEL 8722832 protein-coding Eloa elongin A INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN elongin complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 3668868 3681506 + 102018252 AGCD01043934;GBDF01087483;XM_013519496 XP_013374950 MODEL 8769827 ncrna LOC102017530 uncharacterized LOC102017530 NW_004955452 3571075 3600205 + 102017530 AGCD01043930;AGCD01043931;GBDI01141659;XR_001236010;XR_262646 MODEL 39134427 misc_rna 7SK 7SK RNA 8982825 protein-coding Gatad1 GATA zinc finger domain containing 1 INVOLVED IN chromatin remodeling (ortholog); ASSOCIATED WITH dilated cardiomyopathy 2B (ortholog); Heimler syndrome 1 (ortholog); infantile Refsum disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955432 9389020 9398791 + 102003477 AGCD01030905;GBCQ01006270;GBDF01053561;XM_013515936 XP_013371390 MODEL 8804149 pseudo LOC102008343 40S ribosomal protein S6 pseudogene NW_004955515 3520030 3520862 + 102008343 AGCD01067288 MODEL 8970189 protein-coding Ephx3 epoxide hydrolase 3 ENCODES a protein that exhibits epoxide hydrolase activity (ortholog); INVOLVED IN epoxide metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN membrane (ortholog) NW_004955495 7995979 8001423 + 102009853 AGCD01062174;GBDK01360091;XM_005406086;XM_013505126;XM_013505127 XP_005406143;XP_013360580;XP_013360581 MODEL 8839559 protein-coding Abcf1 ATP binding cassette subfamily F member 1 ENCODES a protein that exhibits ATP binding (ortholog); ribosome binding (ortholog); translation activator activity (ortholog); INVOLVED IN positive regulation of translation (ortholog); ribosome biogenesis (ortholog); translational initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear envelope (ortholog) NW_004955583 600381 607211 + 102004131 AGCD01075841;AGCD01075842;GBCE01052609;GBDK01129598;XM_013509796;XM_013509797 XP_013365250;XP_013365251 MODEL 8870400 pseudo LOC102011391 dnaJ homolog subfamily B member 6-like NW_004955451 11366508 11386075 + 102011391 AGCD01043350;AGCD01043351;AGCD01043352 MODEL 8723771 protein-coding Actc1 actin alpha cardiac muscle 1 ENCODES a protein that exhibits ATP binding (ortholog); microfilament motor activity (ortholog); myosin binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); actin-myosin filament sliding (ortholog); actomyosin structure organization (ortholog); ASSOCIATED WITH atrial heart septal defect 5 (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955416 2139541 2144678 - 102028962 AGCD01016849;GBDI01008524;XM_005381179 XP_005381236 MODEL 8975162 protein-coding Dusp8 dual specificity phosphatase 8 ENCODES a protein that exhibits phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway NW_004955476 10816647 10826787 + 102029618 AGCD01055431;GBCE01057397;GBDF01144903;XM_013503009 XP_013358463 MODEL 8738857 protein-coding LOC102004372 intelectin-1a NW_004955468 12649293 12708557 - 102004372 AGCD01052172;AGCD01052173;AGCD01052174;AGCD01052175;AGCD01052176;AGCD01052177;AGCD01052178;AGCD01052179;AGCD01052180;AGCD01052181;GBBH01135202;GBDF01177021;XM_013522493 XP_013377947 MODEL 8709558 protein-coding Cd86 CD86 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN B cell activation (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) NW_004955427 21375820 21436767 + 102024258 AGCD01027444;AGCD01027445;GBDK01357791;XM_013515233;XM_013515234;XM_013515236;XM_013515237 XP_013370687;XP_013370688;XP_013370690;XP_013370691 MODEL 8791883 protein-coding LOC102012651 olfactory receptor 5V1-like NW_004955418 30263575 30290368 + 102012651 AGCD01019508;AGCD01019509;AGCD01019510;AGCD01019511;XM_005382371 XP_005382428 MODEL 9043097 pseudo LOC102010252 60S ribosomal protein L35a pseudogene NW_004955475 5564528 5564859 + 102010252 AGCD01054922 MODEL 8817665 protein-coding Anapc1 anaphase promoting complex subunit 1 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) NW_004955470 2182163 2262804 + 102029282 AGCD01052673;GBDF01126892;XM_005400611;XM_005400612;XM_005400613;XM_005400614 XP_005400668;XP_005400669;XP_005400670;XP_005400671 MODEL 8994969 ncrna LOC102011013 uncharacterized LOC102011013 NW_004955487 9073542 9074205 + 102011013 AGCD01059449;AGCD01059450;GBDF01127916;XR_263991 MODEL 9001027 protein-coding Itgae integrin subunit alpha E PARTICIPATES IN E-cadherin signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); integrin alphaE-beta7 complex (ortholog) NW_004955467 13052920 13112896 + 102018705 AGCD01051664;AGCD01051665;AGCD01051666;GBBH01214816;XM_005399709;XM_013522229;XM_013522230 XP_005399766;XP_013377683;XP_013377684 MODEL 8875411 ncrna LOC102007976 uncharacterized LOC102007976 NW_004955465 144325 179094 + 102007976 AGCD01050304;GBDF01285865;XR_263226 MODEL 8712078 protein-coding Ccm2 CCM2 scaffold protein INVOLVED IN blood vessel development (ortholog); blood vessel endothelial cell differentiation (ortholog); cell-cell junction organization (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cavernous hemangioma (ortholog); Central Nervous System Vascular Malformations (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955456 7232224 7251012 - 102015078 AGCD01046401;GBDJ01137048;GBDJ01137052;XM_013520603 XP_013376057 MODEL 8913267 protein-coding LOC102005406 uncharacterized LOC102005406 NW_004955514 858595 900031 - 102005406 AGCD01067024;AGCD01067025;GBBH01100117;XM_013506745 XP_013362199 MODEL 8709730 protein-coding Icam1 intercellular adhesion molecule 1 ENCODES a protein that exhibits integrin binding (ortholog); protein-containing complex binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); canonical NF-kappaB signal transduction (ortholog); cell adhesion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; pro-inflammatory cytokine mediated pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) NW_004955495 1561464 1573282 + 102029873 AGCD01061701;AGCD01061702;AGCD01061703;GBDK01022433;XM_005405586;XM_005405587 XP_005405643;XP_005405644 MODEL 39132219 rrna 5S_rRNA 5S ribosomal RNA 8964898 protein-coding Derl3 derlin 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signal recognition particle binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955455 8415868 8418753 + 102010869 AGCD01045891;GBDI01131857;XM_005396416;XM_005396417 XP_005396473;XP_005396474 MODEL 39134121 misc_rna 7SK 7SK RNA 39133863 misc_rna 7SK 7SK RNA 8848182 protein-coding Il12rb1 interleukin 12 receptor subunit beta 1 ENCODES a protein that exhibits coreceptor activity (ortholog); cytokine binding (ortholog); interleukin-12 receptor activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); interleukin-12-mediated signaling pathway (ortholog); interleukin-23-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); asthma (ortholog); FOUND IN external side of plasma membrane (ortholog); interleukin-12 receptor complex (ortholog); interleukin-23 receptor complex (ortholog) NW_004955524 3276932 3299617 + 102011474 AGCD01068876;AGCD01068877;AGCD01068878;AGCD01068879;GBBH01019037;GBDF01252409;XM_013507268 XP_013362722 MODEL 39133989 misc_rna 7SK 7SK RNA 8926856 protein-coding Adgrl3 adhesion G protein-coupled receptor L3 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion mediator activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell-cell adhesion (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN anchoring junction (ortholog); axon (ortholog); cell-cell junction (ortholog) NW_004955447 9912679 10708743 - 102017720 AGCD01040866;AGCD01040867;AGCD01040868;AGCD01040869;AGCD01040870;AGCD01040871;AGCD01040872;AGCD01040873;AGCD01040874;AGCD01040875;AGCD01040876;AGCD01040877;AGCD01040878;AGCD01040879;AGCD01040880;AGCD01040881;AGCD01040882;AGCD01040883;AGCD01040884;AGCD01040885;AGCD01040886;AGCD01040887;GBCB01124366;XM_005392854;XM_005392856;XM_005392857;XM_005392859;XM_005392861;XM_005392862;XM_005392863;XM_013518568;XM_013518569;XM_013518570;XM_013518571 XP_005392911;XP_005392913;XP_005392914;XP_005392916;XP_005392918;XP_005392919;XP_005392920;XP_013374022;XP_013374023;XP_013374024;XP_013374025 MODEL 39131983 rrna 5S_rRNA 5S ribosomal RNA 8783802 ncrna LOC102021603 uncharacterized LOC102021603 NW_004955442 5816330 5828896 + 102021603 AGCD01037570;XR_262117 MODEL 8734890 protein-coding LOC102006842 arylacetamide deacetylase-like NW_004955448 3066739 3077788 + 102006842 AGCD01041301;GBDJ01144113;XM_005393038 XP_005393095 MODEL 39131311 protein-coding AP1S2 adaptor related protein complex 1 subunit sigma 2 8757948 protein-coding C3ar1 complement C3a receptor 1 ENCODES a protein that exhibits complement component C3a binding (ortholog); complement component C3a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); complement receptor mediated signaling pathway (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 6707003 6715689 - 102028398 AGCD01013772;GBBH01222006;XM_005378913;XM_005378914;XM_005378915;XM_013511497;XM_013511498 XP_005378970;XP_005378971;XP_005378972;XP_013366951;XP_013366952 MODEL 9012658 protein-coding Ccdc124 coiled-coil domain containing 124 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); midbody (ortholog); plasma membrane (ortholog) NW_004955524 3349444 3355748 - 102016947 AGCD01068886;AGCD01068887;AGCD01068888;GBCQ01033885;XM_005409551 XP_005409608 MODEL 8740972 protein-coding Cfap263 cilia and flagella associated protein 263 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); protein-containing complex (ortholog) NW_004955433 15750921 15775466 + 102011576 AGCD01031764;AGCD01031765;GBDF01190993;XM_005388436;XM_005388437;XM_013516275 XP_005388493;XP_005388494;XP_013371729 MODEL 9043353 protein-coding Cnppd1 cyclin Pas1/PHO80 domain containing 1 ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog) NW_004955453 14263619 14270701 + 102021086 AGCD01044860;AGCD01044861;GBDF01081252;XM_005395584;XM_005395585 XP_005395641;XP_005395642 MODEL 8736566 protein-coding Cdr2l cerebellar degeneration related protein 2 like ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955553 1851338 1863772 + 102018231 AGCD01072902;AGCD01072903;GBBH01107303;GBDF01048762;XM_005412266 XP_005412323 MODEL 8737732 protein-coding Chrna6 cholinergic receptor nicotinic alpha 6 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral response to nicotine (ortholog); membrane depolarization (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol use disorder (ortholog); Breast Cancer, Familial (ortholog); cocaine abuse (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); dopaminergic synapse (ortholog); postsynaptic membrane (ortholog) NW_004955536 166212 172551 + 102022426 AGCD01070716;AGCD01070717;XM_013507721 XP_013363175 MODEL 8994864 pseudo LOC102006491 ferritin heavy chain-like NW_004955434 1171311 1191802 + 102006491 AGCD01032056;AGCD01032057 MODEL 8996401 protein-coding LOC102009461 immunoglobulin omega chain-like NW_004955455 6648451 6649016 + 102009461 AGCD01045803;XM_005396575 XP_005396632 MODEL 8716957 protein-coding Hpgd 15-hydroxyprostaglandin dehydrogenase ENCODES a protein that exhibits 15-hydroxyprostaglandin dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); NAD binding (ortholog); INVOLVED IN ductus arteriosus closure (ortholog); female pregnancy (ortholog); kidney development (ortholog); ASSOCIATED WITH Arthralgia (ortholog); carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955403 32569841 32614860 + 102021932 AGCD01002436;AGCD01002437;AGCD01002438;GBCQ01010378;XM_005373533 XP_005373590 MODEL 10126340 ncrna LOC106149897 uncharacterized LOC106149897 NW_004955456 9449081 9464760 - 106149897 AGCD01046510;GBDF01306056;XR_001236363;XR_001236364 MODEL 8792298 ncrna LOC102003669 uncharacterized LOC102003669 NW_004955497 6927114 6931241 + 102003669 AGCD01062651;GBDF01281346;XR_264207;XR_264208 MODEL 616940622 protein-coding TRGC1 T cell receptor gamma constant 1 9010206 protein-coding Efcab8 EF-hand calcium binding domain 8 NW_004955422 28269996 28337345 - 102005054 AGCD01023345;GBDF01299149;XM_013514341;XM_013514342;XM_013514343;XM_013514344 XP_013369795;XP_013369796;XP_013369797;XP_013369798 MODEL 8717710 protein-coding Gpr3 G protein-coupled receptor 3 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger (ortholog); negative regulation of cell cycle (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); plasma membrane (ortholog) NW_004955452 6648470 6651938 + 102004233 AGCD01044118;GBDF01030401;XM_005394907;XM_005394908 XP_005394964;XP_005394965 MODEL 8836538 protein-coding Fbxl17 F-box and leucine rich repeat protein 17 INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein polyubiquitination (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955418 6314503 6758531 + 102025687 AGCD01018875;AGCD01018876;AGCD01018877;AGCD01018878;AGCD01018879;AGCD01018880;AGCD01018881;AGCD01018882;GBCE01085097;GBDJ01275606;XM_005382343 XP_005382400 MODEL 8877694 protein-coding Capg capping actin protein, gelsolin like ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); Flemming body (ortholog) NW_004955424 2064672 2080192 + 102003781 AGCD01024262;GBCE01000802;XM_005385432;XM_005385433;XM_005385434;XM_005385435 XP_005385489;XP_005385490;XP_005385491;XP_005385492 MODEL 9061503 protein-coding Akain1 A-kinase anchor inhibitor 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of protein-containing complex assembly (ortholog); FOUND IN cytosol (ortholog) NW_004955402 5814876 5864612 + 102011257 AGCD01000142;AGCD01000143;XM_005372642 XP_005372699 MODEL 8927881 protein-coding LOC102003991 olfactory receptor 10W1-like NW_004955511 3029816 3030835 + 102003991 AGCD01066439;GBDF01060938;XM_005408259 XP_005408316 MODEL 8736703 protein-coding Kcna1 potassium voltage-gated channel subfamily A member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); disordered domain specific binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN axon development (ortholog); brain development (ortholog); cell communication by electrical coupling (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); Abnormal Reflexes (ortholog); Ataxia (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955413 2703030 2711612 + 102006996 AGCD01013558;GBCB01010909;XM_005378744 XP_005378801 MODEL 39134428 misc_rna 7SK 7SK RNA 39132220 rrna 5S_rRNA 5S ribosomal RNA 8873723 protein-coding Elob elongin B ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); target-directed miRNA degradation (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Familial Prostate Cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); elongin complex (ortholog) NW_004955442 14498666 14501895 - 102015897 AGCD01037821;GBCQ01007574;GBDF01006908;XM_005391402 XP_005391459 MODEL 8973291 ncrna LOC102017532 uncharacterized LOC102017532 NW_004955405 28134343 28156820 + 102017532 AGCD01005231;AGCD01005232;GBDF01124119;XR_259401 MODEL 8960705 protein-coding Icam2 intercellular adhesion molecule 2 ENCODES a protein that exhibits integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); dendritic cell migration (ortholog); leukocyte cell-cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell periphery (ortholog); cleavage furrow (ortholog); microvillus (ortholog) NW_004955478 7846460 7851889 + 102017233 AGCD01055998;GBDJ01213998;XM_005402176 XP_005402233 MODEL 8766182 protein-coding Actg1 actin gamma 1 ENCODES a protein that exhibits identical protein binding (ortholog); profilin binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to type II interferon (ortholog); morphogenesis of a polarized epithelium (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Abdominal Pain (ortholog); Abnormal Reflexes (ortholog); Acute Coronary Syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical junction complex (ortholog) NW_004955506 1546678 1549611 + 102005491 AGCD01065271;GBDI01040603;XM_013506066 XP_013361520 MODEL 8933502 protein-coding Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ENCODES a protein that exhibits 3'(2'),5'-bisphosphate nucleotidase activity (ortholog); 3',5'-nucleotide bisphosphate phosphatase activity (ortholog); 3'-nucleotidase activity (ortholog); INVOLVED IN chondrocyte development (ortholog); chondroitin sulfate proteoglycan metabolic process (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chondrodysplasia with joint dislocations gPAPP type (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network membrane (ortholog) NW_004955454 15899820 15918222 - 102007970 AGCD01045497;AGCD01045498;GBDF01119202;GBDK01128450;XM_013520210;XM_013520211 XP_013375664;XP_013375665 MODEL 8724722 ncrna LOC102011392 uncharacterized LOC102011392 NW_004955404 682584 698750 + 102011392 AGCD01003207;XR_259283 MODEL 8756232 protein-coding LOC102012655 PRAME family member 9/15-like NW_004955486 31204 93920 - 102012655 AGCD01058788;AGCD01058789;AGCD01058790;AGCD01058791;AGCD01058792;AGCD01058793;AGCD01058794;AGCD01058795;AGCD01058796;AGCD01058797;AGCD01058798;AGCD01058799;AGCD01058800;GBBH01072713;XM_013504133 XP_013359587 MODEL 8897185 ncrna LOC102010253 uncharacterized LOC102010253 NW_004955415 31218654 31219403 - 102010253 AGCD01016671;GBDF01001956;XR_260330 MODEL 8731910 protein-coding Ephx4 epoxide hydrolase 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955423 2389745 2425036 - 102026760 AGCD01023472;GBDJ01093449;XM_005385060 XP_005385117 MODEL 8859263 protein-coding Lgals9 galectin 9 ENCODES a protein that exhibits carbohydrate binding (ortholog); disaccharide binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); cellular response to virus (ortholog); ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955481 5234125 5249564 - 102011003 AGCD01056965;GBDI01000534;XM_013503499;XM_013503501;XM_013503502;XM_013503503;XM_013503504;XM_013503505;XM_013503506;XM_013503507;XM_013503508 XP_013358953;XP_013358955;XP_013358956;XP_013358957;XP_013358958;XP_013358959;XP_013358960;XP_013358961;XP_013358962 MODEL 8891548 protein-coding Dusp9 dual specificity phosphatase 9 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); thymoma (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955580 388277 392269 + 102013565 AGCD01075602;AGCD01075603;GBCQ01088638;XM_013509676 XP_013365130 MODEL 8818471 protein-coding Atp10b ATPase phospholipid transporting 10B (putative) ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); glycosylceramide flippase activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN lysosomal membrane organization (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); late endosome membrane (ortholog) NW_004955408 14495165 14815648 - 102028828 AGCD01008399;AGCD01008400;AGCD01008401;AGCD01008402;AGCD01008403;AGCD01008404;AGCD01008405;AGCD01008406;AGCD01008407;GBCQ01000712;XM_005376268;XM_005376269;XM_005376270 XP_005376325;XP_005376326;XP_005376327 MODEL 9048631 protein-coding Cd8a CD8 subunit alpha ENCODES a protein that exhibits identical protein binding (ortholog); MHC class I protein complex binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cytotoxic T cell differentiation (ortholog); defense response to virus (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); amphetamine abuse (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955424 952595 979159 + 102014798 AGCD01024225;AGCD01024226;AGCD01024227;GBDJ01073200;XM_005385387;XM_005385388;XM_005385389;XM_005385390 XP_005385444;XP_005385445;XP_005385446;XP_005385447 MODEL 9002255 protein-coding LOC102007981 translation initiation factor IF-2-like NW_004955413 24038776 24042868 - 102007981 AGCD01014345;GBDI01226162;XM_005379216 XP_005379273 MODEL 9021784 protein-coding Anapc10 anaphase promoting complex subunit 10 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Mayer-Rokitansky-Kuster-Hauser syndrome type 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytoplasm (ortholog) NW_004955428 945238 1029818 - 102030448 AGCD01027594;AGCD01027595;AGCD01027596;AGCD01027597;AGCD01027598;GBDJ01028582;XM_005386637;XM_005386638;XM_005386639;XM_013515276 XP_005386694;XP_005386695;XP_005386696;XP_013370730 MODEL 8984861 protein-coding Clec14a C-type lectin domain containing 14A ENCODES a protein that exhibits extracellular matrix protein binding (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); lymphangiogenesis (ortholog); sprouting angiogenesis (ortholog); FOUND IN endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955409 22819530 22823306 + 102017749 AGCD01010046;GBDK01089985;XM_005376891 XP_005376948 MODEL 8704247 pseudo LOC102005408 nucleosome assembly protein 1-like 1 pseudogene NW_004955515 171191 172070 + 102005408 AGCD01067185 MODEL 8916185 protein-coding Itgal integrin subunit alpha L ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cell adhesion receptor activity (ortholog); ICAM-3 receptor activity (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell adhesion mediated by integrin (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Behcet's disease (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); external side of plasma membrane (ortholog) NW_004955493 7397813 7435420 + 102015535 AGCD01061187;AGCD01061188;AGCD01061189;AGCD01061190;AGCD01061191;AGCD01061192;AGCD01061193;GBBH01163916;GBDK01136382;XM_013504854 XP_013360308 MODEL 8973894 protein-coding LOC102009095 carboxylesterase 1D-like NW_004955433 13464493 13497375 - 102009095 AGCD01031692;GBCQ01008179;XM_005388331;XM_005388332 XP_005388388;XP_005388389 MODEL 8960601 pseudo LOC102011014 60S ribosomal protein L32 pseudogene NW_004955422 28865640 28866566 + 102011014 AGCD01023372 MODEL 9055329 ncrna LOC102021610 uncharacterized LOC102021610 NW_004955447 10979457 11045604 - 102021610 AGCD01040895;AGCD01040896;AGCD01040897;AGCD01040898;AGCD01040899;GBCB01088708;XR_262419 MODEL 9043073 pseudo LOC102008345 phosducin-like protein 3 pseudogene NW_004955434 11550951 11551673 + 102008345 AGCD01032380 MODEL 8897190 protein-coding Gatad2a GATA zinc finger domain containing 2A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN anterior neuropore closure (ortholog); blood vessel development (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Genetic Predisposition to Disease (ortholog); FOUND IN chromosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955524 2439594 2506539 - 102012356 AGCD01068818;GBCE01076477;XM_005409631;XM_005409632;XM_005409634;XM_005409636;XM_013507292;XM_013507293;XM_013507294;XM_013507295 XP_005409688;XP_005409689;XP_005409691;XP_005409693;XP_013362746;XP_013362747;XP_013362748;XP_013362749 MODEL 39134122 misc_rna 7SK 7SK RNA 9032840 protein-coding LOC102004375 olfactory receptor 51Q1-like NW_004955414 21317366 21326113 + 102004375 AGCD01015412;AGCD01015413;AGCD01015414;XM_005380083 XP_005380140 MODEL 8919558 protein-coding Abcf2 ATP binding cassette subfamily F member 2 ASSOCIATED WITH Disease Progression (ortholog); FOUND IN cytosol (ortholog) NW_004955491 5630543 5642246 - 102007562 AGCD01060493;GBDF01000389;XM_005404829;XM_013504622;XM_013504623;XM_013504624 XP_005404886;XP_013360076;XP_013360077;XP_013360078 MODEL 8918535 protein-coding Cdrt4 CMT1A duplicated region transcript 4 NW_004955467 2228017 2267693 + 102020100 AGCD01051306;GBDF01002361;XM_013522028;XM_013522029;XR_001236836;XR_001236837 XP_013377482;XP_013377483 MODEL 39133990 misc_rna 7SK 7SK RNA 9051992 pseudo LOC102009463 cordon-bleu protein-like 1 NW_004955407 25359436 25360666 + 102009463 AGCD01007501 MODEL 8842640 protein-coding Chrna7 cholinergic receptor nicotinic alpha 7 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); activation of protein kinase C activity (ortholog); associative learning (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); Auditory Perceptual Disorders (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); apical plasma membrane (ortholog); asymmetric synapse (ortholog) NW_004955416 30687518 30798700 + 102021007 AGCD01017700;AGCD01017701;AGCD01017702;GBCE01011635;XM_013512688 XP_013368142 MODEL 8976858 protein-coding Adgrl4 adhesion G protein-coupled receptor L4 INVOLVED IN protein-containing complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955423 14395712 14487803 + 102009961 AGCD01023761;GBDK01413276;XM_005385180 XP_005385237 MODEL 39134123 misc_rna 7SK 7SK RNA 9045847 protein-coding Des desmin ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN intermediate filament organization (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 9 (ortholog); FOUND IN cardiac myofibril (ortholog); cell tip (ortholog); cell-cell junction (ortholog) NW_004955453 14039502 14046572 - 102006976 AGCD01044857;GBDK01160362;XM_005395527 XP_005395584 MODEL 39131475 protein-coding C3orf85 chromosome 3 open reading frame 85 8969573 protein-coding Ccdc125 coiled-coil domain containing 125 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); negative regulation of cell motility (ortholog); negative regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955575 15727 50076 - 102019217 AGCD01075194;AGCD01075195;AGCD01075196;AGCD01075197;GBDJ01273825;XM_005413896;XM_005413902;XM_005413903;XM_013509587;XM_013509588;XM_013509589;XM_013509590;XM_013509591;XM_013509594;XM_013509595;XM_013509596;XM_013509597 XP_005413953;XP_005413959;XP_005413960;XP_013365041;XP_013365042;XP_013365043;XP_013365044;XP_013365045;XP_013365048;XP_013365049;XP_013365050;XP_013365051 MODEL 8768257 protein-coding Ccm2l CCM2 like scaffold protein INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac muscle tissue growth (ortholog); negative regulation of homotypic cell-cell adhesion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955422 28989242 29005827 - 102005724 AGCD01023376;AGCD01023377;GBBH01106937;GBCE01049493;XM_013514318 XP_013369772 MODEL 8925355 pseudo LOC102005409 CTD small phosphatase-like protein 2 pseudogene NW_004955520 665791 667200 - 102005409 AGCD01068028 MODEL 8909067 protein-coding Cd8b CD8 subunit beta INVOLVED IN T cell activation (ortholog); T cell receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955424 922916 939469 + 102014463 AGCD01024223;GBDK01430415;XM_005385386 XP_005385443 MODEL 8866602 protein-coding Cnpy1 canopy FGF signaling regulator 1 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian cancer (ortholog) NW_004955491 8451254 8457584 - 102017884 AGCD01060616;GBDF01023722;XM_005404863 XP_005404920 MODEL 39133864 misc_rna 7SK 7SK RNA 8748300 protein-coding Il12rb2 interleukin 12 receptor subunit beta 2 ENCODES a protein that exhibits coreceptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN interleukin-12-mediated signaling pathway (ortholog); peptidyl-tyrosine phosphorylation (ortholog); positive regulation of natural killer cell proliferation (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN external side of plasma membrane (ortholog); interleukin-12 receptor complex (ortholog) NW_004955423 23774557 23806744 - 102015967 AGCD01024017;AGCD01024018;GBBH01120818;GBDF01250178;XM_013514509 XP_013369963 MODEL 39131984 rrna 5S_rRNA 5S ribosomal RNA 10295339 protein-coding Icam4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN cell-cell adhesion mediated by integrin (ortholog); heterotypic cell-cell adhesion (ortholog); leukocyte cell-cell adhesion (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955495 1573444 1575595 + 106146785 AGCD01061703;GBDJ01131667;XM_013505169 XP_013360623 MODEL 8932072 protein-coding Gpr31 G protein-coupled receptor 31 ENCODES a protein that exhibits arachidonate binding (ortholog); bioactive lipid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of inflammatory response (ortholog); positive regulation of immune response (ortholog); FOUND IN plasma membrane (ortholog) NW_004955439 14906304 14907574 + 102022965 AGCD01035993;XM_005390642 XP_005390699 MODEL 10238139 protein-coding LOC106149898 uncharacterized LOC106149898 NW_004955456 13865208 13938399 - 106149898 AGCD01046626;AGCD01046627;AGCD01046628;AGCD01046629;XM_013520652 XP_013376106 MODEL 39131489 protein-coding AKAIN1 A-kinase anchor inhibitor 1 9067303 ncrna LOC102003670 uncharacterized LOC102003670 NW_004955424 25890232 25893041 - 102003670 AGCD01025056;GBDF01023092;XR_261109 MODEL 8957897 protein-coding Hpn hepsin ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN basement membrane disassembly (ortholog); cholesterol homeostasis (ortholog); cochlea morphogenesis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); intellectual disability (ortholog); lipid storage disease (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cell-cell junction (ortholog) NW_004955468 4384630 4399881 + 102010244 AGCD01051908;GBDI01070849;XM_005400020 XP_005400077 MODEL 8812046 protein-coding Capn1 calpain 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); mammary gland involution (ortholog); negative regulation of actin filament polymerization (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); aortic atherosclerosis (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 20006448 20026984 - 102014143 AGCD01023057;GBDJ01022899;XM_005384508;XM_005384509 XP_005384565;XP_005384566 MODEL 39134429 misc_rna 7SK 7SK RNA 8736702 pseudo LOC102006494 geranylgeranyl transferase type-2 subunit beta pseudogene NW_004955436 18078850 18082980 - 102006494 AGCD01033955 MODEL 8726904 protein-coding Eloc elongin C ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription corepressor binding (ortholog); INVOLVED IN positive regulation of transcription elongation by RNA polymerase II (ortholog); protein ubiquitination (ortholog); target-directed miRNA degradation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); elongin complex (ortholog) NW_004955444 6400721 6415881 + 102020296 AGCD01038864;AGCD01038865;GBDF01004742;XM_005392079;XM_005392080 XP_005392136;XP_005392137 MODEL 8791405 protein-coding Ap1s3 adaptor related protein complex 1 subunit sigma 3 INVOLVED IN protein targeting (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); psoriasis (ortholog); psoriasis 15 (ortholog) NW_004955453 10183640 10242195 + 102021206 AGCD01044782;AGCD01044783;GBCE01115394;XM_005395487;XM_013519980 XP_005395544;XP_013375434 MODEL 8877078 pseudo LOC102008351 39S ribosomal protein L47, mitochondrial pseudogene NW_004955438 21220270 21221541 - 102008351 AGCD01035530 MODEL 8947664 protein-coding Chrna9 cholinergic receptor nicotinic alpha 9 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH lung small cell carcinoma (ortholog); Neoplastic Cell Transformation (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); plasma membrane (ortholog) NW_004955443 7148604 7157824 - 102018865 AGCD01038273;GBBH01074482;XM_013518117 XP_013373571 MODEL 8923153 protein-coding Efcab9 EF-hand calcium binding domain 9 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sensor activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN CatSper complex (ortholog); cytoplasm (ortholog); sperm principal piece (ortholog) NW_004955408 24987401 24993284 + 102025216 AGCD01008627;GBDF01114797;XM_005376337 XP_005376394 MODEL 8719129 protein-coding LOC102006846 peptidoglycan recognition protein 3 NW_004955592 116878 131316 + 102006846 AGCD01076300;GBCQ01082261;XM_005414605;XM_013509976;XM_013509977 XP_005414662;XP_013365430;XP_013365431 MODEL 8854456 protein-coding Trh thyrotropin releasing hormone ENCODES a protein that exhibits thyrotropin-releasing hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult walking behavior (ortholog); eating behavior (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amnestic disorder (ortholog); Bradycardia (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) NW_004955429 17487275 17489385 - 102010610 AGCD01028858;GBBH01103008;XM_005387079;XM_013515365 XP_005387136;XP_013370819 MODEL 8848088 protein-coding Actg2 actin gamma 2, smooth muscle INVOLVED IN cellular response to acetaldehyde (ortholog); cellular response to interleukin-6 (ortholog); response to ethanol (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcoholic liver cirrhosis (ortholog); autosomal dominant familial visceral neuropathy (ortholog); FOUND IN cell periphery (ortholog) NW_004955424 11779805 11802446 - 102007914 AGCD01024574;GBDJ01017125;XM_005385535 XP_005385592 MODEL 39133991 misc_rna 7SK 7SK RNA 8979000 protein-coding Fbxl18 F-box and leucine rich repeat protein 18 ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955460 10318089 10349135 - 102029715 AGCD01048578;AGCD01048579;GBDI01254817;XM_005397840;XM_005397841;XM_013521127;XM_013521128;XR_263050 XP_005397897;XP_005397898;XP_013376581;XP_013376582 MODEL 8817993 ncrna LOC102011396 uncharacterized LOC102011396 NW_004955405 4622780 4660674 - 102011396 AGCD01004650;GBDF01088044;XR_001235203;XR_001235204 MODEL 8699859 ncrna LOC102017533 uncharacterized LOC102017533 NW_004955452 15825925 15829234 - 102017533 AGCD01044500;GBDF01153842;XR_001236006;XR_001236007 MODEL 8717866 ncrna LOC102012658 uncharacterized LOC102012658 NW_004955421 25068843 25105800 + 102012658 AGCD01022227;AGCD01022228;GBCQ01032486;XR_260828 MODEL 8917790 protein-coding Bptf bromodomain PHD finger transcription factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN histone modification pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); Alzheimer's disease (ortholog); FOUND IN ATPase complex (ortholog); cell body (ortholog); chromatin (ortholog) NW_004955478 6990816 7088751 + 102026861 AGCD01055938;AGCD01055939;AGCD01055940;AGCD01055941;GBBH01089810;GBCQ01152099;XM_013503185;XM_013503186;XM_013503187;XM_013503188;XM_013503189;XM_013503190;XM_013503191;XM_013503192;XM_013503193;XM_013503194;XM_013503195 XP_013358639;XP_013358640;XP_013358641;XP_013358642;XP_013358643;XP_013358644;XP_013358645;XP_013358646;XP_013358647;XP_013358648;XP_013358649 MODEL 8923832 pseudo LOC102003992 aldose reductase-related protein 2 pseudogene NW_004955430 5217088 5218084 + 102003992 AGCD01029256 MODEL 8826093 protein-coding Kcna10 potassium voltage-gated channel subfamily A member 10 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); vestibular disease (ortholog) NW_004955435 13983831 13985366 - 102019315 AGCD01033213;XM_005388925 XP_005388982 MODEL 8925185 protein-coding Atp10d ATPase phospholipid transporting 10D (putative) ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); glycosylceramide flippase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); phospholipid-translocating ATPase complex (ortholog) NW_004955443 972967 1072797 - 102027685 AGCD01038127;GBBH01114841;XM_005391891;XM_013518093 XP_005391948;XP_013373547 MODEL 39132221 rrna 5S_rRNA 5S ribosomal RNA 8798948 protein-coding Lgalsl galectin like ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955424 19955858 19962170 - 102028437 AGCD01024840;GBCE01013010;GBDI01217236;XM_013514741 XP_013370195 MODEL 8797631 protein-coding Dut deoxyuridine triphosphatase ENCODES a protein that exhibits dUTP diphosphatase activity (ortholog); identical protein binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN dTMP biosynthetic process (ortholog); dUMP biosynthetic process (ortholog); dUTP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH Bone Marrow Failure and Diabetes Mellitus Syndrome (ortholog); Brain Neoplasms (ortholog); High Myopia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955409 5574810 5584135 - 102012506 AGCD01009319;AGCD01009320;GBDF01000559;XM_005376703;XM_005376704;XM_013510306 XP_005376760;XP_005376761;XP_013365760 MODEL 8844765 protein-coding LOC102007982 cytochrome P450 2D17-like NW_004955413 27521610 27655636 - 102007982 AGCD01014511;AGCD01014512;AGCD01014513;AGCD01014514;AGCD01014515;AGCD01014516;AGCD01014517;AGCD01014518;AGCD01014519;AGCD01014520;AGCD01014521;AGCD01014522;AGCD01014523;AGCD01014524;AGCD01014525;AGCD01014526;AGCD01014527;AGCD01014528;AGCD01014529;GBDI01255784;XM_013511457;XM_013511458;XM_013511459;XR_001232980 XP_013366911;XP_013366912;XP_013366913 MODEL 8710848 protein-coding C4bpa complement component 4 binding protein alpha INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal vesicle (ortholog); cell body (ortholog) NW_004955406 42613659 42641918 + 102028495 AGCD01006712;AGCD01006713;GBDI01193239;XM_005375423;XM_013502872;XM_013502874 XP_005375480;XP_013358326;XP_013358328 MODEL 8956397 protein-coding Itgam integrin subunit alpha M ENCODES a protein that exhibits cargo receptor activity (ortholog); cell adhesion receptor activity (ortholog); complement component C3b binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); amyloid-beta clearance (ortholog); cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955493 8116886 8160806 + 102005053 AGCD01061266;AGCD01061267;AGCD01061268;AGCD01061269;AGCD01061270;AGCD01061271;AGCD01061272;GBCE01084594;XM_005405314;XM_005405316;XM_013504857;XM_013504858 XP_005405371;XP_005405373;XP_013360311;XP_013360312 MODEL 9014275 protein-coding Cnpy2 canopy FGF signaling regulator 2 INVOLVED IN negative regulation of gene expression (ortholog); regulation of low-density lipoprotein particle clearance (ortholog); ASSOCIATED WITH Craniosynostosis Syndrome, Autosomal Recessive (ortholog); Disease Progression (ortholog); lung cancer (ortholog) NW_004955458 3921208 3924785 - 102007633 AGCD01047354;GBDF01083333;XM_005397307;XM_005397308 XP_005397364;XP_005397365 MODEL 9052505 protein-coding Clec16a C-type lectin domain containing 16A INVOLVED IN cellular response to starvation (ortholog); mitophagy (ortholog); negative regulation of autophagosome maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Addison's disease (ortholog); allergic rhinitis (ortholog); FOUND IN cytosol (ortholog); endolysosome membrane (ortholog); endosome membrane (ortholog) NW_004955442 7369616 7584052 - 102003698 AGCD01037624;AGCD01037625;GBBH01207669;XM_005391170;XM_005391173;XM_013517851;XM_013517852;XM_013517853;XM_013517854;XM_013517855;XM_013517856 XP_005391227;XP_005391230;XP_013373305;XP_013373306;XP_013373307;XP_013373308;XP_013373309;XP_013373310 MODEL 8764159 protein-coding LOC102004376 olfactory receptor 2D3-like NW_004955414 22643659 22649023 - 102004376 AGCD01015468;XM_013511769;XM_013511770 XP_013367223;XP_013367224 MODEL 39131985 rrna 5S_rRNA 5S ribosomal RNA 39134124 misc_rna 7SK 7SK RNA 8752687 protein-coding Abcf3 ATP binding cassette subfamily F member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog) NW_004955420 23271925 23280988 - 102026431 AGCD01021240;GBCQ01005116;XM_005383346 XP_005383403 MODEL 8857945 protein-coding Anapc13 anaphase promoting complex subunit 13 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955501 4096026 4103212 + 102021369 AGCD01064111;GBDF01088790;XM_005406787 XP_005406844 MODEL 8981983 ncrna LOC102021611 uncharacterized LOC102021611 NW_004955577 873676 895172 - 102021611 AGCD01075417;GBDF01145731;XR_265081 MODEL 8752645 protein-coding Cfap276 cilia and flagella associated protein 276 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease intermediate type (ortholog); malaria (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) NW_004955435 12522502 12530699 - 102024043 AGCD01033149;GBBH01007083;XM_005388846 XP_005388903 MODEL 8889200 protein-coding Desi1 desumoylating isopeptidase 1 ENCODES a protein that exhibits deSUMOylase activity (ortholog); identical protein binding (ortholog); importin-alpha family protein binding (ortholog); INVOLVED IN protein desumoylation (ortholog); protein export from nucleus (ortholog); regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955413 27115130 27135625 - 102021117 AGCD01014495;GBDK01134746;XM_005379358;XM_005379359 XP_005379415;XP_005379416 MODEL 8753410 pseudo LOC102009099 UDP-glucuronosyltransferase 1-1 pseudogene NW_004955433 9487229 9488826 + 102009099 AGCD01031613 MODEL 9053374 ncrna LOC102005410 uncharacterized LOC102005410 NW_004955435 5085524 5096408 - 102005410 AGCD01032876;GBDF01087889;XR_001234879 MODEL 9057518 protein-coding Adgrv1 adhesion G protein-coupled receptor V1 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955418 20603323 21039891 - 102025794 AGCD01019240;AGCD01019241;AGCD01019242;AGCD01019243;AGCD01019244;AGCD01019245;AGCD01019246;AGCD01019247;AGCD01019248;AGCD01019249;AGCD01019250;AGCD01019251;AGCD01081641;GBBH01228156;GBCQ01099833;XM_013512957 XP_013368411 MODEL 8747464 protein-coding Epm2a EPM2A glucan phosphatase, laforin ENCODES a protein that exhibits carbohydrate binding (ortholog); carbohydrate phosphatase activity (ortholog); glycogen binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH cataract (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) NW_004955436 14925452 14982357 + 102005839 AGCD01033880;AGCD01033881;AGCD01033882;GBBH01222266;XM_005389308 XP_005389365 MODEL 39133865 misc_rna 7SK 7SK RNA 8888759 protein-coding LOC102010255 deleted in malignant brain tumors 1 protein NW_004955477 966067 1052359 + 102010255 AGCD01055497;AGCD01055498;AGCD01055499;AGCD01055500;AGCD01055501;AGCD01055502;GBDF01198016;XM_013503021 XP_013358475 MODEL 8838142 protein-coding Cd9 CD9 molecule ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955413 3891874 3924065 + 102011638 AGCD01013589;GBBH01004017;XM_005378756 XP_005378813 MODEL 9034545 protein-coding LOC102011016 guanylate-binding protein 4 NW_004955423 4931941 4946708 + 102011016 AGCD01023550;GBBH01026001;GBCQ01139851;XM_013514413 XP_013369867 MODEL 9021627 protein-coding Icam5 intercellular adhesion molecule 5 ENCODES a protein that exhibits integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell-cell adhesion mediated by integrin (ortholog); homophilic cell-cell adhesion (ortholog); neuron cell-cell adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN dendritic spine membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955495 1575669 1583904 + 102027202 AGCD01061703;GBBH01154350;XM_013505160 XP_013360614 MODEL 9029793 pseudo LOC102006849 RNA-binding protein FUS-like NW_004955402 44011709 44055168 + 102006849 AGCD01001085;AGCD01001086 MODEL 8996562 protein-coding Gpr32 G protein-coupled receptor 32 ASSOCIATED WITH autism spectrum disorder (ortholog) NW_004955559 500852 501880 - 102016206 AGCD01073590;XM_005412970 XP_005413027 MODEL 8827848 protein-coding LOC102003671 zinc finger protein 431-like NW_004955499 450865 478358 - 102003671 AGCD01063232;GBDI01258841;XM_005406501;XM_013505568;XM_013505569 XP_005406558;XP_013361022;XP_013361023 MODEL 8937024 protein-coding Ccdc126 coiled-coil domain containing 126 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955410 25827309 25857028 + 102015614 AGCD01011177;AGCD01011178;AGCD01011179;GBDF01043959;XM_005377402;XM_005377404;XM_005377405;XM_013510697;XM_013510698;XR_001232773 XP_005377459;XP_005377461;XP_005377462;XP_013366151;XP_013366152 MODEL 8755766 protein-coding Hprt1 hypoxanthine phosphoribosyltransferase 1 ENCODES a protein that exhibits guanine phosphoribosyltransferase activity (ortholog); hypoxanthine phosphoribosyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenine metabolic process (ortholog); AMP salvage (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955473 462940 510006 - 102021964 AGCD01053838;AGCD01053839;AGCD01053840;AGCD01053841;AGCD01053842;GBDJ01128098;XM_005401290 XP_005401347 MODEL 8809986 protein-coding Capn10 calpain 10 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cellular response to insulin stimulus (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955542 874083 885085 - 102015768 AGCD01071481;GBDF01159703;XM_005411155;XM_013508102 XP_005411212;XP_013363556 MODEL 39132223 rrna 5S_rRNA 5S ribosomal RNA 8721023 protein-coding LOC102009464 chromosome unknown open reading frame, human C5orf15 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955408 5245336 5256655 - 102009464 AGCD01008129;GBCQ01005179;XM_005376124;XM_005376125 XP_005376181;XP_005376182 MODEL 39134430 misc_rna 7SK 7SK RNA 9009932 protein-coding Gatad2b GATA zinc finger domain containing 2B INVOLVED IN chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Anisocoria (ortholog); atrial heart septal defect (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); nuclear speck (ortholog) NW_004955545 424997 519031 - 102021177 AGCD01071793;AGCD01071794;AGCD01071795;AGCD01071796;AGCD01071797;AGCD01071798;GBDI01293510;XM_005411445;XM_005411446;XM_005411447;XM_005411448;XM_013508226;XM_013508227 XP_005411502;XP_005411503;XP_005411504;XP_005411505;XP_013363680;XP_013363681 MODEL 8715454 protein-coding Akap1 A-kinase anchoring protein 1 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); apoptotic process (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955451 5756648 5787617 - 102010655 AGCD01043175;AGCD01043176;GBCE01114894;XM_005394060;XM_013519400;XM_013519401;XM_013519402 XP_005394117;XP_013374854;XP_013374855;XP_013374856 MODEL 9033538 protein-coding Ap2a1 adaptor related protein complex 2 subunit alpha 1 ENCODES a protein that exhibits clathrin-cargo adaptor activity (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of hyaluronan biosynthetic process (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955559 1117380 1143403 - 102030354 AGCD01073630;GBDF01003430;XM_005412825;XM_005412826;XM_013509046;XM_013509047 XP_005412882;XP_005412883;XP_013364500;XP_013364501 MODEL 8867124 protein-coding LOC102007986 tripartite motif-containing protein 5-like NW_004955414 21541749 21555056 - 102007986 AGCD01015423;GBCQ01013376;XM_005380093;XM_013512002;XM_013512004 XP_005380150;XP_013367456;XP_013367458 MODEL 8895145 protein-coding Il13 interleukin 13 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-13 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenoid hypertrophy (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955408 4046406 4049795 + 102030278 AGCD01008086;GBBH01173848;XM_005376104;XM_013508342 XP_005376161;XP_013363796 MODEL 8889311 protein-coding Ccn1 cellular communication network factor 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process involved in heart morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrioventricular valve morphogenesis (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Heart Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955423 8416498 8419029 - 102024022 AGCD01023629;GBBH01030882;XM_005385136 XP_005385193 MODEL 8893417 protein-coding Cd93 CD93 molecule ENCODES a protein that exhibits complement component C1q complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); thyroid gland carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955415 30244231 30255184 - 102029615 AGCD01016660;GBCQ01091933;XM_005380960;XR_260326 XP_005381017 MODEL 9062900 pseudo LOC102008354 pre-mRNA-processing factor 17-like NW_004955441 193642 199372 - 102008354 AGCD01036688 MODEL 8857018 protein-coding Clec17a C-type lectin domain containing 17A ENCODES a protein that exhibits D-mannose binding (ortholog); fucose binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog) NW_004955415 31715870 31738131 - 102017008 AGCD01016692;AGCD01016693;AGCD01016694;GBBH01155598;XM_013512236;XM_013512237 XP_013367690;XP_013367691 MODEL 39133992 misc_rna 7SK 7SK RNA 8772274 pseudo LOC102011398 ubiquitin-conjugating enzyme E2 D2 pseudogene NW_004955406 14133361 14133789 - 102011398 AGCD01005958 MODEL 8760565 ncrna LOC102012659 uncharacterized LOC102012659 NW_004955422 126981 128331 + 102012659 AGCD01022394;GBDF01161749;XR_260841 MODEL 8958177 protein-coding LOC102017540 carbonyl reductase [NADPH] 1-like NW_004955407 35259036 35262870 + 102017540 AGCD01007734;AGCD01007735;GBCQ01007849;XM_005375980 XP_005376037 MODEL 8800749 protein-coding Braf B-Raf proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); MAP kinase kinase activity (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; colorectal cancer pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); amblyopia (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955494 2567238 2712708 + 102018105 AGCD01061441;AGCD01061442;AGCD01061443;AGCD01061444;AGCD01061445;AGCD01061446;AGCD01061447;AGCD01061448;GBDF01011297;GBDF01011303;XM_005405413;XM_005405415;XM_005405418;XM_005405419;XM_013504993;XM_013504994;XM_013504995;XM_013504996;XM_013504997;XR_001231320;XR_001231321 XP_005405470;XP_005405472;XP_005405475;XP_005405476;XP_013360447;XP_013360448;XP_013360449;XP_013360450;XP_013360451 MODEL 8709568 protein-coding C4bpb complement component 4 binding protein beta INVOLVED IN negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); regulation of opsonization (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 42601164 42608912 + 102024876 AGCD01006712;GBDF01118429;XM_005375411 XP_005375468 MODEL 8850450 protein-coding Cds1 CDP-diacylglycerol synthase 1 ENCODES a protein that exhibits phosphatidate cytidylyltransferase activity (ortholog); INVOLVED IN CDP-diacylglycerol biosynthetic process (ortholog); lipid droplet formation (ortholog); phosphatidylinositol biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955474 5057833 5104235 - 102030523 AGCD01054393;GBBH01126960;XM_013502782 XP_013358236 MODEL 8926236 protein-coding Chrnb1 cholinergic receptor nicotinic beta 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); monoatomic cation transport (ortholog); muscle cell development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH apraxia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) NW_004955467 9471962 9482370 - 102013271 AGCD01051513;GBCB01005969;XM_005399490;XM_005399491;XM_005399492;XM_005399493;XM_005399494;XM_013522232;XM_013522233 XP_005399547;XP_005399548;XP_005399549;XP_005399550;XP_005399551;XP_013377686;XP_013377687 MODEL 8963342 protein-coding Atp11a ATPase phospholipid transporting 11A ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylethanolamine flippase activity (ortholog); phosphatidylserine flippase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); positive regulation of myotube differentiation (ortholog); regulation of membrane lipid distribution (ortholog); ASSOCIATED WITH Autosomal Dominant Auditory Neuropathy 2 (ortholog); autosomal dominant nonsyndromic deafness 33 (ortholog); autosomal dominant nonsyndromic deafness 84 (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955404 820788 906531 - 102011941 AGCD01003212;AGCD01003213;AGCD01003214;GBCE01029356;XM_013515626;XM_013515632;XM_013515639;XM_013515641;XM_013515652;XM_013515654;XM_013515661;XM_013515663;XM_013515667;XR_001234554;XR_001234555 XP_013371080;XP_013371086;XP_013371093;XP_013371095;XP_013371106;XP_013371108;XP_013371115;XP_013371117;XP_013371121 MODEL 8776090 protein-coding Lgi1 leucine rich glioma inactivated 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); neuron projection development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon initial segment (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955507 268032 304949 + 102003163 AGCD01065465;AGCD01065466;GBBH01057240;XM_005407523;XM_005407524;XM_013506244 XP_005407580;XP_005407581;XP_013361698 MODEL 8996389 ncrna LOC102009100 uncharacterized LOC102009100 NW_004955523 130276 134656 - 102009100 AGCD01068435;XR_001231912 MODEL 8735671 protein-coding Trhde thyrotropin releasing hormone degrading enzyme ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); long QT syndrome (ortholog) NW_004955405 12229448 12624753 + 102006536 AGCD01004850;AGCD01004851;AGCD01004852;AGCD01004853;AGCD01004854;AGCD01004855;AGCD01004856;AGCD01004857;AGCD01004858;AGCD01004859;GBDI01314318;XM_005374325 XP_005374382 MODEL 8806657 protein-coding Itgav integrin subunit alpha V ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); collagen binding (ortholog); coreceptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); apolipoprotein A-I-mediated signaling pathway (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN integrin mediated signaling pathway; platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN alphav-beta3 integrin-HMGB1 complex (ortholog); alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog); cell surface (ortholog) NW_004955403 11588536 11669809 - 102013676 AGCD01001957;GBCE01053605;XM_005373337;XM_013512419;XM_013512423;XM_013512426 XP_005373394;XP_013367873;XP_013367877;XP_013367880 MODEL 8811114 pseudo LOC102006499 60S ribosomal protein L21 pseudogene NW_004955547 321133 321616 - 102006499 AGCD01072145;XR_264897 MODEL 8813216 protein-coding Cnpy3 canopy FGF signaling regulator 3 ENCODES a protein that exhibits signaling receptor binding (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 60 (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955437 8930883 8939869 + 102026673 AGCD01034507;AGCD01034508;GBDI01005033;XM_005389733;XM_005389734 XP_005389790;XP_005389791 MODEL 9057686 pseudo LOC102004377 40S ribosomal protein S2-like NW_004955470 11454325 11473606 - 102004377 AGCD01052889 MODEL 8782075 pseudo LOC102011017 60S ribosomal protein L7 pseudogene NW_004955423 15037609 15043726 + 102011017 AGCD01023788;AGCD01023789 MODEL 39131986 rrna 5S_rRNA 5S ribosomal RNA 9047853 protein-coding Fbxl19 F-box and leucine rich repeat protein 19 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); unmethylated CpG binding (ortholog); zinc ion binding (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955493 7768802 7798546 + 102023924 AGCD01061225;AGCD01061226;AGCD01061227;GBDF01189934;XM_005405282;XM_005405283;XM_013504751;XM_013504752;XM_013504753;XM_013504754;XM_013504755;XM_013504756 XP_005405339;XP_005405340;XP_013360205;XP_013360206;XP_013360207;XP_013360208;XP_013360209;XP_013360210 MODEL 8774829 protein-coding Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); ethanol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); behavioral response to ethanol (ortholog); ethanol catabolic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Binge Drinking (ortholog); FOUND IN cytosol (ortholog) NW_004955496 8136279 8149496 + 102026021 AGCD01062390;GBCQ01011154;XM_005406277 XP_005406334 MODEL 9008672 protein-coding Desi2 desumoylating isopeptidase 2 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955406 7881815 7894690 + 102007966 AGCD01005779;GBBH01150375;GBCC01014190;XM_013520388 XP_013375842 MODEL 8723177 pseudo LOC102003996 40S ribosomal protein S20 pseudogene NW_004955513 5462592 5467878 + 102003996 AGCD01066971 MODEL 39133866 misc_rna 7SK 7SK RNA 8736958 protein-coding Ice1 interactor of little elongation complex ELL subunit 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of intracellular protein transport (ortholog); positive regulation of protein-containing complex assembly (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) NW_004955504 3409431 3465245 + 102023173 AGCD01064868;AGCD01064869;GBBH01050745;GBCE01064782;XM_013505895 XP_013361349 MODEL 8807231 protein-coding Epm2aip1 EPM2A interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of glycogen (starch) synthase activity (ortholog); positive regulation of glycogen biosynthetic process (ortholog); response to insulin (ortholog); ASSOCIATED WITH hereditary nonpolyposis colorectal cancer type 2 (ortholog); Lynch syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); nucleus (ortholog) NW_004955421 3882486 3889851 - 102005049 AGCD01021672;GBDI01180311;XM_005383692 XP_005383749 MODEL 8714239 protein-coding Kcna2 potassium voltage-gated channel subfamily A member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); kinesin binding (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); corpus callosum development (ortholog); neuronal action potential (ortholog); ASSOCIATED WITH brain disease (ortholog); Cognitive Dysfunction (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) NW_004955435 14074346 14080026 - 102019634 AGCD01033215;AGCD01033216;GBDI01208819;XM_005388926;XM_005388927;XM_005388929;XM_005388930;XM_013516559 XP_005388983;XP_005388984;XP_005388986;XP_005388987;XP_013372013 MODEL 9014637 protein-coding Efcc1 EF-hand and coiled-coil domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955450 10494407 10523125 - 102009000 AGCD01042622;AGCD01042623;AGCD01042624;GBBH01206079;GBCE01123547;XM_013518907 XP_013374361 MODEL 9032728 protein-coding Elof1 elongation factor 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN transcription-coupled nucleotide-excision repair (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955495 2403566 2406182 - 102026651 AGCD01061770;GBDF01005723;XM_005405674;XM_013505116;XM_013505117 XP_005405731;XP_013360570;XP_013360571 MODEL 39134125 misc_rna 7SK 7SK RNA 10203566 ncrna LOC106149899 uncharacterized LOC106149899 NW_004955456 16166475 16176491 + 106149899 AGCD01046692;AGCD01046693;XR_001236365 MODEL 8708855 protein-coding Actl10 actin like 10 NW_004955422 27650166 27651452 - 102026990 AGCD01023331;GBDF01090365;XM_005384923 XP_005384980 MODEL 8857160 ncrna LOC102021615 uncharacterized LOC102021615 NW_004955403 17548756 17613098 - 102021615 AGCD01002079;AGCD01002080;GBDF01001507;XR_259181 MODEL 8957328 protein-coding Abcg1 ATP binding cassette subfamily G member 1 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cellular response to high density lipoprotein particle stimulus (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955407 39410262 39459383 - 102015605 AGCD01007825;AGCD01007826;GBCQ01150155;XM_005375832;XM_005375833 XP_005375889;XP_005375890 MODEL 8981293 protein-coding Anapc15 anaphase promoting complex subunit 15 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955414 19218727 19222138 + 102027513 AGCD01015308;GBCB01023059;XM_005379996;XM_005379998;XM_005380000;XM_005380003;XM_005380004;XM_005380005;XM_013511824 XP_005380053;XP_005380055;XP_005380057;XP_005380060;XP_005380061;XP_005380062;XP_013367278 MODEL 8754244 protein-coding Cfap298 cilia and flagella associated protein 298 INVOLVED IN cilium assembly (ortholog); regulation of cilium movement (ortholog); ASSOCIATED WITH primary ciliary dyskinesia 26 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955407 32076670 32089307 - 102016780 AGCD01007669;GBDF01010732;XM_005375670;XM_013504205 XP_005375727;XP_013359659 MODEL 8962480 pseudo LOC102003672 60S ribosomal protein L17 pseudogene NW_004955424 27996316 28003860 - 102003672 AGCD01025143;AGCD01025144;XM_005385817 MODEL 8813589 protein-coding Chrnb2 cholinergic receptor nicotinic beta 2 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); associative learning (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dopaminergic synapse (ortholog) NW_004955545 1065457 1077056 + 102014086 AGCD01071836;GBDF01025054;XM_005411526 XP_005411583 MODEL 39132225 rrna 5S_rRNA 5S ribosomal RNA 10350235 protein-coding Duxb double homeobox B NW_004955510 120981 140525 + 106146973 AGCD01066138;AGCD01066139;GBDF01221746;XM_013506306 XP_013361760 MODEL 9003451 protein-coding Atp11b ATPase phospholipid transporting 11B (putative) ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylserine floppase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955420 11588739 11681636 + 102024912 AGCD01020824;AGCD01020825;AGCD01020826;AGCD01020827;GBDF01046603;GBDF01046604;XM_013513429;XM_013513430;XM_013513431;XM_013513432;XM_013513433;XM_013513434;XM_013513435;XM_013513436 XP_013368883;XP_013368884;XP_013368885;XP_013368886;XP_013368887;XP_013368888;XP_013368889;XP_013368890 MODEL 39134431 misc_rna 7SK 7SK RNA 8955221 pseudo LOC102009469 non-POU domain-containing octamer-binding protein pseudogene NW_004955458 11867254 11868199 - 102009469 AGCD01047762 MODEL 8862066 ncrna LOC102005411 uncharacterized LOC102005411 NW_004955435 20027434 20045778 - 102005411 AGCD01033445;GBDF01117536;XR_261728 MODEL 8878597 pseudo LOC102009101 DNA-directed RNA polymerases I, II, and III subunit RPABC1 pseudogene NW_004955434 8689984 8692539 - 102009101 AGCD01032262 MODEL 9013310 ncrna LOC102010258 uncharacterized LOC102010258 NW_004955416 28137227 28141716 + 102010258 AGCD01017625;GBDF01281711;XR_260429 MODEL 8854453 pseudo LOC102007993 28S ribosomal protein S36, mitochondrial pseudogene NW_004955474 11143140 11143451 - 102007993 AGCD01054611;XM_005401469 MODEL 8816520 protein-coding Akap10 A-kinase anchoring protein 10 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955467 919207 990753 - 102008609 AGCD01051242;AGCD01051243;AGCD01051244;GBDI01297241;XM_005399292;XM_013522190 XP_005399349;XP_013377644 MODEL 8799786 ncrna LOC102006507 uncharacterized LOC102006507 NW_004955445 17401781 17432794 - 102006507 AGCD01039886;AGCD01039887;AGCD01039888;GBDF01208938;XR_262343;XR_262344 MODEL 8934879 protein-coding Itgax integrin subunit alpha X ENCODES a protein that exhibits cell adhesion receptor activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cell-cell adhesion mediated by integrin (ortholog); defense response to virus (ortholog); heterotypic cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); integrin alphaX-beta2 complex (ortholog) NW_004955493 8196593 8220296 + 102021138 AGCD01061280;AGCD01061281;AGCD01061282;GBCE01009606;GBCE01009608;XM_013504859 XP_013360313 MODEL 9019253 protein-coding Ccn2 cellular communication network factor 2 ENCODES a protein that exhibits fibronectin binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN angiogenesis (ortholog); calcium ion transmembrane import into cytosol (ortholog); cartilage condensation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Aggressive Fibromatosis (ortholog); aortic valve insufficiency (ortholog); FOUND IN cell cortex (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955436 12523602 12526986 - 102003277 AGCD01033842;AGCD01033843;GBCE01002481;GBDJ01011208;XM_013516697 XP_013372151 MODEL 8814861 pseudo LOC102004378 transaldolase pseudogene NW_004955414 21830353 21833227 + 102004378 AGCD01015433 MODEL 9016192 protein-coding Cd96 CD96 molecule INVOLVED IN cell-matrix adhesion (ortholog); negative regulation of natural killer cell cytokine production (ortholog); negative regulation of type II interferon production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); C syndrome (ortholog); lymphoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955427 11971051 12057185 + 102019717 AGCD01027198;AGCD01027199;AGCD01027200;AGCD01027201;GBDI01278939;XM_005386365;XM_005386367;XM_013515037;XR_261254 XP_005386422;XP_005386424;XP_013370491 MODEL 39133993 misc_rna 7SK 7SK RNA 8800952 protein-coding Gatb glutamyl-tRNA amidotransferase subunit B ENCODES a protein that exhibits glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) NW_004955471 6230027 6313655 - 102024896 AGCD01053122;AGCD01053123;GBCB01056706;XM_005400896 XP_005400953 MODEL 8795989 protein-coding Clec19a C-type lectin domain containing 19A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 2807410 2839617 - 102003288 AGCD01037481;AGCD01037482;XM_013517644 XP_013373098 MODEL 8920890 ncrna LOC102012660 uncharacterized LOC102012660 NW_004955422 11202376 11214424 - 102012660 AGCD01022751;GBDF01159067;XR_260856;XR_260857 MODEL 8701060 pseudo LOC102011405 chromodomain Y-like protein pseudogene NW_004955407 28152182 28153855 - 102011405 AGCD01007576 MODEL 8743704 protein-coding Capn11 calpain 11 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955437 9791021 9804769 + 102016847 AGCD01034543;GBDF01000703;XM_005389797;XM_005389798;XM_005389799;XM_005389800;XM_005389801;XM_005389802 XP_005389854;XP_005389855;XP_005389856;XP_005389857;XP_005389858;XP_005389859 MODEL 8937492 protein-coding C5ar1 complement C5a receptor 1 ENCODES a protein that exhibits complement component C5a binding (ortholog); complement component C5a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955574 1221942 1229634 + 102008996 AGCD01075168;AGCD01075169;GBDK01317924;XM_005413864 XP_005413921 MODEL 8981400 protein-coding Brap BRCA1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); protein sequestering activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN MAPK cascade (ortholog); negative regulation of signal transduction (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); ubiquitin ligase complex (ortholog) NW_004955482 8254709 8282416 - 102029515 AGCD01057515;GBDF01246857;XM_005403172 XP_005403229 MODEL 9060037 protein-coding Cds2 CDP-diacylglycerol synthase 2 ENCODES a protein that exhibits phosphatidate cytidylyltransferase activity (ortholog); INVOLVED IN CDP-diacylglycerol biosynthetic process (ortholog); lipid droplet formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955415 15762672 15806454 + 102011305 AGCD01016357;AGCD01016358;AGCD01016359;GBBH01034985;GBCE01054212;XM_005380829 XP_005380886 MODEL 8721672 protein-coding Ap2a2 adaptor related protein complex 2 subunit alpha 2 ENCODES a protein that exhibits clathrin-cargo adaptor activity (ortholog); disordered domain specific binding (ortholog); kinase binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN AP-2 adaptor complex (ortholog); cytoplasmic vesicle (ortholog); membrane coat (ortholog) NW_004955476 11184944 11229385 - 102005465 AGCD01055443;AGCD01055444;GBCQ01002043;XM_005401795 XP_005401852 MODEL 8891610 protein-coding LOC102017542 uncharacterized LOC102017542 NW_004955408 29103923 29110123 - 102017542 AGCD01008738;GBDF01128626;XM_013509707;XM_013509711;XR_001232479 XP_013365161;XP_013365165 MODEL 8799876 protein-coding Gpr33 G protein-coupled receptor 33 ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog) NW_004955409 29124200 29130823 + 102010876 AGCD01010253;GBBH01175297;XM_005376955 XP_005377012 MODEL 9013849 ncrna LOC102003674 uncharacterized LOC102003674 NW_004955427 13594699 13599884 + 102003674 AGCD01027253;GBDF01143677;XR_001234373 MODEL 8706439 protein-coding LOC102006850 vomeronasal type-1 receptor 2-like NW_004955603 165496 166395 - 102006850 AGCD01076814;XM_005414836 XP_005414893 MODEL 8975785 protein-coding Lgi2 leucine rich repeat LGI family member 2 INVOLVED IN inhibitory synapse assembly (ortholog); ASSOCIATED WITH epilepsy (ortholog) NW_004955480 58661 89906 + 102025461 AGCD01056578;AGCD01056579;GBBH01193047;GBBH01193048;XM_005402459 XP_005402516 MODEL 8848941 protein-coding Ice2 interactor of little elongation complex ELL subunit 2 INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); snRNA transcription by RNA polymerase II (ortholog); snRNA transcription by RNA polymerase III (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) NW_004955450 14462730 14512708 + 102008485 AGCD01042746;AGCD01042747;AGCD01042748;AGCD01042749;GBCQ01066936;GBDJ01274437;XM_013518923 XP_013374377 MODEL 8759185 protein-coding Il13ra1 interleukin 13 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-13 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-13-mediated signaling pathway (ortholog); positive regulation of B cell proliferation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN interleukin-13 receptor complex (ortholog); interleukin-4 receptor complex (ortholog); plasma membrane (ortholog) NW_004955534 1157758 1205158 - 102016635 AGCD01070487;GBDI01133443;XM_005410457;XM_013507707 XP_005410514;XP_013363161 MODEL 8749432 protein-coding Cnpy4 canopy FGF signaling regulator 4 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); embryonic digit morphogenesis (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955573 747486 752413 - 102027916 AGCD01075004;GBCE01002034;XM_005413742 XP_005413799 MODEL 9065111 ncrna LOC102011020 uncharacterized LOC102011020 NW_004955497 1318649 1323855 + 102011020 AGCD01062456;GBCB01078283;XR_264191 MODEL 39134126 misc_rna 7SK 7SK RNA 8712595 pseudo LOC102008356 kinetochore-associated protein DSN1 homolog pseudogene NW_004955444 350531 351610 - 102008356 AGCD01038664;XM_005392056 MODEL 8888498 protein-coding Elovl1 ELOVL fatty acid elongase 1 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ICHTHYOTIC KERATODERMA, SPASTICITY, HYPOMYELINATION, AND DYSMORPHIC FACIAL FEATURES (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955537 2945509 2950146 - 102026566 AGCD01070940;GBCE01055429;XM_005410653;XM_013507748 XP_005410710;XP_013363202 MODEL 8819669 protein-coding Ccdc127 coiled-coil domain containing 127 INVOLVED IN lipid homeostasis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955504 17499 36804 - 102017141 AGCD01064813;GBCE01077932;XM_005406983 XP_005407040 MODEL 8869764 protein-coding Fbxl2 F-box and leucine rich repeat protein 2 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein phosphatase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); protein monoubiquitination (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955421 512197 617524 + 102018102 AGCD01021564;AGCD01021565;AGCD01021566;AGCD01021567;AGCD01021568;GBDF01143993;XM_005383637;XM_005383638;XM_013513726;XM_013513727 XP_005383694;XP_005383695;XP_013369180;XP_013369181 MODEL 8738277 protein-coding LOC102004387 C-C motif chemokine 8-like NW_004955481 9082226 9083739 + 102004387 AGCD01057094;GBBH01002161;XM_005402840 XP_005402897 MODEL 8759357 protein-coding Cfap299 cilia and flagella associated protein 299 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955433 4581581 5158019 + 102025938 AGCD01031471;AGCD01031472;AGCD01031473;AGCD01031474;AGCD01031475;AGCD01031476;AGCD01031477;AGCD01031478;AGCD01031479;AGCD01031480;AGCD01031481;AGCD01031482;AGCD01031483;AGCD01031484;AGCD01031485;AGCD01031486;AGCD01031487;AGCD01031488;AGCD01031489;AGCD01031490;AGCD01031491;GBDK01431856;XM_005388219;XM_005388220;XM_013516244;XM_013516245;XR_001234746 XP_005388276;XP_005388277;XP_013371698;XP_013371699 MODEL 39132226 rrna 5S_rRNA 5S ribosomal RNA 8710326 ncrna LOC102003998 uncharacterized LOC102003998 NW_004955433 12835847 12849596 + 102003998 AGCD01031671;GBDF01156740;XR_261588 MODEL 8857165 protein-coding Trhr thyrotropin releasing hormone receptor ENCODES a protein that exhibits identical protein binding (ortholog); thyrotropin-releasing hormone receptor activity (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog); positive regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); congenital nongoitrous hypothyroidism 7 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955417 16529293 16565359 + 102021761 AGCD01018264;AGCD01018265;AGCD01018266;XM_005381876 XP_005381933 MODEL 9034501 ncrna LOC102009472 uncharacterized LOC102009472 NW_004955462 1145564 1150883 - 102009472 AGCD01049102;AGCD01049103;GBDF01041427;XR_263087 MODEL 39131987 rrna 5S_rRNA 5S ribosomal RNA 8903505 protein-coding Hps1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN blood coagulation (ortholog); cell morphogenesis (ortholog); eye pigmentation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN BLOC-3 complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955507 4408428 4433219 - 102013740 AGCD01065648;GBCQ01125128;XM_013506202;XM_013506203;XM_013506204;XR_001231634 XP_013361656;XP_013361657;XP_013361658 MODEL 8944773 protein-coding Kcna3 potassium voltage-gated channel subfamily A member 3 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN corpus callosum development (ortholog); optic nerve development (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); developmental and epileptic encephalopathy (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); calyx of Held (ortholog); glutamatergic synapse (ortholog) NW_004955435 14132877 14148911 - 102020836 AGCD01033218;GBDI01085535;GBDI01383956;XM_013516557 XP_013372011 MODEL 39133994 misc_rna 7SK 7SK RNA 8860411 protein-coding Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); aldehyde oxidase activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN ethanol catabolic process (ortholog); ethanol metabolic process (ortholog); fatty acid omega-oxidation (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Laryngeal Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955496 8065943 8100878 + 102025025 AGCD01062388;GBBH01150230;XM_005406273;XM_005406274;XM_013505402;XM_013505404;XM_013505405 XP_005406330;XP_005406331;XP_013360856;XP_013360858;XP_013360859 MODEL 8747515 protein-coding Det1 DET1 partner of COP1 E3 ubiquitin ligase ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955416 16393199 16408144 + 102008098 AGCD01017354;AGCD01017355;GBCB01056645;XM_005381574;XM_005381575;XM_013512684;XM_013512685 XP_005381631;XP_005381632;XP_013368138;XP_013368139 MODEL 9020960 protein-coding LOC102021619 alcohol dehydrogenase class-3 NW_004955405 9311270 9327919 - 102021619 AGCD01004768;AGCD01004769;GBCQ01008804;XM_005374293 XP_005374350 MODEL 39134432 misc_rna 7SK 7SK RNA 39133867 misc_rna 7SK 7SK RNA 8742920 ncrna LOC102010261 uncharacterized LOC102010261 NW_004955482 6580525 6586861 - 102010261 AGCD01057403;XR_263839 MODEL 8935489 protein-coding Abcg2 ATP binding cassette subfamily G member 2 (JR blood group) ENCODES a protein that exhibits ABC-type sulfate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN angiogenesis (ortholog); asymmetric cell division (ortholog); biotin transport (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; erlotinib pharmacodynamics pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955474 12365903 12408715 + 102025237 AGCD01054660;AGCD01054661;GBCC01000779;GBCQ01064509;XM_005401452 XP_005401509 MODEL 8920298 ncrna LOC102008005 uncharacterized LOC102008005 NW_004955494 6144787 6169872 + 102008005 AGCD01061530;GBDF01223353;XR_001231296;XR_264116 MODEL 8928448 protein-coding LOC102005416 complement C4-A NW_004955437 492806 505554 + 102005416 AGCD01034137;AGCD01034138;GBCE01002333;XM_013516778 XP_013372232 MODEL 9060317 protein-coding Akap11 A-kinase anchoring protein 11 ENCODES a protein that exhibits kinase regulator activity (ortholog); protein kinase A catalytic subunit binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); intracellular protein localization (ortholog); positive regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) NW_004955518 4032738 4083720 - 102021381 AGCD01067818;AGCD01067819;AGCD01067820;GBCB01098177;XM_005409104;XM_013506958;XM_013506959;XM_013506960;XM_013506961;XM_013506962 XP_005409161;XP_013362412;XP_013362413;XP_013362414;XP_013362415;XP_013362416 MODEL 39131466 protein-coding CCN3 cellular communication network factor 3 9009403 protein-coding Efemp1 EGF-like fibulin extracellular matrix protein 1 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955424 27181717 27240067 + 102006046 AGCD01025105;GBCE01000010;XM_005385769 XP_005385826 MODEL 8885314 protein-coding Anapc16 anaphase promoting complex subunit 16 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 19367662 19381607 - 102030475 AGCD01034846;AGCD01034847;GBCQ01001144;XM_005390017;XM_005390018 XP_005390074;XP_005390075 MODEL 8824659 protein-coding Gatc glutamyl-tRNA amidotransferase subunit C INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); combined oxidative phosphorylation deficiency 42 (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) NW_004955455 11184400 11195398 - 102011734 AGCD01045986;GBCQ01066619;XM_005396509 XP_005396566 MODEL 8770310 protein-coding Cd99 CD99 molecule (Xg blood group) INVOLVED IN homotypic cell-cell adhesion (ortholog); myeloid dendritic cell activation (ortholog); positive regulation of neutrophil extravasation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog) NW_004955499 1607382 1646172 + 102010384 AGCD01063372;AGCD01063373;AGCD01063374;AGCD01063375;AGCD01063376;AGCD01063377;GBCB01022919;GBCB01022926;XM_013505598 XP_013361052 MODEL 9057027 protein-coding LOC102012661 solute carrier family 23 member 1-like NW_004955494 7357079 7405398 + 102012661 AGCD01061551;AGCD01061552;GBDI01178715;XM_005405484;XM_005405485;XM_005405486;XM_013504941;XM_013504942;XM_013504943;XM_013504944 XP_005405541;XP_005405542;XP_005405543;XP_013360395;XP_013360396;XP_013360397;XP_013360398 MODEL 8938512 protein-coding Cdsn corneodesmosin ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cell-cell adhesion (ortholog); corneocyte desquamation (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); hypotrichosis 2 (ortholog); FOUND IN cornified envelope (ortholog); desmosome (ortholog); extracellular region (ortholog) NW_004955583 959544 968632 - 102024069 AGCD01075875;GBDJ01402797;XM_005414330;XM_005414331 XP_005414387;XP_005414388 MODEL 8856133 protein-coding Capn12 calpain 12 ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955468 761015 771387 + 102011970 AGCD01051738;AGCD01051739;GBCE01016701;XM_005399839;XM_005399840 XP_005399896;XP_005399897 MODEL 8801573 protein-coding Dvl1 dishevelled segment polarity protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); frizzled binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN axon (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955486 9464390 9469984 + 102024343 AGCD01059187;GBBH01061708;GBBH01061716;XM_013504189 XP_013359643 MODEL 8981652 protein-coding Brat1 BRCA1 associated ATM activator 1 ENCODES a protein that exhibits ribonuclease inhibitor activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955460 12662005 12674223 - 102012169 AGCD01048661;GBDI01062771;XM_005397864;XM_013521148;XM_013521149;XM_013521150;XM_013521151;XM_013521152 XP_005397921;XP_013376602;XP_013376603;XP_013376604;XP_013376605;XP_013376606 MODEL 8762880 protein-coding Actl6a actin like 6A ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blastocyst formation (ortholog); chromatin remodeling (ortholog); nervous system development (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; INO80 family mediated chromatin remodeling pathway; pancreatic cancer pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); asthma (ortholog); FOUND IN Ino80 complex (ortholog); npBAF complex (ortholog); NuA4 histone acetyltransferase complex (ortholog) NW_004955420 8745390 8764993 + 102012436 AGCD01020731;AGCD01020732;GBDF01053206;XM_005383042;XM_013513572 XP_005383099;XP_013369026 MODEL 8771879 protein-coding Epn1 epsin 1 ENCODES a protein that exhibits molecular sequestering activity (ortholog); transcription factor binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); embryonic organ development (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955567 669333 683283 - 102013769 AGCD01074423;AGCD01074424;GBCE01052885;GBCQ01011760;XM_005413292 XP_005413349 MODEL 8992088 protein-coding Gpr34 G protein-coupled receptor 34 ASSOCIATED WITH ovarian cyst (ortholog); FOUND IN plasma membrane (ortholog) NW_004955565 1096853 1103610 - 102026682 AGCD01074303;GBBH01036945;XM_005413246;XM_005413247 XP_005413303;XP_005413304 MODEL 8842008 protein-coding Atp11c ATPase phospholipid transporting 11C ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylethanolamine flippase activity (ortholog); phosphatidylserine flippase activity (ortholog); INVOLVED IN phospholipid translocation (ortholog); positive regulation of B cell differentiation (ortholog); pre-B cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955489 5394553 5567295 + 102003247 AGCD01059939;AGCD01059940;GBDF01079626;XM_005404550;XM_005404551;XM_013504484;XM_013504485 XP_005404607;XP_005404608;XP_013359938;XP_013359939 MODEL 8825724 protein-coding LOC102011407 olfactory receptor 9K2-like NW_004955458 2281743 2282727 + 102011407 AGCD01047223;XM_013520797 XP_013376251 MODEL 8820435 protein-coding Icmt isoprenylcysteine carboxyl methyltransferase ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity (ortholog); INVOLVED IN bone mineralization (ortholog); C-terminal protein methylation (ortholog); CAAX-box protein maturation (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955486 6280838 6289584 + 102013419 AGCD01059117;GBDF01088371;XM_005404099 XP_005404156 MODEL 8785570 pseudo LOC102003677 protein phosphatase 1 regulatory subunit 42-like NW_004955511 3024029 3025033 - 102003677 AGCD01066439 MODEL 8990774 protein-coding C5ar2 complement C5a receptor 2 INVOLVED IN negative regulation of interleukin-6 production (ortholog); negative regulation of neutrophil chemotaxis (ortholog); negative regulation of tumor necrosis factor production (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); basal plasma membrane (ortholog); plasma membrane (ortholog) NW_004955574 1221950 1242547 + 102008790 AGCD01075168;AGCD01075169;AGCD01075170;AGCD01075171;XM_005413863;XM_013509538;XM_013509539 XP_005413920;XP_013364992;XP_013364993 MODEL 8879373 pseudo LOC102006508 heterogeneous nuclear ribonucleoprotein K pseudogene NW_004955445 18587531 18589305 + 102006508 AGCD01039906 MODEL 8792310 protein-coding LOC102006855 ATP-binding cassette sub-family A member 13-like NW_004955765 1665 15270 + 102006855 AGCD01078307;GBDF01026194;XM_013510189 XP_013365643 MODEL 9042418 protein-coding LOC102009114 olfactory receptor 1F1-like NW_004955442 14172448 14196764 - 102009114 AGCD01037803;AGCD01037804;AGCD01037805;AGCD01037806;GBDF01061825;XM_005391855 XP_005391912 MODEL 8821751 protein-coding Lgi3 leucine rich repeat LGI family member 3 INVOLVED IN regulation of exocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH MUSCLE TONE ABNORMALITIES AND DISTAL SKELETAL DEFECTS (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); juxtaparanode region of axon (ortholog); synaptic vesicle (ortholog) NW_004955403 45634237 45644172 - 102004228 AGCD01002824;GBDK01189875;XM_005373650;XM_013513776 XP_005373707;XP_013369230 MODEL 39131988 rrna 5S_rRNA 5S ribosomal RNA 8801401 protein-coding LOC102017543 olfactory receptor 10P1-like NW_004955458 3094534 3095475 + 102017543 AGCD01047270;XM_005397250 XP_005397307 MODEL 39134127 misc_rna 7SK 7SK RNA 8838902 protein-coding Clec1a C-type lectin domain family 1 member A INVOLVED IN cell recognition (ortholog); defense response to fungus (ortholog); immune response (ortholog); ASSOCIATED WITH aspergillosis (ortholog) NW_004955413 7742753 7783299 + 102009032 AGCD01013830;AGCD01013831;GBDK01130331;XM_005378939;XM_013511524;XM_013511525;XM_013511526;XM_013511527 XP_005378996;XP_013366978;XP_013366979;XP_013366980;XP_013366981 MODEL 8876021 protein-coding Ccdc13 coiled-coil domain containing 13 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN axonemal central pair (ortholog); centriolar satellite (ortholog); centrosome (ortholog) NW_004955420 28061460 28107509 + 102026119 AGCD01021469;AGCD01021470;GBBH01139814;XM_005383534;XM_005383535 XP_005383591;XP_005383592 MODEL 8989914 pseudo LOC102008359 erythrocyte band 7 integral membrane protein pseudogene NW_004955572 890630 891453 - 102008359 AGCD01074927 MODEL 8881653 protein-coding Itgb1 integrin subunit beta 1 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); C-X3-C chemokine binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon extension (ortholog); basement membrane organization (ortholog); PARTICIPATES IN altered Reelin signaling pathway; glomerulonephritis pathway; integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); calcinosis (ortholog); cardiomyopathy (ortholog); FOUND IN cell surface; acrosomal vesicle (ortholog); adherens junction (ortholog) NW_004955462 4454809 4483227 + 102027823 AGCD01049227;GBBH01032241;GBCE01007166;XM_013521440 XP_013376894 MODEL 8850279 protein-coding Fbxl20 F-box and leucine rich repeat protein 20 INVOLVED IN behavioral fear response (ortholog); regulation of protein catabolic process at presynapse, modulating synaptic transmission (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); Schaffer collateral - CA1 synapse (ortholog); synapse (ortholog) NW_004955451 14097664 14201812 - 102025313 AGCD01043533;AGCD01043534;AGCD01043535;AGCD01043536;AGCD01043537;GBDJ01176814;XM_005394302;XM_005394303;XM_013519186;XM_013519187 XP_005394359;XP_005394360;XP_013374640;XP_013374641 MODEL 8785048 protein-coding Cfap300 cilia and flagella associated protein 300 ASSOCIATED WITH dextro-looped transposition of the great arteries (ortholog); genetic disease (ortholog); high grade glioma (ortholog) NW_004955412 5368983 5399406 + 102010563 AGCD01012632;GBDF01120319;XM_005377970 XP_005378027 MODEL 8792890 pseudo LOC102004004 ATPase inhibitor, mitochondrial pseudogene NW_004955533 1286264 1287849 - 102004004 AGCD01070353 MODEL 8971193 protein-coding Chrnb3 cholinergic receptor nicotinic beta 3 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); bipolar disorder (ortholog); cocaine dependence (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); dopaminergic synapse (ortholog); protein-containing complex (ortholog) NW_004955536 189881 229835 - 102022743 AGCD01070720;AGCD01070721;AGCD01070722;GBDI01244676;XM_013507722 XP_013363176 MODEL 8799081 ncrna LOC102009475 uncharacterized LOC102009475 NW_004955463 254981 270114 + 102009475 AGCD01049479;GBDF01303373;XR_263138 MODEL 8955547 protein-coding Il13ra2 interleukin 13 receptor subunit alpha 2 ENCODES a protein that exhibits cytokine receptor activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); immunoglobulin mediated immune response (ortholog); interleukin-13-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955490 708144 758195 + 102026754 AGCD01060082;AGCD01060083;AGCD01060084;AGCD01060085;AGCD01060086;GBCE01123394;XM_005404624;XM_013504555;XM_013504556;XM_013504557;XM_013504558;XM_013504559;XM_013504560 XP_005404681;XP_013360009;XP_013360010;XP_013360011;XP_013360012;XP_013360013;XP_013360014 MODEL 8970210 pseudo LOC102011021 TATA box-binding protein-associated factor RNA polymerase I subunit D pseudogene NW_004955502 102213 103039 + 102011021 AGCD01064232 MODEL 8889589 protein-coding Akap12 A-kinase anchoring protein 12 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955439 10241298 10262416 - 102004008 AGCD01035861;AGCD01035862;GBBH01051193;XM_005390585;XM_013517396 XP_005390642;XP_013372850 MODEL 8760621 protein-coding Elovl2 ELOVL fatty acid elongase 2 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); fatty acid elongase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); very long-chain fatty acid biosynthetic process (ortholog); ASSOCIATED WITH male infertility (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955465 3413923 3433558 + 102019043 AGCD01050378;GBDJ01127241;XM_005398829 XP_005398886 MODEL 39133995 misc_rna 7SK 7SK RNA 9035917 pseudo LOC102004389 atlastin-2-like NW_004955482 7328108 7330635 + 102004389 AGCD01057455;AGCD01057456 MODEL 8945552 protein-coding Cnr1 cannabinoid receptor 1 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); axonal fasciculation (ortholog); cannabinoid signaling pathway (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alcohol Withdrawal Delirium (ortholog); FOUND IN axon (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955411 15052151 15077320 - 102003006 AGCD01011929;AY303182;JN633197;XM_005377738;XM_013510704;XM_013510705 AAQ76976;AEO94875;XP_005377795;XP_013366158;XP_013366159 MODEL 8877944 protein-coding Triap1 TP53 regulated inhibitor of apoptosis 1 ENCODES a protein that exhibits p53 binding (ortholog); phosphatidic acid transfer activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955455 11195399 11198402 + 102011402 AGCD01045986;GBCQ01036220;XM_005396508 XP_005396565 MODEL 8917659 ncrna LOC102021620 uncharacterized LOC102021620 NW_004955405 19288876 19336365 - 102021620 AGCD01005034;AGCD01005035;GBCB01087858;XR_001235414 MODEL 8917459 pseudo LOC102012662 protein kinase C iota type pseudogene NW_004955422 13396657 13398480 + 102012662 AGCD01022823 MODEL 8909797 protein-coding Kcna4 potassium voltage-gated channel subfamily A member 4 ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Microcephaly, Cataracts, Impaired Intellectual Development, and Dystonia with Abnormal Striatum (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN asymmetric synapse (ortholog); axon (ortholog); axon initial segment (ortholog) NW_004955476 8621019 8624764 - 102018925 AGCD01055370;XM_005401759 XP_005401816 MODEL 39132227 rrna 5S_rRNA 5S ribosomal RNA 8869995 protein-coding Deup1 deuterosome assembly protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); glioblastoma (ortholog); FOUND IN deuterosome (ortholog) NW_004955414 1062968 1126698 - 102025452 AGCD01014757;GBBH01011302;GBCE01162883;XM_005379707;XM_013512047;XM_013512048;XM_013512049;XM_013512050;XM_013512051;XM_013512052 XP_005379764;XP_013367501;XP_013367502;XP_013367503;XP_013367504;XP_013367505;XP_013367506 MODEL 39134433 misc_rna 7SK 7SK RNA 39133868 misc_rna 7SK 7SK RNA 9032485 protein-coding Hps3 HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 INVOLVED IN eye pigmentation (ortholog); pigmentation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN BLOC-2 complex (ortholog); cytoplasm (ortholog) NW_004955448 438152 465955 + 102017614 AGCD01041231;AGCD01041232;GBDF01221349;XM_013518625 XP_013374079 MODEL 8934062 ncrna LOC102010262 uncharacterized LOC102010262 NW_004955482 9098479 9099552 - 102010262 AGCD01057562;GBDF01226253;XR_263851 MODEL 10194803 ncrna LOC106149900 uncharacterized LOC106149900 NW_004955456 569714 581804 - 106149900 AGCD01046208;GBDJ01119069;XR_001236366;XR_001236367 MODEL 8945604 protein-coding LOC102005424 trafficking protein particle complex subunit 6A NW_004955555 2169073 2183696 - 102005424 AGCD01073131;GBCQ01014265;XM_005412499;XM_005412500;XM_005412502;XM_013508760;XM_013508761;XM_013508762;XM_013508763 XP_005412556;XP_005412557;XP_005412559;XP_013364214;XP_013364215;XP_013364216;XP_013364217 MODEL 8972546 protein-coding Ap2b1 adaptor related protein complex 2 subunit beta 1 ENCODES a protein that exhibits clathrin binding (ortholog); clathrin-cargo adaptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); clathrin coat assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin adaptor complex (ortholog); clathrin coat (ortholog) NW_004955481 10061021 10175070 + 102017016 AGCD01057135;AGCD01057136;AGCD01057137;GBDF01008348;XM_005402876;XM_005402877;XM_005402881 XP_005402933;XP_005402934;XP_005402938 MODEL 9030338 protein-coding Anapc2 anaphase promoting complex subunit 2 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); negative regulation of gene expression (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); Fetal Growth Retardation (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleoplasm (ortholog) NW_004955513 5183472 5194253 - 102004743 AGCD01066961;GBDF01082252;XM_005408582 XP_005408639 MODEL 8712309 protein-coding Ccdc134 coiled-coil domain containing 134 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cerebellar granule cell differentiation (ortholog); cerebellum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955413 27248879 27265635 + 102023998 AGCD01014500;GBDK01039791;XM_005379367;XM_005379369 XP_005379424;XP_005379426 MODEL 39131309 protein-coding CD99L2 CD99 molecule like 2 8720063 protein-coding Gpr35 G protein-coupled receptor 35 ENCODES a protein that exhibits C-X-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); chemokine-mediated signaling pathway (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); plasma membrane (ortholog) NW_004955542 851895 856688 - 102015450 AGCD01071481;GBCE01072681;XM_005411154 XP_005411211 MODEL 8938727 protein-coding LOC102008010 melanoma-associated antigen 10-like NW_004955498 7052955 7064840 - 102008010 AGCD01063141;AGCD01063142;GBDF01251926;XM_013505532;XM_013505533;XM_013505534;XM_013505535 XP_013360986;XP_013360987;XP_013360988;XP_013360989 MODEL 8991322 protein-coding Cdt1 chromatin licensing and DNA replication factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); DNA replication checkpoint signaling (ortholog); mitotic DNA replication initiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN kinetochore (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955541 2683030 2687883 + 102027458 AGCD01071421;AGCD01071422;GBCE01072853;GBDF01221086;XM_013508010 XP_013363464 MODEL 8747811 protein-coding Icos inducible T cell costimulator ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); T cell costimulation (ortholog); T cell tolerance induction (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); arteriosclerosis (ortholog); celiac disease (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955457 10934390 10952318 - 102021098 AGCD01046960;GBDI01295537;XM_005397010;XM_005397011 XP_005397067;XP_005397068 MODEL 9016936 protein-coding Dvl2 dishevelled segment polarity protein 2 ENCODES a protein that exhibits frizzled binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); convergent extension involved in neural plate elongation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); dextro-looped transposition of the great arteries (ortholog); FOUND IN apical part of cell (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955467 9675912 9683996 + 102027735 AGCD01051521;GBDF01125281;XM_005399545;XM_005399546 XP_005399602;XP_005399603 MODEL 9013157 protein-coding Dexi Dexi homolog NW_004955442 7585954 7599413 + 102005514 AGCD01037625;GBDF01049155;XM_005391177;XM_005391178;XM_013518003 XP_005391234;XP_005391235;XP_013373457 MODEL 8857789 protein-coding Adhfe1 alcohol dehydrogenase iron containing 1 ENCODES a protein that exhibits hydroxyacid-oxoacid transhydrogenase activity (ortholog); INVOLVED IN ketone body catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955444 12706404 12745106 - 102017281 AGCD01039078;AGCD01039079;AGCD01039080;AGCD01039081;GBBH01059619;GBBH01208438;XM_005392153 XP_005392210 MODEL 8957780 protein-coding Epn2 epsin 2 INVOLVED IN embryonic organ development (ortholog); in utero embryonic development (ortholog); negative regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN clathrin coat of endocytic vesicle (ortholog); cytoplasm (ortholog); postsynaptic endocytic zone (ortholog) NW_004955467 419342 505909 - 102003745 AGCD01051219;AGCD01051220;AGCD01051221;AGCD01051222;AGCD01051223;GBCB01023639;XM_005399274;XM_005399276;XM_005399277 XP_005399331;XP_005399333;XP_005399334 MODEL 8866975 pseudo LOC102003679 glutamine synthetase pseudogene NW_004955431 4833847 4835235 + 102003679 AGCD01030014 MODEL 39131487 protein-coding C6orf163 chromosome 6 open reading frame 163 9005928 protein-coding Abcg4 ATP binding cassette subfamily G member 4 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to high density lipoprotein particle stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); endosome (ortholog) NW_004955412 20256467 20270172 + 102028393 AGCD01013001;GBDI01112120;XM_005378311;XM_013511081 XP_005378368;XP_013366535 MODEL 8955744 protein-coding Gatd1 glutamine amidotransferase class 1 domain containing 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog) NW_004955476 11350827 11354844 + 102011863 AGCD01055453;GBBH01185293;GBDF01127137;XM_013502980;XM_013502981 XP_013358434;XP_013358435 MODEL 9013676 protein-coding Efemp2 EGF-like fibulin extracellular matrix protein 2 ENCODES a protein that exhibits heparin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aorta development (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); artery development (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); aortic disease (ortholog); aortic dissection (ortholog); FOUND IN basement membrane (ortholog); elastic fiber (ortholog) NW_004955422 19463090 19470605 + 102026333 AGCD01023010;AGCD01023011;GBBH01165207;XM_005384452;XM_005384453;XM_005384454;XM_013513845 XP_005384509;XP_005384510;XP_005384511;XP_013369299 MODEL 8940082 ncrna LOC102006510 uncharacterized LOC102006510 NW_004955576 595097 604134 + 102006510 AGCD01075295;AGCD01075296;GBDF01017473;XR_001232460;XR_265072 MODEL 8811117 protein-coding LOC102006858 translationally-controlled tumor protein NW_004957308 14 1574 + 102006858 AGCD01080704;GBDI01329672;GBDJ01414259;XM_005415227 XP_005415284 MODEL 8821781 protein-coding Ccn3 cellular communication network factor 3 ENCODES a protein that exhibits hormone activity (ortholog); integrin binding (ortholog); Notch binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone regeneration (ortholog); cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); long QT syndrome (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955417 25218613 25225755 + 102006244 AGCD01018475;GBCB01111187;GBDI01264541;XM_005381909 XP_005381966 MODEL 8819933 protein-coding Itgb1bp1 integrin subunit beta 1 binding protein 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); integrin binding (ortholog); kinase binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); blood vessel diameter maintenance (ortholog); blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bone development disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955487 5134135 5146449 - 102023705 AGCD01059322;GBDI01067015;XM_005404395 XP_005404452 MODEL 8979663 protein-coding Brca1 BRCA1 DNA repair associated ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to indole-3-methanol (ortholog); cellular response to ionizing radiation (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; forkhead class A signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-B complex (ortholog); BRCA1-BARD1 complex (ortholog) NW_004955451 16819463 16870780 - 102029928 AGCD01043709;AGCD01043710;AGCD01043711;GBDF01225401;GBDF01304989;JN414194;XM_005394496;XM_013519228;XM_013519229;XM_013519230;XM_013519231;XR_001235969 AEP18221;XP_005394553;XP_013374682;XP_013374683;XP_013374684;XP_013374685 MODEL 39134128 misc_rna 7SK 7SK RNA 9012667 pseudo LOC102017544 L-lactate dehydrogenase A chain pseudogene NW_004955458 4711786 4713302 + 102017544 AGCD01047431 MODEL 8905748 protein-coding Clec1b C-type lectin domain family 1 member B ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN platelet formation (ortholog); signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955413 7812750 7821620 - 102009821 AGCD01013831;AGCD01013832;GBBH01066126;XM_005378941 XP_005378998 MODEL 8945846 protein-coding Elovl3 ELOVL fatty acid elongase 3 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955485 8141818 8144458 - 102020124 AGCD01058692;XM_005403852;XM_013504025 XP_005403909;XP_013359479 MODEL 9003816 ncrna LOC102008361 uncharacterized LOC102008361 NW_004955448 3629090 3639590 + 102008361 AGCD01041336;XR_001235764;XR_262459 MODEL 9006970 protein-coding Capn13 calpain 13 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955469 12497890 12569453 - 102005361 AGCD01052582;AGCD01052583;GBDI01317938;XM_013522570 XP_013378024 MODEL 8861157 ncrna LOC102021621 uncharacterized LOC102021621 NW_004955405 29311366 29324168 - 102021621 AGCD01005251;GBDF01207441;XR_259409 MODEL 8962552 protein-coding Cfap36 cilia and flagella associated protein 36 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN ciliary base (ortholog); ciliary transition zone (ortholog) NW_004955424 27522324 27547437 - 102006685 AGCD01025118;AGCD01025119;GBDF01008484;XM_005385771 XP_005385828 MODEL 9052437 protein-coding Cdv3 CDV3 homolog ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955501 4984239 4999414 - 102029534 AGCD01064148;GBDJ01022875;GBDK01076798;XM_005406818 XP_005406875 MODEL 8760477 protein-coding Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit ENCODES a protein that exhibits P-type potassium:proton transporter activity (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN potassium ion homeostasis (ortholog); regulation of pH (ortholog); response to metal ion (ortholog); ASSOCIATED WITH hypokalemia (ortholog); lung cancer (ortholog); Metabolic Syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955497 225401 251024 + 102008640 AGCD01062403;AGCD01062404;GBDJ01132176;GBDJ01132177;XM_013505518 XP_013360972 MODEL 8780799 protein-coding Chrnb4 cholinergic receptor nicotinic beta 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); behavioral response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); chronic obstructive pulmonary disease (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell junction (ortholog); cholinergic synapse (ortholog) NW_004955450 1013897 1030232 - 102013030 AGCD01042349;GBDJ01147141;XM_005393458;XM_005393459 XP_005393515;XP_005393516 MODEL 39131990 rrna 5S_rRNA 5S ribosomal RNA 8825794 protein-coding Lgi4 leucine rich repeat LGI family member 4 INVOLVED IN adult locomotory behavior (ortholog); glial cell development (ortholog); glial cell proliferation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); arthrogryposis multiplex congenita-1 (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955468 4441808 4456884 - 102012625 AGCD01051910;GBDF01017792;XM_013522439;XM_013522440;XR_001236912 XP_013377893;XP_013377894 MODEL 8798402 protein-coding Il15 interleukin 15 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to vitamin D (ortholog); extrathymic T cell selection (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955471 1496352 1583919 - 102011302 AGCD01052985;GBDJ01349954;XM_005400859;XM_005400860;XM_013522919 XP_005400916;XP_005400917;XP_013378373 MODEL 39133996 misc_rna 7SK 7SK RNA 8822607 protein-coding Akap13 A-kinase anchoring protein 13 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); MAP kinase scaffold activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); bone development (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); cell cortex (ortholog) NW_004955416 19006206 19327523 - 102014136 AGCD01017414;AGCD01017415;AGCD01017416;AGCD01017417;AGCD01017418;AGCD01017419;AGCD01017420;AGCD01017421;AGCD01017422;GBCE01117069;XM_005381591;XM_013512530;XM_013512531;XM_013512532;XM_013512533;XM_013512534 XP_005381648;XP_013367984;XP_013367985;XP_013367986;XP_013367987;XP_013367988 MODEL 8950525 protein-coding Abcg5 ATP binding cassette subfamily G member 5 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); negative regulation of intestinal cholesterol absorption (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); cholestasis (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); ATP-binding cassette (ABC) transporter complex (ortholog) NW_004955441 10964588 10987771 - 102028684 AGCD01037098;GBBH01022720;XM_005390938 XP_005390995 MODEL 8753411 ncrna LOC102009116 uncharacterized LOC102009116 NW_004955561 1295394 1311775 + 102009116 AGCD01073847;AGCD01073848;GBDF01260254;XR_001232356 MODEL 8726338 protein-coding Anapc4 anaphase promoting complex subunit 4 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) NW_004955443 19620480 19653179 - 102021287 AGCD01038631;GBBH01141916;XM_005392036;XM_005392037 XP_005392093;XP_005392094 MODEL 8851104 protein-coding Cnr2 cannabinoid receptor 2 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN cannabinoid signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); leukocyte chemotaxis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Animal Disease Models (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955452 3763742 3795069 - 102023104 AGCD01043939;AGCD01043940;AGCD01043941;AGCD01043942;AGCD01043943;GBDI01052749;XM_005394784;XM_005394785;XM_005394787;XM_013519500;XM_013519501;XM_013519502 XP_005394841;XP_005394842;XP_005394844;XP_013374954;XP_013374955;XP_013374956 MODEL 8826631 protein-coding LOC102012663 adenylate kinase isoenzyme 1 NW_004955495 3193444 3209238 - 102012663 AGCD01061835;AGCD01061836;AGCD01061837;GBDF01307680;XM_005405718;XR_001231378;XR_264139;XR_264140;XR_264141 XP_005405775 MODEL 8883480 protein-coding Trib1 tribbles pseudokinase 1 ENCODES a protein that exhibits mitogen-activated protein kinase kinase binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955461 494003 501928 + 102030050 AGCD01048795;GBDF01159528;XM_005397987 XP_005398044 MODEL 39134434 misc_rna 7SK 7SK RNA 8916741 protein-coding Actl6b actin like 6B INVOLVED IN chromatin remodeling (ortholog); dendrite development (ortholog); nervous system development (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN nBAF complex (ortholog); nucleus (ortholog); SWI/SNF complex (ortholog) NW_004955573 259133 272043 + 102016961 AGCD01074971;AGCD01074972;GBDF01116752;XM_005413703 XP_005413760 MODEL 39132229 rrna 5S_rRNA 5S ribosomal RNA 8737484 pseudo LOC102004015 N-formyl peptide receptor 2-like NW_004955558 701686 702721 - 102004015 AGCD01073385 MODEL 8699698 protein-coding LOC102011408 zinc finger protein 354A NW_004955408 1675669 1691620 + 102011408 AGCD01007971;AGCD01007972;AGCD01007973;GBCB01038314;GBCB01038318;XM_013507993 XP_013363447 MODEL 8781384 protein-coding Fbxl21 Putative F-box/LRR-repeat protein 21 INVOLVED IN entrainment of circadian clock by photoperiod (ortholog); protein ubiquitination (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955408 30997793 31012276 + 102012832 AGCD01008819;GBDF01052776;XM_005376488;XM_005376489;XM_005376490;XM_005376491;XM_005376492;XM_005376493;XM_013506760;XM_013506765;XM_013506771;XM_013506777;XM_013506785;XM_013506794 XP_005376545;XP_005376546;XP_005376547;XP_005376548;XP_005376549;XP_005376550;XP_013362214;XP_013362219;XP_013362225;XP_013362231;XP_013362239;XP_013362248 MODEL 8982386 protein-coding LOC102010274 cationic trypsin NW_004955494 1011732 1014914 - 102010274 AGCD01061390;XM_005405392 XP_005405449 MODEL 8821789 protein-coding LOC102006512 protein FAM170A-like NW_004955448 3085060 3094177 + 102006512 AGCD01041301;GBDK01265185;XM_005393037;XM_013518614 XP_005393094;XP_013374068 MODEL 8937414 pseudo LOC102005429 uncharacterized LOC102005429 NW_004955585 307477 456009 + 102005429 AGCD01075996;AGCD01075997 MODEL 8736710 protein-coding Itgb1bp2 integrin subunit beta 1 binding protein 2 ENCODES a protein that exhibits calcium ion binding (ortholog); integrin binding (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); dilated cardiomyopathy (ortholog); melanoma (ortholog); FOUND IN Z disc (ortholog) NW_004955475 10854148 10858802 + 102007424 AGCD01055119;GBCB01022012;XM_005401667 XP_005401724 MODEL 8737056 protein-coding LOC102004392 potassium voltage-gated channel subfamily F member 1 NW_004955487 5780814 5785142 + 102004392 AGCD01059346;GBDJ01337648;XM_005404421 XP_005404478 MODEL 9053982 protein-coding Ccdc136 coiled-coil domain containing 136 INVOLVED IN acrosome assembly (ortholog); single fertilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog) NW_004955479 9601121 9627763 + 102029859 AGCD01056484;AGCD01056485;GBCB01075696;GBDF01209212;XM_013503296;XM_013503297;XM_013503298 XP_013358750;XP_013358751;XP_013358752 MODEL 8791664 protein-coding Cd99l2 CD99 molecule like 2 INVOLVED IN diapedesis (ortholog); homotypic cell-cell adhesion (ortholog); positive regulation of neutrophil extravasation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN adherens junction (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955498 6529039 6591728 - 102004181 AGCD01063114;AGCD01063115;AGCD01063116;AGCD01063117;AGCD01063118;GBCB01002845;XM_013505530 XP_013360984 MODEL 39133869 misc_rna 7SK 7SK RNA 8820361 ncrna LOC102009476 uncharacterized LOC102009476 NW_004955463 10007303 10028051 - 102009476 AGCD01049804;AGCD01049805;GBDF01223582;XR_263166 MODEL 8725054 protein-coding Ap2m1 adaptor related protein complex 2 subunit mu 1 ENCODES a protein that exhibits clathrin-cargo adaptor activity (ortholog); disordered domain specific binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of protein localization to plasma membrane (ortholog); positive regulation of receptor internalization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 60 with seizures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog) NW_004955420 23281720 23290430 - 102026752 AGCD01021240;GBCB01006751;XM_005383348;XM_005383349 XP_005383405;XP_005383406 MODEL 8824295 protein-coding Dffa DNA fragmentation factor subunit alpha ENCODES a protein that exhibits deoxyribonuclease inhibitor activity (ortholog); INVOLVED IN negative regulation of apoptotic DNA fragmentation (ortholog); negative regulation of execution phase of apoptosis (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955486 3273712 3274510 + 102020676 AGCD01059020;XM_013504141 XP_013359595 MODEL 8979162 protein-coding Kcna5 potassium voltage-gated channel subfamily A member 5 ENCODES a protein that exhibits alpha-actinin binding (ortholog); delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); membrane hyperpolarization (ortholog); membrane repolarization during atrial cardiac muscle cell action potential (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiac Arrhythmias (ortholog); Experimental Autoimmune Myocarditis (ortholog); FOUND IN cell surface (ortholog); intercalated disc (ortholog); intracellular canaliculus (ortholog) NW_004955413 2835730 2838761 + 102008299 AGCD01013562;GBDJ01265359;XM_005378748 XP_005378805 MODEL 8997832 protein-coding Dvl3 dishevelled segment polarity protein 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); frizzled binding (ortholog); protease binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); autosomal dominant Robinow syndrome 3 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 23291650 23301695 - 102030085 AGCD01021240;AGCD01021241;GBDI01077356;GBDK01277196;XM_013513361 XP_013368815 MODEL 8772156 protein-coding LOC102003680 uncharacterized LOC102003680 NW_004955513 4114603 4116964 + 102003680 AGCD01066920;GBDK01076605;XM_013506579 XP_013362033 MODEL 9034611 protein-coding Epn3 epsin 3 ENCODES a protein that exhibits EH domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); diastolic heart failure (ortholog); lung cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955451 11209454 11218427 - 102011935 AGCD01043342;GBBH01089702;XM_013519085;XM_013519086;XM_013519088;XM_013519089;XM_013519090 XP_013374539;XP_013374540;XP_013374542;XP_013374543;XP_013374544 MODEL 10247351 ncrna LOC106149901 uncharacterized LOC106149901 NW_004955456 15079998 15082331 + 106149901 AGCD01046662;GBDK01263026;XR_001236368 MODEL 9040341 protein-coding C7 complement C7 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); intracellular sodium ion homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955426 25173463 25230897 + 102012222 AGCD01026705;AGCD01026706;AGCD01026707;AGCD01026708;AGCD01026709;XM_013514936 XP_013370390 MODEL 9039473 ncrna LOC102006859 uncharacterized LOC102006859 NW_004955451 17177722 17181204 - 102006859 AGCD01043726;AGCD01043727;XR_262622 MODEL 8946244 protein-coding Efhb EF-hand domain family member B ENCODES a protein that exhibits calcium ion sensor activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of store-operated calcium entry (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955430 11932753 11986985 - 102004190 AGCD01029468;AGCD01029469;AGCD01029470;AGCD01029471;AGCD01029472;GBDJ01405223;XM_005387460;XM_013515691 XP_005387517;XP_013371145 MODEL 8860233 protein-coding Ccn4 cellular communication network factor 4 INVOLVED IN bone development (ortholog); glucose homeostasis (ortholog); negative regulation of chondrocyte differentiation (ortholog); ASSOCIATED WITH Airway Remodeling (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955461 7748399 7780359 + 102015386 AGCD01048922;GBDF01027727;XM_005398024;XM_005398025;XM_013521349 XP_005398081;XP_005398082;XP_013376803 MODEL 8953768 pseudo LOC102017545 neurofilament heavy polypeptide pseudogene NW_004955408 5855363 5857838 + 102017545 AGCD01008158 MODEL 8825996 protein-coding Elovl4 ELOVL fatty acid elongase 4 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN circadian rhythm (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Ataxia (ortholog); autosomal recessive congenital ichthyosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955502 7764451 7774503 - 102016495 AGCD01064461;GBCC01001147;XM_013505842 XP_013361296 MODEL 8712989 protein-coding Cnrip1 cannabinoid receptor interacting protein 1 ENCODES a protein that exhibits type 1 cannabinoid receptor binding (ortholog); INVOLVED IN negative regulation of signaling receptor activity (ortholog); regulation of signaling receptor activity (ortholog); regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955424 16563499 16588711 + 102022406 AGCD01024745;GBBH01102483;GBCQ01177682;XM_005385669 XP_005385726 MODEL 8841385 ncrna LOC102008011 uncharacterized LOC102008011 NW_004955426 3353899 3375511 + 102008011 AGCD01026078;GBDI01255537;XR_261184;XR_261185 MODEL 8969408 pseudo LOC102011022 zinc finger protein 649-like NW_004955503 3712980 3714698 + 102011022 AGCD01064640 MODEL 8895963 protein-coding Capn14 calpain 14 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955469 12899174 12929408 - 102023251 AGCD01052588;AGCD01052589;GBDK01133219;XM_013522553;XM_013522554;XM_013522555;XM_013522556 XP_013378007;XP_013378008;XP_013378009;XP_013378010 MODEL 8924737 protein-coding Icoslg inducible T cell costimulator ligand ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN positive regulation of interleukin-4 production (ortholog); T follicular helper cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); celiac disease (ortholog); cervical cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955407 41190875 41197521 + 102022674 AGCD01007861;GBBH01118928;GBDF01041989;XM_013505381 XP_013360835 MODEL 8762565 protein-coding Ccdc137 coiled-coil domain containing 137 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955506 1425874 1433741 - 102029882 AGCD01065263;GBDI01078469;XM_005407266;XM_013506051 XP_005407323;XP_013361505 MODEL 8861288 ncrna LOC102004017 uncharacterized LOC102004017 NW_004955444 18696740 18734262 + 102004017 AGCD01039250;AGCD01039251;AGCD01039252;GBBH01146836;XR_001235489;XR_262282 MODEL 8858256 protein-coding Cfap410 cilia and flagella associated protein 410 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); axial spondylometaphyseal dysplasia (ortholog); cone-rod dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955407 41120820 41128089 + 102026604 AGCD01007856;GBDF01192997;XM_005375863 XP_005375920 MODEL 9056989 protein-coding Fbxl22 F-box and leucine rich repeat protein 22 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog); Z disc (ortholog) NW_004955450 11719678 11728093 - 102010325 AGCD01042671;AGCD01042672;AGCD01042673;GBDF01281568;GBDK01305141;XM_013518843 XP_013374297 MODEL 8920981 protein-coding Atp13a1 ATPase 13A1 ENCODES a protein that exhibits membrane protein dislocase activity (ortholog); INVOLVED IN extraction of mislocalized protein from ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955524 2365605 2378459 + 102016412 AGCD01068811;GBDF01047188;XM_005409647 XP_005409704 MODEL 39131331 protein-coding HPS3 HPS3 biosis of lysosomal organelles complex 2 subunit 1 39131991 rrna 5S_rRNA 5S ribosomal RNA 39134129 misc_rna 7SK 7SK RNA 8884637 protein-coding Il15ra interleukin 15 receptor subunit alpha ENCODES a protein that exhibits interleukin-15 receptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-15-mediated signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); interleukin-15 receptor complex (ortholog) NW_004955421 22590168 22612835 - 102009192 AGCD01022140;AGCD01022141;GBDJ01025096;XM_013513670;XM_013513671;XM_013513672 XP_013369124;XP_013369125;XP_013369126 MODEL 9003256 protein-coding Clec20a C-type lectin domain containing 20A NW_004955406 17901044 17930323 - 102019565 AGCD01006016;GBDF01039499;XM_005374911;XM_005374912;XM_005374913;XM_005374914;XM_005374915;XM_005374916;XM_013521068 XP_005374968;XP_005374969;XP_005374970;XP_005374971;XP_005374972;XP_005374973;XP_013376522 MODEL 8802541 protein-coding Lgmn legumain ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); endopeptidase activator activity (ortholog); peptidase activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); associative learning (ortholog); cellular response to amyloid-beta (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955438 14905856 14938722 - 102027677 AGCD01035355;AGCD01035356;GBBH01061269;XM_005390332 XP_005390389 MODEL 8799990 protein-coding Adi1 acireductone dioxygenase 1 ENCODES a protein that exhibits acireductone dioxygenase (Ni2+-requiring) activity (ortholog); acireductone dioxygenase [iron(II)-requiring] activity (ortholog); oxidoreductase activity (ortholog); INVOLVED IN L-methionine cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 3816428 3822663 + 102018293 AGCD01059294;GBDF01081975;XM_013504345 XP_013359799 MODEL 8715479 protein-coding Itgb2 integrin subunit beta 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); cargo receptor activity (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); amyloid-beta clearance (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; integrin mediated signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute promyelocytic leukemia (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); integrin alphaD-beta2 complex (ortholog) NW_004955407 41779849 41805637 - 102010671 AGCD01007882;GBBH01033820;XM_005375904;XM_005375905;XM_005375906;XM_013505502;XM_013505508;XM_013505517;XM_013505519;XM_013505523 XP_005375961;XP_005375962;XP_005375963;XP_013360956;XP_013360962;XP_013360971;XP_013360973;XP_013360977 MODEL 39133997 misc_rna 7SK 7SK RNA 8959247 ncrna LOC102008363 uncharacterized LOC102008363 NW_004955449 1293468 1297009 + 102008363 AGCD01041795;GBDF01187862;XR_262482 MODEL 8713505 protein-coding Gpr37 G protein-coupled receptor 37 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); heat shock protein binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to reactive oxygen species (ortholog); dendrite development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Lewy body dementia (ortholog); malignant mesothelioma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955479 6061424 6080129 - 102017872 AGCD01056375;GBDF01251628;XM_005402343 XP_005402400 MODEL 8768024 ncrna LOC102021625 uncharacterized LOC102021625 NW_004955454 1559046 1567112 + 102021625 AGCD01044973;GBCE01105695;XR_001236256;XR_001236257 MODEL 9054702 protein-coding Abcg8 ATP binding cassette subfamily G member 8 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); negative regulation of intestinal cholesterol absorption (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); ATP-binding cassette (ABC) transporter complex (ortholog); plasma membrane (ortholog) NW_004955441 10982307 11004789 + 102027905 AGCD01037098;GBDF01226499;XM_005390935;XM_005390936 XP_005390992;XP_005390993 MODEL 8782246 protein-coding Anapc5 anaphase promoting complex subunit 5 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog); spindle (ortholog) NW_004955482 6951496 6980498 + 102017573 AGCD01057433;GBDF01011272;XM_005403131;XM_005403132 XP_005403188;XP_005403189 MODEL 9058565 protein-coding Trib2 tribbles pseudokinase 2 ENCODES a protein that exhibits nucleotide binding (ortholog); protein kinase activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955487 6889571 6915068 + 102008735 AGCD01059386;GBCE01170233;XM_005404436;XM_013504382;XM_013504383 XP_005404493;XP_013359836;XP_013359837 MODEL 39134435 misc_rna 7SK 7SK RNA 8825727 pseudo LOC102011411 60S ribosomal protein L18a pseudogene NW_004955459 4048909 4049495 + 102011411 AGCD01048022 MODEL 8838413 protein-coding Cdx1 caudal type homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); methyl-CpG binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone morphogenesis (ortholog); pattern specification process (ortholog); ASSOCIATED WITH lung cancer (ortholog) NW_004955415 4337903 4355782 - 102018384 AGCD01015969;GBDI01192037;XM_005380585 XP_005380642 MODEL 8842883 protein-coding Gatd3 glutamine amidotransferase class 1 domain containing 3 ASSOCIATED WITH autistic disorder (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955407 41247749 41255369 - 102023005 AGCD01007862;AGCD01007863;GBBH01031990;GBDI01008445;XM_013505403 XP_013360857 MODEL 9005236 ncrna LOC102003682 uncharacterized LOC102003682 NW_004955432 17288234 17299687 - 102003682 AGCD01031120;GBDF01039986;XR_001234642;XR_261531 MODEL 9050991 pseudo LOC102006513 nucleolar protein 56-like NW_004955448 11571175 11572111 + 102006513 AGCD01041528 MODEL 8780625 protein-coding LOC102005435 beta-defensin 33-like NW_004955403 53686697 53694266 + 102005435 AGCD01003067;AGCD01003068;AGCD01003069;GBDK01170251;XM_005373836 XP_005373893 MODEL 9012376 pseudo LOC102004394 60S ribosomal protein L36 pseudogene NW_004955491 6461282 6485923 + 102004394 AGCD01060532;AGCD01060533 MODEL 8777558 protein-coding Akap14 A-kinase anchoring protein 14 ENCODES a protein that exhibits protein kinase A binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); sperm fibrous sheath (ortholog) NW_004955534 120603 137227 - 102006952 AGCD01070439;AGCD01070440;GBDF01249690;XM_005410427;XM_013507698 XP_005410484;XP_013363152 MODEL 8935277 ncrna LOC102009117 uncharacterized LOC102009117 NW_004955563 897520 906409 - 102009117 AGCD01074095;GBDF01019723;XR_001232368;XR_265015 MODEL 39133998 misc_rna 7SK 7SK RNA 8786433 protein-coding LOC102012664 guanylate-binding protein 5 NW_004955423 5021524 5040124 + 102012664 AGCD01023551;AGCD01023552;AGCD01023553;GBDK01006467;XM_005385100 XP_005385157 MODEL 39133870 misc_rna 7SK 7SK RNA 39132231 rrna 5S_rRNA 5S ribosomal RNA 8790754 protein-coding Cda cytidine deaminase ENCODES a protein that exhibits cytidine deaminase activity (ortholog); identical protein binding (ortholog); nucleoside binding (ortholog); INVOLVED IN cellular response to external biotic stimulus (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN cytosol (ortholog) NW_004955452 1131968 1156777 + 102020194 AGCD01043832;AGCD01043833;GBCQ01064996;XM_005394682 XP_005394739 MODEL 8860249 protein-coding Chrnd cholinergic receptor nicotinic delta subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); musculoskeletal movement (ortholog); regulation of membrane potential (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Breast Cancer, Familial (ortholog); centronuclear myopathy (ortholog); congenital myasthenic syndrome (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) NW_004955453 3433915 3440534 - 102016444 AGCD01044658;GBBH01073781;XM_005395377;XM_013520002;XM_013520003 XP_005395434;XP_013375456;XP_013375457 MODEL 9049102 pseudo LOC102009479 60S ribosomal protein L26-like NW_004955466 1763067 1764140 + 102009479 AGCD01050717 MODEL 8960158 protein-coding Dffb DNA fragmentation factor subunit beta ENCODES a protein that exhibits DNA binding (ortholog); DNA nuclease activity (ortholog); enzyme binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); apoptotic DNA fragmentation (ortholog); DNA catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chromosome Breakage (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955486 7836013 7849875 - 102021247 AGCD01059138;GBDK01277050;XM_005404126;XM_005404127;XM_005404128;XM_005404129;XM_005404131;XM_013504195 XP_005404183;XP_005404184;XP_005404185;XP_005404186;XP_005404188;XP_013359649 MODEL 8962386 protein-coding Ap2s1 adaptor related protein complex 2 subunit sigma 1 INVOLVED IN postsynaptic neurotransmitter receptor internalization (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN AP-2 adaptor complex (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); glutamatergic synapse (ortholog) NW_004955574 835272 845710 - 102030361 AGCD01075131;GBDK01017755;XM_005413843;XM_005413844 XP_005413900;XP_005413901 MODEL 8714532 protein-coding Dxo decapping exoribonuclease ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); magnesium ion binding (ortholog); mRNA 5'-diphosphatase activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); NAD-cap decapping (ortholog); nuclear mRNA surveillance (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 482866 484989 - 102007366 AGCD01034137;GBBH01005656;XM_005389406 XP_005389463 MODEL 8872726 protein-coding LOC102004019 eppin NW_004955445 11687818 11693955 + 102004019 AGCD01039713;GBDF01009129;XM_005392422 XP_005392479 MODEL 8979142 ncrna LOC102006863 uncharacterized LOC102006863 NW_004955452 9730790 9732267 + 102006863 AGCD01044258;GBDF01076687;XR_001236011;XR_001236012;XR_262671 MODEL 8999503 protein-coding Brca2 BRCA2 DNA repair associated ENCODES a protein that exhibits double-stranded DNA binding (ortholog); gamma-tubulin binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cell population proliferation (ortholog); cellular response to ionizing radiation (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN BRCA2-MAGE-D1 complex (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955431 13449287 13526878 - 102011896 AGCD01030308;GBCB01111140;JN414336;XM_005387715;XM_005387716;XM_005387717;XM_005387718;XM_005387719;XM_005387720;XM_013515889;XM_013515890 AEP18373;XP_005387772;XP_005387773;XP_005387774;XP_005387775;XP_005387776;XP_005387777;XP_013371343;XP_013371344 MODEL 39134130 misc_rna 7SK 7SK RNA 9020099 protein-coding Ccn5 cellular communication network factor 5 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); regulation of cell growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955445 12623333 12640127 - 102016645 AGCD01039759;AGCD01039760;AGCD01039761;GBDK01061750;XM_005392466;XM_013518365 XP_005392523;XP_013373819 MODEL 8798750 ncrna LOC102017548 uncharacterized LOC102017548 NW_004955409 22184677 22188277 - 102017548 AGCD01010027;AGCD01010028;AGCD01010029;GBDF01068620;XR_259786 MODEL 8882966 protein-coding Elovl5 ELOVL fatty acid elongase 5 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dendritic tree (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955411 2747232 2812544 + 102011288 AGCD01011516;AGCD01011517;AGCD01011518;GBDF01007036;XM_005377606 XP_005377663 MODEL 8944003 ncrna LOC102008014 uncharacterized LOC102008014 NW_004955427 4746086 4759360 - 102008014 AGCD01026973;GBDF01305344;XR_261235 MODEL 9056345 ncrna LOC102011023 uncharacterized LOC102011023 NW_004955504 1257357 1259714 - 102011023 AGCD01064836;GBDF01264466;XR_264285 MODEL 8963761 protein-coding Capn15 calpain 15 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); INVOLVED IN brain development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955442 16649600 16674252 - 102026482 AGCD01037905;GBDK01236677;XM_005391642;XM_005391643;XM_013517816;XM_013517817 XP_005391699;XP_005391700;XP_013373270;XP_013373271 MODEL 10100645 ncrna LOC106149902 uncharacterized LOC106149902 NW_004955456 14900042 14902337 - 106149902 AGCD01046655;GBDF01013677;XR_001236370 MODEL 8760038 protein-coding Abhd1 abhydrolase domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955469 9092074 9097635 + 102021232 AGCD01052489;GBDF01176276;XM_005400458;XM_005400459;XM_005400460;XM_005400461 XP_005400515;XP_005400516;XP_005400517;XP_005400518 MODEL 8940434 protein-coding Anapc7 anaphase promoting complex subunit 7 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); brain development (ortholog); protein branched polyubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); heterochromatin (ortholog); intercellular bridge (ortholog) NW_004955482 7302853 7328145 - 102020668 AGCD01057454;AGCD01057455;GBCQ01072880;XM_005403142;XM_013503736 XP_005403199;XP_013359190 MODEL 8730705 protein-coding Ccdc138 coiled-coil domain containing 138 NW_004955470 12249279 12305099 + 102006335 AGCD01052925;AGCD01052926;GBCE01123158;GBDF01082256;XM_013522754;XM_013522755 XP_013378208;XP_013378209 MODEL 8748129 protein-coding Kcna6 potassium voltage-gated channel subfamily A member 6 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); plasma membrane (ortholog) NW_004955413 2614685 2676292 + 102006231 AGCD01013558;GBDJ01143174;XM_005378741;XM_005378742 XP_005378798;XP_005378799 MODEL 8981962 protein-coding Gatm glycine amidinotransferase ENCODES a protein that exhibits amidinotransferase activity (ortholog); glycine amidinotransferase activity (ortholog); INVOLVED IN creatine biosynthetic process (ortholog); embryonic liver development (ortholog); kidney development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; creatine metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute kidney failure (ortholog); AGAT deficiency (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955409 8068524 8084603 + 102020986 AGCD01009377;GBBH01011356;XM_005376731 XP_005376788 MODEL 8756559 protein-coding Clec3a C-type lectin domain family 3 member A ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955522 1203559 1211562 + 102024945 AGCD01068357;XM_005409341 XP_005409398 MODEL 8763191 protein-coding Actl7a actin like 7A INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH bladder urothelial carcinoma (ortholog); male infertility (ortholog); spermatogenic failure 86 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955419 18102980 18106405 - 102021767 AGCD01020168;GBDF01005069;XM_005382760 XP_005382817 MODEL 8728890 protein-coding LOC102009120 leukocyte-associated immunoglobulin-like receptor 1 NW_004955567 1481960 1491331 - 102009120 AGCD01074476;GBBH01229034;XM_013509284;XM_013509285;XM_013509286;XM_013509287;XM_013509288 XP_013364738;XP_013364739;XP_013364740;XP_013364741;XP_013364742 MODEL 39131992 rrna 5S_rRNA 5S ribosomal RNA 8871301 protein-coding Efhc1 EF-hand domain containing 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN cerebral cortex cell migration (ortholog); flagellated sperm motility (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955411 5624510 5676165 - 102012618 AGCD01011654;GBBH01114393;GBDF01002191;XM_013510761 XP_013366215 MODEL 8773914 protein-coding LOC102010275 fer-1-like protein 4 NW_004955422 25848531 25882747 + 102010275 AGCD01023269;GBCQ01116103;XM_013514202 XP_013369656 MODEL 8815291 protein-coding Il16 interleukin 16 ENCODES a protein that exhibits CD4 receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN induction of positive chemotaxis (ortholog); leukocyte chemotaxis (ortholog); positive regulation of inflammatory response (ortholog); ASSOCIATED WITH allergic disease (ortholog); borna disease (ortholog); Brain Injuries (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog) NW_004955416 11876317 11987548 + 102023029 AGCD01017193;AGCD01017194;AGCD01017195;AGCD01017196;GBDI01361041;XM_005381442;XM_005381443;XM_005381444;XM_005381449 XP_005381499;XP_005381500;XP_005381501;XP_005381506 MODEL 8890490 protein-coding Itgb3 integrin subunit beta 3 ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); cell adhesion molecule binding (ortholog); cell adhesion receptor activity (ortholog); INVOLVED IN apolipoprotein A-I-mediated signaling pathway (ortholog); apoptotic cell clearance (ortholog); blood coagulation, fibrin clot formation (ortholog); PARTICIPATES IN abciximab pharmacodynamics pathway; ephrin - ephrin receptor bidirectional signaling axis; eptifibatide pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myeloid leukemia (ortholog); Arterial Occlusive Diseases (ortholog); FOUND IN alpha9-beta1 integrin-ADAM8 complex (ortholog); alphav-beta3 integrin-HMGB1 complex (ortholog); alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog) NW_004955478 9788192 9830254 - 102010257 AGCD01056097;AGCD01056098;GBDI01278989;XM_005402248 XP_005402305 MODEL 9028100 pseudo LOC102004399 suppressor of cytokine signaling 5-like NW_004955495 3002495 3005343 + 102004399 AGCD01061814;AGCD01061815 MODEL 9056329 protein-coding Cnst consortin, connexin sorting protein ENCODES a protein that exhibits connexin binding (ortholog); phosphatase binding (ortholog); INVOLVED IN positive regulation of Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog); trans-Golgi network (ortholog) NW_004955406 9441441 9531792 + 102010863 AGCD01005820;AGCD01005821;AGCD01005822;AGCD01005823;AGCD01005824;AGCD01005825;AGCD01005826;GBDF01125151;XM_013520444 XP_013375898 MODEL 8707504 protein-coding C8a complement C8 alpha chain ENCODES a protein that exhibits complement binding (ortholog); protein-containing complex binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955464 2806859 2874444 - 102023240 AGCD01049965;AGCD01049966;XM_005398770 XP_005398827 MODEL 39134436 misc_rna 7SK 7SK RNA 8903845 protein-coding Cfap418 cilia and flagella associated protein 418 INVOLVED IN photoreceptor cell morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome 21 (ortholog); cervical cancer (ortholog); FOUND IN ciliary base (ortholog); cytoplasm (ortholog); photoreceptor inner segment (ortholog) NW_004955417 11357367 11381287 - 102004385 AGCD01018130;AGCD01018131;GBCQ01125394;XM_005381829;XM_013512799;XM_013512800;XR_001233445;XR_001233446 XP_005381886;XP_013368253;XP_013368254 MODEL 8973560 protein-coding Atp13a2 ATPase cation transporting 13A2 ENCODES a protein that exhibits ABC-type polyamine transporter activity (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN autophagosome organization (ortholog); autophagosome-lysosome fusion (ortholog); autophagy (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); autistic disorder (ortholog); FOUND IN autophagosome (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955527 1805854 1823623 + 102025615 AGCD01069416;GBBH01034047;XM_005409823;XM_005409824 XP_005409880;XP_005409881 MODEL 8935425 protein-coding Trib3 tribbles pseudokinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955597 259209 265896 + 102020072 AGCD01076551;AGCD01076552;GBBH01224966;XM_005414716 XP_005414773 MODEL 9067501 protein-coding Epo erythropoietin ENCODES a protein that exhibits cytokine activity (ortholog); erythropoietin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN acute-phase response (ortholog); apoptotic process (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN erythropoietin signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Subdural Hematoma (ortholog); Acute-Phase Reaction (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955573 203875 206078 - 102013562 AGCD01074966;GBDF01164330;XM_005413690 XP_005413747 MODEL 9031508 protein-coding Dydc1 DPY30 domain containing 1 ASSOCIATED WITH melanoma (ortholog); FOUND IN radial spoke (ortholog) NW_004955510 319535 337268 - 102027211 AGCD01066145;GBDF01043580;XM_005407870 XP_005407927 MODEL 8975347 ncrna LOC102006516 uncharacterized LOC102006516 NW_004955450 641987 645584 + 102006516 AGCD01042340;GBCE01092145;XR_001235864;XR_262511 MODEL 8699771 protein-coding Hps4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein dimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood coagulation (ortholog); lysosome organization (ortholog); melanocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Albinism (ortholog); Breast Cancer, Familial (ortholog); FOUND IN BLOC-3 complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955455 1048946 1076097 - 102014319 AGCD01045568;GBDI01296596;XM_005396143;XM_013520383;XM_013520384;XM_013520385;XM_013520386;XM_013520387 XP_005396200;XP_013375837;XP_013375838;XP_013375839;XP_013375840;XP_013375841 MODEL 9052608 protein-coding Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN bone mineralization (ortholog); bone remodeling (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Anosmia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955476 6611102 6629294 - 102008406 AGCD01055337;GBBH01165625;GBCB01059985;XM_013502964 XP_013358418 MODEL 8988150 ncrna LOC102005440 uncharacterized LOC102005440 NW_004955405 37765968 37767069 + 102005440 AGCD01005459;GBDF01250670;XR_001236121 MODEL 39131399 protein-coding CDX2 caudal type homeobox 2 9038940 pseudo LOC102008374 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955452 16615403 16615951 + 102008374 AGCD01044520 MODEL 8878145 protein-coding LOC102017549 uncharacterized LOC102017549 NW_004955409 35685901 35755271 + 102017549 AGCD01010428;AGCD01010429;AGCD01010430;AGCD01010431;AGCD01010432;GBBH01115785;XM_013510221 XP_013365675 MODEL 39133999 misc_rna 7SK 7SK RNA 8857593 ncrna LOC102012665 uncharacterized LOC102012665 NW_004955425 2406340 2448278 - 102012665 AGCD01025262;AGCD01025263;GBDF01006731;XR_261120 MODEL 39133871 misc_rna 7SK 7SK RNA 39132232 rrna 5S_rRNA 5S ribosomal RNA 9021820 protein-coding Capn2 calpain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); calcium-dependent cysteine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN behavioral response to pain (ortholog); blastocyst development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Anthracycline-induced Cardiotoxicity (ortholog); FOUND IN calpain complex (ortholog); cell projection (ortholog); chromatin (ortholog) NW_004955520 1287829 1315318 - 102003055 AGCD01068050;GBCQ01012082;GBDK01013075;XM_013507063 XP_013362517 MODEL 9001158 protein-coding Akap17a A-kinase anchoring protein 17A ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955499 1119658 1130250 + 102025028 AGCD01063321;AGCD01063322;AGCD01063323;GBCB01043489;GBCB01043491;XM_013505618 XP_013361072 MODEL 9062469 protein-coding Cdadc1 cytidine and dCMP deaminase domain containing 1 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); dCTP deaminase activity (ortholog); importin-alpha family protein binding (ortholog); INVOLVED IN DNA cytosine deamination (ortholog); dUTP biosynthetic process (ortholog); protein homotrimerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955431 2724988 2767539 + 102020829 AGCD01029938;AGCD01029939;GBDK01156615;XM_005387576;XM_005387577;XM_005387578;XM_005387579;XM_005387580;XM_005387581;XM_013515745;XM_013515746 XP_005387633;XP_005387634;XP_005387635;XP_005387636;XP_005387637;XP_005387638;XP_013371199;XP_013371200 MODEL 126903048 protein-coding FBXL22 F-box and leucine rich repeat protein 22 8955807 protein-coding Ccdc14 coiled-coil domain containing 14 INVOLVED IN protein localization to centrosome (ortholog); substantia nigra development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) NW_004955427 23043001 23095201 - 102016295 AGCD01027479;AGCD01027480;GBDF01159186;XM_005386532;XM_013515232 XP_005386589;XP_013370686 MODEL 8729266 protein-coding Gpr37l1 G protein-coupled receptor 37 like 1 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); peptide binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to reactive oxygen species (ortholog); negative regulation of astrocyte differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955406 38214490 38223281 + 102022161 AGCD01006597;GBBH01193715;XM_005375203 XP_005375260 MODEL 8844479 protein-coding Dgat1 diacylglycerol O-acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); acyltransferase activity (ortholog); diacylglycerol binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); fatty acid homeostasis (ortholog); glycerolipid metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH cardiomyopathy (ortholog); cervical cancer (ortholog); chronic kidney disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955454 2933904 2944675 - 102029149 AGCD01045040;GBDK01293190;XM_005395868 XP_005395925 MODEL 8715614 protein-coding Ap3b1 adaptor related protein complex 3 subunit beta 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); GTP-dependent protein binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autoimmune hemolytic anemia (ortholog); autoimmune thrombocytopenic purpura (ortholog); FOUND IN microvesicle (ortholog) NW_004955425 22792616 23051509 + 102015649 AGCD01025833;AGCD01025834;AGCD01025835;AGCD01025836;AGCD01025837;AGCD01025838;GBDF01157461;XM_005386022 XP_005386079 MODEL 8963996 pseudo LOC102006864 protein phosphatase 1 regulatory subunit 21 pseudogene NW_004955405 13078719 13081046 + 102006864 AGCD01004872 MODEL 8834281 protein-coding LOC102003683 taste receptor type 2 member 7-like NW_004955432 18798901 18799800 + 102003683 AGCD01031161;XM_005388153 XP_005388210 MODEL 8961613 protein-coding Brcc3 BRCA1/BRCA2-containing complex subunit 3 ENCODES a protein that exhibits enzyme regulator activity (ortholog); K63-linked deubiquitinase activity (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); chromatin remodeling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955594 551407 613772 - 102024964 AGCD01076434;AGCD01076435;GBCB01038463;XM_013509990;XM_013509991 XP_013365444;XP_013365445 MODEL 8812605 protein-coding Adig adipogenin INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); lipid droplet formation (ortholog); ASSOCIATED WITH sarcoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955445 18134107 18138198 - 102005854 AGCD01039898;GBDF01176282;XM_005392586 XP_005392643 MODEL 8946633 ncrna LOC102021628 uncharacterized LOC102021628 NW_004955407 40113326 40117575 + 102021628 AGCD01007838;GBDF01144645;XR_259633 MODEL 8732351 protein-coding Id1 inhibitor of DNA binding 1, HLH protein ENCODES a protein that exhibits identical protein binding (ortholog); proteasome binding (ortholog); transcription factor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell-abiotic substrate adhesion (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholestasis (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955422 29337969 29339178 - 102019405 AGCD01023390;GBCE01002189;XM_005384905 XP_005384962 MODEL 9026268 protein-coding Elovl6 ELOVL fatty acid elongase 6 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fatty acid elongase complex (ortholog) NW_004955496 179634 301908 + 102022717 AGCD01062223;AGCD01062224;AGCD01062225;GBCQ01134913;XM_005406181;XM_005406182;XM_013505419 XP_005406238;XP_005406239;XP_013360873 MODEL 8947444 pseudo LOC102011024 cyclin-G1-like NW_004955505 3590543 3591876 + 102011024 AGCD01065032 MODEL 9042053 protein-coding Chrne cholinergic receptor nicotinic epsilon subunit ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN monoatomic cation transport (ortholog); regulation of membrane potential (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Breast Cancer, Familial (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 4 (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); postsynaptic membrane (ortholog) NW_004955467 10312620 10318700 - 102021111 AGCD01051558;GBCB01098117;XM_005399619;XM_005399621;XM_013522172 XP_005399676;XP_005399678;XP_013377626 MODEL 8705695 pseudo LOC102004023 guanine deaminase-like NW_004955402 41170178 41171764 - 102004023 AGCD01001012 MODEL 8703523 protein-coding Angel1 angel homolog 1 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein domain specific binding (ortholog); RNA 2',3'-cyclic phosphatase activity (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, non-stop decay (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955438 776213 805020 - 102004006 AGCD01034963;GBDF01001997;XM_005390162;XM_005390163;XM_005390164;XM_005390165;XM_005390166;XM_013517174 XP_005390219;XP_005390220;XP_005390221;XP_005390222;XP_005390223;XP_013372628 MODEL 8777629 protein-coding Clec3b C-type lectin domain family 3 member B ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); kringle domain binding (ortholog); INVOLVED IN bone mineralization (ortholog); ossification (ortholog); positive regulation of plasminogen activation (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); retinal macular dystrophy 4 (ortholog); Scheuermann's disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); granular component (ortholog) NW_004955420 26665472 26669474 - 102010167 AGCD01021426;AGCD01021427;GBCQ01000804;GBDF01161631;XM_013513371 XP_013368825 MODEL 39131993 rrna 5S_rRNA 5S ribosomal RNA 39134131 misc_rna 7SK 7SK RNA 8758561 protein-coding Actl7b actin like 7B FOUND IN cytoplasm (ortholog) NW_004955419 18106542 18107955 + 102022085 AGCD01020168;GBDF01010361;XM_005382761 XP_005382818 MODEL 8786200 protein-coding LOC102009121 zinc finger protein 345-like NW_004955569 1713912 1862497 + 102009121 AGCD01074678;AGCD01074679;AGCD01074680;AGCD01074681;AGCD01074682;AGCD01074683;AGCD01074684;AGCD01074685;AGCD01074686;AGCD01074687;AGCD01074688;AGCD01074689;AGCD01074690;AGCD01074691;AGCD01074692;XM_013509366 XP_013364820 MODEL 8701061 protein-coding LOC102011427 chromosome unknown open reading frame, human C19orf12 INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH Ataxia (ortholog); Cognitive Dysfunction (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955468 7903438 7914038 + 102011427 AGCD01052015;AGCD01052016;GBCB01022853;XM_005400110 XP_005400167 MODEL 8939279 protein-coding Gba1 glucosylceramidase beta 1 ENCODES a protein that exhibits beta-glucosidase activity (ortholog); glucosylceramidase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); autophagosome organization (ortholog); autophagy (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH brain disease (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955545 1682097 1689373 - 102029796 AGCD01071867;GBDJ01186339;XM_005411586 XP_005411643 MODEL 9061206 protein-coding Il17a interleukin 17A ENCODES a protein that exhibits cytokine activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); cellular response to interleukin-1 (ortholog); defense response to fungus (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acne (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955411 5896435 5899911 - 102029486 AGCD01011666;GBDF01098022;XM_005377658 XP_005377715 MODEL 8896317 protein-coding Efhc2 EF-hand domain containing 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); ciliary basal body (ortholog) NW_004955516 3867542 4036049 + 102005495 AGCD01067515;AGCD01067516;GBDF01195979;XM_005408997 XP_005409054 MODEL 8821764 ncrna LOC102004400 uncharacterized LOC102004400 NW_004955497 160123 162418 + 102004400 AGCD01062402;GBDF01039971;XR_264186 MODEL 8745085 protein-coding Kcna7 potassium voltage-gated channel subfamily A member 7 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955559 1641388 1645476 + 102020388 AGCD01073655;GBDI01262925;XM_005412981 XP_005413038 MODEL 8794548 protein-coding Itgb3bp integrin subunit beta 3 binding protein INVOLVED IN negative regulation of epithelial cell apoptotic process (ortholog); positive regulation of epithelial cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); endometriosis (ortholog); FOUND IN inner kinetochore (ortholog); kinetochore (ortholog); nucleoplasm (ortholog) NW_004955423 26510979 26568796 + 102004178 AGCD01024097;GBDF01084975;XM_005385326;XM_013514391;XM_013514392;XM_013514393;XM_013514394 XP_005385383;XP_013369845;XP_013369846;XP_013369847;XP_013369848 MODEL 8789496 protein-coding Cntd1 cyclin N-terminal domain containing 1 INVOLVED IN reciprocal meiotic recombination (ortholog); regulation of meiotic cell cycle (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955451 16608810 16617095 + 102024970 AGCD01043696;GBCQ01070763;XM_005394482;XM_005394483;XM_005394484;XM_005394485;XM_013519258 XP_005394539;XP_005394540;XP_005394541;XP_005394542;XP_013374712 MODEL 8815042 protein-coding LOC102010276 uncharacterized LOC102010276 NW_004955494 4605410 4658564 - 102010276 AGCD01061508;AGCD01061509;XM_013504923 XP_013360377 MODEL 8916007 ncrna LOC102009480 uncharacterized LOC102009480 NW_004955412 20745073 20752832 + 102009480 AGCD01013012;AGCD01013013;GBDF01262373;XR_001232926;XR_260006 MODEL 39134437 misc_rna 7SK 7SK RNA 8781934 pseudo LOC102006517 vegetative cell wall protein gp1-like NW_004955588 440381 447451 - 102006517 AGCD01076110 MODEL 8967388 ncrna LOC102008015 uncharacterized LOC102008015 NW_004955506 4275716 4276076 - 102008015 AGCD01065332;XR_264349 MODEL 126903041 protein-coding DYDC2 DPY30 domain containing 2 8976579 protein-coding Atp13a3 ATPase 13A3 ENCODES a protein that exhibits ABC-type putrescine transporter activity (ortholog); P-type transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); recycling endosome membrane (ortholog) NW_004955420 14295844 14375325 + 102027857 AGCD01020940;AGCD01020941;AGCD01020942;AGCD01020943;GBCB01040232;XM_013513495;XM_013513496;XM_013513497;XM_013513498;XM_013513499;XM_013513500;XM_013513501;XM_013513502;XR_001233745;XR_001233746 XP_013368949;XP_013368950;XP_013368951;XP_013368952;XP_013368953;XP_013368954;XP_013368955;XP_013368956 MODEL 8819018 protein-coding Dgat2 diacylglycerol O-acyltransferase 2 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); diacylglycerol O-acyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to oleic acid (ortholog); cholesterol homeostasis (ortholog); diacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955414 16059781 16089727 - 102022183 AGCD01015197;GBDF01054643;XM_005379877;XM_005379878 XP_005379934;XP_005379935 MODEL 8934381 protein-coding Gpr39 G protein-coupled receptor 39 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adult feeding behavior (ortholog); cellular response to zinc ion (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN inhibitory synapse (ortholog); plasma membrane (ortholog) NW_004955440 46648 235644 + 102028580 AGCD01036156;AGCD01036157;AGCD01036158;AGCD01036159;GBDJ01115961;XM_005390734;XM_005390735 XP_005390791;XP_005390792 MODEL 8753696 protein-coding Abhd10 abhydrolase domain containing 10, depalmitoylase ENCODES a protein that exhibits hydrolase activity, hydrolyzing O-glycosyl compounds (ortholog); mycophenolic acid acyl-glucuronide esterase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN protein depalmitoylation (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955427 12388945 12403703 + 102023721 AGCD01027212;AGCD01027213;GBDK01016264;XM_005386378;XM_013515213 XP_005386435;XP_013370667 MODEL 8861847 protein-coding C8b complement C8 beta chain ENCODES a protein that exhibits protein-containing complex binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955464 2754655 2796423 + 102022897 AGCD01049965;GBDJ01208068;XM_013521573 XP_013377027 MODEL 8913815 ncrna LOC102003684 uncharacterized LOC102003684 NW_004955520 82188 91113 - 102003684 AGCD01068004;GBDI01367358;XR_264580 MODEL 10359006 ncrna LOC106149903 uncharacterized LOC106149903 NW_004955456 5894387 5943914 + 106149903 AGCD01046357;AGCD01046358;GBDJ01298811;XR_001236371;XR_001236372 MODEL 8980676 protein-coding Ccn6 cellular communication network factor 6 INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH arthropathy (ortholog); breast metaplastic carcinoma (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); mitochondrion (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955526 4501331 4525866 - 102006705 AGCD01069368;GBDJ01313420;XM_013507358 XP_013362812 MODEL 8790683 protein-coding Cdx2 caudal type homeobox 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blastocyst development (ortholog); blood vessel development (ortholog); ASSOCIATED WITH Adenomatous Polyps (ortholog); Anorectal Malformations (ortholog); Barrett's esophagus (ortholog); FOUND IN condensed nuclear chromosome (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955497 7316372 7321627 - 102016723 AGCD01062666;AGCD01062667;XM_005406380 XP_005406437 MODEL 8777715 protein-coding Cfap43 cilia and flagella associated protein 43 INVOLVED IN brain development (ortholog); cell morphogenesis (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog) NW_004955485 6418063 6515730 + 102013833 AGCD01058619;AGCD01058620;AGCD01058621;GBBH01035016;GBDF01049424;XM_013504069 XP_013359523 MODEL 9010093 protein-coding Adipoq adiponectin, C1Q and collagen domain containing ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); brown fat cell differentiation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); amyloidosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955420 20911181 20922992 - 102027858 AGCD01021111;GBCB01001605;XM_005383261;XM_005383262 XP_005383318;XP_005383319 MODEL 39134000 misc_rna 7SK 7SK RNA 8802129 pseudo LOC102012667 translationally-controlled tumor protein pseudogene NW_004955502 3634252 3634801 + 102012667 AGCD01064317 MODEL 8975756 protein-coding Cdan1 codanin 1 INVOLVED IN cell maturation (ortholog); cell morphogenesis (ortholog); chromatin organization (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endomembrane system (ortholog) NW_004955416 9393170 9403374 - 102024796 AGCD01017086;GBBH01143926;GBCE01116782;XM_013512437;XM_013512438;XM_013512439;XM_013512440;XM_013512441 XP_013367891;XP_013367892;XP_013367893;XP_013367894;XP_013367895 MODEL 8748469 protein-coding Ccdc141 coiled-coil domain containing 141 INVOLVED IN brain development (ortholog); centrosome localization (ortholog); cerebral cortex radially oriented cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955403 17850119 18032722 + 102024633 AGCD01002088;AGCD01002089;AGCD01002090;AGCD01002091;AGCD01002092;AGCD01002093;GBDJ01246173;XM_013512594 XP_013368048 MODEL 8797517 protein-coding Ap3b2 adaptor related protein complex 3 subunit beta 2 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 48 (ortholog); genetic disease (ortholog); FOUND IN neuron projection (ortholog); presynapse (ortholog) NW_004955416 13927655 13956589 + 102006659 AGCD01017240;GBDF01019358;XM_005381476;XM_005381477 XP_005381533;XP_005381534 MODEL 9016750 protein-coding Angel2 angel homolog 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA 2',3'-cyclic phosphatase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); mitochondrial mRNA 3'-end processing (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) NW_004955406 4589849 4606380 + 102015920 AGCD01005697;AGCD01005698;AGCD01005699;GBDF01055236;XM_005374730;XM_005374732;XM_005374733;XM_013520014;XM_013520031 XP_005374787;XP_005374789;XP_005374790;XP_013375468;XP_013375485 MODEL 8970278 protein-coding Tril TLR4 interactor with leucine rich repeats ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN regulation of cytokine production involved in immune response (ortholog); toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN lipopolysaccharide receptor complex (ortholog) NW_004955410 30497953 30503444 - 102015485 AGCD01011308;GBDK01079499;XM_005377483 XP_005377540 MODEL 9027412 ncrna LOC102017553 uncharacterized LOC102017553 NW_004955411 11887043 11891142 - 102017553 AGCD01011833;GBDF01079416;XR_259932 MODEL 9005705 protein-coding Lgr5 leucine rich repeat containing G protein-coupled receptor 5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN epithelial cell proliferation involved in renal tubule morphogenesis (ortholog); hair follicle development (ortholog); inner ear development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH ankyloglossia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog); trans-Golgi network membrane (ortholog) NW_004955405 11507083 11574504 + 102018887 AGCD01004834;AGCD01004835;GBBH01016179;XM_005374681 XP_005374738 MODEL 8823480 protein-coding Hps5 HPS5 biogenesis of lysosomal organelles complex 2 subunit 2 INVOLVED IN blood coagulation (ortholog); pigmentation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN BLOC-2 complex (ortholog); cytosol (ortholog) NW_004955414 32992669 33028620 - 102018822 AGCD01015794;AGCD01015795;GBDJ01237183;XM_005380409;XM_005380410;XM_005380411;XM_005380412;XM_013511905 XP_005380466;XP_005380467;XP_005380468;XP_005380469;XP_013367359 MODEL 8816454 ncrna LOC102006867 uncharacterized LOC102006867 NW_004955452 14398434 14403748 + 102006867 AGCD01044466;GBDF01039609;XR_001236058;XR_262689 MODEL 8954256 protein-coding LOC102005442 endothelin-converting enzyme-like 1 NW_004955453 3475528 3480680 + 102005442 AGCD01044660;GBDJ01085718;GBDK01397222;XM_013520001 XP_013375455 MODEL 8717521 protein-coding Capn3 calpain 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); catalytic activity (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); cellular response to calcium ion (ortholog); cellular response to salt stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Autosomal Dominant Limb-Girdle Muscular Dystrophy Type 4 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); myofibril (ortholog) NW_004955416 9070479 9121099 + 102021120 AGCD01017075;AGCD01017076;AGCD01017077;GBCB01004371;XM_005381335;XM_005381338;XM_005381339;XM_005381340;XM_005381342;XM_013512462;XM_013512463;XM_013512464;XM_013512466 XP_005381392;XP_005381395;XP_005381396;XP_005381397;XP_005381399;XP_013367916;XP_013367917;XP_013367918;XP_013367920 MODEL 8939448 ncrna LOC102008377 uncharacterized LOC102008377 NW_004955406 39188080 39231357 + 102008377 AGCD01006621;AGCD01006622;AGCD01006623;GBBH01127399;XR_001236960;XR_001236961;XR_001236965;XR_259524 MODEL 8774683 ncrna LOC102021630 uncharacterized LOC102021630 NW_004955456 15990135 16004134 + 102021630 AGCD01046681;GBDF01030945;XR_001236355 MODEL 8715715 protein-coding Fbxl3 F-box and leucine rich repeat protein 3 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN entrainment of circadian clock by photoperiod (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein destabilization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH SHORT STATURE, FACIAL ANOMALIES, AND SPEECH DEFECTS (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955404 30215140 30229798 + 102019461 AGCD01004001;GBCE01095386;GBDK01093958;XM_005374164 XP_005374221 MODEL 39133872 misc_rna 7SK 7SK RNA 39132233 rrna 5S_rRNA 5S ribosomal RNA 8721335 protein-coding Actl8 actin like 8 INVOLVED IN epithelial cell differentiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); stomach cancer (ortholog) NW_004955527 1217950 1274453 - 102020702 AGCD01069392;AGCD01069393;AGCD01069394;AGCD01069395;AGCD01069396;GBDF01193552;XM_005409807;XM_005409808 XP_005409864;XP_005409865 MODEL 8832307 pseudo LOC102011028 40S ribosomal protein S8 pseudogene NW_004955510 5851568 5852288 - 102011028 AGCD01066294 MODEL 8865576 protein-coding Gba2 glucosylceramidase beta 2 ENCODES a protein that exhibits beta-glucosidase activity (ortholog); glucosylceramidase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN bile acid metabolic process (ortholog); central nervous system neuron development (ortholog); cholesterol metabolic process (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955472 553556 564411 + 102009042 AGCD01053340;AGCD01053341;GBDI01186476;XM_005401007 XP_005401064 MODEL 8821855 protein-coding LOC102010279 guanylate-binding protein 6-like NW_004955423 4800576 4831760 + 102010279 AGCD01023545;AGCD01023546;GBDI01220537;XM_005385092;XM_005385093 XP_005385149;XP_005385150 MODEL 8711858 pseudo LOC102004024 KATNB1-like protein 1 NW_004955402 52891404 52893054 - 102004024 AGCD01001350 MODEL 8776368 protein-coding Chrng cholinergic receptor nicotinic gamma subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); regulation of membrane potential (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); bone development disease (ortholog); cholangiocarcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) NW_004955453 3425603 3432695 - 102014863 AGCD01044658;GBDF01100651;XM_005395371;XM_005395372;XM_005395376 XP_005395428;XP_005395429;XP_005395433 MODEL 9001999 protein-coding Epor erythropoietin receptor ENCODES a protein that exhibits erythropoietin receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to kainic acid (ortholog); decidualization (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); Brain Hypoxia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955495 2293587 2299302 - 102022714 AGCD01061763;GBCQ01062324;XM_005405664 XP_005405721 MODEL 8825977 protein-coding Clec4d C-type lectin domain family 4 member D ENCODES a protein that exhibits D-mannose binding (ortholog); immunoglobulin receptor binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 5267548 5276969 - 102016364 AGCD01013660;AGCD01013661;GBDK01281118;XM_005378869 XP_005378926 MODEL 39134132 misc_rna 7SK 7SK RNA 8978721 protein-coding Brd1 bromodomain containing 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of erythrocyte differentiation (ortholog); response to electrical stimulus (ortholog); response to immobilization stress (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); bipolar disorder (ortholog); FOUND IN chromosome (ortholog); dendrite (ortholog); histone H3-K14 acetyltransferase complex (ortholog) NW_004955413 32935827 32973820 - 102016580 AGCD01014652;GBDK01189055;XM_005379525;XM_005379526;XM_013511532 XP_005379582;XP_005379583;XP_013366986 MODEL 8868948 protein-coding Gpr4 G protein-coupled receptor 4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); angiogenesis involved in wound healing (ortholog); cellular response to acidic pH (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955574 85619 87928 - 102014400 AGCD01075084;GBDK01306170;XM_005413788 XP_005413845 MODEL 8855148 protein-coding Elovl7 ELOVL fatty acid elongase 7 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); very long-chain fatty acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955446 7732291 7758842 + 102005647 AGCD01040128;AGCD01040129;GBDF01215158;XM_013518450;XM_013518451 XP_013373904;XP_013373905 MODEL 8919194 protein-coding Abhd11 abhydrolase domain containing 11 ENCODES a protein that exhibits lipase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) NW_004955456 14019073 14021536 + 102023004 AGCD01046631;GBDK01009837;XM_005396765 XP_005396822 MODEL 8987364 protein-coding Gbe1 1,4-alpha-glucan branching enzyme 1 ENCODES a protein that exhibits 1,4-alpha-glucan branching enzyme activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); negative regulation of neuron apoptotic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen biosynthetic pathway; glycogen storage disease type III pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); asthma (ortholog); FOUND IN cytosol (ortholog) NW_004955407 10692082 10959236 + 102028159 AGCD01007085;AGCD01007086;AGCD01007087;AGCD01007088;AGCD01007089;AGCD01007090;AGCD01007091;AGCD01007092;GBDI01173668;XM_005375541 XP_005375598 MODEL 8845998 protein-coding Il17b interleukin 17B ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Keratoconus 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955415 5037270 5047405 + 102024451 AGCD01015989;GBBH01011723;XM_005380607;XM_005380608;XM_005380609;XM_005380610;XM_005380611;XM_013512106;XM_013512107 XP_005380664;XP_005380665;XP_005380666;XP_005380667;XP_005380668;XP_013367560;XP_013367561 MODEL 8989040 protein-coding Efhd1 EF-hand domain family member D1 ENCODES a protein that exhibits calcium ion sensor activity (ortholog); INVOLVED IN neuron projection development (ortholog); regulation of cellular hyperosmotic salinity response (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog); mitochondrial inner membrane (ortholog) NW_004955453 3344919 3378157 - 102004779 AGCD01044657;GBCQ01011819;XM_013519767;XM_013519768 XP_013375221;XP_013375222 MODEL 8711525 protein-coding Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); carbonyl reductase (NADPH) activity (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN diaphragm development (ortholog); heart development (ortholog); learning or memory (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hypertension (ortholog); Hypoxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955448 7145471 7553090 + 102018545 AGCD01041401;AGCD01041402;AGCD01041403;AGCD01041404;AGCD01041405;AGCD01041406;AGCD01041407;AGCD01041408;AGCD01041409;AGCD01041410;AGCD01041411;AGCD01041412;AGCD01041413;AGCD01041414;GBDI01387048;XM_005393077;XM_005393078 XP_005393134;XP_005393135 MODEL 9031139 protein-coding C9 complement C9 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN cell killing (ortholog); complement activation (ortholog); complement activation, GZMK pathway (ortholog); ASSOCIATED WITH age related macular degeneration 15 (ortholog); autosomal dominant polycystic kidney disease (ortholog); complement component 9 deficiency (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955426 23790792 23824117 - 102010603 AGCD01026656;AGCD01026657;AGCD01026658;XM_013514935 XP_013370389 MODEL 8962485 protein-coding Cntf ciliary neurotrophic factor ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN astrocyte activation (ortholog); axon regeneration (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog); glial cell projection (ortholog) NW_004955511 3527552 3531275 + 102004189 AGCD01066466;GBCB01130411;XM_005408041 XP_005408098 MODEL 8946993 pseudo LOC102012669 protein slowmo homolog 2-like NW_004955503 6860185 6860772 + 102012669 AGCD01064772 MODEL 8727037 protein-coding Ccdc142 coiled-coil domain containing 142 ASSOCIATED WITH dystonia (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog) NW_004955424 11304968 11312679 + 102025263 AGCD01024561;GBDK01233807;XM_005385496 XP_005385553 MODEL 155598685 protein-coding AKAP17A A-kinase anchoring protein 17A 39131994 rrna 5S_rRNA 5S ribosomal RNA 9010277 protein-coding Atp13a4 ATPase 13A4 INVOLVED IN intracellular calcium ion homeostasis (ortholog); polyamine transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); late endosome membrane (ortholog) NW_004955420 15032370 15179190 + 102008320 AGCD01020962;AGCD01020963;AGCD01020964;AGCD01020965;AGCD01020966;GBDK01071090;XM_005383209 XP_005383266 MODEL 8725832 protein-coding Dydc2 DPY30 domain containing 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955510 337286 348640 + 102026895 AGCD01066145;GBDF01053016;XM_013506330 XP_013361784 MODEL 8841048 protein-coding Dgat2l6 diacylglycerol O-acyltransferase 2 like 6 ENCODES a protein that exhibits diacylglycerol O-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955475 9708402 9733712 + 102020004 AGCD01055069;AGCD01055070;AGCD01055071;GBDJ01212951;XM_005401609 XP_005401666 MODEL 8872093 protein-coding Id2 inhibitor of DNA binding 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adult locomotory behavior (ortholog); bundle of His development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955487 878326 880783 - 102009189 AGCD01059234;GBDJ01312094;XM_005404347;XM_005404348 XP_005404404;XP_005404405 MODEL 9003733 pseudo LOC102003685 39S ribosomal protein L22, mitochondrial pseudogene NW_004955520 2732442 2737379 + 102003685 AGCD01068082 MODEL 9042911 ncrna LOC102004403 uncharacterized LOC102004403 NW_004955427 13583687 13585755 + 102004403 AGCD01027253;GBDF01082612;XR_001234372 MODEL 8872567 protein-coding Ccna1 cyclin A1 PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cyclin A1-CDK2 complex (ortholog); microtubule cytoskeleton (ortholog) NW_004955431 9658301 9668659 - 102028450 AGCD01030190;AGCD01030191;GBDF01010345;XM_005387680 XP_005387737 MODEL 8737534 pseudo LOC102009482 growth hormone-inducible transmembrane protein pseudogene NW_004955466 13355054 13356148 - 102009482 AGCD01051156 MODEL 8738905 protein-coding LOC102009123 transmembrane protease serine 11E NW_004955447 4505454 4611439 + 102009123 AGCD01040721;AGCD01040722;AGCD01040723;AGCD01040724;AGCD01040725;GBDF01013955;XM_005392824;XM_005392826;XM_013518541 XP_005392881;XP_005392883;XP_013373995 MODEL 8748923 protein-coding Itgb4 integrin subunit beta 4 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); insulin-like growth factor I binding (ortholog); neuregulin binding (ortholog); INVOLVED IN autophagy (ortholog); cell adhesion (ortholog); cell motility (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN basal plasma membrane (ortholog); basement membrane (ortholog); cell cortex (ortholog) NW_004955506 6493466 6526778 - 102013633 AGCD01065428;AGCD01065429;GBCE01029062;GBDJ01006555;XM_005407483;XM_005407484;XM_005407485;XM_005407486 XP_005407540;XP_005407541;XP_005407542;XP_005407543 MODEL 8970058 protein-coding LOC102008379 zinc finger protein 454 NW_004955408 1440967 1461815 - 102008379 AGCD01007959;GBBH01113383;XM_013507982;XM_013507985 XP_013363436;XP_013363439 MODEL 8778548 protein-coding Cfap44 cilia and flagella associated protein 44 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH spermatogenic failure 20 (ortholog) NW_004955427 13497275 13583605 - 102020689 AGCD01027252;AGCD01027253;GBDI01139893;XM_013515054 XP_013370508 MODEL 39133873 misc_rna 7SK 7SK RNA 9046460 protein-coding Adipor1 adiponectin receptor 1 ENCODES a protein that exhibits adipokinetic hormone receptor activity (ortholog); adiponectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid oxidation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 38939167 38955647 - 102003834 AGCD01006613;AGCD01006614;GBBH01088732;GBCB01021805;XM_013522468 XP_013377922 MODEL 39132235 rrna 5S_rRNA 5S ribosomal RNA 8857530 pseudo LOC102006520 pinin-like NW_004955402 55201413 55203705 - 102006520 AGCD01001428 MODEL 8743066 protein-coding Ap3d1 adaptor related protein complex 3 subunit delta 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH Albinism (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); endosome membrane (ortholog); glutamatergic synapse (ortholog) NW_004955495 5972177 6012525 + 102018301 AGCD01062045;AGCD01062046;GBDF01051444;XM_005405920;XM_005405921 XP_005405977;XP_005405978 MODEL 8885008 protein-coding Chst1 carbohydrate sulfotransferase 1 ENCODES a protein that exhibits keratan sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN galactose metabolic process (ortholog); keratan sulfate proteoglycan biosynthetic process (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955422 2269791 2274714 + 102020454 AGCD01022483;GBCE01155996;XM_005384071 XP_005384128 MODEL 8967454 ncrna LOC102011431 uncharacterized LOC102011431 NW_004955414 6656760 6678985 + 102011431 AGCD01014926;GBBH01097014;XR_001233094;XR_001233095;XR_001233097;XR_260157 MODEL 8752508 protein-coding Eppk1 epiplakin 1 ENCODES a protein that exhibits intermediate filament binding (ortholog); keratin filament binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); intermediate filament bundle assembly (ortholog); intermediate filament organization (ortholog); ASSOCIATED WITH Chloracne (ortholog); myoepithelioma (ortholog); FOUND IN anchoring junction (ortholog); apicolateral plasma membrane (ortholog); basal part of cell (ortholog) NW_004955454 2512151 2526080 - 102015600 AGCD01045022;GBCE01166943;XM_005395819 XP_005395876 MODEL 8757524 protein-coding Hps6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); GTP-dependent protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN blood coagulation (ortholog); lipid homeostasis (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH Albinism (ortholog); genetic disease (ortholog); hemorrhagic disease (ortholog); FOUND IN BLOC-2 complex (ortholog); cytosol (ortholog); early endosome membrane (ortholog) NW_004955485 8270997 8273060 - 102016387 AGCD01058705;GBBH01193774;GBCB01130027;XM_013504129 XP_013359583 MODEL 39134438 misc_rna 7SK 7SK RNA 8796312 protein-coding LOC102017554 stromelysin-1 NW_004955412 6019457 6027604 - 102017554 AGCD01012664;GBDJ01341055;XM_005377987 XP_005378044 MODEL 8931103 protein-coding Cdyl chromodomain Y like ENCODES a protein that exhibits (2E)-butenoyl-CoA hydratase activity (ortholog); chromatin binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of peptidyl-lysine crotonylation (ortholog); random inactivation of X chromosome (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955465 8570197 8780551 - 102009811 AGCD01050476;AGCD01050477;AGCD01050478;AGCD01050479;GBBH01050758;XM_005398883;XM_013521859;XM_013521860 XP_005398940;XP_013377313;XP_013377314 MODEL 8789331 protein-coding Efhd2 EF-hand domain family member D2 ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); calcium ion sensor activity (ortholog); INVOLVED IN actin crosslink formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Binge Drinking (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN lamellipodium (ortholog) NW_004955527 2724607 2739324 - 102013754 AGCD01069464;GBBH01060768;XM_005409875 XP_005409932 MODEL 8940998 protein-coding Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN cell activation involved in immune response (ortholog); COPI coating of Golgi vesicle (ortholog); Golgi to endosome transport (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cataract 11 multiple types (ortholog); FOUND IN cell leading edge (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955485 8006161 8126074 - 102018732 AGCD01058688;AGCD01058689;AGCD01058690;GBCB01020289;XM_005403846;XM_005403847;XM_005403848;XM_005403849;XM_005403850;XM_005403851 XP_005403903;XP_005403904;XP_005403905;XP_005403906;XP_005403907;XP_005403908 MODEL 9011577 protein-coding Akap19 A-kinase anchoring protein 19 ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 8797416 8847431 - 102003714 AGCD01001889;AGCD01001890;AGCD01001891;AGCD01001892;AGCD01001893;AGCD01001894;AGCD01001895;GBDF01008336;XM_005373308;XM_005373309;XM_005373311 XP_005373365;XP_005373366;XP_005373368 MODEL 9010386 protein-coding Capn5 calpain 5 INVOLVED IN granulosa cell differentiation (ortholog); luteinization (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN cell surface (ortholog); synapse (ortholog) NW_004955414 14652578 14706833 - 102011859 AGCD01015155;GBCE01186015;XM_005379843;XM_005379844;XM_005379845 XP_005379900;XP_005379901;XP_005379902 MODEL 8997905 protein-coding Cdc123 cell division cycle 123 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN eukaryotic translation initiation factor 2 complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955462 212090 270168 + 102006103 AGCD01049072;AGCD01049073;AGCD01049074;AGCD01049075;GBDF01085876;XM_005398078;XM_005398079 XP_005398135;XP_005398136 MODEL 9060807 pseudo LOC102012670 coiled-coil domain-containing protein 112 pseudogene NW_004955427 341416 343438 - 102012670 AGCD01026827;AGCD01026828 MODEL 8938738 protein-coding LOC102008016 scavenger receptor cysteine-rich type 1 protein M130-like NW_004955507 6508836 6526813 - 102008016 AGCD01065720;AGCD01065721;AGCD01065722;GBDI01367183;XM_013506149 XP_013361603 MODEL 8795536 protein-coding LOC102011029 chromosome unknown open reading frame, human C10orf67 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955429 5674076 5798289 + 102011029 AGCD01028531;AGCD01028532;AGCD01028533;AGCD01028534;AGCD01028535;AGCD01028536;GBDF01127753;XM_013515364 XP_013370818 MODEL 9050136 protein-coding Angpt1 angiopoietin 1 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN activation of transmembrane receptor protein tyrosine kinase activity (ortholog); angiogenesis (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN angiopoietin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); brain ischemia (ortholog); FOUND IN extracellular region (ortholog); membrane raft (ortholog); microvillus (ortholog) NW_004955417 30199508 30386695 - 102028535 AGCD01018618;AGCD01018619;AGCD01018620;GBCB01098477;GBDJ01356193;XM_005381965 XP_005382022 MODEL 8788450 protein-coding Trim10 tripartite motif containing 10 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); erythrocyte differentiation (ortholog); host-mediated suppression of symbiont invasion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); irritant dermatitis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955583 268856 277079 - 102012818 AGCD01075808;GBBH01166081;XM_005414300 XP_005414357 MODEL 8885428 protein-coding Lgr6 leucine rich repeat containing G protein-coupled receptor 6 INVOLVED IN bone regeneration (ortholog); cell population proliferation (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN vesicle (ortholog) NW_004955406 38274998 38381677 + 102005893 AGCD01006599;AGCD01006600;GBBH01110778;GBBH01131676;XM_013522356 XP_013377810 MODEL 8717379 protein-coding Clec4e C-type lectin domain family 4 member E ENCODES a protein that exhibits calcium ion binding (ortholog); glycolipid binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN antifungal innate immune response (ortholog); defense response to bacterium (ortholog); Fc-gamma receptor signaling pathway (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); lung disease (ortholog); melanoma (ortholog); FOUND IN membrane (ortholog); phagocytic vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955413 5256523 5261385 + 102015706 AGCD01013659;GBDF01076579;XM_005378867;XM_005378868;XR_001233008 XP_005378924;XP_005378925 MODEL 39134133 misc_rna 7SK 7SK RNA 8993271 protein-coding LOC102006869 zinc finger protein 14-like NW_004955453 6825362 6828549 + 102006869 AGCD01044731;XM_005395440 XP_005395497 MODEL 8774380 protein-coding LOC102005443 keratin-associated protein 20-1-like NW_004955407 30075930 30076100 + 102005443 AGCD01007625;XM_005375636 XP_005375693 MODEL 8998336 protein-coding Gpr45 G protein-coupled receptor 45 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); protein carrier activity (ortholog); INVOLVED IN negative regulation of appetite (ortholog); protein localization to non-motile cilium (ortholog); FOUND IN ciliary membrane (ortholog) NW_004955470 10166164 10169031 + 102026099 AGCD01052857;GBCQ01030771;XM_005400779 XP_005400836 MODEL 10310687 ncrna LOC106149904 uncharacterized LOC106149904 NW_004955456 13978348 13997437 + 106149904 AGCD01046629;AGCD01046630;GBDJ01210651;XR_001236373;XR_001236374 MODEL 8961738 protein-coding Brd10 bromodomain containing 10 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955434 9904255 9991651 - 102005499 AGCD01032314;AGCD01032315;AGCD01032316;GBCQ01124872;GBDJ01028811;XM_013516351 XP_013371805 MODEL 8708720 pseudo LOC102021634 granzyme B(G,H)-like NW_004955409 35533853 35535909 + 102021634 AGCD01010425 MODEL 9032631 protein-coding Fbxl4 F-box and leucine rich repeat protein 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); negative regulation of mitophagy (ortholog); ASSOCIATED WITH brain disease (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955411 24757445 24814642 - 102022175 AGCD01012138;GBCB01042587;XM_005377798 XP_005377855 MODEL 8757612 protein-coding Kcnab2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); methylglyoxal reductase (NADPH) (acetol producing) activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); myoblast differentiation (ortholog); neuromuscular process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chromosome 1p36 deletion syndrome (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) NW_004955486 6371212 6442888 - 102018403 AGCD01059119;GBDF01153905;XM_005404118;XM_005404119;XM_005404121;XM_005404122;XM_013504274;XM_013504275;XM_013504276;XM_013504277;XM_013504278 XP_005404175;XP_005404176;XP_005404178;XP_005404179;XP_013359728;XP_013359729;XP_013359730;XP_013359731;XP_013359732 MODEL 8742537 protein-coding Il17c interleukin 17C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN neutrophil differentiation (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); FOUND IN extracellular region (ortholog) NW_004955541 2568941 2570440 + 102025843 AGCD01071416;XM_013507999 XP_013363453 MODEL 9048358 protein-coding LOC102003687 vomeronasal type-2 receptor 116-like NW_004955524 1903056 1933183 + 102003687 AGCD01068783;AGCD01068784;AGCD01068785;AGCD01068786;AGCD01068787;GBDF01097477;XM_013507191 XP_013362645 MODEL 8802225 protein-coding Ccna2 cyclin A2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell cycle G1/S phase transition (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN G1/S transition pathway; p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Carotid Artery Injuries (ortholog); cervical cancer (ortholog); FOUND IN cyclin A2-CDK1 complex (ortholog); cyclin A2-CDK2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955428 18725969 18732478 + 102018419 AGCD01028069;GBDF01006345;XM_005386783 XP_005386840 MODEL 8988348 protein-coding Abhd12 abhydrolase domain containing 12, lysophospholipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); adult walking behavior (ortholog); glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); cone dystrophy (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cytoplasm (ortholog); dendrite cytoplasm (ortholog) NW_004955415 31284947 31337703 - 102011199 AGCD01016672;AGCD01016673;AGCD01016674;GBDF01082244;GBDK01081859;XM_013512239 XP_013367693 MODEL 9004477 protein-coding Actmap actin maturation protease ENCODES a protein that exhibits cysteine-type aminopeptidase activity (ortholog); initiator methionyl aminopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955578 590202 596846 + 102006966 AGCD01075489;GBDI01000116;XM_005414025;XR_001232466;XR_265085;XR_265086 XP_005414082 MODEL 39131995 rrna 5S_rRNA 5S ribosomal RNA 8859173 protein-coding Atp13a5 ATPase 13A5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); lung cancer (ortholog) NW_004955420 15200164 15303906 + 102008000 AGCD01020968;GBDJ01180966;XM_005383208 XP_005383265 MODEL 8868237 protein-coding Cntfr ciliary neurotrophic factor receptor ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); cytokine activity (ortholog); cytokine binding (ortholog); INVOLVED IN brainstem development (ortholog); ciliary neurotrophic factor-mediated signaling pathway (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); ciliary neurotrophic factor receptor complex (ortholog); CNTFR-CLCF1 complex (ortholog) NW_004955472 1540973 1577734 + 102023901 AGCD01053400;AGCD01053401;GBCB01022124;GBCE01052595;XM_005401058 XP_005401115 MODEL 8736802 protein-coding Dym dymeclin ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN bone development (ortholog); Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955402 34150783 34541944 - 102011262 AGCD01000852;AGCD01000853;AGCD01000854;AGCD01000855;AGCD01000856;AGCD01000857;AGCD01000858;AGCD01000859;AGCD01000860;AGCD01000861;AGCD01000862;GBDK01133357;XM_005372905;XM_005372906 XP_005372962;XP_005372963 MODEL 8909842 protein-coding Itgb5 integrin subunit beta 5 ENCODES a protein that exhibits integrin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); endodermal cell differentiation (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Familial Prostate Cancer (ortholog); lung cancer (ortholog); FOUND IN cell leading edge (ortholog); cell surface (ortholog); focal adhesion (ortholog) NW_004955427 23851475 23952211 - 102020591 AGCD01027493;AGCD01027494;AGCD01027495;GBBH01034040;XM_013515122 XP_013370576 MODEL 8865858 protein-coding Id3 inhibitor of DNA binding 3, HLH protein ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); leptomycin B binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to leptomycin B (ortholog); central nervous system development (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Burkitt lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 3537352 3538921 - 102016972 AGCD01043929;GBDK01016702;XM_005394768 XP_005394825 MODEL 8824521 pseudo LOC102004025 ADP-ribosylation factor-like protein 4A NW_004955402 1033825 1036943 + 102004025 AGCD01000045 MODEL 8842401 ncrna LOC102009483 uncharacterized LOC102009483 NW_004955412 27560591 27578228 + 102009483 AGCD01013240;AGCD01013241;GBDK01345407;XR_260029 MODEL 8760889 protein-coding Adipor2 adiponectin receptor 2 ENCODES a protein that exhibits adipokinetic hormone receptor activity (ortholog); adiponectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to fatty acid (ortholog); female pregnancy (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-associated liver disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955454 4243898 4327255 + 102025869 AGCD01045119;AGCD01045120;AGCD01045121;GBBH01142646;XM_005395954 XP_005396011 MODEL 9036915 pseudo LOC102010280 tubulin-folding cofactor B pseudogene NW_004955495 5024249 5025001 + 102010280 AGCD01061970 MODEL 39133302 misc_rna 7SK 7SK RNA 39132237 rrna 5S_rRNA 5S ribosomal RNA 8897035 protein-coding Capn6 calpain 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); regulation of cytoskeleton organization (ortholog); ASSOCIATED WITH essential tremor (ortholog); hypertension (ortholog); lung cancer (ortholog); FOUND IN microtubule (ortholog); perinuclear region of cytoplasm (ortholog); spindle microtubule (ortholog) NW_004955490 4499888 4526060 + 102005385 AGCD01060188;GBDF01112329;XM_005404646 XP_005404703 MODEL 8935659 pseudo LOC102006522 60S ribosomal protein L27a pseudogene NW_004955402 43985649 43988282 - 102006522 AGCD01001085;XM_005373176 MODEL 8813441 ncrna LOC102008387 uncharacterized LOC102008387 NW_004955410 24882847 24896816 + 102008387 AGCD01011136;GBDK01431851;XR_001232709 MODEL 8812077 protein-coding Chst10 carbohydrate sulfotransferase 10 ENCODES a protein that exhibits HNK-1 sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); learning (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955470 6448167 6468386 - 102014550 AGCD01052771;GBBH01207463;XM_005400754;XM_013522834 XP_005400811;XP_013378288 MODEL 9044438 protein-coding Ccdc146 coiled-coil domain containing 146 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell population proliferation (ortholog); cilium organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955410 7810702 7925844 - 102012513 AGCD01010723;AGCD01010724;AGCD01010725;AGCD01010726;GBDI01290438;XM_013510513 XP_013365967 MODEL 8939475 pseudo LOC102011433 zinc finger protein 35-like NW_004955414 19831492 19837666 - 102011433 AGCD01015339 MODEL 8711089 protein-coding Angpt2 angiopoietin 2 ENCODES a protein that exhibits receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ regeneration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); adenocarcinoma (ortholog); alcohol-associated liver disease (ortholog); FOUND IN cell projection (ortholog); extracellular region (ortholog) NW_004955403 54139823 54193740 + 102009568 AGCD01003089;GBCQ01175373;XM_005373846 XP_005373903 MODEL 8981707 protein-coding Dgcr2 DiGeorge syndrome critical region gene 2 INVOLVED IN cognition (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN membrane (ortholog) NW_004955442 18857222 18938552 + 102013222 AGCD01038022;AGCD01038023;AGCD01038024;GBDF01052698;XM_005391789;XM_005391790;XM_005391791;XM_005391792 XP_005391846;XP_005391847;XP_005391848;XP_005391849 MODEL 8837354 protein-coding Hpse heparanase ENCODES a protein that exhibits heparanase activity (ortholog); syndecan binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); cell-matrix adhesion (ortholog); establishment of endothelial barrier (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endosome (ortholog); extracellular region (ortholog); heparanase complex (ortholog) NW_004955474 6367467 6394395 + 102004380 AGCD01054474;AGCD01054475;GBBH01007038;GBDI01357505;XM_013502790 XP_013358244 MODEL 9039399 protein-coding Ap3m1 adaptor related protein complex 3 subunit mu 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN postsynaptic recycling endosome (ortholog) NW_004955437 17786419 17810678 + 102004202 AGCD01034758;AGCD01034759;AGCD01034760;AGCD01034761;GBDF01261815;XM_005389931 XP_005389988 MODEL 39134439 misc_rna 7SK 7SK RNA 8922939 protein-coding LOC102017558 inactive serine/threonine-protein kinase TEX14-like NW_004955468 2755885 2769051 + 102017558 AGCD01051835;AGCD01051836;GBDF01121864;XM_013522507;XM_013522508;XM_013522509;XM_013522510;XM_013522511;XM_013522512;XM_013522513;XM_013522515;XR_001236935 XP_013377961;XP_013377962;XP_013377963;XP_013377964;XP_013377965;XP_013377966;XP_013377967;XP_013377969 MODEL 8884441 protein-coding Kcnab3 potassium voltage-gated channel subfamily A regulatory beta subunit 3 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog) NW_004955467 9013279 9020716 + 102028396 AGCD01051481;GBDI01102311;XM_005399448 XP_005399505 MODEL 8835037 protein-coding Efl1 elongation factor like GTPase 1 ENCODES a protein that exhibits GTPase activity (ortholog); ribosome binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); GTP metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); astigmatism (ortholog); Breast Cancer, Familial (ortholog) NW_004955416 12658177 12789657 - 102028855 AGCD01017212;GBDI01255378;XM_005381460;XM_005381461;XM_013512538 XP_005381517;XP_005381518;XP_013367992 MODEL 8776221 protein-coding Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) ENCODES a protein that exhibits globoside alpha-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN globoside metabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955513 2426623 2438019 - 102008134 AGCD01066880;GBBH01122771;XM_005408414;XM_005408415;XM_005408417;XM_013506552 XP_005408471;XP_005408472;XP_005408474;XP_013362006 MODEL 39133874 misc_rna 7SK 7SK RNA 8940055 protein-coding Akap3 A-kinase anchoring protein 3 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); motile cilium (ortholog); sperm fibrous sheath (ortholog) NW_004955413 2411618 2432658 - 102005353 AGCD01013545;AGCD01013546;GBDF01008114;XM_005378739 XP_005378796 MODEL 8960403 protein-coding LOC102006871 torsin-1A-interacting protein 2, isoform IFRG15 NW_004955406 19105586 19108003 - 102006871 AGCD01006074;GBDJ01313313;XM_005374968 XP_005375025 MODEL 8761309 protein-coding LOC102009124 uncharacterized LOC102009124 NW_004955447 15117933 15159860 - 102009124 AGCD01041033;AGCD01041034;AGCD01041035;AGCD01041036;AGCD01041037;GBDF01196985;XM_013518482 XP_013373936 MODEL 8736607 protein-coding Cdc14a cell division cycle 14A INVOLVED IN sensory perception of sound (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 32 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); kinociliary basal body (ortholog); kinocilium (ortholog) NW_004955435 5099576 5230252 + 102022849 AGCD01032877;AGCD01032878;GBDF01005550;GBDJ01140455;XM_013516522 XP_013371976 MODEL 9022800 protein-coding LOC102011031 odorant-binding protein 2b-like NW_004955513 2641785 2645058 + 102011031 AGCD01066883;GBBH01003721;XM_005408423;XM_013506570 XP_005408480;XP_013362024 MODEL 9053423 protein-coding LOC102008017 olfactory receptor 5M3-like NW_004955511 1648423 1649355 - 102008017 AGCD01066377;XM_005407969 XP_005408026 MODEL 8721822 protein-coding Trim11 tripartite motif containing 11 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); host-mediated suppression of symbiont invasion (ortholog); negative regulation of AIM2 inflammasome complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955581 114750 123410 + 102013126 AGCD01075657;GBDF01080297;XM_005414233;XM_005414234 XP_005414290;XP_005414291 MODEL 39134134 misc_rna 7SK 7SK RNA 8756003 protein-coding Clec4f C-type lectin domain family 4 member F ENCODES a protein that exhibits galactose binding (ortholog); glycolipid binding (ortholog); INVOLVED IN NK T cell activation (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955424 14365348 14379664 + 102003356 AGCD01024652;GBDK01322767;XM_005385608;XM_013514742;XM_013514743;XM_013514744 XP_005385665;XP_013370196;XP_013370197;XP_013370198 MODEL 8802016 ncrna LOC102004406 uncharacterized LOC102004406 NW_004955429 12619449 12635931 - 102004406 AGCD01028726;AGCD01028727;GBDF01079147;XR_261325 MODEL 8906506 protein-coding Fbxl5 F-box and leucine rich repeat protein 5 ENCODES a protein that exhibits iron ion binding (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); positive regulation of protein catabolic process (ortholog); PARTICIPATES IN iron homeostasis pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955480 8360957 8397903 + 102016266 AGCD01056720;AGCD01056721;GBCB01022848;GBDF01006353;XM_013503309 XP_013358763 MODEL 8750112 protein-coding Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ENCODES a protein that exhibits ADP binding (ortholog); ankyrin binding (ortholog); ATP binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); intracellular potassium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955435 19537224 19563631 + 102029786 AGCD01033432;AGCD01033433;GBDJ01021062;XM_005389040 XP_005389097 MODEL 8952034 protein-coding Gpr50 G protein-coupled receptor 50 ASSOCIATED WITH autism spectrum disorder (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) NW_004955498 6707630 6711854 + 102005276 AGCD01063132;AGCD01063133;XM_005406431 XP_005406488 MODEL 8794313 ncrna LOC102021635 uncharacterized LOC102021635 NW_004955462 9120697 9137546 + 102021635 AGCD01049332;GBDF01013525;XR_263109 MODEL 8889380 protein-coding Eprs1 glutamyl-prolyl-tRNA synthetase 1 ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to type II interferon (ortholog); glutamyl-tRNA aminoacylation (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955520 3550558 3606015 + 102025157 AGCD01068105;AGCD01068106;GBDF01046961;XM_005409277 XP_005409334 MODEL 8893185 protein-coding C9orf72 C9orf72-SMCR8 complex subunit ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); autophagy (ortholog); axon extension (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autoimmune disease (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autolysosome (ortholog); autophagosome (ortholog) NW_004955472 7299092 7337591 + 102018919 AGCD01053618;AGCD01053619;AGCD01053620;GBDF01297009;XM_005401124;XM_005401125;XM_005401126;XM_013522996;XM_013522997 XP_005401181;XP_005401182;XP_005401183;XP_013378450;XP_013378451 MODEL 10178266 ncrna LOC106149905 uncharacterized LOC106149905 NW_004955457 7725658 7747335 - 106149905 AGCD01046885;AGCD01046886;GBDK01094097;XR_001236376 MODEL 10287539 protein-coding Il17d interleukin 17D ENCODES a protein that exhibits cytokine activity (ortholog); protein homodimerization activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN inflammatory response (ortholog); negative regulation of hemopoiesis (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Chronic Hepatitis C (ortholog); Cytomegalovirus Infections (ortholog); hidradenitis suppurativa (ortholog); FOUND IN extracellular region (ortholog) NW_004955497 1499700 1506557 + 106146836 AGCD01062463;AGCD01062464;GBDF01304881;XM_013505463 XP_013360917 MODEL 8867797 protein-coding LOC102003691 vomeronasal type-2 receptor 116-like NW_004955532 145761 208308 + 102003691 AGCD01070101;AGCD01070102;AGCD01070103;AGCD01070104;AGCD01070105;AGCD01070106;AGCD01070107;AGCD01070108;AGCD01070109;AGCD01070110;XM_013507569 XP_013363023 MODEL 8845424 protein-coding Cdyl2 chromodomain Y like 2 ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); histone H3K9me2/3 reader activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955522 3403542 3458029 - 102028008 AGCD01068381;GBCQ01154556;XM_005409346 XP_005409403 MODEL 8892359 protein-coding Elp1 elongator acetyltransferase complex subunit 1 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); INVOLVED IN I-kappaB phosphorylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955419 18035197 18097681 + 102020672 AGCD01020168;GBDF01196206;XM_005382757;XM_013513174 XP_005382814;XP_013368628 MODEL 8936987 pseudo LOC102012671 pescadillo homolog pseudogene NW_004955428 5346972 5362433 + 102012671 AGCD01027708;XR_261310 MODEL 8845808 protein-coding Abhd12b abhydrolase domain containing 12B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955409 12007471 12036999 - 102017851 AGCD01009530;GBCC01011963;XM_005376804;XM_005376806 XP_005376861;XP_005376863 MODEL 39132238 rrna 5S_rRNA 5S ribosomal RNA 8846327 protein-coding LOC102006523 uncharacterized LOC102006523 NW_004955602 502456 576189 - 102006523 AGCD01076789;AGCD01076790;AGCD01076791;AGCD01076792;AGCD01076793;AGCD01076794;AGCD01076795;AGCD01076796;AGCD01076797;AGCD01076798;AGCD01076799;XM_013510077 XP_013365531 MODEL 8885086 protein-coding Lgsn lengsin, lens protein with glutamine synthetase domain ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955502 522492 551842 + 102024138 AGCD01064244;AGCD01064245;GBDK01178703;XM_005406877;XM_013505813 XP_005406934;XP_013361267 MODEL 39131996 rrna 5S_rRNA 5S ribosomal RNA 9050020 protein-coding Brd2 bromodomain containing 2 ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); histone H3K14ac reader activity (ortholog); histone H4K12ac reader activity (ortholog); INVOLVED IN chromatin looping (ortholog); neural tube closure (ortholog); positive regulation of T-helper 17 cell lineage commitment (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); B-cell lymphoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955437 1584890 1592486 + 102024381 AGCD01034219;GBCB01001835;XM_005389461 XP_005389518 MODEL 8939296 protein-coding Actn1 actinin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal regulatory protein binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); actin filament organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin filament (ortholog); anchoring junction (ortholog); brush border (ortholog) NW_004955466 1388507 1480990 + 102003424 AGCD01050705;AGCD01050706;AGCD01050707;AGCD01050708;GBDJ01024886;XM_005399045;XM_005399046;XM_005399047;XM_005399048 XP_005399102;XP_005399103;XP_005399104;XP_005399105 MODEL 9017643 protein-coding Chst11 carbohydrate sulfotransferase 11 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); dermatan 4-sulfotransferase activity (ortholog); N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity (ortholog); INVOLVED IN cartilage development (ortholog); chondrocyte development (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955405 38985046 39134130 + 102012275 AGCD01005494;AGCD01005495;AGCD01005496;GBCE01072737;GBDI01161466;XM_005374594;XM_005374595 XP_005374651;XP_005374652 MODEL 8773874 pseudo LOC102005444 zinc finger protein 649-like NW_004955408 34633994 34635786 + 102005444 AGCD01008914 MODEL 39134135 misc_rna 7SK 7SK RNA 9024466 protein-coding Itgb6 integrin subunit beta 6 ENCODES a protein that exhibits coreceptor activity (ortholog); integrin binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN amelogenesis (ortholog); bone development (ortholog); bronchiole development (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta type 1H (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); focal adhesion (ortholog) NW_004955449 13387013 13520879 + 102026693 AGCD01042135;AGCD01042136;AGCD01042137;AGCD01042138;GBCB01023147;XM_005393349;XM_005393354;XM_013518789 XP_005393406;XP_005393411;XP_013374243 MODEL 8952119 protein-coding Ccnb1 cyclin B1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); histone kinase activity (ortholog); patched binding (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); cellular response to iron(III) ion (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cyclin B1-CDK1 complex (ortholog); cytoplasm (ortholog) NW_004955446 140661 149500 - 102009557 AGCD01039929;GBCQ01061201;XM_005392593 XP_005392650 MODEL 8877137 pseudo LOC102009484 signal peptide peptidase-like 3 pseudogene NW_004955412 33749516 33760698 + 102009484 AGCD01013370 MODEL 39133875 misc_rna 7SK 7SK RNA 8926172 ncrna LOC102010281 uncharacterized LOC102010281 NW_004955497 1128473 1136942 + 102010281 AGCD01062452;XR_001231423;XR_264189 MODEL 9005425 protein-coding LOC102006874 immunoglobulin omega chain-like NW_004955455 6441139 6441749 + 102006874 AGCD01045796;GBDI01034310;XM_005396571 XP_005396628 MODEL 8701229 protein-coding Capn7 calpain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); MIT domain binding (ortholog); INVOLVED IN positive regulation of epithelial cell migration (ortholog); proteolysis (ortholog); self proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955430 2269274 2307801 - 102014700 AGCD01029162;GBBH01149851;GBDF01192466;XM_005387313 XP_005387370 MODEL 8786843 protein-coding Adissp adipose secreted signaling protein ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN extracellular region (ortholog) NW_004955415 14596522 14610181 - 102029737 AGCD01016300;GBCB01043999;XM_005380801 XP_005380858 MODEL 8892192 pseudo LOC102011032 aurora kinase A pseudogene NW_004955431 1227505 1229111 - 102011032 AGCD01029892 MODEL 8759223 protein-coding Cntln centlein ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); intracellular protein localization (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955434 19811100 20118185 + 102017492 AGCD01032596;AGCD01032597;AGCD01032598;AGCD01032599;AGCD01032600;AGCD01032601;AGCD01032602;AGCD01032603;AGCD01032604;AGCD01032605;AGCD01032606;AGCD01032607;AGCD01032608;GBDF01123640;XM_013516378;XM_013516379;XM_013516380;XM_013516381;XM_013516382;XM_013516383;XM_013516384;XM_013516385;XR_001234816;XR_001234817;XR_001234818 XP_013371832;XP_013371833;XP_013371834;XP_013371835;XP_013371836;XP_013371837;XP_013371838;XP_013371839 MODEL 8862766 protein-coding Trim13 tripartite motif containing 13 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin-like protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); ERAD pathway (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); perinuclear endoplasmic reticulum (ortholog) NW_004955431 3324331 3395724 + 102028005 AGCD01029962;AGCD01029963;AGCD01029964;GBCE01111270;XM_005387600;XM_013515780 XP_005387657;XP_013371234 MODEL 8745555 protein-coding Hpse2 heparanase 2 (inactive) ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); heparanase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955507 4442677 5205976 - 102014072 AGCD01065648;AGCD01065649;AGCD01065650;AGCD01065651;AGCD01065652;AGCD01065653;AGCD01065654;AGCD01065655;AGCD01065656;AGCD01065657;AGCD01065658;AGCD01065659;AGCD01065660;AGCD01065661;AGCD01065662;AGCD01065663;AGCD01065664;AGCD01065665;AGCD01065666;AGCD01065667;GBDK01049880;XM_005407665 XP_005407722 MODEL 8811681 protein-coding Angptl1 angiopoietin like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 18160164 18224822 - 102025319 AGCD01006023;AGCD01006024;GBDK01229909;XM_005374936;XM_005374937;XM_005374938;XM_013521102 XP_005374993;XP_005374994;XP_005374995;XP_013376556 MODEL 8728260 protein-coding Cfap45 cilia and flagella associated protein 45 ENCODES a protein that exhibits AMP binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); epithelial cilium movement involved in determination of left/right asymmetry (ortholog); establishment of left/right asymmetry (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal B tubule inner sheath (ortholog) NW_004955468 11672332 11711395 - 102010246 AGCD01052136;AGCD01052137;GBBH01163486;XM_005400181;XM_005400183;XM_013522501 XP_005400238;XP_005400240;XP_013377955 MODEL 8805826 protein-coding Gpr52 G protein-coupled receptor 52 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN locomotory behavior (ortholog); response to xenobiotic stimulus (ortholog) NW_004955406 14415252 14420251 + 102014008 AGCD01005964;GBDF01025623;XM_005374893;XM_005374894;XM_005374895;XM_013520909 XP_005374950;XP_005374951;XP_005374952;XP_013376363 MODEL 8798371 protein-coding Ap3m2 adaptor related protein complex 3 subunit mu 2 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synaptic vesicle (ortholog) NW_004955536 767470 900268 - 102010629 AGCD01070739;AGCD01070740;AGCD01070741;AGCD01070742;AGCD01070743;AGCD01070744;GBCE01183162;XM_005410517;XM_005410518;XM_005410519;XM_005410520 XP_005410574;XP_005410575;XP_005410576;XP_005410577 MODEL 8959319 protein-coding Il17f interleukin 17F ENCODES a protein that exhibits cytokine activity (ortholog); cytokine binding (ortholog); cytokine receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic asthma (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955411 5852767 5859208 + 102013268 AGCD01011664;XM_013510734 XP_013366188 MODEL 8768251 protein-coding Kcnb1 potassium voltage-gated channel subfamily B member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH absence epilepsy (ortholog); anxiety disorder (ortholog); astigmatism (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); cell surface (ortholog) NW_004955445 8680979 8779662 + 102005644 AGCD01039611;AGCD01039612;GBBH01197243;XM_005392330 XP_005392387 MODEL 9033286 protein-coding LOC102017561 protein FAM205CP-like NW_004955472 1277942 1292106 + 102017561 AGCD01053383;AGCD01053384;AGCD01053385;GBDF01045749;XM_005401036 XP_005401093 MODEL 8708122 protein-coding Efna1 ephrin A1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); endocardial cushion to mesenchymal transition involved in heart valve formation (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; hypoxia inducible factor pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); focal adhesion (ortholog); plasma membrane (ortholog) NW_004955545 1610929 1617217 + 102025845 AGCD01071863;GBBH01228706;XM_005411571 XP_005411628 MODEL 8917431 ncrna LOC102011434 uncharacterized LOC102011434 NW_004955470 12696997 12745344 + 102011434 AGCD01052936;AGCD01052937;GBCE01144649;XR_001237028;XR_001237029;XR_263507 MODEL 8986360 protein-coding Akap4 A-kinase anchoring protein 4 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); establishment of protein localization (ortholog); flagellated sperm motility (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); male infertility (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cilium (ortholog); motile cilium (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955543 1358086 1367838 + 102016520 AGCD01071620;AGCD01071621;GBDF01006503;XM_005411352 XP_005411409 MODEL 39131364 protein-coding CCDC148 coiled-coil domain containing 148 8879416 protein-coding Cdc14b cell division cycle 14B ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of ubiquitin protein ligase activity (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 23303472 23445785 + 102008636 AGCD01023187;AGCD01023188;AGCD01023189;AGCD01023190;GBCE01029603;XM_005384690;XM_013514076;XM_013514077;XM_013514078;XM_013514079;XM_013514080;XM_013514081;XM_013514082;XM_013514083;XM_013514084 XP_005384747;XP_013369530;XP_013369531;XP_013369532;XP_013369533;XP_013369534;XP_013369535;XP_013369536;XP_013369537;XP_013369538 MODEL 8949528 protein-coding Ceacam1 CEA cell adhesion molecule 1 ENCODES a protein that exhibits actin binding (ortholog); bile acid transmembrane transporter activity (ortholog); calmodulin binding (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); blood vessel development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Lung Neoplasms (ortholog); Spontaneous Abortions (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apical plasma membrane (ortholog) NW_004955555 426894 446235 + 102020849 AGCD01073032;GBDK01232955;XM_005412355;XM_005412357;XM_013508680;XR_264959 XP_005412412;XP_005412414;XP_013364134 MODEL 8943650 protein-coding LOC102008019 olfactory receptor 10AG1-like NW_004955511 736042 745089 + 102008019 AGCD01066342;XM_005408210 XP_005408267 MODEL 9046153 protein-coding Id4 inhibitor of DNA binding 4, HLH protein ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN brain development (ortholog); central nervous system myelination (ortholog); cerebral cortex neuron differentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955483 6598804 6601496 - 102017128 AGCD01057783;GBCE01000857;GBDI01072421;XM_005403387 XP_005403444 MODEL 8762449 protein-coding Clec4g C-type lectin domain family 4 member G ENCODES a protein that exhibits carbohydrate derivative binding (ortholog); D-mannose binding (ortholog); fructose binding (ortholog); INVOLVED IN negative regulation of T cell mediated immunity (ortholog); negative regulation of T cell proliferation (ortholog); positive regulation of viral life cycle (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955563 1571374 1574901 + 102025298 AGCD01074152;GBDI01110635;XM_005413161 XP_005413218 MODEL 8844647 protein-coding LOC102004408 olfactory receptor 8K5-like NW_004955511 1428393 1429358 + 102004408 AGCD01066366;XM_013506374 XP_013361828 MODEL 8999207 protein-coding Dynap dynactin-associated protein NW_004955402 39169208 39173132 + 102026173 AGCD01000977;GBDI01343183;NM_001371758;XM_005372951 NP_001358687;XP_005373008 INFERRED 8755903 protein-coding Fbxl6 F-box and leucine rich repeat protein 6 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955454 2976812 2979835 - 102028265 AGCD01045044;GBCQ01065686;XM_005395865;XM_013520099;XM_013520100;XM_013520101 XP_005395922;XP_013375553;XP_013375554;XP_013375555 MODEL 9057163 protein-coding Actn2 actinin alpha 2 ENCODES a protein that exhibits actin filament binding (ortholog); channel activator activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament uncapping (ortholog); cardiac muscle cell development (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); bicuspid aortic valve disease (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); filopodium (ortholog); focal adhesion (ortholog) NW_004955492 3483704 3554831 - 102016925 AGCD01060698;GBDI01007507;XM_005404929 XP_005404986 MODEL 8837092 ncrna LOC102021638 uncharacterized LOC102021638 NW_004955411 24539744 24554375 - 102021638 AGCD01012127;GBDF01145167;XR_259941 MODEL 8794119 protein-coding Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amygdala development (ortholog); ATP metabolic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); alternating esotropia (ortholog); alternating hemiplegia of childhood (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955468 11898786 11924341 + 102014344 AGCD01052139;GBDF01156916;XM_005400194 XP_005400251 MODEL 39134440 misc_rna 7SK 7SK RNA 8957804 protein-coding Ca1 carbonic anhydrase 1 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); cyanamide hydratase activity (ortholog); INVOLVED IN response to fructose (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); adult respiratory distress syndrome (ortholog); chronic pancreatitis (ortholog) NW_004955417 3270619 3313261 - 102004162 AGCD01017911;GBBH01037140;XM_005381742;XM_005381743;XM_013512805;XM_013512806;XM_013512807;XM_013512808 XP_005381799;XP_005381800;XP_013368259;XP_013368260;XP_013368261;XP_013368262 MODEL 8978227 protein-coding LOC102004028 uncharacterized PE-PGRS family protein PE_PGRS3-like NW_004955451 11193050 11196987 + 102004028 AGCD01043342;GBCE01114159;XM_005394131;XM_013519091;XM_013519092 XP_005394188;XP_013374545;XP_013374546 MODEL 39133308 misc_rna 7SK 7SK RNA 8740987 protein-coding Gbp5 guanylate binding protein 5 ENCODES a protein that exhibits GTPase activity (ortholog); identical protein binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); celiac disease (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955423 4914430 4926850 + 102011782 AGCD01023549;AGCD01023550;GBDJ01022960;XM_005385098 XP_005385155 MODEL 8841814 protein-coding Eps15 epidermal growth factor receptor pathway substrate 15 ENCODES a protein that exhibits identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); endocytic recycling (ortholog); Golgi to endosome transport (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN aggresome (ortholog); AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog) NW_004955464 7569570 7688098 + 102025773 AGCD01050065;AGCD01050066;AGCD01050067;GBCB01020993;XM_005398604;XM_013521700;XM_013521701;XM_013521702 XP_005398661;XP_013377154;XP_013377155;XP_013377156 MODEL 8765624 protein-coding Elp2 elongator acetyltransferase complex subunit 2 ENCODES a protein that exhibits protein kinase binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN regulation of receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955402 22698817 22742691 + 102009129 AGCD01000609;AGCD01000610;GBDF01125422;XM_005372807;XM_005372808 XP_005372864;XP_005372865 MODEL 9018778 pseudo LOC102012675 uncharacterized LOC102012675 NW_004955429 6718846 6761193 + 102012675 AGCD01028560;AGCD01028561;AGCD01028562;AGCD01028563;AGCD01028564 MODEL 8884281 protein-coding Abhd13 abhydrolase domain containing 13 ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); ASSOCIATED WITH thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite cytoplasm (ortholog) NW_004955404 3587277 3605649 - 102023865 AGCD01003278;GBCB01088372;XM_005374009 XP_005374066 MODEL 8779878 pseudo LOC102008390 intraflagellar transport protein 74 homolog pseudogene NW_004955411 1172768 1173854 - 102008390 AGCD01011473 MODEL 8920840 protein-coding LOC102009127 extracellular matrix protein 2 NW_004955580 238638 245468 + 102009127 AGCD01075592;AGCD01075593;GBDI01378283;XM_005414221 XP_005414278 MODEL 8880750 protein-coding Dgcr6l DiGeorge syndrome critical region gene 6 like ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog) NW_004955442 17810570 17815905 + 102020386 AGCD01037986;GBDF01004537;XM_005391720 XP_005391777 MODEL 39132239 rrna 5S_rRNA 5S ribosomal RNA 8957846 protein-coding LOC102006524 PRAME family member 9/15-like NW_004955608 205572 208767 - 102006524 AGCD01077013;AGCD01077014;GBDF01281184;XM_013510116 XP_013365570 MODEL 39131997 rrna 5S_rRNA 5S ribosomal RNA 8959594 protein-coding Lhb luteinizing hormone subunit beta INVOLVED IN luteinizing hormone signaling pathway (ortholog); PARTICIPATES IN luteinizing hormone signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Bradycardia (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog) NW_004955559 1656106 1657192 + 102025951 AGCD01073658;XM_005415296 XP_005415353 MODEL 8844512 protein-coding Brd3 bromodomain containing 3 ENCODES a protein that exhibits histone H3K18cr reader activity (ortholog); histone H3K27cr reader activity (ortholog); histone H3K9cr reader activity (ortholog); INVOLVED IN endodermal cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955513 3145267 3164791 - 102023386 AGCD01066895;AGCD01066896;GBDK01134998;XM_013506673;XM_013506674;XM_013506675;XM_013506676 XP_013362127;XP_013362128;XP_013362129;XP_013362130 MODEL 39134001 misc_rna 7SK 7SK RNA 8833168 protein-coding Chst12 carbohydrate sulfotransferase 12 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hypertension (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955460 12847440 12875614 - 102015084 AGCD01048664;GBDJ01197236;XM_005397875;XM_005397876;XM_013521288 XP_005397932;XP_005397933;XP_013376742 MODEL 8710396 pseudo LOC102005447 rho-associated protein kinase 1-like NW_004955459 1724049 1732649 + 102005447 AGCD01047977 MODEL 8791365 protein-coding Trim14 tripartite motif containing 14 ENCODES a protein that exhibits molecular adaptor activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); inflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial outer membrane (ortholog); nucleus (ortholog) NW_004955419 27390098 27420727 + 102019701 AGCD01020432;AGCD01020433;AGCD01020434;GBBH01036750;GBDI01107401;XM_013513283 XP_013368737 MODEL 8898200 protein-coding Cfap46 cilia and flagella associated protein 46 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955477 10412774 10517415 - 102014135 AGCD01055695;AGCD01055696;AGCD01055697;AGCD01055698;AGCD01055699;AGCD01055700;AGCD01055701;GBCE01169122;XM_013503028;XM_013503030;XM_013503031;XM_013503032;XR_001230822 XP_013358482;XP_013358484;XP_013358485;XP_013358486 MODEL 8844587 protein-coding LOC102003692 cytoplasmic FMR1-interacting protein 1 NW_004955533 1057633 1203027 + 102003692 AGCD01070337;AGCD01070338;AGCD01070339;AGCD01070340;AGCD01070341;AGCD01070342;AGCD01070343;AGCD01070344;AGCD01070345;AGCD01070346;AGCD01070347;AGCD01070348;GBBH01063748;GBDF01122441;XM_013507676 XP_013363130 MODEL 39133876 misc_rna 7SK 7SK RNA 8996714 protein-coding Ccnb1ip1 cyclin B1 interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst formation (ortholog); chiasma assembly (ortholog); reciprocal meiotic recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); lung cancer (ortholog); FOUND IN condensed nuclear chromosome (ortholog); synaptonemal complex (ortholog) NW_004955550 1108764 1138862 - 102021602 AGCD01072549;AGCD01072550;AGCD01072551;GBDK01013864;XM_005412050;XM_005412057;XM_005412059;XM_013508561;XM_013508562;XM_013508563;XM_013508564;XM_013508565;XM_013508566;XM_013508567;XM_013508568 XP_005412107;XP_005412114;XP_005412116;XP_013364015;XP_013364016;XP_013364017;XP_013364018;XP_013364019;XP_013364020;XP_013364021;XP_013364022 MODEL 8740002 pseudo LOC102010284 general transcription factor 3C polypeptide 6 pseudogene NW_004955500 4949060 4951908 + 102010284 AGCD01063817 MODEL 9049183 ncrna LOC102011435 uncharacterized LOC102011435 NW_004955414 23356883 23359067 - 102011435 AGCD01015497;XR_260190 MODEL 8735055 protein-coding Capn8 calpain 8 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); celiac disease (ortholog); lung cancer (ortholog) NW_004955520 1340038 1379765 + 102012235 AGCD01068051;AGCD01068052;AGCD01068053;GBCQ01188455;XM_005409235 XP_005409292 MODEL 9052014 pseudo LOC102011036 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L pseudogene NW_004955434 9417014 9421344 + 102011036 AGCD01032299;AGCD01032300 MODEL 8746803 protein-coding Adk adenosine kinase ENCODES a protein that exhibits adenosine kinase activity (ortholog); deoxyadenosine kinase activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); AMP salvage (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Hypoxia-Ischemia (ortholog); brain infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955437 17279541 17786140 - 102003281 AGCD01034744;AGCD01034745;AGCD01034746;AGCD01034747;AGCD01034748;AGCD01034749;AGCD01034750;AGCD01034751;AGCD01034752;AGCD01034753;AGCD01034754;AGCD01034755;AGCD01034756;AGCD01034757;AGCD01034758;GBDF01159873;XM_005389928;XM_005389929;XM_013516884 XP_005389985;XP_005389986;XP_013372338 MODEL 8894188 protein-coding Cntn1 contactin 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); cerebellum development (ortholog); locomotory behavior (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Ataxia (ortholog); Compton-North congenital myopathy (ortholog); Fatigue (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog); presynaptic membrane (ortholog) NW_004955500 154704 540546 + 102027999 AGCD01063632;AGCD01063633;AGCD01063634;AGCD01063635;AGCD01063636;AGCD01063637;AGCD01063638;AGCD01063639;GBBH01075341;XM_005406565;XM_005406566;XM_005406567;XM_005406568;XM_005406569 XP_005406622;XP_005406623;XP_005406624;XP_005406625;XP_005406626 MODEL 8718318 protein-coding Dynap dynactin associated protein INVOLVED IN activation of protein kinase B activity (ortholog); cellular response to ergosterol (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955402 39097723 39142938 + 102004539 AGCD01000976;AGCD01000977;XM_013510770 XP_013366224 MODEL 8721203 protein-coding Itgb7 integrin subunit beta 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); cell-matrix adhesion involved in ameboidal cell migration (ortholog); heterotypic cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cell surface (ortholog); integrin alpha4-beta7 complex (ortholog); integrin alphaE-beta7 complex (ortholog) NW_004955458 460619 478361 - 102016026 AGCD01047127;AGCD01047128;AGCD01047129;GBCE01104733;XM_005397161;XM_013520946 XP_005397218;XP_013376400 MODEL 39131518 protein-coding GPR55 G protein-coupled receptor 55 8739935 protein-coding Angptl2 angiopoietin like 2 ASSOCIATED WITH dermatomyositis (ortholog) NW_004955419 1417773 1450199 + 102006664 AGCD01019648;GBDJ01024830;XM_005382438 XP_005382495 MODEL 8881227 pseudo LOC102009487 heterogeneous nuclear ribonucleoprotein A1-like NW_004955467 9990149 9991458 + 102009487 AGCD01051538 MODEL 8773420 pseudo LOC102006876 heterogeneous nuclear ribonucleoprotein D-like pseudogene NW_004955407 20847561 20859445 - 102006876 AGCD01007345 MODEL 8890366 protein-coding Actn3 actinin alpha 3 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); focal adhesion assembly (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN brush border (ortholog); focal adhesion (ortholog); sarcomere (ortholog) NW_004955422 18799372 18812458 - 102007909 AGCD01022961;GBCB01004475;XM_005384391 XP_005384448 MODEL 8937217 protein-coding Kcnb2 potassium voltage-gated channel subfamily B member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); protein heterodimerization activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); alcohol dependence (ortholog); colorectal cancer (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); neuronal cell body membrane (ortholog) NW_004955444 7237011 7646399 - 102026681 AGCD01038903;AGCD01038904;AGCD01038905;AGCD01038906;AGCD01038907;AGCD01038908;AGCD01038909;AGCD01038910;AGCD01038911;AGCD01038912;AGCD01038913;AGCD01038914;AGCD01038915;XM_005392097 XP_005392154 MODEL 8723178 ncrna LOC102004029 uncharacterized LOC102004029 NW_004955451 12567051 12574581 - 102004029 AGCD01043406;AGCD01043407;AGCD01043408;GBDF01043422;XR_001235955 MODEL 8945473 protein-coding Il17ra interleukin 17 receptor A ENCODES a protein that exhibits interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); defense response to fungus (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955454 5230384 5252769 + 102028716 AGCD01045136;GBBH01142826;GBDK01129636;XM_005395965;XM_013520213;XM_013520214;XM_013520215 XP_005396022;XP_013375667;XP_013375668;XP_013375669 MODEL 9013475 protein-coding LOC102017562 olfactory receptor 502 NW_004955414 23671645 23672589 - 102017562 AGCD01015514;XM_013511762 XP_013367216 MODEL 10134922 pseudo LOC106149906 tetratricopeptide repeat protein 19, mitochondrial-like NW_004955457 12061294 12065929 + 106149906 AGCD01046998 MODEL 8901313 protein-coding Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); D1 dopamine receptor binding (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); blood circulation (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Abdominal Pain (ortholog); alternating hemiplegia of childhood (ortholog); Alternating Hemiplegia of Childhood 2 (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); calyx of Held (ortholog) NW_004955555 869508 892510 + 102005309 AGCD01073051;GBBH01169114;XM_005412401 XP_005412458 MODEL 9055654 protein-coding Elp3 elongator acetyltransferase complex subunit 3 ENCODES a protein that exhibits acetyltransferase activity (ortholog); INVOLVED IN central nervous system development (ortholog); neuron migration (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Animal Disease Models (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955403 50565496 50635226 + 102011270 AGCD01002967;GBDF01124985;XM_005373765;XM_005373767 XP_005373822;XP_005373824 MODEL 8799023 ncrna LOC102008020 uncharacterized LOC102008020 NW_004955512 5854546 5876484 - 102008020 AGCD01066779;AGCD01066780;GBCQ01118865;XR_264451 MODEL 8709647 protein-coding Cdc16 cell division cycle 16 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955404 47126 71602 - 102028259 AGCD01003194;GBBH01228480;GBDJ01129351;XM_013515461;XM_013515464;XM_013515469;XM_013515473;XM_013515476 XP_013370915;XP_013370918;XP_013370923;XP_013370927;XP_013370930 MODEL 8845900 ncrna LOC102021639 uncharacterized LOC102021639 NW_004955411 34857471 34861212 + 102021639 AGCD01012416;GBDF01017865;XR_001232828;XR_259953 MODEL 8775530 protein-coding LOC102004411 olfactory receptor 5D14-like NW_004955511 585205 608647 + 102004411 AGCD01066333;AGCD01066334;AGCD01066335;AGCD01066336;XM_013506359 XP_013361813 MODEL 8854849 protein-coding Hpx hemopexin INVOLVED IN heme metabolic process (ortholog); hemoglobin metabolic process (ortholog); positive regulation of humoral immune response mediated by circulating immunoglobulin (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); autoimmune disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 22158654 22169133 - 102021432 AGCD01015444;AGCD01015445;GBBH01033139;XM_005380141;XM_013511830 XP_005380198;XP_013367284 MODEL 8801000 protein-coding Gbx1 gastrulation brain homeobox 1 INVOLVED IN adult walking behavior (ortholog); neuron fate commitment (ortholog); proprioception (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN nucleus (ortholog) NW_004955491 5575836 5592804 - 102030540 AGCD01060490;AGCD01060491;GBDF01020669;GBDF01039541;XM_013504621 XP_013360075 MODEL 8899079 protein-coding LOC102009491 olfactory receptor 52N1-like NW_004955414 21756367 21757263 - 102009491 AGCD01015432;XM_013511765 XP_013367219 MODEL 9051501 protein-coding Ca10 carbonic anhydrase 10 (inactive) ENCODES a protein that exhibits neurexin family protein binding (ortholog); INVOLVED IN gene expression (ortholog); protein processing (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN synapse (ortholog) NW_004955451 9877768 10362363 + 102021197 AGCD01043313;AGCD01043314;AGCD01043315;AGCD01043316;AGCD01043317;AGCD01043318;AGCD01043319;AGCD01043320;XM_013519057 XP_013374511 MODEL 8966085 protein-coding LOC102012676 guanylate cyclase soluble subunit beta-2-like NW_004955431 4387868 4457281 - 102012676 AGCD01029996;AGCD01029997;AGCD01029998;AGCD01029999;XM_013515724 XP_013371178 MODEL 8808602 protein-coding Abhd14a abhydrolase domain containing 14A FOUND IN cytoplasm (ortholog) NW_004955532 3612440 3624797 + 102023394 AGCD01070289;AGCD01070290;AGCD01070291;GBCQ01179200;XM_005410333;XM_013507619 XP_005410390;XP_013363073 MODEL 8798348 protein-coding LOC102009128 zinc finger protein 304 NW_004955584 189872 203610 + 102009128 AGCD01075926;GBDF01154035;XM_005414360 XP_005414417 MODEL 8963075 protein-coding Ccdc148 coiled-coil domain containing 148 ASSOCIATED WITH amenorrhea (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955449 15154366 15271924 + 102029024 AGCD01042184;AGCD01042185;AGCD01042186;AGCD01042187;AGCD01042188;AGCD01042189;AGCD01042190;AGCD01042191;GBBH01121004;GBDF01254330;XM_013518715;XM_013518717;XM_013518718 XP_013374169;XP_013374171;XP_013374172 MODEL 8963970 protein-coding LOC102006527 DNA dC->dU-editing enzyme APOBEC-3C-like NW_004957268 331 1246 + 102006527 AGCD01080664;GBCC01040991;GBDJ01005875;XM_005415226 XP_005415283 MODEL 39131998 rrna 5S_rRNA 5S ribosomal RNA 8929860 protein-coding Ide insulin degrading enzyme ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta metabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955425 819461 926440 + 102006593 AGCD01025202;AGCD01025203;AGCD01025204;AGCD01025205;AGCD01025206;GBDI01296471;XM_005385825 XP_005385882 MODEL 8812332 protein-coding Ap3s1 adaptor related protein complex 3 subunit sigma 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN AP-3 adaptor complex (ortholog); membrane (ortholog); synaptic vesicle (ortholog) NW_004955408 35621062 35680620 + 102025088 AGCD01008957;AGCD01008958;AGCD01008959;AGCD01008960;GBDF01005589;XM_005376529;XM_005376530 XP_005376586;XP_005376587 MODEL 9065365 protein-coding Lhcgr luteinizing hormone/choriogonadotropin receptor ENCODES a protein that exhibits ATPase binding (ortholog); choriogonadotropin hormone binding (ortholog); choriogonadotropin hormone receptor activity (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; luteinizing hormone signaling pathway; peptide and protein hormone signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); breast cancer (ortholog); disorder of sexual development (ortholog); FOUND IN endosome (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955441 15205883 15263617 - 102023399 AGCD01037244;AGCD01037245;AGCD01037246;GBDJ01116217;XM_005391008;XM_013517564;XM_013517565;XM_013517566;XM_013517567 XP_005391065;XP_013373018;XP_013373019;XP_013373020;XP_013373021 MODEL 39134002 misc_rna 7SK 7SK RNA 39131386 protein-coding CHST13 carbohydrate sulfotransferase 13 9032373 ncrna LOC102011037 uncharacterized LOC102011037 NW_004955435 7325862 7336787 - 102011037 AGCD01032952;AGCD01032953;AGCD01032954;GBDF01178841;XR_261667 MODEL 39134441 misc_rna 7SK 7SK RNA 8716548 protein-coding LOC102005449 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 10831510 10832892 + 102005449 AGCD01048617;XM_013521142 XP_013376596 MODEL 8965086 protein-coding Cntn2 contactin 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); cell adhesion mediator activity (ortholog); INVOLVED IN adult walking behavior (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cell surface (ortholog) NW_004955406 40831897 40862445 + 102004238 AGCD01006667;GBDI01153597;XM_005375340 XP_005375397 MODEL 8733238 protein-coding Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 4A (ortholog); autosomal dominant nonsyndromic deafness 4B (ortholog); autosomal recessive nonsyndromic deafness 113 (ortholog); FOUND IN extracellular region (ortholog); stereocilium tip (ortholog) NW_004955555 1859220 1878912 + 102026359 AGCD01073108;AGCD01073109;AGCD01073110;GBDF01006879;XM_005412473 XP_005412530 MODEL 8703493 protein-coding Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 INVOLVED IN synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN clathrin coat of coated pit (ortholog); presynapse (ortholog) NW_004955524 1264035 1309394 + 102029784 AGCD01068741;AGCD01068742;GBCE01030448;XM_013507228;XM_013507229;XM_013507230;XM_013507231 XP_013362682;XP_013362683;XP_013362684;XP_013362685 MODEL 39133397 misc_rna 7SK 7SK RNA 8734140 protein-coding Cfap52 cilia and flagella associated protein 52 INVOLVED IN establishment of left/right asymmetry (ortholog); flagellated sperm motility (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN 9+2 motile cilium (ortholog); axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog) NW_004955467 7461258 7524178 - 102009485 AGCD01051436;AGCD01051437;GBDI01009801;XM_005399379;XM_005399380;XM_005399382 XP_005399436;XP_005399437;XP_005399439 MODEL 8936120 protein-coding LOC102003694 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like NW_004955538 3385693 3395187 - 102003694 AGCD01071162;GBCE01032832;XM_005410855;XM_013507906;XM_013507908;XM_013507909;XM_013507910;XR_001232100 XP_005410912;XP_013363360;XP_013363362;XP_013363363;XP_013363364 MODEL 9005946 protein-coding Akap5 A-kinase anchoring protein 5 ENCODES a protein that exhibits actin binding (ortholog); adenylate cyclase binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amylase secretion (ortholog); calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); COVID-19 (ortholog); FOUND IN asymmetric synapse (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955466 5411190 5422043 - 102029603 AGCD01050879;AGCD01050880;AGCD01050881;GBDJ01123085;XM_005399128;XM_005399129 XP_005399185;XP_005399186 MODEL 8808006 protein-coding LOC102006881 uncharacterized protein C2orf78-like NW_004955409 19070835 19072914 - 102006881 AGCD01009855;AGCD01009856;GBDF01127547;GBDF01127548;XM_005377161 XP_005377218 MODEL 39133877 misc_rna 7SK 7SK RNA 8887040 protein-coding LOC102008392 olfactory receptor 147-like NW_004955412 25370885 25371823 - 102008392 AGCD01013151;XM_005378421 XP_005378478 MODEL 8882628 protein-coding Il17rb interleukin 17 receptor B INVOLVED IN positive regulation of inflammatory response (ortholog); positive regulation of interleukin-13 production (ortholog); positive regulation of interleukin-5 production (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955430 3831665 3847366 + 102004410 AGCD01029228;AGCD01029229;GBCQ01129637;XM_005387375 XP_005387432 MODEL 39132241 rrna 5S_rRNA 5S ribosomal RNA 9014307 pseudo LOC102012678 60S ribosomal protein L26 pseudogene NW_004955523 522319 523767 - 102012678 AGCD01068463 MODEL 8799804 protein-coding Efna2 ephrin A2 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); bone remodeling (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN neuromuscular junction (ortholog); perikaryon (ortholog) NW_004955495 6614828 6627287 - 102007446 AGCD01062085;GBBH01085949;XM_013505059 XP_013360513 MODEL 8883171 protein-coding Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); cardiac muscle contraction (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955462 8072519 8095311 - 102016245 AGCD01049314;AGCD01049315;GBBH01031781;GBDI01007069;XM_005398203 XP_005398260 MODEL 9015649 ncrna LOC102008027 uncharacterized LOC102008027 NW_004955530 1812786 1910843 - 102008027 AGCD01069900;AGCD01069901;AGCD01069902;GBDF01148074;XR_001232002 MODEL 8914806 protein-coding Capn9 calpain 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955492 7809188 7845090 - 102011876 AGCD01060804;GBBH01138772;XM_005404988 XP_005405045 MODEL 8898049 protein-coding Fbxl7 F-box and leucine rich repeat protein 7 INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); mitotic cell cycle (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955426 4659787 5044074 + 102010181 AGCD01026106;AGCD01026107;AGCD01026108;AGCD01026109;AGCD01026110;AGCD01026111;GBDF01113132;GBDI01354947;XM_005386127 XP_005386184 MODEL 9014263 protein-coding Adm adrenomedullin ENCODES a protein that exhibits adrenomedullin receptor binding (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); androgen metabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; p38 MAPK signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acidoses (ortholog); Albuminuria (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955414 25951473 25953593 + 102004695 AGCD01015635;GBCE01160076;XM_005380275 XP_005380332 MODEL 8896712 pseudo LOC102021640 L-lactate dehydrogenase B chain pseudogene NW_004955464 13204250 13218462 + 102021640 AGCD01050262;AGCD01050263;AGCD01050264 MODEL 8805524 protein-coding Trim15 tripartite motif containing 15 ENCODES a protein that exhibits molecular sequestering activity (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of intracellular transport of viral material (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955583 277564 283422 + 102029919 AGCD01075808;XM_013509792 XP_013365246 MODEL 8862861 protein-coding Itgb8 integrin subunit beta 8 ENCODES a protein that exhibits coreceptor activity (ortholog); extracellular matrix protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); cell-matrix adhesion (ortholog); ganglioside metabolic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); integrin alphav-beta8 complex (ortholog); plasma membrane (ortholog) NW_004955410 23011874 23099191 + 102003631 AGCD01011091;AGCD01011092;GBCE01145783;XM_005377365 XP_005377422 MODEL 8870766 protein-coding Dync1h1 dynein cytoplasmic 1 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); identical protein binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to nerve growth factor stimulus (ortholog); establishment of spindle localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955538 1388595 1458166 + 102025509 AGCD01071057;AGCD01071058;AGCD01071059;AGCD01071060;AGCD01071061;AGCD01071062;AGCD01071063;GBBH01031319;GBCB01112090;XM_013507827;XM_013507828 XP_013363281;XP_013363282 MODEL 8866049 protein-coding Gpr55 G protein-coupled receptor 55 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN bone resorption (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); hyperglycemia (ortholog); Hypertriglyceridemia (ortholog); FOUND IN plasma membrane (ortholog) NW_004955453 4470602 4520036 + 102024754 AGCD01044691;AGCD01044692;GBDF01222892;XM_005395405;XM_005395406;XM_005395407;XM_013519755;XR_001236125 XP_005395462;XP_005395463;XP_005395464;XP_013375209 MODEL 8952193 protein-coding Kcnc1 potassium voltage-gated channel subfamily C member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); kinesin binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); cerebellum development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cerebellar ataxia (ortholog); Cognitive Dysfunction (ortholog); FOUND IN axolemma (ortholog); calyx of Held (ortholog); cell surface (ortholog) NW_004955414 32538968 32580370 + 102013926 AGCD01015782;GBCB01098052;XM_005380395 XP_005380452 MODEL 8922735 protein-coding Gbx2 gastrulation brain homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); axon guidance (ortholog); branching involved in blood vessel morphogenesis (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); stomach cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955453 538066 541415 + 102029586 AGCD01044594;AGCD01044595;XM_013519759 XP_013375213 MODEL 9035097 protein-coding LOC102004030 prolactin-like NW_004955990 1149 6207 - 102004030 AGCD01078817;AGCD01078818;AGCD01078819;XM_005415158 XP_005415215 MODEL 9062423 pseudo LOC102017567 chromobox protein homolog 5 pseudogene NW_004955417 26988906 26990379 + 102017567 AGCD01018530 MODEL 8775184 protein-coding Ccnb2 cyclin B2 INVOLVED IN G2/MI transition of meiotic cell cycle (ortholog); in utero embryonic development (ortholog); negative regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 15558874 15587456 - 102013782 AGCD01042795;AGCD01042796;AGCD01042797;GBDF01009616;XM_005393834;XM_013518870 XP_005393891;XP_013374324 MODEL 8899007 protein-coding Ca11 carbonic anhydrase 11 (inactive) ENCODES a protein that exhibits neurexin family protein binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955559 1910421 1914988 + 102006719 AGCD01073681;GBDI01170586;XM_005412940 XP_005412997 MODEL 151707871 protein-coding BRD3OS BRD3 opposite strand 9033393 protein-coding Ccdc149 coiled-coil domain containing 149 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955480 156614 252370 + 102022919 AGCD01056579;AGCD01056580;GBDI01258774;XM_013503308 XP_013358762 MODEL 8764029 protein-coding Elp4 elongator acetyltransferase complex subunit 4 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH aniridia (ortholog); aniridia 1 (ortholog); Aniridia 2 (ortholog); FOUND IN cytoplasm (ortholog); elongator holoenzyme complex (ortholog); nucleoplasm (ortholog) NW_004955476 9850110 10054313 + 102025238 AGCD01055400;AGCD01055401;AGCD01055402;AGCD01055403;AGCD01055404;AGCD01055405;AGCD01055406;AGCD01055407;GBDF01160723;XM_005401773;XM_005401774 XP_005401830;XP_005401831 MODEL 39131999 rrna 5S_rRNA 5S ribosomal RNA 8982394 protein-coding LOC102010292 olfactory receptor 1019 NW_004955511 1765100 1766038 + 102010292 AGCD01066379;XM_005407976 XP_005408033 MODEL 39131423 protein-coding AP3S2 adaptor related protein complex 3 subunit sigma 2 8987453 ncrna LOC102004412 uncharacterized LOC102004412 NW_004955513 2245105 2262741 + 102004412 AGCD01066871;AGCD01066872;GBDF01085197;XR_001231734;XR_264457 MODEL 8780496 protein-coding Ceacam19 CEA cell adhesion molecule 19 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955555 1850356 1857551 + 102026047 AGCD01073107;AGCD01073108;XM_005412472;XM_013508675 XP_005412529;XP_013364129 MODEL 8911307 protein-coding Clec5a C-type lectin domain containing 5A ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN innate immune response (ortholog); myeloid cell differentiation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); dengue hemorrhagic fever (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955494 1683926 1694914 + 102012549 AGCD01061419;GBBH01222149;XM_005405398;XM_005405399;XM_013505006;XM_013505007;XM_013505008 XP_005405455;XP_005405456;XP_013360460;XP_013360461;XP_013360462 MODEL 8772816 protein-coding Dgcr8 DGCR8 microprocessor complex subunit ENCODES a protein that exhibits double-stranded RNA binding (ortholog); heme binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of pre-miRNA processing (ortholog); primary miRNA processing (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); microprocessor complex (ortholog) NW_004955442 17998565 18034247 - 102025296 AGCD01037991;AGCD01037992;AGCD01037993;AGCD01037994;GBCE01023470;XM_005391742;XM_013517769 XP_005391799;XP_013373223 MODEL 8795283 protein-coding Hr HR lysine demethylase and nuclear receptor corepressor ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); nuclear vitamin D receptor binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH alopecia (ortholog); alopecia universalis (ortholog); atrichia with papular lesions (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955403 45605870 45624386 - 102003402 AGCD01002824;GBDJ01313713;XM_005373647;XM_013513748;XM_013513749;XM_013513757;XR_001233863 XP_005373704;XP_013369202;XP_013369203;XP_013369211 MODEL 8714655 protein-coding LOC102011437 phospholipid-transporting ATPase FetA-like NW_004955472 770636 868645 - 102011437 AGCD01053355;AGCD01053356;AGCD01053357;AGCD01053358;AGCD01053359;AGCD01053360;AGCD01053361;AGCD01053362;AGCD01053363;GBDK01126213;XM_005401014;XM_005401015;XM_013523039;XM_013523040;XM_013523041;XM_013523042;XM_013523043 XP_005401071;XP_005401072;XP_013378493;XP_013378494;XP_013378495;XP_013378496;XP_013378497 MODEL 8953536 protein-coding LOC102009133 vomeronasal type-1 receptor 4-like NW_004955603 230078 230680 + 102009133 AGCD01076823;XM_005414842 XP_005414899 MODEL 10082678 protein-coding Cdc20 cell division cycle 20 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); histone deacetylase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); metaphase/anaphase transition of cell cycle (ortholog); metaphase/anaphase transition of meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); kinetochore (ortholog) NW_004955537 2941265 2945158 + 106146263 AGCD01070940;GBDF01008741;XM_013507747 XP_013363201 MODEL 8778277 protein-coding Actn4 actinin alpha 4 ENCODES a protein that exhibits actin filament binding (ortholog); chromatin DNA binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); bicellular tight junction assembly (ortholog); gene expression (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); anchoring junction (ortholog); cell-cell junction (ortholog) NW_004955468 770573 841859 - 102010788 AGCD01051739;AGCD01051740;GBCB01059599;XM_005399834;XM_005399835;XM_013522442 XP_005399891;XP_005399892;XP_013377896 MODEL 8875574 protein-coding Il17rc interleukin 17 receptor C ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN defense response to fungus (ortholog); granulocyte chemotaxis (ortholog); interleukin-17A-mediated signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Candidiasis, Familial, 9 (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955561 1410100 1423041 + 102010952 AGCD01073855;GBCB01095866;XM_005413040;XM_005413041;XM_005413042;XM_005413044;XM_013509087;XM_013509088 XP_005413097;XP_005413098;XP_005413099;XP_005413101;XP_013364541;XP_013364542 MODEL 10277301 protein-coding Chst13 carbohydrate sulfotransferase 13 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog) NW_004955421 21770083 21787563 + 106148435 AGCD01022117;AGCD01022118;AGCD01022119;GBCE01150800;XM_013513809 XP_013369263 MODEL 8717172 pseudo LOC102008034 MAP3K12-binding inhibitory protein 1 pseudogene NW_004955441 160336 161394 + 102008034 AGCD01036685 MODEL 39134442 misc_rna 7SK 7SK RNA 8833527 protein-coding Eps8 EGFR pathway substrate 8, signaling adaptor ENCODES a protein that exhibits actin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 102 (ortholog); autosomal recessive nonsyndromic deafness 106 (ortholog); brain disease (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); glutamatergic synapse (ortholog) NW_004955413 12267701 12386088 - 102005356 AGCD01013986;AGCD01013987;AGCD01013988;GBDI01290198;XM_005379018;XM_005379019;XM_005379020 XP_005379075;XP_005379076;XP_005379077 MODEL 8904572 protein-coding LOC102011040 olfactory receptor 56-like NW_004955530 191959 192906 + 102011040 AGCD01069832;XM_005410119 XP_005410176 MODEL 8733211 protein-coding Cntn3 contactin 3 INVOLVED IN neuron projection development (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955421 13688779 14008546 + 102025806 AGCD01021948;AGCD01021949;GBCE01078956;XM_005383763 XP_005383820 MODEL 8855320 pseudo LOC102009492 RNA-binding protein with serine-rich domain 1 pseudogene NW_004955415 3192634 3193526 - 102009492 AGCD01015927 MODEL 39133421 misc_rna 7SK 7SK RNA 8814206 protein-coding Idh1 isocitrate dehydrogenase (NADP(+)) 1 ENCODES a protein that exhibits identical protein binding (ortholog); isocitrate dehydrogenase (NADP+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); female gonad development (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955457 6851542 6869452 + 102006982 AGCD01046855;AY463492;GBDJ01134359;XM_005396966 XP_005397023 MODEL 8839556 protein-coding LOC102003701 vomeronasal type-1 receptor 1-like NW_004955558 687163 688056 + 102003701 AGCD01073385;XM_005412741 XP_005412798 MODEL 39133878 misc_rna 7SK 7SK RNA 8741120 protein-coding Gc GC vitamin D binding protein ENCODES a protein that exhibits actin binding (ortholog); calcidiol binding (ortholog); vitamin D binding (ortholog); INVOLVED IN female pregnancy (ortholog); lactation (ortholog); response to estradiol (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955447 1361698 1400633 + 102020622 AGCD01040519;GBDI01295719;XM_005392770;XR_262404 XP_005392827 MODEL 8749578 pseudo LOC102006883 regulator of nonsense transcripts 2 pseudogene NW_004955463 5813626 5816741 + 102006883 AGCD01049644 MODEL 10236746 protein-coding LOC106149907 translation initiation factor IF-2-like NW_004955457 7490189 7514301 - 106149907 AGCD01046883;GBCQ01126269;GBDK01124100;XM_013520660 XP_013376114 MODEL 39132243 rrna 5S_rRNA 5S ribosomal RNA 8824120 ncrna LOC102012680 uncharacterized LOC102012680 NW_004955435 7947806 7951442 - 102012680 AGCD01032982;GBDF01049854;XR_001234875;XR_001234876;XR_001234877 MODEL 8714964 protein-coding Dgka diacylglycerol kinase alpha ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955458 3517519 3544651 + 102024532 AGCD01047314;AGCD01047315;AGCD01047316;AGCD01047317;GBCE01166881;XM_005397269;XM_013520902;XM_013520903;XM_013520904;XM_013520905 XP_005397326;XP_013376356;XP_013376357;XP_013376358;XP_013376359 MODEL 8994935 protein-coding Capns1 calpain small subunit 1 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN calpain complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955468 2446631 2454369 - 102009268 AGCD01051817;AGCD01051818;GBCB01005315;XM_013522335 XP_013377789 MODEL 9004461 protein-coding Atp1b2 ATPase Na+/K+ transporting subunit beta 2 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN cell-substrate adhesion (ortholog); intracellular potassium ion homeostasis (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cerebellar ataxia (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte end-foot (ortholog); astrocyte projection (ortholog) NW_004955467 9261775 9268743 - 102005129 AGCD01051486;GBDF01252804;XM_005399462 XP_005399519 MODEL 8776912 ncrna LOC102005450 uncharacterized LOC102005450 NW_004955409 37458586 37465397 - 102005450 AGCD01010520;GBDJ01346495;XR_001232672;XR_259810 MODEL 9032997 protein-coding Angptl3 angiopoietin like 3 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); growth factor activity (ortholog); integrin binding (ortholog); INVOLVED IN acylglycerol homeostasis (ortholog); artery morphogenesis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN lipid metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); familial hypobetalipoproteinemia 2 (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular region (ortholog) NW_004955423 27113378 27121339 - 102010380 AGCD01024115;GBCQ01000094;XM_005385334 XP_005385391 MODEL 8794491 protein-coding Adm2 adrenomedullin 2 ENCODES a protein that exhibits hormone activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); angiogenesis (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); phlebitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955413 33460975 33469935 + 102028629 AGCD01014670;AGCD01014671;AGCD01014672;GBDF01106640;XM_005379567 XP_005379624 MODEL 8902002 pseudo LOC102021641 cytoskeleton-associated protein 2 pseudogene NW_004955411 29344641 29345901 - 102021641 AGCD01012235 MODEL 8900195 protein-coding Ap4b1 adaptor related protein complex 4 subunit beta 1 INVOLVED IN protein localization to somatodendritic compartment (ortholog); protein targeting (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 47 (ortholog); FOUND IN AP-4 adaptor complex (ortholog); cytoplasmic side of trans-Golgi network transport vesicle membrane (ortholog); cytosol (ortholog) NW_004955435 17163099 17173427 - 102015562 AGCD01033347;GBCB01025564;XM_005388988;XM_005388989;XM_005388990;XM_005388991;XM_013516537 XP_005389045;XP_005389046;XP_005389047;XP_005389048;XP_013371991 MODEL 8881476 protein-coding Ceacam20 CEA cell adhesion molecule 20 INVOLVED IN positive regulation of cytokine production (ortholog); response to bacterium (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Ehrlich tumor carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); microvillus membrane (ortholog) NW_004955555 1752634 1769148 - 102020294 AGCD01073099;AGCD01073100;GBDJ01022804;XM_013508670 XP_013364124 MODEL 8873880 protein-coding Dync1i1 dynein cytoplasmic 1 intermediate chain 1 ENCODES a protein that exhibits dynein light chain binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN intracellular transport of virus (ortholog); vesicle transport along microtubule (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN axon cytoplasm (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955432 12383582 12657491 + 102018961 AGCD01030978;AGCD01030979;AGCD01030980;AGCD01030981;AGCD01030982;AGCD01030983;AGCD01030984;AGCD01030985;AGCD01030986;GBDF01161863;GBDI01243738;XM_013516078 XP_013371532 MODEL 9010540 protein-coding Trim16 tripartite motif containing 16 ENCODES a protein that exhibits DNA binding (ortholog); interleukin-1 binding (ortholog); NACHT domain binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of interleukin-1 beta production (ortholog); positive regulation of keratinocyte differentiation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); Ovarian Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); PML body (ortholog) NW_004955467 2059793 2084221 + 102018703 AGCD01051300;GBCE01172297;XM_005399325 XP_005399382 MODEL 8712765 protein-coding Cfap53 cilia and flagella associated protein 53 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); dextrocardia (ortholog); genetic disease (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal A tubule inner sheath (ortholog) NW_004955402 35295007 35318800 - 102015679 AGCD01000878;GBDJ01272671;XM_005372915;XM_013510706 XP_005372972;XP_013366160 MODEL 9066868 protein-coding LOC102004031 uncharacterized LOC102004031 NW_004955452 2163418 2166480 - 102004031 AGCD01043879;GBDF01008884;XM_005394728;XM_005394730;XM_013519464;XM_013519465;XM_013519466;XM_013519467;XM_013519468 XP_005394785;XP_005394787;XP_013374918;XP_013374919;XP_013374920;XP_013374921;XP_013374922 MODEL 8884494 protein-coding LOC102006528 L-gulonolactone oxidase NW_004955403 50132066 50154216 + 102006528 AGCD01002959;GBCE01014649;XM_005373748;XM_005373749;XM_013514239;XM_013514245 XP_005373805;XP_005373806;XP_013369693;XP_013369699 MODEL 8972251 protein-coding Akap6 A-kinase anchoring protein 6 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN action potential (ortholog); cAMP/PKA signal transduction (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH anorexia nervosa (ortholog); atrial fibrillation (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN calcium channel complex (ortholog); caveola (ortholog); cytoplasm (ortholog) NW_004955409 28067814 28516881 - 102008602 AGCD01010226;AGCD01010227;AGCD01010228;AGCD01010229;AGCD01010230;AGCD01010231;AGCD01010232;AGCD01010233;AGCD01010234;AGCD01010235;AGCD01010236;GBCB01023293;XM_005376946;XM_013510378 XP_005377003;XP_013365832 MODEL 8991053 pseudo LOC102017571 zinc finger protein 23 pseudogene NW_004955418 4269959 4271996 + 102017571 AGCD01018816 MODEL 8704192 protein-coding Ca12 carbonic anhydrase 12 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN chloride ion homeostasis (ortholog); estrous cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955450 11927730 11975553 + 102026927 AGCD01042685;GBBH01177179;XM_013518981 XP_013374435 MODEL 39134003 misc_rna 7SK 7SK RNA 8983413 protein-coding Efna3 ephrin A3 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); negative regulation of angiogenesis (ortholog); positive regulation of amyloid precursor protein catabolic process (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis NW_004955545 1570351 1578610 + 102024852 AGCD01071860;AGCD01071861;GBBH01189460;XM_005411568;XM_005411570;XM_013508362;XM_013508363 XP_005411625;XP_005411627;XP_013363816;XP_013363817 MODEL 8959395 protein-coding Ccdc15 coiled-coil domain containing 15 INVOLVED IN cilium assembly (ortholog); positive regulation of centriole elongation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955412 26014842 26089556 + 102017319 AGCD01013183;GBDF01160257;XM_005378449;XM_005378450;XM_005378451;XM_005378452;XM_005378453;XM_013511257 XP_005378506;XP_005378507;XP_005378508;XP_005378509;XP_005378510;XP_013366711 MODEL 8996108 protein-coding Elp5 elongator acetyltransferase complex subunit 5 INVOLVED IN positive regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955467 9654532 9660035 - 102024204 AGCD01051520;GBDF01005053;XM_005399532;XM_005399533;XM_005399534;XM_013522088 XP_005399589;XP_005399590;XP_005399591;XP_013377542 MODEL 39132000 rrna 5S_rRNA 5S ribosomal RNA 8806508 pseudo LOC102010293 olfactory receptor 10AG1-like NW_004955511 885492 889414 - 102010293 AGCD01066346 MODEL 9002280 protein-coding LOC102008394 arachidonate 12-lipoxygenase, 12S-type NW_004955467 9919322 9931806 - 102008394 AGCD01051535;AGCD01051536;GBBH01140041;XM_005399578 XP_005399635 MODEL 39134443 misc_rna 7SK 7SK RNA 8927919 protein-coding Eps8l1 EPS8 signaling adaptor L1 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); T cell receptor binding (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ruffle membrane (ortholog) NW_004955567 1074714 1084259 - 102006837 AGCD01074458;AGCD01074459;GBCE01000821;XM_013509255;XM_013509256;XM_013509257;XM_013509258 XP_013364709;XP_013364710;XP_013364711;XP_013364712 MODEL 8838588 protein-coding Gpr6 G protein-coupled receptor 6 ENCODES a protein that exhibits sphingosine-1-phosphate receptor activity (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog) NW_004955411 34781598 34783926 + 102021322 AGCD01012416;XM_005377881 XP_005377938 MODEL 8868229 protein-coding Abhd14b abhydrolase domain containing 14B ENCODES a protein that exhibits hydrolase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955532 3615214 3619637 - 102023739 AGCD01070290;GBBH01228009;GBDI01068224;XM_005410334 XP_005410391 MODEL 39131543 protein-coding CLEC7A C-type lectin domain containing 7A 8722938 protein-coding Cntn4 contactin 4 INVOLVED IN brain development (ortholog); negative regulation of neuron differentiation (ortholog); nervous system development (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog) NW_004955421 10267471 10928734 - 102022503 AGCD01021872;AGCD01021873;AGCD01021874;AGCD01021875;AGCD01021876;AGCD01021877;AGCD01021878;AGCD01021879;AGCD01021880;AGCD01021881;AGCD01021882;AGCD01021883;AGCD01021884;AGCD01021885;GBDI01025726;XM_005383751;XM_005383752;XM_005383753;XM_005383754;XM_013513798;XM_013513799 XP_005383808;XP_005383809;XP_005383810;XP_005383811;XP_013369252;XP_013369253 MODEL 9009582 protein-coding Cfap54 cilia and flagella associated protein 54 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); cilium movement involved in cell motility (ortholog); ASSOCIATED WITH Primary Ciliary Dyskinesia 54 (ortholog); Spermatogenic Failure 98 (ortholog); spermatogenic failure 98 (ortholog) NW_004955405 32728455 33036612 + 102010664 AGCD01005342;AGCD01005343;AGCD01005344;AGCD01005345;AGCD01005346;AGCD01005347;AGCD01005348;AGCD01005349;AGCD01005350;GBDF01128253;XM_005374497;XM_013518536;XM_013518540;XM_013518543;XM_013518547 XP_005374554;XP_013373990;XP_013373994;XP_013373997;XP_013374001 MODEL 8952216 protein-coding Hras HRas proto-oncogene, GTPase ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to gamma radiation (ortholog); cellular senescence (ortholog); PARTICIPATES IN adenosine signaling pathway; endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955476 11508446 11510333 + 102015839 AGCD01055461;GBBH01092203;XM_005401836;XM_005401837 XP_005401893;XP_005401894 MODEL 8916616 pseudo LOC102009135 cyclin-G1 pseudogene NW_004955647 79945 80944 + 102009135 AGCD01077761 MODEL 8765834 protein-coding Gca grancalcin ENCODES a protein that exhibits calcium ion binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955449 11503201 11538809 - 102017289 AGCD01042091;GBBH01101864;XM_013518747;XM_013518748;XM_013518749;XM_013518750 XP_013374201;XP_013374202;XP_013374203;XP_013374204 MODEL 8861639 protein-coding Ccnb3 cyclin B3 ASSOCIATED WITH autistic disorder (ortholog); Habitual Abortions (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955543 1377932 1444327 + 102016850 AGCD01071621;AGCD01071622;GBDF01192859;XM_005411353;XM_005411354;XM_013508133 XP_005411410;XP_005411411;XP_013363587 MODEL 8830561 protein-coding Brd4 bromodomain containing 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); chromatin remodeling (ortholog); chromosome segregation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); autosomal dominant intellectual developmental disorder 23 (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955495 7959033 7989216 + 102009518 AGCD01062173;GBDF01154291;XM_013505125 XP_013360579 MODEL 9019187 protein-coding Lhfpl1 LHFPL tetraspan subfamily member 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955490 3156323 3215925 + 102028761 AGCD01060160;AGCD01060161;GBCB01097424;XM_005404629;XM_005404630 XP_005404686;XP_005404687 MODEL 39132244 rrna 5S_rRNA 5S ribosomal RNA 8870437 pseudo LOC102012683 cyclin-dependent kinase 1-like NW_004955530 1703354 1747813 + 102012683 AGCD01069897;AGCD01069898;AGCD01069899 MODEL 8720467 protein-coding Il17rd interleukin 17 receptor D INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); arteriovenous malformations of the brain (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955430 6842756 6873195 - 102013322 AGCD01029316;GBDK01095576;GBDK01353156;XM_013515704 XP_013371158 MODEL 8864043 protein-coding Fbxl8 F-box and leucine rich repeat protein 8 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955484 9452870 9456239 - 102014672 AGCD01058415;GBDK01393588;XM_005403693;XM_005403694;XM_013503961 XP_005403750;XP_005403751;XP_013359415 MODEL 8907454 protein-coding Actr10 actin related protein 10 INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); microtubule-based movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN dynactin complex (ortholog) NW_004955466 11948711 11969981 + 102029949 AGCD01051106;GBBH01061775;XM_005399211 XP_005399268 MODEL 8881797 pseudo LOC102004416 RE1-silencing transcription factor-like NW_004955515 4007565 4012720 + 102004416 AGCD01067313 MODEL 8860643 protein-coding Capns2 calpain small subunit 2 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog) NW_004955433 13106820 13107865 + 102005625 AGCD01031676;GBDI01243871;XM_005388318 XP_005388375 MODEL 8974701 pseudo LOC102008035 epimerase family protein SDR39U1 pseudogene NW_004955548 325489 327240 - 102008035 AGCD01072330 MODEL 9017016 protein-coding Itgbl1 integrin subunit beta like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog) NW_004955404 9331407 9545711 - 102004665 AGCD01003368;AGCD01003369;AGCD01003370;GBDI01054502;XM_005374034 XP_005374091 MODEL 8860755 ncrna LOC102011050 uncharacterized LOC102011050 NW_004955440 19071638 19074811 - 102011050 AGCD01036626;GBDF01013047;XR_262047 MODEL 9060759 protein-coding LOC102010294 chromosome unknown open reading frame, human C4orf50 NW_004955514 4112935 4206895 + 102010294 AGCD01067127;AGCD01067128;GBDF01183618;XM_005408860 XP_005408917 MODEL 8767252 protein-coding Kcnc2 potassium voltage-gated channel subfamily C member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN action potential (ortholog); cellular response to ammonium ion (ortholog); cellular response to nitric oxide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 103 (ortholog); FOUND IN apical plasma membrane (ortholog); axolemma (ortholog); axon (ortholog) NW_004955405 14420447 14599780 - 102020877 AGCD01004923;AGCD01004924;AGCD01004925;AGCD01004926;AGCD01004927;AGCD01004928;GBCE01027931;GBDF01177927;XM_013517673 XP_013373127 MODEL 39133426 misc_rna 7SK 7SK RNA 9012098 protein-coding Adnp activity dependent neuroprotector homeobox ENCODES a protein that exhibits beta-catenin binding (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cGMP metabolic process (ortholog); estrous cycle (ortholog); ASSOCIATED WITH Abdominal Obesity (ortholog); allergic disease (ortholog); allergic rhinitis (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); extracellular region (ortholog) NW_004955445 7498223 7530828 + 102022978 AGCD01039543;GBBH01187236;GBCE01134997;XM_005392308 XP_005392365 MODEL 39133879 misc_rna 7SK 7SK RNA 8980539 ncrna LOC102004039 uncharacterized LOC102004039 NW_004955407 34849285 34853966 + 102004039 AGCD01007727;GBDF01120859;XR_001231203 MODEL 8908789 ncrna LOC102003703 uncharacterized LOC102003703 NW_004955444 18667764 18677902 + 102003703 AGCD01039249;GBBH01195406;XR_001235492 MODEL 8820249 ncrna LOC102006884 uncharacterized LOC102006884 NW_004955464 10682579 10683956 - 102006884 AGCD01050127;GBCE01067008;XR_001236703;XR_001236704 MODEL 8936399 ncrna LOC102017574 uncharacterized LOC102017574 NW_004955419 16993391 17030182 + 102017574 AGCD01020138;AGCD01020139;GBDF01119453;XR_001233601;XR_001233602;XR_001233603;XR_001233604;XR_001233605;XR_260638;XR_260639 MODEL 9058104 protein-coding Cdc20b cell division cycle 20B INVOLVED IN de novo centriole assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); Triple Negative Breast Neoplasms (ortholog); FOUND IN deuterosome (ortholog) NW_004955446 12494176 12551397 + 102020391 AGCD01040235;AGCD01040236;AGCD01040237;GBDF01100721;XM_005392708;XM_013518457;XM_013518458 XP_005392765;XP_013373911;XP_013373912 MODEL 9043789 pseudo LOC102009499 60S ribosomal protein L17 pseudogene NW_004955417 3418704 3419219 - 102009499 AGCD01017914 MODEL 8956036 protein-coding Chst14 carbohydrate sulfotransferase 14 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan metabolic process (ortholog); ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); autism spectrum disorder (ortholog); clubfoot (ortholog) NW_004955416 7391281 7393137 + 102021967 AGCD01016977;GBCQ01154295;GBDJ01229673;XM_005381242 XP_005381299 MODEL 39132001 rrna 5S_rRNA 5S ribosomal RNA 8771145 protein-coding Ccdc150 coiled-coil domain containing 150 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 3645202 3720343 - 102018452 AGCD01001771;GBDJ01383196;XM_013512113;XM_013512117;XM_013512120 XP_013367567;XP_013367571;XP_013367574 MODEL 8828714 pseudo LOC102005452 protein kinase C iota type pseudogene NW_004955411 3980164 3982123 - 102005452 AGCD01011566 MODEL 8710746 protein-coding LOC102021642 serpin B9-like NW_004955465 10392685 10403396 - 102021642 AGCD01050508;XM_005398915 XP_005398972 MODEL 39134444 misc_rna 7SK 7SK RNA 9063855 protein-coding Angptl4 angiopoietin like 4 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); PARTICIPATES IN lipid metabolic pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955563 1024163 1030816 - 102013662 AGCD01074105;AGCD01074106;AGCD01074107;GBBH01155465;GBDI01168623;XM_013509151 XP_013364605 MODEL 39133427 misc_rna 7SK 7SK RNA 8968829 protein-coding Abhd15 abhydrolase domain containing 15 INVOLVED IN adipose tissue development (ortholog); lipid catabolic process (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955481 3686900 3691384 + 102010259 AGCD01056913;GBDJ01136395;XM_005402677 XP_005402734 MODEL 8935459 protein-coding Hrc histidine rich calcium binding protein ENCODES a protein that exhibits ATPase binding (ortholog); calcium ion binding (ortholog); calcium ion sequestering activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); negative regulation of calcium ion import into sarcoplasmic reticulum (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH Body Weight (ortholog); Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) NW_004955559 1583661 1587457 + 102023305 AGCD01073652;GBDF01125598;XM_005412905;XM_005412907 XP_005412962;XP_005412964 MODEL 8911057 protein-coding Ca13 carbonic anhydrase 13 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog); myelin sheath (ortholog) NW_004955417 3194961 3219019 + 102003867 AGCD01017907;GBDJ01132278;XM_005381741 XP_005381798 MODEL 8903025 protein-coding Dgkb diacylglycerol kinase beta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extrinsic component of postsynaptic density membrane (ortholog) NW_004955410 17677375 18304409 - 102019368 AGCD01010991;AGCD01010992;AGCD01010993;AGCD01010994;AGCD01010995;AGCD01010996;AGCD01010997;AGCD01010998;AGCD01010999;AGCD01011000;AGCD01011001;AGCD01011002;GBDJ01401747;XM_005377328;XM_013510618;XM_013510619;XM_013510620;XM_013510621;XM_013510623;XM_013510624 XP_005377385;XP_013366072;XP_013366073;XP_013366074;XP_013366075;XP_013366077;XP_013366078 MODEL 8971533 protein-coding Cntn5 contactin 5 INVOLVED IN presynapse assembly (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); epilepsy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynaptic membrane (ortholog) NW_004955412 3105095 4122484 + 102006438 AGCD01012565;AGCD01012566;AGCD01012567;AGCD01012568;AGCD01012569;AGCD01012570;AGCD01012571;AGCD01012572;AGCD01012573;AGCD01012574;AGCD01012575;AGCD01012576;AGCD01012577;AGCD01012578;AGCD01012579;AGCD01012580;AGCD01012581;AGCD01012582;AGCD01012583;AGCD01012584;AGCD01012585;AGCD01012586;AGCD01012587;AGCD01012588;AGCD01012589;AGCD01012590;AGCD01012591;AGCD01012592;GBDF01153679;XM_005377960 XP_005378017 MODEL 8908379 protein-coding Gcat glycine C-acetyltransferase PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955413 24184997 24192178 + 102011102 AGCD01014355;GBDJ01317225;XM_005379228 XP_005379285 MODEL 9054309 protein-coding Elp6 elongator acetyltransferase complex subunit 6 INVOLVED IN apoptotic process (ortholog); autophagosome maturation (ortholog); autophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955420 24795416 24807790 + 102013177 AGCD01021332;AGCD01021333;GBDF01253292;XM_005383396;XM_005383397;XM_005383398;XM_005383399 XP_005383453;XP_005383454;XP_005383455;XP_005383456 MODEL 8965912 protein-coding LOC102008396 apolipoprotein L6-like NW_004955413 21987513 22022979 + 102008396 AGCD01014278;AGCD01014279;GBDF01146804;XM_013511275 XP_013366729 MODEL 8705101 protein-coding LOC102011438 octapeptide-repeat protein T2-like NW_004955414 22365294 22365779 - 102011438 AGCD01015455;XM_005380507 XP_005380564 MODEL 9014299 protein-coding LOC102010296 uncharacterized LOC102010296 NW_004955516 3709709 3720497 + 102010296 AGCD01067503;AGCD01067504;GBCE01103721;XM_005409002 XP_005409059 MODEL 8865878 protein-coding Dync1i2 dynein cytoplasmic 1 intermediate chain 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955449 3204839 3256059 - 102018042 AGCD01041845;AGCD01041846;GBDJ01007532;XM_005393228;XM_005393230;XM_005393231;XM_013518773;XM_013518774 XP_005393285;XP_005393287;XP_005393288;XP_013374227;XP_013374228 MODEL 8854509 protein-coding Trim17 tripartite motif containing 17 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN autophagy (ortholog); protein autoubiquitination (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog) NW_004955581 107251 113907 + 102011712 AGCD01075657;GBDF01052383;XM_005414229;XM_005414230;XM_005414231 XP_005414286;XP_005414287;XP_005414288 MODEL 8747246 protein-coding Efna4 ephrin A4 ENCODES a protein that exhibits ephrin receptor binding (ortholog) NW_004955545 1557107 1561234 + 102024509 AGCD01071859;GBDF01210187;XM_005411567 XP_005411624 MODEL 8831740 protein-coding Ap4e1 adaptor related protein complex 4 subunit epsilon 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congenital disorder of glycosylation Ig (ortholog); FOUND IN AP-4 adaptor complex (ortholog) NW_004955409 3476527 3532683 - 102026401 AGCD01009242;AGCD01009243;AGCD01009244;AGCD01009245;GBBH01198101;GBDJ01422441;XM_013510289 XP_013365743 MODEL 8812642 protein-coding Clec9a C-type lectin domain containing 9A INVOLVED IN positive regulation of cytokine production (ortholog); receptor-mediated endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cell surface (ortholog) NW_004955413 7787663 7808761 - 102009365 AGCD01013831;GBBH01099244;XM_005378940 XP_005378997 MODEL 8845518 pseudo LOC102006532 10 kDa heat shock protein, mitochondrial pseudogene NW_004955451 3071650 3074700 - 102006532 AGCD01043035 MODEL 39134004 misc_rna 7SK 7SK RNA 8804376 protein-coding Akap7 A-kinase anchoring protein 7 ENCODES a protein that exhibits AMP binding (ortholog); protein domain specific binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN action potential (ortholog); cAMP/PKA signal transduction (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955436 11883840 12002668 + 102017601 AGCD01033822;AGCD01033823;AGCD01033824;GBBH01106984;GBCE01089361;XM_013516678 XP_013372132 MODEL 9010183 protein-coding LOC102003706 WAP four-disulfide core domain protein 6A-like NW_004955445 11697127 11701399 + 102003706 AGCD01039713;GBDF01265082;XM_005392421 XP_005392478 MODEL 8989933 pseudo LOC102009138 heterogeneous nuclear ribonucleoprotein M pseudogene NW_004955403 28891551 28908137 - 102009138 AGCD01002352 MODEL 8999574 protein-coding Lhfpl2 LHFPL tetraspan subfamily member 2 INVOLVED IN development of primary female sexual characteristics (ortholog); development of primary male sexual characteristics (ortholog); positive regulation of fertilization (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog) NW_004955425 22398503 22556667 + 102014585 AGCD01025820;AGCD01025821;AGCD01025822;GBDF01029543;GBDF01277818;XM_005386018;XM_005386019 XP_005386075;XP_005386076 MODEL 8943797 protein-coding Ccnc cyclin C ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN G0 to G1 transition (ortholog); negative regulation of Notch signaling pathway (ortholog); negative regulation of triglyceride metabolic process (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Burns (ortholog); lymphoma (ortholog); FOUND IN CKM complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); mediator complex (ortholog) NW_004955411 25415023 25447874 - 102024776 AGCD01012156;AGCD01012157;AGCD01012158;GBDK01232929;XM_005377807;XM_005377808;XM_005377809 XP_005377864;XP_005377865;XP_005377866 MODEL 8815169 protein-coding Atp1b3 ATPase Na+/K+ transporting subunit beta 3 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN intracellular potassium ion homeostasis (ortholog); intracellular sodium ion homeostasis (ortholog); membrane repolarization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955508 3848745 3875992 - 102016938 AGCD01065839;AGCD01065840;AGCD01065841;AGCD01065842;AGCD01065843;GBDF01224103;XM_005407753;XM_013506258 XP_005407810;XP_013361712 MODEL 8877860 protein-coding Brd7 bromodomain containing 7 ENCODES a protein that exhibits histone binding (ortholog); histone H3K14ac reader activity (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 8425976 8462431 - 102008761 AGCD01031593;AGCD01031594;GBBH01166493;GBCB01024456;XM_013516217 XP_013371671 MODEL 8918170 protein-coding Il17re interleukin 17 receptor E ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955561 1397286 1409999 + 102013018 AGCD01073855;GBDF01255893;XM_005413048;XM_005413049;XM_005413050 XP_005413105;XP_005413106;XP_005413107 MODEL 8816439 protein-coding Fbxo10 F-box protein 10 INVOLVED IN regulation of apoptotic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955419 28915083 28969374 + 102006462 AGCD01020479;AGCD01020480;AGCD01020481;GBDF01194829;XM_005382877 XP_005382934 MODEL 8858887 protein-coding Gcc1 GRIP and coiled-coil domain containing 1 ASSOCIATED WITH cannabis abuse (ortholog); Cocaine-Related Disorders (ortholog); phencyclidine abuse (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) NW_004955479 8636274 8642027 - 102022917 AGCD01056451;GBBH01036831;XM_005402361 XP_005402418 MODEL 8951649 protein-coding Cebpa CCAAT enhancer binding protein alpha ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Acute-Phase Reaction (ortholog); FOUND IN C/EBP complex (ortholog); CHOP-C/EBP complex (ortholog); nuclear matrix (ortholog) NW_004955468 3046544 3049217 - 102019379 AGCD01051849;AGCD01051850;GBBH01092640;XM_013522540 XP_013377994 MODEL 9028639 protein-coding Gpr61 G protein-coupled receptor 61 ENCODES a protein that exhibits arrestin family protein binding (ortholog); INVOLVED IN ligand-independent adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endosome (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) NW_004955435 12929709 12961755 + 102003581 AGCD01033174;AGCD01033175;AGCD01033176;GBBH01078341;XM_005388870;XR_001234859 XP_005388927 MODEL 39131409 protein-coding KCNC3 potassium voltage-gated channel subfamily C member 3 8863969 protein-coding LOC102011051 tetratricopeptide repeat protein 39B-like NW_004955441 6423398 6437402 + 102011051 AGCD01036920;GBDF01008292;XM_005390888 XP_005390945 MODEL 8756732 protein-coding LOC102005453 olfactory receptor 8D1-like NW_004955412 25120340 25121215 - 102005453 AGCD01013135;XM_013511250 XP_013366704 MODEL 8924806 protein-coding Adnp2 ADNP homeobox 2 INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955402 63312588 63346307 + 102029344 AGCD01001669;AGCD01001670;GBDF01156162;XM_005373126;XM_005373127 XP_005373183;XP_005373184 MODEL 9028170 protein-coding Eps8l2 EPS8 signaling adaptor L2 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 106 (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein-containing complex (ortholog) NW_004955476 11371928 11390588 - 102012192 AGCD01055454;AGCD01055455;AGCD01055456;GBBH01063738;GBDI01006668;XM_005401820 XP_005401877 MODEL 39133880 misc_rna 7SK 7SK RNA 8799017 protein-coding LOC102006887 putative olfactory receptor 2W6 NW_004955465 13466321 13483771 + 102006887 AGCD01050609;AGCD01050610;AGCD01050611;GBDF01209454;XM_005399013;XM_013521796 XP_005399070;XP_013377250 MODEL 39132245 rrna 5S_rRNA 5S ribosomal RNA 8877719 protein-coding Cdc23 cell division cycle 23 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); mitotic cell cycle (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955418 2194937 2221928 + 102004163 AGCD01018751;AGCD01018752;AGCD01018753;GBDF01124966;XM_005382120;XM_005382121;XM_005382122 XP_005382177;XP_005382178;XP_005382179 MODEL 8947337 protein-coding Hrg histidine rich glycoprotein ENCODES a protein that exhibits heme binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to fungus (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955420 21020938 21033022 - 102030319 AGCD01021119;GBDI01006649;XM_005383268 XP_005383325 MODEL 8703303 protein-coding Idh2 isocitrate dehydrogenase (NADP(+)) 2 ENCODES a protein that exhibits isocitrate dehydrogenase (NADP+) activity (ortholog); INVOLVED IN NADP+ biosynthetic process (ortholog); negative regulation of glial cell migration (ortholog); negative regulation of glial cell proliferation (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); peroxisome (ortholog) NW_004955416 15197611 15212919 + 102023150 AGCD01017308;AGCD01017309;GBCQ01003629;XM_005381533;XM_005381534 XP_005381590;XP_005381591 MODEL 8865045 protein-coding Actr1a actin related protein 1A INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); spermatogenesis (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH colon cancer (ortholog); Down syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell cortex (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955485 7926744 7944648 + 102015851 AGCD01058680;GBDF01044280;XM_005403835;XM_013504044 XP_005403892;XP_013359498 MODEL 8857539 protein-coding LOC102008036 myelin P2 protein NW_004955444 162419 167955 + 102008036 AGCD01038653;GBBH01135207;XM_005392055 XP_005392112 MODEL 8813664 protein-coding Caprin1 cell cycle associated protein 1 ENCODES a protein that exhibits ATP binding (ortholog); molecular condensate scaffold activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN generation of neurons (ortholog); intracellular mRNA localization (ortholog); membraneless organelle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955422 12126893 12170877 - 102018612 AGCD01022776;AGCD01022777;AGCD01022778;AGCD01022779;GBDF01011002;XM_005384149;XM_005384151 XP_005384206;XP_005384208 MODEL 39132002 rrna 5S_rRNA 5S ribosomal RNA 8911809 pseudo LOC102004041 cofilin-2 pseudogene NW_004955408 16489538 16489996 - 102004041 AGCD01008440 MODEL 8846088 protein-coding Chst15 carbohydrate sulfotransferase 15 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate binding (ortholog); N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity (ortholog); INVOLVED IN hexose biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Lung Neoplasms (ortholog) NW_004955477 2065251 2147565 - 102028294 AGCD01055517;GBDI01354926;XM_005401967;XM_013503071;XM_013503072;XM_013503073;XM_013503074 XP_005402024;XP_013358525;XP_013358526;XP_013358527;XP_013358528 MODEL 8882702 protein-coding Brd8 bromodomain containing 8 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955418 2232853 2275812 + 102005259 AGCD01018753;AGCD01018754;GBCE01097970;XM_005382124;XM_005382125;XM_005382126;XM_005382127;XM_005382128;XM_005382129;XM_005382130;XM_013512994;XM_013512995;XM_013512996;XM_013512997 XP_005382181;XP_005382182;XP_005382183;XP_005382184;XP_005382185;XP_005382186;XP_005382187;XP_013368448;XP_013368449;XP_013368450;XP_013368451 MODEL 8801654 protein-coding Itih1 inter-alpha-trypsin inhibitor heavy chain 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955430 2738128 2751007 + 102025711 AGCD01029180;GBDI01248188;XM_005387351 XP_005387408 MODEL 8880071 protein-coding Ccdc152 coiled-coil domain containing 152 ASSOCIATED WITH basal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955426 26899303 26950428 + 102028441 AGCD01026787;AGCD01026788;AGCD01026789;AGCD01026790;AGCD01026791;GBBH01026408;XM_005386252;XM_005386253 XP_005386309;XP_005386310 MODEL 8794002 protein-coding Elspbp1 epididymal sperm binding protein 1 ASSOCIATED WITH colorectal cancer (ortholog); uterine carcinosarcoma (ortholog) NW_004955609 227424 241987 - 102011266 AGCD01077054;XM_005414929;XM_013510121 XP_005414986;XP_013365575 MODEL 8804473 protein-coding LOC102021647 major allergen I polypeptide chain 2-like NW_004955468 4158537 4170751 - 102021647 AGCD01051893;GBDF01099579;XM_013522294 XP_013377748 MODEL 8984781 protein-coding Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); microtubule-based movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); endocytic vesicle membrane (ortholog) NW_004955620 46535 82595 - 102016219 AGCD01077361;GBDF01045921;XM_005415011;XM_013510152 XP_005415068;XP_013365606 MODEL 8743427 pseudo LOC102004419 acyl-protein thioesterase 1 pseudogene NW_004955535 3723222 3723807 + 102004419 AGCD01070706;XM_005410498 MODEL 8982157 protein-coding Trim2 tripartite motif containing 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955471 7523895 7698436 + 102029852 AGCD01053154;AGCD01053155;AGCD01053156;AGCD01053157;AGCD01053158;AGCD01053159;AGCD01053160;GBCQ01127466;XM_005400911;XM_005400912;XM_005400913;XM_005400914;XM_005400915;XM_005400916;XM_005400917;XM_005400918;XM_005400920;XM_005400921;XM_013522895;XM_013522896 XP_005400968;XP_005400969;XP_005400970;XP_005400971;XP_005400972;XP_005400973;XP_005400974;XP_005400975;XP_005400977;XP_005400978;XP_013378349;XP_013378350 MODEL 8734490 protein-coding Cfap57 cilia and flagella associated protein 57 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium organization (ortholog); single fertilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); male infertility (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) NW_004955537 2799965 2861411 + 102021277 AGCD01070938;AGCD01070939;GBDF01117921;XM_005410633;XM_005410634;XM_005410635;XM_013507773 XP_005410690;XP_005410691;XP_005410692;XP_013363227 MODEL 9062884 ncrna LOC102006535 uncharacterized LOC102006535 NW_004955452 9481411 9485884 + 102006535 AGCD01044238;GBDF01118568;XR_001236068;XR_001236069;XR_001236070;XR_001236071 MODEL 8868008 protein-coding Clgn calmegin ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); protein-containing complex assembly (ortholog); single fertilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Dwarfism (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog) NW_004955428 3359231 3406221 + 102014382 AGCD01027655;AGCD01027656;AGCD01027657;GBDF01010788;XM_005386674;XM_005386675;XM_013515327;XM_013515328 XP_005386731;XP_005386732;XP_013370781;XP_013370782 MODEL 8964818 protein-coding LOC102009139 phosphatidylcholine transfer protein-like NW_004955451 6915885 6945860 - 102009139 AGCD01043218;AGCD01043219;AGCD01043220;GBDK01010809;XM_013519061 XP_013374515 MODEL 8753609 protein-coding Ca14 carbonic anhydrase 14 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955413 510089 516892 - 102018174 AGCD01013472;GBCB01024067;XM_005378696;XM_005378697;XM_013511467 XP_005378753;XP_005378754;XP_013366921 MODEL 9040254 protein-coding LOC102009503 olfactory receptor 2V2 NW_004955483 151790 152737 + 102009503 AGCD01057601;XM_005403270 XP_005403327 MODEL 8872874 protein-coding LOC102012689 keratin, type II cytoskeletal 73 NW_004955547 3011391 3021597 - 102012689 AGCD01072303;GBCB01047840;XM_005411952;XM_005411953 XP_005412009;XP_005412010 MODEL 8707196 pseudo LOC102008404 RNA-binding protein with serine-rich domain 1 pseudogene NW_004955415 22507523 22528364 - 102008404 AGCD01016538;AGCD01016539 MODEL 39134445 misc_rna 7SK 7SK RNA 10121481 protein-coding LOC106149908 translation initiation factor IF-2-like NW_004955457 7661508 7684550 + 106149908 AGCD01046885;GBDF01185661;XM_013520661 XP_013376115 MODEL 8983630 protein-coding LOC102004045 protocadherin Fat 2 NW_004955410 4266352 4360690 + 102004045 AGCD01010661;AGCD01010662;AGCD01010663;AGCD01010664;AGCD01010665;AGCD01010666;GBBH01166136;XM_005377194;XM_005377195;XM_005377196 XP_005377251;XP_005377252;XP_005377253 MODEL 39133442 misc_rna 7SK 7SK RNA 8904491 pseudo LOC102005454 lupus La protein homolog pseudogene NW_004955412 30675648 30678489 + 102005454 AGCD01013305 MODEL 10164058 protein-coding Gpr62 G protein-coupled receptor 62 ENCODES a protein that exhibits arrestin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ligand-independent adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of calcium-mediated signaling (ortholog); FOUND IN endosome (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) NW_004955532 3602642 3603230 + 106147238 AGCD01070288;GBCB01089709;XM_013507618 XP_013363072 MODEL 8949322 protein-coding Angptl5 angiopoietin like 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955412 5236268 5254866 - 102008831 AGCD01012621;AGCD01012622;GBDK01366137;XM_005377966 XP_005378023 MODEL 8940879 ncrna LOC102017575 uncharacterized LOC102017575 NW_004955484 4718134 4736293 - 102017575 AGCD01058230;AGCD01058231;GBDF01021447;XR_263886 MODEL 39133881 misc_rna 7SK 7SK RNA 8981513 protein-coding LOC102003707 vomeronasal type-1 receptor 2-like NW_004955569 1079109 1080002 - 102003707 AGCD01074636;XM_013509364 XP_013364818 MODEL 8968687 protein-coding Dgkd diacylglycerol kinase delta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN diacylglycerol catabolic process (ortholog); diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955453 2740922 2802669 - 102007619 AGCD01044636;AGCD01044637;GBCB01039518;GBCB01111507;XM_013519863;XM_013519864;XM_013519865;XM_013519866;XM_013519867 XP_013375317;XP_013375318;XP_013375319;XP_013375320;XP_013375321 MODEL 8816121 protein-coding Il18 interleukin 18 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-18 receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell population proliferation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); decoy receptor complex (ortholog); extracellular region (ortholog) NW_004955412 13807361 13826007 - 102027829 AGCD01012846;GBCQ01010502;XM_005378111;XM_005378112 XP_005378168;XP_005378169 MODEL 8850729 protein-coding LOC102010298 liver carboxylesterase 1 NW_004955433 13504228 13538598 - 102010298 AGCD01031693;AGCD01031694;AGCD01031695;GBBH01016309;XM_005388336;XM_013516222 XP_005388393;XP_013371676 MODEL 9008281 protein-coding Ccnd1 cyclin D1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell population proliferation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN E-cadherin signaling pathway; G1/S transition pathway; Notch signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cyclin D1-CDK4 complex (ortholog); cyclin D1-CDK6 complex (ortholog) NW_004955422 16449921 16462676 - 102024919 AGCD01022898;GBBH01033468;XM_005384251 XP_005384308 MODEL 8735629 protein-coding Cdc25a cell division cycle 25A ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); G2/M transition of mitotic cell cycle (ortholog); positive regulation of cholangiocyte proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive polycystic kidney disease (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955420 24345002 24361802 + 102004937 AGCD01021298;GBCQ01151056;GBDJ01420570;XM_013513611;XM_013513612;XM_013513613;XM_013513614;XM_013513616;XM_013513617;XM_013513618 XP_013369065;XP_013369066;XP_013369067;XP_013369068;XP_013369070;XP_013369071;XP_013369072 MODEL 8731753 protein-coding Cntn6 contactin 6 INVOLVED IN positive regulation of Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); astigmatism (ortholog); autism spectrum disorder (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); presynapse (ortholog) NW_004955421 11797270 12111353 - 102023483 AGCD01021901;AGCD01021902;AGCD01021903;AGCD01021904;AGCD01021905;AGCD01021906;AGCD01021907;AGCD01021908;GBDF01244193;XM_005383755;XM_005383756 XP_005383812;XP_005383813 MODEL 8811523 protein-coding Cfap58 cilia and flagella associated protein 58 INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); oligoasthenoteratozoospermia (ortholog); FOUND IN centrosome (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955485 6208412 6319367 - 102021881 AGCD01058609;AGCD01058610;AGCD01058611;AGCD01058612;AGCD01058613;AGCD01058614;GBDI01366374;XM_005403772;XM_013504126 XP_005403829;XP_013359580 MODEL 8773035 ncrna LOC102008038 uncharacterized LOC102008038 NW_004955445 9004503 9006160 - 102008038 AGCD01039621;GBBH01065534;XR_262322 MODEL 8786793 protein-coding Actr1b actin related protein 1B ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Duane retraction syndrome (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955470 4328895 4336441 - 102026312 AGCD01052729;GBCB01006391;XM_005400694;XM_013522835;XM_013522837 XP_005400751;XP_013378289;XP_013378291 MODEL 8912044 protein-coding Fbxo11 F-box protein 11 ENCODES a protein that exhibits protein-arginine N-methyltransferase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); positive regulation of protein catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955441 14471283 14495508 - 102018337 AGCD01037208;GBBH01229305;XM_005390992;XM_005390993 XP_005391049;XP_005391050 MODEL 8735017 protein-coding LOC102011439 interferon-inducible GTPase 1-like NW_004955415 3743539 3769145 + 102011439 AGCD01015950;AGCD01015951;AGCD01015952;GBCB01074015;XM_005380561;XM_013512404 XP_005380618;XP_013367858 MODEL 9015618 protein-coding Gcc2 GRIP and coiled-coil domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN Golgi ribbon formation (ortholog); Golgi to plasma membrane protein transport (ortholog); late endosome to Golgi transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); trans-Golgi network (ortholog) NW_004955470 12011606 12053625 + 102007649 AGCD01052917;AGCD01052918;GBBH01118856;GBDF01123288;XM_005400800;XM_013522791;XM_013522792 XP_005400857;XP_013378245;XP_013378246 MODEL 8784056 protein-coding Brd9 bromodomain containing 9 ENCODES a protein that exhibits histone reader activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog) NW_004955504 416145 434132 - 102028991 AGCD01064819;GBCE01000275;XM_005407029;XM_005407030;XM_013505887;XM_013505888;XM_013505889 XP_005407086;XP_005407087;XP_013361341;XP_013361342;XP_013361343 MODEL 9015848 protein-coding Efna5 ephrin A5 ENCODES a protein that exhibits chemorepellent activity (ortholog); ephrin receptor binding (ortholog); neurotrophin TRKB receptor binding (ortholog); INVOLVED IN apoptotic process (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH anencephaly (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); cell periphery (ortholog) NW_004955418 6919270 7188561 + 102021764 AGCD01018883;AGCD01018884;AGCD01018885;GBDJ01318639;XM_005382179 XP_005382236 MODEL 8744595 protein-coding Emb embigin INVOLVED IN cell adhesion (ortholog); plasma membrane lactate transport (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog); synapse (ortholog) NW_004955446 16716677 16757031 + 102028592 AGCD01040349;GBBH01001163;XM_005392729 XP_005392786 MODEL 39134276 misc_rna 7SK 7SK RNA 8919651 protein-coding Eps8l3 EPS8 signaling adaptor L3 ENCODES a protein that exhibits actin filament binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of hair cycle (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); hypotrichosis 5 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 13261730 13277117 - 102011142 AGCD01033199;GBDI01324674;XM_005388899;XM_005388900;XM_005388901 XP_005388956;XP_005388957;XP_005388958 MODEL 8845859 protein-coding Lhfpl3 LHFPL tetraspan subfamily member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955410 9121854 9633760 + 102019149 AGCD01010759;AGCD01010760;AGCD01010761;AGCD01010762;AGCD01010763;AGCD01010764;AGCD01010765;AGCD01010766;AGCD01010767;AGCD01010768;GBCQ01019245;XM_005377238;XM_005377239 XP_005377295;XP_005377296 MODEL 8974702 protein-coding Akap8 A-kinase anchoring protein 8 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cell cycle G2/M phase transition (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to prostaglandin E stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN condensed chromosome (ortholog); cytoplasm (ortholog); female pronucleus (ortholog) NW_004955495 7874655 7893209 + 102008956 AGCD01062170;GBDF01160004;XM_005406082;XM_005406083 XP_005406139;XP_005406140 MODEL 10336166 protein-coding Cebpb CCAAT enhancer binding protein beta ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN forkhead class A signaling pathway; interleukin-3 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); Bacteremia (ortholog); FOUND IN C/EBP complex (ortholog); CHOP-C/EBP complex (ortholog); chromatin (ortholog) NW_004955445 8060432 8061289 - 106149433 AGCD01039557;GBCE01052265;GBDF01277539;XM_013518359 XP_013373813 MODEL 8995112 protein-coding Gpr63 G protein-coupled receptor 63 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955411 22771570 22817906 - 102019152 AGCD01012097;GBCQ01010247;XM_005377788;XM_013510888 XP_005377845;XP_013366342 MODEL 8996948 protein-coding Ap4m1 adaptor related protein complex 4 subunit mu 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); Golgi to endosome transport (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Ataxia (ortholog); FOUND IN AP-4 adaptor complex (ortholog); early endosome (ortholog); trans-Golgi network (ortholog) NW_004955573 759222 763222 - 102030254 AGCD01075004;GBDI01178585;XM_005413751;XM_013509465 XP_005413808;XP_013364919 MODEL 8988308 protein-coding Ca2 carbonic anhydrase 2 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); cyanamide hydratase activity (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); carbon dioxide transport (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcoholic pancreatitis (ortholog); Animal Disease Models (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955417 3388110 3402798 + 102009177 AGCD01017914;GBBH01090608;GBCB01007542;XM_013512866 XP_013368320 MODEL 39132003 rrna 5S_rRNA 5S ribosomal RNA 8856931 protein-coding Caprin2 caprin family member 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955505 4431921 4477434 + 102012880 AGCD01065113;AGCD01065114;GBBH01155285;GBDF01011219;XM_013505958 XP_013361412 MODEL 8885357 protein-coding Ccdc154 coiled-coil domain containing 154 INVOLVED IN bone mineralization involved in bone maturation (ortholog); bone remodeling (ortholog); bone resorption (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive osteopetrosis 1 (ortholog); Breast Cancer, Familial (ortholog) NW_004955442 15792593 15800410 + 102026358 AGCD01037878;GBCE01124883;XM_005391542;XM_005391543;XM_005391544;XM_005391546;XM_005391547;XM_005391548 XP_005391599;XP_005391600;XP_005391601;XP_005391603;XP_005391604;XP_005391605 MODEL 8961551 protein-coding Ado 2-aminoethanethiol dioxygenase ENCODES a protein that exhibits cysteamine dioxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); taurine biosynthetic process (ortholog); PARTICIPATES IN taurine and hypotaurine metabolic pathway; FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955425 16049194 16052275 + 102022832 AGCD01025594;GBBH01005931;XM_005385953 XP_005386010 MODEL 9030372 pseudo LOC102006890 small ubiquitin-related modifier 2 pseudogene NW_004955412 9882267 9886715 + 102006890 AGCD01012749 MODEL 39132247 rrna 5S_rRNA 5S ribosomal RNA 8900029 ncrna LOC102011056 uncharacterized LOC102011056 NW_004955443 9637905 9651098 + 102011056 AGCD01038358;GBDF01014410;XR_262200;XR_262201 MODEL 8742745 ncrna LOC102004424 uncharacterized LOC102004424 NW_004955438 15400685 15404077 + 102004424 AGCD01035366;GBDF01187415;XR_261938 MODEL 9046024 protein-coding Trim21 tripartite motif containing 21 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of innate immune response (ortholog); negative regulation of protein deubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleus (ortholog) NW_004955414 20066109 20077331 - 102014130 AGCD01015355;GBCQ01032815;XM_005380044;XM_005380045;XR_001233160 XP_005380101;XP_005380102 MODEL 8745766 protein-coding Kcnc3 potassium voltage-gated channel subfamily C member 3 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog); INVOLVED IN corpus callosum development (ortholog); cortical actin cytoskeleton organization (ortholog); optic nerve development (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); brachydactyly (ortholog); FOUND IN axolemma (ortholog); axon terminus (ortholog); calyx of Held (ortholog) NW_004955559 782842 795455 + 102021715 AGCD01073612;GBDK01321009;GBDK01321020;XM_013509065 XP_013364519 MODEL 9036422 protein-coding Angptl6 angiopoietin like 6 ASSOCIATED WITH COVID-19 (ortholog); gestational diabetes (ortholog); hepatocellular carcinoma (ortholog); FOUND IN secretory granule (ortholog) NW_004955495 1437024 1446328 - 102026544 AGCD01061691;AGCD01061692;GBBH01135211;GBDF01122182;XM_013505314;XM_013505315 XP_013360768;XP_013360769 MODEL 8960193 protein-coding LOC102021649 olfactory receptor 52J3-like NW_004955414 20580283 20581221 - 102021649 AGCD01015380;XM_005380062 XP_005380119 MODEL 8874762 protein-coding Hrh1 histamine receptor H1 ENCODES a protein that exhibits histamine binding (ortholog); histamine receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chemical synaptic transmission (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955429 14022332 14069931 + 102014695 AGCD01028773;AGCD01028774;AGCD01028775;GBCE01180548;XM_005387006;XM_005387007;XM_013515345 XP_005387063;XP_005387064;XP_013370799 MODEL 8946419 protein-coding LOC102009144 complement receptor type 1 NW_004955406 42927757 42997196 + 102009144 AGCD01006720;AGCD01006721;AGCD01006722;AGCD01006723;GBBH01063618;GBCE01049944;XM_013503302 XP_013358756 MODEL 8750965 protein-coding Il18bp interleukin 18 binding protein ENCODES a protein that exhibits interleukin-18 binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to tumor necrosis factor (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); allergic contact dermatitis (ortholog); arteriosclerosis (ortholog); FOUND IN decoy receptor complex (ortholog); extracellular region (ortholog) NW_004955414 19327828 19332577 - 102006332 AGCD01015312;GBDI01016320;XM_005380020;XM_005380021;XM_005380022 XP_005380077;XP_005380078;XP_005380079 MODEL 8751759 pseudo LOC102012691 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955551 615007 616795 + 102012691 AGCD01072666 MODEL 39132004 rrna 5S_rRNA 5S ribosomal RNA 9066639 protein-coding Abhd16a abhydrolase domain containing 16A, phospholipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN monoacylglycerol catabolic process (ortholog); phosphatidylserine catabolic process (ortholog); prostaglandin catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog) NW_004955437 227407 241702 - 102020953 AGCD01034111;AGCD01034112;GBDI01070349;XM_005389356;XM_005389357;XM_013516848;XM_013516849;XM_013516850 XP_005389413;XP_005389414;XP_013372302;XP_013372303;XP_013372304 MODEL 8748194 ncrna LOC102008409 uncharacterized LOC102008409 NW_004955477 11222230 11223234 + 102008409 AGCD01055725;GBBH01224847;XR_263677 MODEL 8700157 protein-coding Brdt bromodomain testis associated ENCODES a protein that exhibits histone binding (ortholog); histone H4 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH azoospermia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955423 2434146 2498523 - 102027081 AGCD01023473;AGCD01023474;AGCD01023475;AGCD01023476;AGCD01023477;GBDF01048977;XM_005385061;XM_013514358;XM_013514359 XP_005385118;XP_013369812;XP_013369813 MODEL 39134005 misc_rna 7SK 7SK RNA 8988137 pseudo LOC102004058 olfactory receptor 51I1-like NW_004955414 21304994 21305922 + 102004058 AGCD01015412 MODEL 39133444 misc_rna 7SK 7SK RNA 8954275 ncrna LOC102005457 uncharacterized LOC102005457 NW_004955413 21113074 21147758 + 102005457 AGCD01014246;AGCD01014247;GBBH01122379;XR_001232964;XR_001232965;XR_001232966 MODEL 8789766 protein-coding LOC102006540 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like NW_004955406 38984291 38988524 - 102006540 AGCD01006616;AGCD01006617;GBDF01005693;GBDK01309458;XM_013503363 XP_013358817 MODEL 39133882 misc_rna 7SK 7SK RNA 9059877 protein-coding LOC102003708 UDP-glucuronosyltransferase 2B20-like NW_004955447 4180631 4374845 - 102003708 AGCD01040708;AGCD01040709;AGCD01040710;AGCD01040711;AGCD01040712;AGCD01040713;AGCD01040714;AGCD01040715;GBDF01017425;XM_005392805;XM_005392807;XM_005392808 XP_005392862;XP_005392864;XP_005392865 MODEL 8985416 protein-coding Akap8l A-kinase anchoring protein 8 like ENCODES a protein that exhibits histone deacetylase binding (ortholog); lamin binding (ortholog); INVOLVED IN cell cycle G2/M phase transition (ortholog); mitotic chromosome condensation (ortholog); mRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955495 7839339 7874432 + 102008432 AGCD01062169;AGCD01062170;GBDF01004787;XM_005406080;XM_005406081 XP_005406137;XP_005406138 MODEL 9056455 protein-coding Dgke diacylglycerol kinase epsilon ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); atypical hemolytic-uremic syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955451 5966773 5988004 - 102013367 AGCD01043194;GBDF01052985;GBDF01154242;XM_005394069 XP_005394126 MODEL 8851458 protein-coding Atp1b4 ATPase Na+/K+ transporting family member beta 4 INVOLVED IN regulation of DNA-templated transcription (ortholog); transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) NW_004955572 1507290 1524359 - 102005526 AGCD01074954;GBDI01089270;XM_005413663;XM_005413664;XM_005413665;XM_013509443 XP_005413720;XP_005413721;XP_005413722;XP_013364897 MODEL 8799841 protein-coding Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ENCODES a protein that exhibits isocitrate dehydrogenase (NAD+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); fundus dystrophy (ortholog); osteoarthritis (ortholog); FOUND IN isocitrate dehydrogenase complex (NAD+) (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955450 685905 703593 + 102007832 AGCD01042342;AGCD01042343;GBDF01081591;XM_005393440 XP_005393497 MODEL 9036916 protein-coding Chst2 carbohydrate sulfotransferase 2 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955508 2821724 2824926 - 102010290 AGCD01065797;GBDF01015115;GBDK01277980;XM_005407731 XP_005407788 MODEL 8777367 protein-coding Cebpd CCAAT enhancer binding protein delta ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner ear development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955454 7711010 7711680 - 102029150 AGCD01045302;GBBH01000020;GBDJ01001327;XM_005396117 XP_005396174 MODEL 8707874 ncrna LOC102010301 uncharacterized LOC102010301 NW_004955524 791217 792333 + 102010301 AGCD01068708;GBDF01013580;XR_001231946 MODEL 9044945 protein-coding Gpr65 G protein-coupled receptor 65 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to acidic pH (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); ulcerative colitis (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) NW_004955438 10724069 10730868 + 102004423 AGCD01035216;GBDI01162205;XM_005390250 XP_005390307 MODEL 9000382 protein-coding Cntnap1 contactin associated protein 1 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN axonogenesis (ortholog); central nervous system myelination (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); paranode region of axon (ortholog) NW_004955451 16535924 16547800 + 102021618 AGCD01043689;GBCB01097905;XM_005394470 XP_005394527 MODEL 8967359 protein-coding Itih2 inter-alpha-trypsin inhibitor heavy chain 2 ENCODES a protein that exhibits hyaluronic acid binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955421 24149081 24189810 + 102008003 AGCD01022208;AGCD01022209;GBDF01081930;XM_005383873;XM_005383874 XP_005383930;XP_005383931 MODEL 8838901 pseudo LOC102008040 very-long-chain 3-oxoacyl-CoA reductase pseudogene NW_004955572 223774 282157 + 102008040 AGCD01074901;AGCD01074902;AGCD01074903;AGCD01074904;AGCD01074905;AGCD01074906 MODEL 8833003 ncrna LOC102011440 uncharacterized LOC102011440 NW_004955476 3980903 3992756 - 102011440 AGCD01055264;GBDF01249578;XR_263619 MODEL 39132005 rrna 5S_rRNA 5S ribosomal RNA 9049584 pseudo LOC102008412 transmembrane protein 208 pseudogene NW_004955417 13153802 13154322 + 102008412 AGCD01018172 MODEL 8888443 protein-coding Gcdh glutaryl-CoA dehydrogenase ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); flavin adenine dinucleotide binding (ortholog); glutaryl-CoA dehydrogenase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955415 31952400 31958067 + 102025456 AGCD01016704;GBDI01005012;XM_005381040 XP_005381097 MODEL 8848473 protein-coding Caps calcyphosine INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog) NW_004955495 3549455 3550965 - 102019612 AGCD01061862;GBCE01003994;XM_005405741 XP_005405798 MODEL 8717809 protein-coding LOC102009512 aldehyde dehydrogenase family 3 member B2-like NW_004955422 17841051 17848453 + 102009512 AGCD01022932;GBDK01152699;XM_005384296 XP_005384353 MODEL 9032342 protein-coding Clhc1 clathrin heavy chain linker domain containing 1 ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog) NW_004955424 27825865 27923223 + 102010177 AGCD01025131;AGCD01025132;AGCD01025133;AGCD01025134;AGCD01025135;AGCD01025136;AGCD01025137;AGCD01025138;AGCD01025139;AGCD01025140;AGCD01025141;AGCD01025142;GBBH01106727;GBDF01086525;XM_005385783 XP_005385840 MODEL 8894359 protein-coding Lhfpl4 LHFPL tetraspan subfamily member 4 ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid receptor clustering (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of inhibitory synapse assembly (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); inhibitory synapse (ortholog); postsynaptic membrane (ortholog) NW_004955561 1066799 1142099 - 102004126 AGCD01073829;AGCD01073830;AGCD01073831;AGCD01073832;AGCD01073833;AGCD01073834;AGCD01073835;AGCD01073836;GBDJ01123683;XM_005413016 XP_005413073 MODEL 8912430 protein-coding Cdc25b cell division cycle 25B ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN female meiosis I (ortholog); oocyte maturation (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955415 14637295 14647181 + 102030415 AGCD01016302;GBDI01072268;XM_013512285 XP_013367739 MODEL 9007944 ncrna LOC102017577 uncharacterized LOC102017577 NW_004955421 601934 608748 - 102017577 AGCD01021568;GBDF01217090;XR_001233853 MODEL 8719051 protein-coding Ca3 carbonic anhydrase 3 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); nickel cation binding (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); cellular response to leptin stimulus (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); Binge Drinking (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955417 3362091 3372270 + 102004705 AGCD01017912;GBDF01125791;XM_005381744;XM_013512802;XM_013512803;XM_013512804 XP_005381801;XP_013368256;XP_013368257;XP_013368258 MODEL 10226362 protein-coding LOC106149910 uncharacterized LOC106149910 NW_004955457 10351685 10352493 - 106149910 AGCD01046954;GBCQ01113664;XM_013520666 XP_013376120 MODEL 8977115 protein-coding Cfap61 cilia and flagella associated protein 61 INVOLVED IN flagellated sperm motility (ortholog); sperm flagellum assembly (ortholog); sperm mitochondrial sheath assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axoneme (ortholog); manchette (ortholog); radial spoke stalk (ortholog) NW_004955415 28171364 28389356 + 102021436 AGCD01016638;AGCD01016639;AGCD01016640;GBDF01048452;XM_013512185;XM_013512186;XM_013512187;XM_013512188 XP_013367639;XP_013367640;XP_013367641;XP_013367642 MODEL 8921196 protein-coding Ccnd2 cyclin D2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); astigmatism (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cyclin D2-CDK4 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955413 2083351 2108450 + 102028624 AGCD01013539;GBDK01142160;XM_005378726 XP_005378783 MODEL 9062219 pseudo LOC102009153 stereocilin-like NW_004955409 22950828 22960330 - 102009153 AGCD01010048;AGCD01010049 MODEL 8814261 protein-coding Fbxo15 F-box protein 15 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) NW_004955402 57524726 57586198 - 102009785 AGCD01001500;AGCD01001501;GBDF01122261;XM_005373067;XM_005373069;XM_005373071;XM_005373072;XM_005373073;XM_005373074;XM_013511393 XP_005373124;XP_005373126;XP_005373128;XP_005373129;XP_005373130;XP_005373131;XP_013366847 MODEL 9055077 protein-coding Ap4s1 adaptor related protein complex 4 subunit sigma 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN AP-4 adaptor complex (ortholog) NW_004955409 29482820 29530691 - 102014651 AGCD01010268;AGCD01010269;AGCD01010270;AGCD01010271;AGCD01010272;AGCD01010273;AGCD01010274;AGCD01010275;AGCD01010276;GBBH01057360;GBCB01041496;XM_013510385 XP_013365839 MODEL 10309212 protein-coding Abhd16b abhydrolase domain containing 16B ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955528 391749 395181 - 106146221 AGCD01069526;GBDF01083654;XM_013507489 XP_013362943 MODEL 8848448 protein-coding Ccdc157 coiled-coil domain containing 157 ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); sarcoma (ortholog) NW_004955455 4601941 4616385 + 102019138 AGCD01045681;GBCE01141676;XM_005396253;XM_005396254;XM_005396255;XM_005396256;XM_005396257 XP_005396310;XP_005396311;XP_005396312;XP_005396313;XP_005396314 MODEL 39134006 misc_rna 7SK 7SK RNA 39134277 misc_rna 7SK 7SK RNA 8994818 protein-coding Epsti1 epithelial stromal interaction 1 INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955518 790815 919869 - 102004964 AGCD01067745;AGCD01067746;AGCD01067747;AGCD01067748;AGCD01067749;GBDI01325591;XM_005409056;XM_013506970;XM_013506971 XP_005409113;XP_013362424;XP_013362425 MODEL 8782723 ncrna LOC102006893 uncharacterized LOC102006893 NW_004955468 7026096 7045290 - 102006893 AGCD01051993;AGCD01051994;GBCE01020831;XR_001236952;XR_263395 MODEL 39132248 rrna 5S_rRNA 5S ribosomal RNA 9055009 pseudo LOC102011060 MICOS complex subunit MIC27 pseudogene NW_004955444 6968368 6969142 - 102011060 AGCD01038884 MODEL 8975539 protein-coding Kcnc4 potassium voltage-gated channel subfamily C member 4 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN axon development (ortholog); cerebral cortex development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); Hyperalgesia (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); calyx of Held (ortholog) NW_004955435 13728272 13750420 + 102016413 AGCD01033210;AGCD01033211;GBCB01000104;XM_005388914;XM_005388916;XM_005388917 XP_005388971;XP_005388973;XP_005388974 MODEL 9028704 protein-coding LOC102005458 zinc finger protein 793 NW_004955468 1948677 2003834 + 102005458 AGCD01051789;AGCD01051790;AGCD01051791;AGCD01051792;AGCD01051793;GBDF01306191;XM_005399907;XM_005399908;XM_005399911;XM_013522326;XM_013522327;XM_013522328 XP_005399964;XP_005399965;XP_005399968;XP_013377780;XP_013377781;XP_013377782 MODEL 9010588 pseudo LOC102021653 protein TEX261 pseudogene NW_004955473 37362 38419 + 102021653 AGCD01053831 MODEL 8727393 protein-coding Caps2 calcyphosine 2 INVOLVED IN brain-derived neurotrophic factor receptor signaling pathway (ortholog); cerebellum development (ortholog); dendrite development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN parallel fiber (ortholog); secretory vesicle (ortholog) NW_004955405 14658335 14761708 - 102008053 AGCD01004931;AGCD01004932;AGCD01004933;GBDI01163209;XM_005374329;XM_005374330;XM_005374331;XM_005374332;XM_013517679;XM_013517680;XM_013517683;XM_013517685;XM_013517689 XP_005374386;XP_005374387;XP_005374388;XP_005374389;XP_013373133;XP_013373134;XP_013373137;XP_013373139;XP_013373143 MODEL 8734899 protein-coding Hrh2 histamine receptor H2 ENCODES a protein that exhibits heterocyclic compound binding (ortholog); histamine receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); digestive tract development (ortholog); epithelial cell morphogenesis (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; cimetidine pharmacokinetics pathway; esomeprazole pharmacodynamics pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); colorectal cancer (ortholog); congestive heart failure (ortholog) NW_004955408 28186316 28225146 + 102006878 AGCD01008709;GBBH01131430;XM_005376363;XM_013509466;XR_259722 XP_005376420;XP_013364920 MODEL 8973871 protein-coding Actr2 actin related protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal protein binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); associative learning (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cap (ortholog); Arp2/3 protein complex (ortholog); cell cortex (ortholog) NW_004955424 19293949 19333170 - 102003465 AGCD01024814;AGCD01024815;GBDK01029184;XM_005385690;XM_005385691 XP_005385747;XP_005385748 MODEL 8924667 protein-coding Il18r1 interleukin 18 receptor 1 ENCODES a protein that exhibits interleukin-18 binding (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN interleukin-18-mediated signaling pathway (ortholog); natural killer cell activation (ortholog); negative regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN interleukin-18 receptor complex (ortholog); membrane (ortholog) NW_004955470 7854995 7887810 + 102020793 AGCD01052814;AGCD01052815;GBBH01123228;XM_005400769;XM_005400770;XM_013522841 XP_005400826;XP_005400827;XP_013378295 MODEL 8960410 ncrna LOC102008041 uncharacterized LOC102008041 NW_004955402 703396 705592 + 102008041 AGCD01000030;GBCE01120029;XR_001233535 MODEL 8782942 protein-coding Efnb1 ephrin B1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); embryonic pattern specification (ortholog); nervous system development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cholangiocarcinoma (ortholog); craniofrontonasal syndrome (ortholog); craniosynostosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955475 8360504 8372431 + 102015627 AGCD01055040;GBCQ01070936;XM_005401594 XP_005401651 MODEL 8738542 pseudo LOC102012693 splicing factor, proline- and glutamine-rich pseudogene NW_004955442 15809374 15820619 - 102012693 AGCD01037879;XR_262171 MODEL 8940806 protein-coding Emc1 ER membrane protein complex subunit 1 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955527 19069 45951 + 102014484 AGCD01069371;AGCD01069372;GBDF01001898;XM_005409788;XM_005409789 XP_005409845;XP_005409846 MODEL 8853253 ncrna LOC102003710 uncharacterized LOC102003710 NW_004955575 880017 890569 + 102003710 AGCD01075230;GBDF01020002;XR_265070 MODEL 8749915 protein-coding Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); centrosome localization (ortholog); microtubule cytoskeleton organization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); kinetochore (ortholog) NW_004955433 23262981 23286506 - 102022530 AGCD01031956;GBDF01090277;XM_005388471;XM_013516193;XM_013516194 XP_005388528;XP_013371647;XP_013371648 MODEL 8817818 protein-coding LOC102004059 olfactory receptor 2D3-like NW_004955414 22615797 22616720 - 102004059 AGCD01015466;XM_005380178 XP_005380235 MODEL 39133448 misc_rna 7SK 7SK RNA 8737717 protein-coding Trim23 tripartite motif containing 23 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); positive regulation of protein modification process (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi membrane (ortholog); lysosomal membrane (ortholog) NW_004955446 3480177 3509050 + 102019968 AGCD01040020;AGCD01040021;AGCD01040022;GBDJ01063114;XM_005392627 XP_005392684 MODEL 8771358 pseudo LOC102006542 insulin-like growth factor 2 mRNA-binding protein 2 NW_004955407 20470335 20479986 - 102006542 AGCD01007330 MODEL 8933203 protein-coding Angptl7 angiopoietin like 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of vasculature development involved in avascular cornea development in camera-type eye (ortholog); regulation of extracellular matrix organization (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 2539781 2545630 - 102011011 AGCD01058999;GBCB01111542;XM_005404003 XP_005404060 MODEL 8724552 pseudo LOC102004427 KATNB1-like protein 1 NW_004955553 1440942 1443862 - 102004427 AGCD01072882 MODEL 8801248 pseudo LOC102010302 glutathione S-transferase Mu 1-like NW_004955435 13225086 13240501 + 102010302 AGCD01033197;AGCD01033198;AGCD01033199 MODEL 8980737 protein-coding Dgkg diacylglycerol kinase gamma ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); familial hypercholesterolemia (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955420 21296515 21481651 + 102007235 AGCD01021134;AGCD01021135;AGCD01021136;AGCD01021137;AGCD01021138;GBBH01017583;XM_005383282;XM_005383283;XM_005383284 XP_005383339;XP_005383340;XP_005383341 MODEL 8740112 pseudo LOC102017578 non-histone chromosomal protein HMG-14 pseudogene NW_004955487 651945 652237 + 102017578 AGCD01059224 MODEL 8958151 protein-coding Gpr68 G protein-coupled receptor 68 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to acidic pH (ortholog); cellular response to pH (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta type 2A6 (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955438 13553770 13575093 - 102017506 AGCD01035292;AGCD01035293;AGCD01035294;GBCE01179739;XM_005390296;XM_005390297;XM_005390298;XM_005390300;XM_005390301;XM_005390303;XM_013517223;XM_013517224 XP_005390353;XP_005390354;XP_005390355;XP_005390357;XP_005390358;XP_005390360;XP_013372677;XP_013372678 MODEL 8998908 protein-coding Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH cervical cancer (ortholog); Disease Progression (ortholog); fundus dystrophy (ortholog); FOUND IN isocitrate dehydrogenase complex (NAD+) (ortholog); mitochondrion (ortholog) NW_004955415 13642804 13649023 - 102016262 AGCD01016263;GBCB01001615;XM_013512289;XM_013512290;XR_001233226;XR_001233227 XP_013367743;XP_013367744 MODEL 8939119 protein-coding Itih3 inter-alpha-trypsin inhibitor heavy chain 3 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955430 2753974 2767436 + 102026030 AGCD01029180;GBDF01106227;XM_005387352 XP_005387409 MODEL 39132006 rrna 5S_rRNA 5S ribosomal RNA 8978905 protein-coding Akap9 A-kinase anchoring protein 9 ENCODES a protein that exhibits molecular adaptor activity (ortholog); potassium channel activator activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); maintenance of centrosome location (ortholog); microtubule nucleation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH amyloidosis (ortholog); Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); FOUND IN 9+2 motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955432 8933037 9090872 + 102025829 AGCD01030891;AGCD01030892;GBDJ01000790;XM_005388001;XM_013515942;XM_013515943;XM_013515944;XM_013515945;XM_013515946;XM_013515947 XP_005388058;XP_013371396;XP_013371397;XP_013371398;XP_013371399;XP_013371400;XP_013371401 MODEL 8866336 ncrna LOC102008048 uncharacterized LOC102008048 NW_004955403 45870106 45876316 - 102008048 AGCD01002838;GBDJ01116277;XR_259242 MODEL 8752892 pseudo LOC102008417 serine/threonine-protein kinase Chk1 pseudogene NW_004955484 9066985 9070701 + 102008417 AGCD01058404 MODEL 9045305 protein-coding Gcfc2 GC-rich sequence DNA-binding factor 2 INVOLVED IN spliceosomal complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 10174291 10202201 + 102015216 AGCD01024507;AGCD01024508;GBDF01307374;XM_005385461;XM_013514701 XP_005385518;XP_013370155 MODEL 39133883 misc_rna 7SK 7SK RNA 8791544 protein-coding Clic1 chloride intracellular channel 1 ENCODES a protein that exhibits chloride channel activity (ortholog); glutathione dehydrogenase (ascorbate) activity (ortholog); INVOLVED IN chloride transport (ortholog); platelet aggregation (ortholog); positive regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955437 269276 275949 - 102028231 AGCD01034115;GBBH01003865;XM_005389385 XP_005389442 MODEL 9025237 protein-coding LOC102011061 olfactory receptor 7G2-like NW_004955563 307152 309101 - 102011061 AGCD01074060;XM_013509132;XM_013509133 XP_013364586;XP_013364587 MODEL 39132249 rrna 5S_rRNA 5S ribosomal RNA 8817094 protein-coding Epx eosinophil peroxidase ENCODES a protein that exhibits lactoperoxidase activity (ortholog); peroxidase activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); defense response to nematode (ortholog); eosinophil migration (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Eosinophilic Asthma (ortholog) NW_004955451 4818809 4828913 - 102029463 AGCD01043142;GBBH01198007;XM_005394034;XM_005394035 XP_005394091;XP_005394092 MODEL 8946791 protein-coding Chst3 carbohydrate sulfotransferase 3 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); keratan sulfotransferase activity (ortholog); proteoglycan sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); peripheral nervous system axon regeneration (ortholog); response to axon injury (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Hip Dislocation (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955437 19563645 19605747 - 102003587 AGCD01034858;AGCD01034859;AGCD01034860;GBBH01057404;GBCE01122963;XM_005390020 XP_005390077 MODEL 8999840 protein-coding Cebpe CCAAT enhancer binding protein epsilon ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); granulocyte differentiation (ortholog); macrophage differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute promyelocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955409 37186282 37187914 + 102023985 AGCD01010498;GBBH01045736;XM_005377089 XP_005377146 MODEL 8872468 protein-coding Cntnap2 contactin associated protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); PDZ domain binding (ortholog); protease binding (ortholog); INVOLVED IN action potential initiation (ortholog); adult behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); articulation disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); axon initial segment (ortholog) NW_004955491 1983002 3982510 + 102026533 AGCD01060367;AGCD01060368;AGCD01060369;AGCD01060370;AGCD01060371;AGCD01060372;AGCD01060373;AGCD01060374;AGCD01060375;AGCD01060376;AGCD01060377;AGCD01060378;AGCD01060379;AGCD01060380;AGCD01060381;AGCD01060382;AGCD01060383;AGCD01060384;AGCD01060385;AGCD01060386;AGCD01060387;AGCD01060388;AGCD01060389;AGCD01060390;AGCD01060391;AGCD01060392;AGCD01060393;AGCD01060394;AGCD01060395;AGCD01060396;AGCD01060397;AGCD01060398;AGCD01060399;AGCD01060400;AGCD01060401;AGCD01060402;AGCD01060403;AGCD01060404;AGCD01060405;AGCD01060406;AGCD01060407;AGCD01060408;AGCD01060409;AGCD01060410;AGCD01060411;GBDF01230674;XM_005404887 XP_005404944 MODEL 8915934 protein-coding Atp23 ATP23 metallopeptidase and ATP synthase assembly factor homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955458 5632679 5650270 + 102003948 AGCD01047515;AGCD01047516;AGCD01047517;AGCD01047518;AGCD01047519;GBCB01041142;GBDJ01389434;XM_013521026 XP_013376480 MODEL 8761316 protein-coding LOC102009160 putative olfactory receptor 2W6 NW_004955465 13945042 13945998 - 102009160 AGCD01050638;XM_005399018 XP_005399075 MODEL 8857094 protein-coding Ccnd3 cyclin D3 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); hyaluronan biosynthetic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); cervix carcinoma (ortholog); FOUND IN cyclin D3-CDK4 complex (ortholog); cyclin D3-CDK6 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955437 8266523 8273855 - 102019529 AGCD01034483;GBDF01126906;GBDI01000235;XM_013516782;XM_013516783 XP_013372236;XP_013372237 MODEL 8728904 protein-coding Adora1 adenosine A1 receptor ENCODES a protein that exhibits G protein-coupled adenosine receptor activity (ortholog); G protein-coupled receptor binding (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN response to auditory stimulus; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cognition (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); Bradycardia (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN asymmetric synapse (ortholog); axolemma (ortholog); basolateral plasma membrane (ortholog) NW_004955406 39148811 39183577 + 102009685 AGCD01006621;GBDJ01197471;XM_013522558;XM_013522560;XM_013522562;XM_013522567;XM_013522569;XM_013522572;XM_013522574 XP_013378012;XP_013378014;XP_013378016;XP_013378021;XP_013378023;XP_013378026;XP_013378028 MODEL 8748328 pseudo LOC102017579 elongation factor 1-beta-like NW_004955489 9292062 9293395 + 102017579 AGCD01060035 MODEL 8835247 protein-coding Ca4 carbonic anhydrase 4 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); response to steroid hormone (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Colonic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955451 1485939 1493249 + 102006970 AGCD01042971;AGCD01042972;GBDI01293079;XM_005393960 XP_005394017 MODEL 8967727 protein-coding Cfap65 cilia and flagella associated protein 65 INVOLVED IN acrosome assembly (ortholog); cilium movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebrotendinous xanthomatosis (ortholog); colon adenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal central apparatus (ortholog); cytoplasm (ortholog) NW_004955453 14394853 14431774 + 102024756 AGCD01044864;GBDK01088182;XM_005395597;XM_005395609;XM_005395610;XM_013519777;XM_013519778;XM_013519779;XM_013519780;XM_013519781;XM_013519782;XM_013519783;XM_013519784;XM_013519785;XM_013519786 XP_005395654;XP_005395666;XP_005395667;XP_013375231;XP_013375232;XP_013375233;XP_013375234;XP_013375235;XP_013375236;XP_013375237;XP_013375238;XP_013375239;XP_013375240 MODEL 8902302 protein-coding LOC102009513 40S ribosomal protein S27-like NW_004955422 18850193 18850985 - 102009513 AGCD01022964;GBCQ01146185;XM_005384396 XP_005384453 MODEL 8719625 protein-coding Ap5b1 adaptor related protein complex 5 subunit beta 1 INVOLVED IN endosomal transport (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); macular degeneration (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog) NW_004955422 19544255 19547212 + 102028981 AGCD01023018;GBCE01085788;GBDK01317435;XM_005384462 XP_005384519 MODEL 8775197 protein-coding Ccdc158 coiled-coil domain containing 158 ENCODES a protein that exhibits clathrin binding (ortholog); INVOLVED IN receptor-mediated endocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog) NW_004955433 1040193 1120585 - 102013962 AGCD01031344;AGCD01031345;AGCD01031346;AGCD01031347;GBCB01099837;XM_013516286 XP_013371740 MODEL 39134007 misc_rna 7SK 7SK RNA 8999109 protein-coding Abhd17a abhydrolase domain containing 17A, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); negative regulation of protein localization to microtubule (ortholog); negative regulation of skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endosome membrane (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955495 6159314 6167429 + 102025024 AGCD01062055;GBDI01062611;XM_005405944;XM_013505273 XP_005406001;XP_013360727 MODEL 8963910 protein-coding Brf1 BRF1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of mRNA stability (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog) NW_004955538 3469322 3544704 - 102005507 AGCD01071164;AGCD01071165;AGCD01071166;AGCD01071167;AGCD01071168;AGCD01071169;GBCB01026253;GBDI01136185;XM_005410860 XP_005410917 MODEL 39134278 misc_rna 7SK 7SK RNA 39133459 misc_rna 7SK 7SK RNA 9015181 protein-coding Lhfpl5 LHFPL tetraspan subfamily member 5 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 67 (ortholog); Deafness (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); stereocilium bundle (ortholog) NW_004955437 3644448 3650688 + 102013214 AGCD01034330;XM_013516732 XP_013372186 MODEL 8822599 ncrna LOC102011444 uncharacterized LOC102011444 NW_004955417 7040994 7068069 - 102011444 AGCD01017997;GBDF01260563;XR_260460 MODEL 8888817 protein-coding Capsl calcyphosine like INVOLVED IN angiogenesis (ortholog); endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); exudative vitreoretinopathy (ortholog) NW_004955426 20833508 20862356 - 102010285 AGCD01026575;GBCE01097061;XM_005386203;XM_013515010 XP_005386260;XP_013370464 MODEL 9040895 protein-coding LOC102005462 chromosome unknown open reading frame, human C19orf53 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955415 32590287 32592465 + 102005462 AGCD01016726;GBDI01013906;XM_005381066 XP_005381123 MODEL 8762947 protein-coding Fbxo16 F-box protein 16 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955403 50835073 50887523 - 102014201 AGCD01002974;AGCD01002975;AGCD01002976;AGCD01002977;GBDI01053534;XM_005373773;XM_005373775;XR_001234024 XP_005373830;XP_005373832 MODEL 9043370 protein-coding Il18rap interleukin 18 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); Bronchial Hyperreactivity (ortholog); hepatocellular carcinoma (ortholog); FOUND IN interleukin-18 receptor complex (ortholog); plasma membrane (ortholog) NW_004955470 7894900 7923653 + 102021331 AGCD01052816;GBDI01059444;XM_005400771;XM_005400772;XM_013522677 XP_005400828;XP_005400829;XP_013378131 MODEL 39132007 rrna 5S_rRNA 5S ribosomal RNA 8904635 protein-coding LOC102012694 solute carrier organic anion transporter family member 5A1 NW_004955444 9855499 9886614 + 102012694 AGCD01038995;GBCQ01074693;XM_013518225 XP_013373679 MODEL 8968340 protein-coding Emc10 ER membrane protein complex subunit 10 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell migration (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) NW_004955559 672055 676569 - 102018659 AGCD01073607;GBBH01088737;GBCQ01033482;XM_005412783 XP_005412840 MODEL 8998923 protein-coding Efnb2 ephrin B2 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adherens junction organization (ortholog); angiogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cervical cancer (ortholog); colon carcinoma (ortholog); colorectal carcinoma (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955404 5000906 5030068 + 102016557 AGCD01003303;GBDJ01130272;XM_013516817 XP_013372271 MODEL 8979075 protein-coding LOC102003711 protein FAM170A-like NW_004955582 198318 205621 + 102003711 AGCD01075748;AGCD01075749;GBDF01050789;XM_005414281;XM_005414282 XP_005414338;XP_005414339 MODEL 9015108 protein-coding LOC102006896 apolipoprotein L2-like NW_004955413 22677705 22696823 + 102006896 AGCD01014312;AGCD01014313;GBBH01039748;XM_013511299 XP_013366753 MODEL 8846267 protein-coding LOC102004061 olfactory receptor 52E4-like NW_004955414 21799689 21800671 + 102004061 AGCD01015432;XM_013511735 XP_013367189 MODEL 39132008 rrna 5S_rRNA 5S ribosomal RNA 9004629 protein-coding Dync2h1 dynein cytoplasmic 2 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); coronary vasculature development (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular dysplasia 10 (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955412 6267726 6518888 + 102013071 AGCD01012671;AGCD01012672;AGCD01012673;AGCD01012674;AGCD01012675;GBCE01156315;GBCE01171445;XM_013511077 XP_013366531 MODEL 8809006 protein-coding LOC102006544 cytochrome b-c1 complex subunit 8 INVOLVED IN cerebellar Purkinje cell layer development (ortholog); hippocampus development (ortholog); hypothalamus development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955408 4240072 4241342 + 102006544 AGCD01008099;GBDF01003550;XM_005376118;XM_005376119 XP_005376175;XP_005376176 MODEL 39134008 misc_rna 7SK 7SK RNA 8980605 pseudo LOC102004429 40S ribosomal protein S2 pseudogene NW_004955561 1164116 1164961 - 102004429 AGCD01073840 MODEL 8942096 protein-coding Kcnd1 potassium voltage-gated channel subfamily D member 1 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); PARTICIPATES IN excitatory synaptic transmission pathway; long term potentiation; ASSOCIATED WITH absence epilepsy (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog); FOUND IN neuronal cell body (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955543 487312 500232 - 102003696 AGCD01071587;GBDJ01236112;XM_005411304;XM_005411305;XM_013508157 XP_005411361;XP_005411362;XP_013363611 MODEL 10392057 protein-coding Cdc25c cell division cycle 25C ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase binding (ortholog); WW domain binding (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); endometrial cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); nuclear speck (ortholog) NW_004955418 2114053 2138513 + 106148229 AGCD01018741;AGCD01018742;AGCD01018743;GBDF01040026;XM_013512874 XP_013368328 MODEL 39132250 rrna 5S_rRNA 5S ribosomal RNA 9018986 protein-coding Epyc epiphycan INVOLVED IN articular cartilage development (ortholog); bone development (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955405 28182890 28212864 - 102018797 AGCD01005233;GBCE01000127;XM_005374447 XP_005374504 MODEL 8975913 protein-coding Actr3 actin related protein 3 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATPase binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); astrocyte differentiation (ortholog); asymmetric cell division (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin filament (ortholog); apical ectoplasmic specialization (ortholog); apical tubulobulbar complex (ortholog) NW_004955459 15216914 15284013 - 102029596 AGCD01048312;AGCD01048313;AGCD01048314;AGCD01048315;AGCD01048316;AGCD01048317;AY533216;GBCC01000263;XM_005397698 AAS59419;XP_005397755 MODEL 9004906 protein-coding Angptl8 angiopoietin like 8 INVOLVED IN cell maturation (ortholog); fat cell differentiation (ortholog); glucose metabolic process (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 2205424 2207611 + 102016286 AGCD01061753;GBDJ01401913;XM_005405640;XM_013505180 XP_005405697;XP_013360634 MODEL 8933016 protein-coding Cebpg CCAAT enhancer binding protein gamma ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); enucleate erythrocyte differentiation (ortholog); immune response (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955468 3137106 3141733 + 102027164 AGCD01051857;GBDF01050723;XM_005399985 XP_005400042 MODEL 9055514 protein-coding Hrh3 histamine receptor H3 ENCODES a protein that exhibits amine binding (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN cAMP metabolic process (ortholog); cognition (ortholog); drinking behavior (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); cervical cancer (ortholog); Experimental Seizures (ortholog) NW_004955528 1819247 1826707 + 102003480 AGCD01069572;AGCD01069573;GBDF01069327;XM_013507434 XP_013362888 MODEL 8945037 protein-coding Gpr75 G protein-coupled receptor 75 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955441 19576490 19579447 - 102004010 AGCD01037354;XM_005391028 XP_005391085 MODEL 8835268 protein-coding LOC102009161 lupus La protein-like NW_004955412 27605630 27607235 - 102009161 AGCD01013242;GBBH01116715;GBCC01021705;XM_005378521 XP_005378578 MODEL 8979912 protein-coding Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); calcium-dependent ATPase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alcohol Myopathy (ortholog); anxiety disorder (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); H zone (ortholog); I band (ortholog) NW_004955493 6559995 6578461 - 102013308 AGCD01061119;GBCB01099818;XM_005405160 XP_005405217 MODEL 8822781 protein-coding Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ENCODES a protein that exhibits enzyme activator activity (ortholog); isocitrate dehydrogenase (NAD+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN isocitrate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); FOUND IN isocitrate dehydrogenase complex (NAD+) (ortholog); mitochondrion (ortholog); photoreceptor inner segment (ortholog) NW_004955580 500712 507512 - 102017929 AGCD01075607;GBBH01060315;XM_005414148;XM_013509712 XP_005414205;XP_013365166 MODEL 8908082 protein-coding Adora2a adenosine A2a receptor ENCODES a protein that exhibits alpha-actinin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); astrocyte activation (ortholog); eating behavior (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH amphetamine abuse (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN asymmetric synapse (ortholog); axolemma (ortholog); axon (ortholog) NW_004955455 7886720 7906214 + 102028266 AGCD01045866;GBDJ01093845;XM_005396382;XM_005396384;XM_005396385;XM_005396386;XM_013520322;XM_013520323;XM_013520324 XP_005396439;XP_005396441;XP_005396442;XP_005396443;XP_013375776;XP_013375777;XP_013375778 MODEL 8789110 protein-coding Capza1 capping actin protein of muscle Z-line subunit alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); cell junction assembly (ortholog); dynein-driven meiotic oscillatory nuclear movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN brush border (ortholog); cell-cell junction (ortholog); cortical cytoskeleton (ortholog) NW_004955435 16048213 16087814 + 102004636 AGCD01033293;GBDF01080954;XM_005388962;XM_013516421 XP_005389019;XP_013371875 MODEL 8822490 pseudo LOC102008050 mitochondrial import receptor subunit TOM22 homolog pseudogene NW_004955452 2641703 2642225 - 102008050 AGCD01043901 MODEL 8739842 protein-coding Fbxo17 F-box protein 17 ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) NW_004955468 591653 598370 + 102029729 AGCD01051718;AGCD01051719;GBCQ01039517;GBDJ01180944;XM_005399801 XP_005399858 MODEL 8840939 protein-coding Gcg glucagon ENCODES a protein that exhibits gastric inhibitory polypeptide receptor binding (ortholog); glucagon receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN positive regulation of adenylate cyclase activity; adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN forkhead class A signaling pathway; glucagon signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); Alzheimer's disease (ortholog); Anorexia (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955449 11708152 11716429 + 102018785 AGCD01042092;XM_005393317;XM_013518788 XP_005393374;XP_013374242 MODEL 8751301 protein-coding LOC102021665 complement C5 NW_004955419 6999448 7096842 + 102021665 AGCD01019868;AGCD01019869;AGCD01019870;AGCD01019871;AGCD01019872;AGCD01019873;GBDK01083338;XM_005382580 XP_005382637 MODEL 8844817 protein-coding Trim24 tripartite motif containing 24 ENCODES a protein that exhibits chromatin binding (ortholog); estrogen response element binding (ortholog); histone H3K23ac reader activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to estrogen stimulus (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); castration-resistant prostate carcinoma (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); mitochondrion (ortholog) NW_004955494 4308924 4421588 - 102009957 AGCD01061494;AGCD01061495;AGCD01061496;AGCD01061497;AGCD01061498;GBBH01187802;GBDI01127792;XM_013504966 XP_013360420 MODEL 8888144 protein-coding LOC102012695 olfactory receptor 2Z1 ASSOCIATED WITH prostate cancer (ortholog) NW_004955563 779884 780825 - 102012695 AGCD01074088;XM_005413204 XP_005413261 MODEL 10351740 protein-coding LOC106149911 translation initiation factor IF-2-like NW_004955457 12733466 12735613 - 106149911 AGCD01047026;GBDK01226244;XM_013520667 XP_013376121 MODEL 8987230 protein-coding Dgkh diacylglycerol kinase eta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); phosphatidic acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); endosome (ortholog) NW_004955518 4104700 4263657 - 102022731 AGCD01067820;AGCD01067821;AGCD01067822;AGCD01067823;GBBH01109666;GBDK01075088;XM_005409113 XP_005409170 MODEL 8757227 protein-coding Cntnap3c contactin associated protein family member 3C NW_004955422 24302044 24415392 + 102027871 AGCD01023220;GBDF01207795;XM_005384980 XP_005385037 MODEL 8838936 ncrna LOC102009517 uncharacterized LOC102009517 NW_004955423 4665440 4705460 + 102009517 AGCD01023541;AGCD01023542;AGCD01023543;GBDF01110689;XR_260953 MODEL 8992440 protein-coding LOC102010304 protein LEG1 homolog NW_004955436 8564756 8573875 + 102010304 AGCD01033743;GBBH01076388;XM_005389173 XP_005389230 MODEL 8871171 pseudo LOC102008418 40S ribosomal protein S13 pseudogene NW_004955485 7336794 7337638 - 102008418 AGCD01058654;XM_005403816 MODEL 9039289 protein-coding Akip1 A-kinase interacting protein 1 INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); diastolic heart failure (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955414 24667718 24677556 + 102024215 AGCD01015552;GBDF01120946;XM_005380245;XM_005380246;XM_013512045;XM_013512046;XR_001233171 XP_005380302;XP_005380303;XP_013367499;XP_013367500 MODEL 8899302 protein-coding Ccdc159 coiled-coil domain containing 159 INVOLVED IN gene expression (ortholog); regulation of phosphatase activity (ortholog); single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN sperm head-tail coupling apparatus (ortholog) NW_004955495 2263350 2270043 + 102019288 AGCD01061760;GBDI01196961;XM_005405650;XM_005405651;XM_005405652;XM_005405653;XM_005405654 XP_005405707;XP_005405708;XP_005405709;XP_005405710;XP_005405711 MODEL 39133460 misc_rna 7SK 7SK RNA 8969917 ncrna LOC102004063 uncharacterized LOC102004063 NW_004955472 11452010 11467899 - 102004063 AGCD01053756;GBBH01126775;XR_001237068;XR_001237069;XR_263569;XR_263571 MODEL 39134279 misc_rna 7SK 7SK RNA 8845654 protein-coding Chst4 carbohydrate sulfotransferase 4 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN leukocyte tethering or rolling (ortholog); N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); melanoma (ortholog); FOUND IN Golgi membrane (ortholog); trans-Golgi network (ortholog) NW_004955484 4234677 4245092 + 102010590 AGCD01058206;GBBH01126644;XM_005403503;XM_005403504;XM_005403507;XM_013503843;XM_013503844;XM_013503845 XP_005403560;XP_005403561;XP_005403564;XP_013359297;XP_013359298;XP_013359299 MODEL 8743996 ncrna LOC102004433 uncharacterized LOC102004433 NW_004955446 7583181 7605662 - 102004433 AGCD01040125;AGCD01040126;GBCQ01106414;XR_001235672;XR_001235673;XR_001235674;XR_001235675;XR_001235676;XR_001235677;XR_001235678;XR_001235679;XR_001235680;XR_262387 MODEL 8832308 protein-coding LOC102011445 translation initiation factor IF-2-like NW_004955418 844476 848795 + 102011445 AGCD01018691;GBDF01112395;XM_005382047 XP_005382104 MODEL 8768829 protein-coding Ccndbp1 cyclin D1 binding protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 9772823 9782047 + 102029620 AGCD01017099;GBDI01174921;XM_005381367 XP_005381424 MODEL 8966539 protein-coding LOC102011064 transmembrane protease serine 11D NW_004955447 4999930 5082159 + 102011064 AGCD01040736;AGCD01040737;AGCD01040738;AGCD01040739;AGCD01040740;AGCD01040741;GBDI01165135;XM_013518471 XP_013373925 MODEL 8892010 protein-coding Ca5a carbonic anhydrase 5A ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH anemia (ortholog); CARBONIC ANHYDRASE VA DEFICIENCY, HYPERAMMONEMIA DUE TO (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955541 2141450 2159955 - 102003176 AGCD01071402;GBBH01033496;XM_005411015 XP_005411072 MODEL 8751626 pseudo LOC102005464 KATNB1-like protein 1 NW_004955415 14290724 14297874 + 102005464 AGCD01016295 MODEL 9058612 protein-coding Hrh4 histamine receptor H4 ENCODES a protein that exhibits histamine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955402 12809164 12826952 + 102011067 AGCD01000404;AGCD01000405;GBDK01207919;XM_005372722;XM_005372724;XM_013505130;XR_259052 XP_005372779;XP_005372781;XP_013360584 MODEL 9040693 protein-coding Itih4 inter-alpha-trypsin inhibitor heavy chain 4 INVOLVED IN acute-phase response (ortholog); response to cytokine (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Bacteremia (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955430 2772064 2787912 - 102026560 AGCD01029180;AGCD01029181;GBDK01322599;XM_005387354 XP_005387411 MODEL 9001189 protein-coding Ap5m1 adaptor related protein complex 5 subunit mu 1 INVOLVED IN endosomal transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog); cytosol (ortholog); late endosome (ortholog) NW_004955466 11191511 11216274 + 102025777 AGCD01051085;GBDF01225513;XM_005399202 XP_005399259 MODEL 8835204 protein-coding Efnb3 ephrin B3 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon choice point recognition (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); movement disease (ortholog); sarcoma (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); plasma membrane (ortholog) NW_004955467 9217796 9225223 - 102006325 AGCD01051484;GBBH01129008;XM_005399466;XM_005399467 XP_005399523;XP_005399524 MODEL 39133884 misc_rna 7SK 7SK RNA 8739150 protein-coding Il19 interleukin 19 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN interleukin-19-mediated signaling pathway (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); negative regulation of low-density lipoprotein particle clearance (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH asthma (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955406 42376102 42384902 + 102022669 AGCD01006704;AGCD01006705;XM_013502759;XM_013502762 XP_013358213;XP_013358216 MODEL 39132009 rrna 5S_rRNA 5S ribosomal RNA 8982295 ncrna LOC102006897 uncharacterized LOC102006897 NW_004955469 7416386 7428166 + 102006897 AGCD01052415;GBDF01307558;XR_263435 MODEL 39131451 protein-coding LHFPL5 LHFPL tetraspan subfamily member 5 8972225 protein-coding LOC102008052 endogenous retrovirus group K member 21 Rec protein-like NW_004955405 858916 862820 + 102008052 AGCD01004588;GBDF01277735;XM_005374249 XP_005374306 MODEL 8867093 pseudo LOC102006547 lupus La protein pseudogene NW_004955458 8690267 8691504 + 102006547 AGCD01047620 MODEL 8785946 protein-coding LOC102021666 uncharacterized LOC102021666 NW_004955419 27619572 27626303 + 102021666 AGCD01020444;GBCE01016841;XM_013513108 XP_013368562 MODEL 39133545 misc_rna 7SK 7SK RNA 8919274 protein-coding Cdc26 cell division cycle 26 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); sarcoma (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955419 14206167 14218487 + 102025009 AGCD01020013;AGCD01020014;AGCD01020015;GBDF01157852;XM_005382682;XM_005382683;XM_005382684;XM_013513138 XP_005382739;XP_005382740;XP_005382741;XP_013368592 MODEL 8922139 protein-coding Actr3b actin related protein 3B ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955491 6690246 6741900 + 102004717 AGCD01060570;AGCD01060571;GBBH01036550;GBCE01159382;XM_013504654 XP_013360108 MODEL 39132251 rrna 5S_rRNA 5S ribosomal RNA 8765433 protein-coding Cebpz CCAAT enhancer binding protein zeta ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955441 5013144 5033830 - 102003285 AGCD01036867;GBDF01251981;XM_005390868 XP_005390925 MODEL 8814618 protein-coding Kcnd2 potassium voltage-gated channel subfamily D member 2 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); cardiac muscle cell action potential (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); caveola (ortholog); dendrite (ortholog) NW_004955479 2062607 2545576 + 102020665 AGCD01056262;AGCD01056263;AGCD01056264;AGCD01056265;AGCD01056266;AGCD01056267;AGCD01056268;AGCD01056269;AGCD01056270;AGCD01056271;AGCD01056272;AGCD01056273;AGCD01056274;AGCD01056275;AGCD01056276;GBCE01108897;XM_005402450 XP_005402507 MODEL 8741680 protein-coding LOC102017580 actin-like NW_004955422 15156081 15198900 + 102017580 AGCD01022876;GBDF01053097;XM_013513883;XM_013513884;XM_013513885 XP_013369337;XP_013369338;XP_013369339 MODEL 8917663 protein-coding Anhx anomalous homeobox NW_004955482 3083 9557 - 102021662 AGCD01057159;XM_005403232 XP_005403289 MODEL 8894665 pseudo LOC102009162 Krueppel-like factor 3 pseudogene NW_004955412 32434354 32435058 - 102009162 AGCD01013355;XR_260036 MODEL 8799698 protein-coding Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel regulator activity (ortholog); calcium ion binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome membrane docking (ortholog); calcium ion import into sarcoplasmic reticulum (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acrokeratosis verruciformis (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN apical ectoplasmic specialization (ortholog); calcium ion-transporting ATPase complex (ortholog); endoplasmic reticulum (ortholog) NW_004955482 7233336 7295754 + 102004070 AGCD01057449;AGCD01057450;AGCD01057451;AGCD01057452;GBCB01043523;GBDK01076268;XM_013503694;XR_001230987 XP_013359148 MODEL 8853150 protein-coding Gpr82 G protein-coupled receptor 82 INVOLVED IN adipose tissue development (ortholog); energy homeostasis (ortholog); response to food (ortholog); ASSOCIATED WITH prostate cancer (ortholog) NW_004955565 1075457 1080418 - 102027242 AGCD01074303;GBCE01020711;XM_005413248;XM_013509211 XP_005413305;XP_013364665 MODEL 8861321 protein-coding LOC102004443 uncharacterized LOC102004443 NW_004955450 6923696 6931369 + 102004443 AGCD01042529;GBDK01381035;XM_005393876 XP_005393933 MODEL 8814119 pseudo LOC102003712 N-alpha-acetyltransferase 50 pseudogene NW_004955402 792233 792986 - 102003712 AGCD01000033 MODEL 9062278 protein-coding Capza2 capping actin protein of muscle Z-line subunit alpha 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN brush border (ortholog); cortical cytoskeleton (ortholog); F-actin capping protein complex (ortholog) NW_004955432 22595169 22625363 + 102013441 AGCD01031263;GBDJ01075806;XM_013515922 XP_013371376 MODEL 8863916 ncrna LOC102008419 uncharacterized LOC102008419 NW_004955420 12338859 12346661 + 102008419 AGCD01020861;GBDF01156176;XR_001233788;XR_001233789;XR_260709 MODEL 8851300 protein-coding Clic2 chloride intracellular channel 2 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (ortholog); regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955594 374332 393802 + 102023095 AGCD01076427;GBDI01262822;XM_005414643 XP_005414700 MODEL 8800074 protein-coding Akirin1 akirin 1 INVOLVED IN myoblast migration involved in skeletal muscle regeneration (ortholog); negative regulation of satellite cell differentiation (ortholog); negative regulation of skeletal muscle satellite cell proliferation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 16607980 16624376 + 102021083 AGCD01044520;AGCD01044521;GBDF01008545;XM_005395237 XP_005395294 MODEL 9027570 protein-coding Gcgr glucagon receptor ENCODES a protein that exhibits glucagon receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; glucagon signaling pathway; ASSOCIATED WITH ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); Mahvash disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) NW_004955506 1340410 1348028 - 102027766 AGCD01065257;GBDK01432119;XM_013506127;XM_013506128;XM_013506129;XM_013506131;XM_013506132;XM_013506133;XM_013506134;XM_013506135;XM_013506136;XM_013506137 XP_013361581;XP_013361582;XP_013361583;XP_013361585;XP_013361586;XP_013361587;XP_013361588;XP_013361589;XP_013361590;XP_013361591 MODEL 39134009 misc_rna 7SK 7SK RNA 8728342 ncrna LOC102012697 uncharacterized LOC102012697 NW_004955445 18404493 18440417 + 102012697 AGCD01039904;GBDF01229799;XR_262357 MODEL 8905887 protein-coding Trim25 tripartite motif containing 25 ENCODES a protein that exhibits RIG-I binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to leukemia inhibitory factor (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Joubert syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955451 5918287 5934252 + 102012821 AGCD01043189;AGCD01043190;GBDJ01024909;XM_005394067 XP_005394124 MODEL 8823844 protein-coding Dgki diacylglycerol kinase iota ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); excitatory postsynaptic potential (ortholog); habituation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955494 5119419 5541058 + 102006587 AGCD01061518;AGCD01061519;AGCD01061520;AGCD01061521;AGCD01061522;GBDF01250767;XM_013505028 XP_013360482 MODEL 8791703 protein-coding Dync2i1 dynein 2 intermediate chain 1 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); embryonic skeletal system morphogenesis (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); Apnea (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); cilium (ortholog) NW_004955579 1056291 1124623 + 102006724 AGCD01075565;AGCD01075566;AGCD01075567;AGCD01075568;AGCD01075569;AGCD01075570;GBBH01208310;GBDI01257019;XM_013509671 XP_013365125 MODEL 8899522 protein-coding Eqtn equatorin INVOLVED IN acrosomal vesicle exocytosis (ortholog); endocytosis (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955472 7554243 7563620 + 102024109 AGCD01053624;GBDF01050220;XM_005401145 XP_005401202 MODEL 9049014 protein-coding Emc2 ER membrane protein complex subunit 2 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog); endoplasmic reticulum (ortholog) NW_004955417 31019389 31048143 + 102003445 AGCD01018638;GBDJ01140382;XM_005381969;XM_005381970;XM_005381971 XP_005382026;XP_005382027;XP_005382028 MODEL 8764969 protein-coding Ccne1 cyclin E1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); antral ovarian follicle growth (ortholog); cellular response to nutrient (ortholog); PARTICIPATES IN G1/S transition pathway; mTOR signaling pathway; ASSOCIATED WITH Bowen's Disease (ortholog); breast adenocarcinoma (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); cyclin E1-CDK2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955468 7803610 7814872 - 102010889 AGCD01052008;GBDF01123114;XM_005400106;XM_005400107 XP_005400163;XP_005400164 MODEL 8719840 protein-coding LOC102009525 sperm motility kinase 2B-like NW_004955429 13400335 13403083 + 102009525 AGCD01028747;GBDK01097126;XM_005386993 XP_005387050 MODEL 8950745 pseudo LOC102010305 protein archease pseudogene NW_004955532 1134983 1135508 + 102010305 AGCD01070166 MODEL 8833754 protein-coding Idnk IDNK gluconokinase ENCODES a protein that exhibits gluconokinase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog) NW_004955432 3626148 3647285 - 102011033 AGCD01030672;AGCD01030673;GBDI01383927;XM_013516000;XM_013516001 XP_013371454;XP_013371455 MODEL 39132010 rrna 5S_rRNA 5S ribosomal RNA 9009210 protein-coding Ccdc160 coiled-coil domain containing 160 ASSOCIATED WITH genetic disease (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955473 725822 742698 - 102025113 AGCD01053853;GBBH01204252;XM_005401202;XM_005401203 XP_005401259;XP_005401260 MODEL 8790087 protein-coding Abhd17b abhydrolase domain containing 17B, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of protein localization to microtubule (ortholog); positive regulation of protein localization to endosome (ortholog); protein depalmitoylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) NW_004955434 1262956 1302877 + 102020481 AGCD01032060;AGCD01032061;GBBH01207117;XM_005388523;XM_005388524;XM_013516341;XM_013516342;XM_013516343;XM_013516344 XP_005388580;XP_005388581;XP_013371795;XP_013371796;XP_013371797;XP_013371798 MODEL 8793200 protein-coding Brf2 BRF2 general transcription factor IIIB subunit ENCODES a protein that exhibits RNA polymerase III type 3 promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); transcription factor TFIIIB complex (ortholog) NW_004955463 13549571 13553946 - 102013483 AGCD01049871;GBDJ01061574;XM_013521531 XP_013376985 MODEL 8927884 pseudo LOC102004065 ribonuclease UK114-like NW_004955474 6358259 6358744 - 102004065 AGCD01054474 MODEL 10318582 ncrna LOC106149912 uncharacterized LOC106149912 NW_004955457 358067 371560 - 106149912 AGCD01046709;AGCD01046710;AGCD01046711;XR_001236377 MODEL 9065083 ncrna LOC102006548 uncharacterized LOC102006548 NW_004955460 7441771 7442931 + 102006548 AGCD01048482;GBDF01093828;XR_263038 MODEL 9035295 pseudo LOC102011448 60S ribosomal protein L5-like NW_004955419 28970094 28970946 - 102011448 AGCD01020481 MODEL 8828778 protein-coding Fbxo2 F-box protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); carbohydrate binding (ortholog); INVOLVED IN ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955486 2212001 2217260 + 102009844 AGCD01058995;GBDI01225872;GBDJ01313428;XM_005404000 XP_005404057 MODEL 8970793 protein-coding Ank1 ankyrin 1 ENCODES a protein that exhibits ATPase binding (ortholog); cytoskeletal adaptor activity (ortholog); enzyme binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); erythrocyte development (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); ASSOCIATED WITH anemia (ortholog); bone development disease (ortholog); Fever (ortholog); FOUND IN A band (ortholog); ankyrin-1 complex (ortholog); axolemma (ortholog) NW_004955536 1049325 1237943 + 102012241 AGCD01070748;AGCD01070749;AGCD01070750;AGCD01070751;GBDF01253297;XM_005410521;XM_005410522;XM_005410523;XM_013507729;XM_013507730;XM_013507731;XR_001232062 XP_005410578;XP_005410579;XP_005410580;XP_013363183;XP_013363184;XP_013363185 MODEL 8755540 pseudo LOC102011065 60S ribosomal protein L4-like NW_004955447 17826623 17831419 + 102011065 AGCD01041137 MODEL 8737604 protein-coding Ca5b carbonic anhydrase 5B ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN response to bacterium (ortholog); FOUND IN mitochondrion (ortholog) NW_004955519 2415722 2455052 - 102012120 AGCD01067929;AGCD01067930;AGCD01067931;GBCE01169072;XM_005409159 XP_005409216 MODEL 9037993 protein-coding Kcnd3 potassium voltage-gated channel subfamily D member 3 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cardiac muscle cell action potential involved in contraction (ortholog); cell communication involved in cardiac conduction (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Arthralgia (ortholog); atrial fibrillation (ortholog); Brugada syndrome (ortholog); FOUND IN caveola (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) NW_004955435 15227386 15431136 - 102029112 AGCD01033264;AGCD01033265;AGCD01033266;AGCD01033267;AGCD01033268;AGCD01033269;AGCD01033270;GBCQ01171049;XM_005388954 XP_005389011 MODEL 8884607 protein-coding Ap5s1 adaptor related protein complex 5 subunit sigma 1 INVOLVED IN double-strand break repair via homologous recombination (ortholog); endosomal transport (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog); cytosol (ortholog); late endosome (ortholog) NW_004955415 14665450 14669456 + 102004803 AGCD01016304;GBDF01193099;XM_005380809;XM_005380810 XP_005380866;XP_005380867 MODEL 39133885 misc_rna 7SK 7SK RNA 9044280 protein-coding Itih5 inter-alpha-trypsin inhibitor heavy chain 5 INVOLVED IN uterus development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955421 24042405 24125085 - 102007668 AGCD01022204;AGCD01022205;AGCD01022206;GBCE01092378;XM_005383872;XM_013513750;XM_013513751 XP_005383929;XP_013369204;XP_013369205 MODEL 8810390 ncrna LOC102006898 uncharacterized LOC102006898 NW_004955414 6093328 6094333 - 102006898 AGCD01014908;GBBH01201308;XR_260154 MODEL 39134280 misc_rna 7SK 7SK RNA 9056648 protein-coding Lhfpl6 LHFPL tetraspan subfamily member 6 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955431 6745745 6977662 + 102017595 AGCD01030065;AGCD01030066;AGCD01030067;XM_013515896 XP_013371350 MODEL 8846111 protein-coding Gch1 GTP cyclohydrolase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); GTP binding (ortholog); GTP cyclohydrolase I activity (ortholog); INVOLVED IN dihydrobiopterin metabolic process (ortholog); dopamine biosynthetic process (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955409 8624225 8670436 + 102029271 AGCD01009423;GBDF01115282;XM_005376759 XP_005376816 MODEL 8906960 protein-coding LOC102008062 keratin-associated protein 10-10-like NW_004955407 41537601 41546262 - 102008062 AGCD01007870;XM_013505443 XP_013360897 MODEL 8794402 protein-coding Il1a interleukin 1 alpha ENCODES a protein that exhibits copper ion binding (ortholog); cytokine activity (ortholog); INVOLVED IN cellular response to heat (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); allergic bronchopulmonary aspergillosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955470 1527710 1538418 + 102024893 AGCD01052644;AGCD01052645;GBDK01021553;XM_005400596 XP_005400653 MODEL 9030402 protein-coding Hrob homologous recombination factor with OB-fold ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA synthesis involved in DNA repair (ortholog); female gamete generation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955451 17256593 17264872 + 102009341 AGCD01043731;GBDF01048431;XM_005394519;XM_005394520;XM_013519053 XP_005394576;XP_005394577;XP_013374507 MODEL 9035641 ncrna LOC102021667 uncharacterized LOC102021667 NW_004955485 5568877 5574178 + 102021667 AGCD01058597;GBDF01042208;XR_263907 MODEL 39132252 rrna 5S_rRNA 5S ribosomal RNA 8833408 protein-coding Chst7 carbohydrate sulfotransferase 7 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); N-acetylglucosamine metabolic process (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955516 1435972 1466249 - 102026462 AGCD01067426;AGCD01067427;GBCB01008873;XM_005408977;XM_005408978;XM_005408979;XR_264531 XP_005409034;XP_005409035;XP_005409036 MODEL 9051145 protein-coding Cdc27 cell division cycle 27 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); metaphase/anaphase transition of mitotic cell cycle (ortholog); neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955478 9927871 10002020 + 102010582 AGCD01056109;AGCD01056110;AGCD01056111;GBDF01085978;XM_005402251;XM_005402252;XM_005402253;XM_013503141;XM_013503142;XM_013503143 XP_005402308;XP_005402309;XP_005402310;XP_013358595;XP_013358596;XP_013358597 MODEL 8786201 protein-coding Actr5 actin related protein 5 INVOLVED IN chromatin remodeling (ortholog); double-strand break repair (ortholog); positive regulation of DNA repair (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); Ino80 complex (ortholog); nucleus (ortholog) NW_004955445 17991969 18024525 - 102009433 AGCD01039897;AGCD01039898;GBDJ01134091;XM_005392530 XP_005392587 MODEL 8967243 protein-coding LOC102004444 beta-defensin 1-like ENCODES a protein that exhibits double-stranded DNA binding; CCR6 chemokine receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN killing of cells of another organism; antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); calcium-mediated signaling (ortholog); ASSOCIATED WITH otitis media; Actinobacillus Infections (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); microvesicle (ortholog) NW_004955403 53643328 53644361 + 102004444 AGCD01003067;AY128668;GBDI01106599;XM_005373833 AAM97293;P83943;XP_005373890 MODEL 8717272 protein-coding Adora2b adenosine A2b receptor ENCODES a protein that exhibits G protein-coupled adenosine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled adenosine receptor signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Neoplasm Metastasis (ortholog); Reperfusion Injury (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955467 1342271 1363149 + 102011637 AGCD01051262;GBDJ01175337;XM_005399305 XP_005399362 MODEL 8911710 protein-coding Cecr2 cat eye syndrome chromosome region, candidate 2 ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); cochlea development (ortholog); execution phase of apoptosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anencephaly (ortholog); autistic disorder (ortholog); FOUND IN CERF complex (ortholog); euchromatin (ortholog); ISWI-type complex (ortholog) NW_004955454 5581985 5643685 + 102027812 AGCD01045176;AGCD01045177;AGCD01045178;AGCD01045179;GBDF01016427;XM_013520238;XM_013520239;XM_013520240;XM_013520241;XM_013520243;XM_013520244 XP_013375692;XP_013375693;XP_013375694;XP_013375695;XP_013375697;XP_013375698 MODEL 9032967 protein-coding LOC102009166 TRIO and F-actin-binding protein-like NW_004955413 24091962 24110422 + 102009166 AGCD01014347;AGCD01014348;XM_013511302 XP_013366756 MODEL 8800139 protein-coding Ca6 carbonic anhydrase 6 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955486 4234293 4249026 - 102025128 AGCD01059057;GBBH01198071;XM_005404045 XP_005404102 MODEL 8910170 protein-coding LOC102003715 prolactin-like NW_004955634 57648 64392 - 102003715 AGCD01077606;XM_005415042 XP_005415099 MODEL 8967882 protein-coding Clic3 chloride intracellular channel 3 ENCODES a protein that exhibits chloride channel activity (ortholog); protein-disulfide reductase (glutathione) activity (ortholog); INVOLVED IN chloride transport (ortholog); positive regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); Familial Pancreatic Carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); nuclear body (ortholog) NW_004955513 5020105 5022000 - 102028783 AGCD01066950;AGCD01066951;GBCB01067084;GBDJ01316745;XM_013506644 XP_013362098 MODEL 9038231 protein-coding Efr3a EFR3 homolog A INVOLVED IN protein localization to plasma membrane (ortholog); synaptic vesicle priming (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955461 6588178 6687499 + 102010676 AGCD01048910;AGCD01048911;GBCQ01067382;XM_005398007;XM_005398008;XM_005398009;XM_005398010;XM_005398011 XP_005398064;XP_005398065;XP_005398066;XP_005398067;XP_005398068 MODEL 8731970 protein-coding Akirin2 akirin 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); defense response to bacterium (ortholog); embryo development ending in birth or egg hatching (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleoplasm (ortholog) NW_004955411 14600106 14619374 - 102029487 AGCD01011922;AGCD01011923;GBCB01023416;GBCE01077564;XM_005377736 XP_005377793 MODEL 8768006 protein-coding Cfap68 cilia and flagella associated protein 68 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955412 13605526 13609865 + 102020782 AGCD01012842;GBDF01001491;XM_005378086;XM_005378087 XP_005378143;XP_005378144 MODEL 39133580 misc_rna 7SK 7SK RNA 8731622 protein-coding LOC102017582 sulfotransferase 1A1-like NW_004955493 6802353 6802959 - 102017582 AGCD01061141;GBDF01224060;XM_005405345 XP_005405402 MODEL 8873055 protein-coding Abhd17c abhydrolase domain containing 17C, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of protein localization to microtubule (ortholog); positive regulation of protein localization to endosome (ortholog); protein depalmitoylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density membrane (ortholog) NW_004955416 11495651 11543276 + 102020244 AGCD01017188;AGCD01017189;GBBH01143645;XM_005381433 XP_005381490 MODEL 8808913 protein-coding LOC102005466 mas-related G-protein coupled receptor member X1 NW_004955476 26643 27677 - 102005466 AGCD01055190;XM_005401897 XP_005401954 MODEL 8761417 protein-coding Trim26 tripartite motif containing 26 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); host-mediated suppression of symbiont invasion (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955583 303081 325560 - 102013127 AGCD01075810;AGCD01075811;GBCB01073423;GBCE01135032;XM_013509781 XP_013365235 MODEL 8834753 protein-coding Dgkk diacylglycerol kinase kappa ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); intracellular signal transduction (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hypospadias (ortholog); FOUND IN plasma membrane (ortholog) NW_004955543 1468328 1601101 - 102017385 AGCD01071623;AGCD01071624;AGCD01071625;XM_005411355 XP_005411412 MODEL 8903148 protein-coding Fbxo21 F-box protein 21 INVOLVED IN apoptotic process (ortholog); cytokine-mediated signaling pathway (ortholog); ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955455 13989149 14028309 + 102022567 AGCD01046080;AGCD01046081;GBBH01207617;XM_005396545;XM_005396546 XP_005396602;XP_005396603 MODEL 8888099 protein-coding Capza3 capping actin protein of muscle Z-line subunit alpha 3 INVOLVED IN actin filament organization (ortholog); cytoplasm organization (ortholog); spermatid development (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN acrosomal vesicle (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) NW_004955413 14846394 14847489 + 102012084 AGCD01014053;GBDF01006903;XM_005379041 XP_005379098 MODEL 9015771 protein-coding Emc3 ER membrane protein complex subunit 3 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955561 1442953 1459988 - 102016760 AGCD01073855;GBDF01004644;XM_005413063 XP_005413120 MODEL 8766688 protein-coding Ccne2 cyclin E2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN chromosome organization involved in meiotic cell cycle (ortholog); DNA replication initiation (ortholog); homologous chromosome pairing at meiosis (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); endometriosis (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cyclin E2-CDK2 complex (ortholog); nucleus (ortholog) NW_004955417 11027749 11039945 - 102029624 AGCD01018118;GBCQ01066155;XM_005381822 XP_005381879 MODEL 9020022 protein-coding Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); calcium ion transmembrane transporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport from cytosol to endoplasmic reticulum (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); cervical cancer (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) NW_004955467 12911679 12941322 + 102016039 AGCD01051659;GBBH01031864;GBDK01432511;XM_005399699 XP_005399756 MODEL 8931097 ncrna LOC102009527 uncharacterized LOC102009527 NW_004955429 19955225 19971743 - 102009527 AGCD01028974;AGCD01028975;XR_001234478;XR_261368 MODEL 8933570 pseudo LOC102010306 L-lactate dehydrogenase A chain pseudogene NW_004955437 1653118 1654576 - 102010306 AGCD01034224 MODEL 8858528 ncrna LOC102008426 uncharacterized LOC102008426 NW_004955493 5730211 5734272 - 102008426 AGCD01061075;GBCQ01114580;XR_001231278;XR_264085 MODEL 39132011 rrna 5S_rRNA 5S ribosomal RNA 8995095 protein-coding Gpr83 G protein-coupled receptor 83 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); FOUND IN cilium (ortholog); non-motile cilium (ortholog); plasma membrane (ortholog) NW_004955414 216867 229659 + 102018078 AGCD01014711;GBDF01221194;GBDF01221196;XM_005379679;XM_005379680 XP_005379736;XP_005379737 MODEL 8781560 protein-coding Ido1 indoleamine 2,3-dioxygenase 1 ENCODES a protein that exhibits amino acid binding (ortholog); indoleamine 2,3-dioxygenase activity (ortholog); L-tryptophan 2,3-dioxygenase activity (ortholog); INVOLVED IN inflammatory response (ortholog); kynurenic acid biosynthetic process (ortholog); L-tryptophan catabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); smooth muscle contractile fiber (ortholog) NW_004955536 2944770 2955829 - 102018327 AGCD01070806;GBDK01080179;XM_005410538 XP_005410595 MODEL 9000067 protein-coding LOC102006902 serine protease inhibitor Kazal-type 9 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of proteolysis (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) NW_004955415 5971642 5977559 + 102006902 AGCD01016005;GBDJ01000916;XM_005380641;XM_013512380 XP_005380698;XP_013367834 MODEL 8855012 protein-coding Bri3 brain protein I3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955460 14165874 14174464 + 102029053 AGCD01048742;GBDF01045177;GBDI01000286;XM_013521167 XP_013376621 MODEL 8913281 pseudo LOC102006549 E3 ISG15--protein ligase HERC5-like NW_004955409 19021413 19028218 + 102006549 AGCD01009854 MODEL 9013738 protein-coding Chst8 carbohydrate sulfotransferase 8 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN hormone biosynthetic process (ortholog); proteoglycan biosynthetic process (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); peeling skin syndrome 3 (ortholog) NW_004955468 3357368 3486195 + 102028401 AGCD01051859;AGCD01051860;GBDF01158746;XM_005399989;XM_005399990;XM_005399991;XM_005399992 XP_005400046;XP_005400047;XP_005400048;XP_005400049 MODEL 8909584 pseudo LOC102011069 multifunctional protein ADE2 pseudogene NW_004955402 52895248 52897277 + 102011069 AGCD01001350 MODEL 8775375 protein-coding Eral1 Era like 12S mitochondrial rRNA chaperone 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); RNA folding chaperone (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial small ribosomal subunit assembly (ortholog); ribosomal small subunit assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955481 4315139 4320983 - 102019803 AGCD01056933;AGCD01056934;GBCE01115661;XM_005402709;XM_013503383 XP_005402766;XP_013358837 MODEL 8883865 pseudo LOC102011451 uncharacterized LOC102011451 NW_004955421 28537400 28548971 - 102011451 AGCD01022331 MODEL 39133886 misc_rna 7SK 7SK RNA 8937415 protein-coding Ap5z1 adaptor related protein complex 5 subunit zeta 1 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); axon development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955460 10997554 11009435 - 102007521 AGCD01048626;GBDF01119923;XM_005397853 XP_005397910 MODEL 10186628 ncrna LOC106149913 uncharacterized LOC106149913 NW_004955457 2828070 2833723 + 106149913 AGCD01046751;XR_001236378 MODEL 39134010 misc_rna 7SK 7SK RNA 8705945 protein-coding LOC102012698 zinc finger protein 709-like NW_004955569 603589 617354 + 102012698 AGCD01074601;AGCD01074602;XM_013509369 XP_013364823 MODEL 39134282 misc_rna 7SK 7SK RNA 8810943 protein-coding Gchfr GTP cyclohydrolase I feedback regulator ENCODES a protein that exhibits amino acid binding (ortholog); enzyme inhibitor activity (ortholog); GTP cyclohydrolase binding (ortholog); INVOLVED IN protein-containing complex assembly (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); intracellular protein-containing complex (ortholog) NW_004955416 7617333 7620455 + 102026106 AGCD01016995;GBDK01091172;XM_005381258 XP_005381315 MODEL 9031049 ncrna LOC102008064 uncharacterized LOC102008064 NW_004955408 4366570 4372625 + 102008064 AGCD01008109;GBDF01296436;XR_001231915;XR_001231916;XR_001231917;XR_001231918;XR_259659 MODEL 8764806 protein-coding LOC102004074 uncharacterized LOC102004074 NW_004955420 23886315 23891242 - 102004074 AGCD01021263;AGCD01021264;GBDF01041126;XM_005383365;XM_013513352;XR_001233671;XR_001233672 XP_005383422;XP_013368806 MODEL 8999086 protein-coding Il1b interleukin 1 beta ENCODES a protein that exhibits cytokine activity (ortholog); integrin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cellular response to antibiotic (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH otitis media; Otitis Media with Effusion; abdominal aortic aneurysm (ortholog); FOUND IN extracellular region (ortholog); interleukin-1 receptor complex (ortholog); lysosome (ortholog) NW_004955470 1486936 1491888 + 102024552 AGCD01052642;GBCE01179444;XM_005400595 XP_005400652 MODEL 8707134 protein-coding Clic4 chloride intracellular channel 4 ENCODES a protein that exhibits chloride channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Dwarfism (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN anchoring junction (ortholog); apical part of cell (ortholog); cell surface (ortholog) NW_004955452 4479783 4534115 + 102005101 AGCD01043983;AGCD01043984;GBCB01039631;XM_005394817 XP_005394874 MODEL 8700207 protein-coding Dync2i2 dynein 2 intermediate chain 2 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955570 1076498 1086629 - 102030680 AGCD01074785;AGCD01074786;GBDJ01014754;XM_005413560;XM_013509405;XM_013509406;XM_013509407;XM_013509408;XM_013509409 XP_005413617;XP_013364859;XP_013364860;XP_013364861;XP_013364862;XP_013364863 MODEL 8984008 protein-coding Hs1bp3 HCLS1 binding protein 3 INVOLVED IN regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) NW_004955469 3105897 3133918 - 102015711 AGCD01052289;GBCQ01034894;XM_005400353;XM_005400354;XM_013522655;XM_013522656;XR_001236990 XP_005400410;XP_005400411;XP_013378109;XP_013378110 MODEL 39132253 rrna 5S_rRNA 5S ribosomal RNA 8834085 ncrna LOC102021670 uncharacterized LOC102021670 NW_004955486 3982324 3990407 - 102021670 AGCD01059050;GBDF01221596;XR_001231149 MODEL 8902587 protein-coding Cfap69 cilia and flagella associated protein 69 INVOLVED IN flagellated sperm motility (ortholog); olfactory behavior (ortholog); positive regulation of fertilization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); sperm midpiece (ortholog) NW_004955432 7501908 7569799 + 102021036 AGCD01030844;AGCD01030845;AGCD01030846;AGCD01030847;AGCD01030848;GBDI01322737;XM_005387987;XM_005387988;XM_005387990 XP_005388044;XP_005388045;XP_005388047 MODEL 9034052 protein-coding Actr6 actin related protein 6 INVOLVED IN nucleolus organization (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog); Swr1 complex (ortholog) NW_004955405 35942690 35962422 + 102020411 AGCD01005405;GBDF01304007;XM_005374528 XP_005374585 MODEL 8725211 pseudo LOC102005472 CWF19-like protein 2 NW_004955481 1830281 1834787 + 102005472 AGCD01056855 MODEL 8732046 protein-coding LOC102004445 collagen alpha-1(II) chain NW_004955404 512703 521797 + 102004445 AGCD01003202;GBCE01072410;XM_005373945 XP_005374002 MODEL 9039818 protein-coding Ank2 ankyrin 2 ENCODES a protein that exhibits ATPase binding (ortholog); channel activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); atrial cardiac muscle cell to AV node cell communication (ortholog); atrial septum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankyrin-B-related cardiac arrhythmia (ortholog); anxiety disorder (ortholog); FOUND IN A band (ortholog); basolateral plasma membrane (ortholog); costamere (ortholog) NW_004955457 13624590 13938427 - 102015379 AGCD01047049;AGCD01047050;AGCD01047051;AGCD01047052;AGCD01047053;AGCD01047054;GBDF01193274;XM_005397083;XM_005397085;XM_013520726 XP_005397140;XP_005397142;XP_013376180 MODEL 8948599 protein-coding Cel carboxyl ester lipase ENCODES a protein that exhibits acetylesterase activity (ortholog); glycosphingolipid binding (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN ceramide catabolic process (ortholog); intestinal cholesterol absorption (ortholog); pancreatic juice secretion (ortholog); ASSOCIATED WITH chronic pancreatitis (ortholog); diabetes mellitus (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955513 2324025 2382877 + 102006377 AGCD01066873;AGCD01066874;AGCD01066875;AGCD01066876;AGCD01066877;AGCD01066878;GBDF01235380;XM_005408407;XM_005408408 XP_005408464;XP_005408465 MODEL 8933198 ncrna LOC102009168 uncharacterized LOC102009168 NW_004955471 210298 228033 - 102009168 AGCD01052952;GBDF01209473;XR_263509 MODEL 9029266 protein-coding Dgkq diacylglycerol kinase theta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to bile acid (ortholog); diacylglycerol metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955514 452548 475240 - 102004415 AGCD01067010;AGCD01067011;GBCB01099242;XM_005408848 XP_005408905 MODEL 8797242 protein-coding Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); potassium channel regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cardiac muscle cell action potential involved in contraction (ortholog); cellular response to acidic pH (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); membrane raft (ortholog) NW_004955407 33807581 33814356 - 102027489 AGCD01007709;GBDI01027346;XM_005375703 XP_005375760 MODEL 9007857 protein-coding Cntnap4 contactin associated protein family member 4 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); neural precursor cell proliferation (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); plasma membrane (ortholog) NW_004955484 258232 521133 - 102015847 AGCD01057893;AGCD01057894;AGCD01057895;AGCD01057896;AGCD01057897;AGCD01057898;AGCD01057899;AGCD01057900;AGCD01057901;AGCD01057902;GBDK01096017;XM_005403431 XP_005403488 MODEL 8834478 protein-coding LOC102009529 olfactory receptor 5A2-like NW_004955511 3917910 3918862 - 102009529 AGCD01066481;XM_013506389 XP_013361843 MODEL 8988830 protein-coding Efr3b EFR3 homolog B INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); social behavior (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955469 7159087 7215234 + 102029498 AGCD01052411;GBCB01076312;XM_005400569 XP_005400626 MODEL 8897014 pseudo LOC102003718 N-alpha-acetyltransferase 50 pseudogene NW_004955988 4743 5256 + 102003718 AGCD01078815 MODEL 39131811 rrna 5S_rRNA 5S ribosomal RNA 39133582 misc_rna 7SK 7SK RNA 8851707 protein-coding Itk IL2 inducible T cell kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); gamma-delta T cell activation (ortholog); NK T cell differentiation (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 11387595 11447896 + 102013476 AGCD01008308;GBDF01262832;XM_005376228 XP_005376285 MODEL 8819123 protein-coding Adpgk ADP dependent glucokinase ENCODES a protein that exhibits ADP-specific glucokinase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955450 4593295 4625091 + 102026275 AGCD01042469;AGCD01042470;GBDI01256553;XM_005393601;XM_005393602 XP_005393658;XP_005393659 MODEL 9007798 pseudo LOC102011459 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955424 20453388 20454636 + 102011459 AGCD01024856 MODEL 8840067 protein-coding Fbxo22 F-box protein 22 INVOLVED IN cellular response to starvation (ortholog); nucleocytoplasmic transport (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955450 1152383 1171257 + 102014725 AGCD01042355;GBDF01155484;XM_005393464 XP_005393521 MODEL 8720223 protein-coding Cdc34 cell division cycle 34, ubiquitin conjugating enzyme ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); positive regulation of inclusion body assembly (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955495 7170419 7178093 - 102024252 AGCD01062123;GBDF01155493;GBDJ01006834;XM_005406038 XP_005406095 MODEL 8705831 protein-coding Ccnf cyclin F ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of centrosome duplication (ortholog); placenta development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955442 14864935 14890802 - 102011053 AGCD01037845;AGCD01037846;GBBH01183568;GBDF01001353;XM_013518018 XP_013373472 MODEL 8916580 ncrna LOC102008434 uncharacterized LOC102008434 NW_004955424 11874487 11899092 + 102008434 AGCD01024575;AGCD01024576;GBDF01252131;XR_001234207;XR_001234208;XR_001234209;XR_001234210;XR_001234211;XR_001234212;XR_001234213;XR_261052 MODEL 8804211 protein-coding Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); calcium ion transmembrane transporter activity (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion export across plasma membrane (ortholog); cellular response to corticosterone stimulus (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955405 26872379 26932270 - 102015279 AGCD01005205;GBBH01050604;XM_005374438;XM_005374440;XM_005374444;XM_013518195 XP_005374495;XP_005374497;XP_005374501;XP_013373649 MODEL 10217406 protein-coding Ccdc162 chromosome unknown C6orf183 homolog NW_004955411 34213618 34330343 + 106146276 AGCD01012389;AGCD01012390;AGCD01012391;AGCD01012392;AGCD01012393;AGCD01012394;AGCD01012395;AGCD01012396;AGCD01012397;GBDI01020843;XM_013510799;XM_013510800;XM_013510801;XM_013510802;XM_013510803;XM_013510804;XM_013510805 XP_013366253;XP_013366254;XP_013366255;XP_013366256;XP_013366257;XP_013366258;XP_013366259 MODEL 8850626 ncrna LOC102006910 uncharacterized LOC102006910 NW_004955417 25248421 25254129 - 102006910 AGCD01018475;XR_260493 MODEL 8837995 protein-coding Gpr84 G protein-coupled receptor 84 FOUND IN plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955458 1602241 1604492 - 102005900 AGCD01047193;GBCE01172963;XM_005397219 XP_005397276 MODEL 9044765 protein-coding Gck glucokinase ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); D-glucose binding (ortholog); INVOLVED IN calcium ion import (ortholog); carbohydrate phosphorylation (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; forkhead class A signaling pathway; galactokinase deficiency pathway; ASSOCIATED WITH Abdominal Pain (ortholog); absence epilepsy (ortholog); anxiety disorder (ortholog); FOUND IN actin filament (ortholog); basal cortex (ortholog); cell cortex (ortholog) NW_004955456 7784269 7838260 + 102021313 AGCD01046432;AGCD01046433;AGCD01046434;AGCD01046435;GBDI01283119;XM_013520657 XP_013376111 MODEL 8861228 protein-coding Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); intraciliary transport involved in cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); centrosome (ortholog) NW_004955441 10928577 10961194 + 102027573 AGCD01037096;AGCD01037097;AGCD01037098;GBDF01006691;XM_005390934 XP_005390991 MODEL 8974513 protein-coding Clic5 chloride intracellular channel 5 ENCODES a protein that exhibits chloride channel activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); chloride transport (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 103 (ortholog); Hearing Loss (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955437 11053885 11118150 - 102029222 AGCD01034569;GBDK01016876;XM_005389839 XP_005389896 MODEL 9066505 protein-coding Trim27 tripartite motif containing 27 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); mitochondrion (ortholog) NW_004955465 13891001 13902767 - 102008834 AGCD01050633;GBCE01076355;GBCE01076358;XM_013521856 XP_013377310 MODEL 39132254 rrna 5S_rRNA 5S ribosomal RNA 8796542 protein-coding Ca7 carbonic anhydrase 7 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN intracellular pH reduction (ortholog); positive regulation of synaptic transmission, GABAergic (ortholog); regulation of chloride transport (ortholog); ASSOCIATED WITH melanoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytosol (ortholog) NW_004955433 23365832 23374517 + 102023732 AGCD01031959;GBDF01241916;XM_005388474;XM_013516269;XM_013516270 XP_005388531;XP_013371723;XP_013371724 MODEL 8709267 protein-coding Capzb capping actin protein of muscle Z-line subunit beta ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); activation of protein kinase C activity (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN brush border (ortholog); cortical cytoskeleton (ortholog); dendritic spine (ortholog) NW_004955452 34454 168514 - 102011618 AGCD01043797;AGCD01043798;AGCD01043799;AGCD01043800;AGCD01043801;AGCD01043802;GBCE01000866;XM_005394657;XM_005394658 XP_005394714;XP_005394715 MODEL 8917975 protein-coding Abhd18 abhydrolase domain containing 18 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955428 13461446 13519184 - 102004188 AGCD01027953;AGCD01027954;AGCD01027955;AGCD01027956;GBDF01303927;XM_005386733;XM_005386734;XM_013515329;XM_013515330;XM_013515331 XP_005386790;XP_005386791;XP_013370783;XP_013370784;XP_013370785 MODEL 8773613 protein-coding Emc4 ER membrane protein complex subunit 4 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955416 375736 380825 - 102019059 AGCD01016798;GBCB01023546;XM_005381153 XP_005381210 MODEL 8963331 protein-coding LOC102011070 vomeronasal type-1 receptor 4-like NW_004955603 546797 561763 + 102011070 AGCD01076853;AGCD01076854;AGCD01076855;XM_005414848 XP_005414905 MODEL 8787195 protein-coding Chst9 carbohydrate sulfotransferase 9 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN sulfur compound metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955402 14892707 15115846 - 102014958 AGCD01000439;AGCD01000440;AGCD01000441;GBDJ01114105;XM_005372733;XM_005372734;XM_005372735;XM_013506087;XM_013506121;XM_013506152 XP_005372790;XP_005372791;XP_005372792;XP_013361541;XP_013361575;XP_013361606 MODEL 9058602 protein-coding Lhfpl7 LHFPL tetraspan subfamily member 7 NW_004955455 237462 251622 + 102010867 AGCD01045555;GBCQ01058010;XM_005396133;XM_013520489;XM_013520490;XM_013520491 XP_005396190;XP_013375943;XP_013375944;XP_013375945 MODEL 8735886 protein-coding Il1f10 interleukin 1 family member 10 ASSOCIATED WITH stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955470 1198185 1206032 - 102021648 AGCD01052630;GBCC01028004;XM_005400587;XM_013522701 XP_005400644;XP_013378155 MODEL 8754851 protein-coding Akna AT-hook transcription factor INVOLVED IN delamination (ortholog); epithelial to mesenchymal transition (ortholog); neuroblast delamination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); fibrillar center (ortholog) NW_004955419 13218060 13261289 + 102011870 AGCD01019997;AGCD01019998;AGCD01019999;GBBH01060776;GBCE01188222;XM_005382635 XP_005382692 MODEL 8811398 protein-coding Apaf1 apoptotic peptidase activating factor 1 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cardiac muscle cell apoptotic process (ortholog); cell differentiation (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN apoptosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 34619780 34693616 + 102018463 AGCD01005380;AGCD01005381;AGCD01005382;GBBH01172252;GBDF01305895;XM_013518590;XM_013518592 XP_013374044;XP_013374046 MODEL 8983611 ncrna LOC102003724 uncharacterized LOC102003724 NW_004955452 17445620 17459241 - 102003724 AGCD01044554;AGCD01044555;GBDI01162489;XR_262704 MODEL 39134011 misc_rna 7SK 7SK RNA 9026209 protein-coding Ido2 indoleamine 2,3-dioxygenase 2 ENCODES a protein that exhibits indoleamine 2,3-dioxygenase activity (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Chlamydia pneumonia (ortholog); FOUND IN cytoplasm (ortholog) NW_004955536 2894410 2938862 - 102018023 AGCD01070804;AGCD01070805;AGCD01070806;GBCQ01095138;XM_013507732 XP_013363186 MODEL 8912011 pseudo LOC102012703 transmembrane protease serine 11E-like NW_004955447 5103263 5144409 + 102012703 AGCD01040741;AGCD01040742;AGCD01040743 MODEL 39134285 misc_rna 7SK 7SK RNA 8796326 protein-coding LOC102017584 interferon-induced protein with tetratricopeptide repeats 1B NW_004955425 3606058 3611013 - 102017584 AGCD01025294;GBBH01026311;XM_005385853 XP_005385910 MODEL 8867857 protein-coding LOC102008067 stereocilin NW_004955409 27019957 27035448 + 102008067 AGCD01010205;GBDF01030323;XM_005376944;XM_005376945 XP_005377001;XP_005377002 MODEL 8971563 ncrna LOC102006552 uncharacterized LOC102006552 NW_004955463 9133087 9192984 - 102006552 AGCD01049772;AGCD01049773;AGCD01049774;GBDF01280994;XR_263162 MODEL 8746033 protein-coding LOC102004077 protein transport protein Sec61 subunit beta-like NW_004955491 6427300 6427659 + 102004077 AGCD01060529;XM_013504569 XP_013360023 MODEL 8972184 protein-coding LOC102006911 zinc finger protein 14-like NW_004955417 31668874 31705932 - 102006911 AGCD01018660;AGCD01018661;AGCD01018662;GBCE01006196;XM_005381977;XM_013512776 XP_005382034;XP_013368230 MODEL 8762381 ncrna LOC102021673 uncharacterized LOC102021673 NW_004955488 1906171 1944728 - 102021673 AGCD01059513;AGCD01059514;GBDF01253331;XR_263996 MODEL 8862260 protein-coding Erap1 endoplasmic reticulum aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); endopeptidase activity (ortholog); interleukin-6 receptor binding (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); membrane protein ectodomain proteolysis (ortholog); positive regulation of angiogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosing spondylitis (ortholog); Behcet's disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955418 15827560 15859720 + 102010260 AGCD01019112;AGCD01019113;GBCB01073859;GBCQ01099077;XM_013513048 XP_013368502 MODEL 9026966 protein-coding Hs2st1 heparan sulfate 2-O-sulfotransferase 1 ENCODES a protein that exhibits heparan sulfate 2-sulfotransferase activity (ortholog); INVOLVED IN gene expression (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); heparin proteoglycan metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955423 7090246 7253608 - 102018843 AGCD01023594;AGCD01023595;AGCD01023596;GBBH01222046;GBDI01323962;XM_005385118;XM_005385119 XP_005385175;XP_005385176 MODEL 8752822 protein-coding Actr8 actin related protein 8 INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Ino80 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 3851758 3867291 - 102004741 AGCD01029229;AGCD01029230;GBDJ01007143;XM_005387376;XM_013515673 XP_005387433;XP_013371127 MODEL 8899846 protein-coding LOC102005475 E3 ubiquitin-protein ligase Topors-like NW_004955419 22119355 22127230 - 102005475 AGCD01020294;AGCD01020295;GBDF01224788;XM_005382789 XP_005382846 MODEL 8824773 protein-coding Ank3 ankyrin 3 ENCODES a protein that exhibits cadherin binding (ortholog); channel activator activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); axon development (ortholog); axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-related birth defects (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); basal plasma membrane (ortholog) NW_004955425 13522233 13851286 - 102015129 AGCD01025538;AGCD01025539;AGCD01025540;AGCD01025541;AGCD01025542;AGCD01025543;AGCD01025544;GBDJ01224829;XM_013514807;XM_013514808;XM_013514809;XM_013514810;XM_013514811;XM_013514812;XM_013514813;XM_013514814;XM_013514815;XM_013514816;XM_013514817;XM_013514818;XM_013514819;XM_013514820;XM_013514821;XM_013514822;XM_013514823;XM_013514824;XM_013514825 XP_013370261;XP_013370262;XP_013370263;XP_013370264;XP_013370265;XP_013370266;XP_013370267;XP_013370268;XP_013370269;XP_013370270;XP_013370271;XP_013370272;XP_013370273;XP_013370274;XP_013370275;XP_013370276;XP_013370277;XP_013370278;XP_013370279 MODEL 39131427 protein-coding CEL carboxyl ester lipase 8758132 protein-coding LOC102009169 putative olfactory receptor 56B2 NW_004955414 21743001 21743960 + 102009169 AGCD01015431;XM_005380502 XP_005380559 MODEL 39133887 misc_rna 7SK 7SK RNA 8979789 pseudo LOC102009531 eukaryotic translation initiation factor 4B pseudogene NW_004955512 1013969 1019267 + 102009531 AGCD01066629;XR_264452 MODEL 8945300 protein-coding Fbxo24 F-box protein 24 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN axoneme assembly (ortholog); cellular respiration (ortholog); chromatin organization (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955573 305516 313107 - 102019969 AGCD01074973;GBDK01342818;XM_005413717;XM_013509469;XM_013509470;XM_013509471;XM_013509472 XP_005413774;XP_013364923;XP_013364924;XP_013364925;XP_013364926 MODEL 8728965 pseudo LOC102010310 eukaryotic translation initiation factor 3 subunit F-like NW_004955441 1151626 1157056 - 102010310 AGCD01036747 MODEL 8913203 protein-coding Ccng1 cyclin G1 INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of apoptotic process (ortholog); response to gravity (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); breast adenocarcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); nucleoplasm (ortholog) NW_004955408 16846050 16850365 + 102004566 AGCD01008447;GBCE01003446;GBDJ01016073;XM_005376279 XP_005376336 MODEL 8727811 protein-coding Efs embryonal Fyn-associated substrate ENCODES a protein that exhibits protein domain specific binding (ortholog); SH3 domain binding (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955409 36973522 36981079 + 102021103 AGCD01010485;GBBH01207846;XM_005377079;XM_005377081 XP_005377136;XP_005377138 MODEL 8781760 protein-coding Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cardiac muscle cell action potential involved in contraction (ortholog); cellular response to xenobiotic stimulus (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiac Arrhythmias (ortholog); coronary artery disease (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955407 33734969 33736609 + 102026503 AGCD01007707;GBDK01361078;XM_005375700 XP_005375757 MODEL 9021599 protein-coding Bri3bp BRI3 binding protein ASSOCIATED WITH colon adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955482 4710937 4716534 - 102026528 AGCD01057306;GBCQ01176014;GBDF01123268;XM_013503743 XP_013359197 MODEL 39133584 misc_rna 7SK 7SK RNA 39134012 misc_rna 7SK 7SK RNA 8876545 ncrna LOC102012707 uncharacterized LOC102012707 NW_004955584 1044910 1047589 + 102012707 AGCD01075977;GBBH01222868;XR_001232516 MODEL 39132255 rrna 5S_rRNA 5S ribosomal RNA 8741095 protein-coding Adprh ADP-ribosylarginine hydrolase ENCODES a protein that exhibits ADP-ribosylarginine-[protein] hydrolase activity (ortholog); magnesium ion binding (ortholog); potassium ion binding (ortholog); INVOLVED IN protein de-ADP-ribosylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Carcinogenesis (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955427 19271734 19280189 + 102018748 AGCD01027363;GBBH01164641;XM_005386445;XM_013515215 XP_005386502;XP_013370669 MODEL 8812703 protein-coding LOC102011071 PRAME family member 8-like NW_004955618 112533 125114 - 102011071 AGCD01077296;AGCD01077297;GBDF01153091;XM_005415002 XP_005415059 MODEL 9045371 protein-coding Emc6 ER membrane protein complex subunit 6 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955467 13144659 13146434 - 102020231 AGCD01051667;GBBH01164107;XM_005399715 XP_005399772 MODEL 8718403 ncrna LOC102008436 uncharacterized LOC102008436 NW_004955501 720309 731808 + 102008436 AGCD01064038;GBDF01158739;XR_001231521 MODEL 39131812 rrna 5S_rRNA 5S ribosomal RNA 8916839 protein-coding Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); calcium-dependent ATPase activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transport (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cilium (ortholog) NW_004955561 1727935 1851907 - 102019541 AGCD01073864;GBDJ01014644;XM_005413071;XM_005413077 XP_005413128;XP_005413134 MODEL 8700387 protein-coding Dgkz diacylglycerol kinase zeta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); enzyme inhibitor activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) NW_004955422 1658237 1687000 - 102009511 AGCD01022468;AGCD01022469;GBDI01006776;XM_005384031;XM_005384033;XM_005384035;XM_005384038;XM_013514024 XP_005384088;XP_005384090;XP_005384092;XP_005384095;XP_013369478 MODEL 8837814 protein-coding Aknad1 AKNA domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955435 12275079 12314424 - 102025504 AGCD01033139;GBDF01003157;XM_013516539;XM_013516540 XP_013371993;XP_013371994 MODEL 8741540 protein-coding Ccdc166 coiled-coil domain containing 166 NW_004955454 2394109 2396694 - 102010864 AGCD01045019;GBDF01194228;XM_005395801 XP_005395858 MODEL 8766172 ncrna LOC102004449 uncharacterized LOC102004449 NW_004955405 42046220 42053786 + 102004449 AGCD01005576;GBBH01198079;XR_001235965;XR_259459 MODEL 8933930 ncrna LOC102004078 uncharacterized LOC102004078 NW_004955422 13779712 13782349 - 102004078 AGCD01022838;GBDI01019729;XR_260873 MODEL 9010803 protein-coding Gckr glucokinase regulator ENCODES a protein that exhibits carbohydrate binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN intracellular glucose homeostasis (ortholog); negative regulation of glucokinase activity (ortholog); protein import into nucleus (ortholog); PARTICIPATES IN glycogen metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); end stage renal disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955469 9461541 9485034 + 102004056 AGCD01052504;XM_005400572 XP_005400629 MODEL 9046428 protein-coding Trim28 tripartite motif containing 28 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); chromo shadow domain binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); convergent extension involved in axis elongation (ortholog); DNA damage response (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); heterochromatin (ortholog) NW_004955584 1148903 1156001 + 102030140 AGCD01075981;AGCD01075982;GBBH01031424;GBCB01020438;XM_013509851 XP_013365305 MODEL 8823716 protein-coding Clic6 chloride intracellular channel 6 ENCODES a protein that exhibits chloride channel activity (ortholog); D2 dopamine receptor binding (ortholog); D3 dopamine receptor binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); myoepithelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955407 34002656 34042524 + 102029048 AGCD01007716;AGCD01007717;GBDJ01314587;XM_013504459;XM_013504463;XM_013504469;XM_013504472 XP_013359913;XP_013359917;XP_013359923;XP_013359926 MODEL 9007630 protein-coding Abhd2 abhydrolase domain containing 2, acylglycerol lipase ENCODES a protein that exhibits acetylesterase activity (ortholog); diacylglycerol lipase activity (ortholog); hormone binding (ortholog); INVOLVED IN acrosome reaction (ortholog); acylglycerol catabolic process (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); sperm flagellum (ortholog); sperm plasma membrane (ortholog) NW_004955416 15878972 15983322 - 102004383 AGCD01017346;AGCD01017347;AGCD01017348;GBDK01278438;XM_005381560 XP_005381617 MODEL 8907004 pseudo LOC102009179 60S ribosomal protein L23a pseudogene NW_004955418 372775 373635 - 102009179 AGCD01018673 MODEL 8722001 protein-coding Chsy1 chondroitin sulfate synthase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955416 28070981 28136848 - 102019389 AGCD01017623;AGCD01017624;AGCD01017625;GBBH01135196;GBDJ01128858;XM_005381708 XP_005381765 MODEL 8855875 protein-coding Card10 caspase recruitment domain family member 10 INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); positive regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955413 23920929 23946109 - 102005023 AGCD01014340;GBDI01290875;GBDK01129378;XM_005379206;XM_013511650 XP_005379263;XP_013367104 MODEL 8809089 protein-coding LOC102009539 uncharacterized LOC102009539 NW_004955436 8518608 8525672 + 102009539 AGCD01033743;XM_013516636;XM_013516637;XM_013516638 XP_013372090;XP_013372091;XP_013372092 MODEL 8913820 ncrna LOC102003727 uncharacterized LOC102003727 NW_004955453 14568514 14584297 - 102003727 AGCD01044871;GBDF01078382;XR_262740 MODEL 9057444 protein-coding Itln1 intelectin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); oligosaccharide binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); positive regulation of protein phosphorylation (ortholog); protein homotrimerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arterial Occlusive Diseases (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN brush border membrane (ortholog); extracellular region (ortholog); membrane raft (ortholog) NW_004955468 12568465 12573663 - 102023019 AGCD01052158;GBDF01163338;XM_005400225 XP_005400282 MODEL 8820384 protein-coding LOC102011465 olfactory receptor 4D9-like NW_004955511 4030217 4031152 + 102011465 AGCD01066488;XM_005408064 XP_005408121 MODEL 8777832 protein-coding Cfap70 cilia and flagella associated protein 70 INVOLVED IN cell morphogenesis (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axonemal central apparatus (ortholog); axoneme (ortholog); ciliary basal body (ortholog) NW_004955437 18424568 18480327 + 102019431 AGCD01034791;AGCD01034792;AGCD01034793;GBDF01010702;XM_005389984;XM_005389986;XM_013516744;XM_013516745;XM_013516746;XM_013516747;XM_013516748 XP_005390041;XP_005390043;XP_013372198;XP_013372199;XP_013372200;XP_013372201;XP_013372202 MODEL 9017096 protein-coding Gpr85 G protein-coupled receptor 85 ASSOCIATED WITH autistic disorder (ortholog); Cognitive Dysfunction (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955432 19260909 19265744 - 102006702 AGCD01031176;GBDI01105800;XM_005388109;XM_013516083;XM_013516084 XP_005388166;XP_013371537;XP_013371538 MODEL 8717962 ncrna LOC102017591 uncharacterized LOC102017591 NW_004955510 6375997 6377249 - 102017591 AGCD01066306;GBDF01087880;XR_264412 MODEL 39133586 misc_rna 7SK 7SK RNA 8957094 protein-coding Cdc37 cell division cycle 37, HSP90 cochaperone ENCODES a protein that exhibits heat shock protein binding (ortholog); Hsp90 protein binding (ortholog); kinase binding (ortholog); INVOLVED IN positive regulation of type 2 mitophagy (ortholog); post-transcriptional regulation of gene expression (ortholog); protein maturation (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); HSP90-CDC37 chaperone complex (ortholog) NW_004955495 1642467 1651288 - 102005609 AGCD01061709;GBCC01025637;XM_005405600;XM_013505167 XP_005405657;XP_013360621 MODEL 8855336 protein-coding Dynll1 dynein light chain LC8-type 1 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN intraciliary retrograde transport (ortholog); mitocytosis (ortholog); motile cilium assembly (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); cardiac arrest (ortholog); FOUND IN axon cytoplasm (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955455 11148041 11150860 - 102010027 AGCD01045984;GBCB01022810;XM_005396503;XM_005396504 XP_005396560;XP_005396561 MODEL 8868655 ncrna LOC102008072 uncharacterized LOC102008072 NW_004955410 28976836 28996818 + 102008072 AGCD01011267;AGCD01011268;GBDF01307217;XR_259880 MODEL 8955044 protein-coding Bricd5 BRICHOS domain containing 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955442 15054116 15056506 + 102028586 AGCD01037856;GBDF01024331;XM_005391445;XM_005391446;XM_013517734;XM_013517735 XP_005391502;XP_005391503;XP_013373188;XP_013373189 MODEL 8866244 protein-coding LOC102006914 olfactory receptor 1N2-like NW_004955419 5391871 5392860 + 102006914 AGCD01019805;XM_005382526 XP_005382583 MODEL 9044923 protein-coding Dynll2 dynein light chain LC8-type 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); scaffold protein binding (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic dynein complex (ortholog) NW_004955451 4929186 4936027 - 102003609 AGCD01043149;GBDJ01011660;XM_005394039 XP_005394096 MODEL 8748895 protein-coding Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN glycosaminoglycan biosynthetic process (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955549 1591605 1623681 + 102011594 AGCD01072454;GBBH01012465;XM_013508540 XP_013363994 MODEL 39133888 misc_rna 7SK 7SK RNA 10163428 ncrna LOC106149914 uncharacterized LOC106149914 NW_004955457 351907 353877 + 106149914 AGCD01046708;XR_001236379 MODEL 8880421 protein-coding Ankar ankyrin and armadillo repeat containing ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955403 9132988 9174959 - 102006088 AGCD01001901;GBDF01126831;XM_005373315;XM_005373316;XM_013512359;XM_013512361;XR_001233247 XP_005373372;XP_005373373;XP_013367813;XP_013367815 MODEL 8979015 protein-coding Il1r1 interleukin 1 receptor type 1 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); heat acclimation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); aortic dissection (ortholog); Bacterial Keratitis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955470 7685498 7703374 + 102029851 AGCD01052803;GBDJ01419739;XM_005400837 XP_005400894 MODEL 8902162 protein-coding Apba1 amyloid beta precursor protein binding family A member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); gamma-aminobutyric acid secretion (ortholog); glutamate secretion (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955434 3384978 3588771 + 102004109 AGCD01032133;AGCD01032134;AGCD01032135;AGCD01032136;GBBH01045926;XM_005388560;XM_013516352;XM_013516353 XP_005388617;XP_013371806;XP_013371807 MODEL 8714280 protein-coding Ids iduronate 2-sulfatase ENCODES a protein that exhibits calcium ion binding (ortholog); iduronate-2-sulfatase activity (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan catabolic process (ortholog); glycosaminoglycan catabolic process (ortholog); heparan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH arthropathy (ortholog); Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); FOUND IN lysosomal lumen (ortholog); lysosome (ortholog) NW_004955498 1863002 1886720 - 102021366 AGCD01062752;GBCE01115350;XM_005406397 XP_005406454 MODEL 8937704 protein-coding Fbxo25 F-box protein 25 INVOLVED IN protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955403 58724206 58767637 - 102017417 AGCD01003190;AGCD01003191;GBDI01217579;XM_005373864;XM_005373865;XM_013515055 XP_005373921;XP_005373922;XP_013370509 MODEL 8988368 protein-coding Cntnap5 contactin associated protein family member 5 INVOLVED IN retina homeostasis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN fibrillar center (ortholog) NW_004955459 5312594 6122351 - 102012166 AGCD01048042;AGCD01048043;AGCD01048044;AGCD01048045;AGCD01048046;AGCD01048047;AGCD01048048;AGCD01048049;AGCD01048050;AGCD01048051;AGCD01048052;AGCD01048053;AGCD01048054;AGCD01048055;AGCD01048056;AGCD01048057;AGCD01048058;AGCD01048059;AGCD01048060;GBBH01013110;XM_013521091 XP_013376545 MODEL 8818875 protein-coding Eftud2 elongation factor Tu GTP binding domain containing 2 INVOLVED IN cellular response to xenobiotic stimulus (ortholog); mRNA splicing, via spliceosome (ortholog); response to cocaine (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog) NW_004955451 17655659 17690117 - 102020875 AGCD01043765;AGCD01043766;AGCD01043767;GBBH01001764;XM_005394553 XP_005394610 MODEL 39131813 rrna 5S_rRNA 5S ribosomal RNA 9009826 protein-coding Ccng2 cyclin G2 INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955433 1799405 1807050 + 102016188 AGCD01031371;GBDF01154081;GBDF01154083;XM_013516284 XP_013371738 MODEL 8720377 pseudo LOC102006553 CAP-Gly domain-containing linker protein 1 pseudogene NW_004955463 5125915 5126991 - 102006553 AGCD01049632 MODEL 39134287 misc_rna 7SK 7SK RNA 39134013 misc_rna 7SK 7SK RNA 8932790 protein-coding Ca8 carbonic anhydrase 8 (inactive) INVOLVED IN positive regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 34 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955444 18414006 18510800 + 102015251 AGCD01039238;AGCD01039239;AGCD01039240;AGCD01039241;AGCD01039242;GBCE01129803;GBDJ01215247;XM_013518186 XP_013373640 MODEL 8958249 pseudo LOC102021677 40S ribosomal protein S6 pseudogene NW_004955422 2919897 2921786 - 102021677 AGCD01022495 MODEL 8945055 ncrna LOC102004451 uncharacterized LOC102004451 NW_004955406 7310932 7332321 + 102004451 AGCD01005768;AGCD01005769;XR_001236295;XR_259483;XR_259484 MODEL 8758761 ncrna LOC102005477 uncharacterized LOC102005477 NW_004955420 14717038 14721487 + 102005477 AGCD01020954;GBBH01152513;XR_260717 MODEL 39132267 rrna 5S_rRNA 5S ribosomal RNA 8852299 protein-coding Lhpp phospholysine phosphohistidine inorganic pyrophosphate phosphatase ENCODES a protein that exhibits inorganic diphosphate phosphatase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN phosphate-containing compound metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955477 2480660 2606887 + 102003234 AGCD01055523;AGCD01055524;AGCD01055525;GBDI01228294;XM_005401973 XP_005402030 MODEL 8946846 protein-coding Adprhl1 ADP-ribosylhydrolase like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog) NW_004955404 494185 512295 + 102005215 AGCD01003202;GBCE01042504;XM_005373948;XM_005373949 XP_005374005;XP_005374006 MODEL 8998848 pseudo LOC102011081 SH3 domain-binding glutamic acid-rich-like protein pseudogene NW_004955406 24054455 24054920 + 102011081 AGCD01006188 MODEL 8968662 protein-coding Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN intracellular chloride ion homeostasis (ortholog); negative regulation of delayed rectifier potassium channel activity (ortholog); negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Brugada syndrome (ortholog); FOUND IN basolateral part of cell (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955414 17166537 17200385 + 102007421 AGCD01015234;AGCD01015235;GBBH01198236;XM_005379918;XM_005379919;XM_005379920;XM_005379922;XM_005379923;XM_013511942;XR_001233141 XP_005379975;XP_005379976;XP_005379977;XP_005379979;XP_005379980;XP_013367396 MODEL 8796740 pseudo LOC102010312 transcription and mRNA export factor ENY2 pseudogene NW_004955553 1476433 1476725 - 102010312 AGCD01072886 MODEL 8738700 protein-coding Cela1 chymotrypsin like elastase 1 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN digestive system development (ortholog); elastin catabolic process (ortholog); exocrine pancreas development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955547 1810680 1823938 - 102025291 AGCD01072247;GBBH01071457;XM_005411908 XP_005411965 MODEL 8710784 protein-coding Itm2a integral membrane protein 2A INVOLVED IN plasma cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955557 2235223 2243911 - 102025950 AGCD01073326;AGCD01073327;GBCQ01150407;XM_005412649;XM_013508828;XM_013508829;XM_013508830;XM_013508831 XP_005412706;XP_013364282;XP_013364283;XP_013364284;XP_013364285 MODEL 9038957 protein-coding Atp2b3 ATPase plasma membrane Ca2+ transporting 3 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); PDZ domain binding (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); neural retina development (ortholog); regulation of cytosolic calcium ion concentration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); parallel fiber (ortholog) NW_004955580 286092 332657 + 102011378 AGCD01075594;AGCD01075595;AGCD01075596;GBCB01000157;XM_013509708;XM_013509709;XM_013509710 XP_013365162;XP_013365163;XP_013365164 MODEL 8872281 protein-coding Ccdc167 coiled-coil domain containing 167 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lymphoma (ortholog) NW_004955437 5707236 5720541 + 102018436 AGCD01034397;GBCQ01033283;XM_005389616 XP_005389673 MODEL 8836384 protein-coding LOC102017598 metallothionein-I, hippocampal-like NW_004955433 14372766 14374000 + 102017598 AGCD01031721;GBDF01147217;XM_005388356 XP_005388413 MODEL 8901470 protein-coding LOC102012708 uncharacterized LOC102012708 NW_004955449 15463379 15557849 - 102012708 AGCD01042194;AGCD01042195;AGCD01042196;AGCD01042197;GBDK01148150;XM_005393396;XM_005393397;XR_001235813;XR_001235814;XR_262508;XR_262509 XP_005393453;XP_005393454 MODEL 9016103 protein-coding Actrt1 actin related protein T1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); regulation of smoothened signaling pathway (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955473 6849016 6850445 + 102016586 AGCD01054010;GBDF01120547;XM_005401271 XP_005401328 MODEL 8798355 protein-coding Trim29 tripartite motif containing 29 ENCODES a protein that exhibits identical protein binding (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of protein localization to nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosome (ortholog) NW_004955412 21134076 21158982 - 102010139 AGCD01013018;GBCE01037365;XM_005378344;XM_013511251 XP_005378401;XP_013366705 MODEL 8783146 protein-coding Eras ES cell expressed Ras NW_004955543 381756 383093 + 102026258 AGCD01071579;XM_005415247 XP_005415304 MODEL 8955236 protein-coding Gclc glutamate-cysteine ligase catalytic subunit ENCODES a protein that exhibits ADP binding (ortholog); glutamate binding (ortholog); glutamate-cysteine ligase activity (ortholog); INVOLVED IN response to auditory stimulus; blood vessel diameter maintenance (ortholog); cell redox homeostasis (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; cysteine metabolic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); cataract (ortholog); FOUND IN cytosol (ortholog); glutamate-cysteine ligase complex (ortholog) NW_004955411 2593523 2617553 + 102009808 AGCD01011514;GBCE01117484;XM_005377605 XP_005377662 MODEL 8794498 protein-coding Brinp1 BMP/retinoic acid inducible neural specific 1 INVOLVED IN behavioral fear response (ortholog); brain development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955419 8529213 8704113 + 102029398 AGCD01019899;AGCD01019900;GBBH01200609;XM_005382605 XP_005382662 MODEL 39134016 misc_rna 7SK 7SK RNA 8804866 protein-coding LOC102006916 olfactory receptor 13F1 NW_004955419 21914434 21915393 - 102006916 AGCD01020292;XM_005382939 XP_005382996 MODEL 39133889 misc_rna 7SK 7SK RNA 8792392 ncrna LOC102008437 uncharacterized LOC102008437 NW_004955501 6949506 6954792 - 102008437 AGCD01064202;GBDF01210166;XR_264256 MODEL 9053072 protein-coding Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN circadian rhythm (ortholog); glycosaminoglycan biosynthetic process (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH colon cancer (ortholog); lung cancer (ortholog); lung non-small cell carcinoma (ortholog) NW_004955493 1451960 1545156 + 102019282 AGCD01060895;AGCD01060896;GBDF01048807;XM_005405090 XP_005405147 MODEL 9016345 protein-coding Chsy3 chondroitin sulfate synthase 3 ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955415 2748776 2994041 + 102024331 AGCD01015916;AGCD01015917;AGCD01015918;AGCD01015919;AGCD01015920;AGCD01015921;GBCE01168857;GBDF01182882;XM_013512391 XP_013367845 MODEL 9032521 protein-coding Il1r2 interleukin 1 receptor type 2 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of interleukin-1 alpha production (ortholog); negative regulation of interleukin-1-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aggressive periodontitis (ortholog); allergic disease (ortholog); FOUND IN cytoplasm (ortholog); interleukin-1 receptor complex (ortholog) NW_004955470 7518565 7562219 + 102018381 AGCD01052798;AGCD01052799;AGCD01052800;GBBH01144026;XM_005400763;XM_005400764;XM_005400766;XM_013522801;XM_013522802;XM_013522803;XR_001237023 XP_005400820;XP_005400821;XP_005400823;XP_013378255;XP_013378256;XP_013378257 MODEL 8709853 protein-coding LOC102009550 olfactory receptor 5AU1 NW_004955550 1921231 1923589 - 102009550 AGCD01072598;XM_013508583 XP_013364037 MODEL 8705691 ncrna LOC102003728 uncharacterized LOC102003728 NW_004955454 12328311 12330494 + 102003728 AGCD01045409;XR_262791 MODEL 8905045 protein-coding Card11 caspase recruitment domain family member 11 ENCODES a protein that exhibits CARD domain binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); agammaglobulinemia (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); immunological synapse (ortholog) NW_004955460 12368987 12487675 + 102010560 AGCD01048657;AGCD01048658;GBBH01126313;XM_005397859;XM_005397860;XM_005397861;XM_013521265;XM_013521266;XM_013521268;XM_013521269;XM_013521270;XM_013521271 XP_005397916;XP_005397917;XP_005397918;XP_013376719;XP_013376720;XP_013376722;XP_013376723;XP_013376724;XP_013376725 MODEL 8950512 protein-coding Akr1a1 aldo-keto reductase family 1 member A1 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); aldose reductase (NADPH) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN aldehyde catabolic process (ortholog); cellular detoxification of aldehyde (ortholog); D-glucuronate catabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; prostaglandin biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); synapse (ortholog) NW_004955464 12715238 12729034 - 102028510 AGCD01050220;AGCD01050221;GBCQ01009224;XM_005398702;XM_013521760 XP_005398759;XP_013377214 MODEL 8966494 protein-coding Cfap73 cilia and flagella associated protein 73 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955482 9486245 9493876 + 102007997 AGCD01057573;AGCD01057574;GBBH01003993;GBBH01004004;XM_013503588;XM_013503589;XM_013503590 XP_013359042;XP_013359043;XP_013359044 MODEL 9017176 protein-coding LOC102011468 carnosine N-methyltransferase NW_004955512 4044108 4112888 + 102011468 AGCD01066722;AGCD01066723;AGCD01066724;AGCD01066725;AGCD01066726;AGCD01066727;AGCD01066728;AGCD01066729;GBCE01103835;GBDF01121011;XM_013506528 XP_013361982 MODEL 8761661 protein-coding Cntrl centriolin INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centrosome (ortholog); meiotic spindle (ortholog) NW_004955419 6814525 6892466 - 102019810 AGCD01019865;AGCD01019866;GBDI01218293;XM_005382575;XM_013513187 XP_005382632;XP_013368641 MODEL 39133588 misc_rna 7SK 7SK RNA 8880699 protein-coding Clint1 clathrin interactor 1 ENCODES a protein that exhibits clathrin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); Golgi apparatus (ortholog) NW_004955408 11904030 11963611 - 102018061 AGCD01008320;GBCC01021736;XM_005376244;XM_013508832 XP_005376301;XP_013364286 MODEL 8705786 pseudo LOC102008073 39S ribosomal protein L47, mitochondrial pseudogene NW_004955411 8554284 8555056 + 102008073 AGCD01011730 MODEL 8862013 pseudo LOC102004452 60S ribosomal protein L31 pseudogene NW_004955453 3310962 3311426 + 102004452 AGCD01044654;XM_005395701 MODEL 8781238 protein-coding LOC102009182 zinc finger protein 709-like NW_004955483 60152 101435 + 102009182 AGCD01057595;AGCD01057596;AGCD01057597;AGCD01057598;XM_005403269;XM_013503758 XP_005403326;XP_013359212 MODEL 10309232 ncrna LOC106149915 uncharacterized LOC106149915 NW_004955457 14777601 14826076 + 106149915 AGCD01047083;AGCD01047084;XR_001236380 MODEL 8766081 protein-coding Cdc37l1 cell division cycle 37 like 1, HSP90 cochaperone ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955434 8969289 8996921 + 102026786 AGCD01032282;GBBH01089675;XM_005388645 XP_005388702 MODEL 8944969 protein-coding Lhx1 LIM homeobox 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); anterior/posterior axis specification (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Female Urogenital Diseases (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) NW_004955451 1037936 1048501 - 102028487 AGCD01042958;GBCQ01073234;XM_005393940 XP_005393997 MODEL 8835525 protein-coding Ankdd1a ankyrin repeat and death domain containing 1A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog) NW_004955450 10630303 10651918 - 102014514 AGCD01042627;AGCD01042628;GBDF01278959;XM_005393745;XM_005393746 XP_005393802;XP_005393803 MODEL 8815456 protein-coding Fbxo27 F-box protein 27 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) NW_004955468 520321 525051 + 102028946 AGCD01051710;GBCB01060909;GBDJ01318098;XM_013522545 XP_013377999 MODEL 8940189 protein-coding Idua alpha-L-iduronidase ENCODES a protein that exhibits L-iduronidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); bone development (ortholog); ASSOCIATED WITH amblyopia (ortholog); aortic valve disease 2 (ortholog); aortic valve stenosis (ortholog); FOUND IN extracellular region (ortholog); lysosomal lumen (ortholog); lysosome (ortholog) NW_004955514 474830 488007 + 102011470 AGCD01067011;AGCD01067012;GBCE01171800;GBDJ01321944;XM_005408686 XP_005408743 MODEL 8884290 protein-coding Egf epidermal growth factor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; ceramide signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN extracellular exosome (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955496 325954 401430 - 102024024 AGCD01062225;GBCQ01008809;XM_005406183;XM_013505425 XP_005406240;XP_013360879 MODEL 9059206 protein-coding Ccnh cyclin H ENCODES a protein that exhibits kinase activity (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN protein stabilization (ortholog); regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); nucleoplasm (ortholog) NW_004955418 23790398 23807509 + 102007432 AGCD01019313;GBDK01144676;XM_005382297 XP_005382354 MODEL 8976113 protein-coding Cela3b chymotrypsin like elastase 3B ASSOCIATED WITH cervical cancer (ortholog); exocrine pancreatic insufficiency (ortholog); uterine carcinosarcoma (ortholog) NW_004955452 2190177 2194453 + 102012274 AGCD01043880;GBBH01077125;XM_013519470 XP_013374924 MODEL 8969224 protein-coding LOC102006556 histone H3.1 NW_004955465 13374516 13388289 + 102006556 AGCD01050605;AGCD01050606;AGCD01050607;GBDJ01218778;XM_013521798;XM_013521799 XP_013377252;XP_013377253 MODEL 9036921 protein-coding Ca9 carbonic anhydrase 9 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); molecular function activator activity (ortholog); zinc ion binding (ortholog); INVOLVED IN morphogenesis of an epithelium (ortholog); response to hypoxia (ortholog); response to testosterone (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Anaplasia (ortholog); breast carcinoma (ortholog); chronic myelogenous leukemia, BCR-ABL1 positive (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955472 619084 625570 - 102010361 AGCD01053342;AGCD01053343;GBCB01065795;XM_005401177 XP_005401234 MODEL 8932661 protein-coding LOC102005483 olfactory receptor 4B1-like NW_004955422 365286 366218 - 102005483 AGCD01022404;XM_005384937 XP_005384994 MODEL 8780812 protein-coding Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calmodulin binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955406 39552034 39645694 + 102013048 AGCD01006631;AGCD01006632;GBBH01025079;XM_005375268;XM_005375269;XM_005375270;XM_013522622;XM_013522634 XP_005375325;XP_005375326;XP_005375327;XP_013378076;XP_013378088 MODEL 8816927 protein-coding Dynlrb1 dynein light chain roadblock-type 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to light stimulus (ortholog); visual behavior (ortholog); PARTICIPATES IN mitochondria transport pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955422 26787879 26807901 - 102022713 AGCD01023303;GBCQ01008485;XM_005384828;XM_005384829;XM_005384830 XP_005384885;XP_005384886;XP_005384887 MODEL 9049819 protein-coding Dglucy D-glutamate cyclase ENCODES a protein that exhibits D-glutamate cyclase activity (ortholog); INVOLVED IN glutamate metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955438 13440883 13554969 + 102015449 AGCD01035286;AGCD01035287;AGCD01035288;AGCD01035289;AGCD01035290;AGCD01035291;AGCD01035292;AGCD01081645;GBCQ01129162;XM_013517220;XM_013517221;XM_013517222 XP_013372674;XP_013372675;XP_013372676 MODEL 9040604 protein-coding Trim3 tripartite motif containing 3 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of toll-like receptor 3 signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); ASSOCIATED WITH autistic disorder (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); glutamatergic synapse (ortholog) NW_004955414 22181999 22207244 - 102021962 AGCD01015448;GBCE01154433;XM_005380144;XM_005380145;XM_005380146 XP_005380201;XP_005380202;XP_005380203 MODEL 8885744 protein-coding Apba2 amyloid beta precursor protein binding family A member 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); in utero embryonic development (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); presynapse (ortholog); Schaffer collateral - CA1 synapse (ortholog) NW_004955416 29390601 29591815 - 102014778 AGCD01017655;AGCD01017656;AGCD01017657;GBDJ01028472;XM_005381659;XM_005381660;XM_013512683 XP_005381716;XP_005381717;XP_013368137 MODEL 8850818 protein-coding Chtf18 chromosome transmission fidelity factor 18 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN cell development (ortholog); male meiotic nuclear division (ortholog); negative regulation of chromosome segregation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955442 16414564 16423386 - 102014715 AGCD01037900;GBDF01192967;XM_005391601;XM_013517865 XP_005391658;XP_013373319 MODEL 8950621 protein-coding Hs3st4 heparan sulfate-glucosamine 3-sulfotransferase 4 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); lung squamous cell carcinoma (ortholog); thymoma (ortholog) NW_004955493 4230929 4453508 + 102004613 AGCD01061026;AGCD01061027;AGCD01061028;AGCD01061029;AGCD01061030;AGCD01061031;GBCQ01057566;XM_005405131 XP_005405188 MODEL 39131814 rrna 5S_rRNA 5S ribosomal RNA 8927963 ncrna LOC102010314 uncharacterized LOC102010314 NW_004955555 108802 119271 + 102010314 AGCD01073024;GBBH01226678;XR_264947;XR_264948 MODEL 8859876 protein-coding Gpr87 G protein-coupled receptor 87 ENCODES a protein that exhibits G protein-coupled purinergic nucleotide receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog) NW_004955448 2403188 2424209 - 102029457 AGCD01041282;GBDI01322143;XM_005393022;XM_005393023 XP_005393079;XP_005393080 MODEL 8879661 pseudo LOC102017599 phosphatidylinositol-glycan biosynthesis class F protein pseudogene NW_004955525 636451 637094 - 102017599 AGCD01069002 MODEL 8896292 ncrna LOC102004079 uncharacterized LOC102004079 NW_004955493 3577628 3582021 + 102004079 AGCD01061001;XR_264080 MODEL 8802559 protein-coding Egfl6 EGF like domain multiple 6 INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog) NW_004955519 4557007 4616095 - 102027780 AGCD01067986;AGCD01067987;AGCD01067988;GBDJ01301779;XM_005409208 XP_005409265 MODEL 39133599 misc_rna 7SK 7SK RNA 8710156 pseudo LOC102021679 zinc finger CCHC domain-containing protein 7-like NW_004955492 3567660 3571346 + 102021679 AGCD01060698 MODEL 8714119 pseudo LOC102012709 40S ribosomal protein S29 pseudogene NW_004955587 108587 108779 - 102012709 AGCD01076058 MODEL 39132268 rrna 5S_rRNA 5S ribosomal RNA 8925412 protein-coding LOC102006931 uncharacterized LOC102006931 NW_004955423 27013477 27045496 - 102006931 AGCD01024112;AGCD01024113;GBCB01041473;GBCB01041476;XM_013514386 XP_013369840 MODEL 39133890 misc_rna 7SK 7SK RNA 8902344 pseudo LOC102011085 dynein light chain 1, cytoplasmic-like NW_004955407 27230910 27231275 + 102011085 AGCD01007548 MODEL 9016046 pseudo LOC102008438 CDC42 small effector protein 1 pseudogene NW_004955503 2028864 2063030 - 102008438 AGCD01064593;AGCD01064594 MODEL 8745207 protein-coding Cntrob centrobin, centriole duplication and spindle assembly protein ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN centriole replication (ortholog); centrosome separation (ortholog); mitotic cytokinetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955467 8993528 9010829 - 102027160 AGCD01051481;GBDF01051621;XM_005399444;XM_005399445;XM_005399447;XM_013522244;XM_013522245;XM_013522246;XM_013522247 XP_005399501;XP_005399502;XP_005399504;XP_013377698;XP_013377699;XP_013377700;XP_013377701 MODEL 8878951 protein-coding Abhd3 abhydrolase domain containing 3, phospholipase ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN phosphatidylcholine metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955402 10316881 10355760 - 102018874 AGCD01000262;AGCD01000263;GBBH01092371;GBCE01099406;XM_013520539 XP_013375993 MODEL 8817975 pseudo LOC102009551 ATP synthase F(0) complex subunit C1, mitochondrial pseudogene NW_004955442 7881091 7881501 + 102009551 AGCD01037628 MODEL 9003734 ncrna LOC102003731 uncharacterized LOC102003731 NW_004955407 34830164 34933219 - 102003731 AGCD01007727;AGCD01007728;GBDF01191929;XR_259609 MODEL 9057371 protein-coding Card14 caspase recruitment domain family member 14 ENCODES a protein that exhibits CARD domain binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955506 2711061 2744555 - 102019189 AGCD01065301;GBCE01013164;XM_013505979;XM_013505980;XM_013505981;XM_013505982;XM_013505983;XM_013505984;XM_013505985;XM_013505986;XM_013505987;XM_013505988 XP_013361433;XP_013361434;XP_013361435;XP_013361436;XP_013361437;XP_013361438;XP_013361439;XP_013361440;XP_013361441;XP_013361442 MODEL 8849575 protein-coding Adprm ADP-ribose/CDP-alcohol diphosphatase, manganese dependent ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); CDP-glycerol diphosphatase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955467 6505957 6519823 - 102030403 AGCD01051416;GBCQ01154845;XM_005399358;XM_005399359 XP_005399415;XP_005399416 MODEL 39134289 misc_rna 7SK 7SK RNA 9026781 protein-coding LOC102004456 keratin-associated protein 20-2-like NW_004955407 30031156 30031311 - 102004456 AGCD01007623;XM_005375633 XP_005375690 MODEL 8892272 protein-coding Brinp2 BMP/retinoic acid inducible neural specific 2 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); locomotion (ortholog); ASSOCIATED WITH oral squamous cell carcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955406 16748824 16840924 + 102018683 AGCD01006000;GBDJ01100677;XM_005374909 XP_005374966 MODEL 9000044 protein-coding Akr1d1 aldo-keto reductase family 1 member D1 ENCODES a protein that exhibits 3-oxo-5-beta-steroid 4-dehydrogenase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); bile acid biosynthetic process (ortholog); C21-steroid hormone metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); congenital bile acid synthesis defect (ortholog); congenital bile acid synthesis defect 2 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955494 4799706 4856100 - 102005608 AGCD01061511;AGCD01061512;GBCQ01005906;XM_005405462 XP_005405519 MODEL 8900184 protein-coding Ccni cyclin I ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear membrane (ortholog) NW_004955433 1698568 1735196 - 102015339 AGCD01031366;GBCB01005241;GBCE01000586;XM_005388188 XP_005388245 MODEL 8786646 protein-coding Kcne4 potassium voltage-gated channel subfamily E regulatory subunit 4 ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); transmembrane transporter binding (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955453 10822977 10826191 - 102022043 AGCD01044790;GBDK01027779;XM_005395490 XP_005395547 MODEL 8846359 protein-coding LOC102008077 olfactory receptor 8B3 NW_004955412 25357388 25358344 - 102008077 AGCD01013151;XM_005378420 XP_005378477 MODEL 8789629 protein-coding Erbb2 erb-b2 receptor tyrosine kinase 2 ENCODES a protein that exhibits coreceptor activity (ortholog); ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); INVOLVED IN axon regeneration (ortholog); cell population proliferation (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; endometrial cancer pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); amblyopia (ortholog); FOUND IN cell projection; apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955451 14442816 14456009 + 102029927 AGCD01043554;GBDF01303586;XM_005394319 XP_005394376 MODEL 8912089 protein-coding Celf1 CUGBP Elav-like family member 1 ENCODES a protein that exhibits BRE binding (ortholog); lncRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN cellular response to polyamine macromolecule (ortholog); cerebral cortex development (ortholog); cerebral cortex neuron differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleoplasm (ortholog) NW_004955422 742017 817649 + 102019180 AGCD01022435;AGCD01022436;AGCD01022437;GBDF01120279;XM_005383961;XM_013514126;XM_013514127;XM_013514128;XM_013514129;XM_013514130;XM_013514131;XM_013514132;XM_013514133 XP_005384018;XP_013369580;XP_013369581;XP_013369582;XP_013369583;XP_013369584;XP_013369585;XP_013369586;XP_013369587 MODEL 39134018 misc_rna 7SK 7SK RNA 8750443 protein-coding Gclm glutamate-cysteine ligase modifier subunit ENCODES a protein that exhibits glutamate-cysteine ligase activity (ortholog); glutamate-cysteine ligase catalytic subunit binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); blood vessel diameter maintenance (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; cysteine metabolic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH berylliosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Liver Injury (ortholog); FOUND IN glutamate-cysteine ligase complex (ortholog) NW_004955423 782468 805384 + 102011455 AGCD01023420;AGCD01023421;GBBH01187846;XM_005385004 XP_005385061 MODEL 8921188 protein-coding Dynlrb2 dynein light chain roadblock-type 2 PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic dynein complex (ortholog) NW_004955522 3353087 3364276 + 102027668 AGCD01068381;GBCQ01069321;XM_005409345 XP_005409402 MODEL 9062220 ncrna LOC102009188 uncharacterized LOC102009188 NW_004955420 29161260 29164099 + 102009188 AGCD01021493;GBDJ01119670;XR_260772 MODEL 8801313 protein-coding Il1rap interleukin 1 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-1 receptor activity (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-33-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Disease Progression (ortholog); FOUND IN glutamatergic synapse (ortholog); interleukin-1 receptor complex (ortholog); protein-containing complex (ortholog) NW_004955420 17463493 17591054 - 102014674 AGCD01021022;AGCD01021023;AGCD01021024;GBDK01278591;XM_005383222;XM_013513507;XM_013513508;XM_013513509;XM_013513510 XP_005383279;XP_013368961;XP_013368962;XP_013368963;XP_013368964 MODEL 8726437 protein-coding Lhx2 LIM homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); axon extension (ortholog); axon guidance (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Gait Ataxia (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleus (ortholog) NW_004955419 3999364 4019543 - 102025581 AGCD01019745;AGCD01019746;AGCD01019747;GBBH01168279;GBDF01257508;XM_005382498 XP_005382555 MODEL 8719785 pseudo LOC102008440 high mobility group protein B1-like NW_004955427 3052920 3061332 - 102008440 AGCD01026912 MODEL 8874550 protein-coding Cfap74 cilia and flagella associated protein 74 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) NW_004955486 9056836 9107572 + 102011773 AGCD01059161;AGCD01059162;GBDF01054014;XM_005404188;XM_013504226;XM_013504227;XM_013504228;XM_013504229;XM_013504230;XM_013504231;XM_013504232;XM_013504233;XM_013504234;XM_013504235;XM_013504236;XM_013504237;XM_013504238;XR_001231114;XR_001231115;XR_001231116 XP_005404245;XP_013359680;XP_013359681;XP_013359682;XP_013359683;XP_013359684;XP_013359685;XP_013359686;XP_013359687;XP_013359688;XP_013359689;XP_013359690;XP_013359691;XP_013359692 MODEL 8847881 protein-coding Ier2 immediate early response 2 INVOLVED IN cell motility (ortholog); neuron differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH childhood acute myeloid leukemia (ortholog); colorectal adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 32159762 32161530 + 102030303 AGCD01016712;GBDK01079819;XM_005381057 XP_005381114 MODEL 8707218 pseudo LOC102011469 60S ribosomal protein L36a-like NW_004955431 5509247 5509567 - 102011469 AGCD01030034 MODEL 8968943 protein-coding LOC102017606 olfactory receptor 11G2-like NW_004955550 856201 857148 + 102017606 AGCD01072527;XM_005412038 XP_005412095 MODEL 8874215 protein-coding Actrt2 actin related protein T2 ASSOCIATED WITH Keloid (ortholog) NW_004955486 8465523 8466841 - 102030637 AGCD01059151;GBDF01008181;XM_005404155 XP_005404212 MODEL 8921636 protein-coding Ccdc169 coiled-coil domain containing 169 NW_004955431 9794294 9852944 + 102030458 AGCD01030194;AGCD01030195;GBDF01006343;XM_005387687;XM_005387688;XM_013515882 XP_005387744;XP_005387745;XP_013371336 MODEL 10246395 ncrna LOC106149916 uncharacterized LOC106149916 NW_004955457 515882 533018 - 106149916 AGCD01046711;XR_001236381 MODEL 8768937 protein-coding LOC102006557 putative olfactory receptor 2W6 NW_004955465 13441807 13444827 + 102006557 AGCD01050609;XM_005399012 XP_005399069 MODEL 8700974 pseudo LOC102005496 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955433 1844022 1845319 - 102005496 AGCD01031371 MODEL 8739258 protein-coding Caap1 caspase activity and apoptosis inhibitor 1 INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955472 7937702 7993252 + 102027966 AGCD01053635;AGCD01053636;AGCD01053637;GBBH01101942;GBDF01086677;XM_013523025 XP_013378479 MODEL 39132271 rrna 5S_rRNA 5S ribosomal RNA 9061457 protein-coding Atp2c1 ATPase secretory pathway Ca2+ transporting 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); calcium ion transport (ortholog); calcium-dependent cell-cell adhesion (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cis-Golgi network membrane (ortholog); Golgi apparatus (ortholog); Golgi cisterna membrane (ortholog) NW_004955501 7382657 7519789 - 102010386 AGCD01064214;AGCD01064215;AGCD01064216;GBDK01089522;XM_005406844;XM_013505732;XM_013505734 XP_005406901;XP_013361186;XP_013361188 MODEL 8943180 protein-coding Trim32 tripartite motif containing 32 ENCODES a protein that exhibits identical protein binding (ortholog); myosin binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin ubiquitination (ortholog); antiviral innate immune response (ortholog); autophagosome assembly (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 11 (ortholog); FOUND IN autophagosome (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955419 11151751 11168046 - 102003875 AGCD01019953;GBDF01241008;XM_005382612;XM_005382613;XM_005382614;XM_005382615;XM_005382616;XM_013513264 XP_005382669;XP_005382670;XP_005382671;XP_005382672;XP_005382673;XP_013368718 MODEL 9000410 protein-coding Cdc40 cell division cycle 40 INVOLVED IN embryonic brain development (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955411 34966797 35007577 + 102021861 AGCD01012418;GBDF01222886;XM_005377882 XP_005377939 MODEL 8707882 protein-coding LOC102011087 olfactory receptor 9K2-like NW_004955458 2223510 2224451 + 102011087 AGCD01047218;XM_005397237 XP_005397294 MODEL 8909699 protein-coding Apba3 amyloid beta precursor protein binding family A member 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); in utero embryonic development (ortholog); negative regulation of catalytic activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955495 5647274 5654634 - 102012873 AGCD01062017;AGCD01062018;AGCD01062019;GBCE01170764;GBDI01115253;XM_013505233 XP_013360687 MODEL 8788740 protein-coding Ankdd1b ankyrin repeat and death domain containing 1B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); sarcoma (ortholog) NW_004955425 25094742 25154497 - 102023498 AGCD01025909;AGCD01025910;GBDJ01041314;XM_005386046;XM_013514785;XM_013514786;XM_013514787;XM_013514788 XP_005386103;XP_013370239;XP_013370240;XP_013370241;XP_013370242 MODEL 39131815 rrna 5S_rRNA 5S ribosomal RNA 8756057 protein-coding Chtf8 chromosome transmission fidelity factor 8 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN positive regulation of DNA-directed DNA polymerase activity (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); nucleus (ortholog) NW_004955484 7539887 7542395 + 102004606 AGCD01058337;GBCE01097337;XM_013503977 XP_013359431 MODEL 8992031 protein-coding Gpr88 G protein-coupled receptor 88 ENCODES a protein that exhibits beta2-adrenergic receptor activity (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH Childhood-Onset Chorea with Psychomotor Retardation (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955435 5268746 5271237 + 102023189 AGCD01032879;AGCD01032880;GBDI01344475;XM_005389100 XP_005389157 MODEL 8967801 protein-coding Card19 caspase recruitment domain family member 19 INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955515 4910621 4923815 - 102025036 AGCD01067332;AGCD01067333;GBCQ01122105;XM_005408899;XM_013506882 XP_005408956;XP_013362336 MODEL 39134291 misc_rna 7SK 7SK RNA 8882910 protein-coding LOC102009553 chromosome unknown open reading frame, human C16orf91 ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955442 15820684 15821784 + 102009553 AGCD01037879;GBDF01189237;XM_005391583 XP_005391640 MODEL 8846121 protein-coding Clip1 CAP-Gly domain containing linker protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); positive regulation of dendrite development (ortholog); positive regulation of microtubule polymerization (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 16 (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic microtubule (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955482 6213363 6330601 + 102030634 AGCD01057382;AGCD01057383;AGCD01057384;AGCD01057385;AGCD01057386;GBDK01141884;XM_005403080;XM_005403081;XM_005403082;XM_005403083;XM_005403084;XM_005403085;XM_005403086;XM_005403087;XM_005403088;XM_005403089;XM_005403090;XM_005403091;XM_005403092;XM_005403093;XM_005403094;XM_013503650 XP_005403137;XP_005403138;XP_005403139;XP_005403140;XP_005403141;XP_005403142;XP_005403143;XP_005403144;XP_005403145;XP_005403146;XP_005403147;XP_005403148;XP_005403149;XP_005403150;XP_005403151;XP_013359104 MODEL 9021585 protein-coding Akr1e2 aldo-keto reductase family 1 member E2 ENCODES a protein that exhibits 1,5-anhydro-D-fructose reductase activity (ortholog); oxidoreductase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955429 714843 731285 - 102025823 AGCD01028373;GBBH01198200;XM_005386865 XP_005386922 MODEL 10337370 protein-coding Ccni2 cyclin I family member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955408 4126198 4129209 + 106147197 AGCD01008088;AGCD01008089;GBBH01151981;XM_013507374 XP_013362828 MODEL 8754735 protein-coding Egfl7 EGF like domain multiple 7 ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN blood vessel development (ortholog); negative regulation of cell migration (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955513 4145059 4154918 - 102004191 AGCD01066922;AGCD01066923;GBDI01006336;XM_005408482;XM_005408483;XM_013506698;XM_013506699;XM_013506700 XP_005408539;XP_005408540;XP_013362152;XP_013362153;XP_013362154 MODEL 39133661 misc_rna 7SK 7SK RNA 8932772 pseudo LOC102012710 GTP:AMP phosphotransferase AK3, mitochondrial pseudogene NW_004955402 34583997 34587079 + 102012710 AGCD01000866 MODEL 9026258 ncrna LOC102021680 uncharacterized LOC102021680 NW_004955422 20177741 20191497 - 102021680 AGCD01023068;GBDF01306760;XR_001234025;XR_001234026;XR_001234027;XR_001234028 MODEL 8737225 protein-coding Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); cardiac muscle contraction (ortholog); negative regulation of potassium ion export across plasma membrane (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955490 6242197 6243627 + 102010910 AGCD01060218;GBDJ01215707;XM_005404665 XP_005404722 MODEL 8894547 protein-coding Dguok deoxyguanosine kinase ENCODES a protein that exhibits deoxyadenosine kinase activity (ortholog); deoxyguanosine kinase activity (ortholog); deoxynucleoside kinase activity (ortholog); INVOLVED IN dAMP salvage (ortholog); dGTP metabolic process (ortholog); mitochondrial ATP synthesis coupled electron transport (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH anxiety disorder (ortholog); autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955424 11739904 11773884 - 102007350 AGCD01024573;AGCD01024574;GBDI01313341;XM_005385533;XM_005385534 XP_005385590;XP_005385591 MODEL 8897015 protein-coding LOC102003733 E3 ubiquitin-protein ligase TRIM50 NW_004955456 14320894 14328341 + 102003733 AGCD01046639;GBDF01267146;XM_005396793;XM_005396795;XM_013520599 XP_005396850;XP_005396852;XP_013376053 MODEL 8756139 ncrna LOC102008079 uncharacterized LOC102008079 NW_004955413 2802254 2809284 + 102008079 AGCD01013559;GBCB01093657;XR_001233052;XR_260052 MODEL 8961889 protein-coding LOC102010318 seminal vesicle major clotting proteins-like NW_004955445 12149377 12156385 - 102010318 AGCD01039740;AGCD01039741;AGCD01039742;XM_005392442 XP_005392499 MODEL 8895105 protein-coding Coasy Coenzyme A synthase ENCODES a protein that exhibits dephospho-CoA kinase activity (ortholog); pantetheine-phosphate adenylyltransferase activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway; ASSOCIATED WITH anxiety disorder (ortholog); Arachnoid Cysts (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog) NW_004955451 16457707 16460631 + 102027933 AGCD01043679;GBCB01056819;GBCB01056823;XM_005394631 XP_005394688 MODEL 8999355 pseudo LOC102004458 protein regulator of cytokinesis 1 pseudogene NW_004955408 33268665 33270602 + 102004458 AGCD01008866 MODEL 8842892 pseudo LOC102004081 cationic trypsin-3-like NW_004955494 1233143 1236496 + 102004081 AGCD01061392 MODEL 8714068 protein-coding LOC102011483 tryptase-like NW_004955442 16039127 16040641 + 102011483 AGCD01037891;GBCE01068870;XM_005391590 XP_005391647 MODEL 9065969 protein-coding Brinp3 BMP/retinoic acid inducible neural specific 3 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); exploration behavior (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); cerebral infarction (ortholog); Chronic Periodontitis (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955406 27870115 28240328 - 102015074 AGCD01006290;AGCD01006291;AGCD01006292;AGCD01006293;AGCD01006294;AGCD01006295;GBDF01307752;XM_005375093;XM_005375094;XM_005375095 XP_005375150;XP_005375151;XP_005375152 MODEL 8928493 pseudo LOC102006560 histone-binding protein RBBP4 pseudogene NW_004955412 4399982 4403024 - 102006560 AGCD01012596 MODEL 39132012 rrna 5S_rRNA 5S ribosomal RNA 8743330 protein-coding Erbb3 erb-b2 receptor tyrosine kinase 3 ENCODES a protein that exhibits ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amblyopia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN apical part of cell; apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955458 3683126 3701752 + 102028937 AGCD01047336;AGCD01047337;GBBH01093140;GBDJ01015857;XM_005397284 XP_005397341 MODEL 9016674 protein-coding Celf2 CUGBP Elav-like family member 2 ENCODES a protein that exhibits lncRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN mRNA splice site recognition (ortholog); post-transcriptional gene silencing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 27064497 27374850 + 102014790 AGCD01022278;AGCD01022279;AGCD01022280;AGCD01022281;AGCD01022282;GBDJ01064049;XM_005383884;XM_005383886;XM_005383887;XM_013513693;XM_013513694;XM_013513696;XM_013513697;XM_013513698 XP_005383941;XP_005383943;XP_005383944;XP_013369147;XP_013369148;XP_013369150;XP_013369151;XP_013369152 MODEL 8871086 protein-coding Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); negative regulation of coagulation (ortholog); regulation of viral entry into host cell (ortholog); ASSOCIATED WITH melanoma (ortholog) NW_004955526 2418217 2652025 + 102003797 AGCD01069305;AGCD01069306;AGCD01069307;AGCD01069308;AGCD01069309;GBDF01075917;XM_005409760;XM_005409762;XM_005409763;XM_013507348;XM_013507349;XM_013507350 XP_005409817;XP_005409819;XP_005409820;XP_013362802;XP_013362803;XP_013362804 MODEL 39131297 protein-coding IL1RAPL1 interleukin 1 receptor accessory protein like 1 8980145 protein-coding Lhx3 LIM homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN cell differentiation (ortholog); dorsal/ventral pattern formation (ortholog); gene expression (ortholog); ASSOCIATED WITH amenorrhea (ortholog); atrial fibrillation (ortholog); combined or isolated pituitary hormone deficiency 1 (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955513 4464149 4470962 + 102016736 AGCD01066927;AGCD01066928;XM_005408529 XP_005408586 MODEL 8923969 protein-coding Atp2c2 ATPase secretory pathway Ca2+ transporting 2 ENCODES a protein that exhibits P-type calcium transporter activity (ortholog); P-type manganese transporter activity (ortholog); INVOLVED IN mammary gland epithelium development (ortholog); positive regulation of calcium ion import (ortholog); protein localization to plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955541 47803 95074 + 102013340 AGCD01071344;AGCD01071345;GBBH01000294;XM_005410958;XM_013507971 XP_005411015;XP_013363425 MODEL 8772561 pseudo LOC102008442 26S proteasome non-ATPase regulatory subunit 14 pseudogene NW_004955428 13615029 13616146 - 102008442 AGCD01027959 MODEL 8826518 protein-coding Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955409 37650220 37662950 - 102007865 AGCD01010533;GBDJ01073960;XM_005377129;XM_005377130 XP_005377186;XP_005377187 MODEL 9029927 protein-coding Actrt3 actin related protein T3 ASSOCIATED WITH acute myeloid leukemia (ortholog); urinary bladder cancer (ortholog); FOUND IN male germ cell nucleus (ortholog) NW_004955420 28183 30207 - 102012326 AGCD01020530;GBCQ01187131;XM_005382947 XP_005383004 MODEL 10285825 ncrna LOC106149917 uncharacterized LOC106149917 NW_004955457 780625 801104 - 106149917 AGCD01046714;AGCD01046715;GBDF01099763;XR_001236382 MODEL 39134020 misc_rna 7SK 7SK RNA 8906288 ncrna LOC102006934 uncharacterized LOC102006934 NW_004955425 7579288 7588814 + 102006934 AGCD01025389;GBDF01234416;XR_261134 MODEL 39133891 misc_rna 7SK 7SK RNA 8957090 ncrna LOC102005498 uncharacterized LOC102005498 NW_004955522 4121118 4127681 - 102005498 AGCD01068413;GBDF01226154;XR_001231895;XR_264630 MODEL 8937564 protein-coding Dynlt1 dynein light chain Tctex-type 1 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); GTP-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN axon development (ortholog); cardiac muscle cell apoptotic process (ortholog); dendrite development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN axonal growth cone (ortholog); cell body (ortholog); cytoplasmic dynein complex (ortholog) NW_004955439 3833525 3842393 + 102011912 AGCD01035690;GBDF01005833;XM_005390519 XP_005390576 MODEL 9025073 protein-coding Cab39 calcium binding protein 39 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase activator activity (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); response to activity (ortholog); response to thyroid hormone (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); hyperthyroidism (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog); serine/threonine protein kinase complex (ortholog) NW_004955453 4582530 4670978 - 102026711 AGCD01044692;AGCD01044693;AGCD01044694;AGCD01044695;GBDF01010077;XM_005395412;XM_005395413;XM_005395414 XP_005395469;XP_005395470;XP_005395471 MODEL 8991500 protein-coding LOC102009190 uncharacterized LOC102009190 NW_004955420 26585304 26590726 - 102009190 AGCD01021418;GBBH01189737;XM_013513347 XP_013368801 MODEL 8840265 protein-coding Emc7 ER membrane protein complex subunit 7 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955416 459668 482562 + 102022189 AGCD01016802;AGCD01016803;AGCD01016804;GBDF01007726;XM_005381163 XP_005381220 MODEL 8904836 protein-coding Trim33 tripartite motif containing 33 ENCODES a protein that exhibits co-SMAD binding (ortholog); promoter-specific chromatin binding (ortholog); R-SMAD binding (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of BMP signaling pathway (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955435 17631596 17750261 - 102029788 AGCD01033362;AGCD01033363;AGCD01033364;GBDK01141829;XM_013516407 XP_013371861 MODEL 8716984 protein-coding Dhcr24 24-dehydrocholesterol reductase ENCODES a protein that exhibits Delta24(24-1) sterol reductase activity (ortholog); Delta24-sterol reductase activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cholesterol biosynthetic process (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955464 4533928 4557893 + 102024198 AGCD01049992;GBCE01031278;XM_005398508 XP_005398565 MODEL 8757923 protein-coding Ccdc17 coiled-coil domain containing 17 ASSOCIATED WITH cervical cancer (ortholog); colorectal adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog) NW_004955464 12661440 12667388 + 102027389 AGCD01050214;GBDJ01002886;XM_013521581 XP_013377035 MODEL 8822595 protein-coding LOC102011088 olfactory receptor 1361-like NW_004955408 1647226 1658966 + 102011088 AGCD01007970;XM_005376563 XP_005376620 MODEL 8727298 protein-coding Cdc42 cell division cycle 42 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); GBD domain binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament branching (ortholog); actin filament organization (ortholog); PARTICIPATES IN adenosine signaling pathway; c-Jun N-terminal kinases MAPK signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH Adrenal Gland Neoplasms (ortholog); Alzheimer's disease (ortholog); anemia (ortholog); FOUND IN apical part of cell (ortholog); cell leading edge (ortholog); cell periphery (ortholog) NW_004955452 2255940 2299042 + 102005099 AGCD01043886;AGCD01043887;AGCD01043888;AGCD01043889;AGCD01043890;GBBH01031197;XM_005394731;XM_005394732;XM_005394733;XM_013519580 XP_005394788;XP_005394789;XP_005394790;XP_013375034 MODEL 39131817 rrna 5S_rRNA 5S ribosomal RNA 8867425 protein-coding Apbb1 amyloid beta precursor protein binding family B member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN axon guidance (ortholog); DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955414 22121867 22137849 - 102020000 AGCD01015443;GBCQ01066769;GBDJ01011806;XM_013511828 XP_013367282 MODEL 8758264 protein-coding Chtop chromatin target of PRMT1 ENCODES a protein that exhibits methyl-CpG binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); in utero embryonic development (ortholog); mRNA export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); transcription export complex (ortholog) NW_004955545 282342 292428 + 102014495 AGCD01071781;AGCD01071782;GBDJ01010515;XM_005411419;XM_005411421;XM_005411422;XM_005411423;XM_005411424;XM_005411425;XM_013508321;XM_013508322;XM_013508323 XP_005411476;XP_005411478;XP_005411479;XP_005411480;XP_005411481;XP_005411482;XP_013363775;XP_013363776;XP_013363777 MODEL 8832499 protein-coding Ier3 immediate early response 3 INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); COVID-19 (ortholog); hypertension (ortholog); FOUND IN nucleus (ortholog) NW_004955583 730353 731301 - 102019341 AGCD01075858;GBDF01049433;XM_005414319 XP_005414376 MODEL 9004164 protein-coding Ankef1 ankyrin repeat and EF-hand domain containing 1 ASSOCIATED WITH congenital myasthenic syndrome 18 (ortholog); developmental and epileptic encephalopathy 12 (ortholog) NW_004955415 19967234 19988725 + 102023585 AGCD01016482;GBDF01047742;XM_005380869;XM_013512109 XP_005380926;XP_013367563 MODEL 8800744 ncrna LOC102017608 uncharacterized LOC102017608 NW_004955442 14552373 14553007 + 102017608 AGCD01037826;XR_001235384 MODEL 39134293 misc_rna 7SK 7SK RNA 9032843 protein-coding LOC102004463 olfactory receptor 8G1-like NW_004955412 25028370 25030457 + 102004463 AGCD01013133;XM_005378412;XM_013510986 XP_005378469;XP_013366440 MODEL 8967587 protein-coding Clip2 CAP-Gly domain containing linker protein 2 ENCODES a protein that exhibits microtubule binding (ortholog); microtubule plus-end binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); dendritic microtubule (ortholog) NW_004955456 13593322 13631809 - 102018569 AGCD01046603;AGCD01046604;AGCD01046605;GBCE01098490;GBDK01021994;XM_005396751 XP_005396808 MODEL 8995292 protein-coding Adprs ADP-ribosylserine hydrolase ENCODES a protein that exhibits ADP-ribosylserine-[protein] hydrolase activity (ortholog); hydrolase activity, hydrolyzing O-glycosyl compounds (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular response to superoxide (ortholog); DNA repair (ortholog); negative regulation of necroptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) NW_004955452 14123590 14126522 + 102025866 AGCD01044452;GBCB01074091;XM_013519533 XP_013374987 MODEL 8740819 pseudo LOC102003734 RWD domain-containing protein 1 pseudogene NW_004955457 11994927 11995651 + 102003734 AGCD01046997 MODEL 8808046 protein-coding Akr7a2 aldo-keto reductase family 7 member A2 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); phenanthrene-9,10-epoxide hydrolase activity (ortholog); INVOLVED IN daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) NW_004955452 6844 13868 - 102009010 AGCD01043795;AGCD01043796;GBBH01000796;GBCE01006855;XM_013519552 XP_013375006 MODEL 8762922 protein-coding Ccnj cyclin J NW_004955507 2274695 2293637 + 102013739 AGCD01065584;AGCD01065585;GBDF01111077;XM_005407563;XM_005407565 XP_005407620;XP_005407622 MODEL 39133685 misc_rna 7SK 7SK RNA 8772275 ncrna LOC102012713 uncharacterized LOC102012713 NW_004955599 522218 526724 - 102012713 AGCD01076655;GBDI01339273;XR_001232551;XR_001232552;XR_265154 MODEL 8947773 pseudo LOC102021682 ATM interactor pseudogene NW_004955422 20655541 20656652 + 102021682 AGCD01023085 MODEL 9005065 protein-coding Kcng1 potassium voltage-gated channel modifier subfamily G member 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of potassium ion transmembrane transport (ortholog); regulation of potassium ion transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) NW_004955445 7411460 7427602 + 102021490 AGCD01039541;GBDJ01072856;GBDJ01072860;XM_005392303 XP_005392360 MODEL 8873605 protein-coding LOC102008080 cytochrome c-like NW_004955413 7665162 7665698 - 102008080 AGCD01013828;GBDF01269962;XM_005378936 XP_005378993 MODEL 8901444 ncrna LOC102010321 uncharacterized LOC102010321 NW_004955402 42833311 42840895 + 102010321 AGCD01001049;GBCB01051675;XR_259085 MODEL 8756733 protein-coding Il1rapl2 interleukin 1 receptor accessory protein like 2 INVOLVED IN regulation of presynapse assembly (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog) NW_004955548 1462746 2623622 + 102005640 AGCD01072376;AGCD01072377;AGCD01072378;AGCD01072379;AGCD01072380;AGCD01072381;AGCD01072382;AGCD01072383;AGCD01072384;AGCD01072385;AGCD01072386;AGCD01072387;AGCD01072388;AGCD01072389;AGCD01072390;AGCD01072391;AGCD01072392;AGCD01072393;AGCD01072394;AGCD01072395;AGCD01072396;AGCD01072397;AGCD01072398;AGCD01072399;AGCD01072400;AGCD01072401;AGCD01072402;AGCD01072403;AGCD01072404;AGCD01072405;AGCD01072406;AGCD01072407;XM_005412011 XP_005412068 MODEL 8772249 protein-coding Gpr89a G protein-coupled receptor 89A ENCODES a protein that exhibits voltage-gated monoatomic anion channel activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); intracellular pH reduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN Golgi cisterna membrane (ortholog); Golgi membrane (ortholog); Golgi-associated vesicle membrane (ortholog) NW_004955568 436817 493188 - 102009771 AGCD01074514;AGCD01074515;AGCD01074516;AGCD01074517;AGCD01074518;AGCD01074519;AGCD01074520;GBDF01126235;XM_005413448;XM_005413449;XM_005413450 XP_005413505;XP_005413506;XP_005413507 MODEL 9010605 protein-coding Atp4a ATPase H+/K+ transporting subunit alpha ENCODES a protein that exhibits magnesium ion binding (ortholog); P-type potassium:proton transporter activity (ortholog); potassium ion binding (ortholog); INVOLVED IN pH reduction (ortholog); potassium ion transmembrane transport (ortholog); regulation of proton transport (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; esomeprazole pharmacokinetics pathway; ASSOCIATED WITH stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); potassium:proton exchanging ATPase complex (ortholog) NW_004955468 4778327 4844498 - 102023458 AGCD01051922;GBDF01080855;XM_013522382;XM_013522383 XP_013377836;XP_013377837 MODEL 8812655 protein-coding LOC102009554 kallikrein-4-like NW_004955558 1976188 2013876 + 102009554 AGCD01073492;AGCD01073493;AGCD01073494;AGCD01073495;AGCD01073496;XM_013508850 XP_013364304 MODEL 8940040 protein-coding LOC102004083 BPI fold-containing family A member 2 NW_004955422 28150582 28155982 - 102004083 AGCD01023344;XM_013513841 XP_013369295 MODEL 8843090 pseudo LOC102011486 RNA-binding protein 4B pseudogene NW_004955446 4882192 4882609 - 102011486 AGCD01040049 MODEL 10345881 protein-coding Card6 caspase recruitment domain family member 6 INVOLVED IN cholesterol efflux (ortholog); cholesterol import (ortholog); foam cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955426 25123436 25132198 + 106148678 AGCD01026702;GBDJ01358613;XM_013514977 XP_013370431 MODEL 10135424 ncrna LOC106149918 uncharacterized LOC106149918 NW_004955457 611440 618723 - 106149918 AGCD01046712;XR_001236383 MODEL 8792700 protein-coding Cab39l calcium binding protein 39 like ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955431 2781714 2899857 - 102022840 AGCD01029939;AGCD01029940;AGCD01029941;AGCD01029942;GBDJ01131213;XM_005387582;XM_005387583;XM_005387584;XM_005387585;XM_005387588;XM_005387589 XP_005387639;XP_005387640;XP_005387641;XP_005387642;XP_005387645;XP_005387646 MODEL 8930882 protein-coding Erbb4 erb-b2 receptor tyrosine kinase 4 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac muscle tissue regeneration (ortholog); cell fate commitment (ortholog); cell migration (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); caveola (ortholog); dendrite (ortholog) NW_004955457 3177905 4236152 + 102026721 AGCD01046765;AGCD01046766;AGCD01046767;AGCD01046768;AGCD01046769;AGCD01046770;AGCD01046771;AGCD01046772;AGCD01046773;AGCD01046774;AGCD01046775;AGCD01046776;AGCD01046777;AGCD01046778;AGCD01046779;AGCD01046780;AGCD01046781;AGCD01046782;AGCD01046783;AGCD01046784;AGCD01046785;AGCD01046786;AGCD01046787;GBCQ01117703;GBCQ01117704;XM_005396937;XM_005396938;XM_005396939;XM_005396940;XM_013520736 XP_005396994;XP_005396995;XP_005396996;XP_005396997;XP_013376190 MODEL 8704012 protein-coding Celf3 CUGBP Elav-like family member 3 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); lncRNA transcription (ortholog); nuclear body organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955589 700965 715684 + 102016965 AGCD01076181;GBBH01095116;XM_005414558;XM_005414559;XM_005414561;XM_005414562;XM_005414563;XM_005414565 XP_005414615;XP_005414616;XP_005414618;XP_005414619;XP_005414620;XP_005414622 MODEL 10353052 protein-coding Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH epilepsy (ortholog); Hereditary Angioedema 8 (ortholog); pneumoconiosis (ortholog) NW_004955442 15337106 15344453 + 106146225 AGCD01037866;GBBH01165018;XM_005391503 XP_005391560 MODEL 39131818 rrna 5S_rRNA 5S ribosomal RNA 8926213 protein-coding Lhx4 LIM homeobox 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); medial motor column neuron differentiation (ortholog); motor neuron axon guidance (ortholog); ASSOCIATED WITH combined or isolated pituitary hormone deficiency 1 (ortholog); combined pituitary hormone deficiency 4 (ortholog); genetic disease (ortholog) NW_004955406 19457658 19470875 + 102010972 AGCD01006082;GBDF01262146;XM_013503151 XP_013358605 MODEL 8720989 pseudo LOC102008445 proteasome assembly chaperone 1-like NW_004955431 13381828 13382937 - 102008445 AGCD01030304 MODEL 8833858 protein-coding Acvr1 activin A receptor type 1 ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type I (ortholog); ATP binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); acute inflammatory response (ortholog); atrial septum primum morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); bicuspid aortic valve disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN activin receptor complex (ortholog); apical part of cell (ortholog); plasma membrane (ortholog) NW_004955449 15587958 15706432 + 102013986 AGCD01042198;AGCD01042199;GBCE01051925;XM_005393398;XM_005393399;XM_005393403;XM_005393405;XM_013518776;XM_013518777;XM_013518778;XM_013518779;XM_013518780 XP_005393455;XP_005393456;XP_005393460;XP_005393462;XP_013374230;XP_013374231;XP_013374232;XP_013374233;XP_013374234 MODEL 9046756 protein-coding Egfl8 EGF like domain multiple 8 INVOLVED IN in utero embryonic development (ortholog) NW_004955437 630099 633592 + 102013968 AGCD01034152;GBDI01325138;XM_005389429;XM_005389431;XM_005389432 XP_005389486;XP_005389488;XP_005389489 MODEL 8942923 protein-coding LOC102006562 olfactory receptor 10J1-like NW_004955468 11188817 11189746 + 102006562 AGCD01052120;XM_013522346 XP_013377800 MODEL 8843061 protein-coding Brip1 BRCA1 interacting DNA helicase 1 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); chromatin binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to hypoxia (ortholog); cellular response to vitamin (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN BRCA1-B complex (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) NW_004955451 2705834 2820610 - 102010854 AGCD01043022;AGCD01043023;GBDK01359826;XM_013519414 XP_013374868 MODEL 39134022 misc_rna 7SK 7SK RNA 8916131 pseudo LOC102012714 heterogeneous nuclear ribonucleoprotein A3-like NW_004955402 57336253 57364330 - 102012714 AGCD01001495 MODEL 8872076 protein-coding LOC102006937 olfactory receptor 5B3-like NW_004955511 3259255 3266476 - 102006937 AGCD01066452;XM_013506400 XP_013361854 MODEL 8792308 pseudo LOC102005500 sorting nexin-2 pseudogene NW_004955434 22965591 22967140 - 102005500 AGCD01032690 MODEL 39132013 rrna 5S_rRNA 5S ribosomal RNA 8789204 ncrna LOC102009200 uncharacterized LOC102009200 NW_004955505 3088445 3096275 + 102009200 AGCD01065015;GBDF01203512;XR_264305 MODEL 8965566 protein-coding Dynlt2 dynein light chain Tctex-type 2 INVOLVED IN microtubule-based movement (ortholog); FOUND IN cytoplasmic dynein complex (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955411 3866312 3903862 + 102020225 AGCD01011556;AGCD01011557;AGCD01011558;AGCD01011559;AGCD01011560;AGCD01011561;GBDF01080138;XM_005377635 XP_005377692 MODEL 8716381 protein-coding Emc8 ER membrane protein complex subunit 8 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog); endoplasmic reticulum (ortholog) NW_004955541 873354 884247 - 102020052 AGCD01071363;GBDI01066673;GBDJ01075485;XM_005410981;XM_013507992 XP_005411038;XP_013363446 MODEL 8752802 protein-coding Trim35 tripartite motif containing 35 INVOLVED IN antiviral innate immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955403 49821150 49841634 - 102003612 AGCD01002951;GBDK01146352;XM_005373737 XP_005373794 MODEL 8751547 protein-coding Ccdc170 coiled-coil domain containing 170 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Estrogen Resistance (ortholog); FOUND IN ciliary basal body (ortholog); Golgi apparatus (ortholog) NW_004955439 10010421 10114323 - 102029329 AGCD01035848;AGCD01035849;AGCD01035850;AGCD01035851;AGCD01035852;AGCD01035853;AGCD01035854;AGCD01035855;AGCD01035856;GBDI01169107;XM_005390576;XM_005390577;XM_013517399;XM_013517400 XP_005390633;XP_005390634;XP_013372853;XP_013372854 MODEL 9031206 ncrna LOC102011091 uncharacterized LOC102011091 NW_004955409 10810505 10829604 + 102011091 AGCD01009485;GBDI01024783;XR_259768 MODEL 8938904 protein-coding Dhcr7 7-dehydrocholesterol reductase ENCODES a protein that exhibits 7-dehydrocholesterol reductase activity (ortholog); cholesterol-5,6-oxide hydrolase activity (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); INVOLVED IN blood vessel development (ortholog); cell differentiation (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN cholesterol biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Animal Disease Models (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear outer membrane (ortholog) NW_004955422 15119155 15136771 + 102016485 AGCD01022876;GBCE01123738;XM_005384227;XM_005384228;XM_005384229;XM_013514319 XP_005384284;XP_005384285;XP_005384286;XP_013369773 MODEL 8852754 protein-coding Cdc42bpa CDC42 binding protein kinase alpha ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN actomyosin (ortholog); cell leading edge (ortholog); cell-cell junction (ortholog) NW_004955406 9906195 10178281 + 102013378 AGCD01005840;AGCD01005841;AGCD01005842;AGCD01005843;AGCD01005844;AGCD01005845;AGCD01005846;AGCD01005847;AGCD01005848;AGCD01005849;GBCQ01099552;GBDK01017928;XM_005374798 XP_005374855 MODEL 8881211 protein-coding Apbb1ip amyloid beta precursor protein binding family B member 1 interacting protein INVOLVED IN positive regulation of cell adhesion (ortholog); T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) NW_004955429 2874783 2973321 - 102009407 AGCD01028444;AGCD01028445;AGCD01028446;GBCE01163226;GBDI01006228;XM_013515446 XP_013370900 MODEL 8920577 protein-coding Il1rl1 interleukin 1 receptor like 1 ENCODES a protein that exhibits interleukin-33 binding (ortholog); interleukin-33 receptor activity (ortholog); INVOLVED IN cellular response to endothelin (ortholog); cellular response to mechanical stimulus (ortholog); inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular matrix (ortholog) NW_004955470 7779828 7849157 + 102020238 AGCD01052809;AGCD01052810;AGCD01052811;AGCD01052812;GBCE01046532;XM_005400767;XM_005400768;XM_013522847;XM_013522848;XM_013522849;XM_013522850;XM_013522851;XM_013522852;XM_013522853;XM_013522854 XP_005400824;XP_005400825;XP_013378301;XP_013378302;XP_013378303;XP_013378304;XP_013378305;XP_013378306;XP_013378307;XP_013378308 MODEL 9015155 ncrna LOC102009555 uncharacterized LOC102009555 NW_004955443 5716273 5723524 + 102009555 AGCD01038243;GBDF01305708;XR_001235476;XR_262177 MODEL 39134295 misc_rna 7SK 7SK RNA 9014314 protein-coding Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 INVOLVED IN behavioral fear response (ortholog); equilibrioception (ortholog); locomotor rhythm (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); lung cancer (ortholog) NW_004955451 6269168 6656763 - 102014966 AGCD01043201;AGCD01043202;AGCD01043203;AGCD01043204;AGCD01043205;AGCD01043206;AGCD01043207;AGCD01043208;GBDJ01075914;XM_005394074;XM_005394075;XM_013519405;XM_013519406;XM_013519407;XM_013519408 XP_005394131;XP_005394132;XP_013374859;XP_013374860;XP_013374861;XP_013374862 MODEL 8792305 pseudo LOC102004464 ubiquitin-like-conjugating enzyme ATG3 pseudogene NW_004955466 12161005 12161997 - 102004464 AGCD01051113;XR_263318 MODEL 9014257 ncrna LOC102003737 uncharacterized LOC102003737 NW_004955459 3075325 3077325 - 102003737 AGCD01048007;GBCQ01075158;XR_263012 MODEL 8990541 protein-coding Akt1 AKT serine/threonine kinase 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic mitochondrial changes (ortholog); behavioral response to pain (ortholog); PARTICIPATES IN adenosine signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; ceramide signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute promyelocytic leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955538 3208711 3224386 - 102027569 AGCD01071153;GBBH01032910;GBDJ01137252;XM_005410844 XP_005410901 MODEL 8757079 protein-coding Ccnjl cyclin J like ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955408 14119901 14165545 - 102024649 AGCD01008384;GBBH01009087;GBDF01224331;XM_005376258 XP_005376315 MODEL 39133686 misc_rna 7SK 7SK RNA 39133892 misc_rna 7SK 7SK RNA 8909923 ncrna LOC102021687 uncharacterized LOC102021687 NW_004955500 6724671 6728915 + 102021687 AGCD01063892;GBDJ01218162;XR_001231489 MODEL 8705126 protein-coding Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lipase activator activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); phosphatidic acid biosynthetic process (ortholog); positive regulation of lipid catabolic process (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 1 (ortholog); cervical cancer (ortholog); Chanarin-Dorfman syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955420 27484500 27508360 - 102013938 AGCD01021454;GBDF01266672;XM_005383485 XP_005383542 MODEL 8997375 protein-coding Kcng2 potassium voltage-gated channel modifier subfamily G member 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN regulation of potassium ion transport (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955402 62997807 63033813 + 102015264 AGCD01001651;AGCD01001652;AGCD01001653;GBCB01086119;XM_013512105 XP_013367559 MODEL 8730291 protein-coding LOC102017609 RIMS-binding protein 3A-like NW_004955442 17581675 17586967 + 102017609 AGCD01037968;GBDF01001981;XM_005391709 XP_005391766 MODEL 9007008 pseudo LOC102008087 Y+L amino acid transporter 2 pseudogene NW_004955472 118385 120399 + 102008087 AGCD01053315 MODEL 9059825 protein-coding Adra1a adrenoceptor alpha 1A ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN response to cocaine; adrenergic receptor signaling pathway (ortholog); adult heart development (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); bladder neck obstruction (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dopaminergic synapse (ortholog) NW_004955403 49394173 49485881 - 102029468 AGCD01002943;AGCD01002944;AGCD01002945;AGCD01002946;GBDF01041155;XM_013514140;XM_013514141;XM_013514144 XP_013369594;XP_013369595;XP_013369598 MODEL 8765697 protein-coding LOC102010322 cytochrome P450 1A2 ENCODES a protein that exhibits caffeine oxidase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN alkaloid metabolic process (ortholog); cellular respiration (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; caffeine pharmacokinetics pathway; clomipramine pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); Atrophy (ortholog) NW_004955450 3165107 3171894 - 102010322 AGCD01042426;GBBH01140851;XM_005393544;XM_005393545 XP_005393601;XP_005393602 MODEL 8851512 protein-coding Ier3ip1 immediate early response 3 interacting protein 1 INVOLVED IN brain development (ortholog); cell maturation (ortholog); chromatin organization (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); Microcephaly, Epilepsy, and Diabetes Syndrome (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 32532692 32550638 - 102007070 AGCD01000824;AGCD01000825;GBDK01229939;XM_005372888 XP_005372945 MODEL 8703255 protein-coding Gprasp1 G protein-coupled receptor associated sorting protein 1 INVOLVED IN endosome to lysosome transport (ortholog); G protein-coupled receptor catabolic process (ortholog); FOUND IN cytosol (ortholog) NW_004955548 132373 137817 + 102020290 AGCD01072319;GBDI01177597;XM_005411968 XP_005412025 MODEL 8938013 protein-coding Atp4b ATPase H+/K+ transporting subunit beta ENCODES a protein that exhibits heterocyclic compound binding (ortholog); INVOLVED IN pH reduction (ortholog); potassium ion transmembrane transport (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; esomeprazole pharmacokinetics pathway; ASSOCIATED WITH atrophic gastritis (ortholog); autoimmune gastritis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN plasma membrane (ortholog); potassium:proton exchanging ATPase complex (ortholog) NW_004955404 362410 372077 + 102030030 AGCD01003199;GBDK01001430;XM_005373937 XP_005373994 MODEL 8738962 protein-coding Clip3 CAP-Gly domain containing linker protein 3 ENCODES a protein that exhibits ganglioside binding (ortholog); microtubule binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); membrane biogenesis (ortholog); negative regulation of microtubule polymerization (ortholog); FOUND IN early endosome membrane (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955468 2560953 2575073 + 102011753 AGCD01051827;GBDI01208264;XM_005399927;XM_005399928 XP_005399984;XP_005399985 MODEL 9010383 protein-coding LOC102011487 olfactory receptor 2B6-like NW_004955576 1333991 1334947 + 102011487 AGCD01075372;XM_005413953 XP_005414010 MODEL 8716606 protein-coding Card9 caspase recruitment domain family member 9 ENCODES a protein that exhibits CARD domain binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antifungal innate immune response (ortholog); apoptotic signaling pathway (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955513 4350873 4359345 + 102010082 AGCD01066927;GBBH01090040;XM_005408509;XM_013506614;XM_013506615;XM_013506616 XP_005408566;XP_013362068;XP_013362069;XP_013362070 MODEL 10294489 ncrna LOC106149919 uncharacterized LOC106149919 NW_004955457 8893976 8911353 - 106149919 AGCD01046920;AGCD01046921;GBDJ01352635;XR_001236394;XR_001236395;XR_001236396;XR_001236397 MODEL 39134024 misc_rna 7SK 7SK RNA 9045232 protein-coding LOC102012716 PRAME family member 23-like NW_004955618 152655 161495 - 102012716 AGCD01077302;AGCD01077303;AGCD01077304;XM_013510148 XP_013365602 MODEL 8738170 protein-coding Cabcoco1 ciliary associated calcium binding coiled-coil 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN sperm flagellum assembly (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) NW_004955425 15007833 15115084 + 102018510 AGCD01025574;GBDF01089420;XM_005385945 XP_005386002 MODEL 9049882 protein-coding Erbin erbb2 interacting protein ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); negative regulation of monocyte chemotactic protein-1 production (ortholog); negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955446 3046268 3151796 - 102017075 AGCD01039998;AGCD01039999;AGCD01040000;AGCD01040001;AGCD01040002;GBBH01209360;GBDJ01086651;XM_013518424;XM_013518425;XM_013518427;XM_013518428;XM_013518429;XM_013518430;XM_013518431;XM_013518432 XP_013373878;XP_013373879;XP_013373881;XP_013373882;XP_013373883;XP_013373884;XP_013373885;XP_013373886 MODEL 8968791 protein-coding Emc9 ER membrane protein complex subunit 9 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); Mesothelioma (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog) NW_004955409 36257904 36262120 + 102009357 AGCD01010454;GBDK01277777;XM_005377037 XP_005377094 MODEL 8758405 protein-coding Hs6st1 heparan sulfate 6-O-sulfotransferase 1 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); labyrinthine layer blood vessel development (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism (ortholog); hypogonadotropic hypogonadism 15 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955459 2273100 2310993 + 102017850 AGCD01047988;GBCB01024627;GBDI01125322;XM_005397559 XP_005397616 MODEL 8967634 protein-coding Ccdc171 coiled-coil domain containing 171 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955434 18401276 18760776 + 102020834 AGCD01032565;AGCD01032566;AGCD01032567;AGCD01032568;AGCD01032569;AGCD01032570;AGCD01032571;AGCD01032572;AGCD01032573;AGCD01032574;AGCD01032575;AGCD01032576;AGCD01032577;AGCD01032578;AGCD01032579;GBDF01127705;GBDF01127709;XM_013516391 XP_013371845 MODEL 39131819 rrna 5S_rRNA 5S ribosomal RNA 8820351 ncrna LOC102008451 uncharacterized LOC102008451 NW_004955435 5691131 5736182 + 102008451 AGCD01032894;GBCQ01091899;XR_001234882 MODEL 8815559 pseudo LOC102004085 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like NW_004955495 2998284 2999787 + 102004085 AGCD01061814 MODEL 9003015 protein-coding Apbb2 amyloid beta precursor protein binding family B member 2 INVOLVED IN axon guidance (ortholog); extracellular matrix organization (ortholog); maintenance of lens transparency (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955443 6513762 6786247 + 102013223 AGCD01038261;AGCD01038262;AGCD01038263;GBCQ01034557;XM_005391938;XM_005391948;XM_013518039;XM_013518040;XM_013518041;XM_013518042;XM_013518043;XM_013518044;XM_013518045;XM_013518046;XM_013518047;XM_013518048;XM_013518049;XM_013518050 XP_005391995;XP_005392005;XP_013373493;XP_013373494;XP_013373495;XP_013373496;XP_013373497;XP_013373498;XP_013373499;XP_013373500;XP_013373501;XP_013373502;XP_013373503;XP_013373504 MODEL 9060024 ncrna LOC102009556 uncharacterized LOC102009556 NW_004955444 690141 694617 - 102009556 AGCD01038682;GBCE01026109;XR_262224;XR_262225 MODEL 9058412 protein-coding Chuk component of inhibitor of nuclear factor kappa B kinase complex ENCODES a protein that exhibits IkappaB kinase activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); cellular response to virus (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; interleukin-1 signaling pathway; ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); bacterial pneumonia (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955507 6066026 6102066 - 102005401 AGCD01065695;AGCD01065696;GBBH01131798;GBCC01033483;XM_005407721 XP_005407778 MODEL 8920778 protein-coding Acvr1b activin A receptor type 1B ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); cardiac fibroblast cell development (ortholog); development of primary female sexual characteristics (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); dextro-looped transposition of the great arteries (ortholog); FOUND IN activin receptor complex (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955547 2311573 2366106 + 102029799 AGCD01072268;AGCD01072269;AGCD01072270;AGCD01072271;AGCD01072272;AGCD01072273;AGCD01072274;GBDI01218066;XM_005411922;XM_005411923 XP_005411979;XP_005411980 MODEL 8994315 protein-coding Egflam EGF like, fibronectin type III and laminin G domains ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); synapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); extracellular matrix (ortholog) NW_004955426 22856515 23030517 + 102018622 AGCD01026627;AGCD01026628;AGCD01026629;AGCD01026630;AGCD01026631;AGCD01026632;GBDF01182451;XM_005386224 XP_005386281 MODEL 8773900 pseudo LOC102006568 prefoldin subunit 1 pseudogene NW_004955472 1989943 1990819 - 102006568 AGCD01053427 MODEL 39133688 misc_rna 7SK 7SK RNA 8765764 protein-coding Cdc42bpb CDC42 binding protein kinase beta ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN actomyosin (ortholog); anchoring junction (ortholog); plasma membrane (ortholog) NW_004955538 2023681 2113213 - 102015447 AGCD01071095;AGCD01071096;AGCD01071097;GBCQ01038720;GBDF01126689;XM_013507874 XP_013363328 MODEL 8811038 protein-coding LOC102005501 chloride channel protein ClC-Ka NW_004955527 2203583 2213969 - 102005501 AGCD01069424;GBCQ01008207;XM_005409849;XM_005409850;XM_013507416 XP_005409906;XP_005409907;XP_013362870 MODEL 8892998 ncrna LOC102009202 uncharacterized LOC102009202 NW_004955508 2070981 2129438 - 102009202 AGCD01065779;AGCD01065780;AGCD01065781;AGCD01065782;GBDF01234233;XR_001231648;XR_001231649;XR_001231650;XR_001231651;XR_001231652;XR_264387 MODEL 8733717 protein-coding Dynlt2b dynein light chain Tctex-type 2B ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary base (ortholog) NW_004955420 12515195 12528863 - 102011449 AGCD01020868;AGCD01020869;AGCD01020870;GBDF01081244;XM_005383130;XM_013513399 XP_005383187;XP_013368853 MODEL 8953675 pseudo LOC102011094 ubiquitin-conjugating enzyme E2 D3-like NW_004955409 26283548 26284242 - 102011094 AGCD01010170 MODEL 9006438 protein-coding Celf4 CUGBP Elav-like family member 4 ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); in utero embryonic development (ortholog); mRNA splice site recognition (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955402 23607160 23898495 - 102017078 AGCD01000629;AGCD01000630;AGCD01000631;AGCD01000632;AGCD01000633;GBDJ01265678;XM_005372840;XM_005372842;XM_013510322;XM_013510323 XP_005372897;XP_005372899;XP_013365776;XP_013365777 MODEL 8741147 protein-coding Trim36 tripartite motif containing 36 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN acrosome reaction (ortholog); mitotic cytokinesis (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anencephaly (ortholog); Anencephaly 1 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 34909194 34939635 - 102021524 AGCD01008924;GBDF01006446;GBDK01026073;XM_013506978 XP_013362432 MODEL 8954667 protein-coding Dhdds dehydrodolichyl diphosphate synthase subunit ENCODES a protein that exhibits ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN dolichyl diphosphate biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN dehydrodolichyl diphosphate synthase complex (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955452 5811053 5844992 + 102017944 AGCD01044055;AGCD01044056;AGCD01044057;AGCD01044058;GBDK01196360;XM_005394858;XM_013519674 XP_005394915;XP_013375128 MODEL 8916529 protein-coding Il1rl2 interleukin 1 receptor like 2 INVOLVED IN cytokine-mediated signaling pathway (ortholog); inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); ASSOCIATED WITH aortic dissection (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955470 7703369 7742058 + 102030184 AGCD01052803;AGCD01052804;GBDI01346727;XM_013522820;XM_013522821;XM_013522822 XP_013378274;XP_013378275;XP_013378276 MODEL 39134297 misc_rna 7SK 7SK RNA 8972932 protein-coding Brix1 biogenesis of ribosomes BRX1 FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955426 20042274 20051606 + 102005397 AGCD01026560;GBDF01054030;XM_005386187 XP_005386244 MODEL 8779289 protein-coding Ankfy1 ankyrin repeat and FYVE domain containing 1 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); endosomal vesicle fusion (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Charlevoix-Saguenay spastic ataxia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955467 12644070 12734546 + 102014762 AGCD01051655;AGCD01051656;AGCD01051657;AGCD01051658;GBBH01166066;GBDI01129342;XM_013522066 XP_013377520 MODEL 8729357 ncrna LOC102004468 uncharacterized LOC102004468 NW_004955413 29719091 29721582 + 102004468 AGCD01014592;GBDF01189455;XR_001233035;XR_001233036 MODEL 8840529 pseudo LOC102003747 aldo-keto reductase family 1 member B10-like NW_004955467 4392827 4400286 + 102003747 AGCD01051366 MODEL 8756670 protein-coding Ccnk cyclin K ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activity (ortholog); protein kinase binding (ortholog); RNA polymerase II CTD heptapeptide repeat kinase activity (ortholog); INVOLVED IN DNA damage response (ortholog); host-mediated suppression of viral genome replication (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH HYPERTELORISM AND DISTINCTIVE FACIES (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cyclin K-CDK12 complex (ortholog); cyclin K-CDK13 complex (ortholog); nucleoplasm (ortholog) NW_004955438 20826818 20850496 + 102028340 AGCD01035523;AGCD01035524;GBDF01008465;XM_013517170 XP_013372624 MODEL 9061175 protein-coding Akt1s1 AKT1 substrate 1 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell size (ortholog); negative regulation of protein kinase activity (ortholog); negative regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); TORC1 complex (ortholog) NW_004955559 1055998 1063192 + 102028475 AGCD01073627;GBDF01308323;XM_005412818;XM_005412820;XM_005412821;XM_013508970;XM_013508971 XP_005412875;XP_005412877;XP_005412878;XP_013364424;XP_013364425 MODEL 39132014 rrna 5S_rRNA 5S ribosomal RNA 9015115 pseudo LOC102006938 protein kinase C iota type pseudogene NW_004955430 13260783 13262484 + 102006938 AGCD01029529 MODEL 8937159 ncrna LOC102021688 uncharacterized LOC102021688 NW_004955425 15981368 16020243 - 102021688 AGCD01025594;GBDF01249930;XR_001234295;XR_261147;XR_261148;XR_261149;XR_261150 MODEL 39134025 misc_rna 7SK 7SK RNA 39131408 protein-coding KCNG2 potassium voltage-gated channel modifier subfamily G member 2 8848377 protein-coding LOC102017611 natural cytotoxicity triggering receptor 1-like NW_004955567 1860919 1864038 - 102017611 AGCD01074494;AGCD01074495;GBDI01309508;GBDK01092488;XM_005413395 XP_005413452 MODEL 8836104 ncrna LOC102008088 uncharacterized LOC102008088 NW_004955415 25886988 25916316 - 102008088 AGCD01016587;GBBH01171947;XR_260315 MODEL 39131528 protein-coding LHX4 LIM homeobox 4 8729195 protein-coding Adra1b adrenoceptor alpha 1B ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adult heart development (ortholog); behavioral response to cocaine (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH asthma (ortholog); Cardiomegaly (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); intercalated disc (ortholog); membrane (ortholog) NW_004955408 13883574 13937798 + 102020769 AGCD01008376;AGCD01008377;AGCD01008378;GBDK01070153;GBDK01070156;XM_013506606 XP_013362060 MODEL 8771779 pseudo LOC102010323 40S ribosomal protein S20 pseudogene NW_004955596 302819 303144 - 102010323 AGCD01076514 MODEL 8841146 protein-coding Ier5 immediate early response 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); positive regulation of cellular response to heat (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955406 20140510 20143147 + 102023432 AGCD01006098;AGCD01006099;GBBH01117662;GBDF01075618;XM_013521367 XP_013376821 MODEL 9061830 protein-coding Gprasp2 G protein-coupled receptor associated sorting protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); intellectual disability (ortholog); X-linked deafness 7 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955548 172442 202686 + 102020613 AGCD01072322;AGCD01072323;GBDF01252846;XM_013508532;XM_013508533;XM_013508534;XM_013508535;XM_013508536;XR_001232250 XP_013363986;XP_013363987;XP_013363988;XP_013363989;XP_013363990 MODEL 9058261 protein-coding Atp5f1a ATP synthase F1 subunit alpha ENCODES a protein that exhibits ADP binding (ortholog); angiostatin binding (ortholog); ATP binding (ortholog); INVOLVED IN ATP biosynthetic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to nitric oxide (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) NW_004955402 31652226 31662114 - 102027364 AGCD01000801;GBDK01016982;XM_005372864 XP_005372921 MODEL 8886137 protein-coding Apbb3 amyloid beta precursor protein binding family B member 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN negative regulation of cell cycle phase transition (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of protein secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nuclear body (ortholog) NW_004955418 118577 126021 + 102030632 AGCD01018668;GBDJ01340796;XM_005382021;XM_005382024;XM_013512904;XM_013512905 XP_005382078;XP_005382081;XP_013368358;XP_013368359 MODEL 8853750 protein-coding Clip4 CAP-Gly domain containing linker protein family member 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955469 10966830 11042494 + 102017761 AGCD01052553;AGCD01052554;GBDF01153727;GBDF01153747;XM_005400544 XP_005400601 MODEL 8841218 protein-coding Carf calcium responsive transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN granular component (ortholog); nucleus (ortholog) NW_004955457 11853256 11947909 - 102003414 AGCD01046988;AGCD01046989;AGCD01046990;AGCD01046991;AGCD01046992;AGCD01046993;AGCD01046994;AGCD01046995;AGCD01046996;GBDF01253627;XM_013520701;XM_013520702;XM_013520703;XM_013520704;XM_013520705;XM_013520706;XM_013520707;XM_013520708;XM_013520709;XM_013520710;XM_013520711;XM_013520712;XM_013520713;XM_013520714 XP_013376155;XP_013376156;XP_013376157;XP_013376158;XP_013376159;XP_013376160;XP_013376161;XP_013376162;XP_013376163;XP_013376164;XP_013376165;XP_013376166;XP_013376167;XP_013376168 MODEL 39133893 misc_rna 7SK 7SK RNA 10353116 ncrna LOC106149920 uncharacterized LOC106149920 NW_004955457 8966562 9000955 - 106149920 AGCD01046924;AGCD01046925;GBDF01305887;XR_001236398 MODEL 8751760 ncrna LOC102012718 uncharacterized LOC102012718 NW_004955403 26534439 26537509 + 102012718 AGCD01002308;GBCB01077504;XR_001233580;XR_259205 MODEL 8832907 ncrna LOC102009203 uncharacterized LOC102009203 NW_004955429 19713878 19748003 - 102009203 AGCD01028967;AGCD01028968;GBDK01115535;XR_001234525;XR_261366;XR_261367 MODEL 8938401 protein-coding Emcn endomucin ENCODES a protein that exhibits carbohydrate binding (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955496 7413228 7498983 + 102020583 AGCD01062379;GBCQ01007628;XM_005406259;XM_005406260 XP_005406316;XP_005406317 MODEL 8907916 protein-coding Erc1 ELKS/RAB6-interacting/CAST family member 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); small GTPase binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955454 3584910 4036276 + 102023327 AGCD01045094;AGCD01045095;AGCD01045096;AGCD01045097;AGCD01045098;AGCD01045099;AGCD01045100;AGCD01045101;AGCD01045102;AGCD01045103;AGCD01045104;AGCD01045105;AGCD01045106;AGCD01045107;AGCD01045108;GBBH01147455;XM_005395944;XM_005395945;XM_005395946;XM_005395947;XM_005395948;XM_005395949;XM_013520185;XM_013520186;XM_013520187;XM_013520189;XM_013520190;XM_013520191;XM_013520192 XP_005396001;XP_005396002;XP_005396003;XP_005396004;XP_005396005;XP_005396006;XP_013375639;XP_013375640;XP_013375641;XP_013375643;XP_013375644;XP_013375645;XP_013375646 MODEL 9047097 protein-coding Hs6st2 heparan sulfate 6-O-sulfotransferase 2 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955473 2002475 2291868 + 102025998 AGCD01053898;AGCD01053899;GBCB01055654;XM_005401205;XM_005401206;XM_005401207;XM_005401208;XM_005401209;XM_013523047 XP_005401262;XP_005401263;XP_005401264;XP_005401265;XP_005401266;XP_013378501 MODEL 39131820 rrna 5S_rRNA 5S ribosomal RNA 8797907 protein-coding Ccdc172 coiled-coil domain containing 172 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); sperm midpiece (ortholog) NW_004955431 21099475 21193932 + 102022004 AGCD01030491;AGCD01030492;AGCD01030493;AGCD01030494;GBDF01159648;XM_013515752;XM_013515753;XM_013515754;XM_013515755;XR_001234579;XR_001234580 XP_013371206;XP_013371207;XP_013371208;XP_013371209 MODEL 8843012 ncrna LOC102008453 uncharacterized LOC102008453 NW_004955436 8430136 8452234 + 102008453 AGCD01033741;AGCD01033742;GBDJ01154251;XR_261770 MODEL 8972169 protein-coding LOC102004087 zinc finger protein 709-like NW_004955497 2376 35406 + 102004087 AGCD01062397;AGCD01062398;GBDF01011194;XM_013505442;XM_013505444 XP_013360896;XP_013360898 MODEL 8705104 ncrna LOC102011493 uncharacterized LOC102011493 NW_004955403 2475409 2479214 + 102011493 AGCD01001736;GBDF01280925;XR_001234362 MODEL 8819520 pseudo LOC102009561 transcription elongation regulator 1 pseudogene NW_004955402 134030 135953 + 102009561 AGCD01000008 MODEL 8929831 ncrna LOC102004472 uncharacterized LOC102004472 NW_004955475 4433519 4450120 - 102004472 AGCD01054880;GBCE01047752;XR_263611 MODEL 8779337 protein-coding Acvr1c activin A receptor type 1C ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); apoptotic nuclear changes (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); retinal degeneration (ortholog); FOUND IN activin receptor complex (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955449 15814230 15864747 + 102016002 AGCD01042203;GBDI01023047;XM_005393407 XP_005393464 MODEL 8795990 protein-coding Egfr epidermal growth factor receptor ENCODES a protein that exhibits actin filament binding (ortholog); calmodulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cell morphogenesis (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; cetuximab pharmacodynamics pathway; E-cadherin signaling pathway; ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) NW_004955456 321222 456431 - 102003837 AGCD01046203;AGCD01046204;GBDJ01088996;XM_005396877 XP_005396934 MODEL 39133706 misc_rna 7SK 7SK RNA 8853723 protein-coding Akt2 AKT serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); molecular function activator activity (ortholog); protein kinase activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cellular response to high light intensity (ortholog); cellular response to hormone stimulus (ortholog); PARTICIPATES IN altered insulin responsive facilitative sugar transporter mediated glucose transport pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955578 950258 1004438 + 102017721 AGCD01075504;GBCB01001517;XM_005414067;XM_005414068;XM_005414069 XP_005414124;XP_005414125;XP_005414126 MODEL 8927000 pseudo LOC102021690 zinc finger protein 250-like NW_004955427 17506682 17508299 + 102021690 AGCD01027331 MODEL 8779708 protein-coding Cdc42bpg CDC42 binding protein kinase gamma ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 20331612 20350404 + 102026016 AGCD01023074;GBCQ01069831;XM_005384549;XM_013513970;XM_013513972;XM_013513973;XM_013513974;XM_013513975 XP_005384606;XP_013369424;XP_013369426;XP_013369427;XP_013369428;XP_013369429 MODEL 8866276 protein-coding Cabin1 calcineurin binding protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein phosphatase 2B binding (ortholog); INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); negative regulation of apoptotic process (ortholog); response to activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN HIR complex (ortholog); nucleoplasm (ortholog) NW_004955455 8162365 8312932 - 102007854 AGCD01045881;AGCD01045882;AGCD01045883;AGCD01045884;AGCD01045885;AGCD01045886;GBBH01092386;XM_013520395;XM_013520396;XM_013520398;XM_013520399;XM_013520400;XM_013520401 XP_013375849;XP_013375850;XP_013375852;XP_013375853;XP_013375854;XP_013375855 MODEL 9059924 protein-coding LOC102005505 homeobox protein ESX1-like NW_004955534 3330 9799 + 102005505 AGCD01070431;GBDF01222868;XM_005410423 XP_005410480 MODEL 8907648 protein-coding Dynlt3 dynein light chain Tctex-type 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of mitotic cell cycle (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic dynein complex (ortholog); kinetochore (ortholog); mitotic spindle astral microtubule (ortholog) NW_004955587 828730 838614 - 102012384 AGCD01076070;GBBH01004194;XM_005414452 XP_005414509 MODEL 9010377 ncrna LOC102011095 uncharacterized LOC102011095 NW_004955463 784664 786273 + 102011095 AGCD01049497;GBDF01014364;XR_263139 MODEL 8847509 protein-coding Trim37 tripartite motif containing 37 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AK119 ubiquitin ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aggresome assembly (ortholog); negative regulation of centriole replication (ortholog); negative regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN aggresome (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955451 3839757 4014178 + 102019228 AGCD01043075;AGCD01043076;AGCD01043077;AGCD01043078;AGCD01043079;AGCD01043080;AGCD01043081;AGCD01043082;AGCD01043083;AGCD01043084;AGCD01043085;AGCD01043086;AGCD01043087;XM_005393999;XM_013519212;XM_013519214;XM_013519215;XM_013519216;XM_013519217;XM_013519218;XM_013519219;XM_013519220;XM_013519221 XP_005394056;XP_013374666;XP_013374668;XP_013374669;XP_013374670;XP_013374671;XP_013374672;XP_013374673;XP_013374674;XP_013374675 MODEL 8923188 protein-coding Dhdh dihydrodiol dehydrogenase ENCODES a protein that exhibits D-xylose 1-dehydrogenase (NADP+) activity (ortholog); galactose 1-dehydrogenase (NADP+) activity (ortholog); glucose 1-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN D-xylose catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955559 1706950 1719220 - 102028476 AGCD01073662;AGCD01073663;AGCD01073664;GBCQ01129279;XM_005412923 XP_005412980 MODEL 39134301 misc_rna 7SK 7SK RNA 8763134 protein-coding Il1rn interleukin 1 receptor antagonist ENCODES a protein that exhibits interleukin-1 receptor antagonist activity (ortholog); interleukin-1 receptor binding (ortholog); interleukin-1 type I receptor antagonist activity (ortholog); INVOLVED IN acute-phase response (ortholog); carboxylic acid metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Abscess (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); vesicle (ortholog) NW_004955470 1145022 1159413 - 102020903 AGCD01052627;GBDJ01263056;XM_005400584;XM_005400585;XM_005400586;XM_013522846 XP_005400641;XP_005400642;XP_005400643;XP_013378300 MODEL 8973961 protein-coding Abhd6 abhydrolase domain containing 6, acylglycerol lipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); long-term synaptic depression (ortholog); lysobisphosphatidic acid metabolic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955430 1809969 1861441 - 102010506 AGCD01029135;AGCD01029136;AGCD01029137;AGCD01029138;GBDF01013377;XM_005387302 XP_005387359 MODEL 9023900 protein-coding Atp5f1b ATP synthase F1 subunit beta ENCODES a protein that exhibits ADP binding (ortholog); angiostatin binding (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); ATP biosynthetic process (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH acute kidney failure (ortholog); Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) NW_004955458 4188167 4195575 - 102028384 AGCD01047381;AGCD01047382;AGCD01047383;GBCQ01010805;XM_013520804 XP_013376258 MODEL 8791076 protein-coding Ankh ANKH inorganic pyrophosphate transport regulator ENCODES a protein that exhibits ATP transmembrane transporter activity (ortholog); phosphate transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN ATP export (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosis (ortholog); arthritis (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955426 3992671 4130754 - 102009521 AGCD01026087;AGCD01026088;GBCE01004397;GBCE01004398;XM_005386126 XP_005386183 MODEL 9010710 protein-coding Churc1 churchill domain containing 1 NW_004955466 4991571 5013568 - 102026091 AGCD01050864;AGCD01050865;GBCQ01011763;XM_005399116 XP_005399173 MODEL 8720378 protein-coding LOC102006569 olfactory receptor 51L1-like NW_004955414 21331309 21332259 - 102006569 AGCD01015415;XM_005380496 XP_005380553 MODEL 8881083 pseudo LOC102003752 26S protease regulatory subunit 4 pseudogene NW_004955469 9387077 9396448 - 102003752 AGCD01052500;AGCD01052501 MODEL 8829829 protein-coding Apc APC regulator of WNT signaling pathway ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); dynein complex binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis specification (ortholog); axonogenesis (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Abdominal Fibromatosis (ortholog); Aberrant Crypt Foci (ortholog); acinar cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); axonal growth cone (ortholog) NW_004955418 2567804 2675062 - 102010905 AGCD01018773;GBDF01009002;XM_005382146;XM_005382148;XM_013512936;XM_013512937;XM_013512938;XM_013512940;XM_013512941;XM_013512942;XM_013512943 XP_005382203;XP_005382205;XP_013368390;XP_013368391;XP_013368392;XP_013368394;XP_013368395;XP_013368396;XP_013368397 MODEL 8882099 protein-coding Carhsp1 calcium regulated heat stable protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN regulation of mRNA stability (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); sarcoma (ortholog); FOUND IN cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog); P granule (ortholog) NW_004955442 9382360 9388414 + 102015990 AGCD01037679;GBCE01116617;XM_005391211;XM_005391213;XM_013517835 XP_005391268;XP_005391270;XP_013373289 MODEL 8770648 protein-coding Ccnl1 cyclin L1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); regulation of RNA splicing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cyclin L-CDK11 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog) NW_004955448 8112774 8125912 - 102021926 AGCD01041436;AGCD01041437;GBCQ01070200;GBDK01003148;XM_013518630 XP_013374084 MODEL 39132015 rrna 5S_rRNA 5S ribosomal RNA 39134027 misc_rna 7SK 7SK RNA 8964994 protein-coding Kcng3 potassium voltage-gated channel modifier subfamily G member 3 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN regulation of potassium ion transmembrane transport (ortholog); regulation of potassium ion transport (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); Lynch syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955441 9813391 9859960 - 102022749 AGCD01037035;AGCD01037036;AGCD01037037;AGCD01037038;AGCD01037039;GBDF01114804;XM_005390919 XP_005390976 MODEL 8975653 protein-coding Celf5 CUGBP Elav-like family member 5 INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955495 5182758 5214724 - 102022307 AGCD01061981;AGCD01061982;GBDF01280862;XM_005405838;XM_005405839;XM_005405840;XM_005405841;XM_005405842;XM_005405843;XM_005405844;XM_005405845;XM_013505241;XM_013505242;XM_013505243;XM_013505244;XM_013505245;XM_013505246 XP_005405895;XP_005405896;XP_005405897;XP_005405898;XP_005405899;XP_005405900;XP_005405901;XP_005405902;XP_013360695;XP_013360696;XP_013360697;XP_013360698;XP_013360699;XP_013360700 MODEL 8863145 protein-coding LOC102008089 cystatin-C-like NW_004955415 30698518 30701160 + 102008089 AGCD01016666;GBDJ01009478;XM_005380979 XP_005381036 MODEL 8926591 protein-coding Adra1d adrenoceptor alpha 1D ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure (ortholog); neuron-glial cell signaling (ortholog); norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH acute myeloid leukemia (ortholog); diastolic heart failure (ortholog); polycystic ovary syndrome (ortholog) NW_004955415 15000257 15022712 - 102006451 AGCD01016321;AGCD01016322;GBDK01383489;XM_013512129 XP_013367583 MODEL 8723354 ncrna LOC102010324 uncharacterized LOC102010324 NW_004955403 1876109 1880828 - 102010324 AGCD01001726;GBCQ01179100;XR_259132 MODEL 8750033 protein-coding Ier5l immediate early response 5 like NW_004955570 1479582 1482281 - 102026053 AGCD01074814;AGCD01074815;GBCE01054506;GBCQ01097922;XM_013509437 XP_013364891 MODEL 8792532 protein-coding Lhx5 LIM homeobox 5 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell proliferation in forebrain (ortholog); cell-cell signaling (ortholog); cerebellar Purkinje cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog) NW_004955482 9682671 9691155 - 102018930 AGCD01057581;XM_005403229 XP_005403286 MODEL 8970985 protein-coding LOC102017612 collagen alpha-1(X) chain-like NW_004955570 1578957 1598463 + 102017612 AGCD01074819;AGCD01074820;GBCE01055045;XM_005413619;XM_005413620;XM_005413621;XM_005413622;XM_005413623;XM_013509428;XM_013509429;XM_013509430;XM_013509431;XM_013509432;XM_013509433;XR_001232435;XR_001232436 XP_005413676;XP_005413677;XP_005413678;XP_005413679;XP_005413680;XP_013364882;XP_013364883;XP_013364884;XP_013364885;XP_013364886;XP_013364887 MODEL 8792153 protein-coding Gprasp3 G protein-coupled receptor associated sorting protein family member 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of dendritic spine morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955548 230525 236043 + 102021803 AGCD01072324;AGCD01072325;GBDI01177598;XM_013508530 XP_013363984 MODEL 8706302 protein-coding Emd emerin ENCODES a protein that exhibits actin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cellular response to growth factor stimulus (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); dilated cardiomyopathy 1A (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955580 864532 866904 - 102027697 AGCD01075627;GBDK01089927;XM_005414187 XP_005414244 MODEL 39133894 misc_rna 7SK 7SK RNA 8906178 protein-coding Clk1 CDC like kinase 1 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); peptidyl-threonine phosphorylation (ortholog); peptidyl-tyrosine phosphorylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 655808 665007 + 102002977 AGCD01001702;AGCD01001703;GBBH01031976;XM_005373237;XM_013511835;XM_013511838 XP_005373294;XP_013367289;XP_013367292 MODEL 10135390 protein-coding Brk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell motility (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN lamellipodium (ortholog); SCAR complex (ortholog) NW_004955561 1545921 1554423 + 106147451 AGCD01073856;GBDF01010733;XM_013509100 XP_013364554 MODEL 39133709 misc_rna 7SK 7SK RNA 8927955 protein-coding LOC102009205 olfactory receptor 5AN1-like NW_004955511 3886762 3887700 - 102009205 AGCD01066481;XM_005408267 XP_005408324 MODEL 9057826 protein-coding Erc2 ELKS/RAB6-interacting/CAST family member 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of presynaptic cytosolic calcium ion concentration (ortholog); synapse organization (ortholog); ASSOCIATED WITH lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); Golgi-associated vesicle (ortholog) NW_004955430 5345191 6308909 - 102008018 AGCD01029260;AGCD01029261;AGCD01029262;AGCD01029263;AGCD01029264;AGCD01029265;AGCD01029266;AGCD01029267;AGCD01029268;AGCD01029269;AGCD01029270;AGCD01029271;AGCD01029272;AGCD01029273;AGCD01029274;AGCD01029275;AGCD01029276;AGCD01029277;AGCD01029278;AGCD01029279;AGCD01029280;AGCD01029281;AGCD01029282;AGCD01029283;AGCD01029284;AGCD01029285;GBDI01215309;XM_005387385;XM_005387388;XM_013515684;XM_013515685;XM_013515686;XM_013515687;XM_013515688;XM_013515689;XM_013515690;XR_001234567 XP_005387442;XP_005387445;XP_013371138;XP_013371139;XP_013371140;XP_013371141;XP_013371142;XP_013371143;XP_013371144 MODEL 9019601 protein-coding Hs6st3 heparan sulfate 6-O-sulfotransferase 3 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955404 13461906 14129089 - 102022454 AGCD01003484;AGCD01003485;AGCD01003486;AGCD01003487;AGCD01003488;AGCD01003489;AGCD01003490;AGCD01003491;AGCD01003492;AGCD01003493;AGCD01003494;AGCD01003495;AGCD01003496;AGCD01003497;AGCD01003498;AGCD01003499;AGCD01003500;AGCD01003501;GBDF01021825;GBDF01188326;XM_005374096 XP_005374153 MODEL 39131821 rrna 5S_rRNA 5S ribosomal RNA 9048523 protein-coding Ccdc174 coiled-coil domain containing 174 ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Infantile Hypotonia with Psychomotor Retardation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955429 17201563 17218726 + 102006373 AGCD01028847;AGCD01028848;GBDI01116212;XM_013515548 XP_013371002 MODEL 8709800 pseudo LOC102008454 uncharacterized LOC102008454 NW_004955436 22240028 22281455 + 102008454 AGCD01034088;AGCD01034089 MODEL 8981562 ncrna LOC102004088 uncharacterized LOC102004088 NW_004955425 20438853 20450026 + 102004088 AGCD01025731;GBCB01044195;XR_001234293 MODEL 8733726 protein-coding LOC102011496 RAD52 motif-containing protein 1-like NW_004957952 76 531 + 102011496 AGCD01081348;GBDJ01230466;GBDJ01230469;XM_005415236 XP_005415293 MODEL 8746931 ncrna LOC102009563 uncharacterized LOC102009563 NW_004955403 20142634 20146416 - 102009563 AGCD01002154;XR_259188 MODEL 8862922 ncrna LOC102004473 uncharacterized LOC102004473 NW_004955476 518058 533073 - 102004473 AGCD01055195;GBBH01074467;XR_001230791;XR_001230792;XR_263616 MODEL 8793544 protein-coding Acvr2a activin A receptor type 2A ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); inhibin-betaglycan-ActRII complex (ortholog) NW_004955440 13849926 13931374 + 102022747 AGCD01036454;GBCB01038196;GBDI01068191;XM_005390789 XP_005390846 MODEL 9003787 protein-coding Egln1 egl-9 family hypoxia inducible factor 1 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); heart trabecula formation (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955492 7407800 7454851 + 102007130 AGCD01060797;AGCD01060798;GBCB01005053;GBCQ01067610;XM_005404970 XP_005405027 MODEL 8952634 pseudo LOC102006941 eukaryotic translation initiation factor 5A-2 pseudogene NW_004955433 470536 470996 - 102006941 AGCD01031323 MODEL 8920420 ncrna LOC102012719 uncharacterized LOC102012719 NW_004955403 40191140 40192388 - 102012719 AGCD01002668;AGCD01002669;GBDF01211863;XR_259232 MODEL 8931736 protein-coding Akt3 AKT serine/threonine kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase C binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN brain morphogenesis (ortholog); cellular response to insulin stimulus (ortholog); homeostasis of number of cells within a tissue (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase-Akt signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); capillary hemangioma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955406 6907876 7163672 - 102027606 AGCD01005762;AGCD01005763;AGCD01005764;AGCD01005765;GBCE01188426;XM_005374758;XM_005374759;XM_005374760;XM_013520333 XP_005374815;XP_005374816;XP_005374817;XP_013375787 MODEL 8806893 protein-coding Cables1 Cdk5 and Abl enzyme substrate 1 INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955402 11415913 11514132 + 102019553 AGCD01000300;AGCD01000301;GBCE01064555;GBCQ01094084;XM_013503852 XP_013359306 MODEL 8877767 ncrna LOC102005511 uncharacterized LOC102005511 NW_004955545 2705974 2709122 - 102005511 AGCD01071919;GBDI01034537;XR_001232179;XR_264880 MODEL 8823184 protein-coding Cdc42ep1 CDC42 effector protein 1 INVOLVED IN positive regulation of pseudopodium assembly (ortholog); regulation of cell shape (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955413 23984691 23987753 + 102005581 AGCD01014344;GBCE01054100;GBCQ01122342;XM_005379207 XP_005379264 MODEL 8945721 ncrna LOC102011096 uncharacterized LOC102011096 NW_004955463 13120267 13130733 + 102011096 AGCD01049861;GBBH01212613;XR_001236627 MODEL 8822826 protein-coding LOC102021691 estradiol 17 beta-dehydrogenase 5-like NW_004955429 578697 593487 + 102021691 AGCD01028368;AGCD01028369;GBDF01052126;XM_005386850;XM_005386852 XP_005386907;XP_005386909 MODEL 8837894 protein-coding Trim40 tripartite motif containing 40 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of protein catabolic process (ortholog); negative regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); irritant dermatitis (ortholog); melanoma (ortholog); FOUND IN IkappaB kinase complex (ortholog) NW_004955583 242054 260565 + 102029573 AGCD01075807;AGCD01075808;GBDF01180385;XM_005414342 XP_005414399 MODEL 8768992 protein-coding Dhfr dihydrofolate reductase ENCODES a protein that exhibits dihydrofolate reductase activity (ortholog); dihydrofolic acid binding (ortholog); folate reductase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); axon regeneration (ortholog); dihydrofolate metabolic process (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; dopa responsive dystonia pathway; folate cycle metabolic pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955418 29274170 29283028 + 102014049 AGCD01019455;GBCE01039261;XM_005382314 XP_005382371 MODEL 9061456 protein-coding LOC102010328 putative tripartite motif-containing protein 64C NW_004955790 9857 10650 + 102010328 AGCD01078353;XM_013510192 XP_013365646 MODEL 39134304 misc_rna 7SK 7SK RNA 9011802 protein-coding Il2 interleukin 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); cytokine activity (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN extracellular region (ortholog); interleukin-2 receptor complex (ortholog) NW_004955428 18163010 18168157 + 102015133 AGCD01028056;AGCD01028057;GBBH01190198;XM_005386770 XP_005386827 MODEL 8799976 protein-coding LOC102017615 zinc finger protein 324A NW_004955584 1087372 1099232 + 102017615 AGCD01075978;AGCD01075979;AGCD01075980;GBBH01102143;XM_005414387 XP_005414444 MODEL 8892681 protein-coding Abhd8 abhydrolase domain containing 8 INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog) NW_004955524 924128 932046 + 102027448 AGCD01068727;AGCD01068728;AGCD01068729;GBBH01227340;GBDK01393506;XM_013507241 XP_013362695 MODEL 8827730 protein-coding Ankib1 ankyrin repeat and IBR domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955432 9220318 9358728 + 102028325 AGCD01030898;AGCD01030899;AGCD01030900;AGCD01030901;AGCD01030902;AGCD01030903;AGCD01030904;GBDF01081537;XM_005388006;XM_005388008;XM_005388009;XM_013515948 XP_005388063;XP_005388065;XP_005388066;XP_013371402 MODEL 8959217 protein-coding Dynlt4 dynein light chain Tctex-type 4 ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955464 13417735 13419646 + 102007316 AGCD01050275;GBDI01118775;XM_005398725;XM_005398726;XM_005398727 XP_005398782;XP_005398783;XP_005398784 MODEL 8919582 protein-coding Atp5f1c ATP synthase F1 subunit gamma ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to nitric oxide (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955421 24234473 24253640 + 102008541 AGCD01022209;GBDF01008934;XM_005383875;XM_005383876;XM_005383877;XM_013513724 XP_005383932;XP_005383933;XP_005383934;XP_013369178 MODEL 9023981 protein-coding LOC102006574 profilin-1-like NW_004955475 4545432 4545893 + 102006574 AGCD01054882;GBDF01303632;XM_005401561 XP_005401618 MODEL 9033791 protein-coding LOC102009564 regulator of nonsense transcripts 3A-like NW_004956152 404 2615 - 102009564 AGCD01079146;GBDJ01132460;XM_005415172 XP_005415229 MODEL 8940667 protein-coding LOC102003753 olfactory receptor 51L1-like NW_004955414 21288601 21289554 + 102003753 AGCD01015411;XM_005380082 XP_005380139 MODEL 8745287 protein-coding Apc2 APC regulator of WNT signaling pathway 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); autosomal recessive intellectual developmental disorder 74 (ortholog); Breast Neoplasms (ortholog); FOUND IN actin filament (ortholog); catenin complex (ortholog); cytoplasm (ortholog) NW_004955495 6466434 6489612 - 102003255 AGCD01062082;GBDF01209833;XM_005405966;XM_005405967 XP_005406023;XP_005406024 MODEL 8727140 protein-coding Carm1 coactivator associated arginine methyltransferase 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone H3R17 methyltransferase activity (ortholog); histone H3R2 methyltransferase activity (ortholog); INVOLVED IN endochondral bone morphogenesis (ortholog); estrogen receptor signaling pathway (ortholog); gene expression (ortholog); PARTICIPATES IN androgen signaling pathway; estrogen signaling pathway; histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); asthma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955495 1983599 2002174 + 102028553 AGCD01061743;AGCD01061744;GBDF01009004;XM_005406133 XP_005406190 MODEL 10289397 ncrna LOC106149921 uncharacterized LOC106149921 NW_004955457 9000284 9008289 + 106149921 AGCD01046925;GBDJ01393429;XR_001236399 MODEL 39132016 rrna 5S_rRNA 5S ribosomal RNA 8991842 protein-coding Ccnl2 cyclin L2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); regulation of RNA splicing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cyclin L-CDK11 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); nuclear speck (ortholog) NW_004955486 9423491 9432811 + 102021453 AGCD01059185;GBDJ01079607;XM_005404222;XM_005404223;XM_005404224 XP_005404279;XP_005404280;XP_005404281 MODEL 39134028 misc_rna 7SK 7SK RNA 9050585 protein-coding Kcng4 potassium voltage-gated channel modifier subfamily G member 4 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN regulation of potassium ion transmembrane transport (ortholog); regulation of potassium ion transport (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955564 84772 99125 + 102018236 AGCD01074187;GBBH01085436;XM_005413218 XP_005413275 MODEL 8986054 pseudo LOC102008093 calcium-binding protein 39 pseudogene NW_004955476 5340462 5341052 + 102008093 AGCD01055302 MODEL 8943306 protein-coding Ciao1 cytosolic iron-sulfur assembly component 1 INVOLVED IN iron-sulfur cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH cervical cancer (ortholog); Hereditary Neoplastic Syndromes (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog); MMXD complex (ortholog) NW_004955470 3822606 3828563 + 102015831 AGCD01052712;GBDF01248841;XM_005400655 XP_005400712 MODEL 8932746 protein-coding Adra2a adrenoceptor alpha 2A ENCODES a protein that exhibits adrenergic receptor activity (ortholog); alpha-1B adrenergic receptor binding (ortholog); alpha-2C adrenergic receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); dopaminergic synapse (ortholog) NW_004955485 384405 387332 - 102011547 AGCD01058445;AGCD01058446;GBDI01262926;XM_013504020 XP_013359474 MODEL 8995816 protein-coding Iffo1 intermediate filament family orphan 1 ENCODES a protein that exhibits cytoskeletal adaptor activity (ortholog); INVOLVED IN DNA double-strand break attachment to nuclear envelope (ortholog); double-strand break repair via nonhomologous end joining (ortholog); protein localization to site of double-strand break (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear inner membrane (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) NW_004955413 4167461 4180043 - 102016146 AGCD01013601;GBDJ01313478;XM_005378772;XM_005378774;XM_005378775;XM_005378776;XM_005378777 XP_005378829;XP_005378831;XP_005378832;XP_005378833;XP_005378834 MODEL 8758910 protein-coding Lhx6 LIM homeobox 6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); cerebral cortex neuron differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955419 5835230 5858096 + 102010588 AGCD01019840;GBBH01224881;GBCE01185662;XM_005382538;XM_005382540;XM_013513079;XM_013513080;XM_013513081 XP_005382595;XP_005382597;XP_013368533;XP_013368534;XP_013368535 MODEL 8887320 protein-coding Gprc5a G protein-coupled receptor class C group 5 member A INVOLVED IN negative regulation of epidermal growth factor-activated receptor activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); rheumatoid arthritis (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955413 9765564 9784847 + 102020550 AGCD01013910;AGCD01013911;AGCD01013912;AGCD01013913;GBDK01014848;XM_005378975 XP_005379032 MODEL 9044543 protein-coding Eme1 essential meiotic structure-specific endonuclease 1 ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN double-strand break repair (ortholog); replication fork processing (ortholog); resolution of mitotic recombination intermediates (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); endodeoxyribonuclease complex (ortholog); heterochromatin (ortholog) NW_004955451 11328759 11336099 - 102014521 AGCD01043349;GBDK01116633;XM_005394175;XM_013519096 XP_005394232;XP_013374550 MODEL 8842774 protein-coding Cfap77 cilia and flagella associated protein 77 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955513 1834654 1951827 + 102027216 AGCD01066865;GBBH01031293;XM_005408380 XP_005408437 MODEL 8704283 protein-coding Clk2 CDC like kinase 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN negative regulation of gluconeogenesis (ortholog); peptidyl-tyrosine phosphorylation (ortholog); protein autophosphorylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955545 1716294 1727187 - 102006076 AGCD01071869;GBCE01054181;XM_005411600;XM_005411602;XM_013508341 XP_005411657;XP_005411659;XP_013363795 MODEL 8709971 protein-coding Itm2b integral membrane protein 2B ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway in absence of ligand (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebral amyloid angiopathy (ortholog); cervical cancer (ortholog); FOUND IN endosome membrane (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955431 1928706 1935010 + 102015136 AGCD01029919;GBCC01001251;XM_005387555 XP_005387612 MODEL 8857612 protein-coding Cobll1 cordon-bleu WH2 repeat protein like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955449 9340716 9400049 + 102014628 AGCD01042044;GBCQ01011099;GBCQ01011103;XM_013518787 XP_013374241 MODEL 39133712 misc_rna 7SK 7SK RNA 8995702 protein-coding Fbxo28 F-box protein 28 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); kinetochore (ortholog) NW_004955520 1169624 1198277 - 102010939 AGCD01068047;AGCD01068048;GBCQ01127305;XM_005409230;XM_005409231 XP_005409287;XP_005409288 MODEL 39132017 rrna 5S_rRNA 5S ribosomal RNA 8776985 pseudo LOC102009207 THO complex subunit 4-like NW_004955512 905817 925046 + 102009207 AGCD01066626 MODEL 9014010 protein-coding Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cell development (ortholog); cell population proliferation (ortholog); chromosome organization (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); ERCC4-ERCC1 complex (ortholog) NW_004955555 2393510 2430180 - 102012252 AGCD01073149;AGCD01073150;AGCD01073151;AGCD01073152;AGCD01073153;GBCB01023844;XM_005412522;XM_005412523;XM_005412524;XM_013508709;XM_013508710 XP_005412579;XP_005412580;XP_005412581;XP_013364163;XP_013364164 MODEL 8762860 protein-coding Cdc42ep2 CDC42 effector protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); opioid peptide activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to type II interferon (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); microtubule cytoskeleton (ortholog) NW_004955422 19922179 19928570 - 102011673 AGCD01023048;GBDK01005932;XM_005384501;XM_005384502;XM_013514219;XM_013514220 XP_005384558;XP_005384559;XP_013369673;XP_013369674 MODEL 8833325 protein-coding Hsbp1 heat shock factor binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axonal transport of mitochondrion (ortholog); endodermal cell differentiation (ortholog); muscle contraction (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog) NW_004955564 396985 400975 - 102023643 AGCD01074204;GBDF01008618;XM_005413237;XR_001232387 XP_005413294 MODEL 39131823 rrna 5S_rRNA 5S ribosomal RNA 8864627 ncrna LOC102004091 uncharacterized LOC102004091 NW_004955427 3205789 3215694 + 102004091 AGCD01026926;AGCD01026927;GBDF01288983;XR_001234360 MODEL 9031796 pseudo LOC102011501 60S ribosomal protein L9 pseudogene NW_004955406 3129354 3129909 + 102011501 AGCD01005665 MODEL 39133895 misc_rna 7SK 7SK RNA 8880388 protein-coding Acvr2b activin A receptor type 2B ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type II (ortholog); growth factor binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH Anthracycline-induced Cardiotoxicity (ortholog); Brain Hypoxia-Ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955427 25438652 25467360 - 102005280 AGCD01027540;GBDF01195103;GBDK01307517;XM_005386590;XM_005386591 XP_005386647;XP_005386648 MODEL 8945134 pseudo LOC102012720 translationally-controlled tumor protein pseudogene NW_004955403 40178459 40178980 - 102012720 AGCD01002666 MODEL 8962160 protein-coding Apcdd1 APC down-regulated 1 ENCODES a protein that exhibits identical protein binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN astrocyte cell migration (ortholog); hair follicle development (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hypotrichosis 1 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955402 1932685 1947680 - 102019450 AGCD01000062;GBCE01118898;GBDI01187853;XM_005372586 XP_005372643 MODEL 9000553 protein-coding Cables2 Cdk5 and Abl enzyme substrate 2 INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); gastrulation (ortholog); gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955528 1656475 1674632 + 102028230 AGCD01069567;AGCD01069568;GBCQ01012494;XM_005410021;XM_013507498 XP_005410078;XP_013362952 MODEL 8797341 protein-coding Egln2 egl-9 family hypoxia inducible factor 2 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); ferrous iron binding (ortholog); hypoxia-inducible factor-proline dioxygenase activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); peptidyl-proline hydroxylation to 4-hydroxy-L-proline (ortholog); positive regulation of protein catabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955578 541723 557609 - 102003188 AGCD01075488;AGCD01075489;GBDK01016596;XM_005414013;XM_005414014;XR_265083 XP_005414070;XP_005414071 MODEL 8713337 pseudo LOC102011101 HAUS augmin-like complex subunit 6 pseudogene NW_004955467 12349080 12357812 + 102011101 AGCD01051631;XR_263364 MODEL 9026989 protein-coding Ciao2a cytosolic iron-sulfur assembly component 2A INVOLVED IN iron-sulfur cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH colorectal cancer (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955450 11306099 11327688 + 102019655 AGCD01042653;AGCD01042654;AGCD01042655;GBDF01132346;XM_005393761;XM_005393762;XM_005393763 XP_005393818;XP_005393819;XP_005393820 MODEL 8781231 ncrna LOC102008455 uncharacterized LOC102008455 NW_004955437 7726888 7728942 - 102008455 AGCD01034465;GBDF01111441;XR_261864;XR_261865 MODEL 8785654 pseudo LOC102010330 translationally-controlled tumor protein pseudogene NW_004955452 860898 861359 - 102010330 AGCD01043827 MODEL 9053322 protein-coding Trim41 tripartite motif containing 41 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to muramyl dipeptide (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955530 84683 95835 - 102004002 AGCD01069830;GBCB01060416;XM_005410099 XP_005410156 MODEL 8819446 protein-coding Ccdc175 coiled-coil domain containing 175 ASSOCIATED WITH cholangiocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955466 13225350 13277682 - 102008929 AGCD01051154;AGCD01051155;AGCD01051156;GBDF01127452;XM_013521950;XM_013521951;XR_001236804;XR_001236805 XP_013377404;XP_013377405 MODEL 9066269 protein-coding Dhodh dihydroorotate dehydrogenase (quinone) ENCODES a protein that exhibits dihydroorotate dehydrogenase (quinone) activity (ortholog); dihydroorotate dehydrogenase activity (ortholog); FMN binding (ortholog); INVOLVED IN 'de novo' CTP biosynthetic process (ortholog); 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); 'de novo' UMP biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH beta thalassemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955484 4699743 4713466 + 102017238 AGCD01058230;GBDJ01191379;XM_005403527 XP_005403584 MODEL 39134307 misc_rna 7SK 7SK RNA 8776970 protein-coding Il20 interleukin 20 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-20 receptor binding (ortholog); interleukin-22 receptor binding (ortholog); INVOLVED IN positive regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); cervical cancer (ortholog); end stage renal disease (ortholog); FOUND IN extracellular region (ortholog); interleukin-20 receptor complex (ortholog) NW_004955406 42398510 42401561 + 102008495 AGCD01006706;XM_005375485 XP_005375542 MODEL 8715118 protein-coding Abi1 abl interactor 1 ENCODES a protein that exhibits protein tyrosine kinase activator activity (ortholog); SH3 domain binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); lamellipodium morphogenesis (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell leading edge (ortholog); filopodium tip (ortholog); glutamatergic synapse (ortholog) NW_004955429 2682341 2783752 + 102028665 AGCD01028435;AGCD01028436;AGCD01028437;AGCD01028438;GBDF01119577;XM_005386876;XM_005386878;XM_005386879;XM_005386881;XM_005386882;XM_005386884;XM_005386885;XM_005386886;XM_005386888;XM_005386890;XM_005386891;XM_013515431;XM_013515432 XP_005386933;XP_005386935;XP_005386936;XP_005386938;XP_005386939;XP_005386941;XP_005386942;XP_005386943;XP_005386945;XP_005386947;XP_005386948;XP_013370885;XP_013370886 MODEL 8878455 protein-coding Ankk1 ankyrin repeat and kinase domain containing 1 INVOLVED IN cellular response to retinoic acid (ortholog); regulation of cell cycle process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol-induced mental disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955412 15036071 15046118 + 102008708 AGCD01012865;GBBH01072256;XM_005378145;XM_013511262;XM_013511263 XP_005378202;XP_013366716;XP_013366717 MODEL 8979085 protein-coding LOC102004474 protocadherin beta-2-like NW_004955415 12721832 12776585 - 102004474 AGCD01016225;AGCD01016226;AGCD01016227;AGCD01016228;AGCD01016229;AGCD01016230;AGCD01016231;GBDF01153219;GBDK01431475;XM_013512255 XP_013367709 MODEL 8809824 protein-coding Atp5f1d ATP synthase F1 subunit delta ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN aerobic respiration (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Aortic Calcification (ortholog); Cardiomegaly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955495 6664394 6666693 - 102011018 AGCD01062087;GBDJ01021003;XM_005405992;XM_005405993 XP_005406049;XP_005406050 MODEL 8961019 protein-coding LOC102003754 olfactory receptor 2AG1-like NW_004955414 22578726 22579673 + 102003754 AGCD01015464;XM_005380177 XP_005380234 MODEL 8716137 protein-coding LOC102009565 phosphoinositide-3-kinase-interacting protein 1-like NW_004957624 10 1097 - 102009565 AGCD01081020;GBDJ01181150;GBDK01091793;XM_005415233 XP_005415290 MODEL 9042453 protein-coding Gcm1 GCM transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte fate commitment (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); cell differentiation involved in embryonic placenta development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955411 2872758 2917154 + 102011634 AGCD01011521;AGCD01011522;AGCD01011523;AGCD01011524;GBDF01057346;XM_005377607;XM_005377608;XM_005377609 XP_005377664;XP_005377665;XP_005377666 MODEL 39133714 misc_rna 7SK 7SK RNA 8870892 protein-coding Aktip AKT interacting protein INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); FHF complex (ortholog); HOPS complex (ortholog) NW_004955433 11237717 11248638 - 102027004 AGCD01031649;GBDF01266347;XM_005388297;XM_005388298;XM_005388299;XM_005388300;XM_013516219;XM_013516220;XM_013516221 XP_005388354;XP_005388355;XP_005388356;XP_005388357;XP_013371673;XP_013371674;XP_013371675 MODEL 8784143 ncrna LOC102006577 uncharacterized LOC102006577 NW_004955417 25228937 25242091 - 102006577 AGCD01018475;GBDF01078277;XR_260491 MODEL 39134029 misc_rna 7SK 7SK RNA 8716108 pseudo LOC102008096 60S ribosomal protein L6-like NW_004955477 11186663 11187511 - 102008096 AGCD01055719 MODEL 8751829 protein-coding Kcnh1 potassium voltage-gated channel subfamily H member 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); calmodulin binding (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); monoatomic ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH alexia (ortholog); asthma (ortholog); atrial heart septal defect (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); cell surface (ortholog) NW_004955489 1176615 1549880 + 102016924 AGCD01059830;AGCD01059831;AGCD01059832;AGCD01059833;AGCD01059834;AGCD01059835;AGCD01059836;AGCD01059837;AGCD01059838;AGCD01059839;AGCD01059840;AGCD01059841;AGCD01059842;GBDF01207581;XM_005404511;XM_005404512;XM_013504482 XP_005404568;XP_005404569;XP_013359936 MODEL 8907252 protein-coding Dynlt5 dynein light chain Tctex-type family member 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955423 24125928 24148629 - 102019407 AGCD01024031;GBDF01135150;XM_005385289 XP_005385346 MODEL 39131824 rrna 5S_rRNA 5S ribosomal RNA 8725587 protein-coding Brme1 break repair meiotic recombinase recruitment factor 1 ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); site of double-strand break (ortholog) NW_004955415 32652978 32667873 - 102015838 AGCD01016730;GBBH01138965;XM_013512198;XM_013512199;XM_013512200;XM_013512201;XM_013512202;XM_013512203;XM_013512204;XM_013512205;XM_013512206;XM_013512207 XP_013367652;XP_013367653;XP_013367654;XP_013367655;XP_013367656;XP_013367657;XP_013367658;XP_013367659;XP_013367660;XP_013367661 MODEL 8944498 ncrna LOC102006949 uncharacterized LOC102006949 NW_004955528 1918029 1919886 + 102006949 AGCD01069576;GBCQ01125233;XR_264700 MODEL 8885615 protein-coding Gprc5b G protein-coupled receptor class C group 5 member B ENCODES a protein that exhibits protein kinase activator activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); glucose homeostasis (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); Megalencephalic Leukoencephalopathy with Subcortical Cysts 3 (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog); membrane raft (ortholog) NW_004955442 3548478 3571341 - 102011052 AGCD01037507;GBBH01090860;GBCQ01062670;XM_005391116 XP_005391173 MODEL 8817428 protein-coding LOC102017617 uncharacterized LOC102017617 NW_004955402 9150459 9154214 - 102017617 AGCD01000207;GBDF01245775;XM_005373147 XP_005373204 MODEL 8832697 protein-coding Lhx8 LIM homeobox 8 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN female gonad development (ortholog); forebrain neuron development (ortholog); forebrain neuron differentiation (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN female germ cell nucleus (ortholog) NW_004955423 17644691 17668969 - 102026542 AGCD01023858;AGCD01023859;GBBH01120861;XM_013514370 XP_013369824 MODEL 8907285 protein-coding Eme2 essential meiotic structure-specific endonuclease subunit 2 ENCODES a protein that exhibits DNA endonuclease activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair (ortholog); replication fork processing (ortholog); resolution of mitotic recombination intermediates (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); endodeoxyribonuclease complex (ortholog); nuclear replication fork (ortholog) NW_004955442 15492925 15496639 - 102020060 AGCD01037875;GBBH01185829;XM_005391517 XP_005391574 MODEL 39134310 misc_rna 7SK 7SK RNA 9028195 protein-coding Clk3 CDC like kinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN peptidyl-tyrosine phosphorylation (ortholog); protein autophosphorylation (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955450 3250169 3262977 - 102012262 AGCD01042426;GBBH01118346;XM_005393551;XM_005393552;XM_005393553 XP_005393608;XP_005393609;XP_005393610 MODEL 8788277 protein-coding Carmil1 capping protein regulator and myosin 1 linker 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN actin filament network formation (ortholog); barbed-end actin filament uncapping (ortholog); cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955483 1463856 1770798 - 102003768 AGCD01057646;AGCD01057647;AGCD01057648;AGCD01057649;AGCD01057650;AGCD01057651;GBDF01163343;XM_005403347;XM_013503829;XM_013503830;XM_013503831;XM_013503832 XP_005403404;XP_013359283;XP_013359284;XP_013359285;XP_013359286 MODEL 8797755 protein-coding Coch cochlin ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN regulation of cell shape (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 9 (ortholog); autosomal recessive nonsyndromic deafness 110 (ortholog); Deafness (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955409 29639274 29650389 - 102014987 AGCD01010277;GBCC01001288;GBDF01153053;XM_013510384 XP_013365838 MODEL 8958736 protein-coding Fbxo3 F-box protein 3 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN response to lipopolysaccharide (ortholog); SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955422 12462329 12492030 + 102019923 AGCD01022795;AGCD01022796;GBDF01047754;XM_005384153;XM_005384154;XM_005384155 XP_005384210;XP_005384211;XP_005384212 MODEL 8767896 protein-coding Ccno cyclin O INVOLVED IN cilium assembly (ortholog); mitotic cell cycle (ortholog); multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Ciliary Motility Disorders (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) NW_004955446 12432889 12435435 + 102018997 AGCD01040231;GBDF01250799;XM_005392703 XP_005392760 MODEL 39133715 misc_rna 7SK 7SK RNA 8781246 ncrna LOC102009208 uncharacterized LOC102009208 NW_004955514 376958 384322 + 102009208 AGCD01067008;AGCD01067009;GBDF01062503;XR_264490 MODEL 8944146 protein-coding LOC102021695 olfactory receptor 4A15-like NW_004955511 61146 62063 - 102021695 AGCD01066313;XM_005408176 XP_005408233 MODEL 8761853 protein-coding Hscb HscB mitochondrial iron-sulfur cluster cochaperone ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); iron-sulfur cluster assembly (ortholog); primitive erythrocyte differentiation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955455 3005617 3013393 + 102021942 AGCD01045607;GBDF01160701;XM_005396163 XP_005396220 MODEL 8864479 protein-coding Celf6 CUGBP Elav-like family member 6 INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); synaptic transmission, serotonergic (ortholog); vocalization behavior (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uveal melanoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955450 4822125 4853572 + 102028251 AGCD01042481;AGCD01042482;AGCD01042483;GBDF01191936;XM_005393608;XM_005393609;XM_005393610;XM_013518822;XM_013518823 XP_005393665;XP_005393666;XP_005393667;XP_013374276;XP_013374277 MODEL 9023388 protein-coding Cdc42ep3 CDC42 effector protein 3 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN actin cytoskeleton (ortholog); plasma membrane (ortholog) NW_004955441 5437626 5461085 - 102006613 AGCD01036877;GBDK01130497;XM_005390875 XP_005390932 MODEL 10103369 ncrna LOC106149922 uncharacterized LOC106149922 NW_004955406 12451365 12453416 - 106149922 AGCD01005919;GBDF01009943;XR_001236400 MODEL 8958627 protein-coding Iffo2 intermediate filament family orphan 2 ASSOCIATED WITH cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); thymoma (ortholog) NW_004955527 294950 332716 + 102017494 AGCD01069380;AGCD01069381;GBCE01013302;XM_005409798;XM_005409799 XP_005409855;XP_005409856 MODEL 8711859 ncrna LOC102004093 uncharacterized LOC102004093 NW_004955506 3778930 3780204 - 102004093 AGCD01065319;GBDF01208779;XR_264347 MODEL 8971700 pseudo LOC102011503 10 kDa heat shock protein, mitochondrial pseudogene NW_004955406 38802378 38802693 + 102011503 AGCD01006609 MODEL 8722088 protein-coding Ccdc178 coiled-coil domain containing 178 INVOLVED IN manchette assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) NW_004955402 20076834 20429089 - 102023311 AGCD01000569;AGCD01000570;AGCD01000571;AGCD01000572;AGCD01000573;AGCD01000574;GBDF01123390;XM_005372759;XM_013507772;XM_013507853;XM_013507897;XM_013507911;XM_013507942 XP_005372816;XP_013363226;XP_013363307;XP_013363351;XP_013363365;XP_013363396 MODEL 39133896 misc_rna 7SK 7SK RNA 8708824 protein-coding Itm2c integral membrane protein 2C ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); neuron differentiation (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); lysosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955453 4546736 4557649 - 102025537 AGCD01044692;GBCQ01010113;XM_005395408;XM_005395409 XP_005395465;XP_005395466 MODEL 8880886 protein-coding Acvrl1 activin A receptor like type 1 ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type I (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); artery development (ortholog); blood circulation (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH adenosine deaminase deficiency (ortholog); arteriovenous malformation (ortholog); arteriovenous malformations of the brain (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955547 2278548 2293865 + 102028803 AGCD01072266;GBDK01001484;XM_005411918;XM_005411919;XM_013508491;XM_013508492;XM_013508494;XM_013508495 XP_005411975;XP_005411976;XP_013363945;XP_013363946;XP_013363948;XP_013363949 MODEL 9003751 protein-coding LOC102003755 uncharacterized LOC102003755 NW_004955470 10483806 10485953 - 102003755 AGCD01052870;GBDF01294395;XM_005400841 XP_005400898 MODEL 8907091 ncrna LOC102012723 uncharacterized LOC102012723 NW_004955452 3278140 3282430 + 102012723 AGCD01043918;GBDF01194364;XR_262644 MODEL 8870731 protein-coding Cfap90 cilia and flagella associated protein 90 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axoneme (ortholog); ciliary basal body (ortholog) NW_004955504 5380575 5395166 - 102024141 AGCD01064897;GBDF01044181;XM_013505891 XP_013361345 MODEL 39132018 rrna 5S_rRNA 5S ribosomal RNA 8756076 protein-coding LOC102005515 zinc finger protein 350 NW_004955558 546358 562360 + 102005515 AGCD01073376;GBBH01131689;XM_005412662;XM_005412664;XM_005412665;XM_005412666;XM_005412667;XM_005412668;XM_013508866;XM_013508867 XP_005412719;XP_005412721;XP_005412722;XP_005412723;XP_005412724;XP_005412725;XP_013364320;XP_013364321 MODEL 9007062 ncrna LOC102011112 uncharacterized LOC102011112 NW_004955415 26765225 26765881 - 102011112 AGCD01016604;XR_260318 MODEL 8775674 protein-coding LOC102008105 translation initiation factor IF-2-like NW_004955481 3628568 3637628 - 102008105 AGCD01056909;GBDI01140316;XM_005402923 XP_005402980 MODEL 8991668 protein-coding Adra2b adrenoceptor alpha 2B ENCODES a protein that exhibits adrenergic receptor activity (ortholog); alpha2-adrenergic receptor activity (ortholog); epinephrine binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH Cognitive Dysfunction (ortholog); Cyanosis (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955470 3711075 3714450 - 102014443 AGCD01052708;AJ427271;GBCB01100329;XM_005400651;XM_005400652 CAD20309;XP_005400708;XP_005400709 MODEL 8950643 pseudo LOC102008467 E3 ubiquitin-protein ligase HECTD3 pseudogene NW_004955442 14068251 14074752 - 102008467 AGCD01037801 MODEL 8982033 protein-coding Trim42 tripartite motif containing 42 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955508 4959495 4984166 - 102023058 AGCD01065897;GBDF01089541;XM_005407776 XP_005407833 MODEL 9019867 pseudo LOC102010333 U1 small nuclear ribonucleoprotein C pseudogene NW_004955453 8264707 8265255 + 102010333 AGCD01044758;XM_005395715 MODEL 8787224 protein-coding Dhps deoxyhypusine synthase ENCODES a protein that exhibits deoxyhypusine synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); peptidyl-hypusine biosynthetic process (ortholog); positive regulation of T cell proliferation (ortholog); ASSOCIATED WITH epilepsy (ortholog); Neurodevelopmental Disorder with Seizures and Speech and Walking Impairment (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955415 31778632 31782782 - 102017865 AGCD01016697;GBDK01188232;XM_005381015 XP_005381072 MODEL 9027875 protein-coding Abi2 abl interactor 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell migration (ortholog); dendrite development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); high grade glioma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); cytoplasm (ortholog) NW_004955457 11451851 11562692 - 102023229 AGCD01046970;AGCD01046971;AGCD01046972;AGCD01046973;GBCB01057114;GBCQ01070270;XM_005397017;XM_005397018;XM_005397019;XM_005397020;XM_005397021;XM_005397022;XM_005397023;XM_005397024;XM_005397025;XM_005397028;XM_005397029;XM_013520694 XP_005397074;XP_005397075;XP_005397076;XP_005397077;XP_005397078;XP_005397079;XP_005397080;XP_005397081;XP_005397082;XP_005397085;XP_005397086;XP_013376148 MODEL 9030957 pseudo LOC102004476 uncharacterized LOC102004476 NW_004955476 7152638 7163867 + 102004476 AGCD01055347 MODEL 8773040 protein-coding Clk4 CDC like kinase 4 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN peptidyl-tyrosine phosphorylation (ortholog); protein autophosphorylation (ortholog); regulation of RNA splicing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955408 1726283 1747314 + 102010028 AGCD01007975;AGCD01007976;GBBH01031978;GBCC01000229;XM_013508000 XP_013363454 MODEL 8940674 protein-coding Cabp1 calcium binding protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of cell communication by electrical coupling (ortholog); negative regulation of protein import into nucleus (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); melanoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955455 11000763 11068922 - 102007300 AGCD01045974;AGCD01045975;AGCD01045976;AGCD01045977;AGCD01045978;GBDF01187384;XM_005396494;XM_005396495;XM_005396496 XP_005396551;XP_005396552;XP_005396553 MODEL 8869078 protein-coding Alad aminolevulinate dehydratase ENCODES a protein that exhibits identical protein binding (ortholog); lead ion binding (ortholog); porphobilinogen synthase activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lead ion (ortholog); heme A biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); ALAD-Deficiency Porphyria (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog) NW_004955419 14093010 14104376 + 102022295 AGCD01020012;GBCE01055436;XM_005382674;XM_005382675;XM_013513133;XM_013513134 XP_005382731;XP_005382732;XP_013368587;XP_013368588 MODEL 8843732 protein-coding Egln3 egl-9 family hypoxia inducible factor 3 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); hypoxia-inducible factor-proline dioxygenase activity (ortholog); peptidyl-proline 4-dioxygenase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of ferroptosis (ortholog); peptidyl-proline hydroxylation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955409 26939933 26967156 + 102007741 AGCD01010203;GBCQ01004650;XM_005376943 XP_005377000 MODEL 8704588 protein-coding Apcdd1l APC down-regulated 1 like ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955445 1025597 1070385 + 102020172 AGCD01039328;AGCD01039329;GBBH01147400;GBCE01148194;XM_013518260 XP_013373714 MODEL 8944361 protein-coding Fbxo30 F-box protein 30 INVOLVED IN centrosome cycle (ortholog); chromatin organization (ortholog); chromosome condensation (ortholog) NW_004955436 14837162 14842615 + 102029439 AGCD01033878;GBDF01051890;GBDJ01386563;XM_005389230 XP_005389287 MODEL 39134030 misc_rna 7SK 7SK RNA 8896197 protein-coding Ccnp cyclin P ASSOCIATED WITH lung cancer (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN nucleus (ortholog) NW_004955578 1009159 1013368 + 102026489 AGCD01075504;GBDI01374425;XM_005414093 XP_005414150 MODEL 8751525 protein-coding Ciao2b cytosolic iron-sulfur assembly component 2B INVOLVED IN chromosome segregation (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Prostate Cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955433 23435373 23437383 - 102028007 AGCD01031962;GBDJ01268522;XM_005388490 XP_005388547 MODEL 8918371 protein-coding Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ENCODES a protein that exhibits actin binding (ortholog); cyclin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); cardiac muscle hypertrophy (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH allergic disease (ortholog); allergic rhinitis (ortholog); amblyopia (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955407 36456628 36588940 + 102015174 AGCD01007769;AGCD01007770;AGCD01007771;GBDF01046753;GBDK01234122;XM_005375747;XM_005375749;XM_005375750;XM_005375751;XM_013504724 XP_005375804;XP_005375806;XP_005375807;XP_005375808;XP_013360178 MODEL 39131825 rrna 5S_rRNA 5S ribosomal RNA 8848861 ncrna LOC102006956 uncharacterized LOC102006956 NW_004955438 989747 1006079 + 102006956 AGCD01034966;AGCD01034967;AGCD01034968;GBDF01002597;XR_001235135;XR_261908;XR_261909 MODEL 8984576 protein-coding LOC102009569 protocadherin-8 NW_004955404 50763263 50767330 + 102009569 AGCD01004536;AGCD01004537;GBDF01044218;XM_005374213;XM_013516742 XP_005374270;XP_013372196 MODEL 8922714 protein-coding Ankle1 ankyrin repeat and LEM domain containing 1 ENCODES a protein that exhibits cobalt ion binding (ortholog); DNA endonuclease activity (ortholog); endonuclease activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); midbody (ortholog) NW_004955524 933200 936933 - 102027783 AGCD01068729;GBBH01173695;GBBH01210562;XM_005409673 XP_005409730 MODEL 8974844 ncrna LOC102017621 uncharacterized LOC102017621 NW_004955451 11658116 11663081 + 102017621 AGCD01043362;GBCE01179796;XR_001235940;XR_262592 MODEL 8717743 protein-coding Gprc5c G protein-coupled receptor class C group 5 member C ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955553 1303176 1315482 + 102007816 AGCD01072878;GBCB01003226;XM_005412233;XM_013508636 XP_005412290;XP_013364090 MODEL 8826103 protein-coding Il20ra interleukin 20 receptor subunit alpha ENCODES a protein that exhibits interleukin-20 binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-19-mediated signaling pathway (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955436 22281422 22323242 + 102020707 AGCD01034089;AGCD01034090;AGCD01034091;AGCD01034092;AGCD01034093;GBBH01193661;XM_005389282;XM_005389283;XM_005389284;XM_013516702 XP_005389339;XP_005389340;XP_005389341;XP_013372156 MODEL 9065422 protein-coding Lhx9 LIM homeobox 9 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); female gonad development (ortholog); gonad morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog) NW_004955406 34341972 34363351 + 102026828 AGCD01006501;GBDJ01206517;XM_005375125;XM_005375126;XM_005375128;XM_005375129;XM_005375131;XM_013521911;XM_013521921;XM_013521925 XP_005375182;XP_005375183;XP_005375185;XP_005375186;XP_005375188;XP_013377365;XP_013377375;XP_013377379 MODEL 39134313 misc_rna 7SK 7SK RNA 8764323 protein-coding Emg1 EMG1 N1-specific pseudouridine methyltransferase ENCODES a protein that exhibits identical protein binding (ortholog); rRNA (pseudouridine) methyltransferase activity (ortholog); INVOLVED IN blastocyst development (ortholog); nucleologenesis (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Bowen-Conradi syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955413 4563864 4570809 + 102010240 AGCD01013621;GBDJ01228048;XM_005378851 XP_005378908 MODEL 9036153 protein-coding Brms1 BRMS1 transcriptional repressor and anoikis regulator ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of anoikis (ortholog); positive regulation of protein deacetylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 18981984 18989730 + 102014370 AGCD01022970;GBDJ01187942;XM_005384413;XM_005384415;XM_005384417;XM_013514159 XP_005384470;XP_005384472;XP_005384474;XP_013369613 MODEL 9057995 protein-coding Cog1 component of oligomeric golgi complex 1 INVOLVED IN Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN COG complex (ortholog); Golgi apparatus (ortholog) NW_004955478 19558 38905 - 102016263 AGCD01055730;GBCE01005108;XM_005402088;XM_013503229 XP_005402145;XP_013358683 MODEL 8744767 protein-coding LOC102006578 olfactory receptor 1Q1-like NW_004955419 5347299 5348225 - 102006578 AGCD01019802;XM_005382525 XP_005382582 MODEL 39133716 misc_rna 7SK 7SK RNA 8955450 pseudo LOC102021699 protein SET-like NW_004955523 1341486 1342336 - 102021699 AGCD01068514 MODEL 8888636 protein-coding Kcnh2 potassium voltage-gated channel subfamily H member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to xenobiotic stimulus (ortholog); membrane depolarization during action potential (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Alstrom syndrome (ortholog); anxiety disorder (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); inward rectifier potassium channel complex (ortholog) NW_004955491 5391444 5422241 - 102027312 AGCD01060482;GBDF01123064;GBDJ01376241;XM_005404800 XP_005404857 MODEL 8880213 protein-coding Cdc42ep4 CDC42 effector protein 4 INVOLVED IN cellular response to type II interferon (ortholog); positive regulation of pseudopodium assembly (ortholog); regulation of cell shape (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytoplasm (ortholog) NW_004955553 311725 335125 - 102030574 AGCD01072853;AGCD01072854;GBCB01087929;XM_005412217;XM_005412218;XM_005412219;XM_005412220 XP_005412274;XP_005412275;XP_005412276;XP_005412277 MODEL 8767484 protein-coding Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 ENCODES a protein that exhibits 11-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); NADP binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); glucocorticoid biosynthetic process (ortholog); glucocorticoid catabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH Abdominal Obesity (ortholog); allergic contact dermatitis (ortholog); coronary artery disease (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955489 2500928 2524715 - 102024016 AGCD01059871;GBDJ01212897;XM_005404538 XP_005404595 MODEL 8716485 protein-coding Ifi16 interferon gamma inducible protein 16 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); identical protein binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Experimental Liver Cirrhosis (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear inclusion body (ortholog) NW_004955468 10828726 10845853 + 102029846 AGCD01052105;GBDI01294199;XM_013522456;XM_013522457;XR_001236915 XP_013377910;XP_013377911 MODEL 9000032 ncrna LOC102004095 uncharacterized LOC102004095 NW_004955507 3788141 3791465 + 102004095 AGCD01065637;GBBH01163274;XR_001231638 MODEL 8927989 protein-coding LOC102011504 keratin-associated protein 8-1 NW_004955407 30527468 30528014 - 102011504 AGCD01007636;XM_005375654 XP_005375711 MODEL 8841458 protein-coding Ccdc179 coiled-coil domain containing 179 NW_004955476 3243974 3250305 - 102011113 AGCD01055240;GBDK01356477;XM_005401737 XP_005401794 MODEL 8772718 protein-coding Atp5f1e ATP synthase F1 subunit epsilon ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Fluoride Poisoning (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 3 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955445 563642 567865 + 102018537 AGCD01039320;GBDK01015787;XM_005392211 XP_005392268 MODEL 39133897 misc_rna 7SK 7SK RNA 39131538 protein-coding ABI3 ABI family member 3 8935774 pseudo LOC102012724 ras-related protein Rab-5A pseudogene NW_004955404 17557735 17563974 - 102012724 AGCD01003594 MODEL 8772801 protein-coding Itpa inosine triphosphatase ENCODES a protein that exhibits dITP diphosphatase activity (ortholog); identical protein binding (ortholog); ITP diphosphatase activity (ortholog); INVOLVED IN chromosome organization (ortholog); ITP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); anemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955415 14106786 14121975 + 102024997 AGCD01016286;AGCD01016287;AGCD01016288;GBBH01145430;XM_005380786 XP_005380843 MODEL 8801982 protein-coding LOC102003756 olfactory receptor 52E8-like NW_004955414 21787675 21788613 + 102003756 AGCD01015432;XM_005380430 XP_005380487 MODEL 39132020 rrna 5S_rRNA 5S ribosomal RNA 8876460 protein-coding LOC102009212 uncharacterized LOC102009212 NW_004955436 1320800 1334990 - 102009212 AGCD01033575;GBDK01015463;XM_013516600;XR_001234945;XR_001234946;XR_001234947;XR_001234948;XR_001234949;XR_261735;XR_261738 XP_013372054 MODEL 8811495 protein-coding Cfap91 cilia and flagella associated protein 91 INVOLVED IN axonemal central apparatus assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955427 19389866 19451136 + 102021464 AGCD01027366;AGCD01027367;AGCD01027368;AGCD01027369;AGCD01027370;AGCD01027371;AGCD01027372;AGCD01027373;GBDF01084601;XM_005386455;XM_005386456;XM_013515177 XP_005386512;XP_005386513;XP_013370631 MODEL 8737826 protein-coding Alas1 5'-aminolevulinate synthase 1 ENCODES a protein that exhibits 5-aminolevulinate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955532 3810469 3823456 + 102026794 AGCD01070299;GBDF01085642;GBDK01069646;XM_005410344 XP_005410401 MODEL 9054138 protein-coding LOC102005516 uncharacterized LOC102005516 NW_004955442 7211768 7238684 + 102005516 AGCD01037621;XM_013517646 XP_013373100 MODEL 8995647 protein-coding Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); bone mineralization (ortholog); cell population proliferation (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acquired immunodeficiency syndrome (ortholog); acute leukemia (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cytoplasm (ortholog); MMXD complex (ortholog) NW_004955555 2355005 2369599 - 102009659 AGCD01073148;GBDF01126874;XM_005412511;XM_005412512;XM_013508701 XP_005412568;XP_005412569;XP_013364155 MODEL 8700349 ncrna LOC102008106 uncharacterized LOC102008106 NW_004955482 4507858 4511301 + 102008106 AGCD01057294;GBDF01156183;XR_001230999 MODEL 9052746 protein-coding Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 INVOLVED IN anterior/posterior pattern specification (ortholog); apical protein localization (ortholog); establishment of body hair planar orientation (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH arteriovenous malformation (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955413 30455194 30561124 - 102011857 AGCD01014608;AGCD01014609;AGCD01014610;GBBH01034252;GBDI01067978;XM_013511386;XM_013511387 XP_013366840;XP_013366841 MODEL 8849439 protein-coding Fbxo31 F-box protein 31 ENCODES a protein that exhibits cyclin binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cellular response to oxidative stress (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 45 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955541 1811010 1828734 - 102025942 AGCD01071388;GBCB01007487;XM_005411001;XM_013507983 XP_005411058;XP_013363437 MODEL 8860724 protein-coding LOC102008468 vomeronasal type-2 receptor 116-like NW_004955563 153803 168288 + 102008468 AGCD01074047;AGCD01074048;AGCD01074049;XM_005413196 XP_005413253 MODEL 8716119 protein-coding Trim44 tripartite motif containing 44 INVOLVED IN negative regulation of protein K48-linked ubiquitination (ortholog); positive regulation of cytokine-mediated signaling pathway (ortholog); positive regulation of defense response to virus by host (ortholog); ASSOCIATED WITH aniridia (ortholog); Aniridia 3 (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 10580002 10690349 - 102008739 AGCD01022741;AGCD01022742;AGCD01022743;GBCB01005350;XM_005384121 XP_005384178 MODEL 8987781 protein-coding Dhrs1 dehydrogenase/reductase 1 ENCODES a protein that exhibits carbonyl reductase (NADPH) activity (ortholog); oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955409 36002576 36040595 + 102018811 AGCD01010438;AGCD01010439;AGCD01010440;GBCE01000652;GBDK01020457;XM_013510399 XP_013365853 MODEL 8995972 protein-coding Gcm2 GCM transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); intracellular calcium ion homeostasis (ortholog); intracellular phosphate ion homeostasis (ortholog); ASSOCIATED WITH familial isolated hypoparathyroidism (ortholog); familial isolated hypoparathyroidism 1 (ortholog); familial isolated hypoparathyroidism 2 (ortholog); FOUND IN nucleus (ortholog) NW_004955465 3523029 3530342 + 102019373 AGCD01050381;GBDI01283548;XM_005398830 XP_005398887 MODEL 9060390 protein-coding Acy1 aminoacylase 1 ENCODES a protein that exhibits aminoacylase activity (ortholog); formylmethionine deformylase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Aminoacylase 1 Deficiency (ortholog); pre-malignant neoplasm (ortholog); renal cell carcinoma (ortholog); FOUND IN extracellular exosome (ortholog) NW_004955532 3627314 3631799 + 102025286 AGCD01070292;GBCE01096162;GBDI01083282;XM_005410340 XP_005410397 MODEL 8873518 pseudo LOC102004478 beta-galactosidase-like NW_004955416 3761907 3786720 + 102004478 AGCD01016876 MODEL 8927178 protein-coding Lias lipoic acid synthetase ENCODES a protein that exhibits lipoate synthase activity (ortholog); INVOLVED IN inflammatory response (ortholog); lipoate biosynthetic process (ortholog); neural tube closure (ortholog); ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955443 7889274 7907560 - 102027352 AGCD01038301;GBCQ01040238;XM_005391982;XM_005391983;XM_005391985 XP_005392039;XP_005392040;XP_005392042 MODEL 8812902 protein-coding Ankle2 ankyrin repeat and LEM domain containing 2 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN central nervous system development (ortholog); mitotic nuclear membrane reassembly (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955482 322251 353918 + 102018600 AGCD01057169;AGCD01057170;AGCD01057171;GBCE01114610;GBCQ01058651;XM_005402948 XP_005403005 MODEL 8832144 protein-coding Carmil2 capping protein regulator and myosin 1 linker 2 ENCODES a protein that exhibits phospholipid binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin filament network formation (ortholog); establishment of protein localization (ortholog); establishment or maintenance of cell polarity (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); Breast Cancer, Familial (ortholog); colitis (ortholog); FOUND IN actin cytoskeleton (ortholog); cell leading edge (ortholog); cell-cell junction (ortholog) NW_004955484 9025409 9037942 - 102008110 AGCD01058403;AGCD01058404;GBDJ01349439;GBDJ01349447;XM_013503950;XM_013503951;XM_013503952;XM_013503953 XP_013359404;XP_013359405;XP_013359406;XP_013359407 MODEL 8859786 protein-coding Egr1 early growth response 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to antibiotic (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN long term potentiation; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); aortic valve stenosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955418 2001509 2005269 - 102026526 AGCD01018737;GBBH01033334;GBBH01033337;XM_005382100 XP_005382157 MODEL 8836186 ncrna LOC102011114 uncharacterized LOC102011114 NW_004955416 28362023 28367569 + 102011114 AGCD01017627;GBCQ01114433;XR_001233378;XR_001233379;XR_260430;XR_260431;XR_260433 MODEL 39134031 misc_rna 7SK 7SK RNA 8713032 protein-coding Hsd11b1l hydroxysteroid 11-beta dehydrogenase 1 like ENCODES a protein that exhibits cortisol dehydrogenase (NADP+) activity (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955495 3732550 3733625 - 102025022 AGCD01061879;GBDF01061504;XM_013505053 XP_013360507 MODEL 9008644 ncrna LOC102006962 uncharacterized LOC102006962 NW_004955442 18374768 18409901 + 102006962 AGCD01038005;AGCD01038006;GBCE01069332;XR_262164 MODEL 9018971 protein-coding Ciao3 cytosolic iron-sulfur assembly component 3 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); intracellular oxygen homeostasis (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955442 16465759 16475110 + 102018656 AGCD01037901;GBDK01237086;XM_005391615 XP_005391672 MODEL 8832297 protein-coding Ifi30 IFI30 lysosomal thiol reductase ENCODES a protein that exhibits oxidoreductase activity, acting on a sulfur group of donors (ortholog); oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); negative regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) NW_004955524 3229024 3230955 - 102010831 AGCD01068868;GBBH01004304;GBCB01022981;XM_013507264 XP_013362718 MODEL 9055627 pseudo LOC102009574 40S ribosomal protein S12 pseudogene NW_004955406 11910786 11911430 - 102009574 AGCD01005898 MODEL 8864262 protein-coding Gprc5d G protein-coupled receptor class C group 5 member D FOUND IN plasma membrane (ortholog) NW_004955413 9805848 9815616 - 102020899 AGCD01013913;XM_005378976;XM_005378977 XP_005379033;XP_005379034 MODEL 39131356 protein-coding IL20RB interleukin 20 receptor subunit beta 9007832 protein-coding Abi3 ABI family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of lamellipodium assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) NW_004955451 12241084 12248857 - 102014000 AGCD01043379;AGCD01043380;GBDI01171609;XM_013519066 XP_013374520 MODEL 8874398 protein-coding LOC102006963 sialic acid-binding Ig-like lectin 14 NW_004955558 1289644 1293742 - 102006963 AGCD01073431;GBDK01013795;XM_005412746 XP_005412803 MODEL 8775166 ncrna LOC102012730 uncharacterized LOC102012730 NW_004955407 18730128 18738547 + 102012730 AGCD01007275;GBDF01261213;XR_259575 MODEL 8778942 protein-coding Itpk1 inositol-tetrakisphosphate 1-kinase ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 6-kinase activity (ortholog); inositol-1,3,4-trisphosphate 5-kinase activity (ortholog); inositol-1,3,4-trisphosphate 6-kinase activity (ortholog); INVOLVED IN necroptotic process (ortholog); neural tube development (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955438 15107992 15257730 - 102030346 AGCD01035359;GBDF01124582;XM_005390340;XM_013517236;XM_013517237 XP_005390397;XP_013372690;XP_013372691 MODEL 10083655 protein-coding Adrb1 adrenoceptor beta 1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); amine binding (ortholog); beta1-adrenergic receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Anaphylaxis (ortholog); Angina Pectoris (ortholog); aortic valve stenosis (ortholog); FOUND IN early endosome (ortholog); membrane (ortholog); neuronal dense core vesicle (ortholog) NW_004955431 19025663 19027026 + 106148883 AGCD01030439;GBBH01188166;GBDI01054371;XM_013515887 XP_013371341 MODEL 8820757 protein-coding Brms1l BRMS1 like transcriptional repressor ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955409 25286312 25319557 - 102027153 AGCD01010110;AGCD01010111;AGCD01010112;GBDI01025327;XM_005376913 XP_005376970 MODEL 39133724 misc_rna 7SK 7SK RNA 8925710 protein-coding Clmn calmin INVOLVED IN negative regulation of cell population proliferation (ortholog); neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955438 17258145 17335443 + 102017815 AGCD01035437;AGCD01035438;AGCD01035439;GBBH01051082;XM_005390382;XM_005390383;XM_005390384;XM_013517199;XR_261944 XP_005390439;XP_005390440;XP_005390441;XP_013372653 MODEL 8728101 protein-coding Apcs amyloid P component, serum ENCODES a protein that exhibits calcium ion binding (ortholog); complement component C1q complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); negative regulation of glycoprotein metabolic process (ortholog); ASSOCIATED WITH amyloidosis (ortholog); congestive heart failure (ortholog); coronary artery disease (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955468 11388154 11389259 + 102006894 AGCD01052129;GBDK01049342;XM_005400172 XP_005400229 MODEL 8893552 pseudo LOC102006579 histone H2A type 1-H-like NW_004955483 1224848 1228126 + 102006579 AGCD01057644 MODEL 8836426 protein-coding LOC102021700 ubiquitin-conjugating enzyme E2 D4-like NW_004955525 2619948 2620976 - 102021700 AGCD01069098;GBDF01225732;XM_005409736 XP_005409793 MODEL 9027228 ncrna LOC102010334 uncharacterized LOC102010334 NW_004955406 19328963 19363689 - 102010334 AGCD01006077;GBDF01119607;XR_001236563;XR_001236565;XR_001236566;XR_001236567;XR_001236568;XR_001236569 MODEL 39131826 rrna 5S_rRNA 5S ribosomal RNA 9027260 protein-coding Ccnq cyclin Q ENCODES a protein that exhibits protein kinase activator activity (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); regulation of cell cycle G2/M phase transition (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955580 336681 349435 - 102012381 AGCD01075596;AGCD01075597;GBDJ01228737;XM_005414126;XM_005414127;XM_005414128 XP_005414183;XP_005414184;XP_005414185 MODEL 8862798 protein-coding Kcnh3 potassium voltage-gated channel subfamily H member 3 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); melanoma (ortholog); stomach cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955547 163130 180792 + 102030127 AGCD01072136;GBBH01187924;GBBH01187926;XM_005411830 XP_005411887 MODEL 8869504 pseudo LOC102008107 olfactory receptor 56-like NW_004955418 29732474 29747780 + 102008107 AGCD01019481 MODEL 9065380 protein-coding Cdc42se1 CDC42 small effector 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cell junction (ortholog) NW_004955588 423091 440248 - 102023861 AGCD01076109;AGCD01076110;GBCE01056319;XM_005414490;XM_013509906 XP_005414547;XP_013365360 MODEL 10383557 ncrna LOC106149923 uncharacterized LOC106149923 NW_004955457 10005195 10025117 + 106149923 AGCD01046947;XR_001236402;XR_001236403 MODEL 8842198 protein-coding Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN apoptotic process (ortholog); DNA repair (ortholog); DNA topological change (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); asphyxia neonatorum (ortholog); FOUND IN nucleoplasm (ortholog); transcription factor TFIID complex (ortholog); transcription factor TFIIH core complex (ortholog) NW_004955459 3210936 3238401 + 102005903 AGCD01048010;AGCD01048011;GBDJ01135141;XM_005397616;XM_005397617;XM_013521085 XP_005397673;XP_005397674;XP_013376539 MODEL 8872121 ncrna LOC102011505 uncharacterized LOC102011505 NW_004955456 6097044 6102845 - 102011505 AGCD01046363;GBDF01134376;XR_262883 MODEL 8927885 ncrna LOC102004097 uncharacterized LOC102004097 NW_004955429 17006214 17015442 + 102004097 AGCD01028844;GBDJ01386401;XR_001234486;XR_001234487;XR_001234488;XR_001234489;XR_001234490;XR_261341;XR_261342;XR_261343;XR_261344;XR_261345;XR_261346;XR_261347 MODEL 8706098 protein-coding Ccdc18 coiled-coil domain containing 18 INVOLVED IN positive regulation of adipose tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriolar satellite (ortholog) NW_004955423 1357515 1423094 - 102019613 AGCD01023433;AGCD01023434;GBDF01187769;XM_013514360 XP_013369814 MODEL 39134316 misc_rna 7SK 7SK RNA 39133898 misc_rna 7SK 7SK RNA 9041833 protein-coding Atp5if1 ATP synthase inhibitory factor subunit 1 ENCODES a protein that exhibits angiostatin binding (ortholog); ATPase binding (ortholog); ATPase inhibitor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); heme biosynthetic process (ortholog); mitochondrial depolarization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); mitochondrion (ortholog) NW_004955452 7372917 7375072 + 102013899 AGCD01044147;GBDF01007352;XM_005394945 XP_005395002 MODEL 9006122 protein-coding Trim45 tripartite motif containing 45 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN bone development (ortholog); negative regulation of inflammatory response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955435 20216685 20225061 - 102006946 AGCD01033447;GBDF01194974;XM_005389053 XP_005389110 MODEL 8876558 protein-coding Cabp2 calcium binding protein 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN sensory perception of sound (ortholog); visual perception (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive nonsyndromic deafness 93 (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955422 17967313 17972468 + 102013306 AGCD01022933;XM_005384309;XM_005384310 XP_005384366;XP_005384367 MODEL 9003765 ncrna LOC102004479 uncharacterized LOC102004479 NW_004955480 6033165 6036994 - 102004479 AGCD01056677;GBDF01220406;XR_001230890 MODEL 8975423 protein-coding Acy3 aminoacylase 3 ENCODES a protein that exhibits aminoacylase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lymphoma (ortholog); melanoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955422 17852295 17856946 + 102010063 AGCD01022932;GBCQ01010215;XM_005384297;XM_005384298 XP_005384354;XP_005384355 MODEL 8702642 protein-coding Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); myoblast fusion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 3 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955578 1187128 1195574 + 102022981 AGCD01075511;GBDF01008859;XM_005414085;XM_005414086;XM_005414087;XM_005414088;XM_005414089;XM_005414090 XP_005414142;XP_005414143;XP_005414144;XP_005414145;XP_005414146;XP_005414147 MODEL 8712631 ncrna LOC102009219 uncharacterized LOC102009219 NW_004955438 11481547 11499549 - 102009219 AGCD01035239;AGCD01035240;GBDF01306429;XR_261927 MODEL 8791025 pseudo LOC102005525 protein kinase C iota type pseudogene NW_004955445 18126528 18128715 + 102005525 AGCD01039898 MODEL 8802380 protein-coding Abi3bp ABI family member 3 binding protein ENCODES a protein that exhibits actin filament binding (ortholog); collagen binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN dendritic shaft (ortholog); dendritic spine (ortholog); extracellular matrix (ortholog) NW_004955427 2362403 2581970 - 102024481 AGCD01026897;AGCD01026898;AGCD01026899;GBDK01304717;XM_005386307;XM_005386313;XM_013515130;XM_013515131;XM_013515132;XM_013515133;XM_013515134;XM_013515135;XM_013515136;XM_013515137;XM_013515138;XM_013515139;XM_013515140;XM_013515141;XM_013515142;XM_013515143;XM_013515144;XM_013515145;XM_013515146;XM_013515147;XM_013515148;XM_013515149;XM_013515150;XM_013515151;XM_013515152;XM_013515153;XM_013515154;XM_013515155 XP_005386364;XP_005386370;XP_013370584;XP_013370585;XP_013370586;XP_013370587;XP_013370588;XP_013370589;XP_013370590;XP_013370591;XP_013370592;XP_013370593;XP_013370594;XP_013370595;XP_013370596;XP_013370597;XP_013370598;XP_013370599;XP_013370600;XP_013370601;XP_013370602;XP_013370603;XP_013370604;XP_013370605;XP_013370606;XP_013370607;XP_013370608;XP_013370609 MODEL 8850365 protein-coding Alas2 5'-aminolevulinate synthase 2 ENCODES a protein that exhibits 5-aminolevulinate synthase activity (ortholog); coenzyme A binding (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); heme B biosynthetic process (ortholog); heme biosynthetic process (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); anemia (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955475 2362368 2382680 - 102026315 AGCD01054801;GBBH01034987;XM_005401537;XM_005401538 XP_005401594;XP_005401595 MODEL 8717346 protein-coding Apeh acylaminoacyl-peptide hydrolase ENCODES a protein that exhibits identical protein binding (ortholog); omega peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955532 1580473 1590274 + 102015239 AGCD01070195;GBDF01119664;XM_005410206 XP_005410263 MODEL 9049036 protein-coding Fbxo32 F-box protein 32 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); muscle atrophy (ortholog); negative regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cholangiocarcinoma (ortholog); familial hypertrophic cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955540 2309315 2334735 - 102003485 AGCD01071319;GBBH01142971;GBDK01430506;XM_005410930 XP_005410987 MODEL 8860274 protein-coding LOC102017623 uncharacterized LOC102017623 NW_004955451 17616484 17619800 + 102017623 AGCD01043763;XM_005394540 XP_005394597 MODEL 8882319 protein-coding Celsr2 cadherin EGF LAG seven-pass G-type receptor 2 INVOLVED IN cerebrospinal fluid secretion (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); coronary artery disease (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955435 12671759 12695070 + 102025836 AGCD01033162;GBBH01034256;GBCE01115246;XM_005389103 XP_005389160 MODEL 8708859 protein-coding Emid1 EMI domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); Golgi apparatus (ortholog) NW_004955455 3514350 3564584 + 102027713 AGCD01045632;AGCD01045633;AGCD01045634;AGCD01045635;AGCD01045636;GBBH01172676;GBDI01170247;XM_005396178;XM_005396179;XM_005396180;XM_005396181;XM_005396182;XM_005396188 XP_005396235;XP_005396236;XP_005396237;XP_005396238;XP_005396239;XP_005396245 MODEL 8992201 protein-coding Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 ENCODES a protein that exhibits 11-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); 7-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); NAD binding (ortholog); INVOLVED IN cortisol metabolic process (ortholog); female pregnancy (ortholog); glucocorticoid metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); apparent mineralocorticoid excess syndrome (ortholog); asthma (ortholog) NW_004955484 9206681 9212356 - 102003139 AGCD01058412;GBCQ01007229;GBDJ01009024;XM_005403649 XP_005403706 MODEL 9048593 protein-coding Cfap92 cilia and flagella associated protein 92 (putative) ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955450 10532347 10593351 + 102013781 AGCD01042625;AGCD01042626;AGCD01042627;GBDJ01020449;XM_013518909;XM_013518910;XM_013518911;XM_013518912;XM_013518913;XM_013518914;XM_013518915 XP_013374363;XP_013374364;XP_013374365;XP_013374366;XP_013374367;XP_013374368;XP_013374369 MODEL 8760666 protein-coding Gcn1 GCN1 activator of EIF2AK4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein serine/threonine kinase activator activity (ortholog); stalled ribosome sensor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); protein-RNA covalent cross-linking repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955455 11416222 11474791 + 102019773 AGCD01046004;AGCD01046005;AGCD01046006;GBDF01085355;XM_013520334 XP_013375788 MODEL 9022604 protein-coding Dhrs11 dehydrogenase/reductase 11 ENCODES a protein that exhibits 17-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN steroid biosynthetic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog) NW_004955451 1335134 1343271 - 102029349 AGCD01042966;GBCE01152721;GBCQ01009204;XM_005393942 XP_005393999 MODEL 8842099 protein-coding LOC102003757 olfactory receptor 11L1-like NW_004955473 3769632 3770567 + 102003757 AGCD01053938;XM_005401224 XP_005401281 MODEL 8932474 protein-coding Il20rb interleukin 20 receptor subunit beta ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-20 binding (ortholog); INVOLVED IN homeostasis of number of cells within a tissue (ortholog); immune response-inhibiting signal transduction (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); toxic shock syndrome (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); signaling receptor complex (ortholog) NW_004955501 1826687 1863261 - 102016401 AGCD01064063;AGCD01064064;GBCC01037652;XM_013505811;XR_001231528 XP_013361265 MODEL 8798634 protein-coding Carmil3 capping protein regulator and myosin 1 linker 3 INVOLVED IN regulation of postsynapse assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955409 36324141 36341648 - 102015295 AGCD01010456;GBDJ01237974;XM_005377058;XM_013510413;XM_013510414;XM_013510415;XM_013510416;XM_013510417;XM_013510418;XM_013510419;XM_013510420;XM_013510421;XM_013510422;XM_013510423 XP_005377115;XP_013365867;XP_013365868;XP_013365869;XP_013365870;XP_013365871;XP_013365872;XP_013365873;XP_013365874;XP_013365875;XP_013365876;XP_013365877 MODEL 8987028 protein-coding Ankmy1 ankyrin repeat and MYND domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955542 910258 943546 + 102016310 AGCD01071485;GBCE01072530;XM_005411157;XM_005411158;XM_005411159;XM_005411160;XM_005411161;XM_005411162;XM_005411163;XM_005411164;XM_005411165 XP_005411214;XP_005411215;XP_005411216;XP_005411217;XP_005411218;XP_005411219;XP_005411220;XP_005411221;XP_005411222 MODEL 8985997 protein-coding Adrb2 adrenoceptor beta 2 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); amyloid-beta binding (ortholog); B2 bradykinin receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); PARTICIPATES IN adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH acute kidney failure (ortholog); AIDS Dementia Complex (ortholog); Angina Pectoris (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); caveola (ortholog) NW_004955415 5515157 5517198 - 102003962 AGCD01015995;GBBH01126394;XM_005380632 XP_005380689 MODEL 39133725 misc_rna 7SK 7SK RNA 9031418 protein-coding Egr2 early growth response 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aorta development (ortholog); brain segmentation (ortholog); facial nerve structural organization (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); brachydactyly (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955425 16055748 16068429 - 102023171 AGCD01025594;GBDK01360900;XM_005385956;XM_013514884;XM_013514885 XP_005386013;XP_013370338;XP_013370339 MODEL 9018905 protein-coding Brox BRO1 domain and CAAX motif containing INVOLVED IN mitotic nuclear membrane reassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955520 1797657 1819359 - 102017050 AGCD01068062;GBCQ01127688;XM_005409252;XM_005409253;XM_013507023;XM_013507025;XM_013507026 XP_005409309;XP_005409310;XP_013362477;XP_013362479;XP_013362480 MODEL 8709801 protein-coding LOC102008469 protein FAM209B NW_004955445 2725178 2727984 - 102008469 AGCD01039364;GBDJ01263846;XM_005392264 XP_005392321 MODEL 9025720 protein-coding LOC102009577 keratin-associated protein 20-2-like NW_004955407 30220342 30220545 + 102009577 AGCD01007628;XM_005375648 XP_005375705 MODEL 9009511 ncrna LOC102008109 uncharacterized LOC102008109 NW_004955419 15542763 15563815 - 102008109 AGCD01020083;GBDF01286433;XR_260633 MODEL 8725521 protein-coding Cog2 component of oligomeric golgi complex 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN Golgi organization (ortholog); intra-Golgi vesicle-mediated transport (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN COG complex (ortholog); Golgi stack (ortholog) NW_004955492 7879071 7922195 - 102012767 AGCD01060805;GBCB01056195;XM_005404991 XP_005405048 MODEL 39132021 rrna 5S_rRNA 5S ribosomal RNA 9032684 protein-coding Ccdc180 coiled-coil domain containing 180 ASSOCIATED WITH pneumoconiosis (ortholog) NW_004955419 28002063 28066145 - 102026427 AGCD01020453;GBBH01143208;XM_005382852;XM_005382853;XM_013513250;XM_013513251 XP_005382909;XP_005382910;XP_013368704;XP_013368705 MODEL 9067841 protein-coding Ciapin1 cytokine induced apoptosis inhibitor 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); iron ion binding (ortholog); INVOLVED IN hemopoiesis (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955433 15065031 15081392 - 102027104 AGCD01031745;GBBH01165720;XM_005388390;XM_005388391;XM_013516203;XM_013516204;XM_013516205 XP_005388447;XP_005388448;XP_013371657;XP_013371658;XP_013371659 MODEL 8834159 protein-coding Liat1 ligand of ATE1 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN membraneless organelle assembly (ortholog); protein arginylation (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) NW_004955481 2079002 2083141 + 102025004 AGCD01056863;GBBH01065430;XM_005402635;XM_005402636 XP_005402692;XP_005402693 MODEL 9017104 protein-coding LOC102006965 UDP-glucuronosyltransferase 2A3-like NW_004955447 3496754 3533598 + 102006965 AGCD01040619;AGCD01040620;AGCD01040621;AGCD01040622;AGCD01040623;AGCD01040624;XM_005392817;XM_013518564 XP_005392874;XP_013374018 MODEL 8809659 pseudo LOC102004480 vacuole membrane protein 1 pseudogene NW_004955481 686239 728766 + 102004480 AGCD01056799;AGCD01056800;AGCD01056801;AGCD01056802;AGCD01056803 MODEL 8752614 protein-coding Clmp CXADR like cell adhesion molecule INVOLVED IN actin filament polymerization (ortholog); adherens junction assembly (ortholog); adipose tissue development (ortholog); ASSOCIATED WITH genetic disease (ortholog); intestinal pseudo-obstruction (ortholog); lung cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasmic microtubule (ortholog); postsynaptic membrane (ortholog) NW_004955412 23876003 23984603 - 102020098 AGCD01013100;AGCD01013101;AGCD01013102;AGCD01013103;AGCD01013104;GBBH01214681;GBDJ01129599;XM_005378375 XP_005378432 MODEL 39131827 rrna 5S_rRNA 5S ribosomal RNA 8953515 protein-coding LOC102008473 zinc finger protein OZF-like NW_004955569 1649162 1664829 + 102008473 AGCD01074673;AGCD01074674;GBDJ01263726;XM_013509377 XP_013364831 MODEL 39134319 misc_rna 7SK 7SK RNA 8752160 protein-coding LOC102004099 olfactory receptor 8K5-like NW_004955511 1397789 1398727 + 102004099 AGCD01066366;XM_005407960 XP_005408017 MODEL 8963997 protein-coding Gprc6a G protein-coupled receptor class C group 6 member A ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH disorder of sexual development (ortholog); ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955436 137809 159481 - 102006948 AGCD01033535;XM_005389118 XP_005389175 MODEL 8903285 protein-coding Atp5mc1 ATP synthase membrane subunit c locus 1 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); proton channel activity (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); cold acclimation (ortholog); negative regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cation channel complex (ortholog); distal axon (ortholog); mitochondrion (ortholog) NW_004955451 12426309 12429460 - 102029813 AGCD01043393;AGCD01043394;GBCE01002341;XM_005394227;XM_005394228 XP_005394284;XP_005394285 MODEL 8758232 protein-coding Acyp1 acylphosphatase 1 PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955523 499508 507809 + 102013963 AGCD01068460;GBDJ01387062;XM_005409377 XP_005409434 MODEL 9013918 protein-coding Itpka inositol-trisphosphate 3-kinase A ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to calcium ion (ortholog); dendritic spine maintenance (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH high grade glioma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955416 8300059 8310225 + 102005803 AGCD01017040;AGCD01017041;GBBH01166128;GBDJ01198675;XM_013512602 XP_013368056 MODEL 8910506 gene LOC102012734 Ig lambda-2 chain V region-like NW_004955455 6800743 6801214 + 102012734 AGCD01045813 MODEL 8922323 protein-coding Dhrs13 dehydrogenase/reductase 13 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955481 4270948 4276774 + 102019500 AGCD01056933;GBDF01146621;XM_005402708 XP_005402765 MODEL 8777166 protein-coding Cabp4 calcium binding protein 4 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN photoreceptor cell morphogenesis (ortholog); phototransduction (ortholog); retinal bipolar neuron differentiation (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 1 (ortholog); color blindness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); presynapse (ortholog) NW_004955422 18023639 18028845 - 102018613 AGCD01022935;GBBH01046929;XM_005384330 XP_005384387 MODEL 8707038 protein-coding Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955458 14199912 14201712 + 102027496 AGCD01047829;GBDF01187898;GBDJ01087414;XM_013520977 XP_013376431 MODEL 9065593 pseudo LOC102006580 olfactory receptor 13C4-like NW_004955419 21896616 21897652 + 102006580 AGCD01020289 MODEL 8865628 protein-coding LOC102011120 filamin-interacting protein FAM101A ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN actin filament bundle organization (ortholog); negative regulation of bone mineralization involved in bone maturation (ortholog); negative regulation of chondrocyte development (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN actin filament bundle (ortholog) NW_004955482 5034075 5044162 - 102011120 AGCD01057318;GBCE01016386;XM_005403010;XM_005403011;XM_013503639 XP_005403067;XP_005403068;XP_013359093 MODEL 8875020 ncrna LOC102021702 uncharacterized LOC102021702 NW_004955531 3528962 3534395 + 102021702 AGCD01070075;GBDF01022393;XR_264714 MODEL 39134032 misc_rna 7SK 7SK RNA 8763602 pseudo LOC102010338 uncharacterized protein C3orf38 homolog pseudogene NW_004955456 8222073 8223194 - 102010338 AGCD01046462 MODEL 9065271 protein-coding Abitram actin binding transcription modulator ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); regulation of actin filament polymerization (ortholog); regulation of filopodium assembly (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN dendrite (ortholog); filopodium tip (ortholog); growth cone (ortholog) NW_004955419 18029763 18034945 - 102021243 AGCD01020168;GBCE01011765;XM_005382759 XP_005382816 MODEL 8759651 protein-coding Ccnt1 cyclin T1 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase activator activity (ortholog); INVOLVED IN host-mediated activation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); lymphoma (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955500 7580625 7606913 - 102006480 AGCD01063933;AGCD01063934;AGCD01063935;GBCQ01150173;XM_005406661;XR_001231467 XP_005406718 MODEL 8875818 protein-coding Cdc42se2 CDC42 small effector 2 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN regulation of signal transduction (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955408 2780126 2881800 + 102020208 AGCD01008034;AGCD01008035;AGCD01008036;AGCD01008037;AGCD01008038;AGCD01008039;GBBH01065425;XM_005376069;XM_005376071 XP_005376126;XP_005376128 MODEL 10186633 ncrna LOC106149924 uncharacterized LOC106149924 NW_004955402 10356702 10388333 + 106149924 AGCD01000264;AGCD01000265;AGCD01000266;AGCD01000267;AGCD01000268;GBBH01124966;XR_001236409 MODEL 8904613 pseudo LOC102011508 small glutamine-rich tetratricopeptide repeat-containing protein beta pseudogene NW_004955458 14795983 14797440 + 102011508 AGCD01047847 MODEL 8830000 protein-coding Fbxo33 F-box protein 33 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955409 21929863 21952812 + 102014649 AGCD01009996;AGCD01009997;AGCD01009998;GBDF01127060;XM_005376882 XP_005376939 MODEL 39133899 misc_rna 7SK 7SK RNA 9003830 protein-coding LOC102009579 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase NW_004955456 8783121 8961174 + 102009579 AGCD01046502;AGCD01046503;AGCD01046504;GBDF01082105;XM_005396723;XM_013520568;XM_013520569;XM_013520570;XM_013520571 XP_005396780;XP_013376022;XP_013376023;XP_013376024;XP_013376025 MODEL 8981091 protein-coding Emilin1 elastin microfibril interfacer 1 ENCODES a protein that exhibits extracellular matrix constituent conferring elasticity (ortholog); identical protein binding (ortholog); integrin binding involved in cell-matrix adhesion (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cell adhesion mediated by integrin (ortholog); cell migration (ortholog); ASSOCIATED WITH arterial tortuosity syndrome (ortholog); ARTERIAL TORTUOSITY-BONE FRAGILITY SYNDROME (ortholog); autosomal dominant distal hereditary motor neuronopathy 10 (ortholog); FOUND IN EMILIN complex (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955469 9049666 9057692 + 102019051 AGCD01052488;GBCE01031448;XM_005400450 XP_005400507 MODEL 9005725 protein-coding Hsd17b1 hydroxysteroid 17-beta dehydrogenase 1 ENCODES a protein that exhibits 17-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); estradiol binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); cellular response to metal ion (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); endometriosis (ortholog); FOUND IN cytosol (ortholog) NW_004955451 16449333 16452036 + 102019459 AGCD01043677;AGCD01043678;GBCQ01028037;XM_005394464 XP_005394521 MODEL 8778106 protein-coding Celsr3 cadherin EGF LAG seven-pass G-type receptor 3 INVOLVED IN axonal fasciculation (ortholog); cilium assembly (ortholog); dopaminergic neuron axon guidance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog); presynaptic active zone membrane (ortholog) NW_004955532 724306 749192 - 102028795 AGCD01070149;GBDI01021516;XM_005410158;XM_005410159;XM_005410161;XR_001232023 XP_005410215;XP_005410216;XP_005410218 MODEL 8908110 protein-coding Gcna germ cell nuclear acidic peptidase ENCODES a protein that exhibits SUMO polymer binding (ortholog); INVOLVED IN protein-DNA covalent cross-linking repair (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PML body (ortholog) NW_004955475 11111151 11145474 + 102029073 AGCD01055142;AGCD01055143;GBDF01007488;XM_005401708 XP_005401765 MODEL 8730603 ncrna LOC102003758 uncharacterized LOC102003758 NW_004955415 5445231 5497596 + 102003758 AGCD01015995;GBDK01101825;XR_260270 MODEL 8750824 protein-coding Trim46 tripartite motif containing 46 INVOLVED IN anterograde synaptic vesicle transport (ortholog); axonogenesis (ortholog); microtubule bundle formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon initial segment (ortholog); main axon (ortholog); proximal neuron projection (ortholog) NW_004955545 1646244 1656825 + 102028020 AGCD01071864;GBDF01295696;XM_005411579;XM_005411581;XM_005411582;XM_005411583;XM_005411584 XP_005411636;XP_005411638;XP_005411639;XP_005411640;XP_005411641 MODEL 8986303 protein-coding Il21 interleukin 21 ENCODES a protein that exhibits cytokine receptor binding (ortholog); interleukin-2 receptor binding (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); allergic disease (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955428 18057096 18065492 + 102014809 AGCD01028056;XM_005386769 XP_005386826 MODEL 8852351 protein-coding LOC102005530 arylacetamide deacetylase-like NW_004955448 2938773 2958946 + 102005530 AGCD01041296;AGCD01041297;AGCD01041298;AGCD01041299;GBCQ01129513;XM_005393035 XP_005393092 MODEL 8868064 protein-coding Alb albumin ENCODES a protein that exhibits DNA binding (ortholog); enterobactin binding (ortholog); enzyme binding (ortholog); INVOLVED IN bilirubin transport (ortholog); cellular response to calcium ion starvation (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; organophosphate response pathway; ASSOCIATED WITH suppurative otitis media; Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); FOUND IN extracellular region; basement membrane (ortholog); cytoplasm (ortholog) NW_004955447 9327 21212 - 102017521 AGCD01040426;AGCD01040427;AGCD01040428;AGCD01040429;AGCD01040430;GBCB01023892;GBDI01069567;XM_005392761 XP_005392818 MODEL 8814556 protein-coding Carns1 carnosine synthase 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); carnosine synthase activity (ortholog); homocarnosine synthase activity (ortholog); INVOLVED IN carnosine biosynthetic process (ortholog); response to peptide (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955422 18051721 18061500 - 102019281 AGCD01022936;GBDI01254744;XM_005384332;XM_005384333;XM_005384334;XM_013513938 XP_005384389;XP_005384390;XP_005384391;XP_013369392 MODEL 9049982 protein-coding Ankmy2 ankyrin repeat and MYND domain containing 2 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955410 19778736 19812731 - 102021321 AGCD01011030;GBCC01042899;GBDK01280338;XM_013510568 XP_013366022 MODEL 8826709 protein-coding Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); ERCC4-ERCC1 complex (ortholog) NW_004955442 4833453 4861201 - 102018773 AGCD01037543;AGCD01037544;AGCD01037545;GBDI01017324;XM_005391144;XM_013517964 XP_005391201;XP_013373418 MODEL 8832337 protein-coding Kcnh4 potassium voltage-gated channel subfamily H member 4 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955451 16217021 16233789 - 102013787 AGCD01043660;AGCD01043661;GBBH01113252;XM_013519388;XM_013519389;XM_013519390;XM_013519391 XP_013374842;XP_013374843;XP_013374844;XP_013374845 MODEL 9057121 protein-coding Adrb3 adrenoceptor beta 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); beta-adrenergic receptor activity (ortholog); beta3-adrenergic receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH Alzheimer's disease (ortholog); colitis (ortholog); congestive heart failure (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955463 13663064 13665553 - 102015487 AGCD01049880;GBDJ01253959;XM_005398422 XP_005398479 MODEL 39133726 misc_rna 7SK 7SK RNA 8825814 protein-coding Egr3 early growth response 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); ASSOCIATED WITH Ataxia (ortholog); COVID-19 (ortholog); thymoma (ortholog) NW_004955403 46105447 46108149 - 102014312 AGCD01002849;GBDF01192293;XM_005373688 XP_005373745 MODEL 9015695 protein-coding Apela apelin receptor early endogenous ligand ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); embryonic heart tube development (ortholog); ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN extracellular region (ortholog) NW_004955403 40257467 40266275 - 102013238 AGCD01002676;AGCD01002677;GBDI01055775;XM_013515250 XP_013370704 MODEL 39131828 rrna 5S_rRNA 5S ribosomal RNA 8885347 ncrna LOC102005533 uncharacterized LOC102005533 NW_004955402 4830997 4925604 + 102005533 AGCD01000128;AGCD01000129;GBDF01177440;XR_001235012;XR_259028 MODEL 8840889 protein-coding Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); glycolipid binding (ortholog); sulfatide binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); action potential (ortholog); amino acid transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN autolysosome (ortholog); autophagosome (ortholog); caveola (ortholog) NW_004955493 6696520 6707849 - 102017676 AGCD01061130;AGCD01061131;GBDI01112983;XM_005405173 XP_005405230 MODEL 8831303 pseudo LOC102009222 C-Myc-binding protein pseudogene NW_004955440 3127945 3130866 - 102009222 AGCD01036236 MODEL 8831055 protein-coding Ifi35 interferon induced protein 35 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN macrophage activation involved in immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955451 16790998 16798993 + 102029254 AGCD01043707;GBBH01032363;XM_005394494 XP_005394551 MODEL 8826532 protein-coding LOC102008111 UPF0547 protein C16orf87 NW_004955420 26793782 26794800 + 102008111 AGCD01021432;XM_005383473 XP_005383530 MODEL 39132022 rrna 5S_rRNA 5S ribosomal RNA 9039717 protein-coding Ccdc181 coiled-coil domain containing 181 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN manchette assembly (ortholog); sperm flagellum assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); manchette (ortholog) NW_004955462 7820176 7838931 + 102013700 AGCD01049309;GBDF01010334;XM_005398195;XM_005398198;XM_005398199;XM_005398200;XM_013521404;XM_013521406 XP_005398252;XP_005398255;XP_005398256;XP_005398257;XP_013376858;XP_013376860 MODEL 8947028 protein-coding Gprin1 G protein regulated inducer of neurite outgrowth 1 ENCODES a protein that exhibits phosphoprotein binding (ortholog); INVOLVED IN neuron projection development (ortholog); FOUND IN plasma membrane (ortholog) NW_004955408 28871379 28884961 - 102014645 AGCD01008733;GBDF01067460;XM_005376391;XM_005376392;XM_005376393 XP_005376448;XP_005376449;XP_005376450 MODEL 9025652 pseudo LOC102006967 transmembrane and TPR repeat-containing protein 3 pseudogene NW_004955582 159962 162499 - 102006967 AGCD01075747 MODEL 9011229 protein-coding Lif LIF interleukin 6 family cytokine ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); leukemia inhibitory factor receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte differentiation (ortholog); blood vessel remodeling (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Cardiomegaly (ortholog); colon cancer (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog) NW_004955455 4489515 4505439 - 102016978 AGCD01045676;AGCD01045677;GBBH01132054;XM_005396245;XM_005396246;XM_005396248;XM_013520369 XP_005396302;XP_005396303;XP_005396305;XP_013375823 MODEL 8848716 protein-coding LOC102006582 serine protease 44-like NW_004955420 25378681 25382275 + 102006582 AGCD01021355;GBDF01077365;XM_013513624 XP_013369078 MODEL 39134033 misc_rna 7SK 7SK RNA 8956721 pseudo LOC102017625 uncharacterized protein C11orf57 pseudogene NW_004955405 9393595 9394462 - 102017625 AGCD01004772 MODEL 8961125 protein-coding Brpf1 bromodomain and PHD finger containing 1 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); common myeloid progenitor cell proliferation (ortholog); neural tube formation (ortholog); ASSOCIATED WITH ankyloglossia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); histone acetyltransferase complex (ortholog) NW_004955561 1260237 1275953 + 102006294 AGCD01073845;GBDF01089085;XM_005413023;XM_005413024;XM_005413025;XM_005413026;XM_005413027;XM_005413028;XM_013509081 XP_005413080;XP_005413081;XP_005413082;XP_005413083;XP_005413084;XP_005413085;XP_013364535 MODEL 153211024 protein-coding ADRB3 adrenoceptor beta 3 8984806 protein-coding Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ENCODES a protein that exhibits actin filament binding (ortholog); ATP binding (ortholog); bubble DNA binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); activated T cell proliferation (ortholog); PARTICIPATES IN p53 signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell leading edge (ortholog); cytoplasm (ortholog) NW_004955513 652048 799182 + 102017368 AGCD01066829;AGCD01066830;AGCD01066831;AGCD01066832;GBDF01082882;XM_005408347;XM_005408348 XP_005408404;XP_005408405 MODEL 39133900 misc_rna 7SK 7SK RNA 39134334 misc_rna 7SK 7SK RNA 8856663 protein-coding LOC102004101 olfactory receptor 5D18-like NW_004955511 575528 576477 - 102004101 AGCD01066333;XM_013506420 XP_013361874 MODEL 8789208 pseudo LOC102009581 rRNA-processing protein UTP23 homolog pseudogene NW_004955458 15500020 15501069 + 102009581 AGCD01047897 MODEL 8881327 protein-coding Cog3 component of oligomeric golgi complex 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); glycoprotein biosynthetic process (ortholog); Golgi organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN COG complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955518 3211729 3276057 + 102015437 AGCD01067795;AGCD01067796;AGCD01067797;GBBH01053541;XM_005409086;XM_005409087 XP_005409143;XP_005409144 MODEL 8767813 protein-coding Emilin2 elastin microfibril interfacer 2 INVOLVED IN negative regulation of cell migration (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN EMILIN complex (ortholog); extracellular region (ortholog) NW_004955402 7507674 7519978 - 102016008 AGCD01000175;AGCD01000176;GBDF01025495;GBDI01175041;XM_013518815 XP_013374269 MODEL 8730281 protein-coding Ciart circadian associated repressor of transcription ENCODES a protein that exhibits E-box binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); locomotor rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) NW_004955413 490117 494332 - 102017111 AGCD01013472;GBDF01020471;XM_005378693;XM_013511464;XM_013511465;XM_013511466 XP_005378750;XP_013366918;XP_013366919;XP_013366920 MODEL 8999585 protein-coding Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 ENCODES a protein that exhibits (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); 17-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); bile acid biosynthetic process (ortholog); brexanolone metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); azoospermia (ortholog); Cafe-au-Lait Spots (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); endoribonuclease complex (ortholog) NW_004955475 478690 481029 - 102015007 AGCD01054692;GBCQ01166613;XM_005401494 XP_005401551 MODEL 9063822 protein-coding Itpkb inositol-trisphosphate 3-kinase B ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular response to calcium ion (ortholog); common myeloid progenitor cell proliferation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955489 726641 814180 - 102013422 AGCD01059812;AGCD01059813;GBCB01087148;XM_005404501 XP_005404558 MODEL 8856656 ncrna LOC102003760 uncharacterized LOC102003760 NW_004955475 4403226 4412590 - 102003760 AGCD01054876;AGCD01054877;GBDK01406757;XR_001230760;XR_001230761;XR_263610 MODEL 8753860 protein-coding Acyp2 acylphosphatase 2 ENCODES a protein that exhibits acylphosphatase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH chronic recurrent multifocal osteomyelitis (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955415 32510613 32511105 + 102003441 AGCD01016723;GBDF01193184;XM_005381058 XP_005381115 MODEL 8883243 protein-coding Cemip cell migration inducing hyaluronidase 1 ENCODES a protein that exhibits clathrin heavy chain binding (ortholog); ER lumen protein retrieval receptor activity (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN hyaluronan catabolic process (ortholog); hyaluronan metabolic process (ortholog); positive regulation of cell migration (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); clathrin-coated vesicle membrane (ortholog); cytoplasm (ortholog) NW_004955416 11562047 11699925 + 102020800 AGCD01017190;GBCQ01044075;XM_005381436;XM_013512631;XM_013512632;XM_013512633 XP_005381493;XP_013368085;XP_013368086;XP_013368087 MODEL 8895236 ncrna LOC102004481 uncharacterized LOC102004481 NW_004955482 1525707 1528873 - 102004481 AGCD01057219;AGCD01057220;GBDI01053452;XR_001230959;XR_263819 MODEL 8727921 protein-coding Dhrs3 dehydrogenase/reductase 3 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cardiac septum morphogenesis (ortholog); negative regulation of retinoic acid receptor signaling pathway (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH craniosynostosis (ortholog); craniosynostosis-scoliosis syndrome (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955486 1439179 1473476 + 102024235 AGCD01058955;AGCD01058956;GBCE01028543;XM_005403948 XP_005404005 MODEL 8924180 protein-coding Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear speck (ortholog) NW_004955406 42190043 42199323 + 102020880 AGCD01006697;GBDF01047346;XM_005375399;XM_005375400;XM_005375402;XM_013502732 XP_005375456;XP_005375457;XP_005375459;XP_013358186 MODEL 8900542 protein-coding Gcnt1 glucosaminyl (N-acetyl) transferase 1 ENCODES a protein that exhibits beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN cell adhesion molecule production (ortholog); glycoprotein biosynthetic process (ortholog); kidney morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN extracellular region (ortholog); Golgi cisterna (ortholog); Golgi membrane (ortholog) NW_004955512 2827321 2857777 - 102028781 AGCD01066690;GBBH01117760;XM_005408306;XM_005408307 XP_005408363;XP_005408364 MODEL 8792442 protein-coding LOC102011124 olfactory receptor 2K2 NW_004955419 15925491 15926438 + 102011124 AGCD01020094;XM_013513143 XP_013368597 MODEL 8751346 protein-coding Cib1 calcium and integrin binding 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); Epidermodysplasia Verruciformis 3 (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); centrosome (ortholog) NW_004955416 15102632 15106372 + 102022284 AGCD01017300;AGCD01017301;GBDI01005717;XM_005381532 XP_005381589 MODEL 8886346 ncrna LOC102008474 uncharacterized LOC102008474 NW_004955446 117396 131699 - 102008474 AGCD01039928;AGCD01039929;XR_262359 MODEL 8705816 protein-coding Kcnh5 potassium voltage-gated channel subfamily H member 5 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); developmental and epileptic encephalopathy (ortholog); Developmental and Epileptic Encephalopathy 112 (ortholog); FOUND IN cell surface (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955466 6704431 7042727 + 102010463 AGCD01050932;AGCD01050933;AGCD01050934;AGCD01050935;AGCD01050936;AGCD01050937;AGCD01050938;AGCD01050939;AGCD01050940;AGCD01050941;GBCQ01085123;XM_005399159 XP_005399216 MODEL 39131830 rrna 5S_rRNA 5S ribosomal RNA 8758766 protein-coding LOC102005537 protein S100-A15A NW_004955592 62455 67295 + 102005537 AGCD01076300;XM_005414601 XP_005414658 MODEL 8827587 protein-coding Atp5mc2 ATP synthase membrane subunit c locus 2 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); INVOLVED IN pore complex assembly (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); response to ethanol (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cation channel complex (ortholog); mitochondrion (ortholog) NW_004955458 952817 960963 - 102024430 AGCD01047160;GBDJ01017247;XM_005397191;XM_005397192 XP_005397248;XP_005397249 MODEL 8812013 protein-coding Fbxo34 F-box protein 34 ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955466 13981664 13984804 - 102011854 AGCD01051197;GBCQ01155104;XM_013522008 XP_013377462 MODEL 8822605 pseudo LOC102012739 olfactory receptor 6C74-like NW_004955458 2426969 2427904 - 102012739 AGCD01047233 MODEL 8982880 protein-coding Il21r interleukin 21 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); atopic dermatitis (ortholog); B-cell lymphoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955493 5613704 5646692 + 102007025 AGCD01061071;AGCD01061072;GBDI01219894;GBDI01219902;XM_013504819 XP_013360273 MODEL 8841640 protein-coding LOC102021703 IQ domain-containing protein F1 ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN positive regulation of acrosome reaction (ortholog); positive regulation of flagellated sperm motility involved in capacitation (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955532 3559990 3561238 - 102021703 AGCD01070287;GBDF01010023;XM_005410328 XP_005410385 MODEL 8707198 protein-coding Alcam activated leukocyte cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axon guidance (ortholog); heterophilic cell-cell adhesion (ortholog); motor neuron axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); FOUND IN axon (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955427 6494657 6544668 + 102009083 AGCD01027030;GBBH01035028;GBCC01001133;XM_005386343 XP_005386400 MODEL 9065783 protein-coding Ercc5 ERCC excision repair 5, endonuclease ENCODES a protein that exhibits bubble DNA binding (ortholog); damaged DNA binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN base-excision repair, AP site formation (ortholog); determination of adult lifespan (ortholog); DNA repair (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cerebrooculofacioskeletal syndrome 3 (ortholog); Cockayne syndrome (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromosome (ortholog); DNA replication factor A complex (ortholog); nucleoplasm (ortholog) NW_004955404 8294506 8321505 - 102028608 AGCD01003350;GBDK01132700;XM_005374021 XP_005374078 MODEL 8916547 protein-coding Ankra2 ankyrin repeat family A member 2 ENCODES a protein that exhibits histone deacetylase binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN 3M complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955425 27035850 27045253 + 102005820 AGCD01025959;GBDJ01017286;XM_005386069;XM_005386070 XP_005386126;XP_005386127 MODEL 8787674 protein-coding LOC102006584 kita-kyushu lung cancer antigen 1 homolog NW_004955490 5015885 5017132 - 102006584 AGCD01060199;GBDF01123449;XM_005404649 XP_005404706 MODEL 8922489 protein-coding Ccnt2 cyclin T2 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); chromatin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN early viral transcription (ortholog); late viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955440 2424976 2468388 + 102004860 AGCD01036207;GBDF01221338;XM_005390750;XM_005390752;XM_005390754;XM_005390755;XM_013517468;XM_013517469;XR_262000 XP_005390807;XP_005390809;XP_005390811;XP_005390812;XP_013372922;XP_013372923 MODEL 8950397 protein-coding Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); chromatin DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cell redox homeostasis (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) NW_004955550 1273170 1275843 + 102025292 AGCD01072559;GBDF01088118;XM_005412062;XM_013508571 XP_005412119;XP_013364025 MODEL 8822051 protein-coding Egr4 early growth response 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); middle cerebral artery infarction (ortholog) NW_004955424 12339152 12341925 + 102015739 AGCD01024604;GBDF01288078;XM_005385561 XP_005385618 MODEL 8999698 protein-coding Cln5 CLN5 lysosomal BMP synthase ENCODES a protein that exhibits bis(monoacylglycero)phosphate synthase activity (ortholog); D-mannose binding (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN brain development (ortholog); lysosomal lumen acidification (ortholog); lysosome organization (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); Dysarthria (ortholog); fundus dystrophy (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); lysosomal membrane (ortholog) NW_004955404 30229632 30235677 - 102019132 AGCD01004001;GBDF01146019;GBDK01284770;XM_005374163 XP_005374220 MODEL 8876262 pseudo LOC102005539 integrin beta-1-like NW_004955602 28357 31946 + 102005539 AGCD01076761 MODEL 9044240 protein-coding LOC102004103 EF-hand calcium-binding domain-containing protein 1-like NW_004955432 9467793 9483554 - 102004103 AGCD01030906;GBDK01028185;XM_005388019;XM_013515941 XP_005388076;XP_013371395 MODEL 8787773 ncrna LOC102010339 uncharacterized LOC102010339 NW_004955408 5326384 5328418 + 102010339 AGCD01008132;GBDF01177225;XR_259661 MODEL 8938883 protein-coding Gprin2 G protein regulated inducer of neurite outgrowth 2 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955510 6141516 6155372 + 102014592 AGCD01066302;AGCD01066303;GBCE01107160;XM_005407914;XM_005407915;XM_005407916;XM_005407917;XM_013506342;XM_013506343;XM_013506344 XP_005407971;XP_005407972;XP_005407973;XP_005407974;XP_013361796;XP_013361797;XP_013361798 MODEL 8824573 protein-coding LOC102006973 translational activator GCN1-like NW_004956042 4662 8692 - 102006973 AGCD01078929;XM_005415165 XP_005415222 MODEL 9049236 protein-coding Cars1 cysteinyl-tRNA synthetase 1 ENCODES a protein that exhibits ATP binding (ortholog); cysteine-tRNA ligase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cysteinyl-tRNA aminoacylation (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955422 14685356 14738420 - 102013620 AGCD01022863;AGCD01022864;GBCQ01150434;XM_005384221;XM_005384222;XM_013514108;XM_013514109 XP_005384278;XP_005384279;XP_013369562;XP_013369563 MODEL 8704965 protein-coding Cfap95 cilia and flagella associated protein 95 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) NW_004955434 3193250 3267992 - 102030467 AGCD01032129;AGCD01032130;GBDI01245825;XM_005388557;XR_001234830;XR_001234831 XP_005388614 MODEL 8839041 protein-coding Hsd17b11 hydroxysteroid 17-beta dehydrogenase 11 ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); steroid dehydrogenase activity (ortholog); INVOLVED IN androgen catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog) NW_004955474 2477670 2510424 + 102016050 AGCD01054297;GBCE01052669;GBDK01006521;XM_005401337 XP_005401394 MODEL 9026129 protein-coding LOC102009223 cytochrome P450 1B1 ENCODES a protein that exhibits estrogen 16-alpha-hydroxylase activity (ortholog); estrogen 2-hydroxylase activity (ortholog); heme binding (ortholog); INVOLVED IN adrenal gland development (ortholog); angiogenesis (ortholog); arachidonate metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); adenoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) NW_004955441 5803397 5812131 - 102009223 AGCD01036887;GBDF01179111;XM_005390882;XM_013517545 XP_005390939;XP_013372999 MODEL 39133744 misc_rna 7SK 7SK RNA 9051705 protein-coding Dyrk4 dual specificity tyrosine phosphorylation regulated kinase 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955413 2359480 2410395 + 102003640 AGCD01013544;AGCD01013545;XM_005378732;XM_005378733;XM_013511555;XM_013511556;XM_013511557;XM_013511558;XM_013511559;XM_013511560;XM_013511561;XM_013511562;XM_013511563;XM_013511565;XM_013511566;XM_013511567 XP_005378789;XP_005378790;XP_013367009;XP_013367010;XP_013367011;XP_013367012;XP_013367013;XP_013367014;XP_013367015;XP_013367016;XP_013367017;XP_013367019;XP_013367020;XP_013367021 MODEL 8993695 protein-coding Dhrs7b dehydrogenase/reductase 7B ENCODES a protein that exhibits acylglycerone-phosphate reductase (NADP+) activity (ortholog); DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); ether lipid biosynthetic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog); nucleus (ortholog) NW_004955577 1071904 1122204 + 102022241 AGCD01075435;AGCD01075436;GBDF01008512;XM_005413986;XM_005413987;XM_013509623 XP_005414043;XP_005414044;XP_013365077 MODEL 8780711 protein-coding Cib2 calcium and integrin binding family member 2 ENCODES a protein that exhibits calcium ion binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to ATP (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 48 (ortholog); cervical cancer (ortholog); FOUND IN cuticular plate (ortholog); cytoplasm (ortholog); muscle tendon junction (ortholog) NW_004955450 660655 674726 - 102006730 AGCD01042341;GBCE01008843;XM_005393438;XM_013518896;XM_013518897 XP_005393495;XP_013374350;XP_013374351 MODEL 8948285 protein-coding Ifih1 interferon induced with helicase C domain 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 7 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955449 11538869 11596502 + 102016765 AGCD01042091;AGCD01042092;GBDK01395379;XM_005393309 XP_005393366 MODEL 8943932 protein-coding Brpf3 bromodomain and PHD finger containing 3 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of DNA replication (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog); nucleus (ortholog) NW_004955437 3951160 3985133 + 102005966 AGCD01034358;GBCB01061515;GBCE01141854;XM_005389580 XP_005389637 MODEL 9065896 pseudo LOC102008112 amyloid beta A4 precursor protein-binding family B member 2-like NW_004955488 9036407 9057644 + 102008112 AGCD01059741;AGCD01059742;AGCD01059743 MODEL 8734927 pseudo LOC102008477 40S ribosomal protein S24 pseudogene NW_004955447 14840245 14840673 - 102008477 AGCD01041022 MODEL 39134335 misc_rna 7SK 7SK RNA 8725998 ncrna LOC102006589 uncharacterized LOC102006589 NW_004955495 6548347 6552199 + 102006589 AGCD01062085;GBDF01303427;XR_264164 MODEL 8855233 protein-coding Ccdc182 coiled-coil domain containing 182 INVOLVED IN female gonad development (ortholog) NW_004955451 5216761 5218204 + 102006854 AGCD01043166;GBDF01002175;XM_005394048 XP_005394105 MODEL 8716160 protein-coding Trim47 tripartite motif containing 47 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); colorectal cancer (ortholog); Experimental Neoplasms (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955506 6379088 6383671 + 102010607 AGCD01065416;GBDK01285018;XM_005407473 XP_005407530 MODEL 8955719 protein-coding Cabp5 calcium binding protein 5 ASSOCIATED WITH lung cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955609 212176 225415 + 102010011 AGCD01077054;GBDJ01292062;XM_005414924;XM_005414925;XM_005414926;XM_005414927 XP_005414981;XP_005414982;XP_005414983;XP_005414984 MODEL 8815533 protein-coding Cog4 component of oligomeric golgi complex 4 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN COG complex (ortholog) NW_004955484 3278624 3307580 - 102029633 AGCD01058169;AGCD01058170;AGCD01058171;AGCD01058172;GBCB01041180;GBDJ01373252;XM_013503867 XP_013359321 MODEL 8840530 protein-coding LOC102003764 collagen alpha-1(III) chain-like NW_004955478 11060155 11061599 - 102003764 AGCD01056157;GBCB01001731;XM_005402303 XP_005402360 MODEL 8734916 protein-coding Itpkc inositol-trisphosphate 3-kinase C ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955578 597105 614081 - 102007483 AGCD01075489;GBDF01305939;XM_005414026 XP_005414083 MODEL 8824899 protein-coding Cdc45 cell division cycle 45 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); androgen insensitivity syndrome (ortholog); Androgen Insensitivity Syndrome due to Coactivator Deficiency (ortholog); FOUND IN ciliary basal body (ortholog); CMG complex (ortholog); cytosol (ortholog) NW_004955442 18513398 18548317 - 102017513 AGCD01038009;AGCD01038010;GBDF01252151;GBDF01252157;XM_013517954 XP_013373408 MODEL 8915575 protein-coding Ada adenosine deaminase ENCODES a protein that exhibits 2'-deoxyadenosine deaminase activity (ortholog); adenosine deaminase activity (ortholog); deaminase activity (ortholog); INVOLVED IN adenosine catabolic process (ortholog); adenosine metabolic process (ortholog); AMP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenosine deaminase deficiency (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytoplasmic vesicle lumen (ortholog) NW_004955445 12696096 12717488 + 102016959 AGCD01039761;GBBH01228991;XM_005392467 XP_005392524 MODEL 8983275 pseudo LOC102021709 60S ribosomal protein L6-like NW_004955439 8223203 8224183 + 102021709 AGCD01035783 MODEL 8861526 ncrna LOC102011516 uncharacterized LOC102011516 NW_004955411 10562211 10565308 + 102011516 AGCD01011781;GBDF01307096;XR_259930 MODEL 8708630 ncrna LOC102017628 uncharacterized LOC102017628 NW_004955454 3267669 3273574 - 102017628 AGCD01045061;GBDF01144321;XR_262778 MODEL 39134034 misc_rna 7SK 7SK RNA 10328650 ncrna LOC106149925 uncharacterized LOC106149925 NW_004955457 13630497 13639479 + 106149925 AGCD01047049;XR_001236406;XR_001236407 MODEL 8974897 protein-coding Lifr LIF receptor subunit alpha ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); ciliary neurotrophic factor receptor binding (ortholog); coreceptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); bone development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN ciliary neurotrophic factor receptor complex (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955426 23045867 23093694 - 102019413 AGCD01026633;AGCD01026634;GBCQ01002072;XM_013514985;XM_013514986 XP_013370439;XP_013370440 MODEL 39132024 rrna 5S_rRNA 5S ribosomal RNA 8921205 protein-coding Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); actin filament organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955406 18435984 18527967 - 102028934 AGCD01006035;AGCD01006036;AGCD01006037;AGCD01006038;AGCD01006039;AGCD01006040;AGCD01006041;AGCD01006042;GBDI01026839;XM_005374945;XM_005374946;XM_005374949;XM_005374950 XP_005375002;XP_005375003;XP_005375006;XP_005375007 MODEL 39131831 rrna 5S_rRNA 5S ribosomal RNA 8902123 protein-coding Atp5mc3 ATP synthase membrane subunit c locus 3 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); INVOLVED IN pore complex assembly (ortholog); response to (R)-carnitine (ortholog); response to ethanol (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cation channel complex (ortholog); mitochondrion (ortholog) NW_004955449 310839 314086 + 102029247 AGCD01041762;GBDJ01006372;XM_005393170 XP_005393227 MODEL 9028873 protein-coding LOC102012740 interferon-inducible GTPase 1-like NW_004955408 2198852 2276939 - 102012740 AGCD01007998;AGCD01007999;AGCD01008000;AGCD01008001;AGCD01008002;AGCD01008003;GBDK01009851;XM_005376044;XM_013508115 XP_005376101;XP_013363569 MODEL 8764609 protein-coding Cemip2 cell migration inducing hyaluronidase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); hyalurononglucosaminidase activity (ortholog); INVOLVED IN hyaluronan catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955434 1400949 1477278 + 102021477 AGCD01032067;AGCD01032068;GBCQ01127880;XM_005388525;XM_005388527;XM_013516338;XM_013516339 XP_005388582;XP_005388584;XP_013371792;XP_013371793 MODEL 8876132 protein-coding Il22 interleukin 22 INVOLVED IN response to glucocorticoid (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); asthma (ortholog); autoimmune hepatitis (ortholog); FOUND IN decoy receptor complex (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955458 14747339 14755602 - 102029269 AGCD01047846;GBDF01277454;XM_005397469;XM_013520847;XM_013520848 XP_005397526;XP_013376301;XP_013376302 MODEL 8828143 protein-coding Gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type ENCODES a protein that exhibits acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN intestinal absorption (ortholog); kidney morphogenesis (ortholog); tissue morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955450 15204502 15211747 - 102012263 AGCD01042785;GBDF01013134;XM_005393829;XM_005393830;XM_005393831;XM_013519008 XP_005393886;XP_005393887;XP_005393888;XP_013374462 MODEL 8878359 protein-coding Hsd17b12 hydroxysteroid 17-beta dehydrogenase 12 ENCODES a protein that exhibits collagen binding (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); fibronectin binding (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); estrogen biosynthetic process (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); extracellular matrix (ortholog); fatty acid elongase complex (ortholog) NW_004955422 3721452 3864801 - 102025368 AGCD01022527;AGCD01022528;GBCC01015803;XM_005384084 XP_005384141 MODEL 8963821 protein-coding Adrm1 ADRM1 26S proteasome ubiquitin receptor ENCODES a protein that exhibits endopeptidase activator activity (ortholog); molecular function inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN adipose tissue development (ortholog); follicle-stimulating hormone signaling pathway (ortholog); oogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955528 1753450 1759886 - 102029897 AGCD01069569;GBDF01001670;XM_005410026 XP_005410083 MODEL 8964142 ncrna LOC102009224 uncharacterized LOC102009224 NW_004955441 12505345 12519740 + 102009224 AGCD01037123;GBDF01308251;XR_262074 MODEL 39133745 misc_rna 7SK 7SK RNA 8700662 protein-coding Aldh16a1 aldehyde dehydrogenase 16 family member A1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955559 1376862 1390861 - 102016644 AGCD01073641;AGCD01073642;GBCQ01035042;XM_005412882;XM_013509018 XP_005412939;XP_013364472 MODEL 8920404 protein-coding Ankrd1 ankyrin repeat domain 1 ENCODES a protein that exhibits actin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); I band (ortholog) NW_004955425 2258554 2267699 + 102011460 AGCD01025257;GBDI01025686;XM_005385837;XM_005385838 XP_005385894;XP_005385895 MODEL 39133901 misc_rna 7SK 7SK RNA 8703468 protein-coding Ercc6 ERCC excision repair 6, chromatin remodeling factor ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); age related macular degeneration 5 (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN B-WICH complex (ortholog); chromosome (ortholog); nuclear body (ortholog) NW_004955556 745175 812215 + 102029672 AGCD01073179;GBCE01126926;XM_005412569 XP_005412626 MODEL 9057426 protein-coding Cln6 CLN6 transmembrane ER protein ENCODES a protein that exhibits lysophosphatidic acid binding (ortholog); protein homodimerization activity (ortholog); sulfatide binding (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); ganglioside metabolic process (ortholog); glycosaminoglycan metabolic process (ortholog); ASSOCIATED WITH agenesis of the corpus callosum with peripheral neuropathy (ortholog); Animal Disease Models (ortholog); Atrophy (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955450 7876572 7885305 + 102022144 AGCD01042552;GBCB01026389;GBCQ01040807;XM_013518898;XM_013518899;XM_013518900 XP_013374352;XP_013374353;XP_013374354 MODEL 8713676 protein-coding Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 ENCODES a protein that exhibits double-stranded DNA 3'-5' DNA exonuclease activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); mitochondrial inner membrane (ortholog) NW_004955475 2343992 2359492 + 102024790 AGCD01054801;GBCB01086482;XM_005401531 XP_005401588 MODEL 8965931 pseudo LOC102009587 39S ribosomal protein L30, mitochondrial pseudogene NW_004955464 11215198 11215862 + 102009587 AGCD01050139 MODEL 8964581 ncrna LOC102004107 uncharacterized LOC102004107 NW_004955516 3479563 3512968 + 102004107 AGCD01067493;AGCD01067494;GBCB01099233;XR_264534;XR_264535 MODEL 8886505 protein-coding Ehbp1 EH domain binding protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955424 21151473 21500044 - 102015647 AGCD01024895;AGCD01024896;AGCD01024897;AGCD01024898;GBDF01043859;XM_005385724;XM_005385725;XM_005385727;XM_005385730;XM_013514691;XM_013514692 XP_005385781;XP_005385782;XP_005385784;XP_005385787;XP_013370145;XP_013370146 MODEL 8967392 protein-coding LOC102008482 hornerin NW_004955589 190459 199095 + 102008482 AGCD01076158;AGCD01076159;GBCC01001512;XM_005414528;XM_005414529;XM_005414531;XM_013509953;XM_013509954 XP_005414585;XP_005414586;XP_005414588;XP_013365407;XP_013365408 MODEL 39134336 misc_rna 7SK 7SK RNA 8816385 pseudo LOC102004483 LYR motif-containing protein 2 pseudogene NW_004955483 1814352 1814618 + 102004483 AGCD01057654;XM_005403350 MODEL 8755096 protein-coding Ccdc183 coiled-coil domain containing 183 INVOLVED IN centriole assembly (ortholog); cytoplasm organization (ortholog); manchette assembly (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog) NW_004955513 4897359 4904559 + 102023944 AGCD01066943;GBDF01010089;XM_005408555 XP_005408612 MODEL 8843085 protein-coding LOC102011127 zinc finger protein 852 NW_004955420 26958234 26960564 + 102011127 AGCD01021441;XM_013513349 XP_013368803 MODEL 8716572 pseudo LOC102006974 40S ribosomal protein S10 pseudogene NW_004955404 27148218 27148697 + 102006974 AGCD01003909 MODEL 8846637 protein-coding Cars2 cysteinyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits cysteine-tRNA ligase activity (ortholog); INVOLVED IN cysteinyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955404 2008980 2027672 + 102019882 AGCD01003245;GBDI01083094;GBDJ01088737;XM_013515749 XP_013371203 MODEL 8901081 protein-coding Kcnh6 potassium voltage-gated channel subfamily H member 6 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH glucose metabolism disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955478 8242953 8263369 - 102026002 AGCD01056016;GBBH01106870;XM_005402207;XM_005402210;XM_005402211;XM_013503169 XP_005402264;XP_005402267;XP_005402268;XP_013358623 MODEL 8898913 protein-coding Fbxo36 F-box protein 36 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955453 5051138 5133884 - 102004450 AGCD01044704;AGCD01044705;GBDF01161890;XM_005395432;XM_013519823;XM_013519824;XM_013519825 XP_005395489;XP_013375277;XP_013375278;XP_013375279 MODEL 8985176 protein-coding Ccny cyclin Y ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); positive regulation of autophagy (ortholog); positive regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Crohn's disease (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasmic cyclin-dependent protein kinase holoenzyme complex (ortholog); nucleolus (ortholog) NW_004955462 5937292 6088310 - 102030611 AGCD01049266;AGCD01049267;AGCD01049268;AGCD01049269;AGCD01049270;GBBH01005946;GBDJ01353068;XM_005398158 XP_005398215 MODEL 9020311 protein-coding Dysf dysferlin ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to osmotic stress (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2B (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955424 13756130 13970437 - 102025026 AGCD01024637;AGCD01024638;AGCD01024639;AGCD01024640;GBDJ01131542;XM_005385587;XM_005385588;XM_005385589;XM_005385590;XM_005385591;XM_005385592;XM_005385593;XM_005385594;XM_005385595;XM_005385596;XM_005385597;XM_005385598;XM_005385599;XM_005385600;XM_013514696;XM_013514697 XP_005385644;XP_005385645;XP_005385646;XP_005385647;XP_005385648;XP_005385649;XP_005385650;XP_005385651;XP_005385652;XP_005385653;XP_005385654;XP_005385655;XP_005385656;XP_005385657;XP_013370150;XP_013370151 MODEL 8704237 protein-coding Gprin3 GPRIN family member 3 INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); excitatory chemical synaptic transmission (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog) NW_004955405 253917 265309 - 102005103 AGCD01004555;GBDF01115743;XM_013517274 XP_013372728 MODEL 8772790 protein-coding Cib3 calcium and integrin binding family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955524 1386586 1391419 + 102024608 AGCD01068749;GBDF01059038;XM_005409490 XP_005409547 MODEL 8943228 protein-coding Dhrs7c dehydrogenase/reductase 7C ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN D-glucose import across plasma membrane (ortholog); intracellular calcium ion homeostasis (ortholog); regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (ortholog); FOUND IN longitudinal sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) NW_004955467 7330267 7341897 + 102008610 AGCD01051433;GBDI01135172;XM_005399376 XP_005399433 MODEL 9057989 protein-coding Ifit1 interferon induced protein with tetratricopeptide repeats 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); RNA binding (ortholog); RNA sequestering activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to type I interferon (ortholog); ASSOCIATED WITH endometriosis (ortholog); Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955425 3581705 3588528 - 102016075 AGCD01025294;GBDJ01403433;XM_005385850 XP_005385907 MODEL 8785742 protein-coding Brs3 bombesin receptor subtype 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Hyperphagia (ortholog); FOUND IN neuronal cell body (ortholog) NW_004955489 8627569 8631810 - 102013423 AGCD01060021;XM_005404590 XP_005404647 MODEL 8776131 pseudo LOC102006591 mimitin, mitochondrial pseudogene NW_004955423 25450663 25451169 - 102006591 AGCD01024075 MODEL 8905595 protein-coding LOC102005543 PRAME family member 20-like NW_004955615 219115 226336 + 102005543 AGCD01077251;XM_013510139 XP_013365593 MODEL 8994964 ncrna LOC102010340 uncharacterized LOC102010340 NW_004955457 12942492 12966671 + 102010340 AGCD01047033;GBBH01124502;XR_262946 MODEL 8716014 protein-coding Cabp7 calcium binding protein 7 INVOLVED IN gene expression (ortholog); muscle contraction (ortholog); muscle tissue development (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN trans-Golgi network membrane (ortholog) NW_004955455 3977977 3981646 + 102004561 AGCD01045662;GBDI01161267;XM_005396566 XP_005396623 MODEL 9047114 protein-coding Trim54 tripartite motif containing 54 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN microtubule associated complex (ortholog) NW_004955469 9258946 9277275 + 102026740 AGCD01052498;GBCB01004527;XM_005400479 XP_005400536 MODEL 8814507 protein-coding Cog5 component of oligomeric golgi complex 5 INVOLVED IN Golgi organization (ortholog); inter-Golgi cisterna vesicle-mediated transport (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN COG complex (ortholog); Golgi apparatus (ortholog) NW_004955410 11651587 11920866 - 102018065 AGCD01010830;AGCD01010831;AGCD01010832;AGCD01010833;AGCD01010834;AGCD01010835;AGCD01010836;AGCD01010837;GBCB01023279;GBCQ01125603;XM_013510538 XP_013365992 MODEL 9042866 protein-coding LOC102003769 protein NipSnap homolog 3A-like NW_004955419 21692598 21700920 - 102003769 AGCD01020281;GBCB01039739;GBDK01115357;XM_013513175 XP_013368629 MODEL 8825168 protein-coding Emilin3 elastin microfibril interfacer 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); EMILIN complex (ortholog) NW_004955445 15590996 15599813 + 102028030 AGCD01039848;GBDK01269639;XM_005392503;XM_005392505;XM_013518276 XP_005392560;XP_005392562;XP_013373730 MODEL 8943144 protein-coding Ada2 adenosine deaminase 2 ENCODES a protein that exhibits adenosine deaminase activity (ortholog); adenosine receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adenosine catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ataxia telangiectasia (ortholog); Behcet's disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955454 5341822 5355383 - 102029825 AGCD01045149;AGCD01045150;AGCD01045151;GBCQ01016306;XM_005395969;XM_005395970;XM_013520005;XM_013520006;XR_001236207 XP_005396026;XP_005396027;XP_013375459;XP_013375460 MODEL 8744673 protein-coding Itpr2 inositol 1,4,5-trisphosphate receptor type 2 ENCODES a protein that exhibits calcium ion binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); inositol 1,4,5-trisphosphate-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to cAMP (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Brain Hypoxia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cell cortex (ortholog); cytoplasm (ortholog) NW_004955413 21289673 21719610 - 102006014 AGCD01014249;AGCD01014250;AGCD01014251;AGCD01014252;AGCD01014253;AGCD01014254;AGCD01014255;AGCD01014256;AGCD01014257;AGCD01014258;AGCD01014259;AGCD01014260;AGCD01014261;GBBH01228681;GBDI01225022;XM_013511399 XP_013366853 MODEL 8886449 protein-coding LOC102011519 zinc finger protein with KRAB and SCAN domains 3 NW_004955465 13688307 13696499 + 102011519 AGCD01050618;GBCB01076570;XM_005398966 XP_005399023 MODEL 8786505 pseudo LOC102017630 phosphatidylinositol 5-phosphate 4-kinase type-2 alpha pseudogene NW_004955406 10315071 10316248 - 102017630 AGCD01005855 MODEL 39134035 misc_rna 7SK 7SK RNA 39132025 rrna 5S_rRNA 5S ribosomal RNA 8699652 protein-coding Lig1 DNA ligase 1 ENCODES a protein that exhibits DNA ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA repair (ortholog); DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bloom syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955609 118442 160009 + 102008805 AGCD01077052;GBDF01051840;XM_005414919;XM_005414920;XM_005414923 XP_005414976;XP_005414977;XP_005414980 MODEL 9011252 protein-coding Ablim1 actin binding LIM protein 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN axon guidance (ortholog); cilium assembly (ortholog); lamellipodium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); lamellipodium (ortholog); postsynaptic density (ortholog) NW_004955431 19397136 19684574 - 102017805 AGCD01030448;AGCD01030449;AGCD01030450;AGCD01030451;AGCD01030452;GBCE01077697;XM_005387831;XM_005387832;XM_005387833;XM_005387834;XM_005387836;XM_005387838;XM_013515782;XM_013515783;XM_013515784;XM_013515785;XM_013515786;XM_013515787;XM_013515788;XM_013515789;XM_013515790;XM_013515791 XP_005387888;XP_005387889;XP_005387890;XP_005387891;XP_005387893;XP_005387895;XP_013371236;XP_013371237;XP_013371238;XP_013371239;XP_013371240;XP_013371241;XP_013371242;XP_013371243;XP_013371244;XP_013371245 MODEL 8723385 pseudo LOC102012742 gamma-aminobutyric acid receptor-associated protein pseudogene NW_004955409 17452914 17453267 - 102012742 AGCD01009784 MODEL 8755619 protein-coding Cln8 CLN8 transmembrane ER and ERGIC protein ENCODES a protein that exhibits ceramide binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); asthma (ortholog); Dwarfism (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955403 57926711 57938698 - 102014524 AGCD01003169;GBBH01208454;GBCB01050515;XM_013515028 XP_013370482 MODEL 8708721 pseudo LOC102021711 disintegrin and metalloproteinase domain-containing protein 10 pseudogene NW_004955550 500606 504358 - 102021711 AGCD01072509 MODEL 9001349 pseudo LOC102003773 60S ribosomal protein L27a pseudogene NW_004955491 6023903 6024578 + 102003773 AGCD01060512 MODEL 8705061 ncrna LOC102009225 uncharacterized LOC102009225 NW_004955549 375942 379270 + 102009225 AGCD01072423;GBDF01288013;XR_264913 MODEL 8951458 pseudo LOC102012743 spliceosome-associated protein CWC15 homolog pseudogene NW_004955409 26641679 26646568 + 102012743 AGCD01010196 MODEL 39133746 misc_rna 7SK 7SK RNA 39133902 misc_rna 7SK 7SK RNA 9063939 protein-coding Ankrd10 ankyrin repeat domain 10 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955404 1928285 1954193 + 102019014 AGCD01003237;AGCD01003238;GBBH01002947;XM_005373997;XM_013515744;XR_259288 XP_005374054;XP_013371198 MODEL 9054230 protein-coding Aldh18a1 aldehyde dehydrogenase 18 family member A1 ENCODES a protein that exhibits delta1-pyrroline-5-carboxylate synthetase activity (ortholog); glutamate 5-kinase activity (ortholog); glutamate-5-semialdehyde dehydrogenase activity (ortholog); INVOLVED IN glutamate metabolic process (ortholog); L-citrulline biosynthetic process (ortholog); L-glutamate catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); asthma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955507 1892087 1946526 - 102009637 AGCD01065573;AGCD01065574;AGCD01065575;GBDJ01272098;XM_005407547;XM_005407548;XM_013506238 XP_005407604;XP_005407605;XP_013361692 MODEL 8821803 ncrna LOC102008117 uncharacterized LOC102008117 NW_004955493 654340 655511 - 102008117 AGCD01060859;GBDK01039914;XR_264062 MODEL 8883029 protein-coding Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA translocase activity (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog) NW_004955475 11596405 11629186 - 102012755 AGCD01055158;AGCD01055159;AGCD01055160;AGCD01055161;AGCD01055162;GBDI01367112;XM_005401684 XP_005401741 MODEL 39131832 rrna 5S_rRNA 5S ribosomal RNA 8938138 protein-coding LOC102009589 olfactory receptor 8B12-like NW_004955412 25555457 25557190 - 102009589 AGCD01013160;XM_005378425 XP_005378482 MODEL 8737531 protein-coding LOC102008486 vomeronasal type-1 receptor 4-like NW_004955603 3670 4617 + 102008486 AGCD01076801;XM_005414840 XP_005414897 MODEL 8860849 protein-coding Cdc50b cell division cycle 50 P4-ATPase accessory subunit B ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); INVOLVED IN aminophospholipid transport (ortholog); endosomal transport (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) NW_004955466 8426706 8430851 + 102013399 AGCD01050989;GBCE01074938;GBDK01075274;XM_005399166 XP_005399223 MODEL 39134337 misc_rna 7SK 7SK RNA 8792921 protein-coding Ehbp1l1 EH domain binding protein 1 like 1 INVOLVED IN cell morphogenesis (ortholog); enucleation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN recycling endosome (ortholog) NW_004955422 19670778 19689008 - 102005388 AGCD01023026;AGCD01023027;GBCB01006443;GBDI01078671;XM_005384477;XM_005384478;XM_005384479;XM_005384480;XM_005384481;XM_005384482;XM_005384483;XM_013513864;XM_013513865;XM_013513866;XM_013513867 XP_005384534;XP_005384535;XP_005384536;XP_005384537;XP_005384538;XP_005384539;XP_005384540;XP_013369318;XP_013369319;XP_013369320;XP_013369321 MODEL 8939359 protein-coding LOC102004484 olfactory receptor 13D1 NW_004955419 21750870 21752319 - 102004484 AGCD01020283;GBDJ01341197;XM_005382786 XP_005382843 MODEL 8985956 protein-coding Ccdc184 coiled-coil domain containing 184 FOUND IN cytoplasm (ortholog) NW_004955500 7051998 7053848 + 102027762 AGCD01063899;GBBH01045922;GBDF01005594;XM_005406646 XP_005406703 MODEL 8846337 ncrna LOC102006975 uncharacterized LOC102006975 NW_004955405 613272 642517 + 102006975 AGCD01004581;AGCD01004582;GBDF01305850;XR_001235174;XR_001235177;XR_259353;XR_259354 MODEL 8834490 protein-coding LOC102011130 chromosome unknown open reading frame, human C20orf173 NW_004955422 25895181 25897125 + 102011130 AGCD01023269;AGCD01023270;GBDF01017778;XM_005384792 XP_005384849 MODEL 10122869 protein-coding Atp5me ATP synthase membrane subunit e ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH heart disease (ortholog); Mesothelioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955404 11420964 11421171 - 106149131 AGCD01003426;XM_013517042 XP_013372496 MODEL 8952241 protein-coding Hsd17b13 hydroxysteroid 17-beta dehydrogenase 13 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN positive regulation of lipid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog) NW_004955474 2532213 2554324 + 102016376 AGCD01054298;GBCQ01159342;XM_005401338 XP_005401395 MODEL 8886971 ncrna LOC102004111 uncharacterized LOC102004111 NW_004955434 23261266 23296395 + 102004111 AGCD01032700;AGCD01032701;GBDK01349819;XR_001234809;XR_001234810;XR_001234811;XR_001234812;XR_261646 MODEL 9051062 protein-coding Adsl adenylosuccinate lyase ENCODES a protein that exhibits (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (ortholog); identical protein binding (ortholog); N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenylosuccinase lyase deficiency (ortholog); Ataxia (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955413 26067463 26084669 + 102007645 AGCD01014422;GBCB01011117;XM_005379310;XM_005379312;XM_013511421 XP_005379367;XP_005379369;XP_013366875 MODEL 8840137 protein-coding Adad1 adenosine deaminase domain containing 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955428 18190927 18220361 - 102015426 AGCD01028058;GBDF01008505;XM_005386771;XM_005386772;XM_005386773 XP_005386828;XP_005386829;XP_005386830 MODEL 8860742 protein-coding LOC102010344 tubulin alpha-3 chain NW_004955461 6060418 6069340 - 102010344 AGCD01048891;GBDK01010972;XM_005398006 XP_005398063 MODEL 8869850 protein-coding Cenatac centrosomal AT-AC splicing factor INVOLVED IN chromosome separation (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of centrosome duplication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); U12-type precatalytic spliceosome (ortholog) NW_004955412 20113844 20126783 + 102021540 AGCD01012993;AGCD01012994;GBDF01223007;XM_005378286 XP_005378343 MODEL 9053340 protein-coding Fbxo38 F-box protein 38 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); positive regulation of T cell activation (ortholog); positive regulation of T cell mediated immune response to tumor cell (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); autosomal dominant distal hereditary motor neuronopathy 6 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955415 5841269 5888830 - 102004801 AGCD01016002;GBDI01216496;XM_005380634;XM_005380635;XM_005380636;XM_005380637;XM_005380638;XM_013512294 XP_005380691;XP_005380692;XP_005380693;XP_005380694;XP_005380695;XP_013367748 MODEL 39131366 protein-coding DYTN dystrotelin 8753042 protein-coding Cib4 calcium and integrin binding family member 4 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955469 8604866 8669890 - 102015188 AGCD01052476;AGCD01052477;AGCD01052478;GBDF01156204;XM_005400438 XP_005400495 MODEL 8919827 protein-coding Gps1 G protein pathway suppressor 1 INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955506 1105157 1110129 - 102016730 AGCD01065245;GBBH01090750;XM_005407221;XM_005407223;XM_005407224;XM_013506096 XP_005407278;XP_005407280;XP_005407281;XP_013361550 MODEL 8804605 protein-coding Cfap96 cilia and flagella associated protein 96 ASSOCIATED WITH colorectal cancer (ortholog); developmental and epileptic encephalopathy 1 (ortholog); intellectual disability (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic microtubule (ortholog) NW_004955403 23617764 23634689 - 102025310 AGCD01002248;GBBH01172709;XM_005373458;XM_005373459;XM_005373461;XM_013512932;XM_013512939;XM_013512946 XP_005373515;XP_005373516;XP_005373518;XP_013368386;XP_013368393;XP_013368400 MODEL 39132026 rrna 5S_rRNA 5S ribosomal RNA 8839501 protein-coding Dhrs9 dehydrogenase/reductase 9 ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); androgen metabolic process (ortholog); progesterone metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Birth Weight (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955449 5360486 5380279 - 102030487 AGCD01041929;GBDF01028240;XM_005393265;XM_013518802 XP_005393322;XP_013374256 MODEL 8802192 protein-coding Aph1a aph-1A gamma-secretase subunit ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid precursor protein metabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 506297 509787 + 102016038 AGCD01013472;GBBH01063314;XM_005378689 XP_005378746 MODEL 8799016 pseudo LOC102006594 tRNA methyltransferase 10 homolog A-like NW_004955425 7417174 7418366 + 102006594 AGCD01025385 MODEL 9043490 protein-coding Brsk1 BR serine/threonine kinase 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); magnesium ion binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN associative learning (ortholog); axonogenesis (ortholog); centrosome duplication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cholinergic synapse (ortholog); cytoplasm (ortholog) NW_004955567 924728 943092 - 102027122 AGCD01074446;AGCD01074447;GBCE01016557;GBDJ01062535;XM_013509249 XP_013364703 MODEL 8777477 ncrna LOC102005544 uncharacterized LOC102005544 NW_004955403 19218644 19229973 + 102005544 AGCD01002120;GBDF01056356;XR_001233395 MODEL 8717181 protein-coding LOC102008487 actin cytoskeleton-regulatory complex protein pan1-like NW_004955451 2446558 2456251 - 102008487 AGCD01043009;GBBH01184630;XM_013519305 XP_013374759 MODEL 8827763 protein-coding Cartpt CART prepropeptide INVOLVED IN adult feeding behavior (ortholog); behavioral response to cocaine (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955575 551991 555118 + 102030255 AGCD01075225;GBDJ01159042;XM_005413933 XP_005413990 MODEL 9003155 protein-coding Cog6 component of oligomeric golgi complex 6 INVOLVED IN Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arboleda-Tham syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN COG complex (ortholog) NW_004955431 6641116 6703797 - 102017264 AGCD01030060;AGCD01030061;AGCD01030062;AGCD01030063;AGCD01030064;GBCQ01008552;XM_005387638 XP_005387695 MODEL 9063433 protein-coding Gcnt4 glucosaminyl (N-acetyl) transferase 4 INVOLVED IN homeostasis of number of cells (ortholog); inter-male aggressive behavior (ortholog); kidney morphogenesis (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955425 25661648 25681948 + 102027426 AGCD01025927;GBCQ01026024;XM_005386055;XM_005386056;XM_013514799;XM_013514800 XP_005386112;XP_005386113;XP_013370253;XP_013370254 MODEL 8860920 pseudo LOC102017634 matrin-3 pseudogene NW_004955408 32748713 32750084 + 102017634 AGCD01008854 MODEL 8986839 protein-coding Itpr3 inositol 1,4,5-trisphosphate receptor type 3 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion transport (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acrodermatitis (ortholog); acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955437 2055782 2106709 + 102009419 AGCD01034258;AGCD01034259;AGCD01034260;GBCE01054410;GBDJ01082282;XM_005389506 XP_005389563 MODEL 8982936 protein-coding Ccnyl1 cyclin Y like 1 INVOLVED IN flagellated sperm motility (ortholog); neurogenesis (ortholog); regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955457 7295884 7328690 - 102010031 AGCD01046875;AGCD01046876;GBDF01003287;XM_005396979 XP_005397036 MODEL 39134036 misc_rna 7SK 7SK RNA 8950800 protein-coding LOC102012744 cleavage stimulation factor subunit 2 tau variant-like NW_004955462 1470966 1474745 + 102012744 AGCD01049120;XM_013521365 XP_013376819 MODEL 39133749 misc_rna 7SK 7SK RNA 8952289 protein-coding Adad2 adenosine deaminase domain containing 2 INVOLVED IN spermatid development (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955564 113943 120083 - 102018781 AGCD01074187;GBDF01007545;XM_005413219;XM_013509204 XP_005413276;XP_013364658 MODEL 8927603 protein-coding Ifit2 interferon induced protein with tetratricopeptide repeats 2 INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-alpha (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955425 3685626 3692482 - 102016400 AGCD01025295;GBDK01239902;XM_005385851 XP_005385908 MODEL 39133750 misc_rna 7SK 7SK RNA 8996883 protein-coding Cabs1 calcium binding protein, spermatid associated 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Anaphylaxis (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); mitochondrial inner membrane (ortholog) NW_004955447 2581173 2582481 - 102026487 AGCD01040548;GBDF01007154;XM_013518486 XP_013373940 MODEL 8931922 protein-coding Ercc6l2 ERCC excision repair 6 like 2 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); DNA damage response (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); atrial heart septal defect (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) NW_004955422 22753008 22890339 + 102007243 AGCD01023165;AGCD01023166;AGCD01023167;AGCD01023168;AGCD01023169;AGCD01023170;AGCD01023171;AGCD01023172;GBDJ01044876;XM_005384686;XM_013514250;XM_013514251;XM_013514252 XP_005384743;XP_013369704;XP_013369705;XP_013369706 MODEL 8843304 protein-coding Trim55 tripartite motif containing 55 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN diapedesis (ortholog); macrophage migration (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955444 12992362 13034621 - 102018137 AGCD01039088;GBCB01022555;XM_005392155;XM_005392156;XM_005392157;XM_005392158 XP_005392212;XP_005392213;XP_005392214;XP_005392215 MODEL 8960685 protein-coding Kcnh7 potassium voltage-gated channel subfamily H member 7 ENCODES a protein that exhibits heme binding (ortholog); inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN circadian rhythm (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog) NW_004955449 11052767 11495193 + 102016437 AGCD01042083;AGCD01042084;AGCD01042085;AGCD01042086;AGCD01042087;AGCD01042088;AGCD01042089;AGCD01042090;AGCD01042091;XM_013518746 XP_013374200 MODEL 8979505 pseudo LOC102021719 60S ribosomal protein L26-like NW_004955448 10606482 10609803 - 102021719 AGCD01041495 MODEL 9041056 protein-coding LOC102011531 vomeronasal type-1 receptor 90-like NW_004955414 14947178 14948107 - 102011531 AGCD01015163;XM_005380439 XP_005380496 MODEL 10242450 ncrna LOC106149926 uncharacterized LOC106149926 NW_004955457 13617255 13630462 + 106149926 AGCD01047049;XR_001236408 MODEL 9000649 ncrna LOC102003774 uncharacterized LOC102003774 NW_004955422 13750163 13762795 - 102003774 AGCD01022838;GBCB01073765;XR_001233882;XR_001233883;XR_260871;XR_260872 MODEL 8713054 protein-coding Adss1 adenylosuccinate synthase 1 ENCODES a protein that exhibits actin filament binding (ortholog); adenylosuccinate synthase activity (ortholog); GTPase activity (ortholog); INVOLVED IN AMP biosynthetic process (ortholog); AMP salvage (ortholog); cellular response to electrical stimulus (ortholog); PARTICIPATES IN Canavan disease pathway; de novo purine biosynthetic pathway; ASSOCIATED WITH blepharospasm (ortholog); Breast Cancer, Familial (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog) NW_004955538 3179299 3196251 + 102026474 AGCD01071153;GBCB01005620;GBDJ01133679;XM_005410839;XM_013507879 XP_005410896;XP_013363333 MODEL 9038941 protein-coding Gcnt7 glucosaminyl (N-acetyl) transferase family member 7 NW_004955445 2737228 2750104 + 102008783 AGCD01039364;GBBH01056981;XM_005392265;XM_005392266 XP_005392322;XP_005392323 MODEL 8901070 protein-coding Il22ra1 interleukin 22 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-20 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH lung cancer (ortholog); lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); signaling receptor complex (ortholog) NW_004955452 3975597 3992809 - 102025865 AGCD01043962;GBDJ01315187;XM_005394795 XP_005394852 MODEL 9063634 protein-coding Fbxo39 F-box protein 39 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955467 12257700 12264977 + 102008520 AGCD01051627;GBBH01097078;XM_005399672;XM_005399673;XM_005399674;XM_005399675 XP_005399729;XP_005399730;XP_005399731;XP_005399732 MODEL 8895275 protein-coding Lig3 DNA ligase 3 ENCODES a protein that exhibits DNA ligase (ATP) activity (ortholog); DNA ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); double-strand break repair (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alacrima (ortholog); anhidrosis (ortholog); FOUND IN condensed nuclear chromosome (ortholog); DNA ligase III-XRCC1 complex (ortholog); mitochondrion (ortholog) NW_004955481 9696050 9716154 + 102006246 AGCD01057112;GBCB01039491;GBDF01007194;XM_013503401 XP_013358855 MODEL 8827330 protein-coding Adam10 ADAM metallopeptidase domain 10 ENCODES a protein that exhibits endopeptidase activity (ortholog); metallodipeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN adherens junction organization (ortholog); amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Alzheimer's disease 18 (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955450 15853372 15927966 + 102014962 AGCD01042822;AGCD01042823;AGCD01042824;AGCD01042825;AGCD01042826;GBBH01091689;GBDF01153614;XM_013518929 XP_013374383 MODEL 8800844 protein-coding Gps2 G protein pathway suppressor 2 ENCODES a protein that exhibits cyclin binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955467 9600829 9604148 + 102021866 AGCD01051519;GBDI01060015;XM_005399523;XM_005399524;XM_005399525 XP_005399580;XP_005399581;XP_005399582 MODEL 39134338 misc_rna 7SK 7SK RNA 8709099 protein-coding LOC102006596 3-ketoacyl-CoA thiolase B, peroxisomal NW_004955427 25541841 25552096 - 102006596 AGCD01027545;GBDK01085734;XM_013515208 XP_013370662 MODEL 8966553 protein-coding Ablim2 actin binding LIM protein family member 2 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); myofibril (ortholog) NW_004955514 2800758 2920926 + 102011353 AGCD01067089;AGCD01067090;GBDJ01123377;XM_005408783;XM_005408784;XM_005408785;XM_005408786;XM_005408787;XM_005408789;XM_013506772;XM_013506773;XM_013506774;XM_013506775;XM_013506776;XM_013506778;XM_013506779;XM_013506780;XM_013506781;XM_013506782;XM_013506783 XP_005408840;XP_005408841;XP_005408842;XP_005408843;XP_005408844;XP_005408846;XP_013362226;XP_013362227;XP_013362228;XP_013362229;XP_013362230;XP_013362232;XP_013362233;XP_013362234;XP_013362235;XP_013362236;XP_013362237 MODEL 8892948 protein-coding LOC102006979 keratin-associated protein 20-2-like NW_004955407 30156701 30156859 + 102006979 AGCD01007628;XM_005375640 XP_005375697 MODEL 8791822 protein-coding Atp5mf ATP synthase membrane subunit f ENCODES a protein that exhibits proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955460 15129651 15136722 - 102010455 AGCD01048768;GBCE01002331;XM_005397947 XP_005398004 MODEL 8906792 protein-coding Ehd1 EH domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); Disease Progression (ortholog); high grade glioma (ortholog); FOUND IN ciliary pocket membrane (ortholog); ciliary transition zone (ortholog); cilium (ortholog) NW_004955422 20302409 20324591 + 102027079 AGCD01023074;GBCQ01035903;XM_005384552 XP_005384609 MODEL 8961865 protein-coding Clnk cytokine dependent hematopoietic cell linker ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); intracellular signal transduction (ortholog); mast cell degranulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mast cell granule (ortholog); protein-containing complex (ortholog) NW_004955549 2166891 2375902 + 102009993 AGCD01072465;AGCD01072466;AGCD01072467;AGCD01072468;GBBH01036416;XM_013508541;XM_013508542;XM_013508543 XP_013363995;XP_013363996;XP_013363997 MODEL 8789854 ncrna LOC102011132 uncharacterized LOC102011132 NW_004955424 5106865 5118485 + 102011132 AGCD01024384;GBDF01016619;XR_261042 MODEL 8943167 protein-coding Hsd17b14 hydroxysteroid 17-beta dehydrogenase 14 ENCODES a protein that exhibits D-threo-aldose 1-dehydrogenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN L-fucose catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); High Myopia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955559 1775889 1784598 + 102003290 AGCD01073666;GBCQ01039526;XM_005412929;XM_013509038 XP_005412986;XP_013364492 MODEL 8752923 pseudo LOC102009226 40S ribosomal protein S13 pseudogene NW_004955550 1911159 1911637 - 102009226 AGCD01072597 MODEL 8728966 pseudo LOC102010348 zinc finger CCHC domain-containing protein 8-like NW_004955411 3492784 3499691 - 102010348 AGCD01011553 MODEL 9019461 protein-coding LOC102017635 olfactory receptor 6C3-like NW_004955458 2547175 2548122 - 102017635 AGCD01047237;XM_005397495 XP_005397552 MODEL 8921301 ncrna LOC102008122 uncharacterized LOC102008122 NW_004955423 9990855 9994777 + 102008122 AGCD01023668;GBDF01225396;XR_001234046 MODEL 8989734 protein-coding Dytn dystrotelin ASSOCIATED WITH cervical cancer (ortholog); pancreatic adenocarcinoma (ortholog); thymoma (ortholog) NW_004955457 8269960 8332498 + 102027494 AGCD01046907;GBDF01273348;XM_013520662 XP_013376116 MODEL 8793056 protein-coding Ankrd11 ankyrin repeat domain containing 11 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone development (ortholog); cardiac neural crest cell differentiation involved in heart development (ortholog); cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); anemia (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955541 2921230 3033612 - 102008570 AGCD01071433;GBCB01040226;GBDF01157743;XM_005411033 XP_005411090 MODEL 39131833 rrna 5S_rRNA 5S ribosomal RNA 8860096 pseudo LOC102009590 major facilitator superfamily domain-containing protein 8-like NW_004955467 9964828 9982343 - 102009590 AGCD01051537;AGCD01051538 MODEL 8993599 protein-coding Ifit3 interferon induced protein with tetratricopeptide repeats 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-beta (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congestive heart failure (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955425 3671303 3692478 - 102016726 AGCD01025295;XM_013514858 XP_013370312 MODEL 8701050 protein-coding Dhrsx dehydrogenase/reductase X-linked ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); dolichal reductase (NADPH) activity (ortholog); polyprenol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN dolichyl monophosphate biosynthetic process (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Congenital disorder of glycosylation, type 1DD (ortholog); FOUND IN extracellular region (ortholog); lipid droplet (ortholog) NW_004955499 1360636 1471141 - 102010069 AGCD01063348;AGCD01063349;AGCD01063350;AGCD01063351;AGCD01063352;AGCD01063353;AGCD01063354;AGCD01063355;GBCB01024741;GBDF01253653;XM_005406518;XM_013505592 XP_005406575;XP_013361046 MODEL 8917253 protein-coding Eml1 EMAP like 1 ENCODES a protein that exhibits microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN brain development (ortholog); hematopoietic progenitor cell differentiation (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); congenital nervous system abnormality (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955438 20991432 21137570 + 102030477 AGCD01035528;AGCD01035529;GBCB01022439;XM_005390419;XM_005390420;XM_005390421;XM_005390422;XM_005390423;XM_005390424;XM_005390425 XP_005390476;XP_005390477;XP_005390478;XP_005390479;XP_005390480;XP_005390481;XP_005390482 MODEL 8952730 protein-coding Ccdc186 coiled-coil domain containing 186 INVOLVED IN glucose homeostasis (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); response to bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955431 19120937 19171332 - 102013530 AGCD01030441;AGCD01030442;AGCD01030443;GBDI01012386;XM_005387811;XM_005387812;XM_005387813;XM_013515849 XP_005387868;XP_005387869;XP_005387870;XP_013371303 MODEL 8805688 protein-coding Cabyr calcium binding tyrosine phosphorylation regulated ENCODES a protein that exhibits calcium ion binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colorectal Neoplasms (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); motile cilium (ortholog) NW_004955402 12508524 12529230 + 102008364 AGCD01000391;GBDF01002956;XM_005372711;XM_005372713;XM_005372714;XM_013504625;XM_013504661 XP_005372768;XP_005372770;XP_005372771;XP_013360079;XP_013360115 MODEL 8880268 protein-coding Brsk2 BR serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); ATPase binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axonogenesis (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); distal axon (ortholog) NW_004955476 10911515 10951544 - 102003123 AGCD01055431;GBDF01194489;XM_013502987;XM_013502988;XM_013502989;XM_013502990;XM_013502991;XM_013502992;XM_013502993;XM_013502994;XR_001230801 XP_013358441;XP_013358442;XP_013358443;XP_013358444;XP_013358445;XP_013358446;XP_013358447;XP_013358448 MODEL 8738801 pseudo LOC102004115 ferritin heavy chain pseudogene NW_004955535 3341451 3342152 + 102004115 AGCD01070692;XM_005410497 MODEL 8840490 protein-coding Aph1b aph-1B gamma-secretase subunit ENCODES a protein that exhibits endopeptidase activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); locomotory behavior (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN gamma-secretase complex (ortholog); membrane (ortholog); transport vesicle (ortholog) NW_004955450 12000682 12022183 - 102027596 AGCD01042686;GBDF01044997;XM_005393791;XM_013518982;XM_013518983 XP_005393848;XP_013374436;XP_013374437 MODEL 8797876 protein-coding Cog7 component of oligomeric golgi complex 7 INVOLVED IN glycoprotein biosynthetic process (ortholog); Golgi organization (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); congenital disorder of glycosylation type IIe (ortholog); genetic disease (ortholog); FOUND IN COG complex (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955493 1967157 2031220 - 102021562 AGCD01060916;AGCD01060917;AGCD01060918;AGCD01060919;AGCD01060920;AGCD01060921;AGCD01060922;GBDI01074716;GBDK01146141;XM_013504805 XP_013360259 MODEL 8886344 pseudo LOC102006983 39S ribosomal protein L32, mitochondrial pseudogene NW_004955408 16943160 16949169 + 102006983 AGCD01008449 MODEL 8859869 protein-coding Trim56 tripartite motif containing 56 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); defense response to virus (ortholog); host-mediated suppression of symbiont invasion (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955456 16181890 16185598 - 102028268 AGCD01046693;GBBH01228287;XM_005396871;XM_013520643 XP_005396928;XP_013376097 MODEL 8924944 protein-coding Cend1 cell cycle exit and neuronal differentiation 1 INVOLVED IN adult walking behavior (ortholog); cerebellar granular layer maturation (ortholog); cerebellar Purkinje cell differentiation (ortholog); FOUND IN mitochondrion (ortholog); vesicle (ortholog) NW_004955476 11339586 11341996 + 102011200 AGCD01055452;GBDI01168023;XM_005401817 XP_005401874 MODEL 39131295 protein-coding CLNK cytokine dependent hematopoietic cell linker 39134037 misc_rna 7SK 7SK RNA 8902435 protein-coding Aldh1a2 aldehyde dehydrogenase 1 family member A2 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); retinal binding (ortholog); retinal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); anterior/posterior pattern specification (ortholog); blood vessel development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Coronary Occlusion (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955450 16406578 16453048 + 102018142 AGCD01042843;AGCD01042844;GBCB01109320;XM_005393844;XM_005393845 XP_005393901;XP_005393902 MODEL 9052637 protein-coding Ccp110 centriolar coiled-coil protein 110 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); ciliary basal body organization (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); microtubule organizing center (ortholog) NW_004955442 3223549 3261437 + 102008461 AGCD01037500;AGCD01037501;AGCD01037502;AGCD01037503;GBDK01361065;XM_005391108;XM_005391109;XM_005391110;XM_013517705 XP_005391165;XP_005391166;XP_005391167;XP_013373159 MODEL 39132028 rrna 5S_rRNA 5S ribosomal RNA 8753405 pseudo LOC102008123 protein S100-A10 pseudogene NW_004955495 7868008 7869132 - 102008123 AGCD01062169 MODEL 8930496 protein-coding LOC102005547 breast cancer type 1 susceptibility protein homolog NW_004956027 800 5983 - 102005547 AGCD01078904;GBBH01191619;GBCQ01157973;XM_005415162 XP_005415219 MODEL 9007818 protein-coding Fbxo4 F-box protein 4 ENCODES a protein that exhibits protein homodimerization activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); cellular response to ionizing radiation (ortholog); cellular senescence (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog); ubiquitin ligase complex (ortholog) NW_004955426 26046742 26066747 + 102013191 AGCD01026736;AGCD01026737;GBCQ01177989;GBDK01060205;XM_013514998 XP_013370452 MODEL 8941900 protein-coding Cdc5l cell division cycle 5 like ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); leucine zipper domain binding (ortholog); INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-2 (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); DNA replication factor A complex (ortholog) NW_004955437 9990613 10032034 + 102024383 AGCD01034555;AGCD01034556;GBDF01003263;XM_013517013 XP_013372467 MODEL 8971611 protein-coding LOC102008488 palladin NW_004955403 37248908 37286650 - 102008488 AGCD01002565;GBCQ01040632;GBDJ01020208;XM_013513428 XP_013368882 MODEL 39134339 misc_rna 7SK 7SK RNA 9009426 protein-coding Ereg epiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholesteatoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955474 612440 627606 + 102006571 AGCD01054224;GBCC01052167;XM_005401312 XP_005401369 MODEL 8916944 pseudo LOC102021720 thioredoxin-like NW_004955449 3639955 3645607 - 102021720 AGCD01041858 MODEL 8925870 protein-coding Ablim3 actin binding LIM protein family member 3 INVOLVED IN cilium assembly (ortholog); lamellipodium assembly (ortholog); positive regulation of protein localization to mitochondrion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); stress fiber (ortholog) NW_004955415 5151445 5261300 - 102028410 AGCD01015991;GBCB01041836;XM_005380619;XM_005380622;XM_005380626;XM_013512341;XM_013512342;XM_013512343;XM_013512344 XP_005380676;XP_005380679;XP_005380683;XP_013367795;XP_013367796;XP_013367797;XP_013367798 MODEL 8799894 pseudo LOC102011538 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955477 4017638 4038493 + 102011538 AGCD01055577 MODEL 8833157 protein-coding Ehd2 EH domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); endocytic recycling (ortholog); endocytosis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN caveola (ortholog); cytosol (ortholog); endosome membrane (ortholog) NW_004955574 1490877 1503651 + 102014187 AGCD01075183;GBDJ01021130;XM_005413883 XP_005413940 MODEL 8968399 protein-coding LOC102021725 serine protease 52-like NW_004955403 52095441 52106295 - 102021725 AGCD01003001;GBDF01120892;XM_005373801 XP_005373858 MODEL 8712175 protein-coding Cibar1 CBY1 interacting BAR domain containing 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cilium assembly (ortholog); inner mitochondrial membrane organization (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH ciliopathy (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955417 10060500 10080119 + 102018928 AGCD01018065;GBDF01009145;XM_005381785 XP_005381842 MODEL 8872178 pseudo LOC102012748 mothers against decapentaplegic homolog 5 pseudogene NW_004955412 6157467 6159343 + 102012748 AGCD01012666 MODEL 8920097 protein-coding Gcsam germinal center associated signaling and motility ENCODES a protein that exhibits actin binding (ortholog); myosin II binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of lymphocyte migration (ortholog); regulation of B cell receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955427 12524261 12533773 - 102025142 AGCD01027218;GBDI01086335;XM_013515053 XP_013370507 MODEL 8872589 protein-coding Cfap97 cilia and flagella associated protein 97 ASSOCIATED WITH colon adenocarcinoma (ortholog); dilated cardiomyopathy (ortholog); melanoma (ortholog) NW_004955403 23821502 23864809 + 102029140 AGCD01002257;AGCD01002258;AGCD01002259;AGCD01002260;AGCD01002261;GBDF01047888;XM_005373472;XM_005373474;XM_005373475;XM_005373476;XM_005373477;XM_005373478 XP_005373529;XP_005373531;XP_005373532;XP_005373533;XP_005373534;XP_005373535 MODEL 39133751 misc_rna 7SK 7SK RNA 8740316 pseudo LOC102004485 40S ribosomal protein S14 pseudogene NW_004955484 6819345 6824612 + 102004485 AGCD01058294 MODEL 8822985 protein-coding Itprid1 ITPR interacting domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); lung squamous cell carcinoma (ortholog) NW_004955410 32564108 32691390 + 102025444 AGCD01011340;AGCD01011341;AGCD01011342;AGCD01011343;AGCD01011344;AGCD01011345;AGCD01011346;AGCD01011347;AGCD01011348;GBDK01242014;XM_005377516;XM_005377517;XM_005377522;XM_013510630;XM_013510631;XM_013510633 XP_005377573;XP_005377574;XP_005377579;XP_013366084;XP_013366085;XP_013366087 MODEL 9028476 protein-coding Lig4 DNA ligase 4 ENCODES a protein that exhibits AMP binding (ortholog); ATP binding (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cell population proliferation (ortholog); cellular response to ionizing radiation (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); colorectal cancer (ortholog); FOUND IN condensed chromosome (ortholog); DNA ligase IV complex (ortholog); DNA-dependent protein kinase-DNA ligase 4 complex (ortholog) NW_004955404 3606077 3615193 + 102024416 AGCD01003279;GBDF01038894;XM_005374013;XM_005374014;XM_013515840;XM_013515843;XM_013515847;XM_013515850 XP_005374070;XP_005374071;XP_013371294;XP_013371297;XP_013371301;XP_013371304 MODEL 8978684 protein-coding Adam11 ADAM metallopeptidase domain 11 INVOLVED IN behavioral response to acetic acid induced pain (ortholog); behavioral response to formalin induced pain (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN perikaryon (ortholog); presynaptic membrane (ortholog) NW_004955451 17608732 17614469 + 102016442 AGCD01043763;GBCB01131517;GBCE01084702;XM_013519435 XP_013374889 MODEL 9041102 protein-coding Ccdc187 coiled-coil domain containing 187 NW_004955513 4393583 4433285 + 102014158 AGCD01066927;GBBH01061817;XM_013506618;XM_013506619;XM_013506620;XM_013506621;XM_013506622;XM_013506623;XM_013506624;XM_013506625;XM_013506626;XM_013506627;XM_013506628;XM_013506629;XM_013506630;XM_013506631;XM_013506632;XM_013506633;XM_013506634;XM_013506635;XM_013506636;XM_013506637 XP_013362072;XP_013362073;XP_013362074;XP_013362075;XP_013362076;XP_013362077;XP_013362078;XP_013362079;XP_013362080;XP_013362081;XP_013362082;XP_013362083;XP_013362084;XP_013362085;XP_013362086;XP_013362087;XP_013362088;XP_013362089;XP_013362090;XP_013362091 MODEL 39133903 misc_rna 7SK 7SK RNA 10251931 ncrna LOC106149927 uncharacterized LOC106149927 NW_004955406 12958083 12984947 - 106149927 AGCD01005929;AGCD01005930;GBDF01144794;XR_001236410 MODEL 8885517 protein-coding LOC102009229 kallikrein-4-like NW_004955558 1932972 1936783 + 102009229 AGCD01073488;GBDF01079517;XM_005412753 XP_005412810 MODEL 8709888 ncrna LOC102010349 uncharacterized LOC102010349 NW_004955465 9065822 9075222 + 102010349 AGCD01050484;GBDK01032471;XR_001236720;XR_263253 MODEL 9020231 ncrna LOC102021734 uncharacterized LOC102021734 NW_004955407 40982526 40988715 + 102021734 AGCD01007854;GBCE01120715;XR_001231377;XR_001231379 MODEL 9046661 protein-coding Aldh1a3 aldehyde dehydrogenase 1 family member A3 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); NAD+ binding (ortholog); INVOLVED IN embryonic camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); face development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); isolated microphthalmia 8 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955416 27823611 27858112 + 102008530 AGCD01017621;AGCD01017622;GBCQ01034845;XM_005381642 XP_005381699 MODEL 8937522 protein-coding Gpsm1 G protein signaling modulator 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); INVOLVED IN negative regulation of GTPase activity (ortholog); negative regulation of guanyl-nucleotide exchange factor activity (ortholog); positive regulation of macroautophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cell cortex (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955513 4363534 4387356 - 102011690 AGCD01066927;GBCE01052148;XM_005408511;XM_005408513;XM_005408516 XP_005408568;XP_005408570;XP_005408573 MODEL 39132029 rrna 5S_rRNA 5S ribosomal RNA 39131834 rrna 5S_rRNA 5S ribosomal RNA 8826937 protein-coding Ankrd12 ankyrin repeat domain 12 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955402 2705252 2799682 - 102025636 AGCD01000088;AGCD01000089;AGCD01000090;GBBH01165639;XM_005372604;XM_005372606;XM_013515845;XM_013515902 XP_005372661;XP_005372663;XP_013371299;XP_013371356 MODEL 8738993 protein-coding Ifit5 interferon induced protein with tetratricopeptide repeats 5 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); poly(U) RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of viral genome replication (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Human Influenza (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); apical part of cell (ortholog); IkappaB kinase complex (ortholog) NW_004955425 3569448 3575043 - 102015970 AGCD01025292;GBDF01065309;XM_013514766 XP_013370220 MODEL 8745483 ncrna LOC102006597 uncharacterized LOC102006597 NW_004955511 5768199 5770593 + 102006597 AGCD01066580;GBCB01022175;XR_001231697 MODEL 8990641 protein-coding Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 ENCODES a protein that exhibits 2-oxoadipate dehydrogenase activity (ortholog); oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (ortholog); INVOLVED IN amino acid catabolic process (ortholog); generation of precursor metabolites and energy (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH 2-aminoadipic 2-oxoadipic aciduria (ortholog); Abnormal Reflexes (ortholog); brachydactyly (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxoadipate dehydrogenase complex (ortholog) NW_004955462 103501 163472 + 102004909 AGCD01049069;AGCD01049070;AGCD01049071;GBBH01075996;XM_005398075;XM_013521370 XP_005398132;XP_013376824 MODEL 8904869 protein-coding Kcnh8 potassium voltage-gated channel subfamily H member 8 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); potassium ion transport (ortholog); response to aldosterone (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955430 11298850 11654835 + 102003572 AGCD01029446;AGCD01029447;AGCD01029448;AGCD01029449;AGCD01029450;AGCD01029451;AGCD01029452;AGCD01029453;AGCD01029454;AGCD01029455;AGCD01029456;XM_005387459 XP_005387516 MODEL 8914651 protein-coding Adss2 adenylosuccinate synthase 2 ENCODES a protein that exhibits adenylosuccinate synthase activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); AMP biosynthetic process (ortholog); cellular response to electrical stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 7684979 7715179 - 102007403 AGCD01005774;GBDF01047341;XM_005374781 XP_005374838 MODEL 8881796 pseudo LOC102004117 period circadian protein homolog 3-like NW_004955437 138520 142991 + 102004117 AGCD01034105 MODEL 8886726 protein-coding Brwd1 bromodomain and WD repeat domain containing 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN axoneme (ortholog); motile cilium (ortholog); nucleolus (ortholog) NW_004955407 38003386 38107958 - 102022466 AGCD01007792;AGCD01007793;AGCD01007794;GBCB01009000;GBDJ01213321;XM_013504832;XM_013504835;XM_013504839 XP_013360286;XP_013360289;XP_013360293 MODEL 8908957 ncrna LOC102011133 uncharacterized LOC102011133 NW_004955496 4331938 4345273 + 102011133 AGCD01062320;GBDF01074903;XR_264176 MODEL 8931531 protein-coding Atp5mg ATP synthase membrane subunit g ENCODES a protein that exhibits proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955412 19555736 19563094 + 102009924 AGCD01012962;AGCD01012963;GBDF01009030;XM_005378241 XP_005378298 MODEL 8795351 protein-coding LOC102003778 cationic trypsin-3-like NW_004955494 1217574 1223680 + 102003778 AGCD01061392;XM_013504918 XP_013360372 MODEL 8702540 protein-coding Il22ra2 interleukin 22 receptor subunit alpha 2 ENCODES a protein that exhibits interleukin-22 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); regulation of tyrosine phosphorylation of STAT protein (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); decoy receptor complex (ortholog) NW_004955436 22208267 22219667 + 102019953 AGCD01034087;XM_005389281 XP_005389338 MODEL 9033454 protein-coding Hsd17b2 hydroxysteroid 17-beta dehydrogenase 2 ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); testosterone dehydrogenase (NAD+) activity (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); androgen metabolic process (ortholog); bone development (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; testosterone biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Endometrial Neoplasms (ortholog); endometriosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955564 1884235 1984182 - 102025186 AGCD01074242;AGCD01074243;AGCD01074244;AGCD01074245;AGCD01074246;AGCD01074247;AGCD01074248;AGCD01074249;AGCD01074250;GBDF01025022;XM_005413241;XM_005413242;XM_013509198 XP_005413298;XP_005413299;XP_013364652 MODEL 8826970 protein-coding Cog8 component of oligomeric golgi complex 8 INVOLVED IN Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN COG complex (ortholog); Golgi apparatus (ortholog) NW_004955484 7357066 7363239 + 102027305 AGCD01058328;GBDF01004162;XM_005403555 XP_005403612 MODEL 8779368 ncrna LOC102017636 uncharacterized LOC102017636 NW_004955459 2075530 2078673 + 102017636 AGCD01047982;GBCQ01045566;XR_263005 MODEL 8883518 protein-coding Trim58 tripartite motif containing 58 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); dynein intermediate chain binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of erythrocyte enucleation (ortholog); protein autoubiquitination (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog) NW_004955613 229567 243019 + 102027367 AGCD01077204;AGCD01077205;GBBH01172756;GBBH01172759;XM_013510135;XM_013510136 XP_013365589;XP_013365590 MODEL 8745906 protein-coding Api5 apoptosis inhibitor 5 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of fibroblast apoptotic process (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955422 4121913 4149242 - 102026756 AGCD01022533;AGCD01022534;GBDF01003742;XM_005384088;XM_005384089 XP_005384145;XP_005384146 MODEL 8879634 protein-coding Cenpa centromere protein A INVOLVED IN CENP-A containing chromatin assembly (ortholog); establishment of mitotic spindle orientation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN CENP-A containing chromatin (ortholog); CENP-A containing nucleosome (ortholog); chromosome, centromeric region (ortholog) NW_004955469 8799312 8819637 + 102015830 AGCD01052482;GBDF01084944;XM_005400440;XM_005400441 XP_005400497;XP_005400498 MODEL 8888748 protein-coding Clns1a chloride nucleotide-sensitive channel 1A ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); lipid binding (ortholog); potassium channel activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); chloride transport (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); methylosome (ortholog) NW_004955414 14219909 14239450 + 102009271 AGCD01015143;AGCD01015144;GBDF01052362;XM_005379834;XM_013511809 XP_005379891;XP_013367263 MODEL 8887193 protein-coding Dzank1 double zinc ribbon and ankyrin repeat domains 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955415 26969814 27021767 - 102017120 AGCD01016621;GBDJ01297692;XM_013512227;XM_013512228;XM_013512229 XP_013367681;XP_013367682;XP_013367683 MODEL 8828733 protein-coding LOC102009596 natural cytotoxicity triggering receptor 3 ligand 1-like NW_004955414 32190761 32204203 + 102009596 AGCD01015777;GBBH01134981;XM_005380382;XM_005380383;XM_013512027 XP_005380439;XP_005380440;XP_013367481 MODEL 9010276 pseudo LOC102008128 transcription initiation factor TFIID subunit 9-like NW_004955427 1717479 1718907 + 102008128 AGCD01026879 MODEL 8926075 protein-coding LOC102005548 cytochrome P450 2D6-like NW_004957079 5 1733 + 102005548 AGCD01080475;GBDI01036375;XM_013510243 XP_013365697 MODEL 8897119 ncrna LOC102008489 uncharacterized LOC102008489 NW_004956123 1825 3767 - 102008489 AGCD01079091;GBDF01090413;XR_001232607;XR_265205 MODEL 39131835 rrna 5S_rRNA 5S ribosomal RNA 39134340 misc_rna 7SK 7SK RNA 8887566 protein-coding Dhx15 DEAH-box helicase 15 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); defense response to bacterium (ortholog); defense response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); post-mRNA release spliceosomal complex (ortholog) NW_004955480 451126 502226 + 102026110 AGCD01056582;GBCQ01039272;XM_005402461 XP_005402518 MODEL 9062546 protein-coding Ccdc188 coiled-coil domain containing 188 INVOLVED IN single fertilization (ortholog); sperm mitochondrial sheath assembly (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); male infertility due to acephalic spermatozoa (ortholog) NW_004955442 17962249 17965261 + 102022129 AGCD01037990;GBDF01044084;XM_005391726;XM_005391727;XM_005391728;XM_005391729;XM_005391730;XM_013517767;XM_013517768 XP_005391783;XP_005391784;XP_005391785;XP_005391786;XP_005391787;XP_013373221;XP_013373222 MODEL 9012219 protein-coding Abr ABR activator of RhoGEF and GTPase ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); brain development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955481 2503309 2710667 - 102027641 AGCD01056876;AGCD01056877;AGCD01056878;AGCD01056879;GBCE01117779;GBDJ01075590;XM_005402643 XP_005402700 MODEL 39134038 misc_rna 7SK 7SK RNA 8712275 protein-coding Ehd3 EH domain containing 3 INVOLVED IN cilium assembly (ortholog); early endosome to Golgi transport (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN ciliary pocket membrane (ortholog); ciliary transition zone (ortholog); cilium (ortholog) NW_004955469 12953800 12984296 + 102023575 AGCD01052589;AGCD01052590;GBDK01084893;XM_005400561 XP_005400618 MODEL 8799509 protein-coding Gcsaml germinal center associated signaling and motility like ASSOCIATED WITH acute myeloid leukemia (ortholog); uterine carcinosarcoma (ortholog) NW_004955581 770356 803012 + 102026371 AGCD01075694;AGCD01075695;AGCD01075696;GBDK01432789;XM_013509730 XP_013365184 MODEL 8922858 protein-coding Cdc6 cell division cycle 6 ENCODES a protein that exhibits chromatin binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to vasopressin (ortholog); positive regulation of chromosome segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955451 14857174 14871324 + 102011615 AGCD01043578;AGCD01043579;GBDJ01220384;XM_005394353;XM_005394354;XM_013519196;XM_013519197;XM_013519198 XP_005394410;XP_005394411;XP_013374650;XP_013374651;XP_013374652 MODEL 39133752 misc_rna 7SK 7SK RNA 8779832 protein-coding Fbxo40 F-box protein 40 INVOLVED IN muscle cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); lung squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955427 20979180 20996654 + 102003263 AGCD01027430;AGCD01027431;GBCB01006048;XM_005386488;XM_005386489 XP_005386545;XP_005386546 MODEL 8862927 ncrna LOC102004486 uncharacterized LOC102004486 NW_004955485 7084159 7094302 - 102004486 AGCD01058634;GBBH01225878;XR_001231087;XR_001231088;XR_263915 MODEL 9063230 protein-coding Cacfd1 calcium channel flower domain containing 1 INVOLVED IN endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955513 2787098 2796132 + 102018630 AGCD01066890;GBBH01214050;XM_005408450;XM_005408451 XP_005408507;XP_005408508 MODEL 8963093 protein-coding Itprid2 ITPR interacting domain containing 2 ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955403 15386116 15421284 - 102029693 AGCD01002044;GBDF01050320;GBDJ01138296;XM_005373880 XP_005373937 MODEL 8893826 protein-coding Ankrd13a ankyrin repeat domain 13A ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of protein localization to endosome (ortholog); negative regulation of receptor internalization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); late endosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955455 8576406 8610878 - 102014417 AGCD01045903;GBDK01182644;XM_005396429;XM_005396430 XP_005396486;XP_005396487 MODEL 8838681 protein-coding Erf ETS2 repressor factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chorio-allantoic fusion (ortholog); ectodermal cell differentiation (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Anorectal Malformations (ortholog); Arnold-Chiari Malformation (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955555 654945 661097 + 102027684 AGCD01073042;GBBH01090836;GBCE01095401;XM_005412381;XM_005412382;XM_013508752 XP_005412438;XP_005412439;XP_013364206 MODEL 8742967 protein-coding Adam12 ADAM metallopeptidase domain 12 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955477 3917637 4263529 - 102011866 AGCD01055577;AGCD01055578;AGCD01055579;AGCD01055580;AGCD01055581;GBCE01119464;GBCQ01016280;XM_005402080 XP_005402137 MODEL 9028732 protein-coding Cfap97d1 CFAP97 domain containing 1 INVOLVED IN sperm axoneme assembly (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 17072403 17077642 + 102006197 AGCD01043717;GBDF01007435;XM_005394509 XP_005394566 MODEL 8938810 protein-coding Ccpg1 cell cycle progression 1 INVOLVED IN positive regulation of cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN membrane (ortholog) NW_004955409 530734 562577 + 102011089 AGCD01009154;AGCD01009155;GBBH01062053;XM_013510264 XP_013365718 MODEL 8740324 pseudo LOC102006984 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955458 70428 74229 + 102006984 AGCD01047106;XM_005397126 MODEL 39133904 misc_rna 7SK 7SK RNA 8762838 protein-coding Casc3 CASC3 exon junction complex subunit ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN intracellular mRNA localization (ortholog); mRNA splicing, via spliceosome (ortholog); regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); exon-exon junction complex (ortholog); nuclear membrane (ortholog) NW_004955451 14784915 14804191 + 102010761 AGCD01043573;XM_005394350;XM_005394351 XP_005394407;XP_005394408 MODEL 8867495 protein-coding Gpsm2 G protein signaling modulator 2 ENCODES a protein that exhibits dynein complex binding (ortholog); G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); establishment of mitotic spindle orientation (ortholog); maintenance of centrosome location (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness (ortholog); cardiovascular system disease (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955435 12334462 12387262 + 102020701 AGCD01033144;AGCD01033145;AGCD01033146;AGCD01033147;GBDF01043863;XM_013516518 XP_013371972 MODEL 8865702 ncrna LOC102012752 uncharacterized LOC102012752 NW_004955469 10486414 10491430 - 102012752 AGCD01052535;GBCE01044034;XR_263446 MODEL 8993522 protein-coding Lim2 lens intrinsic membrane protein 2 INVOLVED IN camera-type eye development (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); cataract (ortholog); cataract 19 multiple types (ortholog); FOUND IN vesicle (ortholog) NW_004955558 1019709 1024375 + 102012809 AGCD01073411;GBDK01111107;XM_013508909 XP_013364363 MODEL 8809183 protein-coding Eml2 EMAP like 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); regulation of microtubule nucleation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitotic spindle (ortholog) NW_004955574 106788 135289 - 102014957 AGCD01075084;AGCD01075085;GBDF01043668;XM_005413789 XP_005413846 MODEL 8997979 ncrna LOC102010354 uncharacterized LOC102010354 NW_004955468 803292 804816 + 102010354 AGCD01051739;GBDF01089481;XR_263369 MODEL 9016598 protein-coding Apip APAF1 interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); methylthioribulose 1-phosphate dehydratase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN L-methionine cycle (ortholog); negative regulation of apoptotic process (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 11405721 11426700 + 102013838 AGCD01022755;GBCQ01094751;XM_005384139 XP_005384196 MODEL 8708397 protein-coding Coil coilin ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hereditary breast ovarian cancer syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cajal body (ortholog); female germ cell nucleus (ortholog); fibrillar center (ortholog) NW_004955451 5884233 5898525 + 102012267 AGCD01043185;AGCD01043186;GBDF01007401;XM_005394065;XM_005394066 XP_005394122;XP_005394123 MODEL 39132030 rrna 5S_rRNA 5S ribosomal RNA 8893523 pseudo LOC102005551 40S ribosomal protein S3a-like NW_004955451 2638931 2646792 + 102005551 AGCD01043017 MODEL 8731356 protein-coding Gcsh glycine cleavage system protein H ENCODES a protein that exhibits aminomethyltransferase activity (ortholog); enzyme binding (ortholog); INVOLVED IN glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955522 3858156 3869730 - 102007584 AGCD01068401;AGCD01068402;GBCE01077313;GBDJ01228720;XM_013507109 XP_013362563 MODEL 8719403 protein-coding Adtrp androgen dependent TFPI regulating protein ENCODES a protein that exhibits FAHFA hydrolase activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955465 2721171 2823368 + 102017207 AGCD01050361;AGCD01050362;GBDK01307017;XM_005398822;XM_005398823;XM_013521868;XM_013521869;XM_013521870 XP_005398879;XP_005398880;XP_013377322;XP_013377323;XP_013377324 MODEL 8792043 protein-coding Kcnip1 potassium voltage-gated channel interacting protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); potassium channel regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of action potential (ortholog); regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); Idiopathic Generalized Epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); dendrite (ortholog) NW_004955408 23299192 23662395 + 102016786 AGCD01008588;AGCD01008589;GBDJ01062789;XM_005376316;XM_005376317;XM_005376318 XP_005376373;XP_005376374;XP_005376375 MODEL 8873618 pseudo LOC102008491 60S ribosomal protein L24 pseudogene NW_004955403 25635577 25636027 + 102008491 AGCD01002291 MODEL 9037413 pseudo LOC102003782 solute carrier organic anion transporter family member 4C1 pseudogene NW_004955496 8201732 8203098 - 102003782 AGCD01062392 MODEL 10354886 ncrna LOC106149928 uncharacterized LOC106149928 NW_004955457 12921287 12930631 + 106149928 AGCD01047033;XR_001236411 MODEL 9042449 protein-coding LOC102011137 olfactory receptor 4D11-like NW_004955511 4022531 4023466 + 102011137 AGCD01066488;XM_013506353 XP_013361807 MODEL 8828732 pseudo LOC102009232 phosphorylated adapter RNA export protein pseudogene NW_004955444 566028 567654 + 102009232 AGCD01038678 MODEL 8722860 protein-coding Atp5mj ATP synthase membrane subunit j ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955538 2654283 2658610 - 102018979 AGCD01071134;AGCD01071135;GBCQ01008230;XM_005410814;XM_005410815;XM_005410816 XP_005410871;XP_005410872;XP_005410873 MODEL 8734119 protein-coding Il23a interleukin 23 subunit alpha ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-23 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); defense response to Gram-negative bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Amebic Liver Abscess (ortholog); Animal Toxoplasmosis (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); interleukin-23 complex (ortholog); interleukin-23 receptor complex (ortholog) NW_004955458 3946964 3949180 + 102008189 AGCD01047355;GBDF01073810;XM_005397309 XP_005397366 MODEL 8742332 pseudo LOC102017637 RNA-binding protein 39 pseudogene NW_004955409 3013441 3014560 + 102017637 AGCD01009233 MODEL 8838790 protein-coding Ccdc190 coiled-coil domain containing 190 NW_004955462 13524706 13532251 + 102010040 AGCD01049427;GBDF01251289;XM_005398262;XM_005398263;XM_005398264;XM_005398265;XM_005398266;XM_005398267 XP_005398319;XP_005398320;XP_005398321;XP_005398322;XP_005398323;XP_005398324 MODEL 9050349 protein-coding Hsd17b3 hydroxysteroid 17-beta dehydrogenase 3 ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); testosterone dehydrogenase (NAD+) activity (ortholog); testosterone dehydrogenase (NADP+) activity (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); cellular response to antibiotic (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; testosterone biosynthetic pathway; ASSOCIATED WITH 17-beta hydroxysteroid dehydrogenase 3 deficiency (ortholog); Alzheimer's disease (ortholog); disorder of sexual development (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955422 23104752 23251250 - 102007784 AGCD01023177;AGCD01023178;AGCD01023179;AGCD01023180;AGCD01023181;AGCD01023182;AGCD01023183;AGCD01023184;AGCD01023185;GBDF01190051;XM_005384688;XM_005384689 XP_005384745;XP_005384746 MODEL 8792474 protein-coding Cibar2 CBY1 interacting BAR domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Crohn's disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955541 478437 486171 - 102016748 AGCD01071352;GBDK01011302;XM_005410971;XM_013507964 XP_005411028;XP_013363418 MODEL 8785429 protein-coding Abra actin binding Rho activating protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); myofibril (ortholog); plasma membrane (ortholog) NW_004955417 29874234 29883648 - 102025358 AGCD01018611;GBDI01356628;XM_005381954 XP_005382011 MODEL 8831180 protein-coding Trim59 tripartite motif containing 59 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); host-mediated suppression of symbiont invasion (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955448 10962181 10971948 - 102004658 AGCD01041507;GBCQ01126672;XM_005393122;XM_005393123;XM_013518598 XP_005393179;XP_005393180;XP_013374052 MODEL 8951786 protein-coding Dzip1 DAZ interacting zinc finger protein 1 ENCODES a protein that exhibits BBSome binding (ortholog); molecular adaptor activity (ortholog); protein sequestering activity (ortholog); INVOLVED IN ciliary basal body organization (ortholog); cilium assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant intellectual developmental disorder 61 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955404 14428026 14481106 + 102023426 AGCD01003509;GBCE01127362;XM_005374099 XP_005374156 MODEL 8976857 pseudo LOC102009597 mitochondrial fission factor-like NW_004955414 11395994 11396843 - 102009597 AGCD01015082 MODEL 9059246 pseudo LOC102008130 40S ribosomal protein S15a pseudogene NW_004955428 3708701 3774517 + 102008130 AGCD01027660;AGCD01027661 MODEL 8749769 protein-coding Ifitm10 interferon induced transmembrane protein 10 NW_004955422 13556968 13572010 - 102013624 AGCD01022835;GBCE01165385;XM_013514315;XM_013514316 XP_013369769;XP_013369770 MODEL 8922090 protein-coding LOC102004123 CMRF35-like molecule NW_004955553 1403860 1424555 - 102004123 AGCD01072881;XM_013508611 XP_013364065 MODEL 39134341 misc_rna 7SK 7SK RNA 39131836 rrna 5S_rRNA 5S ribosomal RNA 8978234 ncrna LOC102004490 uncharacterized LOC102004490 NW_004955421 23169752 23183018 + 102004490 AGCD01022173;GBDF01042502;XR_260816 MODEL 8873135 protein-coding Itprip inositol 1,4,5-trisphosphate receptor interacting protein ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); stomach cancer (ortholog); FOUND IN nuclear outer membrane (ortholog) NW_004955485 6335670 6360757 + 102022392 AGCD01058615;AGCD01058616;GBBH01026694;XM_005403774;XM_005403775;XM_005403776;XM_005403777;XM_005403778;XM_005403779;XM_013504062;XM_013504063;XM_013504064;XM_013504065;XM_013504066;XM_013504067;XR_263908 XP_005403831;XP_005403832;XP_005403833;XP_005403834;XP_005403835;XP_005403836;XP_013359516;XP_013359517;XP_013359518;XP_013359519;XP_013359520;XP_013359521 MODEL 9011920 protein-coding Brwd3 bromodomain and WD repeat domain containing 3 ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); asthma (ortholog) NW_004955529 834459 992259 - 102018130 AGCD01069659;AGCD01069660;AGCD01069661;AGCD01069662;AGCD01069663;AGCD01069664;GBDK01342474;XM_005410071 XP_005410128 MODEL 8847617 protein-coding Cfap99 cilia and flagella associated protein 99 NW_004955514 1451451 1490251 + 102023512 AGCD01067050;AGCD01067051;AGCD01067052;AGCD01067053;GBCE01032631;GBDK01283997;XM_005408729;XM_013506810 XP_005408786;XP_013362264 MODEL 8808056 protein-coding Ankrd13b ankyrin repeat domain 13B ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); late endosome (ortholog) NW_004955481 3644332 3662375 - 102009498 AGCD01056909;AGCD01056910;GBBH01223904;GBDJ01273703;XM_005402675 XP_005402732 MODEL 8817327 pseudo LOC102011539 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial pseudogene NW_004955477 3913414 3916387 - 102011539 AGCD01055577 MODEL 8879327 pseudo LOC102003785 translocation protein SEC62-like NW_004955426 65589 86951 + 102003785 AGCD01025993 MODEL 8912217 ncrna LOC102021735 uncharacterized LOC102021735 NW_004955408 6117602 6136953 + 102021735 AGCD01008164;GBDF01095616;XR_001232266 MODEL 39134039 misc_rna 7SK 7SK RNA 9017928 protein-coding Clock clock circadian regulator ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN chromatoid body (ortholog); chromosome (ortholog); CLOCK-BMAL transcription complex (ortholog) NW_004955447 15394496 15537969 + 102005090 AGCD01041053;AGCD01041054;AGCD01041055;AGCD01041056;AGCD01041057;AGCD01041058;GBDI01055718;XM_005392886;XM_005392887;XM_005392888;XM_005392889;XM_005392890;XM_005392891;XM_005392892;XM_013518507;XM_013518509;XM_013518510;XM_013518511;XM_013518512 XP_005392943;XP_005392944;XP_005392945;XP_005392946;XP_005392947;XP_005392948;XP_005392949;XP_013373961;XP_013373963;XP_013373964;XP_013373965;XP_013373966 MODEL 8791144 protein-coding LOC102012754 olfactory receptor 2D3-like NW_004955414 22588215 22589156 - 102012754 AGCD01015464;XM_005380509 XP_005380566 MODEL 8725557 protein-coding Eml3 EMAP like 3 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); midbody (ortholog) NW_004955599 580203 587268 + 102015584 AGCD01076660;GBCE01002611;XM_013510059;XM_013510060 XP_013365513;XP_013365514 MODEL 8843210 protein-coding Lima1 LIM domain and actin binding 1 ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); microtubule stabilizing activity (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); brush border (ortholog) NW_004955547 730152 827644 - 102015666 AGCD01072174;AGCD01072175;AGCD01072176;AGCD01072177;AGCD01072178;AGCD01072179;AGCD01072180;AGCD01072181;GBDK01135743;XM_013508484;XM_013508485;XM_013508486;XM_013508487;XM_013508488;XM_013508489 XP_013363938;XP_013363939;XP_013363940;XP_013363941;XP_013363942;XP_013363943 MODEL 9019323 protein-coding Ccdc191 coiled-coil domain containing 191 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955427 14060863 14138850 - 102007791 AGCD01027266;AGCD01027267;GBBH01198044;XM_005386409 XP_005386466 MODEL 39133753 misc_rna 7SK 7SK RNA 8719603 protein-coding Cdc7 cell division cycle 7 ENCODES a protein that exhibits kinase activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cell cycle phase transition (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Dbf4-dependent protein kinase complex (ortholog); intercellular bridge (ortholog) NW_004955423 2902352 2923743 - 102027995 AGCD01023492;AGCD01023493;GBCE01072842;XM_005385064;XM_005385065 XP_005385121;XP_005385122 MODEL 8752015 protein-coding Cachd1 cache domain containing 1 ENCODES a protein that exhibits channel activator activity (ortholog); INVOLVED IN neurogenesis (ortholog); positive regulation of protein localization to cell surface (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955423 25675396 25818924 - 102026993 AGCD01024083;AGCD01024084;AGCD01024085;GBBH01163494;XM_013514449;XM_013514450;XM_013514451 XP_013369903;XP_013369904;XP_013369905 MODEL 9050498 protein-coding Abracl ABRA C-terminal like ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955436 20634128 20645609 - 102013756 AGCD01034032;AGCD01034033;AGCD01034034;GBBH01207589;XM_005389264 XP_005389321 MODEL 8789734 pseudo LOC102005556 ATP-binding cassette sub-family F member 2 pseudogene NW_004955406 13707389 13709243 + 102005556 AGCD01005949 MODEL 8845562 protein-coding Trim6 tripartite motif containing 6 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-beta (ortholog); cellular response to virus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955414 21495593 21513703 + 102008616 AGCD01015422;GBDF01054312;XM_005380095;XM_013511994;XM_013511995;XM_013511997;XM_013511998;XM_013511999 XP_005380152;XP_013367448;XP_013367449;XP_013367451;XP_013367452;XP_013367453 MODEL 8922426 ncrna LOC102004127 uncharacterized LOC102004127 NW_004955444 9443882 9445901 - 102004127 AGCD01038970;XR_262255 MODEL 8740331 ncrna LOC102006991 uncharacterized LOC102006991 NW_004955463 9497759 9499164 + 102006991 AGCD01049785;XR_263164 MODEL 8708647 protein-coding Gda guanine deaminase ENCODES a protein that exhibits guanine deaminase activity (ortholog); INVOLVED IN deoxyguanosine catabolic process (ortholog); dGMP catabolic process (ortholog); GMP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cytosol (ortholog); postsynapse (ortholog); postsynaptic cytosol (ortholog) NW_004955434 983388 1050413 - 102019310 AGCD01032047;AGCD01032048;AGCD01032049;AGCD01032050;GBBH01187473;GBCB01101187;XM_005388518 XP_005388575 MODEL 8941679 protein-coding Kcnip2 potassium voltage-gated channel interacting protein 2 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN action potential (ortholog); clustering of voltage-gated potassium channels (ortholog); membrane repolarization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); Kv4.2-KChIP2 channel complex (ortholog) NW_004955485 8468117 8472220 + 102016714 AGCD01058714;AGCD01058715;GBCE01097783;GBDF01003714;XM_013504088 XP_013359542 MODEL 8761541 protein-coding Adam15 ADAM metallopeptidase domain 15 ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); integrin binding (ortholog); metallopeptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cardiac epithelial to mesenchymal transition (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH Brain Hypoxia (ortholog); COVID-19 (ortholog); osteoarthritis (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog) NW_004955545 1545532 1555826 + 102018984 AGCD01071859;GBCE01135021;XM_005411543;XM_005411548;XM_005411549;XM_005411553;XM_005411555;XM_013508296;XM_013508297;XM_013508298;XR_001232186;XR_001232187;XR_001232188;XR_264868 XP_005411600;XP_005411605;XP_005411606;XP_005411610;XP_005411612;XP_013363750;XP_013363751;XP_013363752 MODEL 8823160 protein-coding Dhx16 DEAH-box helicase 16 ENCODES a protein that exhibits molecular adaptor activity (ortholog); pattern recognition receptor activity (ortholog); ubiquitin binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955583 657425 668390 - 102004765 AGCD01075846;AGCD01075847;GBBH01061492;GBCB01038131;XM_013509799 XP_013365253 MODEL 8835181 protein-coding Cenpb centromere protein B ASSOCIATED WITH inner ear disease (ortholog); primary biliary cholangitis (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955415 14626154 14628749 - 102005800 AGCD01016301;GBBH01060400;GBCQ01041208;XM_005381132 XP_005381189 MODEL 8873421 protein-coding Aldh1b1 aldehyde dehydrogenase 1 family member B1 ENCODES a protein that exhibits acetaldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); benzaldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN ethanol catabolic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; ASSOCIATED WITH cervical cancer (ortholog); cholestasis (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955419 28155174 28159752 - 102027529 AGCD01020460;GBBH01110885;XM_005382856 XP_005382913 MODEL 8832452 protein-coding Il23r interleukin 23 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-12 receptor binding (ortholog); interleukin-23 binding (ortholog); INVOLVED IN interleukin-23-mediated signaling pathway (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of defense response to virus by host (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); anxiety disorder (ortholog); arthritis (ortholog); FOUND IN cell surface (ortholog); interleukin-23 receptor complex (ortholog); plasma membrane (ortholog) NW_004955423 23841342 23885191 - 102016288 AGCD01024020;AGCD01024021;GBBH01099037;XM_005385277 XP_005385334 MODEL 8766192 protein-coding Atp5mk ATP synthase membrane subunit k ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 6 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955485 7152421 7159211 + 102005938 AGCD01058637;AGCD01058638;GBDJ01025859;XM_005403807;XM_005403808;XM_005403809 XP_005403864;XP_005403865;XP_005403866 MODEL 8813610 protein-coding Ehd4 EH domain containing 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to growth factor stimulus (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN adherens junction (ortholog); early endosome membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955416 8686709 8758096 - 102016380 AGCD01017065;AGCD01017066;GBCQ01006474;GBDJ01135715;XM_005381320 XP_005381377 MODEL 9010870 protein-coding LOC102006598 olfactory receptor 5B2-like NW_004955511 3228174 3232952 - 102006598 AGCD01066450;XM_013506387 XP_013361841 MODEL 8805324 pseudo LOC102021737 eukaryotic initiation factor 4A-I-like NW_004955408 16045127 16045682 + 102021737 AGCD01008432 MODEL 8925769 protein-coding Aplf aprataxin and PNKP like factor ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; histone modification pathway; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955424 16338546 16449074 - 102021145 AGCD01024739;AGCD01024740;AGCD01024741;GBDI01026589;XM_005385664;XM_013514727;XM_013514728;XM_013514729;XM_013514730;XM_013514732 XP_005385721;XP_013370181;XP_013370182;XP_013370183;XP_013370184;XP_013370186 MODEL 8769489 protein-coding Col10a1 collagen type X alpha 1 chain INVOLVED IN bone development (ortholog); cartilage development (ortholog); endochondral ossification (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH degenerative disc disease (ortholog); lung adenocarcinoma (ortholog); lung metastasis (ortholog); FOUND IN cell cortex (ortholog); collagen trimer (ortholog); collagen type X trimer (ortholog) NW_004955526 641577 679295 + 102029436 AGCD01069246;GBCE01113355;XM_005409753;XM_013507369 XP_005409810;XP_013362823 MODEL 8943358 protein-coding Fbxo41 F-box protein 41 INVOLVED IN cerebellum development (ortholog); chemical synaptic transmission (ortholog); dentate gyrus development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955424 12339588 12378116 + 102016290 AGCD01024604;XM_005385563;XM_005385564;XM_005385565;XM_005385566;XM_013514580 XP_005385620;XP_005385621;XP_005385622;XP_005385623;XP_013370034 MODEL 8838154 protein-coding Dzip1l DAZ interacting zinc finger protein 1 like INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); floor plate development (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); ciliary basal body (ortholog) NW_004955501 895245 965626 + 102011681 AGCD01064043;GBDI01220148;XM_005406770;XM_005406772;XM_013505765;XM_013505766;XM_013505767;XM_013505768;XM_013505769;XM_013505770;XM_013505771;XM_013505772;XM_013505773;XM_013505774;XM_013505775;XM_013505776;XM_013505777;XM_013505778;XM_013505779;XM_013505780 XP_005406827;XP_005406829;XP_013361219;XP_013361220;XP_013361221;XP_013361222;XP_013361223;XP_013361224;XP_013361225;XP_013361226;XP_013361227;XP_013361228;XP_013361229;XP_013361230;XP_013361231;XP_013361232;XP_013361233;XP_013361234 MODEL 39133905 misc_rna 7SK 7SK RNA 39134342 misc_rna 7SK 7SK RNA 9033386 protein-coding Ccr10 C-C motif chemokine receptor 10 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH status epilepticus (ortholog); FOUND IN cell surface (ortholog) NW_004955451 16533784 16535692 - 102021935 AGCD01043689;GBCB01034185;XM_005394471 XP_005394528 MODEL 9027124 protein-coding LOC102004491 olfactory receptor 2A5 NW_004955491 387723 388640 + 102004491 AGCD01060331;XM_005404723 XP_005404780 MODEL 8716170 pseudo LOC102011138 mitochondrial calcium uniporter regulator 1 pseudogene NW_004955430 1898687 1900786 - 102011138 AGCD01029142 MODEL 8910558 protein-coding Gpsm3 G protein signaling modulator 3 INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of leukocyte chemotaxis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lymphoma (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 654475 656335 - 102016634 AGCD01034153;GBDJ01190051;XM_005389440 XP_005389497 MODEL 8746211 pseudo LOC102010355 protein tyrosine phosphatase type IVA 1 pseudogene NW_004955414 6560097 6560687 - 102010355 AGCD01014920;XM_005379741;XM_005379742;XM_005379743 MODEL 8702256 pseudo LOC102006994 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955412 10686073 10686348 + 102006994 AGCD01012776 MODEL 9060627 protein-coding Cfb complement factor B ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, alternative pathway (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); age related macular degeneration 14 (ortholog); anterior uveitis (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of Golgi membrane (ortholog); extracellular region (ortholog) NW_004955437 461235 466908 + 102005413 AGCD01034137;GBBH01002155;XM_005389399 XP_005389456 MODEL 8766008 protein-coding Cic capicua transcriptional repressor ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN brain development (ortholog); learning (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog) NW_004955555 613549 641587 - 102025847 AGCD01073039;AGCD01073040;GBCE01135171;XM_013508684;XM_013508685 XP_013364138;XP_013364139 MODEL 9062262 protein-coding Kcnip3 potassium voltage-gated channel interacting protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); intracellular protein transport (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasm (ortholog) NW_004955470 3545434 3613288 + 102012630 AGCD01052703;AGCD01052704;GBDF01144556;XM_005400645;XM_013522855;XM_013522856 XP_005400702;XP_013378309;XP_013378310 MODEL 10201666 ncrna LOC106149929 uncharacterized LOC106149929 NW_004955457 12855868 12856884 + 106149929 AGCD01047028;GBCB01050707;XR_001236412 MODEL 8917558 protein-coding Erfe erythroferrone ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of autophagy (ortholog); FOUND IN extracellular region (ortholog) NW_004955542 2408504 2415522 - 102016097 AGCD01071522;GBDF01279710;XM_013508015;XM_013508016 XP_013363469;XP_013363470 MODEL 8858964 protein-coding Ifitm5 interferon induced transmembrane protein 5 INVOLVED IN bone mineralization (ortholog); bone morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteogenesis imperfecta (ortholog); osteogenesis imperfecta type 5 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955476 11745585 11747006 + 102027177 AGCD01055474;GBCE01007175;XM_005401877 XP_005401934 MODEL 39131421 protein-coding CCDC195 coiled-coil domain containing 195 39133754 misc_rna 7SK 7SK RNA 9020705 ncrna LOC102008492 uncharacterized LOC102008492 NW_004955405 32452517 32475010 - 102008492 AGCD01005333;GBDJ01347641;XR_259420 MODEL 39131838 rrna 5S_rRNA 5S ribosomal RNA 8890021 protein-coding Cdc73 cell division cycle 73 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); endodermal cell fate commitment (ortholog); mRNA 3'-end processing (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); angioedema (ortholog); breast cancer (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 30533919 30665812 + 102021416 AGCD01006375;AGCD01006376;AGCD01006377;AGCD01006378;GBCQ01098672;GBDF01182228;XM_013521863 XP_013377317 MODEL 8866424 protein-coding Cacna1a calcium voltage-gated channel subunit alpha1 A ENCODES a protein that exhibits calmodulin binding (ortholog); high voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Alternating Hemiplegia of Childhood 1 (ortholog); FOUND IN dendrite; neuronal cell body; calyx of Held (ortholog) NW_004955415 32182536 32457511 - 102014559 AGCD01016714;AGCD01016715;AGCD01016716;AGCD01016717;AGCD01016718;AGCD01016719;AGCD01016720;AGCD01016721;GBDI01088844;GBDI01386674;XM_013512132 XP_013367586 MODEL 8993496 protein-coding Bscl2 BSCL2 lipid droplet biogenesis associated, seipin ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cytosolic lipolysis (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Asthenozoospermia (ortholog); autosomal dominant distal hereditary motor neuronopathy 13 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955599 505725 514225 + 102011605 AGCD01076654;GBDJ01021043;XM_013510053;XM_013510054;XM_013510055;XM_013510056 XP_013365507;XP_013365508;XP_013365509;XP_013365510 MODEL 8947606 protein-coding Itpripl1 ITPRIP like 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN calcium ion import (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); prostate cancer (ortholog); stomach cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955470 3870296 3873212 + 102016466 AGCD01052712;GBDF01005329;XM_005400657;XM_005400658;XM_013522858 XP_005400714;XP_005400715;XP_013378312 MODEL 8859584 ncrna LOC102017639 uncharacterized LOC102017639 NW_004955410 16877529 16903847 - 102017639 AGCD01010974;GBDF01000533;XR_001232696;XR_259842 MODEL 8814934 protein-coding Trim62 tripartite motif containing 62 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); positive regulation of antifungal innate immune response (ortholog); FOUND IN cytoplasm (ortholog) NW_004955452 11348001 11377413 - 102006865 AGCD01044335;GBCB01025292;XM_005395108 XP_005395165 MODEL 39134040 misc_rna 7SK 7SK RNA 9042708 protein-coding Adam17 ADAM metallopeptidase domain 17 ENCODES a protein that exhibits cytokine binding (ortholog); endopeptidase activity (ortholog); integrin binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); B cell differentiation (ortholog); cell adhesion (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); atopic dermatitis (ortholog); FOUND IN actin cytoskeleton (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955487 5180241 5218298 - 102024344 AGCD01059322;GBDK01129567;XM_005404397;XM_013504340;XM_013504341 XP_005404454;XP_013359794;XP_013359795 MODEL 8918194 protein-coding Cenpc centromere protein C ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN chromosome segregation (ortholog); kinetochore assembly (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); CREST syndrome (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) NW_004955447 5345617 5406889 + 102013025 AGCD01040751;AGCD01040752;AGCD01040753;GBDF01048245;XM_005392837 XP_005392894 MODEL 8840654 pseudo LOC102008132 40S ribosomal protein S15 pseudogene NW_004955429 10102174 10102807 + 102008132 AGCD01028666 MODEL 8814255 protein-coding LOC102009604 laforin NW_004955477 658249 660233 - 102009604 AGCD01055492;AGCD01055493;GBDJ01162178;XM_005402077 XP_005402134 MODEL 8832602 protein-coding Il24 interleukin 24 INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); negative regulation of cell migration (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Lung Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955406 42431845 42437392 + 102023328 AGCD01006707;XM_013502798;XM_013502800;XM_013502801 XP_013358252;XP_013358254;XP_013358255 MODEL 8782150 protein-coding Casd1 CAS1 domain sialic acid O acetyltransferase 1 ENCODES a protein that exhibits N-acetylneuraminate 9-O-acetyltransferase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955432 11236403 11277462 + 102012793 AGCD01030945;GBBH01187265;XM_005388043 XP_005388100 MODEL 8992767 protein-coding Eml4 EMAP like 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); mitotic metaphase chromosome alignment (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intercellular bridge (ortholog) NW_004955441 9633906 9715866 + 102021802 AGCD01037026;GBDI01081618;XM_013517609;XM_013517610;XR_001235328 XP_013373063;XP_013373064 MODEL 8821186 protein-coding Limch1 LIM and calponin homology domains 1 ENCODES a protein that exhibits myosin II head/neck binding (ortholog); INVOLVED IN cytoplasmic actin-based contraction involved in cell motility (ortholog); negative regulation of cell migration (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); myosin II complex (ortholog); stress fiber (ortholog) NW_004955443 5984027 6305014 - 102011054 AGCD01038245;AGCD01038246;AGCD01038247;AGCD01038248;AGCD01038249;GBCB01002554;GBDK01003882;XM_005391928;XM_005391930;XM_013518053 XP_005391985;XP_005391987;XP_013373507 MODEL 8887770 protein-coding Kcnip4 potassium voltage-gated channel interacting protein 4 ENCODES a protein that exhibits calcium ion binding (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955480 2803374 3911081 + 102028296 AGCD01056622;AGCD01056623;AGCD01056624;AGCD01056625;AGCD01056626;AGCD01056627;AGCD01056628;AGCD01056629;AGCD01056630;AGCD01056631;GBDJ01368252;XM_005402468;XM_005402469;XM_005402470;XM_005402471;XM_005402472 XP_005402525;XP_005402526;XP_005402527;XP_005402528;XP_005402529 MODEL 8983663 ncrna LOC102004128 uncharacterized LOC102004128 NW_004955563 205695 206242 - 102004128 AGCD01074053;XR_265014 MODEL 39133906 misc_rna 7SK 7SK RNA 8700554 pseudo LOC102011543 DCN1-like protein 1 pseudogene NW_004955484 8471459 8472600 - 102011543 AGCD01058384 MODEL 39132031 rrna 5S_rRNA 5S ribosomal RNA 8986462 protein-coding Gdap1 ganglioside induced differentiation associated protein 1 INVOLVED IN cellular response to vitamin D (ortholog); mitochondrial fission (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH autosomal recessive axonal Charcot-Marie-Tooth disease with vocal cord paresis (ortholog); brachydactyly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955444 6053422 6069741 - 102018866 AGCD01038847;AGCD01038848;GBDJ01314137;XM_005392075 XP_005392132 MODEL 8845405 protein-coding Ccr2 C-C motif chemokine receptor 2 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); CCR2 chemokine receptor binding (ortholog); chemokine (C-C motif) ligand 12 binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cellular defense response (ortholog); cellular homeostasis (ortholog); ASSOCIATED WITH age related macular degeneration (ortholog); aggressive periodontitis (ortholog); allergic bronchopulmonary aspergillosis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); external side of plasma membrane (ortholog) NW_004955420 25641184 25664413 - 102027987 AGCD01021367;GBDI01357587;XM_005383449;XM_005383450;XM_005383451;XM_005383452;XM_013513476 XP_005383506;XP_005383507;XP_005383508;XP_005383509;XP_013368930 MODEL 9043964 protein-coding Dhx29 DExH-box helicase 29 ENCODES a protein that exhibits ribonucleoside triphosphate phosphatase activity (ortholog); ribosomal small subunit binding (ortholog); translation activator activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); ribosome assembly (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); Cardiac Arrhythmias (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytosolic small ribosomal subunit (ortholog); eukaryotic 43S preinitiation complex (ortholog) NW_004955446 12362324 12412814 + 102017176 AGCD01040230;GBDF01189845;XM_005392696;XM_005392697 XP_005392753;XP_005392754 MODEL 8842380 protein-coding Gpt glutamic--pyruvic transaminase ENCODES a protein that exhibits L-alanine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); L-alanine catabolic process (ortholog); positive regulation of gluconeogenesis (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; alanine metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Bone Fractures (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog) NW_004955454 3127997 3132459 + 102009143 AGCD01045057;GBDK01138966;XM_005395897 XP_005395954 MODEL 9015858 protein-coding Aebp1 AE binding protein 1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); collagen binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of collagen fibril organization (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955456 7860191 7868526 - 102022163 AGCD01046435;GBBH01031727;XM_005396673 XP_005396730 MODEL 8817216 pseudo LOC102006599 protein kinase C iota type-like NW_004955430 12745518 12748115 - 102006599 AGCD01029509;AGCD01029510 MODEL 8857631 protein-coding Ehf ETS homologous factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN endothelial tube formation (ortholog); epithelial cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); asthma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 11599245 11640828 - 102014792 AGCD01022763;GBCQ01062677;XM_013514292;XM_013514293 XP_013369746;XP_013369747 MODEL 8960870 protein-coding LOC102021740 olfactory receptor 49-like NW_004955409 37585637 37645425 - 102021740 AGCD01010530;AGCD01010531;AGCD01010532;AGCD01010533;XM_005377184 XP_005377241 MODEL 8977355 protein-coding Fbxo42 F-box protein 42 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955527 1967232 2049524 + 102029787 AGCD01069420;AGCD01069421;GBDF01160524;XM_005409838;XM_005409839;XM_005409840;XM_005409841;XM_013507387 XP_005409895;XP_005409896;XP_005409897;XP_005409898;XP_013362841 MODEL 8950715 protein-coding LOC102009234 prolactin-like NW_004955576 435369 491017 + 102009234 AGCD01075276;AGCD01075277;AGCD01075278;AGCD01075279;AGCD01075280;AGCD01075281;AGCD01075282;AGCD01075283;XM_005413946 XP_005414003 MODEL 8957169 protein-coding LOC102008496 glutathione S-transferase theta-1 NW_004955455 8324748 8336051 - 102008496 AGCD01045886;AGCD01045887;GBDI01296088;XM_005396409 XP_005396466 MODEL 39134343 misc_rna 7SK 7SK RNA 8976681 ncrna LOC102003787 uncharacterized LOC102003787 NW_004955505 1073276 1075559 - 102003787 AGCD01064967;GBDF01042900;XR_264300 MODEL 8986391 protein-coding Dzip3 DAZ interacting zinc finger protein 3 ENCODES a protein that exhibits phosphatase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); RNA binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955427 9481196 9571483 + 102017260 AGCD01027101;AGCD01027102;GBCQ01179483;XM_005386361;XM_013515123;XM_013515124;XM_013515125;XM_013515126;XM_013515127;XR_001234381 XP_005386418;XP_013370577;XP_013370578;XP_013370579;XP_013370580;XP_013370581 MODEL 8817832 protein-coding Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 ENCODES a protein that exhibits (3R)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); 17-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar hypoplasia (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955408 39041028 39136867 + 102004246 AGCD01009059;AGCD01009060;AGCD01009061;AGCD01009062;AGCD01009063;GBDF01162423;XM_005376550 XP_005376607 MODEL 8769645 pseudo LOC102011140 thioredoxin pseudogene NW_004955512 2762023 2762354 - 102011140 AGCD01066685 MODEL 8878773 protein-coding LOC102012761 peroxisomal bifunctional enzyme-like NW_004955420 22249148 22292098 + 102012761 AGCD01021191;AGCD01021192;AGCD01021193;GBBH01217378;XM_005383300 XP_005383357 MODEL 8836376 protein-coding Cfd complement factor D ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, alternative pathway (ortholog); Notch signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); arthus reaction (ortholog); asbestosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 6955612 6961317 - 102016395 AGCD01062104;AGCD01062105;GBDI01121981;XM_005406171 XP_005406228 MODEL 8897736 ncrna LOC102007002 uncharacterized LOC102007002 NW_004955470 2465067 2474365 - 102007002 AGCD01052678;GBDF01193194;XR_001237015;XR_001237016 MODEL 9005752 protein-coding Clp1 cleavage factor polyribonucleotide kinase subunit 1 ENCODES a protein that exhibits ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity (ortholog); INVOLVED IN cerebellar cortex development (ortholog); regulation of mRNA 3'-end processing (ortholog); RISC complex assembly (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; tRNA maturation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN mRNA cleavage factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955511 2588825 2592108 + 102020149 AGCD01066418;GBDF01051886;XM_005408004;XM_005408005;XM_005408006;XM_013506485;XM_013506486 XP_005408061;XP_005408062;XP_005408063;XP_013361939;XP_013361940 MODEL 39134041 misc_rna 7SK 7SK RNA 9005163 protein-coding Atp5pb ATP synthase peripheral stalk-membrane subunit b ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); substantia nigra development (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955435 14940502 14952423 + 102027334 AGCD01033258;GBDJ01003480;XM_005388950 XP_005389007 MODEL 8727717 protein-coding Aldh1l1 aldehyde dehydrogenase 1 family member L1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NADP+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); folic acid metabolic process (ortholog); NADPH regeneration (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cholestasis (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955421 21420264 21506004 - 102018736 AGCD01022109;AGCD01022110;AGCD01022111;GBDJ01084830;XM_005383830 XP_005383887 MODEL 8745531 protein-coding Cidea cell death inducing DFFA like effector a ENCODES a protein that exhibits lipid transfer activity (ortholog); phosphatidic acid binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cold (ortholog); fat cell differentiation (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); congestive heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); mitochondrial envelope (ortholog) NW_004955402 1090372 1096621 - 102011492 AGCD01000047;GBCB01087694;GBDI01064477;XM_005373138 XP_005373195 MODEL 8724032 protein-coding Apln apelin ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); drinking behavior (ortholog); PARTICIPATES IN apelin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Cardiomegaly (ortholog); FOUND IN extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955473 5346822 5356359 + 102013713 AGCD01053974;GBDK01240998;XM_005401260;XM_005401261 XP_005401317;XP_005401318 MODEL 9033050 protein-coding Cenpe centromere protein E ENCODES a protein that exhibits kinetochore binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); attachment of spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955496 5468759 5514915 + 102012001 AGCD01062355;GBDJ01258207;XM_013505426;XM_013505427;XM_013505428;XM_013505429 XP_013360880;XP_013360881;XP_013360882;XP_013360883 MODEL 8979090 protein-coding LOC102005559 FUN14 domain-containing protein 1-like NW_004955406 23472527 23473294 - 102005559 AGCD01006171;GBDF01050560;XM_005375060 XP_005375117 MODEL 8763655 protein-coding Aebp2 AE binding protein 2 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Hirschsprung's disease (ortholog); FOUND IN ESC/E(Z) complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 15514247 15561233 + 102012943 AGCD01014077;GBCQ01155053;GBDF01196223;XM_005379044 XP_005379101 MODEL 8753643 protein-coding Ifnar1 interferon alpha and beta receptor subunit 1 ENCODES a protein that exhibits cytokine binding (ortholog); interferon receptor activity (ortholog); JAK pathway signal transduction adaptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN type I interferon signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bacterial pneumonia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog); plasma membrane (ortholog) NW_004955407 32730973 32755404 + 102019983 AGCD01007680;GBDK01189202;XM_013504266;XM_013504267;XM_013504269 XP_013359720;XP_013359721;XP_013359723 MODEL 8960550 protein-coding Eml5 EMAP like 5 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955438 11225910 11366996 - 102010307 AGCD01035231;AGCD01035232;AGCD01035233;AGCD01035234;AGCD01035235;GBBH01176854;GBDK01223254;XM_013517167 XP_013372621 MODEL 8804945 protein-coding Col11a1 collagen type XI alpha 1 chain ENCODES a protein that exhibits heparan sulfate binding (ortholog); heparin binding (ortholog); INVOLVED IN cartilage condensation (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN collagen trimer (ortholog); collagen type XI trimer (ortholog); endoplasmic reticulum (ortholog) NW_004955435 7352617 7545235 - 102011236 AGCD01032954;AGCD01032955;AGCD01032956;AGCD01032957;AGCD01032958;AGCD01032959;GBDK01058523;XM_013516403 XP_013371857 MODEL 39131839 rrna 5S_rRNA 5S ribosomal RNA 8759402 protein-coding Cask calcium/calmodulin dependent serine protein kinase ENCODES a protein that exhibits neurexin family protein binding (ortholog); PDZ domain binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN calcium ion import (ortholog); cerebral cortex development (ortholog); negative regulation of cell-matrix adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Acholinesterasemia (ortholog); acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN apical dendrite (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955565 879560 1242727 + 102027583 AGCD01074298;AGCD01074299;AGCD01074300;AGCD01074301;AGCD01074302;AGCD01074303;AGCD01074304;AGCD01074305;AGCD01074306;GBBH01193515;XM_005413251 XP_005413308 MODEL 8705437 protein-coding Cdca2 cell division cycle associated 2 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog) NW_004955403 48374276 48417130 + 102023316 AGCD01002918;AGCD01002919;AGCD01002920;GBDF01004693;XM_005373713;XM_005373714;XM_005373715;XM_013514099 XP_005373770;XP_005373771;XP_005373772;XP_013369553 MODEL 8776132 protein-coding Ankrd13c ankyrin repeat domain 13C ENCODES a protein that exhibits protein carrier activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); protein targeting to membrane (ortholog); regulation of anoikis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955423 21599563 21666343 + 102006929 AGCD01023945;AGCD01023946;GBBH01035257;GBDJ01001182;XM_005385250 XP_005385307 MODEL 8874220 protein-coding Erfl ETS repressor factor like NW_004955555 929984 941311 + 102008465 AGCD01073053;AGCD01073054;GBCE01120286;XM_005412413;XM_013508718 XP_005412470;XP_013364172 MODEL 8753866 protein-coding Abraxas1 abraxas 1, BRCA1 A complex subunit ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN double-strand break repair (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of DNA repair (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955474 6252321 6265518 + 102003759 AGCD01054464;AGCD01054465;AGCD01054466;GBDF01127847;GBDK01359129;XM_013502752 XP_013358206 MODEL 8743194 protein-coding Bsdc1 BSD domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955452 10694113 10723342 - 102021513 AGCD01044289;AGCD01044290;GBCQ01037702;XM_005395063 XP_005395120 MODEL 39133907 misc_rna 7SK 7SK RNA 8850081 protein-coding Cacna1b calcium voltage-gated channel subunit alpha1 B ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); protein phosphatase 2A binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); amblyopia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN basolateral plasma membrane; dendrite; neuron projection terminus NW_004955513 5654915 5823094 + 102019306 AGCD01066980;AGCD01066981;AGCD01066982;AGCD01066983;AGCD01066984;AGCD01066985;AGCD01066986;AGCD01066987;GBDF01025399;GBDF01152901;XM_013506726;XM_013506727;XM_013506728 XP_013362180;XP_013362181;XP_013362182 MODEL 9014031 ncrna LOC102017640 uncharacterized LOC102017640 NW_004955463 4830363 4852657 + 102017640 AGCD01049617;AGCD01049618;AGCD01049619;XR_263145;XR_263146 MODEL 8882655 protein-coding Itpripl2 ITPRIP like 2 ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog) NW_004955442 2981507 2987633 - 102004980 AGCD01037488;GBCB01099986;GBDI01180684;XM_005391095 XP_005391152 MODEL 9046343 protein-coding Ccr3 C-C motif chemokine receptor 3 ENCODES a protein that exhibits C-C chemokine binding (ortholog); C-C chemokine receptor activity (ortholog); INVOLVED IN angioblast cell migration (ortholog); cell chemotaxis (ortholog); chemokine-mediated signaling pathway (ortholog); ASSOCIATED WITH allergic conjunctivitis (ortholog); allergic contact dermatitis (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN endosome (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955420 25702917 25723269 - 102028974 AGCD01021368;AGCD01081642;XM_005383453;XM_013513482;XM_013513483;XM_013513484 XP_005383510;XP_013368936;XP_013368937;XP_013368938 MODEL 8752356 protein-coding Trim63 tripartite motif containing 63 ENCODES a protein that exhibits titin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); muscle contraction (ortholog); myotube cell development (ortholog); ASSOCIATED WITH Atrophy (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN contractile muscle fiber (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955452 5517969 5531490 - 102012601 AGCD01044038;AGCD01044039;GBDI01181650;XM_005394841 XP_005394898 MODEL 9045863 pseudo LOC102008136 ras-related protein Rab-8B pseudogene NW_004955431 13166481 13167496 - 102008136 AGCD01030286 MODEL 9019318 protein-coding LOC102006600 ATP-binding cassette sub-family G member 2-like NW_004955433 125610 276438 + 102006600 AGCD01031303;AGCD01031304;AGCD01031305;AGCD01031306;AGCD01031307;AGCD01031308;AGCD01031309;AGCD01031310;AGCD01031311;GBCE01134192;XM_013516145;XM_013516146;XM_013516147;XM_013516148;XM_013516149;XM_013516150;XM_013516151;XM_013516152;XM_013516153;XM_013516154;XM_013516155;XM_013516156;XM_013516157;XM_013516158;XM_013516159;XM_013516160;XM_013516161;XM_013516162;XR_001234729;XR_001234730;XR_001234731;XR_001234732 XP_013371599;XP_013371600;XP_013371601;XP_013371602;XP_013371603;XP_013371604;XP_013371605;XP_013371606;XP_013371607;XP_013371608;XP_013371609;XP_013371610;XP_013371611;XP_013371612;XP_013371613;XP_013371614;XP_013371615;XP_013371616 MODEL 9039668 protein-coding Dhx30 DExH-box helicase 30 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); chromatin binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN central nervous system development (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); ASSOCIATED WITH astigmatism (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) NW_004955420 24537608 24549771 - 102012330 AGCD01021315;GBCE01115003;GBCQ01129787;XM_013513378 XP_013368832 MODEL 8899767 protein-coding LOC102004494 testis-specific Y-encoded-like protein 5 NW_004955422 306038 309442 - 102004494 AGCD01022403;AGCD01022404;XM_005384934 XP_005384991 MODEL 8789681 pseudo LOC102004129 protein kinase C iota type pseudogene NW_004955446 7596366 7600065 + 102004129 AGCD01040126;XM_005392657 MODEL 8866976 protein-coding LOC102003791 olfactory receptor 5D18-like NW_004955511 564979 565959 - 102003791 AGCD01066333;XM_005408200 XP_005408257 MODEL 39132032 rrna 5S_rRNA 5S ribosomal RNA 8913371 ncrna LOC102011553 uncharacterized LOC102011553 NW_004955421 24665699 24694762 - 102011553 AGCD01022221;GBDF01076912;XR_260823 MODEL 8747822 protein-coding Gdap1l1 ganglioside induced differentiation associated protein 1 like 1 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955445 13045864 13097447 - 102021717 AGCD01039767;GBDF01053824;XM_005392484;XR_262333;XR_262334;XR_262336;XR_262337 XP_005392541 MODEL 8973382 protein-coding Adam18 ADAM metallopeptidase domain 18 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); lymphoma (ortholog) NW_004955536 3014457 3109257 - 102018976 AGCD01070806;AGCD01070807;AGCD01070808;AGCD01070809;GBDF01051796;XM_005410540;XM_013507734;XM_013507735;XM_013507736;XM_013507737;XM_013507738;XM_013507739;XM_013507740;XM_013507741;XM_013507742 XP_005410597;XP_013363188;XP_013363189;XP_013363190;XP_013363191;XP_013363192;XP_013363193;XP_013363194;XP_013363195;XP_013363196 MODEL 39133755 misc_rna 7SK 7SK RNA 39134042 misc_rna 7SK 7SK RNA 10190939 protein-coding LOC102010356 uncharacterized LOC102010356 NW_004955470 374789 391272 - 102010356 AGCD01052609;GBCE01002380;XM_013522686 XP_013378140 MODEL 8893043 protein-coding Cenpf centromere protein F ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); dynein complex binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chromosome segregation (ortholog); kidney development (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); chromosome, centromeric region (ortholog) NW_004955406 3225788 3273037 - 102011835 AGCD01005669;GBDF01121464;XM_005374718 XP_005374775 MODEL 8818554 protein-coding Limd1 LIM domain containing 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955420 26290792 26328637 - 102007438 AGCD01021398;AGCD01021399;AGCD01021400;GBBH01126814;GBCE01142249;XM_005383471 XP_005383528 MODEL 9056350 protein-coding Gpt2 glutamic--pyruvic transaminase 2 ENCODES a protein that exhibits L-alanine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); cellular response to insulin stimulus (ortholog); gluconeogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN extracellular region (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955474 8248622 8285449 - 102012189 AGCD01054547;AGCD01054548;GBBH01062376;GBDI01074545;XM_013502769 XP_013358223 MODEL 8749136 protein-coding Ehmt1 euchromatic histone lysine methyltransferase 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); histone H3K27 methyltransferase activity (ortholog); histone H3K9 dimethyltransferase activity (ortholog); INVOLVED IN beige fat cell differentiation (ortholog); brown fat cell differentiation (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acne (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nuclear body (ortholog) NW_004955513 5491446 5642559 + 102017487 AGCD01066974;AGCD01066975;AGCD01066976;AGCD01066977;AGCD01066978;AGCD01066979;GBDF01221034;XM_005408624;XM_005408625;XM_005408626;XM_005408627;XM_005408628;XM_005408629;XM_005408630;XM_005408631;XM_013506658 XP_005408681;XP_005408682;XP_005408683;XP_005408684;XP_005408685;XP_005408686;XP_005408687;XP_005408688;XP_013362112 MODEL 8990441 protein-coding Col11a2 collagen type XI alpha 2 chain INVOLVED IN cartilage development (ortholog); chondrocyte differentiation (ortholog); collagen fibril organization (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness 13 (ortholog); autosomal recessive nonsyndromic deafness 53 (ortholog); FOUND IN collagen trimer (ortholog) NW_004955437 1739426 1767087 - 102026793 AGCD01034232;AGCD01034233;GBCE01024903;XM_013517087;XM_013517089;XM_013517090;XM_013517091;XM_013517092;XM_013517093;XM_013517094 XP_013372541;XP_013372543;XP_013372544;XP_013372545;XP_013372546;XP_013372547;XP_013372548 MODEL 39134344 misc_rna 7SK 7SK RNA 8724600 protein-coding LOC102008498 interferon-induced GTP-binding protein Mx2-like NW_004955407 35275551 35296838 - 102008498 AGCD01007736;GBBH01139527;XM_005375727;XM_013504510 XP_005375784;XP_013359964 MODEL 8938207 protein-coding Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 ENCODES a protein that exhibits 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); 5-alpha-androstane-3-beta,17-beta-diol dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); brain development (ortholog); cell differentiation (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) NW_004955462 13555488 13574506 - 102011416 AGCD01049428;GBDI01065449;XM_005398268 XP_005398325 MODEL 8720848 protein-coding Cdca3 cell division cycle associated 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN adherens junction (ortholog) NW_004955413 4448711 4450917 - 102004048 AGCD01013615;GBDI01105802;XM_013511344 XP_013366798 MODEL 8857378 protein-coding E2f1 E2F transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anoikis (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear chromosome (ortholog) NW_004955422 27638625 27643261 + 102003151 AGCD01023330;GBDF01187864;XM_013513814 XP_013369268 MODEL 8842945 protein-coding Abraxas2 abraxas 2, BRISC complex subunit ENCODES a protein that exhibits microtubule binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); cellular response to freezing (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN BRISC complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955477 2782604 2811452 + 102005706 AGCD01055533;GBDF01277348;XM_005401983 XP_005402040 MODEL 9027751 ncrna LOC102012771 uncharacterized LOC102012771 NW_004955422 26067668 26092884 - 102012771 AGCD01023274;AGCD01023275;GBDI01368464;XR_260916 MODEL 8955692 ncrna LOC102009605 uncharacterized LOC102009605 NW_004955478 6496663 6507303 + 102009605 AGCD01055896;GBDF01194619;XR_001230836;XR_001230837;XR_001230838;XR_263699 MODEL 8754332 protein-coding Il25 interleukin 25 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN eosinophil differentiation (ortholog); inflammatory response (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH allergic asthma (ortholog); allergic rhinitis (ortholog); Amoebic Dysentery due to Entamoeba Histolytica (ortholog); FOUND IN extracellular region (ortholog) NW_004955409 36960902 36964038 - 102020773 AGCD01010484;XM_013510236 XP_013365690 MODEL 8867831 protein-coding Cideb cell death inducing DFFA like effector b ENCODES a protein that exhibits identical protein binding (ortholog); lipid transfer activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); COPII-coated vesicle cargo loading (ortholog); execution phase of apoptosis (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955409 35993853 35996935 + 102004249 AGCD01010438;GBCQ01012226;XM_005377019 XP_005377076 MODEL 8722772 protein-coding Aldh1l2 aldehyde dehydrogenase 1 family member L2 ENCODES a protein that exhibits formyltetrahydrofolate dehydrogenase activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); fatty acid beta-oxidation (ortholog); folic acid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrion (ortholog) NW_004955405 39387949 39437282 - 102015919 AGCD01005499;AGCD01005500;GBDI01245189;XM_005374604 XP_005374661 MODEL 8731544 protein-coding Aplnr apelin receptor ENCODES a protein that exhibits apelin receptor activity (ortholog); G protein-coupled peptide receptor activity (ortholog); mechanoreceptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult heart development (ortholog); aorta development (ortholog); PARTICIPATES IN apelin signaling pathway; ASSOCIATED WITH lung cancer (ortholog); pulmonary venoocclusive disease (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955511 2321445 2324417 - 102014698 AGCD01066398;GBDI01358063;XM_005407987 XP_005408044 MODEL 8865990 ncrna LOC102021742 uncharacterized LOC102021742 NW_004955410 19646329 19650590 + 102021742 AGCD01011025;AGCD01011026;GBDF01304716;XR_001232689;XR_001232690;XR_001232691;XR_001232692 MODEL 9012396 protein-coding Aen apoptosis enhancing nuclease ENCODES a protein that exhibits DNA exonuclease activity (ortholog); exonuclease activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); response to ionizing radiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955416 16328655 16338069 - 102007548 AGCD01017352;GBBH01051516;XM_005381572 XP_005381629 MODEL 9057106 protein-coding Fbxo43 F-box protein 43 INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of cell cycle process (ortholog); negative regulation of meiotic nuclear division (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 12 (ortholog); FOUND IN nucleus (ortholog) NW_004955417 15394481 15406751 - 102014897 AGCD01018231;GBDF01090210;XM_005381862;XM_013512827;XM_013512828;XM_013512829 XP_005381919;XP_013368281;XP_013368282;XP_013368283 MODEL 8742346 protein-coding Ifnar2 interferon alpha and beta receptor subunit 2 ENCODES a protein that exhibits cytokine binding (ortholog); protein kinase binding (ortholog); type I interferon binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatitis B (ortholog); immunodeficiency 45 (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955407 32601862 32637852 + 102018567 AGCD01007679;GBDI01354641;XM_005375676;XM_005375677;XM_013504240 XP_005375733;XP_005375734;XP_013359694 MODEL 8873193 protein-coding Itsn1 intersectin 1 ENCODES a protein that exhibits kinase activator activity (ortholog); molecular adaptor activity (ortholog); proline-rich region binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); endocytosis (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical dendrite (ortholog); calyx of Held (ortholog); clathrin-coated pit (ortholog) NW_004955407 33056004 33275681 + 102023330 AGCD01007695;AGCD01007696;AGCD01007697;GBDF01046720;XM_005375691;XM_005375693;XM_005375697;XM_013504344;XM_013504347;XM_013504352;XM_013504357;XM_013504361 XP_005375748;XP_005375750;XP_005375754;XP_013359798;XP_013359801;XP_013359806;XP_013359811;XP_013359815 MODEL 8840664 protein-coding Dhx32 DEAH-box helicase 32 (putative) ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955477 3720988 3778424 - 102009496 AGCD01055562;AGCD01055563;AGCD01055564;AGCD01055565;AGCD01055566;GBBH01050486;GBDJ01273219;XM_013503051 XP_013358505 MODEL 39131840 rrna 5S_rRNA 5S ribosomal RNA 9041059 protein-coding Kcnj1 potassium inwardly rectifying channel subfamily J member 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to magnesium ion (ortholog); circulatory system development (ortholog); gene expression (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Bartter disease (ortholog); Bartter disease type 2 (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955412 29801022 29832153 - 102013270 AGCD01013286;GBCQ01012015;XM_005378534;XM_005378536;XM_005378537;XM_005378538;XM_005378539;XM_005378540;XM_005378541;XM_013511264;XM_013511265 XP_005378591;XP_005378593;XP_005378594;XP_005378595;XP_005378596;XP_005378597;XP_005378598;XP_013366718;XP_013366719 MODEL 8981912 protein-coding Erg ETS transcription factor ERG ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 37372471 37613674 - 102019363 AGCD01007780;AGCD01007781;AGCD01007782;AGCD01007783;AGCD01007784;AGCD01007785;GBDK01013561;XM_005375759;XM_005375760;XM_005375761;XM_013504784 XP_005375816;XP_005375817;XP_005375818;XP_013360238 MODEL 8700144 protein-coding Ccdc198 coiled-coil domain containing 198 INVOLVED IN energy homeostasis (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955466 11331799 11369866 - 102026959 AGCD01051087;AGCD01051088;AGCD01051089;GBCQ01007372;XM_005399205;XM_005399206;XM_005399207 XP_005399262;XP_005399263;XP_005399264 MODEL 8843670 ncrna LOC102004497 uncharacterized LOC102004497 NW_004955499 552253 553238 - 102004497 AGCD01063239;XR_264215 MODEL 8926718 pseudo LOC102011145 protein salvador homolog 1 pseudogene NW_004955532 3962130 3963932 - 102011145 AGCD01070305 MODEL 8885126 protein-coding Ankrd13d ankyrin repeat domain 13D ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955422 18159337 18170480 - 102024810 AGCD01022938;GBCE01123588;XM_005384354;XM_013513947;XM_013513948;XM_013513949;XM_013513951;XM_013513952;XM_013513953;XM_013513954 XP_005384411;XP_013369401;XP_013369402;XP_013369403;XP_013369405;XP_013369406;XP_013369407;XP_013369408 MODEL 39133908 misc_rna 7SK 7SK RNA 8884247 protein-coding Bsg basigin (Ok blood group) ENCODES a protein that exhibits protein carrier activity (ortholog); signaling receptor activity (ortholog); virus receptor activity (ortholog); INVOLVED IN decidualization (ortholog); embryo implantation (ortholog); endothelial tube morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN acrosomal membrane (ortholog); basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955495 7148806 7156296 - 102023491 AGCD01062122;GBCC01008459;XM_005406036;XM_013505312 XP_005406093;XP_013360766 MODEL 8913282 protein-coding LOC102007003 ubiquilin-3 NW_004955414 21412848 21415565 - 102007003 AGCD01015418;GBDF01007353;XM_005380091 XP_005380148 MODEL 8737230 protein-coding LOC102011555 probable inactive serine protease 58 NW_004955494 1266343 1273436 + 102011555 AGCD01061393;GBDF01081972;XM_005405395;XM_013504926 XP_005405452;XP_013360380 MODEL 8894917 protein-coding Cfdp1 chromatin remodeling protein CFDP1 INVOLVED IN cell adhesion (ortholog); negative regulation of fibroblast apoptotic process (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955484 2085372 2203177 + 102021558 AGCD01058087;AGCD01058088;AGCD01058089;AGCD01058090;AGCD01058091;AGCD01058092;AGCD01058093;GBDF01047807;XM_005403448;XM_005403449 XP_005403505;XP_005403506 MODEL 9060213 protein-coding Ccr4 C-C motif chemokine receptor 4 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); homeostasis of number of cells (ortholog); inflammatory response (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); brain ischemia (ortholog); FOUND IN external side of plasma membrane (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955421 205297 210944 + 102015412 AGCD01021552;GBDJ01398859;XM_005383629;XM_005383630;XM_005383631;XM_005383633;XM_013513641 XP_005383686;XP_005383687;XP_005383688;XP_005383690;XP_013369095 MODEL 8847913 protein-coding Atp5pd ATP synthase peripheral stalk subunit d ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to peptide (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); congenital hypothyroidism (ortholog); depressive disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955553 1893767 1897175 - 102018863 AGCD01072903;GBBH01000775;XM_005412268 XP_005412325 MODEL 8828031 protein-coding LOC102009235 signal recognition particle 19 kDa protein NW_004955449 1420800 1421601 - 102009235 AGCD01041800;XM_005393194 XP_005393251 MODEL 8709255 protein-coding Trim65 tripartite motif containing 65 ENCODES a protein that exhibits protein domain specific binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of NLRP3 inflammasome complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955506 6362360 6366743 + 102010076 AGCD01065413;AGCD01065414;GBCE01065169;GBDI01290894;XM_013506003 XP_013361457 MODEL 8863835 ncrna LOC102005562 uncharacterized LOC102005562 NW_004955455 10714691 10715717 + 102005562 AGCD01045961;GBDJ01194372;XR_262853 MODEL 8943639 pseudo LOC102006611 uncharacterized protein C11orf57-like NW_004955439 11295688 11296585 + 102006611 AGCD01035896 MODEL 9029202 protein-coding Caskin1 CASK interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN regulation of postsynaptic density assembly (ortholog); signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955442 15075427 15092786 + 102029127 AGCD01037859;GBBH01155586;GBCE01037233;XM_005391448;XM_005391450;XM_005391451 XP_005391505;XP_005391507;XP_005391508 MODEL 8803814 protein-coding Limd2 LIM domain containing 2 ASSOCIATED WITH Breast Neoplasms (ortholog); melanoma (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955478 8120405 8121826 + 102024332 AGCD01056012;GBCQ01129620;GBDI01018647;XM_005402202 XP_005402259 MODEL 39131841 rrna 5S_rRNA 5S ribosomal RNA 9054837 protein-coding Col12a1 collagen type XII alpha 1 chain INVOLVED IN endodermal cell differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN collagen type XII trimer (ortholog) NW_004955488 8128816 8240714 + 102004715 AGCD01059704;AGCD01059705;GBCE01054809;XM_005404484;XM_013504416;XM_013504417 XP_005404541;XP_013359870;XP_013359871 MODEL 9020553 ncrna LOC102004130 uncharacterized LOC102004130 NW_004955447 15374198 15375706 - 102004130 AGCD01041052;GBDF01111391;XR_262435 MODEL 39132033 rrna 5S_rRNA 5S ribosomal RNA 9034505 protein-coding Gdap2 ganglioside induced differentiation associated protein 2 INVOLVED IN response to retinoic acid (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 27 (ortholog); cervical cancer (ortholog) NW_004955435 20980551 21037964 - 102010303 AGCD01033468;GBCE01057032;XM_005389060;XM_005389062;XM_005389063;XM_013516489 XP_005389117;XP_005389119;XP_005389120;XP_013371943 MODEL 9013244 pseudo LOC102008140 28S ribosomal protein S36, mitochondrial pseudogene NW_004955434 3982156 3983215 - 102008140 AGCD01032152 MODEL 39133756 misc_rna 7SK 7SK RNA 8702359 protein-coding Eml6 EMAP like 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955424 28125287 28461646 - 102014262 AGCD01025147;AGCD01025148;AGCD01025149;AGCD01025150;AGCD01025151;AGCD01025152;AGCD01025153;AGCD01025154;AGCD01025155;AGCD01025156;AGCD01025157;AGCD01025158;AGCD01025159;AGCD01025160;AGCD01025161;AGCD01025162;AGCD01025163;AGCD01025164;AGCD01025165;AGCD01025166;AGCD01025167;AGCD01025168;GBDF01277097;XM_013514622;XM_013514623;XM_013514624;XM_013514625;XM_013514626;XR_001234170 XP_013370076;XP_013370077;XP_013370078;XP_013370079;XP_013370080 MODEL 8700081 protein-coding Cacna1c calcium voltage-gated channel subunit alpha1 C ENCODES a protein that exhibits alpha-actinin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon development (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute stress disorder (ortholog); alcohol dependence (ortholog); FOUND IN axon cytoplasm; basal pole of outer hair cell; basolateral plasma membrane NW_004955454 4573647 5199046 + 102026943 AGCD01045125;AGCD01045126;AGCD01045127;AGCD01045128;AGCD01045129;AGCD01045130;AGCD01045131;AGCD01045132;GBCE01065707;XM_005395963;XM_013520117;XM_013520118;XM_013520119;XM_013520120;XM_013520121;XM_013520122;XM_013520123;XM_013520124;XM_013520125;XM_013520126;XM_013520127;XM_013520128;XM_013520129 XP_005396020;XP_013375571;XP_013375572;XP_013375573;XP_013375574;XP_013375575;XP_013375576;XP_013375577;XP_013375578;XP_013375579;XP_013375580;XP_013375581;XP_013375582;XP_013375583 MODEL 9031136 protein-coding LOC102010358 olfactory receptor 52H1-like NW_004955414 21638413 21639375 + 102010358 AGCD01015425;XM_005380101 XP_005380158 MODEL 8926604 protein-coding Cenph centromere protein H ENCODES a protein that exhibits kinetochore binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) NW_004955446 131703 135873 - 102008676 AGCD01039929;XM_013518420;XR_001235681 XP_013373874 MODEL 8993649 protein-coding Fbxo44 F-box protein 44 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955486 2204470 2210604 - 102019397 AGCD01058994;GBCB01060530;GBDI01168344;XM_013504315 XP_013359769 MODEL 8846591 protein-coding LOC102017641 tubulin beta-2A chain-like NW_004955465 10090568 10092941 + 102017641 AGCD01050501;GBDK01005775;XM_005398904 XP_005398961 MODEL 8908613 protein-coding Erg28 ergosterol biosynthesis 28 homolog ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN transport vesicle (ortholog) NW_004955612 99107 109679 - 102022872 AGCD01077180;GBDK01014402;XM_005414961;XM_005414962 XP_005415018;XP_005415019 MODEL 8968137 pseudo LOC102008500 serine/threonine-protein phosphatase 4 regulatory subunit 2-like NW_004955407 23016972 23161621 + 102008500 AGCD01007411;AGCD01007412;AGCD01007413;AGCD01007414;AGCD01007415 MODEL 8850610 protein-coding Lime1 Lck interacting transmembrane adaptor 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); regulation of canonical NF-kappaB signal transduction (ortholog); regulation of MAP kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN B cell receptor complex (ortholog) NW_004955528 490319 492943 - 102006278 AGCD01069536;GBCQ01125791;XM_005409949;XM_005409950;XM_005409951;XM_013507446;XM_013507447;XM_013507448 XP_005410006;XP_005410007;XP_005410008;XP_013362900;XP_013362901;XP_013362902 MODEL 9055743 protein-coding Adam19 ADAM metallopeptidase domain 19 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); heart development (ortholog); membrane protein ectodomain proteolysis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleus (ortholog) NW_004955408 11651298 11746391 - 102016024 AGCD01008314;AGCD01008315;AGCD01008316;AGCD01008317;GBDJ01135894;XM_005376236;XM_005376238;XM_013508800 XP_005376293;XP_005376295;XP_013364254 MODEL 8768871 protein-coding Cdca4 cell division cycle associated 4 ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955538 3345116 3356463 - 102003066 AGCD01071160;AGCD01071161;GBDK01219071;XM_005410853;XM_013507888;XM_013507889;XM_013507890;XM_013507891;XM_013507892;XM_013507893 XP_005410910;XP_013363342;XP_013363343;XP_013363344;XP_013363345;XP_013363346;XP_013363347 MODEL 8828251 protein-coding E2f2 E2F transcription factor 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); lens fiber cell apoptotic process (ortholog); negative regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); Disease Progression (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955452 3498077 3518033 - 102016226 AGCD01043927;AGCD01043928;GBBH01166880;XM_005394765;XM_005394766 XP_005394822;XP_005394823 MODEL 10372034 ncrna LOC106149930 uncharacterized LOC106149930 NW_004955402 5747561 5749079 - 106149930 AGCD01000138;GBDF01196370;XR_001236414 MODEL 8734258 protein-coding Abt1 activator of basal transcription 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); spinal cord motor neuron differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Disease Progression (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955483 307893 310932 - 102010587 AGCD01057606;GBBH01228186;XM_005403274 XP_005403331 MODEL 8837479 ncrna LOC102009608 uncharacterized LOC102009608 NW_004955481 940584 941784 - 102009608 AGCD01056818;GBDF01049337;XR_263757 MODEL 8778320 pseudo LOC102011560 uncharacterized protein C8orf59 homolog NW_004955500 5318759 5319643 - 102011560 AGCD01063830 MODEL 39134043 misc_rna 7SK 7SK RNA 8835907 protein-coding Il26 interleukin 26 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); positive regulation of cytokine production (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog) NW_004955458 14701471 14718980 - 102028721 AGCD01047844;AGCD01047845;GBBH01023513;XM_005397467 XP_005397524 MODEL 8869112 protein-coding Ccr6 C-C motif chemokine receptor 6 ENCODES a protein that exhibits C-C chemokine binding (ortholog); C-C chemokine receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell chemotaxis (ortholog); chemotaxis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955439 14921524 14949493 - 102023297 AGCD01035993;AGCD01035994;GBBH01044122;XM_005390643 XP_005390700 MODEL 8789404 protein-coding Atp5pf ATP synthase peripheral stalk subunit F6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN negative regulation of arachidonate secretion (ortholog); negative regulation of prostaglandin secretion (ortholog); positive regulation of blood pressure (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); essential hypertension (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); mitochondrion (ortholog) NW_004955407 25601253 25609933 - 102017843 AGCD01007512;GBDK01357064;XM_005375588;XM_005375589 XP_005375645;XP_005375646 MODEL 8922337 ncrna LOC102021744 uncharacterized LOC102021744 NW_004955466 3543674 3550573 + 102021744 AGCD01050796;GBDF01211120;XR_263286;XR_263287 MODEL 8753689 protein-coding Cidec cell death inducing DFFA like effector c ENCODES a protein that exhibits lipid transfer activity (ortholog); molecular condensate scaffold activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN apoptotic process (ortholog); execution phase of apoptosis (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 5 (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955561 1363907 1376144 - 102023081 AGCD01073851;AGCD01073852;AGCD01073853;GBDJ01009118;XM_013509089;XM_013509090;XM_013509091 XP_013364543;XP_013364544;XP_013364545 MODEL 8966292 protein-coding Emp1 epithelial membrane protein 1 INVOLVED IN apoptotic process (ortholog); bleb assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 10062621 10081551 + 102022803 AGCD01013925;GBCE01001043;XM_005378983 XP_005379040 MODEL 8803705 protein-coding Aplp1 amyloid beta precursor like protein 1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); alpha-2B adrenergic receptor binding (ortholog); alpha-2C adrenergic receptor binding (ortholog); INVOLVED IN cellular response to norepinephrine stimulus (ortholog); cytosolic mRNA polyadenylation (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955468 2694286 2703658 - 102018378 AGCD01051833;GBCQ01114642;GBDF01190756;XM_005400298 XP_005400355 MODEL 8902792 pseudo LOC102006616 renin receptor pseudogene NW_004955442 7678453 7681635 + 102006616 AGCD01037628;XM_005391180 MODEL 8975578 protein-coding Trim66 tripartite motif containing 66 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromocenter (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 24405986 24459729 - 102019264 AGCD01015545;AGCD01015546;GBDF01083727;XM_005380224;XM_013511881;XM_013511883;XM_013511884;XM_013511885;XM_013511886 XP_005380281;XP_013367335;XP_013367337;XP_013367338;XP_013367339;XP_013367340 MODEL 9058279 protein-coding Itsn2 intersectin 2 INVOLVED IN cell-cell signaling (ortholog); endocytosis (ortholog); positive regulation of dendrite extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog) NW_004955469 6358131 6493956 - 102027397 AGCD01052386;AGCD01052387;AGCD01052388;AGCD01052389;AGCD01052390;GBDI01125250;XM_005400386;XM_013522611;XM_013522612 XP_005400443;XP_013378065;XP_013378066 MODEL 8968521 protein-coding Dhx33 DEAH-box helicase 33 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); double-stranded RNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN canonical inflammasome complex (ortholog); cytoplasm (ortholog); NLRP3 inflammasome complex (ortholog) NW_004955467 10797464 10819083 - 102028397 AGCD01051584;GBCQ01060054;XM_005399647 XP_005399704 MODEL 8838828 pseudo LOC102003793 R-spondin-3 pseudogene NW_004955514 156613 206653 - 102003793 AGCD01066997;AGCD01066998;AGCD01066999;AGCD01067000;AGCD01067001 MODEL 8819152 protein-coding Hsd17b8 hydroxysteroid 17-beta dehydrogenase 8 ENCODES a protein that exhibits (3R)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); NADH binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen biosynthetic process (ortholog); estrogen metabolic process (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); mitochondrial envelope (ortholog) NW_004955437 1778276 1780397 + 102027337 AGCD01034233;GBDI01074933;XM_005389472;XR_261825 XP_005389529 MODEL 8716228 protein-coding LOC102012773 fatty acid-binding protein, liver NW_004955424 624397 629958 + 102012773 AGCD01024188;GBCQ01000092;XM_005385381 XP_005385438 MODEL 39133909 misc_rna 7SK 7SK RNA 39132034 rrna 5S_rRNA 5S ribosomal RNA 8972996 protein-coding Bsn bassoon presynaptic cytomatrix protein ENCODES a protein that exhibits dynein light chain binding (ortholog); enzyme inhibitor activity (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN axo-dendritic transport (ortholog); modulation of chemical synaptic transmission (ortholog); presynaptic active zone assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); axon cytoplasm (ortholog); cell cortex (ortholog) NW_004955532 1527336 1578394 + 102008256 AGCD01070191;AGCD01070192;AGCD01070193;AGCD01070194;GBDF01249114;XM_013507574 XP_013363028 MODEL 8891070 protein-coding Ankrd16 ankyrin repeat domain 16 INVOLVED IN tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955421 22520707 22535618 - 102027989 AGCD01022138;AGCD01022139;GBDJ01350347;XM_005383851;XM_013513667;XM_013513668 XP_005383908;XP_013369121;XP_013369122 MODEL 8915776 protein-coding Cfi complement factor I INVOLVED IN cellular response to interleukin-6 (ortholog); complement activation (ortholog); gene expression (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); age related macular degeneration 13 (ortholog); FOUND IN extracellular region (ortholog); serine-type endopeptidase complex (ortholog) NW_004955496 492217 553398 + 102025262 AGCD01062228;AGCD01062229;AGCD01062230;AGCD01062231;AGCD01062232;AGCD01062233;AGCD01062234;AGCD01062235;GBCE01089340;XM_013505440;XM_013505441 XP_013360894;XP_013360895 MODEL 8972148 protein-coding Aldh2 aldehyde dehydrogenase 2 family member ENCODES a protein that exhibits acetaldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); carboxylesterase activity (ortholog); INVOLVED IN acetaldehyde metabolic process (ortholog); aldehyde catabolic process (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Acute Alcohol Sensitivity (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955482 8352569 8383097 + 102030529 AGCD01057517;GBCE01001171;XM_005403173 XP_005403230 MODEL 8935282 ncrna LOC102009239 uncharacterized LOC102009239 NW_004955586 997656 1002493 + 102009239 AGCD01076049;GBDJ01242970;XR_265115 MODEL 39133757 misc_rna 7SK 7SK RNA 8923267 protein-coding LOC102005563 chromosome unknown open reading frame, human C5orf52 ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog) NW_004955455 4906038 4911269 + 102005563 AGCD01045705;GBDF01215498;XM_013520307 XP_013375761 MODEL 8947975 protein-coding Ifnb1 interferon beta 1 ENCODES a protein that exhibits chloramphenicol O-acetyltransferase activity (ortholog); cytokine activity (ortholog); cytokine receptor binding (ortholog); INVOLVED IN adaptive immune response (ortholog); B cell activation involved in immune response (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH amelanotic melanoma (ortholog); anus benign neoplasm (ortholog); Aortic Remodeling (ortholog); FOUND IN extracellular region (ortholog) NW_004955434 23301623 23302304 - 102004511 AGCD01032701;XM_005388742 XP_005388799 MODEL 8930836 protein-coding Clpb ClpB family mitochondrial disaggregase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent protein disaggregase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to heat (ortholog); granulocyte differentiation (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); 3-methylglutaconic aciduria type 7a (ortholog); 3-methylglutaconic aciduria type 7b (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955414 18968144 19106241 + 102025453 AGCD01015297;GBDF01006462;XM_005379988;XM_005379989 XP_005380045;XP_005380046 MODEL 39134345 misc_rna 7SK 7SK RNA 8996982 protein-coding Ehmt2 euchromatic histone lysine methyltransferase 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); H1-4K26 methyltransferase activity (ortholog); histone H3K27 methyltransferase activity (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to cocaine (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alopecia areata (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nuclear speck (ortholog) NW_004955437 396736 411144 - 102003800 AGCD01034129;GBCE01187461;GBCQ01066738;XM_005389393;XM_005389394;XM_013516776;XM_013516777 XP_005389450;XP_005389451;XP_013372230;XP_013372231 MODEL 8705583 protein-coding Caskin2 CASK interacting protein 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955553 2353767 2367357 - 102027793 AGCD01072935;GBCQ01038679;XM_005412298;XM_005412299;XM_013508626 XP_005412355;XP_005412356;XP_013364080 MODEL 39131842 rrna 5S_rRNA 5S ribosomal RNA 8943241 protein-coding LOC102011150 uncharacterized LOC102011150 NW_004955440 3381418 3382941 - 102011150 AGCD01036241;GBDF01052510;XM_005390767;XM_013517492 XP_005390824;XP_013372946 MODEL 9026066 protein-coding LOC102004135 beta-defensin 105-like NW_004955403 53573434 53576556 - 102004135 AGCD01003064;GBCE01155754;XM_005373832 XP_005373889 MODEL 9066734 protein-coding Fbxo45 F-box protein 45 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); cerebral cortex radially oriented cell migration (ortholog); cerebral cortex tangential migration (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955420 12714749 12727600 + 102023811 AGCD01020886;GBBH01138893;GBDF01075808;XM_013513505 XP_013368959 MODEL 9043223 protein-coding Col13a1 collagen type XIII alpha 1 chain ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-matrix adhesion (ortholog); endochondral ossification (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) NW_004955437 21256410 21393385 - 102018026 AGCD01034906;GBDK01341077;XM_005390075;XM_005390076;XM_013517025;XM_013517026;XM_013517027;XM_013517028;XM_013517029;XM_013517030;XM_013517031;XM_013517032;XM_013517033;XM_013517034;XM_013517035;XM_013517036 XP_005390132;XP_005390133;XP_013372479;XP_013372480;XP_013372481;XP_013372482;XP_013372483;XP_013372484;XP_013372485;XP_013372486;XP_013372487;XP_013372488;XP_013372489;XP_013372490 MODEL 9052905 protein-coding E2f3 E2F transcription factor 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of fat cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955483 6039569 6116000 - 102015522 AGCD01057768;AGCD01057769;GBBH01045634;GBCB01101037;XM_005403385 XP_005403442 MODEL 8842261 pseudo LOC102008143 ras-related protein Rab-28 pseudogene NW_004955435 20586269 20586938 - 102008143 AGCD01033457 MODEL 8796130 pseudo LOC102011563 serine/threonine-protein kinase Sgk1 pseudogene NW_004955426 24322315 24323612 + 102011563 AGCD01026676 MODEL 8918115 pseudo LOC102010366 regulator of nonsense transcripts 2 pseudogene NW_004955416 11225709 11227659 + 102010366 AGCD01017181 MODEL 9040827 protein-coding LOC102004498 cytochrome P450 26A1 NW_004955425 371850 388364 - 102004498 AGCD01025182;GBDF01144580;XM_005385819;XM_005385820;XM_005385821;XM_013514753 XP_005385876;XP_005385877;XP_005385878;XP_013370207 MODEL 8913623 protein-coding Aplp2 amyloid beta precursor like protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); extracellular matrix organization (ortholog); forebrain development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); spine apparatus (ortholog) NW_004955412 31043320 31075617 + 102020897 AGCD01013323;GBCQ01009463;XM_005378559;XM_005378560;XM_005378561;XM_005378562 XP_005378616;XP_005378617;XP_005378618;XP_005378619 MODEL 8984583 protein-coding Trim67 tripartite motif containing 67 INVOLVED IN negative regulation of Ras protein signal transduction (ortholog); positive regulation of neuron projection development (ortholog); positive regulation of ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955492 7538492 7578257 - 102009850 AGCD01060800;GBDI01166263;XM_005404980;XM_005404981;XM_013504687;XM_013504688 XP_005405037;XP_005405038;XP_013360141;XP_013360142 MODEL 8717643 protein-coding Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955408 25540149 25644108 + 102027272 AGCD01008647;GBCB01057939;XM_005376342;XM_013509355;XM_013509357;XM_013509359 XP_005376399;XP_013364809;XP_013364811;XP_013364813 MODEL 8938032 ncrna LOC102003796 uncharacterized LOC102003796 NW_004955433 12458790 12516903 - 102003796 AGCD01031664;GBBH01126520;XR_001234747;XR_001234748;XR_001234749;XR_001234750;XR_001234751;XR_001234752;XR_261587 MODEL 8978307 ncrna LOC102008501 uncharacterized LOC102008501 NW_004955457 7028448 7038296 + 102008501 AGCD01046864;GBCB01099923;XR_262927 MODEL 8946358 pseudo LOC102007005 etoposide-induced protein 2.4 homolog pseudogene NW_004955414 3807141 3816292 + 102007005 AGCD01014841 MODEL 8901342 protein-coding Adam2 ADAM metallopeptidase domain 2 INVOLVED IN adult behavior (ortholog); cell adhesion (ortholog); gene expression (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); protein-containing complex (ortholog) NW_004955403 50046262 50115004 + 102005989 AGCD01002955;AGCD01002956;AGCD01002957;AGCD01002958;AGCD01002959;GBDF01007405;XM_005373747;XM_013514227 XP_005373804;XP_013369681 MODEL 8732373 protein-coding Limk1 LIM domain kinase 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of actin filament bundle assembly (ortholog); positive regulation of axon extension (ortholog); positive regulation of stress fiber assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955456 13751135 13773722 - 102020206 AGCD01046617;AGCD01046618;GBCB01130874;GBCE01065465;XM_013520581 XP_013376035 MODEL 8925452 protein-coding Gde1 glycerophosphodiester phosphodiesterase 1 ENCODES a protein that exhibits glycerophosphodiester phosphodiesterase activity (ortholog); glycerophosphoinositol glycerophosphodiesterase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN ethanolamine metabolic process (ortholog); N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH colorectal cancer (ortholog); Familial Prostate Cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955442 3186440 3219092 - 102008150 AGCD01037499;AGCD01037500;GBCQ01062110;XM_005391107 XP_005391164 MODEL 8716536 ncrna LOC102004137 uncharacterized LOC102004137 NW_004955404 19087590 19138303 + 102004137 AGCD01003636;AGCD01003637;AGCD01003638;AGCD01003639;GBCE01122216;XR_259319 MODEL 9036784 protein-coding Ciita class II major histocompatibility complex transactivator ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to electrical stimulus (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH acute kidney tubular necrosis (ortholog); acute myeloid leukemia (ortholog); Addison's disease (ortholog); FOUND IN cell surface (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 7600903 7647619 - 102006289 AGCD01037625;AGCD01037626;GBDK01084553;XM_013517881;XM_013517882;XM_013517883;XM_013517884;XM_013517886;XM_013517887;XM_013517888;XM_013517889;XM_013517890;XM_013517891;XM_013517892;XM_013517893;XM_013517894 XP_013373335;XP_013373336;XP_013373337;XP_013373338;XP_013373340;XP_013373341;XP_013373342;XP_013373343;XP_013373344;XP_013373345;XP_013373346;XP_013373347;XP_013373348 MODEL 8870099 protein-coding Abtb1 ankyrin repeat and BTB domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955429 15964584 15968604 - 102029098 AGCD01028824;GBDJ01090295;XM_005387052 XP_005387109 MODEL 39134044 misc_rna 7SK 7SK RNA 9010466 protein-coding Afap1 actin filament associated protein 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); SH2 domain binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); lactation (ortholog); lipid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); plasma membrane (ortholog) NW_004955514 2934115 3050347 + 102013642 AGCD01067090;AGCD01067091;AGCD01067092;GBDF01082445;XM_013506784;XM_013506786;XM_013506787 XP_013362238;XP_013362240;XP_013362241 MODEL 8964187 protein-coding Il27 interleukin 27 ENCODES a protein that exhibits interleukin-27 receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of defense response to virus by host (ortholog); positive regulation of type II interferon production (ortholog); regulation of T cell proliferation (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Arenaviridae infectious disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955493 6712005 6717417 - 102016819 AGCD01061131;GBDK01404205;XM_005405170 XP_005405227 MODEL 8725356 protein-coding LOC102009610 dnaJ homolog subfamily C member 25 NW_004955419 15664786 15684889 - 102009610 AGCD01020086;AGCD01020087;GBBH01057437;GBDF01120670;XM_013513302 XP_013368756 MODEL 8960196 pseudo LOC102021745 28S ribosomal protein S36, mitochondrial pseudogene NW_004955412 24132530 24132928 - 102021745 AGCD01013110;XM_005378380 MODEL 8974473 protein-coding Atp5po ATP synthase peripheral stalk subunit OSCP ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); estradiol binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to cytokine stimulus (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cell surface (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955407 33288194 33298817 - 102025210 AGCD01007697;GBCQ01008219;XM_005375698 XP_005375755 MODEL 8737621 protein-coding Cenpi centromere protein I INVOLVED IN follicle-stimulating hormone signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN inner kinetochore (ortholog); kinetochore (ortholog); nuclear body (ortholog) NW_004955503 7237080 7341702 + 102014265 AGCD01064785;AGCD01064786;AGCD01064787;AGCD01064788;AGCD01064789;XM_005415260 XP_005415317 MODEL 8747352 protein-coding Cacna1d calcium voltage-gated channel subunit alpha1 D ENCODES a protein that exhibits alpha-actinin binding (ortholog); ankyrin binding (ortholog); calcium channel activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; insulin secretion pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoma (ortholog); Alcohol Withdrawal Seizures (ortholog); FOUND IN basolateral plasma membrane; dendrite; neuron projection terminus NW_004955430 3450151 3796983 + 102030453 AGCD01029217;AGCD01029218;AGCD01029219;AGCD01029220;AGCD01029221;AGCD01029222;AGCD01029223;GBCE01065714;XM_005387368;XM_005387369;XM_005387371;XM_005387372;XM_005387373;XM_013515605;XM_013515606;XM_013515607;XM_013515608;XM_013515609 XP_005387425;XP_005387426;XP_005387428;XP_005387429;XP_005387430;XP_013371059;XP_013371060;XP_013371061;XP_013371062;XP_013371063 MODEL 8797513 ncrna LOC102006617 uncharacterized LOC102006617 NW_004955554 279370 284309 - 102006617 AGCD01072943;XR_264944 MODEL 9049093 protein-coding Emp2 epithelial membrane protein 2 ENCODES a protein that exhibits integrin binding (ortholog); kinase binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin-mediated cell contraction (ortholog); apoptotic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); nephrotic syndrome type 10 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); caveola (ortholog) NW_004955442 7826967 7862035 + 102009227 AGCD01037628;GBCB01040537;XM_005391190 XP_005391247 MODEL 8834866 protein-coding Ivd isovaleryl-CoA dehydrogenase ENCODES a protein that exhibits 3-methylbutanoyl-CoA dehydrogenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955416 7327557 7341533 + 102019911 AGCD01016973;AGCD01016974;GBDF01193059;XM_005381234 XP_005381291 MODEL 8838388 pseudo LOC102017642 thioredoxin pseudogene NW_004955465 2024398 2024702 - 102017642 AGCD01050347 MODEL 8848300 protein-coding Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN membrane protein proteolysis (ortholog); protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH Cognitive Dysfunction (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN endopeptidase Clp complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955495 3224968 3233482 - 102015539 AGCD01061839;AGCD01061840;AGCD01061841;GBDI01172235;XM_005405726 XP_005405783 MODEL 8837074 protein-coding Ei24 EI24 autophagy associated transmembrane protein ENCODES a protein that exhibits importin-alpha family protein binding (ortholog); INVOLVED IN autophagy (ortholog); cellular response to UV-C (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955412 26574814 26586154 + 102021428 AGCD01013199;AGCD01013200;GBCQ01039359;XM_005378462 XP_005378519 MODEL 8864807 protein-coding Dhx34 DExH-box helicase 34 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); positive regulation of phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955574 1248058 1267399 + 102009334 AGCD01075171;GBDJ01135621;XM_005413866;XM_013509536;XM_013509537 XP_005413923;XP_013364990;XP_013364991 MODEL 8706071 protein-coding Cdca5 cell division cycle associated 5 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN double-strand break repair (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955422 20114565 20129679 + 102017464 AGCD01023066;GBDK01415409;XM_005384519;XM_005384521;XM_013514192;XM_013514193;XM_013514194;XR_001233977;XR_001233978 XP_005384576;XP_005384578;XP_013369646;XP_013369647;XP_013369648 MODEL 8976933 pseudo LOC102012779 dynactin subunit 6 pseudogene NW_004955425 21033663 21038693 - 102012779 AGCD01025781 MODEL 8786262 protein-coding LOC102011152 serine protease 29-like NW_004955442 15971410 15973505 + 102011152 AGCD01037889;XM_005391589 XP_005391646 MODEL 39133910 misc_rna 7SK 7SK RNA 8822158 protein-coding Bsnd barttin CLCNK type accessory subunit beta ENCODES a protein that exhibits chloride channel activity (ortholog); chloride channel regulator activity (ortholog); INVOLVED IN chloride transport (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bartter disease (ortholog); Bartter disease type 4A (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955464 4459686 4468749 - 102023448 AGCD01049991;GBCQ01002696;XM_013521764 XP_013377218 MODEL 9045864 protein-coding Col14a1 collagen type XIV alpha 1 chain INVOLVED IN collagen fibril organization (ortholog); homeostasis of number of cells within a tissue (ortholog); regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN interstitial matrix (ortholog) NW_004955417 25579547 25774067 + 102009175 AGCD01018491;AGCD01018492;AGCD01018493;GBBH01077418;XM_005381916;XM_013512819;XM_013512820 XP_005381973;XP_013368273;XP_013368274 MODEL 9055192 protein-coding Ankrd17 ankyrin repeat domain 17 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blood vessel maturation (ortholog); defense response to bacterium (ortholog); innate immune response (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955447 259654 376147 + 102018039 AGCD01040450;GBDK01196552;XM_005392762;XM_005392763;XM_005392764;XM_005392765;XM_005392766;XM_005392767 XP_005392819;XP_005392820;XP_005392821;XP_005392822;XP_005392823;XP_005392824 MODEL 8730781 protein-coding E2f4 E2F transcription factor 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); cell volume homeostasis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); lung cancer (ortholog); Lynch syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955484 9421396 9427826 - 102010488 AGCD01058415;GBDF01118876;XM_005403677;XM_013503914;XM_013503915 XP_005403734;XP_013359368;XP_013359369 MODEL 8826230 protein-coding Cfl1 cofilin 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); actin filament severing activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); cell motility (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH brain compression (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cell leading edge (ortholog); cell-cell junction (ortholog); cofilin-actin rod (ortholog) NW_004955422 19479181 19482571 + 102027078 AGCD01023011;GBDI01011011;XM_013513851 XP_013369305 MODEL 8773039 pseudo LOC102009242 nucleolar and spindle-associated protein 1 pseudogene NW_004955402 63057108 63065990 + 102009242 AGCD01001653 MODEL 39133758 misc_rna 7SK 7SK RNA 8832126 pseudo LOC102005565 histone-binding protein RBBP4-B-like NW_004955407 19026615 19027887 - 102005565 AGCD01007294 MODEL 8948617 protein-coding Ifne interferon epsilon INVOLVED IN defense response to bacterium (ortholog); defense response to virus (ortholog); natural killer cell activation (ortholog) NW_004955472 12795352 12801035 - 102006570 AGCD01053817;XM_005401170 XP_005401227 MODEL 39134346 misc_rna 7SK 7SK RNA 8730162 pseudo LOC102009612 zinc finger matrin-type protein 2 pseudogene NW_004955485 7634595 7636928 - 102009612 AGCD01058668 MODEL 9022544 protein-coding Aldh3a1 aldehyde dehydrogenase 3 family member A1 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); positive regulation of cell population proliferation (ortholog); response to cAMP (ortholog); PARTICIPATES IN alkaptonuria pathway; cyclophosphamide pharmacodynamics pathway; cyclophosphamide pharmacokinetics pathway; ASSOCIATED WITH arteriosclerosis (ortholog); autism spectrum disorder (ortholog); cataract (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955467 96140 105738 + 102025778 AGCD01051209;GBBH01172351;XM_005399260;XM_013522026 XP_005399317;XP_013377480 MODEL 9025810 protein-coding Casp14 caspase 14 ASSOCIATED WITH Autosomal Recessive Congenital Ichthyosis 12 (ortholog); cervical cancer (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955495 8214512 8221124 - 102013186 AGCD01062190;GBCC01000472;XM_005406098;XM_005406099 XP_005406155;XP_005406156 MODEL 39131844 rrna 5S_rRNA 5S ribosomal RNA 8782144 protein-coding Kcnj10 potassium inwardly rectifying channel subfamily J member 10 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cellular response to potassium ion (ortholog); central nervous system myelination (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); amyotrophic lateral sclerosis (ortholog); Ataxia (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte projection (ortholog); basolateral plasma membrane (ortholog) NW_004955468 11828525 11860365 - 102012626 AGCD01052139;GBBH01193401;XM_005400189 XP_005400246 MODEL 8775286 protein-coding Ergic2 ERGIC and golgi 2 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); craniolenticulosutural dysplasia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955505 5548588 5583503 + 102015131 AGCD01065152;GBDF01112264;XM_005407138;XM_005407139;XM_005407140;XM_013505937;XM_013505938 XP_005407195;XP_005407196;XP_005407197;XP_013361391;XP_013361392 MODEL 39132035 rrna 5S_rRNA 5S ribosomal RNA 8774400 protein-coding Limk2 LIM domain kinase 2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN astral microtubule organization (ortholog); cornea development in camera-type eye (ortholog); establishment of vesicle localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955455 5406085 5473418 + 102005894 AGCD01045726;AGCD01045727;GBCE01030826;XM_005396301;XM_005396302;XM_005396304;XM_005396305;XM_013520329 XP_005396358;XP_005396359;XP_005396361;XP_005396362;XP_013375783 MODEL 8938897 protein-coding Ccr7 C-C motif chemokine receptor 7 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); C-C motif chemokine 19 receptor activity (ortholog); C-C motif chemokine 21 receptor activity (ortholog); INVOLVED IN CCL19-activated CCR7 signaling pathway (ortholog); CCL21-activated CCR7 signaling pathway (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); aspergillosis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); mitochondrion (ortholog) NW_004955451 15086119 15101862 - 102014854 AGCD01043594;AGCD01043595;AGCD01043596;GBDI01080307;XM_005394362 XP_005394419 MODEL 8926148 pseudo LOC102008145 kinesin-associated protein 3 pseudogene NW_004955436 21887648 21900523 - 102008145 AGCD01034080 MODEL 8794655 ncrna LOC102010368 uncharacterized LOC102010368 NW_004955417 26506352 26519514 - 102010368 AGCD01018512;AGCD01018513;GBDJ01093566;XR_001233419;XR_001233420;XR_001233421 MODEL 9064526 protein-coding Ccdc22 CCC complex scaffolding subunit CCDC22 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane transport (ortholog); intracellular copper ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); protein-containing complex (ortholog) NW_004955543 719185 731788 + 102014493 AGCD01071599;GBCQ01100165;XM_005411347 XP_005411404 MODEL 10362863 protein-coding Gpx1 glutathione peroxidase 1 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); peroxidase activity (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); apoptotic process (ortholog); arachidonate metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Lewy body (ortholog) NW_004955532 1298336 1298830 - 106147241 AGCD01070176;GBBH01002887;GBCB01000458;XM_013507631 XP_013363085 MODEL 9002324 protein-coding Il27ra interleukin 27 receptor subunit alpha ENCODES a protein that exhibits interleukin-27 receptor activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cellular extravasation (ortholog); negative regulation of interleukin-17 production (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); cervical cancer (ortholog); FOUND IN humanin receptor complex (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955415 32749682 32762532 + 102009171 AGCD01016732;GBBH01006488;XM_005381079;XM_005381080;XM_005381081;XM_005381082 XP_005381136;XP_005381137;XP_005381138;XP_005381139 MODEL 8856988 protein-coding Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 ENCODES a protein that exhibits 3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity (ortholog); steroid Delta-isomerase activity (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); C21-steroid hormone biosynthetic process (ortholog); hippocampus development (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH Adrenal Hyperplasia 2 (ortholog); Alzheimer's disease (ortholog); congenital adrenal hyperplasia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955435 22414605 22421682 + 102015342 AGCD01033503;GBCQ01073845;XM_013516570;XM_013516571 XP_013372024;XP_013372025 MODEL 8905735 protein-coding Apmap adipocyte plasma membrane associated protein ENCODES a protein that exhibits arylesterase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) NW_004955415 31089413 31108657 - 102009044 AGCD01016669;GBDF01228097;XM_005380982 XP_005381039 MODEL 9056289 pseudo LOC102008504 nuclear receptor subfamily 5 group A member 2 pseudogene NW_004955408 668410 669063 + 102008504 AGCD01007925 MODEL 39131549 protein-coding CDCA5 cell division cycle associated 5 10146797 ncrna LOC106149931 uncharacterized LOC106149931 NW_004955457 7882946 7885290 + 106149931 AGCD01046891;XR_001236413 MODEL 8996269 pseudo LOC102003803 calmodulin-like NW_004955437 19660488 19661153 + 102003803 AGCD01034865 MODEL 8831810 protein-coding Adam22 ADAM metallopeptidase domain 22 INVOLVED IN adult locomotory behavior (ortholog); gliogenesis (ortholog); myelination in peripheral nervous system (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); developmental and epileptic encephalopathy 61 (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); glutamatergic synapse (ortholog) NW_004955432 5306018 5536282 + 102026782 AGCD01030778;AGCD01030779;AGCD01030780;AGCD01030781;AGCD01030782;AGCD01030783;AGCD01030784;AGCD01030785;AGCD01030786;GBBH01146350;GBCE01145833;XM_013516010;XM_013516011;XM_013516012;XM_013516013;XM_013516014 XP_013371464;XP_013371465;XP_013371466;XP_013371467;XP_013371468 MODEL 8723474 protein-coding Gdf10 growth differentiation factor 10 INVOLVED IN cerebellum development (ortholog); fat cell differentiation (ortholog); negative regulation of ossification (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); Breast Neoplasms (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955556 2185121 2195150 + 102013654 AGCD01073208;GBCE01004420;XM_005412611 XP_005412668 MODEL 8750907 ncrna LOC102004139 uncharacterized LOC102004139 NW_004955405 42055348 42065223 + 102004139 AGCD01005576;GBBH01086245;XR_259457 MODEL 9036095 protein-coding LOC102011568 olfactory receptor 1013-like NW_004955511 1833015 1833950 + 102011568 AGCD01066381;XM_005407979 XP_005408036 MODEL 8874828 protein-coding Col15a1 collagen type XV alpha 1 chain PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN basement membrane (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955419 26577172 26687750 - 102017022 AGCD01020413;AGCD01020414;GBDJ01091399;XM_005382825 XP_005382882 MODEL 8948582 pseudo LOC102005569 UDP-N-acetylhexosamine pyrophosphorylase pseudogene NW_004955458 8136442 8138154 - 102005569 AGCD01047600 MODEL 8707158 ncrna LOC102006623 uncharacterized LOC102006623 NW_004955563 2035807 2036366 + 102006623 AGCD01074168;GBDF01050491;XR_265019 MODEL 8814120 pseudo LOC102004499 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955500 2984102 2984589 + 102004499 AGCD01063724 MODEL 8704622 protein-coding Cenpk centromere protein K INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); castration-resistant prostate carcinoma (ortholog); cervical cancer (ortholog); FOUND IN inner kinetochore (ortholog); nucleus (ortholog) NW_004955446 3531702 3583914 + 102021058 AGCD01040022;GBDF01226475;XM_005392631 XP_005392688 MODEL 8781804 protein-coding Ifng interferon gamma ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antigen processing and presentation (ortholog); apoptotic process (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acquired immunodeficiency syndrome (ortholog); acute disseminated encephalomyelitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); perikaryon (ortholog) NW_004955458 14643333 14648020 - 102028383 AGCD01047841;GBDJ01404961;XM_005397466 XP_005397523 MODEL 9003366 protein-coding LOC102021746 leucine-rich repeat-containing protein 9 NW_004955466 9624286 9721243 - 102021746 AGCD01051047;AGCD01051048;AGCD01051049;AGCD01051050;AGCD01051051;GBDK01266613;XM_013522015 XP_013377469 MODEL 8789859 protein-coding Ivl involucrin INVOLVED IN keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); regulation of antibacterial peptide production (ortholog); ASSOCIATED WITH Skin Neoplasms (ortholog); squamous cell carcinoma (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955592 522730 525728 - 102012043 AGCD01076317;GBCQ01139611;XM_005414617;XM_013509985 XP_005414674;XP_013365439 MODEL 8995918 ncrna LOC102017644 uncharacterized LOC102017644 NW_004955412 23698957 23719026 - 102017644 AGCD01013092;GBDF01274071;XR_001232911;XR_001232912;XR_001232913;XR_001232914;XR_001232915 MODEL 8748986 protein-coding Cacna1e calcium voltage-gated channel subunit alpha1 E ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); voltage-gated monoatomic cation channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); arthrogryposis multiplex congenita (ortholog); autistic disorder (ortholog); FOUND IN neuronal cell body; GABA-ergic synapse (ortholog); perikaryon (ortholog) NW_004955406 20356564 20824679 + 102014412 AGCD01006105;AGCD01006106;AGCD01006107;AGCD01006108;GBDF01106809;XM_005374993;XM_013521375;XM_013521381;XM_013521387;XM_013521398;XM_013521405;XM_013521412 XP_005375050;XP_013376829;XP_013376835;XP_013376841;XP_013376852;XP_013376859;XP_013376866 MODEL 8719709 protein-coding Clps colipase ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN positive regulation of catalytic activity (ortholog); post-embryonic development (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); thymoma (ortholog); type 2 diabetes mellitus (ortholog) NW_004955437 3624676 3626529 - 102003063 AGCD01034327;XM_005389567 XP_005389624 MODEL 8999932 protein-coding Trim69 tripartite motif containing 69 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of cGAS/STING signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); multisystem inflammatory syndrome in children (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955409 8376449 8394651 - 102024980 AGCD01009402;AGCD01009403;AGCD01009404;AGCD01009405;AGCD01009406;GBDF01053402;XM_005376746 XP_005376803 MODEL 8792510 protein-coding Fbxo46 F-box protein 46 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) NW_004955574 177374 191720 - 102018542 AGCD01075090;GBCB01111264;XM_005413803;XM_005413804;XM_005413805;XM_005413806;XM_005413807;XM_005413808;XM_013509515 XP_005413860;XP_005413861;XP_005413862;XP_005413863;XP_005413864;XP_005413865;XP_013364969 MODEL 8837437 pseudo LOC102007014 40S ribosomal protein S15a pseudogene NW_004955418 14137072 14137418 + 102007014 AGCD01019064 MODEL 39133911 misc_rna 7SK 7SK RNA 8792325 protein-coding Dhx35 DEAH-box helicase 35 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); in utero embryonic development (ortholog); positive regulation of interferon-beta production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955445 17753975 17827748 - 102007949 AGCD01039896;GBCB01099680;XM_005392524 XP_005392581 MODEL 8838137 ncrna LOC102011155 uncharacterized LOC102011155 NW_004955446 10576607 10593188 + 102011155 AGCD01040183;GBDF01235922;XR_262391 MODEL 39134045 misc_rna 7SK 7SK RNA 8937083 protein-coding Abtb2 ankyrin repeat and BTB domain containing 2 INVOLVED IN cellular response to toxic substance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 11913334 12082421 + 102017992 AGCD01022773;AGCD01022774;AGCD01022775;AGCD01022776;GBCQ01153025;XM_005384147 XP_005384204 MODEL 8859237 protein-coding LOC102009244 high mobility group protein B1-like NW_004957564 9 553 + 102009244 AGCD01080960;XM_005415232 XP_005415289 MODEL 39133759 misc_rna 7SK 7SK RNA 9021016 protein-coding Ccr8 C-C motif chemokine receptor 8 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); high grade glioma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955427 24646358 24690580 - 102023722 AGCD01027516;AGCD01027517;GBDJ01028689;XM_005386554;XM_005386555;XM_005386556;XM_013515222 XP_005386611;XP_005386612;XP_005386613;XP_013370676 MODEL 8700900 protein-coding ATP6 ATP synthase F0 subunit 6 MT 7932 8612 + 15822207 JX312692 AFQ55782;YP_008080750 REVIEWED 8791834 protein-coding Eid1 EP300 interacting inhibitor of differentiation 1 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Mesothelioma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 5066042 5067747 - 102010555 AGCD01009307;GBBH01031729;XM_005376696 XP_005376753 MODEL 8913280 pseudo LOC102005572 tRNA pseudouridine(38/39) synthase-like NW_004955409 17846564 17848790 + 102005572 AGCD01009800 MODEL 39131845 rrna 5S_rRNA 5S ribosomal RNA 8754892 protein-coding Cilk1 ciliogenesis associated kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); intracellular signal transduction (ortholog); intraciliary anterograde transport (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); asphyxiating thoracic dystrophy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); ciliary tip (ortholog) NW_004955411 2997726 3065106 + 102013150 AGCD01011530;AGCD01011531;AGCD01011532;AGCD01011533;GBDI01025878;XM_005377612;XM_013510736;XM_013510737;XM_013510738;XM_013510739 XP_005377669;XP_013366190;XP_013366191;XP_013366192;XP_013366193 MODEL 9029942 ncrna LOC102012781 uncharacterized LOC102012781 NW_004955506 899099 904521 - 102012781 AGCD01065240;GBCE01032246;XR_264316 MODEL 9003520 protein-coding Casp2 caspase 2 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to mechanical stimulus (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Autosomal Recessive Intellectual Developmental Disorder 80 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN caspase complex (ortholog); cytoplasm (ortholog); endopeptidase complex (ortholog) NW_004955494 353572 369207 - 102027080 AGCD01061376;GBCE01142312;XM_005405371;XM_013505017;XM_013505018 XP_005405428;XP_013360471;XP_013360472 MODEL 8864150 pseudo LOC102017645 cyclin-G1 pseudogene NW_004955466 9212833 9213709 + 102017645 AGCD01051031 MODEL 8850755 protein-coding Ergic3 ERGIC and golgi 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Developmental Disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955422 25884138 25893237 - 102010597 AGCD01023269;GBDF01008497;XM_005384790;XM_005384791 XP_005384847;XP_005384848 MODEL 39132036 rrna 5S_rRNA 5S ribosomal RNA 8830697 protein-coding Bsph1 binder of sperm protein homolog 1 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN sperm capacitation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog) NW_004955609 261937 266866 + 102013675 AGCD01077055;XM_005414937 XP_005414994 MODEL 9035916 pseudo LOC102004140 tRNA methyltransferase 10 homolog A pseudogene NW_004955453 3075154 3075940 - 102004140 AGCD01044648 MODEL 8969322 protein-coding Lims1 LIM zinc finger domain containing 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); zinc ion binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); focal adhesion (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955470 12142997 12158273 + 102008399 AGCD01052919;GBBH01209486;GBCQ01093053;XM_013522811 XP_013378265 MODEL 8770015 protein-coding Afap1l1 actin filament associated protein 1 like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955415 5079876 5140905 - 102026969 AGCD01015990;GBCE01008759;GBDK01009948;XM_005380616 XP_005380673 MODEL 8984267 protein-coding Adam23 ADAM metallopeptidase domain 23 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN glutamatergic synapse (ortholog); presynaptic membrane (ortholog); trans-synaptic protein complex (ortholog) NW_004955457 8362639 8518281 - 102028163 AGCD01046908;AGCD01046909;AGCD01046910;AGCD01046911;GBBH01008349;GBDJ01144488;XM_013520784;XM_013520785 XP_013376238;XP_013376239 MODEL 8702021 protein-coding Ankrd2 ankyrin repeat domain 2 ENCODES a protein that exhibits chromatin binding (ortholog); protein kinase B binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of myoblast differentiation (ortholog); negative regulation of myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955507 3678009 3686967 + 102028215 AGCD01065632;GBCQ01044645;XM_005407614;XR_264378 XP_005407671 MODEL 8716432 protein-coding Gdf11 growth differentiation factor 11 INVOLVED IN activin receptor signaling pathway (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955458 3388402 3398040 + 102026079 AGCD01047301;GBBH01160450;GBDJ01213704;XM_005397510 XP_005397567 MODEL 8766278 pseudo LOC102008146 DNA damage-regulated autophagy modulator protein 1 pseudogene NW_004955536 576531 579612 - 102008146 AGCD01070732 MODEL 39134347 misc_rna 7SK 7SK RNA 8712001 protein-coding Emp3 epithelial membrane protein 3 (MAM blood group) INVOLVED IN apoptotic process (ortholog); bleb assembly (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955559 2117200 2121366 - 102012480 AGCD01073691;GBDJ01005369;XM_005412959;XM_013509045 XP_005413016;XP_013364499 MODEL 8935291 protein-coding Ccdc24 coiled-coil domain containing 24 ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955537 3516502 3520559 + 102012025 AGCD01070960;GBDJ01061341;XM_005410706;XM_013507780;XM_013507781;XR_001232081 XP_005410763;XP_013363234;XP_013363235 MODEL 9068082 protein-coding LOC102010369 galectin-9-like NW_004955481 5706510 5744393 - 102010369 AGCD01057000;AGCD01057001;AGCD01057002;GBCE01150879;XM_013503348;XM_013503349 XP_013358802;XP_013358803 MODEL 9051664 protein-coding Gpx2 glutathione peroxidase 2 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); negative regulation of inflammatory response to antigenic stimulus (ortholog); response to salicylic acid (ortholog); ASSOCIATED WITH alcoholic gastritis (ortholog); autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955466 4983532 4987780 + 102025776 AGCD01050864;GBCB01103114;XM_005399115 XP_005399172 MODEL 8960134 protein-coding Ifngr1 interferon gamma receptor 1 ENCODES a protein that exhibits type II interferon receptor activity (ortholog); INVOLVED IN astrocyte activation (ortholog); defense response to virus (ortholog); microglial cell activation (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); arteriosclerosis (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955436 22183318 22199013 + 102019637 AGCD01034087;GBCE01075143;XM_005389280 XP_005389337 MODEL 9029231 protein-coding Il2ra interleukin 2 receptor subunit alpha ENCODES a protein that exhibits interleukin-2 binding (ortholog); interleukin-2 receptor activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); interleukin-2 receptor complex (ortholog) NW_004955421 22642004 22694729 - 102029977 AGCD01022143;AGCD01022144;AGCD01022145;AGCD01022146;GBDJ01194803;XM_005383859;XM_005383860;XM_013513633 XP_005383916;XP_005383917;XP_013369087 MODEL 8771385 protein-coding Cenpl centromere protein L ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN inner kinetochore (ortholog) NW_004955406 13949697 13963827 - 102007968 AGCD01005955;AGCD01005956;GBDI01246384;XM_005374873 XP_005374930 MODEL 8708100 protein-coding Aldh3a2 aldehyde dehydrogenase 3 family member A2 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); farnesal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); central nervous system development (ortholog); epidermis development (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955467 141592 162376 - 102024986 AGCD01051211;GBCB01005261;XM_005399257;XM_005399258 XP_005399314;XP_005399315 MODEL 8713747 protein-coding Clptm1 CLPTM1 regulator of GABA type A receptor forward trafficking ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN inhibitory chemical synaptic transmission (ortholog); memory (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); GABA-ergic synapse (ortholog) NW_004955555 2029591 2056321 + 102029671 AGCD01073126;GBDF01005692;XM_005412483 XP_005412540 MODEL 8766503 protein-coding Fbxo47 F-box protein 47 ASSOCIATED WITH high grade glioma (ortholog); melanoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955451 13939786 13967049 - 102018459 AGCD01043514;AGCD01043515;AGCD01043516;AGCD01043517;AGCD01043518;GBDF01157498;XM_013519121 XP_013374575 MODEL 9050250 protein-coding Trim7 tripartite motif containing 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) NW_004955530 119088 128353 + 102003481 AGCD01069830;GBDK01397066;XM_005410097;XM_005410098 XP_005410154;XP_005410155 MODEL 8999441 protein-coding Cdca7 cell division cycle associated 7 ENCODES a protein that exhibits hemi-methylated DNA-binding (ortholog); INVOLVED IN regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955449 1912125 1923026 - 102010320 AGCD01041816;GBDJ01163685;XM_005393197;XM_005393198;XM_005393200 XP_005393254;XP_005393255;XP_005393257 MODEL 8920227 protein-coding E2f5 E2F transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 3131282 3155872 + 102003545 AGCD01017904;AGCD01017905;GBCE01129791;XM_005381740 XP_005381797 MODEL 39133912 misc_rna 7SK 7SK RNA 8772544 protein-coding Cfl2 cofilin 2 ENCODES a protein that exhibits actin filament binding (ortholog); actin filament severing activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); muscle cell cellular homeostasis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN I band (ortholog); Z disc (ortholog) NW_004955409 26247050 26250082 + 102006429 AGCD01010166;GBDF01004915;GBDJ01086349;XM_013510377 XP_013365831 MODEL 8793972 protein-coding LOC102009615 translation initiation factor IF-2-like NW_004955420 29366247 29393153 - 102009615 AGCD01021498;AGCD01021499;GBBH01125290;XM_013513409;XR_001233708 XP_013368863 MODEL 8911885 protein-coding LOC102006625 ankyrin repeat domain-containing protein 26-like NW_004955582 71374 168669 + 102006625 AGCD01075741;AGCD01075742;AGCD01075743;AGCD01075744;AGCD01075745;AGCD01075746;AGCD01075747;GBDF01000111;XM_005414285 XP_005414342 MODEL 9001528 protein-coding Col16a1 collagen type XVI alpha 1 chain ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955452 10062409 10111778 - 102011499 AGCD01044268;AGCD01044269;GBDF01085242;XM_013519638;XM_013519639;XM_013519640;XM_013519641 XP_013375092;XP_013375093;XP_013375094;XP_013375095 MODEL 8946843 pseudo LOC102004504 14-3-3 protein theta pseudogene NW_004955429 23815798 23816541 + 102004504 AGCD01029080;XM_005387222 MODEL 8830632 protein-coding Kcnj11 potassium inwardly rectifying channel subfamily J member 11 ENCODES a protein that exhibits ankyrin binding (ortholog); ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); apoptotic process (ortholog); CAMKK-AMPK signaling cascade (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; altered insulin secretion pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Ataxia (ortholog); atopic dermatitis (ortholog); FOUND IN acrosomal vesicle (ortholog); axolemma (ortholog); cell body fiber (ortholog) NW_004955414 32209426 32212424 - 102010147 AGCD01015777;GBCB01005982;XM_005380384 XP_005380441 MODEL 8955525 protein-coding Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ENCODES a protein that exhibits cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); cholesterol catabolic process (ortholog); liver regeneration (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholestasis (ortholog); congenital bile acid synthesis defect (ortholog); FOUND IN lipid droplet (ortholog) NW_004955493 7835160 7838428 + 102025133 AGCD01061229;GBCQ01033335;XM_005405287;XM_005405288 XP_005405344;XP_005405345 MODEL 8777602 protein-coding Ivns1abp influenza virus NS1A binding protein INVOLVED IN negative regulation of intrinsic apoptotic signaling pathway (ortholog); negative regulation of protein ubiquitination (ortholog); response to virus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955406 23866705 23881184 - 102009911 AGCD01006186;GBCQ01040029;XM_013521711;XM_013521714;XM_013521717 XP_013377165;XP_013377168;XP_013377171 MODEL 8746347 protein-coding Emsy EMSY transcriptional repressor, BRCA2 interacting ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); asthma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 15395851 15482490 - 102015398 AGCD01015184;AGCD01015185;AGCD01015186;GBDK01013488;XM_005379854;XM_005379859;XM_005379860;XM_005379861;XM_005379865;XM_013511858;XM_013511859;XM_013511860;XM_013511861;XM_013511862;XM_013511863;XM_013511864;XM_013511865;XM_013511866;XM_013511867;XM_013511868;XM_013511869;XM_013511870;XM_013511871;XR_001233129;XR_001233130 XP_005379911;XP_005379916;XP_005379917;XP_005379918;XP_005379922;XP_013367312;XP_013367313;XP_013367314;XP_013367315;XP_013367316;XP_013367317;XP_013367318;XP_013367319;XP_013367320;XP_013367321;XP_013367322;XP_013367323;XP_013367324;XP_013367325 MODEL 8890431 protein-coding Cacna1f calcium voltage-gated channel subunit alpha1 F ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN axonogenesis (ortholog); dendrite morphogenesis (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Aland Island eye disease (ortholog); amblyopia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN membrane (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) NW_004955543 692035 717364 - 102009879 AGCD01071599;GBDK01363496;XM_013508152 XP_013363606 MODEL 39131846 rrna 5S_rRNA 5S ribosomal RNA 8908862 pseudo LOC102007015 chromobox protein homolog 3 pseudogene NW_004955419 1378119 1378641 + 102007015 AGCD01019647 MODEL 8820164 pseudo LOC102003804 thyrotropin-releasing hormone receptor-like NW_004955541 2505471 2509425 - 102003804 AGCD01071413 MODEL 8723359 pseudo LOC102011156 glutathione S-transferase alpha-3 pseudogene NW_004955446 4760282 4767429 + 102011156 AGCD01040045 MODEL 8961768 protein-coding Cilp cartilage intermediate layer protein ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); dinucleotide phosphatase activity (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of insulin-like growth factor receptor signaling pathway (ortholog); negative regulation of SMAD protein signal transduction (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); clear cell renal cell carcinoma (ortholog); Intervertebral Disc Disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955450 10231082 10244632 + 102008046 AGCD01042609;GBDF01251243;XM_005393721 XP_005393778 MODEL 8733024 protein-coding LOC102011570 olfactory receptor 10AG1-like NW_004955511 924080 925039 - 102011570 AGCD01066346;XM_005408218 XP_005408275 MODEL 8807450 protein-coding Dhx36 DEAH-box helicase 36 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); DNA helicase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to arsenite ion (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955448 5634072 5676272 - 102012706 AGCD01041373;GBDJ01388906;XM_005393058;XM_013518656 XP_005393115;XP_013374110 MODEL 8800190 protein-coding Erh ERH mRNA splicing and mitosis factor ENCODES a protein that exhibits methyl-CpG binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); sarcoma (ortholog); FOUND IN methylosome (ortholog); midbody (ortholog); nucleus (ortholog) NW_004955466 960245 976449 + 102027958 AGCD01050685;AGCD01050686;GBBH01031291;XM_005399034 XP_005399091 MODEL 8926012 protein-coding LOC102004142 uncharacterized LOC102004142 NW_004955456 913644 917256 + 102004142 AGCD01046223;GBDF01177210;XM_005396878 XP_005396935 MODEL 8729472 pseudo LOC102009251 heterogeneous nuclear ribonucleoprotein D-like pseudogene NW_004955455 3817536 3818804 + 102009251 AGCD01045653;XR_262827 MODEL 8919122 protein-coding Adam28 ADAM metallopeptidase domain 28 ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); metallopeptidase activity (ortholog); ASSOCIATED WITH asbestos-related lung carcinoma (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955403 47304711 47409369 + 102020740 AGCD01002885;AGCD01002886;AGCD01002887;AGCD01002888;AGCD01002889;GBDF01020328;XM_005373705;XM_013514042;XM_013514049 XP_005373762;XP_013369496;XP_013369503 MODEL 8978301 protein-coding LOC102008154 fMet-Leu-Phe receptor NW_004955558 805352 810836 + 102008154 AGCD01073392;GBDK01070147;XM_005412671 XP_005412728 MODEL 8829663 protein-coding Ccr9 C-C motif chemokine receptor 9 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); INVOLVED IN CD8-positive, gamma-delta intraepithelial T cell differentiation (ortholog); chemotaxis (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog) NW_004955420 26083445 26093740 - 102004489 AGCD01021389;AGCD01021390;GBDJ01403664;XM_005383463;XM_005383464 XP_005383520;XP_005383521 MODEL 10221485 ncrna LOC106149932 uncharacterized LOC106149932 NW_004955458 15456971 15460710 - 106149932 AGCD01047892;GBDI01106016;XR_001236428 MODEL 9019007 ncrna LOC102021747 uncharacterized LOC102021747 NW_004955467 2672508 2696145 - 102021747 AGCD01051319;GBDF01160694;XR_001236840;XR_001236841 MODEL 9014291 pseudo LOC102008506 nucleoplasmin-3 pseudogene NW_004955409 22543962 22544416 - 102008506 AGCD01010041 MODEL 8932382 ncrna LOC102012784 uncharacterized LOC102012784 NW_004955428 17863566 17878885 + 102012784 AGCD01028052;GBCQ01167239;XR_261304 MODEL 8785922 protein-coding Adam29 ADAM metallopeptidase domain 29 INVOLVED IN energy homeostasis (ortholog); gene expression (ortholog); respiratory system process (ortholog); ASSOCIATED WITH high grade glioma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN external side of plasma membrane (ortholog); sperm head plasma membrane (ortholog) NW_004955403 32233940 32257782 - 102020404 AGCD01002432;AGCD01002433;GBDF01002252;XM_005373528;XM_005373529;XM_013515226;XM_013515229 XP_005373585;XP_005373586;XP_013370680;XP_013370683 MODEL 8713550 protein-coding Gpx3 glutathione peroxidase 3 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); identical protein binding (ortholog); mercury ion binding (ortholog); INVOLVED IN hydrogen peroxide catabolic process (ortholog); response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); response to corticosterone (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 2622162 2629088 - 102019030 AGCD01008015;GBCQ01000317;XM_005376065 XP_005376122 MODEL 8951949 protein-coding Il2rb interleukin 2 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-15-mediated signaling pathway (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); interleukin-15 receptor complex (ortholog) NW_004955413 23623567 23640245 - 102028734 AGCD01014333;GBDI01139428;XM_005379192 XP_005379249 MODEL 8862710 protein-coding Cenpm centromere protein M ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN inner kinetochore (ortholog) NW_004955413 27349283 27360052 - 102027395 AGCD01014503;GBCQ01091357;XM_005379379;XM_005379381;XM_005379382;XM_013511269;XM_013511270 XP_005379436;XP_005379438;XP_005379439;XP_013366723;XP_013366724 MODEL 39134046 misc_rna 7SK 7SK RNA 39132037 rrna 5S_rRNA 5S ribosomal RNA 39133760 misc_rna 7SK 7SK RNA 8707537 protein-coding Bspry B-box and SPRY domain containing INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955419 14124167 14139181 - 102027074 AGCD01020012;GBCE01170004;GBDI01012219;XM_013513135 XP_013368589 MODEL 8962888 protein-coding Gdf15 growth differentiation factor 15 ENCODES a protein that exhibits cytokine activity (ortholog); hormone activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to chemical stress (ortholog); energy homeostasis (ortholog); GDF15-GFRAL signaling pathway (ortholog); ASSOCIATED WITH anemia (ortholog); Cachexia (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955524 3123513 3125642 - 102022734 AGCD01068859;GBDJ01263083;XM_005409571 XP_005409628 MODEL 39134348 misc_rna 7SK 7SK RNA 9000249 protein-coding Afap1l2 actin filament associated protein 1 like 2 ENCODES a protein that exhibits protein tyrosine kinase activator activity (ortholog); SH2 domain binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN inflammatory response (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955431 19275257 19378507 - 102017045 AGCD01030447;AGCD01030448;GBBH01150926;GBDI01098533;XM_005387827 XP_005387884 MODEL 8718917 protein-coding Lims2 LIM zinc finger domain containing 2 INVOLVED IN cell-cell adhesion (ortholog); cell-cell junction organization (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2W (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN focal adhesion (ortholog) NW_004955459 2874282 2913956 + 102027722 AGCD01048004;GBCB01111199;XM_005397601;XM_005397602;XM_005397604;XM_013521048 XP_005397658;XP_005397659;XP_005397661;XP_013376502 MODEL 8871221 pseudo LOC102010370 tax1-binding protein 1 homolog NW_004955418 30088883 30095400 + 102010370 AGCD01019503 MODEL 8936849 pseudo LOC102005573 peroxiredoxin-1 pseudogene NW_004955410 34010516 34011152 - 102005573 AGCD01011394 MODEL 8974021 protein-coding Eid2 EP300 interacting inhibitor of differentiation 2 ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955468 29927 32947 + 102012945 AGCD01051675;AGCD01051676;GBCQ01164995;XM_005400282 XP_005400339 MODEL 9018592 protein-coding Ccdc25 coiled-coil domain containing 25 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN endomembrane system (ortholog); plasma membrane (ortholog) NW_004955403 50268490 50304033 - 102008490 AGCD01002962;AGCD01002963;AGCD01002964;GBDF01006328;XM_005373756;XM_013514313 XP_005373813;XP_013369767 MODEL 8786808 protein-coding Abtb3 ankyrin repeat and BTB domain containing 3 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN exploration behavior (ortholog); protein stabilization (ortholog); synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955405 41123136 41299803 + 102026939 AGCD01005541;AGCD01005542;AGCD01005543;AGCD01005544;AGCD01005545;AGCD01005546;GBBH01021992;XM_005374637;XM_005374638;XM_005374639 XP_005374694;XP_005374695;XP_005374696 MODEL 8712526 protein-coding Clptm1l CLPTM1 like ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955504 677824 695660 - 102007920 AGCD01064826;GBBH01064845;XM_005407055;XM_005407056 XP_005407112;XP_005407113 MODEL 39133913 misc_rna 7SK 7SK RNA 8822405 protein-coding E2f6 E2F transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 6014476 6029090 - 102006035 AGCD01059351;AGCD01059352;GBCB01002827;XM_005404425 XP_005404482 MODEL 8756415 protein-coding Ankrd22 ankyrin repeat domain 22 INVOLVED IN calcium ion import (ortholog); cell population proliferation (ortholog); immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955425 4123004 4149484 + 102020463 AGCD01025310;GBDK01380102;XM_013514893 XP_013370347 MODEL 8793483 protein-coding Cflar CASP8 and FADD like apoptosis regulator ENCODES a protein that exhibits death receptor binding (ortholog); enzyme activator activity (ortholog); peptidase activator activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Carotid Artery Injuries (ortholog); congestive heart failure (ortholog); FOUND IN caspase complex (ortholog); CD95 death-inducing signaling complex (ortholog); cytoplasm (ortholog) NW_004955403 415092 442214 - 102021722 AGCD01001691;GBCE01120410;XM_005373203;XM_005373204;XM_005373205;XM_005373206;XM_005373208;XM_013511733;XM_013511737;XM_013511739;XM_013511740 XP_005373260;XP_005373261;XP_005373262;XP_005373263;XP_005373265;XP_013367187;XP_013367191;XP_013367193;XP_013367194 MODEL 9015050 ncrna LOC102004514 uncharacterized LOC102004514 NW_004955527 2177694 2179801 + 102004514 AGCD01069423;GBBH01097112;XR_264674 MODEL 8795497 ncrna LOC102009616 uncharacterized LOC102009616 NW_004955487 8301569 8308007 + 102009616 AGCD01059433;GBDF01280847;XR_263987 MODEL 9017093 protein-coding LOC102006633 keratin-associated protein 20-2-like NW_004955407 30151533 30151730 + 102006633 AGCD01007628;XM_005375639 XP_005375696 MODEL 9004375 protein-coding Atp6ap1 ATPase H+ transporting accessory protein 1 ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); molecular function activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to increased oxygen levels (ortholog); endosome to plasma membrane protein transport (ortholog); ASSOCIATED WITH Ascites (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); endosome membrane (ortholog) NW_004955580 927546 934633 + 102030685 AGCD01075630;GBDF01086635;XM_005414198 XP_005414255 MODEL 8997263 ncrna LOC102009252 uncharacterized LOC102009252 NW_004955407 17252038 17275416 - 102009252 AGCD01007243;AGCD01007244;AGCD01007245;AGCD01007246;GBDF01238047;XR_001231027;XR_259564;XR_259565 MODEL 8794334 protein-coding Apoa1 apolipoprotein A1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein A-I receptor binding (ortholog); apolipoprotein receptor binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta formation (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; forkhead class A signaling pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Acute Tubulointerstitial Nephritis (ortholog); adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); discoidal high-density lipoprotein particle (ortholog) NW_004955412 18170331 18172298 - 102023342 AGCD01012927;GBDJ01086480;XM_005378193 P0DMS2;XP_005378250 MODEL 8812616 protein-coding LOC102008157 vomeronasal type-2 receptor 116-like NW_004955563 100634 120790 - 102008157 AGCD01074043;AGCD01074044;AGCD01074045;AGCD01074046;GBDF01162776;XM_013509122 XP_013364576 MODEL 8714139 protein-coding LOC102017650 Fc receptor-like protein 3 NW_004955468 9539939 9611259 - 102017650 AGCD01052049;AGCD01052050;GBDI01278495;XM_005400124;XM_005400128;XM_013522495;XM_013522496;XM_013522497 XP_005400181;XP_005400185;XP_013377949;XP_013377950;XP_013377951 MODEL 8910318 ncrna LOC102008507 uncharacterized LOC102008507 NW_004955410 6953396 6959673 - 102008507 AGCD01010708;GBDF01017313;XR_259822 MODEL 8931768 protein-coding Iws1 interacts with SUPT6H, CTD assembly factor 1 INVOLVED IN chromatin remodeling (ortholog); gene expression (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955459 3021320 3063363 + 102029941 AGCD01048006;AGCD01048007;GBDI01188072;XM_005397606;XM_005397607;XM_005397608;XM_013521080;XR_263010 XP_005397663;XP_005397664;XP_005397665;XP_013376534 MODEL 8960200 protein-coding LOC102021748 putative olfactory receptor 10D4 NW_004955412 24699372 24700304 + 102021748 AGCD01013121;XM_005378634 XP_005378691 MODEL 8968114 protein-coding Aldh3b1 aldehyde dehydrogenase 3 family member B1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN aldehyde catabolic process (ortholog); cellular response to oxidative stress (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955422 17786495 17801014 - 102008116 AGCD01022932;GBDI01017322;XM_005384290;XM_005384291 XP_005384347;XP_005384348 MODEL 8900987 protein-coding Emx1 empty spiracles homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); brain morphogenesis (ortholog); cerebral cortex development (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955424 12666280 12683023 - 102021025 AGCD01024617;GBCQ01035827;XM_005385579 XP_005385636 MODEL 8910197 protein-coding Cacna1g calcium voltage-gated channel subunit alpha1 G ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); scaffold protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN action potential (ortholog); artery smooth muscle contraction (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH absence epilepsy (ortholog); anxiety disorder (ortholog); bipolar disorder (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955451 11136885 11194321 - 102004345 AGCD01043342;GBDK01097835;XM_005394133;XM_005394135;XM_005394137;XM_005394138;XM_005394139;XM_005394142;XM_005394143;XM_005394144;XM_005394146;XM_005394148;XM_005394149;XM_005394152;XM_005394154;XM_013519070;XM_013519071;XM_013519072;XM_013519073;XM_013519074;XM_013519075;XM_013519076;XM_013519077;XM_013519078;XM_013519079;XM_013519081 XP_005394190;XP_005394192;XP_005394194;XP_005394195;XP_005394196;XP_005394199;XP_005394200;XP_005394201;XP_005394203;XP_005394205;XP_005394206;XP_005394209;XP_005394211;XP_013374524;XP_013374525;XP_013374526;XP_013374527;XP_013374528;XP_013374529;XP_013374530;XP_013374531;XP_013374532;XP_013374533;XP_013374535 MODEL 9058793 protein-coding Fbxo48 F-box protein 48 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955424 16449166 16455034 + 102020815 AGCD01024741;GBDI01279808;XM_005385663;XM_013514733;XM_013514734;XM_013514735;XM_013514736;XM_013514737 XP_005385720;XP_013370187;XP_013370188;XP_013370189;XP_013370190;XP_013370191 MODEL 8737570 protein-coding LOC102011157 olfactory receptor 2B11-like NW_004955576 1315227 1322081 + 102011157 AGCD01075372;XM_005413952 XP_005414009 MODEL 8797223 protein-coding Trim71 tripartite motif containing 71 ENCODES a protein that exhibits miRNA binding (ortholog); translation repressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH congenital hydrocephalus (ortholog); congenital hydrocephalus 4 (ortholog); COVID-19 (ortholog); FOUND IN P-body (ortholog) NW_004955421 97130 174326 + 102026436 AGCD01021547;AGCD01021548;AGCD01021549;AGCD01021550;GBDF01285530;XM_013513644 XP_013369098 MODEL 9011051 pseudo LOC102011574 polyadenylate-binding protein 1 pseudogene NW_004955516 4984024 4988135 + 102011574 AGCD01067543 MODEL 9066802 protein-coding Il2rg interleukin 2 receptor subunit gamma ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular homeostasis (ortholog); interleukin-15-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH combined immunodeficiency (ortholog); combined T cell and B cell immunodeficiency (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); interleukin-15 receptor complex (ortholog) NW_004955475 10676592 10680565 - 102028412 AGCD01055108;AGCD01055109;GBBH01142524;GBDI01064080;XM_013502895 XP_013358349 MODEL 8715969 protein-coding LOC102004144 palladin-like NW_004955408 32788476 32810588 + 102004144 AGCD01008854;AGCD01008855;GBDF01234212;XM_005376593 XP_005376650 MODEL 8846529 protein-coding Cilp2 cartilage intermediate layer protein 2 ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); dinucleotide phosphatase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog) NW_004955524 2414502 2421166 - 102014822 AGCD01068817;GBDJ01042634;XM_005409640 XP_005409697 MODEL 8797503 protein-coding Eri1 exoribonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); exoribonuclease II activity (ortholog); histone pre-mRNA stem-loop binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); maturation of 5.8S rRNA (ortholog); rRNA 3'-end processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH amenorrhea (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); histone pre-mRNA 3'end processing complex (ortholog); nucleolus (ortholog) NW_004955463 5074921 5104341 + 102006224 AGCD01049629;AGCD01049630;AGCD01049631;AGCD01049632;GBBH01198207;XM_013521560 XP_013377014 MODEL 8774190 protein-coding Col17a1 collagen type XVII alpha 1 chain INVOLVED IN hemidesmosome assembly (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); amelogenesis imperfecta (ortholog); FOUND IN hemidesmosome (ortholog); plasma membrane (ortholog) NW_004955485 6568178 6616972 + 102027414 AGCD01058622;GBCQ01145638;XM_005403792;XM_013504102 XP_005403849;XP_013359556 MODEL 8715803 protein-coding Ccrl2 C-C motif chemokine receptor like 2 ENCODES a protein that exhibits CCR chemokine receptor binding (ortholog); chemokine receptor binding (ortholog); INVOLVED IN inflammatory response (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); COVID-19 (ortholog); skin disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 25613632 25616770 - 102026644 AGCD01021367;GBDK01185255;XM_005383444;XM_013513477;XM_013513478;XM_013513479 XP_005383501;XP_013368931;XP_013368932;XP_013368933 MODEL 8799297 protein-coding Hsdl1 hydroxysteroid dehydrogenase like 1 ENCODES a protein that exhibits steroid dehydrogenase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955564 155080 172712 + 102020063 AGCD01074188;GBDI01267692;XM_005413224;XM_005413226;XM_013509205 XP_005413281;XP_005413283;XP_013364659 MODEL 39131847 rrna 5S_rRNA 5S ribosomal RNA 9026791 protein-coding Casp3 caspase 3 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN response to auditory stimulus; anterior neural tube closure (ortholog); apoptotic process (ortholog); PARTICIPATES IN apoptotic cell death pathway; extrinsic apoptotic pathway; FasL mediated signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN caspase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 24315712 24326271 + 102005331 AGCD01002272;GBBH01076760;GBDF01076734;XM_013513062 XP_013368516 MODEL 8984121 protein-coding Kcnj12 potassium inwardly rectifying channel subfamily J member 12 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN potassium ion transport (ortholog); protein homotetramerization (ortholog); PARTICIPATES IN neuron-to-neuron signaling pathway via the chemical synapse; ASSOCIATED WITH Disease Progression (ortholog); Lymphatic Metastasis (ortholog); urinary bladder cancer (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); neuronal cell body (ortholog) NW_004955577 1348350 1359300 + 102024066 AGCD01075448;GBDI01357774;XM_005413992;XM_005413993;XM_013509641 XP_005414049;XP_005414050;XP_013365095 MODEL 8702178 ncrna LOC102003807 uncharacterized LOC102003807 NW_004955546 1036841 1042659 - 102003807 AGCD01072038;GBDF01208163;XR_264887 MODEL 8724588 protein-coding LOC102007016 2'-5'-oligoadenylate synthase 1-like NW_004955482 9316087 9321788 + 102007016 AGCD01057564;AGCD01057565;GBBH01096422;GBDI01244956;XM_013503740 XP_013359194 MODEL 8931662 protein-coding Adam32 ADAM metallopeptidase domain 32 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); sperm principal piece (ortholog) NW_004955536 3352117 3482742 - 102020484 AGCD01070820;AGCD01070821;AGCD01070822;AGCD01070823;AGCD01070824;GBDF01043201;XM_013507724 XP_013363178 MODEL 8942112 protein-coding Cdca7l cell division cycle associated 7 like INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955410 24353024 24366987 - 102005680 AGCD01011126;GBBH01051851;GBDI01216639;XM_013510578;XM_013510579;XM_013510580 XP_013366032;XP_013366033;XP_013366034 MODEL 8726779 protein-coding Acaa2 acetyl-CoA acyltransferase 2 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); acetyl-CoA C-acyltransferase activity (ortholog); acetyl-CoA hydrolase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to hypoxia (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); basal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955402 34857317 34885169 - 102014845 AGCD01000872;AGCD01000873;GBDJ01085210;XM_005372912;XM_013510632 XP_005372969;XP_013366086 MODEL 8987205 pseudo LOC102021750 40S ribosomal protein S15a pseudogene NW_004955469 6142084 6142956 + 102021750 AGCD01052365 MODEL 8857582 protein-coding Gpx4 glutathione peroxidase 4 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); identical protein binding (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); arachidonate metabolic process (ortholog); cerebellum development (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Binge Drinking (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955495 6767969 6772256 - 102011883 AGCD01062090;AGCD01062091;AGCD01062092;GBDF01008530;XM_005405994 XP_005406051 MODEL 8868452 protein-coding Cenpn centromere protein N ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN inner kinetochore (ortholog); nucleoplasm (ortholog) NW_004955522 3801856 3818675 + 102028329 AGCD01068398;GBDF01120914;XM_005409347;XM_005409348 XP_005409404;XP_005409405 MODEL 39134047 misc_rna 7SK 7SK RNA 39133914 misc_rna 7SK 7SK RNA 39132038 rrna 5S_rRNA 5S ribosomal RNA 39133761 misc_rna 7SK 7SK RNA 8861464 protein-coding Dhx37 DEAH-box helicase 37 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); U3 snoRNA binding (ortholog); INVOLVED IN brain development (ortholog); positive regulation of male gonad development (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); Anorchia (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleolus (ortholog) NW_004955482 4733720 4754754 + 102008853 AGCD01057307;AGCD01057308;GBCE01154824;XM_005403001 XP_005403058 MODEL 8940320 protein-coding Bst1 bone marrow stromal cell antigen 1 ENCODES a protein that exhibits NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); regulation of actin cytoskeleton organization (ortholog); regulation of calcium-mediated signaling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, cyclic ribosylation; niacin metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); uropod (ortholog) NW_004955480 8273887 8304127 - 102015953 AGCD01056717;AGCD01056718;GBDJ01403584;XM_005402522 XP_005402579 MODEL 39134349 misc_rna 7SK 7SK RNA 9002438 protein-coding Gdf2 growth differentiation factor 2 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); angiogenesis (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); hepatocellular carcinoma (ortholog); hereditary hemorrhagic telangiectasia (ortholog); FOUND IN extracellular region (ortholog) NW_004955556 2204841 2210335 + 102013975 AGCD01073208;XM_005412612 XP_005412669 MODEL 8864367 protein-coding Ankrd23 ankyrin repeat domain 23 ENCODES a protein that exhibits titin binding (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); regulation of sarcomere organization (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); congestive heart failure (ortholog); diastolic heart failure (ortholog); FOUND IN I band (ortholog); intercalated disc (ortholog); myofibril (ortholog) NW_004955470 4195872 4200979 - 102023252 AGCD01052728;GBDI01118906;XM_005400683 XP_005400740 MODEL 8983867 pseudo LOC102009624 nuclear receptor-binding factor 2 pseudogene NW_004955495 3092379 3093300 + 102009624 AGCD01061822 MODEL 8720435 ncrna LOC102010374 uncharacterized LOC102010374 NW_004955487 1473174 1486730 + 102010374 AGCD01059246;GBDF01209774;XR_263982 MODEL 9022240 protein-coding Afdn afadin, adherens junction formation factor ENCODES a protein that exhibits actin filament binding (ortholog); cell adhesion molecule binding (ortholog); LIM domain binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); bicellular tight junction assembly (ortholog); brain morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) NW_004955439 14324910 14428846 - 102019642 AGCD01035973;GBCB01061375;XM_013517333;XM_013517334;XM_013517335;XM_013517336;XM_013517337;XM_013517338;XM_013517339;XM_013517340;XM_013517341;XM_013517342;XM_013517343;XM_013517344;XM_013517345;XM_013517346;XM_013517347;XM_013517348;XM_013517349 XP_013372787;XP_013372788;XP_013372789;XP_013372790;XP_013372791;XP_013372792;XP_013372793;XP_013372794;XP_013372795;XP_013372796;XP_013372797;XP_013372798;XP_013372799;XP_013372800;XP_013372801;XP_013372802;XP_013372803 MODEL 9056945 protein-coding Atp6ap1l ATPase H+ transporting accessory protein 1 like ASSOCIATED WITH Breast Neoplasms (ortholog) NW_004955418 28077388 28106183 - 102005143 AGCD01019427;AGCD01019428;GBCQ01152832;GBCQ01152833;XM_013513053;XM_013513055;XM_013513056;XM_013513057;XM_013513058;XM_013513059 XP_013368507;XP_013368509;XP_013368510;XP_013368511;XP_013368512;XP_013368513 MODEL 8968751 pseudo LOC102008511 transmembrane protein 14A pseudogene NW_004955464 11151367 11152100 - 102008511 AGCD01050137;XR_263212 MODEL 8955503 protein-coding Ccdc27 coiled-coil domain containing 27 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); lung cancer (ortholog) NW_004955486 7895376 7907678 - 102024913 AGCD01059139;GBDF01125652;XM_005404140;XM_013504198;XM_013504199;XR_001231107 XP_005404197;XP_013359652;XP_013359653 MODEL 8973175 protein-coding E2f7 E2F transcription factor 7 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); hepatocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955405 16148640 16187272 - 102015172 AGCD01004963;GBDF01076465;XM_005374349;XM_005374351;XM_013517776 XP_005374406;XP_005374408;XP_013373230 MODEL 8739851 protein-coding Il31 interleukin 31 ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); oncostatin-M receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955482 6387289 6389361 + 102029864 AGCD01057390;GBDF01063375;XM_005403253 XP_005403310 MODEL 8756050 ncrna LOC102004516 uncharacterized LOC102004516 NW_004955436 16301782 16314045 + 102004516 AGCD01033912;GBDF01159287;XR_261792 MODEL 9050973 pseudo LOC102005574 ATP-binding cassette sub-family F member 2-like NW_004955463 4656863 4661099 + 102005574 AGCD01049614 MODEL 8995804 protein-coding Ifngr2 interferon gamma receptor 2 ENCODES a protein that exhibits type II interferon receptor activity (ortholog); INVOLVED IN defense response to virus (ortholog); microglial cell activation (ortholog); positive regulation of glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); allergic asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955407 32846927 32863155 + 102015925 AGCD01007685;GBCB01022004;GBDK01022293;XM_013504273 XP_013359727 MODEL 10249118 ncrna LOC106149933 uncharacterized LOC106149933 NW_004955458 12709287 12721892 - 106149933 AGCD01047788;GBCB01068735;XR_001236429;XR_001236430 MODEL 8825629 protein-coding LOC102008160 zinc finger protein 709-like NW_004955569 1635173 1644301 + 102008160 AGCD01074673;GBDF01011195;XM_005413505 XP_005413562 MODEL 8843833 protein-coding Col18a1 collagen type XVIII alpha 1 chain ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); endothelial cell morphogenesis (ortholog); extracellular matrix organization (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH angiosarcoma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog) NW_004955407 42091211 42131343 + 102012831 AGCD01007885;GBDJ01003015;XM_005375912;XM_005375913;XM_005375915 XP_005375969;XP_005375970;XP_005375972 MODEL 8891255 protein-coding Apoa2 apolipoprotein A2 ENCODES a protein that exhibits apolipoprotein receptor binding (ortholog); cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to lipoprotein particle stimulus (ortholog); cholesterol efflux (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH APOLIPOPROTEIN A-II DEFICIENCY (ortholog); coronary artery disease (ortholog); Diabetic Nephropathies (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); high-density lipoprotein particle (ortholog) NW_004955468 12977956 12979282 - 102007646 AGCD01052194;GBDF01236482;XM_005400270 XP_005400327 MODEL 8867796 pseudo LOC102017656 phosphatase and actin regulator 2 pseudogene NW_004955475 5638964 5641638 - 102017656 AGCD01054924 MODEL 8919494 protein-coding Iyd iodotyrosine deiodinase ENCODES a protein that exhibits FMN binding (ortholog); iodotyrosine deiodinase activity (ortholog); INVOLVED IN thyroid hormone metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955439 10998797 11060078 - 102005418 AGCD01035890;AGCD01035891;GBDI01224509;XM_005390590;XM_013517319;XR_261977 XP_005390647;XP_013372773 MODEL 39131848 rrna 5S_rRNA 5S ribosomal RNA 8988444 protein-coding Aldh4a1 aldehyde dehydrogenase 4 family member A1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); L-glutamate gamma-semialdehyde dehydrogenase activity (ortholog); INVOLVED IN L-proline catabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955527 338593 369528 + 102016842 AGCD01069382;AGCD01069383;GBDF01128157;XM_005409797 XP_005409854 MODEL 8748231 ncrna LOC102011163 uncharacterized LOC102011163 NW_004955450 15153068 15157236 - 102011163 AGCD01042782;GBCB01071256;XR_001235830;XR_001235831 MODEL 9004427 ncrna LOC102003811 uncharacterized LOC102003811 NW_004955442 15113086 15113646 + 102003811 AGCD01037859;GBBH01035320;XR_262150 MODEL 8863296 protein-coding LOC102012785 histone H1x ENCODES a protein that exhibits structural constituent of chromatin (ortholog); INVOLVED IN chromosome condensation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955429 13671907 13673689 - 102012785 AGCD01028760;AGCD01028761;GBBH01032046;GBCE01001858;XM_005387002 XP_005387059 MODEL 8832391 protein-coding Cfp complement factor properdin INVOLVED IN complement activation, alternative pathway (ortholog); positive regulation of complement activation, alternative pathway (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); factor VIII deficiency (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic side of Golgi membrane (ortholog); extracellular region (ortholog); secretory granule (ortholog) NW_004955516 449993 455897 + 102015039 AGCD01067385;GBDJ01230368;XM_013506912;XM_013506913 XP_013362366;XP_013362367 MODEL 8753486 protein-coding Cdca8 cell division cycle associated 8 INVOLVED IN chromosome organization (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN chromocenter (ortholog); chromosome passenger complex (ortholog); chromosome, centromeric region (ortholog) NW_004955452 15486515 15501838 + 102013470 AGCD01044486;GBDF01085373;XM_005395215;XM_005395216;XM_013519695 XP_005395272;XP_005395273;XP_013375149 MODEL 8930458 protein-coding Trim72 tripartite motif containing 72 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN muscle organ development (ortholog); muscle system process (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); sarcolemma (ortholog) NW_004955493 8074521 8091611 + 102004173 AGCD01061260;AGCD01061261;AGCD01061262;AGCD01061263;GBCB01006024;XM_005405311;XM_005405312 XP_005405368;XP_005405369 MODEL 9019207 protein-coding Cenpo centromere protein O ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN inner kinetochore (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955469 6913438 6933254 + 102030295 AGCD01052399;GBBH01066882;XM_005400396 XP_005400453 MODEL 9013610 pseudo LOC102021752 histone acetyltransferase type B catalytic subunit pseudogene NW_004955471 1960041 1961237 - 102021752 AGCD01052994 MODEL 39134048 misc_rna 7SK 7SK RNA 9054931 protein-coding LOC102006635 keratin-associated protein 12-3-like NW_004955407 41624924 41625555 - 102006635 AGCD01007874;XM_013505462 XP_013360916 MODEL 9003289 protein-coding Eid2b EP300 interacting inhibitor of differentiation 2B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of myoblast differentiation (ortholog); FOUND IN nucleus (ortholog) NW_004955468 48573 50029 + 102019996 AGCD01051677;GBCQ01058768;XM_005399765 XP_005399822 MODEL 8760503 protein-coding LOC102009253 keratin-associated protein 20-2-like NW_004955407 30214295 30214462 + 102009253 AGCD01007628;XM_005375647 XP_005375704 MODEL 9021381 protein-coding Dhx38 DEAH-box helicase 38 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 4752834 4770843 + 102018097 AGCD01058232;GBDF01223379;XM_005403530 XP_005403587 MODEL 9036271 protein-coding Gdf3 growth differentiation factor 3 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN endoderm development (ortholog); eye development (ortholog); formation of anatomical boundary (ortholog); ASSOCIATED WITH Camptocormia (ortholog); congenital heart disease (ortholog); Edema (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955413 6493734 6516315 - 102018279 AGCD01013745;AGCD01013746;AGCD01013747;AGCD01013748;GBDF01173445;XM_013511291 XP_013366745 MODEL 9032996 pseudo LOC102010378 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955422 11267452 11268307 - 102010378 AGCD01022753 MODEL 9048436 protein-coding Hsdl2 hydroxysteroid dehydrogenase like 2 ENCODES a protein that exhibits steroid dehydrogenase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Liver Neoplasms (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955419 14899141 14974449 - 102004390 AGCD01020046;AGCD01020047;AGCD01020048;AGCD01020049;AGCD01020050;AGCD01020051;AGCD01020052;AGCD01020053;GBCQ01004568;XM_005382705;XM_013513304 XP_005382762;XP_013368758 MODEL 9014372 protein-coding Lin28a lin-28 RNA binding posttranscriptional regulator A ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); miRNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); germ cell development (ortholog); miRNA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); disease of cellular proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955452 5793583 5808662 + 102017624 AGCD01044055;GBDF01079508;XM_005394857 XP_005394914 MODEL 8877649 protein-coding Emx2 empty spiracles homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); colorectal cancer (ortholog); esophagus adenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955431 22192446 22199141 + 102030337 AGCD01030511;GBDF01112545;XM_005387875 XP_005387932 MODEL 8997181 ncrna LOC102007019 uncharacterized LOC102007019 NW_004955420 21387304 21399329 - 102007019 AGCD01021135;GBDK01343956;XR_260734 MODEL 8979575 protein-coding Fbxo5 F-box protein 5 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); molecular function inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN DNA damage response (ortholog); microtubule polymerization (ortholog); negative regulation of cellular senescence (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); meiotic spindle (ortholog); nucleoplasm (ortholog) NW_004955439 8830658 8843653 + 102026675 AGCD01035813;AGCD01035814;GBDF01287272;XM_005390570;XM_013517411 XP_005390627;XP_013372865 MODEL 8986610 protein-coding Casp6 caspase 6 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); acute inflammatory response to non-antigenic stimulus (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN axon (ortholog); caspase complex (ortholog); cytoplasm (ortholog) NW_004955496 575839 584287 + 102026232 AGCD01062235;GBDF01178103;XM_005406189;XM_013505399 XP_005406246;XP_013360853 MODEL 8713851 protein-coding Atp6ap2 ATPase H+ transporting accessory protein 2 INVOLVED IN angiotensin maturation (ortholog); central nervous system maturation (ortholog); eye pigmentation (ortholog); PARTICIPATES IN renin-angiotensin cascade pathway; ASSOCIATED WITH congenital disorder of glycosylation type IIr (ortholog); Craniofacial Abnormalities (ortholog); Fibrosis (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955565 2006154 2029921 - 102005522 AGCD01074337;AGCD01074338;AGCD01074339;GBCQ01011649;XM_005413271 XP_005413328 MODEL 8794011 ncrna LOC102011575 uncharacterized LOC102011575 NW_004955433 7112388 7165573 + 102011575 AGCD01031565;AGCD01031566;GBDF01115735;XR_001234705;XR_261564 MODEL 8897634 protein-coding Adam33 ADAM metallopeptidase domain 33 ASSOCIATED WITH asthma (ortholog); Breast Neoplasms (ortholog); Bronchial Hyperreactivity (ortholog) NW_004955415 14523517 14535701 - 102028291 AGCD01016300;GBCE01003714;XM_013512128 XP_013367582 MODEL 8809962 protein-coding Ccdc28a coiled-coil domain containing 28A INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955436 20849493 20875284 - 102015563 AGCD01034043;GBDF01003241;XM_005389270;XM_013516693;XM_013516694;XM_013516695;XM_013516696 XP_005389327;XP_013372147;XP_013372148;XP_013372149;XP_013372150 MODEL 8916597 protein-coding Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit X ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent peptidase activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH Erythropoietic Protoporphyria 2 (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN endopeptidase Clp complex (ortholog); mitochondrial endopeptidase Clp complex (ortholog); mitochondrial matrix (ortholog) NW_004955450 10256124 10289832 + 102008999 AGCD01042609;GBDF01006056;XM_005393725;XM_005393726 XP_005393782;XP_005393783 MODEL 8906530 protein-coding Gpx7 glutathione peroxidase 7 ENCODES a protein that exhibits catalase activity (ortholog); peroxidase activity (ortholog); ASSOCIATED WITH Barrett's adenocarcinoma (ortholog); Barrett's esophagus (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955464 6560198 6566763 - 102017106 AGCD01050031;AGCD01050032;GBCE01067129;XM_005398574 XP_005398631 MODEL 39131565 protein-coding CDCP1 CUB domain containing protein 1 9018113 protein-coding Trim8 tripartite motif containing 8 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); host-mediated suppression of symbiont invasion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); epilepsy (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955485 7784625 7798131 - 102013832 AGCD01058676;AGCD01058677;AGCD01058678;GBBH01035373;GBDK01003830;XM_005403830 XP_005403887 MODEL 8824553 protein-coding Ccs copper chaperone for superoxide dismutase ENCODES a protein that exhibits copper ion binding (ortholog); enzyme binding (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN positive regulation of oxidoreductase activity (ortholog); protein import into mitochondrial intermembrane space (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Chronic Hepatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial intermembrane space (ortholog) NW_004955422 18761703 18772762 - 102006785 AGCD01022960;GBDF01125416;XM_005384387;XM_005384388;XM_005384389;XM_013513909 XP_005384444;XP_005384445;XP_005384446;XP_013369363 MODEL 8776978 protein-coding LOC102008514 putative olfactory receptor 2B8 NW_004955465 13513122 13518306 - 102008514 AGCD01050613;GBDF01256300;XM_005398955;XM_013521794;XM_013521795 XP_005399012;XP_013377248;XP_013377249 MODEL 8890926 protein-coding Col19a1 collagen type XIX alpha 1 chain INVOLVED IN extracellular matrix organization (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955488 4984140 5288530 + 102025016 AGCD01059612;AGCD01059613;AGCD01059614;AGCD01059615;AGCD01059616;AGCD01059617;AGCD01059618;GBCB01127356;XM_013504411 XP_013359865 MODEL 8829137 protein-coding Acaca acetyl-CoA carboxylase alpha ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to prostaglandin E stimulus (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; Leigh disease pathway; malonic aciduria pathway; ASSOCIATED WITH Acetyl-Coa Carboxylase Deficiency (ortholog); acute myeloid leukemia (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog) NW_004955451 679033 909892 + 102024295 AGCD01042950;AGCD01042951;AGCD01042952;AGCD01042953;AGCD01042954;GBCQ01129882;GBDF01277014;XM_013519172 XP_013374626 MODEL 8995090 protein-coding LOC102017662 histone H4 NW_004955483 846605 850748 + 102017662 AGCD01057634;XM_013503799 XP_013359253 MODEL 39133915 misc_rna 7SK 7SK RNA 8979819 ncrna LOC102011164 uncharacterized LOC102011164 NW_004955403 2029851 2035069 + 102011164 AGCD01001728;GBDF01163401;XR_001233149;XR_001233150 MODEL 9045075 protein-coding Aldh5a1 aldehyde dehydrogenase 5 family member A1 ENCODES a protein that exhibits carboxylic acid binding (ortholog); identical protein binding (ortholog); NAD binding (ortholog); INVOLVED IN central nervous system development (ortholog); GABA catabolic process (ortholog); GABA shunt (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955483 2467425 2494416 - 102007230 AGCD01057678;GBCE01045506;GBCQ01039671;XM_005403428 XP_005403485 MODEL 39133762 misc_rna 7SK 7SK RNA 8774127 protein-coding Bsx brain specific homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eating behavior (ortholog); locomotory behavior (ortholog); mammary gland involution (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955412 23796973 23801479 - 102019787 AGCD01013095;XM_005378374 XP_005378431 MODEL 39132039 rrna 5S_rRNA 5S ribosomal RNA 39134350 misc_rna 7SK 7SK RNA 8751594 protein-coding E2f8 E2F transcription factor 8 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell cycle comprising mitosis without cytokinesis (ortholog); cell population proliferation (ortholog); chorionic trophoblast cell differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955476 197699 215227 - 102003762 AGCD01055192;GBDF01123925;XM_005401713;XM_005401714;XM_005401715;XM_013503012;XM_013503013 XP_005401770;XP_005401771;XP_005401772;XP_013358466;XP_013358467 MODEL 8847004 protein-coding LOC102004517 trace amine-associated receptor 7a-like NW_004955436 13040357 13041557 - 102004517 AGCD01033852;XM_013516593 XP_013372047 MODEL 8894742 protein-coding Il31ra interleukin 31 receptor A ENCODES a protein that exhibits cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955446 11857882 11963867 - 102014507 AGCD01040215;AGCD01040216;AGCD01040217;AGCD01040218;AGCD01040219;AGCD01040220;GBDK01269090;XM_005392690;XM_005392691;XM_013518468 XP_005392747;XP_005392748;XP_013373922 MODEL 39134049 misc_rna 7SK 7SK RNA 9014004 pseudo LOC102009626 U6 snRNA-associated Sm-like protein LSm6 pseudogene NW_004955423 13610988 13611230 + 102009626 AGCD01023749 MODEL 8811877 protein-coding LOC102005576 histone H2B NW_004955465 13104644 13110046 - 102005576 AGCD01050585;GBDF01248769;XM_005398947 XP_005399004 MODEL 8918152 protein-coding Eid3 EP300 interacting inhibitor of differentiation 3 FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955405 38897494 38898057 + 102011500 AGCD01005492;GBDF01050141;XM_005374672 XP_005374729 MODEL 8764373 protein-coding Cacna1h calcium voltage-gated channel subunit alpha1 H ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); scaffold protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN aldosterone biosynthetic process (ortholog); calcium ion import (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); apraxia (ortholog); FOUND IN caveola (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955442 16047965 16108862 - 102012368 AGCD01037891;GBDI01368048;XM_013517978;XM_013517979;XM_013517980;XM_013517981;XM_013517982;XM_013517983;XR_001235422 XP_013373432;XP_013373433;XP_013373434;XP_013373435;XP_013373436;XP_013373437 MODEL 8883812 ncrna LOC102009257 uncharacterized LOC102009257 NW_004955460 11538025 11540811 + 102009257 AGCD01048633;GBDF01077791;XR_263059 MODEL 9032439 protein-coding Dhx40 DEAH-box helicase 40 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955451 3456993 3500310 - 102014728 AGCD01043054;AGCD01043055;AGCD01043056;GBDK01430829;XM_005393985 XP_005394042 MODEL 8724541 protein-coding LOC102004145 cryptic protein-like NW_004955459 153874 177414 + 102004145 AGCD01047925;AGCD01047926;GBDF01016700;XM_013521086;XM_013521087;XM_013521088;XM_013521089 XP_013376540;XP_013376541;XP_013376542;XP_013376543 MODEL 9001603 protein-coding Kcnj13 potassium inwardly rectifying channel subfamily J member 13 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN intracellular potassium ion homeostasis (ortholog); potassium ion transmembrane transport (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH Leber congenital amaurosis 16 (ortholog); snowflake vitreoretinal degeneration (ortholog); FOUND IN monoatomic ion channel complex (ortholog); plasma membrane (ortholog) NW_004955453 3259924 3269394 + 102013246 AGCD01044654;GBDF01168433;XM_005395364;XM_013519903 XP_005395421;XP_013375357 MODEL 8804558 protein-coding Apoa4 apolipoprotein A4 ENCODES a protein that exhibits antioxidant activity (ortholog); cholesterol transfer activity (ortholog); copper ion binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); atherosclerosis (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular region (ortholog) NW_004955412 18158095 18160636 - 102022179 AGCD01012927;GBCQ01000938;XM_005378188 XP_005378245 MODEL 8780899 protein-coding Aff1 ALF transcription elongation factor 1 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA-templated transcription elongation (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955474 2748438 2899094 - 102017448 AGCD01054303;AGCD01054304;AGCD01054305;AGCD01054306;AGCD01054307;AGCD01054308;GBBH01077473;XM_005401342;XM_013502745;XM_013502746 XP_005401399;XP_013358199;XP_013358200 MODEL 39131849 rrna 5S_rRNA 5S ribosomal RNA 8789680 pseudo LOC102003813 small nuclear ribonucleoprotein Sm D2 pseudogene NW_004955561 1082911 1083548 - 102003813 AGCD01073830 MODEL 8806577 protein-coding Ankrd24 ankyrin repeat domain 24 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); stereocilium (ortholog) NW_004955495 4621059 4636235 - 102012553 AGCD01061937;AGCD01061938;GBDF01115379;XM_013505209;XM_013505210;XM_013505211;XM_013505212 XP_013360663;XP_013360664;XP_013360665;XP_013360666 MODEL 8799909 ncrna LOC102012792 uncharacterized LOC102012792 NW_004955514 558603 620325 + 102012792 AGCD01067014;AGCD01067015;AGCD01067016;GBDF01088853;XR_001231784;XR_264491 MODEL 8828677 protein-coding Cimap1a ciliary microtubule associated protein 1A INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); sperm flagellum (ortholog) NW_004955476 11837758 11841059 - 102003540 AGCD01055475;GBDF01002675;XM_005401892;XM_013502917 XP_005401949;XP_013358371 MODEL 8967925 protein-coding Eri2 ERI1 exoribonuclease family member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); thymoma (ortholog) NW_004955493 96758 103669 - 102029981 AGCD01060838;GBCC01027768;XM_005405034;XM_013504827 XP_005405091;XP_013360281 MODEL 8762388 pseudo LOC102021755 ras-related protein Rab-5A pseudogene NW_004955475 1653809 1654446 + 102021755 AGCD01054757 MODEL 8979735 ncrna LOC102006638 uncharacterized LOC102006638 NW_004955409 9973340 9976636 - 102006638 AGCD01009449;GBDF01306881;XR_259765 MODEL 8957237 protein-coding Cdcp1 CUB domain containing protein 1 INVOLVED IN cell population proliferation (ortholog); establishment of protein localization (ortholog); hepatocyte growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955420 26596932 26636207 + 102009846 AGCD01021418;AGCD01021419;AGCD01021420;GBBH01206955;XM_013513348 XP_013368802 MODEL 9007908 protein-coding Cftr CF transmembrane conductance regulator ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP hydrolysis activity (ortholog); bicarbonate transmembrane transporter activity (ortholog); INVOLVED IN amelogenesis (ortholog); bicarbonate transport (ortholog); cellular response to anoxia (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute kidney failure (ortholog); acute pancreatitis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955432 23179645 23328347 + 102016737 AGCD01031282;AGCD01031283;GBBH01149524;XM_005388136;XM_013515961 XP_005388193;XP_013371415 MODEL 8998739 protein-coding LOC102008162 uncharacterized protein KIAA1211 NW_004955447 14674162 14715780 - 102008162 AGCD01041019;AGCD01041020;GBBH01097866;GBDI01055287;XM_013518481 XP_013373935 MODEL 8816156 protein-coding Hsf1 heat shock transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to angiotensin (ortholog); cellular response to cadmium ion (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Cardiomegaly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955454 2907265 2932352 + 102029701 AGCD01045039;AGCD01045040;GBCE01074728;XM_005395870;XM_005395871;XM_005395872;XM_005395873;XM_005395874;XM_005395875;XM_005395876;XM_005395877;XM_013520098 XP_005395927;XP_005395928;XP_005395929;XP_005395930;XP_005395931;XP_005395932;XP_005395933;XP_005395934;XP_013375552 MODEL 8839748 protein-coding En1 engrailed homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cerebellum development (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); ENDOVE SYNDROME, LIMB-BRAIN TYPE (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955459 10839581 10844198 + 102008704 AGCD01048200;GBCB01074283;XM_005397707 XP_005397764 MODEL 8718409 ncrna LOC102008515 uncharacterized LOC102008515 NW_004955412 14935574 14945274 - 102008515 AGCD01012863;GBCQ01079249;XR_259995 MODEL 8850681 protein-coding Fbxo6 F-box protein 6 ENCODES a protein that exhibits carbohydrate binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum quality control compartment (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955486 2197296 2205947 - 102009064 AGCD01058994;GBDI01168354;XM_005403997;XM_005403998;XM_005403999;XM_013504313;XM_013504314 XP_005404054;XP_005404055;XP_005404056;XP_013359767;XP_013359768 MODEL 8803053 protein-coding Atp6v0a1 ATPase H+ transporting V0 subunit a1 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN regulation of macroautophagy (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Deglutition Disorders (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog); membrane (ortholog) NW_004955451 16396287 16442596 + 102018250 AGCD01043675;AGCD01043676;GBCB01020461;GBDF01050271;XM_005394459 XP_005394516 MODEL 9003132 protein-coding Adam7 ADAM metallopeptidase domain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN epididymis development (ortholog); epithelial cell morphogenesis (ortholog); positive regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH infertility (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955403 47465916 47521251 + 102017186 AGCD01002890;XM_005373907 XP_005373964 MODEL 8960935 protein-coding Ifnk interferon kappa ENCODES a protein that exhibits type I interferon receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); regulation of DNA-templated transcription (ortholog); response to virus (ortholog) NW_004955472 7359453 7360055 - 102023465 AGCD01053621;XM_005415249 XP_005415306 MODEL 8785522 protein-coding Clrn1 clarin 1 INVOLVED IN actin filament organization (ortholog); auditory receptor cell development (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH branchiootorenal syndrome (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN basal part of cell (ortholog); lamellipodium (ortholog); microtubule cytoskeleton (ortholog) NW_004955448 2062647 2106548 - 102027797 AGCD01041274;AGCD01041275;AGCD01041276;XM_005393016;XM_005393017;XM_005393018 XP_005393073;XP_005393074;XP_005393075 MODEL 8786096 protein-coding Cenpp centromere protein P ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN inner kinetochore (ortholog); nucleoplasm (ortholog) NW_004955515 5220257 5448347 - 102028784 AGCD01067343;AGCD01067344;AGCD01067345;AGCD01067346;AGCD01067347;AGCD01067348;AGCD01067349;AGCD01067350;AGCD01067351;AGCD01067352;AGCD01067353;GBDJ01218792;XM_005408912;XM_013506873;XM_013506874 XP_005408969;XP_013362327;XP_013362328 MODEL 8791676 protein-coding Izumo1 izumo sperm-oocyte fusion 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein binding involved in heterotypic cell-cell adhesion (ortholog); protein homodimerization activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955559 1825589 1830535 + 102004864 AGCD01073672;GBDF01187490;XM_005412934;XM_013508990;XM_013508991;XM_013508992 XP_005412991;XP_013364444;XP_013364445;XP_013364446 MODEL 8914022 protein-coding Casp7 caspase 7 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to staurosporine (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; glutathione metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); Alzheimer's disease (ortholog); FOUND IN caspase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955431 18685408 18723221 + 102007800 AGCD01030432;AGCD01030433;GBDF01253111;XM_005387788;XM_005387789;XM_005387790;XM_005387791;XM_005387792;XM_013515832 XP_005387845;XP_005387846;XP_005387847;XP_005387848;XP_005387849;XP_013371286 MODEL 39134351 misc_rna 7SK 7SK RNA 8793424 protein-coding Gpx8 glutathione peroxidase 8 (putative) ENCODES a protein that exhibits peroxidase activity (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955446 12498276 12504890 - 102019865 AGCD01040235;GBCE01042647;XM_005392706;XM_005392707;XM_013518459 XP_005392763;XP_005392764;XP_013373913 MODEL 39132040 rrna 5S_rRNA 5S ribosomal RNA 9052009 ncrna LOC102010381 uncharacterized LOC102010381 NW_004955495 7993126 7997095 - 102010381 AGCD01062174;GBCQ01010353;XR_264169 MODEL 8750004 protein-coding E4f1 E4F transcription factor 1 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spindle (ortholog) NW_004955442 15031210 15041437 - 102026046 AGCD01037854;GBCQ01125643;XM_005391435;XM_005391436;XM_005391437;XM_005391438;XM_013517726;XM_013517727;XM_013517728 XP_005391492;XP_005391493;XP_005391494;XP_005391495;XP_013373180;XP_013373181;XP_013373182 MODEL 8812664 protein-coding LOC102009630 U8 snoRNA-decapping enzyme-like NW_004955501 7101160 7103076 - 102009630 AGCD01064204;GBDF01154480;XM_005406843 XP_005406900 MODEL 8939234 protein-coding Lin28b lin-28 RNA binding posttranscriptional regulator B ENCODES a protein that exhibits RNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN miRNA catabolic process (ortholog); negative regulation of pre-miRNA processing (ortholog); negative regulation of primary miRNA processing (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); lung cancer (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955411 30381208 30499678 + 102029161 AGCD01012257;GBDF01020583;XM_013510789 XP_013366243 MODEL 8743490 ncrna LOC102007021 uncharacterized LOC102007021 NW_004955420 24298864 24300985 - 102007021 AGCD01021290;GBCQ01057710;XR_260746;XR_260747;XR_260748 MODEL 8934673 protein-coding Dhx57 DExH-box helicase 57 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955441 6479107 6541281 - 102013552 AGCD01036924;AGCD01036925;AGCD01036926;AGCD01036927;AGCD01036928;AGCD01036929;GBDF01113897;XM_005390897 XP_005390954 MODEL 8849915 ncrna LOC102011577 uncharacterized LOC102011577 NW_004955521 1595235 1596832 - 102011577 AGCD01068190;GBDF01280804;XR_264603 MODEL 9015700 protein-coding Col1a1 collagen type I alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); identical protein binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN blood vessel development (ortholog); bone trabecula formation (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH aggressive periodontitis (ortholog); alcoholic hepatitis (ortholog); anxiety disorder (ortholog); FOUND IN collagen trimer (ortholog); collagen type I trimer (ortholog); cytoplasm (ortholog) NW_004955451 11468156 11484410 + 102014851 AGCD01043354;GBDJ01017681;XM_005394176;XM_013519103 XP_005394233;XP_013374557 MODEL 8780924 pseudo LOC102017663 nuclear receptor-binding factor 2 pseudogene NW_004955419 27290865 27292952 + 102017663 AGCD01020429 MODEL 8981436 protein-coding Acacb acetyl-CoA carboxylase beta ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); D-glucose import across plasma membrane (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial fatty acid beta-oxidation multienzyme complex (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955455 10282308 10427439 + 102002995 AGCD01045951;AGCD01045952;AGCD01045953;AGCD01045954;AGCD01045955;AGCD01045956;GBDF01086406;XM_005396484;XM_013520458;XM_013520459;XM_013520460;XM_013520461 XP_005396541;XP_013375912;XP_013375913;XP_013375914;XP_013375915 MODEL 8969464 protein-coding Ccdc28b coiled-coil domain containing 28B INVOLVED IN cilium assembly (ortholog); social behavior (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); cone-rod dystrophy (ortholog); FOUND IN centrosome (ortholog) NW_004955452 10568992 10573811 + 102017297 AGCD01044280;GBDF01307658;XM_005395052 XP_005395109 MODEL 39133916 misc_rna 7SK 7SK RNA 10097631 ncrna LOC106149934 uncharacterized LOC106149934 NW_004955458 12690350 12694313 - 106149934 AGCD01047788;XR_001236431 MODEL 8932351 ncrna LOC102011165 uncharacterized LOC102011165 NW_004955403 10472232 10477715 + 102011165 AGCD01001922;GBDF01249569;XR_259169 MODEL 8996270 ncrna LOC102003814 uncharacterized LOC102003814 NW_004955444 9445917 9463729 - 102003814 AGCD01038970;GBDF01128007;XR_262253;XR_262254 MODEL 8718317 pseudo LOC102004518 microfibrillar-associated protein 1 pseudogene NW_004955437 7042525 7045014 + 102004518 AGCD01034448 MODEL 8892458 protein-coding Aldh6a1 aldehyde dehydrogenase 6 family member A1 ENCODES a protein that exhibits methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity (ortholog); thiolester hydrolase activity (ortholog); INVOLVED IN beta-alanine catabolic process (ortholog); brown fat cell differentiation (ortholog); L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); autism spectrum disorder (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955523 1343545 1369080 + 102021166 AGCD01068514;GBDK01130133;XM_005409401;XM_013507128 XP_005409458;XP_013362582 MODEL 8859465 protein-coding Btaf1 B-TFIID TATA-box binding protein associated factor 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); transcription coregulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955425 1239640 1350327 - 102014377 AGCD01025219;AGCD01025220;AGCD01025221;AGCD01025222;AGCD01025223;GBBH01149822;GBDK01319184;XM_013514876 XP_013370330 MODEL 8725157 protein-coding Cenpq centromere protein Q INVOLVED IN metaphase chromosome alignment (ortholog); positive regulation of protein localization to kinetochore (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN inner kinetochore (ortholog); nucleoplasm (ortholog) NW_004955410 33463041 33480573 - 102003524 AGCD01011371;GBDJ01369703;XM_005377535 XP_005377592 MODEL 9002705 protein-coding Ccsap centriole, cilia and spindle associated protein ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN mitotic spindle microtubule depolymerization (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN axon (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955492 8685667 8700306 + 102026224 AGCD01060824;GBDI01027918;GBDK01039111;XM_013504723 XP_013360177 MODEL 8881358 protein-coding Trim9 tripartite motif containing 9 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); SNARE binding (ortholog); INVOLVED IN negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of dense core granule exocytosis (ortholog); negative regulation of SNARE complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendrite (ortholog) NW_004955409 11837717 11946718 + 102015811 AGCD01009529;AGCD01009530;GBDF01209690;XM_005376796;XM_005376797;XM_005376798;XM_005376799;XM_005376802;XM_013510331 XP_005376853;XP_005376854;XP_005376855;XP_005376856;XP_005376859;XP_013365785 MODEL 39134050 misc_rna 7SK 7SK RNA 8907592 ncrna LOC102006644 uncharacterized LOC102006644 NW_004955466 12342203 12365183 - 102006644 AGCD01051124;AGCD01051125;AGCD01051126;GBDK01153059;XR_263319 MODEL 8879098 protein-coding Eif1 eukaryotic translation initiation factor 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN positive regulation of mRNA cis splicing, via spliceosome (ortholog); regulation of translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic 43S preinitiation complex (ortholog); eukaryotic 48S preinitiation complex (ortholog) NW_004955451 15978571 15980352 + 102025315 AGCD01043645;GBBH01003705;GBDK01012882;XM_013519437 XP_013374891 MODEL 8908191 protein-coding Cacna1i calcium voltage-gated channel subunit alpha1 I ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transport (ortholog); calcium ion transport into cytosol (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Developmental Disabilities (ortholog); hydrocephalus (ortholog) NW_004955413 25440533 25538367 + 102005358 AGCD01014407;AGCD01014408;AGCD01014409;GBDF01237729;XM_005379301 XP_005379358 MODEL 8809134 ncrna LOC102010382 uncharacterized LOC102010382 NW_004955424 3479982 3493499 + 102010382 AGCD01024311;GBDF01055317;XR_001234144 MODEL 8930054 protein-coding Kcnj14 potassium inwardly rectifying channel subfamily J member 14 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); PARTICIPATES IN neuron-to-neuron signaling pathway via the chemical synapse; ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955559 2023993 2028082 - 102010422 AGCD01073687;GBDJ01223840;XM_005412953 XP_005413010 MODEL 39131851 rrna 5S_rRNA 5S ribosomal RNA 39133763 misc_rna 7SK 7SK RNA 8962445 protein-coding Ankrd27 ankyrin repeat domain 27 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); SNARE binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); endosome to melanosome transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); early endosome (ortholog) NW_004955468 5314779 5364925 + 102003111 AGCD01051963;AGCD01051964;GBCB01041034;XM_013522443;XM_013522444;XM_013522445;XM_013522446;XM_013522447 XP_013377897;XP_013377898;XP_013377899;XP_013377900;XP_013377901 MODEL 8718522 ncrna LOC102012794 uncharacterized LOC102012794 NW_004955515 468692 476022 + 102012794 AGCD01067199;GBDF01281122;XR_264518 MODEL 9028039 protein-coding Adam8 ADAM metallopeptidase domain 8 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); immunoglobulin receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); canonical NF-kappaB signal transduction (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN alpha9-beta1 integrin-ADAM8 complex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955477 10894288 10906961 - 102030074 AGCD01055709;GBDI01223313;XM_013503039;XM_013503040;XM_013503041;XM_013503042;XM_013503043;XM_013503044 XP_013358493;XP_013358494;XP_013358495;XP_013358496;XP_013358497;XP_013358498 MODEL 8800431 protein-coding Il33 interleukin 33 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-33 receptor binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to mechanical stimulus (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); allergic asthma (ortholog); Alzheimer's disease (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955434 10145449 10187595 + 102006603 AGCD01032327;GBBH01050842;XM_005388671;XM_005388672;XM_013516393 XP_005388728;XP_005388729;XP_013371847 MODEL 8794174 protein-coding Eri3 ERI1 exoribonuclease family member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955464 13855581 13984598 + 102017107 AGCD01050294;AGCD01050295;AGCD01050296;AGCD01050297;AGCD01050298;GBBH01114559;XM_005398762;XM_005398764;XM_013521692;XM_013521693;XM_013521694;XM_013521696;XM_013521697 XP_005398819;XP_005398821;XP_013377146;XP_013377147;XP_013377148;XP_013377150;XP_013377151 MODEL 8843827 protein-coding Gdf5 growth differentiation factor 5 ENCODES a protein that exhibits BMP binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); chondroblast differentiation (ortholog); ASSOCIATED WITH acromesomelic dysplasia, Grebe type (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog); brachydactyly (ortholog) NW_004955422 25992081 25997122 + 102012449 AGCD01023273;GBBH01147047;XM_005384796 XP_005384853 MODEL 8711549 protein-coding Izumo1r IZUMO1 receptor, JUNO ENCODES a protein that exhibits folic acid binding (ortholog); signaling receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell adhesion (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); single fertilization (ortholog); ASSOCIATED WITH sarcoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955414 283646 287422 - 102018589 AGCD01014715;GBDI01316974;XM_005379681;XM_013511756;XM_013511758 XP_005379738;XP_013367210;XP_013367212 MODEL 9001066 protein-coding Aff2 ALF transcription elongation factor 2 ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of gene expression (ortholog); nuclear speck organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955498 1012323 1497031 + 102020584 AGCD01062737;AGCD01062738;AGCD01062739;AGCD01062740;AGCD01062741;AGCD01062742;AGCD01062743;AGCD01062744;GBBH01113542;XM_005406396 XP_005406453 MODEL 8982854 protein-coding Cdcp2 CUB domain containing protein 2 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955464 5098102 5115555 + 102004792 AGCD01049999;GBDK01218834;XM_005398534 XP_005398591 MODEL 8732023 ncrna LOC102004146 uncharacterized LOC102004146 NW_004955460 10717060 10718321 - 102004146 AGCD01048602;GBDI01208841;XR_263051 MODEL 8724002 protein-coding Btbd1 BTB domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Delayed Emergence from Anesthesia (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955416 13621343 13657276 + 102011986 AGCD01017229;GBDF01004869;XM_013512487 XP_013367941 MODEL 39132041 rrna 5S_rRNA 5S ribosomal RNA 9011401 protein-coding Cga glycoprotein hormones, alpha polypeptide ENCODES a protein that exhibits follicle-stimulating hormone activity (ortholog); hormone activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); developmental growth (ortholog); follicle-stimulating hormone secretion (ortholog); PARTICIPATES IN follicle-stimulating hormone signaling pathway; luteinizing hormone signaling pathway; ASSOCIATED WITH adrenal gland disease (ortholog); atrial fibrillation (ortholog); breast cancer (ortholog); FOUND IN extracellular region (ortholog); follicle-stimulating hormone complex (ortholog); pituitary gonadotropin complex (ortholog) NW_004955411 14092743 14168297 - 102023341 AGCD01011908;AGCD01011909;GBDF01173117;XM_005377714 XP_005377771 MODEL 39134051 misc_rna 7SK 7SK RNA 9050425 ncrna LOC102009632 uncharacterized LOC102009632 NW_004955427 7305557 7312900 - 102009632 AGCD01027048;GBDF01114554;XR_261237 MODEL 8711623 protein-coding Apoa5 apolipoprotein A5 ENCODES a protein that exhibits enzyme binding (ortholog); heparin binding (ortholog); lipase activator activity (ortholog); INVOLVED IN acylglycerol homeostasis (ortholog); animal organ regeneration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH cerebral infarction (ortholog); dementia (ortholog); hyperlipoproteinemia type III (ortholog); FOUND IN chylomicron (ortholog); early endosome (ortholog); extracellular region (ortholog) NW_004955412 18128861 18131752 - 102021108 AGCD01012926;XM_005378185;XM_005378186;XM_013511206 XP_005378242;XP_005378243;XP_013366660 MODEL 8724624 protein-coding LOC102008516 epididymal secretory glutathione peroxidase NW_004955465 13787944 13795076 + 102008516 AGCD01050624;AGCD01050625;XM_005399016 XP_005399073 MODEL 9039356 protein-coding Fbxo7 F-box protein 7 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein kinase binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN classical Lewy body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 41429421 41449670 + 102029698 AGCD01005551;AGCD01005552;GBBH01089539;GBDF01004268;XM_013519159 XP_013374613 MODEL 8853461 protein-coding Col1a2 collagen type I alpha 2 chain ENCODES a protein that exhibits identical protein binding (ortholog); platelet-derived growth factor binding (ortholog); protease binding (ortholog); INVOLVED IN blood vessel development (ortholog); bone mineralization (ortholog); cellular response to aldehyde (ortholog); PARTICIPATES IN endothelin signaling pathway; interleukin-4 signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN collagen trimer (ortholog); collagen type I trimer (ortholog); endoplasmic reticulum (ortholog) NW_004955432 11127961 11164145 + 102012230 AGCD01030942;GBDJ01002045;XM_005388041 XP_005388098 MODEL 8904259 protein-coding Ccdc3 coiled-coil domain containing 3 INVOLVED IN blood vessel development (ortholog); calcium ion homeostasis (ortholog); cholesterol metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955462 909300 1013927 - 102024317 AGCD01049092;AGCD01049093;AGCD01049094;AGCD01049095;AGCD01049096;GBBH01002230;XM_013521472 XP_013376926 MODEL 8881260 protein-coding LOC102011167 glycosyltransferase-like protein LARGE1 NW_004955650 55837 106695 - 102011167 AGCD01077795;AGCD01077796;AGCD01077797;AGCD01077798;AGCD01077799;GBDF01278631;GBDI01324495;XM_005415053 XP_005415110 MODEL 39134352 misc_rna 7SK 7SK RNA 8742731 protein-coding LOC102003815 vomeronasal type-2 receptor 116-like NW_004955563 73850 94496 - 102003815 AGCD01074040;AGCD01074041;AGCD01074042;XM_005413096 XP_005413153 MODEL 8883780 protein-coding Gramd1a GRAM domain containing 1A ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN intracellular cholesterol transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog); organelle membrane contact site (ortholog) NW_004955468 4347387 4371096 + 102008933 AGCD01051906;AGCD01051907;GBDI01110549;XM_005400014;XM_005400015;XM_005400016;XM_013522359;XM_013522360;XM_013522361;XM_013522362;XM_013522363 XP_005400071;XP_005400072;XP_005400073;XP_013377813;XP_013377814;XP_013377815;XP_013377816;XP_013377817 MODEL 9064039 protein-coding LOC102021758 tubulin polyglutamylase TTLL13 NW_004955416 15080728 15102506 - 102021758 AGCD01017299;AGCD01017300;GBDI01167579;XM_005381529;XM_013512473;XM_013512474 XP_005381586;XP_013367927;XP_013367928 MODEL 8762910 protein-coding Triml1 tripartite motif family like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Prostate Cancer (ortholog); lung cancer (ortholog) NW_004955403 21043233 21050261 - 102013678 AGCD01002179;GBDF01054116;XM_005373423;XM_005373424 XP_005373480;XP_005373481 MODEL 8786271 protein-coding Eaf1 ELL associated factor 1 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); transcription elongation factor complex (ortholog) NW_004955430 1933290 1946900 + 102011466 AGCD01029143;GBDF01053689;XM_005387303 XP_005387360 MODEL 8977147 protein-coding Hsf2 heat shock transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955436 4387498 4406719 + 102021592 AGCD01033662;AGCD01033663;GBCB01002460;GBDF01005455;XM_013516603;XM_013516604;XM_013516605;XM_013516606;XM_013516607;XM_013516608;XM_013516609 XP_013372057;XP_013372058;XP_013372059;XP_013372060;XP_013372061;XP_013372062;XP_013372063 MODEL 39131454 protein-coding LIN28B lin-28 homolog B 8778210 protein-coding Cacna1s calcium voltage-gated channel subunit alpha1 S ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); molecular function activator activity (ortholog); small molecule binding (ortholog); INVOLVED IN calcium ion transport (ortholog); endoplasmic reticulum organization (ortholog); extraocular skeletal muscle development (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine head (ortholog); I band (ortholog) NW_004955406 37201180 37263328 - 102009684 AGCD01006572;GBCE01169715;XM_005375160;XM_013522110 XP_005375217;XP_013377564 MODEL 8732839 ncrna LOC102007033 uncharacterized LOC102007033 NW_004955424 2197417 2203371 + 102007033 AGCD01024264;XR_001234174;XR_261035 MODEL 39133917 misc_rna 7SK 7SK RNA 8940884 pseudo LOC102017664 HAUS augmin-like complex subunit 2 pseudogene NW_004955419 29773998 29774848 - 102017664 AGCD01020502 MODEL 8777466 protein-coding Cimap1b ciliary microtubule associated protein 1B ASSOCIATED WITH cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 33509185 33511002 - 102005246 AGCD01014673;GBDI01020034;XM_005379583;XM_013511512 XP_005379640;XP_013366966 MODEL 8703413 protein-coding Acad10 acyl-CoA dehydrogenase family member 10 ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); kinase activity (ortholog); INVOLVED IN fatty acid catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955482 8282530 8327511 + 102028967 AGCD01057515;GBDF01160099;XM_005403170;XM_013503680;XM_013503681;XM_013503682;XM_013503683 XP_005403227;XP_013359134;XP_013359135;XP_013359136;XP_013359137 MODEL 8801171 protein-coding Clrn2 clarin 2 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); inner ear auditory receptor cell differentiation (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 117 (ortholog); Hearing Loss (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN stereocilium bundle (ortholog) NW_004955480 6634653 6645499 - 102008943 AGCD01056686;GBCE01141855;GBDF01112364;XM_005402498 XP_005402555 MODEL 8707916 protein-coding LOC102011579 pancreatic alpha-amylase NW_004955435 7974418 8023066 + 102011579 AGCD01032983;AGCD01032984;AGCD01032985;AGCD01032986;AGCD01032987;AGCD01032988;AGCD01032989;GBDK01013521;XM_005388812;XM_013516505;XM_013516506 XP_005388869;XP_013371959;XP_013371960 MODEL 8954999 protein-coding Ifnlr1 interferon lambda receptor 1 INVOLVED IN defense response to virus (ortholog); mucosal immune response (ortholog); positive regulation of cellular respiration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN interleukin-28 receptor complex (ortholog) NW_004955452 4002389 4028193 - 102026180 AGCD01043962;AGCD01043963;GBCE01169046;XM_013519716;XM_013519717 XP_013375170;XP_013375171 MODEL 8882745 protein-coding Cdh1 cadherin 1 ENCODES a protein that exhibits alpha-catenin binding (ortholog); ankyrin binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adherens junction organization (ortholog); bicellular tight junction assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical junction complex (ortholog) NW_004955484 7782409 7861082 - 102006134 AGCD01058346;AGCD01058347;AGCD01058348;AGCD01058349;AGCD01058350;AGCD01058351;AGCD01058352;GBBH01002202;GBCE01028842;XM_013503937 XP_013359391 MODEL 9041564 protein-coding LOC102005577 uncharacterized LOC102005577 NW_004955465 13237704 13244781 + 102005577 AGCD01050593;GBCE01177470;XM_013521808 XP_013377262 MODEL 8769933 protein-coding Casp8 caspase 8 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); cysteine-type endopeptidase activity (ortholog); death effector domain binding (ortholog); INVOLVED IN response to auditory stimulus; angiogenesis (ortholog); apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; extrinsic apoptotic pathway; FasL mediated signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN caspase complex (ortholog); CD95 death-inducing signaling complex (ortholog); cell body (ortholog) NW_004955403 322082 348591 - 102023097 AGCD01001688;AGCD01001689;GBDK01089606;XM_005373209;XM_005373210;XM_005373212;XM_013511750 XP_005373266;XP_005373267;XP_005373269;XP_013367204 MODEL 8703913 protein-coding Col20a1 collagen type XX alpha 1 chain ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog) NW_004955528 847416 878741 - 102015343 AGCD01069547;GBCB01080248;XM_013507451;XM_013507452;XM_013507453;XM_013507454;XM_013507455;XM_013507456;XM_013507457;XR_001231982 XP_013362905;XP_013362906;XP_013362907;XP_013362908;XP_013362909;XP_013362910;XP_013362911 MODEL 8701664 ncrna LOC102009258 uncharacterized LOC102009258 NW_004955410 7298409 7299909 + 102009258 AGCD01010712;GBDK01133796;XR_259823;XR_259824 MODEL 9058673 protein-coding Cenps centromere protein S ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); interstrand cross-link repair (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955486 3157535 3167424 - 102015527 AGCD01059018;GBBH01188068;XM_005404017;XM_013504292 XP_005404074;XP_013359746 MODEL 8814145 protein-coding Il34 interleukin 34 ENCODES a protein that exhibits identical protein binding (ortholog); macrophage colony-stimulating factor receptor binding (ortholog); INVOLVED IN interleukin-34-mediated signaling pathway (ortholog); microglial cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955484 3362240 3429031 + 102005145 AGCD01058176;AGCD01058177;AGCD01058178;AGCD01058179;AGCD01058180;AGCD01058181;GBCE01095073;XM_005403487;XM_005403488;XM_005403492;XM_013503872;XM_013503873 XP_005403544;XP_005403545;XP_005403549;XP_013359326;XP_013359327 MODEL 9030976 protein-coding En2 engrailed homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic brain development (ortholog); gene expression (ortholog); hindbrain development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955491 8422295 8427038 + 102006355 AGCD01060616;GBCQ01057725;XM_013504574 XP_013360028 MODEL 9031589 pseudo LOC102003820 40S ribosomal protein S16 pseudogene NW_004955579 331808 332248 - 102003820 AGCD01075545 MODEL 8791821 pseudo LOC102010387 selenide, water dikinase 2-like NW_004955502 7355026 7356276 - 102010387 AGCD01064441 MODEL 9067308 pseudo LOC102004151 olfactory receptor 150-like NW_004955412 24990393 24991336 + 102004151 AGCD01013133 MODEL 8986140 protein-coding Dhx58 DExH-box helicase 58 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of innate immune response (ortholog); negative regulation of MDA-5 signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955451 16186263 16191928 - 102012597 AGCD01043658;GBBH01137215;XM_013519384;XM_013519386;XM_013519387 XP_013374838;XP_013374840;XP_013374841 MODEL 9042135 protein-coding Atp6v0a2 ATPase H+ transporting V0 subunit a2 ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive cutis laxa type IIA (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal vesicle (ortholog); endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955482 5311434 5337684 - 102026867 AGCD01057325;GBBH01063657;GBDI01120599;XM_013503544 XP_013358998 MODEL 39131852 rrna 5S_rRNA 5S ribosomal RNA 8981012 protein-coding Btbd10 BTB domain containing 10 INVOLVED IN positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955414 28748835 28809735 - 102017326 AGCD01015685;AGCD01015686;AGCD01015687;AGCD01015688;GBDJ01314884;XM_005380310;XM_005380311;XM_005380313 XP_005380367;XP_005380368;XP_005380370 MODEL 8864559 protein-coding Hsf2bp heat shock transcription factor 2 binding protein INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH lung cancer (ortholog); primary ovarian insufficiency 19 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955407 38577463 38671929 + 102030600 AGCD01007809;AGCD01007810;GBDF01038954;XM_013504957;XM_013504964;XM_013504972;XM_013504978 XP_013360411;XP_013360418;XP_013360426;XP_013360432 MODEL 8946544 protein-coding Apob apolipoprotein B ENCODES a protein that exhibits cholesterol transfer activity (ortholog); heparin binding (ortholog); lipase binding (ortholog); INVOLVED IN artery morphogenesis (ortholog); cellular response to lipoprotein particle stimulus (ortholog); cellular response to prostaglandin stimulus (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; forkhead class A signaling pathway; lipoprotein metabolic pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); arteriosclerosis (ortholog); Arthralgia (ortholog); FOUND IN chylomicron (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955469 3437422 3478408 - 102018588 AGCD01052300;GBDI01245911;JN414052;XM_005400358;XM_005400359 AEP18088;XP_005400415;XP_005400416 MODEL 39133764 misc_rna 7SK 7SK RNA 8843524 protein-coding Ankrd28 ankyrin repeat domain 28 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN positive regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); protein serine/threonine phosphatase complex (ortholog) NW_004955430 8014631 8197434 - 102025277 AGCD01029378;AGCD01029379;AGCD01029380;AGCD01029381;AGCD01029382;AGCD01029383;GBDI01293224;XM_005387446;XM_005387448;XM_013515633;XM_013515634;XM_013515635;XM_013515636;XM_013515637;XM_013515638 XP_005387503;XP_005387505;XP_013371087;XP_013371088;XP_013371089;XP_013371090;XP_013371091;XP_013371092 MODEL 8936557 protein-coding Fbxo8 F-box protein 8 INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN ubiquitin ligase complex (ortholog) NW_004955403 32798827 32845684 + 102022659 AGCD01002441;GBCQ01096548;XM_005373536 XP_005373593 MODEL 8892956 ncrna LOC102008163 uncharacterized LOC102008163 NW_004955448 3515139 3550351 + 102008163 AGCD01041335;GBDF01279163;XR_262458 MODEL 10136071 ncrna LOC106149935 uncharacterized LOC106149935 NW_004955458 12708341 12709134 - 106149935 AGCD01047788;GBDF01013092;XR_001236432 MODEL 8948306 protein-coding Izumo2 IZUMO family member 2 NW_004955559 888457 894644 + 102017515 AGCD01073619;GBDF01222463;XM_013508945 XP_013364399 MODEL 8911479 protein-coding Aldh7a1 aldehyde dehydrogenase 7 family member A1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); betaine-aldehyde dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid catabolic process (ortholog); endosome to lysosome transport (ortholog); energy homeostasis (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; choline metabolic pathway; glutaric aciduria type I pathway; ASSOCIATED WITH Ataxia (ortholog); benign neonatal seizures (ortholog); bone disease (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrial matrix (ortholog) NW_004955521 4365075 4396105 - 102018524 AGCD01068261;GBDF01084687;XM_005409326 XP_005409383 MODEL 9021535 protein-coding Erich1 glutamate rich 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog) NW_004955403 58508113 58580682 + 102024638 AGCD01003183;AGCD01003184;AGCD01003185;AGCD01003186;GBCQ01178907;GBDJ01117475;XM_013515049 XP_013370503 MODEL 8701449 protein-coding Adam9 ADAM metallopeptidase domain 9 ENCODES a protein that exhibits collagen binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955463 14545425 14646498 + 102029159 AGCD01049912;AGCD01049913;AGCD01049914;GBCB01026114;XM_005398463 XP_005398520 MODEL 8965932 protein-coding Ccser1 coiled-coil serine rich protein 1 INVOLVED IN bone development (ortholog); osteoclast differentiation (ortholog); protein activation cascade (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amenorrhea (ortholog); cocaine dependence (ortholog) NW_004955405 1355816 2463529 + 102009677 AGCD01004602;AGCD01004603;AGCD01004604;AGCD01004605;AGCD01004606;AGCD01004607;AGCD01004608;AGCD01004609;AGCD01004610;AGCD01004611;AGCD01004612;AGCD01004613;AGCD01004614;AGCD01004615;AGCD01004616;AGCD01004617;AGCD01004618;AGCD01004619;AGCD01004620;AGCD01004621;GBDJ01096112;XM_005374255;XM_005374256;XM_005374257 XP_005374312;XP_005374313;XP_005374314 MODEL 8839867 protein-coding Ccdc30 coiled-coil domain containing 30 ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955537 2086971 2207825 + 102010523 AGCD01070917;AGCD01070918;AGCD01070919;GBCQ01090404;XM_005410599;XM_005410600;XM_005410601;XM_005410602;XM_005410603;XM_005410604;XM_005410605;XM_005410606;XM_005410607;XM_005410608;XM_013507757;XM_013507758;XM_013507759;XM_013507760;XM_013507761;XM_013507762 XP_005410656;XP_005410657;XP_005410658;XP_005410659;XP_005410660;XP_005410661;XP_005410662;XP_005410663;XP_005410664;XP_005410665;XP_013363211;XP_013363212;XP_013363213;XP_013363214;XP_013363215;XP_013363216 MODEL 8856572 protein-coding Aff3 ALF transcription elongation factor 3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN embryonic hindlimb morphogenesis (ortholog); regulation of DNA-templated transcription (ortholog); response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); central sleep apnea (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955470 5800152 6183761 - 102028181 AGCD01052760;AGCD01052761;AGCD01052762;AGCD01052763;AGCD01052764;AGCD01052765;GBCE01171131;XM_005400832 XP_005400889 MODEL 8935663 protein-coding Eaf2 ELL associated factor 2 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of epithelial cell proliferation involved in prostate gland development (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); transcription elongation factor complex (ortholog) NW_004955427 21171900 21204138 + 102006690 AGCD01027432;AGCD01027433;AGCD01027434;GBCE01143382;XM_005386499 XP_005386556 MODEL 39134052 misc_rna 7SK 7SK RNA 8995749 protein-coding LOC102012796 vomeronasal type-2 receptor 116-like NW_004955524 3477585 3506250 - 102012796 AGCD01068903;AGCD01068904;AGCD01068905;GBDJ01017969;XM_013507196 XP_013362650 MODEL 8928427 protein-coding LOC102004531 uncharacterized LOC102004531 NW_004955447 9636461 9712154 + 102004531 AGCD01040865;AGCD01040866;XM_005392954 XP_005393011 MODEL 8868980 protein-coding Kcnj15 potassium inwardly rectifying channel subfamily J member 15 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Lung Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955407 37261892 37313484 + 102018468 AGCD01007779;GBCQ01096829;XM_005375758;XM_013504738;XM_013504739;XM_013504744;XM_013504746;XM_013504750;XM_013504757;XR_001231265;XR_001231266 XP_005375815;XP_013360192;XP_013360193;XP_013360198;XP_013360200;XP_013360204;XP_013360211 MODEL 39131853 rrna 5S_rRNA 5S ribosomal RNA 9023657 pseudo LOC102017668 zinc finger and BTB domain-containing protein 44 pseudogene NW_004955420 24964791 24968106 - 102017668 AGCD01021339 MODEL 39134353 misc_rna 7SK 7SK RNA 8722476 protein-coding Acad11 acyl-CoA dehydrogenase family member 11 ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); kinase activity (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); fatty acid catabolic process (ortholog); FOUND IN mitochondrial membrane (ortholog); nucleus (ortholog); peroxisome (ortholog) NW_004955501 5871328 5952786 + 102006481 AGCD01064173;AGCD01064174;AGCD01064175;GBCE01176512;GBCE01176513;XM_005406834;XM_005406835 XP_005406891;XP_005406892 MODEL 8734527 protein-coding Eif1ad eukaryotic translation initiation factor 1A domain containing ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 19339111 19343673 + 102021773 AGCD01023001;GBCQ01035749;XM_005384436 XP_005384493 MODEL 9008055 protein-coding LOC102021762 uncharacterized LOC102021762 NW_004955417 27505855 27508890 + 102021762 AGCD01018558;GBDF01146423;XM_005381948;XM_005381949;XM_005381950 XP_005382005;XP_005382006;XP_005382007 MODEL 39132042 rrna 5S_rRNA 5S ribosomal RNA 39131472 protein-coding TRIML2 tripartite motif family like 2 39131374 protein-coding IL36G interleukin 36 gamma 8897189 pseudo LOC102010388 uncharacterized LOC102010388 NW_004955503 3309922 3337412 - 102010388 AGCD01064622 MODEL 8714015 protein-coding LOC102009633 chromosome unknown open reading frame, human C17orf62 INVOLVED IN calcium ion transport (ortholog); gene expression (ortholog); innate immune response (ortholog); ASSOCIATED WITH autosomal recessive chronic granulomatous disease 5 (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955506 697091 702900 + 102009633 AGCD01065234;GBCQ01009071;XM_005407199;XM_005407201;XM_005407202;XM_013506085;XM_013506086 XP_005407256;XP_005407258;XP_005407259;XP_013361539;XP_013361540 MODEL 8790356 protein-coding LOC102003821 HLA class I histocompatibility antigen, B-14 alpha chain-like NW_004955583 520916 524888 + 102003821 AGCD01075833;AGCD01075834;GBBH01118053;XM_013509777 XP_013365231 MODEL 8917941 protein-coding Enah ENAH actin regulator ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); WW domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actin polymerization or depolymerization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); filopodium (ortholog); focal adhesion (ortholog) NW_004955520 310482 374800 + 102030115 AGCD01068015;GBDI01069846;XM_013507016 XP_013362470 MODEL 8790126 protein-coding Lin37 lin-37 DREAM MuvB core complex component ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN G0 to G1 transition (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955468 2799641 2803880 - 102021431 AGCD01051838;GBBH01119468;XM_005399965;XM_005399966;XM_005399968;XM_013522390;XM_013522391;XM_013522392 XP_005400022;XP_005400023;XP_005400025;XP_013377844;XP_013377845;XP_013377846 MODEL 8917295 protein-coding Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity involved in bundle of His cell action potential (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brain infarction (ortholog); Breast Cancer, Familial (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); L-type voltage-gated calcium channel complex (ortholog) NW_004955410 3544398 3963582 + 102003216 AGCD01010651;AGCD01010652;AGCD01010653;AGCD01010654;AGCD01010655;AGCD01010656;GBDI01170091;XM_005377191;XM_013510508;XM_013510509;XM_013510510 XP_005377248;XP_013365962;XP_013365963;XP_013365964 MODEL 39133918 misc_rna 7SK 7SK RNA 8705883 ncrna LOC102011583 uncharacterized LOC102011583 NW_004955436 8909255 8926076 + 102011583 AGCD01033752;AGCD01033753;AGCD01033754;GBDI01265317;XR_001234994;XR_261775;XR_261776 MODEL 8902891 pseudo LOC102011168 telomeric repeat-binding factor 1 pseudogene NW_004957891 76 1145 - 102011168 AGCD01081287 MODEL 9068179 protein-coding Btbd16 BTB domain containing 16 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955477 560095 627017 + 102019167 AGCD01055492;GBDF01047392;XM_005401934;XM_013503026;XM_013503027 XP_005401991;XP_013358480;XP_013358481 MODEL 8849085 protein-coding Cdh10 cadherin 10 INVOLVED IN synaptic membrane adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic specialization membrane (ortholog) NW_004955426 11803669 11974051 - 102015545 AGCD01026322;AGCD01026323;AGCD01026324;GBDF01290123;XM_005386142 XP_005386199 MODEL 9032158 protein-coding Gdf6 growth differentiation factor 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); cell migration (ortholog); ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); congenital anomalies of kidney and urinary tract (ortholog); FOUND IN extracellular region (ortholog) NW_004955417 12152448 12169173 - 102004926 AGCD01018154;GBBH01226389;XM_005381831 XP_005381888 MODEL 8848266 protein-coding Hsf4 heat shock transcription factor 4 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell development (ortholog); eye development (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); cataract (ortholog); cataract 5 multiple types (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955484 9447641 9452784 - 102015203 AGCD01058415;GBDI01355509;XM_005403696;XM_005403697;XM_013503959 XP_005403753;XP_005403754;XP_013359413 MODEL 39131854 rrna 5S_rRNA 5S ribosomal RNA 8969626 protein-coding Izumo3 IZUMO family member 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); FOUND IN inner acrosomal membrane (ortholog) NW_004955472 9923831 9958452 + 102019691 AGCD01053699;GBDF01207349;XM_005401190 XP_005401247 MODEL 9066282 protein-coding LOC102017670 zinc finger protein 709-like NW_004955421 8318637 8347417 - 102017670 AGCD01021806;AGCD01021807;GBDI01254648;XM_013513784;XM_013513785;XM_013513786;XM_013513787 XP_013369238;XP_013369239;XP_013369240;XP_013369241 MODEL 8788609 protein-coding Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); cytosine deaminase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cytidine to uridine editing (ortholog); defense response to virus (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH colon cancer (ortholog); Experimental Liver Cirrhosis (ortholog); familial hyperlipidemia (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955413 6471933 6480475 - 102017972 AGCD01013743;GBDF01301259;XM_005379611 XP_005379668 MODEL 8739981 ncrna LOC102008517 uncharacterized LOC102008517 NW_004955412 20462018 20473633 + 102008517 AGCD01013009;GBDF01220421;XR_260003 MODEL 8941379 protein-coding Col21a1 collagen type XXI alpha 1 chain ASSOCIATED WITH cholangiocarcinoma (ortholog); Cleft Lip with or without Cleft Palate, Nonsyndromic, 7 (ortholog); cocaine dependence (ortholog); FOUND IN cytosol (ortholog) NW_004955411 68176 260521 + 102030504 AGCD01011451;AGCD01011452;AGCD01011453;AGCD01011454;GBCE01125541;XM_005377582;XM_005377583;XM_005377584 XP_005377639;XP_005377640;XP_005377641 MODEL 8891744 protein-coding Cenpt centromere protein T INVOLVED IN chromosome organization (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) NW_004955484 8862221 8867881 + 102022500 AGCD01058398;GBDF01240506;XM_005403622 XP_005403679 MODEL 8889595 protein-coding Aldh8a1 aldehyde dehydrogenase 8 family member A1 ENCODES a protein that exhibits aminomuconate-semialdehyde dehydrogenase activity (ortholog); retinal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); retinal metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH cholestasis (ortholog); hepatocellular carcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955439 1773884 1794325 + 102004121 AGCD01035627;GBCQ01041842;XM_005390500;XM_013517432 XP_005390557;XP_013372886 MODEL 8821744 protein-coding LOC102004158 protocadherin beta-4 NW_004955415 12759671 12762676 - 102004158 AGCD01016228;AGCD01016229;XM_013512118 XP_013367572 MODEL 9022701 protein-coding LOC102006651 sulfotransferase 1C2 NW_004955470 11975224 11987943 + 102006651 AGCD01052916;AGCD01052917;GBCQ01000070;XM_005400797;XM_005400798;XM_005400799 XP_005400854;XP_005400855;XP_005400856 MODEL 8863761 protein-coding Atp6v0a4 ATPase H+ transporting V0 subunit a4 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN ossification (ortholog); proton transmembrane transport (ortholog); regulation of pH (ortholog); ASSOCIATED WITH autosomal recessive distal renal tubular acidosis 3 with or without sensorineural hearing loss (ortholog); cervical cancer (ortholog); Dehydration (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955494 4174542 4251450 + 102030207 AGCD01061493;GBDJ01072962;XM_005405451;XM_005405452;XM_005405453;XM_005405454;XM_013505029 XP_005405508;XP_005405509;XP_005405510;XP_005405511;XP_013360483 MODEL 39133765 misc_rna 7SK 7SK RNA 9066624 protein-coding Ankrd29 ankyrin repeat domain 29 ASSOCIATED WITH sarcoma (ortholog); stomach cancer (ortholog) NW_004955402 11751417 11775499 - 102019874 AGCD01000306;AGCD01000307;GBBH01101627;GBDK01000009;XM_013504248 XP_013359702 MODEL 8987547 protein-coding Casp8ap2 caspase 8 associated protein 2 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); Fas signaling pathway (ortholog); PARTICIPATES IN aldosterone signaling pathway; FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955411 16535646 16568139 - 102009361 AGCD01011977;GBCB01065579;XM_005377760;XM_005377761;XM_013510890;XM_013510891 XP_005377817;XP_005377818;XP_013366344;XP_013366345 MODEL 8745521 ncrna LOC102009260 uncharacterized LOC102009260 NW_004955463 9987660 9990965 - 102009260 AGCD01049803;GBDF01112751;XR_263165 MODEL 8867593 protein-coding Gramd1b GRAM domain containing 1B ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); intracellular cholesterol transport (ortholog); lysosome to ER cholesterol transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); intellectual disability (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955412 24212412 24387798 + 102022064 AGCD01013110;AGCD01013111;AGCD01013112;GBCQ01037515;XM_005378386;XM_005378387;XM_005378389;XM_005378390;XM_005378391;XM_013511136;XM_013511137;XM_013511138;XM_013511139;XM_013511140;XM_013511142 XP_005378443;XP_005378444;XP_005378446;XP_005378447;XP_005378448;XP_013366590;XP_013366591;XP_013366592;XP_013366593;XP_013366594;XP_013366596 MODEL 39134354 misc_rna 7SK 7SK RNA 9029312 protein-coding Ccser2 coiled-coil serine rich protein 2 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN microtubule cytoskeleton (ortholog) NW_004955510 3802239 3962533 + 102006054 AGCD01066247;AGCD01066248;AGCD01066249;AGCD01066250;AGCD01066251;AGCD01066252;AGCD01066253;GBBH01193210;GBDK01146275;XM_005407889;XM_013506323 XP_005407946;XP_013361777 MODEL 8719535 protein-coding Erich2 glutamate rich 2 NW_004955449 4013473 4040524 - 102023213 AGCD01041872;GBBH01000968;XM_005393243;XM_013518737;XM_013518738;XM_013518739;XM_013518740;XM_013518741;XM_013518742;XM_013518743 XP_005393300;XP_013374191;XP_013374192;XP_013374193;XP_013374194;XP_013374195;XP_013374196;XP_013374197 MODEL 8784600 protein-coding LOC102017677 olfactory receptor 18-like NW_004955495 442150 443091 - 102017677 AGCD01061630;XM_005405555 XP_005405612 MODEL 8803177 protein-coding Ccdc32 coiled-coil domain containing 32 INVOLVED IN cilium organization (ortholog); head development (ortholog); regulation of clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH Cardiofacioneurodevelopmental Syndrome (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN clathrin-coated pit (ortholog) NW_004955416 7464498 7482153 - 102022593 AGCD01016982;AGCD01016983;AGCD01016984;GBDI01224742;XM_005381244;XM_005381245;XM_005381246;XM_005381248;XM_013512647;XM_013512648 XP_005381301;XP_005381302;XP_005381303;XP_005381305;XP_013368101;XP_013368102 MODEL 9050400 protein-coding Cgas cyclic GMP-AMP synthase ENCODES a protein that exhibits 2',3'-cyclic GMP-AMP synthase activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955493 8593104 8607297 - 102009194 AGCD01061315;GBBH01048234;GBCE01080276;XM_005405328 XP_005405385 MODEL 39132043 rrna 5S_rRNA 5S ribosomal RNA 39134355 misc_rna 7SK 7SK RNA 8995596 protein-coding Eapp E2F associated phosphoprotein INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 26383618 26411738 + 102007089 AGCD01010180;GBDF01004579;XM_005376941 XP_005376998 MODEL 39134053 misc_rna 7SK 7SK RNA 8814462 protein-coding Clrn3 clarin 3 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog) NW_004955477 5663188 5676430 - 102014560 AGCD01055598;GBCQ01010623;XM_005402012 XP_005402069 MODEL 8916717 protein-coding Ifrd1 interferon related developmental regulator 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); glial cell proliferation (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Breast Cancer, Familial (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955410 16176431 16222006 + 102015613 AGCD01010950;AGCD01010951;GBDK01098501;XM_005377320;XM_013510565;XM_013510566;XM_013510567 XP_005377377;XP_013366019;XP_013366020;XP_013366021 MODEL 8742739 ncrna LOC102003823 uncharacterized LOC102003823 NW_004955403 768478 771303 + 102003823 AGCD01001708;GBDI01035702;XR_259130 MODEL 9026073 ncrna LOC102004534 uncharacterized LOC102004534 NW_004955402 4403382 4407335 + 102004534 AGCD01000122;GBCQ01155602;XR_259024;XR_259025 MODEL 9066203 protein-coding LOC102009638 olfactory receptor 5M11-like NW_004955511 1723110 1724093 + 102009638 AGCD01066377;XM_005407974 XP_005408031 MODEL 8836712 pseudo LOC102005578 Y+L amino acid transporter 2 pseudogene NW_004955466 2383953 2385889 - 102005578 AGCD01050736 MODEL 9011052 protein-coding Fbxo9 F-box protein 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); innate immune response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955411 2960517 2993787 - 102012617 AGCD01011528;AGCD01011529;AGCD01011530;GBBH01118710;XM_005377610 XP_005377667 MODEL 10238320 ncrna LOC106149936 uncharacterized LOC106149936 NW_004955458 13881726 13893278 + 106149936 AGCD01047815;GBDF01247795;XR_001236433;XR_001236434 MODEL 8847705 protein-coding Cimap1c ciliary microtubule associated protein 1C ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog) NW_004955450 2614377 2617064 - 102024866 AGCD01042389;GBDJ01260584;XM_005393499 XP_005393556 MODEL 8814640 protein-coding Kcnj16 potassium inwardly rectifying channel subfamily J member 16 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); regulation of pH (ortholog); ASSOCIATED WITH Brugada syndrome 1 (ortholog); first-degree atrioventricular block (ortholog); hypokalemia (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955478 2775702 2833821 - 102022077 AGCD01055804;AGCD01055805;GBDI01327287;XM_005402101;XM_005402102;XM_005402103;XM_013503245 XP_005402158;XP_005402159;XP_005402160;XP_013358699 MODEL 8874397 pseudo LOC102006654 40S ribosomal protein SA-like NW_004955414 3111109 3159323 + 102006654 AGCD01014815;AGCD01014816 MODEL 8769669 ncrna LOC102011584 uncharacterized LOC102011584 NW_004955436 18651414 18692957 + 102011584 AGCD01033976;AGCD01033977;AGCD01033978;GBDF01154303;XR_001234938;XR_001234939 MODEL 8812122 protein-coding Adamdec1 ADAM like decysin 1 INVOLVED IN cell differentiation (ortholog); extracellular matrix organization (ortholog); inflammatory response (ortholog) NW_004955403 47421102 47439501 + 102016876 AGCD01002889;GBDF01074355;XM_005373906 XP_005373963 MODEL 8852583 protein-coding Btbd17 BTB domain containing 17 ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955553 1247702 1271777 - 102008771 AGCD01072873;AGCD01072874;AGCD01072875;AGCD01072876;GBCB01111017;XM_005412235;XM_013508637;XM_013508638 XP_005412292;XP_013364091;XP_013364092 MODEL 9038898 pseudo LOC102007037 polyprenol reductase-like NW_004955426 12589238 12590965 + 102007037 AGCD01026340 MODEL 8724309 protein-coding Hsf5 heat shock transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription repressor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog); XY body (ortholog) NW_004955451 4564576 4601868 + 102025309 AGCD01043131;AGCD01043132;AGCD01043133;GBDF01053109;GBDF01053111;XM_013519059 XP_013374513 MODEL 8768286 protein-coding Eif1ax eukaryotic translation initiation factor 1A X-linked INVOLVED IN ribosome assembly (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH diffuse midline glioma, H3 K27M-mutant (ortholog); disease of cellular proliferation (ortholog); hepatocellular carcinoma (ortholog); FOUND IN eukaryotic 43S preinitiation complex (ortholog); eukaryotic 48S preinitiation complex (ortholog); multi-eIF complex (ortholog) NW_004955509 577975 594028 - 102006801 AGCD01065937;GBBH01065130;XM_005407808 XP_005407865 MODEL 8930747 pseudo LOC102021766 ribosome biogenesis protein BRX1 homolog NW_004955418 2267162 2269572 + 102021766 AGCD01018753 MODEL 8798141 protein-coding Dhx8 DEAH-box helicase 8 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 16941422 16963690 + 102004549 AGCD01043713;AGCD01043714;GBDF01047527;XM_005394503 XP_005394560 MODEL 9049610 ncrna LOC102009262 uncharacterized LOC102009262 NW_004955411 32414637 32423545 - 102009262 AGCD01012315;AGCD01012316;AGCD01012317;GBCQ01032791;XR_001232824;XR_259951 MODEL 8873585 protein-coding Triml2 tripartite motif family like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to retinoic acid (ortholog) NW_004955403 21089194 21104840 + 102006531 AGCD01002180;GBDF01242145;XM_013514804 XP_013370258 MODEL 8795519 protein-coding LOC102010393 uncharacterized LOC102010393 NW_004955428 1963436 1974145 + 102010393 AGCD01027626;GBBH01018275;XM_005386840 XP_005386897 MODEL 9042091 protein-coding Il36rn interleukin 36 receptor antagonist INVOLVED IN antifungal humoral response (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); negative regulation of interleukin-17 production (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955470 1209389 1214730 - 102021960 AGCD01052630;GBCC01027722;XM_005400588;XM_013522678 XP_005400645;XP_013378132 MODEL 8700225 protein-coding Col22a1 collagen type XXII alpha 1 chain ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955461 12596449 12870853 - 102003950 AGCD01049020;AGCD01049021;AGCD01049022;AGCD01049023;AGCD01049024;GBCB01111979;GBCB01111980;XM_013521350 XP_013376804 MODEL 9044833 protein-coding Enam enamelin ENCODES a protein that exhibits structural constituent of tooth enamel (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1B (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955447 2331251 2345459 - 102025189 AGCD01040538;JN414625;XM_013518491 AEP18526;XP_013373945 MODEL 8717173 protein-coding LOC102008165 filaggrin-2 NW_004955589 115942 127045 + 102008165 AGCD01076155;AGCD01076156;GBCC01029912;XM_005414527;XM_013509950;XM_013509951 XP_005414584;XP_013365404;XP_013365405 MODEL 9019891 pseudo LOC102011172 translationally-controlled tumor protein pseudogene NW_004955405 31816779 31817304 - 102011172 AGCD01005306;XM_005374671 MODEL 8930409 protein-coding Gdf7 growth differentiation factor 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); axon guidance (ortholog); BMP signaling pathway (ortholog); FOUND IN extracellular region (ortholog) NW_004955469 3134355 3149177 + 102027836 AGCD01052290;AGCD01052291;AGCD01052292;GBDF01101331;XM_013522564 XP_013378018 MODEL 8894559 protein-coding Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); muscle cell development (ortholog); neuromuscular junction development (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynaptic active zone membrane (ortholog); voltage-gated calcium channel complex (ortholog) NW_004955532 2163529 2283509 - 102007694 AGCD01070221;AGCD01070222;GBDI01289999;XM_005410276;XM_005410278;XM_005410279;XM_005410280;XM_005410281;XM_005410282;XM_005410283;XM_005410284;XM_013507588;XM_013507589;XM_013507590;XM_013507591 XP_005410333;XP_005410335;XP_005410336;XP_005410337;XP_005410338;XP_005410339;XP_005410340;XP_005410341;XP_013363042;XP_013363043;XP_013363044;XP_013363045 MODEL 39131855 rrna 5S_rRNA 5S ribosomal RNA 8998189 protein-coding Cdh11 cadherin 11 INVOLVED IN aortic valve formation (ortholog); cell migration (ortholog); cell-substrate adhesion (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Elsahy-Waters syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955433 21613909 21770968 - 102019097 AGCD01031928;AGCD01031929;AGCD01031930;GBCE01004160;XM_005388459;XM_005388460;XM_013516243 XP_005388516;XP_005388517;XP_013371697 MODEL 8720990 pseudo LOC102008519 mitochondrial import inner membrane translocase subunit TIM14-like NW_004955412 23530210 23530974 + 102008519 AGCD01013090 MODEL 8719921 ncrna LOC102012800 uncharacterized LOC102012800 NW_004955436 20441094 20445316 - 102012800 AGCD01034024;GBCB01036539;XR_261802 MODEL 8927254 protein-coding Cenpu centromere protein U INVOLVED IN chordate embryonic development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); inner kinetochore (ortholog) NW_004955403 24245197 24278631 + 102004661 AGCD01002271;GBBH01173741;XM_005373484 XP_005373541 MODEL 8838711 protein-coding Erich3 glutamate rich 3 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955423 18009243 18110340 + 102028651 AGCD01023866;GBDI01375173;XM_005385238;XM_005385239 XP_005385295;XP_005385296 MODEL 8880324 protein-coding Aldh9a1 aldehyde dehydrogenase 9 family member A1 ENCODES a protein that exhibits 4-trimethylammoniobutyraldehyde dehydrogenase activity (ortholog); acetaldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955462 10998147 11017360 + 102004148 AGCD01049381;AGCD01049382;AGCD01049383;GBCQ01009425;GBDF01000076;XM_013521373 XP_013376827 MODEL 39132044 rrna 5S_rRNA 5S ribosomal RNA 39133919 misc_rna 7SK 7SK RNA 9001933 protein-coding Clspn claspin ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); DNA secondary structure binding (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA replication checkpoint signaling (ortholog); mitotic DNA replication checkpoint signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 13801073 13842387 - 102022561 AGCD01044435;AGCD01044436;AGCD01044437;GBDI01166470;XM_013519608;XM_013519609 XP_013375062;XP_013375063 MODEL 39133766 misc_rna 7SK 7SK RNA 8863957 protein-coding Atp6v0b ATPase H+ transporting V0 subunit b ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) NW_004955537 3501011 3504408 + 102009217 AGCD01070959;GBDI01001300;XM_005410694 XP_005410751 MODEL 8963940 protein-coding LOC102005583 apolipoprotein L2-like NW_004955413 22371700 22393689 - 102005583 AGCD01014294;AGCD01014295;AGCD01014296;AGCD01014297;AGCD01014298;AGCD01014299;XM_005379646 XP_005379703 MODEL 8836636 protein-coding Acad8 acyl-CoA dehydrogenase family member 8 ENCODES a protein that exhibits short-chain 2-methyl fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955412 35067637 35083889 + 102030402 AGCD01013397;AGCD01013398;AGCD01013399;GBCQ01063988;XM_005378593;XM_005378594;XM_005378595 XP_005378650;XP_005378651;XP_005378652 MODEL 8871021 protein-coding Ankrd30a ankyrin repeat domain 30A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955546 798445 890288 + 102029226 AGCD01072025;AGCD01072026;AGCD01072027;AGCD01072028;AGCD01072029;AGCD01072030;AGCD01072031;AGCD01072032;GBDJ01277982;XM_013508375;XM_013508376;XM_013508377;XM_013508378;XM_013508379;XM_013508380;XM_013508381 XP_013363829;XP_013363830;XP_013363831;XP_013363832;XP_013363833;XP_013363834;XP_013363835 MODEL 8892077 ncrna LOC102006656 uncharacterized LOC102006656 NW_004955415 5972499 5982441 - 102006656 AGCD01016005;GBDJ01024058;XR_260272 MODEL 10366618 ncrna LOC106149937 uncharacterized LOC106149937 NW_004955458 6316072 6320403 + 106149937 AGCD01047557;GBBH01013693;XR_001236435;XR_001236436 MODEL 8813745 protein-coding Izumo4 IZUMO family member 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955495 6014852 6018342 - 102019821 AGCD01062046;GBDF01001768;XM_005405931;XM_013505262;XM_013505263;XM_013505264;XM_013505265;XM_013505266;XM_013505267;XR_001231371 XP_005405988;XP_013360716;XP_013360717;XP_013360718;XP_013360719;XP_013360720;XP_013360721 MODEL 8919601 protein-coding Apobec2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cytidine to uridine editing (ortholog); mRNA modification (ortholog); positive regulation of gene expression via chromosomal CpG island demethylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955437 7725092 7735892 + 102008768 AGCD01034465;GBCB01003930;XM_005389676 XP_005389733 MODEL 8922190 protein-coding Gramd1c GRAM domain containing 1C ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN intracellular cholesterol transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog); plasma membrane (ortholog) NW_004955427 13957746 14044473 + 102007253 AGCD01027262;AGCD01027263;AGCD01027264;GBDF01249293;XM_005386407 XP_005386464 MODEL 8786989 protein-coding Aff4 ALF transcription elongation factor 4 INVOLVED IN response to endoplasmic reticulum stress (ortholog); spermatid development (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); autism spectrum disorder (ortholog); bone development disease (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); fibrillar center (ortholog) NW_004955408 4247730 4305194 - 102007409 AGCD01008099;GBDI01117383;XM_013508370 XP_013363824 MODEL 8828318 ncrna LOC102017678 uncharacterized LOC102017678 NW_004955423 6813818 6814536 - 102017678 AGCD01023587;GBDK01199497;XR_260958 MODEL 9062637 protein-coding Hsh2d hematopoietic SH2 domain containing ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of B cell apoptotic process (ortholog); negative regulation of mitochondrial depolarization (ortholog); T cell activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955524 1392805 1399662 - 102023629 AGCD01068749;GBDI01217878;XM_005409486;XM_005409489 XP_005409543;XP_005409546 MODEL 9020238 ncrna LOC102021768 uncharacterized LOC102021768 NW_004955484 9693663 9696787 + 102021768 AGCD01058425;GBDF01223320;XR_263900 MODEL 8984129 protein-coding Cct2 chaperonin containing TCP1 subunit 2 ENCODES a protein that exhibits protein folding chaperone (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); chaperone-mediated protein complex assembly (ortholog); positive regulation of protein localization to Cajal body (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell body (ortholog); chaperonin-containing T-complex (ortholog); cytoplasm (ortholog) NW_004955405 9892089 9904407 + 102025317 AGCD01004798;AGCD01004799;GBDF01002357;XM_005374301 XP_005374358 MODEL 8908808 ncrna LOC102004159 uncharacterized LOC102004159 NW_004955416 4090802 4096376 - 102004159 AGCD01016880;AGCD01016881;GBDF01075670;XR_001233284;XR_260352;XR_260353 MODEL 8863502 protein-coding Cggbp1 CGG triplet repeat binding protein 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 5434954 5443713 + 102023002 AGCD01006914;AGCD01006915;GBBH01152254;XM_005375528;XM_005375529;XM_013503658 XP_005375585;XP_005375586;XP_013359112 MODEL 9059247 pseudo LOC102009264 mitochondrial import inner membrane translocase subunit Tim9 pseudogene NW_004955412 19546401 19547571 - 102009264 AGCD01012960 MODEL 8708441 protein-coding Ccdc33 coiled-coil domain containing 33 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN peroxisome (ortholog) NW_004955450 3485789 3576768 - 102015260 AGCD01042436;GBDK01395390;XM_005393560;XM_005393569;XM_005393570;XM_013519027;XM_013519028;XM_013519029;XM_013519030;XM_013519031;XM_013519032;XM_013519033;XM_013519034;XM_013519035 XP_005393617;XP_005393626;XP_005393627;XP_013374481;XP_013374482;XP_013374483;XP_013374484;XP_013374485;XP_013374486;XP_013374487;XP_013374488;XP_013374489 MODEL 39134054 misc_rna 7SK 7SK RNA 8708707 protein-coding Ears2 glutamyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); glutamate-tRNA(Gln) ligase activity (ortholog); INVOLVED IN glutamyl-tRNA aminoacylation (ortholog); tRNA aminoacylation for mitochondrial protein translation (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH aphasia (ortholog); Cardiac Arrhythmias (ortholog); Cognitive Dysfunction (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955493 2083272 2113403 - 102021021 AGCD01060925;AGCD01060926;GBCQ01035758;XM_005405096;XM_013504806;XM_013504807;XM_013504808 XP_005405153;XP_013360260;XP_013360261;XP_013360262 MODEL 8964013 protein-coding Il3ra interleukin 3 receptor subunit alpha ENCODES a protein that exhibits interleukin-3 binding (ortholog); interleukin-3 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-3-mediated signaling pathway (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955499 1004432 1011950 + 102007248 AGCD01063305;GBBH01025894;GBCE01069501;XM_013505601 XP_013361055 MODEL 8710272 protein-coding Ifrd2 interferon related developmental regulator 2 ENCODES a protein that exhibits ribosome binding (ortholog); translation repressor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); negative regulation of translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog) NW_004955532 2101202 2106779 - 102028796 AGCD01070216;AGCD01070217;GBCB01001546;XM_005410255 XP_005410312 MODEL 8740620 protein-coding Lin52 lin-52 DREAM MuvB core complex component ASSOCIATED WITH sarcoma (ortholog) NW_004955523 1250551 1344434 - 102022007 AGCD01068512;AGCD01068513;AGCD01068514;GBCB01055923;XM_005409403;XM_005409404;XM_005409405 XP_005409460;XP_005409461;XP_005409462 MODEL 8848102 pseudo LOC102008167 sorting nexin-2-like NW_004955402 45656377 45658152 - 102008167 AGCD01001141 MODEL 8841304 protein-coding Enc1 ectodermal-neural cortex 1 INVOLVED IN negative regulation of translation (ortholog); positive regulation of neuron projection development (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955425 26017684 26029262 + 102003987 AGCD01025940;GBDF01251229;XM_005386066 XP_005386123 MODEL 9044096 protein-coding Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cardiac muscle cell action potential (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Andersen-Tawil syndrome (ortholog); Arsenic Poisoning (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955478 2734795 2745217 - 102021553 AGCD01055802;GBBH01082277;XM_005402099;XM_005402100 XP_005402156;XP_005402157 MODEL 8904732 protein-coding Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ENCODES a protein that exhibits heparin binding (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN cellular response to parathyroid hormone stimulus (ortholog); cellular response to prostaglandin E stimulus (ortholog); cellular response to vitamin D (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basement membrane (ortholog); cytoplasmic vesicle (ortholog); extracellular matrix (ortholog) NW_004955407 26524487 26533038 - 102021627 AGCD01007530;GBDJ01129838;XM_005375601 XP_005375658 MODEL 8812611 ncrna LOC102007038 uncharacterized LOC102007038 NW_004955427 4191968 4222744 + 102007038 AGCD01026962;GBDF01207463;XR_261229 MODEL 10359836 protein-coding Btbd18 BTB domain containing 18 INVOLVED IN male meiosis I (ortholog); piRNA transcription (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) NW_004955511 2641848 2647679 - 106146243 AGCD01066422;XM_013506440 XP_013361894 MODEL 8756777 ncrna LOC102008525 uncharacterized LOC102008525 NW_004955414 26180989 26187857 + 102008525 AGCD01015640;GBDF01208439;XR_260197 MODEL 39134356 misc_rna 7SK 7SK RNA 8750346 protein-coding LOC102009639 BBSome-interacting protein 1-like NW_004955430 6423139 6423588 - 102009639 AGCD01029292;GBCC01033208;XM_005387391;XM_013515616 XP_005387448;XP_013371070 MODEL 8849507 protein-coding Hsp90aa1 heat shock protein 90 alpha family class A member 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to heat (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anaplastic large cell lymphoma (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); axonal growth cone (ortholog); basolateral plasma membrane (ortholog) NW_004955538 1469544 1475010 - 102026352 AGCD01071063;GBCE01002351;GBDK01018086;XM_005410736 XP_005410793 MODEL 39132045 rrna 5S_rRNA 5S ribosomal RNA 9029469 pseudo LOC102011585 small ubiquitin-related modifier 2 pseudogene NW_004955437 7866518 7866791 + 102011585 AGCD01034470 MODEL 8821423 protein-coding Erich4 glutamate rich 4 ASSOCIATED WITH thymoma (ortholog) NW_004955555 369918 373848 + 102018655 AGCD01073025;AGCD01073026;GBDI01212353;XM_005412351;XR_001232313 XP_005412408 MODEL 8870362 protein-coding LOC102011176 keratin-associated protein 20-2-like NW_004955407 30259322 30259501 + 102011176 AGCD01007630;XM_005375653 XP_005375710 MODEL 8772683 protein-coding Gdf9 growth differentiation factor 9 INVOLVED IN blastocyst development (ortholog); embryonic cleavage (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); polycystic ovary syndrome (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog) NW_004955408 4234208 4239795 - 102016569 AGCD01008098;AGCD01008099;GBCB01038530;GBDF01127692;XM_013508374;XM_013508382 XP_013363828;XP_013363836 MODEL 39131857 rrna 5S_rRNA 5S ribosomal RNA 8700638 protein-coding Cdh12 cadherin 12 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog) NW_004955426 9652418 10610762 - 102015218 AGCD01026253;AGCD01026254;AGCD01026255;AGCD01026256;AGCD01026257;AGCD01026258;AGCD01026259;AGCD01026260;AGCD01026261;AGCD01026262;AGCD01026263;AGCD01026264;AGCD01026265;AGCD01026266;AGCD01026267;AGCD01026268;AGCD01026269;AGCD01026270;AGCD01026271;AGCD01026272;AGCD01026273;AGCD01026274;AGCD01026275;AGCD01026276;GBDK01336238;XM_005386141 XP_005386198 MODEL 8808458 protein-coding Dhx9 DExH-box helicase 9 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 3'-5' DNA/RNA helicase activity (ortholog); 3'-5' RNA helicase activity (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to heat (ortholog); PARTICIPATES IN aldosterone signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant intellectual developmental disorder 75 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); CRD-mediated mRNA stability complex (ortholog) NW_004955406 21697813 21743551 + 102021089 AGCD01006141;AGCD01006142;GBDK01082941;XM_005375015;XM_005375016 XP_005375072;XP_005375073 MODEL 8846477 protein-coding Eif1b eukaryotic translation initiation factor 1B ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955420 29514067 29515362 - 102013617 AGCD01021508;GBDF01155369;GBDJ01141903;XM_005383580 XP_005383637 MODEL 8818709 protein-coding Acad9 acyl-CoA dehydrogenase family member 9 ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); medium-chain fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN long-chain fatty acid metabolic process (ortholog); medium-chain fatty acid metabolic process (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog); cervical cancer (ortholog); FOUND IN dendrite (ortholog); mitochondrial complex I intermediate assembly complex (ortholog); mitochondrial membrane (ortholog) NW_004955450 10576615 10603779 - 102013463 AGCD01042627;GBDJ01180620;XM_005393740;XM_013518917 XP_005393797;XP_013374371 MODEL 8743448 protein-coding Cacna2d3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); regulation of presynapse organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynaptic active zone membrane (ortholog) NW_004955430 4091308 4939899 + 102006487 AGCD01029241;AGCD01029242;AGCD01029243;AGCD01029244;AGCD01029245;AGCD01029246;AGCD01029247;AGCD01029248;AGCD01029249;AGCD01029250;GBCE01166764;GBDJ01394632;XM_013515709;XM_013515710;XM_013515711 XP_013371163;XP_013371164;XP_013371165 MODEL 8837515 ncrna LOC102012801 uncharacterized LOC102012801 NW_004955437 8031121 8040440 - 102012801 AGCD01034477;GBDF01226069;XR_261867 MODEL 9066864 protein-coding LOC102003827 beta-defensin 130-like NW_004955403 53263393 53266892 - 102003827 AGCD01003047;GBDF01142643;XM_005373831 XP_005373888 MODEL 9032194 protein-coding Gramd2a GRAM domain containing 2A ENCODES a protein that exhibits endoplasmic reticulum-plasma membrane adaptor activity (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN regulation of store-operated calcium entry (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); organelle membrane contact site (ortholog); plasma membrane (ortholog) NW_004955450 4936357 4960643 + 102005431 AGCD01042486;AGCD01042487;GBDK01013410;XM_005393624 XP_005393681 MODEL 9043111 protein-coding Col23a1 collagen type XXIII alpha 1 chain ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); collagen type XXIII trimer (ortholog); extracellular region (ortholog) NW_004955408 1771547 2034458 + 102011742 AGCD01007977;AGCD01007978;AGCD01007979;AGCD01007980;AGCD01007981;AGCD01007982;AGCD01007983;AGCD01007984;AGCD01007985;GBDK01183022;XM_013507342 XP_013362796 MODEL 9040141 protein-coding Cenpv centromere protein V ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN ameboidal-type cell migration (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); kinetochore (ortholog); microtubule cytoskeleton (ortholog) NW_004955467 1657765 1669758 - 102029494 AGCD01051272;GBBH01005792;GBCQ01068615;XM_013522048 XP_013377502 MODEL 10303346 ncrna LOC102004537 uncharacterized LOC102004537 NW_004955450 329137 331150 - 102004537 AGCD01042328;GBDF01061386;XR_001235908;XR_001235909 MODEL 8827968 protein-coding Trio trio Rho guanine nucleotide exchange factor ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of fat cell differentiation (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955426 3647273 3846916 + 102008555 AGCD01026083;AGCD01026084;GBCQ01175997;XM_005386123;XM_013514974 XP_005386180;XP_013370428 MODEL 8831496 protein-coding Ccdc34 coiled-coil domain containing 34 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN sperm end piece (ortholog); sperm head-tail coupling apparatus (ortholog); sperm midpiece (ortholog) NW_004955476 6589506 6604070 - 102015837 AGCD01055335;AGCD01055336;GBBH01140938;GBBH01140941;XM_013502966 XP_013358420 MODEL 9006538 protein-coding Cgn cingulin ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); epithelial cell morphogenesis (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN apical junction complex (ortholog); bicellular tight junction (ortholog); brush border (ortholog) NW_004955589 855715 881123 - 102020623 AGCD01076183;GBCQ01070264;XM_005414571;XM_013509956;XM_013509957;XM_013509958 XP_005414628;XP_013365410;XP_013365411;XP_013365412 MODEL 9023084 protein-coding Aldoa aldolase, fructose-bisphosphate A ENCODES a protein that exhibits fructose-bisphosphate aldolase activity (ortholog); protease binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular response to glucose starvation (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH cystadenoma (ortholog); hereditary fructose intolerance syndrome (ortholog); spondylocostal dysostosis 5 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955493 6904931 6910682 - 102023923 AGCD01061147;GBDI01013338;XM_005405193;XM_005405194;XM_013504781 XP_005405250;XP_005405251;XP_013360235 MODEL 39133767 misc_rna 7SK 7SK RNA 8775840 protein-coding Il4 interleukin 4 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN B cell costimulation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to mercury ion (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-12 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Hepatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); interleukin-4 receptor complex (ortholog) NW_004955408 4058052 4065999 + 102015609 AGCD01008086;XM_013507371 XP_013362825 MODEL 8963946 ncrna LOC102005587 uncharacterized LOC102005587 NW_004955470 11311958 11314586 - 102005587 AGCD01052885;GBDF01111978;XR_263502 MODEL 8946332 pseudo LOC102006657 anion exchange transporter-like NW_004955474 8327235 8329031 - 102006657 AGCD01054549 MODEL 153211030 protein-coding CASP8AP2 caspase 8 associated protein 2 8954133 protein-coding Ankrd31 ankyrin repeat domain 31 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation involved in reciprocal meiotic recombination (ortholog); positive regulation of meiotic DNA double-strand break formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955425 25483400 25647904 + 102027087 AGCD01025921;AGCD01025922;AGCD01025923;AGCD01025924;AGCD01025925;GBDF01023868;XM_013514798 XP_013370252 MODEL 9052013 pseudo LOC102010394 heterogeneous nuclear ribonucleoprotein K pseudogene NW_004955429 5495670 5504446 - 102010394 AGCD01028516;AGCD01028517 MODEL 9026956 pseudo LOC102017679 60S ribosomal protein L26 pseudogene NW_004955423 7248916 7249482 + 102017679 AGCD01023595 MODEL 39131433 protein-coding CIMAP1D CIMAP1 family member D 8762622 pseudo LOC102003830 lysophospholipid acyltransferase LPCAT4 pseudogene NW_004955404 19109521 19111476 - 102003830 AGCD01003637 MODEL 9046681 ncrna LOC102009265 uncharacterized LOC102009265 NW_004955412 20503994 20512991 + 102009265 AGCD01013010;GBDF01155155;XR_260005 MODEL 39134357 misc_rna 7SK 7SK RNA 8945418 protein-coding Ebag9 estrogen receptor binding site associated antigen 9 INVOLVED IN adaptive immune memory response involving T cells and B cells (ortholog); T cell mediated cytotoxicity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog); secretory granule (ortholog) NW_004955417 16941035 16958876 + 102024334 AGCD01018278;AGCD01018279;GBDF01089049;XM_013512747 XP_013368201 MODEL 8813783 protein-coding Hsp90ab1 heat shock protein 90 alpha family class B member 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent protein binding (ortholog); CTP binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to interleukin-4 (ortholog); chaperone-mediated protein complex assembly (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Female Infertility (ortholog); FOUND IN apical plasma membrane (ortholog); aryl hydrocarbon receptor complex (ortholog); axonal growth cone (ortholog) NW_004955437 9872649 9878459 + 102020377 AGCD01034548;GBDK01013019;XM_005389809;XM_013516839 XP_005389866;XP_013372293 MODEL 8999415 protein-coding Endod1 endonuclease domain containing 1 INVOLVED IN DNA repair (ortholog); double-strand break repair (ortholog); homologous recombination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955412 61280 65352 + 102009816 AGCD01012480;GBDJ01177795;XM_013511207 XP_013366661 MODEL 8799146 protein-coding Ift122 intraflagellar transport 122 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); cilium assembly (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); Cardiac Edema (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); ciliary transition zone (ortholog) NW_004955429 17795757 17858609 - 102013526 AGCD01028867;AGCD01028868;GBDF01044513;XM_005387088;XM_005387089;XM_005387090 XP_005387145;XP_005387146;XP_005387147 MODEL 8997938 protein-coding Erich5 glutamate rich 5 NW_004955417 13776609 13804241 + 102009607 AGCD01018191;GBDI01354833;XM_005381845;XM_005381846 XP_005381902;XP_005381903 MODEL 8781826 protein-coding Jade1 jade family PHD finger 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K16 acetyltransferase activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of cell cycle (ortholog); FOUND IN chromosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955428 12762629 12835310 - 102028776 AGCD01027933;AGCD01027934;AGCD01027935;GBDK01233591;XM_005386724;XM_005386725;XM_005386726;XM_005386727;XM_005386728;XM_005386729;XM_005386730;XM_005386731;XM_013515275 XP_005386781;XP_005386782;XP_005386783;XP_005386784;XP_005386785;XP_005386786;XP_005386787;XP_005386788;XP_013370729 MODEL 8749748 protein-coding Kcnj3 potassium inwardly rectifying channel subfamily J member 3 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN potassium ion import across plasma membrane (ortholog); response to electrical stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); inward rectifier potassium channel complex (ortholog) NW_004955440 19716081 19836957 + 102012129 AGCD01036643;AGCD01036644;AGCD01036645;GBBH01015925;XM_005390821;XM_005390822 XP_005390878;XP_005390879 MODEL 9016077 protein-coding Afg1l AFG1 like ATPase INVOLVED IN mitochondrial protein catabolic process (ortholog); mitochondrial protein quality control (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955411 33386568 33617721 + 102011418 AGCD01012355;AGCD01012356;AGCD01012357;AGCD01012358;AGCD01012359;AGCD01012360;AGCD01012361;AGCD01012362;AGCD01012363;AGCD01012364;AGCD01012365;AGCD01012366;AGCD01012367;AGCD01012368;AGCD01012369;AGCD01012370;AGCD01012371;AGCD01012372;AGCD01012373;GBDF01055437;XM_005377845;XM_005377846;XM_013510900 XP_005377902;XP_005377903;XP_013366354 MODEL 39131858 rrna 5S_rRNA 5S ribosomal RNA 8892963 protein-coding Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif 10 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955563 861355 878633 + 102008780 AGCD01074094;GBCE01095643;GBDI01262621;XM_005413109 XP_005413166 MODEL 8751617 protein-coding LOC102004164 coiled-coil domain-containing protein 92 NW_004955481 559327 573930 + 102004164 AGCD01056795;AGCD01056796;AGCD01056797;XM_005402916 XP_005402973 MODEL 9025431 protein-coding LOC102021770 arylacetamide deacetylase-like 4 NW_004955486 1044485 1053799 + 102021770 AGCD01058918;GBCC01033407;XM_005403942;XM_005403943 XP_005403999;XP_005404000 MODEL 8868661 protein-coding Btbd19 BTB domain containing 19 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955464 13401388 13416924 - 102008074 AGCD01050274;AGCD01050275;GBDJ01381390;XM_005398728;XM_005398729;XM_005398730;XM_013521629 XP_005398785;XP_005398786;XP_005398787;XP_013377083 MODEL 9057612 protein-coding Cct3 chaperonin containing TCP1 subunit 3 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell body (ortholog); chaperonin-containing T-complex (ortholog); microtubule (ortholog) NW_004955545 2444988 2460976 - 102026262 AGCD01071901;GBDJ01010937;XM_005411673 XP_005411730 MODEL 8983252 protein-coding Clstn1 calsyntenin 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); kinesin binding (ortholog); X11-like protein binding (ortholog); INVOLVED IN neurotransmitter receptor transport to postsynaptic membrane (ortholog); regulation of cell growth (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) NW_004955486 3706969 3813858 + 102021672 AGCD01059036;AGCD01059037;AGCD01059038;GBCB01098444;GBDF01048171;XM_013504165 XP_013359619 MODEL 39134055 misc_rna 7SK 7SK RNA 39133920 misc_rna 7SK 7SK RNA 9010888 protein-coding LOC102008168 vomeronasal type-1 receptor 2-like NW_004955603 429287 430189 - 102008168 AGCD01076845;XM_005414839 XP_005414896 MODEL 8744666 protein-coding Cenpw centromere protein W INVOLVED IN chromosome organization (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) NW_004955436 7557595 7563238 + 102005412 AGCD01033708;GBDK01214350;XM_005389164 XP_005389221 MODEL 39132046 rrna 5S_rRNA 5S ribosomal RNA 8769321 protein-coding Atp6v0c ATPase H+ transporting V0 subunit c ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); proton transmembrane transporter activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); negative regulation of autophagic cell death (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH early-onset epilepsy 3 (ortholog); epilepsy (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN lysosomal membrane (ortholog); lysosomal proton-transporting V-type ATPase complex (ortholog); membrane (ortholog) NW_004955442 14791795 14798066 - 102022127 AGCD01037839;GBCB01005064;XM_005391424 XP_005391481 MODEL 8893515 pseudo LOC102004538 nuclease-sensitive element-binding protein 1 pseudogene NW_004955591 118340 236564 + 102004538 AGCD01076245;AGCD01076246;AGCD01076247;AGCD01076248;AGCD01076249;AGCD01076250 MODEL 8756748 protein-coding Ccdc38 coiled-coil domain containing 38 ENCODES a protein that exhibits ubiquitin-modified histone reader activity (ortholog); INVOLVED IN acrosome assembly (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); manchette (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955405 32242811 32285252 - 102006868 AGCD01005331;GBDF01049929;XM_005374488 XP_005374545 MODEL 8894279 protein-coding Apobec4 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 NW_004955406 22425097 22431148 - 102028935 AGCD01006158;GBDF01001541;XM_013521574 XP_013377028 MODEL 8942642 protein-coding Fbxw10b F-box and WD repeat domain containing 10B ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955467 2093067 2124507 + 102019583 AGCD01051300;AGCD01051301;AGCD01051302;GBDF01050485;XM_005399327;XM_005399328;XM_013522173 XP_005399384;XP_005399385;XP_013377627 MODEL 39133768 misc_rna 7SK 7SK RNA 8998006 ncrna LOC102011177 uncharacterized LOC102011177 NW_004955408 10359375 10380970 - 102011177 AGCD01008267;AGCD01008268;GBDF01237961;XR_259677 MODEL 10092747 pseudo LOC106149938 nuclear receptor-binding factor 2-like NW_004955458 4313033 4317638 - 106149938 AGCD01047404;AGCD01047405 MODEL 8768195 protein-coding Gdi1 GDP dissociation inhibitor 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); Rab GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of axonogenesis (ortholog); negative regulation of protein targeting to membrane (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); anemia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955580 935021 941081 + 102003189 AGCD01075630;GBBH01091858;XM_005414200;XM_013509689 XP_005414257;XP_013365143 MODEL 9040228 protein-coding Diablo diablo IAP-binding mitochondrial protein INVOLVED IN apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 64 (ortholog); brain ischemia (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955482 6354502 6364424 + 102007662 AGCD01057387;GBCE01031683;GBDK01080617;XM_005403097 XP_005403154 MODEL 9000120 pseudo LOC102010397 forkhead box protein H1 pseudogene NW_004955431 1005823 1006729 - 102010397 AGCD01029888 MODEL 8817542 protein-coding Eif2a eukaryotic translation initiation factor 2A ENCODES a protein that exhibits ribosome binding (ortholog); translation initiation factor activity (ortholog); tRNA binding (ortholog); INVOLVED IN positive regulation of signal transduction (ortholog); protein phosphorylation (ortholog); regulation of translation (ortholog); PARTICIPATES IN ceramide signaling pathway; endoplasmic reticulum stress - the unfolded protein response pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH borna disease (ortholog); dystonia 33 (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog) NW_004955448 1743060 1781401 + 102025064 AGCD01041267;GBDF01156554;XM_005393010 XP_005393067 MODEL 8862196 protein-coding LOC102008527 olfactory receptor 52N4-like NW_004955414 21703835 21704818 + 102008527 AGCD01015429;XM_013511734 XP_013367188 MODEL 8846598 protein-coding LOC102017681 microtubule-associated tumor suppressor candidate 2-like NW_004955497 8132720 8368038 + 102017681 AGCD01062697;AGCD01062698;AGCD01062699;AGCD01062700;AGCD01062701;AGCD01062702;AGCD01062703;AGCD01062704;GBDF01251346;XM_005406382 XP_005406439 MODEL 8987339 protein-coding Acadl acyl-CoA dehydrogenase long chain ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN carnitine catabolic process (ortholog); carnitine metabolic process, CoA-linked (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); long chain 3-hydroxyacyl-CoA dehydrogenase deficiency (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955457 5266032 5300632 + 102025215 AGCD01046815;GBCQ01006918;XM_013520783 XP_013376237 MODEL 9006941 protein-coding Trip10 thyroid hormone receptor interactor 10 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955495 2770449 2780650 - 102005157 AGCD01061799;GBCE01028494;XM_005405695;XM_005405697 XP_005405752;XP_005405754 MODEL 8903454 protein-coding LOC102009640 olfactory receptor 10AG1-like NW_004955511 857241 858197 - 102009640 AGCD01066345;XM_013506363 XP_013361817 MODEL 9014306 pseudo LOC102011588 uncharacterized LOC102011588 NW_004955437 2264085 2299089 - 102011588 AGCD01034263 MODEL 8970770 protein-coding Aldob aldolase, fructose-bisphosphate B ENCODES a protein that exhibits ATPase binding (ortholog); cytoskeletal protein binding (ortholog); fructose binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); fructose catabolic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; fructose and mannose metabolic pathway; fructosuria pathway; ASSOCIATED WITH autoimmune hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetes mellitus (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); microtubule organizing center (ortholog) NW_004955419 24377427 24389909 + 102008730 AGCD01020345;GBCQ01007633;XM_005382799 XP_005382856 MODEL 8969991 protein-coding LOC102007039 chromosome unknown open reading frame, human C4orf51 ASSOCIATED WITH stomach cancer (ortholog) NW_004955428 1503025 1543635 + 102007039 AGCD01027613;AGCD01027614;GBDF01008625;XM_005386650;XM_005386651;XM_005386652 XP_005386707;XP_005386708;XP_005386709 MODEL 8830743 protein-coding Gramd2b GRAM domain containing 2B ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasmic microtubule (ortholog) NW_004955521 4220325 4320452 + 102017267 AGCD01068256;AGCD01068257;AGCD01068258;AGCD01068259;GBDK01284185;XM_005409323;XM_005409325;XM_013507088;XM_013507089 XP_005409380;XP_005409382;XP_013362542;XP_013362543 MODEL 8768922 protein-coding LOC102005588 olfactory receptor 51L1-like NW_004955414 21113707 21117034 - 102005588 AGCD01015407;XM_005380493 XP_005380550 MODEL 9039345 protein-coding Ankrd33 ankyrin repeat domain 33 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955547 2263769 2269180 + 102028135 AGCD01072265;GBDK01351700;XM_013508507;XM_013508508;XM_013508509;XM_013508510;XM_013508511 XP_013363961;XP_013363962;XP_013363963;XP_013363964;XP_013363965 MODEL 8882041 protein-coding Casp9 caspase 9 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN response to auditory stimulus; apoptotic process (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN endometrial cancer pathway; intrinsic apoptotic pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN apoptosome (ortholog); caspase complex (ortholog); cytoplasm (ortholog) NW_004955527 2613691 2630217 + 102012799 AGCD01069457;GBDF01303502;XM_013507423 XP_013362877 MODEL 9025031 protein-coding Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cone dystrophy (ortholog); FOUND IN voltage-gated calcium channel complex (ortholog) NW_004955454 4329520 4430460 - 102026185 AGCD01045121;AGCD01045122;GBDF01238757;XM_005396111 XP_005396168 MODEL 8701712 protein-coding LOC102012802 uncharacterized LOC102012802 NW_004955541 36527 43417 + 102012802 AGCD01071344;GBDI01026247;XM_005410957;XM_013507937;XM_013507938 XP_005411014;XP_013363391;XP_013363392 MODEL 39131859 rrna 5S_rRNA 5S ribosomal RNA 8876171 ncrna LOC102004166 uncharacterized LOC102004166 NW_004955420 12275770 12281651 + 102004166 AGCD01020858;GBDK01325905;XR_001233691;XR_260708 MODEL 9058373 protein-coding LOC102003832 UDP-glucuronosyltransferase 1-8-like NW_004955453 2647244 2648138 - 102003832 AGCD01044635;GBDJ01098935;XM_005395700 XP_005395757 MODEL 8787079 pseudo LOC102009267 60S ribosomal protein L7a pseudogene NW_004955467 9883721 9884522 + 102009267 AGCD01051535 MODEL 39134358 misc_rna 7SK 7SK RNA 8800868 protein-coding Col24a1 collagen type XXIV alpha 1 chain INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955423 7990869 8292704 + 102022715 AGCD01023617;AGCD01023618;AGCD01023619;AGCD01023620;AGCD01023621;AGCD01023622;AGCD01023623;AGCD01023624;AGCD01023625;AGCD01023626;GBCE01069087;XM_005385132;XM_013514569;XM_013514570 XP_005385189;XP_013370023;XP_013370024 MODEL 8701912 protein-coding Il4i1 interleukin 4 induced 1 ENCODES a protein that exhibits L-amino-acid oxidase activity (ortholog); L-phenylalaine oxidase activity (ortholog); INVOLVED IN L-phenylalanine catabolic process (ortholog); L-tryptophan catabolic process (ortholog); L-tyrosine catabolic process (ortholog); PARTICIPATES IN Canavan disease pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); cervical cancer (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog); immunological synapse (ortholog) NW_004955559 1012634 1047051 + 102025183 AGCD01073626;GBDF01006554;XM_005412805;XM_005412806;XM_005412808;XM_013508954;XM_013508955;XM_013508956;XM_013508957;XM_013508958;XM_013508959;XM_013508960;XM_013508961;XM_013508962;XM_013508963;XM_013508964;XM_013508965 XP_005412862;XP_005412863;XP_005412865;XP_013364408;XP_013364409;XP_013364410;XP_013364411;XP_013364412;XP_013364413;XP_013364414;XP_013364415;XP_013364416;XP_013364417;XP_013364418;XP_013364419 MODEL 9024338 protein-coding LOC102021771 vomeronasal type-1 receptor 4-like NW_004955421 22001278 22002312 + 102021771 AGCD01022127;XM_005383835 XP_005383892 MODEL 8990249 protein-coding Cgnl1 cingulin like 1 INVOLVED IN actin filament organization (ortholog); angiogenesis (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); apical junction complex (ortholog); bicellular tight junction (ortholog) NW_004955450 16785358 16913718 - 102020624 AGCD01042853;AGCD01042854;GBDJ01137564;XM_005393852;XM_013518875 XP_005393909;XP_013374329 MODEL 8826537 pseudo LOC102008170 40S ribosomal protein S18-like NW_004955617 165313 165780 + 102008170 AGCD01077271 MODEL 8763414 protein-coding Lin54 lin-54 DREAM MuvB core complex component ENCODES a protein that exhibits minor groove of adenine-thymine-rich DNA binding (ortholog); transcription regulatory region nucleic acid binding (ortholog); INVOLVED IN nucleosome organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN RNA polymerase II transcription repressor complex (ortholog) NW_004955474 6600766 6660904 + 102003017 AGCD01054482;AGCD01054483;GBBH01221828;GBDF01220818;XM_005401388;XM_005401389 XP_005401445;XP_005401446 MODEL 8945640 ncrna LOC102006658 uncharacterized LOC102006658 NW_004955415 30510340 30526011 + 102006658 AGCD01016664;GBDF01195211;XR_001233255;XR_001233256;XR_001233257;XR_001233258 MODEL 39133769 misc_rna 7SK 7SK RNA 8806191 protein-coding Erich6 glutamate rich 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955448 1827296 1860699 - 102025958 AGCD01041270;GBDF01054023;XM_005393013;XM_013518579 XP_005393070;XP_013374033 MODEL 8773434 protein-coding Hsp90b1 heat shock protein 90 beta family member 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent protein folding chaperone (ortholog); INVOLVED IN actin rod assembly (ortholog); cellular response to ATP (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Diabetic Cardiomyopathies (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) NW_004955405 38629691 38645202 + 102007730 AGCD01005482;GBDK01018798;XM_005374578 XP_005374635 MODEL 9025000 protein-coding Kcnj4 potassium inwardly rectifying channel subfamily J member 4 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH lung adenocarcinoma (ortholog); Nerve Degeneration (ortholog); Parkinson's disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasmic vesicle membrane (ortholog); dendrite (ortholog) NW_004955413 24605887 24634524 - 102018276 AGCD01014372;AGCD01014373;GBDF01055412;XM_005379253;XM_005379254;XM_005379255;XM_005379256;XM_005379257 XP_005379310;XP_005379311;XP_005379312;XP_005379313;XP_005379314 MODEL 8893159 protein-coding Cimap1d CIMAP1 family member D ASSOCIATED WITH cholangiocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasmic microtubule (ortholog) NW_004955495 7210526 7214886 + 102017354 AGCD01062124;GBCB01051776;XM_013505063 XP_013360517 MODEL 9005430 protein-coding Diaph1 diaphanous related formin 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); actin nucleation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autoimmune hemolytic anemia (ortholog); autosomal dominant nonsyndromic deafness 1 (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) NW_004955415 12156152 12272961 + 102007112 AGCD01016185;AGCD01016186;AGCD01016187;GBCQ01066059;XM_005380730;XM_005380731;XM_013512217;XM_013512218 XP_005380787;XP_005380788;XP_013367671;XP_013367672 MODEL 8937886 protein-coding Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); cellular response to BMP stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955426 19146288 19471880 - 102027205 AGCD01026540;AGCD01026541;AGCD01026542;AGCD01026543;AGCD01026544;AGCD01026545;AGCD01026546;AGCD01026547;GBDJ01062082;XM_005386164 XP_005386221 MODEL 8800101 protein-coding Btbd2 BTB domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955495 6072112 6085180 + 102022403 AGCD01062049;AGCD01062050;GBBH01062338;GBDF01084039;XM_005405935 XP_005405992 MODEL 8818566 pseudo LOC102008528 density-regulated protein pseudogene NW_004955415 15527746 15528569 + 102008528 AGCD01016348 MODEL 39133921 misc_rna 7SK 7SK RNA 8706848 protein-coding Cct4 chaperonin containing TCP1 subunit 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hereditary sensory and autonomic neuropathy (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) NW_004955424 22088949 22108514 + 102019615 AGCD01024931;AGCD01024932;AGCD01024933;GBDF01009053;XM_005385733 XP_005385790 MODEL 8790851 protein-coding Cdh13 cadherin 13 ENCODES a protein that exhibits adiponectin binding (ortholog); cadherin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); cellular response to toxic substance (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); arteriosclerosis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); external side of plasma membrane (ortholog) NW_004955564 407120 1549880 - 102024622 AGCD01074204;AGCD01074205;AGCD01074206;AGCD01074207;AGCD01074208;AGCD01074209;AGCD01074210;AGCD01074211;AGCD01074212;AGCD01074213;AGCD01074214;AGCD01074215;AGCD01074216;AGCD01074217;AGCD01074218;AGCD01074219;AGCD01074220;AGCD01074221;AGCD01074222;AGCD01074223;AGCD01074224;AGCD01074225;AGCD01074226;GBCB01039476;XM_005413239;XM_013509197 XP_005413296;XP_013364651 MODEL 8945117 pseudo LOC102009643 tubulin alpha-1C chain-like NW_004955515 4374447 4376136 + 102009643 AGCD01067319 MODEL 8729767 protein-coding Cenpx centromere protein X ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); replication fork processing (ortholog); resolution of meiotic recombination intermediates (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955506 1149566 1151919 + 102019188 AGCD01065247;GBDI01079507;XM_013506049;XM_013506050 XP_013361503;XP_013361504 MODEL 9038680 protein-coding Acadm acyl-CoA dehydrogenase medium chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); identical protein binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN axon (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) NW_004955423 17173648 17199189 - 102025477 AGCD01023847;GBCQ01008487;XM_005385228 XP_005385285 MODEL 8884805 protein-coding Ccdc39 coiled-coil domain 39 molecular ruler complex subunit INVOLVED IN axonemal dynein complex assembly (ortholog); brain development (ortholog); central nervous system myelination (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hydrocephalus (ortholog); Kartagener syndrome (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955420 9689076 9727806 - 102017987 AGCD01020761;GBBH01164498;XM_005383062 XP_005383119 MODEL 9017453 protein-coding Atp6v0d1 ATPase H+ transporting V0 subunit d1 ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); protein-containing complex binding (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); lipodystrophy (ortholog); lung cancer (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); centrosome (ortholog) NW_004955484 9167439 9206193 + 102030532 AGCD01058412;GBDF01047324;XM_005403648 XP_005403705 MODEL 8774162 protein-coding Endog endonuclease G ENCODES a protein that exhibits DNA endonuclease activity (ortholog); DNA nuclease activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog); perikaryon (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955570 1200461 1203566 + 102025406 AGCD01074798;AGCD01074799;GBBH01228917;XM_005413641 XP_005413698 MODEL 9063930 protein-coding Apobr apolipoprotein B receptor ENCODES a protein that exhibits apolipoprotein receptor activity (ortholog); lipoprotein particle receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN foam cell differentiation (ortholog); triglyceride metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955493 6707917 6712108 + 102017350 AGCD01061131;GBDK01316922;XM_005405171 XP_005405228 MODEL 8889286 protein-coding Fbxw11 F-box and WD repeat domain containing 11 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of non-canonical NF-kappaB signal transduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of circadian rhythm (ortholog); PARTICIPATES IN Hedgehog signaling pathway; mTOR signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH asthma (ortholog); brachydactyly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 24703477 24834522 - 102023436 AGCD01008621;AGCD01008622;AGCD01008623;AGCD01008624;AGCD01008625;GBDF01162905;XM_005376332;XM_013509313;XM_013509316 XP_005376389;XP_013364767;XP_013364770 MODEL 8953426 protein-coding Ift140 intraflagellar transport 140 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH anterior segment dysgenesis 3 (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955442 15625429 15719006 + 102004648 AGCD01037877;AGCD01037878;GBDJ01108332;XM_005391568;XM_013517666;XM_013517667;XM_013517668 XP_005391625;XP_013373120;XP_013373121;XP_013373122 MODEL 8942984 ncrna LOC102011178 uncharacterized LOC102011178 NW_004955457 13088413 13091964 + 102011178 AGCD01047037;GBBH01088650;XR_262949 MODEL 9008490 protein-coding Aldoc aldolase, fructose-bisphosphate C ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fructose-bisphosphate aldolase activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); epithelial cell differentiation (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); ASSOCIATED WITH autoimmune disease of the nervous system (ortholog); borna disease (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); postsynaptic cytosol (ortholog) NW_004955481 4576913 4580999 + 102030193 AGCD01056944;GBDI01055607;XM_005402747 XP_005402804 MODEL 8899858 pseudo LOC102006665 10 kDa heat shock protein, mitochondrial pseudogene NW_004955482 8898964 8899780 - 102006665 AGCD01057555 MODEL 39134056 misc_rna 7SK 7SK RNA 8974430 protein-coding Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 ENCODES a protein that exhibits eukaryotic translation initiation factor 2alpha kinase activity (ortholog); heme binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); HRI-mediated signaling (ortholog); integrated stress response signaling (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955460 13723674 13754545 + 102024314 AGCD01048720;AGCD01048721;AGCD01048722;GBBH01142818;XM_005397898;XM_005397899 XP_005397955;XP_005397956 MODEL 8796980 protein-coding Ebf1 EBF transcription factor 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); cervical cancer (ortholog); disease of cellular proliferation (ortholog); FOUND IN nucleus (ortholog) NW_004955408 12735893 13121700 - 102019670 AGCD01008343;AGCD01008344;AGCD01008345;AGCD01008346;GBCB01111862;GBCQ01031704;XM_013508845 XP_013364299 MODEL 8723979 protein-coding Afg2a AAA ATPase AFG2A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); preribosome binding (ortholog); INVOLVED IN brain development (ortholog); DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); astigmatism (ortholog); FOUND IN ATPase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955428 17525388 17823478 - 102010822 AGCD01028044;AGCD01028045;AGCD01028046;AGCD01028047;AGCD01028048;AGCD01028049;AGCD01028050;AGCD01028051;AGCD01028052;GBDF01224056;XM_005386754;XM_005386755 XP_005386811;XP_005386812 MODEL 39132047 rrna 5S_rRNA 5S ribosomal RNA 8779027 protein-coding LOC102004541 aldehyde oxidase 4 NW_004955403 694922 799923 - 102004541 AGCD01001705;AGCD01001706;AGCD01001707;AGCD01001708;GBBH01002989;XM_005373240;XM_005373242;XM_013511853;XM_013511857 XP_005373297;XP_005373299;XP_013367307;XP_013367311 MODEL 8845227 protein-coding Trip11 thyroid hormone receptor interactor 11 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); chondrocyte differentiation involved in endochondral bone morphogenesis (ortholog); ASSOCIATED WITH achondrogenesis type IA (ortholog); acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); FOUND IN acrosomal membrane (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955438 14327400 14394022 - 102022016 AGCD01035343;AGCD01035344;AGCD01035345;GBDK01231119;XM_013517219 XP_013372673 MODEL 8885525 protein-coding LOC102009273 tripartite motif-containing protein 34 NW_004955414 21592178 21600802 + 102009273 AGCD01015423;AGCD01015424;GBDI01215595;XM_005380097;XM_005380098;XM_013512000;XM_013512001 XP_005380154;XP_005380155;XP_013367454;XP_013367455 MODEL 9039003 ncrna LOC102011589 uncharacterized LOC102011589 NW_004955540 3450472 3456881 - 102011589 AGCD01071339;GBDF01209410;XR_001232117;XR_001232118;XR_264829 MODEL 8757645 protein-coding Cgref1 cell growth regulator with EF-hand domain 1 INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Liver Neoplasms (ortholog) NW_004955469 9072333 9086427 - 102019381 AGCD01052489;GBCE01148200;XM_005400451;XM_005400452 XP_005400508;XP_005400509 MODEL 9023985 pseudo LOC102007040 olfactory receptor 13A1-like NW_004955507 6432557 6457489 + 102007040 AGCD01065716;AGCD01065717 MODEL 8787087 protein-coding LOC102010401 carboxylesterase 1D-like NW_004955433 13332713 13350578 - 102010401 AGCD01031684;AGCD01031685;XM_013516104 XP_013371558 MODEL 8721704 ncrna LOC102005589 uncharacterized LOC102005589 NW_004955415 23433810 23434272 + 102005589 AGCD01016554;GBDF01207363;XR_260313 MODEL 8970252 ncrna LOC102012807 uncharacterized LOC102012807 NW_004955442 3947192 3955740 - 102012807 AGCD01037517;GBBH01153642;XR_262112 MODEL 8707975 protein-coding Casq1 calsequestrin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); positive regulation of release of sequestered calcium ion into cytosol (ortholog); positive regulation of store-operated calcium channel activity (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); I band (ortholog); junctional sarcoplasmic reticulum membrane (ortholog) NW_004955468 11967678 11978836 + 102014657 AGCD01052140;GBDF01026889;XM_005400195 XP_005400252 MODEL 8803771 protein-coding Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); high voltage-gated calcium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to amyloid-beta (ortholog); protein targeting to membrane (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); congenital muscular dystrophy-dystroglycanopathy type A12 (ortholog); lung cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) NW_004955451 14041848 14059740 - 102023219 AGCD01043525;AGCD01043526;AGCD01043527;GBCE01131655;XM_005394294;XM_005394295;XM_005394296;XM_005394298 XP_005394351;XP_005394352;XP_005394353;XP_005394355 MODEL 10120789 pseudo LOC106149939 small nuclear ribonucleoprotein E-like NW_004955458 975486 975893 - 106149939 AGCD01047160 MODEL 8716337 pseudo LOC102017682 deoxynucleotidyltransferase terminal-interacting protein 2 pseudogene NW_004955498 2146251 2152131 + 102017682 AGCD01062766;AGCD01062767 MODEL 8853927 protein-coding Clstn2 calsyntenin 2 INVOLVED IN associative learning (ortholog); inhibitory synapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); glutamatergic synapse (ortholog) NW_004955508 5069872 5656621 - 102023383 AGCD01065898;AGCD01065899;AGCD01065900;AGCD01065901;AGCD01065902;AGCD01065903;GBDI01035836;XM_005407778;XM_005407779 XP_005407835;XP_005407836 MODEL 8745840 protein-coding Alg1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase ENCODES a protein that exhibits chitobiosyldiphosphodolichol beta-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); aphasia (ortholog) NW_004955442 12476055 12487613 - 102026266 AGCD01037736;GBDI01223383;XM_005391248;XM_005391249 XP_005391305;XP_005391306 MODEL 9038836 protein-coding LOC102004169 cell cycle control protein 50A NW_004955488 8014892 8049217 - 102004169 AGCD01059700;GBCB01006663;XM_013504427 XP_013359881 MODEL 8911053 ncrna LOC102003836 uncharacterized LOC102003836 NW_004955407 41449979 41453452 + 102003836 AGCD01007866;XR_259639 MODEL 8736914 protein-coding Diaph2 diaphanous related formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); axon midline choice point recognition (ortholog); ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955503 2324934 3132466 + 102018747 AGCD01064606;AGCD01064607;AGCD01064608;AGCD01064609;AGCD01064610;AGCD01064611;AGCD01064612;AGCD01064613;AGCD01064614;AGCD01064615;AGCD01064616;AGCD01064617;AGCD01064618;GBDI01105959;XM_013505853;XM_013505854 XP_013361307;XP_013361308 MODEL 39133922 misc_rna 7SK 7SK RNA 8708601 protein-coding Jade2 jade family PHD finger 2 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K16 acetyltransferase activity (ortholog); INVOLVED IN neuron projection extension (ortholog); positive regulation of neurogenesis (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog); Prostatic Neoplasms (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955408 5676590 5722726 + 102017198 AGCD01008148;AGCD01008149;AGCD01008150;GBCQ01121630;XM_005376152;XM_005376153;XM_005376155;XM_005376156;XM_005376157 XP_005376209;XP_005376210;XP_005376212;XP_005376213;XP_005376214 MODEL 9002231 protein-coding Il4r interleukin 4 receptor ENCODES a protein that exhibits interleukin-13 receptor activity (ortholog); interleukin-4 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); defense response to protozoan (ortholog); immunoglobulin mediated immune response (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); allergic conjunctivitis (ortholog); FOUND IN extracellular region (ortholog); interleukin-13 receptor complex (ortholog); interleukin-4 receptor complex (ortholog) NW_004955493 5546340 5580745 + 102006675 AGCD01061070;AGCD01061071;GBDJ01082206;XM_005405137 XP_005405194 MODEL 8873610 protein-coding LOC102008171 exonuclease 3'-5' domain-containing protein 1-like NW_004956095 1189 6900 - 102008171 AGCD01079041;AGCD01079042;AGCD01079043;GBDJ01296153;GBDK01051647;XM_005415168 XP_005415225 MODEL 8981421 protein-coding Cct5 chaperonin containing TCP1 subunit 5 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); beta-tubulin binding (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal recessive sensory neuropathy with spastic paraplegia (ortholog); Breast Neoplasms (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) NW_004955426 132106 144251 + 102030333 AGCD01025996;GBDF01003289;XM_005386112 XP_005386169 MODEL 9011073 protein-coding Gramd4 GRAM domain containing 4 INVOLVED IN negative regulation of toll-like receptor 9 signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) NW_004955413 30603820 30656940 + 102012850 AGCD01014612;GBBH01207818;XM_005379513;XM_005379514 XP_005379570;XP_005379571 MODEL 8824622 pseudo LOC102009644 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955516 2584233 2584809 - 102009644 AGCD01067462 MODEL 8723936 protein-coding Ankrd33b ankyrin repeat domain 33B ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955426 363297 383013 + 102004090 AGCD01026001;GBDI01359209;XM_005386256 XP_005386313 MODEL 39131860 rrna 5S_rRNA 5S ribosomal RNA 9010735 protein-coding Apoc1 apolipoprotein C1 ENCODES a protein that exhibits fatty acid binding (ortholog); lipase inhibitor activity (ortholog); phospholipase inhibitor activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); chylomicron remnant clearance (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cholangiocarcinoma (ortholog); congestive heart failure (ortholog); FOUND IN endoplasmic reticulum (ortholog); high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) NW_004955555 2005962 2007239 + 102028343 AGCD01073121;GBCB01060655;GBDI01216453;XM_005412478 XP_005412535 MODEL 8956268 protein-coding Erich6b glutamate rich 6B ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955518 3279721 3333159 - 102028567 AGCD01067798;AGCD01067799;GBDF01120562;XM_013506952 XP_013362406 MODEL 8878434 protein-coding Gdi2 GDP dissociation inhibitor 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); Rab GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); negative regulation of protein localization to cilium (ortholog); small GTPase-mediated signal transduction (ortholog); PARTICIPATES IN Rab family mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Down syndrome (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); synapse (ortholog) NW_004955421 22449620 22480721 - 102026648 AGCD01022136;AGCD01022137;GBBH01032868;GBDF01002947;XM_005383848;XM_005383849;XM_013513666 XP_005383905;XP_005383906;XP_013369120 MODEL 9030715 protein-coding Lin7a lin-7 cell polarity scaffold A ENCODES a protein that exhibits L27 domain binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN inner ear development (ortholog); neurotransmitter secretion (ortholog); synaptic vesicle transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); synapse (ortholog) NW_004955405 19403002 19548716 - 102023106 AGCD01005035;AGCD01005036;AGCD01005037;AGCD01005038;GBDJ01263209;XM_005374368;XM_005374369;XM_005374370;XM_013517946 XP_005374425;XP_005374426;XP_005374427;XP_013373400 MODEL 39133770 misc_rna 7SK 7SK RNA 8929571 protein-coding Endou endonuclease, poly(U) specific ENCODES a protein that exhibits RNA binding (ortholog); RNA endonuclease activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN female pregnancy (ortholog); negative regulation of lipid catabolic process (ortholog); post-transcriptional gene silencing (ortholog); FOUND IN cytoplasm (ortholog) NW_004955500 6631749 6653457 - 102017475 AGCD01063888;AGCD01063889;GBDI01340378;XM_005406609;XM_013505657;XM_013505658;XM_013505660 XP_005406666;XP_013361111;XP_013361112;XP_013361114 MODEL 39134359 misc_rna 7SK 7SK RNA 9042158 protein-coding Btbd3 BTB domain containing 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cerebral cortex development (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955415 21588669 21602990 + 102027294 AGCD01016513;GBDF01221665;XM_005380880;XM_005380882;XM_013512365 XP_005380937;XP_005380939;XP_013367819 MODEL 9005862 protein-coding Col25a1 collagen type XXV alpha 1 chain ENCODES a protein that exhibits amyloid-beta binding (ortholog); heparin binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis involved in innervation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955496 839474 1255107 + 102027758 AGCD01062244;AGCD01062245;AGCD01062246;AGCD01062247;AGCD01062248;AGCD01062249;AGCD01062250;AGCD01062251;GBCE01025822;XM_013505431;XM_013505432;XM_013505433;XM_013505434;XM_013505435;XM_013505436;XM_013505437;XM_013505438 XP_013360885;XP_013360886;XP_013360887;XP_013360888;XP_013360889;XP_013360890;XP_013360891;XP_013360892 MODEL 8861163 pseudo LOC102021775 cell division cycle 5-like protein NW_004955493 8532315 8537845 + 102021775 AGCD01061309 MODEL 8900526 protein-coding Cdh15 cadherin 15 ASSOCIATED WITH autosomal dominant intellectual developmental disorder 3 (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN caveola (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) NW_004955541 2881374 2893885 + 102027788 AGCD01071429;AGCD01071430;GBCB01109170;GBCQ01072076;XM_013507987 XP_013363441 MODEL 39132048 rrna 5S_rRNA 5S ribosomal RNA 8758065 protein-coding Diaph3 diaphanous related formin 3 ENCODES a protein that exhibits actin binding (ortholog); cytoskeletal protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Auditory Neuropathy (ortholog); autosomal dominant auditory neuropathy 1 (ortholog); FOUND IN actin filament bundle (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955404 44653308 45106943 + 102005884 AGCD01004425;AGCD01004426;AGCD01004427;AGCD01004428;AGCD01004429;AGCD01004430;AGCD01004431;AGCD01004432;AGCD01004433;AGCD01004434;AGCD01004435;AGCD01004436;AGCD01004437;GBDF01248888;XM_005374208 XP_005374265 MODEL 8997650 protein-coding Cep104 centrosomal protein 104 ENCODES a protein that exhibits glutamate binding (ortholog); glycine binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 77 (ortholog); FOUND IN centriole (ortholog); cilium (ortholog) NW_004955486 7849921 7877598 + 102024237 AGCD01059138;AGCD01059139;GBDF01120028;XM_005404138;XM_005404139;XM_013504197 XP_005404195;XP_005404196;XP_013359651 MODEL 8820151 protein-coding Cgrrf1 cell growth regulator with ring finger domain 1 INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleoplasm (ortholog) NW_004955409 8939793 8966351 - 102003736 AGCD01009426;GBDJ01421140;XM_005376766;XM_005376767 XP_005376823;XP_005376824 MODEL 8902207 protein-coding Atp6v0d2 ATPase H+ transporting V0 subunit d2 ASSOCIATED WITH cervical cancer (ortholog); ovarian cyst (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955417 3778587 3832973 + 102005253 AGCD01017925;AGCD01017926;GBDF01042563;XM_013512849;XM_013512850;XM_013512851;XM_013512852 XP_013368303;XP_013368304;XP_013368305;XP_013368306 MODEL 8910008 protein-coding Hspa12a heat shock protein family A (Hsp70) member 12A INVOLVED IN import into nucleus (ortholog); inflammatory response (ortholog); liver development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955431 21464578 21625979 - 102025937 AGCD01030496;GBBH01046958;XM_005387861;XM_005387862;XM_005387863;XM_005387864;XM_005387865;XM_013515841;XM_013515842 XP_005387918;XP_005387919;XP_005387920;XP_005387921;XP_005387922;XP_013371295;XP_013371296 MODEL 8811883 ncrna LOC102005590 uncharacterized LOC102005590 NW_004955479 2051181 2061238 - 102005590 AGCD01056261;GBDF01038985;XR_001230885;XR_001230886 MODEL 8972470 protein-coding Kcnj5 potassium inwardly rectifying channel subfamily J member 5 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization (ortholog); INVOLVED IN membrane repolarization during atrial cardiac muscle cell action potential (ortholog); potassium ion import across plasma membrane (ortholog); regulation of heart rate by cardiac conduction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH adenoma (ortholog); atrial fibrillation (ortholog); familial hyperaldosteronism III (ortholog); FOUND IN external side of plasma membrane (ortholog); inward rectifier potassium channel complex (ortholog); membrane (ortholog) NW_004955412 29850097 29874213 + 102015392 AGCD01013287;GBCQ01140795;XM_005378542;XM_005378543 XP_005378599;XP_005378600 MODEL 8900587 protein-coding LOC102008531 BRCA1-A complex subunit RAP80-like NW_004955417 1529837 1666641 - 102008531 AGCD01017837;AGCD01017838;AGCD01017839;AGCD01017840;AGCD01017841;AGCD01017842;AGCD01017843;AGCD01017844;XM_013512696 XP_013368150 MODEL 8829084 protein-coding Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 ENCODES a protein that exhibits actin filament binding (ortholog); calcium channel regulator activity (ortholog); high voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); chemical synaptic transmission (ortholog); membrane depolarization during atrial cardiac muscle cell action potential (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog); photoreceptor ribbon synapse (ortholog); voltage-gated calcium channel complex (ortholog) NW_004955429 9642725 9966175 - 102023505 AGCD01028652;AGCD01028653;AGCD01028654;AGCD01028655;AGCD01028656;AGCD01028657;AGCD01028658;AGCD01028659;AGCD01028660;GBCE01186840;GBCE01186846;XM_013515436;XM_013515437;XM_013515438 XP_013370890;XP_013370891;XP_013370892 MODEL 8915616 pseudo LOC102017683 fatty acid-binding protein, liver-like NW_004955424 757151 760005 + 102017683 AGCD01024207 MODEL 8904594 protein-coding Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); eukaryotic translation initiation factor 2alpha kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to amino acid starvation (ortholog); endoplasmic reticulum unfolded protein response (ortholog); PARTICIPATES IN ceramide signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955441 4908318 4944343 - 102011251 AGCD01036861;AGCD01036862;AGCD01036863;GBBH01062374;GBDJ01018096;XM_013517630 XP_013373084 MODEL 8797648 protein-coding Clstn3 calsyntenin 3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); enzyme inhibitor activity (ortholog); neurexin family protein binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); cold-induced thermogenesis (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 4690637 4719929 + 102012942 AGCD01013624;GBBH01006299;XM_005378860 XP_005378917 MODEL 8715284 pseudo LOC102004542 zinc finger protein 14-like NW_004955607 5112 93169 + 102004542 AGCD01076967;AGCD01076968;AGCD01076969;AGCD01076970;AGCD01076971;AGCD01076972;AGCD01076973;AGCD01076974;XM_005414908 MODEL 9059103 protein-coding Ift172 intraflagellar transport 172 ENCODES a protein that exhibits transcription factor binding (ortholog); INVOLVED IN bone development (ortholog); brain development (ortholog); cilium assembly (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle A (ortholog); intraciliary transport particle B (ortholog) NW_004955469 9418599 9455026 - 102004921 AGCD01052503;GBDJ01229225;XM_005400503;XM_013522663 XP_005400560;XP_013378117 MODEL 8779963 pseudo LOC102011593 tripartite motif-containing protein 44 pseudogene NW_004955441 5319595 5320576 + 102011593 AGCD01036876 MODEL 8751419 protein-coding Jade3 jade family PHD finger 3 INVOLVED IN regulation of cell cycle (ortholog); regulation of DNA biosynthetic process (ortholog); regulation of DNA replication (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955516 998854 1133013 - 102024837 AGCD01067408;AGCD01067409;AGCD01067410;AGCD01067411;AGCD01067412;AGCD01067413;GBDF01251303;XM_005408972 XP_005409029 MODEL 8728764 pseudo LOC102006671 nuclear FMR1 interacting protein 2-like NW_004955491 8637891 8639987 - 102006671 AGCD01060619 MODEL 8959830 ncrna LOC102007041 uncharacterized LOC102007041 NW_004955429 13140112 13203078 + 102007041 AGCD01028736;AGCD01028737;GBDF01304725;XR_261328 MODEL 8830249 protein-coding Fbxw2 F-box and WD repeat domain containing 2 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955419 7237472 7264482 + 102025797 AGCD01019875;AGCD01019876;GBDK01132156;XM_005382596;XM_013513235;XM_013513236 XP_005382653;XP_013368689;XP_013368690 MODEL 8701964 protein-coding Cimap2 ciliary microtubule associated protein 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955464 4571161 4589879 - 102025445 AGCD01049992;GBDF01122493;XM_005398511 XP_005398568 MODEL 8721724 protein-coding Grap GRB2 related adaptor protein INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 114 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955467 559411 581098 + 102006995 AGCD01051226;GBDI01132002;XM_005399286 XP_005399343 MODEL 8906143 protein-coding Cct6a chaperonin containing TCP1 subunit 6A ENCODES a protein that exhibits protein folding chaperone (ortholog); WD40-repeat domain binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of establishment of protein localization to telomere (ortholog); positive regulation of protein localization to Cajal body (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cell body (ortholog); chaperonin-containing T-complex (ortholog) NW_004955456 8223785 8236760 + 102029708 AGCD01046462;AGCD01046463;AGCD01046464;GBDK01011083;XM_005396698 XP_005396755 MODEL 8766898 pseudo LOC102010402 small integral membrane protein 15-like NW_004955434 9168651 9169463 + 102010402 AGCD01032291 MODEL 8779976 ncrna LOC102012811 uncharacterized LOC102012811 NW_004955559 2195047 2205058 - 102012811 AGCD01073700;AGCD01073701;GBBH01056100;XR_265004 MODEL 8798923 protein-coding Casq2 calsequestrin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sequestering activity (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to caffeine (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Bradycardia (ortholog); FOUND IN cytoplasm (ortholog); junctional membrane complex (ortholog); sarcoplasmic reticulum (ortholog) NW_004955435 18941975 18996027 - 102027564 AGCD01033415;AGCD01033416;AGCD01033417;GBCB01099901;XM_005389033 XP_005389090 MODEL 39134057 misc_rna 7SK 7SK RNA 8781812 protein-coding Apoc2 apolipoprotein C2 ENCODES a protein that exhibits identical protein binding (ortholog); lipase inhibitor activity (ortholog); lipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); chylomicron remnant clearance (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Coronary Disease (ortholog); diabetes mellitus (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); intermediate-density lipoprotein particle (ortholog) NW_004955555 2019547 2021543 + 102028689 AGCD01073125;GBCQ01062692;XM_005412482 XP_005412539 MODEL 10373515 protein-coding LOC106149941 uncharacterized LOC106149941 NW_004955458 3649750 3653101 - 106149941 AGCD01047331;AGCD01047332;XM_013520803 XP_013376257 MODEL 8945576 protein-coding LOC102004170 olfactory receptor 6B1 NW_004955491 349180 350455 + 102004170 AGCD01060331;GBBH01225832;XM_005404722 XP_005404779 MODEL 8921573 protein-coding Ebf2 EBF transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); cell fate determination (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955403 48674218 48859843 - 102025425 AGCD01002926;AGCD01002927;AGCD01002928;AGCD01002929;GBDI01106348;XM_005373722 XP_005373779 MODEL 8904930 pseudo LOC102003840 matrin-3 pseudogene NW_004955408 32750191 32754243 - 102003840 AGCD01008854 MODEL 39133923 misc_rna 7SK 7SK RNA 9055370 protein-coding Ccdc40 coiled-coil domain 40 molecular ruler complex subunit INVOLVED IN axonemal dynein complex assembly (ortholog); axoneme assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955506 2783837 2840248 - 102023827 AGCD01065301;GBCE01084843;XM_005407506;XM_013505994 XP_005407563;XP_013361448 MODEL 8848976 ncrna LOC102009277 uncharacterized LOC102009277 NW_004955474 12346167 12355317 - 102009277 AGCD01054658;GBDK01287845;XR_001230737;XR_001230738 MODEL 8766720 protein-coding Trip12 thyroid hormone receptor interactor 12 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); heterochromatin boundary formation (ortholog); protein polyubiquitination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955453 5132776 5272250 + 102029932 AGCD01044705;AGCD01044706;GBDF01007218;XM_005395422;XM_005395424;XM_005395425;XM_005395426;XM_005395427;XM_005395428;XM_005395429;XM_005395430;XM_013519820;XM_013519821;XM_013519822 XP_005395479;XP_005395481;XP_005395482;XP_005395483;XP_005395484;XP_005395485;XP_005395486;XP_005395487;XP_013375274;XP_013375275;XP_013375276 MODEL 9011050 pseudo LOC102011180 multifunctional protein ADE2-like NW_004955458 11807530 11818009 - 102011180 AGCD01047760 MODEL 8830009 protein-coding Col26a1 collagen type XXVI alpha 1 chain INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); Golgi apparatus (ortholog) NW_004955456 15803342 15951349 - 102014871 AGCD01046674;AGCD01046675;AGCD01046676;AGCD01046677;AGCD01046678;AGCD01046679;AGCD01046680;AGCD01046681;GBDJ01369254;XM_005396899 XP_005396956 MODEL 8729828 ncrna LOC102021779 uncharacterized LOC102021779 NW_004955495 5177777 5182165 + 102021779 AGCD01061979;AGCD01061980;GBDF01046728;XR_264151;XR_264152 MODEL 8881021 protein-coding LOC102008175 translation initiation factor IF-2-like NW_004955451 5786082 5786923 - 102008175 AGCD01043175;GBCQ01165193;GBDJ01098516;XM_013519403 XP_013374857 MODEL 8816539 pseudo LOC102009646 60S ribosomal protein L39 pseudogene NW_004955520 1114140 1114853 + 102009646 AGCD01068043;XM_005409228 MODEL 8699899 protein-coding Acads acyl-CoA dehydrogenase short chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN butyrate catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH absence epilepsy (ortholog); alcohol use disorder (ortholog); anxiety disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955455 10928560 10942748 - 102019142 AGCD01045967;AGCD01045968;GBBH01207722;GBDF01118831;XM_013520359 XP_013375813 MODEL 8725136 protein-coding Ankrd34a ankyrin repeat domain 34A ASSOCIATED WITH Breast Neoplasms (ortholog); lymphoma (ortholog); FOUND IN cytosol (ortholog) NW_004955568 130062 134841 + 102029568 AGCD01074503;GBCB01063737;XM_005413420;XM_005413421 XP_005413477;XP_005413478 MODEL 8815373 protein-coding Jag1 jagged canonical Notch ligand 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); Notch binding (ortholog); phospholipid binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); animal organ regeneration (ortholog); aorta morphogenesis (ortholog); PARTICIPATES IN Alagille syndrome pathway; altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alagille syndrome (ortholog); ALAGILLE SYNDROME 1 (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955415 20490414 20526068 - 102026214 AGCD01016489;GBDI01297353;GBDJ01141831;XM_005380879 XP_005380936 MODEL 9055775 protein-coding Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atypical hemolytic-uremic syndrome (ortholog); autoimmune thrombocytopenic purpura (ortholog); FOUND IN extracellular region (ortholog) NW_004955513 2761386 2786447 + 102017596 AGCD01066889;AGCD01066890;GBCQ01185243;XM_013506558;XM_013506559;XM_013506560;XM_013506561 XP_013362012;XP_013362013;XP_013362014;XP_013362015 MODEL 8904424 protein-coding Erlec1 endoplasmic reticulum lectin 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); endoplasmic reticulum quality control compartment (ortholog); Hrd1p ubiquitin ligase complex (ortholog) NW_004955441 19535425 19557960 + 102003697 AGCD01037349;AGCD01037350;AGCD01037351;AGCD01037352;GBBH01065712;GBDJ01003705;XM_013517526 XP_013372980 MODEL 39133773 misc_rna 7SK 7SK RNA 8744389 protein-coding Gdnf glial cell derived neurotrophic factor ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor binding (ortholog); growth factor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to dexamethasone stimulus (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); signaling receptor complex (ortholog) NW_004955426 22386613 22412324 - 102017258 AGCD01026616;GBDJ01107563;XM_005386218;XM_005386219;XM_005386220;XM_005386221;XM_005386222;XM_005386223;XM_013514924 XP_005386275;XP_005386276;XP_005386277;XP_005386278;XP_005386279;XP_005386280;XP_013370378 MODEL 8825322 protein-coding Alg10 ALG10 alpha-1,2-glucosyltransferase INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Il (ortholog); developmental and epileptic encephalopathy 36 (ortholog); long QT syndrome 2 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955505 1844005 1854229 - 102004837 AGCD01064978;GBDJ01260417;XM_005407110 XP_005407167 MODEL 39134360 misc_rna 7SK 7SK RNA 8731210 protein-coding Afg2b AAA ATPase AFG2B ENCODES a protein that exhibits identical protein binding (ortholog); preribosome binding (ortholog); INVOLVED IN DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); astigmatism (ortholog); autosomal recessive nonsyndromic deafness 119 (ortholog); FOUND IN ATPase complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955409 8031094 8049477 - 102025769 AGCD01009375;AGCD01009376;AGCD01009377;GBBH01209720;GBCQ01066797;XM_005377148 XP_005377205 MODEL 8700199 protein-coding Clta clathrin light chain A ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN clathrin coat (ortholog); clathrin complex (ortholog); clathrin-coated pit (ortholog) NW_004955472 96958 117230 - 102029957 AGCD01053314;AGCD01053315;GBBH01000318;GBDI01022015;XM_013522981 XP_013378435 MODEL 39131473 protein-coding CH25H cholesterol 25-hydroxylase 8860734 pseudo LOC102009279 60S ribosomal protein L34 pseudogene NW_004955477 5072715 5073707 + 102009279 AGCD01055590 MODEL 8755326 protein-coding Hspa12b heat shock protein family A (Hsp70) member 12B INVOLVED IN angiogenesis (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955415 14576956 14596135 + 102028958 AGCD01016300;GBDK01083773;XM_005380798;XM_005380799;XM_005380800 XP_005380855;XP_005380856;XP_005380857 MODEL 8786730 protein-coding Cimap3 ciliary microtubule associated protein 3 ENCODES a protein that exhibits beta-tubulin binding (ortholog); gamma-tubulin binding (ortholog); kinesin binding (ortholog); INVOLVED IN cilium organization (ortholog); embryonic heart tube left/right pattern formation (ortholog); positive regulation of kinase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955435 14888554 14898274 + 102025720 AGCD01033256;AGCD01033257;GBDF01000208;XM_005388944;XM_005388945;XM_005388946;XM_005388947 XP_005389001;XP_005389002;XP_005389003;XP_005389004 MODEL 9009387 protein-coding LOC102005594 olfactory receptor 1L6-like NW_004955419 5236631 5237566 - 102005594 AGCD01019793;XM_005382523 XP_005382580 MODEL 8852633 ncrna LOC102010405 uncharacterized LOC102010405 NW_004955436 1481983 1512078 + 102010405 AGCD01033577;AGCD01033578;AGCD01033579;GBDF01153927;XR_001234957;XR_001234958;XR_001234959;XR_001234960;XR_001234961;XR_001234962;XR_001234963;XR_001234964 MODEL 9058032 protein-coding Kcnj6 potassium inwardly rectifying channel subfamily J member 6 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); G-protein alpha-subunit binding (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to morphine (ortholog); response to electrical stimulus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Down syndrome (ortholog); heroin dependence (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955407 36670824 36923960 - 102017538 AGCD01007773;AGCD01007774;AGCD01007775;AGCD01007776;XM_005375756 XP_005375813 MODEL 8757531 protein-coding Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); eukaryotic translation initiation factor 2alpha kinase activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Chronic Hepatitis B (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 210867 279267 + 102016725 AGCD01024168;AGCD01024169;AGCD01024170;GBBH01143001;GBBH01143002;XM_013514710 XP_013370164 MODEL 8801468 protein-coding Apoc3 apolipoprotein C3 ENCODES a protein that exhibits high-density lipoprotein particle receptor binding (ortholog); lipase inhibitor activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH apolipoprotein C-III deficiency (ortholog); breast cancer (ortholog); cardiovascular system disease (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); intermediate-density lipoprotein particle (ortholog) NW_004955412 18165667 18168015 + 102021864 AGCD01012927;GBCQ01006025;XM_005378187 XP_005378244 MODEL 8813644 protein-coding LOC102017684 complement C1q-like protein 4 NW_004955500 8138111 8141865 - 102017684 AGCD01063981;GBDI01140203;XM_005415350 XP_005415407 MODEL 9060620 protein-coding Btbd6 BTB domain containing 6 NW_004955538 3494950 3496888 + 102005179 AGCD01071166;GBBH01033922;GBCE01001883;XM_005410859 XP_005410916 MODEL 8915793 protein-coding Cdh16 cadherin 16 INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); thyroid cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955433 23413904 23423324 - 102025500 AGCD01031960;GBCQ01109409;XM_005388482;XM_005388483;XM_013516092;XM_013516093 XP_005388539;XP_005388540;XP_013371546;XP_013371547 MODEL 39132050 rrna 5S_rRNA 5S ribosomal RNA 39131861 rrna 5S_rRNA 5S ribosomal RNA 39133924 misc_rna 7SK 7SK RNA 8814121 protein-coding LOC102004544 histone H3-like NW_004955403 18749690 18755615 - 102004544 AGCD01002110;GBDI01222345;XM_005373397 XP_005373454 MODEL 8813481 ncrna LOC102011190 uncharacterized LOC102011190 NW_004955413 27903491 27912153 + 102011190 AGCD01014537;GBDI01285497;XR_260120 MODEL 8870419 ncrna LOC102011598 uncharacterized LOC102011598 NW_004955567 1211454 1212041 + 102011598 AGCD01074462;GBDF01038351;XR_265029 MODEL 8858507 protein-coding Ift20 intraflagellar transport 20 ENCODES a protein that exhibits opsin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); centrosome localization (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955481 4799548 4807751 + 102007225 AGCD01056953;GBDF01089063;XM_005402762;XM_005402763;XM_005402764;XM_005402766;XM_005402767 XP_005402819;XP_005402820;XP_005402821;XP_005402823;XP_005402824 MODEL 8850929 protein-coding Dicer1 dicer 1, ribonuclease III ENCODES a protein that exhibits double-stranded RNA binding (ortholog); miRNA binding (ortholog); pre-miRNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cardiac muscle cell development (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH adult cystic nephroma (ortholog); anxiety disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955438 17374899 17431599 + 102018859 AGCD01035441;GBCQ01012900;XM_013517206 XP_013372660 MODEL 8842626 protein-coding Lin7b lin-7 cell polarity scaffold B ENCODES a protein that exhibits PDZ domain binding (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN neurotransmitter secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell-cell junction (ortholog); plasma membrane (ortholog) NW_004955559 1610924 1613736 - 102020061 AGCD01073653;GBCB01002101;XM_013509002;XM_013509003 XP_013364456;XP_013364457 MODEL 9054396 protein-coding Fbxw4 F-box and WD repeat domain containing 4 INVOLVED IN cartilage development (ortholog); embryonic digit morphogenesis (ortholog); limb development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955485 8584836 8688416 + 102017667 AGCD01058723;AGCD01058724;GBBH01142165;GBCB01024724;XM_005403932;XM_013504092;XM_013504093;XM_013504094;XM_013504095;XM_013504096;XM_013504097;XM_013504098;XM_013504100;XR_001231089 XP_005403989;XP_013359546;XP_013359547;XP_013359548;XP_013359549;XP_013359550;XP_013359551;XP_013359552;XP_013359554 MODEL 9033798 ncrna LOC102009650 uncharacterized LOC102009650 NW_004955537 1976715 1992245 - 102009650 AGCD01070909;GBDJ01200201;XR_001232066;XR_001232067;XR_001232068;XR_264772 MODEL 8797137 protein-coding Endov endonuclease V ENCODES a protein that exhibits DNA binding (ortholog); DNA endonuclease activity, producing 5'-phosphomonoesters (ortholog); magnesium ion binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleolus (ortholog) NW_004955506 2483409 2495484 - 102023504 AGCD01065296;GBCE01094306;XM_013506016;XM_013506017 XP_013361470;XP_013361471 MODEL 9007174 protein-coding Ankrd34b ankyrin repeat domain 34B ASSOCIATED WITH lung cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955418 29312312 29322572 + 102015011 AGCD01019457;XM_005382317;XM_013513049;XM_013513050 XP_005382374;XP_013368503;XP_013368504 MODEL 8752072 protein-coding Atp6v0e1 ATPase H+ transporting V0 subunit e1 ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); response to amino acid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN proton-transporting V-type ATPase complex (ortholog) NW_004955408 25667703 25703550 + 102028164 AGCD01008649;AGCD01008650;AGCD01008651;GBBH01001756;XM_005376345 XP_005376402 MODEL 8879374 protein-coding LOC102006674 ATP-binding cassette sub-family A member 3-like NW_004955493 488799 638781 + 102006674 AGCD01060854;AGCD01060855;AGCD01060856;AGCD01060857;AGCD01060858;GBDF01290732;XM_005405051;XM_005405052;XM_013504904;XM_013504905;XM_013504906;XM_013504907;XM_013504908 XP_005405108;XP_005405109;XP_013360358;XP_013360359;XP_013360360;XP_013360361;XP_013360362 MODEL 8902892 ncrna LOC102012812 uncharacterized LOC102012812 NW_004955446 2324596 2337167 - 102012812 AGCD01039981;GBDF01040343;XR_001235685 MODEL 9024737 protein-coding LOC102008533 cytochrome c oxidase subunit 7C, mitochondrial ASSOCIATED WITH Alzheimer's disease (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955418 24413883 24416530 - 102008533 AGCD01019331;GBCE01002366;XM_005382301 XP_005382358 MODEL 39134058 misc_rna 7SK 7SK RNA 8803342 protein-coding Il5 interleukin 5 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-5 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-4 signaling pathway; interleukin-5 signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); allergic asthma (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 3937128 3951784 - 102029937 AGCD01008083;GBDK01154528;XM_005376103;XR_001231944 XP_005376160 MODEL 8935194 protein-coding Casr calcium sensing receptor ENCODES a protein that exhibits amino acid binding (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); bile acid secretion (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; E-cadherin signaling pathway; G protein mediated signaling pathway via Galpha12/Galpha13 family; ASSOCIATED WITH Albuminuria (ortholog); atherosclerosis (ortholog); autosomal dominant hypocalcemia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955427 21486608 21574017 + 102008556 AGCD01027445;AGCD01027446;AGCD01027447;AGCD01027448;AGCD01027449;AGCD01027450;GBDI01089889;XM_005386506;XM_013515042 XP_005386563;XP_013370496 MODEL 10177620 pseudo LOC106149942 uncharacterized LOC106149942 NW_004955458 4475421 4533274 - 106149942 AGCD01047416;AGCD01047417;AGCD01047418 MODEL 8881843 protein-coding Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); protein kinase binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); Nerve Injuries (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); L-type voltage-gated calcium channel complex (ortholog) NW_004955500 7676331 7685174 + 102007251 AGCD01063940;GBCE01031695;GBCQ01113306;XM_005406665 XP_005406722 MODEL 8786543 protein-coding Ebf3 EBF transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); absence epilepsy (ortholog); acute myeloid leukemia (ortholog); FOUND IN nucleus (ortholog) NW_004955477 7435324 7557212 - 102018724 AGCD01055613;AGCD01055614;GBCE01181834;XM_013503101;XM_013503102;XM_013503103;XM_013503104;XM_013503105;XM_013503106;XM_013503107;XM_013503108;XM_013503109;XM_013503110 XP_013358555;XP_013358556;XP_013358557;XP_013358558;XP_013358559;XP_013358560;XP_013358561;XP_013358562;XP_013358563;XP_013358564 MODEL 39134361 misc_rna 7SK 7SK RNA 8709213 ncrna LOC102008177 uncharacterized LOC102008177 NW_004955404 49258791 49264921 - 102008177 AGCD01004518;GBCQ01074933;XR_259344 MODEL 8702202 protein-coding Cep112 centrosomal protein 112 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN gene expression (ortholog); receptor localization to synapse (ortholog); regulation of translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955478 5065925 5583624 - 102005929 AGCD01055864;AGCD01055865;AGCD01055866;AGCD01055867;AGCD01055868;AGCD01055869;AGCD01055870;AGCD01055871;AGCD01055872;AGCD01055873;AGCD01055874;AGCD01055875;AGCD01055876;AGCD01055877;AGCD01055878;AGCD01055879;GBDK01264291;XM_005402139;XM_005402140;XM_005402141;XM_005402146;XM_013503230;XM_013503231 XP_005402196;XP_005402197;XP_005402198;XP_005402203;XP_013358684;XP_013358685 MODEL 8889785 protein-coding Afg3l2 AFG3 like matrix AAA peptidase subunit 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN axonogenesis (ortholog); calcium import into the mitochondrion (ortholog); cellular response to glutathione (ortholog); ASSOCIATED WITH Apnea (ortholog); Arthralgia (ortholog); atrial heart septal defect (ortholog); FOUND IN m-AAA complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955402 1037414 1069165 + 102012484 AGCD01000045;AGCD01000046;GBCE01137899;GBDF01126909;XM_013513870;XM_013513903 XP_013369324;XP_013369357 MODEL 9028411 protein-coding LOC102021781 tubulin alpha-1C chain-like NW_004955499 225128 255221 - 102021781 AGCD01063201;AGCD01063202;AGCD01063203;AGCD01063204;AGCD01063205;AGCD01063206;GBCQ01114400;XM_013505551 XP_013361005 MODEL 8998837 protein-coding Cltb clathrin light chain B ENCODES a protein that exhibits peptide binding (ortholog); INVOLVED IN synaptic vesicle endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN ciliary membrane (ortholog); clathrin coat (ortholog); plasma membrane (ortholog) NW_004955408 28692933 28717566 - 102010977 AGCD01008722;AGCD01008723;GBCC01027306;GBDF01051234;XM_005376376;XM_005376377 XP_005376433;XP_005376434 MODEL 8821648 protein-coding Acadsb acyl-CoA dehydrogenase short/branched chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); electron transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); fatty acid metabolic process (ortholog); L-isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 2-Methylbutyryl-CoA Dehydrogenase Deficiency (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955477 1177704 1213347 + 102025788 AGCD01055503;GBCB01041775;XM_005401957 XP_005402014 MODEL 8864723 protein-coding Cct6b chaperonin containing TCP1 subunit 6B ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Burkitt lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN chaperonin-containing T-complex (ortholog) NW_004955481 9624132 9694041 - 102007551 AGCD01057104;AGCD01057105;AGCD01057106;AGCD01057107;AGCD01057108;AGCD01057109;AGCD01057110;AGCD01057111;GBCQ01058116;XM_005402850;XM_013503402 XP_005402907;XP_013358856 MODEL 8842395 protein-coding LOC102009284 uncharacterized LOC102009284 NW_004955420 26735389 26736424 + 102009284 AGCD01021427;GBDF01043434;XM_005383475 XP_005383532 MODEL 8768877 ncrna LOC102004176 uncharacterized LOC102004176 NW_004955422 28216623 28220532 + 102004176 AGCD01023345;GBDF01261407;XR_260927 MODEL 8992702 protein-coding Erlin1 ER lipid raft associated 1 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); protein-containing complex (ortholog) NW_004955507 6029247 6062946 - 102020593 AGCD01065695;GBDF01082079;XM_005407685;XM_005407686 XP_005407742;XP_005407743 MODEL 8977474 protein-coding LOC102007042 olfactory receptor 5M9 NW_004955511 1599335 1600267 - 102007042 AGCD01066373;XM_005407967 XP_005408024 MODEL 8810376 protein-coding Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955451 3751229 3799651 - 102006861 AGCD01043071;AGCD01043072;GBBH01069797;GBDF01048584;XM_013519210 XP_013374664 MODEL 8996490 protein-coding Ccdc42 coiled-coil domain containing 42 INVOLVED IN acrosome assembly (ortholog); centrosome cycle (ortholog); cilium assembly (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); FOUND IN centrosome (ortholog); manchette (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955467 8207590 8220426 + 102013489 AGCD01051445;GBDJ01422457;XM_005399393 XP_005399450 MODEL 8727854 protein-coding Cdh17 cadherin 17 ENCODES a protein that exhibits integrin binding (ortholog); proton-dependent oligopeptide secondary active transmembrane transporter activity (ortholog); INVOLVED IN B cell differentiation (ortholog); calcium-dependent cell-cell adhesion (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955417 10370606 10441008 - 102023593 AGCD01018071;GBDK01077887;XM_005381802;XM_005381803;XM_005381804;XM_013512690 XP_005381859;XP_005381860;XP_005381861;XP_013368144 MODEL 9016609 protein-coding Col27a1 collagen type XXVII alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); INVOLVED IN extracellular matrix organization (ortholog); growth plate cartilage chondrocyte development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN fibrillar collagen trimer (ortholog) NW_004955419 13289006 13411118 - 102014453 AGCD01020000;AGCD01020001;AGCD01020002;GBCQ01151252;XM_005382644;XM_013513271 XP_005382701;XP_013368725 MODEL 8940649 protein-coding Trip13 thyroid hormone receptor interactor 13 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN double-strand break repair (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN male germ cell nucleus (ortholog) NW_004955504 434187 452636 + 102029767 AGCD01064819;GBDF01223456;XM_005407032 XP_005407089 MODEL 8701629 protein-coding Alg11 ALG11 alpha-1,2-mannosyltransferase ENCODES a protein that exhibits GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955431 5297477 5320653 + 102007144 AGCD01030019;GBDF01195619;XM_005387615;XM_005387616;XM_013515772;XM_013515773;XR_001234601 XP_005387672;XP_005387673;XP_013371226;XP_013371227 MODEL 8842927 protein-coding Grap2 GRB2 related adaptor protein 2 ASSOCIATED WITH Anaphylaxis (ortholog); hepatitis C (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome (ortholog) NW_004955413 25691824 25758461 + 102005694 AGCD01014412;GBDK01235103;XM_005379302;XM_005379304;XM_013511605;XM_013511606 XP_005379359;XP_005379361;XP_013367059;XP_013367060 MODEL 39132052 rrna 5S_rRNA 5S ribosomal RNA 8795245 protein-coding Cimip1 ciliary microtubule inner protein 1 ASSOCIATED WITH urinary bladder cancer (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cilium (ortholog) NW_004955445 1360659 1370748 - 102029132 AGCD01039338;GBBH01003777;XM_005392246 XP_005392303 MODEL 8963158 pseudo LOC102004548 60S ribosomal protein L32 pseudogene NW_004957060 748 1529 + 102004548 AGCD01080456 MODEL 39133793 misc_rna 7SK 7SK RNA 8987116 protein-coding Ch25h cholesterol 25-hydroxylase ENCODES a protein that exhibits cholesterol 25-hydroxylase activity (ortholog); steroid hydroxylase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); cholesterol metabolic process (ortholog); negative regulation of cholesterol metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955425 3763302 3764432 + 102018413 AGCD01025297;GBBH01026526;XM_005385856 XP_005385913 MODEL 8746502 protein-coding Dido1 death inducer-obliterator 1 INVOLVED IN apoptotic signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955528 1153181 1207346 + 102021701 AGCD01069552;AGCD01069553;GBDF01176165;XM_005410006;XM_005410007;XM_005410008;XM_005410010;XM_005410011;XM_013507449;XM_013507450 XP_005410063;XP_005410064;XP_005410065;XP_005410067;XP_005410068;XP_013362903;XP_013362904 MODEL 8713186 ncrna LOC102006677 uncharacterized LOC102006677 NW_004955422 22593229 22599979 + 102006677 AGCD01023163;GBDF01074983;XR_260905 MODEL 9046474 pseudo LOC102003842 protein CASC4 pseudogene NW_004955459 21261 22548 - 102003842 AGCD01047923 MODEL 8910607 protein-coding Atp6v0e2 ATPase H+ transporting V0 subunit e2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN synaptic vesicle membrane (ortholog) NW_004955491 4929405 4935247 + 102017780 AGCD01060465;GBDJ01237248;XM_005404765 XP_005404822 MODEL 39134059 misc_rna 7SK 7SK RNA 8769524 pseudo LOC102005595 26S proteasome non-ATPase regulatory subunit 8 pseudogene NW_004955419 11675117 11798906 - 102005595 AGCD01019960;AGCD01019961 MODEL 8746465 protein-coding LOC102017688 olfactory receptor 8K3-like NW_004955511 1324682 1325641 + 102017688 AGCD01066365;XM_005408230 XP_005408287 MODEL 8809845 protein-coding Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ENCODES a protein that exhibits eukaryotic translation initiation factor 2alpha kinase activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to cold (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955416 6897897 7005602 + 102013603 AGCD01016957;AGCD01016958;AGCD01016959;AGCD01016960;AGCD01016961;GBBH01172188;XM_005381212 XP_005381269 MODEL 8913596 protein-coding Kcnj8 potassium inwardly rectifying channel subfamily J member 8 ENCODES a protein that exhibits ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN action potential (ortholog); adaptive immune response (ortholog); apoptotic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 1 (ortholog); coronary artery disease (ortholog); FOUND IN glutamatergic synapse (ortholog); inward rectifying potassium channel (ortholog); myofibril (ortholog) NW_004955413 17364447 17371255 - 102019257 AGCD01014149;GBCE01075130;GBCQ01127914;XM_005379065 XP_005379122 MODEL 10254371 protein-coding Apoc4 apolipoprotein C4 INVOLVED IN lipid storage (ortholog); triglyceride homeostasis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) NW_004955555 2018327 2018828 + 106147404 AGCD01073125;GBCB01035189;XM_013508676 XP_013364130 MODEL 8989111 protein-coding Cass4 Cas scaffold protein family member 4 ENCODES a protein that exhibits protein tyrosine kinase binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of protein tyrosine kinase activity (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog) NW_004955445 2771130 2809815 - 102009663 AGCD01039365;AGCD01039366;AGCD01039367;GBDK01232305;XM_005392268 XP_005392325 MODEL 39131862 rrna 5S_rRNA 5S ribosomal RNA 39133925 misc_rna 7SK 7SK RNA 39134362 misc_rna 7SK 7SK RNA 8967426 ncrna LOC102011192 uncharacterized LOC102011192 NW_004955469 9744913 9758948 + 102011192 AGCD01052516;GBCB01088434;XR_263445 MODEL 8743135 protein-coding Ift22 intraflagellar transport 22 INVOLVED IN keratinocyte development (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); intraciliary transport particle A (ortholog) NW_004955456 15980412 15987573 + 102020763 AGCD01046681;GBDF01088462;XM_005396853;XM_005396854;XR_262912 XP_005396910;XP_005396911 MODEL 9062926 pseudo LOC102009651 synaptonemal complex protein 3-like NW_004955437 1319326 1320146 - 102009651 AGCD01034204 MODEL 9063866 protein-coding Cltc clathrin heavy chain ENCODES a protein that exhibits ankyrin binding (ortholog); clathrin light chain binding (ortholog); disordered domain specific binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; FasL mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); atrial heart septal defect (ortholog); FOUND IN clathrin coat (ortholog); clathrin complex (ortholog); clathrin-coated pit (ortholog) NW_004955451 3380304 3445973 - 102013895 AGCD01043053;AGCD01043054;GBDI01020316;XM_005393983;XM_005393984 XP_005394040;XP_005394041 MODEL 8718567 protein-coding Ankrd34c ankyrin repeat domain 34C ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955533 311863 320185 + 102014083 AGCD01070314;XM_005410382;XM_005410383 XP_005410439;XP_005410440 MODEL 8969235 protein-coding Hspa13 heat shock protein family A (Hsp70) member 13 ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog) NW_004955407 16195366 16205371 - 102006742 AGCD01007209;GBBH01032849;XM_005375564 XP_005375621 MODEL 8787400 protein-coding Eng endoglin ENCODES a protein that exhibits BMP binding (ortholog); coreceptor activity (ortholog); galactose binding (ortholog); INVOLVED IN angiogenesis (ortholog); artery morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); arteriovenous malformation (ortholog); FOUND IN cell surface (ortholog); endothelial microparticle (ortholog); external side of plasma membrane (ortholog) NW_004955419 818797 853319 + 102025796 AGCD01019613;AGCD01019614;AGCD01019615;AGCD01019616;AGCD01019617;GBCQ01003907;XM_013513164;XM_013513165;XM_013513166;XM_013513167 XP_013368618;XP_013368619;XP_013368620;XP_013368621 MODEL 8962076 protein-coding Lin7c lin-7 cell polarity scaffold C ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); L27 domain binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN morphogenesis of an epithelial sheet (ortholog); neurotransmitter secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955476 6650539 6658811 - 102016379 AGCD01055339;GBDF01088577;XM_005401750 XP_005401807 MODEL 8874515 pseudo LOC102010411 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955545 1844626 1846296 - 102010411 AGCD01071873 MODEL 8900618 protein-coding LOC102004177 olfactory receptor 4X2-like NW_004955422 274679 279123 - 102004177 AGCD01022402;GBCQ01019293;XM_005384933 XP_005384990 MODEL 9030472 protein-coding Erlin2 ER lipid raft associated 2 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane raft (ortholog) NW_004955463 13445468 13460370 + 102011633 AGCD01049867;GBBH01031754;XM_005398411;XM_013521497;XM_013521498 XP_005398468;XP_013376951;XP_013376952 MODEL 8760364 protein-coding Btbd7 BTB domain containing 7 INVOLVED IN regulation of branching involved in salivary gland morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955438 15345678 15445705 - 102004643 AGCD01035365;AGCD01035366;AGCD01035367;GBCB01121971;XM_005390344;XM_013517216;XM_013517217;XM_013517218 XP_005390401;XP_013372670;XP_013372671;XP_013372672 MODEL 8893588 protein-coding LOC102007043 olfactory receptor 5W2-like NW_004955511 691641 692573 - 102007043 AGCD01066337;XM_005408207 XP_005408264 MODEL 9018540 protein-coding Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); protein kinase binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Ataxia (ortholog); dilated cardiomyopathy (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear speck (ortholog); plasma membrane (ortholog) NW_004955440 17364996 17497446 - 102006612 AGCD01036569;AGCD01036570;AGCD01036571;AGCD01036572;AGCD01036573;AGCD01036574;AGCD01036575;GBDJ01171361;XM_005390810;XM_005390811 XP_005390867;XP_005390868 MODEL 39134060 misc_rna 7SK 7SK RNA 8809835 ncrna LOC102011599 uncharacterized LOC102011599 NW_004955448 16625313 16631092 + 102011599 AGCD01041700;GBDF01305679;XR_001235757;XR_262473 MODEL 8754045 protein-coding Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif 14 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Fraser syndrome 3 (ortholog); FOUND IN extracellular region (ortholog) NW_004955437 20592278 20664075 - 102010945 AGCD01034877;GBDK01317004;XM_005390048;XM_005390049;XM_005390050;XM_005390051;XR_001235098 XP_005390105;XP_005390106;XP_005390107;XP_005390108 MODEL 9012822 pseudo LOC102021782 protein numb homolog pseudogene NW_004955425 17697019 17721168 + 102021782 AGCD01025645;AGCD01025646;AGCD01025647;AGCD01025648 MODEL 8919619 protein-coding Cep120 centrosomal protein 120 INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); atrial heart septal defect (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955521 1452514 1504763 - 102010619 AGCD01068186;GBDF01090147;GBDF01090149;XM_013507086 XP_013362540 MODEL 8939882 protein-coding Col28a1 collagen type XXVIII alpha 1 chain ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN basement membrane (ortholog) NW_004955432 14462226 14634396 - 102026563 AGCD01031043;AGCD01031044;GBDI01162541;XM_005388091;XM_013515903;XM_013515904;XM_013515905;XR_001234639 XP_005388148;XP_013371357;XP_013371358;XP_013371359 MODEL 8823225 protein-coding Afmid arylformamidase ENCODES a protein that exhibits arylformamidase activity (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955506 4351623 4379528 - 102009634 AGCD01065333;AGCD01065334;AGCD01065335;AGCD01065336;AGCD01065337;GBBH01011337;GBBH01166539;XM_005407384;XM_005407386 XP_005407441;XP_005407443 MODEL 9038990 protein-coding Cimip2a ciliary microtubule inner protein 2A INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); ciliary basal body (ortholog); sperm flagellum (ortholog) NW_004955513 5239239 5245859 - 102011572 AGCD01066963;AGCD01066964;GBDK01308056;XM_005408608 XP_005408665 MODEL 8858621 protein-coding Cast calpastatin ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); egg activation (ortholog); liver development (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955418 15859951 15974141 - 102011119 AGCD01019113;AGCD01019114;GBBH01060534;GBCB01042291;XM_013512987 XP_013368441 MODEL 9042548 pseudo LOC102012813 general transcription factor IIH subunit 2-like NW_004955446 10843415 10844092 + 102012813 AGCD01040191 MODEL 8837334 protein-coding Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog); Notch binding (ortholog); INVOLVED IN glutathione catabolic process (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); trans-Golgi network (ortholog) NW_004955416 7828917 7831368 + 102003019 AGCD01017014;GBDK01117054;XM_005381272 XP_005381329 MODEL 9054982 pseudo LOC102009285 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955487 7895732 7897622 - 102009285 AGCD01059414 MODEL 9040257 pseudo LOC102009655 dynein assembly factor 3, axonemal homolog NW_004955441 695019 709803 - 102009655 AGCD01036728;AGCD01036729;AGCD01036730;AGCD01036731 MODEL 8866688 protein-coding Il5ra interleukin 5 receptor subunit alpha ENCODES a protein that exhibits interleukin-5 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-5 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); asthma (ortholog) NW_004955421 10211594 10259760 + 102021980 AGCD01021870;AGCD01021871;AGCD01021872;GBDF01113547;XM_005383750 XP_005383807 MODEL 8937783 protein-coding Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); glycerophosphoinositol inositolphosphodiesterase activity (ortholog); GPI anchor phospholipase C activity (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of cell-matrix adhesion (ortholog); negative regulation of extracellular matrix disassembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN actin filament (ortholog); lamellipodium (ortholog); plasma membrane (ortholog) NW_004955475 9972797 9983145 + 102023802 AGCD01055079;GBBH01062185;XM_005401622;XM_005401623;XM_005401625;XM_005401626;XM_013502885 XP_005401679;XP_005401680;XP_005401682;XP_005401683;XP_013358339 MODEL 8830025 ncrna LOC102017696 uncharacterized LOC102017696 NW_004955435 17195753 17201846 - 102017696 AGCD01033350;GBDF01052175;XR_001234878;XR_261720 MODEL 8929604 protein-coding Jag2 jagged canonical Notch ligand 2 ENCODES a protein that exhibits growth factor activity (ortholog); Notch binding (ortholog); INVOLVED IN auditory receptor cell fate commitment (ortholog); cell differentiation (ortholog); epithelial cell apoptotic process involved in palatal shelf morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 27 (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955538 3421685 3433829 - 102018331 AGCD01071162;GBCE01187516;GBDI01120124;XM_013507878 XP_013363332 MODEL 8821393 protein-coding Trip4 thyroid hormone receptor interactor 4 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); nuclear estrogen receptor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); centronuclear myopathy (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); neuromuscular junction (ortholog) NW_004955450 11005842 11088192 - 102017084 AGCD01042643;AGCD01042644;AGCD01042645;AGCD01042646;AGCD01042647;GBDJ01063421;XM_005393753 XP_005393810 MODEL 39131864 rrna 5S_rRNA 5S ribosomal RNA 8998058 protein-coding Cdh18 cadherin 18 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog) NW_004955426 7914692 8318339 - 102014692 AGCD01026207;AGCD01026208;AGCD01026209;AGCD01026210;AGCD01026211;AGCD01026212;AGCD01026213;AGCD01026214;AGCD01026215;AGCD01026216;GBBH01047132;XM_005386139;XM_005386140;XM_013515025;XM_013515026 XP_005386196;XP_005386197;XP_013370479;XP_013370480 MODEL 8729590 protein-coding Kcnj9 potassium inwardly rectifying channel subfamily J member 9 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN regulation of presynaptic membrane potential (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); FOUND IN inward rectifier potassium channel complex (ortholog); parallel fiber to Purkinje cell synapse (ortholog); presynaptic membrane (ortholog) NW_004955468 11868358 11877298 + 102013275 AGCD01052139;GBBH01087521;XM_005400191;XM_005400192 XP_005400248;XP_005400249 MODEL 8720573 protein-coding Alg12 ALG12 alpha-1,6-mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clubfoot (ortholog) NW_004955413 33030994 33039622 - 102017860 AGCD01014655;GBCB01058939;XM_005379529 XP_005379586 MODEL 8745881 protein-coding Grb10 growth factor receptor bound protein 10 ENCODES a protein that exhibits identical protein binding (ortholog); insulin receptor binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); gene expression (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955456 3405730 3508967 + 102026718 AGCD01046272;AGCD01046273;AGCD01046274;AGCD01046275;AGCD01046276;GBBH01164509;XM_005396599;XM_005396600;XM_013520627 XP_005396656;XP_005396657;XP_013376081 MODEL 10251171 pseudo LOC106149943 retinol dehydrogenase 16-like NW_004955458 4670971 4690548 - 106149943 AGCD01047425;AGCD01047426;AGCD01047427;AGCD01047428;AGCD01047429;AGCD01047430 MODEL 8933937 pseudo LOC102004550 ubiquitin-like protein FUBI pseudogene NW_004955403 20036621 20037044 + 102004550 AGCD01002152 MODEL 9057895 pseudo LOC102008535 plasma membrane calcium-transporting ATPase 1-like NW_004955483 8088963 8090785 + 102008535 AGCD01057826 MODEL 39133794 misc_rna 7SK 7SK RNA 9003709 protein-coding Acadvl acyl-CoA dehydrogenase very long chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); fatty-acyl-CoA binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); atrial heart septal defect (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrial nucleoid (ortholog) NW_004955467 9684070 9689454 - 102003329 AGCD01051521;GBDI01062741;XM_013522095 XP_013377549 MODEL 8846332 ncrna LOC102006682 uncharacterized LOC102006682 NW_004955423 21568062 21582267 + 102006682 AGCD01023945;GBDF01193731;XR_260985 MODEL 8778741 protein-coding Engase endo-beta-N-acetylglucosaminidase ENCODES a protein that exhibits mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity (ortholog); INVOLVED IN protein deglycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955506 3647302 3658676 - 102025928 AGCD01065318;GBDJ01312297;XM_005407343;XM_013506115 XP_005407400;XP_013361569 MODEL 8740323 pseudo LOC102005596 TCDD-inducible poly [ADP-ribose] polymerase pseudogene NW_004955483 1094919 1097507 - 102005596 AGCD01057640 MODEL 8908274 protein-coding Atp6v1a ATPase H+ transporting V1 subunit A ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IID (ortholog); brain disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955427 13868683 13922028 + 102005949 AGCD01027260;AGCD01027261;AGCD01027262;GBDF01087139;XM_005386402;XM_013515121 XP_005386459;XP_013370575 MODEL 8874737 protein-coding Ccdc43 coiled-coil domain containing 43 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955451 17548674 17559168 - 102013138 AGCD01043759;GBDJ01102972;XM_005394533;XM_005394534 XP_005394590;XP_005394591 MODEL 8720420 ncrna LOC102008179 uncharacterized LOC102008179 NW_004955405 32467481 32489401 + 102008179 AGCD01005333;GBDF01013620;XR_001235728 MODEL 39134061 misc_rna 7SK 7SK RNA 8710498 pseudo LOC102007044 nucleolar GTP-binding protein 2 pseudogene NW_004955430 12703634 12705804 - 102007044 AGCD01029509 MODEL 39133926 misc_rna 7SK 7SK RNA 8706936 protein-coding Apod apolipoprotein D ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN glucose metabolic process (ortholog); lipid metabolic process (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); gestational diabetes (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); dendrite (ortholog) NW_004955420 13553254 13570357 + 102024118 AGCD01020925;GBCE01000148;XM_005383177;XM_013513581 XP_005383234;XP_013369035 MODEL 39134363 misc_rna 7SK 7SK RNA 8896106 protein-coding Fbxw5 F-box and WD repeat domain containing 5 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); regulation of centrosome duplication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy 14 (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955513 4993161 4996922 - 102027775 AGCD01066949;GBDF01002330;XM_005408567;XM_005408568 XP_005408624;XP_005408625 MODEL 8781360 ncrna LOC102011604 uncharacterized LOC102011604 NW_004955592 442424 444289 + 102011604 AGCD01076315;GBDF01289807;XR_265137 MODEL 8800725 protein-coding Cct7 chaperonin containing TCP1 subunit 7 ENCODES a protein that exhibits identical protein binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell body (ortholog); chaperonin-containing T-complex (ortholog); microtubule (ortholog) NW_004955424 12379222 12402161 - 102017251 AGCD01024604;GBBH01030873;XM_005385567 XP_005385624 MODEL 8703585 protein-coding Aftph aftiphilin ENCODES a protein that exhibits clathrin binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN AP-1 adaptor complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955424 19835911 19899878 - 102007915 AGCD01024837;AGCD01024838;GBCQ01008748;XM_005385699;XM_005385701 XP_005385756;XP_005385758 MODEL 8781290 protein-coding Cltcl1 clathrin heavy chain like 1 INVOLVED IN mitotic cell cycle (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); receptor-mediated endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); coated vesicle (ortholog) NW_004955442 18688019 18803458 + 102010205 AGCD01038014;AGCD01038015;AGCD01038016;AGCD01038017;AGCD01038018;AGCD01038019;GBCB01006220;XM_005391782;XM_005391783;XM_005391784;XM_005391785;XM_013517955 XP_005391839;XP_005391840;XP_005391841;XP_005391842;XP_013373409 MODEL 8802901 protein-coding Lin9 lin-9 DREAM MuvB core complex component ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955489 431063 491729 - 102010701 AGCD01059804;AGCD01059805;AGCD01059806;GBDK01263599;XM_005404493;XM_013504504;XM_013504505 XP_005404550;XP_013359958;XP_013359959 MODEL 8740092 protein-coding Ebf4 EBF transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); T cell apoptotic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog) NW_004955415 13673700 13734344 + 102017230 AGCD01016264;AGCD01016265;GBDI01078714;XM_005380760;XM_013512386;XM_013512387;XR_001233261;XR_001233262 XP_005380817;XP_013367840;XP_013367841 MODEL 8854725 protein-coding Castor1 cytosolic arginine sensor for mTORC1 subunit 1 ENCODES a protein that exhibits arginine binding (ortholog); identical protein binding (ortholog); molecular sensor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to L-arginine (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); GATOR2 complex (ortholog) NW_004955455 4530842 4535358 - 102018257 AGCD01045679;GBBH01164658;XM_005396250;XM_013520370;XM_013520371 XP_005396307;XP_013375824;XP_013375825 MODEL 8820165 protein-coding LOC102004182 zinc finger protein 14-like NW_004955499 330410 425895 + 102004182 AGCD01063220;AGCD01063221;AGCD01063222;AGCD01063223;AGCD01063224;AGCD01063225;AGCD01063226;AGCD01063227;AGCD01063228;AGCD01063229;AGCD01063230;AGCD01063231;GBCB01041247;XM_005406502;XM_013505562 XP_005406559;XP_013361016 MODEL 9032121 protein-coding Chac2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog) NW_004955441 19502389 19509736 + 102029331 AGCD01037348;GBCB01043730;XM_005391020 XP_005391077 MODEL 39132054 rrna 5S_rRNA 5S ribosomal RNA 8729671 protein-coding Eif2b1 eukaryotic translation initiation factor 2B subunit alpha ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); negative regulation of guanyl-nucleotide exchange factor activity (ortholog); oligodendrocyte development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955482 5380121 5388588 + 102015199 AGCD01057326;GBDF01160540;XM_005403026;XM_013503549 XP_005403083;XP_013359003 MODEL 8953683 protein-coding LOC102011194 cytochrome c oxidase assembly factor 4 homolog, mitochondrial ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955414 17658281 17661867 + 102011194 AGCD01015247;AGCD01015248;GBDF01220602;XM_005379932 XP_005379989 MODEL 39131530 protein-coding BTBD9 BTB domain containing 9 9061429 protein-coding Cacng1 calcium voltage-gated channel auxiliary subunit gamma 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); sarcoplasmic reticulum calcium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); malignant hyperthermia (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog) NW_004955478 6295046 6305625 + 102008723 AGCD01055891;AGCD01055892;GBCB01005162;XM_005402150 XP_005402207 MODEL 39134062 misc_rna 7SK 7SK RNA 8818974 ncrna LOC102021786 uncharacterized LOC102021786 NW_004955429 22132995 22153413 + 102021786 AGCD01029018;AGCD01029019;AGCD01029020;GBDI01041468;XR_001234463;XR_001234464;XR_001234465 MODEL 8701549 pseudo LOC102003845 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955462 10272846 10275300 + 102003845 AGCD01049360 MODEL 8869592 protein-coding Trip6 thyroid hormone receptor interactor 6 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); kinase binding (ortholog); INVOLVED IN chordate embryonic development (ortholog); positive regulation of cell migration (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955573 102649 107047 - 102012378 AGCD01074962;GBCE01054728;XM_005413686 XP_005413743 MODEL 9032256 protein-coding Cep126 centrosomal protein 126 INVOLVED IN cilium assembly (ortholog); cytoplasmic microtubule organization (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); midbody (ortholog) NW_004955412 5262018 5319275 + 102009157 AGCD01012624;GBBH01117515;GBDF01086443;XM_005377967;XM_013511124 XP_005378024;XP_013366578 MODEL 8882241 protein-coding Col2a1 collagen type II alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); identical protein binding (ortholog); MHC class II protein binding (ortholog); INVOLVED IN anterior head development (ortholog); bone development (ortholog); cartilage condensation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH achondrogenesis type II (ortholog); allergic rhinitis (ortholog); Animal Disease Models (ortholog); FOUND IN basement membrane (ortholog); collagen trimer (ortholog); collagen type II trimer (ortholog) NW_004955500 6860771 6885466 - 102023934 AGCD01063893;GBCE01021270;GBDK01076613;XM_013505702 XP_013361156 MODEL 8747479 protein-coding Ift25 intraflagellar transport 25 INVOLVED IN cilium assembly (ortholog); heart development (ortholog); kidney development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); intraciliary transport particle A (ortholog) NW_004955464 5299206 5324136 + 102007636 AGCD01050004;GBDF01224459;XM_005398544;XM_005398545;XM_005398546;XM_005398547;XM_005398549;XM_005398550;XM_013521718;XM_013521719 XP_005398601;XP_005398602;XP_005398603;XP_005398604;XP_005398606;XP_005398607;XP_013377172;XP_013377173 MODEL 9059896 protein-coding Ankrd35 ankyrin repeat domain 35 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955568 204422 222065 + 102004529 AGCD01074506;GBDF01010622;XM_005413430;XM_005413431;XM_005413432;XM_005413433 XP_005413487;XP_005413488;XP_005413489;XP_005413490 MODEL 8850442 protein-coding Kcnk1 potassium two pore domain channel subfamily K member 1 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); ligand-gated channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); chloride transmembrane transport (ortholog); glutamate secretion (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Chronic Periodontitis (ortholog); Deafness (ortholog); Hyperplasia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955492 5805170 5846402 - 102029523 AGCD01060753;GBCE01055129;XM_005404961 XP_005405018 MODEL 39133795 misc_rna 7SK 7SK RNA 8828891 protein-coding Acan aggrecan ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN cartilage condensation (ortholog); cellular response to growth factor stimulus (ortholog); chondroblast differentiation (ortholog); ASSOCIATED WITH achondroplasia (ortholog); Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955416 16125536 16186046 - 102015842 AGCD01017350;AGCD01017351;GBCE01089460;XM_005381703 XP_005381760 MODEL 8959292 pseudo LOC102009287 E3 SUMO-protein ligase PIAS2-like NW_004955421 24211084 24213430 - 102009287 AGCD01022209 MODEL 8883822 ncrna LOC102009657 uncharacterized LOC102009657 NW_004955442 3325633 3327511 + 102009657 AGCD01037505;GBDF01145907;XR_262111 MODEL 8766282 protein-coding Il6 interleukin 6 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); histone H3K9ac reader activity (ortholog); INVOLVED IN autocrine signaling (ortholog); bone remodeling (ortholog); branching involved in salivary gland morphogenesis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH otitis media; Acute Coronary Syndrome (ortholog); Acute Hepatitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); interleukin-6 receptor complex (ortholog) NW_004955410 25079835 25084390 + 102009154 AGCD01011140;GBDF01056731;XM_005377381 XP_005377438 MODEL 8933673 protein-coding LOC102017700 olfactory receptor 2D2-like NW_004955537 2595360 2596310 + 102017700 AGCD01070931;XM_005410720 XP_005410777 MODEL 8892207 protein-coding Jagn1 jagunal vesicle mediated transporter 1 INVOLVED IN defense response to fungus (ortholog); granulocyte colony-stimulating factor signaling pathway (ortholog); insulin metabolic process (ortholog); ASSOCIATED WITH frontotemporal dementia and/or amyotrophic lateral sclerosis 7 (ortholog); genetic disease (ortholog); neutropenia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955561 1388592 1392107 + 102013767 AGCD01073854;GBBH01205209;XM_005413051;XM_013509092 XP_005413108;XP_013364546 MODEL 8943084 protein-coding Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phosphatidylcholine catabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lipid storage disease (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955493 6876943 6883716 + 102021563 AGCD01061147;GBCE01188319;XM_005405185 XP_005405242 MODEL 8984424 pseudo LOC102007046 protein SET-like NW_004955515 1700873 1701654 - 102007046 AGCD01067233 MODEL 8915836 protein-coding Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor ENCODES a protein that exhibits 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity (ortholog); rRNA (adenine-N6,N6-)-dimethyltransferase activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); ribosomal small subunit biogenesis (ortholog); rRNA methylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) NW_004955446 6235004 6244422 + 102025522 AGCD01040090;GBDF01225076;XM_005392642;XM_013518423 XP_005392699;XP_013373877 MODEL 8990640 pseudo LOC102004551 small nuclear ribonucleoprotein-associated protein B pseudogene NW_004955451 1697358 1700887 - 102004551 AGCD01042977;AGCD01042978 MODEL 9038269 protein-coding Cimip2b ciliary microtubule inner protein 2B INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Meckel syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955472 695955 698086 + 102010689 AGCD01053351;GBDI01135534;XM_013522960;XM_013522961;XM_013522962;XM_013522963 XP_013378414;XP_013378415;XP_013378416;XP_013378417 MODEL 8702117 protein-coding Alg13 ALG13 UDP-N-acetylglucosaminyltransferase subunit ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); negative regulation of TORC1 signaling (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955490 4069866 4140494 - 102030323 AGCD01060180;AGCD01060181;AGCD01060182;GBCE01134171;XM_005404636;XM_005404639;XM_005404642;XM_013504527;XM_013504528;XM_013504529;XM_013504530;XM_013504531;XM_013504532;XM_013504533;XM_013504534 XP_005404693;XP_005404696;XP_005404699;XP_013359981;XP_013359982;XP_013359983;XP_013359984;XP_013359985;XP_013359986;XP_013359987;XP_013359988 MODEL 8873619 pseudo LOC102008537 60S ribosomal protein L39 pseudogene NW_004955420 7015115 7015474 - 102008537 AGCD01020693;XM_005383030 MODEL 9012535 pseudo LOC102012815 poly(rC)-binding protein 2 pseudogene NW_004955576 1428099 1429219 + 102012815 AGCD01075376 MODEL 10319509 protein-coding LOC106149944 UPF0317 protein KRH_21160-like NW_004955458 9381874 9396866 + 106149944 AGCD01047640;GBCE01061454;XM_013520806 XP_013376260 MODEL 8721089 ncrna LOC102010412 uncharacterized LOC102010412 NW_004955545 2843891 2852564 - 102010412 AGCD01071925;GBDI01188014;XR_264882 MODEL 9048215 protein-coding Cct8 chaperonin containing TCP1 subunit 8 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) NW_004955407 28414583 28427964 - 102025540 AGCD01007586;GBCQ01033352;XM_005375612;XM_005375613 XP_005375669;XP_005375670 MODEL 8897914 ncrna LOC102006684 uncharacterized LOC102006684 NW_004955497 7496522 7500425 - 102006684 AGCD01062678;GBDJ01389347;XR_001231425;XR_264211 MODEL 8849562 protein-coding Enho energy homeostasis associated ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN energy homeostasis (ortholog); positive regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955472 1597488 1599274 + 102028290 AGCD01053403;GBCB01042932;GBDI01326897;XM_005401075 XP_005401132 MODEL 8955590 protein-coding Ankrd37 ankyrin repeat domain 37 FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955403 23655501 23658069 - 102028256 AGCD01002249;GBDI01027968;XM_005373469;XM_013513001 XP_005373526;XP_013368455 MODEL 8923858 pseudo LOC102005598 pre-mRNA-splicing factor SLU7 pseudogene NW_004955419 21338887 21343992 - 102005598 AGCD01020272 MODEL 8952964 protein-coding Ccdc47 coiled-coil domain containing 47 ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); ribosome binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog) NW_004955478 8053057 8074530 + 102020803 AGCD01056005;GBDF01086670;XM_005402187;XM_005402188 XP_005402244;XP_005402245 MODEL 8758678 protein-coding Atp6v1b1 ATPase H+ transporting V1 subunit B1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); ATP metabolic process (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); cervical cancer (ortholog); Distal Renal Tubular Acidosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955424 14256096 14281572 - 102029761 AGCD01024648;AGCD01024649;GBCE01141930;XM_005385605 XP_005385662 MODEL 8885480 protein-coding LOC102008182 glutathione S-transferase theta-1-like NW_004955455 8317663 8323287 - 102008182 AGCD01045886;GBBH01177305;XM_005396408 XP_005396465 MODEL 8709960 protein-coding Erln endoregulin INVOLVED IN negative regulation of ATPase-coupled calcium transmembrane transporter activity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955506 6590028 6592474 - 102014927 AGCD01065432;GBDF01040884;XM_005407489 XP_005407546 MODEL 39131865 rrna 5S_rRNA 5S ribosomal RNA 9048916 protein-coding Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif 15 ENCODES a protein that exhibits endopeptidase activity (ortholog); extracellular matrix binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955412 31336759 31360905 + 102023678 AGCD01013336;AGCD01013337;GBDI01296458;XM_005378569 XP_005378626 MODEL 8758661 protein-coding Cdh19 cadherin 19 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955402 50110907 50213882 - 102029135 AGCD01001249;AGCD01001250;AGCD01001251;AGCD01001252;AGCD01001253;AGCD01001254;AGCD01001255;GBBH01205183;XM_013511279 XP_013366733 MODEL 9000373 protein-coding Apoe apolipoprotein E ENCODES a protein that exhibits amyloid-beta binding (ortholog); antioxidant activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); amyloid precursor protein metabolic process (ortholog); artery development (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); adenocarcinoma (ortholog); age related macular degeneration 1 (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); chylomicron remnant (ortholog) NW_004955555 1998170 2002003 + 102021605 AGCD01073120;AGCD01073121;GBBH01000498;GBDJ01017825;XM_013508700 XP_013364154 MODEL 8765260 protein-coding Hspa14 heat shock protein family A (Hsp70) member 14 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); protein folding chaperone complex (ortholog); ribosome (ortholog) NW_004955429 19533586 19577834 - 102024939 AGCD01028964;AGCD01028965;GBCB01073264;GBDF01125228;XM_013515372 XP_013370826 MODEL 8721499 protein-coding Fbxw7 F-box and WD repeat domain containing 7 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); phosphothreonine residue binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); lung development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); alveolar rhabdomyosarcoma (ortholog); basal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955471 6852459 7026590 - 102025567 AGCD01053132;AGCD01053133;GBDF01249324;XM_005400897;XM_005400898;XM_005400900;XM_005400901 XP_005400954;XP_005400955;XP_005400957;XP_005400958 MODEL 8887094 protein-coding LOC102011607 3-beta-hydroxysteroid sulfotransferase-like NW_004955609 280400 319841 - 102011607 AGCD01077056;AGCD01077057;GBCB01061931;XM_005414930 XP_005414987 MODEL 8782591 protein-coding LOC102003846 aldose reductase NW_004955410 33554985 33569352 + 102003846 AGCD01011372;AGCD01011373;GBCQ01005098;XM_005377536 XP_005377593 MODEL 41410893 protein-coding LINC00672 long intergenic non-protein coding RNA 672 8821097 protein-coding Col3a1 collagen type III alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); integrin binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN aorta development (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); basement membrane organization (ortholog); PARTICIPATES IN endothelin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media; abdominal aortic aneurysm (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN collagen trimer (ortholog); collagen type III trimer (ortholog); extracellular matrix (ortholog) NW_004955403 9720831 9758019 - 102009337 AGCD01001913;GBCE01001025;XM_005373324 XP_005373381 MODEL 9058658 protein-coding Cltrn collectrin, amino acid transport regulator ENCODES a protein that exhibits protein homodimerization activity (ortholog); transporter activator activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); calcium-ion regulated exocytosis (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955519 2522154 2569722 + 102014702 AGCD01067936;AGCD01067937;GBCE01101633;XM_005409160;XM_005409161;XM_013507008;XM_013507009;XM_013507010 XP_005409217;XP_005409218;XP_013362462;XP_013362463;XP_013362464 MODEL 39132056 rrna 5S_rRNA 5S ribosomal RNA 8764433 protein-coding LOC102012817 histone H2B type 3-B NW_004955581 91596 93803 - 102012817 AGCD01075657;XM_005414232 XP_005414289 MODEL 8956595 protein-coding Chad chondroadherin INVOLVED IN bone development (ortholog); cartilage condensation (ortholog); negative regulation of bone trabecula formation (ortholog) NW_004955451 11285822 11289644 + 102013038 AGCD01043345;GBBH01207076;XM_005394170 XP_005394227 MODEL 8784244 protein-coding LOC102009660 protein HIRA ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN gastrulation (ortholog); muscle cell differentiation (ortholog); osteoblast differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); HIR complex (ortholog); nucleoplasm (ortholog) NW_004955442 18581370 18673590 + 102009660 AGCD01038011;AGCD01038012;GBCQ01129723;GBDI01264132;XM_005391780 XP_005391837 MODEL 8713447 protein-coding Eif2b2 eukaryotic translation initiation factor 2B subunit beta ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN central nervous system development (ortholog); cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955523 553356 559376 - 102014819 AGCD01068464;GBDF01154329;XM_005409380 XP_005409437 MODEL 8799087 protein-coding LOC102011197 vomeronasal type-1 receptor 90-like NW_004955414 14915467 14916408 - 102011197 AGCD01015162;XM_005380438 XP_005380495 MODEL 8858068 protein-coding Il6r interleukin 6 receptor ENCODES a protein that exhibits ciliary neurotrophic factor binding (ortholog); ciliary neurotrophic factor receptor activity (ortholog); cytokine receptor activity (ortholog); INVOLVED IN autocrine signaling (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); ciliary neurotrophic factor receptor complex (ortholog) NW_004955545 932814 979359 + 102022428 AGCD01071826;AGCD01071827;AGCD01071828;AGCD01071829;AGCD01071830;GBBH01050791;XM_013508348;XM_013508349 XP_013363802;XP_013363803 MODEL 8865214 protein-coding Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN eye blink reflex (ortholog); membrane depolarization (ortholog); membrane hyperpolarization (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 10 (ortholog); childhood absence epilepsy (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell surface (ortholog); cerebellar mossy fiber (ortholog) NW_004955413 23136369 23248231 - 102021115 AGCD01014328;AGCD01014329;XM_005379165 XP_005379222 MODEL 39134364 misc_rna 7SK 7SK RNA 39134063 misc_rna 7SK 7SK RNA 8844016 protein-coding Btbd9 BTB domain containing 9 INVOLVED IN adult locomotory behavior (ortholog); circadian behavior (ortholog); circadian sleep/wake cycle, non-REM sleep (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog) NW_004955437 4765234 5145033 + 102015147 AGCD01034370;AGCD01034371;AGCD01034372;AGCD01034373;AGCD01034374;AGCD01034375;AGCD01034376;AGCD01034377;AGCD01034378;GBDF01043958;XM_005390124;XM_013516988 XP_005390181;XP_013372442 MODEL 8862386 protein-coding Grb14 growth factor receptor bound protein 14 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphoprotein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); insulin receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955449 9466764 9589559 + 102014959 AGCD01042047;AGCD01042048;AGCD01042049;GBBH01077680;GBCE01008663;XM_013518791 XP_013374245 MODEL 9037569 protein-coding Gdpd4 glycerophosphodiester phosphodiesterase domain containing 4 ENCODES a protein that exhibits GPI anchor phospholipase C activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955414 14471320 14564089 + 102010686 AGCD01015151;AGCD01015152;AGCD01015153;AGCD01015154;AGCD01015155;GBDF01002348;XM_005379839;XM_005379840 XP_005379896;XP_005379897 MODEL 9059923 pseudo LOC102004556 chromatin target of PRMT1 protein pseudogene NW_004955454 5724497 5725303 + 102004556 AGCD01045185 MODEL 8730449 protein-coding Cep128 centrosomal protein 128 INVOLVED IN intracellular protein localization (ortholog); motile cilium assembly (ortholog); negative regulation of cilium assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955438 4194572 4601759 - 102025396 AGCD01035038;AGCD01035039;AGCD01035040;AGCD01035041;AGCD01035042;AGCD01035043;AGCD01035044;AGCD01035045;AGCD01035046;GBDF01080809;XM_005390234 XP_005390291 MODEL 8702851 protein-coding LOC102004199 trace amine-associated receptor 9 NW_004955436 13004804 13005842 + 102004199 AGCD01033849;XM_005415376 XP_005415433 MODEL 9065947 protein-coding Aga aspartylglucosaminidase ENCODES a protein that exhibits identical protein binding (ortholog); N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity (ortholog); INVOLVED IN protein deglycosylation (ortholog); ASSOCIATED WITH aspartylglucosaminuria (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955403 30471809 30482653 + 102014731 AGCD01002398;GBDF01156718;XM_005373511 XP_005373568 MODEL 8965988 ncrna LOC102010413 uncharacterized LOC102010413 NW_004955440 18515406 18523978 + 102010413 AGCD01036611;AGCD01036612;GBDI01160681;XR_262044 MODEL 8758162 protein-coding Ebi3 Epstein-Barr virus induced 3 ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-27 receptor binding (ortholog); INVOLVED IN regulation of T cell proliferation (ortholog); T cell proliferation (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); interleukin-35 complex (ortholog); signaling receptor complex (ortholog) NW_004955495 4609841 4615686 - 102011676 AGCD01061936;GBBH01211598;XM_005405807 XP_005405864 MODEL 10302046 protein-coding LOC106149945 coiled-coil domain-containing protein 86-like NW_004955458 10689606 10703839 + 106149945 AGCD01047701;GBCQ01086243;XM_013520807 XP_013376261 MODEL 8824522 protein-coding Kcnk10 potassium two pore domain channel subfamily K member 10 ENCODES a protein that exhibits mechanosensitive potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to arachidonate (ortholog); memory (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); Deafness (ortholog); FOUND IN plasma membrane (ortholog) NW_004955438 10867695 10996005 - 102005182 AGCD01035218;AGCD01035219;AGCD01035220;GBDF01262571;XM_005390252 XP_005390309 MODEL 39133927 misc_rna 7SK 7SK RNA 8982443 ncrna LOC102011610 uncharacterized LOC102011610 NW_004955451 5820260 5823021 - 102011610 AGCD01043179;GBDJ01389060;XR_001236001;XR_001236002 MODEL 10285507 protein-coding Alg14 ALG14 UDP-N-acetylglucosaminyltransferase subunit ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 15 (ortholog); congenital myopathy (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); UDP-N-acetylglucosamine transferase complex (ortholog) NW_004955435 162570 273924 - 106146266 AGCD01032715;AGCD01032716;AGCD01032717;AGCD01032718;AGCD01032719;AGCD01032720;GBDK01276824;XM_013516477;XM_013516478;XM_013516479;XM_013516480;XM_013516481 XP_013371931;XP_013371932;XP_013371933;XP_013371934;XP_013371935 MODEL 8793304 protein-coding LOC102017702 natural cytotoxicity triggering receptor 2 NW_004955437 7878039 7880780 + 102017702 AGCD01034470;XM_013516719 XP_013372173 MODEL 8906269 protein-coding LOC102006686 granulocyte-macrophage colony-stimulating factor receptor subunit alpha NW_004955499 987241 1000290 + 102006686 AGCD01063304;AGCD01063305;GBCE01182198;XM_005406506;XM_005406507 XP_005406563;XP_005406564 MODEL 39131866 rrna 5S_rRNA 5S ribosomal RNA 8933132 protein-coding Clu clusterin ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP hydrolysis activity (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); cell morphogenesis (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN aggresome (ortholog); apical dendrite (ortholog); cell periphery (ortholog) NW_004955403 50160598 50175876 - 102007076 AGCD01002959;GBDF01127388;XM_005373750;XM_013514284 XP_005373807;XP_013369738 MODEL 8962214 protein-coding LOC102021787 olfactory receptor 8K3-like NW_004955511 5111091 5112029 + 102021787 AGCD01066549;XM_013506405 XP_013361859 MODEL 8788368 protein-coding Dio1 iodothyronine deiodinase 1 ENCODES a protein that exhibits selenium binding (ortholog); thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); thyroid hormone catabolic process (ortholog); thyroid hormone metabolic process (ortholog); ASSOCIATED WITH Abnormal Thyroid Hormone Metabolism 2 (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955464 5340219 5355182 - 102007314 AGCD01050004;GBDI01002388;XM_013521716 XP_013377170 MODEL 8824582 pseudo LOC102007047 hippocampus abundant transcript-like protein 1 pseudogene NW_004955516 606224 607991 + 102007047 AGCD01067389 MODEL 9044392 protein-coding LOC102011198 signal-regulatory protein beta-1 NW_004955415 12897443 12955738 - 102011198 AGCD01016236;AGCD01016237;GBCE01043667;XM_013512246;XM_013512247;XM_013512248 XP_013367700;XP_013367701;XP_013367702 MODEL 39131557 protein-coding APOF apolipoprotein F 8745741 protein-coding Ift27 intraflagellar transport 27 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cochlea development (ortholog); inner ear receptor cell stereocilium organization (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 19 (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955413 23295549 23310824 - 102021645 AGCD01014329;GBCE01172334;XM_005379168;XM_013511657;XM_013511658;XM_013511659;XR_001233043 XP_005379225;XP_013367111;XP_013367112;XP_013367113 MODEL 39133796 misc_rna 7SK 7SK RNA 8699639 protein-coding LOC102008539 sodium- and chloride-dependent transporter XTRP3A-like NW_004955420 26201378 26228005 + 102008539 AGCD01021392;AGCD01021393;AGCD01021394;AGCD01021395;GBCQ01102604;XM_013513346 XP_013368800 MODEL 8799998 protein-coding Acap1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955467 9568455 9583279 - 102018582 AGCD01051518;AGCD01051519;GBDI01062258;XM_005399511;XM_013522119;XR_001236859 XP_005399568;XP_013377573 MODEL 8989621 protein-coding Ankrd39 ankyrin repeat domain 39 ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955470 4203363 4211560 - 102023576 AGCD01052728;GBCQ01042505;XM_005400684 XP_005400741 MODEL 39132058 rrna 5S_rRNA 5S ribosomal RNA 8722159 protein-coding Enkd1 enkurin domain containing 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN establishment of mitotic spindle orientation (ortholog); motile cilium assembly (ortholog); non-motile cilium assembly (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955484 9015744 9019781 + 102025124 AGCD01058403;GBDJ01311527;XM_005403628;XM_005403629 XP_005403685;XP_005403686 MODEL 8926598 gene LOC102008184 Ig lambda-2 chain V region-like NW_004955455 6522852 6523304 + 102008184 AGCD01045801;XM_005396573 MODEL 8946723 protein-coding Atp6v1b2 ATPase H+ transporting V1 subunit B2 INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autosomal dominant congenital deafness with onychodystrophy (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 43860811 43886398 + 102024869 AGCD01002789;GBBH01090243;XM_005373627 XP_005373684 MODEL 8781372 protein-coding Chadl chondroadherin like ENCODES a protein that exhibits collagen binding (ortholog); collagen fibril binding (ortholog); INVOLVED IN negative regulation of chondrocyte differentiation (ortholog); negative regulation of collagen fibril organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); Osteoarthritis, Hip (ortholog); FOUND IN extracellular region (ortholog); gel phase of interstitial matrix (ortholog) NW_004955413 26846714 26862082 - 102012085 AGCD01014482;AGCD01014483;AGCD01014484;GBBH01207075;XM_013511352 XP_013366806 MODEL 8953129 protein-coding Jak1 Janus kinase 1 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); growth hormone receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interleukin-3 (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; interleukin-2 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute myeloid leukemia (ortholog); Autoinflammation, Immune Dysregulation, and Eosinophilia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955423 25501989 25581826 + 102025478 AGCD01024080;AGCD01024081;GBDF01083837;XM_005385305;XM_005385307;XM_005385308 XP_005385362;XP_005385364;XP_005385365 MODEL 8939608 protein-coding Cdh2 cadherin 2 ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); brain morphogenesis (ortholog); calcium-dependent cell-cell adhesion (ortholog); PARTICIPATES IN cadherin mediated signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); agenesis of corpus callosum, cardiac, ocular, and genital syndrome (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apical plasma membrane (ortholog) NW_004955402 15829895 16049874 - 102016116 AGCD01000465;AGCD01000466;AGCD01000467;AGCD01000468;GBCC01009639;GBDF01153440;XM_005372737 XP_005372794 MODEL 8922269 protein-coding Cimip2c ciliary microtubule inner protein 2C INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955469 8588820 8603333 + 102014346 AGCD01052476;GBDF01047461;XM_005400436 XP_005400493 MODEL 8801185 ncrna LOC102009289 uncharacterized LOC102009289 NW_004955422 20690361 20700604 - 102009289 AGCD01023085;AGCD01023086;GBCB01050340;XR_260904 MODEL 8800184 protein-coding Hspa2 heat shock protein family A (Hsp70) member 2 ENCODES a protein that exhibits enzyme binding (ortholog); glycolipid binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN male meiosis I (ortholog); male meiotic nuclear division (ortholog); negative regulation of inclusion body assembly (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Myocardial Ischemia (ortholog); FOUND IN CatSper complex (ortholog); cell surface (ortholog); cytosol (ortholog) NW_004955466 5344366 5347707 - 102027280 AGCD01050876;GBDF01007443;XM_005399120 XP_005399177 MODEL 9046018 protein-coding Cct8l2 chaperonin containing TCP1 subunit 8 like 2 NW_004955491 6498532 6500957 + 102012766 AGCD01060534;GBDF01118259;XM_005404846 XP_005404903 MODEL 8917461 protein-coding Castor2 cytosolic arginine sensor for mTORC1 subunit 2 ENCODES a protein that exhibits arginine binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to L-arginine (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytosol (ortholog); GATOR2 complex (ortholog) NW_004955456 13242401 13282469 + 102013907 AGCD01046582;AGCD01046583;GBCE01052863;GBCQ01174661;XM_005396733 XP_005396790 MODEL 8797383 protein-coding LOC102003847 NADH-cytochrome b5 reductase-like ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955464 5065935 5087968 + 102003847 AGCD01049998;AGCD01049999;GBDJ01349008;XM_005398530;XM_005398531;XM_013521665 XP_005398587;XP_005398588;XP_013377119 MODEL 8929827 pseudo LOC102004203 programmed cell death protein 5 pseudogene NW_004955543 543218 543599 + 102004203 AGCD01071590;XM_005411306 MODEL 8921307 ncrna LOC102008548 uncharacterized LOC102008548 NW_004955423 309053 319789 + 102008548 AGCD01023411;GBDF01260789;XR_260936 MODEL 8953583 protein-coding Cep131 centrosomal protein 131 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN intraciliary transport (ortholog); intraciliary transport involved in cilium assembly (ortholog); intramanchette transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); centriolar satellite (ortholog); centriole (ortholog) NW_004955506 1783717 1809665 + 102010926 AGCD01065273;AGCD01065274;GBDF01090011;XM_005407297;XM_005407300;XM_005407301;XM_005407302 XP_005407354;XP_005407357;XP_005407358;XP_005407359 MODEL 8910733 protein-coding Col4a1 collagen type IV alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); extracellular matrix structural constituent conferring tensile strength (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN basement membrane organization (ortholog); blood vessel morphogenesis (ortholog); brain development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); Agenesis of Corpus Callosum (ortholog); angioedema (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) NW_004955404 2196193 2327324 + 102021412 AGCD01003250;AGCD01003251;AGCD01003252;GBDJ01122027;XM_013516808 XP_013372262 MODEL 8709907 protein-coding Ccdc50 coiled-coil domain containing 50 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 44 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955420 16884985 16948038 - 102013510 AGCD01021008;AGCD01021009;AGCD01021010;AGCD01021011;GBCE01117027;XM_005383218 XP_005383275 MODEL 9058724 protein-coding Ermap erythroblast membrane associated protein (Scianna blood group) ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955537 2340282 2360925 + 102016848 AGCD01070925;AGCD01070926;AGCD01070927;GBBH01072402;XM_013507744;XM_013507745 XP_013363198;XP_013363199 MODEL 39133928 misc_rna 7SK 7SK RNA 8778321 pseudo LOC102011611 spliceosome-associated protein CWC15 homolog pseudogene NW_004955403 25832090 25832764 + 102011611 AGCD01002295 MODEL 8708577 protein-coding Triqk triple QxxK/R motif containing ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955417 9397726 9450794 - 102017014 AGCD01018052;GBDK01025200;XM_005381781;XM_005381782;XM_005381783;XM_013512847;XM_013512848 XP_005381838;XP_005381839;XP_005381840;XP_013368301;XP_013368302 MODEL 39134365 misc_rna 7SK 7SK RNA 8788712 protein-coding Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); male gamete generation (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955504 3167142 3320632 + 102022834 AGCD01064864;AGCD01064865;AGCD01064866;AGCD01064867;GBCQ01126940;XM_013505868 XP_013361322 MODEL 8825018 protein-coding Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH childhood absence epilepsy (ortholog); macular degeneration (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite (ortholog); excitatory synapse (ortholog) NW_004955493 2742096 2841353 + 102024018 AGCD01060962;AGCD01060963;AGCD01060964;AGCD01060965;AGCD01060966;AGCD01060967;AGCD01060968;AGCD01060969;XM_005405105 XP_005405162 MODEL 9059226 protein-coding Btc betacellulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN epidermal growth factor receptor signaling pathway (ortholog); ERBB2-EGFR signaling pathway (ortholog); ERBB4-ERBB4 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); erythropoietic protoporphyria (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular region (ortholog) NW_004955474 895573 946152 - 102007545 AGCD01054231;AGCD01054232;GBCB01020646;XM_005401314 XP_005401371 MODEL 8982095 protein-coding Grb2 growth factor receptor bound protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); anatomical structure formation involved in morphogenesis (ortholog); B cell receptor signaling pathway (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); cell-cell junction (ortholog); COP9 signalosome (ortholog) NW_004955553 2186590 2258964 - 102026679 AGCD01072930;AGCD01072931;AGCD01072932;AGCD01072933;GBDK01071707;XM_005412295 XP_005412352 MODEL 8827423 protein-coding LOC102021788 major urinary protein-like NW_004955513 4818849 4823574 - 102021788 AGCD01066940;GBDK01223614;XM_005408549 XP_005408606 MODEL 8802803 protein-coding LOC102007048 liver carboxylesterase 1-like NW_004955433 13239101 13268057 - 102007048 AGCD01031682;GBDF01064548;XM_005388323;XM_005388325 XP_005388380;XP_005388382 MODEL 39133797 misc_rna 7SK 7SK RNA 8973606 protein-coding Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 ENCODES a protein that exhibits glycerophosphocholine phosphodiesterase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN cerebral cortex neuron differentiation (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); negative regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); endomembrane system (ortholog); membrane (ortholog) NW_004955414 16322705 16416036 + 102026098 AGCD01015209;AGCD01015210;AGCD01015211;AGCD01015212;GBBH01206648;GBCQ01114411;XM_005379889 XP_005379946 MODEL 8881798 pseudo LOC102004558 U1 small nuclear ribonucleoprotein C-like NW_004955406 37620864 37621806 - 102004558 AGCD01006576 MODEL 8889750 protein-coding LOC102010423 olfactory receptor 7G2-like NW_004955563 285695 286633 - 102010423 AGCD01074059;XM_013509134 XP_013364588 MODEL 39131512 protein-coding EBI3 Epstein-Barr virus induced 3 39131350 protein-coding KCNK12 potassium two pore domain channel subfamily K member 12 8737297 protein-coding LOC102012822 sulfotransferase family cytosolic 2B member 1-like NW_004955804 1914 12609 + 102012822 AGCD01078378;AGCD01078379;GBCE01003625;XM_005415116 XP_005415173 MODEL 8754528 protein-coding Acap2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament-based process (ortholog); cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endosome membrane (ortholog); plasma membrane (ortholog); ruffle (ortholog) NW_004955420 13649482 13777353 + 102025801 AGCD01020926;AGCD01020927;AGCD01020928;AGCD01020929;GBDF01188123;XM_005383183;XM_005383184 XP_005383240;XP_005383241 MODEL 8756323 protein-coding Alg2 ALG2 alpha-1,3/1,6-mannosyltransferase ENCODES a protein that exhibits alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); axonal neuropathy (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955419 26423243 26427384 + 102015523 AGCD01020408;GBCQ01093153;XM_005382821 XP_005382878 MODEL 9062087 protein-coding Eif2b3 eukaryotic translation initiation factor 2B subunit gamma ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); oligodendrocyte development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955464 13254228 13378832 + 102006109 AGCD01050265;AGCD01050266;AGCD01050267;AGCD01050268;AGCD01050269;AGCD01050270;AGCD01050271;AGCD01050272;AGCD01050273;AGCD01050274;GBDF01071578;XM_005398721;XM_005398723;XM_005398724 XP_005398778;XP_005398780;XP_005398781 MODEL 8709430 ncrna LOC102017705 uncharacterized LOC102017705 NW_004955439 13711628 13716911 + 102017705 AGCD01035964;GBDF01041651;XR_261989 MODEL 39134064 misc_rna 7SK 7SK RNA 8762757 pseudo LOC102006688 actin-related protein 2/3 complex subunit 1A pseudogene NW_004955426 11475451 11481911 - 102006688 AGCD01026317 MODEL 39131867 rrna 5S_rRNA 5S ribosomal RNA 8972759 protein-coding Fbxw8 F-box and WD repeat domain containing 8 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); Golgi organization (ortholog); labyrinthine layer blood vessel development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN 3M complex (ortholog); Cul7-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955455 14099888 14204889 - 102023980 AGCD01046082;AGCD01046083;AGCD01046084;GBBH01114652;XM_005396550;XM_013520439 XP_005396607;XP_013375893 MODEL 8953689 pseudo LOC102011201 40S ribosomal protein S27-like pseudogene NW_004955477 3377398 3380933 - 102011201 AGCD01055553 MODEL 8991735 protein-coding Linc02874 long intergenic non-protein coding RNA 2874 NW_004955547 2545043 2551414 - 102017816 AGCD01072283;XM_013508444 XP_013363898 MODEL 8831014 protein-coding Jak2 Janus kinase 2 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); growth hormone receptor binding (ortholog); heme binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); axon regeneration (ortholog); cell adhesion (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered Jak-Stat signaling pathway; angiotensin II signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN caveola (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955434 9227897 9341208 + 102028890 AGCD01032292;AGCD01032293;AGCD01032294;AGCD01032295;AGCD01032296;AGCD01032297;AGCD01032298;AGCD01032299;GBCB01056844;GBDJ01080996;XM_005388653 XP_005388710 MODEL 8950071 protein-coding Il6st interleukin 6 cytokine family signal transducer ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); ciliary neurotrophic factor receptor binding (ortholog); coreceptor activity (ortholog); INVOLVED IN autocrine signaling (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); Alzheimer's disease (ortholog); FOUND IN cell body (ortholog); ciliary neurotrophic factor receptor complex (ortholog); dendrite (ortholog) NW_004955446 11790636 11837734 + 102013983 AGCD01040212;AGCD01040213;GBDF01189975;GBDK01071858;XM_005392688 XP_005392745 MODEL 8936850 pseudo LOC102005606 eukaryotic translation initiation factor 5A-2 pseudogene NW_004955422 22271814 22272275 - 102005606 AGCD01023153 MODEL 8957214 protein-coding Apof apolipoprotein F INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); triglyceride metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955458 3973734 3978312 - 102009020 AGCD01047359;GBDI01064583;GBDK01007513;XM_005397312 XP_005397369 MODEL 8941553 ncrna LOC102009664 uncharacterized LOC102009664 NW_004955566 1804100 1820455 - 102009664 AGCD01074369;GBDI01312924;XR_001232397;XR_001232398;XR_001232399;XR_265024 MODEL 10095784 protein-coding LOC106149946 translation initiation factor IF-2-like NW_004955458 11157507 11161567 + 106149946 AGCD01047725;GBCQ01140813;GBDI01088795;XM_013520808 XP_013376262 MODEL 8716117 pseudo LOC102008549 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 pseudogene NW_004955495 3015938 3016703 + 102008549 AGCD01061815 MODEL 39132061 rrna 5S_rRNA 5S ribosomal RNA 8981905 protein-coding Kcnk12 potassium two pore domain channel subfamily K member 12 ENCODES a protein that exhibits identical protein binding (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Lynch syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955441 14270030 14281639 - 102018338 AGCD01037191;AGCD01037192;AGCD01037193;GBDF01001426;XM_013517518 XP_013372972 MODEL 39133929 misc_rna 7SK 7SK RNA 8946897 protein-coding Enkur enkurin, TRPC channel interacting protein ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN establishment of left/right asymmetry (ortholog); flagellated sperm motility (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); acrosomal vesicle (ortholog) NW_004955429 4182507 4203275 + 102007452 AGCD01028483;GBDF01085329;XM_005386899;XM_005386900 XP_005386956;XP_005386957 MODEL 8728610 protein-coding Dio2 iodothyronine deiodinase 2 ENCODES a protein that exhibits thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); lipid metabolic process (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955438 3946830 3961049 - 102023633 AGCD01035034;GBCE01029600;XM_005390230;XM_013517246 XP_005390287;XP_013372700 MODEL 8771587 protein-coding Atp6v1c1 ATPase H+ transporting V1 subunit C1 ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); DOORS syndrome (ortholog); FOUND IN apical part of cell (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955417 27340916 27376541 + 102020804 AGCD01018548;AGCD01018549;AGCD01018550;AGCD01018551;GBCE01052289;GBCE01052294;XM_013512778;XM_013512779 XP_013368232;XP_013368233 MODEL 8745727 protein-coding Trir telomerase RNA component interacting RNase ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-3' exonuclease activity (ortholog); INVOLVED IN rRNA catabolic process (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955415 31831093 31834796 - 102020242 AGCD01016698;GBDK01012972;XM_005381022 XP_005381079 MODEL 8974181 protein-coding Cdh20 cadherin 20 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); sarcoma (ortholog) NW_004955402 45340824 45543088 + 102018044 AGCD01001136;AGCD01001137;AGCD01001138;AGCD01001139;AGCD01001140;GBBH01157982;XM_005373010 XP_005373067 MODEL 8752126 protein-coding Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to glycine (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955458 5436544 5448201 - 102002999 AGCD01047492;AGCD01047493;GBBH01126322;GBDJ01164672;XM_013520942 XP_013376396 MODEL 8905218 protein-coding Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif 17 ASSOCIATED WITH anterior segment dysgenesis (ortholog); brachydactyly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955416 27128066 27434826 - 102019062 AGCD01017610;AGCD01017611;AGCD01017612;AGCD01017613;AGCD01017614;AGCD01017615;GBCE01108669;GBDJ01093005;XM_013512522;XM_013512523 XP_013367976;XP_013367977 MODEL 9048828 pseudo LOC102021796 ras-related protein Ral-A pseudogene NW_004955436 344054 347031 - 102021796 AGCD01033541 MODEL 9031057 protein-coding Hspa4 heat shock protein family A (Hsp70) member 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); kidney development (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); extracellular exosome (ortholog); lipid droplet (ortholog) NW_004955408 4379825 4422710 + 102008290 AGCD01008110;AGCD01008111;AGCD01008112;GBDF01051107;XM_005376122 XP_005376179 MODEL 8875025 protein-coding Btd biotinidase ENCODES a protein that exhibits biotinidase activity (ortholog); INVOLVED IN biotin metabolic process (ortholog); PARTICIPATES IN biotin metabolic pathway; biotinidase deficiency pathway; holocarboxylase synthetase deficiency pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); biotin deficiency (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog); nucleolus (ortholog) NW_004955430 7960036 7988754 + 102022111 AGCD01029378;GBDF01001926;XM_005387438;XM_005387439;XM_005387440;XM_005387441;XM_005387442;XM_005387443;XM_013515701;XM_013515702 XP_005387495;XP_005387496;XP_005387497;XP_005387498;XP_005387499;XP_005387500;XP_013371155;XP_013371156 MODEL 39133798 misc_rna 7SK 7SK RNA 9021213 protein-coding Ankrd40 ankyrin repeat domain 40 ASSOCIATED WITH colon adenocarcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955451 11078839 11085303 + 102010763 AGCD01043342;GBDI01172269;GBDK01132584;XM_013519433;XM_013519434 XP_013374887;XP_013374888 MODEL 8789109 pseudo LOC102004207 crooked neck-like protein 1 NW_004955442 6826753 6831353 - 102004207 AGCD01037599 MODEL 9001610 protein-coding Casz1 castor zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of amacrine cell differentiation (ortholog); negative regulation of cell differentiation (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) NW_004955486 2923239 2975835 + 102014052 AGCD01059013;GBBH01003788;GBDK01282114;XM_013504268;XM_013504270 XP_013359722;XP_013359724 MODEL 8982471 protein-coding Col4a2 collagen type IV alpha 2 chain ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); DNA-templated transcription (ortholog); ASSOCIATED WITH arthritis (ortholog); atherosclerosis (ortholog); autistic disorder (ortholog); FOUND IN basement membrane; collagen type IV trimer (ortholog) NW_004955404 2092184 2178079 - 102015278 AGCD01003250;GBCB01002326;XM_013516801 XP_013372255 MODEL 8713605 protein-coding Ebna1bp2 EBNA1 binding protein 2 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955537 2792295 2800249 - 102020955 AGCD01070938;GBCE01095072;XM_005410632 XP_005410689 MODEL 8990354 protein-coding Ift38 intraflagellar transport 38 INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); floor plate formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); ciliary tip (ortholog) NW_004955442 13843952 13890082 - 102023202 AGCD01037793;AGCD01037794;AGCD01037795;GBDK01004619;XM_005391336;XM_005391337;XM_005391338;XM_005391339;XM_005391340 XP_005391393;XP_005391394;XP_005391395;XP_005391396;XP_005391397 MODEL 8884037 protein-coding Ermard ER membrane associated RNA degradation ASSOCIATED WITH periventricular nodular heterotopia (ortholog); periventricular nodular heterotopia 6 (ortholog) NW_004955411 3838125 3866282 - 102018814 AGCD01011556;GBDK01058947;XM_005377629;XM_005377630;XM_005377631;XM_005377632;XM_005377633;XM_005377634;XM_013510740;XM_013510742 XP_005377686;XP_005377687;XP_005377688;XP_005377689;XP_005377690;XP_005377691;XP_013366194;XP_013366196 MODEL 9020113 pseudo LOC102017715 sialic acid-binding Ig-like lectin 13 NW_004955558 1206318 1210776 - 102017715 AGCD01073422 MODEL 9031747 protein-coding Chaf1a chromatin assembly factor 1 subunit A ENCODES a protein that exhibits chromo shadow domain binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colon cancer (ortholog); FOUND IN CAF-1 complex (ortholog); chromatin (ortholog); nucleoplasm (ortholog) NW_004955495 4467317 4499419 - 102008121 AGCD01061924;AGCD01061925;AGCD01061926;GBDI01384930;XM_005405794;XM_013505362;XM_013505363;XM_013505364 XP_005405851;XP_013360816;XP_013360817;XP_013360818 MODEL 8803581 protein-coding LOC102011614 translation initiation factor IF-2-like NW_004955451 13182675 13184330 - 102011614 AGCD01043458;GBDK01206490;XM_005394257;XR_001235982 XP_005394314 MODEL 39134065 misc_rna 7SK 7SK RNA 39134366 misc_rna 7SK 7SK RNA 8908636 protein-coding Cimip4 ciliary microtubule inner protein 4 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955413 23508531 23525964 - 102024988 AGCD01014332;GBDF01006505;XM_005379177;XM_005379178;XM_013511576;XM_013511577;XM_013511578;XM_013511579 XP_005379234;XP_005379235;XP_013367030;XP_013367031;XP_013367032;XP_013367033 MODEL 8968151 protein-coding LOC102009291 uncharacterized LOC102009291 NW_004955495 1844763 1851588 - 102009291 AGCD01061735;GBBH01140669;XM_005405612;XM_005405613;XM_005405614;XM_013505148 XP_005405669;XP_005405670;XP_005405671;XP_013360602 MODEL 8881977 protein-coding LOC102011202 circumsporozoite protein-like NW_004955478 6863782 6864540 - 102011202 AGCD01055921;AGCD01055922;XM_005402156;XM_013503235;XM_013503236;XM_013503237 XP_005402213;XP_013358689;XP_013358690;XP_013358691 MODEL 8775499 protein-coding Grb7 growth factor receptor bound protein 7 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); positive regulation of cell migration (ortholog); stress granule assembly (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH adenocarcinoma (ortholog); Breast Neoplasms (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955451 14463032 14470392 + 102030589 AGCD01043555;GBCQ01005848;XM_013519238;XM_013519239;XM_013519240 XP_013374692;XP_013374693;XP_013374694 MODEL 8867808 ncrna LOC102003849 uncharacterized LOC102003849 NW_004955412 914841 917029 + 102003849 AGCD01012505;GBDK01170246;XR_259961 MODEL 8905709 ncrna LOC102007052 uncharacterized LOC102007052 NW_004955436 7964613 7966777 - 102007052 AGCD01033721;GBDF01079769;XR_261769 MODEL 8927708 protein-coding Gdpgp1 GDP-D-glucose phosphorylase 1 ENCODES a protein that exhibits GDP-D-glucose phosphorylase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); response to stress (ortholog) NW_004955416 15098922 15102499 - 102021439 AGCD01017300;GBDF01188866;XM_005381528 XP_005381585 MODEL 8868865 protein-coding Il7 interleukin 7 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN bone resorption (ortholog); cellular response to hypoxia (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955444 2365077 2400953 + 102013224 AGCD01038758;AGCD01038759;AGCD01038760;AGCD01038761;GBCE01057367;GBDK01360525;XM_013518182 XP_013373636 MODEL 8905044 pseudo LOC102010427 signal recognition particle subunit SRP72-like NW_004955569 166179 187432 - 102010427 AGCD01074565;AGCD01074566 MODEL 8872805 pseudo LOC102008185 ATP-dependent RNA helicase DDX3X-like NW_004955407 21081761 21090500 + 102008185 AGCD01007350 MODEL 8724298 protein-coding Ccdc51 coiled-coil domain containing 51 ENCODES a protein that exhibits mitochondrial ATP-gated potassium channel activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); mitochondrial potassium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial ATP-gated potassium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955532 500963 509437 - 102025164 AGCD01070127;GBDK01397852;XM_005410149;XM_005410150;XM_013507608 XP_005410206;XP_005410207;XP_013363062 MODEL 8961076 protein-coding Cluh CLUH binding protein of NUMT mRNA ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN intracellular distribution of mitochondria (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955481 583554 606566 + 102005376 AGCD01056798;GBDF01161845;XM_005402573;XM_005402574;XM_005402576;XM_013503512;XM_013503513;XM_013503514 XP_005402630;XP_005402631;XP_005402633;XP_013358966;XP_013358967;XP_013358968 MODEL 8741213 protein-coding Acap3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN neuron migration (ortholog); regulation of neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN growth cone (ortholog) NW_004955486 9495087 9508047 + 102025015 AGCD01059188;GBBH01228029;XM_005404234;XM_005404235;XM_013504190 XP_005404291;XP_005404292;XP_013359644 MODEL 8822491 ncrna LOC102008554 uncharacterized LOC102008554 NW_004955425 10486431 10493561 + 102008554 AGCD01025446;GBDF01209722;XR_261137 MODEL 8799422 protein-coding Alg3 ALG3 alpha-1,3- mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Id (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955420 23236686 23241936 + 102024119 AGCD01021237;GBDF01227510;XM_005383337 XP_005383394 MODEL 8722505 protein-coding Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ionotropic glutamate receptor binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN positive regulation of AMPA receptor activity (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); Breast Cancer, Familial (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell body (ortholog); cell surface (ortholog) NW_004955478 6219637 6278759 + 102008410 AGCD01055890;AGCD01055891;GBDF01128850;XM_005402149 XP_005402206 MODEL 8851001 protein-coding Fbxw9 F-box and WD repeat domain containing 9 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955415 31788115 31794174 - 102019593 AGCD01016697;GBCQ01067320;XM_005381020 XP_005381077 MODEL 8810551 protein-coding Jak3 Janus kinase 3 ENCODES a protein that exhibits protein phosphatase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN altered Jak-Stat signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955524 3399895 3412018 + 102015758 AGCD01068894;AGCD01068895;GBDK01109947;XM_005409547 XP_005409604 MODEL 8931473 protein-coding Apoh apolipoprotein H ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); lipid binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); blood coagulation, intrinsic pathway (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH antiphospholipid syndrome (ortholog); arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular region (ortholog) NW_004955478 5612258 5626061 - 102007763 AGCD01055880;GBDJ01386248;XM_005402147 XP_005402204 MODEL 8813315 protein-coding Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activity (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein import into nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955491 5546097 5573866 + 102004939 AGCD01060489;AGCD01060490;GBBH01092057;GBCE01032301;XM_013504620 XP_013360074 MODEL 8851476 protein-coding Hspa4l heat shock protein family A (Hsp70) member 4 like ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN protein folding (ortholog); response to unfolded protein (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955428 13589532 13644079 - 102006692 AGCD01027959;AGCD01027960;GBDK01080191;XM_005386743;XM_005386747;XM_013515311 XP_005386800;XP_005386804;XP_013370765 MODEL 39133799 misc_rna 7SK 7SK RNA 8705121 protein-coding LOC102012823 inositol-3-phosphate synthase 1-like NW_004958180 30 610 + 102012823 AGCD01081576;GBBH01061916;XM_005415238 XP_005415295 MODEL 8999214 protein-coding Ankrd42 ankyrin repeat domain 42 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleus (ortholog) NW_004955414 9351512 9395937 - 102026206 AGCD01015019;AGCD01015020;AGCD01015021;GBDF01086583;XM_005379798;XM_005379800;XM_013511792;XM_013511793;XM_013511794 XP_005379855;XP_005379857;XP_013367246;XP_013367247;XP_013367248 MODEL 8989125 protein-coding LOC102009665 antileukoproteinase NW_004955445 12093023 12095345 + 102009665 AGCD01039735;GBDI01080100;XM_013518386 XP_013373840 MODEL 8734106 ncrna LOC102006691 uncharacterized LOC102006691 NW_004955506 1675374 1677648 - 102006691 AGCD01065272;GBDI01279025;XR_264324 MODEL 39132062 rrna 5S_rRNA 5S ribosomal RNA 9055475 protein-coding Eif2b4 eukaryotic translation initiation factor 2B subunit delta ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); myelination (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Leukoencephalopathies (ortholog); leukoencephalopathy with vanishing white matter (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955469 9328900 9334463 - 102030410 AGCD01052498;GBBH01089100;XM_005400493;XM_005400495;XM_005400497 XP_005400550;XP_005400552;XP_005400554 MODEL 8922983 protein-coding Cat catalase ENCODES a protein that exhibits aminoacylase activity (ortholog); antioxidant activity (ortholog); catalase activity (ortholog); INVOLVED IN response to auditory stimulus; aerobic respiration (ortholog); cellular detoxification of hydrogen peroxide (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; tryptophan metabolic pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acatalasia (ortholog); acne (ortholog); FOUND IN catalase complex (ortholog); extracellular region (ortholog); peroxisomal matrix (ortholog) NW_004955422 11783973 11826970 - 102017674 AGCD01022765;AGCD01022766;AGCD01022767;AGCD01022768;GBDI01005261;XM_005384146 XP_005384203 MODEL 39131868 rrna 5S_rRNA 5S ribosomal RNA 8851291 protein-coding Ebp EBP cholestenol delta-isomerase ENCODES a protein that exhibits C-8 sterol isomerase activity (ortholog); cholestenol delta-isomerase activity (ortholog); cholesterol-5,6-oxide hydrolase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol metabolic process (ortholog); hemopoiesis (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical dystonia (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955543 92553 98370 + 102019534 AGCD01071557;GBCE01066044;XM_005411260 XP_005411317 MODEL 8847213 protein-coding Kcnk13 potassium two pore domain channel subfamily K member 13 ENCODES a protein that exhibits identical protein binding (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN regulation of excitatory synapse pruning (ortholog); regulation of NLRP3 inflammasome complex assembly (ortholog); regulation of resting membrane potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955438 12522063 12660078 + 102012362 AGCD01035260;AGCD01035261;AGCD01035262;AGCD01035263;AGCD01035264;AGCD01035265;GBDF01224037;XM_005390280 XP_005390337 MODEL 39134066 misc_rna 7SK 7SK RNA 39134367 misc_rna 7SK 7SK RNA 8778156 protein-coding LOC102005607 uncharacterized protein C7orf34 homolog NW_004955494 875367 876635 + 102005607 AGCD01061387;GBDF01006174;XM_005405389;XM_005405390 XP_005405446;XP_005405447 MODEL 9008503 protein-coding Atp6v1c2 ATPase H+ transporting V1 subunit C2 ENCODES a protein that exhibits identical protein binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955487 5711235 5735081 + 102003031 AGCD01059343;AGCD01059344;AGCD01059345;GBCQ01073152;XM_005404415;XM_005404416;XM_013504367;XM_013504368;XM_013504369;XM_013504370;XM_013504371;XM_013504372 XP_005404472;XP_005404473;XP_013359821;XP_013359822;XP_013359823;XP_013359824;XP_013359825;XP_013359826 MODEL 8917995 protein-coding LOC102004559 chromosome unknown open reading frame, human C12orf43 ASSOCIATED WITH hepatocellular carcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleolus (ortholog) NW_004955455 10684757 10693511 + 102004559 AGCD01045961;GBDF01224343;XM_005396486;XM_005396487;XM_005396488;XM_005396489 XP_005396543;XP_005396544;XP_005396545;XP_005396546 MODEL 8903132 protein-coding LOC102021800 disintegrin and metalloproteinase domain-containing protein 18-like NW_004955536 3675217 3758163 + 102021800 AGCD01070831;AGCD01070832;AGCD01070833;AGCD01070834;GBDF01001976;XM_005410550;XM_013507715;XM_013507716 XP_005410607;XP_013363169;XP_013363170 MODEL 9007485 protein-coding Cdh22 cadherin 22 INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955445 11084448 11151871 + 102029338 AGCD01039682;AGCD01039683;GBBH01087748;XM_005392577 XP_005392634 MODEL 8827924 protein-coding Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif 18 INVOLVED IN eye development (ortholog); negative regulation of platelet aggregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); astigmatism (ortholog) NW_004955522 530752 666752 - 102006602 AGCD01068347;AGCD01068348;AGCD01068349;GBCE01042223;GBCQ01172399;XM_013507112 XP_013362566 MODEL 8788903 protein-coding Cep135 centrosomal protein 135 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN centriole replication (ortholog); centriole-centriole cohesion (ortholog); positive regulation of establishment of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955447 14934334 15004077 - 102029021 AGCD01041027;AGCD01041028;AGCD01041029;GBBH01137494;GBBH01182158;XM_013518555;XM_013518556;XM_013518557;XM_013518558;XM_013518559 XP_013374009;XP_013374010;XP_013374011;XP_013374012;XP_013374013 MODEL 8947356 protein-coding LOC102003850 putative vomeronasal receptor-like protein 4 NW_004955465 12732451 12749417 - 102003850 AGCD01050556;AGCD01050557;AGCD01050558;GBDF01114303;XM_005398941;XM_013521802;XM_013521803;XM_013521804;XM_013521805 XP_005398998;XP_013377256;XP_013377257;XP_013377258;XP_013377259 MODEL 8786173 protein-coding Btf3 basic transcription factor 3 INVOLVED IN in utero embryonic development (ortholog); negative regulation of protein localization to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nascent polypeptide-associated complex (ortholog) NW_004955425 27099207 27105644 - 102007789 AGCD01025960;GBDF01008196;XM_005386072;XM_005386073 XP_005386129;XP_005386130 MODEL 8923130 protein-coding Gem GTP binding protein overexpressed in skeletal muscle ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN chromosome organization (ortholog); metaphase chromosome alignment (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); glaucoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); midbody (ortholog); mitotic spindle (ortholog) NW_004955417 10475967 10486879 - 102024564 AGCD01018071;GBCE01034424;GBDI01358204;XM_013512843 XP_013368297 MODEL 8789252 protein-coding LOC102010431 olfactory receptor 13H1-like NW_004955580 1266092 1267030 - 102010431 AGCD01075652;XM_005414225 XP_005414282 MODEL 8752924 protein-coding Il7r interleukin 7 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-7 receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); cell morphogenesis (ortholog); cellular homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955426 20785896 20818512 + 102009522 AGCD01026575;GBDF01110704;XM_005386201;XM_005386202;XM_013515007;XM_013515008 XP_005386258;XP_005386259;XP_013370461;XP_013370462 MODEL 39133930 misc_rna 7SK 7SK RNA 8738003 ncrna LOC102008558 uncharacterized LOC102008558 NW_004955430 15103778 15104993 + 102008558 AGCD01029588;GBDF01089462;XR_261428 MODEL 8760239 protein-coding Ift43 intraflagellar transport 43 INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); brachydactyly (ortholog); FOUND IN centriole (ortholog); cilium (ortholog); intercellular bridge (ortholog) NW_004955438 58503 144675 + 102027232 AGCD01034940;AGCD01034941;GBBH01062070;XM_005390147 XP_005390204 MODEL 8872991 protein-coding Ermn ermin ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); morphogenesis of a branching structure (ortholog); regulation of cell projection organization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); filopodium (ortholog) NW_004955449 16056735 16064734 + 102017079 AGCD01042208;GBDK01341423;XM_005393411 XP_005393468 MODEL 8777040 pseudo LOC102011616 transcription termination factor 2 pseudogene NW_004955403 54518608 54521373 - 102011616 AGCD01003099 MODEL 8835000 protein-coding Eno1 enolase 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); GTPase binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955486 4275371 4287152 + 102025912 AGCD01059057;GBDF01006171;XM_005404048;XM_005404051 XP_005404105;XP_005404108 MODEL 8800582 protein-coding Chaf1b chromatin assembly factor 1 subunit B INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN CAF-1 complex (ortholog); chromatin (ortholog); nucleoplasm (ortholog) NW_004955407 35601992 35618287 + 102011083 AGCD01007749;GBCB01094059;XM_005375738;XM_005375739 XP_005375795;XP_005375796 MODEL 10099518 protein-coding LOC106149947 inner nuclear membrane protein Man1-like NW_004955458 11883317 11883667 + 106149947 AGCD01047762;GBDF01076502;XM_013520809 XP_013376263 MODEL 8958354 protein-coding Trit1 tRNA isopentenyltransferase 1 ENCODES a protein that exhibits tRNA dimethylallyltransferase activity (ortholog); INVOLVED IN mitochondrial tRNA modification (ortholog); tRNA modification (ortholog); ASSOCIATED WITH capillary hemangioma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955452 17330446 17378579 - 102029821 AGCD01044550;AGCD01044551;AGCD01044552;GBDK01277036;XM_005395267;XM_005395268;XM_013519693 XP_005395324;XP_005395325;XP_013375147 MODEL 8916035 pseudo LOC102011203 multifunctional protein ADE2 pseudogene NW_004955481 3893416 3894341 + 102011203 AGCD01056921;XR_263775 MODEL 8738028 ncrna LOC102009292 uncharacterized LOC102009292 NW_004955423 372935 383250 + 102009292 AGCD01023411;GBDI01297765;XR_260937 MODEL 8970688 protein-coding Greb1 growth regulating estrogen receptor binding 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955487 6032774 6112715 + 102006583 AGCD01059353;AGCD01059354;AGCD01059355;GBDF01111413;XM_005404427;XM_013504384;XM_013504385;XM_013504386;XM_013504387;XM_013504388;XM_013504389;XM_013504390;XM_013504391;XM_013504392;XM_013504393;XM_013504394 XP_005404484;XP_013359838;XP_013359839;XP_013359840;XP_013359841;XP_013359842;XP_013359843;XP_013359844;XP_013359845;XP_013359846;XP_013359847;XP_013359848 MODEL 8796653 protein-coding LOC102004209 uncharacterized LOC102004209 NW_004955444 19152362 19215916 - 102004209 AGCD01039271;AGCD01039272;AGCD01039273;AGCD01039274;XM_005392186 XP_005392243 MODEL 8880958 protein-coding Apold1 apolipoprotein L domain containing 1 INVOLVED IN angiogenesis (ortholog); autophagosome-dependent secretion (ortholog); endothelial cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bleeding Disorder, Vascular-Type (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); nucleoplasm (ortholog) NW_004955413 9682032 9685965 + 102029385 AGCD01013909;AGCD01013910;GBBH01192964;XM_005379640 XP_005379697 MODEL 8783455 protein-coding Col4a3 collagen type IV alpha 3 chain ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); endothelial cell apoptotic process (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Alport syndrome (ortholog); Alport syndrome 2 (ortholog); Alport syndrome 3A (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) NW_004955453 7261278 7351414 - 102010021 AGCD01044741;AGCD01044742;GBDK01083012;XM_005395714 XP_005395771 MODEL 8908952 protein-coding Ccdc54 coiled-coil domain containing 54 NW_004955427 8082515 8083798 + 102010389 AGCD01027063;GBDF01046712;XM_005386345 XP_005386402 MODEL 8763308 protein-coding Ccz1 CCZ1 vacuolar protein trafficking and biogenesis associated ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN late endosome (ortholog); Mon1-Ccz1 complex (ortholog) NW_004955460 13842679 13867750 - 102026406 AGCD01048726;AGCD01048727;GBDF01193667;XM_005397906;XM_005397907;XM_013521164 XP_005397963;XP_005397964;XP_013376618 MODEL 8702485 protein-coding Hspa5 heat shock protein family A (Hsp70) member 5 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to antibiotic (ortholog); cellular response to calcium ion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); asbestosis (ortholog); FOUND IN cell surface (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955419 3055420 3060208 + 102015520 AGCD01019701;GBDF01006448;XM_005382466 XP_005382523 MODEL 8974163 pseudo LOC102017725 prefoldin subunit 6 pseudogene NW_004955592 408866 409682 - 102017725 AGCD01076312 MODEL 39132063 rrna 5S_rRNA 5S ribosomal RNA 8913038 protein-coding Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN astrocyte development (ortholog); astrocyte differentiation (ortholog); cytoplasmic translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955420 23313405 23322748 - 102027533 AGCD01021242;GBCQ01099142;XM_005383350 XP_005383407 MODEL 8850381 protein-coding Alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase ENCODES a protein that exhibits dolichyl-phosphate beta-glucosyltransferase activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955431 9059074 9097597 + 102026779 AGCD01030155;AGCD01030156;GBCE01170368;XM_005387674;XM_013515813 XP_005387731;XP_013371267 MODEL 8793874 protein-coding Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 INVOLVED IN regulation of AMPA receptor activity (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955478 6110440 6152677 + 102008097 AGCD01055888;AGCD01055889;GBDK01217001;XM_005402148 XP_005402205 MODEL 8991803 protein-coding Jakmip1 janus kinase and microtubule interacting protein 1 ENCODES a protein that exhibits GABA receptor binding (ortholog); kinesin binding (ortholog); RNA binding (ortholog); INVOLVED IN cognition (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN membrane (ortholog); microtubule cytoskeleton (ortholog); ribonucleoprotein complex (ortholog) NW_004955514 3987231 4088762 + 102020598 AGCD01067123;AGCD01067124;AGCD01067125;AGCD01067126;AGCD01067127;XM_013506849;XM_013506850;XM_013506851 XP_013362303;XP_013362304;XP_013362305 MODEL 9021890 pseudo LOC102007053 protein kinase C iota type pseudogene NW_004955530 521029 523694 + 102007053 AGCD01069854;XM_005410110 MODEL 8923645 protein-coding Dio3 iodothyronine deiodinase 3 ENCODES a protein that exhibits thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); brown fat cell proliferation (ortholog); positive regulation of multicellular organism growth (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog) NW_004955538 1042949 1045038 + 102022013 AGCD01071043;GBCE01078884;XM_005415334 XP_005415391 MODEL 8877072 protein-coding LOC102008186 gamma-crystallin B NW_004955457 6977737 6979696 + 102008186 AGCD01046862;XM_005396970 XP_005397027 MODEL 9035886 protein-coding LOC102003851 olfactory receptor 150-like NW_004955412 24925251 24928447 + 102003851 AGCD01013131;XM_005378411 XP_005378468 MODEL 8762189 protein-coding LOC102012824 cytochrome c oxidase subunit 6B1-like NW_004955452 216986 217314 - 102012824 AGCD01043804;XM_005394661 XP_005394718 MODEL 9058472 protein-coding LOC102006693 cytochrome P450 2C26-like NW_004955507 1438970 1475012 + 102006693 AGCD01065558;AGCD01065559;AGCD01065560;AGCD01065561;GBDJ01058629;XM_013506234 XP_013361688 MODEL 8973920 protein-coding LOC102009673 E3 ubiquitin-protein ligase UHRF1 NW_004955777 1489 17093 + 102009673 AGCD01078327;GBDF01156556;GBDF01156558;XM_005415110 XP_005415167 MODEL 8926719 protein-coding Agbl1 AGBL carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Corneal Dystrophy, Fuchs Endothelial, 8 (ortholog) NW_004955416 17885757 18686124 - 102011442 AGCD01017393;AGCD01017394;AGCD01017395;AGCD01017396;AGCD01017397;AGCD01017398;AGCD01017399;AGCD01017400;AGCD01017401;AGCD01017402;AGCD01017403;AGCD01017404;AGCD01017405;AGCD01017406;AGCD01017407;AGCD01017408;AGCD01017409;AGCD01017410;GBDI01046647;XM_005381584;XM_005381585;XM_013512654 XP_005381641;XP_005381642;XP_013368108 MODEL 8893488 protein-coding Catip ciliogenesis associated TTC17 interacting protein INVOLVED IN actin filament polymerization (ortholog); cilium organization (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); spermatogenic failure 54 (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955453 15008225 15015030 - 102011837 AGCD01044880;GBBH01031850;XM_005395652 XP_005395709 MODEL 8714095 protein-coding Ebpl EBP like ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955431 3114160 3122448 - 102012014 AGCD01029949;GBDK01284622;XM_005387891 XP_005387948 MODEL 8898079 pseudo LOC102011619 60S ribosomal protein L6-like NW_004955405 15379752 15381035 + 102011619 AGCD01004944 MODEL 8965813 ncrna Linc02915 long intergenic non-protein coding RNA 2915 NW_004955416 6178585 6178974 + 102005140 AGCD01016933;XM_005415397 XP_005415454 MODEL 39134067 misc_rna 7SK 7SK RNA 8912907 protein-coding Kcnk15 potassium two pore domain channel subfamily K member 15 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog) NW_004955445 12604456 12610502 - 102016324 AGCD01039759;GBCE01185289;XM_005392465 XP_005392522 MODEL 9038065 protein-coding LOC102005611 bcl-2-like protein 13 NW_004955423 25019836 25046086 + 102005611 AGCD01024050;AGCD01024051;XM_013514366 XP_013369820 MODEL 8747432 pseudo LOC102004564 abl interactor 1 pseudogene NW_004955407 18718421 18719424 + 102004564 AGCD01007275 MODEL 8753593 protein-coding Atp6v1d ATPase H+ transporting V1 subunit D ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cilium assembly (ortholog); positive regulation of TORC1 signaling (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955466 2855597 2869319 + 102017643 AGCD01050769;GBDF01001216;XM_005399088;XM_005399089 XP_005399145;XP_005399146 MODEL 8738284 protein-coding Cdh23 cadherin related 23 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transport (ortholog); cochlea development (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN apical part of cell (ortholog); centrosome (ortholog); cochlear hair cell ribbon synapse (ortholog) NW_004955437 19683792 20044718 - 102005634 AGCD01034865;AGCD01034866;AGCD01034867;GBDF01143876;GBDK01283597;XM_005390028;XM_005390029;XM_005390030;XM_013516827;XM_013516828;XM_013516829;XM_013516830 XP_005390085;XP_005390086;XP_005390087;XP_013372281;XP_013372282;XP_013372283;XP_013372284 MODEL 9058534 protein-coding Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif 19 INVOLVED IN aortic valve morphogenesis (ortholog); collagen fibril organization (ortholog); mitral valve morphogenesis (ortholog); ASSOCIATED WITH aortic valve disease (ortholog); bicuspid aortic valve disease (ortholog); CARDIAC VALVULAR DYSPLASIA 2 (ortholog) NW_004955415 2384530 2617454 + 102008401 AGCD01015904;AGCD01015905;AGCD01015906;AGCD01015907;GBCB01066284;XM_005380553;XM_005380554;XM_005380555 XP_005380610;XP_005380611;XP_005380612 MODEL 8833270 protein-coding LOC102021806 kallikrein-13 NW_004955558 1399746 1434873 + 102021806 AGCD01073442;AGCD01073443;AGCD01073444;GBCQ01148135;XM_005412713;XM_005412715;XM_013508921;XM_013508922;XM_013508923 XP_005412770;XP_005412772;XP_013364375;XP_013364376;XP_013364377 MODEL 9031999 protein-coding Clul1 clusterin like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog) NW_004955402 9312643 9361358 - 102023757 AGCD01000213;GBDF01192451;XM_005372675;XM_005372676;XM_005372677;XM_005372679;XM_005372680 XP_005372732;XP_005372733;XP_005372734;XP_005372736;XP_005372737 MODEL 10090462 protein-coding A1bg alpha-1-B glycoprotein INVOLVED IN growth hormone receptor signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hepatomegaly (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955584 1025588 1028459 - 106147574 AGCD01075973;AGCD01075974;XM_013509849 XP_013365303 MODEL 8801345 protein-coding Ankrd44 ankyrin repeat domain 44 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955403 3228360 3476988 + 102015909 AGCD01001759;AGCD01001760;AGCD01001761;AGCD01001762;AGCD01001763;AGCD01001764;AGCD01001765;AGCD01001766;GBDK01056004;XM_005373269;XM_005373270;XM_013512075;XM_013512078;XM_013512080;XM_013512083;XM_013512086;XM_013512090;XM_013512095;XM_013512098;XM_013512100 XP_005373326;XP_005373327;XP_013367529;XP_013367532;XP_013367534;XP_013367537;XP_013367540;XP_013367544;XP_013367549;XP_013367552;XP_013367554 MODEL 8752348 ncrna LOC102010432 uncharacterized LOC102010432 NW_004955449 7929705 7955196 - 102010432 AGCD01042005;XR_262495 MODEL 8905879 protein-coding Il9 interleukin 9 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-9 receptor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Airway Obstruction (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 30950816 30953571 - 102012504 AGCD01008818;GBDF01218996;XM_005376487 XP_005376544 MODEL 8921979 protein-coding Btf3l4 basic transcription factor 3 like 4 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955464 7044634 7069593 - 102022796 AGCD01050053;GBCE01116828;XM_005398593;XM_005398594;XM_005398595 XP_005398650;XP_005398651;XP_005398652 MODEL 39131870 rrna 5S_rRNA 5S ribosomal RNA 8827143 protein-coding Cd101 CD101 molecule INVOLVED IN glucose metabolic process (ortholog); immune response (ortholog); myeloid cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955435 20104391 20145440 + 102005630 AGCD01033445;AGCD01033446;AGCD01033447;GBBH01131151;XM_005389048;XM_013516564 XP_005389105;XP_013372018 MODEL 39133931 misc_rna 7SK 7SK RNA 39132064 rrna 5S_rRNA 5S ribosomal RNA 8769677 protein-coding Ift46 intraflagellar transport 46 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955412 19697995 19710965 - 102012175 AGCD01012969;AGCD01012970;AGCD01012971;GBDF01049816;XM_005378250 XP_005378307 MODEL 8846577 protein-coding Gemin2 gem nuclear organelle associated protein 2 INVOLVED IN protein-containing complex assembly (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Prostate Cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) NW_004955409 22142082 22153699 - 102016352 AGCD01010021;AGCD01010022;GBDK01323617;GBDK01323624;XM_013510473;XM_013510474 XP_013365927;XP_013365928 MODEL 8802108 protein-coding Ermp1 endoplasmic reticulum metallopeptidase 1 INVOLVED IN cellular response to oxidative stress (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic kidney disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955434 9772667 9825048 - 102012355 AGCD01032309;AGCD01032310;GBDF01156541;XM_013516296 XP_013371750 MODEL 39134368 misc_rna 7SK 7SK RNA 8943620 protein-coding Eno2 enolase 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); phosphopyruvate hydratase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); multicellular organismal reproductive process (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Atrophy (ortholog); brain disease (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955413 4498625 4506769 + 102006232 AGCD01013620;GBBH01088486;GBDF01119626;XM_005378839 XP_005378896 MODEL 9052015 ncrna LOC102011204 uncharacterized LOC102011204 NW_004955418 503166 505034 - 102011204 AGCD01018678;GBDF01041809;XR_260531 MODEL 9059477 protein-coding Trmo tRNA methyltransferase O ENCODES a protein that exhibits tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955419 27553040 27568417 + 102020012 AGCD01020441;GBCQ01059248;XM_013513222;XM_013513223 XP_013368676;XP_013368677 MODEL 8929971 pseudo LOC102009294 volume-regulated anion channel subunit LRRC8D-like NW_004955497 504156 510636 - 102009294 AGCD01062420;AGCD01062421 MODEL 8822371 protein-coding LOC102004210 uncharacterized LOC102004210 NW_004955445 12207949 12220949 + 102004210 AGCD01039744;AGCD01039745;XM_013518243 XP_013373697 MODEL 8713511 protein-coding Greb1l GREB1 like retinoic acid receptor coactivator INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cardiac muscle cell differentiation (ortholog); cardiac ventricle development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness 80 (ortholog); branchiootic syndrome (ortholog) NW_004955402 9865934 10204990 + 102018548 AGCD01000233;AGCD01000234;AGCD01000235;AGCD01000236;AGCD01000237;AGCD01000238;AGCD01000239;AGCD01000240;AGCD01000241;AGCD01000242;AGCD01000243;AGCD01000244;AGCD01000245;AGCD01000246;AGCD01000247;AGCD01000248;AGCD01000249;AGCD01000250;AGCD01000251;AGCD01000252;GBDF01250435;XM_013503842 XP_013359296 MODEL 8752368 protein-coding Col4a4 collagen type IV alpha 4 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); molecular adaptor activity (ortholog); INVOLVED IN glomerular basement membrane development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acanthocytosis (ortholog); acute myeloid leukemia (ortholog); Alport syndrome (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) NW_004955453 7405167 7524038 + 102012605 AGCD01044744;AGCD01044745;AGCD01044746;AGCD01044747;GBDK01140864;XM_013519818 XP_013375272 MODEL 8990949 protein-coding Ccdc57 coiled-coil domain containing 57 INVOLVED IN axoneme assembly (ortholog); centriole replication (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955506 954473 1060703 + 102014693 AGCD01065242;GBCE01129993;XM_013506055;XM_013506056;XM_013506057;XM_013506058 XP_013361509;XP_013361510;XP_013361511;XP_013361512 MODEL 39131496 protein-coding HSPA6 heat shock protein family A (Hsp70) member 6 8736224 protein-coding Acat1 acetyl-CoA acetyltransferase 1 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); C-acetyltransferase activity (ortholog); cholesterol O-acyltransferase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA catabolic process (ortholog); adipose tissue development (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; ASSOCIATED WITH arteriosclerosis (ortholog); beta-ketothiolase deficiency (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955412 10350088 10369806 + 102004581 AGCD01012766;AGCD01012767;GBCB01044709;XM_005378034 XP_005378091 MODEL 8707197 protein-coding LOC102008559 olfactory receptor 1440-like NW_004955511 3846306 3866765 - 102008559 AGCD01066478;AGCD01066479;XM_013506388 XP_013361842 MODEL 8794256 protein-coding Eif2d eukaryotic translation initiation factor 2D ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955406 42163508 42181482 - 102020307 AGCD01006697;GBDK01278150;XM_005375397;XM_013523095 XP_005375454;XP_013378549 MODEL 9018333 protein-coding Champ1 chromosome alignment maintaining phosphoprotein 1 INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); protein localization to kinetochore (ortholog); protein localization to microtubule (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); allergic disease (ortholog); FOUND IN condensed chromosome (ortholog); kinetochore (ortholog); nuclear body (ortholog) NW_004955404 3228 14695 - 102025204 AGCD01003193;GBCQ01154957;XM_005373921;XM_013515422 XP_005373978;XP_013370876 MODEL 9027259 pseudo LOC102011620 60S ribosomal protein L27 pseudogene NW_004955452 12777543 12777937 - 102011620 AGCD01044365 MODEL 9013463 protein-coding Cacng6 calcium voltage-gated channel auxiliary subunit gamma 6 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog) NW_004955604 189261 205058 - 102016771 AGCD01076867;AGCD01076868;GBCB01007536;XM_005414869 XP_005414926 MODEL 8832890 protein-coding Alg6 ALG6 alpha-1,3-glucosyltransferase ENCODES a protein that exhibits dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955423 26569824 26592857 - 102007569 AGCD01024097;AGCD01024098;GBBH01000138;GBDI01176676;XM_013514390 XP_013369844 MODEL 9053902 protein-coding Jakmip2 janus kinase and microtubule interacting protein 2 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955415 6431045 6593485 + 102027636 AGCD01016016;AGCD01016017;AGCD01016018;AGCD01016019;AGCD01016020;AGCD01016021;AGCD01016022;GBDF01185873;XM_005381120 XP_005381177 MODEL 8760721 protein-coding Kcnk18 potassium two pore domain channel subfamily K member 18 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to pH (ortholog); potassium ion export across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH migraine (ortholog); urinary bladder cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955431 21916587 21927346 + 102020041 AGCD01030506;XM_005387909 XP_005387966 MODEL 8762758 pseudo LOC102007056 protein CDV3 pseudogene NW_004955437 733515 734520 - 102007056 AGCD01034158 MODEL 9018453 protein-coding Apoltp apolipoprotein lipid transfer particle homolog NW_004955442 7126014 7171102 + 102029126 AGCD01037616;AGCD01037617;AGCD01037618;AGCD01037619;AGCD01037620;GBBH01101218;XM_013518020;XM_013518021;XM_013518022;XR_001235432;XR_001235433 XP_013373474;XP_013373475;XP_013373476 MODEL 8789782 protein-coding LOC102008188 core histone macro-H2A.1 ENCODES a protein that exhibits ADP-D-ribose binding (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA repair (ortholog); dosage compensation by inactivation of X chromosome (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); Hereditary Neoplastic Syndromes (ortholog); myelodysplastic syndrome (ortholog); FOUND IN Barr body (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955408 30497531 30550095 - 102008188 AGCD01008809;AGCD01008810;GBBH01000865;GBDK01090820;XM_005376471 XP_005376528 MODEL 8841062 protein-coding Dip2a disco interacting protein 2 homolog A ENCODES a protein that exhibits acetyl-CoA synthetase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); dendritic spine morphogenesis (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955407 42857297 42961831 + 102020638 AGCD01007898;AGCD01007899;AGCD01007900;AGCD01007901;AGCD01007902;GBBH01057166;GBCE01095801;XM_005375936 XP_005375993 MODEL 9007383 protein-coding LOC102021810 olfactory receptor 1052-like NW_004955568 988414 994736 - 102021810 AGCD01074533;AGCD01074534;XM_005413486 XP_005413543 MODEL 8996451 ncrna LOC102012834 uncharacterized LOC102012834 NW_004955409 11180475 11194137 + 102012834 AGCD01009500;AGCD01009501;GBBH01138314;XR_001232647;XR_001232648 MODEL 8795894 protein-coding Fcamr Fc alpha and mu receptor ENCODES a protein that exhibits IgA binding (ortholog); IgM binding (ortholog); transmembrane signaling receptor activity (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 42484811 42518714 - 102023978 AGCD01006708;AGCD01006709;AGCD01006710;AGCD01006711;GBDI01141073;XM_005375409;XM_013502773;XM_013502777;XM_013502781 XP_005375466;XP_013358227;XP_013358231;XP_013358235 MODEL 8778498 protein-coding LOC102017726 chromosome unknown open reading frame, human C20orf202 NW_004955596 429206 445151 + 102017726 AGCD01076517;AGCD01076518;AGCD01076519;XM_005414711 XP_005414768 MODEL 39131871 rrna 5S_rRNA 5S ribosomal RNA 8897077 protein-coding LOC102006694 olfactory receptor 13A1-like NW_004955507 6424542 6432509 + 102006694 AGCD01065716;XM_005407723 XP_005407780 MODEL 8910531 protein-coding Agbl3 AGBL carboxypeptidase 3 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN protein side chain deglutamylation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); lymphoma (ortholog) NW_004955494 7497964 7570137 - 102015734 AGCD01061553;GBCE01111503;XM_005405496;XM_013504930;XM_013504931;XM_013504932;XM_013504933;XM_013504934;XM_013504935;XM_013504936;XM_013504937;XM_013504938 XP_005405553;XP_013360384;XP_013360385;XP_013360386;XP_013360387;XP_013360388;XP_013360389;XP_013360390;XP_013360391;XP_013360392 MODEL 39133932 misc_rna 7SK 7SK RNA 8741787 protein-coding Catsper1 cation channel sperm associated 1 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); flagellated sperm motility (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH glycogen storage disease V (ortholog); ovarian serous cystadenocarcinoma (ortholog); spermatogenic failure 7 (ortholog); FOUND IN CatSper complex (ortholog); plasma membrane (ortholog); sperm flagellum (ortholog) NW_004955422 19315640 19322868 + 102020926 AGCD01022999;GBDF01119307;XM_005384434;XM_013514142;XM_013514143 XP_005384491;XP_013369596;XP_013369597 MODEL 8714296 protein-coding Ecd ecdysoneless cell cycle regulator ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); INVOLVED IN cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955437 18537726 18566870 + 102021706 AGCD01034800;AGCD01034801;AGCD01034802;AGCD01034803;GBDF01044847;XM_005389989 XP_005390046 MODEL 8843458 protein-coding Lingo1 leucine rich repeat and Ig domain containing 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); INVOLVED IN central nervous system neuron development (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 64 (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); presynapse (ortholog) NW_004955450 2435768 2493387 - 102023651 AGCD01042383;AGCD01042384;AGCD01042385;GBDI01366797;XM_005393495;XM_005393496;XM_005393497;XM_005393498;XM_013518819 XP_005393552;XP_005393553;XP_005393554;XP_005393555;XP_013374273 MODEL 39134068 misc_rna 7SK 7SK RNA 39134369 misc_rna 7SK 7SK RNA 8915463 pseudo LOC102011206 isochorismatase domain-containing protein 1 pseudogene NW_004955485 129742 131023 + 102011206 AGCD01058442;XM_005403914 MODEL 8883672 protein-coding LOC102005616 cytochrome P450 2C18-like NW_004955507 1041847 1146933 + 102005616 AGCD01065501;AGCD01065502;AGCD01065503;AGCD01065504;AGCD01065505;AGCD01065506;AGCD01065507;AGCD01065508;AGCD01065509;AGCD01065510;AGCD01065511;AGCD01065512;AGCD01065513;AGCD01065514;AGCD01065515;AGCD01065516;GBDF01111538;XM_013506232 XP_013361686 MODEL 8904678 protein-coding Cdh24 cadherin 24 ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog) NW_004955409 37249377 37257420 + 102020430 AGCD01010500;AGCD01010501;GBDF01308147;GBDF01308160;XM_013510445 XP_013365899 MODEL 8946775 protein-coding Atp6v1e1 ATPase H+ transporting V1 subunit E1 ENCODES a protein that exhibits ATPase binding (ortholog); guanyl nucleotide exchange factor activator activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); positive regulation of TORC1 signaling (ortholog); proton transmembrane transport (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IIC (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955454 5669883 5688623 - 102030382 AGCD01045180;AGCD01045181;GBDK01043238;XM_005395971 XP_005396028 MODEL 8946333 protein-coding Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif 2 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); lung development (ortholog); protein processing (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955408 1157826 1367146 + 102006981 AGCD01007952;AGCD01007953;AGCD01007954;AGCD01007955;GBBH01172277;XM_013507291 XP_013362745 MODEL 8969762 protein-coding Clvs1 clavesin 1 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN lysosome organization (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endosome (ortholog); trans-Golgi network (ortholog) NW_004955444 17319905 17515397 - 102027582 AGCD01039213;AGCD01039214;AGCD01039215;AGCD01039216;GBDJ01218136;XM_005392175 XP_005392232 MODEL 8876489 protein-coding LOC102010434 small proline-rich protein 3-like NW_004955592 374906 377181 - 102010434 AGCD01076311;GBDI01016407;XM_005414613;XM_005414614 XP_005414670;XP_005414671 MODEL 8866355 pseudo LOC102009680 60S ribosomal protein L13a pseudogene NW_004955452 571667 572274 - 102009680 AGCD01043817;AGCD01043818 MODEL 8930540 protein-coding Il9r interleukin 9 receptor ENCODES a protein that exhibits interleukin-9 binding (ortholog); interleukin-9 receptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955442 17115207 17128899 + 102010526 AGCD01037937;XM_013517828;XM_013517829 XP_013373282;XP_013373283 MODEL 8769283 protein-coding Btg1 BTG anti-proliferation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); disease of cellular proliferation (ortholog); multiple myeloma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955405 29206889 29209407 - 102021082 AGCD01005248;GBCB01021122;XM_005374452 XP_005374509 MODEL 8764888 protein-coding LOC102006696 olfactory receptor 1038-like NW_004955511 1584309 1585274 + 102006696 AGCD01066372;XM_005407966 XP_005408023 MODEL 8747534 protein-coding Cd109 CD109 molecule INVOLVED IN hair follicle development (ortholog); negative regulation of keratinocyte proliferation (ortholog); negative regulation of protein phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955488 9281407 9378354 - 102008423 AGCD01059755;AGCD01059756;AGCD01059757;AGCD01059758;AGCD01059759;AGCD01059760;AGCD01059761;AGCD01059762;AGCD01059763;AGCD01059764;AGCD01059765;GBDF01123507;GBDJ01129430;XM_013504426 XP_013359880 MODEL 8800620 pseudo LOC102011623 60S ribosomal protein L21 pseudogene NW_004955453 11145197 11145736 + 102011623 AGCD01044801 MODEL 8760058 protein-coding Eno3 enolase 3 ENCODES a protein that exhibits identical protein binding (ortholog); phosphopyruvate hydratase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); response to xenobiotic stimulus (ortholog); skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955467 10363154 10368261 + 102021867 AGCD01051561;GBDF01119625;XM_005399622 XP_005399679 MODEL 8782395 protein-coding Ern1 endoplasmic reticulum to nucleus signaling 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); endonuclease activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN AIP1-IRE1 complex (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955478 7720664 7803662 + 102028189 AGCD01055988;AGCD01055989;AGCD01055990;AGCD01055991;GBBH01142310;GBDF01040833;XM_013503183 XP_013358637 MODEL 8879138 protein-coding Grem1 gremlin 1, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); protein homodimerization activity (ortholog); protein sequestering activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); colon cancer (ortholog); colorectal cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955416 1812725 1825528 - 102027298 AGCD01016841;GBDJ01173171;XM_005381174 XP_005381231 MODEL 9064216 ncrna LOC102004211 uncharacterized LOC102004211 NW_004955574 1056116 1065039 + 102004211 AGCD01075147;AGCD01075148;GBDF01127794;XR_265063 MODEL 8843634 protein-coding Trmt1 tRNA methyltransferase 1 ENCODES a protein that exhibits tRNA (guanine(26)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN tRNA N2-guanine methylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 68 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955415 32126630 32136770 - 102029616 AGCD01016710;AGCD01016711;GBDF01119256;XM_013512177 XP_013367631 MODEL 8884576 protein-coding A1cf APOBEC1 complementation factor ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA binding (ortholog); INVOLVED IN cytidine to uridine editing (ortholog); embryo implantation (ortholog); mRNA localization resulting in post-transcriptional regulation of gene expression (ortholog); ASSOCIATED WITH breast cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955425 5992538 6077769 - 102003986 AGCD01025363;AGCD01025364;AGCD01025365;GBCQ01093432;XM_005385900;XM_005385901;XM_013514917 XP_005385957;XP_005385958;XP_013370371 MODEL 9041612 protein-coding Ankrd45 ankyrin repeat domain 45 INVOLVED IN cell population proliferation (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); sarcoma (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 13842571 13882625 - 102007295 AGCD01005954;GBDF01308215;XM_005374871 XP_005374928 MODEL 9038808 protein-coding Ccdc59 coiled-coil domain containing 59 ASSOCIATED WITH colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955405 20732649 20738678 - 102030148 AGCD01005062;GBCE01169532;XM_005374398 XP_005374455 MODEL 8985443 protein-coding Col4a5 collagen type IV alpha 5 chain INVOLVED IN collagen-activated tyrosine kinase receptor signaling pathway (ortholog); neuromuscular junction development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alport syndrome (ortholog); Alport syndrome 3A (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog); neuromuscular junction (ortholog) NW_004955490 7168725 7409655 - 102013093 AGCD01060249;AGCD01060250;AGCD01060251;AGCD01060252;AGCD01060253;AGCD01060254;AGCD01060255;AGCD01060256;GBDI01357308;XM_005404674;XM_005404675;XM_005404676;XM_013504524;XM_013504525 XP_005404731;XP_005404732;XP_005404733;XP_013359978;XP_013359979 MODEL 8866003 protein-coding Hspa6 heat shock protein family A (Hsp70) member 6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular heat acclimation (ortholog); cellular response to heat (ortholog); protein refolding (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN centriole (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955462 14723990 14726420 - 102021948 AGCD01049456;GBDF01177875;XM_005398308 XP_005398365 MODEL 39132065 rrna 5S_rRNA 5S ribosomal RNA 8731080 protein-coding Acat2 acetyl-CoA acetyltransferase 2 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to nutrient (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH arteriosclerosis (ortholog); colon adenocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog) NW_004955439 21123886 21142562 - 102017388 AGCD01036140;AGCD01036141;GBDF01081090;XM_005390719 XP_005390776 MODEL 9026283 protein-coding Ift52 intraflagellar transport 52 INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955445 13542726 13580204 - 102025631 AGCD01039791;AGCD01039792;AGCD01039793;AGCD01039794;GBCE01054533;XM_005392497 XP_005392554 MODEL 8860097 ncrna LOC102009682 uncharacterized LOC102009682 NW_004955453 7009688 7017214 + 102009682 AGCD01044736;XR_001236192 MODEL 8837185 protein-coding Gemin4 gem nuclear organelle associated protein 4 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); INVOLVED IN spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); cataract (ortholog); neurodevelopmental disorder with microcephaly, cataracts, and renal abnormalities (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955481 2294406 2301297 - 102026638 AGCD01056873;GBBH01131697;XM_005402640 XP_005402697 MODEL 9045682 protein-coding Agbl4 AGBL carboxypeptidase 4 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN anterograde axonal transport of mitochondrion (ortholog); axonal transport (ortholog); central nervous system neuron development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955464 8847401 10195184 + 102030616 AGCD01050097;AGCD01050098;AGCD01050099;AGCD01050100;AGCD01050101;AGCD01050102;AGCD01050103;AGCD01050104;AGCD01050105;AGCD01050106;AGCD01050107;AGCD01050108;AGCD01050109;AGCD01050110;AGCD01050111;AGCD01050112;AGCD01050113;AGCD01050114;AGCD01050115;AGCD01050116;AGCD01050117;AGCD01050118;AGCD01050119;AGCD01050120;GBDF01194814;XM_005398625;XM_005398626;XM_013521735 XP_005398682;XP_005398683;XP_013377189 MODEL 8883817 ncrna LOC102009295 uncharacterized LOC102009295 NW_004955424 20161293 20182303 - 102009295 AGCD01024845;GBDF01236664;XR_261089 MODEL 8807198 pseudo LOC102004568 poly(A) RNA polymerase GLD2 pseudogene NW_004955458 6342070 6359704 - 102004568 AGCD01047558;AGCD01047559 MODEL 39134370 misc_rna 7SK 7SK RNA 8822385 protein-coding Alg8 ALG8 alpha-1,3-glucosyltransferase ENCODES a protein that exhibits dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Apnea (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955414 13832808 13863076 + 102005585 AGCD01015121;AGCD01015122;AGCD01015123;GBDK01241792;XM_005379820;XM_005379821 XP_005379877;XP_005379878 MODEL 8973305 protein-coding Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of dendrite extension (ortholog); regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); intellectual disability (ortholog); melanoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cerebellar mossy fiber (ortholog); early endosome (ortholog) NW_004955604 242627 260594 - 102017829 AGCD01076874;GBDF01263543;XM_005414870 XP_005414927 MODEL 8937744 protein-coding Jakmip3 Janus kinase and microtubule interacting protein 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955477 9681239 9827704 + 102023353 AGCD01055682;AGCD01055683;AGCD01055684;AGCD01055685;AGCD01055686;GBCE01046959;XM_013503115;XM_013503116;XM_013503117;XM_013503118;XM_013503119;XM_013503120;XM_013503121;XM_013503122;XM_013503123;XM_013503124;XM_013503125;XM_013503126;XM_013503127 XP_013358569;XP_013358570;XP_013358571;XP_013358572;XP_013358573;XP_013358574;XP_013358575;XP_013358576;XP_013358577;XP_013358578;XP_013358579;XP_013358580;XP_013358581 MODEL 8824113 pseudo LOC102011208 40S ribosomal protein S12 pseudogene NW_004955489 506441 506882 - 102011208 AGCD01059807 MODEL 8866341 protein-coding LOC102008192 60S ribosomal protein L37a-like NW_004955458 10729549 10729854 - 102008192 AGCD01047704;XM_005397532 XP_005397589 MODEL 8948078 protein-coding Kcnk2 potassium two pore domain channel subfamily K member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ligand-gated channel activity (ortholog); mechanosensitive potassium channel activity (ortholog); INVOLVED IN cardiac ventricle development (ortholog); cellular response to arachidonate (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH brain ischemia (ortholog); congestive heart failure (ortholog); depressive disorder (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte projection (ortholog); axon (ortholog) NW_004955406 2793493 2975322 - 102010768 AGCD01005662;AGCD01005663;AGCD01005664;GBDK01263945;XM_005374715;XM_005374716;XM_005374717 XP_005374772;XP_005374773;XP_005374774 MODEL 8990901 protein-coding Atp6v1e2 ATPase H+ transporting V1 subunit E2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955441 13432951 13458467 - 102013651 AGCD01037149;AGCD01037150;AGCD01037151;GBDF01047982;XM_005390982;XM_005390983;XM_013517587 XP_005391039;XP_005391040;XP_013373041 MODEL 9006572 ncrna LOC102021816 uncharacterized LOC102021816 NW_004955447 11714605 11734638 + 102021816 AGCD01040914;AGCD01040915;AGCD01040916;GBDF01081165;XR_262420 MODEL 8851349 protein-coding Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif 20 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of melanocyte differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cleft lip (ortholog); Familial Prostate Cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955500 2688281 2850667 - 102004184 AGCD01063712;AGCD01063713;AGCD01063714;AGCD01063715;AGCD01063716;AGCD01063717;AGCD01063718;GBCB01027734;GBCB01112256;XM_005406579 XP_005406636 MODEL 8836957 protein-coding LOC102017730 UPF0577 protein KIAA1324-like homolog NW_004955621 163161 230801 + 102017730 AGCD01077376;AGCD01077377;GBDF01190085;GBDK01420995;XM_013510156 XP_013365610 MODEL 9010434 pseudo LOC102012837 glycerophosphocholine phosphodiesterase GPCPD1 pseudogene NW_004955410 7980036 7985561 - 102012837 AGCD01010730 MODEL 8918437 protein-coding Dip2b disco interacting protein 2 homolog B ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); positive regulation of peptidyl-lysine acetylation (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955547 1012320 1240749 + 102017164 AGCD01072201;AGCD01072202;AGCD01072203;AGCD01072204;GBBH01076687;GBDF01215294;XM_013508452;XM_013508453;XM_013508454 XP_013363906;XP_013363907;XP_013363908 MODEL 39131872 rrna 5S_rRNA 5S ribosomal RNA 8880409 protein-coding Fcer1a Fc fragment of IgE receptor Ia ENCODES a protein that exhibits high-affinity IgE receptor activity (ortholog); IgE binding (ortholog); IgE receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); eosinophil degranulation (ortholog); leukotriene biosynthetic process (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); drug allergy (ortholog); Drug Eruptions (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955468 11094792 11101191 + 102005696 AGCD01052114;GBCE01023162;XM_005400169;XM_013522280;XM_013522281 XP_005400226;XP_013377734;XP_013377735 MODEL 8883750 pseudo LOC102008560 cell division control protein 42 homolog pseudogene NW_004955430 16590042 16591833 - 102008560 AGCD01029642 MODEL 39133933 misc_rna 7SK 7SK RNA 8963522 protein-coding Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ENCODES a protein that exhibits cap-dependent translation initiation factor activity (ortholog); IRES-mediated translation initiation factor activity (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to heat (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955466 2838785 2855443 - 102016902 AGCD01050768;AGCD01050769;GBCB01021958;XM_005399085;XM_005399086;XM_005399087;XM_013521972 XP_005399142;XP_005399143;XP_005399144;XP_013377426 MODEL 10372417 ncrna LOC106149948 uncharacterized LOC106149948 NW_004955458 3788482 3798974 + 106149948 AGCD01047345;AGCD01047346;AGCD01047347;GBCE01168228;XR_001236438 MODEL 8873049 protein-coding Cimip5 ciliary microtubule inner protein 5 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cilium (ortholog) NW_004955487 5843411 5847738 + 102019507 AGCD01059348;XM_005404457 XP_005404514 MODEL 9042402 protein-coding Ildr1 immunoglobulin like domain containing receptor 1 ENCODES a protein that exhibits high-density lipoprotein particle receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); epithelial structure maintenance (ortholog); positive regulation of peptide hormone secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); angiokeratoma (ortholog); aortic aneurysm (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955427 21304460 21333170 - 102007792 AGCD01027440;GBCQ01175397;XM_005386503;XM_013515104;XM_013515105;XM_013515106;XM_013515107;XM_013515108;XM_013515109 XP_005386560;XP_013370558;XP_013370559;XP_013370560;XP_013370561;XP_013370562;XP_013370563 MODEL 8875263 protein-coding Catsper2 cation channel sperm associated 2 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); fertilization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN CatSper complex (ortholog); sperm flagellum (ortholog); sperm principal piece (ortholog) NW_004955409 3925106 3940566 - 102030503 AGCD01009267;AGCD01009268;GBDF01053312;XM_005376669;XM_013509966;XM_013509978 XP_005376726;XP_013365420;XP_013365432 MODEL 8720381 protein-coding LOC102006698 olfactory receptor 1020-like NW_004955511 682056 682990 + 102006698 AGCD01066337;XM_013506361 XP_013361815 MODEL 8701990 protein-coding Ece1 endothelin converting enzyme 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis involved in innervation (ortholog); blood vessel diameter maintenance (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); autonomic nervous system disease (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); external side of plasma membrane (ortholog) NW_004955452 1653783 1704619 - 102028052 AGCD01043860;GBBH01031129;GBDI01008837;XM_005394714 XP_005394771 MODEL 8728466 protein-coding Lingo2 leucine rich repeat and Ig domain containing 2 ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic membrane (ortholog) NW_004955472 5790522 6971152 + 102017227 AGCD01053584;AGCD01053585;AGCD01053586;AGCD01053587;AGCD01053588;AGCD01053589;AGCD01053590;AGCD01053591;AGCD01053592;AGCD01053593;AGCD01053594;AGCD01053595;AGCD01053596;AGCD01053597;AGCD01053598;AGCD01053599;AGCD01053600;AGCD01053601;AGCD01053602;AGCD01053603;AGCD01053604;AGCD01053605;AGCD01053606;AGCD01053607;AGCD01053608;AGCD01053609;AGCD01053610;AGCD01053611;AGCD01053612;AGCD01053613;GBDK01171049;XM_005401120;XM_005401121;XM_005401122;XR_001237087;XR_263553;XR_263554;XR_263555;XR_263556;XR_263557;XR_263558;XR_263559 XP_005401177;XP_005401178;XP_005401179 MODEL 8711058 ncrna LOC102007057 uncharacterized LOC102007057 NW_004955439 18083547 18090067 + 102007057 AGCD01036049;GBDK01269094;XR_001235223;XR_001235224 MODEL 39134371 misc_rna 7SK 7SK RNA 8707316 protein-coding Apom apolipoprotein M ENCODES a protein that exhibits antioxidant activity (ortholog); lipid carrier activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); high-density lipoprotein particle assembly (ortholog); high-density lipoprotein particle clearance (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog); FOUND IN discoidal high-density lipoprotein particle (ortholog); extracellular region (ortholog); high-density lipoprotein particle (ortholog) NW_004955437 190609 192781 + 102014943 AGCD01034108;GBDF01004738;XM_005389332;XM_005389333 XP_005389389;XP_005389390 MODEL 9038956 pseudo LOC102010436 centromere protein L-like NW_004955402 50936205 51007657 + 102010436 AGCD01001288;AGCD01001289 MODEL 39132066 rrna 5S_rRNA 5S ribosomal RNA 8842102 protein-coding LOC102003853 myosin-3 ENCODES a protein that exhibits actin filament binding (ortholog); ATP hydrolysis activity (ortholog); microfilament motor activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN contractile muscle fiber (ortholog); myosin complex (ortholog) NW_004955467 6561609 6583228 + 102003853 AGCD01051416;AGCD01051417;GBDF01285104;XM_005399362 XP_005399419 MODEL 8917209 protein-coding Chat choline O-acetyltransferase ENCODES a protein that exhibits choline binding (ortholog); choline O-acetyltransferase activity (ortholog); INVOLVED IN acetylcholine biosynthetic process (ortholog); adult walking behavior (ortholog); antral ovarian follicle growth (ortholog); PARTICIPATES IN acetylcholine metabolic pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); Alzheimer's disease (ortholog); angle-closure glaucoma (ortholog); FOUND IN neuronal cell body; axon (ortholog); cytoplasm (ortholog) NW_004955556 650290 695135 - 102028690 AGCD01073178;AGCD01073179;XM_005412567 XP_005412624 MODEL 8840768 protein-coding Btg2 BTG anti-proliferation factor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); associative learning (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); brain ischemia (ortholog); breast cancer (ortholog) NW_004955406 39303221 39307308 + 102011732 AGCD01006625;GBCE01078173;XM_005375265 XP_005375322 MODEL 8735754 pseudo LOC102011624 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955406 19815337 19816321 - 102011624 AGCD01006092 MODEL 8891276 protein-coding Gemin5 gem nuclear organelle associated protein 5 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN regulation of translation (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955408 9136490 9179087 - 102008600 AGCD01008235;AGCD01008236;GBDF01122245;XM_005376211;XM_005376212;XM_013508713 XP_005376268;XP_005376269;XP_013364167 MODEL 8700975 protein-coding LOC102005618 UPF0061 protein ETA_18310-like NW_004955429 2822671 2866918 + 102005618 AGCD01028439;AGCD01028440;AGCD01028441;AGCD01028442;AGCD01028443;GBBH01006669;GBCQ01067969;XM_005386894 XP_005386951 MODEL 8931908 pseudo LOC102006699 acyl-protein thioesterase 1 pseudogene NW_004955430 12369664 12370317 + 102006699 AGCD01029499 MODEL 8955627 protein-coding Cdh3 cadherin 3 INVOLVED IN cell-cell adhesion (ortholog); hair cycle process (ortholog); hair follicle maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); plasma membrane (ortholog) NW_004955484 7937847 7985418 - 102006351 AGCD01058359;AGCD01058360;AGCD01058361;GBBH01002203;XM_013503938 XP_013359392 MODEL 8758286 protein-coding Ern2 endoplasmic reticulum to nucleus signaling 2 ENCODES a protein that exhibits ATP binding (ortholog); endonuclease activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955493 2217187 2233920 - 102014683 AGCD01060935;GBBH01165480;GBBH01165568;XM_013504864 XP_013360318 MODEL 8783003 protein-coding Alg9 ALG9 alpha-1,2-mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955412 13510714 13599216 - 102019374 AGCD01012840;AGCD01012841;AGCD01012842;GBDI01026373;XM_005378081;XM_005378083;XM_013511226 XP_005378138;XP_005378140;XP_013366680 MODEL 8800445 protein-coding A3galt2 alpha 1,3-galactosyltransferase 2 ENCODES a protein that exhibits alpha-1,3-galactosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetyllactosaminide 3-alpha-galactosyltransferase activity (ortholog); INVOLVED IN cellular response to manganese ion (ortholog); glycosphingolipid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); vesicle (ortholog) NW_004955452 11476485 11489243 - 102007501 AGCD01044337;GBDJ01003070;XM_005395110;XM_013519536;XM_013519537 XP_005395167;XP_013374990;XP_013374991 MODEL 8874092 protein-coding Clvs2 clavesin 2 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN lysosome organization (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endosome (ortholog); trans-Golgi network (ortholog) NW_004955436 4758749 4823383 + 102026669 AGCD01033673;AGCD01033674;GBCE01019750;XM_005389152 XP_005389209 MODEL 8994292 protein-coding Ankrd46 ankyrin repeat domain 46 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955417 15740108 15750627 - 102017771 AGCD01018241;GBDK01143312;XM_013512830;XM_013512831;XM_013512832 XP_013368284;XP_013368285;XP_013368286 MODEL 8880558 protein-coding LOC102008193 uncharacterized LOC102008193 NW_004955409 10334641 10336946 - 102008193 AGCD01009464;GBDK01043622;XM_005376774;XM_005376775 XP_005376831;XP_005376832 MODEL 9019350 protein-coding LOC102011211 cationic trypsin-3-like NW_004955494 1248108 1252850 + 102011211 AGCD01061393;XM_005405394 XP_005405451 MODEL 8902881 protein-coding LOC102010437 vomeronasal type-1 receptor 4-like NW_004955603 500248 501171 - 102010437 AGCD01076850;XM_005414846 XP_005414903 MODEL 8716895 protein-coding LOC102017731 arylamine N-acetyltransferase 2-like NW_004955403 42305517 42311914 + 102017731 AGCD01002751;GBDJ01116357;XM_005373603 XP_005373660 MODEL 8833558 protein-coding Atp6v1f ATPase H+ transporting V1 subunit F ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) NW_004955479 9664574 9667667 + 102005708 AGCD01056485;AGCD01056486;GBCB01001485;XM_005402399 XP_005402456 MODEL 8951650 protein-coding Acbd3 acyl-CoA binding domain containing 3 ENCODES a protein that exhibits protein kinase A regulatory subunit binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955489 337578 381557 - 102020016 AGCD01059796;AGCD01059797;AGCD01059798;AGCD01059799;GBBH01050351;GBDF01125939;XM_013504481 XP_013359935 MODEL 8914392 protein-coding Ift54 intraflagellar transport 54 INVOLVED IN cilium assembly (ortholog); embryonic camera-type eye development (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955542 2264472 2301083 - 102024052 AGCD01071516;AGCD01071517;GBDJ01272447;GBDK01234988;XM_005411182 XP_005411239 MODEL 8793979 pseudo LOC102009690 olfactory receptor 1361-like NW_004955408 1614860 1615787 + 102009690 AGCD01007967 MODEL 8736996 protein-coding Eif2s2 eukaryotic translation initiation factor 2 subunit beta ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); in utero embryonic development (ortholog); male germ cell proliferation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); nucleus (ortholog) NW_004955422 27245381 27263342 + 102025372 AGCD01023317;GBDF01006023;XM_005384835 XP_005384892 MODEL 8858369 protein-coding Ildr2 immunoglobulin like domain containing receptor 2 INVOLVED IN cell differentiation (ortholog); homeostasis of number of cells within a tissue (ortholog); insulin secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleus (ortholog); tight junction (ortholog) NW_004955462 9953393 10016339 + 102030613 AGCD01049346;AGCD01049347;AGCD01049348;AGCD01049349;AGCD01049350;GBCE01147847;GBDF01303897;XM_013521459 XP_013376913 MODEL 9052322 protein-coding Eno4 enolase 4 ENCODES a protein that exhibits phosphopyruvate hydratase activity (ortholog); INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); glycolytic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); male infertility (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955431 21625808 21650282 + 102024713 AGCD01030496;GBCE01181692;XM_005387856;XM_005387858;XM_005387859 XP_005387913;XP_005387915;XP_005387916 MODEL 8876927 pseudo LOC102004569 60S ribosomal protein L30-like NW_004955409 9047353 9047699 - 102004569 AGCD01009428 MODEL 8741138 protein-coding Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ionotropic glutamate receptor binding (ortholog); protein phosphatase 2B binding (ortholog); INVOLVED IN positive regulation of AMPA receptor activity (ortholog); regulation of AMPA receptor activity (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH antisocial personality disorder (ortholog); dilated cardiomyopathy (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite membrane (ortholog); glutamatergic synapse (ortholog) NW_004955604 204482 221833 - 102021194 AGCD01076868;AGCD01076869;AGCD01076870;AGCD01076871;GBDF01255784;XM_013510086 XP_013365540 MODEL 10179767 protein-coding Ccdc6 coiled-coil domain containing 6 ENCODES a protein that exhibits identical protein binding (ortholog); protein complex scaffold activity (ortholog); INVOLVED IN positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog) NW_004955425 13344926 13444802 - 106148619 AGCD01025535;GBDJ01016803;XM_013514770 XP_013370224 MODEL 8974728 protein-coding Jam2 junctional adhesion molecule 2 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cellular extravasation (ortholog); hematopoietic stem cell migration to bone marrow (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); autism spectrum disorder (ortholog); FOUND IN anchoring junction (ortholog); axon (ortholog); cell surface (ortholog) NW_004955407 25531891 25599551 + 102010448 AGCD01007510;AGCD01007511;AGCD01007512;GBBH01102041;GBCQ01003827;XM_013503918 XP_013359372 MODEL 9018318 protein-coding Trmt10a tRNA methyltransferase 10A ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN magnesium ion homeostasis (ortholog); tRNA methylation (ortholog); tRNA N1-guanine methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955496 8021747 8037562 + 102023493 AGCD01062387;GBDI01279046;XM_005406269;XM_005406270 XP_005406326;XP_005406327 MODEL 9023565 protein-coding Gemin6 gem nuclear organelle associated protein 6 INVOLVED IN spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) NW_004955441 6456482 6461027 + 102012367 AGCD01036922;GBCQ01122381;XM_005390892;XM_005390893;XM_005390894;XM_005390895;XM_005390896 XP_005390949;XP_005390950;XP_005390951;XP_005390952;XP_005390953 MODEL 8921852 protein-coding Col4a6 collagen type IV alpha 6 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); extracellular matrix organization (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Epithelioid Leiomyoma (ortholog); Hearing Loss (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) NW_004955490 7409687 7764300 + 102014058 AGCD01060256;AGCD01060257;AGCD01060258;AGCD01060259;AGCD01060260;AGCD01060261;AGCD01060262;AGCD01060263;GBDI01249765;XM_005404677 XP_005404734 MODEL 9014308 protein-coding Kcnk3 potassium two pore domain channel subfamily K member 3 ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); open rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to hypoxia (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH Ataxia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955469 8710749 8744423 + 102014884 AGCD01052479;AGCD01052480;AGCD01052481;GBDF01145201;GBDI01357949;XM_005400437 XP_005400494 MODEL 39131873 rrna 5S_rRNA 5S ribosomal RNA 9048803 protein-coding Adamts3 ADAM metallopeptidase with thrombospondin type 1 motif 3 ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN collagen biosynthetic process (ortholog); in utero embryonic development (ortholog); positive regulation of vascular endothelial growth factor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ascites (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955447 803287 1036435 + 102019752 AGCD01040487;AGCD01040488;AGCD01040489;AGCD01040490;AGCD01040491;GBCE01120181;XM_005392768 XP_005392825 MODEL 39134069 misc_rna 7SK 7SK RNA 8906293 protein-coding Fcer1g Fc fragment of IgE receptor Ig ENCODES a protein that exhibits identical protein binding (ortholog); IgE binding (ortholog); IgE receptor activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); drug allergy (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); Fc-epsilon receptor I complex (ortholog) NW_004955468 12971931 12975206 + 102007326 AGCD01052194;GBDK01019203;XM_005400269 XP_005400326 MODEL 8969019 pseudo LOC102021822 uncharacterized LOC102021822 NW_004955449 1866887 1881411 + 102021822 AGCD01041814 MODEL 39133934 misc_rna 7SK 7SK RNA 8798562 protein-coding Dip2c disco interacting protein 2 homolog C INVOLVED IN brain development (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955492 543026 764697 + 102012866 AGCD01060642;AGCD01060643;AGCD01060644;GBDF01249271;XM_013504713;XM_013504714;XM_013504715;XM_013504716 XP_013360167;XP_013360168;XP_013360169;XP_013360170 MODEL 8939356 protein-coding LOC102003857 mediator of RNA polymerase II transcription subunit 6-like NW_004955413 23892506 23893445 - 102003857 AGCD01014339;XM_005379202;XM_013511365 XP_005379259;XP_013366819 MODEL 8999998 protein-coding Cd14 CD14 molecule ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); lipoteichoic acid binding (ortholog); INVOLVED IN cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to diacyl bacterial lipopeptide (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN cardiovascular system disease pathway; innate immune response pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Adrenal Insufficiency (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955418 73736 75345 + 102029626 AGCD01018666;GBDK01066282;XM_005382018 XP_005382075 MODEL 8792406 pseudo LOC102009303 39S ribosomal protein L28, mitochondrial pseudogene NW_004955428 16029765 16030480 - 102009303 AGCD01028014 MODEL 8938936 protein-coding Agbl5 AGBL carboxypeptidase 5 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN defense response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); midbody (ortholog) NW_004955469 9023753 9041674 + 102018486 AGCD01052488;GBDF01007627;XM_005400448;XM_005400449;XM_013522608 XP_005400505;XP_005400506;XP_013378062 MODEL 8712354 protein-coding Ece2 endothelin converting enzyme 2 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN peptide hormone processing (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) NW_004955420 23199627 23217078 - 102024685 AGCD01021233;GBDF01270605;XM_005383341;XM_013513360 XP_005383398;XP_013368814 MODEL 8767239 protein-coding Grem2 gremlin 2, DAN family BMP antagonist ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); determination of dorsal identity (ortholog); embryonic body morphogenesis (ortholog); ASSOCIATED WITH Selective Tooth Agenesis 9 (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 11245960 11343677 + 102020525 AGCD01005884;GBCE01052016;XM_005374827;XM_013520576 XP_005374884;XP_013376030 MODEL 8944462 protein-coding LOC102004212 cytochrome P450 2F3 ENCODES a protein that exhibits monooxygenase activity (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN naphthalene catabolic process (ortholog); response to toxic substance (ortholog); trichloroethylene metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Experimental Liver Neoplasms (ortholog); hepatocellular carcinoma (ortholog) NW_004955578 530094 541951 + 102004212 AGCD01075488;GBCQ01007573;XM_005414015 XP_005414072 MODEL 39134372 misc_rna 7SK 7SK RNA 8783671 protein-coding Apoo apolipoprotein O INVOLVED IN cristae formation (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lactic acidosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); extracellular region (ortholog); Golgi membrane (ortholog) NW_004955509 4256834 4325086 - 102015873 AGCD01066061;AGCD01066062;AGCD01066063;AGCD01066064;GBDF01222597;XM_005407836;XM_005407837;XM_013506305 XP_005407893;XP_005407894;XP_013361759 MODEL 8971750 pseudo LOC102012841 LYR motif-containing protein 1 pseudogene NW_004955466 2598628 2602417 - 102012841 AGCD01050748 MODEL 8818937 protein-coding Hspa8 heat shock protein family A (Hsp70) member 8 ENCODES a protein that exhibits A1 adenosine receptor binding (ortholog); AP-3 adaptor complex binding (ortholog); ATP binding (ortholog); INVOLVED IN ATP metabolic process (ortholog); autophagy (ortholog); axo-dendritic transport (ortholog); PARTICIPATES IN androgen signaling pathway; chaperone mediated autophagy pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN asymmetric synapse (ortholog); autophagosome (ortholog); axon (ortholog) NW_004955412 23863513 23867984 - 102021223 AGCD01013100;GBCQ01005649;XM_005378379 XP_005378436 MODEL 9060023 pseudo LOC102008195 40S ribosomal protein S14 pseudogene NW_004955409 22320691 22321337 + 102008195 AGCD01010034 MODEL 39132067 rrna 5S_rRNA 5S ribosomal RNA 9052103 protein-coding A4galt alpha 1,4-galactosyltransferase (P1PK blood group) ENCODES a protein that exhibits galactosyltransferase activity (ortholog); lactosylceramide 4-alpha-galactosyltransferase activity (ortholog); toxic substance binding (ortholog); INVOLVED IN globoside biosynthetic process (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); Caffey disease (ortholog); NOR POLYAGGLUTINATION SYNDROME (ortholog); FOUND IN membrane (ortholog) NW_004955413 28018363 28038359 - 102012849 AGCD01014543;AGCD01014544;GBDJ01313989;XM_005379423 XP_005379480 MODEL 8701722 protein-coding Chchd1 coiled-coil-helix-coiled-coil-helix domain containing 1 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955437 18117090 18118586 - 102013006 AGCD01034774;GBDK01143051;XM_005389962 XP_005390019 MODEL 8968739 protein-coding Catsper3 cation channel sperm associated 3 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sodium ion transport (ortholog); sperm capacitation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); CatSper complex (ortholog); endoplasmic reticulum (ortholog) NW_004955408 30150736 30179834 + 102007859 AGCD01008799;AGCD01008800;GBDF01224920;XM_005376470;XM_013507175;XM_013507180;XM_013507183 XP_005376527;XP_013362629;XP_013362634;XP_013362637 MODEL 8864864 pseudo LOC102011627 glyceraldehyde-3-phosphate dehydrogenase pseudogene NW_004955456 12484506 12486673 - 102011627 AGCD01046567 MODEL 8719387 protein-coding Eif2s3 eukaryotic translation initiation factor 2 subunit gamma ENCODES a protein that exhibits translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH aphasia (ortholog); aspiration pneumonia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); nucleus (ortholog) NW_004955509 4437044 4457819 + 102016732 AGCD01066065;AGCD01066066;AGCD01066067;GBCQ01034165;XM_005407839 XP_005407896 MODEL 8757276 ncrna LOC102005620 uncharacterized LOC102005620 NW_004955430 3876763 3953407 + 102005620 AGCD01029230;AGCD01029231;AGCD01029232;AGCD01029233;AGCD01029234;AGCD01029235;AGCD01029236;AGCD01029237;AGCD01029238;AGCD01029239;GBDF01177758;XR_001234564;XR_261415 MODEL 9013373 protein-coding Lingo3 leucine rich repeat and Ig domain containing 3 ASSOCIATED WITH myoepithelioma (ortholog); thymoma (ortholog) NW_004955495 5850956 5862249 + 102013518 AGCD01062036;AGCD01062037;AGCD01062038;GBCB01056095;GBCB01056097;XM_013505232 XP_013360686 MODEL 9027147 pseudo LOC102006703 cyclin-O pseudogene NW_004955515 1305213 1307829 + 102006703 AGCD01067223 MODEL 8993297 protein-coding LOC102007058 keratin, type II cuticular Hb5 NW_004955547 2711781 2718828 - 102007058 AGCD01072294;GBCB01095717;XM_005411935 XP_005411992 MODEL 8826072 protein-coding Ilf2 interleukin enhancer binding factor 2 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955545 308560 316053 - 102018983 AGCD01071783;AGCD01071784;GBDK01416208;XM_005411437;XM_005411438 XP_005411494;XP_005411495 MODEL 9025217 protein-coding Ero1a endoplasmic reticulum oxidoreductase 1 alpha ENCODES a protein that exhibits flavin-dependent sulfhydryl oxidase activity (ortholog); oxidoreductase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell redox homeostasis (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Hypoxia-Ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955409 10495892 10533383 + 102009917 AGCD01009474;AGCD01009475;GBCE01145796;XM_005376780 XP_005376837 MODEL 8903922 ncrna LOC102008561 uncharacterized LOC102008561 NW_004955432 20882075 20884968 - 102008561 AGCD01031209;AGCD01031210;XR_261538 MODEL 8839010 protein-coding Cdh4 cadherin 4 INVOLVED IN axon guidance (ortholog); heterophilic cell-cell adhesion (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955528 2040373 2594602 - 102013964 AGCD01069581;AGCD01069582;AGCD01069583;AGCD01069584;AGCD01069585;AGCD01069586;AGCD01069587;GBCQ01107558;GBDI01141363;XM_013507435 XP_013362889 MODEL 8987388 protein-coding Jam3 junctional adhesion molecule 3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN adaptive immune response (ortholog); adherens junction assembly (ortholog); angiogenesis (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autism spectrum disorder (ortholog); Carcinoma, Lewis Lung (ortholog); FOUND IN anchoring junction (ortholog); bicellular tight junction (ortholog); cell-cell contact zone (ortholog) NW_004955412 34901850 34967394 + 102028517 AGCD01013395;AGCD01013396;GBBH01165678;XM_005378586;XM_005378587;XM_013511148 XP_005378643;XP_005378644;XP_013366602 MODEL 8953539 protein-coding Ankrd50 ankyrin repeat domain containing 50 INVOLVED IN endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955428 16360602 16397829 + 102009636 AGCD01028021;GBDK01192159;XM_005386751 XP_005386808 MODEL 8962258 protein-coding Clxn calaxin INVOLVED IN regulation of cilium movement (ortholog); regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH Primary Ciliary Dyskinesia 53 (ortholog); thymoma (ortholog); urinary bladder cancer (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) NW_004955454 8570014 8591904 - 102024424 AGCD01045325;GBCE01059363;XM_005396042;XM_005396043;XM_005396044;XM_013520218;XR_262782;XR_262783 XP_005396099;XP_005396100;XP_005396101;XP_013375672 MODEL 8826820 protein-coding Gemin8 gem nuclear organelle associated protein 8 INVOLVED IN spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955519 4205660 4228174 + 102021476 AGCD01067981;GBDK01285087;XM_005409185 XP_005409242 MODEL 8973019 ncrna LOC102010438 uncharacterized LOC102010438 NW_004955649 5929 9935 + 102010438 AGCD01077777;AGCD01077778;GBDJ01151562;XR_265178 MODEL 8951590 protein-coding LOC102017735 cytochrome c, somatic-like NW_004955404 12414422 12414848 + 102017735 AGCD01003461;XM_005374082 XP_005374139 MODEL 8768400 protein-coding Kcnk4 potassium two pore domain channel subfamily K member 4 ENCODES a protein that exhibits identical protein binding (ortholog); mechanosensitive potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to alkaline pH (ortholog); cellular response to arachidonate (ortholog); ASSOCIATED WITH Facial Dysmorphism, Hypertrichosis, Epilepsy, Intellectual/Developmental Delay, and Gingival Overgrowth Syndrome (ortholog); FOUND IN node of Ranvier (ortholog); plasma membrane (ortholog); potassium channel complex (ortholog) NW_004955422 20780765 20788988 - 102012867 AGCD01023087;GBDI01041896;XM_013514228;XM_013514229;XM_013514230;XM_013514231;XM_013514232;XM_013514233 XP_013369682;XP_013369683;XP_013369684;XP_013369685;XP_013369686;XP_013369687 MODEL 8738091 protein-coding Atp6v1g1 ATPase H+ transporting V1 subunit G1 ENCODES a protein that exhibits ATPase binding (ortholog); proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH pancreatic adenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955419 13047755 13056113 - 102009948 AGCD01019995;GBDF01008199;XM_005382627 XP_005382684 MODEL 8832642 protein-coding Fcer2 Fc fragment of IgE receptor II ENCODES a protein that exhibits IgE binding (ortholog); low-affinity IgE receptor activity (ortholog); protease binding (ortholog); INVOLVED IN B cell antigen processing and presentation (ortholog); defense response to bacterium (ortholog); Fc receptor-mediated immune complex endocytosis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); encephalitis (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955563 1587471 1596707 + 102025629 AGCD01074153;GBBH01149979;XM_005413162;XM_013509156;XM_013509157;XM_013509158;XM_013509159;XM_013509160 XP_005413219;XP_013364610;XP_013364611;XP_013364612;XP_013364613;XP_013364614 MODEL 39133935 misc_rna 7SK 7SK RNA 8751704 ncrna LOC102009699 uncharacterized LOC102009699 NW_004955463 10028163 10058844 + 102009699 AGCD01049805;GBDF01179188;XR_263167;XR_263168 MODEL 8765502 protein-coding Enoph1 enolase-phosphatase 1 ENCODES a protein that exhibits acireductone synthase activity (ortholog); INVOLVED IN L-methionine cycle (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955433 6522663 6549352 + 102006942 AGCD01031540;AGCD01031541;GBBH01186039;GBDI01188550;XM_005388244 XP_005388301 MODEL 10338240 ncrna LOC106149949 uncharacterized LOC106149949 NW_004955458 14382215 14392808 - 106149949 AGCD01047832;XR_001236440 MODEL 8968029 pseudo LOC102004571 PEST proteolytic signal-containing nuclear protein-like NW_004955409 13992640 13993276 - 102004571 AGCD01009631 MODEL 39131314 protein-coding CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 8838018 protein-coding LOC102006704 type-1 protein phosphatase inhibitor 4-like NW_004955516 5498178 5498969 + 102006704 AGCD01067562;GBDF01004265;XM_005409000 XP_005409057 MODEL 39134373 misc_rna 7SK 7SK RNA 9048400 protein-coding Trmt10b tRNA methyltransferase 10B ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955419 28693509 28720006 - 102004072 AGCD01020473;GBDI01353475;XM_005382868;XM_005382869;XM_005382870;XM_005382871;XM_005382872;XM_013513181;XM_013513182 XP_005382925;XP_005382926;XP_005382927;XP_005382928;XP_005382929;XP_013368635;XP_013368636 MODEL 8705224 protein-coding Alk ALK receptor tyrosine kinase ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN adult behavior (ortholog); brain development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anaplastic large cell lymphoma (ortholog); anxiety disorder (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955469 11049373 11751235 - 102019052 AGCD01052554;AGCD01052555;AGCD01052556;AGCD01052557;AGCD01052558;AGCD01052559;AGCD01052560;AGCD01052561;AGCD01052562;AGCD01052563;AGCD01052564;AGCD01052565;AGCD01052566;GBCQ01044578;XM_005400546 XP_005400603 MODEL 9043098 pseudo LOC102011212 rRNA-processing protein FCF1 homolog pseudogene NW_004955494 5808071 5843724 - 102011212 AGCD01061526 MODEL 8749983 protein-coding Hspa9 heat shock protein family A (Hsp70) member 9 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); enzyme binding (ortholog); fibroblast growth factor binding (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); cellular response to interleukin-1 (ortholog); erythrocyte differentiation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; presequence pathway of mitochondrial protein import; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autoimmune disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955418 1915985 1931017 + 102025464 AGCD01018735;GBDF01048780;XM_005382096 XP_005382153 MODEL 39132068 rrna 5S_rRNA 5S ribosomal RNA 39134070 misc_rna 7SK 7SK RNA 8807218 protein-coding Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif 4 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); proteoglycan catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); degenerative disc disease (ortholog); FOUND IN extracellular region (ortholog); nuclear speck (ortholog) NW_004955468 12950333 12958599 - 102004590 AGCD01052193;GBCE01057297;XM_005400258 XP_005400315 MODEL 9042876 ncrna LOC102003860 uncharacterized LOC102003860 NW_004955470 10705641 10717884 + 102003860 AGCD01052875;GBCE01089457;XR_263497 MODEL 9029091 protein-coding Acbd4 acyl-CoA binding domain containing 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 17833985 17840071 + 102024637 AGCD01043775;AGCD01043776;GBDI01062558;XM_005394568;XM_005394569;XM_005394570;XM_005394571;XM_005394572 XP_005394625;XP_005394626;XP_005394627;XP_005394628;XP_005394629 MODEL 9054227 protein-coding LOC102009305 olfactory receptor 1030-like NW_004955511 1711783 1712721 + 102009305 AGCD01066377;XM_005407973 XP_005408030 MODEL 8734333 protein-coding Btg3 BTG anti-proliferation factor 3 INVOLVED IN negative regulation of mitotic cell cycle (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH cholestasis (ortholog); renal cell carcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955407 18927211 18939576 - 102012927 AGCD01007289;GBCE01095553;GBDF01047524;XM_013503870 XP_013359324 MODEL 8762786 protein-coding Cd151 CD151 molecule (Raph blood group) ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of cell migration (ortholog); positive regulation of endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Epidermolysis Bullosa Simplex 7, with Nephropathy and Deafness (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955476 11294359 11298990 - 102008405 AGCD01055447;AGCD01055448;GBBH01031085;GBCE01004306;XM_005401807 XP_005401864 MODEL 9011629 protein-coding LOC102005621 olfactory receptor 5B3-like NW_004955511 3197583 3200113 - 102005621 AGCD01066448;XM_013506384 XP_013361838 MODEL 8711780 protein-coding Grhl1 grainyhead like transcription factor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN desmosome organization (ortholog); epidermis development (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 5407187 5432828 + 102027193 AGCD01059332;GBDF01305732;GBDF01305734;XM_005404405 XP_005404462 MODEL 8949985 protein-coding Ech1 enoyl-CoA hydratase 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); glucose intolerance (ortholog); FOUND IN mitochondrion (ortholog) NW_004955468 686171 692737 + 102009033 AGCD01051725;GBDF01050809;XM_005399829 XP_005399886 MODEL 8888702 pseudo LOC102004215 RAC-gamma serine/threonine-protein kinase pseudogene NW_004955582 211110 212482 - 102004215 AGCD01075749 MODEL 9018695 protein-coding Ager advanced glycosylation end-product specific receptor ENCODES a protein that exhibits advanced glycation end-product binding (ortholog); amyloid-beta binding (ortholog); DNA binding (ortholog); INVOLVED IN astrocyte activation (ortholog); astrocyte development (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN Ras mediated signaling pathway; receptor for advanced glycation end-products signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basal plasma membrane (ortholog) NW_004955437 645482 648607 - 102009984 AGCD01034152;GBDK01021118;XM_005389412;XM_005389414 XP_005389469;XP_005389471 MODEL 39131529 protein-coding CCDC6 coiled-coil domain containing 6 8843888 pseudo LOC102012843 T-complex protein 1 subunit alpha pseudogene NW_004955466 3144704 3150696 - 102012843 AGCD01050787 MODEL 8968408 protein-coding Ero1b endoplasmic reticulum oxidoreductase 1 beta ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); extracellular matrix organization (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); membrane (ortholog) NW_004955492 3845406 3911671 + 102021987 AGCD01060701;AGCD01060702;AGCD01060703;AGCD01060704;AGCD01060705;GBBH01198228;GBDF01009565;XM_013504712 XP_013360166 MODEL 8885207 protein-coding Ift56 intraflagellar transport 56 ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH BILIARY, RENAL, NEUROLOGIC, AND SKELETAL SYNDROME (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955494 3861679 3905499 - 102028648 AGCD01061488;AGCD01061489;AGCD01061490;GBDF01120106;XM_005405446;XM_005405447 XP_005405503;XP_005405504 MODEL 9014928 protein-coding Col5a1 collagen type V alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); heparin binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN blood vessel development (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH 17-beta hydroxysteroid dehydrogenase 3 deficiency (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN basement membrane (ortholog); collagen trimer (ortholog); collagen type V trimer (ortholog) NW_004955513 3533612 3660605 + 102024493 AGCD01066907;AGCD01066908;GBBH01165211;GBCQ01175559;XM_005408644;XM_013506703 XP_005408701;XP_013362157 MODEL 39131874 rrna 5S_rRNA 5S ribosomal RNA 8702276 pseudo LOC102008196 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 pseudogene NW_004955410 6003925 6016151 - 102008196 AGCD01010695 MODEL 8840528 pseudo LOC102021823 isocitrate dehydrogenase [NADP], mitochondrial pseudogene NW_004955402 16758485 16759946 + 102021823 AGCD01000488 MODEL 8874612 protein-coding Kcnk5 potassium two pore domain channel subfamily K member 5 ENCODES a protein that exhibits outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN potassium ion export across plasma membrane (ortholog); potassium ion import across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH status epilepticus (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955437 4275806 4313772 + 102011804 AGCD01034364;GBBH01040953;XM_005389599;XM_005389600;XM_005389602;XM_005389603;XM_013517095;XM_013517096 XP_005389656;XP_005389657;XP_005389659;XP_005389660;XP_013372549;XP_013372550 MODEL 8842458 pseudo LOC102011628 26S proteasome non-ATPase regulatory subunit 14-like NW_004955457 7388758 7389844 + 102011628 AGCD01046877 MODEL 8768214 protein-coding Cimip6 ciliary microtubule inner protein 6 ASSOCIATED WITH colon adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955441 19944178 20041318 + 102004646 AGCD01037385;AGCD01037386;AGCD01037387;AGCD01037388;AGCD01037389;AGCD01037390;AGCD01037391;AGCD01037392;GBCQ01063051;XM_005391030 XP_005391087 MODEL 9053801 protein-coding Cep15 centrosomal protein 15 ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955517 3475345 3489911 - 102025715 AGCD01067651;GBCQ01139343;GBDI01337888;XM_005409045 XP_005409102 MODEL 8857177 protein-coding Apool apolipoprotein O like PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH autistic disorder (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955529 3849326 3929588 + 102022117 AGCD01069803;AGCD01069804;AGCD01069805;AGCD01069806;GBBH01149693;XM_005410081 XP_005410138 MODEL 8762799 protein-coding LOC102008562 carboxylesterase 1D-like NW_004955433 13405185 13440775 - 102008562 AGCD01031690;GBDJ01424046;XM_005388329;XM_005388330 XP_005388386;XP_005388387 MODEL 8839780 protein-coding Agfg1 ArfGAP with FG repeats 1 INVOLVED IN acrosome assembly (ortholog); intermediate filament organization (ortholog); spermatid nucleus differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); neuronal cell body (ortholog); nucleus (ortholog) NW_004955453 7066509 7127878 - 102009011 AGCD01044736;AGCD01044737;GBCQ01094513;GBDF01002248;XM_013519948 XP_013375402 MODEL 9045940 protein-coding Ilf3 interleukin enhancer binding factor 3 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of translation (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955495 1814012 1844605 + 102010277 AGCD01061733;AGCD01061734;AGCD01061735;GBDF01047065;XM_005405615;XM_005405616;XM_005405618;XM_005405619;XM_005405621;XM_005405622;XM_005405623;XM_013505145;XM_013505146 XP_005405672;XP_005405673;XP_005405675;XP_005405676;XP_005405678;XP_005405679;XP_005405680;XP_013360599;XP_013360600 MODEL 8761524 protein-coding Jaml junction adhesion molecule like ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN gamma-delta T cell activation (ortholog); heterophilic cell-cell adhesion (ortholog); monocyte extravasation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN anchoring junction (ortholog); bicellular tight junction (ortholog); plasma membrane (ortholog) NW_004955412 19363501 19402213 - 102018484 AGCD01012951;GBBH01026535;XM_013511155;XM_013511156;XM_013511157;XM_013511158;XM_013511159 XP_013366609;XP_013366610;XP_013366611;XP_013366612;XP_013366613 MODEL 8926852 protein-coding A4gnt alpha-1,4-N-acetylglucosaminyltransferase ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of epithelial cell proliferation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); melanoma (ortholog) NW_004955501 881851 887977 + 102016934 AGCD01064043;XM_005406864 XP_005406921 MODEL 9023177 protein-coding Ankrd52 ankyrin repeat domain 52 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955458 3849400 3867167 - 102027721 AGCD01047351;GBBH01228075;GBCB01039149;XM_013520831 XP_013376285 MODEL 8789268 ncrna LOC102011218 uncharacterized LOC102011218 NW_004955424 20490173 20500552 + 102011218 AGCD01024856;AGCD01024857;AGCD01024858;GBCB01025533;XR_001234179;XR_261091 MODEL 8802316 protein-coding Dipk1a divergent protein kinase domain 1A ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955423 1651562 1748651 + 102021023 AGCD01023444;AGCD01023445;AGCD01023446;AGCD01023447;AGCD01023448;AGCD01023449;AGCD01023450;AGCD01023451;GBCE01142261;XM_005385041 XP_005385098 MODEL 8814501 protein-coding Hspb1 heat shock protein family B (small) member 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein folding chaperone (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to butyrate (ortholog); cellular response to hydrogen peroxide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN axon (ortholog); cardiac myofibril (ortholog); contractile muscle fiber (ortholog) NW_004955844 8094 9565 + 102017834 AGCD01078476;GBBH01001226;XM_005415130 XP_005415187 MODEL 39133936 misc_rna 7SK 7SK RNA 8769781 protein-coding Catsper4 cation channel sperm associated 4 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sodium ion transport (ortholog); sperm capacitation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog); CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955439 21098751 21111906 + 102015772 AGCD01036138;GBDF01045912;XM_005390713 XP_005390770 MODEL 9065288 protein-coding LOC102021828 zinc finger protein 883-like NW_004955624 123806 130903 - 102021828 AGCD01077437;XM_013510160 XP_013365614 MODEL 8887906 ncrna LOC102003861 uncharacterized LOC102003861 NW_004955472 10850722 10854380 + 102003861 AGCD01053727;GBDF01178480;XR_263568 MODEL 8870492 protein-coding Fcf1 FCF1 rRNA-processing protein INVOLVED IN endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN small-subunit processome (ortholog) NW_004955523 801117 818521 - 102017807 AGCD01068480;AGCD01068481;GBCQ01095904;XM_005409391 XP_005409448 MODEL 8932339 protein-coding Atp6v1g2 ATPase H+ transporting V1 subunit G2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); melanosome (ortholog); synaptic vesicle membrane (ortholog) NW_004955437 86053 88355 - 102010195 AGCD01034101;GBBH01136619;XM_005389315;XM_013516927 XP_005389372;XP_013372381 MODEL 8846286 protein-coding Eif3a eukaryotic translation initiation factor 3 subunit A ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN formation of cytoplasmic translation initiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) NW_004955431 23542842 23578892 - 102005830 AGCD01030538;AGCD01030539;AGCD01030540;GBDJ01086793;XM_005387883 XP_005387940 MODEL 8707944 protein-coding Lingo4 leucine rich repeat and Ig domain containing 4 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian cancer (ortholog); polymicrogyria (ortholog) NW_004955589 618959 623915 + 102013567 AGCD01076179;GBDF01150351;XM_005414547 XP_005414604 MODEL 8848885 ncrna LOC102007060 uncharacterized LOC102007060 NW_004955554 703446 714957 + 102007060 AGCD01072953;GBDF01082739;XR_001232295;XR_264946 MODEL 10285570 ncrna LOC106149950 uncharacterized LOC106149950 NW_004955458 4878926 4881805 - 106149950 AGCD01047444;GBDK01106220;XR_001236443 MODEL 8739342 ncrna LOC102006708 uncharacterized LOC102006708 NW_004955437 17938818 17949903 - 102006708 AGCD01034764;AGCD01034765;XR_001235038;XR_261890 MODEL 8759570 ncrna LOC102004217 uncharacterized LOC102004217 NW_004955449 14240223 14246011 - 102004217 AGCD01042162;AGCD01042163;XR_262502 MODEL 8827526 protein-coding Enosf1 enolase superfamily member 1 ENCODES a protein that exhibits L-fuconate dehydratase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN carbohydrate catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN mitochondrion (ortholog) NW_004955402 9266198 9297897 + 102023212 AGCD01000211;AGCD01000212;GBBH01158568;XM_005372673;XM_013519244;XM_013519282;XM_013519332;XM_013519378;XM_013519436;XM_013519451;XM_013519472;XM_013519499;XM_013519540 XP_005372730;XP_013374698;XP_013374736;XP_013374786;XP_013374832;XP_013374890;XP_013374905;XP_013374926;XP_013374953;XP_013374994 MODEL 39134374 misc_rna 7SK 7SK RNA 9017542 protein-coding Echdc1 ethylmalonyl-CoA decarboxylase 1 ENCODES a protein that exhibits carboxy-lyase activity (ortholog); methyl/ethyl malonyl-CoA decarboxylase activity (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955436 8332066 8365200 - 102008144 AGCD01033737;AGCD01033738;GBCQ01093617;XM_005389168;XM_013516634;XM_013516635 XP_005389225;XP_013372088;XP_013372089 MODEL 8999657 ncrna LOC102017737 uncharacterized LOC102017737 NW_004955404 29784924 29788045 + 102017737 AGCD01003985;GBDJ01123967;XR_259327 MODEL 8838948 ncrna LOC102010442 uncharacterized LOC102010442 NW_004955452 2929736 2933649 - 102010442 AGCD01043906;GBDF01177228;XR_262642 MODEL 9024177 protein-coding Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 INVOLVED IN inner mitochondrial membrane organization (ortholog); mitochondrial membrane organization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH atrophic muscular disease (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955455 8472833 8474745 + 102013475 AGCD01045896;GBCQ01010321;XM_005396426 XP_005396483 MODEL 39132070 rrna 5S_rRNA 5S ribosomal RNA 8764257 protein-coding Col5a2 collagen type V alpha 2 chain ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); collagen fibril organization (ortholog); eye morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH anemia (ortholog); Aneurysm (ortholog); aortic disease (ortholog); FOUND IN collagen trimer (ortholog); collagen type V trimer (ortholog) NW_004955403 9562401 9703828 + 102009001 AGCD01001908;AGCD01001909;AGCD01001910;AGCD01001911;AGCD01001912;AGCD01001913;GBCE01029823;XM_005373323 XP_005373380 MODEL 39134071 misc_rna 7SK 7SK RNA 8830631 pseudo LOC102009701 heterogeneous nuclear ribonucleoprotein A1-like NW_004955411 2718176 2739446 - 102009701 AGCD01011515;AGCD01011516 MODEL 8797248 protein-coding Acbd5 acyl-CoA binding domain containing 5 INVOLVED IN pexophagy (ortholog); ASSOCIATED WITH brain disease (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN peroxisome (ortholog) NW_004955429 2623042 2661182 - 102027662 AGCD01028433;AGCD01028434;AGCD01028435;GBCQ01006507;XM_005386871;XM_005386872;XM_005386873;XM_005386874 XP_005386928;XP_005386929;XP_005386930;XP_005386931 MODEL 8845758 protein-coding LOC102011631 solute carrier family 40 member 1-like NW_004955410 25194888 25237636 - 102011631 AGCD01011145;GBDK01125549;XM_013510582 XP_013366036 MODEL 8967512 protein-coding Btg4 BTG anti-proliferation factor 4 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN maternal-to-zygotic transition of gene expression (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 8 (ortholog) NW_004955412 13137273 13250261 - 102013397 AGCD01012829;GBBH01185406;XM_005378059;XM_013511008;XM_013511009;XM_013511010;XM_013511011;XM_013511012;XM_013511014;XM_013511015;XM_013511016 XP_005378116;XP_013366462;XP_013366463;XP_013366464;XP_013366465;XP_013366466;XP_013366468;XP_013366469;XP_013366470 MODEL 8912779 protein-coding Grhl2 grainyhead like transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anterior neural tube closure (ortholog); bicellular tight junction assembly (ortholog); brain development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 28 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); membrane (ortholog); nucleoplasm (ortholog) NW_004955417 26401337 26533297 + 102010583 AGCD01018509;AGCD01018510;AGCD01018511;AGCD01018512;AGCD01018513;AGCD01018514;GBCE01152436;XM_005381919;XM_005381920;XM_005381921 XP_005381976;XP_005381977;XP_005381978 MODEL 8777360 protein-coding Atp6v1g3 ATPase H+ transporting V1 subunit G3 ENCODES a protein that exhibits ATPase binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955406 34910498 34927745 - 102029041 AGCD01006515;GBCC01042330;XM_005375134 XP_005375191 MODEL 9005735 protein-coding Cdh5 cadherin 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); BMP receptor binding (ortholog); cell-cell adhesion mediator activity (ortholog); INVOLVED IN adherens junction organization (ortholog); bicellular tight junction assembly (ortholog); blood vessel endothelial cell migration (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) NW_004955433 22957718 22994515 + 102019629 AGCD01031949;AGCD01031950;AGCD01031951;GBDJ01179589;XM_005388461 XP_005388518 MODEL 8719073 protein-coding Alkal2 ALK and LTK ligand 2 ENCODES a protein that exhibits cytokine activity (ortholog); receptor signaling protein tyrosine kinase activator activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); ovarian cancer (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955487 304019 312577 - 102005811 AGCD01059216;AGCD01059217;GBCB01076160;XM_005404337 XP_005404394 MODEL 8952635 protein-coding Gen1 GEN1 structure-specific endonuclease ENCODES a protein that exhibits 5'-flap endonuclease activity (ortholog); crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); positive regulation of mitotic cell cycle spindle assembly checkpoint (ortholog); regulation of centrosome duplication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955469 552850 590792 + 102007001 AGCD01052227;AGCD01052228;AGCD01052229;GBDJ01319147;XM_005400326;XM_005400328 XP_005400383;XP_005400385 MODEL 8838738 protein-coding Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit ENCODES a protein that exhibits identical protein binding (ortholog); tRNA (adenine(9)-N1)-methyltransferase activity (ortholog); tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial RNA 5'-end processing (ortholog); mitochondrial tRNA 3'-end processing (ortholog); mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 30 (ortholog); Developmental Disabilities (ortholog); Fatigue (ortholog); FOUND IN catalytic complex (ortholog); endoribonuclease complex (ortholog); mitochondrial matrix (ortholog) NW_004955427 3133225 3137070 + 102028659 AGCD01026918;GBCB01042255;XM_005386322;XM_005386323;XM_013515081 XP_005386379;XP_005386380;XP_013370535 MODEL 9024939 protein-coding LOC102012844 polycystic kidney disease protein 1-like 2 NW_004955413 408570 412526 + 102012844 AGCD01013464;GBDJ01203527;XM_005378678;XM_013511472 XP_005378735;XP_013366926 MODEL 39131876 rrna 5S_rRNA 5S ribosomal RNA 9006878 protein-coding Erp27 endoplasmic reticulum protein 27 ASSOCIATED WITH acute myeloid leukemia (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955413 11650920 11670127 - 102004050 AGCD01013966;GBCE01143801;XM_005379014;XM_013511584;XM_013511585 XP_005379071;XP_013367038;XP_013367039 MODEL 8712019 protein-coding Ift57 intraflagellar transport 57 INVOLVED IN apoptotic process (ortholog); heart looping (ortholog); left/right pattern formation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Breast Cancer, Familial (ortholog); BROWN SYNDROME (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955427 8814298 8871671 - 102013524 AGCD01027078;AGCD01027079;GBBH01033666;XM_005386354 XP_005386411 MODEL 8940451 protein-coding Agfg2 ArfGAP with FG repeats 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955573 337610 364845 - 102021813 AGCD01074975;AGCD01074976;GBCQ01002988;XM_005413722;XM_005413723;XM_005413724;XM_013509478;XM_013509479 XP_005413779;XP_005413780;XP_005413781;XP_013364932;XP_013364933 MODEL 8811549 protein-coding Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 ENCODES a protein that exhibits endopeptidase activity (ortholog); extracellular matrix binding (ortholog); heparin binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); defense response to bacterium (ortholog); endocardial cushion morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); degenerative disc disease (ortholog); Hepatomegaly (ortholog); FOUND IN extracellular region (ortholog) NW_004955407 26597165 26643972 - 102021943 AGCD01007531;GBDI01328672;XM_005375602;XM_005375603 XP_005375659;XP_005375660 MODEL 8874124 protein-coding Ilk integrin linked kinase ENCODES a protein that exhibits ATP binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH cardiomyopathy (ortholog); cervical cancer (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN axon (ortholog); cell-cell junction (ortholog); centrosome (ortholog) NW_004955414 22316243 22322979 + 102027399 AGCD01015452;GBDF01047463;XM_005380164 XP_005380221 MODEL 9060791 ncrna LOC102011220 uncharacterized LOC102011220 NW_004955425 27826699 27828785 - 102011220 AGCD01025989;GBDF01079916;XR_261178 MODEL 8771752 protein-coding LOC102009306 olfactory receptor 10AG1-like NW_004955511 845267 846223 - 102009306 AGCD01066345;XM_005408213 XP_005408270 MODEL 9038617 protein-coding Ankrd53 ankyrin repeat domain 53 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); positive regulation of microtubule polymerization (ortholog); regulation of mitotic cytokinesis (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN spindle (ortholog); spindle pole (ortholog) NW_004955424 14247070 14253072 - 102023820 AGCD01024648;GBDF01123101;XM_013514588 XP_013370042 MODEL 9033725 protein-coding Cd160 CD160 molecule ENCODES a protein that exhibits activating MHC class I receptor activity (ortholog); kinase binding (ortholog); MHC class I protein complex binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); mucosal immune response (ortholog); negative regulation of adaptive immune memory response (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955568 365700 372149 - 102008159 AGCD01074513;XM_013509328 XP_013364782 MODEL 8992308 ncrna LOC102005624 uncharacterized LOC102005624 NW_004955518 1052939 1058556 - 102005624 AGCD01067755;GBDF01055606;XR_001231850;XR_264561;XR_264562 MODEL 8932685 protein-coding Cactin cactin, spliceosome C complex subunit INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955495 5561359 5571945 - 102006364 AGCD01062014;GBDI01221201;XM_005405877 XP_005405934 MODEL 8938823 protein-coding Catsperb cation channel sperm associated auxiliary subunit beta ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); male infertility (ortholog); FOUND IN CatSper complex (ortholog); cilium (ortholog); sperm principal piece (ortholog) NW_004955438 13822642 13978777 - 102012246 AGCD01035313;AGCD01035314;AGCD01035315;AGCD01035316;AGCD01035317;AGCD01035318;AGCD01035319;AGCD01035320;AGCD01035321;AGCD01035322;AGCD01035323;AGCD01035324;AGCD01035325;AGCD01035326;GBDF01004774;XM_013517143;XM_013517144 XP_013372597;XP_013372598 MODEL 8862672 protein-coding Cep152 centrosomal protein 152 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955409 5121332 5210729 + 102024096 AGCD01009308;AGCD01009309;AGCD01009310;GBDF01160944;GBDF01194486;XM_013510301;XM_013510302;XM_013510303;XM_013510304;XM_013510305 XP_013365755;XP_013365756;XP_013365757;XP_013365758;XP_013365759 MODEL 8815259 protein-coding Cdh6 cadherin 6 INVOLVED IN female gonad development (ortholog); Notch signaling pathway (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH Cachexia (ortholog); clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cell junction (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955426 17187191 17316730 + 102018950 AGCD01026499;AGCD01026500;AGCD01026501;GBCE01162956;XM_005386145;XM_013515003;XM_013515004;XM_013515005 XP_005386202;XP_013370457;XP_013370458;XP_013370459 MODEL 8788360 pseudo LOC102006710 protein C3orf33 pseudogene NW_004955437 718511 719164 - 102006710 AGCD01034156 MODEL 8853259 protein-coding LOC102004573 protein-glutamine gamma-glutamyltransferase K NW_004955409 36071919 36100923 + 102004573 AGCD01010441;AGCD01010442;AGCD01010443;GBDI01026416;GBDK01309878;XM_005377020 XP_005377077 MODEL 8946942 pseudo LOC102008563 60S ribosomal protein L39-like NW_004955520 1054945 1055417 - 102008563 AGCD01068042 MODEL 8722625 protein-coding Echdc2 enoyl-CoA hydratase domain containing 2 ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955464 6284436 6300908 + 102015299 AGCD01050022;AGCD01050023;GBCE01047957;XM_005398567;XM_005398570;XM_013521720 XP_005398624;XP_005398627;XP_013377174 MODEL 8968950 protein-coding Aaas aladin WD repeat nucleoporin INVOLVED IN fertilization (ortholog); glutathione metabolic process (ortholog); learning (ortholog); ASSOCIATED WITH achalasia (ortholog); Breast Cancer, Familial (ortholog); genetic disease (ortholog); FOUND IN mitotic spindle (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955458 567487 577228 - 102019145 AGCD01047134;AGCD01047135;GBDF01011285;XM_005397171 XP_005397228 MODEL 8873335 protein-coding Dipk1b divergent protein kinase domain 1B ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog) NW_004955513 4120061 4123964 - 102025494 AGCD01066920;GBBH01186691;GBDJ01316687;XM_005408647 XP_005408704 MODEL 8804589 protein-coding Hspb2 heat shock protein family B (small) member 2 INVOLVED IN somatic muscle development (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 13628098 13631575 + 102024437 AGCD01012843;GBCE01145042;XM_005378099 XP_005378156 MODEL 8855631 protein-coding Ccdc60 coiled-coil domain containing 60 NW_004955455 11998223 12163986 - 102017097 AGCD01046027;AGCD01046028;AGCD01046029;AGCD01046030;AGCD01046031;AGCD01046032;GBDF01154387;XM_005396527 XP_005396584 MODEL 8803011 protein-coding Kcnk6 potassium two pore domain channel subfamily K member 6 ENCODES a protein that exhibits potassium channel activity (ortholog); INVOLVED IN negative regulation of systemic arterial blood pressure (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); regulation of lysosome size (ortholog); ASSOCIATED WITH brain infarction (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955468 1108025 1117366 - 102016577 AGCD01051756;AGCD01051757;GBBH01034366;XM_005399855 XP_005399912 MODEL 39133800 misc_rna 7SK 7SK RNA 9049342 protein-coding LOC102021829 HLA class I histocompatibility antigen, B-18 alpha chain-like NW_004955712 7998 9513 - 102021829 AGCD01078145;XM_013510181 XP_013365635 MODEL 8759565 ncrna LOC102003862 uncharacterized LOC102003862 NW_004955474 6739005 6740107 + 102003862 AGCD01054490;GBDF01162687;XR_263599 MODEL 8849920 pseudo LOC102011632 dnaJ homolog subfamily B member 6-like NW_004955410 15884222 15890903 + 102011632 AGCD01010941 MODEL 8982645 protein-coding Fcgbp Fc gamma binding protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog) NW_004955578 1131446 1169440 + 102021925 AGCD01075510;GBDK01133506;XM_005414081;XM_005414082 XP_005414138;XP_005414139 MODEL 8948317 protein-coding Eif3b eukaryotic translation initiation factor 3 subunit B ENCODES a protein that exhibits RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN IRES-dependent viral translational initiation (ortholog); regulation of translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) NW_004955460 12918349 12941150 - 102017750 AGCD01048664;GBDK01076722;XM_005397880 XP_005397937 MODEL 8935685 protein-coding LOC102007062 S-phase kinase-associated protein 1-like NW_004955445 2496144 2496743 - 102007062 AGCD01039356;XM_005392261 XP_005392318 MODEL 10383222 ncrna LOC106149951 uncharacterized LOC106149951 NW_004955458 13289765 13293713 - 106149951 AGCD01047796;GBDF01164666;XR_001236444 MODEL 8863978 protein-coding Cimip7 ciliary microtubule inner protein 7 NW_004955532 1163399 1172197 - 102011476 AGCD01070167;AGCD01070168;GBDF01051831;XM_013507577 XP_013363031 MODEL 8896071 protein-coding Jarid2 jumonji and AT-rich interaction domain containing 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); facultative heterochromatin formation (ortholog); gene expression (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN ESC/E(Z) complex (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955590 383810 512854 - 102026273 AGCD01076202;GBDI01264181;XM_005414590;XM_005414591;XM_013509963 XP_005414647;XP_005414648;XP_013365417 MODEL 9019832 pseudo LOC102008200 septin-2 pseudogene NW_004955463 231431 232195 - 102008200 AGCD01049478 MODEL 8922430 protein-coding Atp6v1h ATPase H+ transporting V1 subunit H ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN endocytosis (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog) NW_004955454 13099488 13213018 - 102004237 AGCD01045428;AGCD01045429;AGCD01045430;AGCD01045431;GBCE01095685;XM_005396063;XM_005396064;XM_005396065 XP_005396120;XP_005396121;XP_005396122 MODEL 8936567 protein-coding Get1 guided entry of tail-anchored proteins factor 1 INVOLVED IN otic vesicle development (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); GET complex (ortholog) NW_004955407 38160951 38168808 + 102022784 AGCD01007798;GBDF01120917;XM_005375768 XP_005375825 MODEL 8791288 pseudo LOC102017738 40S ribosomal protein S18 pseudogene NW_004955405 17787001 17787460 + 102017738 AGCD01005008;XR_259386 MODEL 8821152 pseudo LOC102010443 calnexin pseudogene NW_004955405 3150890 3152245 - 102010443 AGCD01004631 MODEL 9054170 protein-coding Erp29 endoplasmic reticulum protein 29 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); negative regulation of gene expression (ortholog); negative regulation of protein secretion (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955482 8572227 8579589 + 102006663 AGCD01057536;AGCD01057537;GBDF01045015;XM_005403185;XM_005403186 XP_005403242;XP_005403243 MODEL 39132120 rrna 5S_rRNA 5S ribosomal RNA 8755219 protein-coding Col5a3 collagen type V alpha 3 chain ENCODES a protein that exhibits heparin binding (ortholog); proteoglycan binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN collagen type V trimer (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955495 1347171 1386683 - 102026991 AGCD01061684;AGCD01061685;GBDI01224741;XM_005405578;XR_001231389 XP_005405635 MODEL 9034077 protein-coding Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif 6 INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); lymphoma (ortholog) NW_004955446 3620795 3902829 + 102021401 AGCD01040022;AGCD01040023;AGCD01040024;AGCD01040025;AGCD01040026;AGCD01040027;AGCD01040028;AGCD01040029;AGCD01040030;GBDF01114388;XM_005392632;XM_013518467 XP_005392689;XP_013373921 MODEL 8877912 pseudo LOC102009712 olfactory receptor 2S2-like NW_004955472 459622 466367 + 102009712 AGCD01053339 MODEL 8934635 pseudo LOC102011221 DNA-directed RNA polymerase II subunit RPB3 pseudogene NW_004955426 24102744 24103895 + 102011221 AGCD01026668 MODEL 39134375 misc_rna 7SK 7SK RNA 8983783 protein-coding Enox1 ecto-NOX disulfide-thiol exchanger 1 ENCODES a protein that exhibits NADH dehydrogenase activity (ortholog); protein disulfide isomerase activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955518 1124556 1677025 - 102006270 AGCD01067756;AGCD01067757;AGCD01067758;AGCD01067759;AGCD01067760;AGCD01067761;AGCD01067762;GBDF01088322;XM_005409058;XM_005409064;XM_005409068;XM_005409071;XM_013506963;XM_013506964;XM_013506965;XM_013506966;XM_013506967 XP_005409115;XP_005409121;XP_005409125;XP_005409128;XP_013362417;XP_013362418;XP_013362419;XP_013362420;XP_013362421 MODEL 8786768 protein-coding Btk Bruton tyrosine kinase ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN B cell affinity maturation (ortholog); B cell receptor signaling pathway (ortholog); cell maturation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Adenoviridae Infections (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 1 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955503 7483819 7515085 - 102026026 AGCD01064794;GBBH01034514;XM_005406951;XM_005406952 XP_005407008;XP_005407009 MODEL 9009220 protein-coding Grhl3 grainyhead like transcription factor 3 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN central nervous system development (ortholog); cochlea morphogenesis (ortholog); ectoderm development (ortholog); ASSOCIATED WITH anodontia (ortholog); cervical cancer (ortholog); cleft palate (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 4125792 4159699 + 102027376 AGCD01043963;GBDI01107923;XM_005394800;XM_013519744 XP_005394857;XP_013375198 MODEL 9004443 pseudo LOC102004574 tetratricopeptide repeat protein 37 pseudogene NW_004955409 17034095 17039090 + 102004574 AGCD01009758 MODEL 8754661 protein-coding Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of mitochondrial ATP synthesis coupled electron transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955456 8260533 8265488 - 102030499 AGCD01046465;GBDI01032492;XM_005396701 XP_005396758 MODEL 39133937 misc_rna 7SK 7SK RNA 8988336 protein-coding Echdc3 enoyl-CoA hydratase domain containing 3 ENCODES a protein that exhibits enoyl-CoA hydratase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); positive regulation of cellular response to insulin stimulus (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955421 27712527 27731141 + 102011128 AGCD01022288;AGCD01022289;GBCE01007605;GBDK01129491;XM_013513801 XP_013369255 MODEL 39131522 protein-coding DIPK1C divergent protein kinase domain 1C 8921746 protein-coding Ankrd54 ankyrin repeat domain 54 ENCODES a protein that exhibits protein kinase regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); positive regulation of erythrocyte differentiation (ortholog); regulation of intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); nucleus (ortholog) NW_004955413 24203653 24216702 - 102011426 AGCD01014356;GBCE01002318;XM_005379229 XP_005379286 MODEL 8733195 protein-coding Hspb3 heat shock protein family B (small) member 3 ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 4 (ortholog); spinal muscular atrophy (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955446 13113854 13114599 - 102023858 AGCD01040246;GBCB01056299;XM_005392716 XP_005392773 MODEL 8706351 ncrna LOC102005629 uncharacterized LOC102005629 NW_004955526 3115354 3136784 + 102005629 AGCD01069328;XR_264659 MODEL 8875385 protein-coding Trmt11 tRNA methyltransferase 11 ENCODES a protein that exhibits tRNA (guanine(10)-N2)-methyltransferase activity (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); methyltransferase complex (ortholog); mitochondrion (ortholog) NW_004955436 7274848 7318762 + 102004850 AGCD01033704;GBDI01353599;XM_005389162;XM_005389163;XM_013516690 XP_005389219;XP_005389220;XP_013372144 MODEL 8904475 pseudo LOC102004220 protein quaking-like NW_004955591 59735 61241 + 102004220 AGCD01076238;AGCD01076239 MODEL 8700923 protein-coding Kcnk7 potassium two pore domain channel subfamily K member 7 ASSOCIATED WITH colon adenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955422 19666974 19670449 + 102005052 AGCD01023026;GBCB01035404;XM_005384475 XP_005384532 MODEL 8760379 protein-coding Cacul1 CDK2 associated cullin domain 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of protein kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955431 23242959 23319440 - 102004841 AGCD01030532;AGCD01030533;AGCD01030534;GBDK01013599;XM_005387880;XM_005387881 XP_005387937;XP_005387938 MODEL 8919973 protein-coding LOC102021830 keratin-associated protein 3-1 NW_004955451 15429424 15430011 - 102021830 AGCD01043607;XM_005394380 XP_005394437 MODEL 8703225 protein-coding Alkbh1 alkB homolog 1, histone H2A dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent tRNA 5-methylcytidine formyltransferase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); INVOLVED IN DNA repair (ortholog); oxidative RNA demethylation (ortholog); positive regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 1531114 1556483 - 102019107 AGCD01034986;GBDK01361284;XM_005390212;XM_013517181 XP_005390269;XP_013372635 MODEL 39134376 misc_rna 7SK 7SK RNA 8805883 protein-coding Clybl citramalyl-CoA lyase ENCODES a protein that exhibits (S)-citramalyl-CoA lyase activity (ortholog); acyl-CoA hydrolase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN positive regulation of cobalamin metabolic process (ortholog); protein homotrimerization (ortholog); regulation of cobalamin metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955404 10813161 11016687 - 102019462 AGCD01003400;AGCD01003401;AGCD01003402;AGCD01003403;AGCD01003404;AGCD01003405;GBDJ01421558;XM_005374232 XP_005374289 MODEL 8882792 protein-coding LOC102006713 keratin, type II cuticular Hb1-like NW_004955547 2624360 2629144 + 102006713 AGCD01072287;GBDF01003670;XM_013508439 XP_013363893 MODEL 8986160 protein-coding LOC102012845 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10861527 10905757 - 102012845 AGCD01051587;GBCE01022349;XM_013522159;XM_013522160 XP_013377613;XP_013377614 MODEL 8976831 ncrna LOC102008564 uncharacterized LOC102008564 NW_004955523 46481 51442 + 102008564 AGCD01068431;GBBH01049104;XR_001231942;XR_264632 MODEL 8995399 protein-coding Cdh7 cadherin 7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colorectal Neoplasms (ortholog); lung cancer (ortholog) NW_004955402 49444814 49568653 + 102028483 AGCD01001229;AGCD01001230;AGCD01001231;GBCQ01181567;XM_005373040 XP_005373097 MODEL 8831853 protein-coding Ift74 intraflagellar transport 74 ENCODES a protein that exhibits beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); epidermis development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955472 7779705 7872423 - 102027292 AGCD01053629;AGCD01053630;AGCD01053631;AGCD01053632;AGCD01053633;GBDI01297180;XM_005401156 XP_005401213 MODEL 8866609 protein-coding Aggf1 angiogenic factor with G-patch and FHA domains 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955425 23847502 23873964 - 102018948 AGCD01025861;AGCD01025862;GBDI01125628;XM_005386032 XP_005386089 MODEL 8909570 ncrna LOC102009308 uncharacterized LOC102009308 NW_004955431 13033825 13037782 - 102009308 AGCD01030276;GBDF01225489;XR_001234590 MODEL 8886433 protein-coding Apopt1 apoptogenic 1, mitochondrial INVOLVED IN intrinsic apoptotic signaling pathway (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); positive regulation of cytochrome-c oxidase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); agammaglobulinemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN matrix side of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955538 2415781 2432742 + 102011243 AGCD01071125;GBDF01003006;XM_005410782 XP_005410839 MODEL 9036180 protein-coding Ilkap ILK associated serine/threonine phosphatase ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); regulation of nuclear cell cycle DNA replication (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955542 2391432 2407559 + 102015769 AGCD01071522;GBCQ01094302;GBDF01124379;XM_013508014 XP_013363468 MODEL 8837623 protein-coding Atp7a ATPase copper transporting alpha ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); blood vessel development (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anemia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955557 1355471 1515725 + 102020850 AGCD01073291;AGCD01073292;AGCD01073293;AGCD01073294;AGCD01073295;AGCD01073296;AGCD01073297;AGCD01073298;GBCB01002245;JN633747;XM_005412628;XM_005412629;XM_013508826 AEO95414;XP_005412685;XP_005412686;XP_013364280 MODEL 39132123 rrna 5S_rRNA 5S ribosomal RNA 8948031 protein-coding Lins1 lines homolog 1 INVOLVED IN cognition (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 27 (ortholog); bicuspid aortic valve disease (ortholog) NW_004955416 27585172 27609780 - 102007659 AGCD01017618;GBDK01117296;XM_005381639 XP_005381696 MODEL 8831437 protein-coding Erp44 endoplasmic reticulum protein 44 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); protein folding (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955419 25584404 25665590 + 102013936 AGCD01020388;AGCD01020389;GBCQ01063714;XM_005382816 XP_005382873 MODEL 8909982 protein-coding Cd164 CD164 molecule INVOLVED IN cell adhesion (ortholog); heterophilic cell-cell adhesion (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 66 (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog); plasma membrane (ortholog) NW_004955411 34423727 34439295 - 102023883 AGCD01012399;GBBH01000455;XM_013510816 XP_013366270 MODEL 9043169 protein-coding Col6a1 collagen type VI alpha 1 chain ENCODES a protein that exhibits collagen binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); adipose tissue development (ortholog); apoptotic nuclear changes (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnodactyly (ortholog); asthma (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955407 42461837 42479048 + 102015480 AGCD01007892;GBDJ01018240;XM_005375923 XP_005375980 MODEL 39133938 misc_rna 7SK 7SK RNA 8773479 ncrna LOC102011636 uncharacterized LOC102011636 NW_004955412 12761973 12776122 - 102011636 AGCD01012825;GBDF01277129;XR_001232873 MODEL 8773875 protein-coding Catsperd cation channel sperm associated auxiliary subunit delta INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955495 3663878 3711595 - 102006365 AGCD01061874;AGCD01061875;AGCD01061876;AGCD01061877;AGCD01061878;AGCD01061879;GBDF01045800;XM_005406146 XP_005406203 MODEL 8726924 protein-coding Eif3d eukaryotic translation initiation factor 3 subunit D ENCODES a protein that exhibits mRNA cap binding (ortholog); RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cap-dependent translational initiation (ortholog); formation of cytoplasmic translation initiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) NW_004955413 23096440 23110312 - 102020790 AGCD01014327;GBBH01030582;GBCE01030924;XM_013511591 XP_013367045 MODEL 9047679 protein-coding Fcgr2b Fc fragment of IgG receptor IIb ENCODES a protein that exhibits amyloid-beta binding (ortholog); IgG binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to amyloid-beta (ortholog); PARTICIPATES IN clathrin-mediated endocytosis pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); asthma (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); dendritic spine (ortholog) NW_004955462 14639396 14653801 - 102018697 AGCD01049453;GBDI01129457;XM_005398294;XM_005398296;XM_013521429;XM_013521430 XP_005398351;XP_005398353;XP_013376883;XP_013376884 MODEL 39131877 rrna 5S_rRNA 5S ribosomal RNA 8998931 protein-coding Cep162 centrosomal protein 162 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN axonemal microtubule (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955411 11661767 11727210 - 102016992 AGCD01011830;GBDK01397515;XM_005377697;XM_013510870;XM_013510871;XM_013510872 XP_005377754;XP_013366324;XP_013366325;XP_013366326 MODEL 10240862 ncrna LOC106149952 uncharacterized LOC106149952 NW_004955458 4169038 4171209 + 106149952 AGCD01047379;GBDI01045785;XR_001236445 MODEL 8886233 protein-coding Enox2 ecto-NOX disulfide-thiol exchanger 2 INVOLVED IN electron transport chain (ortholog); ultradian rhythm (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); disease of cellular proliferation (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955473 4123403 4455268 + 102004379 AGCD01053946;AGCD01053947;AGCD01053948;AGCD01053949;AGCD01053950;AGCD01053951;GBCE01168964;XM_005401229;XM_005401230;XM_005401231;XM_013523085 XP_005401286;XP_005401287;XP_005401288;XP_013378539 MODEL 8797119 protein-coding Cacybp calcyclin binding protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to calcium ion (ortholog); cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955406 14823509 14840127 + 102021845 AGCD01005971;AGCD01005972;AGCD01005973;AGCD01005974;GBCB01002196;XM_005375460 XP_005375517 MODEL 8930387 protein-coding Btla B and T lymphocyte associated ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); immune response-regulating cell surface receptor signaling pathway (ortholog); negative regulation of alpha-beta T cell proliferation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955427 12804467 12837178 - 102026657 AGCD01027226;AGCD01027227;GBDI01324577;XM_005386387 XP_005386444 MODEL 8828083 protein-coding Jazf1 JAZF zinc finger 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Endometrial Neoplasms (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog); transcription repressor complex (ortholog) NW_004955410 29446082 29583383 - 102010345 AGCD01011292;AGCD01011293;GBBH01135337;XM_013510615 XP_013366069 MODEL 8791037 ncrna LOC102008203 uncharacterized LOC102008203 NW_004955465 240199 264436 + 102008203 AGCD01050306;GBDF01083705;XR_001236725;XR_001236726;XR_001236727;XR_001236728;XR_001236729;XR_001236730;XR_263227 MODEL 8948074 ncrna LOC102010445 uncharacterized LOC102010445 NW_004955406 13995073 13998877 - 102010445 AGCD01005956;GBDJ01024864;XR_001236437 MODEL 8952098 protein-coding Aacs acetoacetyl-CoA synthetase ENCODES a protein that exhibits acetoacetate-CoA ligase activity (ortholog); short-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to cholesterol (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN ketone bodies metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955482 4663818 4694170 - 102008532 AGCD01057301;AGCD01057302;AGCD01057303;AGCD01057304;GBBH01139945;GBDF01051990;XM_005403000 XP_005403057 MODEL 8914794 protein-coding Acbd6 acyl-CoA binding domain containing 6 ENCODES a protein that exhibits enzyme activator activity (ortholog); fatty-acyl-CoA binding (ortholog); lipid binding (ortholog); INVOLVED IN protein myristoylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955406 19481640 19658807 - 102011275 AGCD01006082;AGCD01006083;AGCD01006084;AGCD01006085;AGCD01006086;AGCD01006087;GBDK01324069;XM_005374985;XM_013521346 XP_005375042;XP_013376800 MODEL 8977220 protein-coding Ccdc61 coiled-coil domain containing 61 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN centriole assembly (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); centriolar subdistal appendage (ortholog); centrosome (ortholog) NW_004955574 387070 423526 + 102024395 AGCD01075104;AGCD01075105;GBCQ01180477;GBDI01326858;XM_013509570 XP_013365024 MODEL 39133801 misc_rna 7SK 7SK RNA 8748262 protein-coding Dipk1c divergent protein kinase domain 1C ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN brain development (ortholog); dendritic spine development (ortholog); gene expression (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955402 57878727 57899315 - 102013364 AGCD01001513;GBCE01121416;GBDJ01269128;XM_005373180 XP_005373237 MODEL 8876276 protein-coding Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN cellular response to BMP stimulus (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) NW_004955450 525313 581006 + 102006186 AGCD01042339;GBCE01142109;XM_005393436;XM_013518885;XM_013518886;XM_013518887;XM_013518888;XM_013518890 XP_005393493;XP_013374339;XP_013374340;XP_013374341;XP_013374342;XP_013374344 MODEL 8839916 protein-coding LOC102011222 translation initiation factor IF-2-like NW_004955504 1462038 1467322 + 102011222 AGCD01064839;AGCD01064840;GBDI01357943;GBDK01076347;XM_013505915 XP_013361369 MODEL 8836743 protein-coding LOC102007067 laminin subunit alpha-3-like NW_004955402 12016293 12019255 + 102007067 AGCD01000337;XM_005372709 XP_005372766 MODEL 8855668 protein-coding Get3 guided entry of tail-anchored proteins factor 3, ATPase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein carrier activity (ortholog); INVOLVED IN tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Dilated Cardiomyopathy 2H (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); GET complex (ortholog) NW_004955415 31836294 31843046 + 102020559 AGCD01016698;GBDF01003381;XM_005381023 XP_005381080 MODEL 8777212 pseudo LOC102021831 bromodomain-containing protein 7-like NW_004955403 338651 341525 + 102021831 AGCD01001689 MODEL 8895369 pseudo LOC102009713 tubulin alpha-1 chain-like NW_004955415 27942717 27943523 - 102009713 AGCD01016636 MODEL 8726639 protein-coding Grhpr glyoxylate and hydroxypyruvate reductase ENCODES a protein that exhibits carboxylic acid binding (ortholog); glyoxylate reductase (NADPH) activity (ortholog); hydroxypyruvate reductase (NADH) activity (ortholog); INVOLVED IN dicarboxylic acid metabolic process (ortholog); glyoxylate metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); familial hypocalciuric hypercalcemia (ortholog); lymphoma (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) NW_004955419 29032591 29044046 - 102008319 AGCD01020484;GBDI01225270;XM_005382885 XP_005382942 MODEL 8996610 ncrna LOC102017739 uncharacterized LOC102017739 NW_004955452 16271314 16273308 + 102017739 AGCD01044504;XR_262702 MODEL 8942549 protein-coding Alkbh2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); cytosine C-5 DNA demethylase activity (ortholog); INVOLVED IN DNA alkylation repair (ortholog); ASSOCIATED WITH high grade glioma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 10258736 10265100 - 102030040 AGCD01045950;GBDJ01275521;XM_013520492 XP_013375946 MODEL 8751625 pseudo LOC102004575 F-box only protein 9 pseudogene NW_004955461 14590359 14591743 + 102004575 AGCD01049056 MODEL 8987314 protein-coding Enpep glutamyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); glutamyl aminopeptidase activity (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); angiotensin maturation (ortholog); cell migration (ortholog); PARTICIPATES IN angiotensin III signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955457 15863881 15943074 - 102023230 AGCD01047099;AGCD01047100;GBCQ01011653;XM_005397109 XP_005397166 MODEL 8954227 protein-coding LOC102003863 protocadherin beta-7 NW_004955415 12610873 12620570 - 102003863 AGCD01016207;AGCD01016208;XM_013512126 XP_013367580 MODEL 8800680 protein-coding Agk acylglycerol kinase ENCODES a protein that exhibits acylglycerol kinase activity (ortholog); ATP-dependent diacylglycerol kinase activity (ortholog); ceramide kinase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); lipid phosphorylation (ortholog); protein insertion into mitochondrial inner membrane (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); cataract 38 (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955494 1924026 2041914 - 102015858 AGCD01061429;AGCD01061430;AGCD01061431;AGCD01061432;AGCD01061433;AGCD01061434;GBCE01104960;XM_005405405;XM_005405406;XM_013504986;XM_013504987;XM_013504988 XP_005405462;XP_005405463;XP_013360440;XP_013360441;XP_013360442 MODEL 8916289 protein-coding App amyloid beta precursor protein ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); apolipoprotein binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcoholic hepatitis (ortholog); FOUND IN amyloid-beta complex (ortholog); apical part of cell (ortholog); astrocyte projection (ortholog) NW_004955407 25725259 25973582 - 102019139 AGCD01007516;AGCD01007517;AGCD01007518;AGCD01007519;AGCD01007520;AGCD01007521;GBCE01002176;JN633556;XM_005375592;XM_005375593;XM_005375594;XM_005375595;XM_005375597;XM_005375598 AEO95223;XP_005375649;XP_005375650;XP_005375651;XP_005375652;XP_005375654;XP_005375655 MODEL 8829910 protein-coding Ankrd55 ankyrin repeat domain 55 ASSOCIATED WITH acute myeloid leukemia (ortholog); Chloracne (ortholog); hepatocellular carcinoma (ortholog) NW_004955446 11622317 11713690 + 102013227 AGCD01040208;AGCD01040209;GBDJ01034588;XM_005392685;XM_005392686;XM_005392687 XP_005392742;XP_005392743;XP_005392744 MODEL 8771718 ncrna LOC102005636 uncharacterized LOC102005636 NW_004955542 148238 153369 + 102005636 AGCD01071458;AGCD01071459;GBDF01025206;XR_264850 MODEL 8922156 protein-coding Atp7b ATPase copper transporting beta ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN cellular detoxification of copper ion (ortholog); cellular response to copper ion (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); Anhaptoglobinemia (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955431 5228395 5297120 - 102005829 AGCD01030017;AGCD01030018;GBBH01116837;XM_005387611;XM_005387612;XM_005387614 XP_005387668;XP_005387669;XP_005387671 MODEL 8871916 protein-coding Cinp cyclin dependent kinase 2 interacting protein ENCODES a protein that exhibits preribosome binding (ortholog); INVOLVED IN DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); intellectual disability (ortholog); FOUND IN ATPase complex (ortholog); nucleus (ortholog) NW_004955538 1649068 1655146 - 102029794 AGCD01071078;GBDF01049565;GBDF01074102;XM_005410749 XP_005410806 MODEL 9028490 protein-coding Ccdc62 coiled-coil domain containing 62 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); cellular response to estradiol stimulus (ortholog); estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955482 5911233 5948178 - 102026008 AGCD01057357;GBDI01254213;XM_005403067;XM_005403068;XM_005403069;XM_005403070;XM_005403071;XM_005403072;XM_005403073 XP_005403124;XP_005403125;XP_005403126;XP_005403127;XP_005403128;XP_005403129;XP_005403130 MODEL 8866559 protein-coding Col6a2 collagen type VI alpha 2 chain ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN neuron apoptotic process (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to glucose (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); atrial fibrillation (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955407 42575677 42600967 + 102016562 AGCD01007894;GBDI01001309;XM_005375925;XM_005375927 XP_005375982;XP_005375984 MODEL 8839235 protein-coding Hspb6 heat shock protein family B (small) member 6 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); protein folding chaperone (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of angiogenesis (ortholog); protein folding (ortholog); ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); heart disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955468 2797076 2799589 + 102022805 AGCD01051838;GBCE01018933;XM_005399971 XP_005400028 MODEL 8974382 protein-coding Kcnk9 potassium two pore domain channel subfamily K member 9 ENCODES a protein that exhibits identical protein binding (ortholog); outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); negative regulation of aldosterone secretion (ortholog); potassium ion import across plasma membrane (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); plasma membrane (ortholog); synaptic vesicle (ortholog) NW_004955461 13406969 13476720 - 102022172 AGCD01049037;AGCD01049038;AGCD01049039;GBDF01285685;XM_005398049 XP_005398106 MODEL 39131878 rrna 5S_rRNA 5S ribosomal RNA 8864704 pseudo LOC102006714 prostaglandin E synthase 3 pseudogene NW_004955441 1043090 1044707 - 102006714 AGCD01036746 MODEL 8825194 protein-coding Eif3e eukaryotic translation initiation factor 3 subunit E ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of translation (ortholog); translational initiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) NW_004955417 30823555 30858975 - 102029513 AGCD01018630;AGCD01018631;AGCD01018632;AGCD01018633;GBCQ01034702;XM_005381967 XP_005382024 MODEL 8807236 protein-coding Catspere catsper channel auxiliary subunit epsilon ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN sperm end piece (ortholog); sperm midpiece (ortholog); sperm principal piece (ortholog) NW_004955406 7716831 7861390 + 102005994 AGCD01005774;AGCD01005775;AGCD01005776;AGCD01005777;AGCD01005778;AGCD01081638;GBDF01052108;XM_005374775;XM_013520364;XM_013520365;XM_013520368;XM_013520372;XM_013520373 XP_005374832;XP_013375818;XP_013375819;XP_013375822;XP_013375826;XP_013375827 MODEL 8713593 protein-coding Cmas cytidine monophosphate N-acetylneuraminic acid synthetase ENCODES a protein that exhibits N-acylneuraminate cytidylyltransferase activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); N-acetylneuraminate metabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955413 17575469 17596379 + 102020789 AGCD01014159;GBDJ01176956;XM_005379071 XP_005379128 MODEL 8935287 pseudo LOC102009717 cyclin-C-like NW_004955416 11195941 11196968 + 102009717 AGCD01017180;XR_260457 MODEL 8889531 protein-coding Ift80 intraflagellar transport 80 INVOLVED IN apoptotic process (ortholog); articular cartilage development (ortholog); bone development (ortholog); ASSOCIATED WITH Asphyxia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 2 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955448 10808940 10819655 - 102003296 AGCD01041503;GBCB01121051;XM_013518599 XP_013374053 MODEL 8876248 protein-coding Echs1 enoyl-CoA hydratase, short chain 1 ENCODES a protein that exhibits 3-hydroxypropionyl-CoA dehydratase activity (ortholog); enoyl-CoA hydratase activity (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); L-lysine catabolic process (ortholog); L-valine catabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955477 11012451 11021487 - 102005467 AGCD01055713;GBBH01061217;XM_005402067;XM_005402068 XP_005402124;XP_005402125 MODEL 8833726 ncrna LOC102010449 uncharacterized LOC102010449 NW_004955408 9399013 9409596 + 102010449 AGCD01008249;GBDF01235295;XR_259676 MODEL 9040485 pseudo LOC102017740 methylosome subunit pICln-like NW_004955452 6163421 6165157 + 102017740 AGCD01044092 MODEL 8758048 protein-coding Aadacl2 arylacetamide deacetylase like 2 NW_004955448 2793842 2823083 + 102004868 AGCD01041290;GBCC01015414;XM_013518580 XP_013374034 MODEL 8836628 protein-coding Errfi1 ERBB receptor feedback inhibitor 1 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN apoptotic process (ortholog); bile acid biosynthetic process (ortholog); cartilage development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955486 4941143 4955693 + 102030200 AGCD01059072;AGCD01059073;GBCE01052630;XM_005404060 XP_005404117 MODEL 39133802 misc_rna 7SK 7SK RNA 8823812 protein-coding LOC102004222 zinc finger protein 75D-like NW_004955602 279198 334998 + 102004222 AGCD01076768;AGCD01076769;AGCD01076770;AGCD01076771;AGCD01076772;AGCD01076773;AGCD01076774;AGCD01076775;AGCD01076776;GBDF01124561;XM_005414830;XM_005414831 XP_005414887;XP_005414888 MODEL 9012504 pseudo LOC102011641 uracil-DNA glycosylase pseudogene NW_004955413 26353261 26357509 - 102011641 AGCD01014435;XM_005379326;XM_005379327 MODEL 8758783 ncrna LOC102007069 uncharacterized LOC102007069 NW_004955402 22117994 22162557 - 102007069 AGCD01000599;AGCD01000600;AGCD01000601;AGCD01000602;GBBH01029920;XR_259062 MODEL 8922533 pseudo LOC102011225 olfactory receptor 1013-like NW_004955511 1812470 1813401 + 102011225 AGCD01066380 MODEL 8758096 protein-coding Chchd3 coiled-coil-helix-coiled-coil-helix domain containing 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN cristae formation (ortholog); inner mitochondrial membrane organization (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); MICOS complex (ortholog); mitochondrial inner membrane (ortholog) NW_004955410 34818660 35093398 + 102006105 AGCD01011405;AGCD01011406;AGCD01011407;AGCD01011408;AGCD01011409;GBDJ01138148;XM_005377542;XM_013510637 XP_005377599;XP_013366091 MODEL 8946459 protein-coding Fcgrt Fc gamma receptor and transporter ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); IgG binding (ortholog); peptide antigen binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endosome membrane (ortholog); plasma membrane (ortholog) NW_004955559 1320441 1331962 - 102013122 AGCD01073640;GBDJ01017253;XM_005412869 XP_005412926 MODEL 8729716 protein-coding Cdh8 cadherin 8 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); regulation of synapse organization (ortholog); response to cold (ortholog); ASSOCIATED WITH brain edema (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); synaptic cleft (ortholog) NW_004955433 18737715 19094202 - 102017266 AGCD01031855;AGCD01031856;AGCD01031857;AGCD01031858;AGCD01031859;GBCE01178021;XM_005388456;XM_005388457;XM_005388458 XP_005388513;XP_005388514;XP_005388515 MODEL 8819169 protein-coding Cep164 centrosomal protein 164 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary transition fiber (ortholog) NW_004955412 18627023 18695685 + 102028173 AGCD01012945;GBDI01291763;XM_005378211;XM_005378212;XM_005378213;XM_005378215;XM_005378216;XM_005378217;XM_013511149;XM_013511151 XP_005378268;XP_005378269;XP_005378270;XP_005378272;XP_005378273;XP_005378274;XP_013366603;XP_013366605 MODEL 8842478 protein-coding Trmt112 tRNA methyltransferase activator subunit 11-2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein methyltransferase activity (ortholog); tRNA methyltransferase activator activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); rRNA methylation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); methyltransferase complex (ortholog) NW_004955422 20767599 20768505 + 102012548 AGCD01023086;GBDF01007908;XM_005384605 XP_005384662 MODEL 39132125 rrna 5S_rRNA 5S ribosomal RNA 8960366 pseudo LOC102004578 insulin-like peptide INSL6 NW_004955463 1887844 1902130 + 102004578 AGCD01049528 MODEL 39133939 misc_rna 7SK 7SK RNA 39131428 protein-coding CD164 CD164 molecule 39131380 protein-coding IFT80 intraflagellar transport 80 8703205 protein-coding Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of protein localization to nucleus (ortholog); negative regulation of tumor necrosis factor production (ortholog); ASSOCIATED WITH lung cancer (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955437 2697998 2769998 - 102018326 AGCD01034284;AGCD01034285;GBDF01007654;GBDK01126877;XM_005389532 XP_005389589 MODEL 8717792 protein-coding Dipk2a divergent protein kinase domain 2A INVOLVED IN cardiac muscle cell proliferation (ortholog); negative regulation of smooth muscle cell apoptotic process (ortholog); positive regulation of protein kinase C activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); extracellular region (ortholog) NW_004955508 1954600 1975842 - 102008647 AGCD01065777;GBCE01030452;XM_005407727 XP_005407784 MODEL 9047257 protein-coding Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif 8 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Moebius syndrome (ortholog) NW_004955412 31295436 31336781 - 102005788 AGCD01013334;AGCD01013335;AGCD01013336;GBBH01073135;GBDJ01220127;XM_013510983 XP_013366437 MODEL 8911227 pseudo LOC102008568 ubiquitin-protein ligase E3C-like NW_004955532 1668535 1681482 + 102008568 AGCD01070197 MODEL 39134377 misc_rna 7SK 7SK RNA 8894367 protein-coding LOC102004225 PRAME family member 3-like NW_004955615 103500 106083 - 102004225 AGCD01077249;XM_005414980 XP_005415037 MODEL 8857598 protein-coding LOC102012851 late histone H2B.L4-like NW_004955413 862577 885893 - 102012851 AGCD01013492;AGCD01013493;GBDI01162044;XM_013511494 XP_013366948 MODEL 8865998 ncrna LOC102021832 uncharacterized LOC102021832 NW_004955404 13372937 13378332 - 102021832 AGCD01003484;GBDF01277117;XR_259308 MODEL 8930924 protein-coding Ccdc63 coiled-coil domain containing 63 INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955482 7673495 7707065 + 102027410 AGCD01057486;AGCD01057487;AGCD01057488;GBBH01094342;XM_005403166;XM_005403167 XP_005403223;XP_005403224 MODEL 8801529 protein-coding Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ENCODES a protein that exhibits actin binding (ortholog); calcium-activated potassium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN adult walking behavior (ortholog); blood vessel diameter maintenance (ortholog); cell maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Ataxia (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); cytoplasm (ortholog) NW_004955437 14749808 15457274 + 102023523 AGCD01034679;AGCD01034680;AGCD01034681;AGCD01034682;AGCD01034683;AGCD01034684;AGCD01034685;AGCD01034686;AGCD01034687;AGCD01034688;AGCD01034689;GBBH01047842;GBCB01074602;XM_005389908;XM_013517024 XP_005389965;XP_013372478 MODEL 39131879 rrna 5S_rRNA 5S ribosomal RNA 8893553 ncrna LOC102006718 uncharacterized LOC102006718 NW_004955443 8651958 8680827 - 102006718 AGCD01038333;GBDF01053223;XR_001235434;XR_001235435;XR_001235436;XR_001235437;XR_001235438;XR_001235439;XR_262189;XR_262190 MODEL 8889748 pseudo LOC102009309 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955514 3732965 3733577 - 102009309 AGCD01067111 MODEL 8856266 protein-coding Lipa lipase A, lysosomal acid type ENCODES a protein that exhibits lipase activity (ortholog); sterol ester esterase activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); adaptive thermogenesis (ortholog); adipose tissue development (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH cholesterol ester storage disease (ortholog); coronary artery disease (ortholog); COVID-19 (ortholog); FOUND IN lysosome (ortholog) NW_004955425 3718291 3755942 + 102017893 AGCD01025295;AGCD01025296;GBDJ01138736;XM_005385854;XM_005385855 XP_005385911;XP_005385912 MODEL 8810417 ncrna LOC102008204 uncharacterized LOC102008204 NW_004955412 4776167 4820984 - 102008204 AGCD01012604;AGCD01012605;AGCD01012606;GBDF01156686;XR_001232850;XR_001232851;XR_259970;XR_259971 MODEL 9014651 ncrna LOC102009719 uncharacterized LOC102009719 NW_004955482 6560784 6566698 + 102009719 AGCD01057403;GBDF01126264;XR_001230965 MODEL 9008904 protein-coding Jcad junctional cadherin 5 associated INVOLVED IN positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); coronary artery disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955429 21954274 22038953 + 102019936 AGCD01029015;AGCD01029016;GBDJ01403706;XM_013515499;XR_001234529;XR_001234530;XR_001234531;XR_001234532;XR_001234533;XR_001234534;XR_001234535 XP_013370953 MODEL 9037394 protein-coding Cmbl carboxymethylenebutenolidase homolog ENCODES a protein that exhibits hydrolase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955426 146749 166922 - 102003262 AGCD01025996;AGCD01025997;GBCQ01011783;XM_005386113;XM_005386114;XM_005386115;XM_005386116;XM_013515024 XP_005386170;XP_005386171;XP_005386172;XP_005386173;XP_013370478 MODEL 8880027 protein-coding Gria1 glutamate ionotropic receptor AMPA type subunit 1 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to amine stimulus (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; Reelin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN neuronal cell body; AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog) NW_004955408 7912223 8226241 + 102026397 AGCD01008209;AGCD01008210;AGCD01008211;AGCD01008212;AGCD01008213;AGCD01008214;GBDJ01377186;XM_005376179;XM_005376180;XM_005376183;XM_005376185 XP_005376236;XP_005376237;XP_005376240;XP_005376242 MODEL 8824583 protein-coding Ankrd6 ankyrin repeat domain 6 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955411 16206819 16358322 + 102007415 AGCD01011970;AGCD01011971;AGCD01011972;AGCD01011973;GBDF01040122;XM_005377752;XM_005377754;XM_005377757;XM_013510762;XM_013510763;XM_013510764;XM_013510765;XM_013510766;XM_013510767;XM_013510768 XP_005377809;XP_005377811;XP_005377814;XP_013366216;XP_013366217;XP_013366218;XP_013366219;XP_013366220;XP_013366221;XP_013366222 MODEL 8970853 protein-coding Eif3f eukaryotic translation initiation factor 3 subunit F ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); identical protein binding (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN IRES-dependent viral translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 67 (ortholog); cervical cancer (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog); synapse (ortholog) NW_004955414 23805406 23812776 + 102013924 AGCD01015527;GBDI01018381;XM_005380208 XP_005380265 MODEL 8934261 protein-coding Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ENCODES a protein that exhibits aspartate carbamoyltransferase activity (ortholog); carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (ortholog); dihydroorotase activity (ortholog); INVOLVED IN 'de novo' CTP biosynthetic process (ortholog); 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); 'de novo' UMP biosynthetic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; beta-ureidopropionase deficiency pathway; Canavan disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell projection (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955469 9203433 9227526 + 102023574 AGCD01052496;AGCD01052497;GBBH01101491;XM_005400467;XM_005400468;XM_005400469;XM_005400470;XM_013522640 XP_005400524;XP_005400525;XP_005400526;XP_005400527;XP_013378094 MODEL 9066476 protein-coding Acbd7 acyl-CoA binding domain containing 7 INVOLVED IN energy homeostasis (ortholog); G protein-coupled receptor signaling pathway (ortholog); gene expression (ortholog) NW_004955429 19367352 19372358 + 102004839 AGCD01028949;AGCD01028950;GBDF01002478;XM_005387146;XM_005387147 XP_005387203;XP_005387204 MODEL 8977734 protein-coding Cdh9 cadherin 9 ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); identical protein binding (ortholog); INVOLVED IN synapse assembly (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955426 13702357 13841177 - 102016294 AGCD01026366;AGCD01026367;AGCD01026368;AGCD01026369;AGCD01026370;AGCD01026371;AGCD01026372;AGCD01026373;XM_005386143 XP_005386200 MODEL 8967950 protein-coding Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); ATP binding (ortholog); ATP diphosphatase activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate metabolic process (ortholog); adipose tissue development (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN insulin signaling pathway; niacin metabolic pathway; pantothenic acid metabolic pathway; ASSOCIATED WITH Aortic Calcification (ortholog); aortic valve disease 1 (ortholog); arterial calcification of infancy (ortholog); FOUND IN apical dendrite (ortholog); basal dendrite (ortholog); basolateral plasma membrane (ortholog) NW_004955436 12416147 12477214 + 102030663 AGCD01033841;GBCE01001596;GBDJ01419766;XM_013516652 XP_013372106 MODEL 39132127 rrna 5S_rRNA 5S ribosomal RNA 8711849 protein-coding LOC102003870 eotaxin ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN actin filament organization (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); allergic conjunctivitis (ortholog); allergic disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955481 9017930 9020436 + 102003870 AGCD01057092;GBDF01030595;XM_005402838 XP_005402895 MODEL 8938524 protein-coding Eci1 enoyl-CoA delta isomerase 1 ENCODES a protein that exhibits delta(3)-delta(2)-enoyl-CoA isomerase activity (ortholog); identical protein binding (ortholog); intramolecular oxidoreductase activity, transposing C=C bonds (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955442 15010412 15027014 + 102025730 AGCD01037854;GBDK01024970;XM_005391434 XP_005391491 MODEL 8946519 protein-coding Cip2a cellular inhibitor of PP2A ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN broken chromosome clustering (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955427 9448102 9480729 - 102017796 AGCD01027101;GBDF01047827;XM_005386362;XM_013515128 XP_005386419;XP_013370582 MODEL 8860751 protein-coding LOC102010451 olfactory receptor 1361-like NW_004955408 1580644 1581941 + 102010451 AGCD01007965;XM_005376561 XP_005376618 MODEL 8907185 pseudo LOC102017743 UPF0160 protein MYG1, mitochondrial pseudogene NW_004955454 2036921 2037774 + 102017743 AGCD01045001 MODEL 39133803 misc_rna 7SK 7SK RNA 9033653 protein-coding LOC102005637 cytochrome c oxidase subunit 8C, mitochondrial FOUND IN mitochondrion (ortholog) NW_004955438 15480509 15481812 + 102005637 AGCD01035370;GBDF01049097;XM_005390345 XP_005390402 MODEL 8885463 protein-coding Appbp2 amyloid beta precursor protein binding protein 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of beige fat cell differentiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasmic vesicle membrane (ortholog); membrane (ortholog) NW_004955451 1736742 1804776 - 102007840 AGCD01042981;AGCD01042982;AGCD01042983;AGCD01042984;AGCD01042985;AGCD01042986;AGCD01042987;GBDJ01006787;XM_005393963 XP_005394020 MODEL 8810238 protein-coding Esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine acetylation (ortholog); post-translational protein acetylation (ortholog); regulation of DNA replication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955402 10207621 10257363 - 102027027 AGCD01000252;AGCD01000253;AGCD01000254;GBCQ01174846;XM_013520167;XM_013520204;XM_013520246;XR_001236265;XR_001236273;XR_001236282 XP_013375621;XP_013375658;XP_013375700 MODEL 8748679 protein-coding ATP8 ATP synthase F0 subunit 8 MT 7771 7974 + 15822228 JX312692 AFQ55781;YP_008080749 REVIEWED 8992464 protein-coding Get4 guided entry of tail-anchored proteins factor 4 ENCODES a protein that exhibits protein carrier activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN ERAD pathway (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN BAT3 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955460 8620913 8634778 + 102013256 AGCD01048528;GBCB01004484;XM_005397792 XP_005397849 MODEL 8986127 pseudo LOC102011642 ras-related protein Rab-5A pseudogene NW_004955468 5230636 5231184 + 102011642 AGCD01051959 MODEL 9020458 protein-coding Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); cilium assembly (ortholog); cornea development in camera-type eye (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) NW_004955517 1302560 1443708 + 102029105 AGCD01067596;AGCD01067597;AGCD01067598;GBBH01004780;GBDJ01010259;XM_013506939 XP_013362393 MODEL 8877950 protein-coding Ilvbl ilvB acetolactate synthase like INVOLVED IN fatty acid alpha-oxidation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955495 8130875 8140152 + 102011677 AGCD01062185;GBDI01187952;XM_005406091;XM_005406093;XM_005406094 XP_005406148;XP_005406150;XP_005406151 MODEL 8728094 protein-coding Hspb7 heat shock protein family B (small) member 7 ENCODES a protein that exhibits filamin binding (ortholog); ASSOCIATED WITH Moebius syndrome (ortholog); stomach cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955527 2219462 2222824 + 102006277 AGCD01069425;GBCB01004969;XM_005409852 XP_005409909 MODEL 10207427 ncrna LOC106149953 uncharacterized LOC106149953 NW_004955458 276608 281685 - 106149953 AGCD01047116;GBDF01116207;XR_001236446;XR_001236447 MODEL 8878660 protein-coding Col6a3 collagen type VI alpha 3 chain INVOLVED IN neuron apoptotic process (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to glucose (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); arthrogryposis multiplex congenita (ortholog); asthma (ortholog); FOUND IN collagen trimer (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955542 2869183 2950569 + 102009762 AGCD01071541;GBCE01033024;XM_005411233;XM_005411235;XM_005411236;XM_005411237;XM_013508116 XP_005411290;XP_005411292;XP_005411293;XP_005411294;XP_013363570 MODEL 8876350 pseudo LOC102007072 60S ribosomal protein L5-like NW_004955450 3079256 3080465 - 102007072 AGCD01042421 MODEL 8957254 protein-coding LOC102011226 olfactory receptor 10AG1-like NW_004955511 918179 920370 - 102011226 AGCD01066346;XM_005408217 XP_005408274 MODEL 8963385 protein-coding Btn1a1 butyrophilin subfamily 1 member A1 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog) NW_004955483 392749 409947 - 102012199 AGCD01057609;GBCB01025102;XM_005403280;XM_005403281;XM_005403282;XM_005403283;XM_005403284;XM_013503766 XP_005403337;XP_005403338;XP_005403339;XP_005403340;XP_005403341;XP_013359220 MODEL 8708546 protein-coding Catsperg cation channel sperm associated auxiliary subunit gamma ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955468 1056197 1099804 - 102016464 AGCD01051749;AGCD01051750;AGCD01051751;AGCD01051752;AGCD01051753;AGCD01051754;AGCD01051755;AGCD01051756;GBDF01008471;GBDI01315833;XM_013522464 XP_013377918 MODEL 8841963 protein-coding Fcho1 FCH and mu domain containing endocytic adaptor 1 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); positive regulation of T cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cytosol (ortholog) NW_004955524 3451204 3470163 - 102013330 AGCD01068899;AGCD01068900;AGCD01068901;GBBH01207271;XM_005409537;XM_005409542;XM_013507319;XM_013507320;XM_013507321 XP_005409594;XP_005409599;XP_013362773;XP_013362774;XP_013362775 MODEL 8776278 protein-coding Ccdc65 coiled-coil domain containing 65 INVOLVED IN brain development (ortholog); cell population proliferation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955500 7733054 7744135 + 102009296 AGCD01063943;AGCD01063944;GBDF01214263;XM_005406671;XM_005406672;XM_013505645 XP_005406728;XP_005406729;XP_013361099 MODEL 8748612 protein-coding Cep170 centrosomal protein 170 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955406 6588504 6695246 - 102029148 AGCD01005755;AGCD01005756;GBDF01000468;XM_005374763;XM_005374769;XM_005374770;XM_013520258;XM_013520265;XM_013520267;XM_013520272;XM_013520283;XM_013520287;XM_013520296;XM_013520297;XM_013520302 XP_005374820;XP_005374826;XP_005374827;XP_013375712;XP_013375719;XP_013375721;XP_013375726;XP_013375737;XP_013375741;XP_013375750;XP_013375751;XP_013375756 MODEL 8771072 pseudo LOC102009311 mitochondrial fission factor pseudogene NW_004955516 2393052 2393940 - 102009311 AGCD01067455 MODEL 8881412 protein-coding Lipc lipase C, hepatic type ENCODES a protein that exhibits acetylesterase activity (ortholog); acyltransferase activity (ortholog); apolipoprotein binding (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to hormone stimulus (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Albuminuria (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular region (ortholog) NW_004955450 15947869 16062449 - 102016439 AGCD01042826;AGCD01042827;AGCD01042828;AGCD01042829;GBCE01092534;XM_005393838;XM_005393839;XM_005393840 XP_005393895;XP_005393896;XP_005393897 MODEL 8881799 ncrna LOC102004579 uncharacterized LOC102004579 NW_004955411 7502512 7517533 - 102004579 AGCD01011707;GBDF01254531;XR_001232795;XR_259925 MODEL 8753406 protein-coding LOC102008206 olfactory receptor 2B6-like NW_004955465 13463709 13464717 + 102008206 AGCD01050609;XM_005398954 XP_005399011 MODEL 8964952 protein-coding Aadacl3 arylacetamide deacetylase like 3 NW_004955486 577468 586176 - 102019602 AGCD01058861;GBDF01183065;XM_005403938 XP_005403995 MODEL 8799862 protein-coding Cd164l2 CD164 molecule like 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004956163 1090 5032 - 102010439 AGCD01079162;GBDJ01298212;XM_005415173;XM_005415174;XM_013510222 XP_005415230;XP_005415231;XP_013365676 MODEL 8959018 protein-coding Dipk2b divergent protein kinase domain 2B ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955516 3041112 3081740 + 102029321 AGCD01067480;AGCD01067481;GBDK01237416;XM_005408985;XM_013506933 XP_005409042;XP_013362387 MODEL 39134200 misc_rna 7SK 7SK RNA 8779019 protein-coding LOC102004229 leukocyte immunoglobulin-like receptor subfamily A member 6 NW_004957048 669 1949 - 102004229 AGCD01080444;GBCE01054558;GBDJ01017271;XM_013510242 XP_013365696 MODEL 8869252 protein-coding Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cellular response to oxidative stress (ortholog); mitochondrial DNA repair (ortholog); PARTICIPATES IN intermembrane space assembly pathway of mitochondrial protein import; ASSOCIATED WITH brain disease (ortholog); Breast Cancer, Familial (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955429 16911392 16921353 - 102003166 AGCD01028841;GBDK01285086;XM_005387058 XP_005387115 MODEL 8790775 pseudo LOC102021837 POU domain, class 5, transcription factor 1-like NW_004955405 15556055 15559935 - 102021837 AGCD01004948 MODEL 8699634 ncrna LOC102006723 uncharacterized LOC102006723 NW_004955576 651455 652726 - 102006723 AGCD01075304;GBDF01286939;XR_265073 MODEL 8975208 protein-coding Agl amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase ENCODES a protein that exhibits 4-alpha-glucanotransferase activity (ortholog); amylo-alpha-1,6-glucosidase activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen degradation pathway; glycogen storage disease type III pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); inclusion body (ortholog) NW_004955435 4622142 4684439 + 102030231 AGCD01032838;AGCD01032839;GBCB01003861;GBCQ01179765;XM_013516512 XP_013371966 MODEL 8769122 protein-coding Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN cellular response to bile acid (ortholog); cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Diastolic Hypertension, Resistance to (ortholog); Experimental Diabetes Mellitus (ortholog); hypertension (ortholog); FOUND IN membrane (ortholog); neuronal cell body (ortholog); somatodendritic compartment (ortholog) NW_004955408 23306286 23335170 - 102017956 AGCD01008588;GBDJ01089926;XM_005376319;XM_005376320;XM_013509223;XM_013509231 XP_005376376;XP_005376377;XP_013364677;XP_013364685 MODEL 9050663 protein-coding Trmt13 tRNA methyltransferase 13 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955435 4885910 4902759 + 102022535 AGCD01032861;GBDF01002213;GBDJ01075836;XM_013516438 XP_013371892 MODEL 8919256 protein-coding Jchain joining chain of multimeric IgA and IgM ENCODES a protein that exhibits IgA binding (ortholog); immunoglobulin receptor binding (ortholog); peptidoglycan binding (ortholog); INVOLVED IN adaptive immune response (ortholog); glomerular filtration (ortholog); innate immune response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN dimeric IgA immunoglobulin complex (ortholog); extracellular region (ortholog); hexameric IgM immunoglobulin complex (ortholog) NW_004955447 2292387 2321596 + 102024064 AGCD01040538;GBCQ01127862;XM_005392781;XM_005392783 XP_005392838;XP_005392840 MODEL 39133940 misc_rna 7SK 7SK RNA 8705467 protein-coding Alkbh3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); cytosine C-5 DNA demethylase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA alkylation repair (ortholog); negative regulation of cytoplasmic translation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 3660504 3695352 - 102024809 AGCD01022526;AGCD01022527;GBCB01024527;XM_005384082;XM_005384083 XP_005384139;XP_005384140 MODEL 8935205 pseudo LOC102008572 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955439 2667966 2668976 - 102008572 AGCD01035656 MODEL 8844858 protein-coding Eci2 enoyl-CoA delta isomerase 2 ENCODES a protein that exhibits delta(3)-delta(2)-enoyl-CoA isomerase activity (ortholog); intramolecular oxidoreductase activity, transposing C=C bonds (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); fatty acid catabolic process (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955465 9297794 9314409 + 102011850 AGCD01050489;GBDF01083468;XM_005398889;XM_005398891;XM_013521837 XP_005398946;XP_005398948;XP_013377291 MODEL 8929285 protein-coding Gria2 glutamate ionotropic receptor AMPA type subunit 2 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to amine stimulus (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic rhinitis (ortholog); amphetamine abuse (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog); axon (ortholog) NW_004955471 9970396 10108871 - 102011196 AGCD01053222;AGCD01053223;AGCD01053224;AGCD01053225;AGCD01053226;GBDF01254377;XM_005400940;XM_005400941;XM_005400942;XM_005400943;XR_001237063 XP_005400997;XP_005400998;XP_005400999;XP_005401000 MODEL 8847297 protein-coding Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955430 6986977 7018938 + 102014270 AGCD01029331;GBCB01040671;GBDJ01235305;XM_005387408 XP_005387465 MODEL 8934086 protein-coding LOC102012852 olfactory receptor 52K1-like NW_004955414 19929257 19930261 - 102012852 AGCD01015343;XM_005380042 XP_005380099 MODEL 8761390 protein-coding LOC102011647 olfactory receptor 52B2-like NW_004955414 21925278 21926526 - 102011647 AGCD01015437;XM_013511699 XP_013367153 MODEL 39131881 rrna 5S_rRNA 5S ribosomal RNA 8813963 protein-coding Immp1l inner mitochondrial membrane peptidase subunit 1 PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955476 9784838 9850076 - 102025906 AGCD01055397;AGCD01055398;AGCD01055399;AGCD01055400;GBCQ01044833;XM_005401775;XM_005401776;XM_005401778;XM_005401779;XM_005401780;XM_013502937 XP_005401832;XP_005401833;XP_005401835;XP_005401836;XP_005401837;XP_013358391 MODEL 8852543 ncrna LOC102007073 uncharacterized LOC102007073 NW_004955450 13276074 13290515 - 102007073 AGCD01042733;GBDF01306692;XR_262551;XR_262552 MODEL 9014656 protein-coding LOC102009720 olfactory receptor 2AJ1-like NW_004955418 30036459 30037427 - 102009720 AGCD01019499;XM_005382364 XP_005382421 MODEL 8906453 protein-coding Col6a6 collagen type VI alpha 6 chain ASSOCIATED WITH cervical cancer (ortholog); congenital myopathy (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955501 7683344 7816859 - 102014691 AGCD01064221;AGCD01064222;AGCD01064223;GBDJ01421649;XM_005406861;XM_013505758;XM_013505759;XM_013505760 XP_005406918;XP_013361212;XP_013361213;XP_013361214 MODEL 8820980 protein-coding Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); calcium ion binding (ortholog); D-type glycerophospholipase activity (ortholog); INVOLVED IN cell chemotaxis (ortholog); cellular response to cadmium ion (ortholog); cellular response to estradiol stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Birth Weight (ortholog); Cadmium Poisoning (ortholog); FOUND IN extracellular region (ortholog) NW_004955417 25308424 25384307 - 102007119 AGCD01018478;AGCD01018479;GBCE01135046;XM_005381910;XM_005381911;XM_005381912;XM_013512836 XP_005381967;XP_005381968;XP_005381969;XP_013368290 MODEL 8798974 protein-coding Cdhr1 cadherin related family member 1 INVOLVED IN photoreceptor cell maintenance (ortholog); photoreceptor cell morphogenesis (ortholog); photoreceptor cell outer segment organization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 12 (ortholog); FOUND IN photoreceptor outer segment membrane (ortholog); plasma membrane (ortholog) NW_004955510 3709206 3727448 + 102004407 AGCD01066247;GBCE01021262;XM_005407882 XP_005407939 MODEL 9032302 protein-coding Ccdc66 coiled-coil domain containing 66 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); cilium disassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); centriolar satellite (ortholog); centrosome (ortholog) NW_004955430 6402622 6440154 + 102009972 AGCD01029290;AGCD01029291;AGCD01029292;GBDK01232533;XM_005387392;XM_005387394;XM_005387396;XM_005387397;XM_013515615 XP_005387449;XP_005387451;XP_005387453;XP_005387454;XP_013371069 MODEL 39132128 rrna 5S_rRNA 5S ribosomal RNA 8944457 pseudo LOC102003871 transcription and mRNA export factor ENY2 pseudogene NW_004955418 2196164 2198005 - 102003871 AGCD01018751;XM_005382119 MODEL 39133804 misc_rna 7SK 7SK RNA 8737937 ncrna LOC102005638 uncharacterized LOC102005638 NW_004955439 17644083 17645810 + 102005638 AGCD01036042;GBDF01110804;XR_001235185;XR_261994 MODEL 8958203 protein-coding Lipe lipase E, hormone sensitive type ENCODES a protein that exhibits all-trans-retinyl-palmitate hydrolase, all-trans-retinol forming activity (ortholog); diacylglycerol lipase activity (ortholog); hydrolase activity, acting on ester bonds (ortholog); INVOLVED IN cellular response to cold (ortholog); diacylglycerol catabolic process (ortholog); ether lipid metabolic process (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 6 (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); lipid droplet (ortholog) NW_004955555 511085 531165 + 102019855 AGCD01073035;GBDF01048257;XM_005412353;XM_013508677;XM_013508678;XM_013508679 XP_005412410;XP_013364131;XP_013364132;XP_013364133 MODEL 8945650 protein-coding Accs 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) ENCODES a protein that exhibits 1-aminocyclopropane-1-carboxylate synthase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955422 3442365 3539288 - 102008429 AGCD01022511;AGCD01022512;AGCD01022513;AGCD01022514;AGCD01022515;AGCD01022516;AGCD01022517;AGCD01022518;AGCD01022519;AGCD01022520;AGCD01022521;AGCD01022522;AGCD01022523;GBDF01053397;XM_013513829 XP_013369283 MODEL 9062535 protein-coding Ankrd60 ankyrin repeat domain 60 NW_004955445 1311078 1320906 + 102021811 AGCD01039337;GBDF01000243;XM_005392565 XP_005392622 MODEL 8837464 protein-coding Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 ENCODES a protein that exhibits acetyltransferase activity (ortholog); L-lysine N6-acetyltransferase activity, acting on acetyl phosphate as donor (ortholog); protein-lysine-acetyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); double-strand break repair (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome (ortholog) NW_004955403 50306726 50328015 + 102008172 AGCD01002964;AGCD01002965;GBDF01190888;XM_005373754;XM_013514290 XP_005373811;XP_013369744 MODEL 8873745 protein-coding Hspb8 heat shock protein family B (small) member 8 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); positive regulation of aggrephagy (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); cervical cancer (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955455 12290884 12304588 - 102017426 AGCD01046033;GBDJ01000874;XM_005396529 XP_005396586 MODEL 8775394 protein-coding Adamtsl1 ADAMTS like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955434 20929569 21392319 + 102023839 AGCD01032623;AGCD01032624;AGCD01032625;AGCD01032626;AGCD01032627;AGCD01032628;GBBH01066763;XM_005388721;XM_005388722 XP_005388778;XP_005388779 MODEL 8717046 protein-coding Eif3g eukaryotic translation initiation factor 3 subunit G ENCODES a protein that exhibits RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); viral translational termination-reinitiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) NW_004955495 1452806 1456834 - 102027654 AGCD01061693;GBDF01000179;XM_005405580 XP_005405637 MODEL 8820256 protein-coding Atp8a1 ATPase phospholipid transporting 8A1 ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylserine flippase activity (ortholog); phosphatidylserine floppase activity (ortholog); INVOLVED IN aminophospholipid translocation (ortholog); learning (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); familial hypercholesterolemia (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endomembrane system (ortholog); endoplasmic reticulum (ortholog) NW_004955443 5142049 5362031 + 102007946 AGCD01038232;AGCD01038233;AGCD01038234;AGCD01038235;AGCD01038236;GBCE01062282;XM_005391917;XM_005391918;XM_005391919;XM_005391920 XP_005391974;XP_005391975;XP_005391976;XP_005391977 MODEL 8948256 protein-coding Cadm1 cell adhesion molecule 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); bone development (ortholog); calcium-independent cell-cell adhesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); cell body fiber (ortholog) NW_004955412 16673401 17005082 - 102016685 AGCD01012903;AGCD01012904;AGCD01012905;GBDI01278225;XM_005378170;XM_005378171;XM_005378172;XM_005378173;XM_005378174;XM_005378175 XP_005378227;XP_005378228;XP_005378229;XP_005378230;XP_005378231;XP_005378232 MODEL 8807391 protein-coding Cmc1 C-X9-C motif containing 1 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955430 19567377 19799422 + 102009865 AGCD01029716;AGCD01029717;AGCD01029718;AGCD01029719;AGCD01029720;AGCD01029721;AGCD01029722;AGCD01029723;AGCD01029724;GBCQ01098760;XM_005387540 XP_005387597 MODEL 8868606 ncrna LOC102006725 uncharacterized LOC102006725 NW_004955449 6040808 6089424 - 102006725 AGCD01041947;AGCD01041948;GBDF01079246;XR_001235824 MODEL 8942238 protein-coding Fcho2 FCH and mu domain containing endocytic adaptor 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); plasma membrane (ortholog) NW_004955425 27506645 27632983 - 102009199 AGCD01025973;AGCD01025974;AGCD01025975;AGCD01025976;AGCD01025977;AGCD01025978;GBDK01127201;XM_005386078 XP_005386135 MODEL 8733930 protein-coding Cep170b centrosomal protein 170B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955538 3261900 3283274 + 102028337 AGCD01071156;AGCD01071157;GBCE01154808;GBDK01147734;XM_013507900;XM_013507901 XP_013363354;XP_013363355 MODEL 8989146 pseudo LOC102010453 adenosine kinase pseudogene NW_004955458 14363282 14364041 - 102010453 AGCD01047832 MODEL 8915277 protein-coding LOC102004582 vomeronasal type-1 receptor 4-like NW_004955465 12768775 12769713 + 102004582 AGCD01050559;XM_005398944 XP_005399001 MODEL 8908324 protein-coding Cipc CLOCK interacting pacemaker INVOLVED IN negative regulation of circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 1016721 1036379 + 102007938 AGCD01034970;GBDF01042048;XM_005390168;XM_005390169;XM_005390170;XM_005390171;XM_005390172;XM_005390175;XM_005390176;XM_005390177;XM_005390178;XM_013517172;XM_013517173 XP_005390225;XP_005390226;XP_005390227;XP_005390228;XP_005390229;XP_005390232;XP_005390233;XP_005390234;XP_005390235;XP_013372626;XP_013372627 MODEL 9019464 ncrna LOC102017747 uncharacterized LOC102017747 NW_004955409 1823879 1847047 - 102017747 AGCD01009184;GBDK01374880;XR_259745 MODEL 8925022 protein-coding Alkbh4 alkB homolog 4, lysine demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); actin binding (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); cleavage furrow ingression (ortholog); positive regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN contractile ring (ortholog); cytoplasm (ortholog); midbody (ortholog) NW_004955456 15158380 15167318 + 102015079 AGCD01046662;GBCQ01014194;XM_005396835 XP_005396892 MODEL 8935783 protein-coding Cd177 CD177 molecule ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); integrin binding (ortholog); protease binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell-cell adhesion (ortholog); cell-cell junction maintenance (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955555 1106722 1120756 + 102013974 AGCD01073058;GBBH01099260;XM_005412434;XM_013508720;XM_013508721 XP_005412491;XP_013364174;XP_013364175 MODEL 8749875 protein-coding Gfap glial fibrillary acidic protein ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); kinase binding (ortholog); INVOLVED IN astrocyte development (ortholog); Bergmann glial cell differentiation (ortholog); D-aspartate import across plasma membrane (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH Abdominal Pain (ortholog); alcohol use disorder (ortholog); Alexander disease (ortholog); FOUND IN astrocyte end-foot (ortholog); astrocyte projection (ortholog); cell body (ortholog) NW_004955451 17695835 17703894 - 102021410 AGCD01043767;GBDF01289667;XM_005394555;XM_005394556 XP_005394612;XP_005394613 MODEL 8820722 protein-coding Aagab alpha and gamma adaptin binding protein ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955450 8694829 8742816 + 102025069 AGCD01042575;AGCD01042576;GBCQ01094289;XM_005393690 XP_005393747 MODEL 39134201 misc_rna 7SK 7SK RNA 9003764 protein-coding LOC102004231 alpha-L-fucosidase-like NW_004955403 19942836 19945318 + 102004231 AGCD01002152;XM_013514776 XP_013370230 MODEL 9064412 ncrna LOC102011229 uncharacterized LOC102011229 NW_004955515 241 57618 - 102011229 AGCD01067170;AGCD01067171;AGCD01067172;AGCD01067173;AGCD01067174;AGCD01067175;AGCD01067176;AGCD01067177;AGCD01067178;AGCD01067179;AGCD01067180;AGCD01067181;GBCE01018606;XR_264517 MODEL 8884018 protein-coding Diras1 DIRAS family GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN positive regulation of MAP kinase activity (ortholog); ASSOCIATED WITH early myoclonic encephalopathy (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955495 5002803 5005203 - 102017995 AGCD01061969;GBDJ01193820;XM_005405828 XP_005405885 MODEL 8876523 protein-coding Ecm1 extracellular matrix protein 1 ENCODES a protein that exhibits interleukin-2 receptor binding (ortholog); protease binding (ortholog); INVOLVED IN chondrocyte development (ortholog); endochondral bone growth (ortholog); inflammatory response (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955413 293295 299293 - 102011295 AGCD01013457;GBCE01028891;XM_005378672;XM_005378673;XM_005378675;XM_013511471 XP_005378729;XP_005378730;XP_005378732;XP_013366925 MODEL 8938760 protein-coding LOC102008207 glutathione peroxidase 6 NW_004955465 13770938 13774725 - 102008207 AGCD01050623;GBBH01092321;GBDJ01389285;XM_013521797 XP_013377251 MODEL 8888486 protein-coding Chchd5 coiled-coil-helix-coiled-coil-helix domain containing 5 ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955470 1704461 1708675 - 102025782 AGCD01052653;GBDJ01084263;XM_005400600 XP_005400657 MODEL 8810772 protein-coding Ift81 intraflagellar transport 81 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary transport involved in cilium assembly (ortholog); regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955482 7114639 7182378 + 102020121 AGCD01057438;AGCD01057439;AGCD01057440;AGCD01057441;AGCD01057442;AGCD01057443;GBDF01125793;XM_005403140;XM_013503735 XP_005403197;XP_013359189 MODEL 8782861 protein-coding Immp2l inner mitochondrial membrane peptidase subunit 2 ENCODES a protein that exhibits peptidase activity (ortholog); signal peptidase activity (ortholog); INVOLVED IN blood circulation (ortholog); brain development (ortholog); cerebellum vasculature development (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH autistic disorder (ortholog); diffuse large B-cell lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane peptidase complex (ortholog); mitochondrion (ortholog) NW_004955410 14567787 15420025 - 102014333 AGCD01010910;AGCD01010911;AGCD01010912;AGCD01010913;AGCD01010914;AGCD01010915;AGCD01010916;AGCD01010917;AGCD01010918;AGCD01010919;AGCD01010920;AGCD01010921;AGCD01010922;AGCD01010923;AGCD01010924;AGCD01010925;AGCD01010926;GBCQ01071840;XM_005377314 XP_005377371 MODEL 8772604 protein-coding Agmat agmatinase (putative) ENCODES a protein that exhibits arginase activity (ortholog); guanidinobutyrase activity (ortholog); guanidinopropionase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955527 2563705 2572421 + 102011475 AGCD01069453;GBCB01087179;XM_005409867 XP_005409924 MODEL 9055610 protein-coding Jdp2 Jun dimerization protein 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of fat cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955523 140546 169769 - 102009414 AGCD01068435;AGCD01068436;GBCQ01179566;GBDK01231822;XM_013507179 XP_013362633 MODEL 39132133 rrna 5S_rRNA 5S ribosomal RNA 8799325 protein-coding Gria3 glutamate ionotropic receptor AMPA type subunit 3 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN cellular response to glycine (ortholog); long-term synaptic potentiation (ortholog); protein heterotetramerization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); aortic valve insufficiency (ortholog); astigmatism (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog); dendrite (ortholog) NW_004955473 11283642 11574836 - 102020657 AGCD01054139;GBDJ01359746;XM_005401286;XM_005401287;XM_005401288;XM_005401289 XP_005401343;XP_005401344;XP_005401345;XP_005401346 MODEL 8993567 protein-coding Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); cold acclimation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early endosome membrane (ortholog) NW_004955405 39503020 39540069 - 102016558 AGCD01005501;GBCQ01070746;XM_005374608;XM_013518984;XM_013518992;XM_013518995 XP_005374665;XP_013374438;XP_013374446;XP_013374449 MODEL 8965331 ncrna LOC102012854 uncharacterized LOC102012854 NW_004955471 10905684 10911425 - 102012854 AGCD01053235;GBDF01112987;XR_263533 MODEL 9007790 protein-coding Btnl10 Butyrophilin-like protein 10 NW_004955581 62183 69040 + 102011066 AGCD01075656;GBBH01076877;XM_005414227 XP_005414284 MODEL 8931135 protein-coding LOC102011649 NADH-cytochrome b5 reductase 2 ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955414 23421387 23427883 - 102011649 AGCD01015497;GBCE01040815;GBDJ01193166;XM_013511703 XP_013367157 MODEL 9000818 pseudo LOC102009312 60S ribosomal protein L17 pseudogene NW_004955434 13427369 13427899 + 102009312 AGCD01032402 MODEL 8806949 protein-coding LOC102021842 5-hydroxyisourate hydrolase-like NW_004955454 3525747 3529939 - 102021842 AGCD01045087;GBCQ01176230;XM_005395943;XM_013520070 XP_005396000;XP_013375524 MODEL 9023689 protein-coding Adamtsl2 ADAMTS like 2 ENCODES a protein that exhibits microfibril binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); lobar bronchus epithelium development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH acromicric dysplasia (ortholog); aortic aneurysm (ortholog); Congenital Hand Deformities (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955513 2849310 2879130 + 102019833 AGCD01066891;GBCE01022223;XM_013506730;XM_013506731;XM_013506732;XM_013506733 XP_013362184;XP_013362185;XP_013362186;XP_013362187 MODEL 8899655 protein-coding Eif3h eukaryotic translation initiation factor 3 subunit H ENCODES a protein that exhibits metal-dependent deubiquitinase activity (ortholog); translation initiation factor activity (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); breast cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) NW_004955417 22757781 22846349 - 102029395 AGCD01018422;AGCD01018423;GBDI01006244;XM_005381895;XM_005381896 XP_005381952;XP_005381953 MODEL 8826247 protein-coding Col7a1 collagen type VII alpha 1 chain ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN collagen fibril organization (ortholog); endodermal cell differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); anemia (ortholog); atrial fibrillation (ortholog); FOUND IN basement membrane (ortholog) NW_004955532 650913 681186 - 102028464 AGCD01070143;GBBH01050641;XM_013507646 XP_013363100 MODEL 39133941 misc_rna 7SK 7SK RNA 8747015 protein-coding Cdhr2 cadherin related family member 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN brush border assembly (ortholog); cell-cell adhesion mediated by cadherin (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955408 28832362 28871345 + 102014325 AGCD01008732;AGCD01008733;GBCQ01066107;XM_013509624;XM_013509630;XM_013509633 XP_013365078;XP_013365084;XP_013365087 MODEL 8823193 protein-coding LOC102006726 saoe class I histocompatibility antigen, C alpha chain-like NW_004955583 1134089 1136685 - 102006726 AGCD01075893;GBCC01000509;GBDK01001536;XM_013509825 XP_013365279 MODEL 8844441 protein-coding Ccdc68 coiled-coil domain containing 68 INVOLVED IN intracellular protein localization (ortholog); microtubule anchoring at centrosome (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Habitual Abortions (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog) NW_004955402 39426158 39493655 - 102027591 AGCD01000981;AGCD01000982;GBCQ01127483;XM_005372956;XM_013510881;XM_013510885;XM_013510887;XM_013510889;XM_013510892;XM_013510895;XM_013510898;XM_013510903;XM_013510910;XM_013510913;XM_013510919;XM_013510924;XM_013510934;XM_013510937;XM_013510939 XP_005373013;XP_013366335;XP_013366339;XP_013366341;XP_013366343;XP_013366346;XP_013366349;XP_013366352;XP_013366357;XP_013366364;XP_013366367;XP_013366373;XP_013366378;XP_013366388;XP_013366391;XP_013366393 MODEL 8787750 protein-coding Trmt1l tRNA methyltransferase 1L ENCODES a protein that exhibits tRNA (guanine(27)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN adult behavior (ortholog); adult locomotory behavior (ortholog); tRNA N2-guanine methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955406 23735715 23772010 - 102008816 AGCD01006182;AGCD01006183;AGCD01006184;GBDF01007025;XM_005375072;XM_005375073;XM_013521695;XM_013521698 XP_005375129;XP_005375130;XP_013377149;XP_013377152 MODEL 39133805 misc_rna 7SK 7SK RNA 8733126 ncrna LOC102017748 uncharacterized LOC102017748 NW_004955409 7814743 7821735 - 102017748 AGCD01009366;AGCD01009367;GBDF01207876;XR_001232620;XR_259757 MODEL 8815556 protein-coding LOC102003872 olfactory receptor 1A1-like NW_004955481 248188 249135 + 102003872 AGCD01056784;XM_005402915 XP_005402972 MODEL 8934007 protein-coding Fchsd1 FCH and double SH3 domains 1 INVOLVED IN apoptotic process (ortholog); gene expression (ortholog); import into nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cuticular plate (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955415 12123520 12135412 + 102006572 AGCD01016185;GBDF01114965;XM_005380728;XM_005380729 XP_005380785;XP_005380786 MODEL 9065298 protein-coding Lipf lipase F, gastric type ENCODES a protein that exhibits malate dehydrogenase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN malate metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); thymoma (ortholog); FOUND IN extracellular region (ortholog); mitochondrion (ortholog) NW_004955425 4267977 4284996 - 102022515 AGCD01025310;GBBH01000444;XM_005385871;XM_005385872;XM_013514778 XP_005385928;XP_005385929;XP_013370232 MODEL 8738750 protein-coding Acd ACD shelterin complex subunit and telomerase recruitment factor ENCODES a protein that exhibits DNA polymerase binding (ortholog); protein-containing complex binding (ortholog); telomerase inhibitor activity (ortholog); INVOLVED IN embryonic limb morphogenesis (ortholog); establishment of protein localization to telomere (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH autosomal dominant dyskeratosis congenita 6 (ortholog); Autosomal Recessive Dyskeratosis Congenita 7 (ortholog); breast carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear body (ortholog); nuclear telomere cap complex (ortholog) NW_004955484 9022520 9025446 + 102026981 AGCD01058403;GBDJ01271407;XM_005403635 XP_005403692 MODEL 10222175 protein-coding Catsperh catsper channel auxiliary subunit eta FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955422 20108510 20110493 + 106148485 AGCD01023066;GBDF01222835;XM_013514195;XM_013514196 XP_013369649;XP_013369650 MODEL 8947432 protein-coding Gfer growth factor, augmenter of liver regeneration ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to actinomycin D (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to toxic substance (ortholog); PARTICIPATES IN intermembrane space assembly pathway of mitochondrial protein import; mitochondrial iron-sulfur cluster export pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); mitochondrion (ortholog) NW_004955442 15280753 15283405 - 102010739 AGCD01037864;GBDI01129394;XM_005391484;XM_005391485 XP_005391541;XP_005391542 MODEL 8754840 protein-coding Esd esterase D ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); identical protein binding (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Hypoxia (ortholog); osteoarthritis (ortholog); FOUND IN cytosol (ortholog) NW_004955431 524491 551871 - 102010084 AGCD01029869;AGCD01029870;GBBH01065118;GBCB01022499;XM_013515897 XP_013371351 MODEL 9018561 pseudo LOC102007074 60S ribosomal protein L27a pseudogene NW_004955450 9968147 9968719 + 102007074 AGCD01042602 MODEL 8848891 protein-coding Atp8b1 ATPase phospholipid transporting 8B1 ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); ATPase-coupled intramembrane lipid carrier activity (ortholog); cardiolipin binding (ortholog); INVOLVED IN aminophospholipid transport (ortholog); apical protein localization (ortholog); bile acid and bile salt transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); benign recurrent intrahepatic cholestasis 1 (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955402 41994993 42113380 - 102007071 AGCD01001030;AGCD01001031;AGCD01001032;GBDK01361540;XM_005372979;XM_013510988 XP_005373036;XP_013366442 MODEL 8906041 protein-coding Chchd6 coiled-coil-helix-coiled-coil-helix domain containing 6 INVOLVED IN cristae formation (ortholog); DNA damage response (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955429 16546397 16786139 - 102022626 AGCD01028834;AGCD01028835;AGCD01028836;GBDJ01187901;XM_005387259;XM_013515549;XM_013515550;XM_013515551;XM_013515552 XP_005387316;XP_013371003;XP_013371004;XP_013371005;XP_013371006 MODEL 8925249 protein-coding Cmc2 C-X9-C motif containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955522 3774136 3801892 - 102028889 AGCD01068397;AGCD01068398;GBDF01002932;XM_005409349;XM_005409350;XM_013507101;XM_013507102;XM_013507103;XR_001231903;XR_264624;XR_264626;XR_264627 XP_005409406;XP_005409407;XP_013362555;XP_013362556;XP_013362557 MODEL 8845720 protein-coding Ift88 intraflagellar transport 88 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); brain development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); autosomal recessive polycystic kidney disease (ortholog); FOUND IN acrosomal membrane (ortholog); axonemal basal plate (ortholog); axoneme (ortholog) NW_004955497 1338959 1454788 + 102011216 AGCD01062457;AGCD01062458;AGCD01062459;AGCD01062460;GBCE01023354;XM_005406308;XM_005406309;XM_005406310;XM_013505482;XM_013505483;XM_013505484;XM_013505486;XR_264192 XP_005406365;XP_005406366;XP_005406367;XP_013360936;XP_013360937;XP_013360938;XP_013360940 MODEL 8980485 protein-coding Aprg1 APRG1 tumor suppressor candidate ASSOCIATED WITH stomach cancer (ortholog) NW_004955421 4296058 4296534 + 102028426 AGCD01021688;XM_005415366 XP_005415423 MODEL 8938961 protein-coding Immt inner membrane mitochondrial protein INVOLVED IN cristae formation (ortholog); mitochondrial calcium ion homeostasis (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholangiocarcinoma (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955424 1438158 1476552 + 102018941 AGCD01024237;GBDI01082771;XM_005385400;XM_005385402;XM_005385403;XM_005385404;XM_005385405;XM_013514670 XP_005385457;XP_005385459;XP_005385460;XP_005385461;XP_005385462;XP_013370124 MODEL 8969219 ncrna LOC102004585 uncharacterized LOC102004585 NW_004955466 1410513 1420772 - 102004585 AGCD01050705;GBDF01121150;XR_263275 MODEL 8859240 ncrna LOC102010457 uncharacterized LOC102010457 NW_004955462 7333301 7356659 - 102010457 AGCD01049301;AGCD01049302;GBDF01308302;XR_001236602;XR_001236603 MODEL 8898410 protein-coding Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 ENCODES a protein that exhibits ATP diphosphatase activity (ortholog); bis(5'-adenosyl)-pentaphosphatase activity (ortholog); bis(5'-adenosyl)-triphosphatase activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); basophil activation involved in immune response (ortholog); inorganic diphosphate transport (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955436 12310773 12384815 + 102019951 AGCD01033838;AGCD01033839;AGCD01033840;GBDK01141658;XM_005389205;XM_005389206 XP_005389262;XP_005389263 MODEL 8701729 protein-coding Cep19 centrosomal protein 19 INVOLVED IN cilium assembly (ortholog); microtubule anchoring at centrosome (ortholog); trans-Golgi to periciliary membrane compartment transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cone-rod dystrophy (ortholog); Morbid Obesity and Spermatogenic Failure (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955420 12823663 12829598 - 102014673 AGCD01020897;GBDF01225980;XM_005383140;XM_005383141 XP_005383197;XP_005383198 MODEL 9055522 protein-coding LOC102004594 olfactory receptor 51E1-like NW_004955414 21006945 21009431 + 102004594 AGCD01015401;AGCD01015402;XM_005380490 XP_005380547 MODEL 8928098 pseudo LOC102017753 peptidyl-prolyl cis-trans isomerase G pseudogene NW_004955411 11900324 11902482 - 102017753 AGCD01011834 MODEL 8860144 protein-coding Cd180 CD180 molecule ENCODES a protein that exhibits lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); B cell proliferation involved in immune response (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); sarcoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955446 1940498 1959804 + 102012258 AGCD01039977;GBCE01120554;XM_005392600 XP_005392657 MODEL 8821763 pseudo LOC102004232 40S ribosomal protein S3 pseudogene NW_004955451 1507223 1508030 - 102004232 AGCD01042972 MODEL 8938877 protein-coding Diras2 DIRAS family GTPase 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN positive regulation of MAP kinase activity (ortholog); FOUND IN plasma membrane (ortholog) NW_004955515 1526436 1551811 + 102014479 AGCD01067230;GBBH01086252;GBDK01025126;XM_005408872 XP_005408929 MODEL 39131882 rrna 5S_rRNA 5S ribosomal RNA 8858527 pseudo LOC102008208 spermine synthase pseudogene NW_004955412 21750895 21751995 - 102008208 AGCD01013025 MODEL 8791097 pseudo LOC102011231 heterogeneous nuclear ribonucleoprotein F-like NW_004955516 4862856 4863984 - 102011231 AGCD01067538 MODEL 9046686 protein-coding Kcnmb2 potassium calcium-activated channel subfamily M regulatory beta subunit 2 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); Premature Obstetric Labor (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955420 7797404 8164199 + 102009389 AGCD01020706;AGCD01020707;AGCD01020708;AGCD01020709;AGCD01020710;AGCD01020711;AGCD01020712;GBDJ01305701;XM_005383031;XM_013513318;XM_013513320;XM_013513321 XP_005383088;XP_013368772;XP_013368774;XP_013368775 MODEL 8835501 protein-coding Hspb9 heat shock protein family B (small) member 9 ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955451 16198747 16199566 + 102013465 AGCD01043659;AGCD01043660;GBCQ01038139;GBDK01139365;XM_005394441 XP_005394498 MODEL 9048784 protein-coding Btnl2 butyrophilin like 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of interleukin-2 production (ortholog); positive regulation of T cell proliferation (ortholog); ASSOCIATED WITH berylliosis (ortholog); coronary artery disease (ortholog); Graves' disease (ortholog); FOUND IN membrane (ortholog) NW_004955437 1084330 1101751 - 102018528 AGCD01034189;GBDJ01214554;XM_005389446;XM_005389447;XM_005389448 XP_005389503;XP_005389504;XP_005389505 MODEL 10140019 protein-coding LOC106149954 translation initiation factor IF-2-like NW_004955458 329439 331047 - 106149954 AGCD01047119;GBBH01141876;GBDK01081827;XM_013520875 XP_013376329 MODEL 8852360 protein-coding LOC102005641 sialic acid-binding Ig-like lectin 13 NW_004955558 974508 988735 + 102005641 AGCD01073408;AGCD01073409;GBBH01177448;XM_013508883 XP_013364337 MODEL 9059997 protein-coding Cirbp cold inducible RNA binding protein ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); poly(U) RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to cold (ortholog); mRNA stabilization (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH Alcohol-Induced Disorders, Nervous System (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleoplasm (ortholog) NW_004955495 6634389 6640800 - 102008008 AGCD01062086;GBDF01003750;XM_005405981;XM_005405982;XM_005405984;XM_005405985;XM_013505298 XP_005406038;XP_005406039;XP_005406041;XP_005406042;XP_013360752 MODEL 8737194 protein-coding LOC102008576 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like NW_004955546 1452766 1495831 + 102008576 AGCD01072068;AGCD01072069;GBBH01214822;GBDI01370020;XM_013508414 XP_013363868 MODEL 8809409 protein-coding Jhy junctional cadherin complex regulator INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955412 23721638 23781935 + 102018580 AGCD01013093;AGCD01013094;AGCD01013095;GBDJ01352357;XM_005378369 XP_005378426 MODEL 8717900 protein-coding Ccdc69 coiled-coil domain containing 69 INVOLVED IN spindle midzone assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN midbody (ortholog); spindle midzone (ortholog) NW_004955408 2471157 2498611 + 102016979 AGCD01008007;GBCB01038685;XM_005376057 XP_005376114 MODEL 9031978 protein-coding Alkbh5 alkB homolog 5, RNA demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); molecular condensate scaffold activity (ortholog); mRNA N6-methyladenosine dioxygenase activity (ortholog); INVOLVED IN gamma-delta T cell proliferation (ortholog); membraneless organelle assembly (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH lung cancer (ortholog); multiple myeloma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); paraspeckles (ortholog) NW_004955478 11104445 11128980 - 102022698 AGCD01056160;AGCD01056161;GBCE01115231;XM_005402287;XM_013503226 XP_005402344;XP_013358680 MODEL 8881084 pseudo LOC102003873 40S ribosomal protein S18 pseudogene NW_004955418 24453774 24454252 - 102003873 AGCD01019333 MODEL 8853612 protein-coding Aak1 AP2 associated kinase 1 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); Notch binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); presynaptic endocytosis (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN calyx of Held (ortholog); cell leading edge (ortholog); clathrin complex (ortholog) NW_004955424 15480783 15640471 + 102014583 AGCD01024717;AGCD01024718;AGCD01024719;GBDF01234309;XM_005385640;XM_005385641;XM_005385642;XM_005385643;XM_005385644;XM_005385645;XM_005385646;XM_005385647;XM_013514694;XM_013514695 XP_005385697;XP_005385698;XP_005385699;XP_005385700;XP_005385701;XP_005385702;XP_005385703;XP_005385704;XP_013370148;XP_013370149 MODEL 8888967 protein-coding Lipg lipase G, endothelial type ENCODES a protein that exhibits glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); high-density lipoprotein particle remodeling (ortholog); phospholipid homeostasis (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); cardiovascular system disease (ortholog); cerebral infarction (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular region (ortholog) NW_004955402 34666757 34689726 + 102013987 AGCD01000868;GBDJ01313997;XM_005372911 XP_005372968 MODEL 8788461 protein-coding LOC102012855 vomeronasal type-1 receptor 90-like NW_004955414 15022049 15022963 - 102012855 AGCD01015170;XM_005380442 XP_005380499 MODEL 8834028 protein-coding Gfi1 growth factor independent 1 transcriptional repressor ENCODES a protein that exhibits DNA-binding transcription repressor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN cell fate commitment (ortholog); cellular response to lipopolysaccharide (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nuclear body (ortholog); nuclear matrix (ortholog); nucleus (ortholog) NW_004955423 2024084 2032530 + 102020580 AGCD01023463;AGCD01023464;GBDJ01320845;XM_013514361 XP_013369815 MODEL 8817611 protein-coding Ecm2 extracellular matrix protein 2 ENCODES a protein that exhibits collagen binding (ortholog); collagen V binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) NW_004955515 5273277 5308709 + 102027561 AGCD01067347;AGCD01067348;GBDI01262746;XM_005408907;XM_005408909;XM_013506868;XM_013506869;XM_013506870;XM_013506871 XP_005408964;XP_005408966;XP_013362322;XP_013362323;XP_013362324;XP_013362325 MODEL 8844349 ncrna LOC102021847 uncharacterized LOC102021847 NW_004955455 13948091 13950615 - 102021847 AGCD01046080;GBDI01276709;XR_262858 MODEL 8994357 protein-coding Eif3i eukaryotic translation initiation factor 3 subunit I ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog); synapse (ortholog) NW_004955452 10588929 10595869 + 102018884 AGCD01044280;GBDF01010520;XM_005395055 XP_005395112 MODEL 39131883 rrna 5S_rRNA 5S ribosomal RNA 8755864 protein-coding Adamtsl3 ADAMTS like 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955416 12818153 13132960 - 102027299 AGCD01017213;AGCD01017214;AGCD01017215;AGCD01017216;AGCD01017217;AGCD01017218;GBDJ01194632;XM_005381454;XM_013512535;XM_013512536;XM_013512537 XP_005381511;XP_013367989;XP_013367990;XP_013367991 MODEL 8728765 ncrna LOC102006728 uncharacterized LOC102006728 NW_004955449 14135156 14158149 - 102006728 AGCD01042159;AGCD01042160;GBDF01209448;XR_262503 MODEL 8751717 protein-coding LOC102011232 liver carboxylesterase 1-like NW_004955433 13570134 13598314 - 102011232 AGCD01031695;AGCD01031696;GBCQ01034315;XM_005388340;XM_005388341 XP_005388397;XP_005388398 MODEL 9053879 protein-coding Cdhr3 cadherin related family member 3 ASSOCIATED WITH allergic asthma (ortholog); allergic disease (ortholog); asthma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 10457078 10520429 + 102027619 AGCD01010795;GBCE01171107;XM_005377265;XM_013510534 XP_005377322;XP_013365988 MODEL 39132134 rrna 5S_rRNA 5S ribosomal RNA 8842683 protein-coding Trmt2a tRNA methyltransferase 2A ENCODES a protein that exhibits C-methyltransferase activity (ortholog); tRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955442 17993130 17997944 + 102023302 AGCD01037991;GBDF01088981;XM_005391731;XM_005391733 XP_005391788;XP_005391790 MODEL 39133806 misc_rna 7SK 7SK RNA 8944841 protein-coding Gria4 glutamate ionotropic receptor AMPA type subunit 4 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); glutamate-gated receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of smooth muscle cell apoptotic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN neuronal cell body; AMPA glutamate receptor complex (ortholog); dendrite (ortholog) NW_004955412 8306187 8644156 + 102024201 AGCD01012717;AGCD01012718;AGCD01012719;AGCD01012720;GBCE01184813;XM_005378006;XM_005378007;XM_005378008;XM_005378009;XM_005378010;XM_005378011;XM_005378012;XM_013511180;XM_013511181;XM_013511182;XM_013511183;XM_013511184 XP_005378063;XP_005378064;XP_005378065;XP_005378066;XP_005378067;XP_005378068;XP_005378069;XP_013366634;XP_013366635;XP_013366636;XP_013366637;XP_013366638 MODEL 8878648 protein-coding LOC102009721 chromosome unknown open reading frame, human C6orf62 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog) NW_004955483 2346246 2358156 + 102009721 AGCD01057674;AGCD01057675;GBDF01209925;XM_005403364;XM_005403365 XP_005403421;XP_005403422 MODEL 8816470 protein-coding Cep192 centrosomal protein 192 ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN centrosome-templated microtubule nucleation (ortholog); mitotic spindle assembly (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955402 604605 675179 - 102007714 AGCD01000028;GBDI01256968;XM_013512709;XM_013512751;XM_013512786;XM_013512821;XM_013512845;XM_013512868;XM_013512886 XP_013368163;XP_013368205;XP_013368240;XP_013368275;XP_013368299;XP_013368322;XP_013368340 MODEL 8714078 ncrna LOC102011654 uncharacterized LOC102011654 NW_004955476 4365503 4385423 - 102011654 AGCD01055280;GBDI01309143;XR_001230807;XR_001230808;XR_001230809;XR_001230810 MODEL 8743302 protein-coding Cadm2 cell adhesion molecule 2 INVOLVED IN synaptic membrane adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955407 7070355 7355841 - 102026830 AGCD01006971;AGCD01006972;AGCD01006973;AGCD01006974;AGCD01006975;GBDI01319083;XM_005375539 XP_005375596 MODEL 9027625 ncrna LOC102003874 uncharacterized LOC102003874 NW_004955482 8396477 8398258 + 102003874 AGCD01057519;GBDF01127761;XR_263850 MODEL 8782041 ncrna LOC102008209 uncharacterized LOC102008209 NW_004955467 9932033 9948996 + 102008209 AGCD01051536;AGCD01051537;GBBH01110880;XR_001236856 MODEL 8865198 protein-coding Agmo alkylglycerol monooxygenase ENCODES a protein that exhibits glyceryl-ether monooxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); lipid metabolic process (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955410 18713191 18881824 - 102020639 AGCD01011010;AGCD01011011;AGCD01011012;AGCD01011013;AGCD01011014;XM_005415288 XP_005415345 MODEL 39133942 misc_rna 7SK 7SK RNA 8910300 protein-coding Gfi1b growth factor independent 1B transcriptional repressor ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of granulocyte differentiation (ortholog); regulation of erythrocyte differentiation (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955513 2273267 2281850 + 102004627 AGCD01066872;GBBH01144928;XM_005408400;XM_005408401 XP_005408457;XP_005408458 MODEL 9002456 protein-coding Col8a1 collagen type VIII alpha 1 chain INVOLVED IN camera-type eye morphogenesis (ortholog); endodermal cell differentiation (ortholog); epithelial cell proliferation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Congenital Abnormalities (ortholog); diastolic heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN collagen type VIII trimer (ortholog) NW_004955427 1187550 1335794 + 102018203 AGCD01026868;AGCD01026869;AGCD01026870;AGCD01026871;GBDK01021566;XM_005386285;XM_005386286;XM_005386287 XP_005386342;XP_005386343;XP_005386344 MODEL 9046707 protein-coding Btnl9 butyrophilin like 9 ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog) NW_004955530 263915 284368 - 102011359 AGCD01069836;AGCD01069837;AGCD01069838;GBDI01324980;XM_005410120;XM_013507547 XP_005410177;XP_013363001 MODEL 8931997 protein-coding Chchd7 coiled-coil-helix-coiled-coil-helix domain containing 7 ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955454 15284114 15286761 + 102012728 AGCD01045491;GBBH01141590;GBDK01186701;XM_013520257 XP_013375711 MODEL 8780632 protein-coding Aprt adenine phosphoribosyltransferase ENCODES a protein that exhibits adenine binding (ortholog); adenine phosphoribosyltransferase activity (ortholog); AMP binding (ortholog); INVOLVED IN adenine metabolic process (ortholog); AMP salvage (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenine phosphoribosyltransferase deficiency (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955541 2687938 2690906 - 102005635 AGCD01071422;GBBH01000927;XM_005411021 XP_005411078 MODEL 8843810 protein-coding LOC102010459 potassium channel subfamily U member 1-like NW_004955463 12698574 12705738 + 102010459 AGCD01049856;AGCD01049857;GBBH01200395;XM_005398408 XP_005398465 MODEL 39134202 misc_rna 7SK 7SK RNA 10073913 protein-coding Ankrd61 ankyrin repeat domain 61 FOUND IN nucleoplasm (ortholog) NW_004955460 13744482 13748863 - 106149991 AGCD01048722;GBDF01043667;XM_013521109 XP_013376563 MODEL 8976033 protein-coding Jkamp JNK1/MAPK8 associated membrane protein ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); ASSOCIATED WITH neurodevelopmental disorder with seizures and impaired intellectual and language development (ortholog) NW_004955466 13205424 13225573 + 102008393 AGCD01051152;AGCD01051153;AGCD01051154;GBDF01160049;XM_005399228;XM_005399229;XM_013521952 XP_005399285;XP_005399286;XP_013377406 MODEL 9066751 protein-coding Catsperq catsper channel auxiliary subunit theta ASSOCIATED WITH cervical cancer (ortholog); Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955454 2974713 2976454 - 102024528 AGCD01045044;GBDF01124984;XM_005396110 XP_005396167 MODEL 8903064 protein-coding Fchsd2 FCH and double SH3 domains 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); membrane organization (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anchoring junction (ortholog); clathrin-coated pit (ortholog); plasma membrane (ortholog) NW_004955414 18343832 18597675 + 102019494 AGCD01015276;AGCD01015277;AGCD01015278;AGCD01015279;AGCD01015280;AGCD01015281;AGCD01015282;AGCD01015283;AGCD01015284;AGCD01015285;GBDF01248886;XM_005379965 XP_005380022 MODEL 8833959 pseudo LOC102017756 ADP-ribosylation factor 1-like NW_004955467 8516546 8517706 + 102017756 AGCD01051452 MODEL 8804785 ncrna LOC102004236 uncharacterized LOC102004236 NW_004955406 7288327 7301552 - 102004236 AGCD01005768;XR_259482 MODEL 8991392 protein-coding Esf1 ESF1 nucleolar pre-rRNA processing protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955415 23156521 23221027 - 102003229 AGCD01016551;AGCD01016552;GBCQ01150807;XM_005380886 XP_005380943 MODEL 8973203 protein-coding Ace2 angiotensin converting enzyme 2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); angiotensin maturation (ortholog); angiotensin-mediated drinking behavior (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) NW_004955519 2591229 2643705 + 102015756 AGCD01067937;GBCC01002081;GQ262783;NM_001282361;XM_013506974;XM_013506975 ACT66267;NP_001269290;XP_013362428;XP_013362429 PROVISIONAL 8711088 protein-coding LOC102009319 HLA class II histocompatibility antigen, DRB1-1 beta chain-like NW_004955437 1228243 1262090 - 102009319 AGCD01034197;AGCD01034198;GBDK01061271;XM_013517040;XM_013517041 XP_013372494;XP_013372495 MODEL 8944030 protein-coding Cd19 CD19 molecule ENCODES a protein that exhibits coreceptor activity (ortholog); INVOLVED IN antigen receptor-mediated signaling pathway (ortholog); B cell mediated immunity (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH agammaglobulinemia (ortholog); Breast Cancer, Familial (ortholog); common variable immunodeficiency (ortholog); FOUND IN external side of plasma membrane (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955493 6540160 6544077 - 102012973 AGCD01061119;GBDI01310097;XM_005405157;XM_013504842;XM_013504843 XP_005405214;XP_013360296;XP_013360297 MODEL 8949303 protein-coding LOC102007080 uncharacterized LOC102007080 NW_004955452 2394438 2439074 + 102007080 AGCD01043895;GBDF01015522;XM_005394736;XM_005394737;XR_001236123 XP_005394793;XP_005394794 MODEL 8732096 protein-coding Aamdc adipogenesis associated Mth938 domain containing INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of fat cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog) NW_004955414 14058445 14085652 - 102007882 AGCD01015141;GBCB01002051;XM_005379828;XM_005379829;XM_005379830;XM_005379831;XM_005379832;XM_005379833 XP_005379885;XP_005379886;XP_005379887;XP_005379888;XP_005379889;XP_005379890 MODEL 8774363 protein-coding Iftap intraflagellar transport associated protein ENCODES a protein that exhibits intraciliary transport particle A binding (ortholog); INVOLVED IN acrosome reaction (ortholog); fertilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cytosol (ortholog) NW_004955422 9804012 9867580 - 102003882 AGCD01022721;AGCD01022722;AGCD01022723;GBCE01133930;XM_005384101;XM_005384102 XP_005384158;XP_005384159 MODEL 8804705 protein-coding Dis3 DIS3 exosome endoribonuclease and 3''-5'' exoribonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); endonuclease activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN CUT catabolic process (ortholog); RNA catabolic process (ortholog); RNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); CNS neuroblastoma with FOXR2 activation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear exosome (RNase complex) (ortholog) NW_004955404 33897681 33924069 + 102027138 AGCD01004083;AGCD01004084;GBDF01193658;XM_005374190;XM_005374191;XR_001234968 XP_005374247;XP_005374248 MODEL 8953570 protein-coding Kcnmb3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955420 8428823 8445940 - 102010810 AGCD01020719;GBDF01264141;XM_005383036 XP_005383093 MODEL 8918156 protein-coding Hspbap1 HSPB1 associated protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955427 21931101 22004811 - 102012881 AGCD01027461;AGCD01027462;AGCD01027463;GBDK01393831;XM_005386520;XM_005386521 XP_005386577;XP_005386578 MODEL 9063739 protein-coding Eif3j eukaryotic translation initiation factor 3 subunit J ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog) NW_004955416 11066030 11085054 + 102009383 AGCD01017172;AGCD01017173;AGCD01017174;GBDF01047000;XM_005381693 XP_005381750 MODEL 10394534 ncrna LOC106149955 uncharacterized LOC106149955 NW_004955458 5199214 5213527 + 106149955 AGCD01047467;AGCD01047468;AGCD01047469;GBCE01149790;XR_001236448 MODEL 9019771 pseudo LOC102006731 thymosin beta-10 pseudogene NW_004955402 41974553 41978585 + 102006731 AGCD01001028;XM_005372978 MODEL 8703262 protein-coding Ciroz ciliated left-right organizer protein containing ZP-N domains INVOLVED IN determination of left/right symmetry (ortholog); establishment of left/right asymmetry (ortholog); heart development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); dextrocardia (ortholog); Kartagener syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 2691850 2717340 + 102020345 AGCD01059006;GBDF01112771;XM_005404305 XP_005404362 MODEL 8819606 protein-coding LOC102011234 40S ribosomal protein S17-like NW_004955523 399503 400042 - 102011234 AGCD01068454;GBDJ01263809;XM_013507145 XP_013362599 MODEL 8821678 protein-coding Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 ENCODES a protein that exhibits bis(5'-adenosyl)-triphosphatase activity (ortholog); INVOLVED IN positive regulation of blood coagulation (ortholog); purine ribonucleoside catabolic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955437 11169778 11187544 + 102029793 AGCD01034569;GBDF01046277;XM_005389840;XM_005389841;XM_005389842;XM_005389843;XM_005389845;XM_013516974 XP_005389897;XP_005389898;XP_005389899;XP_005389900;XP_005389902;XP_013372428 MODEL 8985332 ncrna LOC102004595 uncharacterized LOC102004595 NW_004955415 837754 877703 - 102004595 AGCD01015854;AGCD01015855;GBBH01145410;XR_001233209 MODEL 8736240 protein-coding Ccdc70 coiled-coil domain containing 70 FOUND IN plasma membrane (ortholog) NW_004955431 5166451 5170263 + 102005287 AGCD01030016;GBDF01001040;XM_005387609;XM_005387610 XP_005387666;XP_005387667 MODEL 8994263 protein-coding Cdhr4 cadherin related family member 4 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955532 1644995 1690897 - 102017697 AGCD01070196;AGCD01070197;GBBH01004272;XM_005410215;XM_005410216;XM_005410217;XM_013507603 XP_005410272;XP_005410273;XP_005410274;XP_013363057 MODEL 8869541 protein-coding Liph lipase H ENCODES a protein that exhibits glycerophospholipase activity (ortholog); heparin binding (ortholog); INVOLVED IN lipid catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); familial woolly hair syndrome (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955420 22015254 22049508 + 102010908 AGCD01021178;AGCD01021179;AGCD01021180;GBBH01172461;XM_005383294 XP_005383351 MODEL 8915488 ncrna LOC102012860 uncharacterized LOC102012860 NW_004955418 16415786 16489113 - 102012860 AGCD01019124;GBDF01307770;XR_001233536;XR_260562;XR_260563 MODEL 8968845 protein-coding LOC102011663 olfactory receptor 2T27-like NW_004955418 30179310 30182515 - 102011663 AGCD01019506;XM_013512880 XP_013368334 MODEL 8955451 ncrna LOC102021848 uncharacterized LOC102021848 NW_004955407 40111586 40113235 - 102021848 AGCD01007838;GBDF01059141;XR_001231372 MODEL 8975942 protein-coding Cadm3 cell adhesion molecule 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN heterophilic cell-cell adhesion (ortholog); homophilic cell-cell adhesion (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Charcot-Marie-Tooth Disease Axonal Type 2FF (ortholog); genetic disease (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); GABA-ergic synapse (ortholog) NW_004955468 10963773 10994266 + 102003332 AGCD01052109;GBDK01250126;XM_005400161;XM_005400163 XP_005400218;XP_005400220 MODEL 39131884 rrna 5S_rRNA 5S ribosomal RNA 8967107 protein-coding Imp3 IMP U3 small nucleolar ribonucleoprotein 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN Mpp10 complex (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955450 2690814 2692336 + 102026925 AGCD01042395;GBDF01087621;XM_005393505 XP_005393562 MODEL 8702201 pseudo LOC102005642 T-complex protein 1 subunit theta pseudogene NW_004955443 13804351 13806658 - 102005642 AGCD01038484 MODEL 8946184 protein-coding Gfm1 G elongation factor mitochondrial 1 ENCODES a protein that exhibits GTPase activity (ortholog); translation elongation factor activity (ortholog); INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); combined oxidative phosphorylation deficiency 1 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955448 9390576 9432919 + 102027473 AGCD01041472;AGCD01041473;GBDF01082492;XM_005393104 XP_005393161 MODEL 8996407 protein-coding Adamtsl4 ADAMTS like 4 ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN epithelial cell development (ortholog); extracellular matrix organization (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH autosomal recessive isolated ectopia lentis 2 (ortholog); Craniosynostosis with Ectopia Lentis (ortholog); ectopia lentis with ectopia of pupil (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) NW_004955413 258078 269324 - 102010983 AGCD01013454;AGCD01013455;GBCQ01066864;GBDI01082370;XM_005378671;XM_013511417 XP_005378728;XP_013366871 MODEL 8738007 protein-coding LOC102008580 uncharacterized LOC102008580 NW_004955558 1650552 1710254 + 102008580 AGCD01073456;AGCD01073457;AGCD01073458;AGCD01073459;AGCD01073460;AGCD01073461;AGCD01073462;XM_013508849 XP_013364303 MODEL 39132138 rrna 5S_rRNA 5S ribosomal RNA 39134203 misc_rna 7SK 7SK RNA 8876679 protein-coding Ankrd63 ankyrin repeat domain 63 NW_004955416 7212413 7216526 - 102017122 AGCD01016970;GBDF01016126;XM_005381225;XM_005381226;XM_005381227;XM_013512598 XP_005381282;XP_005381283;XP_005381284;XP_013368052 MODEL 39133807 misc_rna 7SK 7SK RNA 9019548 protein-coding Grid1 glutamate ionotropic receptor delta type subunit 1 ENCODES a protein that exhibits G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential (ortholog); GABA receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of synaptic plasticity (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Colorectal Neoplasms (ortholog); lung cancer (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955510 4902908 5563924 - 102021467 AGCD01066273;AGCD01066274;AGCD01066275;AGCD01066276;AGCD01066277;AGCD01066278;AGCD01066279;AGCD01066280;AGCD01066281;AGCD01066282;GBCB01008231;XM_013506310 XP_013361764 MODEL 8985018 protein-coding Jmjd1c jumonji domain containing 1C ENCODES a protein that exhibits histone H3K9 demethylase activity (ortholog); protein demethylase activity (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); lipid biosynthetic process (ortholog); maintenance of cell number (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955425 16343314 16552552 - 102024136 AGCD01025600;AGCD01025601;AGCD01025602;AGCD01025603;AGCD01025604;AGCD01025605;AGCD01025606;AGCD01025607;AGCD01025608;AGCD01025609;AGCD01025610;GBCE01003019;XM_013514771 XP_013370225 MODEL 8789901 protein-coding Alkbh6 alkB homolog 6, nucleotide demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955468 2575469 2580632 + 102012522 AGCD01051827;GBDF01126813;XM_005399930;XM_005399933;XM_013522541 XP_005399987;XP_005399990;XP_013377995 MODEL 8898550 protein-coding Fcmr Fc mu receptor ENCODES a protein that exhibits high-affinity IgM receptor activity (ortholog); IgM binding (ortholog); polymeric immunoglobulin binding (ortholog); INVOLVED IN Fc receptor-mediated immune complex endocytosis (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); immunoglobulin transcytosis in epithelial cells (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); early endosome membrane (ortholog); external side of plasma membrane (ortholog) NW_004955406 42438173 42452339 - 102023000 AGCD01006707;AGCD01006708;GBBH01063332;GBDI01007407;XM_013502785 XP_013358239 MODEL 8888838 protein-coding Ecpas Ecm29 proteasome adaptor and scaffold ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN ERAD pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytoplasmic vesicle (ortholog) NW_004955419 15775208 15886101 + 102010806 AGCD01020089;AGCD01020090;AGCD01020091;AGCD01020092;GBBH01185618;GBDF01208691;XM_013513203 XP_013368657 MODEL 9008032 protein-coding Igbp1 immunoglobulin binding protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); mitogen-activated protein kinase kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of stress-activated MAPK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); corpus callosum agenesis-intellectual disability-coloboma-micrognathia syndrome (ortholog); FOUND IN cytoplasm (ortholog); microtubule (ortholog) NW_004955475 9671162 9694926 + 102020332 AGCD01055069;GBDK01196227;XM_005401610;XM_005401612;XM_005401613;XM_013502864;XM_013502865 XP_005401667;XP_005401669;XP_005401670;XP_013358318;XP_013358319 MODEL 8976899 protein-coding Atp8b2 ATPase phospholipid transporting 8B2 ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylcholine flippase activity (ortholog); phosphatidylcholine floppase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); phospholipid-translocating ATPase complex (ortholog) NW_004955545 850522 872650 + 102011048 AGCD01071821;GBDF01017530;XM_005411518;XM_013508246 XP_005411575;XP_013363700 MODEL 8747629 protein-coding Aptx aprataxin ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); DNA 5'-adenosine monophosphate hydrolase activity (ortholog); INVOLVED IN regulation of protein stability (ortholog); single strand break repair (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); coenzyme Q10 deficiency disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955472 2645716 2664394 + 102012530 AGCD01053481;AGCD01053482;GBDF01083780;XM_005401112;XM_005401113;XM_013523036;XM_013523037 XP_005401169;XP_005401170;XP_013378490;XP_013378491 MODEL 10082211 protein-coding Cmc4 C-X9-C motif containing 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955594 618516 624780 + 106146244 AGCD01076436;XM_005414653 XP_005414710 MODEL 8841217 pseudo LOC102010460 40S ribosomal protein S14 pseudogene NW_004955463 13024771 13025227 - 102010460 AGCD01049860 MODEL 8836456 protein-coding Ago1 argonaute RISC component 1 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); double-stranded RNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN miRNA metabolic process (ortholog); miRNA processing (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); astigmatism (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955452 13935028 13967281 + 102023867 AGCD01044443;AGCD01044444;GBCE01137382;XM_005395161;XM_013519525 XP_005395218;XP_013374979 MODEL 8784756 protein-coding Cep20 centrosomal protein 20 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Thoracic Aortic Aneurysm 4 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955442 650033 665540 - 102027462 AGCD01037427;GBBH01141057;XM_005391079;XM_013517977 XP_005391136;XP_013373431 MODEL 8835305 protein-coding LOC102009725 sperm motility kinase Z-like NW_004955421 18237422 18307124 + 102009725 AGCD01022039;AGCD01022040;AGCD01022041;AGCD01022042;GBBH01067465;XM_005383799;XM_005383800;XM_013513643;XR_001233830 XP_005383856;XP_005383857;XP_013369097 MODEL 9044068 protein-coding Catspert catsper channel auxiliary subunit tau INVOLVED IN calcium ion transmembrane transport (ortholog); flagellated sperm motility (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN CatSper complex (ortholog); sperm flagellum (ortholog); sperm principal piece (ortholog) NW_004955493 8356859 8518863 - 102021457 AGCD01061292;AGCD01061293;AGCD01061294;AGCD01061295;AGCD01061296;AGCD01061297;AGCD01061298;AGCD01061299;AGCD01061300;AGCD01061301;AGCD01061302;AGCD01061303;AGCD01061304;AGCD01061305;AGCD01061306;AGCD01061307;GBDF01044480;XM_013504749 XP_013360203 MODEL 8814856 ncrna LOC102004241 uncharacterized LOC102004241 NW_004955407 29963859 29996079 + 102004241 AGCD01007621;GBDF01307914;XR_001231683;XR_259593 MODEL 8793311 protein-coding LOC102017758 apolipoprotein L3-like NW_004955413 22826454 22837555 - 102017758 AGCD01014317;GBBH01091386;XM_005379156 XP_005379213 MODEL 9001101 protein-coding Esm1 endothelial cell specific molecule 1 ENCODES a protein that exhibits hepatocyte growth factor receptor binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of hepatocyte growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Liver Neoplasms (ortholog); stomach cancer (ortholog) NW_004955446 12644220 12665351 + 102021812 AGCD01040239;GBBH01086228;XM_005392712 XP_005392769 MODEL 8700901 protein-coding LOC102003877 chromosome unknown open reading frame, human C16orf47 NW_004955484 5772487 5791070 - 102003877 AGCD01058271;XM_005415398 XP_005415455 MODEL 8760319 protein-coding Cd2 CD2 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); heterotypic cell-cell adhesion (ortholog); natural killer cell activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nephrotic syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955435 19861658 19876383 + 102004418 AGCD01033438;GBDF01020465;XM_005389045;XM_005389046;XM_013516558 XP_005389102;XP_005389103;XP_013372012 MODEL 8766864 pseudo LOC102008213 RWD domain-containing protein 1 pseudogene NW_004955472 2276716 2278452 - 102008213 AGCD01053451 MODEL 39133943 misc_rna 7SK 7SK RNA 8851553 pseudo LOC102009321 MORC family CW-type zinc finger protein 2A pseudogene NW_004955438 6361423 6366279 + 102009321 AGCD01035101 MODEL 8837874 protein-coding Kcnmb4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955405 10559074 10615744 + 102028156 AGCD01004816;GBCE01098046;GBCQ01067527;XM_005374310 XP_005374367 MODEL 8964005 pseudo LOC102007082 plastin-3 pseudogene NW_004955452 11705919 11707877 + 102007082 AGCD01044343 MODEL 8940560 protein-coding Col8a2 collagen type VIII alpha 2 chain INVOLVED IN camera-type eye morphogenesis (ortholog); epithelial cell proliferation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Corneal Dystrophy, Fuchs' Endothelial, 1 (ortholog); Fuchs' endothelial dystrophy (ortholog); genetic disease (ortholog) NW_004955452 14127654 14149582 - 102026826 AGCD01044452;GBCE01000327;XM_005395170 XP_005395227 MODEL 8767552 protein-coding Dis3l DIS3 like exosome 3'-5' exoribonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); enzyme binding (ortholog); exoribonuclease II activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); rRNA catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog) NW_004955450 9279323 9313402 - 102029577 AGCD01042589;AGCD01042590;GBDI01186429;GBDK01240217;XM_005393704 XP_005393761 MODEL 8840232 ncrna LOC102021851 uncharacterized LOC102021851 NW_004955457 14849296 14857146 - 102021851 AGCD01047085;GBDJ01370680;XR_262954 MODEL 8870865 protein-coding Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ENCODES a protein that exhibits beta-catenin binding (ortholog); protein phosphorylated amino acid binding (ortholog); ubiquitin ligase activator activity (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); mammary gland epithelial cell proliferation (ortholog); negative regulation of smoothened signaling pathway (ortholog); PARTICIPATES IN Hedgehog signaling pathway; nuclear factor kappa B signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955485 8724375 8846647 - 102026749 AGCD01058727;AGCD01058728;GBCB01021435;XM_005403874;XM_005403876;XM_005403877;XM_013504108;XM_013504109 XP_005403931;XP_005403933;XP_005403934;XP_013359562;XP_013359563 MODEL 8955348 protein-coding Cadm4 cell adhesion molecule 4 ENCODES a protein that exhibits protein phosphatase binding (ortholog); receptor tyrosine kinase binding (ortholog); vascular endothelial growth factor receptor 1 binding (ortholog); INVOLVED IN central nervous system myelination (ortholog); negative regulation of peptidyl-threonine phosphorylation (ortholog); negative regulation of peptidyl-tyrosine phosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell leading edge (ortholog); cell-cell contact zone (ortholog); Golgi membrane (ortholog) NW_004955555 1356143 1361404 - 102017067 AGCD01073074;GBDI01182821;XM_013508780 XP_013364234 MODEL 8713386 protein-coding Eif3k eukaryotic translation initiation factor 3 subunit K ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) NW_004955468 849149 858239 - 102012521 AGCD01051741;GBBH01000032;XM_005399841 XP_005399898 MODEL 8741443 pseudo LOC102006733 spindle and kinetochore-associated protein 2-like NW_004955403 19423695 19424310 - 102006733 AGCD01002125 MODEL 8726199 ncrna LOC102011238 uncharacterized LOC102011238 NW_004955435 16675032 16735309 - 102011238 AGCD01033336;AGCD01033337;GBDF01045771;XR_001234857;XR_001234858;XR_261711;XR_261713 MODEL 8828709 ncrna LOC102004597 uncharacterized LOC102004597 NW_004955415 12081312 12097999 + 102004597 AGCD01016184;GBCE01084010;XR_001233219;XR_001233220 MODEL 8926177 protein-coding Ccdc71 coiled-coil domain containing 71 NW_004955532 1150053 1153965 - 102010628 AGCD01070166;GBDJ01180456;XM_005410193;XM_005410194 XP_005410250;XP_005410251 MODEL 8888986 protein-coding Cdhr5 cadherin related family member 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN brush border assembly (ortholog); cell adhesion (ortholog); intermicrovillar adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955476 11435677 11442338 + 102014352 AGCD01055458;GBCQ01011365;XM_005401828;XM_005401829 XP_005401885;XP_005401886 MODEL 8780599 protein-coding Lipi lipase I ENCODES a protein that exhibits glycerophospholipase activity (ortholog); heparin binding (ortholog); INVOLVED IN lipid catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955407 16013285 16071187 - 102004244 AGCD01007202;AGCD01007203;AGCD01007204;AGCD01007205;GBDF01049474;GBDJ01190261;XM_013503778 XP_013359232 MODEL 9023590 protein-coding Aamp angio associated migratory cell protein ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN smooth muscle cell migration (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); melanoma (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955453 15104229 15109487 + 102014007 AGCD01044885;GBDF01047198;XM_005395659;XM_005395660 XP_005395716;XP_005395717 MODEL 9027750 pseudo LOC102011675 BTB/POZ domain-containing protein KCTD3 pseudogene NW_004955422 13339184 13342304 + 102011675 AGCD01022821 MODEL 8710812 protein-coding Hspbp1 HSPA (Hsp70) binding protein 1 ENCODES a protein that exhibits molecular sequestering activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955567 948040 960621 + 102028243 AGCD01074448;AGCD01074449;GBDF01051098;XM_005413338;XM_005413345;XM_013509270 XP_005413395;XP_005413402;XP_013364724 MODEL 10195714 ncrna LOC106149956 uncharacterized LOC106149956 NW_004955458 12865762 12870002 + 106149956 AGCD01047791;GBDF01252519;XR_001236451 MODEL 8970231 protein-coding Imp4 IMP U3 small nucleolar ribonucleoprotein 4 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN Mpp10 complex (ortholog); nucleolus (ortholog); preribosome (ortholog) NW_004955459 30502 33589 + 102012066 AGCD01047923;GBDF01049446;XM_005397541 XP_005397598 MODEL 8762067 protein-coding Trmt44 tRNA methyltransferase 44 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog) NW_004955514 2618671 2636822 - 102008970 AGCD01067085;GBBH01206510;XM_005408776 XP_005408833 MODEL 8964625 protein-coding LOC102005646 zinc finger protein 136-like NW_004955569 1261038 1282057 - 102005646 AGCD01074645;GBDI01011361;XM_005413498;XM_013509376 XP_005413555;XP_013364830 MODEL 8799856 pseudo LOC102008582 adiponectin receptor protein 1 pseudogene NW_004955446 6108606 6109553 - 102008582 AGCD01040087 MODEL 39132140 rrna 5S_rRNA 5S ribosomal RNA 8813303 protein-coding Chct1 CHD1 helical C-terminal domain containing 1 ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 1709938 1719278 + 102004882 AGCD01042979;AGCD01042980;GBDF01003863;XM_013519151 XP_013374605 MODEL 39134204 misc_rna 7SK 7SK RNA 8952039 protein-coding Adamtsl5 ADAMTS like 5 ENCODES a protein that exhibits heparin binding (ortholog); microfibril binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955764 4813 12653 + 102005545 AGCD01078306;GBDK01142911;XM_005415096;XM_013510187 XP_005415153;XP_013365641 MODEL 8770314 pseudo LOC102010465 acyl carrier protein, mitochondrial pseudogene NW_004955467 7728117 7728770 - 102010465 AGCD01051438;XM_005399383 MODEL 8976668 protein-coding Enpp5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 ENCODES a protein that exhibits NAD+ diphosphatase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN cell communication (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 11195846 11204000 - 102003483 AGCD01034569;GBDF01153945;XM_005389846 XP_005389903 MODEL 9041565 protein-coding Cmip c-Maf inducing protein INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955522 4128454 4314340 + 102005745 AGCD01068414;AGCD01068415;GBBH01087929;GBCE01118700;XM_005409360 XP_005409417 MODEL 39133808 misc_rna 7SK 7SK RNA 8841570 protein-coding Acer1 alkaline ceramidase 1 ENCODES a protein that exhibits N-acylsphingosine amidohydrolase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to calcium ion (ortholog); ceramide catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955495 3247170 3271417 + 102015861 AGCD01061843;AGCD01061844;GBCC01007225;XM_005405727 XP_005405784 MODEL 8761382 ncrna LOC102011240 uncharacterized LOC102011240 NW_004955435 21229107 21260847 + 102011240 AGCD01033474;GBDI01025489;XR_001234872;XR_261731;XR_261732 MODEL 8946639 protein-coding Catsperz catsper channel auxiliary subunit zeta INVOLVED IN flagellated sperm motility (ortholog); male meiotic nuclear division (ortholog); sperm capacitation (ortholog); FOUND IN CatSper complex (ortholog); cytoplasm (ortholog); sperm midpiece (ortholog) NW_004955422 20777488 20780765 - 102021989 AGCD01023087;GBDI01145184;XM_013514234 XP_013369688 MODEL 8956094 protein-coding Jmjd4 jumonji domain containing 4 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); peptidyl-lysine 4-dioxygenase activity (ortholog); INVOLVED IN positive regulation of translational termination (ortholog); protein hydroxylation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955581 525545 530589 + 102024068 AGCD01075676;GBCE01136389;GBDK01231362;XM_013509742;XM_013509743 XP_013365196;XP_013365197 MODEL 8784087 protein-coding Cd200r1 CD200 receptor 1 ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); signaling receptor activity (ortholog); INVOLVED IN heterotypic cell-cell adhesion (ortholog); negative regulation of interleukin-6 production (ortholog); negative regulation of macrophage migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955427 13143695 13148743 - 102029768 AGCD01027237;GBDK01229922;XM_013515164 XP_013370618 MODEL 8827187 protein-coding LOC102008214 putative olfactory receptor 52P1 NW_004955414 21691721 21692701 + 102008214 AGCD01015427;XM_005380500 XP_005380557 MODEL 8847718 protein-coding Fcn1 ficolin 1 ENCODES a protein that exhibits carbohydrate derivative binding (ortholog); G protein-coupled receptor binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cell surface pattern recognition receptor signaling pathway (ortholog); complement activation, lectin pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955513 3690550 3697785 - 102026140 AGCD01066908;GBDI01220302;XM_005408469;XM_005408470;XM_005408471;XM_013506743 XP_005408526;XP_005408527;XP_005408528;XP_013362197 MODEL 39131886 rrna 5S_rRNA 5S ribosomal RNA 8971258 protein-coding Col9a1 collagen type IX alpha 1 chain ENCODES a protein that exhibits carbohydrate binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cartilage development (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); aortic valve disease 2 (ortholog); aortic valve stenosis (ortholog); FOUND IN collagen type IX trimer (ortholog) NW_004955488 5296895 5384940 - 102025692 AGCD01059618;AGCD01059619;GBDI01105833;XM_005404469;XM_005404470;XM_013504448;XM_013504449 XP_005404526;XP_005404527;XP_013359902;XP_013359903 MODEL 8928554 protein-coding Cirsr corepressor of RBPJ and splicing regulator ENCODES a protein that exhibits histone deacetylase binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN centrosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955449 960524 993720 + 102007066 AGCD01041778;AGCD01041779;AGCD01041780;GBDF01118227;XM_005393189 XP_005393246 MODEL 8839720 protein-coding Igdcc3 immunoglobulin superfamily DCC subclass member 3 INVOLVED IN neuromuscular process controlling balance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955450 10087900 10121671 + 102007720 AGCD01042606;AGCD01042607;GBCE01023302;XM_013519046 XP_013374500 MODEL 8914419 protein-coding Atp8b3 ATPase phospholipid transporting 8B3 ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylserine floppase activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); phospholipid translocation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955495 6222764 6242104 + 102025922 AGCD01062058;AGCD01062059;AGCD01062060;AGCD01062061;GBDF01007630;XM_005405949;XM_005405950;XM_005405951;XM_005405952 XP_005406006;XP_005406007;XP_005406008;XP_005406009 MODEL 10275255 protein-coding Ankrd65 ankyrin repeat domain 65 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955486 9383502 9384519 + 106146596 AGCD01059179;GBDI01264717;GBDI01264722;XM_013504148 XP_013359602 MODEL 8719343 protein-coding Grid2 glutamate ionotropic receptor delta type subunit 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN cerebellar granule cell differentiation (ortholog); excitatory postsynaptic potential (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 18 (ortholog); cerebellar ataxia (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); ionotropic glutamate receptor complex (ortholog) NW_004955405 3291793 4411249 + 102014411 AGCD01004634;AGCD01004635;AGCD01004636;AGCD01004637;AGCD01004638;AGCD01004639;AGCD01004640;AGCD01004641;AGCD01004642;AGCD01004643;AGCD01004644;AGCD01004645;AGCD01004646;GBCE01036544;XM_005374673 XP_005374730 MODEL 8835142 ncrna LOC102004598 uncharacterized LOC102004598 NW_004955415 14680227 14691868 - 102004598 AGCD01016306;AGCD01016307;GBDJ01204578;XR_260294 MODEL 9042882 pseudo LOC102004247 ATP synthase subunit beta, mitochondrial-like NW_004955458 6124218 6126126 - 102004247 AGCD01047552 MODEL 8917032 protein-coding Ago2 argonaute RISC catalytic component 2 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); double-stranded RNA binding (ortholog); endoribonuclease activity, cleaving miRNA-paired mRNA (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); gene expression (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955461 14194268 14260949 - 102023879 AGCD01049048;GBDJ01349391;XM_005398054;XM_005398056;XM_005398057;XM_005398058;XM_005398059;XM_013521312;XM_013521313;XM_013521314 XP_005398111;XP_005398113;XP_005398114;XP_005398115;XP_005398116;XP_013376766;XP_013376767;XP_013376768 MODEL 8789403 pseudo LOC102017760 ribosome production factor 2 homolog pseudogene NW_004955414 220864 222594 + 102017760 AGCD01014711 MODEL 8844642 pseudo LOC102003880 transcription initiation factor TFIID subunit 7-like pseudogene NW_004955488 7941790 7996454 + 102003880 AGCD01059698;XM_005404481 MODEL 9051425 protein-coding Espl1 extra spindle pole bodies like 1, separase ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); separase-securin complex (ortholog) NW_004955458 530269 553919 + 102017308 AGCD01047132;AGCD01047133;GBDF01082490;XM_005397164;XM_005397165;XM_005397166;XM_005397167 XP_005397221;XP_005397222;XP_005397223;XP_005397224 MODEL 8951529 protein-coding Alkbh7 alkB homolog 7, RNA demethylase ENCODES a protein that exhibits oxidative RNA demethylase activity (ortholog); tRNA demethylase activity (ortholog); INVOLVED IN DNA damage response (ortholog); fatty acid metabolic process (ortholog); oxidative RNA demethylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955495 3220994 3222675 - 102015024 AGCD01061838;GBCQ01005961;XM_005405724 XP_005405781 MODEL 39133944 misc_rna 7SK 7SK RNA 8849818 ncrna LOC102009325 uncharacterized LOC102009325 NW_004955442 15855701 15859607 - 102009325 AGCD01037883;GBDF01303907;XR_262159 MODEL 8717155 pseudo LOC102007084 signal transducer CD24 pseudogene NW_004955406 23812162 23812599 - 102007084 AGCD01006185 MODEL 8779196 protein-coding Kcnn1 potassium calcium-activated channel subfamily N member 1 ENCODES a protein that exhibits calmodulin binding (ortholog); inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955524 3323188 3344321 - 102012122 AGCD01068882;AGCD01068883;AGCD01068884;GBCB01100685;GBDJ01092787;XM_013507269 XP_013362723 MODEL 8969485 protein-coding Dis3l2 DIS3 like 3'-5' exoribonuclease 2 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); magnesium ion binding (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN miRNA catabolic process (ortholog); mitotic cell cycle (ortholog); mitotic sister chromatid separation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); hepatoblastoma (ortholog); FOUND IN cytoplasm (ortholog); P-body (ortholog) NW_004955453 3558744 3851222 - 102017534 AGCD01044664;AGCD01044665;AGCD01044666;AGCD01044667;AGCD01044668;AGCD01044669;GBDK01278639;XM_005395381;XM_005395382;XM_005395383;XM_005395384;XM_005395385;XM_013519947 XP_005395438;XP_005395439;XP_005395440;XP_005395441;XP_005395442;XP_013375401 MODEL 8968225 protein-coding LOC102012862 2'-5'-oligoadenylate synthase 1-like NW_004955482 9327058 9336478 + 102012862 AGCD01057565;AGCD01081652;GBDI01244959;XM_005403208 XP_005403265 MODEL 8808503 protein-coding LOC102021855 olfactory receptor 6C3-like NW_004955458 2816076 2817020 - 102021855 AGCD01047245;XM_005397502 XP_005397559 MODEL 8908628 protein-coding Aqp1 aquaporin 1 (Colton blood group) ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); camera-type eye morphogenesis (ortholog); carbon dioxide transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Aquaporin 1 Deficiency (ortholog); FOUND IN ankyrin-1 complex (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955410 32066196 32078661 + 102023237 AGCD01011335;GBCQ01010363;XM_005377508 XP_005377565 MODEL 8735755 protein-coding Eif3l eukaryotic translation initiation factor 3 subunit L ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); viral translational termination-reinitiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955413 24220188 24250786 + 102011754 AGCD01014356;AGCD01014357;AGCD01014358;AGCD01014359;GBDF01002141;XM_005379230 XP_005379287 MODEL 8927295 protein-coding LOC102006734 cathelin-like NW_004956037 8257 8882 - 102006734 AGCD01078923;GBCE01101299;XM_013510217 XP_013365671 MODEL 8914164 protein-coding Trmt5 tRNA methyltransferase 5 INVOLVED IN mitochondrial tRNA methylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); combined oxidative phosphorylation deficiency 26 (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955466 8679795 8690203 + 102014123 AGCD01050997;GBBH01052220;XM_005399167;XM_013521928;XM_013521929;XM_013521930;XM_013521931 XP_005399224;XP_013377382;XP_013377383;XP_013377384;XP_013377385 MODEL 8895551 protein-coding Cep250 centrosomal protein 250 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); cilium assembly (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955422 25932377 25978524 - 102011674 AGCD01023273;GBDF01281795;XM_013514236;XM_013514237;XM_013514238 XP_013369690;XP_013369691;XP_013369692 MODEL 8807361 protein-coding Enpp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 ENCODES a protein that exhibits glycerophosphocholine cholinephosphodiesterase activity (ortholog); glycerophosphodiester phosphodiesterase activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN choline metabolic process (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955403 24528644 24788878 + 102007491 AGCD01002274;AGCD01002275;AGCD01002276;AGCD01002277;GBBH01100140;XM_005373495;XM_013513092;XM_013513095 XP_005373552;XP_013368546;XP_013368549 MODEL 8794582 protein-coding Atp8b4 ATPase phospholipid transporting 8B4 (putative) ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) NW_004955409 4148110 4383309 + 102005446 AGCD01009280;AGCD01009281;AGCD01009282;AGCD01009283;AGCD01009284;AGCD01009285;AGCD01009286;AGCD01009287;GBBH01111267;XM_005376677;XM_013510346;XM_013510347;XM_013510348;XM_013510349;XM_013510350;XM_013510351;XM_013510352;XM_013510353;XM_013510354 XP_005376734;XP_013365800;XP_013365801;XP_013365802;XP_013365803;XP_013365804;XP_013365805;XP_013365806;XP_013365807;XP_013365808 MODEL 8968014 protein-coding Ecrg4 ECRG4 augurin precursor ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cellular senescence (ortholog); G1 to G0 transition (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); dense core granule (ortholog) NW_004955470 10646585 10655311 + 102003533 AGCD01052873;GBDF01251056;XM_005400791;XM_013522789 XP_005400848;XP_013378243 MODEL 8782306 protein-coding Lipj lipase family member J ASSOCIATED WITH Breast Cancer, Familial (ortholog); pheochromocytoma/paraganglioma syndrome 1 (ortholog); stomach cancer (ortholog) NW_004955425 4337718 4368577 - 102023497 AGCD01025312;GBDF01225245;XM_005385874;XM_005385875;XM_013514896;XM_013514897;XM_013514898;XM_013514899;XM_013514900 XP_005385931;XP_005385932;XP_013370350;XP_013370351;XP_013370352;XP_013370353;XP_013370354 MODEL 8775972 protein-coding Aanat aralkylamine N-acetyltransferase ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); AP-3 adaptor complex binding (ortholog); aralkylamine N-acetyltransferase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); circadian rhythm (ortholog); melatonin biosynthetic process (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH advanced sleep phase syndrome (ortholog); cervical cancer (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955506 5828666 5834812 - 102024363 AGCD01065390;GBCB01082756;XM_005407430;XM_013506018;XM_013506019;XM_013506020;XM_013506021 XP_005407487;XP_013361472;XP_013361473;XP_013361474;XP_013361475 MODEL 8829883 pseudo LOC102011682 rho guanine nucleotide exchange factor 38-like NW_004955502 656842 673369 - 102011682 AGCD01064247 MODEL 8954322 protein-coding Bub1 BUB1 mitotic checkpoint serine/threonine kinase ENCODES a protein that exhibits histone H2A kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) NW_004955470 3152798 3190185 + 102007217 AGCD01052692;AGCD01052693;GBDF01156049;XM_005400628 XP_005400685 MODEL 9039765 protein-coding Hspd1 heat shock protein family D (Hsp60) member 1 ENCODES a protein that exhibits apolipoprotein A-I binding (ortholog); apolipoprotein binding (ortholog); cysteine-type endopeptidase activator activity (ortholog); INVOLVED IN adhesion of symbiont to host (ortholog); apoptotic mitochondrial changes (ortholog); B cell activation (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); coated vesicle (ortholog) NW_004955403 3062724 3073419 + 102014963 AGCD01001746;AGCD01001747;GBBH01032751;GBBH01032752;XM_013512058 XP_013367512 MODEL 8703550 ncrna LOC102005651 uncharacterized LOC102005651 NW_004955449 5758290 5762221 + 102005651 AGCD01041942;XR_262490 MODEL 8806967 protein-coding Impa1 inositol monophosphatase 1 ENCODES a protein that exhibits fructose-1-phosphatase activity (ortholog); glucose-1-phosphatase activity (ortholog); glucose-6-phosphatase activity (ortholog); INVOLVED IN phosphate-containing compound metabolic process (ortholog); phosphatidylinositol biosynthetic process (ortholog); signal transduction (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 59 (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955417 14114 40128 - 102023696 AGCD01017781;AGCD01017782;AGCD01017783;AGCD01017784;GBCQ01072950;XM_005381716;XM_013512813;XM_013512814 XP_005381773;XP_013368267;XP_013368268 MODEL 8880309 protein-coding Fcn3 ficolin 3 ENCODES a protein that exhibits antigen binding (ortholog); carbohydrate derivative binding (ortholog); identical protein binding (ortholog); INVOLVED IN complement activation (ortholog); complement activation, lectin pathway (ortholog); negative regulation of RNA biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); serine-type endopeptidase complex (ortholog) NW_004955452 6630548 6635334 - 102003722 AGCD01044117;GBDK01000209;XM_005394905 XP_005394962 MODEL 9022507 protein-coding Cadps calcium dependent secretion activator ENCODES a protein that exhibits calcium ion binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); protein kinase binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); catecholamine secretion (ortholog); neuronal dense core vesicle exocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); dense core granule (ortholog) NW_004955517 2965471 3420183 + 102025038 AGCD01067644;AGCD01067645;AGCD01067646;AGCD01067647;AGCD01067648;AGCD01067649;AGCD01067650;AGCD01067651;GBDF01239763;XM_013506934 XP_013362388 MODEL 8837733 protein-coding Col9a2 collagen type IX alpha 2 chain ENCODES a protein that exhibits protein homodimerization activity (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN collagen type IX trimer (ortholog) NW_004955537 139481 152866 - 102024610 AGCD01070853;GBCE01154173;XM_005410553 XP_005410610 MODEL 8955232 ncrna LOC102009731 uncharacterized LOC102009731 NW_004955495 6647375 6652586 + 102009731 AGCD01062086;GBDK01350689;XR_264167 MODEL 9008796 pseudo LOC102012863 FH1/FH2 domain-containing protein 1 pseudogene NW_004955485 3175160 3181031 - 102012863 AGCD01058533 MODEL 39134205 misc_rna 7SK 7SK RNA 8867349 protein-coding Ccdc71l coiled-coil domain containing 71 like NW_004955434 21505839 21509427 - 102018126 AGCD01032631;GBDI01041309;GBDK01201868;XM_013516289 XP_013371743 MODEL 8707748 protein-coding Chd1 chromodomain helicase DNA binding protein 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); gene expression (ortholog); host-mediated activation of viral transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nuclear chromosome (ortholog); nucleus (ortholog) NW_004955418 14200618 14268361 + 102007339 AGCD01019069;GBBH01162092;GBCQ01088613;XM_005382216 XP_005382273 MODEL 8859713 protein-coding Cmklr1 chemerin chemokine-like receptor 1 ENCODES a protein that exhibits adipokinetic hormone binding (ortholog); adipokinetic hormone receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of interleukin-12 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); granulosa cell tumor (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955455 9587421 9638602 - 102023434 AGCD01045923;AGCD01045924;AGCD01045925;AGCD01045926;GBDK01238966;XM_013520445;XM_013520446;XM_013520447;XM_013520448;XM_013520449 XP_013375899;XP_013375900;XP_013375901;XP_013375902;XP_013375903 MODEL 39133809 misc_rna 7SK 7SK RNA 9033046 protein-coding LOC102010472 olfactory receptor 688 NW_004955414 21882234 21901979 + 102010472 AGCD01015436;XM_005380504 XP_005380561 MODEL 8816133 protein-coding Acer2 alkaline ceramidase 2 ENCODES a protein that exhibits N-acylsphingosine amidohydrolase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); ceramide catabolic process (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955434 21786857 21810648 + 102027892 AGCD01032655;AGCD01032656;GBCE01104129;GBDF01113399;XM_005388734 XP_005388791 MODEL 9042292 protein-coding Gfm2 GTP dependent ribosome recycling factor mitochondrial 2 ENCODES a protein that exhibits GTPase activity (ortholog); translation elongation factor activity (ortholog); INVOLVED IN mitochondrial translation (ortholog); mitochondrial translational elongation (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN mitochondrion (ortholog) NW_004955425 25904020 25942384 + 102030098 AGCD01025939;GBDF01192750;XM_005386062;XM_005386064;XM_013514801 XP_005386119;XP_005386121;XP_013370255 MODEL 9039610 protein-coding LOC102011242 triggering receptor expressed on myeloid cells 1 NW_004955437 7849199 7863437 - 102011242 AGCD01034469;AGCD01034470;GBDJ01061958;XM_005389685;XM_013517118 XP_005389742;XP_013372572 MODEL 8957402 protein-coding LOC102017764 olfactory receptor 51E2 NW_004955414 20281445 20282910 - 102017764 AGCD01015367;XM_005380055 XP_005380112 MODEL 8944882 protein-coding Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN fatty acid homeostasis (ortholog); lipid digestion (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); prostate cancer (ortholog); FOUND IN Golgi apparatus (ortholog); microvillus (ortholog); plasma membrane (ortholog) NW_004955506 3151133 3154613 - 102025145 AGCD01065313;XM_005407509 XP_005407566 MODEL 8723867 protein-coding Cd207 CD207 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); INVOLVED IN defense response to virus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955424 14355739 14361326 + 102030441 AGCD01024652;GBDF01019779;XM_005385607 XP_005385664 MODEL 39133945 misc_rna 7SK 7SK RNA 8989909 ncrna LOC102008215 uncharacterized LOC102008215 NW_004955415 2147670 2175932 + 102008215 AGCD01015895;AGCD01015896;AGCD01015897;AGCD01015898;GBDK01355203;XR_260259 MODEL 39131744 rrna 5S_rRNA 5S ribosomal RNA 8978326 protein-coding Cisd1 CDGSH iron sulfur domain 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); identical protein binding (ortholog); L-cysteine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN protein maturation (ortholog); regulation of cellular respiration (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955425 12009704 12020956 + 102008748 AGCD01025498;GBDF01002017;GBDI01061945;XM_013514872 XP_013370326 MODEL 39132143 rrna 5S_rRNA 5S ribosomal RNA 8905729 protein-coding LOC102008583 olfactory receptor 2J3-like NW_004955576 1306942 1307865 + 102008583 AGCD01075370;XM_005413944 XP_005414001 MODEL 8970017 protein-coding Igdcc4 immunoglobulin superfamily DCC subclass member 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Developmental Disabilities (ortholog); hydronephrosis (ortholog) NW_004955450 10057064 10083484 + 102007393 AGCD01042604;AGCD01042605;GBCB01074217;GBDJ01043120;XM_013518877 XP_013374331 MODEL 8736502 protein-coding Adap1 ArfGAP with dual PH domains 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955460 8635463 8674455 - 102013805 AGCD01048528;AGCD01048529;GBBH01150083;GBCB01109073;XM_005397794 XP_005397851 MODEL 8866682 protein-coding LOC102021856 small integral membrane protein 10-like protein 2A NW_004955460 13310462 13331180 + 102021856 AGCD01048680;XM_005397892 XP_005397949 MODEL 8743554 protein-coding Ankrd66 ankyrin repeat domain 66 NW_004955437 11578962 11589164 + 102008981 AGCD01034578;GBDJ01388364;XM_013517100 XP_013372554 MODEL 8812610 pseudo LOC102006737 acyl carrier protein, mitochondrial pseudogene NW_004955452 9572395 9574890 - 102006737 AGCD01044240 MODEL 8976223 protein-coding Impa2 inositol monophosphatase 2 ENCODES a protein that exhibits glucose-1-phosphatase activity (ortholog); glycerol-2-phosphatase activity (ortholog); inositol monophosphate 1-phosphatase activity (ortholog); INVOLVED IN response to lithium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955402 1119376 1143589 - 102015360 AGCD01000048;GBDI01175847;XM_005372574 XP_005372631 MODEL 8958388 ncrna LOC102004599 uncharacterized LOC102004599 NW_004955415 30427848 30429710 + 102004599 AGCD01016664;GBDF01085687;XR_260328 MODEL 8755389 pseudo LOC102004250 nucleophosmin pseudogene NW_004955409 17023845 17033338 - 102004250 AGCD01009756;AGCD01009757;AGCD01009758;XM_005377160 MODEL 8999884 protein-coding Ago3 argonaute RISC catalytic component 3 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); endoribonuclease activity, cleaving miRNA-paired mRNA (ortholog); miRNA binding (ortholog); INVOLVED IN miRNA processing (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN condensed nuclear chromosome (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955452 13977487 14108729 + 102024642 AGCD01044446;AGCD01044447;AGCD01044448;AGCD01044449;AGCD01044450;GBDJ01416321;XM_005395164;XM_013519526;XM_013519527;XM_013519528;XM_013519529;XM_013519530;XR_262685 XP_005395221;XP_013374980;XP_013374981;XP_013374982;XP_013374983;XP_013374984 MODEL 8780852 protein-coding Chd1l chromodomain helicase DNA binding protein 1 like ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); histone reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH Alport syndrome (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955568 1132594 1189176 - 102015060 AGCD01074541;AGCD01074542;AGCD01074543;GBDF01157291;XM_005413466;XM_005413468 XP_005413523;XP_005413525 MODEL 8832769 protein-coding Alkbh8 alkB homolog 8, tRNA methyltransferase ENCODES a protein that exhibits iron ion binding (ortholog); tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity (ortholog); tRNA (uridine) methyltransferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); tRNA methylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955412 9875905 9923728 - 102030164 AGCD01012749;AGCD01012750;GBDK01061326;XM_005378030;XM_013511121;XM_013511122 XP_005378087;XP_013366575;XP_013366576 MODEL 9060732 ncrna LOC102009328 uncharacterized LOC102009328 NW_004955558 871030 888543 + 102009328 AGCD01073396;AGCD01073397;AGCD01073398;AGCD01073399;GBDF01225099;XR_001232328;XR_001232329 MODEL 9040810 protein-coding Cdin1 CDAN1 interacting nuclease 1 INVOLVED IN erythrocyte differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congenital dyserythropoietic anemia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955416 3805968 4014328 + 102003651 AGCD01016878;GBDF01013590;XM_005381186;XM_013512674;XM_013512675;XM_013512676 XP_005381243;XP_013368128;XP_013368129;XP_013368130 MODEL 8973442 protein-coding Kcnn2 potassium calcium-activated channel subfamily N member 2 ENCODES a protein that exhibits alpha-actinin binding (ortholog); calcium-activated potassium channel activity (ortholog); calmodulin binding (ortholog); INVOLVED IN membrane repolarization during atrial cardiac muscle cell action potential (ortholog); modulation of chemical synaptic transmission (ortholog); monoatomic ion transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); atrial fibrillation (ortholog); cardiac arrest (ortholog); FOUND IN cell surface (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955408 34223523 34366191 + 102020768 AGCD01008898;AGCD01008899;AGCD01008900;AGCD01008901;GBDJ01115690;XM_013506903;XM_013506905 XP_013362357;XP_013362359 MODEL 8831526 pseudo LOC102017767 UAP56-interacting factor pseudogene NW_004955472 3663252 3663988 + 102017767 AGCD01053517 MODEL 39133946 misc_rna 7SK 7SK RNA 8824667 protein-coding Cadps2 calcium dependent secretion activator 2 INVOLVED IN cellular response to starvation (ortholog); hematopoietic stem cell homeostasis (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955479 3961877 4485710 - 102011765 AGCD01056313;AGCD01056314;AGCD01056315;AGCD01056316;AGCD01056317;AGCD01056318;AGCD01056319;AGCD01056320;AGCD01056321;AGCD01056322;AGCD01056323;GBBH01051665;GBBH01051672;XM_013503273 XP_013358727 MODEL 8902496 protein-coding Grid2ip Grid2 interacting protein INVOLVED IN long-term synaptic depression (ortholog); regulation of postsynaptic cytosolic calcium ion concentration (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955460 13161761 13189175 + 102019986 AGCD01048674;GBCQ01140437;XM_005397888;XM_005397889;XM_013521105;XM_013521106;XM_013521107;XM_013521108 XP_005397945;XP_005397946;XP_013376559;XP_013376560;XP_013376561;XP_013376562 MODEL 39134206 misc_rna 7SK 7SK RNA 8827863 protein-coding LOC102003881 olfactory receptor-like protein OLF3 NW_004955491 257421 258371 + 102003881 AGCD01060325;XM_005404721 XP_005404778 MODEL 39133810 misc_rna 7SK 7SK RNA 8888469 protein-coding Espn espin ENCODES a protein that exhibits actin filament binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); locomotory behavior (ortholog); microvillar actin bundle assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 28 (ortholog); autosomal recessive nonsyndromic deafness 36 (ortholog); FOUND IN actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog); brush border (ortholog) NW_004955486 6130190 6156859 - 102025585 AGCD01059108;AGCD01059109;GBDF01000176;GBDF01000177;XM_013504283 XP_013359737 MODEL 8959207 protein-coding LOC102007088 uncharacterized LOC102007088 NW_004955459 3561454 3572591 - 102007088 AGCD01048015;GBDF01086912;XM_013521036 XP_013376490 MODEL 8989934 protein-coding Impact impact RWD domain protein ENCODES a protein that exhibits actin binding (ortholog); protein sequestering activity (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955402 12752748 12781238 + 102010754 AGCD01000403;GBCB01110995;XM_005372721;XM_013504956 XP_005372778;XP_013360410 MODEL 9007323 protein-coding Lipk lipase family member K ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955425 4215214 4247584 - 102021147 AGCD01025310;GBCC01021426;XM_005385864;XM_005385865;XM_005385866;XM_005385868;XM_013514918;XM_013514919 XP_005385921;XP_005385922;XP_005385923;XP_005385925;XP_013370372;XP_013370373 MODEL 9034821 protein-coding Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator INVOLVED IN negative regulation of angiogenesis (ortholog); positive regulation of endothelial cell apoptotic process (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955418 1108805 1116338 + 102018288 AGCD01018709;GBCE01053616;XM_005382071;XM_013512910 XP_005382128;XP_013368364 MODEL 9059176 protein-coding Disc1 DISC1 scaffold protein ENCODES a protein that exhibits identical protein binding (ortholog); kinesin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in forebrain (ortholog); cerebral cortex radially oriented cell migration (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Asperger syndrome (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); cell body (ortholog); central region of growth cone (ortholog) NW_004955492 6946528 7239328 - 102005813 AGCD01060775;AGCD01060776;AGCD01060777;AGCD01060778;AGCD01060779;GBDK01247100;XM_013504736 XP_013360190 MODEL 8798300 ncrna LOC102008216 uncharacterized LOC102008216 NW_004955474 1145810 1151690 + 102008216 AGCD01054239;GBDJ01195565;XR_001230733 MODEL 8929461 protein-coding Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN metaphase/anaphase transition of mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); protein localization to chromosome, centromeric region (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955416 7105302 7159121 + 102015008 AGCD01016963;AGCD01016964;AGCD01016965;AGCD01016966;GBDF01053678;XM_005381216;XM_005381217;XM_005381218;XM_013512666;XM_013512667 XP_005381273;XP_005381274;XP_005381275;XP_013368120;XP_013368121 MODEL 8792864 protein-coding Eif3m eukaryotic translation initiation factor 3 subunit M ENCODES a protein that exhibits translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN translation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) NW_004955476 10594670 10612448 + 102029287 AGCD01055424;AGCD01055425;AGCD01055426;GBDF01043875;XM_005401783;XM_013502983 XP_005401840;XP_013358437 MODEL 8710676 protein-coding Cisd2 CDGSH iron sulfur domain 2 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); regulation of autophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); type 2 diabetes mellitus (ortholog); Wolfram syndrome 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955496 5656686 5672888 - 102015646 AGCD01062355;AGCD01062356;GBCE01053957;XM_005406245 XP_005406302 MODEL 8944805 protein-coding Col9a3 collagen type IX alpha 3 chain ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN female gonad development (ortholog); male gonad development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); Autoinflammation, Immune Dysregulation, and Eosinophilia (ortholog); Camurati-Engelmann disease (ortholog); FOUND IN collagen type IX trimer (ortholog) NW_004955528 1286314 1305863 - 102024161 AGCD01069558;GBBH01203176;XM_005410012 XP_005410069 MODEL 8844879 protein-coding Hspg2 heparan sulfate proteoglycan 2 ENCODES a protein that exhibits collagen V binding (ortholog); dystroglycan binding (ortholog); protease binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); brain development (ortholog); cardiac muscle tissue development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); blepharophimosis (ortholog); FOUND IN basement membrane; extracellular matrix (ortholog); extracellular region (ortholog) NW_004955452 2056428 2141937 - 102011947 AGCD01043876;AGCD01043877;GBDJ01025170;XM_013519588;XM_013519589 XP_013375042;XP_013375043 MODEL 8975448 protein-coding LOC102012865 olfactory receptor 4C12-like NW_004955422 140434 143718 - 102012865 AGCD01022395;XM_005383937 XP_005383994 MODEL 8821237 protein-coding LOC102011688 uncharacterized LOC102011688 NW_004955429 5818013 5828157 + 102011688 AGCD01028537;XM_013515350 XP_013370804 MODEL 8877079 protein-coding Cep290 centrosomal protein 290 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule minus-end binding (ortholog); INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); autistic disorder (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955405 25533037 25607021 - 102009343 AGCD01005177;GBDI01291866;XM_013518124;XM_013518127;XM_013518131 XP_013373578;XP_013373581;XP_013373585 MODEL 8948782 protein-coding Ankrd9 ankyrin repeat domain 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN intracellular copper ion homeostasis (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955538 1735898 1739827 - 102014829 AGCD01071083;AGCD01071084;GBCE01187202;GBDF01001658;XM_013507881 XP_013363335 MODEL 8796948 protein-coding Atp9a ATPase phospholipid transporting 9A ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN negative regulation of exosomal secretion (ortholog); neuron projection morphogenesis (ortholog); regulation of endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); late endosome (ortholog) NW_004955445 6876937 6991513 + 102018538 AGCD01039527;AGCD01039528;AGCD01039529;AGCD01039530;AGCD01039531;GBCB01044420;XM_005392293;XM_013518319;XM_013518320;XM_013518321 XP_005392350;XP_013373773;XP_013373774;XP_013373775 MODEL 8751822 protein-coding Cmklr2 chemerin chemokine-like receptor 2 ENCODES a protein that exhibits adipokinetic hormone binding (ortholog); adipokinetic hormone receptor activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN G protein-coupled receptor complex (ortholog); plasma membrane (ortholog) NW_004955457 8774922 8831843 + 102016784 AGCD01046918;AGCD01046919;GBCE01131956;XM_005396997;XM_013520684;XM_013520685;XM_013520686;XR_001236393 XP_005397054;XP_013376138;XP_013376139;XP_013376140 MODEL 9022719 pseudo LOC102006739 40S ribosomal protein S4, X isoform-like NW_004955453 3829718 3830520 + 102006739 AGCD01044669 MODEL 8826602 protein-coding LOC102010478 translation initiation factor IF-2-like NW_004955415 26656571 26658785 + 102010478 AGCD01016602;GBDF01082702;XM_013512111 XP_013367565 MODEL 8988138 ncrna LOC102004602 uncharacterized LOC102004602 NW_004955418 11360846 11376911 + 102004602 AGCD01019002;GBDF01041709;XR_260555 MODEL 8769646 pseudo LOC102011246 rRNA-processing protein FCF1 homolog pseudogene NW_004955438 12170534 12171127 - 102011246 AGCD01035254 MODEL 8922097 protein-coding LOC102004253 kinesin-associated protein 3 NW_004955462 6220175 6390544 - 102004253 AGCD01049277;AGCD01049278;AGCD01049279;AGCD01049280;GBDI01178752;XM_005398164;XM_005398165;XM_005398168;XM_005398169;XM_013521457;XM_013521458 XP_005398221;XP_005398222;XP_005398225;XP_005398226;XP_013376911;XP_013376912 MODEL 8749082 protein-coding Allc allantoicase ENCODES a protein that exhibits allantoicase activity (ortholog); INVOLVED IN response to calcium ion (ortholog); response to magnesium ion (ortholog); response to pH (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955487 3757362 3774067 - 102016601 AGCD01059293;GBDF01007362;XM_005404369;XM_005404370 XP_005404426;XP_005404427 MODEL 8990979 protein-coding Cd22 CD22 molecule ENCODES a protein that exhibits CD4 receptor binding (ortholog); protein phosphatase binding (ortholog); sialic acid binding (ortholog); INVOLVED IN B cell activation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); external side of plasma membrane (ortholog) NW_004955468 4609601 4622601 + 102016690 AGCD01051918;GBDI01170491;XM_005400044;XM_005400045;XM_005400046;XM_005400047;XM_005400048;XM_005400049;XM_013522532 XP_005400101;XP_005400102;XP_005400103;XP_005400104;XP_005400105;XP_005400106;XP_013377986 MODEL 8721762 pseudo LOC102008585 U6 snRNA-associated Sm-like protein LSm3 pseudogene NW_004955583 83314 85152 - 102008585 AGCD01075793 MODEL 39133947 misc_rna 7SK 7SK RNA 8954481 protein-coding Kcnn3 potassium calcium-activated channel subfamily N member 3 ENCODES a protein that exhibits calmodulin binding (ortholog); inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; schizophrenia pathway; ASSOCIATED WITH atrial fibrillation (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); filopodium (ortholog) NW_004955545 1212240 1374189 - 102014609 AGCD01071848;AGCD01071849;AGCD01071850;AGCD01071851;GBDJ01278250;XM_005411527;XM_013508360;XM_013508361;XR_001232197 XP_005411584;XP_013363814;XP_013363815 MODEL 8815151 protein-coding Trmt6 tRNA methyltransferase 6 non-catalytic subunit INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); tRNA (m1A) methyltransferase complex (ortholog) NW_004955415 16333766 16390112 - 102016916 AGCD01016376;AGCD01016377;AGCD01016378;AGCD01016379;GBCQ01122321;XM_005380851;XM_005380852;XM_013512262 XP_005380908;XP_005380909;XP_013367716 MODEL 9046719 protein-coding Cav1 caveolin 1 ENCODES a protein that exhibits ATPase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiotensin-activated signaling pathway (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN insulin signaling pathway; platelet-derived growth factor signaling pathway; reverse cholesterol transport pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acanthosis nigricans (ortholog); acoustic neuroma (ortholog); FOUND IN acrosomal membrane (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955432 22258262 22292403 + 102011898 AGCD01031252;AGCD01031253;GBDI01017658;GBDK01011537;XM_005388120 XP_005388177 MODEL 8963615 protein-coding Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3R2 demethylase activity (ortholog); histone H4R3 demethylase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); blood vessel development (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955506 5577735 5588307 + 102019089 AGCD01065374;GBDF01089437;XM_005407413;XM_005407414;XM_005407415;XM_013506024;XM_013506025 XP_005407470;XP_005407471;XP_005407472;XP_013361478;XP_013361479 MODEL 8879226 protein-coding Ccdc73 coiled-coil domain containing 73 ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog) NW_004955476 10612530 10726343 - 102028961 AGCD01055426;AGCD01055427;AGCD01055428;GBDF01224614;GBDF01224619;XM_013502982 XP_013358436 MODEL 8738804 protein-coding Igf1 insulin like growth factor 1 ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); insulin receptor binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); PARTICIPATES IN altered insulin-like growth factor signaling pathway; cardiovascular system disease pathway; ceramide signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acromegaly (ortholog); acute kidney failure (ortholog); FOUND IN alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog); exocytic vesicle (ortholog); extracellular region (ortholog) NW_004955405 37505830 37582152 - 102004234 AGCD01005457;GBDJ01018907;XM_005374571;XM_013518800;XM_013518804;XM_013518808;XM_013518811;XM_013518813;XM_013518816;XM_013518821 XP_005374628;XP_013374254;XP_013374258;XP_013374262;XP_013374265;XP_013374267;XP_013374270;XP_013374275 MODEL 8769915 protein-coding Adap2 ArfGAP with dual PH domains 2 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN heart development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial envelope (ortholog); plasma membrane (ortholog) NW_004955481 7068217 7094946 + 102022817 AGCD01057052;AGCD01057053;GBCE01023889;GBDJ01233818;XM_013503464 XP_013358918 MODEL 8799099 protein-coding Acer3 alkaline ceramidase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN ceramide catabolic process (ortholog); inflammatory response (ortholog); myelination (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955414 14741027 14846931 - 102012949 AGCD01015156;AGCD01015157;AGCD01015158;AGCD01015159;AGCD01015160;GBCB01075983;GBDF01123305;XM_005379846 XP_005379903 MODEL 9019696 protein-coding Aar2 AAR2 splicing factor PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); Developmental Disabilities (ortholog); microcephaly (ortholog) NW_004955422 25306056 25335572 - 102027198 AGCD01023248;GBDF01032600;XM_005384752;XM_013514311 XP_005384809;XP_013369765 MODEL 39133811 misc_rna 7SK 7SK RNA 8946968 protein-coding Ensa endosulfine alpha ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN regulation of insulin secretion (ortholog); response to glucose (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 197239 204867 + 102010046 AGCD01013444;GBDK01006530;XM_005378669;XM_005378670;XM_013511414;XM_013511415 XP_005378726;XP_005378727;XP_013366868;XP_013366869 MODEL 10070073 protein-coding LOC106149957 uncharacterized LOC106149957 NW_004955458 15204473 15214967 - 106149957 AGCD01047874;AGCD01047875;AGCD01047876;GBBH01193369;GBDK01117171;XM_013520901 XP_013376355 MODEL 8885451 ncrna LOC102006744 uncharacterized LOC102006744 NW_004955408 16899632 16911435 - 102006744 AGCD01008448;GBBH01062027;XR_001232354 MODEL 39131745 rrna 5S_rRNA 5S ribosomal RNA 9009435 protein-coding LOC102007094 uncharacterized LOC102007094 NW_004955411 33570 60551 + 102007094 AGCD01011450;XM_013510711 XP_013366165 MODEL 39132146 rrna 5S_rRNA 5S ribosomal RNA 8927373 protein-coding Aqp10 aquaporin 10 ENCODES a protein that exhibits glycerol channel activity (ortholog); water channel activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); protein homotetramerization (ortholog); response to toxic substance (ortholog); PARTICIPATES IN water transport pathway; FOUND IN apical plasma membrane (ortholog); lipid droplet (ortholog); plasma membrane (ortholog) NW_004955545 845749 848738 + 102011591 AGCD01071820;XM_005411519 XP_005411576 MODEL 8753937 protein-coding Cdip1 cell death inducing p53 target 1 INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic side of late endosome membrane (ortholog); cytoplasmic side of lysosomal membrane (ortholog) NW_004955442 12895403 12913517 + 102007470 AGCD01037748;GBDK01139151;XM_005391281;XM_005391282;XM_005391283;XM_005391284;XM_005391285;XM_005391286;XM_005391287 XP_005391338;XP_005391339;XP_005391340;XP_005391341;XP_005391342;XP_005391343;XP_005391344 MODEL 8712870 protein-coding Fcrl1 Fc receptor like 1 ENCODES a protein that exhibits coreceptor activity (ortholog); INVOLVED IN B cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955468 9641739 9660743 - 102018819 AGCD01052052;GBDK01419337;XM_005400129;XM_005400130;XM_005400131;XM_005400132 XP_005400186;XP_005400187;XP_005400188;XP_005400189 MODEL 9031861 ncrna LOC102017768 uncharacterized LOC102017768 NW_004955474 2920107 2934356 - 102017768 AGCD01054312;AGCD01054313;AGCD01054314;GBDF01015351;XR_001230742;XR_263592 MODEL 8897957 ncrna LOC102008217 uncharacterized LOC102008217 NW_004955474 7214695 7216543 - 102008217 AGCD01054516;GBDF01280192;XR_263600 MODEL 8718794 ncrna LOC102021859 uncharacterized LOC102021859 NW_004955463 6152064 6152789 - 102021859 AGCD01049657;GBDF01145117;XR_001236626 MODEL 8802218 protein-coding Cisd3 CDGSH iron sulfur domain 3 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); metal ion binding (ortholog); INVOLVED IN protein maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 13814679 13817334 + 102018248 AGCD01043506;GBDJ01073229;XM_005394278 XP_005394335 MODEL 8794738 pseudo LOC102012868 ubiquitin-like modifier-activating enzyme 1 pseudogene NW_004955494 8277150 8278221 - 102012868 AGCD01061582 MODEL 8885623 protein-coding Gfod1 Gfo/Idh/MocA-like oxidoreductase domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955465 1235917 1338072 + 102011749 AGCD01050338;GBCB01074136;XM_005398800;XM_005398801;XM_005398803;XM_005398804;XM_013521857 XP_005398857;XP_005398858;XP_005398860;XP_005398861;XP_013377311 MODEL 8790923 protein-coding Cage1 cancer antigen 1 ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955465 6506177 6539094 + 102027730 AGCD01050443;AGCD01050444;GBDF01048849;XM_005398852;XM_005398853;XM_005398854;XM_005398855;XM_013521811;XM_013521812;XM_013521813;XM_013521814 XP_005398909;XP_005398910;XP_005398911;XP_005398912;XP_013377265;XP_013377266;XP_013377267;XP_013377268 MODEL 8725604 protein-coding Hsph1 heat shock protein family H (Hsp110) member 1 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN negative regulation of apoptotic signaling pathway (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide (ortholog); negative regulation of p38MAPK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955431 14680364 14706182 + 102017369 AGCD01030337;AGCD01030338;GBDF01153902;XM_005387734;XM_005387735;XM_013515821;XM_013515822;XM_013515823 XP_005387791;XP_005387792;XP_013371275;XP_013371276;XP_013371277 MODEL 8825045 protein-coding Ecsit ECSIT signaling integrator ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); mesoderm formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial complex I intermediate assembly complex (ortholog) NW_004955495 2375992 2385962 - 102025021 AGCD01061769;GBBH01098612;XM_005405668;XM_013505114;XM_013505115 XP_005405725;XP_013360568;XP_013360569 MODEL 39134207 misc_rna 7SK 7SK RNA 8964277 protein-coding Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); neuron remodeling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN neuron projection (ortholog) NW_004955437 2916598 3070771 + 102020375 AGCD01034292;AGCD01034293;AGCD01034294;AGCD01034295;AGCD01034296;GBDF01127878;XM_005389537;XM_005389538;XM_013516790;XM_013516791;XM_013516792;XM_013516793;XM_013516794;XM_013516795;XM_013516797;XM_013516798;XM_013516799 XP_005389594;XP_005389595;XP_013372244;XP_013372245;XP_013372246;XP_013372247;XP_013372248;XP_013372249;XP_013372251;XP_013372252;XP_013372253 MODEL 8927726 protein-coding Ago4 argonaute RISC component 4 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); miRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN male gonad development (ortholog); male meiotic nuclear division (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); epilepsy (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog) NW_004955452 13882416 13922590 + 102023551 AGCD01044442;AGCD01044443;GBBH01187718;GBBH01187721;XM_013519611 XP_013375065 MODEL 8860335 protein-coding Atp9b ATPase phospholipid transporting 9B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) NW_004955402 62231875 62537311 + 102022987 AGCD01001637;AGCD01001638;AGCD01001639;AGCD01001640;AGCD01001641;AGCD01001642;AGCD01001643;GBDF01045223;XM_005373105;XM_005373106;XM_005373107 XP_005373162;XP_005373163;XP_005373164 MODEL 9011618 protein-coding LOC102004603 disintegrin and metalloproteinase domain-containing protein 1a-like NW_004955482 8437339 8442885 + 102004603 AGCD01057520;GBDK01219783;XM_005403177 XP_005403234 MODEL 8957231 ncrna LOC102009732 uncharacterized LOC102009732 NW_004955424 3418563 3425506 - 102009732 AGCD01024310;GBDF01162625;XR_261036 MODEL 9055653 pseudo LOC102011252 coiled-coil domain-containing protein 94 pseudogene NW_004955549 1407026 1453477 + 102011252 AGCD01072448;AGCD01072449 MODEL 8936504 protein-coding Lipm lipase family member M ASSOCIATED WITH sarcoma (ortholog) NW_004955425 4150780 4170912 - 102020139 AGCD01025310;GBCC01000396;XM_005385861 XP_005385918 MODEL 8710483 protein-coding LOC102006745 chromosome unknown open reading frame, human C5orf24 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955408 30043402 30054015 + 102006745 AGCD01008792;AGCD01008793;GBDI01171520;XM_005376466;XM_005376467;XM_005376468 XP_005376523;XP_005376524;XP_005376525 MODEL 8927906 protein-coding LOC102005653 cytochrome c oxidase subunit 5A, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); mitochondrial complex IV deficiency nuclear type 20 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955450 3036387 3049121 + 102005653 AGCD01042420;GBCQ01008019;XM_005393528;XM_005393529 XP_005393585;XP_005393586 MODEL 8980825 ncrna LOC102008587 uncharacterized LOC102008587 NW_004955450 5676012 5702239 + 102008587 AGCD01042508;AGCD01042509;GBDF01280526;XR_001235879;XR_262532 MODEL 9051881 protein-coding Eif4a1 eukaryotic translation initiation factor 4A1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear stress granule (ortholog); nucleus (ortholog) NW_004955467 9344629 9351028 - 102008300 AGCD01051497;AGCD01051498;GBBH01001623;XM_013522083 XP_013377537 MODEL 8919508 protein-coding Colec10 collectin subfamily member 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); D-mannose binding (ortholog); INVOLVED IN complement activation, lectin pathway (ortholog); cranial skeletal system development (ortholog); positive regulation of opsonization (ortholog); ASSOCIATED WITH 3MC syndrome 3 (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955417 24954969 24994188 + 102005592 AGCD01018469;GBDF01130629;XM_005381907 XP_005381964 MODEL 8810106 protein-coding Grifin galectin-related inter-fiber protein NW_004955460 12813228 12814698 - 102023123 AGCD01048664;GBDI01006479;XM_005397969;XM_013521154 XP_005398026;XP_013376608 MODEL 8868178 protein-coding Kcnn4 potassium calcium-activated channel subfamily N member 4 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); calmodulin binding (ortholog); intermediate conductance calcium-activated potassium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cardiac muscle hypertrophy (ortholog); cell volume homeostasis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Acute Subdural Hematoma (ortholog); angiosarcoma (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); neuronal cell body (ortholog) NW_004955555 1493600 1509113 - 102021712 AGCD01073083;AGCD01073084;GBDI01261438;XM_005412459 XP_005412516 MODEL 8993024 protein-coding Cmpk1 cytidine/uridine monophosphate kinase 1 ENCODES a protein that exhibits CMP kinase activity (ortholog); dUMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN dCDP biosynthetic process (ortholog); dUDP biosynthetic process (ortholog); ovulation cycle process (ortholog); PARTICIPATES IN de novo pyrimidine biosynthetic pathway; gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955464 11179432 11213147 - 102029835 AGCD01050138;AGCD01050139;GBDF01053702;XM_013521734 XP_013377188 MODEL 8731340 protein-coding LOC102003886 olfactory receptor 4X1-like NW_004955422 269162 270091 - 102003886 AGCD01022401;XM_005384932 XP_005384989 MODEL 8774521 ncrna LOC102010491 uncharacterized LOC102010491 NW_004955486 2457928 2464475 + 102010491 AGCD01058997;GBDF01144358;XR_263941 MODEL 8897402 protein-coding Chd2 chromodomain helicase DNA binding protein 2 ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); hematopoietic stem cell differentiation (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); anodontia (ortholog); FOUND IN nucleus (ortholog) NW_004955416 21085570 21210321 + 102019061 AGCD01017496;AGCD01017497;AGCD01017498;GBDI01182725;XM_005381599 XP_005381656 MODEL 8751534 protein-coding Espnl espin like ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN stereocilium tip (ortholog) NW_004955542 2430610 2453738 - 102028235 AGCD01071522;GBBH01227849;XM_005411198 XP_005411255 MODEL 8944889 protein-coding Impdh1 inosine monophosphate dehydrogenase 1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); GMP biosynthetic process (ortholog); lymphocyte proliferation (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955479 9388241 9406717 - 102026109 AGCD01056463;AGCD01056464;GBCE01009782;XM_005402371 XP_005402428 MODEL 39133812 misc_rna 7SK 7SK RNA 8798678 protein-coding Alms1 ALMS1 centrosome and basal body associated protein ENCODES a protein that exhibits alpha-actinin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); Alstrom syndrome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955424 12130496 12258684 - 102015416 AGCD01024596;AGCD01024597;AGCD01024598;AGCD01024599;AGCD01024600;GBDF01000586;GBDF01000588;XM_013514678 XP_013370132 MODEL 8898293 protein-coding Disp1 dispatched RND transporter family member 1 ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); diaphragm development (ortholog); dorsal/ventral pattern formation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); epilepsy (ortholog); esophageal atresia (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955520 1591831 1711871 - 102014480 AGCD01068059;AGCD01068060;GBDF01195981;XM_005409242;XM_005409243;XM_005409244;XM_005409246;XM_013507055;XM_013507056 XP_005409299;XP_005409300;XP_005409301;XP_005409303;XP_013362509;XP_013362510 MODEL 8745866 protein-coding Bub3 BUB3 mitotic checkpoint protein INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); protein localization to kinetochore (ortholog); regulation of chromosome segregation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN kinetochore (ortholog); mitotic checkpoint complex (ortholog); nucleoplasm (ortholog) NW_004955477 1305937 1319330 + 102026634 AGCD01055504;GBDF01043135;XM_005401960;XM_005401961 XP_005402017;XP_005402018 MODEL 8924851 protein-coding LOC102007097 olfactory receptor 8B3-like NW_004955412 25257775 25259655 - 102007097 AGCD01013143;XM_005378418 XP_005378475 MODEL 8807278 protein-coding Htatip2 HIV-1 Tat interactive protein 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of programmed cell death (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein autophosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955476 1197053 1219679 + 102006027 AGCD01055201;AGCD01055202;GBDF01306860;XM_005401720;XM_005401721;XM_005401722 XP_005401777;XP_005401778;XP_005401779 MODEL 9034606 ncrna LOC102011689 uncharacterized LOC102011689 NW_004955511 5972095 5975480 + 102011689 AGCD01066594;XR_264436 MODEL 8938708 protein-coding Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase ENCODES a protein that exhibits alcohol binding (ortholog); carbohydrate binding (ortholog); CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity (ortholog); INVOLVED IN CDP-diacylglycerol metabolic process (ortholog); phosphatidylinositol biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955493 7087491 7091306 + 102006786 AGCD01061154;GBDF01195209;XM_005405232 XP_005405289 MODEL 8756714 protein-coding Cd226 CD226 molecule ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); positive regulation of Fc receptor mediated stimulatory signaling pathway (ortholog); positive regulation of immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Chronic Hepatitis C (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955402 53408861 53560896 - 102004342 AGCD01001364;AGCD01001365;AGCD01001366;AGCD01001367;AGCD01001368;AGCD01001369;AGCD01001370;GBDK01109733;XM_005373050;XM_013511304;XM_013511309;XM_013511315;XM_013511318;XM_013511325;XM_013511326;XM_013511335;XM_013511340 XP_005373107;XP_013366758;XP_013366763;XP_013366769;XP_013366772;XP_013366779;XP_013366780;XP_013366789;XP_013366794 MODEL 9024043 protein-coding Aqp11 aquaporin 11 ENCODES a protein that exhibits glycerol channel activity (ortholog); hydrogen peroxide channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN endosomal lumen acidification (ortholog); glycerol transmembrane transport (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955414 14245682 14260717 - 102009594 AGCD01015144;AGCD01015145;AGCD01015146;GBDF01161980;XM_005379835 XP_005379892 MODEL 9011666 pseudo LOC102006747 spermatid perinuclear RNA-binding protein-like NW_004955459 3238938 3257604 - 102006747 AGCD01048011;AGCD01048012 MODEL 8847126 ncrna LOC102009338 uncharacterized LOC102009338 NW_004955403 20129167 20220568 - 102009338 AGCD01002154;XR_259187 MODEL 8788014 protein-coding Cep295 centrosomal protein 295 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); positive regulation of centriole elongation (ortholog); positive regulation of centrosome duplication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955414 806238 860273 - 102020237 AGCD01014748;AGCD01014749;AGCD01014750;AGCD01014751;GBDK01318428;XM_013511832 XP_013367286 MODEL 8755348 protein-coding Igf1r insulin like growth factor 1 receptor ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); identical protein binding (ortholog); insulin binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta clearance (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adrenocortical carcinoma (ortholog); alcoholic neuropathy (ortholog); FOUND IN alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog); axon (ortholog); caveola (ortholog) NW_004955416 26101090 26382660 - 102029077 AGCD01017594;AGCD01017595;GBDJ01230004;XM_005381615;XM_013512515 XP_005381672;XP_013367969 MODEL 8877859 pseudo LOC102008588 tetratricopeptide repeat protein 14 pseudogene NW_004955402 62282155 62283653 - 102008588 AGCD01001640 MODEL 8708959 pseudo LOC102004256 archaemetzincin-2-like NW_004955463 752523 753108 + 102004256 AGCD01049497 MODEL 8700856 protein-coding Aars1 alanyl-tRNA synthetase 1 ENCODES a protein that exhibits alanine-tRNA ligase activity (ortholog); amino acid binding (ortholog); aminoacyl-tRNA deacylase activity (ortholog); INVOLVED IN alanyl-tRNA aminoacylation (ortholog); cerebellar Purkinje cell layer development (ortholog); negative regulation of neuron apoptotic process (ortholog); PARTICIPATES IN alanine metabolic pathway; lactic acidosis pathway; primary hyperoxaluria type 1 pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955484 3090678 3115224 - 102028968 AGCD01058154;GBCE01054191;XM_005403471;XM_013503929 XP_005403528;XP_013359383 MODEL 8909546 protein-coding Ache acetylcholinesterase (Cartwright blood group) ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholinesterase activity (ortholog); cholinesterase activity (ortholog); INVOLVED IN acetylcholine catabolic process (ortholog); acetylcholine metabolic process (ortholog); acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine metabolic pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute stress disorder (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN axolemma; dendrite; external side of plasma membrane NW_004955573 79606 85799 + 102008995 AGCD01074960;AGCD01074961;GBBH01208078;XM_005413673;XM_005413675;XM_005413676;XM_013509453;XM_013509454 XP_005413730;XP_005413732;XP_005413733;XP_013364907;XP_013364908 MODEL 39131746 rrna 5S_rRNA 5S ribosomal RNA 8855487 protein-coding Cmpk2 cytidine/uridine monophosphate kinase 2 ENCODES a protein that exhibits dTMP kinase activity (ortholog); dUMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); dTDP biosynthetic process (ortholog); dUDP biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); Idiopathic Basal Ganglia Calcification 10 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955487 2010126 2024804 + 102014054 AGCD01059256;GBDI01358147;XM_005404364 XP_005404421 MODEL 8862284 protein-coding LOC102010492 zinc finger protein 660 NW_004955420 26897949 26926759 - 102010492 AGCD01021435;GBDF01039917;XM_005383479;XM_013513416;XM_013513417;XM_013513418;XM_013513419;XM_013513420;XM_013513421;XM_013513422;XM_013513423 XP_005383536;XP_013368870;XP_013368871;XP_013368872;XP_013368873;XP_013368874;XP_013368875;XP_013368876;XP_013368877 MODEL 8964549 protein-coding Ect2 epithelial cell transforming 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); activation of protein kinase activity (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955420 2769542 2827843 + 102003552 AGCD01020608;AGCD01020609;GBDF01158253;XM_005383013;XM_005383014;XM_013513629;XM_013513630;XM_013513631 XP_005383070;XP_005383071;XP_013369083;XP_013369084;XP_013369085 MODEL 39132150 rrna 5S_rRNA 5S ribosomal RNA 8704236 protein-coding LOC102004604 olfactory receptor 1N1-like NW_004955419 5180021 5180950 - 102004604 AGCD01019787;XM_013513100 XP_013368554 MODEL 39133948 misc_rna 7SK 7SK RNA 8823222 protein-coding LOC102008222 olfactory receptor 50-like NW_004955419 5484750 5485697 - 102008222 AGCD01019814;XM_005382529 XP_005382586 MODEL 8899113 protein-coding LOC102011255 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1233166 1237734 - 102011255 AGCD01074465;GBDF01000430;XM_005413374 XP_005413431 MODEL 8877583 protein-coding Ccdc77 coiled-coil domain containing 77 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955454 6721624 6769223 - 102028494 AGCD01045263;AGCD01045264;AGCD01045265;AGCD01045266;AGCD01045267;AGCD01045268;GBBH01030599;GBDK01016879;XM_013520216 XP_013375670 MODEL 8867251 protein-coding Adar adenosine deaminase RNA specific ENCODES a protein that exhibits double-stranded RNA adenosine deaminase activity (ortholog); INVOLVED IN adenosine to inosine editing (ortholog); base conversion or substitution editing (ortholog); cellular response to virus (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 6 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) NW_004955545 1078319 1106938 - 102013119 AGCD01071836;AGCD01071837;GBCE01170194;XM_005411521;XM_005411522;XM_005411523;XM_005411524;XM_013508293 XP_005411578;XP_005411579;XP_005411580;XP_005411581;XP_013363747 MODEL 9048590 protein-coding LOC102012872 olfactory receptor 1I1 NW_004955495 8171204 8172145 - 102012872 AGCD01062187;XM_005406096 XP_005406153 MODEL 8739542 protein-coding Cish cytokine inducible SH2 containing protein INVOLVED IN cytokine-mediated signaling pathway (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-2 signaling pathway; interleukin-3 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Bacteremia (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955532 2380380 2386000 - 102014486 AGCD01070225;AGCD01070226;GBDF01280930;XM_005410305;XM_013507639 XP_005410362;XP_013363093 MODEL 8795560 protein-coding Calb1 calbindin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); INVOLVED IN cochlea development (ortholog); learning or memory (ortholog); locomotory behavior (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); bilirubin metabolic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN neuronal cell body; terminal bouton; axon (ortholog) NW_004955417 6944300 6969341 - 102011116 AGCD01017994;AGCD01017995;GBCQ01008880;XM_005381764 XP_005381821 MODEL 39134208 misc_rna 7SK 7SK RNA 8732119 protein-coding Cd24 CD24 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic nuclear changes (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); multiple sclerosis (ortholog); pancreatic cancer (ortholog); FOUND IN cell surface (ortholog); ciliary membrane (ortholog); external side of plasma membrane (ortholog) NW_004955411 32270881 32275236 - 102008202 AGCD01012298;GBDF01223492;XM_005377835 XP_005377892 MODEL 8965953 protein-coding Kcnq1 potassium voltage-gated channel subfamily Q member 1 ENCODES a protein that exhibits calmodulin binding (ortholog); delayed rectifier potassium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); atrial cardiac muscle cell action potential (ortholog); auditory receptor cell development (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Achlorhydria (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral part of cell (ortholog) NW_004955422 14212563 14544556 + 102009727 AGCD01022855;AGCD01022856;AGCD01022857;AGCD01022858;AGCD01022859;GBBH01026666;XM_005384206;XM_013514208;XM_013514209 XP_005384263;XP_013369662;XP_013369663 MODEL 10093347 ncrna LOC106149958 uncharacterized LOC106149958 NW_004955458 3546091 3548041 + 106149958 AGCD01047317;XR_001236452 MODEL 8848056 protein-coding Enthd1 ENTH domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); stomach cancer (ortholog) NW_004955413 25580200 25684390 - 102006446 AGCD01014409;AGCD01014410;AGCD01014411;AGCD01014412;GBCB01019792;XM_005379305;XM_013511604 XP_005379362;XP_013367058 MODEL 8763629 protein-coding Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN phosphatidic acid biosynthetic process (ortholog); positive regulation of cytokine production (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); exfoliation syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 633522 642659 - 102012574 AGCD01034152;GBBH01114504;XM_005389423;XM_005389424;XM_005389425 XP_005389480;XP_005389481;XP_005389482 MODEL 8998782 protein-coding LOC102009733 probable N-acetyltransferase CML1 NW_004955424 11899258 11900803 - 102009733 AGCD01024576;GBCQ01149453;XM_013514700 XP_013370154 MODEL 8879595 protein-coding Atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 ENCODES a protein that exhibits protein-containing complex stabilizing activity (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955464 11659761 11682651 + 102014431 AGCD01050160;GBDF01001378;XM_005398657;XM_005398659;XM_005398660;XM_005398661;XM_005398662;XM_005398663;XM_013521633;XR_001236686 XP_005398714;XP_005398716;XP_005398717;XP_005398718;XP_005398719;XP_005398720;XP_013377087 MODEL 8753085 pseudo LOC102017770 IST1 homolog NW_004955416 24322305 24340636 - 102017770 AGCD01017567 MODEL 39131747 rrna 5S_rRNA 5S ribosomal RNA 8790654 protein-coding Fcrl4 Fc receptor like 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); lymphoma (ortholog); FOUND IN cell surface (ortholog) NW_004955468 9478180 9503127 - 102016043 AGCD01052047;GBDK01219188;XM_005400119;XM_013522502;XM_013522504;XM_013522505;XM_013522506 XP_005400176;XP_013377956;XP_013377958;XP_013377959;XP_013377960 MODEL 8712506 ncrna LOC102007099 uncharacterized LOC102007099 NW_004955413 26714 54739 + 102007099 AGCD01013432;AGCD01013433;AGCD01013434;AGCD01013435;GBDF01192955;XR_001232930;XR_260037 MODEL 8973023 protein-coding Trmt61a tRNA methyltransferase 61A ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); tRNA (adenine(58)-N1)-methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Cornelia de Lange syndrome (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN tRNA (m1A) methyltransferase complex (ortholog) NW_004955538 2383666 2393667 + 102010944 AGCD01071124;GBDI01164437;XM_005410781 XP_005410838 MODEL 8952464 protein-coding LOC102021862 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase-like NW_004955465 3746876 3764999 - 102021862 AGCD01050389;AGCD01050390;AGCD01050391;GBBH01167444;XM_005398838 XP_005398895 MODEL 9016095 ncrna LOC102011691 uncharacterized LOC102011691 NW_004955432 22073703 22077752 + 102011691 AGCD01031246;GBDF01194467;XR_001234645 MODEL 8864543 protein-coding Eif4a2 eukaryotic translation initiation factor 4A2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of RNA-dependent RNA polymerase activity (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955420 20967848 20974093 - 102028639 AGCD01021117;AGCD01021118;GBDF01010972;XM_005415364 XP_005415421 MODEL 8734345 protein-coding Htatsf1 HIV-1 Tat specific factor 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); poly-ADP-D-ribose modification-dependent protein binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); mRNA splicing, via spliceosome (ortholog); protein localization to site of double-strand break (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955489 8607649 8622044 - 102013092 AGCD01060020;AGCD01060021;GBBH01229626;GBDI01223809;XM_005404589 XP_005404646 MODEL 8914555 ncrna LOC102003895 uncharacterized LOC102003895 NW_004955429 23679053 23685472 + 102003895 AGCD01029078;GBDF01277697;XR_001234522;XR_261397 MODEL 9050567 protein-coding Ccdc78 coiled-coil domain containing 78 INVOLVED IN de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); centronuclear myopathy (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); deuterosome (ortholog) NW_004955442 16478219 16482452 + 102017819 AGCD01037901;GBDF01222967;XM_005391612;XM_005391613;XM_013517748;XM_013517749;XM_013517750;XM_013517751;XM_013517752;XM_013517754 XP_005391669;XP_005391670;XP_013373202;XP_013373203;XP_013373204;XP_013373205;XP_013373206;XP_013373208 MODEL 8881689 protein-coding Chd3 chromodomain helicase DNA binding protein 3 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN centrosome cycle (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autistic disorder (ortholog); basal cell carcinoma (ortholog); bipolar disorder (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955467 9024112 9050062 - 102029728 AGCD01051481;GBBH01116472;GBCQ01096262;XM_013522050;XM_013522051;XM_013522052;XM_013522053;XM_013522054;XM_013522055;XM_013522056;XM_013522057;XM_013522058;XM_013522059 XP_013377504;XP_013377505;XP_013377506;XP_013377507;XP_013377508;XP_013377509;XP_013377510;XP_013377511;XP_013377512;XP_013377513 MODEL 9033649 protein-coding Cav2 caveolin 2 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); heterotrimeric G-protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN basement membrane organization (ortholog); caveola assembly (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; syndecan signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Autoimmune Myocarditis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); caveola (ortholog); caveolar macromolecular signaling complex (ortholog) NW_004955432 22240041 22242200 + 102005623 AGCD01031251;GBDK01002096;GBDK01002097;XM_005388157 XP_005388214 MODEL 39133813 misc_rna 7SK 7SK RNA 9036761 protein-coding Impdh2 inosine monophosphate dehydrogenase 2 ENCODES a protein that exhibits identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); nucleotide binding (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); cellular response to interleukin-4 (ortholog); circadian rhythm (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; mycophenolic acid pharmacokinetics pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955532 1047138 1051980 - 102006279 AGCD01070164;GBDI01080320;XM_005410178;XM_013507582 XP_005410235;XP_013363036 MODEL 8733591 pseudo LOC102010496 normal mucosa of esophagus-specific gene 1 protein pseudogene NW_004955421 23376672 23380513 - 102010496 AGCD01022183 MODEL 8712953 protein-coding Lipn lipase family member N ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive congenital ichthyosis 8 (ortholog); Breast Cancer, Familial (ortholog) NW_004955425 4187537 4205066 - 102020818 AGCD01025310;GBDK01267087;XM_005385863;XM_013514915 XP_005385920;XP_013370369 MODEL 9048480 protein-coding LOC102005656 retinol dehydrogenase 7-like NW_004955641 46039 49565 - 102005656 AGCD01077703;AGCD01077704;XM_005415046 XP_005415103 MODEL 8912073 protein-coding Disp2 dispatched RND transporter family member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog) NW_004955416 7282048 7297896 + 102019166 AGCD01016971;GBDF01021438;XM_005381233 XP_005381290 MODEL 8751217 protein-coding Colec11 collectin subfamily member 11 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent carbohydrate binding (ortholog); D-mannose binding (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); complement activation (ortholog); complement activation, lectin pathway (ortholog); ASSOCIATED WITH 3MC syndrome (ortholog); 3MC syndrome 1 (ortholog); 3MC syndrome 2 (ortholog); FOUND IN extracellular region (ortholog) NW_004955487 3778901 3789852 - 102017991 AGCD01059293;AGCD01059294;GBDK01061498;XM_005404374;XM_013504346 XP_005404431;XP_013359800 MODEL 9040942 ncrna LOC102006752 uncharacterized LOC102006752 NW_004955410 28863475 28865857 + 102006752 AGCD01011262;GBCB01001006;XR_259878 MODEL 8866344 protein-coding Aqp2 aquaporin 2 ENCODES a protein that exhibits actin binding (ortholog); glycerol transmembrane transporter activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); cell volume homeostasis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH cardiomyopathy (ortholog); diabetes insipidus (ortholog); diabetic ketoacidosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); clathrin-coated vesicle (ortholog) NW_004955547 547770 555764 + 102009548 AGCD01072162;GBCQ01008561;XM_005411855;XM_005411856;XM_013508504;XM_013508505 XP_005411912;XP_005411913;XP_013363958;XP_013363959 MODEL 8719141 protein-coding LOC102009339 netrin receptor UNC5D-like NW_004955775 2794 4739 - 102009339 AGCD01078325;GBBH01098166;XM_005415109 XP_005415166 MODEL 8900877 protein-coding Ect2l epithelial cell transforming 2 like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog) NW_004955436 20754395 20843015 - 102015238 AGCD01034038;AGCD01034039;AGCD01034040;AGCD01034041;GBDF01223049;XM_013516618;XM_013516619;XM_013516620;XM_013516621;XM_013516622;XM_013516623;XM_013516624;XM_013516625;XM_013516626;XM_013516627;XM_013516629;XR_001234967 XP_013372072;XP_013372073;XP_013372074;XP_013372075;XP_013372076;XP_013372077;XP_013372078;XP_013372079;XP_013372080;XP_013372081;XP_013372083 MODEL 8720329 protein-coding Grik1 glutamate ionotropic receptor kainate type subunit 1 ENCODES a protein that exhibits extracellularly glutamate-gated ion channel activity (ortholog); glutamate binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN adult behavior (ortholog); behavioral response to pain (ortholog); excitatory postsynaptic potential (ortholog); PARTICIPATES IN long term potentiation; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); ionotropic glutamate receptor complex (ortholog) NW_004955407 28899643 29308936 - 102027813 AGCD01007596;AGCD01007597;AGCD01007598;AGCD01007599;AGCD01007600;AGCD01007601;AGCD01007602;AGCD01007603;AGCD01007604;AGCD01007605;AGCD01007606;XM_005375621;XM_005375622 XP_005375678;XP_005375679 MODEL 8721763 protein-coding LOC102008589 protein FAM170A-like NW_004955644 8842 16020 + 102008589 AGCD01077727;GBDF01075273;XM_005415048;XM_005415049 XP_005415105;XP_005415106 MODEL 8960031 protein-coding Anks1b ankyrin repeat and sterile alpha motif domain containing 1B ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); postsynapse to nucleus signaling pathway (ortholog); receptor localization to synapse (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); nucleoplasm (ortholog) NW_004955405 34701613 35776076 - 102016229 AGCD01005382;AGCD01005383;AGCD01005384;AGCD01005385;AGCD01005386;AGCD01005387;AGCD01005388;AGCD01005389;AGCD01005390;AGCD01005391;AGCD01005392;AGCD01005393;AGCD01005394;AGCD01005395;AGCD01005396;AGCD01005397;AGCD01005398;AGCD01005399;AGCD01005400;GBDF01207486;GBDJ01338802;XM_005374511;XM_013518589 XP_005374568;XP_013374043 MODEL 8804190 pseudo LOC102012875 uncharacterized LOC102012875 NW_004955497 3366221 3391937 + 102012875 AGCD01062536;AGCD01062537;AGCD01062538;AGCD01062539 MODEL 8797466 protein-coding Igf2 insulin like growth factor 2 ENCODES a protein that exhibits growth factor activity (ortholog); insulin receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); cellular response to mechanical stimulus (ortholog); embryonic placenta development (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); adrenocortical carcinoma (ortholog); alcohol use disorder (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 13880525 13907963 - 102005482 AGCD01022840;AGCD01022841;GBDK01090861;XM_005384193;XM_013514303;XM_013514304;XM_013514305 XP_005384250;XP_013369757;XP_013369758;XP_013369759 MODEL 10368584 protein-coding Cep295nl CEP295 N-terminal like FOUND IN motile cilium (ortholog) NW_004955506 3780240 3791540 + 106146241 AGCD01065319;GBDF01044585;XM_005407354;XM_005407356;XM_013506100;XM_013506101;XM_013506102;XM_013506103;XM_013506104;XM_013506105;XM_013506106;XM_013506107;XM_013506108;XM_013506109 XP_005407411;XP_005407413;XP_013361554;XP_013361555;XP_013361556;XP_013361557;XP_013361558;XP_013361559;XP_013361560;XP_013361561;XP_013361562;XP_013361563 MODEL 39134209 misc_rna 7SK 7SK RNA 8984968 protein-coding Aars2 alanyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits alanine-tRNA ligase activity (ortholog); peptide lactyltransferase (ATP-dependent) activity (ortholog); INVOLVED IN mitochondrial alanyl-tRNA aminoacylation (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); PARTICIPATES IN alanine metabolic pathway; lactic acidosis pathway; primary hyperoxaluria type 1 pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); apraxia (ortholog); autistic disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955437 9915371 9924886 - 102022744 AGCD01034549;GBDI01179754;XM_005389818;XM_013516840 XP_005389875;XP_013372294 MODEL 9034222 protein-coding Esr1 estrogen receptor 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); antral ovarian follicle growth (ortholog); baculum development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; follicle-stimulating hormone signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955439 9588631 9953606 - 102028019 AGCD01035840;AGCD01035841;AGCD01035842;AGCD01035843;AGCD01035844;AGCD01035845;AGCD01035846;GBCB01061195;XM_005390573;XM_005390574;XM_013517315 XP_005390630;XP_005390631;XP_013372769 MODEL 8949623 protein-coding Cd244 CD244 molecule ENCODES a protein that exhibits MHC class I protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN myeloid dendritic cell activation (ortholog); natural killer cell activation (ortholog); natural killer cell activation involved in immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); membrane raft (ortholog) NW_004955468 12532937 12559859 - 102021229 AGCD01052157;AGCD01052158;GBDK01279525;XM_005400218;XM_005400219;XM_013522491;XM_013522492;XR_001236927 XP_005400275;XP_005400276;XP_013377945;XP_013377946 MODEL 8718430 protein-coding Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); apyrase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN ADP catabolic process (ortholog); cellular response to aluminum ion (ortholog); cellular response to interferon-alpha (ortholog); ASSOCIATED WITH demyelinating disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN basement membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955507 2035918 2141327 + 102010183 AGCD01065577;AGCD01065578;AGCD01065579;AGCD01065580;GBDF01127217;XM_005407549;XM_005407551;XM_005407553;XM_013506151;XM_013506153 XP_005407606;XP_005407608;XP_005407610;XP_013361605;XP_013361607 MODEL 8892606 protein-coding Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN epidermis development (ortholog); phosphatidic acid biosynthetic process (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH cervical cancer (ortholog); congenital generalized lipodystrophy (ortholog); congenital generalized lipodystrophy type 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955513 4142074 4145097 + 102025828 AGCD01066922;GBDF01003324;GBDK01007887;XM_013506701 XP_013362155 MODEL 8755734 protein-coding Bud13 BUD13 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Achalasia-Progeroid Syndrome (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955412 18095069 18113386 - 102020228 AGCD01012924;AGCD01012925;AGCD01012926;GBDF01156360;XM_013511204;XM_013511205 XP_013366658;XP_013366659 MODEL 39133949 misc_rna 7SK 7SK RNA 8891143 pseudo LOC102008226 voltage-dependent anion-selective channel protein 1-like NW_004955419 25137127 25158946 + 102008226 AGCD01020373;AGCD01020374 MODEL 9010515 protein-coding Fcrl5 Fc receptor like 5 ENCODES a protein that exhibits coreceptor activity (ortholog); INVOLVED IN B cell activation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of release of sequestered calcium ion into cytosol (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955468 9434654 9464907 - 102016579 AGCD01052047;GBBH01226026;XM_005400121;XM_005400122;XM_005400123 XP_005400178;XP_005400179;XP_005400180 MODEL 8774071 protein-coding Cdk1 cyclin dependent kinase 1 ENCODES a protein that exhibits chromatin binding (ortholog); cyclin binding (ortholog); cyclin-dependent protein kinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to hydrogen peroxide (ortholog); chromosome condensation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); cyclin A2-CDK1 complex (ortholog); cyclin B1-CDK1 complex (ortholog) NW_004955425 14210681 14226474 + 102016492 AGCD01025555;GBDF01082645;XM_013514913 XP_013370367 MODEL 8760855 protein-coding Gfod2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955484 8963297 9009791 + 102024571 AGCD01058401;AGCD01058402;AGCD01058403;GBDF01080362;XM_005403626;XM_013503954 XP_005403683;XP_013359408 MODEL 8945726 protein-coding Adarb1 adenosine deaminase RNA specific B1 ENCODES a protein that exhibits adenosine deaminase activity (ortholog); double-stranded RNA adenosine deaminase activity (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN adenosine to inosine editing (ortholog); base conversion or substitution editing (ortholog); facial nerve morphogenesis (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); brain disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 41886286 41962846 + 102011737 AGCD01007884;GBCE01116963;GBDK01358973;XM_005375908 XP_005375965 MODEL 8744167 protein-coding Kcnq2 potassium voltage-gated channel subfamily Q member 2 ENCODES a protein that exhibits ankyrin binding (ortholog); calmodulin binding (ortholog); potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); action potential initiation (ortholog); apoptosome assembly (ortholog); ASSOCIATED WITH amblyopia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN axon initial segment (ortholog); cell surface (ortholog); node of Ranvier (ortholog) NW_004955528 737416 792885 + 102011038 AGCD01069546;GBCE01016863;XM_005409965;XM_005409966;XM_005409967;XM_005409968;XM_005409969;XM_005409970;XM_005409971;XM_005409972;XM_005409973;XM_005409974;XM_013507499 XP_005410022;XP_005410023;XP_005410024;XP_005410025;XP_005410026;XP_005410027;XP_005410028;XP_005410029;XP_005410030;XP_005410031;XP_013362953 MODEL 8748420 protein-coding Eif4a3 eukaryotic translation initiation factor 4A3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); mRNA binding (ortholog); INVOLVED IN associative learning (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to selenite ion (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955506 2749534 2760873 + 102021264 AGCD01065301;GBDF01005806;XM_005407330 XP_005407387 MODEL 8854546 protein-coding Cit citron rho-interacting serine/threonine kinase ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN dendrite development (ortholog); G2/M transition of mitotic cell cycle (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autosomal recessive primary microcephaly (ortholog); FOUND IN actin cytoskeleton (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955455 11705015 11871762 + 102015283 AGCD01046018;AGCD01046019;AGCD01046020;AGCD01046021;GBDF01248560;XM_005396520;XM_005396521;XM_005396522;XM_005396523;XM_013520469;XM_013520470;XM_013520471 XP_005396577;XP_005396578;XP_005396579;XP_005396580;XP_013375923;XP_013375924;XP_013375925 MODEL 10061771 protein-coding Jmjd7 jumonji domain containing 7 ENCODES a protein that exhibits aminopeptidase activity (ortholog); endopeptidase activity (ortholog); monooxygenase activity (ortholog); INVOLVED IN protein hydroxylation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955416 8626931 8635337 + 106146239 AGCD01017064;GBBH01082721;XM_005381318;XM_005381319;XM_013512525 XP_005381375;XP_005381376;XP_013367979 MODEL 8877567 protein-coding Ccdc8 coiled-coil domain containing 8 subunit of 3M complex INVOLVED IN microtubule cytoskeleton organization (ortholog); regulation of mitotic nuclear division (ortholog); ASSOCIATED WITH genetic disease (ortholog); Three M Syndrome 3 (ortholog); FOUND IN 3M complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955574 551582 553829 - 102027024 AGCD01075110;GBBH01197963;XM_005413833 XP_005413890 MODEL 9060353 protein-coding Acin1 apoptotic chromatin condensation inducer 1 INVOLVED IN apoptotic chromosome condensation (ortholog); erythrocyte differentiation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ASAP complex (ortholog); exon-exon junction complex (ortholog); nuclear speck (ortholog) NW_004955409 37206675 37246851 + 102024313 AGCD01010498;AGCD01010499;GBDI01000873;GBDK01005483;XM_005377090 XP_005377147 MODEL 39132153 rrna 5S_rRNA 5S ribosomal RNA 8854923 protein-coding Alox12b arachidonate 12-lipoxygenase, 12R type ENCODES a protein that exhibits arachidonate 12(R)-lipoxygenase activity (ortholog); arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 8(R)-lipoxygenase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); bicellular tight junction assembly (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH adenocarcinoma (ortholog); autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955467 8876186 8887980 + 102025448 AGCD01051477;GBDI01086683;XM_005399437 XP_005399494 MODEL 8721033 ncrna LOC102009735 uncharacterized LOC102009735 NW_004955500 4775193 4791358 - 102009735 AGCD01063811;GBDF01219713;XR_001231484;XR_001231485;XR_001231486 MODEL 39131748 rrna 5S_rRNA 5S ribosomal RNA 8881808 ncrna LOC102005660 uncharacterized LOC102005660 NW_004955404 45053525 45082173 - 102005660 AGCD01004437;XR_001234995;XR_259339 MODEL 8781707 protein-coding Atpaf2 ATP synthase mitochondrial F1 complex assembly factor 2 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Deglutition Disorders (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) NW_004955478 11249073 11264249 + 102023589 AGCD01056165;GBDJ01186302;XM_005402289 XP_005402346 MODEL 8851519 ncrna LOC102007102 uncharacterized LOC102007102 NW_004955468 7023137 7030091 + 102007102 AGCD01051993;GBDF01224168;XR_263396 MODEL 8948764 protein-coding Trmt61b tRNA methyltransferase 61B ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); rRNA (adenine) methyltransferase activity (ortholog); tRNA (adenine(58)-N1)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial tRNA processing (ortholog); mRNA processing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955469 10744814 10771560 - 102014440 AGCD01052549;GBDI01162186;XM_013522617 XP_013378071 MODEL 9006213 protein-coding Disp3 dispatched RND transporter family member 3 INVOLVED IN negative regulation of neuron differentiation (ortholog); positive regulation of lipid metabolic process (ortholog); positive regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955486 2290413 2335193 - 102010164 AGCD01058995;GBDJ01220566;XM_005404001 XP_005404058 MODEL 10193911 ncrna LOC106149959 uncharacterized LOC106149959 NW_004955458 5329029 5330856 - 106149959 AGCD01047476;GBDI01105749;XR_001236453 MODEL 9052565 ncrna LOC102006753 uncharacterized LOC102006753 NW_004955463 9484775 9495936 + 102006753 AGCD01049784;AGCD01049785;XR_263163 MODEL 39131474 protein-coding CMSS1 cms1 ribosomal small subunit homolog 8749671 protein-coding Aqp3 aquaporin 3 (Gill blood group) ENCODES a protein that exhibits glycerol channel activity (ortholog); identical protein binding (ortholog); polyol transmembrane transporter activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); glycerol transmembrane transport (ortholog); odontogenesis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH brain edema (ortholog); brain ischemia (ortholog); Esophageal Neoplasms (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955472 2234770 2239753 + 102007885 AGCD01053446;GBBH01003723;XM_005401098 XP_005401155 MODEL 9006315 pseudo LOC102012878 mitochondrial import inner membrane translocase subunit TIM14 pseudogene NW_004955426 25828943 25829298 - 102012878 AGCD01026728 MODEL 8965628 protein-coding Htr1a 5-hydroxytryptamine receptor 1A ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); behavioral fear response (ortholog); behavioral response to nicotine (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN axon hillock (ortholog); GABA-ergic synapse (ortholog); neuronal cell body (ortholog) NW_004955446 4913181 4917726 + 102023540 AGCD01040050;XM_005392639 XP_005392696 MODEL 8730539 protein-coding Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); dendrite arborization (ortholog); gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); colon adenoma (ortholog); FOUND IN axon (ortholog); CRD-mediated mRNA stability complex (ortholog); cytoplasm (ortholog) NW_004955451 12312715 12348663 - 102028366 AGCD01043385;AGCD01043386;GBDF01076205;XM_005394222;XM_005394223 XP_005394279;XP_005394280 MODEL 8935628 protein-coding Anks3 ankyrin repeat and sterile alpha motif domain containing 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Dwarfism (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog) NW_004955442 12752468 12775081 + 102006078 AGCD01037745;GBDI01217752;XM_005391276;XM_013517712;XM_013517713;XM_013517714;XM_013517715;XM_013517716;XM_013517717 XP_005391333;XP_013373166;XP_013373167;XP_013373168;XP_013373169;XP_013373170;XP_013373171 MODEL 9064735 protein-coding LOC102017774 haptoglobin NW_004955484 4738412 4742596 + 102017774 AGCD01058231;GBDJ01008430;XM_005403528 XP_005403585 MODEL 8897082 protein-coding Aasdh aminoadipate-semialdehyde dehydrogenase INVOLVED IN amino acid activation for nonribosomal peptide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955447 14623532 14648121 + 102007828 AGCD01041017;AGCD01041018;GBBH01082256;GBCB01131679;XM_013518497 XP_013373951 MODEL 9018087 protein-coding Impg1 interphotoreceptor matrix proteoglycan 1 INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN gel phase of interstitial matrix (ortholog); interphotoreceptor matrix (ortholog); photoreceptor inner segment (ortholog) NW_004955502 4359071 4502623 - 102013312 AGCD01064334;AGCD01064335;AGCD01064336;AGCD01064337;GBDF01259084;XM_013505815 XP_013361269 MODEL 8744818 protein-coding LOC102011261 vomeronasal type-1 receptor 4-like NW_004955584 575353 576579 - 102011261 AGCD01075948;XM_005414368 XP_005414425 MODEL 8966521 protein-coding Lipt1 lipoyltransferase 1 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN protein lipoylation (ortholog); ASSOCIATED WITH Leigh disease (ortholog); Lipoyltransferase 1 Deficiency (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955470 5480279 5492259 + 102009933 AGCD01052751;GBDJ01048175;XM_005400739;XM_013522813 XP_005400796;XP_013378267 MODEL 8978403 protein-coding LOC102010497 chromosome unknown open reading frame, human C16orf54 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955493 7204452 7207168 + 102010497 AGCD01061164;GBCQ01165127;XM_005405245;XM_005405246;XR_264093 XP_005405302;XP_005405303 MODEL 8943771 pseudo LOC102021863 uncharacterized LOC102021863 NW_004955465 6775792 6836185 + 102021863 AGCD01050448 MODEL 8901951 protein-coding Colec12 collectin subfamily member 12 ENCODES a protein that exhibits low-density lipoprotein particle binding (ortholog); pattern recognition receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); immune response (ortholog); phagocytosis, recognition (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog) NW_004955402 9445419 9614956 + 102017936 AGCD01000217;AGCD01000218;AGCD01000219;AGCD01000220;AGCD01000221;AGCD01000222;AGCD01000223;AGCD01000224;GBCE01101961;XM_005373148 XP_005373205 MODEL 8823825 pseudo LOC102004258 protein tyrosine phosphatase type IVA 1 pseudogene NW_004955464 8933302 8933760 - 102004258 AGCD01050099 MODEL 8901851 pseudo LOC102011694 casein kinase I NW_004955434 9624730 9625478 - 102011694 AGCD01032306;XR_261649 MODEL 8761037 protein-coding LOC102003900 CSC1-like protein 1 NW_004955520 110432 115131 + 102003900 AGCD01068006;GBBH01033679;GBCC01001992;XM_013507053 XP_013362507 MODEL 8973069 protein-coding Adarb2 adenosine deaminase RNA specific B2 (inactive) ENCODES a protein that exhibits double-stranded RNA adenosine deaminase activity (ortholog); mRNA binding (ortholog); RNA sequestering activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); negative regulation of mRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 29705289 30028013 + 102011777 AGCD01022363;AGCD01022364;AGCD01022365;AGCD01022366;AGCD01022367;AGCD01022368;AGCD01022369;AGCD01022370;AGCD01022371;AGCD01022372;AGCD01022373;AGCD01022374;AGCD01022375;AGCD01022376;AGCD01022377;XM_013513649 XP_013369103 MODEL 8916256 protein-coding Eda ectodysplasin A ENCODES a protein that exhibits cytokine activity (ortholog); death receptor agonist activity (ortholog); death receptor binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); cytokine-mediated signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH anodontia (ortholog); Breast Cancer, Familial (ortholog); Clouston syndrome (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) NW_004955475 9177911 9592150 + 102017331 AGCD01055059;AGCD01055060;AGCD01055061;AGCD01055062;AGCD01055063;AGCD01055064;AGCD01055065;AGCD01055066;AGCD01055067;AGCD01055068;GBBH01162077;XM_005401598;XM_005401599;XM_005401600;XM_005401601;XM_005401602 XP_005401655;XP_005401656;XP_005401657;XP_005401658;XP_005401659 MODEL 39134210 misc_rna 7SK 7SK RNA 8830520 protein-coding LOC102004605 histone H2A type 1 NW_004955483 970650 971254 - 102004605 AGCD01057638;GBDF01049962;XM_013503794 XP_013359248 MODEL 9064143 protein-coding Cav3 caveolin 3 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium channel regulator activity (ortholog); connexin binding (ortholog); INVOLVED IN actin filament organization (ortholog); cardiac muscle cell development (ortholog); caveola assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dystrophin-associated glycoprotein complex (ortholog) NW_004955561 326008 335911 + 102027240 AGCD01073821;GBCB01040641;XM_005412999 XP_005413056 MODEL 8974572 protein-coding Esr2 estrogen receptor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN amygdala development (ortholog); behavioral fear response (ortholog); brain development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; tamoxifen pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955466 5587003 5644765 + 102004260 AGCD01050885;GBDF01079691;XM_005399136;XM_013521918 XP_005399193;XP_013377372 MODEL 9042421 ncrna LOC102009736 uncharacterized LOC102009736 NW_004955425 27635177 27653923 + 102009736 AGCD01025978;GBDJ01039065;XR_001234273;XR_261177 MODEL 8759530 protein-coding Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) NW_004955407 41365920 41434090 - 102030154 AGCD01007865;GBCE01117797;GBDF01005441;XM_005375876 XP_005375933 MODEL 8877618 protein-coding Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); apyrase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to interferon-alpha (ortholog); cellular response to interleukin-6 (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN basement membrane (ortholog); cell body (ortholog); cell projection membrane (ortholog) NW_004955513 5070050 5075098 - 102029650 AGCD01066953;GBDI01356592;XM_005408572;XM_005408574 XP_005408629;XP_005408631 MODEL 8720735 protein-coding Ccdc80 coiled-coil domain containing 80 ENCODES a protein that exhibits fibronectin binding (ortholog); glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); response to bacterium (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colorectal cancer (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); interstitial matrix (ortholog) NW_004955427 12945230 12975020 - 102028661 AGCD01027230;GBCE01076690;XM_005386391 XP_005386448 MODEL 8895379 protein-coding Alox15 arachidonate 15-lipoxygenase ENCODES a protein that exhibits arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 15-lipoxygenase activity (ortholog); hepoxilin-epoxide hydrolase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); arachidonate metabolic process (ortholog); bone mineralization (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955467 10032792 10039789 - 102009820 AGCD01051543;GBDJ01148490;XM_005399581;XM_013522022 XP_005399638;XP_013377476 MODEL 8752660 protein-coding Bud23 BUD23 rRNA methyltransferase and ribosome maturation factor ENCODES a protein that exhibits protein heterodimerization activity (ortholog); rRNA (guanine) methyltransferase activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955456 14047409 14057483 - 102024647 AGCD01046632;GBBH01060290;XM_005396771 XP_005396828 MODEL 39133950 misc_rna 7SK 7SK RNA 8775056 protein-coding Calb2 calbindin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); regulation of synaptic plasticity (ortholog); synaptic signaling (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Endometrial Neoplasms (ortholog); FOUND IN neuronal cell body; vestibular calyx terminal; cuticular plate (ortholog) NW_004955484 4075103 4103509 + 102007998 AGCD01058202;GBDF01159941;XM_005403497 XP_005403554 MODEL 8944939 protein-coding Grik2 glutamate ionotropic receptor kainate type subunit 2 ENCODES a protein that exhibits extracellularly glutamate-gated ion channel activity (ortholog); glutamate receptor activity (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); chemical synaptic transmission (ortholog); detection of cold stimulus involved in thermoception (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 6 (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendrite cytoplasm (ortholog) NW_004955411 27096214 27759503 + 102027501 AGCD01012184;AGCD01012185;AGCD01012186;AGCD01012187;AGCD01012188;AGCD01012189;AGCD01012190;AGCD01012191;AGCD01012192;AGCD01012193;AGCD01012194;AGCD01012195;AGCD01012196;AGCD01012197;AGCD01012198;GBBH01106371;XM_005377815;XM_005377816;XM_013510935;XM_013510936 XP_005377872;XP_005377873;XP_013366389;XP_013366390 MODEL 8988857 protein-coding Atpsckmt ATP synthase c subunit lysine N-methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine trimethylation (ortholog); positive regulation of proton-transporting ATP synthase activity, rotational mechanism (ortholog); positive regulation of sensory perception of pain (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955426 116223 131798 - 102029535 AGCD01025996;GBDF01145448;XM_005386109;XM_005386111;XM_013514990 XP_005386166;XP_005386168;XP_013370444 MODEL 8860728 protein-coding LOC102008590 protocadherin gamma-B7-like NW_004957438 6 1466 - 102008590 AGCD01080834;GBCB01007960;XM_005415231 XP_005415288 MODEL 8762999 protein-coding Trmt9b tRNA methyltransferase 9B (putative) ENCODES a protein that exhibits tRNA methyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955463 4035145 4096996 - 102015816 AGCD01049600;AGCD01049601;GBDJ01298592;XM_013521538;XM_013521539;XM_013521540;XM_013521541;XM_013521542;XM_013521543;XM_013521544;XM_013521545;XM_013521546;XM_013521547;XM_013521548;XM_013521549;XM_013521550;XM_013521551;XM_013521552;XM_013521553;XM_013521554;XM_013521555;XM_013521556;XM_013521557;XM_013521558;XM_013521559 XP_013376992;XP_013376993;XP_013376994;XP_013376995;XP_013376996;XP_013376997;XP_013376998;XP_013376999;XP_013377000;XP_013377001;XP_013377002;XP_013377003;XP_013377004;XP_013377005;XP_013377006;XP_013377007;XP_013377008;XP_013377009;XP_013377010;XP_013377011;XP_013377012;XP_013377013 MODEL 8806480 protein-coding Eif4b eukaryotic translation initiation factor 4B PARTICIPATES IN mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); postsynapse (ortholog) NW_004955458 296242 325451 + 102010230 AGCD01047118;AGCD01047119;GBDF01000268;XM_005397137;XM_005397139;XM_005397140 XP_005397194;XP_005397196;XP_005397197 MODEL 8785059 protein-coding Cep350 centrosomal protein 350 INVOLVED IN non-motile cilium assembly (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955406 19178993 19329467 + 102010668 AGCD01006075;AGCD01006076;AGCD01006077;GBDF01031796;XM_013521299;XM_013521300;XM_013521303;XM_013521305;XM_013521308 XP_013376753;XP_013376754;XP_013376757;XP_013376759;XP_013376762 MODEL 8930109 protein-coding Cited1 Cbp/p300 interacting transactivator with ED-rich tail 1 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); LBD domain binding (ortholog); INVOLVED IN brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); embryonic axis specification (ortholog); ASSOCIATED WITH Kidney Reperfusion Injury (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955475 11722514 11725067 - 102013715 AGCD01055167;GBDF01263729;GBDK01278752;XM_005401687 XP_005401744 MODEL 8909240 protein-coding Cd247 CD247 molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); Fc-gamma receptor signaling pathway (ortholog); positive regulation of protein localization to cell surface (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); cytoplasm (ortholog); Fc-gamma receptor III complex (ortholog) NW_004955462 9466706 9539897 + 102025984 AGCD01049339;GBCE01129875;XM_005398233;XM_013521423 XP_005398290;XP_013376877 MODEL 8704413 protein-coding Chd4 chromodomain helicase DNA binding protein 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); double-strand break repair via homologous recombination (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN centrosome (ortholog); cerebellar granule cell to Purkinje cell synapse (ortholog); chromosome, telomeric region (ortholog) NW_004955413 4191619 4228225 - 102015302 AGCD01013601;AGCD01013602;AGCD01013603;AGCD01013604;GBDK01016911;XM_005378770;XM_013511310;XM_013511311;XM_013511312 XP_005378827;XP_013366764;XP_013366765;XP_013366766 MODEL 39133814 misc_rna 7SK 7SK RNA 8876553 ncrna LOC102012879 uncharacterized LOC102012879 NW_004955504 2373902 2394467 + 102012879 AGCD01064857;AGCD01064858;GBCB01109961;XR_001231540;XR_264288 MODEL 39132154 rrna 5S_rRNA 5S ribosomal RNA 8923833 protein-coding Ackr1 atypical chemokine receptor 1 (Duffy blood group) ENCODES a protein that exhibits C-C chemokine binding (ortholog); INVOLVED IN inflammatory response (ortholog); regulation of chemokine production (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Arteriovenous Fistula (ortholog); asthma (ortholog); FOUND IN G protein-coupled receptor complex (ortholog); plasma membrane (ortholog) NW_004955468 10994372 10997434 + 102004267 AGCD01052109;GBDF01130183;XM_005400165 XP_005400222 MODEL 39131749 rrna 5S_rRNA 5S ribosomal RNA 8756917 protein-coding LOC102017776 uncharacterized LOC102017776 NW_004955420 25040524 25045906 + 102017776 AGCD01021341;GBCQ01153372;XM_005383415 XP_005383472 MODEL 8790384 protein-coding LOC102005661 hematopoietic prostaglandin D synthase-like NW_004955405 437618 453991 + 102005661 AGCD01004560;GBDK01126143;XM_005374245;XR_001235167;XR_001235168;XR_259351 XP_005374302 MODEL 8825637 protein-coding LOC102008228 chemokine XC receptor 1-like NW_004955420 26003029 26017172 + 102008228 AGCD01021384;AGCD01021385;AGCD01021386;AGCD01021387;AGCD01021388;GBDK01289511;XM_013513345 XP_013368799 MODEL 8838914 protein-coding LOC102009342 translation initiation factor IF-2-like NW_004955404 10719070 10720405 + 102009342 AGCD01003391;GBDF01220559;XM_005374052 XP_005374109 MODEL 8861419 protein-coding Fcrl6 Fc receptor like 6 ENCODES a protein that exhibits MHC class II protein binding (ortholog); phosphatase binding (ortholog); protein phosphatase binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955468 11581225 11617268 + 102007878 AGCD01052135;AGCD01052136;GBDK01386476;XM_005400174 XP_005400231 MODEL 8970787 protein-coding LOC102010503 lariat debranching enzyme-like NW_004955501 822211 823819 + 102010503 AGCD01064040;GBDF01305393;XM_005406749 XP_005406806 MODEL 8787858 protein-coding Cdk10 cyclin dependent kinase 10 ENCODES a protein that exhibits cyclin-dependent protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); peptidyl-threonine phosphorylation (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Al Kaissi Syndrome (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN ciliary basal body (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); nucleus (ortholog) NW_004955541 3235441 3242377 + 102013543 AGCD01071440;GBBH01051607;XM_005411050;XM_005411051;XM_005411052;XM_005411054;XM_005411055;XM_005411056;XM_005411057;XM_013507947;XM_013507948;XM_013507949 XP_005411107;XP_005411108;XP_005411109;XP_005411111;XP_005411112;XP_005411113;XP_005411114;XP_013363401;XP_013363402;XP_013363403 MODEL 8989561 protein-coding Dixdc1 DIX domain containing 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in forebrain (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 13640693 13713926 + 102021643 AGCD01012843;AGCD01012844;GBDK01318184;XM_005378089;XM_005378092;XM_005378093;XM_005378094;XM_013511056;XM_013511057;XM_013511058;XM_013511059 XP_005378146;XP_005378149;XP_005378150;XP_005378151;XP_013366510;XP_013366511;XP_013366512;XP_013366513 MODEL 39133951 misc_rna 7SK 7SK RNA 8702855 pseudo LOC102004259 phosphoacetylglucosamine mutase pseudogene NW_004955465 13182009 13183562 + 102004259 AGCD01050592 MODEL 8863979 protein-coding LOC102011696 butyrophilin-like protein 8 NW_004955530 347486 352064 - 102011696 AGCD01069846;GBDF01142616;XM_013507548 XP_013363002 MODEL 8738388 protein-coding Anks4b ankyrin repeat and sterile alpha motif domain containing 4B ENCODES a protein that exhibits myosin binding (ortholog); INVOLVED IN brush border assembly (ortholog); protein localization to microvillus (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum membrane (ortholog); microvillus (ortholog) NW_004955493 429339 439456 + 102006356 AGCD01060851;GBCQ01072081;XM_005405050 XP_005405107 MODEL 39134211 misc_rna 7SK 7SK RNA 8943561 protein-coding Htr1b 5-hydroxytryptamine receptor 1B ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); bone remodeling (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); amphetamine abuse (ortholog); Anorexia (ortholog); FOUND IN calyx of Held (ortholog); cytoplasm (ortholog); G protein-coupled serotonin receptor complex (ortholog) NW_004955502 5640919 5646899 - 102003673 AGCD01064373;GBDJ01224445;XM_005406899;XR_264265 XP_005406956 MODEL 8881807 pseudo LOC102004607 phosphatidylserine synthase 1 pseudogene NW_004955419 18515166 18516459 - 102004607 AGCD01020175 MODEL 10136571 ncrna LOC106149960 uncharacterized LOC106149960 NW_004955458 5327632 5328448 - 106149960 AGCD01047476;GBDK01044031;XR_001236454;XR_001236455 MODEL 9021656 protein-coding Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase ENCODES a protein that exhibits holo-[acyl-carrier-protein] synthase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); protein maturation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955412 8723828 8747684 + 102027624 AGCD01012722;GBBH01093348;XM_005378020 XP_005378077 MODEL 9019866 pseudo LOC102009737 nucleophosmin pseudogene NW_004955503 3206385 3225585 - 102009737 AGCD01064619 MODEL 8859305 protein-coding LOC102011263 cornifin-B NW_004955592 410702 412632 - 102011263 AGCD01076312;GBCC01001188;XM_005414616 XP_005414673 MODEL 39131548 protein-coding LIPT2 lipoyl(octanoyl) transferase 2 8793608 protein-coding Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ENCODES a protein that exhibits amino acid binding (ortholog); carbohydrate binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); circadian regulation of gene expression (ortholog); D-glucosamine biosynthetic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955424 15692088 15739894 + 102025483 AGCD01024723;AGCD01024724;AGCD01024725;GBDF01267390;XM_013514590 XP_013370044 MODEL 9058926 protein-coding Alox15b arachidonate 15-lipoxygenase type B ENCODES a protein that exhibits arachidonate 15-lipoxygenase activity (ortholog); arachidonate 8(S)-lipoxygenase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); endocannabinoid signaling pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955467 8896740 8906032 - 102025779 AGCD01051477;GBDJ01402897;XM_005399438 XP_005399495 MODEL 8743504 protein-coding LOC102007103 cytochrome P450 2D17-like NW_004955413 27588186 27597795 - 102007103 AGCD01014517;GBCB01038107;XM_005379404;XM_013511460;XM_013511461 XP_005379461;XP_013366914;XP_013366915 MODEL 8845226 pseudo LOC102021865 histone-lysine N-methyltransferase SUV39H2-like NW_004955466 11408957 11433268 - 102021865 AGCD01051093 MODEL 8763580 protein-coding Bud31 BUD31 spliceosome associated protein ENCODES a protein that exhibits nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955460 15083472 15092217 + 102009584 AGCD01048768;GBDF01047466;XM_005397944;XM_005397945 XP_005398001;XP_005398002 MODEL 8926149 protein-coding LOC102008229 vomeronasal type-1 receptor 48-like NW_004955421 21911814 21912737 + 102008229 AGCD01022124;XM_005383932 XP_005383989 MODEL 8949239 pseudo LOC102003901 epidermal growth factor receptor substrate 15 pseudogene NW_004955433 95292 97670 + 102003901 AGCD01031301 MODEL 8810799 protein-coding Jmjd8 jumonji domain containing 8 INVOLVED IN cellular respiration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955442 16519394 16521106 + 102020168 AGCD01037901;GBBH01127026;XM_005391620;XM_005391621 XP_005391677;XP_005391678 MODEL 8728131 protein-coding Aqp4 aquaporin 4 ENCODES a protein that exhibits identical protein binding (ortholog); water channel activity (ortholog); INVOLVED IN carbon dioxide transport (ortholog); cell-cell adhesion (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH Alpers-Huttenlocher syndrome (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN astrocyte end-foot (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955772 1160 10709 + 102007844 AGCD01078317;GBCB01001173;GBDJ01395917;XM_005415104 XP_005415161 MODEL 8712852 protein-coding Adat1 adenosine deaminase tRNA specific 1 ENCODES a protein that exhibits RNA binding (ortholog); tRNA-specific adenosine deaminase activity (ortholog); INVOLVED IN tRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955484 1942868 1964901 + 102017878 AGCD01058073;GBDI01263685;XM_013504003;XM_013504004;XM_013504005;XM_013504006;XM_013504007;XM_013504008 XP_013359457;XP_013359458;XP_013359459;XP_013359460;XP_013359461;XP_013359462 MODEL 8720991 protein-coding Igf2bp2 insulin like growth factor 2 mRNA binding protein 2 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN cold-induced thermogenesis (ortholog); CRD-mediated mRNA stabilization (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytoskeleton (ortholog) NW_004955420 21818970 21957295 + 102009390 AGCD01021171;AGCD01021172;AGCD01021173;AGCD01021174;AGCD01021175;GBBH01160648;GBDJ01356061;XM_013513485 XP_013368939 MODEL 8749846 protein-coding Cavin1 caveolae associated protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); rRNA primary transcript binding (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); protein secretion (ortholog); rRNA transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH congenital generalized lipodystrophy (ortholog); congenital generalized lipodystrophy type 4 (ortholog); diabetes mellitus (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955451 16364915 16374523 - 102017734 AGCD01043673;GBDK01017777;XM_005394458 XP_005394515 MODEL 39131325 protein-coding IMPG1 interphotoreceptor matrix proteoglycan 1 8987674 protein-coding Eda2r ectodysplasin A2 receptor ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anodontia (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955475 6080153 6143339 - 102011535 AGCD01054950;AGCD01054951;AGCD01054952;GBDK01000096;XM_005401579;XM_013502891;XM_013502892;XM_013502894 XP_005401636;XP_013358345;XP_013358346;XP_013358348 MODEL 8909440 protein-coding LOC102004261 beta-galactosidase-1-like protein 2 NW_004955412 35259632 35292661 + 102004261 AGCD01013408;GBDI01106604;XM_005378599;XM_005378600;XM_005378601;XM_005378602;XM_013511245;XM_013511246 XP_005378656;XP_005378657;XP_005378658;XP_005378659;XP_013366699;XP_013366700 MODEL 39133815 misc_rna 7SK 7SK RNA 8783600 protein-coding Chd5 chromodomain helicase DNA binding protein 5 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cerebral cortex neuron differentiation (ortholog); chromatin remodeling (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); anxiety disorder (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); heterochromatin (ortholog) NW_004955486 6320380 6369020 + 102014675 AGCD01059118;AGCD01059119;GBDJ01304435;XM_005404102;XM_005404103;XM_005404104;XM_005404105 XP_005404159;XP_005404160;XP_005404161;XP_005404162 MODEL 8828043 protein-coding Agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN phospholipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955439 20050619 20132893 + 102009991 AGCD01036103;AGCD01036104;AGCD01036105;AGCD01036106;GBCQ01063027;GBDK01230032;XM_013517398 XP_013372852 MODEL 39131750 rrna 5S_rRNA 5S ribosomal RNA 8994030 protein-coding Kcnq3 potassium voltage-gated channel subfamily Q member 3 ENCODES a protein that exhibits calmodulin binding (ortholog); potassium channel activity (ortholog); protein kinase binding (ortholog); INVOLVED IN action potential initiation (ortholog); apoptosome assembly (ortholog); cellular response to ammonium ion (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); autism spectrum disorder (ortholog); FOUND IN axon initial segment (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955461 6793877 7119859 - 102012170 AGCD01048911;AGCD01048912;AGCD01048913;AGCD01048914;AGCD01048915;AGCD01048916;GBDK01419877;XM_005398013 XP_005398070 MODEL 8949714 protein-coding Esrp1 epithelial splicing regulatory protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 109 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 10813831 10881238 + 102027070 AGCD01018096;AGCD01018097;AGCD01018098;AGCD01018099;AGCD01018100;AGCD01018101;AGCD01018102;AGCD01018103;AGCD01018104;AGCD01018105;GBCE01186588;GBDI01133147;XM_005381812;XM_005381813;XM_005381816;XM_005381817 XP_005381869;XP_005381870;XP_005381873;XP_005381874 MODEL 8794446 protein-coding Colgalt1 collagen beta(1-O)galactosyltransferase 1 ENCODES a protein that exhibits procollagen galactosyltransferase activity (ortholog); INVOLVED IN positive regulation of collagen fibril organization (ortholog); protein O-linked glycosylation via galactose (ortholog); ASSOCIATED WITH brain small vessel disease 3 (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955524 773997 782911 - 102025503 AGCD01068705;AGCD01068706;GBDF01128027;GBDI01019605;XM_013507236 XP_013362690 MODEL 8886301 ncrna LOC102005663 uncharacterized LOC102005663 NW_004955405 42749975 42752628 - 102005663 AGCD01005586;GBDF01179322;XR_259461 MODEL 9024008 pseudo LOC102009346 ribosome biogenesis protein BRX1 homolog pseudogene NW_004955453 6480308 6481349 + 102009346 AGCD01044720 MODEL 8898669 protein-coding Calcb calcitonin related polypeptide beta ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN calcitonin gene-related peptide receptor signaling pathway (ortholog); ASSOCIATED WITH migraine (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 30126637 30131214 + 102026100 AGCD01015727;GBDF01041171;XM_005380339;XM_013511759 XP_005380396;XP_013367213 MODEL 9023519 protein-coding LOC102010505 olfactory receptor 5A1 NW_004955511 3947526 3953543 + 102010505 AGCD01066484;XM_005408061 XP_005408118 MODEL 8872707 protein-coding Fcrla Fc receptor like A ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955462 14604985 14611935 - 102017551 AGCD01049451;GBDK01219059;XM_005398290;XM_005398291;XM_013521426;XM_013521427;XM_013521428 XP_005398347;XP_005398348;XP_013376880;XP_013376881;XP_013376882 MODEL 8975626 protein-coding Cmss1 cms1 ribosomal small subunit homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955427 1668471 1734494 + 102020688 AGCD01026879;GBDF01085663;XM_005386295;XM_013515091;XM_013515092;XM_013515093 XP_005386352;XP_013370545;XP_013370546;XP_013370547 MODEL 8841629 protein-coding Eif4e eukaryotic translation initiation factor 4E ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); eukaryotic initiation factor 4G binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to dexamethasone stimulus (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN CRM1 export pathway; mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955405 9122960 9159095 - 102021080 AGCD01004758;GBDJ01180164;XM_005374292;XM_013517467 XP_005374349;XP_013372921 MODEL 8869875 ncrna LOC102021868 uncharacterized LOC102021868 NW_004955413 17831133 17838059 - 102021868 AGCD01014164;GBDF01081370;XR_260086 MODEL 8798770 protein-coding Cep41 centrosomal protein 41 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955479 11025320 11071256 - 102018394 AGCD01056570;AGCD01056571;GBBH01036642;XM_005402444;XM_013503299;XM_013503300;XM_013503301 XP_005402501;XP_013358753;XP_013358754;XP_013358755 MODEL 9011113 protein-coding LOC102012883 putative olfactory receptor 5AK3 NW_004955511 2055889 2056836 + 102012883 AGCD01066387;XM_005407982 XP_005408039 MODEL 8843769 protein-coding Anks6 ankyrin repeat and sterile alpha motif domain containing 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); heart development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); Cardiovascular Abnormalities (ortholog); cervical cancer (ortholog); FOUND IN ciliary inversin compartment (ortholog); cytoplasm (ortholog) NW_004955419 26801924 26852116 + 102009506 AGCD01020416;AGCD01020417;GBCE01013135;GBDI01117462;XM_013513227 XP_013368681 MODEL 8786420 protein-coding Entpd3 ectonucleoside triphosphate diphosphohydrolase 3 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); apyrase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN nucleoside diphosphate catabolic process (ortholog); nucleoside triphosphate catabolic process (ortholog); ribonucleoside diphosphate catabolic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 29445252 29471024 - 102012656 AGCD01021502;AGCD01021503;AGCD01021504;GBCQ01152313;GBDF01160505;XM_005383579 XP_005383636 MODEL 8896503 protein-coding Htr1d 5-hydroxytryptamine receptor 1D ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); serotonin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); intestine smooth muscle contraction (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Hypotension (ortholog); obsessive-compulsive disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); neuronal dense core vesicle (ortholog); plasma membrane (ortholog) NW_004955452 3207950 3228867 - 102012395 AGCD01043914;AGCD01043915;AGCD01043916;XM_005394751 XP_005394808 MODEL 8952308 protein-coding Ackr2 atypical chemokine receptor 2 ENCODES a protein that exhibits C-C chemokine binding (ortholog); C-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955420 27990786 28020203 - 102019920 AGCD01021466;AGCD01021467;GBCQ01038701;XM_005383509;XM_005383510;XM_005383513;XM_005383517;XM_005383518;XM_005383520;XM_005383521;XM_005383522;XM_005383523;XM_005383524;XM_005383525;XM_005383526;XM_005383527;XM_013513597;XM_013513598;XM_013513599;XM_013513600;XM_013513601;XM_013513602 XP_005383566;XP_005383567;XP_005383570;XP_005383574;XP_005383575;XP_005383577;XP_005383578;XP_005383579;XP_005383580;XP_005383581;XP_005383582;XP_005383583;XP_005383584;XP_013369051;XP_013369052;XP_013369053;XP_013369054;XP_013369055;XP_013369056 MODEL 8701590 protein-coding LOC102006758 olfactory receptor 147-like NW_004955412 25230240 25240655 + 102006758 AGCD01013141;XM_005378417;XM_013510987 XP_005378474;XP_013366441 MODEL 8948633 protein-coding Grik3 glutamate ionotropic receptor kainate type subunit 3 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); glutamate receptor activity (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN G protein-coupled glutamate receptor signaling pathway (ortholog); glutamate receptor signaling pathway (ortholog); negative regulation of synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); cochlear hair cell ribbon synapse (ortholog); dendrite (ortholog) NW_004955452 14719072 14933613 - 102009247 AGCD01044476;AGCD01044477;AGCD01044478;GBBH01052636;XM_005395204;XR_001236122 XP_005395261 MODEL 9048669 protein-coding Alox5 arachidonate 5-lipoxygenase ENCODES a protein that exhibits arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 5-lipoxygenase activity (ortholog); arachidonate 8(S)-lipoxygenase activity (ortholog); INVOLVED IN dendritic cell migration (ortholog); glucose homeostasis (ortholog); humoral immune response (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955546 2495226 2550909 + 102016101 AGCD01072095;AGCD01072096;AGCD01072097;GBDK01320072;XM_005411792;XM_005411793 XP_005411849;XP_005411850 MODEL 8827259 protein-coding Atr ATR serine/threonine kinase ENCODES a protein that exhibits histone H2AXS139 kinase activity (ortholog); MutLalpha complex binding (ortholog); MutSalpha complex binding (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to UV (ortholog); chromosome organization (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN ATR-ATRIP complex (ortholog); chromosome (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955508 3337036 3440313 + 102013741 AGCD01065808;AGCD01065809;AGCD01065810;AGCD01065811;GBBH01077775;XM_005407741;XM_013506249 XP_005407798;XP_013361703 MODEL 8742760 protein-coding Dkc1 dyskerin pseudouridine synthase 1 ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); pseudouridine synthase activity (ortholog); RNA binding (ortholog); INVOLVED IN box H/ACA sno(s)RNA metabolic process (ortholog); enzyme-directed rRNA pseudouridine synthesis (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH anemia (ortholog); aplastic anemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); Cajal body (ortholog) NW_004955594 846997 857255 - 102006409 AGCD01076444;AGCD01076445;GBCE01187676;GBDJ01233070;XM_013509993 XP_013365447 MODEL 8881152 protein-coding LOC102008593 cholesterol 7-alpha-monooxygenase ENCODES a protein that exhibits 24S-hydroxycholesterol 7-alpha-hydroxylase activity (ortholog); cholesterol 7-alpha-monooxygenase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); cellular response to cholesterol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); autism spectrum disorder (ortholog); cholestasis (ortholog) NW_004955454 17035105 17078854 - 102008593 AGCD01045541;AGCD01045542;AGCD01045543;AGCD01045544;GBBH01001699;GBCQ01008759;XM_013520108 XP_013375562 MODEL 9022207 protein-coding Bysl bystin like INVOLVED IN blastocyst formation (ortholog); cell population proliferation (ortholog); cellular response to forskolin (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Brain Injuries (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); chromosome (ortholog) NW_004955437 8257081 8266627 + 102019200 AGCD01034483;GBDF01090288;XM_005389708 XP_005389765 MODEL 8945015 protein-coding LOC102003903 ADP-ribosylation factor-like protein 4A NW_004955436 16294434 16295575 - 102003903 AGCD01033912;GBDF01008117;XM_005389238 XP_005389295 MODEL 8764438 protein-coding Cd248 CD248 molecule ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN anatomical structure regression (ortholog); cell migration (ortholog); lymph node development (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 19006618 19009532 + 102013307 AGCD01022970;GBCE01145879;XM_013514158 XP_013369612 MODEL 8825671 protein-coding Aqp5 aquaporin 5 ENCODES a protein that exhibits identical protein binding (ortholog); water channel activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); carbon dioxide transport (ortholog); cellular hypotonic response (ortholog); PARTICIPATES IN E-cadherin signaling pathway; water transport pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Bothnian type palmoplantar keratoderma (ortholog); brain ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955547 558296 562455 + 102010096 AGCD01072162;AGCD01072163;GBBH01004211;XM_005411857 XP_005411914 MODEL 8795757 pseudo LOC102017778 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955421 538591 539793 - 102017778 AGCD01021566 MODEL 8700916 ncrna LOC102004612 uncharacterized LOC102004612 NW_004955422 13845624 13851380 - 102004612 AGCD01022839;GBCE01145779;XR_001233893;XR_260876 MODEL 9003855 ncrna LOC102009738 uncharacterized LOC102009738 NW_004955504 990784 1006063 + 102009738 AGCD01064834;GBDI01386594;XR_001231555;XR_001231556;XR_001231557;XR_001231558;XR_001231559;XR_001231560;XR_001231561;XR_001231562;XR_001231563;XR_001231564;XR_001231565;XR_001231566;XR_001231567;XR_001231568;XR_264274;XR_264276 MODEL 8877149 pseudo LOC102011265 E3 ubiquitin-protein ligase RNF13 pseudogene NW_004955450 12920957 12924698 - 102011265 AGCD01042721 MODEL 8991159 protein-coding Ankub1 ankyrin repeat and ubiquitin domain containing 1 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955448 986177 1008175 - 102021817 AGCD01041246;GBDI01354197;XM_005393004;XM_013518681 XP_005393061;XP_013374135 MODEL 8750039 protein-coding Gfpt2 glutamine-fructose-6-phosphate transaminase 2 ENCODES a protein that exhibits L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); fructose 6-phosphate metabolic process (ortholog); UDP-N-acetylglucosamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Diabetic Nephropathies (ortholog) NW_004955408 330112 372413 + 102027271 AGCD01007915;AGCD01007916;AGCD01007917;GBDF01113230;XM_005376003 XP_005376060 MODEL 8912687 ncrna LOC102007107 uncharacterized LOC102007107 NW_004955414 22942884 22992663 + 102007107 AGCD01015486;GBDF01051420;XR_260189 MODEL 8743853 protein-coding Chd6 chromodomain helicase DNA binding protein 6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); transcription coregulator binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH adult spinal cord ependymoma (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955445 15360074 15576410 + 102028808 AGCD01039843;AGCD01039844;AGCD01039845;AGCD01039846;AGCD01039847;GBDF01040678;XM_005392507;XM_005392508;XM_005392509;XM_013518270;XM_013518271;XM_013518272;XM_013518273;XM_013518274 XP_005392564;XP_005392565;XP_005392566;XP_013373724;XP_013373725;XP_013373726;XP_013373727;XP_013373728 MODEL 8965290 protein-coding Cited2 Cbp/p300 interacting transactivator with ED-rich tail 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone acetyltransferase binding (ortholog); LBD domain binding (ortholog); INVOLVED IN adrenal cortex formation (ortholog); adrenal gland development (ortholog); blood vessel development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); atrial heart septal defect 8 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955436 20370950 20372677 + 102012124 AGCD01034022;GBDJ01003478;XM_005389258 XP_005389315 MODEL 8900039 pseudo LOC102011704 CCA tRNA nucleotidyltransferase 1, mitochondrial-like NW_004955444 8744286 8760868 + 102011704 AGCD01038945 MODEL 9036877 pseudo LOC102008236 tubulin alpha-1C chain-like NW_004955495 3000619 3002493 - 102008236 AGCD01061814 MODEL 8850257 protein-coding Calcoco1 calcium binding and coiled-coil domain 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN nuclear receptor-mediated steroid hormone signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955458 994511 1009430 - 102024978 AGCD01047160;GBBH01091176;XM_005397193;XM_005397194 XP_005397250;XP_005397251 MODEL 8932363 protein-coding Ccdc81 coiled-coil domain containing 81 ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) NW_004955414 6567722 6623043 - 102012306 AGCD01014921;AGCD01014922;AGCD01014923;AGCD01014924;GBBH01193590;GBDI01027155;XM_013511796 XP_013367250 MODEL 8849424 protein-coding Jmy junction mediating and regulatory protein, p53 cofactor ENCODES a protein that exhibits microtubule binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN 'de novo' actin filament nucleation (ortholog); actin polymerization-dependent cell motility (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN autophagosome membrane (ortholog); cell leading edge (ortholog); cytoplasmic vesicle (ortholog) NW_004955425 21800113 21902889 - 102024360 AGCD01025803;AGCD01025804;AGCD01025805;GBBH01052172;GBDJ01134939;XM_013514877 XP_013370331 MODEL 39131536 protein-coding DKK1 dickkopf WNT signaling pathway inhibitor 1 8765574 protein-coding Adat2 adenosine deaminase tRNA specific 2 ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955436 16956211 16978070 + 102008886 AGCD01033938;GBDF01178538;XM_005389250;XM_013516646;XR_001234969 XP_005389307;XP_013372100 MODEL 8809888 protein-coding Igf2bp3 insulin like growth factor 2 mRNA binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955410 25605323 25734845 - 102014023 AGCD01011162;AGCD01011163;AGCD01011164;AGCD01011165;AGCD01011166;AGCD01011167;AGCD01011168;AGCD01011169;AGCD01011170;AGCD01011171;GBCE01008969;XM_005377396;XM_013510584;XM_013510585 XP_005377453;XP_013366038;XP_013366039 MODEL 8878470 ncrna LOC102004265 uncharacterized LOC102004265 NW_004955413 25404187 25406406 - 102004265 AGCD01014405;GBDK01344235;XR_260113 MODEL 9033490 protein-coding Impg2 interphotoreceptor matrix proteoglycan 2 ENCODES a protein that exhibits heparin binding (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); intracellular protein localization (ortholog); retina morphogenesis in camera-type eye (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN gel phase of interstitial matrix (ortholog); interphotoreceptor matrix (ortholog); signaling receptor complex (ortholog) NW_004955427 2825940 2919282 - 102027552 AGCD01026905;AGCD01026906;AGCD01026907;GBDI01097241;XM_013515197 XP_013370651 MODEL 8811959 protein-coding Edar ectodysplasin A receptor ENCODES a protein that exhibits signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia (ortholog); ectodermal dysplasia 10A (ortholog); FOUND IN apical part of cell (ortholog); plasma membrane (ortholog) NW_004955470 12310680 12362555 - 102011109 AGCD01052926;AGCD01052927;GBDI01338416;XM_005400813 XP_005400870 MODEL 8715372 protein-coding Aass aminoadipate-semialdehyde synthase ENCODES a protein that exhibits saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity (ortholog); saccharopine dehydrogenase (NADP+, L-lysine-forming) activity (ortholog); INVOLVED IN L-lysine catabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955479 3746003 3805835 - 102008622 AGCD01056301;AGCD01056302;AGCD01056303;GBDJ01423946;GBDK01279764;XM_013503294 XP_013358748 MODEL 39133816 misc_rna 7SK 7SK RNA 39131751 rrna 5S_rRNA 5S ribosomal RNA 8819921 protein-coding Agpat5 1-acylglycerol-3-phosphate O-acyltransferase 5 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acylglycerol metabolic process (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog); nuclear envelope (ortholog) NW_004955403 54005001 54052363 - 102023319 AGCD01003083;AGCD01003084;GBBH01005916;GBCQ01126069;XM_013514614 XP_013370068 MODEL 9053466 protein-coding Trmu tRNA mitochondrial 2-thiouridylase ENCODES a protein that exhibits tRNA-5-taurinomethyluridine 2-sulfurtransferase activity (ortholog); ASSOCIATED WITH aminoglycoside-induced deafness (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 30440014 30453860 + 102012183 AGCD01014608;GBDF01131064;XM_005379512;XM_013511394;XM_013511395;XM_013511396 XP_005379569;XP_013366848;XP_013366849;XP_013366850 MODEL 8832403 protein-coding Cdk11b cyclin dependent kinase 11B ENCODES a protein that exhibits ATP binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN blastocyst development (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); negative regulation of apoptotic signaling pathway (ortholog); ASSOCIATED WITH Brachymorphism-Onychodysplasia-Dysphalangism Syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); cyclin L-CDK11 complex (ortholog) NW_004955486 9251242 9270218 + 102015320 AGCD01059168;AGCD01059169;AGCD01059170;AGCD01059171;GBDJ01006318;XM_005404200 XP_005404257 MODEL 9018888 protein-coding Kcnq4 potassium voltage-gated channel subfamily Q member 4 ENCODES a protein that exhibits potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN inner ear morphogenesis (ortholog); negative regulation of synaptic transmission, dopaminergic (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness 2A (ortholog); cervical cancer (ortholog); FOUND IN basal plasma membrane (ortholog) NW_004955537 624217 671407 + 102015765 AGCD01070870;GBCB01057553;GBCB01057557;XM_005410715 XP_005410772 MODEL 39133952 misc_rna 7SK 7SK RNA 8829884 protein-coding Esrp2 epithelial splicing regulatory protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); cleft lip (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8426453 8433902 + 102012434 AGCD01058383;GBCQ01177080;XM_005403591 XP_005403648 MODEL 8840509 protein-coding Colgalt2 collagen beta(1-O)galactosyltransferase 2 INVOLVED IN cell population proliferation (ortholog); gene expression (ortholog); T cell apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 22674692 22775079 - 102029263 AGCD01006160;AGCD01006161;GBCE01181738;XM_005375048;XM_005375049 XP_005375105;XP_005375106 MODEL 8753417 protein-coding LOC102009347 translation initiation factor IF-2-like NW_004955406 23881198 23887173 - 102009347 AGCD01006186;GBCQ01162563;XM_005375074;XM_013521722 XP_005375131;XP_013377176 MODEL 8721093 ncrna LOC102010512 uncharacterized LOC102010512 NW_004955432 10654891 10664188 - 102010512 AGCD01030936;GBCE01078510;XR_001234668;XR_261522 MODEL 39134212 misc_rna 7SK 7SK RNA 8861739 protein-coding Alox5ap arachidonate 5-lipoxygenase activating protein ENCODES a protein that exhibits arachidonate 5-lipoxygenase activity (ortholog); arachidonate binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); leukotriene biosynthetic process (ortholog); leukotriene production involved in inflammatory response (ortholog); PARTICIPATES IN leukotriene metabolic pathway; lipoxygenase mediated pathway of arachidonic acid metabolism; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955431 15071535 15097496 - 102019834 AGCD01030345;GBDI01216308;XM_005387741;XM_013515900 XP_005387798;XP_013371354 MODEL 39132157 rrna 5S_rRNA 5S ribosomal RNA 8741563 protein-coding Grik4 glutamate ionotropic receptor kainate type subunit 4 ENCODES a protein that exhibits glutamate-gated receptor activity (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955412 21563879 21932292 + 102012940 AGCD01013025;AGCD01013026;AGCD01013027;GBBH01131616;XM_005378354;XM_005378355;XM_013511258;XM_013511259;XM_013511260 XP_005378411;XP_005378412;XP_013366712;XP_013366713;XP_013366714 MODEL 8735813 protein-coding Fcrlb Fc receptor like B INVOLVED IN negative regulation of immune response (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955462 14591367 14597183 - 102017206 AGCD01049451;GBCE01092482;XM_005398288 XP_005398345 MODEL 8944731 protein-coding Eif4e1b eukaryotic translation initiation factor 4E family member 1B ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955408 28910141 28913692 + 102015926 AGCD01008734;GBDI01053386;XM_005376396;XM_013509642 XP_005376453;XP_013365096 MODEL 10195718 ncrna LOC106149961 uncharacterized LOC106149961 NW_004955458 518276 520439 - 106149961 AGCD01047131;GBDI01370925;XR_001236456 MODEL 8920730 protein-coding Litaf lipopolysaccharide induced TNF factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of late endosome membrane (ortholog) NW_004955442 7054418 7084973 + 102027463 AGCD01037613;GBBH01210558;XM_005391161;XM_013517903 XP_005391218;XP_013373357 MODEL 8941615 protein-coding LOC102012885 olfactory receptor 1052-like NW_004955511 1009362 1010300 + 102012885 AGCD01066353;XM_005408220 XP_005408277 MODEL 8972628 protein-coding Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 ENCODES a protein that exhibits CDP phosphatase activity (ortholog); CTPase activity (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN CTP metabolic process (ortholog); GDP catabolic process (ortholog); nucleobase-containing small molecule catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN autophagosome membrane (ortholog); Golgi membrane (ortholog); lysosomal membrane (ortholog) NW_004955403 46609211 46637622 - 102018456 AGCD01002864;AGCD01002865;AGCD01002866;GBBH01116869;XM_005373700;XM_005373701 XP_005373757;XP_005373758 MODEL 8830979 protein-coding Cep43 centrosomal protein 43 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of protein kinase activity (ortholog); positive regulation of cell growth (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955439 15029485 15059076 - 102026910 AGCD01035997;AGCD01035998;GBBH01037133;GBDK01027317;XM_005390729;XM_013517401;XR_001235215 XP_005390786;XP_013372855 MODEL 9051784 pseudo LOC102005667 uncharacterized LOC102005667 NW_004955454 13267651 13286711 + 102005667 AGCD01045432 MODEL 8796210 protein-coding Igf2r insulin like growth factor 2 receptor ENCODES a protein that exhibits cargo receptor activity (ortholog); D-mannose binding (ortholog); enzyme binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); G protein-coupled receptor signaling pathway (ortholog); Golgi to lysosome transport (ortholog); PARTICIPATES IN renin-angiotensin cascade pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cell surface (ortholog); clathrin coat (ortholog); early endosome (ortholog) NW_004955439 20754915 20874759 - 102013547 AGCD01036128;AGCD01036129;GBCE01004858;GBCE01004865;XM_013517350 XP_013372804 MODEL 8834394 pseudo LOC102006759 serum albumin-like NW_004955412 36036768 36051307 + 102006759 AGCD01013427;AGCD01013428;AGCD01013429;AGCD01013430;XM_005378660 MODEL 8771272 protein-coding Ackr3 atypical chemokine receptor 3 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); early endosome (ortholog) NW_004955453 195346 218034 - 102025429 AGCD01044586;AGCD01044587;AGCD01044588;GBCE01032564;XM_005395313 XP_005395370 MODEL 8714527 ncrna LOC102007111 uncharacterized LOC102007111 NW_004955415 1538810 1543595 + 102007111 AGCD01015868;GBDF01258856;XR_260258 MODEL 8725597 protein-coding Cmtm2 CKLF like MARVEL transmembrane domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); COVID-19 (ortholog) NW_004955433 23140178 23149252 + 102015883 AGCD01031952;GBDF01010744;XM_005388510 XP_005388567 MODEL 8829225 protein-coding Atraid all-trans retinoic acid induced differentiation factor ENCODES a protein that exhibits xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of osteoblast proliferation (ortholog); negative regulation of protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN lysosomal membrane (ortholog); nuclear envelope (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955469 9194656 9203292 + 102024550 AGCD01052496;GBDF01076159;XM_005400471 XP_005400528 MODEL 8757412 ncrna LOC102011707 uncharacterized LOC102011707 NW_004955446 1115766 1138545 - 102011707 AGCD01039953;GBDF01181940;XR_262364 MODEL 8986694 protein-coding Cited4 Cbp/p300 interacting transactivator with ED-rich tail 4 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); response to estrogen (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955537 688264 689562 - 102004857 AGCD01070870;GBDK01058306;XM_005410581 XP_005410638 MODEL 8831095 protein-coding Bzw1 basic leucine zipper and W2 domains 1 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955403 676384 688353 - 102003303 AGCD01001704;AGCD01001705;GBDF01009056;XM_005373238;XM_013511843 XP_005373295;XP_013367297 MODEL 39134213 misc_rna 7SK 7SK RNA 9017911 protein-coding Ccdc82 coiled-coil domain containing 82 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog) NW_004955412 1178695 1208883 - 102004914 AGCD01012509;AGCD01012510;AGCD01012511;GBCE01009133;GBCE01009135;XM_005377958 XP_005378015 MODEL 8781469 protein-coding Cd27 CD27 molecule ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN adaptive immune memory response involving T cells and B cells (ortholog); CD27 signaling pathway (ortholog); extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); Cachexia (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955413 4102740 4107739 + 102014761 AGCD01013600;GBDK01366680;XM_005378767;XM_005378768 XP_005378824;XP_005378825 MODEL 8823246 protein-coding Aqp6 aquaporin 6 ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); monoatomic anion channel activity (ortholog); INVOLVED IN nitrate transmembrane transport (ortholog); odontogenesis (ortholog); renal water transport (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) NW_004955547 567152 570880 + 102010415 AGCD01072164;GBDK01181608;XM_005411858 XP_005411915 MODEL 8775389 protein-coding Htr1e 5-hydroxytryptamine receptor 1E ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); serotonin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); ASSOCIATED WITH lung cancer (ortholog); thymoma (ortholog); uveal melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955411 13955905 14026555 + 102023013 AGCD01011905;AGCD01011906;AGCD01011907;XM_005377713 XP_005377770 MODEL 9036363 protein-coding Cavin2 caveolae associated protein 2 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN plasma membrane tubulation (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 7459038 7471809 + 102023546 AGCD01001857;GBDK01390302;XM_005373285 XP_005373342 MODEL 9053299 protein-coding Aatf apoptosis antagonizing transcription factor ENCODES a protein that exhibits leucine zipper domain binding (ortholog); protein kinase binding (ortholog); tau protein binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955451 929278 1033665 - 102027134 AGCD01042954;AGCD01042955;AGCD01042956;AGCD01042957;AGCD01042958;GBCQ01064782;XM_005393937;XM_005393938 XP_005393994;XP_005393995 MODEL 39133817 misc_rna 7SK 7SK RNA 39133953 misc_rna 7SK 7SK RNA 8863582 protein-coding Chd7 chromodomain helicase DNA binding protein 7 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); promoter-specific chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN adult heart development (ortholog); adult walking behavior (ortholog); aorta development (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH 3MC syndrome (ortholog); 46, XY Disorders of Sex Development (ortholog); 46,XY complete gonadal dysgenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955444 17859999 18067623 - 102029131 AGCD01039226;AGCD01039227;GBDJ01315010;XM_005392181;XM_005392182;XM_005392183 XP_005392238;XP_005392239;XP_005392240 MODEL 8773632 protein-coding Gfra1 GDNF family receptor alpha 1 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); integrin binding (ortholog); neurotrophin receptor activity (ortholog); INVOLVED IN cell migration (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); endosome (ortholog); external side of plasma membrane (ortholog) NW_004955431 20859152 21070886 - 102021035 AGCD01030485;AGCD01030486;AGCD01030487;AGCD01030488;AGCD01030489;AGCD01030490;GBDK01005285;XM_005387842;XM_005387843;XM_005387844;XM_005387845 XP_005387899;XP_005387900;XP_005387901;XP_005387902 MODEL 8733895 protein-coding Josd1 Josephin domain containing 1 ENCODES a protein that exhibits deubiquitinase activity (ortholog); INVOLVED IN cell motility (ortholog); endocytosis (ortholog); membrane biogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955413 24803189 24817150 - 102022904 AGCD01014379;GBCQ01097675;XM_005379269 XP_005379326 MODEL 9014539 protein-coding Calcoco2 calcium binding and coiled-coil domain 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of autophagosome maturation (ortholog); response to type II interferon (ortholog); xenophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 12443262 12469608 - 102030374 AGCD01043397;AGCD01043398;GBDJ01017568;XM_005394229;XM_013519115;XM_013519116;XM_013519117;XM_013519118;XR_001235948 XP_005394286;XP_013374569;XP_013374570;XP_013374571;XP_013374572 MODEL 8984852 protein-coding Dkk1 dickkopf WNT signaling pathway inhibitor 1 ENCODES a protein that exhibits co-receptor binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); receptor antagonist activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); endoderm development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH anodontia (ortholog); Bone Fractures (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955425 7353964 7357599 + 102017585 AGCD01025383;AGCD01025384;GBDK01196696;XM_013514768 XP_013370222 MODEL 8903297 ncrna LOC102004269 uncharacterized LOC102004269 NW_004955469 7286277 7287635 + 102004269 AGCD01052412;AGCD01052413;GBDF01308355;XR_263434 MODEL 8925601 protein-coding Eif4e2 eukaryotic translation initiation factor 4E family member 2 ENCODES a protein that exhibits mRNA cap binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); negative regulation of translation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); P-body (ortholog) NW_004955453 3395483 3424649 - 102013901 AGCD01044658;GBCQ01098153;XM_005395367;XM_005395369;XM_013519962;XM_013519963 XP_005395424;XP_005395426;XP_013375416;XP_013375417 MODEL 8901502 protein-coding Ina internexin neuronal intermediate filament protein alpha ENCODES a protein that exhibits protein-containing complex binding (ortholog); structural constituent of postsynaptic intermediate filament cytoskeleton (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); intermediate filament cytoskeleton organization (ortholog); neurofilament cytoskeleton organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); High Myopia (ortholog); Lupus Vasculitis, Central Nervous System (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); glutamatergic synapse (ortholog); neurofilament (ortholog) NW_004955485 7238723 7266995 - 102014787 AGCD01058648;AGCD01058649;GBDF01213804;XM_005403924 XP_005403981 MODEL 39131752 rrna 5S_rRNA 5S ribosomal RNA 8822598 pseudo LOC102011274 translocation protein SEC62 pseudogene NW_004955453 11024593 11120561 + 102011274 AGCD01044797;AGCD01044798;AGCD01044799;AGCD01044800 MODEL 8799751 protein-coding Agps alkylglycerone phosphate synthase ENCODES a protein that exhibits alkylglycerone-phosphate synthase activity (ortholog); INVOLVED IN lipid biosynthetic process (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN peroxisome (ortholog) NW_004955403 19253784 19381883 - 102006089 AGCD01002121;AGCD01002122;AGCD01002123;AGCD01002124;GBDJ01175162;XM_005373401 XP_005373458 MODEL 8836666 protein-coding Kcnq5 potassium voltage-gated channel subfamily Q member 5 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 46 (ortholog); FOUND IN calyx of Held (ortholog); clathrin coat (ortholog); plasma membrane (ortholog) NW_004955488 7406633 7928526 + 102003557 AGCD01059683;AGCD01059684;AGCD01059685;AGCD01059686;AGCD01059687;AGCD01059688;AGCD01059689;AGCD01059690;AGCD01059691;AGCD01059692;AGCD01059693;AGCD01059694;AGCD01059695;AGCD01059696;AGCD01059697;AGCD01059698;GBCE01157011;GBDI01207132;XM_005404480;XM_013504414;XM_013504415 XP_005404537;XP_013359868;XP_013359869 MODEL 8849685 protein-coding LOC102006768 uncharacterized LOC102006768 NW_004955415 15273704 15346189 - 102006768 AGCD01016337;AGCD01016338;XM_013512130 XP_013367584 MODEL 9009520 pseudo LOC102008594 eukaryotic translation initiation factor 2A-like NW_004955406 5948906 5974852 + 102008594 AGCD01005744 MODEL 9066730 protein-coding LOC102021873 olfactory receptor 52M1-like NW_004955414 20140566 20141519 - 102021873 AGCD01015358;XM_005380465 XP_005380522 MODEL 8900724 protein-coding Colq collagen like tail subunit of asymmetric acetylcholinesterase ENCODES a protein that exhibits heparin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); negative regulation of synaptic transmission, cholinergic (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN neuromuscular junction (ortholog); synapse (ortholog) NW_004955430 1956833 2019581 - 102012349 AGCD01029144;AGCD01029145;GBCE01037452;XM_005387306;XM_013515712 XP_005387363;XP_013371166 MODEL 9041720 protein-coding Esrra estrogen related receptor alpha ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955422 20768450 20775205 - 102011328 AGCD01023086;GBCB01005642;GBDF01188656;XM_005384600 XP_005384657 MODEL 8744069 ncrna LOC102009348 uncharacterized LOC102009348 NW_004955455 11123017 11124542 - 102009348 AGCD01045984;GBDF01074169;XR_262855;XR_262856 MODEL 8968131 protein-coding LOC102008239 prolyl-tRNA synthetase associated domain-containing protein 1 NW_004955424 27774507 27776459 - 102008239 AGCD01025126;GBCQ01153725;XM_005385777 XP_005385834 MODEL 8885594 ncrna LOC102010513 uncharacterized LOC102010513 NW_004955518 2093768 2169658 - 102010513 AGCD01067771;GBDI01245852;XR_001231842;XR_001231843;XR_001231844;XR_001231845;XR_001231846;XR_001231847;XR_001231848;XR_264567 MODEL 9020649 ncrna LOC102007113 uncharacterized LOC102007113 NW_004955415 15209941 15253124 + 102007113 AGCD01016333;AGCD01016334;AGCD01016335;GBDK01120163;XR_001233186 MODEL 39132158 rrna 5S_rRNA 5S ribosomal RNA 8826759 protein-coding Adck1 aarF domain containing kinase 1 INVOLVED IN negative regulation of mitochondrial fusion (ortholog); positive regulation of cristae formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955438 1638673 1760791 + 102019958 AGCD01034986;AGCD01034987;GBDF01291374;XM_005390216;XM_005390222;XM_013517182;XM_013517183;XM_013517184 XP_005390273;XP_005390279;XP_013372636;XP_013372637;XP_013372638 MODEL 8985901 protein-coding Atrip ATR interacting protein ASSOCIATED WITH Aicardi-Goutieres Syndrome 1 (ortholog); systemic lupus erythematosus (ortholog) NW_004955532 516772 533774 + 102026254 AGCD01070129;AGCD01070130;GBDF01044899;XM_005410152;XM_013507609 XP_005410209;XP_013363063 MODEL 8981339 protein-coding Gfra2 GDNF family receptor alpha 2 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); heparan sulfate binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of protein autophosphorylation (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Optic Nerve Injuries (ortholog); Parkinsonism (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 45235161 45324825 - 102027601 AGCD01002813;GBDK01236692;XM_005373635;XM_005373636;XM_005373637 XP_005373692;XP_005373693;XP_005373694 MODEL 8911773 protein-coding Grik5 glutamate ionotropic receptor kainate type subunit 5 ENCODES a protein that exhibits glutamate receptor activity (ortholog); glutamate-gated receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); chemical synaptic transmission (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955555 804907 865395 + 102003699 AGCD01073049;AGCD01073050;AGCD01073051;GBCE01044985;GBDF01253614;XM_005412394;XM_005412395 XP_005412451;XP_005412452 MODEL 9048452 ncrna LOC102004619 uncharacterized LOC102004619 NW_004955497 162494 196973 - 102004619 AGCD01062402;GBCC01014237;XR_264187 MODEL 8905162 protein-coding LOC102017785 60S acidic ribosomal protein P0-like NW_004955494 2559510 2560550 + 102017785 AGCD01061440;GBDF01135760;XM_013504925 XP_013360379 MODEL 8928726 protein-coding Edaradd EDAR associated via death domain INVOLVED IN hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Cafe-au-Lait Spots (ortholog); ectodermal dysplasia (ortholog); ectodermal dysplasia 10A (ortholog) NW_004955492 3709819 3777506 - 102019182 AGCD01060699;AGCD01060700;AGCD01060701;GBDI01249623;XM_005404937;XM_005404939;XM_005404940;XM_013504737 XP_005404994;XP_005404996;XP_005404997;XP_013360191 MODEL 8952842 protein-coding Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 ENCODES a protein that exhibits catalytic activity, acting on a tRNA (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955453 14196728 14204344 - 102015801 AGCD01044859;GBBH01140731;XM_005395563;XM_005395566;XM_005395567;XM_013519851 XP_005395620;XP_005395623;XP_005395624;XP_013375305 MODEL 39134214 misc_rna 7SK 7SK RNA 8893761 pseudo LOC102009739 ubiquitin-conjugating enzyme E2 E3 pseudogene NW_004955427 22033843 22034577 - 102009739 AGCD01027464 MODEL 39131458 protein-coding LITAFD LITAF domain containing 8989259 protein-coding LOC102012891 uncharacterized LOC102012891 NW_004955523 1028153 1037283 - 102012891 AGCD01068489;GBCE01116809;XM_013507151;XR_001231927;XR_001231928;XR_001231929;XR_001231930;XR_001231931;XR_001231932;XR_001231933;XR_001231934;XR_001231935;XR_001231936;XR_001231937 XP_013362605 MODEL 8735588 trna trnA(tgc) tRNA-Ala MT 5014 5083 - 15822221 8982276 ncrna LOC102005668 uncharacterized LOC102005668 NW_004955408 4130103 4136421 + 102005668 AGCD01008089;GBDF01241145;XR_259658 MODEL 8923016 protein-coding Cdk12 cyclin dependent kinase 12 ENCODES a protein that exhibits cyclin binding (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cyclin K-CDK12 complex (ortholog); nuclear cyclin-dependent protein kinase holoenzyme complex (ortholog); nuclear speck (ortholog) NW_004955451 14244392 14345885 + 102019460 AGCD01043538;AGCD01043539;AGCD01043540;AGCD01043541;AGCD01043542;AGCD01043543;AGCD01043544;AGCD01043545;AGCD01043546;AGCD01043547;GBBH01061497;GBDI01323519;XM_013519192 XP_013374646 MODEL 8833190 protein-coding Igfals insulin like growth factor binding protein acid labile subunit ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to growth hormone stimulus (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Acid-Labile Subunit Deficiency (ortholog); anorexia nervosa (ortholog); Burns (ortholog); FOUND IN insulin-like growth factor ternary complex (ortholog) NW_004955442 15469602 15482115 + 102018033 AGCD01037874;AGCD01037875;GBCQ01030842;XM_005391510;XM_005391511;XM_013517676 XP_005391567;XP_005391568;XP_013373130 MODEL 8774168 protein-coding Htr1f 5-hydroxytryptamine receptor 1F ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); serotonin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); migraine (ortholog); FOUND IN plasma membrane (ortholog) NW_004955407 5512124 5632458 - 102025434 AGCD01006921;AGCD01006922;AGCD01006923;AGCD01006924;GBCQ01013730;XM_013506130;XM_013506138;XM_013506141;XM_013506144 XP_013361584;XP_013361592;XP_013361595;XP_013361598 MODEL 8756689 ncrna LOC102003910 uncharacterized LOC102003910 NW_004955547 2449218 2452224 + 102003910 AGCD01072281;GBDF01261280;XR_001232226;XR_001232227;XR_264909 MODEL 10072535 protein-coding LOC106149962 small nuclear ribonucleoprotein E-like NW_004955406 14676735 14677931 + 106149962 AGCD01005967;XM_013520922 XP_013376376 MODEL 8851049 protein-coding Cmtm3 CKLF like MARVEL transmembrane domain containing 3 INVOLVED IN blastocyst hatching (ortholog); positive regulation of B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955433 23178062 23185666 + 102022217 AGCD01031955;GBCE01029451;XM_005388470 XP_005388527 MODEL 8907554 protein-coding Ackr4 atypical chemokine receptor 4 ENCODES a protein that exhibits chemokine receptor activity (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog) NW_004955501 5922727 5928735 - 102005062 AGCD01064175;GBDK01433060;XM_005406828;XM_005406830;XM_005406832;XM_005406833 XP_005406885;XP_005406887;XP_005406889;XP_005406890 MODEL 8893042 pseudo LOC102011715 pre-mRNA-splicing factor SLU7 pseudogene NW_004955402 54098472 54100151 + 102011715 AGCD01001386 MODEL 8830929 protein-coding Aloxe3 arachidonate epidermal lipoxygenase 3 ENCODES a protein that exhibits hydroperoxy icosatetraenoate dehydratase activity (ortholog); hydroperoxy icosatetraenoate isomerase activity (ortholog); intramolecular hydroxytransferase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); bicellular tight junction assembly (ortholog); ceramide biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog) NW_004955467 8844805 8869230 + 102025105 AGCD01051475;AGCD01051476;AGCD01051477;GBCC01051993;XM_005399436 XP_005399493 MODEL 8750379 protein-coding Chd8 chromodomain helicase DNA binding protein 8 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN brain development (ortholog); chromatin remodeling (ortholog); digestive tract development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); apraxia (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955550 2115649 2175687 - 102010636 AGCD01072611;GBDK01006485;XM_005412107;XM_005412108;XM_005412109;XM_005412110;XM_005412111;XM_005412112;XM_005412113;XM_005412115 XP_005412164;XP_005412165;XP_005412166;XP_005412167;XP_005412168;XP_005412169;XP_005412170;XP_005412172 MODEL 8971175 protein-coding Bzw2 basic leucine zipper and W2 domains 2 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955410 19833008 19874647 + 102022680 AGCD01011031;GBDI01063049;XM_005377337 XP_005377394 MODEL 8742902 protein-coding Calcr calcitonin receptor ENCODES a protein that exhibits amylin receptor activity (ortholog); amyloid-beta binding (ortholog); calcitonin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); Herpes Simplex Encephalitis (ortholog); FOUND IN acrosomal vesicle (ortholog); amylin receptor complex 1 (ortholog); amylin receptor complex 2 (ortholog) NW_004955432 10310776 10391029 - 102009867 AGCD01030930;GBCQ01059373;XM_005388037 XP_005388094 MODEL 8747976 protein-coding Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ENCODES a protein that exhibits ADP phosphatase activity (ortholog); CDP phosphatase activity (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN 'de novo' post-translational protein folding (ortholog); protein N-linked glycosylation (ortholog); UDP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) NW_004955523 1407812 1441829 + 102022732 AGCD01068517;AGCD01068518;AGCD01068519;GBDF01052180;XM_013507129;XM_013507130;XM_013507131;XM_013507132;XM_013507133;XM_013507134;XM_013507135;XM_013507136;XM_013507137 XP_013362583;XP_013362584;XP_013362585;XP_013362586;XP_013362587;XP_013362588;XP_013362589;XP_013362590;XP_013362591 MODEL 8912452 protein-coding Cd274 CD274 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); immune response (ortholog); negative regulation of activated T cell proliferation (ortholog); ASSOCIATED WITH acute myocarditis (ortholog); adult T-cell leukemia/lymphoma (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); early endosome membrane (ortholog); endomembrane system (ortholog) NW_004955434 9487309 9508366 + 102003272 AGCD01032303;GBDI01086689;XM_005388660;XM_013516371;XM_013516372;XM_013516373;XM_013516374 XP_005388717;XP_013371825;XP_013371826;XP_013371827;XP_013371828 MODEL 8973886 protein-coding Dkk2 dickkopf WNT signaling pathway inhibitor 2 ENCODES a protein that exhibits co-receptor binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955496 2489373 2578310 + 102006790 AGCD01062269;AGCD01062270;GBBH01218890;XM_005406215 XP_005406272 MODEL 39131753 rrna 5S_rRNA 5S ribosomal RNA 8737268 protein-coding Calcrl calcitonin receptor like receptor ENCODES a protein that exhibits adrenomedullin binding (ortholog); adrenomedullin receptor activity (ortholog); calcitonin gene-related peptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); angiogenesis (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); brain infarction (ortholog); COVID-19 (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); CGRP receptor complex (ortholog); cytoplasm (ortholog) NW_004955403 11016753 11118494 + 102011931 AGCD01001945;AGCD01001946;AGCD01001947;AGCD01001948;GBDK01017484;XM_005373330;XM_005373331;XM_005373332;XM_005373333;XM_005373334;XM_013512405 XP_005373387;XP_005373388;XP_005373389;XP_005373390;XP_005373391;XP_013367859 MODEL 39133818 misc_rna 7SK 7SK RNA 8897032 protein-coding LOC102004271 olfactory receptor 51G2-like NW_004955414 20963996 20965027 - 102004271 AGCD01015398;XM_005380489 XP_005380546 MODEL 9065087 pseudo LOC102006771 thyroid hormone receptor-associated protein 3-like NW_004955416 9263788 9266478 + 102006771 AGCD01017083 MODEL 8881163 ncrna LOC102008595 uncharacterized LOC102008595 NW_004955455 5552047 5558107 + 102008595 AGCD01045738;GBDF01182597;XR_001236290;XR_001236291 MODEL 8932846 protein-coding Ciz1 CDKN1A interacting zinc finger protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); positive regulation of DNA-templated DNA replication initiation (ortholog); random inactivation of X chromosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955570 716124 732551 - 102021494 AGCD01074760;AGCD01074761;GBDF01007463;GBDF01007479;XM_013509385 XP_013364839 MODEL 8767676 ncrna LOC102008245 uncharacterized LOC102008245 NW_004955429 19596397 19597902 - 102008245 AGCD01028966;GBCB01088322;XR_261365 MODEL 9057926 ncrna LOC102010517 uncharacterized LOC102010517 NW_004955530 2532397 2639683 + 102010517 AGCD01069921;AGCD01069922;AGCD01069923;AGCD01069924;AGCD01069925;AGCD01069926;AGCD01069927;GBDF01160127;XR_001231996;XR_001231997;XR_001231998;XR_264710 MODEL 9020868 protein-coding Ccdc83 coiled-coil domain containing 83 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955414 6982591 7029337 - 102017440 AGCD01014944;GBDI01165521;XM_005379766;XM_013511801;XM_013511802;XM_013511803;XM_013511804;XM_013511805;XM_013511806 XP_005379823;XP_013367255;XP_013367256;XP_013367257;XP_013367258;XP_013367259;XP_013367260 MODEL 8932807 protein-coding Josd2 Josephin domain containing 2 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955559 655178 659412 + 102017399 AGCD01073606;GBCQ01035382;XM_005412779;XM_005412780;XM_013509061 XP_005412836;XP_005412837;XP_013364515 MODEL 9057865 protein-coding Aqp7 aquaporin 7 ENCODES a protein that exhibits glycerol channel activity (ortholog); urea channel activity (ortholog); urea transmembrane transporter activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); renal water absorption (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH cervical cancer (ortholog); colitis (ortholog); colon adenocarcinoma (ortholog); FOUND IN brush border membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955472 2283426 2297251 + 102008526 AGCD01053451;AGCD01053452;AGCD01053453;GBDI01353209;XM_005401099;XM_005401100;XM_005401101;XM_005401102;XM_005401103;XM_013522949;XM_013522950 XP_005401156;XP_005401157;XP_005401158;XP_005401159;XP_005401160;XP_013378403;XP_013378404 MODEL 8986037 ncrna LOC102004620 uncharacterized LOC102004620 NW_004955497 6989452 7027099 - 102004620 AGCD01062651;AGCD01062652;AGCD01062653;AGCD01062654;GBBH01127272;XR_001231442;XR_001231443;XR_001231444 MODEL 8790166 protein-coding Cep44 centrosomal protein 44 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); centriole-centriole cohesion (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955403 32780077 32799015 - 102022990 AGCD01002441;GBDJ01423256;XM_005373537;XM_013513262;XM_013513268;XM_013513270;XM_013513273;XM_013513277 XP_005373594;XP_013368716;XP_013368722;XP_013368724;XP_013368727;XP_013368731 MODEL 8797847 protein-coding Inafm2 InaF motif containing 2 NW_004955416 7251468 7253776 + 102018596 AGCD01016971;GBBH01076529;GBDI01296119;XM_013512601 XP_013368055 MODEL 8860607 protein-coding Fcsk fucose kinase ENCODES a protein that exhibits fucokinase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); GDP-L-fucose salvage (ortholog); response to dopamine (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH bladder diverticulum (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955484 3259165 3278621 + 102003876 AGCD01058168;AGCD01058169;GBDI01127396;XM_005403481;XM_005403482;XM_005403483 XP_005403538;XP_005403539;XP_005403540 MODEL 8724212 protein-coding Chd9 chromodomain helicase DNA binding protein 9 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN chromatin organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955433 10900771 11161161 + 102024041 AGCD01031639;AGCD01031640;AGCD01031641;AGCD01031642;AGCD01031643;AGCD01031644;AGCD01031645;AGCD01031646;AGCD01031647;AGCD01031648;AGCD01031649;GBCE01009599;XM_005388286;XM_005388287;XM_005388293;XM_005388294;XM_013516196;XM_013516197;XM_013516198;XM_013516199;XM_013516200;XM_013516201 XP_005388343;XP_005388344;XP_005388350;XP_005388351;XP_013371650;XP_013371651;XP_013371652;XP_013371653;XP_013371654;XP_013371655 MODEL 9060697 protein-coding Lix1 limb and CNS expressed 1 NW_004955418 15509586 15575059 + 102008727 AGCD01019106;AGCD01019107;GBBH01067993;XM_005382220;XM_013513047 XP_005382277;XP_013368501 MODEL 8839928 pseudo LOC102011280 probable methyltransferase-like protein 15 NW_004955457 7384810 7385987 - 102011280 AGCD01046877 MODEL 8853036 protein-coding Cavin3 caveolae associated protein 3 ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); cortical actin cytoskeleton organization (ortholog); negative regulation of fermentation (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955414 22052885 22054672 - 102018916 AGCD01015441;GBDJ01019235;XM_005380131 XP_005380188 MODEL 8778983 protein-coding Anln anillin actin binding protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); mitotic cytokinesis (ortholog); podocyte cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN actin cytoskeleton (ortholog); actomyosin contractile ring (ortholog); bleb (ortholog) NW_004955460 6972077 7033900 - 102003627 AGCD01048477;AGCD01048478;GBDF01156973;XM_005397763;XM_005397764;XM_005397767 XP_005397820;XP_005397821;XP_005397824 MODEL 39133954 misc_rna 7SK 7SK RNA 8751752 protein-coding Kcnrg potassium channel regulator ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of delayed rectifier potassium channel activity (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955431 3395920 3402494 + 102012351 AGCD01029964;GBDI01312589;XM_005387892 XP_005387949 MODEL 8794679 protein-coding Aatk apoptosis associated tyrosine kinase ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); brain development (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955506 1828326 1868302 + 102012563 AGCD01065275;AGCD01065276;AGCD01065277;GBBH01130375;XM_005407305;XM_005407307;XM_005407308;XM_005407310;XM_005407311;XM_013506068;XM_013506069;XM_013506070;XM_013506071 XP_005407362;XP_005407364;XP_005407365;XP_005407367;XP_005407368;XP_013361522;XP_013361523;XP_013361524;XP_013361525 MODEL 8892792 pseudo LOC102021874 transmembrane protein 50A pseudogene NW_004955415 9946775 9947256 - 102021874 AGCD01016117;XM_005380691 MODEL 39133819 misc_rna 7SK 7SK RNA 9003964 ncrna LOC102011719 uncharacterized LOC102011719 NW_004955799 1703 3502 + 102011719 AGCD01078370;GBDF01089331;XR_265186 MODEL 39131887 rrna 5S_rRNA 5S ribosomal RNA 8870917 protein-coding Atrn attractin ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cerebellum development (ortholog); myelination (ortholog); pigmentation (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955415 14341635 14505955 + 102027174 AGCD01016297;AGCD01016298;AGCD01016299;GBCB01099530;XM_005380794;XM_005380795 XP_005380851;XP_005380852 MODEL 8788376 pseudo LOC102008246 olfactory receptor 5A1-like NW_004955511 3810447 3812052 - 102008246 AGCD01066476 MODEL 9015681 pseudo LOC102009740 aldose reductase-related protein 2 pseudogene NW_004955428 145019 146060 + 102009740 AGCD01027566 MODEL 8919683 protein-coding Edc3 enhancer of mRNA decapping 3 ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 50 (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog) NW_004955450 3193150 3249933 + 102011380 AGCD01042426;GBDF01082254;XM_005393548;XM_005393549 XP_005393605;XP_005393606 MODEL 8974542 trna Trnaa-agc transfer RNA alanine (anticodon AGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978814 AGCD01022921;AGCD01037757;AGCD01039088;AGCD01050627;AGCD01050631;AGCD01052488;AGCD01057602;AGCD01057606;AGCD01058153 MODEL 8965003 protein-coding Agr2 anterior gradient 2, protein disulphide isomerase family member ENCODES a protein that exhibits dystroglycan binding (ortholog); epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); digestive tract morphogenesis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955410 19984768 19995446 - 102023236 AGCD01011039;AGCD01011040;GBDF01005562;XM_005377338;XM_005377339 XP_005377395;XP_005377396 MODEL 39131754 rrna 5S_rRNA 5S ribosomal RNA 8856999 protein-coding Cdk13 cyclin dependent kinase 13 ENCODES a protein that exhibits cyclin binding (ortholog); protein kinase binding (ortholog); RNA polymerase II CTD heptapeptide repeat kinase activity (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); hemopoiesis (ortholog); negative regulation of stem cell differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Ataxia (ortholog); atrial heart septal defect (ortholog); FOUND IN cyclin K-CDK13 complex (ortholog); nuclear cyclin-dependent protein kinase holoenzyme complex (ortholog); nuclear speck (ortholog) NW_004955460 3590854 3701148 - 102016677 AGCD01048415;AGCD01048416;GBBH01051562;GBDK01237891;XM_013521155 XP_013376609 MODEL 8909655 protein-coding Igfbp1 insulin like growth factor binding protein 1 ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); positive regulation of cell growth (ortholog); response to insulin (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); breast cancer (ortholog); Burns (ortholog); FOUND IN extracellular region (ortholog) NW_004955456 6810461 6814944 - 102011954 AGCD01046378;GBCQ01013594;XM_005396640 XP_005396697 MODEL 8701672 protein-coding LOC102009351 olfactory receptor 1361-like NW_004955408 1568710 1569651 + 102009351 AGCD01007965;XM_005376033 XP_005376090 MODEL 8866145 protein-coding Esrrb estrogen related receptor beta ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cell population proliferation (ortholog); embryonic placenta development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 35 (ortholog); cholangiocarcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); cytoplasm (ortholog) NW_004955438 365375 534086 + 102029663 AGCD01034946;AGCD01034947;AGCD01034948;AGCD01034949;AGCD01034950;AGCD01034951;GBCQ01188054;XM_005390154;XM_013517291;XM_013517292 XP_005390211;XP_013372745;XP_013372746 MODEL 8952622 protein-coding Kcns1 potassium voltage-gated channel modifier subfamily S member 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of potassium ion transmembrane transport (ortholog); ASSOCIATED WITH intracranial hypertension (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955445 12293394 12299741 + 102004530 AGCD01039750;GBCB01012719;XM_013518244 XP_013373698 MODEL 8810394 ncrna LOC102007114 uncharacterized LOC102007114 NW_004955476 1399542 1400885 - 102007114 AGCD01055205;GBDF01224897;XR_001230779 MODEL 8703174 protein-coding Cmtm4 CKLF like MARVEL transmembrane domain containing 4 INVOLVED IN glycoprotein biosynthetic process (ortholog); immune response (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955433 23189925 23245722 - 102016191 AGCD01031955;GBBH01142816;XM_013516195 XP_013371649 MODEL 8840638 protein-coding Adck2 aarF domain containing kinase 2 INVOLVED IN regulation of ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955494 2736466 2745491 - 102007670 AGCD01061448;GBCB01025083;GBCE01137623;XM_005405535 XP_005405592 MODEL 39131367 protein-coding C10orf143 chromosome 10 open reading frame 143 8777383 protein-coding Gfra3 GDNF family receptor alpha 3 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); glial cell-derived neurotrophic factor receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); neuron development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); prostate cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955418 2152887 2162883 + 102003341 AGCD01018746;AGCD01018747;GBBH01050450;GBDF01052356;XM_013512867 XP_013368321 MODEL 39134215 misc_rna 7SK 7SK RNA 9024278 protein-coding Alpk1 alpha kinase 1 ENCODES a protein that exhibits monosaccharide binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); innate immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955457 14325278 14444368 - 102019777 AGCD01047071;AGCD01047072;GBDF01014659;GBDJ01164744;XM_005397100;XM_013520771;XM_013520772 XP_005397157;XP_013376225;XP_013376226 MODEL 8727328 protein-coding Eif4e3 eukaryotic translation initiation factor 4E family member 3 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955421 16354282 16520422 + 102006921 AGCD01021999;AGCD01022000;AGCD01022001;AGCD01022002;AGCD01022003;AGCD01022004;GBBH01218978;GBCE01142138;XM_005383789;XM_013513679 XP_005383846;XP_013369133 MODEL 8821153 protein-coding LOC102010524 protein S100-A6-like NW_004955545 107981 108711 - 102010524 AGCD01071767;XM_005411404 XP_005411461 MODEL 8904442 protein-coding Ccdc85a coiled-coil domain containing 85A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN adherens junction (ortholog) NW_004955424 26756844 26934525 - 102003890 AGCD01025088;AGCD01025089;AGCD01025090;AGCD01025091;AGCD01025092;GBDK01316929;XM_005385762;XM_005385763;XM_005385764;XM_005385765;XM_005385766;XM_005385767;XM_005385768 XP_005385819;XP_005385820;XP_005385821;XP_005385822;XP_005385823;XP_005385824;XP_005385825 MODEL 8961721 ncrna LOC102004621 uncharacterized LOC102004621 NW_004955505 1555708 1583604 - 102004621 AGCD01064974;AGCD01064975;GBDF01014944;XR_001231574;XR_264301 MODEL 9059268 protein-coding Dkk3 dickkopf WNT signaling pathway inhibitor 3 INVOLVED IN adrenal gland development (ortholog); negative regulation of aldosterone biosynthetic process (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); cervical cancer (ortholog); Fibrosis (ortholog) NW_004955414 27466636 27507186 - 102011436 AGCD01015663;GBDK01021738;XM_005380293;XM_013512053 XP_005380350;XP_013367507 MODEL 8760552 protein-coding Htr2a 5-hydroxytryptamine receptor 2A ENCODES a protein that exhibits 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding (ortholog); G protein-coupled serotonin receptor activity (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); behavioral response to cocaine (ortholog); detection of mechanical stimulus involved in sensory perception of pain (ortholog); ASSOCIATED WITH acute stress disorder (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cell body fiber (ortholog); cytoplasmic vesicle (ortholog); dendrite (ortholog) NW_004955431 583165 646991 - 102012228 AGCD01029873;GBDK01201101;XM_005387547 XP_005387604 MODEL 8824283 protein-coding Commd1 copper metabolism domain containing 1 ENCODES a protein that exhibits copper ion binding (ortholog); identical protein binding (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); copper ion homeostasis (ortholog); Golgi to plasma membrane transport (ortholog); ASSOCIATED WITH allergic disease (ortholog); cervical cancer (ortholog); Chronic Hepatitis (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955424 21962837 22067745 - 102020137 AGCD01024921;AGCD01024922;AGCD01024923;AGCD01024924;AGCD01024925;AGCD01024926;AGCD01024927;AGCD01024928;AGCD01024929;AGCD01024930;GBCE01056265;GBDI01125496;XM_013514647 XP_013370101 MODEL 8728093 pseudo LOC102003912 S-phase kinase-associated protein 1 pseudogene NW_004955442 6806797 6817973 + 102003912 AGCD01037597;AGCD01037598;AGCD01037599 MODEL 8788985 protein-coding Fdft1 farnesyl-diphosphate farnesyltransferase 1 ENCODES a protein that exhibits squalene synthase [NAD(P)H] activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); farnesyl diphosphate metabolic process (ortholog); zymosterol biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955403 53068011 53081499 + 102003195 AGCD01003032;GBBH01062766;GBCQ01002946;XM_005373829 XP_005373886 MODEL 8789688 ncrna LOC102004272 uncharacterized LOC102004272 NW_004955415 5517401 5522758 + 102004272 AGCD01015995;GBDK01393200;XR_260271 MODEL 8987477 ncrna LOC102006774 uncharacterized LOC102006774 NW_004955482 2917132 2929375 + 102006774 AGCD01057257;GBDF01076956;XR_263823 MODEL 8921357 protein-coding Cald1 caldesmon 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); positive regulation of protein binding (ortholog); ASSOCIATED WITH Acute Otitis Media; cholangiocarcinoma (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN actin cap (ortholog); actin cytoskeleton (ortholog); actin filament (ortholog) NW_004955494 7578162 7675558 - 102016067 AGCD01061553;GBCQ01003575;XM_005405503;XM_013504981;XM_013504982;XM_013504983;XM_013504984;XM_013504985 XP_005405560;XP_013360435;XP_013360436;XP_013360437;XP_013360438;XP_013360439 MODEL 9014292 protein-coding LOC102008596 keratin-associated protein 20-2-like NW_004955407 30188698 30188859 + 102008596 AGCD01007628;XM_005375645 XP_005375702 MODEL 8765147 ncrna LOC102017793 uncharacterized LOC102017793 NW_004955499 5632515 5635424 - 102017793 AGCD01063523;GBCQ01045824;XR_264219 MODEL 9013611 ncrna LOC102021878 uncharacterized LOC102021878 NW_004955418 1272614 1293248 - 102021878 AGCD01018714;GBDF01122696;XR_260535 MODEL 9033659 protein-coding Grin1 glutamate ionotropic receptor NMDA type subunit 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN basolateral plasma membrane; neuronal cell body; cell surface (ortholog) NW_004955513 5154864 5178636 + 102005740 AGCD01066961;GBDF01032862;XM_005408585;XM_005408586;XM_005408587;XM_005408588;XM_005408589;XM_005408590;XM_005408591;XM_005408592;XR_264481 XP_005408642;XP_005408643;XP_005408644;XP_005408645;XP_005408646;XP_005408647;XP_005408648;XP_005408649 MODEL 8815736 protein-coding LOC102012892 uncharacterized LOC102012892 NW_004955526 2993975 3028797 + 102012892 AGCD01069325;AGCD01069326;XM_013507354 XP_013362808 MODEL 39133820 misc_rna 7SK 7SK RNA 8773969 ncrna LOC102011721 uncharacterized LOC102011721 NW_004955403 45969900 45972939 - 102011721 AGCD01002845;XR_259243 MODEL 8769838 protein-coding Ackr5 atypical chemokine receptor 5 ENCODES a protein that exhibits adrenomedullin receptor activity (ortholog); C-C chemokine binding (ortholog); C-X-C chemokine binding (ortholog); INVOLVED IN negative regulation of chemokine-mediated signaling pathway (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); pulmonary hypertension (ortholog); FOUND IN endosome (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) NW_004955458 4749966 4754314 + 102018161 AGCD01047438;GBBH01222017;XM_005397336 XP_005397393 MODEL 9018464 protein-coding Cd276 CD276 molecule ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of T cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955450 3884437 3896416 - 102029252 AGCD01042447;AGCD01042448;GBBH01115553;GBCB01111175;XM_013519040 XP_013374494 MODEL 8830541 ncrna LOC102005676 uncharacterized LOC102005676 NW_004955460 10833953 10838057 + 102005676 AGCD01048618;AGCD01048619;GBDI01033534;XR_263054 MODEL 8925307 protein-coding Aqp8 aquaporin 8 ENCODES a protein that exhibits ammonium channel activity (ortholog); methylammonium channel activity (ortholog); urea channel activity (ortholog); INVOLVED IN ammonium import across plasma membrane (ortholog); ammonium transmembrane transport (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH brain ischemia (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955493 3550697 3558875 + 102003458 AGCD01061001;GBDF01047526;XM_005405129 XP_005405186 MODEL 8945699 protein-coding Entpd6 ectonucleoside triphosphate diphosphohydrolase 6 ENCODES a protein that exhibits CDP phosphatase activity (ortholog); GDP phosphatase activity (ortholog); guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity (ortholog); INVOLVED IN response to calcium ion (ortholog); response to magnesium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955415 31219909 31245107 + 102010479 AGCD01016671;AGCD01016672;GBDK01241622;XM_005380988 XP_005381045 MODEL 8859967 protein-coding Inava innate immunity activator INVOLVED IN adherens junction maintenance (ortholog); innate immune response (ortholog); intestinal epithelial structure maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); inflammatory bowel disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955406 37086302 37107221 + 102006977 AGCD01006571;GBDI01027678;XM_005375150;XM_005375151;XM_005375152 XP_005375207;XP_005375208;XP_005375209 MODEL 8763593 ncrna LOC102009741 uncharacterized LOC102009741 NW_004955509 2061123 2079468 + 102009741 AGCD01065988;XR_001231659;XR_264399 MODEL 8958372 protein-coding Chdh choline dehydrogenase ENCODES a protein that exhibits choline dehydrogenase activity (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); congestive heart failure (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955430 3797924 3831326 - 102003678 AGCD01029223;AGCD01029224;AGCD01029225;AGCD01029226;AGCD01029227;GBBH01089524;GBDJ01406665;XM_013515612 XP_013371066 MODEL 9008981 protein-coding Lix1l limb and CNS expressed 1 like INVOLVED IN actin cytoskeleton organization (ortholog); gene expression (ortholog); mitral valve development (ortholog) NW_004955568 136482 158531 + 102020853 AGCD01074503;AGCD01074504;GBBH01166392;GBDI01181571;XM_013509354 XP_013364808 MODEL 8968190 protein-coding Cavin4 caveolae associated protein 4 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); ASSOCIATED WITH melanoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955419 25181395 25188951 - 102011007 AGCD01020374;GBCB01005766;XM_005382806 XP_005382863 MODEL 8704333 ncrna LOC102011284 uncharacterized LOC102011284 NW_004955460 12592756 12593305 - 102011284 AGCD01048661;GBDF01041740;XR_263061 MODEL 39133955 misc_rna 7SK 7SK RNA 39131755 rrna 5S_rRNA 5S ribosomal RNA 39131540 protein-coding C11orf53 chromosome 11 open reading frame 53 8740345 protein-coding Esrrg estrogen related receptor gamma ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); estrogen response element binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Fetal Growth Retardation (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog) NW_004955406 1260240 1784652 + 102009797 AGCD01005630;AGCD01005631;AGCD01005632;AGCD01005633;AGCD01005634;AGCD01005635;AGCD01005636;GBCB01100801;XM_005374714;XM_013519877;XM_013519883;XM_013519891;XM_013519896;XM_013519901;XM_013519909;XM_013519919;XM_013519926 XP_005374771;XP_013375331;XP_013375337;XP_013375345;XP_013375350;XP_013375355;XP_013375363;XP_013375373;XP_013375380 MODEL 8791738 pseudo LOC102008247 anaphase-promoting complex subunit 7 pseudogene NW_004955430 15868219 15872040 - 102008247 AGCD01029620 MODEL 8857570 ncrna LOC102010525 uncharacterized LOC102010525 NW_004955440 3346013 3352979 + 102010525 AGCD01036240;GBBH01169042;XR_262002 MODEL 8784296 ncrna LOC102011725 uncharacterized LOC102011725 NW_004955404 11149721 11163056 - 102011725 AGCD01003414;AGCD01003415;GBDF01148811;XR_259301 MODEL 8978760 protein-coding Atrnl1 attractin like 1 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955431 19994365 20745018 + 102019096 AGCD01030460;AGCD01030461;AGCD01030462;AGCD01030463;AGCD01030464;AGCD01030465;AGCD01030466;AGCD01030467;AGCD01030468;AGCD01030469;AGCD01030470;AGCD01030471;AGCD01030472;AGCD01030473;AGCD01030474;AGCD01030475;AGCD01030476;AGCD01030477;AGCD01030478;AGCD01030479;AGCD01030480;AGCD01030481;AGCD01030482;GBBH01210686;GBDF01193111;XM_013515898 XP_013371352 MODEL 8918547 protein-coding Ano1 anoctamin 1 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to peptide (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog); glutamatergic synapse (ortholog) NW_004955422 16064526 16213614 - 102021678 AGCD01022891;AGCD01022892;GBDK01414131;XM_005384239;XM_005384240;XM_005384241;XM_005384242;XM_005384243;XM_005384244;XM_005384246;XM_005384247;XM_013514309;XM_013514310 XP_005384296;XP_005384297;XP_005384298;XP_005384299;XP_005384300;XP_005384301;XP_005384303;XP_005384304;XP_013369763;XP_013369764 MODEL 8992721 protein-coding Edc4 enhancer of mRNA decapping 4 PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8820578 8832428 - 102020916 AGCD01058398;GBBH01033452;XM_005403616;XM_013503883 XP_005403673;XP_013359337 MODEL 9038031 protein-coding LOC102004626 olfactory receptor 5B2-like NW_004955511 3096845 3097774 - 102004626 AGCD01066442;XM_013506380 XP_013361834 MODEL 8937504 protein-coding Ckap2 cytoskeleton associated protein 2 INVOLVED IN microtubule polymerization (ortholog); mitotic cytokinesis (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955431 5416596 5429465 - 102010613 AGCD01030028;AGCD01030029;GBDF01008509;GBDI01161937;XM_013515726 XP_013371180 MODEL 8891615 protein-coding Dkkl1 dickkopf like acrosomal protein 1 INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of testosterone biosynthetic process (ortholog); penetration of zona pellucida (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955559 1445082 1449167 - 102018660 AGCD01073646;GBDF01002816;XM_005412889;XM_005412890 XP_005412946;XP_005412947 MODEL 8944397 protein-coding Agrn agrin ENCODES a protein that exhibits acetylcholine receptor regulator activity (ortholog); ATPase inhibitor activity (ortholog); BMP binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN basement membrane; axonal growth cone (ortholog); cell surface (ortholog) NW_004955486 9674103 9704994 - 102029867 AGCD01059195;GBCQ01009261;GBDK01013959;XM_013504201 XP_013359655 MODEL 8839304 protein-coding Cdk14 cyclin dependent kinase 14 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytoplasmic cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955432 7787600 8335726 + 102023387 AGCD01030866;AGCD01030867;AGCD01030868;AGCD01030869;AGCD01030870;AGCD01030871;AGCD01030872;AGCD01030873;AGCD01030874;GBDF01088455;XM_005387994;XM_005387996;XM_013516047 XP_005388051;XP_005388053;XP_013371501 MODEL 8872806 pseudo LOC102009352 DCN1-like protein 5 pseudogene NW_004955456 8139806 8140820 + 102009352 AGCD01046454 MODEL 8798140 pseudo LOC102003915 SAFB-like transcription modulator NW_004955445 12049621 12053924 - 102003915 AGCD01039731 MODEL 8984425 pseudo LOC102007117 pre-mRNA-splicing factor 38A pseudogene NW_004955476 3480571 3481491 - 102007117 AGCD01055252 MODEL 8812203 protein-coding Abat 4-aminobutyrate aminotransferase ENCODES a protein that exhibits (S)-3-amino-2-methylpropionate:2-oxoglutarate transaminase activity (ortholog); 4-aminobutyrate:2-oxoglutarate transaminase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cerebellum development (ortholog); copulation (ortholog); exploration behavior (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN 4-aminobutyrate transaminase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955442 9422849 9516054 - 102018440 AGCD01037679;AGCD01037680;AGCD01037681;AGCD01037682;AGCD01037683;AGCD01037684;GBCQ01152006;XM_005391219;XM_005391220 XP_005391276;XP_005391277 MODEL 8848014 protein-coding Calhm1 calcium homeostasis modulator 1 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); identical protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN ATP export (ortholog); ATP transport (ortholog); monoatomic cation transport (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955485 7102059 7105396 + 102005266 AGCD01058635;XM_005403805 XP_005403862 MODEL 9019509 protein-coding Jph1 junctophilin 1 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN muscle organ development (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease axonal type 2K (ortholog); congenital myopathy (ortholog); congenital myopathy 25 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); junctional membrane complex (ortholog) NW_004955444 6108312 6176430 + 102019445 AGCD01038851;AGCD01038852;AGCD01038853;AGCD01038854;GBDF01277952;GBDK01318636;XM_013518218;XM_013518219;XM_013518220 XP_013373672;XP_013373673;XP_013373674 MODEL 8934033 protein-coding Fdps farnesyl diphosphate synthase ENCODES a protein that exhibits (2E,6E)-farnesyl diphosphate synthase activity (ortholog); dimethylallyltranstransferase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cholesterol biosynthetic process (ortholog); farnesyl diphosphate biosynthetic process, mevalonate pathway (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); peroxisome (ortholog) NW_004955545 1757090 1765028 + 102007154 AGCD01071869;GBDF01119739;XM_005411604;XM_005411605 XP_005411661;XP_005411662 MODEL 8862293 protein-coding Kcns2 potassium voltage-gated channel modifier subfamily S member 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of potassium ion transmembrane transport (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955417 14076494 14081556 + 102010803 AGCD01018196;XM_005381849 XP_005381906 MODEL 8745713 protein-coding Cmtm5 CKLF like MARVEL transmembrane domain containing 5 INVOLVED IN negative regulation of myoblast differentiation (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog) NW_004955409 36957584 36960534 - 102020221 AGCD01010484;GBBH01040959;XM_005377076 XP_005377133 MODEL 8862045 protein-coding Adck5 aarF domain containing kinase 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955454 3006851 3024430 + 102004555 AGCD01045047;AGCD01045048;GBDI01295068;XM_005395881;XM_005395882;XM_013520177 XP_005395938;XP_005395939;XP_013375631 MODEL 39134216 misc_rna 7SK 7SK RNA 8783807 protein-coding LOC102021880 olfactory receptor 1J4-like NW_004955419 5304875 5305914 - 102021880 AGCD01019801;XM_005382919 XP_005382976 MODEL 8975897 protein-coding Cep55 centrosomal protein 55 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cranial skeletal system development (ortholog); establishment of protein localization (ortholog); midbody abscission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955507 2384 25105 + 102028113 AGCD01065457;GBDF01088210;XM_005407513;XM_005407514 XP_005407570;XP_005407571 MODEL 8777159 protein-coding Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein phosphatase 2A binding (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to hypoxia (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955463 13702434 13720875 + 102018576 AGCD01049885;GBBH01185303;XM_005398430 XP_005398487 MODEL 8927383 protein-coding Grin2a glutamate ionotropic receptor NMDA type subunit 2A ENCODES a protein that exhibits ATPase binding (ortholog); calcium channel activity (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN action potential (ortholog); auditory behavior (ortholog); calcium ion transmembrane import into cytosol (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955442 8171114 8565187 + 102013012 AGCD01037641;AGCD01037642;AGCD01037643;AGCD01037644;AGCD01037645;AGCD01037646;AGCD01037647;XM_005391203 XP_005391260 MODEL 8835364 protein-coding Alpk2 alpha kinase 2 INVOLVED IN cardiac muscle cell development (ortholog); epicardium morphogenesis (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955402 42749005 42871756 - 102010536 AGCD01001045;AGCD01001046;AGCD01001047;AGCD01001048;AGCD01001049;AGCD01001050;GBCB01023001;XM_005372989;XM_013511022;XM_013511023 XP_005373046;XP_013366476;XP_013366477 MODEL 8822871 protein-coding Cd28 CD28 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); negative regulation of gene expression (ortholog); negative thymic T cell selection (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) NW_004955457 11159769 11253099 - 102022362 AGCD01046964;AGCD01046965;GBDI01383439;XM_005397015;XM_005397016 XP_005397072;XP_005397073 MODEL 9012127 protein-coding Ccdc85b coiled-coil domain containing 85B ENCODES a protein that exhibits delta-catenin binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of fat cell differentiation (ortholog); FOUND IN adherens junction (ortholog); centrosome (ortholog); nucleus (ortholog) NW_004955422 19432368 19433386 - 102023922 AGCD01023006;GBCB01019854;XM_005384443 XP_005384500 MODEL 8982069 protein-coding Commd10 COMM domain containing 10 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 35887995 36045085 + 102026607 AGCD01008964;AGCD01008965;AGCD01008966;AGCD01008967;AGCD01008968;AGCD01008969;GBDI01256112;XM_005376533;XM_005376534;XM_005376535;XM_005376536 XP_005376590;XP_005376591;XP_005376592;XP_005376593 MODEL 8773662 protein-coding Igfbp2 insulin like growth factor binding protein 2 ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); female pregnancy (ortholog); osteoblast differentiation (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); contact dermatitis (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular region (ortholog) NW_004955453 16556873 16584737 - 102022252 AGCD01044905;AGCD01044906;AGCD01044907;GBCQ01008031;GBDI01223674;XM_013519997 XP_013375451 MODEL 8771236 protein-coding Lkaaear1 LKAAEAR motif containing 1 NW_004955528 175380 179265 + 102022957 AGCD01069513;GBDF01051163;XM_005409905;XM_013507519;XM_013507520;XM_013507521;XM_013507522 XP_005409962;XP_013362973;XP_013362974;XP_013362975;XP_013362976 MODEL 8989824 protein-coding LOC102004273 translation initiation factor IF-2 NW_004955474 427580 429704 + 102004273 AGCD01054218;GBBH01209537;XM_005401303 XP_005401360 MODEL 39131888 rrna 5S_rRNA 5S ribosomal RNA 8775089 protein-coding Cbarp CACN subunit beta associated regulatory protein ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport (ortholog); negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of voltage-gated calcium channel activity (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN growth cone (ortholog); plasma membrane (ortholog); secretory granule (ortholog) NW_004955495 6671719 6678338 + 102010500 AGCD01062088;GBDF01261682;GBDF01261683;XM_005405990 XP_005406047 MODEL 8861374 pseudo LOC102006775 tRNA methyltransferase 10 homolog A pseudogene NW_004955418 23030539 23031447 + 102006775 AGCD01019297 MODEL 9020712 protein-coding LOC102008598 keratin-associated protein 10-7-like NW_004955407 41534110 41537176 - 102008598 AGCD01007870;XM_013505446 XP_013360900 MODEL 39133821 misc_rna 7SK 7SK RNA 10110829 protein-coding LOC106149963 translation initiation factor IF-2-like NW_004955458 11162068 11162601 - 106149963 AGCD01047726;GBDF01170947;GBDI01387074;XM_013520921 XP_013376375 MODEL 8744344 protein-coding Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); CTPase activity (ortholog); GTPase activity (ortholog); INVOLVED IN CTP catabolic process (ortholog); GTP metabolic process (ortholog); nucleobase-containing small molecule catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) NW_004955507 5552788 5594911 + 102016297 AGCD01065679;AGCD01065680;GBDF01113293;XM_005407671 XP_005407728 MODEL 8871233 pseudo LOC102011727 GTP:AMP phosphotransferase AK3, mitochondrial-like NW_004955404 141224 156690 - 102011727 AGCD01003197 MODEL 8897145 pseudo LOC102009743 tubulin alpha-3E chain pseudogene NW_004955429 3059738 3060342 - 102009743 AGCD01028454 MODEL 39133956 misc_rna 7SK 7SK RNA 8950981 protein-coding Chek1 checkpoint kinase 1 ENCODES a protein that exhibits histone H3T11 kinase activity (ortholog); protein domain specific binding (ortholog); protein kinase activity (ortholog); INVOLVED IN apoptotic process involved in development (ortholog); cellular response to caffeine (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN G2/M DNA damage checkpoint pathway; p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); endometrial cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955412 26627606 26650554 + 102021953 AGCD01013204;GBDF01278392;XM_005378464 XP_005378521 MODEL 8851175 protein-coding Gfra4 GDNF family receptor alpha 4 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); INVOLVED IN glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of ossification (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955415 14513183 14514140 - 102027968 AGCD01016299;GBDI01221583;GBDJ01047888;XM_013512301 XP_013367755 MODEL 39131756 rrna 5S_rRNA 5S ribosomal RNA 9034290 protein-coding Agrp agouti related neuropeptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); receptor antagonist activity (ortholog); INVOLVED IN adult feeding behavior (ortholog); circadian rhythm (ortholog); eating behavior (ortholog); PARTICIPATES IN altered melanocortin system pathway; melanocortin system pathway; obesity pathway; ASSOCIATED WITH Hyperphagia (ortholog); obesity (ortholog); thymoma (ortholog); FOUND IN extracellular region (ortholog); Golgi lumen (ortholog); neuronal cell body (ortholog) NW_004955484 9165120 9166789 + 102030198 AGCD01058412;XM_005403647 XP_005403704 MODEL 8773973 protein-coding LOC102012894 A-kinase anchor protein 17B-like NW_004955534 648006 696921 + 102012894 AGCD01070461;AGCD01070462;AGCD01070463;AGCD01070464;AGCD01070465;AGCD01070466;AGCD01070467;GBBH01217459;XM_005410447;XM_005410448 XP_005410504;XP_005410505 MODEL 8717204 protein-coding Cdk15 cyclin dependent kinase 15 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); PARTICIPATES IN Wnt signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955457 12878736 12966434 - 102010553 AGCD01047031;AGCD01047032;AGCD01047033;GBDI01384668;XM_005397066 XP_005397123 MODEL 8901744 protein-coding Jph2 junctophilin 2 ENCODES a protein that exhibits phosphatidic acid binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); regulation of cardiac muscle tissue development (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); cervical cancer (ortholog); dilated cardiomyopathy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); junctional membrane complex (ortholog); membrane (ortholog) NW_004955445 13117312 13190061 + 102004866 AGCD01039767;AGCD01039768;AGCD01039769;AGCD01039770;GBCB01004208;GBCB01068302;XM_013518286 XP_013373740 MODEL 8752224 ncrna LOC102005678 uncharacterized LOC102005678 NW_004955461 3800451 3869319 - 102005678 AGCD01048855;GBDF01224739;XR_001236555;XR_263076;XR_263077 MODEL 9015682 ncrna LOC102010530 uncharacterized LOC102010530 NW_004955446 355157 517018 + 102010530 AGCD01039940;AGCD01039941;AGCD01039942;AGCD01039943;AGCD01039944;GBDF01235331;XR_001235683;XR_262362 MODEL 8790007 protein-coding Aqp9 aquaporin 9 ENCODES a protein that exhibits channel activity (ortholog); glycerol channel activity (ortholog); hydrogen peroxide channel activity (ortholog); INVOLVED IN amine transport (ortholog); canalicular bile acid transport (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Arsenic Poisoning (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955450 16253706 16346602 - 102017410 AGCD01042834;AGCD01042835;AGCD01042836;AGCD01042837;AGCD01042838;AGCD01042839;AGCD01042840;GBDF01044252;XM_005393841;XM_005393842;XM_005393843;XM_013518820 XP_005393898;XP_005393899;XP_005393900;XP_013374274 MODEL 8904815 protein-coding Inca1 inhibitor of CDK, cyclin A1 interacting protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); positive regulation of apoptotic signaling pathway (ortholog); ASSOCIATED WITH stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955467 10391957 10397212 - 102025339 AGCD01051562;GBCB01087285;GBDJ01290751;XM_013522077 XP_013377531 MODEL 8999023 protein-coding Htr2b 5-hydroxytryptamine receptor 2B ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cardiac muscle hypertrophy (ortholog); cellular response to amine stimulus (ortholog); ASSOCIATED WITH brain infarction (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); G protein-coupled serotonin receptor complex (ortholog) NW_004955453 4352278 4367807 + 102023428 AGCD01044686;GBDJ01237410;XM_005395400;XM_005395401;XM_005395402;XM_013519961 XP_005395457;XP_005395458;XP_005395459;XP_013375415 MODEL 8999814 protein-coding Grin2b glutamate ionotropic receptor NMDA type subunit 2B ENCODES a protein that exhibits beta-catenin binding (ortholog); calcium channel activity (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN action potential (ortholog); associative learning (ortholog); auditory behavior (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; excitatory synaptic transmission pathway; long term potentiation; ASSOCIATED WITH Abnormal Reflexes (ortholog); acne (ortholog); alcohol use disorder (ortholog); FOUND IN apical dendrite (ortholog); cell surface (ortholog); ciliary tip (ortholog) NW_004955413 10358931 10780004 - 102023457 AGCD01013930;AGCD01013931;AGCD01013932;AGCD01013933;AGCD01013934;AGCD01013935;AGCD01013936;AGCD01013937;GBDF01262737;XM_005378984;XM_005378985 XP_005379041;XP_005379042 MODEL 8832245 protein-coding Cep57 centrosomal protein 57 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); protein homooligomerization (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 638718 693837 + 102010464 AGCD01012492;AGCD01012493;AGCD01012494;GBCB01111211;XM_013511046;XM_013511047;XM_013511048 XP_013366500;XP_013366501;XP_013366502 MODEL 8718979 protein-coding Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); misfolded protein binding (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); positive regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955421 8196631 8225561 - 102029754 AGCD01021799;AGCD01021800;GBDI01139845;GBDK01133751;XM_005383919;XM_013513728 XP_005383976;XP_013369182 MODEL 8721786 pseudo LOC102011286 mitochondrial import inner membrane translocase subunit Tim9 pseudogene NW_004955410 11964895 11965083 - 102011286 AGCD01010838 MODEL 8715297 pseudo LOC102004631 quinone oxidoreductase-like protein 2 NW_004955432 19214738 19226859 - 102004631 AGCD01031171;AGCD01031172;AGCD01031173;AGCD01031174 MODEL 8736565 pseudo LOC102017795 5-azacytidine-induced protein 2 pseudogene NW_004955503 1186824 1187899 + 102017795 AGCD01064558 MODEL 8747102 protein-coding Ccdc85c coiled-coil domain containing 85C INVOLVED IN cell population proliferation (ortholog); cerebral cortex development (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); cell junction (ortholog) NW_004955438 20851085 20909512 - 102017060 AGCD01035524;GBBH01164384;GBDI01220531;XM_005390452 XP_005390509 MODEL 8911676 protein-coding Dlat dihydrolipoamide S-acetyltransferase ENCODES a protein that exhibits acetyltransferase activity (ortholog); dihydrolipoyllysine-residue acetyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN pyruvate catabolic process (ortholog); pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH Athetosis (ortholog); brain disease (ortholog); cerebral palsy (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) NW_004955412 13718091 13746220 + 102026618 AGCD01012844;GBDF01122953;XM_005378107 XP_005378164 MODEL 8800933 protein-coding Ckap2l cytoskeleton associated protein 2 like INVOLVED IN cell division (ortholog); chromosome segregation (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Filippi syndrome (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); microtubule cytoskeleton (ortholog); mitotic spindle (ortholog) NW_004955470 1552279 1581261 + 102023579 AGCD01052647;AGCD01052648;GBCB01105157;GBDF01087147;XM_013522857 XP_013378311 MODEL 8974723 ncrna LOC102009353 uncharacterized LOC102009353 NW_004955408 30404465 30505925 + 102009353 AGCD01008807;AGCD01008808;AGCD01008809;GBDI01286730;XR_001231749;XR_001231750;XR_259727 MODEL 8970740 protein-coding LOC102008248 retinal dehydrogenase 1 NW_004955512 5877696 5918693 + 102008248 AGCD01066780;GBCQ01010586;GBDI01006910;XM_013506548 XP_013362002 MODEL 8763433 pseudo LOC102003918 stress-induced-phosphoprotein 1-like NW_004955447 5714882 5718387 - 102003918 AGCD01040769 MODEL 8719140 pseudo LOC102007118 casein kinase I isoform alpha pseudogene NW_004955416 10129649 10130798 + 102007118 AGCD01017109 MODEL 8703582 protein-coding LOC102006777 olfactory receptor 2G6 NW_004955418 29618805 29621581 - 102006777 AGCD01019475;XM_005382357 XP_005382414 MODEL 8988747 protein-coding Cmtm6 CKLF like MARVEL transmembrane domain containing 6 INVOLVED IN camera-type eye development (ortholog); corneal epithelial cell differentiation (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN early endosome membrane (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) NW_004955430 23845977 23866408 - 102026777 AGCD01029843;GBBH01065233;GBCQ01038732;XM_005387530 XP_005387587 MODEL 39134217 misc_rna 7SK 7SK RNA 8731364 protein-coding Acly ATP citrate lyase ENCODES a protein that exhibits ATP citrate synthase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA metabolic process (ortholog); acyl-CoA biosynthetic process (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congestive heart failure (ortholog); FOUND IN ATP-dependent citrate lyase complex (ortholog); cytosol (ortholog) NW_004955451 16058916 16091831 - 102008173 AGCD01043651;AGCD01043652;GBCE01052163;XM_005394422;XM_005394423 XP_005394479;XP_005394480 MODEL 8992801 pseudo LOC102021882 protein RUFY3 pseudogene NW_004955420 9999064 10000427 + 102021882 AGCD01020772 MODEL 8852822 protein-coding Fdx1 ferredoxin 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); cholesterol monooxygenase (side-chain-cleaving) activity (ortholog); electron transfer activity (ortholog); INVOLVED IN adrenal gland development (ortholog); cellular response to cAMP (ortholog); cellular response to epinephrine stimulus (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955412 12280900 12312930 + 102014654 AGCD01012816;AGCD01012817;AGCD01012818;GBBH01064220;GBDF01156762;XM_013511103 XP_013366557 MODEL 39133822 misc_rna 7SK 7SK RNA 8994071 protein-coding Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); translation repressor activity (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); memory (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); neuronal ribonucleoprotein granule (ortholog); nucleus (ortholog) NW_004955437 20844750 20879874 - 102013760 AGCD01034888;AGCD01034889;AGCD01034890;GBDI01072458;XM_005390059;XM_013517009 XP_005390116;XP_013372463 MODEL 9016293 protein-coding Cd2ap CD2 associated protein ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin filament polymerization (ortholog); adipose tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin filament (ortholog); anchoring junction (ortholog); axon (ortholog) NW_004955437 12005399 12087014 + 102021916 AGCD01034594;AGCD01034595;AGCD01034596;AGCD01034597;GBBH01026222;GBDF01156845;XM_013517016 XP_013372470 MODEL 10243474 ncrna LOC106149964 uncharacterized LOC106149964 NW_004955402 8012332 8032846 + 106149964 AGCD01000189;GBDF01059519;XR_001236462 MODEL 8909051 protein-coding Ano10 anoctamin 10 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); autosomal recessive cerebellar ataxia (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 27572561 27682099 + 102014252 AGCD01021456;AGCD01021457;GBDF01079973;XM_005383486 XP_005383543 MODEL 8863249 protein-coding Alpk3 alpha kinase 3 INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiac arrest (ortholog); FOUND IN nucleus (ortholog) NW_004955416 14279831 14322836 - 102010256 AGCD01017249;AGCD01017250;AGCD01017251;AGCD01017252;AGCD01017253;GBCB01004832;XM_005381489;XM_005381491 XP_005381546;XP_005381548 MODEL 8981103 protein-coding Commd2 COMM domain containing 2 ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955448 948642 964932 - 102021291 AGCD01041245;GBCE01053949;XM_005393002;XM_005393003;XM_013518682;XM_013518683 XP_005393059;XP_005393060;XP_013374136;XP_013374137 MODEL 8717722 protein-coding Calhm2 calcium homeostasis modulator family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN ATP export (ortholog); calcium ion import (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); dementia (ortholog); depressive disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955485 7106926 7111745 + 102004935 AGCD01058635;GBBH01186775;XM_005403804 XP_005403861 MODEL 8773422 protein-coding Igfbp3 insulin like growth factor binding protein 3 ENCODES a protein that exhibits fibronectin binding (ortholog); insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); female pregnancy (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); heterochromatin (ortholog); insulin-like growth factor binary complex (ortholog) NW_004955456 6795560 6802147 + 102007408 AGCD01046378;GBCE01001939;GBDF01052670;XM_013520639 XP_013376093 MODEL 8897463 protein-coding Llgl1 LLGL scribble cell polarity complex component 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN axonogenesis (ortholog); cortical actin cytoskeleton organization (ortholog); Golgi to plasma membrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); cortical actin cytoskeleton (ortholog) NW_004955478 11075399 11089818 - 102021006 AGCD01056158;AGCD01056159;GBBH01126920;GBDJ01224920;XM_005402281 XP_005402338 MODEL 8878475 ncrna LOC102004276 uncharacterized LOC102004276 NW_004955476 10952695 10958599 + 102004276 AGCD01055432;AGCD01055433;GBDF01093785;XR_001230793;XR_263644 MODEL 39131890 rrna 5S_rRNA 5S ribosomal RNA 8851058 protein-coding Chek2 checkpoint kinase 2 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to bisphenol A (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); B-cell acute lymphoblastic leukemia (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); PML body (ortholog) NW_004955455 2969113 3008004 - 102022254 AGCD01045607;GBDF01014927;XM_005396164;XM_013520374;XM_013520375;XM_013520376;XM_013520377;XM_013520378;XM_013520379 XP_005396221;XP_013375828;XP_013375829;XP_013375830;XP_013375831;XP_013375832;XP_013375833 MODEL 8716577 protein-coding Gfral GDNF family receptor alpha like ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN GDF15-GFRAL signaling pathway (ortholog); negative regulation of appetite (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); ASSOCIATED WITH lymphoma (ortholog); urinary bladder cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955411 903001 952750 - 102007749 AGCD01011468;AGCD01011469;GBDF01165025;XM_005377916 XP_005377973 MODEL 8958915 protein-coding Cbfa2t2 CBFA2/RUNX1 partner transcriptional co-repressor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); intestinal epithelial cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955422 27671215 27809384 - 102027869 AGCD01023331;AGCD01023332;AGCD01023333;AGCD01023334;AGCD01023335;GBCB01131430;XM_005384841;XM_005384842;XM_013514210 XP_005384898;XP_005384899;XP_013369664 MODEL 8953516 pseudo LOC102008599 ATP synthase F(0) complex subunit C2, mitochondrial pseudogene NW_004955408 4475183 4478730 - 102008599 AGCD01008113 MODEL 8950801 protein-coding Adcy1 adenylate cyclase 1 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN axonogenesis (ortholog); cAMP biosynthetic process (ortholog); circadian rhythm (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 44 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon hillock (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955456 6833992 6930990 - 102013052 AGCD01046378;AGCD01046379;AGCD01046380;AGCD01046381;GBCB01061631;GBCB01061632;XM_005396644 XP_005396701 MODEL 8904119 protein-coding Atrx ATRX chromatin remodeler ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); chromatin binding (ortholog); chromo shadow domain binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromosome, subtelomeric region (ortholog); chromosome, telomeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955557 947368 1252701 - 102019208 AGCD01073270;AGCD01073271;AGCD01073272;AGCD01073273;AGCD01073274;AGCD01073275;AGCD01073276;AGCD01073277;AGCD01073278;AGCD01073279;AGCD01073280;AGCD01073281;AGCD01073282;AGCD01073283;GBDK01278909;XM_005412622;XM_013508821;XM_013508822;XM_013508823;XM_013508824;XM_013508825 XP_005412679;XP_013364275;XP_013364276;XP_013364277;XP_013364278;XP_013364279 MODEL 8705561 protein-coding Jph3 junctophilin 3 INVOLVED IN exploration behavior (ortholog); learning (ortholog); locomotion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Colorectal Neoplasms (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); junctional membrane complex (ortholog) NW_004955541 1969197 2020868 + 102027457 AGCD01071398;GBBH01037412;XM_005411005 XP_005411062 MODEL 9033717 protein-coding Kcns3 potassium voltage-gated channel modifier subfamily S member 3 ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955469 675032 727666 + 102008083 AGCD01052233;AGCD01052234;GBBH01183515;GBDK01004254;XM_005400330;XM_013522671 XP_005400387;XP_013378125 MODEL 8728967 ncrna LOC102011728 uncharacterized LOC102011728 NW_004955405 4802647 4833270 - 102011728 AGCD01004653;AGCD01004654;AGCD01004655;GBDF01208522;XR_001235207;XR_259362 MODEL 9000915 protein-coding Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); apyrase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN nucleoside diphosphate biosynthetic process (ortholog); nucleoside monophosphate biosynthetic process (ortholog); ribonucleoside diphosphate catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); microcephaly (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955513 5352843 5357671 - 102014159 AGCD01066968;GBCQ01038627;XM_005408613;XM_013506722 XP_005408670;XP_013362176 MODEL 8874235 trna Trnaa-cgc transfer RNA alanine (anticodon CGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955419;NW_004955449 326792;20242611;16876672 326863;20242682;16876743 -;-;- 101978817 AGCD01020232;AGCD01042230;AGCD01057606 MODEL 8817877 protein-coding Incenp inner centromere protein ENCODES a protein that exhibits molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN central element (ortholog); chromocenter (ortholog); chromosome passenger complex (ortholog) NW_004955511 5705948 5724167 - 102006057 AGCD01066576;AGCD01066577;GBBH01050425;XM_005408127;XM_005408128 XP_005408184;XP_005408185 MODEL 8961855 protein-coding LOC102009744 lipocalin-1-like NW_004955513 2591903 2597295 + 102009744 AGCD01066882;GBBH01003724;XM_005408420 XP_005408477 MODEL 8782076 ncrna LOC102011289 uncharacterized LOC102011289 NW_004955411 10258447 10278073 - 102011289 AGCD01011777;GBDF01225406;XR_001232804 MODEL 8828854 protein-coding Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); positive regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955422 26243034 26271849 + 102015325 AGCD01023283;AGCD01023284;GBDI01078947;XM_005384804 XP_005384861 MODEL 9065482 protein-coding Abca1 ATP binding cassette subfamily A member 1 ENCODES a protein that exhibits apolipoprotein A-I binding (ortholog); apolipoprotein A-I receptor activity (ortholog); apolipoprotein binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cholesterol (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN altered reverse cholesterol transport pathway; retinol metabolic pathway; reverse cholesterol transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955419 21553863 21681626 + 102029865 AGCD01020281;GBBH01213940;XM_005382782;XM_005382783 XP_005382839;XP_005382840 MODEL 39131757 rrna 5S_rRNA 5S ribosomal RNA 9036914 pseudo LOC102009355 transcription elongation factor B polypeptide 1 pseudogene NW_004955459 15151409 15153569 + 102009355 AGCD01048312 MODEL 8832187 pseudo LOC102008250 cytochrome c oxidase assembly protein COX16 homolog, mitochondrial pseudogene NW_004955434 4045849 4046615 - 102008250 AGCD01032154;XM_005388576;XM_005388577 MODEL 9046023 pseudo LOC102012900 probable G-protein coupled receptor 160 NW_004955440 2492344 2496582 - 102012900 AGCD01036208 MODEL 8861078 protein-coding Cdk16 cyclin dependent kinase 16 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN exocytosis (ortholog); growth hormone secretion (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955516 860474 873338 - 102019309 AGCD01067404;GBBH01091108;XM_005408951;XM_005408954;XM_013506917;XM_013506918;XM_013506919;XM_013506920;XM_013506921;XM_013506922 XP_005409008;XP_005409011;XP_013362371;XP_013362372;XP_013362373;XP_013362374;XP_013362375;XP_013362376 MODEL 8934545 pseudo LOC102003922 tubulin polyglutamylase TTLL4 pseudogene NW_004955585 115408 119336 - 102003922 AGCD01075993 MODEL 9066134 ncrna LOC102005685 uncharacterized LOC102005685 NW_004955412 2045158 2062851 - 102005685 AGCD01012534;GBDF01262267;XR_259966 MODEL 8849525 protein-coding Htr2c 5-hydroxytryptamine receptor 2C ENCODES a protein that exhibits 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding (ortholog); G protein-coupled serotonin receptor activity (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); behavioral fear response (ortholog); behavioral response to nicotine (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); G protein-coupled serotonin receptor complex (ortholog) NW_004955490 912615 1126347 - 102027753 AGCD01060097;AGCD01060098;AGCD01060099;AGCD01060100;AGCD01060101;XM_005404627 XP_005404684 MODEL 8910161 protein-coding Fdx2 ferredoxin 2 ENCODES a protein that exhibits electron transfer activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH mitochondrial myopathy (ortholog); Multiple mitochondrial dysfunctions syndrome 8 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955495 1590493 1594760 - 102003252 AGCD01061704;GBBH01143656;XM_005405590 XP_005405647 MODEL 8813518 protein-coding Ess2 ess-2 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); nervous system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); DiGeorge syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog) NW_004955442 18829037 18840542 + 102012369 AGCD01038021;AGCD01038022;GBDF01125719;XM_005391788 XP_005391845 MODEL 9065013 protein-coding Grin2c glutamate ionotropic receptor NMDA type subunit 2C ENCODES a protein that exhibits glutamate binding (ortholog); glutamate-gated receptor activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); directional locomotion (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol withdrawal syndrome (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); NMDA selective glutamate receptor complex (ortholog); plasma membrane (ortholog) NW_004955553 1729431 1746754 - 102004754 AGCD01072897;AGCD01072898;AGCD01072899;GBDJ01408115;XM_013508612 XP_013364066 MODEL 8901695 protein-coding Ccdc86 coiled-coil domain containing 86 INVOLVED IN chromosome segregation (ortholog); mitotic nuclear division (ortholog); ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955511 5533895 5535984 + 102030655 AGCD01066567;GBCQ01128476;GBDF01162536;XM_013506511 XP_013361965 MODEL 9031652 pseudo LOC102004632 protein DBF4 homolog A pseudogene NW_004955520 4533977 4536441 + 102004632 AGCD01068120 MODEL 8703873 protein-coding Dlc1 DLC1 Rho GTPase activating protein ENCODES a protein that exhibits GTPase activator activity (ortholog); phospholipase binding (ortholog); phospholipase C activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to insulin stimulus (ortholog); focal adhesion assembly (ortholog); PARTICIPATES IN Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); cervical cancer (ortholog); FOUND IN actin filament (ortholog); caveola (ortholog); cortical actin cytoskeleton (ortholog) NW_004955463 3599415 3981187 + 102014429 AGCD01049591;AGCD01049592;AGCD01049593;AGCD01049594;AGCD01049595;AGCD01049596;AGCD01049597;AGCD01049598;AGCD01049599;AGCD01049600;GBCE01115032;XM_005398346;XM_013521500;XM_013521501;XM_013521502 XP_005398403;XP_013376954;XP_013376955;XP_013376956 MODEL 8954947 protein-coding Inf2 inverted formin 2 INVOLVED IN actin nucleation (ortholog); gene expression (ortholog); regulation of cellular component size (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955538 3154670 3176510 + 102025725 AGCD01071151;AGCD01071152;GBDK01240114;XM_005410836;XM_005410837;XM_005410838 XP_005410893;XP_005410894;XP_005410895 MODEL 8809632 protein-coding Alpl alkaline phosphatase, biomineralization associated ENCODES a protein that exhibits ADP phosphatase activity (ortholog); alkaline phosphatase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion homeostasis (ortholog); cementum mineralization (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH adult hypophosphatasia (ortholog); Alveolar Bone Loss (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular matrix (ortholog); extracellular membrane-bounded organelle (ortholog); extracellular region (ortholog) NW_004955452 1820212 1873877 + 102029036 AGCD01043868;AGCD01043869;GBCE01004528;XM_013519688;XM_013519689;XM_013519690 XP_013375142;XP_013375143;XP_013375144 MODEL 8886161 pseudo LOC102010531 60S ribosomal protein L37 pseudogene NW_004955446 2571700 2571990 + 102010531 AGCD01039985 MODEL 8907597 pseudo LOC102006780 serine/threonine-protein phosphatase CPPED1 pseudogene NW_004955484 8142928 8153116 + 102006780 AGCD01058371 MODEL 39134218 misc_rna 7SK 7SK RNA 8706130 protein-coding Abca12 ATP binding cassette subfamily A member 12 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); ATPase-coupled intramembrane lipid carrier activity (ortholog); lipid carrier activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); ceramide transport (ortholog); corneocyte desquamation (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog); autosomal recessive congenital ichthyosis 4A (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); epidermal lamellar body (ortholog) NW_004955457 885941 1062713 + 102020422 AGCD01046716;AGCD01046717;AGCD01046718;GBCQ01127755;XM_013520777 XP_013376231 MODEL 39133823 misc_rna 7SK 7SK RNA 39131360 protein-coding EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3 8822344 protein-coding Acmsd aminocarboxymuconate semialdehyde decarboxylase ENCODES a protein that exhibits aminocarboxymuconate-semialdehyde decarboxylase activity (ortholog); carboxy-lyase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); negative regulation of quinolinate biosynthetic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); kidney failure (ortholog); Puromycin Aminonucleoside Nephrosis (ortholog); FOUND IN cytosol (ortholog) NW_004955440 2348434 2412706 + 102003806 AGCD01036206;AGCD01036207;GBCQ01033145;XM_005390746;XM_005390748;XM_005390749;XM_013517510;XM_013517511 XP_005390803;XP_005390805;XP_005390806;XP_013372964;XP_013372965 MODEL 8850508 protein-coding Aqr aquarius intron-binding spliceosomal factor ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 2214990 2304924 - 102004161 AGCD01016851;AGCD01016852;AGCD01016853;GBBH01187407;GBCE01117658;XM_013512621 XP_013368075 MODEL 39133957 misc_rna 7SK 7SK RNA 9021224 protein-coding Cd2bp2 CD2 cytoplasmic tail binding protein 2 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955493 7281073 7283879 - 102011878 AGCD01061175;GBCQ01036195;XM_005405248;XM_005405249 XP_005405305;XP_005405306 MODEL 8770430 protein-coding Cep57l1 centrosomal protein 57 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955411 34140830 34213086 + 102014122 AGCD01012382;AGCD01012383;AGCD01012384;AGCD01012385;AGCD01012386;AGCD01012387;AGCD01012388;AGCD01012389;GBDF01051594;XM_005377851;XM_005377852;XM_005377853;XM_005377854;XM_005377855 XP_005377908;XP_005377909;XP_005377910;XP_005377911;XP_005377912 MODEL 8923359 protein-coding Ano2 anoctamin 2 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN chloride transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); non-motile cilium (ortholog); plasma membrane (ortholog) NW_004955413 3333275 3650255 - 102010569 AGCD01013569;AGCD01013570;AGCD01013571;AGCD01013572;AGCD01013573;AGCD01013574;AGCD01013575;AGCD01013576;AGCD01013577;AGCD01013578;GBDF01207637;XM_013511280 XP_013366734 MODEL 10379278 ncrna LOC106149965 uncharacterized LOC106149965 NW_004955458 9802872 9807999 + 106149965 AGCD01047662;GBCE01168777;XR_001236458;XR_001236459 MODEL 8983621 protein-coding Calhm3 calcium homeostasis modulator 3 ENCODES a protein that exhibits voltage-gated channel activity (ortholog); voltage-gated monoatomic ion channel activity (ortholog); INVOLVED IN ATP export (ortholog); ATP transport (ortholog); protein heterooligomerization (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955485 7089268 7092968 + 102003970 AGCD01058634;GBBH01110679;XM_005403802;XM_005403803 XP_005403859;XP_005403860 MODEL 9051520 protein-coding Grin2d glutamate ionotropic receptor NMDA type subunit 2D ENCODES a protein that exhibits glutamate binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); glutamate-gated receptor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); calcium ion transmembrane import into cytosol (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH alcohol withdrawal syndrome (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); NMDA selective glutamate receptor complex (ortholog) NW_004955559 2042723 2080706 - 102022027 AGCD01073688;AGCD01073689;AGCD01073690;AGCD01073691;GBCB01120888;GBDF01281630;XM_013508950 XP_013364404 MODEL 8849926 protein-coding Agt angiotensinogen ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); aldosterone secretion (ortholog); angiotensin-activated signaling pathway (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; angiotensin II signaling pathway; angiotensin II signaling pathway via AT1 receptor; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Albuminuria (ortholog); alcoholic cardiomyopathy (ortholog); FOUND IN extracellular region (ortholog); mitochondrion (ortholog) NW_004955492 7863662 7874863 + 102012441 AGCD01060805;GBCQ01167112;XM_005404990 XP_005405047 MODEL 8816288 protein-coding Llgl2 LLGL scribble cell polarity complex component 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); establishment or maintenance of polarity of embryonic epithelium (ortholog); L-leucine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955553 2377640 2415152 + 102030244 AGCD01072935;GBDJ01082430;XM_005412308;XM_013508660;XM_013508661;XM_013508662 XP_005412365;XP_013364114;XP_013364115;XP_013364116 MODEL 39131891 rrna 5S_rRNA 5S ribosomal RNA 8891422 ncrna LOC102011290 uncharacterized LOC102011290 NW_004955464 5744512 5747225 + 102011290 AGCD01050012;AGCD01050013;GBDF01041677;XR_263200 MODEL 9050992 protein-coding Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN granulocyte differentiation (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955541 2724369 2777540 - 102006822 AGCD01071423;AGCD01071424;GBDK01281937;XM_005411026;XM_005411029;XM_005411030;XM_013508004;XM_013508006 XP_005411083;XP_005411086;XP_005411087;XP_013363458;XP_013363460 MODEL 8784682 protein-coding Cmtm7 CKLF like MARVEL transmembrane domain containing 7 INVOLVED IN B cell activation (ortholog); B-1a B cell differentiation (ortholog); gene expression (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955430 23752910 23803754 + 102025712 AGCD01029837;AGCD01029838;GBDI01117680;XM_005387527;XM_005387528 XP_005387584;XP_005387585 MODEL 8924199 protein-coding LOC102021884 zinc finger and SCAN domain-containing protein 2-like NW_004955491 5000354 5007435 + 102021884 AGCD01060466;GBDK01264771;XM_005404781;XM_005404782;XM_005404783;XM_005404784;XM_005404785;XM_005404786;XM_013504603;XM_013504604 XP_005404838;XP_005404839;XP_005404840;XP_005404841;XP_005404842;XP_005404843;XP_013360057;XP_013360058 MODEL 8833038 protein-coding LOC102012901 general transcription factor 3C polypeptide 6-like NW_004955441 6322077 6323436 - 102012901 AGCD01036912;XM_013517515 XP_013372969 MODEL 8808022 protein-coding Gfus GDP-L-fucose synthase ENCODES a protein that exhibits GDP-L-fucose synthase activity (ortholog); GDP-mannose 3,5-epimerase activity (ortholog); identical protein binding (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); positive regulation of endothelial cell migration (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955454 2313172 2317829 - 102007733 AGCD01045015;GBDI01063386;XM_005395789;XM_005395790;XM_013520039 XP_005395846;XP_005395847;XP_013375493 MODEL 8858533 protein-coding Cdk17 cyclin dependent kinase 17 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955405 32565193 32608388 - 102008814 AGCD01005334;GBDF01190095;GBDF01190097;XM_013518508 XP_013373962 MODEL 40834593 protein-coding C11orf80 chromosome 11 open reading frame 80 9066213 ncrna LOC102010532 uncharacterized LOC102010532 NW_004955447 16858642 16860472 - 102010532 AGCD01041110;GBDF01286927;XR_001235700 MODEL 8829452 protein-coding Atxn1 ataxin 1 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); poly(G) binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); brain development (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear inclusion body (ortholog) NW_004955483 9159877 9559453 + 102026869 AGCD01057857;AGCD01057858;AGCD01057859;AGCD01057860;AGCD01057861;GBDK01169335;XM_013503811;XM_013503812;XM_013503813;XM_013503814;XM_013503815;XM_013503816;XM_013503817;XR_001231022;XR_001231023 XP_013359265;XP_013359266;XP_013359267;XP_013359268;XP_013359269;XP_013359270;XP_013359271 MODEL 8753322 trna Trnaa-ggc transfer RNA alanine (anticodon GGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955403;NW_004955407;NW_004955423;NW_004955421;NW_004955454 2513557;3403311;23453225;6344906;5926569 2513628;3403382;23453296;6344977;5926641 +;+;+;+;- 101978815 AGCD01001737;AGCD01006858;AGCD01021736;AGCD01024005;AGCD01045196 MODEL 8739096 protein-coding Kcnt1 potassium sodium-activated channel subfamily T member 1 ENCODES a protein that exhibits chloride-activated potassium channel activity (ortholog); intracellular sodium-activated potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH asthma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN plasma membrane (ortholog); postsynaptic density membrane (ortholog) NW_004955513 4712772 4765657 - 102019835 AGCD01066938;AGCD01066939;GBDK01177445;XM_005408541;XM_005408542;XM_005408543;XM_005408544;XM_013506735;XM_013506736;XM_013506737;XM_013506738;XM_013506739 XP_005408598;XP_005408599;XP_005408600;XP_005408601;XP_013362189;XP_013362190;XP_013362191;XP_013362192;XP_013362193 MODEL 8838524 protein-coding Ckap4 cytoskeleton associated protein 4 ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955405 40277082 40279486 - 102020196 AGCD01005510;GBCE01098483;GBDI01222143;XM_013519036 XP_013374490 MODEL 8888627 ncrna LOC102009749 uncharacterized LOC102009749 NW_004955519 2189856 2320813 - 102009749 AGCD01067917;AGCD01067918;AGCD01067919;AGCD01067920;AGCD01067921;AGCD01067922;AGCD01067923;AGCD01067924;GBDK01382059;XR_001231859;XR_001231860;XR_001231861 MODEL 9009867 protein-coding Commd3 COMM domain containing 3 INVOLVED IN gene expression (ortholog); intracellular copper ion homeostasis (ortholog); response to hormone (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955429 6559824 6563701 - 102018119 AGCD01028553;GBBH01092657;GBBH01092658;XM_005386934 XP_005386991 MODEL 9051537 protein-coding Igfbp4 insulin like growth factor binding protein 4 ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); INVOLVED IN positive regulation of insulin-like growth factor receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); regulation of cell growth (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Experimental Diabetes Mellitus (ortholog); sarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955451 15027184 15029830 + 102022350 AGCD01043593;GBBH01003732;GBDJ01017128;XM_013519360 XP_013374814 MODEL 8853429 protein-coding Htr3a 5-hydroxytryptamine receptor 3A ENCODES a protein that exhibits identical protein binding (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); serotonin binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to growth factor stimulus (ortholog); positive regulation of ion transmembrane transporter activity (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); cleavage furrow (ortholog); glutamatergic synapse (ortholog) NW_004955412 15589117 15602211 + 102010883 AGCD01012882;XM_005378151;XM_005378152 XP_005378208;XP_005378209 MODEL 8927290 protein-coding Ccdc87 coiled-coil domain containing 87 INVOLVED IN positive regulation of acrosome reaction (ortholog); positive regulation of fertilization (ortholog) NW_004955422 18772869 18775548 + 102006470 AGCD01022960;GBDF01086002;XM_005384386 XP_005384443 MODEL 8835860 protein-coding Entr1 endosome associated trafficking regulator 1 INVOLVED IN endocytic recycling (ortholog); positive regulation of cilium assembly (ortholog); positive regulation of protein localization to cilium (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955513 4322002 4329479 + 102026141 AGCD01066925;AGCD01066926;GBCB01003691;GBDF01008499;XM_005408649 XP_005408706 MODEL 8962367 protein-coding Cherp calcium homeostasis endoplasmic reticulum protein ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955524 1224698 1235192 + 102029435 AGCD01068739;AGCD01068740;GBBH01142712;GBDF01005378;XM_013507227 XP_013362681 MODEL 9016485 protein-coding LOC102004635 uncharacterized LOC102004635 NW_004955524 2023272 2031552 + 102004635 AGCD01068792;GBDF01249148;XM_013507193 XP_013362647 MODEL 8877743 protein-coding Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIv (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955406 23329400 23401282 - 102005222 AGCD01006171;GBDJ01317528;XM_005375059;XM_013521605 XP_005375116;XP_013377059 MODEL 8799074 ncrna LOC102009360 uncharacterized LOC102009360 NW_004955410 29294602 29317106 + 102009360 AGCD01011281;AGCD01011282;GBCQ01057489;XR_001232714 MODEL 8817269 pseudo LOC102008251 60S ribosomal protein L17 pseudogene NW_004955523 12998 13552 + 102008251 AGCD01068430 MODEL 8699973 protein-coding Adcy10 adenylate cyclase 10 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); ATPase binding (ortholog); bicarbonate binding (ortholog); INVOLVED IN cAMP biosynthetic process (ortholog); cellular response to carbon dioxide (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); astrocyte end-foot (ortholog) NW_004955462 9196984 9278850 + 102022369 AGCD01049333;AGCD01049334;AGCD01049335;GBDF01086065;XM_013521435;XM_013521436 XP_013376889;XP_013376890 MODEL 8754794 ncrna LOC102005686 uncharacterized LOC102005686 NW_004955465 6940344 6948806 - 102005686 AGCD01050449;GBCB01122620;XR_263246 MODEL 8816373 protein-coding LOC102003924 uncharacterized LOC102003924 NW_004955402 38979252 38993934 + 102003924 AGCD01000974;GBDF01101946;NM_001371756;XM_005373171;XM_013522414 NP_001358685;XP_005373228;XP_013377868 VALIDATED 8840858 protein-coding Jph4 junctophilin 4 INVOLVED IN learning (ortholog); neuromuscular process controlling balance (ortholog); regulation of cytokine production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); melanoma (ortholog); FOUND IN dendritic shaft (ortholog); smooth endoplasmic reticulum (ortholog) NW_004955409 36785003 36795196 + 102016137 AGCD01010481;GBDI01053474;XM_005377060 XP_005377117 MODEL 8811387 protein-coding LOC102017797 uncharacterized LOC102017797 NW_004955427 10150908 10170576 - 102017797 AGCD01027128;AGCD01027129;AGCD01027130;AGCD01027131;AGCD01027132;AGCD01027133;GBDF01207976;XM_013515052 XP_013370506 MODEL 8711925 pseudo LOC102010533 olfactory receptor 2B6-like NW_004955576 1225109 1226068 - 102010533 AGCD01075364;XM_005413950 MODEL 8986771 ncrna LOC102007121 uncharacterized LOC102007121 NW_004955482 3110012 3117667 + 102007121 AGCD01057259;GBDF01304912;XR_263825 MODEL 9054832 ncrna LOC102004278 uncharacterized LOC102004278 NW_004955480 4530020 4536073 + 102004278 AGCD01056642;GBDF01146524;XR_263743 MODEL 8811458 protein-coding Fdxacb1 ferredoxin-fold anticodon binding domain containing 1 ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog) NW_004955412 13601032 13605418 - 102021326 AGCD01012842;GBDF01188626;XM_005378088 XP_005378145 MODEL 9037143 protein-coding Kcnt2 potassium sodium-activated channel subfamily T member 2 ENCODES a protein that exhibits chloride-activated potassium channel activity (ortholog); intracellular sodium-activated potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN potassium ion export across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH Arachnoid Cysts (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 33080570 33441342 - 102022160 AGCD01006462;AGCD01006463;AGCD01006464;AGCD01006465;AGCD01006466;AGCD01006467;AGCD01006468;AGCD01006469;AGCD01006470;AGCD01006471;AGCD01006472;AGCD01006473;AGCD01006474;GBCE01012269;XM_005375110;XM_005375111 XP_005375167;XP_005375168 MODEL 8902864 protein-coding LOC102008603 forkhead box protein L1 NW_004955460 8202937 8204916 + 102008603 AGCD01048513;GBDF01028920;XM_005397773 XP_005397830 MODEL 8753974 protein-coding Dld dihydrolipoamide dehydrogenase ENCODES a protein that exhibits dihydrolipoyl dehydrogenase (NADH) activity (ortholog); flavin adenine dinucleotide binding (ortholog); lipoamide binding (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN acrosomal matrix (ortholog); branched-chain alpha-ketoacid dehydrogenase complex (ortholog); cilium (ortholog) NW_004955410 12212981 12238561 + 102008070 AGCD01010846;AGCD01010847;AGCD01010848;AGCD01010849;AGCD01010850;GBCE01096063;XM_005377291;XM_013510668 XP_005377348;XP_013366122 MODEL 39131459 protein-coding GRIN2D glutamate ionotropic receptor NMDA type subunit 2D 8704678 protein-coding Llph LLP homolog, long-term synaptic facilitation factor INVOLVED IN dendrite extension (ortholog); positive regulation of dendritic spine development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955458 12785194 12791918 - 102023233 AGCD01047789;GBDF01120063;XM_005397449;XM_005397450;XM_005397451;XM_013520895 XP_005397506;XP_005397507;XP_005397508;XP_013376349 MODEL 8758778 pseudo LOC102006781 calmodulin pseudogene NW_004955420 5731109 5732180 - 102006781 AGCD01020679;XM_005383023 MODEL 39134223 misc_rna 7SK 7SK RNA 39133824 misc_rna 7SK 7SK RNA 8898926 protein-coding Abca13 ATP binding cassette subfamily A member 13 INVOLVED IN ceramide transport (ortholog); positive regulation of cholesterol transport (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); intracellular vesicle (ortholog) NW_004955456 4977504 5341259 - 102006422 AGCD01046315;AGCD01046316;AGCD01046317;AGCD01046318;AGCD01046319;AGCD01046320;AGCD01046321;AGCD01046322;AGCD01046323;AGCD01046324;AGCD01046325;AGCD01046326;AGCD01046327;GBBH01203320;XM_013520510 XP_013375964 MODEL 9032392 protein-coding LOC102011733 cytochrome b-c1 complex subunit 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955455 4013197 4015448 + 102011733 AGCD01045662;GBDF01008630;XM_005396224 XP_005396281 MODEL 8707225 pseudo LOC102012902 E3 ubiquitin-protein ligase RNF13-like NW_004955550 44557 45787 + 102012902 AGCD01072481 MODEL 8994196 protein-coding Als2 alsin Rho guanine nucleotide exchange factor ALS2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); behavioral fear response (ortholog); endosomal transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 2 (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955403 22449 104577 + 102016967 AGCD01001679;AGCD01001680;AGCD01001681;GBCQ01070450;XM_005373184;XM_005373185;XM_005373186;XM_013511695;XM_013511698 XP_005373241;XP_005373242;XP_005373243;XP_013367149;XP_013367152 MODEL 39133958 misc_rna 7SK 7SK RNA 8826553 protein-coding Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ENCODES a protein that exhibits kinase binding (ortholog); mRNA binding (ortholog); nuclear export signal receptor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); mRNA stabilization (ortholog); negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955455 5612087 5660543 - 102009460 AGCD01045743;AGCD01045744;AGCD01045745;AGCD01045746;GBDK01183925;XM_005396313;XM_005396314;XM_005396315;XM_005396316 XP_005396370;XP_005396371;XP_005396372;XP_005396373 MODEL 8805762 protein-coding Ar androgen receptor ENCODES a protein that exhibits androgen binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); animal organ formation (ortholog); cellular response to estrogen stimulus (ortholog); PARTICIPATES IN altered androgen signaling pathway; androgen signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); alcohol dependence (ortholog); alopecia (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955475 7013960 7192473 + 102012423 AGCD01054992;AGCD01054993;AGCD01054994;AGCD01054995;AGCD01054996;GBCQ01091700;XM_005401581 XP_005401638 MODEL 9050946 protein-coding Esx1 ESX homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN blood vessel development (ortholog); labyrinthine layer blood vessel development (ortholog); labyrinthine layer morphogenesis (ortholog); ASSOCIATED WITH lung cancer (ortholog); spermatogenic failure 57 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955548 1087441 1095070 - 102004647 AGCD01072356;AGCD01072357;AGCD01072358;GBDF01189839;XM_005412009 XP_005412066 MODEL 8957220 protein-coding Cd300a CD300a molecule ENCODES a protein that exhibits phosphatase binding (ortholog); phosphatidylethanolamine binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of B cell proliferation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955553 1335854 1356001 + 102009111 AGCD01072878;AGCD01072879;GBDK01277573;XM_005412236;XM_013508663 XP_005412293;XP_013364117 MODEL 8708735 protein-coding Cep63 centrosomal protein 63 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); meiotic telomere clustering (ortholog); ASSOCIATED WITH Arachnodactyly (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955501 4032281 4095990 - 102022721 AGCD01064106;AGCD01064107;AGCD01064108;AGCD01064109;AGCD01064110;AGCD01064111;GBCE01065764;XM_005406794;XM_005406795;XM_005406798;XM_013505782;XM_013505783;XM_013505785;XM_013505786;XM_013505787 XP_005406851;XP_005406852;XP_005406855;XP_013361236;XP_013361237;XP_013361239;XP_013361240;XP_013361241 MODEL 8704332 pseudo LOC102009750 H-2 class II histocompatibility antigen, E-S beta chain pseudogene NW_004955433 10616032 10617329 + 102009750 AGCD01031633 MODEL 8744291 protein-coding Ano3 anoctamin 3 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); detection of mechanical stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar hypoplasia (ortholog); FOUND IN cilium (ortholog) NW_004955476 5702888 6060545 + 102013601 AGCD01055314;AGCD01055315;AGCD01055316;AGCD01055317;AGCD01055318;AGCD01055319;AGCD01055320;AGCD01055321;AGCD01055322;GBDK01351306;XM_005401742;XM_005401743 XP_005401799;XP_005401800 MODEL 10325213 ncrna LOC106149966 uncharacterized LOC106149966 NW_004955458 9762195 9774375 + 106149966 AGCD01047662;XR_001236460 MODEL 8994246 protein-coding Htr3b 5-hydroxytryptamine receptor 3B ENCODES a protein that exhibits serotonin-gated monoatomic cation channel activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); positive regulation of ion transmembrane transporter activity (ortholog); serotonin receptor signaling pathway (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); cervical cancer (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); neuronal cell body (ortholog) NW_004955412 15524854 15569638 + 102017211 AGCD01012879;AGCD01012880;AGCD01012881;AGCD01012882;GBDF01107879;XM_005378625 XP_005378682 MODEL 39131892 rrna 5S_rRNA 5S ribosomal RNA 8989333 protein-coding Fdxr ferredoxin reductase ENCODES a protein that exhibits ferredoxin-NADP+ reductase activity (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arterial Occlusive Diseases (ortholog); Auditory Neuropathy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955553 1746759 1755316 - 102015157 AGCD01072899;GBBH01012159;XM_005412257;XM_005412259 XP_005412314;XP_005412316 MODEL 8808669 protein-coding Agtpbp1 ATP/GTP binding carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Childhood-Onset Neurodegeneration with Cerebellar Atrophy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955432 1628966 1816373 + 102027328 AGCD01030602;AGCD01030603;AGCD01030604;AGCD01030605;AGCD01030606;GBDF01035729;XM_005387927;XM_005387928;XM_005387929;XM_005387930;XM_013516036;XM_013516037;XR_261503 XP_005387984;XP_005387985;XP_005387986;XP_005387987;XP_013371490;XP_013371491 MODEL 9032470 protein-coding Cbfb core-binding factor subunit beta ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); definitive hemopoiesis (ortholog); lymphocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); bone development disease (ortholog); FOUND IN core-binding factor complex (ortholog); nucleus (ortholog) NW_004955484 9503286 9557066 - 102017240 AGCD01058419;AGCD01058420;AGCD01058421;GBCE01074286;GBDI01134269;XM_005403703 XP_005403760 MODEL 9006604 protein-coding Cmtm8 CKLF like MARVEL transmembrane domain containing 8 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955430 23638734 23728365 + 102025385 AGCD01029836;AGCD01029837;GBBH01090450;GBDJ01228748;XM_005387526 XP_005387583 MODEL 8807606 protein-coding Gfy golgi associated olfactory signaling regulator INVOLVED IN non-motile cilium assembly (ortholog); protein localization to non-motile cilium (ortholog); sensory perception of smell (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955559 1409264 1414932 - 102018036 AGCD01073644;GBBH01114722;XM_005412887 XP_005412944 MODEL 8759254 protein-coding Adcy2 adenylate cyclase 2 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); adenylate cyclase binding (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN adenosine signaling pathway; dopamine signaling pathway via D1 family of receptors; endothelin signaling pathway; ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955504 4990634 5376990 + 102017587 AGCD01064892;AGCD01064893;AGCD01064894;AGCD01064895;AGCD01064896;AGCD01064897;GBCB01003732;XM_005407072 XP_005407129 MODEL 39131578 protein-coding C11orf96 chromosome 11 open reading frame 96 9041084 protein-coding Atxn10 ataxin 10 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); nervous system development (ortholog); neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955413 29956904 30104868 + 102014038 AGCD01014598;AGCD01014599;AGCD01014600;AGCD01014601;GBCQ01014279;GBDJ01075642;XM_013511506 XP_013366960 MODEL 39131758 rrna 5S_rRNA 5S ribosomal RNA 8909408 trna Trnaa-ugc transfer RNA alanine (anticodon UGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978816 AGCD01006174;AGCD01008468;AGCD01026910;AGCD01041021;AGCD01044158;AGCD01045001;AGCD01050627;AGCD01050630;AGCD01051583;AGCD01057078;AGCD01057309;AGCD01064062;AGCD01069830 MODEL 39131541 protein-coding IGFBP4 insulin like growth factor binding protein 4 8832887 protein-coding LOC102007123 olfactory receptor 15-like NW_004955418 29652822 29653751 - 102007123 AGCD01019476;XM_005382358 XP_005382415 MODEL 8832926 protein-coding LOC102010535 protein FAM47A-like NW_004955587 258217 259881 - 102010535 AGCD01076061;GBDF01017135;XM_005414446 XP_005414503 MODEL 8826960 protein-coding Calhm4 calcium homeostasis modulator family member 4 ASSOCIATED WITH epilepsy (ortholog) NW_004955526 126100 137551 - 102026906 AGCD01069212;GBDF01261152;XM_005409746;XM_005409747 XP_005409803;XP_005409804 MODEL 8849921 protein-coding Ing1 inhibitor of growth family member 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein import into nucleus (ortholog); regulation of programmed cell death (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955404 1998665 1999615 - 102012052 AGCD01003243;GBDF01087133;GBDI01222670;XM_013515751 XP_013371205 MODEL 9064356 pseudo LOC102008604 calcyclin-binding protein pseudogene NW_004955460 11101580 11102535 - 102008604 AGCD01048629;XR_263056 MODEL 8956908 protein-coding Edf1 endothelial differentiation related factor 1 ENCODES a protein that exhibits TFIID-class transcription factor complex binding (ortholog); transcription coactivator activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy 14 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955513 4942268 4945645 - 102025493 AGCD01066944;AGCD01066945;GBDF01170783;XM_005408560;XM_013506641 XP_005408617;XP_013362095 MODEL 8966681 protein-coding Dlec1 DLEC1 cilia and flagella associated protein ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955421 4889860 4957787 + 102013511 AGCD01021704;AGCD01021705;AGCD01021706;AGCD01021707;GBDF01153178;XM_005383726 XP_005383783 MODEL 8872071 ncrna LOC102005689 uncharacterized LOC102005689 NW_004955467 6901040 6907444 - 102005689 AGCD01051425;GBDF01303832;XR_263347 MODEL 9017287 protein-coding LOC102021885 zinc finger protein 709-like NW_004955494 8355432 8383974 + 102021885 AGCD01061583;AGCD01061584;GBDF01086917;XM_013505020 XP_013360474 MODEL 8809741 protein-coding Grin3a glutamate ionotropic receptor NMDA type subunit 3A ENCODES a protein that exhibits calcium channel activity (ortholog); glycine binding (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); calcium ion transport (ortholog); dendrite development (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); brain ischemia (ortholog); Experimental Arthritis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955419 24105360 24272533 + 102007018 AGCD01020338;AGCD01020339;AGCD01020340;GBDF01095512;XM_005382793;XM_013513084 XP_005382850;XP_013368538 MODEL 8732835 ncrna LOC102006782 uncharacterized LOC102006782 NW_004955487 482152 483842 + 102006782 AGCD01059218;GBCE01175126;XR_001231161 MODEL 8756018 protein-coding LOC102003925 protein FAM127A NW_004955602 174103 174639 - 102003925 AGCD01076766;GBCB01040403;XM_005414829 XP_005414886 MODEL 8931344 protein-coding Abca2 ATP binding cassette subfamily A member 2 ENCODES a protein that exhibits ATP binding (ortholog); ceramide floppase activity (ortholog); endopeptidase regulator activity (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); ceramide translocation (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955513 5035879 5051140 - 102029101 AGCD01066951;GBCB01039194;GBDK01084651;XM_013506707 XP_013362161 MODEL 8918811 protein-coding Ckap5 cytoskeleton associated protein 5 ENCODES a protein that exhibits microtubule binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); centrosome cycle (ortholog); cytoplasmic translation (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955422 1266686 1354323 + 102007444 AGCD01022452;AGCD01022453;AGCD01022454;AGCD01022455;AGCD01022456;GBBH01163556;GBDF01049537;XM_013514063 XP_013369517 MODEL 8803293 protein-coding Adcy3 adenylate cyclase 3 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN acrosome reaction (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Bulimia (ortholog); cardiomyopathy (ortholog); FOUND IN acrosomal vesicle (ortholog); apical cytoplasm (ortholog); ciliary membrane (ortholog) NW_004955469 6933208 7026179 - 102029496 AGCD01052399;AGCD01052400;AGCD01052401;AGCD01052402;AGCD01052403;GBBH01198294;GBDK01116618;XM_013522659 XP_013378113 MODEL 9066791 protein-coding Commd4 COMM domain containing 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955450 2891920 2895009 - 102028254 AGCD01042410;GBDF01053982;XM_013518817;XM_013518818 XP_013374271;XP_013374272 MODEL 8872496 protein-coding Esyt1 extended synaptotagmin 1 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid transfer activity (ortholog); INVOLVED IN intermembrane lipid transfer (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955458 3732968 3746856 + 102026723 AGCD01047340;AGCD01047341;AGCD01047342;GBCQ01033561;GBDK01346750;XM_013520965 XP_013376419 MODEL 8888703 protein-coding Cep68 centrosomal protein 68 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) NW_004955424 19424088 19439126 - 102005059 AGCD01024825;GBCB01077392;GBDF01162527;XM_013514674 XP_013370128 MODEL 9013245 protein-coding Ccdc88a coiled-coil and HOOK domain protein 88A ENCODES a protein that exhibits actin binding (ortholog); epidermal growth factor receptor binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cell migration (ortholog); lamellipodium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell leading edge (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955424 27617833 27771385 + 102008553 AGCD01025122;AGCD01025123;AGCD01025124;AGCD01025125;AGCD01025126;GBCE01176369;GBDF01048950;XM_005385778;XM_005385779;XM_005385780;XM_013514611;XM_013514612;XM_013514613;XR_001234162 XP_005385835;XP_005385836;XP_005385837;XP_013370065;XP_013370066;XP_013370067 MODEL 8755527 pseudo LOC102009751 pre-mRNA-splicing factor RBM22 pseudogene NW_004955434 8957904 8962702 + 102009751 AGCD01032281;AGCD01032282 MODEL 9057001 protein-coding LOC102011291 cytochrome P450 4A11-like NW_004955464 11487951 11500616 - 102011291 AGCD01050155;GBBH01214209;XM_005398645;XM_005398647 XP_005398702;XP_005398704 MODEL 9053809 protein-coding Kcnv1 potassium voltage-gated channel modifier subfamily V member 1 ENCODES a protein that exhibits potassium channel activity (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955417 17292459 17298773 - 102026005 AGCD01018289;GBCQ01113591;XM_005381887 XP_005381944 MODEL 9014295 protein-coding LOC102009370 protein FAM69A NW_004955469 9920282 9922602 + 102009370 AGCD01052521;GBCB01040907;GBDJ01083890;XM_005400517 XP_005400574 MODEL 8715403 protein-coding Cdk18 cyclin dependent kinase 18 INVOLVED IN positive regulation of myelination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 41228802 41256413 + 102009249 AGCD01006674;AGCD01006675;GBBH01188253;XM_005375359 XP_005375416 MODEL 8943653 ncrna LOC102008606 uncharacterized LOC102008606 NW_004955410 29146901 29160996 - 102008606 AGCD01011276;GBDF01148292;XR_001232701;XR_001232702 MODEL 39131894 rrna 5S_rRNA 5S ribosomal RNA 8921901 protein-coding Aco1 aconitase 1 ENCODES a protein that exhibits 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); aconitate hydratase activity (ortholog); INVOLVED IN citrate metabolic process (ortholog); intestinal absorption (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN doxorubicin response pathway; iron homeostasis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955472 3141473 3170959 - 102015311 AGCD01053504;GBBH01089727;XM_013522946 XP_013378400 MODEL 8703787 ncrna LOC102011736 uncharacterized LOC102011736 NW_004955456 6662166 6678865 - 102011736 AGCD01046375;GBDF01041115;XR_001236334 MODEL 8914181 protein-coding Lman1 lectin, mannose binding 1 ENCODES a protein that exhibits identical protein binding (ortholog); metal ion binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endoplasmic reticulum organization (ortholog); gene expression (ortholog); PARTICIPATES IN protein secretory pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cargo receptor complex (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum (ortholog) NW_004955402 43465556 43495789 - 102014193 AGCD01001073;GBDI01115194;XM_005373001;XM_013511080 XP_005373058;XP_013366534 MODEL 39133825 misc_rna 7SK 7SK RNA 8810591 protein-coding Cmtr1 cap methyltransferase 1 ENCODES a protein that exhibits methyltransferase cap1 activity (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); mRNA processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 5721420 5766316 - 102017912 AGCD01034397;AGCD01034398;GBDJ01174624;XM_005389614;XM_005389615 XP_005389671;XP_005389672 MODEL 8979113 protein-coding Gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); Golgi to plasma membrane transport (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) NW_004955413 24018595 24037887 + 102006445 AGCD01014344;AGCD01014345;GBBH01087702;XM_005379210;XM_005379213 XP_005379267;XP_005379270 MODEL 8867541 protein-coding Als2cl ALS2 C-terminal like ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955420 25440641 25455872 + 102021671 AGCD01021358;GBBH01165303;XM_005383428;XM_005383430;XM_005383431;XM_005383433;XM_013513492 XP_005383485;XP_005383487;XP_005383488;XP_005383490;XP_013368946 MODEL 39133959 misc_rna 7SK 7SK RNA 8949266 ncrna LOC102004280 uncharacterized LOC102004280 NW_004955482 1521498 1525666 - 102004280 AGCD01057219;GBBH01079736;XR_263818 MODEL 9026084 pseudo LOC102004637 TBC1 domain family member 12 pseudogene NW_004955435 21292150 21303948 - 102004637 AGCD01033474;AGCD01033475 MODEL 39131759 rrna 5S_rRNA 5S ribosomal RNA 9065120 protein-coding Cd300e CD300e molecule ENCODES a protein that exhibits cocaine binding (ortholog); INVOLVED IN immune response (ortholog); FOUND IN cell surface (ortholog) NW_004955553 1516899 1587355 - 102012587 AGCD01072886;AGCD01072887;AGCD01072888;AGCD01072889;AGCD01072890;AGCD01072891;AGCD01072892;AGCD01072893;GBDK01238943;XM_005412248;XM_013508641 XP_005412305;XP_013364095 MODEL 9028418 protein-coding Jpt1 Jupiter microtubule associated homolog 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955553 2016822 2034576 - 102022023 AGCD01072911;GBBH01139670;XM_005412279;XM_005412280 XP_005412336;XP_005412337 MODEL 9004116 protein-coding Ano4 anoctamin 4 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 36350013 36715740 + 102023552 AGCD01005417;AGCD01005418;AGCD01005419;AGCD01005420;AGCD01005421;AGCD01005422;AGCD01005423;AGCD01005424;AGCD01005425;GBCE01103559;XM_005374542;XM_013518664 XP_005374599;XP_013374118 MODEL 8835382 ncrna LOC102010538 uncharacterized LOC102010538 NW_004955403 1911461 1914126 - 102010538 AGCD01001726;GBDF01042347;XR_259133 MODEL 8805417 protein-coding Calhm5 calcium homeostasis modulator family member 5 ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); FOUND IN plasma membrane (ortholog) NW_004955526 203971 213328 - 102025614 AGCD01069215;GBDI01311146;XM_005409741 XP_005409798 MODEL 39134224 misc_rna 7SK 7SK RNA 8819312 protein-coding Htr4 5-hydroxytryptamine receptor 4 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH Anorexia (ortholog); anorexia nervosa (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); glutamatergic synapse (ortholog) NW_004955415 5745056 5802409 + 102004471 AGCD01015998;AGCD01015999;AGCD01016000;AGCD01016001;XM_013512121 XP_013367575 MODEL 9049702 protein-coding LOC102012903 CMRF35-like molecule 4 NW_004955553 1487167 1496439 - 102012903 AGCD01072886;GBCE01119428;XM_005412249;XM_005412250 XP_005412306;XP_005412307 MODEL 9030055 pseudo LOC102017800 heterogeneous nuclear ribonucleoproteins A2/B1 pseudogene NW_004955428 18182006 18184385 - 102017800 AGCD01028058 MODEL 8891580 protein-coding Agtr1 angiotensin II receptor type 1 ENCODES a protein that exhibits angiotensin type I receptor activity (ortholog); angiotensin type II receptor activity (ortholog); bradykinin receptor binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); angiotensin-activated signaling pathway (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Alveolar Bone Loss (ortholog); Alzheimer's disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasmic vesicle (ortholog); dendrite (ortholog) NW_004955474 8733942 8781305 - 102016153 AGCD01054560;AGCD01054561;GBCB01076032;XM_005401426;XM_013502791;XR_001230743 XP_005401483;XP_013358245 MODEL 8974936 protein-coding Eif4g1 eukaryotic translation initiation factor 4 gamma 1 ENCODES a protein that exhibits ATP binding (ortholog); eukaryotic initiation factor 4E binding (ortholog); mRNA binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to nutrient levels (ortholog); energy homeostasis (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955420 23161541 23179788 - 102020675 AGCD01021230;AGCD01021231;GBBH01061725;GBDJ01083746;XM_013513357 XP_013368811 MODEL 8971751 protein-coding Araf A-Raf proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of peptidyl-serine phosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) NW_004955516 521479 532980 - 102013202 AGCD01067385;GBBH01063423;XM_005408933;XM_013506911 XP_005408990;XP_013362365 MODEL 9022418 protein-coding Abca3 ATP binding cassette subfamily A member 3 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled intramembrane lipid carrier activity (ortholog); INVOLVED IN lung development (ortholog); phosphatidylcholine metabolic process (ortholog); phosphatidylglycerol metabolic process (ortholog); PARTICIPATES IN altered surfactant homeostasis pathway; surfactant homeostasis pathway; transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); carbamoyl phosphate synthetase I deficiency disease (ortholog); cervical cancer (ortholog); FOUND IN alveolar lamellar body (ortholog); alveolar lamellar body membrane (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955442 14933550 14989492 + 102023749 AGCD01037852;AGCD01037853;GBDK01020576;XM_005391428;XM_005391429 XP_005391485;XP_005391486 MODEL 8960203 protein-coding Igfbp5 insulin like growth factor binding protein 5 ENCODES a protein that exhibits fibronectin binding (ortholog); insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cAMP (ortholog); female pregnancy (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); insulin-like growth factor ternary complex (ortholog) NW_004955453 16530110 16550733 + 102021941 AGCD01044905;GBCE01051975;XM_005395681 XP_005395738 MODEL 8699537 protein-coding Entrep1 endosomal transmembrane epsin interactor 1 ENCODES a protein that exhibits ubiquitin ligase activator activity (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); negative adaptation of signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) NW_004955434 3615284 3704014 - 102004633 AGCD01032137;AGCD01032138;AGCD01032139;AGCD01032140;AGCD01032141;GBBH01142742;GBCB01007711;XM_005388562 XP_005388619 MODEL 10243333 ncrna LOC106149967 uncharacterized LOC106149967 NW_004955458 9925818 9930758 + 106149967 AGCD01047667;GBDF01005033;XR_001236461 MODEL 8751024 protein-coding Ing2 inhibitor of growth family member 2 ENCODES a protein that exhibits DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); male germ-line stem cell asymmetric division (ortholog); male meiosis I (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 25325600 25331175 - 102009672 AGCD01002286;AGCD01002287;GBDF01188823;XM_005373503 XP_005373560 MODEL 8830029 protein-coding Commd5 COMM domain containing 5 INVOLVED IN positive regulation of cell growth (ortholog); positive regulation of epithelial cell differentiation (ortholog); proximal tubule morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955454 3322253 3324313 - 102017841 AGCD01045066;GBDK01146066;XM_005395929;XM_005395930 XP_005395986;XP_005395987 MODEL 8924018 protein-coding Chfr checkpoint with forkhead and ring finger domains ENCODES a protein that exhibits nucleotide binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN meiotic spindle checkpoint signaling (ortholog); mitotic cell cycle (ortholog); mitotic G2/M transition checkpoint (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog); PML body (ortholog) NW_004955482 233485 267064 + 102016596 AGCD01057167;AGCD01057168;GBDK01193286;XM_005402938;XM_005402939 XP_005402995;XP_005402996 MODEL 8935149 protein-coding Fech ferrochelatase ENCODES a protein that exhibits heme binding (ortholog); identical protein binding (ortholog); iron ion binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cholesterol metabolic process (ortholog); detection of UV (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bile duct disease (ortholog); cervical cancer (ortholog); FOUND IN ATP-binding cassette (ABC) transporter complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog) NW_004955402 41902868 41938099 - 102005866 AGCD01001027;AGCD01001028;GBDI01250468;XM_005372975 XP_005373032 MODEL 8795949 protein-coding Dleu7 deleted in lymphocytic leukemia 7 NW_004955431 4205391 4220305 - 102029215 AGCD01029989;XM_005387603 XP_005387660 MODEL 8870204 protein-coding Cbl Cbl proto-oncogene ENCODES a protein that exhibits ephrin receptor binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN axon (ortholog); cilium (ortholog); cytosol (ortholog) NW_004955412 20307011 20388539 + 102004586 AGCD01013004;AGCD01013005;AGCD01013006;AGCD01013007;GBDF01124291;XM_005378327 XP_005378384 MODEL 8952705 ncrna LOC102009372 uncharacterized LOC102009372 NW_004955470 3387443 3399619 - 102009372 AGCD01052700;GBDF01014209;XR_263462 MODEL 9065833 protein-coding Edil3 EGF like and discoidin domains 3 INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); osteoarthritis (ortholog) NW_004955418 26391309 26680553 + 102004165 AGCD01019394;AGCD01019395;AGCD01019396;AGCD01019397;AGCD01019398;GBBH01020972;XM_013513061 XP_013368515 MODEL 8956473 ncrna LOC102005690 uncharacterized LOC102005690 NW_004955413 2434741 2435420 - 102005690 AGCD01013546;GBDF01017398;XR_260051 MODEL 39131365 protein-coding C13orf42 chromosome 13 open reading frame 42 8724632 protein-coding LOC102008614 cytochrome c oxidase subunit 7A1, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); dilated cardiomyopathy (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog); respiratory chain complex IV (ortholog) NW_004955468 2442819 2445169 + 102008614 AGCD01051817;GBCQ01010676;XM_005399919 XP_005399976 MODEL 39131895 rrna 5S_rRNA 5S ribosomal RNA 8813819 protein-coding LOC102021887 zinc finger protein 26-like NW_004955495 970228 1001874 - 102021887 AGCD01061663;GBCQ01059108;XM_013505065;XM_013505066;XM_013505067;XM_013505068;XM_013505069;XM_013505070 XP_013360519;XP_013360520;XP_013360521;XP_013360522;XP_013360523;XP_013360524 MODEL 8873469 ncrna LOC102006789 uncharacterized LOC102006789 NW_004955424 2250910 2258353 + 102006789 AGCD01024265;GBDF01111914;XR_261034 MODEL 8790672 protein-coding Grin3b glutamate ionotropic receptor NMDA type subunit 3B ENCODES a protein that exhibits calcium channel activity (ortholog); glycine binding (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN cellular response to glycine (ortholog); hypothalamus development (ortholog); ionotropic glutamate receptor signaling pathway (ortholog); PARTICIPATES IN excitatory synaptic transmission pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); middle cerebral artery infarction (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); neuronal cell body (ortholog); neurotransmitter receptor complex (ortholog) NW_004955495 6859909 6866297 - 102016070 AGCD01062098;GBDF01262578;XM_013505060 XP_013360514 MODEL 8761451 protein-coding Atxn1l ataxin 1 like ENCODES a protein that exhibits POZ domain binding (ortholog); INVOLVED IN brain development (ortholog); extracellular matrix organization (ortholog); learning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); Spinocerebellar Ataxias (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955484 4546012 4557184 + 102014568 AGCD01058220;GBDF01010365;XM_005403518;XM_005403519 XP_005403575;XP_005403576 MODEL 39133826 misc_rna 7SK 7SK RNA 8784210 protein-coding Cmtr2 cap methyltransferase 2 ENCODES a protein that exhibits methyltransferase cap2 activity (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); lung adenocarcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955484 3999655 4006632 - 102007664 AGCD01058200;GBDJ01116079;XM_005403496;XM_013504016 XP_005403553;XP_013359470 MODEL 8876439 protein-coding LOC102008252 cartilage oligomeric matrix protein NW_004955524 2879519 2884305 + 102008252 AGCD01068843;GBDI01053407;GBDK01101224;XM_013507182 XP_013362636 MODEL 9006095 protein-coding Esyt2 extended synaptotagmin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); INVOLVED IN fibroblast migration (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955579 971556 1052575 - 102006404 AGCD01075561;AGCD01075562;AGCD01075563;AGCD01075564;GBDJ01073043;XM_013509669 XP_013365123 MODEL 8982233 protein-coding Cep70 centrosomal protein 70 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN acrosome assembly (ortholog); apoptotic process (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955501 478920 533104 + 102004731 AGCD01064030;AGCD01064031;AGCD01064032;GBDI01227221;XM_005406727;XM_005406728;XM_005406729;XM_013505738;XM_013505739;XM_013505740;XM_013505742;XM_013505743;XM_013505744;XM_013505745 XP_005406784;XP_005406785;XP_005406786;XP_013361192;XP_013361193;XP_013361194;XP_013361196;XP_013361197;XP_013361198;XP_013361199 MODEL 8923945 protein-coding LOC102011292 translation initiation factor IF-2-like NW_004955411 5098018 5101336 - 102011292 AGCD01011594;GBDF01039872;XM_005377923 XP_005377980 MODEL 8899082 protein-coding Ccdc88b coiled-coil and HOOK domain protein 88B INVOLVED IN defense response to protozoan (ortholog); positive regulation of cytokine production (ortholog); positive regulation of T cell activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955422 20738202 20751016 - 102010272 AGCD01023086;GBBH01228305;XM_013514221;XM_013514222;XM_013514223;XM_013514224 XP_013369675;XP_013369676;XP_013369677;XP_013369678 MODEL 8849789 protein-coding Ano5 anoctamin 5 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); plasma membrane repair (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955476 2705596 2777848 + 102009046 AGCD01055234;GBCB01020533;GBCB01020534;XM_013503010 XP_013358464 MODEL 8964948 protein-coding Kcnv2 potassium voltage-gated channel modifier subfamily V member 2 ASSOCIATED WITH amblyopia (ortholog); cerebellar ataxia (ortholog); Cognitive Dysfunction (ortholog) NW_004955434 7122287 7133737 + 102018854 AGCD01032227;XM_005388613 XP_005388670 MODEL 8871207 protein-coding LOC102009752 glutathione S-transferase Mu 2 NW_004955435 13200085 13206236 + 102009752 AGCD01033197;GBCQ01122645;XM_013516459;XM_013516460 XP_013371913;XP_013371914 MODEL 8714507 protein-coding Ing3 inhibitor of growth family member 3 ENCODES a protein that exhibits histone H2A acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); thymoma (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955479 2741554 2771524 + 102006242 AGCD01056281;GBDF01158853;XM_005402308;XM_005402309;XM_005402310;XM_013503291;XM_013503292 XP_005402365;XP_005402366;XP_005402367;XP_013358745;XP_013358746 MODEL 8847679 protein-coding Cdk19 cyclin dependent kinase 19 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); positive regulation of apoptotic process (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy 87 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955411 35312722 35411951 - 102023789 AGCD01012427;AGCD01012428;AGCD01012429;GBBH01149560;GBDK01130876;XM_013510868 XP_013366322 MODEL 8748320 protein-coding Ckb creatine kinase B ENCODES a protein that exhibits creatine kinase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to wortmannin (ortholog); cerebellum development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); mitochondrion (ortholog) NW_004955538 2379868 2380771 - 102017056 AGCD01071123;GBCQ01000449;GBDI01007602;XM_013507840 XP_013363294 MODEL 8881134 pseudo LOC102007124 allograft inflammatory factor 1 pseudogene NW_004955419 15234825 15235399 - 102007124 AGCD01020068;XR_260632 MODEL 39133960 misc_rna 7SK 7SK RNA 8785225 protein-coding Agtr2 angiotensin II receptor type 2 ENCODES a protein that exhibits angiotensin type II receptor activity (ortholog); transcription factor binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); brain renin-angiotensin system (ortholog); PARTICIPATES IN angiotensin II signaling pathway; angiotensin II signaling pathway via AT2 receptor; angiotensin III signaling pathway; ASSOCIATED WITH AIDS-Associated Nephropathy (ortholog); Alveolar Bone Loss (ortholog); asthma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955534 3653112 3654248 - 102021704 AGCD01070589;XM_013507702 XP_013363156 MODEL 8820454 protein-coding Gga2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN Golgi to endosome transport (ortholog); Golgi to plasma membrane protein transport (ortholog); protein localization to cell surface (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome membrane (ortholog); Golgi apparatus (ortholog) NW_004955493 2041791 2068720 - 102014062 AGCD01060922;AGCD01060923;GBCB01022843;GBCE01054393;XM_013504804 XP_013360258 MODEL 9017015 pseudo LOC102004640 coiled-coil domain-containing protein 94 pseudogene NW_004955532 391528 392376 + 102004640 AGCD01070116 MODEL 8864632 protein-coding LOC102004282 histone H2B.v1-like NW_004955483 833570 838166 + 102004282 AGCD01057632;AGCD01057633;GBDI01063041;XM_005403424 XP_005403481 MODEL 39131760 rrna 5S_rRNA 5S ribosomal RNA 8808425 protein-coding Eif4g2 eukaryotic translation initiation factor 4 gamma 2 ENCODES a protein that exhibits translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN heart development (ortholog); negative regulation of autophagy (ortholog); positive regulation of axon extension (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 26389125 26399916 - 102020796 AGCD01015642;AGCD01015643;XM_005380528 XP_005380585 MODEL 8754830 protein-coding Cd300lb CD300 molecule like family member b ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); neutrophil mediated immunity (ortholog); positive regulation of mast cell activation (ortholog); ASSOCIATED WITH melanoma (ortholog) NW_004955553 1382594 1392592 - 102009426 AGCD01072880;GBDK01279225;XM_005412238 XP_005412295 MODEL 8779541 protein-coding Commd6 COMM domain containing 6 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog) NW_004955404 31473054 31487169 + 102022776 AGCD01004020;GBDF01127489;XM_005374177;XM_013516578;XM_013516579 XP_005374234;XP_013372032;XP_013372033 MODEL 8862879 protein-coding LOC102003926 multidrug resistance protein 3 NW_004955607 307152 369339 + 102003926 AGCD01076983;AGCD01076984;XM_005414906;XM_013510114 XP_005414963;XP_013365568 MODEL 39134226 misc_rna 7SK 7SK RNA 8924926 protein-coding Lman1l lectin, mannose binding 1 like ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog) NW_004955450 3111004 3123266 - 102009444 AGCD01042422;GBDJ01215387;XM_005393541;XM_005393542 XP_005393598;XP_005393599 MODEL 8711564 protein-coding Aco2 aconitase 2 ENCODES a protein that exhibits 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); aconitate hydratase activity (ortholog); INVOLVED IN citrate metabolic process (ortholog); isocitrate metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); acute porphyria (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955413 27027341 27065227 + 102019378 AGCD01014491;GBDF01000245;XM_005379352 XP_005379409 MODEL 39131401 protein-coding ALX1 ALX homeobox 1 8770468 protein-coding Dlg1 discs large MAGUK scaffold protein 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); kinesin binding (ortholog); INVOLVED IN actin filament organization (ortholog); activation of protein kinase activity (ortholog); amyloid precursor protein metabolic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955420 13068289 13273805 - 102018402 AGCD01020914;AGCD01020915;AGCD01020916;AGCD01020917;AGCD01020918;AGCD01020919;GBCB01057993;XM_005383157;XM_005383158;XM_005383159;XM_005383163;XM_005383165;XM_005383166;XM_005383167;XM_013513450;XM_013513452;XM_013513453 XP_005383214;XP_005383215;XP_005383216;XP_005383220;XP_005383222;XP_005383223;XP_005383224;XP_013368904;XP_013368906;XP_013368907 MODEL 8742485 ncrna LOC102021888 uncharacterized LOC102021888 NW_004955423 16031061 16038434 + 102021888 AGCD01023823;GBDF01148255;XR_260972 MODEL 8783134 protein-coding Jpt2 Jupiter microtubule associated homolog 2 INVOLVED IN endocytosis involved in viral entry into host cell (ortholog); regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955442 15549223 15563027 - 102025848 AGCD01037876;AGCD01037877;GBDK01197515;XM_005391540;XM_005391541 XP_005391597;XP_005391598 MODEL 8771529 protein-coding Grina glutamate ionotropic receptor NMDA type subunit associated protein 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955454 2657374 2660591 + 102019663 AGCD01045026;GBCE01029592;XM_005395836 XP_005395893 MODEL 9056035 protein-coding Adcy4 adenylate cyclase 4 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955409 35966529 35982839 + 102030158 AGCD01010437;AGCD01010438;GBBH01227879;GBCE01034250;XM_005377013 XP_005377070 MODEL 8852225 protein-coding Abca4 ATP binding cassette subfamily A member 4 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); all-trans retinal binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN phospholipid transfer to membrane (ortholog); phospholipid translocation (ortholog); photoreceptor cell maintenance (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH age related macular degeneration (ortholog); age related macular degeneration 14 (ortholog); age related macular degeneration 2 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955423 612098 738702 + 102010915 AGCD01023416;AGCD01023417;GBDJ01166590;XM_005385003 XP_005385060 MODEL 8941545 ncrna LOC102008254 uncharacterized LOC102008254 NW_004955436 16825530 16828910 + 102008254 AGCD01033933;GBDF01144258;XR_261796 MODEL 8721787 protein-coding Cmya5 cardiomyopathy associated 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN negative regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of skeletal muscle adaptation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN costamere (ortholog) NW_004955425 21410396 21517307 - 102011680 AGCD01025790;AGCD01025791;AGCD01025792;AGCD01025793;AGCD01025794;AGCD01025795;AGCD01025796;AGCD01025797;AGCD01025798;GBCB01000768;XM_005386007;XM_005386008 XP_005386064;XP_005386065 MODEL 8983906 protein-coding LOC102010539 T-complex protein 1 subunit alpha-like NW_004957703 193 1109 - 102010539 AGCD01081099;GBCC01015007;GBDI01244130;XM_005415234 XP_005415291 MODEL 8971942 protein-coding Entrep2 endosomal transmembrane epsin interactor 2 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955416 29103925 29389149 + 102020337 AGCD01017645;AGCD01017646;AGCD01017647;AGCD01017648;AGCD01017649;AGCD01017650;AGCD01017651;AGCD01017652;AGCD01017653;AGCD01017654;AGCD01017655;GBDF01273920;XM_013512428 XP_013367882 MODEL 8797777 protein-coding Htr5a 5-hydroxytryptamine receptor 5A ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); ASSOCIATED WITH autistic disorder (ortholog); intracranial hypertension (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN dendrite (ortholog); perikaryon (ortholog); plasma membrane (ortholog) NW_004955491 8258032 8266503 + 102017028 AGCD01060611;XM_005404860 XP_005404917 MODEL 8734323 protein-coding LOC102012904 heterogeneous nuclear ribonucleoproteins A2/B1-like NW_004955442 15309996 15311329 - 102012904 AGCD01037865;GBDF01258035;XM_005391493 XP_005391550 MODEL 8844852 pseudo LOC102011738 TBC1 domain family member 31-like NW_004955407 28180371 28202117 - 102011738 AGCD01007576;AGCD01007577 MODEL 8852622 ncrna LOC102009373 uncharacterized LOC102009373 NW_004955471 267562 303293 + 102009373 AGCD01052952;AGCD01052953;AGCD01052954;GBDK01102526;XR_001237060;XR_263510 MODEL 8835659 pseudo LOC102017802 transcription factor SPT20 homolog pseudogene NW_004955509 4675525 4678213 - 102017802 AGCD01066084;XM_005407843 MODEL 9004883 protein-coding Cblb Cbl proto-oncogene B ENCODES a protein that exhibits protein kinase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); immune response (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955427 6601651 6812896 - 102016178 AGCD01027033;AGCD01027034;AGCD01027035;AGCD01027036;AGCD01027037;AGCD01027038;GBCE01136888;GBDF01083852;XM_013515156 XP_013370610 MODEL 9028114 protein-coding Ano6 anoctamin 6 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); identical protein binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); bleb assembly (ortholog); blood coagulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosing spondylitis (ortholog); colon adenocarcinoma (ortholog); FOUND IN chloride channel complex (ortholog); cholinergic synapse (ortholog); plasma membrane (ortholog) NW_004955500 4462314 4652634 + 102008642 AGCD01063796;AGCD01063797;AGCD01063798;AGCD01063799;AGCD01063800;AGCD01063801;AGCD01063802;AGCD01063803;AGCD01063804;AGCD01063805;GBDK01110938;XM_005406593;XM_013505696;XM_013505697;XM_013505698;XM_013505699 XP_005406650;XP_013361150;XP_013361151;XP_013361152;XP_013361153 MODEL 8854866 protein-coding Kcp kielin cysteine rich BMP regulator INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); positive regulation of BMP signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955479 9670430 9727275 - 102023909 AGCD01056486;AGCD01056487;AGCD01056488;AGCD01056489;AGCD01056490;AGCD01056491;AGCD01056492;AGCD01056493;AGCD01056494;GBBH01155393;GBDI01225998;XM_013503259 XP_013358713 MODEL 10220772 pseudo LOC102011300 Ig heavy chain V-I region 5-like NW_004955470 472783 473374 - 102011300 AGCD01052614 MODEL 8742025 protein-coding LOC102005691 NKG2-D type II integral membrane protein ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); negative regulation of GTPase activity (ortholog); negative regulation of natural killer cell chemotaxis (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955413 7489158 7503014 + 102005691 AGCD01013822;GBDK01000444;XM_013511691;XM_013511692;XR_260066 XP_013367145;XP_013367146 MODEL 9005647 protein-coding Edn1 endothelin 1 ENCODES a protein that exhibits cytokine activity (ortholog); endothelin A receptor binding (ortholog); endothelin B receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); artery smooth muscle contraction (ortholog); axon extension (ortholog); PARTICIPATES IN endothelin signaling pathway; hypoxia inducible factor pathway; inflammatory response pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN basal part of cell (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955465 2287906 2314945 - 102016360 AGCD01050349;AGCD01050350;GBCQ01058513;XM_005398820 XP_005398877 MODEL 8930253 protein-coding Ing4 inhibitor of growth family member 4 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 4263647 4274476 - 102022903 AGCD01013604;GBDJ01129502;XM_005378800;XM_005378801;XM_005378802;XM_005378803;XM_013511346;XM_013511347;XM_013511348 XP_005378857;XP_005378858;XP_005378859;XP_005378860;XP_013366800;XP_013366801;XP_013366802 MODEL 8952678 protein-coding LOC102008615 zinc finger protein 792 NW_004955468 4295637 4302563 - 102008615 AGCD01051905;GBCQ01021284;XM_013522370;XM_013522371;XM_013522372;XM_013522373 XP_013377824;XP_013377825;XP_013377826;XP_013377827 MODEL 8971569 protein-coding LOC102007129 cyclic nucleotide-binding domain-containing protein 2-like NW_004955488 6614698 6616169 - 102007129 AGCD01059662;XM_013504412 XP_013359866 MODEL 9016217 protein-coding Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); type 1 angiotensin receptor binding (ortholog); INVOLVED IN negative regulation of stress fiber assembly (ortholog); photoreceptor cell maintenance (ortholog); positive regulation of filopodium assembly (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); extrinsic component of plasma membrane (ortholog) NW_004955414 18667108 18726259 + 102020792 AGCD01015286;GBCQ01122216;XM_005379969;XM_005379970;XM_005379972;XM_005379973;XM_005379975;XM_005379977;XM_005379979;XM_013511970 XP_005380026;XP_005380027;XP_005380029;XP_005380030;XP_005380032;XP_005380034;XP_005380036;XP_013367424 MODEL 15036839 trna Trnac-aca transfer RNA cysteine (anticodon ACA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978832 39133828 misc_rna 7SK 7SK RNA 8737255 protein-coding Igfbp6 insulin like growth factor binding protein 6 ENCODES a protein that exhibits identical protein binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of stress-activated MAPK cascade (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); contact dermatitis (ortholog); endometriosis (ortholog); FOUND IN extracellular region (ortholog); insulin-like growth factor binary complex (ortholog) NW_004955458 377929 382109 + 102011740 AGCD01047122;GBDJ01023220;XM_005397143 XP_005397200 MODEL 8954832 protein-coding Dlg2 discs large MAGUK scaffold protein 2 ENCODES a protein that exhibits kinase binding (ortholog); PDZ domain binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to potassium ion (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN axon initial segment (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955414 7247248 9171664 + 102022378 AGCD01014951;AGCD01014952;AGCD01014953;AGCD01014954;AGCD01014955;AGCD01014956;AGCD01014957;AGCD01014958;AGCD01014959;AGCD01014960;AGCD01014961;AGCD01014962;AGCD01014963;AGCD01014964;AGCD01014965;AGCD01014966;AGCD01014967;AGCD01014968;AGCD01014969;AGCD01014970;AGCD01014971;AGCD01014972;AGCD01014973;AGCD01014974;AGCD01014975;AGCD01014976;AGCD01014977;AGCD01014978;AGCD01014979;AGCD01014980;AGCD01014981;AGCD01014982;AGCD01014983;AGCD01014984;AGCD01014985;AGCD01014986;AGCD01014987;AGCD01014988;AGCD01014989;AGCD01014990;AGCD01014991;AGCD01014992;AGCD01014993;AGCD01014994;AGCD01014995;AGCD01014996;AGCD01014997;AGCD01014998;AGCD01014999;AGCD01015000;AGCD01015001;AGCD01015002;AGCD01015003;AGCD01015004;AGCD01015005;AGCD01015006;AGCD01015007;AGCD01015008;AGCD01015009;AGCD01015010;GBDK01207539;XM_005379786;XM_005379787;XM_005379790;XM_013511774;XM_013511775;XM_013511776;XM_013511777;XM_013511778;XM_013511779;XM_013511780;XM_013511781;XM_013511782;XM_013511783;XM_013511784;XM_013511785;XM_013511786;XM_013511787;XM_013511788;XM_013511789;XM_013511790;XM_013511791 XP_005379843;XP_005379844;XP_005379847;XP_013367228;XP_013367229;XP_013367230;XP_013367231;XP_013367232;XP_013367233;XP_013367234;XP_013367235;XP_013367236;XP_013367237;XP_013367238;XP_013367239;XP_013367240;XP_013367241;XP_013367242;XP_013367243;XP_013367244;XP_013367245 MODEL 8873541 protein-coding LOC102004641 cytochrome b-245 light chain ENCODES a protein that exhibits electron transfer activity (ortholog); protein heterodimerization activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to gamma radiation (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955541 2570843 2573822 - 102004641 AGCD01071416;GBCQ01010127;GBDI01016531;XM_013507989 XP_013363443 MODEL 9020056 protein-coding Esyt3 extended synaptotagmin 3 INVOLVED IN fibroblast migration (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955501 537195 585640 - 102016293 AGCD01064032;AGCD01064033;AGCD01064034;GBDJ01208218;GBDK01433210;XM_005406863 XP_005406920 MODEL 9060079 protein-coding Cd300lf CD300 molecule like family member f ENCODES a protein that exhibits ceramide binding (ortholog); identical protein binding (ortholog); interleukin-4 receptor binding (ortholog); INVOLVED IN interleukin-13-mediated signaling pathway (ortholog); negative regulation of apoptotic cell clearance (ortholog); negative regulation of mast cell activation (ortholog) NW_004955553 1596406 1610479 - 102011595 AGCD01072893;GBDK01019376;XM_005412247;XM_013508640 XP_005412304;XP_013364094 MODEL 8826132 protein-coding Cep72 centrosomal protein 72 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN centriole replication (ortholog); gamma-tubulin complex localization (ortholog); regulation of protein localization to centrosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) NW_004955504 305181 335791 + 102022106 AGCD01064817;GBDF01050401;XM_005407003;XM_013505910;XM_013505911;XM_013505912;XM_013505913;XM_013505914;XR_001231552;XR_001231553 XP_005407060;XP_013361364;XP_013361365;XP_013361366;XP_013361367;XP_013361368 MODEL 9052032 protein-coding Ccdc88c coiled-coil and HOOK domain protein 88C ENCODES a protein that exhibits frizzled binding (ortholog); G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN apical constriction (ortholog); cilium movement (ortholog); cilium organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN anchoring junction (ortholog); apical junction complex (ortholog); cell junction (ortholog) NW_004955438 13585469 13708170 - 102011590 AGCD01035295;AGCD01035296;AGCD01035297;GBDI01077384;GBDJ01133774;XM_005390438 XP_005390495 MODEL 8826406 protein-coding Fem1a fem-1 homolog A ENCODES a protein that exhibits EP4 subtype prostaglandin E2 receptor binding (ortholog); molecular adaptor activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of MAP kinase activity (ortholog); positive regulation of inflammatory response (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955495 4214250 4217313 - 102003564 AGCD01061903;GBBH01062827;XM_005405778 XP_005405835 MODEL 9066441 protein-coding Calhm6 calcium homeostasis modulator family member 6 ENCODES a protein that exhibits voltage-gated channel activity (ortholog); INVOLVED IN ATP export (ortholog); regulation of natural killer cell cytokine production (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN immunological synapse (ortholog); plasma membrane (ortholog) NW_004955526 319920 321985 - 102028227 AGCD01069223;GBDI01327371;XM_005415313 XP_005415370 MODEL 9001508 pseudo LOC102009753 ADP-ribosylation factor-like protein 15 pseudogene NW_004955436 1336836 1341038 - 102009753 AGCD01033575 MODEL 39131896 rrna 5S_rRNA 5S ribosomal RNA 8978867 protein-coding Cdk2 cyclin dependent kinase 2 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein kinase activity (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); centriole replication (ortholog); DNA damage response (ortholog); PARTICIPATES IN G1/S transition pathway; interleukin-2 signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cajal body (ortholog); centrosome (ortholog); chromosome, telomeric region (ortholog) NW_004955458 3555603 3561063 + 102024879 AGCD01047319;GBDF01043717;XM_005397270;XM_005397271 XP_005397327;XP_005397328 MODEL 8998473 protein-coding Atxn2 ataxin 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); INVOLVED IN cerebellar Purkinje cell differentiation (ortholog); homeostasis of number of cells (ortholog); negative regulation of multicellular organism growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); Golgi apparatus (ortholog) NW_004955482 8101410 8187815 - 102028635 AGCD01057503;AGCD01057504;AGCD01057505;AGCD01057506;AGCD01057507;AGCD01057508;AGCD01057509;AGCD01057510;GBDI01131383;XM_013503648 XP_013359102 MODEL 39133961 misc_rna 7SK 7SK RNA 8703664 protein-coding Ckm creatine kinase, M-type ENCODES a protein that exhibits creatine kinase activity (ortholog); INVOLVED IN phosphocreatine biosynthetic process (ortholog); PARTICIPATES IN creatine metabolic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Colonic Neoplasms (ortholog); Familial Prostate Cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955555 2318072 2330733 - 102009326 AGCD01073144;AGCD01073145;GBDJ01231000;XM_005412510 XP_005412567 MODEL 8830654 protein-coding LOC102011301 olfactory receptor 56B1-like NW_004955414 21711391 21712350 + 102011301 AGCD01015429;XM_005380104 XP_005380161 MODEL 8875335 ncrna LOC102004284 uncharacterized LOC102004284 NW_004955420 3065393 3096845 + 102004284 AGCD01020612;GBDF01113022;XR_260679;XR_260680 MODEL 39131761 rrna 5S_rRNA 5S ribosomal RNA 8835072 protein-coding Chga chromogranin A INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); mast cell activation (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); end stage renal disease (ortholog); FOUND IN chromaffin granule (ortholog); extracellular region (ortholog); neuronal dense core vesicle (ortholog) NW_004955438 15092267 15104321 + 102029121 AGCD01035359;GBDI01062982;XM_005390335;XM_005390336;XM_005390337;XM_005390338;XM_005390339 XP_005390392;XP_005390393;XP_005390394;XP_005390395;XP_005390396 MODEL 9017823 protein-coding Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 ENCODES a protein that exhibits cargo adaptor activity (ortholog); protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane protein transport (ortholog); negative regulation of amyloid-beta formation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) NW_004955553 2103694 2124748 - 102024167 AGCD01072923;GBDF01104296;XM_005412287;XM_013508629;XM_013508630 XP_005412344;XP_013364083;XP_013364084 MODEL 8939052 protein-coding Grip1 glutamate receptor interacting protein 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to glycine (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); dendrite (ortholog) NW_004955458 12970858 13179369 - 102024765 AGCD01047794;AGCD01047795;AGCD01047796;GBDK01434190;XM_005397454;XM_005397455;XM_005397458 XP_005397511;XP_005397512;XP_005397515 MODEL 41410888 protein-coding C16orf87 chromosome 16 open reading frame 87 39134227 misc_rna 7SK 7SK RNA 8936907 ncrna LOC102006792 uncharacterized LOC102006792 NW_004955424 19657877 19669500 - 102006792 AGCD01024832;GBBH01074895;XR_001234252;XR_261085 MODEL 8719766 protein-coding Commd7 COMM domain containing 7 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955422 28454984 28464885 + 102007443 AGCD01023354;AGCD01023355;AGCD01023356;GBCB01020579;GBCQ01006048;XM_013514154 XP_013369608 MODEL 8910487 protein-coding LOC102011741 olfactory receptor 12-like NW_004955458 2309459 2310406 + 102011741 AGCD01047223;XM_005397238 XP_005397295 MODEL 8896000 protein-coding Lman2 lectin, mannose binding 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); D-mannose binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN positive regulation of phagocytosis (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); COPI-coated vesicle (ortholog); cytoplasmic vesicle (ortholog) NW_004955408 29581737 29597240 - 102023778 AGCD01008764;AGCD01008765;GBDI01019724;XM_005376426 XP_005376483 MODEL 8847591 protein-coding Cblc Cbl proto-oncogene C ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN negative regulation of epidermal growth factor receptor signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955555 1921896 1941247 + 102021284 AGCD01073116;AGCD01073117;GBBH01167021;GBDK01135462;XM_013508694;XM_013508695;XM_013508696;XM_013508697;XM_013508698 XP_013364148;XP_013364149;XP_013364150;XP_013364151;XP_013364152 MODEL 8771059 protein-coding Agtrap angiotensin II receptor associated protein ENCODES a protein that exhibits angiotensin type II receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of blood pressure (ortholog); response to hypoxia (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; ASSOCIATED WITH acquired metabolic disease (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN cell cortex (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955486 2137249 2149978 - 102007902 AGCD01058990;AGCD01058991;GBDK01194140;XM_005403993 XP_005404050 MODEL 8800031 protein-coding Acod1 aconitate decarboxylase 1 ENCODES a protein that exhibits aconitate decarboxylase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cocaine (ortholog); cellular response to interferon-beta (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH esophageal carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); Invasive Breast Carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955404 30254934 30266898 - 102019764 AGCD01004002;GBDK01343918;XM_013516487;XM_013516490;XM_013516495;XM_013516501;XM_013516502;XM_013516504;XM_013516510;XM_013516514;XM_013516520 XP_013371941;XP_013371944;XP_013371949;XP_013371955;XP_013371956;XP_013371958;XP_013371964;XP_013371968;XP_013371974 MODEL 8955131 protein-coding Edn2 endothelin 2 ENCODES a protein that exhibits endothelin B receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN angiogenesis (ortholog); artery smooth muscle contraction (ortholog); axon extension (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Aortic Rupture (ortholog); Bradycardia (ortholog); Dissecting Aneurysm (ortholog); FOUND IN extracellular region (ortholog) NW_004955537 1228062 1233784 - 102006954 AGCD01070890;GBBH01169615;XM_005410587 XP_005410644 MODEL 9044104 protein-coding LOC102021890 guanylate-binding protein 6-like NW_004955423 4714157 4742518 + 102021890 AGCD01023543;AGCD01023544;AGCD01023545;GBDF01110686;XM_005385352 XP_005385409 MODEL 8951238 ncrna LOC102007135 uncharacterized LOC102007135 NW_004955425 7696784 7698489 - 102007135 AGCD01025391;XR_261135 MODEL 8949222 trna Trnac-gca transfer RNA cysteine (anticodon GCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978833 AGCD01043512;AGCD01043513;AGCD01043523;AGCD01057606;AGCD01060445;AGCD01060446;AGCD01060454;AGCD01060455;AGCD01060458;AGCD01060459;AGCD01060460;AGCD01060462;AGCD01064185;AGCD01079692;AGCD01079693;AGCD01079767;AGCD01079768 MODEL 9008608 protein-coding Ing5 inhibitor of growth family member 5 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog); histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog) NW_004955542 135634 160991 - 102004642 AGCD01071457;AGCD01071458;AGCD01071459;AGCD01071460;AGCD01071461;GBCQ01093107;XM_005411116;XM_005411118;XM_013508089;XM_013508090;XM_013508091;XM_013508092;XM_013508093;XM_013508094;XM_013508095 XP_005411173;XP_005411175;XP_013363543;XP_013363544;XP_013363545;XP_013363546;XP_013363547;XP_013363548;XP_013363549 MODEL 8871740 protein-coding Eif4g3 eukaryotic translation initiation factor 4 gamma 3 ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); positive regulation of meiosis I (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); synapse (ortholog) NW_004955452 1328103 1625341 - 102024417 AGCD01043846;AGCD01043847;AGCD01043848;AGCD01043849;AGCD01043850;AGCD01043851;AGCD01043852;AGCD01043853;GBCE01118471;GBDK01197105;XM_013519508;XM_013519509;XM_013519510;XM_013519511;XM_013519512;XM_013519513;XM_013519514;XM_013519515 XP_013374962;XP_013374963;XP_013374964;XP_013374965;XP_013374966;XP_013374967;XP_013374968;XP_013374969 MODEL 8773820 protein-coding Adcy6 adenylate cyclase 6 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; glucagon signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); microvillus membrane (ortholog) NW_004955500 7635946 7655579 - 102003260 AGCD01063937;AGCD01063938;GBCQ01036618;XM_005406653;XM_005406656;XM_005406657;XM_005406658;XM_005406659 XP_005406710;XP_005406713;XP_005406714;XP_005406715;XP_005406716 MODEL 8756146 protein-coding Cnbd1 cyclic nucleotide binding domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955417 4407737 4783737 + 102008101 AGCD01017946;AGCD01017947;AGCD01017948;AGCD01017949;AGCD01017950;AGCD01017951;AGCD01017952;AGCD01017953;AGCD01017954;AGCD01017955;AGCD01017956;GBDF01226314;XM_005381753 XP_005381810 MODEL 8790185 protein-coding Entrep3 endosomal transmembrane epsin interactor 3 ENCODES a protein that exhibits WW domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955545 1703860 1710120 - 102023398 AGCD01071868;AGCD01071869;GBBH01067051;GBDK01395802;XM_013508339;XM_013508340 XP_013363793;XP_013363794 MODEL 8799943 protein-coding Htr6 5-hydroxytryptamine receptor 6 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); cerebral cortex cell migration (ortholog); G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH Alzheimer's disease (ortholog); amphetamine abuse (ortholog); Memory Disorders (ortholog); FOUND IN cilium (ortholog); dendrite (ortholog); plasma membrane (ortholog) NW_004955452 323641 338312 + 102013466 AGCD01043808;GBCE01082577;XM_005394663 XP_005394720 MODEL 8777419 protein-coding Cd300lg CD300 molecule like family member g ENCODES a protein that exhibits IgM binding (ortholog); INVOLVED IN immunoglobulin transcytosis in epithelial cells (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955451 17098094 17121320 + 102005098 AGCD01043717;AGCD01043718;AGCD01043719;AGCD01043720;GBDK01001371;XM_005394643 XP_005394700 MODEL 9066394 protein-coding Dlg3 discs large MAGUK scaffold protein 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN establishment of planar polarity (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); neurotransmitter receptor transport to postsynaptic membrane (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); brain disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955475 9992888 10056197 + 102024998 AGCD01055080;AGCD01055081;AGCD01055082;GBDI01210941;XM_005401627;XM_005401628;XM_005401629;XM_005401630;XM_005401631;XM_005401632;XM_005401633 XP_005401684;XP_005401685;XP_005401686;XP_005401687;XP_005401688;XP_005401689;XP_005401690 MODEL 8886949 protein-coding Etaa1 ETAA1 activator of ATR kinase ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2/M transition checkpoint (ortholog); positive regulation of protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nuclear replication fork (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955424 17271690 17321276 - 102025480 AGCD01024759;GBDF01261344;XM_005385677;XM_005385678;XR_001234226;XR_001234227;XR_001234228;XR_001234229;XR_001234230;XR_001234231;XR_001234232;XR_001234233;XR_001234234;XR_001234235;XR_001234236;XR_001234237;XR_261075 XP_005385734;XP_005385735 MODEL 9046730 protein-coding LOC102012905 tektin-4-like NW_004955442 16149329 16154459 + 102012905 AGCD01037891;AGCD01037892;GBDF01003534;XM_005391594 XP_005391651 MODEL 8746877 protein-coding Ano8 anoctamin 8 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); high grade glioma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955524 903750 912827 + 102008024 AGCD01068725;GBDI01261021;XM_005409528;XM_013507240 XP_005409585;XP_013362694 MODEL 8740920 protein-coding LOC102009376 olfactory receptor 13J1 NW_004955472 452846 454056 + 102009376 AGCD01053339;XM_005401175 XP_005401232 MODEL 8865603 protein-coding Cep76 centrosomal protein 76 INVOLVED IN regulation of centriole replication (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) NW_004955402 870090 888577 + 102009667 AGCD01000036;AGCD01000037;GBDF01084600;XM_005372555 XP_005372612 MODEL 8940705 protein-coding LOC102009755 pre-mRNA-processing factor 6 NW_004955528 243869 278279 - 102009755 AGCD01069519;AGCD01069520;AGCD01069521;AGCD01069522;AGCD01069523;GBCQ01156965;XM_013507476;XM_013507477;XM_013507478;XM_013507479;XM_013507480;XM_013507481 XP_013362930;XP_013362931;XP_013362932;XP_013362933;XP_013362934;XP_013362935 MODEL 9030175 protein-coding Fem1b fem-1 homolog B ENCODES a protein that exhibits death receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN branching involved in prostate gland morphogenesis (ortholog); epithelial cell maturation (ortholog); epithelial cell maturation involved in prostate gland development (ortholog); ASSOCIATED WITH pheochromocytoma/paraganglioma syndrome 1 (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 7834487 7847334 - 102021614 AGCD01042549;AGCD01042550;GBCB01087486;GBDJ01031831;XM_005393677 XP_005393734 MODEL 8709367 protein-coding Alx3 ALX homeobox 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); embryonic hindlimb morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH frontonasal dysplasia (ortholog); frontonasal dysplasia 1 (ortholog); genetic disease (ortholog) NW_004955435 13584129 13594316 - 102015236 AGCD01033205;GBDF01222447;XM_005388911 XP_005388968 MODEL 39131414 protein-coding KCP kielin cysteine rich BMP regulator 39131898 rrna 5S_rRNA 5S ribosomal RNA 9010934 protein-coding LOC102008619 E3 ISG15--protein ligase HERC5-like NW_004955474 12020037 12065002 - 102008619 AGCD01054645;AGCD01054646;GBBH01011708;GBCE01069694;XM_013502751 XP_013358205 MODEL 39133830 misc_rna 7SK 7SK RNA 8950005 pseudo LOC102010540 Golgi apparatus membrane protein TVP23 homolog B pseudogene NW_004955403 54262808 54264290 + 102010540 AGCD01003090 MODEL 8981152 protein-coding Abca5 ATP binding cassette subfamily A member 5 INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN late endosome (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955478 3526376 3586811 + 102023149 AGCD01055825;AGCD01055826;AGCD01055827;GBCE01049814;GBCE01049815;XM_013503232 XP_013358686 MODEL 8700907 protein-coding LOC102003927 PRAME family member 20-like NW_004955615 78379 80979 - 102003927 AGCD01077249;XM_013510138 XP_013365592 MODEL 9034454 protein-coding Alx4 ALX homeobox 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); HMG box domain binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); digestive tract development (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH Adenomatous Polyps (ortholog); bronchiolo-alveolar adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955422 3278615 3290799 + 102008120 AGCD01022507;GBCE01174422;XM_005384945 XP_005385002 MODEL 8942198 protein-coding LOC102008255 steroid 21-hydroxylase ENCODES a protein that exhibits 17-hydroxyprogesterone 21-hydroxylase activity (ortholog); heme binding (ortholog); progesterone 21-hydroxylase activity (ortholog); INVOLVED IN C21-steroid hormone biosynthetic process (ortholog); cellular response to peptide hormone stimulus (ortholog); cortisol biosynthetic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955437 513052 516792 + 102008255 AGCD01034140;GBCE01017755;XM_005389407 XP_005389464 MODEL 39131762 rrna 5S_rRNA 5S ribosomal RNA 8928438 protein-coding Igfbp7 insulin like growth factor binding protein 7 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); Burns (ortholog); FOUND IN extracellular region (ortholog) NW_004955447 14048834 14110264 + 102005194 AGCD01040979;GBCB01003373;GBDK01007633;XM_013518518 XP_013373972 MODEL 8802708 protein-coding LOC102004649 N-formyl peptide receptor 2-like NW_004955558 759900 765019 - 102004649 AGCD01073389;XM_013508846 XP_013364300 MODEL 8764493 ncrna LOC102017803 uncharacterized LOC102017803 NW_004955510 6353074 6359985 - 102017803 AGCD01066305;GBCQ01116243;XR_264413 MODEL 39134229 misc_rna 7SK 7SK RNA 8843298 protein-coding Ccdc89 coiled-coil domain containing 89 NW_004955414 7197533 7200234 + 102017973 AGCD01014950;GBDF01124462;XM_005379768 XP_005379825 MODEL 8824130 protein-coding Calm1 calmodulin 1 ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog) NW_004955438 12842437 12854028 + 102013544 AGCD01035274;AGCD01035275;GBDJ01024189;XM_005390283 XP_005390340 MODEL 8837022 protein-coding Cdk2ap1 cyclin dependent kinase 2 associated protein 1 ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN face morphogenesis (ortholog); in utero embryonic development (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955482 5588683 5593896 + 102021011 AGCD01057343;GBBH01033326;GBDJ01088754;XM_013503557 XP_013359011 MODEL 9064688 protein-coding Atxn2l ataxin 2 like INVOLVED IN mRNA metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955493 6626106 6637678 - 102017248 AGCD01061122;GBCQ01042325;GBDI01008267;XM_013504810;XM_013504811;XM_013504812;XM_013504813;XR_001231274 XP_013360264;XP_013360265;XP_013360266;XP_013360267 MODEL 8895838 protein-coding Lman2l lectin, mannose binding 2 like INVOLVED IN protein transport (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 69 (ortholog); autosomal recessive intellectual developmental disorder 52 (ortholog); bipolar disorder (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955470 4080723 4100662 - 102019161 AGCD01052717;AGCD01052718;GBDF01157284;XM_005400667;XM_005400668 XP_005400724;XP_005400725 MODEL 8777635 pseudo LOC102011308 protein slowmo homolog 2 pseudogene NW_004955415 30282254 30283847 + 102011308 AGCD01016660 MODEL 9042568 protein-coding Agxt alanine--glyoxylate and serine--pyruvate aminotransferase ENCODES a protein that exhibits amino acid binding (ortholog); identical protein binding (ortholog); L-alanine:glyoxylate transaminase activity (ortholog); INVOLVED IN glycine biosynthetic process (ortholog); glyoxylate catabolic process (ortholog); glyoxylate metabolic process (ortholog); PARTICIPATES IN alanine metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Acidoses (ortholog); atrioventricular block (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955542 710506 720564 - 102013449 AGCD01071475;GBDK01025977;XM_005411147 XP_005411204 MODEL 9030578 protein-coding Chgb chromogranin B ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); prostate cancer (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) NW_004955415 16311769 16324962 + 102014891 AGCD01016376;GBDI01355443;XM_005380843 XP_005380900 MODEL 8873443 protein-coding Inha inhibin subunit alpha ENCODES a protein that exhibits inhibin binding (ortholog); protein sequestering activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN hemoglobin biosynthetic process (ortholog); male gonad development (ortholog); negative regulation of activin receptor signaling pathway (ortholog); ASSOCIATED WITH dysgerminoma (ortholog); embryonal carcinoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN extracellular region (ortholog); inhibin A complex (ortholog); inhibin B complex (ortholog) NW_004955453 13902443 13905008 - 102030150 AGCD01044854;GBDJ01080673;XM_005395512 XP_005395569 MODEL 8877031 protein-coding Grip2 glutamate receptor interacting protein 2 ENCODES a protein that exhibits glutamate receptor binding (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); neurotransmitter receptor transport, endosome to postsynaptic membrane (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); dendritic shaft (ortholog) NW_004955429 17132520 17177547 - 102006936 AGCD01028846;GBDJ01115039;XM_005387067;XM_013515423;XM_013515424;XM_013515425;XM_013515426;XM_013515427;XM_013515428 XP_005387124;XP_013370877;XP_013370878;XP_013370879;XP_013370880;XP_013370881;XP_013370882 MODEL 126903047 protein-coding C17orf114 chromosome 17 open reading frame 114 8831046 protein-coding Commd8 COMM domain containing 8 ASSOCIATED WITH Arachnodactyly (ortholog); atrial heart septal defect (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955443 1098053 1108873 + 102028908 AGCD01038128;GBDF01125836;XM_005391894 XP_005391951 MODEL 8710139 protein-coding Jrk Jrk helix-turn-helix protein ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); childhood absence epilepsy (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) NW_004955454 1415811 1423705 - 102019566 AGCD01044968;GBDI01323657;XM_005395734;XM_013520234;XM_013520235 XP_005395791;XP_013375688;XP_013375689 MODEL 8906918 protein-coding LOC102005692 myosin-8 NW_004955467 6760351 6787249 + 102005692 AGCD01051422;AGCD01051423;GBBH01072423;GBCB01079090;XM_013522113 XP_013377567 MODEL 39133962 misc_rna 7SK 7SK RNA 8782842 ncrna LOC102011744 uncharacterized LOC102011744 NW_004955459 4423019 4424874 - 102011744 AGCD01048026;GBDF01144191;XR_263015 MODEL 8962046 protein-coding Ckmt2 creatine kinase, mitochondrial 2 ENCODES a protein that exhibits cardiolipin binding (ortholog); INVOLVED IN heart development (ortholog); skeletal muscle tissue development (ortholog); FOUND IN mitochondrion (ortholog) NW_004955418 28909999 28929109 - 102013721 AGCD01019447;AGCD01019448;GBDI01007315;XM_005382313;XM_013513078 XP_005382370;XP_013368532 MODEL 8982705 protein-coding Etf1 eukaryotic translation termination factor 1 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); sequence-specific mRNA binding (ortholog); translation release factor activity (ortholog); INVOLVED IN protein methylation (ortholog); regulation of translational termination (ortholog); translational termination (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); nucleus (ortholog) NW_004955418 1943233 1974241 + 102025793 AGCD01018735;GBDF01005274;XM_005382097;XM_005382099;XM_013512964 XP_005382154;XP_005382156;XP_013368418 MODEL 8800239 pseudo LOC102004286 prickle-like protein 1 pseudogene NW_004955420 23753712 23754662 - 102004286 AGCD01021255 MODEL 8782102 protein-coding Arap2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955443 10537763 10719329 + 102012588 AGCD01038379;AGCD01038380;AGCD01038381;AGCD01038382;AGCD01038383;GBBH01146116;XM_005392016;XM_005392017;XM_005392018;XM_005392019;XM_013518104 XP_005392073;XP_005392074;XP_005392075;XP_005392076;XP_013373558 MODEL 9059329 protein-coding Kctd1 potassium channel tetramerization domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH dental radicular dysplasia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleus (ortholog) NW_004955402 14478702 14573154 - 102014191 AGCD01000431;AGCD01000432;GBDJ01018565;XM_005372731;XM_013505731 XP_005372788;XP_013361185 MODEL 15036857 trna Trnad-auc transfer RNA aspartic acid (anticodon AUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978828 8707171 pseudo LOC102007137 glucose-6-phosphatase 3 pseudogene NW_004955503 444692 461910 + 102007137 AGCD01064504 MODEL 8876359 protein-coding Ggact gamma-glutamylamine cyclotransferase ENCODES a protein that exhibits gamma-glutamylaminecyclotransferase activity (ortholog); INVOLVED IN modified amino acid catabolic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955404 10280013 10316531 + 102007496 AGCD01003377;AGCD01003378;GBDF01276939;XM_005374044;XM_005374045;XM_005374046;XM_005374047;XM_005374048;XM_005374049;XM_005374050;XM_005374051;XM_013516034;XM_013516040;XM_013516046 XP_005374101;XP_005374102;XP_005374103;XP_005374104;XP_005374105;XP_005374106;XP_005374107;XP_005374108;XP_013371488;XP_013371494;XP_013371500 MODEL 8857278 protein-coding Acot11 acyl-CoA thioesterase 11 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); response to cold (ortholog); response to temperature stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) NW_004955464 4741504 4782383 - 102028066 AGCD01049994;GBBH01110409;XM_005398521;XM_005398524;XM_013521712;XM_013521713 XP_005398578;XP_005398581;XP_013377166;XP_013377167 MODEL 8777890 ncrna LOC102021894 uncharacterized LOC102021894 NW_004955424 22221862 22225679 - 102021894 AGCD01024945;AGCD01024946;GBDI01244494;XR_261100 MODEL 8931610 protein-coding Edn3 endothelin 3 ENCODES a protein that exhibits endothelin B receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); axon extension (ortholog); axon guidance (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Ataxia (ortholog); Bradycardia (ortholog); congenital central hypoventilation syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955445 215910 238153 - 102016530 AGCD01039306;GBDK01184690;XM_005392203;XM_005392204 XP_005392260;XP_005392261 MODEL 8851566 protein-coding LOC102010542 toll-like receptor 12 NW_004955452 11635179 11638291 + 102010542 AGCD01044342;GBDK01385301;XM_013519712 XP_013375166 MODEL 8995011 protein-coding Adcy7 adenylate cyclase 7 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); diadenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955433 8362957 8428773 + 102015882 AGCD01031591;AGCD01031592;AGCD01031593;GBDK01005020;XM_005388269;XM_013516211;XM_013516212;XM_013516213;XM_013516214;XM_013516215;XM_013516216 XP_005388326;XP_013371665;XP_013371666;XP_013371667;XP_013371668;XP_013371669;XP_013371670 MODEL 9038886 protein-coding LOC102006793 melanoma-associated antigen 10-like NW_004955498 6957142 6971415 - 102006793 AGCD01063139;GBDF01251928;XM_005406437;XM_013505537;XM_013505538 XP_005406494;XP_013360991;XP_013360992 MODEL 8833280 protein-coding Eny2 ENY2 transcription and export complex 2 subunit ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); poly(A)+ mRNA export from nucleus (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN DUBm complex (ortholog); nuclear pore nuclear basket (ortholog); SAGA complex (ortholog) NW_004955417 16750563 16760839 + 102022081 AGCD01018273;GBDF01088991;XM_005381877;XM_005381878 XP_005381934;XP_005381935 MODEL 39131497 protein-coding CD302 CD302 molecule 39134231 misc_rna 7SK 7SK RNA 8703103 protein-coding Htr7 5-hydroxytryptamine receptor 7 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); neurotransmitter receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); behavioral response to pain (ortholog); detection of mechanical stimulus involved in sensory perception of pain (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH alcohol use disorder (ortholog); amnestic disorder (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); cilium (ortholog); dendrite (ortholog) NW_004955425 2321420 2420420 + 102012876 AGCD01025258;AGCD01025259;AGCD01025260;AGCD01025261;AGCD01025262;AGCD01025263;GBDF01050691;GBDF01050693;XM_005385841;XM_005385842;XM_005385844 XP_005385898;XP_005385899;XP_005385901 MODEL 8811919 ncrna LOC102009377 uncharacterized LOC102009377 NW_004955474 7388629 7400816 + 102009377 AGCD01054519;GBDF01303398;XR_001230720;XR_263601 MODEL 8749312 protein-coding Ano9 anoctamin 9 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); chloride channel inhibitor activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955476 11588043 11603027 + 102023258 AGCD01055466;GBBH01197736;XM_005401864 XP_005401921 MODEL 9060518 protein-coding Dlg4 discs large MAGUK scaffold protein 4 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); beta-1 adrenergic receptor binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to potassium ion (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell junction (ortholog); cell periphery (ortholog) NW_004955467 9691733 9715872 + 102028518 AGCD01051521;GBDF01116423;XM_005399548;XM_005399550;XM_005399551;XM_005399553;XM_005399554;XM_005399555;XM_005399556;XM_013522090;XM_013522091;XM_013522092;XM_013522094 XP_005399605;XP_005399607;XP_005399608;XP_005399610;XP_005399611;XP_005399612;XP_005399613;XP_013377544;XP_013377545;XP_013377546;XP_013377548 MODEL 8762834 ncrna LOC102009756 uncharacterized LOC102009756 NW_004955437 596440 600236 + 102009756 AGCD01034150;AGCD01034151;GBDF01305486;XR_261820 MODEL 8815764 protein-coding Cblif cobalamin binding intrinsic factor ENCODES a protein that exhibits cargo receptor ligand activity (ortholog); cobalamin binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN cobalamin transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); extracellular region (ortholog) NW_004955511 4234470 4251583 - 102013320 AGCD01066496;GBDI01027880;XM_005408068;XM_005408071;XM_005408072;XM_013506347;XM_013506348 XP_005408125;XP_005408128;XP_005408129;XP_013361801;XP_013361802 MODEL 9058487 protein-coding Ccdc9 coiled-coil domain containing 9 ENCODES a protein that exhibits RNA binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN exon-exon junction complex (ortholog) NW_004955574 1190611 1203274 + 102007063 AGCD01075164;GBDI01121830;GBDJ01084028;XM_013509529;XM_013509530;XM_013509531;XM_013509532;XM_013509533;XM_013509534;XM_013509535 XP_013364983;XP_013364984;XP_013364985;XP_013364986;XP_013364987;XP_013364988;XP_013364989 MODEL 8797130 protein-coding Fem1c fem-1 homolog C ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Hereditary Neoplastic Syndromes (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) NW_004955408 35291791 35315628 - 102023006 AGCD01008937;GBDF01003668;XM_013506925 XP_013362379 MODEL 39133832 misc_rna 7SK 7SK RNA 8855176 protein-coding Agxt2 alanine--glyoxylate aminotransferase 2 ENCODES a protein that exhibits (R)-3-amino-2-methylpropionate:pyruvate transaminase activity (ortholog); beta-alanine:pyruvate transaminase activity (ortholog); L-alanine:glyoxylate transaminase activity (ortholog); INVOLVED IN glycine biosynthetic process (ortholog); glyoxylate catabolic process (ortholog); L-alanine catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Beta-Aminoisobutyric Acid, Urinary Excretion of (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955426 20102368 20142596 - 102006482 AGCD01026563;GBCQ01063829;XM_005386191 XP_005386248 MODEL 8967050 protein-coding Atxn3 ataxin 3 ENCODES a protein that exhibits ATPase binding (ortholog); cysteine-type deubiquitinase activity (ortholog); histone deacetylase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to amino acid starvation (ortholog); cellular response to heat (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cataplexy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955438 14405415 14443457 - 102024385 AGCD01035345;AGCD01035346;GBBH01096128;XM_005390322;XM_013517193;XM_013517194;XM_013517196;XM_013517197;XM_013517198;XR_001235139;XR_261931 XP_005390379;XP_013372647;XP_013372648;XP_013372650;XP_013372651;XP_013372652 MODEL 8819300 ncrna LOC102003928 uncharacterized LOC102003928 NW_004955403 24016583 24021309 + 102003928 AGCD01002266;GBDK01211102;XR_259201 MODEL 8790802 protein-coding Abca6 ATP binding cassette subfamily A member 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); colon adenocarcinoma (ortholog); FOUND IN Golgi membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955478 3639817 3706115 + 102023693 AGCD01055828;AGCD01055829;AGCD01055830;GBCE01081913;XM_005402108;XM_005402109;XM_005402110 XP_005402165;XP_005402166;XP_005402167 MODEL 8914888 ncrna LOC102012908 uncharacterized LOC102012908 NW_004955444 12340446 12343731 - 102012908 AGCD01039069;GBDK01125336;XR_262259 MODEL 8814863 pseudo LOC102004651 protein ELYS-like NW_004955443 9345582 9368751 - 102004651 AGCD01038349;AGCD01038350;AGCD01038351;AGCD01038352 MODEL 8757403 protein-coding Igfbpl1 insulin like growth factor binding protein like 1 INVOLVED IN cellular response to tumor cell (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955419 28133512 28148462 + 102010489 AGCD01020459;AGCD01020460;GBBH01048948;XM_013513091 XP_013368545 MODEL 9065184 protein-coding LOC102017804 vomeronasal type-1 receptor 90-like NW_004955429 12364461 12365522 - 102017804 AGCD01028715;XM_005387247 XP_005387304 MODEL 39131899 rrna 5S_rRNA 5S ribosomal RNA 8745142 protein-coding Cep78 centrosomal protein 78 INVOLVED IN acrosome assembly (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Cone-Rod Dystrophy and Hearing Loss (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955512 1184521 1222143 - 102025035 AGCD01066637;AGCD01066638;GBCC01035800;XM_005408298;XM_013506550 XP_005408355;XP_013362004 MODEL 8956492 pseudo LOC102008621 josephin-1 pseudogene NW_004955477 274210 274810 + 102008621 AGCD01055485 MODEL 9052895 protein-coding Inhba inhibin subunit beta A ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); androgen metabolic process (ortholog); androst-4-ene-3,17-dione biosynthetic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Brain Hypoxia-Ischemia (ortholog); congestive heart failure (ortholog); FOUND IN activin A complex (ortholog); extracellular region (ortholog); inhibin A complex (ortholog) NW_004955460 2054879 2066628 + 102015383 AGCD01048386;GBDJ01189469;XM_005397723 XP_005397780 MODEL 39134232 misc_rna 7SK 7SK RNA 8881916 protein-coding Commd9 COMM domain containing 9 INVOLVED IN cholesterol homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 10149957 10186202 + 102008004 AGCD01022732;AGCD01022733;GBBH01063319;XM_005384118;XM_005384119;XM_005384120;XM_013514314 XP_005384175;XP_005384176;XP_005384177;XP_013369768 MODEL 9063969 protein-coding Eif4h eukaryotic translation initiation factor 4H INVOLVED IN developmental growth (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955456 13699012 13710065 - 102019472 AGCD01046612;GBCB01007540;XM_013520517 XP_013375971 MODEL 8966209 protein-coding Calm2 calmodulin 2 ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); cannabis abuse (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog) NW_004955441 13973147 13988665 - 102017710 AGCD01037166;AGCD01037167;AGCD01037168;GBBH01002477;GBDF01001010;XM_005391051 XP_005391108 MODEL 39133963 misc_rna 7SK 7SK RNA 8900487 protein-coding Anos1 anosmin 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Delayed Puberty (ortholog); Developmental Disabilities (ortholog); FOUND IN extracellular region (ortholog) NW_004955499 6486287 6686739 - 102026654 AGCD01063547;AGCD01063548;AGCD01063549;AGCD01063550;AGCD01063551;AGCD01063552;AGCD01063553;AGCD01063554;GBCE01028302;GBDI01025617;XM_013505608 XP_013361062 MODEL 9026854 protein-coding LOC102011750 interstitial collagenase NW_004955412 5994105 6001239 - 102011750 AGCD01012662;XM_005378615 XP_005378672 MODEL 8756358 protein-coding Cks1b CDC28 protein kinase regulatory subunit 1B INVOLVED IN cell population proliferation (ortholog); mitotic cell cycle phase transition (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955545 1479454 1483474 + 102016751 AGCD01071856;GBDF01085704;XM_005411535 XP_005411592 MODEL 8904441 protein-coding Cnbd2 cyclic nucleotide binding domain containing 2 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); sperm midpiece (ortholog) NW_004955422 25500550 25560937 - 102003884 AGCD01023251;AGCD01023252;AGCD01023253;GBDF01046015;XM_013514074;XM_013514075 XP_013369528;XP_013369529 MODEL 8957778 trna Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978829 AGCD01005333;AGCD01005375;AGCD01023470;AGCD01049456;AGCD01050593;AGCD01051466;AGCD01057309 MODEL 39131763 rrna 5S_rRNA 5S ribosomal RNA 8818553 pseudo LOC102007145 zinc finger protein OZF-like NW_004955431 11381806 11382456 + 102007145 AGCD01030233 MODEL 8947304 protein-coding Alyref Aly/REF export factor ENCODES a protein that exhibits C5-methylcytidine-containing RNA reader activity (ortholog); molecular adaptor activity (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA metabolic process (ortholog); RNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955506 1278230 1282064 + 102025269 AGCD01065254;AGCD01065255;GBDF01049120;XM_013506125 XP_013361579 MODEL 8763126 protein-coding Ggct gamma-glutamylcyclotransferase ENCODES a protein that exhibits gamma-glutamylcyclotransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN release of cytochrome c from mitochondria (ortholog); PARTICIPATES IN glutathione metabolic pathway; glutathione synthase deficiency pathway; glutathionuria disease pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955410 31732272 31739020 - 102020538 AGCD01011331;GBDI01325753;XM_005377500 XP_005377557 MODEL 8787693 protein-coding Chi3l1 chitinase 3 like 1 ENCODES a protein that exhibits chitin binding (ortholog); chitinase activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); inflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955406 39195101 39201808 - 102008059 AGCD01006621;GBBH01100979;XM_005375251 XP_005375308 MODEL 8792445 protein-coding Ednra endothelin receptor type A ENCODES a protein that exhibits endothelin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); aorta development (ortholog); PARTICIPATES IN endothelin signaling pathway; inflammatory response pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog); T-tubule (ortholog) NW_004955428 3062303 3114761 + 102011786 AGCD01027648;GBCE01097518;XM_005386667 XP_005386724 MODEL 9012389 ncrna LOC102006794 uncharacterized LOC102006794 NW_004955426 2684376 2772914 - 102006794 AGCD01026053;AGCD01026054;XR_261179 MODEL 8763367 protein-coding Gripap1 GRIP1 associated protein 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN negative regulation of protein localization (ortholog); negative regulation of receptor clustering (ortholog); regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN dendrite (ortholog); early endosome membrane (ortholog); extrinsic component of postsynaptic early endosome membrane (ortholog) NW_004955543 500340 527243 - 102029795 AGCD01071587;GBBH01163812;XM_005411297;XM_005411298;XM_005411300;XM_005411301;XM_005411302;XM_013508155;XM_013508156 XP_005411354;XP_005411355;XP_005411357;XP_005411358;XP_005411359;XP_013363609;XP_013363610 MODEL 8864384 protein-coding C1d C1D nuclear receptor corepressor ENCODES a protein that exhibits DNA binding (ortholog); nuclear receptor binding (ortholog); RNA binding (ortholog); INVOLVED IN maturation of 5.8S rRNA (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955424 16787094 16801600 + 102024132 AGCD01024753;GBDF01045582;XM_013514751 XP_013370205 MODEL 9018128 protein-coding Cdk2ap2 cyclin dependent kinase 2 associated protein 2 INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of microtubule cytoskeleton organization (ortholog); regulation of stem cell division (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); microtubule (ortholog); nucleus (ortholog) NW_004955422 17981267 17983480 + 102014059 AGCD01022933;GBBH01034591;XM_005384312;XM_005384313;XM_013514086 XP_005384369;XP_005384370;XP_013369540 MODEL 8977057 pseudo LOC102017808 DEP domain-containing protein 1B-like NW_004955434 20258595 20259982 - 102017808 AGCD01032614 MODEL 8744935 protein-coding Cd320 CD320 molecule ENCODES a protein that exhibits calcium ion binding (ortholog); cargo receptor activity (ortholog); cobalamin binding (ortholog); INVOLVED IN B cell costimulation (ortholog); cobalamin transport (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); methylmalonic acidemia due to transcobalamin receptor defect (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955563 1084523 1089395 + 102015784 AGCD01074112;GBBH01139570;XM_005413134;XM_013509154 XP_005413191;XP_013364608 MODEL 8819305 pseudo LOC102004287 S-phase kinase-associated protein 1 pseudogene NW_004955421 10942295 10942798 - 102004287 AGCD01021885 MODEL 8901801 protein-coding Lmbr1 limb development membrane protein 1 INVOLVED IN embryonic digit morphogenesis (ortholog); ASSOCIATED WITH acheiropody (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955491 9171462 9217996 - 102007669 AGCD01060625;GBDF01053045;GBDJ01006296;XM_005404906 XP_005404963 MODEL 8733562 protein-coding LOC102009757 ubiquinol-cytochrome-c reductase complex assembly factor 2 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); positive regulation of mitochondrial translation (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 7 (ortholog); FOUND IN Cbp3p-Cbp6 complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955437 2107475 2119892 - 102009757 AGCD01034260;GBDF01065831;XM_005389507 XP_005389564 MODEL 8961424 protein-coding Etfa electron transfer flavoprotein subunit alpha ENCODES a protein that exhibits electron transfer activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); genetic disease (ortholog); glutaric acidemia type 3 (ortholog); FOUND IN electron transfer flavoprotein complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955450 1392526 1451591 - 102017080 AGCD01042364;GBDF01121130;XM_005393471 XP_005393528 MODEL 10131119 ncrna LOC106149969 uncharacterized LOC106149969 NW_004955458 3721704 3723206 - 106149969 AGCD01047340;GBDF01065268;XR_001236465 MODEL 8805710 protein-coding Fen1 flap structure-specific endonuclease 1 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-flap endonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); DNA replication (ortholog); DNA replication, removal of RNA primer (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); autoimmune disease (ortholog); breast cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955511 5918667 5922506 - 102008650 AGCD01066592;GBCQ01122297;XM_005408136 XP_005408193 MODEL 8888349 protein-coding Kctd10 potassium channel tetramerization domain containing 10 ENCODES a protein that exhibits identical protein binding (ortholog); Notch binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cilium assembly (ortholog); establishment of endothelial barrier (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); MKS complex (ortholog); nucleoplasm (ortholog) NW_004955455 9032697 9064827 + 102020527 AGCD01045914;GBDF01080288;XM_005396451;XM_005396452 XP_005396508;XP_005396509 MODEL 8795307 protein-coding Arap3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of Rac protein signal transduction (ortholog); negative regulation of Rho protein signal transduction (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog); ruffle (ortholog) NW_004955415 12098009 12121722 + 102003649 AGCD01016184;AGCD01016185;GBDK01075561;XM_005380719;XM_005380720;XM_005380721;XM_005380722;XM_013512253 XP_005380776;XP_005380777;XP_005380778;XP_005380779;XP_013367707 MODEL 8806604 protein-coding Acot12 acyl-CoA thioesterase 12 ENCODES a protein that exhibits acetyl-CoA hydrolase activity (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); acyl-CoA metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); liver cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955418 28829316 28872629 + 102012861 AGCD01019445;GBCQ01154601;XM_005382310 XP_005382367 MODEL 9040298 protein-coding Ahctf1 AT-hook containing transcription factor 1 INVOLVED IN nuclear pore complex assembly (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); kinetochore (ortholog) NW_004955406 9687237 9754426 - 102012156 AGCD01005831;AGCD01005832;AGCD01005833;AGCD01005834;GBDF01053229;XM_005374795;XM_013520457;XM_013520466 XP_005374852;XP_013375911;XP_013375920 MODEL 8758835 protein-coding LOC102008260 PDZ domain-containing protein MAGIX NW_004955543 651286 655627 + 102008260 AGCD01071596;GBCE01116897;XM_005411322;XM_013508147;XM_013508148 XP_005411379;XP_013363601;XP_013363602 MODEL 9041808 protein-coding Eogt EGF domain specific O-linked N-acetylglucosamine transferase ENCODES a protein that exhibits protein O-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 4 (ortholog) NW_004955421 18845626 18879008 + 102013835 AGCD01022058;AGCD01022059;GBDJ01390366;XM_005383814;XM_005383815;XM_013513795 XP_005383871;XP_005383872;XP_013369249 MODEL 8720757 protein-coding Amacr alpha-methylacyl-CoA racemase ENCODES a protein that exhibits alpha-methylacyl-CoA racemase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH adenoma (ortholog); alpha-methylacyl-CoA racemase deficiency (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); peroxisome (ortholog) NW_004955426 19570179 19580920 - 102028990 AGCD01026549;GBCB01061062;XM_005386170;XM_005386171 XP_005386227;XP_005386228 MODEL 8802923 pseudo LOC102011311 methionine aminopeptidase 2 pseudogene NW_004955416 12398435 12418557 - 102011311 AGCD01017205;AGCD01017206 MODEL 8863548 protein-coding Ccdc90b coiled-coil domain containing 90B ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955414 9329210 9349875 + 102025676 AGCD01015018;AGCD01015019;GBDF01120296;XM_005379796 XP_005379853 MODEL 8774319 protein-coding Comt catechol-O-methyltransferase ENCODES a protein that exhibits catechol O-methyltransferase activity (ortholog); INVOLVED IN positive regulation of lactation; artery development (ortholog); behavioral fear response (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Acute Pain (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cell body; extracellular region; glial cell projection NW_004955442 18130282 18152153 - 102028906 AGCD01037997;AGCD01037998;GBDF01121489;XM_005391754;XM_013517802 XP_005391811;XP_013373256 MODEL 8770277 protein-coding Eif5 eukaryotic translation initiation factor 5 ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); formation of translation preinitiation complex (ortholog); regulation of translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955538 2226493 2233275 + 102008982 AGCD01071110;GBDF01008662;XM_005410773 XP_005410830 MODEL 8929279 pseudo LOC102010543 ferritin light chain pseudogene NW_004955405 19953476 19961761 - 102010543 AGCD01005050 MODEL 8885922 protein-coding LOC102021895 melanoma-associated antigen 8-like NW_004955498 3686475 3687449 + 102021895 AGCD01062922;XM_005406479 XP_005406536 MODEL 39133834 misc_rna 7SK 7SK RNA 9018182 protein-coding Anp32a acidic nuclear phosphoprotein 32 family member A ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); INVOLVED IN negative regulation of plasma membrane bounded cell projection assembly (ortholog); negative regulation of protein modification process (ortholog); nucleocytoplasmic transport (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Animal Disease Models (ortholog); Brain Injuries (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 7449368 7484524 + 102018788 AGCD01042538;GBDJ01127727;XM_005393670;XM_005393671 XP_005393727;XP_005393728 MODEL 8919715 ncrna LOC102012909 uncharacterized LOC102012909 NW_004955445 3519216 3530963 + 102012909 AGCD01039396;GBDF01083032;XR_262300 MODEL 8840223 protein-coding Igflr1 IGF like family receptor 1 ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 2806612 2812751 + 102018710 AGCD01051838;GBCE01043528;XM_013522291 XP_013377745 MODEL 9000065 pseudo LOC102005693 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955413 21622743 21623904 - 102005693 AGCD01014258 MODEL 8815011 pseudo LOC102009380 40S ribosomal protein S8 pseudogene NW_004955415 27385133 27385744 + 102009380 AGCD01016630 MODEL 8711878 pseudo LOC102006795 nuclear receptor subfamily 5 group A member 2 pseudogene NW_004955503 337968 338545 + 102006795 AGCD01064497 MODEL 39131900 rrna 5S_rRNA 5S ribosomal RNA 8830067 protein-coding Dlg5 discs large MAGUK scaffold protein 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN apical protein localization (ortholog); epithelial to mesenchymal transition (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); cell junction (ortholog) NW_004955437 14510488 14628768 + 102021484 AGCD01034676;AGCD01034677;AGCD01034678;GBBH01115032;GBDF01192616;XM_005389900;XM_005389902 XP_005389957;XP_005389959 MODEL 39134233 misc_rna 7SK 7SK RNA 8742801 protein-coding Cbll1 Cbl proto-oncogene like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); mRNA processing (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955410 12078448 12093641 + 102006988 AGCD01010844;GBDF01189707;XM_005377287;XM_005377288;XM_013510644;XM_013510645 XP_005377344;XP_005377345;XP_013366098;XP_013366099 MODEL 8987439 protein-coding Grk1 G protein-coupled receptor kinase 1 ENCODES a protein that exhibits rhodopsin kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); photoreceptor cell morphogenesis (ortholog); positive regulation of phosphorylation (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); congenital stationary night blindness (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); photoreceptor outer segment (ortholog) NW_004955404 343009 353683 - 102029694 AGCD01003199;XM_005373936 XP_005373993 MODEL 39133964 misc_rna 7SK 7SK RNA 9025655 protein-coding Inhbb inhibin subunit beta B ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); cellular response to calcium ion (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH Brain Death (ortholog); congenital hypothyroidism (ortholog); familial male-limited precocious puberty (ortholog); FOUND IN cell periphery (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955459 9482998 9488489 - 102008066 AGCD01048158;GBCE01049899;GBDK01360992;XM_013521093 XP_013376547 MODEL 8881749 protein-coding Cd34 CD34 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); sulfate binding (ortholog); INVOLVED IN cell motility (ortholog); cell-cell adhesion (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); diabetic retinopathy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); cell periphery (ortholog) NW_004955406 43116688 43130405 - 102007734 AGCD01006725;GBBH01118869;GBDK01134864;XM_005375443 XP_005375500 MODEL 8988367 pseudo LOC102011759 coiled-coil domain-containing protein 117 pseudogene NW_004955414 22445100 22446162 - 102011759 AGCD01015456 MODEL 8724839 protein-coding Cks2 CDC28 protein kinase regulatory subunit 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cell population proliferation (ortholog); meiosis I (ortholog); mitotic cell cycle phase transition (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955515 2731210 2736296 - 102017372 AGCD01067260;GBDF01007976;XM_005408880 XP_005408937 MODEL 8761047 ncrna LOC102003929 uncharacterized LOC102003929 NW_004955758 2514 8463 + 102003929 AGCD01078291;GBCB01086463;XR_001232596;XR_001232597 MODEL 8865526 protein-coding LOC102007148 putative spermatogenesis-associated protein 31D4 NW_004955434 10580926 10593113 + 102007148 AGCD01032355;GBDF01001033;XM_005388673 XP_005388730 MODEL 8993925 trna Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955418;NW_004955445;NW_004955465 63038;29926685;16045097;13921469 63109;29926756;16045169;13921540 -;+;+;+ 101978831 AGCD01019491;AGCD01039863;AGCD01050636;AGCD01074502 MODEL 8734967 protein-coding Cnbp CCHC-type zinc finger nucleic acid binding protein ENCODES a protein that exhibits G-quadruplex DNA binding (ortholog); single-stranded DNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN G-quadruplex DNA formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955429 13537222 13582026 - 102011136 AGCD01028753;AGCD01028754;AGCD01028755;GBDF01002143;XM_005386996;XM_005386998;XM_013515376 XP_005387053;XP_005387055;XP_013370830 MODEL 8979413 protein-coding Kctd11 potassium channel tetramerization domain containing 11 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of neuroblast proliferation (ortholog); negative regulation of smoothened signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) NW_004955467 9564905 9567020 - 102017971 AGCD01051518;GBBH01025470;XM_005399508 XP_005399565 MODEL 8824148 protein-coding Abca7 ATP binding cassette subfamily A member 7 ENCODES a protein that exhibits apolipoprotein A-I receptor activity (ortholog); ATPase-coupled intramembrane lipid carrier activity (ortholog); floppase activity (ortholog); INVOLVED IN amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta formation (ortholog); apolipoprotein A-I-mediated signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Alzheimer's disease 9 (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955495 6818002 6838177 - 102013842 AGCD01062097;GBBH01062757;XM_013505096;XM_013505097;XM_013505098;XM_013505099;XM_013505100;XM_013505101;XM_013505102 XP_013360550;XP_013360551;XP_013360552;XP_013360553;XP_013360554;XP_013360555;XP_013360556 MODEL 9054134 protein-coding LOC102004653 olfactory receptor 7G2-like NW_004955563 384107 385063 - 102004653 AGCD01074064;XM_005413097 XP_005413154 MODEL 8926538 protein-coding Ggcx gamma-glutamyl carboxylase ENCODES a protein that exhibits gamma-glutamyl carboxylase activity (ortholog); vitamin binding (ortholog); INVOLVED IN lung growth (ortholog); negative regulation of bone development (ortholog); negative regulation of neurotransmitter secretion (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); antithrombin III deficiency (ortholog); arteriovenous malformation (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 1926924 1952635 + 102029413 AGCD01024252;GBDK01013035;XM_005385426;XM_005385427 XP_005385483;XP_005385484 MODEL 8979645 protein-coding Chic1 cysteine rich hydrophobic domain 1 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955591 581415 659840 + 102029575 AGCD01076275;AGCD01076276;AGCD01076277;GBDF01066444;XM_005414595;XM_005414596;XM_005414597 XP_005414652;XP_005414653;XP_005414654 MODEL 8959910 protein-coding Acot13 acyl-CoA thioesterase 13 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955483 2360758 2375071 - 102010264 AGCD01057675;GBCQ01010402;XM_005403366 XP_005403423 MODEL 8933510 ncrna LOC102008623 uncharacterized LOC102008623 NW_004955479 10170741 10180244 - 102008623 AGCD01056526;AGCD01056527;GBDI01103470;XR_263739 MODEL 8864407 protein-coding C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); intestinal epithelial cell development (ortholog); kidney development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955432 14298873 14353824 + 102025281 AGCD01031042;GBBH01190693;XM_005388090 XP_005388147 MODEL 8833960 pseudo LOC102017809 LIM/homeobox protein Lhx2 pseudogene NW_004955529 937279 938433 + 102017809 AGCD01069660 MODEL 8956589 protein-coding LOC102012915 uncharacterized LOC102012915 NW_004955450 14986194 14993012 + 102012915 AGCD01042775;GBDF01058226;XM_013518836 XP_013374290 MODEL 8706411 protein-coding Cdk3 cyclin dependent kinase 3 INVOLVED IN DNA damage response (ortholog); G0 to G1 transition (ortholog); negative regulation of Notch signaling pathway (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955506 6247146 6252083 - 102006371 AGCD01065405;GBDF01210937;XM_005407460;XM_005407461;XM_005407462;XM_005407463 XP_005407517;XP_005407518;XP_005407519;XP_005407520 MODEL 8728284 protein-coding Igfn1 immunoglobulin like and fibronectin type III domain containing 1 INVOLVED IN myoblast differentiation (ortholog); myoblast fusion (ortholog); myotube differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog); Z disc (ortholog) NW_004955406 37332936 37363694 + 102010865 AGCD01006574;AGCD01006575;GBCE01003380;XM_005375163;XM_013522126;XM_013522134;XM_013522139;XM_013522143 XP_005375220;XP_013377580;XP_013377588;XP_013377593;XP_013377597 MODEL 8880337 ncrna LOC102004288 uncharacterized LOC102004288 NW_004955422 13815996 13839961 + 102004288 AGCD01022838;AGCD01022839;GBDI01205369;XR_001233902;XR_260874;XR_260875 MODEL 39131765 rrna 5S_rRNA 5S ribosomal RNA 8760506 protein-coding Adcy8 adenylate cyclase 8 ENCODES a protein that exhibits actin binding (ortholog); adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN activation of protein kinase A activity (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); diabetic angiopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955461 5497708 5725574 - 102009359 AGCD01048884;AGCD01048885;GBDF01296763;XM_005398002;XM_005398003;XM_005398004 XP_005398059;XP_005398060;XP_005398061 MODEL 8782196 protein-coding Lmbr1l limb development membrane protein 1 like ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN hematopoietic stem cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); receptor-mediated endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955500 7922422 7934538 - 102014922 AGCD01063960;AGCD01063961;GBBH01209783;GBDK01196940;XM_013505718 XP_013361172 MODEL 9031823 protein-coding Ccdc91 coiled-coil domain containing 91 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN Golgi to lysosome transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); trans-Golgi network (ortholog) NW_004955505 6269667 6613191 - 102016827 AGCD01065168;AGCD01065169;AGCD01065170;AGCD01065171;AGCD01065172;AGCD01065173;AGCD01065174;AGCD01065175;AGCD01065176;AGCD01065177;AGCD01065178;AGCD01065179;AGCD01065180;GBCB01043003;XM_005407144;XM_005407146;XM_005407149;XM_005407150;XM_005407151;XM_013505940;XM_013505941;XM_013505942;XM_013505943;XM_013505944;XM_013505945;XM_013505946;XM_013505947;XM_013505948;XM_013505949 XP_005407201;XP_005407203;XP_005407206;XP_005407207;XP_005407208;XP_013361394;XP_013361395;XP_013361396;XP_013361397;XP_013361398;XP_013361399;XP_013361400;XP_013361401;XP_013361402;XP_013361403 MODEL 8716690 protein-coding LOC102011313 uncharacterized LOC102011313 NW_004955417 26374063 26401589 - 102011313 AGCD01018507;AGCD01018508;AGCD01018509;GBBH01003039;XM_005381923;XM_013512715;XM_013512716;XM_013512717;XM_013512718;XM_013512719;XM_013512720;XM_013512721;XM_013512722;XM_013512723;XM_013512724;XM_013512725;XM_013512726;XM_013512727;XM_013512728;XM_013512729;XM_013512730;XM_013512731;XM_013512732;XM_013512734;XR_001233417;XR_001233418 XP_005381980;XP_013368169;XP_013368170;XP_013368171;XP_013368172;XP_013368173;XP_013368174;XP_013368175;XP_013368176;XP_013368177;XP_013368178;XP_013368179;XP_013368180;XP_013368181;XP_013368182;XP_013368183;XP_013368184;XP_013368185;XP_013368186;XP_013368188 MODEL 10315948 ncrna LOC106149970 uncharacterized LOC106149970 NW_004955458 5549504 5550194 + 106149970 AGCD01047499;GBDF01112323;XR_001236466 MODEL 8740017 pseudo LOC102011763 40S ribosomal protein S24 pseudogene NW_004955478 9920867 9921511 - 102011763 AGCD01056109 MODEL 8972276 protein-coding Htra1 HtrA serine peptidase 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular function activator activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH age related macular degeneration (ortholog); age related macular degeneration 7 (ortholog); aphasia (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955477 761127 808396 + 102009942 AGCD01055495;GBBH01032145;XM_013503081 XP_013358535 MODEL 8872355 protein-coding Fer FER tyrosine kinase ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); lipid binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adherens junction assembly (ortholog); adherens junction disassembly (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cell junction (ortholog) NW_004955418 5612919 5981549 - 102020666 AGCD01018846;AGCD01018847;AGCD01018848;AGCD01018849;AGCD01018850;AGCD01018851;AGCD01018852;AGCD01018853;AGCD01018854;AGCD01018855;AGCD01018856;AGCD01018857;AGCD01018858;AGCD01018859;GBDJ01217631;XM_005382177;XM_005382178;XM_013513026;XM_013513027 XP_005382234;XP_005382235;XP_013368480;XP_013368481 MODEL 8787949 protein-coding Ednrb endothelin receptor type B ENCODES a protein that exhibits endothelin receptor activity (ortholog); peptide hormone binding (ortholog); type 1 angiotensin receptor binding (ortholog); INVOLVED IN aldosterone metabolic process (ortholog); calcium ion transmembrane transport (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase signaling pathway; endothelin signaling pathway; inflammatory response pathway; ASSOCIATED WITH ABCD syndrome (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog) NW_004955404 29394253 29425358 + 102015277 AGCD01003975;GBCQ01024197;XM_005374148 XP_005374205 MODEL 8837124 protein-coding Ahcy adenosylhomocysteinase ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); adenosylselenohomocysteinase activity (ortholog); adenyl nucleotide binding (ortholog); INVOLVED IN chronic inflammatory response to antigenic stimulus (ortholog); circadian sleep/wake cycle (ortholog); modified amino acid catabolic process (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocysteine metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); amino acid metabolic disorder (ortholog); Animal Disease Models (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) NW_004955422 26992295 27013100 + 102024352 AGCD01023310;AGCD01023311;GBBH01000893;XM_005384832 XP_005384889 MODEL 8782775 protein-coding LOC102008265 keratin, type II cuticular Hb6 NW_004955547 2650341 2656801 + 102008265 AGCD01072290;AGCD01072291;GBDF01140560;XM_005411939 XP_005411996 MODEL 8830862 protein-coding Eola1 endothelium and lymphocyte associated ASCH domain 1 INVOLVED IN regulation of gene expression (ortholog); regulation of interleukin-6 production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955498 1911103 1916645 + 102021893 AGCD01062753;GBDJ01129367;XM_005406399 XP_005406456 MODEL 8785587 protein-coding Jrkl JRK like ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955412 1209524 1212911 + 102005349 AGCD01012512;GBCE01108644;GBCQ01176148;XM_005377959 XP_005378016 MODEL 9050103 protein-coding Calm3 calmodulin 3 ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); familial hypertrophic cardiomyopathy (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog) NW_004955574 672441 680924 + 102028035 AGCD01075122;GBCE01060621;GBDK01014277;XM_005413836 XP_005413893 MODEL 8832127 ncrna LOC102006796 uncharacterized LOC102006796 NW_004955427 4093452 4098801 + 102006796 AGCD01026959;GBDF01145084;XR_261228 MODEL 9037106 protein-coding Arb2a ARB2 cotranscriptional regulator A INVOLVED IN neural crest cell development (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955418 18213824 18624082 + 102021346 AGCD01019165;AGCD01019166;AGCD01019167;AGCD01019168;AGCD01019169;AGCD01019170;AGCD01019171;AGCD01019172;AGCD01019173;AGCD01019174;AGCD01019175;AGCD01019176;GBDF01219960;XM_005382263;XM_005382264;XM_005382265;XM_005382267;XM_013512944;XM_013512945;XM_013512947;XM_013512948;XM_013512949;XM_013512950;XM_013512951 XP_005382320;XP_005382321;XP_005382322;XP_005382324;XP_013368398;XP_013368399;XP_013368401;XP_013368402;XP_013368403;XP_013368404;XP_013368405 MODEL 39131902 rrna 5S_rRNA 5S ribosomal RNA 39133965 misc_rna 7SK 7SK RNA 8836503 protein-coding Grk2 G protein-coupled receptor kinase 2 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); delta-type opioid receptor binding (ortholog); Edg-2 lysophosphatidic acid receptor binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to catecholamine stimulus (ortholog); cellular response to chemokine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); basolateral plasma membrane (ortholog) NW_004955422 18173438 18192357 - 102025370 AGCD01022939;GBCC01034320;XM_005384356;XM_013513945;XM_013513946 XP_005384413;XP_013369399;XP_013369400 MODEL 8904568 pseudo LOC102010545 COP9 signalosome complex subunit 8-like NW_004955406 37300353 37301399 - 102010545 AGCD01006573 MODEL 39133836 misc_rna 7SK 7SK RNA 8764573 protein-coding Anp32b acidic nuclear phosphoprotein 32 family member B ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN inner ear development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell differentiation (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955419 27471539 27553078 - 102021129 AGCD01020438;AGCD01020439;AGCD01020440;AGCD01020441;GBCB01080205;XM_005382838;XM_005382839;XM_013513224 XP_005382895;XP_005382896;XP_013368678 MODEL 8730562 protein-coding Cep83 centrosomal protein 83 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); establishment of centrosome localization (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ciliopathy (ortholog); FOUND IN centriole (ortholog); ciliary transition fiber (ortholog); Golgi apparatus (ortholog) NW_004955405 31024524 31165824 - 102029472 AGCD01005280;AGCD01005281;AGCD01005282;GBBH01163359;XM_005374473;XM_005374474;XM_013518399;XM_013518406 XP_005374530;XP_005374531;XP_013373853;XP_013373860 MODEL 8735694 ncrna LOC102007156 uncharacterized LOC102007156 NW_004955440 17575869 17579753 - 102007156 AGCD01036575;GBDF01304834;XR_262035 MODEL 8796694 protein-coding LOC102009384 galectin-5-like NW_004955481 5414837 5422402 - 102009384 AGCD01056977;GBBH01036969;XM_013503347 XP_013358801 MODEL 8975253 protein-coding LOC102004655 zinc finger protein 709-like NW_004955569 1219307 1247738 - 102004655 AGCD01074645;GBDI01176345;XM_005413497 XP_005413554 MODEL 39134235 misc_rna 7SK 7SK RNA 39131371 protein-coding ACOT6 acyl-CoA thioesterase 6 8727472 protein-coding LOC102009764 keratin, type II cytoskeletal 75 NW_004955547 2773524 2784448 - 102009764 AGCD01072294;GBCB01107480;XM_005411943 XP_005412000 MODEL 8922542 protein-coding LOC102012916 tripartite motif-containing protein 60 NW_004955403 40239714 40250397 - 102012916 AGCD01002675;AGCD01002676;GBDF01161849;XM_005373589;XM_013515246;XM_013515248 XP_005373646;XP_013370700;XP_013370702 MODEL 9000805 protein-coding Cbln1 cerebellin 1 precursor ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor regulator activity (ortholog); INVOLVED IN cerebellar granule cell differentiation (ortholog); heterophilic cell-cell adhesion (ortholog); maintenance of synapse structure (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); parallel fiber to Purkinje cell synapse (ortholog) NW_004955433 7516487 7519929 - 102008449 AGCD01031571;GBDF01188759;GBDK01241650;XM_005388499 XP_005388556 MODEL 39131463 protein-coding IGHM immunoglobulin heavy constant mu 8790610 protein-coding Dlgap1 DLG associated protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN aggresome assembly (ortholog); modulation of chemical synaptic transmission (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density, intracellular component (ortholog) NW_004955402 6809126 7105356 + 102012591 AGCD01000162;AGCD01000163;AGCD01000164;AGCD01000165;GBBH01181793;XM_005372643;XM_005372644;XM_005372645;XM_005372646;XM_005372647;XM_013517746;XM_013517781;XM_013517823 XP_005372700;XP_005372701;XP_005372702;XP_005372703;XP_005372704;XP_013373200;XP_013373235;XP_013373277 MODEL 8907832 protein-coding Eif5a eukaryotic translation initiation factor 5A ENCODES a protein that exhibits RNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); cellular response to virus (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 9603800 9608490 - 102021110 AGCD01051519;GBDK01109542;XM_005399521;XM_005399522 XP_005399578;XP_005399579 MODEL 8983502 protein-coding Inhbc inhibin subunit beta C ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog) NW_004955458 5148923 5173136 + 102027615 AGCD01047461;AGCD01047462;AGCD01047463;AGCD01047464;AGCD01047465;AGCD01047466;AGCD01047467;GBDF01268750;XM_005397372 XP_005397429 MODEL 8972409 protein-coding Clasp1 cytoplasmic linker associated protein 1 ENCODES a protein that exhibits dystroglycan binding (ortholog); kinetochore binding (ortholog); microtubule binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); basement membrane organization (ortholog); cell division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); cervical cancer (ortholog); FOUND IN basal cortex (ortholog); cell cortex (ortholog); centrosomal corona (ortholog) NW_004955459 8382671 8628048 + 102013479 AGCD01048142;AGCD01048143;GBDI01181231;XM_005397639;XM_005397640;XM_005397643;XM_005397644;XM_005397645;XM_005397646;XM_013521069;XM_013521070;XM_013521071;XM_013521072;XM_013521073;XM_013521074;XM_013521075;XM_013521076 XP_005397696;XP_005397697;XP_005397700;XP_005397701;XP_005397702;XP_005397703;XP_013376523;XP_013376524;XP_013376525;XP_013376526;XP_013376527;XP_013376528;XP_013376529;XP_013376530 MODEL 8976686 protein-coding LOC102003930 BPI fold-containing family C protein-like NW_004957031 166 1202 - 102003930 AGCD01080427;XM_005415220 XP_005415277 MODEL 8918223 protein-coding Cndp1 carnosine dipeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); carboxypeptidase activity (ortholog); dipeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); regulation of protein metabolic process (ortholog); PARTICIPATES IN beta-alanine metabolic pathway; carnosinemia pathway; GABA aminotransferase deficiency pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); glomerulonephritis (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog) NW_004955402 57970205 58019980 + 102013893 AGCD01001519;AGCD01001520;AGCD01001521;GBDF01308056;XM_005373081;XM_005373083;XM_005373084 XP_005373138;XP_005373140;XP_005373141 MODEL 8842634 protein-coding Kctd12 potassium channel tetramerization domain containing 12 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic membrane (ortholog); presynaptic active zone membrane (ortholog) NW_004955404 30325019 30330953 + 102020078 AGCD01004003;GBBH01119634;GBCE01030852;XM_005374166 XP_005374223 MODEL 8740725 protein-coding Abca9 ATP binding cassette subfamily A member 9 ASSOCIATED WITH colon adenocarcinoma (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog) NW_004955478 3718494 3785147 + 102025460 AGCD01055830;AGCD01055831;GBCE01034596;XM_005402114;XM_005402115 XP_005402171;XP_005402172 MODEL 8969950 ncrna LOC102005695 uncharacterized LOC102005695 NW_004955468 5827349 5829436 + 102005695 AGCD01051978;XR_263391 MODEL 8892161 protein-coding Chic2 cysteine rich hydrophobic domain 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi-associated vesicle (ortholog); plasma membrane (ortholog) NW_004955447 16723598 16805878 + 102010211 AGCD01041101;AGCD01041102;AGCD01041103;AGCD01041104;AGCD01041105;AGCD01041106;AGCD01041107;GBDF01157265;XM_005392900 XP_005392957 MODEL 8974484 protein-coding Ambn ameloblastin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN cell adhesion (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); amblyopia (ortholog); amelogenesis imperfecta type 1F (ortholog) NW_004955447 2363240 2374827 - 102025523 AGCD01040538;XM_005392786;XM_013518494 XP_005392843;XP_013373948 MODEL 9032028 protein-coding Ggh gamma-glutamyl hydrolase ENCODES a protein that exhibits gamma-glutamyl-peptidase activity (ortholog); INVOLVED IN response to ethanol (ortholog); response to insulin (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955444 15901225 15930358 + 102025402 AGCD01039158;GBDF01126172;XM_005392173 XP_005392230 MODEL 8787737 ncrna LOC102008635 uncharacterized LOC102008635 NW_004955493 5964146 5970478 + 102008635 AGCD01061081;GBBH01168010;XR_264086 MODEL 8819723 protein-coding Fer1l5 fer-1 like family member 5 INVOLVED IN binding of sperm to zona pellucida (ortholog); membrane fusion involved in acrosome reaction (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955470 4020421 4080729 + 102019685 AGCD01052714;AGCD01052715;AGCD01052716;AGCD01052717;GBDF01161468;XM_013522710;XM_013522712 XP_013378164;XP_013378166 MODEL 8982321 ncrna LOC102008271 uncharacterized LOC102008271 NW_004955445 2704964 2707871 - 102008271 AGCD01039363;GBCE01111187;XR_262299 MODEL 8781413 protein-coding Etfb electron transfer flavoprotein subunit beta ENCODES a protein that exhibits electron transfer activity (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH cervical cancer (ortholog); chronic kidney disease (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN electron transfer flavoprotein complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955558 1032743 1046300 + 102013655 AGCD01073411;AGCD01073412;GBCQ01010793;XM_005412686 XP_005412743 MODEL 8982678 protein-coding Comtd1 catechol-O-methyltransferase domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955437 16853516 16854867 + 102023847 AGCD01034715;GBCQ01065913;GBDF01055494;XM_013516968 XP_013372422 MODEL 8907619 protein-coding Cdk4 cyclin dependent kinase 4 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to interleukin-4 (ortholog); cellular response to ionomycin (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Brain Neoplasms (ortholog); Brain Stem Neoplasms (ortholog); FOUND IN bicellular tight junction (ortholog); chromatin (ortholog); cyclin D1-CDK4 complex (ortholog) NW_004955458 5457927 5460718 - 102011281 AGCD01047493;GBCB01056209;XM_005397414 XP_005397471 MODEL 8977173 ncrna LOC102021898 uncharacterized LOC102021898 NW_004955425 24681489 24694908 + 102021898 AGCD01025892;GBDF01146962;XR_001234305;XR_261168 MODEL 8741825 protein-coding Calml4 calmodulin like 4 ENCODES a protein that exhibits myosin head/neck binding (ortholog); INVOLVED IN brush border assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN microvillus (ortholog) NW_004955450 7886565 7894143 + 102022656 AGCD01042552;GBDI01021491;XM_005393681;XM_013518901;XM_013518902;XM_013518903;XM_013518904 XP_005393738;XP_013374355;XP_013374356;XP_013374357;XP_013374358 MODEL 8911090 ncrna LOC102004289 uncharacterized LOC102004289 NW_004955492 6522268 6526985 - 102004289 AGCD01060768;GBDF01157405;XR_264058 MODEL 8699520 trna Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955518;NW_004955533;NW_004955404;NW_004955468;NW_004955467 2739880;3278389;51044487;13117506;8514521 2739951;3278460;51044558;13117577;8514592 -;+;-;+;+ 101978830 AGCD01004542;AGCD01051452;AGCD01052199;AGCD01067784;AGCD01070411 MODEL 8964676 protein-coding Adcy9 adenylate cyclase 9 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955442 13310289 13433816 + 102007474 AGCD01037770;AGCD01037771;AGCD01037772;AGCD01037773;AGCD01037774;GBCB01024399;XM_013517879;XM_013517880 XP_013373333;XP_013373334 MODEL 8964897 pseudo LOC102010546 ras-related protein Rab-5A-like NW_004955455 241706 244246 - 102010546 AGCD01045555 MODEL 9047053 protein-coding Lmbrd1 LMBR1 domain containing 1 ENCODES a protein that exhibits ABC-type vitamin B12 transporter activity (ortholog); AP-2 adaptor complex binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); gastrulation (ortholog); insulin receptor internalization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Cognitive Dysfunction (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); clathrin-coated vesicle (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955488 4774835 4879401 - 102024687 AGCD01059605;AGCD01059606;GBBH01208099;XM_005404466 XP_005404523 MODEL 8847035 protein-coding Cd36 CD36 molecule (CD36 blood group) ENCODES a protein that exhibits amyloid-beta binding (ortholog); cargo receptor activity (ortholog); high-density lipoprotein particle binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955410 5003720 5120903 - 102005118 AGCD01010674;AGCD01010675;AGCD01010676;AGCD01010677;AGCD01010678;AGCD01010679;AGCD01010680;GBBH01165788;XM_005377198;XM_005377199;XM_005377200;XM_005377201;XM_013510592 XP_005377255;XP_005377256;XP_005377257;XP_005377258;XP_013366046 MODEL 8998347 protein-coding Grk3 G protein-coupled receptor kinase 3 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); D1 dopamine receptor binding (ortholog); G protein-coupled receptor kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); inositol phosphate metabolic process (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon terminus (ortholog); dendrite terminus (ortholog); dendritic shaft (ortholog) NW_004955442 19640145 19785803 - 102026805 AGCD01038071;AGCD01038072;AGCD01038073;AGCD01038074;GBDI01324664;XM_005391839;XM_005391840;XM_013517965;XM_013517966 XP_005391896;XP_005391897;XP_013373419;XP_013373420 MODEL 8800605 protein-coding LOC102011316 olfactory receptor 2T2-like NW_004955418 30170706 30175904 - 102011316 AGCD01019506;GBBH01082943;XM_005382368 XP_005382425 MODEL 8873038 protein-coding Anp32e acidic nuclear phosphoprotein 32 family member E ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); phosphatase inhibitor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) NW_004955413 531716 550480 + 102018909 AGCD01013475;AGCD01013476;AGCD01013477;GBCB01056546;GBDF01190815;XM_013511470 XP_013366924 MODEL 9025267 protein-coding Ahcyl1 adenosylhomocysteinase like 1 ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); enzyme regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); epithelial fluid transport (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955435 13487441 13525924 + 102013206 AGCD01033203;GBDF01120093;XM_005388904;XM_013516542 XP_005388961;XP_013371996 MODEL 8761863 protein-coding Htra2 HtrA serine peptidase 2 ENCODES a protein that exhibits identical protein binding (ortholog); peptidase activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 8 (ortholog); Alzheimer's disease (ortholog); asphyxia neonatorum (ortholog); FOUND IN CD40 receptor complex (ortholog); chromatin (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955424 11255756 11259170 - 102023165 AGCD01024559;GBDI01134304;XM_005385489 XP_005385546 MODEL 8750588 protein-coding Cep85 centrosomal protein 85 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); centriole assembly (ortholog); centriole replication (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cell cortex (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955452 5649069 5682264 + 102014856 AGCD01044051;GBDF01002990;XM_005394849;XM_005394850 XP_005394906;XP_005394907 MODEL 8745048 ncrna LOC102017810 uncharacterized LOC102017810 NW_004955436 21304021 21311466 + 102017810 AGCD01034051;GBBH01051674;XR_261805 MODEL 8734909 protein-coding LOC102007157 hemoglobin subunit alpha-3-like NW_004955442 17010737 17011588 - 102007157 AGCD01037931;GBDI01342197;XM_005391673 XP_005391730 MODEL 8737893 protein-coding C1galt1c1 C1GALT1 specific chaperone 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN platelet activation (ortholog); platelet morphogenesis (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH HEMOLYTIC UREMIC SYNDROME, ATYPICAL, 8, WITH RHIZOMELIC SHORT STATURE (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955572 1254289 1258561 + 102030253 AGCD01074947;GBBH01193344;XM_005413651 XP_005413708 MODEL 9013478 protein-coding Eomes eomesodermin ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); blastocyst development (ortholog); brain development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955430 19280460 19287060 - 102018517 AGCD01029712;GBDJ01152655;XM_005387507 XP_005387564 MODEL 8713993 protein-coding LOC102009385 olfactory receptor 2T27-like NW_004955418 29991095 30001887 - 102009385 AGCD01019496;XM_005382363 XP_005382420 MODEL 8959350 protein-coding Jsrp1 junctional sarcoplasmic reticulum protein 1 INVOLVED IN protein localization to membrane (ortholog); regulation of ryanodine-sensitive calcium-release channel activity (ortholog); FOUND IN sarcoplasmic reticulum (ortholog) NW_004955495 5886008 5893227 + 102015026 AGCD01062042;AGCD01062043;GBCB01004545;XM_005405906;XM_005405907;XM_005405909;XM_005405910;XM_005405912;XM_013505250 XP_005405963;XP_005405964;XP_005405966;XP_005405967;XP_005405969;XP_013360704 MODEL 8970735 ncrna LOC102006799 uncharacterized LOC102006799 NW_004955428 1444762 1465444 - 102006799 AGCD01027611;AGCD01027612;GBDF01016339;XR_001234438;XR_001234439;XR_001234440;XR_261291 MODEL 8710064 protein-coding Arc activity regulated cytoskeleton associated protein ENCODES a protein that exhibits mRNA binding (ortholog); structural molecule activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); endoderm development (ortholog); learning (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcoholic Intoxication (ortholog); Alzheimer's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955454 1379998 1383414 - 102018684 AGCD01044968;GBDJ01389179;XM_005395731 XP_005395788 MODEL 39133966 misc_rna 7SK 7SK RNA 8701075 protein-coding Ccdc92 coiled-coil domain containing 92 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Coronary Disease (ortholog); melanoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955482 5196238 5206210 + 102011990 AGCD01057323;GBDF01006230;XM_005403014;XM_005403015;XM_005403016;XM_013503548 XP_005403071;XP_005403072;XP_005403073;XP_013359002 MODEL 8723653 protein-coding Eif5a2 eukaryotic translation initiation factor 5A2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955420 1032801 1044393 - 102022604 AGCD01020560;AGCD01020561;GBDI01317060;GBDJ01306217;XM_013513425 XP_013368879 MODEL 10143383 pseudo LOC106149971 spindle and kinetochore-associated protein 3 pseudogene NW_004955458 4249312 4249690 - 106149971 AGCD01047394 MODEL 9031269 protein-coding Abcb1 ATP binding cassette subfamily B member 1 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN adult heart development (ortholog); aldosterone secretion (ortholog); carboxylic acid transmembrane transport (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute lymphoblastic leukemia (ortholog); adrenocortical carcinoma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955432 4911774 5085349 - 102016627 AGCD01030750;AGCD01030751;AGCD01030752;AGCD01030753;AGCD01030754;AGCD01030755;AGCD01030756;AGCD01030757;GBDJ01181374;XM_005387974 XP_005388031 MODEL 155888854 protein-coding ATXN3L ataxin 3 like 8714770 protein-coding Ggn gametogenetin ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN double-strand break repair (ortholog); embryo implantation (ortholog); gamete generation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); spermatogenic failure 69 (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955468 1039531 1044513 + 102015708 AGCD01051748;AGCD01051749;GBDF01007916;XM_013522470 XP_013377924 MODEL 8857044 protein-coding Ambp alpha-1-microglobulin/bikunin precursor ENCODES a protein that exhibits antioxidant activity (ortholog); carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to reactive oxygen species (ortholog); cytochrome c metabolic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN extracellular region; cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955419 13478904 13492329 + 102017455 AGCD01020004;GBDK01342688;XM_005382656 XP_005382713 MODEL 39131903 rrna 5S_rRNA 5S ribosomal RNA 8821238 protein-coding Acot7 acyl-CoA thioesterase 7 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); fatty acid catabolic process (ortholog); long-chain fatty-acyl-CoA catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955486 6188102 6258230 + 102012542 AGCD01059113;AGCD01059114;AGCD01059115;GBDI01078626;XM_005404096;XM_005404097;XM_013504310 XP_005404153;XP_005404154;XP_013359764 MODEL 8764891 protein-coding Cbln2 cerebellin 2 precursor ENCODES a protein that exhibits signaling receptor regulator activity (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); positive regulation of synapse assembly (ortholog); spontaneous synaptic transmission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); pulmonary hypertension (ortholog); uterine carcinosarcoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955402 56052340 56062190 - 102006847 AGCD01001454;GBDJ01241531;XM_005373058;XM_005373059;XM_005373060;XM_005373061;XM_005373062;XM_013511355 XP_005373115;XP_005373116;XP_005373117;XP_005373118;XP_005373119;XP_013366809 MODEL 8939945 protein-coding Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN negative regulation of fatty acid beta-oxidation (ortholog); peptidyl-lysine trimethylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955411 35999583 36025805 + 102028280 AGCD01012462;AGCD01012463;GBBH01053291;XM_005377897;XM_005377898;XM_005377899;XM_005377900;XR_001232832 XP_005377954;XP_005377955;XP_005377956;XP_005377957 MODEL 39133838 misc_rna 7SK 7SK RNA 8836933 protein-coding Dlgap2 DLG associated protein 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955403 57965571 58493946 - 102016338 AGCD01003170;AGCD01003171;AGCD01003172;AGCD01003173;AGCD01003174;AGCD01003175;AGCD01003176;AGCD01003177;AGCD01003178;AGCD01003179;AGCD01003180;AGCD01003181;AGCD01003182;GBDK01415037;XM_005373860;XM_005373861;XM_013515038 XP_005373917;XP_005373918;XP_013370492 MODEL 8963002 protein-coding Inhbe inhibin subunit beta E ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN negative regulation of adipose tissue development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lipid storage disease (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955458 5177036 5179095 + 102027947 AGCD01047467;XM_005397373 XP_005397430 MODEL 9062166 protein-coding Edrf1 erythroid differentiation regulatory factor 1 INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog) NW_004955477 3604186 3648061 + 102008095 AGCD01055557;AGCD01055558;AGCD01055559;GBDF01187670;XM_005401992;XM_005401993;XM_005401994 XP_005402049;XP_005402050;XP_005402051 MODEL 8871504 protein-coding Clasp2 cytoplasmic linker associated protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); dystroglycan binding (ortholog); microtubule binding (ortholog); INVOLVED IN basement membrane organization (ortholog); cell migration (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axonal growth cone (ortholog); basal cortex (ortholog); cell cortex (ortholog) NW_004955421 767648 957160 - 102019605 AGCD01021578;AGCD01021579;AGCD01021580;AGCD01021581;AGCD01021582;AGCD01021583;GBCB01004782;XM_005383646;XM_005383650;XM_005383651;XM_005383653;XM_005383655;XM_013513733;XM_013513734;XM_013513736;XM_013513737;XM_013513738;XM_013513739;XM_013513740;XM_013513741;XM_013513742;XM_013513743;XM_013513744;XM_013513745;XM_013513746 XP_005383703;XP_005383707;XP_005383708;XP_005383710;XP_005383712;XP_013369187;XP_013369188;XP_013369190;XP_013369191;XP_013369192;XP_013369193;XP_013369194;XP_013369195;XP_013369196;XP_013369197;XP_013369198;XP_013369199;XP_013369200 MODEL 8783584 protein-coding Cndp2 carnosine dipeptidase 2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); dipeptidase activity (ortholog); metallodipeptidase activity (ortholog); INVOLVED IN glutathione catabolic process (ortholog); nonribosomal peptide biosynthetic process (ortholog); proteolysis (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955402 57939003 57960056 + 102013032 AGCD01001518;GBCQ01010528;XM_005373079;XM_013511436;XM_013511441 XP_005373136;XP_013366890;XP_013366895 MODEL 8842154 pseudo LOC102003933 pannexin-1 pseudogene NW_004955451 1471730 1473218 + 102003933 AGCD01042971 MODEL 8771723 protein-coding Kctd13 potassium channel tetramerization domain containing 13 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of Rho protein signal transduction (ortholog); neural precursor cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955493 7039027 7055798 + 102006471 AGCD01061154;GBDF01049205;XM_005405231 XP_005405288 MODEL 8946454 ncrna LOC102011319 uncharacterized LOC102011319 NW_004955484 8530719 8557626 + 102011319 AGCD01058391;AGCD01058392;AGCD01058393;GBDF01038957;XR_263894 MODEL 8953091 protein-coding Cep85l centrosomal protein 85L INVOLVED IN neuron migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN pericentriolar material (ortholog) NW_004955436 1352481 1482061 - 102023738 AGCD01033575;AGCD01033576;AGCD01033577;GBBH01214405;GBDF01050037;XM_013516602;XR_001234950;XR_001234951;XR_001234952;XR_001234953;XR_001234954;XR_001234955;XR_001234956 XP_013372056 MODEL 39134236 misc_rna 7SK 7SK RNA 39131766 rrna 5S_rRNA 5S ribosomal RNA 8803699 pseudo LOC102017817 ubiquitin-like protein 7 pseudogene NW_004955442 13459192 13461151 + 102017817 AGCD01037774 MODEL 8831302 pseudo LOC102008273 cytochrome c, somatic pseudogene NW_004955446 3719779 3720140 - 102008273 AGCD01040028 MODEL 8773909 protein-coding LOC102009769 olfactory receptor 7G2-like NW_004955563 256431 260592 + 102009769 AGCD01074056;AGCD01074057;XM_005413198 XP_005413255 MODEL 8922235 protein-coding LOC102012918 atherin-like NW_004955452 3351568 3354575 - 102012918 AGCD01043921;GBDF01123090;XM_005394752;XM_013519519 XP_005394809;XP_013374973 MODEL 8940048 ncrna LOC102004290 uncharacterized LOC102004290 NW_004955493 4019353 4020906 - 102004290 AGCD01061023;GBDF01277572;XR_264081 MODEL 9053426 ncrna LOC102009386 uncharacterized LOC102009386 NW_004955483 2296014 2317875 + 102009386 AGCD01057673;GBDF01118867;XR_001231019 MODEL 8752753 protein-coding Cdk5 cyclin dependent kinase 5 ENCODES a protein that exhibits acetylcholine receptor activator activity (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); associative learning (ortholog); axonogenesis (ortholog); PARTICIPATES IN dopamine signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; Reelin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN axon (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog) NW_004955491 5491744 5497280 - 102029980 AGCD01060484;GBCQ01012005;XM_005404808 XP_005404865 MODEL 8822143 ncrna LOC102021899 uncharacterized LOC102021899 NW_004955426 18018072 18050051 + 102021899 AGCD01026509;AGCD01026510;GBDF01014473;XR_261200 MODEL 8709668 protein-coding Ighmbp2 immunoglobulin mu DNA binding protein 2 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-3' RNA helicase activity (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuromuscular process (ortholog); spinal cord motor neuron differentiation (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 17017855 17047724 - 102028646 AGCD01022906;AGCD01022907;AGCD01022908;GBDF01154386;XM_005384263 XP_005384320 MODEL 8845675 protein-coding Caln1 calneuron 1 INVOLVED IN gene expression (ortholog); Golgi organization (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN postsynaptic density (ortholog); trans-Golgi network membrane (ortholog) NW_004955456 9079917 9547459 + 102010771 AGCD01046506;AGCD01046507;AGCD01046508;AGCD01046509;AGCD01046510;AGCD01046511;AGCD01046512;GBDF01134483;XM_005396727;XM_005396728;XM_005396729;XM_005396730;XM_013520647;XM_013520648;XM_013520649 XP_005396784;XP_005396785;XP_005396786;XP_005396787;XP_013376101;XP_013376102;XP_013376103 MODEL 8924826 trna Trnaf-aaa transfer RNA phenylalanine (anticodon AAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465 13258353 13258434 + 101978786 AGCD01050595 MODEL 9000066 pseudo LOC102005697 calcyclin-binding protein pseudogene NW_004955414 19427986 19428570 + 102005697 AGCD01015315 MODEL 8951396 protein-coding Lmbrd2 LMBR1 domain containing 2 INVOLVED IN adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH body dysmorphic disorder (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog) NW_004955426 20928323 20972371 - 102010820 AGCD01026576;GBDI01384158;XM_005386204;XM_005386205 XP_005386261;XP_005386262 MODEL 8946118 protein-coding Ccdc93 CCC complex scaffolding subunit CCDC93 INVOLVED IN aorta development (ortholog); artery development (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955459 11668605 11748327 + 102026609 AGCD01048234;AGCD01048235;GBDF01082760;XM_005397689;XM_005397691 XP_005397746;XP_005397748 MODEL 8996353 protein-coding Ambra1 autophagy and beclin 1 regulator 1 ENCODES a protein that exhibits GTPase binding (ortholog); protein phosphatase activator activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN inositol metabolic pathway; mitochondrial autophagy pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955422 1455392 1644368 + 102007023 AGCD01022460;AGCD01022461;AGCD01022462;AGCD01022463;AGCD01022464;AGCD01022465;AGCD01022466;AGCD01022467;GBCQ01139667;XM_005384021;XM_005384022;XM_005384023;XM_005384024;XM_005384025 XP_005384078;XP_005384079;XP_005384080;XP_005384081;XP_005384082 MODEL 8962137 protein-coding Cd37 CD37 molecule INVOLVED IN defense response to protozoan (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of myeloid dendritic cell activation (ortholog); FOUND IN immunological synapse (ortholog); plasma membrane (ortholog) NW_004955559 1465937 1471249 - 102019211 AGCD01073646;GBDF01085900;XM_013509054;XM_013509055;XM_013509056;XM_013509057;XM_013509058 XP_013364508;XP_013364509;XP_013364510;XP_013364511;XP_013364512 MODEL 9018510 protein-coding Chid1 chitinase domain containing 1 ENCODES a protein that exhibits oligosaccharide binding (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955476 11246745 11276341 + 102006452 AGCD01055445;AGCD01055446;GBCE01033146;XM_005401799;XM_013502940;XM_013502941;XM_013502942;XM_013502943;XM_013502944;XM_013502945;XM_013502947 XP_005401856;XP_013358394;XP_013358395;XP_013358396;XP_013358397;XP_013358398;XP_013358399;XP_013358401 MODEL 9046382 protein-coding Grk4 G protein-coupled receptor kinase 4 ENCODES a protein that exhibits G protein-coupled receptor kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); rhodopsin kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor internalization (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; kinin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955514 1837141 1895785 + 102029318 AGCD01067065;AGCD01067066;GBDF01005059;XM_005408752;XM_005408754;XM_005408756;XM_013506761;XR_001231762 XP_005408809;XP_005408811;XP_005408813;XP_013362215 MODEL 8907540 protein-coding LOC102004656 UDP-glucuronosyltransferase 2B14-like NW_004955447 4066107 4075826 + 102004656 AGCD01040701;AGCD01040702;GBDJ01380770;XM_005392809;XM_013518529 XP_005392866;XP_013373983 MODEL 8903392 protein-coding LOC102008637 C-type lectin domain family 2 member L NW_004955494 3562862 3573552 - 102008637 AGCD01061476;AGCD01061477;GBCE01072603;GBCQ01101254;XM_013504909 XP_013360363 MODEL 8843491 protein-coding Anpep alanyl aminopeptidase, membrane ENCODES a protein that exhibits alanyl aminopeptidase activity (ortholog); aminopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN angiotensin maturation (ortholog); metanephric proximal tubule development (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; glutathione metabolic pathway; glutathione synthase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN brush border membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); external side of plasma membrane (ortholog) NW_004955416 15415981 15442032 + 102025000 AGCD01017328;AGCD01017329;AGCD01017330;GBDJ01129227;XM_005381541;XM_005381542;XM_013512629 XP_005381598;XP_005381599;XP_013368083 MODEL 10128260 protein-coding Kctd14 potassium channel tetramerization domain containing 14 NW_004955414 13921233 13921851 + 106147990 AGCD01015130;GBDJ01197096;XM_013511712 XP_013367166 MODEL 8864402 protein-coding C1galt1c1l C1GALT1 specific chaperone 1 like NW_004955441 10846009 10847263 - 102024854 AGCD01037095;GBDI01279325;XM_005390923 XP_005390980 MODEL 8974388 protein-coding Cep89 centrosomal protein 89 INVOLVED IN cilium assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); non-motile cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955468 4980699 5047494 + 102023250 AGCD01051930;AGCD01051931;AGCD01051932;AGCD01051933;AGCD01051934;AGCD01051935;AGCD01051936;AGCD01051937;AGCD01051938;GBBH01188165;GBDF01083691;XM_013522387 XP_013377841 MODEL 8791222 protein-coding Cop1 COP1 E3 ubiquitin ligase ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of fatty acid biosynthetic process (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); Golgi membrane (ortholog) NW_004955406 15662546 15859306 - 102017093 AGCD01005981;AGCD01005982;AGCD01005983;AGCD01005984;GBCB01041975;GBCB01041978;XM_013520960;XM_013520966 XP_013376414;XP_013376420 MODEL 8943509 protein-coding Jtb jumping translocation breakpoint ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); mitotic cell cycle (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); midbody (ortholog) NW_004955545 569473 571725 - 102025944 AGCD01071800;GBCE01000109;XM_005411463 XP_005411520 MODEL 9061351 pseudo LOC102006803 aldo-keto reductase family 1 member C23-like protein NW_004955429 94455 445853 + 102006803 AGCD01028306;AGCD01028307;AGCD01028308;AGCD01028309;AGCD01028310;AGCD01028311;AGCD01028312;AGCD01028313;AGCD01028314;AGCD01028315;AGCD01028316;AGCD01028317;AGCD01028318;AGCD01028319;AGCD01028320;AGCD01028321;AGCD01028322;AGCD01028323;AGCD01028324;AGCD01028325;AGCD01028326;AGCD01028327;AGCD01028328;AGCD01028329;AGCD01028330;AGCD01028331;AGCD01028332;AGCD01028333;AGCD01028334;AGCD01028335;AGCD01028336;AGCD01028337;AGCD01028338;AGCD01028339;AGCD01028340;AGCD01028341;AGCD01028342;AGCD01028343;AGCD01028344;AGCD01028345;AGCD01028346;AGCD01028347;AGCD01028348;AGCD01028349;AGCD01028350;XM_005387227 MODEL 39133967 misc_rna 7SK 7SK RNA 8923142 protein-coding Cbln3 cerebellin 3 precursor FOUND IN extracellular region (ortholog); parallel fiber to Purkinje cell synapse (ortholog); synapse (ortholog) NW_004955409 35880337 35882485 + 102025092 AGCD01010435;GBDK01038610;XM_005376997 XP_005377054 MODEL 8754673 protein-coding Inip INTS3 and NABP interacting protein INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog) NW_004955419 14729275 14732971 + 102003023 AGCD01020042;AGCD01020043;GBCQ01099369;GBCQ01099370;XM_005382701 XP_005382758 MODEL 8768483 protein-coding Dlgap3 DLG associated protein 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); molecular adaptor activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); modulation of chemical synaptic transmission (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cholinergic synapse (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955452 12981375 13039036 - 102014526 AGCD01044376;GBDF01076075;XM_005395128 XP_005395185 MODEL 8833817 protein-coding Eif5b eukaryotic translation initiation factor 5B ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); translation initiation factor activity (ortholog); INVOLVED IN regulation of translational initiation (ortholog); ribosome assembly (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955470 5622128 5676533 + 102012631 AGCD01052756;AGCD01052757;AGCD01052758;GBDF01004389;XM_005400747 XP_005400804 MODEL 8970067 protein-coding Ahcyl2 adenosylhomocysteinase like 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuron projection (ortholog) NW_004955479 10008814 10211370 + 102008848 AGCD01056515;AGCD01056516;AGCD01056517;AGCD01056518;AGCD01056519;AGCD01056520;AGCD01056521;AGCD01056522;AGCD01056523;AGCD01056524;AGCD01056525;AGCD01056526;AGCD01056527;AGCD01056528;AGCD01056529;GBBH01214807;GBDK01084835;XM_013503272 XP_013358726 MODEL 8823934 protein-coding Htra3 HtrA serine peptidase 3 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); proteolysis (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); Mycoplasma pneumoniae pneumonia (ortholog) NW_004955514 2716448 2740590 - 102007687 AGCD01067086;AGCD01067087;GBBH01126439;GBDF01112316;XM_013506746 XP_013362200 MODEL 8758011 protein-coding Clasrp CLK4 associating serine/arginine rich protein ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955555 2086356 2109503 + 102003070 AGCD01073129;AGCD01073130;GBBH01119174;XM_005412485;XM_005412486;XM_005412488;XM_013508747 XP_005412542;XP_005412543;XP_005412545;XP_013364201 MODEL 8802824 protein-coding LOC102007158 histone-binding protein RBBP7-like NW_004955558 643112 644737 + 102007158 AGCD01073381;XM_013508855 XP_013364309 MODEL 8983616 ncrna LOC102003935 uncharacterized LOC102003935 NW_004955405 35086 71659 - 102003935 AGCD01004552;GBBH01007880;XR_259346 MODEL 8999191 protein-coding Abcb10 ATP binding cassette subfamily B member 10 ENCODES a protein that exhibits ABC-type transporter activity (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN erythrocyte development (ortholog); export from the mitochondrion (ortholog); heme biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ATP-binding cassette (ABC) transporter complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955492 8532240 8573211 + 102025917 AGCD01060817;AGCD01060818;AGCD01060819;AGCD01060820;GBBH01076456;XM_005405023 XP_005405080 MODEL 9026158 ncrna LOC102011320 uncharacterized LOC102011320 NW_004955485 7682452 7684730 - 102011320 AGCD01058670;GBCB01006341;XR_263922 MODEL 39134238 misc_rna 7SK 7SK RNA 39131767 rrna 5S_rRNA 5S ribosomal RNA 39131904 rrna 5S_rRNA 5S ribosomal RNA 9046093 protein-coding Ep300 EP300 lysine acetyltransferase ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); acetyltransferase activity (ortholog); acyltransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); B cell differentiation (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); adrenocorticotropic hormone deficiency (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955413 26647553 26727875 + 102015395 AGCD01014465;AGCD01014466;AGCD01014467;GBBH01093312;GBDF01017704;XM_005379339 XP_005379396 MODEL 8797552 protein-coding Grk5 G protein-coupled receptor kinase 5 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); fat cell differentiation (ortholog); negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog); FOUND IN nuclear membrane (ortholog); nuclear speck (ortholog); plasma membrane (ortholog) NW_004955551 43918 255118 + 102008463 AGCD01072649;AGCD01072650;AGCD01072651;GBDF01085529;XM_005412154;XM_005412155 XP_005412211;XP_005412212 MODEL 8718744 protein-coding Adcyap1 adenylate cyclase activating polypeptide 1 ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); peptide hormone receptor binding (ortholog); pituitary adenylate cyclase activating polypeptide activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); behavioral fear response (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alcohol dependence (ortholog); Brain Injuries (ortholog); FOUND IN extracellular region (ortholog); neuronal dense core vesicle lumen (ortholog); terminal bouton (ortholog) NW_004955402 9091927 9099803 - 102021292 AGCD01000205;XM_005372667;XM_005372668 XP_005372724;XP_005372725 MODEL 8880610 protein-coding LOC102010548 keratin-associated protein 20-2-like NW_004955407 30234861 30239217 - 102010548 AGCD01007628;AGCD01007629;XM_005375651;XM_013506303 XP_005375708;XP_013361757 MODEL 10327845 pseudo LOC102009773 Ig heavy chain V-III region 23-like NW_004955569 3800 4314 + 102009773 AGCD01074556 MODEL 9067547 protein-coding Antkmt adenine nucleotide translocase lysine methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine trimethylation (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955442 16482450 16484164 - 102014617 AGCD01037901;GBCB01003023;XM_013517756;XM_013517757;XM_013517758 XP_013373210;XP_013373211;XP_013373212 MODEL 8966323 protein-coding Acot8 acyl-CoA thioesterase 8 ENCODES a protein that exhibits acetoacetyl-CoA hydrolase activity (ortholog); acetyl-CoA hydrolase activity (ortholog); choloyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); dicarboxylic acid catabolic process (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955445 11434649 11454806 + 102027914 AGCD01039693;AGCD01039694;AGCD01039695;GBDF01050826;XM_005392408 XP_005392465 MODEL 8974777 protein-coding Igip IgA inducing protein NW_004955418 527380 536136 - 102013172 AGCD01018679;GBDI01291441;XM_013512930 XP_013368384 MODEL 8880004 protein-coding Calr calreticulin ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to electrical stimulus (ortholog); cellular response to lithium ion (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Burkitt lymphoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); cytolytic granule (ortholog) NW_004955415 31985147 31989372 + 102025785 AGCD01016704;GBDF01006931;XM_005381041 XP_005381098 MODEL 8922052 protein-coding Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cadherin binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); brain development (ortholog); PARTICIPATES IN Reelin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN axon (ortholog); contractile muscle fiber (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955481 7408089 7411813 + 102027525 AGCD01057064;GBBH01205369;GBDI01280279;XM_005402827 XP_005402884 MODEL 8745775 protein-coding LOC102021900 transmembrane protein 45A-like NW_004955427 2000281 2046098 + 102021900 AGCD01026887;AGCD01026888;AGCD01026889;GBCC01000449;XM_005386297 XP_005386354 MODEL 39133968 misc_rna 7SK 7SK RNA 8946286 protein-coding Fer1l6 fer-1 like family member 6 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH melanoma (ortholog); stomach cancer (ortholog); urinary bladder cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); recycling endosome (ortholog) NW_004955540 2686227 2834877 + 102006282 AGCD01071324;GBBH01143568;XM_013507931;XM_013507932;XM_013507933;XM_013507934;XM_013507935;XM_013507936 XP_013363385;XP_013363386;XP_013363387;XP_013363388;XP_013363389;XP_013363390 MODEL 8870546 protein-coding Atxn7 ataxin 7 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); negative regulation of insulin-like growth factor receptor signaling pathway (ortholog); negative regulation of microtubule depolymerization (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955517 1897050 1980428 - 102018429 AGCD01067611;GBBH01188275;GBCB01002790;XM_013506935 XP_013362389 MODEL 8949886 pseudo LOC102004657 UBX domain-containing protein 2B pseudogene NW_004955402 184252 185227 + 102004657 AGCD01000011 MODEL 8766279 pseudo LOC102008641 zinc finger protein OZF-like NW_004955425 1882091 1882998 - 102008641 AGCD01025249 MODEL 8891262 protein-coding LOC102008274 cytochrome P450 3A17-like NW_004955573 1579916 1582530 - 102008274 AGCD01075071;AGCD01075072;GBDI01160800;GBDK01284967;XM_013509483 XP_013364937 MODEL 8984553 protein-coding LOC102009387 bile acid-CoA:amino acid N-acyltransferase-like NW_004955419 24443222 24466306 + 102009387 AGCD01020347;GBDJ01035584;XM_005382801;XM_013513082 XP_005382858;XP_013368536 MODEL 8777557 pseudo LOC102006807 oligosaccharyltransferase complex subunit OSTC pseudogene NW_004955512 4327196 4330962 + 102006807 AGCD01066741 MODEL 9015824 protein-coding Etfdh electron transfer flavoprotein dehydrogenase ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); electron transfer activity (ortholog); electron-transferring-flavoprotein dehydrogenase activity (ortholog); INVOLVED IN electron transport chain (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); response to oxidative stress (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955471 12282601 12308792 + 102018591 AGCD01053282;AGCD01053283;AGCD01053284;AGCD01053285;GBBH01142163;GBDF01124988;XM_005400964 XP_005401021 MODEL 39131905 rrna 5S_rRNA 5S ribosomal RNA 10275300 ncrna LOC106149972 uncharacterized LOC106149972 NW_004955458 4265470 4266042 + 106149972 AGCD01047395;GBDF01279215;XR_001236472 MODEL 8897788 trna Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978787 AGCD01003541;AGCD01050597;AGCD01050631;AGCD01050636;AGCD01057309;AGCD01062085;AGCD01066489;AGCD01066490 MODEL 8707427 protein-coding Ep400 E1A binding protein p400 ENCODES a protein that exhibits chromatin binding (ortholog); protein antigen binding (ortholog); INVOLVED IN gene expression (ortholog); nervous system development (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955482 639316 746331 - 102022599 AGCD01057180;AGCD01057181;AGCD01057182;AGCD01057183;AGCD01057184;AGCD01057185;AGCD01057186;GBCQ01006240;XM_005402961;XM_013503598;XM_013503599;XM_013503600;XM_013503601;XM_013503602;XM_013503603;XM_013503604;XM_013503605;XM_013503606;XM_013503607;XM_013503608 XP_005403018;XP_013359052;XP_013359053;XP_013359054;XP_013359055;XP_013359056;XP_013359057;XP_013359058;XP_013359059;XP_013359060;XP_013359061;XP_013359062 MODEL 8949409 protein-coding Cnep1r1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN positive regulation of triglyceride biosynthetic process (ortholog); protein localization to nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Nem1-Spo7 phosphatase complex (ortholog) NW_004955433 8161994 8176258 + 102013748 AGCD01031582;AGCD01031583;GBDF01153895;XM_005388263;XM_013516233 XP_005388320;XP_013371687 MODEL 8730640 protein-coding LOC102005698 olfactory receptor 51I1-like NW_004955414 21369682 21370626 - 102005698 AGCD01015417;XM_005380087 XP_005380144 MODEL 9000172 protein-coding Ccdc97 coiled-coil domain containing 97 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955555 255906 269432 + 102013973 AGCD01073024;GBDJ01315732;XM_005412337;XM_013508690;XM_013508691 XP_005412394;XP_013364144;XP_013364145 MODEL 9000908 protein-coding Cbln4 cerebellin 4 precursor INVOLVED IN inhibitory synapse assembly (ortholog); protein secretion (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955445 3209006 3216679 + 102012589 AGCD01039384;XM_005392279 XP_005392336 MODEL 8737740 protein-coding Amd1 adenosylmethionine decarboxylase 1 ENCODES a protein that exhibits adenosylmethionine decarboxylase activity (ortholog); identical protein binding (ortholog); putrescine binding (ortholog); INVOLVED IN polyamine metabolic process (ortholog); S-adenosylmethionine metabolic process (ortholog); spermidine biosynthetic process (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955411 35541517 35563209 + 102025334 AGCD01012439;AGCD01012440;GBDI01060072;XM_005377893 XP_005377950 MODEL 8743062 pseudo LOC102017822 60S acidic ribosomal protein P0 pseudogene NW_004955563 1331294 1333153 - 102017822 AGCD01074141 MODEL 9042382 protein-coding Chit1 chitinase 1 ENCODES a protein that exhibits chitinase activity (ortholog); endochitinase activity (ortholog); INVOLVED IN chitin catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH allergic asthma (ortholog); allergic disease (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 39229161 39253328 - 102007296 AGCD01006623;AGCD01006624;GBBH01193383;XM_005375249;XM_013522548;XM_013522551;XM_013522552 XP_005375306;XP_013378002;XP_013378005;XP_013378006 MODEL 8895153 protein-coding Ggnbp2 gametogenetin binding protein 2 INVOLVED IN cell differentiation (ortholog); labyrinthine layer blood vessel development (ortholog); labyrinthine layer development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 1345720 1386100 - 102030588 AGCD01042967;GBBH01142717;XM_005393944;XM_005393946;XM_005393947;XM_005393949;XM_013519328;XM_013519329 XP_005394001;XP_005394003;XP_005394004;XP_005394006;XP_013374782;XP_013374783 MODEL 8828591 protein-coding Calr3 calreticulin 3 ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); familial hypertrophic cardiomyopathy (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) NW_004955524 1245607 1256528 + 102025612 AGCD01068740;GBDK01091722;XM_005409493;XM_005409495 XP_005409550;XP_005409552 MODEL 8784848 protein-coding Kctd15 potassium channel tetramerization domain containing 15 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955468 3517470 3531074 + 102029611 AGCD01051861;GBDJ01018566;GBDK01361513;XM_005399994 XP_005400051 MODEL 9019262 ncrna LOC102003942 uncharacterized LOC102003942 NW_004955406 42823741 42853661 + 102003942 AGCD01006719;GBDI01207600;XR_259536;XR_259537 MODEL 8975451 protein-coding Cep95 centrosomal protein 95 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); spindle pole (ortholog) NW_004955478 7337966 7366135 - 102013290 AGCD01055958;GBDF01048300;XM_005402163;XM_005402164;XM_005402165;XM_013503172 XP_005402220;XP_005402221;XP_005402222;XP_013358626 MODEL 39133840 misc_rna 7SK 7SK RNA 8883561 protein-coding Abcb11 ATP binding cassette subfamily B member 11 ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); bile acid transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid metabolic process (ortholog); canalicular bile acid transport (ortholog); PARTICIPATES IN statin pharmacokinetics pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); benign recurrent intrahepatic cholestasis 2 (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955449 5412958 5511629 + 102003503 AGCD01041932;AGCD01041933;AGCD01041934;AGCD01041935;AGCD01041936;AGCD01041937;AGCD01041938;AGCD01041939;GBBH01010252;XM_005393267;XM_005393268;XM_013518807;XM_013518809 XP_005393324;XP_005393325;XP_013374261;XP_013374263 MODEL 9023550 ncrna LOC102011323 uncharacterized LOC102011323 NW_004955422 1718157 1721300 + 102011323 AGCD01022470;GBDF01161787;XR_260843 MODEL 9000038 protein-coding LOC102004660 spermatogenesis-associated protein 31E1-like NW_004955637 27177 28652 - 102004660 AGCD01077641;GBDF01002545;GBDF01006017;XM_013510170 XP_013365624 MODEL 8813485 ncrna LOC102011766 uncharacterized LOC102011766 NW_004955480 7767280 7832733 - 102011766 AGCD01056709;GBDI01142229;XR_001230909;XR_263746 MODEL 8829406 protein-coding Grk6 G protein-coupled receptor kinase 6 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); G protein-coupled receptor kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); desensitization of G protein-coupled receptor signaling pathway (ortholog); negative regulation of anion channel activity (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; corticotropin-releasing hormone signaling pathway; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955408 29665534 29684225 + 102026506 AGCD01008766;GBCQ01032375;GBDI01171906;XM_013509839 XP_013365293 MODEL 8718814 protein-coding Eea1 early endosome antigen 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); GTP-dependent protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); endocytosis (ortholog); vesicle fusion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axonal spine (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955405 29760332 29959553 - 102022251 AGCD01005256;AGCD01005257;AGCD01005258;AGCD01005259;AGCD01005260;AGCD01005261;AGCD01005262;AGCD01005263;GBDJ01165087;XM_013518252 XP_013373706 MODEL 8918412 protein-coding Cd38 CD38 molecule ENCODES a protein that exhibits hydrolase activity, acting on glycosyl bonds (ortholog); identical protein binding (ortholog); NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); B cell receptor signaling pathway (ortholog); female pregnancy (ortholog); PARTICIPATES IN ADP-ribosylation pathway, cyclic ribosylation; ASSOCIATED WITH acute myeloid leukemia (ortholog); Albuminuria (ortholog); Cardiomegaly (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955480 8177178 8218483 - 102015316 AGCD01056716;GBBH01103671;XM_005402521 XP_005402578 MODEL 8785353 protein-coding Acot9 acyl-CoA thioesterase 9 ENCODES a protein that exhibits acetyl-CoA hydrolase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); long-chain fatty acid metabolic process (ortholog); short-chain fatty acid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955509 4143246 4167129 - 102023177 AGCD01066054;GBDJ01352477;XM_013506293 XP_013361747 MODEL 8875344 protein-coding LOC102004294 cytochrome P450 4F22 ENCODES a protein that exhibits monooxygenase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); atopic dermatitis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955495 7730881 7763684 - 102004294 AGCD01062162;AGCD01062163;GBDF01280840;XM_005406064;XM_013505318 XP_005406121;XP_013360772 MODEL 8788066 protein-coding Dlgap4 DLG associated protein 4 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cholinergic synapse (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955422 25098914 25221238 - 102023161 AGCD01023245;AGCD01023246;AGCD01023247;GBDF01221819;XM_005384740;XM_005384741;XM_005384742;XM_005384743 XP_005384797;XP_005384798;XP_005384799;XP_005384800 MODEL 8777430 protein-coding Ahdc1 AT-hook DNA binding motif containing 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); promoter-enhancer loop anchoring activity (ortholog); INVOLVED IN adipose tissue development (ortholog); aerobic respiration (ortholog); energy reserve metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autism spectrum disorder (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 6767250 6832989 - 102005102 AGCD01044125;AGCD01044126;AGCD01044127;GBDK01394363;XM_005394910;XM_005394912;XM_005394914;XM_005394915;XM_005394916;XM_005394917;XM_013519581 XP_005394967;XP_005394969;XP_005394971;XP_005394972;XP_005394973;XP_005394974;XP_013375035 MODEL 8976129 protein-coding LOC102012925 myotubularin-related protein 3 NW_004955455 4120714 4264635 + 102012925 AGCD01045667;AGCD01045668;AGCD01045669;AGCD01045670;AGCD01045671;AGCD01045672;AGCD01045673;GBDF01118467;XM_005396228;XM_005396229;XM_005396230;XM_005396231;XM_005396232;XM_005396233;XM_005396234;XM_005396235;XM_005396237;XM_005396238;XM_005396239 XP_005396285;XP_005396286;XP_005396287;XP_005396288;XP_005396289;XP_005396290;XP_005396291;XP_005396292;XP_005396294;XP_005396295;XP_005396296 MODEL 9056069 protein-coding Clba1 clathrin binding box of aftiphilin containing 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955538 3325052 3340534 + 102030237 AGCD01071159;AGCD01071160;GBCE01153411;XM_005410851;XM_005410852;XM_013507884;XM_013507885;XM_013507887 XP_005410908;XP_005410909;XP_013363338;XP_013363339;XP_013363341 MODEL 39131303 protein-coding C1orf56 chromosome 1 open reading frame 56 8751086 protein-coding Eif6 eukaryotic translation initiation factor 6 ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog); lamin filament (ortholog) NW_004956210 226 6819 + 102011720 AGCD01079244;GBBH01031356;XM_005415177 XP_005415234 MODEL 8799794 ncrna LOC102007160 uncharacterized LOC102007160 NW_004955443 4405793 4414236 + 102007160 AGCD01038213;GBDF01080321;XR_262175 MODEL 39131768 rrna 5S_rRNA 5S ribosomal RNA 8979850 protein-coding Arcn1 archain 1 coat protein complex I subunit delta INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer maturation (ortholog); Golgi vesicle transport (ortholog); ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955412 19718534 19750340 + 102012840 AGCD01012972;AGCD01012973;AGCD01012974;AGCD01012975;AGCD01012976;AGCD01012977;GBDF01049215;XM_005378251 XP_005378308 MODEL 8848632 protein-coding Lmcd1 LIM and cysteine rich domains 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); coronary stenosis (ortholog); FOUND IN nucleus (ortholog) NW_004955561 151315 213904 + 102025852 AGCD01073819;GBCE01030182;XM_005412996;XM_013509111 XP_005413053;XP_013364565 MODEL 9040653 protein-coding Adcyap1r1 ADCYAP receptor type I ENCODES a protein that exhibits adenylate cyclase binding (ortholog); pituitary adenylate cyclase-activating polypeptide receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cAMP metabolic process (ortholog); ASSOCIATED WITH asthma (ortholog); cystitis (ortholog); ovarian cancer (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell surface (ortholog) NW_004955410 32176683 32229187 + 102024318 AGCD01011335;AGCD01011336;GBBH01079724;GBCE01117049;XM_013510664;XM_013510665 XP_013366118;XP_013366119 MODEL 39131906 rrna 5S_rRNA 5S ribosomal RNA 9022818 ncrna LOC102011333 uncharacterized LOC102011333 NW_004955424 5069373 5154243 + 102011333 AGCD01024384;GBDF01080540;XR_001234147;XR_261043 MODEL 9020774 protein-coding Iglon5 IgLON family member 5 INVOLVED IN motor behavior (ortholog); neuromuscular process controlling balance (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955558 1059263 1066616 - 102013976 AGCD01073413;GBCE01131499;GBDK01125776;XM_013508838 XP_013364292 MODEL 8962839 protein-coding Inka1 inka box actin regulator 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN neural tube development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955532 1695956 1697521 + 102019430 AGCD01070198;GBCE01188453;GBCQ01178275;XM_005410222 XP_005410279 MODEL 8863471 protein-coding LOC102021901 thioredoxin domain-containing protein 2-like NW_004955504 1761700 1768176 - 102021901 AGCD01064847;XM_005407083 XP_005407140 MODEL 8967431 protein-coding Epas1 endothelial PAS domain protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); cobalt ion binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); cell differentiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); azoospermia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955441 13244626 13328220 + 102011250 AGCD01037146;AGCD01037147;AGCD01037148;GBBH01002906;XM_005390973 XP_005391030 MODEL 8861530 protein-coding Htra4 HtrA serine peptidase 4 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955463 14525798 14536948 + 102012072 AGCD01049912;GBCE01122540;GBDK01169288;XM_013521536 XP_013376990 MODEL 8814870 protein-coding LOC102005700 uncharacterized LOC102005700 NW_004955470 11975332 11978904 - 102005700 AGCD01052916;GBCQ01088386;XM_013522705 XP_013378159 MODEL 39134239 misc_rna 7SK 7SK RNA 8791731 protein-coding Cbr1 carbonyl reductase 1 ENCODES a protein that exhibits 15-hydroxyprostaglandin dehydrogenase (NADP+) activity (ortholog); alcohol dehydrogenase (NADP+) activity (ortholog); carbonyl reductase (NADPH) activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); glucocorticoid metabolic process (ortholog); positive regulation of reactive oxygen species metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cardiomyopathy (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955407 35351601 35354510 - 102008183 AGCD01007739;GBCB01024477;XM_005375726 XP_005375783 MODEL 8993438 pseudo LOC102008645 glycolipid transfer protein pseudogene NW_004955501 6968136 6973149 + 102008645 AGCD01064202;XM_005406840 MODEL 8705713 protein-coding Chka choline kinase alpha ENCODES a protein that exhibits ATP binding (ortholog); choline binding (ortholog); choline kinase activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); choline metabolic process (ortholog); ethanolamine metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colon adenoma (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog) NW_004955422 17710981 17766256 + 102006673 AGCD01022932;GBDF01051159;XM_005384285;XM_005384286 XP_005384342;XP_005384343 MODEL 9037186 protein-coding Atxn7l1 ataxin 7 like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955410 10167196 10391362 - 102023446 AGCD01010793;AGCD01010794;GBDK01168953;XM_005377250;XM_005377251;XM_005377252;XM_005377253;XM_005377254;XM_005377255;XM_005377256;XM_005377257;XM_005377258;XM_005377259;XM_005377260;XM_005377261;XM_005377262;XM_013510529;XM_013510530;XM_013510531;XM_013510532;XM_013510533;XR_001232727 XP_005377307;XP_005377308;XP_005377309;XP_005377310;XP_005377311;XP_005377312;XP_005377313;XP_005377314;XP_005377315;XP_005377316;XP_005377317;XP_005377318;XP_005377319;XP_013365983;XP_013365984;XP_013365985;XP_013365986;XP_013365987 MODEL 8866156 protein-coding Cep97 centrosomal protein 97 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) NW_004955427 3227130 3247062 + 102029880 AGCD01026929;AGCD01026930;GBBH01127224;XM_005386326;XM_005386327;XM_005386328;XM_005386329;XM_005386331;XM_013515080;XR_261225 XP_005386383;XP_005386384;XP_005386385;XP_005386386;XP_005386388;XP_013370534 MODEL 8931695 protein-coding Kctd16 potassium channel tetramerization domain containing 16 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); INVOLVED IN behavioral fear response (ortholog); memory (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); stomach cancer (ortholog); FOUND IN postsynaptic membrane (ortholog); presynaptic membrane (ortholog); signaling receptor complex (ortholog) NW_004955415 9511749 9795134 - 102021004 AGCD01016106;AGCD01016107;AGCD01016108;AGCD01016109;AGCD01016110;GBDF01016348;XM_013512333;XM_013512334;XM_013512335 XP_013367787;XP_013367788;XP_013367789 MODEL 8716687 protein-coding LOC102010566 olfactory receptor 151-like NW_004955412 25630768 25631700 + 102010566 AGCD01013166;XM_005378428 XP_005378485 MODEL 8846396 pseudo LOC102009388 liver carboxylesterase 2-like NW_004955484 9699400 9714908 - 102009388 AGCD01058425 MODEL 39133969 misc_rna 7SK 7SK RNA 8858683 protein-coding Cdk5r2 cyclin dependent kinase 5 regulatory subunit 2 ENCODES a protein that exhibits actin binding (ortholog); cyclin-dependent protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cerebellum development (ortholog); hippocampus development (ortholog); layer formation in cerebral cortex (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); membrane (ortholog) NW_004955453 14471625 14474082 - 102013903 AGCD01044865;AGCD01044866;GBBH01132441;XM_013519766 XP_013375220 MODEL 10124296 ncrna LOC106149973 uncharacterized LOC106149973 NW_004955458 10983507 10997983 - 106149973 AGCD01047711;XR_001236473 MODEL 8784783 protein-coding Grk7 G protein-coupled receptor kinase 7 ENCODES a protein that exhibits rhodopsin kinase activity (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH sarcoma (ortholog) NW_004955508 3937132 3982216 - 102029097 AGCD01065850;AGCD01065851;AGCD01065852;AGCD01065853;GBDF01224465;GBDF01224467;XM_013506246 XP_013361700 MODEL 8918609 protein-coding Cnfn cornifelin ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cornified envelope (ortholog) NW_004955555 541648 543878 + 102022234 AGCD01073036;GBDI01006348;XM_005412361;XM_013508681;XM_013508682 XP_005412418;XP_013364135;XP_013364136 MODEL 8993560 protein-coding Jun Jun proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon regeneration (ortholog); cellular response to anisomycin (ortholog); PARTICIPATES IN adenosine signaling pathway; endothelin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH Alcohol-Related Disorders (ortholog); angiosarcoma (ortholog); Asphyxia (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) NW_004955464 1107598 1110326 + 102016032 AGCD01049944;AGCD01049945;GBCB01000077;GBDI01073972;XM_005398485 XP_005398542 MODEL 9051685 protein-coding Ferd3l Fer3 like bHLH transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); floor plate development (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) NW_004955410 22034413 22034978 - 102028167 AGCD01011068;XM_005377355 XP_005377412 MODEL 8933062 pseudo LOC102004295 coiled-coil domain-containing protein 94 pseudogene NW_004955423 23602366 23603386 + 102004295 AGCD01024009 MODEL 8793820 protein-coding Acox1 acyl-CoA oxidase 1 ENCODES a protein that exhibits acyl-CoA oxidase activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Charcot-Marie-Tooth disease axonal type 2K (ortholog); FOUND IN cytoplasm (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) NW_004955506 6286824 6309764 + 102007679 AGCD01065411;GBCB01041555;GBDF01163252;XM_005407465 XP_005407522 MODEL 8743063 protein-coding LOC102017825 vomeronasal type-1 receptor 3-like NW_004955569 1124261 1125758 - 102017825 AGCD01074639;XM_005413519 XP_005413576 MODEL 8737535 pseudo LOC102009774 calmodulin-A pseudogene NW_004955573 459943 467278 + 102009774 AGCD01074980 MODEL 8785651 protein-coding LOC102008275 olfactory receptor 2B6-like NW_004955576 1201716 1202654 - 102008275 AGCD01075364;XM_005413943 XP_005414000 MODEL 9017677 protein-coding C1qa complement C1q A chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN astrocyte activation (ortholog); complement activation, classical pathway (ortholog); complement-mediated synapse pruning (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Brain Injuries (ortholog); C1q Deficiency (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); complement component C1q complex (ortholog) NW_004955452 2753362 2756220 + 102012920 AGCD01043903;GBDK01006456;XM_013519754 XP_013375208 MODEL 8823216 pseudo LOC102007161 zinc finger protein 451 pseudogene NW_004955444 72378 78511 + 102007161 AGCD01038648;AGCD01038649 MODEL 8896831 protein-coding Ahi1 Abelson helper integration site 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell junction assembly (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); centriole (ortholog) NW_004955439 1277185 1460296 + 102027679 AGCD01035610;AGCD01035611;AGCD01035612;AGCD01035613;AGCD01035614;GBDF01123056;XM_005390486;XM_013517380 XP_005390543;XP_013372834 MODEL 39131769 rrna 5S_rRNA 5S ribosomal RNA 39133842 misc_rna 7SK 7SK RNA 8796021 protein-coding LOC102004662 interleukin-3 receptor subunit alpha-like NW_004956002 9149 9686 - 102004662 AGCD01078846;GBCE01069509;GBDK01099765;XM_005415160 XP_005415217 MODEL 8863341 protein-coding Antxr1 ANTXR cell adhesion molecule 1 ENCODES a protein that exhibits actin filament binding (ortholog); collagen binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel development (ortholog); negative regulation of extracellular matrix assembly (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); filopodium membrane (ortholog) NW_004955424 15820734 16034278 - 102017139 AGCD01024730;AGCD01024731;AGCD01024732;AGCD01024733;AGCD01024734;AGCD01024735;AGCD01024736;GBBH01227748;GBCE01074216;XM_013514693 XP_013370147 MODEL 15036848 trna Trnag-acc transfer RNA glycine (anticodon ACC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978843 8860760 protein-coding LOC102011767 galectin-5-like NW_004955481 5476020 5485385 + 102011767 AGCD01056980;AGCD01056981;GBDF01261565;XM_005402778;XM_005402779 XP_005402835;XP_005402836 MODEL 8832960 protein-coding Eed embryonic ectoderm development ENCODES a protein that exhibits chromatin binding (ortholog); enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); facultative heterochromatin formation (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN chromatin silencing complex (ortholog); ESC/E(Z) complex (ortholog); nucleoplasm (ortholog) NW_004955414 6659144 6685530 - 102011107 AGCD01014926;GBBH01214076;XM_005379744;XM_013511798 XP_005379801;XP_013367252 MODEL 8955933 protein-coding Ccdc9b coiled-coil domain containing 9B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955416 7258446 7268342 - 102018827 AGCD01016971;GBDK01127159;XM_013512619 XP_013368073 MODEL 39131432 protein-coding IGLV2-33 immunoglobulin lambda variable 2-33 (non-functional) 8789554 protein-coding Amdhd1 amidohydrolase domain containing 1 PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955405 32281726 32308230 + 102028714 AGCD01005331;AGCD01005332;AGCD01005333;GBDF01200165;XM_005374693 XP_005374750 MODEL 8735155 protein-coding Copa coat protein complex I subunit alpha ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN pancreatic juice secretion (ortholog); protein localization to axon (ortholog); protein localization to cell leading edge (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arthritis (ortholog); autoimmune disease (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955468 12062942 12111048 - 102017651 AGCD01052140;AGCD01052141;AGCD01052142;AGCD01052143;GBDK01074088;XM_005400206;XM_005400207 XP_005400263;XP_005400264 MODEL 8816960 protein-coding Ggps1 geranylgeranyl diphosphate synthase 1 ENCODES a protein that exhibits (2E,6E)-farnesyl diphosphate synthase activity (ortholog); geranylgeranyl diphosphate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN geranylgeranyl diphosphate biosynthetic process (ortholog); isoprenoid metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); MUSCULAR DYSTROPHY, CONGENITAL HEARING LOSS, AND OVARIAN INSUFFICIENCY SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955492 4582998 4593194 - 102025018 AGCD01060726;GBDI01135083;XM_005404953;XM_013504680;XM_013504682 XP_005405010;XP_013360134;XP_013360136 MODEL 8878375 protein-coding Dlgap5 DLG associated protein 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955409 8408040 8445587 + 102025879 AGCD01009407;AGCD01009408;AGCD01009409;AGCD01009410;AGCD01009411;GBDF01087616;XM_005376750;XM_013510318;XM_013510319 XP_005376807;XP_013365772;XP_013365773 MODEL 8713732 protein-coding Calu calumenin ENCODES a protein that exhibits calcium ion binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN peripheral nervous system axon regeneration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955479 9541574 9572189 + 102028748 AGCD01056480;AGCD01056481;AGCD01056482;GBCE01001921;XM_005402382;XM_013503287 XP_005402439;XP_013358741 MODEL 8744051 pseudo LOC102006809 40S ribosomal protein SA pseudogene NW_004955431 11112412 11113388 - 102006809 AGCD01030224 MODEL 8896221 protein-coding Abcb5 ATP binding cassette subfamily B member 5 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); efflux transmembrane transporter activity (ortholog); INVOLVED IN eye development (ortholog); regulation of membrane potential (ortholog); transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 23283263 23379000 + 102003951 AGCD01011097;AGCD01011098;AGCD01011099;GBDJ01161751;XM_005377366 XP_005377423 MODEL 8728223 protein-coding LOC102008649 olfactory receptor 5M11-like NW_004955511 1679591 1680559 - 102008649 AGCD01066377;XM_005407971 XP_005408028 MODEL 8720362 protein-coding Etfrf1 electron transfer flavoprotein regulatory factor 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN negative regulation of oxidative phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 20287287 20294430 + 102029279 AGCD01014212;GBDF01080150;XM_005379098;XM_013511449 XP_005379155;XP_013366903 MODEL 8746835 pseudo LOC102007162 protein Red-like NW_004955565 2044877 2054593 - 102007162 AGCD01074340 MODEL 9002953 protein-coding Chkb choline kinase beta ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); megaconial type congenital muscular dystrophy (ortholog); muscular dystrophy (ortholog) NW_004955413 33588375 33592054 - 102007984 AGCD01014681;GBCE01056009;XM_005379593;XM_005379594 XP_005379650;XP_005379651 MODEL 9002739 protein-coding Atxn7l2 ataxin 7 like 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955435 12904829 12913351 + 102029551 AGCD01033174;GBBH01066741;GBDF01254358;XM_005388863;XM_013516428;XM_013516430;XM_013516431 XP_005388920;XP_013371882;XP_013371884;XP_013371885 MODEL 8970757 protein-coding Cd3d CD3d molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); INVOLVED IN positive thymic T cell selection (ortholog); T cell receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); colon adenocarcinoma (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) NW_004955412 19481059 19484890 - 102008391 AGCD01012954;GBBH01091026;XM_005378237 XP_005378294 MODEL 8861391 protein-coding Areg amphiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); epithelial cell proliferation involved in mammary gland duct elongation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955474 680212 689021 + 102006903 AGCD01054227;GBDK01177128;XM_005401313 XP_005401370 MODEL 8845347 protein-coding Add1 adducin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal adaptor activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955514 1784302 1812845 + 102027219 AGCD01067064;GBDI01001021;XM_005408743;XM_005408744;XM_005408745;XM_005408746;XM_005408749 XP_005408800;XP_005408801;XP_005408802;XP_005408803;XP_005408806 MODEL 8828038 protein-coding LOC102009392 60S ribosomal protein L10-like NW_004955491 5944474 5944994 - 102009392 AGCD01060510;XM_005404834 XP_005404891 MODEL 8765011 pseudo LOC102011771 glucose-induced degradation protein 8 homolog pseudogene NW_004955419 29922246 29923728 - 102011771 AGCD01020515 MODEL 8956572 ncrna LOC102011336 uncharacterized LOC102011336 NW_004955500 5251418 5257274 + 102011336 AGCD01063826;GBDJ01403986;XR_001231513;XR_264228 MODEL 8767706 ncrna LOC102012930 uncharacterized LOC102012930 NW_004955408 11342486 11344637 + 102012930 AGCD01008307;GBDF01286807;XR_259678 MODEL 8817470 protein-coding Clca1 chloride channel accessory 1 INVOLVED IN cellular response to hypoxia (ortholog); ASSOCIATED WITH asbestosis (ortholog); asthma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN membrane (ortholog); microvillus (ortholog); secretory granule (ortholog) NW_004955423 7684741 7714438 - 102021459 AGCD01023610;GBDI01162443;XM_005385128 XP_005385185 MODEL 10214263 ncrna LOC106149974 uncharacterized LOC106149974 NW_004955458 1828045 1847679 + 106149974 AGCD01047206;GBCQ01121701;XR_001236474 MODEL 8752232 ncrna LOC102005701 uncharacterized LOC102005701 NW_004955471 8033027 8043382 + 102005701 AGCD01053175;GBDF01122898;XR_263529 MODEL 9068289 protein-coding Grm1 glutamate metabotropic receptor 1 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential (ortholog); glutamate receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to electrical stimulus (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive spinocerebellar ataxia 13 (ortholog); Bone Tissue Neoplasms (ortholog); FOUND IN axon (ortholog); dendriole (ortholog); dendrite (ortholog) NW_004955436 14264470 14377581 - 102027453 AGCD01033871;XM_013516588 XP_013372042 MODEL 8800238 pseudo LOC102003943 forkhead box protein M1 pseudogene NW_004955406 36927530 36938489 + 102003943 AGCD01006570 MODEL 39134240 misc_rna 7SK 7SK RNA 8947774 protein-coding Junb JunB proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to hormone stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH anaplastic large cell lymphoma (ortholog); colon cancer (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955415 31876508 31878289 + 102021965 AGCD01016700;GBBH01061809;XM_005381028 XP_005381085 MODEL 8710020 ncrna LOC102017826 uncharacterized LOC102017826 NW_004955447 224885 228738 - 102017826 AGCD01040449;GBDI01039983;XR_262402 MODEL 8788361 protein-coding Cbr3 carbonyl reductase 3 ENCODES a protein that exhibits 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); carbonyl reductase (NADPH) activity (ortholog); NADPH binding (ortholog); INVOLVED IN cognition (ortholog); phylloquinone catabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Familial Platelet Disorder with Associated Myeloid Malignancy (ortholog); Mouth Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955407 35419674 35428270 + 102007301 AGCD01007742;GBDI01006352;XM_005375724;XM_013504553 XP_005375781;XP_013360007 MODEL 8736415 protein-coding LOC102008276 olfactory receptor 2H1 NW_004955583 74419 75726 + 102008276 AGCD01075793;GBDI01145055;XM_005414287 XP_005414344 MODEL 8845212 protein-coding Amdhd2 amidohydrolase domain containing 2 ENCODES a protein that exhibits N-acetylgalactosamine-6-phosphate deacetylase activity (ortholog); N-acetylglucosamine-6-phosphate deacetylase activity (ortholog); INVOLVED IN negative regulation of UDP-N-acetylglucosamine biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 14775528 14791650 - 102021805 AGCD01037839;GBDK01061652;XM_013517941;XM_013517942;XM_013517943;XM_013517944 XP_013373395;XP_013373396;XP_013373397;XP_013373398 MODEL 8864949 protein-coding Lmf1 lipase maturation factor 1 INVOLVED IN chylomicron remnant clearance (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955442 16250131 16360907 + 102013881 AGCD01037893;AGCD01037894;AGCD01037895;AGCD01037896;AGCD01037897;AGCD01037898;GBDJ01272886;XM_005391597 XP_005391654 MODEL 39133844 misc_rna 7SK 7SK RNA 8815895 protein-coding Ahnak AHNAK nucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); S100 protein binding (ortholog); structural molecule activity conferring elasticity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); Chloracne (ortholog); colorectal cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell contact zone (ortholog); costamere (ortholog) NW_004955599 629271 656564 + 102017409 AGCD01076663;AGCD01076664;AGCD01076665;GBBH01025974;XM_013510061 XP_013365515 MODEL 8910633 protein-coding Eipr1 EARP complex and GARP complex interacting protein 1 INVOLVED IN endocytic recycling (ortholog); positive regulation of endocytic recycling (ortholog); positive regulation of retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN EARP complex (ortholog); GARP complex (ortholog); nucleolus (ortholog) NW_004955487 3865469 3959750 + 102018608 AGCD01059295;AGCD01059296;AGCD01059297;GBDF01086957;XM_005404376 XP_005404433 MODEL 39133970 misc_rna 7SK 7SK RNA 39131907 rrna 5S_rRNA 5S ribosomal RNA 9050766 protein-coding Cdk5rap1 CDK5RAP1 mitochondrial tRNA methylthiotransferase ENCODES a protein that exhibits protein-containing complex binding (ortholog); tRNA-2-methylthio-N(6)-dimethylallyladenosine(37) synthase activity (ortholog); INVOLVED IN mitochondrial tRNA modification (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); positive regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955422 27878048 27907157 + 102028432 AGCD01023339;AGCD01023340;GBDJ01424325;XM_013514321 XP_013369775 MODEL 8866129 protein-coding Inka2 inka box actin regulator 2 ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955435 15179883 15195457 - 102028459 AGCD01033263;GBDF01056552;XM_005388952 XP_005389009 MODEL 8800511 protein-coding Atxn7l3 ataxin 7 like 3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN DUBm complex (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955451 17280659 17286140 - 102010659 AGCD01043735;GBDJ01004931;GBDK01417543;XM_005394524;XM_013519365;XM_013519366;XM_013519367;XM_013519368 XP_005394581;XP_013374819;XP_013374820;XP_013374821;XP_013374822 MODEL 8952266 protein-coding Ccer1 coiled-coil glutamate rich protein 1 INVOLVED IN sperm DNA condensation (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) NW_004955405 28171582 28173380 - 102018055 AGCD01005232;GBDF01007441;XM_005374445 XP_005374502 MODEL 9003821 protein-coding Eef1a1 eukaryotic translation elongation factor 1 alpha 1 ENCODES a protein that exhibits calmodulin binding (ortholog); GTPase activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; translation elongation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Burns (ortholog); carcinoma (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955493 8661317 8663190 - 102009516 AGCD01061325;GBBH01000801;GBCE01002384;XM_005405329 XP_005405386 MODEL 8806398 protein-coding Acox2 acyl-CoA oxidase 2 ENCODES a protein that exhibits 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity (ortholog); fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN peroxisome (ortholog) NW_004955430 1638931 1665308 + 102006263 AGCD01029130;GBDJ01052486;XM_005387286 XP_005387343 MODEL 39131770 rrna 5S_rRNA 5S ribosomal RNA 9058595 protein-coding C1qb complement C1q B chain ENCODES a protein that exhibits identical protein binding (ortholog); IgG binding (ortholog); IgM binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); inner ear development (ortholog); response to glucocorticoid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); C1q Deficiency (ortholog); C1q Deficiency 1 (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); complement component C1q complex (ortholog) NW_004955452 2765844 2771695 + 102010120 AGCD01043903;GBCE01000145;XM_005394745;XM_013519694 XP_005394802;XP_013375148 MODEL 9018507 protein-coding LOC102003944 keratin-associated protein 15-1-like NW_004955407 29796762 29797163 + 102003944 AGCD01007615;XM_005375632 XP_005375689 MODEL 8835773 protein-coding Cept1 choline/ethanolamine phosphotransferase 1 ENCODES a protein that exhibits 1-alkenyl-2-acylglycerol choline phosphotransferase activity (ortholog); diacylglycerol cholinephosphotransferase activity (ortholog); ethanolaminephosphotransferase activity (ortholog); INVOLVED IN phosphatidylcholine biosynthetic process (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955435 14704269 14743765 + 102022221 AGCD01033249;GBCQ01062983;XM_005388936;XM_005388937 XP_005388993;XP_005388994 MODEL 8762066 pseudo LOC102008651 olfactory receptor 5W2-like NW_004955511 816950 817885 + 102008651 AGCD01066344 MODEL 8797129 pseudo LOC102021902 dnaJ homolog subfamily C member 21 pseudogene NW_004955509 2211423 2213015 - 102021902 AGCD01065993 MODEL 9063625 protein-coding LOC102007164 zinc finger protein 709-like NW_004955569 1445074 1480352 + 102007164 AGCD01074655;AGCD01074656;GBDF01080557;XM_013509372;XM_013509373 XP_013364826;XP_013364827 MODEL 9032890 protein-coding Htt huntingtin ENCODES a protein that exhibits beta-tubulin binding (ortholog); diazepam binding (ortholog); dynactin binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); associative learning (ortholog); PARTICIPATES IN Huntington's disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cadmium Poisoning (ortholog); FOUND IN autophagosome (ortholog); axon (ortholog); centriole (ortholog) NW_004955514 1906189 2042357 + 102006381 AGCD01067067;AGCD01067068;AGCD01067069;AGCD01067070;AGCD01067071;GBBH01187582;GBCE01064737;XM_013506814;XM_013506815 XP_013362268;XP_013362269 MODEL 9050556 protein-coding Ethe1 ETHE1 persulfide dioxygenase ENCODES a protein that exhibits identical protein binding (ortholog); iron ion binding (ortholog); sulfur dioxygenase activity (ortholog); INVOLVED IN glutathione metabolic process (ortholog); sulfide oxidation (ortholog); ASSOCIATED WITH ethylmalonic encephalopathy (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955555 1262860 1279714 - 102016105 AGCD01073068;AGCD01073069;GBDJ01127270;XM_005412440 XP_005412497 MODEL 8816883 protein-coding Epb41 erythrocyte membrane protein band 4.1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); actin binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); protein-containing complex assembly (ortholog); regulation of calcium ion transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Elliptocytosis 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell cortex (ortholog); cortical cytoskeleton (ortholog) NW_004955452 7930095 8123165 + 102021512 AGCD01044202;AGCD01044203;AGCD01044204;AGCD01044205;AGCD01044206;AGCD01044207;AGCD01044208;AGCD01044209;GBBH01033044;XM_005394970;XM_013519473;XM_013519474;XM_013519475;XM_013519476;XM_013519477;XM_013519478 XP_005395027;XP_013374927;XP_013374928;XP_013374929;XP_013374930;XP_013374931;XP_013374932 MODEL 8782097 ncrna LOC102011776 uncharacterized LOC102011776 NW_004955421 24690889 24718021 + 102011776 AGCD01022221;GBDF01281561;XR_260824 MODEL 9042426 ncrna LOC102009778 uncharacterized LOC102009778 NW_004955402 5585104 5592598 - 102009778 AGCD01000137;GBDF01225737;XR_259030 MODEL 8876176 protein-coding Ggt1 gamma-glutamyltransferase 1 ENCODES a protein that exhibits aminoacyltransferase activity (ortholog); glutathione gamma-glutamate hydrolase (ortholog); leukotriene-C(4) hydrolase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); cellular response to oxidative stress (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH aflatoxins-related hepatocellular carcinoma (ortholog); Albuminuria (ortholog); alcohol dependence (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955455 8082578 8099523 + 102004455 AGCD01045873;GBCQ01011883;XM_005396394 XP_005396451 MODEL 8710178 protein-coding Dlk1 delta like non-canonical Notch ligand 1 INVOLVED IN bone mineralization (ortholog); cell differentiation (ortholog); embryonic skeletal system development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; Notch signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH biliary atresia (ortholog); central precocious puberty (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cytoplasm (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955627 37886 43730 - 102024746 AGCD01077479;GBDF01049151;GBDK01224500;XM_005415026 XP_005415083 MODEL 8756219 ncrna LOC102010568 uncharacterized LOC102010568 NW_004955413 250256 256400 + 102010568 AGCD01013452;AGCD01013453;GBDF01303978;XR_260042 MODEL 8763919 pseudo LOC102017827 dnaJ homolog subfamily A member 1 pseudogene NW_004955448 18477355 18478527 + 102017827 AGCD01041746 MODEL 8784006 protein-coding Kctd17 potassium channel tetramerization domain containing 17 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); positive regulation of cilium assembly (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); lung cancer (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955413 23568540 23578292 + 102026847 AGCD01014332;GBDI01160354;XM_005379184;XM_005379185;XM_005379186;XM_005379187;XM_005379188;XM_005379191;XR_001233020 XP_005379241;XP_005379242;XP_005379243;XP_005379244;XP_005379245;XP_005379248 MODEL 8935611 pseudo LOC102004666 zinc finger and SCAN domain-containing protein 4-like NW_004955405 11735072 11756169 - 102004666 AGCD01004838;AGCD01004839;AGCD01004840;AGCD01004841 MODEL 8974282 protein-coding Abcb6 ATP binding cassette subfamily B member 6 (LAN blood group) ENCODES a protein that exhibits ABC-type heme transporter activity (ortholog); ABC-type transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN brain development (ortholog); cellular detoxification of cadmium ion (ortholog); heme B biosynthetic process (ortholog); ASSOCIATED WITH acute intermittent porphyria (ortholog); acute myeloid leukemia (ortholog); acute porphyria (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955453 14215104 14222338 + 102019355 AGCD01044859;GBDF01049213;XM_005395577;XM_013519849 XP_005395634;XP_013375303 MODEL 9052553 ncrna LOC102004298 uncharacterized LOC102004298 NW_004955425 26216844 26372863 + 102004298 AGCD01025943;AGCD01025944;AGCD01025945;AGCD01025946;AGCD01025947;AGCD01025948;GBDK01344416;XR_001234297;XR_001234298 MODEL 8860547 trna Trnag-ccc transfer RNA glycine (anticodon CCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955442;NW_004955424 16570981;14887366 16571051;14887436 +;+ 101978846 AGCD01024664;AGCD01037901 MODEL 8962295 protein-coding Antxr2 ANTXR cell adhesion molecule 2 INVOLVED IN collagen fibril organization (ortholog); collagen metabolic process (ortholog); single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosing spondylitis (ortholog); anthrax disease (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); external side of plasma membrane (ortholog) NW_004955433 4212729 4345611 - 102024717 AGCD01031456;AGCD01031457;AGCD01031458;AGCD01031459;AGCD01031460;AGCD01031461;GBCE01137016;GBDJ01080911;XM_005388217 XP_005388274 MODEL 39133845 misc_rna 7SK 7SK RNA 9064995 protein-coding Lmf2 lipase maturation factor 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955413 33487970 33492033 - 102003532 AGCD01014672;GBDK01128390;XM_005379576 XP_005379633 MODEL 8753880 protein-coding Add2 adducin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cytoskeletal adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH hereditary spherocytosis type 1 (ortholog); hypertension (ortholog); IgA glomerulonephritis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); F-actin capping protein complex (ortholog); glutamatergic synapse (ortholog) NW_004955424 14411279 14517813 + 102004179 AGCD01024654;GBDI01196110;XM_005385610;XM_005385611;XM_013514748 XP_005385667;XP_005385668;XP_013370202 MODEL 8709250 ncrna LOC102009395 uncharacterized LOC102009395 NW_004955422 28736276 28739914 + 102009395 AGCD01023368;GBDF01220110;XR_260928 MODEL 8710221 protein-coding Cnga1 cyclic nucleotide gated channel subunit alpha 1 ENCODES a protein that exhibits cAMP binding (ortholog); cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); INVOLVED IN membrane depolarization (ortholog); regulation of cytosolic calcium ion concentration (ortholog); spermatogenesis (ortholog); PARTICIPATES IN altered visual phototransduction pathway; calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH retinitis pigmentosa (ortholog); retinitis pigmentosa 49 (ortholog); FOUND IN intracellular cyclic nucleotide activated cation channel complex (ortholog); membrane (ortholog); photoreceptor outer segment (ortholog) NW_004955443 615061 649693 + 102026484 AGCD01038117;XM_005391887 XP_005391944 MODEL 8887929 protein-coding Cd3e CD3e molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); cerebellum development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH CD3epsilon deficiency (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); cell body (ortholog); cell-cell junction (ortholog) NW_004955412 19464666 19476425 + 102007874 AGCD01012953;AGCD01012954;GBDI01016643;XM_005378235;XM_013511255 XP_005378292;XP_013366709 MODEL 8719926 pseudo LOC102012938 60S ribosomal protein L37a-like NW_004955464 13764223 13764774 + 102012938 AGCD01050293 MODEL 8842657 protein-coding Copb1 coat protein complex I subunit beta 1 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Baralle-Macken Syndrome (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955414 29626314 29661453 - 102023143 AGCD01015709;AGCD01015710;GBBH01065781;XM_005380331 XP_005380388 MODEL 8753437 pseudo LOC102011337 transcription elongation factor B polypeptide 1 pseudogene NW_004955502 352527 352808 - 102011337 AGCD01064237;XM_005406918 MODEL 8986535 protein-coding Clca2 chloride channel accessory 2 ENCODES a protein that exhibits chloride channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN chloride transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); Lung Neoplasms (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog) NW_004955423 7729032 7760340 - 102021778 AGCD01023611;GBCC01011126;XM_005385129 XP_005385186 MODEL 153211027 protein-coding IGLV3-1 immunoglobulin lambda variable 3-1 8901788 ncrna LOC102006811 uncharacterized LOC102006811 NW_004955514 2676803 2682633 - 102006811 AGCD01067085;GBBH01015914;XR_001231769;XR_001231770;XR_001231771 MODEL 8849285 protein-coding Jund JunD proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); cardiomyopathy (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955524 3176849 3177936 + 102021168 AGCD01068864;GBBH01001664;GBCE01004168;XM_005409566 XP_005409623 MODEL 9000006 protein-coding Caly calcyon neuron specific vesicular protein ENCODES a protein that exhibits clathrin light chain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); clathrin coat assembly (ortholog); positive regulation of clathrin coat assembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); attention deficit hyperactivity disorder (ortholog); essential hypertension (ortholog); FOUND IN axon (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) NW_004955477 10983602 10993371 - 102003652 AGCD01055712;AGCD01055713;GBCE01072507;GBDF01305094;XM_013503059 XP_013358513 MODEL 8773021 protein-coding Cbr4 carbonyl reductase 4 ENCODES a protein that exhibits 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); NAD(P)H dehydrogenase (quinone) activity (ortholog); NADPH binding (ortholog); INVOLVED IN daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxidoreductase complex (ortholog) NW_004955403 37201474 37226414 + 102007722 AGCD01002564;AGCD01002565;GBDF01005826;XM_005373573;XM_005373574 XP_005373630;XP_005373631 MODEL 8710684 protein-coding Fermt1 FERM domain containing kindlin 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN basement membrane organization (ortholog); cell adhesion (ortholog); establishment of epithelial cell polarity (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Atrophy (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell junction (ortholog); cell periphery (ortholog); cytoplasm (ortholog) NW_004955415 16447921 16483221 - 102017978 AGCD01016382;AGCD01016383;AGCD01016384;AGCD01016385;AGCD01016386;AGCD01016387;GBBH01008568;GBDK01181773;XM_013512377 XP_013367831 MODEL 8951818 protein-coding Chl1 cell adhesion molecule L1 like ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axon guidance (ortholog); axon regeneration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN apical part of cell (ortholog); dendrite (ortholog) NW_004955421 12763432 12957852 - 102024015 AGCD01021928;AGCD01021929;AGCD01021930;AGCD01021931;AGCD01021932;AGCD01021933;GBDI01106875;XM_005383757;XM_005383758;XM_005383759;XM_005383760;XM_005383761;XM_013513790;XM_013513791;XM_013513792 XP_005383814;XP_005383815;XP_005383816;XP_005383817;XP_005383818;XP_013369244;XP_013369245;XP_013369246 MODEL 8861444 ncrna LOC102008279 uncharacterized LOC102008279 NW_004955450 14296448 14299942 - 102008279 AGCD01042742;GBDF01052413;XR_001235869;XR_001235870 MODEL 8927324 protein-coding Amelx amelogenin X-linked ENCODES a protein that exhibits calcium ion binding (ortholog); growth factor activity (ortholog); hydroxyapatite binding (ortholog); INVOLVED IN amelogenesis (ortholog); cell adhesion (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1E (ortholog); autosomal dominant hypocalcemia (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endocytic vesicle (ortholog) NW_004955544 1974889 1979063 - 102009545 AGCD01071732;XM_005411402 XP_005411459 MODEL 8799971 protein-coding Cer1 cerberus 1, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); morphogen activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); anterior/posterior pattern specification (ortholog); bone mineralization (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH ovarian cancer (ortholog); Spinal Fractures (ortholog); FOUND IN extracellular region (ortholog) NW_004955434 17738281 17740823 - 102017376 AGCD01032540;XM_005388699 XP_005388756 MODEL 39131908 rrna 5S_rRNA 5S ribosomal RNA 8738712 protein-coding Abcb7 ATP binding cassette subfamily B member 7 ENCODES a protein that exhibits ABC-type iron-sulfur cluster transporter activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); iron ion transmembrane transport (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster export pathway; ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); Dwarfism (ortholog); FOUND IN ATP-binding cassette (ABC) transporter complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955562 1079884 1220806 - 102025401 AGCD01073961;AGCD01073962;AGCD01073963;AGCD01073964;AGCD01073965;AGCD01073966;AGCD01073967;GBCB01058565;XM_005413086 XP_005413143 MODEL 8809307 protein-coding Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); protein K11-linked ubiquitination (ortholog); protein K33-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955523 818535 874189 + 102017051 AGCD01068481;AGCD01068482;AGCD01068483;AGCD01068484;AGCD01068485;GBDF01006052;XM_005409388;XM_005409389;XM_005409390;XM_013507172 XP_005409445;XP_005409446;XP_005409447;XP_013362626 MODEL 8921651 protein-coding LOC102005702 chromosome unknown open reading frame, human C11orf58 ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955414 31621806 31642993 + 102005702 AGCD01015759;GBDF01005761;XM_005380367;XM_005380368 XP_005380424;XP_005380425 MODEL 8745311 protein-coding Ino80 INO80 complex ATPase subunit ENCODES a protein that exhibits alpha-tubulin binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 7870521 8020862 - 102003865 AGCD01017017;AGCD01017018;AGCD01017019;AGCD01017020;AGCD01017021;AGCD01017022;GBCE01141933;XM_005381275;XM_005381276;XM_013512574 XP_005381332;XP_005381333;XP_013368028 MODEL 39134241 misc_rna 7SK 7SK RNA 8984079 protein-coding Grm2 glutamate metabotropic receptor 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); glutamate receptor activity (ortholog); group II metabotropic glutamate receptor activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); cellular response to stress (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Binge Drinking (ortholog); Breast Cancer, Familial (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); glutamatergic synapse (ortholog) NW_004955532 3309034 3320954 + 102018642 AGCD01070277;GBDF01198062;XM_005410320;XM_005410321;XM_013507564 XP_005410377;XP_005410378;XP_013363018 MODEL 8942066 protein-coding Ccer2 coiled-coil glutamate rich protein 2 NW_004955468 614223 616989 + 102030060 AGCD01051719;GBDJ01278351;XM_005399803;XM_013522418 XP_005399860;XP_013377872 MODEL 8959313 ncrna LOC102012948 uncharacterized LOC102012948 NW_004955469 10456258 10462046 - 102012948 AGCD01052535;GBCE01121126;XR_001236982;XR_001236983;XR_263447 MODEL 8701675 protein-coding Eef1a2 eukaryotic translation elongation factor 1 alpha 2 ENCODES a protein that exhibits protein kinase binding (ortholog); translation elongation factor activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of lipid kinase activity (ortholog); regulation of postsynaptic specialization assembly (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Alzheimer's disease (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); eukaryotic translation elongation factor 1 complex (ortholog) NW_004955528 717338 726383 + 102010729 AGCD01069544;AGCD01069545;GBCB01005764;GBDF01110613;XM_005409964 XP_005410021 MODEL 39131771 rrna 5S_rRNA 5S ribosomal RNA 8949910 protein-coding Acox3 acyl-CoA oxidase 3, pristanoyl ENCODES a protein that exhibits acyl-CoA oxidase activity (ortholog); fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN peroxisome (ortholog) NW_004955514 2653502 2690452 + 102007262 AGCD01067085;GBDF01017532;XM_005408770;XM_005408774;XM_013506788;XM_013506789;XM_013506790;XM_013506791;XM_013506792;XM_013506793;XR_001231764;XR_001231765 XP_005408827;XP_005408831;XP_013362242;XP_013362243;XP_013362244;XP_013362245;XP_013362246;XP_013362247 MODEL 8828799 pseudo LOC102011339 actin filament-associated protein 1-like 2 pseudogene NW_004955503 4487948 4488394 + 102011339 AGCD01064669 MODEL 9048252 protein-coding C1qbp complement C1q binding protein ENCODES a protein that exhibits adrenergic receptor binding (ortholog); C5-methylcytidine-containing RNA reader activity (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); mitochondrial RNA catabolic process (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 10788142 10792272 - 102027161 AGCD01051583;GBDJ01090000;GBDK01129135;XM_013522096 XP_013377550 MODEL 8969211 pseudo LOC102003945 histone deacetylase 2-like NW_004955455 3394770 3415325 + 102003945 AGCD01045624;AGCD01045625;AGCD01045626 MODEL 10154021 protein-coding Ahnak2 AHNAK nucleoprotein 2 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN costamere (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955538 3305664 3315094 - 106147279 AGCD01071157;AGCD01071158;GBCQ01094345;GBDJ01075788;XM_013507883 XP_013363337 MODEL 39133971 misc_rna 7SK 7SK RNA 8878516 protein-coding Kctd18 potassium channel tetramerization domain containing 18 ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 913621 923631 + 102006411 AGCD01001712;GBCE01029918;GBDI01063246;XM_013511934 XP_013367388 MODEL 8972683 protein-coding Elac1 elaC ribonuclease Z 1 ENCODES a protein that exhibits 3'-tRNA processing endoribonuclease activity (ortholog); tRNA-specific ribonuclease activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); tRNA 3'-end processing (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH colorectal cancer (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955402 35904552 35918120 + 102021502 AGCD01000908;GBDK01193175;XM_005372936;XM_005372938;XM_005372939 XP_005372993;XP_005372995;XP_005372996 MODEL 9028218 protein-coding LOC102012951 olfactory receptor 52N2 NW_004955414 21777014 21940262 - 102012951 AGCD01015432;AGCD01015433;AGCD01015434;AGCD01015435;AGCD01015436;AGCD01015437;AGCD01015438;GBDF01075977;XM_005380109;XM_005380110;XM_005380111;XM_005380112;XM_013511697 XP_005380166;XP_005380167;XP_005380168;XP_005380169;XP_013367151 MODEL 39133846 misc_rna 7SK 7SK RNA 9020004 protein-coding Hunk hormonally up-regulated Neu-associated kinase ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955407 31439045 31555542 + 102015287 AGCD01007649;AGCD01007650;AGCD01007651;AGCD01007652;AGCD01007653;AGCD01007654;GBCE01063923;XM_013504110 XP_013359564 MODEL 8998965 protein-coding Add3 adducin 3 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein kinase C binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN positive regulation of cytoskeleton organization (ortholog); positive regulation of vasoconstriction (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); brain ischemia (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) NW_004955485 1216435 1273275 - 102017665 AGCD01058474;AGCD01058475;GBDF01128305;XM_005403759;XM_013504104 XP_005403816;XP_013359558 MODEL 8992388 protein-coding Atxn7l3b ataxin 7 like 3B INVOLVED IN regulation of gene expression (ortholog); FOUND IN cytoplasm (ortholog) NW_004955405 14093770 14097409 + 102007182 AGCD01004919;GBDF01050886;XM_005374326 XP_005374383 MODEL 8726053 protein-coding Cnga2 cyclic nucleotide gated channel subunit alpha 2 ENCODES a protein that exhibits cGMP binding (ortholog); identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); membrane depolarization (ortholog); potassium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); FOUND IN ciliary membrane (ortholog); intracellular cyclic nucleotide activated cation channel complex (ortholog); non-motile cilium membrane (ortholog) NW_004955498 7250514 7257701 + 102009400 AGCD01063146;GBBH01223843;XM_013505548 XP_013361002 MODEL 8964912 pseudo LOC102011785 protein BEX3-like NW_004955425 1246748 1250299 + 102011785 AGCD01025219 MODEL 9017153 pseudo LOC102009783 60S ribosomal protein L23a pseudogene NW_004955402 42724840 42797870 + 102009783 AGCD01001045;AGCD01001046;AGCD01001047;AGCD01001048;AGCD01001049;XR_259084 MODEL 9026647 protein-coding Epb41l1 erythrocyte membrane protein band 4.1 like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 11 (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955422 25338135 25456376 - 102028431 AGCD01023248;AGCD01023249;AGCD01023250;GBCE01186960;XM_005384755;XM_005384756;XM_005384758;XM_005384760;XM_013514214;XM_013514215;XM_013514216 XP_005384812;XP_005384813;XP_005384815;XP_005384817;XP_013369668;XP_013369669;XP_013369670 MODEL 39131436 protein-coding IGLV9-49 immunoglobulin lambda variable 9-49 8825686 pseudo LOC102010572 methionine adenosyltransferase 2 subunit beta pseudogene NW_004955467 10161772 10163152 + 102010572 AGCD01051547 MODEL 9057264 ncrna LOC102017828 uncharacterized LOC102017828 NW_004955402 45460545 45502507 - 102017828 AGCD01001136;AGCD01001137;AGCD01001138;AGCD01001139;AGCD01001140;GBDF01236164;XR_259092 MODEL 8702196 ncrna LOC102004673 uncharacterized LOC102004673 NW_004955406 23278454 23287251 - 102004673 AGCD01006169;GBDK01311017;XR_001230927;XR_259505 MODEL 8752632 protein-coding LOC102021903 olfactory receptor 1038 NW_004955511 1563422 1564360 - 102021903 AGCD01066371;XM_005408237 XP_005408294 MODEL 8962666 ncrna LOC102010573 uncharacterized LOC102010573 NW_004955468 2472919 2491755 + 102010573 AGCD01051821;AGCD01051822;AGCD01051823;GBDF01158088;XR_263379 MODEL 9045170 protein-coding LOC102008284 protocadherin gamma-B7-like NW_004957427 6 1475 - 102008284 AGCD01080823;GBDF01178990;XM_005415230 XP_005415287 MODEL 8839711 protein-coding LOC102007165 arylacetamide deacetylase-like NW_004955448 3194027 3221003 - 102007165 AGCD01041312;AGCD01041313;GBCC01001426;XM_005393039 XP_005393096 MODEL 9064101 protein-coding Lmln leishmanolysin like peptidase ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955420 11867034 11953303 - 102026643 AGCD01020841;AGCD01020842;AGCD01020843;AGCD01020844;AGCD01020845;AGCD01020846;AGCD01020847;AGCD01020848;GBCE01119901;GBCQ01076834;XM_013513591 XP_013369045 MODEL 8857548 pseudo LOC102009396 kinesin-associated protein 3 pseudogene NW_004955422 9676287 9678648 + 102009396 AGCD01022717 MODEL 8983348 protein-coding Antxrl ANTXR like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955510 6297209 6343033 - 102022727 AGCD01066305;GBDF01085762;XM_013506337;XM_013506338;XM_013506339;XM_013506340;XM_013506341 XP_013361791;XP_013361792;XP_013361793;XP_013361794;XP_013361795 MODEL 9014183 protein-coding Cdk5rap2 CDK5 regulatory subunit associated protein 2 ENCODES a protein that exhibits calmodulin binding (ortholog); gamma-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN brain development (ortholog); centriole replication (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autosomal recessive primary microcephaly (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955419 7412177 7606883 + 102028863 AGCD01019881;AGCD01019882;AGCD01019883;GBDF01010920;XM_005382603;XM_013513193;XM_013513194;XM_013513195;XM_013513196;XM_013513197;XM_013513198;XM_013513199;XM_013513200;XM_013513201 XP_005382660;XP_013368647;XP_013368648;XP_013368649;XP_013368650;XP_013368651;XP_013368652;XP_013368653;XP_013368654;XP_013368655 MODEL 8896051 protein-coding Etnk1 ethanolamine kinase 1 ENCODES a protein that exhibits ethanolamine kinase activity (ortholog); INVOLVED IN phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 18036646 18094875 + 102024781 AGCD01014167;GBDF01044052;XM_005379081 XP_005379138 MODEL 8929949 protein-coding Cd3g CD3g molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); establishment or maintenance of cell polarity (ortholog); protein transport (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Diarrhea 9 (ortholog); diffuse alopecia areata (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); plasma membrane (ortholog) NW_004955412 19486066 19496474 + 102008927 AGCD01012954;AGCD01012955;AGCD01012956;GBBH01061598;XM_005378239 XP_005378296 MODEL 10063798 ncrna LOC106149975 uncharacterized LOC106149975 NW_004955458 1973856 1978190 - 106149975 AGCD01047209;GBCQ01057482;XR_001236475 MODEL 9026321 protein-coding Abcb8 ATP binding cassette subfamily B member 8 ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN cell volume homeostasis (ortholog); mitochondrial potassium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN mitochondrial ATP-gated potassium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955491 5468855 5485568 + 102028644 AGCD01060484;GBCE01116645;XM_005404804;XM_005404805;XM_013504582 XP_005404861;XP_005404862;XP_013360036 MODEL 8726625 pseudo LOC102006814 cysteine-rich PDZ-binding protein pseudogene NW_004955433 2469951 2470255 - 102006814 AGCD01031393 MODEL 39134242 misc_rna 7SK 7SK RNA 8955756 protein-coding Grm3 glutamate metabotropic receptor 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); group II metabotropic glutamate receptor activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN cellular response to stress (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); dendritic spine (ortholog) NW_004955410 103774 185062 - 102012936 AGCD01010582;AGCD01010583;AGCD01010584;GBDK01309584;XM_013510486 XP_013365940 MODEL 8893510 protein-coding LOC102004305 olfactory receptor 9I1-like NW_004955511 3072937 3073479 + 102004305 AGCD01066440;XM_013506379 XP_013361833 MODEL 8820360 protein-coding LOC102008652 heterogeneous nuclear ribonucleoprotein A1-like NW_004955514 3637451 3647575 + 102008652 AGCD01067102;XM_013506747 XP_013362201 MODEL 8796651 trna Trnag-gcc transfer RNA glycine (anticodon GCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978844 AGCD01042230;AGCD01043711;AGCD01049456;AGCD01051475;AGCD01057629;AGCD01058153;AGCD01058182;AGCD01067339;AGCD01074351 MODEL 8713347 protein-coding Eef1akmt1 EEF1A lysine methyltransferase 1 ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog) NW_004955497 1509855 1540786 - 102012103 AGCD01062464;AGCD01062465;GBDK01144753;XM_005406311;XM_013505465 XP_005406368;XP_013360919 MODEL 9013223 protein-coding Kctd19 potassium channel tetramerization domain containing 19 INVOLVED IN male meiotic nuclear division (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN nucleus (ortholog) NW_004955484 9282976 9344882 + 102006915 AGCD01058414;AGCD01058415;GBDF01046564;XM_005403664;XM_013503893;XM_013503894 XP_005403721;XP_013359347;XP_013359348 MODEL 8824956 protein-coding Clcc1 chloride channel CLIC like 1 ENCODES a protein that exhibits chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN chloride transport (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955435 12387575 12408801 - 102021039 AGCD01033147;GBDK01016230;XM_005388837;XM_005388838;XM_005388839;XM_013516519;XM_013516521 XP_005388894;XP_005388895;XP_005388896;XP_013371973;XP_013371975 MODEL 9066185 protein-coding Dlk2 delta like non-canonical Notch ligand 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955437 9297557 9302581 - 102007813 AGCD01034524;AGCD01034525;GBCC01001936;XM_005389766;XM_005389767;XM_013516814;XM_013516815 XP_005389823;XP_005389824;XP_013372268;XP_013372269 MODEL 8957362 protein-coding Arf1 ARF GTPase 1 ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN actin filament organization (ortholog); COPI-coated vesicle budding (ortholog); dendritic spine organization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell leading edge (ortholog); COPI-coated vesicle (ortholog); cytoplasmic side of trans-Golgi network membrane (ortholog) NW_004955581 319942 335112 - 102015903 AGCD01075667;GBDF01010336;XM_005414242 XP_005414299 MODEL 8936003 protein-coding Ino80b INO80 complex subunit B INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN Ino80 complex (ortholog); nuclear body (ortholog); nucleolus (ortholog) NW_004955424 11324741 11327466 - 102021896 AGCD01024563;GBCE01116801;XM_013514657 XP_013370111 MODEL 8733522 protein-coding Ggt5 gamma-glutamyltransferase 5 ENCODES a protein that exhibits glutathione gamma-glutamate hydrolase (ortholog); leukotriene-C(4) hydrolase activity (ortholog); peptidyltransferase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); fatty acid metabolic process (ortholog); glutathione catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955455 8101251 8125597 + 102006313 AGCD01045873;GBCE01076579;XM_005396402;XM_005396403;XM_005396404;XM_005396405 XP_005396459;XP_005396460;XP_005396461;XP_005396462 MODEL 8879723 protein-coding Adgb androglobin INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN sperm annulus (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955439 14144056 14268983 - 102019108 AGCD01035972;AGCD01035973;GBDF01081438;XM_005390627;XM_013517404;XM_013517405;XM_013517406;XM_013517407 XP_005390684;XP_013372858;XP_013372859;XP_013372860;XP_013372861 MODEL 8965817 protein-coding Camk1 calcium/calmodulin dependent protein kinase I ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); nucleocytoplasmic transport (ortholog); positive regulation of dendritic spine development (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955561 1282970 1292710 - 102007710 AGCD01073845;AGCD01073846;GBBH01141570;GBDF01058161;XM_013509086 XP_013364540 MODEL 8905654 protein-coding Auh AU RNA binding methylglutaconyl-CoA hydratase ENCODES a protein that exhibits enoyl-CoA hydratase activity (ortholog); methylglutaconyl-CoA hydratase activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 1 (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955515 971778 1124019 + 102006064 AGCD01067218;AGCD01067219;AGCD01067220;GBCQ01041316;GBCQ01041319;XM_013506890;XM_013506891 XP_013362344;XP_013362345 MODEL 8724659 protein-coding LOC102009784 small proline-rich protein 2E NW_004955592 315272 316198 + 102009784 AGCD01076302;XM_005414611 XP_005414668 MODEL 39131772 rrna 5S_rRNA 5S ribosomal RNA 8789735 protein-coding Cbs cystathionine beta-synthase ENCODES a protein that exhibits carbon monoxide binding (ortholog); cystathionine beta-synthase activity (ortholog); enzyme binding (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); blood vessel remodeling (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); PARTICIPATES IN cystathioninuria pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955407 38924355 38939790 + 102005896 AGCD01007815;GBDF01223345;XM_005375796;XM_005375797;XM_005375798;XM_005375799 XP_005375853;XP_005375854;XP_005375855;XP_005375856 MODEL 8856531 protein-coding Acoxl acyl-CoA oxidase like ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog) NW_004955470 2788249 3077277 - 102025234 AGCD01052682;AGCD01052683;AGCD01052684;AGCD01052685;AGCD01052686;AGCD01052687;AGCD01052688;AGCD01052689;GBDK01050330;XM_013522692 XP_013378146 MODEL 8703187 protein-coding LOC102017830 WAP four-disulfide core domain protein 18-like NW_004955451 195886 200393 + 102017830 AGCD01042928;GBCC01009398;XM_005393904;XM_005393905 XP_005393961;XP_005393962 MODEL 9036679 pseudo LOC102003946 acyl-CoA-binding domain-containing protein 6 pseudogene NW_004955407 13736680 13744398 - 102003946 AGCD01007152 MODEL 39133972 misc_rna 7SK 7SK RNA 8729936 protein-coding Cercam cerebral endothelial cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955570 898157 925581 + 102025058 AGCD01074771;AGCD01074772;AGCD01074773;AGCD01074774;GBDI01149846;XM_005413539;XM_013509391;XM_013509392;XM_013509393;XM_013509394;XM_013509395 XP_005413596;XP_013364845;XP_013364846;XP_013364847;XP_013364848;XP_013364849 MODEL 9012073 protein-coding Ahr aryl hydrocarbon receptor ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); aryl hydrocarbon receptor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); blood circulation (ortholog); blood vessel development (ortholog); PARTICIPATES IN aryl hydrocarbon receptor signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); Adult Pancreatic Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear aryl hydrocarbon receptor complex (ortholog) NW_004955410 20428531 20459482 + 102021949 AGCD01011045;GBBH01163343;XM_013510570 XP_013366024 MODEL 8717872 protein-coding LOC102012953 olfactory receptor 491-like NW_004955414 23663348 23664286 - 102012953 AGCD01015514;XM_013511761 XP_013367215 MODEL 9058378 protein-coding Amer1 APC membrane recruitment protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); beta-catenin destruction complex binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); kidney development (ortholog); ASSOCIATED WITH cleft palate (ortholog); colorectal cancer (ortholog); complex cortical dysplasia with other brain malformations (ortholog); FOUND IN nuclear body (ortholog); plasma membrane (ortholog) NW_004955475 4451094 4470750 + 102004699 AGCD01054880;GBDI01368674;XM_005401556;XM_005401557;XM_005401558;XM_005401559;XM_005401560;XM_013502871 XP_005401613;XP_005401614;XP_005401615;XP_005401616;XP_005401617;XP_013358325 MODEL 8811238 pseudo LOC102010574 sodium channel modifier 1 pseudogene NW_004955413 9333530 9334670 - 102010574 AGCD01013903 MODEL 8727317 protein-coding LOC102005703 double-strand break repair protein MRE11A-like NW_004955414 105311 171913 + 102005703 AGCD01014702;AGCD01014703;AGCD01014704;AGCD01014705;AGCD01014706;GBCE01032230;GBDF01042621;XM_013512034 XP_013367488 MODEL 39133847 misc_rna 7SK 7SK RNA 8842976 ncrna LOC102007168 uncharacterized LOC102007168 NW_004955592 171448 185769 + 102007168 AGCD01076300;AGCD01076301;GBDK01432229;XR_265130 MODEL 8793780 protein-coding Jup junction plakoglobin ENCODES a protein that exhibits alpha-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 12 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog) NW_004955451 15993055 16004152 - 102006196 AGCD01043645;AGCD01043646;GBDF01123916;GBDK01018922;XM_013519431 XP_013374885 MODEL 8822495 protein-coding Hus1 HUS1 checkpoint clamp component INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN checkpoint clamp complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955456 5465180 5476380 + 102008597 AGCD01046330;GBCQ01154034;GBCQ01154045;XM_005396631 XP_005396688 MODEL 8746305 pseudo LOC102011791 nuclear receptor-binding factor 2-like NW_004955512 4113871 4117507 - 102011791 AGCD01066729 MODEL 8999165 protein-coding Copb2 coat protein complex I subunit beta 2 ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN COPI vesicle coat (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955508 6201989 6231840 + 102025604 AGCD01065917;AGCD01065918;GBDF01046821;XM_005407784 XP_005407841 MODEL 8797314 protein-coding Epb41l2 erythrocyte membrane protein band 4.1 like 2 ENCODES a protein that exhibits PH domain binding (ortholog); spectrin binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); COP9 signalosome (ortholog) NW_004955436 11650584 11805822 - 102030344 AGCD01033818;AGCD01033819;AGCD01033820;GBBH01093601;XM_013516681 XP_013372135 MODEL 10331628 ncrna LOC106149976 uncharacterized LOC106149976 NW_004955458 4823190 4826267 - 106149976 AGCD01047441;XR_001236476 MODEL 9038632 protein-coding Abcb9 ATP binding cassette subfamily B member 9 ENCODES a protein that exhibits ABC-type oligopeptide transporter activity (ortholog); ABC-type peptide transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); peptide metabolic process (ortholog); peptide transport (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955482 5817334 5838642 + 102024229 AGCD01057349;AGCD01057350;GBBH01183746;GBDF01306028;XM_005403060;XM_013503662;XM_013503663 XP_005403117;XP_013359116;XP_013359117 MODEL 39134243 misc_rna 7SK 7SK RNA 8815342 protein-coding Cchcr1 coiled-coil alpha-helical rod protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia areata (ortholog); amphetamine abuse (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955583 979138 989267 - 102025526 AGCD01075876;GBCE01153941;XM_013509809;XM_013509810;XM_013509811;XM_013509812;XM_013509813;XM_013509814;XM_013509815;XM_013509816;XM_013509817;XM_013509818;XM_013509819;XM_013509820 XP_013365263;XP_013365264;XP_013365265;XP_013365266;XP_013365267;XP_013365268;XP_013365269;XP_013365270;XP_013365271;XP_013365272;XP_013365273;XP_013365274 MODEL 9050479 ncrna LOC102011343 uncharacterized LOC102011343 NW_004955507 2011410 2055347 - 102011343 AGCD01065577;AGCD01065578;GBDK01390619;XR_001231618;XR_264370 MODEL 39131909 rrna 5S_rRNA 5S ribosomal RNA 8978313 protein-coding Aunip aurora kinase A and ninein interacting protein ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of double-strand break repair via nonhomologous end joining (ortholog); spindle organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955452 5323345 5336589 - 102008686 AGCD01044018;GBDK01198486;XM_005394827;XM_005394828;XM_013519653 XP_005394884;XP_005394885;XP_013375107 MODEL 39131773 rrna 5S_rRNA 5S ribosomal RNA 8822883 protein-coding Elac2 elaC ribonuclease Z 2 ENCODES a protein that exhibits tRNA-specific ribonuclease activity (ortholog); INVOLVED IN mitochondrial tRNA 3'-end processing (ortholog); tRNA 3'-end processing (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoribonuclease complex (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955467 4406947 4428769 + 102023131 AGCD01051367;AGCD01051368;GBCQ01066161;XM_005399338;XM_005399342;XM_013522152 XP_005399395;XP_005399399;XP_013377606 MODEL 8719462 protein-coding Lmna lamin A/C ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase 1 binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular senescence (ortholog); DNA double-strand break attachment to nuclear envelope (ortholog); PARTICIPATES IN atherosclerosis pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); achalasia (ortholog); anxiety disorder (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear lamina (ortholog) NW_004955545 2290076 2310982 + 102018770 AGCD01071894;AGCD01071895;GBBH01034310;XM_005411648;XM_013508332 XP_005411705;XP_013363786 MODEL 8726125 protein-coding Cdk5rap3 CDK5 regulatory subunit associated protein 3 ENCODES a protein that exhibits cyclin binding (ortholog); MDM2/MDM4 family protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN apoptotic nuclear changes (ortholog); cell population proliferation (ortholog); definitive erythrocyte differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 13160811 13170012 - 102010329 AGCD01043455;AGCD01043456;GBDJ01011824;XM_005394252 XP_005394309 MODEL 9033623 protein-coding Cd4 CD4 molecule ENCODES a protein that exhibits coreceptor activity (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); cellular response to ionomycin (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute myeloid leukemia (ortholog); AIDS-Related Opportunistic Infections (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 4400326 4422110 + 102003427 AGCD01013613;GBDJ01136149;XM_005378829 XP_005378886 MODEL 8866316 protein-coding Fermt2 FERM domain containing kindlin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); cell adhesion (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); angle-closure glaucoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955409 10285780 10327286 + 102007863 AGCD01009464;GBDJ01002066;XM_005376773 XP_005376830 MODEL 9024714 pseudo LOC102006815 peroxiredoxin-1 pseudogene NW_004955434 1326675 1356641 - 102006815 AGCD01032061;AGCD01032062;AGCD01032063 MODEL 8758135 protein-coding C1qc complement C1q C chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); negative regulation of granulocyte differentiation (ortholog); negative regulation of macrophage differentiation (ortholog); ASSOCIATED WITH C1q Deficiency (ortholog); C1q Deficiency 3 (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); complement component C1q complex (ortholog) NW_004955452 2759079 2762522 + 102009794 AGCD01043903;GBDI01004925;XM_005394744 XP_005394801 MODEL 8811974 protein-coding Ggt6 gamma-glutamyltransferase 6 PARTICIPATES IN glutathione metabolic pathway; glutathione synthase deficiency pathway; glutathionuria disease pathway; ASSOCIATED WITH colorectal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955467 12385525 12388806 + 102011296 AGCD01051632;GBDJ01280029;XM_005399682;XM_005399683 XP_005399739;XP_005399740 MODEL 8915544 protein-coding Chlsn cholesin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN negative regulation of cholesterol biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955460 8714109 8839162 - 102015813 AGCD01048531;AGCD01048532;GBDF01125762;XM_005397799;XM_013521224;XM_013521225 XP_005397856;XP_013376678;XP_013376679 MODEL 8937977 protein-coding Adgra1 adhesion G protein-coupled receptor A1 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955477 10721635 10761357 + 102028188 AGCD01055706;GBDF01186692;XM_005402051;XM_005402052 XP_005402108;XP_005402109 MODEL 8852062 pseudo LOC102021905 ATP synthase mitochondrial F1 complex assembly factor 1 pseudogene NW_004955432 3069152 3074952 + 102021905 AGCD01030628 MODEL 8851530 protein-coding Camk1d calcium/calmodulin dependent protein kinase ID ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955462 391235 819240 + 102007201 AGCD01049078;AGCD01049079;AGCD01049080;AGCD01049081;AGCD01049082;AGCD01049083;AGCD01049084;AGCD01049085;AGCD01049086;AGCD01049087;AGCD01049088;GBDF01211716;XM_005398082;XM_005398083;XM_005398084;XM_005398085;XM_013521454 XP_005398139;XP_005398140;XP_005398141;XP_005398142;XP_013376908 MODEL 8898873 trna Trnag-ucc transfer RNA glycine (anticodon UCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955462;NW_004955467;NW_004955495 59658;14719232;8709239;4280962 59729;14719303;8709310;4281033 -;-;-;- 101978845 AGCD01049456;AGCD01051466;AGCD01061910;AGCD01074502 MODEL 8862910 ncrna LOC102004307 uncharacterized LOC102004307 NW_004955431 5084453 5109317 - 102004307 AGCD01030014;AGCD01030015;GBDF01050896;XR_001234597;XR_261453;XR_261454;XR_261455 MODEL 8777398 ncrna LOC102004680 uncharacterized LOC102004680 NW_004955461 2769426 3001729 + 102004680 AGCD01048841;AGCD01048842;AGCD01048843;AGCD01048844;AGCD01048845;GBCE01007435;XR_001236575;XR_001236576;XR_001236577;XR_001236578;XR_001236579;XR_001236580;XR_263075 MODEL 9054408 protein-coding LOC102017831 protocadherin alpha-4-like NW_004955611 288464 291968 + 102017831 AGCD01077159;XM_013510123 XP_013365577 MODEL 8885489 ncrna LOC102008287 uncharacterized LOC102008287 NW_004955406 43139560 43143818 + 102008287 AGCD01006726;GBDF01122753;XR_259542 MODEL 8838051 ncrna LOC102009397 uncharacterized LOC102009397 NW_004955423 12414062 12469348 + 102009397 AGCD01023718;GBDK01419002;XR_260967 MODEL 39131774 rrna 5S_rRNA 5S ribosomal RNA 8734398 protein-coding Etnk2 ethanolamine kinase 2 ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); multicellular organism growth (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955406 39996850 40013753 - 102017842 AGCD01006650;GBDK01051887;XM_005375285 XP_005375342 MODEL 8947631 pseudo LOC102017837 uncharacterized LOC102017837 NW_004955404 7713697 7732135 - 102017837 AGCD01003342 MODEL 8887376 protein-coding Clcf1 cardiotrophin like cytokine factor 1 ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cell surface receptor signaling pathway (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH cold-induced sweating syndrome (ortholog); cold-induced sweating syndrome 2 (ortholog); COVID-19 (ortholog); FOUND IN CNTFR-CLCF1 complex (ortholog); CRLF-CLCF1 complex (ortholog); extracellular region (ortholog) NW_004955422 18097779 18108628 + 102020812 AGCD01022937;GBDJ01016548;XM_005384338;XM_005384339 XP_005384395;XP_005384396 MODEL 8791245 protein-coding Dll1 delta like canonical Notch ligand 1 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN astrocyte development (ortholog); cell-cell signaling (ortholog); cerebellar molecular layer formation (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955411 3478943 3486541 + 102017105 AGCD01011552;GBDK01317392;XM_005377625 XP_005377682 MODEL 8857340 protein-coding Igsf1 immunoglobulin superfamily member 1 ENCODES a protein that exhibits activin receptor antagonist activity (ortholog); coreceptor activity (ortholog); inhibin binding (ortholog); INVOLVED IN negative regulation of activin receptor signaling pathway (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); congenital hypothyroidism (ortholog); FOUND IN membrane (ortholog) NW_004955473 3702471 3715506 + 102030300 AGCD01053935;GBDF01237848;XM_005401222;XM_013523048 XP_005401279;XP_013378502 MODEL 8972191 protein-coding Ino80c INO80 complex subunit C INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN fibrillar center (ortholog); Ino80 complex (ortholog); MLL1 complex (ortholog) NW_004955402 22189943 22210315 - 102007288 AGCD01000603;AGCD01000604;GBDI01168667;XM_005372802;XM_013509834;XM_013509865 XP_005372859;XP_013365288;XP_013365319 MODEL 9009786 protein-coding Grm4 glutamate metabotropic receptor 4 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); Nerve Degeneration (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); cytoplasmic vesicle (ortholog); dendritic shaft (ortholog) NW_004955437 2358839 2449145 - 102013211 AGCD01034264;AGCD01034265;AGCD01034266;AGCD01034267;GBDF01040768;XM_005389511;XM_013516709 XP_005389568;XP_013372163 MODEL 8731398 pseudo LOC102009787 glucose 1,6-bisphosphate synthase pseudogene NW_004955402 47456121 47465974 - 102009787 AGCD01001183;AGCD01001184;AGCD01001185;AGCD01001186;AGCD01001187 MODEL 8905600 protein-coding Epb41l3 erythrocyte membrane protein band 4.1 like 3 INVOLVED IN axon development (ortholog); myelin maintenance (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN axolemma (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955402 5459586 5674745 + 102005981 AGCD01000136;AGCD01000137;GBDF01004195;XM_005372623;XM_005372625;XM_005372626;XM_005372627;XM_005372629;XM_005372630;XM_013516834;XM_013516878;XM_013516964;XM_013517037;XM_013517088;XM_013517123;XM_013517195;XM_013517228;XM_013517264;XM_013517295;XM_013517317;XM_013517351;XM_013517381;XM_013517413;XM_013517440 XP_005372680;XP_005372682;XP_005372683;XP_005372684;XP_005372686;XP_005372687;XP_013372288;XP_013372332;XP_013372418;XP_013372491;XP_013372542;XP_013372577;XP_013372649;XP_013372682;XP_013372718;XP_013372749;XP_013372771;XP_013372805;XP_013372835;XP_013372867;XP_013372894 MODEL 8960763 protein-coding Ggt7 gamma-glutamyltransferase 7 INVOLVED IN negative regulation of response to oxidative stress (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955422 26503755 26529363 + 102018297 AGCD01023288;AGCD01023289;GBBH01177567;XM_005384815;XM_005384816;XM_013514055 XP_005384872;XP_005384873;XP_013369509 MODEL 8962494 protein-coding Eef1akmt2 EEF1A lysine methyltransferase 2 ENCODES a protein that exhibits methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955477 2739310 2779184 - 102005371 AGCD01055526;AGCD01055527;AGCD01055528;AGCD01055529;AGCD01055530;AGCD01055531;AGCD01055532;GBBH01222270;XM_005401982 XP_005402039 MODEL 8714451 pseudo LOC102003947 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955408 862783 863268 + 102003947 AGCD01007937 MODEL 8780614 protein-coding Kctd2 potassium channel tetramerization domain containing 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955553 1899533 1918534 + 102005086 AGCD01072904;AGCD01072905;GBCE01098286;GBDF01087330;XM_013508657 XP_013364111 MODEL 9001914 protein-coding Aup1 AUP1 lipid droplet regulating VLDL assembly factor ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN autophagosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 11259288 11262413 + 102022511 AGCD01024559;GBDI01001881;XM_005385487;XM_005385488;XM_013514652;XM_013514653;XM_013514654 XP_005385544;XP_005385545;XP_013370106;XP_013370107;XP_013370108 MODEL 8891906 protein-coding Cnga3 cyclic nucleotide gated channel subunit alpha 3 ENCODES a protein that exhibits cadherin binding (ortholog); cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); INVOLVED IN inorganic cation import across plasma membrane (ortholog); membrane depolarization (ortholog); monoatomic cation transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 1 (ortholog); achromatopsia 2 (ortholog); FOUND IN axon initial segment (ortholog); dendrite (ortholog); glial cell projection (ortholog) NW_004955470 4884054 4907151 + 102029955 AGCD01052740;GBDI01028306;XM_013522702 XP_013378156 MODEL 8860198 pseudo LOC102012954 SAP domain-containing ribonucleoprotein pseudogene NW_004955472 1335239 1335980 - 102012954 AGCD01053386 MODEL 8875498 pseudo LOC102010575 60S ribosomal protein L19 pseudogene NW_004955414 19517744 19518919 - 102010575 AGCD01015321 MODEL 8868588 pseudo LOC102005705 selenoprotein T pseudogene NW_004955474 8104963 8107680 + 102005705 AGCD01054542 MODEL 39133848 misc_rna 7SK 7SK RNA 8888912 protein-coding LOC102011792 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 NW_004955431 5628023 5671009 + 102011792 AGCD01030037;AGCD01030038;XM_013515893;XM_013515894 XP_013371347;XP_013371348 MODEL 8868619 pseudo LOC102007169 N-acetylglucosamine-6-sulfatase pseudogene NW_004955402 44394601 44397598 - 102007169 AGCD01001113 MODEL 8985571 protein-coding Kalrn kalirin RhoGEF kinase ENCODES a protein that exhibits enzyme binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axonogenesis (ortholog); habituation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebral atherosclerosis (ortholog); cerebral infarction (ortholog); FOUND IN glutamatergic synapse (ortholog); neuronal cell body (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955427 23184751 23823128 + 102016828 AGCD01027482;AGCD01027483;AGCD01027484;AGCD01027485;AGCD01027486;AGCD01027487;AGCD01027488;AGCD01027489;AGCD01027490;AGCD01027491;AGCD01027492;AGCD01027493;GBDJ01071026;XM_005386533;XM_005386534;XM_005386535;XM_005386536;XM_005386537;XM_005386538;XM_005386539;XM_005386540;XM_005386541;XM_013515182;XM_013515183 XP_005386590;XP_005386591;XP_005386592;XP_005386593;XP_005386594;XP_005386595;XP_005386596;XP_005386597;XP_005386598;XP_013370636;XP_013370637 MODEL 8795510 protein-coding Arf3 ARF GTPase 3 INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital heart disease (ortholog); Developmental Disabilities (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955500 7756936 7761953 - 102010178 AGCD01063945;GBBH01032565;XM_013505647 XP_013361101 MODEL 39134244 misc_rna 7SK 7SK RNA 8789174 pseudo LOC102008653 dual specificity mitogen-activated protein kinase kinase 1 pseudogene NW_004955515 3622654 3623565 - 102008653 AGCD01067294 MODEL 9046842 protein-coding Ahrr aryl-hydrocarbon receptor repressor INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nitric oxide metabolic process (ortholog); ASSOCIATED WITH hypertension (ortholog); Prenatal Exposure Delayed Effects (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955504 121739 191871 + 102019620 AGCD01064816;GBDJ01054828;XM_005406993;XM_005406995;XM_013505865 XP_005407050;XP_005407052;XP_013361319 MODEL 8999395 pseudo LOC102006818 protein SET-like NW_004955436 20911043 20912325 + 102006818 AGCD01034043 MODEL 8990865 protein-coding Ccin calicin INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 91 (ortholog); FOUND IN cytoskeletal calyx (ortholog); perinuclear theca (ortholog); sperm glycocalyx (ortholog) NW_004958151 6 1111 + 102012493 AGCD01081547;GBDF01128060;GBDK01343189;XM_005415237 XP_005415294 MODEL 8998011 pseudo LOC102011352 transcriptional coactivator YAP1-like NW_004955431 1758354 1764850 + 102011352 AGCD01029917 MODEL 8784308 protein-coding Dll3 delta like canonical Notch ligand 3 ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN compartment pattern specification (ortholog); negative regulation of astrocyte differentiation (ortholog); negative regulation of neurogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Congenital Abnormalities (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 70714 78831 - 102013276 AGCD01051680;AGCD01051681;GBDF01075164;XM_005400283 XP_005400340 MODEL 8766865 protein-coding Cbx1 chromobox 1 ENCODES a protein that exhibits enzyme binding (ortholog); histone H1K26me1 reader activity (ortholog); histone H1K26me2 reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Neurodevelopmental Disorders (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome, centromeric region (ortholog) NW_004955451 13066628 13083693 + 102009450 AGCD01043445;AGCD01043446;GBDF01128155;XM_005394249 XP_005394306 MODEL 39133973 misc_rna 7SK 7SK RNA 8982027 ncrna LOC102021906 uncharacterized LOC102021906 NW_004955433 3118317 3132395 - 102021906 AGCD01031413;AGCD01031414;GBCB01121567;XR_261550 MODEL 8872834 protein-coding Adgra2 adhesion G protein-coupled receptor A2 INVOLVED IN angiogenesis (ortholog); canonical Wnt signaling pathway (ortholog); central nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); Wnt signalosome (ortholog) NW_004955463 13514065 13549806 + 102011097 AGCD01049870;AGCD01049871;GBCE01052141;GBCQ01177598;XM_005398475 XP_005398532 MODEL 8842591 protein-coding Chm CHM Rab escort protein ENCODES a protein that exhibits protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN blood vessel development (ortholog); protein geranylgeranylation (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Choroideremia (ortholog); FOUND IN cytosol (ortholog); Rab-protein geranylgeranyltransferase complex (ortholog) NW_004955525 359393 563930 - 102017270 AGCD01068997;AGCD01068998;AGCD01068999;AGCD01069000;AGCD01069001;GBDI01106223;XM_005409721;XR_001231961 XP_005409778 MODEL 8772632 protein-coding Cerk ceramide kinase ENCODES a protein that exhibits ceramide kinase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN ceramide metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of trans-Golgi network membrane (ortholog); membrane (ortholog) NW_004955413 30658472 30693948 - 102014230 AGCD01014612;AGCD01014613;GBCE01076890;XM_005379519;XM_005379520 XP_005379576;XP_005379577 MODEL 8875091 protein-coding Camk1g calcium/calmodulin dependent protein kinase IG ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); endomembrane system (ortholog); plasma membrane (ortholog) NW_004955489 2604030 2629394 - 102025693 AGCD01059872;GBBH01066788;XM_005404544 XP_005404601 MODEL 8718576 protein-coding Amer2 APC membrane recruitment protein 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH stomach cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955497 4640343 4645314 - 102014466 AGCD01062583;AGCD01062584;GBDF01074697;XM_013505515 XP_013360969 MODEL 8844786 pseudo LOC102009401 CGG triplet repeat-binding protein 1-like NW_004955503 3186612 3188685 + 102009401 AGCD01064619 MODEL 9007009 protein-coding LOC102008288 keratin-associated protein 20-2-like NW_004955407 30178341 30178529 + 102008288 AGCD01007628;XM_005375644 XP_005375701 MODEL 39131775 rrna 5S_rRNA 5S ribosomal RNA 8953769 protein-coding Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits DNA binding (ortholog); histone ubiquitin ligase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); circadian regulation of gene expression (ortholog); negative regulation of mitochondrial fusion (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955475 550643 671771 - 102017655 AGCD01054700;AGCD01054701;AGCD01054702;AGCD01054703;AGCD01054704;GBCQ01058546;GBCQ01101761;XM_013502813;XM_013502814;XM_013502815;XM_013502816;XM_013502817;XM_013502819 XP_013358267;XP_013358268;XP_013358269;XP_013358270;XP_013358271;XP_013358273 MODEL 9007454 protein-coding Etnppl ethanolamine-phosphate phospho-lyase ENCODES a protein that exhibits ethanolamine-phosphate phospho-lyase activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); ceramide phosphoethanolamine catabolic process (ortholog); gene expression (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog) NW_004955496 1274929 1292802 + 102028103 AGCD01062252;GBDF01054944;XM_005406194 XP_005406251 MODEL 8952983 protein-coding Cd40 CD40 molecule ENCODES a protein that exhibits antigen binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell mediated immunity (ortholog); CD40 signaling pathway (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myocarditis (ortholog); allergic rhinitis (ortholog); FOUND IN CD40 receptor complex (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955445 11191817 11202156 - 102021289 AGCD01039683;GBDJ01180170;XM_005392385;XM_013518290 XP_005392442;XP_013373744 MODEL 8928766 protein-coding Fermt3 FERM domain containing kindlin 3 ENCODES a protein that exhibits integrin binding (ortholog); lipid binding (ortholog); INVOLVED IN integrin activation (ortholog); integrin-mediated signaling pathway (ortholog); leukocyte cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); blood platelet disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN podosome (ortholog) NW_004955422 20854297 20870463 - 102020258 AGCD01023095;GBDF01125226;XM_005384637;XM_013513956 XP_005384694;XP_013369410 MODEL 9060478 protein-coding Abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type vitamin B12 transporter activity (ortholog); INVOLVED IN amygdala development (ortholog); amyloid-beta clearance (ortholog); amyloid-beta metabolic process (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955442 729322 858826 + 102027792 AGCD01037429;GBDF01153989;XM_005391080 XP_005391137 MODEL 8742840 protein-coding Anxa1 annexin A1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); alpha-beta T cell differentiation (ortholog); arachidonate secretion (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; ASSOCIATED WITH acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); asthma (ortholog); FOUND IN actin filament (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) NW_004955512 5686508 5703645 - 102007684 AGCD01066772;AGCD01066773;GBCE01002344;XM_005408325 XP_005408382 MODEL 10265557 ncrna LOC106149977 uncharacterized LOC106149977 NW_004955458 1257253 1258263 - 106149977 AGCD01047172;GBCQ01085023;XR_001236477 MODEL 8785571 pseudo LOC102004682 U1 small nuclear ribonucleoprotein C pseudogene NW_004955411 31410189 31410670 - 102004682 AGCD01012272 MODEL 8968369 protein-coding Lmnb1 lamin B1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); phospholipase binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); cellular response to corticosterone stimulus (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult onset demyelinating leukodystrophy (ortholog); Animal Disease Models (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) NW_004955521 4583691 4612271 + 102020157 AGCD01068273;GBBH01026773;XM_013507092 XP_013362546 MODEL 8918032 protein-coding Cdk6 cyclin dependent kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cell dedifferentiation (ortholog); DNA damage response (ortholog); gliogenesis (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN centrosome (ortholog); cyclin D1-CDK6 complex (ortholog); cyclin D2-CDK6 complex (ortholog) NW_004955432 9521794 9727772 - 102006488 AGCD01030907;AGCD01030908;AGCD01030909;AGCD01030910;AGCD01030911;AGCD01030912;AGCD01030913;AGCD01030914;GBBH01096372;GBCE01129882;XM_005388024;XM_013516028 XP_005388081;XP_013371482 MODEL 8981568 protein-coding Acp1 acid phosphatase 1 ENCODES a protein that exhibits acid phosphatase activity (ortholog); phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; riboflavin metabolic pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); conduct disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955487 290434 302405 + 102004285 AGCD01059216;GBDF01083460;XM_005404332;XM_005404333;XM_013504379 XP_005404389;XP_005404390;XP_013359833 MODEL 9012675 ncrna LOC102017839 uncharacterized LOC102017839 NW_004955405 39617278 39622813 - 102017839 AGCD01005502;GBDF01252390;XR_001235917 MODEL 8952717 pseudo LOC102012956 septin-2 pseudogene NW_004955474 8331644 8332821 - 102012956 AGCD01054549 MODEL 8739337 ncrna LOC102005707 uncharacterized LOC102005707 NW_004955478 5365809 5429517 + 102005707 AGCD01055871;AGCD01055872;GBDF01254563;XR_001230866;XR_263698 MODEL 8999857 protein-coding Clcn1 chloride voltage-gated channel 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); chloride transport (ortholog); muscle contraction (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); Becker disease (ortholog); FOUND IN plasma membrane (ortholog); sarcolemma (ortholog) NW_004955494 318137 349568 - 102024581 AGCD01061376;GBCB01002166;XM_005405361 XP_005405418 MODEL 9010191 protein-coding Igsf10 immunoglobulin superfamily member 10 INVOLVED IN ossification (ortholog); regulation of neuron migration (ortholog); tissue regeneration (ortholog); ASSOCIATED WITH autoimmune thyroiditis (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955448 2532973 2557650 - 102004340 AGCD01041283;GBDK01308425;XM_005393032;XM_005393033;XM_013518617 XP_005393089;XP_005393090;XP_013374071 MODEL 8724047 protein-coding Ino80d INO80 complex subunit D INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Ino80 complex (ortholog) NW_004955457 8913625 8983859 + 102017955 AGCD01046922;AGCD01046923;AGCD01046924;GBDK01343093;XM_005397001;XM_005397003 XP_005397058;XP_005397060 MODEL 8977964 protein-coding Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); positive regulation of autophagosome assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955435 12531651 12626969 + 102024373 AGCD01033150;AGCD01033151;AGCD01033152;AGCD01033153;AGCD01033154;AGCD01033155;AGCD01033156;AGCD01033157;AGCD01033158;GBDI01003986;XM_005388847;XM_005388848 XP_005388904;XP_005388905 MODEL 39134248 misc_rna 7SK 7SK RNA 8911222 protein-coding C1ql1 complement C1q like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); motor learning (ortholog); neuron remodeling (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); climbing fiber (ortholog); cytoplasm (ortholog) NW_004955451 17729106 17734657 - 102008049 AGCD01043769;GBBH01106823;GBCQ01122993;XM_005394651 XP_005394708 MODEL 15036843 trna Trnah-aug transfer RNA histidine(anticodon AUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978820 39131910 rrna 5S_rRNA 5S ribosomal RNA 9016001 pseudo LOC102004309 ESF1 homolog NW_004955432 19133089 19170480 - 102004309 AGCD01031169 MODEL 9003980 protein-coding Epb41l4a erythrocyte membrane protein band 4.1 like 4A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955418 2876345 3097365 + 102013606 AGCD01018777;AGCD01018778;AGCD01018779;GBCQ01099747;GBDF01195481;XM_005382155;XM_005382156;XM_005382157;XM_013513019 XP_005382212;XP_005382213;XP_005382214;XP_013368473 MODEL 8753307 protein-coding Dll4 delta like canonical Notch ligand 4 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve morphogenesis (ortholog); blood vessel lumenization (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 6 (ortholog) NW_004955416 7807049 7816346 + 102030417 AGCD01017013;GBCB01111083;XM_005381271 XP_005381328 MODEL 8902996 protein-coding Ghdc GH3 domain containing ASSOCIATED WITH hepatocellular carcinoma (ortholog); lymphoma (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955451 16247907 16251476 - 102016441 AGCD01043663;GBCB01111999;XM_005394453;XM_013519298 XP_005394510;XP_013374752 MODEL 9049614 protein-coding Kctd20 potassium channel tetramerization domain containing 20 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of phosphorylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955437 4127823 4141108 + 102010519 AGCD01034362;GBCQ01096384;XM_013516917 XP_013372371 MODEL 8716284 protein-coding Camk2a calcium/calmodulin dependent protein kinase II alpha ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); glutamate receptor binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); calcium ion transport (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; fibroblast growth factor signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN axon (ortholog); calcium- and calmodulin-dependent protein kinase complex (ortholog); dendrite (ortholog) NW_004955415 4247307 4307402 + 102017328 AGCD01015968;GBDF01299177;XM_005380581;XM_005380582 XP_005380638;XP_005380639 MODEL 8775881 protein-coding Cnga4 cyclic nucleotide gated channel subunit alpha 4 ENCODES a protein that exhibits cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); intracellularly cGMP-activated cation channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); potassium ion transport (ortholog); sensory perception of smell (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN intracellular cyclic nucleotide activated cation channel complex (ortholog); non-motile cilium membrane (ortholog); perikaryon (ortholog) NW_004955414 21977996 21986349 + 102017223 AGCD01015438;GBDF01276901;XM_005380124;XM_005380125;XM_005380126;XM_005380127 XP_005380181;XP_005380182;XP_005380183;XP_005380184 MODEL 8845557 ncrna LOC102008291 uncharacterized LOC102008291 NW_004955408 21058606 21068901 - 102008291 AGCD01008549;GBBH01016936;XR_001232367 MODEL 8706552 pseudo LOC102010577 fatty acid-binding protein, epidermal pseudogene NW_004955414 14243606 14244127 + 102010577 AGCD01015144 MODEL 8817328 ncrna LOC102011796 uncharacterized LOC102011796 NW_004955433 7192628 7234562 + 102011796 AGCD01031566;AGCD01031567;GBDF01254267;XR_001234703;XR_001234704;XR_261565 MODEL 39131776 rrna 5S_rRNA 5S ribosomal RNA 8790556 protein-coding Kank1 KN motif and ankyrin repeat domains 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell population proliferation (ortholog); cortical microtubule organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955434 5247278 5279043 + 102012236 AGCD01032187;AGCD01032188;GBCB01025517;GBCQ01097797;XM_005388591;XM_005388596 XP_005388648;XP_005388653 MODEL 9038875 ncrna LOC102005710 uncharacterized LOC102005710 NW_004955418 22750893 22756659 + 102005710 AGCD01019292;XR_260582 MODEL 9035373 protein-coding Arf4 ARF GTPase 4 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); GTP binding (ortholog); NAD+-protein-arginine ADP-ribosyltransferase activity (ortholog); INVOLVED IN apical protein localization (ortholog); cell migration (ortholog); dendritic spine development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955430 7288386 7319449 - 102015431 AGCD01029342;AGCD01029343;AGCD01029344;AGCD01029345;AGCD01029346;AGCD01029347;AGCD01029348;GBBH01001002;GBCB01022960;XM_013515600 XP_013371054 MODEL 8760599 protein-coding Ahsa1 activator of HSP90 ATPase activity 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); Hsp90 protein binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN positive regulation of ATP-dependent activity (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955438 1351475 1359351 + 102016198 AGCD01034980;GBDF01261909;XM_005390201 XP_005390258 MODEL 8790230 protein-coding Adgra3 adhesion G protein-coupled receptor A3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955480 2322783 2408241 + 102027747 AGCD01056611;GBCE01153498;XM_005402467 XP_005402524 MODEL 8938852 protein-coding Eef1akmt3 EEF1A lysine methyltransferase 3 ENCODES a protein that exhibits heat shock protein binding (ortholog); methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955458 5482524 5488040 + 102012741 AGCD01047494;GBDI01385591;XM_005397419 XP_005397476 MODEL 39133974 misc_rna 7SK 7SK RNA 8956128 protein-coding Cbx2 chromobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN development of primary sexual characteristics (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,XY sex reversal 5 (ortholog); disorder of sexual development (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); heterochromatin (ortholog) NW_004955506 3045395 3053003 - 102024485 AGCD01065307;GBCE01130199;GBDK01415620;XM_013506142 XP_013361596 MODEL 8737240 protein-coding Anxa10 annexin A10 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 37780428 37821212 - 102011723 AGCD01002575;GBDK01223538;XM_013513460 XP_013368914 MODEL 39131407 protein-coding CHML CHM like Rab escort protein 8996395 pseudo LOC102009404 sorting nexin-6 pseudogene NW_004955427 21883319 21885923 - 102009404 AGCD01027461 MODEL 8723813 protein-coding Cerkl CERK like autophagy regulator ENCODES a protein that exhibits sphingolipid binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); sphingolipid biosynthetic process (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955403 15620047 15727957 + 102030029 AGCD01002051;AGCD01002052;GBDI01208278;GBDI01208281;XM_013512521 XP_013367975 MODEL 8702408 protein-coding Amer3 APC membrane recruitment protein 3 ASSOCIATED WITH cervical cancer (ortholog); hydrocele (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nuclear body (ortholog) NW_004955459 267754 277422 + 102014424 AGCD01047931;GBDF01117001;XM_005397547;XM_013521051;XR_263003;XR_263004 XP_005397604;XP_013376505 MODEL 8726211 protein-coding Aurka aurora kinase A ENCODES a protein that exhibits histone H3S10 kinase activity (ortholog); molecular function activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); centrosome cycle (ortholog); centrosome localization (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN axon hillock (ortholog); basolateral plasma membrane (ortholog); centrosome (ortholog) NW_004955445 2831073 2853151 + 102011371 AGCD01039369;GBDF01083611;XM_005392275;XM_013518333 XP_005392332;XP_013373787 MODEL 39133849 misc_rna 7SK 7SK RNA 8773011 protein-coding LOC102007172 PRAME family member 23-like NW_004955608 264738 312943 - 102007172 AGCD01077020;AGCD01077021;AGCD01077022;AGCD01077023;AGCD01077024;AGCD01077025;AGCD01077026;AGCD01077027;XM_013510118 XP_013365572 MODEL 8949339 protein-coding LOC102009788 vomeronasal type-1 receptor 4-like NW_004955603 389482 390411 - 102009788 AGCD01076843;XM_005414844 XP_005414901 MODEL 9049307 ncrna LOC102017844 uncharacterized LOC102017844 NW_004955407 37132665 37188696 - 102017844 AGCD01007778;AGCD01007779;GBDF01281780;XR_001231639;XR_001231640;XR_001231642;XR_259617 MODEL 8868704 pseudo LOC102008654 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 pseudogene NW_004955516 2082890 2085194 + 102008654 AGCD01067447 MODEL 8732225 protein-coding Cd40lg CD40 ligand ENCODES a protein that exhibits CD40 receptor binding (ortholog); cytokine activity (ortholog); integrin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); CD40 signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; obesity pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) NW_004955489 8465571 8477714 - 102012438 AGCD01060018;GBDK01262763;XM_005404587 XP_005404644 MODEL 8945258 protein-coding Clcn2 chloride voltage-gated channel 2 ENCODES a protein that exhibits chloride channel regulator activity (ortholog); voltage-gated chloride channel activity (ortholog); voltage-gated monoatomic anion channel activity (ortholog); INVOLVED IN cell differentiation involved in salivary gland development (ortholog); cellular hypotonic response (ortholog); chloride transport (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); bipolar disorder (ortholog); FOUND IN astrocyte end-foot (ortholog); axon initial segment (ortholog); basolateral plasma membrane (ortholog) NW_004955420 23138558 23152462 + 102019067 AGCD01021229;GBDF01160744;XM_005383315;XM_005383317;XM_005383319 XP_005383372;XP_005383374;XP_005383376 MODEL 8732083 ncrna LOC102006819 uncharacterized LOC102006819 NW_004955532 2185792 2187582 + 102006819 AGCD01070222;GBCQ01093416;XR_001232007;XR_001232008;XR_001232009 MODEL 8806570 ncrna LOC102011354 uncharacterized LOC102011354 NW_004955432 10743652 10745702 - 102011354 AGCD01030936;GBDF01250417;XR_261523 MODEL 8892859 protein-coding Cck cholecystokinin ENCODES a protein that exhibits hormone activity (ortholog); neuropeptide hormone activity (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); axonogenesis (ortholog); cholecystokinin signaling pathway (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); alcohol dependence (ortholog); Alcohol Withdrawal Delirium (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); axon initial segment (ortholog) NW_004955420 28438806 28443458 + 102003245 AGCD01021477;AGCD01021478;GBDF01050844;XM_005383549 XP_005383606 MODEL 8802845 protein-coding Abcc10 ATP binding cassette subfamily C member 10 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN leukotriene metabolic process (ortholog); leukotriene transport (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; neviparine pharmacokinetics pathway; vinblastine pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955437 9278977 9297618 + 102008348 AGCD01034524;GBDI01283959;XM_005389768 XP_005389825 MODEL 8765195 protein-coding Igsf11 immunoglobulin superfamily member 11 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); maintenance of protein location (ortholog); positive regulation of long-term synaptic potentiation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell-cell junction (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955427 18698774 18716669 - 102021994 AGCD01027348;GBDF01007359;GBDJ01318281;XM_013515231 XP_013370685 MODEL 39131911 rrna 5S_rRNA 5S ribosomal RNA 10140023 ncrna LOC106149978 uncharacterized LOC106149978 NW_004955458 2108409 2134724 + 106149978 AGCD01047214;AGCD01047215;GBDI01150316;XR_001236483 MODEL 8908823 protein-coding LOC102004683 uncharacterized LOC102004683 NW_004955464 12780991 12785037 + 102004683 AGCD01050228;GBDF01008922;XM_013521579 XP_013377033 MODEL 8942894 protein-coding Ferry3 FERRY endosomal RAB5 effector complex subunit 3 INVOLVED IN regulation of mast cell degranulation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 66 (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); protein-containing complex (ortholog) NW_004955413 2298514 2335308 - 102003328 AGCD01013544;GBDK01398152;XM_005378731;XM_013511553 XP_005378788;XP_013367007 MODEL 9056296 protein-coding Lmnb2 lamin B2 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of cytoskeleton (ortholog); ASSOCIATED WITH autosomal dominant primary microcephaly 27 (ortholog); cervical cancer (ortholog); microcephaly (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear lamina (ortholog) NW_004955495 4826653 4851984 - 102009293 AGCD01061953;AGCD01061954;AGCD01061955;AGCD01061956;AGCD01061957;AGCD01061958;GBCB01086244;GBDI01188605;XM_013505227 XP_013360681 MODEL 8989088 protein-coding Cdk7 cyclin dependent kinase 7 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN positive regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog) NW_004955446 54401 87884 + 102008161 AGCD01039922;AGCD01039923;AGCD01039924;AGCD01039925;AGCD01039926;GBDF01121523;XM_005392592;XM_013518419 XP_005392649;XP_013373873 MODEL 8995004 pseudo LOC102012958 retinol dehydrogenase 14 pseudogene NW_004955476 11736864 11740171 - 102012958 AGCD01055474 MODEL 8920865 ncrna LOC102010579 uncharacterized LOC102010579 NW_004955416 6320380 6345046 + 102010579 AGCD01016940;AGCD01016941;XR_260358 MODEL 8840625 protein-coding Grm5 glutamate metabotropic receptor 5 ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); G protein-coupled receptor activity (ortholog); glutamate receptor activity (ortholog); INVOLVED IN associative learning (ortholog); cellular response to amyloid-beta (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcoholic neuropathy (ortholog); FOUND IN astrocyte projection (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955414 4424245 4919399 + 102007652 AGCD01014866;AGCD01014867;AGCD01014868;AGCD01014869;AGCD01014870;AGCD01014871;AGCD01014872;AGCD01014873;AGCD01014874;AGCD01014875;AGCD01014876;AGCD01014877;AGCD01014878;GBDF01115636;XM_005380433 XP_005380490 MODEL 8753840 protein-coding Cope coat protein complex I subunit epsilon INVOLVED IN protein localization to axon (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN COPI-coated vesicle (ortholog); Golgi apparatus (ortholog) NW_004955524 2767996 2779671 + 102003273 AGCD01068834;GBCE01000519;XM_005409597;XM_005409598 XP_005409654;XP_005409655 MODEL 8852104 protein-coding Hvcn1 hydrogen voltage gated channel 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); voltage-gated monoatomic cation channel activity (ortholog); INVOLVED IN cellular response to pH (ortholog); cellular response to zinc ion (ortholog); positive regulation of superoxide anion generation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog); phagocytic vesicle membrane (ortholog) NW_004955482 7529009 7563273 - 102025007 AGCD01057474;AGCD01057475;GBBH01034214;XM_005403162;XM_005403163;XM_013503672;XM_013503673;XM_013503674 XP_005403219;XP_005403220;XP_013359126;XP_013359127;XP_013359128 MODEL 8949353 ncrna LOC102011798 uncharacterized LOC102011798 NW_004955521 1606251 1622200 - 102011798 AGCD01068190;GBDF01280812;XR_001231893;XR_001231894 MODEL 39131777 rrna 5S_rRNA 5S ribosomal RNA 8736631 protein-coding Ino80e INO80 complex subunit E INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Ino80 complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955493 6953945 6963910 - 102026988 AGCD01061152;GBDF01002093;XM_005405204;XM_013504785;XM_013504786;XM_013504787;XM_013504788 XP_005405261;XP_013360239;XP_013360240;XP_013360241;XP_013360242 MODEL 8909439 pseudo LOC102003949 uncharacterized protein C9orf85 homolog pseudogene NW_004955409 16860918 16865775 + 102003949 AGCD01009746 MODEL 8792751 protein-coding C1ql2 complement C1q like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); postsynaptic density assembly (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955459 10569064 10571064 + 102024767 AGCD01048192;GBDK01160507;XM_013521053 XP_013376507 MODEL 8869054 protein-coding LOC102021907 putative uncharacterized protein C3orf49 NW_004955517 2046893 2064789 - 102021907 AGCD01067615;GBBH01155474;XM_013506936;XM_013506937 XP_013362390;XP_013362391 MODEL 8711469 protein-coding Adgrb1 adhesion G protein-coupled receptor B1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); lipopolysaccharide binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); defense response to Gram-negative bacterium (ortholog); engulfment of apoptotic cell (ortholog); ASSOCIATED WITH astigmatism (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN dendrite (ortholog); extracellular region (ortholog); focal adhesion (ortholog) NW_004955454 1250261 1313547 + 102017627 AGCD01044967;AGCD01044968;GBBH01028741;XM_013520249 XP_013375703 MODEL 8947158 protein-coding Eef1b2 eukaryotic translation elongation factor 1 beta 2 INVOLVED IN response to ethanol (ortholog); PARTICIPATES IN translation elongation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) NW_004955457 8835121 8837816 - 102017633 AGCD01046919;GBDF01003870;XM_005397000 XP_005397057 MODEL 8844557 protein-coding Epb41l4b erythrocyte membrane protein band 4.1 like 4B INVOLVED IN actomyosin structure organization (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog) NW_004955419 17686096 17821884 + 102003658 AGCD01020161;AGCD01020162;AGCD01020163;AGCD01020164;GBCE01117906;GBCE01117907;XM_013513219;XM_013513220 XP_013368673;XP_013368674 MODEL 8801966 protein-coding Ghitm growth hormone inducible transmembrane protein ENCODES a protein that exhibits calcium:proton antiporter activity (ortholog); potassium:proton antiporter activity (ortholog); INVOLVED IN calcium export from the mitochondrion (ortholog); calcium ion transport (ortholog); inner mitochondrial membrane organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955510 3674303 3688747 + 102003568 AGCD01066246;AGCD01066247;GBDF01005517;GBDF01197615;XM_005407879 XP_005407936 MODEL 8853190 protein-coding Cbx3 chromobox 3 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); histone H1K26me1 reader activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); DNA damage response (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromatin (ortholog); chromatin lock complex (ortholog); chromocenter (ortholog) NW_004955410 28042627 28052616 + 102028168 AGCD01011228;AGCD01011229;GBDF01046149;XM_005377442;XM_005377443 XP_005377499;XP_005377500 MODEL 8872734 protein-coding Kctd21 potassium channel tetramerization domain containing 21 ENCODES a protein that exhibits cullin family protein binding (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); ubiquitin-dependent protein catabolic process (ortholog) NW_004955414 13779193 13798349 + 102005027 AGCD01015119;GBDF01181327;XM_005379818;XM_005379819;XM_013512063 XP_005379875;XP_005379876;XP_013367517 MODEL 9054956 protein-coding Camk2b calcium/calmodulin dependent protein kinase II beta ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); identical protein binding (ortholog); phospholipase binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); calcium ion transport (ortholog); cell projection morphogenesis (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; p38 MAPK signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH anemia (ortholog); asthma (ortholog); astigmatism (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955456 7711583 7760506 + 102008700 AGCD01046430;AGCD01046431;GBCB01000457;XM_013520515 XP_013375969 MODEL 8826181 protein-coding Acp2 acid phosphatase 2, lysosomal ENCODES a protein that exhibits acid phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN autophagic cell death (ortholog); lysosome organization (ortholog); regulation of viral entry into host cell (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Acid Phosphatase Deficiency (ortholog); Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN lysosomal lumen (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955422 954108 961522 + 102023709 AGCD01022442;GBDF01127870;XM_005383978 XP_005384035 MODEL 9027719 pseudo LOC102008295 prefoldin subunit 4 pseudogene NW_004955410 29037966 29038370 - 102008295 AGCD01011273 MODEL 8805946 protein-coding Aurkaip1 aurora kinase A interacting protein 1 INVOLVED IN positive regulation of proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955486 9437511 9438945 + 102022196 AGCD01059185;GBBH01091603;XM_005404225;XM_005404226;XM_005404227;XM_005404228 XP_005404282;XP_005404283;XP_005404284;XP_005404285 MODEL 39133850 misc_rna 7SK 7SK RNA 9066009 protein-coding Kank2 KN motif and ankyrin repeat domains 2 INVOLVED IN kidney epithelium development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955495 2168992 2173581 - 102017468 AGCD01061749;AGCD01061750;GBDF01040871;XM_005405644;XM_013505179 XP_005405701;XP_013360633 MODEL 39134249 misc_rna 7SK 7SK RNA 8976014 pseudo LOC102005715 60S ribosomal protein L7 pseudogene NW_004955487 5975491 5976261 + 102005715 AGCD01059350 MODEL 8804392 pseudo LOC102017846 heat shock cognate 71 kDa protein-like NW_004955407 35524223 35534029 - 102017846 AGCD01007744;AGCD01007745 MODEL 8864638 pseudo LOC102004312 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 pseudogene NW_004955434 9625813 9626382 - 102004312 AGCD01032306 MODEL 8829580 trna Trnah-gug transfer RNA histidine(anticodon GUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955409;NW_004955434;NW_004955409;NW_004955409 58646;8201309;17523204;8203034;8201874 58717;8201380;17523275;8203105;8201945 -;-;-;+;+ 101978821 AGCD01009385;AGCD01032537;AGCD01074502 MODEL 9016378 protein-coding Elapor2 endosome-lysosome associated apoptosis and autophagy regulator family member 2 INVOLVED IN positive regulation of BMP signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955410 47021 98055 + 102027498 AGCD01010580;AGCD01010581;AGCD01010582;GBDK01130372;XM_005377188 XP_005377245 MODEL 9037605 protein-coding LOC102011357 death-inducer obliterator 1-like NW_004955528 1209085 1240649 + 102011357 AGCD01069553;AGCD01069554;AGCD01069555;AGCD01069556;GBDF01089866;XM_013507433 XP_013362887 MODEL 39133975 misc_rna 7SK 7SK RNA 8895475 protein-coding Dlst dihydrolipoamide S-succinyltransferase ENCODES a protein that exhibits acyltransferase activity (ortholog); dihydrolipoyllysine-residue glutaryltransferase activity (ortholog); dihydrolipoyllysine-residue succinyltransferase activity (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); Hereditary Paraganglioma-Pheochromocytoma Syndromes (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955523 660413 680878 - 102011235 AGCD01068474;AGCD01068475;GBBH01064906;GBDJ01128538;XM_013507173 XP_013362627 MODEL 8775855 protein-coding Anxa11 annexin A11 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cytokinetic process (ortholog); phagocytosis (ortholog); response to calcium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 23 (ortholog); FOUND IN azurophil granule (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 13119782 13161196 - 102016744 AGCD01034647;GBCC01008901;GBDI01004969;XM_005389885 XP_005389942 MODEL 8738054 protein-coding Cngb1 cyclic nucleotide gated channel subunit beta 1 ENCODES a protein that exhibits cAMP binding (ortholog); cGMP binding (ortholog); cyclic nucleotide-activated monoatomic ion channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN altered visual phototransduction pathway; calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); cone-rod dystrophy (ortholog); FOUND IN intracellular cyclic nucleotide activated cation channel complex (ortholog); membrane (ortholog); non-motile cilium membrane (ortholog) NW_004955433 15467042 15556471 - 102009645 AGCD01031753;AGCD01031754;AGCD01031755;AGCD01031756;AGCD01031757;AGCD01031758;GBBH01083078;XM_013516097 XP_013371551 MODEL 10392019 protein-coding Chml CHM like Rab escort protein ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN protein geranylgeranylation (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); Rab-protein geranylgeranyltransferase complex (ortholog) NW_004955406 10455367 10461934 + 106146235 AGCD01005861;GBDF01223071;XM_013520518 XP_013375972 MODEL 8873474 protein-coding Fes FES proto-oncogene, tyrosine kinase ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); microtubule binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); cellular response to vitamin D (ortholog); centrosome cycle (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); coronary artery disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955416 14948121 14959035 + 102016590 AGCD01017292;GBDJ01008856;XM_005381509;XM_005381510;XM_013512503 XP_005381566;XP_005381567;XP_013367957 MODEL 8852638 protein-coding Ets1 ETS proto-oncogene 1, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); cell motility (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN altered p53 signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); celiac disease (ortholog); coarctation of the aorta (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 29433730 29602389 - 102010567 AGCD01013279;AGCD01013280;AGCD01013281;AGCD01013282;AGCD01013283;GBCC01027243;XM_005378524;XM_005378525;XM_005378526;XM_005378527;XM_005378529;XM_013511111;XM_013511112;XM_013511113 XP_005378581;XP_005378582;XP_005378583;XP_005378584;XP_005378586;XP_013366565;XP_013366566;XP_013366567 MODEL 8736592 protein-coding Arf5 ARF GTPase 5 INVOLVED IN lysosomal membrane organization (ortholog); positive regulation of TOR signaling (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); lysosomal membrane (ortholog) NW_004955479 8644658 8647697 + 102022285 AGCD01056451;GBDJ01003261;XM_005402360 XP_005402417 MODEL 8962566 protein-coding LOC102007173 translation initiation factor IF-2-like NW_004955451 5638379 5640035 + 102007173 AGCD01043171;GBDF01005683;XM_013519255 XP_013374709 MODEL 8872103 ncrna LOC102009790 uncharacterized LOC102009790 NW_004955403 20132939 20135472 - 102009790 AGCD01002154;GBDJ01243887;XR_259189 MODEL 39131778 rrna 5S_rRNA 5S ribosomal RNA 8760078 protein-coding Aurkb aurora kinase B ENCODES a protein that exhibits histone H1-4S27 kinase activity (ortholog); histone H3S28 kinase activity (ortholog); kinase binding (ortholog); INVOLVED IN cell cycle G2/M phase transition (ortholog); cellular response to UV (ortholog); cleavage furrow formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome (ortholog) NW_004955467 8715387 8720889 + 102022269 AGCD01051466;GBDF01045906;XM_005399426;XM_005399427;XM_013522019;XM_013522020;XM_013522021 XP_005399483;XP_005399484;XP_013377473;XP_013377474;XP_013377475 MODEL 8913323 protein-coding Cd44 CD44 molecule (IN blood group) ENCODES a protein that exhibits cargo receptor activity (ortholog); cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN blood vessel maturation (ortholog); branching involved in prostate gland morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955422 11106061 11189951 - 102010173 AGCD01022750;AGCD01022751;EU366974;GBCQ01036797;XM_005384129;XM_005384131;XM_005384132;XM_005384133;XM_005384134;XM_005384135;XM_013514145;XM_013514146;XM_013514147;XM_013514148;XM_013514149;XM_013514150 ACA62714;XP_005384186;XP_005384188;XP_005384189;XP_005384190;XP_005384191;XP_005384192;XP_013369599;XP_013369600;XP_013369601;XP_013369602;XP_013369603;XP_013369604 MODEL 9037517 protein-coding LOC102009405 suppressor protein SRP40-like NW_004955428 50432 51439 - 102009405 AGCD01027559;XM_005386839 XP_005386896 MODEL 8980221 protein-coding Igsf21 immunoglobin superfamily member 21 INVOLVED IN synapse maturation (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); inhibitory synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955527 773340 994679 - 102020371 AGCD01069387;GBCQ01162091;GBDF01111574;XM_005409806 XP_005409863 MODEL 39131912 rrna 5S_rRNA 5S ribosomal RNA 8738494 protein-coding Adgrb2 adhesion G protein-coupled receptor B2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); G protein-coupled receptor signaling pathway (ortholog); peripheral nervous system development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955452 10131371 10167597 - 102011834 AGCD01044269;GBDI01055095;XM_005395033;XM_005395035;XM_005395036;XM_013519736;XM_013519737;XM_013519738;XM_013519739;XM_013519740 XP_005395090;XP_005395092;XP_005395093;XP_013375190;XP_013375191;XP_013375192;XP_013375193;XP_013375194 MODEL 8939439 protein-coding LOC102008301 zinc finger protein 527 NW_004955468 1868700 1887881 + 102008301 AGCD01051785;GBDF01117493;XM_005399918;XM_013522318 XP_005399975;XP_013377772 MODEL 8814197 protein-coding Cers1 ceramide synthase 1 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); sphingosine N-acyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to dithiothreitol (ortholog); cellular response to mycotoxin (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); Insulin Resistance (ortholog); obesity (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955524 2788672 2798068 + 102006945 AGCD01068835;AGCD01068836;AGCD01068837;GBCE01034095;GBDF01122555;XM_013507225 XP_013362679 MODEL 8998624 protein-coding Eef1d eukaryotic translation elongation factor 1 delta ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to ionizing radiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); fibrillar center (ortholog) NW_004955454 2284892 2299169 - 102005558 AGCD01045015;GBCQ01000760;XM_013520018;XM_013520019;XM_013520020;XM_013520021;XM_013520022;XM_013520023;XM_013520024;XM_013520025 XP_013375472;XP_013375473;XP_013375474;XP_013375475;XP_013375476;XP_013375477;XP_013375478;XP_013375479 MODEL 8930557 protein-coding Amfr autocrine motility factor receptor ENCODES a protein that exhibits BAT3 complex binding (ortholog); identical protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); learning or memory (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amenorrhea (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ATPase complex (ortholog); dendrite (ortholog); Derlin-1 retrotranslocation complex (ortholog) NW_004955433 14172871 14205484 - 102011692 AGCD01031707;AGCD01031708;GBCC01017957;GBCE01028798;XM_013516124 XP_013371578 MODEL 8791757 ncrna LOC102008655 uncharacterized LOC102008655 NW_004955434 11901814 11906490 - 102008655 AGCD01032382;GBDF01223017;XR_001234777 MODEL 8808717 protein-coding Cdk8 cyclin dependent kinase 8 ENCODES a protein that exhibits protein kinase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of triglyceride metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN CKM complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); mediator complex (ortholog) NW_004955497 5781237 5908072 + 102027759 AGCD01062615;AGCD01062616;AGCD01062617;GBCE01085457;GBDI01224913;XM_005406344 XP_005406401 MODEL 9005988 protein-coding Lmntd1 lamin tail domain containing 1 INVOLVED IN cell population proliferation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Lung Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog); nucleus (ortholog) NW_004955413 20508574 20771188 - 102030620 AGCD01014217;AGCD01014218;AGCD01014219;AGCD01014220;AGCD01014221;AGCD01014222;AGCD01014223;AGCD01014224;AGCD01014225;AGCD01014226;AGCD01014227;AGCD01014228;AGCD01014229;AGCD01014230;GBDF01210105;XM_005379102;XM_005379104;XM_005379105;XM_013511519;XM_013511520;XM_013511521 XP_005379159;XP_005379161;XP_005379162;XP_013366973;XP_013366974;XP_013366975 MODEL 8920769 protein-coding Hyal1 hyaluronidase 1 ENCODES a protein that exhibits chondroitin hydrolase activity (ortholog); hyalurononglucosaminidase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); Kidney Reperfusion Injury (ortholog); mucopolysaccharidosis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular region (ortholog); hyaluranon cable (ortholog) NW_004955532 2113016 2116093 - 102029441 AGCD01070218;GBDI01261298;XM_005410257 XP_005410314 MODEL 8859322 protein-coding LOC102011799 uncharacterized LOC102011799 NW_004955524 3971442 3983883 + 102011799 AGCD01068941;GBDK01315273;XM_005409534;XM_013507300;XM_013507301 XP_005409591;XP_013362754;XP_013362755 MODEL 9021527 protein-coding Cbx4 chromobox 4 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); histone H3K27me3 reader activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955506 2998241 3002788 + 102024145 AGCD01065306;GBCE01104488;GBDK01359474;XM_013506139 XP_013361593 MODEL 39134250 misc_rna 7SK 7SK RNA 8982294 pseudo LOC102006824 sorting nexin-2 pseudogene NW_004955439 2480520 2482408 - 102006824 AGCD01035651 MODEL 8830439 protein-coding Clcn3 Cl-/H+ antiporter 3 ENCODES a protein that exhibits antiporter activity (ortholog); chloride channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); cytoplasmic vesicle (ortholog) NW_004955403 36625871 36710201 - 102002982 AGCD01002544;AGCD01002545;AGCD01002546;GBCC01015450;XM_005373554;XM_005373555;XM_005373556;XM_005373557;XM_005373558;XM_005373559;XM_005373560;XM_005373561;XM_005373562 XP_005373611;XP_005373612;XP_005373613;XP_005373614;XP_005373615;XP_005373616;XP_005373617;XP_005373618;XP_005373619 MODEL 8775529 pseudo LOC102003953 60S ribosomal protein L12 pseudogene NW_004955463 738958 739526 - 102003953 AGCD01049497 MODEL 8894372 protein-coding LOC102004314 vomeronasal type-2 receptor 116-like NW_004955524 1994507 2020685 + 102004314 AGCD01068790;AGCD01068791;AGCD01068792;XM_013507192 XP_013362646 MODEL 8702994 protein-coding Abcc12 ATP binding cassette subfamily C member 12 ASSOCIATED WITH bone marrow disease (ortholog); Breast Cancer, Familial (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955474 7166148 7238013 + 102008402 AGCD01054515;AGCD01054516;GBDF01120114;XM_005401403;XM_005401404;XM_005401405;XM_005401406 XP_005401460;XP_005401461;XP_005401462;XP_005401463 MODEL 9008066 ncrna LOC102021908 uncharacterized LOC102021908 NW_004955433 9978528 10091601 - 102021908 AGCD01031621;AGCD01031622;AGCD01031623;AGCD01031624;GBDF01128236;XR_001234701;XR_261583 MODEL 8963835 protein-coding C1ql3 complement C1q like 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); postsynaptic density assembly (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955429 11287486 11296716 + 102030103 AGCD01028686;GBDJ01404596;XM_005386970 XP_005387027 MODEL 10118803 protein-coding LOC106149979 translation initiation factor IF-2-like NW_004955459 2332304 2333294 + 106149979 AGCD01047988;GBCQ01090380;XM_013521050 XP_013376504 MODEL 8985665 protein-coding Elavl1 ELAV like RNA binding protein 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); lncRNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cell population proliferation (ortholog); lncRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); degenerative disc disease (ortholog); endometriosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytoplasmic vesicle (ortholog) NW_004955563 1283424 1315283 + 102017516 AGCD01074139;AGCD01074140;GBDF01002281;GBDF01002282;XM_005413137 XP_005413194 MODEL 8814864 pseudo LOC102004685 death effector domain-containing protein pseudogene NW_004955467 541544 543081 - 102004685 AGCD01051226 MODEL 8950182 protein-coding Epb41l5 erythrocyte membrane protein band 4.1 like 5 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); apical constriction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955459 9641926 9783718 - 102017547 AGCD01048164;AGCD01048165;AGCD01048166;AGCD01048167;AGCD01048168;AGCD01048169;AGCD01048170;AGCD01048171;GBCE01115046;XM_005397654;XM_005397658;XM_005397659 XP_005397711;XP_005397715;XP_005397716 MODEL 8951388 ncrna LOC102010581 uncharacterized LOC102010581 NW_004955478 6558216 6561171 + 102010581 AGCD01055900;GBDF01140094;XR_001230864;XR_263703 MODEL 39131913 rrna 5S_rRNA 5S ribosomal RNA 8867979 protein-coding Kctd3 potassium channel tetramerization domain containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 2500619 2539123 - 102012829 AGCD01005650;AGCD01005651;GBCB01039082;XM_005375446 XP_005375503 MODEL 8861506 protein-coding Cngb3 cyclic nucleotide gated channel subunit beta 3 ENCODES a protein that exhibits cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); intracellularly cGMP-activated cation channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); visual perception (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 1 (ortholog); achromatopsia 3 (ortholog); FOUND IN intracellular cyclic nucleotide activated cation channel complex (ortholog); photoreceptor outer segment (ortholog); plasma membrane (ortholog) NW_004955417 4164328 4288516 - 102011118 AGCD01017939;AGCD01017940;AGCD01017941;AGCD01017942;AGCD01017943;XM_005381981 XP_005382038 MODEL 8984561 protein-coding Grm6 glutamate metabotropic receptor 6 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); glutamate receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1B (ortholog); congenital stationary night blindness 1C (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955408 1421132 1432010 + 102009468 AGCD01007959;GBCB01048356;XM_013507979 XP_013363433 MODEL 8798081 protein-coding Fetub fetuin B ENCODES a protein that exhibits metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of endopeptidase activity (ortholog); single fertilization (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog) NW_004955420 21041419 21054043 - 102003141 AGCD01021120;AGCD01021121;GBBH01166494;XM_005383270;XM_005383271;XM_005383272;XM_005383273 XP_005383327;XP_005383328;XP_005383329;XP_005383330 MODEL 8993315 protein-coding LOC102007174 cocaine esterase-like NW_004955767 9802 20242 - 102007174 AGCD01078309;AGCD01078310;GBDJ01038301;XM_005415102 XP_005415159 MODEL 8932229 ncrna LOC102005716 uncharacterized LOC102005716 NW_004955421 23197095 23198981 + 102005716 AGCD01022174;GBCB01036865;XR_260820 MODEL 9031868 pseudo LOC102017847 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955458 3142433 3143246 + 102017847 AGCD01047274 MODEL 9036604 trna Trnai-aau transfer RNA isoleucine (anticodon AAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978794 AGCD01050493;AGCD01050590;AGCD01050591;AGCD01050597;AGCD01051466;AGCD01051471;AGCD01057606;AGCD01077147 MODEL 39133976 misc_rna 7SK 7SK RNA 9015689 ncrna LOC102011358 uncharacterized LOC102011358 NW_004955436 18358012 18378034 - 102011358 AGCD01033960;GBDF01225067;XR_001234940 MODEL 8743231 protein-coding Ahsa2 Putative activator of 90 kDa heat shock protein ATPase homolog 2 NW_004955424 22688824 22700820 - 102022944 AGCD01024979;GBCE01054756;GBDF01082227;XM_005385742;XM_013514605;XM_013514606;XM_013514607 XP_005385799;XP_013370059;XP_013370060;XP_013370061 MODEL 8699801 protein-coding Dlx1 distal-less homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to BMP stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955449 2920705 2924667 - 102015676 AGCD01041839;GBCC01012740;XM_005393218 XP_005393275 MODEL 8980382 protein-coding Igsf22 immunoglobulin superfamily member 22 NW_004955414 33364637 33378363 - 102023687 AGCD01015805;GBDF01144543;XM_013511745 XP_013367199 MODEL 8915499 pseudo LOC102012960 E3 ubiquitin-protein ligase Mdm2 pseudogene NW_004955416 14407621 14422095 - 102012960 AGCD01017262;AGCD01017263;AGCD01017264 MODEL 8960374 protein-coding Anxa13 annexin A13 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of Golgi to plasma membrane protein transport (ortholog); positive regulation of Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955540 2482499 2561569 - 102005508 AGCD01071321;GBDF01252876;XM_005410935;XM_005410936;XM_005410937;XM_013507926 XP_005410992;XP_005410993;XP_005410994;XP_013363380 MODEL 8932136 protein-coding Camk2d calcium/calmodulin dependent protein kinase II delta ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cardiac muscle cell contraction (ortholog); cardiac muscle contraction (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Cafe-au-Lait Spots (ortholog); FOUND IN axon initial segment (ortholog); calcium- and calmodulin-dependent protein kinase complex (ortholog); cochlear hair cell ribbon synapse (ortholog) NW_004955428 25583501 25880395 + 102003472 AGCD01028289;AGCD01028290;GBCB01042196;XM_005386817;XM_005386818;XM_005386824;XM_005386825;XM_005386831;XM_005386832;XM_005386834;XM_005386836;XM_013515306;XM_013515307;XM_013515308 XP_005386874;XP_005386875;XP_005386881;XP_005386882;XP_005386888;XP_005386889;XP_005386891;XP_005386893;XP_013370760;XP_013370761;XP_013370762 MODEL 9066516 protein-coding Chmp1a charged multivesicular body protein 1A ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cell division (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); condensed nuclear chromosome (ortholog) NW_004955541 3216972 3223636 - 102013007 AGCD01071440;GBDI01072457;XM_005411048;XM_005411049 XP_005411105;XP_005411106 MODEL 8977075 protein-coding Ets2 ETS proto-oncogene 2, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN ectodermal cell fate commitment (ortholog); mesoderm development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955407 37747152 37764170 + 102020309 AGCD01007785;GBDF01304491;XM_005375762 XP_005375819 MODEL 9031766 protein-coding LOC102009791 uncharacterized LOC102009791 NW_004955648 46741 47626 - 102009791 AGCD01077769;GBDF01075664;XM_005415051 XP_005415108 MODEL 8836892 protein-coding Kank3 KN motif and ankyrin repeat domains 3 ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955563 1056084 1073391 + 102013980 AGCD01074108;AGCD01074109;AGCD01074110;AGCD01074111;GBBH01114838;GBDK01022992;XM_013509152 XP_013364606 MODEL 8830394 protein-coding Inpp1 inositol polyphosphate-1-phosphatase PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955403 8713565 8742725 - 102030142 AGCD01001887;AGCD01001888;AGCD01001889;GBDK01142523;XM_005373303;XM_005373304;XM_005373305;XM_005373306;XM_013512293;XM_013512299;XM_013512307 XP_005373360;XP_005373361;XP_005373362;XP_005373363;XP_013367747;XP_013367753;XP_013367761 MODEL 8731061 protein-coding Cckar cholecystokinin A receptor ENCODES a protein that exhibits cholecystokinin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); axonogenesis (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); cholelithiasis (ortholog); Gallbladder Neoplasms (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955443 18738029 18748684 + 102017071 AGCD01038609;GBDI01035734;XM_005392028 XP_005392085 MODEL 8749819 protein-coding Grm7 glutamate metabotropic receptor 7 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); adenylate cyclase inhibitor activity (ortholog); calcium channel regulator activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult behavior (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN asymmetric synapse (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955421 5723662 6542557 - 102016388 AGCD01021724;AGCD01021725;AGCD01021726;AGCD01021727;AGCD01021728;AGCD01021729;AGCD01021730;AGCD01021731;AGCD01021732;AGCD01021733;AGCD01021734;AGCD01021735;AGCD01021736;AGCD01021737;GBDJ01375281;XM_005383736;XM_005383738;XR_001233876 XP_005383793;XP_005383795 MODEL 8787836 protein-coding LOC102011800 arrestin domain-containing protein 2 NW_004955524 3316609 3321314 - 102011800 AGCD01068880;AGCD01068881;GBCB01002759;GBDI01131111;XM_013507270 XP_013362724 MODEL 39131779 rrna 5S_rRNA 5S ribosomal RNA 8733378 protein-coding Cd46 CD46 molecule ENCODES a protein that exhibits cadherin binding (ortholog); endopeptidase activity (ortholog); protein sequestering activity (ortholog); INVOLVED IN negative regulation of complement activation, alternative pathway (ortholog); negative regulation of complement activation, classical pathway (ortholog); positive regulation of interleukin-10 production (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); acute necrotizing pancreatitis (ortholog); FOUND IN acrosomal vesicle (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955406 43002817 43034555 + 102004780 AGCD01006723;GBCB01061702;XM_005375434;XM_005375435;XM_005375436;XM_005375437;XM_005375438;XM_005375439;XM_005375440;XM_005375441;XM_013502946;XR_001230795;XR_259539 XP_005375491;XP_005375492;XP_005375493;XP_005375494;XP_005375495;XP_005375496;XP_005375497;XP_005375498;XP_013358400 MODEL 8732173 protein-coding Auts2 activator of transcription and developmental regulator AUTS2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axon extension (ortholog); dendrite extension (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); atrial heart septal defect (ortholog); autism spectrum disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); growth cone (ortholog); nucleoplasm (ortholog) NW_004955456 10294525 11417761 - 102011279 AGCD01046521;AGCD01046522;AGCD01046523;AGCD01046524;AGCD01046525;AGCD01046526;AGCD01046527;AGCD01046528;AGCD01046529;AGCD01046530;AGCD01046531;AGCD01046532;AGCD01046533;AGCD01046534;AGCD01046535;AGCD01046536;AGCD01046537;AGCD01046538;AGCD01046539;AGCD01046540;AGCD01046541;AGCD01046542;AGCD01046543;AGCD01046544;AGCD01046545;AGCD01046546;AGCD01046547;AGCD01046548;AGCD01046549;AGCD01046550;GBCB01021501;GBCQ01039445;XM_013520551;XM_013520552;XM_013520553;XM_013520554;XM_013520555;XM_013520557 XP_013376005;XP_013376006;XP_013376007;XP_013376008;XP_013376009;XP_013376011 MODEL 8874749 protein-coding Ghr growth hormone receptor ENCODES a protein that exhibits growth factor binding (ortholog); growth hormone receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN growth hormone signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); bone structure disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); growth hormone receptor complex (ortholog) NW_004955426 26553509 26873619 + 102013852 AF332036;AF520660;AGCD01026773;AGCD01026774;AGCD01026775;AGCD01026776;AGCD01026777;AGCD01026778;AGCD01026779;AGCD01026780;AGCD01026781;AGCD01026782;AGCD01026783;AGCD01026784;AGCD01026785;AGCD01026786;AY701337;GBBH01051006;GBCE01118144;XM_013514982;XM_013514983 AAK71912;AAO73203;AAU06306;XP_013370436;XP_013370437 MODEL 8752181 pseudo LOC102004316 myb/SANT-like DNA-binding domain-containing protein 3 pseudogene NW_004955530 335889 336767 + 102004316 AGCD01069846 MODEL 10208788 ncrna LOC106149980 uncharacterized LOC106149980 NW_004955459 1248910 1282515 - 106149980 AGCD01047965;AGCD01047966;GBDF01224976;XR_001236484 MODEL 9010718 protein-coding C1qtnf1 C1q and TNF related 1 ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of platelet activation (ortholog); negative regulation of platelet aggregation (ortholog); positive regulation of aldosterone secretion (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955506 3680352 3700729 - 102026658 AGCD01065318;AGCD01065319;GBBH01050432;XM_005407346;XM_005407347;XM_013506098 XP_005407403;XP_005407404;XP_013361552 MODEL 8868640 protein-coding Acp3 acid phosphatase 3 ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); acid phosphatase activity (ortholog); choline binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); dephosphorylation (ortholog); nucleotide metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acid phosphatase complex (ortholog); apical part of cell (ortholog); extracellular region (ortholog) NW_004955501 6168083 6218934 - 102007574 AGCD01064181;AGCD01064182;AGCD01064183;GBBH01101532;XM_005406838;XM_013505810 XP_005406895;XP_013361264 MODEL 8939628 protein-coding Cers2 ceramide synthase 2 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); gene expression (ortholog); glycosphingolipid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955588 338381 342139 - 102016540 AGCD01076105;GBCE01030942;GBDK01002537;XM_013509916 XP_013365370 MODEL 8717760 protein-coding LOC102008303 zinc finger protein 419-like NW_004955468 4251476 4270784 + 102008303 AGCD01051903;AGCD01051904;GBCE01148167;XM_005400012;XM_013522366 XP_005400069;XP_013377820 MODEL 8743771 protein-coding Adgrb3 adhesion G protein-coupled receptor B3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); motor learning (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Dwarfism (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955488 3803859 4509043 + 102023707 AGCD01059585;AGCD01059586;AGCD01059587;AGCD01059588;AGCD01059589;AGCD01059590;AGCD01059591;AGCD01059592;AGCD01059593;AGCD01059594;AGCD01059595;AGCD01059596;AGCD01059597;GBCE01177377;XM_005404463;XM_005404464;XM_005404465 XP_005404520;XP_005404521;XP_005404522 MODEL 8837581 protein-coding Amh anti-Mullerian hormone ENCODES a protein that exhibits signaling receptor binding (ortholog); transforming growth factor beta receptor binding (ortholog); type II transforming growth factor beta receptor binding (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); Leydig cell differentiation (ortholog); Mullerian duct regression (ortholog); ASSOCIATED WITH breast cancer (ortholog); disorder of sexual development (ortholog); Female Urogenital Diseases (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); serine/threonine protein kinase complex (ortholog) NW_004955495 5893375 5896152 - 102016613 AGCD01062043;GBDJ01028983;XM_005405913 XP_005405970 MODEL 39133851 misc_rna 7SK 7SK RNA 8764683 protein-coding Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); progeria (ortholog); stomach cancer (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955465 5878055 5895232 + 102025223 AGCD01050433;GBDF01126485;XM_005398844;XM_005398845;XR_001236757;XR_263242 XP_005398901;XP_005398902 MODEL 8743547 protein-coding LOC102008662 uncharacterized LOC102008662 NW_004955538 2203100 2223177 - 102008662 AGCD01071109;GBDK01307063;XM_013507815;XM_013507816;XM_013507817 XP_013363269;XP_013363270;XP_013363271 MODEL 8760901 protein-coding Arf6 ARF GTPase 6 ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); endocytic recycling (ortholog); PARTICIPATES IN E-cadherin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Failure to Thrive (ortholog); intellectual disability (ortholog); sarcoma (ortholog); FOUND IN cell cortex (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955409 12814814 12818142 - 102026724 AGCD01009567;GBCE01001245;GBDF01002353;XM_005376832 XP_005376889 MODEL 9042778 protein-coding Cdk9 cyclin dependent kinase 9 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); host-mediated activation of viral transcription (ortholog); negative regulation of protein localization to chromatin (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); nucleus (ortholog); P-TEFb complex (ortholog) NW_004955419 874959 883160 - 102026114 AGCD01019620;GBCB01061025;GBCE01077384;XM_005382409 XP_005382466 MODEL 8855033 protein-coding Hyal2 hyaluronidase 2 ENCODES a protein that exhibits enzyme binding (ortholog); hyaluronic acid binding (ortholog); hyaluronoglucuronidase activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH CLEFT LIP AND PALATE-CRANIOFACIAL DYSMORPHISM-CONGENITAL HEART DEFECT-HEARING LOSS SYNDROME (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955532 2120781 2125083 - 102029997 AGCD01070218;AGCD01070219;GBCE01137215;GBDF01080402;XM_013507587 XP_013363041 MODEL 9035358 protein-coding Fev FEV transcription factor, ETS family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN maternal behavior (ortholog); neuron fate specification (ortholog); neuron maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cerebrotendinous xanthomatosis (ortholog); Myocardial Ischemia (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955453 14449352 14453145 + 102013582 AGCD01044864;AGCD01044865;XM_005395719 XP_005395776 MODEL 8748236 pseudo LOC102011808 THO complex subunit 5 homolog pseudogene NW_004955540 390461 391906 + 102011808 AGCD01071274 MODEL 8997399 protein-coding Abcc2 ATP binding cassette subfamily C member 2 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN antibiotic metabolic process (ortholog); benzylpenicillin metabolic process (ortholog); bile acid and bile salt transport (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); alopecia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) NW_004955507 5724788 5791281 + 102018421 AGCD01065688;GBCQ01067528;XM_005407678 XP_005407735 MODEL 39133977 misc_rna 7SK 7SK RNA 8928362 protein-coding Epb42 erythrocyte membrane protein band 4.2 INVOLVED IN cell morphogenesis (ortholog); hemoglobin metabolic process (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spherocytosis (ortholog); hereditary spherocytosis type 1 (ortholog); FOUND IN ankyrin-1 complex (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) NW_004955416 9784211 9800453 - 102029963 AGCD01017099;GBBH01193362;XM_005381368 XP_005381425 MODEL 8716779 protein-coding Kctd4 potassium channel tetramerization domain containing 4 NW_004955518 2977055 2987676 - 102013203 AGCD01067789;GBCC01038644;XM_005409082;XM_005409083 XP_005409139;XP_005409140 MODEL 39131914 rrna 5S_rRNA 5S ribosomal RNA 8732285 protein-coding Chmp1b charged multivesicular body protein 1B ENCODES a protein that exhibits identical protein binding (ortholog); MIT domain binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cell division (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); endosome membrane (ortholog) NW_004955402 1196912 1199480 - 102015902 AGCD01000051;GBBH01206444;XM_005372575 XP_005372632 MODEL 8796704 protein-coding Anxa2 annexin A2 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); bone sialoprotein binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); body fluid secretion (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN AnxA2-p11 complex (ortholog); basolateral plasma membrane (ortholog); cell cortex (ortholog) NW_004955450 14545586 14574161 + 102009669 AGCD01042751;AGCD01042752;GBCB01023488;GBCE01001542;XM_013518924 XP_013374378 MODEL 39134251 misc_rna 7SK 7SK RNA 8996889 protein-coding Cnih1 cornichon family member 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955409 9001748 9013458 + 102027386 AGCD01009427;GBCQ01042261;GBDI01132596;XM_013510320 XP_013365774 MODEL 8813694 protein-coding Lmntd2 lamin tail domain containing 2 INVOLVED IN positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Beckwith-Wiedemann syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955476 11487918 11493281 + 102018826 AGCD01055460;GBDK01360050;XM_005401846;XM_005401847;XM_005401848;XM_005401849;XM_005401850;XM_005401851;XM_005401852;XM_005401853;XM_005401854;XM_005401855;XM_005401856;XM_005401857;XM_005401858;XM_005401859;XM_013502920;XM_013502921 XP_005401903;XP_005401904;XP_005401905;XP_005401906;XP_005401907;XP_005401908;XP_005401909;XP_005401910;XP_005401911;XP_005401912;XP_005401913;XP_005401914;XP_005401915;XP_005401916;XP_013358374;XP_013358375 MODEL 8984627 protein-coding Copg1 coat protein complex I subunit gamma 1 INVOLVED IN establishment of Golgi localization (ortholog); organelle transport along microtubule (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955429 13582676 13615801 + 102011890 AGCD01028755;AGCD01028756;AGCD01028757;GBDF01050042;XM_005386999 XP_005387056 MODEL 8713878 ncrna LOC102006829 uncharacterized LOC102006829 NW_004955554 382953 396502 + 102006829 AGCD01072948;GBDF01112731;XR_264945 MODEL 8799799 protein-coding LOC102007175 translationally-controlled tumor protein-like NW_004957362 28 1515 - 102007175 AGCD01080758;XM_005415228 XP_005415285 MODEL 8888683 protein-coding Cbx5 chromobox 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromosome condensation (ortholog); DNA damage response (ortholog); heterochromatin formation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromocenter (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955458 1486951 1529649 - 102004043 AGCD01047184;AGCD01047185;AGCD01047186;AGCD01047187;AGCD01047188;GBDF01009957;XM_005397212;XM_005397213;XM_005397215;XM_013520945 XP_005397269;XP_005397270;XP_005397272;XP_013376399 MODEL 9032292 protein-coding LOC102009408 von Ebner gland protein 1-like NW_004955513 2571693 2576942 + 102009408 AGCD01066882;GBBH01002065;XM_005408419 XP_005408476 MODEL 8924367 protein-coding Elavl2 ELAV like RNA binding protein 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of synapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); synapse (ortholog) NW_004955472 10550138 10710756 + 102029958 AGCD01053717;AGCD01053718;AGCD01053719;AGCD01053720;AGCD01053721;AGCD01053722;GBDF01227616;XM_005401159;XM_005401160;XM_005401161;XM_005401163;XM_013522923;XM_013522924;XM_013522925 XP_005401216;XP_005401217;XP_005401218;XP_005401220;XP_013378377;XP_013378378;XP_013378379 MODEL 8851048 protein-coding LOC102021909 TIP41-like protein NW_004955433 23172811 23173440 + 102021909 AGCD01031954;XM_013516111 XP_013371565 MODEL 9002129 protein-coding LOC102003956 beta-galactosidase-1-like protein 2 NW_004955412 35115232 35201119 + 102003956 AGCD01013400;AGCD01013401;AGCD01013402;AGCD01013403;AGCD01013404;AGCD01013405;GBDF01221467;XM_005378598 XP_005378655 MODEL 9062800 protein-coding Inpp4a inositol polyphosphate-4-phosphatase type I A ENCODES a protein that exhibits inositol-1,3,4-trisphosphate 4-phosphatase activity (ortholog); inositol-3,4-bisphosphate 4-phosphatase activity (ortholog); phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity (ortholog); INVOLVED IN regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autosomal dominant dyskeratosis congenita 1 (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); glutamatergic synapse (ortholog) NW_004955470 4930568 5040153 + 102003011 AGCD01052741;AGCD01052742;GBDF01050934;XM_005400714;XM_005400715;XM_005400718;XM_005400720;XM_005400722;XM_013522723;XM_013522724;XM_013522726;XM_013522727;XM_013522728;XM_013522729;XM_013522730;XM_013522732 XP_005400771;XP_005400772;XP_005400775;XP_005400777;XP_005400779;XP_013378177;XP_013378178;XP_013378180;XP_013378181;XP_013378182;XP_013378183;XP_013378184;XP_013378186 MODEL 8974237 protein-coding Grm8 glutamate metabotropic receptor 8 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); glutamate receptor activity (ortholog); group III metabotropic glutamate receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955479 7520537 8279942 - 102019168 AGCD01056414;AGCD01056415;AGCD01056416;AGCD01056417;AGCD01056418;AGCD01056419;AGCD01056420;AGCD01056421;AGCD01056422;AGCD01056423;AGCD01056424;AGCD01056425;AGCD01056426;AGCD01056427;AGCD01056428;AGCD01056429;AGCD01056430;AGCD01056431;GBDI01207199;XM_005402348;XM_005402349;XM_005402350;XM_005402351;XM_005402352 XP_005402405;XP_005402406;XP_005402407;XP_005402408;XP_005402409 MODEL 9031869 protein-coding LOC102017848 retinol dehydrogenase 16-like NW_004955458 4717769 4736029 - 102017848 AGCD01047433;AGCD01047434;AGCD01047435;AGCD01047436;GBDJ01117348;XM_005397335;XM_013520789 XP_005397392;XP_013376243 MODEL 8793702 pseudo LOC102004689 L-lactate dehydrogenase A chain pseudogene NW_004955414 13639147 13640738 - 102004689 AGCD01015115;XR_260167 MODEL 8817821 protein-coding Ahsg alpha 2-HS glycoprotein ENCODES a protein that exhibits receptor signaling protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); alopecia-mental retardation syndrome 1 (ortholog); calcinosis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955420 21071111 21078397 - 102004073 AGCD01021122;GBDK01362043;XM_005383274 XP_005383331 MODEL 8887067 protein-coding LOC102011365 immunoglobulin iota chain NW_004955442 17173705 17174412 - 102011365 AGCD01037944;GBBH01018271;XM_005391688 XP_005391745 MODEL 9039588 ncrna LOC102010585 uncharacterized LOC102010585 NW_004955418 15889079 15907996 + 102010585 AGCD01019113;GBDF01085813;XR_001233526;XR_001233527;XR_260559 MODEL 8955793 protein-coding Dlx2 distal-less homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN branching morphogenesis of a nerve (ortholog); cartilage development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955449 2907502 2909893 + 102015361 AGCD01041838;GBCE01092339;XM_005393217 XP_005393274 MODEL 8905476 protein-coding Igsf3 immunoglobulin superfamily member 3 INVOLVED IN axonogenesis (ortholog); cell differentiation (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal atresia (ortholog) NW_004955435 19703952 19796065 - 102003688 AGCD01033436;AGCD01033437;GBCE01077748;GBDJ01317924;XM_005389042 XP_005389099 MODEL 8906377 pseudo LOC102009792 MAP/microtubule affinity-regulating kinase 3-like NW_004955403 31079581 31081821 + 102009792 AGCD01002411 MODEL 8993330 protein-coding Camk2g calcium/calmodulin dependent protein kinase II gamma ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN calcium ion transport (ortholog); G1/S transition of mitotic cell cycle (ortholog); protein autophosphorylation (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; N-cadherin signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 59 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); glutamatergic synapse (ortholog); postsynaptic cytosol (ortholog) NW_004955437 18036614 18089876 + 102007467 AGCD01034774;GBCB01006648;GBDJ01011605;XM_013516755 XP_013372209 MODEL 9067035 protein-coding Etv1 ETS variant transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); mechanosensory behavior (ortholog); muscle organ development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colorectal Neoplasms (ortholog); lung cancer (ortholog) NW_004955410 17445496 17535856 - 102018368 AGCD01010989;GBDF01182370;XM_013510658;XM_013510659;XM_013510660;XM_013510662;XM_013510663 XP_013366112;XP_013366113;XP_013366114;XP_013366116;XP_013366117 MODEL 9008631 pseudo LOC102005717 hippocampus abundant transcript 1 protein pseudogene NW_004955490 4529263 4530710 - 102005717 AGCD01060188 MODEL 8851620 protein-coding Kank4 KN motif and ankyrin repeat domains 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955423 27328795 27363484 + 102012218 AGCD01024121;AGCD01024122;GBBH01150542;GBDJ01423805;XM_005385340;XM_005385341;XM_005385342 XP_005385397;XP_005385398;XP_005385399 MODEL 8707092 trna Trnai-gau transfer RNA isoleucine (anticodon GAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955500 8293826 8293897 + 101978795 AGCD01063986 MODEL 39131780 rrna 5S_rRNA 5S ribosomal RNA 8791740 protein-coding Clcn4 Cl-/H+ antiporter 4 ENCODES a protein that exhibits antiporter activity (ortholog); chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); non-motile cilium assembly (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN ciliary base (ortholog); early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955544 2922338 2999979 - 102008352 AGCD01071744;AGCD01071745;AGCD01071746;AGCD01071747;GBCB01042883;XM_005411399 XP_005411456 MODEL 8764012 protein-coding Aven apoptosis and caspase activation inhibitor INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955416 690440 712391 + 102023028 AGCD01016819;GBCE01054816;XM_005381166 XP_005381223 MODEL 8716765 protein-coding Cd47 CD47 molecule ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); fibrinogen binding (ortholog); protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN ATP export (ortholog); cell migration (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog); glutamatergic synapse (ortholog) NW_004955427 8704519 8740962 - 102012780 AGCD01027076;GBDJ01079526;XM_013515051 XP_013370505 MODEL 8713163 protein-coding LOC102004318 vomeronasal type-2 receptor 116-like NW_004955532 320637 360886 - 102004318 AGCD01070114;AGCD01070115;AGCD01070116;XM_013507576 XP_013363030 MODEL 8821564 protein-coding Fez1 fasciculation and elongation protein zeta 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); establishment of cell polarity (ortholog); establishment of mitochondrion localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); centrosome (ortholog) NW_004955412 26477995 26530686 - 102020643 AGCD01013190;AGCD01013191;AGCD01013192;GBDJ01029328;XM_005378460;XM_013511169;XM_013511170 XP_005378517;XP_013366623;XP_013366624 MODEL 39133978 misc_rna 7SK 7SK RNA 8876868 protein-coding C1qtnf12 C1q and TNF related 12 ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN negative regulation of gluconeogenesis (ortholog); negative regulation of inflammatory response (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 9541466 9545231 + 102028093 AGCD01059190;GBDF01279918;XM_005404246 XP_005404303 MODEL 8736725 pseudo LOC102008308 40S ribosomal protein SA pseudogene NW_004955414 6235311 6236262 - 102008308 AGCD01014914;XR_260239 MODEL 10209618 ncrna LOC106149981 uncharacterized LOC106149981 NW_004955459 4786821 4823661 + 106149981 AGCD01048030;GBBH01099677;XR_001236485 MODEL 8796603 protein-coding Adgrd1 adhesion G protein-coupled receptor D1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); regulation of skeletal muscle contraction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955482 1091081 1173087 - 102029081 AGCD01057201;AGCD01057202;GBDJ01139336;XM_005402985;XM_005402986;XM_005402987 XP_005403042;XP_005403043;XP_005403044 MODEL 8923475 protein-coding Eef1g eukaryotic translation elongation factor 1 gamma INVOLVED IN response to virus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955599 607021 615662 + 102016438 AGCD01076661;GBDF01002505;XM_005414794 XP_005414851 MODEL 8835267 protein-coding LOC102008663 butyrophilin subfamily 3 member A1-like NW_004955437 1060528 1076067 + 102008663 AGCD01034189;XM_013516725 XP_013372179 MODEL 8811292 protein-coding Grn granulin precursor ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN astrocyte activation involved in immune response (ortholog); blastocyst hatching (ortholog); chondrocyte proliferation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); aphasia (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) NW_004955451 17368600 17371981 + 102012599 AGCD01043745;GBDF01004036;XM_005394531;XM_005394532 XP_005394588;XP_005394589 MODEL 8734475 protein-coding Amhr2 anti-Mullerian hormone receptor type 2 ENCODES a protein that exhibits anti-Mullerian hormone receptor activity (ortholog); hormone binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); female gonad development (ortholog); male gonad development (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); dysgerminoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN plasma membrane (ortholog); serine/threonine protein kinase complex (ortholog) NW_004955458 693434 703026 + 102020884 AGCD01047148;GBDI01275831;XM_005397177;XM_013520957;XM_013520958;XM_013520959;XM_013520961;XM_013520962;XM_013520963;XM_013520964 XP_005397234;XP_013376411;XP_013376412;XP_013376413;XP_013376415;XP_013376416;XP_013376417;XP_013376418 MODEL 8983154 protein-coding Cckbr cholecystokinin B receptor ENCODES a protein that exhibits cholecystokinin receptor activity (ortholog); gastrin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN behavioral defense response (ortholog); cholecystokinin signaling pathway (ortholog); digestive tract development (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); colitis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955414 22001351 22011275 + 102018177 AGCD01015440;GBBH01051685;XM_005380128;XM_005380130 XP_005380185;XP_005380187 MODEL 9040769 protein-coding Hyal3 hyaluronidase 3 ENCODES a protein that exhibits hyaluronoglucuronidase activity (ortholog); hyalurononglucosaminidase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); urinary bladder cancer (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog) NW_004955532 2107019 2112356 - 102028465 AGCD01070217;GBBH01160662;GBDK01192130;XM_005410254 XP_005410311 MODEL 8809338 protein-coding Lmo1 LIM domain only 1 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of T cell homeostatic proliferation (ortholog); ASSOCIATED WITH neuroblastoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955414 24021275 24072098 - 102017224 AGCD01015532;AGCD01015533;GBDI01322766;XM_005380218;XM_005380219;XM_005380220;XM_013511707;XM_013511708 XP_005380275;XP_005380276;XP_005380277;XP_013367161;XP_013367162 MODEL 39131559 protein-coding GHRH growth hormone releasing hormone 8891459 ncrna LOC102011810 uncharacterized LOC102011810 NW_004955440 4672850 4697012 - 102011810 AGCD01036266;GBDF01015047;XR_262004 MODEL 8860548 protein-coding Abcc3 ATP binding cassette subfamily C member 3 ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); canalicular bile acid transport (ortholog); leukotriene transport (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; etoposide pharmacodynamics pathway; etoposide pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955451 11087246 11130108 - 102003194 AGCD01043342;GBDJ01086374;XM_005394128;XM_005394129 XP_005394185;XP_005394186 MODEL 9012606 protein-coding Acp4 acid phosphatase 4 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN negative regulation of ERBB4 signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of protein processing (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1J (ortholog); cholangiocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog); synaptic membrane (ortholog) NW_004955559 481953 488464 - 102013765 AGCD01073587;GBDF01196190;XM_005412767;XM_005412769;XM_005412770;XM_013509062;XM_013509063;XM_013509064 XP_005412824;XP_005412826;XP_005412827;XP_013364516;XP_013364517;XP_013364518 MODEL 8909017 pseudo LOC102012961 reactive oxygen species modulator 1 pseudogene NW_004955479 10848845 10849614 + 102012961 AGCD01056562 MODEL 8753956 protein-coding Cers3 ceramide synthase 3 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); cornification (ortholog); epidermis development (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 9 (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nucleoplasm (ortholog) NW_004955416 27461950 27577145 - 102007994 AGCD01017616;AGCD01017617;AGCD01017618;GBCC01014821;XM_005381640;XM_005381641;XM_013512586;XM_013512587 XP_005381697;XP_005381698;XP_013368040;XP_013368041 MODEL 8719200 protein-coding Inpp4b inositol polyphosphate-4-phosphatase type II B ENCODES a protein that exhibits inositol-1,3,4-trisphosphate 4-phosphatase activity (ortholog); inositol-3,4-bisphosphate 4-phosphatase activity (ortholog); lipid binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); negative regulation of osteoclast differentiation (ortholog); phosphatidylinositol dephosphorylation (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955471 938005 1291695 + 102010359 AGCD01052969;AGCD01052970;AGCD01052971;AGCD01052972;AGCD01052973;AGCD01052974;GBDF01155666;XM_005400855;XM_005400857;XM_005400858 XP_005400912;XP_005400914;XP_005400915 MODEL 9039599 protein-coding LOC102010591 acyl-CoA desaturase 1 NW_004955485 9758703 9773277 + 102010591 AGCD01058780;GBDK01014034;XM_005403913 XP_005403970 MODEL 8974742 pseudo LOC102011366 protein RUFY3 pseudogene NW_004955442 14907176 14908675 + 102011366 AGCD01037848 MODEL 39133979 misc_rna 7SK 7SK RNA 39131915 rrna 5S_rRNA 5S ribosomal RNA 8845043 protein-coding Dlx3 distal-less homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN blood vessel development (ortholog); BMP signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 4 (ortholog); ectodermal dysplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 11635027 11640091 + 102017293 AGCD01043360;AGCD01043361;GBCE01085065;XM_005394184 XP_005394241 MODEL 39134252 misc_rna 7SK 7SK RNA 8932825 protein-coding Chmp2a charged multivesicular body protein 2A ENCODES a protein that exhibits membrane bending activity (ortholog); phosphatidylcholine binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); chromatin (ortholog) NW_004955584 1156828 1160056 - 102021404 AGCD01075982;GBDF01047694;XM_005414402;XM_005414403;XM_013509884 XP_005414459;XP_005414460;XP_013365338 MODEL 8909802 protein-coding Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 ENCODES a protein that exhibits calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN long-term memory (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); COVID-19 (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); postsynaptic density (ortholog) NW_004955452 1044696 1046657 - 102019015 AGCD01043829;GBDF01015827;GBDI01179249;XM_005394680 XP_005394737 MODEL 8903092 protein-coding Coprs coordinator of PRMT5 and differentiation stimulator ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); muscle organ development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN methylosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955481 6794088 6797723 - 102020118 AGCD01057035;GBDF01046061;GBDJ01349647;XM_013503534 XP_013358988 MODEL 8764586 protein-coding Anxa3 annexin A3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); phospholipase A2 inhibitor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); defense response to bacterium (ortholog); hippocampus development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955433 2981113 3043894 + 102021162 AGCD01031408;AGCD01031409;AGCD01031410;AGCD01031411;GBCE01001166;GBCQ01036837;XM_013516133 XP_013371587 MODEL 8853375 pseudo LOC102007176 uncharacterized LOC102007176 NW_004955403 21438343 21464628 - 102007176 AGCD01002196 MODEL 8896414 pseudo LOC102009409 unconventional prefoldin RPB5 interactor 1 pseudogene NW_004955431 245211 246820 + 102009409 AGCD01029861 MODEL 8967301 protein-coding LOC102006830 hemoglobin subunit alpha NW_004955442 17005234 17006044 - 102006830 AGCD01037931;GBBH01003742;XM_005391672 XP_005391729 MODEL 8725945 protein-coding Ccl1 C-C motif chemokine ligand 1 ENCODES a protein that exhibits chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to interleukin-17 (ortholog); chemotaxis (ortholog); ASSOCIATED WITH asthma (ortholog); chronic obstructive pulmonary disease (ortholog); endometriosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955481 9085943 9089147 - 102004708 AGCD01057094;GBDK01334841;XM_005402841;XM_005402842 XP_005402898;XP_005402899 MODEL 8931621 protein-coding Cnih2 cornichon family AMPA receptor auxiliary protein 2 INVOLVED IN localization within membrane (ortholog); negative regulation of anterograde synaptic vesicle transport (ortholog); negative regulation of receptor localization to synapse (ortholog); ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite (ortholog); dendritic shaft (ortholog) NW_004955422 19033201 19035135 - 102016608 AGCD01022972;GBDF01155478;XM_013514007 XP_013369461 MODEL 9029763 protein-coding Avil advillin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); Arp2/3 complex binding (ortholog); INVOLVED IN actin filament organization (ortholog); cilium assembly (ortholog); nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin filament (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) NW_004955458 5499392 5523463 - 102003626 AGCD01047495;AGCD01047496;AGCD01047497;GBBH01022613;GBDJ01116167;XM_013520970;XM_013520971 XP_013376424;XP_013376425 MODEL 8981595 protein-coding Ahsp alpha hemoglobin stabilizing protein INVOLVED IN erythrocyte differentiation (ortholog); protein folding (ortholog); protein stabilization (ortholog); ASSOCIATED WITH cerebral infarction (ortholog); coronary restenosis (ortholog); Fetal Death (ortholog); FOUND IN cytoplasm (ortholog) NW_004955493 8337761 8344497 + 102007783 AGCD01061291;GBDJ01142828;XM_005405323;XM_005405324 XP_005405380;XP_005405381 MODEL 8957371 protein-coding Arfgap1 ARF GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi membrane (ortholog); postsynaptic density (ortholog); synapse (ortholog) NW_004955528 878837 893427 - 102016415 AGCD01069547;GBBH01164590;XM_005409986;XM_005409988;XM_013507465;XM_013507466;XM_013507467;XM_013507468;XM_013507469;XM_013507470;XM_013507471;XM_013507472;XM_013507473;XM_013507474 XP_005410043;XP_005410045;XP_013362919;XP_013362920;XP_013362921;XP_013362922;XP_013362923;XP_013362924;XP_013362925;XP_013362926;XP_013362927;XP_013362928 MODEL 9002152 ncrna LOC102004322 uncharacterized LOC102004322 NW_004955438 21001399 21004768 - 102004322 AGCD01035528;GBDJ01373094;XR_001235152 MODEL 39133852 misc_rna 7SK 7SK RNA 8826056 protein-coding LOC102017852 mast cell protease 4-like NW_004955409 35817333 35819685 + 102017852 AGCD01010433;XM_005377176 XP_005377233 MODEL 8803107 protein-coding Cd48 CD48 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN mast cell activation (ortholog); natural killer cell activation (ortholog); signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); membrane raft (ortholog) NW_004955468 12398671 12411241 - 102020104 AGCD01052151;AGCD01052152;GBDI01185855;XM_005400214;XM_005400215;XM_005400216;XM_013522521 XP_005400271;XP_005400272;XP_005400273;XP_013377975 MODEL 8971374 protein-coding Igsf5 immunoglobulin superfamily member 5 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell surface (ortholog) NW_004955407 38468873 38510040 + 102027815 AGCD01007807;AGCD01007808;GBCQ01017451;XM_005375775;XM_005375776;XM_005375777;XM_005375778 XP_005375832;XP_005375833;XP_005375834;XP_005375835 MODEL 8918349 protein-coding Cdkal1 CDKAL1 threonylcarbamoyladenosine tRNA methylthiotransferase ENCODES a protein that exhibits tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity (ortholog); INVOLVED IN maintenance of translational fidelity (ortholog); tRNA methylthiolation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Birth Weight (ortholog); Body Weight (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); rough endoplasmic reticulum (ortholog) NW_004955483 5398748 5993071 - 102015012 AGCD01057761;AGCD01057762;AGCD01057763;AGCD01057764;AGCD01057765;AGCD01057766;AGCD01057767;GBBH01221864;XM_005403380;XM_005403381;XM_013503828 XP_005403437;XP_005403438;XP_013359282 MODEL 8874082 protein-coding Etv2 ETS variant transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); blood vessel morphogenesis (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Aortic Remodeling (ortholog); congenital heart disease (ortholog); hypoplastic left heart syndrome (ortholog) NW_004955468 4857023 4859926 + 102026095 AGCD01051923;GBDF01048409;XM_013522386 XP_013377840 MODEL 9059073 trna Trnai-uau transfer RNA isoleucine (anticodon UAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955468;NW_004955465;NW_004955441;NW_004955483 149799;13289424;10151035;194221 149891;13289517;10151126;194314 +;+;+;- 101978796 AGCD01037076;AGCD01050597;AGCD01051684;AGCD01057602 MODEL 8849488 protein-coding Cbx6 chromobox 6 ENCODES a protein that exhibits single-stranded RNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH glioblastoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); heterochromatin (ortholog); nuclear body (ortholog) NW_004955413 24955721 24966015 - 102026204 AGCD01014388;GBBH01142614;XM_005379281;XM_005379282 XP_005379338;XP_005379339 MODEL 8705385 protein-coding LOC102021910 olfactory receptor 10C1-like NW_004955524 278339 279310 + 102021910 AGCD01068674;XM_005409658 XP_005409715 MODEL 39131781 rrna 5S_rRNA 5S ribosomal RNA 8781077 protein-coding Elavl3 ELAV like RNA binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); polycystic ovary syndrome (ortholog) NW_004955495 2338939 2360843 - 102025374 AGCD01061767;AGCD01061768;GBDF01254190;XM_005405670;XM_005405671 XP_005405727;XP_005405728 MODEL 8764453 protein-coding Clcn5 Cl-/H+ antiporter 5 ENCODES a protein that exhibits identical protein binding (ortholog); voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); endocytosis (ortholog); renal system process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute Tubulointerstitial Nephritis (ortholog); benign familial hematuria (ortholog); FOUND IN apical part of cell (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955543 1076988 1256352 + 102015983 AGCD01071612;AGCD01071613;AGCD01071614;AGCD01071615;GBBH01191026;XM_005411351;XM_013508169;XM_013508170;XM_013508171 XP_005411408;XP_013363623;XP_013363624;XP_013363625 MODEL 8991079 protein-coding Lmo2 LIM domain only 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN embryonic hemopoiesis (ortholog); negative regulation of erythrocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) NW_004955422 12354865 12362026 + 102019401 AGCD01022791;GBBH01063389;GBDF01194295;XM_005384152 XP_005384209 MODEL 8931860 protein-coding Epc1 enhancer of polycomb homolog 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression, epigenetic (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); NuA4 histone acetyltransferase complex (ortholog); nuclear body (ortholog) NW_004955429 23819261 23910279 - 102005825 AGCD01029081;AGCD01029082;AGCD01029083;GBCE01136615;XM_005387225;XM_013515434 XP_005387282;XP_013370888 MODEL 8728259 protein-coding LOC102009793 uncharacterized LOC102009793 NW_004955451 10468343 10479347 + 102009793 AGCD01043324;XM_013519062 XP_013374516 MODEL 8939181 protein-coding Fez2 fasciculation and elongation protein zeta 2 INVOLVED IN negative regulation of autophagosome assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955441 4421936 4456070 - 102027790 AGCD01036839;GBCQ01095795;GBDJ01316168;XM_013517614;XM_013517615 XP_013373068;XP_013373069 MODEL 8783693 protein-coding Cers4 ceramide synthase 4 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); sphingolipid biosynthetic process (ortholog); sphingomyelin biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955563 1100410 1105662 - 102016111 AGCD01074114;AGCD01074115;GBBH01025992;GBDF01079030;XM_013509155 XP_013364609 MODEL 8944247 protein-coding C1qtnf2 C1q and TNF related 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); positive regulation of fatty acid oxidation (ortholog); positive regulation of glycogen biosynthetic process (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955408 14219263 14266832 - 102026189 AGCD01008389;AGCD01008390;AGCD01008391;GBDI01008429;XM_005376261;XM_005376262;XM_005376264;XM_013508952;XM_013508968 XP_005376318;XP_005376319;XP_005376321;XP_013364406;XP_013364422 MODEL 8790503 protein-coding LOC102008665 dnaJ homolog subfamily B member 6-like NW_004955438 5105330 5113520 - 102008665 AGCD01035057;GBDF01094584;GBDF01237045;XM_013517150 XP_013372604 MODEL 10341850 ncrna LOC106149982 uncharacterized LOC106149982 NW_004955459 581712 585247 + 106149982 AGCD01047940;GBCB01122068;XR_001236486 MODEL 39133980 misc_rna 7SK 7SK RNA 8775139 protein-coding Kansl1 KAT8 regulatory NSL complex subunit 1 INVOLVED IN regulation of mitochondrial transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN histone acetyltransferase complex (ortholog); mitochondrion (ortholog); MLL1 complex (ortholog) NW_004955478 10039687 10221170 + 102012645 AGCD01056117;AGCD01056118;AGCD01056119;AGCD01056120;AGCD01056121;AGCD01056122;AGCD01056123;AGCD01056124;AGCD01056125;GBDF01118701;XM_005402256;XM_005402258 XP_005402313;XP_005402315 MODEL 39131916 rrna 5S_rRNA 5S ribosomal RNA 8866852 protein-coding Arfgap2 ARF GTPase activating protein 2 ENCODES a protein that exhibits channel activator activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN COPI coating of Golgi vesicle (ortholog); positive regulation of cytokine production (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955422 995672 1006008 + 102029755 AGCD01022444;GBDF01047823;XM_005384002;XM_005384003 XP_005384059;XP_005384060 MODEL 8920953 protein-coding Eef2 eukaryotic translation elongation factor 2 ENCODES a protein that exhibits 5S rRNA binding (ortholog); actin filament binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); glial cell proliferation (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; translation elongation pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955495 4800103 4807714 + 102015327 AGCD01061951;GBDF01004729;XM_005405819 XP_005405876 MODEL 8833961 protein-coding Dlx4 distal-less homeobox 4 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); melanoma (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 11652249 11660083 - 102017833 AGCD01043362;GBCE01057103;XM_005394185;XM_005394186;XM_005394187;XM_013519108;XM_013519109 XP_005394242;XP_005394243;XP_005394244;XP_013374562;XP_013374563 MODEL 9039430 protein-coding Amigo1 adhesion molecule with Ig like domain 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN axonal fasciculation (ortholog); axonogenesis (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); neuronal cell body membrane (ortholog) NW_004955435 12918270 12930362 - 102004746 AGCD01033174;GBDF01055408;GBDI01386202;XM_005388875;XM_005388878 XP_005388932;XP_005388935 MODEL 8980427 protein-coding Chmp2b charged multivesicular body protein 2B ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cognition (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955407 6014478 6047916 - 102026186 AGCD01006940;AGCD01006941;AGCD01006942;GBBH01142066;XM_005375538 XP_005375595 MODEL 8736953 protein-coding Hyal4 hyaluronidase 4 ENCODES a protein that exhibits chondroitin hydrolase activity (ortholog); hyalurononglucosaminidase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN cell surface (ortholog); lysosome (ortholog) NW_004955479 5355667 5364092 + 102021657 AGCD01056348;GBDK01199344;XM_005402453 XP_005402510 MODEL 8820897 pseudo LOC102004690 glucocorticoid modulatory element-binding protein 1 pseudogene NW_004955469 10849261 10850647 + 102004690 AGCD01052551 MODEL 9000234 protein-coding Ghrh growth hormone releasing hormone ENCODES a protein that exhibits growth hormone-releasing hormone activity (ortholog); growth hormone-releasing hormone receptor binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autoimmune polyendocrine syndrome type 1 (ortholog); breast cancer (ortholog); FOUND IN axon terminus (ortholog); extracellular region (ortholog); perikaryon (ortholog) NW_004955422 24481246 24490529 + 102016066 AGCD01023220;GBDF01097802;XM_013513839 XP_013369293 MODEL 8919697 pseudo LOC102011811 PCNA-associated factor pseudogene NW_004955440 19528120 19528458 - 102011811 AGCD01036637 MODEL 8880640 ncrna LOC102012964 uncharacterized LOC102012964 NW_004955418 2720066 2727457 + 102012964 AGCD01018774;GBDF01250695;XR_001233484;XR_001233485 MODEL 9003294 protein-coding Kctd5 potassium channel tetramerization domain containing 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955442 14658612 14684928 - 102020293 AGCD01037832;GBDJ01064500;XM_005391416 XP_005391473 MODEL 8986048 protein-coding LOC102006831 uncharacterized LOC102006831 NW_004955442 12111453 12371491 - 102006831 AGCD01037728;AGCD01037729;AGCD01037730;XM_005391851 XP_005391908 MODEL 39131782 rrna 5S_rRNA 5S ribosomal RNA 9043072 pseudo LOC102008312 60S ribosomal protein L7 pseudogene NW_004955479 9952660 9953327 - 102008312 AGCD01056510 MODEL 8935556 protein-coding LOC102003957 asialoglycoprotein receptor 2 NW_004955467 9753634 9773834 + 102003957 AGCD01051524;GBDJ01193720;XM_005399561;XM_005399562;XM_005399563;XM_005399564;XM_005399565;XM_005399566;XM_005399567;XM_013522259;XM_013522260;XM_013522261;XM_013522262;XM_013522263;XM_013522264;XM_013522265 XP_005399618;XP_005399619;XP_005399620;XP_005399621;XP_005399622;XP_005399623;XP_005399624;XP_013377713;XP_013377714;XP_013377715;XP_013377716;XP_013377717;XP_013377718;XP_013377719 MODEL 8979398 protein-coding Aida axin interactor, dorsalization associated ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of JUN kinase activity (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955520 1819617 1851273 + 102017806 AGCD01068062;AGCD01068063;GBBH01062431;GBDF01236570;XM_005409254 XP_005409311 MODEL 9020287 protein-coding Adgrd2 adhesion G protein-coupled receptor D2 ASSOCIATED WITH polycystic ovary syndrome (ortholog) NW_004955419 3656533 3678452 - 102024231 AGCD01019732;AGCD01019733;GBDF01177352;GBDF01303845;XM_013513083 XP_013368537 MODEL 39133853 misc_rna 7SK 7SK RNA 8951482 protein-coding Grp gastrin releasing peptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN cellular response to sodium phosphate (ortholog); mast cell degranulation (ortholog); negative regulation of transmission of nerve impulse (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); Aortic Calcification (ortholog); cerebrovascular disease (ortholog); FOUND IN extracellular region (ortholog); neuron projection (ortholog); neuronal dense core vesicle (ortholog) NW_004955402 43382608 43393452 + 102013890 AGCD01001072;GBDJ01214066;XM_005373000 XP_005373057 MODEL 8807962 protein-coding LOC102005721 RNA-binding protein 14 NW_004955422 18730230 18755479 - 102005721 AGCD01022960;GBBH01033313;XM_005384379;XM_005384380;XM_005384381;XM_005384383;XM_005384385;XM_013513904;XM_013513905;XM_013513906 XP_005384436;XP_005384437;XP_005384438;XP_005384440;XP_005384442;XP_013369358;XP_013369359;XP_013369360 MODEL 8764958 ncrna LOC102008318 uncharacterized LOC102008318 NW_004955484 4122273 4129579 - 102008318 AGCD01058202;GBDF01081938;XR_263880;XR_263882 MODEL 8998341 protein-coding Camk2n2 calcium/calmodulin dependent protein kinase II inhibitor 2 ENCODES a protein that exhibits calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; FOUND IN nucleus (ortholog); synapse (ortholog) NW_004955420 23226270 23227403 + 102026118 AGCD01021236;GBDF01205796;XM_005383345 XP_005383402 MODEL 9053379 protein-coding Cops2 COP9 signalosome subunit 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); inner cell mass cell proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); endometriosis (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); intercellular bridge (ortholog) NW_004955409 4859971 4888487 + 102006217 AGCD01009300;AGCD01009301;GBDF01082166;XM_005376679;XM_005376680 XP_005376736;XP_005376737 MODEL 8900090 protein-coding Anxa4 annexin A4 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of interleukin-8 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) NW_004955424 15323604 15389136 - 102014261 AGCD01024706;AGCD01024707;AGCD01024708;AGCD01024709;AGCD01024710;GBDF01015085;XM_005385639 XP_005385696 MODEL 9062925 pseudo LOC102009413 protein PBDC1 pseudogene NW_004955433 10564178 10564675 + 102009413 AGCD01031632 MODEL 8919989 pseudo LOC102021911 protein kinase C iota type pseudogene NW_004955435 4713737 4714888 - 102021911 AGCD01032843 MODEL 8767407 protein-coding Ccl14 C-C motif chemokine ligand 14 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955481 10336758 10340397 - 102022701 AGCD01057142;GBDK01277516;XM_005402898 XP_005402955 MODEL 8883340 protein-coding Acp5 acid phosphatase 5, tartrate resistant ENCODES a protein that exhibits acid phosphatase activity (ortholog); ferric iron binding (ortholog); ferrous iron binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); bone resorption (ortholog); cellular response to zinc ion starvation (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); autoimmune hemolytic anemia (ortholog); brain disease (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) NW_004955495 2418113 2421181 + 102026992 AGCD01061772;GBCB01039042;GBDI01008532;XM_013505121 XP_013360575 MODEL 9042789 protein-coding Inpp5a inositol polyphosphate-5-phosphatase A ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); inositol-polyphosphate 5-phosphatase activity (ortholog); INVOLVED IN inositol phosphate metabolic process (ortholog); negative regulation of calcium-mediated signaling (ortholog); negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955477 10148032 10384361 + 102026635 AGCD01055691;AGCD01055692;AGCD01055693;AGCD01055694;GBDF01085133;GBDK01129426;XM_005402047 XP_005402104 MODEL 8746054 protein-coding Clcn6 Cl-/H+ antiporter 6 ENCODES a protein that exhibits voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN late endosome membrane (ortholog) NW_004955486 2066317 2096317 - 102005713 AGCD01058987;AGCD01058988;GBBH01208092;XM_005403984;XM_005403986;XM_013504261 XP_005404041;XP_005404043;XP_013359715 MODEL 9004579 pseudo LOC102011370 olfactory receptor 7G1-like NW_004955563 374406 376655 + 102011370 AGCD01074064 MODEL 8795159 protein-coding Epc2 enhancer of polycomb 2 INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleosome (ortholog) NW_004955440 14573960 14645171 + 102026045 AGCD01036473;GBDK01240424;XM_005390801 XP_005390858 MODEL 9039010 protein-coding LOC102011813 keratin, type II cytoskeletal 74 NW_004955547 2973452 2981010 - 102011813 AGCD01072302;GBDF01116746;XM_005411949 XP_005412006 MODEL 39131632 rrna 5S_rRNA 5S ribosomal RNA 8917337 protein-coding Cd5 CD5 molecule INVOLVED IN apoptotic signaling pathway (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); T cell costimulation (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955511 5656333 5670510 + 102003896 AGCD01066573;AGCD01066574;GBDI01069952;XM_005408118;XM_005408119 XP_005408175;XP_005408176 MODEL 8810267 protein-coding C1qtnf3 C1q and TNF related 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); glucose homeostasis (ortholog); intracellular triglyceride homeostasis (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955426 19588637 19606557 - 102028440 AGCD01026549;GBCB01010684;XM_005386168;XM_005386169 XP_005386225;XP_005386226 MODEL 8997258 pseudo LOC102008668 protein S100-A10 pseudogene NW_004955547 477402 477949 + 102008668 AGCD01072162;XM_005411852 MODEL 8709743 trna Trnak-cuu transfer RNA lysine (anticodon CUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978827 AGCD01037806;AGCD01051106;AGCD01057606;AGCD01069830;AGCD01074502 MODEL 8907898 protein-coding Cdkl1 cyclin dependent kinase like 1 INVOLVED IN heart development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955409 12419556 12472215 + 102023234 AGCD01009548;AGCD01009549;GBBH01119648;XM_005376824;XM_005376825 XP_005376881;XP_005376882 MODEL 8902748 protein-coding Cnih3 cornichon family AMPA receptor auxiliary protein 3 ENCODES a protein that exhibits channel regulator activity (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of AMPA receptor activity (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH endometriosis (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendritic shaft (ortholog); glutamatergic synapse (ortholog) NW_004955520 818584 854340 - 102030466 AGCD01068032;GBCB01059461;XM_013507018 XP_013362472 MODEL 8936663 protein-coding Chmp4b charged multivesicular body protein 4B ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); ASSOCIATED WITH cataract 31 multiple types (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955422 27482239 27526798 - 102026226 AGCD01023323;AGCD01023324;AGCD01023325;AGCD01023326;GBCB01007585;GBDK01003467;XM_005384838 XP_005384895 MODEL 8756577 protein-coding Abcc4 ATP binding cassette subfamily C member 4 (PEL blood group) ENCODES a protein that exhibits ABC-type 3',5'-cyclic GMP transmembrane transporter activity (ortholog); ABC-type bile acid transporter activity (ortholog); ABC-type glutathione S-conjugate transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); cAMP transport (ortholog); cilium assembly (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; lamivudine pharmacokinetics pathway; mercaptopurine pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); external side of apical plasma membrane (ortholog) NW_004955404 14700808 14927944 + 102025647 AGCD01003520;AGCD01003521;AGCD01003522;AGCD01003523;GBCB01100077;GBCQ01064634;XM_005374108;XM_005374109 XP_005374165;XP_005374166 MODEL 8834479 protein-coding Cbx7 chromobox 7 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9me2/3 reader activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN developmental process involved in reproduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH anaplastic thyroid carcinoma (ortholog); B-cell lymphoma (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955413 25079627 25100039 - 102010792 AGCD01014395;GBBH01001308;GBDK01014246;XM_013511481 XP_013366935 MODEL 8872779 protein-coding Avl9 AVL9 cell migration associated INVOLVED IN cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN recycling endosome (ortholog) NW_004955617 61225 129222 + 102007841 AGCD01077269;AGCD01077270;GBCE01039356;XM_013510145;XR_001232583;XR_001232584;XR_001232585;XR_001232586;XR_001232587;XR_001232588 XP_013365599 MODEL 8736223 pseudo LOC102004327 nuclear inhibitor of protein phosphatase 1 pseudogene NW_004955548 1082609 1083641 + 102004327 AGCD01072356 MODEL 8782805 gene LOC102010596 T-cell receptor beta-1 chain C region-like NW_004955494 1000095 1115539 - 102010596 AGCD01061390;AGCD01061391;XM_005405393 MODEL 8747588 pseudo LOC102009415 cell division cycle and apoptosis regulator protein 1 pseudogene NW_004955434 8711959 8714535 + 102009415 AGCD01032265 MODEL 8731627 pseudo LOC102017856 40S ribosomal protein SA pseudogene NW_004955412 30610458 30611355 - 102017856 AGCD01013303 MODEL 8743223 protein-coding LOC102021913 melanoma-associated antigen B1-like NW_004955531 838720 839739 - 102021913 AGCD01070014;XM_005410143 XP_005410200 MODEL 8902833 protein-coding Lmo3 LIM domain only 3 INVOLVED IN exploration behavior (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of fat cell differentiation (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 13183294 13238875 - 102007980 AGCD01014009;AGCD01014010;GBDI01299626;XM_005379027;XM_005379028;XM_005379029;XM_005379030;XM_005379031;XM_005379032;XM_005379033;XM_005379034;XM_013511273;XM_013511274 XP_005379084;XP_005379085;XP_005379086;XP_005379087;XP_005379088;XP_005379089;XP_005379090;XP_005379091;XP_013366727;XP_013366728 MODEL 8715429 ncrna LOC102009800 uncharacterized LOC102009800 NW_004955407 17251314 17300456 + 102009800 AGCD01007243;AGCD01007244;AGCD01007245;AGCD01007246;GBDF01192314;XR_001231024 MODEL 8801941 protein-coding Adgre1 adhesion G protein-coupled receptor E1 INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell periphery (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955495 2601413 2674738 - 102030546 AGCD01061788;AGCD01061789;AGCD01061790;AGCD01061791;AGCD01061792;AGCD01061793;GBBH01172386;GBBH01172387;XM_013505356 XP_013360810 MODEL 9065904 protein-coding Fezf1 FEZ family zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); cell dedifferentiation (ortholog); forebrain anterior/posterior pattern specification (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hypogonadotropic hypogonadism 22 with or without anosmia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955479 3945358 3953924 - 102009944 AGCD01056312;GBDF01087471;GBDF01087472;XM_005402319;XM_005402320;XM_013503255 XP_005402376;XP_005402377;XP_013358709 MODEL 39133981 misc_rna 7SK 7SK RNA 8935691 pseudo LOC102007177 60S ribosomal protein L7a-like NW_004955451 3799761 3801516 + 102007177 AGCD01043072;AGCD01043073;XR_262625 MODEL 8737136 pseudo LOC102005723 putative olfactory receptor 9A1 NW_004955494 1730333 1731273 + 102005723 AGCD01061422 MODEL 8741657 protein-coding Etv3l ETS variant transcription factor 3 like ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog) NW_004955545 3121363 3132748 - 102017507 AGCD01071933;GBDI01354928;XM_005411734;XM_013508351;XM_013508352;XM_013508353;XM_013508354;XM_013508355;XM_013508356;XM_013508357;XR_001232196 XP_005411791;XP_013363805;XP_013363806;XP_013363807;XP_013363808;XP_013363809;XP_013363810;XP_013363811 MODEL 8993048 protein-coding Kansl1l KAT8 regulatory NSL complex subunit 1 like ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Familial Prostate Cancer (ortholog) NW_004955457 5333490 5424632 + 102030279 AGCD01046817;AGCD01046818;GBDF01023878;XM_005396949 XP_005397006 MODEL 39131936 rrna 5S_rRNA 5S ribosomal RNA 8962851 protein-coding Dlx5 distal-less homeobox 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Birth Weight (ortholog); bone development disease (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955432 13429832 13434160 - 102021270 AGCD01031016;GBDJ01090320;XM_005388074;XM_005388075 XP_005388131;XP_005388132 MODEL 8889919 protein-coding Camk4 calcium/calmodulin dependent protein kinase IV ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN gene expression (ortholog); long-term memory (ortholog); myeloid dendritic cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); GABA-ergic synapse (ortholog) NW_004955418 3664352 3887175 - 102016710 AGCD01018797;AGCD01018798;AGCD01018799;AGCD01018800;AGCD01018801;GBDF01152935;GBDF01152936;XM_005382166 XP_005382223 MODEL 8949791 protein-coding Elavl4 ELAV like RNA binding protein 4 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); associative learning (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH High Myopia (ortholog); hypothyroidism (ortholog); learning disability (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955464 8699142 8847289 - 102028278 AGCD01050095;AGCD01050096;AGCD01050097;GBDF01146229;XM_005398613;XM_005398615;XM_005398616;XM_005398617;XM_005398618;XM_005398619;XM_005398622 XP_005398670;XP_005398672;XP_005398673;XP_005398674;XP_005398675;XP_005398676;XP_005398679 MODEL 8732752 protein-coding LOC102004691 leucine-rich repeat-containing protein 51 NW_004955414 19236475 19252002 - 102004691 AGCD01015308;GBBH01154964;XM_005380016;XM_005380017;XM_005380018;XM_013511820;XM_013511821;XM_013511822;XM_013511823 XP_005380073;XP_005380074;XP_005380075;XP_013367274;XP_013367275;XP_013367276;XP_013367277 MODEL 9023047 protein-coding Ghrhr growth hormone releasing hormone receptor ENCODES a protein that exhibits growth factor binding (ortholog); growth hormone-releasing hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); disorder of sexual development (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955410 32084210 32114844 + 102023563 AGCD01011335;GBCQ01127742;XM_005377509;XM_005377510;XM_005377511 XP_005377566;XP_005377567;XP_005377568 MODEL 9029485 protein-coding Amigo2 adhesion molecule with Ig like domain 2 INVOLVED IN cerebellum development (ortholog); heterophilic cell-cell adhesion (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); gastric adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955500 6134736 6138075 - 102013948 AGCD01063871;GBDF01253270;GBDK01142053;XM_005406602 XP_005406659 MODEL 8752979 protein-coding LOC102012965 uncharacterized LOC102012965 NW_004955481 9182564 9207329 + 102012965 AGCD01057096;AGCD01057097;GBDF01015936;XM_005402931 XP_005402988 MODEL 8748513 protein-coding Chmp4c charged multivesicular body protein 4C ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); Ovarian Neoplasms (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); Flemming body (ortholog) NW_004955417 96674 135601 + 102025003 AGCD01017786;AGCD01017787;GBBH01047695;XM_005381721 XP_005381778 MODEL 8784197 protein-coding Kctd6 potassium channel tetramerization domain containing 6 ENCODES a protein that exhibits ankyrin binding (ortholog); cullin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog) NW_004955430 1667385 1670203 - 102006804 AGCD01029130;GBCQ01175341;GBDK01323183;XM_013515693 XP_013371147 MODEL 8738925 pseudo LOC102009416 60S ribosomal protein L13 pseudogene NW_004955435 16416187 16416933 - 102009416 AGCD01033326;XR_261708 MODEL 8903208 protein-coding Abcc5 ATP binding cassette subfamily C member 5 ENCODES a protein that exhibits ABC-type 3',5'-cyclic GMP transmembrane transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN cAMP transport (ortholog); cGMP transport (ortholog); export across plasma membrane (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); endosome membrane (ortholog) NW_004955420 23447920 23522732 + 102027859 AGCD01021248;GBDI01227093;XM_005383351;XM_005383352;XM_005383353;XM_005383354;XM_013513528 XP_005383408;XP_005383409;XP_005383410;XP_005383411;XP_013368982 MODEL 8731070 protein-coding Igsf6 immunoglobulin superfamily member 6 ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955493 1109910 1119806 - 102017349 AGCD01060878;GBDK01072125;XM_005405086 XP_005405143 MODEL 10346798 ncrna LOC106149983 uncharacterized LOC106149983 NW_004955459 3077389 3092788 + 106149983 AGCD01048007;XR_001236487 MODEL 8708635 pseudo LOC102017857 40S ribosomal protein S15a pseudogene NW_004955412 16023672 16024171 - 102017857 AGCD01012891;XM_005378627 MODEL 8742225 protein-coding Inpp5b inositol polyphosphate-5-phosphatase B ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); in utero embryonic development (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955452 15628852 15682514 - 102015597 AGCD01044491;AGCD01044492;AGCD01044493;GBBH01016131;XM_005395221;XM_005395223;XM_013519687 XP_005395278;XP_005395280;XP_013375141 MODEL 8893173 protein-coding Epcam epithelial cell adhesion molecule ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955441 14155084 14167584 + 102018032 AGCD01037179;AGCD01037180;AGCD01037181;AGCD01037182;GBCE01007173;GBCQ01011851;XM_013517611 XP_013373065 MODEL 8983988 protein-coding Arfgap3 ARF GTPase activating protein 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN COPI coating of Golgi vesicle (ortholog); presynaptic endocytosis (ortholog); protein secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955413 28058252 28108656 - 102014037 AGCD01014549;AGCD01014550;AGCD01014551;AGCD01014552;GBCE01076485;XM_005379428 XP_005379485 MODEL 8956513 protein-coding Hycc1 hyccin PI4KA lipid kinase complex subunit 1 INVOLVED IN myelination (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); neuron projection (ortholog); plasma membrane (ortholog) NW_004955410 25274360 25342112 - 102010039 AGCD01011150;AGCD01011151;GBDF01086043;XM_005377384;XM_005377387;XM_005377389;XM_013510581 XP_005377441;XP_005377444;XP_005377446;XP_013366035 MODEL 10240238 ncrna LOC106149984 uncharacterized LOC106149984 NW_004955459 8412437 8438840 - 106149984 AGCD01048142;GBDF01207201;XR_001236489 MODEL 8841728 protein-coding Ccl15 C-C motif chemokine ligand 15 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); INVOLVED IN positive regulation of inflammatory response (ortholog); ASSOCIATED WITH calcinosis (ortholog); Experimental Liver Cirrhosis (ortholog); heart valve disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955481 10350128 10352556 - 102024008 AGCD01057143;GBDI01326596;XM_005402901;XM_005402902 XP_005402958;XP_005402959 MODEL 8897080 pseudo LOC102006832 uridine-cytidine kinase 2 pseudogene NW_004955444 56524 61263 - 102006832 AGCD01038648 MODEL 9003686 protein-coding Adgre3 adhesion G protein-coupled receptor E3 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955495 2512391 2565069 - 102029758 AGCD01061781;AGCD01061782;GBBH01189687;XM_005405683;XM_005405684;XM_013505366;XM_013505367 XP_005405740;XP_005405741;XP_013360820;XP_013360821 MODEL 8829744 protein-coding Cnih4 cornichon family member 4 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955520 991477 1006731 - 102007582 AGCD01068039;GBDF01049638;GBDF01049640;XM_005409222 XP_005409279 MODEL 9049862 protein-coding Cers5 ceramide synthase 5 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); oligodendrocyte development (ortholog); sphingolipid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955547 697089 728573 - 102015570 AGCD01072172;AGCD01072173;AGCD01072174;GBCE01052660;XM_005411958 XP_005412015 MODEL 8997016 pseudo LOC102003958 epithelial cell adhesion molecule pseudogene NW_004955413 7190271 7195075 - 102003958 AGCD01013804 MODEL 9042525 protein-coding Acp6 acid phosphatase 6, lysophosphatidic ENCODES a protein that exhibits lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); lysobisphosphatidic acid metabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955568 744453 764402 + 102012696 AGCD01074525;GBDK01361894;XM_005413458;XM_005413459 XP_005413515;XP_005413516 MODEL 39133854 misc_rna 7SK 7SK RNA 8751807 protein-coding Grpel1 GrpE like 1, mitochondrial ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); ATPase activator activity (ortholog); ATPase binding (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); middle cerebral artery infarction (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955514 3459774 3467279 + 102015229 AGCD01067096;GBBH01061487;XM_005408795 XP_005408852 MODEL 8869745 protein-coding Lmo4 LIM domain only 4 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN motor neuron axon guidance (ortholog); negative regulation of protein-containing complex assembly (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH anencephaly (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell leading edge (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955423 6849542 6865928 - 102017889 AGCD01023588;AGCD01023589;GBDJ01075782;GBDK01018084;XM_005385115 XP_005385172 MODEL 8740003 ncrna LOC102011372 uncharacterized LOC102011372 NW_004955445 18244255 18269680 - 102011372 AGCD01039901;GBCQ01003080;XR_001235583;XR_001235584;XR_001235585;XR_001235586;XR_001235587;XR_001235588;XR_001235589;XR_001235590;XR_001235591;XR_001235592 MODEL 8920655 protein-coding Cd53 CD53 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); positive regulation of myoblast fusion (ortholog); receptor clustering (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); FOUND IN anchoring junction (ortholog); cell surface (ortholog); cell-cell junction (ortholog) NW_004955435 14388925 14410543 + 102021169 AGCD01033230;AGCD01033231;GBBH01062410;XM_005388932 XP_005388989 MODEL 9022218 protein-coding Anxa5 annexin A5 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); P-type calcium transporter activity (ortholog); INVOLVED IN cellular response to gonadotropin-releasing hormone (ortholog); cellular response to lead ion (ortholog); negative regulation of blood coagulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN axon terminus (ortholog); cell projection (ortholog); dendrite (ortholog) NW_004955428 18873782 18907955 + 102019417 AGCD01028073;AGCD01028074;GBCC01000191;GBCE01120920;XM_005386786 XP_005386843 MODEL 8905923 protein-coding Igsf8 immunoglobulin superfamily member 8 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of cell migration (ortholog); regulation of cell motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); membrane (ortholog) NW_004955468 11877369 11883962 - 102013814 AGCD01052139;GBDI01182195;XM_005400193 XP_005400250 MODEL 8977314 protein-coding Acp7 acid phosphatase 7, tartrate resistant (putative) ASSOCIATED WITH cervical cancer (ortholog) NW_004955468 432907 452848 - 102028399 AGCD01051698;AGCD01051699;AGCD01051700;AGCD01051701;GBDJ01102501;XM_005399796;XM_005399797;XM_013522275 XP_005399853;XP_005399854;XP_013377729 MODEL 39131950 rrna 5S_rRNA 5S ribosomal RNA 39131783 rrna 5S_rRNA 5S ribosomal RNA 8987629 protein-coding Inpp5d inositol polyphosphate-5-phosphatase D ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-4,5-bisphosphate 5-phosphatase activity (ortholog); inositol-polyphosphate 5-phosphatase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); immunoglobulin mediated immune response (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN erythropoietin signaling pathway; Fc epsilon receptor mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Experimental Liver Cirrhosis (ortholog); Paget's disease of bone (ortholog); FOUND IN actin filament (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955453 2938659 3037211 - 102011272 AGCD01044645;AGCD01044646;AGCD01044647;AGCD01044648;GBDI01180043;XM_005395358;XM_005395359 XP_005395415;XP_005395416 MODEL 9067433 protein-coding Cdkl2 cyclin dependent kinase like 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); craniosynostosis (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955474 1514566 1550120 - 102010152 AGCD01054256;AGCD01054257;AGCD01054258;GBCE01084727;XM_005401320;XM_013502778 XP_005401377;XP_013358232 MODEL 9037414 protein-coding Etv4 ETS variant transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); motor neuron axon guidance (ortholog); negative regulation of mammary gland epithelial cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955451 16965404 16976503 - 102004880 AGCD01043714;AGCD01043715;GBBH01050865;GBBH01050866;XM_013519235;XM_013519236 XP_013374689;XP_013374690 MODEL 8905081 pseudo LOC102010598 60S ribosomal protein L7-like 1 pseudogene NW_004955494 4924654 4934243 - 102010598 AGCD01061515 MODEL 39131633 rrna 5S_rRNA 5S ribosomal RNA 8897503 ncrna LOC102021918 uncharacterized LOC102021918 NW_004955438 17912640 17920107 - 102021918 AGCD01035456;XR_261946 MODEL 39131952 rrna 5S_rRNA 5S ribosomal RNA 8902331 protein-coding Elf1 E74 like ETS transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955404 50952907 51020229 - 102011078 AGCD01004541;AGCD01004542;GBDK01235415;XM_005374217;XM_013516770 XP_005374274;XP_013372224 MODEL 9029836 protein-coding LOC102009805 translation initiation factor IF-2-like NW_004955408 1538854 1542633 - 102009805 AGCD01007963;AGCD01007964;GBCE01168250;XM_013507120 XP_013362574 MODEL 10118807 ncrna LOC106149985 uncharacterized LOC106149985 NW_004955406 17722370 17778855 - 106149985 AGCD01006015;GBDK01363875;XR_001236490 MODEL 9017552 ncrna LOC102008323 uncharacterized LOC102008323 NW_004955421 4100911 4102982 - 102008323 AGCD01021680;GBDF01307160;XR_260787 MODEL 8847357 protein-coding Eef2k eukaryotic elongation factor 2 kinase ENCODES a protein that exhibits calmodulin binding (ortholog); elongation factor-2 kinase activity (ortholog); INVOLVED IN cellular response to anoxia (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955493 865830 922765 + 102014911 AGCD01060868;AGCD01060869;AGCD01060870;AGCD01060871;GBDJ01005099;XM_005405078;XM_005405079;XM_005405080;XM_005405081;XM_005405083;XM_013504852 XP_005405135;XP_005405136;XP_005405137;XP_005405138;XP_005405140;XP_013360306 MODEL 8844232 protein-coding Cops3 COP9 signalosome subunit 3 INVOLVED IN in utero embryonic development (ortholog); positive regulation of keratinocyte differentiation (ortholog); protein deneddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955577 639616 664390 + 102019120 AGCD01075409;GBDF01002804;XM_005413974;XM_005413975 XP_005414031;XP_005414032 MODEL 9040249 pseudo LOC102008670 40S ribosomal protein S13 pseudogene NW_004955441 317788 319866 + 102008670 AGCD01036700 MODEL 8804119 ncrna LOC102005727 uncharacterized LOC102005727 NW_004955424 19528323 19533322 + 102005727 AGCD01024829;GBDI01309346;XR_261083 MODEL 8825298 trna Trnak-uuu transfer RNA lysine (anticodon UUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978826 AGCD01006660;AGCD01022734;AGCD01040255;AGCD01042735;AGCD01050592;AGCD01050596;AGCD01050635;AGCD01051475;AGCD01054570;AGCD01066489;AGCD01066490 MODEL 8755481 pseudo LOC102007178 stress-induced-phosphoprotein 1-like NW_004955404 10266595 10270280 + 102007178 AGCD01003377 MODEL 9001268 protein-coding Abcc6 ATP binding cassette subfamily C member 6 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN ATP metabolic process (ortholog); ATP transport (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Angina Pectoris (ortholog); angioid streaks (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955442 865292 921739 - 102028136 AGCD01037429;AGCD01037430;GBCQ01155383;XM_005391081 XP_005391138 MODEL 8792492 protein-coding LOC102017859 C-type lectin domain family 4 member A-like NW_004955413 5371896 5380676 - 102017859 AGCD01013670;GBCE01108550;XM_005378875 XP_005378932 MODEL 8901591 protein-coding Fezf2 FEZ family zinc finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axonal fasciculation (ortholog); cell dedifferentiation (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); ASSOCIATED WITH Dwarfism (ortholog); epilepsy (ortholog); hypomyelinating leukodystrophy 5 (ortholog) NW_004955517 3439999 3443477 + 102025387 AGCD01067651;XM_005409044 XP_005409101 MODEL 8976350 protein-coding Dlx6 distal-less homeobox 6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); split hand-foot malformation 1 (ortholog); Weissenbacher-Zweymuller syndrome (ortholog) NW_004955432 13415039 13420506 + 102020943 AGCD01031015;AGCD01031016;GBDJ01001146;XM_005388073;XR_001234676 XP_005388130 MODEL 8799736 pseudo LOC102004331 N-formyl peptide receptor 2-like NW_004955558 710555 711378 - 102004331 AGCD01073385 MODEL 8743639 protein-coding Aif1 allograft inflammatory factor 1 ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcohol-Induced Disorders, Nervous System (ortholog); Alzheimer's disease (ortholog); FOUND IN actin filament (ortholog); cell projection (ortholog); cytoplasm (ortholog) NW_004955437 157509 158919 + 102013966 AGCD01034106;GBCE01030227;XM_005389329 XP_005389386 MODEL 9034960 protein-coding Cbx8 chromobox 8 ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); single-stranded RNA binding (ortholog); ubiquitin-protein transferase activator activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); heterochromatin (ortholog) NW_004955506 3035510 3038204 + 102023503 AGCD01065307;GBDF01042358;XM_005407337 XP_005407394 MODEL 8853156 protein-coding Clcn7 Cl-/H+ antiporter 7 INVOLVED IN response to pH (ortholog); transepithelial chloride transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant osteopetrosis 2 (ortholog); autosomal recessive osteopetrosis 4 (ortholog); FOUND IN chloride channel complex (ortholog); lysosomal membrane (ortholog) NW_004955442 15762369 15791635 + 102028022 AGCD01037878;GBDJ01175955;XM_005391549 XP_005391606 MODEL 8844853 ncrna LOC102011816 uncharacterized LOC102011816 NW_004955443 10236461 10240981 - 102011816 AGCD01038372;GBDF01078584;XR_262203 MODEL 8747659 protein-coding LOC102012966 olfactory receptor 13G1 NW_004955418 30326157 30327080 - 102012966 AGCD01019513;XM_005382372 XP_005382429 MODEL 8843904 protein-coding Adgre5 adhesion G protein-coupled receptor E5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955415 33007959 33021896 + 102013716 AGCD01016746;GBDF01088550;XM_005381091;XM_005381093;XM_013512170;XM_013512171;XM_013512172;XM_013512173 XP_005381148;XP_005381150;XP_013367624;XP_013367625;XP_013367626;XP_013367627 MODEL 8740862 protein-coding Kctd7 potassium channel tetramerization domain containing 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN intracellular glutamate homeostasis (ortholog); intracellular potassium ion homeostasis (ortholog); membrane hyperpolarization (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); Cafe-au-Lait Spots (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955456 8627763 8637882 + 102007513 AGCD01046496;GBBH01158498;XM_005396715 XP_005396772 MODEL 8746987 protein-coding Cnksr1 connector enhancer of kinase suppressor of Ras 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; interleukin-3 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog) NW_004955452 5624334 5634861 + 102014107 AGCD01044050;GBDI01118932;XM_005394846;XM_005394847;XM_013519665 XP_005394903;XP_005394904;XP_013375119 MODEL 9057896 protein-coding LOC102009418 uncharacterized LOC102009418 NW_004955528 214625 215535 - 102009418 AGCD01069515;XM_005410049 XP_005410106 MODEL 9015159 protein-coding LOC102011373 zinc finger protein 664-like NW_004955569 341373 356350 + 102011373 AGCD01074574;AGCD01074575;XM_005413508 XP_005413565 MODEL 8971403 protein-coding Avpi1 arginine vasopressin induced 1 INVOLVED IN positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Lung Neoplasms (ortholog); uterine carcinosarcoma (ortholog) NW_004955507 3760228 3768320 - 102029770 AGCD01065635;GBDK01423207;XM_005407619;XM_013506192 XP_005407676;XP_013361646 MODEL 9041247 protein-coding Camkk1 calcium/calmodulin dependent protein kinase kinase 1 ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); positive regulation of protein kinase activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955467 12973667 13002098 + 102017321 AGCD01051661;GBBH01198888;XM_005399704;XM_013522156;XM_013522157;XM_013522158 XP_005399761;XP_013377610;XP_013377611;XP_013377612 MODEL 8767644 ncrna LOC102005728 uncharacterized LOC102005728 NW_004955424 27059476 27098465 + 102005728 AGCD01025100;GBDF01207365;XR_261110;XR_261111 MODEL 8926926 protein-coding Ghrl ghrelin and obestatin prepropeptide ENCODES a protein that exhibits ghrelin receptor binding (ortholog); growth hormone-releasing hormone activity (ortholog); hormone activity (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); adult feeding behavior (ortholog); decidualization (ortholog); PARTICIPATES IN ghrelin system pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); bone resorption disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955561 1676475 1682205 - 102018995 AGCD01073861;GBDK01306493;XM_005413069;XM_013509094 XP_005413126;XP_013364548 MODEL 39131784 rrna 5S_rRNA 5S ribosomal RNA 9001694 protein-coding Amigo3 adhesion molecule with Ig like domain 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN heterophilic cell-cell adhesion (ortholog); negative regulation of neuron projection development (ortholog); nervous system development (ortholog); ASSOCIATED WITH Optic Nerve Injuries (ortholog); sciatic neuropathy (ortholog); Spinal Cord Compression (ortholog) NW_004955532 1618659 1621706 - 102015887 AGCD01070196;GBDF01281705;XM_005410208 XP_005410265 MODEL 9067337 protein-coding LOC102006113 beta-galactosidase-1-like protein 3 NW_004955412 35224061 35251279 + 102006113 AGCD01013407;GBDF01102556;XM_013510984 XP_013366438 MODEL 8919542 protein-coding Cers6 ceramide synthase 6 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); oligodendrocyte development (ortholog); positive regulation of oligodendrocyte apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955449 5636678 5920377 - 102005863 AGCD01041942;AGCD01041943;AGCD01041944;AGCD01041945;AGCD01041946;GBDK01357017;XM_005393276;XM_013518781 XP_005393333;XP_013374235 MODEL 39133855 misc_rna 7SK 7SK RNA 39133982 misc_rna 7SK 7SK RNA 9046475 pseudo LOC102003959 ESF1 homolog pseudogene NW_004955413 20383463 20386134 - 102003959 AGCD01014215 MODEL 39131953 rrna 5S_rRNA 5S ribosomal RNA 8830548 protein-coding C1qtnf4 C1q and TNF related 4 INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); gene expression (ortholog); inflammatory response (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 705165 709261 + 102006787 AGCD01022431;AGCD01022432;GBCE01179740;GBDK01218895;XM_013514050 XP_013369504 MODEL 8802281 protein-coding Elf2 E74 like ETS transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955428 4458962 4550783 + 102020823 AGCD01027693;AGCD01027694;AGCD01027695;GBDI01140584;XM_005386699;XM_005386701;XM_005386702;XM_005386703;XM_013515278;XM_013515279;XM_013515280;XM_013515281;XM_013515282;XM_013515283;XM_013515284;XM_013515285;XM_013515286 XP_005386756;XP_005386758;XP_005386759;XP_005386760;XP_013370732;XP_013370733;XP_013370734;XP_013370735;XP_013370736;XP_013370737;XP_013370738;XP_013370739;XP_013370740 MODEL 8857889 protein-coding Grpel2 GrpE like 2, mitochondrial ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); INVOLVED IN protein import into mitochondrial matrix (ortholog); regulation of cardiolipin metabolic process (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955853 1443 9278 + 102019557 AGCD01078493;GBBH01131678;GBCE01113023;XM_005415136 XP_005415193 MODEL 10381707 ncrna LOC106149986 uncharacterized LOC106149986 NW_004955459 15441364 15449019 - 106149986 AGCD01048322;GBDF01248965;XR_001236491;XR_001236492 MODEL 8900337 protein-coding Lmo7 LIM domain 7 ENCODES a protein that exhibits actinin binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical plasma membrane (ortholog) NW_004955404 31197156 31388571 - 102020628 AGCD01004017;AGCD01004018;GBCQ01064193;GBDF01082235;XM_005374167;XM_005374168;XM_005374169;XM_013516543;XM_013516544;XM_013516549;XM_013516551;XM_013516553;XM_013516561;XM_013516563;XM_013516566;XM_013516569;XM_013516572 XP_005374224;XP_005374225;XP_005374226;XP_013371997;XP_013371998;XP_013372003;XP_013372005;XP_013372007;XP_013372015;XP_013372017;XP_013372020;XP_013372023;XP_013372026 MODEL 39133983 misc_rna 7SK 7SK RNA 8885401 protein-coding LOC102004692 olfactory receptor 51I1 NW_004955414 21341220 21342158 - 102004692 AGCD01015415;XM_005380084 XP_005380141 MODEL 8718208 protein-coding Cd55 CD55 molecule (Cromer blood group) ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); lipid binding (ortholog); virus receptor activity (ortholog); INVOLVED IN maternal process involved in parturition (ortholog); negative regulation of complement activation (ortholog); positive regulation of CD4-positive, alpha-beta T cell activation (ortholog); PARTICIPATES IN complement system pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); breast cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955406 42773368 42796205 + 102030273 AGCD01006718;AGCD01006719;GBCE01002757;GBCQ01070157;XM_013502893;XM_013502896;XM_013502897;XM_013502899;XM_013502901;XM_013502903 XP_013358347;XP_013358350;XP_013358351;XP_013358353;XP_013358355;XP_013358357 MODEL 8709757 protein-coding Arfgef1 ARF guanine nucleotide exchange factor 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); myosin binding (ortholog); INVOLVED IN endomembrane system organization (ortholog); glycoprotein biosynthetic process (ortholog); Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); apraxia (ortholog); astigmatism (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955444 11986595 12110172 + 102008357 AGCD01039059;AGCD01039060;GBCQ01064317;GBDF01053271;XM_005392122 XP_005392179 MODEL 8757363 protein-coding Acr acrosin ENCODES a protein that exhibits amidase activity (ortholog); D-mannose binding (ortholog); fucose binding (ortholog); INVOLVED IN acrosome matrix dispersal (ortholog); acrosome reaction (ortholog); activation of adenylate cyclase activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); spermatogenic failure 87 (ortholog); FOUND IN acrosomal vesicle (ortholog); Golgi-associated vesicle (ortholog); protein-containing complex (ortholog) NW_004955413 33721984 33728088 + 102009368 AGCD01014688;GBDJ01305187;XM_005379598 XP_005379655 MODEL 9017805 protein-coding Ccl16 C-C motif chemokine ligand 16 ENCODES a protein that exhibits chemoattractant activity (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog) NW_004955481 10332022 10334781 - 102023034 AGCD01057142;GBDI01141085;XM_005415289 XP_005415346 MODEL 8705851 protein-coding Igsf9 immunoglobulin superfamily member 9 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); INVOLVED IN dendrite development (ortholog); homophilic cell-cell adhesion (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955468 11722716 11741622 - 102011298 AGCD01052137;GBDF01166084;XM_005400184;XM_005400186;XM_005400187 XP_005400241;XP_005400243;XP_005400244 MODEL 9033711 protein-coding LOC102007180 60S ribosomal protein L31 NW_004955404 47061481 47061923 + 102007180 AGCD01004474;XM_005374211 XP_005374268 MODEL 39131358 protein-coding CHMP5 charged multivesicular body protein 5 8971443 ncrna LOC102004333 uncharacterized LOC102004333 NW_004955559 1812453 1815477 - 102004333 AGCD01073670;GBDK01430414;XR_265003 MODEL 39131634 rrna 5S_rRNA 5S ribosomal RNA 9016772 protein-coding Cldn1 claudin 1 ENCODES a protein that exhibits identical protein binding (ortholog); virus receptor activity (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); calcium-independent cell-cell adhesion (ortholog); cell junction maintenance (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); atopic dermatitis (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955420 17798974 17815049 + 102016058 AGCD01021031;GBCE01004289;GBDI01009318;XM_005383227 XP_005383284 MODEL 8964248 protein-coding Aif1l allograft inflammatory factor 1 like ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); focal adhesion (ortholog) NW_004955513 936889 954667 + 102018519 AGCD01066837;GBCQ01004723;XM_005408351;XM_005408353 XP_005408408;XP_005408410 MODEL 9051278 protein-coding LOC102011817 40S ribosomal protein S27-like NW_004955444 12300883 12301137 - 102011817 AGCD01039067;XM_005392136 XP_005392193 MODEL 9006846 protein-coding Kansl2 KAT8 regulatory NSL complex subunit 2 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); histone acetyltransferase complex (ortholog); mitochondrion (ortholog) NW_004955500 7552747 7572991 - 102030649 AGCD01063932;AGCD01063933;GBBH01089932;GBCQ01099796;XM_013505716 XP_013361170 MODEL 8765517 protein-coding Etv5 ETS variant transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); locomotory behavior (ortholog); male germ-line stem cell asymmetric division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955420 21503820 21576539 + 102008001 AGCD01021138;AGCD01021139;AGCD01021140;AGCD01021141;GBDF01249226;XM_013513339 XP_013368793 MODEL 8861586 protein-coding Cdkl3 cyclin dependent kinase like 3 INVOLVED IN dendrite extension (ortholog); negative regulation of axon extension (ortholog); positive regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955408 5466943 5552572 - 102015080 AGCD01008138;AGCD01008139;AGCD01008140;AGCD01008141;GBDK01036333;XM_005376149;XM_013508493;XM_013508498;XM_013508502;XM_013508506;XM_013508512;XM_013508516 XP_005376206;XP_013363947;XP_013363952;XP_013363956;XP_013363960;XP_013363966;XP_013363970 MODEL 8727444 protein-coding Ammecr1 AMMECR nuclear protein 1 ASSOCIATED WITH Dwarfism (ortholog); melanoma (ortholog); midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955490 5538445 5657959 + 102008632 AGCD01060205;AGCD01060206;AGCD01060207;GBDI01339138;XM_005404657 XP_005404714 MODEL 8699945 protein-coding LOC102021923 malonyl-CoA decarboxylase, mitochondrial NW_004955564 281274 328682 - 102021923 AGCD01074195;AGCD01074196;AGCD01074197;AGCD01074198;GBDI01256173;XM_005413231;XM_005413232;XM_005413233;XM_005413234;XM_005413235;XM_005413236;XM_013509208 XP_005413288;XP_005413289;XP_005413290;XP_005413291;XP_005413292;XP_005413293;XP_013364662 MODEL 8728640 protein-coding Eef2kmt eukaryotic elongation factor 2 lysine methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine trimethylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955442 12467077 12475902 + 102026804 AGCD01037736;GBBH01209835;XM_005391251 XP_005391308 MODEL 8780747 protein-coding LOC102008677 deoxynucleotidyltransferase terminal-interacting protein 2-like NW_004955572 1393253 1395378 - 102008677 AGCD01074950;XM_013509439 XP_013364893 MODEL 9018476 trna Trnal-aag transfer RNA leucine (anticodon AAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955493;NW_004955465;NW_004955550;NW_004955550 931996;13766471;1486047;1410172 932077;13766552;1486128;1410253 +;-;-;+ 101978790 AGCD01050622;AGCD01060872;AGCD01072566;AGCD01072577 MODEL 8822073 pseudo LOC102017862 olfactory receptor 502-like NW_004955414 23701731 23702443 - 102017862 AGCD01015518 MODEL 8849161 protein-coding Anxa6 annexin A6 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); cholesterol binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); calcium ion transport (ortholog); mitochondrial calcium ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN apical plasma membrane (ortholog); intercalated disc (ortholog); late endosome membrane (ortholog) NW_004955408 2522027 2565862 + 102017306 AGCD01008011;AGCD01008012;AGCD01008013;AGCD01008014;GBCB01006018;GBDI01016338;XM_013508182 XP_013363636 MODEL 8896472 protein-coding LOC102011379 histone H2B type 1-B-like NW_004955581 88920 89732 + 102011379 AGCD01075657;XM_005414228 XP_005414285 MODEL 8920557 protein-coding Ffar1 free fatty acid receptor 1 ENCODES a protein that exhibits bioactive lipid receptor activity (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); insulin secretion (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 4626567 4627683 + 102018075 AGCD01051918;XM_005400050 XP_005400107 MODEL 8910937 protein-coding Hycc2 hyccin PI4KA lipid kinase complex subunit 2 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); Weight Gain (ortholog); FOUND IN cell junction (ortholog) NW_004955403 483671 564509 + 102025420 AGCD01001693;AGCD01001694;AGCD01001695;AGCD01001696;GBBH01118959;XM_005373218;XM_005373219;XM_005373220;XM_005373221;XM_005373222;XM_005373223;XM_005373224;XM_005373225;XM_005373226;XM_005373227 XP_005373275;XP_005373276;XP_005373277;XP_005373278;XP_005373279;XP_005373280;XP_005373281;XP_005373282;XP_005373283;XP_005373284 MODEL 8769532 protein-coding Inpp5e inositol polyphosphate-5-phosphatase E ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); negative regulation of protein localization to cilium (ortholog); PARTICIPATES IN phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Ciliary Motility Disorders (ortholog); cleft palate (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955513 4304483 4313087 + 102006700 AGCD01066925;GBDF01049179;XM_005408490 XP_005408547 MODEL 8765714 pseudo LOC102010601 28S ribosomal protein S36, mitochondrial pseudogene NW_004955497 1775669 1783185 - 102010601 AGCD01062473 MODEL 10343503 protein-coding Ccl17 C-C motif chemokine ligand 17 ENCODES a protein that exhibits CCR4 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); negative regulation of myoblast differentiation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic bronchopulmonary aspergillosis (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955433 15052616 15054732 + 106146250 AGCD01031745;GBDI01261696;XM_013516202 XP_013371656 MODEL 8748204 protein-coding LOC102009806 inner nuclear membrane protein Man1 NW_004955458 11884435 11954683 + 102009806 AGCD01047763;AGCD01047764;GBBH01024965;GBCE01008629;XM_013520993 XP_013376447 MODEL 39131635 rrna 5S_rRNA 5S ribosomal RNA 39131956 rrna 5S_rRNA 5S ribosomal RNA 9024632 protein-coding Cops4 COP9 signalosome subunit 4 INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955474 6540022 6581881 - 102030414 AGCD01054481;AGCD01054482;GBCE01096177;XM_005401387;XM_013502770 XP_005401444;XP_013358224 MODEL 8874529 protein-coding Adgrf1 adhesion G protein-coupled receptor F1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cAMP (ortholog); memory (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955437 11744387 11772260 - 102011043 AGCD01034581;AGCD01034582;GBCQ01041145;XM_005389875;XM_013517104;XM_013517105;XM_013517106;XM_013517107 XP_005389932;XP_013372558;XP_013372559;XP_013372560;XP_013372561 MODEL 8943772 protein-coding Cnksr2 connector enhancer of kinase suppressor of Ras 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); postsynapse organization (ortholog); postsynaptic specialization organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN extrinsic component of postsynaptic density membrane (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955509 1758803 1977776 + 102022521 AGCD01065977;AGCD01065978;AGCD01065979;AGCD01065980;AGCD01065981;AGCD01065982;AGCD01065983;AGCD01065984;AGCD01065985;GBDI01278437;XM_013506287 XP_013361741 MODEL 9062199 ncrna LOC102008678 uncharacterized LOC102008678 NW_004955449 1311463 1320185 + 102008678 AGCD01041795;AGCD01041796;GBCB01051011;XR_001235820;XR_001235821;XR_262484 MODEL 9012268 protein-coding Ghsr growth hormone secretagogue receptor ENCODES a protein that exhibits coreceptor activity (ortholog); G protein-coupled receptor activity (ortholog); growth hormone secretagogue receptor activity (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); adult feeding behavior (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ghrelin system pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic disease (ortholog); astigmatism (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); membrane raft (ortholog) NW_004955420 2483173 2486414 - 102029402 AGCD01020597;XM_005383008 XP_005383065 MODEL 39131785 rrna 5S_rRNA 5S ribosomal RNA 8884829 protein-coding Camkk2 calcium/calmodulin dependent protein kinase kinase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); CAMKK-AMPK signaling cascade (ortholog); positive regulation of autophagy of mitochondrion (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955482 7000010 7029623 + 102018094 AGCD01057435;GBDI01290549;XM_005403133;XM_005403135;XM_005403136;XM_013503675;XM_013503676;XM_013503677 XP_005403190;XP_005403192;XP_005403193;XP_013359129;XP_013359130;XP_013359131 MODEL 8836021 protein-coding LOC102006115 C-type lectin domain family 7 member A-like NW_004955413 7254513 7276098 - 102006115 AGCD01013806;AGCD01013807;AGCD01013808;GBBH01168364;XM_005378930 XP_005378987 MODEL 39133856 misc_rna 7SK 7SK RNA 8813455 protein-coding Aifm1 apoptosis inducing factor mitochondria associated 1 ENCODES a protein that exhibits DNA binding (ortholog); FAD binding (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to aldosterone (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial inner membrane (ortholog) NW_004955473 4891955 4925705 + 102008718 AGCD01053962;GBDF01250246;XM_005401243;XM_005401244 XP_005401300;XP_005401301 MODEL 8905022 pseudo LOC102009420 proteasome assembly chaperone 2 pseudogene NW_004955536 716838 717352 + 102009420 AGCD01070737 MODEL 8898993 protein-coding Kctd8 potassium channel tetramerization domain containing 8 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); INVOLVED IN regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN postsynapse (ortholog); presynaptic active zone membrane (ortholog); presynaptic membrane (ortholog) NW_004955443 3605845 3836717 + 102006620 AGCD01038197;AGCD01038198;AGCD01038199;AGCD01038200;AGCD01038201;AGCD01038202;GBDJ01115972;XM_005391914 XP_005391971 MODEL 9005810 protein-coding Cldn10 claudin 10 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955404 14483217 14597912 - 102023974 AGCD01003509;AGCD01003510;AGCD01003511;AGCD01003512;AGCD01003513;AGCD01003514;AGCD01003515;AGCD01003516;GBBH01139843;XM_005374102;XM_005374103 XP_005374159;XP_005374160 MODEL 8921689 protein-coding Abcc8 ATP binding cassette subfamily C member 8 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to nutrient levels (ortholog); female pregnancy (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; altered insulin secretion pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); brain edema (ortholog); Brain Injuries (ortholog); FOUND IN inward rectifying potassium channel (ortholog); plasma membrane (ortholog); presynaptic membrane (ortholog) NW_004955414 32216243 32289028 - 102010794 AGCD01015777;GBDI01053758;XM_005380385;XM_005380386;XM_013512092;XM_013512093 XP_005380442;XP_005380443;XP_013367546;XP_013367547 MODEL 8807737 protein-coding Cby1 chibby 1, beta catenin antagonist ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cilium assembly (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); high grade glioma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955413 24781102 24794537 + 102021544 AGCD01014379;GBBH01092384;XM_005379264;XM_005379265;XM_005379266;XR_260106 XP_005379321;XP_005379322;XP_005379323 MODEL 10121486 ncrna LOC106149987 uncharacterized LOC106149987 NW_004955459 11592159 11647074 + 106149987 AGCD01048233;GBDF01277077;XR_001236494 MODEL 8981785 protein-coding Dmac1 distal membrane arm assembly component 1 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955434 11530632 11539237 - 102014280 AGCD01032379;AGCD01032380;GBBH01140816;XM_005388752 XP_005388809 MODEL 9053400 protein-coding Avpr1a arginine vasopressin receptor 1A ENCODES a protein that exhibits peptide hormone binding (ortholog); V1A vasopressin receptor binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to water deprivation (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 1; ASSOCIATED WITH acute kidney failure (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); plasma membrane (ortholog) NW_004955458 10245325 10253209 - 102007518 AGCD01047677;GBDF01125391;GBDJ01409936;XM_013520787 XP_013376241 MODEL 8819788 protein-coding Lmod1 leiomodin 1 INVOLVED IN actin nucleation (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); endometriosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin filament (ortholog); myofibril (ortholog); sarcomere (ortholog) NW_004955406 37967098 38012908 - 102019980 AGCD01006581;AGCD01006582;GBDF01014788;XM_005375196 XP_005375253 MODEL 8936851 pseudo LOC102005731 UPF0711 protein C18orf21 pseudogene NW_004955426 5300983 5301585 + 102005731 AGCD01026120 MODEL 8908392 pseudo LOC102011382 ubiquitin carboxyl-terminal hydrolase 1 pseudogene NW_004955402 52962185 52963700 + 102011382 AGCD01001352 MODEL 8957407 pseudo LOC102017864 selenoprotein K-like NW_004955415 7938080 7938777 - 102017864 AGCD01016059 MODEL 9053486 protein-coding LOC102012969 uncharacterized LOC102012969 NW_004955486 114376 172776 - 102012969 AGCD01058804;AGCD01058805;AGCD01058806;AGCD01058807;AGCD01058808;AGCD01058809;AGCD01058810;AGCD01058811;AGCD01058812;AGCD01058813;AGCD01058814;AGCD01058815;AGCD01058816;GBDF01153096;XM_013504134 XP_013359588 MODEL 9058529 ncrna LOC102008325 uncharacterized LOC102008325 NW_004955491 2918171 2920095 + 102008325 AGCD01060390;GBDF01117852;XR_264034 MODEL 8764475 protein-coding Chmp6 charged multivesicular body protein 6 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); late endosome to lysosome transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); endosome membrane (ortholog) NW_004955506 1987710 1994731 - 102016177 AGCD01065286;AGCD01065287;GBCB01022811;XM_005407316 XP_005407373 MODEL 8781949 protein-coding LOC102007188 torsin-1A-interacting protein 2 NW_004955406 19092006 19122814 - 102007188 AGCD01006074;GBBH01032401;XM_005374979;XM_005374980;XM_005374981;XM_013521267;XM_013521272;XM_013521279;XM_013521287 XP_005375036;XP_005375037;XP_005375038;XP_013376721;XP_013376726;XP_013376733;XP_013376741 MODEL 8850923 protein-coding Ffar3 free fatty acid receptor 3 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to fatty acid (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH essential hypertension (ortholog); urinary bladder cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955468 4627686 4634499 + 102018377 AGCD01051918;AGCD01051919;XM_005400051 XP_005400108 MODEL 39131786 rrna 5S_rRNA 5S ribosomal RNA 8942469 protein-coding Cert1 ceramide transporter 1 ENCODES a protein that exhibits ceramide binding (ortholog); ceramide transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell population proliferation (ortholog); ceramide metabolic process (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 34 (ortholog); epilepsy (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955425 25228216 25355597 + 102024359 AGCD01025911;AGCD01025912;AGCD01025913;AGCD01025914;AGCD01025915;GBCB01056994;GBDF01155103;XM_013514795;XM_013514796 XP_013370249;XP_013370250 MODEL 8845469 pseudo LOC102010608 RWD domain-containing protein 1 pseudogene NW_004955429 4973092 4973820 - 102010608 AGCD01028499 MODEL 8854801 protein-coding Ccl19 C-C motif chemokine ligand 19 ENCODES a protein that exhibits CCR chemokine receptor binding (ortholog); CCR10 chemokine receptor binding (ortholog); CCR7 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); CCL19-activated CCR7 signaling pathway (ortholog); cell maturation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); allergic disease (ortholog); aspergillosis (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955472 1444598 1446488 + 102019796 AGCD01053393;GBCE01155917;XM_005401043 XP_005401100 MODEL 8838219 ncrna LOC102011818 uncharacterized LOC102011818 NW_004955567 1491834 1498408 + 102011818 AGCD01074476;GBDK01309694;XR_001232411;XR_001232412 MODEL 8995558 protein-coding C1qtnf5 C1q and TNF related 5 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor inhibitor activity (ortholog); INVOLVED IN inner ear development (ortholog); protein secretion (ortholog); ASSOCIATED WITH isolated microphthalmia 5 (ortholog); late-onset retinal degeneration (ortholog); lens disease (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); extracellular region (ortholog) NW_004955412 20419754 20421541 - 102006558 AGCD01013008;GBDI01171673;XM_005378334 XP_005378391 MODEL 8830870 ncrna LOC102021929 uncharacterized LOC102021929 NW_004955597 320901 337898 + 102021929 AGCD01076554;GBDF01041765;XR_001232548 MODEL 8917504 protein-coding Cdkl4 cyclin dependent kinase like 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955441 6802669 6842378 - 102015053 AGCD01036943;AGCD01036944;AGCD01036945;GBCQ01099131;XM_005390903;XM_013517583;XM_013517584;XM_013517585;XM_013517586 XP_005390960;XP_013373037;XP_013373038;XP_013373039;XP_013373040 MODEL 8875947 protein-coding Elf3 E74 like ETS transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); blastocyst development (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH biliary tract benign neoplasm (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 38126633 38131292 + 102021843 AGCD01006594;GBCQ01003498;XM_005375202;XM_013522296 XP_005375259;XP_013377750 MODEL 8937498 protein-coding Grpr gastrin releasing peptide receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); neuropeptide binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); learning or memory (ortholog); motor behavior (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Memory Disorders (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955519 2032500 2063292 - 102009412 AGCD01067913;AGCD01067914;XM_005409151 XP_005409208 MODEL 8995308 protein-coding Eefsec eukaryotic elongation factor, selenocysteine-tRNA specific ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN selenium compound metabolic process (ortholog); selenocysteine incorporation (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); head and neck squamous cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); ribonucleoprotein complex (ortholog) NW_004955429 15381257 15598355 - 102026029 AGCD01028805;AGCD01028806;AGCD01028807;AGCD01028808;AGCD01028809;AGCD01028810;GBCQ01066156;XM_005387043;XM_005387044 XP_005387100;XP_005387101 MODEL 8817522 protein-coding Kctd9 potassium channel tetramerization domain containing 9 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell maturation (ortholog); gene expression (ortholog); natural killer cell degranulation (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955403 48349349 48373903 - 102024523 AGCD01002917;AGCD01002918;GBDF01157051;XM_005373718;XM_013514111 XP_005373775;XP_013369565 MODEL 39134253 misc_rna 7SK 7SK RNA 8790989 trna Trnal-caa transfer RNA leucine (anticodon CAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465;NW_004955418;NW_004955465;NW_004955465 13283889;29926451;13908819;13888432 13283993;29926556;13908923;13888537 -;+;+;- 101978789 AGCD01019491;AGCD01050597;AGCD01050633;AGCD01050634 MODEL 8953517 protein-coding Cops5 COP9 signalosome subunit 5 ENCODES a protein that exhibits enzyme binding (ortholog); macrophage migration inhibitory factor binding (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN exosomal secretion (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955444 12217337 12233570 + 102008673 AGCD01039063;AGCD01039064;GBDF01003538;XM_005392123;XM_005392125 XP_005392180;XP_005392182 MODEL 8869965 protein-coding Acrbp acrosin binding protein INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); extracellular region (ortholog) NW_004955413 4251608 4262095 - 102024780 AGCD01013604;GBCQ01012794;XM_005378808 XP_005378865 MODEL 8712239 protein-coding Cd59 CD59 molecule (CD59 blood group) ENCODES a protein that exhibits complement binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of activation of membrane attack complex (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute necrotizing pancreatitis (ortholog); alcohol-associated liver disease (ortholog); FOUND IN cell surface (ortholog); compact myelin (ortholog); external side of plasma membrane (ortholog) NW_004955422 12500572 12528738 + 102020811 AGCD01022796;GBDF01046537;XM_005384156 XP_005384213 MODEL 9053022 protein-coding Anxa7 annexin A7 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN autophagy (ortholog); cell population proliferation (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN alveolar lamellar body (ortholog); chromaffin granule membrane (ortholog); cytosol (ortholog) NW_004955437 18394371 18421779 + 102018767 AGCD01034790;AGCD01034791;GBDI01027399;XM_005389980;XM_013516762;XM_013516763 XP_005390037;XP_013372216;XP_013372217 MODEL 9065333 protein-coding Cnksr3 CNKSR family member 3 INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of peptidyl-serine phosphorylation (ortholog); positive regulation of sodium ion transmembrane transporter activity (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955439 7524401 7616447 + 102022963 AGCD01035771;AGCD01035772;GBCQ01100251;GBDF01249438;XM_005390557 XP_005390614 MODEL 8887681 protein-coding Arfgef2 ARF guanine nucleotide exchange factor 2 ENCODES a protein that exhibits GABA receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); myosin binding (ortholog); INVOLVED IN endomembrane system organization (ortholog); endosome organization (ortholog); exocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Cognitive Dysfunction (ortholog); FOUND IN asymmetric synapse (ortholog); axonemal microtubule (ortholog); cytoplasmic vesicle (ortholog) NW_004955445 9069803 9153746 - 102008272 AGCD01039623;AGCD01039624;GBBH01065316;XM_005392338;XM_005392340 XP_005392395;XP_005392397 MODEL 8780512 protein-coding Igsf9b immunoglobulin superfamily member 9B ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); positive regulation of inhibitory postsynaptic potential (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); inhibitory synapse (ortholog) NW_004955412 34712556 34828013 - 102027734 AGCD01013391;AGCD01013392;GBBH01149995;XM_005378583;XM_013511161;XM_013511162 XP_005378640;XP_013366615;XP_013366616 MODEL 9016484 pseudo LOC102004334 zona pellucida sperm-binding protein 2 pseudogene NW_004955443 8434034 8436392 - 102004334 AGCD01038326 MODEL 8893591 protein-coding Hydin HYDIN axonemal central pair apparatus protein INVOLVED IN axonemal central apparatus assembly (ortholog); brain development (ortholog); cilium movement (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN axonemal central apparatus (ortholog); axonemal central pair projection (ortholog); cilium (ortholog) NW_004955484 3567896 3948807 - 102007343 AGCD01058183;AGCD01058184;AGCD01058185;AGCD01058186;AGCD01058187;AGCD01058188;AGCD01058189;AGCD01058190;AGCD01058191;AGCD01058192;AGCD01058193;AGCD01058194;AGCD01058195;AGCD01058196;AGCD01058197;GBCE01141557;XM_013503969;XM_013503970;XM_013503971;XM_013503972 XP_013359423;XP_013359424;XP_013359425;XP_013359426 MODEL 8719849 protein-coding LOC102009819 splicing factor, arginine/serine-rich 19-like NW_004955413 3207197 3209122 - 102009819 AGCD01013568;GBDI01085078;XM_005378751;XM_005378752;XM_013511272;XR_001232932 XP_005378808;XP_005378809;XP_013366726 MODEL 39131636 rrna 5S_rRNA 5S ribosomal RNA 8747132 protein-coding Ammecr1l AMMECR1 like ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog) NW_004955459 2654361 2678080 + 102020428 AGCD01047994;GBDF01120756;XM_005397568;XM_005397570;XM_005397572 XP_005397625;XP_005397627;XP_005397629 MODEL 8876928 protein-coding LOC102004693 olfactory receptor 6 NW_004955414 22664983 22665967 - 102004693 AGCD01015469;GBBH01083993;XM_013511766 XP_013367220 MODEL 9055027 pseudo LOC102011820 kelch repeat and BTB domain-containing protein 2 pseudogene NW_004955446 5926616 5937581 - 102011820 AGCD01040081 MODEL 39131637 rrna 5S_rRNA 5S ribosomal RNA 8928099 protein-coding Epcip exosomal polycystin 1 interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); sarcoma (ortholog); FOUND IN extracellular exosome (ortholog); migrasome (ortholog); vesicle (ortholog) NW_004955407 32229108 32249097 - 102017952 AGCD01007671;GBDJ01114206;XM_005375674 XP_005375731 MODEL 9041652 pseudo LOC102008680 wiskott-Aldrich syndrome protein family member 1 pseudogene NW_004955403 9508735 9510324 + 102008680 AGCD01001908 MODEL 8879707 protein-coding Dmac2 distal membrane arm assembly component 2 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Mesothelioma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955555 362287 370276 - 102018992 AGCD01073024;AGCD01073025;GBDJ01091232;XM_005412352;XM_013508782 XP_005412409;XP_013364236 MODEL 8993927 protein-coding Gid4 GID complex subunit 4 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN ubiquitin ligase complex (ortholog) NW_004955478 11223083 11242986 - 102004384 AGCD01056164;GBCQ01067338;GBDF01004608;XM_013503218 XP_013358672 MODEL 8780887 protein-coding Lmod2 leiomodin 2 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin nucleation (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); dilated cardiomyopathy 2G (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); cardiac myofibril (ortholog); M band (ortholog) NW_004955479 5143430 5151096 + 102015197 AGCD01056340;GBCB01034433;XM_005402335 XP_005402392 MODEL 8936266 protein-coding LOC102010612 olfactory receptor 10AG1-like NW_004955511 892359 900459 - 102010612 AGCD01066346;XM_005408216 XP_005408273 MODEL 9038028 protein-coding LOC102003961 olfactory receptor 51I1-like NW_004955414 20943623 20944567 + 102003961 AGCD01015396;XM_005380488 XP_005380545 MODEL 9056124 protein-coding Camkmt calmodulin-lysine N-methyltransferase ENCODES a protein that exhibits calmodulin-lysine N-methyltransferase activity (ortholog); heat shock protein binding (ortholog); INVOLVED IN mitochondrion organization (ortholog); peptidyl-lysine methylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleolus (ortholog) NW_004955441 11453939 11830893 + 102003909 AGCD01037109;AGCD01037110;AGCD01037111;AGCD01037112;AGCD01037113;AGCD01037114;GBDF01156800;XM_005390947;XM_005390948;XM_005390949;XM_005390950 XP_005391004;XP_005391005;XP_005391006;XP_005391007 MODEL 8846350 pseudo LOC102007193 keratin-associated protein 12-1-like NW_004955407 41612826 41613140 + 102007193 AGCD01007872 MODEL 8881448 protein-coding Chmp7 charged multivesicular body protein 7 INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); exit from mitosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); chromatin (ortholog) NW_004955403 46467463 46478897 + 102017294 AGCD01002859;AGCD01002860;GBDF01152869;XM_005373696 XP_005373753 MODEL 8884763 protein-coding Etv6 ETS variant transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); hematopoietic stem cell proliferation (ortholog); mesenchymal cell apoptotic process (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog) NW_004955413 8698412 8912011 + 102012300 AGCD01013886;AGCD01013887;GBDI01290570;GBDJ01030940;XM_013511474 XP_013366928 MODEL 8743583 ncrna LOC102010609 uncharacterized LOC102010609 NW_004955508 2826273 2855521 + 102010609 AGCD01065798;GBBH01228727;XR_001231644 MODEL 39133857 misc_rna 7SK 7SK RNA 9062891 protein-coding Ccl20 C-C motif chemokine ligand 20 ENCODES a protein that exhibits CCR6 chemokine receptor binding (ortholog); chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); calcium-mediated signaling (ortholog); cell chemotaxis (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN extracellular region (ortholog) NW_004955453 6846625 6850007 - 102007187 AGCD01044732;GBDK01358667;XM_005395441;XM_013519756 XP_005395498;XP_013375210 MODEL 8710071 protein-coding Ces3 carboxylesterase 3 ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog) NW_004955484 9602861 9620025 - 102018731 AGCD01058422;AGCD01058423;AGCD01058424;GBCQ01152279;XM_005403709 XP_005403766 MODEL 9061525 protein-coding Adgrf2 adhesion G protein-coupled receptor F2 INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); gene expression (ortholog); ASSOCIATED WITH autistic disorder (ortholog) NW_004955437 12104938 12126649 + 102012684 AGCD01034597;AGCD01034598;GBCC01011063;XM_005389877 XP_005389934 MODEL 8802328 protein-coding Cldn11 claudin 11 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axon ensheathment (ortholog); cell adhesion (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); clear cell renal cell carcinoma (ortholog); hypomyelinating leukodystrophy 22 (ortholog); FOUND IN axon (ortholog); basal part of cell (ortholog); bicellular tight junction (ortholog) NW_004955420 580588 595052 + 102021130 AGCD01020550;GBDF01002100;XM_005382982 XP_005383039 MODEL 8884522 protein-coding Abcc9 ATP binding cassette subfamily C member 9 ENCODES a protein that exhibits ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN action potential (ortholog); ATP metabolic process (ortholog); blood circulation (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Ambras type hypertrichosis universalis congenita (ortholog); Apnea (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); inward rectifying potassium channel (ortholog) NW_004955413 17385966 17510220 - 102019791 AGCD01014150;AGCD01014151;AGCD01014152;AGCD01014153;AGCD01014154;AGCD01014155;AGCD01014156;GBDI01325169;XM_005379069;XM_013511594;XM_013511595;XM_013511596;XM_013511597;XM_013511598;XM_013511599;XM_013511600;XM_013511601;XM_013511602;XM_013511603 XP_005379126;XP_013367048;XP_013367049;XP_013367050;XP_013367051;XP_013367052;XP_013367053;XP_013367054;XP_013367055;XP_013367056;XP_013367057 MODEL 10384267 ncrna LOC106149988 uncharacterized LOC106149988 NW_004955459 8729835 8753453 + 106149988 AGCD01048145;GBDJ01118067;XR_001236496 MODEL 9007267 protein-coding Avpr1b arginine vasopressin receptor 1B ENCODES a protein that exhibits identical protein binding (ortholog); peptide hormone binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); intracellular pH reduction (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN dendrite (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955406 41706088 41716173 - 102016976 AGCD01006688;AGCD01006689;GBDF01306643;XM_005375385;XM_013523068 XP_005375442;XP_013378522 MODEL 39132511 rrna 5S_rRNA 5S ribosomal RNA 8772776 protein-coding Acrv1 acrosomal vesicle protein 1 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955412 26654980 26664989 - 102023570 AGCD01013204;AGCD01013205;GBDF01010364;XM_013510946;XM_013510947;XM_013510948 XP_013366400;XP_013366401;XP_013366402 MODEL 8798418 protein-coding Inpp5f inositol polyphosphate-5-phosphatase F ENCODES a protein that exhibits inositol monophosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axon (ortholog); clathrin-coated endocytic vesicle (ortholog); clathrin-coated pit (ortholog) NW_004955551 634724 641266 + 102012133 AGCD01072666;GBCQ01070019;XM_005412166 XP_005412223 MODEL 9018083 ncrna LOC102012970 uncharacterized LOC102012970 NW_004955420 29437923 29445279 + 102012970 AGCD01021502;GBDJ01336190;XR_001233709;XR_001233710 MODEL 8802173 protein-coding Anxa9 annexin A9 ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); phosphatidylserine binding (ortholog); phospholipid binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); lateral plasma membrane (ortholog) NW_004955588 352175 374723 + 102016003 AGCD01076106;AGCD01076107;AGCD01076108;GBCQ01039606;XM_005414458;XM_013509917;XM_013509918;XM_013509919;XM_013509920 XP_005414515;XP_013365371;XP_013365372;XP_013365373;XP_013365374 MODEL 8757681 protein-coding Kansl3 KAT8 regulatory NSL complex subunit 3 INVOLVED IN regulation of mitochondrial transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN histone acetyltransferase complex (ortholog); mitochondrion (ortholog); NSL complex (ortholog) NW_004955470 3976094 4036656 - 102020651 AGCD01052713;AGCD01052714;AGCD01052715;GBDK01433306;XM_005400676;XM_005400679;XM_013522713;XM_013522714;XM_013522715;XM_013522716;XM_013522717;XM_013522718;XM_013522719;XM_013522721;XM_013522722;XR_001237009;XR_001237010 XP_005400733;XP_005400736;XP_013378167;XP_013378168;XP_013378169;XP_013378170;XP_013378171;XP_013378172;XP_013378173;XP_013378175;XP_013378176 MODEL 8982864 pseudo LOC102006116 28S ribosomal protein S36, mitochondrial pseudogene NW_004955413 12416468 12416769 - 102006116 AGCD01013988 MODEL 8749377 protein-coding Ihh Indian hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); morphogen activity (ortholog); patched binding (ortholog); INVOLVED IN bone resorption (ortholog); branching involved in blood vessel morphogenesis (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acrocapitofemoral dysplasia (ortholog); acromesomelic dysplasia, Maroteaux type (ortholog); annular pancreas (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955453 14376665 14382536 + 102024084 AGCD01044864;GBCQ01087658;XM_005395596 XP_005395653 MODEL 8726040 ncrna LOC102008328 uncharacterized LOC102008328 NW_004955423 11498337 11509824 - 102008328 AGCD01023701;GBDF01306799;XR_260965;XR_260966 MODEL 8825130 protein-coding Epdr1 ependymin related 1 ENCODES a protein that exhibits ganglioside GM1 binding (ortholog); identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN myofibroblast contraction (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); lysosomal lumen (ortholog); lysosome (ortholog) NW_004955460 5612589 5650222 - 102025881 AGCD01048455;AGCD01048456;GBDJ01134723;XM_005397745;XM_005397746 XP_005397802;XP_005397803 MODEL 8773776 protein-coding Ffar4 free fatty acid receptor 4 ENCODES a protein that exhibits arrestin family protein binding (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cilium (ortholog); endocytic vesicle (ortholog); endosome membrane (ortholog) NW_004955507 81910 110047 + 102028663 AGCD01065461;AGCD01065462;GBDK01117139;XM_005407515 XP_005407572 MODEL 8983057 protein-coding Cby2 chibby family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955518 3395464 3410616 + 102015978 AGCD01067802;GBDF01014802;XM_005409088;XM_005409090 XP_005409145;XP_005409147 MODEL 8918593 ncrna LOC102021930 uncharacterized LOC102021930 NW_004955403 4854568 4862986 + 102021930 AGCD01001799;GBDF01251789;XR_259151 MODEL 8979794 protein-coding LOC102009822 TRIO and F-actin-binding protein NW_004955413 24125506 24147260 + 102009822 AGCD01014348;AGCD01014349;GBDI01083298;GBDK01078508;XM_005379226 XP_005379283 MODEL 8839034 protein-coding Amn amnion associated transmembrane protein ENCODES a protein that exhibits cargo receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); cobalamin transport (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); anemia (ortholog); diarrhea (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955538 2017476 2021890 + 102015146 AGCD01071094;AGCD01071095;GBCQ01008311;GBDF01250836;XM_005410890 XP_005410947 MODEL 9019222 trna Trnal-cag transfer RNA leucine (anticodon CAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955433;NW_004955433;NW_004955462 363663;14941261;14940923;14719898 363745;14941343;14941005;14719980 -;-;+;+ 101978793 AGCD01031735;AGCD01049456;AGCD01057606 MODEL 8972170 pseudo LOC102005734 deoxynucleotidyltransferase terminal-interacting protein 2 pseudogene NW_004955428 1136198 1138064 + 102005734 AGCD01027605 MODEL 8780925 protein-coding Ces4a carboxylesterase 4A ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955484 9583684 9601285 - 102018190 AGCD01058422;GBDK01149180;XM_005403707 XP_005403764 MODEL 8916341 protein-coding Cd5l CD5 molecule like INVOLVED IN positive regulation of complement-dependent cytotoxicity (ortholog); regulation of complement activation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955468 9670958 9690331 - 102019793 AGCD01052052;AGCD01052053;GBDF01075765;XM_005400134 XP_005400191 MODEL 8976046 protein-coding Cnmd chondromodulin INVOLVED IN endothelial cell morphogenesis (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); sarcoma (ortholog) NW_004955404 50864017 50889249 + 102009907 AGCD01004539;AGCD01004540;GBCE01085053;XM_005374214;XM_005374215 XP_005374271;XP_005374272 MODEL 8952571 protein-coding Cops6 COP9 signalosome subunit 6 INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955573 770271 775222 - 102028245 AGCD01075004;GBBH01035107;XM_005413743;XM_005413744 XP_005413800;XP_005413801 MODEL 8872240 protein-coding Arfgef3 ARFGEF family member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955436 21220743 21366477 - 102018131 AGCD01034050;AGCD01034051;GBBH01150141;GBDF01075891;XM_013516654 XP_013372108 MODEL 8792398 protein-coding C1qtnf6 C1q and TNF related 6 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog); myocardial infarction (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); protein-containing complex (ortholog) NW_004955413 23661788 23669793 - 102008523 AGCD01014333;GBDK01025155;XM_013511301 XP_013366755 MODEL 8750915 pseudo LOC102004336 olfactory receptor 7G1-like NW_004955563 207086 223744 + 102004336 AGCD01074053 MODEL 8831533 protein-coding Gid8 GID complex subunit 8 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955528 1146313 1153093 - 102020705 AGCD01069552;GBDF01051218;XM_005410002;XM_005410003;XM_013507475 XP_005410059;XP_005410060;XP_013362929 MODEL 8816567 pseudo LOC102010616 60S ribosomal protein L28 pseudogene NW_004955516 3854520 3859651 - 102010616 AGCD01067515 MODEL 8836844 protein-coding LOC102009424 keratin, type II cytoskeletal 5-like NW_004955547 2759440 2771836 - 102009424 AGCD01072294;XM_005411942 XP_005411999 MODEL 8815055 protein-coding Lmod3 leiomodin 3 ENCODES a protein that exhibits actin monomer binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN actin nucleation (ortholog); positive regulation of skeletal muscle fiber development (ortholog); skeletal muscle fiber development (ortholog); ASSOCIATED WITH genetic disease (ortholog); nemaline myopathy 10 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); M band (ortholog) NW_004955421 18728993 18744326 + 102011670 AGCD01022052;AGCD01022053;GBCB01006122;XM_005383807;XM_005383808 XP_005383864;XP_005383865 MODEL 8926699 protein-coding Elf4 E74 like ETS transcription factor 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN natural killer cell proliferation (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of interleukin-1 beta production (ortholog); ASSOCIATED WITH autistic disorder (ortholog); AUTOINFLAMMATORY SYNDROME, FAMILIAL, X-LINKED, BEHCET-LIKE 2 (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); PML body (ortholog) NW_004955473 4934770 4986283 + 102010053 AGCD01053962;AGCD01053963;GBCQ01031364;XM_005401248;XM_005401249;XM_013523065;XM_013523066;XM_013523067 XP_005401305;XP_005401306;XP_013378519;XP_013378520;XP_013378521 MODEL 8766851 protein-coding Iho1 interactor of HORMAD1 1 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955532 1198316 1226875 + 102007590 AGCD01070171;AGCD01070172;AGCD01070173;GBDF01126604;GBDF01126605;XM_013507565 XP_013363019 MODEL 8970638 protein-coding LOC102003963 platelet basic protein-like NW_004955474 308503 310298 + 102003963 AGCD01054213;GBCQ01144875;XM_005401302 XP_005401359 MODEL 8790776 protein-coding Grsf1 G-rich RNA sequence binding factor 1 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); morphogenesis of embryonic epithelium (ortholog); positive regulation of mitochondrial RNA catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955447 2181841 2194650 + 102022138 AGCD01040535;GBBH01060226;GBCB01002036;XM_005392775 XP_005392832 MODEL 9005530 protein-coding LOC102010611 olfactory receptor 1013-like NW_004955511 1796248 1797165 + 102010611 AGCD01066380;XM_005407977 XP_005408034 MODEL 39134254 misc_rna 7SK 7SK RNA 8893712 protein-coding Cdkl5 cyclin dependent kinase like 5 ENCODES a protein that exhibits ATP binding (ortholog); kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); neuron migration (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Angelman syndrome (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) NW_004955586 791886 997713 - 102008365 AGCD01076045;AGCD01076046;AGCD01076047;AGCD01076048;AGCD01076049;GBCE01021075;XM_005414442;XM_005414443;XM_013509894;XM_013509896;XM_013509897;XM_013509898 XP_005414499;XP_005414500;XP_013365348;XP_013365350;XP_013365351;XP_013365352 MODEL 8952261 ncrna LOC102017871 uncharacterized LOC102017871 NW_004955416 29852903 29861728 + 102017871 AGCD01017668;GBDF01099351;XR_001233381;XR_260437 MODEL 8944008 protein-coding Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 ENCODES a protein that exhibits ER lumen protein retrieval receptor activity (ortholog); INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); T cell apoptotic process (ortholog); T cell differentiation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955559 2080085 2087579 + 102011057 AGCD01073691;GBDJ01021309;XM_005412955 XP_005413012 MODEL 8723570 protein-coding Ccl21 C-C motif chemokine ligand 21 ENCODES a protein that exhibits CCR7 chemokine receptor binding (ortholog); chemokine activity (ortholog); chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); CCL21-activated CCR7 signaling pathway (ortholog); cell chemotaxis (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog); pulmonary fibrosis (ortholog); rheumatoid arthritis (ortholog) NW_004955472 1427660 1428771 + 102019495 AGCD01053390;GBCE01007174;XM_005401042 XP_005401099 MODEL 39131638 rrna 5S_rRNA 5S ribosomal RNA 8717189 protein-coding LOC102008682 plakophilin-2-like NW_004956130 12 5617 + 102008682 AGCD01079104;GBDK01128349;GBDK01128352;XM_005415169 XP_005415226 MODEL 39131787 rrna 5S_rRNA 5S ribosomal RNA 8753175 protein-coding Dmac2l distal membrane arm assembly component 2 like ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); stomach cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 12473891 12485066 - 102024312 AGCD01009549;GBCB01056134;XM_005376828;XM_005376829;XM_013510335 XP_005376885;XP_005376886;XP_013365789 MODEL 8987695 pseudo LOC102012971 spermine synthase pseudogene NW_004955422 11371620 11373194 + 102012971 AGCD01022755 MODEL 9056887 protein-coding Hyi hydroxypyruvate isomerase (putative) NW_004955537 3017860 3020642 - 102027112 AGCD01070940;GBDK01140725;XM_005410655;XM_013507750 XP_005410712;XP_013363204 MODEL 8939253 protein-coding Aoah acyloxyacyl hydrolase ENCODES a protein that exhibits acyloxyacyl hydrolase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); lipopolysaccharide catabolic process (ortholog); lipopolysaccharide metabolic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular region (ortholog) NW_004955460 6750851 6954185 + 102029597 AGCD01048477;GBBH01082803;XM_013521273;XM_013521274;XM_013521275;XM_013521276 XP_013376727;XP_013376728;XP_013376729;XP_013376730 MODEL 8909410 protein-coding Chn1 chimerin 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); motor neuron axon guidance (ortholog); regulation of axonogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); Breast Cancer, Familial (ortholog) NW_004955449 574407 635566 + 102003921 AGCD01041770;AGCD01041771;AY533210;XM_005393180;XM_013518798;XM_013518799 AAS59413;XP_005393237;XP_013374252;XP_013374253 MODEL 9043935 protein-coding Eva1a eva-1 homolog A, regulator of programmed cell death INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); cardiac left ventricle morphogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955424 10308586 10358477 + 102016071 AGCD01024511;AGCD01024512;GBCE01133628;XM_005385464;XM_005385465;XM_005385466;XM_005385467;XM_005385470;XM_005385471;XM_013514721;XM_013514722 XP_005385521;XP_005385522;XP_005385523;XP_005385524;XP_005385527;XP_005385528;XP_013370175;XP_013370176 MODEL 9065247 protein-coding Eeig1 estrogen-induced osteoclastogenesis regulator 1 INVOLVED IN positive regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); nucleus (ortholog) NW_004955419 707850 738763 + 102020669 AGCD01019607;AGCD01019608;GBDI01000094;GBDJ01174614;XM_005382390 XP_005382447 MODEL 8750727 protein-coding LOC102021933 protein asunder homolog NW_004956483 1036 3435 + 102021933 AGCD01079671;GBCC01016012;XM_013510229 XP_013365683 MODEL 9058377 pseudo LOC102004694 tubulin alpha chain-like NW_004955470 11493665 11502589 + 102004694 AGCD01052889 MODEL 8796778 protein-coding Adgrf3 adhesion G protein-coupled receptor F3 ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955469 8280131 8291512 - 102010987 AGCD01052460;AGCD01052461;XM_013522571 XP_013378025 MODEL 15036851 trna Trnal-gag transfer RNA leucine (anticodon GAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978791 8861967 protein-coding Amn1 antagonist of mitotic exit network 1 homolog ASSOCIATED WITH lung squamous cell carcinoma (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN microvillus membrane (ortholog) NW_004955505 3840570 3897720 - 102029095 AGCD01065060;AGCD01065061;AGCD01065062;AGCD01065063;AGCD01065064;AGCD01065065;AGCD01065066;GBCE01186433;GBDF01010691;XM_013505959 XP_013361413 MODEL 39132513 rrna 5S_rRNA 5S ribosomal RNA 8884616 protein-coding Acsbg1 acyl-CoA synthetase bubblegum family member 1 ENCODES a protein that exhibits long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN long-chain fatty acid biosynthetic process (ortholog); long-chain fatty acid metabolic process (ortholog); ovarian follicle atresia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenoleukodystrophy (ortholog); demyelinating disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955450 703874 744782 - 102008164 AGCD01042343;GBDF01052909;XM_005393441;XM_013518893;XM_013518894 XP_005393498;XP_013374347;XP_013374348 MODEL 8735699 pseudo LOC102008330 guanine nucleotide-binding protein G(k) subunit alpha pseudogene NW_004955497 3650046 3651027 - 102008330 AGCD01062552 MODEL 9063580 ncrna LOC102005050 uncharacterized LOC102005050 NW_004955488 8461648 8536710 - 102005050 AGCD01059713;AGCD01059714;AGCD01059715;AGCD01059716;AGCD01059717;AGCD01059718;GBDF01148383;XR_001231164 MODEL 39131788 rrna 5S_rRNA 5S ribosomal RNA 9038917 pseudo LOC102007194 metal-response element-binding transcription factor 2-like NW_004955407 20859491 20861983 - 102007194 AGCD01007345 MODEL 8879791 protein-coding Camkv CaM kinase like vesicle associated ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of modification of postsynaptic structure (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955532 1747359 1762978 - 102020839 AGCD01070200;GBDF01238148;XM_005410227;XM_005410228;XM_005410229;XM_005410230;XM_013507615 XP_005410284;XP_005410285;XP_005410286;XP_005410287;XP_013363069 MODEL 10252126 protein-coding LOC106147052 janus kinase and microtubule-interacting protein 2-like NW_004955514 4087297 4102789 + 106147052 AGCD01067127;XM_013506748 XP_013362202 MODEL 8950289 protein-coding Cldn12 claudin 12 INVOLVED IN tight junction assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cell periphery (ortholog); lateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955432 7632382 7640024 + 102022527 AGCD01030853;GBDF01035196;XM_005387993 XP_005388050 MODEL 8969387 ncrna LOC102009425 uncharacterized LOC102009425 NW_004955549 824578 919142 - 102009425 AGCD01072431;GBCE01065742;XR_001232253;XR_001232254;XR_001232255;XR_001232256;XR_001232257;XR_264914 MODEL 8785691 protein-coding Hykk hydroxylysine kinase ENCODES a protein that exhibits hydroxylysine kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955450 900783 918873 + 102010433 AGCD01042345;GBDI01280889;XM_005393449;XM_005393450;XM_013518985 XP_005393506;XP_005393507;XP_013374439 MODEL 8825473 protein-coding Cc2d1a coiled-coil and C2 domain containing 1A ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN apical dendrite arborization (ortholog); dendrite arborization (ortholog); endosome organization (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 3 (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome membrane (ortholog) NW_004955415 32667832 32682945 + 102006908 AGCD01016730;GBDF01085117;XM_005381071;XM_005381072;XM_013512196 XP_005381128;XP_005381129;XP_013367650 MODEL 8707244 protein-coding Gigyf1 GRB10 interacting GYF protein 1 INVOLVED IN insulin-like growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955573 228926 240425 + 102014624 AGCD01074969;GBDF01192387;XM_005413696;XM_005413697;XM_005413698 XP_005413753;XP_005413754;XP_005413755 MODEL 9044597 protein-coding Abcd1 ATP binding cassette subfamily D member 1 ENCODES a protein that exhibits ABC-type fatty-acyl-CoA transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); fatty acid biosynthetic process (ortholog); fatty acid elongation (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Adrenal Insufficiency (ortholog); adrenoleukodystrophy (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) NW_004955580 459715 475363 + 102016330 AGCD01075607;GBCQ01126666;XM_005414142;XM_013509678 XP_005414199;XP_013365132 MODEL 10296320 ncrna LOC106149989 uncharacterized LOC106149989 NW_004955460 8061251 8065462 - 106149989 AGCD01048512;GBCB01056225;XR_001236500;XR_001236501 MODEL 8893898 protein-coding Elf5 E74 like ETS transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN ectoderm development (ortholog); ectodermal cell fate commitment (ortholog); mammary gland epithelial cell differentiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 11751073 11779313 + 102016484 AGCD01022765;GBBH01077250;XM_005384141;XM_005384142;XM_005384143 XP_005384198;XP_005384199;XP_005384200 MODEL 8882072 protein-coding Grtp1 growth hormone regulated TBC protein 1 ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955404 532866 555366 + 102013684 AGCD01003203;GBCB01109383;GBCE01117673;XM_005374221 XP_005374278 MODEL 8720634 protein-coding Avpr2 arginine vasopressin receptor 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of urine volume (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH cardiomyopathy (ortholog); congenital adrenal hyperplasia (ortholog); congestive heart failure (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955580 583827 586739 + 102021498 AGCD01075613;GBCQ01038848;XM_005414164;XM_005414165;XM_005414166;XM_005414167;XM_013509695;XM_013509696;XM_013509697;XM_013509698;XM_013509699;XM_013509700 XP_005414221;XP_005414222;XP_005414223;XP_005414224;XP_013365149;XP_013365150;XP_013365151;XP_013365152;XP_013365153;XP_013365154 MODEL 8864639 protein-coding Eva1b eva-1 homolog B NW_004955452 14296607 14298331 - 102004667 AGCD01044463;GBDK01020136;XM_013519505 XP_013374959 MODEL 8918654 protein-coding Ccl22 C-C motif chemokine ligand 22 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); monocyte chemotaxis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anti-basement membrane glomerulonephritis (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog) NW_004955433 15002001 15007324 + 102025388 AGCD01031743;GBDF01023639;XM_005388385 XP_005388442 MODEL 9039333 protein-coding Cnn1 calponin 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN negative regulation of vascular associated smooth muscle cell proliferation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoskeleton (ortholog) NW_004955495 2394724 2401236 + 102026336 AGCD01061770;GBDF01280626;XM_005405673 XP_005405730 MODEL 39131639 rrna 5S_rRNA 5S ribosomal RNA 8830329 protein-coding Cdkn1a cyclin dependent kinase inhibitor 1A ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to amino acid starvation (ortholog); cellular response to cell-matrix adhesion (ortholog); PARTICIPATES IN G1/S transition pathway; Notch signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); Acute Experimental Pancreatitis (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 6254638 6261278 - 102027675 AGCD01034425;AGCD01034426;GBDJ01088492;XM_005389647 XP_005389704 MODEL 8966816 protein-coding Kars1 lysyl-tRNA synthetase 1 ENCODES a protein that exhibits amino acid binding (ortholog); ATP binding (ortholog); ATP:ADP adenylyltransferase activity (ortholog); INVOLVED IN basophil activation involved in immune response (ortholog); diadenosine tetraphosphate biosynthetic process (ortholog); ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 89 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955484 1924523 1939777 + 102017340 AGCD01058073;GBDF01000398;XM_005403435;XM_005403436 XP_005403492;XP_005403493 MODEL 8905082 protein-coding Ces5a carboxylesterase 5A ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lymphoma (ortholog) NW_004955433 13715780 13745580 - 102011035 AGCD01031698;AGCD01031699;AGCD01031700;GBDF01131660;XM_013516107 XP_013371561 MODEL 8918878 ncrna LOC102008684 uncharacterized LOC102008684 NW_004955403 54070872 54077075 - 102008684 AGCD01003087;GBDJ01213136;XR_001234164;XR_001234165;XR_001234166;XR_001234167;XR_001234168;XR_001234169;XR_001234171;XR_001234172;XR_001234173 MODEL 8778956 trna Trnal-uaa transfer RNA leucine (anticodon UAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465;NW_004955436;NW_004955465 13142581;16282643;13312190 13142663;16282725;13312272 -;-;- 101978788 AGCD01033911;AGCD01050590;AGCD01050597 MODEL 8855293 protein-coding Fga fibrinogen alpha chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); structural molecule activity (ortholog); INVOLVED IN acute-phase response (ortholog); blood coagulation (ortholog); blood coagulation, common pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8806964 8814671 + 102008617 AGCD01053195;GBDF01130962;XM_005400932 XP_005400989 MODEL 9032833 ncrna LOC102004338 uncharacterized LOC102004338 NW_004955569 1198723 1215199 - 102004338 AGCD01074644;GBDF01080568;XR_001232427;XR_265045 MODEL 9010362 pseudo LOC102010625 coiled-coil domain-containing protein 126 pseudogene NW_004955526 455881 456356 + 102010625 AGCD01069233 MODEL 8965336 protein-coding LOC102012974 ubiquinol-cytochrome-c reductase complex assembly factor 1 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN Cbp3p-Cbp6 complex (ortholog); cytoplasmic vesicle (ortholog); mitochondrial inner membrane (ortholog) NW_004955422 26009078 26096300 + 102012974 AGCD01023273;AGCD01023274;AGCD01023275;GBDF01119443;XM_005384797 XP_005384854 MODEL 8874101 protein-coding Lmtk2 lemur tyrosine kinase 2 ENCODES a protein that exhibits myosin VI binding (ortholog); protein phosphatase inhibitor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); peptidyl-serine phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); growth cone (ortholog) NW_004955460 14012047 14101969 + 102026951 AGCD01048736;AGCD01048737;AGCD01048738;GBDF01089102;XM_005397908;XM_005397909 XP_005397965;XP_005397966 MODEL 8895400 ncrna LOC102009847 uncharacterized LOC102009847 NW_004955487 8288681 8301499 - 102009847 AGCD01059432;AGCD01059433;GBDF01084799;XR_263988 MODEL 9040166 pseudo LOC102003968 striatin-3-like NW_004955483 708746 721428 - 102003968 AGCD01057628 MODEL 8725640 pseudo LOC102017874 eukaryotic translation initiation factor 4E type 2 pseudogene NW_004955481 6307199 6311302 - 102017874 AGCD01057023 MODEL 9066623 protein-coding Cd6 CD6 molecule ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); lipoteichoic acid binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); heterophilic cell-cell adhesion (ortholog); immunological synapse formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); multiple sclerosis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); immunological synapse (ortholog) NW_004955511 5592176 5617421 + 102019831 AGCD01066572;AGCD01066573;GBDI01000697;GBDI01000713;XM_013506456 XP_013361910 MODEL 8802783 pseudo LOC102005735 L-lactate dehydrogenase A-like 6B NW_004955507 6103959 6105265 - 102005735 AGCD01065696 MODEL 8829320 protein-coding Epg5 ectopic P-granules 5 autophagy tethering factor INVOLVED IN anatomical structure homeostasis (ortholog); apoptotic process (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN lysosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955402 31422848 31532189 - 102025742 AGCD01000788;AGCD01000789;AGCD01000790;GBDF01280540;XM_005372862;XM_013510404 XP_005372919;XP_013365858 MODEL 8867073 ncrna LOC102006117 uncharacterized LOC102006117 NW_004955468 6251392 6252627 - 102006117 AGCD01051983;GBDF01085640;XR_263393 MODEL 8786033 protein-coding Cops7a COP9 signalosome subunit 7A INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Disease Progression (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955413 4337117 4343640 + 102027284 AGCD01013609;GBCQ01034243;XM_005378818;XM_005378819;XM_005378820;XM_005378821;XM_005378822;XM_013511342 XP_005378875;XP_005378876;XP_005378877;XP_005378878;XP_005378879;XP_013366796 MODEL 8992758 protein-coding Elfn1 extracellular leucine rich repeat and fibronectin type III domain containing 1 INVOLVED IN chemical synaptic transmission (ortholog); establishment of protein localization (ortholog); synapse assembly (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); developmental and epileptic encephalopathy (ortholog); epilepsy (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); dendrite (ortholog) NW_004955460 9250522 9305895 + 102021212 AGCD01048542;AGCD01048543;GBDJ01337944;XM_005397815;XM_005397816;XM_013521103 XP_005397872;XP_005397873;XP_013376557 MODEL 8773277 protein-coding Dmap1 DNA methyltransferase 1 associated protein 1 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of protein import into nucleus (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cognitive Dysfunction (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NuA4 histone acetyltransferase complex (ortholog) NW_004955464 13984748 13993411 - 102018699 AGCD01050298;GBCQ01093703;XM_005398766 XP_005398823 MODEL 39131640 rrna 5S_rRNA 5S ribosomal RNA 9016964 protein-coding Amot angiomotin ENCODES a protein that exhibits angiostatin binding (ortholog); identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel endothelial cell migration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); cervical cancer (ortholog); FOUND IN actin filament (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) NW_004955490 2965899 3042541 + 102028425 AGCD01060156;GBCQ01015232;XM_005404628;XM_013504539;XM_013504540;XM_013504541;XM_013504542 XP_005404685;XP_013359993;XP_013359994;XP_013359995;XP_013359996 MODEL 9021221 protein-coding LOC102011821 putative olfactory receptor 2B8 NW_004955576 1362244 1363185 + 102011821 AGCD01075374;XM_005413954 XP_005414011 MODEL 8728929 ncrna LOC102009823 uncharacterized LOC102009823 NW_004955468 7108012 7122808 + 102009823 AGCD01051995;AGCD01051996;GBDF01128606;XR_001236944;XR_001236945;XR_263399;XR_263400;XR_263401 MODEL 9026733 protein-coding Ik IK cytokine ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); mitotic spindle pole (ortholog); nuclear chromosome (ortholog) NW_004955418 39695 52862 - 102028750 AGCD01018664;AGCD01018665;GBBH01033048;XM_005382016 XP_005382073 MODEL 8811747 protein-coding Aoc1 amine oxidase copper containing 1 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); diamine oxidase activity (ortholog); INVOLVED IN putrescine metabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN bicellular tight junction (ortholog); extracellular exosome (ortholog); extracellular region (ortholog) NW_004955491 5316482 5326262 + 102026986 AGCD01060477;AGCD01060478;GBCQ01033148;XM_005404798;XM_013504575 XP_005404855;XP_013360029 MODEL 39134255 misc_rna 7SK 7SK RNA 39131352 protein-coding CHN1 chimerin 1 8923639 protein-coding LOC102021936 Ig-like V-type domain-containing protein FAM187A NW_004955451 17693409 17695551 + 102021936 AGCD01043767;GBCE01037287;XM_005394557 XP_005394614 MODEL 8876498 protein-coding Cldn14 claudin 14 ASSOCIATED WITH Acidoses (ortholog); autosomal recessive nonsyndromic deafness 29 (ortholog); Deafness (ortholog); FOUND IN bicellular tight junction (ortholog); plasma membrane (ortholog) NW_004955407 35641560 35728105 - 102010550 AGCD01007750;GBDI01155906;XM_005375735;XM_005375736 XP_005375792;XP_005375793 MODEL 8952517 protein-coding Hyls1 HYLS1 centriolar and ciliogenesis associated ASSOCIATED WITH hydrolethalus syndrome 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 26937460 26949571 + 102025103 AGCD01013224;GBDF01043493;XM_005378474;XM_005378475;XM_005378476;XM_005378477;XM_005378478;XM_005378479;XM_013511232 XP_005378531;XP_005378532;XP_005378533;XP_005378534;XP_005378535;XP_005378536;XP_013366686 MODEL 8895668 protein-coding Adgrf4 adhesion G protein-coupled receptor F4 INVOLVED IN erythrocyte development (ortholog); gene expression (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); schizophrenia (ortholog) NW_004955437 12127365 12147227 + 102013005 AGCD01034598;GBCC01026570;XM_005389878;XM_013516712 XP_005389935;XP_013372166 MODEL 8978036 protein-coding Arfip1 ARF interacting protein 1 ENCODES a protein that exhibits phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); negative regulation of retrograde transport, endosome to Golgi (ortholog); regulation of protein secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955471 7238456 7349767 + 102027064 AGCD01053143;AGCD01053144;AGCD01053145;AGCD01053146;GBBH01141131;XM_005400902;XM_005400903;XM_005400905;XM_005400906 XP_005400959;XP_005400960;XP_005400962;XP_005400963 MODEL 39131539 protein-coding C1QTNF6 C1q and TNF related 6 8735654 protein-coding Ccl24 C-C motif chemokine ligand 24 ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); chemotaxis (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955456 14582812 14588574 - 102005566 AGCD01046645;GBCE01108374;XM_013520511 XP_013375965 MODEL 8791739 pseudo LOC102008331 cytoplasmic dynein 1 intermediate chain 2 pseudogene NW_004955500 4123771 4125723 + 102008331 AGCD01063770 MODEL 8993614 protein-coding Cdkn1b cyclin dependent kinase inhibitor 1B ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein kinase regulator activity (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN autophagic cell death (ortholog); cellular response to antibiotic (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN forkhead class A signaling pathway; G1/S transition pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); Brain Injuries (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955413 9615542 9620542 + 102018818 AGCD01013908;GBDI01121227;HM069343;XM_005378971 ADI23935;XP_005379028 MODEL 8958571 protein-coding Cnn2 calponin 2 INVOLVED IN cellular response to mechanical stimulus (ortholog); hemopoiesis (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN stress fiber (ortholog) NW_004955495 6839436 6848208 - 102014797 AGCD01062097;GBCE01003484;XM_005406004;XM_005406006 XP_005406061;XP_005406063 MODEL 8780048 protein-coding Acsf2 acyl-CoA synthetase family member 2 ENCODES a protein that exhibits medium-chain fatty acid-CoA ligase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 11276385 11306873 - 102013369 AGCD01043345;AGCD01043346;AGCD01043347;AGCD01043348;GBBH01126803;XM_005394171;XM_013519093;XM_013519094 XP_005394228;XP_013374547;XP_013374548 MODEL 8929852 protein-coding Camlg calcium modulating ligand ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIz (ortholog); myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955408 29968962 29977896 + 102005674 AGCD01008791;GBDF01089234;XM_005376462 XP_005376519 MODEL 8861210 protein-coding Eeig2 EEIG family member 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955435 12061112 12126310 + 102025163 AGCD01033133;AGCD01033134;GBBH01218671;XM_005389101 XP_005389158 MODEL 9029785 pseudo LOC102004696 V-type proton ATPase subunit F pseudogene NW_004955414 25610808 25611315 + 102004696 AGCD01015615;XM_005380431 MODEL 9059248 ncrna LOC102009427 uncharacterized LOC102009427 NW_004955442 18649285 18656714 - 102009427 AGCD01038012;GBDF01055895;XR_262168 MODEL 9017736 protein-coding Cc2d1b coiled-coil and C2 domain containing 1B ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); nucleoplasm (ortholog) NW_004955464 6792456 6805284 + 102019151 AGCD01050039;GBDK01002298;XM_013521614;XM_013521615;XM_013521616;XM_013521617 XP_013377068;XP_013377069;XP_013377070;XP_013377071 MODEL 8836832 protein-coding Fgb fibrinogen beta chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein-folding chaperone binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH cardiovascular system disease (ortholog); carotid artery disease (ortholog); cerebral cavernous malformation (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8824901 8832836 - 102009374 AGCD01053196;GBCB01021502;XM_005400935 XP_005400992 MODEL 8944614 protein-coding Gigyf2 GRB10 interacting GYF protein 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); proline-rich region binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); feeding behavior (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955453 3201593 3301541 - 102013580 AGCD01044654;GBCB01041020;XM_013519902 XP_013375356 MODEL 8744411 pseudo LOC102017875 high mobility group protein B1 pseudogene NW_004955418 4498538 4499208 + 102017875 AGCD01018825 MODEL 10351448 pseudo LOC106149990 cytokine receptor common subunit gamma pseudogene NW_004955460 13238976 13239916 + 106149990 AGCD01048676 MODEL 8718050 protein-coding Awat1 acyl-CoA wax alcohol acyltransferase 1 ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); pancreatic adenocarcinoma (ortholog) NW_004955475 9780080 9785675 + 102021337 AGCD01055075;GBCE01147851;XM_005401614 XP_005401671 MODEL 39132515 rrna 5S_rRNA 5S ribosomal RNA 8924514 protein-coding Grwd1 glutamate rich WD repeat containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA replication origin binding (ortholog); histone binding (ortholog); INVOLVED IN DNA replication (ortholog); nucleosome assembly (ortholog); nucleosome disassembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955559 2033743 2039493 - 102010741 AGCD01073687;GBDJ01072112;XM_005412954 XP_005413011 MODEL 8734097 protein-coding Epgn epithelial mitogen ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955474 564329 573014 + 102006240 AGCD01054223;XM_005401311;XM_013502765;XM_013502766 XP_005401368;XP_013358219;XP_013358220 MODEL 8896589 protein-coding Eva1c eva-1 homolog C ENCODES a protein that exhibits heparin binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955407 31934954 32043827 + 102016021 AGCD01007663;AGCD01007664;AGCD01007665;AGCD01007666;AGCD01007667;AGCD01007668;GBCE01085482;XM_005375667;XM_005375668;XM_005375669;XM_013504147;XM_013504151;XM_013504153 XP_005375724;XP_005375725;XP_005375726;XP_013359601;XP_013359605;XP_013359607 MODEL 39131789 rrna 5S_rRNA 5S ribosomal RNA 8866998 pseudo LOC102005051 nucleosome assembly protein 1-like 1 pseudogene NW_004955491 8228056 8233055 + 102005051 AGCD01060610 MODEL 8876351 ncrna LOC102007199 uncharacterized LOC102007199 NW_004955409 10077543 10110578 - 102007199 AGCD01009457;AGCD01009458;GBDF01260753;XR_001232639;XR_001232640;XR_259766 MODEL 8996651 protein-coding Cops7b COP9 signalosome subunit 7B INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN COP9 signalosome (ortholog); nucleoplasm (ortholog) NW_004955453 3967241 3991802 - 102019770 AGCD01044671;AGCD01044672;GBDJ01177150;XM_005395389;XM_005395390;XM_005395391;XM_005395392;XM_013519955 XP_005395446;XP_005395447;XP_005395448;XP_005395449;XP_013375409 MODEL 10099434 protein-coding Dmbt1 deleted in malignant brain tumors 1 ENCODES a protein that exhibits DNA binding (ortholog); heparan sulfate binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); blastocyst development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955477 863388 899703 + 106146406 AGCD01055495;AGCD01055496;GBCQ01031749;XM_013503090;XM_013503091;XM_013503092;XM_013503093;XM_013503094 XP_013358544;XP_013358545;XP_013358546;XP_013358547;XP_013358548 MODEL 10239047 protein-coding LOC106147053 uncharacterized LOC106147053 NW_004955514 4105400 4112478 + 106147053 AGCD01067127;GBDF01057017;XM_013506749 XP_013362203 MODEL 8739315 protein-coding LOC102004343 general transcription factor II-I repeat domain-containing protein 1-like NW_004955402 7011600 7036323 - 102004343 AGCD01000164;AGCD01000165;GBDJ01109813;XM_005373133 XP_005373190 MODEL 8739138 protein-coding Kdelr2 KDEL endoplasmic reticulum protein retention receptor 2 ENCODES a protein that exhibits ER lumen protein retrieval receptor activity (ortholog); INVOLVED IN maintenance of protein localization in endoplasmic reticulum (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); osteogenesis imperfecta type 21 (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955460 13202400 13221319 + 102020774 AGCD01048674;GBCQ01041850;XM_005397890;XM_013521168 XP_005397947;XP_013376622 MODEL 8790518 pseudo LOC102010631 ras-related protein Rab-18 pseudogene NW_004955438 11389072 11389615 - 102010631 AGCD01035237 MODEL 8986910 pseudo LOC102009848 transcription elongation factor B polypeptide 1 pseudogene NW_004955489 234222 234732 + 102009848 AGCD01059787 MODEL 8829052 protein-coding Lmtk3 lemur tyrosine kinase 3 ENCODES a protein that exhibits protein serine kinase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955559 1994851 2011578 + 102021716 AGCD01073685;AGCD01073686;GBBH01192666;XM_013508949 XP_013364403 MODEL 8810340 pseudo LOC102003975 tubulin alpha-1 chain-like NW_004955420 23684889 23685741 + 102003975 AGCD01021253 MODEL 8739347 protein-coding LOC102007206 histone H2A type 1 NW_004955465 13392074 13392621 - 102007206 AGCD01050607;XM_005398951 XP_005399008 MODEL 8964319 protein-coding Cnn3 calponin 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); negative regulation of ATP-dependent activity (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cholangiocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955435 80185 89216 - 102022733 AGCD01032711;AGCD01032712;GBBH01201043;XM_013516526 XP_013371980 MODEL 8826539 protein-coding Acsf3 acyl-CoA synthetase family member 3 ENCODES a protein that exhibits malonyl-CoA synthetase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); malonate catabolic process (ortholog); ASSOCIATED WITH Arachnoid Cysts (ortholog); cervical cancer (ortholog); combined malonic and methylmalonic acidemia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955541 2837487 2876220 + 102008259 AGCD01071426;AGCD01071427;AGCD01071428;GBBH01117625;XM_005411031;XM_013507984;XM_013507986 XP_005411088;XP_013363438;XP_013363440 MODEL 9038307 protein-coding Chn2 chimerin 2 NW_004955410 30711970 30988787 + 102012291 AGCD01011313;GBDI01328531;XM_005377472;XM_005377474;XM_005377475 XP_005377529;XP_005377531;XP_005377532 MODEL 9056865 protein-coding Cd63 CD63 molecule ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); endosome to melanosome transport (ortholog); ASSOCIATED WITH carotid artery disease (ortholog); colon adenocarcinoma (ortholog); diabetic neuropathy (ortholog); FOUND IN cell surface (ortholog); endosome lumen (ortholog); endosome membrane (ortholog) NW_004955458 3362511 3363916 - 102025765 AGCD01047296;GBCE01000424;XM_013520969 XP_013376423 MODEL 8723231 protein-coding LOC102005737 olfactory receptor 8J3-like NW_004955511 1491665 1492606 + 102005737 AGCD01066369;XM_005407963 XP_005408020 MODEL 8859607 protein-coding Kash5 KASH domain containing 5 ENCODES a protein that exhibits dynein complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); chromosome localization to nuclear envelope involved in homologous chromosome segregation (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH azoospermia (ortholog); cervical cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN chromosome, telomeric region (ortholog); lateral element (ortholog); meiotic nuclear membrane microtubule tethering complex (ortholog) NW_004955559 1416844 1438451 - 102018343 AGCD01073644;AGCD01073645;AGCD01073646;GBDK01220478;XM_013509050 XP_013364504 MODEL 8977572 ncrna LOC102008691 uncharacterized LOC102008691 NW_004955406 921242 942095 - 102008691 AGCD01005623;GBDF01120365;XR_001236178 MODEL 9038497 protein-coding Aifm2 AIF family member 2, ferroptosis suppressor ENCODES a protein that exhibits DNA binding (ortholog); electron-transferring-flavoprotein dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); cellular detoxification (ortholog); negative regulation of ferroptosis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955437 21111298 21126487 + 102016636 AGCD01034898;GBDF01115627;XM_005390068;XM_005390069 XP_005390125;XP_005390126 MODEL 39131641 rrna 5S_rRNA 5S ribosomal RNA 9029045 protein-coding Hyou1 hypoxia up-regulated 1 ENCODES a protein that exhibits ATP binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); smooth endoplasmic reticulum (ortholog) NW_004955412 20149104 20161378 - 102023677 AGCD01012996;GBDF01002863;XM_005378294;XM_005378295;XM_005378296;XM_005378297 XP_005378351;XP_005378352;XP_005378353;XP_005378354 MODEL 8950552 protein-coding Elfn2 extracellular leucine rich repeat and fibronectin type III domain containing 2 INVOLVED IN chemical synaptic transmission (ortholog); establishment of protein localization (ortholog); gene expression (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN postsynaptic density membrane (ortholog); synapse (ortholog) NW_004955413 23805494 23862067 - 102030621 AGCD01014335;AGCD01014336;AGCD01014337;GBDF01124369;XM_005379199;XM_005379200;XM_005379201;XM_013511682;XM_013511683;XM_013511684;XM_013511685;XM_013511686;XM_013511687;XM_013511688 XP_005379256;XP_005379257;XP_005379258;XP_013367136;XP_013367137;XP_013367138;XP_013367139;XP_013367140;XP_013367141;XP_013367142 MODEL 8742333 protein-coding C1qtnf7 C1q and TNF related 7 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Hypoxia (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955480 8546222 8644361 - 102018493 AGCD01056729;AGCD01056730;GBDJ01388679;XM_005402531;XM_005402532;XM_005402533 XP_005402588;XP_005402589;XP_005402590 MODEL 8717791 pseudo LOC102008333 thrombospondin type-1 domain-containing protein 1-like NW_004955426 16226528 16227149 - 102008333 AGCD01026464 MODEL 9022016 ncrna LOC102011824 uncharacterized LOC102011824 NW_004955402 7083653 7093047 - 102011824 AGCD01000165;GBDF01118415;XR_259035 MODEL 9045935 ncrna LOC102009827 uncharacterized LOC102009827 NW_004955414 26483702 26488503 - 102009827 AGCD01015645;GBCB01079189;XR_260198 MODEL 8926813 protein-coding Camp cathelicidin antimicrobial peptide INVOLVED IN amyloid fibril formation (ortholog); antibacterial innate immune response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); dentin caries (ortholog); FOUND IN cell projection (ortholog); extracellular region (ortholog); specific granule (ortholog) NW_004955420 24911920 24914698 + 102014676 AGCD01021338;GBBH01002601;XM_005383402 XP_005383459 MODEL 8768356 protein-coding LOC102009432 olfactory receptor 7G2-like NW_004955563 246588 247514 + 102009432 AGCD01074056;XM_005413197 XP_005413254 MODEL 8821776 ncrna LOC102006121 uncharacterized LOC102006121 NW_004955470 11481867 11487499 + 102006121 AGCD01052889;XR_263505 MODEL 9012361 trna Trnal-uag transfer RNA leucine (anticodon UAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955467;NW_004955550 8841723;1420231 8841804;1420312 +;+ 101978792 AGCD01051475;AGCD01072566 MODEL 126903042 protein-coding GIMAP6 GTPase, IMAP family member 6 8857242 protein-coding Cetn1 centrin 1 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); heterotrimeric G-protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to heat (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); microtubule organizing center (ortholog) NW_004955402 9381400 9382158 - 102025525 AGCD01000214;GBDF01007446;XM_005372681 XP_005372738 MODEL 8745459 protein-coding LOC102005739 olfactory receptor 5L1-like NW_004955511 649905 655429 + 102005739 AGCD01066337;XM_013506360 XP_013361814 MODEL 10293046 protein-coding LOC106149993 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 9935365 9938039 - 106149993 AGCD01048564;XM_013521114 XP_013376568 MODEL 9007207 protein-coding Ccl25 C-C motif chemokine ligand 25 ENCODES a protein that exhibits CCR10 chemokine receptor binding (ortholog); chemokine activity (ortholog); chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell chemotaxis (ortholog); chemotaxis (ortholog); ASSOCIATED WITH Jaundice (ortholog); ovarian serous cystadenocarcinoma (ortholog); pleurisy (ortholog) NW_004955563 1249098 1255469 - 102016432 AGCD01074137;GBDJ01143526;XM_005413136 XP_005413193 MODEL 39131790 rrna 5S_rRNA 5S ribosomal RNA 8739765 protein-coding Arfip2 ARF interacting protein 2 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); identical protein binding (ortholog); membrane curvature sensor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); mitophagy (ortholog); protein localization to phagophore assembly site (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955414 22209515 22214353 - 102023461 AGCD01015449;GBDI01078369;XM_005380149;XM_005380151;XM_013511831 XP_005380206;XP_005380208;XP_013367285 MODEL 8901481 protein-coding LOC102012975 keratin-associated protein 5-5-like NW_004955422 13414755 13423735 - 102012975 AGCD01022823;AGCD01022824;AGCD01022825;XM_013513832 XP_013369286 MODEL 8708772 protein-coding Amotl1 angiomotin like 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of cell polarity involved in ameboidal cell migration (ortholog); positive regulation of blood vessel endothelial cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); cleft palate (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); COP9 signalosome (ortholog) NW_004955605 113570 275921 - 102024076 AGCD01076930;AGCD01076931;AGCD01076932;AGCD01076933;AGCD01076934;AGCD01076935;AGCD01076936;AGCD01076937;AGCD01076938;GBCE01000888;XM_005414888;XM_005414889;XM_005414890;XM_005414891;XM_005414892;XM_013510098 XP_005414945;XP_005414946;XP_005414947;XP_005414948;XP_005414949;XP_013365552 MODEL 8905341 protein-coding Evc EvC ciliary complex subunit 1 INVOLVED IN cartilage development (ortholog); endochondral bone growth (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ciliary basal body (ortholog); ciliary membrane (ortholog); cilium (ortholog) NW_004955514 4279603 4330897 - 102022418 AGCD01067129;AGCD01067130;AGCD01067131;GBCQ01005915;XM_013506839;XM_013506840;XM_013506841;XR_001231780 XP_013362293;XP_013362294;XP_013362295 MODEL 8975514 protein-coding Cdkn1c cyclin dependent kinase inhibitor 1C ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); molecular function inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adrenal gland development (ortholog); camera-type eye development (ortholog); digestive system development (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Beckwith-Wiedemann syndrome (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 14576971 14578868 - 102014916 AGCD01022860;GBCC01021598;GBDJ01004462;XM_005384956 XP_005385013 MODEL 8948794 protein-coding Ikbip IKBKB interacting protein INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); protein phosphorylation (ortholog); response to interleukin-1 (ortholog); ASSOCIATED WITH cervical cancer (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955405 34600211 34619614 - 102015476 AGCD01005380;GBDK01395326;XM_005374509;XM_005374510 XP_005374566;XP_005374567 MODEL 39134256 misc_rna 7SK 7SK RNA 9036680 protein-coding Aopep aminopeptidase O (putative) ASSOCIATED WITH atrial fibrillation (ortholog); breast cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955422 21680488 22020935 + 102004493 AGCD01023138;AGCD01023139;AGCD01023140;AGCD01023141;AGCD01023142;AGCD01023143;AGCD01023144;AGCD01023145;GBDF01016215;XM_013513835 XP_013369289 MODEL 8891940 protein-coding LOC102004346 ADP/ATP translocase 3-like NW_004956002 67 3761 + 102004346 AGCD01078844;AGCD01078845;GBCC01015784;GBDJ01370059;XM_013510213 XP_013365667 MODEL 10134877 ncrna LOC106147054 uncharacterized LOC106147054 NW_004955514 5106802 5110809 - 106147054 AGCD01067147;GBDF01166068;XR_001231761 MODEL 8977089 protein-coding Kdelr3 KDEL endoplasmic reticulum protein retention receptor 3 ENCODES a protein that exhibits ER lumen protein retrieval receptor activity (ortholog); INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); stomach cancer (ortholog); FOUND IN COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 24638551 24648723 + 102020321 AGCD01014373;GBDF01290082;XM_005379260 XP_005379317 MODEL 8809352 protein-coding Cc2d2a coiled-coil and C2 domain containing 2A INVOLVED IN axoneme assembly (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anencephaly (ortholog); astigmatism (ortholog); FOUND IN ciliary transition zone (ortholog); MKS complex (ortholog) NW_004955480 8404239 8514792 - 102017335 AGCD01056722;AGCD01056723;AGCD01056724;AGCD01056725;AGCD01056726;AGCD01056727;GBBH01188254;GBCE01065243;XM_005402527 XP_005402584 MODEL 8712920 protein-coding Awat2 acyl-CoA wax alcohol acyltransferase 2 ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); retinol O-fatty-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); wax biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); dry eye syndrome (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955475 9594157 9634596 - 102019267 AGCD01055068;GBCC01013125;XM_005401606;XM_005401607;XM_005401608 XP_005401663;XP_005401664;XP_005401665 MODEL 8813080 protein-coding Fgd1 FYVE, RhoGEF and PH domain containing 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); filopodium assembly (ortholog); ASSOCIATED WITH Aarskog syndrome (ortholog); acute myeloid leukemia (ortholog); amblyopia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955475 1703374 1752710 - 102022074 AGCD01054758;GBDI01024804;XM_013502823 XP_013358277 MODEL 9039159 protein-coding LOC102017879 A-kinase anchor protein 2 NW_004955419 16940266 17406309 - 102017879 AGCD01020138;AGCD01020139;AGCD01020140;AGCD01020141;AGCD01020142;AGCD01020143;AGCD01020144;AGCD01020145;AGCD01020146;AGCD01020147;AGCD01020148;AGCD01020149;AGCD01020150;AGCD01020151;GBDI01328539;GBDK01021121;XM_005382747 XP_005382804 MODEL 9031739 protein-coding Grxcr1 glutaredoxin and cysteine rich domain containing 1 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transmembrane transport (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 25 (ortholog); Deafness (ortholog); FOUND IN kinocilium (ortholog); stereocilium (ortholog) NW_004955443 4799056 4908749 - 102007375 AGCD01038222;AGCD01038223;AGCD01038224;AGCD01038225;GBDF01078342;XM_005391916 XP_005391973 MODEL 8912503 pseudo LOC102005056 cullin-4B pseudogene NW_004955422 28787889 28796918 + 102005056 AGCD01023368;AGCD01023369;AGCD01023370 MODEL 8895307 pseudo LOC102007200 actin, cytoplasmic 2-like NW_004955409 20791291 20792243 + 102007200 AGCD01009930 MODEL 8871315 protein-coding Kat14 lysine acetyltransferase 14 ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN ATAC complex (ortholog); nucleus (ortholog) NW_004955415 26872095 26895009 + 102012957 AGCD01016610;AGCD01016611;GBDF01291273;XM_005380916;XM_005380917;XM_005380919 XP_005380973;XP_005380974;XP_005380976 MODEL 8948405 protein-coding LOC102021937 alcohol dehydrogenase 4 NW_004955405 9357258 9377324 - 102021937 AGCD01004771;GBDI01329017;XM_005374294 XP_005374351 MODEL 8968185 ncrna LOC102010634 uncharacterized LOC102010634 NW_004955440 18844372 18859013 - 102010634 AGCD01036623;GBDF01150944;XR_262045 MODEL 8857460 protein-coding LOC102004703 leucine-rich repeat-containing protein 48 NW_004955478 11265115 11298661 - 102004703 AGCD01056165;AGCD01056166;GBBH01117002;GBDJ01386727;XM_013503219 XP_013358673 MODEL 8943424 protein-coding Cldn15 claudin 15 ENCODES a protein that exhibits paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of intestinal D-glucose absorption (ortholog); regulation of intestinal lipid absorption (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); malignant mesothelioma (ortholog); FOUND IN lateral plasma membrane (ortholog); plasma membrane (ortholog); tight junction (ortholog) NW_004955456 16062044 16067612 + 102021850 AGCD01046686;AGCD01046687;GBDK01040110;XM_005396856;XM_005396857 XP_005396913;XP_005396914 MODEL 10076501 protein-coding C1qtnf8 C1q and TNF related 8 INVOLVED IN positive regulation of cell motility (ortholog); ASSOCIATED WITH uveal melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955442 16159901 16162152 + 106149289 AGCD01037893;XM_013517653 XP_013373107 MODEL 8908319 ncrna LOC102007558 uncharacterized LOC102007558 NW_004955420 29057445 29063697 + 102007558 AGCD01021493;GBDF01157337;XR_001233702;XR_260770 MODEL 8754776 protein-coding Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 INVOLVED IN positive regulation of cholesterol efflux (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 7095977 7198632 - 102004788 AGCD01048478;AGCD01048479;GBDJ01033319;XM_005397768;XM_013521285 XP_005397825;XP_013376739 MODEL 8733570 pseudo LOC102009854 cytochrome c oxidase assembly factor 5 pseudogene NW_004955424 27866525 27870117 - 102009854 AGCD01025137 MODEL 8723280 protein-coding LOC102007210 NKG2-D type II integral membrane protein NW_004955413 7623358 7639703 - 102007210 AGCD01013827;GBDI01345487;XM_005378934 XP_005378991 MODEL 39132519 rrna 5S_rRNA 5S ribosomal RNA 8965241 protein-coding Cd68 CD68 molecule INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to nutrient levels (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN lysosome (ortholog); plasma membrane (ortholog) NW_004955467 9340490 9343912 - 102009164 AGCD01051497;GBDJ01000965;XM_005399476 XP_005399533 MODEL 8761964 protein-coding Acsl1 acyl-CoA synthetase long chain family member 1 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine palmitoyltransferase I deficiency pathway; carnitine-acylcarnitine translocase deficiency; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955403 24190674 24235354 + 102004133 AGCD01002270;AGCD01002271;GBCB01035722;XM_005373482;XM_013513016;XM_013513022 XP_005373539;XP_013368470;XP_013368476 MODEL 8817190 pseudo LOC102006123 short/branched chain specific acyl-CoA dehydrogenase, mitochondrial pseudogene NW_004955415 14660369 14661840 - 102006123 AGCD01016304 MODEL 8793106 protein-coding Adgrf5 adhesion G protein-coupled receptor F5 INVOLVED IN energy reserve metabolic process (ortholog); erythrocyte development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955437 11639555 11710362 - 102009876 AGCD01034580;GBBH01164762;XM_005389870;XM_005389871;XM_005389872;XM_005389873;XM_005389874 XP_005389927;XP_005389928;XP_005389929;XP_005389930;XP_005389931 MODEL 9006013 trna Trnam-cau transfer RNA methionine (anticodon CAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978797 AGCD01050592;AGCD01050595;AGCD01050596;AGCD01050607;AGCD01050636;AGCD01057602;AGCD01057629;AGCD01057630;AGCD01071784 MODEL 8842986 protein-coding LOC102007211 60S ribosomal protein L9-like NW_004955468 1922431 1924783 + 102007211 AGCD01051787;GBDF01014892;XM_005399914 XP_005399971 MODEL 9019091 protein-coding Epha1 EPH receptor A1 ENCODES a protein that exhibits ephrin receptor activity (ortholog); fibronectin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); negative regulation of cell migration (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955494 256008 268777 + 102024246 AGCD01061372;GBBH01102984;GBDI01325851;XM_005405360;XM_013504977 XP_005405417;XP_013360431 MODEL 8748680 protein-coding Axdnd1 axonemal dynein light chain domain containing 1 INVOLVED IN axoneme assembly (ortholog); establishment of Sertoli cell barrier (ortholog); leukocyte migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955406 18717383 18859263 + 102003088 AGCD01006057;AGCD01006058;AGCD01006059;AGCD01006060;AGCD01006061;AGCD01006062;AGCD01006063;AGCD01006064;AGCD01006065;AGCD01006066;AGCD01006067;AGCD01006068;GBDF01083157;XM_005374953;XM_005374954;XM_005374955;XM_005374956;XM_005374957;XM_005374958;XM_013521187;XM_013521195 XP_005375010;XP_005375011;XP_005375012;XP_005375013;XP_005375014;XP_005375015;XP_013376641;XP_013376649 MODEL 8720602 protein-coding Dmbx1 diencephalon/mesencephalon homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult feeding behavior (ortholog); adult locomotory behavior (ortholog); brain development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Developmental Disabilities (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955464 11788526 11811885 - 102019153 AGCD01050161;GBDF01264890;XM_005398674 XP_005398731 MODEL 10320450 pseudo LOC106149994 AN1-type zinc finger protein 6 pseudogene NW_004955460 14141310 14146714 - 106149994 AGCD01048740 MODEL 9022768 protein-coding LOC102009828 olfactory receptor 52N2-like NW_004955414 21765507 21766469 + 102009828 AGCD01015432;XM_005380503 XP_005380560 MODEL 8968284 protein-coding Elk1 ETS transcription factor ELK1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to lipid (ortholog); cellular response to testosterone stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); mitochondrial membrane (ortholog) NW_004955516 431081 444871 + 102015338 AGCD01067385;GBCE01187012;XM_005408941;XM_005408942 XP_005408998;XP_005408999 MODEL 8936224 protein-coding LOC102007212 C-reactive protein NW_004955468 11525824 11527555 - 102007212 AGCD01052134;XM_013522300 XP_013377754 MODEL 8780315 protein-coding Evc2 EvC ciliary complex subunit 2 INVOLVED IN smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); nucleus (ortholog) NW_004955514 4332624 4430844 + 102023182 AGCD01067131;AGCD01067132;AGCD01067133;GBDK01357154;XM_005408823;XM_005408825;XM_005408826;XM_005408827;XM_013506842;XM_013506843;XM_013506844 XP_005408880;XP_005408882;XP_005408883;XP_005408884;XP_013362296;XP_013362297;XP_013362298 MODEL 8781043 protein-coding Amotl2 angiomotin like 2 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN endothelial cell morphogenesis (ortholog); hippo signaling (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955501 4192339 4209150 + 102024137 AGCD01064115;GBDF01307407;XM_005406800;XM_013505791 XP_005406857;XP_013361245 MODEL 8788322 ncrna LOC102003977 uncharacterized LOC102003977 NW_004955492 6357508 6415069 - 102003977 AGCD01060766;GBCQ01139758;XR_264056;XR_264057 MODEL 39134257 misc_rna 7SK 7SK RNA 8983894 protein-coding Cdkn2aip CDKN2A interacting protein ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of cell growth (ortholog); positive regulation of cell growth (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN granular component (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955403 25363170 25366481 - 102010014 AGCD01002287;GBDI01174579;XM_005373504 XP_005373561 MODEL 8717200 protein-coding LOC102009434 zinc finger protein 709-like NW_004955569 187430 209724 + 102009434 AGCD01074566;GBDF01011185;XM_013509367 XP_013364821 MODEL 8919745 protein-coding Chodl chondrolectin ENCODES a protein that exhibits hyaluronic acid binding (ortholog); INVOLVED IN regulation of neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955407 19483569 19507270 + 102014320 AGCD01007306;GBDI01221529;XM_005375582;XM_005375583 XP_005375639;XP_005375640 MODEL 8710659 protein-coding Cnnm1 cyclin and CBS domain divalent metal cation transport mediator 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955507 5283948 5342860 + 102015134 AGCD01065668;AGCD01065669;AGCD01065670;GBDF01172174;XM_005407668;XM_005407669 XP_005407725;XP_005407726 MODEL 8997029 pseudo LOC102004350 protein artemis pseudogene NW_004955406 36605973 36608435 + 102004350 AGCD01006559 MODEL 8784098 protein-coding LOC102004707 putative spermatogenesis-associated protein 31D3 NW_004955417 24627190 24630152 + 102004707 AGCD01018467;GBDF01006014;XM_005381905 XP_005381962 MODEL 8996212 protein-coding Gimap6 GTPase, IMAP family member 6 INVOLVED IN autophagosome organization (ortholog); autophagy (ortholog); cell redox homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955491 5125041 5130182 - 102026332 AGCD01060471;GBBH01064402;XM_013504618 XP_013360072 MODEL 10159557 protein-coding LOC106147055 uncharacterized LOC106147055 NW_004955514 213278 214707 - 106147055 AGCD01067001;GBDI01016081;XM_013506750 XP_013362204 MODEL 8808575 protein-coding Acsl3 acyl-CoA synthetase long chain family member 3 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); fatty acid-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); ferroptosis (ortholog); long-chain fatty acid import into cell (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH asthma (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); lipid droplet (ortholog) NW_004955453 10916423 10963986 - 102022564 AGCD01044793;AGCD01044794;AGCD01044795;GBCE01118896;XM_005395491 XP_005395548 MODEL 8716118 protein-coding LOC102008692 olfactory receptor 5P3-like NW_004955453 4970345 4985354 - 102008692 AGCD01044701;XM_013519758 XP_013375212 MODEL 9022008 protein-coding Hypk huntingtin interacting protein K ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); protein stabilization (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 10258357 10259699 + 102011762 AGCD01017126;GBDJ01074318;XM_005381406;XM_013512561 XP_005381463;XP_013368015 MODEL 8985675 protein-coding LOC102017882 nuclear receptor subfamily 1 group I member 3-like NW_004955489 1878193 1883606 - 102017882 AGCD01059853;GBCQ01063310;XM_005404517;XM_005404518;XM_005404519 XP_005404574;XP_005404575;XP_005404576 MODEL 8949291 protein-coding Arfrp1 ADP ribosylation factor related protein 1 INVOLVED IN gastrulation (ortholog); Golgi to plasma membrane protein transport (ortholog); protein localization to Golgi apparatus (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); neuronal ceroid lipofuscinosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); trans-Golgi network (ortholog) NW_004955528 519887 529012 + 102005171 AGCD01069537;GBDF01118263;XM_005409945 XP_005410002 MODEL 8921295 ncrna LOC102007202 uncharacterized LOC102007202 NW_004955410 35720695 35722354 + 102007202 AGCD01011413;GBDF01055303;XR_259904 MODEL 8748736 protein-coding Lmx1a LIM homeobox transcription factor 1 alpha ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); central nervous system development (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 7 (ortholog); Hearing Loss (ortholog); schizophrenia (ortholog) NW_004955462 11328583 11484438 + 102006223 AGCD01049389;AGCD01049390;AGCD01049391;GBCE01146328;XM_005398249;XM_013521354;XM_013521355 XP_005398306;XP_013376808;XP_013376809 MODEL 8955886 protein-coding Camsap1 calmodulin regulated spectrin associated protein 1 ENCODES a protein that exhibits calmodulin binding (ortholog); microtubule binding (ortholog); microtubule minus-end binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); neuron projection development (ortholog); regulation of microtubule polymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN cytosol (ortholog); microtubule (ortholog); microtubule minus-end (ortholog) NW_004955513 4649816 4704282 + 102018212 AGCD01066938;GBCB01024793;XM_005408534;XM_005408537;XM_013506691;XM_013506692;XM_013506693;XM_013506694 XP_005408591;XP_005408594;XP_013362145;XP_013362146;XP_013362147;XP_013362148 MODEL 8752185 protein-coding Aox1 aldehyde oxidase 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); aldehyde oxidase activity (ortholog); aryl-aldehyde oxidase activity (ortholog); INVOLVED IN NAD+ catabolic process (ortholog); positive regulation of nitric oxide biosynthetic process (ortholog); xenobiotic metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955403 827538 875856 - 102005540 AGCD01001708;AGCD01001709;GBCC01021803;XM_005373246 XP_005373303 MODEL 8907598 pseudo LOC102007214 treacle protein pseudogene NW_004955413 22801161 22804226 + 102007214 AGCD01014317 MODEL 8896979 protein-coding Cldn16 claudin 16 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN paracellular transport (ortholog); positive regulation of calcium ion transport (ortholog); renal absorption (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); genetic disease (ortholog); Hypercalciuria (ortholog); FOUND IN bicellular tight junction (ortholog); plasma membrane (ortholog); tight junction (ortholog) NW_004955420 17684752 17714639 - 102015526 AGCD01021026;GBDJ01338095;XM_005383225;XM_005383226 XP_005383282;XP_005383283 MODEL 8702289 protein-coding Elk3 ETS transcription factor ELK3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955405 32526911 32559580 + 102009344 AGCD01005334;GBDJ01136162;XM_005374495;XM_013518514;XM_013518521;XR_259422 XP_005374552;XP_013373968;XP_013373975 MODEL 39131642 rrna 5S_rRNA 5S ribosomal RNA 8935612 ncrna LOC102005742 uncharacterized LOC102005742 NW_004955432 18897605 18899874 + 102005742 AGCD01031161;GBDF01006386;XR_261534 MODEL 39132525 rrna 5S_rRNA 5S ribosomal RNA 8833039 protein-coding LOC102012976 guanylate-binding protein 6 NW_004955423 5080353 5100169 - 102012976 AGCD01023554;AGCD01023555;GBCQ01164165;XM_005385101;XM_005385102;XM_005385103 XP_005385158;XP_005385159;XP_005385160 MODEL 8816438 pseudo LOC102006124 motile sperm domain-containing protein 1 pseudogene NW_004955476 50263 52111 + 102006124 AGCD01055190 MODEL 9001794 protein-coding Bcl9l BCL9 like ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); positive regulation of epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955412 20029988 20059057 - 102018906 AGCD01012992;GBDI01119157;XM_005378276;XM_005378277;XM_005378278;XM_005378280;XM_005378281;XM_013511109;XM_013511110 XP_005378333;XP_005378334;XP_005378335;XP_005378337;XP_005378338;XP_013366563;XP_013366564 MODEL 8921963 protein-coding Grxcr2 glutaredoxin and cysteine rich domain containing 2 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); inner ear receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 101 (ortholog); FOUND IN microvillus (ortholog); stereocilium base (ortholog); stereocilium shaft (ortholog) NW_004955415 8203968 8220148 + 102019798 AGCD01016067;GBDF01042113;XM_005380686 XP_005380743 MODEL 8718756 protein-coding Fgd2 FYVE, RhoGEF and PH domain containing 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phosphate binding (ortholog); INVOLVED IN positive regulation of JUN kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); nucleus (ortholog) NW_004955437 6026087 6038740 - 102021388 AGCD01034413;AGCD01034414;GBDK01184372;XM_005389626;XM_005389627;XM_005389628;XM_013516942;XM_013516943 XP_005389683;XP_005389684;XP_005389685;XP_013372396;XP_013372397 MODEL 9002298 protein-coding Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); IkappaB kinase activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); breast cancer (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955536 611965 658647 - 102009105 AGCD01070732;GBDI01225670;XM_005410510 XP_005410567 MODEL 8872183 protein-coding Kat2a lysine acetyltransferase 2A ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN alpha-tubulin acetylation (ortholog); antiviral innate immune response (ortholog); cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; p53 signaling pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN ATAC complex (ortholog); centrosome (ortholog); chromatin (ortholog) NW_004955451 16192228 16197103 - 102013137 AGCD01043658;GBBH01163332;GBCQ01066649;XM_013519392 XP_013374846 MODEL 10381713 pseudo LOC106149995 ubiquitin carboxyl-terminal hydrolase 42 pseudogene NW_004955460 9938049 9942676 - 106149995 AGCD01048564 MODEL 8804181 ncrna LOC102009829 uncharacterized LOC102009829 NW_004955415 3199565 3227325 + 102009829 AGCD01015927;GBDF01041582;XR_260260;XR_260261 MODEL 8862821 protein-coding Axin1 axin 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN axial mesoderm development (ortholog); axial mesoderm formation (ortholog); beta-catenin destruction complex assembly (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; N-cadherin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Caudal Duplication Anomaly (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cell cortex (ortholog); cell periphery (ortholog) NW_004955442 16845728 16898301 + 102030483 AGCD01037918;AGCD01037919;AGCD01037920;AGCD01037921;GBDK01223506;XM_005391658;XM_013517744 XP_005391715;XP_013373198 MODEL 8853421 pseudo LOC102010635 ubiquitin carboxyl-terminal hydrolase 48-like NW_004955441 3586283 3611712 + 102010635 AGCD01036808;AGCD01036809;AGCD01036810;AGCD01036811;AGCD01036812;AGCD01036813 MODEL 39134258 misc_rna 7SK 7SK RNA 8917395 protein-coding LOC102007561 vomeronasal type-1 receptor 48-like NW_004955421 21854981 21855904 - 102007561 AGCD01022122;XM_005383930 XP_005383987 MODEL 8962602 protein-coding LOC102009437 uncharacterized LOC102009437 NW_004955447 15549581 15578315 + 102009437 AGCD01041059;AGCD01041060;GBBH01122934;XM_013518483 XP_013373937 MODEL 9000691 protein-coding Cdkn2b cyclin dependent kinase inhibitor 2B ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to cell-matrix adhesion (ortholog); cellular response to nutrient (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955472 12275613 12280141 + 102004697 AGCD01053789;GBDF01020019;XM_005401165 XP_005401222 MODEL 8818607 protein-coding Cc2d2b coiled-coil and C2 domain containing 2B NW_004955507 2160454 2262333 + 102012110 AGCD01065580;AGCD01065581;AGCD01065582;AGCD01065583;GBDK01197876;XM_005407556;XM_013506214;XM_013506215;XM_013506216;XM_013506217;XM_013506218;XM_013506219;XM_013506220;XM_013506221;XM_013506222;XM_013506223;XM_013506224 XP_005407613;XP_013361668;XP_013361669;XP_013361670;XP_013361671;XP_013361672;XP_013361673;XP_013361674;XP_013361675;XP_013361676;XP_013361677;XP_013361678 MODEL 8707172 pseudo LOC102007219 tRNA methyltransferase 10 homolog B pseudogene NW_004955472 2140534 2143118 - 102007219 AGCD01053437 MODEL 15036852 trna Trnan-auu transfer RNA asparagine (anticodon AUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978824 8739323 protein-coding LOC102004709 uncharacterized LOC102004709 NW_004955482 1567935 1574274 + 102004709 AGCD01057221;GBDJ01033180;XM_005402995;XR_263820;XR_263821;XR_263822 XP_005403052 MODEL 8911755 protein-coding Adgrg1 adhesion G protein-coupled receptor G1 ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); brain development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); bilateral frontoparietal polymicrogyria (ortholog); FOUND IN extracellular region (ortholog); glial limiting end-foot (ortholog); membrane raft (ortholog) NW_004955433 15253196 15288982 + 102030658 AGCD01031751;GBCQ01011245;XM_005388402;XM_013516235;XM_013516236;XM_013516237;XM_013516238;XM_013516239 XP_005388459;XP_013371689;XP_013371690;XP_013371691;XP_013371692;XP_013371693 MODEL 8902003 pseudo LOC102021938 casein kinase I isoform epsilon pseudogene NW_004955452 11410970 11412430 - 102021938 AGCD01044335;AGCD01044336;XM_005395310 MODEL 8977656 protein-coding Epha10 EPH receptor A10 ENCODES a protein that exhibits ATP binding (ortholog); transmembrane-ephrin receptor activity (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 88 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955452 15510054 15547769 - 102014005 AGCD01044486;AGCD01044487;GBDF01009991;XM_013519462 XP_013374916 MODEL 8851335 protein-coding Dcp1a decapping mRNA 1A ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); identical protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN mRNA methylguanosine-cap decapping (ortholog); protein localization to cytoplasmic stress granule (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); dendrite (ortholog) NW_004955430 3225840 3284058 - 102004100 AGCD01029199;GBDF01225893;XM_005387374;XM_013515611 XP_005387431;XP_013371065 MODEL 8936920 pseudo LOC102008707 retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta pseudogene NW_004955411 1587497 1587967 + 102008707 AGCD01011485;XM_005377918 MODEL 8734773 protein-coding Hypm huntingtin interacting protein M NW_004955601 38906 39259 + 102029686 AGCD01076744;XM_005414824 XP_005414881 MODEL 8909167 protein-coding Aifm3 AIF family member 3 INVOLVED IN execution phase of apoptosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955442 19334217 19346438 - 102022641 AGCD01038052;GBDF01149481;XM_005391824;XM_005391825;XM_005391827;XM_005391828;XM_005391831 XP_005391881;XP_005391882;XP_005391884;XP_005391885;XP_005391888 MODEL 8782082 protein-coding C1r complement C1r ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); zymogen activation (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome periodontal type 1 (ortholog); Ehlers-Danlos syndrome periodontal type 2 (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); extracellular region (ortholog) NW_004955413 4652156 4660897 - 102011752 AGCD01013623;GBCE01007078;XM_005378856 XP_005378913 MODEL 8857247 protein-coding Kdf1 keratinocyte differentiation factor 1 INVOLVED IN developmental growth (ortholog); epidermal cell differentiation (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia 12 (ortholog); genetic disease (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); cell leading edge (ortholog) NW_004955452 6280391 6288985 - 102026068 AGCD01044100;AGCD01044101;GBDI01070239;XM_005394888;XM_005394890;XM_005394891;XM_005394892;XM_005394893 XP_005394945;XP_005394947;XP_005394948;XP_005394949;XP_005394950 MODEL 8939819 protein-coding Fgd3 FYVE, RhoGEF and PH domain containing 3 INVOLVED IN filopodium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955515 4967862 5025604 - 102025497 AGCD01067334;GBBH01035013;XM_013506892;XM_013506893;XM_013506894;XM_013506896;XM_013506897;XM_013506898;XM_013506899 XP_013362346;XP_013362347;XP_013362348;XP_013362350;XP_013362351;XP_013362352;XP_013362353 MODEL 9002394 protein-coding Cops8 COP9 signalosome subunit 8 INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); negative regulation of cell population proliferation (ortholog); protein deneddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955542 3129184 3140232 - 102011245 AGCD01071548;GBDI01117246;XM_005411238 XP_005411295 MODEL 8814297 ncrna LOC102009839 uncharacterized LOC102009839 NW_004955418 27098258 27125846 - 102009839 AGCD01019403;GBDK01371466;XR_001233544;XR_001233545;XR_001233546;XR_260585 MODEL 8718507 protein-coding Cetn2 centrin 2 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); heterotrimeric G-protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); nucleotide-excision repair (ortholog); regulation of cytokinesis (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN 9+2 motile cilium (ortholog); apical part of cell (ortholog); centriole (ortholog) NW_004955498 8131356 8135751 - 102012104 AGCD01063167;GBCQ01000744;XM_005406455 XP_005406512 MODEL 8873501 protein-coding LOC102003981 cytochrome P450 4F6-like NW_004955495 7714402 7725532 - 102003981 AGCD01062160;GBDF01159203;XM_005406063;XM_013505320;XM_013505321 XP_005406120;XP_013360774;XP_013360775 MODEL 9020512 protein-coding Chordc1 cysteine and histidine rich domain containing 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN negative regulation of Rho protein signal transduction (ortholog); protein folding (ortholog); regulation of cellular response to heat (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic myeloid leukemia (ortholog); colon adenocarcinoma (ortholog) NW_004955414 3699652 3717200 + 102030623 AGCD01014838;AGCD01014839;GBCE01099244;XM_005379722 XP_005379779 MODEL 8961508 protein-coding Cd69 CD69 molecule ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of T cell migration (ortholog); ASSOCIATED WITH arthritis (ortholog); Experimental Arthritis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955413 5579037 5586238 + 102020103 AGCD01013683;GBBH01203292;XM_005378883 XP_005378940 MODEL 39134259 misc_rna 7SK 7SK RNA 8814234 protein-coding Cnnm2 cyclin and CBS domain divalent metal cation transport mediator 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion transmembrane transporter activity (ortholog); INVOLVED IN magnesium ion homeostasis (ortholog); magnesium ion transport (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955485 7399085 7546176 - 102008733 AGCD01058654;AGCD01058655;AGCD01058656;AGCD01058657;AGCD01058658;AGCD01058659;AGCD01058660;GBBH01194039;GBDF01146287;XM_005403817;XM_013504078;XR_001231085 XP_005403874;XP_013359532 MODEL 8997881 protein-coding LOC102005068 olfactory receptor 8K3-like NW_004955511 1446139 1447077 + 102005068 AGCD01066367;XM_005407961 XP_005408018 MODEL 8827214 protein-coding LOC102011826 60S ribosomal protein L17 NW_004955402 34568222 34571290 - 102011826 AGCD01000865;GBDF01002140;XM_013510590 XP_013366044 MODEL 8715985 protein-coding LOC102004351 NADH-cytochrome b5 reductase 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 38958766 38964597 - 102004351 AGCD01006614;GBDK01276274;XM_005375237 XP_005375294 MODEL 8887013 pseudo LOC102006128 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955417 3954110 3955411 - 102006128 AGCD01017933 MODEL 8794618 protein-coding Gimd1 GIMAP family P-loop NTPase domain containing 1 NW_004955496 3049862 3060961 + 102007133 AGCD01062280;XM_005406216 XP_005406273 MODEL 9027470 protein-coding LOC102017883 zinc finger protein 75D NW_004955489 9388240 9400320 + 102017883 AGCD01060038;AGCD01060039;GBCE01139029;XM_005404607;XM_013504455 XP_005404664;XP_013359909 MODEL 8893762 protein-coding Acsl4 acyl-CoA synthetase long chain family member 4 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN dendritic spine development (ortholog); embryonic process involved in female pregnancy (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955490 6143833 6228395 + 102010170 AGCD01060217;AGCD01060218;GBCQ01006031;XM_005404662;XM_005404663;XM_013504536 XP_005404719;XP_005404720;XP_013359990 MODEL 8995857 protein-coding Evi2a ecotropic viral integration site 2A FOUND IN plasma membrane (ortholog) NW_004955481 6346024 6350216 - 102016709 AGCD01057024;GBDF01307664;XM_005402795;XM_013503425 XP_005402852;XP_013358879 MODEL 39131791 rrna 5S_rRNA 5S ribosomal RNA 8999334 protein-coding Epha2 EPH receptor A2 ENCODES a protein that exhibits ephrin receptor activity (ortholog); growth factor binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN axial mesoderm formation (ortholog); blood vessel development (ortholog); blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cataract 6 multiple types (ortholog); cervical cancer (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); focal adhesion (ortholog) NW_004955527 2120447 2151932 + 102004197 AGCD01069422;AGCD01069423;GBDI01327302;XM_005409845 XP_005409902 MODEL 10274622 protein-coding LOC106149996 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 9943924 10051409 - 106149996 AGCD01048564;AGCD01048565;AGCD01048566;AGCD01048567;AGCD01048568;AGCD01048569;GBDF01277242;XM_013521137;XM_013521138 XP_013376591;XP_013376592 MODEL 9035258 protein-coding Lmx1b LIM homeobox transcription factor 1 beta ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); camera-type eye development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH clubfoot (ortholog); Developmental Disabilities (ortholog); disease of mental health (ortholog); FOUND IN nucleus (ortholog) NW_004955419 1782566 1857375 - 102010371 AGCD01019658;AGCD01019659;GBCE01047362;XM_005382450;XM_005382451 XP_005382507;XP_005382508 MODEL 8971520 protein-coding Ap1ar adaptor related protein complex 1 associated regulatory protein ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); kinesin binding (ortholog); INVOLVED IN Golgi to endosome transport (ortholog); intracellular protein localization (ortholog); negative regulation of cell motility (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); transport vesicle (ortholog) NW_004955457 14456414 14471584 - 102006317 AGCD01047073;GBCB01100575;XM_005397124 XP_005397181 MODEL 39131643 rrna 5S_rRNA 5S ribosomal RNA 8721022 pseudo LOC102009438 nucleobindin-2 pseudogene NW_004955580 212934 215509 + 102009438 AGCD01075591 MODEL 8978265 pseudo LOC102005743 zinc finger protein 140-like NW_004955515 861668 865164 + 102005743 AGCD01067211;XM_005408920 MODEL 8920441 ncrna LOC102012977 uncharacterized LOC102012977 NW_004955495 5748410 5760737 - 102012977 AGCD01062024;AGCD01062025;AGCD01062026;GBCB01002782;XR_001231365 MODEL 10154685 ncrna LOC106147056 uncharacterized LOC106147056 NW_004955402 18792269 18825888 - 106147056 AGCD01000540;GBDI01034192;XR_001231763;XR_001231772;XR_001231775;XR_001231782;XR_001231786;XR_001231793;XR_001231799 MODEL 8982300 protein-coding LOC102007220 olfactory receptor 52H1-like NW_004955414 21459569 21460513 - 102007220 AGCD01015420;XM_005380497 XP_005380554 MODEL 8838885 pseudo LOC102007204 IST1 homolog pseudogene NW_004955463 5955659 5975823 - 102007204 AGCD01049650;AGCD01049651;AGCD01049652 MODEL 8706008 protein-coding Gsap gamma-secretase activating protein ENCODES a protein that exhibits amyloid-beta binding (ortholog); INVOLVED IN positive regulation of amyloid-beta formation (ortholog); regulation of proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN trans-Golgi network (ortholog) NW_004955410 7740548 7810563 + 102015486 AGCD01010723;GBCE01057270;GBCQ01176435;XM_013510519 XP_013365973 MODEL 8822550 ncrna LOC102009857 uncharacterized LOC102009857 NW_004955425 20777011 20788476 - 102009857 AGCD01025762;AGCD01025763;GBDJ01354331;XR_261165;XR_261166 MODEL 8876304 protein-coding Adgrg2 adhesion G protein-coupled receptor G2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive congenital bilateral absence of vas deferens (ortholog); azoospermia (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955586 359573 477277 + 102006515 AGCD01076031;GBDK01234833;XM_005414435;XM_013509887;XM_013509888;XM_013509889;XM_013509890;XM_013509891;XM_013509892;XM_013509893 XP_005414492;XP_013365341;XP_013365342;XP_013365343;XP_013365344;XP_013365345;XP_013365346;XP_013365347 MODEL 9005915 protein-coding Dcp1b decapping mRNA 1B INVOLVED IN cellular response to interleukin-17 (ortholog); protein localization to nucleus (ortholog); protein localization to P-body (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); P-body (ortholog) NW_004955454 4464399 4518613 - 102028378 AGCD01045122;AGCD01045123;GBCE01085759;XM_005395964;XM_013520130;XM_013520131;XM_013520132 XP_005396021;XP_013375584;XP_013375585;XP_013375586 MODEL 8712105 protein-coding Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon ENCODES a protein that exhibits identical protein binding (ortholog); IkappaB kinase activity (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to virus (ortholog); gene expression (ortholog); immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial membrane (ortholog) NW_004955406 42056014 42077701 + 102017949 AGCD01006696;GBDK01143454;XM_005375388;XM_005375389;XM_005375390;XM_005375392;XM_005375393 XP_005375445;XP_005375446;XP_005375447;XP_005375449;XP_005375450 MODEL 8893325 protein-coding Iah1 isoamyl acetate hydrolyzing esterase 1 (putative) ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955487 5172505 5180132 + 102024013 AGCD01059322;GBDJ01007583;XM_005404396 XP_005404453 MODEL 8707694 protein-coding Kat2b lysine acetyltransferase 2B ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to oxidative stress (ortholog); cellular response to parathyroid hormone stimulus (ortholog); PARTICIPATES IN cortisol signaling pathway; histone modification pathway; p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN A band (ortholog); actomyosin (ortholog); ATAC complex (ortholog) NW_004955430 12109493 12196102 + 102005162 AGCD01029488;AGCD01029489;GBDF01081550;XM_005387463;XM_005387464;XM_013515665;XM_013515666 XP_005387520;XP_005387521;XP_013371119;XP_013371120 MODEL 8964633 protein-coding Camsap2 calmodulin regulated spectrin associated protein family member 2 ENCODES a protein that exhibits microtubule minus-end binding (ortholog); INVOLVED IN axon development (ortholog); microtubule cytoskeleton organization (ortholog); regulation of dendrite development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955406 36958337 37055748 + 102005771 AGCD01006570;AGCD01006571;GBCQ01093718;XM_005375145;XM_005375146;XM_005375147 XP_005375202;XP_005375203;XP_005375204 MODEL 8791010 protein-coding Axin2 axin 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); I-SMAD binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); bone mineralization (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Animal Disease Models (ortholog); anodontia (ortholog); anxiety disorder (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955478 4952551 4982223 - 102005373 AGCD01055860;GBDJ01272005;GBDK01279480;XM_013503241 XP_013358695 MODEL 9013733 protein-coding Cldn17 claudin 17 ENCODES a protein that exhibits channel activity (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN cellular respiration (ortholog); gene expression (ortholog); inflammatory response (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); tight junction (ortholog) NW_004955407 29519400 29520625 - 102028380 AGCD01007609;GBDI01212283;XM_005375623 XP_005375680 MODEL 39131793 rrna 5S_rRNA 5S ribosomal RNA 9033228 protein-coding Evi2b ecotropic viral integration site 2B INVOLVED IN positive regulation of granulocyte differentiation (ortholog) NW_004955481 6332220 6342374 - 102017236 AGCD01057024;GBDK01241136;XM_005402796 XP_005402853 MODEL 39134260 misc_rna 7SK 7SK RNA 39131644 rrna 5S_rRNA 5S ribosomal RNA 8847647 protein-coding Bclaf1 BCL2 associated transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955439 608849 641005 + 102023745 AGCD01035590;AGCD01035591;GBDF01118482;XM_005390473;XM_005390474;XM_005390475;XM_005390476;XM_005390477;XM_005390478;XM_005390479;XM_013517364;XM_013517365 XP_005390530;XP_005390531;XP_005390532;XP_005390533;XP_005390534;XP_005390535;XP_005390536;XP_013372818;XP_013372819 MODEL 8927714 protein-coding Lnp1 leukemia NUP98 fusion partner 1 ASSOCIATED WITH colorectal cancer (ortholog); melanoma (ortholog); NEURODEVELOPMENTAL DISORDER WITH EPILEPSY AND HYPOPLASIA OF THE CORPUS CALLOSUM (ortholog) NW_004955427 1929092 1956878 + 102021577 AGCD01026886;AGCD01026887;GBDF01000484;XM_005386296 XP_005386353 MODEL 8780648 protein-coding LOC102005763 tetratricopeptide repeat protein 30B NW_004955403 19246934 19250365 + 102005763 AGCD01002121;GBDF01044632;XM_005373400 XP_005373457 MODEL 8750726 pseudo LOC102021251 60S ribosomal protein L23a pseudogene NW_004955493 6861814 6862285 + 102021251 AGCD01061146 MODEL 8740940 protein-coding Ccar1 cell division cycle and apoptosis regulator 1 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear envelope lumen (ortholog); nucleoplasm (ortholog) NW_004955425 20878178 20923007 + 102010179 AGCD01025768;AGCD01025769;GBDF01159549;XM_005386001;XM_005386002;XM_005386003 XP_005386058;XP_005386059;XP_005386060 MODEL 8787094 protein-coding Efcab11 EF-hand calcium binding domain 11 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955438 12269610 12420775 - 102011046 AGCD01035256;AGCD01035257;GBDF01157581;XM_005390275;XM_013517275;XM_013517276;XM_013517277;XM_013517278 XP_005390332;XP_013372729;XP_013372730;XP_013372731;XP_013372732 MODEL 8720374 protein-coding LOC102004352 tomoregulin-1-like NW_004955454 12413700 12441760 + 102004352 AGCD01045411;AGCD01045412;XM_013520017 XP_013375471 MODEL 8802784 protein-coding LOC102005749 tenascin-X-like NW_004955437 562600 578348 - 102005749 AGCD01034146;AGCD01034147;AGCD01034148;AGCD01034149;GBDI01324923;GBDK01430395;XM_013516899 XP_013372353 MODEL 8868705 ncrna LOC102008709 uncharacterized LOC102008709 NW_004955412 20482901 20493630 + 102008709 AGCD01013009;GBDF01240677;XR_001232902;XR_001232903;XR_260004 MODEL 8733248 protein-coding Cnnm3 cyclin and CBS domain divalent metal cation transport mediator 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog) NW_004955470 4179932 4193609 + 102026853 AGCD01052727;AGCD01052728;GBBH01142485;GBDJ01089290;XM_013522745 XP_013378199 MODEL 8766313 ncrna LOC102010640 uncharacterized LOC102010640 NW_004955556 1708260 1721389 - 102010640 AGCD01073200;GBBH01223895;XR_264978 MODEL 8837841 protein-coding Gin1 gypsy retrotransposon integrase 1 ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955418 10898069 10918460 + 102026007 AGCD01018988;GBCE01042578;XM_005382188;XM_005382189;XM_005382190;XM_005382191 XP_005382245;XP_005382246;XP_005382247;XP_005382248 MODEL 8832867 protein-coding Aig1 androgen induced 1 ENCODES a protein that exhibits FAHFA hydrolase activity (ortholog); INVOLVED IN long-chain fatty acid catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955436 17056630 17285022 - 102006161 AGCD01033941;AGCD01033942;AGCD01033943;AGCD01033944;AGCD01033945;GBDJ01186332;GBDK01191698;XM_013516660 XP_013372114 MODEL 8705779 protein-coding LOC102007563 uncharacterized LOC102007563 NW_004955493 470268 489066 - 102007563 AGCD01060852;AGCD01060853;AGCD01060854;GBDJ01366389;XM_013504742 XP_013360196 MODEL 9044426 protein-coding C1rl complement C1r subcomponent like ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955413 4663643 4670454 - 102012081 AGCD01013623;GBDI01312342;XM_005378857;XM_005378858 XP_005378914;XP_005378915 MODEL 8857087 protein-coding Cops9 COP9 signalosome subunit 9 INVOLVED IN cellular response to UV (ortholog); negative regulation of protein localization to nucleolus (ortholog); negative regulation of protein neddylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN chromatin (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955542 1131110 1135871 + 102019202 AGCD01071489;GBDI01018786;XM_005411169 XP_005411226 MODEL 9027317 protein-coding Kdm1a lysine demethylase 1A ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to cAMP (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN histone modification pathway; Notch signaling pathway; ASSOCIATED WITH ACTH-independent Macronodular Adrenal Hyperplasia 3 (ortholog); alopecia areata (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955452 3044042 3104650 + 102014206 AGCD01043910;AGCD01043911;AGCD01043912;GBBH01143986;GBDF01212309;XM_013519586;XM_013519587 XP_013375040;XP_013375041 MODEL 39132527 rrna 5S_rRNA 5S ribosomal RNA 8704512 protein-coding Ncdn neurochondrin INVOLVED IN bone resorption (ortholog); neuron projection development (ortholog); regulation of neuronal synaptic plasticity (ortholog); ASSOCIATED WITH Floating-Harbor syndrome (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955452 13650016 13659382 + 102019768 AGCD01044429;GBDF01120972;XM_005395148;XM_005395149;XM_005395150;XM_005395151;XM_013519573 XP_005395205;XP_005395206;XP_005395207;XP_005395208;XP_013375027 MODEL 10251936 protein-coding LOC106149997 basic proline-rich protein-like NW_004955460 10360557 10360799 + 106149997 AGCD01048580;GBBH01150818;XM_013521139 XP_013376593 MODEL 8978226 trna Trnan-guu transfer RNA asparagine (anticodon GUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978825 AGCD01028556;AGCD01030347;AGCD01043507;AGCD01049456;AGCD01052199;AGCD01062085;AGCD01080156 MODEL 39131794 rrna 5S_rRNA 5S ribosomal RNA 8956956 protein-coding Cdkn2c cyclin dependent kinase inhibitor 2C ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); disease of cellular proliferation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955464 8022596 8028241 - 102027157 AGCD01050078;GBDK01027484;XM_005398611 XP_005398668 MODEL 8988504 protein-coding Ampd1 adenosine monophosphate deaminase 1 ENCODES a protein that exhibits AMP deaminase activity (ortholog); identical protein binding (ortholog); myosin heavy chain binding (ortholog); INVOLVED IN GMP salvage (ortholog); IMP salvage (ortholog); response to ATP (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Adenosine Monophosphate Deaminase Deficiency (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog) NW_004955435 17962487 17991625 - 102019839 AGCD01033379;AGCD01033380;AGCD01033381;GBCB01001199;XM_005389004;XM_005389005;XM_005389006 XP_005389061;XP_005389062;XP_005389063 MODEL 8790519 protein-coding Axl AXL receptor tyrosine kinase ENCODES a protein that exhibits myosin heavy chain binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); apoptotic cell clearance (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN Gas6 - Axl signaling axis; ASSOCIATED WITH amenorrhea (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955555 189445 218509 + 102011151 AGCD01073024;GBDK01005488;XM_005412322;XM_005412323 XP_005412379;XP_005412380 MODEL 8936827 protein-coding LOC102005069 glycine N-acyltransferase-like protein Keg1 NW_004955511 3599452 3633026 - 102005069 AGCD01066468;AGCD01066469;GBCQ01010946;XM_005408044;XM_005408045;XM_005408046 XP_005408101;XP_005408102;XP_005408103 MODEL 10301189 protein-coding LOC106147057 uncharacterized LOC106147057 NW_004955514 1082367 1083540 - 106147057 AGCD01067036;GBDF01251435;XM_013506766 XP_013362220 MODEL 8918918 protein-coding Elk4 ETS transcription factor ELK4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955406 41325921 41333503 - 102010336 AGCD01006677;GBCE01022092;GBDF01222223;XM_013522928 XP_013378382 MODEL 9019310 ncrna LOC102005750 uncharacterized LOC102005750 NW_004955438 21332657 21334526 - 102005750 AGCD01035537;GBDK01039687;XR_261957 MODEL 8871029 protein-coding Fgd4 FYVE, RhoGEF and PH domain containing 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); INVOLVED IN lamellipodium assembly (ortholog); microspike assembly (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); FOUND IN filopodium (ortholog); lamellipodium (ortholog) NW_004955505 3108131 3314040 - 102009403 AGCD01065015;AGCD01065016;AGCD01065017;AGCD01065018;AGCD01065019;AGCD01065020;GBBH01177094;GBCE01037509;XM_013505926 XP_013361380 MODEL 9004348 protein-coding Cetn3 centrin 3 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); microtubule binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955418 21206387 21220984 + 102028416 AGCD01019265;AGCD01019266;GBDF01043246;XM_005382281 XP_005382338 MODEL 9009691 protein-coding Cd7 CD7 molecule ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN homeostasis of number of cells within a tissue (ortholog); positive regulation of T cell cytokine production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); cervical cancer (ortholog) NW_004955506 863188 865857 + 102011462 AGCD01065239;GBDI01280378;XM_005407205;XM_005407206 XP_005407262;XP_005407263 MODEL 8966850 protein-coding Epha3 EPH receptor A3 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN cell migration (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH atrial fibrillation (ortholog); colon adenocarcinoma (ortholog); disease of cellular proliferation (ortholog); FOUND IN early endosome (ortholog); extracellular region (ortholog); GABA-ergic synapse (ortholog) NW_004955407 4135671 4500900 - 102019666 AGCD01006872;AGCD01006873;AGCD01006874;AGCD01006875;AGCD01006876;AGCD01006877;AGCD01006878;AGCD01006879;AGCD01006880;AGCD01006881;GBBH01045871;XM_005375517;XM_005375518 XP_005375574;XP_005375575 MODEL 8857388 pseudo LOC102003317 mRNA-decapping enzyme 1A pseudogene NW_004955407 3818922 3820235 - 102003317 AGCD01006866 MODEL 8806460 ncrna LOC102009439 uncharacterized LOC102009439 NW_004955448 13394879 13451616 + 102009439 AGCD01041588;AGCD01041589;AGCD01041590;AGCD01041591;GBDK01000836;XR_262470 MODEL 8840191 protein-coding Arg1 arginase 1 ENCODES a protein that exhibits arginase activity (ortholog); identical protein binding (ortholog); manganese ion binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to glucagon stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute necrotizing pancreatitis (ortholog); amino acid metabolic disorder (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955436 12235767 12247817 + 102018129 AGCD01033834;GBDK01069675;XM_005389201;XM_005389202 XP_005389258;XP_005389259 MODEL 8751648 pseudo LOC102006131 polypeptide N-acetylgalactosaminyltransferase 11 pseudogene NW_004955418 29489392 29494643 + 102006131 AGCD01019466;AGCD01019467 MODEL 8833028 ncrna LOC102012206 uncharacterized LOC102012206 NW_004955421 24912739 24916609 - 102012206 AGCD01022223;XR_260826 MODEL 8942682 protein-coding Evi5 ecotropic viral integration site 5 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955423 1784255 1997561 + 102021566 AGCD01023455;AGCD01023456;AGCD01023457;AGCD01023458;AGCD01023459;AGCD01023460;AGCD01023461;GBDI01158274;XM_005385043;XM_005385044;XM_013514416;XM_013514417;XM_013514418;XM_013514419;XM_013514420;XM_013514421;XM_013514422 XP_005385100;XP_005385101;XP_013369870;XP_013369871;XP_013369872;XP_013369873;XP_013369874;XP_013369875;XP_013369876 MODEL 8987744 ncrna LOC102017885 uncharacterized LOC102017885 NW_004955422 15698420 15702889 - 102017885 AGCD01022881;GBDF01159222;XR_001233961;XR_001233962;XR_001233963;XR_001233964 MODEL 8788331 ncrna LOC102005769 uncharacterized LOC102005769 NW_004955405 37792705 37803781 - 102005769 AGCD01005459;AGCD01005460;GBBH01012524;XR_259443 MODEL 9045862 pseudo LOC102007222 protein SPT2 homolog pseudogene NW_004955474 802672 804690 - 102007222 AGCD01054229 MODEL 8981586 protein-coding Hint3 histidine triad nucleotide binding protein 3 ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955436 7254572 7265936 + 102004515 AGCD01033704;GBDF01126114;XM_005389161 XP_005389218 MODEL 8769456 protein-coding Acsl5 acyl-CoA synthetase long chain family member 5 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Diarrhea 13 (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955431 17477113 17524539 + 102028782 AGCD01030408;GBDF01124690;XM_005387762;XM_005387763;XM_005387764 XP_005387819;XP_005387820;XP_005387821 MODEL 8721043 ncrna LOC102009858 uncharacterized LOC102009858 NW_004955426 4649998 4654801 + 102009858 AGCD01026105;GBDF01248724;XR_261189 MODEL 8774104 protein-coding Gsc goosecoid homeobox ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); dorsal/ventral neural tube patterning (ortholog); ear development (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Short Stature, Auditory Canal Atresia, Mandibular Hypoplasia, Skeletal Abnormalities (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); transcription regulator complex (ortholog) NW_004955438 17653149 17655091 + 102019434 AGCD01035447;GBDI01295671;XM_005390387 XP_005390444 MODEL 8704375 protein-coding Ccar2 cell cycle and apoptosis regulator 2 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN mitochondrial fragmentation involved in apoptotic process (ortholog); negative regulation of catalytic activity (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH Wallerian Degeneration (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); DBIRD complex (ortholog) NW_004955403 46027997 46042154 + 102013241 AGCD01002849;GBDF01085278;XM_005373683;XM_005373684;XM_005373685 XP_005373740;XP_005373741;XP_005373742 MODEL 8975972 pseudo LOC102005070 olfactory receptor 5D18-like NW_004955511 636613 637572 + 102005070 AGCD01066336 MODEL 8991411 protein-coding Chp1 calcineurin like EF-hand protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); kinase binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); intracellular sodium ion homeostasis (ortholog); membrane docking (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cation-transporting ATPase complex (ortholog); cytoplasm (ortholog); endomembrane system (ortholog) NW_004955416 8090034 8131605 + 102004381 AGCD01017028;AGCD01017029;AGCD01017030;AGCD01017031;GBDF01003296;XM_013512484 XP_013367938 MODEL 9032463 protein-coding Iapp islet amyloid polypeptide ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); lipid binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); amylin receptor 2 signaling pathway (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); gastric ulcer (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN extracellular region (ortholog); inclusion body (ortholog); neuronal cell body (ortholog) NW_004955413 16834940 16841071 - 102016040 AGCD01014117;XM_013511653 XP_013367107 MODEL 8995988 protein-coding Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 ENCODES a protein that exhibits magnesium ion transmembrane transporter activity (ortholog); sodium ion transmembrane transporter activity (ortholog); INVOLVED IN enamel mineralization (ortholog); intracellular monoatomic cation homeostasis (ortholog); magnesium ion homeostasis (ortholog); ASSOCIATED WITH Amaurosis Hypertrichosis (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955470 4131348 4177172 + 102022689 AGCD01052721;AGCD01052722;AGCD01052723;AGCD01052724;AGCD01052725;AGCD01052726;AGCD01052727;GBBH01194040;GBDK01116667;XM_005400681;XM_005400682;XM_013522740;XM_013522741;XM_013522742;XM_013522743;XM_013522744 XP_005400738;XP_005400739;XP_013378194;XP_013378195;XP_013378196;XP_013378197;XP_013378198 MODEL 8858390 protein-coding Adgrg3 adhesion G protein-coupled receptor G3 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); B cell differentiation (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955433 15290538 15317020 + 102003270 AGCD01031751;GBBH01016106;XM_005388403;XM_013516175;XM_013516176;XM_013516177 XP_005388460;XP_013371629;XP_013371630;XP_013371631 MODEL 8999499 ncrna LOC102011827 uncharacterized LOC102011827 NW_004955592 446843 448929 - 102011827 AGCD01076315;GBCC01022945;XR_265138 MODEL 9065153 protein-coding Camsap3 calmodulin regulated spectrin associated protein family member 3 ENCODES a protein that exhibits actin filament binding (ortholog); microtubule minus-end binding (ortholog); INVOLVED IN cilium movement (ortholog); embryo development ending in birth or egg hatching (ortholog); epithelial cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955563 1639369 1648826 - 102016207 AGCD01074154;AGCD01074155;GBCE01131503;GBDF01220733;XM_013509146 XP_013364600 MODEL 8904270 protein-coding Ginm1 glycosylated integral membrane protein 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); lung squamous cell carcinoma (ortholog) NW_004955439 11661013 11688004 - 102025289 AGCD01035917;AGCD01035918;AGCD01035919;GBCQ01062223;XM_013517382 XP_013372836 MODEL 8849903 protein-coding Cldn18 claudin 18 INVOLVED IN cellular response to estrogen stimulus (ortholog); digestive tract development (ortholog); epithelial cell proliferation (ortholog); ASSOCIATED WITH asthma (ortholog); clear cell renal cell carcinoma (ortholog); megacolon (ortholog); FOUND IN cell-cell junction (ortholog); lateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955501 962188 991922 - 102011135 AGCD01064043;GBDK01013094;XM_005406751;XM_005406752 XP_005406808;XP_005406809 MODEL 39132529 rrna 5S_rRNA 5S ribosomal RNA 8780783 protein-coding C1s complement C1s ENCODES a protein that exhibits identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); glial cell differentiation (ortholog); protein maturation (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); autoimmune hepatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); extracellular region (ortholog) NW_004955413 4620450 4630860 + 102011424 AGCD01013621;GBDF01017372;XM_005378855 XP_005378912 MODEL 39131645 rrna 5S_rRNA 5S ribosomal RNA 10218039 ncrna LOC106149998 uncharacterized LOC106149998 NW_004955460 9778126 9783630 - 106149998 AGCD01048551;XR_001236508 MODEL 8852591 protein-coding Lnpep leucyl and cystinyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); neuropeptide catabolic process (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; long term potentiation; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle membrane (ortholog); insulin-responsive compartment (ortholog) NW_004955418 15631703 15718711 - 102009282 AGCD01019109;AGCD01019110;AGCD01019111;GBBH01187295;XM_005382222 XP_005382279 MODEL 8715665 protein-coding Dcp2 decapping mRNA 2 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); mRNA catabolic process (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog); P-body (ortholog) NW_004955408 32868184 32923788 + 102018473 AGCD01008857;AGCD01008858;GBDF01250860;XM_005376510;XM_013506864 XP_005376567;XP_013362318 MODEL 9065638 protein-coding LOC102008710 olfactory receptor 8B4-like NW_004955412 25399638 25400570 - 102008710 AGCD01013151;XM_005378422 XP_005378479 MODEL 8768844 protein-coding Kat5 lysine acetyltransferase 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); breast cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955422 19557498 19565044 - 102029638 AGCD01023019;GBCE01096942;XM_005384464;XM_005384465;XM_005384466;XM_005384467;XM_013513854 XP_005384521;XP_005384522;XP_005384523;XP_005384524;XP_013369308 MODEL 8908232 protein-coding Ap1b1 adaptor related protein complex 1 subunit beta 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); synaptic vesicle (ortholog) NW_004955455 3632053 3686007 - 102005560 AGCD01045642;AGCD01045643;GBCQ01034259;XM_005396205;XM_005396206;XM_005396207;XM_005396208;XM_013520456 XP_005396262;XP_005396263;XP_005396264;XP_005396265;XP_013375910 MODEL 8880568 protein-coding Aimp1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 ENCODES a protein that exhibits cytokine activity (ortholog); GTPase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cell-cell signaling (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cell surface (ortholog); cytosol (ortholog) NW_004955496 3073480 3108012 - 102008238 AGCD01062280;AGCD01062281;GBBH01115746;XM_005406219;XM_005406220 XP_005406276;XP_005406277 MODEL 8992318 ncrna LOC102005756 uncharacterized LOC102005756 NW_004955402 5429973 5443199 - 102005756 AGCD01000135;XR_001236384;XR_259029 MODEL 8776917 protein-coding Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ENCODES a protein that exhibits identical protein binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); linear polyubiquitin binding (ortholog); INVOLVED IN anoikis (ortholog); B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN FasL mediated signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); anemia (ortholog); Behcet's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); IkappaB kinase complex (ortholog) NW_004955580 1053823 1069802 + 102006084 AGCD01075642;AGCD01075643;GBDI01021108;XM_005414210;XM_005414211;XM_005414213;XM_005414214;XM_013509705;XM_013509706 XP_005414267;XP_005414268;XP_005414270;XP_005414271;XP_013365159;XP_013365160 MODEL 8900586 trna Trnap-agg transfer RNA proline (anticodon AGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978806 AGCD01015187;AGCD01037806;AGCD01049336;AGCD01056483;AGCD01057606;AGCD01072566 MODEL 8832104 protein-coding Bclaf3 BCLAF1 and THRAP3 family member 3 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); positive regulation of stem cell population maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955509 383083 435163 - 102004624 AGCD01065931;AGCD01065932;GBDK01028165;XM_005407799;XM_005407800;XM_005407801;XM_013506297;XM_013506298;XM_013506299 XP_005407856;XP_005407857;XP_005407858;XP_013361751;XP_013361752;XP_013361753 MODEL 8755491 protein-coding Fgd5 FYVE, RhoGEF and PH domain containing 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955429 17297123 17367365 + 102008443 AGCD01028850;AGCD01028851;AGCD01028852;AGCD01028853;GBDK01396571;XM_013515358 XP_013370812 MODEL 9014751 protein-coding Efcab12 EF-hand calcium binding domain 12 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); colon adenocarcinoma (ortholog) NW_004955429 17870292 17877846 + 102015033 AGCD01028868;GBBH01141216;GBDI01225653;XM_005387094 XP_005387151 MODEL 8763464 protein-coding Ampd2 adenosine monophosphate deaminase 2 ENCODES a protein that exhibits AMP deaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN AMP metabolic process (ortholog); ATP metabolic process (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog) NW_004955435 13029377 13040972 + 102007268 AGCD01033177;GBBH01116793;XM_005388885;XM_013516433;XM_013516434;XM_013516435 XP_005388942;XP_013371887;XP_013371888;XP_013371889 MODEL 8712673 protein-coding LOC102010643 leukocyte immunoglobulin-like receptor subfamily A member 3 NW_004955567 1316802 1426452 - 102010643 AGCD01074467;AGCD01074468;AGCD01074469;AGCD01074470;AGCD01074471;AGCD01074472;AGCD01074473;AGCD01074474;AGCD01074475;AGCD01074476;XM_013509260 XP_013364714 MODEL 8844796 protein-coding Haus7 HAUS augmin like complex subunit 7 ENCODES a protein that exhibits thioesterase binding (ortholog); INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) NW_004955580 210799 230450 - 102009776 AGCD01075591;AGCD01075592;GBDJ01388638;XM_005414116;XM_013509715 XP_005414173;XP_013365169 MODEL 8995928 pseudo LOC102017887 small nuclear ribonucleoprotein Sm D2 pseudogene NW_004955422 19113364 19114426 + 102017887 AGCD01022978 MODEL 9001350 protein-coding C2 complement C2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, classical pathway (ortholog); ASSOCIATED WITH age related macular degeneration 14 (ortholog); Alzheimer's disease (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN cell surface (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); symbiont cell surface (ortholog) NW_004955437 449171 460898 + 102004317 AGCD01034137;GBCE01029038;XM_005389395 XP_005389452 MODEL 8850588 protein-coding LOC102005770 endothelin-converting enzyme-like 1 NW_004955453 3471402 3489839 + 102005770 AGCD01044659;AGCD01044660;AGCD01044661;GBBH01082477;GBDJ01085717;XM_013519999;XM_013520000 XP_013375453;XP_013375454 MODEL 9061448 ncrna LOC102009859 uncharacterized LOC102009859 NW_004955427 7919836 7924927 + 102009859 AGCD01027059;GBDF01303674;XR_001234333;XR_001234334 MODEL 9005317 protein-coding Hip1 huntingtin interacting protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); AP-2 adaptor complex binding (ortholog); clathrin binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); clathrin coat assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955456 14389282 14529317 - 102004457 AGCD01046639;AGCD01046640;GBCQ01095220;XM_005396796;XM_005396797;XM_005396798 XP_005396853;XP_005396854;XP_005396855 MODEL 8818133 protein-coding Kdm1b lysine demethylase 1B ENCODES a protein that exhibits FAD binding (ortholog); FAD-dependent H3K4me/H3K4me3 demethylase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN epigenetic programing of female pronucleus (ortholog); genomic imprinting (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH atrial fibrillation (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955483 8000862 8052486 - 102018602 AGCD01057823;GBCE01175840;GBDF01004261;XM_005403391 XP_005403448 MODEL 39134261 misc_rna 7SK 7SK RNA 8820578 protein-coding Cfap100 cilia and flagella associated protein 100 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN chromosome segregation (ortholog); keratinocyte proliferation (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN ciliary basal body (ortholog); microtubule (ortholog); spindle pole (ortholog) NW_004955421 21652655 21685866 + 102019606 AGCD01022114;AGCD01022115;GBDF01187394;XM_005383833 XP_005383890 MODEL 8881787 protein-coding Nceh1 neutral cholesterol ester hydrolase 1 ENCODES a protein that exhibits phosphate ion binding (ortholog); serine hydrolase activity (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); protein dephosphorylation (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); disease of cellular proliferation (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955420 2666905 2725814 - 102003242 AGCD01020605;AGCD01020606;AGCD01020607;GBCE01007233;XM_005383012;XM_013513556 XP_005383069;XP_013369010 MODEL 9030165 protein-coding LOC102021253 zinc finger protein 426 NW_004955495 883506 889089 - 102021253 AGCD01061658;AGCD01061659;AGCD01061660;GBCE01152430;GBDI01011093;XM_013505048 XP_013360502 MODEL 8917169 protein-coding Epha4 EPH receptor A4 ENCODES a protein that exhibits DH domain binding (ortholog); ephrin receptor activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN adherens junction organization (ortholog); adult walking behavior (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); axonal growth cone (ortholog) NW_004955453 12099800 12240199 + 102026827 AGCD01044828;AGCD01044829;GBBH01055701;XM_005395504 XP_005395561 MODEL 8863283 protein-coding Cd72 CD72 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN negative regulation of B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955472 663451 670890 + 102011304 AGCD01053345;AGCD01053346;GBBH01214301;GBDI01215445;XM_013522955;XM_013522956;XM_013522957 XP_013378409;XP_013378410;XP_013378411 MODEL 8861263 pseudo LOC102003320 UDP-N-acetylhexosamine pyrophosphorylase-like NW_004955460 10516392 10518340 - 102003320 AGCD01048586 MODEL 9066531 protein-coding Cnot1 CCR4-NOT transcription complex subunit 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); molecular adaptor activity (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN miRNA-mediated post-transcriptional gene silencing (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of retinoic acid receptor signaling pathway (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia-mental retardation syndrome 4 (ortholog); anxiety disorder (ortholog); FOUND IN CCR4-NOT complex (ortholog); P-body (ortholog) NW_004955433 15938791 16027547 - 102014389 AGCD01031777;AGCD01031778;AGCD01031779;AGCD01031780;AGCD01031781;AGCD01031782;AGCD01031783;AGCD01031784;GBBH01065305;XM_005388446;XM_005388448;XM_005388449;XM_013516127;XM_013516128;XM_013516129;XM_013516130 XP_005388503;XP_005388505;XP_005388506;XP_013371581;XP_013371582;XP_013371583;XP_013371584 MODEL 9036726 protein-coding Camta1 calmodulin binding transcription activator 1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN neuromuscular process controlling balance (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Arnold-Chiari Malformation (ortholog); astigmatism (ortholog); autistic disorder (ortholog) NW_004955486 5115469 5890028 - 102005940 AGCD01059076;AGCD01059077;AGCD01059078;AGCD01059079;AGCD01059080;AGCD01059081;AGCD01059082;AGCD01059083;AGCD01059084;AGCD01059085;AGCD01059086;AGCD01059087;AGCD01059088;AGCD01059089;AGCD01059090;AGCD01059091;AGCD01059092;AGCD01059093;GBBH01123896;XM_005404071;XM_005404072;XM_005404073 XP_005404128;XP_005404129;XP_005404130 MODEL 8923953 protein-coding Gins1 GINS complex subunit 1 INVOLVED IN DNA replication (ortholog); inner cell mass cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN CMG complex (ortholog); cytoplasm (ortholog); GINS complex (ortholog) NW_004955415 31341021 31363069 + 102012533 AGCD01016674;GBDF01124614;XM_005380994 XP_005381051 MODEL 9064154 protein-coding Cdkn2d cyclin dependent kinase inhibitor 2D ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagic cell death (ortholog); DNA synthesis involved in DNA repair (ortholog); negative regulation of cell cycle G1/S phase transition (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH lung cancer (ortholog); Stomach Neoplasms (ortholog); FOUND IN cyclin D2-CDK4 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955495 1755280 1759125 - 102028209 AGCD01061723;AGCD01061724;GBCB01038555;GBCQ01125616;XM_013505142 XP_013360596 MODEL 8962611 protein-coding LOC102009441 zinc finger protein 211 NW_004955584 469784 476250 + 102009441 AGCD01075942;GBDK01431604;XM_005414361;XM_005414362;XM_005414363;XM_005414365 XP_005414418;XP_005414419;XP_005414420;XP_005414422 MODEL 8781205 ncrna LOC102006132 uncharacterized LOC102006132 NW_004955419 22988158 23031113 - 102006132 AGCD01020311;GBDF01280732;XR_260655 MODEL 8968218 ncrna LOC102012211 uncharacterized LOC102012211 NW_004955422 23635752 23644682 - 102012211 AGCD01023199;GBCQ01013438;XR_260906 MODEL 8876263 protein-coding Copz1 coat protein complex I subunit zeta 1 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN COPI vesicle coat (ortholog) NW_004955458 1569077 1592851 + 102005567 AGCD01047193;GBDF01119095;XM_005397218 XP_005397275 MODEL 8982417 protein-coding Arg2 arginase 2 ENCODES a protein that exhibits arginase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN urea cycle pathway; ASSOCIATED WITH acute kidney failure (ortholog); asthma (ortholog); congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog) NW_004955466 2549557 2577060 - 102010682 AGCD01050744;AGCD01050745;GBCB01001233;XM_005399066 XP_005399123 MODEL 8838886 protein-coding LOC102007223 cystatin-C-like NW_004955415 30634590 30646109 + 102007223 AGCD01016666;GBDI01294913;XM_005380976;XM_013512135 XP_005381033;XP_013367589 MODEL 8906253 protein-coding Azgp1 alpha-2-glycoprotein 1, zinc-binding INVOLVED IN cell adhesion (ortholog); cellular response to insulin stimulus (ortholog); cellular response to magnesium ion (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Cachexia (ortholog); FOUND IN extracellular region (ortholog) NW_004955573 902153 910481 - 102005193 AGCD01075007;GBCQ01093722;XM_005413762;XM_013509496 XP_005413819;XP_013364950 MODEL 10385484 ncrna LOC106147058 uncharacterized LOC106147058 NW_004955514 2646798 2653474 - 106147058 AGCD01067085;GBDI01324427;XR_001231766;XR_001231767 MODEL 8971099 protein-coding Evi5l ecotropic viral integration site 5 like ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955563 1384694 1401107 - 102021183 AGCD01074145;AGCD01074146;GBDK01234997;XM_013509169;XM_013509170;XM_013509171;XM_013509172;XM_013509173 XP_013364623;XP_013364624;XP_013364625;XP_013364626;XP_013364627 MODEL 8988258 protein-coding LOC102007567 uncharacterized LOC102007567 NW_004955494 1182666 1184612 - 102007567 AGCD01061392;GBDI01027077;XM_005405391 XP_005405448 MODEL 8768551 protein-coding Gsc2 goosecoid homeobox 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) NW_004955442 18824187 18825760 + 102017820 AGCD01038020;AGCD01038021;GBCQ01189947;XM_005391872 XP_005391929 MODEL 8792736 protein-coding Ell elongation factor for RNA polymerase II ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN aldosterone signaling pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) NW_004955524 3054296 3094125 + 102023388 AGCD01068853;AGCD01068854;GBDF01009023;XM_005409573 XP_005409630 MODEL 8786384 protein-coding Lnpk lunapark, ER junction formation factor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blood coagulation (ortholog); embryonic digit morphogenesis (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network membrane (ortholog) NW_004955403 20654961 20728173 + 102012266 AGCD01002171;GBDF01144184;XM_005373417;XM_005373418;XM_013512809;XM_013512812;XM_013512816;XM_013512822 XP_005373474;XP_005373475;XP_013368263;XP_013368266;XP_013368270;XP_013368276 MODEL 39131795 rrna 5S_rRNA 5S ribosomal RNA 8924439 pseudo LOC102005074 ferritin heavy chain-like NW_004955515 5069307 5090074 - 102005074 AGCD01067337 MODEL 8848247 protein-coding Ccbe1 collagen and calcium binding EGF domains 1 ENCODES a protein that exhibits collagen binding (ortholog); protease binding (ortholog); INVOLVED IN lung development (ortholog); lymph vessel development (ortholog); lymphangiogenesis (ortholog); ASSOCIATED WITH bronchopulmonary dysplasia (ortholog); cervical cancer (ortholog); Facies (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955402 43551810 43819731 - 102014847 AGCD01001073;AGCD01001074;AGCD01001075;AGCD01001076;AGCD01001077;AGCD01001078;AGCD01001079;AGCD01001080;GBDJ01234822;XM_005373004;XM_013511096 XP_005373061;XP_013366550 MODEL 8888205 protein-coding Chp2 calcineurin like EF-hand protein 2 ENCODES a protein that exhibits calcium ion binding (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH melanoma (ortholog); thymoma (ortholog); FOUND IN cation-transporting ATPase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955493 2278494 2281125 + 102015021 AGCD01060943;GBCE01072558;GBDF01158981;XM_005405340 XP_005405397 MODEL 8826392 protein-coding Dcph1 damage control phosphatase 1 ENCODES a protein that exhibits enzyme binding (ortholog); fructose 6-phosphate aldolase activity (ortholog); fructose-1-phosphatase activity (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog) NW_004955439 10136393 10151178 - 102003178 AGCD01035857;AGCD01035858;GBCQ01032562;XM_005390582 XP_005390639 MODEL 8748846 protein-coding Kat6a lysine acetyltransferase 6A ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); cellular senescence (ortholog); embryonic hemopoiesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); anxiety disorder (ortholog); FOUND IN MOZ/MORF histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955536 900198 1015520 + 102010091 AGCD01070744;AGCD01070745;AGCD01070746;AGCD01070747;GBBH01177589;XM_005410512;XM_005410513 XP_005410569;XP_005410570 MODEL 8778406 protein-coding Ap1g1 adaptor related protein complex 1 subunit gamma 1 ENCODES a protein that exhibits collagen binding (ortholog); GTP-dependent protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN endosome to melanosome transport (ortholog); Golgi to lysosome transport (ortholog); positive regulation of natural killer cell degranulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955484 4430461 4511368 - 102013831 AGCD01058215;AGCD01058216;GBCE01153713;XM_005403516;XM_005403517;XM_013503973;XM_013503974 XP_005403573;XP_005403574;XP_013359427;XP_013359428 MODEL 39131646 rrna 5S_rRNA 5S ribosomal RNA 8880653 protein-coding Cldn19 claudin 19 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); apical junction assembly (ortholog); cell junction assembly (ortholog); ASSOCIATED WITH body dysmorphic disorder (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical junction complex (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955537 2265711 2271096 - 102014606 AGCD01070921;GBCQ01010369;XM_005410615;XM_005410616 XP_005410672;XP_005410673 MODEL 39132538 rrna 5S_rRNA 5S ribosomal RNA 9042075 protein-coding LOC102021257 olfactory receptor 7A10-like NW_004955495 8472724 8479391 + 102021257 AGCD01062211;XM_005406179 XP_005406236 MODEL 10208793 ncrna LOC106149999 uncharacterized LOC106149999 NW_004955460 10259974 10263661 - 106149999 AGCD01048576;GBCE01142022;XR_001236509 MODEL 8865248 protein-coding Acsl6 acyl-CoA synthetase long chain family member 6 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); enzyme binding (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955408 3336214 3391117 - 102024427 AGCD01008053;AGCD01008054;AGCD01008055;GBCB01026326;XM_005376085;XM_005376086;XM_005376087;XM_005376089;XM_005376090;XM_005376091;XM_005376093;XM_013508247 XP_005376142;XP_005376143;XP_005376144;XP_005376146;XP_005376147;XP_005376148;XP_005376150;XP_013363701 MODEL 8756924 ncrna LOC102017890 uncharacterized LOC102017890 NW_004955424 1228693 1258354 - 102017890 AGCD01024233;AGCD01024234;GBDF01055490;XR_001234151;XR_261022 MODEL 8891467 pseudo LOC102011828 transcription initiation factor TFIID subunit 13 pseudogene NW_004955402 57682424 57682792 + 102011828 AGCD01001507 MODEL 10212720 protein-coding Haus8 HAUS augmin like complex subunit 8 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) NW_004955524 1042643 1042951 + 106147175 AGCD01068733;GBDF01088568;GBDJ01352200;XM_013507279 XP_013362733 MODEL 8887956 ncrna LOC102008711 uncharacterized LOC102008711 NW_004955467 9917224 9927059 + 102008711 AGCD01051535;GBDF01226367;XR_001236854;XR_001236855 MODEL 8788246 protein-coding Iars1 isoleucyl-tRNA synthetase 1 ENCODES a protein that exhibits GTPase binding (ortholog); isoleucine-tRNA ligase activity (ortholog); INVOLVED IN isoleucyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955515 5506064 5558075 + 102030461 AGCD01067359;AGCD01067360;AGCD01067361;GBDF01087321;GBDK01138860;XM_005408918 XP_005408975 MODEL 8779079 ncrna LOC102005772 uncharacterized LOC102005772 NW_004955407 30090339 30104892 - 102005772 AGCD01007625;GBDF01113497;XR_259594 MODEL 8920004 protein-coding Aimp2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of neuron apoptotic process (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955460 13754487 13762726 - 102023783 AGCD01048722;GBDJ01191946;XM_005397896;XM_005397897 XP_005397953;XP_005397954 MODEL 9057720 protein-coding LOC102005760 phosphatidylinositol-binding clathrin assembly protein-like NW_004955594 504817 535099 - 102005760 AGCD01076429;AGCD01076430;AGCD01076431;AGCD01076432;AGCD01076433;AGCD01076434;GBBH01019273;GBCB01101047;XM_005414676;XM_013510002;XM_013510003 XP_005414733;XP_013365456;XP_013365457 MODEL 9045481 protein-coding Adgrg4 adhesion G protein-coupled receptor G4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog) NW_004955489 8690268 8801358 - 102023606 AGCD01060021;XM_005404615 XP_005404672 MODEL 39134262 misc_rna 7SK 7SK RNA 8811717 protein-coding Kdm2a lysine demethylase 2A ENCODES a protein that exhibits histone H3K36 demethylase activity (ortholog); histone H3K36me/H3K36me2 demethylase activity (ortholog); unmethylated CpG binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); double-strand break repair via nonhomologous end joining (ortholog); heart looping (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955422 18201243 18308163 - 102026015 AGCD01022941;AGCD01022942;AGCD01022943;AGCD01022944;GBDI01113489;GBDI01224165;XM_005384357;XM_005384358 XP_005384414;XP_005384415 MODEL 9034251 protein-coding Ikzf1 IKAROS family zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); B cell differentiation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); anal canal squamous cell carcinoma (ortholog); autoimmune thrombocytopenic purpura (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); pericentric heterochromatin (ortholog) NW_004955456 3617988 3721791 - 102029707 AGCD01046278;AGCD01046279;AGCD01046280;GBDJ01115764;XM_005396609;XM_005396610;XM_005396617;XM_013520610;XM_013520611;XM_013520612;XM_013520613;XM_013520614;XM_013520615;XM_013520616;XM_013520617;XM_013520618 XP_005396666;XP_005396667;XP_005396674;XP_013376064;XP_013376065;XP_013376066;XP_013376067;XP_013376068;XP_013376069;XP_013376070;XP_013376071;XP_013376072 MODEL 8862020 protein-coding Fgd6 FYVE, RhoGEF and PH domain containing 6 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955405 31700706 31801992 - 102004554 AGCD01005303;AGCD01005304;AGCD01005305;GBDK01361830;XM_005374483;XM_013518446;XR_001235695 XP_005374540;XP_013373900 MODEL 9063186 protein-coding Cd74 CD74 molecule ENCODES a protein that exhibits amyloid-beta binding (ortholog); CD4 receptor binding (ortholog); cytokine binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955415 4129151 4138336 + 102016470 AGCD01015967;AGCD01015968;GBDI01012603;XM_005380578;XM_005380579 XP_005380635;XP_005380636 MODEL 8898119 protein-coding Efcab14 EF-hand calcium binding domain 14 ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955464 11619010 11653516 + 102012937 AGCD01050160;GBCQ01062683;XM_005398651;XM_005398653;XM_005398654;XM_005398655 XP_005398708;XP_005398710;XP_005398711;XP_005398712 MODEL 8959152 ncrna LOC102004713 uncharacterized LOC102004713 NW_004955485 7094407 7100426 - 102004713 AGCD01058634;GBDI01190651;XR_263916 MODEL 9048829 protein-coding Camta2 calmodulin binding transcription activator 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cardiac muscle hypertrophy in response to stress (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955467 10375017 10391546 - 102022581 AGCD01051561;AGCD01051562;GBBH01118707;XM_005399625;XM_005399626;XM_005399628;XM_005399629;XM_005399630;XM_013522075;XM_013522076 XP_005399682;XP_005399683;XP_005399685;XP_005399686;XP_005399687;XP_013377529;XP_013377530 MODEL 8894546 pseudo LOC102007224 selenide, water dikinase 2-like NW_004955417 15154063 15155323 + 102007224 AGCD01018224 MODEL 8953690 protein-coding LOC102012212 putative DBH-like monooxygenase protein 2 NW_004955494 1292620 1301008 + 102012212 AGCD01061393;GBDF01104482;XM_005405397 XP_005405454 MODEL 39131363 protein-coding C20orf204 chromosome 20 open reading frame 204 8915903 protein-coding Argfx arginine-fifty homeobox ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955427 20965012 20969269 + 102030651 AGCD01027429;GBDF01307515;XM_005386487 XP_005386544 MODEL 8750703 protein-coding Azi2 5-azacytidine induced 2 INVOLVED IN dendritic cell differentiation (ortholog); dendritic cell proliferation (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955430 19802106 19829566 - 102019095 AGCD01029724;GBCQ01066750;GBDI01134580;XM_005387509;XM_005387510;XM_013515642 XP_005387566;XP_005387567;XP_013371096 MODEL 9016047 protein-coding LOC102009861 zinc finger protein 420-like NW_004955429 13414895 13444098 + 102009861 AGCD01028748;AGCD01028749;GBDF01252222;XM_013515503;XM_013515504;XM_013515505;XM_013515506 XP_013370957;XP_013370958;XP_013370959;XP_013370960 MODEL 8725972 ncrna LOC102005075 uncharacterized LOC102005075 NW_004955433 12925114 12937990 - 102005075 AGCD01031673;XR_261590 MODEL 9010550 protein-coding Cfap107 cilia and flagella associated protein 107 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955486 538170 551522 - 102019277 AGCD01058861;GBDF01209065;XM_005403937;XM_013504130;XR_001231094 XP_005403994;XP_013359584 MODEL 8721567 protein-coding Chpf chondroitin polymerizing factor ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrial matrix (ortholog) NW_004955453 13932822 13937587 + 102029261 AGCD01044855;GBCQ01040789;XM_005395509 XP_005395566 MODEL 8730951 protein-coding Ncf1 neutrophil cytosolic factor 1 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular defense response (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); autosomal recessive chronic granulomatous disease 1 (ortholog); autosomal recessive chronic granulomatous disease 2 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955456 13353780 13363956 - 102014744 AGCD01046587;GBDI01081905;XM_005396736 XP_005396793 MODEL 9003770 protein-coding Bco1 beta-carotene oxygenase 1 ENCODES a protein that exhibits beta-carotene 15,15'-dioxygenase activity (ortholog); INVOLVED IN beta-carotene metabolic process (ortholog); carotene catabolic process (ortholog); retinal metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Hypercarotenemia and Vitamin A Deficiency, Autosomal Dominant (ortholog) NW_004955522 3985515 4018116 + 102004509 AGCD01068410;AGCD01068411;AGCD01068412;GBBH01095123;XM_005409358 XP_005409415 MODEL 9046051 protein-coding Cnot10 CCR4-NOT transcription complex subunit 10 PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN CCR4-NOT complex (ortholog) NW_004955421 2807 69254 + 102014366 AGCD01021541;AGCD01021542;GBDF01010599;XM_005383625;XM_005383626;XM_005383627;XM_013513774;XM_013513775 XP_005383682;XP_005383683;XP_005383684;XP_013369228;XP_013369229 MODEL 8952141 ncrna LOC102010644 uncharacterized LOC102010644 NW_004955445 12260606 12264915 + 102010644 AGCD01039746;GBDF01008996;XR_001235639 MODEL 8784321 protein-coding Epha5 EPH receptor A5 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH malignant astrocytoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); cell periphery (ortholog) NW_004955447 7066111 7382046 + 102015063 AGCD01040810;AGCD01040811;AGCD01040812;AGCD01040813;AGCD01040814;AGCD01040815;AGCD01040816;AGCD01040817;AGCD01040818;AGCD01040819;GBCQ01016524;XM_005392842;XM_013518577 XP_005392899;XP_013374031 MODEL 8979723 ncrna LOC102006138 uncharacterized LOC102006138 NW_004955420 26173887 26191360 - 102006138 AGCD01021392;GBDF01207381;XR_001233810;XR_260757 MODEL 8730679 protein-coding Ampd3 adenosine monophosphate deaminase 3 ENCODES a protein that exhibits AMP deaminase activity (ortholog); INVOLVED IN ADP catabolic process (ortholog); ADP metabolic process (ortholog); AMP catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adenosine Monophosphate Deaminase Deficiency (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955414 26073192 26116448 + 102006122 AGCD01015637;AGCD01015638;GBDI01356542;XM_005380277;XM_005380278 XP_005380334;XP_005380335 MODEL 8867819 protein-coding Cdkn3 cyclin dependent kinase inhibitor 3 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955409 9015220 9030983 - 102004248 AGCD01009427;AGCD01009428;GBDF01239346;XM_005376768 XP_005376825 MODEL 8822420 pseudo LOC102007568 calcyclin-binding protein pseudogene NW_004955495 2910765 2911344 - 102007568 AGCD01061810 MODEL 8783653 protein-coding Acsm1 acyl-CoA synthetase medium chain family member 1 ENCODES a protein that exhibits benzoate-CoA ligase activity (ortholog); decanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); PARTICIPATES IN butanoate metabolic pathway; fatty acid beta degradation pathway; valproic acid pharmacokinetics pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955442 4133817 4173932 + 102015458 AGCD01037520;GBDK01191442;XM_005391131;XM_013517947 XP_005391188;XP_013373401 MODEL 8781168 protein-coding Evl Enah/Vasp-like ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); cellular response to type II interferon (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) NW_004955438 21198761 21298657 + 102004644 AGCD01035530;AGCD01035531;AGCD01035532;GBDK01078332;XM_005390426;XM_005390427;XM_005390428 XP_005390483;XP_005390484;XP_005390485 MODEL 9012513 pseudo LOC102011829 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955402 1161682 1162083 - 102011829 AGCD01000049;XM_005373139 MODEL 8959030 protein-coding Ccdc102a coiled-coil domain containing 102A ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955433 15138379 15150041 - 102029548 AGCD01031746;GBBH01114835;GBDF01019045;XM_013516254 XP_013371708 MODEL 8756448 protein-coding Kat7 lysine acetyltransferase 7 ENCODES a protein that exhibits DNA replication origin binding (ortholog); histone acetyltransferase activity (ortholog); histone H3K14 acetyltransferase activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); internal peptidyl-lysine acetylation (ortholog); natural killer cell differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH androgen insensitivity syndrome (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); histone acetyltransferase complex (ortholog); histone H3-K14 acetyltransferase complex (ortholog) NW_004955451 11770201 11802992 - 102021072 AGCD01043364;AGCD01043365;AGCD01043366;GBDK01143318;XM_005394197;XM_005394198 XP_005394254;XP_005394255 MODEL 8851554 protein-coding Copz2 coat protein complex I subunit zeta 2 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN COPI vesicle coat (ortholog) NW_004955451 13121271 13129256 + 102010016 AGCD01043450;GBCB01040035;XM_005394251 XP_005394308 MODEL 8989063 protein-coding Dcps decapping enzyme, scavenger ENCODES a protein that exhibits 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity (ortholog); identical protein binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); mRNA methylguanosine-cap decapping (ortholog); ASSOCIATED WITH Al-Raqad Syndrome (ortholog); Breast Cancer, Familial (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); m7G(5')pppN diphosphatase complex (ortholog) NW_004955412 27326946 27367455 + 102006559 AGCD01013234;AGCD01013235;AGCD01013236;GBDF01121111;XM_005378510 XP_005378567 MODEL 39131647 rrna 5S_rRNA 5S ribosomal RNA 39134263 misc_rna 7SK 7SK RNA 9056474 protein-coding Kdm2b lysine demethylase 2B ENCODES a protein that exhibits histone H3K36 demethylase activity (ortholog); histone H3K36me/H3K36me2 demethylase activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); embryonic camera-type eye morphogenesis (ortholog); forebrain development (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955482 6774021 6885113 + 102013610 AGCD01057416;AGCD01057417;AGCD01057418;AGCD01057419;AGCD01057420;AGCD01057421;AGCD01057422;AGCD01057423;GBBH01117985;XM_005403116;XM_005403117;XM_005403118;XM_005403119;XM_005403120;XM_005403121;XM_005403122;XM_005403124;XM_005403125;XM_005403126;XM_005403127;XM_005403128;XM_005403129;XM_013503691;XM_013503692 XP_005403173;XP_005403174;XP_005403175;XP_005403176;XP_005403177;XP_005403178;XP_005403179;XP_005403181;XP_005403182;XP_005403183;XP_005403184;XP_005403185;XP_005403186;XP_013359145;XP_013359146 MODEL 10209585 ncrna LOC106147059 uncharacterized LOC106147059 NW_004955514 2691466 2693010 - 106147059 AGCD01067085;GBBH01175162;XR_001231768 MODEL 8928808 protein-coding Cldn2 claudin 2 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN calcium-independent cell-cell adhesion (ortholog); cell-cell adhesion (ortholog); innate immune response in mucosa (ortholog); ASSOCIATED WITH AZOOSPERMIA, OBSTRUCTIVE, WITH NEPHROLITHIASIS (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955490 9137157 9180945 - 102021983 AGCD01060306;GBCQ01011511;XM_005404708;XM_005404709;XM_005404710 XP_005404765;XP_005404766;XP_005404767 MODEL 10333698 ncrna LOC106150000 uncharacterized LOC106150000 NW_004955460 9840365 9842792 + 106150000 AGCD01048556;XR_001236510 MODEL 8759476 protein-coding Hip1r huntingtin interacting protein 1 related ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); clathrin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); digestive system development (ortholog); intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); cell cortex (ortholog); clathrin-coated pit (ortholog) NW_004955482 5885807 5896386 - 102028196 AGCD01057356;GBDJ01087807;GBDK01131500;XM_013503574 XP_013359028 MODEL 9046740 protein-coding Ell2 elongation factor for RNA polymerase II 2 INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); transcription elongation factor complex (ortholog) NW_004955418 16615340 16686632 + 102013295 AGCD01019127;AGCD01019128;GBDF01004410;XM_005382233 XP_005382290 MODEL 8989147 protein-coding Lnx1 ligand of numb-protein X 1 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN synapse maturation (ortholog); ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955447 17154026 17265067 + 102010749 AGCD01041114;AGCD01041115;AGCD01041116;GBBH01019203;XM_005392901;XM_005392902;XM_005392903;XM_013518520 XP_005392958;XP_005392959;XP_005392960;XP_013373974 MODEL 9039029 protein-coding LOC102012215 aldose reductase-related protein 2-like NW_004955494 7960872 8029450 - 102012215 AGCD01061559;AGCD01061560;AGCD01061561;AGCD01061562;AGCD01061563;AGCD01061564;AGCD01061565;AGCD01061566;AGCD01061567;AGCD01061568;AGCD01061569;GBBH01186150;XM_013505016 XP_013360470 MODEL 8866196 trna Trnap-cgg transfer RNA proline (anticodon CGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955467;NW_004955442;NW_004955465;NW_004955462 8707836;14202081;13093914;9311560 8707907;14202152;13093985;9311631 +;+;+;- 101978809 AGCD01037806;AGCD01049336;AGCD01050584;AGCD01051466 MODEL 8740336 protein-coding LOC102008712 oxidized low-density lipoprotein receptor 1 NW_004955413 7662314 7721687 + 102008712 AGCD01013828;AGCD01013829;AGCD01013830;GBDF01111532;XM_005378938 XP_005378995 MODEL 8802790 protein-coding LOC102005777 uncharacterized LOC102005777 NW_004955408 35127767 35155131 - 102005777 AGCD01008930;XM_013507575 XP_013363029 MODEL 8940409 protein-coding Azin1 antizyme inhibitor 1 The protein encoded by this gene belongs to the antizyme inhibitor family, which plays a role in cell growth and proliferation by maintaining polyamine homeostasis within the cell. Antizyme inhibitors are homologs of ornithine decarboxylase (ODC, the key enzyme in polyamine biosynthesis) that have lost the ability to decarboxylase ornithine; however, retain the ability to bind to antizymes. Antizymes negatively regulate intracellular polyamine levels by binding to ODC and targeting it for degradation, as well as by inhibiting polyamine uptake. Antizyme inhibitors function as positive regulators of polyamine levels by sequestering antizymes and neutralizing their effect. This gene encodes antizyme inhibitor 1, the first member of this gene family that is ubiquitously expressed, and is localized in the nucleus and cytoplasm. Overexpression of antizyme inhibitor 1 gene has been associated with increased proliferation, cellular transformation and tumorigenesis. Gene knockout studies showed that homozygous mutant mice lacking functional antizyme inhibitor 1 gene died at birth with abnormal liver morphology. [provided by RefSeq, Sep 2014] NW_004955417 27231695 27259564 - 102019802 AGCD01018541;AGCD01018542;AGCD01018543;GBBH01160932;GBCB01040687;GBCC01032994;GBCQ01062120;GBDJ01125891;NM_001291639 NP_001278568 REVIEWED 8884349 protein-coding Iars2 isoleucyl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH acute myeloid leukemia (ortholog); bone structure disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog) NW_004955520 3485816 3521035 - 102024840 AGCD01068103;AGCD01068104;AGCD01068105;GBBH01143287;GBDI01020406;XM_013507032 XP_013362486 MODEL 8841607 protein-coding Ntmt1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 ENCODES a protein that exhibits histone methyltransferase activity (ortholog); N-terminal protein N-methyltransferase activity (ortholog); protein methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); N-terminal peptidyl-alanine trimethylation (ortholog); N-terminal peptidyl-glycine methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955570 1730407 1747813 + 102019546 AGCD01074826;AGCD01074827;AGCD01074828;GBDJ01394132;XM_005413625;XM_005413626;XM_005413627;XM_013509425;XM_013509426 XP_005413682;XP_005413683;XP_005413684;XP_013364879;XP_013364880 MODEL 8760578 protein-coding Aip AHR interacting HSP90 co-chaperone ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); enzyme binding (ortholog); GAF domain binding (ortholog); INVOLVED IN protein localization to mitochondrion (ortholog); protein maturation (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); adenoma (ortholog); asthma (ortholog); FOUND IN aryl hydrocarbon receptor complex (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955422 17997683 18003888 - 102014576 AGCD01022934;GBBH01090969;GBDF01044027;XM_005384314 XP_005384371 MODEL 8972168 pseudo LOC102003321 zinc finger protein 64 homolog NW_004955409 16616488 16619136 + 102003321 AGCD01009731 MODEL 39133550 mirna MIR532 microRNA 532 9020990 protein-coding Ikzf2 IKAROS family zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cochlear outer hair cell electromotile response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN nucleus (ortholog) NW_004955457 2608892 2763036 + 102023666 AGCD01046748;AGCD01046749;GBBH01017109;XM_005396928;XM_005396929;XM_005396930;XM_005396932;XM_013520762;XM_013520763;XM_013520764;XM_013520765;XM_013520766;XM_013520767;XM_013520768;XM_013520769;XM_013520770 XP_005396985;XP_005396986;XP_005396987;XP_005396989;XP_013376216;XP_013376217;XP_013376218;XP_013376219;XP_013376220;XP_013376221;XP_013376222;XP_013376223;XP_013376224 MODEL 8799060 protein-coding Cd79a CD79a molecule ENCODES a protein that exhibits identical protein binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN B cell activation (ortholog); B cell differentiation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 3 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN B cell receptor complex (ortholog); external side of plasma membrane (ortholog); IgM B cell receptor complex (ortholog) NW_004955555 961522 965605 - 102008773 AGCD01073054;GBDI01002239;XM_005412414 XP_005412471 MODEL 8807301 protein-coding Gsdma gasdermin A ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); pyroptotic inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955451 14650342 14663609 + 102006857 AGCD01043565;GBDF01254326;XM_005394337;XM_005394338;XM_013519193;XM_013519194 XP_005394394;XP_005394395;XP_013374647;XP_013374648 MODEL 8930334 protein-coding Fgf1 fibroblast growth factor 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); branch elongation involved in ureteric bud branching (ortholog); cellular response to heat (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); cleft lip (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955415 11151330 11245554 + 102024452 AGCD01016150;AGCD01016151;AGCD01016152;AGCD01016153;AGCD01016154;GBBH01223382;XM_005380699;XM_005380701;XM_005380702;XM_005380703;XM_005380707;XM_013512345;XM_013512346;XM_013512347;XM_013512348 XP_005380756;XP_005380758;XP_005380759;XP_005380760;XP_005380764;XP_013367799;XP_013367800;XP_013367801;XP_013367802 MODEL 39131796 rrna 5S_rRNA 5S ribosomal RNA 10223540 protein-coding LOC106147060 collagen alpha-1(III) chain-like NW_004955514 1492100 1492656 + 106147060 AGCD01067054;GBCQ01059369;GBDK01283995;XM_013506811 XP_013362265 MODEL 8942912 protein-coding LOC102004714 potassium voltage-gated channel subfamily F member 1 NW_004955487 5789494 5793301 + 102004714 AGCD01059347;XM_005404422 XP_005404479 MODEL 8916483 protein-coding Cand1 cullin associated and neddylation dissociated 1 ENCODES a protein that exhibits TBP-class protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of catalytic activity (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN neddylation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955458 13815819 13850007 + 102026947 AGCD01047814;GBBH01119800;GBDF01281171;XM_005397463 XP_005397520 MODEL 39131435 protein-coding C21orf62 chromosome 21 open reading frame 62 9063223 ncrna LOC102017891 uncharacterized LOC102017891 NW_004955424 10729774 10746212 - 102017891 AGCD01024526;GBDK01082355;XR_001234189;XR_001234190;XR_001234191;XR_001234192;XR_001234193;XR_001234194;XR_001234195;XR_001234196;XR_001234197 MODEL 8725824 protein-coding Arglu1 arginine and glutamate rich 1 ENCODES a protein that exhibits pre-mRNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955404 4962000 4980226 + 102026596 AGCD01003302;GBCE01004218;XM_005374018 XP_005374075 MODEL 9014824 protein-coding Havcr1 hepatitis A virus cellular receptor 1 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); virus receptor activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); phagocytosis, engulfment (ortholog); positive regulation of mast cell activation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); Albuminuria (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); cell surface (ortholog) NW_004955408 11047679 11070492 - 102019779 AGCD01008287;AGCD01008288;GBDF01288090;XM_005376581 XP_005376638 MODEL 8876902 protein-coding Gins2 GINS complex subunit 2 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN CMG complex (ortholog); GINS complex (ortholog); nucleus (ortholog) NW_004955541 809079 816807 - 102019106 AGCD01071360;AGCD01071361;GBDF01052450;XM_005410979 XP_005411036 MODEL 8993937 pseudo LOC102005778 small nuclear ribonucleoprotein Sm D1 pseudogene NW_004955458 15135529 15136459 - 102005778 AGCD01047865 MODEL 8780694 protein-coding Chpf2 chondroitin polymerizing factor 2 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955491 5649079 5653158 + 102006586 AGCD01060494;GBDF01155655;XM_005404824 XP_005404881 MODEL 9025974 protein-coding Septin4 septin 4 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); flagellated sperm motility (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Lewy body dementia (ortholog); Parkinson's disease (ortholog); Spermatogenic Failure 99 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasm (ortholog) NW_004955451 4505318 4530387 + 102022448 AGCD01043128;GBDF01047745;XM_005394007;XM_005394008;XM_005394009;XM_005394010;XM_005394011;XM_005394014 XP_005394064;XP_005394065;XP_005394066;XP_005394067;XP_005394068;XP_005394071 MODEL 8959493 protein-coding LOC102021258 uncharacterized LOC102021258 NW_004955498 3334724 3388529 - 102021258 AGCD01062897;AGCD01062898;AGCD01062899;AGCD01062900;XM_005406477 XP_005406534 MODEL 8736408 protein-coding Coq10a coenzyme Q10A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 3878844 3880429 + 102006318 AGCD01047353;GBDI01174975;GBDJ01165173;XM_005397302 XP_005397359 MODEL 39131648 rrna 5S_rRNA 5S ribosomal RNA 8870228 protein-coding Aipl1 AIP like 1 HSP90 co-chaperone ENCODES a protein that exhibits farnesylated protein binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); phototransduction, visible light (ortholog); protein farnesylation (ortholog); ASSOCIATED WITH blindness (ortholog); Eye Abnormalities (ortholog); Fraser syndrome 3 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); photoreceptor inner segment (ortholog) NW_004955467 11952940 11962147 - 102005456 AGCD01051621;XM_005399662 XP_005399719 MODEL 8758771 ncrna LOC102006139 uncharacterized LOC102006139 NW_004955487 380275 384952 - 102006139 AGCD01059217;AGCD01059218;GBDF01221413;XR_263979 MODEL 8902663 protein-coding Dcst1 DC-STAMP domain containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); sperm-egg recognition (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955545 1529926 1545459 + 102022859 AGCD01071859;GBDF01089916;XM_005411560;XM_005411562;XM_005411566 XP_005411617;XP_005411619;XP_005411623 MODEL 8749103 protein-coding Kdm3a lysine demethylase 3A ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9 demethylase activity (ortholog); histone H3K9me/H3K9me2 demethylase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); cellular response to leukemia inhibitory factor (ortholog); formaldehyde biosynthetic process (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 1164384 1218607 - 102017353 AGCD01024232;AGCD01024233;GBBH01007022;XM_005385394;XM_005385395;XM_013514631;XR_001234175;XR_001234176 XP_005385451;XP_005385452;XP_013370085 MODEL 9054182 protein-coding LOC102007228 olfactory receptor 1L8-like NW_004955419 5406757 5407689 - 102007228 AGCD01019806;XM_005382527 XP_005382584 MODEL 8904696 protein-coding Amph amphiphysin ENCODES a protein that exhibits phosphatase binding (ortholog); phospholipid binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN learning (ortholog); positive regulation of endocytosis (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); lung cancer (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955460 4804400 5024312 + 102020771 AGCD01048441;AGCD01048442;AGCD01048443;AGCD01048444;AGCD01048445;AGCD01048446;GBDF01211444;XM_005397735;XM_013521259;XM_013521260 XP_005397792;XP_013376713;XP_013376714 MODEL 8956479 protein-coding Cdnf cerebral dopamine neurotrophic factor ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN developmental process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955429 19586841 19592727 + 102007923 AGCD01028966;GBBH01185948;GBCB01003607;XM_013515373 XP_013370827 MODEL 8818068 protein-coding Hipk1 homeodomain interacting protein kinase 1 INVOLVED IN adherens junction assembly (ortholog); anterior/posterior pattern specification (ortholog); embryonic camera-type eye morphogenesis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955435 17201866 17257371 + 102016512 AGCD01033350;AGCD01033351;AGCD01033352;GBBH01093340;GBDF01002027;XM_013516511 XP_013371965 MODEL 8796808 protein-coding Ell3 elongation factor for RNA polymerase II 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA-templated transcription elongation (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription elongation factor complex (ortholog) NW_004955416 10223213 10226978 - 102011441 AGCD01017119;GBBH01198088;XM_005381405 XP_005381462 MODEL 8970783 protein-coding LOC102009862 olfactory receptor 1440 NW_004955511 3826101 3827067 - 102009862 AGCD01066477;XM_005408060 XP_005408117 MODEL 8932486 protein-coding Dcst2 DC-STAMP domain containing 2 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955545 1518917 1529865 - 102017917 AGCD01071858;AGCD01071859;GBDF01192050;XM_005411539;XM_005411540;XM_013508299;XM_013508301;XM_013508302;XM_013508303;XM_013508304 XP_005411596;XP_005411597;XP_013363753;XP_013363755;XP_013363756;XP_013363757;XP_013363758 MODEL 9043643 protein-coding Lnx2 ligand of numb-protein X 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955497 6948329 6989455 - 102003984 AGCD01062651;GBCC01024593;XM_005406356 XP_005406413 MODEL 8955093 ncrna LOC102005078 uncharacterized LOC102005078 NW_004955526 2723249 2727334 - 102005078 AGCD01069312;GBCQ01078069;XR_264658 MODEL 39132539 rrna 5S_rRNA 5S ribosomal RNA 8932432 protein-coding Acsm2b acyl-CoA synthetase medium chain family member 2B ENCODES a protein that exhibits benzoate-CoA ligase activity (ortholog); decanoate-CoA ligase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955442 4083805 4105324 + 102014950 AGCD01037517;AGCD01037518;AGCD01037519;GBCQ01124686;XM_005391129;XM_005391130 XP_005391186;XP_005391187 MODEL 8924920 ncrna LOC102008719 uncharacterized LOC102008719 NW_004955474 1262389 1267127 - 102008719 AGCD01054244;AGCD01054245;GBDI01098588;XR_263586 MODEL 8832785 protein-coding Ccdc102b coiled-coil domain containing 102B ENCODES a protein that exhibits protein serine/threonine kinase binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN centriole (ortholog) NW_004955402 52377366 52495386 + 102030585 AGCD01001325;AGCD01001326;AGCD01001327;AGCD01001328;AGCD01001329;AGCD01001330;GBDJ01213459;XM_005373045;XM_005373046;XM_005373047;XM_005373048;XM_005373049;XM_013511295 XP_005373102;XP_005373103;XP_005373104;XP_005373105;XP_005373106;XP_013366749 MODEL 8742925 protein-coding Katna1 katanin catalytic subunit A1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); dynein complex binding (ortholog); microtubule binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); intracellular protein localization (ortholog); microtubule bundle formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN axon (ortholog); centriolar satellite (ortholog); centrosome (ortholog) NW_004955439 11620285 11658797 + 102010734 AGCD01035916;AGCD01035917;GBDF01155506;XM_005390601;XM_005390602;XM_005390603;XM_005390604;XM_005390605;XM_005390607 XP_005390658;XP_005390659;XP_005390660;XP_005390661;XP_005390662;XP_005390664 MODEL 8925847 protein-coding Ncf2 neutrophil cytosolic factor 2 ENCODES a protein that exhibits small GTPase binding (ortholog); superoxide-generating NAD(P)H oxidase activity (ortholog); superoxide-generating NADPH oxidase activator activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); positive regulation of blood pressure (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH Acute Otitis Media; Alzheimer's disease (ortholog); autosomal recessive chronic granulomatous disease 2 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 22355717 22384746 - 102026600 AGCD01006157;GBDJ01215355;XM_005375038;XM_013521507 XP_005375095;XP_013376961 MODEL 8904889 protein-coding Kdm4a lysine demethylase 4A ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K36me2/H3K36me3 demethylase activity (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); negative regulation of astrocyte differentiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia areata (ortholog); breast cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955537 3199394 3255945 + 102003693 AGCD01070950;AGCD01070951;AGCD01070952;AGCD01070953;GBDF01304480;XM_005410671;XM_005410672;XM_005410673;XM_005410674;XM_013507751 XP_005410728;XP_005410729;XP_005410730;XP_005410731;XP_013363205 MODEL 9003205 protein-coding Cnot11 CCR4-NOT transcription complex subunit 11 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN CCR4-NOT complex (ortholog) NW_004955470 7036850 7050883 + 102017445 AGCD01052789;AGCD01052790;GBBH01185965;XM_005400760 XP_005400817 MODEL 8957718 protein-coding Bco2 beta-carotene oxygenase 2 ENCODES a protein that exhibits beta,beta-carotene-9',10'-cleaving oxygenase activity (ortholog); oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (ortholog); INVOLVED IN carotene catabolic process (ortholog); carotene metabolic process (ortholog); carotenoid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955412 13838260 13872886 + 102029836 AGCD01012846;GBDF01116400;XM_005378119;XM_013511045 XP_005378176;XP_013366499 MODEL 10320437 protein-coding Fam171a2 family with sequence similarity 171 member A2 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955451 17372032 17376329 - 106149663 AGCD01043745;AGCD01043746;GBDF01127622;GBDK01040818;XM_013519262 XP_013374716 MODEL 8810455 protein-coding LOC102010649 zinc finger protein 134 NW_004955584 442199 447345 + 102010649 AGCD01075941;GBDF01124692;XM_005414366;XM_013509874;XM_013509875 XP_005414423;XP_013365328;XP_013365329 MODEL 39134264 misc_rna 7SK 7SK RNA 10097637 protein-coding LOC106150001 cytohesin-3 NW_004955460 10842860 10843809 - 106150001 AGCD01048619;GBDK01183147;XM_013521143 XP_013376597 MODEL 9002245 ncrna LOC102007578 uncharacterized LOC102007578 NW_004955430 1701824 1706200 - 102007578 AGCD01029131;AGCD01029132;GBDF01156088;XR_001234556 MODEL 8735883 protein-coding Cldn20 claudin 20 FOUND IN plasma membrane (ortholog); tight junction (ortholog) NW_004955439 6923157 6924098 - 102020717 AGCD01035762;XM_005390548 XP_005390605 MODEL 15036847 trna Trnap-ggg transfer RNA proline (anticodon GGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978807 8927276 ncrna LOC102004716 uncharacterized LOC102004716 NW_004955421 23128250 23159410 + 102004716 AGCD01022173;GBDF01053857;XR_001233869;XR_260817 MODEL 8946871 protein-coding Evpl envoplakin INVOLVED IN keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); regulation of antibacterial peptide production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cornified envelope (ortholog); cytosol (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955506 6227488 6246339 + 102007355 AGCD01065403;AGCD01065404;GBDK01022181;XM_005407464 XP_005407521 MODEL 8773577 protein-coding Cfap119 cilia and flagella associated protein 119 INVOLVED IN gene expression (ortholog); single fertilization (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955493 7622564 7627094 - 102017465 AGCD01061206;GBDI01246809;XM_005405267;XM_013504765;XM_013504766;XM_013504767 XP_005405324;XP_013360219;XP_013360220;XP_013360221 MODEL 8835185 protein-coding Azin2 antizyme inhibitor 2 The protein encoded by this gene belongs to the antizyme inhibitor family, which plays a role in cell growth and proliferation by maintaining polyamine homeostasis within the cell. Antizyme inhibitors are homologs of ornithine decarboxylase (ODC, the key enzyme in polyamine biosynthesis) that have lost the ability to decarboxylase ornithine; however, retain the ability to bind to antizymes. Antizymes negatively regulate intracellular polyamine levels by binding to ODC and targeting it for degradation, as well as by inhibiting polyamine uptake. Antizyme inhibitors function as positive regulators of polyamine levels by sequestering antizymes and neutralizing their effect. This gene encodes antizyme inhibitor 2, the second member of this gene family. Like antizyme inhibitor 1, antizyme inhibitor 2 interacts with all 3 antizymes and stimulates ODC activity and polyamine uptake. However, unlike antizyme inhibitor 1, which is ubiquitously expressed and localized in the nucleus and cytoplasm, antizyme inhibitor 2 is predominantly expressed in the brain and testis and localized in the endoplasmic reticulum-golgi intermediate compartment. Recent studies indicate that antizyme inhibitor 2 is also expressed in specific cell types in ovaries, adrenal glands and pancreas, and in mast cells. The exact function of this gene is not known, however, available data suggest its role in cell growth, spermiogenesis, vesicular trafficking and secretion. There has been confusion in literature and databases over the nomenclature of this gene, stemming from an earlier report that a human cDNA clone (identical to ODCp/AZIN2) had arginine decarboxylase (ADC) activity (PMID:14738999). Subsequent studies in human and mouse showed that antizyme inhibitor 2 was devoid of arginine decarboxylase activity (PMID:19956990). [provided by RefSeq, Sep 2014] NW_004955452 11304345 11330370 + 102006306 AGCD01044334;AGCD01044335;GBDF01009198;GBDK01263680;NM_001293750;XM_013519440;XM_013519441 NP_001280679;XP_013374894;XP_013374895 REVIEWED 8845836 protein-coding Cd79b CD79b molecule ENCODES a protein that exhibits identical protein binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 6 (ortholog); FOUND IN B cell receptor complex (ortholog); external side of plasma membrane (ortholog); IgM B cell receptor complex (ortholog) NW_004955478 7909353 7912814 + 102018181 AGCD01055998;GBBH01064543;XM_005402178;XM_005402179 XP_005402235;XP_005402236 MODEL 8971412 protein-coding Ikzf3 IKAROS family zinc finger 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN B cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955451 14483669 14571108 - 102003825 AGCD01043556;AGCD01043557;AGCD01043558;GBDF01181093;XM_013519415;XM_013519416;XM_013519417;XM_013519418 XP_013374869;XP_013374870;XP_013374871;XP_013374872 MODEL 9000542 protein-coding Gngt2 G protein subunit gamma transducin 2 ENCODES a protein that exhibits GTPase activity (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN heterotrimeric G-protein complex (ortholog) NW_004955451 12248916 12252101 + 102027478 AGCD01043380;GBDK01028530;XM_005394219;XM_005394220;XM_013519114 XP_005394276;XP_005394277;XP_013374568 MODEL 8795955 protein-coding Fgf10 fibroblast growth factor 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ formation (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); aplasia of lacrimal and salivary glands (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955446 18163117 18244840 + 102029240 AGCD01040396;GBDF01112025;XM_005392731 XP_005392788 MODEL 9032764 protein-coding Aire autoimmune regulator ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN central tolerance induction to self antigen (ortholog); humoral immune response (ortholog); negative thymic T cell selection (ortholog); ASSOCIATED WITH anemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955407 41157503 41165032 - 102028160 AGCD01007859;GBBH01221976;XM_013505365;XM_013505368;XM_013505371;XM_013505374;XM_013505376 XP_013360819;XP_013360822;XP_013360825;XP_013360828;XP_013360830 MODEL 8756335 protein-coding Cand2 cullin associated and neddylation dissociated 2 (putative) ENCODES a protein that exhibits TBP-class protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955429 17891306 17913961 - 102016733 AGCD01028869;GBCB01000872;XM_013515513;XM_013515514;XM_013515515 XP_013370967;XP_013370968;XP_013370969 MODEL 8721272 pseudo LOC102017894 protein FAM69B-like NW_004955425 7507821 7533856 + 102017894 AGCD01025387 MODEL 9033097 ncrna LOC102012219 uncharacterized LOC102012219 NW_004955495 5440402 5443188 - 102012219 AGCD01062007;GBDF01145786;XR_001231364 MODEL 8936517 protein-coding C2cd2 C2 calcium dependent domain containing 2 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog) NW_004955407 39627435 39665156 + 102021097 AGCD01007832;GBBH01214687;GBDJ01064517;XM_013505230 XP_013360684 MODEL 10263818 pseudo LOC106147061 zinc finger protein 420 pseudogene NW_004955514 1237 4885 - 106147061 AGCD01066991 MODEL 8888424 protein-coding Psmb7 proteasome 20S subunit beta 7 ENCODES a protein that exhibits threonine-type endopeptidase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); coat/hair pigmentation trait (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955419 3706273 3761603 + 102024910 AGCD01019733;GBDF01010387;XM_005382496 XP_005382553 MODEL 8799895 protein-coding Havcr2 hepatitis A virus cellular receptor 2 ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to Gram-positive bacterium (ortholog); macrophage activation involved in immune response (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); cystic fibrosis (ortholog); FOUND IN anchoring junction (ortholog); cell surface (ortholog); early endosome (ortholog) NW_004955408 11289920 11311216 - 102011629 AGCD01008306;GBCE01034226;XM_005376221;XM_005376222 XP_005376278;XP_005376279 MODEL 8725928 protein-coding Arhgap1 Rho GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); negative regulation of endocytic recycling (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 1378426 1395439 + 102003771 AGCD01022457;GBDF01122966;XM_005384008;XM_013514064 XP_005384065;XP_013369518 MODEL 8821885 protein-coding Gins3 GINS complex subunit 3 INVOLVED IN cellular senescence (ortholog); DNA replication (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Meier-Gorlin syndrome 9 (ortholog); FOUND IN CMG complex (ortholog); GINS complex (ortholog); nucleoplasm (ortholog) NW_004955433 15843025 15864942 + 102012353 AGCD01031770;AGCD01031771;AGCD01031772;GBDJ01376801;XM_005388439 XP_005388496 MODEL 8745804 protein-coding Cdo1 cysteine dioxygenase type 1 ENCODES a protein that exhibits cysteine dioxygenase activity (ortholog); ferrous iron binding (ortholog); nickel cation binding (ortholog); INVOLVED IN L-cysteine catabolic process (ortholog); lactation (ortholog); response to amino acid (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytosol (ortholog) NW_004955408 35593981 35605189 - 102024764 AGCD01008957;GBDK01266464;XM_005376528 XP_005376585 MODEL 9009351 protein-coding LOC102002971 butyrophilin subfamily 1 member A1-like NW_004955581 1320018 1344045 + 102002971 AGCD01075730;GBBH01227542;XM_013509756;XM_013509757;XM_013509758;XM_013509759;XM_013509760;XM_013509761;XM_013509762;XR_001232489 XP_013365210;XP_013365211;XP_013365212;XP_013365213;XP_013365214;XP_013365215;XP_013365216 MODEL 8886179 protein-coding LOC102003326 histone H2A type 1-J-like NW_004955465 13124247 13124484 + 102003326 AGCD01050588;XM_005399005 XP_005399062 MODEL 8771225 protein-coding Dcstamp dendrocyte expressed seven transmembrane protein INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to macrophage colony-stimulating factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog) NW_004955417 28156046 28169481 + 102022816 AGCD01018574;GBDK01042204;XM_005381952;XM_013512745 XP_005382009;XP_013368199 MODEL 8920199 protein-coding Acsm3 acyl-CoA synthetase medium chain family member 3 ENCODES a protein that exhibits 2-methylbutanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); hypertension (ortholog); IgA glomerulonephritis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955493 73306 95521 + 102030541 AGCD01060837;AGCD01060838;GBCQ01008878;XM_005405036 XP_005405093 MODEL 9049552 pseudo LOC102005779 unconventional myosin-Va pseudogene NW_004955459 2117974 2121858 - 102005779 AGCD01047982 MODEL 8995761 protein-coding Epha6 EPH receptor A6 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); lung cancer (ortholog) NW_004955407 398415 1220542 - 102012926 AGCD01006740;AGCD01006741;AGCD01006742;AGCD01006743;AGCD01006744;AGCD01006745;AGCD01006746;AGCD01006747;AGCD01006748;AGCD01006749;AGCD01006750;AGCD01006751;AGCD01006752;AGCD01006753;AGCD01006754;AGCD01006755;AGCD01006756;AGCD01006757;AGCD01006758;AGCD01006759;AGCD01006760;AGCD01006761;AGCD01006762;AGCD01006763;AGCD01006764;AGCD01006765;AGCD01006766;AGCD01006767;AGCD01006768;AGCD01006769;AGCD01006770;AGCD01006771;AGCD01006772;AGCD01006773;AGCD01006774;AGCD01006775;AGCD01006776;AGCD01006777;AGCD01006778;AGCD01006779;AGCD01006780;AGCD01006781;AGCD01006782;AGCD01006783;AGCD01006784;AGCD01006785;AGCD01006786;GBCB01033975;XM_005375498;XM_005375499;XM_005375500;XM_013503527 XP_005375555;XP_005375556;XP_005375557;XP_013358981 MODEL 8994391 pseudo LOC102021259 60S ribosomal protein L36 pseudogene NW_004955424 10966934 10977357 + 102021259 AGCD01024536 MODEL 10062672 ncrna LOC106150002 uncharacterized LOC106150002 NW_004955460 8243549 8250894 - 106150002 AGCD01048513;XR_001236512 MODEL 8772410 protein-coding Katnal1 katanin catalytic subunit A1 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule severing ATPase activity (ortholog); INVOLVED IN microtubule severing (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); katanin complex (ortholog) NW_004955431 15534032 15616623 + 102022628 AGCD01030361;AGCD01030362;AGCD01030363;AGCD01030364;GBBH01201058;XM_005387747;XM_005387748;XM_005387749;XM_005387750 XP_005387804;XP_005387805;XP_005387806;XP_005387807 MODEL 9006014 protein-coding Chpt1 choline phosphotransferase 1 ENCODES a protein that exhibits diacylglycerol cholinephosphotransferase activity (ortholog); phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN phosphatidylcholine biosynthetic process (ortholog); platelet activating factor biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Breast Cancer, Familial (ortholog); glycoproteinosis (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955405 37081024 37093798 + 102002990 AGCD01005437;AGCD01005438;GBBH01142824;GBDK01239060;XM_013518716 XP_013374170 MODEL 8990404 protein-coding Coq10b coenzyme Q10B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955403 3080945 3090978 - 102024750 AGCD01001747;GBCB01073806;GBCE01074854;XM_013512067 XP_013367521 MODEL 8739809 protein-coding Cnot12 CCR4-NOT transcription complex subunit 12 ENCODES a protein that exhibits ankyrin repeat binding (ortholog); enzyme binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN adherens junction (ortholog); CCR4-NOT complex (ortholog); cytoplasm (ortholog) NW_004955511 2359581 2378389 - 102029427 AGCD01066399;AGCD01066400;GBCE01031282;XM_013506472;XM_013506473 XP_013361926;XP_013361927 MODEL 39131649 rrna 5S_rRNA 5S ribosomal RNA 8893532 protein-coding Septin5 septin 5 NW_004955442 18361072 18369648 - 102006399 AGCD01038004;GBCE01030386;XM_005391774;XM_013517956;XM_013517957;XM_013517958;XM_013517959;XM_013517960 XP_005391831;XP_013373410;XP_013373411;XP_013373412;XP_013373413;XP_013373414 MODEL 39131797 rrna 5S_rRNA 5S ribosomal RNA 8849684 pseudo LOC102006140 C-Myc-binding protein pseudogene NW_004955488 2573938 2602551 + 102006140 AGCD01059547 MODEL 9013810 protein-coding Kdm4b lysine demethylase 4B ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K9 demethylase activity (ortholog); INVOLVED IN brain development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); autosomal dominant intellectual developmental disorder 65 (ortholog); breast cancer (ortholog); FOUND IN nucleoplasm (ortholog); pericentric heterochromatin (ortholog) NW_004955495 4019066 4101577 - 102029641 AGCD01061894;AGCD01061895;AGCD01061896;GBCB01038901;XM_005405772;XM_005405773;XM_005405774;XM_013505294 XP_005405829;XP_005405830;XP_005405831;XP_013360748 MODEL 8758171 protein-coding LOC102011830 leucine-rich repeat-containing protein 37A3-like NW_004955651 5178 17838 + 102011830 AGCD01077802;AGCD01077803;AGCD01077804;AGCD01077805;AGCD01077806;AGCD01077807;AGCD01077808;GBDF01009797;XM_013510174 XP_013365628 MODEL 8897081 pseudo LOC102007231 ubiquitin-40S ribosomal protein S27a-like NW_004955484 7752603 7753800 - 102007231 AGCD01058345 MODEL 8766639 protein-coding Hipk2 homeodomain interacting protein kinase 2 ENCODES a protein that exhibits DNA binding (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear body (ortholog) NW_004955494 3365826 3554735 + 102024812 AGCD01061472;AGCD01061473;AGCD01061474;AGCD01061475;GBDF01157377;XM_005405432;XM_005405433;XM_005405434;XM_005405436;XM_005405437;XM_013504951;XM_013504952 XP_005405489;XP_005405490;XP_005405491;XP_005405493;XP_005405494;XP_013360405;XP_013360406 MODEL 8867065 protein-coding Ntmt2 N-terminal Xaa-Pro-Lys N-methyltransferase 2 ENCODES a protein that exhibits N-terminal protein N-methyltransferase activity (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955462 6450063 6473919 + 102005679 AGCD01049283;GBCB01076101;XM_005398170 XP_005398227 MODEL 8700307 ncrna LOC102005079 uncharacterized LOC102005079 NW_004955437 3889822 3896136 - 102005079 AGCD01034353;AGCD01034354;GBDF01014278;XR_001235105;XR_001235106;XR_261849;XR_261850 MODEL 39132540 rrna 5S_rRNA 5S ribosomal RNA 8958449 protein-coding LOC102009864 olfactory receptor 4D11-like NW_004955511 3981204 3982139 + 102009864 AGCD01066484;XM_005408268 XP_005408325 MODEL 8755022 protein-coding Arhgap10 Rho GTPase activating protein 10 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog) NW_004955471 2757063 3052565 + 102022381 AGCD01053046;AGCD01053047;AGCD01053048;AGCD01053049;AGCD01053050;AGCD01053051;AGCD01053052;GBDF01214681;XM_013522864 XP_013378318 MODEL 8881773 protein-coding Ncf4 neutrophil cytosolic factor 4 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); superoxide-generating NADPH oxidase activator activity (ortholog); INVOLVED IN superoxide anion generation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); atopic dermatitis (ortholog); autosomal recessive chronic granulomatous disease 3 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome membrane (ortholog) NW_004955413 23388456 23405121 + 102022804 AGCD01014330;GBDJ01348708;XM_005379170;XM_013511618 XP_005379227;XP_013367072 MODEL 8957872 protein-coding LOC102007579 olfactory receptor 5B3-like NW_004955511 3369163 3370107 - 102007579 AGCD01066459;XM_005408264 XP_005408321 MODEL 39131650 rrna 5S_rRNA 5S ribosomal RNA 9037393 trna Trnap-ugg transfer RNA proline (anticodon UGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955530;NW_004955449;NW_004955414;NW_004955442;NW_004955550 133690;1433235;15652077;14208532;1505328 133761;1433306;15652148;14208603;1505399 +;+;+;-;+ 101978808 AGCD01015187;AGCD01037806;AGCD01041800;AGCD01069830;AGCD01072578 MODEL 8788416 ncrna LOC102012223 uncharacterized LOC102012223 NW_004955506 891734 899069 - 102012223 AGCD01065239;AGCD01065240;GBBH01030954;XR_264313 MODEL 8876213 protein-coding Inpp5j inositol polyphosphate-5-phosphatase J ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); dendritic shaft (ortholog); growth cone (ortholog) NW_004955455 5304346 5314432 + 102005008 AGCD01045720;GBDF01023354;XM_013520477;XM_013520478 XP_013375931;XP_013375932 MODEL 8894233 protein-coding Elmo1 engulfment and cell motility 1 ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based process (ortholog); cell motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); guanyl-nucleotide exchange factor complex (ortholog) NW_004955460 6044827 6580770 + 102028385 AGCD01048466;AGCD01048467;AGCD01048468;AGCD01048469;AGCD01048470;AGCD01048471;GBCQ01162510;XM_005397755;XM_013521230;XM_013521231;XM_013521232 XP_005397812;XP_013376684;XP_013376685;XP_013376686 MODEL 8902202 protein-coding LOC102004721 UDP-N-acetylglucosamine transferase subunit ALG13 homolog NW_004955493 8103019 8104261 - 102004721 AGCD01061265;GBDF01238027;XM_005405313 XP_005405370 MODEL 8746899 pseudo LOC102008721 28S ribosomal protein S36, mitochondrial pseudogene NW_004955476 2667352 2667663 - 102008721 AGCD01055231 MODEL 8743533 protein-coding Evx1 even-skipped homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryo development ending in birth or egg hatching (ortholog); interneuron migration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN axon (ortholog); cell body (ortholog) NW_004955410 28939416 28942751 + 102007748 AGCD01011267;XM_005377464 XP_005377521 MODEL 8887057 ncrna LOC102010653 uncharacterized LOC102010653 NW_004955403 10370654 10380440 + 102010653 AGCD01001921;GBDF01176244;XR_001234452;XR_001234453;XR_259166 MODEL 8707790 protein-coding Hax1 HCLS1 associated protein X-1 ENCODES a protein that exhibits interleukin-1 binding (ortholog); protein domain specific binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); granulocyte colony-stimulating factor signaling pathway (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); clathrin-coated vesicle (ortholog) NW_004955545 816789 819667 + 102009107 AGCD01071817;GBBH01119014;XM_005411511;XM_005411512;XM_005411513;XM_005411514 XP_005411568;XP_005411569;XP_005411570;XP_005411571 MODEL 8991054 protein-coding B2m beta-2-microglobulin ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); structural molecule activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class Ib (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular region; cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955416 11205503 11211325 + 102017868 AGCD01017180;AGCD01017181;GBDK01013792;XM_005381424 XP_005381481 MODEL 8791970 protein-coding Gins4 GINS complex subunit 4 INVOLVED IN DNA replication (ortholog); inner cell mass cell proliferation (ortholog); FOUND IN CMG complex (ortholog); cytoplasm (ortholog); GINS complex (ortholog) NW_004955536 1360811 1375691 - 102015047 AGCD01070756;GBDF01159836;XM_005410531;XM_013507727 XP_005410588;XP_013363181 MODEL 39134265 misc_rna 7SK 7SK RNA 9016868 protein-coding Kdm3b lysine demethylase 3B PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955418 2026254 2098223 - 102024338 AGCD01018739;AGCD01018740;GBCE01003081;GBDF01125628;XM_005382340;XM_013512959;XM_013512960;XM_013512961;XM_013512962 XP_005382397;XP_013368413;XP_013368414;XP_013368415;XP_013368416 MODEL 8955270 protein-coding Gnl1 G protein nucleolar 1 INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955583 570573 578423 - 102016115 AGCD01075838;AGCD01075839;GBDI01171462;GBDI01171463;XM_005414308 XP_005414365 MODEL 8791845 protein-coding Epha7 EPH receptor A7 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); chemorepellent activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN brain development (ortholog); branching morphogenesis of a nerve (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955411 19652146 19815418 - 102012295 AGCD01012039;AGCD01012040;AGCD01012041;AGCD01012042;GBCQ01095584;XM_005377770;XM_005377771;XM_005377772;XM_005377773 XP_005377827;XP_005377828;XP_005377829;XP_005377830 MODEL 8775930 protein-coding Cd80 CD80 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of T cell mediated immunity (ortholog); positive regulation of alpha-beta T cell proliferation (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); anti-basement membrane glomerulonephritis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955427 19237251 19274001 - 102019298 AGCD01027362;AGCD01027363;GBDK01125073;XM_005386449;XM_013515216 XP_005386506;XP_013370670 MODEL 8911030 protein-coding Ikzf4 IKAROS family zinc finger 4 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH alopecia areata (ortholog); encephalomyelitis (ortholog); high grade glioma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955458 3589865 3627154 + 102028270 AGCD01047325;AGCD01047326;AGCD01047327;AGCD01047328;GBBH01094526;GBDF01304051;XM_013520979;XM_013520980;XM_013520981;XM_013520982;XM_013520983;XM_013520984;XM_013520985 XP_013376433;XP_013376434;XP_013376435;XP_013376436;XP_013376437;XP_013376438;XP_013376439 MODEL 8861721 pseudo LOC102017895 protein kinase C iota type pseudogene NW_004955501 2865479 2868071 - 102017895 AGCD01064096 MODEL 8923345 protein-coding Cfap126 cilia and flagella associated protein 126 INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog) NW_004955468 13085324 13088022 - 102010466 AGCD01052198;GBDF01043651;XM_005400280;XM_005400281 XP_005400337;XP_005400338 MODEL 8925570 protein-coding Ccdc106 coiled-coil domain containing 106 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955567 699551 703745 - 102012910 AGCD01074425;GBDK01359467;XM_005413289 XP_005413346 MODEL 8847820 protein-coding Fam171b family with sequence similarity 171 member B ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN synapse (ortholog) NW_004955403 11512731 11532550 - 102027708 AGCD01001955;GBCE01021685;GBDJ01372724;XM_013512412;XM_013512415 XP_013367866;XP_013367869 MODEL 8765418 pseudo LOC102002972 uncharacterized LOC102002972 NW_004955449 17868296 17939598 - 102002972 AGCD01042269;AGCD01042270;AGCD01042271;AGCD01042272;AGCD01042273;AGCD01042274;AGCD01042275 MODEL 9003609 protein-coding Acsm4 acyl-CoA synthetase medium chain family member 4 ENCODES a protein that exhibits decanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); fatty-acyl-CoA synthase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955493 6023 31418 + 102028428 AGCD01060835;GBBH01184454;XM_005405028 XP_005405085 MODEL 8964392 protein-coding LOC102024339 E3 ubiquitin-protein ligase TRIM38-like NW_004955483 1042352 1060507 - 102024339 AGCD01057639;GBBH01115170;XM_005403321;XM_005403322;XM_005403323 XP_005403378;XP_005403379;XP_005403380 MODEL 8896681 protein-coding Dct dopachrome tautomerase ENCODES a protein that exhibits dopachrome isomerase activity (ortholog); INVOLVED IN cell development (ortholog); developmental pigmentation (ortholog); eye pigmentation (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH age related macular degeneration 7 (ortholog); Breast Cancer, Familial (ortholog); congenital nystagmus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); melanosome (ortholog) NW_004955404 15359402 15395556 + 102020410 AGCD01003541;AGCD01003542;AGCD01003543;XM_005374234 XP_005374291 MODEL 8917387 pseudo LOC102005781 putative 40S ribosomal protein S26-like 1 NW_004955462 251999 253115 + 102005781 AGCD01049074 MODEL 10277319 ncrna LOC106150003 uncharacterized LOC106150003 NW_004955460 8104434 8107046 + 106150003 AGCD01048512;XR_001236513 MODEL 8701357 protein-coding Chrac1 chromatin accessibility complex subunit 1 INVOLVED IN chromatin remodeling (ortholog); nucleosome assembly (ortholog); regulation of DNA replication (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN pericentric heterochromatin (ortholog) NW_004955461 14184318 14189645 + 102023235 AGCD01049048;GBBH01119368;XM_005398053;XM_013521311 XP_005398110;XP_013376765 MODEL 9002837 protein-coding Katnal2 katanin catalytic subunit A1 like 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament cytoskeleton (ortholog); microtubule (ortholog) NW_004955402 32407994 32490009 + 102005652 AGCD01000823;AGCD01000824;GBBH01219161;XM_005372884;XM_013510496;XM_013510499;XM_013510502 XP_005372941;XP_013365950;XP_013365953;XP_013365956 MODEL 9059263 protein-coding Cldn22 claudin 22 NW_004955403 25480063 25481646 + 102010968 AGCD01002289;GBDI01210680;XM_005373506 XP_005373563 MODEL 8912409 protein-coding Coq2 coenzyme Q2, polyprenyltransferase ENCODES a protein that exhibits 4-hydroxybenzoate polyprenyltransferase activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN glycerol metabolic process (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); brain disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955474 6403409 6422135 + 102029736 AGCD01054475;AGCD01054476;AGCD01054477;GBBH01163425;XM_005415401 XP_005415458 MODEL 8778322 pseudo LOC102011831 nuclear receptor-binding factor 2 pseudogene NW_004957988 521 1128 + 102011831 AGCD01081384 MODEL 8716075 protein-coding B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) ENCODES a protein that exhibits galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity (ortholog); N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955448 11556179 11583556 - 102006843 AGCD01041528;GBCB01129821;GBCE01169869;XM_005393126;XM_005393128;XM_013518678;XM_013518679;XM_013518680 XP_005393183;XP_005393185;XP_013374132;XP_013374133;XP_013374134 MODEL 8981697 protein-coding Fgf11 fibroblast growth factor 11 ASSOCIATED WITH intellectual disability (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955467 9482467 9488992 - 102012941 AGCD01051513;GBDI01383783;XM_005399489;XM_013522234 XP_005399546;XP_013377688 MODEL 8898684 protein-coding C2cd2l C2CD2 like ENCODES a protein that exhibits insulin binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasmic side of apical plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955412 20214915 20232260 + 102026620 AGCD01012997;AGCD01012998;AGCD01012999;GBBH01060462;GBDF01279346;XM_005378305;XM_013511211 XP_005378362;XP_013366665 MODEL 8710499 ncrna LOC102007232 uncharacterized LOC102007232 NW_004955484 9389101 9390143 - 102007232 AGCD01058415;GBDF01039018;XR_001231046 MODEL 8855260 pseudo LOC102007580 protein kinase C iota type pseudogene NW_004955430 14241459 14243053 - 102007580 AGCD01029564 MODEL 10348577 ncrna LOC106147062 uncharacterized LOC106147062 NW_004955514 30315 38953 - 106147062 AGCD01066992;GBCE01179789;XR_001231773 MODEL 8993667 protein-coding Hipk3 homeodomain interacting protein kinase 3 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN mRNA transcription (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of JUN kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955422 12841781 12928194 - 102022088 AGCD01022799;GBDF01002606;XM_005384160;XM_013513979 XP_005384217;XP_013369433 MODEL 8763434 protein-coding LOC102005080 transcription termination factor 3, mitochondrial-like NW_004955536 102197 103480 + 102005080 AGCD01070713;XM_013507725 XP_013363179 MODEL 39132548 rrna 5S_rRNA 5S ribosomal RNA 8949342 pseudo LOC102009866 U2 small nuclear ribonucleoprotein B'' pseudogene NW_004955512 1307791 1314557 + 102009866 AGCD01066638 MODEL 8800425 protein-coding Evx2 even-skipped homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN limb morphogenesis (ortholog); ASSOCIATED WITH Synpolydactyly 1 (ortholog) NW_004955403 20578813 20582409 + 102006198 AGCD01002167;AGCD01002168;XM_005373888 XP_005373945 MODEL 39131799 rrna 5S_rRNA 5S ribosomal RNA 9023820 protein-coding Cnot2 CCR4-NOT transcription complex subunit 2 ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cytoplasmic mRNA processing body assembly (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog) NW_004955405 10451414 10547229 + 102026825 AGCD01004814;AGCD01004815;GBDI01176412;XM_005374306;XM_005374307;XM_005374308;XM_005374309 XP_005374363;XP_005374364;XP_005374365;XP_005374366 MODEL 39134266 misc_rna 7SK 7SK RNA 8723303 protein-coding Kdm4c lysine demethylase 4C ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); blastocyst formation (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); pericentric heterochromatin (ortholog) NW_004955434 10646524 11000589 + 102007806 AGCD01032358;AGCD01032359;AGCD01032360;AGCD01032361;AGCD01032362;AGCD01032363;AGCD01032364;AGCD01032365;AGCD01032366;AGCD01032367;AGCD01032368;AGCD01032369;GBDJ01371221;XM_005388674 XP_005388731 MODEL 8849141 protein-coding Nck1 NCK adaptor protein 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); eukaryotic initiation factor eIF2 binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN actin filament organization (ortholog); antiviral innate immune response (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); cervical cancer (ortholog); nephrotic syndrome (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955501 1867956 1963091 - 102016727 AGCD01064064;AGCD01064065;GBDF01125073;XM_005406775;XM_005406776;XM_005406777;XM_013505795;XM_013505796 XP_005406832;XP_005406833;XP_005406834;XP_013361249;XP_013361250 MODEL 8788464 protein-coding Airim AFG2 interacting ribosome maturation factor INVOLVED IN DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN ATPase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955452 15477253 15486400 - 102013140 AGCD01044486;GBDF01001402;XM_013519696;XM_013519697;XM_013519698 XP_013375150;XP_013375151;XP_013375152 MODEL 39131651 rrna 5S_rRNA 5S ribosomal RNA 8907948 pseudo LOC102023336 40S ribosomal protein S20 pseudogene NW_004955408 21679215 21680621 - 102023336 AGCD01008558 MODEL 8909409 trna Trnaq-cug transfer RNA glutamine (anticodon CUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978823 AGCD01042594;AGCD01050595;AGCD01050600;AGCD01050634;AGCD01051475;AGCD01074498 MODEL 8750669 protein-coding Elmo2 engulfment and cell motility 2 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Epistaxis (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955445 10943838 10982653 + 102018868 AGCD01039680;GBCE01117628;XM_005392377;XM_005392380 XP_005392434;XP_005392437 MODEL 8833200 protein-coding Inpp5k inositol polyphosphate-5-phosphatase K ENCODES a protein that exhibits inositol bisphosphate phosphatase activity (ortholog); inositol trisphosphate phosphatase activity (ortholog); inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cataract (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955481 1651422 1674402 + 102020444 AGCD01056840;AGCD01056841;GBDF01007950;XM_013503399;XM_013503400 XP_013358853;XP_013358854 MODEL 8933519 protein-coding Septin6 septin 6 INVOLVED IN cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); cleavage furrow (ortholog); presynapse (ortholog) NW_004955534 306691 381799 + 102009315 AGCD01070448;GBBH01006609;XM_005410435;XM_005410437;XM_005410438;XM_013507703;XM_013507704;XM_013507705;XM_013507706 XP_005410492;XP_005410494;XP_005410495;XP_013363157;XP_013363158;XP_013363159;XP_013363160 MODEL 8974597 protein-coding Ntn1 netrin 1 INVOLVED IN anterior/posterior axon guidance (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain edema (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basement membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 7795175 7991597 - 102006327 AGCD01051438;AGCD01051439;AGCD01051440;AGCD01051441;AGCD01051442;GBBH01065257;GBCE01000350;XM_005399748 XP_005399805 MODEL 8984525 protein-coding Bcor BCL6 corepressor ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); alveolar rhabdomyosarcoma (ortholog); FOUND IN BCOR complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955566 1412540 1510339 - 102008470 AGCD01074359;AGCD01074360;AGCD01074361;AGCD01074362;AGCD01074363;GBBH01126083;XM_005413277;XM_005413278;XM_005413279;XM_005413280;XM_005413281;XM_013509214;XM_013509215;XM_013509216;XM_013509217 XP_005413334;XP_005413335;XP_005413336;XP_005413337;XP_005413338;XP_013364668;XP_013364669;XP_013364670;XP_013364671 MODEL 8774922 protein-coding LOC102004723 maltase-glucoamylase, intestinal NW_004955494 1407172 1645558 - 102004723 AGCD01061397;AGCD01061398;AGCD01061399;AGCD01061400;AGCD01061401;AGCD01061402;AGCD01061403;AGCD01061404;AGCD01061405;AGCD01061406;AGCD01061407;AGCD01061408;AGCD01061409;AGCD01061410;AGCD01061411;AGCD01061412;AGCD01061413;AGCD01061414;AGCD01061415;AGCD01061416;AGCD01061417;AGCD01061418;AGCD01061419;GBCQ01114150;GBDK01228223;XM_013505005 XP_013360459 MODEL 8907471 protein-coding LOC102003327 uncharacterized LOC102003327 NW_004955466 5485952 5548346 + 102003327 AGCD01050881;AGCD01050882;GBDF01043768;XM_005399132;XM_005399133;XM_005399134;XM_005399135;XM_013522017;XM_013522018 XP_005399189;XP_005399190;XP_005399191;XP_005399192;XP_013377471;XP_013377472 MODEL 10187384 ncrna LOC106147063 uncharacterized LOC106147063 NW_004955408 31085631 31093142 + 106147063 AGCD01008821;XR_001231774 MODEL 9012033 protein-coding LOC102021261 uncharacterized LOC102021261 NW_004955504 891729 893066 + 102021261 AGCD01064831;GBDF01150503;XM_013505867 XP_013361321 MODEL 9057942 ncrna LOC102010654 uncharacterized LOC102010654 NW_004955451 2820724 2842826 + 102010654 AGCD01043023;GBDF01304074;XR_262571 MODEL 8941523 protein-coding LOC102005082 heat shock 70 kDa protein 1B NW_004955437 356898 358735 + 102005082 AGCD01034126;GBBH01030858;GBCB01006678;XM_005390107 XP_005390164 MODEL 9057638 protein-coding Hbb hemoglobin subunit beta ENCODES a protein that exhibits haptoglobin binding (ortholog); hemoglobin alpha binding (ortholog); hemoglobin beta binding (ortholog); INVOLVED IN erythrocyte development (ortholog); glutathione metabolic process (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH acute chest syndrome (ortholog); adult respiratory distress syndrome (ortholog); alpha thalassemia (ortholog); FOUND IN extracellular region (ortholog); haptoglobin-hemoglobin complex (ortholog); hemoglobin complex (ortholog) NW_004955414 21188012 21189363 - 102028849 AGCD01015410;GBBH01000342;XM_005380076 XP_005380133 MODEL 8976032 pseudo LOC102006141 BAG family molecular chaperone regulator 5-like NW_004955492 7211744 7213061 + 102006141 AGCD01060779 MODEL 8720519 protein-coding Gip gastric inhibitory polypeptide ENCODES a protein that exhibits gastric inhibitory polypeptide receptor binding (ortholog); receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); digestive system development (ortholog); ASSOCIATED WITH Anorexia (ortholog); autonomic nervous system disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular region (ortholog); neuronal cell body (ortholog) NW_004955451 12390938 12396599 + 102014635 AGCD01043392;GBDF01099659;XM_005394598 XP_005394655 MODEL 8745259 protein-coding Arhgap11a Rho GTPase activating protein 11A ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955416 1916475 1936404 - 102028413 AGCD01016841;GBDI01338615;XM_005381178;XM_013512665 XP_005381235;XP_013368119 MODEL 9058629 protein-coding Cnot3 CCR4-NOT transcription complex subunit 3 INVOLVED IN determination of left/right symmetry (ortholog); gene expression (ortholog); mRNA catabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN CCR4-NOT complex (ortholog); P-body (ortholog) NW_004955604 109522 122001 - 102013991 AGCD01076863;AGCD01076864;GBDJ01188298;XM_013510090 XP_013365544 MODEL 9009192 protein-coding Psmb8 proteasome 20S subunit beta 8 INVOLVED IN antigen processing and presentation (ortholog); fat cell differentiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN proteasome complex (ortholog); proteasome core complex (ortholog); spermatoproteasome complex (ortholog) NW_004955437 1500477 1504072 - 102022537 AGCD01034212;GBDJ01021170;XM_005389457 XP_005389514 MODEL 8971203 protein-coding Coq3 coenzyme Q3, methyltransferase ENCODES a protein that exhibits 3-demethylubiquinol 3-O-methyltransferase activity (ortholog); 3-demethylubiquinone 3-O-methyltransferase activity (ortholog); O-methyltransferase activity (ortholog); INVOLVED IN glycerol metabolic process (ortholog); methylation (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955411 25243684 25268225 - 102023449 AGCD01012150;AGCD01012151;GBDK01277684;XM_005377802 XP_005377859 MODEL 8798443 protein-coding Epha8 EPH receptor A8 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); High Myopia (ortholog); FOUND IN early endosome membrane (ortholog); neuron projection (ortholog); plasma membrane (ortholog) NW_004955452 2702277 2729161 + 102012603 AGCD01043903;GBDF01242136;XM_013519449;XR_001236014 XP_013374903 MODEL 9064683 protein-coding Cldn23 claudin 23 INVOLVED IN intracellular protein localization (ortholog); tight junction organization (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog) NW_004955463 4740476 4742283 + 102016991 AGCD01049615;GBCE01025230;XM_005398354 XP_005398411 MODEL 8879987 protein-coding Ikzf5 IKAROS family zinc finger 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); disease by infectious agent (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955477 1160183 1177597 - 102024795 AGCD01055503;GBDF01002880;XM_005401953;XM_005401954;XM_005401955;XM_013503085;XM_013503086 XP_005402010;XP_005402011;XP_005402012;XP_013358539;XP_013358540 MODEL 8974849 pseudo LOC102017897 mitochondrial import inner membrane translocase subunit Tim9-like NW_004955506 1117685 1117951 - 102017897 AGCD01065246 MODEL 8769955 protein-coding B3galnt2 beta-1,3-N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); congenital muscular dystrophy-dystroglycanopathy type A11 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955492 4472585 4502704 + 102023273 AGCD01060722;AGCD01060723;GBCB01023657;GBDF01252979;XM_013504679 XP_013360133 MODEL 8955703 protein-coding Fgf12 fibroblast growth factor 12 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); heparin binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH autistic disorder (ortholog); colon adenocarcinoma (ortholog); developmental and epileptic encephalopathy 47 (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955420 15783184 16310743 + 102009951 AGCD01020981;AGCD01020982;AGCD01020983;AGCD01020984;AGCD01020985;AGCD01020986;AGCD01020987;AGCD01020988;AGCD01020989;GBDI01270942;XM_005383217;XM_013513605 XP_005383274;XP_013369059 MODEL 8760775 protein-coding Cfap141 cilia and flagella associated protein 141 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955545 752737 754039 - 102022124 AGCD01071815;GBDI01117688;GBDJ01116113;XM_005411745 XP_005411802 MODEL 9029450 protein-coding Ccdc107 coiled-coil domain containing 107 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955472 636633 640198 - 102010051 AGCD01053344;GBDI01070373;XM_005401010 XP_005401067 MODEL 8814689 protein-coding Fam174a family with sequence similarity 174 member A ASSOCIATED WITH cervical cancer (ortholog); Hereditary Neoplastic Syndromes (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955418 12877465 12912096 - 102026640 AGCD01019033;AGCD01019034;GBBH01142848;XM_013513060 XP_013368514 MODEL 8952791 protein-coding Hipk4 homeodomain interacting protein kinase 4 ENCODES a protein that exhibits histone kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); protein autophosphorylation (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); male infertility (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955578 876022 884098 + 102014841 AGCD01075500;GBDF01043196;XM_005414055;XM_005414056 XP_005414112;XP_005414113 MODEL 9052458 ncrna LOC102002973 uncharacterized LOC102002973 NW_004955402 40884991 40894999 + 102002973 AGCD01001005;XR_259081 MODEL 8998317 pseudo LOC102024342 60S ribosomal protein L17 pseudogene NW_004955484 3330331 3330824 - 102024342 AGCD01058175 MODEL 8912497 ncrna LOC102004725 uncharacterized LOC102004725 NW_004955423 3357252 3371703 + 102004725 AGCD01023511;GBDK01121190;XR_001234108;XR_260946 MODEL 9020602 ncrna LOC102005782 uncharacterized LOC102005782 NW_004955410 28867225 28871620 + 102005782 AGCD01011262;AGCD01011263;GBDJ01369351;XR_259877 MODEL 8795588 protein-coding Dctd dCMP deaminase ENCODES a protein that exhibits 5-hydroxymethyl-dUMP N-hydrolase activity (ortholog); identical protein binding (ortholog); INVOLVED IN nucleoside salvage (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; gemcitabine pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955403 25825366 25849511 + 102011934 AGCD01002295;GBCB01003249;XM_005373508 XP_005373565 MODEL 10095788 ncrna LOC106150004 uncharacterized LOC106150004 NW_004955460 13302274 13310360 - 106150004 AGCD01048680;XR_001236518 MODEL 8741949 protein-coding Chrd chordin ENCODES a protein that exhibits BMP binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN artery morphogenesis (ortholog); BMP signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955420 23111690 23120038 - 102029405 AGCD01021226;GBBH01113396;GBDJ01402854;XM_013513322;XM_013513323;XM_013513324 XP_013368776;XP_013368777;XP_013368778 MODEL 8925983 protein-coding Katnb1 katanin regulatory subunit B1 ENCODES a protein that exhibits ATPase regulator activity (ortholog); dynein complex binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN microtubule severing (ortholog); negative regulation of microtubule depolymerization (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955433 15345246 15365986 + 102004108 AGCD01031751;AGCD01031752;GBDF01046714;XM_005388406;XM_005388407;XM_005388408 XP_005388463;XP_005388464;XP_005388465 MODEL 8974748 protein-coding Gnl2 G protein nucleolar 2 PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955452 15376289 15401285 - 102012053 AGCD01044486;GBCQ01063721;XM_005395210 XP_005395267 MODEL 8904492 ncrna LOC102006143 uncharacterized LOC102006143 NW_004955493 8176730 8196458 - 102006143 AGCD01061275;AGCD01061276;AGCD01061277;AGCD01061278;AGCD01061279;AGCD01061280;GBDK01245153;XR_001231286;XR_001231287;XR_264097 MODEL 8779211 ncrna LOC102012226 uncharacterized LOC102012226 NW_004955511 1865704 1875638 + 102012226 AGCD01066381;AGCD01066382;GBDF01188738;XR_264414 MODEL 8705060 pseudo LOC102008726 peptidyl-prolyl cis-trans isomerase FKBP11 pseudogene NW_004955481 3772130 3773131 + 102008726 AGCD01056916 MODEL 8741063 protein-coding Vwa2 von Willebrand factor A domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog) NW_004955431 19224373 19274475 + 102016083 AGCD01030445;AGCD01030446;AGCD01030447;GBDI01115147;XM_005387824;XM_005387825;XM_013515834 XP_005387881;XP_005387882;XP_013371288 MODEL 8718196 protein-coding Nck2 NCK adaptor protein 2 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); protein-containing complex binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell migration (ortholog); dendritic spine development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Alzheimer's disease (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); postsynaptic density (ortholog) NW_004955470 10487962 10593046 + 102030183 AGCD01052871;AGCD01052872;GBDF01223303;XM_005400789 XP_005400846 MODEL 8899020 pseudo LOC102007233 THAP domain-containing protein 5 pseudogene NW_004955419 22760508 22761334 - 102007233 AGCD01020307 MODEL 8950258 protein-coding Ajap1 adherens junctions associated protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); negative regulation of wound healing (ortholog); regulation of polarized epithelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955486 7333663 7441686 - 102020570 AGCD01059129;AGCD01059130;AGCD01059131;GBCQ01143431;XM_005404124 XP_005404181 MODEL 8825687 protein-coding Cldn24 claudin 24 FOUND IN apical plasma membrane (ortholog) NW_004955403 25478478 25479173 + 102010657 AGCD01002289;XM_005373505 XP_005373562 MODEL 405822153 mirna MIR539 microRNA 539 9014562 trna Trnaq-uug transfer RNA glutamine (anticodon UUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955465;NW_004955465;NW_004955451 757927;13819250;13329350;12259037 757998;13819321;13329421;12259108 +;+;-;- 101978822 AGCD01043382;AGCD01050600;AGCD01050626;AGCD01057629 MODEL 39132549 rrna 5S_rRNA 5S ribosomal RNA 8996406 pseudo LOC102009870 deoxycytidine kinase-like NW_004955435 5992632 5993789 - 102009870 AGCD01032903 MODEL 8743187 protein-coding LOC102021265 secreted and transmembrane protein 1A NW_004955506 823508 832146 + 102021265 AGCD01065236;AGCD01065237;GBDI01197125;GBDJ01319535;XM_013506143 XP_013361597 MODEL 39131800 rrna 5S_rRNA 5S ribosomal RNA 8956321 protein-coding Ewsr1 EWS RNA binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 3571025 3599975 + 102030274 AGCD01045636;GBDF01002227;XM_005396190;XM_005396191;XM_005396193 XP_005396247;XP_005396248;XP_005396250 MODEL 8791839 protein-coding LOC102011839 keratin-associated protein 7-1 NW_004955407 30545079 30553536 - 102011839 AGCD01007636;GBDF01259648;XM_005375655 XP_005375712 MODEL 8751904 protein-coding Kdm4d lysine demethylase 4D ENCODES a protein that exhibits chromatin DNA binding (ortholog); damaged DNA binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH nephroblastoma (ortholog); FOUND IN nucleus (ortholog); pericentric heterochromatin (ortholog); site of double-strand break (ortholog) NW_004955605 7585 32650 - 102023767 AGCD01076929;GBDF01045317;XM_005414887;XM_013510099;XR_001232568 XP_005414944;XP_013365553 MODEL 8892110 protein-coding C2cd3 C2 domain containing 3 centriole elongation regulator INVOLVED IN brain development (ortholog); centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955414 17444299 17557912 + 102008934 AGCD01015241;AGCD01015242;AGCD01015243;GBDF01118457;XM_013511935;XM_013511936;XM_013511937 XP_013367389;XP_013367390;XP_013367391 MODEL 8702700 protein-coding Coq4 coenzyme Q4 ENCODES a protein that exhibits 4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase activity (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955570 837216 846653 + 102024062 AGCD01074769;GBDJ01131032;XM_005413536 XP_005413593 MODEL 39131652 rrna 5S_rRNA 5S ribosomal RNA 8901654 protein-coding Nckap1 NCK associated protein 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN apical protein localization (ortholog); basal protein localization (ortholog); cell migration involved in gastrulation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN filamentous actin (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) NW_004955403 14476689 14554380 + 102028709 AGCD01002021;AGCD01002022;AGCD01002023;AGCD01002024;AGCD01002025;GBCC01000299;XM_013514746 XP_013370200 MODEL 8938779 protein-coding Elmo3 engulfment and cell motility 3 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog) NW_004955484 9414573 9421255 - 102010808 AGCD01058415;GBDK01048610;XM_005403678;XM_005403679;XM_013503904;XM_013503905 XP_005403735;XP_005403736;XP_013359358;XP_013359359 MODEL 9063594 protein-coding Septin7 septin 7 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); identical protein binding (ortholog); structural constituent of postsynapse (ortholog); INVOLVED IN collateral sprouting (ortholog); cortical cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); axon terminus (ortholog); axoneme (ortholog) NW_004955460 7287452 7374747 - 102005571 AGCD01048480;GBCE01002152;XM_005397770;XM_005397771;XM_013521220 XP_005397827;XP_005397828;XP_013376674 MODEL 8858591 protein-coding Bcorl1 BCL6 corepressor like 1 ASSOCIATED WITH adenoid cystic carcinoma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955473 4990974 5054829 - 102010992 AGCD01053963;AGCD01053964;GBCQ01012577;XM_005401251;XM_005401252;XM_005401253;XM_013523072;XM_013523073;XM_013523074;XM_013523075 XP_005401308;XP_005401309;XP_005401310;XP_013378526;XP_013378527;XP_013378528;XP_013378529 MODEL 9063767 protein-coding LOC102010656 laminin subunit alpha-3-like NW_004955649 79435 83763 - 102010656 AGCD01077784;AGCD01077785;GBDI01289779;GBDJ01229315;XM_013510173 XP_013365627 MODEL 9058948 protein-coding Ccdc110 coiled-coil domain containing 110 ASSOCIATED WITH dilated cardiomyopathy (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955403 23593610 23616959 + 102026278 AGCD01002248;GBCB01008937;XM_005373462 XP_005373519 MODEL 39134267 misc_rna 7SK 7SK RNA 8975288 protein-coding Hbegf heparin binding EGF like growth factor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); cell migration (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); Cardiotoxicity (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955418 259860 321340 + 102005470 AGCD01018670;AGCD01018671;GBDF01303290;XM_005382030;XM_005382031 XP_005382087;XP_005382088 MODEL 8950854 protein-coding Gipc1 GIPC PDZ domain containing family member 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); myosin binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); chemical synaptic transmission (ortholog); endothelial cell migration (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); oculopharyngodistal myopathy 2 (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); cytoplasm (ortholog) NW_004955415 33067689 33077749 - 102016378 AGCD01016748;GBCB01058770;XM_005381102 XP_005381159 MODEL 9032136 protein-coding Arhgap12 Rho GTPase activating protein 12 INVOLVED IN actin filament organization (ortholog); morphogenesis of an epithelial sheet (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN glutamatergic synapse (ortholog); phagocytic cup (ortholog); postsynapse (ortholog) NW_004955429 23452880 23560948 - 102030222 AGCD01029068;AGCD01029069;AGCD01029070;AGCD01029071;AGCD01029072;GBCQ01067381;XM_013515440;XM_013515441;XM_013515442;XM_013515443;XM_013515444 XP_013370894;XP_013370895;XP_013370896;XP_013370897;XP_013370898 MODEL 8799819 pseudo LOC102007581 glutamate dehydrogenase 1, mitochondrial-like NW_004955433 562648 564548 - 102007581 AGCD01031327 MODEL 8850213 ncrna LOC102023337 uncharacterized LOC102023337 NW_004955409 24271717 24309073 - 102023337 AGCD01010080;GBCE01171997;XR_001232657 MODEL 8776800 protein-coding Dctn1 dynactin subunit 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN axonal transport (ortholog); centriole-centriole cohesion (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN mitochondria transport pathway; N-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cell cortex (ortholog); cell leading edge (ortholog); centriolar subdistal appendage (ortholog) NW_004955424 11362240 11413140 + 102028987 AGCD01024564;AGCD01024565;AGCD01024566;GBCQ01014965;XM_005385510;XM_005385512;XM_005385513;XM_005385514;XM_005385515;XM_005385516;XM_013514618;XM_013514619;XM_013514620 XP_005385567;XP_005385569;XP_005385570;XP_005385571;XP_005385572;XP_005385573;XP_013370072;XP_013370073;XP_013370074 MODEL 8726721 ncrna LOC102011840 uncharacterized LOC102011840 NW_004955407 35818286 35827944 - 102011840 AGCD01007751;GBCQ01178585;XR_001231235;XR_001231237;XR_001231238;XR_259614 MODEL 8705394 protein-coding Il10 interleukin 10 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-10 receptor binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); cellular response to antibiotic (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Actinic Cheilitis (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN extracellular region (ortholog); interleukin-10 receptor complex (ortholog) NW_004955406 42307789 42312255 - 102022355 AGCD01006700;GBDJ01151912;XM_005375404 XP_005375461 MODEL 8875763 protein-coding LOC102017899 uncharacterized LOC102017899 NW_004955508 4019743 4057039 - 102017899 AGCD01065855;AGCD01065856;AGCD01065857;AGCD01065858;AGCD01065859;AGCD01065860;GBBH01063497;GBDJ01031312;XM_005407755 XP_005407812 MODEL 9040273 protein-coding Ntn3 netrin 3 ENCODES a protein that exhibits signaling receptor binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955442 14838076 14840857 - 102010740 AGCD01037842;GBCE01183221;XM_013517935 XP_013373389 MODEL 39131653 rrna 5S_rRNA 5S ribosomal RNA 8741987 pseudo LOC102003333 60S ribosomal protein L27 pseudogene NW_004955413 15155101 15155528 + 102003333 AGCD01014066 MODEL 8991270 protein-coding Inppl1 inositol polyphosphate phosphatase like 1 ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN actin filament organization (ortholog); apoptotic process (ortholog); endochondral ossification (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; phosphatidylinositol 3-kinase class I signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN basal plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 19146304 19163923 - 102026208 AGCD01015301;AGCD01015302;GBDF01162302;GBDI01065852;XM_005379991;XM_005379992 XP_005380048;XP_005380049 MODEL 8954932 protein-coding Ajm1 apical junction component 1 homolog ASSOCIATED WITH COVID-19 (ortholog) NW_004955513 4924344 4930850 + 102024602 AGCD01066943;GBCB01015030;XM_005408557;XM_005408558 XP_005408614;XP_005408615 MODEL 9061272 pseudo LOC102002975 L-lactate dehydrogenase A chain pseudogene NW_004955402 36734047 36736688 - 102002975 AGCD01000933 MODEL 8766178 ncrna LOC102005085 uncharacterized LOC102005085 NW_004955442 14237107 14240594 + 102005085 AGCD01037806;GBDF01150434;XR_001235364;XR_262140 MODEL 8701900 ncrna LOC102024345 uncharacterized LOC102024345 NW_004955421 2482992 2490133 - 102024345 AGCD01021630;AGCD01021631;GBDF01236551;XR_260784 MODEL 39131801 rrna 5S_rRNA 5S ribosomal RNA 8989141 ncrna LOC102009882 uncharacterized LOC102009882 NW_004955545 1976556 1983940 - 102009882 AGCD01071876;AGCD01071877;GBDI01212919;XR_001232185 MODEL 8723254 protein-coding Chrdl1 chordin like 1 ENCODES a protein that exhibits BMP binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); BMP signaling pathway (ortholog); cell fate determination (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); megalocornea (ortholog); FOUND IN extracellular region (ortholog) NW_004955490 5108308 5218679 + 102006922 AGCD01060203;GBCE01116210;XM_005404651;XM_005404652;XM_005404653;XM_005404654;XM_013504551;XM_013504552 XP_005404708;XP_005404709;XP_005404710;XP_005404711;XP_013360005;XP_013360006 MODEL 9055542 ncrna LOC102006144 uncharacterized LOC102006144 NW_004955494 945399 951856 - 102006144 AGCD01061388;GBBH01099440;XR_001231328;XR_001231329;XR_001231330 MODEL 39131969 snorna SNORD81 Small nucleolar RNA SNORD81 8864397 protein-coding Gnl3 G protein nucleolar 3 ENCODES a protein that exhibits GTP binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN positive regulation of miRNA transcription (ortholog); positive regulation of protein localization to chromosome, telomeric region (ortholog); positive regulation of protein sumoylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nuclear body (ortholog); nucleolus (ortholog) NW_004955430 2675477 2678113 + 102024599 AGCD01029173;AGCD01029174;GBDJ01230820;GBDJ01230840;XM_013515591 XP_013371045 MODEL 8928785 protein-coding Ephb1 EPH receptor B1 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); protein tyrosine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); camera-type eye morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH aortic dissection (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) NW_004955501 3424112 3821727 - 102020266 AGCD01064105;AGCD01064106;GBDF01113237;XM_005406784 XP_005406841 MODEL 8923059 protein-coding Katnbl1 katanin regulatory subunit B1 like 1 INVOLVED IN cytoplasmic microtubule organization (ortholog); positive regulation of cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN katanin complex (ortholog); mitotic spindle (ortholog); mitotic spindle pole (ortholog) NW_004955416 391335 432806 + 102020561 AGCD01016799;AGCD01016800;AGCD01016801;GBDF01121015;XM_005381160;XM_013512507;XM_013512508 XP_005381217;XP_013367961;XP_013367962 MODEL 8839753 ncrna LOC102008729 uncharacterized LOC102008729 NW_004955419 12989057 12990429 + 102008729 AGCD01019990;GBDF01083945;XR_001233562 MODEL 8834093 protein-coding Psmb9 proteasome 20S subunit beta 9 ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to electrical stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); adult respiratory distress syndrome (ortholog); ankylosing spondylitis (ortholog); FOUND IN cytosol (ortholog); proteasome complex (ortholog); proteasome core complex (ortholog) NW_004955437 1513425 1516164 + 102023191 AGCD01034213;GBBH01002903;GBCB01109043;XM_005389459 XP_005389516 MODEL 8829781 protein-coding Fgf13 fibroblast growth factor 13 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN apoptotic process (ortholog); branching morphogenesis of a nerve (ortholog); cerebral cortex cell migration (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 90 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955489 6122707 6621624 + 102008113 AGCD01059957;AGCD01059958;AGCD01059959;AGCD01059960;AGCD01059961;AGCD01059962;GBCB01043793;XM_005404571;XM_005404572;XM_005404573;XM_013504503 XP_005404628;XP_005404629;XP_005404630;XP_013359957 MODEL 8862130 ncrna LOC102007234 uncharacterized LOC102007234 NW_004955485 7286010 7288361 - 102007234 AGCD01058650;GBBH01030082;XR_263917 MODEL 8931583 protein-coding Acsm5 acyl-CoA synthetase medium chain family member 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955442 4047059 4075158 + 102014397 AGCD01037517;GBCQ01063612;XM_005391127;XM_005391128 XP_005391184;XP_005391185 MODEL 8889639 protein-coding B3galt1 beta-1,3-galactosyltransferase 1 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN glucosylceramide metabolic process (ortholog); oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955449 6452189 7007329 - 102007167 AGCD01041956;AGCD01041957;AGCD01041958;AGCD01041959;AGCD01041960;AGCD01041961;AGCD01041962;AGCD01041963;AGCD01041964;AGCD01041965;AGCD01041966;AGCD01041967;AGCD01041968;GBCB01088572;XM_005393281;XM_005393282;XM_013518796;XR_001235825 XP_005393338;XP_005393339;XP_013374250 MODEL 8714554 protein-coding Coq5 coenzyme Q5, methyltransferase ENCODES a protein that exhibits 2-methoxy-6-polyprenyl-1,4-benzoquinol methyltransferase activity (ortholog); INVOLVED IN methylation (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog); melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955455 11124009 11142665 + 102008820 AGCD01045984;GBDF01251415;XM_005396500;XM_005396501 XP_005396557;XP_005396558 MODEL 8894776 protein-coding Fam174b family with sequence similarity 174 member B INVOLVED IN Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955416 20899846 20926531 - 102016806 AGCD01017472;GBBH01004582;GBDI01071543;XM_005381705;XM_013512628 XP_005381762;XP_013368082 MODEL 8876581 protein-coding Cldn25 claudin 25 FOUND IN apical plasma membrane (ortholog); tight junction (ortholog) NW_004955659 58925 59882 - 102015365 AGCD01077876;GBBH01126086;XM_005415246 XP_005415303 MODEL 39132552 rrna 5S_rRNA 5S ribosomal RNA 9026041 protein-coding Hirip3 HIRA interacting protein 3 ENCODES a protein that exhibits H2A-H2B histone complex chaperone activity (ortholog); INVOLVED IN chromatin organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955493 6964576 6967234 + 102026438 AGCD01061152;GBDF01051809;XM_005405202 XP_005405259 MODEL 9019223 trna Trnar-acg transfer RNA arginine (anticodon ACG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978835 AGCD01010511;AGCD01021398;AGCD01039089;AGCD01050591;AGCD01050597;AGCD01057606;AGCD01057629 MODEL 8713235 protein-coding Nckap1l NCK associated protein 1 like ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase activator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin polymerization-dependent cell motility (ortholog); B cell homeostasis (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955458 1733799 1785591 + 102008293 AGCD01047202;AGCD01047203;AGCD01047204;GBDF01307320;XM_005397228 XP_005397285 MODEL 126903067 mirna MIR542 microRNA 542 9043657 protein-coding LOC102004729 histone-lysine N-methyltransferase PRDM9 NW_004955499 553632 566756 + 102004729 AGCD01063239;AGCD01063240;GBCQ01046889;GBDF01224963;XM_013505574 XP_013361028 MODEL 9044067 pseudo LOC102021266 zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene NW_004955509 31706 32464 + 102021266 AGCD01065925 MODEL 10078125 ncrna LOC106147064 uncharacterized LOC106147064 NW_004955514 5615595 5618348 + 106147064 AGCD01067157;GBCQ01120175;XR_001231776;XR_001231777;XR_001231778 MODEL 8754010 protein-coding Cnot4 CCR4-NOT transcription complex subunit 4 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); regulation of megakaryocyte differentiation (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN CCR4-NOT complex (ortholog) NW_004955494 7190361 7306298 + 102010703 AGCD01061546;AGCD01061547;GBCB01074846;GBDF01086995;XM_005405477 XP_005405534 MODEL 8931996 pseudo LOC102012227 DNA/RNA-binding protein KIN17 pseudogene NW_004955511 978926 980086 + 102012227 AGCD01066350 MODEL 8704337 protein-coding Gipc2 GIPC PDZ domain containing family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); pancreatic adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog) NW_004955423 15113049 15183211 - 102011331 AGCD01023794;AGCD01023795;AGCD01023796;GBDF01156626;XM_013514544;XM_013514545;XM_013514546;XM_013514547;XR_001234123 XP_013369998;XP_013369999;XP_013370000;XP_013370001 MODEL 8713038 protein-coding C2cd4c C2 calcium dependent domain containing 4C FOUND IN cytosol (ortholog) NW_004955495 7236627 7243099 + 102025260 AGCD01062125;GBDF01192259;XM_005406041 XP_005406098 MODEL 8842280 protein-coding Vwa3a von Willebrand factor A domain containing 3A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955493 780808 829768 + 102009069 AGCD01060864;AGCD01060865;GBBH01001724;XM_005405057;XM_005405058;XM_005405059;XM_005405060;XM_005405061;XM_005405062;XM_005405063;XM_005405064;XM_013504833;XM_013504834;XM_013504836;XM_013504837;XM_013504838;XM_013504840;XR_001231282;XR_264065;XR_264066;XR_264067;XR_264068;XR_264069;XR_264070 XP_005405114;XP_005405115;XP_005405116;XP_005405117;XP_005405118;XP_005405119;XP_005405120;XP_005405121;XP_013360287;XP_013360288;XP_013360290;XP_013360291;XP_013360292;XP_013360294 MODEL 9065088 pseudo LOC102007239 40S ribosomal protein S7 pseudogene NW_004955421 17106374 17106961 + 102007239 AGCD01022014 MODEL 8870193 protein-coding Il10ra interleukin 10 receptor subunit alpha ENCODES a protein that exhibits interleukin-10 binding (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN hepatic stellate cell activation (ortholog); interleukin-10-mediated signaling pathway (ortholog); intestinal epithelial structure maintenance (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH cerebral degeneration (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 19182536 19197083 + 102004584 AGCD01012950;GBDK01061604;XM_005378226 XP_005378283 MODEL 9002159 pseudo LOC102005784 SH2B adapter protein 1 pseudogene NW_004955464 13239686 13248332 - 102005784 AGCD01050265;XM_005398719 MODEL 8746831 protein-coding Ins insulin ENCODES a protein that exhibits zinc ion binding; hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN protein hexamerization; acute-phase response (ortholog); alpha-beta T cell activation (ortholog); PARTICIPATES IN altered insulin signaling pathway; forkhead class A signaling pathway; gliclazide pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955422 13909408 13910419 - 102004941 AGCD01022841;AY823469;XM_005384189 AAX33327;XP_005384246 MODEL 9020721 pseudo LOC102010667 60S acidic ribosomal protein P2 pseudogene NW_004955453 8336273 8336716 - 102010667 AGCD01044760;XM_005395716 MODEL 8841831 protein-coding Bcr BCR activator of RhoGEF and GTPase ENCODES a protein that exhibits enzyme binding (ortholog); GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); brain development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955455 7598794 7727386 + 102026502 AGCD01045862;GBDF01188592;GBDI01355626;XM_005396371 XP_005396428 MODEL 8750242 ncrna LOC102007586 uncharacterized LOC102007586 NW_004955435 13055123 13064175 + 102007586 AGCD01033177;GBBH01079921;XR_261684 MODEL 8764163 protein-coding Hbp1 HMG-box transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of lipid transport (ortholog); negative regulation of reactive oxygen species biosynthetic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955410 11626743 11652343 + 102005119 AGCD01010829;AGCD01010830;GBDF01118971;XM_005377281;XM_005377282 XP_005377338;XP_005377339 MODEL 9000119 pseudo LOC102009886 39S ribosomal protein L32, mitochondrial pseudogene NW_004955442 7886469 7887029 + 102009886 AGCD01037628 MODEL 8747701 protein-coding Arhgap15 Rho GTPase activating protein 15 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cell shape (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955440 9591173 10182086 + 102016522 AGCD01036384;AGCD01036385;AGCD01036386;GBCE01021095;XM_005390780;XM_005390781;XM_013517486;XM_013517487 XP_005390837;XP_005390838;XP_013372940;XP_013372941 MODEL 9010601 pseudo LOC102023339 heat shock protein HSP 90-alpha pseudogene NW_004955462 1770313 1790894 - 102023339 AGCD01049132;AGCD01049133;XR_263136 MODEL 8843290 protein-coding Cfap144 cilia and flagella associated protein 144 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); centrosome (ortholog) NW_004955418 29605614 29609806 + 102017660 AGCD01019474;GBDJ01002078;XM_005382326 XP_005382383 MODEL 8763920 ncrna LOC102017904 uncharacterized LOC102017904 NW_004955431 14669607 14678845 - 102017904 AGCD01030337;GBDF01235010;XR_261473 MODEL 9039655 protein-coding LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ENCODES a protein that exhibits calcidiol 1-monooxygenase activity (ortholog); secalciferol 1-monooxygenase activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcitriol biosynthetic process from calciol (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955458 5472404 5477001 - 102011841 AGCD01047494;GBDF01140801;XM_005397416 XP_005397473 MODEL 8858489 protein-coding Hbq1 hemoglobin subunit theta 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955442 17000811 17004033 - 102006290 AGCD01037931;GBBH01050436;XM_005391670;XM_005391671 XP_005391727;XP_005391728 MODEL 10257898 protein-coding LOC106150007 uncharacterized LOC106150007 NW_004955460 8648783 8652074 + 106150007 AGCD01048528;XM_013521208;XR_001236519 XP_013376662 MODEL 8924457 protein-coding Dctn2 dynactin subunit 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); spectrin binding (ortholog); INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); melanosome transport (ortholog); mitotic metaphase chromosome alignment (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); dynactin complex (ortholog) NW_004955458 5247871 5264424 - 102005776 AGCD01047470;GBDF01009997;XM_005397395;XM_005397396;XM_005397397 XP_005397452;XP_005397453;XP_005397454 MODEL 8743958 protein-coding LOC102003334 uncharacterized LOC102003334 NW_004955470 2780581 2789641 + 102003334 AGCD01052682;GBDF01222195;XM_005400615;XM_005400616;XM_005400617;XM_005400618 XP_005400672;XP_005400673;XP_005400674;XP_005400675 MODEL 8858406 protein-coding Septin8 septin 8 ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN regulation of intracellular protein transport (ortholog); regulation of protein stability (ortholog); regulation of SNARE complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); myelin sheath (ortholog); presynapse (ortholog) NW_004955408 4129302 4143683 - 102003838 AGCD01008089;GBCE01094947;GBDK01003639;XM_005376114 XP_005376171 MODEL 8843430 protein-coding B3galt2 beta-1,3-galactosyltransferase 2 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN glucosylceramide metabolic process (ortholog); oligosaccharide biosynthetic process (ortholog) NW_004955406 30603238 30610822 - 102021090 AGCD01006377;GBCE01083240;XM_005375108 XP_005375165 MODEL 8732142 protein-coding Cldn34 claudin 34 NW_004955544 3190014 3190573 + 102009880 AGCD01071750;XM_013508184 XP_013363638 MODEL 8980917 protein-coding Acss1 acyl-CoA synthetase short chain family member 1 ENCODES a protein that exhibits acetyl-CoA synthetase activity (ortholog); propionate-CoA ligase activity (ortholog); INVOLVED IN acetate biosynthetic process (ortholog); acetyl-CoA biosynthetic process (ortholog); propionate biosynthetic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; malonic aciduria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955415 31117542 31154654 - 102009378 AGCD01016669;GBDJ01083439;XM_005380983 XP_005381040 MODEL 8869251 protein-coding LOC102002978 zinc finger protein 14-like NW_004955607 144382 181560 + 102002978 AGCD01076977;GBCB01041249;XM_013510111;XM_013510112;XM_013510113 XP_013365565;XP_013365566;XP_013365567 MODEL 8838809 trna Trnar-ccg transfer RNA arginine (anticodon CCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004957365;NW_004955442;NW_004955465 7;14214277;13880906 79;14214349;13880978 +;-;+ 101978836 AGCD01037806;AGCD01050633;AGCD01080761 MODEL 8966159 protein-coding Hivep1 HIVEP zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); HMG box domain binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955465 2410629 2547889 - 102016900 AGCD01050353;AGCD01050354;GBDK01322567;XM_005398821;XM_013521851;XM_013521852;XM_013521853 XP_005398878;XP_013377305;XP_013377306;XP_013377307 MODEL 39134268 misc_rna 7SK 7SK RNA 8903192 pseudo LOC102024346 UPF0538 protein C2orf76 homolog pseudogene NW_004955489 2537117 2537685 + 102024346 AGCD01059871;XM_005404539 MODEL 9025864 protein-coding Kdm5a lysine demethylase 5A ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); facultative heterochromatin formation (ortholog); male gonad development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia areata (ortholog); ankylosing spondylitis (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955454 6774308 6865047 + 102016233 AGCD01045268;AGCD01045269;AGCD01045270;AGCD01045271;GBDF01221368;XM_005396019;XM_005396020;XM_013520162;XM_013520163;XM_013520164 XP_005396076;XP_005396077;XP_013375616;XP_013375617;XP_013375618 MODEL 9003786 pseudo LOC102006151 cyclin-dependent-like kinase 5 pseudogene NW_004955503 2378754 2379747 - 102006151 AGCD01064606 MODEL 8710397 protein-coding Chrdl2 chordin like 2 INVOLVED IN cell differentiation (ortholog); negative regulation of BMP signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955414 16986199 17018166 + 102005586 AGCD01015232;AGCD01015233;GBDJ01311671;XM_005379912;XM_005379913 XP_005379969;XP_005379970 MODEL 8927241 protein-coding Arrdc1 arrestin domain containing 1 ENCODES a protein that exhibits arrestin family protein binding (ortholog); identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN extracellular transport (ortholog); extracellular vesicle biogenesis (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular exosome (ortholog); extracellular vesicle (ortholog) NW_004955513 5479468 5486489 + 102004308 AGCD01066973;GBCB01121940;GBDI01061781;XM_013506657 XP_013362111 MODEL 8924925 pseudo LOC102008732 cytochrome b-c1 complex subunit 7-like NW_004955484 9493540 9493755 - 102008732 AGCD01058418 MODEL 8780748 protein-coding Ephb2 EPH receptor B2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Anorectal Malformations (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955452 2844713 2986790 + 102010660 AGCD01043905;AGCD01043906;AGCD01043907;GBBH01093218;XM_005394747;XM_005394748;XM_013519671 XP_005394804;XP_005394805;XP_013375125 MODEL 8864924 protein-coding Psmc1 proteasome 26S subunit, ATPase 1 ENCODES a protein that exhibits TBP-class protein binding (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); neurodevelopmental disorder with poor growth, spastic tetraplegia, and hearing loss (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) NW_004955438 12705328 12721050 + 102012685 AGCD01035267;GBDF01004856;XM_005390281 XP_005390338 MODEL 8860313 protein-coding Gnl3l G protein nucleolar 3 like INVOLVED IN negative regulation of protein sumoylation (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN nucleolus (ortholog); telomerase holoenzyme complex (ortholog) NW_004955475 1792268 1849601 + 102022913 AGCD01054758;AGCD01054759;AGCD01054760;AGCD01054761;AGCD01054762;AGCD01054763;GBCQ01065541;XM_005401525;XM_013502824 XP_005401582;XP_013358278 MODEL 8732907 protein-coding Katnip katanin interacting protein ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); negative regulation of motile cilium assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); ciliopathy (ortholog); FOUND IN 9+2 motile cilium (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955493 5724550 5915727 + 102008118 AGCD01061075;AGCD01061076;AGCD01061077;AGCD01061078;GBDF01088295;XM_005405142;XM_013504820;XM_013504821;XM_013504822;XM_013504823;XM_013504824;XM_013504825;XM_013504826;XR_001231277 XP_005405199;XP_013360274;XP_013360275;XP_013360276;XP_013360277;XP_013360278;XP_013360279;XP_013360280 MODEL 10196448 ncrna LOC106149219 uncharacterized LOC106149219 NW_004955440 16910790 16912231 - 106149219 AGCD01036543;GBDF01151502;XR_001235247 MODEL 8908656 protein-coding Ajuba ajuba LIM protein ENCODES a protein that exhibits actin filament binding (ortholog); alpha-catenin binding (ortholog); chromatin binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); focal adhesion assembly (ortholog); glycerophospholipid biosynthetic process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955409 37318597 37329068 + 102026082 AGCD01010507;GBDI01220023;XM_005377096 XP_005377153 MODEL 39132558 rrna 5S_rRNA 5S ribosomal RNA 9030752 protein-coding Coq6 coenzyme Q6, monooxygenase ENCODES a protein that exhibits 2-methoxy-6-polyprenolphenol 4-hydroxylase activity (ortholog); 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955523 1444675 1458769 - 102023838 AGCD01068519;GBCQ01090372;XM_005409410;XR_001231919 XP_005409467 MODEL 39131802 rrna 5S_rRNA 5S ribosomal RNA 9052289 protein-coding Ccdc112 coiled-coil domain containing 112 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog) NW_004955408 35052985 35069032 - 102021853 AGCD01008929;GBCB01026249;GBCE01162945;XM_005415358;XM_013506914 XP_005415415;XP_013362368 MODEL 41410900 mirna MIR544A microRNA 544a 8814128 protein-coding LOC102005087 protein phosphatase 1 regulatory subunit 37 NW_004955555 2117438 2165515 + 102005087 AGCD01073130;AGCD01073131;GBBH01124509;XM_005412493;XM_013508759 XP_005412550;XP_013364213 MODEL 8902660 protein-coding LOC102021267 olfactory receptor 5AL1-like NW_004955511 1538367 1539479 + 102021267 AGCD01066371;XM_005408235 XP_005408292 MODEL 8788599 protein-coding Fgf2 fibroblast growth factor 2 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine binding (ortholog); cytokine activity (ortholog); INVOLVED IN angiogenesis involved in coronary vascular morphogenesis (ortholog); behavioral response to ethanol (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN ceric oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Animal Mammary Neoplasms (ortholog); Arteriovenous Fistula (ortholog); FOUND IN extracellular region (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955428 17840554 17894779 - 102017484 AGCD01028052;GBBH01210560;GBCQ01087264;XM_013515320 XP_013370774 MODEL 8977997 protein-coding Insc INSC spindle orientation adaptor protein ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of protein stability (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955414 30181402 30282279 + 102026418 AGCD01015728;AGCD01015729;AGCD01015730;GBCQ01127867;XM_013512094;XM_013512096 XP_013367548;XP_013367550 MODEL 10356932 pseudo LOC106147065 calcium-binding mitochondrial carrier protein Aralar1 pseudogene NW_004955408 32718391 32718634 - 106147065 AGCD01008852 MODEL 8731982 protein-coding LOC102002979 olfactory receptor 4F17-like NW_004955614 313170 316184 - 102002979 AGCD01077239;GBDF01177112;XM_013510137 XP_013365591 MODEL 8809840 ncrna LOC102012234 uncharacterized LOC102012234 NW_004955433 7547240 7568531 + 102012234 AGCD01031573;GBDF01235477;XR_001234708;XR_001234709;XR_001234710 MODEL 8749536 protein-coding Fgf14 fibroblast growth factor 14 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH cartilage disease (ortholog); cognitive disorder (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955404 8704344 9329917 + 102003829 AGCD01003357;AGCD01003358;AGCD01003359;AGCD01003360;AGCD01003361;AGCD01003362;AGCD01003363;AGCD01003364;AGCD01003365;AGCD01003366;AGCD01003367;AGCD01003368;GBDI01238697;XM_005374032;XM_005374033 XP_005374089;XP_005374090 MODEL 8835927 protein-coding Gipc3 GIPC PDZ domain containing family member 3 ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 15 (ortholog); genetic disease (ortholog) NW_004955495 5531374 5536691 + 102003253 AGCD01062010;AGCD01062011;GBBH01075042;GBDK01319308;XM_013505214 XP_013360668 MODEL 10101754 protein-coding C2cd4d C2 calcium dependent domain containing 4D NW_004955589 582261 583519 + 106147595 AGCD01076176;GBDI01079516;XM_013509939 XP_013365393 MODEL 10202549 protein-coding Fam174c family with sequence similarity 174 member C ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955495 6631767 6634282 - 106146226 AGCD01062086;GBDJ01189190;XM_005405980;XM_013505299 XP_005406037;XP_013360753 MODEL 8992158 protein-coding Arhgap17 Rho GTPase activating protein 17 INVOLVED IN actin filament organization (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955493 3326893 3384621 - 102028549 AGCD01060988;AGCD01060989;AGCD01060990;AGCD01060991;GBBH01117744;GBDJ01132148;XM_013504866;XM_013504867;XM_013504868;XM_013504869;XM_013504870 XP_013360320;XP_013360321;XP_013360322;XP_013360323;XP_013360324 MODEL 8858668 protein-coding LOC102011844 cytochrome c oxidase assembly factor 1 homolog INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial complex I intermediate assembly complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955460 182778 285053 + 102011844 AGCD01048337;AGCD01048338;AGCD01048339;GBDF01047278;XM_005397712 XP_005397769 MODEL 8940064 pseudo LOC102005785 pleckstrin homology domain-containing family B member 2 pseudogene NW_004955411 11025058 11025724 + 102005785 AGCD01011800 MODEL 8700011 protein-coding Dctn3 dynactin subunit 3 INVOLVED IN cytoskeleton-dependent cytokinesis (ortholog); dynein-driven meiotic oscillatory nuclear movement (ortholog); microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955472 1511984 1521148 + 102022382 AGCD01053397;AGCD01053398;GBDI01005417;XM_005401050;XM_005401053 XP_005401107;XP_005401110 MODEL 8809822 pseudo LOC102010670 ADP-ribosylation factor-like protein 8B pseudogene NW_004955455 5770199 5771659 - 102010670 AGCD01045751 MODEL 8743752 protein-coding Kazald1 Kazal type serine peptidase inhibitor domain 1 INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) NW_004955485 9131081 9133418 - 102018605 AGCD01058746;GBBH01164469;XM_005403935 XP_005403992 MODEL 10386008 ncrna LOC106149220 uncharacterized LOC106149220 NW_004955440 11150592 11168661 + 106149220 AGCD01036403;XR_001235249 MODEL 39131971 snorna SNORD81 Small nucleolar RNA SNORD81 8893681 ncrna LOC102007596 uncharacterized LOC102007596 NW_004955441 5524667 5614034 - 102007596 AGCD01036879;AGCD01036880;GBDF01251487;XR_262050 MODEL 8714779 protein-coding Ccdc116 coiled-coil domain containing 116 ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955442 17474743 17482389 - 102016317 AGCD01037955;GBDF01021116;XM_005391705;XM_005391707;XM_005391708;XM_013518019 XP_005391762;XP_005391764;XP_005391765;XP_013373473 MODEL 39131654 rrna 5S_rRNA 5S ribosomal RNA 8867077 protein-coding Ntn4 netrin 4 ENCODES a protein that exhibits laminin-1 binding (ortholog); INVOLVED IN neuron remodeling (ortholog); regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN basement membrane (ortholog) NW_004955405 32080022 32182225 - 102006307 AGCD01005326;AGCD01005327;AGCD01005328;GBDI01292870;GBDK01069539;XM_013518478 XP_013373932 MODEL 8709690 protein-coding Kdm5b lysine demethylase 5B ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); histone H3K4 demethylase activity (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); amenorrhea (ortholog); atrial heart septal defect (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) NW_004955406 38755220 38823094 - 102028822 AGCD01006609;AGCD01006610;GBDK01322713;XM_005375227 XP_005375284 MODEL 8868600 ncrna LOC102006153 uncharacterized LOC102006153 NW_004955511 3567813 3569808 - 102006153 AGCD01066468;GBDF01146056;XR_264424 MODEL 8802878 protein-coding LOC102008750 rho GTPase-activating protein 21-like NW_004955503 2090544 2097475 + 102008750 AGCD01064595;AGCD01064596;XM_013505847 XP_013361301 MODEL 8966488 ncrna LOC102007245 uncharacterized LOC102007245 NW_004955495 6585034 6603591 - 102007245 AGCD01062085;GBDF01168574;XR_001231373;XR_264166 MODEL 8806374 protein-coding Chrm1 cholinergic receptor muscarinic 1 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN entrainment of circadian clock (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); neuromuscular synaptic transmission (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH asthma (ortholog); brain ischemia (ortholog); epilepsy (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); cholinergic synapse (ortholog) NW_004955599 349744 356714 + 102004442 AGCD01076640;GBDF01252230;GBDI01253861;XM_013510063 XP_013365517 MODEL 8772465 protein-coding Vwa3b von Willebrand factor A domain containing 3B ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 22 (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955470 4658088 4850277 + 102027837 AGCD01052734;AGCD01052735;AGCD01052736;AGCD01052737;AGCD01052738;AGCD01052739;GBDF01081475;XM_005400699;XM_005400700;XM_005400701;XM_005400703;XM_005400704;XM_005400705;XM_005400706;XM_005400707;XM_013522812 XP_005400756;XP_005400757;XP_005400758;XP_005400760;XP_005400761;XP_005400762;XP_005400763;XP_005400764;XP_013378266 MODEL 8935097 protein-coding Hbs1l HBS1 like translational GTPase INVOLVED IN nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); Dom34-Hbs1 complex (ortholog) NW_004955439 1684466 1762314 + 102003488 AGCD01035625;AGCD01035626;AGCD01035627;GBDF01082932;XM_005390498;XM_013517383 XP_005390555;XP_013372837 MODEL 8763927 protein-coding LOC102017908 metallothionein-1E NW_004955433 14376480 14378539 + 102017908 AGCD01031721;AY533220;GBDF01120895;XM_005388357 AAS59423;XP_005388414 MODEL 8871000 protein-coding Nckap5 NCK associated protein 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); Breast Cancer, Familial (ortholog) NW_004955440 266389 1159224 - 102029122 AGCD01036160;AGCD01036161;AGCD01036162;AGCD01036163;AGCD01036164;AGCD01036165;AGCD01036166;AGCD01036167;AGCD01036168;AGCD01036169;AGCD01036170;AGCD01036171;AGCD01036172;AGCD01036173;AGCD01036174;AGCD01036175;AGCD01036176;GBDK01133273;XM_005390736;XM_013517461;XM_013517462;XM_013517463 XP_005390793;XP_013372915;XP_013372916;XP_013372917 MODEL 8794520 protein-coding LOC102003335 olfactory receptor 2S2-like NW_004955472 333588 338863 + 102003335 AGCD01053329;GBDK01098752;XM_005400985;XM_013522931 XP_005401042;XP_013378385 MODEL 39132559 rrna 5S_rRNA 5S ribosomal RNA 9029969 protein-coding Septin9 septin 9 INVOLVED IN actin cytoskeleton organization (ortholog); anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adenomatous Polyps (ortholog); amyotrophic neuralgia (ortholog); FOUND IN actin cytoskeleton (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955506 4943108 5033088 - 102014381 AGCD01065350;AGCD01065351;GBBH01030877;GBDF01087331;XM_005407395 XP_005407452 MODEL 9033586 trna Trnar-ccu transfer RNA arginine (anticodon CCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955553;NW_004955553;NW_004955442;NW_004955442;NW_004955494 1884364;1885977;14211807;14190493;3729252 1884436;1886049;14211879;14190565;3729324 +;+;-;-;- 101978840 AGCD01037805;AGCD01037806;AGCD01061481;AGCD01072903 MODEL 8955860 protein-coding Acss2 acyl-CoA synthetase short chain family member 2 ENCODES a protein that exhibits acetyl-CoA synthetase activity (ortholog); chromatin binding (ortholog); propionate-CoA ligase activity (ortholog); INVOLVED IN acetate biosynthetic process (ortholog); acetyl-CoA biosynthetic process (ortholog); ethanol catabolic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; Leigh disease pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955422 26450899 26500336 - 102017786 AGCD01023288;GBBH01140448;XM_005384812;XM_005384813;XM_013514052 XP_005384869;XP_005384870;XP_013369506 MODEL 8895308 protein-coding Bcs1l BCS1 ubiquinol-cytochrome c reductase complex chaperone ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH Bjornstad syndrome (ortholog); brain disease (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955453 14762237 14766693 - 102007967 AGCD01044873;GBDK01357365;XM_005395637;XM_005395638;XM_005395639;XM_005395640;XM_013519927;XM_013519928;XM_013519929;XM_013519930 XP_005395694;XP_005395695;XP_005395696;XP_005395697;XP_013375381;XP_013375382;XP_013375383;XP_013375384 MODEL 8948060 protein-coding LOC102009890 kallikrein-4-like NW_004955558 2014462 2080060 + 102009890 AGCD01073496;AGCD01073497;AGCD01073498;AGCD01073499;AGCD01073500;AGCD01073501;AGCD01073502;AGCD01073503;AGCD01073504;AGCD01073505;AGCD01073506;AGCD01073507;AGCD01073508;AGCD01073509;XM_013508851 XP_013364305 MODEL 8827585 pseudo LOC102024347 serine/arginine-rich splicing factor 10 pseudogene NW_004955490 1469012 1472222 + 102024347 AGCD01060108;AGCD01060109 MODEL 8756789 protein-coding Hivep2 HIVEP zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); allergic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955436 17368948 17549957 + 102009540 AGCD01033947;AGCD01033948;GBBH01177065;XM_005389252 XP_005389309 MODEL 9009364 pseudo LOC102002981 non-histone chromosomal protein HMG-14 pseudogene NW_004955633 74576 86858 - 102002981 AGCD01077593;AGCD01077594;AGCD01077595;XM_005415041;XR_265177 MODEL 8969714 protein-coding LOC102023343 putative olfactory receptor 10D4 NW_004955412 24784274 24785062 + 102023343 AGCD01013125;XM_005378637 XP_005378694 MODEL 8853422 protein-coding Fgf20 fibroblast growth factor 20 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor-receptor interaction (ortholog); INVOLVED IN cell differentiation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); inner ear receptor cell differentiation (ortholog); ASSOCIATED WITH Renal Hypodysplasia/Aplasia 2 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955463 528651 536927 + 102010780 AGCD01049488;XM_005398339 XP_005398396 MODEL 8958893 protein-coding Cfap157 cilia and flagella associated protein 157 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN sperm axoneme assembly (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955419 942147 950968 - 102027411 AGCD01019624;AGCD01019625;GBBH01165801;XM_005382414;XM_005382415;XM_005382416 XP_005382471;XP_005382472;XP_005382473 MODEL 8812028 pseudo LOC102012238 ras GTPase-activating protein-binding protein 2 pseudogene NW_004955526 2838596 2839845 + 102012238 AGCD01069322 MODEL 8728731 pseudo LOC102004739 olfactory receptor 8J1-like NW_004955511 1437243 1438189 + 102004739 AGCD01066367 MODEL 9011843 protein-coding Psmc2 proteasome 26S subunit, ATPase 2 ENCODES a protein that exhibits general transcription initiation factor binding (ortholog); proteasome-activating activity (ortholog); TBP-class protein binding (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955410 8341218 8355515 + 102016988 AGCD01010744;GBDF01009573;XM_005377230 XP_005377287 MODEL 8729309 protein-coding Gnmt glycine N-methyltransferase ENCODES a protein that exhibits folic acid binding (ortholog); glycine binding (ortholog); glycine N-methyltransferase activity (ortholog); INVOLVED IN glycine catabolic process (ortholog); glycine metabolic process (ortholog); glycogen metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH Chronic Hepatitis (ortholog); Experimental Diabetes Mellitus (ortholog); glycine N-methyltransferase deficiency (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); methyltransferase complex (ortholog) NW_004955437 8944288 8946642 + 102027229 AGCD01034508;GBDF01234278;XM_005389735 XP_005389792 MODEL 8982520 protein-coding Ephb3 EPH receptor B3 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 22900588 22919924 - 102016275 AGCD01021213;AGCD01021214;GBDI01185928;GBDJ01230601;XM_013513587 XP_013369041 MODEL 8776186 protein-coding LOC102007598 keratin, type II cuticular Hb5-like NW_004955547 2695857 2706205 + 102007598 AGCD01072294;GBDK01062119;XM_005411937 XP_005411994 MODEL 8978415 protein-coding B3galt4 beta-1,3-galactosyltransferase 4 ENCODES a protein that exhibits ganglioside galactosyltransferase activity (ortholog); N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog) NW_004955437 1839707 1840516 + 102010630 AGCD01034239;GBBH01117698;GBDF01155737;XM_005390114 XP_005390171 MODEL 39131803 rrna 5S_rRNA 5S ribosomal RNA 8962958 protein-coding Ak1 adenylate kinase 1 ENCODES a protein that exhibits AMP kinase activity (ortholog); dAMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); cerebellum development (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; ASSOCIATED WITH congenital nonspherocytic hemolytic anemia (ortholog); congenital nonspherocytic hemolytic anemia 3 (ortholog); hemolytic anemia (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955419 799415 807138 + 102024677 AGCD01019612;GBDF01157929;XM_005382404;XM_005382405 XP_005382461;XP_005382462 MODEL 8738985 ncrna LOC102011849 uncharacterized LOC102011849 NW_004955411 18463238 18501880 - 102011849 AGCD01012008;AGCD01012009;GBDI01303319;XR_259937 MODEL 8917005 protein-coding Fyb2 FYN binding protein 2 INVOLVED IN cell adhesion mediated by integrin (ortholog); T cell receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN immunological synapse (ortholog); membrane raft (ortholog) NW_004955464 2897292 2996606 + 102023567 AGCD01049967;GBDJ01386936;XM_013521593;XM_013521594;XM_013521595 XP_013377047;XP_013377048;XP_013377049 MODEL 9030226 protein-coding Hcar1 hydroxycarboxylic acid receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of lipid catabolic process (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955482 5998796 6002093 + 102028194 AGCD01057363;GBDK01125244;XM_005403075 XP_005403132 MODEL 39133657 mirna MIR582 microRNA 582 39131804 rrna 5S_rRNA 5S ribosomal RNA 10309719 ncrna LOC106149221 uncharacterized LOC106149221 NW_004955440 12617681 12624364 - 106149221 AGCD01036432;AGCD01036433;GBDF01078250;XR_001235250 MODEL 8902221 protein-coding Insig1 insulin induced gene 1 ENCODES a protein that exhibits oxysterol binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to sterol (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); SREBP-SCAP-Insig complex (ortholog) NW_004955491 8333624 8344658 + 102005718 AGCD01060613;AGCD01060614;GBDF01005321;GBDF01005322;XM_005404901 XP_005404958 MODEL 39131973 snorna SNORD81 Small nucleolar RNA SNORD81 10243479 ncrna LOC106150008 uncharacterized LOC106150008 NW_004955460 13641877 13643314 + 106150008 AGCD01048713;GBCC01034086;XR_001236521 MODEL 9007500 protein-coding Arrdc3 arrestin domain containing 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); INVOLVED IN fat pad development (ortholog); negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955418 20538858 20550876 + 102029968 AGCD01019234;AGCD01019235;AGCD01019236;GBBH01061457;GBCQ01007358;XM_013513045 XP_013368499 MODEL 8989607 protein-coding Ccdc117 coiled-coil domain containing 117 INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of DNA repair (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN mitotic spindle (ortholog); nucleus (ortholog) NW_004955455 3019373 3034891 + 102023001 AGCD01045608;AGCD01045609;GBDF01153507;XM_005396167;XM_005396168;XM_013520380 XP_005396224;XP_005396225;XP_013375834 MODEL 8763736 protein-coding Gipr gastric inhibitory polypeptide receptor ENCODES a protein that exhibits gastric inhibitory peptide receptor activity (ortholog); glucagon family peptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); desensitization of G protein-coupled receptor signaling pathway (ortholog); endocrine pancreas development (ortholog); ASSOCIATED WITH Body Weight (ortholog); Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955574 140307 153684 + 102015255 AGCD01075086;GBDK01050785;XM_013509505;XM_013509506;XM_013509507;XM_013509508;XM_013509509;XM_013509510;XM_013509511;XM_013509512;XR_001232446;XR_001232447 XP_013364959;XP_013364960;XP_013364961;XP_013364962;XP_013364963;XP_013364964;XP_013364965;XP_013364966 MODEL 8710384 protein-coding Fam177a1 family with sequence similarity 177 member A1 NW_004955409 25946694 25969387 - 102004572 AGCD01010143;AGCD01010144;GBDI01011683;XM_005376932 XP_005376989 MODEL 39134269 misc_rna 7SK 7SK RNA 8741413 protein-coding Coq7 coenzyme Q7, hydroxylase ENCODES a protein that exhibits 3-demethoxyubiquinone 3-hydroxylase (NADH) activity (ortholog); chromatin binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); determination of adult lifespan (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 9 (ortholog); Cachexia (ortholog); Carcinoma, Lewis Lung (ortholog); FOUND IN chromosome (ortholog); extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955442 3026458 3033582 - 102005306 AGCD01037492;GBDJ01421075;XM_005391098;XM_005391099 XP_005391155;XP_005391156 MODEL 8972200 protein-coding Chrm2 cholinergic receptor muscarinic 2 ENCODES a protein that exhibits arrestin family protein binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; ASSOCIATED WITH asthma (ortholog); bipolar disorder (ortholog); Bradycardia (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); cholinergic synapse (ortholog) NW_004955494 5845581 5975614 - 102007442 AGCD01061526;AGCD01061527;GBDF01014366;XM_005405469 XP_005405526 MODEL 9046492 ncrna LOC102005088 uncharacterized LOC102005088 NW_004955563 1734092 1737196 - 102005088 AGCD01074160;GBDF01006732;XR_001232369;XR_265018 MODEL 8766476 protein-coding LOC102017911 butyrophilin-like protein 1 NW_004955437 927041 935952 - 102017911 AGCD01034174;AGCD01034175;GBCQ01010671;XM_013516773 XP_013372227 MODEL 8868131 ncrna LOC102021271 uncharacterized LOC102021271 NW_004955433 9333586 9352335 + 102021271 AGCD01031611;GBDF01224018;XR_001234712;XR_261576 MODEL 8878731 protein-coding LOC102010672 uncharacterized LOC102010672 NW_004955456 8615945 8618802 + 102010672 AGCD01046495;AGCD01046496;GBDJ01224884;XM_013520516 XP_013375970 MODEL 9058148 protein-coding Myo5c myosin VC ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955409 2543520 2612867 + 102022170 AGCD01009201;AGCD01009202;AGCD01009203;AGCD01009204;AGCD01009205;AGCD01009206;GBBH01115679;XM_013510284 XP_013365738 MODEL 10235809 ncrna LOC106147066 uncharacterized LOC106147066 NW_004955514 5324731 5327152 + 106147066 AGCD01067151;GBDF01056348;XR_001231779 MODEL 39132562 rrna 5S_rRNA 5S ribosomal RNA 8830044 protein-coding Fgf16 fibroblast growth factor 16 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of brown fat cell proliferation (ortholog); positive regulation of endothelial cell chemotaxis to fibroblast growth factor (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); disease of cellular proliferation (ortholog); syndactyly type 8 (ortholog) NW_004955557 906361 915590 + 102018534 AGCD01073267;GBCB01017510;XM_005412621 XP_005412678 MODEL 8997198 protein-coding Hivep3 HIVEP zinc finger 3 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955537 1255284 1589514 - 102007277 AGCD01070890;AGCD01070891;AGCD01070892;AGCD01070893;AGCD01070894;AGCD01070895;AGCD01070896;GBDI01105470;XM_005410588;XM_005410591;XM_013507767;XM_013507768;XM_013507769;XM_013507770;XM_013507771 XP_005410645;XP_005410648;XP_013363221;XP_013363222;XP_013363223;XP_013363224;XP_013363225 MODEL 8873254 pseudo LOC102023346 40S ribosomal protein S24 pseudogene NW_004955413 27173334 27173770 - 102023346 AGCD01014497 MODEL 8708046 protein-coding Cldn4 claudin 4 INVOLVED IN circadian rhythm (ortholog); establishment of skin barrier (ortholog); female pregnancy (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); invasive ductal carcinoma (ortholog); malignant mesothelioma (ortholog); FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955456 13961743 13965498 - 102022359 AGCD01046629;GBDJ01020810;XM_005396763 XP_005396820 MODEL 9052679 protein-coding Kdm5c lysine demethylase 5C ENCODES a protein that exhibits histone H3K4 demethylase activity (ortholog); histone H3K4me/H3K4me2/H3K4me3 demethylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH Abdominal Pain (ortholog); Abnormal Reflexes (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955475 243666 278064 - 102010996 AGCD01054684;GBBH01093550;XM_005401477;XM_005401478;XM_005401479;XM_005401482;XM_005401483;XM_013502866;XM_013502867 XP_005401534;XP_005401535;XP_005401536;XP_005401539;XP_005401540;XP_013358320;XP_013358321 MODEL 8805579 protein-coding Cttnbp2 cortactin binding protein 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN regulation of modification of postsynaptic actin cytoskeleton (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN dendritic spine (ortholog); FAR/SIN/STRIPAK complex (ortholog); glutamatergic synapse (ortholog) NW_004955432 23364193 23527300 - 102005956 AGCD01031283;AGCD01031284;AGCD01031285;AGCD01031286;GBDK01323978;XM_005388158 XP_005388215 MODEL 10305060 ncrna LOC106150009 uncharacterized LOC106150009 NW_004955460 13690622 13695162 - 106150009 AGCD01048718;GBDK01350798;XR_001236522 MODEL 8787567 protein-coding Vwa5a von Willebrand factor A domain containing 5A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955412 24850301 24874498 + 102003105 AGCD01013130;GBBH01115484;XM_005378408;XM_005378409 XP_005378465;XP_005378466 MODEL 9051097 protein-coding Gnpat glyceronephosphate O-acyltransferase ENCODES a protein that exhibits catalytic activity (ortholog); glycerone-phosphate O-acyltransferase activity (ortholog); INVOLVED IN cerebellum morphogenesis (ortholog); ether lipid biosynthetic process (ortholog); membrane organization (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955492 7489080 7519590 - 102009288 AGCD01060798;GBCB01025381;XM_005404978 XP_005405035 MODEL 9014717 protein-coding Dctn4 dynactin subunit 4 INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); dynactin complex (ortholog) NW_004955415 3850475 3886953 + 102012531 AGCD01015956;AGCD01015957;AGCD01015958;GBDK01283632;XM_005380566;XM_013512222 XP_005380623;XP_013367676 MODEL 8979720 protein-coding LOC102003337 olfactory receptor 51G2-like NW_004955414 20918933 20919880 - 102003337 AGCD01015395;XM_005380486 XP_005380543 MODEL 15036840 trna Trnar-gcg transfer RNA arginine (anticodon GCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978838 8831381 ncrna LOC102011851 uncharacterized LOC102011851 NW_004955412 12945686 12959032 - 102011851 AGCD01012826;GBDF01076106;XR_259986 MODEL 39131655 rrna 5S_rRNA 5S ribosomal RNA 8970204 ncrna LOC102009891 uncharacterized LOC102009891 NW_004955444 753602 758219 - 102009891 AGCD01038683;GBDF01111656;XR_001235508 MODEL 8866043 ncrna LOC102024349 uncharacterized LOC102024349 NW_004955493 2933481 2936489 + 102024349 AGCD01060974;GBDF01276985;XR_264077 MODEL 8866243 pseudo LOC102006157 spermatogenesis-associated protein 2 pseudogene NW_004955433 1909956 1910500 - 102006157 AGCD01031373 MODEL 9010348 ncrna LOC102008756 uncharacterized LOC102008756 NW_004955429 17376692 17378662 + 102008756 AGCD01028854;GBDF01303361;XR_001234496 MODEL 8878534 ncrna LOC102007252 uncharacterized LOC102007252 NW_004955427 4321562 4338950 + 102007252 AGCD01026962;GBDF01219849;XR_001234341;XR_001234342;XR_261230 MODEL 8810119 protein-coding Acss3 acyl-CoA synthetase short chain family member 3 ENCODES a protein that exhibits acetyl-CoA synthetase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); propionate-CoA ligase activity (ortholog); PARTICIPATES IN 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; fatty acid beta degradation pathway; malonic aciduria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955405 19677191 19836086 + 102023866 AGCD01005043;AGCD01005044;AGCD01005045;AGCD01005046;AGCD01005047;GBCQ01000817;XM_005374371;XM_005374372;XM_013517967 XP_005374428;XP_005374429;XP_013373421 MODEL 39132569 rrna 5S_rRNA 5S ribosomal RNA 9056454 pseudo LOC102012243 ubiquitin-like protein FUBI pseudogene NW_004955538 2573003 2573441 + 102012243 AGCD01071128 MODEL 8873124 protein-coding Cfap161 cilia and flagella associated protein 161 INVOLVED IN flagellated sperm motility (ortholog); gene expression (ortholog); motile cilium assembly (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); sarcoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955416 11833610 11844452 + 102022191 AGCD01017192;GBCE01134717;GBDJ01352434;XM_005381440;XM_005381441;XM_013512409;XM_013512410 XP_005381497;XP_005381498;XP_013367863;XP_013367864 MODEL 8854344 protein-coding Fgf21 fibroblast growth factor 21 INVOLVED IN cellular response to glucagon stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Cardiomegaly (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955559 1818400 1821423 - 102004527 AGCD01073671;GBDF01061434;XM_013508993;XM_013508994 XP_013364447;XP_013364448 MODEL 8884599 protein-coding LOC102004740 glycine N-acyltransferase-like protein Keg1 NW_004955511 3618873 3627363 - 102004740 AGCD01066468;GBCQ01042492;XM_005408043 XP_005408100 MODEL 8953192 protein-coding Arrdc4 arrestin domain containing 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN extracellular vesicle biogenesis (ortholog); positive regulation of interferon-beta production (ortholog); positive regulation of ubiquitin-protein transferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955416 25573265 25583928 + 102027407 AGCD01017590;GBCE01069752;GBDF01049169;XM_005381612 XP_005381669 MODEL 8860675 ncrna LOC102007599 uncharacterized LOC102007599 NW_004955556 1440615 1452951 + 102007599 AGCD01073194;GBCE01045813;XR_264977 MODEL 9014452 protein-coding Psmc3 proteasome 26S subunit, ATPase 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst development (ortholog); host-mediated perturbation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); DEAFNESS, CATARACT, IMPAIRED INTELLECTUAL DEVELOPMENT, AND POLYNEUROPATHY (ortholog); FOUND IN nucleus (ortholog); P-body (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955422 837934 843161 + 102021984 AGCD01022437;GBDF01010552;XM_005383972 XP_005384029 MODEL 8971357 protein-coding B3galt5 beta-1,3-galactosyltransferase 5 INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH cervical cancer (ortholog); pancreatic cancer (ortholog); testicular germ cell cancer (ortholog) NW_004955407 38343581 38393408 + 102027045 AGCD01007804;AGCD01007805;GBDI01381461;XM_005375773;XM_005375774;XM_013504919;XM_013504924 XP_005375830;XP_005375831;XP_013360373;XP_013360378 MODEL 8777134 protein-coding Crocc2 ciliary rootlet coiled-coil, rootletin family member 2 ASSOCIATED WITH COVID-19 (ortholog) NW_004955542 647145 694523 - 102012804 AGCD01071475;GBBH01035127;XM_013508065;XM_013508066;XM_013508067;XM_013508068;XM_013508069;XM_013508070;XM_013508071;XM_013508072;XM_013508073;XM_013508074;XM_013508075;XM_013508076;XM_013508077;XM_013508078;XM_013508079;XR_001232162 XP_013363519;XP_013363520;XP_013363521;XP_013363522;XP_013363523;XP_013363524;XP_013363525;XP_013363526;XP_013363527;XP_013363528;XP_013363529;XP_013363530;XP_013363531;XP_013363532;XP_013363533 MODEL 8937439 protein-coding Cldn5 claudin 5 INVOLVED IN cell-cell junction assembly (ortholog); establishment of blood-retinal barrier (ortholog); establishment of endothelial barrier (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); developmental dysplasia of the hip (ortholog); epilepsy (ortholog); FOUND IN apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955442 18509501 18511267 + 102007600 AGCD01038009;GBDK01015754;XM_005391775 XP_005391832 MODEL 8791941 protein-coding Serac1 serine active site containing 1 INVOLVED IN extracellular matrix organization (ortholog); intracellular cholesterol transport (ortholog); phosphatidylglycerol acyl-chain remodeling (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); extracellular matrix (ortholog) NW_004955439 4234440 4291947 + 102013761 AGCD01035706;AGCD01035707;AGCD01035708;GBBH01082146;XM_005390526 XP_005390583 MODEL 8916145 pseudo LOC102013370 serine/Arginine-related protein 53 pseudogene NW_004955403 40310550 40311721 - 102013370 AGCD01002680;XM_005373899 MODEL 39131582 mirna MIR590 microRNA 590 8755646 protein-coding Chrm3 cholinergic receptor muscarinic 3 ENCODES a protein that exhibits acetylcholine binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); G protein-coupled acetylcholine receptor binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; ASSOCIATED WITH Ascites (ortholog); asthma (ortholog); bladder disease (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); basal plasma membrane (ortholog) NW_004955492 958347 1429832 - 102015019 AGCD01060652;AGCD01060653;AGCD01060654;AGCD01060655;AGCD01060656;AGCD01060657;AGCD01060658;AGCD01060659;GBDK01098808;XM_005404924;XM_013504730;XM_013504731;XM_013504732;XM_013504733;XM_013504734;XR_001231254 XP_005404981;XP_013360184;XP_013360185;XP_013360186;XP_013360187;XP_013360188 MODEL 8899837 pseudo LOC102005092 golgin subfamily A member 5 pseudogene NW_004955594 631055 633335 - 102005092 AGCD01076436 MODEL 8918715 protein-coding LOC102002983 uncharacterized LOC102002983 NW_004955403 53058177 53060011 - 102002983 AGCD01003030;GBDF01004642;GBDF01223597;XM_013514571 XP_013370025 MODEL 8997987 ncrna LOC102010678 uncharacterized LOC102010678 NW_004955410 29688647 29706211 + 102010678 AGCD01011293;GBDF01277999;XR_259884 MODEL 10298459 ncrna LOC106147067 uncharacterized LOC106147067 NW_004955514 4005456 4007317 - 106147067 AGCD01067124;GBDF01249505;XR_001231783 MODEL 10241858 ncrna LOC106149222 uncharacterized LOC106149222 NW_004955440 16710879 16729299 - 106149222 AGCD01036527;XR_001235251 MODEL 39131656 rrna 5S_rRNA 5S ribosomal RNA 8726017 protein-coding Nckap5l NCK associated protein 5 like INVOLVED IN microtubule bundle formation (ortholog); microtubule depolymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centrosome (ortholog); microtubule plus-end (ortholog) NW_004955547 381338 416658 - 102007942 AGCD01072153;AGCD01072154;GBDJ01280139;XM_005411849;XM_005411850;XM_013508476;XM_013508477;XM_013508478 XP_005411906;XP_005411907;XP_013363930;XP_013363931;XP_013363932 MODEL 8807574 protein-coding Kazn kazrin, periplakin interacting protein ASSOCIATED WITH cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cornified envelope (ortholog); cytosol (ortholog); desmosome (ortholog) NW_004955527 2963713 3970331 - 102016843 AGCD01069473;AGCD01069474;AGCD01069475;AGCD01069476;AGCD01069477;AGCD01069478;AGCD01069479;AGCD01069480;AGCD01069481;AGCD01069482;AGCD01069483;AGCD01069484;AGCD01069485;AGCD01069486;AGCD01069487;AGCD01069488;AGCD01069489;AGCD01069490;AGCD01069491;GBDK01215745;XM_005409886;XM_005409887;XM_013507404 XP_005409943;XP_005409944;XP_013362858 MODEL 8877012 pseudo LOC102005786 transcription elongation factor B polypeptide 1 pseudogene NW_004955412 19308345 19308746 + 102005786 AGCD01012950;XM_005378228 MODEL 8939432 ncrna LOC102007257 uncharacterized LOC102007257 NW_004955510 4095118 4095706 - 102007257 AGCD01066254;GBDF01078004;XR_264407 MODEL 39134270 misc_rna 7SK 7SK RNA 8822933 protein-coding Fam178b family with sequence similarity 178 member B ASSOCIATED WITH sarcoma (ortholog) NW_004955470 4227356 4303063 - 102024446 AGCD01052729;GBDI01053977;XM_005400687;XM_005400688;XM_013522748;XM_013522749 XP_005400744;XP_005400745;XP_013378202;XP_013378203 MODEL 8816544 protein-coding Git1 GIT ArfGAP 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); GTPase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cell redox homeostasis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); genetic disease (ortholog); Huntington's disease (ortholog); FOUND IN calyx of Held (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955481 3671728 3681279 + 102009945 AGCD01056911;GBBH01064442;XM_005402676 XP_005402733 MODEL 8912546 protein-coding Ak2 adenylate kinase 2 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleobase-containing compound kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); dATP metabolic process (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; de novo purine biosynthetic pathway; tenofovir pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog); sperm flagellum (ortholog); sperm mitochondrial sheath (ortholog) NW_004955452 11254853 11275587 - 102005553 AGCD01044333;GBCQ01035299;XM_005395104;XM_005395105 XP_005395161;XP_005395162 MODEL 8948477 protein-coding Cttnbp2nl CTTNBP2 N-terminal like ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); INVOLVED IN negative regulation of transmembrane transport (ortholog); negative regulation of transporter activity (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); FAR/SIN/STRIPAK complex (ortholog) NW_004955435 15858056 15910486 + 102030233 AGCD01033287;AGCD01033288;AGCD01033289;GBCQ01153403;XM_005388955;XM_005388956;XM_005388957 XP_005389012;XP_005389013;XP_005389014 MODEL 39131400 protein-coding NTN5 netrin 5 8944985 protein-coding Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 INVOLVED IN plus-end-directed vesicle transport along microtubule (ortholog); positive regulation of autophagosome maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cataract 18 (ortholog); cervical cancer (ortholog); FOUND IN autophagosome (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955420 26019621 26076846 + 102003348 AGCD01021388;AGCD01021389;GBBH01188767;XM_005383458;XM_005383459;XM_005383460;XM_005383461;XM_005383462 XP_005383515;XP_005383516;XP_005383517;XP_005383518;XP_005383519 MODEL 39131805 rrna 5S_rRNA 5S ribosomal RNA 9034186 protein-coding Insig2 insulin induced gene 2 ENCODES a protein that exhibits oxysterol binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol metabolic process (ortholog); cranial suture morphogenesis (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); end stage renal disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); SREBP-SCAP-Insig complex (ortholog) NW_004955459 11571582 11596069 - 102025440 AGCD01048233;GBDF01213828;XM_005397686;XM_005397687;XM_013521090 XP_005397743;XP_005397744;XP_013376544 MODEL 9003581 protein-coding Gnpda1 glucosamine-6-phosphate deaminase 1 ENCODES a protein that exhibits glucosamine-6-phosphate deaminase activity (ortholog); INVOLVED IN D-glucosamine catabolic process (ortholog); generation of precursor metabolites and energy (ortholog); UDP-N-acetylglucosamine biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955415 11770111 11783430 + 102028185 AGCD01016176;GBDK01082590;XM_005380710;XM_005380711 XP_005380767;XP_005380768 MODEL 39132457 snorna SNORD82 Small nucleolar RNA SNORD82 8789005 protein-coding Myo6 myosin VI ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); cellular response to electrical stimulus (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autosomal dominant nonsyndromic deafness (ortholog); FOUND IN actin filament (ortholog); apical part of cell (ortholog); axon (ortholog) NW_004955502 4219067 4356988 + 102003361 AGCD01064332;AGCD01064333;AGCD01064334;GBDI01215400;XM_005406898;XM_013505831;XM_013505832;XM_013505833;XM_013505834 XP_005406955;XP_013361285;XP_013361286;XP_013361287;XP_013361288 MODEL 8832071 trna Trnar-ucg transfer RNA arginine (anticodon UCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955483;NW_004955416;NW_004955553;NW_004955553 745122;769025;15772231;1885684;1885407 745194;769097;15772303;1885756;1885479 -;-;-;+;- 101978837 AGCD01017343;AGCD01057629;AGCD01057630;AGCD01072903 MODEL 8772269 pseudo LOC102009892 zinc finger CCCH domain-containing protein 15-like NW_004955566 44899 55696 + 102009892 AGCD01074343 MODEL 8867853 pseudo LOC102006158 nucleobindin-2 pseudogene NW_004955434 753047 754103 - 102006158 AGCD01032038 MODEL 8748447 pseudo LOC102023347 60S ribosomal protein L7 pseudogene NW_004955468 12719078 12719903 + 102023347 AGCD01052184;XM_005400226 MODEL 9039305 pseudo LOC102024355 solute carrier family 2, facilitated glucose transporter member 3 pseudogene NW_004955423 8600576 8602607 + 102024355 AGCD01023634;XM_005385137 MODEL 8960987 protein-coding Hcar2 hydroxycarboxylic acid receptor 2 ENCODES a protein that exhibits nicotinic acid receptor activity (ortholog); INVOLVED IN negative regulation of lipid catabolic process (ortholog); neutrophil apoptotic process (ortholog); positive regulation of adiponectin secretion (ortholog); ASSOCIATED WITH Flushing (ortholog); psoriasis (ortholog); schizophrenia (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog) NW_004955482 6007307 6009353 + 102028861 AGCD01057364;GBBH01173042;XM_005415327 XP_005415384 MODEL 8722473 protein-coding LOC102004742 olfactory receptor 5D18-like NW_004955511 617821 618762 + 102004742 AGCD01066336;XM_005408202 XP_005408259 MODEL 8936546 protein-coding Fgf22 fibroblast growth factor 22 INVOLVED IN regulation of synapse maturation (ortholog); trans-synaptic signaling (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); extrinsic component of postsynaptic density membrane (ortholog); GABA-ergic synapse (ortholog) NW_004955495 7099616 7102749 - 102022404 AGCD01062118;XM_005406031 XP_005406088 MODEL 9052304 protein-coding Bdh1 3-hydroxybutyrate dehydrogenase 1 ENCODES a protein that exhibits 3-hydroxybutyrate dehydrogenase activity (ortholog); phospholipid binding (ortholog); INVOLVED IN adipose tissue development (ortholog); ketone biosynthetic process (ortholog); ketone catabolic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ketone bodies metabolic pathway; succinyl-CoA:3-oxoacid transferase deficiency pathway; ASSOCIATED WITH cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955420 13454379 13486700 - 102023364 AGCD01020922;AGCD01020923;GBCB01044106;XM_005383174;XM_005383176 XP_005383231;XP_005383233 MODEL 8992611 protein-coding Vwa5b1 von Willebrand factor A domain containing 5B1 ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lymphoma (ortholog) NW_004955452 874819 938134 + 102018677 AGCD01043828;GBDK01400521;XM_005394679;XM_013519734;XM_013519735 XP_005394736;XP_013375188;XP_013375189 MODEL 8843816 protein-coding LOC102011853 uncharacterized LOC102011853 NW_004955466 8078031 8135745 + 102011853 AGCD01050979;GBDJ01302620;XM_005399163;XM_005399164;XM_013521878 XP_005399220;XP_005399221;XP_013377332 MODEL 9011212 protein-coding Serbp1 SERPINE1 mRNA binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); PML body organization (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955423 23763356 23774816 + 102015645 AGCD01024017;GBBH01001652;GBCE01000542;XM_005385275;XM_013514510;XM_013514511;XM_013514512 XP_005385332;XP_013369964;XP_013369965;XP_013369966 MODEL 8862625 protein-coding LOC102021272 mitochondrial amidoxime reducing component 2 NW_004955520 3003740 3026832 - 102021272 AGCD01068088;GBBH01189979;GBCB01025704;XM_013507064 XP_013362518 MODEL 9002789 protein-coding Fgf17 fibroblast growth factor 17 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hypogonadotropic hypogonadism 20 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog) NW_004955403 45544114 45548659 + 102030262 AGCD01002820;GBDF01213823;XM_005373644;XM_005373645 XP_005373701;XP_005373702 MODEL 8911930 pseudo LOC102008757 60S acidic ribosomal protein P0 pseudogene NW_004955429 2174980 2180342 + 102008757 AGCD01028416 MODEL 8922454 protein-coding Hjurp Holliday junction recognition protein ENCODES a protein that exhibits histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN CENP-A containing chromatin assembly (ortholog); chromosome segregation (ortholog); regulation of protein-containing complex assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN chromosome, centromeric region (ortholog); kinetochore (ortholog); nucleolus (ortholog) NW_004955453 2323018 2335090 + 102004349 AGCD01044625;GBDI01285278;XM_005395333 XP_005395390 MODEL 39132572 rrna 5S_rRNA 5S ribosomal RNA 10130379 protein-coding LOC106147068 uncharacterized LOC106147068 NW_004955514 2589193 2590069 + 106147068 AGCD01067084;GBCE01063443;XM_013506860 XP_013362314 MODEL 8906171 protein-coding CUNHXorf66 chromosome unknown CXorf66 homolog ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955489 5318531 5327883 + 102030639 AGCD01059934;AGCD01059935;GBDF01195698;XM_005404549 XP_005404606 MODEL 8933051 protein-coding Arrdc5 arrestin domain containing 5 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN membrane (ortholog) NW_004955495 4161144 4166968 + 102030436 AGCD01061898;AGCD01061899;GBDF01000032;XM_005405775 XP_005405832 MODEL 9012764 protein-coding Psmc3ip PSMC3 interacting protein ENCODES a protein that exhibits DNA binding domain binding (ortholog); identical protein binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); estrogen receptor signaling pathway (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 16464233 16467896 - 102020742 AGCD01043679;GBDF01020452;XM_005394467;XM_013519148 XP_005394524;XP_013374602 MODEL 8769971 protein-coding Dctn5 dynactin subunit 5 INVOLVED IN aorta development (ortholog); coronary vasculature development (ortholog); dynein-driven meiotic oscillatory nuclear movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); dynactin complex (ortholog) NW_004955493 2175585 2204742 + 102023486 AGCD01060932;AGCD01060933;AGCD01060934;AGCD01060935;GBDF01123485;XM_005405104;XR_264075 XP_005405161 MODEL 8765453 pseudo LOC102003338 zinc finger protein 3-like NW_004955415 14712827 14722881 - 102003338 AGCD01016308 MODEL 8707059 protein-coding B3galt6 beta-1,3-galactosyltransferase 6 ENCODES a protein that exhibits galactosylxylosylprotein 3-beta-galactosyltransferase activity (ortholog); UDP-galactosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH Al-Gazali Syndrome (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 1 (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 2 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) NW_004955486 9553765 9555675 - 102029184 AGCD01059190;AGCD01059191;GBDF01304798;XM_013504220 XP_013359674 MODEL 8718147 protein-coding Ak3 adenylate kinase 3 ENCODES a protein that exhibits AMP kinase activity (ortholog); identical protein binding (ortholog); nucleoside triphosphate adenylate kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); AMP phosphorylation (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo purine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH chronic lymphocytic leukemia (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955434 8998357 9010468 - 102027332 AGCD01032282;GBBH01062690;GBCE01029526;XM_013516310 XP_013371764 MODEL 8861992 protein-coding Crot carnitine O-octanoyltransferase ENCODES a protein that exhibits carnitine O-octanoyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); coenzyme A metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN peroxisome (ortholog) NW_004955607 379121 413394 - 102004223 AGCD01076984;GBCQ01005137;GBDI01181966;XM_005414907;XM_013510115 XP_005414964;XP_013365569 MODEL 9033175 protein-coding Git2 GIT ArfGAP 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN calyx of Held (ortholog); nucleoplasm (ortholog); presynapse (ortholog) NW_004955455 8611218 8669527 + 102014977 AGCD01045903;AGCD01045904;GBDF01251310;XM_005396431;XM_005396432;XM_005396433;XM_005396434;XM_005396435;XM_005396436;XM_005396437;XM_005396438;XM_005396442;XM_013520335;XR_001236294;XR_262844 XP_005396488;XP_005396489;XP_005396490;XP_005396491;XP_005396492;XP_005396493;XP_005396494;XP_005396495;XP_005396499;XP_013375789 MODEL 39133704 mirna MIR592 microRNA 592 39131806 rrna 5S_rRNA 5S ribosomal RNA 8889668 protein-coding Cldn6 claudin 6 ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN cell-cell junction organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog); plasma membrane (ortholog) NW_004955442 14323193 14326311 + 102008152 AGCD01037810;GBDF01217625;XM_005391379 XP_005391436 MODEL 9031653 protein-coding LOC102005097 beta-defensin 8-like NW_004955403 53669665 53672863 + 102005097 AGCD01003067;GBDK01012916;XM_005373835 XP_005373892 MODEL 9032234 protein-coding Chrm4 cholinergic receptor muscarinic 4 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH Catatonia (ortholog); congestive heart failure (ortholog); Tremor (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); glutamatergic synapse (ortholog) NW_004955422 1647663 1655363 + 102008737 AGCD01022467;GBDF01011379;XM_005384028;XM_005384029;XM_005384030;XR_001233927 XP_005384085;XP_005384086;XP_005384087 MODEL 8889058 protein-coding Insl3 insulin like 3 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); hormone activity (ortholog); protease binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled serotonin receptor signaling pathway (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); cryptorchidism (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955524 3413764 3415691 + 102015440 AGCD01068896;GBDF01010966;XM_005409546 XP_005409603 MODEL 8855856 protein-coding Gnpda2 glucosamine-6-phosphate deaminase 2 ENCODES a protein that exhibits glucosamine-6-phosphate deaminase activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine biosynthetic process (ortholog); ASSOCIATED WITH Body Weight (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955443 3338300 3360561 + 102004526 AGCD01038191;GBDF01162239;XM_013518064;XM_013518065 XP_013373518;XP_013373519 MODEL 8865387 protein-coding Kdm6a lysine demethylase 6A ENCODES a protein that exhibits chromatin DNA binding (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to endothelin (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog); nucleus (ortholog) NW_004955516 3151350 3346832 - 102029654 AGCD01067484;AGCD01067485;AGCD01067486;AGCD01067487;AGCD01067488;AGCD01067489;GBDJ01083590;XM_005408986;XM_005408987;XM_005408989;XM_005408990;XM_005408992 XP_005409043;XP_005409044;XP_005409046;XP_005409047;XP_005409049 MODEL 39131657 rrna 5S_rRNA 5S ribosomal RNA 8728125 protein-coding LOC102007601 kallikrein-4-like NW_004955558 1612493 1615729 + 102007601 AGCD01073453;XM_005412748 XP_005412805 MODEL 9035762 protein-coding Kbtbd11 kelch repeat and BTB domain containing 11 ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955403 57796246 57818666 - 102024301 AGCD01003158;AGCD01003159;AGCD01003160;GBCB01098397;GBDI01221487;XM_013515002 XP_013370456 MODEL 8843691 protein-coding LOC102005787 olfactory receptor 147-like NW_004955412 25191307 25192245 + 102005787 AGCD01013140;XM_005378415 XP_005378472 MODEL 39134271 misc_rna 7SK 7SK RNA 9047365 protein-coding LOC102007258 glycine N-phenylacetyltransferase-like NW_004955511 3686412 3716368 - 102007258 AGCD01066472;AGCD01066473;AGCD01066474;GBCQ01037301;XM_005408050;XM_005408051;XM_005408052;XM_005408054;XM_005408055;XM_013506345;XM_013506346 XP_005408107;XP_005408108;XP_005408109;XP_005408111;XP_005408112;XP_013361799;XP_013361800 MODEL 8897124 protein-coding Fam180a family with sequence similarity 180 member A ASSOCIATED WITH cervical cancer (ortholog); endometriosis (ortholog); hepatocellular carcinoma (ortholog) NW_004955494 6997706 7009955 + 102008547 AGCD01061545;GBCE01138457;XM_005405471 XP_005405528 MODEL 10210341 protein-coding Ctu1 cytosolic thiouridylase subunit 1 ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955558 959819 960369 - 106147428 AGCD01073408;GBCQ01013477;GBDI01384051;XM_013508884 XP_013364338 MODEL 9019535 protein-coding Ntn5 netrin 5 INVOLVED IN neurogenesis (ortholog); ASSOCIATED WITH melanoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955559 1892982 1901759 + 102021055 AGCD01073678;AGCD01073679;AGCD01073680;GBBH01020916;GBBH01098419;XM_013508995 XP_013364449 MODEL 8793199 pseudo LOC102013371 40S ribosomal protein S3a pseudogene NW_004955451 12173170 12175229 - 102013371 AGCD01043377 MODEL 8771651 protein-coding Fgf23 fibroblast growth factor 23 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to interleukin-6 (ortholog); cellular response to leptin stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal dominant hypophosphatemic rickets (ortholog); Bone Fractures (ortholog); calcinosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955413 2182459 2192279 - 102029842 AGCD01013543;GBCE01069564;XM_005378729 XP_005378786 MODEL 9064220 protein-coding Fyn FYN proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits alpha-tubulin binding (ortholog); CD4 receptor binding (ortholog); CD8 receptor binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to amyloid-beta (ortholog); PARTICIPATES IN altered Reelin signaling pathway; E-cadherin signaling pathway; eicosanoid signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); alcohol dependence (ortholog); Alzheimer's disease (ortholog); FOUND IN actin filament (ortholog); cell body (ortholog); cell periphery (ortholog) NW_004955411 36403156 36597660 - 102004462 AGCD01012472;AGCD01012473;AGCD01012474;GBCE01187860;GBDK01189551;XM_005377912 XP_005377969 MODEL 8716519 pseudo LOC102002984 60S ribosomal protein L8 pseudogene NW_004955403 16745732 16746501 + 102002984 AGCD01002067 MODEL 8904118 pseudo LOC102017915 60S ribosomal protein L22-like NW_004955439 5269080 5272255 + 102017915 AGCD01035727 MODEL 39132471 snorna SNORD82 Small nucleolar RNA SNORD82 8886432 pseudo LOC102010681 WD repeat domain phosphoinositide-interacting protein 2-like NW_004955411 4563483 4584420 + 102010681 AGCD01011581 MODEL 8921319 protein-coding LOC102011861 vomeronasal type-1 receptor 90-like NW_004955414 14978145 14979125 - 102011861 AGCD01015166;XM_005380440 XP_005380497 MODEL 8837504 pseudo LOC102012245 eukaryotic translation initiation factor 5 pseudogene NW_004955542 1250369 1252115 - 102012245 AGCD01071498 MODEL 8876912 trna Trnar-ucu transfer RNA arginine (anticodon UCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955423;NW_004955511;NW_004955465;NW_004955468;NW_004955467 841104;4044405;13275754;10939794;8841103 841188;4044489;13275843;10939867;8841189 -;+;+;-;- 101978839 AGCD01023421;AGCD01050596;AGCD01051475;AGCD01052109;AGCD01066488 MODEL 8720790 protein-coding Nckipsd NCK interacting protein with SH3 domain INVOLVED IN positive regulation of neuron projection development (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN COP9 signalosome (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955532 755997 766202 - 102030664 AGCD01070151;AGCD01070152;GBDI01323136;XM_005410166;XM_013507637;XM_013507638 XP_005410223;XP_013363091;XP_013363092 MODEL 9067683 protein-coding Fgf18 fibroblast growth factor 18 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chondrocyte development (ortholog); endochondral ossification (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Diaphragmatic Hernia (ortholog); Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955408 24225459 24260057 + 102021852 AGCD01008604;GBBH01096243;XM_005376329 XP_005376386 MODEL 8939046 ncrna LOC102023349 uncharacterized LOC102023349 NW_004955473 201154 206965 - 102023349 AGCD01053833;GBDF01118988;XR_263576 MODEL 8871876 protein-coding Hjv hemojuvelin BMP co-receptor ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); hemochromatosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); BMP receptor complex (ortholog); cell surface (ortholog) NW_004955568 80386 84707 + 102028911 AGCD01074502;GBCB01004263;XM_005413418 XP_005413475 MODEL 8826889 ncrna LOC102024364 uncharacterized LOC102024364 NW_004955428 4671289 4689561 - 102024364 AGCD01027700;GBBH01044020;XR_261294 MODEL 9034969 protein-coding Hcfc1 host cell factor C1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); allergic disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955580 616477 636849 - 102024399 AGCD01075615;AGCD01075616;GBDJ01092545;XM_005414175 XP_005414232 MODEL 8899037 protein-coding Arsa arylsulfatase A ENCODES a protein that exhibits arylsulfatase activity (ortholog); calcium ion binding (ortholog); cerebroside-sulfatase activity (ortholog); INVOLVED IN autophagy (ortholog); binding of sperm to zona pellucida (ortholog); response to estrogen (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Ataxia (ortholog); Autosomal Sideroblastic Anemia (ortholog); cerebral palsy (ortholog); FOUND IN acrosomal vesicle (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) NW_004955413 33624460 33629491 - 102008522 AGCD01014683;GBDK01093821;XM_005379595;XM_005379596;XM_013511654 XP_005379652;XP_005379653;XP_013367108 MODEL 8992261 pseudo LOC102003345 tubulin alpha-1C chain-like NW_004955483 529540 535066 - 102003345 AGCD01057622;XR_263877 MODEL 8756768 protein-coding Dctn6 dynactin subunit 6 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); mitotic spindle organization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); dynactin complex (ortholog) NW_004955463 6612124 6645962 + 102008201 AGCD01049686;AGCD01049687;AGCD01049688;AGCD01049689;GBBH01229700;GBDF01122568;XM_013521561;XM_013521562 XP_013377015;XP_013377016 MODEL 39133732 mirna MIR598 microRNA 598 8834948 protein-coding LOC102021273 olfactory receptor 2J3-like NW_004955524 178638 179582 - 102021273 AGCD01068669;XM_005409656 XP_005409713 MODEL 9005533 protein-coding Myo7a myosin VIIA ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ADP binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); auditory receptor cell stereocilium organization (ortholog); cochlea development (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); Arachnoid Cysts (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 14576356 14647500 - 102011193 AGCD01015155;GBDK01219650;XM_013512088 XP_013367542 MODEL 9048722 protein-coding Gja1 gap junction protein alpha 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-catenin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN adult heart development (ortholog); ATP transport (ortholog); atrial ventricular junction remodeling (ortholog); PARTICIPATES IN connexin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenoma (ortholog); alcohol use disorder (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); cell junction (ortholog) NW_004955436 3612533 3618095 + 102018020 AGCD01033637;GBDK01142153;XM_005389132 XP_005389189 MODEL 10233300 ncrna LOC106149223 uncharacterized LOC106149223 NW_004955440 13172323 13189586 - 106149223 AGCD01036442;XR_001235252 MODEL 8919204 protein-coding Cldn7 claudin 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); COVID-19 (ortholog); Neoplasm Metastasis (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955467 9652093 9654291 + 102023456 AGCD01051520;GBDJ01078868;XM_005399528 XP_005399585 MODEL 8952132 pseudo LOC102009895 DNA damage-regulated autophagy modulator protein 2 pseudogene NW_004955446 16745148 16746679 - 102009895 AGCD01040349 MODEL 10132148 ncrna LOC106147069 uncharacterized LOC106147069 NW_004955515 3679018 3718431 + 106147069 AGCD01067298;AGCD01067299;AGCD01067300;AGCD01067301;GBDI01252675;XR_001231785 MODEL 39132574 rrna 5S_rRNA 5S ribosomal RNA 8730064 protein-coding Kdm6b lysine demethylase 6B ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cell fate commitment (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autistic disorder (ortholog); breast carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955467 9085239 9106658 - 102004587 AGCD01051483;AGCD01051484;GBCE01170346;XM_005399460;XM_005399461;XM_013522060;XM_013522061;XM_013522062;XM_013522063;XM_013522064 XP_005399517;XP_005399518;XP_013377514;XP_013377515;XP_013377516;XP_013377517;XP_013377518 MODEL 8811176 protein-coding Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ENCODES a protein that exhibits glucosamine 6-phosphate N-acetyltransferase activity (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); D-glucosamine metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) NW_004955409 10406248 10424431 + 102008703 AGCD01009470;AGCD01009471;GBCQ01095032;XM_005376776;XM_005376777 XP_005376833;XP_005376834 MODEL 10063069 protein-coding LOC106150010 translation initiation factor IF-2-like NW_004955460 7458336 7460814 + 106150010 AGCD01048482;GBDF01006275;XM_013521221 XP_013376675 MODEL 8733503 ncrna LOC102005792 uncharacterized LOC102005792 NW_004955414 5124870 5149552 - 102005792 AGCD01014888;XR_260153 MODEL 9011245 protein-coding Fam180b family with sequence similarity 180 member B ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955422 709915 713027 - 102017347 AGCD01022432;GBCB01050245;XM_005383953 XP_005384010 MODEL 8990513 protein-coding Ctu2 cytosolic thiouridylase subunit 2 ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955541 2610021 2618197 + 102026798 AGCD01071418;AGCD01071419;GBBH01185371;XM_013507940 XP_013363394 MODEL 8943708 ncrna LOC102013376 uncharacterized LOC102013376 NW_004955453 7378233 7386961 + 102013376 AGCD01044743;GBDF01180127;XR_262716 MODEL 8860373 protein-coding Hk1 hexokinase 1 ENCODES a protein that exhibits ATP binding (ortholog); D-glucose binding (ortholog); fructokinase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); carbohydrate phosphorylation (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; fructose and mannose metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN caveola (ortholog); cilium (ortholog); cytosol (ortholog) NW_004955437 21733314 21824303 - 102023743 AGCD01034920;AGCD01034921;AGCD01034922;AGCD01034923;GBDK01082320;XM_005390087;XM_005390088;XM_005390089;XM_013517022;XM_013517023 XP_005390144;XP_005390145;XP_005390146;XP_013372476;XP_013372477 MODEL 39131807 rrna 5S_rRNA 5S ribosomal RNA 8790591 protein-coding Bdh2 3-hydroxybutyrate dehydrogenase 2 ENCODES a protein that exhibits 3-hydroxybutyrate dehydrogenase activity (ortholog); 4-oxoproline reductase activity (ortholog); NAD binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fatty acid beta-oxidation (ortholog); siderophore biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955496 5518403 5534325 + 102012338 AGCD01062355;XM_005406232 XP_005406289 MODEL 8764487 protein-coding Fgf3 fibroblast growth factor 3 INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of cardiac muscle tissue development (ortholog); organ induction (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Breast Neoplasms (ortholog); cleft lip (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955422 16333363 16339853 + 102016488 AGCD01022895;XM_005384959 XP_005385016 MODEL 8978811 protein-coding Crppa CDP-L-ribitol pyrophosphorylase A ENCODES a protein that exhibits cytidylyltransferase activity (ortholog); D-ribitol-5-phosphate cytidylyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); glycoprotein biosynthetic process (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2U (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955410 19359495 19614283 - 102020989 AGCD01011019;AGCD01011020;AGCD01011021;AGCD01011022;AGCD01011023;AGCD01011024;GBBH01022616;GBCQ01032334;XM_013510696 XP_013366150 MODEL 8746088 ncrna LOC102006159 uncharacterized LOC102006159 NW_004955526 3480118 3482226 - 102006159 AGCD01069336;GBDF01015650;XR_264662 MODEL 8977400 pseudo LOC102004744 UMP-CMP kinase pseudogene NW_004955515 4019058 4025494 - 102004744 AGCD01067313 MODEL 39131658 rrna 5S_rRNA 5S ribosomal RNA 8939665 protein-coding LOC102017919 olfactory receptor 11G2-like NW_004955550 885332 886303 - 102017919 AGCD01072528;XM_005412039 XP_005412096 MODEL 8735828 protein-coding Dctpp1 dCTP pyrophosphatase 1 ENCODES a protein that exhibits dCTP diphosphatase activity (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN dCTP catabolic process (ortholog); DNA protection (ortholog); dTTP catabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955493 7357204 7360034 - 102018841 AGCD01061183;GBDF01090247;XM_005405348 XP_005405405 MODEL 8739921 protein-coding Cuta cutA divalent cation tolerance homolog ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) NW_004955437 1947139 1948657 - 102005747 AGCD01034245;GBDK01069771;XM_005389493;XM_005389494;XM_013516769 XP_005389550;XP_005389551;XP_013372223 MODEL 9042515 protein-coding LOC102012249 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955546 2009351 2010344 + 102012249 AGCD01072081;XM_013508417 XP_013363871 MODEL 9021646 protein-coding Kbtbd12 kelch repeat and BTB domain containing 12 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955429 15698544 15760071 - 102027436 AGCD01028814;AGCD01028815;AGCD01028816;AGCD01028817;GBCB01020016;XM_005387047;XM_013515489 XP_005387104;XP_013370943 MODEL 8767572 protein-coding Vwa5b2 von Willebrand factor A domain containing 5B2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955420 23243197 23253202 - 102029752 AGCD01021238;GBCQ01177082;GBCQ01177083;XM_013513358;XM_013513359 XP_013368812;XP_013368813 MODEL 9028860 protein-coding Serf2 small EDRK-rich factor 2 INVOLVED IN protein destabilization (ortholog) NW_004955416 10251533 10252429 + 102012642 AGCD01017126;GBCB01007574;GBDF01001580;XM_005381409 XP_005381466 MODEL 8730835 pseudo LOC102012250 bromodomain-containing protein 7-like NW_004955441 5921864 5922609 - 102012250 AGCD01036892 MODEL 8836714 protein-coding Ak4 adenylate kinase 4 ENCODES a protein that exhibits AMP kinase activity (ortholog); CMP kinase activity (ortholog); dAMP kinase activity (ortholog); INVOLVED IN AMP metabolic process (ortholog); ATP metabolic process (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955423 25395086 25402324 - 102006256 AGCD01024070;GBCQ01001095;GBDI01026715;XM_013514473 XP_013369927 MODEL 8837927 pseudo LOC102002985 nucleophosmin pseudogene NW_004955451 90063 90680 - 102002985 AGCD01042917 MODEL 8927221 protein-coding Fyttd1 forty-two-three domain containing 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955420 12095055 12123900 - 102030533 AGCD01020852;AGCD01020853;AGCD01020854;AGCD01020855;GBCB01022405;XM_013513366 XP_013368820 MODEL 9023332 protein-coding B3gat1 beta-1,3-glucuronyltransferase 1 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Prostate Cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955412 35294434 35321873 - 102005242 AGCD01013408;AGCD01013409;GBDJ01307644;XM_005378603;XM_005378604;XM_005378605;XM_005378606;XM_005378607 XP_005378660;XP_005378661;XP_005378662;XP_005378663;XP_005378664 MODEL 8753930 ncrna LOC102005104 uncharacterized LOC102005104 NW_004955405 37762470 37765454 + 102005104 AGCD01005459;GBDF01250665;XR_001236112 MODEL 8861842 protein-coding Chrm5 cholinergic receptor muscarinic 5 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN regulation of dopamine secretion (ortholog); regulation of phosphatidylinositol dephosphorylation (ortholog); transmission of nerve impulse (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis dependence (ortholog); Cocaine-Related Disorders (ortholog) NW_004955416 526718 528353 - 102022696 AGCD01016810;XM_005381165 XP_005381222 MODEL 8805535 protein-coding Insl4 insulin like 4 NW_004955434 9365212 9367503 + 102029992 AGCD01032299;GBDK01328682;XM_005388657 XP_005388714 MODEL 39132709 snorna SNORD83 Small nucleolar RNA SNORD83 9043617 pseudo LOC102003347 ras-related protein Rab-5A pseudogene NW_004955419 16896961 16899862 + 102003347 AGCD01020131;AGCD01020132;AGCD01020133 MODEL 15036853 trna Trnas-acu transfer RNA serine (anticodon ACU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978841 8828118 protein-coding LOC102010684 C-type lectin domain family 2 member F-like NW_004955413 7860820 7873954 + 102010684 AGCD01013834;GBDF01050906;XM_005378944 XP_005379001 MODEL 8810400 ncrna LOC102007602 uncharacterized LOC102007602 NW_004955443 8592132 8720400 + 102007602 AGCD01038329;AGCD01038330;AGCD01038331;AGCD01038332;AGCD01038333;AGCD01038334;GBDI01032702;XR_262196;XR_262197 MODEL 10092742 ncrna LOC106149224 uncharacterized LOC106149224 NW_004955440 15676324 15677876 + 106149224 AGCD01036496;GBDJ01383023;XR_001235254 MODEL 9013972 protein-coding LOC102007259 olfactory receptor 5B3-like NW_004955511 3322239 3323164 - 102007259 AGCD01066458;GBDF01075823;XM_013506402 XP_013361856 MODEL 8872960 protein-coding Cfap184 cilia and flagella associated protein 184 NW_004955514 3478667 3480747 + 102016303 AGCD01067097;GBDI01353626;XM_005408799 XP_005408856 MODEL 8967577 protein-coding Gja10 gap junction protein alpha 10 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); gamete generation (ortholog); response to light stimulus (ortholog); FOUND IN gap junction (ortholog) NW_004955411 16586673 16601999 + 102017755 AGCD01011978;XM_005415331 XP_005415388 MODEL 8985804 protein-coding LOC102023351 skin secretory protein xP2-like NW_004955415 79838 125434 + 102023351 AGCD01015830;AGCD01015831;AGCD01015832;GBDF01276867;XM_013512119 XP_013367573 MODEL 39134510 misc_rna 7SK 7SK RNA 8763174 protein-coding Psmc4 proteasome 26S subunit, ATPase 4 INVOLVED IN blastocyst development (ortholog); regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); cytosolic proteasome complex (ortholog); inclusion body (ortholog) NW_004955578 1113445 1120050 - 102021402 AGCD01075510;GBCC01049534;XM_005414079 XP_005414136 MODEL 8729710 protein-coding Fgf19 fibroblast growth factor 19 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); heart development (ortholog); negative regulation of bile acid biosynthetic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); cholangiocarcinoma (ortholog); colitis (ortholog) NW_004955422 16415880 16419528 + 102017135 AGCD01022898;GBDJ01222896;XM_005384961 XP_005385018 MODEL 9057470 protein-coding Ncln nicalin ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein stabilization (ortholog); regulation of protein complex stability (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog); protein-containing complex (ortholog) NW_004955495 5222990 5238644 - 102024126 AGCD01061985;AGCD01061986;GBCB01024263;XM_005405846;XM_005405847 XP_005405903;XP_005405904 MODEL 8942501 ncrna LOC102024365 uncharacterized LOC102024365 NW_004955429 22477975 22490414 + 102024365 AGCD01029028;GBDJ01202921;XR_261390;XR_261391 MODEL 8910844 protein-coding Kdm7a lysine demethylase 7A ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH melanoma (ortholog) NW_004955494 3018395 3110528 + 102023162 AGCD01061463;AGCD01061464;AGCD01061465;AGCD01061466;GBDI01289995;XM_013504921 XP_013360375 MODEL 8917533 protein-coding Ntng1 netrin G1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cell-cell adhesion mediator activity (ortholog); INVOLVED IN axonogenesis (ortholog); modulation of chemical synaptic transmission (ortholog); regulation of neuron migration (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); brain disease (ortholog); colon adenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); presynaptic active zone membrane (ortholog) NW_004955435 10923557 11247091 + 102015759 AGCD01033104;AGCD01033105;AGCD01033106;AGCD01033107;AGCD01033108;AGCD01033109;AGCD01033110;AGCD01033111;AGCD01033112;GBCQ01103167;XM_005388820;XM_005388823;XM_005388824;XM_005388825 XP_005388877;XP_005388880;XP_005388881;XP_005388882 MODEL 9059633 protein-coding Arsb arylsulfatase B ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-acetylgalactosamine-4-sulfatase activity (ortholog); N-acetylgalactosamine-6-sulfatase activity (ortholog); INVOLVED IN anterior head development (ortholog); autophagy (ortholog); chondroitin sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); Corneal Opacity (ortholog); FOUND IN cell surface (ortholog); lysosome (ortholog) NW_004955425 22120507 22281221 + 102025379 AGCD01025816;AGCD01025817;AGCD01025818;GBCQ01034074;GBDF01235622;XM_013514875 XP_013370329 MODEL 9054308 protein-coding LOC102011862 uncharacterized LOC102011862 NW_004955474 8241162 8246129 - 102011862 AGCD01054547;GBDF01264907;XM_013502768 XP_013358222 MODEL 39131808 rrna 5S_rRNA 5S ribosomal RNA 8963166 pseudo LOC102004747 40S ribosomal protein SA pseudogene NW_004955526 2686932 2687895 - 102004747 AGCD01069310 MODEL 8954381 pseudo LOC102011864 up-regulated during skeletal muscle growth protein 5 pseudogene NW_004955416 8440518 8440842 - 102011864 AGCD01017056;XM_005381302 MODEL 39134272 misc_rna 7SK 7SK RNA 8790467 protein-coding Crtac1 cartilage acidic protein 1 INVOLVED IN axonal fasciculation (ortholog); olfactory bulb development (ortholog); regulation of synapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); growth cone (ortholog); postsynaptic density (ortholog) NW_004955507 3916803 4062118 - 102007922 AGCD01065639;AGCD01065640;GBDJ01253920;XM_005407641;XM_005407643;XM_005407644 XP_005407698;XP_005407700;XP_005407701 MODEL 8834264 protein-coding LOC102003349 uncharacterized LOC102003349 NW_004955420 23430746 23448623 - 102003349 AGCD01021246;AGCD01021247;AGCD01021248;GBDJ01304436;XM_005383606 XP_005383663 MODEL 8752739 protein-coding Cldn8 claudin 8 ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955407 29563982 29568728 - 102028719 AGCD01007610;GBCQ01002773;XM_005375624;XM_013504074 XP_005375681;XP_013359528 MODEL 8765495 protein-coding Hcfc1r1 host cell factor C1 regulator 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955442 14318071 14319549 + 102006717 AGCD01037810;GBBH01207291;XM_005391374 XP_005391431 MODEL 10065713 ncrna LOC106150011 uncharacterized LOC106150011 NW_004955460 8135802 8142315 - 106150011 AGCD01048512;GBDJ01299914;XR_001236532;XR_001236533 MODEL 39134511 misc_rna 7SK 7SK RNA 8793078 ncrna LOC102008759 uncharacterized LOC102008759 NW_004955432 20992358 20999001 - 102008759 AGCD01031212;AGCD01031213;GBDF01076071;XR_261539 MODEL 8830038 protein-coding Ctxn1 cortexin 1 NW_004955563 1343212 1344056 + 102018444 AGCD01074142;GBBH01001939;GBCB01089641;XM_005413139 XP_005413196 MODEL 8744635 protein-coding Gnptab N-acetylglucosamine-1-phosphate transferase subunits alpha and beta ENCODES a protein that exhibits UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); lysosome organization (ortholog); N-glycan processing to lysosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex (ortholog) NW_004955405 37107902 37136993 - 102003312 AGCD01005440;AGCD01005441;AGCD01005442;GBBH01163569;GBBH01163571;XM_013518708 XP_013374162 MODEL 8817378 ncrna LOC102013385 uncharacterized LOC102013385 NW_004955456 7020296 7021629 + 102013385 AGCD01046384;GBDF01208136;XR_262885 MODEL 9029295 protein-coding Pla2g3 phospholipase A2 group III ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cell development (ortholog); cell maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); essential tremor (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centriole (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955455 5314520 5320151 - 102004676 AGCD01045720;GBCC01027921;XM_005396297;XM_013520479;XM_013520480 XP_005396354;XP_013375933;XP_013375934 MODEL 8961014 protein-coding LOC102002991 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955406 23014463 23015572 + 102002991 AGCD01006162;XM_005375051 XP_005375108 MODEL 8828839 protein-coding Bdkrb1 bradykinin receptor B1 ENCODES a protein that exhibits bradykinin receptor activity (ortholog); peptide binding (ortholog); INVOLVED IN cell migration (ortholog); cyclooxygenase pathway (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH Diabetes Complications (ortholog); diabetic angiopathy (ortholog); diabetic neuropathy (ortholog) NW_004955438 16500219 16505394 - 102014289 AGCD01035420;GBDJ01390087;XM_005390373 XP_005390430 MODEL 8702571 protein-coding LOC102021276 disintegrin and metalloproteinase domain-containing protein 5-like NW_004955536 3528401 3648035 - 102021276 AGCD01070827;AGCD01070828;AGCD01070829;AGCD01070830;GBDF01008700;XM_005410548;XM_005410549;XM_013507719;XM_013507720 XP_005410605;XP_005410606;XP_013363173;XP_013363174 MODEL 8804133 ncrna LOC102006162 uncharacterized LOC102006162 NW_004955534 59116 62830 + 102006162 AGCD01070434;AGCD01070435;XR_264754 MODEL 8776022 protein-coding Myo7b myosin VIIB INVOLVED IN brush border assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical cytoplasm (ortholog); brush border (ortholog); microvillus (ortholog) NW_004955459 2914409 2990591 - 102029595 AGCD01048004;GBCQ01068604;XM_013521038 XP_013376492 MODEL 10112753 ncrna LOC106147070 uncharacterized LOC106147070 NW_004955515 4129498 4133202 + 106147070 AGCD01067316;GBDJ01059081;XR_001231787;XR_001231788 MODEL 8931798 trna Trnas-aga transfer RNA serine (anticodon AGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978802 AGCD01018131;AGCD01050593;AGCD01050595;AGCD01050596;AGCD01051466;AGCD01057629 MODEL 8881952 protein-coding LOC102009896 transmembrane protease serine 11F NW_004955447 4757521 4834971 + 102009896 AGCD01040733;GBDF01305457;XM_005392827 XP_005392884 MODEL 9033826 protein-coding LOC102010688 olfactory receptor 52D1-like NW_004955414 21652761 21653761 + 102010688 AGCD01015425;XM_005380102 XP_005380159 MODEL 8940065 ncrna LOC102005793 uncharacterized LOC102005793 NW_004955470 11386077 11391036 - 102005793 AGCD01052887;GBDF01224584;XR_001237001;XR_263503 MODEL 8862313 ncrna LOC102011865 uncharacterized LOC102011865 NW_004955477 3946286 3949237 + 102011865 AGCD01055577;GBDF01098162;XR_263654 MODEL 9032222 protein-coding Fam181a family with sequence similarity 181 member A ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955438 15992016 16001584 + 102008029 AGCD01035391;GBDF01006937;XM_005390352;XM_005390353;XM_005390354;XM_013517234;XM_013517235 XP_005390409;XP_005390410;XP_005390411;XP_013372688;XP_013372689 MODEL 8976889 protein-coding Cfap20 cilia and flagella associated protein 20 INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); positive regulation of cell motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); centriole (ortholog) NW_004955433 15648529 15663308 - 102010617 AGCD01031760;GBDF01049907;XM_005388433 XP_005388490 MODEL 9051765 protein-coding Vwa7 von Willebrand factor A domain containing 7 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955437 299554 308609 - 102004752 AGCD01034117;AGCD01034118;GBBH01227762;GBDJ01390262;XM_013516802 XP_013372256 MODEL 8977845 protein-coding Hk2 hexokinase 2 ENCODES a protein that exhibits ATP binding (ortholog); D-glucose binding (ortholog); fructokinase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); canonical glycolysis (ortholog); carbohydrate phosphorylation (ortholog); PARTICIPATES IN altered carbohydrate metabolic pathway; congenital sucrase-isomaltase deficiency pathway; Fanconi syndrome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955424 10897528 10966025 - 102019080 AGCD01024535;AGCD01024536;GBCB01019860;XM_005385474 XP_005385531 MODEL 8770240 protein-coding Mtmr14 myotubularin related protein 14 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant centronuclear myopathy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); ruffle (ortholog) NW_004955561 1195689 1237852 + 102004757 AGCD01073844;GBDF01156955;XM_005413017;XM_005413018 XP_005413074;XP_005413075 MODEL 10235799 protein-coding Ntng2 netrin G2 INVOLVED IN axonogenesis (ortholog); modulation of chemical synaptic transmission (ortholog); postsynaptic specialization assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955513 1654398 1701062 + 106147051 AGCD01066858;AGCD01066859;AGCD01066860;GBBH01055029;XM_013506741 XP_013362195 MODEL 8828984 protein-coding Fgf4 fibroblast growth factor 4 INVOLVED IN apoptotic process involved in morphogenesis (ortholog); cartilage condensation (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Pilonidal Sinus (ortholog) NW_004955422 16362418 16364126 + 102016820 AGCD01022896;GBDF01078711;XM_005384960 XP_005385017 MODEL 8978545 protein-coding Sergef secretion regulating guanine nucleotide exchange factor INVOLVED IN negative regulation of protein secretion (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955414 32579419 32796714 - 102012528 AGCD01015782;AGCD01015783;GBCQ01059662;XM_005380391;XM_005380392;XR_001233167;XR_001233168;XR_001233169;XR_001233170;XR_260218;XR_260219;XR_260220;XR_260221 XP_005380448;XP_005380449 MODEL 39131573 protein-coding FZD1 frizzled class receptor 1 8944491 ncrna LOC102005111 uncharacterized LOC102005111 NW_004955456 1951198 1954207 + 102005111 AGCD01046243;GBDF01252185;XR_001236331;XR_001236332 MODEL 8846876 protein-coding B3gat2 beta-1,3-glucuronyltransferase 2 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN carbohydrate biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Barrett's esophagus (ortholog); schizophrenia (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955488 5866148 5926567 - 102029299 AGCD01059637;AGCD01059638;AGCD01059639;AGCD01059640;AGCD01059641;AGCD01059642;GBDJ01044362;XM_005404478 XP_005404535 MODEL 8776668 protein-coding Insl5 insulin like 5 INVOLVED IN positive regulation of feeding behavior (ortholog) NW_004955423 24113596 24116795 + 102019078 AGCD01024031;GBDF01119655;XM_005385288 XP_005385345 MODEL 8963225 protein-coding Chrna1 cholinergic receptor nicotinic alpha 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); muscle cell cellular homeostasis (ortholog); musculoskeletal movement (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 1A (ortholog); congenital myasthenic syndrome 1B (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955449 661310 683873 + 102005534 AGCD01041771;GBBH01129594;XM_005393183 XP_005393240 MODEL 8728497 ncrna LOC102017922 uncharacterized LOC102017922 NW_004955557 454172 479709 - 102017922 AGCD01073244;GBDI01153372;XR_001232319;XR_264980 MODEL 39132580 rrna 5S_rRNA 5S ribosomal RNA 8757033 protein-coding Dcun1d1 defective in cullin neddylation 1 domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); regulation of protein neddylation (ortholog); regulation of protein ubiquitination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); ubiquitin ligase complex (ortholog) NW_004955420 11706649 11747471 - 102022502 AGCD01020830;AGCD01020831;AGCD01020832;GBBH01149746;GBDF01296186;XM_013513568 XP_013369022 MODEL 10299661 ncrna LOC106149225 uncharacterized LOC106149225 NW_004955440 14007611 14190374 + 106149225 AGCD01036457;AGCD01036458;AGCD01036459;AGCD01036460;AGCD01036461;AGCD01036462;AGCD01036463;GBDF01040542;XR_001235257;XR_001235258 MODEL 8960602 protein-coding Kbtbd13 kelch repeat and BTB domain containing 13 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); regulation of the force of skeletal muscle contraction (ortholog); relaxation of skeletal muscle (ortholog); ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) NW_004955450 10344020 10347686 - 102011714 AGCD01042613;GBCB01041383;XM_005393736 XP_005393793 MODEL 8743252 ncrna LOC102024366 uncharacterized LOC102024366 NW_004955430 7934793 7959906 - 102024366 AGCD01029378;GBDF01190263;XR_001234568;XR_001234569;XR_001234570 MODEL 8857109 protein-coding Psmc5 proteasome 26S subunit, ATPase 5 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA-binding transcription factor binding (ortholog); general transcription initiation factor binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of inclusion body assembly (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955478 7996902 8002183 - 102019597 AGCD01056005;GBDK01011483;XM_005402183 XP_005402240 MODEL 8950942 protein-coding Crtam cytotoxic and regulatory T cell molecule ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell recognition (ortholog); detection of stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN immunological synapse (ortholog); plasma membrane (ortholog) NW_004955412 23676171 23706250 + 102018070 AGCD01013092;GBDF01021719;XM_005378367 XP_005378424 MODEL 8856710 protein-coding Kdm8 lysine demethylase 8 ENCODES a protein that exhibits aminopeptidase activity (ortholog); chromatin binding (ortholog); endopeptidase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); fibroblast proliferation (ortholog); G2/M transition of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); Coffin-Siris syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955493 5437344 5462849 + 102005605 AGCD01061068;GBCE01005243;XM_005405133;XM_005405134 XP_005405190;XP_005405191 MODEL 39132715 snorna SNORD83 Small nucleolar RNA SNORD83 8703676 protein-coding Hcfc2 host cell factor C2 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); immune response involved in response to exogenous dsRNA (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); MLL1 complex (ortholog) NW_004955405 38729700 38758398 + 102009455 AGCD01005484;AGCD01005485;GBDF01082212;XM_005374584;XM_005374585;XM_005374586;XM_013518889 XP_005374641;XP_005374642;XP_005374643;XP_013374343 MODEL 8757184 protein-coding Arsg arylsulfatase G ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-sulfoglucosamine-3-sulfatase activity (ortholog); INVOLVED IN gene expression (ortholog); glial cell differentiation (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955478 4326669 4475559 - 102027638 AGCD01055847;AGCD01055848;AGCD01055849;AGCD01055850;AGCD01055851;GBDF01184931;XM_013503199;XM_013503200;XM_013503201;XM_013503202;XM_013503203;XM_013503204;XM_013503205;XM_013503206;XM_013503207;XM_013503208 XP_013358653;XP_013358654;XP_013358655;XP_013358656;XP_013358657;XP_013358658;XP_013358659;XP_013358660;XP_013358661;XP_013358662 MODEL 8781223 ncrna LOC102007605 uncharacterized LOC102007605 NW_004955447 15774756 15787240 - 102007605 AGCD01041068;AGCD01041069;GBDF01126660;XR_001235716;XR_001235717 MODEL 8729976 protein-coding Serinc1 serine incorporator 1 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN membrane biogenesis (ortholog); phosphatidylserine metabolic process (ortholog); sphingolipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955436 4414629 4435353 - 102025505 AGCD01033663;AGCD01033664;AGCD01033665;GBCE01004273;XM_005389150 XP_005389207 MODEL 8948003 pseudo LOC102007260 glutaredoxin-2, mitochondrial pseudogene NW_004955430 13298152 13298519 - 102007260 AGCD01029530 MODEL 8818045 protein-coding Bdkrb2 bradykinin receptor B2 ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); bradykinin receptor activity (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); arachidonate secretion (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); asthma (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) NW_004955438 16514300 16537160 - 102014608 AGCD01035420;AGCD01035421;GBDJ01225170;XM_005390374;XM_005390375 XP_005390431;XP_005390432 MODEL 8848038 protein-coding LOC102006164 24-hydroxycholesterol 7-alpha-hydroxylase ENCODES a protein that exhibits 24S-hydroxycholesterol 7-alpha-hydroxylase activity (ortholog); steroid 7-alpha-hydroxylase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); cholesterol catabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955437 11444780 11497268 - 102006164 AGCD01034574;GBDK01017216;XM_005389856 XP_005389913 MODEL 9018250 protein-coding LOC102021279 AFG3-like protein 1 NW_004955541 3433520 3460695 + 102021279 AGCD01071448;AGCD01071449;GBDF01049325;XM_013507965 XP_013363419 MODEL 39134273 misc_rna 7SK 7SK RNA 8805200 protein-coding Cutc cutC copper transporter ENCODES a protein that exhibits copper ion binding (ortholog); INVOLVED IN protein tetramerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955507 5617595 5664131 + 102016622 AGCD01065680;AGCD01065681;AGCD01065682;AGCD01065683;AGCD01065684;GBDF01308367;XM_005407673;XM_005407674;XM_005407675;XM_005407676;XM_013506197;XM_013506198;XR_001231629;XR_001231630 XP_005407730;XP_005407731;XP_005407732;XP_005407733;XP_013361651;XP_013361652 MODEL 9058216 pseudo LOC102023352 N-alpha-acetyltransferase 50 pseudogene NW_004955416 682183 682584 - 102023352 AGCD01016819 MODEL 8886399 protein-coding LOC102009898 prolactin-like NW_004955576 934768 939343 + 102009898 AGCD01075348;XM_013509612 XP_013365066 MODEL 8875688 protein-coding Gja4 gap junction protein alpha 4 INVOLVED IN blood vessel development (ortholog); calcium ion transport (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH angiosarcoma (ortholog); coronary artery disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN connexin complex (ortholog); gap junction (ortholog) NW_004955452 12902764 12905337 + 102013375 AGCD01044370;GBCE01072844;XM_005395125;XM_013519442 XP_005395182;XP_013374896 MODEL 8842862 protein-coding Ncmap non-compact myelin associated protein ENCODES a protein that exhibits structural constituent of myelin sheath (ortholog); INVOLVED IN peripheral nervous system myelin formation (ortholog); positive regulation of myelination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN paranode region of axon (ortholog); plasma membrane (ortholog); Schmidt-Lanterman incisure (ortholog) NW_004955452 4335411 4380972 + 102030032 AGCD01043973;AGCD01043974;AGCD01043975;AGCD01043976;AGCD01043977;AGCD01043978;AGCD01043979;AGCD01043980;GBDJ01061735;XM_005394808;XM_005394809;XM_005394810;XM_005394811;XR_262648 XP_005394865;XP_005394866;XP_005394867;XP_005394868 MODEL 39134446 misc_rna 7SK 7SK RNA 8793966 pseudo LOC102008760 ATP-dependent RNA helicase DDX50-like NW_004955519 1840874 1843190 - 102008760 AGCD01067909 MODEL 10335659 ncrna LOC106150012 uncharacterized LOC106150012 NW_004955402 9171471 9172006 - 106150012 AGCD01000207;GBCE01046074;XR_001236539 MODEL 8906443 protein-coding Ctxn2 cortexin 2 ASSOCIATED WITH hepatocellular carcinoma (ortholog); sarcoma (ortholog); thymoma (ortholog) NW_004955409 5685318 5695682 - 102013255 AGCD01009321;GBDF01260793;XM_005376706;XM_005376707 XP_005376763;XP_005376764 MODEL 39131809 rrna 5S_rRNA 5S ribosomal RNA 9065681 protein-coding LOC102013387 olfactory receptor 10A2-like NW_004955458 2450590 2451552 - 102013387 AGCD01047233;XM_005397241 XP_005397298 MODEL 8810014 protein-coding Hk3 hexokinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); fructokinase activity (ortholog); glucokinase activity (ortholog); INVOLVED IN fructose 6-phosphate metabolic process (ortholog); glucose 6-phosphate metabolic process (ortholog); negative regulation of hydrogen peroxide-mediated programmed cell death (ortholog); PARTICIPATES IN glycolysis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955408 29132717 29149030 - 102016787 AGCD01008738;GBBH01034103;XM_005376399;XM_013509661;XM_013509663;XM_013509667 XP_005376456;XP_013365115;XP_013365117;XP_013365121 MODEL 8798168 ncrna LOC102004751 uncharacterized LOC102004751 NW_004955437 17871916 17891241 + 102004751 AGCD01034762;GBCQ01090089;XR_001235033;XR_001235034;XR_001235035;XR_261887;XR_261889 MODEL 10176920 protein-coding LOC106147071 spermatogenesis-associated protein 31A6-like NW_004955515 3737183 3738035 + 106147071 AGCD01067302;GBBH01073597;XM_013506863 XP_013362317 MODEL 8877296 protein-coding Pla2g4a phospholipase A2 group IVA ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); calcium ion binding (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); arachidonate secretion (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; endothelin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955406 25257361 25392079 + 102014413 AGCD01006223;AGCD01006224;AGCD01006225;AGCD01006226;AGCD01006227;AGCD01006228;AGCD01006229;AGCD01006230;GBCE01023640;XM_005375092;XM_013521775 XP_005375149;XP_013377229 MODEL 9019618 protein-coding Fgf5 fibroblast growth factor 5 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); glial cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); familial isolated trichomegaly (ortholog); thymoma (ortholog) NW_004955433 4521566 4540672 + 102025037 AGCD01031469;AGCD01031470;XM_005388218;XM_013516118 XP_005388275;XP_013371572 MODEL 8901152 trna Trnas-cga transfer RNA serine (anticodon CGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955501;NW_004955465;NW_004955465;NW_004955467 1580746;13301831;13138748;8814367 1580827;13301912;13138829;8814448 +;-;+;+ 101978805 AGCD01050590;AGCD01050597;AGCD01051472;AGCD01064055 MODEL 8965289 pseudo LOC102010691 nudC domain-containing protein 2-like NW_004955475 11122125 11122610 - 102010691 AGCD01055143 MODEL 8901153 protein-coding LOC102003352 inositol 1,4,5-trisphosphate receptor type 1 NW_004955421 8603264 8928051 - 102003352 AGCD01021821;AGCD01021822;AGCD01021823;AGCD01021824;AGCD01021825;AGCD01021826;GBCE01055382;GBDF01285678;XM_013513709;XM_013513710;XM_013513711;XM_013513712;XM_013513713;XM_013513714;XM_013513715 XP_013369163;XP_013369164;XP_013369165;XP_013369166;XP_013369167;XP_013369168;XP_013369169 MODEL 8833292 pseudo LOC102022977 zinc finger protein DZIP1 pseudogene NW_004955563 1496656 1499178 + 102022977 AGCD01074150;XM_005413154 MODEL 39134274 misc_rna 7SK 7SK RNA 10120759 ncrna LOC106149226 uncharacterized LOC106149226 NW_004955440 10878821 10881310 + 106149226 AGCD01036400;GBDK01095329;XR_001235259;XR_001235260;XR_001235261 MODEL 8983925 protein-coding LOC102012257 lipopolysaccharide-binding protein NW_004955445 18358717 18389491 - 102012257 AGCD01039903;AGCD01039904;GBDJ01074877;XM_005392536;XR_001235614;XR_001235615;XR_001235616;XR_001235617;XR_262356 XP_005392593 MODEL 8702711 protein-coding LOC102025057 RBPJ-interacting and tubulin-associated protein 1-like NW_004955445 6768638 6786308 + 102025057 AGCD01039514;AGCD01039515;AGCD01039516;AGCD01039517;AGCD01039518;XM_013518238 XP_013373692 MODEL 9056290 protein-coding Fam181b family with sequence similarity 181 member B NW_004955414 9798441 9800232 + 102009274 AGCD01015034;AGCD01015035;GBBH01201204;XM_005380435 XP_005380492 MODEL 8931274 protein-coding LOC102021280 serpin A11 NW_004955438 17885184 17897498 + 102021280 AGCD01035456;GBDJ01284370;XM_005390392 XP_005390449 MODEL 8965782 protein-coding Dcun1d2 defective in cullin neddylation 1 domain containing 2 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); regulation of protein neddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955404 463238 491385 + 102002986 AGCD01003202;GBDI01220195;XM_005373939;XM_005373940;XM_005373941;XM_013515539;XM_013515541;XM_013515553 XP_005373996;XP_005373997;XP_005373998;XP_013370993;XP_013370995;XP_013371007 MODEL 8931080 protein-coding Gnptg N-acetylglucosamine-1-phosphate transferase subunit gamma ENCODES a protein that exhibits protein homodimerization activity (ortholog); UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex (ortholog) NW_004955442 15870409 15881552 - 102008266 AGCD01037883;AGCD01037884;GBDK01142808;XM_005391579;XM_005391580 XP_005391636;XP_005391637 MODEL 8910084 protein-coding Vwa8 von Willebrand factor A domain containing 8 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955518 4351781 4723479 + 102028887 AGCD01067827;AGCD01067828;AGCD01067829;AGCD01067830;AGCD01067831;AGCD01067832;AGCD01067833;AGCD01067834;AGCD01067835;AGCD01067836;GBCB01043083;GBDI01292258;XM_013506956 XP_013362410 MODEL 8703441 protein-coding Mtmr2 myotubularin related protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol phosphate phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); INVOLVED IN dendritic spine maintenance (ortholog); dephosphorylation (ortholog); myelin assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 693743 764377 - 102029489 AGCD01012494;AGCD01012495;AGCD01012496;GBCE01135603;GBDF01008769;XM_005377950 XP_005378007 MODEL 9061988 ncrna LOC102002993 uncharacterized LOC102002993 NW_004955407 12761327 12805870 - 102002993 AGCD01007138;AGCD01007139;GBDF01086288;XR_001230993 MODEL 8940144 protein-coding Kdr kinase insert domain receptor ENCODES a protein that exhibits cadherin binding (ortholog); coreceptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenocarcinoma (ortholog); adhesions of uterus (ortholog); FOUND IN cell junction (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955447 15810816 15851702 + 102009775 AGCD01041070;GBBH01206639;GBDF01114733;XM_013518554 XP_013374008 MODEL 8997334 protein-coding Arsh arylsulfatase family member H ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955499 1787356 1818206 + 102012979 AGCD01063385;AGCD01063386;AGCD01063387;XM_005406525;XM_013505555 XP_005406582;XP_013361009 MODEL 8898757 protein-coding Insl6 insulin like 6 INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); male gonad development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Hereditary Neoplastic Syndromes (ortholog) NW_004955434 9349033 9355817 - 102029657 AGCD01032299;GBDF01045874;XM_005388656 XP_005388713 MODEL 8942190 protein-coding LOC102007606 prolactin-like NW_004955576 1119907 1125387 + 102007606 AGCD01075360;GBCQ01002340;XM_005413941 XP_005413998 MODEL 8756930 ncrna LOC102017923 uncharacterized LOC102017923 NW_004955559 666827 667985 + 102017923 AGCD01073607;GBBH01083168;XR_264997 MODEL 9068092 protein-coding Hck HCK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits lipid binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); intracellular signal transduction (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); autoimmune disease (ortholog); FOUND IN actin filament (ortholog); caveola (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955422 28934512 28986998 - 102011881 AGCD01023375;AGCD01023376;GBDK01277740;XM_005384880;XM_013514242 XP_005384937;XP_013369696 MODEL 8877419 protein-coding Chrna10 cholinergic receptor nicotinic alpha 10 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); axon (ortholog); cholinergic synapse (ortholog) NW_004955414 19487840 19495368 - 102018918 AGCD01015320;AGCD01015321;GBBH01148635;XM_005380457 XP_005380514 MODEL 8703793 pseudo LOC102011867 josephin-1-like NW_004955417 14417553 14418271 + 102011867 AGCD01018204 MODEL 8876793 ncrna LOC102024368 uncharacterized LOC102024368 NW_004955431 15852819 15857933 + 102024368 AGCD01030364;GBDF01280634;XR_261481 MODEL 8852997 protein-coding Cux1 cut like homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN inner ear auditory receptor cell differentiation (ortholog); kidney development (ortholog); lung development (ortholog); ASSOCIATED WITH apraxia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955456 15292562 15636835 - 102018803 AGCD01046667;AGCD01046668;AGCD01046669;AGCD01046670;AGCD01046671;GBCB01021487;GBDJ01094797;XM_013520550 XP_013376004 MODEL 9022618 protein-coding LOC102003354 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7648769 7675912 - 102003354 AGCD01062155;AGCD01062156;XM_005406061 XP_005406118 MODEL 39131445 protein-coding NTNG2 netrin G2 8786494 protein-coding Crtap cartilage associated protein INVOLVED IN negative regulation of post-translational protein modification (ortholog); peptidyl-proline hydroxylation to 3-hydroxy-L-proline (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Dwarfism (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955421 384668 408214 + 102017243 AGCD01021560;GBCE01028694;XM_005383636 XP_005383693 MODEL 8949287 pseudo LOC102005113 basigin pseudogene NW_004955408 34149587 34150365 + 102005113 AGCD01008895;XM_005376594 MODEL 8770718 protein-coding Fzd10 frizzled class receptor 10 ENCODES a protein that exhibits Wnt receptor activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); non-canonical Wnt signaling pathway (ortholog); positive regulation of JNK cascade (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955482 1556123 1558782 - 102024568 AGCD01057220;GBCC01046187;XM_005403239 XP_005403296 MODEL 8841209 protein-coding Ctxn3 cortexin 3 NW_004955415 731895 741765 + 102030412 AGCD01015853;XM_005380546 XP_005380603 MODEL 39131810 rrna 5S_rRNA 5S ribosomal RNA 9002892 protein-coding Myo9a myosin IXA INVOLVED IN cell junction assembly (ortholog); establishment of epithelial cell apical/basal polarity (ortholog); postsynaptic specialization organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955450 5049797 5256934 + 102006299 AGCD01042491;AGCD01042492;AGCD01042493;AGCD01042494;AGCD01042495;AGCD01042496;AGCD01042497;AGCD01042498;AGCD01042499;GBDF01128608;XM_005393628;XM_013518986;XM_013518987;XM_013518988;XM_013518989;XM_013518990;XM_013518991 XP_005393685;XP_013374440;XP_013374441;XP_013374442;XP_013374443;XP_013374444;XP_013374445 MODEL 10303271 ncrna LOC106147072 uncharacterized LOC106147072 NW_004955515 1253399 1273984 + 106147072 AGCD01067222;AGCD01067223;XR_001231789;XR_001231790;XR_001231791 MODEL 8886352 protein-coding Serinc2 serine incorporator 2 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine metabolic process (ortholog); plasma membrane phospholipid scrambling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 9905152 9914943 + 102008911 AGCD01044263;GBBH01064457;GBDI01080614;XM_013519725 XP_013375179 MODEL 8721736 ncrna LOC102007261 uncharacterized LOC102007261 NW_004955431 18572768 18575376 - 102007261 AGCD01030431;XR_261488 MODEL 9063392 ncrna LOC102023354 uncharacterized LOC102023354 NW_004955416 23969095 23980352 - 102023354 AGCD01017556;AGCD01017557;GBCQ01094488;XR_260414 MODEL 8807547 protein-coding Bdnf brain derived neurotrophic factor ENCODES a protein that exhibits neurotrophin TRKB receptor binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axon target recognition (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ASSOCIATED WITH inner ear disease; acoustic neuroma (ortholog); acute stress disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955476 6773244 6822201 - 102016703 AGCD01055340;AGCD01055341;GBDK01412054;XM_005401751;XM_005401752;XM_005401753;XM_013503014;XM_013503015 XP_005401808;XP_005401809;XP_005401810;XP_013358468;XP_013358469 MODEL 8823933 pseudo LOC102007607 ubiquitin-fold modifier 1 pseudogene NW_004955583 28661 29029 - 102007607 AGCD01075791 MODEL 8861375 protein-coding Kbtbd2 kelch repeat and BTB domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN gene expression (ortholog); glucose metabolic process (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955617 137854 157801 - 102006853 AGCD01077270;GBDJ01337619;XM_005414989;XM_005414990;XM_005414991;XM_013510146 XP_005415046;XP_005415047;XP_005415048;XP_013365600 MODEL 8946950 protein-coding Psmc6 proteasome 26S subunit, ATPase 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of inclusion body assembly (ortholog); regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); lung cancer (ortholog); FOUND IN cytosolic proteasome complex (ortholog); inclusion body (ortholog); nucleus (ortholog) NW_004955409 10454210 10474872 - 102009582 AGCD01009472;GBDJ01190316;XM_005376779 XP_005376836 MODEL 8797959 ncrna LOC102022984 uncharacterized LOC102022984 NW_004955583 903467 919107 - 102022984 AGCD01075873;AGCD01075874;GBBH01177276;XR_001232507;XR_001232508;XR_001232509;XR_001232510;XR_265102 MODEL 39134447 misc_rna 7SK 7SK RNA 8990563 protein-coding Ncoa1 nuclear receptor coactivator 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN chromatin (ortholog); protein-containing complex (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955469 6676780 6892587 + 102028288 AGCD01052393;AGCD01052394;AGCD01052395;AGCD01052396;AGCD01052397;AGCD01052398;AGCD01052399;GBCE01085746;XM_005400388;XM_005400389;XM_005400390;XM_005400391;XM_013522653 XP_005400445;XP_005400446;XP_005400447;XP_005400448;XP_013378107 MODEL 39132272 snorna SNORD83A small nucleolar RNA, C/D box 83A 8983683 protein-coding Dcun1d3 defective in cullin neddylation 1 domain containing 3 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein neddylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955493 153226 186824 - 102004718 AGCD01060840;AGCD01060841;GBDK01116995;XM_005405044;XM_005405045;XM_005405046;XM_005405047;XM_013504830;XM_013504831 XP_005405101;XP_005405102;XP_005405103;XP_005405104;XP_013360284;XP_013360285 MODEL 8857374 protein-coding LOC102002994 keratin-associated protein 13-1-like NW_004955407 29780142 29780702 - 102002994 AGCD01007614;XM_005375629 XP_005375686 MODEL 8715599 protein-coding B3gat3 beta-1,3-glucuronyltransferase 3 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); Golgi apparatus (ortholog) NW_004955599 573982 578032 + 102015263 AGCD01076660;GBDK01069802;XM_005414790 XP_005414847 MODEL 39132581 rrna 5S_rRNA 5S ribosomal RNA 8989657 protein-coding Hkdc1 hexokinase domain containing 1 ENCODES a protein that exhibits glucokinase activity (ortholog); hexokinase activity (ortholog); INVOLVED IN glucose 6-phosphate metabolic process (ortholog); intracellular glucose homeostasis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); photoreceptor inner segment (ortholog) NW_004955437 21825647 21873698 - 102024505 AGCD01034923;AGCD01034924;GBCQ01101008;XM_005390090;XM_013516940 XP_005390147;XP_013372394 MODEL 9021863 protein-coding LOC102005795 fibrous sheath-interacting protein 2-like NW_004955473 4588318 4648716 + 102005795 AGCD01053953;AGCD01053954;GBDF01110725;XM_005401232;XM_013523062;XM_013523063 XP_005401289;XP_013378516;XP_013378517 MODEL 8897228 protein-coding Pla2g4b phospholipase A2 group IVB ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylethanolamine acyl-chain remodeling (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; alpha-linolenic acid metabolic pathway; antipyrine drug pathway; ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955416 8633249 8643219 + 102014353 AGCD01017064;GBDI01327602;XM_013512524 XP_013367978 MODEL 8796947 pseudo LOC102017926 40S ribosomal protein S20 pseudogene NW_004955574 1288578 1289272 - 102017926 AGCD01075172 MODEL 8915234 trna Trnas-gcu transfer RNA serine (anticodon GCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978842 AGCD01012398;AGCD01016984;AGCD01022970;AGCD01050591;AGCD01050613;AGCD01050626;AGCD01051471;AGCD01057630;AGCD01063790 MODEL 8812711 protein-coding Gja5 gap junction protein alpha 5 ENCODES a protein that exhibits connexin binding (ortholog); disordered domain specific binding (ortholog); gap junction channel activity (ortholog); INVOLVED IN angiogenesis (ortholog); artery morphogenesis (ortholog); atrial cardiac muscle cell to AV node cell communication by electrical coupling (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); atrial standstill 1 (ortholog); Brain Injuries (ortholog); FOUND IN cell projection (ortholog); connexin complex (ortholog); gap junction (ortholog) NW_004955568 635319 652692 + 102011154 AGCD01074524;GBDJ01063287;XM_005413452;XM_005413453;XM_005413454;XM_005413455;XM_005413456 XP_005413509;XP_005413510;XP_005413511;XP_005413512;XP_005413513 MODEL 8826608 pseudo LOC102010693 charged multivesicular body protein 1b-like NW_004955416 11825639 11828480 - 102010693 AGCD01017192 MODEL 39134275 misc_rna 7SK 7SK RNA 10341839 ncrna LOC106149227 uncharacterized LOC106149227 NW_004955440 10523880 10538941 + 106149227 AGCD01036392;AGCD01036393;GBCQ01004775;XR_001235262 MODEL 8890897 ncrna LOC102023356 uncharacterized LOC102023356 NW_004955417 28323417 28329404 + 102023356 AGCD01018579;GBDJ01104529;XR_001233405;XR_260508 MODEL 9054203 ncrna LOC102008766 uncharacterized LOC102008766 NW_004955435 5849029 5853706 - 102008766 AGCD01032901;AGCD01032902;GBDF01188936;XR_261666 MODEL 8739208 pseudo LOC102025063 calmodulin-like NW_004955447 17344080 17344572 - 102025063 AGCD01041118 MODEL 9010573 ncrna LOC102021281 uncharacterized LOC102021281 NW_004955440 12437369 12460160 - 102021281 AGCD01036429;AGCD01036430;GBDF01158322;XR_001235233;XR_001235234;XR_262018 MODEL 8931290 protein-coding Gnrh1 gonadotropin releasing hormone 1 ENCODES a protein that exhibits gonadotropin hormone-releasing hormone activity (ortholog); INVOLVED IN estrous cycle (ortholog); female pregnancy (ortholog); male sex determination (ortholog); ASSOCIATED WITH Adrenal Gland Neoplasms (ortholog); adult respiratory distress syndrome (ortholog); amenorrhea (ortholog); FOUND IN axon terminus (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); dendrite (ortholog) NW_004955403 48341731 48346595 - 102022992 AGCD01002917;GBDJ01325795;XM_005373712;XM_013514085 XP_005373769;XP_013369539 MODEL 8999557 pseudo LOC102013388 calcium-transporting ATPase type 2C member 1 pseudogene NW_004955408 2427135 2428006 + 102013388 AGCD01008006 MODEL 9026813 protein-coding Vwc2 von Willebrand factor C domain containing 2 INVOLVED IN negative regulation of BMP signaling pathway (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) NW_004955456 3949885 4075622 - 102006099 AGCD01046288;GBDI01379282;XM_013520509 XP_013375963 MODEL 8863825 protein-coding LOC102004761 eukaryotic translation initiation factor 1A, X-chromosomal-like NW_004955446 18926932 18928944 - 102004761 AGCD01040418;GBBH01096072;XM_013518447 XP_013373901 MODEL 8728018 protein-coding Fgf6 fibroblast growth factor 6 INVOLVED IN cartilage condensation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); myoblast differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); prostate carcinoma in situ (ortholog); FOUND IN sarcolemma (ortholog) NW_004955413 2246965 2257883 - 102030404 AGCD01013544;GBCB01049049;XM_005378730 XP_005378787 MODEL 8834284 pseudo LOC102005116 solute carrier family 25 member 36 pseudogene NW_004955459 839058 893923 - 102005116 AGCD01047955;AGCD01047956;AGCD01047957 MODEL 8738667 protein-coding Mtmr4 myotubularin related protein 4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN midbody abscission (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of endocytic recycling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hereditary breast ovarian cancer syndrome (ortholog); lung cancer (ortholog); FOUND IN early endosome membrane (ortholog); early phagosome membrane (ortholog); endosome membrane (ortholog) NW_004955451 4531966 4557528 + 102024296 AGCD01043128;AGCD01043129;AGCD01043130;GBDF01188256;XM_005394015;XM_005394016;XM_013519397;XM_013519398 XP_005394072;XP_005394073;XP_013374851;XP_013374852 MODEL 8828092 protein-coding Insm1 INSM transcriptional repressor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); cyclin binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal chromaffin cell differentiation (ortholog); cell differentiation (ortholog); endocrine pancreas development (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN nucleus (ortholog); transcription repressor complex (ortholog) NW_004955415 28396176 28398114 + 102010364 AGCD01016641;GBBH01179747;XM_013512134 XP_013367588 MODEL 9062204 protein-coding Kdsr 3-ketodihydrosphingosine reductase ENCODES a protein that exhibits 3-dehydrosphinganine reductase activity (ortholog); INVOLVED IN 3-keto-sphinganine metabolic process (ortholog); ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); erythrokeratodermia variabilis et progressiva 4 (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 47092779 47130131 - 102009132 AGCD01001171;AGCD01001172;GBCQ01072862;GBDF01003787;XM_013511228 XP_013366682 MODEL 8791802 ncrna LOC102009902 uncharacterized LOC102009902 NW_004956152 10489 11424 - 102009902 AGCD01079147;GBBH01228485;XR_265206 MODEL 8795745 protein-coding Arsi arylsulfatase family member I ASSOCIATED WITH autism spectrum disorder (ortholog); hereditary spastic paraplegia (ortholog); malaria (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955415 4234491 4240970 + 102017005 AGCD01015968;GBDK01300795;XM_005380580 XP_005380637 MODEL 8774714 ncrna LOC102022642 uncharacterized LOC102022642 NW_004955559 855626 857503 + 102022642 AGCD01073617;GBDK01270982;XR_264998 MODEL 10305017 ncrna LOC106147073 uncharacterized LOC106147073 NW_004955515 2397994 2408255 - 106147073 AGCD01067249;GBCB01083854;XR_001231792 MODEL 8863839 ncrna LOC102007263 uncharacterized LOC102007263 NW_004955432 19290564 19338278 + 102007263 AGCD01031177;AGCD01031178;GBBH01148299;XR_001234678;XR_261536 MODEL 8758605 pseudo LOC102024369 mitochondrial import receptor subunit TOM20 homolog pseudogene NW_004955432 8593440 8593852 + 102024369 AGCD01030884 MODEL 8838874 protein-coding LOC102006165 cytochrome c-type heme lyase ENCODES a protein that exhibits heme binding (ortholog); holocytochrome-c synthase activity (ortholog); INVOLVED IN cytochrome c biosynthetic process (ortholog); cytochrome c-heme linkage (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrion (ortholog) NW_004955544 2105486 2117830 - 102006165 AGCD01071732;GBCB01062002;XM_005411390 XP_005411447 MODEL 8909645 protein-coding LOC102011869 butyrophilin subfamily 1 member A1-like NW_004955483 371694 378761 - 102011869 AGCD01057606;AGCD01057607;XM_013503804 XP_013359258 MODEL 8737574 protein-coding Fam184a family with sequence similarity 184 member A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); P-body (ortholog) NW_004955436 1669200 1761908 - 102011582 AGCD01033585;AGCD01033586;AGCD01033587;GBDF01125366;GBDI01168305;XM_005389127;XM_005389128;XM_013516641;XM_013516642 XP_005389184;XP_005389185;XP_013372095;XP_013372096 MODEL 8913814 protein-coding LOC102003358 zinc finger protein 709-like NW_004955499 342903 348346 + 102003358 AGCD01063222;GBDI01384946;XM_013505570 XP_013361024 MODEL 8900609 protein-coding Ntpcr nucleoside-triphosphatase, cancer-related ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); CTPase activity (ortholog); GTPase activity (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955492 6253087 6279016 - 102003146 AGCD01060763;AGCD01060764;GBBH01142902;XM_005404963 XP_005405020 MODEL 8963881 protein-coding Cux2 cut like homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cognition (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955482 7783483 8045808 + 102005380 AGCD01057490;AGCD01057491;AGCD01057492;AGCD01057493;AGCD01057494;AGCD01057495;AGCD01057496;AGCD01057497;AGCD01057498;AGCD01057499;GBDF01087934;GBDF01087936;XM_013503646 XP_013359100 MODEL 8785449 protein-coding Kbtbd3 kelch repeat and BTB domain containing 3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955412 8703075 8723628 - 102026199 AGCD01012721;AGCD01012722;GBDK01170541;XM_005378014;XM_005378015;XM_005378016;XM_005378017;XM_005378018;XM_005378019;XM_013511193;XM_013511194;XM_013511195;XM_013511196 XP_005378071;XP_005378072;XP_005378073;XP_005378074;XP_005378075;XP_005378076;XP_013366647;XP_013366648;XP_013366649;XP_013366650 MODEL 8712514 protein-coding Fzd2 frizzled class receptor 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell-cell signaling (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); autosomal dominant Robinow syndrome 3 (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955451 17501410 17503726 + 102007727 AGCD01043754;GBBH01225132;XM_005394650 XP_005394707 MODEL 8942043 protein-coding Crtc1 CREB regulated transcription coactivator 1 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); INVOLVED IN energy homeostasis (ortholog); entrainment of circadian clock by photoperiod (ortholog); memory (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955524 2884654 2940601 - 102029324 AGCD01068843;AGCD01068844;AGCD01068845;GBCE01046058;XM_005409593;XM_005409594;XM_013507306;XM_013507307 XP_005409650;XP_005409651;XP_013362760;XP_013362761 MODEL 39131659 rrna 5S_rRNA 5S ribosomal RNA 9059074 protein-coding Hcls1 hematopoietic cell-specific Lyn substrate 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN actin filament organization (ortholog); cellular response to cytokine stimulus (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955427 20999934 21020401 - 102003788 AGCD01027431;GBBH01090130;XM_005386490 XP_005386547 MODEL 9011999 protein-coding Dcun1d4 defective in cullin neddylation 1 domain containing 4 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955447 18562946 18641179 - 102019218 AGCD01041180;AGCD01041181;GBBH01131669;XM_005392924;XM_013518545;XM_013518546 XP_005392981;XP_013373999;XP_013374000 MODEL 8721098 protein-coding Pla2g4c phospholipase A2 group IVC ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); lipid droplet formation (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell cortex (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955609 182706 212102 + 102010967 AGCD01077053;AGCD01077054;GBDJ01028499;XM_013510120 XP_013365574 MODEL 39134136 misc_rna 7SK 7SK RNA 8730795 protein-coding Gja8 gap junction protein alpha 8 ENCODES a protein that exhibits gap junction channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell-cell signaling (ortholog); gap junction-mediated intercellular transport (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); blindness (ortholog); cataract (ortholog); FOUND IN connexin complex (ortholog); plasma membrane (ortholog) NW_004955568 514905 516551 - 102010529 AGCD01074522;GBDF01215343;XM_005413451 XP_005413508 MODEL 8715506 protein-coding LOC102010697 olfactory receptor 2L3-like NW_004955418 30109107 30110042 + 102010697 AGCD01019503;XM_005382366 XP_005382423 MODEL 150537102 mirna MIR599 microRNA 599 8722929 ncrna LOC102021283 uncharacterized LOC102021283 NW_004955441 9505985 9509614 + 102021283 AGCD01037022;GBCB01131781;XR_262065 MODEL 39131569 protein-coding CTXND1 cortexin domain containing 1 39132275 snorna SNORD83B small nucleolar RNA, C/D box 83B 8852191 protein-coding Ncoa2 nuclear receptor coactivator 2 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); chromatin binding (ortholog); DNA polymerase binding (ortholog); INVOLVED IN cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered androgen signaling pathway; androgen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); nuclear body (ortholog) NW_004955444 9313748 9587109 + 102030577 AGCD01038968;AGCD01038969;AGCD01038970;AGCD01038971;GBBH01006633;GBDF01051363;XM_005392106 XP_005392163 MODEL 9062717 protein-coding Myo9b myosin IXB ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ADP binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); ARF protein signal transduction (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); celiac disease (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cytoplasm (ortholog) NW_004955524 973576 1024351 - 102029783 AGCD01068732;GBCE01115185;XM_005409507;XM_005409508;XM_005409509;XM_005409510;XM_013507277;XM_013507278;XR_264647;XR_264648 XP_005409564;XP_005409565;XP_005409566;XP_005409567;XP_013362731;XP_013362732 MODEL 39132585 rrna 5S_rRNA 5S ribosomal RNA 9057145 protein-coding B3glct beta 3-glucosyltransferase ENCODES a protein that exhibits glycosyltransferase activity (ortholog); O-fucosylpeptide 3-beta-glucosyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955431 14507184 14621376 - 102016185 AGCD01030330;AGCD01030331;AGCD01030332;AGCD01030333;GBDK01188717;XM_013515733 XP_013371187 MODEL 8720387 protein-coding Fgf7 fibroblast growth factor 7 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); branching involved in salivary gland morphogenesis (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH cervical squamous cell carcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955409 4633542 4686768 - 102007739 AGCD01009294;AGCD01009295;GBDI01327012;XM_005376685;XM_005376686;XM_013510298 XP_005376742;XP_005376743;XP_013365752 MODEL 8714168 protein-coding Kbtbd4 kelch repeat and BTB domain containing 4 ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); medulloblastoma non-WNT/non-SHH (ortholog) NW_004955422 717977 722918 + 102017673 AGCD01022432;GBDF01043941;XM_005383955;XM_005383957 XP_005384012;XP_005384014 MODEL 8769579 ncrna LOC102007609 uncharacterized LOC102007609 NW_004955450 683168 685850 - 102007609 AGCD01042342;GBCQ01139779;XR_262512 MODEL 8928724 pseudo LOC102017928 cyclin-G1 pseudogene NW_004955448 7013104 7014073 + 102017928 AGCD01041398 MODEL 8716221 ncrna LOC102012259 uncharacterized LOC102012259 NW_004955402 6847522 6850356 - 102012259 AGCD01000162;GBDF01162294;XR_001235451 MODEL 8774510 pseudo LOC102009903 probable U3 small nucleolar RNA-associated protein 11 pseudogene NW_004957626 626 1246 + 102009903 AGCD01081022 MODEL 9046568 protein-coding Keap1 kelch like ECH associated protein 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cellular response to carbohydrate stimulus (ortholog); cellular response to interleukin-4 (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); amyotrophic lateral sclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); Cul3-RING ubiquitin ligase complex (ortholog) NW_004955495 1704695 1711339 - 102006474 AGCD01061712;GBBH01001242;GBDK01022727;XM_013505131 XP_013360585 MODEL 15036854 trna Trnas-gga transfer RNA serine (anticodon GGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978803 39134448 misc_rna 7SK 7SK RNA 8808594 protein-coding LOC102023357 uncharacterized LOC102023357 NW_004955417 30963477 30973283 + 102023357 AGCD01018635;GBCQ01015420;XM_005382001 XP_005382058 MODEL 9030704 ncrna LOC102022985 uncharacterized LOC102022985 NW_004955402 30355688 30371406 - 102022985 AGCD01000769;GBCQ01030393;XR_259071 MODEL 8940113 pseudo LOC102008769 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955536 609566 611847 + 102008769 AGCD01070732 MODEL 10085710 ncrna LOC106150015 uncharacterized LOC106150015 NW_004955460 152469 155457 + 106150015 AGCD01048337;GBDK01160015;XR_001236537 MODEL 8930452 pseudo LOC102003359 transmembrane protein 254 pseudogene NW_004955424 24750779 24751166 - 102003359 AGCD01025032 MODEL 8766177 pseudo LOC102004762 ADP-ribosylation factor-like protein 5A pseudogene NW_004955574 1088556 1089812 - 102004762 AGCD01075153 MODEL 8966427 ncrna LOC102005799 uncharacterized LOC102005799 NW_004955476 1188807 1194269 + 102005799 AGCD01055201;GBDK01109467;XR_263617 MODEL 9000039 ncrna LOC102005117 uncharacterized LOC102005117 NW_004955460 7231987 7232762 - 102005117 AGCD01048479;GBDF01013953;XR_001236514;XR_263035 MODEL 8732268 protein-coding Fzd3 frizzled class receptor 3 ENCODES a protein that exhibits PDZ domain binding (ortholog); Wnt receptor activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in midbrain (ortholog); commissural neuron axon guidance (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar hypoplasia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955403 50899658 50959077 + 102014968 AGCD01002979;GBCE01171900;GBDI01323002;XM_005373776 XP_005373833 MODEL 8941266 protein-coding Bdp1 BDP1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); autosomal recessive nonsyndromic deafness 112 (ortholog); FOUND IN nucleoplasm (ortholog); transcription factor TFIIIB complex (ortholog) NW_004955575 330683 430269 + 102027917 AGCD01075218;AGCD01075219;AGCD01075220;AGCD01075221;GBDF01178164;XM_005413925;XM_005413926;XM_005413927;XM_005413928;XM_005413930 XP_005413982;XP_005413983;XP_005413984;XP_005413985;XP_005413987 MODEL 8748237 protein-coding Hlcs holocarboxylase synthetase ENCODES a protein that exhibits biotin binding (ortholog); biotin--[biotin carboxyl-carrier protein] ligase activity (ortholog); enzyme binding (ortholog); INVOLVED IN biotin metabolic process (ortholog); post-translational protein modification (ortholog); response to biotin (ortholog); PARTICIPATES IN biotin metabolic pathway; biotinidase deficiency pathway; holocarboxylase synthetase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); familial isolated deficiency of vitamin E (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nuclear lamina (ortholog) NW_004955407 35870820 36062066 - 102012061 AGCD01007753;AGCD01007754;AGCD01007755;GBBH01036963;GBDJ01016634;XM_013504641 XP_013360095 MODEL 8957417 protein-coding Serinc3 serine incorporator 3 ENCODES a protein that exhibits molecular carrier activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); plasma membrane phospholipid scrambling (ortholog); positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955445 12837616 12868631 + 102018346 AGCD01039763;AGCD01039764;GBDF01003618;XM_005392472 XP_005392529 MODEL 9034538 protein-coding Insm2 INSM transcriptional repressor 2 NW_004955409 25584543 25586025 - 102010456 AGCD01010118;GBDF01214949;XM_013510261 XP_013365715 MODEL 8868496 protein-coding Arsj arylsulfatase family member J ASSOCIATED WITH stomach cancer (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955428 25373664 25436251 + 102030219 AGCD01028282;GBCE01179357;XM_005386815 XP_005386872 MODEL 9066446 protein-coding Hcn1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 ENCODES a protein that exhibits cAMP binding (ortholog); identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); INVOLVED IN apical protein localization (ortholog); cellular response to cAMP (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955446 17146915 17457843 + 102028912 AGCD01040370;AGCD01040371;GBDF01269259;XM_005392730 XP_005392787 MODEL 10260250 ncrna LOC106147074 uncharacterized LOC106147074 NW_004955515 407228 409282 + 106147074 AGCD01067198;GBDJ01388559;XR_001231804 MODEL 8714037 protein-coding Ncoa3 nuclear receptor coactivator 3 ENCODES a protein that exhibits chromatin binding (ortholog); disordered domain specific binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cellular response to estradiol stimulus (ortholog); cerebellum development (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Bone Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955445 10020916 10085318 - 102010000 AGCD01039639;AGCD01039640;AGCD01039641;AGCD01039642;AGCD01039643;GBDF01157839;GBDI01127910;XM_005392342 XP_005392399 MODEL 8712326 protein-coding Psmd1 proteasome 26S subunit, non-ATPase 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); synaptic vesicle (ortholog) NW_004955453 4314177 4397972 - 102024421 AGCD01044686;AGCD01044687;GBCQ01003438;GBDI01005709;XM_013519960 XP_013375414 MODEL 8943102 ncrna LOC102024370 uncharacterized LOC102024370 NW_004955514 4624748 4630551 + 102024370 AGCD01067139;GBDF01039693;XR_264512 MODEL 10337105 ncrna LOC106149228 uncharacterized LOC106149228 NW_004955440 10700753 10750432 + 106149228 AGCD01036396;AGCD01036397;GBCQ01131134;XR_001235263 MODEL 8763257 protein-coding LOC102025065 olfactory receptor 15-like NW_004955581 700753 701637 - 102025065 AGCD01075689;XM_013509729 XP_013365183 MODEL 8737975 protein-coding LOC102007264 ATP-binding cassette sub-family G member 2-like NW_004955433 399182 486055 - 102007264 AGCD01031317;AGCD01031318;AGCD01031319;AGCD01031320;AGCD01031321;AGCD01031322;AGCD01031323;AGCD01031324;GBDJ01086753;XM_005388159 XP_005388216 MODEL 39134137 misc_rna 7SK 7SK RNA 8877987 protein-coding LOC102013390 uncharacterized LOC102013390 NW_004955409 845678 869527 + 102013390 AGCD01009168;GBDI01372716;XM_005376615;XM_005376617;XM_005376619;XM_005376621;XM_013510467;XM_013510468;XM_013510469;XM_013510470;XM_013510471;XM_013510472;XR_001232685;XR_001232686;XR_001232687 XP_005376672;XP_005376674;XP_005376676;XP_005376678;XP_013365921;XP_013365922;XP_013365923;XP_013365924;XP_013365925;XP_013365926 MODEL 8975352 protein-coding Fam184b family with sequence similarity 184 member B ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955480 6448130 6552071 + 102007767 AGCD01056684;AGCD01056685;AGCD01056686;GBCB01129730;XM_005402494 XP_005402551 MODEL 8940011 pseudo LOC102002996 mitochondrial fission factor-like NW_004955455 354378 355152 + 102002996 AGCD01045556 MODEL 8795534 pseudo LOC102010711 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955502 1434 3248 + 102010711 AGCD01064229 MODEL 8937771 protein-coding Cuzd1 CUB and zona pellucida like domains 1 INVOLVED IN hormone-mediated signaling pathway (ortholog); trypsinogen activation (ortholog); FOUND IN membrane (ortholog); zymogen granule (ortholog); zymogen granule membrane (ortholog) NW_004955477 1055245 1067702 - 102023588 AGCD01055502;GBDF01014874;XM_005401950 XP_005402007 MODEL 8887418 protein-coding Mtmr6 myotubularin related protein 6 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955497 4715236 4757182 - 102021780 AGCD01062585;GBDF01043253;XM_005406329;XM_005406330 XP_005406386;XP_005406387 MODEL 8724412 protein-coding Cubn cubilin ENCODES a protein that exhibits cargo receptor activity (ortholog); hemoglobin binding (ortholog); identical protein binding (ortholog); INVOLVED IN cobalamin catabolic process (ortholog); cobalamin metabolic process (ortholog); cobalamin transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Albuminuria (ortholog); amphetamine abuse (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955429 10789674 11038297 + 102028666 AGCD01028680;AGCD01028681;AGCD01028682;AGCD01028683;AGCD01028684;AGCD01028685;GBCQ01008980;XM_005386965 XP_005387022 MODEL 39131660 rrna 5S_rRNA 5S ribosomal RNA 9056815 protein-coding Crtc2 CREB regulated transcription coactivator 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN gluconeogenesis (ortholog); glucose homeostasis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 542916 554675 - 102024280 AGCD01071800;GBCQ01126602;XM_005411457;XR_001232183 XP_005411514 MODEL 8963609 protein-coding B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to leukemia inhibitory factor (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH Graves' disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); rheumatoid arthritis (ortholog) NW_004955424 21859901 21888722 - 102018944 AGCD01024912;AGCD01024913;GBCC01012841;XM_005385732 XP_005385789 MODEL 8765696 pseudo LOC102009912 KATNB1-like protein 1 pseudogene NW_004955406 13799840 13800569 + 102009912 AGCD01005954 MODEL 9049507 trna Trnas-uga transfer RNA serine (anticodon UGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955425;NW_004955465 756793;20176554;13268508 756874;20176635;13268589 +;+;+ 101978804 AGCD01025718;AGCD01050595;AGCD01057629 MODEL 8739895 pseudo Gnrh2p gonadotropin releasing hormone 2 pseudogene ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog) NW_004955415 13970416 13974147 + 102005135 AGCD01016278;XM_005415280 XP_005415337 MODEL 8758381 protein-coding Pla2g4d phospholipase A2 group IVD ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955416 8841645 8860381 - 102017565 AGCD01017071;GBDI01198984;XM_005381323 XP_005381380 MODEL 39134449 misc_rna 7SK 7SK RNA 9051602 ncrna LOC102022986 uncharacterized LOC102022986 NW_004955402 35983014 36086474 - 102022986 AGCD01000910;AGCD01000911;AGCD01000912;GBDF01084664;XR_001232816;XR_001232817;XR_001232818;XR_259079 MODEL 8732450 pseudo LOC102021286 methylosome subunit pICln pseudogene NW_004955559 1489054 1489989 + 102021286 AGCD01073647;XM_005412899 MODEL 8885404 pseudo LOC102005120 centromere protein H pseudogene NW_004955462 13884190 13890236 - 102005120 AGCD01049434 MODEL 8854610 protein-coding Bean1 brain expressed associated with NEDD4 1 ASSOCIATED WITH lymphoma (ortholog); spinocerebellar ataxia 31 (ortholog) NW_004955433 23017335 23059054 + 102015559 AGCD01031952;GBCE01163374;XM_005388509 XP_005388566 MODEL 9038087 pseudo LOC102007611 60 kDa heat shock protein, mitochondrial pseudogene NW_004955402 53200161 53201948 + 102007611 AGCD01001363 MODEL 39132454 snrna U6 U6 spliceosomal RNA 9004013 protein-coding Fgf8 fibroblast growth factor 8 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955485 8517412 8521732 + 102017343 AGCD01058719;GBDF01030332;XM_005403931 XP_005403988 MODEL 8819699 protein-coding Dcun1d5 defective in cullin neddylation 1 domain containing 5 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of protein neddylation (ortholog); regulation of cell growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); spindle (ortholog) NW_004955412 6185858 6217935 - 102019154 AGCD01012666;AGCD01012667;AGCD01012668;GBCB01021113;XM_005377993 XP_005378050 MODEL 8827225 pseudo LOC102011874 cytochrome c-type heme lyase pseudogene NW_004955489 679288 680097 - 102011874 AGCD01059812 MODEL 8868605 pseudo LOC102006168 40S ribosomal protein S2 pseudogene NW_004955442 9115157 9116092 + 102006168 AGCD01037662 MODEL 9012039 protein-coding Vwc2l von Willebrand factor C domain containing 2 like INVOLVED IN negative regulation of BMP signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); extracellular region (ortholog) NW_004955457 1392622 1540314 - 102021522 AGCD01046723;AGCD01046724;AGCD01046725;AGCD01046726;AGCD01046727;GBDF01130103;XM_013520670;XM_013520671 XP_013376124;XP_013376125 MODEL 8902431 ncrna LOC102017938 uncharacterized LOC102017938 NW_004955667 50137 52914 - 102017938 AGCD01077927;AGCD01077928;GBDI01252369;XR_265181 MODEL 9059837 protein-coding Kel Kell metallo-endopeptidase (Kell blood group) ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); intracellular magnesium ion homeostasis (ortholog); myelination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hemolytic disease of the fetus (ortholog); lung cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955494 668188 688036 + 102029757 AGCD01061383;GBBH01229481;XM_005405376;XM_005405377;XM_005405378;XR_264099 XP_005405433;XP_005405434;XP_005405435 MODEL 10277283 ncrna LOC106147075 uncharacterized LOC106147075 NW_004955516 3518591 3522860 + 106147075 AGCD01067494;GBCB01089270;XR_001231805;XR_001231806 MODEL 8807562 protein-coding Hcn2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); cellular response to aldosterone (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); dendrite membrane (ortholog); dendritic shaft (ortholog) NW_004955495 7124060 7143730 - 102016722 AGCD01062119;AGCD01062120;GBBH01120908;GBDI01196254;XM_013505311 XP_013360765 MODEL 9045991 protein-coding Ntrk1 neurotrophic receptor tyrosine kinase 1 ENCODES a protein that exhibits GPI-linked ephrin receptor activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis involved in innervation (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alcohol-Related Disorders (ortholog); Alcoholic Intoxication (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955545 2929704 2947579 + 102012476 AGCD01071930;GBDF01306274;XM_005411713;XM_005411714;XM_005411716 XP_005411770;XP_005411771;XP_005411773 MODEL 10063073 ncrna LOC106150016 uncharacterized LOC106150016 NW_004955460 6779113 6790061 - 106150016 AGCD01048477;GBDF01303447;XR_001236538 MODEL 8730436 ncrna LOC102024372 uncharacterized LOC102024372 NW_004955433 3738370 3744365 + 102024372 AGCD01031433;GBDF01008075;XR_001234706;XR_001234707 MODEL 8750983 pseudo LOC102007272 non-histone chromosomal protein HMG-17 pseudogene NW_004955528 2647383 2647654 - 102007272 AGCD01069588 MODEL 616940636 mirna MIR652 microRNA 652 8957824 ncrna LOC102004771 uncharacterized LOC102004771 NW_004955451 12688753 12693749 - 102004771 AGCD01043420;GBDI01181575;XR_001235990;XR_001235991;XR_262597 MODEL 8862071 pseudo LOC102005801 ewing's tumor-associated antigen 1 pseudogene NW_004955476 28845 38954 + 102005801 AGCD01055190 MODEL 8776781 protein-coding Myoc myocilin ENCODES a protein that exhibits fibronectin binding (ortholog); frizzled binding (ortholog); myosin light chain binding (ortholog); INVOLVED IN bone development (ortholog); cellular response to nerve growth factor stimulus (ortholog); clustering of voltage-gated sodium channels (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); combined immunodeficiency (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955406 12182115 12194683 - 102025868 AGCD01005911;AGCD01005912;GBBH01011840;XM_005374847 XP_005374904 MODEL 9028290 protein-coding Fam185a family with sequence similarity 185 member A ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955410 7960731 8011540 + 102015817 AGCD01010729;AGCD01010730;AGCD01010731;GBBH01057674;GBDF01250574;XM_013510521 XP_013365975 MODEL 9003008 protein-coding LOC102010712 huntingtin-interacting protein M-like NW_004955503 3419013 3419370 - 102010712 AGCD01064627;GBDF01001006;GBDK01096844;XM_013505852 XP_013361306 MODEL 9065350 protein-coding LOC102022989 uncharacterized LOC102022989 NW_004955600 495492 516773 + 102022989 AGCD01076726;AGCD01076727;AGCD01076728;GBDF01249628;GBDF01249630;XM_005414808 XP_005414865 MODEL 8834743 protein-coding Hlf HLF transcription factor, PAR bZIP family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Breast Cancer, Familial (ortholog); prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955451 7309895 7364166 - 102017291 AGCD01043233;GBCQ01009191;XM_005394081;XM_005394082 XP_005394138;XP_005394139 MODEL 10361026 protein-coding LOC106150017 translation initiation factor IF-2-like NW_004955460 315054 315615 + 106150017 AGCD01048340;GBDF01113276;XM_013521284 XP_013376738 MODEL 8970769 protein-coding Serinc4 serine incorporator 4 NW_004955416 10255269 10257996 - 102008411 AGCD01017126;GBDF01198361;XM_013512418 XP_013367872 MODEL 8945747 protein-coding LOC102012260 eukaryotic translation elongation factor 1 epsilon-1 NW_004955583 253526 254563 - 102012260 AGCD01075808;GBCC01054013;XM_005414299 XP_005414356 MODEL 8799229 protein-coding Arsk arylsulfatase family member K ENCODES a protein that exhibits arylsulfatase activity (ortholog); glucuronate-2-sulfatase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) NW_004955418 16959736 16989293 - 102016477 AGCD01019139;AGCD01019140;GBDJ01002127;XM_005382245 XP_005382302 MODEL 8831527 protein-coding Gja9 gap junction protein alpha 9 NW_004955452 16498189 16500190 - 102018558 AGCD01044514;XM_013519619 XP_013375073 MODEL 8718863 ncrna LOC102023358 uncharacterized LOC102023358 NW_004955481 7044388 7067422 - 102023358 AGCD01057048;AGCD01057049;AGCD01057050;AGCD01057051;GBBH01013120;XR_263788 MODEL 9018814 protein-coding Psmd10 proteasome 26S subunit, non-ATPase 10 INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955490 7825202 7832347 + 102014910 AGCD01060265;GBCE01045828;XM_005404680 XP_005404737 MODEL 8726988 protein-coding Ncoa4 nuclear receptor coactivator 4 INVOLVED IN intracellular iron ion homeostasis (ortholog); protein targeting to lysosome (ortholog); response to hormone (ortholog); PARTICIPATES IN iron homeostasis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN autolysosome (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955556 392412 413643 + 102024513 AGCD01073175;GBCQ01033190;XM_005412555;XM_005412556;XM_013508789 XP_005412612;XP_005412613;XP_013364243 MODEL 150537121 snorna SNORD86 small nucleolar RNA, C/D box 86 39134138 misc_rna 7SK 7SK RNA 8989680 protein-coding LOC102025067 chromosome unknown open reading frame, human C18orf54 INVOLVED IN negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955402 38929921 38950437 + 102025067 AGCD01000972;GBDF01004732;XM_013510824;XM_013510830;XM_013510832 XP_013366278;XP_013366284;XP_013366286 MODEL 10288267 protein-coding LOC106149229 uncharacterized LOC106149229 NW_004955440 16825196 16836806 - 106149229 AGCD01036533;GBDJ01220631;XM_013517493 XP_013372947 MODEL 9027619 protein-coding LOC102003362 60S ribosomal protein L29-like NW_004955505 6929524 6988367 + 102003362 AGCD01065190;AGCD01065191;AGCD01065192;AGCD01065193;XM_005407177 XP_005407234 MODEL 8983288 protein-coding Gns glucosamine (N-acetyl)-6-sulfatase ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); N-acetylglucosamine-6-sulfatase activity (ortholog); sulfate binding (ortholog); INVOLVED IN heparan sulfate proteoglycan catabolic process (ortholog); keratan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN azurophil granule (ortholog); lysosome (ortholog) NW_004955458 11471376 11500793 - 102022365 AGCD01047751;GBBH01034306;GBDI01070476;XM_005397447 XP_005397504 MODEL 8832321 pseudo LOC102013392 ribosomal L1 domain-containing protein 1 pseudogene NW_004955409 26666765 26667942 - 102013392 AGCD01010196 MODEL 39132589 rrna 5S_rRNA 5S ribosomal RNA 8861262 pseudo LOC102003001 E3 SUMO-protein ligase PIAS2 pseudogene NW_004955409 16215943 16246882 + 102003001 AGCD01009715;AGCD01009716;AGCD01009717 MODEL 8842814 protein-coding Ntrk2 neurotrophic receptor tyrosine kinase 2 ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); brain-derived neurotrophic factor receptor activity (ortholog); neurotrophin binding (ortholog); INVOLVED IN brain-derived neurotrophic factor receptor signaling pathway (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell surface (ortholog) NW_004955432 2284283 2629631 - 102028671 AGCD01030614;AGCD01030615;AGCD01030616;GBDJ01300372;XM_005387931;XM_005387932;XM_005387933;XM_005387934;XM_013516029 XP_005387988;XP_005387989;XP_005387990;XP_005387991;XP_013371483 MODEL 39131661 rrna 5S_rRNA 5S ribosomal RNA 8770695 protein-coding Cwc15 CWC15 spliceosome associated protein homolog INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); sarcoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955605 32721 42981 + 102023419 AGCD01076929;GBCQ01062528;XM_005414886 XP_005414943 MODEL 8865081 protein-coding Insr insulin receptor ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta clearance (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN altered insulin signaling pathway; altered leptin system pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); acute myeloid leukemia (ortholog); AIDS Dementia Complex (ortholog); FOUND IN caveola (ortholog); cell body (ortholog); dendrite (ortholog) NW_004955563 1867400 2011845 + 102016857 AGCD01074166;AGCD01074167;GBCB01025012;GBCE01008623;XM_013509165 XP_013364619 MODEL 8768235 protein-coding LOC102005121 cysteine-rich secretory protein 3-like NW_004955411 8128236 8151585 + 102005121 AGCD01011719;GBBH01140337;XM_005377667 XP_005377724 MODEL 8796085 ncrna LOC102008772 uncharacterized LOC102008772 NW_004955442 14332729 14334118 - 102008772 AGCD01037810;GBBH01025947;XR_001235407 MODEL 8966777 protein-coding B3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955524 3432797 3436941 - 102014706 AGCD01068897;GBBH01142850;GBDI01063068;XM_005409543 XP_005409600 MODEL 8928631 protein-coding LOC102009913 keratin-associated protein 20-2-like NW_004955407 30225299 30225502 + 102009913 AGCD01007628;XM_005375649 XP_005375706 MODEL 8727687 protein-coding LOC102017939 olfactory receptor 6C75-like NW_004956324 2385 3341 + 102017939 AGCD01079433;XM_005415195 XP_005415252 MODEL 9039182 protein-coding Kera keratocan INVOLVED IN cornea development in camera-type eye (ortholog); ASSOCIATED WITH arcus senilis (ortholog); cornea plana (ortholog); Cornea Plana 2 (ortholog) NW_004955405 28256054 28263559 - 102019353 AGCD01005234;GBCC01000239;XM_005374448;XM_013518226 XP_005374505;XP_013373680 MODEL 39134450 misc_rna 7SK 7SK RNA 8903363 protein-coding Fzd4 frizzled class receptor 4 ENCODES a protein that exhibits amyloid-beta binding (ortholog); cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; ASSOCIATED WITH Arachnodactyly (ortholog); cleft palate (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); dendrite (ortholog) NW_004955414 6094585 6103910 + 102007647 AGCD01014909;GBBH01102266;GBDJ01187528;XM_005379734 XP_005379791 MODEL 8700733 protein-coding LOC102022645 25-hydroxycholesterol 7-alpha-hydroxylase ENCODES a protein that exhibits 24S-hydroxycholesterol 7-alpha-hydroxylase activity (ortholog); 25-hydroxycholesterol 7-alpha-hydroxylase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); bile acid biosynthetic process (ortholog); circadian rhythm (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH adenocarcinoma (ortholog); amyotrophic lateral sclerosis (ortholog); Ataxia (ortholog) NW_004955444 14274818 14446068 + 102022645 AGCD01039118;AGCD01039119;AGCD01039120;AGCD01039121;AGCD01039122;GBBH01005355;GBCQ01011879;XM_013518189 XP_013373643 MODEL 8942136 protein-coding Cuedc1 CUE domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955451 5054633 5124318 + 102005764 AGCD01043162;AGCD01043163;GBCB01001214;XM_005394044;XM_005394045;XM_005394046 XP_005394101;XP_005394102;XP_005394103 MODEL 8900429 protein-coding Mtmr7 myotubularin related protein 7 ENCODES a protein that exhibits inositol bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endomembrane system (ortholog) NW_004955552 2298597 2412579 + 102025295 AGCD01072809;AGCD01072810;AGCD01072811;AGCD01072812;AGCD01072813;GBDF01279714;XM_005412210;XM_005412213 XP_005412267;XP_005412270 MODEL 39132456 snrna U6 U6 spliceosomal RNA 9039450 pseudo LOC102005802 60S ribosomal protein L37 pseudogene NW_004955416 8201222 8202250 - 102005802 AGCD01017037;XR_260372 MODEL 9001454 ncrna LOC102007612 uncharacterized LOC102007612 NW_004955451 5393479 5395031 - 102007612 AGCD01043166;GBDF01289099;XR_262582 MODEL 8750732 protein-coding Becn1 beclin 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); autophagosome assembly (ortholog); autophagosome maturation (ortholog); PARTICIPATES IN autophagy pathway; inositol metabolic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute necrotizing pancreatitis (ortholog); alcohol-associated liver disease (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog) NW_004955451 16616595 16625731 - 102024414 AGCD01043696;GBCQ01005143;XM_005394481;XM_013519257 XP_005394538;XP_013374711 MODEL 10356262 protein-coding LOC106150018 uncharacterized LOC106150018 NW_004955460 11102710 11108274 + 106150018 AGCD01048629;GBDI01167897;XM_013521289 XP_013376743 MODEL 8775268 protein-coding Fgf9 fibroblast growth factor 9 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell signaling (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog) NW_004955497 2199424 2232088 + 102015123 AGCD01062498;AGCD01062499;GBCQ01178042;XM_005406315 XP_005406372 MODEL 15036842 trna Trnastop-cua transfer RNA amber suppressor (anticodon CUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978848 9000697 protein-coding LOC102006174 lipopolysaccharide-binding protein-like NW_004955445 18292277 18311475 - 102006174 AGCD01039901;AGCD01039902;GBDK01402655;XM_005392587 XP_005392644 MODEL 8967462 protein-coding LOC102011879 spermatogenesis-associated protein 31E1-like NW_004955422 23602412 23608132 + 102011879 AGCD01023197;GBDK01288025;XM_005384703 XP_005384760 MODEL 9062428 protein-coding Vwce von Willebrand factor C and EGF domains ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955511 6235934 6251186 + 102018755 AGCD01066598;GBCQ01151731;XM_005408169 XP_005408226 MODEL 9057687 protein-coding Hcn3 hyperpolarization activated cyclic nucleotide gated potassium channel 3 ENCODES a protein that exhibits intracellularly cAMP-activated cation channel activity (ortholog); voltage-gated potassium channel activity (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to dopamine (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); cone cell pedicle (ortholog); dendrite (ortholog) NW_004955545 1730940 1744439 + 102005419 AGCD01071869;GBDF01211990;XM_005411599;XM_013508343 XP_005411656;XP_013363797 MODEL 8912475 protein-coding Gjb1 gap junction protein beta 1 ENCODES a protein that exhibits gap junction channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN epididymis development (ortholog); purine ribonucleotide transport (ortholog); ASSOCIATED WITH adenoma (ortholog); autoimmune thyroiditis (ortholog); axonal neuropathy (ortholog); FOUND IN cytoplasm (ortholog); gap junction (ortholog); lateral plasma membrane (ortholog) NW_004955475 10779415 10787910 + 102004275 AGCD01055115;GBCQ01005957;XM_005401654;XM_005401655 XP_005401711;XP_005401712 MODEL 8984025 protein-coding Pla2g4e phospholipase A2 group IVE ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN N-acylphosphatidylethanolamine metabolic process (ortholog); positive regulation of endocytic recycling (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955416 8765620 8826184 - 102017011 AGCD01017068;AGCD01017069;AGCD01017070;GBCB01100712;XM_005381321;XM_013512526;XM_013512528 XP_005381378;XP_013367980;XP_013367982 MODEL 8940178 ncrna LOC102009915 uncharacterized LOC102009915 NW_004955458 5401003 5402675 + 102009915 AGCD01047487;GBBH01073358;XR_262984 MODEL 8994865 protein-coding LOC102007274 FMR1 neighbor-like NW_004955532 1194463 1194945 + 102007274 AGCD01070170;XM_013507573 XP_013363027 MODEL 41410899 mirna MIR653 microRNA 653 8865501 protein-coding LOC102003363 olfactory receptor 8K5-like NW_004955511 1379800 1390219 + 102003363 AGCD01066366;XM_005407957;XM_005407958;XM_005407959 XP_005408014;XP_005408015;XP_005408016 MODEL 9060619 pseudo LOC102004774 protein FRG1 pseudogene NW_004955452 2196007 2237809 - 102004774 AGCD01043881;AGCD01043882;AGCD01043883;AGCD01043884 MODEL 8748522 protein-coding LOC102025068 tigger transposable element-derived protein 1-like NW_004955589 929222 930090 + 102025068 AGCD01076185;GBCE01110580;GBDI01331973;XM_013509949 XP_013365403 MODEL 8703124 protein-coding Crtc3 CREB regulated transcription coactivator 3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN energy homeostasis (ortholog); macrophage activation (ortholog); negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955416 14672291 14768879 + 102013291 AGCD01017282;AGCD01017283;GBBH01006313;GBDI01182296;XM_013512506 XP_013367960 MODEL 8921014 protein-coding Golga1 golgin A1 ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN transepithelial transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955419 3300351 3360495 + 102018188 AGCD01019717;AGCD01019718;AGCD01019719;GBCQ01030895;XM_005382475;XM_005382476;XM_013513149;XM_013513150;XM_013513151;XR_001233577;XR_260603 XP_005382532;XP_005382533;XP_013368603;XP_013368604;XP_013368605 MODEL 8798737 protein-coding Fam186a family with sequence similarity 186 member A ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955547 870511 930908 - 102015895 AGCD01072188;AGCD01072189;AGCD01072190;AGCD01072191;AGCD01072192;AGCD01072193;AGCD01072194;AGCD01072195;AGCD01072196;AGCD01072197;GBDF01046817;XM_005411959 XP_005412016 MODEL 8780782 pseudo LOC102010717 probable ATP-dependent RNA helicase DDX41 NW_004955428 2954658 3061479 + 102010717 AGCD01027644;AGCD01027645;AGCD01027646;AGCD01027647;AGCD01027648 MODEL 8886774 protein-coding Myocd myocardin ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cardiac muscle cell myoblast differentiation (ortholog); cardiac vascular smooth muscle cell differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic atherosclerosis (ortholog); atrial fibrillation (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955467 4653065 4743438 - 102024324 AGCD01051374;GBDJ01385806;XM_005399343 XP_005399400 MODEL 8933989 protein-coding Serinc5 serine incorporator 5 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); molecular carrier activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); myelination (ortholog); phosphatidylserine metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); myelin sheath (ortholog) NW_004955418 29502562 29573966 + 102006460 AGCD01019468;AGCD01019469;AGCD01019470;GBBH01115821;GBCB01111527;XM_013513014 XP_013368468 MODEL 8914759 protein-coding Ntrk3 neurotrophic receptor tyrosine kinase 3 ENCODES a protein that exhibits GPI-linked ephrin receptor activity (ortholog); neurotrophin receptor activity (ortholog); p53 binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleolus (ortholog) NW_004955416 16652931 17018188 + 102009716 AGCD01017360;AGCD01017361;AGCD01017362;AGCD01017363;AGCD01017364;AGCD01017365;GBCE01130254;XM_005381579;XM_005381580;XM_005381581;XM_005381583 XP_005381636;XP_005381637;XP_005381638;XP_005381640 MODEL 8713810 protein-coding Dcx doublecortin ENCODES a protein that exhibits microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN axon extension (ortholog); brain development (ortholog); central nervous system projection neuron axonogenesis (ortholog); ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); alcohol use disorder (ortholog); Ataxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955490 4354307 4469055 + 102004827 AGCD01060187;AGCD01060188;XM_005404644;XM_005404645 XP_005404701;XP_005404702 MODEL 8723429 protein-coding Hltf helicase like transcription factor ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN chromosomal DNA methylation maintenance following DNA replication (ortholog); DNA damage response (ortholog); mRNA transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nuclear replication fork (ortholog) NW_004955474 8411912 8488938 + 102013600 AGCD01054553;AGCD01054554;GBDF01004721;XM_005401415;XM_005401416;XM_005401417;XM_005401420;XM_005401421;XM_013502747 XP_005401472;XP_005401473;XP_005401474;XP_005401477;XP_005401478;XP_013358201 MODEL 8918641 pseudo LOC102023359 elongation factor 1-alpha 1-like NW_004955481 10327329 10331933 - 102023359 AGCD01057142 MODEL 8909994 protein-coding LOC102024378 DNA helicase MCM9-like NW_004955436 1593994 1628221 - 102024378 AGCD01033582;GBBH01209119;GBBH01209120;XM_013516639 XP_013372093 MODEL 8940114 protein-coding LOC102008777 atherin-like NW_004955558 851314 852320 + 102008777 AGCD01073394;GBCE01172818;GBDF01225096;XM_013508881 XP_013364335 MODEL 15036846 trna Trnastop-uca transfer RNA opal suppressor (anticodon UCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978847 8876101 protein-coding Psmd11 proteasome 26S subunit, non-ATPase 11 INVOLVED IN proteasome assembly (ortholog); regulation of AMPA receptor activity (ortholog); stem cell differentiation (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955481 7364543 7402770 + 102027185 AGCD01057061;AGCD01057062;AGCD01057063;GBDF01050146;XM_005402826;XM_013503426 XP_005402883;XP_013358880 MODEL 10093921 pseudo LOC106147077 T-cell immunomodulatory protein-like NW_004955516 685366 686407 - 106147077 AGCD01067394;AGCD01067395 MODEL 8888937 ncrna LOC102013393 uncharacterized LOC102013393 NW_004955410 13697777 13709802 - 102013393 AGCD01010893;GBDF01251247;XR_259838 MODEL 39134139 misc_rna 7SK 7SK RNA 10180643 ncrna LOC106149230 uncharacterized LOC106149230 NW_004955440 19802918 19817629 - 106149230 AGCD01036645;GBBH01210632;XR_001235275 MODEL 8713647 pseudo LOC102022991 opioid growth factor receptor-like protein 1 pseudogene NW_004955897 13719 14864 - 102022991 AGCD01078610 MODEL 8920360 protein-coding Fzd5 frizzled class receptor 5 ENCODES a protein that exhibits amyloid-beta binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior axis specification, embryo (ortholog); apoptotic process involved in morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); coloboma (ortholog); FOUND IN bicellular tight junction (ortholog); cell surface (ortholog); early endosome (ortholog) NW_004955457 7282403 7288918 + 102009691 AGCD01046875;GBDI01354226;XM_013520734 XP_013376188 MODEL 41410902 mirna MIR654 microRNA 654 39132458 snrna U6 U6 spliceosomal RNA 8816859 protein-coding Cwc22 CWC22 spliceosome associated protein homolog ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955403 17070588 17125918 + 102021297 AGCD01002070;GBCE01007893;XM_005373357;XM_013512563 XP_005373414;XP_013368017 MODEL 8777679 protein-coding Insrr insulin receptor related receptor ENCODES a protein that exhibits transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to alkaline pH (ortholog); male sex determination (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955545 2911691 2928335 - 102013450 AGCD01071929;AGCD01071930;GBCQ01038964;XM_013508211;XM_013508212;XM_013508213;XM_013508214;XM_013508215;XM_013508216 XP_013363665;XP_013363666;XP_013363667;XP_013363668;XP_013363669;XP_013363670 MODEL 8899021 protein-coding Kgd4 alpha-ketoglutarate dehydrogenase subunit 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Leigh disease (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) NW_004955446 38161 50167 + 102007381 AGCD01039921;AGCD01039922;GBCQ01034871;XM_005392589;XM_005392591 XP_005392646;XP_005392648 MODEL 8802107 pseudo LOC102011882 thioredoxin pseudogene NW_004955494 7209430 7210242 - 102011882 AGCD01061546 MODEL 8938303 pseudo LOC102017941 L-lactate dehydrogenase A chain pseudogene NW_004955403 58774316 58775377 - 102017941 AGCD01003191;XR_259281 MODEL 8861164 protein-coding Ncoa5 nuclear receptor coactivator 5 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 11219630 11251856 + 102021808 AGCD01039683;AGCD01039684;AGCD01039685;GBDF01047631;XM_005392387;XM_005392388;XM_013518291 XP_005392444;XP_005392445;XP_013373745 MODEL 8799950 protein-coding Fgfbp1 fibroblast growth factor binding protein 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955480 8088670 8091882 + 102015009 AGCD01056715;AY462142;GBBH01115136;XM_005402520 AAR26541;XP_005402577 MODEL 39132887 snorna SNORD87 small nucleolar RNA, C/D box 87 8731327 pseudo LOC102003005 cTAGE family member 5-like NW_004955463 249195 252486 + 102003005 AGCD01049479 MODEL 39134451 misc_rna 7SK 7SK RNA 39131662 rrna 5S_rRNA 5S ribosomal RNA 9052000 pseudo LOC102009916 KATNB1-like protein 1 pseudogene NW_004955458 3895009 3896301 + 102009916 AGCD01047353 MODEL 8866716 protein-coding Mtmr8 myotubularin related protein 8 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); phosphatidylinositol dephosphorylation (ortholog); regulation of macroautophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog); protein-containing complex (ortholog) NW_004955475 4358264 4391349 + 102023803 AGCD01054873;AGCD01054874;AGCD01054875;XM_013502805 XP_013358259 MODEL 8954281 ncrna LOC102005805 uncharacterized LOC102005805 NW_004955417 31526897 31527811 + 102005805 AGCD01018654;GBDI01226891;XR_260525 MODEL 8710393 protein-coding LOC102005126 olfactory receptor 149-like NW_004955412 25061204 25062136 + 102005126 AGCD01013133;XM_005378414 XP_005378471 MODEL 8915768 protein-coding Serp1 stress associated endoplasmic reticulum protein 1 INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); glucose metabolic process (ortholog); muscle organ morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic microtubule (ortholog) NW_004955448 1738242 1742807 - 102024738 AGCD01041266;AGCD01041267;GBCB01088573;GBDF01046142;XM_005393009 XP_005393066 MODEL 10345203 ncrna LOC106150019 uncharacterized LOC106150019 NW_004955460 11115100 11119671 + 106150019 AGCD01048629;XR_001236541 MODEL 9013604 pseudo LOC102021290 uncharacterized LOC102021290 NW_004955447 10934204 10968303 + 102021290 AGCD01040895 MODEL 8857490 protein-coding LOC102006178 UDP-glucuronosyltransferase 2B17-like NW_004955447 3671283 3776024 + 102006178 AGCD01040635;AGCD01040636;AGCD01040637;AGCD01040638;AGCD01040639;AGCD01040640;AGCD01040641;AGCD01040642;AGCD01040643;AGCD01040644;AGCD01040645;AGCD01040646;AGCD01040647;AGCD01040648;AGCD01040649;AGCD01040650;AGCD01040651;AGCD01040652;AGCD01040653;AGCD01040654;AGCD01040655;AGCD01040656;AGCD01040657;AGCD01040658;AGCD01040659;AGCD01040660;GBCQ01008307;XM_005392814;XM_005392815;XM_013518531;XM_013518532 XP_005392871;XP_005392872;XP_013373985;XP_013373986 MODEL 39132592 rrna 5S_rRNA 5S ribosomal RNA 10170936 protein-coding B3gnt4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); urinary bladder cancer (ortholog) NW_004955482 6359967 6365344 - 106146514 AGCD01057387;GBCE01084791;GBDJ01028511;XM_013503651 XP_013359105 MODEL 8919269 ncrna LOC102024384 uncharacterized LOC102024384 NW_004955537 2895294 2898325 - 102024384 AGCD01070939;GBCQ01154811;XR_264779 MODEL 9012944 protein-coding Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN cellular response to aldosterone (ortholog); cellular response to cAMP (ortholog); cellular response to cGMP (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH anxiety disorder (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); HCN channel complex (ortholog) NW_004955450 4139852 4181377 + 102025639 AGCD01042455;AGCD01042456;GBDK01339573;XM_005393600 XP_005393657 MODEL 8899441 protein-coding LOC102022646 CD209 antigen-like protein E NW_004955563 1483949 1487028 + 102022646 AGCD01074149;GBDI01067391;XM_005413153;XM_013509121 XP_005413210;XP_013364575 MODEL 8855390 protein-coding Arsl arylsulfatase L ENCODES a protein that exhibits arylsulfatase activity (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); autism spectrum disorder (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955499 1751663 1773112 - 102012452 AGCD01063383;AGCD01063384;AGCD01063385;GBDK01092445;XM_005406523;XM_005406524 XP_005406580;XP_005406581 MODEL 8911228 protein-coding Gjb2 gap junction protein beta 2 ENCODES a protein that exhibits calcium ion binding (ortholog); gap junction channel activity (ortholog); gap junction channel activity involved in cell communication by electrical coupling (ortholog); INVOLVED IN cell-cell signaling (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to glucagon stimulus (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN astrocyte projection (ortholog); cell body (ortholog); cell junction (ortholog) NW_004955497 987213 989477 - 102008747 AGCD01062443;GBCC01001206;XM_005406301 XP_005406358 MODEL 126903056 snorna SNORD88A small nucleolar RNA, C/D box 88A 8929936 protein-coding LOC102008778 olfactory receptor 1361-like NW_004955442 14157622 14158563 - 102008778 AGCD01037803;XM_005391854 XP_005391911 MODEL 8782010 pseudo LOC102007279 magnesium transporter NIPA2 pseudogene NW_004955439 11430788 11431838 + 102007279 AGCD01035908 MODEL 39134140 misc_rna 7SK 7SK RNA 8799447 protein-coding LOC102025070 uncharacterized LOC102025070 NW_004955402 21982712 22029582 - 102025070 AGCD01000595;AGCD01000596;GBDI01122543;XM_013509229 XP_013364683 MODEL 8735079 ncrna LOC102012261 uncharacterized LOC102012261 NW_004955450 975310 979893 + 102012261 AGCD01042346;GBDF01286154;XR_262513 MODEL 8855261 ncrna LOC102007614 uncharacterized LOC102007614 NW_004956066 2115 8161 - 102007614 AGCD01078986;GBDI01339207;XR_001232606;XR_265204 MODEL 39131663 rrna 5S_rRNA 5S ribosomal RNA 9023745 pseudo LOC102022996 calreticulin pseudogene NW_004955404 25701933 25702878 + 102022996 AGCD01003861 MODEL 8988396 protein-coding Myod1 myogenic differentiation 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to glucocorticoid stimulus (ortholog); cellular response to oxygen levels (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); congenital myopathy 17 (ortholog); congestive heart failure (ortholog); FOUND IN ATPase complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955414 32523959 32526575 + 102012187 AGCD01015781;GBCB01025019;XM_005380390 XP_005380447 MODEL 8728559 protein-coding Fzd6 frizzled class receptor 6 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); Wnt receptor activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN cell proliferation in midbrain (ortholog); embryonic nail plate morphogenesis (ortholog); establishment of body hair planar orientation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anhidrosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) NW_004955417 27465730 27493752 + 102021442 AGCD01018558;GBCQ01152007;XM_005381947 XP_005382004 MODEL 8996537 protein-coding Crx cone-rod homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian rhythm (ortholog); positive regulation of photoreceptor cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); cone-rod dystrophy 2 (ortholog); fundus dystrophy (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955574 1544917 1548912 + 102015358 AGCD01075189;XM_005413886 XP_005413943 MODEL 151707873 mirna MIR665 microRNA 665 8887911 protein-coding Hlx H2.0 like homeobox ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN animal organ development (ortholog); embryonic digestive tract morphogenesis (ortholog); enteric nervous system development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH childhood-onset asthma (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955520 2937131 2941170 - 102003999 AGCD01068086;GBBH01050416;GBCQ01073054;XM_013507075 XP_013362529 MODEL 9043410 ncrna LOC102023360 uncharacterized LOC102023360 NW_004955418 8489605 8491347 + 102023360 AGCD01018923;GBDF01179218;XR_260551 MODEL 8702257 protein-coding Dda1 DET1 and DDB1 associated 1 INVOLVED IN protein polyubiquitination (ortholog); ASSOCIATED WITH stomach cancer (ortholog); urinary bladder cancer (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955524 912752 920714 - 102007049 AGCD01068725;AGCD01068726;GBDK01139764;XM_005409525;XM_005409526;XM_005409527;XM_013507242;XM_013507243;XM_013507244;XM_013507245;XM_013507246 XP_005409582;XP_005409583;XP_005409584;XP_013362696;XP_013362697;XP_013362698;XP_013362699;XP_013362700 MODEL 8749502 protein-coding Vwde von Willebrand factor D and EGF domains ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955432 18687192 18752679 - 102003368 AGCD01031157;AGCD01031158;AGCD01031159;XM_005388152 XP_005388209 MODEL 8748366 protein-coding Cwc25 CWC25 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); lymphoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955451 13867570 13884433 - 102019657 AGCD01043509;AGCD01043510;AGCD01043511;AGCD01043512;GBDJ01004357;XM_005394284 XP_005394341 MODEL 8887802 protein-coding LOC102003364 olfactory receptor 9I1-like NW_004955511 2907070 2908010 - 102003364 AGCD01066433;AGCD01066434;XM_013506378 XP_013361832 MODEL 8858720 protein-coding Cuedc2 CUE domain containing 2 INVOLVED IN intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of macrophage cytokine production (ortholog); ASSOCIATED WITH melanoma (ortholog); Mesothelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955485 7969389 7977073 + 102016480 AGCD01058684;GBDF01047348;XM_005403837;XM_005403838;XM_005403839;XM_005403840 XP_005403894;XP_005403895;XP_005403896;XP_005403897 MODEL 8699863 protein-coding Pla2g4f phospholipase A2 group IVF ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN arachidonate secretion (ortholog); cellular response to antibiotic (ortholog); fatty acid transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955416 8876560 8889764 - 102017867 AGCD01017071;GBBH01062799;XM_005381324;XM_005381325;XM_013512650 XP_005381381;XP_005381382;XP_013368104 MODEL 9050442 protein-coding Psmd12 proteasome 26S subunit, non-ATPase 12 INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH amblyopia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955478 6536207 6558156 - 102010055 AGCD01055900;GBCB01003349;XM_005402153 XP_005402210 MODEL 8796026 ncrna LOC102004776 uncharacterized LOC102004776 NW_004955405 37643987 37648127 + 102004776 AGCD01005457;GBDJ01389922;XR_259437 MODEL 8930203 protein-coding Begain brain enriched guanylate kinase associated INVOLVED IN evoked excitatory postsynaptic potential (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955438 21572080 21580311 - 102018650 AGCD01035547;GBDF01209194;XM_013517281 XP_013372735 MODEL 9012848 protein-coding Golga2 golgin A2 ENCODES a protein that exhibits identical protein binding (ortholog); importin-alpha family protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN asymmetric cell division (ortholog); centrosome cycle (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955570 782218 799044 - 102023086 AGCD01074765;AGCD01074766;GBDK01012403;XM_005413532;XM_013509386;XM_013509387;XM_013509388;XM_013509389 XP_005413589;XP_013364840;XP_013364841;XP_013364842;XP_013364843 MODEL 10326771 ncrna LOC106149231 uncharacterized LOC106149231 NW_004955440 19846244 19855130 - 106149231 AGCD01036646;GBDK01126024;XR_001235276 MODEL 8831256 protein-coding Nts neurotensin ENCODES a protein that exhibits neuropeptide receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to lithium ion (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH Bradycardia (ortholog); Catalepsy (ortholog); depressive disorder (ortholog); FOUND IN axon terminus (ortholog); neuronal cell body (ortholog) NW_004955405 23696258 23758487 + 102006537 AGCD01005134;AGCD01005135;AGCD01005136;GBDK01406517;XM_005374412;XM_013518119 XP_005374469;XP_013373573 MODEL 39132459 snrna U6 U6 spliceosomal RNA 8922155 pseudo LOC102005812 G kinase-anchoring protein 1 pseudogene NW_004955488 1169951 1171056 + 102005812 AGCD01059491 MODEL 10383227 ncrna LOC106150020 uncharacterized LOC106150020 NW_004955460 11158234 11160468 + 106150020 AGCD01048630;GBCQ01163568;XR_001236542 MODEL 8853528 protein-coding Khdc4 KH domain containing 4, pre-mRNA splicing factor ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splice site recognition (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 2100440 2120412 - 102012806 AGCD01071884;AGCD01071885;GBDF01049228;XM_005411624;XM_005411625;XM_005411626 XP_005411681;XP_005411682;XP_005411683 MODEL 15036845 trna Trnastop-uua transfer RNA ochre suppressor(anticodon UUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978849 8723360 ncrna LOC102011884 uncharacterized LOC102011884 NW_004955424 343712 352617 - 102011884 AGCD01024172;AGCD01024173;GBDF01052736;XR_261019 MODEL 39132594 rrna 5S_rRNA 5S ribosomal RNA 9020772 pseudo LOC102013402 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955413 383694 386168 - 102013402 AGCD01013462 MODEL 10207227 ncrna LOC106147078 uncharacterized LOC106147078 NW_004955408 33677059 33867164 + 106147078 AGCD01008879;AGCD01008880;AGCD01008881;AGCD01008882;AGCD01008883;AGCD01008884;AGCD01008885;AGCD01008886;AGCD01008887;GBDF01238133;XR_001231808 MODEL 8760138 protein-coding Fgfr1 fibroblast growth factor receptor 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); auditory receptor cell development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN ceric oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acrocephalosyndactylia (ortholog); acute myeloid leukemia (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955463 14013247 14064354 - 102024657 AGCD01049897;AGCD01049898;AGCD01049899;GBDJ01132958;XM_005398449;XM_013521506;XM_013521508;XM_013521509;XM_013521510;XM_013521511;XM_013521512 XP_005398506;XP_013376960;XP_013376962;XP_013376963;XP_013376964;XP_013376965;XP_013376966 MODEL 8827805 protein-coding LOC102003007 vomeronasal type-1 receptor 4-like NW_004955465 13056058 13056990 - 102003007 AGCD01050581;XM_005399004 XP_005399061 MODEL 8836665 pseudo LOC102003366 protein archease pseudogene NW_004955513 4104178 4104694 + 102003366 AGCD01066919 MODEL 9061756 protein-coding Ncoa6 nuclear receptor coactivator 6 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); enzyme binding (ortholog); INVOLVED IN brain development (ortholog); DNA damage response (ortholog); DNA-templated transcription initiation (ortholog); PARTICIPATES IN estrogen signaling pathway; glucocorticoid signaling pathway; histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); FOUND IN histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog); nucleoplasm (ortholog) NW_004955422 26564535 26639516 + 102019285 AGCD01023292;AGCD01023293;AGCD01023294;GBDJ01115933;XM_005384819;XM_005384820;XM_005384822;XM_005384823;XM_013514087;XM_013514088 XP_005384876;XP_005384877;XP_005384879;XP_005384880;XP_013369541;XP_013369542 MODEL 8915173 protein-coding Ddah1 dimethylarginine dimethylaminohydrolase 1 ENCODES a protein that exhibits dimethylargininase activity (ortholog); nitric-oxide synthase inhibitor activity (ortholog); INVOLVED IN L-arginine catabolic process (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of cellular response to hypoxia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cardiovascular system disease (ortholog); coronary artery disease (ortholog) NW_004955423 8637116 8673881 + 102024696 AGCD01023635;GBDF01159806;XM_005385138 XP_005385195 MODEL 9000861 pseudo LOC102010721 TRMT1-like protein pseudogene NW_004955431 1011390 1013166 - 102010721 AGCD01029888 MODEL 8770222 protein-coding Fam186b family with sequence similarity 186 member B ASSOCIATED WITH nephronophthisis (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955547 198336 232031 - 102004522 AGCD01072137;AGCD01072138;AGCD01072139;AGCD01072140;GBDF01008362;XM_005411837;XM_005411840;XM_013508463;XM_013508464;XM_013508465 XP_005411894;XP_005411897;XP_013363917;XP_013363918;XP_013363919 MODEL 8895061 protein-coding Mtmr9 myotubularin related protein 9 ENCODES a protein that exhibits enzyme regulator activity (ortholog); phosphatase activator activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); positive regulation of phosphatase activity (ortholog); protein stabilization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); Metabolic Syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); protein-containing complex (ortholog) NW_004955403 52689101 52732354 + 102025751 AGCD01003014;AGCD01003015;AGCD01003016;GBDF01048526;XM_005373811 XP_005373868 MODEL 9056964 ncrna LOC102007618 uncharacterized LOC102007618 NW_004955452 2440793 2444300 - 102007618 AGCD01043895;GBDK01010271;XR_262640 MODEL 8787656 pseudo LOC102005128 adenylate kinase 4, mitochondrial pseudogene NW_004955412 30505705 30506289 - 102005128 AGCD01013301 MODEL 9039575 protein-coding Fzd7 frizzled class receptor 7 ENCODES a protein that exhibits frizzled binding (ortholog); PDZ domain binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); mesenchymal to epithelial transition (ortholog); negative regulation of cardiac muscle cell differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; Wnt signaling pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH nephroblastoma (ortholog); FOUND IN endosome membrane (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) NW_004955457 12729277 12733057 - 102009465 AGCD01047025;GBCB01025222;GBDI01168653;XM_013520752 XP_013376206 MODEL 10141913 protein-coding Serpina10 serpin family A member 10 INVOLVED IN liver regeneration (ortholog); regulation of acrosome reaction (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); Liver Metastasis (ortholog) NW_004955438 16335201 16345093 - 106149168 AGCD01035404;AGCD01035405;XM_013517250;XM_013517251 XP_013372704;XP_013372705 MODEL 8838619 ncrna LOC102023362 uncharacterized LOC102023362 NW_004955419 14127307 14131078 + 102023362 AGCD01020012;GBDF01288602;XR_260629 MODEL 8972605 ncrna LOC102017945 uncharacterized LOC102017945 NW_004955405 7621676 7626930 + 102017945 AGCD01004721;GBDF01304497;XR_001236107;XR_259363 MODEL 8822377 protein-coding B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 ENCODES a protein that exhibits lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity (ortholog); INVOLVED IN central nervous system development (ortholog) NW_004955420 24029867 24061801 - 102004824 AGCD01021270;GBDI01088265;XM_005383366;XM_005383367;XM_013513469;XR_001233722;XR_001233723 XP_005383423;XP_005383424;XP_013368923 MODEL 8895758 protein-coding Hcrt hypocretin neuropeptide precursor ENCODES a protein that exhibits neuropeptide activity (ortholog); neuropeptide hormone activity (ortholog); type 1 orexin receptor binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); drinking behavior (ortholog); eating behavior (ortholog); PARTICIPATES IN orexin/hypocretin signaling pathway; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 2; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis dependence (ortholog); cocaine abuse (ortholog); FOUND IN cytoplasmic vesicle (ortholog); neuronal dense core vesicle lumen (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955451 16235819 16237457 - 102015590 AGCD01043662;XM_005394450 XP_005394507 MODEL 39134452 misc_rna 7SK 7SK RNA 9055587 pseudo LOC102008782 protein SET-like NW_004955563 171952 176650 - 102008782 AGCD01074050;AGCD01074051 MODEL 8814219 ncrna LOC102007282 uncharacterized LOC102007282 NW_004955442 18390450 18391001 - 102007282 AGCD01038005;GBDK01116847;XR_001235431 MODEL 39134141 misc_rna 7SK 7SK RNA 8841477 protein-coding Gjb3 gap junction protein beta 3 INVOLVED IN cellular response to retinoic acid (ortholog); in utero embryonic development (ortholog); placenta development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 2B (ortholog); autosomal recessive nonsyndromic deafness 1A (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955452 12892687 12896290 + 102013046 AGCD01044370;GBCE01170050;XM_005395124 XP_005395181 MODEL 8729956 ncrna LOC102025076 uncharacterized LOC102025076 NW_004955405 30094101 30106864 + 102025076 AGCD01005263;GBDF01286792;XR_259413 MODEL 9024072 protein-coding LOC102009925 olfactory receptor 8B12-like NW_004955412 25567776 25568708 - 102009925 AGCD01013160;XM_005378426 XP_005378483 MODEL 8758197 ncrna LOC102012264 uncharacterized LOC102012264 NW_004955403 2898337 2898936 + 102012264 AGCD01001740;GBDJ01216344;XR_259140 MODEL 8857313 protein-coding Bend2 BEN domain containing 2 INVOLVED IN chromatin organization (ortholog); double-strand break repair (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955519 104726 155418 + 102029432 AGCD01067855;GBDF01303209;XM_013506980;XM_013506981 XP_013362434;XP_013362435 MODEL 39131664 rrna 5S_rRNA 5S ribosomal RNA 8793455 protein-coding LOC102021298 putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8 NW_004956458 3484 4133 + 102021298 AGCD01079630;XM_005415201 XP_005415258 MODEL 8980547 protein-coding Myof myoferlin ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cellular response to heat (ortholog); glycerol metabolic process (ortholog); muscle cell development (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN caveola (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955425 24037 175211 + 102004183 AGCD01025173;AGCD01025174;AGCD01025175;GBDK01082816;XM_005385818 XP_005385875 MODEL 9028731 pseudo LOC102006179 histidine triad nucleotide-binding protein 1 pseudogene NW_004955575 1174358 1174782 + 102006179 AGCD01075234 MODEL 39132460 snrna U6 U6 spliceosomal RNA 8827586 pseudo LOC102024389 laccase domain-containing protein 1 pseudogene NW_004955444 15864562 15865847 - 102024389 AGCD01039157 MODEL 9043427 protein-coding Cry1 cryptochrome circadian regulator 1 ENCODES a protein that exhibits deoxyribodipyrimidine photo-lyase activity (ortholog); DNA (6-4) photolyase activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); alcohol withdrawal syndrome (ortholog); antidepressant type abuse (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955405 40878227 40941664 - 102026388 AGCD01005537;AGCD01005538;GBCB01042575;GBDJ01274072;XM_005374636 XP_005374693 MODEL 8777181 protein-coding Hm13 histocompatibility minor 13 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); peptidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); membrane protein ectodomain proteolysis (ortholog); membrane protein intracellular domain proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Herpesviridae Infections (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); Derlin-1 retrotranslocation complex (ortholog) NW_004955422 29365722 29408788 - 102020578 AGCD01023393;GBCE01082590;XM_005384908;XM_005384909;XM_005384910;XM_005384911;XR_001233957 XP_005384965;XP_005384966;XP_005384967;XP_005384968 MODEL 8732503 protein-coding Cwc27 CWC27 spliceosome associated cyclophilin ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955446 4032493 4230444 - 102022030 AGCD01040031;AGCD01040032;AGCD01040033;AGCD01040034;GBDI01292969;XM_005392634;XM_013518444 XP_005392691;XP_013373898 MODEL 9050014 ncrna LOC102023363 uncharacterized LOC102023363 NW_004955420 10881689 10909589 + 102023363 AGCD01020795;AGCD01020796;GBDF01306314;XR_260698 MODEL 8852667 protein-coding Vwf von Willebrand factor ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); blood coagulation (ortholog); cell adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955413 3672470 3825588 - 102010886 AGCD01013578;AGCD01013579;AGCD01013580;AGCD01013581;AGCD01013582;AGCD01013583;AJ238385;GBDK01001413;XM_005378754;XM_005378755 CAB86185;XP_005378811;XP_005378812 MODEL 8888377 pseudo LOC102022647 B-cell CLL/lymphoma 7 protein family member C pseudogene NW_004955445 7513797 7515845 - 102022647 AGCD01039543 MODEL 8746723 protein-coding Cul1 cullin 1 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); cell population proliferation (ortholog); PARTICIPATES IN neddylation pathway; Notch signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog); nucleus (ortholog); Parkin-FBXW7-Cul1 ubiquitin ligase complex (ortholog) NW_004955491 4165400 4212483 + 102026875 AGCD01060419;AGCD01060420;GBDF01010811;XM_005404888 XP_005404945 MODEL 8972985 protein-coding Art1 ADP-ribosyltransferase 1 ENCODES a protein that exhibits NAD+ poly-ADP-ribosyltransferase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); uveal melanoma (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) NW_004955414 19465969 19487859 + 102007540 AGCD01015318;AGCD01015319;AGCD01015320;AGCD01081640;GBCB01020800;XM_005380024;XM_005380025 XP_005380081;XP_005380082 MODEL 8884575 pseudo LOC102003008 DPY30 domain-containing protein 2 pseudogene NW_004955413 2319331 2319955 + 102003008 AGCD01013544 MODEL 39134453 misc_rna 7SK 7SK RNA 10367736 pseudo LOC106147079 high mobility group protein B1-like NW_004955516 4767150 4767759 + 106147079 AGCD01067536 MODEL 9054031 protein-coding Ncoa7 nuclear receptor coactivator 7 ENCODES a protein that exhibits nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog); negative regulation of peptidyl-cysteine S-nitrosylation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955436 7110879 7238509 + 102003172 AGCD01033702;AGCD01033703;AGCD01033704;GBCQ01000043;XM_005389157;XM_005389158;XM_005389159;XM_005389160;XM_013516644 XP_005389214;XP_005389215;XP_005389216;XP_005389217;XP_013372098 MODEL 8893304 pseudo LOC102022999 U1 small nuclear ribonucleoprotein C pseudogene NW_004955454 3602309 3602766 - 102022999 AGCD01045094 MODEL 8765103 protein-coding Golga3 golgin A3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955482 272430 313499 + 102017337 AGCD01057168;AGCD01057169;GBDJ01410803;XM_005402941;XM_005402942 XP_005402998;XP_005402999 MODEL 153211033 mirna MIR668 microRNA 668 10117661 ncrna LOC106149232 uncharacterized LOC106149232 NW_004955440 15130652 15151912 + 106149232 AGCD01036486;GBCB01027680;XR_001235277 MODEL 8874391 ncrna LOC102005816 uncharacterized LOC102005816 NW_004955423 3544871 3634123 + 102005816 AGCD01023515;AGCD01023516;GBDF01047727;XR_260951 MODEL 8800944 protein-coding Ntsr1 neurotensin receptor 1 ENCODES a protein that exhibits G protein-coupled neurotensin receptor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell surface (ortholog) NW_004955528 1348616 1394798 - 102024502 AGCD01069561;AGCD01069562;GBDF01263293;XM_005410013 XP_005410070 MODEL 8874476 protein-coding LOC102009926 chromosome unknown open reading frame, human C12orf57 INVOLVED IN camera-type eye morphogenesis (ortholog); cognition (ortholog); corpus callosum morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog) NW_004955413 4524236 4525760 + 102009926 AGCD01013621;GBDI01019226;XM_005378850 XP_005378907 MODEL 10262080 ncrna LOC106150021 uncharacterized LOC106150021 NW_004955460 11121174 11128894 - 106150021 AGCD01048629;XR_001236543;XR_001236544 MODEL 8714450 trna Trnat-agu transfer RNA threonine (anticodon AGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978810 AGCD01035275;AGCD01037196;AGCD01050588;AGCD01050597;AGCD01051466;AGCD01051472;AGCD01051842;AGCD01057606;AGCD01071886 MODEL 39132600 rrna 5S_rRNA 5S ribosomal RNA 8702352 pseudo LOC102011889 KATNB1-like protein 1 NW_004955426 24920133 24920909 - 102011889 AGCD01026698 MODEL 8844030 protein-coding Pla2g5 phospholipase A2 group V ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN arachidonate secretion (ortholog); leukotriene biosynthetic process (ortholog); low-density lipoprotein particle remodeling (ortholog); ASSOCIATED WITH familial benign fleck retina (ortholog); late-onset retinal degeneration (ortholog); sarcoma (ortholog); FOUND IN cell surface (ortholog); early phagosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955452 662281 721507 + 102015593 AGCD01043822;AGCD01043823;AGCD01043824;AGCD01043825;AGCD01043826;AGCD01043827;GBDJ01199830;XM_005394670;XM_005394671;XM_005394672;XM_013519728;XM_013519729;XM_013519730 XP_005394727;XP_005394728;XP_005394729;XP_013375182;XP_013375183;XP_013375184 MODEL 8713119 ncrna LOC102003369 uncharacterized LOC102003369 NW_004955518 211147 307647 + 102003369 AGCD01067721;AGCD01067722;AGCD01067723;AGCD01067724;AGCD01067725;AGCD01067726;AGCD01067727;GBDF01095069;XR_001231851;XR_001231852 MODEL 8891186 pseudo LOC102004783 histone deacetylase 8 pseudogene NW_004955456 1940192 1940884 - 102004783 AGCD01046243 MODEL 8831366 protein-coding Hcrtr1 hypocretin receptor 1 ENCODES a protein that exhibits orexin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; orexin/hypocretin signaling pathway; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cocaine-Related Disorders (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 10026464 10036267 + 102010663 AGCD01044267;XM_005395029;XM_005395030;XM_013519463 XP_005395086;XP_005395087;XP_013374917 MODEL 8993982 protein-coding LOC102008784 leukocyte immunoglobulin-like receptor subfamily A member 2 NW_004955567 1128512 1147473 + 102008784 AGCD01074460;GBDK01141152;XM_013509292;XM_013509293;XM_013509294;XM_013509295;XM_013509296;XM_013509297;XM_013509298;XM_013509299;XR_001232407 XP_013364746;XP_013364747;XP_013364748;XP_013364749;XP_013364750;XP_013364751;XP_013364752;XP_013364753 MODEL 9052128 protein-coding Fam187b family with sequence similarity 187 member B ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955468 4517513 4539959 - 102013494 AGCD01051912;AGCD01051913;AGCD01051914;AGCD01051915;AGCD01051916;GBDF01006134;XM_005400031;XM_005400032;XM_005400033 XP_005400088;XP_005400089;XP_005400090 MODEL 8969040 pseudo LOC102025077 crooked neck-like protein 1 NW_004955405 23721294 23723863 - 102025077 AGCD01005135 MODEL 39131665 rrna 5S_rRNA 5S ribosomal RNA 8821262 protein-coding Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); poly(A) binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of RNA export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); Grb2-Sos complex (ortholog); membrane (ortholog) NW_004955452 10413883 10458518 + 102014204 AGCD01044275;AGCD01044276;GBDF01047207;XM_005395038;XR_001236051;XR_262674 XP_005395095 MODEL 151707884 mirna MIR671 microRNA 671 8789422 pseudo LOC102017946 cytochrome c oxidase subunit 7B, mitochondrial pseudogene NW_004955452 16315978 16316312 + 102017946 AGCD01044505 MODEL 8995791 protein-coding LOC102013405 cytochrome P450 2D17-like NW_004955413 27621018 27639195 - 102013405 AGCD01014521;AGCD01014522;AGCD01014523;AGCD01014524;AGCD01014525;AGCD01014526;GBBH01145942;XM_013511462 XP_013366916 MODEL 8889435 protein-coding Psmd13 proteasome 26S subunit, non-ATPase 13 INVOLVED IN meiosis I (ortholog); regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955476 11782461 11794839 - 102029619 AGCD01055474;GBDJ01072396;XM_005401886 XP_005401943 MODEL 8749708 protein-coding B3gnt6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog) NW_004955414 14728067 14729896 - 102010895 AGCD01015156;XM_013512055 XP_013367509 MODEL 8814652 pseudo LOC102022651 mitochondrial import inner membrane translocase subunit Tim9 pseudogene NW_004955448 10995715 10996226 + 102022651 AGCD01041510;XM_005393162 MODEL 8995744 ncrna LOC102011891 uncharacterized LOC102011891 NW_004955429 17730248 17732306 - 102011891 AGCD01028865;GBDF01041050;XR_261353 MODEL 8775106 ncrna LOC102010723 uncharacterized LOC102010723 NW_004955518 2285051 2292236 + 102010723 AGCD01067775;GBBH01218705;XR_264568 MODEL 8967697 protein-coding Cwf19l1 CWF19 like cell cycle control factor 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 17 (ortholog); FOUND IN nucleus (ortholog) NW_004955507 6106245 6136305 - 102021153 AGCD01065697;GBCQ01175305;XM_005407687;XM_005407688;XM_013506212;XM_013506213 XP_005407744;XP_005407745;XP_013361666;XP_013361667 MODEL 8772556 ncrna LOC102007285 uncharacterized LOC102007285 NW_004955447 3220418 3236619 + 102007285 AGCD01040582;GBCQ01008302;XR_262410 MODEL 39134142 misc_rna 7SK 7SK RNA 9012377 ncrna LOC102005131 uncharacterized LOC102005131 NW_004955413 25513569 25515865 - 102005131 AGCD01014408;AGCD01014409;GBDK01271867;XR_001233049;XR_260114 MODEL 8867245 protein-coding Gjb4 gap junction protein beta 4 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); gap junction-mediated intercellular transport (ortholog); olfactory behavior (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 3A (ortholog); epidermolytic hyperkeratosis (ortholog); erythrokeratodermia variabilis (ortholog); FOUND IN cell junction (ortholog); connexin complex (ortholog); plasma membrane (ortholog) NW_004955452 12871548 12874019 + 102012397 AGCD01044369;GBCE01005791;XM_013519685 XP_013375139 MODEL 10368629 ncrna LOC106147080 uncharacterized LOC106147080 NW_004955408 35085904 35095761 + 106147080 AGCD01008930;GBDF01166002;XR_001231809 MODEL 8724020 ncrna LOC102012268 uncharacterized LOC102012268 NW_004955403 25880625 25907260 + 102012268 AGCD01002295;GBDF01251079;XR_001233582;XR_001233583;XR_259202 MODEL 8990353 pseudo LOC102023010 iron-sulfur cluster assembly 1 homolog, mitochondrial pseudogene NW_004955409 23655947 23657129 + 102023010 AGCD01010069 MODEL 8823096 protein-coding Fzd8 frizzled class receptor 8 ENCODES a protein that exhibits PDZ domain binding (ortholog); signaling receptor binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN angiogenesis (ortholog); canonical Wnt signaling pathway (ortholog); positive regulation of JUN kinase activity (ortholog); PARTICIPATES IN Wnt signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN neuronal dense core vesicle (ortholog); plasma membrane (ortholog); Wnt-Frizzled-LRP5/6 complex (ortholog) NW_004955462 5870410 5873714 + 102028622 AGCD01049263;AGCD01049264;GBCE01001278;XM_005398320 XP_005398377 MODEL 8867892 protein-coding Bend3 BEN domain containing 3 ENCODES a protein that exhibits rDNA binding (ortholog); INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of ATP metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN heterochromatin (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955411 32346573 32384796 - 102008512 AGCD01012309;GBDF01161780;XM_005377836;XM_013510795;XM_013510796;XM_013510797 XP_005377893;XP_013366249;XP_013366250;XP_013366251 MODEL 9029030 ncrna LOC102021300 uncharacterized LOC102021300 NW_004955404 13235320 13236944 - 102021300 AGCD01003481;GBDF01280967;XR_259307 MODEL 8936891 protein-coding LOC102006182 arylacetamide deacetylase-like NW_004955448 3031084 3044420 + 102006182 AGCD01041300;AGCD01041301;GBBH01008796;XM_005393036 XP_005393093 MODEL 8811892 protein-coding Myog myogenin ENCODES a protein that exhibits chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to lithium ion (ortholog); ASSOCIATED WITH Experimental Arthritis (ortholog); Experimental Autoimmune Myasthenia Gravis (ortholog); obesity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955406 39099044 39102479 - 102006740 AGCD01006618;GBCB01072971;XM_005375246;XM_005375247 XP_005375303;XP_005375304 MODEL 39132461 snrna U6 U6 spliceosomal RNA 8863448 protein-coding Serpina12 serpin family A member 12 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); negative regulation of gluconeogenesis (ortholog); negative regulation of lipid biosynthetic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); mal de Meleda (ortholog); Metabolic Syndrome (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955438 17826596 17849341 + 102020610 AGCD01035454;AGCD01035455;GBDF01057280;XM_005390390;XM_013517145 XP_005390447;XP_013372599 MODEL 8968573 trna Trnat-cgu transfer RNA threonine (anticodon CGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955442;NW_004955465;NW_004955465;NW_004955481 4512289;13846174;13285428;6565067 4512360;13846247;13285500;6565138 -;+;+;+ 101978813 AGCD01037528;AGCD01050597;AGCD01050627;AGCD01057031 MODEL 9010852 protein-coding Fgfr1op2 FGFR1 oncogene partner 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN wound healing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); myeloid neoplasm (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 21814133 21843105 + 102006561 AGCD01014267;AGCD01014268;GBDF01126930;XM_005379112;XM_005379113;XM_005379114;XM_005379115 XP_005379169;XP_005379170;XP_005379171;XP_005379172 MODEL 8948341 protein-coding Cry2 cryptochrome circadian regulator 2 ENCODES a protein that exhibits damaged DNA binding (ortholog); deoxyribodipyrimidine photo-lyase activity (ortholog); DNA (6-4) photolyase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol withdrawal syndrome (ortholog); cholangiocarcinoma (ortholog); FOUND IN Cry-Per complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 2084020 2114980 - 102018839 AGCD01022479;AGCD01022480;GBDF01006250;XM_005384066;XM_013514038 XP_005384123;XP_013369492 MODEL 8900255 pseudo LOC102017947 sorting nexin-6 pseudogene NW_004955405 9414066 9415333 + 102017947 AGCD01004772 MODEL 8771443 protein-coding Vxn vexin INVOLVED IN neurogenesis (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) NW_004955444 12659894 12684919 - 102016529 AGCD01039078;GBCQ01140368;XM_005392150;XM_005392151;XM_005392152 XP_005392207;XP_005392208;XP_005392209 MODEL 8761605 protein-coding Cul2 cullin 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955462 2580117 2659849 + 102019037 AGCD01049176;AGCD01049177;GBDI01222773;XM_005398124;XM_013521460;XM_013521461;XM_013521462 XP_005398181;XP_013376914;XP_013376915;XP_013376916 MODEL 9063130 protein-coding Pla2g6 phospholipase A2 group VI ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); ATP-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); cardiolipin acyl-chain remodeling (ortholog); maternal process involved in female pregnancy (ortholog); PARTICIPATES IN angiotensin II signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Adducted Thumbs Syndrome (ortholog); Ataxia (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); mitochondrion (ortholog) NW_004955413 24431592 24482229 - 102015394 AGCD01014367;AGCD01014368;GBBH01227983;XM_005379242;XM_005379243 XP_005379299;XP_005379300 MODEL 39134454 misc_rna 7SK 7SK RNA 8993979 protein-coding LOC102007626 keratin-associated protein 20-1-like NW_004955407 30169411 30169593 + 102007626 AGCD01007628;XM_005375642 XP_005375699 MODEL 9038333 protein-coding Ncor1 nuclear receptor corepressor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute-Phase Reaction (ortholog); anxiety disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); histone deacetylase complex (ortholog) NW_004955467 1408292 1568539 - 102012299 AGCD01051264;AGCD01051265;AGCD01051266;AGCD01051267;AGCD01051268;GBDF01045203;GBDI01072467;XM_013522047 XP_013377501 MODEL 8850642 protein-coding Golga4 golgin A4 ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955421 4130040 4251968 + 102008540 AGCD01021680;AGCD01021681;AGCD01021682;AGCD01021683;AGCD01021684;AGCD01021685;AGCD01021686;GBCB01002191;XM_005383706;XM_005383707;XM_005383709;XM_013513730 XP_005383763;XP_005383764;XP_005383766;XP_013369184 MODEL 8821769 protein-coding LOC102005821 transcription elongation factor A protein-like 3 NW_004955503 8192530 8194504 + 102005821 AGCD01064812;GBDI01313611;XM_005406978 XP_005407035 MODEL 8721050 pseudo LOC102009927 centrin-3 pseudogene NW_004955467 10028525 10029023 + 102009927 AGCD01051543 MODEL 8876781 protein-coding Insyn1 inhibitory synaptic factor 1 INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); inhibitory postsynaptic potential (ortholog); postsynaptic specialization organization (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic specialization (ortholog) NW_004955450 3857563 3867905 + 102023094 AGCD01042446;GBDJ01311313;XM_005393590 XP_005393647 MODEL 8753136 ncrna LOC102023012 uncharacterized LOC102023012 NW_004955463 6158930 6199332 + 102023012 AGCD01049657;AGCD01049658;AGCD01049659;GBDF01178775;XR_263154 MODEL 39132602 rrna 5S_rRNA 5S ribosomal RNA 8794434 protein-coding Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 ENCODES a protein that exhibits poly(A) binding (ortholog); poly(U) RNA binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955502 1486799 1944298 + 102025140 AGCD01064274;AGCD01064275;AGCD01064276;AGCD01064277;AGCD01064278;AGCD01064279;AGCD01064280;AGCD01064281;AGCD01064282;AGCD01064283;AGCD01064284;AGCD01064285;AGCD01064286;AGCD01064287;GBCQ01021020;XM_005406879 XP_005406936 MODEL 8721935 protein-coding Hmbox1 homeobox containing 1 ENCODES a protein that exhibits double-stranded telomeric DNA binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); telomere maintenance via telomerase (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 51199547 51377249 + 102016774 AGCD01002988;AGCD01002989;GBDF01220457;XM_005373783;XM_005373787;XM_005373788;XM_005373789;XM_005373790;XM_013514363 XP_005373840;XP_005373844;XP_005373845;XP_005373846;XP_005373847;XP_013369817 MODEL 8776857 ncrna LOC102003012 uncharacterized LOC102003012 NW_004955470 10615968 10634986 + 102003012 AGCD01052872;GBDF01190714;XR_263493 MODEL 8746306 protein-coding LOC102013406 olfactory receptor 6-like NW_004955414 22692862 22693770 - 102013406 AGCD01015471;GBBH01130436;XM_005380511 XP_005380568 MODEL 9011623 pseudo LOC102004784 40S ribosomal protein S8 pseudogene NW_004955457 6388635 6389329 - 102004784 AGCD01046838 MODEL 8757341 protein-coding B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN keratan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955453 4178544 4180738 - 102007404 AGCD01044682;GBBH01150502;GBDJ01011170;XM_013519878 XP_013375332 MODEL 8904989 protein-coding Hcrtr2 hypocretin receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); orexin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; orexin/hypocretin signaling pathway; ASSOCIATED WITH hyperglycemia (ortholog); melanoma (ortholog); narcolepsy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955411 970892 1010138 - 102008075 AGCD01011469;AGCD01011470;AGCD01011471;GBDF01277185;GBDF01277186;XM_013510721 XP_013366175 MODEL 39134143 misc_rna 7SK 7SK RNA 8830207 protein-coding Fam193a family with sequence similarity 193 member A INVOLVED IN positive regulation of signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955514 1588882 1672292 + 102025496 AGCD01067058;GBCE01024294;XM_005408737;XM_013506797;XM_013506798;XR_264493 XP_005408794;XP_013362251;XP_013362252 MODEL 10157374 ncrna LOC106147081 uncharacterized LOC106147081 NW_004955517 995794 1004546 + 106147081 AGCD01067588;GBCE01159944;XR_001231810;XR_001231811 MODEL 9065396 pseudo LOC102024392 keratin, type I cytoskeletal 18 pseudogene NW_004955445 5900650 5901318 - 102024392 AGCD01039475 MODEL 10101218 ncrna LOC106150022 uncharacterized LOC106150022 NW_004955460 8179 30699 + 106150022 AGCD01048326;AGCD01048327;AGCD01048328;AGCD01048329;GBDF01187346;XR_001236545;XR_001236546 MODEL 8743635 protein-coding Fzd9 frizzled class receptor 9 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); Wnt receptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); bone regeneration (ortholog); learning or memory (ortholog); PARTICIPATES IN Wnt signaling pathway; ASSOCIATED WITH Williams-Beuren syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); filopodium membrane (ortholog) NW_004955456 14245994 14247551 - 102013909 AGCD01046637;GBDF01220464;GBDI01316961;XM_005396896 XP_005396953 MODEL 39133695 mirna MIR675 microRNA 675 8949682 pseudo LOC102023365 probable U3 small nucleolar RNA-associated protein 11 pseudogene NW_004955486 1392411 1393168 + 102023365 AGCD01058949 MODEL 8979472 ncrna LOC102021311 uncharacterized LOC102021311 NW_004955407 37939818 37945531 - 102021311 AGCD01007789;XR_259622 MODEL 8823121 pseudo LOC102003373 bile acid receptor-like NW_004955435 18126734 18135541 + 102003373 AGCD01033389;AGCD01033390 MODEL 8830585 protein-coding Art3 ADP-ribosyltransferase 3 (inactive) ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955433 743631 850612 + 102009534 AGCD01031336;AGCD01031337;AGCD01031338;AGCD01031339;GBDF01010282;XM_005388166;XM_005388167;XM_005388168;XM_005388169;XM_005388170;XM_005388171;XM_005388172;XM_005388173;XM_005388174;XM_005388175;XM_005388176;XM_005388177;XM_013516261;XM_013516262;XM_013516263;XM_013516264;XM_013516265 XP_005388223;XP_005388224;XP_005388225;XP_005388226;XP_005388227;XP_005388228;XP_005388229;XP_005388230;XP_005388231;XP_005388232;XP_005388233;XP_005388234;XP_013371715;XP_013371716;XP_013371717;XP_013371718;XP_013371719 MODEL 10080987 ncrna LOC106149233 uncharacterized LOC106149233 NW_004955440 11046882 11078965 + 106149233 AGCD01036401;GBDK01107027;XR_001235278;XR_001235279;XR_001235280 MODEL 8744166 protein-coding LOC102010724 putative inactive carboxylesterase 4 NW_004955433 13538663 13552591 - 102010724 AGCD01031695;XM_013516106 XP_013371560 MODEL 8740038 protein-coding Wac WW domain containing adaptor with coiled-coil ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adrenal Insufficiency (ortholog); anxiety disorder (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955462 2358842 2435644 + 102015612 AGCD01049165;AGCD01049166;GBBH01064776;XM_005398110;XM_013521376;XM_013521377;XM_013521378;XM_013521379;XM_013521380 XP_005398167;XP_013376830;XP_013376831;XP_013376832;XP_013376833;XP_013376834 MODEL 39134455 misc_rna 7SK 7SK RNA 8951351 pseudo LOC102008786 coiled-coil domain-containing protein 152-like NW_004955569 1719680 1720876 - 102008786 AGCD01074678 MODEL 8709119 protein-coding LOC102007286 prolactin-like NW_004955576 959769 969369 + 102007286 AGCD01075349;GBDK01091111;XM_005413940 XP_005413997 MODEL 8882673 ncrna LOC102005132 uncharacterized LOC102005132 NW_004955470 10770420 10783689 - 102005132 AGCD01052876;AGCD01052877;GBDF01112853;XR_263499;XR_263500 MODEL 9037821 protein-coding Ntsr2 neurotensin receptor 2 ENCODES a protein that exhibits G protein-coupled neurotensin receptor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN exploration behavior (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cell surface (ortholog); dendritic shaft (ortholog); membrane (ortholog) NW_004955487 6121277 6136030 - 102019815 AGCD01059355;AGCD01059356;AGCD01059357;AGCD01059358;XM_013504337 XP_013359791 MODEL 8902037 pseudo LOC102025081 60S ribosomal protein L35a pseudogene NW_004955406 33816177 33816497 + 102025081 AGCD01006488 MODEL 8928271 protein-coding Ddah2 DDAH family member 2, ADMA-independent ENCODES a protein that exhibits dimethylargininase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955437 265727 269016 - 102027108 AGCD01034115;GBCQ01040939;XM_005389381;XM_005389382;XM_013516810 XP_005389438;XP_005389439;XP_013372264 MODEL 9067495 protein-coding Gjb5 gap junction protein beta 5 INVOLVED IN epididymis development (ortholog); labyrinthine layer morphogenesis (ortholog); spongiotrophoblast differentiation (ortholog); ASSOCIATED WITH Skin Neoplasms (ortholog) NW_004955452 12867200 12870427 + 102012726 AGCD01044369;GBCE01134793;XM_005395123 XP_005395180 MODEL 9005600 ncrna LOC102012270 uncharacterized LOC102012270 NW_004955451 13227860 13233237 + 102012270 AGCD01043462;GBDK01199688;XR_262601 MODEL 8776481 protein-coding Myom1 myomesin 1 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN extraocular skeletal muscle development (ortholog); positive regulation of cAMP/PKA signal transduction (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiac arrest (ortholog); cervical cancer (ortholog); FOUND IN M band (ortholog); sarcomere (ortholog) NW_004955402 7293415 7418226 + 102016434 AGCD01000170;AGCD01000171;AGCD01000172;AGCD01000173;AGCD01000174;GBCB01003992;GBDF01153494;XM_013518619 XP_013374073 MODEL 8937933 protein-coding Cwf19l2 CWF19 like cell cycle control factor 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); single fertilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); post-mRNA release spliceosomal complex (ortholog); spliceosomal complex (ortholog) NW_004955412 9758751 9861019 - 102027957 AGCD01012746;AGCD01012747;AGCD01012748;AGCD01012749;GBDK01116496;XM_005378021 XP_005378078 MODEL 15036855 trna Trnat-ggu transfer RNA threonine (anticodon GGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978811 39132464 snrna U6 U6 spliceosomal RNA 8995041 protein-coding Fgfr2 fibroblast growth factor receptor 2 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axonogenesis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acne (ortholog); Acneiform Eruptions (ortholog); acrocephalosyndactylia (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955551 2321190 2427000 - 102016104 AGCD01072709;AGCD01072710;AGCD01072711;AGCD01072712;GBBH01063359;GBCC01015608;XM_005412181 XP_005412238 MODEL 8823308 protein-coding Insyn2a inhibitory synaptic factor 2A INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); inhibitory postsynaptic potential (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic specialization (ortholog) NW_004955477 4945431 5003381 - 102012425 AGCD01055589;GBDF01261199;XM_005402006;XM_005402007;XM_005402008 XP_005402063;XP_005402064;XP_005402065 MODEL 8914387 pseudo LOC102022654 translationally-controlled tumor protein pseudogene NW_004955402 29324286 29324804 - 102022654 AGCD01000741 MODEL 8996746 protein-coding Psmd14 proteasome 26S subunit, non-ATPase 14 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); endopeptidase activator activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); protein K63-linked deubiquitination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-associated liver disease (ortholog); autistic disorder (ortholog); FOUND IN cytosolic proteasome complex (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) NW_004955449 12306026 12400908 - 102023649 AGCD01042111;AGCD01042112;GBDF01082613;XM_005393338;XM_005393340 XP_005393395;XP_005393397 MODEL 9024704 protein-coding Cryaa crystallin alpha A ENCODES a protein that exhibits identical protein binding (ortholog); structural molecule activity (ortholog); INVOLVED IN actin filament organization (ortholog); apoptotic process (ortholog); apoptotic process involved in morphogenesis (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); cataract (ortholog); cataract 9 multiple types (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955407 38880088 38892946 - 102004562 AGCD01007813;GBBH01101063;XM_005375792;XM_013506172 XP_005375849;XP_013361626 MODEL 8710025 ncrna LOC102017953 uncharacterized LOC102017953 NW_004955455 12326192 12375978 + 102017953 AGCD01046033;AGCD01046034;AGCD01046035;AGCD01046036;GBCB01036113;XR_262857 MODEL 8987448 protein-coding LOC102003013 olfactory receptor 2S2-like NW_004955472 324392 328281 - 102003013 AGCD01053328;XM_013522926 XP_013378380 MODEL 8935988 protein-coding Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); positive regulation of RNA splicing (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955461 9751057 9926211 + 102020536 AGCD01048952;GBCB01041798;GBCE01159678;XM_005398044 XP_005398101 MODEL 8735089 protein-coding LOC102013407 uncharacterized LOC102013407 NW_004955415 13302201 13314397 + 102013407 AGCD01016246;GBDF01006431;XM_005380747;XM_005380748;XM_005380749;XR_001233193;XR_001233194;XR_001233195;XR_001233196;XR_260288 XP_005380804;XP_005380805;XP_005380806 MODEL 8943198 pseudo LOC102004786 mitochondrial pyruvate carrier 2 pseudogene NW_004955408 33338349 33338731 + 102004786 AGCD01008867 MODEL 8971889 protein-coding Cul3 cullin 3 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); Notch binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; Wnt signaling, canonical pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN centrosome (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955453 9546554 9629976 + 102018560 AGCD01044772;AGCD01044773;AGCD01044774;GBBH01114512;GBCB01007204;XM_013519956 XP_013375410 MODEL 8764937 protein-coding Pla2g7 phospholipase A2 group VII ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); A2-type glycerophospholipase activity (ortholog); phospholipid binding (ortholog); INVOLVED IN lipid oxidation (ortholog); low-density lipoprotein particle remodeling (ortholog); phosphatidylcholine catabolic process (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); high-density lipoprotein particle (ortholog); low-density lipoprotein particle (ortholog) NW_004955437 11534251 11577942 - 102008258 AGCD01034575;AGCD01034576;AGCD01034577;AGCD01034578;GBDJ01386258;XM_005389864;XM_005389865;XM_013517097;XM_013517098;XM_013517099 XP_005389921;XP_005389922;XP_013372551;XP_013372552;XP_013372553 MODEL 39131542 protein-coding HCST hematopoietic cell signal transducer 8871431 protein-coding B3gnt8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955555 357726 359695 - 102018340 AGCD01073024;GBDJ01029590;XM_005412350 XP_005412407 MODEL 39134144 misc_rna 7SK 7SK RNA 8961227 protein-coding Ncor2 nuclear receptor corepressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN cell proliferation in forebrain (ortholog); cerebellum development (ortholog); epidermis development (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered androgen signaling pathway; androgen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); histone deacetylase complex (ortholog); nuclear body (ortholog) NW_004955482 4927482 5031848 + 102010586 AGCD01057317;AGCD01057318;GBDJ01001939;XM_005403008;XM_013503630;XM_013503631;XM_013503632;XM_013503633;XM_013503634;XM_013503635;XM_013503636;XM_013503637;XM_013503638 XP_005403065;XP_013359084;XP_013359085;XP_013359086;XP_013359087;XP_013359088;XP_013359089;XP_013359090;XP_013359091;XP_013359092 MODEL 9035870 protein-coding Mtnap1 mitochondrial nucleoid associated protein 1 INVOLVED IN cell population proliferation (ortholog); mitochondrial DNA metabolic process (ortholog); positive regulation of mitochondrial DNA replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955553 251370 328606 + 102003809 AGCD01072851;AGCD01072852;AGCD01072853;AGCD01072854;GBDF01126559;XM_005412222;XM_013508614;XM_013508615;XM_013508616;XM_013508617;XM_013508618;XM_013508619 XP_005412279;XP_013364068;XP_013364069;XP_013364070;XP_013364071;XP_013364072;XP_013364073 MODEL 9048969 protein-coding Golga5 golgin A5 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi vesicle transport (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); Golgi apparatus (ortholog) NW_004955438 14992710 15031297 + 102028339 AGCD01035356;AGCD01035357;AGCD01035358;GBDF01125139;XM_005390333 XP_005390390 MODEL 8716148 ncrna LOC102009929 uncharacterized LOC102009929 NW_004955468 11697494 11712294 + 102009929 AGCD01052137;GBBH01041129;XR_001236933;XR_263414;XR_263415 MODEL 8735670 pseudo LOC102006187 serine/threonine/tyrosine-interacting protein pseudogene NW_004955588 34411 37242 - 102006187 AGCD01076076;AGCD01076077 MODEL 8930983 protein-coding Fam193b family with sequence similarity 193 member B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955408 29756057 29788349 - 102030157 AGCD01008770;GBDJ01225357;XM_005376449;XM_005376451;XM_005376452;XM_005376455;XM_013506562;XM_013506567;XM_013506571;XM_013506572;XM_013506577;XM_013506583;XR_259726 XP_005376506;XP_005376508;XP_005376509;XP_005376512;XP_013362016;XP_013362021;XP_013362025;XP_013362026;XP_013362031;XP_013362037 MODEL 8802022 pseudo LOC102005826 cyclin-dependent kinase 11B pseudogene NW_004955511 3584330 3587487 - 102005826 AGCD01066468 MODEL 9008967 protein-coding Serpina3 serpin family A member 3 ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Arterial Occlusive Diseases (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog) NW_004955438 17758763 17766113 - 102020287 AGCD01035451;GBCE01004471;XM_005390389 XP_005390446 MODEL 39133646 mirna MIR676 microRNA 676 8783881 protein-coding LOC102023014 phosphatidylinositol 3-kinase regulatory subunit gamma NW_004955464 12100598 12260750 + 102023014 AGCD01050180;AGCD01050181;AGCD01050182;AGCD01050183;AGCD01050184;AGCD01050185;AGCD01050186;AGCD01050187;AGCD01050188;AGCD01050189;GBDF01007439;XM_005398685;XM_005398686;XM_013521606;XM_013521607 XP_005398742;XP_005398743;XP_013377060;XP_013377061 MODEL 8865639 protein-coding LOC102011892 olfactory receptor 9G4 NW_004955511 1843967 1844917 - 102011892 AGCD01066381;XM_005407980 XP_005408037 MODEL 626189154 snorna SNORD88C small nucleolar RNA, C/D box 88C 8784657 protein-coding Hmbs hydroxymethylbilane synthase ENCODES a protein that exhibits amine binding (ortholog); carboxylic acid binding (ortholog); hydroxymethylbilane synthase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte differentiation (ortholog); cellular response to amine stimulus (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute intermittent porphyria (ortholog); Acute Intermittent Porphyria, Nonerythroid Variant (ortholog); FOUND IN axon (ortholog); condensed chromosome (ortholog); cytosol (ortholog) NW_004955412 20192519 20202635 + 102024985 AGCD01012996;GBCQ01034070;XM_005378299;XM_005378300;XM_013511074;XM_013511075 XP_005378356;XP_005378357;XP_013366528;XP_013366529 MODEL 8953506 protein-coding LOC102007627 ral guanine nucleotide dissociation stimulator-like NW_004955407 35377264 35380004 - 102007627 AGCD01007740;GBDF01084243;XM_005375725;XM_013504566 XP_005375782;XP_013360020 MODEL 39131666 rrna 5S_rRNA 5S ribosomal RNA 8948625 protein-coding Bend4 BEN domain containing 4 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); melanoma (ortholog) NW_004955443 5593351 5613569 + 102009230 AGCD01038242;GBBH01170689;XM_005391922 XP_005391979 MODEL 8751383 protein-coding LOC102024394 uncharacterized LOC102024394 NW_004955570 564487 673072 + 102024394 AGCD01074742;AGCD01074743;AGCD01074744;AGCD01074745;AGCD01074746;AGCD01074747;AGCD01074748;AGCD01074749;AGCD01074750;AGCD01074751;AGCD01074752;AGCD01074753;AGCD01074754;XM_013509383 XP_013364837 MODEL 9004088 protein-coding Hdac1 histone deacetylase 1 ENCODES a protein that exhibits chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); deacetylase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); alopecia areata (ortholog); Binge Drinking (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); heterochromatin (ortholog) NW_004955452 10636366 10668873 + 102020300 AGCD01044283;AGCD01044284;AGCD01044285;AGCD01044286;GBDF01047145;XM_005395060 XP_005395117 MODEL 8943527 protein-coding Fzr1 fizzy and cell division cycle 20 related 1 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); lens fiber cell differentiation (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 5481914 5503690 + 102029983 AGCD01062008;AGCD01062009;GBCE01082474;XM_005405862;XM_005405863;XM_005405864 XP_005405919;XP_005405920;XP_005405921 MODEL 8999811 pseudo LOC102023368 coiled-coil domain-containing protein 93 pseudogene NW_004955488 3782918 3784816 + 102023368 AGCD01059584;XR_263998 MODEL 8856910 protein-coding LOC102012271 HAUS augmin-like complex subunit 8 NW_004956214 17 6395 + 102012271 AGCD01079252;GBDI01323698;GBDK01356093;XM_005415178;XM_005415179;XM_005415180;XM_005415181 XP_005415235;XP_005415236;XP_005415237;XP_005415238 MODEL 39132604 rrna 5S_rRNA 5S ribosomal RNA 9061850 ncrna LOC102022657 uncharacterized LOC102022657 NW_004955403 4918680 4938377 - 102022657 AGCD01001800;AGCD01001801;GBDF01112630;XR_259157;XR_259158 MODEL 9065689 protein-coding Fgfr3 fibroblast growth factor receptor 3 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); axonogenesis involved in innervation (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); absence epilepsy (ortholog); acanthosis nigricans (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955514 1030244 1038590 + 102017151 AGCD01067032;GBCE01053787;GBCE01053789;XM_013506763 XP_013362217 MODEL 8818740 protein-coding Insyn2b inhibitory synaptic factor family member 2B NW_004955408 22842645 22864156 - 102014421 AGCD01008581;GBDF01044092;XM_005376309;XR_001232379 XP_005376366 MODEL 8920217 ncrna LOC102003014 uncharacterized LOC102003014 NW_004955472 1903577 1923457 + 102003014 AGCD01053416;AGCD01053417;AGCD01053418;AGCD01053419;GBDF01013402;XR_001237086 MODEL 8977477 protein-coding LOC102007292 uncharacterized protein C15orf26-like NW_004956049 3925 6331 - 102007292 AGCD01078945;GBBH01031873;GBDJ01352435;XM_013510219 XP_013365673 MODEL 8739352 protein-coding Wapl WAPL cohesin release factor ENCODES a protein that exhibits ATP-dependent protein-DNA unloader activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromatin looping (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clubfoot (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955510 5596622 5674221 - 102007681 AGCD01066283;AGCD01066284;AGCD01066285;GBDI01171890;XM_005407895;XM_013506324 XP_005407952;XP_013361778 MODEL 8886057 ncrna LOC102025086 uncharacterized LOC102025086 NW_004955455 14383123 14393046 - 102025086 AGCD01046089;AGCD01046090;GBBH01162429;XR_262859 MODEL 8730876 protein-coding Cul4a cullin 4A ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955404 583261 617914 - 102014001 AGCD01003203;AGCD01003204;GBDK01143401;XM_013515570 XP_013371024 MODEL 10222039 protein-coding Ncr3 natural cytotoxicity triggering receptor 3 ENCODES a protein that exhibits identical protein binding (ortholog); immune receptor activity (ortholog); INVOLVED IN immune response-activating cell surface receptor signaling pathway (ortholog); natural killer cell activation (ortholog); NK T cell activation (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Chronic Hepatitis C (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 130360 134751 - 106149106 AGCD01034102;AGCD01034103;AGCD01034104;GBBH01150590;GBCE01101721;XM_013516929 XP_013372383 MODEL 8923705 protein-coding Pla2r1 phospholipase A2 receptor 1 ENCODES a protein that exhibits phospholipase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN oxidative stress-induced premature senescence (ortholog); positive regulation of arachidonate secretion (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955449 13542458 13653907 + 102028146 AGCD01042138;AGCD01042139;GBCE01188445;XM_005393355 XP_005393412 MODEL 10362905 ncrna LOC106150023 uncharacterized LOC106150023 NW_004955461 12937023 12973608 + 106150023 AGCD01049027;GBCE01106320;XR_001236547 MODEL 8963459 protein-coding Golga7 golgin A7 INVOLVED IN Golgi to plasma membrane protein transport (ortholog); Golgi to plasma membrane transport (ortholog); post-translational protein modification (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN Golgi membrane (ortholog); Golgi stack (ortholog); palmitoyltransferase complex (ortholog) NW_004955536 1386760 1408628 - 102014394 AGCD01070756;GBDF01082272;XM_005410528 XP_005410585 MODEL 10074625 ncrna LOC106147082 uncharacterized LOC106147082 NW_004955517 975901 994521 + 106147082 AGCD01067588;GBCE01037720;XR_001231812 MODEL 8743020 protein-coding Ddb1 damage specific DNA binding protein 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); damaged DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); cellular response to UV (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) NW_004955511 6209777 6233594 + 102017262 AGCD01066598;GBCQ01006346;XM_005408163 XP_005408220 MODEL 9040004 ncrna LOC102021315 uncharacterized LOC102021315 NW_004955408 24229582 24231940 - 102021315 AGCD01008604;GBDF01157222;XR_001232408;XR_001232409;XR_259709 MODEL 39132465 snrna U6 U6 spliceosomal RNA 9002121 trna Trnat-ugu transfer RNA threonine (anticodon UGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955530;NW_004955550;NW_004955431;NW_004955550;NW_004955550 130485;1411138;19443004;1499781;1425424 130557;1411210;19443075;1499853;1425496 +;-;+;+;- 101978812 AGCD01030449;AGCD01069830;AGCD01072566;AGCD01072577 MODEL 8728973 protein-coding Myom2 myomesin 2 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN extraocular skeletal muscle development (ortholog); sarcomere organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN M band (ortholog) NW_004955403 57718120 57783338 - 102013242 AGCD01003156;AGCD01003157;GBDI01074856;XM_005373853;XM_005373854;XM_013514994 XP_005373910;XP_005373911;XP_013370448 MODEL 8699530 pseudo LOC102003375 mortality factor 4-like protein 1 pseudogene NW_004955532 142317 143401 + 102003375 AGCD01070101 MODEL 9024744 protein-coding Golga7b golgin A7 family member B ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955507 3900093 3912175 + 102009088 AGCD01065639;GBCB01074511;XM_013506239;XM_013506240;XM_013506241;XM_013506242 XP_013361693;XP_013361694;XP_013361695;XP_013361696 MODEL 8989629 protein-coding Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955420 23184914 23194809 - 102023604 AGCD01021233;GBDK01003599;XM_005383335 XP_005383392 MODEL 39134456 misc_rna 7SK 7SK RNA 9032369 protein-coding LOC102010725 early placenta insulin-like peptide NW_004955434 9375953 9378354 - 102010725 AGCD01032299;GBDJ01223750;XM_005388747 XP_005388804 MODEL 8804901 ncrna LOC102008788 uncharacterized LOC102008788 NW_004955446 7907980 7940327 - 102008788 AGCD01040132;AGCD01040133;GBBH01101806;XR_001235659;XR_001235660;XR_001235661;XR_001235662;XR_001235663;XR_262390 MODEL 8932076 protein-coding Cryab crystallin alpha B ENCODES a protein that exhibits amyloid-beta binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process involved in morphogenesis (ortholog); camera-type eye development (ortholog); cellular response to gamma radiation (ortholog); ASSOCIATED WITH adult-onset myofibrillar myopathy 2A (ortholog); cardiomyopathy (ortholog); cataract (ortholog); FOUND IN actin filament bundle (ortholog); axon (ortholog); cardiac myofibril (ortholog) NW_004955412 13626018 13629495 - 102024777 AGCD01012843;GBBH01119901;XM_005378100 XP_005378157 MODEL 9066181 ncrna LOC102007630 uncharacterized LOC102007630 NW_004955457 12213711 12215439 + 102007630 AGCD01047004;GBCQ01183768;XR_262943 MODEL 8908797 protein-coding Nuak1 NUAK family kinase 1 ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); regulation of cell adhesion (ortholog); regulation of cellular senescence (ortholog); ASSOCIATED WITH COVID-19 (ortholog); multiple myeloma (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955405 40156316 40188144 - 102003938 AGCD01005505;GBCE01016816;GBDF01040523;XM_013519022 XP_013374476 MODEL 8849227 protein-coding Fgfr4 fibroblast growth factor receptor 4 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adult respiratory distress syndrome (ortholog); Brain Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955408 29370480 29383531 + 102019778 AGCD01008753;AGCD01008754;GBCQ01129403;XM_005376410;XM_005376412;XM_005376413;XM_005376414 XP_005376467;XP_005376469;XP_005376470;XP_005376471 MODEL 8992407 protein-coding Gjb6 gap junction protein beta 6 ENCODES a protein that exhibits actin filament binding (ortholog); beta-tubulin binding (ortholog); gap junction channel activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); ear morphogenesis (ortholog); gap junction assembly (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 3B (ortholog); autosomal recessive nonsyndromic deafness 1A (ortholog); autosomal recessive nonsyndromic deafness 1B (ortholog); FOUND IN actin filament (ortholog); apical plasma membrane (ortholog); cell junction (ortholog) NW_004955497 1018610 1027593 - 102009077 AGCD01062445;AGCD01062446;GBDF01280916;XM_005406302;XM_005406304;XM_005406305;XM_005406306 XP_005406359;XP_005406361;XP_005406362;XP_005406363 MODEL 8891365 ncrna LOC102009931 uncharacterized LOC102009931 NW_004955469 1231307 1236093 - 102009931 AGCD01052250;XR_263423 MODEL 9056968 protein-coding Mtnr1a melatonin receptor 1A ENCODES a protein that exhibits hormone binding (ortholog); melatonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); camera-type eye development (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); Huntington's disease (ortholog); FOUND IN neuronal cell body (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955403 22636212 22658566 + 102008174 AGCD01002227;AGCD01002228;XM_005373892 XP_005373949 MODEL 8869333 protein-coding LOC102005144 cytidine monophosphate-N-acetylneuraminic acid hydroxylase NW_004955483 1836388 2025256 + 102005144 AGCD01057655;AGCD01057656;AGCD01057657;AGCD01057658;AGCD01057659;AGCD01057660;AGCD01057661;AGCD01057662;AGCD01057663;AGCD01057664;AGCD01057665;AGCD01057666;GBCE01108999;XM_005403351;XM_005403352;XM_005403353;XM_013503835;XM_013503836;XM_013503837 XP_005403408;XP_005403409;XP_005403410;XP_013359289;XP_013359290;XP_013359291 MODEL 8957830 protein-coding LOC102006191 zinc finger protein 449-like NW_004955602 489329 501914 + 102006191 AGCD01076788;AGCD01076789;XM_013510075 XP_013365529 MODEL 8740841 pseudo LOC102005827 60S ribosomal protein L6-like NW_004955430 3987198 3988065 - 102005827 AGCD01029239;XR_261416 MODEL 8987948 protein-coding LOC102025087 zinc finger protein 709-like NW_004955407 43049470 43074123 - 102025087 AGCD01007903;AGCD01007904;GBDF01011131;XM_005375955;XM_013505817 XP_005376012;XP_013361271 MODEL 8777948 pseudo LOC102024396 coiled-coil domain-containing protein 152-like NW_004955575 268995 270575 + 102024396 AGCD01075210 MODEL 626189157 mirna MIR7-1 microRNA 7-1 8717861 ncrna LOC102012280 uncharacterized LOC102012280 NW_004955455 541374 542760 - 102012280 AGCD01045560;GBDF01021764;XR_262806 MODEL 8917460 pseudo LOC102013409 tubulin beta-4B chain pseudogene NW_004955415 32953159 32960953 + 102013409 AGCD01016743;AGCD01016744 MODEL 8790286 protein-coding Art4 ADP-ribosyltransferase 4 (inactive) (Dombrock blood group) ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955413 11569779 11586548 - 102030619 AGCD01013964;AGCD01013965;GBDI01055135;XM_005379011 XP_005379068 MODEL 8967272 ncrna LOC102004791 uncharacterized LOC102004791 NW_004955411 1297405 1299563 + 102004791 AGCD01011476;GBDF01076094;XR_001232844;XR_259909 MODEL 151707880 snorna SNORD89 small nucleolar RNA, C/D box 89 8865222 protein-coding LOC102021317 granzyme B-like NW_004955409 35631253 35633975 + 102021317 AGCD01010427;GBDJ01147919;XM_005376985 XP_005377042 MODEL 10065049 ncrna LOC106149234 uncharacterized LOC106149234 NW_004955441 4238542 4241612 + 106149234 AGCD01036837;GBCE01177931;XR_001235284 MODEL 8809302 protein-coding B3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); rheumatoid arthritis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955484 9462517 9467314 + 102016919 AGCD01058415;GBDI01255314;XM_005403702 XP_005403759 MODEL 39131667 rrna 5S_rRNA 5S ribosomal RNA 8797004 protein-coding Ints1 integrator complex subunit 1 INVOLVED IN blastocyst growth (ortholog); embryo implantation (ortholog); inner cell mass cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); brachydactyly (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nucleus (ortholog) NW_004955460 9116650 9149470 - 102020093 AGCD01048539;AGCD01048540;GBDI01084167;XM_013521197;XM_013521198;XM_013521199;XM_013521200;XM_013521201 XP_013376651;XP_013376652;XP_013376653;XP_013376654;XP_013376655 MODEL 8922769 protein-coding Psmd3 proteasome 26S subunit, non-ATPase 3 INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) NW_004955451 14666882 14685573 + 102007615 AGCD01043565;AGCD01043566;GBBH01033601;GBDF01005924;XM_005394339 XP_005394396 MODEL 8735041 protein-coding Hmces 5-hydroxymethylcytosine binding, ES cell specific ENCODES a protein that exhibits DNA-(abasic site) binding (ortholog); DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); protein-DNA covalent cross-linking activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); interstrand cross-link repair (ortholog); FOUND IN chromosome (ortholog); replication fork (ortholog) NW_004955429 13616647 13638657 + 102012225 AGCD01028758;AGCD01028759;GBCQ01010395;XM_005387000;XM_005387001;XM_013515378 XP_005387057;XP_005387058;XP_013370832 MODEL 8970043 ncrna LOC102007631 uncharacterized LOC102007631 NW_004955408 21175728 21206688 - 102007631 AGCD01008553;GBDF01153618;XR_001232359;XR_001232366;XR_259693;XR_259694;XR_259695 MODEL 8737485 protein-coding Wars1 tryptophanyl-tRNA synthetase 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); regulation of angiogenesis (ortholog); tryptophanyl-tRNA aminoacylation (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant distal hereditary motor neuronopathy 9 (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955438 21414878 21445417 - 102006711 AGCD01035542;AGCD01035543;AGCD01035544;GBCE01053817;XM_005390433;XM_005390434;XM_005390436;XM_013517225 XP_005390490;XP_005390491;XP_005390493;XP_013372679 MODEL 8979412 pseudo LOC102017959 olfactory receptor 6C3-like NW_004955458 2571769 2572702 + 102017959 AGCD01047237 MODEL 39132611 rrna 5S_rRNA 5S ribosomal RNA 9030663 protein-coding Cwh43 cell wall biogenesis 43 C-terminal homolog INVOLVED IN brain development (ortholog); cell adhesion (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Lung Neoplasms (ortholog) NW_004955447 18683173 18733546 - 102020393 AGCD01041183;AGCD01041184;GBDJ01334628;XM_005392926 XP_005392983 MODEL 9012750 protein-coding Serpina5 serpin family A member 5 ENCODES a protein that exhibits acrosin binding (ortholog); phosphatidylcholine binding (ortholog); protease binding (ortholog); INVOLVED IN negative regulation of proteolysis (ortholog); seminal clot liquefaction (ortholog); seminal vesicle development (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Arterial Occlusive Diseases (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal membrane (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) NW_004955438 17787398 17796013 - 102019959 AGCD01035451;GBDF01001290;XM_005390388 XP_005390445 MODEL 8751896 ncrna LOC102023015 uncharacterized LOC102023015 NW_004955465 3866841 3869578 + 102023015 AGCD01050394;GBDF01077342;XR_263234 MODEL 10328605 ncrna LOC106147083 uncharacterized LOC106147083 NW_004955517 2189871 2202540 + 106147083 AGCD01067619;GBDF01072356;XR_001231813;XR_001231814;XR_001231815;XR_001231816 MODEL 9018196 protein-coding Khk ketohexokinase ENCODES a protein that exhibits ATP binding (ortholog); fructose binding (ortholog); identical protein binding (ortholog); INVOLVED IN fructose catabolic process (ortholog); fructose metabolic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); carbohydrate metabolic disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955469 9058095 9071091 + 102019905 AGCD01052488;AGCD01052489;GBCB01043782;XM_005400453;XM_005400454;XM_005400455;XM_013522609;XM_013522610 XP_005400510;XP_005400511;XP_005400512;XP_013378063;XP_013378064 MODEL 39132466 snrna U6 U6 spliceosomal RNA 8964548 pseudo LOC102003378 S-phase kinase-associated protein 1 pseudogene NW_004955537 3218460 3219427 - 102003378 AGCD01070953 MODEL 39134145 misc_rna 7SK 7SK RNA 8708057 protein-coding LOC102022658 conserved oligomeric Golgi complex subunit 1-like NW_004955716 2740 4643 - 102022658 AGCD01078165;GBDJ01020819;XM_005415076 XP_005415133 MODEL 39134457 misc_rna 7SK 7SK RNA 8934066 pseudo LOC102010726 radixin pseudogene NW_004955435 6868094 6869629 - 102010726 AGCD01032938 MODEL 8918719 protein-coding LOC102003015 olfactory receptor 51G2-like NW_004955414 20898763 20899722 - 102003015 AGCD01015395;XM_005380485 XP_005380542 MODEL 9043707 ncrna LOC102007293 uncharacterized LOC102007293 NW_004955404 27234470 27303032 - 102007293 AGCD01003918;AGCD01003919;AGCD01003920;AGCD01003921;AGCD01003922;GBDF01074909;XR_259322 MODEL 8952085 protein-coding Nuak2 NUAK family kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to glucose starvation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Anencephaly 2 (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear speck (ortholog) NW_004955406 41050396 41069066 - 102007623 AGCD01006670;GBDK01236711;XM_005375354 XP_005375411 MODEL 8837721 pseudo LOC102023369 amyloid beta A4 precursor protein-binding family B member 2 pseudogene NW_004955490 780174 780721 - 102023369 AGCD01060088 MODEL 8922879 protein-coding LOC102011894 olfactory receptor 5AS1-like NW_004955511 949994 950932 + 102011894 AGCD01066346;XM_005408219 XP_005408276 MODEL 8939220 protein-coding Ddb2 damage specific DNA binding protein 2 ENCODES a protein that exhibits damaged DNA binding (ortholog); protein-containing complex binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); nucleotide-excision repair (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH genetic disease (ortholog); melanoma (ortholog); ovarian cancer (ortholog); FOUND IN chromosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955422 961602 977066 - 102028867 AGCD01022442;AGCD01022443;GBCQ01117857;XM_005383999;XM_013513922;XR_001233894;XR_001233895;XR_001233896 XP_005384056;XP_013369376 MODEL 8938520 protein-coding LOC102025089 olfactory receptor 9-like NW_004955458 3200530 3201468 - 102025089 AGCD01047278;XM_013520865 XP_013376319 MODEL 8796332 protein-coding Trnau1ap tRNA selenocysteine 1 associated protein 1 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 7645715 7663165 + 102017838 AGCD01044179;AGCD01044180;GBDF01189732;XM_005394958 XP_005395015 MODEL 39132613 rrna 5S_rRNA 5S ribosomal RNA 8759902 ncrna LOC102017963 uncharacterized LOC102017963 NW_004955463 4854737 4856857 - 102017963 AGCD01049619;GBCQ01156510;XR_263147 MODEL 10085659 protein-coding Bend5 BEN domain containing 5 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955464 9952128 9997938 + 106146240 AGCD01050118;GBDF01262049;XM_005398627;XM_013521736;XM_013521737 XP_005398684;XP_013377190;XP_013377191 MODEL 8937372 protein-coding Golgb1 golgin B1 INVOLVED IN chondrocyte proliferation (ortholog); protein localization to pericentriolar material (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955427 21022369 21108448 - 102004092 AGCD01027431;AGCD01027432;GBBH01089618;XM_005386495;XM_013515169;XM_013515170;XM_013515171;XM_013515172;XM_013515173;XM_013515174 XP_005386552;XP_013370623;XP_013370624;XP_013370625;XP_013370626;XP_013370627;XP_013370628 MODEL 8957178 pseudo LOC102008791 alpha-enolase pseudogene NW_004955447 16493351 16494703 + 102008791 AGCD01041088 MODEL 8996279 protein-coding B3gntl1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 ENCODES a protein that exhibits tRNA-queuosine(34) galactosyltransferase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA modification (ortholog); tRNA wobble guanine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955506 165383 272051 + 102003989 AGCD01065216;AGCD01065217;AGCD01065218;GBDF01248941;XM_005407178;XM_005407179;XM_013506005;XM_013506006 XP_005407235;XP_005407236;XP_013361459;XP_013361460 MODEL 8924004 protein-coding Ncs1 neuronal calcium sensor 1 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); protein kinase binding (ortholog); INVOLVED IN positive regulation of calcium-mediated signaling (ortholog); positive regulation of exocytosis (ortholog); regulation of neuron projection development (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN axon (ortholog); calyx of Held (ortholog); cytoplasm (ortholog) NW_004955513 268979 289385 + 102015336 AGCD01066819;AGCD01066820;GBCQ01068735;GBCQ01068739;XM_005408341 XP_005408398 MODEL 10320712 ncrna LOC106150024 uncharacterized LOC106150024 NW_004955461 8457281 8506691 - 106150024 AGCD01048928;AGCD01048929;XR_001236548;XR_001236549 MODEL 8746595 protein-coding Hdac10 histone deacetylase 10 ENCODES a protein that exhibits acetylputrescine deacetylase activity (ortholog); acetylspermidine deacetylase activity (ortholog); deacetylase activity (ortholog); INVOLVED IN homologous recombination (ortholog); macroautophagy (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); histone deacetylase complex (ortholog) NW_004955413 33272600 33277893 - 102024549 AGCD01014661;GBDJ01361594;XM_013511371;XM_013511372 XP_013366825;XP_013366826 MODEL 8975418 ncrna LOC102009935 uncharacterized LOC102009935 NW_004955471 831025 838931 - 102009935 AGCD01052965;GBDF01265719;XR_263511 MODEL 9026866 protein-coding Fgfrl1 fibroblast growth factor receptor like 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); diaphragm development (ortholog); heart valve morphogenesis (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cell-cell contact zone (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955514 499526 509208 + 102011793 AGCD01067013;GBCB01073055;XM_005408687 XP_005408744 MODEL 8913825 protein-coding Cul4b cullin 4B ENCODES a protein that exhibits damaged DNA binding (ortholog); ubiquitin ligase complex scaffold activity (ortholog); INVOLVED IN astrocyte differentiation (ortholog); gene expression (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); allergic contact dermatitis (ortholog); amblyopia (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) NW_004955572 1308491 1365147 + 102003816 AGCD01074949;GBDF01160515;XM_005413656;XM_005413657;XM_005413658;XM_005413659;XM_013509444 XP_005413713;XP_005413714;XP_005413715;XP_005413716;XP_013364898 MODEL 8915950 protein-coding LOC102005146 olfactory receptor 13C8-like NW_004955419 21810593 21816934 - 102005146 AGCD01020283;AGCD01020284;XM_005382788 XP_005382845 MODEL 9055972 protein-coding Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) NW_004955588 607763 618040 + 102028482 AGCD01076117;GBDF01043329;XM_005414507;XM_005414508 XP_005414564;XP_005414565 MODEL 9016002 ncrna LOC102005831 uncharacterized LOC102005831 NW_004955514 2457669 2462790 + 102005831 AGCD01067082;GBDF01145712;XR_264496 MODEL 8780673 protein-coding LOC102006193 PRAME family member 22-like NW_004955615 261822 264278 + 102006193 AGCD01077252;XM_013510140 XP_013365594 MODEL 8733606 protein-coding Hmcn1 hemicentin 1 INVOLVED IN actin cytoskeleton organization (ortholog); basement membrane organization (ortholog); response to bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); age related macular degeneration 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN anchoring junction (ortholog); basement membrane (ortholog); cell cortex (ortholog) NW_004955406 24229666 24623341 + 102011399 AGCD01006193;AGCD01006194;AGCD01006195;AGCD01006196;AGCD01006197;AGCD01006198;AGCD01006199;AGCD01006200;AGCD01006201;AGCD01006202;GBDJ01303573;XM_005375081;XM_013521738;XM_013521742 XP_005375138;XP_013377192;XP_013377196 MODEL 9018750 ncrna LOC102011899 uncharacterized LOC102011899 NW_004955517 51555 54459 - 102011899 AGCD01067565;GBDK01097081;XR_264538 MODEL 9047565 protein-coding Myom3 myomesin 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN M band (ortholog) NW_004955452 3925373 3968721 - 102015477 AGCD01043960;AGCD01043961;GBCB01057863;XM_013519683 XP_013375137 MODEL 39133694 mirna MIR7-3 microRNA 7-3 8859452 pseudo LOC102013413 peptidyl-prolyl cis-trans isomerase-like 4 pseudogene NW_004955417 10686148 10688391 + 102013413 AGCD01018086 MODEL 8810179 ncrna LOC102025091 uncharacterized LOC102025091 NW_004955409 24554548 24560508 + 102025091 AGCD01010087;GBDF01074865;XR_001232659;XR_259792 MODEL 8898464 ncrna LOC102021318 uncharacterized LOC102021318 NW_004955410 18989630 19019952 + 102021318 AGCD01011016;GBCB01067072;XR_259849 MODEL 8831700 protein-coding Khnyn KH and NYN domain containing ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955409 35871214 35880233 - 102025660 AGCD01010435;GBBH01092218;XM_005376998;XM_005376999;XR_001232667 XP_005377055;XP_005377056 MODEL 39131668 rrna 5S_rRNA 5S ribosomal RNA 10151702 ncrna LOC106149235 uncharacterized LOC106149235 NW_004955441 13547103 13570486 - 106149235 AGCD01037154;GBBH01196398;XR_001235285;XR_001235286 MODEL 8777568 protein-coding Fam194c family with sequence similarity 149 member C ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955429 17222834 17271320 + 102007256 AGCD01028848;AGCD01028849;GBDF01002418;XM_005387068;XM_005387069;XM_005387071 XP_005387125;XP_005387126;XP_005387128 MODEL 8960874 protein-coding Ints10 integrator complex subunit 10 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nucleus (ortholog) NW_004955403 43519239 43546209 + 102022036 AGCD01002773;GBDF01049941;XM_005373620;XM_005373621;XM_005373622;XM_005373623;XM_013513619;XM_013513628 XP_005373677;XP_005373678;XP_005373679;XP_005373680;XP_013369073;XP_013369082 MODEL 8985118 protein-coding Plaa phospholipase A2 activating protein ENCODES a protein that exhibits phospholipase A2 activator activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); inflammatory response (ortholog); macroautophagy (ortholog); ASSOCIATED WITH B-cell lymphoma (ortholog); bicuspid aortic valve disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ATPase complex (ortholog); cytoplasm (ortholog); cytoplasmic ubiquitin ligase complex (ortholog) NW_004955472 7879196 7915040 + 102027635 AGCD01053633;AGCD01053634;AGCD01053635;GBCE01084855;XM_005401157 XP_005401214 MODEL 8717435 protein-coding G2e3 G2/M-phase specific E3 ubiquitin protein ligase ENCODES a protein that exhibits histone H3K14 ubiquitin ligase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN blastocyst development (ortholog); heterochromatin formation (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); pericentric heterochromatin (ortholog) NW_004955409 29908075 29965331 - 102016897 AGCD01010283;GBDJ01348371;XM_013510386 XP_013365840 MODEL 8914499 protein-coding Bend6 BEN domain containing 6 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955502 3123024 3152121 - 102027550 AGCD01064310;GBDF01305622;XM_005406887 XP_005406944 MODEL 8864745 pseudo LOC102007638 allograft inflammatory factor 1 pseudogene NW_004955464 13479825 13484167 - 102007638 AGCD01050284;AGCD01050285 MODEL 9053487 protein-coding Wars2 tryptophanyl tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits tryptophan-tRNA ligase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); vasculogenesis (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); hyperinsulinemic hypoglycemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955435 22032230 22115138 - 102014082 AGCD01033489;AGCD01033490;AGCD01033491;GBCB01110388;XM_005389073;XM_005389075 XP_005389130;XP_005389132 MODEL 8901899 protein-coding Serpina6 serpin family A member 6 ENCODES a protein that exhibits molecular carrier activity (ortholog); steroid binding (ortholog); INVOLVED IN glucocorticoid metabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); clear cell renal cell carcinoma (ortholog); corticosteroid-binding globulin deficiency (ortholog); FOUND IN extracellular region (ortholog) NW_004955438 16356600 16380861 - 102014492 AGCD01035406;AGCD01035407;AGCD01035408;XM_013517149 XP_013372603 MODEL 10214953 ncrna LOC106147084 uncharacterized LOC106147084 NW_004955402 10998277 11036252 + 106147084 AGCD01000295;XR_001231833 MODEL 8985858 protein-coding Psmd5 proteasome 26S subunit, non-ATPase 5 INVOLVED IN proteasome regulatory particle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome regulatory particle, base subcomplex (ortholog) NW_004955419 7199549 7221431 + 102025008 AGCD01019875;GBBH01025438;XM_005382593 XP_005382650 MODEL 8859831 protein-coding Ddc dopa decarboxylase ENCODES a protein that exhibits 5-hydroxy-L-tryptophan decarboxylase activity (ortholog); amino acid binding (ortholog); aromatic-L-amino-acid decarboxylase activity (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); cellular response to alkaloid (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); aromatic L-amino acid decarboxylase deficiency (ortholog); astigmatism (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955456 3513779 3582851 + 102027270 AGCD01046276;GBCQ01100816;XM_005396601;XM_005396602;XM_005396603;XM_005396605;XM_013520640 XP_005396658;XP_005396659;XP_005396660;XP_005396662;XP_013376094 MODEL 8754672 trna Trnav-aac transfer RNA valine (anticodon AAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978798 AGCD01020530;AGCD01050590;AGCD01050597;AGCD01050600;AGCD01057602;AGCD01069830;AGCD01071614 MODEL 8858498 protein-coding Art5 ADP-ribosyltransferase 5 ENCODES a protein that exhibits NAD+ nucleosidase activity (ortholog); NAD+-protein-arginine ADP-ribosyltransferase activity (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955414 19460652 19464771 - 102007218 AGCD01081640;GBDJ01335349;XM_005380023 XP_005380080 MODEL 8713666 protein-coding Gjb7 gap junction protein beta 7 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN transmembrane transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955411 14285142 14303036 - 102024320 AGCD01011913;AGCD01011914;GBBH01089738;XM_005377716;XM_005377717;XM_005377718 XP_005377773;XP_005377774;XP_005377775 MODEL 9031971 protein-coding LOC102022660 cilia- and flagella-associated protein 43-like NW_004955896 7887 11670 - 102022660 AGCD01078608;GBBH01035019;XM_013510203 XP_013365657 MODEL 8820537 protein-coding LOC102017970 zinc finger protein 624 NW_004955467 1957286 2017814 - 102017970 AGCD01051298;AGCD01051299;GBDI01212656;XM_005399322 XP_005399379 MODEL 39132620 rrna 5S_rRNA 5S ribosomal RNA 8789659 protein-coding Myorg myogenesis regulating glycosidase ENCODES a protein that exhibits alpha-galactosidase activity (ortholog); INVOLVED IN positive regulation of insulin-like growth factor receptor signaling pathway (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); skeletal muscle fiber development (ortholog); ASSOCIATED WITH basal ganglia calcification (ortholog); Deglutition Disorders (ortholog); Dysarthria (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) NW_004955472 1735292 1740304 + 102030186 AGCD01053411;GBCB01020181;XM_005401081 XP_005401138 MODEL 8752239 protein-coding Mtnr1b melatonin receptor 1B ENCODES a protein that exhibits melatonin receptor activity (ortholog); INVOLVED IN camera-type eye development (ortholog); glucose homeostasis (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); autism spectrum disorder (ortholog); polycystic ovary syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955414 1394709 1406990 - 102006023 AGCD01014768;XM_005380432 XP_005380489 MODEL 8920297 pseudo LOC102007294 serine/threonine/tyrosine-interacting protein pseudogene NW_004955453 2624180 2624993 + 102007294 AGCD01044634 MODEL 39131669 rrna 5S_rRNA 5S ribosomal RNA 8837138 ncrna LOC102024398 uncharacterized LOC102024398 NW_004955448 8864773 8881822 + 102024398 AGCD01041452;GBDF01303232;XR_262466 MODEL 8961290 protein-coding LOC102013416 butyrophilin subfamily 2 member A2 NW_004955483 413795 498359 - 102013416 AGCD01057609;AGCD01057610;AGCD01057611;AGCD01057612;AGCD01057613;AGCD01057614;AGCD01057615;AGCD01057616;AGCD01057617;AGCD01057618;AGCD01057619;GBDJ01002979;XM_005403285;XM_013503774;XM_013503775;XM_013503776;XM_013503777;XM_013503779;XM_013503780;XM_013503781 XP_005403342;XP_013359228;XP_013359229;XP_013359230;XP_013359231;XP_013359233;XP_013359234;XP_013359235 MODEL 8972755 pseudo LOC102023374 glutamate dehydrogenase 1, mitochondrial-like NW_004955423 16916856 16946608 + 102023374 AGCD01023843;XR_260975 MODEL 8928607 protein-coding Nub1 negative regulator of ubiquitin like proteins 1 INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); proteasomal protein catabolic process (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Lewy body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955491 5709791 5737620 + 102008738 AGCD01060499;GBDF01010397;XM_005404832 XP_005404889 MODEL 8946988 ncrna LOC102012281 uncharacterized LOC102012281 NW_004955456 10060816 10063097 + 102012281 AGCD01046517;GBDF01293625;XR_262891 MODEL 8776301 pseudo LOC102009936 probable RNA-binding protein 46 pseudogene NW_004955414 12245219 12246350 - 102009936 AGCD01015095 MODEL 8709063 protein-coding Hdac11 histone deacetylase 11 ENCODES a protein that exhibits histone deacetylase activity, hydrolytic mechanism (ortholog); INVOLVED IN oligodendrocyte development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955429 12890939 12907749 - 102005736 AGCD01028733;GBBH01209100;XM_005386979;XM_005386981 XP_005387036;XP_005387038 MODEL 8719739 protein-coding LOC102005152 olfactory receptor 2A2-like NW_004955491 447741 450169 + 102005152 AGCD01060335;XM_005404725 XP_005404782 MODEL 8750184 protein-coding LOC102004794 olfactory receptor 8G1-like NW_004955412 25040599 25044790 + 102004794 AGCD01013133;XM_005378413;XM_013511248 XP_005378470;XP_013366702 MODEL 8787664 ncrna LOC102006194 uncharacterized LOC102006194 NW_004956032 1817 5572 + 102006194 AGCD01078914;GBBH01223549;XR_265202 MODEL 8712034 protein-coding Cul5 cullin 5 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cell migration (ortholog); cerebral cortex radially oriented cell migration (ortholog); negative regulation of focal adhesion assembly (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); Breast Neoplasms (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955412 10266072 10336156 + 102014031 AGCD01012764;AGCD01012765;AGCD01012766;GBDF01053200;XM_013510972 XP_013366426 MODEL 150537135 snorna SNORD9 small nucleolar RNA, C/D box 9 8952183 pseudo LOC102011905 dnaJ homolog subfamily A member 1 pseudogene NW_004955526 2793294 2822895 + 102011905 AGCD01069321 MODEL 9023936 ncrna LOC102003383 uncharacterized LOC102003383 NW_004955440 16475861 16478883 - 102003383 AGCD01036518;GBDF01286061;XR_262033 MODEL 39134458 misc_rna 7SK 7SK RNA 8798537 protein-coding Golim4 golgi integral membrane protein 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955448 17214536 17288003 - 102012816 AGCD01041717;GBCQ01069721;XM_005393143;XM_013518629 XP_005393200;XP_013374083 MODEL 8814674 pseudo LOC102025093 zinc finger protein 23-like NW_004955460 9964512 9970986 - 102025093 AGCD01048565 MODEL 8950651 pseudo LOC102008792 F-box/LRR-repeat protein 20 pseudogene NW_004955447 14849540 14851022 - 102008792 AGCD01041022 MODEL 8929280 protein-coding LOC102010731 gap junction epsilon-1 protein NW_004955436 18085611 18087433 - 102010731 AGCD01033955;XM_005389256 XP_005389313 MODEL 8906889 protein-coding Khsrp KH-type splicing regulatory protein ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to cytokine stimulus (ortholog); miRNA metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasmic stress granule (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955495 3183083 3194356 + 102005058 AGCD01061833;AGCD01061834;AGCD01061835;GBBH01090066;GBCE01075167;XM_013505308 XP_013360762 MODEL 8829011 protein-coding Psmd6 proteasome 26S subunit, non-ATPase 6 ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); Crohn's disease (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) NW_004955517 1874874 1886480 + 102017692 AGCD01067609;AGCD01067610;GBDF01002254;XM_005409021 XP_005409078 MODEL 8854285 protein-coding Fam199x family with sequence similarity 199, X-linked ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955548 1017047 1046580 + 102004011 AGCD01072353;AGCD01072354;AGCD01072355;GBDF01235220;XM_005412008;XM_013508529 XP_005412065;XP_013363983 MODEL 9026843 protein-coding Plaat1 phospholipase A and acyltransferase 1 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); peroxisome organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope lumen (ortholog); nucleus (ortholog) NW_004955420 15305901 15326444 - 102008629 AGCD01020968;GBBH01131778;XM_005383210;XM_005383211 XP_005383267;XP_005383268 MODEL 8718124 protein-coding Cx3cl1 C-X3-C motif chemokine ligand 1 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CX3C chemokine receptor binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); autocrine signaling (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); allergic disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) NW_004955433 15023272 15034650 + 102025717 AGCD01031744;AGCD01031745;GBBH01091020;XM_005388386;XM_005388387 XP_005388443;XP_005388444 MODEL 8937841 protein-coding Ints11 integrator complex subunit 11 ENCODES a protein that exhibits RNA endonuclease activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA 3'-end processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) NW_004955486 9479057 9491629 + 102026531 AGCD01059188;GBBH01141476;XM_005404242 XP_005404299 MODEL 8751901 protein-coding LOC102023016 olfactory receptor 148-like NW_004955412 24774653 24775579 + 102023016 AGCD01013125;XM_005378636 XP_005378693 MODEL 8767652 ncrna LOC102005832 uncharacterized LOC102005832 NW_004955432 9508053 9514240 + 102005832 AGCD01030907;GBDF01055577;XR_261519 MODEL 39132468 snrna U6 U6 spliceosomal RNA 9035538 protein-coding Hmcn2 hemicentin 2 FOUND IN basement membrane (ortholog); cell cortex (ortholog); cell junction (ortholog) NW_004955513 303490 434207 + 102020942 AGCD01066820;AGCD01066821;AGCD01066822;AGCD01066823;AGCD01066824;AGCD01066825;GBCB01036967;GBCB01074728;XM_013506721 XP_013362175 MODEL 39134146 misc_rna 7SK 7SK RNA 151707894 mirna MIR708 microRNA 708 8983370 protein-coding Was WASP actin nucleation promoting factor ENCODES a protein that exhibits identical protein binding (ortholog); phospholipase binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin filament-based movement (ortholog); actin polymerization or depolymerization (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog); disease by infectious agent (ortholog); Ecchymosis (ortholog); FOUND IN actin filament (ortholog); cell-cell junction (ortholog); cytosol (ortholog) NW_004955543 243618 253489 + 102022858 AGCD01071569;GBBH01116435;XM_005411273 XP_005411330 MODEL 8726600 protein-coding Serpina7 serpin family A member 7 ENCODES a protein that exhibits hormone binding (ortholog); INVOLVED IN post-embryonic development (ortholog); response to corticosterone (ortholog); response to nutrient levels (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); diabetes mellitus (ortholog); FOUND IN extracellular region (ortholog) NW_004955548 2855377 2861946 - 102006287 AGCD01072411;GBDF01025901;XM_005412013 XP_005412070 MODEL 8987813 pseudo LOC102021323 BTB/POZ domain-containing protein KCTD2-like NW_004955464 12405610 12412983 - 102021323 AGCD01050195;AGCD01050196 MODEL 8843723 protein-coding Artn artemin ENCODES a protein that exhibits growth factor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); induction of positive chemotaxis (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); Animal Disease Models (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955537 3460176 3464335 + 102007592 AGCD01070959;GBCE01108535;XM_005410688;XM_013507753;XM_013507754;XM_013507755;XM_013507756 XP_005410745;XP_013363207;XP_013363208;XP_013363209;XP_013363210 MODEL 8838344 protein-coding Ncstn nicastrin ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); ATPase binding (ortholog); endopeptidase activator activity (ortholog); INVOLVED IN adult behavior (ortholog); amyloid precursor protein biosynthetic process (ortholog); amyloid precursor protein catabolic process (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955468 12111078 12126404 + 102017324 AGCD01052143;AGCD01052144;GBDF01046063;XM_005400205 XP_005400262 MODEL 8883302 protein-coding LOC102022662 defensin-5-like NW_004955403 53801771 53803475 + 102022662 AGCD01003074;GBDF01286772;XM_005373914 XP_005373971 MODEL 10172533 ncrna LOC106149236 uncharacterized LOC106149236 NW_004955441 14795883 14798941 - 106149236 AGCD01037222;GBDK01344176;XR_001235287;XR_001235288 MODEL 39131670 rrna 5S_rRNA 5S ribosomal RNA 8967317 pseudo LOC102007297 stromal membrane-associated protein 1 pseudogene NW_004955454 15354912 15356393 + 102007297 AGCD01045493 MODEL 9032212 protein-coding LOC102007642 skin secretory protein xP2-like NW_004955467 8730837 8734563 + 102007642 AGCD01051466;AGCD01051467;GBDF01044983;XM_005399752 XP_005399809 MODEL 8740878 protein-coding Fgg fibrinogen gamma chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH brain small vessel disease (ortholog); clear cell renal cell carcinoma (ortholog); congenital afibrinogenemia (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8786910 8794947 + 102008306 AGCD01053194;GBDF01040042;XM_005400931 XP_005400988 MODEL 8781200 ncrna LOC102005154 uncharacterized LOC102005154 NW_004955493 5108829 5118871 - 102005154 AGCD01061059;GBDF01187998;XR_264083 MODEL 9006287 protein-coding Cryba1 crystallin beta A1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); lens development in camera-type eye (ortholog); negative regulation of cytokine production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); age related macular degeneration 1 (ortholog); cataract (ortholog) NW_004955481 3952976 3986548 - 102011868 AGCD01056924;AGCD01056925;AGCD01056926;GBDJ01396530;XM_013503466 XP_013358920 MODEL 8814304 ncrna LOC102009937 uncharacterized LOC102009937 NW_004955415 6291304 6307243 - 102009937 AGCD01016013;AGCD01016014;GBBH01127465;XR_001233263 MODEL 8896208 trna Trnav-cac transfer RNA valine (anticodon CAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978801 AGCD01050589;AGCD01052199;AGCD01057606;AGCD01061910;AGCD01069830;AGCD01076044;AGCD01080385 MODEL 8743367 protein-coding LOC102003016 uncharacterized LOC102003016 NW_004955415 11944706 11993056 - 102003016 AGCD01016181;AGCD01016182;GBDF01221008;XM_013512125 XP_013367579 MODEL 39131707 snorna SNORD90 small nucleolar RNA, C/D box 90 8699552 pseudo LOC102004795 zinc finger CCCH domain-containing protein 14-like NW_004955466 12129671 12131134 - 102004795 AGCD01051113 MODEL 8881870 protein-coding Nubp1 NUBP iron-sulfur cluster assembly factor 1, cytosolic ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); iron-sulfur cluster binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN centrosome localization (ortholog); intracellular iron ion homeostasis (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); iron-sulfur cluster assembly complex (ortholog) NW_004955442 7717422 7732496 - 102007706 AGCD01037628;GBDK01193633;XM_005391184;XM_005391186 XP_005391241;XP_005391243 MODEL 8905107 pseudo LOC102011909 ATP synthase F(0) complex subunit C2, mitochondrial pseudogene NW_004955538 2556303 2557233 + 102011909 AGCD01071128 MODEL 39132621 rrna 5S_rRNA 5S ribosomal RNA 8774454 protein-coding B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 ENCODES a protein that exhibits (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity (ortholog); acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); ganglioside biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955458 5351924 5361755 - 102008382 AGCD01047480;AGCD01047481;AGCD01047482;AGCD01047483;GBBH01001973;GBDI01009436;XM_005397405 XP_005397462 MODEL 10231865 protein-coding LOC106150025 translation initiation factor IF-2-like NW_004955461 8035952 8076473 + 106150025 AGCD01048925;GBCB01018848;XM_013521304 XP_013376758 MODEL 8806768 protein-coding Myot myotilin ENCODES a protein that exhibits alpha-actinin binding (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN Z disc (ortholog) NW_004955408 32816133 32835230 + 102017957 AGCD01008856;GBCB01002649;XM_005376507;XM_005376508 XP_005376564;XP_005376565 MODEL 8721472 protein-coding LOC102024400 olfactory receptor 15-like NW_004955581 637852 638793 - 102024400 AGCD01075684;XM_013509726 XP_013365180 MODEL 9011391 protein-coding Mto1 mitochondrial tRNA translation optimization 1 ENCODES a protein that exhibits tRNA 5-taurinomethyluridine synthase activity (ortholog); INVOLVED IN mitochondrial tRNA wobble uridine modification (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brain disease (ortholog); combined oxidative phosphorylation deficiency (ortholog); FOUND IN GTPBP3-MTO1 complex (ortholog); mitochondrion (ortholog) NW_004955493 8636093 8655090 + 102022397 AGCD01061321;AGCD01061322;AGCD01061323;AGCD01061324;GBCB01003826;GBDF01195472;XM_013504875 XP_013360329 MODEL 8870715 protein-coding G3bp1 G3BP stress granule assembly factor 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); DNA/RNA helicase activity (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of stress granule assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955408 6197988 6223135 + 102024091 AGCD01008166;GBCB01004131;XM_005376172 XP_005376229 MODEL 8887140 protein-coding LOC102013418 actin-like NW_004955420 22322153 22323606 - 102013418 AGCD01021196;GBCQ01147818;XM_013513570 XP_013369024 MODEL 9049996 protein-coding Wasf1 WASP family member 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog); mitochondrial outer membrane (ortholog) NW_004955411 34893287 34966670 - 102022176 AGCD01012417;AGCD01012418;GBDF01123264;XM_005377883;XM_005377884;XM_013510825 XP_005377940;XP_005377941;XP_013366279 MODEL 8913123 protein-coding Plaat5 phospholipase A and acyltransferase 5 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN N-acylphosphatidylethanolamine metabolic process (ortholog) NW_004955599 217365 247914 - 102029811 AGCD01076631;AGCD01076632;AGCD01076633;AGCD01076634;AGCD01076635;AGCD01076636;GBDF01006273;XM_005414748;XM_005414749 XP_005414805;XP_005414806 MODEL 8785343 protein-coding LOC102023020 sodium-dependent multivitamin transporter-like NW_004955469 9131732 9133911 - 102023020 AGCD01052491;AGCD01052492;GBCQ01139319;XM_005400465;XM_005400466 XP_005400522;XP_005400523 MODEL 8882482 protein-coding Hdac2 histone deacetylase 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); deacetylase activity (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cardiac muscle cell development (ortholog); cardiac muscle hypertrophy (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955526 2739099 2759640 + 102005296 AGCD01069313;GBCB01025957;XM_005409764 XP_005409821 MODEL 8947428 protein-coding LOC102007648 olfactory receptor 52B6 NW_004955414 21480839 21485708 + 102007648 AGCD01015421;XM_005380092 XP_005380149 MODEL 39134147 misc_rna 7SK 7SK RNA 8998560 protein-coding LOC102003389 vomeronasal type-1 receptor 1-like NW_004955558 668713 669606 + 102003389 AGCD01073385;XM_005412740 XP_005412797 MODEL 8884795 protein-coding Gjc1 gap junction protein gamma 1 ENCODES a protein that exhibits gap junction channel activity (ortholog); gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN AV node cell to bundle of His cell communication by electrical coupling (ortholog); cardiac muscle tissue development (ortholog); cell development (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH hypertension (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN connexin complex (ortholog); gap junction (ortholog); plasma membrane (ortholog) NW_004955451 17626859 17639002 - 102017942 AGCD01043764;GBDI01310484;XM_005394541;XM_005394542 XP_005394598;XP_005394599 MODEL 15036841 trna Trnav-gac transfer RNA valine (anticodon GAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978799 8895412 protein-coding Bend7 BEN domain containing 7 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog) NW_004955429 20674390 20756760 + 102010079 AGCD01028988;AGCD01028989;AGCD01028990;GBCE01135033;GBDK01082325;XM_005387164 XP_005387221 MODEL 8780450 protein-coding Golm1 golgi membrane protein 1 INVOLVED IN nucleus organization (ortholog); regulation of lipid metabolic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955432 1434759 1497916 + 102025495 AGCD01030595;AGCD01030596;AGCD01030597;GBDF01081794;XM_005387922;XM_013515954;XM_013515955;XM_013515956;XM_013515957;XM_013515958;XM_013515959;XM_013515960 XP_005387979;XP_013371408;XP_013371409;XP_013371410;XP_013371411;XP_013371412;XP_013371413;XP_013371414 MODEL 8971411 protein-coding ND1 NADH dehydrogenase subunit 1 MT 2722 3679 + 15822218 JX312692 AFQ55777;YP_008080745 REVIEWED 9030184 pseudo LOC102022663 synaptosomal-associated protein 23 pseudogene NW_004955451 15393866 15394819 - 102022663 AGCD01043606 MODEL 10086815 protein-coding Kiaa0040 KIAA0040 ortholog ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955406 14960837 14961459 - 106149968 AGCD01005975;GBDF01021546;XM_013520951 XP_013376405 MODEL 39131671 rrna 5S_rRNA 5S ribosomal RNA 8873090 protein-coding Psmd7 proteasome 26S subunit, non-ATPase 7 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955484 6824467 6832251 + 102021244 AGCD01058294;GBDF01003955;XM_005403534 XP_005403591 MODEL 10301986 ncrna LOC106147085 uncharacterized LOC106147085 NW_004955517 1045333 1049530 + 106147085 AGCD01067588;GBCE01129533;XR_001231820 MODEL 8935649 protein-coding LOC102006195 geranylgeranyl transferase type-2 subunit alpha-like NW_004957120 9 1764 + 102006195 AGCD01080516;GBBH01089051;GBCE01054026;XM_005415225 XP_005415282 MODEL 8782764 protein-coding LOC102007299 keratin-associated protein 20-2-like NW_004955407 30163388 30163546 + 102007299 AGCD01007628;XM_005375641 XP_005375698 MODEL 8783087 protein-coding Cx3cr1 C-X3-C motif chemokine receptor 1 ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); C-X3-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); autocrine signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); age related macular degeneration 12 (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell surface (ortholog); dendritic tree (ortholog); neuronal cell body membrane (ortholog) NW_004955427 24691206 24705599 + 102024484 AGCD01027517;GBCE01117768;XM_005386557 XP_005386614 MODEL 9055693 protein-coding LOC102012282 uroplakin-3b-like protein NW_004955456 15093798 15098628 + 102012282 AGCD01046662;GBDJ01177525;XM_005396824;XM_013520654 XP_005396881;XP_013376108 MODEL 8908894 protein-coding Ints12 integrator complex subunit 12 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nuclear body (ortholog) NW_004955496 3564548 3580178 + 102008746 AGCD01062296;GBDF01052169;XM_005406221 XP_005406278 MODEL 8887647 protein-coding Cul7 cullin 7 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); Golgi organization (ortholog); microtubule cytoskeleton organization (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH 3-M syndrome (ortholog); acute myeloid leukemia (ortholog); atrioventricular septal defect (ortholog); FOUND IN 3M complex (ortholog); centrosome (ortholog); Cul7-RING ubiquitin ligase complex (ortholog) NW_004955437 9003482 9018260 - 102030667 AGCD01034512;AGCD01034513;GBBH01088710;XM_005389748;XM_013516962;XM_013516963 XP_005389805;XP_013372416;XP_013372417 MODEL 8926776 protein-coding Fggy FGGY carbohydrate kinase domain containing ENCODES a protein that exhibits D-ribulokinase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); neuron cellular homeostasis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955464 188037 683230 - 102013064 AGCD01049928;AGCD01049929;AGCD01049930;AGCD01049931;AGCD01049932;AGCD01049933;AGCD01049934;AGCD01049935;AGCD01049936;AGCD01049937;AGCD01049938;AGCD01049939;AGCD01049940;AGCD01049941;GBBH01150983;XM_005398479;XM_005398481;XM_013521724;XM_013521725;XM_013521726;XM_013521727;XM_013521728;XM_013521729;XM_013521730;XM_013521731 XP_005398536;XP_005398538;XP_013377178;XP_013377179;XP_013377180;XP_013377181;XP_013377182;XP_013377183;XP_013377184;XP_013377185 MODEL 8888258 pseudo LOC102017979 NAD-dependent malic enzyme, mitochondrial pseudogene NW_004955475 5686616 5688181 + 102017979 AGCD01054925 MODEL 39134459 misc_rna 7SK 7SK RNA 150537122 mirna MIR744 microRNA 744 9047822 ncrna LOC102023021 uncharacterized LOC102023021 NW_004955470 8330094 8336006 - 102023021 AGCD01052826;GBDF01041373;XR_263477 MODEL 8773901 protein-coding LOC102008793 collagen alpha-2(I) chain NW_004955580 161170 172197 - 102008793 AGCD01075587;AGCD01075588;AGCD01075589;GBDF01080395;XM_005414114 XP_005414171 MODEL 9010871 pseudo LOC102007650 zinc finger and BTB domain-containing protein 14-like NW_004955470 12771610 12776657 - 102007650 AGCD01052939;AGCD01052940 MODEL 8784604 pseudo LOC102021324 60S ribosomal protein L23a pseudogene NW_004955411 28661333 28675617 + 102021324 AGCD01012223;AGCD01012224;AGCD01012225 MODEL 8877441 protein-coding Serpina9 serpin family A member 9 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955438 17862064 17875490 + 102020957 AGCD01035456;XM_013517148 XP_013372602 MODEL 9004575 ncrna LOC102010733 uncharacterized LOC102010733 NW_004955437 20621891 20626279 + 102010733 AGCD01034877;GBCB01027078;XR_261898 MODEL 39132629 rrna 5S_rRNA 5S ribosomal RNA 8959293 protein-coding Arv1 ARV1 fatty acid homeostasis modulator ENCODES a protein that exhibits sterol transfer activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid metabolic process (ortholog); cholesterol biosynthetic process (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria type 7b (ortholog); brain disease (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955492 7669956 7683293 - 102011325 AGCD01060802;GBDK01360217;XM_005404986;XM_005404987 XP_005405043;XP_005405044 MODEL 8855913 ncrna LOC102005833 uncharacterized LOC102005833 NW_004955516 4052159 4191251 + 102005833 AGCD01067516;AGCD01067517;AGCD01067518;AGCD01067519;GBBH01058464;XR_264537 MODEL 8892583 protein-coding LOC102025094 ubiquitin carboxyl-terminal hydrolase 42 NW_004955460 13645785 13690072 - 102025094 AGCD01048713;AGCD01048714;AGCD01048715;AGCD01048716;AGCD01048717;AGCD01048718;GBDI01136910;GBDJ01280509;XM_013521210 XP_013376664 MODEL 8978419 protein-coding Mtor mechanistic target of rapamycin kinase ENCODES a protein that exhibits identical protein binding (ortholog); inositol hexakisphosphate binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); behavioral response to pain (ortholog); cardiac cell development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-4 signaling pathway; mTOR signaling pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); acute kidney failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955486 2487642 2599694 + 102011321 AGCD01058998;AGCD01058999;GBDF01047787;XM_005404004 XP_005404061 MODEL 8736728 protein-coding LOC102009952 uncharacterized LOC102009952 NW_004955420 29396157 29403592 - 102009952 AGCD01021499;AGCD01021500;GBCE01185548;XM_013513408;XR_001233705;XR_001233706;XR_001233707;XR_260774;XR_260775 XP_013368862 MODEL 151707878 snorna SNORD92 small nucleolar RNA, C/D box 92 8964151 pseudo LOC102011910 WD repeat-containing protein 25-like NW_004955437 2585766 2597361 - 102011910 AGCD01034277;AGCD01034278 MODEL 8754387 protein-coding Nubp2 NUBP iron-sulfur cluster assembly factor 2, cytosolic PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); iron-sulfur cluster assembly complex (ortholog) NW_004955442 15482916 15486830 - 102022128 AGCD01037875;GBCQ01094849;XM_005391525;XR_001235361;XR_001235362 XP_005391582 MODEL 10193916 ncrna LOC106150026 uncharacterized LOC106150026 NW_004955461 3038169 3047728 + 106150026 AGCD01048845;GBDF01089417;XR_001236553;XR_001236554 MODEL 8794980 protein-coding Gjc2 gap junction protein gamma 2 ENCODES a protein that exhibits gap junction channel activity (ortholog); gap junction channel activity involved in cell communication by electrical coupling (ortholog); INVOLVED IN cell communication by electrical coupling (ortholog); cell-cell signaling (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Arachnodactyly (ortholog); Ataxia (ortholog); FOUND IN gap junction (ortholog); myelin sheath (ortholog); neuronal cell body (ortholog) NW_004955581 291537 294752 - 102022760 AGCD01075665;AGCD01075666;XM_013509723 XP_013365177 MODEL 8876170 trna Trnav-uac transfer RNA valine (anticodon UAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955586;NW_004955418;NW_004955511;NW_004955511 762475;25922316;4044144;4043788 762547;25922388;4044216;4043860 +;-;-;- 101978800 AGCD01019379;AGCD01066488;AGCD01076044 MODEL 9026608 pseudo LOC102024405 60S ribosomal protein L39 pseudogene NW_004955402 38749901 38750123 + 102024405 AGCD01000967;XM_005372945 MODEL 8931485 protein-coding Best1 bestrophin 1 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN chloride transport (ortholog); detection of light stimulus involved in visual perception (ortholog); gamma-aminobutyric acid secretion, neurotransmission (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant vitreoretinochoroidopathy (ortholog); bestrophinopathy (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); chloride channel complex (ortholog) NW_004955511 5773025 5783800 - 102007797 AGCD01066581;GBDF01053629;XM_005408133;XM_005408134;XM_013506425;XM_013506426;XR_001231698 XP_005408190;XP_005408191;XP_013361879;XP_013361880 MODEL 8867176 protein-coding G3bp2 G3BP stress granule assembly factor 2 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN protein homooligomerization (ortholog); stress granule assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955474 1565048 1632427 - 102010475 AGCD01054259;AGCD01054260;GBDI01172175;XM_005401321;XM_005401322;XM_005401323;XM_005401325;XM_005401327 XP_005401378;XP_005401379;XP_005401380;XP_005401382;XP_005401384 MODEL 8948569 protein-coding Wasf2 WASP family member 2 ENCODES a protein that exhibits protein kinase A binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); ameboidal-type cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell-cell junction (ortholog); early endosome (ortholog) NW_004955452 6658854 6733964 - 102004775 AGCD01044118;AGCD01044119;AGCD01044120;AGCD01044121;AGCD01044122;AGCD01044123;AGCD01044124;GBCE01074273;XM_005394909;XM_013519649 XP_005394966;XP_013375103 MODEL 8816075 protein-coding Serpinb1 serpin family B member 1 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); inflammatory response (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955465 10541562 10551417 + 102025988 AGCD01050510;GBDI01218214;XM_005398929 XP_005398986 MODEL 8912692 protein-coding Ddhd1 DDHD domain containing 1 INVOLVED IN positive regulation of mitochondrial fission (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); colon adenocarcinoma (ortholog) NW_004955409 10111299 10185603 + 102007519 AGCD01009459;AGCD01009460;GBDF01047416;XM_005376772;XM_013510321 XP_005376829;XP_013365775 MODEL 8717294 ncrna LOC102013421 uncharacterized LOC102013421 NW_004955487 9461547 9465656 - 102013421 AGCD01059459;XR_263994 MODEL 39131672 rrna 5S_rRNA 5S ribosomal RNA 8999362 ncrna LOC102005155 uncharacterized LOC102005155 NW_004955494 4421919 4432652 + 102005155 AGCD01061498;GBDF01157914;XR_001231313;XR_264112;XR_264113 MODEL 9042336 protein-coding LOC102003022 tubulin alpha chain-like NW_004955483 457068 458303 + 102003022 AGCD01057616;XM_013503762 XP_013359216 MODEL 8891187 ncrna LOC102004796 uncharacterized LOC102004796 NW_004955467 6856123 6857620 - 102004796 AGCD01051425;GBDI01226874;XR_263346 MODEL 39134148 misc_rna 7SK 7SK RNA 8786661 protein-coding LOC102023380 acyl-coenzyme A thioesterase THEM4-like NW_004955427 24601080 24609428 - 102023380 AGCD01027513;GBDI01314053;XM_005386553;XM_013515040 XP_005386610;XP_013370494 MODEL 8742580 protein-coding Cryba2 crystallin beta A2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 42 (ortholog); cerebrotendinous xanthomatosis (ortholog) NW_004955453 14438658 14444469 + 102027938 AGCD01044864;GBDF01088102;XM_005395611;XM_005395616;XM_005395617;XM_005395618;XM_005395619;XM_013519773;XM_013519774;XM_013519775;XM_013519776 XP_005395668;XP_005395673;XP_005395674;XP_005395675;XP_005395676;XP_013375227;XP_013375228;XP_013375229;XP_013375230 MODEL 10163415 ncrna LOC106149237 uncharacterized LOC106149237 NW_004955441 10156137 10161739 + 106149237 AGCD01037076;GBDJ01049785;XR_001235289 MODEL 8880345 protein-coding Ints13 integrator complex subunit 13 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN centrosome localization (ortholog); mitotic spindle organization (ortholog); protein localization to nuclear envelope (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955413 21779417 21813804 - 102004920 AGCD01014265;AGCD01014266;AGCD01014267;GBCB01003595;XM_005379644 XP_005379701 MODEL 8833305 pseudo LOC102023022 chromodomain Y-like protein NW_004955471 4640224 4642375 - 102023022 AGCD01053084 MODEL 8788822 protein-coding B4galnt2 beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group) ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); N-acetylneuraminylgalactosylglucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of cell-cell adhesion (ortholog); protein import (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) NW_004955451 12260885 12281301 - 102028047 AGCD01043382;AGCD01043383;AGCD01043384;GBDK01078472;XM_005394221 XP_005394278 MODEL 39132470 snrna U6 U6 spliceosomal RNA 8998077 protein-coding Myoz1 myozenin 1 ENCODES a protein that exhibits actinin binding (ortholog); FATZ binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of skeletal muscle tissue regeneration (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); urinary bladder cancer (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955437 18191514 18199122 + 102015567 AGCD01034780;GBDF01222569;XM_005389970 XP_005390027 MODEL 616940629 snorna SNORD93 small nucleolar RNA, C/D box 93 8770686 ncrna LOC102022665 uncharacterized LOC102022665 NW_004955406 12087669 12097907 - 102022665 AGCD01005907;GBDF01251069;XR_001236360;XR_001236361;XR_001236362 MODEL 8853252 protein-coding ND2 NADH dehydrogenase subunit 2 MT 3887 4930 + 15822220 JX312692 AFQ55778;YP_008080746 REVIEWED 8957836 ncrna LOC102006201 uncharacterized LOC102006201 NW_004955452 2332910 2343134 + 102006201 AGCD01043890;GBDF01181028;XR_262638;XR_262639 MODEL 8894794 protein-coding Kiaa0232 KIAA0232 ortholog ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955514 3581654 3630754 - 102018427 AGCD01067100;AGCD01067101;GBCQ01040836;GBCQ01040843;XM_013506822 XP_013362276 MODEL 10127659 pseudo LOC106147086 zinc finger protein 583-like NW_004955517 510840 513782 + 106147086 AGCD01067578 MODEL 8929205 pseudo LOC102005835 transcription initiation factor TFIID subunit 2-like NW_004955433 1848991 1866778 - 102005835 AGCD01031371;AGCD01031372 MODEL 8789124 protein-coding Hdac3 histone deacetylase 3 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cyclin binding (ortholog); INVOLVED IN cellular response to fluid shear stress (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Anaphylaxis (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955415 12138520 12154234 + 102004802 AGCD01016185;GBDF01049421;XM_005380723;XM_005380724;XM_005380725 XP_005380780;XP_005380781;XP_005380782 MODEL 39131673 rrna 5S_rRNA 5S ribosomal RNA 9045983 ncrna LOC102012286 uncharacterized LOC102012286 NW_004955408 21941027 22001034 + 102012286 AGCD01008567;GBBH01167569;XR_001232370;XR_259698 MODEL 8962479 pseudo LOC102003391 pre-mRNA-splicing factor RBM22 pseudogene NW_004955443 7720328 7734609 + 102003391 AGCD01038296;AGCD01038297 MODEL 39134460 misc_rna 7SK 7SK RNA 8908461 pseudo LOC102017980 60S ribosomal protein L37 pseudogene NW_004955478 84577 84852 + 102017980 AGCD01055731 MODEL 8778609 protein-coding Fgl1 fibrinogen like 1 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cholesterol metabolic process (ortholog); hepatocyte proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955552 1784046 1813935 + 102022233 AGCD01072787;AGCD01072788;GBDF01111290;XM_005412199 XP_005412256 MODEL 8961726 protein-coding Cxadr CXADR cell adhesion molecule ENCODES a protein that exhibits beta-catenin binding (ortholog); cell adhesion molecule binding (ortholog); connexin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); AV node cell to bundle of His cell communication (ortholog); AV node cell-bundle of His cell adhesion involved in cell communication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog) NW_004955407 18894853 18927129 + 102005228 AGCD01007289;GBCE01142120;GBDJ01239347;XM_013503863;XM_013503866 XP_013359317;XP_013359320 MODEL 8769994 protein-coding Plac1 placenta enriched 1 INVOLVED IN placenta development (ortholog); spongiotrophoblast layer developmental growth (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955473 264265 415616 + 102023583 AGCD01053834;AGCD01053835;AGCD01053836;GBDF01249559;XM_005401198;XM_013523053 XP_005401255;XP_013378507 MODEL 9049082 ncrna LOC102008798 uncharacterized LOC102008798 NW_004955592 168536 235179 + 102008798 AGCD01076300;AGCD01076301;GBDF01077466;XR_001232541;XR_001232542;XR_265134;XR_265135;XR_265136 MODEL 8915109 protein-coding Hmg20a high mobility group 20A ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of neuron differentiation (ortholog); negative regulation of protein sumoylation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955450 2285444 2362696 + 102022444 AGCD01042381;AGCD01042382;GBDF01085823;XM_005393490;XM_005393491;XM_005393492;XM_005393493;XM_013518883;XM_013518884 XP_005393547;XP_005393548;XP_005393549;XP_005393550;XP_013374337;XP_013374338 MODEL 8950746 pseudo LOC102010742 pre-mRNA-splicing factor RBM22 pseudogene NW_004955444 6844758 6848013 + 102010742 AGCD01038875 MODEL 8821015 protein-coding LOC102007653 protocadherin gamma-A2 NW_004955415 12431046 12434469 - 102007653 AGCD01016196;GBDI01053094;XM_013512164 XP_013367618 MODEL 8821884 pseudo LOC102011911 citrate synthase, mitochondrial-like NW_004955438 13790119 13791348 - 102011911 AGCD01035308 MODEL 9011007 protein-coding Nubpl NUBP iron-sulfur cluster assembly factor, mitochondrial ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrion organization (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arthralgia (ortholog); Ataxia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 28873609 29073196 - 102009918 AGCD01010246;AGCD01010247;AGCD01010248;AGCD01010249;AGCD01010250;AGCD01010251;AGCD01010252;AGCD01010253;GBDF01144891;XM_005376951;XM_005376952;XM_005376953;XM_005376954;XM_013510457 XP_005377008;XP_005377009;XP_005377010;XP_005377011;XP_013365911 MODEL 8960515 protein-coding Golm2 golgi membrane protein 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955416 10812414 10949563 + 102008724 AGCD01017158;AGCD01017159;AGCD01017160;AGCD01017161;AGCD01017162;AGCD01017163;AGCD01017164;AGCD01017165;AGCD01017166;GBBH01033800;GBDF01125189;XM_013512605 XP_013368059 MODEL 10287363 ncrna LOC106150027 uncharacterized LOC106150027 NW_004955461 14625185 14628313 - 106150027 AGCD01049057;GBDK01101991;XR_001236556 MODEL 9028304 protein-coding Psmd8 proteasome 26S subunit, non-ATPase 8 INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); human immunodeficiency virus infectious disease (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); synaptic vesicle (ortholog) NW_004955468 1044940 1052130 - 102016041 AGCD01051749;GBBH01033976;XM_013522469 XP_013377923 MODEL 8917902 protein-coding Arvcf ARVCF delta catenin family member ENCODES a protein that exhibits cadherin binding (ortholog); INVOLVED IN RNA splicing (ortholog); ASSOCIATED WITH astigmatism (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955442 18109421 18149969 + 102029232 AGCD01037997;AGCD01037998;GBDJ01339990;XM_005391761;XM_005391762;XM_013517785;XM_013517786;XM_013517787;XM_013517788;XM_013517789;XM_013517790;XM_013517791;XM_013517792;XM_013517793 XP_005391818;XP_005391819;XP_013373239;XP_013373240;XP_013373241;XP_013373242;XP_013373243;XP_013373244;XP_013373245;XP_013373246;XP_013373247 MODEL 8952073 protein-coding LOC102007302 chromosome unknown open reading frame, human C7orf57 ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955456 5399326 5414002 - 102007302 AGCD01046327;GBDK01321191;XM_005396629 XP_005396686 MODEL 8787852 ncrna LOC102013431 uncharacterized LOC102013431 NW_004955504 2733042 2738476 - 102013431 AGCD01064859;AGCD01064860;GBDF01281745;XR_264289 MODEL 8999123 ncrna LOC102025097 uncharacterized LOC102025097 NW_004955411 5016033 5019994 + 102025097 AGCD01011593;GBDJ01318909;XR_259918 MODEL 8965720 protein-coding Wasf3 WASP family member 3 INVOLVED IN lamellipodium assembly (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); oligodendrocyte development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); postsynapse (ortholog) NW_004955497 6100633 6190639 + 102028556 AGCD01062622;AGCD01062623;AGCD01062624;AGCD01062625;AGCD01062626;GBDF01158437;XM_005406347;XM_005406348;XM_005406349;XM_005406350 XP_005406404;XP_005406405;XP_005406406;XP_005406407 MODEL 8729245 protein-coding Ddhd2 DDHD domain containing 2 ENCODES a protein that exhibits diacylglycerol lipase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN lipid droplet organization (ortholog); locomotory behavior (ortholog); positive regulation of mitochondrial fission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955463 13836401 13856430 + 102022059 AGCD01049891;AGCD01049892;GBDF01119212;GBDI01173737;XM_013521496 XP_013376950 MODEL 8752182 protein-coding LOC102005156 olfactory receptor 4X2-like NW_004955422 356829 357764 + 102005156 AGCD01022404;XM_005384936 XP_005384993 MODEL 9031711 ncrna LOC102005842 uncharacterized LOC102005842 NW_004955439 2255721 2292358 + 102005842 AGCD01035638;AGCD01035639;AGCD01035640;GBBH01163336;XR_001235211;XR_001235212;XR_261967 MODEL 39133689 mirna MIR761 microRNA 761 9003340 protein-coding LOC102021325 serpin B9-like NW_004955465 10360723 10368587 - 102021325 AGCD01050507;XM_005398914 XP_005398971 MODEL 8877485 ncrna LOC102023031 uncharacterized LOC102023031 NW_004955417 10305485 10332256 + 102023031 AGCD01018071;GBDF01307283;XR_260471 MODEL 39131324 protein-coding GJC3 gap junction protein gamma 3 9067218 protein-coding LOC102024406 histone H3-like centromeric protein CSE4 NW_004955589 479165 495697 - 102024406 AGCD01076173;XM_005414584 XP_005414641 MODEL 8896121 protein-coding B4galnt3 beta-1,4-N-acetyl-galactosaminyltransferase 3 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955454 6583405 6603715 - 102028158 AGCD01045250;AGCD01045251;AGCD01045252;GBBH01011317;GBDK01183447;XM_013520228 XP_013375682 MODEL 8857471 protein-coding Ints14 integrator complex subunit 14 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955450 9892476 9925231 + 102005868 AGCD01042600;GBDK01320478;XM_005393717;XM_005393718 XP_005393774;XP_005393775 MODEL 9040590 protein-coding Best2 bestrophin 2 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); intracellularly ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); chloride channel complex (ortholog); cilium (ortholog) NW_004955415 31846053 31851628 + 102020907 AGCD01016698;GBCC01018119;XM_005381024 XP_005381081 MODEL 9052457 protein-coding ND3 NADH dehydrogenase subunit 3 MT 9465 9810 + 15822229 JX312692 AFQ55784;YP_008080752 REVIEWED 8870031 protein-coding Serpinb11 serpin family B member 11 ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955402 47564631 47585486 + 102025638 AGCD01001191;GBBH01001457;XM_005373034 XP_005373091 MODEL 8971926 protein-coding Mtpap mitochondrial poly(A) polymerase ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); mitochondrial mRNA polyadenylation (ortholog); mitochondrial RNA 3'-end processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955429 21768011 21792481 + 102019191 AGCD01029009;GBDF01195760;XM_005387190;XM_005387191 XP_005387247;XP_005387248 MODEL 8911819 protein-coding Cul9 cullin 9 INVOLVED IN microtubule cytoskeleton organization (ortholog); protein ubiquitination (ortholog); regulation of mitotic nuclear division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arthritis (ortholog); atrial heart septal defect (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog) NW_004955437 9109997 9145181 + 102004519 AGCD01034516;AGCD01034517;AGCD01034518;GBDJ01353552;XM_013516908 XP_013372362 MODEL 8989832 ncrna LOC102004798 uncharacterized LOC102004798 NW_004955467 11715338 11717008 - 102004798 AGCD01051616;GBDF01192925;XR_263361 MODEL 8797197 protein-coding Fam200c family with sequence similarity 200 member C ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955408 14262519 14266835 - 102025214 AGCD01008391;XM_005376260;XM_013508939 XP_005376317;XP_013364393 MODEL 39132630 rrna 5S_rRNA 5S ribosomal RNA 39134149 misc_rna 7SK 7SK RNA 39134461 misc_rna 7SK 7SK RNA 8959704 protein-coding LOC102003392 WAP four-disulfide core domain protein 10A NW_004955445 11634309 11635726 - 102003392 AGCD01039708;GBDF01230954;XM_005392420 XP_005392477 MODEL 8844659 pseudo LOC102005159 E3 SUMO-protein ligase PIAS2-like NW_004955503 7889282 7891162 + 102005159 AGCD01064803 MODEL 8717850 protein-coding Fgl2 fibrinogen like 2 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of dendritic cell antigen processing and presentation (ortholog); negative regulation of macrophage antigen processing and presentation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autoimmune glomerulonephritis (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog) NW_004955410 7899263 7903499 + 102010979 AGCD01010726;GBCE01075859;GBDF01281505;XM_005377557 XP_005377614 MODEL 8774666 protein-coding Cryba4 crystallin beta A4 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of eye lens (ortholog); INVOLVED IN camera-type eye development (ortholog); visual perception (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 23 (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955455 1176668 1187731 + 102017536 AGCD01045570;GBDI01100472;XM_005396157 XP_005396214 MODEL 9032219 pseudo LOC102007654 eukaryotic translation initiation factor 4 gamma 2 pseudogene NW_004955474 10505913 10506428 + 102007654 AGCD01054596;XM_005401468 MODEL 39132060 snorna SNORD94 small nucleolar RNA, C/D box 94 9058628 pseudo LOC102011913 60S ribosomal protein L35 pseudogene NW_004955545 891588 891958 - 102011913 AGCD01071824 MODEL 8729885 protein-coding Myoz2 myozenin 2 ENCODES a protein that exhibits actin binding (ortholog); telethonin binding (ortholog); INVOLVED IN negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); sarcomere organization (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); familial hypertrophic cardiomyopathy (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); Z disc (ortholog) NW_004955428 21052352 21088468 - 102023382 AGCD01028131;AGCD01028132;GBDI01324500;XM_005386798 XP_005386855 MODEL 9056927 ncrna LOC102003024 uncharacterized LOC102003024 NW_004955419 21702352 21717956 + 102003024 AGCD01020282;GBDF01056389;XR_001233586;XR_001233587;XR_001233588;XR_001233589;XR_001233590;XR_001233591;XR_260649 MODEL 8849007 protein-coding Kiaa0319 KIAA0319 ortholog INVOLVED IN central nervous system neuron development (ortholog); multicellular organismal response to stress (ortholog); negative regulation of axon extension (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); plasma membrane (ortholog) NW_004955483 2404061 2463210 + 102011123 AGCD01057676;AGCD01057677;AGCD01057678;GBDF01262006;XM_005403369;XM_005403370;XM_013503840 XP_005403426;XP_005403427;XP_013359294 MODEL 39131321 protein-coding ARX aristaless related homeobox 9009133 protein-coding Hdac4 histone deacetylase 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN A band (ortholog); actomyosin (ortholog); chromatin (ortholog) NW_004955542 1629691 1886160 + 102021917 AGCD01071506;AGCD01071507;GBCE01162161;XM_005411176;XM_005411177;XM_005411178;XM_013508107;XM_013508108;XM_013508109;XM_013508110;XM_013508111;XM_013508112;XM_013508113;XM_013508114 XP_005411233;XP_005411234;XP_005411235;XP_013363561;XP_013363562;XP_013363563;XP_013363564;XP_013363565;XP_013363566;XP_013363567;XP_013363568 MODEL 8700329 protein-coding LOC102007304 zinc finger protein 354B NW_004955408 1507667 1520239 - 102007304 AGCD01007961;AGCD01007962;GBCB01038326;GBCE01165511;XM_005376027;XM_013507968 XP_005376084;XP_013363422 MODEL 8793170 ncrna LOC102012289 uncharacterized LOC102012289 NW_004955410 7716614 7721059 + 102012289 AGCD01010722;GBDK01172238;XR_259826 MODEL 8937339 trna Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978834 AGCD01005375;AGCD01048768;AGCD01051216;AGCD01051466;AGCD01051471;AGCD01057629 MODEL 9038190 ncrna LOC102008799 uncharacterized LOC102008799 NW_004955402 56514337 56517087 + 102008799 AGCD01001468;GBDF01212633;XR_259105 MODEL 39134462 misc_rna 7SK 7SK RNA 8897851 protein-coding LOC102004805 cystatin-12-like NW_004955415 30453323 30456586 + 102004805 AGCD01016664;GBDF01005832;XM_005380969 XP_005381026 MODEL 8741554 protein-coding Cxcl10 C-X-C motif chemokine ligand 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955433 748392 750890 - 102012569 AGCD01031336;GBDJ01185780;XM_013516266 XP_013371720 MODEL 8801421 protein-coding LOC102021328 alpha-2-macroglobulin-like NW_004955413 5885352 5996030 - 102021328 AGCD01013695;AGCD01013696;AGCD01013697;GBDI01211358;XM_005378888;XM_013511450;XM_013511451;XM_013511453;XR_260065 XP_005378945;XP_013366904;XP_013366905;XP_013366907 MODEL 9064193 protein-coding Hmg20b high mobility group 20B INVOLVED IN negative regulation of protein sumoylation (ortholog); positive regulation of neuron differentiation (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955495 5515996 5530424 + 102003565 AGCD01062009;AGCD01062010;GBBH01191811;XM_005405867;XM_005405868;XM_005405869;XM_005405870;XM_005405871 XP_005405924;XP_005405925;XP_005405926;XP_005405927;XP_005405928 MODEL 8902009 protein-coding LOC102022667 complement factor H NW_004955406 33501759 33581744 + 102022667 AGCD01006478;AGCD01006479;AGCD01006480;AGCD01006481;AGCD01006482;AGCD01006483;GBCQ01035933;XM_005375112;XM_005375113 XP_005375169;XP_005375170 MODEL 9041558 protein-coding Gjc3 gap junction protein gamma 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN myelination (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); sensorineural hearing loss (ortholog); FOUND IN myelin sheath (ortholog) NW_004955573 944440 951440 + 102005527 AGCD01075010;GBDI01039702;XM_005413763 XP_005413820 MODEL 8737426 protein-coding Golph3 golgi phosphoprotein 3 ENCODES a protein that exhibits cargo adaptor activity (ortholog); enzyme binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN asymmetric Golgi ribbon formation (ortholog); cell adhesion molecule production (ortholog); cell migration (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); Golgi apparatus (ortholog) NW_004955426 17980514 18017041 - 102022105 AGCD01026509;GBDI01062477;XM_005386154;XM_005386155 XP_005386211;XP_005386212 MODEL 8862704 pseudo LOC102024411 olfactory receptor 1571-like NW_004955626 143148 144021 + 102024411 AGCD01077469 MODEL 9023152 ncrna LOC102025099 uncharacterized LOC102025099 NW_004955411 35546106 35572131 - 102025099 AGCD01012440;XR_259954 MODEL 8887047 protein-coding LOC102009953 uncharacterized LOC102009953 NW_004955489 8135465 8209866 - 102009953 AGCD01060001;AGCD01060002;AGCD01060003;AGCD01060004;AGCD01060005;AGCD01060006;AGCD01060007;GBDJ01241202;XM_013504450 XP_013359904 MODEL 10114782 ncrna LOC106147087 uncharacterized LOC106147087 NW_004955408 35473043 35581443 + 106147087 AGCD01008946;AGCD01008947;AGCD01008948;AGCD01008949;AGCD01008950;AGCD01008951;AGCD01008952;AGCD01008953;AGCD01008954;AGCD01008955;AGCD01008956;AGCD01008957;XR_001231823;XR_001231824;XR_001231826 MODEL 8710758 protein-coding LOC102023385 olfactory receptor 4A47-like NW_004955511 106509 107426 - 102023385 AGCD01066320;XM_005407936 XP_005407993 MODEL 8886178 protein-coding ND4 NADH dehydrogenase subunit 4 MT 10171 11548 + 15822211 JX312692 AFQ55786;YP_008080754 REVIEWED 10158854 ncrna LOC106149238 uncharacterized LOC106149238 NW_004955441 11998097 11999475 - 106149238 AGCD01037116;GBCE01036095;XR_001235290 MODEL 8788617 protein-coding LOC102017983 histone H3 NW_004955483 832295 834112 - 102017983 AGCD01057632;XM_013503790 XP_013359244 MODEL 8760439 pseudo LOC102005851 40S ribosomal protein S2-like NW_004955444 6571938 6576569 - 102005851 AGCD01038872;XR_262283 MODEL 39132472 snrna U6 U6 spliceosomal RNA 8959118 protein-coding Fam204a family with sequence similarity 204 member A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955431 22920076 22947959 - 102003995 AGCD01030524;GBCB01059382;XM_005387877;XM_005387878 XP_005387934;XP_005387935 MODEL 8970391 protein-coding Ddi1 DDI proteasomal shuttling factor 1 INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); regulation of DNA stability (ortholog) NW_004955412 6980778 6982453 + 102020780 AGCD01012685;GBDF01003996;XM_013511229 XP_013366683 MODEL 8944265 protein-coding G6pc1 glucose-6-phosphatase catalytic subunit 1 ENCODES a protein that exhibits glucose-6-phosphatase activity (ortholog); phosphate ion binding (ortholog); phosphotransferase activity, alcohol group as acceptor (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cholesterol homeostasis (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN altered galactose metabolic pathway; Fanconi syndrome pathway; forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955451 16672512 16680001 + 102027602 AGCD01043697;GBCQ01064237;XM_005394489;XR_262621 XP_005394546 MODEL 8924525 pseudo LOC102010743 olfactory receptor 7G1-like NW_004955563 294341 295318 - 102010743 AGCD01074059 MODEL 8979519 ncrna LOC102023036 uncharacterized LOC102023036 NW_004955483 8469720 8483504 + 102023036 AGCD01057837;GBDF01162509;XR_001231031;XR_263870 MODEL 8838773 protein-coding Nucb1 nucleobindin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of protein targeting (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955559 1723986 1739776 - 102029016 AGCD01073664;GBBH01003972;XM_005412925;XM_013509036 XP_005412982;XP_013364490 MODEL 10386019 ncrna LOC106150028 uncharacterized LOC106150028 NW_004955461 8271377 8274545 - 106150028 AGCD01048927;XR_001236557 MODEL 8724068 protein-coding Crybb1 crystallin beta B1 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 17 multiple types (ortholog) NW_004955455 1165048 1180826 - 102018059 AGCD01045570;GBBH01043266;XM_005396158 XP_005396215 MODEL 8770373 protein-coding LOC102013433 ras-related protein Rab-7a-like NW_004955429 13690345 13691311 - 102013433 AGCD01028762;GBDI01000890;XM_013515500 XP_013370954 MODEL 39131674 rrna 5S_rRNA 5S ribosomal RNA 8878409 protein-coding Best3 bestrophin 3 ENCODES a protein that exhibits chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); ligand-gated monoatomic anion channel activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); negative regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH aortic dissection (ortholog); atrial fibrillation (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 9957595 10031193 - 102026284 AGCD01004801;AGCD01004802;GBDI01011038;XM_013517529;XM_013517531 XP_013372983;XP_013372985 MODEL 9059309 protein-coding Myoz3 myozenin 3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN Z disc (ortholog) NW_004955415 3908424 3922114 - 102013822 AGCD01015958;GBDJ01299576;XM_005380569;XM_005380570;XM_013512223 XP_005380626;XP_005380627;XP_013367677 MODEL 8704748 protein-coding Serpinb12 serpin family B member 12 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN cornified envelope (ortholog) NW_004955402 47338874 47361485 + 102024072 AGCD01001180;GBDI01178459;XM_005373030 XP_005373087 MODEL 8749681 protein-coding Mtpn myotrophin ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cerebellar granule cell differentiation (ortholog); positive regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955494 6805518 6844454 + 102008233 AGCD01061543;GBDF01053118;XM_005405470 XP_005405527 MODEL 8897789 pseudo LOC102003025 splicing factor 3A subunit 1-like NW_004955419 15519929 15520421 + 102003025 AGCD01020083 MODEL 39132637 rrna 5S_rRNA 5S ribosomal RNA 39133683 mirna MIR767 microRNA 767 8728817 pseudo LOC102007307 40S ribosomal protein S25-like NW_004955408 19623818 19624387 - 102007307 AGCD01008529 MODEL 8954218 pseudo LOC102003393 zinc finger protein 14-like NW_004955569 1162650 1186999 - 102003393 AGCD01074643;XM_005413495 MODEL 8702252 ncrna LOC102006202 uncharacterized LOC102006202 NW_004955452 4902765 4908470 + 102006202 AGCD01044001;GBCC01009101;XR_262655 MODEL 8787692 pseudo LOC102007660 calcyclin-binding protein-like NW_004955418 14381275 14381936 + 102007660 AGCD01019075 MODEL 8916024 protein-coding Psmd9 proteasome 26S subunit, non-ATPase 9 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of insulin secretion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); proteasome regulatory particle, base subcomplex (ortholog) NW_004955482 6555902 6567481 - 102009946 AGCD01057403;GBCB01039020;XM_005403105 XP_005403162 MODEL 616940648 snorna SNORD95 small nucleolar RNA, C/D box 95 8985440 pseudo LOC102011914 N-alpha-acetyltransferase 50 pseudogene NW_004955441 5500863 5501537 + 102011914 AGCD01036878 MODEL 8869583 protein-coding Cxcl11 C-X-C motif chemokine ligand 11 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR chemokine receptor binding (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemokine-mediated signaling pathway (ortholog); ASSOCIATED WITH bacterial pneumonia (ortholog); bronchiolitis obliterans (ortholog); celiac disease (ortholog); FOUND IN membrane (ortholog) NW_004955433 769449 771137 - 102012233 AGCD01031336;GBDJ01304389;XM_013516267 XP_013371721 MODEL 8895643 protein-coding B4galnt4 beta-1,4-N-acetyl-galactosaminyltransferase 4 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955476 11624612 11635317 - 102012641 AGCD01055466;AGCD01055467;GBDI01059942;GBDJ01087029;XM_013502997 XP_013358451 MODEL 8896877 protein-coding Plac8 placenta associated 8 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); defense response to bacterium (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Chlamydiaceae Infections (ortholog); Escherichia Coli Infections (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955474 6518459 6533251 + 102030066 AGCD01054481;GBBH01004306;XM_005401386 XP_005401443 MODEL 8986472 protein-coding Washc2c WASH complex subunit 2C ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); negative regulation of barbed-end actin filament capping (ortholog); protein localization to endosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endosome (ortholog) NW_004955546 2718758 2764277 - 102018987 AGCD01072099;AGCD01072100;GBDI01070765;XM_013508426;XM_013508427;XM_013508428 XP_013363880;XP_013363881;XP_013363882 MODEL 8701905 ncrna LOC102024423 uncharacterized LOC102024423 NW_004955453 14383498 14394719 - 102024423 AGCD01044864;GBDF01252476;XR_001236145;XR_001236146;XR_262734;XR_262735 MODEL 8806175 protein-coding LOC102025102 uncharacterized LOC102025102 NW_004955466 10805473 10806476 + 102025102 AGCD01051077;GBDF01213392;XM_005399201 XP_005399258 MODEL 8909713 protein-coding LOC102013434 uncharacterized LOC102013434 NW_004955430 2174725 2183009 + 102013434 AGCD01029156;GBDK01214826;XM_005387309 XP_005387366 MODEL 8841658 pseudo LOC102023389 40S ribosomal protein S29-like NW_004955435 12512261 12513208 - 102023389 AGCD01033149 MODEL 8918502 protein-coding Kiaa0319l KIAA0319 like INVOLVED IN acrosome assembly (ortholog); flagellated sperm motility (ortholog); neuron migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955452 13538524 13649823 - 102019019 AGCD01044421;AGCD01044422;AGCD01044423;AGCD01044424;AGCD01044425;AGCD01044426;AGCD01044427;AGCD01044428;AGCD01044429;GBBH01115551;XM_005395143;XM_005395144;XM_005395145 XP_005395200;XP_005395201;XP_005395202 MODEL 8804010 protein-coding ND4L NADH dehydrogenase subunit 4L MT 9881 10177 + 15822230 JX312692 AFQ55785;YP_008080753 REVIEWED 8802976 ncrna LOC102012292 uncharacterized LOC102012292 NW_004955463 1605016 1606453 - 102012292 AGCD01049525;GBDJ01265798;XR_001236656 MODEL 9046623 protein-coding Hdac5 histone deacetylase 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN cellular response to fluid shear stress (ortholog); cellular response to lipopolysaccharide (ortholog); heart development (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); adjustment disorder (ortholog); bipolar disorder (ortholog); FOUND IN axonal growth cone (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955451 17223217 17246451 - 102008369 AGCD01043730;GBDI01010961;XM_005394517;XM_013519202;XM_013519203;XM_013519204;XM_013519205;XM_013519206;XM_013519207;XM_013519208;XM_013519209 XP_005394574;XP_013374656;XP_013374657;XP_013374658;XP_013374659;XP_013374660;XP_013374661;XP_013374662;XP_013374663 MODEL 8794878 protein-coding LOC102017986 neutrophil gelatinase-associated lipocalin-like NW_004955419 46267 52358 - 102017986 AGCD01019560;AGCD01019561;GBDJ01026132;XM_005382913 XP_005382970 MODEL 8705700 ncrna LOC102005160 uncharacterized LOC102005160 NW_004955505 2073316 2169827 - 102005160 AGCD01064984;AGCD01064985;GBDF01195356;XR_001231571;XR_264302;XR_264303 MODEL 15036850 trna Trnay-aua transfer RNA tyrosine (anticodon AUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978818 8905569 pseudo LOC102004807 putative protein FAM10A5 NW_004955415 13842980 13844236 - 102004807 AGCD01016270 MODEL 39134463 misc_rna 7SK 7SK RNA 8939400 protein-coding Fgr FGR proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits Fc-gamma receptor I complex binding (ortholog); immunoglobulin receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN bone mineralization (ortholog); defense response to Gram-positive bacterium (ortholog); integrin-mediated signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); plasma membrane (ortholog) NW_004955452 6840274 6863460 - 102007181 AGCD01044127;GBDJ01006866;XM_005394919;XM_005394920;XM_005394921;XM_005394922;XM_013519583;XM_013519584 XP_005394976;XP_005394977;XP_005394978;XP_005394979;XP_013375037;XP_013375038 MODEL 8997017 protein-coding G6pc2 glucose-6-phosphatase catalytic subunit 2 ENCODES a protein that exhibits glucose-6-phosphatase activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH type 1 diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955449 5519541 5525310 - 102004216 AGCD01041939;XM_005393271 XP_005393328 MODEL 9019659 protein-coding Fam20a FAM20A golgi associated secretory pathway pseudokinase ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); calcium ion homeostasis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta type 1G (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955478 4182568 4236819 + 102026000 AGCD01055845;GBBH01166907;GBCE01029092;XM_005402116 XP_005402173 MODEL 8846512 protein-coding Hmga1 high mobility group AT-hook 1 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autophagy (ortholog); B cell differentiation (ortholog); base-excision repair (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hyperglycemia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear membrane (ortholog) NW_004955437 2478414 2486809 + 102014603 AGCD01034270;AGCD01034271;GBDI01001510;XM_013517084;XM_013517085;XM_013517086 XP_013372538;XP_013372539;XP_013372540 MODEL 10115520 ncrna LOC106150029 uncharacterized LOC106150029 NW_004955461 43852 50652 - 106150029 AGCD01048788;GBDF01054958;XR_001236560;XR_001236561 MODEL 39131675 rrna 5S_rRNA 5S ribosomal RNA 8812891 protein-coding Plac8l1 PLAC8 like 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955415 7990558 8024998 + 102018489 AGCD01016060;AGCD01016061;AGCD01016062;AGCD01016063;GBDF01304882;XM_005380681;XM_005380682 XP_005380738;XP_005380739 MODEL 8776291 protein-coding Crybb3 crystallin beta B3 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 22 multiple types (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955455 45499 50694 - 102009686 AGCD01045552;GBDF01078219;XM_013520402 XP_013375856 MODEL 8796823 protein-coding Cxcl12 C-X-C motif chemokine ligand 12 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); CXCR chemokine receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); ameboidal-type cell migration (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; syndecan signaling pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955546 1929269 1941690 - 102011699 AGCD01072081;GBDI01001502;XM_005411777;XM_005411778 XP_005411834;XP_005411835 MODEL 10160299 ncrna LOC106149239 uncharacterized LOC106149239 NW_004955441 10255342 10261006 - 106149239 AGCD01037082;GBCE01107026;XR_001235291;XR_001235292;XR_001235293 MODEL 8961365 protein-coding Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ENCODES a protein that exhibits methionine synthase activity (ortholog); methyltransferase activity (ortholog); INVOLVED IN axon regeneration (ortholog); cellular response to methionine (ortholog); cellular response to nitric oxide (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; altered folate mediated one-carbon metabolic pathway; choline metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); Ataxia (ortholog) NW_004955492 3372915 3474173 - 102016390 AGCD01060695;AGCD01060696;AGCD01060697;AGCD01060698;GBDJ01350321;XM_005404926;XM_005404927 XP_005404983;XP_005404984 MODEL 8823994 protein-coding LOC102008803 vomeronasal type-1 receptor 4-like NW_004955603 30312 31232 - 102008803 AGCD01076804;XM_005414841 XP_005414898 MODEL 8838594 protein-coding LOC102021330 olfactory receptor 51A4-like NW_004955414 20549923 20550842 - 102021330 AGCD01015380;XM_013511771 XP_013367225 MODEL 8876911 pseudo LOC102022668 R3H domain-containing protein 2 pseudogene NW_004955454 3704267 3724341 - 102022668 AGCD01045095 MODEL 8795893 pseudo LOC102023040 actin-related protein 2/3 complex subunit 1A-like NW_004955420 13377017 13378758 + 102023040 AGCD01020920 MODEL 8728718 protein-coding Gjd2 gap junction protein delta 2 INVOLVED IN action potential (ortholog); cell-cell signaling (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH Brain Hypoxia (ortholog); myopia (ortholog); refractive error (ortholog); FOUND IN gap junction (ortholog) NW_004955416 2104985 2134937 - 102003866 AGCD01016848;AGCD01016849;XM_005381685 XP_005381742 MODEL 8725329 protein-coding Golph3l golgi phosphoprotein 3 like ENCODES a protein that exhibits cargo adaptor activity (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN Golgi organization (ortholog); positive regulation of protein secretion (ortholog); protein targeting to Golgi apparatus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955413 154696 183657 + 102008297 AGCD01013440;AGCD01013441;AGCD01013442;AGCD01013443;GBDF01221489;XM_005378663;XM_005378664;XM_013511413 XP_005378720;XP_005378721;XP_013366867 MODEL 9043808 ncrna LOC102009955 uncharacterized LOC102009955 NW_004955490 5851097 5894388 + 102009955 AGCD01060211;GBDK01242204;XR_001231206;XR_001231207;XR_264028 MODEL 10368634 ncrna LOC106147088 uncharacterized LOC106147088 NW_004955517 1480877 1499189 + 106147088 AGCD01067598;AGCD01067599;GBDI01195112;XR_001231822 MODEL 9037244 protein-coding Arx aristaless related homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon guidance (ortholog); cell proliferation in forebrain (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Aicardi syndrome (ortholog); Apnea (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955509 5326145 5338250 - 102023829 AGCD01066100;AGCD01066101;AGCD01066102;GBCB01025528;GBCB01040697;XM_013506289 XP_013361743 MODEL 39134150 misc_rna 7SK 7SK RNA 8943657 protein-coding Ddi2 DDI proteasomal shuttling factor 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); protein processing (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955527 2498211 2534768 - 102010728 AGCD01069439;AGCD01069440;AGCD01069441;AGCD01069442;AGCD01069443;AGCD01069444;GBCE01085284;GBDJ01084867;XM_005409866 XP_005409923 MODEL 9023669 protein-coding Ints15 integrator complex subunit 15 INVOLVED IN brain development (ortholog); eye development (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN chromosome (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955460 13106906 13118531 - 102019147 AGCD01048671;GBDF01154363;XM_005397884;XM_013521245 XP_005397941;XP_013376699 MODEL 8751739 protein-coding Best4 bestrophin 4 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); ASSOCIATED WITH lymphoma (ortholog) NW_004955464 13434429 13439108 + 102011635 AGCD01050277;AGCD01050278;GBDI01362790;XM_005398742 XP_005398799 MODEL 8863532 protein-coding Serpinb13 serpin family B member 13 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of endopeptidase activity (ortholog); negative regulation of keratinocyte apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955402 47376973 47395267 + 102024407 AGCD01001180;AGCD01001181;XM_005373031 XP_005373088 MODEL 8753712 protein-coding LOC102024431 olfactory receptor 9-like NW_004955458 3112558 3113496 - 102024431 AGCD01047271;XM_013520801 XP_013376255 MODEL 39132473 snrna U6 U6 spliceosomal RNA 8910156 protein-coding LOC102003026 uncharacterized LOC102003026 NW_004955485 9190059 9193837 + 102003026 AGCD01058751;AGCD01058752;GBDF01251522;XM_013504053 XP_013359507 MODEL 39132643 rrna 5S_rRNA 5S ribosomal RNA 151707887 mirna MIR770 microRNA 770 9040282 protein-coding LOC102010745 zinc finger protein 20-like NW_004955569 269498 273133 + 102010745 AGCD01074571;XM_005413507 XP_005413564 MODEL 8742057 protein-coding LOC102007312 estradiol 17 beta-dehydrogenase 5-like NW_004955463 77186 79987 - 102007312 AGCD01049471;GBDJ01183249;XM_005398329 XP_005398386 MODEL 8753350 pseudo LOC102003398 ubiquitin domain-containing protein 2 pseudogene NW_004955633 68363 69344 + 102003398 AGCD01077591 MODEL 8757293 ncrna LOC102006203 uncharacterized LOC102006203 NW_004955404 45391064 45417702 - 102006203 AGCD01004443;GBDF01040437;XR_259340 MODEL 8871429 pseudo LOC102017994 olfactory receptor 7E24-like NW_004955495 730711 731673 - 102017994 AGCD01061651 MODEL 8763197 protein-coding LOC102023391 trace amine-associated receptor 4-like NW_004955436 13158822 13159865 - 102023391 AGCD01033854;XM_005389214 XP_005389271 MODEL 9007734 ncrna LOC102007661 uncharacterized LOC102007661 NW_004955482 3985965 4000816 - 102007661 AGCD01057276;AGCD01057277;AGCD01057278;GBDF01089354;XR_001231002;XR_001231003;XR_263828 MODEL 8987903 protein-coding Hdac6 histone deacetylase 6 ENCODES a protein that exhibits acetylspermidine deacetylase activity (ortholog); alpha-tubulin binding (ortholog); ATPase inhibitor activity (ortholog); INVOLVED IN actin filament organization (ortholog); aggresome assembly (ortholog); axonal transport of mitochondrion (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN aggresome (ortholog); axon (ortholog); caveola (ortholog) NW_004955543 348314 378391 + 102025047 AGCD01071576;AGCD01071577;AGCD01071578;AGCD01071579;GBDI01173523;XM_005411280;XM_005411281;XM_005411282;XM_005411283;XM_005411284;XM_013508165;XM_013508166 XP_005411337;XP_005411338;XP_005411339;XP_005411340;XP_005411341;XP_013363619;XP_013363620 MODEL 8951451 pseudo LOC102011915 solute carrier family 35 member G1-like NW_004955549 2589395 2589895 + 102011915 AGCD01072478 MODEL 9040167 protein-coding CUNH10orf105 chromosome unknown C10orf105 homolog ASSOCIATED WITH autosomal recessive nonsyndromic deafness 12 (ortholog); Usher syndrome (ortholog) NW_004955437 19767395 19772447 + 102004321 AGCD01034865;GBDF01170530;XM_005390023;XM_005390024;XM_005390025;XM_005390026 XP_005390080;XP_005390081;XP_005390082;XP_005390083 MODEL 39131418 protein-coding WASHC3 WASH complex subunit 3 8934816 protein-coding Fh fumarate hydratase ENCODES a protein that exhibits fumarate hydratase activity (ortholog); histone binding (ortholog); INVOLVED IN arginine metabolic process (ortholog); DNA damage response (ortholog); fumarate metabolic process (ortholog); PARTICIPATES IN altered citric acid cycle pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Ataxia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); breast cancer (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 10535801 10558649 + 102018465 AGCD01005864;GBCB01004752;XM_005374820 XP_005374877 MODEL 9030709 protein-coding Hmga2 high mobility group AT-hook 2 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); C2H2 zinc finger domain binding (ortholog); cAMP response element binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adrenal gland development (ortholog); base-excision repair (ortholog); PARTICIPATES IN Ras mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Birth Weight (ortholog); cervical cancer (ortholog); FOUND IN nuclear chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955458 12493790 12624805 + 102023008 AGCD01047780;AGCD01047781;AGCD01047782;AGCD01047783;AGCD01047784;GBCE01155682;GBDJ01377489;XM_013521020 XP_013376474 MODEL 8944312 protein-coding Fam20b FAM20B glycosaminoglycan xylosylkinase ENCODES a protein that exhibits phosphotransferase activity, alcohol group as acceptor (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955406 18357394 18400743 + 102027809 AGCD01006030;AGCD01006031;AGCD01006032;AGCD01006033;AGCD01006034;GBCB01022788;XM_005374941;XM_013521110;XM_013521113;XM_013521117;XM_013521118;XM_013521130 XP_005374998;XP_013376564;XP_013376567;XP_013376571;XP_013376572;XP_013376584 MODEL 8713180 pseudo LOC102005852 60S ribosomal protein L21 pseudogene NW_004955565 1247877 1249322 - 102005852 AGCD01074307 MODEL 8933391 ncrna LOC102025104 uncharacterized LOC102025104 NW_004955467 4852986 4885256 + 102025104 AGCD01051375;XR_001236831;XR_263334 MODEL 9042633 protein-coding Golt1a golgi transport 1A ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi cis cisterna (ortholog); nuclear envelope (ortholog) NW_004955406 40049060 40061902 - 102019242 AGCD01006652;AGCD01006653;GBDJ01371333;XM_005375289 XP_005375346 MODEL 9028574 protein-coding Gjd4 gap junction protein delta 4 INVOLVED IN regulation of satellite cell activation involved in skeletal muscle regeneration (ortholog); FOUND IN plasma membrane (ortholog) NW_004955462 5893296 5901976 - 102029378 AGCD01049264;GBDF01182746;XM_005398156;XM_005398157 XP_005398213;XP_005398214 MODEL 8970117 protein-coding Kiaa0408 KIAA0408 ortholog NW_004955436 8452558 8471086 - 102008977 AGCD01033742;GBCB01089871;XM_005389171;XM_013516630 XP_005389228;XP_013372084 MODEL 8763413 protein-coding ND5 NADH dehydrogenase subunit 5 MT 11751 13574 + 15822233 JX312692 AFQ55787;YP_008080755 REVIEWED 8905457 trna Trnay-gua transfer RNA tyrosine (anticodon GUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978819 AGCD01039088;AGCD01052488;AGCD01057606;AGCD01072575;AGCD01072578 MODEL 8876798 ncrna LOC102024432 uncharacterized LOC102024432 NW_004955460 10071259 10078235 - 102024432 AGCD01048571;AGCD01048572;GBDF01024354;XR_001236506;XR_001236507 MODEL 8895333 pseudo LOC102008806 28S ribosomal protein S36, mitochondrial pseudogene NW_004955451 2025250 2026677 + 102008806 AGCD01043004;XM_005393966 MODEL 8723184 ncrna LOC102004808 uncharacterized LOC102004808 NW_004955476 10982505 10987287 - 102004808 AGCD01055434;GBDF01013264;XR_263645;XR_263646 MODEL 39134464 misc_rna 7SK 7SK RNA 8881076 protein-coding LOC102003401 protein MTO1 homolog, mitochondrial-like NW_004955981 5824 8486 + 102003401 AGCD01078801;AGCD01078802;XM_013510212 XP_013365666 MODEL 8965781 protein-coding ND6 NADH dehydrogenase subunit 6 MT 13564 14091 - 15822213 JX312692 AFQ55788;YP_008080756 REVIEWED 39134151 misc_rna 7SK 7SK RNA 10281225 ncrna LOC106150030 uncharacterized LOC106150030 NW_004955461 14354856 14355769 + 106150030 AGCD01049055;GBDF01021681;XR_001236564 MODEL 9015187 protein-coding LOC102013435 endogenous retrovirus group K member 18 Pol protein-like NW_004955511 4811817 4815683 + 102013435 AGCD01066527;XM_013506412 XP_013361866 MODEL 10115508 protein-coding LOC106149240 uncharacterized LOC106149240 NW_004955441 13737303 13749751 - 106149240 AGCD01037160;XM_013517513 XP_013372967 MODEL 8745040 protein-coding Cxcl13 C-X-C motif chemokine ligand 13 ENCODES a protein that exhibits CCR10 chemokine receptor binding (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); B cell chemotaxis (ortholog); B cell chemotaxis across high endothelial venule (ortholog); ASSOCIATED WITH endometriosis (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955433 2123190 2129119 + 102017597 AGCD01031382;GBDF01093996;XM_005388194 XP_005388251 MODEL 8746796 pseudo LOC102003030 high mobility group protein B2 pseudogene NW_004955420 23360748 23364378 - 102003030 AGCD01021245 MODEL 8856017 protein-coding Nucb2 nucleobindin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN insulin metabolic process (ortholog); negative regulation of appetite (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955414 32062870 32104117 + 102008307 AGCD01015769;AGCD01015770;AGCD01015771;AGCD01015772;AGCD01015773;GBDI01067335;XM_005380377;XM_005380378;XM_013512085 XP_005380434;XP_005380435;XP_013367539 MODEL 39132474 snrna U6 U6 spliceosomal RNA 9027708 protein-coding Mtres1 mitochondrial transcription rescue factor 1 ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); RNA binding (ortholog); tRNA binding (ortholog); INVOLVED IN regulation of mitochondrial transcription (ortholog); rescue of stalled mitochondrial ribosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN mitochondrial matrix (ortholog) NW_004955411 32318079 32338597 + 102007637 AGCD01012307;AGCD01012308;AGCD01012309;GBCB01024805;GBCE01170761;XM_005377833 XP_005377890 MODEL 8982280 protein-coding LOC102006204 hematopoietic prostaglandin D synthase NW_004955405 565811 595570 + 102006204 AGCD01004574;AGCD01004575;AGCD01004576;AGCD01004577;AGCD01004578;AGCD01004579;GBBH01172499;GBCE01033157;XM_013517297 XP_013372751 MODEL 9002165 protein-coding Crybg1 crystallin beta-gamma domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955411 31781954 31898017 + 102006436 AGCD01012287;AGCD01012288;AGCD01012289;GBDF01014569;XM_005377829;XM_013510790 XP_005377886;XP_013366244 MODEL 8982673 ncrna LOC102022671 uncharacterized LOC102022671 NW_004955407 26763176 26800372 + 102022671 AGCD01007537;GBDF01013649;XR_259589 MODEL 8907133 protein-coding Gk glycerol kinase ENCODES a protein that exhibits glycerol kinase activity (ortholog); histone binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); glycerol metabolic process (ortholog); glycerol-3-phosphate biosynthetic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955531 106761 183347 - 102016514 AGCD01069974;AGCD01069975;GBDI01289987;XM_005410125;XM_005410126;XM_013507561;XM_013507562;XM_013507563 XP_005410182;XP_005410183;XP_013363015;XP_013363016;XP_013363017 MODEL 8747847 protein-coding Mypn myopalladin ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); muscle alpha-actinin binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN sarcomere organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); I band (ortholog) NW_004955425 20461654 20545626 + 102022104 AGCD01025731;AGCD01025732;AGCD01025733;AGCD01025734;AGCD01025735;AGCD01025736;AGCD01025737;AGCD01025738;GBCB01000508;GBDF01193678;XM_013514883 XP_013370337 MODEL 8784950 protein-coding G6pc3 glucose-6-phosphatase catalytic subunit 3 ENCODES a protein that exhibits glucose-6-phosphatase activity (ortholog); INVOLVED IN gluconeogenesis (ortholog); glucose 6-phosphate metabolic process (ortholog); glucose-6-phosphate transport (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); COVID-19 (ortholog); cryptorchidism (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955451 17219763 17221889 + 102006091 AGCD01043730;GBCE01053119;XM_013519201 XP_013374655 MODEL 8746955 protein-coding B4galt1 beta-1,4-galactosyltransferase 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); beta-tubulin binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); angiogenesis involved in wound healing (ortholog); binding of sperm to zona pellucida (ortholog); PARTICIPATES IN galactose metabolic pathway; galactosemia pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) NW_004955472 2490649 2536053 + 102011303 AGCD01053467;AGCD01053468;AGCD01053469;AGCD01053470;AGCD01053471;GBCE01026609;XM_005401108;XM_013522991;XM_013522992;XM_013522993;XM_013522994;XM_013522995 XP_005401165;XP_013378445;XP_013378446;XP_013378447;XP_013378448;XP_013378449 MODEL 39131676 rrna 5S_rRNA 5S ribosomal RNA 8903440 protein-coding As3mt arsenite methyltransferase ENCODES a protein that exhibits arsenite methyltransferase activity (ortholog); INVOLVED IN arsonoacetate metabolic process (ortholog); methylation (ortholog); response to arsenic-containing substance (ortholog); PARTICIPATES IN homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); Birth Weight (ortholog); FOUND IN cytosol (ortholog) NW_004955485 7576627 7599005 - 102009063 AGCD01058663;GBCE01032783;GBCE01032789;XM_005403818;XM_005403819 XP_005403875;XP_005403876 MODEL 8880453 protein-coding LOC102006209 uncharacterized LOC102006209 NW_004955406 38742352 38743020 + 102006209 AGCD01006609;XM_005375478 XP_005375535 MODEL 8994409 protein-coding LOC102023042 chromosome unknown open reading frame, human C1orf74 ASSOCIATED WITH hepatocellular carcinoma (ortholog); thymoma (ortholog) NW_004955489 2439927 2462748 + 102023042 AGCD01059871;GBCE01163253;XM_005404534;XM_005404535;XM_005404536;XM_005404537 XP_005404591;XP_005404592;XP_005404593;XP_005404594 MODEL 8841338 ncrna LOC102005164 uncharacterized LOC102005164 NW_004955432 18505196 18551305 - 102005164 AGCD01031143;AGCD01031144;AGCD01031145;AGCD01031146;AGCD01031147;GBDF01151735;XR_261533 MODEL 8805749 protein-coding Bet1 Bet1 golgi vesicular membrane trafficking protein INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); vesicle fusion with Golgi apparatus (ortholog); ASSOCIATED WITH congenital muscular dystrophy with rapid progression (ortholog); COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955432 10762973 10774744 - 102011573 AGCD01030936;GBDF01048008;XM_005388040 XP_005388097 MODEL 10162726 protein-coding LOC106150031 translation initiation factor IF-2-like NW_004955461 4786578 4786856 - 106150031 AGCD01048875;GBBH01162760;GBCE01152258;XM_013521327 XP_013376781 MODEL 8781748 protein-coding Serpinb2 serpin family B member 2 PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); colon adenocarcinoma (ortholog); FOUND IN cornified envelope (ortholog) NW_004955402 47707182 47720688 + 102026493 AGCD01001192;GBBH01024006;XM_005373036 XP_005373093 MODEL 8758854 protein-coding Psme1 proteasome activator subunit 1 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN proteasome complex (ortholog) NW_004955409 36262114 36264996 - 102008384 AGCD01010454;GBCB01003421;XM_005377033;XM_013510409 XP_005377090;XP_013365863 MODEL 8755020 pseudo LOC102021335 interferon alpha-4-like NW_004955472 12915361 12916194 + 102021335 AGCD01053825 MODEL 39132649 rrna 5S_rRNA 5S ribosomal RNA 8881973 ncrna LOC102010746 uncharacterized LOC102010746 NW_004955446 646029 647588 + 102010746 AGCD01039946;GBDF01235337;XR_262363 MODEL 8846351 pseudo LOC102007318 ubiquitin-conjugating enzyme E2 L3 pseudogene NW_004955412 10793664 10794367 - 102007318 AGCD01012785;XM_005378041;XM_005378042 MODEL 8837595 pseudo LOC102017996 40S ribosomal protein S15 pseudogene NW_004955423 7792117 7792604 - 102017996 AGCD01023611 MODEL 8994895 ncrna LOC102007675 uncharacterized LOC102007675 NW_004955425 7720216 7730019 + 102007675 AGCD01025391;AGCD01025392;GBDK01047433;XR_261136 MODEL 8798963 protein-coding LOC102003032 uncharacterized LOC102003032 NW_004955421 8414832 8416723 + 102003032 AGCD01021811;GBDF01288165;XM_005383920 XP_005383977 MODEL 8918901 pseudo LOC102008810 dnaJ homolog subfamily B member 6-like NW_004955403 27722644 27770774 - 102008810 AGCD01002323;AGCD01002324;AGCD01002325;AGCD01002326 MODEL 8865512 pseudo LOC102004812 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955416 26864290 26864700 - 102004812 AGCD01017606 MODEL 8865643 protein-coding LOC102011918 extensin-like NW_004955559 469599 475119 + 102011918 AGCD01073586;AGCD01073587;GBDF01008163;XM_005412762;XM_005412763;XM_013508926;XR_001232336 XP_005412819;XP_005412820;XP_013364380 MODEL 39131499 protein-coding PLAC9 placenta associated 9 8777261 protein-coding Gk2 glycerol kinase 2 INVOLVED IN flagellated sperm motility (ortholog); sperm mitochondrial sheath assembly (ortholog); spermatogenesis (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); sperm midpiece (ortholog) NW_004955433 3736428 3738360 - 102024040 AGCD01031433;GBDF01008264;XM_005388216 XP_005388273 MODEL 10347517 protein-coding LOC106147089 receptor-type tyrosine-protein phosphatase gamma-like NW_004955517 3563925 3619511 - 106147089 AGCD01067659;AGCD01067660;AGCD01067661;AGCD01067662;AGCD01067663;GBDF01090397;XM_013506947 XP_013362401 MODEL 39131677 rrna 5S_rRNA 5S ribosomal RNA 8885884 protein-coding Hmgb1 high mobility group box 1 ENCODES a protein that exhibits 5S rRNA binding (ortholog); bent DNA binding (ortholog); C-X-C chemokine binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of innate immune response (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN cisplatin drug pathway; mismatch repair pathway; pro-inflammatory cytokine mediated pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN alphav-beta3 integrin-HMGB1 complex (ortholog); cell surface (ortholog); chromatin (ortholog) NW_004955431 15373207 15377339 + 102021697 AGCD01030361;GBCC01001539;GBDI01016404;XM_005387745 XP_005387802 MODEL 8779241 protein-coding Fhad1 forkhead associated phosphopeptide binding domain 1 INVOLVED IN apoptotic process (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955527 2756630 2879135 - 102014281 AGCD01069466;AGCD01069467;AGCD01069468;AGCD01069469;GBBH01127202;GBDI01262100;XM_013507414 XP_013362868 MODEL 8731492 protein-coding B4galt2 beta-1,4-galactosyltransferase 2 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); lactose synthase activity (ortholog); N-acetyllactosamine synthase activity (ortholog); INVOLVED IN brain development (ortholog); cerebellar Purkinje cell layer development (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955537 3506836 3516436 + 102012578 AGCD01070960;GBBH01172270;XM_005410710;XM_013507782 XP_005410767;XP_013363236 MODEL 8916076 protein-coding LOC102012303 NADH-cytochrome b5 reductase 3 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); INVOLVED IN nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955413 27971140 27979905 - 102012303 AGCD01014539;GBCB01020264;GBDI01016413;XM_013511507 XP_013366961 MODEL 8796878 ncrna LOC102013440 uncharacterized LOC102013440 NW_004955514 2930944 2934018 - 102013440 AGCD01067090;GBDF01225338;XR_264504 MODEL 8754987 protein-coding Golt1b golgi transport 1B INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); protein-containing complex (ortholog) NW_004955413 17150261 17164108 + 102017757 AGCD01014130;GBCQ01176080;XM_005379060 XP_005379117 MODEL 39133447 snorna SNORD96A Small nucleolar RNA SNORD96 family 8778706 pseudo LOC102024433 sodium/myo-inositol cotransporter-like NW_004955409 5273472 5274818 + 102024433 AGCD01009311 MODEL 8943519 protein-coding CUNH10orf53 chromosome unknown C10orf53 homolog ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955556 625327 640289 - 102028025 AGCD01073178;GBBH01141531;XM_005412566 XP_005412623 MODEL 8911051 trna trnC(gca) tRNA-Cys MT 5191 5257 - 15822223 8871078 protein-coding Bet1l Bet1 golgi vesicular membrane trafficking protein like ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN regulation of retrograde vesicle-mediated transport, Golgi to ER (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); endometrial adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955476 11833595 11836411 + 102003233 AGCD01055475;GBDK01142903;XM_005401891;XM_013502918 XP_005401948;XP_013358372 MODEL 8749193 protein-coding Hdac7 histone deacetylase 7 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN cell-cell junction assembly (ortholog); cellular response to mechanical stimulus (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; hypoxia inducible factor pathway; ASSOCIATED WITH alopecia areata (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955500 6692656 6707453 - 102018001 AGCD01063891;GBDK01016156;XM_005406612;XM_005406616 XP_005406669;XP_005406673 MODEL 8905333 ncrna LOC102021336 uncharacterized LOC102021336 NW_004955415 19026977 19033625 - 102021336 AGCD01016460;GBDF01278713;XR_260302 MODEL 39132654 rrna 5S_rRNA 5S ribosomal RNA 10218799 ncrna LOC106150032 uncharacterized LOC106150032 NW_004955461 8986832 8989194 + 106150032 AGCD01048940;GBDF01075737;XR_001236570 MODEL 8846397 protein-coding Ints2 integrator complex subunit 2 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955451 2822081 2876117 - 102010115 AGCD01043023;AGCD01043024;GBDJ01299082;XM_005393971 XP_005394028 MODEL 9034808 protein-coding Fam20c FAM20C golgi associated secretory pathway kinase ENCODES a protein that exhibits calcium ion binding (ortholog); manganese ion binding (ortholog); protease binding (ortholog); INVOLVED IN biomineral tissue development (ortholog); dentinogenesis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955460 8142325 8192044 + 102017962 AGCD01048512;AGCD01048513;GBCE01000872;GBCQ01040449;XM_005397963 XP_005398020 MODEL 39134152 misc_rna 7SK 7SK RNA 39133703 mirna MIR802 microRNA 802 10162643 pseudo LOC106149241 prostaglandin E synthase 3-like NW_004955441 292719 293479 - 106149241 AGCD01036699 MODEL 9008872 protein-coding Kiaa0513 KIAA0513 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955541 437106 476131 + 102016197 AGCD01071352;GBDF01280306;XM_005410968;XM_005410969 XP_005411025;XP_005411026 MODEL 9010354 protein-coding Cxcl14 C-X-C motif chemokine ligand 14 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); inner ear development (ortholog); negative regulation of myoblast differentiation (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955408 30733079 30740854 - 102009914 AGCD01008815;GBCE01002150;XM_005376477 XP_005376534 MODEL 8712270 ncrna LOC102023395 uncharacterized LOC102023395 NW_004955437 3132934 3153018 - 102023395 AGCD01034298;AGCD01034299;GBDI01326354;XR_001235053 MODEL 8960373 pseudo LOC102005166 cactin pseudogene NW_004955433 1837660 1843410 - 102005166 AGCD01031371 MODEL 8753426 pseudo LOC102009960 guanylate-binding protein 6-like NW_004955423 4772863 4789903 + 102009960 AGCD01023545 MODEL 8891533 protein-coding LOC102013443 pancreatic alpha-amylase NW_004955435 8083712 8090769 - 102013443 AGCD01032994;GBDF01171554;XM_005388816;XM_005388817;XM_005388818 XP_005388873;XP_005388874;XP_005388875 MODEL 8769604 protein-coding Psme2 proteasome activator subunit 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN proteasome complex (ortholog) NW_004955409 36252847 36257021 + 102009919 AGCD01010454;GBDF01048370;XM_005377038 XP_005377095 MODEL 8934940 protein-coding LOC102022673 claudin-3 NW_004955456 13999561 14000545 + 102022673 AGCD01046631;GBDF01144954;GBDJ01020813;XM_005396764 XP_005396821 MODEL 8828936 protein-coding Washc4 WASH complex subunit 4 INVOLVED IN cognition (ortholog); endolysosomal toll-like receptor signaling pathway (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 43 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN BLOC-1 complex (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955405 39451423 39499295 + 102016230 AGCD01005500;AGCD01005501;GBDF01188550;XM_005374605 XP_005374662 MODEL 8750991 pseudo LOC102007677 40S ribosomal protein S3a pseudogene NW_004955426 13259846 13261749 + 102007677 AGCD01026360 MODEL 8793980 protein-coding Ndc1 NDC1 transmembrane nucleoporin ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN homologous chromosome pairing at meiosis (ortholog); nuclear pore complex assembly (ortholog); nuclear pore localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); cleft palate (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955464 5424710 5476657 + 102010680 AGCD01050006;AGCD01050007;AGCD01050008;AGCD01050009;GBDF01085204;XM_005398557 XP_005398614 MODEL 8852130 ncrna LOC102025106 uncharacterized LOC102025106 NW_004955413 19310741 19316830 + 102025106 AGCD01014198;XR_260088 MODEL 9057733 protein-coding LOC102005856 cytochrome P450 3A9-like NW_004955573 976002 1018678 - 102005856 AGCD01075011;AGCD01075012;AGCD01075013;GBCQ01036396;XM_005413764;XM_013509445 XP_005413821;XP_013364899 MODEL 8717278 pseudo LOC102011922 protein kinase C iota type pseudogene NW_004955446 1525926 1528371 + 102011922 AGCD01039967;XM_005392599 MODEL 9036894 ncrna LOC102008813 uncharacterized LOC102008813 NW_004955452 14619352 14627007 - 102008813 AGCD01044473;GBDF01305185;XR_262691 MODEL 8882764 pseudo LOC102006212 adenosine deaminase-like protein pseudogene NW_004955407 20334537 20335032 - 102006212 AGCD01007327 MODEL 8868211 protein-coding LOC102023047 chromosome unknown open reading frame, human C11orf68 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955422 19409368 19410742 + 102023047 AGCD01023006;GBDF01003352;GBDJ01088971;XM_013514329 XP_013369783 MODEL 9050113 protein-coding Gk5 glycerol kinase 5 ENCODES a protein that exhibits glycerol kinase activity (ortholog); INVOLVED IN glycerol-3-phosphate biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955508 3596482 3637582 + 102028444 AGCD01065819;AGCD01065820;AGCD01065821;AGCD01065822;GBCQ01175897;GBDI01386886;XM_013506263 XP_013361717 MODEL 39132475 snrna U6 U6 spliceosomal RNA 8814108 protein-coding Ddias DNA damage induced apoptosis suppressor INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to gamma radiation (ortholog); cellular response to hydroperoxide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955414 9607338 9636941 - 102030296 AGCD01015029;AGCD01015030;AGCD01015031;GBDF01015330;XM_013512024 XP_013367478 MODEL 8913958 protein-coding Fam210a family with sequence similarity 210 member A ENCODES a protein that exhibits metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); mitochondrial inner membrane fusion (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955402 344191 367851 + 102006183 AGCD01000017;GBDF01003400;XM_005372546;XM_005372547;XM_005372548 XP_005372603;XP_005372604;XP_005372605 MODEL 9064300 ncrna LOC102007320 uncharacterized LOC102007320 NW_004955413 65629 71480 + 102007320 AGCD01013436;XR_260039 MODEL 8855358 protein-coding Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN cellular response to X-ray (ortholog); chromatin organization (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955406 41412855 41448551 - 102011838 AGCD01006681;AGCD01006682;AGCD01006683;AGCD01006684;GBCE01054514;XM_005375369;XM_005375370 XP_005375426;XP_005375427 MODEL 8810527 pseudo LOC102012305 60S ribosomal protein L26-like 1 pseudogene NW_004955468 11168153 11174462 - 102012305 AGCD01052119 MODEL 8834269 protein-coding LOC102003403 formin-like protein 1 NW_004955451 16903163 16906378 - 102003403 AGCD01043711;GBDF01002809;XM_005394500;XM_005394501;XM_013519234 XP_005394557;XP_005394558;XP_013374688 MODEL 8865107 pseudo LOC102017997 RING finger and CHY zinc finger domain-containing protein 1 pseudogene NW_004955495 7385816 7387491 - 102017997 AGCD01062132 MODEL 8850776 protein-coding LOC102010748 transmembrane protease serine 11G-like NW_004955447 4856552 4890901 + 102010748 AGCD01040735;GBDF01305458;XM_005392830 XP_005392887 MODEL 8935695 protein-coding Gon4l gon-4 like ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955545 1990202 2054614 - 102007701 AGCD01071878;AGCD01071879;AGCD01071880;AGCD01071881;AGCD01071882;GBDF01128223;XM_005411606;XM_005411607;XM_005411609;XM_013508237 XP_005411663;XP_005411664;XP_005411666;XP_013363691 MODEL 9009386 pseudo LOC102005168 uncharacterized LOC102005168 NW_004955434 10798324 10816183 - 102005168 AGCD01032363;AGCD01032364;AGCD01032365 MODEL 8967409 protein-coding Cxcl16 C-X-C motif chemokine ligand 16 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); positive regulation of cell growth (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog) NW_004955467 10132461 10136649 - 102010242 AGCD01051546;GBBH01064209;XM_013522132 XP_013377586 MODEL 8781685 ncrna LOC102021338 uncharacterized LOC102021338 NW_004955478 2711040 2718852 + 102021338 AGCD01055802;GBDF01209257;XR_001230835;XR_263687 MODEL 39132274 rrna 5S_rRNA 5S ribosomal RNA 9064500 protein-coding Hdac8 histone deacetylase 8 ENCODES a protein that exhibits chromatin binding (ortholog); deacetylase activity (ortholog); histone deacetylase activity (ortholog); INVOLVED IN cellular response to forskolin (ortholog); cellular response to trichostatin A (ortholog); mitotic sister chromatid cohesion (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Apnea (ortholog); Arachnoid Cysts (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955475 11748502 12012884 - 102014041 AGCD01055169;AGCD01055170;AGCD01055171;AGCD01055172;AGCD01055173;AGCD01055174;AGCD01055175;AGCD01055176;AGCD01055177;GBDI01054107;XM_005401688 XP_005401745 MODEL 8924426 ncrna LOC102003404 uncharacterized LOC102003404 NW_004955404 18428351 18441554 + 102003404 AGCD01003616;GBDF01251601;XR_259317 MODEL 8876743 protein-coding Asah1 N-acylsphingosine amidohydrolase 1 ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); ceramide catabolic process (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arthralgia (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955552 1623263 1660285 + 102020292 AGCD01072780;AGCD01072781;AGCD01072782;AGCD01072783;AGCD01072784;GBBH01090438;XM_005412192 XP_005412249 MODEL 39131678 rrna 5S_rRNA 5S ribosomal RNA 9040946 ncrna LOC102007678 uncharacterized LOC102007678 NW_004955427 4628626 4654041 - 102007678 AGCD01026970;AGCD01026971;GBDF01253448;XR_261233 MODEL 9002035 protein-coding Hmgb2 high mobility group box 2 ENCODES a protein that exhibits chemoattractant activity (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell chemotaxis (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); condensed chromosome (ortholog) NW_004955403 33656314 33659115 + 102025423 AGCD01002458;AGCD01002459;GBDF01002195;XM_005373541 XP_005373598 MODEL 8978840 protein-coding Fhdc1 FH2 domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN cilium assembly (ortholog); Golgi ribbon formation (ortholog); stress fiber assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); FOUND IN cilium (ortholog); cytoplasmic microtubule (ortholog); Golgi apparatus (ortholog) NW_004955471 7368086 7399431 + 102024000 AGCD01053147;AGCD01053148;GBBH01164761;GBDI01261606;XM_013522903 XP_013378357 MODEL 39134465 misc_rna 7SK 7SK RNA 39133737 snorna SNORD97 small nucleolar RNA, C/D box 97 8791048 protein-coding LOC102008817 C4b-binding protein alpha chain-like NW_004955406 42709359 42715864 + 102008817 AGCD01006714;GBBH01192869;XM_005375486 XP_005375543 MODEL 8947781 protein-coding LOC102023050 zinc finger protein 709-like NW_004955494 8410747 8423126 - 102023050 AGCD01061584;GBDF01210638;XM_005405519;XM_005405520 XP_005405576;XP_005405577 MODEL 39132478 snrna U6 U6 spliceosomal RNA 9056905 protein-coding CUNH10orf62 chromosome unknown C10orf62 homolog NW_004955507 3691334 3692636 + 102028664 AGCD01065632;GBDK01273929;XM_005407615 XP_005407672 MODEL 8888669 trna trnD(gtc) tRNA-Asp MT 6950 7017 + 15822226 8877913 ncrna LOC102009962 uncharacterized LOC102009962 NW_004955423 22423709 22437613 + 102009962 AGCD01023966;GBDF01176631;XR_260987 MODEL 9004389 protein-coding Ddit3 DNA damage inducible transcript 3 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); apoptotic process (ortholog); artery development (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); Acute-Phase Reaction (ortholog); FOUND IN CHOP-ATF3 complex (ortholog); CHOP-ATF4 complex (ortholog); CHOP-C/EBP complex (ortholog) NW_004955458 5232979 5238513 - 102003212 AGCD01047470;GBDF01053797;XM_005397386 XP_005397443 MODEL 9029502 protein-coding Plac9 placenta associated 9 ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955437 13100613 13113555 + 102015764 AGCD01034646;GBDJ01176640;XM_005389884;XM_013517119;XM_013517120;XM_013517121 XP_005389941;XP_013372573;XP_013372574;XP_013372575 MODEL 10336146 ncrna LOC106147090 uncharacterized LOC106147090 NW_004955517 3738386 3760814 + 106147090 AGCD01067676;AGCD01067677;AGCD01067678;AGCD01067679;AGCD01067680;GBDF01155331;XR_001231825 MODEL 8731168 protein-coding LOC102022676 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 NW_004955408 21612072 21613637 + 102022676 AGCD01008555;AGCD01008556;GBDF01123451;XM_013507629 XP_013363083 MODEL 8968450 protein-coding Psme3 proteasome activator subunit 3 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); identical protein binding (ortholog); MDM2/MDM4 family protein binding (ortholog); INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 16631379 16637331 + 102023658 AGCD01043696;AGCD01043697;GBDF01008333;XM_005394477;XM_005394479 XP_005394534;XP_005394536 MODEL 9013517 protein-coding Cxcl17 C-X-C motif chemokine ligand 17 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); INVOLVED IN cell migration (ortholog); chemokine-mediated signaling pathway (ortholog); leukocyte chemotaxis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular region (ortholog) NW_004955555 495437 509788 + 102020166 AGCD01073034;AGCD01073035;GBBH01002398;XM_005412354 XP_005412411 MODEL 8910656 protein-coding Ndc80 NDC80 kinetochore complex component ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); kinetochore adaptor activity (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); attachment of spindle microtubules to kinetochore (ortholog); centrosome duplication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); kinetochore (ortholog) NW_004955402 7692009 7728876 - 102019220 AGCD01000181;AGCD01000182;GBDK01305956;XM_005372664 XP_005372721 MODEL 8794673 protein-coding LOC102011927 uncharacterized LOC102011927 NW_004955450 3259515 3262466 + 102011927 AGCD01042426;GBDF01042694;XM_005393550 XP_005393607 MODEL 39132278 rrna 5S_rRNA 5S ribosomal RNA 39133649 mirna MIR873 microRNA 873 9023783 protein-coding Serpinb5 serpin family B member 5 INVOLVED IN extracellular matrix organization (ortholog); morphogenesis of an epithelium (ortholog); prostate gland morphogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); Colonic Neoplasms (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cornified envelope (ortholog) NW_004955402 47248665 47276017 + 102023762 AGCD01001178;GBBH01168613;XM_005373029;XM_013511236;XM_013511239;XM_013511244 XP_005373086;XP_013366690;XP_013366693;XP_013366698 MODEL 8721235 protein-coding Mtrex Mtr4 exosome RNA helicase ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); RNA helicase activity (ortholog); INVOLVED IN DNA damage response (ortholog); maturation of 5.8S rRNA (ortholog); RNA catabolic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); exosome (RNase complex) (ortholog); nuclear exosome (RNase complex) (ortholog) NW_004955446 12270338 12362064 - 102017719 AGCD01040228;AGCD01040229;AGCD01040230;GBBH01026395;XM_005392698;XM_005392699;XM_005392700 XP_005392755;XP_005392756;XP_005392757 MODEL 39131679 rrna 5S_rRNA 5S ribosomal RNA 8999420 protein-coding Gkap1 G kinase anchoring protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of insulin receptor signaling pathway (ortholog); receptor guanylyl cyclase signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955432 3459100 3532889 + 102009974 AGCD01030664;AGCD01030665;AGCD01030666;AGCD01030667;AGCD01030668;GBCE01016799;XM_005387958;XM_013515998 XP_005388015;XP_013371452 MODEL 8755780 pseudo LOC102023396 cyclin-G1 pseudogene NW_004955536 1334545 1336528 + 102023396 AGCD01070756 MODEL 8763485 protein-coding G6pd glucose-6-phosphate dehydrogenase ENCODES a protein that exhibits carbohydrate binding (ortholog); D-glucose binding (ortholog); glucose-6-phosphate dehydrogenase activity (ortholog); INVOLVED IN angiotensin-mediated vasoconstriction involved in regulation of systemic arterial blood pressure (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH acute kidney failure (ortholog); ALAD-Deficiency Porphyria (ortholog); allergic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955580 1045294 1058129 - 102007954 AGCD01075642;AGCD01075643;GBBH01033999;GBCB01098390;XM_005414217;XM_005414218;XM_005414219 XP_005414274;XP_005414275;XP_005414276 MODEL 8911435 protein-coding Crybg2 crystallin beta-gamma domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955452 5720756 5747259 - 102016878 AGCD01044052;GBBH01135316;XM_005394854;XM_005394855;XM_005394856;XM_013519623;XM_013519624 XP_005394911;XP_005394912;XP_005394913;XP_013375077;XP_013375078 MODEL 8929837 protein-coding Hmgb3 high mobility group box 3 ENCODES a protein that exhibits DNA binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of B cell differentiation (ortholog); negative regulation of myeloid cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955498 6633540 6640393 + 102004496 AGCD01063121;AGCD01063122;GBCB01120270;XM_005406428;XM_005406429;XM_005406430 XP_005406485;XP_005406486;XP_005406487 MODEL 8960938 protein-coding Bex2 brain expressed X-linked 2 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); INVOLVED IN axon development (ortholog); axon regeneration (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955548 439061 505418 - 102023748 AGCD01072332;AGCD01072333;GBCE01172021;XM_005411981;XM_005411982;XM_005411984;XM_005411985;XM_013508531 XP_005412038;XP_005412039;XP_005412041;XP_005412042;XP_013363985 MODEL 10112153 ncrna LOC106150033 uncharacterized LOC106150033 NW_004955461 9108773 9114933 + 106150033 AGCD01048940;AGCD01048941;GBDF01209602;XR_001236571;XR_001236572 MODEL 8821738 protein-coding Gon7 GON7 subunit of KEOPS complex INVOLVED IN tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 9 (ortholog); FOUND IN EKC/KEOPS complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955438 15319033 15321648 - 102004120 AGCD01035365;GBBH01060839;XM_005390343 XP_005390400 MODEL 8783182 protein-coding Washc5 WASH complex subunit 5 INVOLVED IN endosomal transport (ortholog); lysosome organization (ortholog); meiotic spindle assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955461 145993 199274 - 102028387 AGCD01048791;AGCD01048792;GBCB01089643;XM_005397982;XM_005397983;XM_005397985;XM_013521306;XM_013521307 XP_005398039;XP_005398040;XP_005398042;XP_013376760;XP_013376761 MODEL 39134153 misc_rna 7SK 7SK RNA 8913903 protein-coding B4galt3 beta-1,4-galactosyltransferase 3 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); galactosyltransferase activity (ortholog); N-acetyllactosamine synthase activity (ortholog); INVOLVED IN glucosylceramide metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955468 12934521 12945435 - 102004919 AGCD01052193;GBDF01248735;XM_005400263;XM_013522353;XM_013522354;XM_013522355 XP_005400320;XP_013377807;XP_013377808;XP_013377809 MODEL 8914309 protein-coding Ints3 integrator complex subunit 3 INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955545 352170 394751 + 102019851 AGCD01071790;GBDF01007991;XM_005411440 XP_005411497 MODEL 8702771 protein-coding Hdac9 histone deacetylase 9 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase activity (ortholog); histone deacetylase activity, hydrolytic mechanism (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cholesterol homeostasis (ortholog); determination of adult lifespan (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Auriculocondylar Syndrome 4 (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleus (ortholog) NW_004955410 21046312 21932029 + 102025552 AGCD01011056;AGCD01011057;AGCD01011058;AGCD01011059;AGCD01011060;AGCD01011061;AGCD01011062;AGCD01011063;AGCD01011064;AGCD01011065;AGCD01011066;GBDF01088540;XM_005377344;XM_005377345;XM_005377349;XM_005377350;XM_005377351;XM_013510571 XP_005377401;XP_005377402;XP_005377406;XP_005377407;XP_005377408;XP_013366025 MODEL 8711710 protein-coding Mypop Myb related transcription factor, partner of profilin ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955574 316188 325288 - 102023541 AGCD01075098;GBDF01125819;XM_005413821;XM_013509574;XM_013509575 XP_005413878;XP_013365028;XP_013365029 MODEL 8914011 protein-coding LOC102007321 uncharacterized LOC102007321 NW_004955413 2702114 2703313 - 102007321 AGCD01013558;GBCB01123825;XM_005378745;XM_005378746 XP_005378802;XP_005378803 MODEL 8797418 pseudo LOC102004813 40S ribosomal protein S2-like NW_004955416 5201588 5210682 + 102004813 AGCD01016904 MODEL 8725546 protein-coding LOC102013444 vomeronasal type-2 receptor 116-like NW_004955524 3567737 3596413 + 102013444 AGCD01068907;AGCD01068908;AGCD01068909;AGCD01068910;AGCD01068911;AGCD01068912;AGCD01068913;GBDF01116192;XM_005409711 XP_005409768 MODEL 8808123 protein-coding LOC102010752 olfactory receptor 10V1-like NW_004955580 1278611 1279549 + 102010752 AGCD01075652;GBBH01028735;XM_005414226 XP_005414283 MODEL 8751996 protein-coding Serpinb7 serpin family B member 7 INVOLVED IN positive regulation of collagen biosynthetic process (ortholog); positive regulation of glomerular mesangial cell proliferation (ortholog); positive regulation of platelet-derived growth factor production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Diabetic Nephropathies (ortholog) NW_004955402 47599503 47649537 + 102025961 AGCD01001191;AGCD01001192;GBCC01008982;XM_005373035;XM_013511256 XP_005373092;XP_013366710 MODEL 39132479 snrna U6 U6 spliceosomal RNA 8985873 protein-coding LOC102025110 taste receptor type 2 member 14-like NW_004955413 8203676 8204596 - 102025110 AGCD01013854;XM_005379632 XP_005379689 MODEL 8835106 protein-coding LOC102003033 HRAS-like suppressor 3 NW_004955422 21415634 21440465 + 102003033 AGCD01023116;GBDK01181579;XM_005384673;XM_013514096;XM_013514097 XP_005384730;XP_013369550;XP_013369551 MODEL 10214239 pseudo LOC106149242 E3 ubiquitin-protein ligase RNF125 pseudogene NW_004955441 6936381 6938677 + 106149242 AGCD01036945 MODEL 8869535 protein-coding LOC102009964 vegetative cell wall protein gp1-like NW_004955495 4922998 4925566 + 102009964 AGCD01061964;GBCQ01088688;XM_005406155 XP_005406212 MODEL 9032618 pseudo LOC102021342 60S ribosomal protein L7 pseudogene NW_004955416 31233424 31238297 + 102021342 AGCD01017729 MODEL 8853106 protein-coding LOC102023400 zinc finger protein 45 NW_004955555 1583300 1616003 + 102023400 AGCD01073091;AGCD01073092;GBCE01005260;XM_005412463;XM_005412464;XM_005412465;XM_005412466;XM_005412467;XM_005412470;XM_013508736;XM_013508737;XM_013508738;XM_013508739;XM_013508740;XM_013508741;XM_013508742 XP_005412520;XP_005412521;XP_005412522;XP_005412523;XP_005412524;XP_005412527;XP_013364190;XP_013364191;XP_013364192;XP_013364193;XP_013364194;XP_013364195;XP_013364196 MODEL 8783306 ncrna LOC102003405 uncharacterized LOC102003405 NW_004955452 4390516 4398593 - 102003405 AGCD01043981;GBDK01434065;XR_262649 MODEL 8978865 pseudo LOC102024436 40S ribosomal protein S25 pseudogene NW_004955463 6739320 6740084 + 102024436 AGCD01049695 MODEL 8912504 protein-coding Kiaa0586 KIAA0586 ortholog INVOLVED IN cilium assembly (ortholog); regulation of establishment of protein localization (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); photoreceptor inner segment (ortholog) NW_004955466 12125559 12240991 + 102005127 AGCD01051113;AGCD01051114;AGCD01051115;GBDF01053235;XM_005399217;XM_013521975;XM_013521976 XP_005399274;XP_013377429;XP_013377430 MODEL 39134154 misc_rna 7SK 7SK RNA 39132936 snorna SNORD98 small nucleolar RNA, C/D box 98 39133728 mirna MIR874 microRNA 874 8885512 ncrna LOC102008818 uncharacterized LOC102008818 NW_004955407 17028813 17032767 - 102008818 AGCD01007235;GBCB01103543;XR_259562 MODEL 8827231 pseudo LOC102012309 RAC-gamma serine/threonine-protein kinase-like NW_004955414 21907536 21908908 - 102012309 AGCD01015437 MODEL 8988645 ncrna LOC102023055 uncharacterized LOC102023055 NW_004955426 24038441 24060641 + 102023055 AGCD01026665;GBDF01111157;XR_001234309;XR_261219 MODEL 9010182 trna trnE(ttc) tRNA-Glu MT 14092 14160 - 15822214 8767657 pseudo LOC102005858 40S ribosomal protein S4-like NW_004955575 415119 417705 + 102005858 AGCD01075221 MODEL 8950630 ncrna LOC102005172 uncharacterized LOC102005172 NW_004955436 16334399 16358588 + 102005172 AGCD01033914;AGCD01033915;GBDK01148627;XR_001234980 MODEL 8968002 protein-coding CUNH10orf71 chromosome unknown C10orf71 homolog INVOLVED IN cardiac muscle cell contraction (ortholog); cardiac muscle cell differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN Z disc (ortholog) NW_004955556 894707 917196 - 102003387 AGCD01073179;GBCB01007197;XM_005412570;XM_005412571;XM_005412572 XP_005412627;XP_005412628;XP_005412629 MODEL 8767633 protein-coding LOC102004820 olfactory receptor 13C9 NW_004955419 21786853 21787806 + 102004820 AGCD01020283;XM_005382787 XP_005382844 MODEL 9056006 protein-coding Ddit4 DNA damage inducible transcript 4 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); leukemia (ortholog); mouth disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955437 19322407 19324562 - 102029555 AGCD01034844;GBDJ01073108;XM_005390015 XP_005390072 MODEL 8747471 pseudo LOC102006216 mitochondrial calcium uniporter regulator 1 pseudogene NW_004955408 1490717 1491878 + 102006216 AGCD01007960 MODEL 8987286 protein-coding Gaa alpha glucosidase ENCODES a protein that exhibits alpha-1,4-glucosidase activity (ortholog); alpha-glucosidase activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN aorta development (ortholog); diaphragm contraction (ortholog); glycogen catabolic process (ortholog); PARTICIPATES IN galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH anxiety disorder (ortholog); blood coagulation disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN autolysosome lumen (ortholog); lysosome (ortholog); membrane (ortholog) NW_004955506 2764959 2783231 - 102022946 AGCD01065301;GBCB01040394;XM_005407336;XR_001231590 XP_005407393 MODEL 8953982 ncrna LOC102022682 uncharacterized LOC102022682 NW_004955411 25085395 25090288 + 102022682 AGCD01012149;GBDK01264939;XR_001232798;XR_259942 MODEL 10325184 ncrna LOC106147091 uncharacterized LOC106147091 NW_004955518 1027892 1038741 - 106147091 AGCD01067755;GBBH01168264;XR_001231831 MODEL 9023297 protein-coding Asah2 N-acylsphingosine amidohydrolase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); ceramide biosynthetic process (ortholog); ceramide catabolic process (ortholog); ASSOCIATED WITH celiac disease (ortholog); hepatocellular carcinoma (ortholog); liver disease (ortholog); FOUND IN caveola (ortholog); extracellular exosome (ortholog); extracellular region (ortholog) NW_004955425 5840355 5931891 + 102003466 AGCD01025357;AGCD01025358;AGCD01025359;GBCC01031228;XM_005385898;XM_013514922 XP_005385955;XP_013370376 MODEL 8854618 protein-coding Wasl WASP like actin nucleation promoting factor ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); dendritic spine morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atopic dermatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cap (ortholog); cell leading edge (ortholog); cytoplasm (ortholog) NW_004955479 5167851 5200512 - 102015717 AGCD01056340;GBCQ01037898;XM_005402337 XP_005402394 MODEL 8772136 protein-coding Cxcl8 C-X-C motif chemokine ligand 8 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR chemokine receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN chemokine (C-X-C motif) ligand 8 signaling pathway; mTOR signaling pathway; syndecan signaling pathway; ASSOCIATED WITH otitis media; acute asthma (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular region (ortholog); G protein-coupled receptor complex (ortholog); membrane (ortholog) NW_004955474 247326 250355 + 102003438 AGCD01054209;GBBH01138820;XM_013502794 XP_013358248 MODEL 9016101 pseudo LOC102011930 tripartite motif-containing protein 59-like NW_004955450 13491725 13492879 - 102011930 AGCD01042735 MODEL 8762462 protein-coding Nde1 nudE neurodevelopment protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN centrosome duplication (ortholog); cerebral cortex development (ortholog); chromosome localization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Familial Thoracic Aortic Aneurysm 4 (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cytoplasmic vesicle membrane (ortholog); kinetochore (ortholog) NW_004955442 495704 530296 + 102025728 AGCD01037426;GBBH01077769;XM_005391075;XM_005391076;XM_005391077;XM_005391078;XM_013517843;XM_013517844 XP_005391132;XP_005391133;XP_005391134;XP_005391135;XP_013373297;XP_013373298 MODEL 8941932 protein-coding Fhip1a FHF complex subunit HOOK interacting protein 1A INVOLVED IN protein localization to perinuclear region of cytoplasm (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955471 5985150 6229720 + 102024555 AGCD01053116;AGCD01053117;AGCD01053118;AGCD01053119;AGCD01053120;AGCD01053121;AGCD01053122;GBCB01023762;XM_013522889;XM_013522890;XM_013522891;XM_013522892;XM_013522893 XP_013378343;XP_013378344;XP_013378345;XP_013378346;XP_013378347 MODEL 39131680 rrna 5S_rRNA 5S ribosomal RNA 8988712 protein-coding Mtrf1 mitochondrial translation release factor 1 ENCODES a protein that exhibits translation release factor activity, codon specific (ortholog); INVOLVED IN mitochondrial translational termination (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955518 4937921 4971365 + 102026034 AGCD01067846;GBCB01087419;XM_005409119;XM_005409120 XP_005409176;XP_005409177 MODEL 8721457 protein-coding LOC102022684 serpin B9-like NW_004955465 10437606 10476747 - 102022684 AGCD01050510;GBCB01089957;XM_005398917;XM_005398918;XM_005398928;XM_013521824;XM_013521825;XM_013521826;XM_013521827 XP_005398974;XP_005398975;XP_005398985;XP_013377278;XP_013377279;XP_013377280;XP_013377281 MODEL 8750984 pseudo LOC102007328 sal-like protein 4 NW_004955470 12748580 12750141 - 102007328 AGCD01052938 MODEL 8858955 protein-coding Gkn1 gastrokine 1 ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); ovarian cyst (ortholog); Stomach Neoplasms (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) NW_004955424 16046662 16051235 - 102026765 AGCD01024737;XM_013514599 XP_013370053 MODEL 39133363 snorna SNORD99 small nucleolar RNA, C/D box 99 8985070 protein-coding Bex3 brain expressed X-linked 3 ENCODES a protein that exhibits death receptor binding (ortholog); identical protein binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); glaucoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955548 526844 528406 + 102025517 AGCD01072333;GBCE01053102;XM_005411988;XM_005411989;XM_005411990;XM_005411991 XP_005412045;XP_005412046;XP_005412047;XP_005412048 MODEL 8956577 protein-coding Plag1 PLAG1 zinc finger ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gland morphogenesis (ortholog); multicellular organism growth (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cholangiocarcinoma (ortholog); genetic disease (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955454 15239042 15281669 - 102011950 AGCD01045490;GBDF01221602;XM_005396081;XM_013520253 XP_005396138;XP_013375707 MODEL 10197946 ncrna LOC106150034 uncharacterized LOC106150034 NW_004955461 1659213 1706221 + 106150034 AGCD01048819;AGCD01048820;GBDF01116645;XR_001236573 MODEL 8929206 protein-coding LOC102005859 RE1-silencing transcription factor NW_004955447 14183770 14196122 - 102005859 AGCD01040989;GBBH01193455;GBCE01108856;XM_013518551 XP_013374005 MODEL 8819818 protein-coding Gopc golgi associated PDZ and coiled-coil motif containing ENCODES a protein that exhibits frizzled binding (ortholog); GTPase regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of anion channel activity (ortholog); negative regulation of protein localization to cell surface (ortholog); spermatid nucleus differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); azoospermia (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955436 743616 777878 - 102022739 AGCD01033556;AGCD01033557;AGCD01033558;GBBH01227741;GBDF01080662;XM_013516616;XM_013516617 XP_013372070;XP_013372071 MODEL 39134466 misc_rna 7SK 7SK RNA 8802969 protein-coding Fam210b family with sequence similarity 210 member B ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); erythrocyte differentiation (ortholog); inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); systemic lupus erythematosus (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955445 2854077 2862259 - 102011919 AGCD01039369;GBDJ01189877;XM_005392277 XP_005392334 MODEL 39132280 rrna 5S_rRNA 5S ribosomal RNA 9057127 protein-coding B4galt4 beta-1,4-galactosyltransferase 4 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); N-acetyllactosamine synthase activity (ortholog); UDP-galactosyltransferase activity (ortholog); INVOLVED IN keratan sulfate proteoglycan biosynthetic process (ortholog); lactosylceramide biosynthetic process (ortholog); ASSOCIATED WITH high grade glioma (ortholog); Mesothelioma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955427 18964578 18982090 - 102016176 AGCD01027357;GBDI01354182;GBDK01395918;XM_013515223 XP_013370677 MODEL 8858849 pseudo LOC102021348 prefoldin subunit 1 pseudogene NW_004955482 4817894 4819362 - 102021348 AGCD01057311 MODEL 39134155 misc_rna 7SK 7SK RNA 8761889 protein-coding LOC102024439 prostate and testis expressed protein 3 NW_004955412 26865766 26870441 + 102024439 AGCD01013223;GBDF01193345;XM_005378472;XR_001232855;XR_001232856 XP_005378529 MODEL 8830504 protein-coding Hdc histidine decarboxylase ENCODES a protein that exhibits amino acid binding (ortholog); histidine decarboxylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN histamine biosynthetic process (ortholog); L-histidine catabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955409 4051574 4072641 + 102004567 AGCD01009272;GBDF01116811;XM_005376674 XP_005376731 MODEL 8769547 protein-coding Ints4 integrator complex subunit 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955414 13934830 14053648 + 102006762 AGCD01015131;AGCD01015132;AGCD01015133;AGCD01015134;AGCD01015135;AGCD01015136;AGCD01015137;AGCD01015138;AGCD01015139;AGCD01015140;AGCD01015141;GBDF01123228;XM_005379824;XM_005379825 XP_005379881;XP_005379882 MODEL 8821092 protein-coding Hmgb4 high mobility group box 4 FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955452 12013304 12014058 + 102009141 AGCD01044345;GBDF01010338;XM_005395115 XP_005395172 MODEL 8774529 protein-coding Crybg3 crystallin beta-gamma domain containing 3 ENCODES a protein that exhibits protein kinase A binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955407 203315 329017 - 102010769 AGCD01006733;AGCD01006734;AGCD01006735;AGCD01006736;GBDF01052893;XM_005375490;XM_013503474 XP_005375547;XP_013358928 MODEL 39132480 snrna U6 U6 spliceosomal RNA 8877918 protein-coding LOC102010753 putative uncharacterized protein ZNRD1-AS1 NW_004955583 186389 190965 - 102010753 AGCD01075800;AGCD01075801;GBDI01025273;XM_013509840 XP_013365294 MODEL 10355205 protein-coding LOC106149243 uncharacterized LOC106149243 NW_004955441 13676224 13697566 + 106149243 AGCD01037157;AGCD01037158;GBCB01069548;XM_013517517 XP_013372971 MODEL 8756688 pseudo LOC102003038 splicing factor 3B subunit 4 pseudogene NW_004955424 14377491 14379086 - 102003038 AGCD01024652 MODEL 9056834 protein-coding LOC102025111 T-cell ecto-ADP-ribosyltransferase 1-like NW_004955414 18887480 18897593 - 102025111 AGCD01015292;GBDJ01402723;XM_005379987 XP_005380044 MODEL 8982933 protein-coding LOC102007680 olfactory receptor 13A1-like NW_004955507 6487198 6488139 - 102007680 AGCD01065718;XM_005407725 XP_005407782 MODEL 8705696 protein-coding LOC102004828 olfactory receptor 2A12 NW_004955491 418194 419126 + 102004828 AGCD01060334;XM_005404724 XP_005404781 MODEL 8963878 protein-coding LOC102005173 trace amine-associated receptor 2 NW_004955436 13191916 13192815 - 102005173 AGCD01033855;XM_005415330 XP_005415387 MODEL 8768708 pseudo LOC102023402 60 kDa heat shock protein, mitochondrial pseudogene NW_004955561 2077130 2078369 - 102023402 AGCD01073870;XR_265012 MODEL 8992610 pseudo LOC102018000 DCN1-like protein 4 NW_004955424 950236 952921 + 102018000 AGCD01024225 MODEL 9032813 protein-coding LOC102003410 DNA fragmentation factor subunit alpha-like NW_004955454 12312169 12320100 + 102003410 AGCD01045408;GBDF01264302;XM_005396061 XP_005396118 MODEL 8723944 pseudo LOC102005865 transcription factor BTF3 homolog 4 pseudogene NW_004955588 220604 221041 + 102005865 AGCD01076095 MODEL 8720197 protein-coding Psme3ip1 proteasome activator subunit 3 interacting protein 1 INVOLVED IN negative regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955433 14813688 14843446 - 102023627 AGCD01031729;AGCD01031730;GBCB01023782;XM_005388378;XM_005388379;XM_005388380;XM_005388381;XM_005388383;XM_013516131 XP_005388435;XP_005388436;XP_005388437;XP_005388438;XP_005388440;XP_013371585 MODEL 8754077 protein-coding Myrf myelin regulatory factor ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN central nervous system myelin maintenance (ortholog); central nervous system myelination (ortholog); oligodendrocyte development (ortholog); ASSOCIATED WITH Ascites (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); nucleus (ortholog) NW_004955511 5927103 5949289 - 102011349 AGCD01066592;AGCD01066593;GBDJ01176890;GBDK01130308;XM_013506435;XM_013506436;XM_013506437;XM_013506438 XP_013361889;XP_013361890;XP_013361891;XP_013361892 MODEL 39132283 rrna 5S_rRNA 5S ribosomal RNA 8920635 protein-coding Nucleolin nucleolin multifunctional protein ENCODES a protein that exhibits calcium ion binding (ortholog); DNA topoisomerase binding (ortholog); ErbB-4 class receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); chromosome (ortholog) NW_004955453 4154627 4164253 + 102021084 AGCD01044681;AGCD01044682;GBDF01051740;XM_005395394;XM_013519931 XP_005395451;XP_013375385 MODEL 8706654 protein-coding Ndel1 nudE neurodevelopment protein 1 like 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); canonical Wnt signaling pathway (ortholog); cell migration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); cell body (ortholog) NW_004955467 8432806 8486563 - 102015823 AGCD01051450;AGCD01051451;GBCB01002091;XM_005399403;XM_005399405;XM_005399406;XM_005399407;XM_013522099 XP_005399460;XP_005399462;XP_005399463;XP_005399464;XP_013377553 MODEL 8881560 ncrna LOC102023059 uncharacterized LOC102023059 NW_004955429 15249622 15251278 + 102023059 AGCD01028799;XR_261334 MODEL 8961807 protein-coding Cxcl9 C-X-C motif chemokine ligand 9 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemotaxis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955433 724566 731945 - 102009209 AGCD01031335;GBDK01027907;XM_005388165 XP_005388222 MODEL 8710174 pseudo LOC102024440 elongation factor 1-alpha 1 pseudogene NW_004955466 13847858 13849554 + 102024440 AGCD01051188;XR_263320 MODEL 8811856 trna trnF(gaa) tRNA-Phe MT 1 66 + 15822237 8704306 pseudo LOC102007330 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955414 4403610 4404427 - 102007330 AGCD01014865 MODEL 9044312 protein-coding LOC102008819 glutathione S-transferase theta-4-like NW_004955455 8339972 8366449 - 102008819 AGCD01045887;AGCD01045888;GBBH01060604;XM_005396410;XM_005396411;XM_005396412;XM_013520443 XP_005396467;XP_005396468;XP_005396469;XP_013375897 MODEL 8929991 pseudo LOC102009965 high mobility group nucleosome-binding domain-containing protein 3 pseudogene NW_004955497 1469748 1473082 - 102009965 AGCD01062462;XM_005406365 MODEL 8704858 protein-coding Serpinb8 serpin family B member 8 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN epithelial cell-cell adhesion (ortholog); negative regulation of endopeptidase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955402 47761900 47781281 + 102026819 AGCD01001193;GBDJ01355314;XM_005373037;XM_005373038;XM_005373039;XM_013511271 XP_005373094;XP_005373095;XP_005373096;XP_013366725 MODEL 8959579 protein-coding CUNH10orf88 chromosome unknown C10orf88 homolog ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955477 1127067 1141360 - 102024111 AGCD01055503;GBDI01055762;XM_005401951 XP_005402008 MODEL 8729417 protein-coding Kiaa0753 KIAA0753 ortholog INVOLVED IN cilium assembly (ortholog); cytosolic ciliogenesis (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) NW_004955467 12074413 12144672 - 102006760 AGCD01051625;GBDJ01018170;XM_013522135;XM_013522136;XM_013522137;XM_013522138;XM_013522140 XP_013377589;XP_013377590;XP_013377591;XP_013377592;XP_013377594 MODEL 10208033 ncrna LOC106150035 uncharacterized LOC106150035 NW_004955406 19775774 19777754 - 106150035 AGCD01006089;XR_001236586 MODEL 39131589 mirna MIR876 microRNA 876 8706460 protein-coding Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of dendritic spine development (ortholog); positive regulation of membrane tubulation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cell projection membrane (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955461 4813228 5083548 - 102007744 AGCD01048875;AGCD01048876;GBDF01249602;GBDK01182284;XM_013521324 XP_013376778 MODEL 39134156 misc_rna 7SK 7SK RNA 8861943 protein-coding Mtrf1l mitochondrial translation release factor 1 like ENCODES a protein that exhibits translation release factor activity (ortholog); translation release factor activity, codon specific (ortholog); INVOLVED IN mitochondrial translational termination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955439 8809545 8824442 + 102026353 AGCD01035813;GBDJ01420447;XM_005390569;XM_013517410 XP_005390626;XP_013372864 MODEL 8805108 protein-coding Fhip1b FHF complex subunit HOOK interacting protein 1B INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN FHF complex (ortholog) NW_004955414 21954103 21977877 - 102015503 AGCD01015438;GBBH01102313;XM_005380117;XM_005380119;XM_005380121;XM_013512031 XP_005380174;XP_005380176;XP_005380178;XP_013367485 MODEL 8993255 pseudo LOC102006218 attractin pseudogene NW_004955458 8263305 8377868 - 102006218 AGCD01047602;AGCD01047603;AGCD01047604 MODEL 8959533 protein-coding LOC102023060 olfactory receptor 4A47-like NW_004955511 92806 93715 - 102023060 AGCD01066319;XM_013506408 XP_013361862 MODEL 8846430 pseudo LOC102010757 28S ribosomal protein S36, mitochondrial pseudogene NW_004955402 51239421 51239728 - 102010757 AGCD01001297 MODEL 10321395 protein-coding LOC106149244 uncharacterized LOC106149244 NW_004955441 14979326 14987199 + 106149244 AGCD01037236;AGCD01037237;GBDK01254120;XM_013517519 XP_013372973 MODEL 10376168 ncrna LOC106147092 uncharacterized LOC106147092 NW_004955518 4747515 4749907 + 106147092 AGCD01067837;GBDJ01211909;XR_001231832 MODEL 8945454 protein-coding Wbp1 WW domain binding protein 1 ENCODES a protein that exhibits WW domain binding (ortholog) NW_004955424 11321393 11323651 - 102027420 AGCD01024562;GBCB01039025;XM_005385504;XM_005385505 XP_005385561;XP_005385562 MODEL 8774820 protein-coding LOC102025112 olfactory receptor 51T1 NW_004955414 20490013 20494165 + 102025112 AGCD01015376;XM_005380474 XP_005380531 MODEL 8757332 protein-coding Gorab golgin, RAB6 interacting ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN hair follicle morphogenesis (ortholog); non-motile cilium assembly (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH cutis laxa (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955462 6807618 6824296 + 102006321 AGCD01049289;GBDI01026297;XM_005398171 XP_005398228 MODEL 9021859 protein-coding LOC102004831 olfactory receptor 4B1-like NW_004955422 329742 330700 + 102004831 AGCD01022404;XM_005384935 XP_005384992 MODEL 8956603 ncrna LOC102013451 uncharacterized LOC102013451 NW_004955547 654544 658859 - 102013451 AGCD01072171;GBDK01382015;XR_001232230;XR_264899 MODEL 8891865 protein-coding Hddc2 HD domain containing 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog) NW_004955436 6675892 6694086 - 102029553 AGCD01033691;AGCD01033692;GBDF01090317;XM_005389156 XP_005389213 MODEL 39131681 rrna 5S_rRNA 5S ribosomal RNA 8973084 protein-coding LOC102011936 nuclear pore complex protein Nup50-like NW_004955801 1035 19256 - 102011936 AGCD01078375;GBDK01393605;XM_005415113;XM_013510195;XM_013510196 XP_005415170;XP_013365649;XP_013365650 MODEL 8710322 pseudo LOC102003411 nuclease-sensitive element-binding protein 1 pseudogene NW_004955454 11898396 11903297 + 102003411 AGCD01045401;AGCD01045402;XR_262803 MODEL 8859708 ncrna LOC102023403 uncharacterized LOC102023403 NW_004955444 15501192 15502267 - 102023403 AGCD01039136;GBDF01064198;XR_262274 MODEL 8930748 protein-coding LOC102022685 putative olfactory receptor 10D4 NW_004955412 24755548 24756486 + 102022685 AGCD01013125;XM_013510992 XP_013366446 MODEL 39133682 mirna MIR9-1 microRNA 9-1 39133596 snorna snoZ196 Small nucleolar RNA Z196/R39/R59 family 39131447 protein-coding CRYGC crystallin gamma C 8770946 protein-coding Psme4 proteasome activator subunit 4 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955441 19586567 19663335 - 102004326 AGCD01037356;AGCD01037357;AGCD01037358;GBCE01134980;GBDJ01020753;XM_013517590 XP_013373044 MODEL 8714201 protein-coding Myrfl myelin regulatory factor like NW_004955405 10107312 10218739 + 102018559 AGCD01004808;GBDI01321645;XM_013519404 XP_013374858 MODEL 8803642 protein-coding Bfar bifunctional apoptosis regulator ENCODES a protein that exhibits caspase binding (ortholog); protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of IRE1-mediated unfolded protein response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955442 4229236 4255623 - 102016103 AGCD01037524;AGCD01037525;GBBH01140244;XM_005391133 XP_005391190 MODEL 8906872 protein-coding Ddit4l DNA damage inducible transcript 4 like ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955496 7618731 7622180 + 102003154 AGCD01062383;GBDJ01422210;XM_005406287 XP_005406344 MODEL 8969136 protein-coding Ndfip1 Nedd4 family interacting protein 1 ENCODES a protein that exhibits WW domain binding (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of interleukin-4 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Hereditary Neoplastic Syndromes (ortholog); melanoma (ortholog); FOUND IN cell cortex (ortholog); endosome membrane (ortholog); extracellular region (ortholog) NW_004955415 11643846 11666131 - 102028293 AGCD01016168;GBBH01000930;XM_013512124 XP_013367578 MODEL 39132482 snrna U6 U6 spliceosomal RNA 9035971 protein-coding Plagl1 PLAG1 like zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear body (ortholog) NW_004955436 16452797 16511872 + 102005503 AGCD01033919;AGCD01033920;GBBH01224118;XM_013516703 XP_013372157 MODEL 8949314 ncrna LOC102007332 uncharacterized LOC102007332 NW_004955474 9962827 10021859 - 102007332 AGCD01054580;AGCD01054581;AGCD01054582;AGCD01054583;AGCD01054584;GBDF01078385;XR_001230747 MODEL 8987220 protein-coding Mtrfr mitochondrial translation release factor in rescue ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); tRNA binding (ortholog); INVOLVED IN rescue of stalled mitochondrial ribosome (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 7 (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 55 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955482 5594148 5606508 - 102022292 AGCD01057343;GBDF01192317;XM_005403053;XM_013503568;XR_263834 XP_005403110;XP_013359022 MODEL 8846914 protein-coding LOC102003039 zinc finger protein 14-like NW_004955499 300856 321376 + 102003039 AGCD01063215;AGCD01063216;AGCD01063217;AGCD01063218;GBDI01054273;XM_013505563;XM_013505564;XM_013505565;XM_013505566 XP_013361017;XP_013361018;XP_013361019;XP_013361020 MODEL 39134467 misc_rna 7SK 7SK RNA 9026840 protein-coding LOC102007682 olfactory receptor 5M3 NW_004955511 1640219 1641157 - 102007682 AGCD01066377;XM_005407968 XP_005408025 MODEL 9026467 protein-coding LOC102009968 translation initiation factor IF-2-like NW_004955426 21666851 21667753 - 102009968 AGCD01026595;XM_005386266 XP_005386323 MODEL 9045988 protein-coding LOC102012311 olfactory receptor 480-like NW_004955414 23617985 23618923 - 102012311 AGCD01015506;XM_005380205 XP_005380262 MODEL 8894373 protein-coding B4galt5 beta-1,4-galactosyltransferase 5 ENCODES a protein that exhibits N-acetyllactosamine synthase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); ganglioside biosynthetic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955445 8471684 8559672 + 102004759 AGCD01039595;AGCD01039596;AGCD01039597;AGCD01039598;AGCD01039599;AGCD01039600;AGCD01039601;AGCD01039602;AGCD01039603;GBBH01033957;XM_005392328;XM_013518294;XM_013518295 XP_005392385;XP_013373748;XP_013373749 MODEL 8970101 protein-coding Serpinc1 serpin family C member 1 ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); lactation (ortholog); response to nutrient (ortholog); PARTICIPATES IN coagulation cascade pathway; enoxaparin pharmacodynamics pathway; fondaparinux pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 14024183 14036206 - 102008913 AGCD01005956;GBDK01194209;XM_005374876 XP_005374933 MODEL 8834951 protein-coding LOC102021350 histone H3 NW_004955483 969514 970652 - 102021350 AGCD01057638;GBDF01240962;XM_013503791 XP_013359245 MODEL 39132286 rrna 5S_rRNA 5S ribosomal RNA 8873755 protein-coding Kiaa0825 KIAA0825 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog) NW_004955418 17818641 18203402 + 102017877 AGCD01019158;AGCD01019159;AGCD01019160;AGCD01019161;AGCD01019162;AGCD01019163;AGCD01019164;AGCD01019165;GBBH01015832;XM_005382250;XM_005382253;XM_005382254;XM_005382255;XM_005382256;XM_005382257;XM_005382258;XM_013512985 XP_005382307;XP_005382310;XP_005382311;XP_005382312;XP_005382313;XP_005382314;XP_005382315;XP_013368439 MODEL 9040015 protein-coding Asap2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955487 4994901 5133751 + 102021883 AGCD01059321;AGCD01059322;GBCE01009597;GBDF01221269;XM_013504338 XP_013359792 MODEL 9068248 protein-coding Nudc nuclear distribution C, dynein complex regulator INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic spindle organization (ortholog); nuclear migration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Lynch syndrome (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); mitotic spindle (ortholog) NW_004955452 6261500 6278393 + 102025754 AGCD01044099;AGCD01044100;GBCQ01117442;XM_005394887;XM_013519684 XP_005394944;XP_013375138 MODEL 8810910 ncrna LOC102022688 uncharacterized LOC102022688 NW_004955413 29141607 29153942 + 102022688 AGCD01014577;AGCD01014578;GBDJ01336894;XR_260122 MODEL 8891709 protein-coding Hddc3 HD domain containing 3 NW_004955416 14993492 14995818 - 102020802 AGCD01017295;GBDF01082302;XM_005381526 XP_005381583 MODEL 8768678 protein-coding Ints5 integrator complex subunit 5 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH melanoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) NW_004955599 551989 556341 + 102021504 AGCD01076659;GBDJ01144296;XM_005414805 XP_005414862 MODEL 10095887 protein-coding LOC102008821 uncharacterized LOC102008821 NW_004955455 6620069 6624760 + 102008821 AGCD01045802;XM_013520311 XP_013375765 MODEL 8784131 ncrna LOC102005180 uncharacterized LOC102005180 NW_004955540 2515392 2519809 + 102005180 AGCD01071321;GBDF01244999;XR_264826 MODEL 8887064 protein-coding LOC102010758 vomeronasal type-1 receptor 3-like NW_004955603 530648 531616 + 102010758 AGCD01076850;XM_005414847 XP_005414904 MODEL 8737414 ncrna LOC102018002 uncharacterized LOC102018002 NW_004955425 14697359 14703469 + 102018002 AGCD01025567;GBDF01279132;XR_261143 MODEL 8872828 protein-coding Plagl2 PLAG1 like zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chylomicron assembly (ortholog); lipid metabolic process (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955422 28839021 28847255 + 102010704 AGCD01023372;GBCB01076356;GBDI01219915;XM_005384877 XP_005384934 MODEL 10146066 protein-coding LOC106147093 proline-rich protein HaeIII subfamily 1-like NW_004955518 150076 161371 - 106147093 AGCD01067719;GBDF01083958;GBDF01083959;XM_013506950 XP_013362404 MODEL 8835822 ncrna LOC102025114 uncharacterized LOC102025114 NW_004955415 29659897 29684279 - 102025114 AGCD01016654;GBCE01080812;XR_001233189;XR_001233190;XR_260322 MODEL 8781916 ncrna LOC102004832 uncharacterized LOC102004832 NW_004955495 4237269 4239443 - 102004832 AGCD01061905;XR_264150 MODEL 8783750 protein-coding Gkn2 gastrokine 2 INVOLVED IN gene expression (ortholog); inflammatory response (ortholog); neutrophil activation involved in immune response (ortholog); FOUND IN basal part of cell (ortholog) NW_004955424 16071246 16078008 + 102018109 AGCD01024737;XM_005385654 XP_005385711 MODEL 8753777 protein-coding Gorasp1 golgi reassembly stacking protein 1 INVOLVED IN establishment of protein localization to plasma membrane (ortholog); Golgi organization (ortholog); Golgi ribbon formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); Golgi apparatus (ortholog) NW_004955427 24862253 24873710 + 102027553 AGCD01027524;AGCD01027525;GBDF01050822;XM_005386568;XM_013515076;XM_013515077 XP_005386625;XP_013370530;XP_013370531 MODEL 9004045 protein-coding Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase ENCODES a protein that exhibits carboxylic acid binding (ortholog); fatty-acyl-CoA binding (ortholog); hydroxymethylglutaryl-CoA lyase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); ketone body biosynthetic process (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-hydroxy-3-methylglutaryl-CoA lyase deficiency (ortholog); amino acid metabolic disorder (ortholog); anemia (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) NW_004955452 3720103 3734730 - 102018794 AGCD01043936;GBDF01155386;XM_005394773;XM_005394774 XP_005394830;XP_005394831 MODEL 8790647 pseudo LOC102013453 gamma-aminobutyric acid receptor-associated protein pseudogene NW_004955442 14455390 14458901 - 102013453 AGCD01037821 MODEL 8817338 ncrna LOC102012320 uncharacterized LOC102012320 NW_004955416 18878338 18879499 - 102012320 AGCD01017411;GBDF01086604;XR_260394 MODEL 8855044 trna trnG(tcc) tRNA-Gly MT 9396 9464 + 15822209 9035385 protein-coding Cxcr1 C-X-C motif chemokine receptor 1 ENCODES a protein that exhibits interleukin-8 binding (ortholog); interleukin-8 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); interleukin-8-mediated signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); cerebrotendinous xanthomatosis (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN G protein-coupled receptor complex (ortholog) NW_004955453 15181027 15196224 + 102015802 AGCD01044886;GBDF01195511;XM_005395665;XM_013519957;XM_013519958;XM_013519959 XP_005395722;XP_013375411;XP_013375412;XP_013375413 MODEL 8860018 protein-coding Gab1 GRB2 associated binding protein 1 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); endothelial cell chemotaxis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 26 (ortholog); cerebral palsy (ortholog); Edema (ortholog); FOUND IN cell cortex (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955471 61580 191175 - 102007987 AGCD01052949;AGCD01052950;GBBH01078019;GBCE01008269;XM_005400849;XM_005400850;XM_005400851;XM_005400852 XP_005400906;XP_005400907;XP_005400908;XP_005400909 MODEL 8771331 ncrna LOC102003412 uncharacterized LOC102003412 NW_004955407 34652125 34732104 - 102003412 AGCD01007724;AGCD01007725;GBDF01014151;XR_001231192;XR_259607 MODEL 9065582 ncrna LOC102006219 uncharacterized LOC102006219 NW_004955409 9811332 9815400 - 102006219 AGCD01009449;GBDF01214479;XR_259763 MODEL 8726064 protein-coding Bfsp1 beaded filament structural protein 1 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN cell maturation (ortholog); intermediate filament organization (ortholog); lens fiber cell development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cataract 33 (ortholog); coloboma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intermediate filament (ortholog) NW_004955415 26507381 26535545 - 102009495 AGCD01016596;AGCD01016597;AGCD01016598;GBCE01168540;XM_005380906;XM_013512110 XP_005380963;XP_013367564 MODEL 39132483 snrna U6 U6 spliceosomal RNA 8719517 protein-coding LOC102023061 uncharacterized LOC102023061 NW_004955513 3164898 3174163 + 102023061 AGCD01066896;GBDF01158696;XM_005408461 XP_005408518 MODEL 8733138 protein-coding Fam216a family with sequence similarity 216 member A ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955482 7384031 7396341 + 102021347 AGCD01057464;AGCD01057465;AGCD01057466;GBDF01002658;XM_005403144;XM_005403145;XM_005403146;XM_005403147;XM_005403148;XM_005403149 XP_005403201;XP_005403202;XP_005403203;XP_005403204;XP_005403205;XP_005403206 MODEL 8814179 protein-coding LOC102005867 protein S100-A8 ASSOCIATED WITH Acute Otitis Media NW_004955592 72594 73659 + 102005867 AGCD01076300;GBBH01004217;XM_005414602;XM_013509975 XP_005414659;XP_013365429 MODEL 8717665 protein-coding Wbp11 WW domain binding protein 11 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); WW domain binding (ortholog); INVOLVED IN RNA splicing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); bicuspid aortic valve disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955413 11533303 11549067 - 102028846 AGCD01013964;GBCQ01067517;XM_005379004;XM_005379005;XM_013511645 XP_005379061;XP_005379062;XP_013367099 MODEL 8839096 protein-coding Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ENCODES a protein that exhibits [methionine synthase] reductase (NADPH) activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); folic acid metabolic process (ortholog); L-homocysteine catabolic process (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytosol (ortholog) NW_004955504 5412290 5435409 + 102017896 AGCD01064898;GBDF01308281;XM_005407073;XM_013505893 XP_005407130;XP_013361347 MODEL 8973463 ncrna LOC102021351 uncharacterized LOC102021351 NW_004955485 4631152 4633682 - 102021351 AGCD01058572;GBDF01010932;XR_263905 MODEL 9041349 ncrna LOC102023404 uncharacterized LOC102023404 NW_004955567 888493 891286 - 102023404 AGCD01074444;AGCD01074445;GBDF01085445;XR_265027 MODEL 39131319 protein-coding CRYGN crystallin gamma N 39131349 protein-coding DDN dendrin 8936991 protein-coding Snph syntaphilin INVOLVED IN neuron differentiation (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); mitochondrial membrane (ortholog) NW_004955596 489174 531226 + 102013129 AGCD01076519;AGCD01076520;AGCD01076521;GBDF01288084;XM_005414698;XM_005414699;XM_013510013;XM_013510015;XM_013510016;XM_013510017;XM_013510018 XP_005414755;XP_005414756;XP_013365467;XP_013365469;XP_013365470;XP_013365471;XP_013365472 MODEL 8774773 protein-coding Nudcd1 NudC domain containing 1 ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955417 16688629 16750427 - 102023032 AGCD01018272;AGCD01018273;GBDJ01315147;XM_005381879;XM_005381880 XP_005381936;XP_005381937 MODEL 8823540 pseudo LOC102022691 protein kinase C iota type-like NW_004955471 4564598 4595032 + 102022691 AGCD01053080;AGCD01053081;AGCD01053082;AGCD01053083 MODEL 8914938 protein-coding Myrip myosin VIIA and Rab interacting protein ENCODES a protein that exhibits actin binding (ortholog); myosin binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN positive regulation of insulin secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); cytoplasm (ortholog) NW_004955420 29542479 29697646 - 102014574 AGCD01021509;AGCD01021510;AGCD01021511;AGCD01021512;AGCD01021513;AGCD01021514;AGCD01021515;AGCD01021516;GBDF01076923;XM_005383581;XM_013513586 XP_005383638;XP_013369040 MODEL 9003969 protein-coding LOC102012322 galectin-5-like NW_004955481 5560268 5566976 - 102012322 AGCD01056994;AGCD01056995;GBDK01183989;XM_005402780 XP_005402837 MODEL 8928020 protein-coding CUNH10orf90 chromosome unknown C10orf90 homolog ENCODES a protein that exhibits histone deacetylase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955477 4299277 4510702 - 102012090 AGCD01055581;AGCD01055582;AGCD01055583;AGCD01055584;GBCQ01114390;XM_005402005;XM_013503016;XM_013503017;XM_013503018;XM_013503019 XP_005402062;XP_013358470;XP_013358471;XP_013358472;XP_013358473 MODEL 8716593 protein-coding Hdgf heparin binding growth factor ENCODES a protein that exhibits actin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); heparin binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); negative regulation of neuron apoptotic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleoplasm (ortholog) NW_004955545 2819960 2831197 - 102009108 AGCD01071923;AGCD01071924;GBDI01008805;XM_005411700;XM_005411701 XP_005411757;XP_005411758 MODEL 10114083 pseudo LOC106149245 tRNA-splicing ligase RtcB homolog pseudogene NW_004955441 15064198 15070035 + 106149245 AGCD01037241 MODEL 39134468 misc_rna 7SK 7SK RNA 10390703 ncrna LOC106150036 uncharacterized LOC106150036 NW_004955406 20000843 20002443 - 106150036 AGCD01006095;GBDF01145012;XR_001236588 MODEL 9023469 pseudo LOC102008823 UDP-glucuronosyltransferase 1-8 pseudogene NW_004955407 23170169 23171410 + 102008823 AGCD01007415 MODEL 39131682 rrna 5S_rRNA 5S ribosomal RNA 39132484 snrna U6 U6 spliceosomal RNA 8910867 ncrna LOC102024442 uncharacterized LOC102024442 NW_004955413 29320976 29322513 + 102024442 AGCD01014580;GBDF01002331;XR_260124 MODEL 39134157 misc_rna 7SK 7SK RNA 8810629 protein-coding B4galt6 beta-1,4-galactosyltransferase 6 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); ganglioside biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); Familial Prostate Cancer (ortholog) NW_004955402 18945013 19024132 - 102018666 AGCD01000543;AGCD01000544;GBCE01061577;GBCE01087318;XM_005372744;XM_013507100;XM_013507170;XM_013507213;XM_013507247 XP_005372801;XP_013362554;XP_013362624;XP_013362667;XP_013362701 MODEL 8960607 ncrna LOC102011937 uncharacterized LOC102011937 NW_004955403 40009315 40019121 + 102011937 AGCD01002656;AGCD01002657;GBDF01192639;XR_259230 MODEL 8856090 protein-coding Plat plasminogen activator, tissue type ENCODES a protein that exhibits phosphoprotein binding (ortholog); serine-type endopeptidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to luteinizing hormone stimulus (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute promyelocytic leukemia (ortholog); Acute Traumatic Coagulopathy (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955536 730962 754333 + 102009758 AGCD01070737;GBCQ01003427;XM_005410511 XP_005410568 MODEL 8820553 protein-coding Fhip2a FHF complex subunit HOOK interacting protein 2A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955431 19751575 19780905 + 102018757 AGCD01030455;GBBH01186995;GBCE01153442;XM_013515880 XP_013371334 MODEL 8835872 protein-coding Gla galactosidase alpha ENCODES a protein that exhibits alpha-galactosidase activity (ortholog); catalytic activity (ortholog); galactoside binding (ortholog); INVOLVED IN aorta development (ortholog); glycosphingolipid catabolic process (ortholog); glycosylceramide catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH angiokeratoma (ortholog); cardiomyopathy (ortholog); Fabry disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955503 7526077 7535817 - 102026892 AGCD01064795;GBDK01072048;XM_005406953 XP_005407010 MODEL 8938233 protein-coding Asap3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of GTPase activity (ortholog); regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN focal adhesion (ortholog); ruffle (ortholog) NW_004955452 3437240 3480472 - 102015686 AGCD01043926;GBDI01128510;XM_005394763;XM_013519524 XP_005394820;XP_013374978 MODEL 8980780 protein-coding Ndfip2 Nedd4 family interacting protein 2 ENCODES a protein that exhibits WW domain binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endosome membrane (ortholog) NW_004955404 27981215 28051238 - 102007850 AGCD01003941;AGCD01003942;AGCD01003943;AGCD01003944;GBCB01021606;XM_005374124 XP_005374181 MODEL 9018792 protein-coding Ints6 integrator complex subunit 6 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN protein localization to chromatin (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); INTAC complex (ortholog) NW_004955431 4728011 4810236 - 102013324 AGCD01030007;AGCD01030008;AGCD01030009;AGCD01030010;AGCD01030011;GBBH01107233;GBCQ01151782;XM_013515760 XP_013371214 MODEL 8731628 pseudo LOC102018003 ubiquitin-conjugating enzyme E2 C pseudogene NW_004955500 8246022 8246543 - 102018003 AGCD01063985 MODEL 8966399 ncrna LOC102005183 uncharacterized LOC102005183 NW_004955439 1843897 1881335 + 102005183 AGCD01035628;GBDF01100877;XR_001235170;XR_001235171;XR_261965;XR_261966 MODEL 9019974 protein-coding Hdgfl1 HDGF like 1 NW_004955483 4215060 4217150 - 102013507 AGCD01057734;GBDF01009191;XM_005403378 XP_005403435 MODEL 39132288 rrna 5S_rRNA 5S ribosomal RNA 10370157 pseudo LOC106147094 protein kinase C iota type pseudogene NW_004955518 2690856 2692589 + 106147094 AGCD01067783 MODEL 8843523 protein-coding LOC102025115 heat shock factor protein 3-like NW_004955475 5498275 5555299 - 102025115 AGCD01054919;AGCD01054920;AGCD01054921;GBDF01165225;XM_013502808 XP_013358262 MODEL 9027735 pseudo LOC102008826 creatine kinase U-type, mitochondrial-like NW_004955409 22945071 22950655 + 102008826 AGCD01010048 MODEL 8806386 protein-coding LOC102004834 uncharacterized LOC102004834 NW_004955426 391229 395014 + 102004834 AGCD01026001;GBDF01177168;XM_005386119;XM_005386120;XR_001234323 XP_005386176;XP_005386177 MODEL 8888554 protein-coding Kiaa0930 KIAA0930 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog) NW_004955413 29622818 29654493 - 102028403 AGCD01014588;GBCE01054386;GBDF01002364;XM_005379479 XP_005379536 MODEL 9015898 protein-coding Serpind1 serpin family D member 1 ASSOCIATED WITH carotid artery thrombosis (ortholog); disease by infectious agent (ortholog); heparin cofactor II deficiency (ortholog) NW_004955442 19525411 19537986 - 102025297 AGCD01038066;AGCD01081646;GBDK01094174;XM_005391835 XP_005391892 MODEL 8717228 protein-coding Psmf1 proteasome inhibitor subunit 1 ENCODES a protein that exhibits proteasome binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of proteasomal protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955596 381080 414307 + 102011068 AGCD01076517;GBDF01007515;XM_005414689 XP_005414746 MODEL 626189216 mirna MIR9-2 microRNA 9-2 8983600 trna trnH(gtg) tRNA-His MT 11549 11617 + 15822212 8855067 pseudo LOC102003415 keratinocyte-associated protein 2-like NW_004955457 11849410 11853825 + 102003415 AGCD01046988 MODEL 9018002 protein-coding Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA lyase activity (ortholog); INVOLVED IN ketone body biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955411 760660 881415 + 102007417 AGCD01011466;AGCD01011467;AGCD01011468;GBCB01075178;XM_013510905;XM_013510906;XM_013510907;XM_013510908 XP_013366359;XP_013366360;XP_013366361;XP_013366362 MODEL 8776868 pseudo LOC102003040 peptidyl-prolyl cis-trans isomerase FKBP1A pseudogene NW_004955424 23204844 23205245 + 102003040 AGCD01025009 MODEL 9066207 protein-coding Cxcr3 C-X-C motif chemokine receptor 3 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955475 11148928 11152313 - 102010362 AGCD01055143;GBDI01290732;XM_005401676 XP_005401733 MODEL 8795014 pseudo LOC102023406 kinesin-like protein KIF20B pseudogene NW_004955568 1555117 1559011 - 102023406 AGCD01074547 MODEL 9040182 protein-coding Gab2 GRB2 associated binding protein 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cell migration (ortholog); integrin-mediated signaling pathway (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH chronic myeloid leukemia (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955414 13640713 13754401 + 102004373 AGCD01015115;AGCD01015116;AGCD01015117;GBBH01158635;XM_013512021 XP_013367475 MODEL 9056275 protein-coding LOC102007683 olfactory receptor 10AG1-like NW_004955511 725892 726854 - 102007683 AGCD01066341;XM_005408209 XP_005408266 MODEL 8780641 protein-coding Nudcd2 NudC domain containing 2 FOUND IN microtubule cytoskeleton (ortholog); mitotic spindle (ortholog) NW_004955408 16858635 16864617 - 102005671 AGCD01008448;GBCE01153559;XM_005376283 XP_005376340 MODEL 8764131 protein-coding Bfsp2 beaded filament structural protein 2 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN cell maturation (ortholog); cytoskeleton organization (ortholog); intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 12 multiple types (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog); plasma membrane (ortholog) NW_004955501 5083456 5145256 - 102030332 AGCD01064150;AGCD01064151;AGCD01064152;GBCE01061604;XM_005406819 XP_005406876 MODEL 9048585 ncrna LOC102010759 uncharacterized LOC102010759 NW_004955403 1971342 1976194 - 102010759 AGCD01001728;GBDF01124321;XR_259134 MODEL 8976566 protein-coding Fam216b family with sequence similarity 216 member B ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955518 676141 695316 + 102027221 AGCD01067743;AGCD01067744;XM_005415322 XP_005415379 MODEL 9013428 protein-coding Mysm1 Myb like, SWIRM and MPN domains 1 ENCODES a protein that exhibits histone binding (ortholog); histone H2A deubiquitinase activity (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); pigmentation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bone Marrow Failure Syndrome 4 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955464 1185184 1226709 + 102016358 AGCD01049946;GBBH01114348;XM_005398489;XM_013521691 XP_005398546;XP_013377145 MODEL 8750352 protein-coding LOC102009970 olfactory receptor 5M10-like NW_004955511 1738489 1739436 + 102009970 AGCD01066378;XM_005407975 XP_005408032 MODEL 10279576 protein-coding LOC106149246 translation initiation factor IF-2-like NW_004955441 15070741 15075333 - 106149246 AGCD01037241;AGCD01037242;GBDK01374228;XM_013517521 XP_013372975 MODEL 8964661 pseudo LOC102005870 RING finger and transmembrane domain-containing protein 1 pseudogene NW_004955602 483146 483899 - 102005870 AGCD01076788 MODEL 8849879 protein-coding LOC102010760 retinitis pigmentosa 9 protein NW_004955617 180456 193992 - 102010760 AGCD01077272;AGCD01077273;GBCE01004432;GBCE01098928;XM_013510144 XP_013365598 MODEL 8885985 protein-coding Ints6l integrator complex subunit 6 like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955489 9192428 9224445 - 102024241 AGCD01060031;GBBH01051174;XM_013504487;XM_013504488;XM_013504489 XP_013359941;XP_013359942;XP_013359943 MODEL 8801295 ncrna LOC102013456 uncharacterized LOC102013456 NW_004955559 488549 488991 + 102013456 AGCD01073587;GBDF01109206;XR_264993 MODEL 8904727 protein-coding LOC102021360 heat shock transcription factor, Y-linked-like NW_004955494 8274458 8275841 - 102021360 AGCD01061582;GBDF01086027;XM_005405513 XP_005405570 MODEL 8974663 ncrna LOC102007340 uncharacterized LOC102007340 NW_004955482 6352713 6353828 - 102007340 AGCD01057386;GBDF01082671;XR_263836 MODEL 8968030 protein-coding B4galt7 beta-1,4-galactosyltransferase 7 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); galactosyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN glycosaminoglycan biosynthetic process (ortholog); negative regulation of fibroblast proliferation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955408 29837982 29847891 + 102005344 AGCD01008776;GBBH01142392;XM_013506598 XP_013362052 MODEL 8877474 protein-coding LOC102022692 natural cytotoxicity triggering receptor 3 ligand 1-like NW_004955414 32112006 32121958 + 102022692 AGCD01015773;AGCD01015774;GBDF01277677;XM_013512028 XP_013367482 MODEL 8914486 protein-coding Serpine1 serpin family E member 1 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to aldosterone (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; hypoxia inducible factor pathway; oxygen homeostasis pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acquired Protein C Deficiency (ortholog); Acute Lung Injury (ortholog); FOUND IN chromaffin granule (ortholog); extracellular exosome (ortholog); extracellular matrix (ortholog) NW_004955456 16147523 16157040 - 102027492 AGCD01046692;GBBH01203227;XM_005396870 XP_005396927 MODEL 8801337 protein-coding Asb1 ankyrin repeat and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN male genitalia development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); ubiquitin ligase complex (ortholog) NW_004955542 2243381 2255747 - 102015151 AGCD01071515;GBDI01256106;XM_013508013 XP_013363467 MODEL 8830555 protein-coding LOC102007346 uncharacterized LOC102007346 NW_004955491 8656799 8664951 + 102007346 AGCD01060620;GBDK01151127;XM_013504571 XP_013360025 MODEL 9061078 protein-coding Ndn necdin, MAGE family member ENCODES a protein that exhibits gamma-tubulin binding (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN axon extension (ortholog); axonal fasciculation (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); Birth Weight (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 31125354 31127010 - 102021759 AGCD01017726;GBDI01326647;XM_005381676 XP_005381733 MODEL 8927994 protein-coding Wbp1l WW domain binding protein 1 like ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); hemopoiesis (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH nevoid basal cell carcinoma syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955485 7655921 7710387 - 102011546 AGCD01058669;AGCD01058670;AGCD01058671;AGCD01058672;GBCE01054786;XM_005403823;XM_005403824;XM_013504076;XM_013504077 XP_005403880;XP_005403881;XP_013359530;XP_013359531 MODEL 8869105 pseudo LOC102022694 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955415 31723190 31724087 + 102022694 AGCD01016692;XR_260340 MODEL 8704109 protein-coding Gorasp2 golgi reassembly stacking protein 2 INVOLVED IN establishment of protein localization to plasma membrane (ortholog); gene expression (ortholog); Golgi organization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) NW_004955449 3857097 3886100 - 102022345 AGCD01041868;AGCD01041869;GBDI01078948;XM_005393241 XP_005393298 MODEL 8725804 protein-coding LOC102024443 taste receptor type 2 member 140-like NW_004955413 8151739 8152674 - 102024443 AGCD01013852;XM_005379630 XP_005379687 MODEL 39134158 misc_rna 7SK 7SK RNA 8747254 pseudo LOC102025116 phosphoglycerate kinase 2-like NW_004955416 1358051 1359301 - 102025116 AGCD01016834 MODEL 8776154 protein-coding Plau plasminogen activator, urokinase ENCODES a protein that exhibits peptidase activity (ortholog); receptor ligand activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to fluid shear stress (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN fibrinolysis pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH otitis media; Acute Lung Injury (ortholog); adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); protein complex involved in cell-matrix adhesion (ortholog) NW_004955437 17995726 18000542 - 102006955 AGCD01034771;GBBH01166562;XM_005389937 XP_005389994 MODEL 8907591 pseudo LOC102006221 evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial pseudogene NW_004955409 19008763 19009507 - 102006221 AGCD01009854 MODEL 8989929 ncrna LOC102008827 uncharacterized LOC102008827 NW_004955410 29223762 29228888 - 102008827 AGCD01011276;GBDK01225118;XR_259882 MODEL 8796283 protein-coding Fhip2b FHF complex subunit HOOK interacting protein 2B INVOLVED IN gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955403 45587970 45597700 + 102015591 AGCD01002824;GBCQ01092807;GBDF01049517;XM_013513731;XM_013513735 XP_013369185;XP_013369189 MODEL 8723662 protein-coding LOC102023062 lipocalin-15 NW_004955513 4882042 4887684 - 102023062 AGCD01066943;GBBH01057723;XM_005408552;XM_005408553;XM_013506566 XP_005408609;XP_005408610;XP_013362020 MODEL 8780981 protein-coding Psmg1 proteasome assembly chaperone 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); proteasome binding (ortholog); INVOLVED IN cerebellar granule cell precursor proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); proteasome core complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955407 37993657 38002986 - 102021520 AGCD01007792;GBDI01180160;XM_005375763;XM_005375764 XP_005375820;XP_005375821 MODEL 9049206 protein-coding Snrk SNF related kinase ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955420 27710536 27754682 - 102012099 AGCD01021458;AGCD01021459;GBBH01227690;GBDK01081580;XM_013513447;XM_013513448 XP_013368901;XP_013368902 MODEL 8953752 protein-coding Glb1 galactosidase beta 1 ENCODES a protein that exhibits beta-galactosidase activity (ortholog); galactoside binding (ortholog); hydrolase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); galactose catabolic process (ortholog); ganglioside catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH Otitis Media with Effusion; Ataxia (ortholog); atopic dermatitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955421 230957 311504 - 102016922 AGCD01021552;AGCD01021553;AGCD01021554;AGCD01021555;AGCD01021556;GBDF01080023;GBDK01129488;XM_005383635 XP_005383692 MODEL 39134469 misc_rna 7SK 7SK RNA 9038088 protein-coding LOC102007688 spermatogenesis-associated protein 31E1-like NW_004955515 2514202 2517200 - 102007688 AGCD01067256;GBDK01098218;XM_005408922;XM_013506865 XP_005408979;XP_013362319 MODEL 39132486 snrna U6 U6 spliceosomal RNA 9064074 pseudo LOC102023407 zinc finger and BTB domain-containing protein 44 pseudogene NW_004955445 3042212 3043542 + 102023407 AGCD01039378 MODEL 9003418 ncrna LOC102023063 uncharacterized LOC102023063 NW_004955432 1324294 1328134 - 102023063 AGCD01030592;GBDF01278395;XR_261499 MODEL 9021914 protein-coding Mtss1 MTSS I-BAR domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin filament polymerization (ortholog); adherens junction maintenance (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytoplasm (ortholog) NW_004955540 3204357 3346026 - 102009761 AGCD01071336;GBDF01220566;XM_005410947;XM_005410948;XM_005410950;XM_005410951;XM_005410952;XM_005410954;XM_013507913 XP_005411004;XP_005411005;XP_005411007;XP_005411008;XP_005411009;XP_005411011;XP_013363367 MODEL 39132290 rrna 5S_rRNA 5S ribosomal RNA 8896312 ncrna LOC102005186 uncharacterized LOC102005186 NW_004955553 939259 940745 - 102005186 AGCD01072866;GBDF01291522;XR_264933 MODEL 8881823 protein-coding Hdgfl2 HDGF like 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K27me3 reader activity (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); muscle cell differentiation (ortholog); positive regulation of cell growth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 4426929 4447276 - 102006928 AGCD01061922;AGCD01061923;GBDF01087580;GBDK01016904;XM_013505188;XM_013505189;XM_013505190 XP_013360642;XP_013360643;XP_013360644 MODEL 9049118 protein-coding LOC102009973 olfactory receptor 10AG1-like NW_004955511 872782 873738 - 102009973 AGCD01066345;XM_005408215 XP_005408272 MODEL 8855312 protein-coding Crygn crystallin gamma N ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955491 5780537 5788655 - 102009066 AGCD01060503;GBDI01374472;XM_013504567 XP_013360021 MODEL 10353909 ncrna LOC106149247 uncharacterized LOC106149247 NW_004955441 16088699 16098389 - 106149247 AGCD01037264;AGCD01037265;GBDF01103110;XR_001235295 MODEL 8824490 trna trnI tRNA-Ile MT 3680 3747 + 15822203 8708381 pseudo LOC102010762 RNA-binding protein 3 pseudogene NW_004955403 33567014 33567530 + 102010762 AGCD01002457 MODEL 8975013 ncrna LOC102022697 uncharacterized LOC102022697 NW_004955416 22742238 22782976 - 102022697 AGCD01017535;AGCD01017536;GBDF01075292;XR_260411 MODEL 8879320 ncrna LOC102003417 uncharacterized LOC102003417 NW_004955409 3940674 3968535 + 102003417 AGCD01009268;AGCD01009269;GBDF01016673;XR_259752 MODEL 626189189 mirna MIR9-3 microRNA 9-3 10300371 protein-coding LOC106150037 translation initiation factor IF-2-like NW_004955462 390298 391074 + 106150037 AGCD01049077;GBBH01144866;XM_013521357 XP_013376811 MODEL 8728628 ncrna LOC102025118 uncharacterized LOC102025118 NW_004955416 9380213 9382086 - 102025118 AGCD01017086;GBDK01117927;XR_001233292;XR_001233293 MODEL 39131683 rrna 5S_rRNA 5S ribosomal RNA 8758614 protein-coding Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ENCODES a protein that exhibits coenzyme A binding (ortholog); GTPase regulator activity (ortholog); hydroxymethylglutaryl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol homeostasis (ortholog); farnesyl diphosphate biosynthetic process, mevalonate pathway (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955425 25362165 25380611 - 102026024 AGCD01025915;GBDF01077743;XM_005386052 XP_005386109 MODEL 8815049 protein-coding Cxcr4 C-X-C motif chemokine receptor 4 ENCODES a protein that exhibits actin binding (ortholog); C-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); ameboidal-type cell migration (ortholog); aorta development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; hypoxia inducible factor pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bone Metastasis (ortholog); Breast Neoplasms (ortholog); FOUND IN anchoring junction (ortholog); cell leading edge (ortholog); cell surface (ortholog) NW_004955440 3456165 3460024 - 102011479 AGCD01036242;GBBH01062692;XM_005390768 XP_005390825 MODEL 8987168 protein-coding Nudcd3 NudC domain containing 3 INVOLVED IN cilium assembly (ortholog); protein localization to pericentriolar material (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic dynein complex (ortholog) NW_004955456 7558768 7645051 + 102020087 AGCD01046424;AGCD01046425;AGCD01046426;GBBH01001130;XM_005396666 XP_005396723 MODEL 8869097 protein-coding Bglap bone gamma-carboxyglutamate protein ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); hormone activity (ortholog); INVOLVED IN bone development (ortholog); brain development (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH asthma (ortholog); autosomal dominant hypocalcemia (ortholog); Bone Fractures (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955545 2381091 2382114 + 102022427 AGCD01071898;GBDJ01042544;XM_005411659 XP_005411716 MODEL 8848112 protein-coding Fam217a family with sequence similarity 217 member A ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955465 9338943 9356242 + 102010564 AGCD01050490;AGCD01050491;GBDF01190758;XM_005398884;XM_005398885;XM_005398886;XM_005398887;XM_013521835;XM_013521836 XP_005398941;XP_005398942;XP_005398943;XP_005398944;XP_013377289;XP_013377290 MODEL 9047738 protein-coding Myt1 myelin transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN diaphragm development (ortholog); endocrine pancreas development (ortholog); intracellular glucose homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955528 48198 108293 - 102021912 AGCD01069513;GBDF01241251;XM_005409901;XM_005409903 XP_005409958;XP_005409960 MODEL 8893065 ncrna LOC102011940 uncharacterized LOC102011940 NW_004955403 54668718 54673281 + 102011940 AGCD01003101;GBDF01280593;XR_001234182;XR_001234183 MODEL 8945466 protein-coding Ddn dendrin ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955500 7828759 7833397 - 102028559 AGCD01063951;AGCD01063952;GBCQ01030325;XM_013505680;XM_013505681 XP_013361134;XP_013361135 MODEL 8803453 protein-coding LOC102005873 PRAME family member 12-like NW_004955615 256153 258758 + 102005873 AGCD01077252;XM_005414985 XP_005415042 MODEL 9043099 protein-coding Wbp2 WW domain binding protein 2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); nuclear estrogen receptor binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); establishment of protein localization to chromatin (ortholog); positive regulation of intracellular estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 107 (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955506 6398411 6406970 + 102011685 AGCD01065420;GBDF01010035;XM_005407477;XM_013506054 XP_005407534;XP_013361508 MODEL 8755608 ncrna LOC102013457 uncharacterized LOC102013457 NW_004955567 1568026 1577962 + 102013457 AGCD01074483;AGCD01074484;GBDF01014518;XR_265032 MODEL 8967277 protein-coding CUNH11orf24 chromosome unknown C11orf24 homolog ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955422 17563188 17573079 + 102005153 AGCD01022926;AGCD01022927;AGCD01022928;GBBH01102136;XM_005384279;XM_013514340 XP_005384336;XP_013369794 MODEL 8827418 ncrna LOC102021362 uncharacterized LOC102021362 NW_004955423 24524994 24528461 + 102021362 AGCD01024036;GBCB01042350;XR_260993 MODEL 8967982 protein-coding LOC102003044 olfactory receptor 8K3-like NW_004955511 1368604 1369545 + 102003044 AGCD01066365;XM_005407956 XP_005408013 MODEL 8853886 protein-coding Ints7 integrator complex subunit 7 INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); INTAC complex (ortholog) NW_004955406 5299696 5371496 + 102022459 AGCD01005718;AGCD01005719;AGCD01005720;GBDF01085195;XM_005374746;XM_005374750;XM_013520176 XP_005374803;XP_005374807;XP_013375630 MODEL 8897790 protein-coding Gab3 GRB2 associated binding protein 3 INVOLVED IN blood vessel remodeling (ortholog); macrophage differentiation (ortholog); MAPK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog) NW_004955594 882921 955079 + 102003078 AGCD01076448;AGCD01076449;GBDI01243489;XM_013509986;XM_013509987;XM_013509988 XP_013365440;XP_013365441;XP_013365442 MODEL 8841331 protein-coding Crygs crystallin gamma S ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cataract (ortholog); cataract 20 multiple types (ortholog) NW_004955420 21137964 21144206 + 102005149 AGCD01021127;GBDK01040955;XM_005383275 XP_005383332 MODEL 8823826 ncrna LOC102004835 uncharacterized LOC102004835 NW_004955502 6301282 6361720 - 102004835 AGCD01064397;AGCD01064398;AGCD01064399;GBDF01305427;XR_264266 MODEL 8770272 pseudo LOC102007347 heterogeneous nuclear ribonucleoprotein A1-like 2 NW_004955494 2464464 2465407 + 102007347 AGCD01061438 MODEL 8755422 protein-coding Asb10 ankyrin repeat and SOCS box containing 10 ASSOCIATED WITH Glaucoma 1, Open Angle, F (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955491 5597623 5609086 - 102005480 AGCD01060492;GBDI01055864;XM_005404820;XM_005404821 XP_005404877;XP_005404878 MODEL 10116908 protein-coding LOC106147095 uncharacterized LOC106147095 NW_004955518 5049477 5051023 - 106147095 AGCD01067851;XM_013506954 XP_013362408 MODEL 8973032 protein-coding Psmg2 proteasome assembly chaperone 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog); protein folding chaperone complex (ortholog) NW_004955402 857228 870940 - 102011162 AGCD01000035;AGCD01000036;GBBH01004200;GBCQ01042453;XM_013513426;XM_013513470 XP_013368880;XP_013368924 MODEL 151707893 mirna MIR92A1 microRNA 92a-1 39134470 misc_rna 7SK 7SK RNA 8999790 protein-coding Ndnf neuron derived neurotrophic factor ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH endometriosis (ortholog); head and neck squamous cell carcinoma (ortholog); hypogonadism (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955428 19552493 19587712 + 102020824 AGCD01028092;GBDI01383531;XM_005386790 XP_005386847 MODEL 8951864 protein-coding Kiaa1107 KIAA1107 ortholog NW_004955423 2291192 2379556 - 102025476 AGCD01023472;GBCB01100877;XM_005385055;XM_005385056;XM_013514536;XM_013514537 XP_005385112;XP_005385113;XP_013369990;XP_013369991 MODEL 8726016 pseudo LOC102007689 DNA-3-methyladenine glycosylase pseudogene NW_004955516 1140332 1141187 + 102007689 AGCD01067413 MODEL 8965618 protein-coding LOC102023408 neutrophil gelatinase-associated lipocalin-like NW_004955570 382343 384967 - 102023408 AGCD01074723;GBDJ01109690;XM_013509381 XP_013364835 MODEL 8775433 pseudo LOC102024447 acidic leucine-rich nuclear phosphoprotein 32 family member E pseudogene NW_004955414 22245541 22246767 + 102024447 AGCD01015449 MODEL 39134471 misc_rna 7SK 7SK RNA 8854196 protein-coding Gosr1 golgi SNAP receptor complex member 1 ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955481 2831118 2876756 - 102030077 AGCD01056887;GBDK01322232;XM_005402651;XM_005402652 XP_005402708;XP_005402709 MODEL 8844984 protein-coding LOC102012324 olfactory receptor 14I1-like NW_004955418 30244034 30244983 + 102012324 AGCD01019507;XM_013512881 XP_013368335 MODEL 8909007 protein-coding B4gat1 beta-1,4-glucuronyltransferase 1 ENCODES a protein that exhibits glucuronosyltransferase activity (ortholog); N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN axon guidance (ortholog); glycoprotein biosynthetic process (ortholog); poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); congenital muscular dystrophy-dystroglycanopathy type A13 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955422 18979545 18981889 + 102012768 AGCD01022970;GBBH01026998;XM_005384408 XP_005384465 MODEL 8823120 trna trnK(ttt) tRNA-Lys MT 7704 7770 + 15822206 9004030 ncrna LOC102018004 uncharacterized LOC102018004 NW_004955426 14561873 14580787 + 102018004 AGCD01026394;GBDF01280622;XR_261196 MODEL 8747724 protein-coding Plaur plasminogen activator, urokinase receptor ENCODES a protein that exhibits cell-matrix adhesion mediator activity (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); epithelial cell differentiation involved in prostate gland development (ortholog); mesenchymal cell differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-associated liver disease (ortholog); autistic disorder (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); protein complex involved in cell-matrix adhesion (ortholog) NW_004955555 1378505 1393395 - 102017395 AGCD01073075;AGCD01073076;AGCD01073077;GBCE01155133;GBCQ01139720;XM_013508758 XP_013364212 MODEL 10395214 ncrna LOC106149248 uncharacterized LOC106149248 NW_004955441 10398589 10399687 + 106149248 AGCD01037084;XR_001235296 MODEL 10108204 protein-coding LOC106150038 uncharacterized protein C10orf68-like NW_004955462 4646881 4690098 - 106150038 AGCD01049237;AGCD01049238;AGCD01049239;GBDF01049445;XM_013521359 XP_013376813 MODEL 8888362 pseudo LOC102021363 olfactory receptor 7D4-like NW_004955495 413973 415050 + 102021363 AGCD01061628;XM_005406119 MODEL 8989355 protein-coding Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); helicase activity (ortholog); identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); ankyloglossia (ortholog); Arachnodactyly (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955470 3828943 3856059 - 102016149 AGCD01052712;GBCQ01004600;XM_005400656 XP_005400713 MODEL 8774111 protein-coding Serpine2 serpin family E member 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN blood coagulation (ortholog); cerebellar granular layer morphogenesis (ortholog); dense core granule biogenesis (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); brain edema (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955453 10049822 10076155 + 102019660 AGCD01044782;GBDF01187903;XM_005395484 XP_005395541 MODEL 39132488 snrna U6 U6 spliceosomal RNA 8731598 protein-coding Glb1l galactosidase beta 1 like ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955453 14185582 14196779 + 102017420 AGCD01044859;GBCE01171583;XM_005395569;XM_005395570 XP_005395626;XP_005395627 MODEL 39132292 rrna 5S_rRNA 5S ribosomal RNA 39134159 misc_rna 7SK 7SK RNA 8904498 ncrna LOC102006222 uncharacterized LOC102006222 NW_004955461 4118997 4141681 + 102006222 AGCD01048858;AGCD01048859;AGCD01048860;XR_263079 MODEL 8800498 protein-coding LOC102008828 uncharacterized LOC102008828 NW_004955463 7162477 7169673 + 102008828 AGCD01049720;AGCD01049721;GBDF01056767;XM_013521489 XP_013376943 MODEL 8812234 protein-coding Myt1l myelin transcription factor 1 like ENCODES a protein that exhibits cobalt ion binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); neuron development (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); Ataxia (ortholog); atrial heart septal defect (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955487 4457145 4855369 + 102019703 AGCD01059305;AGCD01059306;AGCD01059307;AGCD01059308;AGCD01059309;AGCD01059310;AGCD01059311;AGCD01059312;AGCD01059313;AGCD01059314;AGCD01059315;GBDF01095676;XM_005404380;XM_005404381;XM_005404382;XM_005404383;XM_005404385;XM_013504404;XM_013504405;XM_013504406;XM_013504407;XM_013504408;XM_013504409;XM_013504410 XP_005404437;XP_005404438;XP_005404439;XP_005404440;XP_005404442;XP_013359858;XP_013359859;XP_013359860;XP_013359861;XP_013359862;XP_013359863;XP_013359864 MODEL 9053410 ncrna LOC102007690 uncharacterized LOC102007690 NW_004955435 16245726 16250388 - 102007690 AGCD01033304;GBDF01049547;XR_261703 MODEL 8752355 pseudo LOC102010765 protein FAM133B pseudogene NW_004955405 3393161 3394490 + 102010765 AGCD01004634 MODEL 8783869 protein-coding Ddo D-aspartate oxidase ENCODES a protein that exhibits D-aspartate oxidase activity (ortholog); D-glutamate oxidase activity (ortholog); FAD binding (ortholog); INVOLVED IN aspartate metabolic process (ortholog); D-amino acid catabolic process (ortholog); grooming behavior (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN cytosol (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955411 35142415 35163234 - 102022896 AGCD01012420;GBCQ01014237;XM_005377886;XM_005377887;XM_013510893;XM_013510894 XP_005377943;XP_005377944;XP_013366347;XP_013366348 MODEL 8986693 pseudo LOC102003418 neuroplastin pseudogene NW_004955409 8959472 8960507 + 102003418 AGCD01009426 MODEL 8723035 ncrna LOC102025119 uncharacterized LOC102025119 NW_004955416 31751765 31788345 + 102025119 AGCD01017770;AGCD01017771;AGCD01017772;AGCD01017773;GBDF01288200;XR_001233286;XR_260453;XR_260454;XR_260455;XR_260456 MODEL 8940002 protein-coding Fhit fragile histidine triad diadenosine triphosphatase ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); adenylylsulfatase activity (ortholog); adenylylsulfate-ammonia adenylyltransferase activity (ortholog); INVOLVED IN diadenosine triphosphate catabolic process (ortholog); DNA replication (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955430 221518 508094 + 102030107 AGCD01029093;AGCD01029094;AGCD01029095;GBDJ01064341;XM_005387532 XP_005387589 MODEL 9063771 protein-coding Cryl1 crystallin lambda 1 ENCODES a protein that exhibits L-gulonate 3-dehydrogenase activity (ortholog); NAD+ binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN D-glucuronate catabolic process (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 1A (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955497 1183707 1316720 - 102010708 AGCD01062452;AGCD01062453;AGCD01062454;AGCD01062455;GBDF01054972;GBDF01156341;XM_013505481 XP_013360935 MODEL 8731640 protein-coding Psmg3 proteasome assembly chaperone 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN protein folding chaperone complex (ortholog); protein-containing complex (ortholog) NW_004955460 9186205 9187942 - 102020889 AGCD01048541;GBDF01159629;XM_005397814;XM_013521205;XM_013521206 XP_005397871;XP_013376659;XP_013376660 MODEL 9046725 pseudo LOC102011943 allograft inflammatory factor 1 pseudogene NW_004955404 28664142 28664895 + 102011943 AGCD01003957;XM_005374142 MODEL 9045173 protein-coding Bgn biglycan ENCODES a protein that exhibits cytokine binding (ortholog); extracellular matrix binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN articular cartilage development (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); ASSOCIATED WITH aortic disease (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); sarcolemma (ortholog) NW_004955580 252183 263179 + 102010847 AGCD01075593;GBCE01004164;XM_005414120;XM_005414121 XP_005414177;XP_005414178 MODEL 8707681 protein-coding Hdgfl3 HDGF like 3 ENCODES a protein that exhibits microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN microtubule polymerization (ortholog); negative regulation of microtubule depolymerization (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955416 13501132 13561095 + 102003763 AGCD01017225;AGCD01017226;GBDF01050153;XM_005381466;XM_013512568 XP_005381523;XP_013368022 MODEL 39132491 snrna U6 U6 spliceosomal RNA 9028107 protein-coding Kiaa1143 KIAA1143 ortholog ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN intercellular bridge (ortholog); nucleoplasm (ortholog) NW_004955420 26827888 26831967 + 102007775 AGCD01021433;GBDF01187457;GBDF01187461;XM_005383472 XP_005383529 MODEL 8836070 protein-coding Ndor1 NADPH dependent diflavin oxidoreductase 1 ENCODES a protein that exhibits electron transfer activity (ortholog); FAD binding (ortholog); FMN binding (ortholog); INVOLVED IN electron transport chain (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955513 5208040 5216618 + 102007685 AGCD01066962;GBCQ01070837;XM_005408593;XM_005408594;XM_005408596;XM_005408597;XM_013506595;XM_013506596 XP_005408650;XP_005408651;XP_005408653;XP_005408654;XP_013362049;XP_013362050 MODEL 8905429 protein-coding Wbp2nl WBP2 N-terminal like INVOLVED IN regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN sperm flagellum (ortholog); sperm head (ortholog) NW_004955413 27402614 27442106 + 102030406 AGCD01014504;AGCD01014505;AGCD01014506;AGCD01014507;GBDF01123498;XM_005379389;XM_005379391;XM_005379392;XM_005379393;XM_005379394 XP_005379446;XP_005379448;XP_005379449;XP_005379450;XP_005379451 MODEL 9030327 protein-coding Serpine3 serpin family E member 3 NW_004955431 4694654 4727080 + 102003993 AGCD01030006;AGCD01030007;XM_005387608 XP_005387665 MODEL 8883953 protein-coding LOC102013462 uncharacterized LOC102013462 NW_004955402 4568211 4580597 + 102013462 AGCD01000124;AGCD01000125;GBBH01104032;XM_013518141 XP_013373595 MODEL 8714356 protein-coding LOC102022699 60S ribosomal protein L39 NW_004955416 31552058 31553403 + 102022699 AGCD01017761;AGCD01017762;XM_005381677 XP_005381734 MODEL 9028597 pseudo LOC102003054 importin subunit alpha-1 pseudogene NW_004955519 4042312 4044048 + 102003054 AGCD01067975 MODEL 39131684 rrna 5S_rRNA 5S ribosomal RNA 9035953 protein-coding Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA synthase activity (ortholog); isomerase activity (ortholog); organic acid binding (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); congenital myopathy 28 (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955446 18978261 18996794 + 102005319 AGCD01040419;AGCD01040420;GBDF01090323;XM_005392745;XM_005392746 XP_005392802;XP_005392803 MODEL 8912353 protein-coding Gabarap GABA type A receptor-associated protein ENCODES a protein that exhibits beta-tubulin binding (ortholog); GABA receptor binding (ortholog); microtubule binding (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) NW_004955467 9667938 9670067 + 102025992 AGCD01051521;GBDF01002377;XM_005399538;XM_013522089 XP_005399595;XP_013377543 MODEL 8717162 ncrna LOC102007693 uncharacterized LOC102007693 NW_004955437 532416 541946 + 102007693 AGCD01034142;AGCD01034143;AGCD01034144;GBDJ01142993;XR_261816 MODEL 9066218 pseudo LOC102010772 protein FRG1 pseudogene NW_004955407 27229926 27230701 - 102010772 AGCD01007548 MODEL 8723885 protein-coding B9d1 B9 domain containing 1 ENCODES a protein that exhibits hedgehog receptor activity (ortholog); INVOLVED IN camera-type eye development (ortholog); cilium assembly (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); ciliopathy (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955467 405487 415887 + 102003222 AGCD01051219;GBDF01002264;XM_005399272;XM_005399273;XM_013522256 XP_005399329;XP_005399330;XP_013377710 MODEL 9052564 protein-coding LOC102004847 interferon alpha-4-like NW_004955434 23359685 23360292 - 102004847 AGCD01032705;XM_013516392 XP_013371846 MODEL 8928832 protein-coding LOC102023064 asparagine synthetase [glutamine-hydrolyzing] NW_004955432 14084222 14107610 - 102023064 AGCD01031036;GBBH01144818;GBCC01041400;XM_005388086 XP_005388143 MODEL 8964349 protein-coding Nudt1 nudix hydrolase 1 ENCODES a protein that exhibits 2-hydroxy-ATP hydrolase activity (ortholog); 2-hydroxy-dATP hydrolase activity (ortholog); 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); INVOLVED IN DNA protection (ortholog); male gonad development (ortholog); purine nucleoside catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Cadmium Poisoning (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955460 9678270 9689106 + 102023441 AGCD01048548;GBDI01132131;XM_005397824 XP_005397881 MODEL 8734003 protein-coding Mtss2 MTSS I-BAR domain containing 2 ENCODES a protein that exhibits actin monomer binding (ortholog); GTPase activator activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); lamellipodium organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955484 3429474 3445429 - 102029971 AGCD01058181;GBCC01033134;GBDJ01019266;XM_013503868;XM_013503869;XM_013503871 XP_013359322;XP_013359323;XP_013359325 MODEL 8748754 protein-coding Fam217b family with sequence similarity 217 member B ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955528 3796270 3802409 - 102007588 AGCD01069610;GBDK01396344;XM_005410043;XM_013507502;XM_013507503;XM_013507504;XM_013507505;XR_001231992 XP_005410100;XP_013362956;XP_013362957;XP_013362958;XP_013362959 MODEL 616940639 mirna MIR92A2 microRNA 92a-2 9024105 protein-coding Plb1 phospholipase B1 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); retinyl-palmitate esterase activity (ortholog); INVOLVED IN diacylglycerol catabolic process (ortholog); phosphatidylcholine catabolic process (ortholog); phosphatidylethanolamine catabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955469 10370646 10511263 + 102013161 AGCD01052532;AGCD01052533;AGCD01052534;AGCD01052535;GBBH01117765;XM_005400528;XM_005400529;XM_005400530;XM_013522646;XM_013522647;XM_013522648;XM_013522649;XM_013522650;XM_013522651;XM_013522652 XP_005400585;XP_005400586;XP_005400587;XP_013378100;XP_013378101;XP_013378102;XP_013378103;XP_013378104;XP_013378105;XP_013378106 MODEL 8780653 protein-coding LOC102005876 mRNA cap guanine-N7 methyltransferase-like NW_004956031 668 8233 + 102005876 AGCD01078913;GBDK01394335;XM_013510216 XP_013365670 MODEL 8753358 protein-coding LOC102005187 zinc finger protein 432 NW_004955558 575848 589065 - 102005187 AGCD01073376;GBCE01115771;XM_005412661 XP_005412718 MODEL 39132293 rrna 5S_rRNA 5S ribosomal RNA 9063476 protein-coding Glcci1 glucocorticoid induced 1 INVOLVED IN cellular response to glucose stimulus (ortholog); ASSOCIATED WITH asthma (ortholog); childhood-onset asthma (ortholog); Chronic Lung Allograft Dysfunction (ortholog); FOUND IN cytoplasm (ortholog); podocyte foot (ortholog) NW_004955432 15060239 15112545 + 102028326 AGCD01031059;GBBH01208644;GBDF01279147;XM_013516043 XP_013371497 MODEL 8915565 protein-coding CUNH11orf42 chromosome unknown C11orf42 homolog ASSOCIATED WITH melanoma (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955414 21946935 21954111 + 102016695 AGCD01015438;GBDF01047803;XM_005380122;XM_005380123 XP_005380179;XP_005380180 MODEL 8963721 protein-coding LOC102024449 olfactory receptor 52R1 NW_004955414 20381741 20382694 - 102024449 AGCD01015371;XM_005380472 XP_005380529 MODEL 8779392 protein-coding Gosr2 golgi SNAP receptor complex member 2 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); intra-Golgi vesicle-mediated transport (ortholog); vesicle-mediated transport (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); MUSCULAR DYSTROPHY, CONGENITAL, WITH OR WITHOUT SEIZURES (ortholog); progressive myoclonus epilepsy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955478 10868912 10889405 + 102018182 AGCD01056152;GBCE01186161;XM_005402273 XP_005402330 MODEL 8836264 pseudo LOC102012334 60S ribosomal protein L21 pseudogene NW_004955422 13359228 13359730 + 102012334 AGCD01022822;XM_005384951 MODEL 8950239 protein-coding LOC102018007 unconventional myosin-XVB-like NW_004955506 6612784 6644900 - 102018007 AGCD01065432;GBCE01126793;GBDI01245097;XM_005407496 XP_005407553 MODEL 8979146 protein-coding LOC102007351 melanoma-associated antigen 10-like NW_004955498 6985853 6996187 - 102007351 AGCD01063140;XM_005406439 XP_005406496 MODEL 8898897 pseudo LOC102003422 40S ribosomal protein S6 pseudogene NW_004955411 36312248 36313022 - 102003422 AGCD01012470 MODEL 8929684 protein-coding Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); oligosaccharyltransferase complex (ortholog) NW_004955452 1186733 1195691 - 102020745 AGCD01043835;GBDJ01006766;XM_005394684 XP_005394741 MODEL 8890267 pseudo LOC102003061 protein tilB homolog NW_004955435 18116016 18118858 - 102003061 AGCD01033389 MODEL 8934610 protein-coding Snrnp25 small nuclear ribonucleoprotein U11/U12 subunit 25 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955442 17098487 17101497 - 102009889 AGCD01037937;GBDF01163382;XM_005391683 XP_005391740 MODEL 8741690 protein-coding Asb11 ankyrin repeat and SOCS box containing 11 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); endoplasmic reticulum (ortholog) NW_004955519 2875287 2896122 + 102018015 AGCD01067944;AGCD01067945;GBDI01323080;XM_005409172;XM_005409173;XM_005409175 XP_005409229;XP_005409230;XP_005409232 MODEL 8890008 protein-coding LOC102021365 histone H2A.Z ENCODES a protein that exhibits chromatin DNA binding (ortholog); nucleosomal DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to insulin stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN Barr body (ortholog); chromosome (ortholog); euchromatin (ortholog) NW_004955496 7733910 7735525 + 102021365 AGCD01062383;AGCD01062384;GBDF01006515;XM_005406261;XM_005406262 XP_005406318;XP_005406319 MODEL 8729020 protein-coding Serpinf1 serpin family F member 1 INVOLVED IN cellular response to cobalt ion (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); adenoid cystic carcinoma (ortholog); Albuminuria (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); basement membrane (ortholog) NW_004955481 1414930 1426436 - 102015719 AGCD01056832;GBDK01110727;XM_005402604;XM_005402605 XP_005402661;XP_005402662 MODEL 9008756 ncrna LOC102009976 uncharacterized LOC102009976 NW_004955515 4423696 4427822 - 102009976 AGCD01067320;GBDF01279453;XR_001231800;XR_001231801;XR_001231802;XR_001231803 MODEL 8979305 protein-coding Fhl1 four and a half LIM domains 1 ENCODES a protein that exhibits channel activator activity (ortholog); potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); centronuclear myopathy (ortholog); diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955489 8888845 8944778 - 102014909 AGCD01060024;GBCQ01006174;XM_005404596;XM_005404598;XM_013504495;XM_013504496 XP_005404653;XP_005404655;XP_013359949;XP_013359950 MODEL 39134472 misc_rna 7SK 7SK RNA 39132492 snrna U6 U6 spliceosomal RNA 39134160 misc_rna 7SK 7SK RNA 8709807 pseudo LOC102008830 ATP synthase F(0) complex subunit C3, mitochondrial pseudogene NW_004955464 13405011 13405720 + 102008830 AGCD01050275 MODEL 8941324 protein-coding Bhlha15 basic helix-loop-helix family member a15 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell differentiation (ortholog); cell maturation (ortholog); FOUND IN nucleus (ortholog) NW_004955460 14103053 14106714 + 102028274 AGCD01048738;GBDF01053345;XM_005397913;XR_263065 XP_005397970 MODEL 8751688 protein-coding Kiaa1191 KIAA1191 ortholog ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955408 28631523 28645882 - 102008702 AGCD01008721;GBDJ01006796;XM_005376368;XM_005376369;XM_005376370;XM_013509541;XM_013509546 XP_005376425;XP_005376426;XP_005376427;XP_013364995;XP_013365000 MODEL 10164920 protein-coding LOC106149249 sperm-egg fusion protein Juno-like NW_004955441 18910203 18910901 - 106149249 AGCD01037327;XM_013517524 XP_013372978 MODEL 8761633 protein-coding Myzap myocardial zonula adherens protein INVOLVED IN intracellular signal transduction (ortholog); ASSOCIATED WITH Dilated Cardiomyopathy 2K (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN anchoring junction (ortholog); cortical actin cytoskeleton (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955450 16664673 16730769 - 102019454 AGCD01042849;AGCD01042850;GBBH01135262;GBDJ01062569;XM_013518876 XP_013374330 MODEL 8880839 protein-coding Plbd1 phospholipase B domain containing 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) NW_004955413 11266589 11326565 - 102026961 AGCD01013956;AGCD01013957;GBCE01152183;XM_013511442 XP_013366896 MODEL 10361903 ncrna LOC106147096 uncharacterized LOC106147096 NW_004955518 3348143 3360986 + 106147096 AGCD01067799;AGCD01067800;GBDF01074799;XR_001231834;XR_001231835;XR_001231836 MODEL 9053769 ncrna LOC102025121 uncharacterized LOC102025121 NW_004955418 20489068 20501173 + 102025121 AGCD01019228;GBDF01017286;XR_260574 MODEL 8910313 ncrna LOC102007697 uncharacterized LOC102007697 NW_004955438 985521 989683 - 102007697 AGCD01034966;GBDF01049911;XR_001235136 MODEL 8866268 protein-coding Gabarapl1 GABA type A receptor associated protein like 1 ENCODES a protein that exhibits cargo adaptor activity (ortholog); phospholipid binding (ortholog); Tat protein binding (ortholog); INVOLVED IN glycophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); high grade glioma (ortholog); FOUND IN autophagosome (ortholog); cell body (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955413 7653396 7661835 - 102007753 AGCD01013827;AGCD01013828;GBBH01032189;XM_005378935 XP_005378992 MODEL 8742990 protein-coding Crym crystallin mu ENCODES a protein that exhibits delta1-piperideine-2-carboxylate reductase activity (ortholog); hormone binding (ortholog); NADP binding (ortholog); INVOLVED IN amino acid catabolic process (ortholog); L-lysine catabolic process (ortholog); mitochondrial transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant nonsyndromic deafness 40 (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955493 443956 460041 - 102012101 AGCD01060851;GBCB01023826;GBDF01193692;XM_013504898 XP_013360352 MODEL 8944017 ncrna LOC102011945 uncharacterized LOC102011945 NW_004955405 15509552 15549105 + 102011945 AGCD01004947;AGCD01004948;GBDF01052663;XR_259378;XR_259379 MODEL 8751367 protein-coding Nudt12 nudix hydrolase 12 ENCODES a protein that exhibits magnesium ion binding (ortholog); NAD+ diphosphatase activity (ortholog); NADH pyrophosphatase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); mRNA catabolic process (ortholog); mRNA methylguanosine-cap decapping (ortholog); PARTICIPATES IN niacin metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); peroxisome (ortholog) NW_004955418 10459644 10474124 + 102023597 AGCD01018979;GBCQ01065641;XM_005382181;XM_005382182;XM_005382183 XP_005382238;XP_005382239;XP_005382240 MODEL 8892929 ncrna LOC102006226 uncharacterized LOC102006226 NW_004955412 3986877 4028160 - 102006226 AGCD01012589;AGCD01012590;GBDF01111005;XR_259969 MODEL 8792603 protein-coding Cxcr5 C-X-C motif chemokine receptor 5 INVOLVED IN leukocyte chemotaxis (ortholog); lymph node development (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH primary biliary cholangitis (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955412 20016768 20031635 + 102020318 AGCD01012992;GBBH01107031;XM_005378282 XP_005378339 MODEL 8989077 protein-coding Hdhd2 haloacid dehalogenase like hydrolase domain containing 2 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955402 32495053 32529284 - 102006729 AGCD01000824;GBCB01088536;XM_005372887;XM_013510503;XM_013510504;XM_013510505 XP_005372944;XP_013365957;XP_013365958;XP_013365959 MODEL 8984309 protein-coding Ints8 integrator complex subunit 8 INVOLVED IN protein localization to chromatin (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); INTAC complex (ortholog) NW_004955417 10975716 11027697 + 102028858 AGCD01018113;AGCD01018114;AGCD01018115;AGCD01018116;AGCD01018117;AGCD01018118;GBDF01005684;XM_005381819 XP_005381876 MODEL 8956832 pseudo LOC102022700 60S ribosomal protein L17 pseudogene NW_004955417 29886975 29891557 - 102022700 AGCD01018611 MODEL 10264758 ncrna LOC106150039 uncharacterized LOC106150039 NW_004955462 9394271 9394930 + 106150039 AGCD01049338;XR_001236592 MODEL 9037904 protein-coding LOC102024450 equatorin-like NW_004955472 7589444 7603493 + 102024450 AGCD01053624;GBDF01045098;XM_005401147;XM_013522932;XM_013522933 XP_005401204;XP_013378386;XP_013378387 MODEL 39131685 rrna 5S_rRNA 5S ribosomal RNA 8738475 protein-coding LOC102010775 olfactory receptor 1468-like NW_004955408 1596483 1597001 + 102010775 AGCD01007966;GBDF01134956;XM_005376562 XP_005376619 MODEL 8961118 protein-coding Ndp norrin cystine knot growth factor NDP ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN action potential (ortholog); angiogenesis (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); exudative vitreoretinopathy (ortholog); Hereditary Eye Diseases (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955516 4218703 4244774 + 102006065 AGCD01067519;GBCE01165457;XM_005408998 XP_005409055 MODEL 8874890 protein-coding LOC102018009 anthrax toxin receptor-like NW_004955510 6344262 6376039 + 102018009 AGCD01066305;AGCD01066306;GBDJ01209437;XM_005407924;XM_005407925;XM_005407926;XM_005407927;XM_013506336 XP_005407981;XP_005407982;XP_005407983;XP_005407984;XP_013361790 MODEL 9021151 ncrna LOC102004848 uncharacterized LOC102004848 NW_004955435 5016629 5017589 - 102004848 AGCD01032870;GBDF01300438;XR_261661 MODEL 8933251 protein-coding Kiaa1210 KIAA1210 ortholog ASSOCIATED WITH asthma (ortholog); cerebral palsy (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); basal ectoplasmic specialization (ortholog) NW_004955534 815636 873969 + 102013758 AGCD01070472;AGCD01070473;AGCD01070474;AGCD01070475;AGCD01070476;GBDF01154450;XM_005410451;XM_013507699;XM_013507700 XP_005410508;XP_013363153;XP_013363154 MODEL 8819299 pseudo LOC102003423 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955464 11721827 11722678 - 102003423 AGCD01050161 MODEL 8715244 trna trnL1(tag) tRNA-Leu MT 11681 11750 + 15822232 8844986 protein-coding Psmg4 proteasome assembly chaperone 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN protein folding chaperone complex (ortholog); protein-containing complex (ortholog) NW_004955465 10007136 10014921 - 102014653 AGCD01050498;GBBH01140190;GBCE01097527;XM_005398894 XP_005398951 MODEL 8900301 protein-coding Ddr1 discoidin domain receptor tyrosine kinase 1 ENCODES a protein that exhibits collagen binding (ortholog); protein tyrosine kinase collagen receptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); axon development (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcoholic hepatitis (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border (ortholog); plasma membrane (ortholog) NW_004955583 820893 838515 + 102019869 AGCD01075866;AGCD01075867;AGCD01075868;GBCB01060373;XM_005414320;XM_013509826;XM_013509827;XM_013509828;XM_013509829;XM_013509830;XM_013509831;XM_013509832;XM_013509833 XP_005414377;XP_013365280;XP_013365281;XP_013365282;XP_013365283;XP_013365284;XP_013365285;XP_013365286;XP_013365287 MODEL 8764864 protein-coding LOC102005878 RNA-binding protein NOB1-like NW_004957102 190 886 + 102005878 AGCD01080498;XM_005415224 XP_005415281 MODEL 8996456 protein-coding Snrnp27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 ASSOCIATED WITH atrial fibrillation (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN precatalytic spliceosome (ortholog); spliceosomal complex (ortholog); U4/U6 x U5 tri-snRNP complex (ortholog) NW_004955424 15243190 15251831 - 102013100 AGCD01024700;GBDF01118203;XM_005385637;XM_013514749;XM_013514750;XR_001234249;XR_001234250 XP_005385694;XP_013370203;XP_013370204 MODEL 9010659 protein-coding Fam219a family with sequence similarity 219 member A ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955472 1668400 1718194 + 102025568 AGCD01053409;GBDF01044769;XM_005401063;XM_005401064;XM_005401065;XM_005401066;XM_005401067;XM_005401068;XM_005401069;XM_005401070;XM_005401071;XM_005401072;XM_005401073;XM_005401074;XM_013522972;XM_013522974;XM_013522975;XM_013522976;XM_013522977;XM_013522979 XP_005401120;XP_005401121;XP_005401122;XP_005401123;XP_005401124;XP_005401125;XP_005401126;XP_005401127;XP_005401128;XP_005401129;XP_005401130;XP_005401131;XP_013378426;XP_013378428;XP_013378429;XP_013378430;XP_013378431;XP_013378433 MODEL 8831646 protein-coding Mttp microsomal triglyceride transfer protein ENCODES a protein that exhibits apolipoprotein binding (ortholog); ceramide 1-phosphate transfer activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); abetalipoproteinemia (ortholog); Abetalipoproteinemia Neuropathy (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955496 7963323 8022393 - 102024025 AGCD01062387;GBBH01204379;XM_013505400;XM_013505401 XP_013360854;XP_013360855 MODEL 39132294 rrna 5S_rRNA 5S ribosomal RNA 8706350 pseudo LOC102005191 WW domain-binding protein 5-like NW_004955445 15861773 15862606 + 102005191 AGCD01039857 MODEL 39132493 snrna U6 U6 spliceosomal RNA 9061509 protein-coding Wbp4 WW domain binding protein 4 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955404 51046245 51094245 + 102011395 AGCD01004543;AGCD01004544;AGCD01004545;AGCD01004546;AGCD01004547;GBBH01214258;GBCE01024729;XM_013516774;XM_013516775 XP_013372228;XP_013372229 MODEL 39134161 misc_rna 7SK 7SK RNA 8823467 protein-coding Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); adipose tissue development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); brain disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955435 22804484 22820807 - 102018322 AGCD01033520;GBCQ01032700;XM_005389089 XP_005389146 MODEL 8959376 protein-coding Got1 glutamic-oxaloacetic transaminase 1 ENCODES a protein that exhibits (2S)-2-aminobutanoate:2-oxoglutarate transaminase activity (ortholog); carboxylic acid binding (ortholog); L-aspartate:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to glucagon stimulus (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN AGAT deficiency pathway; alkaptonuria pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); amyloidosis (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955507 5346937 5370072 - 102015653 AGCD01065671;GBDI01132595;XM_005407670 XP_005407727 MODEL 8831291 pseudo LOC102007353 60S ribosomal protein L31 pseudogene NW_004955426 12943982 12944411 + 102007353 AGCD01026352 MODEL 10328034 protein-coding LOC106149250 serine/arginine repetitive matrix protein 1-like NW_004955441 19520486 19530118 + 106149250 AGCD01037348;GBDF01253386;XM_013517525 XP_013372979 MODEL 8858835 protein-coding Mzb1 marginal zone B and B1 cell specific protein INVOLVED IN integrin activation (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of immunoglobulin production (ortholog); ASSOCIATED WITH COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) NW_004955418 1170365 1172581 + 102019272 AGCD01018712;GBDJ01385444;XM_005382073 XP_005382130 MODEL 8955256 protein-coding LOC102012336 guanylate-binding protein 4-like NW_004955423 4956079 4970449 + 102012336 AGCD01023550;GBDK01006373;XM_013514414;XM_013514415 XP_013369868;XP_013369869 MODEL 9067949 protein-coding LOC102003062 vomeronasal type-2 receptor 116-like NW_004955532 118728 136794 + 102003062 AGCD01070099;AGCD01070100;XM_013507568 XP_013363022 MODEL 8942660 pseudo LOC102021368 ferritin light chain pseudogene NW_004955500 1650018 1650857 + 102021368 AGCD01063669 MODEL 616940647 mirna MIR935 microRNA 935 8870183 protein-coding Asb12 ankyrin repeat and SOCS box containing 12 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN ubiquitin ligase complex (ortholog) NW_004955475 4429854 4436633 + 102003964 AGCD01054880;GBCB01005243;XM_005401554;XM_005401555 XP_005401611;XP_005401612 MODEL 8877138 pseudo LOC102009977 inosine-5'-monophosphate dehydrogenase 2 pseudogene NW_004955516 3145206 3147423 - 102009977 AGCD01067484 MODEL 9044461 protein-coding LOC102013464 cyclin-dependent kinase inhibitor 1C-like NW_004958204 12 1007 - 102013464 AGCD01081600;GBBH01041050;GBCQ01066908;XM_005415240 XP_005415297 MODEL 8810648 protein-coding Gabarapl2 GABA type A receptor associated protein like 2 ENCODES a protein that exhibits phosphatidylethanolamine binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); negative regulation of proteasomal protein catabolic process (ortholog); protein localization to endoplasmic reticulum (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955484 1991020 2004925 - 102018730 AGCD01058076;AGCD01058077;GBDJ01413558;XM_005403439 XP_005403496 MODEL 8827706 protein-coding Cryz crystallin zeta ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR binding (ortholog); NADH binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); protein homotetramerization (ortholog); xenobiotic catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955423 17952783 17975982 + 102026883 AGCD01023866;GBDF01160339;XM_005385231;XM_005385232;XM_005385233 XP_005385288;XP_005385289;XP_005385290 MODEL 8939963 protein-coding Fhl2 four and a half LIM domains 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN atrial cardiac muscle cell development (ortholog); heart trabecula formation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955470 10240117 10286117 - 102028405 AGCD01052859;AGCD01052860;GBCQ01085852;XM_005400786;XM_005400787;XM_005400788;XM_013522764;XM_013522765 XP_005400843;XP_005400844;XP_005400845;XP_013378218;XP_013378219 MODEL 8842186 protein-coding LOC102005879 keratin, type I cytoskeletal 42-like NW_004955451 15945587 15951095 - 102005879 AGCD01043641;GBBH01099405;XM_005394414 XP_005394471 MODEL 8700366 protein-coding LOC102008833 olfactory receptor 1F12 NW_004955465 13529663 13530604 + 102008833 AGCD01050613;XM_005398956 XP_005399013 MODEL 8866917 protein-coding Nudt13 nudix hydrolase 13 ENCODES a protein that exhibits NAD+ diphosphatase activity (ortholog); NADH pyrophosphatase activity (ortholog); NADPH pyrophosphatase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955437 18572172 18591972 - 102022960 AGCD01034803;GBDF01253201;GBDF01253202;XM_005389995 XP_005390052 MODEL 8967025 ncrna LOC102023409 uncharacterized LOC102023409 NW_004955446 13005196 13038416 - 102023409 AGCD01040245;GBDF01200490;XR_001235643;XR_262396;XR_262397 MODEL 8965219 protein-coding Bhlha9 basic helix-loop-helix family member a9 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); ASSOCIATED WITH Complex Camptosynpolydactyly (ortholog); genetic disease (ortholog); Mesoaxial Synostotic Syndactyly with Phalangeal Reduction (ortholog); FOUND IN cytoplasm (ortholog) NW_004955481 2769023 2770269 + 102007769 AGCD01056883;AGCD01056884;XM_005402922 XP_005402979 MODEL 8829083 pseudo LOC102023072 leucine-rich repeat transmembrane protein FLRT1-like NW_004955436 799748 800600 + 102023072 AGCD01033559 MODEL 9060940 protein-coding Plbd2 phospholipase B domain containing 2 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN lysosomal lumen (ortholog); lysosome (ortholog) NW_004955482 9630300 9643212 + 102017339 AGCD01057577;GBBH01031135;GBDK01000319;XM_013503595 XP_013359049 MODEL 39134162 misc_rna 7SK 7SK RNA 39134473 misc_rna 7SK 7SK RNA 9012636 protein-coding Serpinf2 serpin family F member 2 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); collagen fibril organization (ortholog); maintenance of blood vessel diameter homeostasis by renin-angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alpha-2-plasmin inhibitor deficiency (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); fibrinogen complex (ortholog) NW_004955481 1441262 1449078 - 102016267 AGCD01056832;GBCQ01033980;XM_005402606;XM_005402607 XP_005402663;XP_005402664 MODEL 8883209 pseudo LOC102018010 olfactory receptor 8K3-like NW_004955511 1331160 1331970 + 102018010 AGCD01066365 MODEL 8873602 protein-coding LOC102007356 olfactory receptor 13G1-like NW_004955507 6477447 6478391 - 102007356 AGCD01065718;XM_005407724 XP_005407781 MODEL 9041885 protein-coding B9d2 B9 domain containing 2 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH ciliopathy (ortholog); epilepsy (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955555 288919 295861 - 102015459 AGCD01073024;GBDK01361917;XM_005412340;XM_005412341 XP_005412397;XP_005412398 MODEL 8784554 protein-coding Glce glucuronic acid epimerase ENCODES a protein that exhibits calcium ion binding (ortholog); heparosan-N-sulfate-glucuronate 5-epimerase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); heparin proteoglycan biosynthetic process (ortholog); negative regulation of cell projection organization (ortholog); ASSOCIATED WITH cerebrovascular disease (ortholog); hepatocellular carcinoma (ortholog); hypertension (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955450 7149721 7226835 - 102017082 AGCD01042533;AGCD01042534;GBDF01051553;XM_005393663;XM_005393664;XM_005393665;XM_005393666 XP_005393720;XP_005393721;XP_005393722;XP_005393723 MODEL 8817817 pseudo LOC102003428 40S ribosomal protein S2 pseudogene NW_004955467 3259017 3259823 - 102003428 AGCD01051332 MODEL 39133662 mirna MIR96 microRNA 96 8909475 protein-coding Ddr2 discoidin domain receptor tyrosine kinase 2 ENCODES a protein that exhibits collagen binding (ortholog); protein tyrosine kinase collagen receptor activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to angiotensin (ortholog); ASSOCIATED WITH adenosquamous gallbladder carcinoma (ortholog); alcoholic liver cirrhosis (ortholog); colorectal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955462 13578638 13644834 - 102004790 AGCD01049428;AGCD01049429;AGCD01049430;GBBH01076825;GBDK01239606;XM_013521453 XP_013376907 MODEL 39132295 rrna 5S_rRNA 5S ribosomal RNA 8810622 protein-coding Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955482 5457159 5461694 - 102018093 AGCD01057330;AGCD01057331;GBCB01097803;GBDJ01187224;XM_005403037 XP_005403094 MODEL 8891762 pseudo LOC102022703 cyclin-dependent kinase 4 pseudogene NW_004955418 20687185 20701319 - 102022703 AGCD01019241 MODEL 8786853 protein-coding Cxcr6 C-X-C motif chemokine receptor 6 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); ASSOCIATED WITH systemic scleroderma (ortholog) NW_004955420 26056464 26061992 - 102003029 AGCD01021389;GBDJ01402626;XM_005383457 XP_005383514 MODEL 9050043 pseudo LOC102025125 golgin subfamily A member 7 pseudogene NW_004955419 5623710 5624828 + 102025125 AGCD01019830 MODEL 9027568 pseudo LOC102024456 serine/threonine-protein kinase Kist pseudogene NW_004955475 5028388 5029292 + 102024456 AGCD01054900 MODEL 10119420 protein-coding LOC106150040 translation initiation factor IF-2-like NW_004955406 20155524 20156803 + 106150040 AGCD01006100;GBDF01152766;XM_013521368 XP_013376822 MODEL 10340611 ncrna LOC106147097 uncharacterized LOC106147097 NW_004955518 1919365 1939005 - 106147097 AGCD01067769;GBDF01265857;XR_001231837 MODEL 9022906 protein-coding Ints9 integrator complex subunit 9 INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) NW_004955403 51111418 51199430 - 102016222 AGCD01002988;GBDF01222215;XM_005373781 XP_005373838 MODEL 8785572 protein-coding LOC102004852 trace amine-associated receptor 7a-like NW_004955436 13109272 13110333 - 102004852 AGCD01033854;XM_005389306 XP_005389363 MODEL 8779106 pseudo LOC102007698 V-type proton ATPase subunit F pseudogene NW_004955438 4435333 4445285 + 102007698 AGCD01035043;AGCD01035044 MODEL 8950825 protein-coding Bhlhe22 basic helix-loop-helix family member e22 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); central nervous system projection neuron axonogenesis (ortholog); cerebral cortex regionalization (ortholog); FOUND IN nucleus (ortholog) NW_004955444 14458307 14460441 - 102014620 AGCD01039122;GBDK01059279;XM_013518126 XP_013373580 MODEL 8712749 protein-coding Got1l1 glutamic-oxaloacetic transaminase 1 like 1 ENCODES a protein that exhibits L-aspartate:2-oxoglutarate transaminase activity (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955463 13622781 13627165 - 102014990 AGCD01049876;GBDF01088565;XM_005398420;XM_005398421 XP_005398477;XP_005398478 MODEL 8843669 trna trnL2 tRNA-Leu MT 2643 2718 + 15822217 9035085 protein-coding Mzf1 myeloid zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955584 1167428 1174434 - 102030489 AGCD01075983;AGCD01075984;GBBH01051261;GBCE01056958;XM_013509855 XP_013365309 MODEL 8800130 protein-coding Psors1c2 psoriasis susceptibility 1 candidate 2 ASSOCIATED WITH cholangiocarcinoma (ortholog); multiple myeloma (ortholog) NW_004955583 975037 977944 - 102024627 AGCD01075875;GBDJ01298572;XM_005414333;XM_013509772;XM_013509773 XP_005414390;XP_013365226;XP_013365227 MODEL 8765971 ncrna LOC102021370 uncharacterized LOC102021370 NW_004955426 17761060 17765467 - 102021370 AGCD01026506;GBDK01047985;XR_261199 MODEL 8826370 protein-coding Mturn maturin, neural progenitor differentiation regulator homolog INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of JNK cascade (ortholog); positive regulation of megakaryocyte differentiation (ortholog); FOUND IN cytoplasm (ortholog) NW_004955410 31435282 31450450 + 102028506 AGCD01011325;GBCE01185142;GBDJ01260486;XM_013510695 XP_013366149 MODEL 8902229 ncrna LOC102006227 uncharacterized LOC102006227 NW_004955465 7168095 7203880 + 102006227 AGCD01050456;AGCD01050457;GBBH01168662;XR_263249;XR_263250 MODEL 39132495 snrna U6 U6 spliceosomal RNA 8710774 protein-coding Asb13 ankyrin repeat and SOCS box containing 13 ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955421 22328393 22380656 - 102024917 AGCD01022132;AGCD01022133;AGCD01022134;GBDF01088974;XM_005383841;XM_013513669 XP_005383898;XP_013369123 MODEL 8941544 pseudo LOC102007357 transmembrane protein 168 pseudogene NW_004955511 1610996 1613016 + 102007357 AGCD01066376 MODEL 8998297 protein-coding Hdhd3 haloacid dehalogenase like hydrolase domain containing 3 ASSOCIATED WITH sarcoma (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog) NW_004955419 14118729 14123578 + 102022819 AGCD01020012;GBBH01094483;XM_005382676;XM_005382677;XM_013513136 XP_005382733;XP_005382734;XP_013368590 MODEL 8826727 protein-coding Serping1 serpin family G member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of complement activation, lectin pathway (ortholog); PARTICIPATES IN coagulation cascade pathway; kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular region (ortholog) NW_004955511 2545337 2557850 + 102019092 AGCD01066414;GBCQ01008778;GBDF01198841;XM_013506484 XP_013361938 MODEL 39131686 rrna 5S_rRNA 5S ribosomal RNA 8773316 protein-coding Wdcp WD repeat and coiled coil containing ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN protein complex oligomerization (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955469 6236653 6261753 - 102023140 AGCD01052374;AGCD01052375;GBCE01018761;XM_005400370;XM_005400371 XP_005400427;XP_005400428 MODEL 8755781 pseudo LOC102023410 cofilin-2 pseudogene NW_004955573 449805 451517 - 102023410 AGCD01074979 MODEL 8769096 protein-coding Cxxc1 CXXC finger protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); unmethylated CpG binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN histone methyltransferase complex (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955402 35335520 35340891 - 102017933 AGCD01000878;GBBH01090896;XM_005372924;XM_005372925;XM_013510694;XM_013510699 XP_005372981;XP_005372982;XP_013366148;XP_013366153 MODEL 8958487 protein-coding Kiaa1217 KIAA1217 ortholog INVOLVED IN embryonic skeletal system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955429 4587329 5064712 - 102011566 AGCD01028494;AGCD01028495;AGCD01028496;AGCD01028497;AGCD01028498;AGCD01028499;AGCD01028500;AGCD01028501;AGCD01028502;AGCD01028503;GBDK01092702;XM_005386916;XM_005386920;XM_005386924;XM_005386925;XM_005386926;XM_013515407;XM_013515408;XM_013515409;XM_013515410;XM_013515411;XM_013515412;XM_013515413;XM_013515414;XM_013515415;XM_013515416;XM_013515417;XM_013515418;XM_013515419;XM_013515420;XM_013515421 XP_005386973;XP_005386977;XP_005386981;XP_005386982;XP_005386983;XP_013370861;XP_013370862;XP_013370863;XP_013370864;XP_013370865;XP_013370866;XP_013370867;XP_013370868;XP_013370869;XP_013370870;XP_013370871;XP_013370872;XP_013370873;XP_013370874;XP_013370875 MODEL 39134474 misc_rna 7SK 7SK RNA 8737909 protein-coding LOC102004854 cytochrome b561 domain-containing protein 2 NW_004955532 2140745 2155258 + 102004854 AGCD01070220;GBCQ01070938;XM_005410273;XM_013507592;XM_013507593;XM_013507594;XM_013507595 XP_005410330;XP_013363046;XP_013363047;XP_013363048;XP_013363049 MODEL 8858480 protein-coding Fam219b family with sequence similarity 219 member B ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955450 3054761 3060064 + 102006188 AGCD01042420;GBDF01220158;XM_005393530;XM_013518861 XP_005393587;XP_013374315 MODEL 8963431 ncrna LOC102013467 uncharacterized LOC102013467 NW_004955404 29028733 29038238 + 102013467 AGCD01003968;GBDF01118402;XR_001235108 MODEL 8855936 pseudo LOC102005881 solute carrier family 35 member E3-like NW_004955451 2883147 2889213 - 102005881 AGCD01043026 MODEL 8870338 pseudo LOC102010777 cyclin-dependent kinase 4 pseudogene NW_004955458 15031076 15032155 + 102010777 AGCD01047860 MODEL 8721316 protein-coding Hmgn1 high mobility group nucleosome binding domain 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN chromatin organization (ortholog); post-embryonic camera-type eye morphogenesis (ortholog); pyrimidine dimer repair by nucleotide-excision repair (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 38136386 38142587 - 102019775 AGCD01007796;GBDF01047791;XM_005375983 XP_005376040 MODEL 8932454 protein-coding Ndrg1 N-myc downstream regulated 1 ENCODES a protein that exhibits cadherin binding (ortholog); gamma-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); mast cell activation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN adherens junction (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955461 7787068 7836380 - 102016138 AGCD01048923;GBBH01061733;XM_005398027;XM_013521347 XP_005398084;XP_013376801 MODEL 8946650 ncrna LOC102022705 uncharacterized LOC102022705 NW_004955419 18376765 18384837 - 102022705 AGCD01020172;GBCE01062454;XR_001233557;XR_260642 MODEL 8806117 protein-coding LOC102024459 arpin NW_004955416 15340070 15399017 + 102024459 AGCD01017323;AGCD01017324;AGCD01017325;AGCD01017326;GBDF01308168;XM_005381538 XP_005381595 MODEL 10181333 ncrna LOC106149251 uncharacterized LOC106149251 NW_004955441 6101961 6102634 + 106149251 AGCD01036901;GBDK01388908;XR_001235298 MODEL 9042858 ncrna LOC102003065 uncharacterized LOC102003065 NW_004955437 17589746 17591956 + 102003065 AGCD01034751;GBDF01287696;XR_261886 MODEL 8957875 protein-coding LOC102008838 V-set and immunoglobulin domain-containing protein 8 NW_004955468 11648880 11658624 - 102008838 AGCD01052136;GBDK01042318;XM_005400177;XM_005400178 XP_005400234;XP_005400235 MODEL 9034945 pseudo LOC102023075 casein kinase II subunit alpha pseudogene NW_004955536 314150 315348 - 102023075 AGCD01070724 MODEL 8901578 protein-coding LOC102025126 glutathione S-transferase omega-1 NW_004955485 6391364 6403112 - 102025126 AGCD01058618;GBCB01001864;GBDJ01025506;XM_005403783 XP_005403840 MODEL 9033716 pseudo LOC102007704 soluble lamin-associated protein of 75 kDa pseudogene NW_004955441 15516264 15525569 - 102007704 AGCD01037250 MODEL 39134163 misc_rna 7SK 7SK RNA 8897308 pseudo LOC102018013 protein AF-9 pseudogene NW_004955432 1643335 1645310 + 102018013 AGCD01030603 MODEL 9044062 protein-coding Bhlhe23 basic helix-loop-helix family member e23 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of retinal cell programmed cell death (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); post-embryonic eye morphogenesis (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) NW_004955528 1094234 1094674 + 102019428 AGCD01069552;GBBH01169029;XM_005409997 XP_005410054 MODEL 8956875 protein-coding CUNH11orf52 chromosome unknown C11orf52 homolog ASSOCIATED WITH Carney-Stratakis syndrome (ortholog); FOUND IN cell junction (ortholog) NW_004955412 13635088 13640604 + 102023886 AGCD01012843;GBCB01120660;XM_005378097;XM_005378098 XP_005378154;XP_005378155 MODEL 8863514 protein-coding LOC102023422 olfactory receptor 7C1-like NW_004955626 22772 23710 + 102023422 AGCD01077461;XM_005415025 XP_005415082 MODEL 8858947 protein-coding Mzt1 mitotic spindle organizing protein 1 INVOLVED IN gamma-tubulin complex localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN centrosome (ortholog); gamma-tubulin ring complex (ortholog); spindle (ortholog) NW_004955404 33945576 33961922 + 102026597 AGCD01004084;AGCD01004085;GBDJ01353607;XM_013516957 XP_013372411 MODEL 9058839 protein-coding Cryzl1 crystallin zeta like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog) NW_004955407 33016289 33055495 - 102023003 AGCD01007694;AGCD01007695;GBCQ01152292;XM_005375689;XM_013504327 XP_005375746;XP_013359781 MODEL 8986078 protein-coding Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 ENCODES a protein that exhibits extracellular matrix protein binding (ortholog); G protein-coupled GABA receptor activity (ortholog); G protein-coupled neurotransmitter receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); negative regulation of adenylate cyclase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN axolemma (ortholog); cytoplasm (ortholog); dendritic shaft (ortholog) NW_004955583 85255 115140 - 102008906 AGCD01075793;AGCD01075794;GBBH01164394;GBCE01009495;XM_005414288 XP_005414345 MODEL 150537123 mirna MIR98 microRNA 98 39132298 rrna 5S_rRNA 5S ribosomal RNA 8973116 protein-coding Gldc glycine decarboxylase ENCODES a protein that exhibits enzyme binding (ortholog); glycine binding (ortholog); glycine dehydrogenase (decarboxylating) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glycine catabolic process (ortholog); glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Apnea (ortholog); benign neonatal seizures (ortholog); cervical cancer (ortholog); FOUND IN glycine cleavage complex (ortholog); mitochondrion (ortholog) NW_004955434 10431434 10533118 - 102013644 AGCD01032345;AGCD01032346;AGCD01032347;AGCD01032348;AGCD01032349;AGCD01032350;GBCQ01036197;GBDF01249012;XM_005388751 XP_005388808 MODEL 8959158 protein-coding Pspc1 paraspeckle component 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); membraneless organelle assembly (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nuclear matrix (ortholog) NW_004955497 574678 641885 - 102006258 AGCD01062423;AGCD01062424;AGCD01062425;AGCD01062426;GBCQ01068863;GBDF01053680;XM_005406291 XP_005406348 MODEL 8960241 protein-coding Ddrgk1 DDRGK domain containing 1 ENCODES a protein that exhibits ubiquitin-like protein ligase binding (ortholog); UFM1-modified protein reader activity (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); transferase complex (ortholog) NW_004955415 14085404 14098220 - 102024453 AGCD01016284;AGCD01016285;GBCB01023181;XM_005380785 XP_005380842 MODEL 9054118 protein-coding Nudt14 nudix hydrolase 14 ENCODES a protein that exhibits ADP-glucose pyrophosphatase activity (ortholog); ADP-ribose diphosphatase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog) NW_004955538 3444498 3450396 - 102004420 AGCD01071163;GBCE01001642;XM_005410856;XM_005410857 XP_005410913;XP_005410914 MODEL 8899489 protein-coding Mtus1 microtubule associated scaffold protein 1 INVOLVED IN cellular response to angiotensin (ortholog); cellular response to peptide hormone stimulus (ortholog); regulation of macrophage chemotaxis (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); nucleolus (ortholog) NW_004955552 1867477 2040659 + 102022750 AGCD01072791;AGCD01072792;AGCD01072793;AGCD01072794;AGCD01072795;AGCD01072796;AGCD01072797;GBBH01208135;XM_005412200;XM_005412201;XM_005412202;XM_005412203;XM_005412204;XM_013508602;XM_013508603;XM_013508604 XP_005412257;XP_005412258;XP_005412259;XP_005412260;XP_005412261;XP_013364056;XP_013364057;XP_013364058 MODEL 8817908 protein-coding LOC102006228 histone H3 ENCODES a protein that exhibits structural constituent of chromatin (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); nucleosome assembly (ortholog); FOUND IN chromatin (ortholog); extracellular exosome (ortholog); nucleoplasm (ortholog) NW_004955465 13338289 13339268 + 102006228 AGCD01050601;XM_005398948 XP_005399005 MODEL 39132496 snrna U6 U6 spliceosomal RNA 8960611 ncrna LOC102011946 uncharacterized LOC102011946 NW_004955452 12789670 12791076 - 102011946 AGCD01044366;GBDF01032085;XR_262681 MODEL 39131687 rrna 5S_rRNA 5S ribosomal RNA 9013641 protein-coding Serpinh1 serpin family H member 1 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN chondrocyte development involved in endochondral bone morphogenesis (ortholog); collagen biosynthetic process (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955414 16284845 16292828 - 102024992 AGCD01015208;GBCE01003981;XM_005379884;XM_005379885;XM_013512064 XP_005379941;XP_005379942;XP_013367518 MODEL 8799638 trna trnM(cat) tRNA-Met MT 3818 3886 + 15822219 9032181 pseudo LOC102005195 arylacetamide deacetylase-like NW_004955448 2874204 2882455 - 102005195 AGCD01041291 MODEL 8732395 protein-coding Plcb1 phospholipase C beta 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); cellular response to fluoride (ortholog); cellular response to glyceraldehyde (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); Alzheimer's disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); GABA-ergic synapse (ortholog) NW_004955415 18210608 18915099 + 102020797 AGCD01016445;AGCD01016446;AGCD01016447;AGCD01016448;AGCD01016449;AGCD01016450;AGCD01016451;AGCD01016452;AGCD01016453;AGCD01016454;AGCD01016455;AGCD01016456;AGCD01016457;AGCD01016458;AGCD01016459;AGCD01016460;GBCB01041065;GBDI01190271;XM_005380862 XP_005380919 MODEL 9019833 protein-coding Intu inturned planar cell polarity protein ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN cilium assembly (ortholog); embryonic digit morphogenesis (ortholog); hair follicle morphogenesis (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955428 13670756 13743030 - 102008243 AGCD01027960;AGCD01027961;AGCD01027962;GBBH01048791;XM_005386749;XM_013515336;XM_013515337 XP_005386806;XP_013370790;XP_013370791 MODEL 8834040 protein-coding Baalc BAALC binder of MAP3K1 and KLF4 ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane raft (ortholog) NW_004955417 27426764 27436620 + 102020913 AGCD01018555;AGCD01018556;GBCE01034603;GBDF01013252;XM_013512841 XP_013368295 MODEL 9007012 pseudo LOC102009982 ADP-ribosylation factor-like protein 5A NW_004955435 20926678 20927274 - 102009982 AGCD01033467 MODEL 9064024 protein-coding LOC102021376 LIM zinc-binding domain-containing Nebulette-like NW_004955429 7358758 7369645 + 102021376 AGCD01028590;AGCD01028591;GBBH01110887;GBCQ01178173;XM_005386937 XP_005386994 MODEL 9022110 protein-coding Fhl3 four and a half LIM domains 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); stress fiber (ortholog) NW_004955452 15718832 15721697 - 102016662 AGCD01044495;GBDF01276712;GBDK01320683;XM_013519692 XP_013375146 MODEL 8750555 protein-coding Kiaa1328 KIAA1328 ortholog ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955402 23298244 23591420 + 102013887 AGCD01000621;AGCD01000622;AGCD01000623;AGCD01000624;AGCD01000625;AGCD01000626;AGCD01000627;AGCD01000628;AGCD01000629;GBDF01084579;XM_005372825;XM_005372826;XM_005372827;XM_005372829;XM_005372830;XM_005372832;XM_013510276;XM_013510283;XM_013510287;XM_013510296 XP_005372882;XP_005372883;XP_005372884;XP_005372886;XP_005372887;XP_005372889;XP_013365730;XP_013365737;XP_013365741;XP_013365750 MODEL 8775736 protein-coding LOC102012342 uncharacterized LOC102012342 NW_004955504 2063804 2068813 - 102012342 AGCD01064853;GBDI01262175;GBDK01263929;XM_013505916 XP_013361370 MODEL 9032786 protein-coding Hdhd5 haloacid dehalogenase like hydrolase domain containing 5 ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955454 5284936 5294969 - 102029474 AGCD01045139;AGCD01045140;GBBH01164117;GBDJ01224094;XM_013520236;XM_013520237 XP_013375690;XP_013375691 MODEL 10255986 ncrna LOC106147098 uncharacterized LOC106147098 NW_004955518 4673408 4680733 - 106147098 AGCD01067835;GBCQ01139426;XR_001231839 MODEL 10225408 ncrna LOC106150041 uncharacterized LOC106150041 NW_004955462 2873492 2875878 - 106150041 AGCD01049189;GBBH01049625;XR_001236595;XR_001236596 MODEL 8795535 pseudo LOC102010778 60S ribosomal protein L12-like NW_004955459 3652052 3652565 + 102010778 AGCD01048015 MODEL 8708231 protein-coding Psph phosphoserine phosphatase ENCODES a protein that exhibits identical protein binding (ortholog); L-phosphoserine phosphatase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); L-serine biosynthetic process (ortholog); L-serine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); amino acid metabolic disorder (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog) NW_004955456 8198739 8212111 - 102029365 AGCD01046460;AGCD01046461;GBDF01278340;XM_005396697;XM_013520546 XP_005396754;XP_013376000 MODEL 8965356 protein-coding Got2 glutamic-oxaloacetic transaminase 2 ENCODES a protein that exhibits amino acid binding (ortholog); carboxylic acid binding (ortholog); enzyme binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); dicarboxylic acid metabolic process (ortholog); fatty acid transport (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; ASSOCIATED WITH acute kidney failure (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog) NW_004955433 16121795 16145129 - 102013328 AGCD01031786;AGCD01031787;GBBH01062044;GBDJ01075997;XM_013516232 XP_013371686 MODEL 10325948 ncrna LOC106149252 uncharacterized LOC106149252 NW_004955441 10275220 10276541 - 106149252 AGCD01037082;XR_001235299 MODEL 9007545 protein-coding Ndrg2 NDRG family member 2 INVOLVED IN negative regulation of cytokine production (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cataract (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955550 1771514 1778693 - 102030351 AGCD01072587;GBCC01012894;GBDI01017782;XM_013508572;XM_013508573 XP_013364026;XP_013364027 MODEL 39134475 misc_rna 7SK 7SK RNA 10212608 protein-coding Fam220a family with sequence similarity 220 member A ENCODES a protein that exhibits STAT family protein binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); protein dephosphorylation (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955460 13329417 13335986 + 106146247 AGCD01048680;AGCD01048681;XM_013521170 XP_013376624 MODEL 39134164 misc_rna 7SK 7SK RNA 8974590 protein-coding LOC102005196 uncharacterized LOC102005196 NW_004955448 10972348 11016806 + 102005196 AGCD01041508;AGCD01041509;AGCD01041510;GBDF01042677;XM_013518600 XP_013374054 MODEL 8707787 pseudo LOC102007358 olfactory receptor 5W2-like NW_004955511 700104 706604 - 102007358 AGCD01066338;AGCD01066339;XM_005408208 MODEL 8931203 protein-coding Asb14 ankyrin repeat and SOCS box containing 14 ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955430 7014091 7038751 - 102013959 AGCD01029331;AGCD01029332;GBBH01019933;XM_013515599 XP_013371053 MODEL 8932876 ncrna LOC102022706 uncharacterized LOC102022706 NW_004955420 19784334 19808399 - 102022706 AGCD01021067;GBDI01299026;XR_260728 MODEL 8805897 protein-coding Wdfy1 WD repeat and FYVE domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); INVOLVED IN positive regulation of toll-like receptor 3 signaling pathway (ortholog); positive regulation of toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); nucleus (ortholog) NW_004955453 10101576 10148205 + 102020198 AGCD01044782;GBDF01044991;XM_005395485 XP_005395542 MODEL 8912371 protein-coding Cs citrate synthase ENCODES a protein that exhibits acyltransferase activity, acyl groups converted into alkyl on transfer (ortholog); citrate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); carbohydrate metabolic process (ortholog); citrate metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH atrial fibrillation (ortholog); bipolar disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955458 3881798 3913044 - 102028061 AGCD01047353;GBBH01060543;XM_005397516 XP_005397573 MODEL 8969212 protein-coding Ddt D-dopachrome tautomerase ENCODES a protein that exhibits cytokine receptor binding (ortholog); D-dopachrome decarboxylase activity (ortholog); phenylpyruvate tautomerase activity (ortholog); INVOLVED IN negative regulation of macrophage chemotaxis (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of inflammatory response (ortholog); FOUND IN extracellular region (ortholog) NW_004955455 10479409 10481080 - 102004038 AGCD01045956;GBDF01000134;XM_005396485 XP_005396542 MODEL 8994347 protein-coding Hmgn2 high mobility group nucleosomal binding domain 2 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of development, heterochronic (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome type 1 (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleolus (ortholog) NW_004955452 5846085 5849996 + 102018679 AGCD01044058;AGCD01044059;GBBH01004594;XM_005394861 XP_005394918 MODEL 8788970 protein-coding Mtx1 metaxin 1 INVOLVED IN lactation (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog); SAM complex (ortholog) NW_004955545 1676292 1682106 + 102030349 AGCD01071867;GBDF01043238;XM_005411588 XP_005411645 MODEL 39132497 snrna U6 U6 spliceosomal RNA 8817270 protein-coding LOC102008841 calcyclin-binding protein-like NW_004955414 6441386 6442088 - 102008841 AGCD01014919;XM_013512070 XP_013367524 MODEL 8797367 pseudo LOC102003430 olfactory receptor 10J5-like NW_004955468 11314436 11315226 - 102003430 AGCD01052125 MODEL 8724998 pseudo LOC102023080 60S ribosomal protein L13 pseudogene NW_004955443 19809334 19809985 - 102023080 AGCD01038635 MODEL 8913231 pseudo LOC102004858 KATNB1-like protein 1 pseudogene NW_004955439 1794420 1798798 + 102004858 AGCD01035627 MODEL 8739454 protein-coding Cxxc4 CXXC finger protein 4 ENCODES a protein that exhibits methyl-CpG binding (ortholog); PDZ domain binding (ortholog); zinc ion binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); Wnt signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); nucleus (ortholog) NW_004955496 4523027 4546671 + 102011334 AGCD01062325;AGCD01062326;GBDF01114472;XM_013505373 XP_013360827 MODEL 8791905 ncrna LOC102013469 uncharacterized LOC102013469 NW_004955405 26349233 26375138 + 102013469 AGCD01005201;GBDK01414416;XR_259396 MODEL 8712147 pseudo LOC102018014 endothelial differentiation-related factor 1 pseudogene NW_004955518 3788942 3789430 - 102018014 AGCD01067809 MODEL 8870275 protein-coding Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 9759452 9793105 - 102007081 AGCD01044260;AGCD01044261;GBBH01208189;XM_005395015 XP_005395072 MODEL 8735738 protein-coding Baat bile acid-CoA:amino acid N-acyltransferase ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); choloyl-CoA hydrolase activity (ortholog); glycine N-choloyltransferase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); animal organ regeneration (ortholog); bile acid biosynthetic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); disease of metabolism (ortholog); familial hypercholanemia 1 (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) NW_004955419 24469213 24521728 + 102009722 AGCD01020347;AGCD01020348;AGCD01020349;AGCD01020350;GBCQ01123350;XM_005382802;XM_005382803 XP_005382859;XP_005382860 MODEL 8808283 protein-coding Plcb2 phospholipase C beta 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); phosphatidylinositol phospholipase C activity (ortholog); INVOLVED IN cell chemotaxis (ortholog); detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); G-protein beta/gamma-subunit complex (ortholog); neuronal dense core vesicle (ortholog) NW_004955416 7221326 7240743 - 102017866 AGCD01016970;GBDJ01275265;XM_005381228;XM_005381229;XM_005381230;XM_013512599;XM_013512600 XP_005381285;XP_005381286;XP_005381287;XP_013368053;XP_013368054 MODEL 8838365 protein-coding Gabbr2 gamma-aminobutyric acid type B receptor subunit 2 ENCODES a protein that exhibits G protein-coupled GABA receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); neuron-glial cell signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); G protein-coupled GABA receptor complex (ortholog); G protein-coupled receptor heterodimeric complex (ortholog) NW_004955419 26872734 27241917 + 102017341 AGCD01020418;AGCD01020419;AGCD01020420;AGCD01020421;AGCD01020422;AGCD01020423;AGCD01020424;AGCD01020425;AGCD01020426;AGCD01020427;GBDF01061078;XM_005382826 XP_005382883 MODEL 8895018 protein-coding Gldn gliomedin ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN clustering of voltage-gated sodium channels (ortholog); microvillus organization (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955409 3128718 3179083 - 102023122 AGCD01009235;GBCE01009115;GBDJ01030054;XM_013510288 XP_013365742 MODEL 8841152 ncrna LOC102024462 uncharacterized LOC102024462 NW_004955417 29298430 29304548 - 102024462 AGCD01018595;AGCD01018596;GBDF01180782;XR_001233401;XR_001233402 MODEL 8734928 protein-coding Kiaa1549 KIAA1549 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN photoreceptor connecting cilium (ortholog) NW_004955494 4067813 4152368 + 102009623 AGCD01061493;GBBH01207967;XM_005405541 XP_005405598 MODEL 8964989 pseudo LOC102021377 nucleosome assembly protein 1-like 1 pseudogene NW_004955429 13983451 13984153 - 102021377 AGCD01028771 MODEL 8935185 protein-coding LOC102006229 histone H2A type 1-like NW_004955465 13334742 13337254 + 102006229 AGCD01050600;AGCD01050601;XM_005399011 XP_005399068 MODEL 8838271 protein-coding Nudt15 nudix hydrolase 15 ENCODES a protein that exhibits 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (ortholog); 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity (ortholog); 8-oxo-dGDP phosphatase activity (ortholog); INVOLVED IN dGTP catabolic process (ortholog); DNA protection (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); leukopenia (ortholog); neutropenia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955431 1767971 1775555 + 102013744 AGCD01029917;GBDF01038423;XM_005387551 XP_005387608 MODEL 9006859 ncrna LOC102003067 uncharacterized LOC102003067 NW_004955438 9649804 9652236 + 102003067 AGCD01035184;GBDF01148894;XR_261923 MODEL 10366263 ncrna LOC106150042 uncharacterized LOC106150042 NW_004955462 7321314 7324829 - 106150042 AGCD01049300;XR_001236597 MODEL 8765516 pseudo LOC102007705 tumor suppressor p53-binding protein 1-like NW_004955548 2402607 2409082 + 102007705 AGCD01072395 MODEL 8779129 protein-coding Hdlbp high density lipoprotein binding protein ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear body (ortholog) NW_004955542 444221 505512 + 102008891 AGCD01071474;GBDF01002916;XM_005411130;XM_005411131;XM_005411132 XP_005411187;XP_005411188;XP_005411189 MODEL 8995005 protein-coding Pspn persephin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 3218720 3220941 + 102014686 AGCD01061838;GBCE01007404;XM_005405723 XP_005405780 MODEL 8869926 pseudo LOC102023429 Golgi-associated plant pathogenesis-related protein 1 pseudogene NW_004955405 17787571 17788068 + 102023429 AGCD01005008;XM_005374687 MODEL 8918958 protein-coding Serpini1 serpin family I member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); ASSOCIATED WITH familial encephalopathy with neuroserpin inclusion bodies (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle lumen (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955448 16947375 16982114 + 102012485 AGCD01041705;AGCD01041706;AGCD01041707;GBBH01191602;XM_005393142;XM_013518652;XM_013518653 XP_005393199;XP_013374106;XP_013374107 MODEL 8872107 ncrna LOC102009985 uncharacterized LOC102009985 NW_004955532 2292201 2295717 + 102009985 AGCD01070223;GBDF01097912;XR_264728 MODEL 8933706 protein-coding Mzt2b mitotic spindle organizing protein 2B ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); gamma-tubulin ring complex (ortholog); spindle (ortholog) NW_004955442 19211539 19221971 + 102019965 AGCD01038040;GBDF01087477;XM_005391816 XP_005391873 MODEL 8941527 ncrna LOC102005882 uncharacterized LOC102005882 NW_004955452 2251854 2256006 - 102005882 AGCD01043886;XR_262636 MODEL 626189203 mirna MIR99A microRNA 99a 39132300 rrna 5S_rRNA 5S ribosomal RNA 8737315 pseudo LOC102013471 poly(rC)-binding protein 2 pseudogene NW_004955405 1213036 1219942 - 102013471 AGCD01004598 MODEL 9028386 protein-coding Ndrg3 NDRG family member 3 INVOLVED IN decidualization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 24901975 24972033 + 102020350 AGCD01023238;AGCD01023239;GBDF01002354;XM_005384731;XM_005384732;XM_005384733;XM_013514021;XM_013514022 XP_005384788;XP_005384789;XP_005384790;XP_013369475;XP_013369476 MODEL 8955828 protein-coding Fam221a family with sequence similarity 221 member A ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog) NW_004955410 25872453 25902887 + 102017430 AGCD01011180;AGCD01011181;GBDF01046009;XM_005377406;XM_005377407;XM_005377408;XM_005377409;XM_005377410;XM_005377411 XP_005377463;XP_005377464;XP_005377465;XP_005377466;XP_005377467;XP_005377468 MODEL 39134165 misc_rna 7SK 7SK RNA 9007007 pseudo LOC102007361 uncharacterized LOC102007361 NW_004955515 1742608 1754797 - 102007361 AGCD01067234;AGCD01067235 MODEL 8809165 pseudo LOC102011948 NF-kappa-B inhibitor-interacting Ras-like protein 1 NW_004955453 11424663 11425286 - 102011948 AGCD01044807 MODEL 39131688 rrna 5S_rRNA 5S ribosomal RNA 9007408 protein-coding LOC102025127 somatostatin-like NW_004955420 20082135 20083273 + 102025127 AGCD01021071;XM_005383250 XP_005383307 MODEL 8999491 protein-coding LOC102010781 proline-rich proteoglycan 2-like NW_004955463 13403383 13407571 + 102010781 AGCD01049866;GBDI01274687;XM_005398474 XP_005398531 MODEL 8976659 trna trnN(gtt) tRNA-Asn MT 5085 5157 - 15822222 8791690 protein-coding CUNH11orf65 chromosome unknown C11orf65 homolog INVOLVED IN negative regulation of mitochondrial fission (ortholog); negative regulation of protein localization to mitochondrion (ortholog); ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955412 10533174 10567364 - 102006324 AGCD01012769;AGCD01012770;AGCD01012771;GBDI01370053;XM_005378039 XP_005378096 MODEL 8853352 protein-coding Hmgn3 high mobility group nucleosomal binding domain 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955502 7037126 7064333 - 102006595 AGCD01064428;AGCD01064429;GBCE01033304;XM_005406907;XM_005406908;XM_005406909;XM_005406911;XM_013505836;XM_013505837;XM_013505838 XP_005406964;XP_005406965;XP_005406966;XP_005406968;XP_013361290;XP_013361291;XP_013361292 MODEL 8758411 protein-coding Bhlhe40 basic helix-loop-helix family member e40 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH advanced sleep phase syndrome (ortholog); bipolar disorder (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955421 8463337 8468877 - 102018503 AGCD01021814;GBBH01119101;XM_005383740 XP_005383797 MODEL 8777412 ncrna LOC102004861 uncharacterized LOC102004861 NW_004955553 760578 769863 + 102004861 AGCD01072863;AGCD01072864;GBDF01279699;XR_001232281;XR_264931 MODEL 8744226 protein-coding Invs inversin INVOLVED IN animal organ development (ortholog); embryonic heart tube left/right pattern formation (ortholog); epithelial cilium movement involved in determination of left/right asymmetry (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ciliary base (ortholog); ciliary inversin compartment (ortholog); cilium (ortholog) NW_004955419 25445404 25584244 - 102011666 AGCD01020385;AGCD01020386;AGCD01020387;AGCD01020388;GBDF01113701;XM_005382808;XM_005382810;XM_013513189 XP_005382865;XP_005382867;XP_013368643 MODEL 39134476 misc_rna 7SK 7SK RNA 8883236 protein-coding Gp1ba glycoprotein Ib platelet subunit alpha INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); cell adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH autoimmune thrombocytopenic purpura (ortholog); bacterial pneumonia (ortholog); Bernard-Soulier syndrome (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); glycoprotein Ib-IX-V complex (ortholog) NW_004955467 10333537 10347488 + 102020435 AGCD01051560;AGCD01051561;GBBH01027297;XM_005399617;XM_013522074 XP_005399674;XP_013377528 MODEL 8882684 protein-coding LOC102005199 small integral membrane protein 15-like NW_004955588 770792 771016 + 102005199 AGCD01076122;XM_005414524 XP_005414581 MODEL 8713381 ncrna LOC102012343 uncharacterized LOC102012343 NW_004955427 8525675 8532142 - 102012343 AGCD01027075;GBDF01226078;XR_261241 MODEL 10340616 ncrna LOC106147099 uncharacterized LOC106147099 NW_004955518 2220337 2275347 + 106147099 AGCD01067772;AGCD01067773;AGCD01067774;AGCD01067775;GBDF01041824;XR_001231849 MODEL 8841111 protein-coding LOC102021378 olfactory receptor 4A15-like NW_004955511 55303 56220 - 102021378 AGCD01066312;XM_005408175 XP_005408232 MODEL 8957589 protein-coding LOC102022711 cardiotrophin-2 NW_004955493 7741380 7747696 - 102022711 AGCD01061223;GBDI01041162;XM_005405279 XP_005405336 MODEL 8825216 protein-coding Wdfy2 WD repeat and FYVE domain containing 2 INVOLVED IN positive regulation of fat cell differentiation (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955431 4809405 5086647 + 102030224 AGCD01030011;AGCD01030012;AGCD01030013;AGCD01030014;GBDF01161721;XM_005387605;XM_005387606;XM_005387607;XM_013515761;XM_013515762;XM_013515763;XR_261449 XP_005387662;XP_005387663;XP_005387664;XP_013371215;XP_013371216;XP_013371217 MODEL 39132498 snrna U6 U6 spliceosomal RNA 8709846 protein-coding Nudt16 nudix hydrolase 16 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); chloride ion binding (ortholog); cobalt ion binding (ortholog); INVOLVED IN chromosome organization (ortholog); dITP catabolic process (ortholog); mRNA catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955501 7083068 7085505 - 102009297 AGCD01064204;GBDF01144639;XM_005406842 XP_005406899 MODEL 8983855 protein-coding LOC102008843 olfactory receptor 52N4-like NW_004955414 21721245 21722210 + 102008843 AGCD01015429;XM_005380501 XP_005380558 MODEL 8807163 pseudo LOC102003433 heterogeneous nuclear ribonucleoprotein A1-like NW_004955469 9146985 9148365 + 102003433 AGCD01052493 MODEL 8853225 ncrna LOC102007708 uncharacterized LOC102007708 NW_004955443 5130686 5141731 - 102007708 AGCD01038232;GBCB01015177;XR_262176 MODEL 9034106 protein-coding Hdx highly divergent homeobox ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955529 3468132 3642886 - 102021795 AGCD01069795;AGCD01069796;AGCD01069797;AGCD01069798;AGCD01069799;AGCD01069800;GBDF01022935;XM_005410080 XP_005410137 MODEL 8728599 protein-coding LOC102023082 cytochrome c oxidase subunit 6B2 INVOLVED IN ATP biosynthetic process (ortholog); cell differentiation (ortholog); oxygen metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); sarcoma (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrion (ortholog) NW_004955567 890281 891675 + 102023082 AGCD01074444;AGCD01074445;GBDF01085437;XM_005413321 XP_005413378 MODEL 9054681 protein-coding Snrnp48 small nuclear ribonucleoprotein U11/U12 subunit 48 ASSOCIATED WITH acute myeloid leukemia (ortholog); Carvajal syndrome (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog); U11/U12 snRNP (ortholog) NW_004955465 6339362 6353563 - 102027391 AGCD01050441;GBDJ01316518;XM_005398851 XP_005398908 MODEL 8842899 protein-coding Babam1 BRISC and BRCA1 A complex member 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); hematopoietic stem cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955524 939250 944457 - 102005169 AGCD01068730;GBCE01029546;XM_005409520;XM_005409521;XM_005409522;XM_005409523 XP_005409577;XP_005409578;XP_005409579;XP_005409580 MODEL 8851668 protein-coding Asb15 ankyrin repeat and SOCS box containing 15 ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); renal cell carcinoma (ortholog) NW_004955479 5082941 5130419 + 102013412 AGCD01056340;GBDF01152943;XM_005402327;XM_005402328;XM_005402329;XM_005402331;XM_005402332;XM_005402333;XM_005402334 XP_005402384;XP_005402385;XP_005402386;XP_005402388;XP_005402389;XP_005402390;XP_005402391 MODEL 8869301 protein-coding N4bp1 NEDD4 binding protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); RNA nuclease activity (ortholog); ubiquitin binding (ortholog); INVOLVED IN cellular response to UV (ortholog); negative regulation of cytokine production (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955474 6796068 6814906 + 102004924 AGCD01054496;GBBH01228148;GBDK01136514;XM_005401391;XM_005401393;XM_005401394;XM_005401396;XM_005401397;XM_013502760;XM_013502761 XP_005401448;XP_005401450;XP_005401451;XP_005401453;XP_005401454;XP_013358214;XP_013358215 MODEL 8833138 protein-coding LOC102013474 translation initiation factor IF-2-like NW_004955407 18942404 19075796 + 102013474 AGCD01007290;AGCD01007291;AGCD01007292;AGCD01007293;AGCD01007294;GBDF01304388;XM_013505824 XP_013361278 MODEL 8725840 protein-coding Serpini2 serpin family I member 2 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955448 16679885 16694484 - 102027247 AGCD01041701;GBBH01104730;XM_005393166 XP_005393223 MODEL 8849313 protein-coding LOC102023431 receptor-type tyrosine-protein phosphatase V-like NW_004955406 38253569 38273082 + 102023431 AGCD01006599;GBDF01088796;XM_005375209;XM_013522347;XM_013522350 XP_005375266;XP_013377801;XP_013377804 MODEL 8820965 protein-coding LOC102006233 olfactory receptor 10J4-like NW_004955468 11106424 11107365 - 102006233 AGCD01052114;XM_005400170 XP_005400227 MODEL 8868564 ncrna LOC102003068 uncharacterized LOC102003068 NW_004955439 1703273 1722660 - 102003068 AGCD01035626;GBDF01124953;XR_001235210;XR_261961 MODEL 8909781 protein-coding Gabpa GA binding protein transcription factor subunit alpha ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); ERBB signaling pathway (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 25609840 25641886 + 102017537 AGCD01007512;AGCD01007513;AGCD01007514;GBDF01159971;XM_005375587;XM_013503896;XM_013503907 XP_005375644;XP_013359350;XP_013359361 MODEL 8948943 protein-coding Kiaa1549l KIAA1549 like ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955422 12554879 12676904 - 102021772 AGCD01022796;AGCD01022797;GBDF01187516;XM_013514325;XM_013514326 XP_013369779;XP_013369780 MODEL 8921784 protein-coding Ndrg4 NDRG family member 4 INVOLVED IN cell migration involved in heart development (ortholog); negative regulation of platelet-derived growth factor receptor signaling pathway (ortholog); negative regulation of smooth muscle cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); glioblastoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell projection membrane (ortholog); cytoplasm (ortholog) NW_004955433 15914884 15933000 + 102012889 AGCD01031775;AGCD01031776;GBCQ01003722;XM_005388444;XM_005388445;XM_013516126 XP_005388501;XP_005388502;XP_013371580 MODEL 39131689 rrna 5S_rRNA 5S ribosomal RNA 8812140 protein-coding Plcb3 phospholipase C beta 3 ENCODES a protein that exhibits calmodulin binding (ortholog); G-protein beta-subunit binding (ortholog); G-protein gamma-subunit binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); inositol trisphosphate metabolic process (ortholog); phosphatidylinositol catabolic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic ulcer of skin (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of membrane (ortholog); cytosol (ortholog) NW_004955422 20810871 20827267 - 102017247 AGCD01023089;AGCD01023090;GBDF01280248;GBDK01071508;XM_005384625 XP_005384682 MODEL 8782871 protein-coding Csad cysteine sulfinic acid decarboxylase ENCODES a protein that exhibits aspartate 1-decarboxylase activity (ortholog); sulfinoalanine decarboxylase activity (ortholog); INVOLVED IN L-cysteine catabolic process (ortholog); taurine biosynthetic process (ortholog); PARTICIPATES IN taurine and hypotaurine metabolic pathway; transsulfuration pathway of homocysteine metabolism; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955458 423156 449763 - 102014644 AGCD01047125;AGCD01047126;AGCD01047127;GBCB01087240;XM_005397155;XM_005397156;XM_005397157;XM_005397158;XM_005397159;XM_005397160;XM_013520947;XM_013520948;XM_013520949 XP_005397212;XP_005397213;XP_005397214;XP_005397215;XP_005397216;XP_005397217;XP_013376401;XP_013376402;XP_013376403 MODEL 8779865 pseudo LOC102007362 ATM interactor pseudogene NW_004955516 35910 38266 + 102007362 AGCD01067367 MODEL 10110824 ncrna LOC106149253 uncharacterized LOC106149253 NW_004955441 6541339 6542524 + 106149253 AGCD01036929;GBDF01009214;XR_001235302 MODEL 8843790 protein-coding Mtx2 metaxin 2 INVOLVED IN mitochondrial transport (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Growth Disorders (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); SAM complex (ortholog) NW_004955403 20359524 20412473 - 102010013 AGCD01002155;GBCQ01077671;XM_005373410;XM_013512767 XP_005373467;XP_013368221 MODEL 8966608 protein-coding Ddx1 DEAD-box helicase 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); chromatin binding (ortholog); DNA/RNA helicase activity (ortholog); INVOLVED IN double-strand break repair (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of myeloid dendritic cell cytokine production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cleavage body (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955487 9085950 9117599 + 102012333 AGCD01059450;AGCD01059451;GBDF01005751;XM_005404443 XP_005404500 MODEL 8787326 protein-coding LOC102025135 epithelial chloride channel protein-like NW_004955423 7433747 7456786 - 102025135 AGCD01023601;AGCD01023602;AGCD01023603;GBDF01286325;XM_005385357 XP_005385414 MODEL 8873012 ncrna LOC102018016 uncharacterized LOC102018016 NW_004955433 19172341 19176616 + 102018016 AGCD01031860;XR_261599 MODEL 10073919 protein-coding LOC106150043 uncharacterized LOC106150043 NW_004955462 7356342 7442399 + 106150043 AGCD01049302;AGCD01049303;AGCD01049304;AGCD01049305;GBDF01308303;XM_013521415;XM_013521416;XM_013521417;XM_013521418;XR_001236598;XR_001236599;XR_001236600;XR_001236601 XP_013376869;XP_013376870;XP_013376871;XP_013376872 MODEL 8781423 protein-coding Cxxc5 CXXC finger protein 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of generation of precursor metabolites and energy (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955418 932198 965894 - 102013719 AGCD01018694;AGCD01018695;GBDK01075972;XM_005382053;XM_005382054;XM_005382055;XM_005382056;XM_005382057;XM_013512966 XP_005382110;XP_005382111;XP_005382112;XP_005382113;XP_005382114;XP_013368420 MODEL 39132499 snrna U6 U6 spliceosomal RNA 8745055 protein-coding Fhl5 four and a half LIM domains 5 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH migraine (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955411 22583314 22619281 + 102018370 AGCD01012095;GBDF01008124;XM_005377785;XM_005377787;XM_013510707 XP_005377842;XP_005377844;XP_013366161 MODEL 8848615 protein-coding Psrc1 proline and serine rich coiled-coil 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); mitotic metaphase chromosome alignment (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955435 12697179 12702021 - 102025719 AGCD01033162;GBDK01264620;XM_013516446;XM_013516447;XM_013516448;XM_013516449;XM_013516450;XM_013516451;XM_013516452;XM_013516453 XP_013371900;XP_013371901;XP_013371902;XP_013371903;XP_013371904;XP_013371905;XP_013371906;XP_013371907 MODEL 8782666 ncrna LOC102005885 uncharacterized LOC102005885 NW_004955405 12185694 12195667 + 102005885 AGCD01004849;GBDF01147002;XR_259373 MODEL 8906261 protein-coding Gp1bb glycoprotein Ib platelet subunit beta ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Bernard-Soulier syndrome (ortholog); carotid artery thrombosis (ortholog); congenital heart disease (ortholog); FOUND IN glycoprotein Ib-IX-V complex (ortholog) NW_004955442 18359664 18360979 - 102005849 AGCD01038004;GBCC01043861;XM_005391771;XM_005391772 XP_005391828;XP_005391829 MODEL 626189204 mirna MIRLET7A1 microRNA let-7a-1 8844418 ncrna LOC102024464 uncharacterized LOC102024464 NW_004955419 14164557 14168244 - 102024464 AGCD01020013;GBDJ01026578;XR_001233568 MODEL 8897347 protein-coding Ip6k1 inositol hexakisphosphate kinase 1 ENCODES a protein that exhibits inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955532 1625298 1644973 - 102018435 AGCD01070196;GBCE01052322;XM_013507604;XM_013507605;XM_013507606 XP_013363058;XP_013363059;XP_013363060 MODEL 8976105 ncrna LOC102011951 uncharacterized LOC102011951 NW_004955455 571092 575802 - 102011951 AGCD01045562;XR_262804;XR_262805 MODEL 8932625 protein-coding Fam221b family with sequence similarity 221 member B ASSOCIATED WITH stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955472 489530 497224 + 102003960 AGCD01053339;GBDF01002811;XM_005400987;XM_005400988 XP_005401044;XP_005401045 MODEL 8911052 trna trnP(tgg) tRNA-Pro MT 15374 15440 - 15822235 8919326 protein-coding Wdfy3 WD repeat and FYVE domain containing 3 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN aggrephagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) NW_004955474 4764902 5045421 + 102025904 AGCD01054386;AGCD01054387;AGCD01054388;AGCD01054389;AGCD01054390;AGCD01054391;AGCD01054392;GBDK01190489;XM_005401374;XM_013502725;XM_013502726;XM_013502727;XM_013502728;XM_013502729;XM_013502730 XP_005401431;XP_013358179;XP_013358180;XP_013358181;XP_013358182;XP_013358183;XP_013358184 MODEL 9042431 protein-coding LOC102010782 cytochrome P450 4A6-like NW_004955464 11443634 11459566 + 102010782 AGCD01050154;GBCQ01010107;XM_005398643 XP_005398700 MODEL 8711921 protein-coding LOC102008850 centromere protein Q-like NW_004955481 3368425 3369339 + 102008850 AGCD01056902;XM_013503357 XP_013358811 MODEL 8827124 protein-coding Nudt16l1 nudix hydrolase 16 like 1 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); protein homodimerization activity (ortholog); snoRNA binding (ortholog); INVOLVED IN negative regulation of double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955442 12761962 12777549 - 102005307 AGCD01037745;GBDI01155744;XM_005391273;XM_005391274;XM_005391275;XM_013517719;XM_013517720 XP_005391330;XP_005391331;XP_005391332;XP_013373173;XP_013373174 MODEL 8701326 protein-coding LOC102018017 olfactory receptor 2J3-like NW_004955524 45694 46627 + 102018017 AGCD01068663;XM_013507226 XP_013362680 MODEL 9011031 protein-coding LOC102009987 trem-like transcript 4 protein NW_004955437 7799753 7806865 - 102009987 AGCD01034469;GBBH01047078;XM_005389681;XM_013517047;XM_013517048 XP_005389738;XP_013372501;XP_013372502 MODEL 39134166 misc_rna 7SK 7SK RNA 8964609 pseudo LOC102005201 phosphatase and actin regulator 4 pseudogene NW_004955591 755440 812129 - 102005201 AGCD01076284;AGCD01076285;AGCD01076286 MODEL 9012290 protein-coding Gle1 GLE1 RNA export mediator PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); Congenital Arthrogryposis with Anterior Horn Cell Disease (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955570 970267 1004525 + 102029913 AGCD01074778;AGCD01074779;AGCD01074780;AGCD01074781;GBDF01046533;XM_005413557;XM_005413558 XP_005413614;XP_005413615 MODEL 9065668 pseudo LOC102012344 protein AMN1 homolog pseudogene NW_004955505 4070700 4071337 + 102012344 AGCD01065083;XR_264308 MODEL 39131690 rrna 5S_rRNA 5S ribosomal RNA 8855709 protein-coding LOC102023438 olfactory receptor 6C2-like NW_004955458 2992715 2993662 + 102023438 AGCD01047264;XM_005397506 XP_005397563 MODEL 8741834 protein-coding LOC102022719 zinc finger protein 14-like NW_004955499 360968 399537 - 102022719 AGCD01063222;AGCD01063223;AGCD01063224;AGCD01063225;AGCD01063226;AGCD01063227;AGCD01063228;GBDF01234193;XM_013505549 XP_013361003 MODEL 8701332 protein-coding Csdc2 cold shock domain containing C2 ENCODES a protein that exhibits RNA binding (ortholog); transcription factor binding (ortholog); ASSOCIATED WITH stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955413 27079280 27090082 + 102020234 AGCD01014491;AGCD01014492;GBCE01171981;XM_005379354 XP_005379411 MODEL 9066457 protein-coding Bhlhe41 basic helix-loop-helix family member e41 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); Familial Natural Short Sleep 1 (ortholog) NW_004955413 21100021 21103358 - 102004268 AGCD01014246;GBCB01005694;GBCQ01007548;XM_013511397 XP_013366851 MODEL 39134477 misc_rna 7SK 7SK RNA 8708820 protein-coding LOC102025137 melanoma-associated antigen 10-like NW_004955498 4797137 4797895 + 102025137 AGCD01063020;GBDF01246816;XM_005406487 XP_005406544 MODEL 8866371 protein-coding CUNH11orf71 chromosome unknown C11orf71 homolog NW_004955412 15995551 15996159 - 102012415 AGCD01012888;GBDI01171582;XM_005415374 XP_005415431 MODEL 8797368 protein-coding LOC102003434 olfactory receptor 51M1-like NW_004955414 21278585 21279689 + 102003434 AGCD01015411;XM_013511772 XP_013367226 MODEL 8870296 protein-coding Ddx10 DEAD-box helicase 10 INVOLVED IN anterior head development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955412 10747642 11008039 + 102007871 AGCD01012785;AGCD01012786;AGCD01012787;GBDI01262879;XM_005378043 XP_005378100 MODEL 39132504 snrna U6 U6 spliceosomal RNA 8908625 pseudo LOC102023088 ferritin light chain pseudogene NW_004955446 12914277 12915113 - 102023088 AGCD01040245;XM_005392715 MODEL 10080215 protein-coding LOC106147100 tastin-like NW_004955518 200978 201787 + 106147100 AGCD01067721;GBDJ01388183;XM_013506968 XP_013362422 MODEL 9061361 protein-coding Fhod1 formin homology 2 domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of centrosome localization (ortholog); nuclear migration (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); intercalated disc (ortholog); nucleus (ortholog) NW_004955484 9380202 9396400 + 102007435 AGCD01058415;GBDK01073619;XM_005403665;XM_005403666 XP_005403722;XP_005403723 MODEL 8887401 protein-coding LOC102021380 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related-like NW_004955514 3946950 3967642 - 102021380 AGCD01067122;AGCD01067123;GBCB01073188;XM_005408817;XM_013506852;XM_013506853 XP_005408874;XP_013362306;XP_013362307 MODEL 9007603 protein-coding LOC102003071 vomeronasal type-1 receptor 4-like NW_004955558 653203 654063 + 102003071 AGCD01073381;XM_005412739 XP_005412796 MODEL 8760135 protein-coding LOC102024465 olfactory receptor 50-like NW_004955419 5591431 5598017 - 102024465 AGCD01019827;XM_005382925 XP_005382982 MODEL 8709091 protein-coding LOC102006234 apolipoprotein L2-like NW_004955413 22477358 22499340 - 102006234 AGCD01014302;GBDK01079420;XM_005379648 XP_005379705 MODEL 39134167 misc_rna 7SK 7SK RNA 9019917 protein-coding Kiaa1614 KIAA1614 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955406 20005261 20038783 + 102012496 AGCD01006096;GBBH01197770;GBDF01155976;XM_005374988 XP_005375045 MODEL 8857438 protein-coding Ip6k2 inositol hexakisphosphate kinase 2 ENCODES a protein that exhibits flavonoid binding (ortholog); inositol hexakisphosphate 5-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN cellular response to flavonoid (ortholog); inositol phosphate biosynthetic process (ortholog); inositol phosphate metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955532 766577 794461 - 102003690 AGCD01070152;AGCD01070153;GBDF01252337;XM_005410169;XM_013507647;XM_013507648 XP_005410226;XP_013363101;XP_013363102 MODEL 8761940 protein-coding Gabpb1 GA binding protein transcription factor subunit beta 1 ENCODES a protein that exhibits transcription cis-regulatory region binding (ortholog); INVOLVED IN mitochondrion organization (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 3983857 4036433 + 102003625 AGCD01009270;AGCD01009271;AGCD01009272;GBBH01141496;GBDF01047440;XM_013510293 XP_013365747 MODEL 8738478 protein-coding Hmgn4 high mobility group nucleosomal binding domain 4 NW_004955483 344797 352271 - 102010906 AGCD01057606;GBDJ01086234;XM_005403275;XM_005403276;XM_005403277 XP_005403332;XP_005403333;XP_005403334 MODEL 39132304 rrna 5S_rRNA 5S ribosomal RNA 8799840 pseudo LOC102007711 26S protease regulatory subunit 10B pseudogene NW_004955444 11911103 11912271 + 102007711 AGCD01039057 MODEL 8798820 protein-coding Plcb4 phospholipase C beta 4 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of potassium ion transport (ortholog); phospholipase C-activating endothelin receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Auriculocondylar Syndrome (ortholog); Auriculocondylar Syndrome 1 (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955415 19108120 19462084 + 102021754 AGCD01016463;AGCD01016464;AGCD01016465;AGCD01016466;AGCD01016467;AGCD01016468;AGCD01016469;AGCD01016470;GBCE01136647;JN633115;XM_005380864;XM_005380865;XM_005380866;XM_013512269;XM_013512270;XM_013512271 XP_005380921;XP_005380922;XP_005380923;XP_013367723;XP_013367724;XP_013367725 MODEL 10108911 protein-coding Trnp1 TMF1 regulated nuclear protein 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); neural precursor cell proliferation (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN euchromatin (ortholog); nucleus (ortholog) NW_004955452 6335463 6341657 + 106149755 AGCD01044105;AGCD01044106;GBBH01186332;GBDF01207830;XM_013519741 XP_013375195 MODEL 8741194 ncrna LOC102023440 uncharacterized LOC102023440 NW_004955409 35463032 35471967 - 102023440 AGCD01010424;GBDF01250217;XR_259804 MODEL 39134478 misc_rna 7SK 7SK RNA 9010649 pseudo LOC102025138 ribosome-recycling factor, mitochondrial pseudogene NW_004955424 15678952 15680946 - 102025138 AGCD01024722 MODEL 9030768 protein-coding Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ENCODES a protein that exhibits RNA binding (ortholog); U1 snRNA binding (ortholog); U1 snRNP binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN lysosomal lumen (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955559 1618246 1634144 - 102024057 AGCD01073654;GBDF01045469;XM_005412908;XM_005412911 XP_005412965;XP_005412968 MODEL 9056956 pseudo LOC102005895 mitochondrial fission factor-like NW_004955455 5401970 5404213 + 102005895 AGCD01045725 MODEL 8968584 protein-coding Asb16 ankyrin repeat and SOCS box containing 16 NW_004955451 17265904 17273289 + 102006415 AGCD01043731;AGCD01043732;AGCD01043733;GBCB01003710;XM_013519058 XP_013374512 MODEL 626189169 mirna MIRLET7A2 microRNA let-7a-2 8923889 protein-coding Babam2 BRISC and BRCA1 A complex member 2 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); tumor necrosis factor receptor binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955469 9831488 10246631 + 102009707 AGCD01052517;AGCD01052518;AGCD01052519;AGCD01052520;AGCD01052521;AGCD01052522;AGCD01052523;AGCD01052524;AGCD01052525;AGCD01052526;AGCD01052527;AGCD01052528;AGCD01052529;GBCQ01036978;XM_005400518;XM_005400519;XM_013522605;XR_263443 XP_005400575;XP_005400576;XP_013378059 MODEL 8768950 protein-coding LOC102011956 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955456 13079418 13133056 - 102011956 AGCD01046578;GBDK01016339;XM_013520498;XM_013520499;XM_013520500;XM_013520502;XM_013520503;XM_013520504;XM_013520505 XP_013375952;XP_013375953;XP_013375954;XP_013375956;XP_013375957;XP_013375958;XP_013375959 MODEL 8825830 protein-coding Ndst1 N-deacetylase and N-sulfotransferase 1 ENCODES a protein that exhibits deacetylase activity (ortholog); heparan sulfate N-deacetylase activity (ortholog); heparan sulfate N-sulfotransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aorta development (ortholog); cardiac septum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 46 (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); trans-Golgi network membrane (ortholog) NW_004955415 4017142 4078927 - 102014771 AGCD01015963;AGCD01015964;GBCB01057787;GBDK01000782;XM_013512250;XM_013512251 XP_013367704;XP_013367705 MODEL 9034835 protein-coding Fam222a family with sequence similarity 222 member A INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); thymoma (ortholog) NW_004955455 8789064 8844080 - 102019140 AGCD01045910;GBCQ01092827;XM_013520493;XR_001236314 XP_013375947 MODEL 8818665 pseudo LOC102012345 coiled-coil domain-containing protein 169-like NW_004955427 322526 326614 + 102012345 AGCD01026827 MODEL 8816460 protein-coding LOC102007363 monocarboxylate transporter 1-like NW_004955435 16195389 16213361 - 102007363 AGCD01033300;AGCD01033301;GBDF01134218;XM_005388971 XP_005389028 MODEL 8920897 protein-coding Sertad1 SERTA domain containing 1 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955578 848920 852193 + 102012705 AGCD01075500;GBDF01188769;XM_005414046;XM_013509664 XP_005414103;XP_013365118 MODEL 39131691 rrna 5S_rRNA 5S ribosomal RNA 10176935 ncrna LOC106150044 uncharacterized LOC106150044 NW_004955406 21066788 21090380 - 106150044 AGCD01006116;AGCD01006117;GBDI01283220;XR_001236604;XR_001236605;XR_001236606 MODEL 9057200 protein-coding Heatr1 HEAT repeat containing 1 INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955492 3627889 3672269 + 102017462 AGCD01060699;GBDF01127751;XM_005404930;XM_005404931 XP_005404987;XP_005404988 MODEL 8778209 protein-coding LOC102008851 solute carrier family 7 member 13-like NW_004955417 3044836 3065300 + 102008851 AGCD01017903;XM_013512697 XP_013368151 MODEL 8904569 pseudo LOC102010786 sodium- and chloride-dependent creatine transporter 1 pseudogene NW_004955412 1303340 1305225 + 102010786 AGCD01012514;XM_005378613 MODEL 8822172 protein-coding Pstk phosphoseryl-tRNA kinase ENCODES a protein that exhibits L-seryl-tRNA(Sec) kinase activity (ortholog); seryl-selenocysteinyl-tRNA kinase activity (ortholog); tRNA binding (ortholog); INVOLVED IN selenium compound metabolic process (ortholog); selenocysteine incorporation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955477 1147596 1157755 + 102024458 AGCD01055503;GBDF01039234;XM_005401952 XP_005402009 MODEL 8954226 pseudo LOC102003435 olfactory receptor 2AG2-like NW_004955414 22564831 22565788 - 102003435 AGCD01015463 MODEL 9039698 protein-coding Gp2 glycoprotein 2 ENCODES a protein that exhibits antigen binding (ortholog); INVOLVED IN antigen transcytosis by M cells in mucosal-associated lymphoid tissue (ortholog); ASSOCIATED WITH Body Weight (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); external side of plasma membrane (ortholog) NW_004955442 3963837 3981154 - 102013010 AGCD01037517;GBDI01022076;XM_005391123 XP_005391180 MODEL 8883826 protein-coding LOC102009989 putative uncharacterized protein encoded by LINC00521 NW_004955438 16063238 16071161 + 102009989 AGCD01035395;GBDF01002712;XM_005390358;XM_005390359;XM_005390360;XM_005390361;XM_005390362 XP_005390415;XP_005390416;XP_005390417;XP_005390418;XP_005390419 MODEL 8886272 ncrna LOC102005202 uncharacterized LOC102005202 NW_004955599 391655 395193 + 102005202 AGCD01076643;AGCD01076644;GBCB01040783;XR_001232557;XR_001232558 MODEL 8818526 pseudo LOC102004862 zinc finger protein 649-like NW_004955558 601767 612080 + 102004862 AGCD01073377 MODEL 9000875 protein-coding Mtx3 metaxin 3 ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955425 21174432 21182643 + 102010923 AGCD01025783;GBDF01003897;XM_005386005;XM_005386006 XP_005386062;XP_005386063 MODEL 626189213 mirna MIRLET7A3 microRNA let-7a-3 9055912 ncrna LOC102024466 uncharacterized LOC102024466 NW_004955420 11291287 11311386 - 102024466 AGCD01020801;GBDF01114691;XR_260704 MODEL 8881983 protein-coding Fhod3 formin homology 2 domain containing 3 INVOLVED IN actin filament network formation (ortholog); cardiac myofibril assembly (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN sarcomere (ortholog); striated muscle thin filament (ortholog) NW_004955402 22822060 23277993 + 102011489 AGCD01000613;AGCD01000614;AGCD01000615;AGCD01000616;AGCD01000617;AGCD01000618;AGCD01000619;AGCD01000620;AGCD01000621;GBCQ01095975;XM_005372817;XM_005372818;XM_005372820;XM_005372821;XM_005372822;XM_005372823;XM_005372824;XM_013510258;XM_013510260 XP_005372874;XP_005372875;XP_005372877;XP_005372878;XP_005372879;XP_005372880;XP_005372881;XP_013365712;XP_013365714 MODEL 8964662 protein-coding LOC102006239 olfactory receptor 51J1-like NW_004955414 21313687 21314640 + 102006239 AGCD01015412;XM_005380495 XP_005380552 MODEL 8765013 protein-coding Cybb cytochrome b-245 beta chain ENCODES a protein that exhibits electron transfer activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Binge Drinking (ortholog); brain infarction (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); NADPH oxidase complex (ortholog) NW_004955587 781533 818149 + 102012042 AGCD01076070;GBDI01225603;XM_005414451 XP_005414508 MODEL 39134168 misc_rna 7SK 7SK RNA 8936139 protein-coding Wdfy4 WDFY family member 4 INVOLVED IN antigen processing and presentation (ortholog); CD8-positive, alpha-beta T cell activation (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955556 1178970 1421139 - 102004981 AGCD01073187;AGCD01073188;AGCD01073189;AGCD01073190;AGCD01073191;AGCD01073192;AGCD01073193;AGCD01073194;GBDK01194697;XM_013508790;XM_013508791;XM_013508792;XM_013508793;XM_013508794;XM_013508795;XM_013508796;XM_013508797;XM_013508798 XP_013364244;XP_013364245;XP_013364246;XP_013364247;XP_013364248;XP_013364249;XP_013364250;XP_013364251;XP_013364252 MODEL 8792115 protein-coding Csde1 cold shock domain containing E1 ENCODES a protein that exhibits lncRNA binding (ortholog); RISC complex binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); IRES-dependent viral translational initiation (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN CRD-mediated mRNA stability complex (ortholog); cytosol (ortholog); mCRD-mediated mRNA stability complex (ortholog) NW_004955435 18009228 18050329 - 102020838 AGCD01033381;AGCD01033382;AGCD01033383;GBCB01003066;XM_005389008;XM_005389009;XM_005389010;XM_005389011 XP_005389065;XP_005389066;XP_005389067;XP_005389068 MODEL 8720450 protein-coding Bhmt betaine--homocysteine S-methyltransferase ENCODES a protein that exhibits betaine-homocysteine S-methyltransferase activity (ortholog); identical protein binding (ortholog); methyltransferase activity (ortholog); INVOLVED IN amino-acid betaine metabolic process (ortholog); L-methionine biosynthetic process (ortholog); L-methionine salvage (ortholog); PARTICIPATES IN choline metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); cerebral infarction (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); extracellular exosome (ortholog); extracellular region (ortholog) NW_004955425 21992219 22009389 - 102013102 AGCD01025810;AGCD01025811;AGCD01025812;GBCQ01010786;XM_005386012 XP_005386069 MODEL 8789158 protein-coding Nudt17 nudix hydrolase 17 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); INVOLVED IN RNA decapping (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); lung cancer (ortholog) NW_004955568 236943 240273 - 102005523 AGCD01074506;GBDF01085324;XM_005413434;XM_005413435;XM_013509334 XP_005413491;XP_005413492;XP_013364788 MODEL 8961756 protein-coding Sertad2 SERTA domain containing 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955424 19683745 19797889 + 102007134 AGCD01024833;AGCD01024834;AGCD01024835;AGCD01024836;AGCD01024837;GBDK01430460;XM_005385696;XM_005385698 XP_005385753;XP_005385755 MODEL 8780735 protein-coding LOC102007712 basic proline-rich protein-like NW_004955445 2689893 2693822 - 102007712 AGCD01039361;GBDF01211368;XM_005392263;XR_001235561;XR_262297 XP_005392320 MODEL 9067089 protein-coding N4bp2 NEDD4 binding protein 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, non-stop decay (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog) NW_004955443 7295066 7435761 - 102020619 AGCD01038275;AGCD01038276;AGCD01038277;AGCD01038278;AGCD01038279;AGCD01038280;AGCD01038281;AGCD01038282;AGCD01038283;GBDJ01380096;XM_005391964;XM_013518094;XM_013518095;XM_013518096;XM_013518097;XM_013518098;XM_013518099 XP_005392021;XP_013373548;XP_013373549;XP_013373550;XP_013373551;XP_013373552;XP_013373553 MODEL 39134479 misc_rna 7SK 7SK RNA 8839415 protein-coding Glg1 golgi glycoprotein 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); negative regulation of protein processing (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular matrix (ortholog); Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) NW_004955484 2871390 2987913 + 102026426 AGCD01058144;AGCD01058145;AGCD01058146;AGCD01058147;AGCD01058148;GBDJ01011078;XM_005403463 XP_005403520 MODEL 9011591 protein-coding Ddx11 DEAD/H-box helicase 11 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN cellular response to bleomycin (ortholog); cellular response to cisplatin (ortholog); cellular response to hydroxyurea (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955524 1932988 1957231 + 102004000 AGCD01068787;GBDF01123175;GBDF01123187;XM_013507302;XM_013507303 XP_013362756;XP_013362757 MODEL 8755060 pseudo LOC102023090 protein N-terminal glutamine amidohydrolase pseudogene NW_004955449 3894076 3895493 + 102023090 AGCD01041870 MODEL 8740818 pseudo LOC102003437 probable asparagine--tRNA ligase, mitochondrial pseudogene NW_004955414 18585477 18586305 + 102003437 AGCD01015285 MODEL 8977932 protein-coding LOC102021383 zinc finger protein 490-like NW_004955524 1463424 1483515 + 102021383 AGCD01068752;AGCD01068753;AGCD01068754;GBCE01072813;GBDI01292151;XM_005409482 XP_005409539 MODEL 8743600 ncrna LOC102011960 uncharacterized LOC102011960 NW_004955459 5331828 5338432 - 102011960 AGCD01048044;XR_263016 MODEL 8722502 pseudo LOC102007365 double-stranded RNA-binding protein Staufen homolog 1 pseudogene NW_004955530 1457860 1459504 - 102007365 AGCD01069884;XR_264702 MODEL 8944601 pseudo LOC102012346 protein FAM184A pseudogene NW_004955428 4406203 4408237 + 102012346 AGCD01027690 MODEL 8906359 protein-coding Bacc1 BPTF associated chromatin complex component 1 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN MLL1 complex (ortholog); NURF complex (ortholog) NW_004955467 9911925 9914811 - 102008931 AGCD01051535;GBDJ01083783;XM_013522103;XM_013522104;XM_013522105;XM_013522106;XM_013522107;XM_013522108;XM_013522109 XP_013377557;XP_013377558;XP_013377559;XP_013377560;XP_013377561;XP_013377562;XP_013377563 MODEL 8728941 protein-coding Kiaa1671 KIAA1671 ortholog ASSOCIATED WITH colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cilium (ortholog) NW_004955455 53731 193113 - 102010024 AGCD01045552;AGCD01045553;GBDF01281582;XM_005396132;XM_013520403;XM_013520404;XM_013520405;XM_013520406 XP_005396189;XP_013375857;XP_013375858;XP_013375859;XP_013375860 MODEL 8835788 protein-coding Gabpb2 GA binding protein transcription factor subunit beta 2 ENCODES a protein that exhibits identical protein binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955588 439822 477159 + 102022346 AGCD01076110;AGCD01076111;AGCD01076112;GBBH01106926;GBDF01144210;XM_005414484;XM_005414485;XM_005414486 XP_005414541;XP_005414542;XP_005414543 MODEL 9052207 protein-coding Hmgn5 high mobility group nucleosome binding domain 5 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN chromatin organization (ortholog); glutathione metabolic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophagus squamous cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955529 1118706 1125596 - 102018970 AGCD01069674;GBDJ01020931;GBDK01082669;XM_005410073;XM_013507540 XP_005410130;XP_013362994 MODEL 8754161 ncrna LOC102013482 uncharacterized LOC102013482 NW_004955410 30652472 30654572 + 102013482 AGCD01011311;GBDF01251645;XR_001232753 MODEL 8912451 trna trnQ(ttg) tRNA-Gln MT 3745 3815 - 15822236 39134169 misc_rna 7SK 7SK RNA 9012887 pseudo LOC102023445 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955460 12857980 12860166 + 102023445 AGCD01048664 MODEL 9034662 protein-coding Plcd1 phospholipase C delta 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to calcium ion (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH alopecia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955421 4856366 4880309 - 102012763 AGCD01021703;AGCD01021704;GBCE01115444;XM_005383723;XM_005383724;XM_005383725 XP_005383780;XP_005383781;XP_005383782 MODEL 8988791 protein-coding Wdhd1 WD repeat and HMG-box DNA binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); RNA binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); regulation of chromosome organization (ortholog); RNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleoplasm (ortholog) NW_004955409 8539617 8587537 + 102028723 AGCD01009420;GBDF01249434;XM_005376757;XM_005376758 XP_005376814;XP_005376815 MODEL 8943506 protein-coding LOC102025141 taste receptor type 2 member 1-like NW_004955504 6888806 6889702 - 102025141 AGCD01064930;XM_005407092 XP_005407149 MODEL 10337365 ncrna LOC106147101 uncharacterized LOC106147101 NW_004955518 3109911 3113667 - 106147101 AGCD01067793;GBDF01035276;XR_001231853 MODEL 8826626 protein-coding LOC102010789 histone H1.0 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN chromosome condensation (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); euchromatin (ortholog) NW_004955413 24182547 24184588 + 102010789 AGCD01014355;GBBH01030914;XM_005379227 XP_005379284 MODEL 8751576 protein-coding Nudt18 nudix hydrolase 18 ENCODES a protein that exhibits 8-hydroxy-dADP phosphatase activity (ortholog); 8-oxo-dGDP phosphatase activity (ortholog); 8-oxo-GDP phosphatase activity (ortholog); INVOLVED IN dADP catabolic process (ortholog); dGDP catabolic process (ortholog); GDP catabolic process (ortholog); ASSOCIATED WITH stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) NW_004955403 45598813 45601940 - 102003082 AGCD01002824;GBBH01164592;XM_005373646 XP_005373703 MODEL 8756380 protein-coding Pstpip1 proline-serine-threonine phosphatase interacting protein 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); protein phosphatase binding (ortholog); ASSOCIATED WITH acne (ortholog); allergic contact dermatitis (ortholog); allergic rhinitis (ortholog); FOUND IN actomyosin contractile ring (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955450 1876553 1908269 + 102019551 AGCD01042371;GBDK01231269;XM_005393478;XM_005393479;XM_005393481;XM_013519024 XP_005393535;XP_005393536;XP_005393538;XP_013374478 MODEL 8803201 protein-coding LOC102022725 prostaglandin-E(2) 9-reductase-like NW_004955429 451636 466116 + 102022725 AGCD01028351;AGCD01028352;AGCD01028353;AGCD01028354;GBCQ01003437;XM_005386854 XP_005386911 MODEL 8734984 protein-coding N4bp2l1 NEDD4 binding protein 2 like 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955431 13437902 13446527 + 102011351 AGCD01030308;GBBH01228888;XM_005387714;XM_013515888 XP_005387771;XP_013371342 MODEL 8746242 protein-coding Ndst2 N-deacetylase and N-sulfotransferase 2 ENCODES a protein that exhibits deacetylase activity (ortholog); heparan sulfate N-deacetylase activity (ortholog); heparan sulfate N-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); mast cell mediated immunity (ortholog); regulation of angiotensin levels in blood (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); thymoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955437 18090198 18099328 + 102011044 AGCD01034774;GBDI01221071;XM_005389955;XM_013516749 XP_005390012;XP_013372203 MODEL 9063343 protein-coding Fam222b family with sequence similarity 222 member B ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955481 4334174 4406528 + 102020116 AGCD01056935;AGCD01056936;GBDF01121302;XM_005402710;XM_005402711;XM_005402712;XM_005402713 XP_005402767;XP_005402768;XP_005402769;XP_005402770 MODEL 39132307 rrna 5S_rRNA 5S ribosomal RNA 8798755 protein-coding LOC102018018 calcium-binding mitochondrial carrier protein SCaMC-1-like NW_004955435 11949742 12009579 - 102018018 AGCD01033128;AGCD01033129;GBDF01155495;XM_005388828;XM_013516552;XM_013516554;XM_013516555 XP_005388885;XP_013372006;XP_013372008;XP_013372009 MODEL 9023746 ncrna LOC102023093 uncharacterized LOC102023093 NW_004955402 46979980 47001260 + 102023093 AGCD01001170;GBDF01162629;XR_259095;XR_259096 MODEL 9011363 pseudo LOC102021386 serine/threonine-protein phosphatase 4 regulatory subunit 3B pseudogene NW_004955531 3483082 3485616 + 102021386 AGCD01070075;XM_005410142 MODEL 39132505 snrna U6 U6 spliceosomal RNA 8863113 protein-coding LOC102005897 keratin-associated protein 10-11-like NW_004955407 41627363 41628512 + 102005897 AGCD01007874;XM_005375888 XP_005375945 MODEL 8708333 ncrna LOC102008854 uncharacterized LOC102008854 NW_004955418 25551560 25572621 - 102008854 AGCD01019367;GBDF01180351;XR_260584 MODEL 8853396 protein-coding CUNH11orf87 chromosome unknown C11orf87 homolog NW_004955412 11447935 11455153 + 102008205 AGCD01012795;XM_005378044;XM_005378045;XM_005378046;XM_005378047 XP_005378101;XP_005378102;XP_005378103;XP_005378104 MODEL 8772653 protein-coding Heatr3 HEAT repeat containing 3 INVOLVED IN erythrocyte maturation (ortholog); protein import into nucleus (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955433 8183701 8224117 + 102014597 AGCD01031584;AGCD01031585;AGCD01031586;AGCD01031587;GBBH01036719;XM_005388264 XP_005388321 MODEL 9064864 protein-coding Asb17 ankyrin repeat and SOCS box containing 17 INVOLVED IN protein polyubiquitination (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN apical ectoplasmic specialization (ortholog) NW_004955423 17072213 17089558 + 102024474 AGCD01023845;GBDF01048405;XM_005385225 XP_005385282 MODEL 8855937 protein-coding Snrpa small nuclear ribonucleoprotein polypeptide A ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); RNA binding (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); precatalytic spliceosome (ortholog); spliceosomal complex (ortholog) NW_004955578 579087 590010 - 102006181 AGCD01075489;GBCQ01041725;XM_005414022;XM_005414023 XP_005414079;XP_005414080 MODEL 8841203 protein-coding Gp5 glycoprotein V platelet ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); glycoprotein Ib-IX-V complex (ortholog) NW_004955420 14377800 14382003 + 102029972 AGCD01020943;GBDF01054698;XM_005383194 XP_005383251 MODEL 9048342 protein-coding LOC102003076 EKC/KEOPS complex subunit LAGE3-like NW_004955585 16414 18078 + 102003076 AGCD01075989;AGCD01075990;GBDF01011008;XM_005414424;XM_005414425 XP_005414481;XP_005414482 MODEL 8944561 protein-coding Bicc1 BicC family RNA binding protein 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); heart development (ortholog); kidney development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog) NW_004955425 12237611 12522321 + 102010385 AGCD01025504;AGCD01025505;AGCD01025506;AGCD01025507;AGCD01025508;AGCD01025509;AGCD01025510;AGCD01025511;GBCE01077752;XM_005385916;XM_013514878 XP_005385973;XP_013370332 MODEL 8914672 protein-coding LOC102007716 zinc finger protein 416 NW_004955584 345732 357089 - 102007716 AGCD01075940;GBDF01260674;XM_013509856;XR_001232513;XR_001232514 XP_013365310 MODEL 8960367 protein-coding LOC102004867 DCN1-like protein 1 NW_004955447 9722702 9793618 + 102004867 AGCD01040866;XM_013518479 XP_013373933 MODEL 10080250 ncrna LOC106149254 uncharacterized LOC106149254 NW_004955441 10451660 10463453 - 106149254 AGCD01037087;GBDI01342664;XR_001235303 MODEL 8809146 protein-coding Ip6k3 inositol hexakisphosphate kinase 3 ENCODES a protein that exhibits inositol hexakisphosphate 6-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN inositol phosphate biosynthetic process (ortholog); locomotion (ortholog); phosphatidylinositol metabolic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955437 2128337 2150714 - 102011041 AGCD01034260;GBCB01021741;XM_005389508;XM_013516932 XP_005389565;XP_013372386 MODEL 8940184 ncrna LOC102010796 uncharacterized LOC102010796 NW_004955473 4935115 4942810 - 102010796 AGCD01053962;GBDK01418846;XR_001237109;XR_263580 MODEL 8851310 ncrna LOC102003439 uncharacterized LOC102003439 NW_004955415 12033874 12040445 - 102003439 AGCD01016183;GBDF01015290;XR_001233199 MODEL 39131692 rrna 5S_rRNA 5S ribosomal RNA 9056274 pseudo LOC102007368 proline-rich nuclear receptor coactivator 1 pseudogene NW_004955437 795083 811162 - 102007368 AGCD01034163;AGCD01034164;AGCD01034165;AGCD01034166 MODEL 9002652 pseudo LOC102024469 E3 ubiquitin-protein ligase RLIM pseudogene NW_004955420 13292515 13293631 + 102024469 AGCD01020919 MODEL 8753086 protein-coding Fibcd1 fibrinogen C domain containing 1 ENCODES a protein that exhibits chitin binding (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955513 810927 835106 - 102018210 AGCD01066832;XM_005408350;XM_013506563 XP_005408407;XP_013362017 MODEL 9037669 protein-coding LOC102012347 uncharacterized LOC102012347 NW_004955508 3322424 3325128 + 102012347 AGCD01065806;GBCQ01193228;XM_005407736 XP_005407793 MODEL 8704832 protein-coding Bace1 beta-secretase 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); amyloid-beta metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955412 18596643 18620089 - 102026730 AGCD01012945;GBDJ01018816;XM_005378205 XP_005378262 MODEL 8769406 protein-coding Hmgxb3 HMG-box containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955415 4462653 4509622 - 102025999 AGCD01015970;AGCD01015971;GBBH01076485;GBDI01258186;XM_013512212;XM_013512213;XM_013512214 XP_013367666;XP_013367667;XP_013367668 MODEL 8830438 trna trnR(tcg) tRNA-Arg MT 9812 9879 + 15822210 9004574 pseudo LOC102009990 retinol dehydrogenase 11 pseudogene NW_004955438 7901724 7902409 - 102009990 AGCD01035148 MODEL 9018754 protein-coding Sertad3 SERTA domain containing 3 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleus (ortholog) NW_004955578 837686 841561 + 102012380 AGCD01075499;GBDF01122108;XM_005414045 XP_005414102 MODEL 39134480 misc_rna 7SK 7SK RNA 626189212 mirna MIRLET7C microRNA let-7c 8946206 protein-coding Muc1 mucin 1, cell surface associated ENCODES a protein that exhibits p53 binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); allergic conjunctivitis (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); chromatin (ortholog) NW_004955545 1657728 1662112 - 102029448 AGCD01071864;AGCD01071865;GBCQ01007676;XM_013508307;XM_013508308 XP_013363761;XP_013363762 MODEL 8914286 protein-coding Ddx17 DEAD-box helicase 17 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); chromatin DNA binding (ortholog); lncRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); androgen receptor signaling pathway (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 73 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955413 24646317 24664614 - 102019792 AGCD01014373;GBDF01049351;XM_005379258;XM_005379259 XP_005379315;XP_005379316 MODEL 8773419 pseudo LOC102006241 40S ribosomal protein S27-like pseudogene NW_004955475 4541672 4542105 + 102006241 AGCD01054882 MODEL 8755299 protein-coding Gli1 GLI family zinc finger 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); dorsal/ventral pattern formation (ortholog); epidermal cell differentiation (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) NW_004955458 5181761 5193500 + 102028271 AGCD01047467;GBDF01103894;XM_005397375;XM_013520876;XM_013520877;XM_013520878 XP_005397432;XP_013376330;XP_013376331;XP_013376332 MODEL 10313168 protein-coding LOC106150045 putative HTLV-1-related endogenous sequence NW_004955462 9705194 9706002 - 106150045 AGCD01049341;GBDI01338053;XM_013521424 XP_013376878 MODEL 8793141 protein-coding N4bp2l2 NEDD4 binding protein 2 like 2 ENCODES a protein that exhibits enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN blastocyst development (ortholog); in utero embryonic development (ortholog); negative regulation of hematopoietic stem cell differentiation (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog); transcription repressor complex (ortholog) NW_004955431 13314075 13418090 + 102010510 AGCD01030300;AGCD01030301;AGCD01030302;AGCD01030303;AGCD01030304;AGCD01030305;AGCD01030306;AGCD01030307;GBDF01225975;XM_005387711;XM_013515878 XP_005387768;XP_013371332 MODEL 8772977 protein-coding Gabra1 gamma-aminobutyric acid type A receptor subunit alpha1 ENCODES a protein that exhibits diazepam binding (ortholog); GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH alcohol withdrawal syndrome (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); anxiety disorder (ortholog); FOUND IN dendritic spine (ortholog); GABA receptor complex (ortholog); GABA-A receptor complex (ortholog) NW_004955408 15608984 15662309 + 102003211 AGCD01008426;GBDF01144085;XM_005376276 XP_005376333 MODEL 8821940 ncrna LOC102013484 uncharacterized LOC102013484 NW_004955411 20773140 20790799 + 102013484 AGCD01012062;GBDF01156022;XR_001232796;XR_001232797;XR_259940 MODEL 8722933 ncrna LOC102021390 uncharacterized LOC102021390 NW_004955539 3561889 3568046 + 102021390 AGCD01071257;GBDI01058745;XR_264814 MODEL 8959157 pseudo LOC102005203 tetraspanin-3 pseudogene NW_004955402 42278428 42282472 + 102005203 AGCD01001038 MODEL 9064875 protein-coding Cse1l chromosome segregation 1 like PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955445 9012953 9053852 - 102027691 AGCD01039621;AGCD01039622;GBDF01083764;XM_013518240 XP_013373694 MODEL 9028743 ncrna LOC102007371 uncharacterized LOC102007371 NW_004955546 1333455 1336205 - 102007371 AGCD01072048;GBBH01028831;XR_264889 MODEL 8899852 protein-coding LOC102005899 uncharacterized LOC102005899 NW_004955408 4190159 4193209 - 102005899 AGCD01008091;GBDI01371406;XM_005376117 XP_005376174 MODEL 39134170 misc_rna 7SK 7SK RNA 8855409 protein-coding Wdpcp WD repeat containing planar cell polarity effector ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN auditory receptor cell morphogenesis (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 15 (ortholog); FOUND IN axonemal basal plate (ortholog) NW_004955424 20723592 21114801 + 102012774 AGCD01024871;AGCD01024872;AGCD01024873;AGCD01024874;AGCD01024875;AGCD01024876;AGCD01024877;AGCD01024878;AGCD01024879;AGCD01024880;AGCD01024881;AGCD01024882;AGCD01024883;AGCD01024884;AGCD01024885;AGCD01024886;AGCD01024887;AGCD01024888;AGCD01024889;AGCD01024890;AGCD01024891;AGCD01024892;AGCD01024893;GBDF01160193;XM_005385716;XM_005385718;XM_005385719;XM_005385720;XM_013514679;XM_013514680;XM_013514681;XM_013514682;XM_013514683;XM_013514684;XM_013514685;XM_013514686 XP_005385773;XP_005385775;XP_005385776;XP_005385777;XP_013370133;XP_013370134;XP_013370135;XP_013370136;XP_013370137;XP_013370138;XP_013370139;XP_013370140 MODEL 10185737 ncrna LOC106147102 uncharacterized LOC106147102 NW_004955518 1834469 1841480 + 106147102 AGCD01067766;XR_001231854;XR_001231855 MODEL 8824995 protein-coding Plcd3 phospholipase C delta 3 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN angiogenesis (ortholog); labyrinthine layer blood vessel development (ortholog); regulation of cell population proliferation (ortholog); PARTICIPATES IN inositol metabolic pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955451 17822345 17827848 - 102023864 AGCD01043774;GBBH01230083;GBCE01115432;XM_005394564 XP_005394621 MODEL 9012847 pseudo LOC102022730 60S acidic ribosomal protein P1-like NW_004955432 1232045 1232422 + 102022730 AGCD01030588 MODEL 9035318 ncrna LOC102011962 uncharacterized LOC102011962 NW_004955410 25402864 25406681 - 102011962 AGCD01011152;GBDF01041224;XR_259864 MODEL 39131313 protein-coding CYFIP1 cytoplasmic FMR1 interacting protein 1 9048933 protein-coding Pstpip2 proline-serine-threonine phosphatase interacting protein 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955402 31538335 31637901 - 102027028 AGCD01000790;AGCD01000791;AGCD01000792;AGCD01000793;AGCD01000794;AGCD01000795;AGCD01000796;AGCD01000797;AGCD01000798;AGCD01000799;AGCD01000800;GBDJ01042045;XM_005372863;XM_013510408 XP_005372920;XP_013365862 MODEL 8810882 protein-coding Fam227a family with sequence similarity 227 member A ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 24732478 24780909 - 102020996 AGCD01014378;AGCD01014379;GBDF01187832;XM_005379262;XM_013511491 XP_005379319;XP_013366945 MODEL 8880742 protein-coding Sertad4 SERTA domain containing 4 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955489 1947819 1958434 - 102019070 AGCD01059855;AGCD01059856;GBBH01121747;GBDJ01175985;XM_005404520 XP_005404577 MODEL 39132507 snrna U6 U6 spliceosomal RNA 8707990 ncrna LOC102018022 uncharacterized LOC102018022 NW_004955533 900860 904030 - 102018022 AGCD01070334;GBDF01261009;XR_264740 MODEL 8751975 ncrna LOC102025146 uncharacterized LOC102025146 NW_004955429 15336841 15349273 - 102025146 AGCD01028803;AGCD01028804;GBDF01017223;XR_261338 MODEL 8807012 ncrna LOC102024470 uncharacterized LOC102024470 NW_004955421 22223831 22235690 + 102024470 AGCD01022128;GBCB01111021;XR_260814 MODEL 9023046 pseudo LOC102023096 zinc finger CCCH domain-containing protein 15 pseudogene NW_004955402 18254821 18256134 - 102023096 AGCD01000528 MODEL 8838597 protein-coding Ipcef1 interaction protein for cytohesin exchange factors 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); cervical cancer (ortholog); lymphoid leukemia (ortholog) NW_004955439 7666246 7836481 + 102023296 AGCD01035772;AGCD01035773;AGCD01035774;AGCD01035775;AGCD01035776;GBDI01386749;XM_005390558;XM_005390559;XM_005390561;XM_013517366;XM_013517367;XM_013517368;XM_013517369;XM_013517370;XM_013517371 XP_005390615;XP_005390616;XP_005390618;XP_013372820;XP_013372821;XP_013372822;XP_013372823;XP_013372824;XP_013372825 MODEL 8885081 protein-coding LOC102023450 acid ceramidase-like NW_004955411 35205669 35207222 + 102023450 AGCD01012421;GBDF01118993;XM_005377888 XP_005377945 MODEL 8744929 protein-coding Fibin fin bud initiation factor homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955476 6325492 6327075 + 102014775 AGCD01055328;GBDK01432398;XM_005401745 XP_005401802 MODEL 8806576 protein-coding LOC102012348 ankyrin repeat domain-containing protein 26-like NW_004955429 6598602 6603032 - 102012348 AGCD01028554;XM_013515351 XP_013370805 MODEL 9000862 protein-coding Snrpa1 small nuclear ribonucleoprotein polypeptide A' INVOLVED IN mRNA splicing, via spliceosome (ortholog); spermatogenesis (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); connective tissue disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear body (ortholog); nuclear speck (ortholog) NW_004955416 28166885 28178404 - 102010799 AGCD01017626;GBDJ01141602;XM_005381647 XP_005381704 MODEL 8881058 protein-coding LOC102003080 interleukin-1 receptor type 1-like NW_004955756 6773 24480 + 102003080 AGCD01078281;GBCB01092471;GBDK01182668;XM_005415091 XP_005415148 MODEL 8782671 protein-coding Hmgxb4 HMG-box containing 4 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN NURF complex (ortholog) NW_004955405 43058768 43088592 + 102005886 AGCD01005598;AGCD01005599;GBDF01225224;XM_005374654;XM_005374655;XM_005374656;XM_005374657;XM_005374659;XM_005374660;XM_013519213;XR_259462 XP_005374711;XP_005374712;XP_005374713;XP_005374714;XP_005374716;XP_005374717;XP_013374667 MODEL 8764911 protein-coding LOC102007719 RNA polymerase II elongation factor ELL2-like NW_004955595 658812 660714 - 102007719 AGCD01076475;GBDF01287937;XM_005414679 XP_005414736 MODEL 9015446 protein-coding Bicd1 BICD cargo adaptor 1 ENCODES a protein that exhibits cytoskeletal adaptor activity (ortholog); dynactin binding (ortholog); dynein complex binding (ortholog); INVOLVED IN microtubule anchoring at microtubule organizing center (ortholog); minus-end-directed organelle transport along microtubule (ortholog); negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic microtubule (ortholog); cytoplasmic vesicle (ortholog) NW_004955505 3330933 3544752 - 102027765 AGCD01065020;AGCD01065021;AGCD01065022;AGCD01065023;AGCD01065024;AGCD01065025;AGCD01065026;AGCD01065027;AGCD01065028;AGCD01065029;AGCD01065030;GBBH01167340;GBDJ01318423;XM_005407175 XP_005407232 MODEL 8956175 protein-coding Muc13 mucin 13, cell surface associated ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN maintenance of gastrointestinal epithelium (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955427 23979080 24001627 - 102025929 AGCD01027496;XM_013515057 XP_013370511 MODEL 8972837 protein-coding Ndst3 N-deacetylase and N-sulfotransferase 3 ENCODES a protein that exhibits deacetylase activity (ortholog); heparan sulfate N-deacetylase activity (ortholog); heparan sulfate N-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955428 21671432 21853492 - 102026659 AGCD01028145;AGCD01028146;AGCD01028147;AGCD01028148;AGCD01028149;AGCD01028150;AGCD01028151;AGCD01028152;AGCD01028153;AGCD01028154;GBDJ01048910;XM_005386806;XM_005386807;XM_013515341;XM_013515342;XM_013515343 XP_005386863;XP_005386864;XP_013370795;XP_013370796;XP_013370797 MODEL 8881253 pseudo LOC102010800 splicing regulatory glutamine/lysine-rich protein 1-like NW_004955479 4446160 4449021 - 102010800 AGCD01056323 MODEL 8855855 pseudo LOC102003440 ankyrin repeat domain-containing protein 27 pseudogene NW_004955474 5254195 5258861 - 102003440 AGCD01054402 MODEL 39131693 rrna 5S_rRNA 5S ribosomal RNA 10097599 protein-coding LOC106149255 protein CEBPZOS NW_004955441 5008528 5013489 + 106149255 AGCD01036867;GBBH01118613;XM_013517534;XM_013517535;XM_013517536;XM_013517537;XM_013517538 XP_013372988;XP_013372989;XP_013372990;XP_013372991;XP_013372992 MODEL 9026891 protein-coding N4bp3 NEDD4 binding protein 3 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); Familial Prostate Cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955408 2113540 2119863 - 102012737 AGCD01007992;GBCQ01095640;XM_005376042;XM_005376043;XM_013508081 XP_005376099;XP_005376100;XP_013363535 MODEL 8853880 protein-coding CUNH11orf91 chromosome unknown C11orf91 homolog NW_004955422 12536515 12539332 + 102021136 AGCD01022796;GBDF01043279;XM_005384157 XP_005384214 MODEL 8888603 protein-coding Nudt19 nudix hydrolase 19 ENCODES a protein that exhibits coenzyme A diphosphatase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN butyryl-CoA catabolic process (ortholog); coenzyme A catabolic process (ortholog); malonyl-CoA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955468 5284650 5291706 - 102030174 AGCD01051962;AGCD01051963;GBCQ01006390;XM_005400086 XP_005400143 MODEL 8987417 protein-coding Asb18 ankyrin repeat and SOCS box containing 18 ASSOCIATED WITH cervical cancer (ortholog); uterine carcinosarcoma (ortholog) NW_004955453 460284 521131 + 102029262 AGCD01044591;AGCD01044592;AGCD01044593;GBCB01024949;GBCB01024951;XM_013519996 XP_013375450 MODEL 8990815 ncrna LOC102009994 uncharacterized LOC102009994 NW_004955551 302834 319846 + 102009994 AGCD01072654;GBDF01089175;XR_264922 MODEL 9067132 ncrna LOC102021391 uncharacterized LOC102021391 NW_004955542 1478570 1495492 + 102021391 AGCD01071504;GBCE01185531;XR_001232169;XR_001232170;XR_264854;XR_264855 MODEL 8833811 protein-coding Gp9 glycoprotein IX platelet INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Bernard-Soulier syndrome (ortholog); Bernard-Soulier Syndrome, Type C (ortholog); genetic disease (ortholog); FOUND IN glycoprotein Ib-IX-V complex (ortholog) NW_004955450 10478165 10479425 - 102012594 AGCD01042622;GBBH01149548;XM_005393739 XP_005393796 MODEL 8917095 protein-coding LOC102025147 mannose-binding protein A-like NW_004955510 239781 243643 - 102025147 AGCD01066142;GBDF01235188;XM_005407864;XM_005407865;XM_013506332 XP_005407921;XP_005407922;XP_013361786 MODEL 39134481 misc_rna 7SK 7SK RNA 8816637 protein-coding Kiaa1755 KIAA1755 ortholog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); prostate cancer (ortholog) NW_004955445 18461126 18497134 + 102013664 AGCD01039905;GBDF01073855;XM_005392540;XM_005392541 XP_005392597;XP_005392598 MODEL 9017489 protein-coding LOC102004870 BMP-binding endothelial regulator protein NW_004955582 926239 1169313 + 102004870 AGCD01075777;AGCD01075778;AGCD01075779;AGCD01075780;AGCD01075781;AGCD01075782;AGCD01075783;AGCD01075784;AGCD01075785;GBCE01159927;GBCE01159930;XM_005414284 XP_005414341 MODEL 10285545 ncrna LOC106147103 uncharacterized LOC106147103 NW_004955519 2068838 2070831 + 106147103 AGCD01067914;GBDK01163267;XR_001231856 MODEL 626189141 mirna MIRLET7D microRNA let-7d 8710505 pseudo LOC102008855 S-formylglutathione hydrolase pseudogene NW_004955483 8647789 8648240 - 102008855 AGCD01057841 MODEL 8707577 protein-coding Ddx18 DEAD-box helicase 18 INVOLVED IN cellular response to estradiol stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955459 11799435 11810973 - 102027723 AGCD01048237;GBCB01076894;XM_005397693 XP_005397750 MODEL 8946980 ncrna LOC102011963 uncharacterized LOC102011963 NW_004955410 30060160 30071952 - 102011963 AGCD01011301;GBDF01192837;XR_259886 MODEL 8744770 protein-coding Plcd4 phospholipase C delta 4 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phospholipase C activity (ortholog); INVOLVED IN acrosome reaction (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955453 14775119 14812872 - 102006870 AGCD01044873;AGCD01044874;GBDK01398186;XM_013519913;XM_013519914;XM_013519915;XM_013519916;XM_013519917;XM_013519918;XM_013519920;XM_013519921;XM_013519922;XM_013519923;XM_013519924;XM_013519925 XP_013375367;XP_013375368;XP_013375369;XP_013375370;XP_013375371;XP_013375372;XP_013375374;XP_013375375;XP_013375376;XP_013375377;XP_013375378;XP_013375379 MODEL 8944602 protein-coding Ptafr platelet activating factor receptor ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine (ortholog); cellular response to cAMP (ortholog); cellular response to fatty acid (ortholog); ASSOCIATED WITH Otitis Media with Effusion; Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 7309854 7345579 - 102012825 AGCD01044144;AGCD01044145;GBCE01013423;XM_005394941;XM_013519732;XM_013519733 XP_005394998;XP_013375186;XP_013375187 MODEL 9046786 protein-coding Gli2 GLI family zinc finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); axon guidance (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Animal Disease Models (ortholog); Anorectal Malformations (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955459 8892917 9124672 - 102015812 AGCD01048146;AGCD01048147;AGCD01048148;AGCD01048149;AGCD01048150;AGCD01048151;GBBH01168983;GBDJ01388667;XM_013521092 XP_013376546 MODEL 8937609 protein-coding Cyfip2 cytoplasmic FMR1 interacting protein 2 INVOLVED IN apoptotic process (ortholog); cell-cell adhesion (ortholog); dendrite extension (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 11483891 11586628 + 102014747 AGCD01008311;AGCD01008312;GBBH01150816;XM_013508767;XM_013508777 XP_013364221;XP_013364231 MODEL 39132508 snrna U6 U6 spliceosomal RNA 8754996 pseudo LOC102018025 inositol polyphosphate multikinase pseudogene NW_004955537 2739915 2745001 - 102018025 AGCD01070938 MODEL 8996228 protein-coding Gabra2 gamma-aminobutyric acid type A receptor subunit alpha2 ENCODES a protein that exhibits benzodiazepine receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); inhibitory synapse assembly (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendrite membrane (ortholog) NW_004955443 2042202 2176589 + 102030575 AGCD01038154;AGCD01038155;AGCD01038156;AGCD01038157;AGCD01038158;AGCD01038159;GBDI01358529;XM_005391900;XM_005391901;XM_005391902;XM_005391903;XM_005391904;XM_005391905 XP_005391957;XP_005391958;XP_005391959;XP_005391960;XP_005391961;XP_005391962 MODEL 8848006 protein-coding LOC102005204 PRAME family member 12-like NW_004955608 68987 90514 - 102005204 AGCD01077000;XM_013510117 XP_013365571 MODEL 8952084 pseudo LOC102007372 60S ribosomal protein L26-like NW_004955441 13050841 13051739 - 102007372 AGCD01037141 MODEL 8890510 protein-coding Csf1 colony stimulating factor 1 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to parathyroid hormone stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); amyloidosis (ortholog); FOUND IN CSF1-CSF1R complex (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955435 13404236 13423059 + 102012469 AGCD01033200;GBCE01168984;XM_005388902;XM_005388903;XM_013516530 XP_005388959;XP_005388960;XP_013371984 MODEL 8712499 ncrna LOC102005902 uncharacterized LOC102005902 NW_004955409 9536684 9555161 + 102005902 AGCD01009443;AGCD01009444;GBDF01156061;XR_259761 MODEL 39132312 rrna 5S_rRNA 5S ribosomal RNA 8794718 protein-coding Wdr1 WD repeat domain 1 ENCODES a protein that exhibits actin filament binding (ortholog); actin severing activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); apical junction assembly (ortholog); cortical cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); autosomal dominant intellectual developmental disorder 61 (ortholog); FOUND IN actin cytoskeleton (ortholog); anchoring junction (ortholog); cell junction (ortholog) NW_004955549 2640193 2674818 + 102012586 AGCD01072480;GBCQ01034784;GBDJ01009712;XM_013508539 XP_013363993 MODEL 8896711 pseudo LOC102021392 ADP-ribosylation factor-like protein 6-interacting protein 6 pseudogene NW_004955543 1498723 1499331 - 102021392 AGCD01071623 MODEL 8725005 protein-coding LOC102025149 olfactory receptor 1013-like NW_004955511 1785957 1786877 + 102025149 AGCD01066380;XM_005408244 XP_005408301 MODEL 8967496 ncrna LOC102012357 uncharacterized LOC102012357 NW_004955436 8984095 9017211 + 102012357 AGCD01033755;GBDF01158995;XR_261779;XR_261780 MODEL 10332784 ncrna LOC106150046 uncharacterized LOC106150046 NW_004955462 9544598 9550462 + 106150046 AGCD01049339;GBDI01311494;XR_001236607 MODEL 8941975 protein-coding Heatr4 HEAT repeat containing 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog) NW_004955523 1868954 1928154 + 102026787 AGCD01068549;AGCD01068550;GBDF01155719;XM_005409419;XM_005409420;XM_005409421;XM_005409422;XM_005409423;XM_013507124 XP_005409476;XP_005409477;XP_005409478;XP_005409479;XP_005409480;XP_013362578 MODEL 8835485 protein-coding Muc15 mucin 15, cell surface associated NW_004955476 5988557 6000191 - 102013287 AGCD01055321;GBBH01163712;XM_005401741 XP_005401798 MODEL 9000631 trna trnS1(gct) tRNA-Ser MT 11621 11681 + 15822231 8707940 protein-coding LOC102013488 disintegrin and metalloproteinase domain-containing protein 29-like NW_004955466 20379 80896 + 102013488 AGCD01050641;AGCD01050642;AGCD01050643;AGCD01050644;AGCD01050645;AGCD01050646;AGCD01050647;AGCD01050648;AGCD01050649;XM_005399240 XP_005399297 MODEL 8971667 ncrna LOC102010804 uncharacterized LOC102010804 NW_004955417 3968290 4005083 + 102010804 AGCD01017933;AGCD01017934;GBCB01092654;XR_001233425;XR_001233426;XR_001233427;XR_001233428;XR_001233429 MODEL 8741352 pseudo LOC102003443 mitochondrial fission factor pseudogene NW_004955416 13475518 13476401 - 102003443 AGCD01017224;XM_005381465 MODEL 9014092 pseudo LOC102024471 10 kDa heat shock protein, mitochondrial-like NW_004955421 4215206 4215943 + 102024471 AGCD01021685 MODEL 8900505 protein-coding Sertm1 serine rich and transmembrane domain containing 1 ASSOCIATED WITH sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955431 9363917 9384620 - 102027666 AGCD01030177;GBBH01024568;XM_005387677;XM_005387678;XM_005387679 XP_005387734;XP_005387735;XP_005387736 MODEL 9063378 protein-coding Bace2 beta-secretase 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN astrocyte activation (ortholog); glucose homeostasis (ortholog); melanosome organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dense core granule (ortholog); Golgi apparatus (ortholog); melanosome (ortholog) NW_004955407 40792089 40879872 + 102022467 AGCD01007850;AGCD01007851;AGCD01007852;GBBH01042998;GBCE01054363;XM_013505275 XP_013360729 MODEL 39134171 misc_rna 7SK 7SK RNA 8758594 ncrna LOC102023451 uncharacterized LOC102023451 NW_004955465 5552993 5555587 + 102023451 AGCD01050431;GBDF01260515;XR_263236 MODEL 8996816 protein-coding Fibp FGF1 intracellular binding protein ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN platelet aggregation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN membrane (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955422 19435528 19440095 + 102025589 AGCD01023006;GBDF01048191;XM_005384449;XM_005384450;XM_005384451 XP_005384506;XP_005384507;XP_005384508 MODEL 8766207 ncrna LOC102007380 uncharacterized LOC102007380 NW_004955445 17614758 17619898 - 102007380 AGCD01039895;GBDF01145045;XR_262349 MODEL 10281399 protein-coding CUNH11orf97 chromosome unknown C11orf97 homolog INVOLVED IN cilium assembly (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog) NW_004955605 411307 421934 - 106147638 AGCD01076946;GBBH01166937;XM_013510106 XP_013365560 MODEL 9052001 protein-coding LOC102009995 CMRF35-like molecule 6 NW_004955553 1453306 1458327 + 102009995 AGCD01072882;GBDK01277584;XM_005412239 XP_005412296 MODEL 9039477 ncrna LOC102007724 uncharacterized LOC102007724 NW_004955403 45845767 45849351 - 102007724 AGCD01002838;GBDF01008253;XR_259240 MODEL 8808246 protein-coding Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ENCODES a protein that exhibits histone pre-mRNA DCP binding (ortholog); RNA binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); protein methylation (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrocostomandibular syndrome (ortholog); Disease Progression (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955415 13522638 13530725 - 102015006 AGCD01016252;GBDI01021505;XM_005380752;XM_005380753;XM_005380754;XM_005380755 XP_005380809;XP_005380810;XP_005380811;XP_005380812 MODEL 39132316 rrna 5S_rRNA 5S ribosomal RNA 39131694 rrna 5S_rRNA 5S ribosomal RNA 8937460 protein-coding Fam227b family with sequence similarity 227 member B ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955409 4568562 4769010 + 102008294 AGCD01009292;AGCD01009293;AGCD01009294;AGCD01009295;AGCD01009296;GBDF01081662;XM_005376688;XM_005376689;XM_013510294 XP_005376745;XP_005376746;XP_013365748 MODEL 8943440 protein-coding LOC102023098 vomeronasal type-1 receptor 2-like NW_004955604 464901 465824 + 102023098 AGCD01076908;XM_005414885 XP_005414942 MODEL 8717136 protein-coding LOC102006243 calsyntenin-1 NW_004955479 9732376 9734653 + 102006243 AGCD01056494;GBCE01076233;GBDI01068209;XM_013503286 XP_013358740 MODEL 8765419 protein-coding Ptar1 protein prenyltransferase alpha subunit repeat containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955434 3309819 3356746 + 102003056 AGCD01032132;GBCQ01141133;XM_005388558 XP_005388615 MODEL 8838452 protein-coding Ipmk inositol polyphosphate multikinase ENCODES a protein that exhibits 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); flavonoid binding (ortholog); inositol-1,3,4,5-tetrakisphosphate 6-kinase activity (ortholog); INVOLVED IN inositol phosphate biosynthetic process (ortholog); inositol trisphosphate metabolic process (ortholog); necroptotic process (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955425 11949849 12000610 - 102018847 AGCD01025496;GBDK01187137;XM_013514870;XM_013514871 XP_013370324;XP_013370325 MODEL 39132509 snrna U6 U6 spliceosomal RNA 9065411 protein-coding Gpa33 glycoprotein A33 ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Latent Tuberculosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955462 9840188 9869938 + 102026614 AGCD01049344;AGCD01049345;GBDI01324632;XM_005398235 XP_005398292 MODEL 8710348 protein-coding Plce1 phospholipase C epsilon 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); enzyme binding (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); epidermal growth factor receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); benign familial hematuria (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); plasma membrane (ortholog) NW_004955507 555570 825568 + 102004404 AGCD01065477;AGCD01065478;AGCD01065479;AGCD01065480;AGCD01065481;AGCD01065482;AGCD01065483;AGCD01065484;AGCD01065485;AGCD01065486;AGCD01065487;AGCD01065488;GBDK01321403;XM_005407528;XM_013506159;XM_013506160 XP_005407585;XP_013361613;XP_013361614 MODEL 8922815 protein-coding Gabra3 gamma-aminobutyric acid type A receptor subunit alpha3 ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN auditory behavior (ortholog); chemical synaptic transmission (ortholog); response to lead ion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Binge Drinking (ortholog); bipolar disorder (ortholog); FOUND IN GABA-A receptor complex (ortholog); GABA-ergic synapse (ortholog); postsynaptic specialization membrane (ortholog) NW_004955498 7672982 7904783 - 102010068 AGCD01063154;AGCD01063155;AGCD01063156;AGCD01063157;AGCD01063158;AGCD01063159;AGCD01063160;AGCD01063161;GBBH01190623;XM_005406447;XM_005406448;XM_005406449;XM_005406450;XM_005406451 XP_005406504;XP_005406505;XP_005406506;XP_005406507;XP_005406508 MODEL 8996328 protein-coding Hmmr hyaluronan mediated motility receptor ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN hyaluronan catabolic process (ortholog); receptor-mediated endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955408 16865066 16895918 + 102004899 AGCD01008448;GBDF01157808;XM_005376280 XP_005376337 MODEL 8833442 protein-coding Bach1 BTB domain and CNC homolog 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN DNA repair (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiotoxicity (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955407 28678181 28701115 + 102027488 AGCD01007593;AGCD01007594;GBDF01225784;XM_013504068 XP_013359522 MODEL 8926938 protein-coding Csf1r colony stimulating factor 1 receptor ENCODES a protein that exhibits cytokine binding (ortholog); macrophage colony-stimulating factor receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cardiac muscle cell proliferation (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute kidney failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); CSF1-CSF1R complex (ortholog) NW_004955415 4434486 4462505 + 102019056 AGCD01015970;GBCE01001881;XM_005380587 XP_005380644 MODEL 39134172 misc_rna 7SK 7SK RNA 8866073 protein-coding Bicd2 BICD cargo adaptor 2 ENCODES a protein that exhibits dynactin binding (ortholog); dynein complex binding (ortholog); dynein light intermediate chain binding (ortholog); INVOLVED IN centrosome localization (ortholog); microtubule anchoring at microtubule organizing center (ortholog); microtubule-based movement (ortholog); ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); amyotrophic lateral sclerosis (ortholog); anxiety disorder (ortholog); FOUND IN annulate lamellae (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955515 5060176 5105298 + 102025831 AGCD01067337;AGCD01067338;GBCE01133926;XM_005408901;XM_005408902 XP_005408958;XP_005408959 MODEL 10117645 ncrna LOC106147104 uncharacterized LOC106147104 NW_004955408 30140623 30150670 - 106147104 AGCD01008799;GBDF01155921;XR_001231858 MODEL 626189142 mirna MIRLET7F1 microRNA let-7f-1 10086805 ncrna LOC106149256 uncharacterized LOC106149256 NW_004955405 10219394 10222979 + 106149256 AGCD01004808;GBDF01242237;XR_001235305 MODEL 8708903 protein-coding Ndst4 N-deacetylase and N-sulfotransferase 4 ENCODES a protein that exhibits deacetylase activity (ortholog); heparan sulfate N-sulfotransferase activity (ortholog); N-acetylglucosamine deacetylase activity (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Prostatic Neoplasms (ortholog) NW_004955428 24376587 24636555 + 102028318 AGCD01028255;AGCD01028256;AGCD01028257;AGCD01028258;AGCD01028259;AGCD01028260;AGCD01028261;AGCD01028262;AGCD01028263;AGCD01028264;AGCD01028265;GBDF01226340;XM_013515257;XM_013515258;XM_013515259;XM_013515260;XM_013515261 XP_013370711;XP_013370712;XP_013370713;XP_013370714;XP_013370715 MODEL 8751758 pseudo LOC102012361 iron-sulfur cluster assembly 1 homolog, mitochondrial pseudogene NW_004955437 12049308 12050497 - 102012361 AGCD01034594 MODEL 8878298 protein-coding Cygb cytoglobin ENCODES a protein that exhibits carbon monoxide binding (ortholog); catalase activity (ortholog); fatty acid peroxidase activity (ortholog); INVOLVED IN fatty acid oxidation (ortholog); negative regulation of collagen biosynthetic process (ortholog); negative regulation of fibroblast migration (ortholog); ASSOCIATED WITH chronic pancreatitis (ortholog); Experimental Liver Cirrhosis (ortholog); extrahepatic cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuron projection (ortholog) NW_004955506 5766006 5775722 + 102023381 AGCD01065387;GBBH01228785;XM_005407427;XM_013506123;XM_013506124 XP_005407484;XP_013361577;XP_013361578 MODEL 8823434 ncrna LOC102018027 uncharacterized LOC102018027 NW_004955437 7912514 7931491 - 102018027 AGCD01034474;AGCD01034475;GBDI01369509;XR_001235114;XR_001235115;XR_001235116 MODEL 8835506 protein-coding LOC102013491 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10981913 11033217 - 102013491 AGCD01051593;AGCD01051594;AGCD01051595;AGCD01051596;AGCD01051597;GBDK01014412;XM_013522161;XM_013522162;XM_013522163;XM_013522164 XP_013377615;XP_013377616;XP_013377617;XP_013377618 MODEL 8909233 protein-coding LOC102024472 GTPase IMAP family member 7-like NW_004955491 5229068 5233840 - 102024472 AGCD01060475;AGCD01060476;XM_005404791 XP_005404848 MODEL 39134482 misc_rna 7SK 7SK RNA 8747419 protein-coding LOC102003083 zinc finger and SCAN domain-containing protein 4-like NW_004956963 711 1829 + 102003083 AGCD01080359;XM_013510241 XP_013365695 MODEL 9035854 protein-coding Kiaa1958 KIAA1958 ortholog ASSOCIATED WITH COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); stomach cancer (ortholog) NW_004955419 14756207 14822763 - 102003657 AGCD01020044;GBDF01039862;XM_005382702;XM_005382704;XM_013513274 XP_005382759;XP_005382761;XP_013368728 MODEL 8925147 pseudo LOC102021393 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like NW_004955439 7425526 7524935 - 102021393 AGCD01035768;AGCD01035769;AGCD01035770;AGCD01035771;AGCD01035772 MODEL 8934202 protein-coding Wdr11 WD repeat domain 11 INVOLVED IN cilium assembly (ortholog); head development (ortholog); heart development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Autosomal Recessive Intellectual Developmental Disorder 78 (ortholog); CHARGE syndrome (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955551 1733079 1788354 + 102015571 AGCD01072698;AGCD01072699;GBDF01220834;XM_005412176 XP_005412233 MODEL 8857221 protein-coding LOC102025154 zinc finger protein 85-like NW_004955432 4681460 4704789 - 102025154 AGCD01030733;AGCD01030734;AGCD01030735;AGCD01030736;AGCD01030737;GBBH01213954;GBCQ01068809;XM_013515932 XP_013371386 MODEL 9063648 ncrna LOC102008856 uncharacterized LOC102008856 NW_004955484 4129624 4136398 + 102008856 AGCD01058202;GBDF01220583;XR_001231058;XR_001231059;XR_001231060;XR_001231061;XR_263884 MODEL 8724761 pseudo LOC102011964 40S ribosomal protein S3a pseudogene NW_004955410 19855730 19856950 - 102011964 AGCD01011031 MODEL 8747290 protein-coding Csf2 colony stimulating factor 2 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); agranulocytosis (ortholog); FOUND IN extracellular region (ortholog); granulocyte macrophage colony-stimulating factor receptor complex (ortholog) NW_004955408 3452009 3454255 + 102026504 AGCD01008056;GBDK01361855;XM_005376094 XP_005376151 MODEL 39132321 rrna 5S_rRNA 5S ribosomal RNA 9051193 protein-coding Muc16 mucin 16, cell surface associated INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); negative regulation of interleukin-6 production (ortholog); negative regulation of wound healing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bile Duct Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955563 432160 581330 + 102011705 AGCD01074068;AGCD01074069;AGCD01074070;GBBH01126020;GBDI01007967;XM_013509166;XM_013509167 XP_013364620;XP_013364621 MODEL 39131695 rrna 5S_rRNA 5S ribosomal RNA 8950751 protein-coding Heatr5a HEAT repeat containing 5A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955409 29208050 29312752 + 102011510 AGCD01010256;AGCD01010257;AGCD01010258;AGCD01010259;GBDJ01239001;XM_005376957;XM_005376960;XM_013510379;XM_013510380;XM_013510381;XM_013510382 XP_005377014;XP_005377017;XP_013365833;XP_013365834;XP_013365835;XP_013365836 MODEL 8758567 protein-coding LOC102022737 trace amine-associated receptor 6 NW_004955436 13139545 13140576 + 102022737 AGCD01033854;XM_005389212 XP_005389269 MODEL 9011118 protein-coding Gli3 GLI family zinc finger 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anterior semicircular canal development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); anodontia (ortholog); Anorectal Malformations (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955460 1528457 1805584 + 102014330 AGCD01048376;AGCD01048377;AGCD01048378;AGCD01048379;GBCE01181687;XM_013521254;XM_013521255;XM_013521256 XP_013376708;XP_013376709;XP_013376710 MODEL 39131544 protein-coding FAM229A family with sequence similarity 229 member A 9021137 pseudo LOC102003444 vesicle transport through interaction with t-SNAREs homolog 1B pseudogene NW_004955478 11045244 11049588 + 102003444 AGCD01056157 MODEL 9027635 ncrna LOC102005205 uncharacterized LOC102005205 NW_004955403 8964592 8970691 - 102005205 AGCD01001898;GBDF01159891;XR_001234497 MODEL 8992421 protein-coding Asb2 ankyrin repeat and SOCS box containing 2 ENCODES a protein that exhibits cullin family protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); ubiquitin ligase complex (ortholog); Z disc (ortholog) NW_004955438 16005570 16041668 - 102009220 AGCD01035391;AGCD01035392;AGCD01035393;GBCB01005612;XM_005390356;XM_005390357 XP_005390413;XP_005390414 MODEL 8812330 pseudo LOC102023099 olfactory receptor 7A17-like NW_004955626 111700 112600 + 102023099 AGCD01077468 MODEL 8931635 protein-coding Ptbp1 polypyrimidine tract binding protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); regulatory region RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cardiac ventricle development (ortholog); IRES-dependent viral translational initiation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); neuron projection terminus (ortholog); nucleolus (ortholog) NW_004955495 6990565 7002492 - 102019185 AGCD01062109;AGCD01062110;GBBH01001751;XM_005406021;XM_005406023;XM_013505338;XM_013505339 XP_005406078;XP_005406080;XP_013360792;XP_013360793 MODEL 8951158 pseudo LOC102004873 60S ribosomal protein L7-like 1 pseudogene NW_004955402 41521289 41522029 + 102004873 AGCD01001016 MODEL 8803121 protein-coding Gpaa1 glycosylphosphatidylinositol anchor attachment 1 ENCODES a protein that exhibits GPI anchor binding (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); Glycosylphosphatidylinositol Biosynthesis Defect 15 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); GPI-anchor transamidase complex (ortholog) NW_004955454 2735463 2738956 + 102020753 AGCD01045029;GBBH01088884;XM_005395839 XP_005395896 MODEL 8906378 pseudo LOC102009996 cytochrome P450 2B4-like NW_004955555 49910 64514 - 102009996 AGCD01073023 MODEL 9026820 protein-coding LOC102007382 cytochrome P450 3A9-like NW_004955573 1366578 1409840 + 102007382 AGCD01075045;AGCD01075046;AGCD01075047;AGCD01075048;GBDI01323456;XM_005413769;XM_005413770 XP_005413826;XP_005413827 MODEL 9002250 protein-coding LOC102007725 ubiquitin carboxyl-terminal hydrolase 16-like NW_004957393 10 1496 + 102007725 AGCD01080789;GBCC01037265;XM_013510251 XP_013365705 MODEL 10329823 protein-coding Naa10 N-alpha-acetyltransferase 10, NatA catalytic subunit ENCODES a protein that exhibits acetyltransferase activity (ortholog); N-acetyltransferase activity (ortholog); protein N-terminal-serine acetyltransferase activity (ortholog); INVOLVED IN negative regulation of maintenance of mitotic sister chromatid cohesion, centromeric (ortholog); positive regulation of protein refolding (ortholog); protein maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); astigmatism (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) NW_004955580 604805 609978 - 106147548 AGCD01075614;GBBH01060312;XM_013509703;XM_013509704 XP_013365157;XP_013365158 MODEL 9011541 protein-coding Ddx19b DEAD-box helicase 19B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955484 3120480 3137917 + 102029296 AGCD01058155;AGCD01058156;GBDJ01191119;XM_005403472 XP_005403529 MODEL 8978338 protein-coding Bach2 BACH transcriptional regulator 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); primary adaptive immune response involving T cells and B cells (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); celiac disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955411 16607546 16947359 - 102009920 AGCD01011978;AGCD01011979;AGCD01011980;AGCD01011981;AGCD01011982;AGCD01011983;GBDJ01370411;XM_005377762;XM_005377763;XM_005377764;XM_013510775;XM_013510776;XM_013510777 XP_005377819;XP_005377820;XP_005377821;XP_013366229;XP_013366230;XP_013366231 MODEL 10106038 ncrna LOC106150047 uncharacterized LOC106150047 NW_004955462 4091267 4100236 - 106150047 AGCD01049216;GBDK01272450;XR_001236608 MODEL 8766111 trna trnS2(tga) tRNA-Ser MT 6876 6944 - 15822205 9015084 protein-coding Nudt2 nudix hydrolase 2 ENCODES a protein that exhibits bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH astigmatism (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog) NW_004955472 1760046 1774539 - 102005926 AGCD01053411;GBDJ01091801;XM_005401094 XP_005401151 MODEL 10372403 ncrna LOC106149257 uncharacterized LOC106149257 NW_004955441 5462987 5471906 - 106149257 AGCD01036878;GBDJ01360263;XR_001235306;XR_001235307;XR_001235308 MODEL 8811239 ncrna LOC102010807 uncharacterized LOC102010807 NW_004955419 24809478 24811822 + 102010807 AGCD01020356;GBCE01047588;XR_001233558;XR_260656 MODEL 8769238 protein-coding Bicdl1 BICD family like cargo adaptor 1 ENCODES a protein that exhibits dynactin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi to secretory granule transport (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955455 11503828 11606583 - 102020086 AGCD01046008;GBCQ01004436;GBDJ01422826;XM_005396589 XP_005396646 MODEL 8722343 protein-coding Wdr12 WD repeat domain 12 INVOLVED IN maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955457 11947816 11970066 + 102030389 AGCD01046996;AGCD01046997;GBDF01016523;XM_005397046;XM_005397047 XP_005397103;XP_005397104 MODEL 8935168 protein-coding LOC102005904 uncharacterized LOC102005904 NW_004955409 26016614 26049251 + 102005904 AGCD01010148;AGCD01010149;AGCD01010150;GBDF01305671;XM_005376937 XP_005376994 MODEL 8763266 protein-coding Ipo11 importin 11 NW_004955446 6034277 6225627 - 102025188 AGCD01040085;AGCD01040086;AGCD01040087;AGCD01040088;AGCD01040089;AGCD01040090;GBCQ01123362;XM_005392641;XM_013518422 XP_005392698;XP_013373876 MODEL 39134483 misc_rna 7SK 7SK RNA 8813446 protein-coding Hmox1 heme oxygenase 1 ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); D-type glycerophospholipase activity (ortholog); enzyme binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to arsenic-containing substance (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme degradation pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute chest syndrome (ortholog); acute kidney failure (ortholog); FOUND IN caveola (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955405 43124447 43128873 + 102008591 AGCD01005599;GBDI01078698;XM_005374665 XP_005374722 MODEL 9005279 protein-coding Plcg1 phospholipase C gamma 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); glutamate receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); calcium-mediated signaling (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN cell-cell junction (ortholog); clathrin-coated vesicle (ortholog); COP9 signalosome (ortholog) NW_004955445 15787496 15823859 - 102004432 AGCD01039855;AGCD01039856;GBCE01077323;GBDF01085611;XM_005392520 XP_005392577 MODEL 8908863 protein-coding Kiaa2012 KIAA2012 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog) NW_004955457 12558341 12697528 - 102008187 AGCD01047020;AGCD01047021;AGCD01047022;AGCD01047023;AGCD01047024;AGCD01047025;GBBH01151598;XM_005397059;XM_013520727;XM_013520728;XM_013520729 XP_005397116;XP_013376181;XP_013376182;XP_013376183 MODEL 8888737 protein-coding Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ENCODES a protein that exhibits snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); connective tissue disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955415 25880013 25889295 + 102007758 AGCD01016587;GBDF01052661;XM_005380902 XP_005380959 MODEL 8756803 protein-coding LOC102010001 seminal vesicle protein SVP-2-like NW_004955445 12108842 12114494 - 102010001 AGCD01039738;GBDK01186241;XM_005392441 XP_005392498 MODEL 150537128 mirna MIRLET7F2 microRNA let-7f-2 8924221 pseudo LOC102025155 prefoldin subunit 4-like NW_004955516 1138625 1139234 - 102025155 AGCD01067413 MODEL 39131567 protein-coding SERTM2 serine rich and transmembrane domain containing 2 8818666 pseudo LOC102012364 protein angel homolog 2-like NW_004955439 11699313 11700945 - 102012364 AGCD01035919 MODEL 9059575 protein-coding Csf2rb colony stimulating factor 2 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); granulocyte-macrophage colony-stimulating factor signaling pathway (ortholog); interleukin-3-mediated signaling pathway (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-3 signaling pathway; interleukin-5 signaling pathway; ASSOCIATED WITH asthma (ortholog); brain ischemia (ortholog); cholangiocarcinoma (ortholog); FOUND IN granulocyte macrophage colony-stimulating factor receptor complex (ortholog); plasma membrane (ortholog) NW_004955413 23442417 23465093 + 102023345 AGCD01014331;GBDJ01276297;XM_005379171;XM_005379172;XM_005379173;XM_005379174;XM_013511574 XP_005379228;XP_005379229;XP_005379230;XP_005379231;XP_013367028 MODEL 8710866 protein-coding Ddx20 DEAD-box helicase 20 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955435 15209640 15219698 + 102028792 AGCD01033264;GBDF01003762;XM_005388953 XP_005389010 MODEL 8711873 ncrna LOC102006247 uncharacterized LOC102006247 NW_004955418 22849622 22877924 - 102006247 AGCD01019292;GBDF01144012;XR_260583 MODEL 39131696 rrna 5S_rRNA 5S ribosomal RNA 8792615 protein-coding Cylc1 cylicin 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); maintenance of cell number (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal membrane (ortholog); acrosomal vesicle (ortholog) NW_004955529 2996909 3052053 + 102020952 AGCD01069777;AGCD01069778;AGCD01069779;AGCD01069780;AGCD01069781;AGCD01069782;GBDF01089424;XM_005410077;XM_005410078 XP_005410134;XP_005410135 MODEL 8922304 protein-coding LOC102018034 uncharacterized LOC102018034 NW_004955555 1393477 1423035 + 102018034 AGCD01073077;AGCD01073078;AGCD01073079;AGCD01073080;GBDJ01124619;GBDK01349306;XM_013508755;XM_013508756;XM_013508757 XP_013364209;XP_013364210;XP_013364211 MODEL 8954927 protein-coding LOC102024473 chromosome unknown open reading frame, human C11orf96 ASSOCIATED WITH intellectual disability (ortholog) NW_004955422 3639798 3641449 - 102024473 AGCD01022525;AGCD01022526;GBCQ01062880;GBDJ01000004;XM_005384081 XP_005384138 MODEL 8880141 protein-coding Heatr5b HEAT repeat containing 5B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cerebellar Atrophy with Seizures and Variable Developmental Delay (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955441 4791317 4879318 - 102029560 AGCD01036854;AGCD01036855;AGCD01036856;GBDK01321052;XM_005390863;XM_005390864 XP_005390920;XP_005390921 MODEL 8861576 ncrna LOC102013495 uncharacterized LOC102013495 NW_004955468 8052975 8220399 + 102013495 AGCD01052019;AGCD01052020;AGCD01052021;AGCD01052022;AGCD01052023;GBCQ01143499;XR_001236948;XR_263403;XR_263404 MODEL 8828676 pseudo LOC102003085 translationally-controlled tumor protein pseudogene NW_004955404 18220065 18220653 + 102003085 AGCD01003611 MODEL 9021201 protein-coding Fam229b family with sequence similarity 229 member B ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955526 4469766 4484934 - 102010089 AGCD01069367;AGCD01069368;GBDI01296473;XM_005409779;XM_005409780;XM_013507360;XM_013507361;XM_013507362;XM_013507363 XP_005409836;XP_005409837;XP_013362814;XP_013362815;XP_013362816;XP_013362817 MODEL 8916504 protein-coding Gabra4 gamma-aminobutyric acid type A receptor subunit alpha4 ENCODES a protein that exhibits transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN central nervous system development (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN chloride channel complex (ortholog); GABA-A receptor complex (ortholog); GABA-ergic synapse (ortholog) NW_004955443 1564794 1631975 + 102029234 AGCD01038139;GBCE01123188;XM_005391895;XM_013518120 XP_005391952;XP_013373574 MODEL 10227157 protein-coding CUNH11orf98 chromosome unknown C11orf98 homolog INVOLVED IN positive regulation of sister chromatid cohesion (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955599 546973 548685 + 106147623 AGCD01076658;GBDF01088651;XM_013510069 XP_013365523 MODEL 8700742 protein-coding LOC102023101 uncharacterized LOC102023101 NW_004955403 1477883 1487353 + 102023101 AGCD01001723;GBDJ01318496;XM_013514706 XP_013370160 MODEL 39134173 misc_rna 7SK 7SK RNA 10245657 ncrna LOC106147105 uncharacterized LOC106147105 NW_004955519 469647 492700 - 106147105 AGCD01067874;AGCD01067875;GBCB01113377;XR_001231862 MODEL 8990697 protein-coding Ndufa1 NADH:ubiquinone oxidoreductase subunit A1 PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955534 152291 154183 - 102007591 AGCD01070441;GBCC01012764;XM_005410429 XP_005410486 MODEL 8953501 protein-coding LOC102007386 vomeronasal type-1 receptor 1-like NW_004955584 327390 329695 + 102007386 AGCD01075939;GBDK01158023;XM_005414355 XP_005414412 MODEL 10083664 ncrna LOC106150048 uncharacterized LOC106150048 NW_004955462 6088921 6150885 - 106150048 AGCD01049271;AGCD01049272;GBCE01165438;XR_001236610 MODEL 8949221 trna trnT(tgt) tRNA-Thr MT 15303 15370 + 15822215 10102478 ncrna LOC106149258 uncharacterized LOC106149258 NW_004955441 5661258 5705462 - 106149258 AGCD01036882;XR_001235309 MODEL 8837881 protein-coding Muc19 mucin 19, oligomeric ENCODES a protein that exhibits hydroxyapatite binding (ortholog); INVOLVED IN cellular response to interleukin-1; cellular response to tumor necrosis factor; antibacterial innate immune response (ortholog); ASSOCIATED WITH inflammatory bowel disease (ortholog); Sjogren's syndrome (ortholog) NW_004955505 729 64653 - 102028442 AGCD01064946;AGCD01064947;AGCD01064948;GBBH01004632;XM_013505918 XP_013361372 MODEL 8811617 protein-coding LOC102023452 40S ribosomal protein S27-like NW_004955465 9447585 9447842 - 102023452 AGCD01050492;XM_005398988 XP_005399045 MODEL 9038604 protein-coding LOC102022741 flocculation protein FLO11-like NW_004955532 1763410 1767680 - 102022741 AGCD01070200;GBDF01046501;XM_005410235 XP_005410292 MODEL 8872756 protein-coding LOC102005206 PRAME family member 20-like NW_004955615 197175 199688 + 102005206 AGCD01077251;XM_005414983 XP_005415040 MODEL 8788760 protein-coding Ficd FIC domain protein adenylyltransferase ENCODES a protein that exhibits AMPylase activity (ortholog); ATP binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN protein adenylylation (ortholog); regulation of IRE1-mediated unfolded protein response (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 92 (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955455 9794919 9799006 + 102023776 AGCD01045930;GBDF01086000;XM_005396460;XM_005396461;XM_005396462;XM_013520486 XP_005396517;XP_005396518;XP_005396519;XP_013375940 MODEL 8965215 ncrna LOC102005907 uncharacterized LOC102005907 NW_004955410 11624781 11626736 - 102005907 AGCD01010829;GBDF01087824;XR_259837 MODEL 8880962 protein-coding Asb3 ankyrin repeat and SOCS box containing 3 INVOLVED IN gene expression (ortholog); host-mediated modulation of intestinal microbiota composition (ortholog); inflammatory response (ortholog); FOUND IN cytoplasm (ortholog) NW_004955441 19427843 19511583 - 102030004 AGCD01037347;AGCD01037348;GBCB01088659;XM_005391023;XM_005391024;XM_005391025;XM_013517555;XM_013517556;XM_013517557;XM_013517558;XM_013517559 XP_005391080;XP_005391081;XP_005391082;XP_013373009;XP_013373010;XP_013373011;XP_013373012;XP_013373013 MODEL 8940670 pseudo LOC102004874 F-box only protein 42-like NW_004955402 39161338 39165052 - 102004874 AGCD01000977 MODEL 39134484 misc_rna 7SK 7SK RNA 8717588 ncrna LOC102021394 uncharacterized LOC102021394 NW_004955547 1572431 1574209 - 102021394 AGCD01072233;GBBH01184529;XR_264902 MODEL 8723968 pseudo LOC102008864 solute carrier family 25 member 36-like NW_004955421 22468586 22469764 + 102008864 AGCD01022136 MODEL 8877065 ncrna LOC102007728 uncharacterized LOC102007728 NW_004955405 808318 848689 - 102007728 AGCD01004585;AGCD01004586;AGCD01004587;AGCD01004588;GBDF01303416;XR_259358 MODEL 8723365 pseudo LOC102011967 serine-rich single-pass membrane protein 1-like NW_004955411 5417085 5417628 - 102011967 AGCD01011638 MODEL 8774516 ncrna LOC102010003 uncharacterized LOC102010003 NW_004955447 16623757 16625250 + 102010003 AGCD01041095;GBDF01280990;XR_262438 MODEL 8762203 protein-coding Bad BCL2 associated agonist of cell death ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); cysteine-type endopeptidase activator activity (ortholog); lipid binding (ortholog); INVOLVED IN ADP metabolic process (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN BAD-BCL-2 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 20795585 20809039 + 102014914 AGCD01023087;AGCD01023088;AGCD01023089;GBDF01008867;XM_005384615;XM_005384616;XM_005384617;XM_005384618;XM_005384619;XM_005384620;XM_013514299 XP_005384672;XP_005384673;XP_005384674;XP_005384675;XP_005384676;XP_005384677;XP_013369753 MODEL 9052351 ncrna LOC102025165 uncharacterized LOC102025165 NW_004955532 1964848 1970998 + 102025165 AGCD01070208;GBBH01020719;XR_001232022;XR_264720 MODEL 8721613 ncrna LOC102003450 uncharacterized LOC102003450 NW_004955485 6812985 6814556 - 102003450 AGCD01058629;GBDF01041975;XR_263914 MODEL 9001965 protein-coding Gli4 GLI family zinc finger 4 ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955454 1996256 2004848 + 102022565 AGCD01044998;GBDI01207968;XM_013520033;XM_013520034;XM_013520035 XP_013375487;XP_013375488;XP_013375489 MODEL 9066885 protein-coding Bicdl2 BICD family like cargo adaptor 2 ENCODES a protein that exhibits small GTPase binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 14306144 14314060 + 102006166 AGCD01037810;GBCQ01178276;XM_005391372;XM_005391373 XP_005391429;XP_005391430 MODEL 8929770 protein-coding Ddx21 DExD-box helicase 21 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of myeloid dendritic cell cytokine production (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN B-WICH complex (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955437 22050029 22071213 - 102027231 AGCD01034927;GBDI01113648;XM_005390100 XP_005390157 MODEL 8792967 protein-coding LOC102006248 olfactory receptor 1B1 NW_004955419 5318963 5319916 - 102006248 AGCD01019801;XM_005382524 XP_005382581 MODEL 9032099 protein-coding Ptbp2 polypyrimidine tract binding protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); mRNA splice site recognition (ortholog); negative regulation of RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN growth cone (ortholog); neuronal cell body (ortholog); nucleus (ortholog) NW_004955435 1703588 1773016 + 102027223 AGCD01032752;AGCD01032753;GBCB01041750;GBDF01051639;XM_005388785;XM_013516507;XM_013516508;XM_013516509 XP_005388842;XP_013371961;XP_013371962;XP_013371963 MODEL 39131697 rrna 5S_rRNA 5S ribosomal RNA 10316775 ncrna LOC106149259 uncharacterized LOC106149259 NW_004955441 5527812 5549384 + 106149259 AGCD01036880;GBBH01149183;XR_001235310 MODEL 8759072 protein-coding Gpalpp1 GPALPP motifs containing 1 NW_004955518 2801528 2832207 + 102012467 AGCD01067784;AGCD01067785;GBDF01306250;XM_005409079;XM_005409080 XP_005409136;XP_005409137 MODEL 8913704 protein-coding LOC102024476 melanoma-associated antigen 10-like NW_004955498 4679377 4680138 + 102024476 AGCD01063015;XM_005406485 XP_005406542 MODEL 8731351 protein-coding LOC102004875 PRAME family member 12-like NW_004955608 52750 55759 + 102004875 AGCD01076996;XM_005414909 XP_005414966 MODEL 39132325 rrna 5S_rRNA 5S ribosomal RNA 8982558 protein-coding Kiaa2013 KIAA2013 ortholog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955486 1996057 2002308 + 102018735 AGCD01058978;AGCD01058979;GBBH01034213;XM_005404300 XP_005404357 MODEL 151707889 mirna MIRLET7G microRNA let-7g 10391191 ncrna LOC106147106 uncharacterized LOC106147106 NW_004955408 38852674 38865947 + 106147106 AGCD01009053;AGCD01009054;GBDK01293175;XR_001231863 MODEL 8974669 pseudo LOC102007388 pre-mRNA-splicing factor RBM22 pseudogene NW_004955402 42301725 42303062 - 102007388 AGCD01001038 MODEL 8785958 protein-coding Wdr13 WD repeat domain 13 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); INVOLVED IN negative regulation of type B pancreatic cell proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal atresia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955543 182279 190435 + 102022017 AGCD01071563;GBDJ01277750;XM_005411270;XM_005411271 XP_005411327;XP_005411328 MODEL 9043837 ncrna LOC102012371 uncharacterized LOC102012371 NW_004955443 10531041 10537221 - 102012371 AGCD01038378;GBBH01158501;XR_001235449 MODEL 8721345 protein-coding Ndufa10 NADH:ubiquinone oxidoreductase subunit A10 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955542 1329802 1370109 + 102020716 AGCD01071502;GBCB01005748;XM_005411173 XP_005411230 MODEL 10118818 ncrna LOC106150049 uncharacterized LOC106150049 NW_004955462 9262852 9264945 - 106150049 AGCD01049335;XR_001236612;XR_001236613;XR_001236614 MODEL 8814309 protein-coding Muc2 mucin 2, oligomeric mucus/gel-forming ENCODES a protein that exhibits cupric ion binding (ortholog); cuprous ion binding (ortholog); extracellular matrix structural constituent (ortholog); INVOLVED IN cellular response to interleukin-1; cellular response to tumor necrosis factor; apoptotic process (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); allergic conjunctivitis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); inner mucus layer (ortholog) NW_004955476 11108826 11135697 - 102011000 AGCD01055438;AGCD01055439;AGCD01055440;AGCD01055441;DQ826528;GBDF01028612;XM_013502905 ABI22172;XP_013358359 MODEL 9000713 protein-coding Cylc2 cylicin 2 INVOLVED IN acrosome assembly (ortholog); maintenance of cell number (ortholog); manchette assembly (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoskeletal calyx (ortholog); perinuclear theca (ortholog); sperm glycocalyx (ortholog) NW_004955419 23183700 23218555 - 102006350 AGCD01020315;AGCD01020316;AGCD01020317;GBDF01045355;XM_005382791;XM_013513110;XM_013513111;XM_013513112;XM_013513113;XM_013513114;XM_013513115;XM_013513116;XM_013513117;XM_013513118 XP_005382848;XP_013368564;XP_013368565;XP_013368566;XP_013368567;XP_013368568;XP_013368569;XP_013368570;XP_013368571;XP_013368572 MODEL 8870504 protein-coding LOC102018035 sialic acid-binding Ig-like lectin 8 NW_004955558 1238069 1248047 - 102018035 AGCD01073424;GBBH01137499;XM_005412701;XM_013508887;XM_013508888;XM_013508889;XM_013508890;XM_013508891;XM_013508892;XM_013508893;XM_013508894;XR_001232331;XR_001232332 XP_005412758;XP_013364341;XP_013364342;XP_013364343;XP_013364344;XP_013364345;XP_013364346;XP_013364347;XP_013364348 MODEL 8893433 protein-coding LOC102003087 eukaryotic translation initiation factor 1A, X-chromosomal-like NW_004955405 22619382 22620342 + 102003087 AGCD01005097;GBDF01111439;XM_005374400 XP_005374457 MODEL 8712650 protein-coding Hmox2 heme oxygenase 2 ENCODES a protein that exhibits heme oxygenase (decyclizing) activity (ortholog); INVOLVED IN response to hypoxia (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cerebral Hemorrhage (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955442 12913983 12947412 - 102010418 AGCD01037748;AGCD01037749;AGCD01037750;GBBH01007410;XM_005391291;XM_013517724 XP_005391348;XP_013373178 MODEL 9015535 protein-coding Fam234a family with sequence similarity 234 member A ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog) NW_004955442 16915630 16950809 - 102005425 AGCD01037923;AGCD01037924;AGCD01037925;GBCQ01010346;XM_005391667;XM_005391668 XP_005391724;XP_005391725 MODEL 8795468 protein-coding Ipo13 importin 13 ENCODES a protein that exhibits nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955537 3472866 3494552 + 102007936 AGCD01070959;GBCE01099023;XM_005410689;XM_013507752 XP_005410746;XP_013363206 MODEL 8791447 ncrna LOC102023102 uncharacterized LOC102023102 NW_004955404 2801452 2805235 - 102023102 AGCD01003265;GBDF01287830;XR_259294 MODEL 9063620 ncrna LOC102005908 uncharacterized LOC102005908 NW_004955410 34743414 34763395 - 102005908 AGCD01011404;GBDF01221838;XR_001232718 MODEL 39134174 misc_rna 7SK 7SK RNA 39134485 misc_rna 7SK 7SK RNA 8966949 protein-coding CUNH12orf56 chromosome unknown C12orf56 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); high grade glioma (ortholog) NW_004955458 11091456 11144074 - 102020531 AGCD01047717;AGCD01047718;AGCD01047719;AGCD01047720;AGCD01047721;AGCD01047722;AGCD01047723;GBBH01135200;GBDF01120995;XM_013520919 XP_013376373 MODEL 8759834 protein-coding Nudt21 nudix hydrolase 21 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA alternative polyadenylation (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog) NW_004955433 14220356 14234423 - 102015340 AGCD01031710;AGCD01031711;GBDI01064334;XM_005388349 XP_005388406 MODEL 8725768 ncrna LOC102021396 uncharacterized LOC102021396 NW_004955550 1116020 1133375 + 102021396 AGCD01072549;AGCD01072550;GBDF01084147;XR_001232258 MODEL 8952687 ncrna LOC102008867 uncharacterized LOC102008867 NW_004955494 7040036 7040325 - 102008867 AGCD01061545;GBDF01288756;XR_264117 MODEL 8885644 pseudo LOC102011971 60S ribosomal protein L3 pseudogene NW_004955468 5498734 5501315 - 102011971 AGCD01051971;XR_263421 MODEL 9046128 protein-coding Sesn1 sestrin 1 ENCODES a protein that exhibits L-leucine binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); GATOR2 complex (ortholog) NW_004955411 34033986 34051171 - 102015489 AGCD01012378;AGCD01012379;GBCB01023930;GBDF01121431;XM_013510807 XP_013366261 MODEL 8948042 protein-coding Csf3 colony stimulating factor 3 ENCODES a protein that exhibits cytokine activity (ortholog); enzyme binding (ortholog); granulocyte colony-stimulating factor receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); granulocyte colony-stimulating factor signaling pathway (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN extracellular region (ortholog) NW_004955451 14688181 14690126 + 102007963 AGCD01043566;GBDJ01195230;XM_005394341 XP_005394398 MODEL 8990296 protein-coding Trnt1 tRNA nucleotidyl transferase 1 ENCODES a protein that exhibits CCA tRNA nucleotidyltransferase activity (ortholog); CCACCA tRNA nucleotidyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial tRNA 3'-end processing (ortholog); rescue of stalled cytosolic ribosome (ortholog); tRNA 3'-terminal CCA addition (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955421 10192065 10211527 - 102021249 AGCD01021870;GBBH01037146;XM_005383747;XM_005383748;XM_005383749 XP_005383804;XP_005383805;XP_005383806 MODEL 8724999 protein-coding Naa11 N-alpha-acetyltransferase 11, NatA catalytic subunit ENCODES a protein that exhibits protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN N-terminal protein amino acid acetylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN cytosol (ortholog); NatA complex (ortholog); nucleoplasm (ortholog) NW_004955433 3653046 3662924 - 102023729 AGCD01031432;GBDF01161781;XM_005388215 XP_005388272 MODEL 8970631 ncrna LOC102003456 uncharacterized LOC102003456 NW_004955492 6404109 6413616 + 102003456 AGCD01060766;GBDF01016640;XR_001231259;XR_001231260;XR_264055 MODEL 9052174 protein-coding Bag1 BAG cochaperone 1 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); phosphoprotein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of motor neuron apoptotic process (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955472 2394317 2405199 + 102015835 AGCD01053458;AGCD01053459;GBDF01006247;GBDJ01083605;XM_013522952;XM_013522953 XP_013378406;XP_013378407 MODEL 8855738 protein-coding LOC102025166 HLA class II histocompatibility antigen, DO alpha chain ENCODES a protein that exhibits MHC class II protein complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); negative regulation of antigen processing and presentation of peptide antigen via MHC class II (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN MHC class II protein complex (ortholog) NW_004955437 1603395 1606800 - 102025166 AGCD01034219;GBDI01009349;XM_005389464;XM_005389465;XM_013516976;XM_013516977 XP_005389521;XP_005389522;XP_013372430;XP_013372431 MODEL 8822107 protein-coding Heatr6 HEAT repeat containing 6 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955451 204952 239572 + 102018353 AGCD01042928;AGCD01042929;AGCD01042930;GBDF01078305;XM_005393906 XP_005393963 MODEL 9062225 protein-coding Glipr1 GLI pathogenesis related 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); nephroblastoma (ortholog) NW_004955405 14840731 14851111 + 102009571 AGCD01004933;GBCB01098958;XM_005374335 XP_005374392 MODEL 8709179 protein-coding Plcg2 phospholipase C gamma 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); phosphorylation-dependent protein binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); antifungal innate immune response (ortholog); B cell activation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intracellular vesicle (ortholog) NW_004955522 4352890 4480735 + 102007928 AGCD01068416;AGCD01068417;AGCD01068418;AGCD01068419;AGCD01068420;AGCD01068421;AGCD01068422;GBCE01092331;GBDJ01422643;XM_013507097 XP_013362551 MODEL 8984501 protein-coding Ddx23 DEAD-box helicase 23 ENCODES a protein that exhibits helicase activity (ortholog); INVOLVED IN R-loop processing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); complex cortical dysplasia with other brain malformations 14B (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955500 7685954 7698880 - 102008435 AGCD01063940;AGCD01063941;GBCE01056276;XM_005406669;XM_005406670;XM_013505643 XP_005406726;XP_005406727;XP_013361097 MODEL 9052216 protein-coding Snrpc small nuclear ribonucleoprotein polypeptide C ENCODES a protein that exhibits protein homodimerization activity (ortholog); single-stranded RNA binding (ortholog); U1 snRNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 2770251 2830871 + 102019321 AGCD01034286;AGCD01034287;AGCD01034288;GBDF01144864;XM_013516970;XM_013516971 XP_013372424;XP_013372425 MODEL 8786017 pseudo LOC102024477 serine/threonine-protein kinase Nek2 pseudogene NW_004955424 14868186 14869112 + 102024477 AGCD01024661 MODEL 8699697 pseudo LOC102010809 protein FAM161A pseudogene NW_004955419 28597487 28599260 - 102010809 AGCD01020469 MODEL 8769850 protein-coding Asb4 ankyrin repeat and SOCS box containing 4 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of vasculogenesis (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); high grade glioma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955432 12078104 12137988 + 102018313 AGCD01030964;AGCD01030965;AGCD01030966;AGCD01030967;GBCB01024791;XM_005388065 XP_005388122 MODEL 8879409 protein-coding LOC102007735 uncharacterized LOC102007735 NW_004955455 3711041 3735232 - 102007735 AGCD01045648;XM_005396209;XR_001236266 XP_005396266 MODEL 8757125 protein-coding Gabra5 gamma-aminobutyric acid type A receptor subunit alpha5 ENCODES a protein that exhibits GABA receptor binding (ortholog); GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral fear response (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN cell body (ortholog); dendrite (ortholog); GABA-A receptor complex (ortholog) NW_004955533 2563499 2631086 - 102025838 AGCD01070395;AGCD01070396;GBDF01288074;XM_005410411;XM_005410412 XP_005410468;XP_005410469 MODEL 39132327 rrna 5S_rRNA 5S ribosomal RNA 10281946 ncrna LOC106147107 uncharacterized LOC106147107 NW_004955520 3406551 3408481 + 106147107 AGCD01068102;GBDI01198126;XR_001231865 MODEL 9008714 protein-coding Kics2 KICSTOR subunit 2 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); negative regulation of TORC1 signaling (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 83 (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN KICSTOR complex (ortholog) NW_004955458 11027550 11048563 - 102008505 AGCD01047714;AGCD01047715;GBBH01193744;GBDF01082041;XM_013520920 XP_013376374 MODEL 8719759 protein-coding LOC102007390 EKC/KEOPS complex subunit LAGE3-like NW_004955595 891199 900679 + 102007390 AGCD01076488;AGCD01076489;AGCD01076490;GBDK01408734;XM_005414678 XP_005414735 MODEL 8904982 pseudo LOC102007740 39S ribosomal protein L47, mitochondrial pseudogene NW_004955459 7511838 7512274 + 102007740 AGCD01048113 MODEL 9032182 protein-coding LOC102005207 tetratricopeptide repeat protein 30B NW_004955403 19185628 19196278 + 102005207 AGCD01002119;GBCE01133727;XM_005373399 XP_005373456 MODEL 8728506 protein-coding Bicra BRD4 interacting chromatin remodeling complex associated protein ENCODES a protein that exhibits transcription regulator activator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog); SWI/SNF complex (ortholog) NW_004955574 1463656 1484709 + 102018239 AGCD01075180;AGCD01075181;GBCB01112015;GBCE01142278;XM_013509545 XP_013364999 MODEL 9058436 protein-coding LOC102006251 olfactory receptor 13C3-like NW_004955419 21880670 21881698 + 102006251 AGCD01020289;XM_013513142 XP_013368596 MODEL 39132328 rrna 5S_rRNA 5S ribosomal RNA 8857812 protein-coding Wdr17 WD repeat domain 17 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955403 31559972 31658899 - 102017620 AGCD01002421;AGCD01002422;GBDK01228794;XM_005373519;XM_005373520;XM_005373521 XP_005373576;XP_005373577;XP_005373578 MODEL 39131698 rrna 5S_rRNA 5S ribosomal RNA 8831464 protein-coding Fig4 FIG4 phosphoinositide 5-phosphatase ENCODES a protein that exhibits phosphatidylinositol bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process (ortholog); locomotory behavior (ortholog); myelin assembly (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 11 (ortholog); FOUND IN endosome membrane (ortholog); PAS complex (ortholog); recycling endosome (ortholog) NW_004955411 3135752 3217891 - 102015087 AGCD01011539;AGCD01011540;AGCD01011541;AGCD01011542;GBDF01046654;GBDF01121439;XM_005377617 XP_005377674 MODEL 8991425 protein-coding Ptbp3 polypyrimidine tract binding protein 3 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); negative regulation of RNA splicing (ortholog); regulation of cell differentiation (ortholog) NW_004955419 15002780 15101588 + 102005474 AGCD01020055;AGCD01020056;AGCD01020057;GBDF01088480;GBDF01088481;XM_013513256;XM_013513257;XM_013513258;XM_013513259 XP_013368710;XP_013368711;XP_013368712;XP_013368713 MODEL 8965466 ncrna LOC102018040 uncharacterized LOC102018040 NW_004955577 358724 365029 - 102018040 AGCD01075392;GBDF01178865;XR_001232463;XR_265079 MODEL 8756630 protein-coding Gpam glycerol-3-phosphate acyltransferase, mitochondrial ENCODES a protein that exhibits glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); cellular response to insulin stimulus (ortholog); defense response to virus (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955431 17291890 17363611 - 102027100 AGCD01030406;AGCD01030407;GBCB01076097;XM_005387756;XM_005387757;XM_005387758;XM_005387759;XM_013515885 XP_005387813;XP_005387814;XP_005387815;XP_005387816;XP_013371339 MODEL 8936361 protein-coding Cyld CYLD lysine 63 deubiquitinase ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); homeostasis of number of cells (ortholog); innate immune response (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Brooke-Spiegler syndrome (ortholog); cervical cancer (ortholog); Frontotemporal Dementia and/or Amyotrophic Lateral Sclerosis-8 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955433 8788867 8845925 + 102017373 AGCD01031603;GBDF01085055;XM_005388274;XM_005388275;XM_005388276;XM_005388277;XM_005388278;XM_005388279 XP_005388331;XP_005388332;XP_005388333;XP_005388334;XP_005388335;XP_005388336 MODEL 9056715 protein-coding Fam234b family with sequence similarity 234 member B ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN postsynaptic Golgi apparatus (ortholog) NW_004955413 9899940 9932050 + 102021957 AGCD01013917;AGCD01013918;GBCE01023713;XM_005378980 XP_005379037 MODEL 39134175 misc_rna 7SK 7SK RNA 9005605 ncrna LOC102013496 uncharacterized LOC102013496 NW_004955414 14859238 14895910 - 102013496 AGCD01015161;GBDF01156200;XR_260169;XR_260170 MODEL 8728972 pseudo LOC102012373 ubiquitin-conjugating enzyme E2 Q1 pseudogene NW_004955444 9094091 9096386 + 102012373 AGCD01038958 MODEL 10179051 ncrna LOC106150050 uncharacterized LOC106150050 NW_004955402 13908202 13918596 + 106150050 AGCD01000418;GBDF01289313;XR_001236616 MODEL 8793086 protein-coding LOC102008868 CD70 antigen-like NW_004955495 3023146 3026631 - 102008868 AGCD01061815;GBDK01116023;XM_005405704;XM_005405705;XM_013505038;XM_013505039 XP_005405761;XP_005405762;XP_013360492;XP_013360493 MODEL 8737599 protein-coding LOC102011975 olfactory receptor 52B2-like NW_004955414 21918896 21919849 - 102011975 AGCD01015437;XM_005380105 XP_005380162 MODEL 39132510 snrna U6 U6 spliceosomal RNA 9032804 ncrna LOC102003089 uncharacterized LOC102003089 NW_004955406 36472700 36585512 - 102003089 AGCD01006556;AGCD01006557;AGCD01006558;AGCD01006559;GBDF01249792;XR_001236830;XR_001236832;XR_001236833 MODEL 8976366 protein-coding Heatr9 HEAT repeat containing 9 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); response to cytokine (ortholog); response to virus (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955481 10279135 10291085 - 102021444 AGCD01057138;AGCD01057139;GBDF01088533;XM_005402893;XM_005402895 XP_005402950;XP_005402952 MODEL 8763435 protein-coding Hmx1 H6 family homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog) NW_004955514 2441234 2442478 + 102005494 AGCD01067081;GBDF01179009;XM_005408766 XP_005408823 MODEL 8842893 protein-coding LOC102004876 PRAME family member 12-like NW_004955615 158242 175579 - 102004876 AGCD01077251;XM_005414982 XP_005415039 MODEL 8757043 ncrna LOC102023105 uncharacterized LOC102023105 NW_004955405 9650121 9655145 - 102023105 AGCD01004786;GBDF01146714;XR_001235294 MODEL 8816416 ncrna LOC102005909 uncharacterized LOC102005909 NW_004955411 1623772 1628626 - 102005909 AGCD01011485;GBDF01224028;XR_001232783;XR_259911 MODEL 9026136 pseudo LOC102010005 39S ribosomal protein L47, mitochondrial pseudogene NW_004955449 1853430 1854383 + 102010005 AGCD01041814;XM_005393196 MODEL 8713662 pseudo LOC102023454 ferritin heavy chain-like NW_004955466 10676155 10735470 - 102023454 AGCD01051071;AGCD01051072;AGCD01051073;XR_263303 MODEL 8712981 protein-coding Ndufa11 NADH:ubiquinone oxidoreductase subunit A11 ASSOCIATED WITH communication disorder (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955495 3557016 3564999 + 102022306 AGCD01061862;GBDK01308518;XM_005405752 XP_005405809 MODEL 8783733 protein-coding Asb5 ankyrin repeat and SOCS box containing 5 ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955403 31498343 31537605 + 102016870 AGCD01002420;AGCD01002421;GBDF01231618;XM_005373516;XM_005373517;XM_005373518 XP_005373573;XP_005373574;XP_005373575 MODEL 8846431 protein-coding LOC102010812 zinc finger protein 35 NW_004955420 26847358 26895078 - 102010812 AGCD01021434;AGCD01021435;GBCB01086637;XM_013513410;XM_013513411;XM_013513412;XM_013513413;XM_013513414;XM_013513415 XP_013368864;XP_013368865;XP_013368866;XP_013368867;XP_013368868;XP_013368869 MODEL 8773382 protein-coding Gabra6 gamma-aminobutyric acid type A receptor subunit alpha6 ENCODES a protein that exhibits benzodiazepine receptor activity (ortholog); diazepam binding (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN response to ethanol (ortholog); synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Binge Drinking (ortholog); childhood absence epilepsy (ortholog); FOUND IN cerebellar Golgi cell to granule cell synapse (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) NW_004955408 15464426 15479653 + 102030390 AGCD01008420;XM_005376274 XP_005376331 MODEL 8849954 protein-coding Sesn2 sestrin 2 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); L-leucine binding (ortholog); peroxidase activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytoplasm (ortholog); GATOR2 complex (ortholog) NW_004955452 7392644 7417204 + 102014203 AGCD01044151;AGCD01044152;AGCD01044153;AGCD01044154;GBBH01131789;GBDF01160814;XM_005394946 XP_005395003 MODEL 8912283 protein-coding Muc20 mucin 20, cell surface associated ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN hepatocyte growth factor receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); cervical cancer (ortholog); FOUND IN basal plasma membrane (ortholog) NW_004955420 12212666 12234213 + 102023481 AGCD01020857;GBBH01035104;XM_013513369;XM_013513370 XP_013368823;XP_013368824 MODEL 9008564 pseudo LOC102003467 laccase domain-containing protein 1 pseudogene NW_004955425 25984730 25986065 - 102003467 AGCD01025940 MODEL 8934593 pseudo LOC102007392 aldose reductase-related protein 2 pseudogene NW_004955450 13309903 13310837 + 102007392 AGCD01042733 MODEL 8734059 pseudo LOC102005209 peptidyl-prolyl cis-trans isomerase D pseudogene NW_004955762 7725 8459 + 102005209 AGCD01078304 MODEL 39134486 misc_rna 7SK 7SK RNA 9037478 protein-coding Ipo4 importin 4 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); INVOLVED IN protein import into nucleus (ortholog); protein localization to nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955409 36214704 36223714 + 102007412 AGCD01010453;GBDI01123457;XM_005377029 XP_005377086 MODEL 8822652 protein-coding Wdr18 WD repeat domain 18 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 6869543 6877058 - 102014147 AGCD01062099;GBCQ01121381;XM_005406002 XP_005406059 MODEL 9006577 ncrna LOC102024478 uncharacterized LOC102024478 NW_004955502 1117433 1121988 + 102024478 AGCD01064258;GBDF01193812;XR_001231533 MODEL 9003348 protein-coding LOC102021397 olfactory receptor 4K15-like NW_004955550 492121 493077 - 102021397 AGCD01072509;XM_005412131 XP_005412188 MODEL 8764778 protein-coding Mis12 MIS12 kinetochore complex component INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN kinetochore (ortholog); MIS12/MIND type complex (ortholog); nucleus (ortholog) NW_004955467 10837570 10842131 + 102028945 AGCD01051586;GBDF01159192;XM_005399649;XM_005399650 XP_005399706;XP_005399707 MODEL 8745090 protein-coding Nudt22 nudix hydrolase 22 ENCODES a protein that exhibits UDP-sugar diphosphatase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 20848450 20851913 - 102021774 AGCD01023094;AGCD01023095;GBDF01086382;XM_005384643;XM_013513958 XP_005384700;XP_013369412 MODEL 8966527 pseudo LOC102010007 inaD-like protein pseudogene NW_004955402 42875359 42877029 - 102010007 AGCD01001050 MODEL 39134176 misc_rna 7SK 7SK RNA 8838420 protein-coding Naa15 N-alpha-acetyltransferase 15, NatA auxiliary subunit ENCODES a protein that exhibits acetyltransferase activity (ortholog); N-acetyltransferase activity (ortholog); ribosome binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein maturation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); atopic dermatitis (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) NW_004955428 4243970 4337357 - 102018516 AGCD01027673;AGCD01027674;AGCD01027675;AGCD01027676;AGCD01027677;AGCD01027678;GBBH01188857;XM_005386689;XM_005386690;XM_005386692;XM_013515312;XM_013515313;XM_013515314 XP_005386746;XP_005386747;XP_005386749;XP_013370766;XP_013370767;XP_013370768 MODEL 10315943 ncrna LOC106149260 uncharacterized LOC106149260 NW_004955441 5829499 5839370 - 106149260 AGCD01036888;XR_001235311 MODEL 8779766 protein-coding Bag2 BAG cochaperone 2 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of protein ubiquitination (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Carpenter syndrome 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic microtubule (ortholog) NW_004955502 2984233 2994457 - 102026767 AGCD01064307;AGCD01064308;GBCB01002701;XM_013505839 XP_013361293 MODEL 10379247 ncrna LOC106147108 uncharacterized LOC106147108 NW_004955520 2211707 2219585 - 106147108 AGCD01068077;GBCQ01188583;XR_001231866 MODEL 9068247 pseudo LOC102025167 THUMP domain-containing protein 3 pseudogene NW_004955534 1630167 1631771 - 102025167 AGCD01070504 MODEL 8964690 protein-coding Kidins220 kinase D interacting substrate 220 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein kinase regulator activity (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); dendrite morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); late endosome (ortholog); postsynapse (ortholog) NW_004955487 782683 862079 + 102007667 AGCD01059231;AGCD01059232;AGCD01059233;AGCD01059234;GBDK01009188;XM_005404341;XM_005404344;XM_005404345;XM_013504353;XM_013504354;XM_013504355;XM_013504356 XP_005404398;XP_005404401;XP_005404402;XP_013359807;XP_013359808;XP_013359809;XP_013359810 MODEL 8784216 ncrna LOC102008869 uncharacterized LOC102008869 NW_004955423 21824204 21851556 + 102008869 AGCD01023949;GBCQ01142430;XR_260986 MODEL 10378174 ncrna LOC106150051 uncharacterized LOC106150051 NW_004955462 2601698 2610948 - 106150051 AGCD01049177;XR_001236617 MODEL 8976092 protein-coding Ddx24 DEAD-box helicase 24 PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955438 16100345 16116377 - 102011698 AGCD01035395;GBCB01039889;XM_005390365 XP_005390422 MODEL 8783437 ncrna LOC102006252 uncharacterized LOC102006252 NW_004955486 9666236 9670686 - 102006252 AGCD01059195;GBDK01396724;XR_001231108;XR_001231109;XR_001231110;XR_001231111;XR_001231112;XR_263975;XR_263977 MODEL 39131699 rrna 5S_rRNA 5S ribosomal RNA 8716527 protein-coding Figla folliculogenesis specific bHLH transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); genetic disease (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955424 14393566 14402971 + 102003889 AGCD01024654;GBDF01007679;XM_013514581;XM_013514582 XP_013370035;XP_013370036 MODEL 8856898 protein-coding LOC102011976 lysozyme C-like NW_004955470 12811161 12816338 - 102011976 AGCD01052943;GBCC01001129;XM_005400814 XP_005400871 MODEL 8916684 protein-coding Plch1 phospholipase C eta 1 ENCODES a protein that exhibits lysophospholipase C activity (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol-mediated signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955448 6588885 6815087 - 102015257 AGCD01041393;GBDJ01114723;XM_005393067;XM_013518675;XM_013518676;XM_013518677 XP_005393124;XP_013374129;XP_013374130;XP_013374131 MODEL 8868170 protein-coding Hebp1 heme binding protein 1 ENCODES a protein that exhibits heme binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955413 9832441 9856733 - 102021644 AGCD01013913;AGCD01013914;AGCD01013915;GBDK01235511;XM_005378979 XP_005379036 MODEL 39131334 protein-coding CYREN cell cycle regulator of NHEJ 9017465 trna trnV(tac) tRNA-Val MT 1021 1087 + 15822216 10304148 protein-coding Fam237a family with sequence similarity 237 member A INVOLVED IN regulation of feeding behavior (ortholog); FOUND IN extracellular region (ortholog) NW_004955457 8335357 8340060 - 106149909 AGCD01046907;XM_013520663 XP_013376117 MODEL 8858898 pseudo LOC102023107 corepressor interacting with RBPJ 1 pseudogene NW_004955405 17684218 17787002 - 102023107 AGCD01005002;AGCD01005003;AGCD01005004;AGCD01005005;AGCD01005006;AGCD01005007;AGCD01005008 MODEL 9012587 pseudo LOC102013497 programmed cell death protein 5 pseudogene NW_004955414 20055216 20055636 - 102013497 AGCD01015354 MODEL 9003011 pseudo LOC102012374 methyl-CpG-binding domain protein 3-like 2 pseudogene NW_004955563 759987 761698 + 102012374 AGCD01074086;XM_005413203 MODEL 9026414 protein-coding Csf3r colony stimulating factor 3 receptor ENCODES a protein that exhibits granulocyte colony-stimulating factor binding (ortholog); INVOLVED IN amelogenesis (ortholog); neutrophil chemotaxis (ortholog); regulation of myeloid cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bacterial pneumonia (ortholog); Breast Cancer, Familial (ortholog) NW_004955452 14409484 14425818 - 102007185 AGCD01044466;GBDK01198532;XM_005395200;XM_013519565;XM_013519566;XM_013519567;XM_013519568;XM_013519569;XM_013519570;XM_013519571 XP_005395257;XP_013375019;XP_013375020;XP_013375021;XP_013375022;XP_013375023;XP_013375024;XP_013375025 MODEL 39132331 rrna 5S_rRNA 5S ribosomal RNA 8972209 protein-coding Glipr1l1 GLIPR1 like 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); protein localization involved in acrosome reaction (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog); membrane raft (ortholog) NW_004955405 14710789 14755709 + 102007500 AGCD01004932;AGCD01004933;GBDF01047635;XM_005374327;XM_005374328 XP_005374384;XP_005374385 MODEL 39132514 snrna U6 U6 spliceosomal RNA 8884400 protein-coding Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); connective tissue disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955402 10283970 10294869 + 102028039 AGCD01000256;AGCD01000257;AGCD01000258;GBDK01005303;XM_005372689;XM_005372690 XP_005372746;XP_005372747 MODEL 9011573 ncrna LOC102003096 uncharacterized LOC102003096 NW_004955458 14817424 14818448 + 102003096 AGCD01047848;GBDF01118725;XR_262998 MODEL 9060254 pseudo LOC102018045 laccase domain-containing protein 1-like NW_004955592 623122 623565 - 102018045 AGCD01076320 MODEL 8728732 pseudo LOC102005210 bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA pseudogene NW_004955403 36749260 36750838 + 102005210 AGCD01002547 MODEL 9006063 protein-coding Ptcd2 pentatricopeptide repeat domain 2 INVOLVED IN heart development (ortholog); kidney development (ortholog); liver development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955575 1126978 1156727 + 102004763 AGCD01075233;GBDJ01350323;XM_005413937;XM_005413938;XM_013509609 XP_005413994;XP_005413995;XP_013365063 MODEL 8895009 protein-coding LOC102022746 polyamine-modulated factor 1 NW_004955545 2365047 2379720 + 102022746 AGCD01071898;GBCQ01129495;XM_005411660 XP_005411717 MODEL 8789152 protein-coding LOC102004878 transcription initiation factor TFIID subunit 3-like NW_004955761 1438 19347 - 102004878 AGCD01078303;GBCB01040970;GBDK01318503;XM_005415095 XP_005415152 MODEL 9068228 protein-coding Bicral BICRA like chromatin remodeling complex associated protein ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN SWI/SNF complex (ortholog) NW_004955437 8841830 8896391 + 102024273 AGCD01034501;AGCD01034502;AGCD01034503;AGCD01034504;AGCD01034505;AGCD01034506;GBDI01047312;XM_005389724;XM_005389725 XP_005389781;XP_005389782 MODEL 8912303 pseudo LOC102024482 lymphoid-restricted membrane protein-like NW_004955504 5887375 5889998 - 102024482 AGCD01064907;XM_005407090 MODEL 8956187 protein-coding Hmx2 H6 family homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); inner ear morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH High Myopia (ortholog) NW_004955477 1294479 1302433 + 102026107 AGCD01055504;GBDF01273104;XM_005401958;XM_005401959 XP_005402015;XP_005402016 MODEL 8844299 protein-coding Gpank1 G-patch domain and ankyrin repeats 1 ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955437 207563 211374 - 102019526 AGCD01034110;AGCD01034111;GBCQ01150662;XM_005389351;XM_005389352 XP_005389408;XP_005389409 MODEL 8969955 pseudo LOC102005910 nicotinamide phosphoribosyltransferase-like NW_004955463 5062434 5074910 - 102005910 AGCD01049628;AGCD01049629 MODEL 8950165 protein-coding Fign fidgetin, microtubule severing factor ASSOCIATED WITH Developmental Disease (ortholog); melanoma (ortholog); thymoma (ortholog); FOUND IN nuclear matrix (ortholog) NW_004955449 10271125 10400631 + 102015258 AGCD01042070;AGCD01042071;AGCD01042072;GBDF01297223;XM_005393306;XM_005393307;XM_013518797 XP_005393363;XP_005393364;XP_013374251 MODEL 8782305 pseudo LOC102023455 peroxiredoxin-6-like NW_004955466 13303704 13320547 + 102023455 AGCD01051156 MODEL 8809823 pseudo LOC102010813 60S ribosomal protein L7-like 1 pseudogene NW_004955421 23607848 23608582 + 102010813 AGCD01022191 MODEL 10080999 protein-coding Ndufa12 NADH:ubiquinone oxidoreductase subunit A12 INVOLVED IN mitochondrial ATP synthesis coupled electron transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955405 31607182 31621538 - 106149466 AGCD01005299;GBBH01030741;GBDF01052506;XM_013518426 XP_013373880 MODEL 9060584 trna trnW(tca) tRNA-Trp MT 4942 5010 + 15822204 8821840 protein-coding LOC102010015 probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 NW_004955785 867 11463 + 102010015 AGCD01078339;AGCD01078340;AGCD01078341;AGCD01078342;XM_013510191 XP_013365645 MODEL 9019168 protein-coding Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); GABA receptor binding (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); central nervous system neuron development (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autistic disorder (ortholog); colon adenocarcinoma (ortholog); FOUND IN dendrite (ortholog); GABA-A receptor complex (ortholog); GABA-ergic synapse (ortholog) NW_004955443 1126223 1514291 - 102028346 AGCD01038129;AGCD01038130;AGCD01038131;AGCD01038132;AGCD01038133;AGCD01038134;AGCD01038135;AGCD01038136;AGCD01038137;GBDF01060787;XM_005391892;XM_013518089;XM_013518091 XP_005391949;XP_013373543;XP_013373545 MODEL 8924483 protein-coding Muc21 mucin 21, cell surface associated INVOLVED IN negative regulation of cell-cell adhesion (ortholog); negative regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955583 898164 901874 + 102006406 AGCD01075873;GBDJ01391046;XM_005414353 XP_005414410 MODEL 8865511 pseudo LOC102003469 integrator complex subunit 10-like NW_004955426 26056064 26062306 + 102003469 AGCD01026736;AGCD01026737 MODEL 8946101 ncrna LOC102025169 uncharacterized LOC102025169 NW_004955537 234120 234410 + 102025169 AGCD01070855;GBDI01045663;XR_264769 MODEL 8892776 ncrna LOC102007395 uncharacterized LOC102007395 NW_004955451 5460378 5468253 + 102007395 AGCD01043168;GBBH01102354;XR_262581 MODEL 39134487 misc_rna 7SK 7SK RNA 39131700 rrna 5S_rRNA 5S ribosomal RNA 8801756 protein-coding Wdr19 WD repeat domain 19 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cilium assembly (ortholog); digestive system development (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle A (ortholog); motile cilium (ortholog) NW_004955443 8053847 8122918 - 102028692 AGCD01038308;AGCD01038309;AGCD01038310;GBCQ01123355;XM_005391986 XP_005392043 MODEL 8926325 protein-coding Mis18a MIS18 kinetochore protein A ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN CENP-A containing chromatin assembly (ortholog); chromosome segregation (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN CENP-A recruiting complex (ortholog); chromosome, centromeric region (ortholog) NW_004955407 31799537 31813897 - 102014869 AGCD01007662;GBDJ01404397;XM_005375663 XP_005375720 MODEL 8727392 protein-coding LOC102007742 probable C-mannosyltransferase DPY19L2 NW_004955460 7871421 7960495 + 102007742 AGCD01048500;AGCD01048501;AGCD01048502;AGCD01048503;AGCD01048504;AGCD01048505;AGCD01048506;AGCD01048507;AGCD01048508;GBDF01196111;XM_013521290;XM_013521291;XM_013521292 XP_013376744;XP_013376745;XP_013376746 MODEL 8821383 protein-coding Nudt3 nudix hydrolase 3 ENCODES a protein that exhibits 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity (ortholog); 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); diphosphoinositol-polyphosphate diphosphatase activity (ortholog); INVOLVED IN diadenosine hexaphosphate catabolic process (ortholog); diphosphoinositol polyphosphate catabolic process (ortholog); RNA decapping (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955437 2497720 2584280 - 102016516 AGCD01034271;AGCD01034272;AGCD01034273;AGCD01034274;AGCD01034275;AGCD01034276;AGCD01034277;GBCB01004639;XM_005389524 XP_005389581 MODEL 8806961 ncrna LOC102023108 uncharacterized LOC102023108 NW_004955453 16715278 16718568 + 102023108 AGCD01044910;GBDF01285863;XR_262757 MODEL 10360989 ncrna LOC106149261 uncharacterized LOC106149261 NW_004955441 13884810 13886761 - 106149261 AGCD01037163;XR_001235316 MODEL 10353890 ncrna LOC106147109 uncharacterized LOC106147109 NW_004955520 2697649 2699840 + 106147109 AGCD01068082;XR_001231867 MODEL 8932699 protein-coding CUNH12orf73 chromosome unknown C12orf73 homolog INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH sarcoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955405 38651787 38656564 - 102008056 AGCD01005482;GBBH01003432;XM_005374579 XP_005374636 MODEL 8870975 protein-coding Sesn3 sestrin 3 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); GATOR2 complex (ortholog); TORC2 complex (ortholog) NW_004955412 100335 125395 - 102027390 AGCD01012481;GBBH01141125;GBDF01041588;XM_013511114 XP_013366568 MODEL 8924825 trna trnY(gta) tRNA-Tyr MT 5259 5325 - 15822224 8931988 protein-coding Bag3 BAG cochaperone 3 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); protein-containing complex binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to heat (ortholog); cellular response to mechanical stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955551 446322 468329 + 102011814 AGCD01072656;AGCD01072657;GBBH01114721;XM_005412164;XM_013508589;XM_013508590 XP_005412221;XP_013364043;XP_013364044 MODEL 9046532 protein-coding Kif11 kinesin family member 11 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN mitotic centrosome separation (ortholog); mitotic spindle assembly (ortholog); regulation of mitotic centrosome separation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aneuploidy (ortholog); Ataxia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955425 764382 804856 - 102006047 AGCD01025201;AGCD01025202;GBDI01293707;XM_005385823 XP_005385880 MODEL 10281984 ncrna LOC106150052 uncharacterized LOC106150052 NW_004955462 8680506 8687963 + 106150052 AGCD01049324;GBCE01042961;XR_001236618 MODEL 8845578 protein-coding Glipr1l2 GLIPR1 like 2 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955405 14761839 14796335 + 102009008 AGCD01004933;GBDF01224215;XM_005374333 XP_005374390 MODEL 39132517 snrna U6 U6 spliceosomal RNA 8957681 protein-coding Ddx25 DEAD-box helicase 25 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); regulation of translation (ortholog); spermatid development (ortholog); ASSOCIATED WITH azoospermia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 26952655 26973758 + 102027281 AGCD01013224;AGCD01013225;GBDF01007483;XM_005378483;XR_260027 XP_005378540 MODEL 8905163 protein-coding Ipo5 importin 5 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); NLS-bearing protein import into nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955404 12416755 12480281 - 102018053 AGCD01003461;AGCD01003462;AGCD01003463;GBCB01002187;GBDF01004438;XM_005374083;XM_013516134 XP_005374140;XP_013371588 MODEL 8860912 protein-coding Hebp2 heme binding protein 2 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955436 21167519 21174559 - 102017497 AGCD01034048;GBBH01062001;GBCB01044274;XM_005389276 XP_005389333 MODEL 9013619 pseudo LOC102022751 protein kinase C iota type-like NW_004955561 1157274 1161309 - 102022751 AGCD01073839;AGCD01073840 MODEL 8782728 protein-coding Plch2 phospholipase C eta 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol metabolic process (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955486 8717799 8785144 - 102007236 AGCD01059155;AGCD01059156;GBBH01188538;XM_013504169;XM_013504170;XM_013504172;XM_013504173;XM_013504174 XP_013359623;XP_013359624;XP_013359626;XP_013359627;XP_013359628 MODEL 8778323 protein-coding LOC102011979 protein unc-13 homolog B NW_004955472 869993 1019542 - 102011979 AGCD01053364;AGCD01053365;AGCD01053366;AGCD01053367;GBDF01156325;GBDK01081960;XM_013522964;XM_013522965;XM_013522966;XM_013522967 XP_013378418;XP_013378419;XP_013378420;XP_013378421 MODEL 8912829 protein-coding Cyria CYFIP related Rac1 interactor A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955487 9545639 9636183 - 102013618 AGCD01059461;GBCE01085376;XM_005404447;XM_005404449;XM_013504374 XP_005404504;XP_005404506;XP_013359828 MODEL 8770150 protein-coding Naa16 N-alpha-acetyltransferase 16, NatA auxiliary subunit ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN protein maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); NatA complex (ortholog) NW_004955518 4882437 4933001 - 102029217 AGCD01067844;AGCD01067845;AGCD01067846;GBDK01352177;XM_013506953 XP_013362407 MODEL 9029460 protein-coding Hmx3 H6 family homeobox 3 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN brain development (ortholog); ear development (ortholog); embryo implantation (ortholog) NW_004955477 1288484 1290205 + 102010580 AGCD01055503;AGCD01055504;GBDF01059354;XM_005402079 XP_005402136 MODEL 9022999 protein-coding Asb6 ankyrin repeat and SOCS box containing 6 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955570 1747965 1752728 - 102021059 AGCD01074828;GBCQ01122581;XM_005413630;XM_005413631;XM_005413634 XP_005413687;XP_005413688;XP_005413691 MODEL 39134177 misc_rna 7SK 7SK RNA 8993516 pseudo LOC102012375 stathmin-2 pseudogene NW_004955568 690849 691813 + 102012375 AGCD01074525;XM_005413457 MODEL 8813480 pseudo LOC102010817 60S ribosomal protein L9 pseudogene NW_004955424 4777949 4778494 + 102010817 AGCD01024365 MODEL 8703566 pseudo LOC102006253 elongation factor 1-alpha 1-like NW_004955420 25364489 25376572 + 102006253 AGCD01021353;AGCD01021354 MODEL 10265553 ncrna LOC106149262 uncharacterized LOC106149262 NW_004955441 13765288 13767338 + 106149262 AGCD01037160;GBBH01138108;XR_001235317 MODEL 8803324 protein-coding Gabrb2 gamma-aminobutyric acid type A receptor subunit beta2 ENCODES a protein that exhibits chloride channel activity (ortholog); GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chloride transmembrane transport (ortholog); cochlea development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); anxiety disorder (ortholog); FOUND IN dendritic spine (ortholog); GABA receptor complex (ortholog); GABA-A receptor complex (ortholog) NW_004955408 15126235 15363169 - 102029591 AGCD01008410;AGCD01008411;AGCD01008412;AGCD01008413;AGCD01008414;AGCD01008415;GBDK01028456;XM_005376271;XM_005376272 XP_005376328;XP_005376329 MODEL 8998177 pseudo LOC102018046 eukaryotic translation initiation factor 5 pseudogene NW_004955596 640860 643263 + 102018046 AGCD01076525 MODEL 8725807 pseudo LOC102025172 vasculin pseudogene NW_004955540 1909030 1917626 + 102025172 AGCD01071308;XR_264822 MODEL 8912037 protein-coding Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955574 157769 164947 - 102018238 AGCD01075087;AGCD01075088;GBCC01043779;XM_005413802 XP_005413859 MODEL 39131701 rrna 5S_rRNA 5S ribosomal RNA 8971068 protein-coding Ptcd3 pentatricopeptide repeat domain 3 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955424 1480934 1507621 - 102020581 AGCD01024237;GBDI01127765;XM_005385406;XM_013514671;XM_013514672 XP_005385463;XP_013370125;XP_013370126 MODEL 39132518 snrna U6 U6 spliceosomal RNA 8871146 protein-coding Bid BH3 interacting domain death agonist ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); extrinsic apoptotic signaling pathway (ortholog); glial cell apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955454 5776656 5785500 - 102005665 AGCD01045187;AGCD01045188;GBCB01130016;GBDJ01272354;XM_013520182 XP_013375636 MODEL 9043453 protein-coding Wdr20 WD repeat domain 20 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Developmental Disabilities (ortholog); hydrocephalus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); peptidase complex (ortholog) NW_004955538 1520336 1590824 + 102026907 AGCD01071069;AGCD01071070;AGCD01071071;AGCD01071072;AGCD01071073;AGCD01071074;GBDF01083282;XM_005410738;XM_005410739;XM_005410740;XM_005410743;XM_005410746;XM_005410747;XM_005410748;XM_013507829;XM_013507830;XM_013507831 XP_005410795;XP_005410796;XP_005410797;XP_005410800;XP_005410803;XP_005410804;XP_005410805;XP_013363283;XP_013363284;XP_013363285 MODEL 8913986 protein-coding Ddx27 DEAD-box helicase 27 INVOLVED IN rRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955445 8881062 8899895 - 102006506 AGCD01039617;AGCD01039618;GBDJ01176930;XM_005392332 XP_005392389 MODEL 8818962 protein-coding Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN cartilage development (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); chondroitin sulfate proteoglycan metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955403 43178520 43347121 - 102021724 AGCD01002767;AGCD01002768;GBBH01036975;GBDJ01140032;XM_013513615 XP_013369069 MODEL 8861954 protein-coding Fignl1 fidgetin like 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex destabilizing activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA recombinase disassembly (ortholog); double-strand break repair involved in meiotic recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Kidney Neoplasms (ortholog); lung cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); DNA repair complex (ortholog) NW_004955456 3588190 3594559 + 102028497 AGCD01046276;AGCD01046277;GBBH01071493;XM_005396606;XM_005396607;XM_005396608;XM_013520641 XP_005396663;XP_005396664;XP_005396665;XP_013376095 MODEL 9024193 protein-coding Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 INVOLVED IN cellular response to interferon-beta (ortholog); cellular response to retinoic acid (ortholog); extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebral infarction (ortholog); Clark-Baraitser syndrome (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955524 2426604 2433682 - 102014483 AGCD01068817;AGCD01068818;GBDF01008366;XM_013507297;XM_013507298 XP_013362751;XP_013362752 MODEL 9011630 protein-coding Mis18bp1 MIS18 binding protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN CENP-A recruiting complex (ortholog); nucleus (ortholog) NW_004955409 16704414 16751469 + 102006220 AGCD01009737;AGCD01009738;GBDF01188546;XM_005376853;XM_005376854;XM_013510343 XP_005376910;XP_005376911;XP_013365797 MODEL 9004264 protein-coding Nudt4 nudix hydrolase 4 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); diphosphoinositol-polyphosphate diphosphatase activity (ortholog); snoRNA binding (ortholog); FOUND IN cytosol (ortholog) NW_004955405 30228072 30234683 + 102026389 AGCD01005268;GBCE01031719;XM_013518293;XM_013518296 XP_013373747;XP_013373750 MODEL 10234104 ncrna LOC106147110 uncharacterized LOC106147110 NW_004955520 2750271 2755313 - 106147110 AGCD01068082;XR_001231868 MODEL 9062901 protein-coding Muc3a mucin 3A, cell surface associated ASSOCIATED WITH cholangiocarcinoma (ortholog); pancreatic ductal carcinoma (ortholog) NW_004955573 45920 60091 - 102008475 AGCD01074958;AGCD01074959;GBDI01080219;XM_013509450 XP_013364904 MODEL 8814636 protein-coding LOC102021406 histone H2A INVOLVED IN mRNA processing (ortholog); nucleosome assembly (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); nucleosome (ortholog) NW_004955593 911641 911919 + 102021406 AGCD01076404;GBDF01010904;GBDJ01218416;XM_005414637 XP_005414694 MODEL 8751583 ncrna LOC102003099 uncharacterized LOC102003099 NW_004955462 10959270 10994353 - 102003099 AGCD01049379;AGCD01049380;GBDF01082820;XR_001236594;XR_263124;XR_263125;XR_263126 MODEL 9067327 protein-coding LOC102005211 mRNA cap guanine-N7 methyltransferase NW_004956021 841 8406 + 102005211 AGCD01078894;GBCC01050559;XM_013510215 XP_013365669 MODEL 8717156 protein-coding LOC102007397 uncharacterized LOC102007397 NW_004955403 53982569 53983635 + 102007397 AGCD01003083;GBDK01203485;XM_005373841 XP_005373898 MODEL 8797419 protein-coding LOC102004879 lysozyme C NW_004957064 526 1868 - 102004879 AGCD01080460;GBCE01006950;GBDK01017882;XM_005415221 XP_005415278 MODEL 39134488 misc_rna 7SK 7SK RNA 8934957 protein-coding LOC102024487 melanoma-associated antigen B5-like NW_004955509 6427045 6430028 + 102024487 AGCD01066122;GBDF01213466;XM_013506290 XP_013361744 MODEL 8868912 protein-coding Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN glycerol-3-phosphate metabolic process (ortholog); phosphatidic acid biosynthetic process (ortholog); piRNA processing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955470 3633076 3643635 - 102013921 AGCD01052705;GBDF01053520;XM_013522823 XP_013378277 MODEL 39132335 rrna 5S_rRNA 5S ribosomal RNA 8912743 ncrna LOC102007747 uncharacterized LOC102007747 NW_004955462 12097970 12113964 + 102007747 AGCD01049397;GBDF01234407;XR_263131 MODEL 39132520 snrna U6 U6 spliceosomal RNA 8993491 ncrna LOC102010017 uncharacterized LOC102010017 NW_004955451 14756261 14759461 - 102010017 AGCD01043570;GBDK01285033;XR_262608 MODEL 8756104 protein-coding Cyrib CYFIP related Rac1 interactor B ENCODES a protein that exhibits MHC class Ib protein binding, via antigen binding groove (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to molecule of bacterial origin (ortholog); negative regulation of actin filament polymerization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); diastolic heart failure (ortholog); FOUND IN cilium (ortholog); mitochondrion (ortholog) NW_004955461 4634324 4786723 - 102006550 AGCD01048870;AGCD01048871;AGCD01048872;AGCD01048873;AGCD01048874;AGCD01048875;GBDI01133387;XM_005397991;XM_005397992;XM_005397993;XM_013521325;XM_013521326 XP_005398048;XP_005398049;XP_005398050;XP_013376779;XP_013376780 MODEL 8906704 protein-coding Tro trophinin INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955475 2266522 2278016 + 102024454 AGCD01054800;GBDK01001381;XM_005401530;XM_013502848;XM_013502849;XM_013502850;XM_013502851;XM_013502852;XM_013502853 XP_005401587;XP_013358302;XP_013358303;XP_013358304;XP_013358305;XP_013358306;XP_013358307 MODEL 9056963 pseudo LOC102006254 rab11 family-interacting protein 5-like NW_004955421 18213737 18219501 - 102006254 AGCD01022039 MODEL 9014895 protein-coding Sestd1 SEC14 and spectrin domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN calcium channel complex (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955403 17761404 17835528 + 102023421 AGCD01002086;AGCD01002087;GBDK01231007;XM_005373365;XM_005373367;XM_013512590 XP_005373422;XP_005373424;XP_013368044 MODEL 8809753 protein-coding Glipr2 GLI pathogenesis related 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of epithelial cell migration (ortholog); positive regulation of epithelial to mesenchymal transition (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955472 191886 201551 - 102008400 AGCD01053321;GBCE01004076;GBCE01004077;XM_013523014 XP_013378468 MODEL 8883960 protein-coding LOC102013498 vomeronasal type-1 receptor 90-like NW_004955414 15078937 15087520 + 102013498 AGCD01015176;XM_005380444 XP_005380501 MODEL 8777958 protein-coding LOC102025174 chromosome unknown open reading frame, human C16orf95 ASSOCIATED WITH cervical cancer (ortholog); stomach cancer (ortholog); thymoma (ortholog) NW_004955541 1795301 1807870 - 102025174 AGCD01071388;GBDF01003427;XM_005410998;XM_005410999;XM_005411000 XP_005411055;XP_005411056;XP_005411057 MODEL 9026698 protein-coding Ipo7 importin 7 ENCODES a protein that exhibits histone binding (ortholog); SMAD binding (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of odontoblast differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955414 25131703 25195892 + 102028737 AGCD01015576;AGCD01015577;AGCD01015578;AGCD01015579;AGCD01015580;AGCD01015581;GBCE01098244;XM_005380260;XM_013511836 XP_005380317;XP_013367290 MODEL 8809489 protein-coding LOC102023459 taste receptor type 2 member 14-like NW_004955413 8021256 8022194 - 102023459 AGCD01013841;XM_005379627 XP_005379684 MODEL 9027874 pseudo LOC102022755 polycomb protein SUZ12 pseudogene NW_004955568 1527541 1533685 + 102022755 AGCD01074547 MODEL 8807441 protein-coding LOC102011983 cystatin-9-like NW_004955415 30490600 30492806 - 102011983 AGCD01016664;GBDF01134641;XM_013512168 XP_013367622 MODEL 8748836 ncrna LOC102008872 uncharacterized LOC102008872 NW_004955424 19963501 19969899 + 102008872 AGCD01024841;GBDI01147421;XR_001234129;XR_001234130;XR_001234131;XR_261086;XR_261087 MODEL 8987193 protein-coding Bag4 BAG cochaperone 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); negative regulation of mRNA modification (ortholog); PARTICIPATES IN ceramide signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); high grade glioma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955463 13788852 13824135 + 102021535 AGCD01049886;AGCD01049887;AGCD01049888;AGCD01049889;AGCD01049890;GBDF01161731;XM_005398437 XP_005398494 MODEL 8784937 pseudo LOC102003470 L-lactate dehydrogenase A chain pseudogene NW_004955505 1011597 1012538 + 102003470 AGCD01064964 MODEL 8795683 protein-coding Bik BCL2 interacting killer ENCODES a protein that exhibits BH domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); male gonad development (ortholog); positive regulation of protein-containing complex assembly (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); endomembrane system (ortholog); mitochondrial envelope (ortholog) NW_004955413 28277727 28294032 + 102015396 AGCD01014555;GBDK01226774;XM_005379433 XP_005379490 MODEL 39134178 misc_rna 7SK 7SK RNA 8943640 protein-coding Asb7 ankyrin repeat and SOCS box containing 7 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromosome organization (ortholog); cortical actin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); heterochromatin (ortholog) NW_004955416 27610011 27649186 + 102007337 AGCD01017618;GBDF01192819;XM_005381638 XP_005381695 MODEL 9041590 protein-coding LOC102005911 gamma-aminobutyric acid receptor subunit rho-2 NW_004955411 16026663 16070295 - 102005911 AGCD01011964;GBDK01413093;XM_005377748 XP_005377805 MODEL 9059308 pseudo LOC102012379 60S ribosomal protein L6-like NW_004955573 953680 960330 - 102012379 AGCD01075010 MODEL 8861185 protein-coding LOC102023109 cytochrome c1, heme protein, mitochondrial INVOLVED IN response to glucagon (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955454 2758935 2760569 + 102023109 AGCD01045033;GBCQ01008022;GBDF01045160;XM_013520268 XP_013375722 MODEL 8855346 protein-coding LOC102010819 lariat debranching enzyme NW_004955501 832433 846485 + 102010819 AGCD01064041;AGCD01064042;GBDF01305392;XM_005406750 XP_005406807 MODEL 8729703 protein-coding Fignl2 fidgetin like 2 INVOLVED IN microtubule severing (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell leading edge (ortholog) NW_004955547 2205614 2234417 - 102016852 AGCD01072261;AGCD01072262;AGCD01072263;AGCD01072264;GBDK01115749;XM_005411962 XP_005412019 MODEL 8939535 protein-coding Kif12 kinesin family member 12 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of fatty acid biosynthetic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cilium (ortholog); extracellular exosome (ortholog); microtubule organizing center (ortholog) NW_004955419 13463861 13470703 + 102014782 AGCD01020003;GBDK01006201;XM_005382645;XM_005382646;XM_005382647;XM_005382648;XM_005382649;XM_005382650;XM_005382652;XM_005382653;XM_005382654;XM_005382655;XM_013513275;XM_013513276;XM_013513278;XR_260626;XR_260627 XP_005382702;XP_005382703;XP_005382704;XP_005382705;XP_005382706;XP_005382707;XP_005382709;XP_005382710;XP_005382711;XP_005382712;XP_013368729;XP_013368730;XP_013368732 MODEL 10377638 ncrna LOC106149263 uncharacterized LOC106149263 NW_004955441 6842402 6844715 + 106149263 AGCD01036945;GBDF01118204;XR_001235320 MODEL 8939476 protein-coding Plcl1 phospholipase C like 1 (inactive) ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); regulation of synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955403 2643092 2904651 - 102011717 AGCD01001738;AGCD01001739;AGCD01001740;GBDI01356679;XM_005373259;XM_013511993;XM_013511996;XM_013512003;XM_013512012;XM_013512015;XM_013512018;XM_013512022 XP_005373316;XP_013367447;XP_013367450;XP_013367457;XP_013367466;XP_013367469;XP_013367472;XP_013367476 MODEL 10283854 protein-coding LOC106147111 uncharacterized LOC106147111 NW_004955520 2113587 2140566 + 106147111 AGCD01068076;XM_013507019 XP_013362473 MODEL 8835666 protein-coding CUNH12orf75 chromosome unknown C12orf75 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955405 39595762 39623671 + 102018154 AGCD01005502;GBDF01133707;XM_005374610;XM_013518997 XP_005374667;XP_013374451 MODEL 8729995 protein-coding Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); chloride channel activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN adult behavior (ortholog); brain development (ortholog); cellular response to histamine (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Angelman syndrome (ortholog); FOUND IN cell surface (ortholog); chloride channel complex (ortholog); cytoplasm (ortholog) NW_004955533 2879437 2938952 + 102026350 AGCD01070402;GBDF01307942;XM_005410413 XP_005410470 MODEL 8855649 protein-coding LOC102018049 vomeronasal type-2 receptor 116-like NW_004955622 20044 44768 - 102018049 AGCD01077381;XM_005415016 XP_005415073 MODEL 8769505 protein-coding Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ENCODES a protein that exhibits enzyme binding (ortholog); histone pre-mRNA DCP binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); protein methylation (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955455 8021946 8045325 + 102004141 AGCD01045870;GBDF01081549;XM_005396392 XP_005396449 MODEL 39131702 rrna 5S_rRNA 5S ribosomal RNA 10145238 protein-coding Fam240a family with sequence similarity 240 member A ASSOCIATED WITH cervical cancer (ortholog) NW_004955420 25461700 25468516 - 106148366 AGCD01021359;GBCB01077551;XM_013513493;XM_013513494 XP_013368947;XP_013368948 MODEL 8709564 protein-coding LOC102024488 olfactory receptor 1020-like NW_004955511 1747705 1751671 + 102024488 AGCD01066378;XM_005408242 XP_005408299 MODEL 8790057 protein-coding Wdr24 WD repeat domain 24 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of protein kinase activity (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN GATOR2 complex (ortholog); lysosomal membrane (ortholog) NW_004955442 16513074 16519296 + 102019336 AGCD01037901;GBDJ01084560;XM_005391617;XM_005391618 XP_005391674;XP_005391675 MODEL 9045826 protein-coding Hnf1a HNF1 homeobox A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); apoptotic nuclear changes (ortholog); bile acid and bile salt transport (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH adenoid squamous cell carcinoma (ortholog); cerebral infarction (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955455 10694102 10717613 - 102005773 AGCD01045961;GBCQ01097595;XM_005396490;XM_013520476 XP_005396547;XP_013375930 MODEL 8916579 pseudo LOC102007751 olfactory receptor 147-like NW_004955412 25290203 25291080 + 102007751 AGCD01013143 MODEL 39132521 snrna U6 U6 spliceosomal RNA 8943913 protein-coding Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955546 1261231 1296420 + 102005639 AGCD01072044;AGCD01072045;AGCD01072046;AGCD01072047;GBDF01124482;XM_005411763;XM_005411764;XM_013508394;XR_264888 XP_005411820;XP_005411821;XP_013363848 MODEL 8780777 protein-coding Ddx28 DEAD-box helicase 28 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955484 8609895 8612309 + 102010698 AGCD01058393;GBDF01192146;XM_005403587 XP_005403644 MODEL 8743323 protein-coding Ndufa2 NADH:ubiquinone oxidoreductase subunit A2 INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Disease Progression (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955418 52952 55060 + 102028415 AGCD01018665;GBDF01051335;XM_005382014 XP_005382071 MODEL 10204683 ncrna LOC106150053 uncharacterized LOC106150053 NW_004955462 4487429 4569813 + 106150053 AGCD01049228;AGCD01049229;AGCD01049230;AGCD01049231;AGCD01049232;AGCD01049233;XR_001236624 MODEL 9035181 protein-coding Nudt5 nudix hydrolase 5 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); 8-oxo-dGDP phosphatase activity (ortholog); ADP-ribose diphosphatase activity (ortholog); INVOLVED IN ATP generation from poly-ADP-D-ribose (ortholog); chromatin remodeling (ortholog); D-ribose catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955462 190872 211975 - 102006640 AGCD01049071;AGCD01049072;GBCQ01093148;XM_005398081;XM_013521371;XM_013521372 XP_005398138;XP_013376825;XP_013376826 MODEL 9047211 pseudo LOC102003102 HAUS augmin-like complex subunit 8 NW_004955464 11500987 11501958 - 102003102 AGCD01050155 MODEL 8716564 ncrna LOC102005912 uncharacterized LOC102005912 NW_004955412 3097642 3103353 - 102005912 AGCD01012565;GBDF01016512;XR_001232865;XR_001232866;XR_001232867 MODEL 8762701 protein-coding Ptch1 patched 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cyclin binding (ortholog); hedgehog family protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN apical part of cell (ortholog); axonal growth cone (ortholog); caveola (ortholog) NW_004955422 22362330 22418062 - 102005945 AGCD01023158;GBCE01185669;GBDF01209723;XM_013514312 XP_013369766 MODEL 9029465 ncrna LOC102010821 uncharacterized LOC102010821 NW_004955505 3545137 3556925 + 102010821 AGCD01065031;GBBH01131759;XR_264306 MODEL 8762401 ncrna LOC102023113 uncharacterized LOC102023113 NW_004955407 27659467 27670297 + 102023113 AGCD01007555;GBCQ01144581;XR_259591 MODEL 39131308 protein-coding NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit 8740452 pseudo LOC102013499 superoxide dismutase [Cu-Zn] pseudogene NW_004955472 2854745 2855177 + 102013499 AGCD01053492 MODEL 8956543 protein-coding Glis1 GLIS family zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of cell fate commitment (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955464 5495528 5680114 + 102010980 AGCD01050009;AGCD01050010;GBDF01040036;XM_005398558;XM_013521759 XP_005398615;XP_013377213 MODEL 8786018 protein-coding LOC102025178 uncharacterized LOC102025178 NW_004955546 1105712 1113339 + 102025178 AGCD01072041;GBDI01248776;XM_013508411;XM_013508412;XR_001232206 XP_013363865;XP_013363866 MODEL 8963260 protein-coding Gabrd gamma-aminobutyric acid type A receptor subunit delta ENCODES a protein that exhibits GABA-A receptor activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); autism spectrum disorder (ortholog); cocaine dependence (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); GABA-A receptor complex (ortholog) NW_004955486 9035330 9039553 - 102009508 AGCD01059160;GBCE01179629;GBDK01226676;XM_005404176 XP_005404233 MODEL 8716155 protein-coding LOC102010019 phospholipase A2, membrane associated-like NW_004955452 597005 599899 - 102010019 AGCD01043819;XM_005395284 XP_005395341 MODEL 8925148 pseudo LOC102021413 40S ribosomal protein S16 pseudogene NW_004955404 19244236 19244674 + 102021413 AGCD01003639 MODEL 8874783 protein-coding Miso1 mitochondrial inner membrane subdomain organizer 1 INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of mitochondrial fusion (ortholog); positive regulation of mitochondrial fission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955448 6836631 6849024 - 102015999 AGCD01041395;GBCQ01126601;GBDK01026122;XM_005393069 XP_005393126 MODEL 9018477 protein-coding Muc4 mucin 4, cell surface associated ENCODES a protein that exhibits ErbB-2 class receptor binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); digestive tract development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic conjunctivitis (ortholog); Bile Duct Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular region (ortholog); microvillus membrane (ortholog) NW_004955420 12228801 12274840 - 102003878 AGCD01020857;AGCD01020858;GBBH01062355;XM_013513367 XP_013368821 MODEL 8992992 protein-coding Cys1 cystin 1 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN inner ear development (ortholog); kidney development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); polycystic kidney disease (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955487 5455820 5461362 - 102027752 AGCD01059333;AGCD01059334;GBBH01180330;GBCQ01098223;XM_013504397 XP_013359851 MODEL 9001436 protein-coding LOC102005212 regulator of G-protein signaling 12-like NW_004957078 697 1275 - 102005212 AGCD01080474;GBCE01118568;GBCE01118569;XM_005415222 XP_005415279 MODEL 9050958 ncrna LOC102004883 uncharacterized LOC102004883 NW_004955404 21351961 21500830 + 102004883 AGCD01003725;AGCD01003726;AGCD01003727;GBDF01028560;XR_259320 MODEL 39134489 misc_rna 7SK 7SK RNA 9019314 pseudo LOC102006259 programmed cell death protein 5 pseudogene NW_004955502 7085665 7086085 - 102006259 AGCD01064429;XM_005406906 MODEL 8947897 protein-coding CUNH13orf46 chromosome unknown C13orf46 homolog NW_004955404 227635 237264 + 102026067 AGCD01003198;GBDF01006237;XM_005373922 XP_005373979 MODEL 10161148 protein-coding LOC106147112 collagen alpha-1(I) chain-like NW_004955520 2942846 2947790 - 106147112 AGCD01068087;GBBH01209943;XM_013507020 XP_013362474 MODEL 8856462 pseudo LOC102022758 40S ribosomal protein SA pseudogene NW_004955570 1323409 1325769 + 102022758 AGCD01074809 MODEL 8851158 protein-coding Gpat3 glycerol-3-phosphate acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN glycerol-3-phosphate metabolic process (ortholog); phospholipid biosynthetic process (ortholog); regulation of TOR signaling (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955474 6119516 6192784 - 102027519 AGCD01054448;AGCD01054449;AGCD01054450;AGCD01054451;AGCD01054452;AGCD01054453;AGCD01054454;AGCD01054455;AGCD01054456;AGCD01054457;AGCD01054458;GBCE01113199;XM_005401380 XP_005401437 MODEL 8896635 protein-coding LOC102018050 arylamine N-acetyltransferase 2-like NW_004955403 42312025 42335918 + 102018050 AGCD01002751;GBDK01432435;XM_005373604;XM_005373605;XM_005373606;XM_005373607;XM_013513595 XP_005373661;XP_005373662;XP_005373663;XP_005373664;XP_013369049 MODEL 8852330 ncrna LOC102004884 uncharacterized LOC102004884 NW_004955452 4504172 4505457 - 102004884 AGCD01043984;GBCQ01086582;XR_262651 MODEL 39131301 protein-coding FAM240B family with sequence similarity 240 member B 8858145 ncrna LOC102023460 uncharacterized LOC102023460 NW_004955414 18802615 18804119 - 102023460 AGCD01015287;GBDF01087275;XR_001233176;XR_001233177 MODEL 39131703 rrna 5S_rRNA 5S ribosomal RNA 8874336 ncrna LOC102003471 uncharacterized LOC102003471 NW_004955428 13113557 13178517 - 102003471 AGCD01027942;AGCD01027943;AGCD01027944;GBDI01311971;XR_001234449;XR_001234450;XR_261299 MODEL 9014495 protein-coding LOC102024494 chromosome unknown open reading frame, human C9orf153 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955432 1362227 1386118 + 102024494 AGCD01030592;GBDF01124972;XM_005387917;XM_005387918;XM_005387920;XM_013515949 XP_005387974;XP_005387975;XP_005387977;XP_013371403 MODEL 8711177 pseudo LOC102012383 zinc finger protein 132-like NW_004955584 1075427 1081804 - 102012383 AGCD01075978;XR_265112;XR_265113 MODEL 8820400 protein-coding Bag5 BAG cochaperone 5 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-folding chaperone binding (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN Golgi organization (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); dilated cardiomyopathy 2F (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); inclusion body (ortholog); junctional membrane complex (ortholog) NW_004955538 2412297 2416094 - 102011586 AGCD01071124;AGCD01071125;GBDI01065509;XM_005410783;XM_005410784;XM_005410785;XM_005410786 XP_005410840;XP_005410841;XP_005410842;XP_005410843 MODEL 8938719 ncrna LOC102007399 uncharacterized LOC102007399 NW_004955405 764142 804289 + 102007399 AGCD01004584;AGCD01004585;GBDF01014030;XR_259356;XR_259357 MODEL 8803864 protein-coding Asb8 ankyrin repeat and SOCS box containing 8 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955500 7021895 7051459 - 102026131 AGCD01063897;AGCD01063898;GBBH01218885;XM_005406639;XM_005406641;XM_005406643;XM_013505689;XM_013505690;XM_013505691;XM_013505692;XM_013505693;XM_013505694 XP_005406696;XP_005406698;XP_005406700;XP_013361143;XP_013361144;XP_013361145;XP_013361146;XP_013361147;XP_013361148 MODEL 8706043 protein-coding Ndufa3 NADH:ubiquinone oxidoreductase subunit A3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955604 139844 141578 - 102015682 AGCD01076865;GBCE01007106;XM_005414866 XP_005414923 MODEL 8838960 protein-coding Filip1 filamin A interacting protein 1 INVOLVED IN cerebral cortex development (ortholog); corpus callosum development (ortholog); modification of postsynaptic structure (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN actin cytoskeleton (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955502 3806016 3976013 - 102012981 AGCD01064322;AGCD01064323;GBBH01076633;GBCB01038385;XM_013505828;XM_013505829;XM_013505830 XP_013361282;XP_013361283;XP_013361284 MODEL 10149362 ncrna LOC106149264 uncharacterized LOC106149264 NW_004955441 19688441 19693338 + 106149264 AGCD01037361;AGCD01037362;GBDF01279746;XR_001235321 MODEL 10389251 ncrna LOC106150054 uncharacterized LOC106150054 NW_004955462 5847653 5852321 - 106150054 AGCD01049263;XR_001236625 MODEL 8940012 protein-coding LOC102003103 uncharacterized LOC102003103 NW_004955412 1132411 1136987 + 102003103 AGCD01012507;GBDF01116497;XM_005377954 XP_005378011 MODEL 39132337 rrna 5S_rRNA 5S ribosomal RNA 8775434 protein-coding Set SET nuclear proto-oncogene INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 58 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955570 1104447 1117682 + 102025059 AGCD01074788;AGCD01074789;AGCD01074790;GBCC01015512;GBDF01047525;XM_013509410 XP_013364864 MODEL 8927401 protein-coding Ipo8 importin 8 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955505 4490738 4574969 + 102013193 AGCD01065114;AGCD01065115;AGCD01065116;GBDF01126107;XM_005407134 XP_005407191 MODEL 8986111 protein-coding LOC102010825 olfactory receptor 4D6 NW_004955511 3967106 3968050 + 102010825 AGCD01066484;XM_005408062 XP_005408119 MODEL 9037750 protein-coding Snrpe small nuclear ribonucleoprotein polypeptide E ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955406 39725841 39732527 + 102016018 AGCD01006633;GBDJ01075700;XM_005375279 XP_005375336 MODEL 9045982 pseudo LOC102011985 mitochondrial import inner membrane translocase subunit Tim8 B pseudogene NW_004955416 17979253 17979575 - 102011985 AGCD01017393 MODEL 8887043 ncrna LOC102008873 uncharacterized LOC102008873 NW_004955427 6400197 6403763 + 102008873 AGCD01027028;GBDF01126299;XR_261236 MODEL 8819473 protein-coding Ptch2 patched 2 ENCODES a protein that exhibits hedgehog family protein binding (ortholog); hedgehog receptor activity (ortholog); smoothened binding (ortholog); INVOLVED IN cell fate determination (ortholog); epidermal cell fate specification (ortholog); epidermis development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955464 13387844 13403991 + 102009156 AGCD01050274;AGCD01050275;GBDJ01143446;XM_005398741;XM_013521618;XM_013521619;XM_013521620;XM_013521621;XM_013521622;XM_013521623;XM_013521624;XM_013521625 XP_005398798;XP_013377072;XP_013377073;XP_013377074;XP_013377075;XP_013377076;XP_013377077;XP_013377078;XP_013377079 MODEL 39134179 misc_rna 7SK 7SK RNA 8777516 protein-coding Bin1 bridging integrator 1 ENCODES a protein that exhibits actin filament binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); GTPase binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); enucleation (ortholog); lipid tube assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) NW_004955459 3376149 3423157 + 102006639 AGCD01048015;GBDI01010869;XM_005397618;XM_005397619;XM_005397620;XM_005397621;XM_005397622;XM_005397623;XM_005397624;XM_005397625;XM_005397626;XM_005397627;XM_005397628;XM_005397629;XM_005397630;XM_005397631;XM_005397632;XM_005397633;XM_005397634;XM_013521077 XP_005397675;XP_005397676;XP_005397677;XP_005397678;XP_005397679;XP_005397680;XP_005397681;XP_005397682;XP_005397683;XP_005397684;XP_005397685;XP_005397686;XP_005397687;XP_005397688;XP_005397689;XP_005397690;XP_005397691;XP_013376531 MODEL 8834993 ncrna LOC102025180 uncharacterized LOC102025180 NW_004955441 15926164 15928611 + 102025180 AGCD01037262;GBDF01043836;XR_262089;XR_262090 MODEL 8795440 protein-coding LOC102007756 two pore calcium channel protein 2-like NW_004955470 3199435 3237984 - 102007756 AGCD01052693;GBDK01185352;XM_005400630;XM_005400631;XM_005400632;XM_013522828;XM_013522829 XP_005400687;XP_005400688;XP_005400689;XP_013378282;XP_013378283 MODEL 8836874 protein-coding Heca HECA ribonucleoprotein granule regulator ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN negative regulation of mitotic cell cycle (ortholog); stress granule assembly (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleus (ortholog) NW_004955436 20523215 20569403 - 102013208 AGCD01034026;AGCD01034027;AGCD01034028;GBBH01005714;GBDF01049842;XM_013516653 XP_013372107 MODEL 8791092 ncrna LOC102010020 uncharacterized LOC102010020 NW_004955453 14159202 14163339 + 102010020 AGCD01044858;GBDF01249804;XR_001236190;XR_262732 MODEL 8810677 protein-coding Kif13a kinesin family member 13A ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); Golgi to plasma membrane protein transport (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); apraxia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); endosome membrane (ortholog); midbody (ortholog) NW_004955483 8191514 8366645 + 102019504 AGCD01057831;AGCD01057832;AGCD01057833;GBCQ01102016;XM_005403395;XM_013503818;XM_013503819 XP_005403452;XP_013359272;XP_013359273 MODEL 8795773 protein-coding Hnf1b HNF1 homeobox B ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branching morphogenesis of an epithelial tube (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH anemia (ortholog); cholangiocarcinoma (ortholog); chronic kidney disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955451 320283 371420 + 102019127 AGCD01042932;GBDJ01130120;XM_005393907;XM_005393908;XM_005393909;XM_005393910 XP_005393964;XP_005393965;XP_005393966;XP_005393967 MODEL 8909623 protein-coding Nudt6 nudix hydrolase 6 ENCODES a protein that exhibits FAD diphosphatase activity (ortholog); NADH pyrophosphatase activity (ortholog); INVOLVED IN negative regulation of cell cycle (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955428 17823994 17840380 + 102011342 AGCD01028052;GBCQ01101119;XM_005386758;XM_005386759;XM_005386760;XM_005386761 XP_005386815;XP_005386816;XP_005386817;XP_005386818 MODEL 9022593 protein-coding Plcl2 phospholipase C like 2 ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN B cell proliferation involved in immune response (ortholog); B-1a B cell differentiation (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955430 9157074 9347366 + 102028997 AGCD01029407;AGCD01029408;AGCD01029409;GBCE01152675;GBDJ01186898;XM_005387455 XP_005387512 MODEL 9014468 protein-coding LOC102023462 chromosome unknown open reading frame, human C11orf16 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955414 24675240 24685494 - 102023462 AGCD01015552;AGCD01015553;GBBH01060385;XM_005380242;XM_005380243;XM_013512042;XM_013512043;XM_013512044 XP_005380299;XP_005380300;XP_013367496;XP_013367497;XP_013367498 MODEL 8793705 protein-coding Muc5ac mucin 5AC, oligomeric mucus/gel-forming INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to glucocorticoid stimulus (ortholog); cellular response to retinoic acid (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); angle-closure glaucoma (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); mucus layer (ortholog) NW_004955476 11061405 11084294 - 102005136 AGCD01055436;AGCD01055437;AGCD01055438;GBBH01061289;XM_013502967 XP_013358421 MODEL 39134490 misc_rna 7SK 7SK RNA 8726228 ncrna LOC102013501 uncharacterized LOC102013501 NW_004955473 5281173 5291335 + 102013501 AGCD01053974;GBDI01312184;XR_001237117;XR_263581 MODEL 8727781 protein-coding Naa20 N-alpha-acetyltransferase 20, NatB catalytic subunit INVOLVED IN N-terminal peptidyl-aspartic acid acetylation (ortholog); N-terminal peptidyl-glutamic acid acetylation (ortholog); N-terminal peptidyl-glutamine acetylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 73 (ortholog); Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatB complex (ortholog) NW_004955415 28141872 28156096 + 102020661 AGCD01016637;AGCD01016638;GBCE01052887;XM_005380942;XM_005380944 XP_005380999;XP_005381001 MODEL 39132339 snrna U6 U6 spliceosomal RNA 8901025 protein-coding Ddx31 DEAD-box helicase 31 INVOLVED IN ribosome biogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955513 1970386 2036572 - 102022842 AGCD01066867;GBDF01157939;GBDK01357545;XM_005408640 XP_005408697 MODEL 8804296 protein-coding Troap trophinin associated protein ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955500 8129031 8137235 + 102016493 AGCD01063981;GBDF01084874;XM_005406696;XM_005406697;XM_005406698;XM_005406699 XP_005406753;XP_005406754;XP_005406755;XP_005406756 MODEL 8820864 protein-coding LOC102003475 olfactory receptor 5D18-like NW_004955511 551616 552566 - 102003475 AGCD01066333;XM_005408199 XP_005408256 MODEL 8905031 protein-coding Gabre gamma-aminobutyric acid type A receptor subunit epsilon ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN gamma-aminobutyric acid signaling pathway (ortholog); negative regulation of chloride transport (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Dwarfism (ortholog); epilepsy (ortholog); FOUND IN GABA-A receptor complex (ortholog); GABA-ergic synapse (ortholog); postsynaptic membrane (ortholog) NW_004955498 7470881 7488902 - 102009734 AGCD01063149;GBDK01229546;XM_005406446 XP_005406503 MODEL 8851640 ncrna LOC102012385 uncharacterized LOC102012385 NW_004955592 538916 543806 - 102012385 AGCD01076317;GBDI01163562;XR_265140 MODEL 8826122 protein-coding Misp mitotic spindle positioning ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell migration (ortholog); cortical actin cytoskeleton organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin filament (ortholog); cortical actin cytoskeleton (ortholog); focal adhesion (ortholog) NW_004955495 7034664 7044886 - 102021255 AGCD01062114;AGCD01062115;GBCE01151437;XM_013505341;XM_013505342;XM_013505343;XM_013505344 XP_013360795;XP_013360796;XP_013360797;XP_013360798 MODEL 8931447 protein-coding LOC102005213 homeobox protein Hox-B6 NW_004955403 20538174 20539079 - 102005213 AGCD01002162;GBCQ01033155;GBDI01385068;XM_013512796 XP_013368250 MODEL 8869109 protein-coding LOC102023118 olfactory receptor 6C2-like NW_004955458 2974880 2975827 + 102023118 AGCD01047263;XM_005397505 XP_005397562 MODEL 8786155 protein-coding LOC102006262 60S acidic ribosomal protein P1-like NW_004955506 3889447 3890523 - 102006262 AGCD01065321;XM_005407374;XM_005407375 XP_005407431;XP_005407432 MODEL 8803216 protein-coding Plcxd1 phosphatidylinositol specific phospholipase C X domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955499 574421 585386 + 102023053 AGCD01063242;AGCD01063243;AGCD01063244;GBDK01020725;GBDK01033039;XM_013505584;XM_013505585;XM_013505586;XM_013505587;XM_013505588 XP_013361038;XP_013361039;XP_013361040;XP_013361041;XP_013361042 MODEL 39132342 rrna 5S_rRNA 5S ribosomal RNA 8897338 protein-coding Wdr25 WD repeat domain 25 ASSOCIATED WITH Breast Cancer, Familial (ortholog); long QT syndrome (ortholog); lung cancer (ortholog) NW_004955438 21445502 21570271 + 102018335 AGCD01035544;AGCD01035545;AGCD01035546;AGCD01035547;GBBH01071352;GBDF01122161;XM_005390456 XP_005390513 MODEL 8943106 protein-coding CUNH14orf119 chromosome unknown C14orf119 homolog ASSOCIATED WITH COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 37203604 37206853 - 102024654 AGCD01010498;GBBH01035248;XM_005377092;XM_013510446 XP_005377149;XP_013365900 MODEL 8956041 protein-coding LOC102022759 chondroitin sulfate proteoglycan 4-like NW_004955446 12743297 12808985 + 102022759 AGCD01040243;GBCB01075890;XM_005392714 XP_005392771 MODEL 10369619 protein-coding LOC106147113 translation initiation factor IF-2-like NW_004955520 1428491 1429500 - 106147113 AGCD01068053;AGCD01068054;GBDF01045008;XM_013507022 XP_013362476 MODEL 8885611 protein-coding LOC102010827 olfactory receptor 10V1 NW_004955511 4140948 4141914 - 102010827 AGCD01066493;XM_005408271 XP_005408328 MODEL 8796345 protein-coding LOC102018052 uncharacterized LOC102018052 NW_004955451 16436871 16438274 - 102018052 AGCD01043676;XM_013519142 XP_013374596 MODEL 9041949 protein-coding Ipo9 importin 9 ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); nuclear import signal receptor activity (ortholog); INVOLVED IN proteasome localization (ortholog); protein import into nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955406 37898415 37946991 + 102018890 AGCD01006580;GBDF01003416;XM_005375192;XM_005375193 XP_005375249;XP_005375250 MODEL 8890908 protein-coding LOC102024496 zinc finger protein 709-like NW_004955432 4600161 4605984 + 102024496 AGCD01030730;AGCD01030731;GBDF01262659;XM_013515925 XP_013371379 MODEL 8868165 ncrna LOC102021414 uncharacterized LOC102021414 NW_004955405 9213975 9218444 + 102021414 AGCD01004765;GBCB01021521;XR_259365 MODEL 8962572 protein-coding Snrpf small nuclear ribonucleoprotein polypeptide F ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); RNA splicing (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); nasopharynx carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955405 32236876 32242716 + 102007186 AGCD01005331;GBDJ01079208;XM_005374489 XP_005374546 MODEL 8730448 pseudo LOC102025184 vacuolar protein sorting-associated protein 45 pseudogene NW_004955443 208496 220334 + 102025184 AGCD01038092;AGCD01038093;AGCD01038094 MODEL 8768272 ncrna LOC102005913 uncharacterized LOC102005913 NW_004955465 7025399 7028146 - 102005913 AGCD01050450;GBCQ01175139;XR_001236763;XR_263247 MODEL 8904096 protein-coding CUNH14orf39 chromosome unknown C14orf39 homolog INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic cell cycle (ortholog); meiotic DNA double-strand break processing involved in reciprocal meiotic recombination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN central element (ortholog); chromosome (ortholog) NW_004955466 9158022 9194088 + 102017318 AGCD01051030;GBDF01251571;XM_013521883 XP_013377337 MODEL 8899036 pseudo LOC102007401 zinc finger MYM-type protein 5-like NW_004955452 14055063 14061537 + 102007401 AGCD01044449 MODEL 8841428 ncrna LOC102010025 uncharacterized LOC102010025 NW_004955407 17318652 17322814 + 102010025 AGCD01007247;GBDF01021440;XR_259568 MODEL 9026141 protein-coding Csk C-terminal Src kinase ENCODES a protein that exhibits identical protein binding (ortholog); proline-rich region binding (ortholog); protein kinase A catalytic subunit binding (ortholog); INVOLVED IN adherens junction organization (ortholog); cellular response to peptide hormone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 3127561 3144550 - 102010008 AGCD01042422;GBDI01060122;GBDK01080247;XM_005393543 XP_005393600 MODEL 10338047 pseudo LOC106150055 septin-2 pseudogene NW_004955463 230221 230867 - 106150055 AGCD01049478 MODEL 9003906 protein-coding Muc5b mucin 5B, oligomeric mucus/gel-forming INVOLVED IN defense response to bacterium (ortholog); negative regulation of single-species biofilm formation in or on host organism (ortholog); regulation of macrophage activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); antisynthetase syndrome (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog) NW_004955476 11021665 11049239 - 102010692 AGCD01055435;AGCD01055436;GBDF01209000;XM_013502904 XP_013358358 MODEL 8985272 protein-coding LOC102003104 uncharacterized LOC102003104 NW_004955412 13999049 14010479 - 102003104 AGCD01012849;AGCD01012850;GBCB01025463;XM_013510960;XM_013510961;XM_013510962;XM_013510963;XM_013510964;XM_013510965;XM_013510966;XR_001232853;XR_001232854 XP_013366414;XP_013366415;XP_013366416;XP_013366417;XP_013366418;XP_013366419;XP_013366420 MODEL 8713571 protein-coding Filip1l filamin A interacting protein 1 like INVOLVED IN connective tissue replacement involved in inflammatory response wound healing (ortholog); fatty acid metabolic process (ortholog); gene expression (ortholog); FOUND IN centrosome (ortholog) NW_004955427 1386163 1641985 - 102019187 AGCD01026873;AGCD01026874;AGCD01026875;AGCD01026876;AGCD01026877;AGCD01026878;AGCD01026879;GBDK01232581;XM_005386289;XM_013515090 XP_005386346;XP_013370544 MODEL 9016846 protein-coding LOC102023464 olfactory receptor 51F2-like NW_004955414 20334900 20338787 - 102023464 AGCD01015368;XM_013511718 XP_013367172 MODEL 8762000 ncrna LOC102004885 uncharacterized LOC102004885 NW_004955405 196814 198433 + 102004885 AGCD01004554;GBDF01017517;XR_259350 MODEL 8971973 protein-coding Fam241a family with sequence similarity 241 member A ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955457 14550478 14553757 - 102021523 AGCD01047075;GBCQ01099058;XM_005397105 XP_005397162 MODEL 8773985 protein-coding Gpat4 glycerol-3-phosphate acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); diacylglycerol metabolic process (ortholog); fatty acid metabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955536 1266920 1313765 - 102013539 AGCD01070752;AGCD01070753;AGCD01070754;AGCD01070755;GBDF01008951;XM_005410526;XM_005410527 XP_005410583;XP_005410584 MODEL 39131704 rrna 5S_rRNA 5S ribosomal RNA 8818003 pseudo LOC102011989 F-actin-capping protein subunit alpha-1 pseudogene NW_004955481 9008939 9010077 - 102011989 AGCD01057092 MODEL 8841427 pseudo LOC102008875 phosducin-like protein 3 pseudogene NW_004955427 21601337 21602111 + 102008875 AGCD01027451 MODEL 8931245 protein-coding Bin2 bridging integrator 2 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); phagocytosis, engulfment (ortholog); plasma membrane tubulation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); phagocytic cup (ortholog); plasma membrane (ortholog) NW_004955547 1774330 1798031 - 102016523 AGCD01072246;GBDF01006942;GBDK01146360;XM_013508468 XP_013363922 MODEL 8850637 pseudo LOC102007759 rho-related GTP-binding protein RhoG-like NW_004955475 10913053 10914439 + 102007759 AGCD01055126 MODEL 8711184 protein-coding Hectd1 HECT domain E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN aorta development (ortholog); embryonic placenta development (ortholog); heart valve development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955409 29373572 29470623 + 102012510 AGCD01010267;GBDJ01141199;XM_005376961 XP_005377018 MODEL 8882055 protein-coding Ndufa5 NADH:ubiquinone oxidoreductase subunit A5 INVOLVED IN respiratory electron transport chain (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Facial Nerve Injuries (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955479 5065948 5080215 - 102013081 AGCD01056340;GBCB01006579;XM_005402326;XM_013503295 XP_005402383;XP_013358749 MODEL 8915033 protein-coding Asb9 ankyrin repeat and SOCS box containing 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); mitochondrion (ortholog) NW_004955519 2902802 2941358 + 102018964 AGCD01067945;AGCD01067946;GBDF01281643;XM_005409176;XM_005409177;XM_013506982 XP_005409233;XP_005409234;XP_013362436 MODEL 9009202 protein-coding Nudt7 nudix hydrolase 7 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); coenzyme A diphosphatase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN acetyl-CoA catabolic process (ortholog); brown fat cell differentiation (ortholog); butyryl-CoA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN peroxisome (ortholog) NW_004955522 945186 960094 + 102024269 AGCD01068354;AGCD01068355;GBDF01254056;XM_013507111 XP_013362565 MODEL 8855500 protein-coding Bag6 BAG cochaperone 6 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); misfolded protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); brain development (ortholog); endoplasmic reticulum stress-induced pre-emptive quality control (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN BAT3 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 176848 188243 - 102015444 AGCD01034108;GBCE01031762;XM_005389335;XM_005389336;XM_005389339;XM_005389340;XM_005389341;XM_005389343;XM_005389345;XM_013516841;XM_013516842;XM_013516843;XM_013516844;XM_013516845 XP_005389392;XP_005389393;XP_005389396;XP_005389397;XP_005389398;XP_005389400;XP_005389402;XP_013372295;XP_013372296;XP_013372297;XP_013372298;XP_013372299 MODEL 8790371 protein-coding Gabrg1 gamma-aminobutyric acid type A receptor subunit gamma1 ENCODES a protein that exhibits GABA receptor binding (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955443 2276592 2353312 + 102004208 AGCD01038162;XM_005391906 XP_005391963 MODEL 8905949 protein-coding Misp3 MISP family member 3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955415 32777456 32780734 + 102016471 AGCD01016732;AGCD01016733;GBBH01064686;GBCE01154128;XM_013512097 XP_013367551 MODEL 10109520 protein-coding LOC106149265 transcription initiation factor TFIID subunit 4-like NW_004955441 20013715 20014035 + 106149265 AGCD01037390;GBBH01032371;GBDJ01117255;XM_013517594 XP_013373048 MODEL 8836320 protein-coding Glis2 GLIS family zinc finger 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation involved in kidney development (ortholog); hematopoietic stem cell homeostasis (ortholog); kidney development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); nuclear speck (ortholog) NW_004955442 13097636 13113514 - 102013557 AGCD01037757;GBCE01114754;XM_005391303;XM_013517807 XP_005391360;XP_013373261 MODEL 39134491 misc_rna 7SK 7SK RNA 8907434 protein-coding Setbp1 SET binding protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); astigmatism (ortholog); FOUND IN nuclear body (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955402 30380346 30738869 + 102026697 AGCD01000770;AGCD01000771;AGCD01000772;AGCD01000773;AGCD01000774;AGCD01000775;AGCD01000776;AGCD01000777;AGCD01000778;GBCE01116826;XM_005373166 XP_005373223 MODEL 8893791 protein-coding LOC102013509 uncharacterized LOC102013509 NW_004955485 6368092 6370491 + 102013509 AGCD01058616;XM_005403920 XP_005403977 MODEL 8880585 pseudo LOC102010026 transmembrane protein 50A pseudogene NW_004955455 8395596 8396361 - 102010026 AGCD01045888 MODEL 10134918 ncrna LOC106150056 uncharacterized LOC106150056 NW_004955406 21861759 21862914 - 106150056 AGCD01006148;GBDJ01302264;XR_001236628 MODEL 9065673 protein-coding Ptchd1 patched domain containing 1 INVOLVED IN cognition (ortholog); excitatory chemical synaptic transmission (ortholog); inhibitory chemical synaptic transmission (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); plasma membrane (ortholog); synapse (ortholog) NW_004955509 3716086 3767541 + 102013108 AGCD01066032;AGCD01066033;GBCE01090342;XM_005407829 XP_005407886 MODEL 8872427 protein-coding Cysltr1 cysteinyl leukotriene receptor 1 ENCODES a protein that exhibits leukotriene receptor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH acute asthma (ortholog); Acute Lung Injury (ortholog); allergic asthma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955557 1667518 1702272 - 102022430 AGCD01073303;AGCD01073304;AY462138;GBCE01034656;XM_005412634;XM_005412635 AAR26537;XP_005412691;XP_005412692 MODEL 8752243 protein-coding Naa25 N-alpha-acetyltransferase 25, NatB auxiliary subunit ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatB complex (ortholog) NW_004955482 8583802 8659626 - 102007227 AGCD01057538;AGCD01057539;AGCD01057540;AGCD01057541;AGCD01057542;AGCD01057543;GBDK01398590;XM_005403187 XP_005403244 MODEL 39134180 misc_rna 7SK 7SK RNA 39132340 snrna U6 U6 spliceosomal RNA 9041710 ncrna LOC102010830 uncharacterized LOC102010830 NW_004955513 2631451 2640898 - 102010830 AGCD01066883;GBDF01209406;XR_264458 MODEL 8772336 pseudo LOC102018054 60S ribosomal protein L38 pseudogene NW_004955405 18308689 18309581 + 102018054 AGCD01005015 MODEL 8866370 pseudo LOC102012388 serine/threonine-protein kinase VRK1-like NW_004955402 55411512 55414352 + 102012388 AGCD01001435 MODEL 8730818 protein-coding LOC102011991 olfactory receptor 5V1-like NW_004955418 30227847 30228797 + 102011991 AGCD01019507;XM_005382370 XP_005382427 MODEL 8862413 protein-coding Ddx39a DExD-box helicase 39A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of innate immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955415 33021976 33030479 - 102015629 AGCD01016746;GBCE01054769;XM_005381099;XM_005381100;XM_005381101 XP_005381156;XP_005381157;XP_005381158 MODEL 9053819 protein-coding Trpa1 transient receptor potential cation channel subfamily A member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); plasma membrane (ortholog) NW_004955444 7876284 7922010 + 102027018 AGCD01038922;GBCQ01156908;XM_005392098 XP_005392155 MODEL 8897372 protein-coding Hnf4a hepatocyte nuclear factor 4 alpha ENCODES a protein that exhibits arachidonate binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); blood coagulation (ortholog); cell differentiation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 12925248 12962501 - 102018996 AGCD01039765;GBCQ01008109;XM_005392474;XM_005392475;XM_005392477;XM_005392478;XM_005392479 XP_005392531;XP_005392532;XP_005392534;XP_005392535;XP_005392536 MODEL 8753097 protein-coding Kif13b kinesin family member 13B ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of axonogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 51378928 51536509 - 102018458 AGCD01002989;AGCD01002990;AGCD01002991;AGCD01002992;AGCD01002993;GBBH01164816;GBDF01087741;XM_013514371 XP_013369825 MODEL 8999377 protein-coding Snrpg small nuclear ribonucleoprotein polypeptide G ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955424 14844318 14851720 + 102006149 AGCD01024660;GBCE01100469;XM_005385616 XP_005385673 MODEL 8710200 protein-coding LOC102025187 zinc finger protein 709-like NW_004955569 27899 63427 + 102025187 AGCD01074557;AGCD01074558;GBCE01006195;XM_005413488 XP_005413545 MODEL 9002952 pseudo LOC102007410 non-histone chromosomal protein HMG-14 pseudogene NW_004955459 7208563 7208865 + 102007410 AGCD01048098 MODEL 8821945 protein-coding Cskmt citrate synthase lysine methyltransferase ENCODES a protein that exhibits lysine N-methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine dimethylation (ortholog); peptidyl-lysine monomethylation (ortholog); peptidyl-lysine trimethylation (ortholog); FOUND IN mitochondrion (ortholog) NW_004955599 545490 546972 - 102013989 AGCD01076658;GBCE01109441;XM_005414785 XP_005414842 MODEL 8927694 protein-coding Plcxd2 phosphatidylinositol specific phospholipase C X domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955427 12094403 12143557 + 102021373 AGCD01027203;AGCD01027204;GBDF01277030;XM_005386368;XM_005386369;XM_013515219 XP_005386425;XP_005386426;XP_013370673 MODEL 8937175 ncrna LOC102022761 uncharacterized LOC102022761 NW_004955583 919179 927348 + 102022761 AGCD01075874;GBDJ01423788;XR_265101 MODEL 8811037 pseudo LOC102004887 alpha-endosulfine pseudogene NW_004955405 31961051 31962768 - 102004887 AGCD01005322 MODEL 8914520 ncrna LOC102003476 uncharacterized LOC102003476 NW_004955431 22858925 22862195 + 102003476 AGCD01030524;GBDJ01402645;XR_261494 MODEL 39131705 rrna 5S_rRNA 5S ribosomal RNA 9059601 pseudo LOC102024497 translocation protein SEC62 pseudogene NW_004955518 4379872 4381320 + 102024497 AGCD01067828 MODEL 8790397 pseudo LOC102005914 shugoshin-like 1 pseudogene NW_004955465 13332971 13334196 - 102005914 AGCD01050600 MODEL 8717128 ncrna LOC102005214 uncharacterized LOC102005214 NW_004955451 1877295 1878130 - 102005214 AGCD01042992;GBDF01085621;XR_001235999 MODEL 9064278 pseudo LOC102006264 nucleophosmin pseudogene NW_004955511 3225794 3227751 + 102006264 AGCD01066450 MODEL 8779020 protein-coding Ndufa6 NADH:ubiquinone oxidoreductase subunit A6 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955413 27485678 27491757 - 102004371 AGCD01014509;GBCQ01011147;XM_005379396 XP_005379453 MODEL 39132346 rrna 5S_rRNA 5S ribosomal RNA 8761180 protein-coding Wdr26 WD repeat domain 26 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); craniosynostosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955520 950505 983963 + 102006813 AGCD01068039;GBBH01167150;GBDF01044046;XM_005409219;XM_013507050 XP_005409276;XP_013362504 MODEL 8925446 ncrna LOC102007414 uncharacterized LOC102007414 NW_004955410 36159193 36161406 - 102007414 AGCD01011421;GBDF01176606;XR_259905 MODEL 8985981 protein-coding Ascc1 activating signal cointegrator 1 complex subunit 1 INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); Breast Cancer, Familial (ortholog); centronuclear myopathy (ortholog); FOUND IN DNA repair complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955437 19381279 19487057 + 102030123 AGCD01034847;AGCD01034848;AGCD01034849;AGCD01034850;AGCD01034851;AGCD01034852;AGCD01034853;AGCD01034854;AGCD01034855;GBDF01002453;XM_005390016;XM_013516956;XM_013516958 XP_005390073;XP_013372410;XP_013372412 MODEL 8941091 ncrna LOC102023474 uncharacterized LOC102023474 NW_004955419 3480398 3524480 - 102023474 AGCD01019725;AGCD01019726;GBDK01002749;XR_001233578 MODEL 8867716 protein-coding Gpatch1 G-patch domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog) NW_004955574 569204 609323 + 102027361 AGCD01075111;AGCD01075112;GBDF01225031;XM_005413834;XM_013509577 XP_005413891;XP_013365031 MODEL 8875015 ncrna LOC102021415 uncharacterized LOC102021415 NW_004955405 29322874 29335910 + 102021415 AGCD01005251;GBDF01017084;XR_259408 MODEL 39134181 misc_rna 7SK 7SK RNA 8723011 pseudo LOC102022763 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955449 3598267 3600715 - 102022763 AGCD01041856 MODEL 8731531 protein-coding Bin3 bridging integrator 3 INVOLVED IN intracellular protein localization (ortholog); myoblast migration involved in skeletal muscle regeneration (ortholog); regulation of lamellipodium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955403 46042885 46085029 - 102013997 AGCD01002849;GBDF01085029;XM_005373686 XP_005373743 MODEL 8916772 pseudo LOC102018056 deoxycytidine kinase pseudogene NW_004955452 6316449 6326634 - 102018056 AGCD01044102;AGCD01044103;AGCD01044104;AGCD01044105 MODEL 8986621 protein-coding CUNH14orf93 chromosome unknown C14orf93 homolog INVOLVED IN cell differentiation (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955409 37290615 37315297 + 102026405 AGCD01010506;AGCD01010507;GBDI01355317;XM_005377097;XM_005377098 XP_005377154;XP_005377155 MODEL 8886345 pseudo LOC102007760 uncharacterized LOC102007760 NW_004955476 4007426 4119894 - 102007760 AGCD01055264;AGCD01055265;AGCD01055266 MODEL 39131706 rrna 5S_rRNA 5S ribosomal RNA 8811354 protein-coding Hectd2 HECT domain E3 ubiquitin protein ligase 2 NW_004955425 1720634 1771681 - 102015329 AGCD01025238;GBDF01159582;XM_005386086 XP_005386143 MODEL 8909585 protein-coding Muc6 mucin 6, oligomeric mucus/gel-forming ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955476 11165423 11184674 + 102011309 AGCD01055442;AGCD01055443;GBDJ01366191;XM_013502906 XP_013358360 MODEL 8864885 ncrna LOC102011996 uncharacterized LOC102011996 NW_004955421 24720574 24725193 + 102011996 AGCD01022221;GBDI01347519;XR_260825 MODEL 8919922 protein-coding Glis3 GLIS family zinc finger 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); aniridia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog) NW_004955434 8140965 8581889 - 102021589 AGCD01032253;AGCD01032254;AGCD01032255;AGCD01032256;AGCD01032257;AGCD01032258;AGCD01032259;AGCD01032260;AGCD01032261;GBCQ01067018;XM_005388624;XM_005388625;XM_005388628;XM_005388631;XM_005388632;XM_005388633;XM_005388635;XM_013516323;XM_013516324;XM_013516325;XM_013516326;XM_013516327 XP_005388681;XP_005388682;XP_005388685;XP_005388688;XP_005388689;XP_005388690;XP_005388692;XP_013371777;XP_013371778;XP_013371779;XP_013371780;XP_013371781 MODEL 9024258 protein-coding Hnf4g hepatocyte nuclear factor 4 gamma ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gene expression (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955444 5081013 5157988 - 102017172 AGCD01038824;GBCQ01099697;XM_005392070;XM_005392071 XP_005392127;XP_005392128 MODEL 8799639 protein-coding LOC102003108 H/ACA ribonucleoprotein complex subunit 1-like NW_004955413 7012350 7019221 - 102003108 AGCD01013789;GBDI01034364;XM_005378922;XM_005378923 XP_005378979;XP_005378980 MODEL 8760404 protein-coding Kif14 kinesin family member 14 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); microtubule binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cell division (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955406 36732135 36791756 - 102004891 AGCD01006564;AGCD01006565;GBDI01362265;XM_013522030;XM_013522031;XM_013522033;XM_013522036;XM_013522039;XM_013522042;XR_001236838 XP_013377484;XP_013377485;XP_013377487;XP_013377490;XP_013377493;XP_013377496 MODEL 8732158 protein-coding Nudt8 nudix hydrolase 8 ENCODES a protein that exhibits coenzyme A diphosphatase activity (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN acetyl-CoA catabolic process (ortholog); butyryl-CoA catabolic process (ortholog); coenzyme A catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955422 17867395 17876272 + 102010593 AGCD01022932;GBCQ01062739;XM_005384299;XM_005384301;XM_013514282 XP_005384356;XP_005384358;XP_013369736 MODEL 8993938 protein-coding Bahcc1 BAH domain and coiled-coil containing 1 INVOLVED IN chromatin organization (ortholog); locomotory behavior (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955506 1578943 1639048 - 102005822 AGCD01065272;GBDJ01348288;XM_005407278;XM_013506090;XM_013506091;XM_013506092;XM_013506093;XM_013506094;XM_013506095 XP_005407335;XP_013361544;XP_013361545;XP_013361546;XP_013361547;XP_013361548;XP_013361549 MODEL 8794461 protein-coding Fimp1 fertilization-influencing membrane protein 1 INVOLVED IN fertilization (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog) NW_004955493 6940226 6941290 - 102025918 AGCD01061149;GBDF01193215;XM_005405200 XP_005405257 MODEL 10336445 ncrna LOC106149266 uncharacterized LOC106149266 NW_004955441 19826125 19843413 + 106149266 AGCD01037380;GBCQ01063052;XR_001235322 MODEL 8850483 protein-coding Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma2 ENCODES a protein that exhibits chloride channel activity (ortholog); GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN adult behavior (ortholog); cellular response to histamine (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); chloride channel complex (ortholog) NW_004955408 15766161 15857121 + 102003517 AGCD01008427;AGCD01008428;AGCD01008429;XM_005376277;XM_005376278 XP_005376334;XP_005376335 MODEL 8722030 protein-coding Fam241b family with sequence similarity 241 member B ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955437 21526944 21529611 - 102020051 AGCD01034908;GBDI01353327;XM_005390080;XM_013516711 XP_005390137;XP_013372165 MODEL 9058965 protein-coding Ipp intracisternal A particle-promoted polypeptide ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955464 12562824 12589976 + 102027054 AGCD01050207;AGCD01050208;AGCD01050209;AGCD01050210;GBBH01138930;GBDF01077438;XM_005398697;XM_013521582;XM_013521583 XP_005398754;XP_013377036;XP_013377037 MODEL 10065053 protein-coding LOC106150057 uncharacterized LOC106150057 NW_004955463 13414812 13446351 - 106150057 AGCD01049866;AGCD01049867;XM_013521491 XP_013376945 MODEL 8958217 protein-coding Setd1a SET domain containing 1A, histone lysine methyltransferase ENCODES a protein that exhibits beta-catenin binding (ortholog); histone H3K4 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); positive regulation of gene expression (ortholog); positive regulation of neural precursor cell proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); blepharophimosis (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955493 7808652 7834886 + 102020131 AGCD01061227;AGCD01061228;AGCD01061229;GBCB01061270;XM_013504748 XP_013360202 MODEL 8826414 protein-coding Ptchd3 patched domain containing 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); sperm midpiece (ortholog) NW_004955476 11870822 11895903 - 102004160 AGCD01055475;GBDF01052329;XM_005401894 XP_005401951 MODEL 39132341 snrna U6 U6 spliceosomal RNA 8776911 pseudo LOC102003478 pre-mRNA-splicing regulator WTAP-like NW_004955514 116863 117609 + 102003478 AGCD01066997 MODEL 8814664 protein-coding LOC102023119 granzyme B(G,H)-like NW_004955409 35492731 35496027 + 102023119 AGCD01010424;GBDK01074388;XM_005376991 XP_005377048 MODEL 8701934 pseudo LOC102025191 60S ribosomal protein L23a pseudogene NW_004955578 358817 360090 + 102025191 AGCD01075477 MODEL 39134492 misc_rna 7SK 7SK RNA 10285813 ncrna LOC106147114 uncharacterized LOC106147114 NW_004955520 1429529 1432899 + 106147114 AGCD01068054;GBDF01280058;XR_001231869;XR_001231870 MODEL 8836314 protein-coding LOC102013512 olfactory receptor 4C12-like NW_004955422 189260 205015 - 102013512 AGCD01022401;GBDF01234708;XM_005383939 XP_005383996 MODEL 9046695 protein-coding Mitd1 microtubule interacting and trafficking domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN midbody abscission (ortholog); mitotic cytokinesis (ortholog); multivesicular body sorting pathway (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN membrane (ortholog); midbody (ortholog) NW_004955470 5493361 5509437 - 102010576 AGCD01052751;AGCD01052752;GBDJ01075595;XM_013522814;XM_013522815;XM_013522816;XM_013522817;XM_013522818 XP_013378268;XP_013378269;XP_013378270;XP_013378271;XP_013378272 MODEL 9026912 protein-coding Ndufa7 NADH:ubiquinone oxidoreductase subunit A7 ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955563 1074182 1080928 + 102015466 AGCD01074111;AGCD01074112;GBDK01044927;XM_005413133 XP_005413190 MODEL 8938464 protein-coding Glmn glomulin, FKBP associated protein ENCODES a protein that exhibits hepatocyte growth factor receptor binding (ortholog); signaling receptor binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); circulatory system development (ortholog); epigenetic regulation of gene expression (ortholog); ASSOCIATED WITH arteriovenous malformation (ortholog); Blue Rubber Bleb Nevus Syndrome (ortholog); breast carcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955423 2195428 2233389 + 102023275 AGCD01023470;GBCQ01151919;XM_005385048;XM_013514525;XM_013514526;XM_013514527;XM_013514528;XM_013514529;XM_013514530 XP_005385105;XP_013369979;XP_013369980;XP_013369981;XP_013369982;XP_013369983;XP_013369984 MODEL 8754435 protein-coding Csmd1 CUB and Sushi multiple domains 1 INVOLVED IN conditioned place preference (ortholog); female gonad development (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Asthma-Chronic Obstructive Pulmonary Disease Overlap Syndrome (ortholog) NW_004955403 55809895 57101986 + 102023972 AGCD01003127;AGCD01003128;AGCD01003129;AGCD01003130;AGCD01003131;AGCD01003132;AGCD01003133;AGCD01003134;AGCD01003135;AGCD01003136;AGCD01003137;AGCD01003138;AGCD01003139;AGCD01003140;AGCD01003141;AGCD01003142;AGCD01003143;AGCD01003144;AGCD01003145;AGCD01003146;AGCD01003147;AGCD01003148;GBDF01244781;XM_005373917 XP_005373974 MODEL 8801136 protein-coding LOC102007418 olfactory receptor 143-like NW_004955412 25270890 25271828 + 102007418 AGCD01013143;XM_005378419 XP_005378476 MODEL 9068373 protein-coding Gpatch11 G-patch domain containing 11 ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN kinetochore (ortholog); nucleoplasm (ortholog) NW_004955441 4879410 4890775 + 102030126 AGCD01036856;GBDF01278359;XM_005390865 XP_005390922 MODEL 8725467 protein-coding LOC102012389 PRAME family member 6-like NW_004955618 32981 36268 - 102012389 AGCD01077283;AGCD01077284;XM_013510147 XP_013365601 MODEL 8978825 protein-coding Naa30 N-alpha-acetyltransferase 30, NatC catalytic subunit ENCODES a protein that exhibits protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN protein stabilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatC complex (ortholog) NW_004955466 11287789 11308449 + 102021542 AGCD01051087;GBCB01022352;GBDF01011220;XM_005399254 XP_005399311 MODEL 8861327 protein-coding LOC102004889 sterol 26-hydroxylase, mitochondrial ENCODES a protein that exhibits cholestanetetraol 26-dehydrogenase activity (ortholog); cholesterol 26-hydroxylase activity (ortholog); heme binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); calcitriol biosynthetic process from calciol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955453 14601495 14647383 - 102004889 AGCD01044871;GBCE01032755;XM_005395627 XP_005395684 MODEL 9045238 protein-coding Trpc1 transient receptor potential cation channel subfamily C member 1 ENCODES a protein that exhibits ATPase binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); cellular response to hypoxia (ortholog); melanin biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cervical cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cation channel complex (ortholog); costamere (ortholog) NW_004955508 3143868 3211613 - 102013194 AGCD01065805;GBCE01163015;GBDF01158759;XM_005407739 XP_005407796 MODEL 9039309 protein-coding LOC102024500 vomeronasal type-2 receptor 116-like NW_004955524 669389 691978 + 102024500 AGCD01068689;AGCD01068690;AGCD01068691;XM_013507232 XP_013362686 MODEL 8762819 protein-coding Ddx39b DExD-box helicase 39B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on RNA (ortholog); ATP-dependent protein binding (ortholog); INVOLVED IN liver development (ortholog); mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; spliceosome pathway; ASSOCIATED WITH type 1 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955437 72835 84045 - 102009541 AGCD01034101;GBCE01002580;XM_013516925;XM_013516926 XP_013372379;XP_013372380 MODEL 8805567 ncrna LOC102005221 uncharacterized LOC102005221 NW_004955454 2294868 2299079 + 102005221 AGCD01045015;GBDI01003932;XR_262766;XR_262767 MODEL 39134182 misc_rna 7SK 7SK RNA 8722068 protein-coding Snrpn small nuclear ribonucleoprotein polypeptide N INVOLVED IN response to hormone (ortholog); ASSOCIATED WITH Angelman syndrome (ortholog); autistic disorder (ortholog); Prader-Willi syndrome (ortholog); FOUND IN U1 snRNP (ortholog); U2 snRNP (ortholog) NW_004955416 31668789 31674144 + 102023030 AGCD01017768;XM_013512673 XP_013368127 MODEL 39131718 rrna 5S_rRNA 5S ribosomal RNA 9027736 ncrna LOC102010035 uncharacterized LOC102010035 NW_004955460 30819 34048 + 102010035 AGCD01048329;GBDF01187342;XR_263021 MODEL 9005465 protein-coding LOC102008878 olfactory receptor 5AN1-like NW_004955511 3869171 3870109 + 102008878 AGCD01066479;XM_005408266 XP_005408323 MODEL 39132351 rrna 5S_rRNA 5S ribosomal RNA 8942378 protein-coding Wdr27 WD repeat domain 27 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955411 3928775 4123191 + 102021105 AGCD01011562;AGCD01011563;AGCD01011564;AGCD01011565;AGCD01011566;AGCD01011567;AGCD01011568;AGCD01011569;AGCD01011570;AGCD01011571;GBDK01107452;XM_013510744;XM_013510746;XM_013510747;XM_013510748;XM_013510749;XM_013510750 XP_013366198;XP_013366200;XP_013366201;XP_013366202;XP_013366203;XP_013366204 MODEL 8930553 ncrna LOC102010832 uncharacterized LOC102010832 NW_004955437 2142308 2145021 + 102010832 AGCD01034260;GBDF01276932;XR_261830 MODEL 8701161 protein-coding Hnmt histamine N-methyltransferase ENCODES a protein that exhibits histamine N-methyltransferase activity (ortholog); N-methyltransferase activity (ortholog); selenol Se-methyltransferase activity (ortholog); INVOLVED IN histamine catabolic process (ortholog); histamine metabolic process (ortholog); hyperosmotic response (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; homocysteine metabolic pathway; ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955440 5084198 5137577 + 102012366 AGCD01036271;GBDJ01186894;XM_005390770;XM_005390771;XM_005390772;XM_013517507;XM_013517508 XP_005390827;XP_005390828;XP_005390829;XP_013372961;XP_013372962 MODEL 8765535 protein-coding Kif15 kinesin family member 15 ASSOCIATED WITH acute myeloid leukemia (ortholog); Braddock-Carey Syndrome 2 (ortholog); Breast Cancer, Familial (ortholog) NW_004955420 26774506 26828301 - 102008630 AGCD01021431;AGCD01021432;AGCD01021433;GBBH01213614;XM_005383474;XM_013513372;XM_013513373;XM_013513374;XM_013513375 XP_005383531;XP_013368826;XP_013368827;XP_013368828;XP_013368829 MODEL 9048912 ncrna LOC102023482 uncharacterized LOC102023482 NW_004955421 1031449 1034746 - 102023482 AGCD01021587;GBBH01057690;XR_260783 MODEL 8756821 protein-coding Ascc2 activating signal cointegrator 1 complex subunit 2 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosolic ribosome (ortholog); DNA repair complex (ortholog); nuclear speck (ortholog) NW_004955455 4032357 4077900 - 102012058 AGCD01045664;AGCD01045665;AGCD01045666;GBDK01230854;XM_005396225;XM_013520428;XM_013520429;XM_013520430;XM_013520431 XP_005396282;XP_013375882;XP_013375883;XP_013375884;XP_013375885 MODEL 8920125 protein-coding Plcxd3 phosphatidylinositol specific phospholipase C X domain containing 3 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955426 25563222 25719939 - 102026768 AGCD01026723;AGCD01026724;AGCD01026725;AGCD01026726;AGCD01026727;AGCD01026728;GBCQ01014740;XM_005386247 XP_005386304 MODEL 8942528 protein-coding Ippk inositol-pentakisphosphate 2-kinase ENCODES a protein that exhibits inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955515 5170164 5219130 + 102029103 AGCD01067342;AGCD01067343;GBDJ01189661;XM_005408913;XM_005408914;XM_013506872 XP_005408970;XP_005408971;XP_013362326 MODEL 9044402 protein-coding Ndufa8 NADH:ubiquinone oxidoreductase subunit A8 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); Nuclear Type Mitochondrial Complex I Deficiency 37 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955419 5903392 5917045 + 102011317 AGCD01019843;GBDJ01082304;XM_005382541 XP_005382598 MODEL 9026807 protein-coding LOC102005915 translation initiation factor IF-2-like NW_004955465 13253449 13255976 - 102005915 AGCD01050595;GBDJ01330279;XM_005399010 XP_005399067 MODEL 8920943 protein-coding Ptchd4 patched domain containing 4 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955437 12253731 12423865 - 102014709 AGCD01034603;AGCD01034604;AGCD01034605;AGCD01034606;AGCD01034607;AGCD01034608;GBDF01162944;XM_005389880 XP_005389937 MODEL 8896336 pseudo LOC102006265 serine/arginine-rich splicing factor 12 pseudogene NW_004955430 10505467 10561459 + 102006265 AGCD01029436;AGCD01029437;AGCD01029438 MODEL 9011989 protein-coding Cysltr2 cysteinyl leukotriene receptor 2 ENCODES a protein that exhibits cysteinyl leukotriene receptor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); negative regulation of glial cell proliferation (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH otitis media; aspirin-induced respiratory disease (ortholog); asthma (ortholog); FOUND IN membrane (ortholog) NW_004955431 2203342 2282635 + 102018629 AGCD01029924;AGCD01029925;AGCD01029926;GBDI01106238;XM_005387568;XM_005387569;XM_013515743 XP_005387625;XP_005387626;XP_013371197 MODEL 8852282 protein-coding CUNH15orf39 chromosome unknown C15orf39 homolog INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955450 2900456 2905748 - 102003077 AGCD01042411;GBDI01216199;XM_013519039 XP_013374493 MODEL 9010415 protein-coding Birc2 baculoviral IAP repeat containing 2 ENCODES a protein that exhibits FBXO family protein binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); necroptotic process (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN FasL mediated signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); bowenoid papulosis (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955412 5658322 5685628 + 102012516 AGCD01012645;AGCD01012646;AGCD01012647;AGCD01012648;GBCB01002048;GBDI01082457;XM_013511020 XP_013366474 MODEL 8892063 pseudo LOC102004890 centromere protein I pseudogene NW_004955406 23401612 23413876 + 102004890 AGCD01006171;XM_005375058 MODEL 8996205 protein-coding Muc7 mucin 7, secreted INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955447 2511841 2520312 - 102025856 AGCD01040546;GBBH01049128;XM_005392787 XP_005392844 MODEL 8964917 pseudo LOC102011998 derlin-1 pseudogene NW_004955422 13345152 13349677 + 102011998 AGCD01022821 MODEL 8893509 pseudo LOC102003109 zinc finger CCCH domain-containing protein 11A pseudogene NW_004955467 2952870 2954035 + 102003109 AGCD01051321 MODEL 10095163 ncrna LOC106149267 uncharacterized LOC106149267 NW_004955441 19865939 19872060 - 106149267 AGCD01037380;XR_001235323 MODEL 8950980 pseudo LOC102021423 acid sphingomyelinase-like phosphodiesterase 3a pseudogene NW_004955408 15529175 15530254 - 102021423 AGCD01008420 MODEL 9026189 protein-coding Nudt9 nudix hydrolase 9 ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); INVOLVED IN ADP catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955474 2402400 2438145 - 102015402 AGCD01054291;AGCD01054292;GBDF01018574;XM_005401336;XM_013502718;XM_013502719 XP_005401393;XP_013358172;XP_013358173 MODEL 10209624 ncrna LOC106150058 uncharacterized LOC106150058 NW_004955463 12929242 12935961 - 106150058 AGCD01049860;GBDF01165326;XR_001236629 MODEL 8884717 protein-coding Fip1l1 factor interacting with PAPOLA and CPSF1 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955447 17265269 17334197 - 102011709 AGCD01041116;AGCD01041117;AGCD01041118;GBDI01017847;XM_005392905;XM_005392906;XM_005392907;XM_005392908;XM_005392909;XM_005392910;XM_005392911;XM_005392912;XM_005392913 XP_005392962;XP_005392963;XP_005392964;XP_005392965;XP_005392966;XP_005392967;XP_005392968;XP_005392969;XP_005392970 MODEL 8773156 protein-coding Fam25a family with sequence similarity 25 member A NW_004955510 5975395 5977534 + 102012674 AGCD01066297;AGCD01066298;GBDJ01000716;XM_005407909 XP_005407966 MODEL 39132343 snrna U6 U6 spliceosomal RNA 9062899 pseudo LOC102007765 mitochondrial fission factor-like NW_004955416 10152452 10153091 + 102007765 AGCD01017109 MODEL 8704500 ncrna LOC102018063 uncharacterized LOC102018063 NW_004955460 12992444 12996471 - 102018063 AGCD01048666;GBDK01027678;XR_001236498;XR_001236499 MODEL 8952184 ncrna LOC102012393 uncharacterized LOC102012393 NW_004955403 55119286 55129586 - 102012393 AGCD01003110;GBDF01159103;XR_001234447;XR_259276 MODEL 8862197 protein-coding Gpatch2 G-patch domain containing 2 INVOLVED IN cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); long QT syndrome (ortholog); FOUND IN nuclear speck (ortholog) NW_004955406 800496 963004 + 102009012 AGCD01005622;AGCD01005623;GBDF01075248;XM_005374711;XM_005374713;XM_013519835;XM_013519850;XM_013519852 XP_005374768;XP_005374770;XP_013375289;XP_013375304;XP_013375306 MODEL 8840746 protein-coding Plcz1 phospholipase C zeta 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN calcium ion transport (ortholog); egg activation (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); spermatogenic failure 17 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955413 14791750 14846327 - 102011640 AGCD01014051;AGCD01014052;AGCD01014053;GBDF01083196;XM_005379040;XM_013511282;XR_001232940;XR_260080 XP_005379097;XP_013366736 MODEL 8808982 protein-coding Hectd3 HECT domain E3 ubiquitin protein ligase 3 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955464 13230534 13238953 + 102006009 AGCD01050265;GBCB01061479;GBDJ01189042;XM_005398789;XM_013521723 XP_005398846;XP_013377177 MODEL 8712262 protein-coding LOC102023128 cytochrome c oxidase assembly protein COX16 homolog, mitochondrial INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 22 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955466 130341 142969 + 102023128 AGCD01050650;AGCD01050651;GBCQ01038746;XM_005399020 XP_005399077 MODEL 8969750 ncrna LOC102025192 uncharacterized LOC102025192 NW_004955402 9308678 9320535 + 102025192 AGCD01000213;GBDF01192767;XR_259045 MODEL 8943019 protein-coding Trpc3 transient receptor potential cation channel subfamily C member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-activated cation channel activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); positive regulation of calcium ion transport into cytosol (ortholog); positive regulation of cardiac muscle hypertrophy in response to stress (ortholog); ASSOCIATED WITH Albuminuria (ortholog); bipolar disorder (ortholog); cerebellar ataxia type 41 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955428 18628951 18678525 + 102017360 AGCD01028069;GBCB01100950;XM_005386779;XM_013515247 XP_005386836;XP_013370701 MODEL 9019269 protein-coding LOC102005225 SEC14-like protein 4 NW_004955455 4754888 4766499 - 102005225 AGCD01045688;GBDK01339586;XM_013520306 XP_013375760 MODEL 8802157 protein-coding LOC102013514 vomeronasal type-1 receptor 4-like NW_004955494 8280036 8280923 + 102013514 AGCD01061582;XM_005405545 XP_005405602 MODEL 8847908 ncrna LOC102006268 uncharacterized LOC102006268 NW_004955432 9553990 9572917 + 102006268 AGCD01030908;AGCD01030909;GBDF01017350;XR_261521 MODEL 8941422 protein-coding Snta1 syntrophin alpha 1 ENCODES a protein that exhibits ATPase binding (ortholog); dystroglycan binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN neuromuscular junction development (ortholog); regulation of heart rate (ortholog); regulation of sodium ion transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Brugada syndrome (ortholog); dilated cardiomyopathy (ortholog); FOUND IN neuromuscular junction (ortholog); postsynaptic membrane (ortholog); protein-containing complex (ortholog) NW_004955422 27844699 27872104 + 102003779 AGCD01023337;AGCD01023338;AGCD01023339;GBBH01006232;GBDF01306217;XM_013514317 XP_013369771 MODEL 8759671 protein-coding Mitf melanocyte inducing transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN bone remodeling (ortholog); camera-type eye development (ortholog); cell differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Albinism (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytoplasm (ortholog); lysosomal membrane (ortholog); nucleus (ortholog) NW_004955421 17948117 18157379 - 102007905 AGCD01022034;AGCD01022035;AGCD01022036;AGCD01022037;GBCQ01094737;XM_005383791;XM_005383792;XM_005383794;XM_005383795;XM_013513760;XM_013513761;XM_013513762 XP_005383848;XP_005383849;XP_005383851;XP_005383852;XP_013369214;XP_013369215;XP_013369216 MODEL 39132358 rrna 5S_rRNA 5S ribosomal RNA 8911576 protein-coding Bahd1 bromo adjacent homology domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin silencing complex (ortholog); nucleoplasm (ortholog) NW_004955416 7376794 7388577 + 102020799 AGCD01016976;GBDF01188849;XM_005381237;XM_013512626;XM_013512627 XP_005381294;XP_013368080;XP_013368081 MODEL 8868575 protein-coding Gabrg3 gamma-aminobutyric acid type A receptor subunit gamma3 ENCODES a protein that exhibits chloride channel activity (ortholog); GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Angelman syndrome (ortholog); autistic disorder (ortholog); Brain Injuries (ortholog); FOUND IN GABA-ergic synapse (ortholog); plasma membrane (ortholog); synaptic membrane (ortholog) NW_004955533 1962175 2495877 - 102004319 AGCD01070383;AGCD01070384;AGCD01070385;AGCD01070386;AGCD01070387;AGCD01070388;AGCD01070389;AGCD01070390;AGCD01070391;AGCD01070392;AGCD01070393;GBCE01138252;XM_013507695;XM_013507696 XP_013363149;XP_013363150 MODEL 8914093 pseudo LOC102010833 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955532 3917497 3917975 - 102010833 AGCD01070305 MODEL 8923117 ncrna LOC102022766 uncharacterized LOC102022766 NW_004955402 62341515 62343840 - 102022766 AGCD01001641;GBDF01249798;XR_259123 MODEL 8730836 protein-coding Wdr3 WD repeat domain 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) NW_004955435 21038053 21069213 + 102012798 AGCD01033468;GBCE01085305;XM_005389069;XM_005389070 XP_005389126;XP_005389127 MODEL 8732730 pseudo LOC102003479 tumor susceptibility gene 101 protein pseudogene NW_004955515 383004 383850 - 102003479 AGCD01067198;XR_264530 MODEL 9017327 protein-coding Glmp glycosylated lysosomal membrane protein INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); protein localization to lysosome (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955545 2436718 2439988 - 102025290 AGCD01071901;GBCB01004999;XM_005411669 XP_005411726 MODEL 8842155 protein-coding CUNH15orf40 chromosome unknown C15orf40 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955416 13669931 13681991 + 102004067 AGCD01017231;AGCD01017232;GBDF01162166;XM_005381467;XM_013512496;XM_013512497 XP_005381524;XP_013367950;XP_013367951 MODEL 8753328 protein-coding Setd1b SET domain containing 1B, histone lysine methyltransferase ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); histone methyltransferase complex (ortholog) NW_004955482 6598176 6621944 - 102003135 AGCD01057403;AGCD01057404;AGCD01057405;AGCD01057406;GBCB01131998;GBDK01358092;XM_013503539 XP_013358993 MODEL 9050315 protein-coding LOC102007420 cytochrome P450 2D16-like NW_004955413 27581708 27585916 - 102007420 AGCD01014517;GBCQ01010821;XM_005379405 XP_005379462 MODEL 8890102 ncrna LOC102023487 uncharacterized LOC102023487 NW_004955493 6918924 6924538 + 102023487 AGCD01061147;AGCD01061148;GBDI01319978;XR_001231270 MODEL 8975743 pseudo LOC102024501 protein DBF4 homolog A-like NW_004955435 9744623 9748017 + 102024501 AGCD01033062;AGCD01033063 MODEL 9006661 protein-coding Ascc3 activating signal cointegrator 1 complex subunit 3 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN DNA alkylation repair (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Autosomal Recessive Intellectual Developmental Disorder 81 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); DNA repair complex (ortholog) NW_004955411 26305103 26599375 - 102026727 AGCD01012178;AGCD01012179;AGCD01012180;GBCB01058124;XM_005377812;XM_005377813;XM_005377814 XP_005377869;XP_005377870;XP_005377871 MODEL 10245662 protein-coding LOC106147115 uncharacterized LOC106147115 NW_004955520 1874728 1876712 + 106147115 AGCD01068064;GBDF01260482;GBDJ01219618;XM_013507027 XP_013362481 MODEL 8736685 pseudo LOC102003482 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 pseudogene NW_004955535 3151906 3152089 + 102003482 AGCD01070687 MODEL 8901826 ncrna LOC102010037 uncharacterized LOC102010037 NW_004955460 11260440 11300237 + 102010037 AGCD01048631;GBDF01076385;XR_001236536;XR_263060 MODEL 8705810 protein-coding Cysrt1 cysteine rich tail 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); establishment of skin barrier (ortholog); FOUND IN cornified envelope (ortholog) NW_004955513 5223124 5224650 + 102010396 AGCD01066963;GBDI01327324;XM_005408604 XP_005408661 MODEL 39131532 protein-coding HNRNPA0 heteroous nuclear ribonucleoprotein A0 9010583 ncrna LOC102021425 uncharacterized LOC102021425 NW_004955409 23740604 23772120 - 102021425 AGCD01010072;AGCD01010073;GBDK01264000;XR_259789 MODEL 9002193 protein-coding Kif16b kinesin family member 16B ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); early endosome to late endosome transport (ortholog); endoderm development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); early endosome membrane (ortholog) NW_004955415 25449734 25740697 - 102006573 AGCD01016581;AGCD01016582;AGCD01016583;AGCD01016584;AGCD01016585;GBDJ01355401;XM_005380898;XM_013512329;XM_013512330;XM_013512331;XM_013512332 XP_005380955;XP_013367783;XP_013367784;XP_013367785;XP_013367786 MODEL 39134493 misc_rna 7SK 7SK RNA 8717240 protein-coding Iqank1 IQ motif and ankyrin repeat containing 1 ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955454 2427621 2461556 + 102011174 AGCD01045020;AGCD01045021;GBCE01142105;XM_005395804;XM_005395805;XM_005395806;XM_013520055;XM_013520056;XM_013520057 XP_005395861;XP_005395862;XP_005395863;XP_013375509;XP_013375510;XP_013375511 MODEL 39134183 misc_rna 7SK 7SK RNA 8934344 protein-coding Ptcra pre T cell antigen receptor alpha INVOLVED IN alpha-beta T cell differentiation (ortholog); negative regulation of thymocyte apoptotic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Immunodeficiency 126 (ortholog); polycystic ovary syndrome (ortholog); Zellweger syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 8920997 8927354 + 102025508 AGCD01034507;GBCQ01091734;XM_005389728;XM_005389729;XM_005389730;XM_005389731;XM_005389732;XM_013516772 XP_005389785;XP_005389786;XP_005389787;XP_005389788;XP_005389789;XP_013372226 MODEL 8723832 protein-coding Ddx3x DEAD-box helicase 3 X-linked ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); CTPase activity (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); cellular response to osmotic stress (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); FOUND IN canonical inflammasome complex (ortholog); cell leading edge (ortholog); centrosome (ortholog) NW_004955565 1387043 1403624 - 102030251 AGCD01074316;AGCD01074317;GBCB01000529;XM_005413259 XP_005413316 MODEL 39131719 rrna 5S_rRNA 5S ribosomal RNA 8811918 pseudo LOC102008879 protein kinase C iota type pseudogene NW_004955430 16780162 16781452 + 102008879 AGCD01029645 MODEL 8726571 pseudo LOC102003484 RNA-binding protein 25 pseudogene NW_004955437 14612893 14618799 - 102003484 AGCD01034678 MODEL 8904411 ncrna LOC102003110 uncharacterized LOC102003110 NW_004955468 3568605 3569514 - 102003110 AGCD01051863;GBDI01159838;XR_001236890;XR_263383 MODEL 8903857 ncrna LOC102005231 uncharacterized LOC102005231 NW_004955458 14978213 15025603 - 102005231 AGCD01047858;AGCD01047859;AGCD01047860;GBDF01226889;XR_001236482;XR_263001 MODEL 10305045 ncrna LOC106149268 uncharacterized LOC106149268 NW_004955405 11390205 11392809 - 106149268 AGCD01004833;GBDJ01391579;XR_001235324 MODEL 8934089 protein-coding LOC102013519 probable N-acetyltransferase CML1 NW_004955424 12047830 12049545 + 102013519 AGCD01024593;GBCQ01036376;XM_005385553 XP_005385610 MODEL 8734164 protein-coding Csmd2 CUB and Sushi multiple domains 2 INVOLVED IN maintenance of postsynaptic density structure (ortholog); postsynaptic density assembly (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955452 11695182 12274450 - 102009678 AGCD01044343;AGCD01044344;AGCD01044345;AGCD01044346;AGCD01044347;AGCD01044348;AGCD01044349;AGCD01044350;GBDI01214799;XM_005395116;XM_005395117;XM_013519719;XM_013519720;XM_013519721 XP_005395173;XP_005395174;XP_013375173;XP_013375174;XP_013375175 MODEL 8720375 pseudo LOC102005916 COMM domain-containing protein 8 pseudogene NW_004955466 2360352 2361351 - 102005916 AGCD01050734 MODEL 8849452 protein-coding Naa35 N-alpha-acetyltransferase 35, NatC auxiliary subunit INVOLVED IN negative regulation of apoptotic process (ortholog); smooth muscle cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatC complex (ortholog) NW_004955432 1503093 1572655 - 102026032 AGCD01030597;AGCD01030598;GBDI01215792;XM_005387923;XM_013515950;XM_013515951;XM_013515952;XM_013515953 XP_005387980;XP_013371404;XP_013371405;XP_013371406;XP_013371407 MODEL 8896999 protein-coding Wdr31 WD repeat domain 31 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955419 14150881 14168256 + 102024679 AGCD01020013;GBDF01067538;XM_005382681 XP_005382738 MODEL 8781071 protein-coding CUNH15orf61 chromosome unknown C15orf61 homolog ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955450 8473239 8480571 - 102024744 AGCD01042566;GBBH01006691;XM_005393689 XP_005393746 MODEL 8864746 protein-coding LOC102007770 olfactory receptor 2T27-like NW_004955418 29729166 29730179 + 102007770 AGCD01019481;XM_005382359 XP_005382416 MODEL 8912562 protein-coding Setd2 SET domain containing 2, histone lysine methyltransferase ENCODES a protein that exhibits alpha-tubulin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell migration involved in vasculogenesis (ortholog); coronary vasculature morphogenesis (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955420 25070626 25178410 + 102005942 AGCD01021344;AGCD01021345;AGCD01021346;GBDF01080632;GBDF01080633;XM_013513427 XP_013368881 MODEL 8766947 protein-coding LOC102012401 myotubularin-related protein 3-like NW_004955455 4250135 4256614 - 102012401 AGCD01045673;GBDK01132871;XM_005396226;XM_005396227 XP_005396283;XP_005396284 MODEL 9037363 protein-coding Gpatch2l G-patch domain containing 2 like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955438 214882 263937 + 102028233 AGCD01034942;GBDF01024623;XM_005390151;XM_005390152;XM_005390153 XP_005390208;XP_005390209;XP_005390210 MODEL 8839260 ncrna LOC102023133 uncharacterized LOC102023133 NW_004955467 9636220 9637414 + 102023133 AGCD01051520;GBCB01098743;XR_263355 MODEL 8764915 protein-coding Nuf2 NUF2 component of NDC80 kinetochore complex ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); bone marrow disease (ortholog); FOUND IN kinetochore (ortholog); Ndc80 complex (ortholog); nucleoplasm (ortholog) NW_004955462 13082874 13142709 - 102008199 AGCD01049422;GBDF01219898;XM_005398255;XM_013521455;XM_013521456 XP_005398312;XP_013376909;XP_013376910 MODEL 8758735 protein-coding LOC102004893 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like NW_004955406 39002433 39011241 - 102004893 AGCD01006617;GBDF01120954;XM_005375239;XM_013522480;XM_013522484;XM_013522488 XP_005375296;XP_013377934;XP_013377938;XP_013377942 MODEL 8919289 protein-coding LOC102025195 vomeronasal type-1 receptor 4-like NW_004955584 426988 427899 - 102025195 AGCD01075941;XM_005414411 XP_005414468 MODEL 9012523 protein-coding Birc3 baculoviral IAP repeat containing 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); transferase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); necroptotic process (ortholog); negative regulation of necroptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); bowenoid papulosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955412 5624865 5643520 + 102012174 AGCD01012644;GBDJ01123917;XM_005377975;XM_013511018;XM_013511019 XP_005378032;XP_013366472;XP_013366473 MODEL 8917623 protein-coding Trpc4 transient receptor potential cation channel subfamily C member 4 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); calcium channel complex (ortholog); cation channel complex (ortholog) NW_004955431 8283585 8479524 + 102020596 AGCD01030124;AGCD01030125;AGCD01030126;GBDJ01262104;XM_005387650;XM_005387651;XM_013515720 XP_005387707;XP_005387708;XP_013371174 MODEL 8850595 protein-coding Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 ENCODES a protein that exhibits NADH dehydrogenase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN circadian rhythm (ortholog); response to glucose (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2J (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) NW_004955413 2435717 2475158 + 102005918 AGCD01013546;AGCD01013547;AGCD01013548;AGCD01013549;AGCD01013550;GBDF01045939;XM_005378740 XP_005378797 MODEL 8956805 protein-coding Sntb1 syntrophin beta 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN protein-containing complex (ortholog); synapse (ortholog) NW_004955417 25906013 26128134 - 102019501 AGCD01018495;AGCD01018496;AGCD01018497;AGCD01018498;GBDI01120696;XM_013512818 XP_013368272 MODEL 39132344 snrna U6 U6 spliceosomal RNA 8720677 pseudo LOC102022767 cytochrome P450 2U1-like NW_004955402 17306760 17461686 + 102022767 AGCD01000502;AGCD01000503;AGCD01000504;AGCD01000505;AGCD01000506 MODEL 8717825 protein-coding Mix23 mitochondrial matrix import factor 23 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955427 21639392 21667642 - 102009860 AGCD01027453;GBCQ01066280;XM_005386509;XM_005386510 XP_005386566;XP_005386567 MODEL 8909775 protein-coding Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); protein kinase binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); inflammatory response (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH gastric adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); synapse (ortholog) NW_004955408 32718736 32719409 - 102016132 AGCD01008853;GBDF01010779;XM_013507545 XP_013362999 MODEL 9036266 ncrna LOC102018066 uncharacterized LOC102018066 NW_004955411 12009836 12011426 - 102018066 AGCD01011835;GBDF01078244;XR_259933 MODEL 8787254 protein-coding LOC102023492 interferon-induced guanylate-binding protein 1-like NW_004955423 5260597 5285902 + 102023492 AGCD01023558;XM_005385355 XP_005385412 MODEL 9032666 pseudo LOC102024503 probable ribosome biogenesis protein RLP24 pseudogene NW_004955534 1615395 1615936 - 102024503 AGCD01070504 MODEL 9012517 ncrna LOC102012000 uncharacterized LOC102012000 NW_004955423 27287604 27301513 + 102012000 AGCD01024120;AGCD01024121;GBCE01127032;XR_001234059 MODEL 8921146 protein-coding Pld1 phospholipase D1 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); defense response to Gram-positive bacterium (ortholog); phosphatidic acid biosynthetic process (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN apical plasma membrane (ortholog); cholinergic synapse (ortholog); endocytic vesicle (ortholog) NW_004955420 1697716 1892741 - 102026748 AGCD01020576;AGCD01020577;AGCD01020578;AGCD01020579;AGCD01020580;AGCD01020581;AGCD01020582;GBDI01326771;XM_005382998;XM_005382999;XM_005383000;XM_005383002;XM_013513558;XM_013513559;XM_013513560;XM_013513561 XP_005383055;XP_005383056;XP_005383057;XP_005383059;XP_013369012;XP_013369013;XP_013369014;XP_013369015 MODEL 8951259 protein-coding Hectd4 HECT domain E3 ubiquitin protein ligase 4 INVOLVED IN glucose homeostasis (ortholog); glucose metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-induced mental disorder (ortholog); autism spectrum disorder (ortholog) NW_004955482 8714100 8847975 - 102008108 AGCD01057550;AGCD01057551;AGCD01057552;AGCD01057553;AGCD01057554;AGCD01057555;GBDI01138241;XM_005403190;XM_005403191;XM_005403193;XM_005403195;XM_013503686;XM_013503687;XM_013503689;XM_013503690 XP_005403247;XP_005403248;XP_005403250;XP_005403252;XP_013359140;XP_013359141;XP_013359143;XP_013359144 MODEL 10158841 ncrna LOC106147116 uncharacterized LOC106147116 NW_004955520 3521373 3522994 - 106147116 AGCD01068105;GBDI01078833;XR_001231871 MODEL 9051785 protein-coding Ascl1 achaete-scute family bHLH transcription factor 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal chromaffin cell differentiation (ortholog); carotid body glomus cell differentiation (ortholog); cell differentiation (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); high grade glioma (ortholog); Hyperplasia (ortholog); FOUND IN neuronal cell body (ortholog); nucleus (ortholog) NW_004955405 37941243 37943641 + 102006308 AGCD01005463;GBDI01387257;XM_005374573 XP_005374630 MODEL 8756103 pseudo LOC102006269 cytochrome b-c1 complex subunit Rieske, mitochondrial-like NW_004955432 23785334 23799271 + 102006269 AGCD01031294;AGCD01031295 MODEL 8836150 protein-coding LOC102010041 coatomer subunit gamma-2 NW_004955410 36982233 37086997 + 102010041 AGCD01011442;AGCD01011443;AGCD01011444;AGCD01011445;GBDF01004497;XM_005377554;XM_013510640 XP_005377611;XP_013366094 MODEL 10184994 ncrna LOC106150059 uncharacterized LOC106150059 NW_004955463 5329698 5357309 + 106150059 AGCD01049638;GBDF01014914;XR_001236630 MODEL 8878591 pseudo LOC102008880 10 kDa heat shock protein, mitochondrial pseudogene NW_004955512 3112785 3135884 - 102008880 AGCD01066696 MODEL 8858584 protein-coding Cystm1 cysteine rich transmembrane module containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955418 415703 475796 - 102010694 AGCD01018675;AGCD01018676;GBDI01021426;XM_005382046 XP_005382103 MODEL 39132364 rrna 5S_rRNA 5S ribosomal RNA 8972312 protein-coding Nufip1 nuclear FMR1 interacting protein 1 ENCODES a protein that exhibits ATPase binding (ortholog); DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear matrix (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955518 2761099 2801450 - 102012119 AGCD01067784;GBDK01271174;XM_005409078 XP_005409135 MODEL 8823183 pseudo LOC102005232 keratinocyte-associated protein 2-like NW_004955458 7970440 7970901 - 102005232 AGCD01047597 MODEL 8960120 protein-coding Gabrp gamma-aminobutyric acid type A receptor subunit pi ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955408 23708770 23735953 + 102018693 AGCD01008590;GBDJ01081235;XM_005376322 XP_005376379 MODEL 8931849 protein-coding Sntb2 syntrophin beta 2 PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Mesothelioma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955484 7391076 7489357 - 102005809 AGCD01058330;AGCD01058331;AGCD01058332;AGCD01058333;GBBH01076692;XM_013503934 XP_013359388 MODEL 8724932 pseudo LOC102021426 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955409 37557200 37558907 - 102021426 AGCD01010529 MODEL 8923650 protein-coding Mucl3 mucin like 3 ASSOCIATED WITH Diffuse Panbronchiolitis (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955583 880011 882770 + 102022142 AGCD01075872;AGCD01075873;GBDK01099671;XM_013509837 XP_013365291 MODEL 8720386 pseudo LOC102007426 GMP synthase [glutamine-hydrolyzing] pseudogene NW_004955476 3481522 3489789 + 102007426 AGCD01055252 MODEL 8759131 protein-coding Glo1 glyoxalase I ENCODES a protein that exhibits lactoylglutathione lyase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN glutathione metabolic process (ortholog); methylglyoxal metabolic process (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN glyoxalase metabolic pathway; Leigh disease pathway; primary hyperoxaluria type 2 pathway; ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); branchiootorenal syndrome 2 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955437 4728709 4749834 + 102014487 AGCD01034369;AGCD01034370;GBDF01047861;XM_013517101 XP_013372555 MODEL 8828715 ncrna LOC102005921 uncharacterized LOC102005921 NW_004955468 5830269 5849954 + 102005921 AGCD01051978;GBDF01113513;XR_263392 MODEL 8716390 protein-coding Kif17 kinesin family member 17 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); microtubule-based process (ortholog); protein-containing complex localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955452 1197839 1239209 - 102021077 AGCD01043836;GBDK01380952;XM_005394685;XM_005394686;XM_013519654;XM_013519655;XM_013519656;XM_013519657;XM_013519658;XM_013519659 XP_005394742;XP_005394743;XP_013375108;XP_013375109;XP_013375110;XP_013375111;XP_013375112;XP_013375113 MODEL 9025194 protein-coding Iqcb1 IQ motif containing B1 ENCODES a protein that exhibits BBSome binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN cilium assembly (ortholog); cytosolic ciliogenesis (ortholog); maintenance of animal organ identity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); photoreceptor connecting cilium (ortholog) NW_004955427 21120012 21171838 - 102007450 AGCD01027432;GBDF01126511;XM_013515101;XM_013515102;XM_013515103 XP_013370555;XP_013370556;XP_013370557 MODEL 39134184 misc_rna 7SK 7SK RNA 8872556 protein-coding CUNH15orf62 chromosome unknown C15orf62 homolog ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955416 7621794 7624837 + 102027846 AGCD01016995;GBDK01321324;XM_005381264 XP_005381321 MODEL 8944149 protein-coding Wdr33 WD repeat domain 33 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN fibrillar center (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog) NW_004955459 2740465 2841376 + 102022789 AGCD01048001;AGCD01048002;AGCD01048003;GBDF01081918;XM_005397576;XM_005397577;XM_005397580;XM_005397581;XM_005397582;XM_005397587;XM_005397588;XM_005397589;XM_013521041;XM_013521042;XM_013521044;XM_013521045;XM_013521046 XP_005397633;XP_005397634;XP_005397637;XP_005397638;XP_005397639;XP_005397644;XP_005397645;XP_005397646;XP_013376495;XP_013376496;XP_013376498;XP_013376499;XP_013376500 MODEL 39131720 rrna 5S_rRNA 5S ribosomal RNA 8958546 protein-coding LOC102012404 olfactory receptor 6C74-like NW_004955458 2414762 2415699 - 102012404 AGCD01047233;XM_013520846 XP_013376300 MODEL 9030734 ncrna LOC102023135 uncharacterized LOC102023135 NW_004955413 10767169 10776931 + 102023135 AGCD01013937;GBDF01016432;XR_260075 MODEL 9064547 protein-coding Ddx4 DEAD-box helicase 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); male infertility (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955446 11967222 12025537 - 102015061 AGCD01040220;AGCD01040221;AGCD01040222;GBDF01001983;XM_005392693;XM_005392694 XP_005392750;XP_005392751 MODEL 8739501 protein-coding Baiap2 BAR/IMD domain containing adaptor protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955506 1868624 1936786 - 102014380 AGCD01065277;GBBH01064214;XM_005407312;XM_005407314;XM_013506073;XM_013506074;XM_013506075 XP_005407369;XP_005407371;XP_013361527;XP_013361528;XP_013361529 MODEL 8811857 pseudo LOC102003112 olfactory receptor 10J4-like NW_004955468 11229311 11232918 + 102003112 AGCD01052123 MODEL 8895433 protein-coding LOC102010836 protein S100-A6-like NW_004955545 93760 170651 - 102010836 AGCD01071765;AGCD01071766;AGCD01071767;AGCD01071768;AGCD01071769;AGCD01071770;AGCD01071771;AGCD01071772;AGCD01071773;AGCD01071774;GBDJ01329857;XM_005411405;XR_001232180 XP_005411462 MODEL 8789974 protein-coding Trpc4ap transient receptor potential cation channel subfamily C member 4 associated protein ENCODES a protein that exhibits phosphatase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN hair follicle maturation (ortholog); protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog) NW_004955422 26301937 26383464 + 102016719 AGCD01023284;AGCD01023285;AGCD01023286;AGCD01023287;AGCD01023288;GBDF01005507;XM_005384808;XM_005384809 XP_005384865;XP_005384866 MODEL 8818004 ncrna LOC102013520 uncharacterized LOC102013520 NW_004955500 5962838 5972280 + 102013520 AGCD01063865;GBDF01213566;XR_264230 MODEL 8954057 protein-coding Csmd3 CUB and Sushi multiple domains 3 INVOLVED IN regulation of dendrite development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955417 19040692 20125790 - 102027071 AGCD01018340;AGCD01018341;AGCD01018342;AGCD01018343;AGCD01018344;AGCD01018345;AGCD01018346;AGCD01018347;AGCD01018348;AGCD01018349;AGCD01018350;AGCD01018351;AGCD01018352;AGCD01018353;AGCD01018354;AGCD01018355;AGCD01018356;AGCD01018357;AGCD01018358;AGCD01018359;AGCD01018360;AGCD01018361;AGCD01018362;AGCD01018363;AGCD01018364;AGCD01018365;AGCD01018366;AGCD01018367;AGCD01018368;GBDF01056629;XM_005381888 XP_005381945 MODEL 9065764 protein-coding Mixl1 Mix paired-like homeobox ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration involved in gastrulation (ortholog); digestive tract development (ortholog); endoderm development (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955489 418650 422428 + 102020346 AGCD01059804;GBCE01129938;GBDJ01123185;XM_013504451 XP_013359905 MODEL 9030277 protein-coding Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ENCODES a protein that exhibits DNA binding (ortholog); DNA/DNA annealing activity (ortholog); G-rich strand telomeric DNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 20 (ortholog); Animal Disease Models (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955458 1530163 1536874 + 102003094 AGCD01047188;AGCD01047189;AGCD01047190;GBDF01004157;XM_005397209;XM_005397210;XM_005397211;XM_013520944 XP_005397266;XP_005397267;XP_005397268;XP_013376398 MODEL 8902761 protein-coding Ptdss1 phosphatidylserine synthase 1 ENCODES a protein that exhibits L-serine-phosphatidylcholine phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955417 12268908 12327127 + 102005804 AGCD01018160;AGCD01018161;AGCD01018162;GBDF01049061;XM_005381833 XP_005381890 MODEL 8721741 pseudo LOC102007773 BAG family molecular chaperone regulator 5-like NW_004955484 8703188 8705376 + 102007773 AGCD01058394 MODEL 9026766 protein-coding Trpc5 transient receptor potential cation channel subfamily C member 5 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN negative regulation of dendrite morphogenesis (ortholog); neuron apoptotic process (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Albuminuria (ortholog); Congenital Microtia (ortholog); dental enamel hypoplasia (ortholog); FOUND IN calcium channel complex (ortholog); cation channel complex (ortholog); dendrite (ortholog) NW_004955490 3777756 4057275 + 102029978 AGCD01060174;AGCD01060175;AGCD01060176;AGCD01060177;AGCD01060178;AGCD01060179;AGCD01060180;XM_005404633;XM_013504508 XP_005404690;XP_013359962 MODEL 8990704 protein-coding Firrm FIGNL1 interacting regulator of recombination and mitosis ENCODES a protein that exhibits protein kinase binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN chromosome segregation (ortholog); DNA recombinase disassembly (ortholog); double-strand break repair involved in meiotic recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); DNA repair complex (ortholog); kinetochore (ortholog) NW_004955462 7477260 7518227 - 102008071 AGCD01049305;GBDI01326759;XM_013521413;XM_013521414 XP_013376867;XP_013376868 MODEL 9061998 pseudo LOC102004895 60S acidic ribosomal protein P0-like NW_004955406 38088292 38103146 + 102004895 AGCD01006590;AGCD01006591;AGCD01006592;AGCD01006593;AGCD01006594 MODEL 9017846 protein-coding Fam32a family with sequence similarity 32 member A ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955524 1366503 1370404 - 102025159 AGCD01068749;GBCE01001404;XM_005409492;XM_013507333 XP_005409549;XP_013362787 MODEL 39134185 misc_rna 7SK 7SK RNA 10178923 pseudo LOC106147117 60S ribosomal protein L21 pseudogene NW_004955520 1013203 1014582 - 106147117 AGCD01068040 MODEL 10125734 ncrna LOC106149269 uncharacterized LOC106149269 NW_004955441 13988780 13990058 + 106149269 AGCD01037168;GBDJ01153481;XR_001235326 MODEL 8929377 protein-coding Wdr35 WD repeat domain 35 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); brachydactyly (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955469 2484972 2546562 - 102011643 AGCD01052277;GBBH01005246;XM_005400340 XP_005400397 MODEL 39132345 snrna U6 U6 spliceosomal RNA 8771372 protein-coding Ndufaf1 NADH:ubiquinone oxidoreductase complex assembly factor 1 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); melanoma (ortholog); mitochondrial complex I deficiency (ortholog); FOUND IN mitochondrial complex I intermediate assembly complex (ortholog); mitochondrion (ortholog) NW_004955416 8210198 8222986 - 102007427 AGCD01017037;GBBH01126304;XM_005381284 XP_005381341 MODEL 8766572 ncrna LOC102022768 uncharacterized LOC102022768 NW_004955600 387729 392116 + 102022768 AGCD01076708;GBDF01162760;XR_265156 MODEL 8708958 protein-coding CYTB cytochrome b MT 14163 15302 + 15822234 JX312692 AFQ55789;YP_008080757 REVIEWED 8991736 ncrna LOC102018069 uncharacterized LOC102018069 NW_004955412 17652061 17663017 - 102018069 AGCD01012916;GBDF01083884;XR_001232864 MODEL 8735330 ncrna LOC102024506 uncharacterized LOC102024506 NW_004955540 1866085 1875395 - 102024506 AGCD01071308;GBCE01172657;XR_264820 MODEL 8756566 protein-coding Gpatch3 G-patch domain containing 3 INVOLVED IN negative regulation of RIG-I signaling pathway (ortholog); negative regulation of type I interferon production (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955452 6234241 6241949 - 102025075 AGCD01044098;GBDJ01029793;XM_005394885 XP_005394942 MODEL 9054409 protein-coding Mul1 mitochondrial E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits identical protein binding (ortholog); p53 binding (ortholog); SUMO transferase activity (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); mitochondrial fission (ortholog); mitochondrion localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955452 1059168 1066096 - 102019561 AGCD01043830;GBCE01024029;XM_005394681 XP_005394738 MODEL 8901590 pseudo LOC102025207 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L pseudogene NW_004955454 3332608 3333948 + 102025207 AGCD01045067 MODEL 8881290 protein-coding Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 ASSOCIATED WITH cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955460 336805 744906 - 102012167 AGCD01048340;AGCD01048341;AGCD01048342;AGCD01048343;AGCD01048344;AGCD01048345;XM_005397713;XM_013521104 XP_005397770;XP_013376558 MODEL 10351449 ncrna LOC106150060 uncharacterized LOC106150060 NW_004955463 3999310 4000215 + 106150060 AGCD01049600;GBDF01236154;XR_001236631 MODEL 39131482 protein-coding BIRC5 baculoviral IAP repeat containing 5 8717195 ncrna LOC102008881 uncharacterized LOC102008881 NW_004955520 1038221 1056799 - 102008881 AGCD01068041;AGCD01068042;GBDF01278076;XR_264581 MODEL 8875471 protein-coding LOC102010044 ribosomal large subunit pseudouridine synthase B-like NW_004955412 5260904 5261677 - 102010044 AGCD01012623;GBDF01280111;GBDF01280112;XM_013511125 XP_013366579 MODEL 8808180 pseudo LOC102012409 5-azacytidine-induced protein 2 pseudogene NW_004955409 26519198 26520981 - 102012409 AGCD01010189 MODEL 8915738 ncrna LOC102023136 uncharacterized LOC102023136 NW_004955413 23428407 23438675 - 102023136 AGCD01014331;GBDK01268729;XR_001233012;XR_001233013 MODEL 39132370 rrna 5S_rRNA 5S ribosomal RNA 39134494 misc_rna 7SK 7SK RNA 8890207 protein-coding Naa38 N-alpha-acetyltransferase 38, NatC auxiliary subunit INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (ortholog); NatC complex (ortholog); nucleoplasm (ortholog) NW_004955467 9082104 9083024 + 102029064 AGCD01051483;GBBH01031691;XM_013522065 XP_013377519 MODEL 8796796 protein-coding Gabrq gamma-aminobutyric acid type A receptor subunit theta ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955498 8048012 8064239 + 102011219 AGCD01063164;GBDJ01214778;XM_005406452 XP_005406509 MODEL 8933373 protein-coding LOC102021429 putative olfactory receptor 10D4 NW_004955412 24688405 24689343 - 102021429 AGCD01013121;XM_013510940 XP_013366394 MODEL 8842841 protein-coding Ddx41 DEAD-box helicase 41 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cell population proliferation (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); aplastic anemia (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 29748091 29753610 - 102029480 AGCD01008770;GBCE01054904;XM_005376447 XP_005376504 MODEL 39132376 rrna 5S_rRNA 5S ribosomal RNA 9056957 protein-coding LOC102005923 apolipoprotein L3-like NW_004955413 22422434 22450771 - 102005923 AGCD01014300;AGCD01014301;AGCD01014302;GBBH01182541;XM_005379647 XP_005379704 MODEL 8777927 pseudo LOC102023496 mortality factor 4-like protein 2 NW_004955424 12730315 12770211 - 102023496 AGCD01024618;AGCD01024619 MODEL 8739858 protein-coding LOC102003491 U3 small nucleolar RNA-associated protein 14 homolog A-like NW_004955546 975313 987398 + 102003491 AGCD01072034;GBBH01046731;XM_005411756 XP_005411813 MODEL 8954543 protein-coding Pld2 phospholipase D2 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to phorbol 13-acetate 12-myristate (ortholog); G protein-coupled receptor internalization (ortholog); neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; glycerophospholipid metabolic pathway; mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cervical cancer (ortholog); FOUND IN brush border membrane (ortholog); caveola (ortholog); lamellipodium (ortholog) NW_004955467 10239177 10250516 + 102016147 AGCD01051558;GBBH01166668;XM_005399602;XM_013522221;XM_013522222 XP_005399659;XP_013377675;XP_013377676 MODEL 8895606 protein-coding LOC102012002 probable N-acetyltransferase CML1 NW_004955424 12018064 12026229 + 102012002 AGCD01024589;GBCQ01036370;XM_005385547;XM_005385548;XM_005385549;XM_005385551;XM_013514658;XM_013514659;XM_013514660;XM_013514661 XP_005385604;XP_005385605;XP_005385606;XP_005385608;XP_013370112;XP_013370113;XP_013370114;XP_013370115 MODEL 8772855 protein-coding Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ENCODES a protein that exhibits DNA polymerase binding (ortholog); G-rich strand telomeric DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA geometric change (ortholog); lung development (ortholog); male gonad development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); chromatin (ortholog) NW_004955410 28032193 28042459 - 102026086 AGCD01011228;GBCQ01008932;XM_005377437;XM_013510602;XM_013510603;XM_013510604;XM_013510605 XP_005377494;XP_013366056;XP_013366057;XP_013366058;XP_013366059 MODEL 39131721 rrna 5S_rRNA 5S ribosomal RNA 8776073 protein-coding Trpc5os TRPC5 opposite strand NW_004955490 3952565 3981690 - 102029636 AGCD01060178;AGCD01060179;GBDF01209797;XM_005404632;XM_013504509 XP_005404689;XP_013359963 MODEL 8904511 protein-coding Ascl2 achaete-scute family bHLH transcription factor 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); chorionic trophoblast cell development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Colonic Neoplasms (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 14051140 14053521 - 102007908 AGCD01022847;GBBH01114854;XM_005384200;XM_013514320 XP_005384257;XP_013369774 MODEL 8832879 protein-coding LOC102006272 zinc finger protein 474-like NW_004955521 253407 305771 + 102006272 AGCD01068134;GBDJ01215638;XM_005409288;XM_013507095;XM_013507096 XP_005409345;XP_013362549;XP_013362550 MODEL 39134186 misc_rna 7SK 7SK RNA 9055335 protein-coding Fis1 fission, mitochondrial 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to lipid (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); chronic kidney disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); peroxisomal membrane (ortholog) NW_004955456 16057158 16060623 + 102022568 AGCD01046686;GBBH01162039;XM_005396858 XP_005396915 MODEL 9035853 pseudo LOC102003114 40S ribosomal protein S2 pseudogene NW_004955469 9118926 9122699 - 102003114 AGCD01052491 MODEL 8971701 protein-coding Nufip2 nuclear FMR1 interacting protein 2 ENCODES a protein that exhibits RNA binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955481 3922211 3950832 + 102011541 AGCD01056922;AGCD01056923;AGCD01056924;GBDJ01381453;XM_005402679 XP_005402736 MODEL 9038288 ncrna LOC102010838 uncharacterized LOC102010838 NW_004955440 18922189 18925290 - 102010838 AGCD01036623;GBDF01266858;XR_262046 MODEL 8919052 protein-coding Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 INVOLVED IN regulation of mitotic metaphase/anaphase transition (ortholog); ASSOCIATED WITH alopecia (ortholog); anisometropia (ortholog); anxiety disorder (ortholog); FOUND IN mitotic spindle (ortholog) NW_004955403 3902881 4096189 + 102019009 AGCD01001777;AGCD01001778;AGCD01001779;GBCE01186240;XM_013512122 XP_013367576 MODEL 9036121 ncrna LOC102013522 uncharacterized LOC102013522 NW_004955426 6475719 6492062 - 102013522 AGCD01026157;GBDF01145587;XR_261192 MODEL 39131379 protein-coding SNTB2 syntrophin beta 2 8996381 protein-coding Glod4 glyoxalase domain containing 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955481 2317869 2324352 - 102007120 AGCD01056874;XM_005402921 XP_005402978 MODEL 8839459 protein-coding Csn1s1 casein alpha s1 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955447 2908095 2928444 - 102028036 AGCD01040567;AGCD01040568;GBDF01209795;XM_013518489 XP_013373943 MODEL 8948217 protein-coding Mki67 marker of proliferation Ki-67 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); RNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell population proliferation (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); adult pineal parenchymal tumor (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) NW_004955477 5847288 5875970 - 102016472 AGCD01055598;AGCD01055599;GBCC01049145;XM_013503022 XP_013358476 MODEL 8767453 protein-coding LOC102023139 taste receptor type 2 member 125-like NW_004955413 8005210 8006148 - 102023139 AGCD01013841;XM_005379626 XP_005379683 MODEL 8947168 protein-coding Kif18a kinesin family member 18A ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); male meiotic nuclear division (ortholog); microtubule depolymerization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); intercellular bridge (ortholog) NW_004955476 7058682 7117496 - 102017657 AGCD01055345;AGCD01055346;GBDF01124958;XM_005401755 XP_005401812 MODEL 9026602 protein-coding LOC102022769 vomeronasal type-1 receptor 3-like NW_004955604 431062 441316 + 102022769 AGCD01076903;GBDF01230009;XM_005414884 XP_005414941 MODEL 39131378 protein-coding NDUFAF2 NADH:ubiquinone oxidoreductase complex assembly factor 2 8977515 pseudo LOC102007778 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955488 8069378 8071802 - 102007778 AGCD01059700 MODEL 8970421 ncrna LOC102021430 uncharacterized LOC102021430 NW_004955413 23270738 23276929 + 102021430 AGCD01014329;GBDF01129567;XR_260096 MODEL 39132380 rrna 5S_rRNA 5S ribosomal RNA 8866214 protein-coding LOC102004898 uncharacterized LOC102004898 NW_004955407 18817496 18870851 - 102004898 AGCD01007282;AGCD01007283;AGCD01007284;AGCD01007285;AGCD01007286;GBDF01036000;XM_013505906 XP_013361360 MODEL 8978206 protein-coding Baiap2l1 BAR/IMD domain containing adaptor protein 2 like 1 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN positive regulation of actin filament polymerization (ortholog); regulation of actin cytoskeleton organization (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); rheumatoid arthritis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955460 14174592 14259416 - 102029716 AGCD01048742;GBDF01160954;GBDK01139385;XM_005397915 XP_005397972 MODEL 10230194 ncrna LOC106149270 uncharacterized LOC106149270 NW_004955441 1909184 1920741 + 106149270 AGCD01036762;GBDF01263696;XR_001235330 MODEL 10239054 ncrna LOC106147118 uncharacterized LOC106147118 NW_004955520 1007104 1008125 + 106147118 AGCD01068040;GBDF01237317;XR_001231872 MODEL 39134187 misc_rna 7SK 7SK RNA 8967547 protein-coding Wdr36 WD repeat domain 36 INVOLVED IN regulation of axon extension (ortholog); retina homeostasis (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic asthma (ortholog); allergic rhinitis (ortholog); FOUND IN small-subunit processome (ortholog) NW_004955418 3988073 4023425 - 102017017 AGCD01018806;AGCD01018807;GBDK01006850;XM_005382167;XM_013513044 XP_005382224;XP_013368498 MODEL 9044640 protein-coding Iqcc IQ motif containing C ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955452 10574034 10576898 + 102018253 AGCD01044280;GBCQ01124429;XM_005395053 XP_005395110 MODEL 8824021 protein-coding Birc6 baculoviral IAP repeat containing 6 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN labyrinthine layer development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); autism spectrum disorder (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955441 740299 923920 + 102009992 AGCD01036733;AGCD01036734;AGCD01036735;AGCD01036736;AGCD01036737;AGCD01036738;AGCD01036739;AGCD01036740;GBDF01124876;XM_013517560;XM_013517561 XP_013373014;XP_013373015 MODEL 8742636 protein-coding Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); protein-L-histidine N-tele-methyltransferase activity (ortholog); INVOLVED IN actin filament organization (ortholog); positive regulation of muscle cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955438 20754593 20826570 - 102028681 AGCD01035521;AGCD01035522;AGCD01035523;GBDF01008952;XM_005390415;XM_005390417 XP_005390472;XP_005390474 MODEL 8960217 protein-coding Ptdss2 phosphatidylserine synthase 2 ENCODES a protein that exhibits CDP-diacylglycerol-serine O-phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955476 11554962 11585574 - 102022914 AGCD01055466;GBDJ01080587;XM_005401863;XM_013502927;XM_013502928;XM_013502929;XM_013502930;XM_013502931;XM_013502932 XP_005401920;XP_013358381;XP_013358382;XP_013358383;XP_013358384;XP_013358385;XP_013358386 MODEL 9017035 protein-coding Gabrr1 gamma-aminobutyric acid type A receptor subunit rho1 ENCODES a protein that exhibits GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); intracellular vesicle (ortholog) NW_004955411 15967857 16002199 - 102004681 AGCD01011963;GBCQ01164043;XM_005377743;XM_005377746;XM_005377747;XM_013510709;XM_013510710 XP_005377800;XP_005377803;XP_005377804;XP_013366163;XP_013366164 MODEL 8908136 ncrna LOC102003492 uncharacterized LOC102003492 NW_004955442 7304160 7304657 + 102003492 AGCD01037623;GBDF01000001;XR_262125 MODEL 8962943 protein-coding Mkks MKKS centrosomal shuttling protein ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); brain morphogenesis (ortholog); cartilage development (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955415 20292311 20315850 - 102024668 AGCD01016487;GBCC01035939;XM_005380873;XM_005380874;XM_013512303;XM_013512304;XM_013512305;XM_013512306;XM_013512308;XR_001233228 XP_005380930;XP_005380931;XP_013367757;XP_013367758;XP_013367759;XP_013367760;XP_013367762 MODEL 8794075 protein-coding LOC102012004 cx9C motif-containing protein 4-like NW_004955425 2298142 2298943 - 102012004 AGCD01025257;GBDF01080910;XM_005385839 XP_005385896 MODEL 9053136 pseudo LOC102021433 rRNA 2'-O-methyltransferase fibrillarin pseudogene NW_004955471 1185113 1185892 + 102021433 AGCD01052972 MODEL 10114810 ncrna LOC106150061 uncharacterized LOC106150061 NW_004955463 12747513 12763216 + 106150061 AGCD01049858;XR_001236632 MODEL 8828266 protein-coding Pld3 phospholipase D family member 3 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of toll-like receptor 9 signaling pathway (ortholog); positive regulation of intralumenal vesicle formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955578 884700 905426 - 102016536 AGCD01075500;GBCE01000031;XM_005414062;XM_005414063;XM_005414064;XM_005414066;XM_013509653;XM_013509654 XP_005414119;XP_005414120;XP_005414121;XP_005414123;XP_013365107;XP_013365108 MODEL 8995606 protein-coding LOC102007781 cytochrome b-c1 complex subunit 2, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 5 (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955493 655619 689705 + 102007781 AGCD01060859;GBDF01004785;XM_005405054 XP_005405111 MODEL 9025653 pseudo LOC102007430 protein archease pseudogene NW_004955481 2490488 2495172 - 102007430 AGCD01056876 MODEL 8726679 pseudo LOC102010047 nucleolar and spindle-associated protein 1 pseudogene NW_004955413 13435713 13437079 - 102010047 AGCD01014015 MODEL 8763512 protein-coding Trpc6 transient receptor potential cation channel subfamily C member 6 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to hypoxia (ortholog); negative regulation of dendrite morphogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Brain Hypoxia-Ischemia (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955412 4905039 5019678 - 102008513 AGCD01012608;AGCD01012609;AGCD01012610;AGCD01012611;AGCD01012612;GBCE01034660;GBDK01169350;XM_013511254 XP_013366708 MODEL 8741484 ncrna LOC102008892 uncharacterized LOC102008892 NW_004955439 2679785 2686659 - 102008892 AGCD01035657;GBDF01185074;XR_261968 MODEL 39132347 snrna U6 U6 spliceosomal RNA 8889751 protein-coding Fitm1 fat storage inducing transmembrane protein 1 ENCODES a protein that exhibits diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955409 36267121 36268462 - 102011845 AGCD01010454;GBDK01305527;XM_005377045 XP_005377102 MODEL 8734591 protein-coding Ascl3 achaete-scute family bHLH transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN epithelium development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955414 24688233 24691361 - 102024994 AGCD01015553;GBBH01032886;XM_005380248 XP_005380305 MODEL 9062424 ncrna LOC102018076 uncharacterized LOC102018076 NW_004955413 26991201 26996200 + 102018076 AGCD01014489;AGCD01014490;GBCB01118470;XR_260115 MODEL 8819946 protein-coding Naa40 N-alpha-acetyltransferase 40, NatD catalytic subunit ENCODES a protein that exhibits histone H2A acetyltransferase activity (ortholog); histone H4 acetyltransferase activity (ortholog); protein N-terminal-serine acetyltransferase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955422 21070615 21087238 - 102025019 AGCD01023099;GBDF01158053;XM_005384655 XP_005384712 MODEL 8831237 protein-coding Fam3a FAM3 metabolism regulating signaling molecule A INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); artery smooth muscle contraction (ortholog); ATP biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955580 1025481 1036752 - 102005532 AGCD01075642;GBDJ01318167;XM_005414207;XM_013509716;XR_001232481 XP_005414264;XP_013365170 MODEL 8831643 protein-coding LOC102022770 olfactory receptor 19-like NW_004955626 86184 87113 - 102022770 AGCD01077466;XM_005415024 XP_005415081 MODEL 8795211 protein-coding Mus81 MUS81 structure-specific endonuclease subunit ENCODES a protein that exhibits 3'-flap endonuclease activity (ortholog); crossover junction DNA endonuclease activity (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA repair (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH arterial tortuosity syndrome (ortholog); cervical cancer (ortholog); Marfan syndrome (ortholog); FOUND IN chromosome, telomeric region (ortholog); endodeoxyribonuclease complex (ortholog); fibrillar center (ortholog) NW_004955422 19471552 19479121 - 102027416 AGCD01023011;GBCB01043254;XM_005384456;XM_005384458;XM_005384459;XM_013513846;XM_013513848;XM_013513849;XM_013513850 XP_005384513;XP_005384515;XP_005384516;XP_013369300;XP_013369302;XP_013369303;XP_013369304 MODEL 8999372 ncrna LOC102005233 uncharacterized LOC102005233 NW_004955460 10800696 10803686 + 102005233 AGCD01048610;XR_001236511;XR_263052 MODEL 8758715 protein-coding Gpatch4 G-patch domain containing 4 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955545 2684827 2694733 - 102004204 AGCD01071916;AGCD01071917;GBDI01278863;XM_005411685;XM_005411687 XP_005411742;XP_005411744 MODEL 8797403 protein-coding Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 ENCODES a protein that exhibits mRNA binding (ortholog); RNA transmembrane transporter activity (ortholog); INVOLVED IN mRNA transport (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955403 19540814 19548417 - 102003932 AGCD01002133;GBCB01002496;GBCQ01000906;XM_013512733 XP_013368187 MODEL 9036934 pseudo LOC102012410 cullin-4B pseudogene NW_004955462 1327574 1331025 - 102012410 AGCD01049112 MODEL 8903338 pseudo LOC102006273 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial pseudogene NW_004955522 3958620 3960291 + 102006273 AGCD01068410 MODEL 39134495 misc_rna 7SK 7SK RNA 8903647 protein-coding Heg1 heart development protein with EGF like domains 1 INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac muscle tissue growth (ortholog); cell-cell junction organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); external side of plasma membrane (ortholog) NW_004955427 24035193 24115483 - 102020938 AGCD01027499;AGCD01027500;GBCB01100064;GBCE01075888;XM_005386545 XP_005386602 MODEL 8779950 protein-coding LOC102010839 cytochrome P450 2S1 ENCODES a protein that exhibits 12-hydroxyheptadecatrienoic acid synthase activity (ortholog); hydro-lyase activity (ortholog); monooxygenase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); prostaglandin metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955555 167634 183572 + 102010839 AGCD01073024;GBDK01317297;XM_005412321 XP_005412378 MODEL 39134188 misc_rna 7SK 7SK RNA 8889320 pseudo LOC102024507 kinesin-associated protein 3-like NW_004955437 19627016 19630188 + 102024507 AGCD01034861 MODEL 8941061 protein-coding CUNH16orf74 chromosome unknown C16orf74 homolog INVOLVED IN adaptive thermogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955541 824381 843420 - 102019432 AGCD01071361;GBCE01181560;GBDJ01336195;XM_005410980 XP_005411037 MODEL 9062683 protein-coding Csn2 casein beta ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN lactation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN extracellular region (ortholog) NW_004955447 2868899 2889969 + 102027696 AGCD01040567;GBCE01017349;XM_013518473 XP_013373927 MODEL 8779533 protein-coding Glod5 glyoxalase domain containing 5 ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955543 320087 321311 + 102022330 AGCD01071575;GBDF01225208;XM_005411367 XP_005411424 MODEL 8744163 protein-coding LOC102010049 olfactory receptor 52H1-like NW_004955414 21628748 21631134 + 102010049 AGCD01015424;XM_005380100 XP_005380157 MODEL 8811467 protein-coding Ddx42 DEAD-box helicase 42 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); regulation of apoptotic process (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cachexia (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955478 8009155 8052990 - 102021339 AGCD01056005;GBCE01076587;XM_005402189;XM_005402190 XP_005402246;XP_005402247 MODEL 8793600 protein-coding LOC102025212 zinc finger protein 709-like NW_004955408 2924 43257 + 102025212 AGCD01007905;AGCD01007906;AGCD01007907;GBDF01011173;XM_005375996;XM_013507810 XP_005376053;XP_013363264 MODEL 10312303 ncrna LOC106147120 uncharacterized LOC106147120 NW_004955520 1165597 1168792 - 106147120 AGCD01068046;AGCD01068047;GBDI01376278;XR_001231873 MODEL 8974569 protein-coding Ascl5 achaete-scute family bHLH transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH lobodontia (ortholog); FOUND IN chromatin (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955406 37264753 37265337 - 102004240 AGCD01006572;XM_005375475 XP_005375532 MODEL 8947267 protein-coding LOC102023141 interleukin-36 gamma NW_004955470 1330732 1339123 - 102023141 AGCD01052634;GBCC01001156;XM_013522843;XM_013522844 XP_013378297;XP_013378298 MODEL 9050685 protein-coding Wdr37 WD repeat domain 37 INVOLVED IN corpus callosum development (ortholog); lymphocyte homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); astigmatism (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955421 30097046 30161762 - 102023043 AGCD01022380;AGCD01022381;AGCD01022382;GBDF01221568;XM_005383910;XM_013513754;XM_013513755;XM_013513756;XM_013513758;XM_013513759 XP_005383967;XP_013369208;XP_013369209;XP_013369210;XP_013369212;XP_013369213 MODEL 39132386 rrna 5S_rRNA 5S ribosomal RNA 8713405 protein-coding Iqce IQ motif containing E INVOLVED IN limb morphogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to motile cilium (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955460 12676649 12724613 + 102013257 AGCD01048661;AGCD01048662;GBBH01003129;GBDF01005523;XM_013521153 XP_013376607 MODEL 8955068 protein-coding Ndufaf2 NADH:ubiquinone oxidoreductase complex assembly factor 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cilium assembly (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955446 7345467 7439885 - 102003186 AGCD01040112;AGCD01040113;GBDF01049272;XM_013518417;XM_013518418;XR_001235670;XR_001235671 XP_013373871;XP_013373872 MODEL 39131722 rrna 5S_rRNA 5S ribosomal RNA 8732715 ncrna LOC102003115 uncharacterized LOC102003115 NW_004955470 2942258 2951897 + 102003115 AGCD01052684;AGCD01052685;AGCD01052686;GBDF01056049;XR_263459 MODEL 8737061 protein-coding Setd4 SET domain containing 4 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955407 35215247 35239488 - 102004560 AGCD01007732;AGCD01007733;GBCE01108284;XM_005375712;XM_005375720;XM_013504516;XM_013504518;XM_013504520;XM_013504521;XM_013504526;XM_013504535;XM_013504538 XP_005375769;XP_005375777;XP_013359970;XP_013359972;XP_013359974;XP_013359975;XP_013359980;XP_013359989;XP_013359992 MODEL 9067808 protein-coding Fam3b FAM3 metabolism regulating signaling molecule B INVOLVED IN insulin secretion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955407 40914408 40939850 - 102023115 AGCD01007852;GBDI01327668;XM_005375853;XM_013506145;XM_013506148 XP_005375910;XP_013361599;XP_013361602 MODEL 8782665 pseudo LOC102005234 tRNA pseudouridine(38/39) synthase pseudogene NW_004955409 17845827 17846565 - 102005234 AGCD01009800 MODEL 8799119 protein-coding Musk muscle associated receptor tyrosine kinase ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cochlea development (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); long-term synaptic potentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome 4C (ortholog); congenital myasthenic syndrome 9 (ortholog); Congenital Myasthenic Syndrome, with Facial Dysmorphism, associated with Acetylcholine Receptor Deficiency (ortholog); FOUND IN cell projection (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955419 16387770 16484266 - 102013086 AGCD01020112;AGCD01020113;AGCD01020114;GBCB01009973;XM_005382732;XM_005382733;XM_005382734;XM_005382735 XP_005382789;XP_005382790;XP_005382791;XP_005382792 MODEL 8717689 protein-coding Pld4 phospholipase D family member 4 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); innate immune response (ortholog); phagocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955538 3296581 3303187 + 102029444 AGCD01071157;GBDJ01237040;XM_005410848 XP_005410905 MODEL 10388066 protein-coding LOC106149271 uncharacterized LOC106149271 NW_004955441 17030908 17055135 + 106149271 AGCD01037281;GBDF01128113;XM_013517624;XR_001235331;XR_001235332;XR_001235333;XR_001235334;XR_001235335;XR_001235336;XR_001235337;XR_001235338 XP_013373078 MODEL 9055423 protein-coding Sntg1 syntrophin gamma 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); ruffle membrane (ortholog) NW_004955454 9698609 10439874 + 102026291 AGCD01045349;AGCD01045350;AGCD01045351;AGCD01045352;AGCD01045353;AGCD01045354;AGCD01045355;AGCD01045356;AGCD01045357;AGCD01045358;AGCD01045359;AGCD01045360;AGCD01045361;AGCD01045362;AGCD01045363;AGCD01045364;AGCD01045365;AGCD01045366;GBDF01142064;XM_005396048;XM_005396049;XM_005396050 XP_005396105;XP_005396106;XP_005396107 MODEL 8986117 protein-coding Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ENCODES a protein that exhibits protein-containing complex binding (ortholog); RNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); epithelial to mesenchymal transition (ortholog); mRNA modification (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Mammary Neoplasms (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955408 2060288 2064998 - 102011086 AGCD01007986;GBCB01001136;GBDI01017477;XM_005376037;XM_013508056 XP_005376094;XP_013363510 MODEL 8823190 protein-coding LOC102005927 olfactory receptor 52A5-like NW_004955414 21125400 21126350 - 102005927 AGCD01015407;XM_005380494 XP_005380551 MODEL 39131398 protein-coding FITM2 fat storage inducing transmembrane protein 2 8822029 protein-coding Trpc7 transient receptor potential cation channel subfamily C member 7 ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); manganese ion transport (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); urinary bladder cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955408 31260767 31408852 - 102015178 AGCD01008824;GBDF01075659;XM_013507541 XP_013362995 MODEL 8788094 ncrna LOC102023499 uncharacterized LOC102023499 NW_004955426 18323676 18326033 + 102023499 AGCD01026520;GBDF01177224;XR_261201 MODEL 8706988 protein-coding Pten phosphatase and tensin homolog ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult behavior (ortholog); angiogenesis (ortholog); apoptotic process (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955425 5007811 5091829 - 102026655 AGCD01025329;AGCD01025330;AGCD01025331;AGCD01025332;GBDJ01081006;XM_013514767 XP_013370221 MODEL 8977587 protein-coding Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN membrane organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cell-cell contact zone (ortholog); clathrin complex (ortholog); vesicle membrane (ortholog) NW_004955413 24406856 24430779 - 102009825 AGCD01014366;AGCD01014367;GBDF01089669;XM_013511544 XP_013366998 MODEL 8854225 protein-coding LOC102003495 protein PBDC1-like NW_004955562 2207581 2209840 + 102003495 AGCD01074028;GBCE01099202;GBDI01000979;XM_005413095 XP_005413152 MODEL 39132387 rrna 5S_rRNA 5S ribosomal RNA 8728607 protein-coding LOC102023144 olfactory receptor 51F2-like NW_004955414 20313365 20314315 + 102023144 AGCD01015368;XM_005380468 XP_005380525 MODEL 8737536 protein-coding Nuggc nuclear GTPase, germinal center associated ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); DNA damage response (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955403 50507971 50558881 - 102009904 AGCD01002966;AGCD01002967;GBCE01187225;XM_005373760;XM_005373762;XM_005373763;XM_005373764 XP_005373817;XP_005373819;XP_005373820;XP_005373821 MODEL 8965842 protein-coding Mkln1 muskelin 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell-matrix adhesion (ortholog); neurotransmitter receptor transport postsynaptic membrane to endosome (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955410 36251987 36568537 - 102007975 AGCD01011422;AGCD01011423;AGCD01011424;AGCD01011425;AGCD01011426;AGCD01011427;AGCD01011428;AGCD01011429;AGCD01011430;AGCD01011431;GBCB01023173;XM_005377547;XM_005377548;XM_013510638;XR_259906 XP_005377604;XP_005377605;XP_013366092 MODEL 8998850 pseudo LOC102013523 heat shock protein HSP 90-alpha pseudogene NW_004955426 26341646 26343835 - 102013523 AGCD01026756 MODEL 9037512 ncrna LOC102007790 uncharacterized LOC102007790 NW_004955426 20154984 20166755 + 102007790 AGCD01026563;AGCD01026564;GBDF01299083;XR_261208 MODEL 8820927 protein-coding Cyth1 cytohesin 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955506 3920803 3997012 + 102005281 AGCD01065321;AGCD01065322;AGCD01065323;AGCD01065324;GBBH01209744;XM_005407370;XM_013506064;XM_013506065 XP_005407427;XP_013361518;XP_013361519 MODEL 8979167 pseudo LOC102008893 60S ribosomal protein L17 pseudogene NW_004955439 18545099 18545654 + 102008893 AGCD01036056 MODEL 39132348 snrna U6 U6 spliceosomal RNA 8716753 ncrna LOC102012411 uncharacterized LOC102012411 NW_004955411 2942448 2946613 + 102012411 AGCD01011526;GBCQ01140642;XR_259913 MODEL 8731138 protein-coding Kif18b kinesin family member 18B ENCODES a protein that exhibits cytoskeletal motor activity (ortholog); kinesin binding (ortholog); INVOLVED IN microtubule depolymerization (ortholog); mitotic cell cycle (ortholog); regulation of cell division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN astral microtubule (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 17707150 17722376 - 102022247 AGCD01043767;AGCD01043768;GBDF01192813;XM_005394558 XP_005394615 MODEL 8740356 protein-coding LOC102010840 serine protease 29-like NW_004955442 15998729 16000624 + 102010840 AGCD01037890;GBBH01115240;XM_005391588 XP_005391645 MODEL 8943823 protein-coding Helb DNA helicase B ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); DNA replication, synthesis of primer (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955458 12929345 12971059 + 102026400 AGCD01047793;AGCD01047794;GBDF01015721;XM_013520973;XR_001236467 XP_013376427 MODEL 8792434 protein-coding Birc7 baculoviral IAP repeat containing 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH adrenocortical carcinoma (ortholog); bladder urothelial carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955528 919246 922581 - 102010730 AGCD01069547;XM_013507431 XP_013362885 MODEL 8770712 protein-coding LOC102024508 forkhead box protein L1 NW_004955541 1387390 1392842 + 102024508 AGCD01071378;AGCD01071379;GBCE01132585;GBCE01150013;XM_013508009 XP_013363463 MODEL 8744817 pseudo LOC102010056 protein FAM136A-like NW_004955416 11217210 11218822 - 102010056 AGCD01017181 MODEL 8939455 protein-coding Gabrr3 gamma-aminobutyric acid type A receptor subunit rho3 ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); protein domain specific binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); restless legs syndrome (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic membrane (ortholog) NW_004955407 97769 143157 + 102010446 AGCD01006730;XM_005375489 XP_005375546 MODEL 8873963 pseudo LOC102021434 elongation factor 1-alpha 1 pseudogene NW_004955414 28395548 28396556 - 102021434 AGCD01015681;XR_260242 MODEL 9048459 ncrna LOC102004900 uncharacterized LOC102004900 NW_004955458 14888316 14977389 - 102004900 AGCD01047854;AGCD01047855;AGCD01047856;AGCD01047857;AGCD01047858;GBDJ01147231;XR_001236480;XR_001236481;XR_262999;XR_263000 MODEL 8909146 protein-coding Iqcf2 IQ motif containing F2 NW_004955532 3532747 3534214 + 102021173 AGCD01070286;GBDF01117995;XM_005410326 XP_005410383 MODEL 8768279 ncrna LOC102006276 uncharacterized LOC102006276 NW_004955435 16129063 16131676 + 102006276 AGCD01033295;GBCB01093390;XR_001234853;XR_261702 MODEL 8918043 protein-coding Gpatch8 G-patch domain containing 8 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN hemopoiesis (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955451 17395106 17463399 - 102007398 AGCD01043749;AGCD01043750;AGCD01043751;AGCD01043752;GBBH01164258;GBDF01085707;XM_013519264 XP_013374718 MODEL 9057820 ncrna LOC102007431 uncharacterized LOC102007431 NW_004955482 3993841 3998952 + 102007431 AGCD01057278;GBDI01245685;XR_001231001 MODEL 39131723 rrna 5S_rRNA 5S ribosomal RNA 39134496 misc_rna 7SK 7SK RNA 9015513 protein-coding LOC102003117 olfactory receptor 51B6-like NW_004955414 21261870 21262817 + 102003117 AGCD01015411;XM_005380081 XP_005380138 MODEL 10156522 ncrna LOC106147122 uncharacterized LOC106147122 NW_004955520 2327237 2338394 - 106147122 AGCD01068078;GBCB01080155;XR_001231875;XR_001231876 MODEL 39134189 misc_rna 7SK 7SK RNA 8882771 protein-coding Naa50 N-alpha-acetyltransferase 50, NatE catalytic subunit ENCODES a protein that exhibits histone H4 acetyltransferase activity (ortholog); protein-lysine-acetyltransferase activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN establishment of mitotic sister chromatid cohesion (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); N-terminal protein amino acid acetylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) NW_004955427 13845806 13868323 - 102006260 AGCD01027260;GBCQ01007370;XM_005386405;XM_005386406 XP_005386462;XP_005386463 MODEL 8963702 protein-coding LOC102022771 keratin-associated protein 2-1-like NW_004955451 15461320 15485402 - 102022771 AGCD01043609;AGCD01043610;AGCD01043611;GBDF01041876;XM_005394382;XM_005394383;XM_013519178 XP_005394439;XP_005394440;XP_013374632 MODEL 8733791 protein-coding Trpm1 transient receptor potential cation channel subfamily M member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); cellular response to light stimulus (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1C (ortholog); Ependymomas (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955416 29846374 29880922 - 102017234 AGCD01017668;XM_013512689 XP_013368143 MODEL 8806943 protein-coding Fitm2 fat storage inducing transmembrane protein 2 ENCODES a protein that exhibits coenzyme A diphosphatase activity (ortholog); diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); fatty-acyl-CoA catabolic process (ortholog); intracellular triglyceride homeostasis (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); cholangiocarcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955445 13027431 13032089 + 102021400 AGCD01039767;GBDI01219068;XM_005392483 XP_005392540 MODEL 8995288 ncrna LOC102025217 uncharacterized LOC102025217 NW_004955409 3253468 3265102 - 102025217 AGCD01009237;GBDF01078183;XR_259747 MODEL 9024104 pseudo LOC102012006 RWD domain-containing protein 1-like NW_004955502 2548815 2559921 - 102012006 AGCD01064301 MODEL 8774794 pseudo LOC102023500 uncharacterized LOC102023500 NW_004955504 3937192 4025553 + 102023500 AGCD01064876 MODEL 8997286 protein-coding Asf1a anti-silencing function 1A histone chaperone ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); DNA replication-dependent chromatin assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH melanoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955436 1635397 1640989 + 102011241 AGCD01033583;GBCQ01039950;XM_005389126 XP_005389183 MODEL 10381409 ncrna LOC106150062 uncharacterized LOC106150062 NW_004955463 6666855 6685480 - 106150062 AGCD01049689;AGCD01049690;AGCD01049691;XR_001236634 MODEL 8948967 protein-coding Ddx43 DEAD-box helicase 43 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955493 8541937 8578199 + 102022093 AGCD01061309;AGCD01061310;AGCD01061311;AGCD01061312;AGCD01061313;AGCD01061314;GBCE01162665;GBDF01081346;XM_013504889;XM_013504890 XP_013360343;XP_013360344 MODEL 9031080 protein-coding Wdr4 WDR4 tRNA N7-guanosine methyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN tRNA (guanine-N7)-methylation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 39044328 39066277 + 102008697 AGCD01007821;GBCB01087848;XM_005375807;XM_005375808 XP_005375864;XP_005375865 MODEL 8764207 protein-coding LOC102005239 vomeronasal type-1 receptor 4-like NW_004955465 13086650 13087604 + 102005239 AGCD01050584;XM_005398946 XP_005399003 MODEL 8900909 protein-coding Mknk1 MAPK interacting serine/threonine kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway in absence of ligand (ortholog); intracellular signal transduction (ortholog); peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955464 11697946 11750258 + 102016359 AGCD01050161;XM_005398664;XM_005398665;XM_005398666;XM_005398667;XM_005398668;XM_005398669;XM_013521634;XM_013521635;XM_013521636 XP_005398721;XP_005398722;XP_005398723;XP_005398724;XP_005398725;XP_005398726;XP_013377088;XP_013377089;XP_013377090 MODEL 8774436 pseudo LOC102005928 60S ribosomal protein L30-like NW_004955475 4519787 4520219 + 102005928 AGCD01054881;XR_263612 MODEL 8997946 protein-coding Cyth2 cytohesin 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); endosome organization (ortholog); negative regulation of dendrite development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); BLOC-1 complex (ortholog); cell body (ortholog) NW_004955559 2014740 2021234 - 102010101 AGCD01073686;GBDF01002920;XM_013509039;XM_013509040 XP_013364493;XP_013364494 MODEL 8772909 protein-coding Pld5 phospholipase D family member 5 ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 5810286 5994601 - 102027264 AGCD01005742;AGCD01005743;AGCD01005744;GBBH01226778;XM_013520242;XM_013520247 XP_013375696;XP_013375701 MODEL 8915383 protein-coding Sntg2 syntrophin gamma 2 ENCODES a protein that exhibits neuroligin family protein binding (ortholog); PDZ domain binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955487 533719 639056 - 102007345 AGCD01059221;AGCD01059222;AGCD01059223;AGCD01059224;GBDK01266841;XM_005404340;XM_013504329;XM_013504330;XM_013504331;XM_013504332 XP_005404397;XP_013359783;XP_013359784;XP_013359785;XP_013359786 MODEL 9052817 protein-coding LOC102012414 cytochrome P450 4B1 ENCODES a protein that exhibits heterocyclic compound binding (ortholog); medium-chain fatty acid omega-1 hydroxylase activity (ortholog); medium-chain fatty acid omega-hydroxylase activity (ortholog); INVOLVED IN biphenyl metabolic process (ortholog); fatty acid oxidation (ortholog); xenobiotic metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955464 11539467 11556519 - 102012414 AGCD01050155;GBDF01188215;XM_005398649;XM_005398650 XP_005398706;XP_005398707 MODEL 8798244 protein-coding Ndufaf3 NADH:ubiquinone oxidoreductase complex assembly factor 3 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955532 1045854 1046738 + 102007054 AGCD01070164;GBBH01035419;GBDI01069498;XM_013507583 XP_013363037 MODEL 8717841 gene LOC102010841 Ig lambda-2 chain C regions-like NW_004955442 17155684 17169023 - 102010841 AGCD01037943;AGCD01037944;XM_005391686;XM_005391687 MODEL 8956227 protein-coding Naa60 N-alpha-acetyltransferase 60, NatF catalytic subunit ENCODES a protein that exhibits histone H4 acetyltransferase activity (ortholog); protein homodimerization activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); N-terminal peptidyl-methionine acetylation (ortholog); N-terminal protein amino acid acetylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Idiopathic Basal Ganglia Calcification 1 (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955442 13895248 13926152 - 102026576 AGCD01037795;GBDF01126769;XM_005391347;XM_005391348;XM_005391349 XP_005391404;XP_005391405;XP_005391406 MODEL 8906969 protein-coding Fam3c FAM3 metabolism regulating signaling molecule C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN epidermal cell differentiation (ortholog); ERK1 and ERK2 cascade (ortholog); gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955479 3086380 3128612 - 102008099 AGCD01056291;GBDJ01091812;XM_005402315 XP_005402372 MODEL 8786653 protein-coding Fiz1 FLT3 interacting zinc finger 1 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); INVOLVED IN positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955567 746216 751032 + 102023083 AGCD01074430;AGCD01074431;GBDI01242402;XM_013509225 XP_013364679 MODEL 8771674 protein-coding LOC102004902 uncharacterized LOC102004902 NW_004955458 6755891 6789102 + 102004902 AGCD01047568;GBDI01288371;XM_005397527 XP_005397584 MODEL 8982307 protein-coding LOC102007793 solute carrier family 22 member 13 NW_004955427 25740144 25743458 + 102007793 AGCD01027551;GBDF01180895;XM_013515058 XP_013370512 MODEL 8812881 protein-coding LOC102018077 WD repeat-containing protein 87-like NW_004955468 2223885 2241409 - 102018077 AGCD01051804;GBBH01142412;XM_013522301;XM_013522302;XM_013522303 XP_013377755;XP_013377756;XP_013377757 MODEL 8800067 protein-coding Iqcf3 IQ motif containing F3 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog) NW_004955532 3493451 3494864 + 102020840 AGCD01070285;GBDF01001012;XM_005410325 XP_005410382 MODEL 8820426 protein-coding CUNH16orf78 chromosome unknown C16orf78 homolog ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955433 7603234 7620319 + 102012466 AGCD01031574;GBDF01082318;XM_005388257 XP_005388314 MODEL 9020789 protein-coding Gpbar1 G protein-coupled bile acid receptor 1 ENCODES a protein that exhibits G protein-coupled bile acid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway (ortholog); cellular response to bile acid (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955453 15109711 15112438 - 102014529 AGCD01044885;GBDJ01061681;XM_005395661 XP_005395718 MODEL 8951352 ncrna LOC102008894 uncharacterized LOC102008894 NW_004955545 2826658 2829716 + 102008894 AGCD01071923;GBDF01218328;XR_264881 MODEL 39132349 snrna U6 U6 spliceosomal RNA 8837215 protein-coding Csn3 casein kappa INVOLVED IN lactation (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN extracellular region (ortholog) NW_004955447 2616337 2623845 - 102026813 AGCD01040548;GBDJ01241159;XM_013518493 XP_013373947 MODEL 10291934 ncrna LOC106149272 uncharacterized LOC106149272 NW_004955441 7415580 7418445 + 106149272 AGCD01036963;GBBH01054658;XR_001235341 MODEL 39131724 rrna 5S_rRNA 5S ribosomal RNA 10286406 ncrna LOC106147123 uncharacterized LOC106147123 NW_004955520 2813505 2836089 - 106147123 AGCD01068083;XR_001231881;XR_001231882 MODEL 39134190 misc_rna 7SK 7SK RNA 8935083 protein-coding Pter phosphotriesterase related ENCODES a protein that exhibits N-acetyltaurine hydrolase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); regulation of appetite (ortholog); taurine metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955429 11296833 11356082 - 102030449 AGCD01028686;AGCD01028687;GBDK01220368;XM_005386971;XM_013515555;XM_013515556;XM_013515557 XP_005387028;XP_013371009;XP_013371010;XP_013371011 MODEL 8948004 protein-coding Kif19 kinesin family member 19 ENCODES a protein that exhibits plus-end-directed microtubule motor activity (ortholog); INVOLVED IN axonemal microtubule depolymerization (ortholog); plus-end specific microtubule depolymerization (ortholog); ASSOCIATED WITH Hydrops Fetalis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cilium (ortholog) NW_004955553 1219462 1247161 + 102007281 AGCD01072873;GBDF01178770;XM_005412230;XM_013508634;XM_013508635 XP_005412287;XP_013364088;XP_013364089 MODEL 8853998 protein-coding LOC102024510 zinc finger protein 709-like NW_004955546 400816 405424 - 102024510 AGCD01071973;XM_013508420 XP_013363874 MODEL 8838746 protein-coding Bivm basic, immunoglobulin-like variable motif containing FOUND IN nucleoplasm (ortholog) NW_004955404 8327295 8358453 - 102028925 AGCD01003350;AGCD01003351;GBDI01324218;XM_005374026;XM_005374027;XM_013515915 XP_005374083;XP_005374084;XP_013371369 MODEL 8869925 pseudo LOC102022777 pre-mRNA-splicing factor SLU7 pseudogene NW_004955405 19431948 19434013 - 102022777 AGCD01005035 MODEL 9062973 ncrna LOC102012008 uncharacterized LOC102012008 NW_004955506 888972 890923 + 102012008 AGCD01065239;GBDF01266491;XR_264312 MODEL 8928511 protein-coding Baiap3 BAI1 associated protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); phospholipid binding (ortholog); SNARE binding (ortholog); INVOLVED IN dense core granule maturation (ortholog); G protein-coupled receptor signaling pathway (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); dense core granule (ortholog); early endosome membrane (ortholog) NW_004955442 15884034 15897894 - 102006961 AGCD01037884;GBDI01166935;XM_005391574;XM_013517830 XP_005391631;XP_013373284 MODEL 8984416 protein-coding LOC102006285 vegetative cell wall protein gp1-like NW_004955546 1258104 1261505 - 102006285 AGCD01072044;GBDF01260251;XM_005411765;XM_005411766 XP_005411822;XP_005411823 MODEL 8806966 pseudo LOC102023146 protein tilB homolog pseudogene NW_004955474 11766720 11768370 - 102023146 AGCD01054636 MODEL 8703767 protein-coding LOC102010843 kallikrein-2-like NW_004955559 416199 433647 - 102010843 AGCD01073584;AGCD01073585;AGCD01073586;GBDJ01062263;GBDJ01062266;XM_005412758 XP_005412815 MODEL 9004312 protein-coding Mustn1 musculoskeletal, embryonic nuclear protein 1 INVOLVED IN embryonic limb morphogenesis (ortholog); glucose homeostasis (ortholog); positive regulation of chondrocyte differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 2790090 2793880 - 102026899 AGCD01029181;GBDI01008471;XM_005387355 XP_005387412 MODEL 8779096 pseudo LOC102007433 olfactory receptor 2T10-like NW_004955418 29702702 29708070 - 102007433 AGCD01019480 MODEL 10211853 protein-coding LOC106150063 uncharacterized LOC106150063 NW_004955463 13159649 13333530 - 106150063 AGCD01049862;AGCD01049863;AGCD01049864;GBDI01086240;XM_013521499;XR_001236635;XR_001236636 XP_013376953 MODEL 39134497 misc_rna 7SK 7SK RNA 9032422 protein-coding Glp1r glucagon like peptide 1 receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); glucagon-like peptide 1 receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); associative learning (ortholog); cAMP/PKA signal transduction (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); disease of cellular proliferation (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 4394088 4418172 - 102014490 AGCD01034364;GBDF01060219;GBDK01408238;XM_013517124;XR_001235111 XP_013372578 MODEL 8850709 protein-coding Hnrnpc heterogeneous nuclear ribonucleoprotein C ENCODES a protein that exhibits deaminase binding (ortholog); enzyme inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of mRNA modification (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); atherosclerosis (ortholog); autosomal dominant intellectual developmental disorder 74 (ortholog); FOUND IN actin cytoskeleton (ortholog); catalytic step 2 spliceosome (ortholog); cytosol (ortholog) NW_004955550 1949975 2002297 - 102009885 AGCD01072599;AGCD01072600;GBBH01001827;XM_005412104;XM_005412105;XM_005412106;XM_013508584 XP_005412161;XP_005412162;XP_005412163;XP_013364038 MODEL 9062004 protein-coding Ddx46 DEAD-box helicase 46 INVOLVED IN mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear speck (ortholog); U2-type spliceosomal complex (ortholog) NW_004955408 29981509 30031473 + 102006001 AGCD01008791;AGCD01008792;GBDF01118769;XM_005376463;XM_005376464;XM_005376465 XP_005376520;XP_005376521;XP_005376522 MODEL 8931821 protein-coding Hells helicase, lymphoid specific ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); chromatin binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); chromatin remodeling (ortholog); chromosomal DNA methylation maintenance following DNA replication (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); nucleus (ortholog) NW_004955507 995389 1034852 + 102005066 AGCD01065498;AGCD01065499;AGCD01065500;GBDJ01031800;XM_005407530;XM_013506206 XP_005407587;XP_013361660 MODEL 8726943 pseudo LOC102021437 E3 SUMO-protein ligase PIAS2 pseudogene NW_004955415 14409004 14410892 - 102021437 AGCD01016298 MODEL 39131725 rrna 5S_rRNA 5S ribosomal RNA 8989529 protein-coding Iqcf6 IQ motif containing F6 NW_004955532 3363575 3364276 - 102019199 AGCD01070279;GBDF01001665;XM_005410322 XP_005410379 MODEL 8876819 protein-coding LOC102025218 leishmanolysin-like NW_004955409 37199857 37203329 + 102025218 AGCD01010498;GBDF01254756;XM_005377093;XM_005377094 XP_005377150;XP_005377151 MODEL 39132392 rrna 5S_rRNA 5S ribosomal RNA 8963119 ncrna LOC102003499 uncharacterized LOC102003499 NW_004955446 7604429 7625603 + 102003499 AGCD01040126;GBDF01002983;XR_262378;XR_262379 MODEL 8820675 protein-coding Sntn sentan, cilia apical structure protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cilium (ortholog) NW_004955517 2210700 2233760 - 102023184 AGCD01067619;AGCD01067620;AGCD01067621;AGCD01067622;GBBH01031963;XM_013506948 XP_013362402 MODEL 8958557 ncrna LOC102013525 uncharacterized LOC102013525 NW_004955505 4680056 4680662 + 102013525 AGCD01065126;GBDF01224478;XR_264309 MODEL 8934945 pseudo LOC102023506 transcription factor SPT20 homolog pseudogene NW_004955509 4726423 4729593 + 102023506 AGCD01066087;AGCD01066088;XM_005407860 MODEL 8739446 protein-coding Asf1b anti-silencing function 1B histone chaperone ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); DNA replication-dependent chromatin assembly (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); castration-resistant prostate carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 32818592 32828651 - 102011307 AGCD01016735;GBDF01005758;XM_005381087 XP_005381144 MODEL 8865060 protein-coding Wdr41 WD repeat domain 41 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); guanyl-nucleotide exchange factor complex (ortholog) NW_004955425 23366130 23510897 + 102016494 AGCD01025845;AGCD01025846;GBDF01088944;XM_005386025;XM_013514857 XP_005386082;XP_013370311 MODEL 8781163 protein-coding LOC102003118 olfactory receptor 2AG1-like NW_004955414 22492961 22493908 - 102003118 AGCD01015459;XM_005380176 XP_005380233 MODEL 8886991 ncrna LOC102005243 uncharacterized LOC102005243 NW_004955467 11763835 11774999 + 102005243 AGCD01051617;GBDF01234200;XR_263363 MODEL 8716542 ncrna LOC102004903 uncharacterized LOC102004903 NW_004955409 9055420 9070182 + 102004903 AGCD01009428;AGCD01009429;AGCD01009430;GBDF01194507;XR_259760 MODEL 8840649 ncrna LOC102007794 uncharacterized LOC102007794 NW_004955506 4248624 4261163 - 102007794 AGCD01065330;GBDI01281509;XR_264348 MODEL 8913957 pseudo LOC102005933 LYR motif-containing protein 2 pseudogene NW_004955418 22822234 22822422 + 102005933 AGCD01019292 MODEL 8832984 protein-coding Gpbp1 GC-rich promoter binding protein 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955446 10685476 10741375 - 102011374 AGCD01040185;GBDJ01075106;GBDK01084172;XM_013518445 XP_013373899 MODEL 9037534 protein-coding LOC102010058 galectin-5-like NW_004955481 5603002 5609837 - 102010058 AGCD01056998;GBDI01345788;XM_005402926 XP_005402983 MODEL 8774690 protein-coding Mknk2 MAPK interacting serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); hemopoiesis (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog) NW_004955495 6048346 6061579 + 102021684 AGCD01062048;GBDJ01009214;XM_005405932;XM_005405934 XP_005405989;XP_005405991 MODEL 8831905 protein-coding Setd5 SET domain containing 5 ENCODES a protein that exhibits histone H3 methyltransferase activity (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); INVOLVED IN cognition (ortholog); negative regulation of transcription by RNA polymerase III (ortholog); regulation of chromatin organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); ankyloglossia (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); euchromatin (ortholog) NW_004955561 968814 1091687 + 102029235 AGCD01073827;AGCD01073828;AGCD01073829;AGCD01073830;AGCD01073831;GBDJ01090978;XM_005413006;XM_005413007;XM_005413008;XM_005413009;XM_005413010;XM_005413012;XM_005413013;XM_005413014;XM_005413015;XM_013509075;XM_013509076;XM_013509077;XM_013509078 XP_005413063;XP_005413064;XP_005413065;XP_005413066;XP_005413067;XP_005413069;XP_005413070;XP_005413071;XP_005413072;XP_013364529;XP_013364530;XP_013364531;XP_013364532 MODEL 8943443 protein-coding Cyth3 cytohesin 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); Golgi vesicle transport (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955460 13439634 13492767 + 102023121 AGCD01048688;AGCD01048689;AGCD01048690;AGCD01048691;GBDF01181556;XM_013521212 XP_013376666 MODEL 8724977 protein-coding Gad1 glutamate decarboxylase 1 ENCODES a protein that exhibits glutamate binding (ortholog); glutamate decarboxylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to hyperoxia (ortholog); cellular response to hypoxia (ortholog); cellular response to serotonin (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; beta-alanine metabolic pathway; Canavan disease pathway; ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell cortex (ortholog) NW_004955449 3964006 4001850 - 102022653 AGCD01041872;GBDF01110754;XM_005393242 XP_005393299 MODEL 8873342 protein-coding Trpm2 transient receptor potential cation channel subfamily M member 2 ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); calcium ion binding (ortholog); hydrolase activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); lysosomal membrane (ortholog) NW_004955407 41062217 41110500 - 102025656 AGCD01007854;AGCD01007855;GBBH01060494;GBBH01060499;XM_005375860;XM_005375861;XM_013505319;XM_013505324;XM_013505330;XM_013505335 XP_005375917;XP_005375918;XP_013360773;XP_013360778;XP_013360784;XP_013360789 MODEL 8819241 protein-coding Numa1 nuclear mitotic apparatus protein 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); dynein complex binding (ortholog); microtubule binding (ortholog); INVOLVED IN anastral spindle assembly (ortholog); astral microtubule organization (ortholog); establishment of mitotic spindle orientation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955414 19252191 19327504 + 102003116 AGCD01015308;AGCD01015309;AGCD01015310;AGCD01015311;AGCD01015312;GBDF01088773;XM_005380008;XM_005380010;XM_005380011;XM_005380013;XM_005380014;XM_013511818 XP_005380065;XP_005380067;XP_005380068;XP_005380070;XP_005380071;XP_013367272 MODEL 8935413 protein-coding Ndufaf4 NADH:ubiquinone oxidoreductase complex assembly factor 4 INVOLVED IN defense response to virus (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); NADH dehydrogenase complex assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955411 22878031 22882723 - 102019785 AGCD01012099;GBDI01324089;XM_005377790 XP_005377847 MODEL 8852726 protein-coding Ptf1a pancreas associated transcription factor 1a ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cell differentiation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH cerebellar disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955429 5807804 5809522 - 102011348 AGCD01028536;AGCD01028537;GBDF01208599;XM_005387232 XP_005387289 MODEL 39132395 rrna 5S_rRNA 5S ribosomal RNA 8737845 protein-coding Naa80 N-alpha-acetyltransferase 80, NatH catalytic subunit ENCODES a protein that exhibits acetyl-CoA binding (ortholog); N-acetyltransferase activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN actin modification (ortholog); N-terminal peptidyl-aspartic acid acetylation (ortholog); N-terminal peptidyl-glutamic acid acetylation (ortholog); ASSOCIATED WITH AURONEURODENTAL SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955532 2109595 2112013 - 102027899 AGCD01070217;GBCE01137626;XM_005410252 XP_005410309 MODEL 8832916 protein-coding Fjx1 four-jointed box kinase 1 INVOLVED IN retina layer formation (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 10731004 10733522 - 102010064 AGCD01022743;AGCD01022744;GBBH01208613;XM_005384948 XP_005385005 MODEL 8806691 protein-coding Kif1a kinesin family member 1A ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde dendritic transport (ortholog); anterograde neuronal dense core vesicle transport (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); amblyopia (ortholog); asthma (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955542 756834 832805 + 102014171 AGCD01071480;AGCD01071481;GBCB01099302;XM_005411149;XM_005411150;XM_005411151;XM_005411152;XM_013508118;XM_013508119;XM_013508120;XM_013508121;XM_013508122;XM_013508124;XM_013508125 XP_005411206;XP_005411207;XP_005411208;XP_005411209;XP_013363572;XP_013363573;XP_013363574;XP_013363575;XP_013363576;XP_013363578;XP_013363579 MODEL 8745125 protein-coding LOC102023147 zinc finger X-linked protein ZXDB NW_004955475 3824048 3826106 + 102023147 AGCD01054856;GBBH01186410;XM_005401702 XP_005401759 MODEL 8915414 ncrna LOC102010844 uncharacterized LOC102010844 NW_004955443 5803759 5817261 + 102010844 AGCD01038244;GBBH01211346;XR_262178 MODEL 9003977 protein-coding LOC102013527 olfactory receptor 5AK2-like NW_004955511 2117904 2118839 + 102013527 AGCD01066392;XM_005407984 XP_005408041 MODEL 39134498 misc_rna 7SK 7SK RNA 10369642 ncrna LOC106149273 uncharacterized LOC106149273 NW_004955441 14024288 14077782 - 106149273 AGCD01037169;AGCD01037170;AGCD01037171;AGCD01037172;GBCE01023126;XR_001235342;XR_001235343;XR_001235344 MODEL 8822208 protein-coding CUNH16orf86 chromosome unknown C16orf86 homolog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955484 9013743 9015836 - 102025688 AGCD01058403;GBDF01045501;XM_013503956;XM_013503957;XM_013503958 XP_013359410;XP_013359411;XP_013359412 MODEL 39134191 misc_rna 7SK 7SK RNA 9061346 ncrna LOC102004904 uncharacterized LOC102004904 NW_004955409 15374756 15399313 - 102004904 AGCD01009675;AGCD01009676;GBDF01210918;XR_259784 MODEL 8888481 protein-coding Pld6 phospholipase D family member 6 ENCODES a protein that exhibits cardiolipin phospholipase D activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); mitochondrial fusion (ortholog); P granule organization (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH male infertility (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN Golgi apparatus (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955577 698741 702977 + 102025634 AGCD01075411;AGCD01075412;GBCB01110589;XM_013509636 XP_013365090 MODEL 8963134 protein-coding Hnrnpd heterogeneous nuclear ribonucleoprotein D ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); minor groove of adenine-thymine-rich DNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); mCRD-mediated mRNA stability complex (ortholog) NW_004955433 6452931 6470209 - 102004417 AGCD01031538;AGCD01031539;GBBH01085931;GBDF01046957;XM_005388237;XM_005388238 XP_005388294;XP_005388295 MODEL 10190575 ncrna LOC106147124 uncharacterized LOC106147124 NW_004955520 2824557 2825296 - 106147124 AGCD01068083;XR_001231883 MODEL 8819082 protein-coding LOC102024511 disintegrin and metalloproteinase domain-containing protein 20 NW_004955552 2217959 2237548 - 102024511 AGCD01072806;GBDF01081593;XM_005412207;XM_005412208;XM_005412209 XP_005412264;XP_005412265;XP_005412266 MODEL 9024430 protein-coding Bkgd beta-keto-L-gulonate decarboxylase ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); zinc ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); regulation of DNA repair (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955414 780009 809016 - 102023894 AGCD01014746;AGCD01014747;AGCD01014748;AGCD01014749;GBCQ01000810;XM_005379702;XM_005379703;XM_005379704;XM_013511833 XP_005379759;XP_005379760;XP_005379761;XP_013367287 MODEL 8822192 pseudo LOC102025222 luc7-like protein 3 NW_004955411 35479981 35483380 - 102025222 AGCD01012433 MODEL 8836659 protein-coding LOC102012009 ferritin-1 heavy chain-like NW_004955427 216126 219395 - 102012009 AGCD01026814;XM_005386602 XP_005386659 MODEL 8940625 protein-coding Iqcg IQ motif containing G ENCODES a protein that exhibits calmodulin binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN sperm axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); manchette (ortholog) NW_004955420 11960778 11997807 + 102028971 AGCD01020848;AGCD01020849;GBDF01049203;XM_005383090;XM_013513363;XM_013513364;XM_013513365 XP_005383147;XP_013368817;XP_013368818;XP_013368819 MODEL 8980668 pseudo LOC102006293 protein kinase C iota type pseudogene NW_004955443 17422253 17426023 + 102006293 AGCD01038579 MODEL 10191111 pseudo LOC102018079 Ig heavy chain V-I region 5-like NW_004955470 851205 851707 - 102018079 AGCD01052624 MODEL 8764255 pseudo LOC102008895 60S ribosomal protein L26-like NW_004955441 12522219 12523098 + 102008895 AGCD01037123 MODEL 8993860 protein-coding Mutyh mutY DNA glycosylase ENCODES a protein that exhibits DNA N-glycosylase activity (ortholog); MutLalpha complex binding (ortholog); MutLbeta complex binding (ortholog); INVOLVED IN negative regulation of necroptotic process (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Ataxia (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955464 12927669 12936894 + 102029162 AGCD01050240;GBDI01178767;XM_005398706;XM_013521656;XM_013521657;XM_013521658;XM_013521659;XM_013521660 XP_005398763;XP_013377110;XP_013377111;XP_013377112;XP_013377113;XP_013377114 MODEL 8903690 protein-coding Snu13 small nuclear ribonucleoprotein 13 ENCODES a protein that exhibits ATPase binding (ortholog); box C/D sno(s)RNA binding (ortholog); snoRNA binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); mRNA splicing, via spliceosome (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); dense fibrillar component (ortholog); nucleolus (ortholog) NW_004955413 27160985 27172648 - 102023018 AGCD01014496;AGCD01014497;GBDF01002032;XM_005379365 XP_005379422 MODEL 8783901 protein-coding Csnk1a1 casein kinase 1 alpha 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); peptide binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to nutrient (ortholog); Golgi organization (ortholog); PARTICIPATES IN dopamine signaling pathway; Hedgehog signaling pathway; p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); FOUND IN beta-catenin destruction complex (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955415 4921356 4966705 + 102023026 AGCD01015989;GBDF01000195;XM_005380602;XM_005380603;XM_005380604;XM_013512278;XM_013512279 XP_005380659;XP_005380660;XP_005380661;XP_013367732;XP_013367733 MODEL 8849034 pseudo LOC102012421 5-azacytidine-induced protein 2 pseudogene NW_004955414 22550353 22553184 + 102012421 AGCD01015461 MODEL 8872215 protein-coding Wdr43 WD repeat domain 43 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); transcription elongation factor activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); regulation of stem cell population maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955469 10777332 10835577 + 102016256 AGCD01052550;AGCD01052551;GBDF01226152;XM_005400538;XM_005400539 XP_005400595;XP_005400596 MODEL 9021155 protein-coding Glp2r glucagon like peptide 2 receptor ENCODES a protein that exhibits glucagon receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955467 7239547 7308809 - 102006013 AGCD01051431;AGCD01051432;AGCD01051433;GBDI01235201;XM_013522035 XP_013377489 MODEL 8860011 pseudo LOC102007795 zinc finger FYVE domain-containing protein 1 pseudogene NW_004955429 6957166 6968391 + 102007795 AGCD01028571;AGCD01028572 MODEL 8830285 protein-coding Gpbp1l1 GC-rich promoter binding protein 1 like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955464 12601373 12659687 + 102025987 AGCD01050210;AGCD01050211;AGCD01050212;AGCD01050213;AGCD01050214;GBDJ01275632;XM_005398693;XM_013521584;XM_013521585 XP_005398750;XP_013377038;XP_013377039 MODEL 8842654 protein-coding LOC102021446 olfactory receptor 6F1 NW_004955418 30343310 30344236 - 102021446 AGCD01019514;XM_005382336 XP_005382393 MODEL 8865523 protein-coding LOC102005934 olfactory receptor 1L3-like NW_004955419 5269472 5270444 - 102005934 AGCD01019797;XM_013513102 XP_013368556 MODEL 8785749 protein-coding Csnk1d casein kinase 1 delta ENCODES a protein that exhibits kinase activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); circadian regulation of gene expression (ortholog); Golgi organization (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; ribosome biogenesis pathway; ASSOCIATED WITH advanced sleep phase syndrome 1 (ortholog); advanced sleep phase syndrome 2 (ortholog); Alzheimer's disease (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955506 904659 936293 + 102013853 AGCD01065240;AGCD01065241;GBDF01002630;XM_005407211;XM_005407212;XR_264318 XP_005407268;XP_005407269 MODEL 8961691 protein-coding Fam3d FAM3 metabolism regulating signaling molecule D INVOLVED IN antimicrobial peptide biosynthetic process (ortholog); aorta development (ortholog); epithelial cell proliferation (ortholog); ASSOCIATED WITH schizophrenia (ortholog); stomach cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955430 1541896 1569391 + 102004304 AGCD01029127;GBDI01020764;XM_005387278;XM_005387279;XM_005387280;XM_005387281;XM_005387282;XM_005387283 XP_005387335;XP_005387336;XP_005387337;XP_005387338;XP_005387339;XP_005387340 MODEL 9013067 protein-coding Cyth4 cytohesin 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 23745797 23774397 + 102030173 AGCD01014335;GBCE01075881;XM_005379197 XP_005379254 MODEL 9017579 protein-coding Bak1 BCL2 antagonist/killer 1 ENCODES a protein that exhibits BH domain binding (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); apoptotic process (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); ataxia telangiectasia (ortholog); FOUND IN BAK complex (ortholog); Bcl-2 family protein complex (ortholog); cytoplasm (ortholog) NW_004955437 2036415 2041997 - 102008887 AGCD01034255;GBBH01062496;XM_005389504;XM_005389505 XP_005389561;XP_005389562 MODEL 8802362 pseudo LOC102023508 olfactory receptor 5M10-like NW_004955511 1696693 1697564 + 102023508 AGCD01066377 MODEL 8835937 protein-coding Asgr1 asialoglycoprotein receptor 1 ENCODES a protein that exhibits asialoglycoprotein receptor activity (ortholog); identical protein binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN receptor-mediated endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955467 9728918 9732548 + 102003641 AGCD01051522;GBDI01306066;XM_005399560 XP_005399617 MODEL 10116232 ncrna LOC106150064 uncharacterized LOC106150064 NW_004955463 5507350 5558745 - 106150064 AGCD01049639;AGCD01049640;GBBH01168928;XR_001236639;XR_001236640;XR_001236641 MODEL 8747882 protein-coding Trpm3 transient receptor potential cation channel subfamily M member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); monoatomic cation transport (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955434 2017809 2543827 + 102022219 AGCD01032082;AGCD01032083;AGCD01032084;AGCD01032085;AGCD01032086;AGCD01032087;AGCD01032088;AGCD01032089;AGCD01032090;AGCD01032091;AGCD01032092;AGCD01032093;AGCD01032094;AGCD01032095;AGCD01032096;AGCD01032097;GBDK01308805;XM_005388528;XM_005388530;XM_005388531;XM_005388535;XM_005388536;XM_005388541;XM_005388542;XM_005388548;XM_005388550;XM_005388552 XP_005388585;XP_005388587;XP_005388588;XP_005388592;XP_005388593;XP_005388598;XP_005388599;XP_005388605;XP_005388607;XP_005388609 MODEL 8951421 protein-coding Ptgdr prostaglandin D2 receptor ENCODES a protein that exhibits prostaglandin D receptor activity (ortholog); prostaglandin J receptor activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); cellular response to prostaglandin D stimulus (ortholog); inflammatory response (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin D2 signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955409 10801370 10810161 - 102011282 AGCD01009485;GBDK01397856;XM_005376785 XP_005376842 MODEL 9005382 ncrna LOC102005245 uncharacterized LOC102005245 NW_004955468 5664674 5675915 + 102005245 AGCD01051973;GBDF01154207;XR_001236889;XR_263388;XR_263389;XR_263390 MODEL 8848731 protein-coding Helq helicase, POLQ like ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); single-stranded 3'-5' DNA helicase activity (ortholog); INVOLVED IN DNA double-strand break processing involved in repair via single-strand annealing (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955474 6280955 6322702 + 102028411 AGCD01054467;AGCD01054468;AGCD01054469;AGCD01054470;AGCD01054471;GBDF01119561;XM_005401382;XM_005401384;XM_013502753;XM_013502754;XM_013502755;XR_001230734 XP_005401439;XP_005401441;XP_013358207;XP_013358208;XP_013358209 MODEL 8963469 protein-coding CUNH16orf87 chromosome unknown C16orf87 homolog ASSOCIATED WITH melanoma (ortholog); pancreatic adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955448 333903 366598 - 102015256 AGCD01041229;AGCD01041230;GBBH01180476;GBCE01138509;XM_013518584 XP_013374038 MODEL 8716427 pseudo LOC102022779 U6 snRNA-associated Sm-like protein LSm6 pseudogene NW_004955405 17212899 17223254 + 102022779 AGCD01004987 MODEL 8742749 protein-coding LOC102006296 zinc finger protein 709-like NW_004955569 1353747 1371972 - 102006296 AGCD01074650;AGCD01074651;GBCE01006118;XM_005413500 XP_005413557 MODEL 8963868 protein-coding LOC102004907 speedy protein E4-like NW_004955460 10750151 10756120 + 102004907 AGCD01048604;GBDF01286262;XM_005397847;XM_013521141 XP_005397904;XP_013376595 MODEL 39134192 misc_rna 7SK 7SK RNA 8881077 ncrna LOC102003500 uncharacterized LOC102003500 NW_004955575 638720 645615 + 102003500 AGCD01075227;GBDK01352758;XR_265069 MODEL 10157393 ncrna LOC106149274 uncharacterized LOC106149274 NW_004955441 9743247 9750318 + 106149274 AGCD01037029;AGCD01037030;GBDF01305348;XR_001235348 MODEL 8875416 protein-coding Mkrn1 makorin ring finger protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955494 2847783 2871095 + 102008327 AGCD01061452;GBDF01011001;XM_013504989;XM_013504990 XP_013360443;XP_013360444 MODEL 8837505 protein-coding Setd6 SET domain containing 6, protein lysine methyltransferase ENCODES a protein that exhibits NF-kappaB binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN peptidyl-lysine monomethylation (ortholog); regulation of inflammatory response (ortholog); stem cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 15934091 15937738 + 102012677 AGCD01031777;GBBH01050346;GBCQ01063968;XM_005388507 XP_005388564 MODEL 8767658 pseudo LOC102007434 eukaryotic translation initiation factor 1 pseudogene NW_004955419 15211183 15211577 - 102007434 AGCD01020066 MODEL 10264996 ncrna LOC106147125 uncharacterized LOC106147125 NW_004955520 3906728 3919054 - 106147125 AGCD01068113;GBDF01040809;XR_001231884 MODEL 9028552 protein-coding Numb NUMB endocytic adaptor protein ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); forebrain development (ortholog); PARTICIPATES IN altered Notch signaling pathway; altered Notch signaling pathway involving the macromolecules modifying the main players; Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); clathrin-coated pit (ortholog) NW_004955523 2025652 2076037 + 102028330 AGCD01068554;AGCD01068555;GBCB01076515;XM_005409425;XM_013507159;XM_013507160 XP_005409482;XP_013362613;XP_013362614 MODEL 8827830 protein-coding Ndufaf5 NADH:ubiquinone oxidoreductase complex assembly factor 5 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN matrix side of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955415 23221084 23263548 + 102003535 AGCD01016552;GBDF01053633;XM_005380887;XM_013512337;XM_013512338;XR_001233234 XP_005380944;XP_013367791;XP_013367792 MODEL 8759353 pseudo LOC102024514 small nuclear ribonucleoprotein Sm D2 pseudogene NW_004955560 616311 619707 + 102024514 AGCD01073733;XM_005412991 MODEL 39132397 rrna 5S_rRNA 5S ribosomal RNA 8856862 protein-coding LOC102010846 olfactory receptor 2W1-like NW_004955576 1239098 1240057 - 102010846 AGCD01075364;XM_005413951 XP_005414008 MODEL 39134499 misc_rna 7SK 7SK RNA 8817573 protein-coding Iqch IQ motif containing H INVOLVED IN gene expression (ortholog); lncRNA transcription (ortholog); single fertilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog) NW_004955450 8496190 8694810 - 102025640 AGCD01042566;AGCD01042567;AGCD01042568;AGCD01042569;AGCD01042570;AGCD01042571;AGCD01042572;AGCD01042573;AGCD01042574;AGCD01042575;GBBH01073913;XM_013518930;XM_013518931 XP_013374384;XP_013374385 MODEL 8929995 protein-coding LOC102010059 olfactory receptor 2M5-like NW_004955418 30041497 30084803 - 102010059 AGCD01019499;AGCD01019500;AGCD01019501;AGCD01019502;AGCD01019503;XM_013512879 XP_013368333 MODEL 8925038 protein-coding Ddx47 DEAD-box helicase 47 INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); RNA splicing (ortholog); rRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955413 9703777 9718802 + 102019492 AGCD01013910;GBDK01136315;XM_005378972 XP_005379029 MODEL 39131726 rrna 5S_rRNA 5S ribosomal RNA 8753505 protein-coding LOC102013528 olfactory receptor 8I2 NW_004955511 1030944 1031876 + 102013528 AGCD01066354;XM_005408222 XP_005408279 MODEL 8847745 protein-coding Snupn snurportin 1 INVOLVED IN cytoskeleton organization (ortholog); protein complex oligomerization (ortholog); protein tetramerization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 29 (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NLS-dependent protein nuclear import complex (ortholog) NW_004955450 2701496 2720971 + 102026376 AGCD01042395;AGCD01042396;AGCD01042397;AGCD01042398;GBDF01083761;XM_005393503;XM_005393504;XM_013519045 XP_005393560;XP_005393561;XP_013374499 MODEL 8842222 protein-coding Gad2 glutamate decarboxylase 2 ENCODES a protein that exhibits glutamate binding (ortholog); glutamate decarboxylase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to hypoxia (ortholog); GABA shunt (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); GABA-ergic synapse (ortholog) NW_004955429 3092977 3170128 - 102006152 AGCD01028458;AGCD01028459;XM_005386895 XP_005386952 MODEL 8876239 protein-coding LOC102005247 apolipoprotein L6-like NW_004955413 21930891 21954562 + 102005247 AGCD01014275;AGCD01014276;AGCD01014277;GBDJ01276595;XM_005379645 XP_005379702 MODEL 39132350 snrna U6 U6 spliceosomal RNA 8708318 protein-coding Hnrnpdl heterogeneous nuclear ribonucleoprotein D like ENCODES a protein that exhibits double-stranded DNA binding (ortholog); poly(A) binding (ortholog); poly(G) binding (ortholog); INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant limb-girdle muscular dystrophy type 3 (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 6515509 6522081 - 102006156 AGCD01031539;GBBH01000726;XM_005388241 XP_005388298 MODEL 8811891 pseudo LOC102005936 tyrosine-protein phosphatase non-receptor type 2-like NW_004955483 1097670 1098910 - 102005936 AGCD01057640 MODEL 8775706 ncrna LOC102012010 uncharacterized LOC102012010 NW_004955506 6455233 6469865 - 102012010 AGCD01065423;AGCD01065424;AGCD01065425;AGCD01065426;GBDF01119360;XR_264363 MODEL 9034745 protein-coding Plec plectin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ankyrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actomyosin contractile ring assembly actin filament organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basal plasma membrane (ortholog) NW_004955454 2583138 2644308 - 102016445 AGCD01045025;AGCD01045026;GBCE01030252;XM_005395823;XM_005395824;XM_005395825;XM_005395826;XM_005395827;XM_005395828;XM_005395829;XM_005395830;XM_005395832;XM_013520104 XP_005395880;XP_005395881;XP_005395882;XP_005395883;XP_005395884;XP_005395885;XP_005395886;XP_005395887;XP_005395889;XP_013375558 MODEL 8757275 pseudo LOC102003119 ATP-binding cassette sub-family G member 2 pseudogene NW_004955470 8863858 8865469 + 102003119 AGCD01052834 MODEL 39131531 protein-coding FJX1 four-jointed box kinase 1 8983667 protein-coding Naaa N-acylethanolamine acid amidase ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); fatty acid amide hydrolase activity (ortholog); hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); membrane (ortholog) NW_004955433 630627 674675 - 102004193 AGCD01031331;AGCD01031332;GBBH01144194;GBDI01025602;XM_013516247;XM_013516248;XM_013516249;XM_013516250;XM_013516251;XR_001234753 XP_013371701;XP_013371702;XP_013371703;XP_013371704;XP_013371705 MODEL 8832687 protein-coding Mvb12a multivesicular body subunit 12A ENCODES a protein that exhibits lipid binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); ESCRT I complex (ortholog) NW_004955524 839328 842160 - 102026464 AGCD01068715;AGCD01068716;AGCD01068717;GBBH01001625;GBDJ01001657;XM_013507328 XP_013362782 MODEL 9068178 pseudo LOC102018080 olfactory receptor 51F2-like NW_004955414 20321335 20322268 + 102018080 AGCD01015368 MODEL 8966172 protein-coding Csnk1e casein kinase 1 epsilon ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to nerve growth factor stimulus (ortholog); circadian behavior (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; ribosome biogenesis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); colon cancer (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); neuronal cell body (ortholog) NW_004955413 24560889 24591669 - 102016909 AGCD01014371;AGCD01014372;GBCB01042084;XM_005379247;XM_005379248;XM_005379250;XM_005379252;XM_013511621;XM_013511622 XP_005379304;XP_005379305;XP_005379307;XP_005379309;XP_013367075;XP_013367076 MODEL 8757357 ncrna LOC102008896 uncharacterized LOC102008896 NW_004955547 2750784 2754477 + 102008896 AGCD01072294;GBBH01190398;XR_001232234;XR_001232235;XR_264910 MODEL 8800539 protein-coding Ash1l ASH1 like histone lysine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); INVOLVED IN decidualization (ortholog); flagellated sperm motility (ortholog); negative regulation of acute inflammatory response (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Anorectal Malformations (ortholog); anxiety disorder (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 1778905 1950656 - 102010735 AGCD01071870;AGCD01071871;AGCD01071872;AGCD01071873;AGCD01071874;AGCD01071875;AGCD01071876;GBDJ01187710;XM_013508234;XM_013508235;XM_013508236 XP_013363688;XP_013363689;XP_013363690 MODEL 9032398 ncrna LOC102012422 uncharacterized LOC102012422 NW_004955474 1783853 1789261 + 102012422 AGCD01054268;GBDK01242651;XR_263587 MODEL 9014812 protein-coding Ptgdr2 prostaglandin D2 receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); prostaglandin binding (ortholog); prostaglandin D receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); chemotaxis (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic asthma (ortholog) NW_004955511 5536602 5539944 - 102018518 AGCD01066567;AGCD01066568;GBDI01346045;XM_005408286 XP_005408343 MODEL 8817913 pseudo LOC102006298 heat shock factor-binding protein 1 pseudogene NW_004955582 64495 67098 - 102006298 AGCD01075739;AGCD01075740 MODEL 8916280 protein-coding Blcap BLCAP apoptosis inducing factor INVOLVED IN apoptotic nuclear changes (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog) NW_004955445 19116945 19127469 + 102018038 AGCD01039911;GBDF01089233;XM_005392557;XR_001235621 XP_005392614 MODEL 8735589 protein-coding Helt helt bHLH transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN central nervous system development (ortholog); GABAergic neuron differentiation in basal ganglia (ortholog); gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955403 23996488 23998290 - 102003399 AGCD01002266;GBDF01184267;XM_005373480;XM_005373481 XP_005373537;XP_005373538 MODEL 8717640 protein-coding LOC102025226 olfactory receptor 1468-like NW_004955467 13332532 13333473 + 102025226 AGCD01051671;XM_005399734 XP_005399791 MODEL 8720300 protein-coding Fam43a family with sequence similarity 43 member A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955420 14202955 14206087 - 102027191 AGCD01020933;GBDJ01138402;XM_005383185 XP_005383242 MODEL 8855704 ncrna LOC102023148 uncharacterized LOC102023148 NW_004955477 9694302 9699057 - 102023148 AGCD01055683;GBDF01223626;XR_001230830;XR_001230831;XR_001230832 MODEL 10390358 protein-coding LOC106147126 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like NW_004955521 1144856 1198489 + 106147126 AGCD01068174;AGCD01068175;AGCD01068176;AGCD01068177;GBDF01023350;GBDJ01208996;XM_013507078 XP_013362532 MODEL 8728454 protein-coding Cytip cytohesin 1 interacting protein INVOLVED IN regulation of cell adhesion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955449 15948739 15978641 + 102016766 AGCD01042204;GBDK01239047;XM_005393410;XM_013518801 XP_005393467;XP_013374255 MODEL 8970439 pseudo LOC102024515 ORM1-like protein 1 pseudogene NW_004955446 6139115 6140325 + 102024515 AGCD01040088 MODEL 8942418 protein-coding Kif1b kinesin family member 1B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); kinase binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); anterograde synaptic vesicle transport (ortholog); apoptotic process involved in development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN cytoplasmic vesicle (ortholog); mitochondrion (ortholog); neuron projection (ortholog) NW_004955486 3366791 3503845 - 102021353 AGCD01059024;AGCD01059025;AGCD01059026;AGCD01059027;AGCD01059028;AGCD01059029;AGCD01059030;AGCD01059031;AGCD01059032;GBBH01228626;GBCE01135289;XM_013504249 XP_013359703 MODEL 10063803 ncrna LOC106150065 uncharacterized LOC106150065 NW_004955463 7878341 8009516 - 106150065 AGCD01049748;AGCD01049749;AGCD01049750;AGCD01049751;AGCD01049752;GBDF01124015;XR_001236647 MODEL 8991887 protein-coding Trpm4 transient receptor potential cation channel subfamily M member 4 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN calcium ion transport (ortholog); calcium-mediated signaling (ortholog); cellular response to ATP (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); atrioventricular block (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955559 1539036 1581800 - 102022131 AGCD01073648;AGCD01073649;AGCD01073650;AGCD01073651;GBDJ01147170;XM_005412902;XM_005412903 XP_005412959;XP_005412960 MODEL 9049429 protein-coding Glra1 glycine receptor alpha 1 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); extracellularly glycine-gated ion channel activity (ortholog); glycine binding (ortholog); INVOLVED IN acrosome reaction (ortholog); action potential (ortholog); adult walking behavior (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; ASSOCIATED WITH cervical cancer (ortholog); Developmental Disabilities (ortholog); dystonia (ortholog); FOUND IN calyx of Held (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955408 6236092 6333166 - 102024428 AGCD01008166;AGCD01008167;AGCD01008168;AGCD01008169;AGCD01008170;AGCD01008171;AGCD01008172;GBDF01162970;XM_005376173;XM_005376174;XM_005376175;XM_005376177;XM_005376178 XP_005376230;XP_005376231;XP_005376232;XP_005376234;XP_005376235 MODEL 8740113 protein-coding Wdr44 WD repeat domain 44 ENCODES a protein that exhibits molecular sequestering activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cytosolic ciliogenesis (ortholog); negative regulation of cilium assembly (ortholog); regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brachydactyly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); microtubule (ortholog) NW_004955534 1492990 1599402 - 102017913 AGCD01070498;AGCD01070499;AGCD01070500;AGCD01070501;AGCD01070502;AGCD01070503;GBCB01089438;XM_005410462 XP_005410519 MODEL 8925503 protein-coding Mvb12b multivesicular body subunit 12B ENCODES a protein that exhibits lipid binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); ESCRT I complex (ortholog) NW_004955419 1949211 2116525 - 102011122 AGCD01019662;AGCD01019663;AGCD01019664;AGCD01019665;GBCE01103859;XM_013513279 XP_013368733 MODEL 8834092 pseudo LOC102022781 centromere protein N pseudogene NW_004955454 2753498 2754847 - 102022781 AGCD01045032 MODEL 9018779 protein-coding Gpc1 glypican 1 ENCODES a protein that exhibits collagen V binding (ortholog); copper ion binding (ortholog); fibroblast growth factor binding (ortholog); INVOLVED IN heparan sulfate proteoglycan catabolic process (ortholog); myelin assembly (ortholog); negative regulation of fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular matrix (ortholog); membrane raft (ortholog); neuronal cell body (ortholog) NW_004955542 947556 968295 - 102012898 AGCD01071485;AGCD01071486;GBBH01089560;GBCB01002513;XM_013508117 XP_013363571 MODEL 8879911 ncrna LOC102021447 uncharacterized LOC102021447 NW_004955419 7019339 7024396 - 102021447 AGCD01019869;GBDF01146333;XR_260613 MODEL 39134193 misc_rna 7SK 7SK RNA 8982202 pseudo LOC102003512 60S ribosomal protein L17-like NW_004955405 31689835 31691569 + 102003512 AGCD01005302 MODEL 8984713 ncrna LOC102013534 uncharacterized LOC102013534 NW_004955434 16255649 16273655 - 102013534 AGCD01032521;AGCD01032522;AGCD01032523;AGCD01032524;GBDF01288452;XR_261620 MODEL 8773732 protein-coding CUNH16orf89 chromosome unknown C16orf89 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955442 12496862 12507655 + 102027576 AGCD01037737;GBDF01030121;XM_005391253;XM_005391254;XM_005391255 XP_005391310;XP_005391311;XP_005391312 MODEL 8737995 pseudo LOC102007436 eukaryotic peptide chain release factor subunit 1 pseudogene NW_004955484 8653605 8660088 + 102007436 AGCD01058393 MODEL 8743051 protein-coding Setd7 SET domain containing 7, histone lysine methyltransferase ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); DNA damage response (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); cognitive disorder (ortholog); extrahepatic cholestasis (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955428 4131431 4178250 + 102017588 AGCD01027667;AGCD01027668;GBCE01001559;XM_005386687 XP_005386744 MODEL 9029664 protein-coding Bambi BMP and activin membrane bound inhibitor ENCODES a protein that exhibits frizzled binding (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of osteoblast differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic valve stenosis (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955429 21024396 21025890 + 102026898 AGCD01028996;GBBH01187263;GBCQ01093600;XM_013515562 XP_013371016 MODEL 8736669 protein-coding Ptgds prostaglandin D2 synthase ENCODES a protein that exhibits fatty acid binding (ortholog); prostaglandin-D synthase activity (ortholog); retinoid binding (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); gene expression (ortholog); negative regulation of male germ cell proliferation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH arteriosclerosis (ortholog); Breast Cancer, Familial (ortholog); carotid artery disease (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); rough endoplasmic reticulum (ortholog) NW_004955513 5009530 5012781 + 102028669 AGCD01066949;AGCD01066950;GBCQ01008032;XM_005408569 XP_005408626 MODEL 8703039 protein-coding Numbl NUMB like endocytic adaptor protein INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955578 636298 661566 + 102009899 AGCD01075490;AGCD01075491;GBBH01019159;XM_005414036;XM_005414037 XP_005414093;XP_005414094 MODEL 8730422 pseudo LOC102023509 T-complex protein 1 subunit eta pseudogene NW_004955430 22329815 22331867 - 102023509 AGCD01029786 MODEL 8794080 ncrna LOC102012013 uncharacterized LOC102012013 NW_004955431 310644 317292 - 102012013 AGCD01029865;GBDK01414667;XR_261437 MODEL 8922743 protein-coding LOC102003121 zinc finger protein 93-like NW_004955474 95780 107152 + 102003121 AGCD01054200;AGCD01054201;GBCE01168727;XM_005401299;XM_013502775;XM_013502776 XP_005401356;XP_013358229;XP_013358230 MODEL 8981138 protein-coding Plek pleckstrin ENCODES a protein that exhibits phosphatase activator activity (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cortical actin cytoskeleton organization (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); ruffle membrane (ortholog) NW_004955424 16494052 16524790 - 102022101 AGCD01024743;AGCD01024744;GBDK01147367;XM_005385668 XP_005385725 MODEL 8999662 ncrna LOC102018084 uncharacterized LOC102018084 NW_004955414 33063328 33066744 - 102018084 AGCD01015795;GBCB01039007;XR_001233137 MODEL 8920272 protein-coding Fkbp10 FKBP prolyl isomerase 10 ENCODES a protein that exhibits FK506 binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN aorta morphogenesis (ortholog); collagen fibril organization (ortholog); extracellular matrix assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Bruck syndrome (ortholog); Bruck Syndrome 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); membrane (ortholog) NW_004955451 16025008 16031950 + 102006529 AGCD01043648;GBDJ01004397;GBDJ01004405;XM_005394418 XP_005394475 MODEL 8957049 protein-coding Naalad2 N-acetylated alpha-linked acidic dipeptidase 2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); N-formylglutamate deformylase activity (ortholog); peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN membrane (ortholog) NW_004955414 3728596 3789265 - 102003432 AGCD01014839;AGCD01014840;AGCD01014841;GBDK01144211;XM_013511968;XM_013511969 XP_013367422;XP_013367423 MODEL 9007013 pseudo LOC102010065 plasminogen activator inhibitor 1 RNA-binding protein pseudogene NW_004955424 3444768 3446184 - 102010065 AGCD01024310;XR_261038 MODEL 39131728 rrna 5S_rRNA 5S ribosomal RNA 8842898 pseudo LOC102004908 60S ribosomal protein L30 pseudogene NW_004955409 17443551 17444672 - 102004908 AGCD01009784 MODEL 8921405 protein-coding Csnk1g1 casein kinase 1 gamma 1 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955450 11088601 11239227 + 102017727 AGCD01042647;AGCD01042648;AGCD01042649;AGCD01042650;AGCD01042651;GBCB01036123;GBDF01047813;XM_013518865 XP_013374319 MODEL 10089867 ncrna LOC106149275 uncharacterized LOC106149275 NW_004955442 7763570 7768715 - 106149275 AGCD01037628;GBDK01306787;XR_001235350 MODEL 8771669 protein-coding Gadd45a growth arrest and DNA damage inducible alpha ENCODES a protein that exhibits kinase binding (ortholog); promoter-specific chromatin binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to mechanical stimulus (ortholog); centrosome cycle (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Chloracne (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955423 23656516 23658367 - 102004617 AGCD01024009;GBCE01075925;XM_005385366 XP_005385423 MODEL 8942158 pseudo LOC102005937 olfactory receptor 2S2-like NW_004955419 21770973 21771933 + 102005937 AGCD01020283 MODEL 8830818 protein-coding Glra2 glycine receptor alpha 2 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); glycine binding (ortholog); glycine-gated chloride ion channel activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to ethanol (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH familial erythrocytosis 3 (ortholog); genetic disease (ortholog); myopia (ortholog); FOUND IN GABA-ergic synapse (ortholog); glycinergic synapse (ortholog); plasma membrane (ortholog) NW_004955519 3492313 3682028 - 102020369 AGCD01067960;AGCD01067961;AGCD01067962;AGCD01067963;AGCD01067964;XM_005409181;XM_005409182;XM_013506979 XP_005409238;XP_005409239;XP_013362433 MODEL 39132402 rrna 5S_rRNA 5S ribosomal RNA 39134194 misc_rna 7SK 7SK RNA 8785010 protein-coding Hnrnpf heterogeneous nuclear ribonucleoprotein F ENCODES a protein that exhibits single-stranded RNA binding (ortholog); TBP-class protein binding (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); renal glycosuria (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); synapse (ortholog) NW_004955546 1386186 1401071 - 102008264 AGCD01072054;AGCD01072055;AGCD01072056;GBDF01008558;XM_005411770 XP_005411827 MODEL 8994890 ncrna LOC102007447 uncharacterized LOC102007447 NW_004955496 3205929 3212240 - 102007447 AGCD01062284;GBCQ01088384;XR_264174 MODEL 9060382 protein-coding LOC102025227 cytochrome c oxidase subunit 6B1 INVOLVED IN substantia nigra development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955468 2884958 2891952 - 102025227 AGCD01051842;GBDI01012604;XM_005399978 XP_005400035 MODEL 8732875 ncrna LOC102007798 uncharacterized LOC102007798 NW_004955430 5482042 5492358 + 102007798 AGCD01029262;XR_261417 MODEL 39134500 misc_rna 7SK 7SK RNA 9035208 pseudo LOC102008897 60S ribosomal protein L36a-like NW_004955550 1877604 1877922 - 102008897 AGCD01072592 MODEL 8985772 protein-coding LOC102023153 protein CutA homolog NW_004955419 7160868 7199480 - 102023153 AGCD01019875;GBCE01012336;XM_005382586;XM_005382587;XM_005382588;XM_005382589;XM_005382590;XM_013513213 XP_005382643;XP_005382644;XP_005382645;XP_005382646;XP_005382647;XP_013368667 MODEL 10103913 protein-coding Iqcj IQ motif containing J NW_004955448 9937259 10186659 + 106149540 AGCD01041485;AGCD01041486;AGCD01041487;GBDF01122827;XM_013518667;XM_013518668;XM_013518669;XM_013518670;XM_013518671;XM_013518672;XM_013518673 XP_013374121;XP_013374122;XP_013374123;XP_013374124;XP_013374125;XP_013374126;XP_013374127 MODEL 8904416 ncrna LOC102003126 uncharacterized LOC102003126 NW_004955478 4555513 4561148 + 102003126 AGCD01055852;GBDF01157448;XR_001230854;XR_001230855 MODEL 8754380 protein-coding Banf1 barrier to autointegration nuclear assembly factor 1 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN chromatin organization (ortholog); DNA integration (ortholog); mitotic nuclear membrane reassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); condensed chromosome (ortholog) NW_004955422 19337038 19338824 - 102022089 AGCD01023001;GBDK01018620;XM_005384437 XP_005384494 MODEL 8766605 protein-coding Kif1c kinesin family member 1C INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); retrograde neuronal dense core vesicle transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955467 10399768 10423249 + 102024544 AGCD01051563;GBCB01004220;GBDI01060109;XM_005399633;XM_005399634 XP_005399690;XP_005399691 MODEL 8810341 protein-coding LOC102005250 olfactory receptor 51L1-like NW_004955414 21095282 21096259 - 102005250 AGCD01015407;XM_005380492 XP_005380549 MODEL 39132352 snrna U6 U6 spliceosomal RNA 8869665 protein-coding Ash2l ASH2 like, histone lysine methyltransferase complex subunit ENCODES a protein that exhibits beta-catenin binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN euchromatin (ortholog); histone methyltransferase complex (ortholog); MLL1 complex (ortholog) NW_004955463 13731651 13757475 + 102015818 AGCD01049885;AGCD01049886;GBCE01054486;XM_005398423;XM_005398424;XM_005398425;XM_005398426;XM_005398428;XM_005398429 XP_005398480;XP_005398481;XP_005398482;XP_005398483;XP_005398485;XP_005398486 MODEL 9015984 protein-coding Ddx49 DEAD-box helicase 49 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); RNA helicase activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); regulation of rRNA stability (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955524 2760692 2767709 - 102004196 AGCD01068834;GBCE01077604;XM_005409601 XP_005409658 MODEL 8741917 protein-coding Mvd mevalonate diphosphate decarboxylase ENCODES a protein that exhibits diphosphomevalonate decarboxylase activity (ortholog); Hsp70 protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); farnesyl diphosphate biosynthetic process, mevalonate pathway (ortholog); geranylgeranyl diphosphate biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisomal matrix (ortholog) NW_004955541 2578584 2581823 - 102026158 AGCD01071417;GBCQ01034042;GBDJ01082724;XM_013507990 XP_013363444 MODEL 9036126 protein-coding LOC102013536 uncharacterized LOC102013536 NW_004955526 4264331 4315647 - 102013536 AGCD01069364;AGCD01069365;GBDJ01399642;XM_013507356 XP_013362810 MODEL 8713794 pseudo LOC102003513 UDP-glucuronosyltransferase 1-8-like NW_004955453 2600059 2624326 - 102003513 AGCD01044634 MODEL 9064255 ncrna LOC102005254 uncharacterized LOC102005254 NW_004955417 12247480 12249907 + 102005254 AGCD01018159;GBDF01276663;XR_260475 MODEL 8781105 protein-coding Blk BLK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); peptidyl-tyrosine phosphorylation (ortholog); positive regulation of insulin secretion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); diabetes mellitus (ortholog); Kawasaki disease (ortholog) NW_004955403 52825397 52874007 + 102028368 AGCD01003019;AGCD01003020;GBBH01183458;XM_005373820;XM_005373821;XM_005373822;XM_005373823;XM_013514535 XP_005373877;XP_005373878;XP_005373879;XP_005373880;XP_013369989 MODEL 8746166 protein-coding Helz helicase with zinc finger ENCODES a protein that exhibits CCR4-NOT complex binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955478 6325632 6475144 - 102009050 AGCD01055892;AGCD01055893;AGCD01055894;GBDF01195418;XM_005402151;XM_005402152 XP_005402208;XP_005402209 MODEL 8865295 ncrna LOC102024517 uncharacterized LOC102024517 NW_004955447 14334061 14335005 - 102024517 AGCD01041000;GBDF01124752;XR_262426 MODEL 8740717 protein-coding Cytl1 cytokine like 1 INVOLVED IN cartilage homeostasis (ortholog); chondrocyte differentiation (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH melanoma (ortholog) NW_004955514 4826792 4831424 + 102024943 AGCD01067141;GBCB01053473;XM_005408829 XP_005408886 MODEL 10362257 ncrna LOC106147127 uncharacterized LOC106147127 NW_004955521 3261506 3302262 - 106147127 AGCD01068228;AGCD01068229;XR_001231885 MODEL 9053481 ncrna LOC102012424 uncharacterized LOC102012424 NW_004955415 32886303 32889353 - 102012424 AGCD01016738;GBDI01281650;XR_260333 MODEL 8763029 protein-coding Plek2 pleckstrin 2 ENCODES a protein that exhibits phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); erythrocyte enucleation (ortholog); positive regulation of cell projection organization (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955466 2818004 2836688 + 102016362 AGCD01050765;AGCD01050766;AGCD01050767;AGCD01050768;GBDF01147329;XM_005399083 XP_005399140 MODEL 8994906 protein-coding Trpm5 transient receptor potential cation channel subfamily M member 5 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN monoatomic ion transmembrane transport (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955422 14180067 14202041 - 102009068 AGCD01022855;GBBH01106809;XM_013514348;XM_013514349 XP_013369802;XP_013369803 MODEL 8737996 ncrna LOC102007799 uncharacterized LOC102007799 NW_004955431 12189719 12210492 + 102007799 AGCD01030254;GBDF01124095;XR_261466;XR_261467 MODEL 9028598 protein-coding Ndufaf6 NADH:ubiquinone oxidoreductase complex assembly factor 6 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955417 11159449 11180323 + 102003130 AGCD01018123;AGCD01018124;GBCC01035127;GBDF01252020;XM_013512780 XP_013368234 MODEL 8768224 ncrna LOC102004911 uncharacterized LOC102004911 NW_004955462 11137547 11152480 + 102004911 AGCD01049385;AGCD01049386;GBDF01120647;XR_263127;XR_263128 MODEL 8991985 protein-coding Csnk1g2 casein kinase 1 gamma 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955495 6087159 6103413 - 102022938 AGCD01062050;GBBH01030797;XM_005405937;XM_005405938 XP_005405994;XP_005405995 MODEL 39132353 snrna U6 U6 spliceosomal RNA 8724553 protein-coding Kif20a kinesin family member 20A ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); midbody abscission (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN midbody (ortholog); mitotic spindle (ortholog); spindle (ortholog) NW_004955418 2222398 2232775 - 102004929 AGCD01018753;GBDF01125758;XM_005382123 XP_005382180 MODEL 8744735 protein-coding Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); cellular response to peptide (ortholog); regulation of RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Experimental Autoimmune Orchitis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 937706 944969 + 102006213 AGCD01007944;GBCE01002251;GBCQ01011447;XM_005376023;XM_005376024;XM_005376025;XM_013507922;XM_013507925 XP_005376080;XP_005376081;XP_005376082;XP_013363376;XP_013363379 MODEL 8953998 protein-coding LOC102023511 lipocalin-1-like NW_004955513 2617713 2622926 - 102023511 AGCD01066883;GBBH01106908;XM_013506592 XP_013362046 MODEL 8769812 protein-coding Ptger1 prostaglandin E receptor 1 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); maternal process involved in parturition (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); allergic asthma (ortholog); Animal Mammary Neoplasms (ortholog) NW_004955415 33063052 33067580 - 102016702 AGCD01016748;GBDJ01401845;XM_005381104 XP_005381161 MODEL 8899267 protein-coding Mkrn2 makorin ring finger protein 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of inflammatory response to antigenic stimulus (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); high grade glioma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955429 18049617 18070526 - 102018957 AGCD01028874;GBDJ01234021;XM_005387105;XM_005387106 XP_005387162;XP_005387163 MODEL 10276227 protein-coding Snurf SNRPN upstream open reading frame ENCODES a protein that exhibits ATPase binding (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955416 31655664 31668803 + 106146229 AGCD01017766;AGCD01017767;AGCD01017768;XM_005381679 XP_005381736 MODEL 9044566 protein-coding Blm BLM RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); ATP binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); cellular response to camptothecin (ortholog); cellular response to hydroxyurea (ortholog); PARTICIPATES IN DNA replication pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); B-cell lymphoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); lateral element (ortholog) NW_004955416 14814753 14899865 + 102015513 AGCD01017283;AGCD01017284;AGCD01017285;AGCD01017286;GBDF01222241;XM_005381505;XM_005381506;XM_013512656;XM_013512657 XP_005381562;XP_005381563;XP_013368110;XP_013368111 MODEL 8767681 protein-coding LOC102010067 basic proline-rich protein-like NW_004955424 20327818 20328443 - 102010067 AGCD01024848;GBBH01018048;GBDK01212327;XM_013514645 XP_013370099 MODEL 8770092 protein-coding Fkbp11 FKBP prolyl isomerase 11 ASSOCIATED WITH Animal Disease Models (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955500 7744429 7747289 - 102028213 AGCD01063944;GBCB01007590;GBDF01084575;XM_013505646 XP_013361100 MODEL 39131729 rrna 5S_rRNA 5S ribosomal RNA 8716171 protein-coding Iqck IQ motif containing K ASSOCIATED WITH Alzheimer's disease (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 3428245 3548718 + 102011363 AGCD01037506;AGCD01037507;GBDF01043787;XM_005391117 XP_005391174 MODEL 8870751 protein-coding Gpc2 glypican 2 INVOLVED IN neuron differentiation (ortholog); positive regulation of neuron projection development (ortholog); smoothened signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955573 630859 637296 + 102025061 AGCD01074994;AGCD01074995;GBCE01101814;XM_013509490 XP_013364944 MODEL 8707739 pseudo LOC102006300 60S ribosomal protein L30-like NW_004955402 43644927 43645275 + 102006300 AGCD01001075 MODEL 10355913 ncrna LOC106149276 uncharacterized LOC106149276 NW_004955442 8520572 8565264 - 106149276 AGCD01037647;XR_001235351 MODEL 8815043 protein-coding Fam43b family with sequence similarity 43 member B NW_004955452 1102342 1104346 + 102010665 AGCD01043830;AGCD01043831;GBCQ01065920;XM_013519672 XP_013375126 MODEL 8898072 protein-coding Banf2 BANF family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955415 26671039 26692478 + 102010798 AGCD01016602;GBBH01129166;XM_005380909 XP_005380966 MODEL 9051417 protein-coding Gadd45b growth arrest and DNA damage inducible beta INVOLVED IN negative regulation of protein kinase activity (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of JNK cascade (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955495 4864932 4866728 + 102016393 AGCD01061959;AGCD01061960;GBBH01140651;GBDF01176680;XM_005405823 XP_005405880 MODEL 39132406 rrna 5S_rRNA 5S ribosomal RNA 9035347 protein-coding Setd9 SET domain containing 9 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955446 10994388 11004034 - 102013459 AGCD01040194;GBDF01050852;GBDF01050854;XM_013518469 XP_013373923 MODEL 8728120 ncrna LOC102007448 uncharacterized LOC102007448 NW_004955426 3095664 3103993 - 102007448 AGCD01026065;GBDI01311716;XR_261183 MODEL 10158233 ncrna LOC106150066 uncharacterized LOC106150066 NW_004955463 8607571 8738500 + 106150066 AGCD01049766;AGCD01049767;AGCD01049768;GBDF01305926;XR_001236648 MODEL 8916921 protein-coding Glra3 glycine receptor alpha 3 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); glycine-gated chloride ion channel activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to ethanol (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955403 32304178 32445135 + 102021199 AGCD01002433;AGCD01002434;AGCD01002435;GBDF01207743;XM_005373530;XM_005373531 XP_005373587;XP_005373588 MODEL 8985340 pseudo LOC102004912 wee1-like protein kinase 2 pseudogene NW_004955463 3267194 3269457 - 102004912 AGCD01049579 MODEL 39134195 misc_rna 7SK 7SK RNA 9057750 protein-coding Nup107 nucleoporin 107 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN female gonad development (ortholog); mRNA export from nucleus (ortholog); nephron development (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955458 15148773 15201717 + 102006425 AGCD01047866;AGCD01047867;AGCD01047868;AGCD01047869;AGCD01047870;AGCD01047871;AGCD01047872;AGCD01047873;AGCD01047874;GBDF01044628;XM_005397476;XM_013520899 XP_005397533;XP_013376353 MODEL 8749979 pseudo LOC102025229 small EDRK-rich factor 1 pseudogene NW_004955468 10128117 10128305 - 102025229 AGCD01052067;XM_005400310 MODEL 8875429 protein-coding Helz2 helicase with zinc finger 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); exoribonuclease II activity (ortholog); RNA helicase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of lipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955528 652381 666923 + 102008566 AGCD01069541;GBDI01062644;XM_005409957;XM_013507493 XP_005410014;XP_013362947 MODEL 8960216 pseudo LOC102022783 structural maintenance of chromosomes protein 3-like NW_004955406 18987510 18993997 - 102022783 AGCD01006071 MODEL 8803746 protein-coding Cyyr1 cysteine and tyrosine rich 1 NW_004955407 26208335 26313566 - 102021309 AGCD01007525;AGCD01007526;AGCD01007527;GBDJ01299809;XM_005375600 XP_005375657 MODEL 8854217 ncrna LOC102003132 uncharacterized LOC102003132 NW_004955417 30984825 30997985 + 102003132 AGCD01018637;GBDF01119746;XR_001233438;XR_001233439;XR_001233440;XR_001233441;XR_001233442 MODEL 8853816 protein-coding Naaladl1 N-acetylated alpha-linked acidic dipeptidase like 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); calcium ion binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN peptide catabolic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); fundus dystrophy (ortholog); lung cancer (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog) NW_004955422 20134334 20145970 + 102019284 AGCD01023066;AGCD01023067;GBDF01166707;XM_005384524 XP_005384581 MODEL 8896777 protein-coding CUNH16orf90 chromosome unknown C16orf90 homolog ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955442 13890284 13892362 + 102024618 AGCD01037795;GBDF01062070;XM_005391341;XM_005391342 XP_005391398;XP_005391399 MODEL 9033701 ncrna LOC102005939 uncharacterized LOC102005939 NW_004955420 14870439 14874125 + 102005939 AGCD01020956;GBDI01175768;XR_001233663;XR_001233664;XR_001233665 MODEL 8749420 protein-coding Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 ASSOCIATED WITH dilated cardiomyopathy (ortholog); Gitelman syndrome (ortholog); syndromic X-linked intellectual developmental disorder Bain type (ortholog); FOUND IN nucleoplasm (ortholog); postsynaptic density (ortholog); ribonucleoprotein complex (ortholog) NW_004955503 7535987 7541622 + 102027427 AGCD01064795;GBCQ01011461;XM_005406955 XP_005407012 MODEL 8946994 protein-coding Asic1 acid sensing ion channel subunit 1 ENCODES a protein that exhibits monoatomic cation channel activity (ortholog); monoatomic ion channel activity (ortholog); monoatomic ion-gated channel activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral fear response (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); brain ischemia (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955547 635714 658541 + 102013877 AGCD01072170;AGCD01072171;GBDI01179653;XM_005411871;XM_005411872;XM_013508480;XM_013508481 XP_005411928;XP_005411929;XP_013363934;XP_013363935 MODEL 8863415 protein-coding LOC102018085 protein FAM205A-like NW_004955472 1304677 1310702 + 102018085 AGCD01053385;GBDF01086556;XM_005401038;XM_005401039;XM_005401040 XP_005401095;XP_005401096;XP_005401097 MODEL 8724762 protein-coding Ddx5 DEAD-box helicase 5 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); androgen receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955478 7367049 7375043 + 102012756 AGCD01055958;AGCD01055959;GBDF01007791;XM_013503173 XP_013358627 MODEL 8923205 ncrna LOC102003516 uncharacterized LOC102003516 NW_004955456 14326450 14331839 - 102003516 AGCD01046639;GBBH01024435;XR_001236348;XR_262903 MODEL 8755004 protein-coding Mvk mevalonate kinase ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); farnesyl diphosphate biosynthetic process, mevalonate pathway (ortholog); geranylgeranyl diphosphate biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); Arthralgia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisome (ortholog) NW_004955455 8933250 8953883 - 102019772 AGCD01045912;GBCQ01069387;XM_005396449 XP_005396506 MODEL 8886290 ncrna LOC102005256 uncharacterized LOC102005256 NW_004955481 2964634 3031561 - 102005256 AGCD01056891;GBDF01045486;XR_001230937;XR_263772 MODEL 39134501 misc_rna 7SK 7SK RNA 8877881 pseudo LOC102008902 nucleolar protein 58 pseudogene NW_004955446 12111400 12115335 + 102008902 AGCD01040224;AGCD01040225 MODEL 8859072 protein-coding Bank1 B cell scaffold protein with ankyrin repeats 1 ENCODES a protein that exhibits phospholipase binding (ortholog); protease binding (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN B cell activation (ortholog); negative regulation of B cell activation (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autoimmune thyroiditis (ortholog); cervical cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955496 6267618 6511195 - 102030212 AGCD01062366;AGCD01062367;GBDI01294378;XM_013505420;XM_013505421 XP_013360874;XP_013360875 MODEL 8882215 pseudo LOC102021449 pyrethroid hydrolase Ces2e-like NW_004955484 9684942 9693526 - 102021449 AGCD01058425 MODEL 9038613 protein-coding LOC102023155 olfactory receptor 50-like NW_004955419 5473161 5474099 - 102023155 AGCD01019813;XM_013513119 XP_013368573 MODEL 8894395 ncrna LOC102004913 uncharacterized LOC102004913 NW_004955411 7852711 7855811 - 102004913 AGCD01011712;GBDF01042682;XR_259927 MODEL 39131730 rrna 5S_rRNA 5S ribosomal RNA 8737186 ncrna LOC102007802 uncharacterized LOC102007802 NW_004955433 6683298 6685871 - 102007802 AGCD01031546;GBDF01076212;XR_261563 MODEL 8925949 protein-coding Blmh bleomycin hydrolase ENCODES a protein that exhibits aminopeptidase activity (ortholog); identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN response to toxic substance (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955481 3031283 3078678 + 102003869 AGCD01056891;AGCD01056892;AGCD01056893;GBDF01058051;XM_005402657;XM_005402658;XM_005402659 XP_005402714;XP_005402715;XP_005402716 MODEL 8909719 pseudo LOC102013537 coiled-coil domain-containing protein 90B, mitochondrial pseudogene NW_004955533 59109 60126 - 102013537 AGCD01070311 MODEL 9022945 protein-coding Fkbp14 FKBP prolyl isomerase 14 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH congenital muscular dystrophy (ortholog); Ehlers-Danlos syndrome kyphoscoliotic type 2 (ortholog) NW_004955410 31313637 31325544 - 102018479 AGCD01011321;GBCE01159547;XM_005377493 XP_005377550 MODEL 8772168 protein-coding Trpm6 transient receptor potential cation channel subfamily M member 6 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); magnesium ion transmembrane transport (ortholog); metal ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); nucleus (ortholog) NW_004955512 4179194 4323523 + 102006059 AGCD01066733;AGCD01066734;AGCD01066735;AGCD01066736;AGCD01066737;AGCD01066738;AGCD01066739;AGCD01066740;AGCD01066741;GBDJ01377962;XM_005408321;XM_013506547 XP_005408378;XP_013362001 MODEL 39132354 snrna U6 U6 spliceosomal RNA 8964918 protein-coding LOC102012015 carboxylesterase 1D-like NW_004955433 13630963 13654307 - 102012015 AGCD01031696;GBDF01156979;XM_013516095;XM_013516096 XP_013371549;XP_013371550 MODEL 8962681 protein-coding Csnk1g3 casein kinase 1 gamma 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955521 1660090 1721811 + 102012017 AGCD01068191;AGCD01068192;GBDJ01227979;XM_005409308;XM_005409309;XM_005409310;XM_005409311;XM_005409312;XM_005409314;XM_005409315;XM_005409316 XP_005409365;XP_005409366;XP_005409367;XP_005409368;XP_005409369;XP_005409371;XP_005409372;XP_005409373 MODEL 39132408 rrna 5S_rRNA 5S ribosomal RNA 8836488 protein-coding LOC102024519 vomeronasal type-1 receptor 1-like NW_004955584 372741 373664 - 102024519 AGCD01075940;XM_005414410 XP_005414467 MODEL 8891627 protein-coding Iqcm IQ motif containing M NW_004955471 4250345 4645729 - 102018715 AGCD01053071;AGCD01053072;AGCD01053073;AGCD01053074;AGCD01053075;AGCD01053076;AGCD01053077;AGCD01053078;AGCD01053079;AGCD01053080;AGCD01053081;AGCD01053082;AGCD01053083;AGCD01053084;GBDF01127836;XM_005400877;XM_005400878;XM_005400879;XM_005400880;XM_013522868;XM_013522869 XP_005400934;XP_005400935;XP_005400936;XP_005400937;XP_013378322;XP_013378323 MODEL 8926288 protein-coding Kif20b kinesin family member 20B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); microtubule binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN neural tube closure (ortholog); neuron projection morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); contractile ring (ortholog) NW_004955425 3261269 3313891 - 102014468 AGCD01025284;AGCD01025285;GBDF01194821;XM_005385846 XP_005385903 MODEL 8785612 protein-coding Wdr45 WD repeat domain 45 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Arachnodactyly (ortholog); astigmatism (ortholog); FOUND IN cytoplasm (ortholog); phagophore assembly site (ortholog) NW_004955543 597796 604163 - 102006712 AGCD01071593;GBDI01078234;XM_005411316;XM_005411317;XM_005411319;XM_013508149 XP_005411373;XP_005411374;XP_005411376;XP_013363603 MODEL 8975249 ncrna LOC102003519 uncharacterized LOC102003519 NW_004955459 3020453 3021512 - 102003519 AGCD01048006;GBDF01017116;XR_263011 MODEL 9052836 protein-coding LOC102012426 BBSome-interacting protein 1-like NW_004955478 7258776 7259420 - 102012426 AGCD01055956;XM_005402160 XP_005402217 MODEL 8730101 ncrna LOC102007453 uncharacterized LOC102007453 NW_004955510 4663031 4720789 - 102007453 AGCD01066268;AGCD01066269;AGCD01066270;GBDF01122818;XR_001231663;XR_001231664;XR_264408 MODEL 9036362 pseudo LOC102023513 intraflagellar transport protein 52 homolog pseudogene NW_004955432 3741438 3742765 + 102023513 AGCD01030676 MODEL 10386954 ncrna LOC106150067 uncharacterized LOC106150067 NW_004955463 13702644 13731579 - 106150067 AGCD01049885;GBDF01225662;XR_001236649 MODEL 9049626 protein-coding Ptger2 prostaglandin E receptor 2 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cAMP metabolic process (ortholog); ASSOCIATED WITH Abscess (ortholog); allergic asthma (ortholog); aspirin-induced respiratory disease (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); synapse (ortholog) NW_004955409 10760801 10775197 - 102010556 AGCD01009482;AGCD01009483;GBDJ01164140;XM_005376782;XM_005376783;XM_013510326;XM_013510327 XP_005376839;XP_005376840;XP_013365780;XP_013365781 MODEL 8904162 protein-coding Snw1 SNW domain containing 1 ENCODES a protein that exhibits enzyme binding (ortholog); Notch binding (ortholog); nuclear androgen receptor binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); host-mediated activation of viral transcription (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); anemia (ortholog); Brain Injuries (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); cyclin/CDK positive transcription elongation factor complex (ortholog) NW_004955438 1561562 1601492 - 102019433 AGCD01034986;GBDF01008825;XM_005390214 XP_005390271 MODEL 8785212 protein-coding Mkrn2os MKRN2 opposite strand ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955429 18082860 18090776 + 102020271 AGCD01028876;AGCD01028877;GBCQ01126845;XM_005387110 XP_005387167 MODEL 8778166 protein-coding Ndufaf7 NADH:ubiquinone oxidoreductase complex assembly factor 7 ENCODES a protein that exhibits enzyme binding (ortholog); protein-arginine omega-N symmetric methyltransferase activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); peptidyl-arginine methylation, to symmetrical-dimethyl arginine (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955441 5033754 5051720 + 102005971 AGCD01036867;GBDF01044676;XM_005390873;XM_013517532;XM_013517533 XP_005390930;XP_013372986;XP_013372987 MODEL 8881967 ncrna LOC102010070 uncharacterized LOC102010070 NW_004955500 4830109 4994911 - 102010070 AGCD01063812;AGCD01063813;AGCD01063814;AGCD01063815;AGCD01063816;AGCD01063817;AGCD01063818;AGCD01063819;AGCD01063820;GBBH01147088;XR_001231473;XR_001231474;XR_001231475;XR_001231476;XR_001231477;XR_001231478;XR_001231479;XR_001231480;XR_001231481;XR_001231482;XR_001231483;XR_264227 MODEL 8930759 protein-coding Gpc3 glypican 3 ENCODES a protein that exhibits peptidyl-dipeptidase inhibitor activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior axis specification (ortholog); body morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arterial Occlusive Diseases (ortholog); atypical teratoid rhabdoid tumor (ortholog); FOUND IN lysosome (ortholog); plasma membrane (ortholog) NW_004955473 969627 1431706 + 102022912 AGCD01053863;AGCD01053864;AGCD01053865;AGCD01053866;AGCD01053867;AGCD01053868;AGCD01053869;AGCD01053870;AGCD01053871;AGCD01053872;AGCD01053873;AGCD01053874;GBCE01095948;XM_013523049 XP_013378503 MODEL 8903871 ncrna LOC102006301 uncharacterized LOC102006301 NW_004955450 13203566 13210711 - 102006301 AGCD01042729;GBDF01222682;XR_001235845;XR_001235847;XR_001235848 MODEL 9056314 protein-coding LOC102010850 cytochrome P450 1A1 ENCODES a protein that exhibits arachidonate monooxygenase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); amine metabolic process (ortholog); camera-type eye development (ortholog); PARTICIPATES IN gefitinib pharmacokinetics pathway; phase I biotransformation pathway via cytochrome P450; tamoxifen pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955450 3183958 3189488 + 102010850 AGCD01042426;GBDK01432211;XM_005393546;XM_005393547 XP_005393603;XP_005393604 MODEL 8761095 protein-coding Naaladl2 N-acetylated alpha-linked acidic dipeptidase like 2 INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955420 4325331 5554156 + 102005810 AGCD01020638;AGCD01020639;AGCD01020640;AGCD01020641;AGCD01020642;AGCD01020643;AGCD01020644;AGCD01020645;AGCD01020646;AGCD01020647;AGCD01020648;AGCD01020649;AGCD01020650;AGCD01020651;AGCD01020652;AGCD01020653;AGCD01020654;AGCD01020655;AGCD01020656;AGCD01020657;AGCD01020658;AGCD01020659;AGCD01020660;AGCD01020661;AGCD01020662;AGCD01020663;AGCD01020664;AGCD01020665;AGCD01020666;AGCD01020667;AGCD01020668;AGCD01020669;AGCD01020670;AGCD01020671;GBCB01088502;GBDF01287807;XM_005383020;XM_013513456 XP_005383077;XP_013368910 MODEL 8727323 protein-coding LOC102005943 myoD family inhibitor domain-containing protein-like NW_004955421 17734841 17752220 + 102005943 AGCD01022030;XM_005383926 XP_005383983 MODEL 8811802 protein-coding Asic2 acid sensing ion channel subunit 2 ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to xenobiotic stimulus (ortholog); detection of mechanical stimulus involved in sensory perception (ortholog); ASSOCIATED WITH autistic disorder (ortholog); dilated cardiomyopathy 1A (ortholog); high grade glioma (ortholog); FOUND IN dendritic spine (ortholog); membrane (ortholog); neuron projection (ortholog) NW_004955481 7850730 8093255 - 102030422 AGCD01057078;AGCD01057079;AGCD01057080;GBBH01205767;GBDJ01044546;XM_005402835 XP_005402892 MODEL 8900040 pseudo LOC102012019 RNA-binding motif protein, X chromosome-like NW_004955436 8932484 8933843 - 102012019 AGCD01033755;XR_261778 MODEL 8711734 pseudo LOC102025231 60S ribosomal protein L36 pseudogene NW_004955469 290871 292912 + 102025231 AGCD01052216 MODEL 8800829 protein-coding Hemgn hemogen INVOLVED IN chromatin organization (ortholog); erythrocyte differentiation (ortholog); erythrocyte maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nephronophthisis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955419 27524008 27548375 + 102020342 AGCD01020441;GBDI01161766;XM_005382835;XM_005382836 XP_005382892;XP_005382893 MODEL 8824359 pseudo LOC102024520 protein DBF4 homolog A-like NW_004955612 137320 137941 + 102024520 AGCD01077180 MODEL 8807082 protein-coding Ddx50 DExD-box helicase 50 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) NW_004955437 22086704 22118177 - 102028015 AGCD01034929;GBDJ01076042;XM_005390102 XP_005390159 MODEL 8865346 protein-coding Glra4 glycine receptor alpha 4 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); response to amino acid (ortholog); FOUND IN glycinergic synapse (ortholog); perikaryon (ortholog); plasma membrane (ortholog) NW_004955548 712257 736279 - 102028021 AGCD01072341;GBDK01027911;XM_005411996;XM_013508522 XP_005412053;XP_013363976 MODEL 9011890 protein-coding Nup133 nucleoporin 133 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); nephron development (ortholog); neural tube development (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955492 8583902 8641891 + 102017581 AGCD01060821;AGCD01060822;GBDF01118376;XM_005405007 XP_005405064 MODEL 8767931 protein-coding Plekha1 pleckstrin homology domain containing A1 ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); B cell receptor signaling pathway (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955477 659640 730394 + 102020112 AGCD01055492;AGCD01055493;AGCD01055494;GBDF01226547;XM_005401937;XM_005401939;XM_005401940;XM_005401941;XM_005401942;XM_005401943;XM_005401945;XM_013503083;XM_013503084 XP_005401994;XP_005401996;XP_005401997;XP_005401998;XP_005401999;XP_005402000;XP_005402002;XP_013358537;XP_013358538 MODEL 8847922 protein-coding LOC102003136 histone H2A type 1-A INVOLVED IN chromatin organization (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955483 1358562 1359048 + 102003136 AGCD01057645;GBDF01054005;XM_005403345 XP_005403402 MODEL 8705787 protein-coding CUNH16orf96 chromosome unknown C16orf96 homolog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955442 12834662 12879308 - 102009323 AGCD01037747;AGCD01037748;GBDK01184197;XM_005391288;XM_005391289;XM_013517721;XM_013517722 XP_005391345;XP_005391346;XP_013373175;XP_013373176 MODEL 8888610 protein-coding Fam50a family with sequence similarity 50 member A INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH Armfield syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955580 941620 947763 + 102003920 AGCD01075630;AGCD01075631;GBCB01038185;XM_005414202 XP_005414259 MODEL 8752519 protein-coding Blnk B cell linker ENCODES a protein that exhibits enzyme binding (ortholog); lipid binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 4 (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955507 2398694 2466461 - 102015652 AGCD01065587;AGCD01065588;AGCD01065589;GBBH01092683;XM_005407570;XM_013506235;XM_013506236 XP_005407627;XP_013361689;XP_013361690 MODEL 8797824 pseudo LOC102018086 glyceraldehyde-3-phosphate dehydrogenase pseudogene NW_004955472 5347652 5348320 - 102018086 AGCD01053576 MODEL 8908039 protein-coding Plekha2 pleckstrin homology domain containing A2 ENCODES a protein that exhibits fibronectin binding (ortholog); laminin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of cell-matrix adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955463 14462875 14525174 + 102027500 AGCD01049910;AGCD01049911;GBCE01011414;XM_005398458;XM_005398460;XM_005398461;XM_013521516;XM_013521517 XP_005398515;XP_005398517;XP_005398518;XP_013376970;XP_013376971 MODEL 10329813 ncrna LOC106147128 uncharacterized LOC106147128 NW_004955521 3747314 3771135 - 106147128 AGCD01068243;AGCD01068244;AGCD01068245;GBDI01145169;XR_001231886 MODEL 9000283 protein-coding Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone H3K14ac reader activity (ortholog); INVOLVED IN bone development (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); gene expression (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955588 290497 338438 + 102017932 AGCD01076102;AGCD01076103;AGCD01076104;AGCD01076105;GBDF01085935;XM_005414466;XM_005414467;XM_005414468;XM_005414469;XM_013509910;XM_013509911 XP_005414523;XP_005414524;XP_005414525;XP_005414526;XP_013365364;XP_013365365 MODEL 8950412 protein-coding Fkbp15 FKBP prolyl isomerase family member 15 ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955419 14264488 14329890 + 102026641 AGCD01020015;AGCD01020016;GBDF01191885;XM_005382688;XM_005382689 XP_005382745;XP_005382746 MODEL 8903893 protein-coding Mvp major vault protein ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN cell population proliferation (ortholog); ERBB signaling pathway (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955493 7113194 7141944 - 102007565 AGCD01061154;AGCD01061155;AGCD01061156;GBDJ01000869;XM_005405235;XM_013504773 XP_005405292;XP_013360227 MODEL 8830066 pseudo LOC102021450 40S ribosomal protein S24 pseudogene NW_004955420 610075 610467 - 102021450 AGCD01020550 MODEL 8908579 protein-coding Csnk2a1 casein kinase 2 alpha 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); kinase activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); DNA damage response (ortholog); double-strand break repair (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); adult T-cell leukemia/lymphoma (ortholog); allergic disease (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955597 326601 397112 - 102022145 AGCD01076554;AGCD01076555;AGCD01076556;GBBH01087974;XM_005414727 XP_005414784 MODEL 9035096 pseudo LOC102003520 60S ribosomal protein L39 pseudogene NW_004955459 14326789 14327010 - 102003520 AGCD01048297 MODEL 8836267 protein-coding Czib CXXC motif containing zinc binding protein ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); carnitine palmitoyltransferase II deficiency (ortholog); colorectal cancer (ortholog) NW_004955464 5930805 5937061 + 102012413 AGCD01050015;GBCE01031785;XM_005398560;XM_013521688;XM_013521689;XM_013521690 XP_005398617;XP_013377142;XP_013377143;XP_013377144 MODEL 8928433 protein-coding LOC102004915 tubulin alpha-1B chain-like NW_004955465 12912276 12919581 - 102004915 AGCD01050568;XM_013521782 XP_013377236 MODEL 8994520 protein-coding Kif21a kinesin family member 21A ENCODES a protein that exhibits ankyrin repeat binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); cortical microtubule organization (ortholog); regulation of axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aniridia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axonal growth cone (ortholog); presynapse (ortholog) NW_004955505 933254 1000039 + 102025143 AGCD01064964;GBCE01108734;GBDI01325563;XM_013505950 XP_013361404 MODEL 10351730 ncrna LOC106149277 uncharacterized LOC106149277 NW_004955442 9598267 9616531 - 106149277 AGCD01037686;GBDI01246361;XR_001235352 MODEL 39131731 rrna 5S_rRNA 5S ribosomal RNA 8894763 protein-coding Gadd45g growth arrest and DNA damage inducible gamma ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of protein kinase activity (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955515 2423137 2424851 - 102015435 AGCD01067249;GBCB01006318;XM_005408873 XP_005408930 MODEL 8843804 ncrna LOC102010072 uncharacterized LOC102010072 NW_004955426 20756048 20787650 - 102010072 AGCD01026575;GBBH01059919;XR_001234330;XR_001234331;XR_001234332 MODEL 8910682 protein-coding Nup153 nucleoporin 153 ENCODES a protein that exhibits chromatin binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); negative regulation of RNA export from nucleus (ortholog); nuclear pore complex assembly (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN annulate lamellae (ortholog); membrane (ortholog); nuclear envelope (ortholog) NW_004955483 8377253 8457018 + 102020341 AGCD01057833;AGCD01057834;AGCD01057835;GBBH01166056;XM_005403396;XM_005403397;XM_005403401;XM_005403403;XM_005403404;XM_013503820 XP_005403453;XP_005403454;XP_005403458;XP_005403460;XP_005403461;XP_013359274 MODEL 10082705 protein-coding Mkrn3 makorin ring finger protein 3 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); central precocious puberty 2 (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) NW_004955416 31052939 31054615 + 106148130 AGCD01017725;XM_013512447 XP_013367901 MODEL 39132355 snrna U6 U6 spliceosomal RNA 8986002 protein-coding Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 INVOLVED IN epithelial cell differentiation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955425 20619212 20631915 + 102004297 AGCD01025750;AGCD01025751;GBCE01002270;XM_005385979;XM_005385981;XM_005385983 XP_005386036;XP_005386038;XP_005386040 MODEL 8920249 protein-coding LOC102005257 zinc finger protein 14-like NW_004955417 31483286 31502861 - 102005257 AGCD01018652;AGCD01018653;GBBH01203101;XM_005381973 XP_005382030 MODEL 9043529 protein-coding Trpm7 transient receptor potential cation channel subfamily M member 7 ENCODES a protein that exhibits actin binding (ortholog); calcium channel activity (ortholog); kinase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoma (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); neuronal cell body (ortholog) NW_004955409 3690722 3787139 + 102028060 AGCD01009259;AGCD01009260;GBDF01237858;XM_005376661;XM_005376664;XM_005376665 XP_005376718;XP_005376721;XP_005376722 MODEL 9068357 protein-coding Nab1 NGFI-A binding protein 1 INVOLVED IN endochondral ossification (ortholog); myelination (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955403 8456572 8487749 - 102028813 AGCD01001878;GBCE01084794;GBCQ01151386;XM_013512258 XP_013367712 MODEL 39134502 misc_rna 7SK 7SK RNA 9064359 protein-coding LOC102008903 prolactin-like NW_004955576 90664 96906 - 102008903 AGCD01075255;XM_005413945 XP_005414002 MODEL 8868220 pseudo LOC102023157 C-Myc-binding protein pseudogene NW_004955486 9448816 9449441 - 102023157 AGCD01059186 MODEL 9042685 protein-coding LOC102022785 interferon-induced GTP-binding protein Mx1 NW_004955407 40884281 40906469 - 102022785 AGCD01007852;GBDK01080843;XM_005375852 XP_005375909 MODEL 8815650 pseudo LOC102007454 60 kDa heat shock protein, mitochondrial pseudogene NW_004955429 3122832 3124566 - 102007454 AGCD01028458 MODEL 8972043 protein-coding Plekha3 pleckstrin homology domain containing A3 ENCODES a protein that exhibits identical protein binding (ortholog); molecular carrier activity (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955403 18347309 18366503 - 102025747 AGCD01002097;GBCE01098308;GBDK01139966;XM_013512613 XP_013368067 MODEL 8992459 ncrna LOC102012023 uncharacterized LOC102012023 NW_004955437 2178719 2183875 + 102012023 AGCD01034261;AGCD01034262;GBDF01160448;XR_001235086;XR_001235087;XR_001235088 MODEL 8969247 protein-coding Wdr45b WD repeat domain 45B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); TSC1-TSC2 complex binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); lysosome (ortholog); phagophore assembly site (ortholog) NW_004955506 515364 556507 + 102006797 AGCD01065230;AGCD01065231;AGCD01065232;GBDF01081047;XM_005407188 XP_005407245 MODEL 8714405 pseudo LOC102025233 olfactory receptor 52B2-like NW_004955414 20838501 20839444 - 102025233 AGCD01015390 MODEL 8927081 ncrna LOC102023515 uncharacterized LOC102023515 NW_004955517 2388935 2391683 + 102023515 AGCD01067629;GBBH01024160;XR_264549 MODEL 8721617 pseudo LOC102003523 dimethylaniline monooxygenase [N-oxide-forming] 5-like NW_004955462 10251055 10272845 - 102003523 AGCD01049359;AGCD01049360 MODEL 8755411 protein-coding Ptger3 prostaglandin E receptor 3 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bicarbonate transport (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN brush border membrane (ortholog); cell surface (ortholog); neuronal cell body (ortholog) NW_004955423 21096926 21164435 + 102004944 AGCD01023935;GBDF01208544;XM_005385244 XP_005385301 MODEL 8922039 protein-coding Gpc4 glypican 4 INVOLVED IN regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of presynapse assembly (ortholog); synaptic membrane adhesion (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN external side of plasma membrane (ortholog); glutamatergic synapse (ortholog); presynaptic membrane (ortholog) NW_004955473 1546615 1655822 + 102025680 AGCD01053878;AGCD01053879;AGCD01053880;GBCE01053611;XM_005401204 XP_005401261 MODEL 8926583 protein-coding LOC102006303 basic salivary proline-rich protein 4-like NW_004955451 12633382 12651062 - 102006303 AGCD01043417;GBCQ01011558;XM_005394240;XR_001235989 XP_005394297 MODEL 8785101 pseudo LOC102010851 transmembrane protein 69 pseudogene NW_004955402 725985 734220 - 102010851 AGCD01000031 MODEL 8803489 protein-coding LOC102007803 liver carboxylesterase 1-like NW_004955433 13305854 13329280 - 102007803 AGCD01031684;GBBH01002391;XM_005388326;XM_005388327 XP_005388383;XP_005388384 MODEL 8885455 protein-coding CUNH17orf100 chromosome unknown C17orf100 homolog NW_004955467 12155309 12158762 + 102007101 AGCD01051625;GBDF01156145;XM_005399667;XM_005399668 XP_005399724;XP_005399725 MODEL 39132414 rrna 5S_rRNA 5S ribosomal RNA 8710547 ncrna LOC102012427 uncharacterized LOC102012427 NW_004955479 4854411 4862694 - 102012427 AGCD01056335;AGCD01056336;GBDF01305284;XR_001230876 MODEL 8861761 protein-coding Iqcn IQ motif containing N INVOLVED IN single fertilization (ortholog); sperm flagellum assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955524 3181133 3195111 + 102020602 AGCD01068864;AGCD01068865;AGCD01068866;AGCD01068867;GBDF01002962;XM_013507314;XM_013507315;XM_013507316;XM_013507317;XM_013507318 XP_013362768;XP_013362769;XP_013362770;XP_013362771;XP_013362772 MODEL 9046352 protein-coding Banp BTG3 associated nuclear protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955541 2169303 2256779 + 102029225 AGCD01071404;AGCD01071405;AGCD01071406;GBDF01122106;XM_005411011;XM_005411012;XM_005411013;XM_005411014;XM_013507967;XM_013507969;XM_013507970 XP_005411068;XP_005411069;XP_005411070;XP_005411071;XP_013363421;XP_013363423;XP_013363424 MODEL 39132356 snrna U6 U6 spliceosomal RNA 8830201 protein-coding LOC102024522 glutamate-rich protein 1-like NW_004956601 108 3596 + 102024522 AGCD01079869;AGCD01079870;GBCE01024165;GBDK01393692;XM_005415206 XP_005415263 MODEL 9019379 protein-coding LOC102013545 olfactory receptor 12-like NW_004955542 1216378 1219233 - 102013545 AGCD01071494;AGCD01071495;XM_005411243 XP_005411300 MODEL 9027180 protein-coding Hemk1 HemK methyltransferase 1, mitochondrial release factors N(5)-glutamine ENCODES a protein that exhibits peptide chain release factor N(5)-glutamine methyltransferase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955532 2348123 2359423 + 102010196 AGCD01070224;GBCB01098063;XM_005410286;XM_005410287;XM_005410288;XM_005410289;XM_005410290;XM_005410291;XM_005410292;XM_005410293;XM_005410294;XM_005410295;XM_005410297;XM_005410298;XM_005410299;XM_005410300;XM_005410301;XM_013507651 XP_005410343;XP_005410344;XP_005410345;XP_005410346;XP_005410347;XP_005410348;XP_005410349;XP_005410350;XP_005410351;XP_005410352;XP_005410354;XP_005410355;XP_005410356;XP_005410357;XP_005410358;XP_013363105 MODEL 8934619 protein-coding Csnk2a2 casein kinase 2 alpha 2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); double-strand break repair (ortholog); liver regeneration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955433 15677788 15718894 - 102010938 AGCD01031761;AGCD01031762;GBBH01031942;GBDJ01352606;XM_005388434 XP_005388491 MODEL 8733033 protein-coding Glrb glycine receptor beta ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); extracellularly glycine-gated ion channel activity (ortholog); glycine binding (ortholog); INVOLVED IN acrosome reaction (ortholog); adult walking behavior (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); hyperekplexia (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) NW_004955471 10153197 10238052 - 102012186 AGCD01053227;GBDJ01354108;XM_005400944 XP_005401001 MODEL 10100650 pseudo LOC102003142 Ig heavy chain V-III region 23-like NW_004955487 14752 15297 - 102003142 AGCD01059204 MODEL 39134196 misc_rna 7SK 7SK RNA 9008565 protein-coding Plekha4 pleckstrin homology domain containing A4 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955559 1756695 1775558 + 102003593 AGCD01073666;GBCQ01039883;XM_005412930 XP_005412987 MODEL 8900409 protein-coding Fam50b family with sequence similarity 50 member B NW_004955465 9512675 9529848 - 102023790 AGCD01050492;XM_005398989 XP_005399046 MODEL 8840224 protein-coding Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 ENCODES a protein that exhibits protein-lysine-acetyltransferase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); cytosol (ortholog) NW_004955458 3352442 3356224 + 102020885 AGCD01047296;GBDF01048251;XM_005397258 XP_005397315 MODEL 8991062 pseudo LOC102018089 methyltransferase-like protein 17, mitochondrial NW_004955416 190699 192939 + 102018089 AGCD01016780 MODEL 8874200 protein-coding Gpc5 glypican 5 PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog) NW_004955404 16824366 18091464 - 102030266 AGCD01003574;AGCD01003575;AGCD01003576;AGCD01003577;AGCD01003578;AGCD01003579;AGCD01003580;AGCD01003581;AGCD01003582;AGCD01003583;AGCD01003584;AGCD01003585;AGCD01003586;AGCD01003587;AGCD01003588;AGCD01003589;AGCD01003590;AGCD01003591;AGCD01003592;AGCD01003593;AGCD01003594;AGCD01003595;AGCD01003596;AGCD01003597;AGCD01003598;AGCD01003599;AGCD01003600;AGCD01003601;AGCD01003602;AGCD01003603;AGCD01003604;AGCD01003605;AGCD01003606;AGCD01003607;GBDF01158698;XM_005374117;XM_005374118;XM_013516298 XP_005374174;XP_005374175;XP_013371752 MODEL 8944343 protein-coding Asic3 acid sensing ion channel subunit 3 ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion-gated channel activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of pain (ortholog); detection of mechanical stimulus involved in sensory perception (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Inflammation (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955491 5487788 5491562 + 102029189 AGCD01060484;GBDI01243786;XM_005404806;XM_005404807;XM_013504583;XM_013504584;XM_013504585 XP_005404863;XP_005404864;XP_013360037;XP_013360038;XP_013360039 MODEL 8793461 ncrna LOC102021452 uncharacterized LOC102021452 NW_004955420 19744171 19769843 + 102021452 AGCD01021066;GBDF01162139;XR_001233826;XR_260726 MODEL 8805961 protein-coding Ddx51 DEAD-box helicase 51 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955482 632030 636959 + 102022601 AGCD01057179;AGCD01057180;GBCB01077100;GBDF01052846;XM_013503597 XP_013359051 MODEL 9057440 protein-coding LOC102022788 olfactory receptor 6C4-like NW_004955458 2911101 2912036 - 102022788 AGCD01047255;XM_005397504 XP_005397561 MODEL 8951663 protein-coding Snx1 sorting nexin 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endosomal transport (ortholog); endosome membrane tubulation (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); early endosome (ortholog) NW_004955450 11266712 11306014 - 102020402 AGCD01042653;GBDK01008578;XM_005393766;XM_013518974;XM_013518975;XM_013518976;XM_013518977;XM_013518978;XM_013518979 XP_005393823;XP_013374428;XP_013374429;XP_013374430;XP_013374431;XP_013374432;XP_013374433 MODEL 8936648 pseudo LOC102024525 60 kDa heat shock protein, mitochondrial-like NW_004955452 17463482 17488548 + 102024525 AGCD01044555;AGCD01044556 MODEL 39131732 rrna 5S_rRNA 5S ribosomal RNA 8722577 protein-coding Iqgap1 IQ motif containing GTPase activating protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); MAP kinase scaffold activity (ortholog); INVOLVED IN caveola assembly (ortholog); cell migration (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955416 14558628 14652031 + 102014354 AGCD01017276;AGCD01017277;AGCD01017278;AGCD01017279;GBDF01087718;XM_005381503 XP_005381560 MODEL 8930363 pseudo LOC102025235 DNA-(apurinic or apyrimidinic site) lyase-like NW_004955472 7626486 7627408 - 102025235 AGCD01053624 MODEL 10284096 ncrna LOC106149278 uncharacterized LOC106149278 NW_004955442 7249678 7256896 - 106149278 AGCD01037623;GBDI01038145;XR_001235353 MODEL 8738867 pseudo LOC102005947 protein FAM72A-like NW_004955497 509767 511648 - 102005947 AGCD01062421 MODEL 9044789 ncrna LOC102023517 uncharacterized LOC102023517 NW_004955434 20459141 20481843 + 102023517 AGCD01032616;GBDF01086413;XR_261635 MODEL 39131383 protein-coding PTGER3 prostaglandin E receptor 3 8965816 ncrna LOC102006305 uncharacterized LOC102006305 NW_004955404 24896406 24991834 - 102006305 AGCD01003836;AGCD01003837;AGCD01003838;AGCD01003839;AGCD01003840;GBDF01084048;XR_001235103;XR_001235104 MODEL 8842768 protein-coding Gadd45gip1 GADD45G interacting protein 1 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN mitochondrial translation (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955415 31997679 32000009 - 102026970 AGCD01016705;GBBH01061507;XM_005381045 XP_005381102 MODEL 9022696 ncrna LOC102005258 uncharacterized LOC102005258 NW_004955481 9167420 9182478 - 102005258 AGCD01057096;GBDF01041181;XR_263795 MODEL 39131467 protein-coding MKRN3 makorin ring finger protein 3 9027341 protein-coding Nup155 nucleoporin 155 INVOLVED IN atrial cardiac muscle cell action potential (ortholog); miRNA processing (ortholog); mRNA export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955426 21997208 22057205 - 102015220 AGCD01026602;GBBH01057183;GBDF01003855;XM_005386214;XR_261216 XP_005386271 MODEL 10267281 ncrna LOC106147130 uncharacterized LOC106147130 NW_004955521 2558592 2564053 - 106147130 AGCD01068209;XR_001231887 MODEL 39134503 misc_rna 7SK 7SK RNA 9040250 ncrna LOC102008904 uncharacterized LOC102008904 NW_004955580 1286792 1287412 - 102008904 AGCD01075652;GBDK01422065;XR_265090 MODEL 10193152 ncrna LOC106150068 uncharacterized LOC106150068 NW_004955463 1326927 1328916 - 106150068 AGCD01049509;XR_001236650 MODEL 8859414 protein-coding Mxd1 MAX dimerization protein 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Cocaine-Related Disorders (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN chromatin (ortholog); Mad-Max complex (ortholog); nucleus (ortholog) NW_004955424 15209609 15235396 - 102012339 AGCD01024697;AGCD01024698;AGCD01024699;GBCQ01179727;GBDJ01278615;XM_005385634 XP_005385691 MODEL 8921312 protein-coding Ndufaf8 NADH:ubiquinone oxidoreductase complex assembly factor 8 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH bicuspid aortic valve disease (ortholog); blindness (ortholog); Bradycardia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955506 1771044 1773471 - 102010605 AGCD01065273;GBDK01348130;XM_005407296 XP_005407353 MODEL 9034890 protein-coding Nab2 NGFI-A binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN endochondral ossification (ortholog); myelination (ortholog); negative regulation of transcription by RNA polymerase III (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955458 4826464 4832487 + 102020984 AGCD01047442;AGCD01047443;GBBH01127052;XM_005397346;XM_005397347 XP_005397403;XP_005397404 MODEL 8721119 ncrna LOC102012428 uncharacterized LOC102012428 NW_004955417 7483800 7490830 + 102012428 AGCD01018005;AGCD01018006;GBDF01137161;XR_260463 MODEL 9023752 protein-coding LOC102023163 zinc finger protein 121-like NW_004955495 1204073 1216340 + 102023163 AGCD01061675;GBDF01156005;XM_005405568 XP_005405625 MODEL 8920470 protein-coding Fkbp1a FKBP prolyl isomerase 1A ENCODES a protein that exhibits activin receptor binding (ortholog); calcium channel regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cytokine-mediated signaling pathway (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Barth syndrome (ortholog); congenital heart disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955596 580106 606210 - 102014630 AGCD01076523;AGCD01076524;GBCB01000555;XM_005414705;XM_005414706;XM_013510019;XM_013510020 XP_005414762;XP_005414763;XP_013365473;XP_013365474 MODEL 8949283 protein-coding LOC102004922 olfactory receptor 51V1-like NW_004955414 21049076 21057022 - 102004922 AGCD01015402;AGCD01015403;AGCD01015404;XM_005380491 XP_005380548 MODEL 8835262 ncrna LOC102007455 uncharacterized LOC102007455 NW_004955512 5582577 5590157 - 102007455 AGCD01066771;GBDF01177427;XR_264450 MODEL 8943569 protein-coding D2hgdh D-2-hydroxyglutarate dehydrogenase ENCODES a protein that exhibits (R)-2-hydroxyglutarate dehydrogenase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN lactate metabolic process (ortholog); malate metabolic process (ortholog); protein destabilization (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); amino acid metabolic disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955542 99379 130447 - 102003906 AGCD01071456;AGCD01071457;GBCE01077173;XM_005411112;XM_005411114;XM_013508084;XM_013508085;XM_013508086;XR_001232164 XP_005411169;XP_005411171;XP_013363538;XP_013363539;XP_013363540 MODEL 8909157 pseudo LOC102021455 calcyclin-binding protein pseudogene NW_004955422 12772330 12772978 - 102021455 AGCD01022798 MODEL 8725278 protein-coding Kif21b kinesin family member 21B INVOLVED IN brain development (ortholog); corpus callosum development (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brain ischemia (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic endosome (ortholog) NW_004955406 37139168 37187543 - 102008285 AGCD01006571;GBDF01161913;XM_005375156;XM_005375158;XM_013522093;XR_001236847;XR_001236848;XR_001236849;XR_001236851;XR_001236852 XP_005375213;XP_005375215;XP_013377547 MODEL 8770172 protein-coding Wdr46 WD repeat domain 46 INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955437 1840875 1848258 - 102030345 AGCD01034239;GBDF01087150;XM_013516886 XP_013372340 MODEL 9016048 pseudo LOC102010073 nef-associated protein 1 pseudogene NW_004955503 3250978 3252092 - 102010073 AGCD01064620 MODEL 39134197 misc_rna 7SK 7SK RNA 8827207 ncrna LOC102010852 uncharacterized LOC102010852 NW_004955450 14836986 14845311 - 102010852 AGCD01042764;GBDF01009911;XR_262554;XR_262555 MODEL 8932508 protein-coding Csnk2b casein kinase 2 beta ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); endothelial tube morphogenesis (ortholog); liver regeneration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cell projection (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955437 210541 215725 + 102018972 AGCD01034111;GBDF01007324;XM_005389349;XM_005389350 XP_005389406;XP_005389407 MODEL 39132418 rrna 5S_rRNA 5S ribosomal RNA 8728818 pseudo LOC102007808 T-complex protein 1 subunit delta pseudogene NW_004955434 3956987 3963609 + 102007808 AGCD01032151;AGCD01032152;XR_261648 MODEL 8809666 protein-coding Hnrnpk heterogeneous nuclear ribonucleoprotein K ENCODES a protein that exhibits actinin binding (ortholog); ATPase binding (ortholog); C-rich single-stranded DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); camera-type eye development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Au-Kline Syndrome (ortholog); autistic disorder (ortholog); FOUND IN axon terminus (ortholog); catalytic step 2 spliceosome (ortholog); cell cortex (ortholog) NW_004955432 3246090 3257774 + 102004629 AGCD01030645;GBDF01010823;XM_005387940;XM_005387941;XM_005387942;XM_005387943;XM_005387944;XM_005387945;XM_005387946 XP_005387997;XP_005387998;XP_005387999;XP_005388000;XP_005388001;XP_005388002;XP_005388003 MODEL 8975019 protein-coding Setdb2 SET domain bifurcated histone lysine methyltransferase 2 ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cell cycle (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955431 2899849 2943091 + 102024712 AGCD01029942;GBCC01045530;XM_005387590;XM_005387591;XM_005387592;XM_013515747;XM_013515748 XP_005387647;XP_005387648;XP_005387649;XP_013371201;XP_013371202 MODEL 8770324 protein-coding Plekha5 pleckstrin homology domain containing A5 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN reproductive system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); BILATERAL CLEFT LIP (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955413 15239070 15470137 + 102012418 AGCD01014067;AGCD01014068;AGCD01014069;AGCD01014070;AGCD01014071;AGCD01014072;AGCD01014073;GBBH01165630;GBDF01085078;XM_013511432;XM_013511433;XM_013511434;XM_013511435 XP_013366886;XP_013366887;XP_013366888;XP_013366889 MODEL 8793469 protein-coding Bloc1s2 biogenesis of lysosomal organelles complex 1 subunit 2 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); transcription factor binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); centrosome (ortholog) NW_004955507 6138511 6144823 - 102021692 AGCD01065697;GBDI01131466;XM_005407689;XM_005407690;XR_264384 XP_005407746;XP_005407747 MODEL 8939353 pseudo LOC102003534 stAR-related lipid transfer protein 4 pseudogene NW_004955474 6726759 6727385 + 102003534 AGCD01054486;XM_005401390 MODEL 8919708 protein-coding LOC102012027 uncharacterized LOC102012027 NW_004955438 16193937 16196191 - 102012027 AGCD01035397;GBDI01015943;XM_013517279 XP_013372733 MODEL 9056910 protein-coding Asic4 acid sensing ion channel subunit family member 4 ENCODES a protein that exhibits pH-gated sodium channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebrotendinous xanthomatosis (ortholog); lung cancer (ortholog) NW_004955453 13937745 13961664 - 102030495 AGCD01044855;GBDI01164661;XM_005395514 XP_005395571 MODEL 8720686 protein-coding Hemk2 HemK methyltransferase 2, ETF1 glutamine and histone H4 lysine ENCODES a protein that exhibits arsenite methyltransferase activity (ortholog); histone H4K12 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN arsonoacetate metabolic process (ortholog); methylation (ortholog); negative regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleus (ortholog) NW_004955407 28256654 28277514 + 102023329 AGCD01007579;AGCD01007580;GBCB01099656;XM_005375604;XM_005375607;XR_259592 XP_005375661;XP_005375664 MODEL 10097621 ncrna LOC106149279 uncharacterized LOC106149279 NW_004955442 1700053 1725937 + 106149279 AGCD01037451;XR_001235354 MODEL 9020528 protein-coding LOC102003148 RNA-binding protein FUS NW_004955493 8027419 8038171 + 102003148 AGCD01061257;GBDJ01020436;GBDK01016818;XM_013504880;XM_013504881 XP_013360334;XP_013360335 MODEL 8724176 protein-coding Gadl1 GAD like acidic amino acid decarboxylase 1 ENCODES a protein that exhibits aspartate 1-decarboxylase activity (ortholog); sulfinoalanine decarboxylase activity (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); lung cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955430 22029481 22187807 - 102022728 AGCD01029781;GBCB01020087;XM_005387520;XM_005387521 XP_005387577;XP_005387578 MODEL 8961065 protein-coding LOC102005261 olfactory receptor 1L6 NW_004955419 5210223 5211170 - 102005261 AGCD01019789;XM_005382522 XP_005382579 MODEL 39132419 rrna 5S_rRNA 5S ribosomal RNA 8701935 protein-coding Cspg4 chondroitin sulfate proteoglycan 4 ENCODES a protein that exhibits collagen binding (ortholog); coreceptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN glial cell migration (ortholog); intracellular signal transduction (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autistic disorder (ortholog); basal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955450 2631310 2663118 + 102025198 AGCD01042392;AGCD01042393;GBCE01123444;XM_005393500 XP_005393557 MODEL 9052842 protein-coding Ndufb1 NADH:ubiquinone oxidoreductase subunit B1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955438 14443558 14449754 - 102013546 AGCD01035346;GBDF01084776;XM_005390443 XP_005390500 MODEL 8896012 protein-coding Nabp1 nucleic acid binding protein 1 ENCODES a protein that exhibits RNA binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); multiple sclerosis (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955403 7603002 7610925 - 102023862 AGCD01001860;GBDK01189321;XM_005373286;XM_013512191 XP_005373343;XP_013367645 MODEL 9029470 pseudo LOC102012430 39S ribosomal protein L21, mitochondrial pseudogene NW_004955417 9985249 9986014 + 102012430 AGCD01018063 MODEL 9003446 protein-coding LOC102024531 PC-esterase domain-containing protein 1A-like NW_004955457 2923724 2925741 - 102024531 AGCD01046755;AGCD01046756;GBDF01209626;XM_013520735 XP_013376189 MODEL 39131733 rrna 5S_rRNA 5S ribosomal RNA 8803616 protein-coding Glrx glutaredoxin ENCODES a protein that exhibits glutathione disulfide oxidoreductase activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to glucose stimulus (ortholog); negative regulation of hydrogen peroxide-mediated programmed cell death (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955418 16747709 16754718 + 102013829 AGCD01019128;GBDJ01126419;XM_005382234;XM_005382235 XP_005382291;XP_005382292 MODEL 8759618 protein-coding LOC102004923 spindle pole body component 110-like NW_004955415 787950 980102 + 102004923 AGCD01015854;AGCD01015855;AGCD01015856;GBDF01123992;XM_005380548;XM_005380549;XM_013512192;XM_013512193;XM_013512194;XM_013512195;XR_260257 XP_005380605;XP_005380606;XP_013367646;XP_013367647;XP_013367648;XP_013367649 MODEL 8847449 protein-coding Fam53a family with sequence similarity 53 member A ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955514 917344 947729 - 102015976 AGCD01067027;GBCE01130101;XM_005408700 XP_005408757 MODEL 8990611 protein-coding Trpm8 transient receptor potential cation channel subfamily M member 8 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955453 2185534 2265261 - 102004035 AGCD01044623;AGCD01044624;GBDF01103492;XM_005395332 XP_005395389 MODEL 8754508 protein-coding LOC102025236 olfactory receptor 11L1-like NW_004955473 3784391 3785317 - 102025236 AGCD01053938;XM_005401295 XP_005401352 MODEL 8984891 protein-coding Iqgap2 IQ motif containing GTPase activating protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); calmodulin binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); regulation of actin cytoskeleton organization (ortholog); thrombin-activated receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); filopodium (ortholog) NW_004955425 24167985 24384912 - 102021575 AGCD01025879;AGCD01025880;AGCD01025881;AGCD01025882;AGCD01025883;AGCD01025884;AGCD01025885;GBDI01062233;XM_005386040;XM_013514848 XP_005386097;XP_013370302 MODEL 9047452 ncrna LOC102010853 uncharacterized LOC102010853 NW_004955403 10441158 10452838 + 102010853 AGCD01001921;XR_259168 MODEL 8847491 ncrna LOC102018090 uncharacterized LOC102018090 NW_004955416 20999242 21004789 + 102018090 AGCD01017482;GBDI01164565;XR_260400 MODEL 9012143 protein-coding Ptger4 prostaglandin E receptor 4 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); allergic asthma (ortholog); Alzheimer's disease (ortholog); FOUND IN neuron projection terminus (ortholog); neuronal cell body (ortholog); nuclear membrane (ortholog) NW_004955426 24997811 25010822 + 102024139 AGCD01026701;GBDF01055599;XM_005386240 XP_005386297 MODEL 8841343 protein-coding LOC102006309 UDP-glucuronosyltransferase 1-8 NW_004955453 2386649 2547914 - 102006309 AGCD01044625;AGCD01044626;AGCD01044627;AGCD01044628;AGCD01044629;AGCD01044630;AGCD01044631;GBDI01068255;XM_005395338;XM_005395339;XM_005395340;XM_005395341;XM_013519894;XM_013519895;XM_013519897;XM_013519898 XP_005395395;XP_005395396;XP_005395397;XP_005395398;XP_013375348;XP_013375349;XP_013375351;XP_013375352 MODEL 9007829 protein-coding LOC102013554 olfactory receptor 4L1-like NW_004955550 104998 126818 - 102013554 AGCD01072481;AGCD01072482;XM_005412028 XP_005412085 MODEL 8719631 protein-coding Mks1 MKS transition zone complex subunit 1 INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cardiac septum morphogenesis (ortholog); cilium assembly (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 13 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955451 4805542 4818233 + 102029139 AGCD01043142;GBDF01248745;XM_005394033 XP_005394090 MODEL 10202566 ncrna LOC106147131 uncharacterized LOC106147131 NW_004955521 2847933 2853277 + 106147131 AGCD01068215;XR_001231888 MODEL 8963711 protein-coding Mxd3 MAX dimerization protein 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) NW_004955408 29555028 29560589 - 102023437 AGCD01008762;GBBH01183481;XM_005376425 XP_005376482 MODEL 8990784 pseudo LOC102008909 lupus La protein homolog pseudogene NW_004955402 62999061 63000015 - 102008909 AGCD01001651 MODEL 10200187 ncrna LOC106150069 uncharacterized LOC106150069 NW_004955463 6566436 6570948 + 106150069 AGCD01049684;GBCE01094774;XR_001236651 MODEL 8849307 protein-coding LOC102023164 uncharacterized LOC102023164 NW_004955423 5187581 5189464 - 102023164 AGCD01023556;XM_005385354 XP_005385411 MODEL 9060975 protein-coding Plekha6 pleckstrin homology domain containing A6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 40066260 40200629 - 102020415 AGCD01006653;AGCD01006654;GBDK01395763;XM_005375292;XM_005375295;XM_005375306;XM_013522685;XM_013522688;XM_013522690;XM_013522693;XM_013522695;XM_013522700;XM_013522703;XM_013522704;XM_013522706;XM_013522707;XM_013522709;XM_013522711;XM_013522720;XM_013522725;XM_013522731;XM_013522738;XM_013522746;XM_013522750;XM_013522753;XM_013522759;XR_001237018 XP_005375349;XP_005375352;XP_005375363;XP_013378139;XP_013378142;XP_013378144;XP_013378147;XP_013378149;XP_013378154;XP_013378157;XP_013378158;XP_013378160;XP_013378161;XP_013378163;XP_013378165;XP_013378174;XP_013378179;XP_013378185;XP_013378192;XP_013378200;XP_013378204;XP_013378207;XP_013378213 MODEL 9012088 protein-coding Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); transmembrane protein transporter activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); blood coagulation (ortholog); ASSOCIATED WITH Albinism (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955555 2183752 2186154 + 102022235 AGCD01073131;AGCD01073132;GBBH01208027;GBDK01228953;XM_013508764 XP_013364218 MODEL 8802989 protein-coding Bap1 BRCA1 associated deubiquitinase 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cysteine-type deubiquitinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); common myeloid progenitor cell proliferation (ortholog); erythrocyte differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); adrenocortical carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955430 2391970 2400645 - 102015750 AGCD01029165;GBDF01009197;XM_005387315;XM_013515572 XP_005387372;XP_013371026 MODEL 8720678 protein-coding LOC102022790 cytohesin-3 NW_004955460 13486286 13490486 + 102022790 AGCD01048690;GBCE01032925;XM_005397893 XP_005397950 MODEL 8879772 protein-coding Ddx52 DExD-box helicase 52 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955451 409827 437757 + 102020510 AGCD01042934;AGCD01042935;GBBH01126733;XM_005393911 XP_005393968 MODEL 8714543 pseudo LOC102007462 vesicle-associated membrane protein 8 pseudogene NW_004955434 10962508 10964570 + 102007462 AGCD01032368 MODEL 8959169 protein-coding Daam1 dishevelled associated activator of morphogenesis 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955466 12954557 13129483 + 102006889 AGCD01051147;AGCD01051148;AGCD01051149;AGCD01051150;GBDF01188476;XM_005399225;XM_005399226;XM_013521989;XM_013521990;XM_013521991 XP_005399282;XP_005399283;XP_013377443;XP_013377444;XP_013377445 MODEL 8771338 pseudo LOC102005948 coiled-coil domain-containing protein 152-like NW_004955424 19596277 19597238 - 102005948 AGCD01024830 MODEL 8830696 pseudo LOC102012028 pre-mRNA 3' end processing protein WDR33 pseudogene NW_004955439 20471999 20472958 - 102012028 AGCD01036114 MODEL 8813936 protein-coding LOC102023518 vomeronasal type-2 receptor 116-like NW_004955524 544031 559678 + 102023518 AGCD01068682;AGCD01068683;GBDF01056480;XM_013507186 XP_013362640 MODEL 8906986 protein-coding Kif22 kinesin family member 22 INVOLVED IN metaphase chromosome alignment (ortholog); mitotic metaphase chromosome alignment (ortholog); sister chromatid cohesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); mitotic spindle (ortholog); nuclear speck (ortholog) NW_004955493 7155307 7173576 - 102008119 AGCD01061157;GBDJ01025840;XM_013504774 XP_013360228 MODEL 8707232 protein-coding Asic5 acid sensing ion channel subunit family member 5 ENCODES a protein that exhibits bile acid-gated sodium channel activity (ortholog); ligand-gated sodium channel activity (ortholog); proton channel activity (ortholog); INVOLVED IN neuronal action potential (ortholog); sodium ion import across plasma membrane (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Habitual Abortions (ortholog); thymoma (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955471 11262213 11287720 + 102014131 AGCD01053251;XM_005400949 XP_005401006 MODEL 9040258 pseudo LOC102010074 mortality factor 4-like protein 1 pseudogene NW_004955427 22903386 22904350 - 102010074 AGCD01027478 MODEL 39132357 snrna U6 U6 spliceosomal RNA 39134198 misc_rna 7SK 7SK RNA 8925140 protein-coding CUNH17orf107 chromosome unknown C17orf107 homolog ASSOCIATED WITH congenital myasthenic syndrome (ortholog) NW_004955467 10313693 10314724 + 102020788 AGCD01051558;GBDF01005267;XM_005399618 XP_005399675 MODEL 8895854 protein-coding Henmt1 HEN methyltransferase 1 ENCODES a protein that exhibits O-methyltransferase activity (ortholog); RNA methyltransferase activity (ortholog); small RNA 2'-O-ribose methyltransferase activity (ortholog); INVOLVED IN piRNA processing (ortholog); RNA methylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); azoospermia (ortholog); cholangiocarcinoma (ortholog) NW_004955435 12137537 12154630 - 102019198 AGCD01033134;GBDF01080585;GBDF01080593;XM_005388830;XM_005388831 XP_005388887;XP_005388888 MODEL 8764228 protein-coding Hnrnpl heterogeneous nuclear ribonucleoprotein L ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA CDS binding (ortholog); pre-mRNA intronic binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); brain cancer (ortholog); Breast Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955468 668177 683540 + 102007877 AGCD01051724;AGCD01051725;GBCQ01011897;XM_005399824;XM_005399826;XM_005399828 XP_005399881;XP_005399883;XP_005399885 MODEL 8793843 protein-coding LOC102007810 glutathione S-transferase Mu 2 NW_004955435 13099385 13175462 + 102007810 AGCD01033184;AGCD01033185;AGCD01033186;AGCD01033187;AGCD01033188;AGCD01033189;AGCD01033190;AGCD01033191;AGCD01033192;AGCD01033193;GBCE01002116;GBDI01010302;XM_005388888 XP_005388945 MODEL 8745613 protein-coding Nup160 nucleoporin 160 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); nephron development (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear pore (ortholog) NW_004955422 561339 598598 + 102017026 AGCD01022416;GBDK01278983;XM_005383952 XP_005384009 MODEL 8934546 protein-coding LOC102005263 E3 ubiquitin-protein ligase TRIM38-like NW_004955483 1063852 1071092 + 102005263 AGCD01057639;XM_013503764 XP_013359218 MODEL 39134199 misc_rna 7SK 7SK RNA 8747589 protein-coding Gak cyclin G associated kinase ENCODES a protein that exhibits cyclin binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cell development (ortholog); clathrin coat assembly (ortholog); clathrin coat disassembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); Golgi apparatus (ortholog); vesicle (ortholog) NW_004955514 391305 434198 - 102010398 AGCD01067009;AGCD01067010;GBDI01067926;XM_005408682;XM_005408684;XM_013506753;XM_013506754 XP_005408739;XP_005408741;XP_013362207;XP_013362208 MODEL 39132424 rrna 5S_rRNA 5S ribosomal RNA 8814827 ncrna LOC102003538 uncharacterized LOC102003538 NW_004955476 203227 208111 + 102003538 AGCD01055192;GBDI01270308;XR_263615 MODEL 8832637 ncrna LOC102024533 uncharacterized LOC102024533 NW_004955408 35437922 35476125 - 102024533 AGCD01008943;AGCD01008944;AGCD01008945;AGCD01008946;GBDJ01064858;XR_259733 MODEL 9020557 ncrna LOC102004925 uncharacterized LOC102004925 NW_004955478 8969460 9024925 - 102004925 AGCD01056049;GBBH01155294;XR_001230860;XR_001230861;XR_001230862;XR_001230863;XR_263711 MODEL 8870140 protein-coding Daam2 dishevelled associated activator of morphogenesis 2 INVOLVED IN determination of left/right symmetry (ortholog); dorsal spinal cord development (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955437 6728703 6839903 + 102030565 AGCD01034443;AGCD01034444;GBDI01353991;XM_005389656;XM_005389657;XM_013516989;XM_013516990 XP_005389713;XP_005389714;XP_013372443;XP_013372444 MODEL 8939787 pseudo LOC102025240 ATP-binding cassette sub-family A member 8-B-like NW_004955478 3891326 3947184 + 102025240 AGCD01055834;AGCD01055835;AGCD01055836;XM_005402290 MODEL 9043830 ncrna LOC102012030 uncharacterized LOC102012030 NW_004955442 16080957 16097609 + 102012030 AGCD01037891;GBDF01225468;XR_262160;XR_262161 MODEL 8790886 protein-coding Setx senataxin ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-3' DNA/RNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to oxidative stress (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 4 (ortholog); FOUND IN axon (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955513 1718432 1776133 - 102026139 AGCD01066862;GBDK01147152;GBDK01147154;XM_005408377 XP_005408434 MODEL 8814534 ncrna LOC102018091 uncharacterized LOC102018091 NW_004955416 30012956 30018288 + 102018091 AGCD01017675;GBDF01066665;XR_260438 MODEL 9017356 protein-coding Trps1 transcriptional repressor GATA binding 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); chondrocyte differentiation (ortholog); hair follicle development (ortholog); ASSOCIATED WITH alopecia areata (ortholog); Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 21674545 21913137 - 102028191 AGCD01018402;AGCD01018403;AGCD01018404;AGCD01018405;AGCD01018406;GBCQ01151050;XM_005381890;XM_005381891;XM_005381893;XM_013512789;XM_013512790;XM_013512791;XM_013512792;XM_013512793 XP_005381947;XP_005381948;XP_005381950;XP_013368243;XP_013368244;XP_013368245;XP_013368246;XP_013368247 MODEL 9011464 protein-coding Snx10 sorting nexin 10 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); ATPase binding (ortholog); INVOLVED IN bone mineralization involved in bone maturation (ortholog); bone remodeling (ortholog); bone resorption (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive osteopetrosis 8 (ortholog); cervical cancer (ortholog); FOUND IN apical cytoplasm (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955410 28137426 28178814 + 102025219 AGCD01011242;AGCD01011243;AGCD01011244;GBBH01006766;GBCQ01123481;XM_013510607 XP_013366061 MODEL 8823539 pseudo LOC102021458 60S ribosomal protein L27 pseudogene NW_004955494 2795835 2796269 - 102021458 AGCD01061451 MODEL 8873584 pseudo LOC102006312 uncharacterized LOC102006312 NW_004955454 13491911 13530089 - 102006312 AGCD01045438;AGCD01045439;AGCD01045440;AGCD01045441;AGCD01045442;AGCD01045443;AGCD01045444 MODEL 9060125 protein-coding Mkx mohawk homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); collagen fibril organization (ortholog); intratendonous ossification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Heterotopic Ossification (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955462 1564739 1631613 - 102013062 AGCD01049127;AGCD01049128;AGCD01049129;AGCD01049130;AGCD01049131;GBCE01137459;XM_005398100;XM_005398101;XM_005398102;XM_005398103;XM_013521473;XM_013521474;XM_013521475 XP_005398157;XP_005398158;XP_005398159;XP_005398160;XP_013376927;XP_013376928;XP_013376929 MODEL 8790792 protein-coding Mxd4 MAX dimerization protein 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955514 1348602 1358092 - 102022629 AGCD01067047;AGCD01067048;GBCE01054691;XM_005408726 XP_005408783 MODEL 8986245 protein-coding Ndufb10 NADH:ubiquinone oxidoreductase subunit B10 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955442 15306688 15309281 - 102013454 AGCD01037865;GBDK01080205;XM_005391494 XP_005391551 MODEL 10248280 ncrna LOC106150070 uncharacterized LOC106150070 NW_004955402 15617190 15625928 - 106150070 AGCD01000460;GBCQ01183809;XR_001236654 MODEL 8943853 protein-coding Nabp2 nucleic acid binding protein 2 ENCODES a protein that exhibits C-rich strand telomeric DNA binding (ortholog); DNA polymerase binding (ortholog); G-rich strand telomeric DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955458 3835205 3836841 + 102027383 AGCD01047350;GBCQ01064071;XM_013520830 XP_013376284 MODEL 8907865 protein-coding Wdr47 WD repeat domain 47 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior commissure morphogenesis (ortholog); autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955435 12414964 12479883 - 102022322 AGCD01033147;AGCD01033148;GBDI01324335;XM_005388841;XM_013516532;XM_013516533;XM_013516534;XM_013516535;XM_013516536 XP_005388898;XP_013371986;XP_013371987;XP_013371988;XP_013371989;XP_013371990 MODEL 10313141 pseudo LOC106149280 methylosome subunit pICln pseudogene NW_004955442 3242039 3243148 - 106149280 AGCD01037501 MODEL 9045377 protein-coding Glrx2 glutaredoxin 2 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to superoxide (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN dendrite (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955406 30497562 30506463 - 102020304 AGCD01006369;AGCD01006370;GBDK01280440;XM_005375105 XP_005375162 MODEL 39134504 misc_rna 7SK 7SK RNA 8777378 ncrna LOC102003152 uncharacterized LOC102003152 NW_004955495 7582405 7586650 + 102003152 AGCD01062154;XR_264168 MODEL 8744881 protein-coding Ddx53 DEAD-box helicase 53 FOUND IN nucleoplasm (ortholog) NW_004955509 3352639 3354949 + 102012786 AGCD01066020;GBDF01118543;XM_013506291 XP_013361745 MODEL 8734564 pseudo LOC102023519 microtubule-associated protein 9-like NW_004955435 7164130 7166416 + 102023519 AGCD01032948 MODEL 9011044 protein-coding LOC102010856 uncharacterized LOC102010856 NW_004955650 98638 101158 + 102010856 AGCD01077799;GBDJ01149179;XM_005415052;XR_001232591 XP_005415109 MODEL 8734707 protein-coding Ptges prostaglandin E synthase ENCODES a protein that exhibits glutathione binding (ortholog); glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN cellular response to resveratrol (ortholog); chronic inflammatory response (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Barrett's esophagus (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955445 10053745 10056981 + 102028350 AGCD01039640;XM_005392576 XP_005392633 MODEL 8987178 protein-coding Glrx3 glutaredoxin 3 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); identical protein binding (ortholog); iron-sulfur cluster chaperone activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); cell redox homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiomegaly (ortholog); cervical cancer (ortholog); FOUND IN dendrite (ortholog); iron-sulfur cluster assembly complex (ortholog); Z disc (ortholog) NW_004955477 7715257 7748913 + 102020563 AGCD01055618;AGCD01055619;GBDF01001098;XM_005402031 XP_005402088 MODEL 9015417 protein-coding Fkbp1b FKBP prolyl isomerase 1B ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium channel regulator activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); insulin secretion (ortholog); negative regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); FOUND IN calcium channel complex (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955469 6263271 6274823 + 102023893 AGCD01052376;GBCB01028793;GBDF01063636;XM_005400373 XP_005400430 MODEL 8857547 pseudo LOC102008915 R-spondin-3 pseudogene NW_004955406 6122483 6124674 - 102008915 AGCD01005744 MODEL 8769715 protein-coding Nup188 nucleoporin 188 INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cataract (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955570 1312998 1369513 + 102013022 AGCD01074808;AGCD01074809;AGCD01074810;AGCD01074811;AGCD01074812;GBDF01002410;XM_005413601;XM_005413602 XP_005413658;XP_005413659 MODEL 9030420 protein-coding Hnrnpll heterogeneous nuclear ribonucleoprotein L like ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of RNA splicing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN synapse (ortholog) NW_004955441 6229692 6269051 - 102010414 AGCD01036907;AGCD01036908;GBDI01216597;XM_013517617 XP_013373071 MODEL 8924114 protein-coding LOC102018096 serine/threonine-protein phosphatase 6 regulatory subunit 1 NW_004955483 7973276 8000527 + 102018096 AGCD01057823;GBDI01008367;GBDI01008376;XM_005403389;XM_005403390;XM_013503822;XM_013503823 XP_005403446;XP_005403447;XP_013359276;XP_013359277 MODEL 9049585 protein-coding Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog) NW_004955514 3698644 3699227 - 102008971 AGCD01067105;GBCE01116712;GBDF01001526;XM_013506813 XP_013362267 MODEL 8966444 protein-coding Plekha7 pleckstrin homology domain containing A7 ENCODES a protein that exhibits delta-catenin binding (ortholog); INVOLVED IN cell-cell adhesion mediated by cadherin (ortholog); epithelial cell-cell adhesion (ortholog); pore complex assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH angle-closure glaucoma (ortholog); Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); centrosome (ortholog) NW_004955414 31655391 31784009 - 102006236 AGCD01015759;AGCD01015760;GBCE01009822;XM_005380369;XM_013511964;XM_013511965;XM_013511966;XM_013511967 XP_005380426;XP_013367418;XP_013367419;XP_013367420;XP_013367421 MODEL 39131743 rrna 5S_rRNA 5S ribosomal RNA 8704601 protein-coding Bard1 BRCA1 associated RING domain 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to ionizing radiation (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-B complex (ortholog); BRCA1-BARD1 complex (ortholog) NW_004955457 1187942 1258475 + 102020764 AGCD01046721;AGCD01046722;GBDF01159748;XM_005396916 XP_005396973 MODEL 8863795 protein-coding Fam53b family with sequence similarity 53 member B INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN nucleus (ortholog) NW_004955477 2609431 2725001 - 102003542 AGCD01055525;GBBH01117110;XM_005401975;XM_005401977;XM_013503079 XP_005402032;XP_005402034;XP_013358533 MODEL 8933107 protein-coding LOC102005950 cytochrome P450 2C55 NW_004955507 1146694 1227783 + 102005950 AGCD01065516;AGCD01065517;AGCD01065518;AGCD01065519;AGCD01065520;AGCD01065521;AGCD01065522;AGCD01065523;AGCD01065524;AGCD01065525;AGCD01065526;GBDI01308871;XM_005407534;XM_013506231 XP_005407591;XP_013361685 MODEL 8826401 protein-coding LOC102003539 protocadherin beta-10 NW_004955415 12555720 12609335 - 102003539 AGCD01016200;AGCD01016201;AGCD01016202;AGCD01016203;AGCD01016204;AGCD01016205;AGCD01016206;GBCE01115691;GBDF01153200;XM_013512254 XP_013367708 MODEL 8750188 protein-coding Mlana melan-A ASSOCIATED WITH contact dermatitis (ortholog); malignant mesothelioma (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); melanosome (ortholog) NW_004955434 9877301 9893079 + 102005167 AGCD01032313;GBDJ01242841;XM_005388666 XP_005388723 MODEL 39132359 snrna U6 U6 spliceosomal RNA 8896919 protein-coding Iqgap3 IQ motif containing GTPase activating protein 3 ENCODES a protein that exhibits calmodulin binding (ortholog); myosin VI light chain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); lateral plasma membrane (ortholog) NW_004955545 2627334 2663786 - 102003382 AGCD01071914;AGCD01071915;GBDK01080432;XM_005411682;XM_013508311 XP_005411739;XP_013363765 MODEL 8742549 protein-coding Wdr48 WD repeat domain 48 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); embryonic organ development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955427 24873616 24917691 - 102026998 AGCD01027525;GBDF01050505;XM_005386566;XM_005386567;XM_013515075 XP_005386623;XP_005386624;XP_013370529 MODEL 8786479 protein-coding Hepacam hepatic and glial cell adhesion molecule INVOLVED IN protein localization to cell-cell junction (ortholog); ASSOCIATED WITH Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN astrocyte end-foot (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955412 25981235 25998296 - 102016462 AGCD01013183;GBBH01057749;XM_005378447;XM_013510951 XP_005378504;XP_013366405 MODEL 8991085 protein-coding Dab1 DAB adaptor protein 1 ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration (ortholog); cerebellum structural organization (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog); FOUND IN apical part of cell (ortholog); brush border (ortholog); cytoplasm (ortholog) NW_004955464 2325529 2721497 + 102019784 AGCD01049964;AGCD01049965;GBDI01207950;XM_013521740;XM_013521741;XM_013521743;XM_013521744;XM_013521745 XP_013377194;XP_013377195;XP_013377197;XP_013377198;XP_013377199 MODEL 8875611 ncrna LOC102012033 uncharacterized LOC102012033 NW_004955444 1600025 1605604 + 102012033 AGCD01038732;GBDF01041654;XR_001235529 MODEL 8850638 ncrna LOC102007811 uncharacterized LOC102007811 NW_004955436 506358 507779 - 102007811 AGCD01033545;GBCB01129963;XR_261734 MODEL 39134072 misc_rna 7SK 7SK RNA 8980950 ncrna LOC102012432 uncharacterized LOC102012432 NW_004955418 28369715 28371889 + 102012432 AGCD01019436;GBDF01147816;XR_260592 MODEL 8891322 protein-coding Snx11 sorting nexin 11 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); INVOLVED IN vesicle organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); plasma membrane (ortholog) NW_004955451 13051649 13060479 - 102008910 AGCD01043444;GBCE01136669;XM_005394248;XM_013519425;XM_013519426;XM_013519427 XP_005394305;XP_013374879;XP_013374880;XP_013374881 MODEL 8788375 pseudo LOC102007463 60S ribosomal protein L21 pseudogene NW_004955434 3733419 3736535 - 102007463 AGCD01032143 MODEL 8982585 protein-coding Trpt1 tRNA phosphotransferase 1 ENCODES a protein that exhibits tRNA 2'-phosphotransferase activity (ortholog); INVOLVED IN regulation of protein kinase activity (ortholog); tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955422 20851806 20854349 + 102020577 AGCD01023095;GBDF01118758;XM_005384638;XM_005384641;XM_013513959 XP_005384695;XP_005384698;XP_013369413 MODEL 8810068 protein-coding Gal galanin and GMAP prepropeptide ENCODES a protein that exhibits galanin receptor activity (ortholog); neuropeptide hormone activity (ortholog); type 1 galanin receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); behavioral response to ethanol (ortholog); drinking behavior (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); brain ischemia (ortholog); FOUND IN neuron projection terminus; perikaryon; extracellular region (ortholog) NW_004955422 17202770 17207948 - 102018408 AGCD01022914;GBDI01071823;XM_013513881 XP_013369335 MODEL 8863634 protein-coding Gpc6 glypican 6 INVOLVED IN cell migration (ortholog); regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) NW_004955404 15429811 16504973 - 102029256 AGCD01003543;AGCD01003544;AGCD01003545;AGCD01003546;AGCD01003547;AGCD01003548;AGCD01003549;AGCD01003550;AGCD01003551;AGCD01003552;AGCD01003553;AGCD01003554;AGCD01003555;AGCD01003556;AGCD01003557;AGCD01003558;AGCD01003559;AGCD01003560;AGCD01003561;GBCE01054960;XM_005374116 XP_005374173 MODEL 10372038 ncrna LOC106150071 uncharacterized LOC106150071 NW_004955463 7134697 7135321 - 106150071 AGCD01049719;GBBH01172741;XR_001236653 MODEL 8928916 protein-coding Asip agouti signaling protein ENCODES a protein that exhibits melanocortin receptor binding (ortholog); receptor antagonist activity (ortholog); type 1 melanocortin receptor binding (ortholog); INVOLVED IN adult feeding behavior (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; melanocortin system pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); coat/hair pigmentation trait (ortholog); dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 27021810 27150339 - 102024692 AGCD01023311;AGCD01023312;AGCD01023313;GBDJ01318713;XM_005384833;XM_005384834 XP_005384890;XP_005384891 MODEL 8958041 protein-coding Naca nascent polypeptide associated complex subunit alpha ENCODES a protein that exhibits TBP-class protein binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN myoblast migration (ortholog); negative regulation of protein localization to endoplasmic reticulum (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nascent polypeptide-associated complex (ortholog); nucleus (ortholog) NW_004955458 4251679 4265430 - 102014422 AGCD01047394;AGCD01047395;AY533209;GBDI01010587;NM_001282372;XM_013520786 AAS59412;NP_001269301;Q6QN10;XP_013376240 VALIDATED 8941499 ncrna LOC102004928 uncharacterized LOC102004928 NW_004955417 31446138 31470576 + 102004928 AGCD01018652;GBDI01165806;XR_001233455 MODEL 8730209 pseudo LOC102013556 calmodulin-like NW_004955442 9087589 9088397 + 102013556 AGCD01037662 MODEL 8985341 protein-coding Cspg5 chondroitin sulfate proteoglycan 5 INVOLVED IN axon regeneration (ortholog); cytoskeleton organization (ortholog); glial cell projection elongation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) NW_004955420 24735155 24746580 + 102005267 AGCD01021330;GBBH01026157;GBCB01038512;XM_013513391;XM_013513392 XP_013368845;XP_013368846 MODEL 10354872 ncrna LOC106147132 uncharacterized LOC106147132 NW_004955521 2576473 2601324 + 106147132 AGCD01068209;AGCD01068210;GBBH01083125;XR_001231889 MODEL 8896744 protein-coding LOC102023521 HLA class II histocompatibility antigen, DM beta chain ENCODES a protein that exhibits MHC class II protein complex binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); MHC class II protein complex assembly (ortholog); peptide antigen assembly with MHC class II protein complex (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); MHC class II protein complex (ortholog) NW_004955437 1544906 1551412 - 102023521 AGCD01034216;GBBH01000778;GBDI01007415;XM_013517006 XP_013372460 MODEL 9015783 protein-coding Sez6 seizure related 6 homolog INVOLVED IN activation of protein kinase C activity (ortholog); adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Childhood Schizophrenia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) NW_004955481 4175637 4220809 + 102017336 AGCD01056932;GBBH01109329;XM_005402699;XM_005402700;XM_005402701;XM_005402702;XM_013503418 XP_005402756;XP_005402757;XP_005402758;XP_005402759;XP_013358872 MODEL 8772773 pseudo LOC102022792 histone H2A.V-like NW_004955460 12659699 12660353 - 102022792 AGCD01048661;XR_263069 MODEL 8786628 protein-coding LOC102021461 tubulin alpha-1C chain-like NW_004955499 193636 205355 + 102021461 AGCD01063193;AGCD01063194;AGCD01063195;AGCD01063196;AGCD01063197;XM_013505550 XP_013361004 MODEL 39131592 rrna 5S_rRNA 5S ribosomal RNA 8970209 pseudo LOC102010080 protein MEMO1-like NW_004955429 4415409 4416220 + 102010080 AGCD01028489 MODEL 8843475 ncrna LOC102024534 uncharacterized LOC102024534 NW_004955458 13179440 13185896 + 102024534 AGCD01047796;GBDF01253149;XR_262996 MODEL 8976262 protein-coding Plekha8 pleckstrin homology domain containing A8 ENCODES a protein that exhibits ceramide binding (ortholog); cerebroside transfer activity (ortholog); glycolipid binding (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); globoside biosynthetic process (ortholog); glycolipid transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cis-Golgi network membrane (ortholog); nucleoplasm (ortholog); trans-Golgi network (ortholog) NW_004955410 31327015 31386671 + 102017751 AGCD01011321;AGCD01011322;AGCD01011323;GBDF01087012;XM_005377490;XM_013510617 XP_005377547;XP_013366071 MODEL 39134505 misc_rna 7SK 7SK RNA 8724873 protein-coding CUNH17orf50 chromosome unknown C17orf50 homolog FOUND IN nucleoplasm (ortholog) NW_004955481 10202477 10206606 + 102018728 AGCD01057138;GBDK01256624;XM_005402884 XP_005402941 MODEL 8904983 protein-coding LOC102007821 N-formyl peptide receptor 2 NW_004955558 780076 787914 - 102007821 AGCD01073389;AGCD01073390;GBDI01325712;XM_005412670;XM_013508870;XM_013508871 XP_005412727;XP_013364324;XP_013364325 MODEL 8989693 pseudo LOC102025241 U6 snRNA-associated Sm-like protein LSm3 pseudogene NW_004955480 8692235 8697603 - 102025241 AGCD01056730 MODEL 8848557 protein-coding Gal3st1 galactose-3-O-sulfotransferase 1 ENCODES a protein that exhibits galactosylceramide sulfotransferase activity (ortholog); INVOLVED IN galactosylceramide biosynthetic process (ortholog); galactosylceramide metabolic process (ortholog); glycerolipid metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955455 4771378 4794085 - 102023979 AGCD01045688;GBCQ01069004;XM_005396272;XM_005396273;XM_005396274;XM_005396275;XM_005396276 XP_005396329;XP_005396330;XP_005396331;XP_005396332;XP_005396333 MODEL 39132360 snrna U6 U6 spliceosomal RNA 8961068 protein-coding LOC102005270 uncharacterized LOC102005270 NW_004955494 876724 895412 - 102005270 AGCD01061387;AGCD01061388;GBDI01038326;XM_013505014;XR_001231324;XR_001231325;XR_001231326;XR_001231327 XP_013360468 MODEL 10218804 protein-coding LOC106150072 uncharacterized LOC106150072 NW_004955463 14164310 14216186 + 106150072 AGCD01049902;AGCD01049903;AGCD01049904;AGCD01049905;GBDK01372738;XM_013521568 XP_013377022 MODEL 39132428 rrna 5S_rRNA 5S ribosomal RNA 8896166 protein-coding Ddx54 DEAD-box helicase 54 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); RNA helicase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN RNA metabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955482 9493840 9509916 - 102014566 AGCD01057574;GBCB01043534;XM_005403214;XM_013503585;XM_013503586;XM_013503587 XP_005403271;XP_013359039;XP_013359040;XP_013359041 MODEL 8725629 protein-coding Ptges2 prostaglandin E synthase 2 ENCODES a protein that exhibits 12-hydroxyheptadecatrienoic acid synthase activity (ortholog); DNA binding (ortholog); lyase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); lipid metabolic process (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN prostaglandin biosynthetic pathway; type II interferon signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); Carbon Tetrachloride Poisoning (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrion (ortholog) NW_004955419 608313 612813 + 102017772 AGCD01019598;GBDF01127195;XM_005382381 XP_005382438 MODEL 9051791 protein-coding LOC102006314 keratin-associated protein 20-2-like NW_004955407 30126888 30127076 + 102006314 AGCD01007628;XM_005375638 XP_005375695 MODEL 8860731 protein-coding LOC102008917 keratin-associated protein 20-2-like NW_004955407 30198704 30198859 + 102008917 AGCD01007628;XM_005375646 XP_005375703 MODEL 9038918 protein-coding Hepacam2 HEPACAM family member 2 INVOLVED IN centrosome cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955432 10088162 10128169 - 102008340 AGCD01030925;AGCD01030926;AGCD01030927;GBCQ01154442;XM_005388031;XM_005388032;XM_005388033;XM_005388034;XM_013515908 XP_005388088;XP_005388089;XP_005388090;XP_005388091;XP_013371362 MODEL 39134073 misc_rna 7SK 7SK RNA 9024240 protein-coding Mxi1 MAX interactor 1, dimerization protein ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast adenocarcinoma (ortholog); cervical cancer (ortholog); FOUND IN Mad-Max complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955485 1088175 1156521 - 102016599 AGCD01058470;AGCD01058471;GBCB01056767;XM_005403756;XM_013504111 XP_005403813;XP_013359565 MODEL 9045202 protein-coding Hnrnpm heterogeneous nuclear ribonucleoprotein M ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein antigen binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to carcinoembryonic antigen (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cell surface (ortholog); glutamatergic synapse (ortholog) NW_004955563 933824 975064 - 102012034 AGCD01074097;AGCD01074098;AGCD01074099;GBCE01000963;XM_005413119;XM_005413121;XM_005413122;XM_005413123;XM_005413124;XM_005413125;XM_013509137 XP_005413176;XP_005413178;XP_005413179;XP_005413180;XP_005413181;XP_005413182;XP_013364591 MODEL 8993830 protein-coding Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); developmental pigmentation (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 11 (ortholog); FOUND IN BLOC-1 complex (ortholog); microvesicle (ortholog); transport vesicle (ortholog) NW_004955465 5910095 5943996 + 102025889 AGCD01050435;AGCD01050436;GBCQ01069346;XM_005398846;XM_005398848 XP_005398903;XP_005398905 MODEL 8717066 protein-coding Kif23 kinesin family member 23 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centralspindlin complex (ortholog); centrosome (ortholog); Flemming body (ortholog) NW_004955450 7060240 7083818 - 102004769 AGCD01042531;AGCD01042532;GBDF01086111;XM_005393877;XM_013519019;XM_013519020;XM_013519021 XP_005393934;XP_013374473;XP_013374474;XP_013374475 MODEL 8972701 protein-coding Barhl1 BarH like homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN midbrain development (ortholog); negative regulation of neuron apoptotic process (ortholog); neuron migration (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Hearing Loss (ortholog); high grade glioma (ortholog); FOUND IN nucleus (ortholog) NW_004955513 1955906 1970110 + 102022526 AGCD01066866;AGCD01066867;GBBH01063530;GBDJ01269024;XM_013506597 XP_013362051 MODEL 8780663 ncrna LOC102005951 uncharacterized LOC102005951 NW_004955429 3029946 3056828 + 102005951 AGCD01028449;AGCD01028450;AGCD01028451;AGCD01028452;AGCD01028453;AGCD01028454;GBDF01054382;XR_261312 MODEL 10215755 pseudo LOC106149281 small nuclear ribonucleoprotein-associated protein B-like NW_004955442 16743630 16745874 + 106149281 AGCD01037907 MODEL 8992267 pseudo LOC102003541 60S acidic ribosomal protein P1 pseudogene NW_004955416 7907212 7907681 + 102003541 AGCD01017018;XM_005381274 MODEL 9041715 protein-coding LOC102010858 heterogeneous nuclear ribonucleoprotein U-like protein 2 NW_004957878 562 1192 + 102010858 AGCD01081274;XM_005415235 XP_005415292 MODEL 9028787 protein-coding LOC102010081 vomeronasal secretory protein 2-like NW_004955513 2601129 2609926 + 102010081 AGCD01066882;AGCD01066883;GBDF01023674;XM_005408421;XM_005408422;XM_013506591 XP_005408478;XP_005408479;XP_013362045 MODEL 9063794 protein-coding Wdr49 WD repeat domain 49 ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955448 16701241 16840180 - 102011823 AGCD01041701;AGCD01041702;AGCD01041703;GBDK01313375;XM_013518658;XM_013518659;XM_013518660;XM_013518661;XM_013518662;XM_013518663 XP_013374112;XP_013374113;XP_013374114;XP_013374115;XP_013374116;XP_013374117 MODEL 8913244 protein-coding Asl argininosuccinate lyase ENCODES a protein that exhibits argininosuccinate lyase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); ammonia assimilation cycle (ortholog); arginine metabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); argininosuccinic aciduria (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell body fiber (ortholog); mitochondrial outer membrane (ortholog); neuronal cell body (ortholog) NW_004955456 8409767 8419915 - 102005227 AGCD01046476;AGCD01046477;AGCD01046478;GBDJ01008461;GBDJ01008463;XM_013520597 XP_013376051 MODEL 8718562 ncrna LOC102013560 uncharacterized LOC102013560 NW_004955443 13036898 13044656 - 102013560 AGCD01038459;GBDF01022385;XR_262205 MODEL 8836173 protein-coding Dab2 DAB adaptor protein 2 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); cargo receptor activity (ortholog); clathrin binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); cholangiocarcinoma (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN apical plasma membrane (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) NW_004955426 23852752 23883030 - 102010924 AGCD01026658;AGCD01026659;GBBH01006783;GBCE01028917;XM_013514991 XP_013370445 MODEL 8863321 protein-coding Glrx5 glutaredoxin 5 ENCODES a protein that exhibits iron-sulfur cluster chaperone activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); erythrocyte differentiation (ortholog); protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH autosomal recessive pyridoxine-refractory sideroblastic anemia 2 (ortholog); autosomal recessive pyridoxine-refractory sideroblastic anemia 3 (ortholog); Childhood-Onset Spasticity with Hyperglycinemia (ortholog); FOUND IN dendrite (ortholog); iron-sulfur cluster assembly complex (ortholog); mitochondrial matrix (ortholog) NW_004955438 17067017 17076162 - 102015982 AGCD01035430;GBBH01092204;XM_005390376 XP_005390433 MODEL 8730198 pseudo LOC102012039 creatine kinase U-type, mitochondrial pseudogene NW_004955447 18787639 18792112 - 102012039 AGCD01041191 MODEL 9051926 protein-coding Cspp1 centrosome and spindle pole associated protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of cell division (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); spindle (ortholog) NW_004955444 12111375 12217065 - 102009430 AGCD01039060;AGCD01039061;AGCD01039062;AGCD01039063;GBCE01008113;XM_005392126;XM_005392127;XM_005392128;XM_005392129;XM_005392130;XM_005392131;XM_005392132;XM_005392135;XM_013518153;XM_013518154;XM_013518155;XR_262258 XP_005392183;XP_005392184;XP_005392185;XP_005392186;XP_005392187;XP_005392188;XP_005392189;XP_005392192;XP_013373607;XP_013373608;XP_013373609 MODEL 9024838 protein-coding Nup205 nucleoporin 205 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN nuclear pore complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nuclear periphery (ortholog) NW_004955494 7084150 7148264 - 102009728 AGCD01061545;GBCC01053978;XM_005405474;XM_013504999;XM_013505000 XP_005405531;XP_013360453;XP_013360454 MODEL 8974771 pseudo LOC102012433 calcyclin-binding protein pseudogene NW_004955419 25409135 25411025 - 102012433 AGCD01020385 MODEL 9020884 pseudo LOC102018098 dnaJ homolog subfamily A member 1 pseudogene NW_004955420 13182480 13183950 + 102018098 AGCD01020916 MODEL 8786955 ncrna LOC102006319 uncharacterized LOC102006319 NW_004955460 7406510 7414067 - 102006319 AGCD01048481;XR_263037 MODEL 8847120 ncrna LOC102008918 uncharacterized LOC102008918 NW_004955408 4765453 4769584 - 102008918 AGCD01008118;GBDF01188494;XR_259660 MODEL 8899671 protein-coding LOC102003153 CD70 antigen-like NW_004955495 2876196 2880324 + 102003153 AGCD01061808;GBDF01041568;XM_013505052 XP_013360506 MODEL 8917734 protein-coding Trpv1 transient receptor potential cation channel subfamily V member 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel activity (ortholog); calmodulin binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); external side of plasma membrane (ortholog) NW_004955467 13221391 13239089 + 102022802 AGCD01051668;AGCD01051669;XM_005399725 XP_005399782 MODEL 8911970 protein-coding Gpcpd1 glycerophosphocholine phosphodiesterase 1 ENCODES a protein that exhibits glycerophosphocholine phosphodiesterase activity (ortholog); INVOLVED IN skeletal muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955415 16062068 16118029 - 102012532 AGCD01016366;AGCD01016367;AGCD01016368;AGCD01016369;AGCD01016370;GBCB01020026;XM_013512296;XM_013512297;XM_013512298;XM_013512300 XP_013367750;XP_013367751;XP_013367752;XP_013367754 MODEL 9007953 protein-coding Mlc1 modulator of VRAC current 1 ENCODES a protein that exhibits identical protein binding (ortholog); monoatomic ion channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN caveolin-mediated endocytosis (ortholog); cellular response to cholesterol (ortholog); monoatomic ion transmembrane transport (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte end-foot (ortholog); basolateral plasma membrane (ortholog) NW_004955413 33120426 33142149 - 102019260 AGCD01014656;GBDK01200764;XM_005379535;XM_005379537;XM_013511674;XM_013511675 XP_005379592;XP_005379594;XP_013367128;XP_013367129 MODEL 39134506 misc_rna 7SK 7SK RNA 8889940 protein-coding Fkbp2 FKBP prolyl isomerase 2 NW_004955422 20834741 20837594 - 102017784 AGCD01023092;GBBH01031180;XM_005384627;XM_005384628;XM_005384630;XM_005384631;XM_005384632 XP_005384684;XP_005384685;XP_005384687;XP_005384688;XP_005384689 MODEL 8783810 protein-coding Ndufb11 NADH:ubiquinone oxidoreductase subunit B11 ASSOCIATED WITH dystonia (ortholog); genetic disease (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955516 934740 937207 + 102022320 AGCD01067406;GBDJ01023277;XM_005408963 XP_005409020 MODEL 10106591 ncrna LOC106147133 uncharacterized LOC106147133 NW_004955521 4272009 4282495 - 106147133 AGCD01068259;XR_001231890 MODEL 8796530 ncrna LOC102023525 uncharacterized LOC102023525 NW_004955540 764227 796200 - 102023525 AGCD01071286;AGCD01071287;GBDK01357828;XR_001232114;XR_264815 MODEL 8924495 pseudo LOC102007465 GPALPP motifs-containing protein 1 pseudogene NW_004955436 21483145 21488677 - 102007465 AGCD01034055 MODEL 8830336 protein-coding Gls glutaminase ENCODES a protein that exhibits glutaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); intracellular glutamate homeostasis (ortholog); L-glutamate biosynthetic process (ortholog); ASSOCIATED WITH Ataxia (ortholog); CASGID syndrome (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955403 8195241 8261402 - 102028486 AGCD01001869;AGCD01001870;AGCD01001871;AGCD01001872;AGCD01001873;GBDJ01423953;XM_005373298;XM_013512252 XP_005373355;XP_013367706 MODEL 8958562 protein-coding Ptges3 prostaglandin E synthase 3 ENCODES a protein that exhibits DNA polymerase binding (ortholog); enzyme binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN cell population proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955458 4203075 4209967 - 102013802 AGCD01047385;GBDI01002083;GBDJ01074687;XM_005397329 XP_005397386 MODEL 39134074 misc_rna 7SK 7SK RNA 8905788 protein-coding Heph hephaestin ENCODES a protein that exhibits ferroxidase activity (ortholog); INVOLVED IN intestinal iron absorption (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); positive regulation of iron export across plasma membrane (ortholog); PARTICIPATES IN iron efflux pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); glaucoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955475 5625177 5704234 + 102010578 AGCD01054924;AGCD01054925;GBCE01090210;XM_005401575;XM_005401576;XM_005401577;XM_005401578;XM_013502889;XM_013502890 XP_005401632;XP_005401633;XP_005401634;XP_005401635;XP_013358343;XP_013358344 MODEL 39131593 rrna 5S_rRNA 5S ribosomal RNA 8836777 protein-coding Nacad NAC alpha domain containing ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955456 7224224 7230736 + 102007737 AGCD01046399;AGCD01046400;AGCD01046401;GBDF01081250;GBDJ01016807;XM_013520513 XP_013375967 MODEL 8874933 protein-coding Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ENCODES a protein that exhibits actin filament binding (ortholog); AP-3 adaptor complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); adenosine metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 1 (ortholog); FOUND IN actin filament (ortholog); axon terminus (ortholog); BLOC-1 complex (ortholog) NW_004955409 7902125 7913966 - 102019250 AGCD01009369;GBBH01116617;XM_005376726;XM_005376727 XP_005376783;XP_005376784 MODEL 8830531 protein-coding LOC102004930 disintegrin and metalloproteinase domain-containing protein 1b-like NW_004955482 8479193 8490619 + 102004930 AGCD01057525;AGCD01057526;AGCD01057527;GBDF01005618;XM_005403178 XP_005403235 MODEL 8966735 protein-coding Plekhb1 pleckstrin homology domain containing B1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN regulation of cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955414 17826812 17840988 - 102014039 AGCD01015256;GBDI01000683;XM_005379942;XM_005379943;XM_005379944;XM_005379945;XM_005379946;XM_005379947 XP_005379999;XP_005380000;XP_005380001;XP_005380002;XP_005380003;XP_005380004 MODEL 8733087 protein-coding CUNH17orf67 chromosome unknown C17orf67 homolog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955451 6003689 6020435 + 102014102 AGCD01043195;AGCD01043196;AGCD01043197;GBCE01007112;XM_005394072 XP_005394129 MODEL 8748778 pseudo LOC102007822 60S ribosomal protein L27a pseudogene NW_004955442 13747235 13747833 + 102007822 AGCD01037787 MODEL 8821644 ncrna LOC102025248 uncharacterized LOC102025248 NW_004955485 8508562 8510362 - 102025248 AGCD01058717;GBDF01051854;XR_263929 MODEL 8760438 pseudo LOC102005275 transcription factor BTF3 pseudogene NW_004955497 481788 482491 + 102005275 AGCD01062416 MODEL 8832052 protein-coding Gal3st2 galactose-3-O-sulfotransferase 2 ENCODES a protein that exhibits galactose 3-O-sulfotransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); sulfation (ortholog); ASSOCIATED WITH inflammatory bowel disease (ortholog); nonpapillary renal cell carcinoma (ortholog); thymoma (ortholog); FOUND IN membrane (ortholog) NW_004955542 82972 94041 - 102030569 AGCD01071456;GBDI01327819;XM_005411108;XM_013508080;XM_013508082;XM_013508083;XR_001232163 XP_005411165;XP_013363534;XP_013363536;XP_013363537 MODEL 10393526 ncrna LOC106150073 uncharacterized LOC106150073 NW_004955463 14152785 14159825 + 106150073 AGCD01049902;GBDK01225960;XR_001236655 MODEL 9039057 protein-coding LOC102013566 uncharacterized LOC102013566 NW_004955448 17433598 17833238 + 102013566 AGCD01041719;AGCD01041720;AGCD01041721;AGCD01041722;AGCD01041723;AGCD01041724;AGCD01041725;AGCD01041726;GBDI01112397;XM_005393168;XM_013518622;XM_013518623;XR_001235774;XR_001235775;XR_001235776;XR_001235777;XR_001235778;XR_001235779 XP_005393225;XP_013374076;XP_013374077 MODEL 8707822 protein-coding Asmt acetylserotonin O-methyltransferase ENCODES a protein that exhibits acetylserotonin O-methyltransferase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN melatonin biosynthetic process (ortholog); negative regulation of male gonad development (ortholog); PARTICIPATES IN methionine cycle/metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955499 1131637 1151861 + 102009198 AGCD01063323;AGCD01063324;AGCD01063325;XM_005406516 XP_005406573 MODEL 8710588 protein-coding Sez6l seizure related 6 homolog like INVOLVED IN activation of protein kinase C activity (ortholog); adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955455 816129 992776 + 102013250 AGCD01045565;AGCD01045566;AGCD01045567;GBDF01112713;XM_005396140;XM_013520286 XP_005396197;XP_013375740 MODEL 8997546 pseudo LOC102021462 translocation protein SEC62 pseudogene NW_004955425 16717873 16720163 - 102021462 AGCD01025619;XM_005386094 MODEL 8781482 protein-coding Ddx55 DEAD-box helicase 55 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); large ribosomal subunit rRNA binding (ortholog); INVOLVED IN maturation of LSU-rRNA (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955482 5389195 5401885 - 102015724 AGCD01057326;GBCB01073404;XM_005403028;XM_013503550;XR_263832 XP_005403085;XP_013359004 MODEL 8744537 protein-coding Csrnp1 cysteine and serine rich nuclear protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN face morphogenesis (ortholog); platelet-derived growth factor receptor signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); dilated cardiomyopathy (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955427 24825010 24830030 + 102026027 AGCD01027524;GBDF01154253;GBDK01360113;XM_005386562 XP_005386619 MODEL 9004919 protein-coding LOC102018101 arylacetamide deacetylase-like 4 NW_004955486 1192855 1214886 - 102018101 AGCD01058932;AGCD01058933;AGCD01058934;AGCD01058935;GBCE01042716;XM_013504149 XP_013359603 MODEL 8989104 ncrna LOC102008922 uncharacterized LOC102008922 NW_004955460 11145349 11152507 + 102008922 AGCD01048629;AGCD01048630;GBCQ01032294;XR_001236540 MODEL 8766112 pseudo LOC102003158 zinc transporter ZIP6 pseudogene NW_004955426 25050512 25052806 + 102003158 AGCD01026701 MODEL 8846931 protein-coding Kif24 kinesin family member 24 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); microtubule depolymerization (ortholog); negative regulation of cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) NW_004955472 1774850 1868525 + 102004062 AGCD01053411;AGCD01053412;AGCD01053413;GBDF01126396;XM_005401086;XM_005401087;XM_005401088;XM_005401089;XM_013522982;XM_013522984;XM_013522985;XM_013522986;XR_001237083;XR_001237084;XR_001237085 XP_005401143;XP_005401144;XP_005401145;XP_005401146;XP_013378436;XP_013378438;XP_013378439;XP_013378440 MODEL 9007676 ncrna LOC102005952 uncharacterized LOC102005952 NW_004955429 17092345 17096969 - 102005952 AGCD01028845;GBCQ01165026;XR_001234501;XR_001234502;XR_001234503;XR_261348 MODEL 8708307 protein-coding Barhl2 BarH like homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell fate commitment (ortholog); cell fate determination (ortholog); nervous system development (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Lymphatic Metastasis (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955423 3516973 3522459 + 102005484 AGCD01023515;GBDF01014640;GBDF01014641;XM_013514374 XP_013369828 MODEL 39132361 snrna U6 U6 spliceosomal RNA 8754720 pseudo LOC102003544 arfaptin-1 pseudogene NW_004955416 645573 646813 - 102003544 AGCD01016816 MODEL 8806556 protein-coding LOC102010861 chromosome unknown open reading frame, human C1orf94 INVOLVED IN intracellular protein localization (ortholog); mRNA destabilization (ortholog); single fertilization (ortholog); ASSOCIATED WITH testicular germ cell cancer (ortholog); Testicular Germ Cell Tumor (ortholog); uterine carcinosarcoma (ortholog) NW_004955452 12288967 12325948 + 102010861 AGCD01044350;GBDF01048888;XM_005395119;XM_005395120;XM_005395121 XP_005395176;XP_005395177;XP_005395178 MODEL 8914789 ncrna LOC102010085 uncharacterized LOC102010085 NW_004955518 1844184 1923729 + 102010085 AGCD01067766;AGCD01067767;AGCD01067768;AGCD01067769;GBDJ01260326;XR_264565 MODEL 39132430 rrna 5S_rRNA 5S ribosomal RNA 39134507 misc_rna 7SK 7SK RNA 9059698 protein-coding Snx12 sorting nexin 12 ENCODES a protein that exhibits enzyme binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN negative regulation of early endosome to late endosome transport (ortholog); negative regulation of gene expression (ortholog); negative regulation of protein catabolic process (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN early endosome (ortholog) NW_004955475 10632938 10641452 - 102027521 AGCD01055105;GBCE01118453;XM_005401637 XP_005401694 MODEL 8845975 protein-coding Wdr5 WD repeat domain 5 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4me1 reader activity (ortholog); histone H3Q5ser reader activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuron projection development (ortholog); peptidyl-lysine methylation (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN ATAC complex (ortholog); histone acetyltransferase complex (ortholog); histone methyltransferase complex (ortholog) NW_004955513 3198655 3213754 + 102023728 AGCD01066899;GBDI01187396;XM_005408463;XM_013506677 XP_005408520;XP_013362131 MODEL 8713342 ncrna LOC102012041 uncharacterized LOC102012041 NW_004955402 6962055 6984367 - 102012041 AGCD01000163;GBDF01177670;XR_001235410;XR_001235416;XR_001235420;XR_001235423;XR_259036 MODEL 9021239 protein-coding Dab2ip DAB2 interacting protein ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); death receptor binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell motility involved in cerebral cortex radial glia guided migration (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); atherosclerosis (ortholog); carotid artery occlusion (ortholog); FOUND IN AIP1-IRE1 complex (ortholog); axon (ortholog); cerebellar mossy fiber (ortholog) NW_004955419 6229437 6416619 - 102011992 AGCD01019852;AGCD01019853;AGCD01019854;AGCD01019855;AGCD01019856;AGCD01019857;AGCD01019858;GBDF01128674;XM_005382543;XM_005382544;XM_005382545;XM_005382546;XM_005382549;XM_005382553;XM_005382554;XM_005382555;XM_013513228 XP_005382600;XP_005382601;XP_005382602;XP_005382603;XP_005382606;XP_005382610;XP_005382611;XP_005382612;XP_013368682 MODEL 8741276 protein-coding Fam53c family with sequence similarity 53 member C NW_004955418 2102671 2114993 - 102029514 AGCD01018741;GBDF01084694;XM_005382112;XM_005382113;XM_005382115 XP_005382169;XP_005382170;XP_005382172 MODEL 8708410 ncrna LOC102012439 uncharacterized LOC102012439 NW_004955421 24954942 25002542 - 102012439 AGCD01022225;AGCD01022226;AGCD01022227;GBCQ01157706;XR_001233829;XR_260827 MODEL 8894468 protein-coding Nup210 nucleoporin 210 INVOLVED IN protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955429 12907943 13041819 + 102006695 AGCD01028733;AGCD01028734;AGCD01028735;GBDF01274626;XM_005386982 XP_005387039 MODEL 9050042 pseudo LOC102024539 small acidic protein pseudogene NW_004955464 4195653 4196232 + 102024539 AGCD01049986 MODEL 9006316 protein-coding Hnrnpr heterogeneous nuclear ribonucleoprotein R ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN circadian rhythm (ortholog); mRNA destabilization (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN axon terminus (ortholog); catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog) NW_004955452 3318536 3354725 - 102013243 AGCD01043918;AGCD01043919;AGCD01043920;AGCD01043921;GBDK01089541;XM_005394754;XM_005394759;XM_013519517;XM_013519518 XP_005394811;XP_005394816;XP_013374971;XP_013374972 MODEL 9011407 pseudo LOC102023526 protein kinase C iota type-like NW_004955437 14371160 14373635 + 102023526 AGCD01034669 MODEL 8728771 protein-coding Iqsec1 IQ motif and Sec7 domain ArfGEF 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN dendritic spine development (ortholog); positive regulation of focal adhesion disassembly (ortholog); positive regulation of keratinocyte migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955429 13246585 13373189 + 102007255 AGCD01028739;AGCD01028740;AGCD01028741;AGCD01028742;GBBH01188484;GBDF01250621;XM_005386983;XM_005386985;XM_005386986;XM_005386987;XM_005386988;XM_005386989;XM_013515453;XM_013515455;XM_013515456;XM_013515457 XP_005387040;XP_005387042;XP_005387043;XP_005387044;XP_005387045;XP_005387046;XP_013370907;XP_013370909;XP_013370910;XP_013370911 MODEL 8938054 protein-coding Mlec malectin ENCODES a protein that exhibits enzyme binding (ortholog); protein-folding chaperone binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955455 10969859 10983977 - 102006980 AGCD01045971;AGCD01045972;GBCE01052538;XM_005396493;XM_013520361 XP_005396550;XP_013375815 MODEL 8913450 protein-coding Gpd1 glycerol-3-phosphate dehydrogenase 1 ENCODES a protein that exhibits glycerol-3-phosphate dehydrogenase (quinone) activity (ortholog); glycerol-3-phosphate dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to tumor necrosis factor (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN D-glycericacidemia pathway; electron transport chain pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); clear cell renal cell carcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955547 676661 683906 + 102014610 AGCD01072171;GBCQ01010073;XM_005411873 XP_005411930 MODEL 8897858 protein-coding LOC102004931 olfactory receptor 1L6-like NW_004955419 5194803 5195732 - 102004931 AGCD01019788;XM_005382521 XP_005382578 MODEL 8946047 protein-coding LOC102023166 cytochrome P450 26B1 ENCODES a protein that exhibits oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); retinoic acid 4-hydroxylase activity (ortholog); retinoic acid binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); cell fate determination (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955424 13336189 13355368 + 102023166 AGCD01024631;AGCD01024632;GBBH01028900;GBDK01021875;XM_005385584 XP_005385641 MODEL 8837453 protein-coding Fkbp3 FKBP prolyl isomerase 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955409 16810934 16824380 + 102007864 AGCD01009743;AGCD01009744;GBDF01000475;XM_005376860 XP_005376917 MODEL 10147467 ncrna LOC106150074 uncharacterized LOC106150074 NW_004955464 3852835 3877145 + 106150074 AGCD01049979;XR_001236667 MODEL 8940695 ncrna LOC102007466 uncharacterized LOC102007466 NW_004955532 2166348 2168036 + 102007466 AGCD01070222;GBDF01088883;XR_264727 MODEL 9044425 pseudo LOC102012045 chromobox protein homolog 3 pseudogene NW_004955402 54299108 54299688 - 102012045 AGCD01001394 MODEL 10083626 ncrna LOC106147134 uncharacterized LOC106147134 NW_004955408 290815 298054 - 106147134 AGCD01007915;GBBH01106671;XR_001231891 MODEL 39131551 protein-coding PTGES3L prostaglandin E synthase 3 like 9064388 protein-coding Gls2 glutaminase 2 ENCODES a protein that exhibits glutaminase activity (ortholog); INVOLVED IN reactive oxygen species metabolic process (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 4055088 4065307 - 102010342 AGCD01047364;GBCQ01165367;GBDK01180497;XM_005397316 XP_005397373 MODEL 39134075 misc_rna 7SK 7SK RNA 8748342 protein-coding Hephl1 hephaestin like 1 ENCODES a protein that exhibits ferroxidase activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Lichen Planus Follicularis (ortholog) NW_004955414 461212 551323 - 102019262 AGCD01014728;AGCD01014729;AGCD01014730;AGCD01014731;GBDF01027425;XM_005379683 XP_005379740 MODEL 39131594 rrna 5S_rRNA 5S ribosomal RNA 8878592 ncrna LOC102008924 uncharacterized LOC102008924 NW_004955410 24913016 24966433 + 102008924 AGCD01011136;GBDK01310034;XR_259862 MODEL 8921061 protein-coding Trpv3 transient receptor potential cation channel subfamily V member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN negative regulation of hair cycle (ortholog); positive regulation of calcium ion import (ortholog); response to temperature stimulus (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); autosomal dominant mutilating palmoplantar keratoderma with periorificial keratotic plaques (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); membrane (ortholog) NW_004955467 13246099 13276741 + 102024887 AGCD01051669;AGCD01051670;GBDF01247435;XM_013522250 XP_013377704 MODEL 8906645 protein-coding LOC102022793 EF-hand calcium-binding domain-containing protein 10-like NW_004955410 10144470 10154267 - 102022793 AGCD01010792;AGCD01010793;GBBH01004225;XM_005377248 XP_005377305 MODEL 8893754 protein-coding Barx1 BARX homeobox 1 INVOLVED IN animal organ development (ortholog); anterior/posterior pattern specification (ortholog); cell-cell signaling (ortholog); ASSOCIATED WITH esophagus adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955515 4230713 4234189 + 102009310 AGCD01067318;GBBH01116403;GBCE01029812;XM_005408924 XP_005408981 MODEL 8880918 protein-coding Nacc1 nucleus accumbens associated 1 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); disease of cellular proliferation (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 32135633 32152059 + 102029072 AGCD01016711;AGCD01016712;GBDI01047439;XM_005381054 XP_005381111 MODEL 8851772 protein-coding Bltp1 bridge-like lipid transfer protein family member 1 INVOLVED IN endocytic recycling (ortholog); endosomal transport (ortholog); lipid transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alkuraya-Kucinskas syndrome (ortholog); anemia (ortholog) NW_004955428 18224987 18424425 - 102016180 AGCD01028058;AGCD01028059;AGCD01028060;AGCD01028061;AGCD01028062;AGCD01028063;GBDJ01004871;XM_005386777;XM_013515288;XM_013515289;XM_013515290;XM_013515291;XM_013515292;XM_013515293;XM_013515294;XM_013515295 XP_005386834;XP_013370742;XP_013370743;XP_013370744;XP_013370745;XP_013370746;XP_013370747;XP_013370748;XP_013370749 MODEL 9061546 protein-coding Mxra5 matrix remodeling associated 5 INVOLVED IN response to transforming growth factor beta (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Dwarfism (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955499 1947337 1976847 - 102014152 AGCD01063399;AGCD01063400;GBBH01144247;GBCE01076272;XM_005406527 XP_005406584 MODEL 8900944 protein-coding Plekhb2 pleckstrin homology domain containing B2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955459 594794 661152 + 102016896 AGCD01047942;AGCD01047943;AGCD01047944;AGCD01047945;AGCD01047946;AGCD01047947;GBCQ01001045;GBDJ01009535;XM_013521055 XP_013376509 MODEL 8795136 ncrna LOC102025249 uncharacterized LOC102025249 NW_004955420 13631690 13636547 + 102025249 AGCD01020925;GBDF01082247;XR_260714 MODEL 8946911 protein-coding LOC102007826 zinc finger protein 14-like NW_004955569 1580699 1628988 + 102007826 AGCD01074671;AGCD01074672;AGCD01074673;GBDI01333117;XM_005413504 XP_005413561 MODEL 8885614 pseudo LOC102010862 E3 ubiquitin-protein ligase TRIM23 pseudogene NW_004955405 30595460 30597274 + 102010862 AGCD01005276 MODEL 8932522 protein-coding Gal3st3 galactose-3-O-sulfotransferase 3 ENCODES a protein that exhibits galactose 3-O-sulfotransferase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955422 19259551 19267600 + 102020023 AGCD01022989;AGCD01022990;AGCD01022991;GBCE01077189;XM_013514010;XM_013514011 XP_013369464;XP_013369465 MODEL 8738183 protein-coding Ndufb2 NADH:ubiquinone oxidoreductase subunit B2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955494 2723740 2731054 - 102020259 AGCD01061448;GBDF01049094;XM_005405420;XM_005405421 XP_005405477;XP_005405478 MODEL 8914152 pseudo LOC102013568 anaphase-promoting complex subunit 15 pseudogene NW_004955450 3337411 3337795 + 102013568 AGCD01042429 MODEL 8777303 protein-coding Dach1 dachshund family transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell population proliferation (ortholog); development of primary female sexual characteristics (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955404 34739780 35118037 + 102026936 AGCD01004105;AGCD01004106;AGCD01004107;AGCD01004108;AGCD01004109;AGCD01004110;AGCD01004111;AGCD01004112;AGCD01004113;AGCD01004114;AGCD01004115;AGCD01004116;GBDK01421830;XM_013516960 XP_013372414 MODEL 8985510 protein-coding Wdr53 WD repeat domain 53 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955420 12694208 12714613 - 102013299 AGCD01020884;AGCD01020885;GBDI01358032;XM_005383136;XM_005383137;XM_005383138;XM_013513504 XP_005383193;XP_005383194;XP_005383195;XP_013368958 MODEL 8760564 pseudo LOC102012453 heterogeneous nuclear ribonucleoprotein A3-like NW_004955425 6920489 6940923 - 102012453 AGCD01025375;AGCD01025376 MODEL 8795758 ncrna LOC102018106 uncharacterized LOC102018106 NW_004955422 17085787 17105838 - 102018106 AGCD01022909;AGCD01022910;AGCD01022911;AGCD01022912;GBDJ01421050;XR_001233992 MODEL 8900256 protein-coding Ddx56 DEAD-box helicase 56 ENCODES a protein that exhibits protein sequestering activity (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN defense response to virus (ortholog); host-mediated perturbation of viral RNA genome replication (ortholog); negative regulation of type I interferon production (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955456 7505260 7513225 + 102019029 AGCD01046419;GBDF01081755;XM_005396662 XP_005396719 MODEL 8955615 pseudo LOC102003162 cyclin-dependent kinase 11B pseudogene NW_004955428 12919987 12929693 + 102003162 AGCD01027939;XM_005386732 MODEL 8999943 protein-coding CUNH17orf78 chromosome unknown C17orf78 homolog NW_004955451 617281 645926 - 102025643 AGCD01042942;AGCD01042943;AGCD01042944;AGCD01042945;AGCD01042946;AGCD01042947;GBDF01065478;XM_005393931;XM_005393932;XM_013519174;XM_013519175 XP_005393988;XP_005393989;XP_013374628;XP_013374629 MODEL 39132362 snrna U6 U6 spliceosomal RNA 8925348 ncrna LOC102005277 uncharacterized LOC102005277 NW_004955425 6668270 6682257 - 102005277 AGCD01025372;GBDF01088350;XR_001234268;XR_001234269 MODEL 8990412 protein-coding Gpd1l glycerol-3-phosphate dehydrogenase 1 like ENCODES a protein that exhibits glycerol-3-phosphate dehydrogenase (NAD+) activity (ortholog); sodium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN NAD+ metabolic process (ortholog); positive regulation of protein localization to cell surface (ortholog); positive regulation of sodium ion transport (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 2 (ortholog); cardiomyopathy (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955430 23481957 23536407 + 102025034 AGCD01029824;GBBH01035409;XM_005387525 XP_005387582 MODEL 8936265 pseudo LOC102010087 heparan-alpha-glucosaminide N-acetyltransferase pseudogene NW_004955434 9056708 9057564 - 102010087 AGCD01032287 MODEL 8869370 protein-coding LOC102006320 TERF1-interacting nuclear factor 2 NW_004955409 36120339 36165515 + 102006320 AGCD01010445;AGCD01010446;AGCD01010447;AGCD01010448;AGCD01010449;AGCD01010450;GBDF01003589;XM_005377026;XM_005377027;XM_013510401 XP_005377083;XP_005377084;XP_013365855 MODEL 39134508 misc_rna 7SK 7SK RNA 9061946 protein-coding CUNH17orf99 chromosome unknown C17orf99 homolog INVOLVED IN mature B cell differentiation involved in immune response (ortholog); positive regulation of immunoglobulin production in mucosal tissue (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955506 4397221 4408645 - 102026773 AGCD01065338;GBDI01334322;XM_013505961 XP_013361415 MODEL 8817488 ncrna LOC102021468 uncharacterized LOC102021468 NW_004955429 22067479 22079189 + 102021468 AGCD01029017;GBDK01379872;XR_001234457;XR_001234458 MODEL 9027552 protein-coding Asmtl acetylserotonin O-methyltransferase like ENCODES a protein that exhibits dTTP diphosphatase activity (ortholog); UTP diphosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955499 1033926 1047018 - 102024358 AGCD01063306;AGCD01063307;AGCD01063308;GBCE01031982;GBDI01216735;XM_013505602 XP_013361056 MODEL 8930779 protein-coding Snx13 sorting nexin 13 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); positive regulation of GTPase activity (ortholog); PARTICIPATES IN epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog) NW_004955410 20792659 20925907 - 102024195 AGCD01011052;AGCD01011053;AGCD01011054;GBCE01070030;XM_005377341;XM_005377342 XP_005377398;XP_005377399 MODEL 8799438 pseudo LOC102024540 sodium/potassium-transporting ATPase subunit beta-3 pseudogene NW_004955411 34920604 34921576 + 102024540 AGCD01012417 MODEL 8747218 protein-coding Fkbp4 FKBP prolyl isomerase 4 ENCODES a protein that exhibits ATP binding (ortholog); copper-dependent protein binding (ortholog); GTP binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); copper ion transport (ortholog); embryo implantation (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH androgen insensitivity syndrome (ortholog); FOUND IN axonal growth cone (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955429 18334939 18344530 + 102021997 AGCD01028899;AGCD01028900;GBDF01005695;XM_005387116 XP_005387173 MODEL 8846662 protein-coding Csrnp2 cysteine and serine rich nuclear protein 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleus (ortholog) NW_004955547 1584061 1601556 - 102020056 AGCD01072233;AGCD01072234;GBBH01218735;GBDF01088231;XM_005411889 XP_005411946 MODEL 8804036 protein-coding Sez6l2 seizure related 6 homolog like 2 INVOLVED IN activation of protein kinase C activity (ortholog); adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); neuronal cell body (ortholog) NW_004955493 7059865 7080524 + 102004291 AGCD01061154;GBCE01082309;XM_005405222;XM_005405223;XM_013504789;XM_013504790 XP_005405279;XP_005405280;XP_013360243;XP_013360244 MODEL 9029406 protein-coding Hnrnpu heterogeneous nuclear ribonucleoprotein U ENCODES a protein that exhibits actin binding (ortholog); ATP binding (ortholog); chromatin binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); cardiac muscle cell development (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); ARTERIAL DISSECTION (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cell surface (ortholog); centrosome (ortholog) NW_004955406 8000269 8021554 - 102008494 AGCD01005787;AGCD01005788;GBDK01191704;XM_005374785;XM_005374787 XP_005374842;XP_005374844 MODEL 8955995 protein-coding Nup210l nucleoporin 210 like INVOLVED IN Sertoli cell development (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear membrane (ortholog) NW_004955545 601727 714225 - 102021801 AGCD01071803;AGCD01071804;AGCD01071805;AGCD01071806;AGCD01071807;AGCD01071808;AGCD01071809;AGCD01071810;AGCD01071811;AGCD01071812;AGCD01071813;AGCD01071814;AGCD01071815;GBBH01026507;GBDI01008331;XM_013508241 XP_013363695 MODEL 39134076 misc_rna 7SK 7SK RNA 8916394 protein-coding LOC102023527 5-hydroxyisourate hydrolase-like NW_004955541 3493680 3496468 - 102023527 AGCD01071450;GBCE01141684;XM_005411087 XP_005411144 MODEL 8720376 protein-coding LOC102005953 olfactory receptor 5B2-like NW_004955511 3211089 3212036 - 102005953 AGCD01066450;XM_013506385 XP_013361839 MODEL 8871430 pseudo LOC102018108 60S ribosomal protein L9 pseudogene NW_004955424 10648402 10648984 - 102018108 AGCD01024523 MODEL 39131595 rrna 5S_rRNA 5S ribosomal RNA 9022049 protein-coding Iqsec2 IQ motif and Sec7 domain ArfGEF 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of long-term synaptic depression (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); apraxia (ortholog); FOUND IN glutamatergic synapse (ortholog); photoreceptor ribbon synapse (ortholog); postsynaptic density (ortholog) NW_004955475 285977 369380 - 102013285 AGCD01054685;AGCD01054686;GBCQ01154978;GBDJ01235195;XM_005401487;XM_005401488;XM_013502863 XP_005401544;XP_005401545;XP_013358317 MODEL 8904289 protein-coding Mlf1 myeloid leukemia factor 1 ENCODES a protein that exhibits DNA binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); myeloid progenitor cell differentiation (ortholog); regulation of cell cycle G1/S phase transition (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); cilium (ortholog) NW_004955448 9345303 9383366 + 102025959 AGCD01041470;AGCD01041471;AGCD01041472;GBDF01006239;XM_005393098;XM_005393099;XM_005393101;XM_013518626 XP_005393155;XP_005393156;XP_005393158;XP_013374080 MODEL 8836491 protein-coding LOC102024541 uncharacterized LOC102024541 NW_004955466 10751416 10758838 + 102024541 AGCD01051074;GBDF01119345;XM_005399200;XM_013521874;XR_001236768 XP_005399257;XP_013377328 MODEL 8801476 ncrna LOC102022795 uncharacterized LOC102022795 NW_004955411 13144221 13145817 - 102022795 AGCD01011873;GBDF01279575;XR_259936 MODEL 39132436 rrna 5S_rRNA 5S ribosomal RNA 8943199 protein-coding LOC102004932 histone H2A type 1 NW_004955483 982626 983142 + 102004932 AGCD01057638;XM_013503792 XP_013359246 MODEL 8999801 protein-coding LOC102023167 melanoma-associated antigen 10-like NW_004955498 3160903 3189402 + 102023167 AGCD01062881;AGCD01062882;AGCD01062883;GBDF01220829;XM_005406402;XM_005406403 XP_005406459;XP_005406460 MODEL 10316780 pseudo LOC106149282 nuclear receptor-binding factor 2 pseudogene NW_004955442 19468259 19470552 - 106149282 AGCD01038060 MODEL 8959460 protein-coding Trpv4 transient receptor potential cation channel subfamily V member 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); ATP export (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); anxiety disorder (ortholog); Arachnodactyly (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) NW_004955455 8744865 8781644 + 102018566 AGCD01045908;AGCD01045909;GBCQ01123903;XM_005396446;XM_005396447;XM_013520488 XP_005396503;XP_005396504;XP_013375942 MODEL 9014804 protein-coding Fam72a family with sequence similarity 72 member A INVOLVED IN positive regulation of apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955406 41788278 41801141 - 102017629 AGCD01006692;GBDF01115968;XM_005375387;XM_013523086 XP_005375444;XP_013378540 MODEL 10256008 pseudo LOC106150075 cytoskeleton-associated protein 2 pseudogene NW_004955464 7274411 7276209 - 106150075 AGCD01050057 MODEL 8956478 pseudo LOC102007468 UMP-CMP kinase pseudogene NW_004955540 3132229 3136955 - 102007468 AGCD01071335 MODEL 9021298 ncrna LOC102012046 uncharacterized LOC102012046 NW_004955403 2740603 2756599 + 102012046 AGCD01001738;GBDF01080335;XR_259139 MODEL 8946667 protein-coding Ndufb3 NADH:ubiquinone oxidoreductase subunit B3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955403 477138 483122 - 102024410 AGCD01001693;GBCB01001130;XM_005373215;XM_005373216;XM_005373217;XM_013511795 XP_005373272;XP_005373273;XP_005373274;XP_013367249 MODEL 8955140 protein-coding LOC102007827 UDP-glucuronosyltransferase 2B17-like NW_004955447 4402579 4413284 - 102007827 AGCD01040717;GBCB01083295;XM_005392819;XM_013518535 XP_005392876;XP_013373989 MODEL 8841448 protein-coding Ptgfr prostaglandin F receptor ENCODES a protein that exhibits prostaglandin F receptor activity (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); maternal process involved in female pregnancy (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Airway Obstruction (ortholog); endometriosis (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955423 14768208 14816462 - 102010499 AGCD01023777;AGCD01023778;AGCD01023779;GBCQ01179014;XM_005385183;XM_013514554;XM_013514555 XP_005385240;XP_013370008;XP_013370009 MODEL 8969042 protein-coding Gal3st4 galactose-3-O-sulfotransferase 4 ENCODES a protein that exhibits galactose 3-O-sulfotransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN membrane (ortholog) NW_004955573 637921 644723 + 102025407 AGCD01074995;GBCE01169481;XM_005413733;XM_005413734;XM_013509493;XM_013509495 XP_005413790;XP_005413791;XP_013364947;XP_013364949 MODEL 8818266 protein-coding Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 INVOLVED IN bone mineralization (ortholog); bone remodeling (ortholog); brain development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); apraxia (ortholog); atrial fibrillation (ortholog) NW_004955450 11525245 11719992 + 102024179 AGCD01042665;AGCD01042666;AGCD01042667;AGCD01042668;AGCD01042669;AGCD01042670;AGCD01042671;GBDF01052862;XM_005393785;XM_005393787;XM_013518839;XM_013518840;XM_013518841;XM_013518842 XP_005393842;XP_005393844;XP_013374293;XP_013374294;XP_013374295;XP_013374296 MODEL 8702063 protein-coding Bltp2 bridge-like lipid transfer protein family member 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955481 4509840 4544706 + 102029080 AGCD01056943;GBCE01116508;GBCQ01065420;XM_005402743 XP_005402800 MODEL 8991045 protein-coding Barx2 BARX homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage condensation (ortholog); myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog); transcription regulator complex (ortholog) NW_004955412 30345837 30418186 + 102017210 AGCD01013298;GBCB01038794;XM_005378547 XP_005378604 MODEL 9062876 pseudo LOC102005282 uncharacterized protein C8orf59 homolog NW_004955429 2855876 2858540 - 102005282 AGCD01028442 MODEL 8914210 protein-coding Plekhd1 pleckstrin homology and coiled-coil domain containing D1 ASSOCIATED WITH Breast Neoplasms (ortholog); nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955466 853902 878813 - 102015091 AGCD01050680;GBCB01056747;GBCE01126830;XM_013521969 XP_013377423 MODEL 39134509 misc_rna 7SK 7SK RNA 8815701 ncrna LOC102010866 uncharacterized LOC102010866 NW_004955454 15132762 15145904 + 102010866 AGCD01045485;AGCD01045486;GBDF01016961;XR_001236261;XR_001236262 MODEL 8983946 protein-coding LOC102013569 late cornified envelope protein 1C NW_004955592 613174 614854 - 102013569 AGCD01076320;GBDI01027737;XM_005414621 XP_005414678 MODEL 8840440 protein-coding Kif25 kinesin family member 25 INVOLVED IN establishment of spindle orientation (ortholog); negative regulation of autophagy (ortholog); negative regulation of mitotic centrosome separation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955439 14282985 14311330 - 102026261 AGCD01035973;GBDJ01352842;XM_013517304 XP_013372758 MODEL 8991232 protein-coding Glt1d1 glycosyltransferase 1 domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955482 2208059 2283298 - 102024909 AGCD01057230;AGCD01057231;AGCD01057232;AGCD01057233;AGCD01057234;AGCD01057235;AGCD01057236;GBDF01003661;GBDI01147114;XM_013503709 XP_013359163 MODEL 8768395 ncrna LOC102012454 uncharacterized LOC102012454 NW_004955426 21276896 21279599 - 102012454 AGCD01026583;GBDF01235356;XR_261214 MODEL 8806369 ncrna LOC102003546 uncharacterized LOC102003546 NW_004955417 24120365 24129898 + 102003546 AGCD01018453;GBDJ01104441;XR_260489 MODEL 8775914 protein-coding Dach2 dachshund family transcription factor 2 INVOLVED IN development of primary female sexual characteristics (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog) NW_004955525 667452 1285776 + 102017909 AGCD01069004;AGCD01069005;AGCD01069006;AGCD01069007;AGCD01069008;AGCD01069009;AGCD01069010;AGCD01069011;AGCD01069012;AGCD01069013;AGCD01069014;AGCD01069015;AGCD01069016;AGCD01069017;AGCD01069018;AGCD01069019;AGCD01069020;AGCD01069021;AGCD01069022;AGCD01069023;AGCD01069024;AGCD01069025;AGCD01069026;AGCD01069027;AGCD01069028;AGCD01069029;AGCD01069030;AGCD01069031;XM_005409722 XP_005409779 MODEL 8852292 ncrna LOC102003164 uncharacterized LOC102003164 NW_004955428 25464176 25472249 + 102003164 AGCD01028284;GBDF01123213;XR_261308 MODEL 8889702 protein-coding LOC102008930 cytospin-B NW_004955467 1024739 1302878 + 102008930 AGCD01051247;AGCD01051248;AGCD01051249;AGCD01051250;AGCD01051251;AGCD01051252;AGCD01051253;AGCD01051254;AGCD01051255;AGCD01051256;GBBH01086340;XM_005399302;XM_005399304;XM_013522196;XM_013522197;XM_013522198;XM_013522199;XM_013522200;XM_013522201;XM_013522202;XM_013522203;XM_013522204;XM_013522205 XP_005399359;XP_005399361;XP_013377650;XP_013377651;XP_013377652;XP_013377653;XP_013377654;XP_013377655;XP_013377656;XP_013377657;XP_013377658;XP_013377659 MODEL 8768611 protein-coding Nup214 nucleoporin 214 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); nuclear localization sequence binding (ortholog); structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); protein export from nucleus (ortholog); protein import into nucleus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; mRNA nuclear export pathway; NXF1-NXT1 export pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); brain disease (ortholog); FOUND IN cytoplasmic side of nuclear pore (ortholog); nuclear envelope (ortholog) NW_004955513 955639 1038912 + 102019520 AGCD01066837;AGCD01066838;GBDF01089241;XM_005408354;XM_005408355;XM_005408357;XM_005408358 XP_005408411;XP_005408412;XP_005408414;XP_005408415 MODEL 8802924 protein-coding Hnrnpul1 heterogeneous nuclear ribonucleoprotein U like 1 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955555 219185 254979 + 102011916 AGCD01073024;GBCQ01004649;XM_005412325;XM_005412328;XM_005412329;XM_005412330;XM_005412331;XM_013508689 XP_005412382;XP_005412385;XP_005412386;XP_005412387;XP_005412388;XP_013364143 MODEL 39132363 snrna U6 U6 spliceosomal RNA 39131596 rrna 5S_rRNA 5S ribosomal RNA 8919106 protein-coding Mxra7 matrix remodeling associated 7 INVOLVED IN megakaryocyte differentiation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955506 5589766 5621133 + 102020036 AGCD01065374;GBCE01000135;XM_005407417;XM_013506029 XP_005407474;XP_013361483 MODEL 8927652 protein-coding Gpd2 glycerol-3-phosphate dehydrogenase 2 ENCODES a protein that exhibits glycerol-3-phosphate dehydrogenase (quinone) activity (ortholog); INVOLVED IN camera-type eye development (ortholog); gluconeogenesis (ortholog); glycerol-3-phosphate metabolic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; electron transport chain pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955449 16695855 16804184 - 102017931 AGCD01042224;AGCD01042225;GBCB01006034;XM_005393414;XM_005393415 XP_005393471;XP_005393472 MODEL 8739192 protein-coding LOC102024543 high affinity immunoglobulin gamma Fc receptor I-like NW_004955413 924533 950278 - 102024543 AGCD01013495;AGCD01013496;AGCD01013497;AGCD01013498;GBDK01121288;XM_005378716 XP_005378773 MODEL 8915713 protein-coding LOC102021470 olfactory receptor 8H1-like NW_004955511 5092184 5093131 + 102021470 AGCD01066548;XM_005408085 XP_005408142 MODEL 10266428 pseudo LOC106149283 small nuclear ribonucleoprotein F-like NW_004955442 6969621 6973305 - 106149283 AGCD01037608 MODEL 8726005 protein-coding Asnsd1 asparagine synthetase domain containing 1 INVOLVED IN adipose tissue development (ortholog); muscle organ development (ortholog); skeletal muscle organ development (ortholog); ASSOCIATED WITH myopathy (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog) NW_004955403 9176425 9184310 - 102007394 AGCD01001901;GBDF01123988;GBDI01173372;XM_005373320;XM_013512372 XP_005373377;XP_013367826 MODEL 8942875 protein-coding Wdr54 WD repeat domain 54 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of receptor internalization (ortholog); regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955424 11358694 11362138 - 102003257 AGCD01024564;GBDK01237577;XM_005385517;XM_005385518;XM_005385519 XP_005385574;XP_005385575;XP_005385576 MODEL 8999396 protein-coding Fam76a family with sequence similarity 76 member A ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955452 6932229 6963044 + 102008812 AGCD01044128;AGCD01044129;GBDF01081432;XM_005394926 XP_005394983 MODEL 8923585 protein-coding Snx14 sorting nexin 14 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 20 (ortholog); brachydactyly (ortholog); FOUND IN late endosome (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955411 12967980 13048839 - 102020226 AGCD01011862;AGCD01011863;AGCD01011864;AGCD01011865;AGCD01011866;GBDF01122706;XM_005377702;XM_005377703 XP_005377759;XP_005377760 MODEL 8973101 protein-coding LOC102012047 PRAME family member 9/15-like NW_004955618 227974 229557 - 102012047 AGCD01077320;XM_013510149 XP_013365603 MODEL 39134077 misc_rna 7SK 7SK RNA 8765301 protein-coding LOC102025254 olfactory receptor 2A1/2A42-like NW_004955491 466262 467182 + 102025254 AGCD01060336;XM_005404883 XP_005404940 MODEL 8824533 protein-coding Ddx59 DEAD-box helicase 59 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955406 36861420 36885746 - 102005223 AGCD01006569;AGCD01006570;GBBH01007328;XM_005375143;XM_013522046 XP_005375200;XP_013377500 MODEL 8967113 protein-coding Glt6d1 glycosyltransferase 6 domain containing 1 NW_004955513 4792103 4812302 + 102027441 AGCD01066939;AGCD01066940;GBDF01050584;XM_013506564;XM_013506565 XP_013362018;XP_013362019 MODEL 8786671 ncrna LOC102023528 uncharacterized LOC102023528 NW_004955542 1901156 1906767 + 102023528 AGCD01071507;AGCD01071508;GBDJ01283811;XR_001232146;XR_264858 MODEL 8858821 ncrna LOC102018111 uncharacterized LOC102018111 NW_004955499 5787418 5804841 - 102018111 AGCD01063529;GBDJ01146430;XR_264221 MODEL 8718278 protein-coding Galc galactosylceramidase ENCODES a protein that exhibits galactosylceramidase activity (ortholog); INVOLVED IN galactosylceramide catabolic process (ortholog); myelination (ortholog); sphingolipid catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH amblyopia (ortholog); cervical cancer (ortholog); Creutzfeldt-Jakob disease (ortholog) NW_004955438 10667807 10704386 - 102003695 AGCD01035214;GBBH01007063;XM_005390247;XM_013517230;XM_013517231 XP_005390304;XP_013372684;XP_013372685 MODEL 39132437 rrna 5S_rRNA 5S ribosomal RNA 8771120 protein-coding CUNH18orf32 chromosome unknown C18orf32 homolog INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Glycosylphosphatidylinositol Biosynthesis Defect 25 (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955402 34562221 34566677 - 102012143 AGCD01000864;AGCD01000865;GBBH01061210;XM_005372908;XM_005372909 XP_005372965;XP_005372966 MODEL 8945937 protein-coding Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits SUMO binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of Notch signaling pathway (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 38 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955533 1304675 1489041 + 102022538 AGCD01070356;AGCD01070357;AGCD01070358;AGCD01070359;AGCD01070360;AGCD01070361;GBCE01117742;XM_005410402;XM_013507678;XM_013507679;XM_013507680;XM_013507681;XM_013507682 XP_005410459;XP_013363132;XP_013363133;XP_013363134;XP_013363135;XP_013363136 MODEL 8978239 protein-coding LOC102004934 uncharacterized LOC102004934 NW_004955419 19866435 19869461 + 102004934 AGCD01020220;GBDF01239719;XM_005382936 XP_005382993 MODEL 8725796 protein-coding LOC102023168 melanoma-associated antigen 10-like NW_004955498 4247845 4248615 - 102023168 AGCD01062979;XM_005406483 XP_005406540 MODEL 9059283 protein-coding Bltp3a bridge-like lipid transfer protein family member 3A ENCODES a protein that exhibits histone deacetylase binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN late endosome (ortholog) NW_004955437 2844544 2905073 + 102012244 AGCD01034288;AGCD01034289;AGCD01034290;AGCD01034291;AGCD01034292;GBDF01200537;XM_005390117 XP_005390174 MODEL 8802150 protein-coding Basp1 brain abundant membrane attached signal protein 1 ENCODES a protein that exhibits calmodulin binding (ortholog); protein domain specific binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); podocyte differentiation (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); astigmatism (ortholog); basal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955426 6149756 6193222 + 102013190 AGCD01026147;AGCD01026148;GBCB01080674;XM_013514993 XP_013370447 MODEL 8964150 pseudo LOC102010868 transformer-2 protein homolog alpha pseudogene NW_004955406 19929201 19930073 - 102010868 AGCD01006095 MODEL 8800471 protein-coding LOC102007836 uncharacterized LOC102007836 NW_004955599 462585 469137 + 102007836 AGCD01076650;AGCD01076651;GBDJ01147444;XM_005414765;XR_265153 XP_005414822 MODEL 9033273 protein-coding Nacc2 NACC family member 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955513 4560903 4595081 + 102017370 AGCD01066934;AGCD01066935;AGCD01066936;GBDF01040925;XM_005408531;XM_005408532 XP_005408588;XP_005408589 MODEL 8788169 protein-coding Sf1 splicing factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN Leydig cell differentiation (ortholog); male sex determination (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Enuresis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955422 20391340 20406555 + 102028550 AGCD01023078;AGCD01023079;GBCE01029052;GBDI01001163;XM_013514043;XM_013514044;XM_013514045;XM_013514046 XP_013369497;XP_013369498;XP_013369499;XP_013369500 MODEL 8917357 protein-coding Ptgfrn prostaglandin F2 receptor inhibitor INVOLVED IN lipid droplet organization (ortholog); myoblast fusion involved in skeletal muscle regeneration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955435 20046712 20092051 + 102004001 AGCD01033445;GBDJ01272892;XM_005389111 XP_005389168 MODEL 8847609 protein-coding Dact1 dishevelled binding antagonist of beta catenin 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); delta-catenin binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); dendrite morphogenesis (ortholog); embryonic hindgut morphogenesis (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome (ortholog); Colorectal Neoplasms (ortholog); lung cancer (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955466 12367760 12374141 + 102022483 AGCD01051127;GBCE01045780;GBCQ01030468;XM_013522014 XP_013377468 MODEL 8726520 protein-coding Mlf2 myeloid leukemia factor 2 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955413 4359936 4364284 - 102028519 AGCD01013610;GBDJ01003878;XM_005378824 XP_005378881 MODEL 8994900 ncrna LOC102008932 uncharacterized LOC102008932 NW_004955468 2457664 2458509 + 102008932 AGCD01051818;GBDK01424972;XR_263377 MODEL 8935439 pseudo LOC102022799 cyclin-L1 pseudogene NW_004955466 10427056 10428666 - 102022799 AGCD01051064;XM_005399194 MODEL 39131597 rrna 5S_rRNA 5S ribosomal RNA 8902899 protein-coding Nup35 nucleoporin 35 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear envelope (ortholog); nuclear lamina (ortholog); nuclear membrane (ortholog) NW_004955403 14381591 14415394 - 102015472 AGCD01081636;GBCB01087641;XM_005373341;XM_005373342 XP_005373398;XP_005373399 MODEL 8975973 pseudo LOC102005284 olfactory receptor 5B3-like NW_004955511 3132708 3133618 - 102005284 AGCD01066444 MODEL 39134378 misc_rna 7SK 7SK RNA 8951452 protein-coding Plekhf1 pleckstrin homology and FYVE domain containing 1 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN endosome organization (ortholog); positive regulation of autophagy (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH lung cancer (ortholog); Ovarian Neoplasms (ortholog); sarcoma (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog) NW_004955468 7934024 7943499 - 102012182 AGCD01052017;GBBH01126266;XM_005400111 XP_005400168 MODEL 8860006 ncrna LOC102007469 uncharacterized LOC102007469 NW_004955439 19369735 19412284 - 102007469 AGCD01036083;GBDF01112984;XR_001235205;XR_261997 MODEL 8835147 protein-coding Trpv6 transient receptor potential cation channel subfamily V member 6 ENCODES a protein that exhibits calcium channel activity (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion import (ortholog); calcium ion import across plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); craniosynostosis (ortholog); genetic disease (ortholog); FOUND IN calcium channel complex (ortholog); plasma membrane (ortholog) NW_004955494 820801 835931 - 102004942 AGCD01061385;AGCD01061386;GBCE01039170;XM_005405387 XP_005405444 MODEL 8865016 protein-coding Gper1 G protein-coupled estrogen receptor 1 ENCODES a protein that exhibits chromatin binding (ortholog); estradiol binding (ortholog); G protein-coupled estrogen receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); apoptotic chromosome condensation (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN bisphenol A response pathway; epidermal growth factor/neuregulin signaling pathway; estrogen signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); Dysbiosis (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasm (ortholog) NW_004955460 8790798 8794902 + 102014650 AGCD01048531;GBCQ01162951;XM_005397796 XP_005397853 MODEL 8883413 protein-coding Fkbp5 FKBP prolyl isomerase 5 ENCODES a protein that exhibits heat shock protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); protein folding (ortholog); response to alcohol (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955437 3445515 3548874 - 102029005 AGCD01034318;AGCD01034319;AGCD01034320;AGCD01034321;GBDI01261071;XM_005389562;XM_013516903;XM_013516904 XP_005389619;XP_013372357;XP_013372358 MODEL 8925172 protein-coding Ndufb4 NADH:ubiquinone oxidoreductase subunit B4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955427 20117550 20124114 + 102024708 AGCD01027394;GBDJ01025734;XM_005386467 XP_005386524 MODEL 8765741 ncrna LOC102013571 uncharacterized LOC102013571 NW_004955450 15353511 15354490 + 102013571 AGCD01042789;GBCQ01060641;XR_262557 MODEL 8795575 protein-coding Csrnp3 cysteine and serine rich nuclear protein 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955449 8450292 8635393 - 102011825 AGCD01042013;AGCD01042014;AGCD01042015;AGCD01042016;GBCE01160197;XM_005393293;XM_005393294;XM_013518805 XP_005393350;XP_005393351;XP_013374259 MODEL 8718061 protein-coding LOC102021471 secretoglobin family 1D member-like NW_004955511 6342089 6346015 + 102021471 AGCD01066602;GBCB01129881;XM_013506417 XP_013361871 MODEL 8768936 pseudo LOC102005954 ZZ-type zinc finger-containing protein 3 pseudogene NW_004955430 8912029 8917478 - 102005954 AGCD01029398 MODEL 8911961 pseudo LOC102010093 ubiquitin carboxyl-terminal hydrolase isozyme L5 pseudogene NW_004955439 3610566 3611918 + 102010093 AGCD01035681 MODEL 8994994 pseudo LOC102012048 60S ribosomal protein L12-like NW_004955403 50676234 50697887 - 102012048 AGCD01002969 MODEL 39132365 snrna U6 U6 spliceosomal RNA 39131385 protein-coding MXRA8 matrix remodeling associated 8 8868094 protein-coding Sf3a1 splicing factor 3a subunit 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955455 4579153 4601942 - 102020308 AGCD01045681;GBBH01034806;XM_005396258 XP_005396315 MODEL 8927828 protein-coding Ptgir prostaglandin I2 receptor INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of platelet-derived growth factor receptor signaling pathway (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin I2 signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); atrial fibrillation (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955574 686156 690126 - 102028353 AGCD01075122;GBDK01305224;XM_005413837;XM_005413838;XM_013509573 XP_005413894;XP_005413895;XP_013365027 MODEL 8853779 protein-coding Ddx6 DEAD-box helicase 6 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); negative regulation of neuron differentiation (ortholog); negative regulation of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN adherens junction (ortholog); chromatoid body (ortholog); concave side of sperm head (ortholog) NW_004955412 19854785 19889422 - 102018272 AGCD01012983;GBBH01089966;GBDK01239594;XM_013511147 XP_013366601 MODEL 8866819 protein-coding Iqsec3 IQ motif and Sec7 domain ArfGEF 3 INVOLVED IN activation of GTPase activity (ortholog); postsynapse organization (ortholog); regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); GABA-ergic synapse (ortholog); glycinergic synapse (ortholog) NW_004955454 6978317 7079490 - 102028823 AGCD01045274;AGCD01045275;AGCD01045276;GBDF01289579;XM_013520013 XP_013375467 MODEL 10346803 protein-coding LOC106150076 collagen alpha-2(I) chain-like NW_004955464 8489993 8492743 - 106150076 AGCD01050088;GBDF01197430;XM_013521576 XP_013377030 MODEL 39132445 rrna 5S_rRNA 5S ribosomal RNA 8838639 protein-coding LOC102024546 zinc finger protein 420 NW_004955468 1759716 1837958 + 102024546 AGCD01051780;AGCD01051781;AGCD01051782;GBDF01277928;XM_005399882;XM_005399883;XM_013522305;XM_013522306;XM_013522307;XM_013522308;XM_013522309;XM_013522310;XM_013522311;XM_013522312;XM_013522313;XM_013522314;XM_013522315 XP_005399939;XP_005399940;XP_013377759;XP_013377760;XP_013377761;XP_013377762;XP_013377763;XP_013377764;XP_013377765;XP_013377766;XP_013377767;XP_013377768;XP_013377769 MODEL 8984120 pseudo LOC102023172 transcription elongation factor B polypeptide 1-like NW_004955426 18301576 18302031 - 102023172 AGCD01026519 MODEL 8856160 pseudo LOC102012457 charged multivesicular body protein 5-like NW_004955509 3240394 3241053 + 102012457 AGCD01066019 MODEL 8787342 protein-coding Wdr55 WD repeat domain 55 INVOLVED IN rRNA processing (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955418 33237 37676 - 102025242 AGCD01018664;GBCQ01151900;XM_005382003 XP_005382060 MODEL 8743973 protein-coding LOC102003547 C-C motif chemokine 2 NW_004955481 8954125 8956004 + 102003547 AGCD01057090;GBCE01054732;XM_005402837 XP_005402894 MODEL 8856478 protein-coding Aspa aspartoacylase ENCODES a protein that exhibits aspartoacylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetate metabolic process (ortholog); aspartate metabolic process (ortholog); central nervous system myelination (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Canavan disease (ortholog); Experimental Diabetes Mellitus (ortholog); Tremor (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); myelin sheath (ortholog) NW_004955467 13277014 13332658 - 102023889 AGCD01051670;AGCD01051671;GBCQ01041040;XM_005399729;XM_013522251;XM_013522252;XM_013522253;XM_013522254;XM_013522255 XP_005399786;XP_013377705;XP_013377706;XP_013377707;XP_013377708;XP_013377709 MODEL 39134078 misc_rna 7SK 7SK RNA 8801082 protein-coding LOC102003167 olfactory receptor 5D13-like NW_004955511 533129 545086 + 102003167 AGCD01066333;XM_005408198 XP_005408255 MODEL 8906564 protein-coding Snx15 sorting nexin 15 FOUND IN cytosol (ortholog) NW_004955422 20149570 20158076 - 102020021 AGCD01023068;GBDF01047995;XM_005384526 XP_005384583 MODEL 8927285 ncrna LOC102006322 uncharacterized LOC102006322 NW_004955463 8147644 8156564 - 102006322 AGCD01049756;GBDF01286788;XR_263161 MODEL 9035010 ncrna LOC102025255 uncharacterized LOC102025255 NW_004955422 16465199 16472125 + 102025255 AGCD01022898;GBCE01047979;XR_260891 MODEL 8720941 ncrna LOC102005963 uncharacterized LOC102005963 NW_004955526 3269899 3285554 + 102005963 AGCD01069333;AGCD01069334;GBDI01352716;XR_001231967;XR_001231968;XR_264661 MODEL 9000504 protein-coding Glt8d1 glycosyltransferase 8 domain containing 1 ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955430 2678166 2690555 - 102024832 AGCD01029174;AGCD01029175;AGCD01029176;GBDF01052118;GBDJ01225285;XM_013515590 XP_013371044 MODEL 9024894 protein-coding Hnrnpul2 heterogeneous nuclear ribonucleoprotein U like 2 ASSOCIATED WITH autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955599 492171 502622 + 102010964 AGCD01076653;AGCD01076654;GBBH01033234;XM_005414777 XP_005414834 MODEL 8820365 ncrna LOC102010095 uncharacterized LOC102010095 NW_004955440 18493660 18495295 + 102010095 AGCD01036610;GBDF01126738;XR_001235248 MODEL 8893222 protein-coding Gale UDP-galactose-4-epimerase ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); UDP-glucose 4-epimerase activity (ortholog); INVOLVED IN beta-D-galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); galactose catabolic process (ortholog); galactose metabolic process (ortholog); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); galactose epimerase deficiency (ortholog); galactosemia (ortholog) NW_004955452 3715107 3719288 - 102019562 AGCD01043936;GBDJ01183031;XM_005394776;XM_005394777;XM_005394778;XM_005394780;XM_013519497;XM_013519498 XP_005394833;XP_005394834;XP_005394835;XP_005394837;XP_013374951;XP_013374952 MODEL 10069435 ncrna LOC106147135 uncharacterized LOC106147135 NW_004955521 4460280 4468467 + 106147135 AGCD01068262;GBDI01239940;XR_001231892 MODEL 9054498 protein-coding Herc3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955474 11725323 11871132 - 102023467 AGCD01054633;AGCD01054634;AGCD01054635;AGCD01054636;AGCD01054637;AGCD01054638;AGCD01054639;AGCD01054640;AGCD01054641;GBDJ01190987;XM_005401446;XM_005401448;XM_013502723;XM_013502724 XP_005401503;XP_005401505;XP_013358177;XP_013358178 MODEL 8919855 protein-coding Kif26a kinesin family member 26A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); enteric nervous system development (ortholog); microtubule-based movement (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955538 2801706 2832888 + 102017381 AGCD01071142;GBBH01077414;GBDF01148658;XM_013507896 XP_013363350 MODEL 8938658 protein-coding Nup37 nucleoporin 37 PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear pore outer ring (ortholog) NW_004955405 37215324 37297762 - 102003309 AGCD01005448;AGCD01005449;AGCD01005450;GBDF01060583;XM_005374567;XM_013518766;XM_013518772;XM_013518775;XM_013518782 XP_005374624;XP_013374220;XP_013374226;XP_013374229;XP_013374236 MODEL 8959897 protein-coding Fam76b family with sequence similarity 76 member B INVOLVED IN mRNA stabilization (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of macrophage activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear speck (ortholog) NW_004955412 617089 664452 - 102010142 AGCD01012492;GBBH01082397;GBDF01126355;XM_013511049 XP_013366503 MODEL 8937518 protein-coding LOC102010870 keratin-associated protein 20-2-like NW_004955407 30265855 30266145 + 102010870 AGCD01007631;AGCD01007632;XM_005375652 XP_005375709 MODEL 8789175 protein-coding Batf basic leucine zipper ATF-like transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN defense response to protozoan (ortholog); DNA damage response (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955523 42365 66103 - 102008763 AGCD01068430;AGCD01068431;AGCD01068432;AGCD01068433;GBDK01429928;XM_005409366 XP_005409423 MODEL 8807808 pseudo LOC102024551 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955469 9911436 9913395 + 102024551 AGCD01052520 MODEL 8792324 pseudo LOC102007837 28S ribosomal protein S31, mitochondrial pseudogene NW_004955402 45114932 45115802 - 102007837 AGCD01001130 MODEL 9005667 pseudo LOC102018113 periphilin-1 pseudogene NW_004955503 1977626 1979433 + 102018113 AGCD01064593;XM_005406925 MODEL 8887810 protein-coding Trrap transformation/transcription domain associated protein ENCODES a protein that exhibits chromatin binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); aphasia (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955460 14641891 14761641 + 102003739 AGCD01048757;AGCD01048758;AGCD01048759;AGCD01048760;GBDF01050549;XM_005397925;XM_005397926;XM_005397928;XM_005397930;XM_013521171;XM_013521172;XM_013521173;XM_013521174;XM_013521175;XM_013521176;XM_013521177 XP_005397982;XP_005397983;XP_005397985;XP_005397987;XP_013376625;XP_013376626;XP_013376627;XP_013376628;XP_013376629;XP_013376630;XP_013376631 MODEL 8958310 protein-coding Nadk NAD kinase ENCODES a protein that exhibits NAD+ kinase activity (ortholog); INVOLVED IN NADP+ biosynthetic process (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN niacin metabolic pathway; nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955486 9191923 9217547 + 102027535 AGCD01059165;AGCD01059166;GBDK01073392;XM_005404323 XP_005404380 MODEL 8742218 protein-coding LOC102013574 probable helicase senataxin NW_004955807 9139 18072 - 102013574 AGCD01078384;AGCD01078385;GBDJ01014667;XM_013510197 XP_013365651 MODEL 8974410 pseudo LOC102023530 speckle-type POZ protein A-like NW_004955546 148556 149744 + 102023530 AGCD01071954 MODEL 8992209 protein-coding Mlh1 mutL homolog 1 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN chiasma (ortholog); chromosome (ortholog); condensed chromosome (ortholog) NW_004955421 3890291 3936892 + 102003246 AGCD01021672;AGCD01021673;GBCB01073688;XM_005383684;XM_005383685;XM_005383686;XM_005383688 XP_005383741;XP_005383742;XP_005383743;XP_005383745 MODEL 39131600 rrna 5S_rRNA 5S ribosomal RNA 39132366 snrna U6 U6 spliceosomal RNA 9017659 protein-coding CUNH18orf63 chromosome unknown C18orf63 homolog INVOLVED IN male gonad development (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955402 57753626 57805255 + 102012712 AGCD01001510;AGCD01001511;AGCD01001512;AGCD01001513;GBDF01306192;XM_005373078;XM_013502881 XP_005373135;XP_013358335 MODEL 8797993 protein-coding Dact2 dishevelled binding antagonist of beta catenin 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); delta-catenin binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner medullary collecting duct development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Liver Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955411 4972080 4976011 + 102024538 AGCD01011592;GBCE01037505;GBDF01059772;XM_013510920 XP_013366374 MODEL 8876978 pseudo LOC102005285 poly [ADP-ribose] polymerase 8 pseudogene NW_004955430 8008251 8010551 - 102005285 AGCD01029378 MODEL 39134379 misc_rna 7SK 7SK RNA 8835693 protein-coding Bltp3b bridge-like lipid transfer protein family member 3B ENCODES a protein that exhibits GARP complex binding (ortholog); lipid transfer activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); intermembrane lipid transfer (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog) NW_004955405 35814803 35935553 - 102019020 AGCD01005402;AGCD01005403;AGCD01005404;AGCD01005405;GBDJ01165887;XM_013518586 XP_013374040 MODEL 8757439 protein-coding Iqub IQ motif and ubiquitin domain containing INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); mating (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN 9+2 motile cilium (ortholog); acrosomal vesicle (ortholog); motile cilium (ortholog) NW_004955479 4988718 5059800 - 102012757 AGCD01056340;GBDF01085432;XM_005402325 XP_005402382 MODEL 8978744 protein-coding Sf3a2 splicing factor 3a subunit 2 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955495 5896648 5904287 - 102016929 AGCD01062043;GBDF01008843;XM_005405914;XM_005405915 XP_005405971;XP_005405972 MODEL 8997274 protein-coding LOC102010097 keratin, type II cytoskeletal 6A-like NW_004955547 2793016 2797170 - 102010097 AGCD01072294;XM_013508500 XP_013363954 MODEL 8965077 protein-coding Plekhf2 pleckstrin homology and FYVE domain containing 2 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); transport vesicle (ortholog) NW_004955417 11261712 11282038 + 102003868 AGCD01018128;AGCD01018129;GBDF01183993;XM_005381827 XP_005381884 MODEL 8940206 protein-coding Ndufb5 NADH:ubiquinone oxidoreductase subunit B5 ASSOCIATED WITH acute myocardial infarction (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955420 8778271 8793634 + 102013175 AGCD01020732;AGCD01020733;GBBH01033131;GBDF01009190;XM_013513573 XP_013369027 MODEL 8755918 protein-coding Fkbp6 FKBP prolyl isomerase family member 6 (inactive) ENCODES a protein that exhibits Hsp90 protein binding (ortholog); identical protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); piRNA processing (ortholog); positive regulation of viral genome replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure 77 (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955456 14291445 14318310 - 102029366 AGCD01046638;AGCD01046639;GBDF01051299;XM_005396786 XP_005396843 MODEL 8734054 ncrna LOC102003168 uncharacterized LOC102003168 NW_004955513 4074732 4078682 + 102003168 AGCD01066914;GBDF01146373;XR_264473 MODEL 8922599 protein-coding Csrp1 cysteine and glycine rich protein 1 INVOLVED IN platelet aggregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); endometrial hyperplasia (ortholog); FOUND IN nucleus (ortholog) NW_004955406 37595481 37615384 - 102016343 AGCD01006576;GBCQ01010741;XM_005375184 XP_005375241 MODEL 8950974 protein-coding Fam78a family with sequence similarity 78 member A ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955513 1060145 1073817 - 102021034 AGCD01066839;GBCB01025522;GBDK01362022;XM_005408360 XP_005408417 MODEL 8729461 protein-coding LOC102008935 tripartite motif-containing protein 5-like NW_004955414 21565273 21579442 - 102008935 AGCD01015423;GBDI01215630;XM_013512005;XM_013512006 XP_013367459;XP_013367460 MODEL 9045231 pseudo LOC102012050 protein regulator of cytokinesis 1-like NW_004955451 11417605 11442353 + 102012050 AGCD01043354 MODEL 8957829 pseudo LOC102004938 40S ribosomal protein S14 pseudogene NW_004955421 13418076 13419433 + 102004938 AGCD01021946 MODEL 8813104 protein-coding LOC102022800 lysine-rich coiled-coil protein 1-like NW_004955466 12652234 12652776 - 102022800 AGCD01051133;XM_013521888 XP_013377342 MODEL 8829266 protein-coding Snx16 sorting nexin 16 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endosome to lysosome transport (ortholog); protein targeting to lysosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN early endosome (ortholog); endosome membrane (ortholog); late endosome (ortholog) NW_004955417 159369 209166 - 102025356 AGCD01017788;AGCD01017789;AGCD01017790;AGCD01017791;AGCD01017792;AGCD01017793;GBCB01086124;XM_005381722;XM_005381723 XP_005381779;XP_005381780 MODEL 8987458 protein-coding LOC102005965 cytochrome b-c1 complex subunit 1, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); response to activity (ortholog); response to alkaloid (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955532 685315 691286 - 102005965 AGCD01070144;GBDF01007354;XM_013507657 XP_013363111 MODEL 10215007 protein-coding LOC106150077 collagen alpha-1(II) chain-like NW_004955464 10610938 10615084 - 106150077 AGCD01050126;AGCD01050127;XM_013521577 XP_013377031 MODEL 8721834 protein-coding Galk1 galactokinase 1 ENCODES a protein that exhibits ATP binding (ortholog); galactokinase activity (ortholog); galactose binding (ortholog); INVOLVED IN beta-D-galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); carbohydrate phosphorylation (ortholog); galactitol metabolic process (ortholog); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH cataract (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955506 6489799 6493354 + 102013316 AGCD01065428;GBBH01065204;XM_005407482;XM_013505976 XP_005407539;XP_013361430 MODEL 8896374 protein-coding LOC102007471 very-long-chain 3-oxoacyl-CoA reductase-B-like NW_004955555 2234031 2248419 + 102007471 AGCD01073138;AGCD01073139;AGCD01073140;GBDF01155567;XM_005412503 XP_005412560 MODEL 8789802 protein-coding Ddx60 DExD/H-box helicase 60 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); positive regulation of MDA-5 signaling pathway (ortholog); positive regulation of RIG-I signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955403 37679939 37765074 + 102008809 AGCD01002574;GBCE01165728;XM_005373576;XM_013513440;XM_013513446;XM_013513451;XM_013513454 XP_005373633;XP_013368894;XP_013368900;XP_013368905;XP_013368908 MODEL 8840426 pseudo LOC102023174 band 4.1-like protein 4A NW_004955505 7419575 7423414 + 102023174 AGCD01065207 MODEL 8787848 ncrna LOC102012458 uncharacterized LOC102012458 NW_004955429 17740928 17746251 - 102012458 AGCD01028865;GBDF01045489;XR_001234510 MODEL 8864278 protein-coding LOC102021473 lipocalin NW_004955513 4813800 4818133 - 102021473 AGCD01066940;GBBH01225941;XM_005408547 XP_005408604 MODEL 39134079 misc_rna 7SK 7SK RNA 8907958 protein-coding Wdr59 WD repeat domain 59 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN GATOR2 complex (ortholog); lysosomal membrane (ortholog) NW_004955484 2576505 2668001 + 102024115 AGCD01058120;AGCD01058121;AGCD01058122;GBDF01195114;XM_005403454;XM_005403455 XP_005403511;XP_005403512 MODEL 8708810 protein-coding LOC102024553 olfactory receptor 52E1-like NW_004955414 20797441 20798379 + 102024553 AGCD01015389;XM_005380068 XP_005380125 MODEL 10066967 pseudo LOC106149284 protein FAM136A pseudogene NW_004955442 7665688 7666088 + 106149284 AGCD01037627 MODEL 8826691 protein-coding Aspdh aspartate dehydrogenase domain containing ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955559 652639 655084 + 102017070 AGCD01073606;GBDF01223691;XM_005412778;XM_013509060 XP_005412835;XP_013364514 MODEL 9020268 protein-coding Mxra8 matrix remodeling associated 8 INVOLVED IN establishment of glial blood-brain barrier (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955486 9452707 9456640 + 102023480 AGCD01059186;GBDJ01023572;XM_005404230 XP_005404287 MODEL 9020399 protein-coding LOC102025258 taste receptor type 2 member 143-like NW_004955494 228691 229575 - 102025258 AGCD01061370;XM_005405524 XP_005405581 MODEL 39132448 rrna 5S_rRNA 5S ribosomal RNA 8761807 protein-coding Trub1 TruB pseudouridine synthase family member 1 ENCODES a protein that exhibits pre-miRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of pre-miRNA processing (ortholog); tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955431 19840827 19877930 + 102020477 AGCD01030455;AGCD01030456;GBDF01225347;XM_005387841 XP_005387898 MODEL 8991525 protein-coding Nadk2 NAD kinase 2, mitochondrial ENCODES a protein that exhibits NAD+ kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN NAD+ metabolic process (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH 2,4-Dienoyl-CoA Reductase Deficiency (ortholog); anxiety disorder (ortholog); Breech Presentation (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955426 21002849 21049187 - 102009631 AGCD01026576;AGCD01026577;AGCD01026578;GBBH01117840;XM_013514975;XM_013514976 XP_013370429;XP_013370430 MODEL 39131602 rrna 5S_rRNA 5S ribosomal RNA 10284678 ncrna LOC106147136 uncharacterized LOC106147136 NW_004955522 3748621 3757161 - 106147136 AGCD01068395;GBDK01158580;XR_001231897 MODEL 8817725 protein-coding Herc4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955425 20310264 20418154 - 102030097 AGCD01025728;AGCD01025729;AGCD01025730;GBDF01111610;XM_013514841;XM_013514842;XM_013514843;XM_013514844;XM_013514845;XM_013514846;XM_013514847 XP_013370295;XP_013370296;XP_013370297;XP_013370298;XP_013370299;XP_013370300;XP_013370301 MODEL 8868724 protein-coding Kif26b kinesin family member 26B INVOLVED IN establishment of cell polarity (ortholog); positive regulation of cell-cell adhesion (ortholog); ureteric bud invasion (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 8289774 8738131 + 102009798 AGCD01005801;AGCD01005802;AGCD01005803;AGCD01005804;AGCD01005805;AGCD01005806;AGCD01005807;GBBH01168941;XM_005374788;XM_013520421;XM_013520424 XP_005374845;XP_013375875;XP_013375878 MODEL 8824098 protein-coding Blvra biliverdin reductase A ENCODES a protein that exhibits biliberdin reductase (NADH) activity (ortholog); biliverdin reductase (NADPH) activity (ortholog); biliverdin reductase [NAD(P)H] activity (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); canonical NF-kappaB signal transduction (ortholog); chemotaxis (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH cholestasis (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955460 129077 167345 - 102010875 AGCD01048335;AGCD01048336;AGCD01048337;GBDI01175001;XM_005397710 XP_005397767 MODEL 8951256 protein-coding LOC102007838 vomeronasal type-1 receptor 2-like NW_004955603 405739 406635 + 102007838 AGCD01076843;XM_005414838 XP_005414895 MODEL 8747472 protein-coding LOC102006323 testis-specific Y-encoded-like protein 1 NW_004955464 13241650 13244996 - 102006323 AGCD01050265;XM_013521580 XP_013377034 MODEL 8814627 protein-coding Batf2 basic leucine zipper ATF-like transcription factor 2 INVOLVED IN defense response to protozoan (ortholog); myeloid dendritic cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); melanoma (ortholog); pulmonary tuberculosis (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) NW_004955422 20188965 20195886 + 102021137 AGCD01023068;GBCE01003452;XM_005384530;XM_005384531 XP_005384587;XP_005384588 MODEL 8858084 protein-coding Gpha2 glycoprotein hormone subunit alpha 2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); thyrotropin-releasing hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 20249134 20252329 + 102022826 AGCD01023072;GBCE01092085;XM_005384535;XM_005384536;XM_005384537;XM_005384538;XM_013513969 XP_005384592;XP_005384593;XP_005384594;XP_005384595;XP_013369423 MODEL 8889115 protein-coding LOC102018114 T-cell receptor-associated transmembrane adapter 1 INVOLVED IN negative regulation of receptor recycling (ortholog); negative regulation of transport (ortholog); positive regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) NW_004955427 9665479 9700305 + 102018114 AGCD01027104;GBDI01087718;XM_005386363;XM_013515031;XM_013515032 XP_005386420;XP_013370485;XP_013370486 MODEL 9045257 protein-coding LOC102013576 janus kinase and microtubule-interacting protein 2-like NW_004956233 10107 11664 - 102013576 AGCD01079290;XM_005415183 XP_005415240 MODEL 8791456 pseudo LOC102024554 integrator complex subunit 10 pseudogene NW_004955470 2171427 2172046 - 102024554 AGCD01052673 MODEL 39132367 snrna U6 U6 spliceosomal RNA 8867241 ncrna LOC102012054 uncharacterized LOC102012054 NW_004955405 38958635 38968152 + 102012054 AGCD01005493;GBDK01428567;XR_259444 MODEL 8700751 ncrna LOC102023532 uncharacterized LOC102023532 NW_004955442 14977428 14983811 - 102023532 AGCD01037853;GBDI01024349;XR_262149 MODEL 8976170 protein-coding Mlh3 mutL homolog 3 ENCODES a protein that exhibits centromeric DNA binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA damage response (ortholog); female meiosis I (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN mismatch repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chiasma (ortholog); condensed chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955523 515409 547257 + 102012996 AGCD01068462;AGCD01068463;AGCD01068464;GBCE01163247;XM_005409373;XM_005409374;XM_005409376;XM_013507148 XP_005409430;XP_005409431;XP_005409433;XP_013362602 MODEL 8713097 protein-coding CUNH19orf18 chromosome unknown C19orf18 homolog ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955584 682191 690357 - 102027474 AGCD01075955;GBDF01260757;XM_013509846 XP_013365300 MODEL 8931945 protein-coding Dad1 defender against cell death 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN blastocyst development (ortholog); glycoprotein biosynthetic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN oligosaccharyltransferase complex (ortholog); oligosaccharyltransferase complex A (ortholog); oligosaccharyltransferase complex B (ortholog) NW_004955409 37670266 37688226 + 102008385 AGCD01010533;GBDF01006584;XM_005377131;XM_013510454 XP_005377188;XP_013365908 MODEL 39134380 misc_rna 7SK 7SK RNA 9032987 ncrna LOC102010099 uncharacterized LOC102010099 NW_004955558 861760 862614 + 102010099 AGCD01073396;GBDJ01283073;XR_001232330 MODEL 8773462 pseudo LOC102010871 60S ribosomal protein L39 pseudogene NW_004955455 11174068 11175753 - 102010871 AGCD01045985;XM_005396506;XM_005396507 MODEL 8940088 protein-coding Irag1 inositol 1,4,5-triphosphate receptor associated 1 INVOLVED IN negative regulation of smooth muscle contraction (ortholog); phosphatidylinositol-mediated signaling (ortholog); relaxation of vascular associated smooth muscle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Familial Prostate Cancer (ortholog) NW_004955414 26185226 26297647 - 102008212 AGCD01015640;GBBH01203093;XM_013511906;XM_013511907;XM_013511908;XM_013511909;XM_013511910 XP_013367360;XP_013367361;XP_013367362;XP_013367363;XP_013367364 MODEL 8989851 protein-coding Galk2 galactokinase 2 ENCODES a protein that exhibits galactokinase activity (ortholog); N-acetylgalactosamine kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955409 4751764 4852395 - 102006746 AGCD01009295;AGCD01009296;AGCD01009297;AGCD01009298;AGCD01009299;AGCD01009300;GBDI01216142;XM_005376681;XM_013510295 XP_005376738;XP_013365749 MODEL 8866538 protein-coding Sf3a3 splicing factor 3a subunit 3 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 15691729 15715782 - 102016339 AGCD01044494;AGCD01044495;GBCB01056221;XM_005395224 XP_005395281 MODEL 8970244 protein-coding LOC102012465 transmembrane emp24 domain-containing protein 11 NW_004955514 560181 584300 - 102012465 AGCD01067014;GBDJ01333431;XM_005408689 XP_005408746 MODEL 8932007 protein-coding Deaf1 DEAF1 transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN behavioral fear response (ortholog); embryonic skeletal system development (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); Agenesis of Corpus Callosum (ortholog); allergic disease (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955476 11398187 11422633 + 102013079 AGCD01055456;AGCD01055457;GBDF01050073;GBDJ01088437;XM_013502968;XM_013502969 XP_013358422;XP_013358423 MODEL 8980956 protein-coding Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 INVOLVED IN mitochondrial ATP synthesis coupled electron transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Hypertriglyceridemia (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955472 3054026 3064530 + 102014446 AGCD01053499;AGCD01053500;GBBH01004455;GBCQ01007644;XM_013523044 XP_013378498 MODEL 9051090 protein-coding LOC102007845 cadherin-4 NW_004956069 2464 8492 + 102007845 AGCD01078992;GBDF01207475;XM_005415167 XP_005415224 MODEL 8909523 protein-coding Glt8d2 glycosyltransferase 8 domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog) NW_004955405 38680302 38708383 - 102008689 AGCD01005483;GBBH01076269;XM_005374581;XM_005374583;XM_013518849;XM_013518856;XM_013518857;XM_013518860;XM_013518862;XM_013518864 XP_005374638;XP_005374640;XP_013374303;XP_013374310;XP_013374311;XP_013374314;XP_013374316;XP_013374318 MODEL 8813991 protein-coding Fkbp7 FKBP prolyl isomerase 7 ENCODES a protein that exhibits calcium ion binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955403 18373372 18385172 + 102026699 AGCD01002098;GBDF01188414;XM_005373377;XM_005373378 XP_005373434;XP_005373435 MODEL 8875475 protein-coding Wdr5b WD repeat domain 5B FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955427 21698766 21700390 - 102010390 AGCD01027454;GBCE01034152;XM_005386511 XP_005386568 MODEL 8763719 protein-coding Csrp2 cysteine and glycine rich protein 2 INVOLVED IN myoblast differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955405 16001568 16020642 - 102014859 AGCD01004959;AGCD01004960;GBCE01029256;XM_005374348 XP_005374405 MODEL 10269093 protein-coding LOC106149285 uncharacterized LOC106149285 NW_004955442 9191562 9196920 - 106149285 AGCD01037668;AGCD01037669;GBDF01078097;XM_013517648 XP_013373102 MODEL 8994561 protein-coding LOC102025259 spermatogenesis-associated protein 31E1-like NW_004955422 23945051 23950044 - 102025259 AGCD01023211;GBDF01157943;GBDF01250244;XM_005384977 XP_005385034 MODEL 8705951 protein-coding Nup42 nucleoporin 42 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955410 25487481 25515863 + 102012934 AGCD01011154;AGCD01011155;AGCD01011156;AGCD01011157;GBDF01043576;XM_005377393 XP_005377450 MODEL 8735455 protein-coding Snx17 sorting nexin 17 ENCODES a protein that exhibits low-density lipoprotein particle receptor binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955469 9334562 9340766 + 102029386 AGCD01052498;GBDI01076358;XM_005400489;XM_005400490 XP_005400546;XP_005400547 MODEL 9001346 protein-coding LOC102003548 olfactory receptor 1P1-like NW_004955481 207227 208174 - 102003548 AGCD01056784;XM_005402914 XP_005402971 MODEL 8893141 protein-coding Hoatz HOATZ cilia and flagella associated protein INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog) NW_004955412 13254671 13275832 + 102017209 AGCD01012829;AGCD01012830;GBCE01133720;XM_005378073;XM_005378074;XM_005378075 XP_005378130;XP_005378131;XP_005378132 MODEL 10255402 protein-coding LOC106150078 translation initiation factor IF-2-like NW_004955464 11120250 11135167 + 106150078 AGCD01050136;GBDF01263806;GBDJ01115032;XM_013521578 XP_013377032 MODEL 8838861 protein-coding Ptgis prostaglandin I2 synthase ENCODES a protein that exhibits heme binding (ortholog); hydroperoxy icosatetraenoate dehydratase activity (ortholog); prostaglandin-I synthase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arterial Occlusive Diseases (ortholog); atherosclerosis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955445 8624228 8663385 + 102005315 AGCD01039608;AGCD01039609;GBCE01000913;XM_005392329 XP_005392386 MODEL 8924496 protein-coding LOC102007472 hemoglobin subunit zeta NW_004955442 17015120 17016686 - 102007472 AGCD01037931;XM_005391674 XP_005391731 MODEL 10095735 ncrna LOC106147137 uncharacterized LOC106147137 NW_004955522 3720870 3734233 - 106147137 AGCD01068394;GBCQ01192751;XR_001231898 MODEL 8885094 protein-coding Herc5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 ENCODES a protein that exhibits ISG15 ligase activity (ortholog); ISG15 transferase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); innate immune response (ortholog); ISG15-protein conjugation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955474 11954915 11991849 - 102024558 AGCD01054643;GBDF01085655;XM_013502750 XP_013358204 MODEL 9019224 pseudo LOC102003174 transcription factor E2F6 pseudogene NW_004955437 13053465 13055563 + 102003174 AGCD01034639 MODEL 8979212 protein-coding LOC102010872 zinc finger protein 14-like NW_004955457 13021955 13040077 - 102010872 AGCD01047034;AGCD01047035;GBDF01018457;XM_005397067 XP_005397124 MODEL 8764256 pseudo LOC102008936 glycoprotein endo-alpha-1,2-mannosidase pseudogene NW_004955414 9246135 9247353 + 102008936 AGCD01015014 MODEL 8912936 protein-coding LOC102022807 taste receptor type 2 member 13-like NW_004955413 7975331 7976260 - 102022807 AGCD01013841;XM_013511294 XP_013366748 MODEL 8846315 pseudo LOC102005969 protein FAM204A pseudogene NW_004955438 15499120 15499834 + 102005969 AGCD01035370 MODEL 8990675 ncrna LOC102005286 uncharacterized LOC102005286 NW_004955512 4093717 4097420 - 102005286 AGCD01066728;GBCQ01087532;XR_001231725 MODEL 39132452 rrna 5S_rRNA 5S ribosomal RNA 39131603 rrna 5S_rRNA 5S ribosomal RNA 8955285 protein-coding Nadsyn1 NAD synthetase 1 ENCODES a protein that exhibits NAD+ synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN 'de novo' NAD+ biosynthetic process from L-tryptophan (ortholog); NAD+ biosynthetic process via the salvage pathway (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; de novo nicotinamide adenine dinucleotide biosynthetic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955422 15067711 15113942 - 102016166 AGCD01022875;AGCD01022876;GBDF01159070;XM_005384226;XM_013514259;XM_013514260;XM_013514261;XM_013514263 XP_005384283;XP_013369713;XP_013369714;XP_013369715;XP_013369717 MODEL 8768717 protein-coding Trub2 TruB pseudouridine synthase family member 2 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); tRNA pseudouridine(55) synthase activity (ortholog); INVOLVED IN mitochondrial tRNA pseudouridine synthesis (ortholog); mRNA pseudouridine synthesis (ortholog); positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); ribonucleoprotein granule (ortholog) NW_004955570 826776 837116 - 102024393 AGCD01074769;GBDI01220800;XM_005413537 XP_005413594 MODEL 8868221 ncrna LOC102023175 uncharacterized LOC102023175 NW_004955506 5745218 5748375 - 102023175 AGCD01065386;GBDF01077418;XR_001231603;XR_264360 MODEL 39134381 misc_rna 7SK 7SK RNA 8745406 protein-coding Plekhg1 pleckstrin homology and RhoGEF domain containing G1 ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955439 10636444 10755814 - 102004645 AGCD01035887;GBCE01021171;XM_005390587;XM_013517387;XM_013517388 XP_005390644;XP_013372841;XP_013372842 MODEL 39134080 misc_rna 7SK 7SK RNA 8762369 ncrna LOC102021474 uncharacterized LOC102021474 NW_004955433 10006841 10023375 + 102021474 AGCD01031621;GBDF01126170;XR_001234700;XR_261577;XR_261578 MODEL 9026361 protein-coding CUNH19orf25 chromosome unknown C19orf25 homolog ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); sarcoma (ortholog) NW_004955495 6461082 6464720 + 102030438 AGCD01062082;GBCE01169384;XM_005405964 XP_005406021 MODEL 8868002 protein-coding Dag1 dystroglycan 1 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); dystroglycan binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); axon regeneration (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2P (ortholog); bronchopulmonary dysplasia (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955532 1446553 1465310 + 102014285 AGCD01070188;AGCD01070189;GBBH01117057;GBDK01089592;XM_005410205 XP_005410262 MODEL 39131534 protein-coding IRAG2 inositol 1,4,5-triphosphate receptor associated 2 8856765 protein-coding Kif27 kinesin family member 27 INVOLVED IN cilium assembly (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ventricular system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cilium (ortholog) NW_004955432 3298427 3441116 + 102007686 AGCD01030647;AGCD01030648;AGCD01030649;AGCD01030650;AGCD01030651;AGCD01030652;AGCD01030653;AGCD01030654;AGCD01030655;AGCD01030656;AGCD01030657;AGCD01030658;AGCD01030659;AGCD01030660;AGCD01030661;AGCD01030662;GBBH01213959;XM_005387948;XM_005387957;XM_013515989;XM_013515990;XM_013515991;XM_013515992;XM_013515993;XM_013515994;XM_013515995;XM_013515996;XM_013515997 XP_005388005;XP_005388014;XP_013371443;XP_013371444;XP_013371445;XP_013371446;XP_013371447;XP_013371448;XP_013371449;XP_013371450;XP_013371451 MODEL 8829995 protein-coding Batf3 basic leucine zipper ATF-like transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN dendritic cell differentiation (ortholog); myeloid dendritic cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955815 2852 11035 + 102014633 AGCD01078403;GBBH01214177;GBCE01089580;XM_005415122 XP_005415179 MODEL 8865598 protein-coding Gphb5 glycoprotein hormone subunit beta 5 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); thyrotropin-releasing hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); regulation of thyroid hormone receptor signaling pathway (ortholog); ASSOCIATED WITH lung cancer (ortholog) NW_004955466 6461641 6466777 + 102009481 AGCD01050928;GBDF01015378;XM_005399157;XR_001236814 XP_005399214 MODEL 8945384 protein-coding Aspg asparaginase ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); asparaginase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Anaphylaxis (ortholog); anemia (ortholog) NW_004955538 2765215 2785390 + 102022121 AGCD01071138;AGCD01071139;GBDK01337693;XM_005410824;XM_005410825;XM_005410826;XM_005410827;XR_001232094;XR_264804 XP_005410881;XP_005410882;XP_005410883;XP_005410884 MODEL 8955361 pseudo LOC102018115 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955427 10286735 10287698 + 102018115 AGCD01027142 MODEL 8953892 protein-coding Myadm myeloid associated differentiation marker INVOLVED IN cell-cell junction maintenance (ortholog); establishment of endothelial barrier (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell-cell junction (ortholog); cortical actin cytoskeleton (ortholog); membrane raft (ortholog) NW_004955604 280977 284381 - 102018673 AGCD01076875;GBCB01039086;XM_013510093 XP_013365547 MODEL 8935934 protein-coding Ndufb7 NADH:ubiquinone oxidoreductase subunit B7 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); depressive disorder (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955415 33138888 33142663 - 102018088 AGCD01016752;GBDI01373385;XM_005381108 XP_005381165 MODEL 8775179 ncrna LOC102013584 uncharacterized LOC102013584 NW_004955456 7084779 7090828 + 102013584 AGCD01046384;GBDF01281673;XR_001236335 MODEL 8957408 protein-coding Gltp glycolipid transfer protein ENCODES a protein that exhibits glycolipid binding (ortholog); glycolipid transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); intermembrane lipid transfer (ortholog); regulation of glucosylceramide biosynthetic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog) NW_004955455 8713152 8735320 + 102018259 AGCD01045908;GBDF01222011;XM_005396445 XP_005396502 MODEL 39132368 snrna U6 U6 spliceosomal RNA 9035698 protein-coding Fkbp8 FKBP prolyl isomerase 8 ENCODES a protein that exhibits calmodulin binding (ortholog); disordered domain specific binding (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell fate specification (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH clubfoot (ortholog); lung cancer (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial envelope (ortholog); mitochondrial membrane (ortholog) NW_004955524 3037825 3044296 + 102023733 AGCD01068853;GBDF01003178;XM_013507284;XM_013507285 XP_013362738;XP_013362739 MODEL 8978886 protein-coding LOC102025261 olfactory receptor 7C1-like NW_004955495 785679 795701 - 102025261 AGCD01061653;XM_013505047 XP_013360501 MODEL 8911962 pseudo LOC102010100 putative homeodomain transcription factor 2 pseudogene NW_004955442 14465591 14468091 + 102010100 AGCD01037821 MODEL 9043415 protein-coding LOC102023534 putative P2Y purinoceptor 10 NW_004955557 1986541 2035879 + 102023534 AGCD01073319;AGCD01073320;AGCD01073321;GBCE01162977;XM_005412638;XM_005412639;XM_005412640;XM_013508834;XM_013508835;XM_013508836;XM_013508837 XP_005412695;XP_005412696;XP_005412697;XP_013364288;XP_013364289;XP_013364290;XP_013364291 MODEL 8857503 protein-coding Mlip muscular LMNA interacting protein ENCODES a protein that exhibits lamin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle hypertrophy (ortholog); negative regulation of cardiac muscle hypertrophy in response to stress (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN nuclear envelope (ortholog); nuclear lumen (ortholog); nucleus (ortholog) NW_004955411 1852895 2100617 - 102006434 AGCD01011491;AGCD01011492;AGCD01011493;AGCD01011494;AGCD01011495;AGCD01011496;AGCD01011497;AGCD01011498;GBCB01001997;XM_005377591;XM_005377592;XM_005377593;XM_005377594;XM_005377595;XM_005377596;XM_005377597;XM_005377598;XM_005377599;XM_013510878;XM_013510879;XM_013510880;XM_013510882;XM_013510883 XP_005377648;XP_005377649;XP_005377650;XP_005377651;XP_005377652;XP_005377653;XP_005377654;XP_005377655;XP_005377656;XP_013366332;XP_013366333;XP_013366334;XP_013366336;XP_013366337 MODEL 9000005 pseudo LOC102003550 lysine--tRNA ligase-like NW_004955418 23372260 23375258 + 102003550 AGCD01019301 MODEL 10260273 ncrna LOC106150079 uncharacterized LOC106150079 NW_004955464 5775925 5777879 + 106150079 AGCD01050013;GBDI01194966;XR_001236670 MODEL 8741297 protein-coding Fam78b family with sequence similarity 78 member B NW_004955462 10596799 10693428 + 102029722 AGCD01049369;GBCB01100521;XM_005398240;XM_005398241 XP_005398297;XP_005398298 MODEL 8872034 ncrna LOC102004943 uncharacterized LOC102004943 NW_004955423 3395039 3416041 + 102004943 AGCD01023511;AGCD01023512;GBDF01085995;XR_001234034;XR_001234035;XR_001234036 MODEL 8949894 protein-coding LOC102006328 zinc finger protein 792-like NW_004955468 4283745 4310889 + 102006328 AGCD01051904;AGCD01051905;GBDK01043079;XM_005400008;XM_005400009;XM_005400010;XM_005400011;XM_013522364;XM_013522365 XP_005400065;XP_005400066;XP_005400067;XP_005400068;XP_013377818;XP_013377819 MODEL 10341822 ncrna LOC106147138 uncharacterized LOC106147138 NW_004955522 2709989 2713971 + 106147138 AGCD01068377;GBDF01144333;XR_001231899 MODEL 8947834 protein-coding Sf3b1 splicing factor 3b subunit 1 ENCODES a protein that exhibits chromatin binding (ortholog); pre-mRNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN B-WICH complex (ortholog); catalytic step 2 spliceosome (ortholog); chromatin (ortholog) NW_004955403 3134960 3163395 + 102025074 AGCD01001754;GBCC01000595;XM_005373873 XP_005373930 MODEL 9017322 protein-coding LOC102024556 uncharacterized LOC102024556 NW_004955414 29948314 29960179 + 102024556 AGCD01015720;AGCD01015721;GBDF01111853;XM_013511743 XP_013367197 MODEL 9010363 protein-coding Decr1 2,4-dienoyl-CoA reductase 1 ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); identical protein binding (ortholog); NADPH binding (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH 2,4-Dienoyl-CoA Reductase Deficiency (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic complex (ortholog); mitochondrion (ortholog) NW_004955417 6893231 6931754 + 102010802 AGCD01017994;GBCQ01036028;XM_005381763 XP_005381820 MODEL 8800487 protein-coding Wdr6 WD repeat domain 6 ENCODES a protein that exhibits enzyme regulator activity (ortholog); enzyme-substrate adaptor activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); negative regulation of autophagy (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Dwarfism (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955532 1029857 1039020 + 102008347 AGCD01070161;AGCD01070162;GBCB01099321;XM_005410186;XM_013507579 XP_005410243;XP_013363033 MODEL 8989903 protein-coding LOC102007848 olfactory receptor 4D1-like NW_004955451 4849254 4855277 - 102007848 AGCD01043143;AGCD01043144;GBDF01064574;XM_005394585 XP_005394642 MODEL 8914120 protein-coding LOC102012056 basic proline-rich protein-like NW_004955406 37370333 37389779 + 102012056 AGCD01006576;GBDF01003978;XM_005375168;XR_001236862 XP_005375225 MODEL 10338041 pseudo LOC106149286 FERM domain-containing protein 3-like NW_004955442 14016106 14022711 - 106149286 AGCD01037800;AGCD01037801 MODEL 39132462 rrna 5S_rRNA 5S ribosomal RNA 8781338 protein-coding Nup43 nucleoporin 43 PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear pore outer ring (ortholog) NW_004955439 11534519 11548977 + 102010410 AGCD01035912;AGCD01035913;GBCQ01013851;XM_005390600 XP_005390657 MODEL 8738533 protein-coding Blvrb biliverdin reductase B ENCODES a protein that exhibits biliverdin reductase [NAD(P)H] activity (ortholog); FMN reductase (NADH) activity (ortholog); FMN reductase (NADPH) activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone marrow development (ortholog); cell fate specification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN terminal bouton; cytoplasm (ortholog); cytosol (ortholog) NW_004955578 813834 834675 + 102012040 AGCD01075498;GBCE01001251;XM_005414044 XP_005414101 MODEL 39132369 snrna U6 U6 spliceosomal RNA 8885600 protein-coding Galm galactose mutarotase ENCODES a protein that exhibits aldose 1-epimerase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN beta-D-galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); carbohydrate metabolic process (ortholog); galactose metabolic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955441 6330520 6399522 + 102010736 AGCD01036913;AGCD01036914;AGCD01036915;AGCD01036916;AGCD01036917;GBBH01065127;XM_005390886;XM_013517527;XM_013517528 XP_005390943;XP_013372981;XP_013372982 MODEL 8785102 pseudo LOC102012468 ribose-phosphate pyrophosphokinase 1-like NW_004955519 2455691 2458425 + 102012468 AGCD01067931;AGCD01067932 MODEL 8920367 protein-coding Ptgr1 prostaglandin reductase 1 ENCODES a protein that exhibits 13-lipoxin reductase activity (ortholog); 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); 2-alkenal reductase (NADPH) activity (ortholog); INVOLVED IN leukotriene B4 metabolic process (ortholog); lipoxin A4 metabolic process (ortholog); negative regulation of positive chemotaxis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955419 15708456 15738774 + 102009949 AGCD01020087;AGCD01020088;AGCD01020089;GBDK01361003;XM_005382721;XM_005382722 XP_005382778;XP_005382779 MODEL 9023434 protein-coding Tsbp1 testis expressed basic protein 1 NW_004955437 830178 915199 - 102007696 AGCD01034169;AGCD01034170;AGCD01034171;AGCD01034172;AGCD01034173;AGCD01034174;GBDF01082664;XM_013516714;XM_013516715;XM_013516716;XM_013516717 XP_013372168;XP_013372169;XP_013372170;XP_013372171 MODEL 8774901 ncrna LOC102003180 uncharacterized LOC102003180 NW_004955547 143678 152995 + 102003180 AGCD01072134;GBBH01161629;XR_264896 MODEL 8873942 protein-coding Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955433 14609275 14621774 + 102020699 AGCD01031724;AGCD01031725;GBDF01005639;XM_005388367;XM_005388368;XM_013516271;XM_013516273 XP_005388424;XP_005388425;XP_013371725;XP_013371727 MODEL 8744839 protein-coding Dagla diacylglycerol lipase alpha ENCODES a protein that exhibits hydrolase activity (ortholog); monoacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); diacylglycerol catabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN dendrite membrane (ortholog); dendritic spine membrane (ortholog); early endosome membrane (ortholog) NW_004955511 5952134 5997280 - 102011893 AGCD01066594;GBDK01117691;XM_005408144;XM_013506495 XP_005408201;XP_013361949 MODEL 8742720 protein-coding Csrp3 cysteine and glycine rich protein 3 ENCODES a protein that exhibits actinin binding (ortholog); identical protein binding (ortholog); MRF binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cardiac muscle contraction (ortholog); cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); atrial fibrillation (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955476 155913 176122 - 102003230 AGCD01055192;GBCB01038402;XM_005401712 XP_005401769 MODEL 9016843 protein-coding LOC102022809 olfactory receptor 51F2-like NW_004955414 20291389 20292339 - 102022809 AGCD01015367;XM_005380467 XP_005380524 MODEL 8993749 protein-coding Myadml2 myeloid associated differentiation marker like 2 ASSOCIATED WITH stomach cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955506 1227127 1229182 + 102023824 AGCD01065249;GBDI01323956;XM_005407245 XP_005407302 MODEL 8769837 pseudo LOC102018117 GTPase RhebL1 pseudogene NW_004955428 18782844 18783372 + 102018117 AGCD01028071 MODEL 8935616 protein-coding LOC102005976 sialic acid-binding Ig-like lectin 10 NW_004955558 999418 1002833 + 102005976 AGCD01073409;AGCD01073410;GBDI01356195;GBDJ01063531;XM_013508839 XP_013364293 MODEL 9054330 pseudo LOC102013585 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like NW_004955456 11429523 11430045 + 102013585 AGCD01046551 MODEL 39131604 rrna 5S_rRNA 5S ribosomal RNA 9038755 protein-coding Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 ENCODES a protein that exhibits (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN glyoxylate catabolic process (ortholog); glyoxylate metabolic process (ortholog); oxalate metabolic process (ortholog); ASSOCIATED WITH cholestasis (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955507 3687449 3711939 + 102028995 AGCD01065632;AGCD01065633;GBDK01169834;XM_005407616;XM_005407617;XM_005407618 XP_005407673;XP_005407674;XP_005407675 MODEL 8788145 protein-coding Gltpd2 glycolipid transfer protein domain containing 2 ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955467 10192527 10203765 + 102027505 AGCD01051551;AGCD01051552;AGCD01051553;GBCQ01072144;GBDI01293693;XM_013522215 XP_013377669 MODEL 9053416 ncrna LOC102007849 uncharacterized LOC102007849 NW_004955452 2488589 2501328 + 102007849 AGCD01043896;GBDJ01336024;XR_001236017 MODEL 8797604 protein-coding Kif28 Kinesin-like protein KIF28P INVOLVED IN mitochondrion organization (ortholog); organelle transport along microtubule (ortholog); FOUND IN mitochondrial membrane (ortholog) NW_004955406 9618041 9687626 - 102011836 AGCD01005829;AGCD01005830;AGCD01005831;GBCC01020699;XM_005374794 XP_005374851 MODEL 39132463 rrna 5S_rRNA 5S ribosomal RNA 9047385 pseudo LOC102010103 ubiquitin-conjugating enzyme E2 J1 pseudogene NW_004955444 6424523 6426955 - 102010103 AGCD01038865 MODEL 8721471 pseudo LOC102023176 O(6)-methylguanine-induced apoptosis 2-like NW_004955506 1972894 1985977 - 102023176 AGCD01065284;AGCD01065285;AGCD01065286 MODEL 9028747 protein-coding LOC102007473 N-formyl peptide receptor 2-like NW_004955558 724982 760617 - 102007473 AGCD01073387;AGCD01073388;AGCD01073389;GBDK01358972;XM_005412669;XM_013508868;XM_013508869 XP_005412726;XP_013364322;XP_013364323 MODEL 8787777 gene LOC102010877 T-cell receptor alpha chain V region HPB-MLT-like NW_004955409 38439384 38453331 - 102010877 AGCD01010560;XR_259812 MODEL 8803754 protein-coding LOC102021482 sperm acrosome membrane-associated protein 4-like NW_004955437 249864 253964 - 102021482 AGCD01034115;GBCE01030987;XM_013516852;XM_013516853;XR_001235059;XR_001235060 XP_013372306;XP_013372307 MODEL 8828162 protein-coding Fam81a family with sequence similarity 81 member A ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955450 15282831 15324630 - 102013234 AGCD01042787;GBCQ01064619;XM_005393833;XM_013519023 XP_005393890;XP_013374477 MODEL 8774588 protein-coding CUNH19orf47 chromosome unknown C19orf47 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955578 905540 925570 + 102015359 AGCD01075500;AGCD01075501;AGCD01075502;GBCC01018259;XM_005414057;XM_005414058;XM_005414059;XM_005414061;XM_013509655;XM_013509656;XM_013509657 XP_005414114;XP_005414115;XP_005414116;XP_005414118;XP_013365109;XP_013365110;XP_013365111 MODEL 9000084 protein-coding Irak1 interleukin 1 receptor associated kinase 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); identical protein binding (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to heat (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); asthma (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955580 663651 668622 - 102009440 AGCD01075618;GBBH01032142;GBCB01007238;XM_013509690 XP_013365144 MODEL 8728227 protein-coding LOC102008939 probable E3 ubiquitin-protein ligase HERC6 NW_004955474 12079119 12140769 - 102008939 AGCD01054648;AGCD01054649;AGCD01054650;GBDK01319254;XM_013502713 XP_013358167 MODEL 8906913 ncrna LOC102005289 uncharacterized LOC102005289 NW_004955514 2421476 2423697 + 102005289 AGCD01067079;GBDF01075509;XR_264495 MODEL 8956762 protein-coding Gphn gephyrin ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); molybdopterin adenylyltransferase activity (ortholog); INVOLVED IN establishment of protein localization (ortholog); establishment of synaptic specificity at neuromuscular junction (ortholog); gamma-aminobutyric acid receptor clustering (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); alcohol dependence (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955466 3017474 3526375 - 102018907 AGCD01050780;AGCD01050781;AGCD01050782;AGCD01050783;AGCD01050784;AGCD01050785;AGCD01050786;AGCD01050787;AGCD01050788;AGCD01050789;AGCD01050790;AGCD01050791;AGCD01050792;AGCD01050793;AGCD01050794;AGCD01050795;GBCQ01098398;XM_005399095;XM_005399096;XM_005399098;XM_005399099;XM_005399100;XM_013521942;XM_013521943;XM_013521944;XM_013521945;XM_013521947 XP_005399152;XP_005399153;XP_005399155;XP_005399156;XP_005399157;XP_013377396;XP_013377397;XP_013377398;XP_013377399;XP_013377401 MODEL 8775681 protein-coding Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955485 9607781 9613123 + 102008538 AGCD01058774;GBDF01007822;XM_005403905 XP_005403962 MODEL 8868943 protein-coding Snx18 sorting nexin 18 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colorectal cancer (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955446 13043821 13067933 - 102014096 AGCD01040245;GBDJ01129277;XM_005392757 XP_005392814 MODEL 8867656 protein-coding LOC102024557 olfactory receptor 1019-like NW_004955473 3548903 3549826 + 102024557 AGCD01053935;XM_005401294 XP_005401351 MODEL 8966998 protein-coding Nae1 NEDD8 activating enzyme E1 subunit 1 ENCODES a protein that exhibits NEDD8 activating enzyme activity (ortholog); protein heterodimerization activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN mitotic DNA replication checkpoint signaling (ortholog); neuron apoptotic process (ortholog); protein neddylation (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955433 23333797 23358255 - 102023186 AGCD01031957;AGCD01031958;GBDK01317154;XM_005388472;XM_005388473 XP_005388529;XP_005388530 MODEL 9016356 protein-coding LOC102025265 melanoma-associated antigen 10-like NW_004955498 4274086 4299079 - 102025265 AGCD01062986;AGCD01062987;AGCD01062988;AGCD01062989;AGCD01062990;AGCD01062991;AGCD01062992;GBDF01077002;XM_013505527 XP_013360981 MODEL 8750731 pseudo LOC102023536 speckle-type POZ protein pseudogene NW_004955560 68646 70938 + 102023536 AGCD01073706 MODEL 8707854 protein-coding Fkbp9 FKBP prolyl isomerase 9 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955617 196845 234431 + 102010012 AGCD01077274;AGCD01077275;GBDF01081147;XM_005414998;XM_013510142 XP_005415055;XP_013365596 MODEL 8871366 ncrna LOC102013588 uncharacterized LOC102013588 NW_004955460 8620087 8620963 - 102013588 AGCD01048528;GBBH01206621;XR_001236520 MODEL 8814118 pseudo LOC102003551 CD63 antigen pseudogene NW_004955484 4514735 4515444 - 102003551 AGCD01058216 MODEL 8956392 ncrna LOC102004949 uncharacterized LOC102004949 NW_004955424 14423944 14430745 - 102004949 AGCD01024654;GBDF01279057;XR_261065 MODEL 39132469 rrna 5S_rRNA 5S ribosomal RNA 8857193 protein-coding Ptgr2 prostaglandin reductase 2 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); zinc ion binding (ortholog); INVOLVED IN prostaglandin metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955523 1519767 1549998 - 102024499 AGCD01068523;AGCD01068524;AGCD01068525;GBCQ01000257;XM_005409413 XP_005409470 MODEL 8812794 protein-coding Blzf1 basic leucine zipper nuclear factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); nucleoplasm (ortholog) NW_004955462 7856650 7879659 - 102015699 AGCD01049309;GBDI01293361;XM_005398201;XM_005398202;XM_013521407;XM_013521408;XM_013521409 XP_005398258;XP_005398259;XP_013376861;XP_013376862;XP_013376863 MODEL 8935942 protein-coding Sf3b2 splicing factor 3b subunit 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955422 19242041 19266479 - 102020130 AGCD01022989;AGCD01022990;GBBH01033396;GBDF01043546;XM_005384431 XP_005384488 MODEL 8749713 protein-coding Wdr62 WD repeat domain 62 INVOLVED IN centriole replication (ortholog); cerebral cortex development (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive primary microcephaly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); nucleus (ortholog) NW_004955468 2504181 2545982 - 102011425 AGCD01051824;AGCD01051825;GBDF01003421;XM_013522434;XM_013522435;XM_013522436;XM_013522437 XP_013377888;XP_013377889;XP_013377890;XP_013377891 MODEL 8907317 protein-coding Daglb diacylglycerol lipase beta ENCODES a protein that exhibits lipase activity (ortholog); monoacylglycerol lipase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); icosanoid metabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 13226574 13268060 + 102021529 AGCD01048674;AGCD01048675;AGCD01048676;AGCD01048677;AGCD01048678;GBDK01146299;XM_005397891 XP_005397948 MODEL 8807101 protein-coding Decr2 2,4-dienoyl-CoA reductase 2 ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); trans-2-enoyl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN unsaturated fatty acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955442 16799927 16807199 - 102028024 AGCD01037916;GBDJ01354928;XM_005391647;XM_005391648 XP_005391704;XP_005391705 MODEL 39134382 misc_rna 7SK 7SK RNA 9044251 protein-coding LOC102005977 interleukin-6-like NW_004955443 14546872 14547379 + 102005977 AGCD01038517;XM_005392049 XP_005392106 MODEL 9012823 protein-coding Plekhg2 pleckstrin homology and RhoGEF domain containing G2 INVOLVED IN regulation of actin filament polymerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholelithiasis (ortholog) NW_004955468 138262 149480 - 102022068 AGCD01051683;AGCD01051684;GBBH01065682;XM_013522376 XP_013377830 MODEL 10384272 ncrna LOC106150080 uncharacterized LOC106150080 NW_004955464 5127299 5128697 + 106150080 AGCD01049999;GBCE01138596;XR_001236672 MODEL 39132371 snrna U6 U6 spliceosomal RNA 8768147 protein-coding Mlkl mixed lineage kinase domain like pseudokinase ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein kinase activity (ortholog); INVOLVED IN defense response to virus (ortholog); execution phase of necroptosis (ortholog); necroptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); biotinidase deficiency (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955484 2793092 2819481 + 102029298 AGCD01058134;AGCD01058135;AGCD01058136;GBBH01076605;GBDJ01125607;XM_013503862 XP_013359316 MODEL 8951860 protein-coding LOC102025273 olfactory receptor 4C16-like NW_004955511 350502 351545 + 102025273 AGCD01066328;XM_005407942 XP_005407999 MODEL 9028540 protein-coding Bax BCL2 associated X, apoptosis regulator ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); channel activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic process (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN ceramide signaling pathway; intrinsic apoptotic pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN BAK complex (ortholog); BAX complex (ortholog); Bcl-2 family protein complex (ortholog) NW_004955559 1695960 1700246 - 102027909 AGCD01073660;GBDF01213412;GBDJ01180019;XM_005412921 XP_005412978 MODEL 9042516 pseudo LOC102012474 39S ribosomal protein L18, mitochondrial pseudogene NW_004955540 2266992 2270829 - 102012474 AGCD01071316 MODEL 8995336 protein-coding Asph aspartate beta-hydroxylase ENCODES a protein that exhibits calcium ion binding (ortholog); peptidyl-aspartic acid 3-dioxygenase activity (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); calcium ion homeostasis (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Bile Duct Neoplasms (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955444 17116060 17320966 + 102027913 AGCD01039209;AGCD01039210;AGCD01039211;AGCD01039212;AGCD01039213;GBCB01088404;GBDI01074700;XM_013518174;XM_013518175 XP_013373628;XP_013373629 MODEL 8782188 protein-coding LOC102013593 interferon lambda-2 NW_004955468 254857 256530 - 102013593 AGCD01051686;XM_013522285 XP_013377739 MODEL 8950318 protein-coding LOC102023178 membrane-spanning 4-domains subfamily A member 4A-like NW_004955511 5136245 5165206 - 102023178 AGCD01066549;GBDK01377541;XM_005408090;XM_005408091 XP_005408147;XP_005408148 MODEL 39132476 rrna 5S_rRNA 5S ribosomal RNA 8891776 protein-coding LOC102023537 CD209 antigen-like protein C NW_004955563 1506889 1511879 + 102023537 AGCD01074150;GBDI01304009;XM_005413155;XM_005413156 XP_005413212;XP_005413213 MODEL 8765715 protein-coding CUNH19orf67 chromosome unknown C19orf67 homolog INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955415 32785472 32789328 - 102010998 AGCD01016733;GBDF01089684;XM_005381086 XP_005381143 MODEL 8793634 protein-coding Tsc1 TSC complex subunit 1 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); adaptive immune response (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); Angiofibroma (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell projection (ortholog) NW_004955513 2197037 2244992 - 102030108 AGCD01066870;AGCD01066871;GBCE01045723;XM_005408396;XM_005408397;XM_005408399;XM_013506599;XM_013506600;XM_013506601;XM_013506602;XM_013506603 XP_005408453;XP_005408454;XP_005408456;XP_013362053;XP_013362054;XP_013362055;XP_013362056;XP_013362057 MODEL 10343549 protein-coding LOC106149287 uncharacterized LOC106149287 NW_004955442 14044292 14047498 + 106149287 AGCD01037801;GBDF01112281;XM_013517649 XP_013373103 MODEL 8724016 ncrna LOC102012057 uncharacterized LOC102012057 NW_004955406 39330833 39331560 + 102012057 AGCD01006626;GBDK01343682;XR_259526 MODEL 39134081 misc_rna 7SK 7SK RNA 9036351 protein-coding LOC102022812 spindlin-2B NW_004955475 3534147 3535736 + 102022812 AGCD01054843;GBBH01110817;GBDK01323412;XM_013502884 XP_013358338 MODEL 8725641 pseudo LOC102018118 protein S100-A10 pseudogene NW_004955507 5694303 5694594 + 102018118 AGCD01065684 MODEL 9021720 protein-coding Myb MYB proto-oncogene, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); calcium ion transport (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955439 1523516 1560185 - 102028470 AGCD01035617;AGCD01035618;GBDK01431070;XM_005390488;XM_005390490;XM_005390492;XM_005390493 XP_005390545;XP_005390547;XP_005390549;XP_005390550 MODEL 39131605 rrna 5S_rRNA 5S ribosomal RNA 8988998 protein-coding Gpi glucose-6-phosphate isomerase ENCODES a protein that exhibits glucose-6-phosphate isomerase activity (ortholog); monosaccharide binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); erythrocyte homeostasis (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955468 3980999 4007553 + 102004264 AGCD01051878;AGCD01051879;AGCD01051880;GBDF01000353;XM_005400002 XP_005400059 MODEL 9067386 protein-coding Ndufb9 NADH:ubiquinone oxidoreductase subunit B9 ASSOCIATED WITH nuclear type mitochondrial complex I deficiency 24 (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955540 3198140 3203470 + 102009218 AGCD01071336;GBBH01031574;XM_005410945;XM_005410946 XP_005411002;XP_005411003 MODEL 8956886 protein-coding LOC102024560 transmembrane and coiled-coil domain-containing protein 5B-like NW_004955416 1323376 1331862 + 102024560 AGCD01016833;GBDF01043273;XM_005381168 XP_005381225 MODEL 8834640 protein-coding Glud1 glutamate dehydrogenase 1 ENCODES a protein that exhibits ADP binding (ortholog); enzyme binding (ortholog); GTP binding (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); cerebellum development (ortholog); L-glutamate biosynthetic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); mitochondrial matrix (ortholog) NW_004955510 5987811 6021001 - 102012987 AGCD01066298;GBBH01060664;GBDF01002360;XM_005407910 XP_005407967 MODEL 8798524 protein-coding Homer1 homer scaffold protein 1 ENCODES a protein that exhibits G protein-coupled glutamate receptor binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to L-glutamate (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); cocaine dependence (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); costamere (ortholog) NW_004955425 21644577 21774843 + 102012778 AGCD01025800;AGCD01025801;AGCD01025802;GBBH01099027;XM_005386011 XP_005386068 MODEL 8966087 protein-coding Naf1 nuclear assembly factor 1 ribonucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN positive regulation of telomere maintenance via telomerase (ortholog); positive regulation of telomere maintenance via telomere lengthening (ortholog); ribosome biogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955403 41804273 41840232 + 102014313 AGCD01002734;AGCD01002735;AGCD01002736;GBBH01012120;GBCE01025146;XM_013513571 XP_013369025 MODEL 8726565 protein-coding LOC102003182 protamine-2 NW_004955442 7306731 7307449 + 102003182 AGCD01037623;GBDF01007122;XM_005391168 XP_005391225 MODEL 10089208 ncrna LOC106147139 uncharacterized LOC106147139 NW_004955408 6243631 6264305 + 106147139 AGCD01008169;AGCD01008170;XR_001231901 MODEL 8718506 pseudo LOC102010880 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial pseudogene NW_004955410 29866734 29868389 - 102010880 AGCD01011297 MODEL 9014614 protein-coding LOC102006333 olfactory receptor 52D1 NW_004955414 21395818 21396783 + 102006333 AGCD01015418;XM_005380089 XP_005380146 MODEL 8956145 protein-coding Kif2a kinesin family member 2A ENCODES a protein that exhibits microtubule binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); dendritic transport (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955446 6244547 6279080 - 102025854 AGCD01040090;AGCD01040091;GBDK01281069;XM_005392643;XM_005392645;XM_005392646 XP_005392700;XP_005392702;XP_005392703 MODEL 9024537 protein-coding Dedd death effector domain containing ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN decidualization (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955468 12885547 12897522 - 102027059 AGCD01052190;AGCD01052191;GBDK01187217;XM_005400238;XM_005400240;XM_005400241;XM_013522357 XP_005400295;XP_005400297;XP_005400298;XP_013377811 MODEL 39132372 snrna U6 U6 spliceosomal RNA 8836866 protein-coding Cst11 cystatin 11 INVOLVED IN defense response to Gram-negative bacterium (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) NW_004955415 30445556 30453439 - 102011655 AGCD01016664;GBDF01176636;XM_005381138 XP_005381195 MODEL 10371996 protein-coding Fkbpl FKBP prolyl isomerase like INVOLVED IN regulation of angiogenesis (ortholog); regulation of blood vessel branching (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955437 592098 594244 - 106146274 AGCD01034150;GBDJ01373671;XM_013516901;XM_013516902 XP_013372355;XP_013372356 MODEL 8837990 protein-coding LOC102005291 transcription initiation factor TFIID subunit 4-like NW_004955432 22101100 22117718 + 102005291 AGCD01031246;AGCD01031247;XM_013515921 XP_013371375 MODEL 8877689 pseudo LOC102003185 protein phosphatase inhibitor 2 pseudogene NW_004955562 2132567 2195973 - 102003185 AGCD01074022;AGCD01074023;AGCD01074024;AGCD01074025;AGCD01074026;AGCD01074027;AGCD01074028;XM_005413094 MODEL 8938564 protein-coding Nup50 nucleoporin 50 INVOLVED IN neural tube formation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nuclear pore (ortholog) NW_004955413 29595498 29615167 + 102028076 AGCD01014587;AGCD01014588;GBDF01043702;GBDF01043706;XM_005379475;XM_013511627 XP_005379532;XP_013367081 MODEL 8986430 protein-coding Wdr64 WD repeat domain 64 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955406 10317674 10439077 - 102017950 AGCD01005855;AGCD01005856;AGCD01005857;AGCD01005858;AGCD01005859;AGCD01005860;AGCD01005861;GBDF01159246;GBDF01159247;XM_013520508 XP_013375962 MODEL 8825593 protein-coding Dalrd3 DALR anticodon binding domain containing 3 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN tRNA C3-cytosine methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy 86 (ortholog) NW_004955532 1038861 1042362 - 102007589 AGCD01070162;AGCD01070163;GBDK01142248;XM_005410183 XP_005410240 MODEL 8929175 protein-coding Galns galactosamine (N-acetyl)-6-sulfatase ENCODES a protein that exhibits N-acetylgalactosamine-6-sulfatase activity (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH Ataxia (ortholog); autism spectrum disorder (ortholog); Bone Fractures (ortholog); FOUND IN lysosome (ortholog) NW_004955541 2691103 2711137 - 102005301 AGCD01071422;AGCD01071423;GBCE01030900;GBCE01030901;XM_013507980 XP_013363434 MODEL 8868620 protein-coding LOC102007476 putative methyl-CpG-binding domain protein 3-like 5 NW_004955563 661965 676066 + 102007476 AGCD01074073;AGCD01074074;AGCD01074075;GBDF01166412;XM_005413108 XP_005413165 MODEL 8858827 protein-coding LOC102018121 vomeronasal type-1 receptor 90-like NW_004955429 12382792 12383739 + 102018121 AGCD01028715;XM_005387248 XP_005387305 MODEL 10299668 ncrna LOC106150081 uncharacterized LOC106150081 NW_004955464 10897039 10908003 - 106150081 AGCD01050127;AGCD01050128;AGCD01050129;AGCD01050130;XR_001236674 MODEL 9012435 ncrna LOC102008944 uncharacterized LOC102008944 NW_004955417 25705054 25707401 - 102008944 AGCD01018493;GBCE01099798;XR_260495 MODEL 8986726 ncrna LOC102004950 uncharacterized LOC102004950 NW_004955425 26645515 26663869 - 102004950 AGCD01025951;GBDF01303336;XR_261175;XR_261176 MODEL 8725963 protein-coding Irak1bp1 interleukin 1 receptor associated kinase 1 binding protein 1 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH DEVELOPMENTAL DELAY, INTELLECTUAL DISABILITY, OBESITY, AND DYSMORPHIC FEATURES (ortholog); Sjogren's syndrome (ortholog) NW_004955502 6800532 6811214 + 102005063 AGCD01064421;GBCQ01069000;XM_005406903 XP_005406960 MODEL 8982998 pseudo LOC102012478 60S ribosomal protein L39 pseudogene NW_004955442 7979367 7988554 - 102012478 AGCD01037634;AGCD01037635;XM_005391201;XM_005391202 MODEL 8937444 protein-coding Galnt1 polypeptide N-acetylgalactosaminyltransferase 1 ENCODES a protein that exhibits manganese ion binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); protein O-linked glycosylation via N-acetylgalactosamine (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955402 22311045 22381527 + 102007608 AGCD01000607;GBBH01228986;XM_005415409 XP_005415466 MODEL 8897956 pseudo LOC102007851 cyclin-G1 pseudogene NW_004955404 47890555 47891422 - 102007851 AGCD01004488 MODEL 8799190 protein-coding LOC102013596 olfactory receptor 10A3 NW_004955414 23775674 23776654 - 102013596 AGCD01015522;XM_005380207 XP_005380264 MODEL 8812534 protein-coding Sf3b3 splicing factor 3b subunit 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of protein catabolic process (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955484 3307794 3357600 + 102004819 AGCD01058172;AGCD01058173;AGCD01058174;AGCD01058175;AGCD01058176;GBDF01118268;XM_005403485 XP_005403542 MODEL 39134082 misc_rna 7SK 7SK RNA 8738163 protein-coding Fkrp fukutin related protein ENCODES a protein that exhibits dystroglycan binding (ortholog); identical protein binding (ortholog); laminin binding (ortholog); INVOLVED IN adult walking behavior (ortholog); basement membrane organization (ortholog); bone mineralization (ortholog); ASSOCIATED WITH asthma (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2I (ortholog); FOUND IN cardiac myofibril (ortholog); catalytic complex (ortholog); cytoplasm (ortholog) NW_004955574 779672 789621 + 102017286 AGCD01075128;AGCD01075129;GBBH01007373;GBBH01007374;XM_013509559 XP_013365013 MODEL 8740501 protein-coding Bmal1 basic helix-loop-helix ARNT like 1 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); bHLH transcription factor binding (ortholog); DNA binding (ortholog); INVOLVED IN autophagy (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN chromatoid body (ortholog); CLOCK-BMAL transcription complex (ortholog); cytoplasm (ortholog) NW_004955414 28652663 28748360 + 102018716 AGCD01015682;AGCD01015683;AGCD01015684;AGCD01015685;GBDF01194319;XM_005380316;XM_005380317;XM_005380319;XM_005380321;XM_013511990;XM_013511991 XP_005380373;XP_005380374;XP_005380376;XP_005380378;XP_013367444;XP_013367445 MODEL 39131606 rrna 5S_rRNA 5S ribosomal RNA 9060654 protein-coding Herpud2 HERPUD family member 2 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955460 7461025 7495242 + 102006986 AGCD01048483;GBCE01096963;GBDF01002338;XM_005397772 XP_005397829 MODEL 8788127 protein-coding Plekhg3 pleckstrin homology and RhoGEF domain containing G3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN regulation of cell migration (ortholog); regulation of establishment of cell polarity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955466 5172603 5212518 - 102026957 AGCD01050868;AGCD01050869;GBBH01091213;XM_013521957;XM_013521958;XM_013521959;XM_013521960;XM_013521961;XM_013521963;XM_013521964 XP_013377411;XP_013377412;XP_013377413;XP_013377414;XP_013377415;XP_013377417;XP_013377418 MODEL 8888511 protein-coding Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 ENCODES a protein that exhibits chylomicron binding (ortholog); high-density lipoprotein particle binding (ortholog); lipase binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); intracellular protein transport (ortholog); lipid transport (ortholog); ASSOCIATED WITH colitis (ortholog); familial GPIHBP1 deficiency (ortholog); Hypertriglyceridemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); catalytic complex (ortholog) NW_004955454 1965627 1972479 + 102027041 AGCD01044997;GBDF01041040;XM_005395759;XM_005395760;XM_013520008 XP_005395816;XP_005395817;XP_013375462 MODEL 9009321 protein-coding Fam81b family with sequence similarity 81 member B ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955418 17080146 17126868 - 102029630 AGCD01019143;AGCD01019144;GBDF01002963;XM_013513073;XM_013513074;XM_013513075;XM_013513076 XP_013368527;XP_013368528;XP_013368529;XP_013368530 MODEL 8838001 protein-coding Homer2 homer scaffold protein 2 ENCODES a protein that exhibits actin binding (ortholog); G protein-coupled glutamate receptor binding (ortholog); glutamate receptor binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); calcium-mediated signaling (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness 68 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 13671115 13828413 + 102006126 AGCD01017231;AGCD01017232;AGCD01017233;AGCD01017234;XM_005381473;XM_013512490;XM_013512491;XM_013512492;XM_013512493;XM_013512494 XP_005381530;XP_013367944;XP_013367945;XP_013367946;XP_013367947;XP_013367948 MODEL 8786660 pseudo LOC102023179 olfactory receptor 1030-like NW_004955511 1688075 1689089 - 102023179 AGCD01066377 MODEL 8783522 protein-coding Baz1a bromodomain adjacent to zinc finger domain 1A INVOLVED IN chromatin remodeling (ortholog); DNA-templated DNA replication (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ACF complex (ortholog); CHRAC (ortholog); nuclear chromosome (ortholog) NW_004955409 26136961 26231960 + 102010779 AGCD01010158;AGCD01010159;AGCD01010160;AGCD01010161;AGCD01010162;AGCD01010163;AGCD01010164;GBBH01102027;GBDI01259061;XM_013510376 XP_013365830 MODEL 39132477 rrna 5S_rRNA 5S ribosomal RNA 8871156 protein-coding Asphd1 aspartate beta-hydroxylase domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); spondylocostal dysostosis 5 (ortholog) NW_004955493 7055944 7076802 - 102005944 AGCD01061154;GBDI01165003;XM_005405229;XM_005405230;XM_013504791;XM_013504792;XM_013504793;XM_013504794;XM_013504795;XM_013504796;XM_013504797 XP_005405286;XP_005405287;XP_013360245;XP_013360246;XP_013360247;XP_013360248;XP_013360249;XP_013360250;XP_013360251 MODEL 8793559 ncrna LOC102023538 uncharacterized LOC102023538 NW_004955445 7472747 7495768 - 102023538 AGCD01039542;GBDF01187742;XR_001235576;XR_001235577;XR_001235578;XR_001235579;XR_262308 MODEL 8861401 protein-coding Cst3 cystatin C ENCODES a protein that exhibits amyloid-beta binding (ortholog); cysteine-type endopeptidase inhibitor activity (ortholog); endopeptidase inhibitor activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to oxidative stress (ortholog); defense response (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); age related macular degeneration 11 (ortholog); FOUND IN axon (ortholog); basement membrane (ortholog); cell projection (ortholog) NW_004955415 30507972 30512109 - 102006906 AGCD01016664;GBDF01008320;XM_005380975 XP_005381032 MODEL 9052424 protein-coding Dedd2 death effector domain containing 2 INVOLVED IN apoptotic nuclear changes (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955555 684523 701915 + 102029013 AGCD01073043;AGCD01073044;GBDF01087679;XM_005412386 XP_005412443 MODEL 8741885 protein-coding Snx19 sorting nexin 19 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); dense core granule maturation (ortholog); insulin secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); early endosome membrane (ortholog) NW_004955412 31747519 31791022 - 102024441 AGCD01013343;AGCD01013344;AGCD01013345;GBDK01128502;XM_005378570;XM_005378571;XM_005378572;XM_013511227 XP_005378627;XP_005378628;XP_005378629;XP_013366681 MODEL 8952468 ncrna LOC102022815 uncharacterized LOC102022815 NW_004955416 15179301 15183923 - 102022815 AGCD01017306;AGCD01017307;GBDI01162836;XR_260387;XR_260388 MODEL 8892894 protein-coding Naga alpha-N-acetylgalactosaminidase ENCODES a protein that exhibits alpha-N-acetylgalactosaminidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN carbohydrate catabolic process (ortholog); glycolipid catabolic process (ortholog); ASSOCIATED WITH angiokeratoma (ortholog); arthrogryposis multiplex congenita (ortholog); autistic disorder (ortholog); FOUND IN lysosome (ortholog) NW_004955413 27463931 27472273 - 102004052 AGCD01014508;GBDK01090498;XM_005379395 XP_005379452 MODEL 39134383 misc_rna 7SK 7SK RNA 8887105 protein-coding LOC102012060 cytochrome c oxidase subunit 6A1, mitochondrial ASSOCIATED WITH Charcot-Marie-Tooth disease recessive intermediate D (ortholog); colon adenocarcinoma (ortholog); neuropathy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955455 11201031 11203644 - 102012060 AGCD01045986;GBCQ01009037;XM_005396510 XP_005396567 MODEL 9008640 ncrna LOC102005978 uncharacterized LOC102005978 NW_004955445 8848190 8852122 - 102005978 AGCD01039616;GBBH01088001;XR_001235594 MODEL 8943551 protein-coding LOC102003553 somatomedin-B and thrombospondin type-1 domain-containing protein-like NW_004955420 12198618 12206853 + 102003553 AGCD01020857;GBDF01251527;XM_005383099 XP_005383156 MODEL 8951110 pseudo LOC102024561 xenotropic and polytropic retrovirus receptor 1 pseudogene NW_004955478 9436576 9442072 + 102024561 AGCD01056071 MODEL 9032619 protein-coding LOC102021483 HLA class II histocompatibility antigen, DQ beta 1 chain-like NW_004955437 1393285 1399648 - 102021483 AGCD01034205;GBBH01003753;XM_005389455 XP_005389512 MODEL 9054336 protein-coding Glul glutamate-ammonia ligase ENCODES a protein that exhibits dynein light chain binding (ortholog); glutamine synthetase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to starvation (ortholog); intracellular ammonium homeostasis (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN axon terminus (ortholog); cell body (ortholog); cell projection (ortholog) NW_004955406 21266383 21274546 - 102016128 AGCD01006121;GBCE01003977;XM_005375000 XP_005375057 MODEL 8847174 pseudo LOC102010891 ras-related protein Rab-43 pseudogene NW_004955413 12621970 12622932 - 102010891 AGCD01013994;XM_005379601 MODEL 8891591 protein-coding Mllt1 MLLT1 super elongation complex subunit INVOLVED IN negative regulation of protein kinase activity (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 3289644 3336455 + 102016170 AGCD01061847;AGCD01061848;GBBH01064983;GBCB01043133;XM_013505340 XP_013360794 MODEL 8952633 pseudo LOC102006337 peptidyl-prolyl cis-trans isomerase G pseudogene NW_004955414 2350960 2358590 - 102006337 AGCD01014790;AGCD01014791;AGCD01014792 MODEL 8996682 protein-coding Kif2b kinesin family member 2B INVOLVED IN metaphase chromosome alignment (ortholog); microtubule depolymerization (ortholog); regulation of chromosome segregation (ortholog) NW_004955451 8528405 8530661 - 102020514 AGCD01043272;GBDF01007804;XM_005394091 XP_005394148 MODEL 10277290 ncrna LOC106147140 uncharacterized LOC106147140 NW_004955522 1896065 1898172 + 106147140 AGCD01068364;GBDF01305415;XR_001231900 MODEL 8711922 protein-coding LOC102010104 olfactory receptor 7G2-like NW_004955563 273849 274787 + 102010104 AGCD01074059;XM_005413199 XP_005413256 MODEL 8827915 pseudo LOC102005294 stromal membrane-associated protein 1 pseudogene NW_004955521 63437 64755 + 102005294 AGCD01068128 MODEL 8879551 protein-coding Mybbp1a MYB binding protein 1a ENCODES a protein that exhibits E-box binding (ortholog); sequence-specific DNA binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); circadian regulation of gene expression (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN B-WICH complex (ortholog); cytoplasm (ortholog); NLS-dependent protein nuclear import complex (ortholog) NW_004955467 12390371 12405055 + 102012623 AGCD01051633;GBBH01092495;GBDF01260628;XM_005399687 XP_005399744 MODEL 8753395 protein-coding LOC102007853 uncharacterized LOC102007853 NW_004955406 41658569 41676699 + 102007853 AGCD01006688;GBDK01152399;XM_005375483 XP_005375540 MODEL 10251142 protein-coding Ndufc1 NADH:ubiquinone oxidoreductase subunit C1 ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955428 4343702 4347001 + 106148745 AGCD01027680;GBDF01052293;XM_013515244 XP_013370698 MODEL 39134083 misc_rna 7SK 7SK RNA 39132373 snrna U6 U6 spliceosomal RNA 8760097 protein-coding Bmerb1 bMERB domain containing 1 INVOLVED IN negative regulation of cell motility involved in cerebral cortex radial glia guided migration (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Thoracic Aortic Aneurysm 4 (ortholog); FOUND IN microtubule cytoskeleton (ortholog) NW_004955442 317334 442514 + 102022429 AGCD01037419;AGCD01037420;AGCD01037421;AGCD01037422;AGCD01037423;AGCD01037424;AGCD01037425;GBDF01078842;XM_005391062;XM_005391063 XP_005391119;XP_005391120 MODEL 8814457 protein-coding Dand5 DAN domain BMP antagonist family member 5 ENCODES a protein that exhibits morphogen activity (ortholog); nodal binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN atrial septum development (ortholog); determination of heart left/right asymmetry (ortholog); determination of left/right asymmetry in lateral mesoderm (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); sarcoma (ortholog); visceral heterotaxy 13 (ortholog) NW_004955415 32012637 32015965 + 102014242 AGCD01016708;XM_005381142 XP_005381199 MODEL 8906577 protein-coding Sf3b4 splicing factor 3b subunit 4 ENCODES a protein that exhibits splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); cleft palate (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog); precatalytic spliceosome (ortholog); spliceosomal complex (ortholog) NW_004955413 826190 830502 + 102021955 AGCD01013491;GBDF01082584;XM_005378708 XP_005378765 MODEL 9032861 protein-coding Plekhg4 pleckstrin homology and RhoGEF domain containing G4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955484 9344830 9356182 - 102006352 AGCD01058415;GBDF01154360;XM_005403662;XM_013503891;XM_013503892 XP_005403719;XP_013359345;XP_013359346 MODEL 8985295 protein-coding Wdr7 WD repeat domain 7 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN synaptic vesicle (ortholog) NW_004955402 41071895 41437717 + 102004341 AGCD01001008;AGCD01001009;AGCD01001010;AGCD01001011;AGCD01001012;AGCD01001013;AGCD01001014;AGCD01001015;GBDF01080343;XM_013510978;XM_013510979 XP_013366432;XP_013366433 MODEL 10258653 ncrna LOC106150082 uncharacterized LOC106150082 NW_004955464 12577313 12585933 - 106150082 AGCD01050208;AGCD01050209;GBBH01173946;XR_001236677 MODEL 8832194 protein-coding Gpkow G-patch domain and KOW motifs ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955543 625247 633065 - 102008987 AGCD01071595;GBCE01115774;XM_013508145;XM_013508146 XP_013363599;XP_013363600 MODEL 8933076 ncrna LOC102004954 uncharacterized LOC102004954 NW_004955429 12838202 12852498 + 102004954 AGCD01028732;GBDI01266187;XR_261326 MODEL 8924097 protein-coding Irak2 interleukin 1 receptor associated kinase 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); interleukin-1-mediated signaling pathway (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955561 1585842 1650268 + 102018037 AGCD01073856;AGCD01073857;AGCD01073858;GBDK01284117;XM_005413066 XP_005413123 MODEL 8739573 protein-coding CUNH19orf81 chromosome unknown C19orf81 homolog NW_004955559 566878 575429 - 102015780 AGCD01073594;GBDF01050500;XM_005412774;XM_013508936 XP_005412831;XP_013364390 MODEL 8795267 protein-coding Galnt10 polypeptide N-acetylgalactosaminyltransferase 10 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); protein O-linked glycosylation via N-acetylgalactosamine (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Hereditary Neoplastic Syndromes (ortholog) NW_004955408 8578725 8804562 + 102030280 AGCD01008221;AGCD01008222;AGCD01008223;AGCD01008224;GBBH01208281;XM_005376193 XP_005376250 MODEL 8755061 protein-coding LOC102023180 pancreatic triacylglycerol lipase NW_004955431 21320026 21336388 + 102023180 AGCD01030495;GBBH01130552;XM_005387851;XM_013515758 XP_005387908;XP_013371212 MODEL 8926086 protein-coding Tsc2 TSC complex subunit 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); GTPase activator activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN anoikis (ortholog); cellular response to insulin stimulus (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mitogen activated protein kinase signaling pathway; mTOR signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); Acute Hepatitis (ortholog); acute myeloid leukemia (ortholog); FOUND IN caveola (ortholog); cell projection (ortholog); cytoplasm (ortholog) NW_004955442 15178356 15216978 - 102006398 AGCD01037860;GBDI01113122;XM_005391468;XM_005391470;XM_013517657;XM_013517658;XM_013517660;XM_013517661;XM_013517662 XP_005391525;XP_005391527;XP_013373111;XP_013373112;XP_013373114;XP_013373115;XP_013373116 MODEL 9044466 pseudo LOC102013597 prefoldin subunit 4 pseudogene NW_004955471 2445173 2445577 - 102013597 AGCD01053009 MODEL 8898563 ncrna LOC102023543 uncharacterized LOC102023543 NW_004955449 4046689 4060150 + 102023543 AGCD01041872;AGCD01041873;GBDF01253999;XR_262488 MODEL 39134384 misc_rna 7SK 7SK RNA 8822882 pseudo LOC102022820 olfactory receptor 1N1-like NW_004955419 5426901 5427851 + 102022820 AGCD01019809 MODEL 8780167 ncrna LOC102018125 uncharacterized LOC102018125 NW_004955523 895086 911354 - 102018125 AGCD01068485;GBCE01011399;XR_264635 MODEL 8767504 protein-coding Def6 DEF6 guanine nucleotide exchange factor INVOLVED IN vesicle-mediated transport to the plasma membrane (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955437 3252028 3275512 + 102025506 AGCD01034301;AGCD01034302;AGCD01034303;GBDK01058120;XM_005389551;XM_013516997 XP_005389608;XP_013372451 MODEL 8976625 protein-coding Fktn fukutin ENCODES a protein that exhibits phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2M (ortholog); FOUND IN catalytic complex (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955419 20933662 20994793 - 102028090 AGCD01020258;AGCD01020259;AGCD01020260;AGCD01020261;AGCD01020262;GBCE01181662;XM_005382776;XM_013513225 XP_005382833;XP_013368679 MODEL 39131607 rrna 5S_rRNA 5S ribosomal RNA 8977581 ncrna LOC102008945 uncharacterized LOC102008945 NW_004955418 195005 213629 + 102008945 AGCD01018668;AGCD01018669;GBDF01000281;XR_001233498;XR_001233499 MODEL 9067374 pseudo LOC102007478 ferritin light chain pseudogene NW_004955566 8758 10353 - 102007478 AGCD01074343;XM_005413274 MODEL 9062857 protein-coding Hes1 hes family bHLH transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adenohypophysis development (ortholog); aorta morphogenesis (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955420 14565921 14568447 - 102003971 AGCD01020950;GBDI01068158;XM_005383199 XP_005383256 MODEL 9003095 protein-coding Mybl1 MYB proto-oncogene like 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN male meiosis I (ortholog); positive regulation of piRNA transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955444 12589464 12620602 + 102015994 AGCD01039078;GBBH01218795;GBDF01001095;XM_005392148;XM_005392149 XP_005392205;XP_005392206 MODEL 9026626 protein-coding Fam89a family with sequence similarity 89 member A ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog) NW_004955492 7646755 7665500 + 102024920 AGCD01060802;GBDF01249083;GBDK01038947;XM_005405021 XP_005405078 MODEL 8955652 protein-coding Glyat glycine-N-acyltransferase ENCODES a protein that exhibits glycine N-acyltransferase activity (ortholog); glycine N-benzoyltransferase activity (ortholog); INVOLVED IN benzoyl-CoA metabolic process (ortholog); glycine metabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955511 3670736 3683751 - 102006697 AGCD01066472;GBDI01296560;XM_005408048;XM_005408049 XP_005408105;XP_005408106 MODEL 8704359 protein-coding LOC102012479 uncharacterized LOC102012479 NW_004955559 461354 469388 - 102012479 AGCD01073586;GBDK01094411;XM_013508927;XM_013508928;XM_013508929;XM_013508930;XM_013508931;XM_013508932;XM_013508933;XM_013508934 XP_013364381;XP_013364382;XP_013364383;XP_013364384;XP_013364385;XP_013364386;XP_013364387;XP_013364388 MODEL 8820867 protein-coding Homer3 homer scaffold protein 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of interleukin-2 production (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Keratoconus 5 (ortholog); lung cancer (ortholog); FOUND IN basal part of cell (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955524 2754970 2760198 + 102004513 AGCD01068834;GBDK01051300;XM_005409602;XM_005409603 XP_005409659;XP_005409660 MODEL 8802791 ncrna LOC102006338 uncharacterized LOC102006338 NW_004955472 12747044 12750245 - 102006338 AGCD01053814;GBDJ01152684;XR_263575 MODEL 8743377 ncrna LOC102003187 uncharacterized LOC102003187 NW_004955574 857172 858868 - 102003187 AGCD01075135;GBBH01101002;XR_265062 MODEL 39132485 rrna 5S_rRNA 5S ribosomal RNA 10255991 ncrna LOC106147141 uncharacterized LOC106147141 NW_004955522 3864605 3866339 + 106147141 AGCD01068402;GBDF01008457;XR_001231904 MODEL 8836421 protein-coding Cst6 cystatin E/M INVOLVED IN epidermis development (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 4B (ortholog); Breast Neoplasms (ortholog); ectodermal dysplasia 15 (ortholog); FOUND IN cornified envelope (ortholog) NW_004955422 19326302 19327449 - 102021456 AGCD01023000;GBCE01001766;GBCQ01008481;XM_005384435 XP_005384492 MODEL 8714406 protein-coding LOC102025274 olfactory receptor 9I1-like NW_004955511 2929294 2930226 + 102025274 AGCD01066436;XM_005408021 XP_005408078 MODEL 8866413 protein-coding Asphd2 aspartate beta-hydroxylase domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog) NW_004955455 1030962 1039129 + 102013797 AGCD01045568;GBDF01220555;GBDF01220556;XM_013520382 XP_013375836 MODEL 9042549 protein-coding Nup54 nucleoporin 54 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); structural constituent of nuclear pore (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); protein targeting (ortholog); regulation of protein import into nucleus (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nuclear pore (ortholog) NW_004955433 853921 879861 - 102012888 AGCD01031339;GBDJ01272236;XM_005388180 XP_005388237 MODEL 8802036 protein-coding Snx2 sorting nexin 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN lamellipodium morphogenesis (ortholog); retrograde transport, endosome to Golgi (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955521 870469 934112 + 102009868 AGCD01068154;AGCD01068155;AGCD01068156;AGCD01068157;AGCD01068158;AGCD01068159;AGCD01068160;AGCD01068161;GBCE01029530;XM_005409303 XP_005409360 MODEL 8974596 pseudo LOC102005982 DCN1-like protein 1 pseudogene NW_004955582 422159 422898 - 102005982 AGCD01075756 MODEL 8824114 protein-coding LOC102012063 NEDD4-binding protein 2-like 2 NW_004955407 28220425 28222169 + 102012063 AGCD01007577;XM_013505975 XP_013361429 MODEL 8931707 ncrna LOC102021485 uncharacterized LOC102021485 NW_004955437 18547542 18548483 - 102021485 AGCD01034802;GBDJ01307924;XR_261893 MODEL 8769497 ncrna LOC102003554 uncharacterized LOC102003554 NW_004955420 23737531 23739070 - 102003554 AGCD01021255;GBBH01155304;XR_001233760;XR_260743 MODEL 39132374 snrna U6 U6 spliceosomal RNA 8868888 protein-coding Baz1b bromodomain adjacent to zinc finger domain 1B ENCODES a protein that exhibits histone binding (ortholog); histone H2AXY142 kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN chromatin organization (ortholog); chromatin remodeling (ortholog); DNA damage response (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN B-WICH complex (ortholog); condensed chromosome (ortholog); nuclear replication fork (ortholog) NW_004955456 14185091 14242391 + 102013587 AGCD01046636;AGCD01046637;GBDF01045151;GBDJ01091843;XM_013520577 XP_013376031 MODEL 8783038 protein-coding Def8 differentially expressed in FDCP 8 homolog INVOLVED IN lysosome localization (ortholog); positive regulation of bone resorption (ortholog); positive regulation of ruffle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955541 3412534 3424010 + 102019640 AGCD01071445;AGCD01071446;GBCB01074199;GBDK01015063;XM_005411072;XM_005411073 XP_005411129;XP_005411130 MODEL 9049636 protein-coding Kif2c kinesin family member 2C ENCODES a protein that exhibits microtubule plus-end binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment or maintenance of microtubule cytoskeleton polarity (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); glutamatergic synapse (ortholog); kinetochore (ortholog) NW_004955464 13453637 13475447 - 102011966 AGCD01050281;AGCD01050282;AGCD01050283;GBDF01008525;XM_005398743;XM_005398744;XM_005398746;XM_013521631;XM_013521632 XP_005398800;XP_005398801;XP_005398803;XP_013377085;XP_013377086 MODEL 9002998 protein-coding LOC102010105 leukocyte immunoglobulin-like receptor subfamily B member 4 NW_004955567 1451186 1471664 - 102010105 AGCD01074476;GBCE01047626;XM_013509228 XP_013364682 MODEL 8786214 protein-coding Plekhg5 pleckstrin homology and RhoGEF domain containing G5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endothelial cell chemotaxis (ortholog); endothelial cell migration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); autosomal recessive distal hereditary motor neuronopathy 4 (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955486 6099654 6121805 + 102010165 AGCD01059108;GBBH01085966;XM_005404088;XM_013504284;XM_013504285;XM_013504286;XM_013504288 XP_005404145;XP_013359738;XP_013359739;XP_013359740;XP_013359742 MODEL 10165605 protein-coding LOC106149288 octapeptide-repeat protein T2-like NW_004955442 14334342 14336703 + 106149288 AGCD01037810;AGCD01037811;GBBH01187411;XM_013517651 XP_013373105 MODEL 8891108 protein-coding Nagk N-acetylglucosamine kinase ENCODES a protein that exhibits muramyl dipeptide kinase activity (ortholog); N-acetylglucosamine kinase activity (ortholog); N-acylmannosamine kinase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); N-acetylglucosamine catabolic process (ortholog); N-acetylglucosamine metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955424 14205689 14215201 - 102028875 AGCD01024647;GBDJ01181339;XM_005385603 XP_005385660 MODEL 8818579 protein-coding Irak3 interleukin 1 receptor associated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 12839995 12880285 + 102010132 AGCD01047791;GBDJ01062726;XM_013520896 XP_013376350 MODEL 8888084 protein-coding Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 ENCODES a protein that exhibits Notch binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955491 6218589 6239416 + 102011875 AGCD01060520;AGCD01060521;AGCD01060522;GBCB01020757;XM_005404844 XP_005404901 MODEL 8713018 ncrna LOC102024562 uncharacterized LOC102024562 NW_004955416 31688788 31730228 + 102024562 AGCD01017769;GBDF01307972;XR_001233366;XR_001233367;XR_001233368;XR_260450 MODEL 8714546 protein-coding Cst7 cystatin F ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); peptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); negative regulation of microglial cell activation (ortholog); positive regulation of myelination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog) NW_004955415 31082978 31086379 + 102008720 AGCD01016669;GBBH01155183;XM_005380981 XP_005381038 MODEL 9062877 protein-coding Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); negative regulation of cellular process (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Nuclear Type Mitochondrial Complex I Deficiency 36 (ortholog); stroke (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955414 13867880 13878040 + 102006118 AGCD01015123;GBDF01236739;XM_005379822 XP_005379879 MODEL 39134084 misc_rna 7SK 7SK RNA 39131608 rrna 5S_rRNA 5S ribosomal RNA 8718955 protein-coding Dao D-amino acid oxidase ENCODES a protein that exhibits D-amino-acid dehydrogenase activity (ortholog); D-amino-acid oxidase activity (ortholog); FAD binding (ortholog); INVOLVED IN amino acid catabolic process (ortholog); antibacterial humoral response (ortholog); D-alanine catabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955455 10095597 10127244 + 102028267 AGCD01045938;AGCD01045939;AGCD01045940;AGCD01045941;AGCD01045942;AGCD01045943;AGCD01045944;AGCD01045945;GBDF01299326;XM_005396478 XP_005396535 MODEL 8729807 protein-coding LOC102021486 uncharacterized LOC102021486 NW_004955538 2766334 2771809 - 102021486 AGCD01071138;AGCD01071139;GBBH01020607;XM_005410822;XM_005410823;XM_013507898 XP_005410879;XP_005410880;XP_013363352 MODEL 8777407 protein-coding Sf3b5 splicing factor 3b subunit 5 ENCODES a protein that exhibits RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955436 16380412 16381373 + 102004851 AGCD01033915;GBBH01031902;XM_005389240 XP_005389297 MODEL 9046039 protein-coding Bmf Bcl2 modifying factor INVOLVED IN anoikis (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of autophagy (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal vesicle (ortholog); actin cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955416 7048654 7068917 - 102014243 AGCD01016961;GBBH01186132;XM_005381214;XM_005381215 XP_005381271;XP_005381272 MODEL 9015286 protein-coding Wdr70 WD repeat domain 70 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN spliceosomal complex (ortholog); U2-type catalytic step 1 spliceosome (ortholog) NW_004955426 22062872 22344596 + 102016728 AGCD01026604;AGCD01026605;AGCD01026606;AGCD01026607;AGCD01026608;AGCD01026609;AGCD01026610;AGCD01026611;AGCD01026612;AGCD01026613;AGCD01026614;AGCD01026615;AGCD01026616;GBDF01125379;XM_013514960;XM_013514961 XP_013370414;XP_013370415 MODEL 9019728 protein-coding LOC102004956 olfactory receptor 5B2-like NW_004955511 3124063 3128525 - 102004956 AGCD01066444;XM_013506383 XP_013361837 MODEL 8851579 protein-coding Hes2 hes family bHLH transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog) NW_004955486 6158863 6161289 + 102011549 AGCD01059109;GBDF01224950;XM_005404093;XM_005404094;XM_005404095 XP_005404150;XP_005404151;XP_005404152 MODEL 9019794 protein-coding Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); GPI anchor phospholipase D activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to cholesterol (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955483 2501751 2552855 + 102007554 AGCD01057679;AGCD01057680;GBCB01012012;GBCE01171043;XM_013503821 XP_013359275 MODEL 10230964 protein-coding CUNH19orf84 chromosome unknown C19orf84 homolog ASSOCIATED WITH COVID-19 (ortholog) NW_004955558 1016920 1019617 + 106147432 AGCD01073411;GBDF01280520;XM_013508903 XP_013364357 MODEL 9008630 pseudo LOC102005302 protein C3orf33 pseudogene NW_004955438 15478440 15479305 - 102005302 AGCD01035370 MODEL 8858899 protein-coding LOC102023181 uncharacterized LOC102023181 NW_004955513 2511446 2531580 + 102023181 AGCD01066880;GBBH01164409;XM_013506574 XP_013362028 MODEL 9000164 ncrna LOC102013598 uncharacterized LOC102013598 NW_004955414 27677164 27679030 - 102013598 AGCD01015664;XR_260199 MODEL 8777023 protein-coding Tsc22d1 TSC22 domain family member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of hematopoietic stem cell proliferation (ortholog); negative regulation of programmed cell death (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955518 2322566 2451519 - 102010937 AGCD01067775;AGCD01067776;AGCD01067777;AGCD01067778;GBDF01010659;GBDF01010660;XM_005409075 XP_005409132 MODEL 39134385 misc_rna 7SK 7SK RNA 8966301 protein-coding LOC102022821 arylacetamide deacetylase-like 4 NW_004955486 1310183 1318687 - 102022821 AGCD01058941;GBDK01044767;XM_005403946 XP_005404003 MODEL 8799882 protein-coding LOC102010896 protocadherin beta-4-like NW_004955415 12626696 12673195 - 102010896 AGCD01016208;AGCD01016209;AGCD01016210;AGCD01016211;AGCD01016212;AGCD01016213;AGCD01016214;AGCD01016215;AGCD01016216;AGCD01016217;AGCD01016218;GBDJ01233417;XM_013512127 XP_013367581 MODEL 8956833 protein-coding Nup58 nucleoporin 58 ENCODES a protein that exhibits identical protein binding (ortholog); nuclear localization sequence binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); regulation of protein import into nucleus (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN nuclear envelope (ortholog); nuclear pore (ortholog); protein-containing complex (ortholog) NW_004955497 4762316 4830320 + 102022943 AGCD01062585;AGCD01062586;GBDF01003783;XM_005406331;XM_005406332;XM_005406333 XP_005406388;XP_005406389;XP_005406390 MODEL 9052661 pseudo LOC102008949 tubulin alpha-1A chain-like NW_004955420 26771001 26771926 - 102008949 AGCD01021431 MODEL 8796185 protein-coding Mllt10 MLLT10 histone lysine methyltransferase DOT1L cofactor ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); nucleosome binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute monocytic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955429 6999333 7163988 - 102013319 AGCD01028575;AGCD01028576;AGCD01028577;AGCD01028578;AGCD01028579;AGCD01028580;AGCD01028581;GBCB01058018;GBDI01176543;XM_013515398;XM_013515399;XM_013515400;XM_013515401;XM_013515402 XP_013370852;XP_013370853;XP_013370854;XP_013370855;XP_013370856 MODEL 8831559 protein-coding Flacc1 flagellum associated containing coiled-coil domains 1 ASSOCIATED WITH anthracosis (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); outer dense fiber (ortholog) NW_004955403 264969 321370 + 102021407 AGCD01001685;AGCD01001686;AGCD01001687;AGCD01001688;GBDK01061068;XM_005373202;XM_013511720;XM_013511724;XM_013511729 XP_005373259;XP_013367174;XP_013367178;XP_013367183 MODEL 8713691 protein-coding Mybl2 MYB proto-oncogene like 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitotic spindle assembly (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Myb complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 13496919 13530689 - 102025300 AGCD01039785;AGCD01039786;GBDF01120059;XM_005392496 XP_005392553 MODEL 8918957 pseudo LOC102012481 uncharacterized LOC102012481 NW_004955446 7640915 7696303 + 102012481 AGCD01040126;AGCD01040127;AGCD01040128 MODEL 9033385 pseudo LOC102021495 vacuole membrane protein 1 pseudogene NW_004955446 12582761 12583969 - 102021495 AGCD01040238 MODEL 8760306 protein-coding Glyatl3 glycine-N-acyltransferase like 3 ENCODES a protein that exhibits glycine N-acyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955410 33444100 33462285 - 102003004 AGCD01011371;GBBH01213825;XM_005377533;XM_005377534 XP_005377590;XP_005377591 MODEL 8732721 protein-coding LOC102003190 class I histocompatibility antigen, B alpha chain-like NW_004955583 377680 382207 + 102003190 AGCD01075815;AGCD01075816;GBCE01000219;GBDK01001528;XM_013509791 XP_013365245 MODEL 8936901 protein-coding Defb1 defensin beta 1 NW_004955403 53844759 53854329 + 102006735 AGCD01003077;GBDK01143936;XM_005373839 XP_005373896 MODEL 10379602 protein-coding Homez homeobox and leucine zipper encoding ENCODES a protein that exhibits DNA binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 37022482 37040420 + 106146301 AGCD01010488;AGCD01010489;GBBH01158683;XM_013510430;XM_013510431;XM_013510432;XM_013510433;XM_013510434;XM_013510435 XP_013365884;XP_013365885;XP_013365886;XP_013365887;XP_013365888;XP_013365889 MODEL 8830410 protein-coding Kif3a kinesin family member 3A ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN alpha-tubulin acetylation (ortholog); anterior/posterior pattern specification (ortholog); anterograde dendritic transport (ortholog); PARTICIPATES IN Hedgehog signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); asthma (ortholog); FOUND IN axon cytoplasm (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955408 4072823 4115975 - 102030602 AGCD01008086;AGCD01008087;AGCD01008088;GBDF01053282;XM_005376105;XM_005376106;XM_005376107 XP_005376162;XP_005376163;XP_005376164 MODEL 10269422 ncrna LOC106147142 uncharacterized LOC106147142 NW_004955522 3219986 3224438 + 106147142 AGCD01068381;GBDF01157855;XR_001231906 MODEL 8913678 ncrna LOC102023550 uncharacterized LOC102023550 NW_004955452 10816383 10890616 - 102023550 AGCD01044304;AGCD01044305;AGCD01044306;AGCD01044307;AGCD01044308;AGCD01044309;AGCD01044310;AGCD01044311;AGCD01044312;AGCD01044313;AGCD01044314;AGCD01044315;GBDF01047563;XR_001236053 MODEL 10369657 protein-coding LOC106149290 translation initiation factor IF-2-like NW_004955442 18319360 18320575 + 106149290 AGCD01038002;AGCD01038003;XM_013517655 XP_013373109 MODEL 8729757 protein-coding LOC102018133 keratin, type II microfibrillar, component 7C-like NW_004955547 2600470 2610128 - 102018133 AGCD01072286;AGCD01072287;XM_013508445 XP_013363899 MODEL 9049061 protein-coding LOC102005985 uncharacterized LOC102005985 NW_004955450 13197296 13199813 + 102005985 AGCD01042729;XM_005393815 XP_005393872 MODEL 8788936 protein-coding CUNH1orf105 chromosome unknown C1orf105 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); urinary bladder cancer (ortholog) NW_004955406 12883547 12919467 + 102029359 AGCD01005928;GBDF01049966;XM_005374859 XP_005374916 MODEL 8924612 protein-coding Ptgr3 prostaglandin reductase 3 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955402 58634433 58642498 - 102014848 AGCD01001535;AGCD01001536;AGCD01001537;GBBH01187216;GBCQ01006883;XM_005373085 XP_005373142 MODEL 8876929 protein-coding Irak4 interleukin 1 receptor associated kinase 4 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-33-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955500 3010505 3039090 + 102005061 AGCD01063725;AGCD01063726;AGCD01063727;GBDF01124062;GBDF01124069;XM_005406580;XM_005406582;XM_005406583;XM_013505686;XM_013505687 XP_005406637;XP_005406639;XP_005406640;XP_013361140;XP_013361141 MODEL 9002349 protein-coding Galnt12 polypeptide N-acetylgalactosaminyltransferase 12 ASSOCIATED WITH Breast Neoplasms (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog) NW_004955419 26760500 26788933 - 102009186 AGCD01020414;GBCQ01071845;GBDI01065505;XM_013513226 XP_013368680 MODEL 10241658 ncrna LOC106150083 uncharacterized LOC106150083 NW_004955464 10884038 10886740 + 106150083 AGCD01050127;XR_001236678 MODEL 8733880 protein-coding Fam89b family with sequence similarity 89 member B ENCODES a protein that exhibits transcription corepressor binding (ortholog); INVOLVED IN establishment of cell polarity (ortholog); negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) NW_004955422 19690806 19693575 - 102020682 AGCD01023028;AGCD01023029;GBBH01063474;XM_013513869 XP_013369323 MODEL 9026929 protein-coding Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 ENCODES a protein that exhibits electron transfer activity (ortholog); NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN cellular respiration (ortholog); mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955457 8838216 8879059 + 102017100 AGCD01046919;GBDF01051033;XM_005396998 XP_005397055 MODEL 8827158 ncrna LOC102006342 uncharacterized LOC102006342 NW_004955415 25402361 25405667 + 102006342 AGCD01016581;GBDF01097468;XR_260314 MODEL 8858932 protein-coding Sf3b6 splicing factor 3b subunit 6 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955469 6275894 6286908 - 102024444 AGCD01052376;AGCD01052377;GBCE01001807;XM_005400375 XP_005400432 MODEL 8838941 protein-coding LOC102010107 protein bunched, class 1/class 3/D/E isoforms-like NW_004955573 470280 471584 + 102010107 AGCD01074980;AGCD01074981;GBDF01228221;XM_005413775 XP_005413832 MODEL 8872467 pseudo LOC102025275 heterogeneous nuclear ribonucleoprotein H3-like NW_004955429 20021277 20022100 - 102025275 AGCD01028976 MODEL 9067964 ncrna LOC102005311 uncharacterized LOC102005311 NW_004955443 3210313 3216060 - 102005311 AGCD01038188;GBDF01281727;XR_262174 MODEL 8987107 protein-coding Snx20 sorting nexin 20 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN early endosome membrane (ortholog) NW_004955433 8725950 8734699 - 102016508 AGCD01031602;GBDJ01170428;XM_005388271 XP_005388328 MODEL 8926501 pseudo LOC102024565 cryptochrome-1 pseudogene NW_004955480 6962604 6964523 - 102024565 AGCD01056693 MODEL 8872871 protein-coding LOC102012064 olfactory receptor 10C1-like NW_004955458 2337356 2338318 - 102012064 AGCD01047225;XM_005397239 XP_005397296 MODEL 9032823 ncrna LOC102003556 uncharacterized LOC102003556 NW_004955420 28596394 28604005 + 102003556 AGCD01021480;AGCD01021481;GBBH01098605;XR_001233725;XR_001233726;XR_001233727;XR_001233728;XR_001233729;XR_001233730;XR_260767;XR_260768 MODEL 8716554 protein-coding Cst8 cystatin 8 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); male infertility (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955415 30459008 30466128 + 102005461 AGCD01016664;GBDF01008792;XM_005380971;XM_005380972 XP_005381028;XP_005381029 MODEL 8861722 protein-coding LOC102018136 myeloid cell surface antigen CD33-like NW_004955559 971745 982328 - 102018136 AGCD01073623;AGCD01073624;AGCD01073625;GBDJ01063533;XM_013508946 XP_013364400 MODEL 9019059 protein-coding Aspm assembly factor for spindle microtubules ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN brain development (ortholog); cerebral cortex development (ortholog); developmental growth (ortholog); ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); Abnormal Reflexes (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955406 33665675 33720468 - 102024187 AGCD01006486;AGCD01006487;GBDK01383873;XM_013521877 XP_013377331 MODEL 39134085 misc_rna 7SK 7SK RNA 39131609 rrna 5S_rRNA 5S ribosomal RNA 39132375 snrna U6 U6 spliceosomal RNA 8844665 protein-coding Dap death associated protein INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955426 398593 452004 - 102005396 AGCD01026001;AGCD01026002;GBCQ01002216;XM_005386121 XP_005386178 MODEL 39132487 rrna 5S_rRNA 5S ribosomal RNA 8976803 protein-coding Ptgs1 prostaglandin-endoperoxide synthase 1 ENCODES a protein that exhibits oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); peroxidase activity (ortholog); prostaglandin-endoperoxide synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); learning (ortholog); maintenance of blood-brain barrier (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Abscess (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) NW_004955419 5678750 5699305 - 102008534 AGCD01019834;GBCQ01066127;XM_005382532;XM_013513294 XP_005382589;XP_013368748 MODEL 8859347 protein-coding Baz2a bromodomain adjacent to zinc finger domain 2A ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin silencing complex (ortholog); NoRC complex (ortholog); nuclear speck (ortholog) NW_004955458 4149610 4186647 - 102011959 AGCD01047379;AGCD01047380;AGCD01047381;GBCE01024577;XM_005397321;XM_005397322;XM_005397324;XM_013520867;XM_013520868 XP_005397378;XP_005397379;XP_005397381;XP_013376321;XP_013376322 MODEL 9001375 protein-coding LOC102004957 ral guanine nucleotide dissociation stimulator-like NW_004955430 7909582 7912000 - 102004957 AGCD01029377;GBDF01163102;XM_013515594 XP_013371048 MODEL 8803593 protein-coding Plekhg6 pleckstrin homology and RhoGEF domain containing G6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell junction (ortholog); cleavage furrow (ortholog) NW_004955413 3969459 3982348 + 102012179 AGCD01013590;AGCD01013591;GBBH01193665;XM_005378757 XP_005378814 MODEL 8845759 protein-coding LOC102012483 olfactory receptor 2B2-like NW_004955576 1406995 1407939 + 102012483 AGCD01075375;XM_005413956 XP_005414013 MODEL 8768987 protein-coding Hes3 hes family bHLH transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN hindbrain morphogenesis (ortholog); in utero embryonic development (ortholog); midbrain development (ortholog); ASSOCIATED WITH thymoma (ortholog) NW_004955486 6272757 6273721 - 102013090 AGCD01059117;XM_005404098 XP_005404155 MODEL 8839737 protein-coding LOC102007856 uncharacterized protein C3orf26 homolog NW_004955407 20972503 20976017 - 102007856 AGCD01007347;XM_013505935 XP_013361389 MODEL 8947792 protein-coding Mllt11 MLLT11 transcription factor 7 cofactor INVOLVED IN extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); high grade glioma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955588 427102 438578 + 102023091 AGCD01076109;AGCD01076110;GBDF01003825;XM_005414488;XM_005414489;XM_013509904;XM_013509905 XP_005414545;XP_005414546;XP_013365358;XP_013365359 MODEL 9059391 protein-coding Wdr72 WD repeat domain 72 INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta hypomaturation type 2A3 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endosome (ortholog) NW_004955409 1451506 1631976 + 102016672 AGCD01009176;AGCD01009177;AGCD01009178;AGCD01009179;AGCD01009180;GBCQ01031346;XM_005376626;XM_013510272;XM_013510273;XM_013510274 XP_005376683;XP_013365726;XP_013365727;XP_013365728 MODEL 8872080 protein-coding LOC102007481 UDP-glucuronosyltransferase 2A3-like NW_004955447 3273792 3279756 + 102007481 AGCD01040590;GBDF01017429;GBDF01017432;XM_013518565 XP_013374019 MODEL 8977650 ncrna LOC102013599 uncharacterized LOC102013599 NW_004955471 11197604 11202115 - 102013599 AGCD01053249;GBBH01075240;XR_001237058 MODEL 9007688 protein-coding LOC102006343 cystatin-C-like NW_004955415 30580664 30583924 - 102006343 AGCD01016666;GBDF01051588;XM_005380974;XR_001233254 XP_005381031 MODEL 8960301 protein-coding Naglu N-acetyl-alpha-glucosaminidase ENCODES a protein that exhibits alpha-N-acetylglucosaminidase activity (ortholog); iron ion sequestering activity (ortholog); INVOLVED IN adult behavior (ortholog); amyloid precursor protein metabolic process (ortholog); aorta development (ortholog); ASSOCIATED WITH aphasia (ortholog); Arnold-Chiari Malformation (ortholog); atrial heart septal defect (ortholog); FOUND IN extracellular exosome (ortholog); lysosomal lumen (ortholog); vacuole (ortholog) NW_004955451 16445338 16449243 + 102027260 AGCD01043677;GBDF01157673;GBDF01157675;XM_013519141 XP_013374595 MODEL 8793229 protein-coding Defb110 defensin beta 110 NW_004955411 7949371 7958604 + 102013592 AGCD01011713;XM_005377927 XP_005377984 MODEL 8972758 pseudo LOC102023553 G patch domain and KOW motifs-containing protein pseudogene NW_004955452 13842387 13843344 + 102023553 AGCD01044437 MODEL 8849822 protein-coding Kif3b kinesin family member 3B ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cilium assembly (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); fundus dystrophy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955422 28738567 28779584 - 102009622 AGCD01023368;GBDJ01272072;XM_005384873;XM_005384874;XM_013514112 XP_005384930;XP_005384931;XP_013369566 MODEL 8918931 protein-coding Hook1 hook microtubule tethering protein 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); early endosome to late endosome transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); FHF complex (ortholog); HOPS complex (ortholog) NW_004955464 47895 129414 - 102012412 AGCD01049920;AGCD01049921;AGCD01049922;AGCD01049923;AGCD01049924;AGCD01049925;AGCD01049926;AGCD01049927;GBDI01117530;XM_005398478 XP_005398535 MODEL 9045840 protein-coding LOC102005986 cytochrome P450 2B6-like NW_004955642 41045 46562 - 102005986 AGCD01077714;AGCD01077715;GBBH01208704;XM_005415047 XP_005415104 MODEL 10178222 protein-coding CUNH1orf115 chromosome unknown C1orf115 homolog INVOLVED IN regulation of response to drug (ortholog); ASSOCIATED WITH COVID-19 (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog) NW_004955520 3064235 3065978 - 106147121 AGCD01068093;GBCQ01007383;XM_013507062 XP_013362516 MODEL 8881027 protein-coding LOC102010898 creatine kinase U-type, mitochondrial NW_004955416 10117075 10122968 + 102010898 AGCD01017108;AGCD01017109;GBDJ01024945;XM_013512557;XM_013512558 XP_013368011;XP_013368012 MODEL 8984867 protein-coding Gpm6a glycoprotein M6A ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN neural retina development (ortholog); neuron migration (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axonal growth cone (ortholog); filopodium (ortholog); glutamatergic synapse (ortholog) NW_004955403 31704540 31997382 + 102018878 AGCD01002423;AGCD01002424;GBDK01190623;XM_005373524;XM_005373525 XP_005373581;XP_005373582 MODEL 8868043 protein-coding Bmi1 BMI1 proto-oncogene, polycomb ring finger ENCODES a protein that exhibits chromatin binding (ortholog); promoter-specific chromatin binding (ortholog); RING-like zinc finger domain binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); chronic pancreatitis (ortholog); FOUND IN cytoplasm (ortholog); heterochromatin (ortholog); nuclear body (ortholog) NW_004955429 6548586 6553730 - 102017361 AGCD01028551;GBDK01001879;GBDK01001881;XM_013515495 XP_013370949 MODEL 9004115 protein-coding LOC102023188 vomeronasal type-2 receptor 116-like NW_004955524 386953 419114 - 102023188 AGCD01068676;AGCD01068677;GBBH01069707;XM_013507330 XP_013362784 MODEL 8762508 protein-coding Glyctk glycerate kinase ENCODES a protein that exhibits glycerate kinase activity (ortholog); INVOLVED IN fructose catabolic process (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); D-glyceric aciduria (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955532 3933964 3939858 + 102028574 AGCD01070305;GBDF01189334;XM_005410350;XM_005410351;XM_005410352;XM_005410353;XM_005410354 XP_005410407;XP_005410408;XP_005410409;XP_005410410;XP_005410411 MODEL 8838810 ncrna LOC102003191 uncharacterized LOC102003191 NW_004955402 40910787 40919051 - 102003191 AGCD01001005;GBDF01110513;XR_259082 MODEL 8990424 protein-coding LOC102025276 olfactory receptor 4C15-like NW_004955511 248515 251927 + 102025276 AGCD01066325;XM_013506350 XP_013361804 MODEL 10168797 ncrna LOC106149291 uncharacterized LOC106149291 NW_004955442 15171354 15173401 - 106149291 AGCD01037860;GBDK01200942;XR_001235359 MODEL 8706237 protein-coding Tsc22d2 TSC22 domain family member 2 INVOLVED IN negative regulation of cell cycle (ortholog); response to osmotic stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955448 1639463 1678279 + 102024397 AGCD01041265;GBCE01089585;GBDI01261302;XM_013518634 XP_013374088 MODEL 8861340 pseudo LOC102005312 uncharacterized LOC102005312 NW_004955443 13092892 13167982 + 102005312 AGCD01038462;AGCD01038463;AGCD01038464 MODEL 9027148 pseudo LOC102007484 arylacetamide deacetylase-like 2 pseudogene NW_004955448 3318723 3319795 - 102007484 AGCD01041327 MODEL 8798465 protein-coding Sfi1 SFI1 centrin binding protein ENCODES a protein that exhibits phosphatase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955455 5667105 5744878 + 102012729 AGCD01045746;AGCD01045747;AGCD01045748;AGCD01045749;AGCD01045750;AGCD01045751;GBDK01319767;XM_005396332;XM_013520407;XM_013520408;XM_013520409;XM_013520410;XM_013520412;XM_013520413;XM_013520414;XM_013520415;XM_013520416;XM_013520417 XP_005396389;XP_013375861;XP_013375862;XP_013375863;XP_013375864;XP_013375866;XP_013375867;XP_013375868;XP_013375869;XP_013375870;XP_013375871 MODEL 10276430 ncrna LOC106150084 uncharacterized LOC106150084 NW_004955464 3065871 3081167 + 106150084 AGCD01049970;GBCB01073547;XR_001236680 MODEL 39134086 misc_rna 7SK 7SK RNA 9019446 protein-coding Flad1 flavin adenine dinucleotide synthetase 1 ENCODES a protein that exhibits FMN adenylyltransferase activity (ortholog); identical protein binding (ortholog); NADH pyrophosphatase activity (ortholog); INVOLVED IN FAD biosynthetic process (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955545 1487929 1495808 + 102017387 AGCD01071856;AGCD01071857;GBDF01155147;XM_005411537;XM_005411538;XM_013508294 XP_005411594;XP_005411595;XP_013363748 MODEL 8758958 protein-coding Galnt13 polypeptide N-acetylgalactosaminyltransferase 13 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); protein O-linked glycosylation via N-acetylgalactosamine (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); Hepatomegaly (ortholog); lung cancer (ortholog) NW_004955440 18993723 19428483 + 102011249 AGCD01036625;AGCD01036626;AGCD01036627;AGCD01036628;AGCD01036629;AGCD01036630;AGCD01036631;AGCD01036632;AGCD01036633;AGCD01036634;GBDF01017216;XM_005390819;XM_013517497;XM_013517499 XP_005390876;XP_013372951;XP_013372953 MODEL 8895000 protein-coding Fam8a1 family with sequence similarity 8 member A1 ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN Hrd1p ubiquitin ligase complex (ortholog) NW_004955483 8460337 8469632 - 102022704 AGCD01057836;AGCD01057837;GBDF01082503;XM_013503833 XP_013359287 MODEL 9022670 protein-coding LOC102003559 HRAS-like suppressor 2 NW_004955422 21458082 21474996 + 102003559 AGCD01023119;AGCD01023120;AGCD01023121;GBBH01000367;XM_005384675;XM_013514294;XM_013514295;XM_013514296 XP_005384732;XP_013369748;XP_013369749;XP_013369750 MODEL 39132489 rrna 5S_rRNA 5S ribosomal RNA 8706442 protein-coding Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); oxygen sensor activity (ortholog); INVOLVED IN cellular response to oxygen levels (ortholog); gliogenesis (ortholog); mitochondrial ATP synthesis coupled electron transport (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH cardiomyopathy (ortholog); Experimental Diabetes Mellitus (ortholog); Familial Prostate Cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955468 12961873 12971278 + 102007000 AGCD01052194;GBCB01088834;XM_005400268 XP_005400325 MODEL 8915487 pseudo LOC102012486 histone H3.1-like NW_004955581 100297 101951 + 102012486 AGCD01075657 MODEL 8802648 protein-coding Baz2b bromodomain adjacent to zinc finger domain 2B ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955449 14008538 14278227 + 102004438 AGCD01042156;AGCD01042157;AGCD01042158;AGCD01042159;AGCD01042160;AGCD01042161;AGCD01042162;AGCD01042163;GBDK01140899;XM_013518699;XM_013518700;XM_013518701;XM_013518702;XM_013518703;XM_013518704;XM_013518705 XP_013374153;XP_013374154;XP_013374155;XP_013374156;XP_013374157;XP_013374158;XP_013374159 MODEL 10184950 ncrna LOC106147143 uncharacterized LOC106147143 NW_004955522 3333872 3353025 - 106147143 AGCD01068381;GBDF01139727;XR_001231911 MODEL 9046941 ncrna LOC102022824 uncharacterized LOC102022824 NW_004955422 2965683 2972553 + 102022824 AGCD01022497;GBCQ01021642;XR_001233980;XR_260849 MODEL 8974694 protein-coding LOC102007857 gamma-crystallin A NW_004955457 6963680 6966414 + 102007857 AGCD01046861;XM_005396969 XP_005397026 MODEL 8902238 protein-coding LOC102006347 syncytin-1-like NW_004955417 31573854 31588270 + 102006347 AGCD01018657;GBDF01112288;GBDK01015773;XM_005381976;XM_013512777 XP_005382033;XP_013368231 MODEL 9016581 pseudo LOC102013602 zinc finger protein 14-like NW_004955415 31469208 31473139 - 102013602 AGCD01016676;AGCD01016677 MODEL 8776788 protein-coding Snx21 sorting nexin family member 21 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN early endosome membrane (ortholog) NW_004955445 11454802 11462625 - 102027584 AGCD01039695;GBDJ01139116;XM_005392407 XP_005392464 MODEL 10390381 protein-coding LOC106149292 uncharacterized LOC106149292 NW_004955442 14213751 14217945 - 106149292 AGCD01037806;GBDJ01368243;XM_013517698 XP_013373152 MODEL 39131610 rrna 5S_rRNA 5S ribosomal RNA 39132377 snrna U6 U6 spliceosomal RNA 8892476 protein-coding LOC102021499 zinc finger protein 39-like NW_004955581 3067 74785 - 102021499 AGCD01075654;AGCD01075655;AGCD01075656;GBDI01011076;XM_013509735 XP_013365189 MODEL 8927112 protein-coding Mybpc1 myosin binding protein C1 ENCODES a protein that exhibits myosin binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955405 36992798 37066154 + 102026938 AGCD01005432;AGCD01005433;AGCD01005434;AGCD01005435;GBCB01007207;XM_005374551;XM_005374552;XM_005374553;XM_005374554;XM_005374555;XM_005374556;XM_005374557;XM_005374558;XM_005374559 XP_005374608;XP_005374609;XP_005374610;XP_005374611;XP_005374612;XP_005374613;XP_005374614;XP_005374615;XP_005374616 MODEL 39134386 misc_rna 7SK 7SK RNA 8952179 pseudo LOC102010899 dnaJ homolog subfamily B member 6-like NW_004955477 2188830 2190566 + 102010899 AGCD01055518;XR_263678 MODEL 8929758 protein-coding Aspn asporin ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN bone mineralization (ortholog); negative regulation of tooth mineralization (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); degenerative disc disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell projection (ortholog); extracellular matrix (ortholog) NW_004955515 5322074 5345715 + 102027220 AGCD01067348;GBDK01137117;XM_005408906 XP_005408963 MODEL 8833910 protein-coding Ptgs2 prostaglandin-endoperoxide synthase 2 ENCODES a protein that exhibits enzyme binding (ortholog); heme binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Abscess (ortholog); acute kidney failure (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955406 25077988 25086259 - 102014110 AGCD01006213;AGCD01006214;GBCQ01175625;GBDJ01276049;XM_005375091 XP_005375148 MODEL 8978359 protein-coding LOC102010109 olfactory receptor 1D2-like NW_004955580 1150676 1151682 - 102010109 AGCD01075649;XM_005414224 XP_005414281 MODEL 39134087 misc_rna 7SK 7SK RNA 8757659 protein-coding Flcn folliculin ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell-cell junction assembly (ortholog); cellular response to amino acid starvation (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Birt-Hogg-Dube syndrome (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell-cell contact zone (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955577 672774 694140 + 102019651 AGCD01075409;AGCD01075410;GBCE01099409;XM_005413976;XM_005413977;XM_005413978 XP_005414033;XP_005414034;XP_005414035 MODEL 8812398 protein-coding Nup62 nucleoporin 62 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular senescence (ortholog); centriole assembly (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH primary biliary cholangitis (ortholog); Striatonigral Degeneration, Infantile (ortholog); FOUND IN annulate lamellae (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955559 1012919 1033465 + 102026360 AGCD01073626;XM_005412811;XM_005412812;XM_013508966;XM_013508967 XP_005412868;XP_005412869;XP_013364420;XP_013364421 MODEL 8880823 pseudo LOC102023190 akirin-1 pseudogene NW_004955531 3639705 3640290 + 102023190 AGCD01070077 MODEL 8962215 protein-coding Gpm6b glycoprotein M6B INVOLVED IN extracellular matrix assembly (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of serotonin uptake (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) NW_004955519 4287203 4432188 + 102021792 AGCD01067981;AGCD01067982;GBCE01135500;XM_005409191;XM_005409192;XM_005409194;XM_005409195;XM_013506990;XM_013506991 XP_005409248;XP_005409249;XP_005409251;XP_005409252;XP_013362444;XP_013362445 MODEL 8829506 protein-coding Nagpa N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase INVOLVED IN secretion of lysosomal enzymes (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955442 12513993 12520604 + 102028342 AGCD01037737;AGCD01037738;GBDJ01280013;XM_005391256 XP_005391313 MODEL 8939668 pseudo LOC102018140 PDZ and LIM domain protein 1-like NW_004955448 372904 378142 + 102018140 AGCD01041230 MODEL 8999303 protein-coding Glyr1 glyoxylate reductase 1 homolog ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); DNA binding (ortholog); INVOLVED IN transcription elongation-coupled chromatin remodeling (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955442 12654805 12694090 + 102030006 AGCD01037743;AGCD01037744;AGCD01037745;GBDI01113542;XM_005391261;XM_005391262;XM_005391263;XM_005391264 XP_005391318;XP_005391319;XP_005391320;XP_005391321 MODEL 8835999 protein-coding Bbc3 BCL2 binding component 3 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH brain ischemia (ortholog); Burkitt lymphoma (ortholog); Esophageal Neoplasms (ortholog); FOUND IN lysosome (ortholog); mitochondrion (ortholog) NW_004955574 1167790 1174966 - 102005648 AGCD01075159;AGCD01075160;GBDF01158488;XM_005413854;XM_013509578 XP_005413911;XP_013365032 MODEL 39131443 protein-coding DEFB113 defensin beta 113 8923284 protein-coding Kif3c kinesin family member 3C ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); atrial fibrillation (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); growth cone (ortholog) NW_004955469 7960224 8001161 - 102008840 AGCD01052441;AGCD01052442;GBDJ01220336;XM_005400416 XP_005400473 MODEL 8705710 protein-coding LOC102005997 keratin-associated protein 20-2-like NW_004955407 30123405 30123560 + 102005997 AGCD01007628;XM_005375637 XP_005375694 MODEL 8831292 pseudo LOC102007485 BTB/POZ domain-containing protein 7 pseudogene NW_004955588 764940 776028 - 102007485 AGCD01076122 MODEL 10175460 protein-coding LOC106147144 uncharacterized LOC106147144 NW_004955523 4315463 4317866 - 106147144 AGCD01068642;GBBH01074619;GBCE01083254;XM_013507113 XP_013362567 MODEL 8831349 protein-coding Dap3 death associated protein 3 ENCODES a protein that exhibits GTPase activity (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); mitochondrial translation (ortholog); PARTICIPATES IN Trail mediated signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955545 1951008 1981174 + 102010094 AGCD01071876;GBBH01005546;XM_005411615 XP_005411672 MODEL 8762004 ncrna LOC102004962 uncharacterized LOC102004962 NW_004955432 17596653 17600631 - 102004962 AGCD01031128;GBDF01122165;XR_261532 MODEL 8860668 protein-coding Hes5 hes family bHLH transcription factor 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); brain development (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); diabetes mellitus (ortholog); nervous system disease (ortholog) NW_004955486 8700212 8701581 + 102006137 AGCD01059154;GBCQ01054019;XM_005404164 XP_005404221 MODEL 9049218 protein-coding Wdr73 WD repeat domain 73 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); nucleus organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Athetosis (ortholog); cervical cancer (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 14471479 14485416 + 102012643 AGCD01017270;AGCD01017271;GBCB01039745;XM_005381498 XP_005381555 MODEL 8722973 protein-coding Plekhg7 pleckstrin homology and RhoGEF domain containing G7 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog) NW_004955405 29703523 29760551 + 102022562 AGCD01005256;GBDJ01353997;XM_005374457;XM_005374459;XM_005374460;XM_013518255;XM_013518257;XM_013518258;XM_013518264;XM_013518269;XM_013518275 XP_005374514;XP_005374516;XP_005374517;XP_013373709;XP_013373711;XP_013373712;XP_013373718;XP_013373723;XP_013373729 MODEL 39132494 rrna 5S_rRNA 5S ribosomal RNA 8910354 ncrna LOC102008951 uncharacterized LOC102008951 NW_004955420 29155972 29159064 - 102008951 AGCD01021493;GBCB01016080;XR_260771 MODEL 8772615 pseudo LOC102012067 high mobility group protein B1 pseudogene NW_004955409 17116938 17117921 - 102012067 AGCD01009766;XR_259785 MODEL 39134387 misc_rna 7SK 7SK RNA 9017909 pseudo LOC102003193 proliferation-associated protein 2G4 pseudogene NW_004955450 4817696 4818898 + 102003193 AGCD01042479;AGCD01042480 MODEL 8785547 protein-coding Mllt3 MLLT3 super elongation complex subunit ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H3K18ac reader activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); gene expression (ortholog); hematopoietic stem cell differentiation (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955434 22594681 22873826 - 102029659 AGCD01032680;AGCD01032681;AGCD01032682;AGCD01032683;AGCD01032684;AGCD01032685;AGCD01032686;AGCD01032687;GBDF01007293;GBDF01007303;XM_005388737 XP_005388794 MODEL 9048727 protein-coding Mybpc2 myosin binding protein C2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955559 681004 703163 - 102018135 AGCD01073607;AGCD01073608;GBCQ01185742;XM_005412781;XM_005412782;XM_013509020 XP_005412838;XP_005412839;XP_013364474 MODEL 8857232 ncrna LOC102025278 uncharacterized LOC102025278 NW_004955513 3497931 3501438 - 102025278 AGCD01066906;GBDF01195803;XR_264468 MODEL 8968803 protein-coding Ireb2 iron responsive element binding protein 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); iron-responsive element binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to hypoxia (ortholog); cellular response to iron(III) ion (ortholog); PARTICIPATES IN doxorubicin response pathway; ferroptosis pathway; iron homeostasis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anemia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 852554 898908 + 102010110 AGCD01042344;AGCD01042345;GBDF01157505;XM_005393448 XP_005393505 MODEL 8702945 pseudo LOC102005316 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial pseudogene NW_004955445 11834175 11839386 - 102005316 AGCD01039717;XM_005392425 MODEL 8823307 pseudo LOC102012068 ribose-phosphate pyrophosphokinase 1-like NW_004955409 26469788 26470881 - 102012068 AGCD01010186 MODEL 9015132 protein-coding Csta cystatin A ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); keratinocyte differentiation (ortholog); negative regulation of proteolysis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); eosinophilic chronic rhinosinusitis (ortholog); genetic disease (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955427 21617099 21630712 + 102009201 AGCD01027452;GBDI01078018;XM_005386507 XP_005386564 MODEL 8936900 pseudo LOC102006348 transcription factor 4 pseudogene NW_004955418 11676381 11678020 + 102006348 AGCD01019007 MODEL 8819676 protein-coding Tsc22d3 TSC22 domain family member 3 ENCODES a protein that exhibits MRF binding (ortholog); INVOLVED IN body fluid secretion (ortholog); negative regulation of activation-induced cell death of T cells (ortholog); negative regulation of skeletal muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955490 8177356 8238373 + 102017672 AGCD01060277;GBCE01115007;GBDF01157293;XM_005404695 XP_005404752 MODEL 8949998 protein-coding Snx22 sorting nexin 22 ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); osteogenesis imperfecta (ortholog) NW_004955450 11246817 11248870 - 102010010 AGCD01042652;GBBH01150804;GBDK01011077;XM_013519037;XM_013519038;XR_001235925 XP_013374491;XP_013374492 MODEL 8712742 protein-coding CUNH1orf122 chromosome unknown C1orf122 homolog ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog) NW_004955452 15579225 15580362 + 102014638 AGCD01044488;GBDF01049582;XM_005395219 XP_005395276 MODEL 9042378 protein-coding Defb115 defensin beta 115 NW_004955422 29676981 29681067 + 102007030 AGCD01023407;XM_005384994 XP_005385051 MODEL 8846969 protein-coding Fam91a1 family with sequence similarity 91 member A1 INVOLVED IN intracellular protein transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); trans-Golgi network (ortholog) NW_004955540 2561695 2600144 + 102004422 AGCD01071321;AGCD01071322;AGCD01071323;GBCB01034996;XM_005410932 XP_005410989 MODEL 39134088 misc_rna 7SK 7SK RNA 8968169 protein-coding LOC102010112 small proline-rich protein 2F-like NW_004955592 331537 332801 + 102010112 AGCD01076304;GBDI01097716;XM_005414612 XP_005414669 MODEL 8721807 ncrna LOC102012487 uncharacterized LOC102012487 NW_004955449 15407328 15451351 + 102012487 AGCD01042194;XR_262507 MODEL 9001870 protein-coding Hook2 hook microtubule tethering protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955415 31855183 31865413 - 102021238 AGCD01016699;GBBH01142587;XM_005381026;XM_013512286;XM_013512287 XP_005381083;XP_013367740;XP_013367741 MODEL 8933501 pseudo LOC102007860 60S ribosomal protein L5-like NW_004955408 33188427 33213642 + 102007860 AGCD01008863 MODEL 8967823 protein-coding Sfmbt1 Scm like with four mbt domains 1 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of muscle organ development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 2850149 3014859 - 102027772 AGCD01029182;AGCD01029183;AGCD01029184;AGCD01029185;AGCD01029186;AGCD01029187;GBBH01041099;GBDF01043456;XM_013515695;XM_013515696 XP_013371149;XP_013371150 MODEL 10393531 ncrna LOC106150085 uncharacterized LOC106150085 NW_004955464 3081169 3083506 + 106150085 AGCD01049970;GBDF01305404;XR_001236681 MODEL 8942995 ncrna LOC102012069 uncharacterized LOC102012069 NW_004955410 7679839 7699275 + 102012069 AGCD01010721;AGCD01010722;GBCE01185810;XR_259825 MODEL 39132378 snrna U6 U6 spliceosomal RNA 8849679 ncrna LOC102006000 uncharacterized LOC102006000 NW_004955408 27481149 27486049 + 102006000 AGCD01008679;GBDF01076903;XR_259721 MODEL 8911149 protein-coding LOC102006353 sodium- and chloride-dependent transporter XTRP3A NW_004955420 26159281 26191883 + 102006353 AGCD01021392;GBCE01175467;XM_005383468 XP_005383525 MODEL 8979061 protein-coding LOC102003561 BPI fold-containing family A member 2-like NW_004955422 27993083 28136036 + 102003561 AGCD01023340;AGCD01023341;AGCD01023342;AGCD01023343;GBBH01222071;XM_005384852;XM_013514264;XM_013514265;XM_013514266;XM_013514267;XM_013514268;XM_013514269;XM_013514270;XM_013514271;XM_013514273;XM_013514274;XM_013514275 XP_005384909;XP_013369718;XP_013369719;XP_013369720;XP_013369721;XP_013369722;XP_013369723;XP_013369724;XP_013369725;XP_013369727;XP_013369728;XP_013369729 MODEL 9043676 pseudo LOC102004965 desumoylating isopeptidase 2-like NW_004955521 50420 60020 - 102004965 AGCD01068127;AGCD01068128 MODEL 8772045 protein-coding Tsc22d4 TSC22 domain family member 4 INVOLVED IN glucose homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron cellular homeostasis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); nucleus (ortholog) NW_004955573 414984 425480 + 102023089 AGCD01074976;AGCD01074977;GBDK01081440;XM_005413727;XM_013509480 XP_005413784;XP_013364934 MODEL 9057280 protein-coding Ndufs3 NADH:ubiquinone oxidoreductase core subunit S3 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); reactive oxygen species metabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955422 713370 717926 - 102018838 AGCD01022432;GBCE01030985;XM_005383959 XP_005384016 MODEL 8980964 protein-coding Hes6 hes family bHLH transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955542 2373241 2374827 + 102015451 AGCD01071520;AGCD01071521;GBCB01024654;GBCQ01066374;XM_005411246 XP_005411303 MODEL 9061812 protein-coding Nup62cl nucleoporin 62 C-terminal like ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955490 8807866 8904153 + 102020347 AGCD01060297;AGCD01060298;GBDK01264773;XM_005404702;XM_005404703;XM_005404704 XP_005404759;XP_005404760;XP_005404761 MODEL 8801184 pseudo LOC102008958 AN1-type zinc finger protein 3-like NW_004955497 478857 481296 + 102008958 AGCD01062416 MODEL 8901865 protein-coding Plekhh1 pleckstrin homology, MyTH4 and FERM domain containing H1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955466 2616627 2653804 - 102014029 AGCD01050750;AGCD01050751;GBDJ01316571;XM_013521892 XP_013377346 MODEL 8928036 ncrna LOC102013605 uncharacterized LOC102013605 NW_004955478 10038664 10039724 - 102013605 AGCD01056117;GBDF01253856;XR_263713 MODEL 8877832 protein-coding Gpn1 GPN-loop GTPase 1 ENCODES a protein that exhibits GTPase activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955469 9580068 9602575 + 102008305 AGCD01052510;GBDI01220811;XM_005400514;XM_005400515 XP_005400571;XP_005400572 MODEL 8928071 protein-coding Mllt6 MLLT6, PHD finger containing ENCODES a protein that exhibits histone binding (ortholog); nucleosome binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of urine volume (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955451 13793396 13813913 + 102017732 AGCD01043506;GBBH01033241;GBCE01055005;XM_005394276;XM_005394277;XM_013519371 XP_005394333;XP_005394334;XP_013374825 MODEL 8714363 protein-coding Mybpc3 myosin binding protein C3 ENCODES a protein that exhibits identical protein binding (ortholog); myosin binding (ortholog); myosin heavy chain binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); heart morphogenesis (ortholog); myosin filament assembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); anxiety disorder (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN A band (ortholog); cardiac myofibril (ortholog); myofibril (ortholog) NW_004955422 888529 902074 + 102023370 AGCD01022442;GBDJ01045183;XM_005383977;XM_013514330 XP_005384034;XP_013369784 MODEL 8993004 protein-coding Irf1 interferon regulatory factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN apoptotic process (ortholog); canonical NF-kappaB signal transduction (ortholog); CD8-positive, alpha-beta T cell differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; Jak-Stat signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH allergic conjunctivitis (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955408 3882282 3887965 - 102029590 AGCD01008079;GBCQ01125407;GBDK01000102;XM_005376102 XP_005376159 MODEL 8759327 protein-coding LOC102023555 zinc finger protein 654 NW_004955407 5356497 5435908 - 102023555 AGCD01006914;GBDK01429984;XM_005375530;XM_005375531;XM_005375532;XM_005375534 XP_005375587;XP_005375588;XP_005375589;XP_005375591 MODEL 9049567 protein-coding Nags N-acetylglutamate synthase ENCODES a protein that exhibits L-glutamate N-acetyltransferase activity, acting on acetyl-CoA as donor (ortholog); INVOLVED IN glutamate metabolic process (ortholog); intracellular glutamate homeostasis (ortholog); urea cycle (ortholog); ASSOCIATED WITH amino acid metabolic disorder (ortholog); autistic disorder (ortholog); cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 17182392 17186187 + 102007078 AGCD01043728;GBCQ01042945;XM_005394511;XM_005394512 XP_005394568;XP_005394569 MODEL 8917757 protein-coding LOC102024566 chromosome unknown open reading frame, human C17orf75 INVOLVED IN intracellular protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); trans-Golgi network (ortholog) NW_004955481 7281735 7293246 - 102024566 AGCD01057058;AGCD01057059;GBBH01001483;XM_005402816;XM_013503453 XP_005402873;XP_013358907 MODEL 10148732 protein-coding LOC106149293 uncharacterized LOC106149293 NW_004955442 3106485 3125009 + 106149293 AGCD01037496;XM_013517704 XP_013373158 MODEL 8936968 protein-coding Bbip1 BBSome interacting protein 1 INVOLVED IN B cell homeostasis (ortholog); cilium assembly (ortholog); eating behavior (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 18 (ortholog); cone-rod dystrophy (ortholog); hypogonadotropic hypogonadism (ortholog); FOUND IN BBSome (ortholog); ciliary basal body (ortholog); ciliary membrane (ortholog) NW_004955485 518161 530575 + 102011009 AGCD01058451;AGCD01058452;GBDF01050063;GBDK01146124;XM_005403735 XP_005403792 MODEL 39131611 rrna 5S_rRNA 5S ribosomal RNA 8702615 protein-coding Galnt14 polypeptide N-acetylgalactosaminyltransferase 14 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955469 12650191 12865779 - 102022488 AGCD01052585;AGCD01052586;AGCD01052587;GBDI01278263;XM_005400557;XM_005400558;XM_005400559 XP_005400614;XP_005400615;XP_005400616 MODEL 8919221 protein-coding Kif4a kinesin family member 4A INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); midbody (ortholog) NW_004955475 9845633 9969965 + 102023469 AGCD01055075;AGCD01055076;AGCD01055077;AGCD01055078;AGCD01055079;GBDF01261503;XM_005401621 XP_005401678 MODEL 8828127 ncrna LOC102010901 uncharacterized LOC102010901 NW_004955416 18447091 18476171 + 102010901 AGCD01017406;GBDF01227734;XR_260392 MODEL 8964960 protein-coding Pth parathyroid hormone ENCODES a protein that exhibits hormone activity (ortholog); parathyroid hormone receptor binding (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN parathyroid hormone signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 28828389 28831417 - 102020327 AGCD01015689;GBDF01224218;XM_005380323 XP_005380380 MODEL 9007885 protein-coding Bmp1 bone morphogenetic protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN positive regulation of cartilage development (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute Otitis Media (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955403 45660591 45693724 + 102015913 AGCD01002826;GBBH01142618;GBCE01002413;XM_013513783 XP_013369237 MODEL 39134388 misc_rna 7SK 7SK RNA 39132500 rrna 5S_rRNA 5S ribosomal RNA 8809712 protein-coding Sfmbt2 Scm like with four mbt domains 2 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 23691648 23913781 - 102006670 AGCD01022193;AGCD01022194;AGCD01022195;AGCD01022196;AGCD01022197;AGCD01022198;AGCD01022199;GBDI01384258;XM_005383870;XM_005383871;XM_013513767;XM_013513768;XM_013513769;XM_013513771;XM_013513772;XM_013513773 XP_005383927;XP_005383928;XP_013369221;XP_013369222;XP_013369223;XP_013369225;XP_013369226;XP_013369227 MODEL 8704123 ncrna LOC102023192 uncharacterized LOC102023192 NW_004955437 3136338 3136884 - 102023192 AGCD01034298;GBDF01194081;XR_001235054 MODEL 8821599 protein-coding LOC102022829 guanylate-binding protein 6-like NW_004955423 5119689 5138855 - 102022829 AGCD01023555;AGCD01023556;GBDK01038421;XM_005385353 XP_005385410 MODEL 8762173 protein-coding Fli1 Fli-1 proto-oncogene, ETS transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); megakaryocyte development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Epistaxis (ortholog); Ewing sarcoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 29653621 29773412 + 102012178 AGCD01013284;AGCD01013285;AGCD01013286;GBDK01013563;XM_005378532;XM_013511152;XM_013511153 XP_005378589;XP_013366606;XP_013366607 MODEL 8893359 pseudo LOC102025284 NAD-dependent malic enzyme, mitochondrial pseudogene NW_004955525 4345346 4349829 + 102025284 AGCD01069189 MODEL 8802981 protein-coding Gm2a GM2 ganglioside activator ENCODES a protein that exhibits beta-N-acetylgalactosaminidase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN ganglioside catabolic process (ortholog); ganglioside metabolic process (ortholog); learning or memory (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); GM2 gangliosidosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955408 2442406 2449426 - 102013695 AGCD01008006;GBCB01075592;GBCE01028873;XM_013508167 XP_013363621 MODEL 8865912 protein-coding LOC102018145 cytochrome P450 4V2 INVOLVED IN fatty acid omega-oxidation (ortholog); ASSOCIATED WITH Bietti crystalline corneoretinal dystrophy (ortholog); cervical cancer (ortholog); corneal dystrophy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955403 22870299 22912221 - 102018145 AGCD01002231;AGCD01002232;AGCD01002233;GBCE01187980;GBDK01126781;XM_005373433 XP_005373490 MODEL 8734060 pseudo LOC102005317 tubulin alpha-1C chain-like NW_004955569 1268620 1269973 + 102005317 AGCD01074645 MODEL 8822821 ncrna LOC102021500 uncharacterized LOC102021500 NW_004955449 3631986 3636241 + 102021500 AGCD01041858;GBDF01211884;XR_262486 MODEL 8726987 pseudo LOC102023558 elongation factor 1-alpha 1 pseudogene NW_004955457 3190550 3192322 + 102023558 AGCD01046765 MODEL 10310682 ncrna LOC106149294 uncharacterized LOC106149294 NW_004955442 3517903 3535767 - 106149294 AGCD01037507;XR_001235365 MODEL 8952435 protein-coding Dapk1 death associated protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to hydroperoxide (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); DAPK1-calmodulin complex (ortholog) NW_004955432 29925 254327 - 102021789 AGCD01030554;AGCD01030555;AGCD01030556;AGCD01030557;AGCD01030558;AGCD01030559;AGCD01030560;GBDJ01028198;XM_013516025;XM_013516026;XM_013516027 XP_013371479;XP_013371480;XP_013371481 MODEL 8754373 protein-coding Aspnat aspartate N-acetyltransferase ENCODES a protein that exhibits L-aspartate N-acetyltransferase activity (ortholog); INVOLVED IN acetate metabolic process (ortholog); aspartate metabolic process (ortholog); positive regulation of dopamine uptake involved in synaptic transmission (ortholog); ASSOCIATED WITH microcephaly (ortholog); N-Acetylaspartate Deficiency (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial matrix (ortholog) NW_004955514 1207310 1213732 + 102021269 AGCD01067041;GBCE01176411;GBCQ01097994;XM_013506831 XP_013362285 MODEL 8962200 protein-coding Snx24 sorting nexin 24 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955521 1006353 1126062 + 102021382 AGCD01068167;AGCD01068168;AGCD01068169;AGCD01068170;AGCD01068171;AGCD01068172;AGCD01068173;GBCB01022225;XM_013507082;XM_013507083;XM_013507084 XP_013362536;XP_013362537;XP_013362538 MODEL 39131556 protein-coding DEFB116 defensin beta 116 8856723 protein-coding LOC102006354 small ubiquitin-related modifier 2-like NW_004955491 597140 597413 + 102006354 AGCD01060341;XM_005404728;XM_005404729 XP_005404785;XP_005404786 MODEL 9027258 pseudo LOC102010903 60S ribosomal protein L18a pseudogene NW_004955481 3813679 3814552 + 102010903 AGCD01056916 MODEL 8948531 protein-coding LOC102003196 alanyl-tRNA editing protein Aarsd1-like NW_004955451 16762844 16769585 - 102003196 AGCD01043704;AGCD01043705;GBDJ01008508;XM_013519243 XP_013374697 MODEL 8852310 pseudo LOC102003562 olfactory receptor 140-like NW_004955422 257720 265363 - 102003562 AGCD01022401 MODEL 39134089 misc_rna 7SK 7SK RNA 8896886 protein-coding Kif5a kinesin family member 5A ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 25 (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); central region of growth cone (ortholog) NW_004955458 5264274 5310962 + 102030391 AGCD01047470;AGCD01047471;AGCD01047472;AGCD01047473;AGCD01047474;GBDF01176835;XM_005397522 XP_005397579 MODEL 8957251 protein-coding LOC102010114 vomeronasal type-1 receptor 4-like NW_004955603 478161 479087 + 102010114 AGCD01076848;XM_005414845 XP_005414902 MODEL 8886265 protein-coding Cstb cystatin B ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amyloid fibril formation (ortholog); negative regulation of proteolysis (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); Experimental Seizures (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955407 41475533 41478943 + 102004782 AGCD01007869;GBCE01002074;GBDK01013945;XM_005375884 XP_005375941 MODEL 9054941 pseudo LOC102007487 uncharacterized LOC102007487 NW_004955402 44529952 44533463 + 102007487 AGCD01001118 MODEL 8935304 protein-coding Mln motilin ENCODES a protein that exhibits motilin receptor binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); drug allergy (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955437 2188719 2193102 - 102012239 AGCD01034262;GBCE01123765;XM_005415242 XP_005415299 MODEL 9032962 protein-coding LOC102007872 olfactory receptor 2B6-like NW_004955465 13408100 13409973 - 102007872 AGCD01050608;XM_005398953 XP_005399010 MODEL 10388040 ncrna LOC106147145 uncharacterized LOC106147145 NW_004955523 229481 253714 - 106147145 AGCD01068438;AGCD01068439;AGCD01068440;GBBH01112506;XR_001231913;XR_001231914 MODEL 8942609 ncrna LOC102012071 uncharacterized LOC102012071 NW_004955463 1330958 1377220 - 102012071 AGCD01049509;AGCD01049510;AGCD01049511;AGCD01049512;GBDF01208723;XR_263140 MODEL 10165616 pseudo LOC106150086 histone H3.3C-like NW_004955464 12304578 12306426 + 106150086 AGCD01050190 MODEL 9035162 protein-coding Wdr74 WD repeat domain 74 INVOLVED IN blastocyst formation (ortholog); ribosomal large subunit biogenesis (ortholog); RNA metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955599 408076 413770 + 102005655 AGCD01076646;GBCE01053828;XM_005414759;XM_005414760 XP_005414816;XP_005414817 MODEL 9026085 protein-coding Mybph myosin binding protein H ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); hypertension (ortholog) NW_004955406 39174864 39191969 - 102008694 AGCD01006621;GBCB01089865;XM_005375253;XM_005375254;XM_005375255;XM_013522522;XM_013522534;XR_001236938;XR_001236939;XR_001236943;XR_001236947 XP_005375310;XP_005375311;XP_005375312;XP_013377976;XP_013377988 MODEL 9038035 protein-coding CUNH1orf141 chromosome unknown C1orf141 homolog ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955423 23893703 23936230 + 102005272 AGCD01024023;AGCD01024024;AGCD01024025;GBDF01049937;XM_013514486;XM_013514487;XM_013514488;XM_013514489;XM_013514490;XM_013514491;XM_013514492;XM_013514493;XM_013514494 XP_013369940;XP_013369941;XP_013369942;XP_013369943;XP_013369944;XP_013369945;XP_013369946;XP_013369947;XP_013369948 MODEL 8741404 protein-coding LOC102004966 ubiquitin-conjugating enzyme E2 variant 2 NW_004955434 3903987 3905023 - 102004966 AGCD01032148;XM_005388563 XP_005388620 MODEL 8833333 protein-coding Hes7 hes family bHLH transcription factor 7 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); spondylocostal dysostosis 4 (ortholog) NW_004955467 8837895 8841062 + 102024542 AGCD01051475;GBDJ01193638;XM_005399434 XP_005399491 MODEL 9012894 protein-coding Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN adult behavior (ortholog); adult walking behavior (ortholog); brain development (ortholog); ASSOCIATED WITH brain disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955446 13764907 13864824 - 102024733 AGCD01040256;AGCD01040257;AGCD01040258;AGCD01040259;GBDF01053717;XM_005392719 XP_005392776 MODEL 8907700 pseudo LOC102013607 TBC1 domain family member 1-like NW_004955481 9976291 9977512 - 102013607 AGCD01057130 MODEL 9030511 protein-coding Hook3 hook microtubule tethering protein 3 ENCODES a protein that exhibits dynactin binding (ortholog); dynein intermediate chain binding (ortholog); dynein light chain binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); early endosome to late endosome transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cis-Golgi network (ortholog) NW_004955457 13149013 13249524 + 102013055 AGCD01047039;AGCD01047040;GBDF01303775;GBDF01303780;XM_005397072;XM_005397073 XP_005397129;XP_005397130 MODEL 8918010 protein-coding Nup85 nucleoporin 85 INVOLVED IN chemotaxis (ortholog); lamellipodium assembly (ortholog); macrophage chemotaxis (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955553 2079418 2107894 + 102005423 AGCD01072918;AGCD01072919;AGCD01072920;AGCD01072921;AGCD01072922;AGCD01072923;GBDF01083519;GBDJ01190626;XM_013508631 XP_013364085 MODEL 9005109 ncrna LOC102024567 uncharacterized LOC102024567 NW_004955418 19565708 19587079 + 102024567 AGCD01019196;GBCQ01122903;XR_260573 MODEL 8923785 protein-coding Kif5b kinesin family member 5B ENCODES a protein that exhibits identical protein binding (ortholog); JUN kinase binding (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to type II interferon (ortholog); centrosome localization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mitochondria transport pathway; N-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Airway Obstruction (ortholog); anodontia (ortholog); FOUND IN axonal growth cone (ortholog); ciliary rootlet (ortholog); cytolytic granule membrane (ortholog) NW_004955429 23632246 23678797 - 102003570 AGCD01029075;AGCD01029076;AGCD01029077;AGCD01029078;GBBH01116411;GBDF01157819;XM_005387221 XP_005387278 MODEL 8731782 protein-coding Gpn2 GPN-loop GTPase 2 ASSOCIATED WITH cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog) NW_004955452 6227126 6234143 - 102024752 AGCD01044098;GBDF01225856;XM_005394884;XR_001236067 XP_005394941 MODEL 39132379 snrna U6 U6 spliceosomal RNA 9015054 protein-coding Irf2 interferon regulatory factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of type I interferon production (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell junction (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955403 24433334 24517618 + 102005874 AGCD01002273;AGCD01002274;GBDI01079451;XM_005373488;XM_005373489;XM_005373492;XM_005373493;XM_005373494 XP_005373545;XP_005373546;XP_005373549;XP_005373550;XP_005373551 MODEL 39131612 rrna 5S_rRNA 5S ribosomal RNA 8990685 ncrna LOC102006003 uncharacterized LOC102006003 NW_004955409 4395307 4403847 + 102006003 AGCD01009288;XR_259753 MODEL 8947233 protein-coding Flii FLII actin remodeling protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN sarcomere organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN brush border (ortholog); podosome (ortholog) NW_004955478 11061728 11075370 + 102021340 AGCD01056157;AGCD01056158;GBBH01061469;GBDI01005007;XM_013503179 XP_013358633 MODEL 9023850 protein-coding Fam98a family with sequence similarity 98 member A ENCODES a protein that exhibits protein methyltransferase activity (ortholog); INVOLVED IN lysosome localization (ortholog); positive regulation of ruffle assembly (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955441 1799453 1814096 - 102027117 AGCD01036757;AGCD01036758;GBDJ01045504;XM_005390857 XP_005390914 MODEL 8745939 protein-coding Galnt15 polypeptide N-acetylgalactosaminyltransferase 15 ASSOCIATED WITH basal cell carcinoma (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN transport vesicle (ortholog) NW_004955430 8463773 8510583 + 102026999 AGCD01029389;GBBH01213977;XM_005387449 XP_005387506 MODEL 8788630 protein-coding Pth1r parathyroid hormone 1 receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); parathyroid hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; parathyroid hormone signaling pathway; ASSOCIATED WITH brachydactyly type E1 (ortholog); chondrodysplasia Blomstrand type (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955420 25274269 25291984 - 102019506 AGCD01021348;GBDF01221234;XM_013513585 XP_013369039 MODEL 8780363 ncrna LOC102023562 uncharacterized LOC102023562 NW_004955410 27030216 27035415 - 102023562 AGCD01011208;GBCQ01121784;XR_259869 MODEL 8789620 protein-coding Tsen15 tRNA splicing endonuclease subunit 15 INVOLVED IN tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Developmental Disabilities (ortholog); FOUND IN tRNA-intron endonuclease complex (ortholog) NW_004955406 22787090 22806231 + 102029824 AGCD01006161;GBDK01323609;XM_005375050 XP_005375107 MODEL 8769525 protein-coding LOC102006357 cytochrome c oxidase subunit 6A2, mitochondrial ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 18 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex IV (ortholog) NW_004955493 8261297 8261961 - 102006357 AGCD01061282;GBCB01005316;XM_005405318 XP_005405375 MODEL 8927319 ncrna LOC102008960 uncharacterized LOC102008960 NW_004955500 4757497 4758238 - 102008960 AGCD01063810;XR_264224 MODEL 8922317 protein-coding Bmp10 bone morphogenetic protein 10 ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adult heart development (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH Fibrosis (ortholog); Left Ventricular Hypertrophy (ortholog); systolic heart failure (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955424 16124526 16130723 + 102018743 AGCD01024738;XM_005385656 XP_005385713 MODEL 39134090 misc_rna 7SK 7SK RNA 8932881 protein-coding Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN negative regulation of actin filament depolymerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) NW_004955441 10818982 10921224 + 102025179 AGCD01037094;AGCD01037095;GBDF01083557;XM_005390924;XM_005390925;XM_005390927;XM_005390928;XM_005390929;XM_005390930;XM_005390931;XM_005390932;XM_005390933;XM_013517541;XR_262069 XP_005390981;XP_005390982;XP_005390984;XP_005390985;XP_005390986;XP_005390987;XP_005390988;XP_005390989;XP_005390990;XP_013372995 MODEL 9012095 protein-coding LOC102022830 melanoma-associated antigen 10-like NW_004955498 4162615 4163379 - 102022830 AGCD01062973;XM_005406482 XP_005406539 MODEL 9031176 protein-coding LOC102010909 zinc finger protein 621 NW_004955420 29420972 29427337 - 102010909 AGCD01021500;GBDF01074480;XM_005383573;XM_005383574;XM_013513402;XM_013513403;XM_013513404;XM_013513405;XM_013513406;XM_013513407 XP_005383630;XP_005383631;XP_013368856;XP_013368857;XP_013368858;XP_013368859;XP_013368860;XP_013368861 MODEL 8912778 pseudo LOC102010116 oxysterol-binding protein-related protein 8-like NW_004955648 80516 86972 - 102010116 AGCD01077770 MODEL 8707725 pseudo LOC102005318 BRISC complex subunit Abro1 pseudogene NW_004955446 7660056 7661294 - 102005318 AGCD01040126 MODEL 9058739 protein-coding LOC102018147 ectonucleoside triphosphate diphosphohydrolase 6-like NW_004955847 889 15804 - 102018147 AGCD01078483;GBCE01185994;GBCE01186006;XM_005415131;XM_005415132;XM_005415133;XM_005415134;XM_013510199 XP_005415188;XP_005415189;XP_005415190;XP_005415191;XP_013365653 MODEL 8739654 protein-coding Naif1 nuclear apoptosis inducing factor 1 INVOLVED IN negative regulation of cell growth (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955419 656311 661928 + 102019503 AGCD01019601;GBDJ01044165;XM_005382388 XP_005382445 MODEL 8835804 protein-coding Gmcl1 germ cell-less 1, spermatogenesis associated ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nuclear envelope (ortholog); nuclear matrix (ortholog) NW_004955424 15265052 15318445 - 102024818 AGCD01024701;AGCD01024702;AGCD01024703;AGCD01024704;AGCD01024705;GBBH01188155;XM_013514713 XP_013370167 MODEL 8830130 protein-coding Ndufs5 NADH:ubiquinone oxidoreductase subunit S5 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955452 16634537 16641344 + 102021835 AGCD01044521;GBDF01303828;XM_005395239;XM_005395240;XM_005395241;XM_005395242 XP_005395296;XP_005395297;XP_005395298;XP_005395299 MODEL 9005493 protein-coding Cstf1 cleavage stimulation factor subunit 1 INVOLVED IN regulation of mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mRNA cleavage stimulating factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 2816986 2830971 - 102010207 AGCD01039368;AGCD01039369;GBDF01005298;XM_005392270;XM_005392271;XM_005392272;XM_005392273;XM_005392274;XM_013518332 XP_005392327;XP_005392328;XP_005392329;XP_005392330;XP_005392331;XP_013373786 MODEL 8984655 pseudo LOC102012489 B-cell CLL/lymphoma 7 protein family member C pseudogene NW_004955402 2619020 2627815 + 102012489 AGCD01000086 MODEL 10306315 ncrna LOC106149295 uncharacterized LOC106149295 NW_004955442 3395186 3400246 - 106149295 AGCD01037506;GBDF01164953;XR_001235366 MODEL 10282826 pseudo LOC106150087 small nuclear ribonucleoprotein E pseudogene NW_004955464 12331106 12331643 - 106150087 AGCD01050190 MODEL 8924950 ncrna LOC102012073 uncharacterized LOC102012073 NW_004955464 5894847 5895631 - 102012073 AGCD01050015;GBDF01046163;XR_001236693;XR_263202;XR_263203 MODEL 39134389 misc_rna 7SK 7SK RNA 39132501 rrna 5S_rRNA 5S ribosomal RNA 9010891 protein-coding Wdr75 WD repeat domain 75 INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955403 9352615 9383206 - 102008367 AGCD01001905;GBDJ01219698;XM_005373322 XP_005373379 MODEL 8953266 protein-coding Snx25 sorting nexin 25 ENCODES a protein that exhibits type I transforming growth factor beta receptor binding (ortholog); INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); receptor catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome (ortholog) NW_004955403 23678301 23787256 - 102028603 AGCD01002250;AGCD01002251;AGCD01002252;AGCD01002253;AGCD01002254;GBDK01250049;XM_005373470;XM_013512963;XM_013512965 XP_005373527;XP_013368417;XP_013368419 MODEL 8811858 ncrna LOC102003197 uncharacterized LOC102003197 NW_004955404 43067814 43068635 - 102003197 AGCD01004373;GBDF01288559;XR_259335 MODEL 8724293 protein-coding Sfn stratifin ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein binding (ortholog); phosphoserine residue binding (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); establishment of skin barrier (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH endometrial carcinoma (ortholog); Esophageal Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955452 6217519 6218481 + 102024419 AGCD01044097;GBDJ01006661;XM_005394883 XP_005394940 MODEL 9064073 pseudo LOC102023193 phosducin-like protein 3 pseudogene NW_004955534 780697 781415 - 102023193 AGCD01070470 MODEL 8902760 pseudo LOC102003569 40S ribosomal protein S20 pseudogene NW_004955429 19247140 19249410 + 102003569 AGCD01028938 MODEL 8841639 pseudo LOC102021503 synaptobrevin homolog YKT6 pseudogene NW_004955402 16757606 16758112 - 102021503 AGCD01000488 MODEL 9011345 protein-coding Mlnr motilin receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); hormone binding (ortholog); ASSOCIATED WITH lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955431 2711418 2719062 + 102020365 AGCD01029938;GBBH01212207;XM_005387575;XR_261442 XP_005387632 MODEL 8863892 pseudo LOC102007875 AP-3 complex subunit sigma-1 pseudogene NW_004955412 13389131 13390789 - 102007875 AGCD01012835 MODEL 8709626 protein-coding Nup88 nucleoporin 88 PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear envelope (ortholog); nuclear pore (ortholog) NW_004955467 10749910 10780423 - 102028070 AGCD01051583;GBDI01220761;XM_005399646 XP_005399703 MODEL 39132381 snrna U6 U6 spliceosomal RNA 8793024 protein-coding Defb116 defensin beta 116 NW_004955422 29569787 29613939 + 102006679 AGCD01023402;AGCD01023403;XM_005384993 XP_005385050 MODEL 10328039 ncrna LOC106150088 uncharacterized LOC106150088 NW_004955464 12757850 12758796 + 106150088 AGCD01050223;GBBH01181151;XR_001236690 MODEL 8725810 protein-coding LOC102025288 A-kinase anchor protein 5-like NW_004955543 2222873 2226189 + 102025288 AGCD01071648;AGCD01071649;XM_013508141 XP_013363595 MODEL 8928136 protein-coding Bbln bublin coiled coil protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); bone development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); cell junction (ortholog); intermediate filament (ortholog) NW_004955570 709009 712573 + 102021188 AGCD01074759;AGCD01074760;GBDF01193225;XM_005413526 XP_005413583 MODEL 8924430 protein-coding LOC102004967 vomeronasal type-2 receptor 116-like NW_004955524 2220139 2229192 + 102004967 AGCD01068802;XM_013507194 XP_013362648 MODEL 8762028 protein-coding LOC102007488 vomeronasal type-1 receptor 2-like NW_004955603 278326 279225 + 102007488 AGCD01076825;XM_005414837 XP_005414894 MODEL 9046561 ncrna LOC102006358 uncharacterized LOC102006358 NW_004955494 958163 966632 + 102006358 AGCD01061389;GBDI01027847;XR_264101 MODEL 8821254 protein-coding Hesx1 HESX homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Acidoses (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN nucleus (ortholog); protein-DNA complex (ortholog) NW_004955430 6955575 6956991 - 102013639 AGCD01029328;XM_005387406 XP_005387463 MODEL 8819958 protein-coding Hopx HOP homeobox ENCODES a protein that exhibits histone deacetylase regulator activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); heart development (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955447 14417014 14417797 + 102025190 AGCD01041004;GBDI01121374;GBDK01014444;XM_013518542 XP_013373996 MODEL 39134091 misc_rna 7SK 7SK RNA 8859908 ncrna LOC102003575 uncharacterized LOC102003575 NW_004955433 12281187 12287342 + 102003575 AGCD01031661;XR_001234717;XR_261586 MODEL 10308933 protein-coding LOC106147146 translation initiation factor IF-2-like NW_004955523 680842 682370 + 106147146 AGCD01068475;GBDF01246252;XM_013507117 XP_013362571 MODEL 8827226 protein-coding Asprv1 aspartic peptidase retroviral like 1 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); skin development (ortholog); ASSOCIATED WITH genetic disease (ortholog); ichthyosis (ortholog); Lamellar Ichthyosis, Autosomal Dominant Form (ortholog) NW_004955424 15190746 15193270 + 102012003 AGCD01024696;GBDI01226370;XM_005385633 XP_005385690 MODEL 8885898 protein-coding Dapk2 death associated protein kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN anoikis (ortholog); intracellular signal transduction (ortholog); neutrophil migration (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955450 11348566 11443908 + 102021824 AGCD01042659;AGCD01042660;AGCD01042661;GBCE01115793;XM_013519004 XP_013374458 MODEL 39131613 rrna 5S_rRNA 5S ribosomal RNA 8837098 protein-coding Gpn3 GPN-loop GTPase 3 INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955482 7367000 7383951 - 102022921 AGCD01057460;AGCD01057461;AGCD01057462;AGCD01057463;AGCD01057464;GBDK01195941;XM_005403151 XP_005403208 MODEL 8735666 ncrna LOC102006004 uncharacterized LOC102006004 NW_004955461 3891790 3962423 - 102006004 AGCD01048855;AGCD01048856;AGCD01048857;GBDK01220667;XR_263078 MODEL 8845435 protein-coding Gmds GDP-mannose 4,6-dehydratase ENCODES a protein that exhibits GDP-mannose 4,6-dehydratase activity (ortholog); identical protein binding (ortholog); NADP+ binding (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955465 11133513 11562562 + 102028514 AGCD01050521;AGCD01050522;AGCD01050523;AGCD01050524;AGCD01050525;AGCD01050526;GBBH01033606;XM_013521779 XP_013377233 MODEL 8805981 protein-coding Cstf2 cleavage stimulation factor subunit 2 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); mRNA 3'-end processing (ortholog); regulation of mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cleavage body (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); mRNA cleavage stimulating factor complex (ortholog) NW_004955503 6949901 6971281 + 102022623 AGCD01064776;GBDI01166416;XM_005406940;XM_005406941;XM_005406942 XP_005406997;XP_005406998;XP_005406999 MODEL 8968138 protein-coding Fam98b family with sequence similarity 98 member B ENCODES a protein that exhibits identical protein binding (ortholog); protein methyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 5457232 5486744 + 102008845 AGCD01016912;AGCD01016913;GBBH01025779;GBDF01193034;XM_013512677 XP_013368131 MODEL 8720440 protein-coding LOC102012491 kinesin-like protein KIF13B NW_004955802 3103 18233 - 102012491 AGCD01078376;GBDK01191507;GBDK01191509;XM_005415115 XP_005415172 MODEL 8767754 protein-coding Galnt16 polypeptide N-acetylgalactosaminyltransferase 16 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetylgalactosamine (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cholangiocarcinoma (ortholog); high grade glioma (ortholog) NW_004955466 1016580 1044077 - 102015391 AGCD01050686;GBCQ01151624;GBDJ01179388;XM_013522005 XP_013377459 MODEL 8992114 protein-coding Mybphl myosin binding protein H like INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); cardiomyopathy (ortholog); Hydrops Fetalis (ortholog); FOUND IN myofilament (ortholog) NW_004955435 12705467 12725320 - 102027670 AGCD01033162;AGCD01033163;GBDK01220697;XM_005388857;XM_005388860;XM_005388861;XR_001234861;XR_261682 XP_005388914;XP_005388917;XP_005388918 MODEL 8933771 protein-coding Flna filamin A ENCODES a protein that exhibits actin filament binding (ortholog); DNA-binding transcription factor binding (ortholog); Fc-gamma receptor I complex binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; integrin mediated signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actin filament bundle (ortholog) NW_004955580 874233 895172 + 102028037 AGCD01075628;GBDI01017513;GBDJ01003927;XM_013509692 XP_013365146 MODEL 9015813 protein-coding Pth2 parathyroid hormone 2 NW_004955559 1409966 1414881 + 102017514 AGCD01073644;GBDF01104303;XM_005412886;XM_013509049 XP_005412943;XP_013364503 MODEL 39134390 misc_rna 7SK 7SK RNA 8944025 ncrna LOC102012074 uncharacterized LOC102012074 NW_004955411 18978377 19015927 - 102012074 AGCD01012029;AGCD01012030;GBDF01115149;XR_259938 MODEL 9000811 ncrna LOC102008961 uncharacterized LOC102008961 NW_004955500 7699030 7703323 + 102008961 AGCD01063941;GBDF01005578;XR_001231468 MODEL 9062592 protein-coding LOC102023569 caspase-1-like NW_004955412 7816895 7828651 - 102023569 AGCD01012705;GBBH01026203;XM_005378005;XM_013511164;XM_013511165 XP_005378062;XP_013366618;XP_013366619 MODEL 8806653 ncrna LOC102013608 uncharacterized LOC102013608 NW_004955418 16719050 16722426 + 102013608 AGCD01019128;GBDI01161353;XR_001233486 MODEL 9037542 protein-coding LOC102010123 uncharacterized LOC102010123 NW_004955406 1259242 1295310 - 102010123 AGCD01005629;AGCD01005630;GBCQ01057585;XM_013503029 XP_013358483 MODEL 9048878 protein-coding Sfpq splicing factor proline and glutamine rich ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); alternative mRNA splicing, via spliceosome (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955452 13267968 13283823 - 102022877 AGCD01044397;AGCD01044398;GBBH01000997;GBCQ01037138;XM_005395311 XP_005395368 MODEL 8996930 protein-coding Plekhh3 pleckstrin homology, MyTH4 and FERM domain containing H3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955451 16523822 16531563 - 102028607 AGCD01043687;AGCD01043688;GBBH01062427;GBCB01003667;XM_013519145 XP_013374599 MODEL 8790732 pseudo LOC102018148 fructose-bisphosphate aldolase A pseudogene NW_004955403 51024231 51025067 - 102018148 AGCD01002985 MODEL 8815923 protein-coding Kif5c kinesin family member 5C ENCODES a protein that exhibits apolipoprotein receptor binding (ortholog); ATP hydrolysis activity (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); anterograde dendritic transport of messenger ribonucleoprotein complex (ortholog); intracellular mRNA localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease 3 (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN axonal growth cone (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) NW_004955440 14754931 14854090 + 102017707 AGCD01036479;AGCD01036480;GBDF01250404;XM_013517505 XP_013372959 MODEL 8891771 protein-coding Irf2bp1 interferon regulatory factor 2 binding protein 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); protein polyubiquitination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955574 309506 311759 - 102023208 AGCD01075098;GBCE01097248;XM_005413820 XP_005413877 MODEL 8949909 pseudo LOC102006363 eukaryotic translation initiation factor 1 pseudogene NW_004955423 9833774 9834101 - 102006363 AGCD01023668 MODEL 9055917 protein-coding LOC102024572 60S ribosomal protein L39-like NW_004955485 6403559 6408184 + 102024572 AGCD01058619;GBCE01062521;GBDK01223219;XM_013504070 XP_013359524 MODEL 8903326 protein-coding LOC102005320 UDP-glucuronosyltransferase 2B17-like NW_004955447 3893198 3953572 + 102005320 AGCD01040684;AGCD01040685;AGCD01040686;AGCD01040687;AGCD01040688;AGCD01040689;AGCD01040690;GBDJ01074833;XM_005392811;XM_013518530 XP_005392868;XP_013373984 MODEL 8810425 protein-coding Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 INVOLVED IN cellular senescence (ortholog); circulatory system development (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955504 893112 903282 + 102009082 AGCD01064831;GBCQ01003517;XM_005407059 XP_005407116 MODEL 8822956 protein-coding Naip NLR family apoptosis inhibitory protein ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); defense response to bacterium (ortholog); detection of bacterium (ortholog); ASSOCIATED WITH brain glioma (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN IPAF inflammasome complex (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) NW_004955575 249659 283378 + 102024736 AGCD01075210;GBDI01324464;XM_005413916;XM_013509579;XM_013509580;XM_013509581;XM_013509582;XM_013509583;XM_013509584;XR_265067 XP_005413973;XP_013365033;XP_013365034;XP_013365035;XP_013365036;XP_013365037;XP_013365038 MODEL 9018613 protein-coding Mlph melanophilin ENCODES a protein that exhibits actin binding (ortholog); microtubule plus-end binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN melanocyte differentiation (ortholog); melanosome localization (ortholog); pigmentation (ortholog); ASSOCIATED WITH alopecia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); dendrite (ortholog) NW_004955542 2769709 2807768 - 102008571 AGCD01071537;AGCD01071538;GBBH01185878;XM_005411228;XM_005411229;XM_005411231;XM_005411232 XP_005411285;XP_005411286;XP_005411288;XP_005411289 MODEL 39132502 rrna 5S_rRNA 5S ribosomal RNA 8728036 pseudo LOC102003198 methylmalonic aciduria and homocystinuria type D protein, mitochondrial pseudogene NW_004955404 48607830 48609942 - 102003198 AGCD01004506 MODEL 8708424 protein-coding Wdr76 WD repeat domain 76 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN heterochromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955416 10280112 10337963 + 102015196 AGCD01017129;AGCD01017130;AGCD01017131;AGCD01017132;AGCD01017133;AGCD01017134;AGCD01017135;GBDF01163138;XM_005381415;XM_013512615;XM_013512616;XM_013512617 XP_005381472;XP_013368069;XP_013368070;XP_013368071 MODEL 8837964 protein-coding Cstf2t cleavage stimulation factor subunit 2 tau variant ENCODES a protein that exhibits RNA binding (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway NW_004955425 6830775 6834799 - 102004730 AGCD01025375;GBDJ01389913;XM_005385903 XP_005385960 MODEL 8967716 ncrna LOC102022833 uncharacterized LOC102022833 NW_004955426 23883090 23887811 + 102022833 AGCD01026659;GBDF01127000;XR_261218 MODEL 8958840 ncrna LOC102023194 uncharacterized LOC102023194 NW_004955538 2857005 2863163 + 102023194 AGCD01071143;GBDF01016111;XR_264805 MODEL 8910465 protein-coding LOC102010912 claudin-34-like NW_004955493 6423748 6424605 - 102010912 AGCD01061103;GBDF01011330;GBDK01381044;XM_005405150 XP_005405207 MODEL 8982786 protein-coding Hexa hexosaminidase subunit alpha ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); dermatan sulfate proteoglycan catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH blindness (ortholog); brain disease (ortholog); cerebral palsy (ortholog); FOUND IN azurophil granule (ortholog); beta-N-acetylhexosaminidase complex (ortholog); extracellular region (ortholog) NW_004955450 4790342 4806862 + 102027925 AGCD01042477;GBDF01001103;XM_005393604 XP_005393661 MODEL 10184990 ncrna LOC106149296 uncharacterized LOC106149296 NW_004955442 3478744 3492015 - 106149296 AGCD01037507;GBCB01130707;XR_001235367 MODEL 9060255 protein-coding Nup93 nucleoporin 93 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN nuclear envelope organization (ortholog); nuclear pore complex assembly (ortholog); positive regulation of SMAD protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955433 14408079 14533292 + 102018522 AGCD01031721;AGCD01031722;GBDF01083582;XM_005388358 XP_005388415 MODEL 9038514 protein-coding Tsen2 tRNA splicing endonuclease subunit 2 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); tRNA-intron endonuclease complex (ortholog) NW_004955429 14970105 14997459 + 102018956 AGCD01028787;AGCD01028788;GBDK01001142;XM_005387020;XM_005387021;XM_013515519;XR_001234537;XR_261333 XP_005387077;XP_005387078;XP_013370973 MODEL 8783948 protein-coding Irf2bp2 interferon regulatory factor 2 binding protein 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN immature B cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); anxiety disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955492 4889878 4895508 - 102024244 AGCD01060734;AGCD01060735;GBBH01002287;GBCQ01073372;XM_005405019 XP_005405076 MODEL 8947551 protein-coding Dapk3 death associated protein kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin filament (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) NW_004955495 4809475 4822210 + 102015644 AGCD01061951;AGCD01061952;GBDF01046832;XM_005405820;XM_005405821;XM_005405822 XP_005405877;XP_005405878;XP_005405879 MODEL 8982458 pseudo LOC102012495 quinone oxidoreductase pseudogene NW_004955405 19872 21878 + 102012495 AGCD01004551 MODEL 8708121 pseudo LOC102025302 zinc finger protein 791 pseudogene NW_004955448 14214649 14216042 - 102025302 AGCD01041628 MODEL 8735282 protein-coding LOC102021507 zinc finger protein 883-like NW_004955624 87138 106468 - 102021507 AGCD01077434;AGCD01077435;AGCD01077436;XM_013510159 XP_013365613 MODEL 8837445 protein-coding LOC102007489 melanoma antigen preferentially expressed in tumors-like NW_004955608 370665 408600 - 102007489 AGCD01077038;AGCD01077039;AGCD01077040;XM_013510119 XP_013365573 MODEL 8818400 protein-coding CUNH1orf146 chromosome unknown C1orf146 homolog INVOLVED IN reciprocal meiotic recombination (ortholog); synaptonemal complex assembly (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); male infertility (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog) NW_004955423 2233445 2251205 - 102024694 AGCD01023470;GBDF01087039;XM_005385054 XP_005385111 MODEL 8833772 protein-coding LOC102012075 cytochrome P450 4A6-like NW_004955464 11526301 11537560 + 102012075 AGCD01050155;GBBH01214054;XM_005398648;XM_013521715 XP_005398705;XP_013377169 MODEL 39134092 misc_rna 7SK 7SK RNA 8807769 protein-coding LOC102023571 histone H2B type 2-E NW_004955413 865234 866657 + 102023571 AGCD01013492;XM_005378713 XP_005378770 MODEL 8767672 ncrna LOC102007879 uncharacterized LOC102007879 NW_004955413 30303353 30306413 - 102007879 AGCD01014605;GBDJ01200944;XR_260137 MODEL 8785986 pseudo LOC102022836 60S ribosomal protein L12 pseudogene NW_004955506 1962800 1963394 - 102022836 AGCD01065281;XR_264369 MODEL 8702358 protein-coding LOC102013611 olfactory receptor 14K1-like NW_004955418 30363345 30372168 + 102013611 AGCD01019514;AGCD01019515;XM_013512882 XP_013368336 MODEL 8968574 protein-coding LOC102003578 telomerase protein component 1-like NW_004955433 39594 81672 + 102003578 AGCD01031301;XM_013516101 XP_013371555 MODEL 10158200 protein-coding LOC106147147 vegetative cell wall protein gp1-like NW_004955523 686979 695179 + 106147147 AGCD01068475;AGCD01068476;GBDI01034822;XM_013507118 XP_013362572 MODEL 39131614 rrna 5S_rRNA 5S ribosomal RNA 8776952 pseudo LOC102006370 non-histone chromosomal protein HMG-17 pseudogene NW_004955427 21180390 21189979 - 102006370 AGCD01027432;AGCD01027433;XR_261284 MODEL 8991305 protein-coding Sfr1 SWI5 dependent homologous recombination repair protein 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); double-strand break repair via homologous recombination (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955485 6520747 6525359 - 102026429 AGCD01058621;GBDK01153601;XM_005403788;XM_005403789;XM_005403790;XM_005403791;XM_013504071;XM_013504072 XP_005403845;XP_005403846;XP_005403847;XP_005403848;XP_013359525;XP_013359526 MODEL 8881119 ncrna LOC102006005 uncharacterized LOC102006005 NW_004955462 6714177 6722753 - 102006005 AGCD01049288;GBDI01311251;XR_263100;XR_263101 MODEL 8925626 protein-coding Fam98c family with sequence similarity 98 member C ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955468 1021711 1025566 - 102014227 AGCD01051748;GBCE01154383;XM_005399847 XP_005399904 MODEL 8949829 protein-coding Kif6 kinesin family member 6 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); aortic dissection (ortholog); FOUND IN male germ cell nucleus (ortholog) NW_004955437 6353318 6597196 - 102029118 AGCD01034435;AGCD01034436;AGCD01034437;AGCD01034438;AGCD01034439;AGCD01034440;AGCD01034441;GBCE01165390;GBDI01357272;XM_013517003;XM_013517004;XM_013517005 XP_013372457;XP_013372458;XP_013372459 MODEL 8926496 protein-coding Defb118 defensin beta 118 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); membrane destabilizing activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 29554310 29560660 - 102024353 AGCD01023402;GBDF01056234;XM_005384922 XP_005384979 MODEL 9029559 protein-coding Gmeb1 glucocorticoid modulatory element binding protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); Hsp27 protein binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 7732095 7766810 + 102019235 AGCD01044191;AGCD01044192;AGCD01044193;AGCD01044194;GBDF01112717;XM_005394966;XM_005394967;XM_013519493;XM_013519494;XM_013519495 XP_005395023;XP_005395024;XP_013374947;XP_013374948;XP_013374949 MODEL 8870227 pseudo LOC102004969 putative protein FAM10A5 NW_004955435 22847866 22848965 + 102004969 AGCD01033522 MODEL 39132506 rrna 5S_rRNA 5S ribosomal RNA 8873020 protein-coding Bmp15 bone morphogenetic protein 15 INVOLVED IN ovarian cumulus expansion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955543 2304112 2345376 + 102018029 AGCD01071649;AGCD01071650;GBCE01042542;XM_005411357;XM_005411359;XM_005411360;XM_013508137;XM_013508138;XM_013508139;XM_013508140 XP_005411414;XP_005411416;XP_005411417;XP_013363591;XP_013363592;XP_013363593;XP_013363594 MODEL 8859430 protein-coding Galnt17 polypeptide N-acetylgalactosaminyltransferase 17 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); melanoma (ortholog) NW_004955456 9612734 10067396 - 102012735 AGCD01046513;AGCD01046514;AGCD01046515;AGCD01046516;AGCD01046517;GBDF01190901;XM_005396732 XP_005396789 MODEL 8772337 protein-coding Snx27 sorting nexin 27 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endosome (ortholog) NW_004955589 719892 799367 - 102019344 AGCD01076181;AGCD01076182;AGCD01076183;GBCQ01062668;XM_005414566;XM_005414567;XM_005414568 XP_005414623;XP_005414624;XP_005414625 MODEL 8724654 protein-coding LOC102008964 zinc finger CCHC-type and RNA-binding motif-containing protein 1 NW_004955426 18643581 18647670 - 102008964 AGCD01026526;AGCD01026527;GBCC01039405;XM_005386263 XP_005386320 MODEL 8717997 protein-coding Flnb filamin B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to type II interferon (ortholog); epithelial cell morphogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Absent Patella (ortholog); acute myeloid leukemia (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955430 7680394 7832124 + 102020827 AGCD01029367;AGCD01029368;AGCD01029369;AGCD01029370;AGCD01029371;GBDF01196019;XM_005387431;XM_005387432;XM_005387433;XM_013515640 XP_005387488;XP_005387489;XP_005387490;XP_013371094 MODEL 8782045 protein-coding Dapl1 death associated protein like 1 INVOLVED IN cell population proliferation (ortholog); gene expression (ortholog); negative regulation of CD8-positive, alpha-beta T cell activation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955449 14696413 14716520 - 102008480 AGCD01042172;GBDI01295898;XM_005393382 XP_005393439 MODEL 8971636 protein-coding Hormad1 HORMA domain containing 1 INVOLVED IN blastocyst development (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog); cytoplasm (ortholog) NW_004955413 130214 155381 + 102008836 AGCD01013438;AGCD01013439;AGCD01013440;GBDI01209109;XM_013511410;XM_013511411;XM_013511412;XR_001232970 XP_013366864;XP_013366865;XP_013366866 MODEL 8759747 pseudo LOC102010913 cationic trypsin-3-like NW_004955494 1211669 1216586 + 102010913 AGCD01061392 MODEL 8764499 protein-coding Aspscr1 ASPSCR1 tether for SLC2A4, UBX domain containing ENCODES a protein that exhibits methyltransferase regulator activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); intracellular protein transport (ortholog); peptidyl-lysine trimethylation (ortholog); ASSOCIATED WITH alveolar soft part sarcoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); intracellular protein-containing complex (ortholog) NW_004955506 1152790 1193826 - 102019825 AGCD01065247;GBDF01286847;XM_005407230;XM_005407231;XM_013506048 XP_005407287;XP_005407288;XP_013361502 MODEL 8856906 ncrna LOC102012076 uncharacterized LOC102012076 NW_004955412 13025707 13029033 - 102012076 AGCD01012827;GBDF01049222;XR_259987 MODEL 8739202 ncrna LOC102024573 uncharacterized LOC102024573 NW_004955486 1484368 1502960 + 102024573 AGCD01058956;GBBH01036206;XR_263940 MODEL 8744015 ncrna LOC102005321 uncharacterized LOC102005321 NW_004955575 1196092 1210167 + 102005321 AGCD01075234;GBDF01148249;XR_265071 MODEL 39132382 snrna U6 U6 spliceosomal RNA 8786652 pseudo LOC102022837 archaemetzincin-2 pseudogene NW_004955509 2246030 2248708 - 102022837 AGCD01065994 MODEL 8867015 protein-coding Nalcn sodium leak channel, non-selective ENCODES a protein that exhibits leak channel activity (ortholog); monoatomic cation channel activity (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); regulation of neuronal action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); aphasia (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) NW_004955404 9603567 9894688 + 102005437 AGCD01003372;GBDJ01103036;XM_005374037;XM_005374038;XM_005374039;XM_013515982 XP_005374094;XP_005374095;XP_005374096;XP_013371436 MODEL 8798004 protein-coding Pth2r parathyroid hormone 2 receptor ENCODES a protein that exhibits parathyroid hormone receptor activity (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955457 6584627 6674990 - 102025875 AGCD01046846;AGCD01046847;AGCD01046848;AGCD01046849;AGCD01046850;XM_005397112 XP_005397169 MODEL 9019225 ncrna LOC102003199 uncharacterized LOC102003199 NW_004955405 11281717 11443213 - 102003199 AGCD01004830;AGCD01004831;AGCD01004832;AGCD01004833;GBDJ01324103;XR_001235325;XR_001235327;XR_001235329 MODEL 8813050 protein-coding Bbof1 basal body orientation factor 1 INVOLVED IN cilium movement involved in cell motility (ortholog); flagellated sperm motility (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); polycystic ovary syndrome (ortholog); FOUND IN axoneme (ortholog); sperm flagellum (ortholog) NW_004955523 1363246 1405022 - 102020275 AGCD01068514;AGCD01068515;AGCD01068516;GBBH01032015;GBDF01084330;XM_005409398;XM_005409399;XM_005409400;XM_013507127 XP_005409455;XP_005409456;XP_005409457;XP_013362581 MODEL 39134391 misc_rna 7SK 7SK RNA 8779892 protein-coding Nup98 nucleoporin 98 and 96 precursor ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); mRNA binding (ortholog); nuclear localization sequence binding (ortholog); INVOLVED IN nuclear pore complex assembly (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); protein import into nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; mRNA nuclear export pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN kinetochore (ortholog); nuclear body (ortholog); nuclear envelope (ortholog) NW_004955414 19499577 19607075 - 102009039 AGCD01015321;AGCD01015322;AGCD01015323;AGCD01015324;AGCD01015325;GBDF01043497;XM_005380030;XM_005380031;XM_005380032;XM_005380033;XM_005380035;XM_013511898;XR_260183 XP_005380087;XP_005380088;XP_005380089;XP_005380090;XP_005380092;XP_013367352 MODEL 8725799 pseudo LOC102023197 septin-11 pseudogene NW_004955438 18236201 18238017 - 102023197 AGCD01035467;XM_005390398 MODEL 8848985 ncrna LOC102010124 uncharacterized LOC102010124 NW_004955406 8915324 8930814 + 102010124 AGCD01005810;GBDF01157210;XR_259486 MODEL 8848590 protein-coding Cstf3 cleavage stimulation factor subunit 3 INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); regulation of mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mRNA cleavage stimulating factor complex (ortholog); nucleoplasm (ortholog) NW_004955422 13049908 13124274 + 102025587 AGCD01022808;AGCD01022809;AGCD01022810;AGCD01022811;GBDF01087650;XM_005384169 XP_005384226 MODEL 9013697 protein-coding Wdr77 WD repeat domain 77 ENCODES a protein that exhibits methyl-CpG binding (ortholog); transcription coactivator activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of epithelial cell proliferation involved in prostate gland development (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lymphoma (ortholog); FOUND IN Cul4B-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955435 14929202 14940439 - 102027005 AGCD01033258;GBDF01183170;XM_005388949;XM_013516496 XP_005389006;XP_013371950 MODEL 8962766 protein-coding Plekhj1 pleckstrin homology domain containing J1 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955495 5904410 5907211 + 102017470 AGCD01062043;GBDF01082206;XM_005405916 XP_005405973 MODEL 8800798 ncrna LOC102018152 uncharacterized LOC102018152 NW_004955452 7664103 7667411 - 102018152 AGCD01044180;GBDI01004050;XR_262660 MODEL 8699729 protein-coding Gpnmb glycoprotein nmb ENCODES a protein that exhibits heparin binding (ortholog); integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN bone mineralization (ortholog); cell adhesion (ortholog); cell-cell signaling (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasmic vesicle (ortholog); early endosome membrane (ortholog); melanosome membrane (ortholog) NW_004955410 25554279 25583368 + 102013481 AGCD01011159;AGCD01011160;AGCD01011161;GBDK01002119;XM_005377395;XM_013510586 XP_005377452;XP_013366040 MODEL 8899518 pseudo LOC102023573 40S ribosomal protein SA pseudogene NW_004955468 5412271 5413102 - 102023573 AGCD01051969 MODEL 8918722 protein-coding CUNH1orf159 chromosome unknown C1orf159 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog) NW_004955486 9632940 9659682 + 102003555 AGCD01059194;AGCD01059195;GBCE01020372;XM_005404258;XM_005404260;XM_013504296;XM_013504297;XM_013504298;XM_013504300;XM_013504301;XM_013504302;XM_013504303;XR_001231143 XP_005404315;XP_005404317;XP_013359750;XP_013359751;XP_013359752;XP_013359754;XP_013359755;XP_013359756;XP_013359757 MODEL 9040077 protein-coding Mlst8 MTOR associated protein MLST8 ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); protein serine/threonine kinase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of actin filament polymerization (ortholog); positive regulation of peptidyl-tyrosine phosphorylation (ortholog); positive regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); lysosomal membrane (ortholog); TORC1 complex (ortholog) NW_004955442 15056363 15060300 - 102027794 AGCD01037856;GBDJ01278611;XM_005391442;XM_013517730;XM_013517731;XM_013517732 XP_005391499;XP_013373184;XP_013373185;XP_013373186 MODEL 8996263 ncrna LOC102003579 uncharacterized LOC102003579 NW_004955522 3869752 3871054 + 102003579 AGCD01068402;GBDI01286574;XR_264629 MODEL 9064279 protein-coding Irf2bpl interferon regulatory factor 2 binding protein like ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN development of animal secondary female sexual characteristics (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); ASSOCIATED WITH abducens nerve palsy (ortholog); Abnormal Reflexes (ortholog); Ataxia (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 946044 949315 - 102006610 AGCD01034965;GBDK01005190;XM_013517171 XP_013372625 MODEL 8912587 protein-coding LOC102006372 olfactory receptor 13G1-like NW_004955507 6393509 6394453 + 102006372 AGCD01065713;XM_005407722 XP_005407779 MODEL 8770691 protein-coding LOC102022839 olfactory receptor 5M8-like NW_004955511 1659389 1660327 - 102022839 AGCD01066377;XM_005408239 XP_005408296 MODEL 9006267 protein-coding Tsen34 tRNA splicing endonuclease subunit 34 INVOLVED IN tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Deglutition Disorders (ortholog); intellectual disability (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); tRNA-intron endonuclease complex (ortholog) NW_004955604 84072 89419 - 102011716 AGCD01076861;GBCE01054099;XM_005414852;XM_005414853;XM_005414854;XM_005414855;XM_013510089 XP_005414909;XP_005414910;XP_005414911;XP_005414912;XP_013365543 MODEL 39132159 rrna 5S_rRNA 5S ribosomal RNA 9014440 protein-coding LOC102021508 rhox homeobox family member 1-like NW_004955711 3374 5839 - 102021508 AGCD01078141;GBDF01163219;XM_013510180 XP_013365634 MODEL 39134093 misc_rna 7SK 7SK RNA 8790293 protein-coding Flnc filamin C ENCODES a protein that exhibits ankyrin binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN muscle cell development (ortholog); sarcomere organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sarcolemma (ortholog) NW_004955479 9633817 9661725 + 102003129 AGCD01056485;GBCB01006284;XM_005402388;XM_005402389;XM_005402390;XM_005402391 XP_005402445;XP_005402446;XP_005402447;XP_005402448 MODEL 8786114 protein-coding Hexb hexosaminidase subunit beta ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-N-acetylglucosaminidase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); INVOLVED IN astrocyte cell migration (ortholog); chondroitin sulfate proteoglycan catabolic process (ortholog); dermatan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); brain disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal vesicle (ortholog); azurophil granule (ortholog); beta-N-acetylhexosaminidase complex (ortholog) NW_004955425 25942341 25961312 - 102029766 AGCD01025939;GBBH01000461;GBCE01003948;XM_005386061 XP_005386118 MODEL 8915500 protein-coding Hormad2 HORMA domain containing 2 INVOLVED IN meiotic cell cycle (ortholog); meiotic sister chromatid cohesion (ortholog); ASSOCIATED WITH lung cancer (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 4309397 4462932 + 102015602 AGCD01045673;AGCD01045674;GBDF01004452;XM_005396240;XM_005396241;XM_005396242;XM_005396243;XM_013520487 XP_005396297;XP_005396298;XP_005396299;XP_005396300;XP_013375941 MODEL 8945148 ncrna LOC102013615 uncharacterized LOC102013615 NW_004955420 27425185 27435635 + 102013615 AGCD01021453;GBDF01251108;XR_260762 MODEL 8820253 protein-coding LOC102007886 putative olfactory receptor 52P1 NW_004955414 21670016 21670951 - 102007886 AGCD01015426;XM_005380499 XP_005380556 MODEL 8982275 pseudo LOC102005322 tubulin beta chain-like NW_004955402 252450 252882 - 102005322 AGCD01000015 MODEL 8954249 protein-coding Myc MYC proto-oncogene, bHLH transcription factor ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN amino acid transport (ortholog); B cell apoptotic process (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN ceramide signaling pathway; interleukin-2 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955461 2714022 2718872 + 102004362 AGCD01048840;GBCE01188679;XM_005397989 XP_005398046 MODEL 8955739 ncrna LOC102010918 uncharacterized LOC102010918 NW_004955496 4040916 4059796 - 102010918 AGCD01062307;AGCD01062308;GBDF01279073;XR_264175 MODEL 8824205 protein-coding Ass1 argininosuccinate synthase 1 ENCODES a protein that exhibits amino acid binding (ortholog); argininosuccinate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acute-phase response (ortholog); cellular response to amine stimulus (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); FOUND IN cell body fiber (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955513 443372 485190 + 102015877 AGCD01066826;GBCQ01008334;XM_005408343 XP_005408400 MODEL 8920872 ncrna LOC102012499 uncharacterized LOC102012499 NW_004955407 30651094 30671049 - 102012499 AGCD01007639;GBDJ01066236;XR_001231688;XR_259595 MODEL 8846729 pseudo LOC102025304 high mobility group protein B1 pseudogene NW_004955402 47542016 47542603 + 102025304 AGCD01001190 MODEL 9053850 protein-coding Kif7 kinesin family member 7 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); Agenesis of Corpus Callosum (ortholog); Arachnoid Cysts (ortholog); FOUND IN ciliary basal body (ortholog); ciliary tip (ortholog); cilium (ortholog) NW_004955416 15555959 15570925 + 102027179 AGCD01017335;GBCQ01123519;XM_005381548;XM_005381549;XM_013512554 XP_005381605;XP_005381606;XP_013368008 MODEL 8922785 ncrna LOC102008965 uncharacterized LOC102008965 NW_004955508 2550384 2643799 + 102008965 AGCD01065788;AGCD01065789;AGCD01065790;AGCD01065791;GBDF01249960;XR_264386 MODEL 9041553 ncrna LOC102003205 uncharacterized LOC102003205 NW_004955454 12305249 12309122 - 102003205 AGCD01045408;XR_262790 MODEL 8806465 protein-coding Galnt18 polypeptide N-acetylgalactosaminyltransferase 18 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetylgalactosamine (ortholog); ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955414 26812056 27146036 - 102010050 AGCD01015652;AGCD01015653;AGCD01015654;AGCD01015655;AGCD01015656;GBDI01294661;XM_005380289 XP_005380346 MODEL 8982303 pseudo LOC102007492 serine/threonine-protein kinase pim-2 pseudogene NW_004955769 5 841 - 102007492 AGCD01078313;XM_005415103 MODEL 8924655 protein-coding Bmp2 bone morphogenetic protein 2 ENCODES a protein that exhibits BMP receptor binding (ortholog); co-receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve development (ortholog); atrioventricular canal morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); atrial heart septal defect 1 (ortholog); bone disease (ortholog); FOUND IN BMP receptor complex (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955415 17048374 17058172 + 102018921 AGCD01016408;XM_005380857 XP_005380914 MODEL 8817241 protein-coding Ndufs7 NADH:ubiquinone oxidoreductase core subunit S7 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); protease binding (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH autistic disorder (ortholog); bipolar disorder (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955495 6540360 6548072 - 102006930 AGCD01062085;GBCB01003829;XM_005405978 XP_005406035 MODEL 8751103 protein-coding Bbox1 gamma-butyrobetaine hydroxylase 1 ENCODES a protein that exhibits gamma-butyrobetaine dioxygenase activity (ortholog); identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN carnitine biosynthetic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955476 6368842 6433797 + 102015106 AGCD01055330;AGCD01055331;GBBH01127279;XM_005401746;XM_005401747;XM_013502996 XP_005401803;XP_005401804;XP_013358450 MODEL 8811601 protein-coding Dapp1 dual adaptor of phosphotyrosine and 3-phosphoinositides 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955496 7813540 7855754 - 102022941 AGCD01062385;GBDJ01094345;XM_005406268;XM_013505383 XP_005406325;XP_013360837 MODEL 8881566 pseudo LOC102023198 speckle-type POZ protein pseudogene NW_004955546 94701 95906 + 102023198 AGCD01071949;XM_005411815 MODEL 10190715 protein-coding LOC106150089 uncharacterized LOC106150089 NW_004955464 4591900 4595081 - 106150089 AGCD01049992;GBDK01281559;XM_013521668;XM_013521669;XM_013521670;XR_001236691 XP_013377122;XP_013377123;XP_013377124 MODEL 8813619 protein-coding Wdr81 WD repeat domain 81 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN aggrephagy (ortholog); early endosome to late endosome transport (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); anxiety disorder (ortholog); aplastic anemia (ortholog); FOUND IN autophagosome membrane (ortholog); cytosol (ortholog); early endosome membrane (ortholog) NW_004955481 1450127 1462564 - 102016808 AGCD01056832;AGCD01056833;GBCE01008518;XM_005402608;XM_013503510;XM_013503511 XP_005402665;XP_013358964;XP_013358965 MODEL 10113423 ncrna LOC106149297 uncharacterized LOC106149297 NW_004955442 12914884 12920681 + 106149297 AGCD01037748;GBDK01017474;XR_001235368 MODEL 8723248 ncrna LOC102006006 uncharacterized LOC102006006 NW_004955462 11471552 11476166 - 102006006 AGCD01049391;GBDF01209715;XR_001236585 MODEL 8985855 protein-coding LOC102024577 olfactory receptor 13-like NW_004955491 398929 399861 + 102024577 AGCD01060332;XM_005404881 XP_005404938 MODEL 8951091 protein-coding LOC102023577 olfactory receptor 52E1-like NW_004955414 20762285 20763223 - 102023577 AGCD01015389;XM_005380066 XP_005380123 MODEL 39132383 snrna U6 U6 spliceosomal RNA 9046488 pseudo LOC102004970 dnaJ homolog subfamily C member 10-like NW_004955532 396089 401693 - 102004970 AGCD01070116;AGCD01070117 MODEL 8776745 protein-coding Defb119 defensin beta 119 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN innate immune response (ortholog); ASSOCIATED WITH female reproductive system disease (ortholog) NW_004955422 29544805 29550815 + 102024021 AGCD01023401;GBDF01006575;XM_005384921 XP_005384978 MODEL 9058682 protein-coding Fan1 FANCD2 and FANCI associated nuclease 1 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-flap endonuclease activity (ortholog); flap-structured DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic kidney disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 29722280 29757960 + 102016158 AGCD01017665;AGCD01017666;AGCD01017667;GBBH01165026;GBDF01193662;XM_005381663 XP_005381720 MODEL 9031253 protein-coding Sfrp1 secreted frizzled related protein 1 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); frizzled binding (ortholog); heparin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone trabecula formation (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); diastolic heart failure (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular matrix (ortholog) NW_004955536 1663721 1702678 + 102015981 AGCD01070766;GBCE01029787;XM_005410533 XP_005410590 MODEL 8742077 protein-coding Gmeb2 glucocorticoid modulatory element binding protein 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH melanoma (ortholog); neuronal ceroid lipofuscinosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955528 603817 638698 + 102008026 AGCD01069540;GBBH01193408;XM_005409955;XM_013507500;XM_013507501 XP_005410012;XP_013362954;XP_013362955 MODEL 8788001 protein-coding Pthlh parathyroid hormone like hormone ENCODES a protein that exhibits hormone activity (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); endochondral ossification (ortholog); endoderm development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH achondroplasia (ortholog); acute necrotizing pancreatitis (ortholog); alcoholic pancreatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955505 6834533 6846909 + 102018623 AGCD01065187;GBBH01206343;GBDK01026033;XM_005407152 XP_005407209 MODEL 39134392 misc_rna 7SK 7SK RNA 8960181 protein-coding Mlx MAX dimerization protein MLX ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nucleocytoplasmic transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955451 16460737 16464529 + 102021299 AGCD01043679;GBDK01093839;XM_013519147 XP_013374601 MODEL 8862647 protein-coding Snx29 sorting nexin 29 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955442 6082362 6607440 - 102023201 AGCD01037580;AGCD01037581;AGCD01037582;AGCD01037583;AGCD01037584;AGCD01037585;AGCD01037586;AGCD01037587;AGCD01037588;AGCD01037589;AGCD01037590;GBDF01272494;XM_005391150;XM_013517836 XP_005391207;XP_013373290 MODEL 8898363 protein-coding Nupr1 nuclear protein 1, transcriptional regulator ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); male gonad development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955493 6746380 6747763 - 102018195 AGCD01061136;GBDJ01018254;XM_005405174 XP_005405231 MODEL 9065919 ncrna LOC102010129 uncharacterized LOC102010129 NW_004955457 12742119 12748992 + 102010129 AGCD01047026;GBCB01083718;XR_262945 MODEL 39132163 rrna 5S_rRNA 5S ribosomal RNA 8840774 protein-coding LOC102012500 uncharacterized LOC102012500 NW_004955456 6824286 6831920 + 102012500 AGCD01046378;GBDF01048469;XM_013520512;XR_001236319;XR_001236320 XP_013375966 MODEL 10252589 protein-coding LOC106147148 uncharacterized LOC106147148 NW_004955523 2420415 2423013 + 106147148 AGCD01068579;AGCD01068580;GBDF01279201;XM_013507121 XP_013362575 MODEL 39131615 rrna 5S_rRNA 5S ribosomal RNA 39134094 misc_rna 7SK 7SK RNA 8905120 protein-coding Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits manganese ion binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN positive regulation of immunoglobulin production (ortholog); protein maturation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); Golgi stack (ortholog) NW_004955492 8104334 8245143 - 102014257 AGCD01060808;AGCD01060809;GBCE01054322;XM_005404995 XP_005405052 MODEL 8963310 protein-coding Dars1 aspartyl-tRNA synthetase 1 ENCODES a protein that exhibits aspartate-tRNA ligase activity (ortholog); INVOLVED IN aspartyl-tRNA aminoacylation (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955440 3268648 3345808 - 102010837 AGCD01036240;GBBH01117599;XM_013517491 XP_013372945 MODEL 8703642 protein-coding Hexd hexosaminidase D ENCODES a protein that exhibits beta-N-acetylhexosaminidase activity (ortholog); hexosaminidase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular vesicle (ortholog); nucleus (ortholog) NW_004955506 702828 719733 - 102008874 AGCD01065234;GBDJ01234157;XM_005407196;XM_013506081;XM_013506082;XM_013506083;XM_013506084 XP_005407253;XP_013361535;XP_013361536;XP_013361537;XP_013361538 MODEL 8755809 protein-coding Nalf1 NALCN channel auxiliary factor 1 INVOLVED IN regulation of neuronal action potential (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); diverticulitis (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) NW_004955404 3860933 4443068 + 102025864 AGCD01003286;AGCD01003287;AGCD01003288;AGCD01003289;AGCD01003290;AGCD01003291;AGCD01003292;GBDJ01027542;XM_005374016;XM_005374017 XP_005374073;XP_005374074 MODEL 8711121 protein-coding Aste1 asteroid structure-specific endonuclease 1 ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); single-stranded DNA endonuclease activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Lynch syndrome (ortholog); mismatch repair cancer syndrome (ortholog) NW_004955501 7373713 7383092 + 102011561 AGCD01064214;GBDF01225117;XM_013505735;XR_001231517;XR_001231518 XP_013361189 MODEL 8959113 ncrna LOC102003582 uncharacterized LOC102003582 NW_004955526 1543834 1552568 + 102003582 AGCD01069274;GBDF01182742;XR_264657 MODEL 8805685 protein-coding LOC102006374 olfactory receptor 5AL1-like NW_004955511 1550026 1550967 + 102006374 AGCD01066371;XM_005407965 XP_005408022 MODEL 8751362 ncrna LOC102022841 uncharacterized LOC102022841 NW_004955513 3130866 3138160 - 102022841 AGCD01066895;XR_001231741;XR_264467 MODEL 8978965 protein-coding Tsen54 tRNA splicing endonuclease subunit 54 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); amblyopia (ortholog); FOUND IN tRNA-intron endonuclease complex (ortholog) NW_004955553 2367476 2376704 + 102027464 AGCD01072935;GBDF01083927;XM_005412297;XM_013508627;XM_013508628 XP_005412354;XP_013364081;XP_013364082 MODEL 39134393 misc_rna 7SK 7SK RNA 8926611 protein-coding LOC102008966 olfactory receptor 1030-like NW_004955511 1700555 1701493 - 102008966 AGCD01066377;XM_005407972 XP_005408029 MODEL 8766946 pseudo LOC102012078 ETS translocation variant 5 pseudogene NW_004955412 6032104 6035073 + 102012078 AGCD01012664 MODEL 8890043 protein-coding LOC102021509 keratin-associated protein 3-3 NW_004955451 15419155 15419938 - 102021509 AGCD01043607;GBDJ01056995;XM_005394379 XP_005394436 MODEL 8823654 protein-coding Plekhm1 pleckstrin homology and RUN domain containing M1 INVOLVED IN autophagosome-lysosome fusion (ortholog); late endosome to lysosome transport (ortholog); lysosome localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Autosomal Dominant Osteopetrosis 3 (ortholog); autosomal recessive osteopetrosis 1 (ortholog); FOUND IN autolysosome (ortholog); autolysosome membrane (ortholog); endosome membrane (ortholog) NW_004955451 18043194 18079808 - 102027259 AGCD01043790;GBDI01179295;XM_005394577;XM_013519289;XM_013519290;XM_013519291;XM_013519292;XM_013519293;XM_013519294;XM_013519295;XM_013519296 XP_005394634;XP_013374743;XP_013374744;XP_013374745;XP_013374746;XP_013374747;XP_013374748;XP_013374749;XP_013374750 MODEL 8992323 protein-coding CUNH1orf167 chromosome unknown C1orf167 homolog ASSOCIATED WITH coronary artery disease (ortholog); stroke (ortholog) NW_004955486 2112698 2131296 - 102006464 AGCD01058988;GBDF01003491;XM_005403989;XM_013504259;XM_013504260 XP_005404046;XP_013359713;XP_013359714 MODEL 39132164 rrna 5S_rRNA 5S ribosomal RNA 8721742 protein-coding Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955422 17781374 17785395 - 102007780 AGCD01022932;GBDK01002250;XM_005384289;XM_013514041 XP_005384346;XP_013369495 MODEL 8824745 protein-coding LOC102013616 PRAME family member 12-like NW_004955486 324217 327218 + 102013616 AGCD01058836;XM_013504136 XP_013359590 MODEL 8912420 protein-coding Hoxa1 homeobox A1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN abducens nerve formation (ortholog); anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Athabaskan brainstem dysgenesis syndrome (ortholog); autistic disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955410 28788245 28790971 - 102030160 AGCD01011259;GBCQ01023296;XM_005377446;XM_005377447 XP_005377503;XP_005377504 MODEL 39131616 rrna 5S_rRNA 5S ribosomal RNA 10236556 ncrna LOC106147149 uncharacterized LOC106147149 NW_004955408 24614177 24622117 - 106147149 AGCD01008621;GBDF01211538;XR_001231920 MODEL 8955917 protein-coding Flot1 flotillin 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); caveola assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955583 717246 729924 - 102018347 AGCD01075855;AGCD01075856;AGCD01075857;GBDJ01001358;GBDK01004420;XM_005414316 XP_005414373 MODEL 8997933 protein-coding LOC102007889 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like NW_004955476 1983725 1985174 + 102007889 AGCD01055217;GBDF01044591;XM_005401726 XP_005401783 MODEL 8765959 protein-coding Mycbp MYC binding protein ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); spermatogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 16490066 16496989 - 102019463 AGCD01044513;GBDF01044159;XM_005395230 XP_005395287 MODEL 9065848 protein-coding Cstl1 cystatin like 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); INVOLVED IN signaling receptor ligand precursor processing (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955415 30438013 30441845 + 102005133 AGCD01016664;GBDF01084259;XM_005380970 XP_005381027 MODEL 9061569 protein-coding Kif9 kinesin family member 9 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); organelle disassembly (ortholog); regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axonemal microtubule (ortholog); microtubule (ortholog); podosome (ortholog) NW_004955420 24968757 25011642 + 102015017 AGCD01021339;AGCD01021340;AGCD01021341;GBDF01049531;XM_005383403;XM_005383404;XM_005383405;XM_005383407;XM_005383408;XM_013513486;XM_013513487;XM_013513488 XP_005383460;XP_005383461;XP_005383462;XP_005383464;XP_005383465;XP_013368940;XP_013368941;XP_013368942 MODEL 8726863 pseudo LOC102018153 protein phosphatase 1A pseudogene NW_004955405 7689040 7690265 - 102018153 AGCD01004721 MODEL 8929939 protein-coding Hey1 hes related family bHLH transcription factor with YRPW motif 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior axis specification (ortholog); aortic valve morphogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway; altered Notch signaling pathway involving promoters; Notch signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955444 1498444 1502099 + 102008781 AGCD01038727;AGCD01038728;GBDK01407482;XM_005392194 XP_005392251 MODEL 8990003 protein-coding Snx3 sorting nexin 3 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN hemoglobin biosynthetic process (ortholog); host-mediated suppression of symbiont invasion (ortholog); intralumenal vesicle formation (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955411 33339974 33344563 - 102011098 AGCD01012354;GBCE01000037;XM_005377844 XP_005377901 MODEL 8845463 protein-coding Nupr2 nuclear protein 2, transcriptional regulator INVOLVED IN cellular response to starvation (ortholog); DNA damage response (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955456 8268429 8269517 - 102004243 AGCD01046465;GBDI01222077;XM_005396705 XP_005396762 MODEL 8730163 pseudo LOC102010130 olfactory receptor 1361-like NW_004955408 1554851 1556907 + 102010130 AGCD01007965 MODEL 9041799 protein-coding LOC102012087 interferon-induced very large GTPase 1-like NW_004955414 22472329 22477687 - 102012087 AGCD01015457;XM_005380508 XP_005380565 MODEL 8943864 protein-coding Wdr82 WD repeat domain 82 ENCODES a protein that exhibits chromatin binding (ortholog); lncRNA binding (ortholog); INVOLVED IN gene expression (ortholog); lncRNA catabolic process (ortholog); negative regulation of DNA-templated transcription, elongation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955532 3860785 3880714 - 102027900 AGCD01070302;GBDK01090445;XM_005410348 XP_005410405 MODEL 9029306 ncrna LOC102004973 uncharacterized LOC102004973 NW_004955438 10817523 10828435 - 102004973 AGCD01035218;GBDF01251958;XR_261926 MODEL 8728334 ncrna LOC102010919 uncharacterized LOC102010919 NW_004955424 15047979 15112987 + 102010919 AGCD01024683;AGCD01024684;AGCD01024685;AGCD01024686;AGCD01024687;AGCD01024688;AGCD01024689;GBBH01137283;XR_001234214;XR_001234215;XR_001234216;XR_001234217;XR_001234218;XR_001234219;XR_001234220;XR_001234221;XR_001234222;XR_001234223 MODEL 8733915 pseudo LOC102025306 zinc finger and BTB domain-containing protein 44 pseudogene NW_004955600 457007 459128 + 102025306 AGCD01076723 MODEL 8954574 protein-coding Fanca FA complementation group A INVOLVED IN female gonad development (ortholog); male gonad development (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); bone marrow disease (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) NW_004955541 3272936 3320229 - 102016519 AGCD01071441;GBDJ01214635;XM_005411060;XM_005411062;XM_013507950;XM_013507951;XM_013507952;XM_013507953;XM_013507954;XR_001232134;XR_001232135 XP_005411117;XP_005411119;XP_013363404;XP_013363405;XP_013363406;XP_013363407;XP_013363408 MODEL 9033706 protein-coding Defb121 defensin beta 121 NW_004955422 29525435 29526857 + 102006362 AGCD01023401;GBDJ01258373;XM_005384992 XP_005385049 MODEL 9009336 protein-coding Gmfb glia maturation factor beta INVOLVED IN learning (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955409 8969398 8984008 + 102030607 AGCD01009426;GBDF01085214;XM_005376765 XP_005376822 MODEL 8868683 protein-coding Dars2 aspartyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits aspartate-tRNA ligase activity (ortholog); aspartate-tRNA(Asn) ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial asparaginyl-tRNA aminoacylation (ortholog); tRNA aminoacylation (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); asthma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955406 13964087 13991691 + 102008592 AGCD01005956;GBCE01165299;XM_005374874 XP_005374931 MODEL 8993464 protein-coding Gpr101 G protein-coupled receptor 101 ASSOCIATED WITH growth hormone secreting pituitary adenoma (ortholog); growth hormone secreting pituitary adenoma 2 (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955489 8125763 8127280 + 102009617 AGCD01060001;XM_005404577 XP_005404634 MODEL 8935190 pseudo LOC102007494 glycoprotein endo-alpha-1,2-mannosidase pseudogene NW_004955403 21715243 21717598 - 102007494 AGCD01002203;XM_005373891 MODEL 8958250 pseudo LOC102022843 60S ribosomal protein L17 pseudogene NW_004955432 3221423 3223412 + 102022843 AGCD01030640 MODEL 8946105 protein-coding Astl astacin like metalloendopeptidase ENCODES a protein that exhibits aspartic-type peptidase activity (ortholog); glutamic-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cell adhesion (ortholog); fertilization (ortholog); negative regulation of binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cortical granule (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955470 3719254 3732598 - 102025566 AGCD01052708;GBCQ01144366;XM_013522845 XP_013378299 MODEL 8700315 protein-coding Sfrp2 secreted frizzled related protein 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme activator activity (ortholog); fibronectin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); apoptotic process (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); inflammatory bowel disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955471 8103937 8112596 - 102006653 AGCD01053178;AGCD01053179;GBBH01060570;GBDJ01000856;XM_005400928 XP_005400985 MODEL 8958270 ncrna LOC102023199 uncharacterized LOC102023199 NW_004955441 15211964 15214246 + 102023199 AGCD01037244;GBDF01213433;XR_262084 MODEL 10161947 ncrna LOC106150090 uncharacterized LOC106150090 NW_004955464 4595196 4600399 - 106150090 AGCD01049992;GBCE01177987;XR_001236692 MODEL 9018562 protein-coding Bmp2k BMP2 inducible kinase ENCODES a protein that exhibits phosphatase regulator activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN regulation of bone mineralization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955433 3207512 3327688 + 102007147 AGCD01031417;AGCD01031418;AGCD01031419;AGCD01031420;GBDF01286250;XM_013516102 XP_013371556 MODEL 9055678 protein-coding Tsfm Ts translation elongation factor, mitochondrial INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); combined oxidative phosphorylation deficiency 3 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 5489551 5498572 + 102012162 AGCD01047494;AGCD01047495;GBDI01117542;XM_005397417;XM_005397418 XP_005397474;XP_005397475 MODEL 8872090 protein-coding LOC102008968 olfactory receptor-like protein OLF2 NW_004955511 826804 827742 + 102008968 AGCD01066344;XM_005408212 XP_005408269 MODEL 8802581 protein-coding Cstpp1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); regulation of protein complex stability (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog) NW_004955422 1005941 1179128 - 102029188 AGCD01022444;AGCD01022445;AGCD01022446;AGCD01022447;GBDJ01371432;XM_005384000;XM_005384001;XM_013513931;XM_013513932;XM_013513933;XM_013513934 XP_005384057;XP_005384058;XP_013369385;XP_013369386;XP_013369387;XP_013369388 MODEL 39134095 misc_rna 7SK 7SK RNA 39132384 snrna U6 U6 spliceosomal RNA 8948687 protein-coding Irf3 interferon regulatory factor 3 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955559 1223986 1228671 + 102010317 AGCD01073637;GBBH01002978;XM_005412858;XM_013508980;XM_013508981;XM_013508982 XP_005412915;XP_013364434;XP_013364435;XP_013364436 MODEL 8973552 pseudo LOC102024579 heterogeneous nuclear ribonucleoprotein H2-like NW_004955493 2976417 2978113 + 102024579 AGCD01060974 MODEL 8842706 protein-coding Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit ENCODES a protein that exhibits ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); dolichyl diphosphate biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); FOUND IN dehydrodolichyl diphosphate synthase complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955436 825387 850558 + 102023392 AGCD01033561;AGCD01033562;GBCE01026590;XM_005389289 XP_005389346 MODEL 8844673 protein-coding LOC102006008 cysteine-rich secretory protein 2 NW_004955411 8242364 8257545 + 102006008 AGCD01011720;GBDF01010088;XM_005377669;XM_005377670;XM_005377671;XM_013510701;XM_013510702 XP_005377726;XP_005377727;XP_005377728;XP_013366155;XP_013366156 MODEL 39132165 rrna 5S_rRNA 5S ribosomal RNA 8776302 protein-coding Plekhm2 pleckstrin homology and RUN domain containing M2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN Golgi organization (ortholog); lysosome localization (ortholog); natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955527 2438595 2453120 - 102010404 AGCD01069436;GBCE01096844;GBDJ01072717;XM_013507397 XP_013362851 MODEL 9009673 protein-coding Galnt3 polypeptide N-acetylgalactosaminyltransferase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); manganese ion binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell maturation (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH calcinosis (ortholog); cholangiocarcinoma (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955449 8365951 8406988 + 102011260 AGCD01042011;AGCD01042012;AGCD01042013;GBCE01104908;XM_005393291;XM_013518790 XP_005393348;XP_013374244 MODEL 8810339 pseudo LOC102003206 cysteine and histidine-rich domain-containing protein 1-like NW_004955407 13581947 13582930 - 102003206 AGCD01007151 MODEL 8742730 pseudo LOC102003583 zinc transporter ZIP2 pseudogene NW_004955436 12539750 12540990 + 102003583 AGCD01033843 MODEL 8724846 protein-coding Flot2 flotillin 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); negative regulation of amyloid precursor protein catabolic process (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); adherens junction (ortholog); apical plasma membrane (ortholog) NW_004955481 4276847 4298523 + 102018287 AGCD01056933;GBBH01061429;XM_005402703;XM_005402704;XM_005402705;XM_005402707;XM_013503420 XP_005402760;XP_005402761;XP_005402762;XP_005402764;XP_013358874 MODEL 8859125 protein-coding LOC102006375 olfactory receptor 5B3-like NW_004955511 3661944 3662882 - 102006375 AGCD01066472;XM_005408047 XP_005408104 MODEL 8804875 protein-coding Mlxip MLX interacting protein ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Coronary Disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial outer membrane (ortholog); nucleus (ortholog) NW_004955482 6410182 6456582 - 102008627 AGCD01057394;AGCD01057395;GBBH01033842;GBCB01006529;XM_005403102;XM_013503703;XR_001230988 XP_005403159;XP_013359157 MODEL 8918067 protein-coding Bbs1 Bardet-Biedl syndrome 1 ENCODES a protein that exhibits patched binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); brain morphogenesis (ortholog); cartilage development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); centrosome (ortholog) NW_004955422 18825756 18843820 - 102009193 AGCD01022962;AGCD01022963;AGCD01022964;GBDF01048179;XM_005384395 XP_005384452 MODEL 8986967 ncrna LOC102012502 uncharacterized LOC102012502 NW_004955456 10052149 10054952 + 102012502 AGCD01046517;GBDF01261841;XR_262892 MODEL 10119407 ncrna LOC106149298 uncharacterized LOC106149298 NW_004955442 7173141 7175860 + 106149298 AGCD01037620;GBBH01216532;XR_001235369;XR_001235370 MODEL 8863087 protein-coding Daw1 dynein assembly factor with WD repeats 1 INVOLVED IN cerebrospinal fluid circulation (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955453 6736998 6788214 - 102005887 AGCD01044729;AGCD01044730;AGCD01044731;GBDF01045707;XM_005395436;XM_005395438;XM_013519986 XP_005395493;XP_005395495;XP_013375440 MODEL 8799746 ncrna LOC102005323 uncharacterized LOC102005323 NW_004955402 4782171 4812521 - 102005323 AGCD01000126;AGCD01000127;GBDI01204334;XR_001236325;XR_259027 MODEL 8794986 pseudo LOC102022846 60S ribosomal protein L9 pseudogene NW_004955433 23253679 23259191 + 102022846 AGCD01031956 MODEL 9032656 ncrna LOC102023578 uncharacterized LOC102023578 NW_004955470 9804279 9808744 + 102023578 AGCD01052842;XR_263480;XR_263481 MODEL 8779862 protein-coding LOC102006376 olfactory receptor 5L1-like NW_004955511 671617 672567 + 102006376 AGCD01066337;XM_005408205 XP_005408262 MODEL 8940885 protein-coding Mycbp2 MYC binding protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN branchiomotor neuron axon guidance (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous system projection neuron axonogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 26 (ortholog); FOUND IN axon (ortholog); microtubule cytoskeleton (ortholog); nucleoplasm (ortholog) NW_004955404 29932125 30186236 + 102017943 AGCD01003994;AGCD01003995;AGCD01003996;AGCD01003997;AGCD01003998;AGCD01003999;AGCD01004000;GBCQ01173711;XM_005374160;XM_005374161;XM_005374162;XM_013516419;XM_013516422;XM_013516423;XM_013516426;XM_013516429;XM_013516432;XM_013516436;XM_013516441;XM_013516445;XM_013516461 XP_005374217;XP_005374218;XP_005374219;XP_013371873;XP_013371876;XP_013371877;XP_013371880;XP_013371883;XP_013371886;XP_013371890;XP_013371895;XP_013371899;XP_013371915 MODEL 8947327 protein-coding Hey2 hes related family bHLH transcription factor with YRPW motif 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); aortic valve morphogenesis (ortholog); arterial endothelial cell differentiation (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic valve disease (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription repressor complex (ortholog) NW_004955436 7060930 7070610 + 102028012 AGCD01033698;AGCD01033699;GBBH01207418;GBCE01045612;XM_013516704 XP_013372158 MODEL 8733887 protein-coding CUNH1orf174 chromosome unknown C1orf174 homolog ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); Neurodevelopmental Disorders (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955486 7821396 7834357 + 102020919 AGCD01059136;AGCD01059137;AGCD01059138;GBDF01208076;XM_005404125 XP_005404182 MODEL 8792407 protein-coding LOC102010135 potassium channel subfamily U member 1 NW_004955463 12558868 12692079 + 102010135 AGCD01049855;AGCD01049856;GBDF01257773;XM_005398473 XP_005398530 MODEL 10177660 protein-coding LOC106147150 RING finger protein 113A-like NW_004955523 1388264 1390123 - 106147150 AGCD01068514;GBBH01101574;XM_013507140 XP_013362594 MODEL 8734614 protein-coding Ptk2 protein tyrosine kinase 2 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); cell migration (ortholog); PARTICIPATES IN integrin mediated signaling pathway; long term potentiation; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); ciliary basal body (ortholog) NW_004955461 14337914 14622779 - 102025551 AGCD01049055;AGCD01049056;GBBH01185452;GBCB01040518;XM_005398062;XM_005398063;XM_013521315;XM_013521316;XM_013521317;XM_013521318;XM_013521319;XM_013521320;XM_013521321;XM_013521322;XM_013521323 XP_005398119;XP_005398120;XP_013376769;XP_013376770;XP_013376771;XP_013376772;XP_013376773;XP_013376774;XP_013376775;XP_013376776;XP_013376777 MODEL 8883745 ncrna LOC102007891 uncharacterized LOC102007891 NW_004955417 4393900 4397203 + 102007891 AGCD01017946;GBDF01263566;XR_260459 MODEL 9005788 protein-coding Tsg101 tumor susceptibility 101 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell differentiation (ortholog); endosome to lysosome transport (ortholog); exosomal secretion (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); breast carcinoma (ortholog); cervix carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955414 33154812 33193769 - 102023023 AGCD01015799;AGCD01015800;GBCE01077499;XM_005380422;XM_005380423 XP_005380479;XP_005380480 MODEL 8704578 protein-coding Fancb FA complementation group B INVOLVED IN bone marrow development (ortholog); cell differentiation (ortholog); cellular response to camptothecin (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955519 3337138 3364963 + 102020044 AGCD01067957;AGCD01067958;AGCD01067959;GBDF01033497;XM_013506977 XP_013362431 MODEL 9013323 ncrna LOC102010922 uncharacterized LOC102010922 NW_004955425 2114106 2208490 - 102010922 AGCD01025251;AGCD01025252;AGCD01025253;AGCD01025254;AGCD01025255;GBDF01075868;XR_001234279;XR_001234280;XR_001234281;XR_001234282;XR_001234283 MODEL 8748436 pseudo LOC102021510 60S ribosomal protein L36 pseudogene NW_004955403 57896896 57898033 + 102021510 AGCD01003167;XM_005373867 MODEL 8724206 protein-coding Defb123 defensin beta 123 NW_004955422 29494221 29496697 - 102023372 AGCD01023399;GBDF01049661;XM_005384919 XP_005384976 MODEL 39131617 rrna 5S_rRNA 5S ribosomal RNA 8822301 protein-coding Snx30 sorting nexin family member 30 INVOLVED IN positive regulation of autophagosome assembly (ortholog); protein transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955419 14567317 14645442 - 102028419 AGCD01020029;AGCD01020030;AGCD01020031;AGCD01020032;GBDJ01369598;XM_005382931 XP_005382988 MODEL 8707950 ncrna LOC102013619 uncharacterized LOC102013619 NW_004955421 18803353 18811236 - 102013619 AGCD01022056;GBDF01014486;XR_001233862;XR_260797 MODEL 8830196 protein-coding LOC102022848 olfactory receptor 63-like NW_004955524 308968 309918 + 102022848 AGCD01068675;XM_005409660 XP_005409717 MODEL 8940122 protein-coding LOC102008972 uncharacterized LOC102008972 NW_004955515 4155520 4227819 - 102008972 AGCD01067316;AGCD01067317;GBCE01099088;XM_013506861 XP_013362315 MODEL 8890509 pseudo LOC102012089 serine racemase pseudogene NW_004955475 6283187 6284059 - 102012089 AGCD01054958 MODEL 9026784 pseudo LOC102004974 ras-related protein Rab-5A pseudogene NW_004955438 15450726 15451498 + 102004974 AGCD01035367 MODEL 39134394 misc_rna 7SK 7SK RNA 8862512 protein-coding Wdr83 WD repeat domain 83 INVOLVED IN inflammatory response to wounding (ortholog); mRNA splicing, via spliceosome (ortholog); neural tube closure (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); melanoma (ortholog); urinary bladder cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); lysosome (ortholog) NW_004955415 31774017 31778737 + 102018387 AGCD01016697;GBDF01114913;XM_005381017 XP_005381074 MODEL 8890791 pseudo LOC102018158 nascent polypeptide-associated complex subunit alpha-like NW_004955455 10593876 10627433 + 102018158 AGCD01045958;AGCD01045959 MODEL 8931510 protein-coding Plekhm3 pleckstrin homology domain containing M3 INVOLVED IN myoblast differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955457 7065443 7239663 + 102008701 AGCD01046868;AGCD01046869;AGCD01046870;AGCD01046871;AGCD01046872;AGCD01046873;AGCD01046874;GBBH01021390;XM_005396971;XM_005396973;XM_005396974 XP_005397028;XP_005397030;XP_005397031 MODEL 8742067 ncrna LOC102007499 uncharacterized LOC102007499 NW_004955404 47564519 47595536 - 102007499 AGCD01004483;GBDF01290414;XR_001235118;XR_259342 MODEL 8791480 protein-coding Kifbp kinesin family binding protein ENCODES a protein that exhibits kinesin binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mitochondrion transport along microtubule (ortholog); transport along microtubule (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 3 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955437 22015112 22040439 - 102026908 AGCD01034926;GBDF01118171;XM_005390099 XP_005390156 MODEL 8916651 protein-coding Gpr107 G protein-coupled receptor 107 ENCODES a protein that exhibits clathrin heavy chain binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog) NW_004955513 176806 233708 + 102014595 AGCD01066817;GBDF01089101;XM_005408338 XP_005408395 MODEL 10122872 ncrna LOC106150091 uncharacterized LOC106150091 NW_004955464 1044234 1081179 - 106150091 AGCD01049944;GBCE01039814;XR_001236697 MODEL 8711700 protein-coding LOC102023200 transcription elongation factor A protein-like 5 NW_004955548 416862 420750 - 102023200 AGCD01072331;GBCE01005297;XM_005411979;XM_005411980 XP_005412036;XP_005412037 MODEL 9036935 protein-coding Bbs10 Bardet-Biedl syndrome 10 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); cone retinal bipolar cell differentiation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 10 (ortholog) NW_004955405 15571458 15574568 - 102012725 AGCD01004948;GBDJ01298756;XM_005374342 XP_005374399 MODEL 8949646 ncrna LOC102021515 uncharacterized LOC102021515 NW_004955405 40307846 40312195 - 102021515 AGCD01005512;GBDF01157665;XR_001235929;XR_259451;XR_259452 MODEL 39132385 snrna U6 U6 spliceosomal RNA 10323072 protein-coding Ct55 cancer/testis antigen 55 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH X-linked spermatogenic failure 7 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) NW_004956648 483 703 - 106147686 AGCD01079949;GBDF01225515;XM_013510232 XP_013365686 MODEL 8758606 protein-coding LOC102024582 olfactory receptor-like protein OLF3 NW_004955494 69060 69994 - 102024582 AGCD01061352;GBDF01269797;XM_013504914 XP_013360368 MODEL 8914388 ncrna LOC102023580 uncharacterized LOC102023580 NW_004955471 5893827 5894991 + 102023580 AGCD01053115;GBDF01006377;XR_263525 MODEL 9023960 protein-coding Nusap1 nucleolar and spindle associated protein 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN establishment of mitotic spindle localization (ortholog); mitotic chromosome condensation (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitotic spindle (ortholog); nucleolus (ortholog) NW_004955416 8178493 8208336 + 102006125 AGCD01017036;AGCD01017037;GBDF01043236;XM_005381279;XM_005381280 XP_005381336;XP_005381337 MODEL 9033470 pseudo LOC102025308 zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene NW_004955451 681864 682532 - 102025308 AGCD01042950 MODEL 8823284 protein-coding Mycbpap MYCBP associated protein INVOLVED IN acrosome assembly (ortholog); chemical synaptic transmission (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal central apparatus (ortholog); cytoplasm (ortholog) NW_004955451 11219180 11239028 - 102011612 AGCD01043342;GBDK01235980;XM_013519082;XM_013519083;XM_013519084 XP_013374536;XP_013374537;XP_013374538 MODEL 9028448 pseudo LOC102022850 uncharacterized protein C16orf52 homolog B-like NW_004955531 3633746 3634304 - 102022850 AGCD01070077 MODEL 39132388 snrna U6 U6 spliceosomal RNA 8936409 protein-coding Astn1 astrotactin 1 INVOLVED IN cell migration (ortholog); cell-cell adhesion (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955406 16445738 16742185 - 102017742 AGCD01005997;AGCD01005998;AGCD01005999;AGCD01006000;GBDJ01299410;XM_005374905;XM_005374906;XM_013520987;XM_013520991 XP_005374962;XP_005374963;XP_013376441;XP_013376445 MODEL 9017864 protein-coding Mlxipl MLX interacting protein like ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); energy homeostasis (ortholog); fatty acid homeostasis (ortholog); PARTICIPATES IN glycolysis/gluconeogenesis pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); coronary artery disease (ortholog); Coronary Disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955456 14096530 14116687 + 102025543 AGCD01046633;GBDF01162228;XM_005396774;XM_005396775;XM_005396776;XM_005396777;XM_005396781 XP_005396831;XP_005396832;XP_005396833;XP_005396834;XP_005396838 MODEL 8783819 protein-coding Flrt1 fibronectin leucine rich transmembrane protein 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN dendrite development (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); neuron projection extension (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); cytoplasmic vesicle (ortholog) NW_004955422 20944875 20958618 - 102022396 AGCD01023098;GBBH01221857;XM_005384646;XM_005384647;XM_005384648 XP_005384703;XP_005384704;XP_005384705 MODEL 8855373 protein-coding Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN mitochondrial ATP synthesis coupled electron transport (ortholog); mitochondrial electron transport, NADH to ubiquinone (ortholog); ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); autosomal recessive spinocerebellar ataxia 8 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955422 17876496 17881773 - 102012442 AGCD01022932;GBDJ01074830;XM_005384306 XP_005384363 MODEL 8853520 pseudo LOC102012508 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955459 6804477 6804982 + 102012508 AGCD01048085;XR_263017 MODEL 9062035 protein-coding Hoxa10 homeobox A10 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); male gonad development (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Endometrial Neoplasms (ortholog); Female Urogenital Diseases (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955410 28864785 28874454 - 102006007 AGCD01011262;AGCD01011263;GBDJ01003857;XM_005377461;XM_013510675 XP_005377518;XP_013366129 MODEL 8706978 protein-coding Sfrp4 secreted frizzled related protein 4 ENCODES a protein that exhibits Wnt-protein binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); decidualization (ortholog); female pregnancy (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); Experimental Arthritis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955460 5654187 5666475 + 102026611 AGCD01048456;GBDJ01005445;XM_005397748 XP_005397805 MODEL 8706064 protein-coding Nalf2 NALCN channel auxiliary factor 2 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955475 9024816 9052394 + 102017007 AGCD01055054;AGCD01055055;AGCD01055056;GBBH01018923;GBBH01212781;XM_005401597 XP_005401654 MODEL 9055652 pseudo LOC102010929 transcriptional repressor protein YY1-like NW_004955429 4787838 4789119 - 102010929 AGCD01028496 MODEL 39131563 protein-coding DEFB124 defensin beta 124 39132167 rrna 5S_rRNA 5S ribosomal RNA 39131618 rrna 5S_rRNA 5S ribosomal RNA 8906069 protein-coding Irf4 interferon regulatory factor 4 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); defense response to protozoan (ortholog); myeloid dendritic cell differentiation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955465 12497534 12512529 - 102026089 AGCD01050549;GBBH01228624;GBDJ01163364;XM_013521871;XM_013521872;XM_013521873 XP_013377325;XP_013377326;XP_013377327 MODEL 8794379 protein-coding Heyl hes related family bHLH transcription factor with YRPW motif like ENCODES a protein that exhibits AF-1 domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN atrioventricular valve morphogenesis (ortholog); cardiac epithelial to mesenchymal transition (ortholog); cardiac ventricle morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Carotid Artery Injuries (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 17137066 17152714 - 102024524 AGCD01044545;GBCB01005825;XM_005395248;XM_005395249;XM_005395250;XM_005395251;XM_005395252;XM_005395253;XM_013519726;XM_013519727 XP_005395305;XP_005395306;XP_005395307;XP_005395308;XP_005395309;XP_005395310;XP_013375180;XP_013375181 MODEL 8753865 pseudo LOC102003588 60S ribosomal protein L37 pseudogene NW_004955440 16839141 16839617 + 102003588 AGCD01036533 MODEL 10359248 pseudo LOC106147151 ribosome production factor 2 homolog pseudogene NW_004955523 1515879 1517585 - 106147151 AGCD01068523 MODEL 9000083 pseudo LOC102008973 translationally-controlled tumor protein pseudogene NW_004955516 2157659 2158275 + 102008973 AGCD01067449 MODEL 8760463 ncrna LOC102007892 uncharacterized LOC102007892 NW_004955417 12654544 12663569 - 102007892 AGCD01018162;GBDF01040430;XR_001233450;XR_260476 MODEL 8904780 protein-coding Gmfg glia maturation factor gamma INVOLVED IN actin filament debranching (ortholog); negative regulation of Arp2/3 complex-mediated actin nucleation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955468 213010 222464 + 102024545 AGCD01051685;GBDF01128679;GBDF01128690;XM_005399785;XM_013522379;XM_013522380 XP_005399842;XP_013377833;XP_013377834 MODEL 8732521 ncrna LOC102023581 uncharacterized LOC102023581 NW_004955414 33150630 33154924 + 102023581 AGCD01015799;GBDF01055488;XR_001233126;XR_001233127;XR_260226 MODEL 8919493 pseudo LOC102004978 DNA-directed RNA polymerases I, II, and III subunit RPABC4 pseudogene NW_004955547 2461150 2462490 - 102004978 AGCD01072282 MODEL 8981518 protein-coding Ptk2b protein tyrosine kinase 2 beta ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); enzyme binding (ortholog); INVOLVED IN actin filament organization (ortholog); activation of GTPase activity (ortholog); activation of Janus kinase activity (ortholog); PARTICIPATES IN endothelin signaling pathway; fibroblast growth factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cell body (ortholog) NW_004955403 49856056 49970800 + 102003931 AGCD01002951;AGCD01002952;AGCD01002953;GBCE01000568;XM_005373738;XM_005373739;XM_005373740;XM_005373741;XM_013514189;XM_013514191 XP_005373795;XP_005373796;XP_005373797;XP_005373798;XP_013369643;XP_013369645 MODEL 8924879 protein-coding Tsga10 testis specific 10 ENCODES a protein that exhibits structural molecule activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); motile cilium (ortholog) NW_004955470 5376749 5471904 - 102008086 AGCD01052749;AGCD01052750;AGCD01052751;GBDI01255512;XM_005400731;XM_005400734;XM_013522795;XM_013522796;XM_013522797;XM_013522799;XM_013522800 XP_005400788;XP_005400791;XP_013378249;XP_013378250;XP_013378251;XP_013378253;XP_013378254 MODEL 8773276 protein-coding LOC102018160 olfactory receptor 6C70-like NW_004955458 3167363 3168304 + 102018160 AGCD01047276;XM_013520812 XP_013376266 MODEL 9065594 ncrna LOC102007503 uncharacterized LOC102007503 NW_004955453 6872218 6875092 - 102007503 AGCD01044732;GBDF01261600;XR_001236134 MODEL 9059192 protein-coding LOC102006012 C-type lectin domain family 10 member A NW_004955467 9788155 9791911 + 102006012 AGCD01051525;GBDK01397253;XM_005399570 XP_005399627 MODEL 8742857 protein-coding Bmp3 bone morphogenetic protein 3 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN negative regulation of ossification (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955433 5194312 5246125 + 102007805 AGCD01031492;AGCD01031493;GBCE01008766;XM_005388497 XP_005388554 MODEL 8754757 protein-coding Kifc1 kinesin family member C1 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic spindle assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955437 1923136 1941094 + 102004639 AGCD01034243;AGCD01034244;GBBH01205563;XM_005389490;XM_013517018;XM_013517019;XM_013517020 XP_005389547;XP_013372472;XP_013372473;XP_013372474 MODEL 8811103 ncrna LOC102006378 uncharacterized LOC102006378 NW_004955431 11018368 11079905 + 102006378 AGCD01030216;AGCD01030217;AGCD01030218;AGCD01030219;AGCD01030220;AGCD01030221;AGCD01030222;AGCD01030223;GBDF01303264;XR_001234572;XR_261463 MODEL 9042703 ncrna LOC102023207 uncharacterized LOC102023207 NW_004955444 15292822 15398299 - 102023207 AGCD01039134;AGCD01039135;AGCD01039136;XR_262273 MODEL 8717837 ncrna LOC102010136 uncharacterized LOC102010136 NW_004955411 9963098 9981570 - 102010136 AGCD01011768;GBDF01305717;XR_259928 MODEL 8862173 protein-coding Mmaa metabolism of cobalamin associated A ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cataract (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955428 1465118 1489332 + 102008129 AGCD01027612;AGCD01027613;GBDF01225678;XM_005386653;XM_005386654;XM_005386655;XM_005386656;XM_005386657;XM_013515302;XM_013515304;XM_013515305 XP_005386710;XP_005386711;XP_005386712;XP_005386713;XP_005386714;XP_013370756;XP_013370758;XP_013370759 MODEL 8996258 ncrna LOC102003208 uncharacterized LOC102003208 NW_004955407 34429774 34446403 + 102003208 AGCD01007721;AGCD01007722;GBDF01176950;XR_259606 MODEL 8916479 protein-coding Galnt4 polypeptide N-acetylgalactosaminyltransferase 4 ENCODES a protein that exhibits manganese ion binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetylgalactosamine (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004956666 67 3521 - 102026382 AGCD01079982;GBBH01186464;GBDF01190674;XM_005415209 XP_005415266 MODEL 8963666 protein-coding Ct83 cancer/testis antigen 83 NW_004955534 3459257 3460553 + 102020376 AGCD01070584;GBDF01156435;XM_005410471 XP_005410528 MODEL 39132168 rrna 5S_rRNA 5S ribosomal RNA 8723562 protein-coding Wdr83os WD repeat domain 83 opposite strand ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH VARIABLE FAMILIAL HYPERCHOLANEMIA (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog); protein folding chaperone complex (ortholog) NW_004955415 31772401 31773916 - 102018721 AGCD01016697;GBCQ01011781;XM_005381018 XP_005381075 MODEL 9028590 protein-coding Mycl MYCL proto-oncogene, bHLH transcription factor INVOLVED IN regulation of inner ear auditory receptor cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung small cell carcinoma (ortholog); medulloblastoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog) NW_004955452 17390285 17397115 - 102030380 AGCD01044553;GBDJ01358412;XM_005395269 XP_005395326 MODEL 8792735 pseudo LOC102022853 protein angel homolog 2-like NW_004955534 654955 656762 - 102022853 AGCD01070461;AGCD01070462 MODEL 39134096 misc_rna 7SK 7SK RNA 39132389 snrna U6 U6 spliceosomal RNA 9005393 protein-coding LOC102005326 zinc finger protein 271-like NW_004955402 22009497 22049009 + 102005326 AGCD01000595;AGCD01000596;AGCD01000597;AGCD01000598;GBDJ01165251;XM_005372797;XM_005372798;XM_005372799;XM_013509230;XM_013509319;XM_013509375;XM_013509440 XP_005372854;XP_005372855;XP_005372856;XP_013364684;XP_013364773;XP_013364829;XP_013364894 MODEL 8815586 protein-coding Gpr108 G protein-coupled receptor 108 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of toll-like receptor signaling pathway (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cis-Golgi network membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955495 2782549 2789470 + 102006146 AGCD01061799;GBDJ01001980;XM_005405699;XM_013505199;XM_013505200;XM_013505201;XM_013505202;XM_013505203 XP_005405756;XP_013360653;XP_013360654;XP_013360655;XP_013360656;XP_013360657 MODEL 9016582 protein-coding Bbs12 Bardet-Biedl syndrome 12 INVOLVED IN chaperone-mediated protein complex assembly (ortholog); eating behavior (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 12 (ortholog) NW_004955428 17957672 17966638 - 102013634 AGCD01028054;AGCD01028055;GBDJ01171174;XM_005386764;XM_005386765;XM_005386766;XM_005386767;XM_005386768 XP_005386821;XP_005386822;XP_005386823;XP_005386824;XP_005386825 MODEL 10183550 ncrna LOC106150092 uncharacterized LOC106150092 NW_004955464 1059233 1061237 - 106150092 AGCD01049944;GBDF01137944;XR_001236698 MODEL 9028012 protein-coding CUNH1orf185 chromosome unknown C1orf185 homolog ASSOCIATED WITH atrial fibrillation (ortholog) NW_004955464 7858273 7894407 - 102026616 AGCD01050071;GBDK01325480;XM_013521763 XP_013377217 MODEL 8907186 protein-coding Snx31 sorting nexin 31 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955417 15779500 15835668 - 102018494 AGCD01018243;GBCE01074372;XM_005381870;XM_013512837;XM_013512838 XP_005381927;XP_013368291;XP_013368292 MODEL 8904016 protein-coding LOC102013622 zinc finger protein 782-like NW_004955422 23753650 23770962 + 102013622 AGCD01023205;AGCD01023206;GBCB01120769;XM_013513988;XM_013513989 XP_013369442;XP_013369443 MODEL 8995866 protein-coding Nampt nicotinamide phosphoribosyltransferase ENCODES a protein that exhibits cytokine activity (ortholog); heterocyclic compound binding (ortholog); identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to amyloid-beta (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN niacin metabolic pathway; nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Cancer, Familial (ortholog); carotid artery disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955410 10717664 10742109 - 102017104 AGCD01010796;AGCD01010797;GBCB01020855;XM_013510535 XP_013365989 MODEL 8792317 protein-coding Sfrp5 secreted frizzled related protein 5 INVOLVED IN convergent extension involved in axis elongation (ortholog); digestive tract morphogenesis (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cholangiocarcinoma (ortholog); Colorectal Neoplasms (ortholog) NW_004955507 3836607 3841910 - 102007576 AGCD01065638;GBDI01216661;XM_005407640 XP_005407697 MODEL 39134395 misc_rna 7SK 7SK RNA 9006037 protein-coding LOC102003590 olfactory receptor 1361-like NW_004955442 14147658 14149906 - 102003590 AGCD01037802;XM_013517700 XP_013373154 MODEL 9058127 protein-coding Nutf2 nuclear transport factor 2 ENCODES a protein that exhibits identical protein binding (ortholog); nuclear import signal receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of vascular endothelial growth factor production (ortholog); positive regulation of protein import into nucleus (ortholog); protein export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); diabetic retinopathy (ortholog); FOUND IN cytosol (ortholog); nuclear inner membrane (ortholog); nuclear membrane (ortholog) NW_004955484 8832871 8854151 - 102021448 AGCD01058398;GBCB01000822;XM_005403618;XM_005403619;XM_013503884;XM_013503885;XM_013503886 XP_005403675;XP_005403676;XP_013359338;XP_013359339;XP_013359340 MODEL 8845698 protein-coding Plekhn1 pleckstrin homology domain containing N1 ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol phosphate binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); positive regulation of apoptotic process (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoskeleton (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955486 9736801 9744659 - 102011126 AGCD01059198;GBDJ01386505;XM_005404287;XM_005404288 XP_005404344;XP_005404345 MODEL 8731107 protein-coding Hfe homeostatic iron regulator ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); co-receptor binding (ortholog); peptide antigen binding (ortholog); INVOLVED IN acute-phase response (ortholog); BMP signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); alcohol-associated liver disease (ortholog); Alzheimer's disease (ortholog); FOUND IN apical part of cell (ortholog); basal part of cell (ortholog); cytoplasmic vesicle (ortholog) NW_004955483 933269 941070 - 102021973 AGCD01057637;GBCQ01129220;XM_005403312 XP_005403369 MODEL 8964357 pseudo LOC102023584 WW domain-binding protein 11 pseudogene NW_004955473 2379581 2381523 + 102023584 AGCD01053901 MODEL 8789063 protein-coding Daxx death domain associated protein ENCODES a protein that exhibits ATP-dependent H3-H4 histone complex chaperone activity (ortholog); enzyme binding (ortholog); histone binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); apoptotic signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN aldosterone signaling pathway; histone modification pathway; p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); appendiceal neoplasm (ortholog); FOUND IN cell body (ortholog); cell cortex (ortholog); chromosome, centromeric region (ortholog) NW_004955437 1869692 1874041 - 102003905 AGCD01034241;GBDF01047879;XM_013516888 XP_013372342 MODEL 9002812 protein-coding Fancc FA complementation group C INVOLVED IN brain morphogenesis (ortholog); cellular response to oxidative stress (ortholog); gamete generation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aspirin-induced respiratory disease (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955422 22031825 22246478 - 102004830 AGCD01023145;AGCD01023146;AGCD01023147;AGCD01023148;AGCD01023149;AGCD01023150;AGCD01023151;AGCD01023152;GBDF01041485;XM_005384680;XM_013514336;XM_013514337;XM_013514338 XP_005384737;XP_013369790;XP_013369791;XP_013369792 MODEL 8842502 protein-coding Gmip GEM interacting protein ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955524 2380099 2389154 + 102015442 AGCD01068812;AGCD01068813;GBDK01081607;XM_005409642;XM_005409645;XM_013507273;XM_013507274;XM_013507275 XP_005409699;XP_005409702;XP_013362727;XP_013362728;XP_013362729 MODEL 8962982 protein-coding Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); mitochondrial electron transport, NADH to ubiquinone (ortholog); nervous system development (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955402 2802366 2818049 - 102026370 AGCD01000091;GBDF01008260;GBDI01016025;XM_013516007 XP_013371461 MODEL 8772217 ncrna LOC102007508 uncharacterized LOC102007508 NW_004955406 43082611 43102023 - 102007508 AGCD01006724;XR_001230800 MODEL 8791414 pseudo LOC102021516 chromodomain Y-like protein pseudogene NW_004955405 15378726 15379619 + 102021516 AGCD01004944 MODEL 8787685 protein-coding Hoxa11 homeobox A11 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); ASSOCIATED WITH amenorrhea (ortholog); cervical cancer (ortholog); chronic kidney disease (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) NW_004955410 28875780 28879643 - 102007413 AGCD01011263;AGCD01011264;GBDJ01179922;XM_013510674 XP_013366128 MODEL 8949963 protein-coding Kifc2 kinesin family member C2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955454 3087168 3093916 + 102007506 AGCD01045051;GBBH01163884;XM_005395892;XM_005395893 XP_005395949;XP_005395950 MODEL 8796836 pseudo LOC102012095 heterogeneous nuclear ribonucleoprotein M pseudogene NW_004955417 9967960 9969097 + 102012095 AGCD01018063 MODEL 39131619 rrna 5S_rRNA 5S ribosomal RNA 8999496 protein-coding LOC102010931 olfactory receptor 9G4-like NW_004955511 1803413 1804351 - 102010931 AGCD01066380;XM_005407978 XP_005408035 MODEL 8822981 protein-coding Defb127 defensin beta 127 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog) NW_004955597 38613 40241 + 102025199 AGCD01076533;XM_005414733 XP_005414790 MODEL 8937212 ncrna LOC102025311 uncharacterized LOC102025311 NW_004955731 721 6575 - 102025311 AGCD01078225;GBDJ01142499;XR_001232594 MODEL 8818388 protein-coding LOC102024584 NUT family member 2G NW_004955422 23875419 23883131 + 102024584 AGCD01023210;GBDF01010838;XM_013513990;XM_013513991 XP_013369444;XP_013369445 MODEL 8745286 pseudo LOC102003213 chromobox protein homolog 3 pseudogene NW_004955408 30983925 30997950 + 102003213 AGCD01008818;AGCD01008819 MODEL 10203548 ncrna LOC106149299 uncharacterized LOC106149299 NW_004955442 9937513 9942584 + 106149299 AGCD01037694;GBDF01133229;XR_001235371 MODEL 8862592 protein-coding Irf6 interferon regulatory factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell development (ortholog); cranial skeletal system development (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH anodontia (ortholog); Breast Cancer, Familial (ortholog); cleft lip (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955489 2404773 2434729 + 102020923 AGCD01059870;GBDI01261695;XM_005404525;XM_005404526;XM_005404527;XM_005404528;XM_005404529;XM_005404530;XM_005404531;XM_005404532;XM_013504473;XM_013504474;XM_013504475 XP_005404582;XP_005404583;XP_005404584;XP_005404585;XP_005404586;XP_005404587;XP_005404588;XP_005404589;XP_013359927;XP_013359928;XP_013359929 MODEL 8988473 protein-coding Nanog Nanog homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cell differentiation (ortholog); cellular response to erythropoietin (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon cancer (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); FOUND IN chromatin (ortholog); condensed chromosome (ortholog); nucleolus (ortholog) NW_004955413 6561323 6565770 + 102018587 AGCD01013754;GBDF01115089;XM_005379613 XP_005379670 MODEL 8775797 protein-coding Ctage5 CTAGE family member 5, ER export factor NW_004955409 21968308 22081072 - 102014985 AGCD01009998;AGCD01009999;AGCD01010000;AGCD01010001;AGCD01010002;AGCD01010003;AGCD01010004;AGCD01010005;AGCD01010006;AGCD01010007;AGCD01010008;GBCB01001295;XM_005376883 XP_005376940 MODEL 8861434 protein-coding Wdr86 WD repeat domain 86 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955491 5739715 5765469 - 102008115 AGCD01060499;AGCD01060500;AGCD01060501;GBCE01031431;GBCQ01153453;XM_005404830 XP_005404887 MODEL 8894783 ncrna LOC102018165 uncharacterized LOC102018165 NW_004955409 31850420 31855944 - 102018165 AGCD01010341;AGCD01010342;GBDF01146276;XR_259800 MODEL 8720449 pseudo LOC102012517 60S ribosomal protein L38 pseudogene NW_004955412 19711838 19712048 + 102012517 AGCD01012971 MODEL 8792792 protein-coding Defb128 defensin beta 128 INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); response to wounding (ortholog) NW_004955597 64950 66692 - 102025530 AGCD01076536;GBDF01142541;XM_005414734 XP_005414791 MODEL 8954285 pseudo LOC102006015 cysteine-rich PDZ-binding protein pseudogene NW_004955469 267316 267629 + 102006015 AGCD01052216;XR_263422 MODEL 8867776 protein-coding Flrt2 fibronectin leucine rich transmembrane protein 2 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); basement membrane organization (ortholog); cell adhesion involved in heart morphogenesis (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uveal melanoma (ortholog); FOUND IN cell-cell junction (ortholog); extracellular region (ortholog); focal adhesion (ortholog) NW_004955438 8565319 8656195 + 102029008 AGCD01035161;AGCD01035162;GBCE01053936;XM_005390242;XM_005390243;XM_005390244;XM_005390246;XM_013517210;XM_013517211;XM_013517212;XM_013517213 XP_005390299;XP_005390300;XP_005390301;XP_005390303;XP_013372664;XP_013372665;XP_013372666;XP_013372667 MODEL 9045788 protein-coding Bmp4 bone morphogenetic protein 4 ENCODES a protein that exhibits BMP receptor binding (ortholog); chemoattractant activity (ortholog); co-receptor binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure regression (ortholog); angiogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glypican signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); Acute Otitis Media (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955409 9432835 9439680 + 102005114 AGCD01009440;AGCD01009441;GBCQ01040326;XM_005376769;XM_005376770 XP_005376826;XP_005376827 MODEL 8801126 protein-coding Gpr119 G protein-coupled receptor 119 ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); INVOLVED IN insulin secretion (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955473 4686225 4687232 + 102006655 AGCD01053957;XM_005401235 XP_005401292 MODEL 8731791 protein-coding CUNH1orf198 chromosome unknown C1orf198 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955492 7762534 7774394 + 102025256 AGCD01060803;GBDI01182845;XM_005405022 XP_005405079 MODEL 9066919 protein-coding LOC102007509 uncharacterized LOC102007509 NW_004955406 41604564 41614798 + 102007509 AGCD01006688;GBDI01238964;XM_013523033;XR_001237101;XR_001237102;XR_001237104;XR_001237106;XR_001237107 XP_013378487 MODEL 10138059 ncrna LOC106150093 uncharacterized LOC106150093 NW_004955464 7696776 7698418 + 106150093 AGCD01050067;GBDF01090347;XR_001236699 MODEL 8788673 protein-coding Mmab metabolism of cobalamin associated B ENCODES a protein that exhibits cobalamin binding (ortholog); corrinoid adenosyltransferase activity (ortholog); transferase activity, transferring alkyl or aryl (other than methyl) groups (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); genetic disease (ortholog); glycogen storage disease I (ortholog); FOUND IN mitochondrion (ortholog) NW_004955455 8954099 8985170 + 102020084 AGCD01045912;AGCD01045913;GBDK01324377;XM_005396450;XM_013520337 XP_005396507;XP_013375791 MODEL 8713491 protein-coding Galnt5 polypeptide N-acetylgalactosaminyltransferase 5 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955449 16051293 16113069 - 102017616 AGCD01042208;GBDF01039827;XM_005393412;XR_001235826 XP_005393469 MODEL 39132171 rrna 5S_rRNA 5S ribosomal RNA 9066884 pseudo LOC102004979 survival of motor neuron-related-splicing factor 30 pseudogene NW_004955548 1417585 1418300 - 102004979 AGCD01072375 MODEL 8897703 protein-coding Astn2 astrotactin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); INVOLVED IN establishment of body hair planar orientation (ortholog); negative regulation of protein localization to cell surface (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN cell pole (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955419 10486200 11387553 + 102003344 AGCD01019945;AGCD01019946;AGCD01019947;AGCD01019948;AGCD01019949;AGCD01019950;AGCD01019951;AGCD01019952;AGCD01019953;AGCD01019954;AGCD01019955;GBBH01184955;XM_005382610;XM_013513260;XM_013513261;XM_013513263 XP_005382667;XP_013368714;XP_013368715;XP_013368717 MODEL 9061870 protein-coding LOC102024586 olfactory receptor 7E24-like NW_004955495 767666 768702 + 102024586 AGCD01061653;XM_013505093 XP_013360547 MODEL 8847616 pseudo LOC102022856 laccase domain-containing protein 1-like NW_004955437 12874324 12875703 + 102022856 AGCD01034624 MODEL 8943682 protein-coding Mycn MYCN proto-oncogene, bHLH transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); kinase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); branching morphogenesis of an epithelial tube (ortholog); cartilage condensation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN Myc-Max complex (ortholog); nucleus (ortholog) NW_004955487 9219528 9224818 + 102012657 AGCD01059455;GBDK01101398;XM_005404445;XM_005404446 XP_005404502;XP_005404503 MODEL 8977426 pseudo LOC102005328 peroxiredoxin-1 pseudogene NW_004955402 31453916 31455006 + 102005328 AGCD01000789 MODEL 8782846 protein-coding Plekho1 pleckstrin homology domain containing O1 INVOLVED IN lamellipodium morphogenesis (ortholog); myoblast fusion (ortholog); myoblast migration (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); muscle cell projection membrane (ortholog) NW_004955413 603011 606487 - 102012525 AGCD01013481;GBDF01000598;GBDK01001593;XM_013511531 XP_013366985 MODEL 8991492 pseudo LOC102006382 non-histone chromosomal protein HMG-14 pseudogene NW_004955515 1139391 1139869 - 102006382 AGCD01067220 MODEL 8895701 protein-coding Irf7 interferon regulatory factor 7 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); defense response to virus (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955476 11442781 11445706 + 102013410 AGCD01055458;GBBH01064524;XM_005401824;XM_005401825;XM_005401826;XM_013502973;XM_013502974;XM_013502975;XM_013502976 XP_005401881;XP_005401882;XP_005401883;XP_013358427;XP_013358428;XP_013358429;XP_013358430 MODEL 8791816 ncrna LOC102010145 uncharacterized LOC102010145 NW_004955414 6341018 6344268 - 102010145 AGCD01014918;GBDK01371346;XR_001233178;XR_260156 MODEL 8932641 protein-coding Dazap1 DAZ associated protein 1 ENCODES a protein that exhibits poly(G) binding (ortholog); poly(U) RNA binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN cell population proliferation (ortholog); maternal placenta development (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955495 6499553 6516227 - 102004293 AGCD01062082;GBBH01091781;GBCB01025416;XM_005405970;XM_005405971;XM_005405972;XM_005405973 XP_005406027;XP_005406028;XP_005406029;XP_005406030 MODEL 8726807 protein-coding Fancd2 FA complementation group D2 ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN brain morphogenesis (ortholog); cellular response to oxidative stress (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN condensed chromosome (ortholog); DNA repair complex (ortholog); nuclear body (ortholog) NW_004955561 1460080 1538026 + 102015783 AGCD01073855;AGCD01073856;GBDF01081668;XM_005413059;XM_005413060;XM_005413062;XM_013509097;XM_013509098;XM_013509099 XP_005413116;XP_005413117;XP_005413119;XP_013364551;XP_013364552;XP_013364553 MODEL 8812304 protein-coding LOC102021518 dimethylaniline monooxygenase [N-oxide-forming] 3 NW_004955406 11764264 11781996 + 102021518 AGCD01005895;AGCD01005896;GBBH01063317;XM_005374830 XP_005374887 MODEL 8717808 pseudo LOC102008974 DNA primase small subunit pseudogene NW_004955434 12000624 12001975 + 102008974 AGCD01032382 MODEL 9002418 pseudo LOC102013626 tyrosine-protein phosphatase non-receptor type 2 pseudogene NW_004955497 1815456 1816689 + 102013626 AGCD01062473 MODEL 8915280 protein-coding Kifc3 kinesin family member C3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial cell-cell adhesion (ortholog); Golgi organization (ortholog); microtubule-based process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); Golgi apparatus (ortholog); kinesin complex (ortholog) NW_004955433 15365944 15428502 - 102004843 AGCD01031752;GBBH01214893;XM_013516178;XM_013516179;XM_013516180;XM_013516181;XM_013516182;XM_013516183;XM_013516184;XM_013516185;XM_013516186;XM_013516187;XM_013516188;XM_013516189;XM_013516190;XM_013516191;XM_013516192 XP_013371632;XP_013371633;XP_013371634;XP_013371635;XP_013371636;XP_013371637;XP_013371638;XP_013371639;XP_013371640;XP_013371641;XP_013371642;XP_013371643;XP_013371644;XP_013371645;XP_013371646 MODEL 8812392 protein-coding Snx33 sorting nexin 33 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955450 2669993 2682503 - 102025744 AGCD01042393;AGCD01042394;GBCQ01127590;XM_005393502 XP_005393559 MODEL 8709854 protein-coding Ptk6 protein tyrosine kinase 6 ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell migration (ortholog); cellular response to retinoic acid (ortholog); intestinal epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955528 687996 695596 + 102009754 AGCD01069542;GBCQ01083858;XM_005409962 XP_005410019 MODEL 10391227 ncrna LOC106149300 uncharacterized LOC106149300 NW_004955442 14986826 14995339 - 106149300 AGCD01037853;GBDI01024352;XR_001235373;XR_001235374 MODEL 10085183 ncrna LOC106147152 uncharacterized LOC106147152 NW_004955523 1550074 1561204 + 106147152 AGCD01068525;GBCE01156577;XR_001231921 MODEL 39132390 snrna U6 U6 spliceosomal RNA 8912261 protein-coding Tsga10ip testis specific 10 interacting protein NW_004955422 19372072 19389144 - 102022710 AGCD01023002;AGCD01023003;AGCD01023004;AGCD01023005;GBDF01008093;XM_005384439 XP_005384496 MODEL 8951094 ncrna LOC102023590 uncharacterized LOC102023590 NW_004955416 31600128 31619543 - 102023590 AGCD01017765;AGCD01017766;GBDF01122136;XR_001233369;XR_001233370;XR_001233371 MODEL 8775760 protein-coding Ctbp1 C-terminal binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); GABA-ergic synapse (ortholog) NW_004955514 630168 652817 - 102014387 AGCD01067016;GBCC01048888;XM_005408694;XM_005408695 XP_005408751;XP_005408752 MODEL 8920668 protein-coding LOC102023216 uncharacterized LOC102023216 NW_004955403 17656915 17673294 - 102023216 AGCD01002084;GBDK01310107;XM_013514765 XP_013370219 MODEL 8885766 protein-coding Wdr88 WD repeat domain 88 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955468 551574 563630 + 102015187 AGCD01051712;GBDF01088193;XM_013522282 XP_013377736 MODEL 8834817 pseudo LOC102018166 serine-threonine kinase receptor-associated protein-like NW_004955409 35958599 35960059 + 102018166 AGCD01010437 MODEL 9008684 protein-coding Ndufv3 NADH:ubiquinone oxidoreductase subunit V3 INVOLVED IN mitochondrial ATP synthesis coupled electron transport (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955407 39029943 39039425 - 102007972 AGCD01007821;GBCQ01008885;XM_005375804;XM_005375805;XM_005375806;XM_013505043 XP_005375861;XP_005375862;XP_005375863;XP_013360497 MODEL 8869182 protein-coding Myct1 MYC target 1 INVOLVED IN hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955439 9065983 9086491 - 102027344 AGCD01035825;AGCD01035826;GBCQ01031362;XM_005390572 XP_005390629 MODEL 8892951 ncrna LOC102007893 uncharacterized LOC102007893 NW_004955417 25416076 25425950 - 102007893 AGCD01018480;GBDF01236896;XR_260494 MODEL 39131620 rrna 5S_rRNA 5S ribosomal RNA 39134396 misc_rna 7SK 7SK RNA 8933396 protein-coding Hoxa13 homeobox A13 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); animal organ morphogenesis (ortholog); artery morphogenesis (ortholog); ASSOCIATED WITH Anorectal Malformations (ortholog); Congenital Hand Deformities (ortholog); Female Urogenital Diseases (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 28887952 28893515 - 102026840 AGCD01011265;GBDF01224342;XM_013510484;XR_001232705 XP_013365938 MODEL 8724001 pseudo LOC102010932 olfactory receptor 10AG1-like NW_004955511 901202 903998 - 102010932 AGCD01066346 MODEL 9029747 pseudo LOC102003214 graves disease carrier protein pseudogene NW_004955459 10102037 10104221 + 102003214 AGCD01048180 MODEL 9002026 protein-coding LOC102025314 keratin-associated protein 4-7-like NW_004955451 15520664 15521510 - 102025314 AGCD01043612;AGCD01043613;XM_013519127 XP_013374581 MODEL 9025490 protein-coding Sfswap splicing factor SWAP INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA 5'-splice site recognition (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955482 808684 871377 - 102026112 AGCD01057189;GBDI01121728;XM_005402976;XM_005402977;XM_005402978;XM_005402980;XM_005402981;XM_005402983;XM_005402984 XP_005403033;XP_005403034;XP_005403035;XP_005403037;XP_005403038;XP_005403040;XP_005403041 MODEL 8935343 protein-coding Nutm1 NUT midline carcinoma family member 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955416 258304 271670 - 102018390 AGCD01016791;GBDF01127514;XM_005381151 XP_005381208 MODEL 8806010 protein-coding CUNH1orf210 chromosome unknown C1orf210 homolog ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); ovarian cancer (ortholog); FOUND IN early endosome (ortholog); recycling endosome (ortholog) NW_004955537 2876176 2892379 - 102022959 AGCD01070939;GBDK01283088;XM_005410640;XM_005410641;XM_005410642;XM_005410643;XM_005410644;XM_013507814 XP_005410697;XP_005410698;XP_005410699;XP_005410700;XP_005410701;XP_013363268 MODEL 8890332 protein-coding LOC102007511 immunoglobulin omega chain-like NW_004955455 6477568 6478007 + 102007511 AGCD01045797;GBDI01376516;XM_013520310 XP_013375764 MODEL 8856077 protein-coding LOC102008978 putative HLA class I histocompatibility antigen, alpha chain H NW_004955437 59805 63404 - 102008978 AGCD01034100;GBBH01004597;XM_013516921;XM_013516922;XM_013516923;XM_013516924;XR_001235068;XR_001235069 XP_013372375;XP_013372376;XP_013372377;XP_013372378 MODEL 8736136 protein-coding Hfm1 helicase for meiosis 1 INVOLVED IN resolution of meiotic recombination intermediates (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); azoospermia (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955423 2993723 3088391 + 102028767 AGCD01023496;AGCD01023497;AGCD01023498;AGCD01023499;AGCD01023500;AGCD01023501;GBDF01277410;XM_005385067;XM_013514356;XM_013514357 XP_005385124;XP_013369810;XP_013369811 MODEL 8770722 protein-coding LOC102024589 hypoxanthine-guanine phosphoribosyltransferase-like NW_004955498 4154694 4155460 - 102024589 AGCD01062973;XM_005406405 XP_005406462 MODEL 9029471 pseudo LOC102012518 mortality factor 4-like protein 2 NW_004955466 3112875 3113758 - 102012518 AGCD01050786 MODEL 8707149 ncrna LOC102005329 uncharacterized LOC102005329 NW_004955602 418672 420204 - 102005329 AGCD01076784;GBDF01158942;XR_265157 MODEL 9054350 protein-coding Bbs2 Bardet-Biedl syndrome 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); artery smooth muscle contraction (ortholog); brain morphogenesis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/2, Digenic (ortholog); FOUND IN BBSome (ortholog); ciliary basal body (ortholog); ciliary membrane (ortholog) NW_004955433 14266190 14321780 - 102016408 AGCD01031711;GBDK01058610;XM_005388353;XM_013516125 XP_005388410;XP_013371579 MODEL 8955178 protein-coding Asxl1 ASXL transcriptional regulator 1 ENCODES a protein that exhibits nuclear retinoic acid receptor binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone development (ortholog); bone marrow development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); atrial heart septal defect (ortholog); FOUND IN nucleus (ortholog); PR-DUB complex (ortholog) NW_004955422 28662392 28721896 - 102008234 AGCD01023365;AGCD01023366;GBCB01085932;GBDF01052888;XM_005384868 XP_005384925 MODEL 8711176 pseudo LOC102012100 target of rapamycin complex 2 subunit MAPKAP1-like NW_004955421 30163102 30165459 + 102012100 AGCD01022382 MODEL 8860435 protein-coding Defb129 defensin beta 129 NW_004955597 116468 119192 + 102025861 AGCD01076541;XM_005414735 XP_005414792 MODEL 8817191 pseudo LOC102006386 muskelin-like NW_004955526 3588762 3591143 - 102006386 AGCD01069337 MODEL 9063569 protein-coding Flrt3 fibronectin leucine rich transmembrane protein 3 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cell-cell adhesion (ortholog); embryonic morphogenesis (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism 21 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); Spontaneous Abortions (ortholog); FOUND IN axon terminus (ortholog); axonal growth cone (ortholog); cell-cell junction (ortholog) NW_004955415 23669749 23683235 - 102004804 AGCD01016560;GBDK01192877;XM_005380892;XM_013512282 XP_005380949;XP_013367736 MODEL 8709724 protein-coding Gpr12 G protein-coupled receptor 12 ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH obesity (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955497 6248096 6251106 - 102029530 AGCD01062628;GBDK01402621;XM_005406351 XP_005406408 MODEL 39134097 misc_rna 7SK 7SK RNA 8834918 protein-coding Nanos1 nanos C2HC-type zinc finger 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN cell migration (ortholog); cerebellar neuron development (ortholog); epithelial cell migration (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); spermatogenic failure 12 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955431 23538224 23540039 + 102020694 AGCD01030538;GBCB01034500;GBCQ01012977;XM_005387911 XP_005387968 MODEL 39132173 rrna 5S_rRNA 5S ribosomal RNA 9005615 pseudo LOC102013627 60S ribosomal protein L17 pseudogene NW_004955424 15289709 15291262 - 102013627 AGCD01024701 MODEL 9052662 protein-coding Kin Kin17 DNA and RNA binding protein ENCODES a protein that exhibits double-stranded DNA binding (ortholog); RNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear matrix (ortholog) NW_004955421 24196909 24234320 - 102009618 AGCD01022209;GBDK01060925;XM_005383878 XP_005383935 MODEL 8819963 protein-coding Galnt6 polypeptide N-acetylgalactosaminyltransferase 6 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetylgalactosamine (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955547 1828767 1859327 - 102025624 AGCD01072247;AGCD01072248;AGCD01072249;GBDJ01015945;XM_005411909;XR_001232221 XP_005411966 MODEL 8708813 protein-coding Gml glycosylphosphatidylinositol anchored molecule like NW_004955454 1724929 1735380 + 102025079 AGCD01044979;AGCD01044980;AGCD01044981;GBDF01052200;XM_005395752 XP_005395809 MODEL 39134098 misc_rna 7SK 7SK RNA 8993240 protein-coding LOC102004982 uncharacterized LOC102004982 NW_004955558 812403 851364 - 102004982 AGCD01073392;AGCD01073393;AGCD01073394;GBDF01050328;XM_013508873;XM_013508874;XM_013508875;XM_013508876;XM_013508877;XM_013508878;XM_013508879;XM_013508880;XR_001232320;XR_001232321;XR_001232322;XR_001232323 XP_013364327;XP_013364328;XP_013364329;XP_013364330;XP_013364331;XP_013364332;XP_013364333;XP_013364334 MODEL 153211029 protein-coding PLEKHO2 pleckstrin homology domain containing O2 10128912 ncrna LOC106147153 uncharacterized LOC106147153 NW_004955523 1589987 1603096 + 106147153 AGCD01068529;AGCD01068530;AGCD01068531;GBDJ01304796;XR_001231922 MODEL 8736405 protein-coding LOC102006019 olfactory receptor 51I2-like NW_004955414 21379795 21380742 - 102006019 AGCD01015417;XM_005380088 XP_005380145 MODEL 8875293 protein-coding Bmp5 bone morphogenetic protein 5 ENCODES a protein that exhibits BMP receptor binding (ortholog); INVOLVED IN allantois development (ortholog); anterior head development (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrioventricular septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955411 450674 557213 + 102003741 AGCD01011458;AGCD01011459;AGCD01011460;AGCD01011461;GBCE01076623;XM_005377586;XM_013510909 XP_005377643;XP_013366363 MODEL 9017910 pseudo LOC102003591 etoposide-induced protein 2.4 homolog pseudogene NW_004955442 5873690 5874760 - 102003591 AGCD01037571 MODEL 8969679 protein-coding Irf8 interferon regulatory factor 8 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); Behcet's disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955541 973004 988493 + 102020714 AGCD01071367;GBDF01090291;XM_005410985;XM_013507991 XP_005411042;XP_013363445 MODEL 10241662 protein-coding LOC106150094 basic salivary proline-rich protein 1-like NW_004955464 6285341 6285841 - 106150094 AGCD01050023;GBCQ01044540;XM_013521721 XP_013377175 MODEL 8762871 pseudo LOC102012105 39S ribosomal protein L33, mitochondrial pseudogene NW_004955425 1338173 1339060 + 102012105 AGCD01025221;XM_005386083 MODEL 8779362 protein-coding Fancd2os FANCD2 opposite strand INVOLVED IN negative regulation of testosterone biosynthetic process (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); Fanconi anemia complementation group D2 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955561 1538960 1542130 - 102017072 AGCD01073856;GBDF01078505;XM_005413064 XP_005413121 MODEL 8736249 protein-coding Neb nebulin ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); anxiety disorder (ortholog); FOUND IN contractile muscle fiber (ortholog); myofibril (ortholog); protein-containing complex (ortholog) NW_004955440 17060303 17259558 - 102005512 AGCD01036558;AGCD01036559;AGCD01036560;AGCD01036561;AGCD01036562;AGCD01036563;GBDF01053409;XM_013517490 XP_013372944 MODEL 8794510 ncrna LOC102003217 uncharacterized LOC102003217 NW_004955410 22917245 22920183 + 102003217 AGCD01011087;GBDF01124788;XR_259857 MODEL 8956055 protein-coding Snx4 sorting nexin 4 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); insulin receptor binding (ortholog); leptin receptor binding (ortholog); INVOLVED IN endocytic recycling (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of histamine secretion by mast cell (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic dynein complex (ortholog); early endosome (ortholog) NW_004955427 24520125 24579589 - 102022835 AGCD01027512;AGCD01027513;GBDF01152970;XM_005386551 XP_005386608 MODEL 8709149 protein-coding LOC102007512 keratin-associated protein 10-7-like NW_004955407 41555800 41557892 - 102007512 AGCD01007870;XM_005375893 XP_005375950 MODEL 39132391 snrna U6 U6 spliceosomal RNA 8876856 protein-coding Sft2d1 SFT2 domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955439 15555080 15575698 + 102027115 AGCD01036004;GBBH01064219;XM_005390657 XP_005390714 MODEL 8953086 ncrna LOC102023591 uncharacterized LOC102023591 NW_004955479 8676663 8679973 + 102023591 AGCD01056451;GBDF01304727;XR_263737 MODEL 8753161 protein-coding Dazap2 DAZ associated protein 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN protein destabilization (ortholog); stress granule assembly (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear body (ortholog) NW_004955547 1736945 1741623 + 102024284 AGCD01072245;GBCQ01010362;XM_005411904 XP_005411961 MODEL 8850169 protein-coding Kirrel1 kirre like nephrin family adhesion molecule 1 ENCODES a protein that exhibits myosin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-cell junction maintenance (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cell projection membrane (ortholog); cell-cell junction (ortholog); dendritic shaft (ortholog) NW_004955468 9820649 9919958 + 102020646 AGCD01052060;AGCD01052061;AGCD01052062;GBCE01154497;XM_005400135;XM_013522482;XM_013522483 XP_005400192;XP_013377936;XP_013377937 MODEL 8810062 ncrna LOC102018169 uncharacterized LOC102018169 NW_004955411 3795767 3797434 - 102018169 AGCD01011556;XR_259914 MODEL 8785592 protein-coding Ctbp2 C-terminal binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); nuclear retinoic acid receptor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of retinoic acid receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955477 2922334 3082088 - 102006028 AGCD01055535;AGCD01055536;AGCD01055537;AGCD01055538;GBBH01119744;XM_005401984;XM_005401985;XM_005401986;XM_013503033 XP_005402041;XP_005402042;XP_005402043;XP_013358487 MODEL 8749459 protein-coding Mmachc metabolism of cobalamin associated C ENCODES a protein that exhibits cyanocobalamin reductase (cyanide-eliminating) (NADP+) activity (ortholog); demethylase activity (ortholog); FAD binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); demethylation (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); cataract (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955464 12774018 12780612 - 102028839 AGCD01050228;GBDK01115845;XM_005398703 XP_005398760 MODEL 8830860 pseudo LOC102021519 purine nucleoside phosphorylase pseudogene NW_004955406 14154246 14154836 - 102021519 AGCD01005958 MODEL 8875280 protein-coding Myd88 MYD88 innate immune signal transduction adaptor ENCODES a protein that exhibits ATP-dependent histone chaperone activity (ortholog); identical protein binding (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); apoptotic process (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955427 25553589 25557654 + 102005823 AGCD01027545;GBCE01073973;XM_005386593 XP_005386650 MODEL 10286414 ncrna LOC106147154 uncharacterized LOC106147154 NW_004955523 1100850 1112300 + 106147154 AGCD01068499;XR_001231923;XR_001231924 MODEL 9030355 ncrna LOC102006393 uncharacterized LOC102006393 NW_004955439 11260396 11262507 + 102006393 AGCD01035896;GBBH01057642;XR_261980 MODEL 10291915 protein-coding Defb134 defensin beta 134 ASSOCIATED WITH thoracic aortic aneurysm (ortholog) NW_004955403 53215271 53221539 - 106148664 AGCD01003043;AGCD01003044;AGCD01003045;XM_013514937 XP_013370391 MODEL 8964911 pseudo LOC102010935 histone-binding protein RBBP4 pseudogene NW_004955515 5132224 5133419 - 102010935 AGCD01067339 MODEL 8932614 protein-coding Hoxa2 homeobox A2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain segmentation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH Congenital Microtia (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN nucleus (ortholog) NW_004955410 28794878 28798231 - 102029598 AGCD01011259;GBDK01144344;XM_005377445 XP_005377502 MODEL 9024007 pseudo LOC102008985 60S ribosomal protein L32 pseudogene NW_004955437 1108077 1108584 + 102008985 AGCD01034190 MODEL 8745670 protein-coding Ptk7 protein tyrosine kinase 7 (inactive) ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axis elongation (ortholog); cell migration (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955437 9037933 9094237 + 102019323 AGCD01034515;GBDK01100991;XM_005390133;XM_013516906 XP_005390190;XP_013372360 MODEL 8702353 ncrna LOC102012107 uncharacterized LOC102012107 NW_004955504 1489501 1499030 + 102012107 AGCD01064841;GBDI01349444;XR_264287 MODEL 10293609 ncrna LOC106149301 uncharacterized LOC106149301 NW_004955442 16120598 16128072 + 106149301 AGCD01037891;GBDF01013789;XR_001235375 MODEL 39132175 rrna 5S_rRNA 5S ribosomal RNA 8744522 protein-coding Nanos2 nanos C2HC-type zinc finger 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); mRNA binding (ortholog); INVOLVED IN germ-line stem cell population maintenance (ortholog); mRNA catabolic process (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); P-body (ortholog) NW_004955574 333007 333529 - 102024065 AGCD01075098;GBDF01296079;XM_005413823 XP_005413880 MODEL 8881247 protein-coding LOC102010146 uncharacterized LOC102010146 NW_004955471 567077 785143 + 102010146 AGCD01052962;AGCD01052963;AGCD01052964;AGCD01052965;XM_013522863 XP_013378317 MODEL 8928041 pseudo LOC102013629 elongation factor 1-alpha 1-like NW_004955503 7106308 7167094 + 102013629 AGCD01064779;AGCD01064780;AGCD01064781;AGCD01064782;AGCD01064783 MODEL 8955478 pseudo LOC102024591 dnaJ homolog subfamily C member 10 pseudogene NW_004955500 7129982 7156228 - 102024591 AGCD01063901;AGCD01063902 MODEL 8709129 protein-coding Wdr89 WD repeat domain 89 INVOLVED IN corpus callosum development (ortholog); ventricular system development (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955466 6171553 6204818 + 102007319 AGCD01050912;AGCD01050913;AGCD01050914;GBDF01276584;XM_005399148;XM_005399149;XM_005399150;XM_005399151;XM_013522006;XM_013522007 XP_005399205;XP_005399206;XP_005399207;XP_005399208;XP_013377460;XP_013377461 MODEL 39132393 snrna U6 U6 spliceosomal RNA 39134099 misc_rna 7SK 7SK RNA 8748192 pseudo LOC102007514 COMM domain-containing protein 1-like NW_004955407 20893031 20899078 - 102007514 AGCD01007345 MODEL 8720242 protein-coding Hgd homogentisate 1,2-dioxygenase ENCODES a protein that exhibits homogentisate 1,2-dioxygenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); L-tyrosine catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH alkaptonuria (ortholog); Alkaptonuric Ochronosis (ortholog); Arthralgia (ortholog) NW_004955427 20141522 20188700 - 102025268 AGCD01027394;GBDJ01267025;XM_005386468 XP_005386525 MODEL 8739383 ncrna LOC102007895 uncharacterized LOC102007895 NW_004955482 3978633 3990270 + 102007895 AGCD01057276;AGCD01057277;GBDI01191861;XR_263829 MODEL 39131621 rrna 5S_rRNA 5S ribosomal RNA 39134397 misc_rna 7SK 7SK RNA 9035015 pseudo LOC102025316 cyclic AMP-dependent transcription factor ATF-2 pseudogene NW_004955404 32070084 32076574 + 102025316 AGCD01004032 MODEL 8707093 ncrna LOC102003597 uncharacterized LOC102003597 NW_004955447 15301309 15312329 + 102003597 AGCD01041045;GBDF01277712;XR_262434 MODEL 8854865 pseudo LOC102022860 speckle-type POZ protein pseudogene NW_004955546 45090 45765 + 102022860 AGCD01071945 MODEL 8922029 protein-coding CUNH1orf52 chromosome unknown C1orf52 homolog ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955423 8728976 8735511 + 102025376 AGCD01023635;GBDJ01349232;XM_005385140 XP_005385197 MODEL 8789255 protein-coding Irf9 interferon regulatory factor 9 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH acute pancreatitis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); ISGF3 complex (ortholog); nucleus (ortholog) NW_004955409 36233633 36239916 - 102011183 AGCD01010453;AGCD01010454;GBCQ01062904;XM_005377043 XP_005377100 MODEL 8789045 protein-coding Gpr132 G protein-coupled receptor 132 INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autoimmune disease (ortholog); Breast Cancer, Familial (ortholog) NW_004955538 3366333 3382778 - 102003379 AGCD01071162;GBDK01219635;XM_005410854;XM_013507894;XM_013507895 XP_005410911;XP_013363348;XP_013363349 MODEL 8980889 protein-coding Nvl nuclear VCP like ENCODES a protein that exhibits ATP binding (ortholog); preribosome binding (ortholog); INVOLVED IN positive regulation of telomere maintenance (ortholog); regulation of protein localization to nucleolus (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955520 1010966 1069176 + 102009098 AGCD01068040;AGCD01068041;AGCD01068042;GBDF01159294;XM_005409226 XP_005409283 MODEL 8789286 pseudo LOC102012529 nicotinamide phosphoribosyltransferase-like NW_004955414 15004805 15007553 + 102012529 AGCD01015167 MODEL 8901559 ncrna LOC102023217 uncharacterized LOC102023217 NW_004955403 23531392 23541660 - 102023217 AGCD01002248;GBDJ01026736;XR_259199 MODEL 8941599 protein-coding Snx5 sorting nexin 5 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); dynactin binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN endosome membrane tubulation (ortholog); epidermal growth factor catabolic process (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN brush border (ortholog); cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955415 26786836 26805762 - 102012316 AGCD01016607;AGCD01016608;GBCB01019926;GBDK01008760;XM_005380914 XP_005380971 MODEL 8729318 protein-coding Bbs4 Bardet-Biedl syndrome 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); dynactin binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adult behavior (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); centriole (ortholog) NW_004955450 4624634 4668470 - 102027595 AGCD01042470;AGCD01042471;AGCD01042472;AGCD01042473;AGCD01042474;GBDJ01314473;XM_013518828 XP_013374282 MODEL 9042372 pseudo LOC102004984 60S ribosomal protein L7 pseudogene NW_004955443 10336436 10337202 - 102004984 AGCD01038376 MODEL 9048651 protein-coding Plekho2 pleckstrin homology domain containing O2 INVOLVED IN macrophage apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); carotid stenosis (ortholog); colorectal cancer (ortholog) NW_004955450 10692305 10714031 - 102015262 AGCD01042632;GBCE01154962;XM_005393747 XP_005393804 MODEL 8938040 ncrna LOC102006020 uncharacterized LOC102006020 NW_004955414 22872844 22875573 - 102006020 AGCD01015483;GBCQ01017796;XR_260188 MODEL 8709157 protein-coding Asxl2 ASXL transcriptional regulator 2 ENCODES a protein that exhibits chromatin binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN adult heart development (ortholog); embryonic skeletal system morphogenesis (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955469 7786030 7923739 - 102007881 AGCD01052432;AGCD01052433;AGCD01052434;AGCD01052435;AGCD01052436;AGCD01052437;AGCD01052438;GBDJ01018939;XM_005400412;XM_005400413;XM_005400414;XM_013522575 XP_005400469;XP_005400470;XP_005400471;XP_013378029 MODEL 9007281 protein-coding Sft2d2 SFT2 domain containing 2 ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955462 8878387 8897523 - 102018369 AGCD01049329;AGCD01049330;AGCD01049331;GBDK01080878;XM_005398208 XP_005398265 MODEL 8707995 protein-coding LOC102018173 protein SPT2 homolog NW_004955412 18553976 18555107 + 102018173 AGCD01012944;AGCD01012945;GBDF01021744;XM_013510975 XP_013366429 MODEL 8957493 protein-coding Wdr90 WD repeat domain 90 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955442 16534951 16552856 - 102020724 AGCD01037901;GBDF01080193;XM_005391622;XM_013517761;XM_013517762;XR_001235382 XP_005391679;XP_013373215;XP_013373216 MODEL 9046449 protein-coding Ctbs chitobiase ENCODES a protein that exhibits chitinase activity (ortholog); hydrolase activity, acting on glycosyl bonds (ortholog); INVOLVED IN carbohydrate catabolic process (ortholog); chitin catabolic process (ortholog); oligosaccharide catabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN lysosome (ortholog) NW_004955423 9327945 9343923 + 102030437 AGCD01023657;GBDJ01274029;XM_005385159 XP_005385216 MODEL 8846038 protein-coding Fance FA complementation group E INVOLVED IN cell maturation (ortholog); gene expression (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nuclear periphery (ortholog) NW_004955437 3369127 3382072 + 102026153 AGCD01034309;AGCD01034310;GBDF01158519;XM_005389553;XM_005389556 XP_005389610;XP_005389613 MODEL 8701572 protein-coding Mydgf myeloid derived growth factor INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); Keloid (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); extracellular region (ortholog) NW_004955495 4320532 4330921 + 102006043 AGCD01061912;AGCD01061913;AGCD01061914;GBDF01000136;XM_005405787;XM_005405788 XP_005405844;XP_005405845 MODEL 8806987 protein-coding Asxl3 ASXL transcriptional regulator 3 INVOLVED IN negative regulation of lipid biosynthetic process (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); allergic disease (ortholog); allergic rhinitis (ortholog) NW_004955402 20571209 20704480 + 102024293 AGCD01000578;AGCD01000579;GBDF01014157;XM_005372763;XM_005372764;XM_005372765;XM_013507996;XM_013508021 XP_005372820;XP_005372821;XP_005372822;XP_013363450;XP_013363475 MODEL 8895440 protein-coding Galnt7 polypeptide N-acetylgalactosaminyltransferase 7 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955403 33665004 33729891 - 102011074 AGCD01002460;AGCD01002461;AGCD01002462;AGCD01002463;AGCD01002464;GBDI01225802;XM_013513311;XM_013513313 XP_013368765;XP_013368767 MODEL 8748109 protein-coding LOC102003218 dimethylaniline monooxygenase [N-oxide-forming] 5-like NW_004955462 10184547 10214181 - 102003218 AGCD01049355;AGCD01049356;AGCD01049357;XM_005398324 XP_005398381 MODEL 8700369 protein-coding Tsga13 testis specific 13 ASSOCIATED WITH pheochromocytoma/paraganglioma syndrome 1 (ortholog); urinary bladder cancer (ortholog) NW_004955410 36964398 36982042 + 102009259 AGCD01011441;AGCD01011442;GBDF01010268;XM_005377551;XM_005377552;XM_005377553;XM_013510641 XP_005377608;XP_005377609;XP_005377610;XP_013366095 MODEL 8762681 protein-coding LOC102005330 uncharacterized LOC102005330 NW_004955637 38088 43799 + 102005330 AGCD01077644;AGCD01077645;XM_005415045 XP_005415102 MODEL 10156556 protein-coding Ptma prothymosin alpha ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenoma (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955453 4036503 4037788 - 106149798 AGCD01044672;GBBH01002333;GBDF01000055;XM_013519995 XP_013375449 MODEL 9058441 protein-coding Nanos3 nanos C2HC-type zinc finger 3 ENCODES a protein that exhibits enzyme activator activity (ortholog); RNA binding (ortholog); INVOLVED IN germ cell development (ortholog); mRNA destabilization (ortholog); negative regulation of apoptotic signaling pathway (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955415 32648455 32651909 + 102006344 AGCD01016730;GBDF01089189;XM_005381069 XP_005381126 MODEL 8879122 protein-coding CUNH1orf53 chromosome unknown C1orf53 homolog ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 34333868 34339032 + 102026290 AGCD01006501;GBDF01118909;XM_005375123;XM_013521898 XP_005375180;XP_013377352 MODEL 8935476 pseudo LOC102023592 zinc finger CCCH domain-containing protein 15 pseudogene NW_004955479 9466239 9467106 + 102023592 AGCD01056471 MODEL 8930574 protein-coding LOC102012115 retinal dehydrogenase 1-like NW_004955512 5973700 6028923 - 102012115 AGCD01066790;AGCD01066791;AGCD01066792;AGCD01066793;AGCD01066794;AGCD01066795;AGCD01066796;AGCD01066797;AGCD01066798;AGCD01066799;AGCD01066800;AGCD01066801;GBCQ01010585;GBDK01002218;XM_013506549 XP_013362003 MODEL 9055836 protein-coding Bmp6 bone morphogenetic protein 6 ENCODES a protein that exhibits BMP receptor binding (ortholog); cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); adult T-cell leukemia/lymphoma (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog); vesicle (ortholog) NW_004955465 6053600 6201254 - 102020895 AGCD01050437;AGCD01050438;GBCE01031404;GBCQ01095928;XM_013521839 XP_013377293 MODEL 8901800 pseudo LOC102007517 swi5-dependent recombination DNA repair protein 1 homolog pseudogene NW_004955408 24197900 24198617 + 102007517 AGCD01008599 MODEL 8753374 protein-coding Snx6 sorting nexin 6 ENCODES a protein that exhibits dynactin binding (ortholog); protein homodimerization activity (ortholog); type I transforming growth factor beta receptor binding (ortholog); INVOLVED IN cellular response to amyloid-beta (ortholog); cellular response to epidermal growth factor stimulus (ortholog); intracellular protein transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955409 26323940 26353675 + 102006748 AGCD01010173;AGCD01010174;AGCD01010175;AGCD01010176;GBCQ01034883;GBDK01020668;XM_005376940 XP_005376997 MODEL 39132394 snrna U6 U6 spliceosomal RNA 8893271 pseudo LOC102021527 olfactory receptor 6C65-like NW_004955458 2783468 2787627 + 102021527 AGCD01047243 MODEL 9031716 pseudo LOC102006021 calcyclin-binding protein pseudogene NW_004955470 12066013 12067427 + 102006021 AGCD01052919 MODEL 10265514 ncrna LOC106147155 uncharacterized LOC106147155 NW_004955523 389441 393531 - 106147155 AGCD01068453;GBDI01278963;XR_001231925 MODEL 8881814 ncrna LOC102006395 uncharacterized LOC102006395 NW_004955440 17375532 17384121 + 102006395 AGCD01036569;GBDF01080603;XR_262034 MODEL 10104730 protein-coding Defb135 defensin beta 135 ASSOCIATED WITH lymphoma (ortholog); thoracic aortic aneurysm (ortholog) NW_004955403 53199675 53211089 + 106148662 AGCD01003043;GBDF01267137;XM_013514932 XP_013370386 MODEL 8907712 protein-coding Gmnc geminin coiled-coil domain containing ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); DNA replication (ortholog) NW_004955420 17286789 17297574 + 102014363 AGCD01021021;GBBH01168023;XM_005383221 XP_005383278 MODEL 8777601 pseudo LOC102008986 transcription elongation factor A N-terminal and central domain-containing protein-like NW_004955438 5285314 5286378 - 102008986 AGCD01035064 MODEL 10079123 ncrna LOC106149302 uncharacterized LOC106149302 NW_004955442 260678 269198 - 106149302 AGCD01037417;AGCD01037418;AGCD01037419;GBCQ01087818;XR_001235379 MODEL 8857191 pseudo LOC102023222 calcineurin B homologous protein 1 pseudogene NW_004955452 13533225 13536269 + 102023222 AGCD01044421 MODEL 8807323 protein-coding Flt1 fms related receptor tyrosine kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel morphogenesis (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN axitinib pharmacodynamics pathway; bevacizumab pharmacodynamics pathway; glypican signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955497 7653309 7831737 - 102006932 AGCD01062681;AGCD01062682;GBDK01093188;XM_005406358;XM_005406359;XM_005406360 XP_005406415;XP_005406416;XP_005406417 MODEL 8749563 protein-coding Dazl deleted in azoospermia like ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR binding (ortholog); translation activator activity (ortholog); INVOLVED IN female meiosis II (ortholog); germ cell development (ortholog); oocyte maturation (ortholog); ASSOCIATED WITH azoospermia (ortholog); stomach cancer (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955430 8869419 8880782 - 102005622 AGCD01029396;GBDF01043369;XM_013515564 XP_013371018 MODEL 39134100 misc_rna 7SK 7SK RNA 8957602 protein-coding LOC102024592 tubulin polymerization-promoting protein NW_004955504 341155 416050 - 102024592 AGCD01064817;AGCD01064818;AGCD01064819;GBBH01000645;XM_005407009;XM_005407010;XM_013505871;XM_013505872;XM_013505873;XM_013505874;XM_013505875;XM_013505876;XM_013505877;XM_013505878;XM_013505879;XM_013505880;XM_013505881;XM_013505882;XM_013505883;XM_013505884;XM_013505885;XM_013505886 XP_005407066;XP_005407067;XP_013361325;XP_013361326;XP_013361327;XP_013361328;XP_013361329;XP_013361330;XP_013361331;XP_013361332;XP_013361333;XP_013361334;XP_013361335;XP_013361336;XP_013361337;XP_013361338;XP_013361339;XP_013361340 MODEL 8980830 protein-coding Plekhs1 pleckstrin homology domain containing S1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955431 18745990 18798517 + 102008969 AGCD01030434;AGCD01030435;GBDI01020069;XM_005387803;XM_013515824;XM_013515825;XM_013515826;XM_013515828;XM_013515829;XM_013515830;XM_013515831;XR_001234618;XR_001234619;XR_001234620;XR_001234621 XP_005387860;XP_013371278;XP_013371279;XP_013371280;XP_013371282;XP_013371283;XP_013371284;XP_013371285 MODEL 39131622 rrna 5S_rRNA 5S ribosomal RNA 39134398 misc_rna 7SK 7SK RNA 8986116 pseudo LOC102010940 T-complex protein 1 subunit zeta-like NW_004955523 256492 260604 - 102010940 AGCD01068440 MODEL 8931711 ncrna LOC102022862 uncharacterized LOC102022862 NW_004955555 1627996 1630683 + 102022862 AGCD01073092;GBCQ01164340;XR_264966 MODEL 8731632 protein-coding LOC102018178 olfactory receptor 10T2-like NW_004955414 23717094 23718032 + 102018178 AGCD01015518;XM_005380522 XP_005380579 MODEL 8939684 protein-coding Nebl nebulette ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal protein binding (ortholog); filamin binding (ortholog); INVOLVED IN cardiac muscle thin filament assembly (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cardiac arrest (ortholog); FOUND IN cytoplasm (ortholog); stress fiber (ortholog); Z disc (ortholog) NW_004955429 7559994 7730683 + 102020691 AGCD01028597;AGCD01028598;AGCD01028599;AGCD01028600;AGCD01028601;GBDJ01400345;XM_013515481;XM_013515482;XM_013515483;XM_013515484 XP_013370935;XP_013370936;XP_013370937;XP_013370938 MODEL 9047212 protein-coding Hoxa3 homeobox A3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); HMG box domain binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ formation (ortholog); animal organ morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); congenital heart disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955410 28801918 28846605 - 102004147 AGCD01011259;AGCD01011260;AGCD01011261;XM_005377453;XM_005377456;XM_013510610;XM_013510611;XM_013510612;XM_013510613 XP_005377510;XP_005377513;XP_013366064;XP_013366065;XP_013366066;XP_013366067 MODEL 8938454 protein-coding Gpr135 G protein-coupled receptor 135 ENCODES a protein that exhibits arrestin family protein binding (ortholog); ASSOCIATED WITH lung non-small cell carcinoma (ortholog); FOUND IN endosome (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) NW_004955466 13188710 13194054 - 102023130 AGCD01051151;AGCD01051152;GBDF01278355;XM_005399256 XP_005399313 MODEL 8817033 protein-coding Bbs5 Bardet-Biedl syndrome 5 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 5 (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centriolar satellite (ortholog) NW_004955449 5043034 5061806 - 102028919 AGCD01041906;GBDF01089344;XM_005393261;XM_005393262 XP_005393318;XP_005393319 MODEL 8705338 protein-coding Ctc1 CST telomere replication complex component 1 ENCODES a protein that exhibits G-rich strand telomeric DNA binding (ortholog); single-stranded DNA binding (ortholog); telomeric repeat DNA binding (ortholog); INVOLVED IN bone marrow development (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); brain disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); CST complex (ortholog); nucleoplasm (ortholog) NW_004955467 8673069 8700730 + 102021327 AGCD01051466;GBDJ01339470;XM_005399422;XM_005399423;XM_005399425 XP_005399479;XP_005399480;XP_005399482 MODEL 9022097 protein-coding Galnt8 polypeptide N-acetylgalactosaminyltransferase 8 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955413 2510123 2566842 + 102015098 AGCD01013552;AGCD01013553;AGCD01013554;AGCD01013555;XM_005379606 XP_005379663 MODEL 9025248 pseudo LOC102012538 peroxiredoxin-6-like NW_004955482 9359566 9361203 + 102012538 AGCD01057566 MODEL 8999630 protein-coding Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); transposable element silencing (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); spermatogenic failure 57 (ortholog); FOUND IN cytoplasm (ortholog); pi-body (ortholog) NW_004955432 23059462 23119421 - 102016186 AGCD01031274;AGCD01031275;AGCD01031276;GBDF01222043;XM_005388135 XP_005388192 MODEL 8890541 ncrna LOC102013630 uncharacterized LOC102013630 NW_004955504 2770536 2808486 - 102013630 AGCD01064860;AGCD01064861;XR_001231542;XR_264290;XR_264291 MODEL 10251940 ncrna LOC106150095 uncharacterized LOC106150095 NW_004955464 10693138 10729425 - 106150095 AGCD01050127;GBCE01094116;XR_001236701;XR_001236702 MODEL 10133507 protein-coding Defb136 defensin beta 136 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); antifungal innate immune response (ortholog); defense response to Gram-negative bacterium (ortholog); ASSOCIATED WITH thoracic aortic aneurysm (ortholog) NW_004955403 53168733 53170177 - 106148661 AGCD01003039;GBCQ01107685;XM_013514930 XP_013370384 MODEL 9016780 protein-coding Kirrel2 kirre like nephrin family adhesion molecule 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); negative regulation of protein phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN cell-cell junction (ortholog); centriolar satellite (ortholog); plasma membrane (ortholog) NW_004955468 2705131 2712921 - 102016578 AGCD01051834;GBDJ01243401;XM_013522336 XP_013377790 MODEL 8938501 protein-coding Tshb thyroid stimulating hormone subunit beta INVOLVED IN response to calcium ion (ortholog); response to estrogen (ortholog); response to vitamin A (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Coma (ortholog); congenital nongoitrous hypothyroidism 4 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 18316585 18339935 + 102023390 AGCD01033400;AGCD01033401;AGCD01033402;AGCD01033403;GBDF01010175;XM_005389018;XM_005389019;XM_013516550 XP_005389075;XP_005389076;XP_013372004 MODEL 8959937 ncrna LOC102012121 uncharacterized LOC102012121 NW_004955435 13285870 13323570 + 102012121 AGCD01033200;GBDF01292749;XR_001234893;XR_001234894;XR_261685 MODEL 9007606 protein-coding Hgf hepatocyte growth factor ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); cell morphogenesis (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; scatter factor/hepatocyte growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN extracellular region (ortholog) NW_004955410 4114280 4181953 + 102003521 AGCD01010660;AGCD01010661;GBDK01115500;XM_005377192;XM_005377193;XM_013510677;XM_013510678;XM_013510679;XM_013510680;XM_013510681 XP_005377249;XP_005377250;XP_013366131;XP_013366132;XP_013366133;XP_013366134;XP_013366135 MODEL 8731927 protein-coding Sft2d3 SFT2 domain containing 3 NW_004955459 2842452 2845045 - 102026837 AGCD01048003;GBDI01227745;XM_005397594 XP_005397651 MODEL 39132396 snrna U6 U6 spliceosomal RNA 8893968 protein-coding Irgc immunity related GTPase cinema INVOLVED IN positive regulation of flagellated sperm motility (ortholog); FOUND IN lipid droplet (ortholog); sperm flagellum (ortholog); sperm mitochondrial sheath (ortholog) NW_004955555 1442188 1445305 + 102019857 AGCD01073081;XM_005412454 XP_005412511 MODEL 39132177 rrna 5S_rRNA 5S ribosomal RNA 10224400 ncrna LOC106147156 uncharacterized LOC106147156 NW_004955523 441502 444200 - 106147156 AGCD01068457;GBDI01249007;XR_001231926 MODEL 8892160 protein-coding LOC102010149 olfactory receptor 52K2-like NW_004955414 21881188 21882150 - 102010149 AGCD01015436;XM_013511736 XP_013367190 MODEL 8996502 protein-coding Myef2 myelin expression factor 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955409 5713495 5747528 + 102014329 AGCD01009321;AGCD01009322;GBCQ01105159;XM_005376710;XM_005376711;XM_005376712;XM_005376713 XP_005376767;XP_005376768;XP_005376769;XP_005376770 MODEL 8922411 pseudo LOC102003219 calcyclin-binding protein pseudogene NW_004955411 30807769 30808487 + 102003219 AGCD01012264 MODEL 8908668 protein-coding Mmadhc metabolism of cobalamin associated D ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955440 15317877 15338139 - 102026911 AGCD01036489;AGCD01036490;GBCB01006531;XM_005390803;XM_005390804;XM_013517503 XP_005390860;XP_005390861;XP_013372957 MODEL 8963506 protein-coding CUNH1orf54 chromosome unknown C1orf54 homolog INVOLVED IN epithelial cell proliferation involved in renal tubule morphogenesis (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to wounding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955413 496136 505911 - 102016795 AGCD01013472;GBDK01076216;XM_005378692 XP_005378749 MODEL 10239067 ncrna LOC106149303 uncharacterized LOC106149303 NW_004955442 16835629 16843299 + 106149303 AGCD01037917;GBDF01210798;XR_001235380 MODEL 8720398 protein-coding LOC102007896 olfactory receptor 1J1-like NW_004955419 5455988 5456929 + 102007896 AGCD01019810;XM_005382528 XP_005382585 MODEL 8735335 ncrna LOC102025323 uncharacterized LOC102025323 NW_004955456 3093732 3094240 + 102025323 AGCD01046263;XR_262875 MODEL 9029342 protein-coding Bmp7 bone morphogenetic protein 7 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN allantois development (ortholog); anatomical structure formation involved in morphogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Acute Otitis Media (ortholog); atrial heart septal defect 8 (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); vesicle (ortholog) NW_004955445 2154057 2235594 + 102006504 AGCD01039351;GBDK01182189;XM_005392260 XP_005392317 MODEL 39134101 misc_rna 7SK 7SK RNA 8899365 protein-coding LOC102021528 probable C-mannosyltransferase DPY19L2 NW_004955460 5077043 5137707 + 102021528 AGCD01048446;AGCD01048447;AGCD01048448;GBDF01005800;XM_013521261;XM_013521262;XM_013521263 XP_013376715;XP_013376716;XP_013376717 MODEL 8871813 ncrna LOC102024593 uncharacterized LOC102024593 NW_004955427 12460417 12476643 - 102024593 AGCD01027214;AGCD01027215;GBDF01222863;XR_001234408;XR_001234409 MODEL 8904505 protein-coding Fancf FA complementation group F ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); ovarian follicle development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH adenocarcinoma in situ (ortholog); disease of cellular proliferation (ortholog); Fanconi anemia (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) NW_004955476 3067491 3069637 - 102006769 AGCD01055236;AGCD01055237;GBCE01072464;XM_013502919 XP_013358373 MODEL 8979047 protein-coding Plet1 placenta expressed transcript 1 INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); positive regulation of cell migration (ortholog); wound healing, spreading of epidermal cells (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog) NW_004955412 13902940 13912761 - 102030508 AGCD01012847;GBDJ01016895;XM_005378121 XP_005378178 MODEL 8815794 protein-coding Wdr91 WD repeat domain 91 ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); regulation of protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) NW_004955494 7441880 7470174 + 102013426 AGCD01061552;GBDF01015655;XM_005405487;XM_005405488 XP_005405544;XP_005405545 MODEL 8885164 protein-coding Nwd1 NACHT and WD repeat domain containing 1 INVOLVED IN intracellular signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955524 1083237 1122615 - 102028570 AGCD01068735;AGCD01068736;AGCD01068737;GBDF01014862;XM_005409503 XP_005409560 MODEL 9035741 protein-coding Tshr thyroid stimulating hormone receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); protein-containing complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH adenoma (ortholog); Adrenal Gland Neoplasms (ortholog); autoimmune thyroiditis (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955438 4601765 4758922 + 102024276 AGCD01035046;AGCD01035047;AGCD01035048;GBDF01190268;XM_005390231;XM_005390232;XM_005390233;XM_013517232;XM_013517233 XP_005390288;XP_005390289;XP_005390290;XP_013372686;XP_013372687 MODEL 8826871 ncrna LOC102022864 uncharacterized LOC102022864 NW_004955556 43579 59320 - 102022864 AGCD01073158;AGCD01073159;GBDF01042945;XR_001232316;XR_264973 MODEL 8988144 ncrna LOC102005333 uncharacterized LOC102005333 NW_004955452 11263904 11270100 + 102005333 AGCD01044333;GBDJ01321809;XR_001236063;XR_262678 MODEL 8837384 protein-coding LOC102004985 olfactory receptor 7G2-like NW_004955563 363283 413390 - 102004985 AGCD01074063;AGCD01074064;AGCD01074065;AGCD01074066;XM_013509126 XP_013364580 MODEL 9005807 pseudo LOC102023594 thioredoxin-interacting protein pseudogene NW_004955480 6224297 6225462 - 102023594 AGCD01056683;XR_263753 MODEL 8892616 protein-coding Hoxa4 homeobox A4 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nuclear body (ortholog) NW_004955410 28822814 28827294 - 102025884 AGCD01011260;AGCD01011261;GBCQ01176053;GBDF01221263;XM_013510609 XP_013366063 MODEL 9000566 protein-coding Ptms parathymosin ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 4376955 4378253 + 102029065 AGCD01013612;GBCQ01007684;GBDJ01018919;XM_013511349 XP_013366803 MODEL 8738591 protein-coding Gpr137 G protein-coupled receptor 137 ASSOCIATED WITH high grade glioma (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955422 20791144 20795451 - 102016283 AGCD01023087;GBDF01002326;XM_005384621;XM_013514297 XP_005384678;XP_013369751 MODEL 9057980 protein-coding Nanp N-acetylneuraminic acid phosphatase ENCODES a protein that exhibits N-acylneuraminate-9-phosphatase activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); N-acetylneuraminate biosynthetic process (ortholog); N-acetylneuraminate metabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytosol (ortholog) NW_004955415 31453393 31460147 - 102014241 AGCD01016676;GBDJ01030026;XM_005381001;XM_005381002 XP_005381058;XP_005381059 MODEL 8940666 pseudo LOC102003598 SRSF protein kinase 1 pseudogene NW_004955447 5510865 5512873 + 102003598 AGCD01040759 MODEL 8913671 protein-coding Myf5 myogenic factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cartilage condensation (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH OPHTHALMOPLEGIA, EXTERNAL, WITH RIB AND VERTEBRAL ANOMALIES (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955405 19345943 19348453 + 102022456 AGCD01005035;GBCB01125641;XM_005374367 XP_005374424 MODEL 8983021 ncrna LOC102013631 uncharacterized LOC102013631 NW_004955427 18854952 18901498 - 102013631 AGCD01027352;AGCD01027353;AGCD01027354;GBDF01196054;XR_261278;XR_261279;XR_261280 MODEL 8723956 pseudo LOC102007523 NEDD8-conjugating enzyme Ubc12 pseudogene NW_004955409 21637990 21714722 + 102007523 AGCD01009975;AGCD01009976;AGCD01009977;AGCD01009978;XM_005377162 MODEL 8799243 protein-coding Dbf4 DBF4-CDC7 kinase regulatory subunit ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Dbf4-dependent protein kinase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955432 5245039 5266104 + 102017371 AGCD01030770;GBDF01080724;XM_005387976;XM_005387977;XM_013516044 XP_005388033;XP_005388034;XP_013371498 MODEL 39134399 misc_rna 7SK 7SK RNA 9065587 protein-coding LOC102006400 galactoside 2-alpha-L-fucosyltransferase 2-like NW_004955559 1877285 1894905 - 102006400 AGCD01073677;AGCD01073678;GBDF01145381;XM_005412939 XP_005412996 MODEL 8765725 protein-coding LOC102012123 uncharacterized LOC102012123 NW_004955436 1773036 1779567 - 102012123 AGCD01033588;AGCD01033589;GBDF01021603;XM_013516581 XP_013372035 MODEL 8893524 protein-coding LOC102006024 ovomucoid-like NW_004955415 5904647 5909835 - 102006024 AGCD01016002;GBDF01085593;XM_005380639 XP_005380696 MODEL 8908836 protein-coding Flt3 fms related receptor tyrosine kinase 3 ENCODES a protein that exhibits cytokine receptor activity (ortholog); nuclear glucocorticoid receptor binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955497 7357533 7441215 - 102006150 AGCD01062671;AGCD01062672;AGCD01062673;AGCD01062674;GBBH01210557;GBDI01027559;XM_013505445 XP_013360899 MODEL 8716128 ncrna LOC102008990 uncharacterized LOC102008990 NW_004955549 117973 173721 + 102008990 AGCD01072419;GBDF01076042;XR_001232252;XR_264912 MODEL 8927359 ncrna LOC102010941 uncharacterized LOC102010941 NW_004955435 16643784 16657404 - 102010941 AGCD01033336;GBDF01056722;XR_261709 MODEL 39132179 rrna 5S_rRNA 5S ribosomal RNA 8822927 protein-coding LOC102023228 cuticle collagen 1-like NW_004955408 6166588 6168304 - 102023228 AGCD01008164;GBDF01234789;XM_005376169 XP_005376226 MODEL 8878747 protein-coding Necab1 N-terminal EF-hand calcium binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lymphoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955417 7573861 7737920 + 102012647 AGCD01018008;AGCD01018009;AGCD01018010;AGCD01018011;AGCD01018012;AGCD01018013;AGCD01018014;GBDJ01360857;XM_005381766 XP_005381823 MODEL 10064437 ncrna LOC106147158 uncharacterized LOC106147158 NW_004955523 203543 211843 + 106147158 AGCD01068437;GBBH01115508;XR_001231941 MODEL 8931408 ncrna LOC102003223 uncharacterized LOC102003223 NW_004955467 6583158 6595059 - 102003223 AGCD01051417;GBDI01181558;XR_001236858;XR_263342;XR_263343;XR_263344 MODEL 8813340 pseudo LOC102005334 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial pseudogene NW_004955453 2433189 2438637 - 102005334 AGCD01044629 MODEL 8950912 protein-coding Bbs7 Bardet-Biedl syndrome 7 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN brain development (ortholog); eye development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 7 (ortholog); cone-rod dystrophy (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centrosome (ortholog) NW_004955428 18682072 18724560 + 102017686 AGCD01028069;GBDF01123997;XM_005386780;XM_005386781;XM_013515309;XM_013515310 XP_005386837;XP_005386838;XP_013370763;XP_013370764 MODEL 8740188 protein-coding Ctcf CCCTC-binding factor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin insulator sequence binding (ortholog); chromatin loop anchoring activity (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); chromatin looping (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); alveolar rhabdomyosarcoma (ortholog); Anosmia (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) NW_004955484 9041226 9092924 - 102027306 AGCD01058404;AGCD01058405;GBDK01184696;XM_005403639;XM_005403640;XM_013503946;XM_013503947 XP_005403696;XP_005403697;XP_013359400;XP_013359401 MODEL 39131623 rrna 5S_rRNA 5S ribosomal RNA 9010965 protein-coding Kirrel3 kirre like nephrin family adhesion molecule 3 INVOLVED IN glomerulus morphogenesis (ortholog); hemopoiesis (ortholog); hippocampus development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 4 (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic shaft (ortholog) NW_004955412 27428360 27994458 - 102009703 AGCD01013238;AGCD01013239;AGCD01013240;AGCD01013241;AGCD01013242;AGCD01013243;AGCD01013244;AGCD01013245;AGCD01013246;AGCD01013247;GBDJ01264496;XM_005378522;XM_005378523;XM_013511050;XM_013511051 XP_005378579;XP_005378580;XP_013366504;XP_013366505 MODEL 8779405 protein-coding Snx7 sorting nexin 7 INVOLVED IN positive regulation of autophagosome assembly (ortholog); protein transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955435 3481304 3543801 + 102020604 AGCD01032788;AGCD01032789;AGCD01032790;AGCD01032791;GBCB01111236;GBCE01074188;XM_013516541 XP_013371995 MODEL 8771617 pseudo LOC102025325 centrosomal protein of 57 kDa-like NW_004955408 25270112 25367598 + 102025325 AGCD01008636;AGCD01008637;AGCD01008638;AGCD01008639 MODEL 8726626 protein-coding Ptn pleiotrophin ENCODES a protein that exhibits carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to D-galactosamine (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH adrenal carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Body Weight (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955494 5580264 5681848 + 102006927 AGCD01061522;AGCD01061523;GBCE01001843;XM_013505031;XM_013505032 XP_013360485;XP_013360486 MODEL 8739413 protein-coding CUNH1orf87 chromosome unknown C1orf87 homolog ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog) NW_004955423 28893115 28989576 + 102009196 AGCD01024158;AGCD01024159;AGCD01024160;AGCD01024161;AGCD01024162;XM_013514369 XP_013369823 MODEL 39132398 snrna U6 U6 spliceosomal RNA 39134102 misc_rna 7SK 7SK RNA 9051859 protein-coding Gmnn geminin DNA replication inhibitor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); negative regulation of cell cycle (ortholog); negative regulation of DNA replication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955483 2283518 2344982 - 102008223 AGCD01057673;AGCD01057674;GBDJ01215683;XM_005403359;XM_005403360;XM_005403361;XM_005403362;XM_005403363;XM_013503810 XP_005403416;XP_005403417;XP_005403418;XP_005403419;XP_005403420;XP_013359264 MODEL 9007386 protein-coding Myf6 myogenic factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN muscle tissue morphogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy 1 (ortholog); congenital structural myopathy (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955405 19336798 19338610 + 102022155 AGCD01005035;GBCB01006075;XM_005374366 XP_005374423 MODEL 8782074 pseudo LOC102010150 high mobility group protein B1 pseudogene NW_004955415 3445227 3445862 + 102010150 AGCD01015938 MODEL 8759817 protein-coding Irgm immunity related GTPase M ENCODES a protein that exhibits BH3 domain binding (ortholog); CARD domain binding (ortholog); cardiolipin binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); CAMKK-AMPK signaling cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Crohn's disease (ortholog); inflammatory bowel disease (ortholog); FOUND IN autolysosome (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) NW_004955408 2338510 2344566 + 102014746 AGCD01008006;GBDI01011672;XM_005376048;XM_005376049;XM_005376050;XM_013508143;XM_013508144 XP_005376105;XP_005376106;XP_005376107;XP_013363597;XP_013363598 MODEL 8744261 pseudo LOC102012540 ubiquitin carboxyl-terminal hydrolase 28 pseudogene NW_004955485 2178951 2183590 - 102012540 AGCD01058507;XM_005403918 MODEL 9018057 protein-coding Plg plasminogen ENCODES a protein that exhibits apolipoprotein binding (ortholog); endopeptidase activity (ortholog); enzyme binding (ortholog); INVOLVED IN blood coagulation (ortholog); collagen catabolic process (ortholog); extracellular matrix disassembly (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Arterial Thrombosis (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955439 20317814 20366724 + 102011248 AGCD01036109;AGCD01036110;AGCD01036111;GBDI01245139;XM_005390699;XM_005390700 XP_005390756;XP_005390757 MODEL 8821022 pseudo LOC102007900 la-related protein 7-like NW_004955419 25039993 25040565 - 102007900 AGCD01020367 MODEL 8753427 protein-coding Degs1 delta 4-desaturase, sphingolipid 1 ENCODES a protein that exhibits retinol isomerase activity (ortholog); sphingolipid delta-4 desaturase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); myelin maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 18 (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog) NW_004955520 1139568 1143149 - 102010618 AGCD01068044;GBDF01002918;GBDJ01020741;XM_005409229 XP_005409286 MODEL 8860303 protein-coding Gpr137b G protein-coupled receptor 137B INVOLVED IN negative regulation of bone resorption (ortholog); negative regulation of osteoclast differentiation (ortholog); positive regulation of protein localization to lysosome (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955492 3916536 3952330 - 102022304 AGCD01060705;GBCB01036034;GBCQ01032242;XM_005405014 XP_005405071 MODEL 8790365 protein-coding Hoxa5 homeobox A5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bronchiole development (ortholog); cartilage morphogenesis (ortholog); ASSOCIATED WITH Diaphragmatic Hernia (ortholog); head and neck squamous cell carcinoma (ortholog); Mouth Neoplasms (ortholog); FOUND IN nucleus (ortholog) NW_004955410 28835795 28838244 - 102003844 AGCD01011261;GBCB01024836;XM_005377451 XP_005377508 MODEL 8941952 protein-coding Necab2 N-terminal EF-hand calcium binding protein 2 ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); identical protein binding (ortholog); type 5 metabotropic glutamate receptor binding (ortholog); INVOLVED IN negative regulation of G protein-coupled receptor internalization (ortholog); positive regulation of adenosine receptor signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955564 257781 279937 - 102026362 AGCD01074193;AGCD01074194;GBCE01037934;GBDK01095160;XM_013509207;XR_001232384 XP_013364661 MODEL 8959521 protein-coding Sfta2 surfactant associated 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955583 865226 866360 - 102022442 AGCD01075871;GBDK01021573;XM_005414328 XP_005414385 MODEL 8926991 protein-coding LOC102021530 uncharacterized LOC102021530 NW_004955409 2232328 2240671 + 102021530 AGCD01009192;AGCD01009193;GBDI01039009;XM_013510034 XP_013365488 MODEL 9016463 protein-coding Hgfac HGF activator ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); rough endoplasmic reticulum (ortholog) NW_004955514 2155924 2161302 + 102003898 AGCD01067074;GBBH01041775;XM_005408761;XM_005408762 XP_005408818;XP_005408819 MODEL 9021339 protein-coding Fancg FA complementation group G INVOLVED IN DNA damage response (ortholog); mitochondrion organization (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH asthma (ortholog); congenital myopathy 6 (ortholog); Fanconi anemia (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); mitochondrion (ortholog) NW_004955472 1097986 1105836 + 102015101 AGCD01053373;AGCD01053374;GBDI01026280;XM_005401027;XR_263541 XP_005401084 MODEL 10325958 ncrna LOC106150096 uncharacterized LOC106150096 NW_004955464 10783404 10795883 - 106150096 AGCD01050127;GBBH01095879;XR_001236705 MODEL 8824381 protein-coding Atad1 ATPase family AAA domain containing 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN extraction of mislocalized protein from mitochondrial outer membrane (ortholog); learning (ortholog); memory (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH genetic disease (ortholog); hyperekplexia 4 (ortholog); lung cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955425 5118107 5180578 + 102025703 AGCD01025335;GBDF01002165;XM_005385882;XM_005385883;XM_005385884;XM_005385885;XM_013514805;XM_013514806 XP_005385939;XP_005385940;XP_005385941;XP_005385942;XP_013370259;XP_013370260 MODEL 8847762 protein-coding Wdr93 WD repeat domain 93 ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955416 15472866 15527853 - 102026636 AGCD01017332;AGCD01017333;AGCD01017334;AGCD01017335;GBDF01045871;XM_005381546;XM_005381547;XM_013512549;XM_013512550 XP_005381603;XP_005381604;XP_013368003;XP_013368004 MODEL 39131575 protein-coding TSHZ1 teashirt zinc finger homeobox 1 8859311 protein-coding Nwd2 NACHT and WD repeat domain containing 2 ASSOCIATED WITH uterine carcinosarcoma (ortholog); FOUND IN synapse (ortholog) NW_004955443 9631652 9783162 - 102011485 AGCD01038358;AGCD01038359;GBBH01107003;XM_005392014;XM_013518118 XP_005392071;XP_013373572 MODEL 8766447 protein-coding Mmd monocyte to macrophage differentiation associated ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); positive regulation of protein kinase activity (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955451 7221156 7307702 + 102017832 AGCD01043231;AGCD01043232;AGCD01043233;GBDK01359181;XM_005394083;XM_013519306;XM_013519307 XP_005394140;XP_013374760;XP_013374761 MODEL 9030742 ncrna LOC102023595 uncharacterized LOC102023595 NW_004955417 28744265 28772463 - 102023595 AGCD01018584;AGCD01018585;AGCD01018586;GBDF01225899;XR_001233406;XR_260509;XR_260510 MODEL 8740934 ncrna LOC102010158 uncharacterized LOC102010158 NW_004955417 26308543 26333124 + 102010158 AGCD01018505;GBBH01097094;XR_001233384;XR_001233385 MODEL 8868529 protein-coding Gmppa GDP-mannose pyrophosphorylase A ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); mannose-1-phosphate guanylyltransferase (GTP) activity (ortholog); INVOLVED IN cognition (ortholog); GDP-mannose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); ASSOCIATED WITH alacrima, achalasia, and impaired intellectual development syndrome (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN cytoplasm (ortholog); GDP-mannose pyrophosphorylase complex (ortholog) NW_004955453 13967118 13974351 - 102003939 AGCD01044855;GBDJ01418744;XM_005395516;XM_005395517;XM_005395518;XM_005395520;XM_005395521 XP_005395573;XP_005395574;XP_005395575;XP_005395577;XP_005395578 MODEL 10393518 ncrna LOC106149304 uncharacterized LOC106149304 NW_004955442 16523649 16524803 + 106149304 AGCD01037901;GBDF01057613;XR_001235381 MODEL 8986901 protein-coding Nans N-acetylneuraminate synthase ENCODES a protein that exhibits N-acylneuraminate-9-phosphate synthase activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); N-acetylneuraminate biosynthetic process (ortholog); N-acetylneuraminate metabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH bone development disease (ortholog); Developmental Disabilities (ortholog); nephronophthisis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955419 27424648 27449058 - 102009843 AGCD01020434;AGCD01020435;AGCD01020436;AGCD01020437;GBBH01062991;GBDF01195204;XM_013513284 XP_013368738 MODEL 8758607 pseudo LOC102024594 kinesin-associated protein 3 pseudogene NW_004955427 21459739 21461843 - 102024594 AGCD01027445 MODEL 8821720 protein-coding Ctcfl CCCTC-binding factor like ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone binding (ortholog); INVOLVED IN establishment of protein localization to chromatin (ortholog); genomic imprinting (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955445 1944845 1969502 + 102003913 AGCD01039347;GBDF01278023;XM_005392251;XM_005392252 XP_005392308;XP_005392309 MODEL 8974532 protein-coding Plgrkt plasminogen receptor with a C-terminal lysine INVOLVED IN positive regulation of plasminogen activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) NW_004955434 9424793 9468055 - 102030660 AGCD01032301;AGCD01032302;AGCD01032303;GBDJ01355387;XM_005388659 XP_005388716 MODEL 8962039 pseudo LOC102013635 ornithine aminotransferase, mitochondrial pseudogene NW_004955428 10060530 10066301 + 102013635 AGCD01027854 MODEL 8787014 ncrna LOC102007524 uncharacterized LOC102007524 NW_004955462 7283476 7285145 - 102007524 AGCD01049299;GBDF01181580;XR_263102 MODEL 39134400 misc_rna 7SK 7SK RNA 8762046 ncrna LOC102007901 uncharacterized LOC102007901 NW_004955485 9441277 9448021 + 102007901 AGCD01058766;GBDF01017147;XR_263934;XR_263935 MODEL 8889468 protein-coding LOC102006403 cytochrome P450 3A9-like NW_004955573 1105990 1253925 - 102006403 AGCD01075020;AGCD01075021;AGCD01075022;AGCD01075023;AGCD01075024;AGCD01075025;AGCD01075026;AGCD01075027;AGCD01075028;AGCD01075029;AGCD01075030;AGCD01075031;AGCD01075032;AGCD01075033;AGCD01075034;GBDJ01045815;XM_005413765;XM_005413766;XM_005413767;XM_005413768 XP_005413822;XP_005413823;XP_005413824;XP_005413825 MODEL 9003502 ncrna LOC102025326 uncharacterized LOC102025326 NW_004955409 8371307 8391398 + 102025326 AGCD01009402;AGCD01009403;AGCD01009404;AGCD01009405;AGCD01009406;GBDF01190789;XR_001232688;XR_259758 MODEL 9019577 protein-coding Galnt9 polypeptide N-acetylgalactosaminyltransferase 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955482 564234 614630 + 102021971 AGCD01057177;AGCD01057178;AGCD01057179;GBDJ01379442;XM_005402959;XM_013503535 XP_005403016;XP_013358989 MODEL 8749858 protein-coding CUNH20orf141 chromosome unknown C20orf141 homolog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955415 13770300 13771257 + 102018282 AGCD01016268;GBDF01048459;XM_005380764 XP_005380821 MODEL 8859400 protein-coding LOC102012132 keratin, type II cytoskeletal 72 NW_004955547 2991156 3005189 - 102012132 AGCD01072303;XM_005411950 XP_005412007 MODEL 39132399 snrna U6 U6 spliceosomal RNA 8748119 protein-coding Hoxa6 homeobox A6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955410 28839924 28844328 - 102003522 AGCD01011261;GBCB01024856;XM_005377450 XP_005377507 MODEL 8976850 ncrna LOC102008991 uncharacterized LOC102008991 NW_004955551 215613 228844 - 102008991 AGCD01072651;GBDF01122997;XR_001232270;XR_001232271;XR_001232272;XR_001232273 MODEL 9020565 ncrna LOC102004986 uncharacterized LOC102004986 NW_004955445 2051400 2053337 + 102004986 AGCD01039349;GBDF01234218;XR_262295 MODEL 9057000 pseudo LOC102010942 2-hydroxyacylsphingosine 1-beta-galactosyltransferase pseudogene NW_004955526 532505 539029 - 102010942 AGCD01069240 MODEL 39132180 rrna 5S_rRNA 5S ribosomal RNA 8714362 pseudo LOC102023232 transcription termination factor 1, mitochondrial-like NW_004955458 5088372 5089612 + 102023232 AGCD01047452 MODEL 8862508 ncrna LOC102018180 uncharacterized LOC102018180 NW_004955416 11264103 11270327 - 102018180 AGCD01017181;GBDF01051838;XR_001233298 MODEL 8861275 pseudo LOC102003599 ubiquitin-like protein ATG12 pseudogene NW_004955448 10940263 10942006 + 102003599 AGCD01041506 MODEL 8996352 pseudo LOC102005336 60S ribosomal protein L12-like NW_004955406 7460294 7460841 + 102005336 AGCD01005771 MODEL 10152498 protein-coding LOC106147159 cartilage oligomeric matrix protein-like NW_004955524 2877761 2878420 + 106147159 AGCD01068842;GBBH01184703;XM_013507184 XP_013362638 MODEL 8823269 protein-coding Bmpr1a bone morphogenetic protein receptor type 1A ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); anti-Mullerian hormone receptor signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955510 5812571 5936312 + 102011346 AGCD01066293;AGCD01066294;AGCD01066295;AGCD01066296;AGCD01066297;GBBH01207322;GBBH01207324;XM_005407907 XP_005407964 MODEL 39131624 rrna 5S_rRNA 5S ribosomal RNA 8861245 protein-coding Gpr137c G protein-coupled receptor 137C ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955409 10533840 10592130 - 102028062 AGCD01009475;AGCD01009476;AGCD01009477;GBCB01051838;GBCQ01114426;XM_013510458 XP_013365912 MODEL 9055363 ncrna LOC102022866 uncharacterized LOC102022866 NW_004955447 13365498 13374695 - 102022866 AGCD01040969;GBDF01190773;XR_262424 MODEL 8863543 ncrna LOC102024595 uncharacterized LOC102024595 NW_004955428 4794656 4795986 - 102024595 AGCD01027700;GBDF01264382;XR_261295 MODEL 9057948 ncrna LOC102012541 uncharacterized LOC102012541 NW_004955420 22215125 22224734 - 102012541 AGCD01021189;GBDJ01422894;XR_260735 MODEL 8845035 protein-coding Irgq immunity related GTPase Q ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); substrate localization to autophagosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); prostate cancer (ortholog); FOUND IN autophagosome (ortholog); lysosome (ortholog) NW_004955555 1328187 1335018 - 102016756 AGCD01073072;AGCD01073073;AGCD01073074;GBBH01082357;GBCE01069731;XM_013508749;XM_013508751 XP_013364203;XP_013364205 MODEL 8801040 protein-coding Fanci FA complementation group I ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); DNA repair complex (ortholog); nucleoplasm (ortholog) NW_004955416 15788812 15857933 - 102003021 AGCD01017343;AGCD01017344;AGCD01017345;AGCD01017346;GBDF01155238;XM_005381555;XM_013512604 XP_005381612;XP_013368058 MODEL 8752149 protein-coding LOC102003224 olfactory receptor 151-like NW_004955412 25576967 25577911 + 102003224 AGCD01013160;XM_005378654 XP_005378711 MODEL 8953472 protein-coding Nxf1 nuclear RNA export factor 1 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); poly(A)+ mRNA export from nucleus (ortholog); RNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog); nuclear inclusion body (ortholog) NW_004955599 439773 450834 + 102006848 AGCD01076648;GBDF01080176;XM_005414762;XM_013510040 XP_005414819;XP_013365494 MODEL 8700055 ncrna LOC102023600 uncharacterized LOC102023600 NW_004955483 8636126 8641695 + 102023600 AGCD01057841;GBCB01042012;XR_263871;XR_263873 MODEL 9055897 protein-coding Snx8 sorting nexin 8 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN early endosome membrane (ortholog); retromer complex (ortholog) NW_004955460 9689654 9743891 - 102023782 AGCD01048548;AGCD01048549;GBCE01097252;XM_005397825;XM_013521218 XP_005397882;XP_013376672 MODEL 9044391 pseudo LOC102010159 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like NW_004955417 3869752 3882123 - 102010159 AGCD01017930;AGCD01017931 MODEL 8850916 ncrna LOC102018185 uncharacterized LOC102018185 NW_004955481 6299681 6301761 - 102018185 AGCD01057023;GBCE01032788;XR_263784 MODEL 8721581 protein-coding Ptov1 PTOV1 extended AT-hook containing adaptor protein ASSOCIATED WITH cervical cancer (ortholog); Disease Progression (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955559 1070856 1079052 - 102029454 AGCD01073628;AGCD01073629;GBDK01007823;GBDK01196056;XM_013508969 XP_013364423 MODEL 39134103 misc_rna 7SK 7SK RNA 8816920 pseudo LOC102021531 zinc finger CCHC-type and RNA-binding motif-containing protein 1-like NW_004955460 10685107 10694650 + 102021531 AGCD01048600 MODEL 8887928 pseudo LOC102007526 actin-related protein 10 pseudogene NW_004955463 6222350 6224556 + 102007526 AGCD01049659 MODEL 8910985 protein-coding Plin1 perilipin 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cellular response to cold (ortholog); lipid catabolic process (ortholog); negative regulation of lipid catabolic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); diabetes mellitus (ortholog); familial partial lipodystrophy (ortholog); FOUND IN cell periphery (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955416 15538309 15549275 + 102026001 AGCD01017335;GBDI01016533;XM_013512551;XM_013512552 XP_013368005;XP_013368006 MODEL 8753030 pseudo LOC102013636 S-phase kinase-associated protein 1 pseudogene NW_004955509 3838009 3838505 + 102013636 AGCD01066036 MODEL 8731185 protein-coding Sftpb surfactant protein B INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955424 1849313 1858087 + 102025136 AGCD01024248;GBDK01014342;XM_005385414;XM_005385415;XM_005385416;XM_005385417 XP_005385471;XP_005385472;XP_005385473;XP_005385474 MODEL 9031348 protein-coding Myg1 MYG1 exonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN locomotory exploration behavior (ortholog); mitochondrial RNA metabolic process (ortholog); mRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955458 560033 567102 + 102018804 AGCD01047134;GBDF01052461;XM_005397170 XP_005397227 MODEL 10347570 pseudo LOC106150097 diphosphoinositol polyphosphate phosphohydrolase 2 pseudogene NW_004955464 181925 184495 + 106150097 AGCD01049928 MODEL 9023398 protein-coding Bbs9 Bardet-Biedl syndrome 9 INVOLVED IN cilium assembly (ortholog); fat cell differentiation (ortholog); protein localization to cilium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); ciliary membrane (ortholog) NW_004955582 222926 628514 + 102007287 AGCD01075751;AGCD01075752;AGCD01075753;AGCD01075754;AGCD01075755;AGCD01075756;AGCD01075757;AGCD01075758;AGCD01075759;AGCD01075760;AGCD01075761;AGCD01075762;AGCD01075763;AGCD01075764;AGCD01075765;AGCD01075766;AGCD01075767;AGCD01075768;AGCD01075769;AGCD01075770;GBCE01018725;GBDF01162296;XM_013509769 XP_013365223 MODEL 8984599 protein-coding Galntl5 polypeptide N-acetylgalactosaminyltransferase like 5 ENCODES a protein that exhibits glycosyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); spermatid development (ortholog); ASSOCIATED WITH male infertility (ortholog); sarcoma (ortholog); skin disease (ortholog) NW_004955491 6159609 6189765 + 102010062 AGCD01060517;AGCD01060518;GBDF01048247;XM_005404836;XM_005404837;XM_005404838;XM_005404839;XM_005404840;XM_005404841;XM_005404842;XM_005404843 XP_005404893;XP_005404894;XP_005404895;XP_005404896;XP_005404897;XP_005404898;XP_005404899;XP_005404900 MODEL 8757974 protein-coding Atad2 ATPase family AAA domain containing 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955540 2166708 2228077 - 102030567 AGCD01071316;GBCQ01151375;XM_005410928;XM_013507927 XP_005410985;XP_013363381 MODEL 8983601 protein-coding Hoxa7 homeobox A7 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 28848029 28851069 - 102003003 AGCD01011261;AGCD01011262;GBCB01024844;XM_005377448;XM_005377449 XP_005377505;XP_005377506 MODEL 8781192 protein-coding LOC102004988 boophilin-H2-like NW_004955445 11800937 11812508 - 102004988 AGCD01039717;GBCE01062671;XM_005392424 XP_005392481 MODEL 9002445 protein-coding Tshz1 teashirt zinc finger homeobox 1 INVOLVED IN anterior/posterior pattern specification (ortholog); middle ear morphogenesis (ortholog); soft palate development (ortholog); ASSOCIATED WITH Congenital Aural Atresia (ortholog); Familial Prostate Cancer (ortholog); intellectual disability (ortholog) NW_004955402 58695150 58717926 + 102015164 AGCD01001539;GBDK01397330;XM_013511962 XP_013367416 MODEL 8916617 ncrna LOC102012543 uncharacterized LOC102012543 NW_004955421 4876441 4882855 + 102012543 AGCD01021704;GBCQ01090963;XR_001233851 MODEL 8887927 pseudo LOC102006025 copine-8 pseudogene NW_004955474 8226314 8227620 + 102006025 AGCD01054546 MODEL 8957970 protein-coding LOC102010953 olfactory receptor 5-like NW_004955567 192924 193868 - 102010953 AGCD01074386;XM_005413283 XP_005413340 MODEL 8749806 protein-coding Gmppb GDP-mannose pyrophosphorylase B ENCODES a protein that exhibits mannose-1-phosphate guanylyltransferase (GTP) activity (ortholog); INVOLVED IN GDP-mannose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH amblyopia (ortholog); autistic disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2T (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GDP-mannose pyrophosphorylase complex (ortholog) NW_004955532 1622605 1624900 - 102015564 AGCD01070196;GBCE01117634;XM_005410207 XP_005410264 MODEL 9008896 protein-coding Kiss1 KiSS-1 metastasis suppressor ENCODES a protein that exhibits kisspeptin receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN decidualization (ortholog); G protein-coupled receptor signaling pathway (ortholog); generation of ovulation cycle rhythm (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Delayed Puberty (ortholog); disorder of sexual development (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955406 40043139 40045973 - 102018891 AGCD01006652;GBCQ01059228;XM_005375288 XP_005375345 MODEL 8773867 protein-coding Degs2 delta 4-desaturase, sphingolipid 2 ENCODES a protein that exhibits sphingolipid C4-monooxygenase activity (ortholog); sphingolipid delta-4 desaturase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); sphinganine metabolic process (ortholog); sphingolipid biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955438 21300118 21313330 - 102005417 AGCD01035532;GBCQ01124650;XM_005390429 XP_005390486 MODEL 8761020 protein-coding Necab3 N-terminal EF-hand calcium binding protein 3 INVOLVED IN regulation of amyloid precursor protein biosynthetic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955422 27644913 27660538 + 102003462 AGCD01023331;GBCB01085847;GBDJ01171994;XM_013514323;XM_013514324 XP_013369777;XP_013369778 MODEL 9066928 protein-coding LOC102007904 C-C chemokine receptor type 1-like NW_004955420 25908976 25909943 + 102007904 AGCD01021382;XM_013513596 XP_013369050 MODEL 8961186 pseudo LOC102006405 lupus La protein homolog pseudogene NW_004955449 5976871 5978023 + 102006405 AGCD01041946 MODEL 8958452 ncrna LOC102010160 uncharacterized LOC102010160 NW_004955481 5183643 5195662 + 102010160 AGCD01056965;GBDF01117312;XR_263780;XR_263781 MODEL 8795922 protein-coding Hgh1 HGH1 cochaperone ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955454 2788014 2790902 + 102026289 AGCD01045035;GBBH01149832;XM_005395858 XP_005395915 MODEL 8897517 protein-coding Ptp4a1 protein tyrosine phosphatase 4A1 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); early endosome (ortholog) NW_004955502 322827 329226 - 102023377 AGCD01064234;GBDK01070331;XM_005406875 XP_005406932 MODEL 8707955 protein-coding Flt3lg fms related receptor tyrosine kinase 3 ligand ENCODES a protein that exhibits identical protein binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); dendritic cell differentiation (ortholog); embryonic hemopoiesis (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); colon carcinoma (ortholog); Fanconi anemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955559 1364056 1371245 - 102014503 AGCD01073641;GBBH01091697;XM_013509008;XM_013509009;XM_013509010;XM_013509011;XM_013509012;XM_013509013;XM_013509014;XM_013509015;XM_013509016;XM_013509017 XP_013364462;XP_013364463;XP_013364464;XP_013364465;XP_013364466;XP_013364467;XP_013364468;XP_013364469;XP_013364470;XP_013364471 MODEL 8748444 pseudo LOC102022868 ubiquitin-associated protein 2-like pseudogene NW_004955448 8332355 8337356 - 102022868 AGCD01041441;XR_262464 MODEL 8961610 protein-coding LOC102024596 olfactory receptor 4C11-like NW_004955511 318058 318990 + 102024596 AGCD01066327;XM_005407940 XP_005407997 MODEL 8777636 protein-coding LOC102012139 gonadotropin-releasing hormone receptor NW_004955447 5179231 5190335 + 102012139 AGCD01040748;XM_005392835;XM_005392836 XP_005392892;XP_005392893 MODEL 39132182 rrna 5S_rRNA 5S ribosomal RNA 9001480 protein-coding LOC102008992 collagen alpha-1(III) chain-like NW_004955442 14342214 14354918 - 102008992 AGCD01037812;AGCD01037813;GBDJ01377609;XM_013517858;XM_013517859;XM_013517860 XP_013373312;XP_013373313;XP_013373314 MODEL 10118799 ncrna LOC106149305 uncharacterized LOC106149305 NW_004955405 16137388 16147394 + 106149305 AGCD01004962;AGCD01004963;GBCQ01159090;XR_001235383 MODEL 10253419 protein-coding LOC106147160 uncharacterized LOC106147160 NW_004955524 1216167 1224898 - 106147160 AGCD01068739;GBDF01005774;XM_013507188 XP_013362642 MODEL 8716520 protein-coding LOC102003601 EKC/KEOPS complex subunit LAGE3-like NW_004955585 4764 6040 + 102003601 AGCD01075987;XM_005414426 XP_005414483 MODEL 8711928 protein-coding Nap1l1 nucleosome assembly protein 1 like 1 ENCODES a protein that exhibits histone chaperone activity (ortholog); kinase binding (ortholog); INVOLVED IN cellular response to peptide hormone stimulus (ortholog); positive regulation of neural precursor cell proliferation (ortholog); positive regulation of neurogenesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); appendiceal neoplasm (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955405 15332696 15365181 - 102010541 AGCD01004943;AGCD01004944;GBCE01030847;XM_005374339;XM_005374340;XM_013517718;XM_013517723;XM_013517725 XP_005374396;XP_005374397;XP_013373172;XP_013373177;XP_013373179 MODEL 8784043 protein-coding Nxn nucleoredoxin ENCODES a protein that exhibits protein-disulfide reductase [NAD(P)H] activity (ortholog); thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN circulatory system development (ortholog); in utero embryonic development (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH autosomal recessive Robinow syndrome 2 (ortholog); basal cell carcinoma (ortholog); brachydactyly (ortholog); FOUND IN nucleus (ortholog) NW_004955481 2338005 2481557 - 102027301 AGCD01056874;GBCE01117914;GBCQ01096980;XM_013503381;XM_013503382 XP_013358835;XP_013358836 MODEL 8703813 protein-coding Bmpr1b bone morphogenetic protein receptor type 1B ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acromesomelic dysplasia 3 (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog); asthma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955405 5408171 5784930 + 102013791 AGCD01004682;AGCD01004683;AGCD01004684;AGCD01004685;AGCD01004686;AGCD01004687;GBDI01326385;XM_013517414;XM_013517415;XM_013517416;XM_013517418;XM_013517428;XM_013517431;XM_013517434;XM_013517436;XM_013517437 XP_013372868;XP_013372869;XP_013372870;XP_013372872;XP_013372882;XP_013372885;XP_013372888;XP_013372890;XP_013372891 MODEL 8765304 protein-coding Ctdnep1 CTD nuclear envelope phosphatase 1 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN gamete generation (ortholog); mesoderm development (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); medulloblastoma non-WNT/non-SHH (ortholog); medulloblastoma non-WNT/non-SHH group 3 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); Nem1-Spo7 phosphatase complex (ortholog) NW_004955467 9660088 9666878 + 102025671 AGCD01051520;AGCD01051521;GBBH01119701;GBCB01006512;XM_005399537 XP_005399594 MODEL 9032679 ncrna LOC102025329 uncharacterized LOC102025329 NW_004955461 14190918 14214161 + 102025329 AGCD01049048;GBDI01306582;XR_001236562 MODEL 9035341 protein-coding Gpr139 G protein-coupled receptor 139 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); identical protein binding (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH thymoma (ortholog) NW_004955442 3698546 3737281 - 102012477 AGCD01037515;XM_005391121 XP_005391178 MODEL 8742958 protein-coding LOC102010954 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1373617 1378077 + 102010954 AGCD01074469;GBBH01148932;GBDK01175825;XM_013509300 XP_013364754 MODEL 39132400 snrna U6 U6 spliceosomal RNA 9025654 protein-coding Dek DEK proto-oncogene ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of double-strand break repair (ortholog); regulation of double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN B-WICH complex (ortholog); contractile muscle fiber (ortholog); nucleoplasm (ortholog) NW_004955408 28470207 28472083 - 102008065 AGCD01008713;XM_013509494 XP_013364948 MODEL 8771381 pseudo LOC102007906 vomeronasal type-1 receptor 48-like NW_004955421 21878638 21880909 - 102007906 AGCD01022124;XM_005383931 MODEL 9038569 protein-coding Dbh dopamine beta-hydroxylase ENCODES a protein that exhibits copper ion binding (ortholog); dopamine beta-monooxygenase activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral response to ethanol (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Anorexia (ortholog); attention deficit hyperactivity disorder (ortholog); brain ischemia (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); dendrite (ortholog) NW_004955513 2918085 2932481 + 102021158 AGCD01066892;GBDK01427732;XM_005408455 XP_005408512 MODEL 9044779 pseudo LOC102023239 40S ribosomal protein S18 pseudogene NW_004955410 25328235 25339663 - 102023239 AGCD01011150 MODEL 8702184 protein-coding Sftpc surfactant protein C ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955403 45649149 45651421 + 102004547 AGCD01002825;GBDK01013470;XM_005373651;XM_005373652 XP_005373708;XP_005373709 MODEL 8974619 protein-coding Mmd2 monocyte to macrophage differentiation associated 2 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); positive regulation of protein kinase activity (ortholog); positive regulation of Ras protein signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); stomach cancer (ortholog); FOUND IN Golgi membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955460 10872898 10932767 + 102006750 AGCD01048622;AGCD01048623;AGCD01048624;AGCD01048625;GBBH01109541;XM_005397850;XM_013521249;XM_013521250;XM_013521251;XM_013521252;XM_013521253 XP_005397907;XP_013376703;XP_013376704;XP_013376705;XP_013376706;XP_013376707 MODEL 8936844 ncrna LOC102005337 uncharacterized LOC102005337 NW_004955406 13632067 13716155 - 102005337 AGCD01005948;AGCD01005949;GBDF01163324;XR_001236425;XR_001236426;XR_001236427 MODEL 8774065 protein-coding Irs1 insulin receptor substrate 1 ENCODES a protein that exhibits insulin receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphatidylinositol 3-kinase activator activity (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN caveola (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955453 7685715 7742262 + 102016015 AGCD01044750;GBCB01002406;XM_005395475 XP_005395532 MODEL 10229378 ncrna LOC106150098 uncharacterized LOC106150098 NW_004955406 23931360 23980352 + 106150098 AGCD01006186;GBDF01181440;XR_001236708 MODEL 39131625 rrna 5S_rRNA 5S ribosomal RNA 8759371 protein-coding Galntl6 polypeptide N-acetylgalactosaminyltransferase like 6 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetylgalactosamine (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 33920850 34941539 - 102026823 AGCD01002468;AGCD01002469;AGCD01002470;AGCD01002471;AGCD01002472;AGCD01002473;AGCD01002474;AGCD01002475;AGCD01002476;AGCD01002477;AGCD01002478;AGCD01002479;AGCD01002480;AGCD01002481;AGCD01002482;AGCD01002483;AGCD01002484;AGCD01002485;AGCD01002486;AGCD01002487;AGCD01002488;AGCD01002489;AGCD01002490;AGCD01002491;AGCD01002492;GBDF01177349;XM_005373544 XP_005373601 MODEL 8971984 ncrna LOC102023602 uncharacterized LOC102023602 NW_004955420 10924063 10957818 - 102023602 AGCD01020796;GBDF01145322;XR_260699 MODEL 39134401 misc_rna 7SK 7SK RNA 9009767 pseudo LOC102012546 ribosome biogenesis protein NSA2 homolog pseudogene NW_004955492 272333 273124 + 102012546 AGCD01060632 MODEL 9021479 protein-coding Atad2b ATPase family AAA domain containing 2B ENCODES a protein that exhibits histone reader activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955469 6022152 6162222 - 102022070 AGCD01052364;AGCD01052365;GBDJ01386641;XM_005400366;XM_005400367 XP_005400423;XP_005400424 MODEL 39134104 misc_rna 7SK 7SK RNA 8824239 protein-coding Tshz2 teashirt zinc finger homeobox 2 INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); lung cancer (ortholog) NW_004955445 5571587 5830728 - 102016322 AGCD01039472;AGCD01039473;AGCD01039474;AGCD01039475;GBDF01222748;XM_005392287 XP_005392344 MODEL 8965659 protein-coding Gmpr guanosine monophosphate reductase ENCODES a protein that exhibits GMP reductase activity (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955483 9559079 9608807 - 102026325 AGCD01057861;GBCB01007020;XM_005403414;XM_005403415 XP_005403471;XP_005403472 MODEL 8980438 protein-coding CUNH20orf144 chromosome unknown C20orf144 homolog ASSOCIATED WITH lung cancer (ortholog) NW_004955422 27654049 27655356 - 102027199 AGCD01023331;GBDI01161984;XM_005384840 XP_005384897 MODEL 8999609 protein-coding Snx9 sorting nexin 9 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); Arp2/3 complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cuticular plate (ortholog) NW_004955439 4422385 4503408 - 102015984 AGCD01035709;AGCD01035710;AGCD01035711;GBDI01118897;XM_005390533 XP_005390590 MODEL 8911469 protein-coding Plin2 perilipin 2 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955434 21573860 21580990 - 102018432 AGCD01032639;GBCB01119738;GBDJ01082348;XM_013516386 XP_013371840 MODEL 9035102 protein-coding Myh1 myosin heavy chain 1 INVOLVED IN muscle contraction (ortholog); sensory perception of sound (ortholog); FOUND IN A band (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); intercalated disc (ortholog) NW_004955467 6684104 6707597 + 102005355 AGCD01051421;AGCD01051422;GBDI01021660;GBDI01021664;XM_013522111 XP_013377565 MODEL 8993926 pseudo LOC102003226 ubiquitin-conjugating enzyme E2 G1 pseudogene NW_004955413 33482340 33483687 - 102003226 AGCD01014672 MODEL 8882929 protein-coding Bbx BBX high mobility group box domain containing ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN bone development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955427 8221339 8476405 + 102010713 AGCD01027068;AGCD01027069;AGCD01027070;AGCD01027071;AGCD01027072;AGCD01027073;AGCD01027074;GBBH01150536;XM_005386346;XM_005386349;XM_005386351;XM_005386352;XM_013515184;XM_013515185;XM_013515186;XM_013515187 XP_005386403;XP_005386406;XP_005386408;XP_005386409;XP_013370638;XP_013370639;XP_013370640;XP_013370641 MODEL 39132185 rrna 5S_rRNA 5S ribosomal RNA 8967308 protein-coding Hoxa9 homeobox A9 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); definitive hemopoiesis (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 28856661 28861803 - 102006990 AGCD01011262;GBCQ01070723;XM_005377462 XP_005377519 MODEL 8761523 pseudo LOC102018191 elongation factor 1-alpha 1-like NW_004955487 4175137 4176506 - 102018191 AGCD01059300 MODEL 8900778 protein-coding Mme membrane metalloendopeptidase ENCODES a protein that exhibits cardiolipin binding (ortholog); endopeptidase activity (ortholog); exopeptidase activity (ortholog); INVOLVED IN amygdala development (ortholog); amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; kallikrein-kinin cascade pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); brush border (ortholog); cytoplasm (ortholog) NW_004955448 6193113 6311666 + 102013564 AGCD01041387;AGCD01041388;GBDF01075615;XM_005393061;XM_005393062;XM_013518632;XM_013518633 XP_005393118;XP_005393119;XP_013374086;XP_013374087 MODEL 8954792 ncrna LOC102021532 uncharacterized LOC102021532 NW_004955410 9692203 9701655 + 102021532 AGCD01010773;GBDF01305484;XR_259828 MODEL 8807142 protein-coding Necap1 NECAP endocytosis associated 1 INVOLVED IN endocytosis (ortholog); presynaptic endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy 21 (ortholog); Developmental Disabilities (ortholog); FOUND IN clathrin vesicle coat (ortholog); clathrin-coated pit (ortholog); presynapse (ortholog) NW_004955413 6737785 6751672 + 102029166 AGCD01013773;GBDF01015578;XM_005378916 XP_005378973 MODEL 8809790 protein-coding Nxnl1 nucleoredoxin like 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); photoreceptor cell maintenance (ortholog); response to oxidative stress (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955524 825818 827167 + 102009314 AGCD01068713;XM_005409529 XP_005409586 MODEL 8994863 pseudo LOC102006407 28S ribosomal protein S36, mitochondrial pseudogene NW_004955402 32490863 32492527 - 102006407 AGCD01000824 MODEL 8774824 ncrna LOC102025330 uncharacterized LOC102025330 NW_004955410 21642542 21670562 - 102025330 AGCD01011064;GBDF01276812;XR_001232740;XR_259855 MODEL 8737569 pseudo LOC102010171 40S ribosomal protein SA pseudogene NW_004955421 22931886 22933055 - 102010171 AGCD01022164 MODEL 39132401 snrna U6 U6 spliceosomal RNA 8862642 protein-coding LOC102022871 zinc finger protein 805-like NW_004955584 81415 98349 - 102022871 AGCD01075917;AGCD01075918;GBDJ01006378;XM_013509842 XP_013365296 MODEL 8810937 ncrna LOC102024597 uncharacterized LOC102024597 NW_004955511 2796192 2798196 + 102024597 AGCD01066428;GBDF01194807;XR_264420 MODEL 8808177 protein-coding LOC102012140 olfactory receptor 2G3-like NW_004955576 1369561 1370502 - 102012140 AGCD01075374;XM_005413955 XP_005414012 MODEL 8940020 protein-coding Fancl FA complementation group L ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); gamete generation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nuclear envelope (ortholog) NW_004955424 25251701 25307236 + 102003155 AGCD01025040;GBDF01279228;XM_005385759;XM_013514669 XP_005385816;XP_013370123 MODEL 8880101 protein-coding Hgs hepatocyte growth factor-regulated tyrosine kinase substrate ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); ubiquitin-like protein ligase binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); membrane invagination (ortholog); negative regulation of angiogenesis (ortholog); PARTICIPATES IN autophagy pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955506 1405543 1418095 - 102029313 AGCD01065262;GBCB01044465;XM_005407264;XM_005407265 XP_005407321;XP_005407322 MODEL 8782359 protein-coding Flt4 fms related receptor tyrosine kinase 4 ENCODES a protein that exhibits growth factor binding (ortholog); protein homodimerization activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); lung alveolus development (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 98995 137922 + 102025873 AGCD01007908;AGCD01007909;GBCE01084871;XM_013507813 XP_013363267 MODEL 8875988 pseudo LOC102023241 pre-mRNA-splicing regulator WTAP-like NW_004955411 32294790 32295591 + 102023241 AGCD01012301 MODEL 8892538 protein-coding Dbi diazepam binding inhibitor, acyl-CoA binding protein ENCODES a protein that exhibits benzodiazepine receptor binding (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to nutrient (ortholog); conditioned place preference (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN contractile muscle fiber (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955459 10342528 10347700 - 102023439 AGCD01048186;GBBH01031932;XM_005397678;XM_013521081 XP_005397735;XP_013376535 MODEL 10252596 protein-coding LOC106147161 translation initiation factor IF-2-like NW_004955524 1360928 1361851 - 106147161 AGCD01068748;AGCD01068749;GBBH01073899;GBDF01057450;XM_013507189 XP_013362643 MODEL 39131626 rrna 5S_rRNA 5S ribosomal RNA 8718679 protein-coding Kiss1r KISS1 receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN arachidonate secretion (ortholog); calcium-mediated signaling (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); central precocious puberty 1 (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); membrane (ortholog) NW_004955495 6918632 6921891 - 102017471 AGCD01062100;GBDI01039469;XM_005406013;XM_013505106 XP_005406070;XP_013360560 MODEL 8873730 protein-coding Irs2 insulin receptor substrate 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); insulin receptor binding (ortholog); phosphatidylinositol 3-kinase activator activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to endothelin (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN erythropoietin signaling pathway; insulin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955404 2531484 2555383 + 102015915 AGCD01003261;AGCD01003262;GBBH01000570;GBDF01076651;XM_013515759 XP_013371213 MODEL 8814980 ncrna LOC102007527 uncharacterized LOC102007527 NW_004955465 7812882 7828643 - 102007527 AGCD01050469;GBDF01276911;XR_263251 MODEL 9048353 protein-coding LOC102003603 polyadenylate-binding protein 1-like 2 NW_004955591 918513 919451 - 102003603 AGCD01076286;XM_005414600 XP_005414657 MODEL 8883866 protein-coding Nap1l4 nucleosome assembly protein 1 like 4 ENCODES a protein that exhibits nucleosome binding (ortholog); INVOLVED IN nucleosome assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955422 14630858 14673171 - 102011997 AGCD01022862;AGCD01022863;GBDI01060155;XM_005384214;XM_013514102;XM_013514103;XM_013514104;XM_013514105;XM_013514106;XM_013514107 XP_005384271;XP_013369556;XP_013369557;XP_013369558;XP_013369559;XP_013369560;XP_013369561 MODEL 8887541 protein-coding Ctdp1 CTD phosphatase subunit 1 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); Tat protein binding (ortholog); TFIIF-class transcription factor complex binding (ortholog); INVOLVED IN exit from mitosis (ortholog); host-mediated activation of viral transcription (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Ataxia (ortholog); cervical cancer (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN centrosome (ortholog); midbody (ortholog); nucleoplasm (ortholog) NW_004955402 62817822 62914250 + 102025860 AGCD01001649;AGCD01001650;GBBH01006923;GBDF01053785;XM_005373116;XM_013511639 XP_005373173;XP_013367093 MODEL 8805325 protein-coding Wdr97 WD repeat domain 97 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955454 2769356 2778024 + 102023430 AGCD01045033;GBCB01051894;XM_005395848;XM_013520172;XM_013520173;XM_013520174;XM_013520175;XR_001236234 XP_005395905;XP_013375626;XP_013375627;XP_013375628;XP_013375629 MODEL 8852013 protein-coding Galr1 galanin receptor 1 ENCODES a protein that exhibits galanin receptor activity (ortholog); neuropeptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); positive regulation of cortisol secretion (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); depressive disorder (ortholog); major depressive disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955402 60449660 60559549 + 102020401 AGCD01001592;AGCD01001593;AGCD01001594;AGCD01001595;AGCD01001596;AGCD01001597;AGCD01001598;GBCQ01164022;XM_005373099;XR_001233014;XR_001233015;XR_001233016;XR_001233018;XR_259118;XR_259119 XP_005373156 MODEL 8700292 protein-coding Bmpr2 bone morphogenetic protein receptor type 2 ENCODES a protein that exhibits activin receptor activity, type II (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); aortic valve development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955457 12235780 12315680 - 102004042 AGCD01047005;AGCD01047006;GBCB01060551;GBDF01280157;XM_013520738 XP_013376192 MODEL 8843898 protein-coding LOC102013638 chromosome unknown open reading frame, human C10orf113 NW_004955429 7379866 7403057 + 102013638 AGCD01028592;AGCD01028593;GBDK01367199;XM_005387236 XP_005387293 MODEL 8737022 protein-coding CUNH21orf140 chromosome unknown C21orf140 homolog NW_004955407 33757974 33758956 - 102027146 AGCD01007707;GBDF01080715;XM_005375702 XP_005375759 MODEL 8943907 protein-coding Gpr142 G protein-coupled receptor 142 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955553 1256086 1278280 + 102003810 AGCD01072873;AGCD01072874;AGCD01072875;AGCD01072876;GBDI01220829;GBDJ01312032;XM_013508639 XP_013364093 MODEL 8777141 protein-coding Ptp4a2 protein tyrosine phosphatase 4A2 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955452 10293958 10331868 - 102013578 AGCD01044271;AGCD01044272;AGCD01044273;GBDI01068104;XM_005395037 XP_005395094 MODEL 8887921 ncrna LOC102004989 uncharacterized LOC102004989 NW_004955445 15824960 15826502 + 102004989 AGCD01039857;GBDF01080622;XR_262340 MODEL 9017592 ncrna LOC102008997 uncharacterized LOC102008997 NW_004955402 56853757 56893100 + 102008997 AGCD01001479;GBDF01111279;XR_001230748;XR_259106 MODEL 9059933 protein-coding Tshz3 teashirt zinc finger homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); kidney morphogenesis (ortholog); kidney smooth muscle cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); congenital anomalies of kidney and urinary tract (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN growth cone (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955468 6448167 6669706 + 102006647 AGCD01051985;AGCD01051986;AGCD01051987;AGCD01051988;GBDJ01311365;XM_005400095;XR_263394 XP_005400152 MODEL 10217465 ncrna LOC106149306 uncharacterized LOC106149306 NW_004955442 13048379 13055964 - 106149306 AGCD01037757;XR_001235385 MODEL 8979095 protein-coding LOC102006026 cystatin-13-like NW_004955415 30473505 30482358 + 102006026 AGCD01016664;GBDF01008193;XM_005380973 XP_005381030 MODEL 8878480 ncrna LOC102005341 uncharacterized LOC102005341 NW_004955408 8988844 8997598 - 102005341 AGCD01008230;GBDF01277633;XR_259674 MODEL 9066389 protein-coding LOC102022873 disintegrin and metalloproteinase domain-containing protein 5-like NW_004956525 2555 3839 + 102022873 AGCD01079741;GBDK01094790;XM_005415203 XP_005415260 MODEL 8786859 protein-coding Plin3 perilipin 3 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); lipid droplet (ortholog) NW_004955495 4177701 4190052 + 102003035 AGCD01061900;AGCD01061901;GBDF01047898;XM_005405777;XM_013505193;XM_013505194 XP_005405834;XP_013360647;XP_013360648 MODEL 8950095 protein-coding Myh10 myosin heavy chain 10 ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); actin filament bundle distribution (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actomyosin (ortholog); axon (ortholog); brush border (ortholog) NW_004955467 8298514 8427459 + 102014032 AGCD01051449;AGCD01051450;GBCE01083189;XM_005399398;XM_005399399;XM_013522097;XM_013522098 XP_005399455;XP_005399456;XP_013377551;XP_013377552 MODEL 8836357 protein-coding Ptp4a3 protein tyrosine phosphatase 4A3 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); endothelial cell migration (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colonic Neoplasms (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955454 429051 440328 + 102015689 AGCD01044958;GBDI01229359;XM_005395723;XM_013520280;XM_013520281;XM_013520282 XP_005395780;XP_013375734;XP_013375735;XP_013375736 MODEL 9007412 protein-coding Sftpd surfactant protein D ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN lung alveolus development (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of phagocytosis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; surfactant homeostasis pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); multivesicular body (ortholog) NW_004955510 213468 226096 + 102025710 AGCD01066142;GBDK01010352;XM_005407866;XM_005407867;XM_013506331 XP_005407923;XP_005407924;XP_013361785 MODEL 8756228 ncrna LOC102012550 uncharacterized LOC102012550 NW_004955422 29069963 29074568 + 102012550 AGCD01023378;GBDJ01405387;XR_260929 MODEL 9049578 protein-coding Hoxb1 homeobox B1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12707560 12708950 + 102007396 AGCD01043422;XM_005394243 XP_005394300 MODEL 8805867 ncrna LOC102018192 uncharacterized LOC102018192 NW_004955491 8497950 8499449 - 102018192 AGCD01060616;GBDF01057299;XR_264041;XR_264042 MODEL 8793518 protein-coding Soat1 sterol O-acyltransferase 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol O-acyltransferase activity (ortholog); fatty-acyl-CoA binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic atherosclerosis (ortholog); atherosclerosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955406 18644351 18708666 + 102022462 AGCD01006051;AGCD01006052;AGCD01006053;AGCD01006054;AGCD01006055;AGCD01006056;AGCD01006057;GBBH01180582;GBDJ01300596;XM_013521162 XP_013376616 MODEL 8830051 protein-coding Nxnl2 nucleoredoxin like 2 INVOLVED IN sensory perception of smell (ortholog); visual perception (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian cancer (ortholog) NW_004955515 3413398 3424205 - 102018852 AGCD01067286;GBDJ01124373;XM_005408883;XM_013506875;XM_013506876;XM_013506877;XM_013506878;XR_001231794;XR_001231795 XP_005408940;XP_013362329;XP_013362330;XP_013362331;XP_013362332 MODEL 39132403 snrna U6 U6 spliceosomal RNA 10336183 ncrna LOC106150099 uncharacterized LOC106150099 NW_004955464 5470613 5495391 - 106150099 AGCD01050008;AGCD01050009;GBCQ01109244;XR_001236707 MODEL 9032080 protein-coding Bcam basal cell adhesion molecule (Lutheran blood group) ENCODES a protein that exhibits laminin binding (ortholog); laminin receptor activity (ortholog); INVOLVED IN cell adhesion (ortholog); cell-matrix adhesion (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955555 1943445 1950810 + 102027119 AGCD01073118;GBBH01004296;GBDI01013618;XM_013508693 XP_013364147 MODEL 9061857 protein-coding LOC102023608 olfactory receptor-like protein OLF3 NW_004955491 271119 272075 + 102023608 AGCD01060326;XM_005404878 XP_005404935 MODEL 39134105 misc_rna 7SK 7SK RNA 9046264 protein-coding Atad5 ATPase family AAA domain containing 5 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Elg1 RFC-like complex (ortholog); nucleus (ortholog) NW_004955481 6986128 7031113 + 102021970 AGCD01057046;AGCD01057047;GBDF01075712;XM_005402808 XP_005402865 MODEL 8971448 protein-coding Tsks testis specific serine kinase substrate ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); myoepithelioma (ortholog); FOUND IN centriole (ortholog) NW_004955559 1151247 1162856 + 102004756 AGCD01073632;GBCE01108010;XM_005412834;XM_005412835;XM_005412836;XM_005412837;XM_005412838;XM_005412839;XM_005412840;XM_005412841;XM_005412843;XM_005412845 XP_005412891;XP_005412892;XP_005412893;XP_005412894;XP_005412895;XP_005412896;XP_005412897;XP_005412898;XP_005412900;XP_005412902 MODEL 8774383 protein-coding Gmpr2 guanosine monophosphate reductase 2 ENCODES a protein that exhibits GMP reductase activity (ortholog); INVOLVED IN GMP metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Breast Cancer, Familial (ortholog) NW_004955409 36166129 36173247 - 102005780 AGCD01010450;GBDJ01131488;XM_005377024;XM_005377025;XM_013510403 XP_005377081;XP_005377082;XP_013365857 MODEL 9014710 ncrna LOC102010958 uncharacterized LOC102010958 NW_004955402 5775147 5790716 - 102010958 AGCD01000140;AGCD01000141;GBDI01357888;XR_259032 MODEL 9037925 protein-coding Nap1l5 nucleosome assembly protein 1 like 5 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955474 11743565 11745311 + 102026213 AGCD01054634;GBCQ01097262;XM_005401453 XP_005401510 MODEL 8947370 protein-coding Mmel1 membrane metalloendopeptidase like 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955486 8635727 8662793 + 102003879 AGCD01059153;GBDF01003971;XM_005404157;XM_005404158;XM_005404159;XM_005404160;XM_013504241 XP_005404214;XP_005404215;XP_005404216;XP_005404217;XP_013359695 MODEL 8754825 ncrna LOC102007907 uncharacterized LOC102007907 NW_004955491 1073965 1082901 - 102007907 AGCD01060347;GBCB01024533;XR_264032 MODEL 8971322 protein-coding Necap2 NECAP endocytosis associated 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN clathrin vesicle coat (ortholog) NW_004955527 1885708 1900424 - 102026668 AGCD01069419;AGCD01069420;GBDI01176012;XM_005409827 XP_005409884 MODEL 8843694 pseudo LOC102006412 uncharacterized LOC102006412 NW_004955450 9656148 9662906 + 102006412 AGCD01042594 MODEL 8870123 protein-coding Dele1 DAP3 binding cell death enhancer 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular response to stress (ortholog); DNA damage response (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955415 11851023 11869905 - 102030065 AGCD01016178;GBDK01238175;XM_005380717;XM_013512317;XM_013512318;XM_013512319;XM_013512320 XP_005380774;XP_013367771;XP_013367772;XP_013367773;XP_013367774 MODEL 8765745 pseudo LOC102013640 S-formylglutathione hydrolase pseudogene NW_004955431 13529546 13530392 + 102013640 AGCD01030308 MODEL 8970529 protein-coding LOC102025331 cleavage stimulation factor subunit 2 tau variant-like NW_004955462 1290389 1314225 - 102025331 AGCD01049111;AGCD01049112;XM_005398315 XP_005398372 MODEL 8743577 protein-coding LOC102010175 sulfotransferase 1A1-like NW_004955493 6792319 6795493 - 102010175 AGCD01061139;AGCD01061140;GBCQ01097961;GBCQ01097964;XM_013504817 XP_013360271 MODEL 8780571 ncrna LOC102003227 uncharacterized LOC102003227 NW_004955469 7027260 7028336 + 102003227 AGCD01052404;GBBH01203178;XR_263433 MODEL 8881599 pseudo LOC102024598 serine/threonine-protein kinase PLK4-like NW_004955429 19408775 19420812 + 102024598 AGCD01028952 MODEL 39132186 rrna 5S_rRNA 5S ribosomal RNA 9040196 protein-coding LOC102004990 zinc finger protein 14-like NW_004955569 1305100 1342506 - 102004990 AGCD01074646;AGCD01074647;AGCD01074648;AGCD01074649;GBDI01011400;XM_013509371 XP_013364825 MODEL 39134402 misc_rna 7SK 7SK RNA 39131627 rrna 5S_rRNA 5S ribosomal RNA 9000455 ncrna LOC102022874 uncharacterized LOC102022874 NW_004955403 52159368 52172169 + 102022874 AGCD01003003;GBCQ01030968;XR_001234081;XR_001234082;XR_001234085;XR_259257 MODEL 8916092 protein-coding Irs4 insulin receptor substrate 4 PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); colorectal cancer (ortholog); congenital nongoitrous hypothyroidism 9 (ortholog) NW_004955490 7135969 7139802 + 102012544 AGCD01060248;XM_005404671;XM_005404672 XP_005404728;XP_005404729 MODEL 9013605 ncrna LOC102021533 uncharacterized LOC102021533 NW_004955410 19329312 19334964 - 102021533 AGCD01011019;GBDK01421036;XR_259850 MODEL 8852521 protein-coding Wdsub1 WD repeat, sterile alpha motif and U-box domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955449 14301798 14348735 + 102006968 AGCD01042164;GBDI01172204;XM_005393376;XM_005393377;XM_013518706;XM_013518707;XR_001235809 XP_005393433;XP_005393434;XP_013374160;XP_013374161 MODEL 8798102 protein-coding LOC102003605 protein FAM127A NW_004955602 144599 145888 + 102003605 AGCD01076763;AGCD01076764;GBBH01002232;GBCQ01009918;XM_005414828 XP_005414885 MODEL 8811620 protein-coding Myh11 myosin heavy chain 11 ENCODES a protein that exhibits cytoskeletal motor activity (ortholog); structural constituent of muscle (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); elastic fiber assembly (ortholog); smooth muscle contraction (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); muscle myosin complex (ortholog) NW_004955442 528317 644252 - 102023851 AGCD01037426;AGCD01037427;GBDJ01383802;XM_005391067;XM_005391074;XM_013517838;XM_013517839;XM_013517840;XM_013517841;XM_013517842 XP_005391124;XP_005391131;XP_013373292;XP_013373293;XP_013373294;XP_013373295;XP_013373296 MODEL 8836725 protein-coding Bcan brevican INVOLVED IN cell-matrix adhesion (ortholog); gliogenesis (ortholog); hippocampus development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cell surface (ortholog) NW_004955545 2723780 2739334 + 102006498 AGCD01071921;GBDJ01354414;XM_005411692 XP_005411749 MODEL 8848795 protein-coding Galr2 galanin receptor 2 ENCODES a protein that exhibits galanin receptor activity (ortholog); neuropeptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); galanin-activated signaling pathway (ortholog); ASSOCIATED WITH depressive disorder (ortholog); major depressive disorder (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cilium (ortholog) NW_004955506 6172366 6178061 - 102005065 AGCD01065402;GBDK01276922;XM_005407455;XM_005407457 XP_005407512;XP_005407514 MODEL 9052232 protein-coding CUNH21orf58 chromosome unknown C21orf58 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955407 42712152 42728690 - 102019471 AGCD01007895;GBDK01018641;XM_013505741;XM_013505747;XM_013505752;XM_013505756;XM_013505761 XP_013361195;XP_013361201;XP_013361206;XP_013361210;XP_013361215 MODEL 8929960 protein-coding LOC102009002 KN motif and ankyrin repeat domain-containing protein 2-like NW_004955774 14744 24159 - 102009002 AGCD01078322;AGCD01078323;AGCD01078324;GBCQ01009072;GBDJ01022892;XM_013510190 XP_013365644 MODEL 8877178 protein-coding Napa NSF attachment protein alpha ENCODES a protein that exhibits protein-containing complex binding (ortholog); SNARE binding (ortholog); INVOLVED IN apical protein localization (ortholog); brain development (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH Idiopathic Generalized Epilepsy (ortholog); stomach cancer (ortholog); temporal lobe epilepsy (ortholog); FOUND IN cytoplasmic vesicle (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955574 1330911 1353392 - 102012814 AGCD01075174;GBCB01007521;XM_005413880;XM_005413881;XM_013509542;XM_013509543 XP_005413937;XP_005413938;XP_013364996;XP_013364997 MODEL 8993713 ncrna LOC102023242 uncharacterized LOC102023242 NW_004955465 3870352 3871548 - 102023242 AGCD01050394;GBCE01079619;XR_263235 MODEL 10071273 protein-coding LOC106147162 basic proline-rich protein-like NW_004955524 2754870 2755157 - 106147162 AGCD01068834;GBDJ01268040;XM_013507195 XP_013362649 MODEL 10377272 ncrna LOC106149307 uncharacterized LOC106149307 NW_004955442 6998914 7007770 - 106149307 AGCD01037609;GBDI01089295;XR_001235386;XR_001235387 MODEL 8794617 protein-coding LOC102006031 zinc finger protein 14-like NW_004955417 31556784 31573000 - 102006031 AGCD01018655;AGCD01018656;GBDJ01003802;XM_013512775 XP_013368229 MODEL 8893516 pseudo LOC102005342 COP9 signalosome complex subunit 8 pseudogene NW_004955457 11873480 11874149 - 102005342 AGCD01046991 MODEL 9034366 protein-coding Myh13 myosin heavy chain 13 INVOLVED IN cellular response to starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN myofibril (ortholog) NW_004955467 6816393 6872754 + 102005019 AGCD01051423;AGCD01051424;AGCD01051425;GBDI01282899;XM_013522112 XP_013377566 MODEL 8974604 protein-coding Dennd10 DENN domain containing 10 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosome transport via multivesicular body sorting pathway (ortholog); protein transport (ortholog); regulation of early endosome to late endosome transport (ortholog); FOUND IN late endosome (ortholog) NW_004955431 23601338 23623852 + 102006380 AGCD01030543;AGCD01030544;AGCD01030545;GBDF01154405;XM_005387885;XM_013515881 XP_005387942;XP_013371335 MODEL 9051831 protein-coding Kit KIT proto-oncogene, receptor tyrosine kinase ENCODES a protein that exhibits cytokine binding (ortholog); protease binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell chemotaxis (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); cell-cell junction (ortholog) NW_004955447 16149014 16226151 - 102007952 AGCD01041077;GBDJ01350236;XM_013518572;XM_013518573;XM_013518575 XP_013374026;XP_013374027;XP_013374029 MODEL 10131559 protein-coding Plin4 perilipin 4 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Coffin-Siris syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955495 4417672 4426945 + 106146790 AGCD01061922;GBDK01147195;XM_013505186;XM_013505187 XP_013360640;XP_013360641 MODEL 8707173 protein-coding LOC102007528 histone H2B type 1 NW_004955465 13392728 13393418 + 102007528 AGCD01050607;XM_005398952 XP_005399009 MODEL 8787961 protein-coding Ptpa protein phosphatase 2 phosphatase activator ENCODES a protein that exhibits ATP binding (ortholog); phosphatase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Disease Progression (ortholog); FOUND IN ATPase complex (ortholog); calcium channel complex (ortholog); cytoplasm (ortholog) NW_004955570 1429316 1454820 + 102015788 AGCD01074814;GBDI01022159;XM_005413611 XP_005413668 MODEL 9021302 pseudo LOC102012551 leucine-rich repeat-containing protein 58 pseudogene NW_004955494 8245217 8247491 + 102012551 AGCD01061581 MODEL 9016007 protein-coding Sfxn1 sideroflexin 1 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-serine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); iron ion transport (ortholog); L-alanine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955408 28054211 28105294 + 102006545 AGCD01008703;AGCD01008704;AGCD01008705;AGCD01008706;AGCD01008707;GBDK01358301;XM_005376362;XM_013509460 XP_005376419;XP_013364914 MODEL 8774005 protein-coding Flvcr1 FLVCR choline and heme transporter 1 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); heme B transmembrane transporter activity (ortholog); INVOLVED IN blood vessel development (ortholog); choline transport (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asphyxiating thoracic dystrophy (ortholog); asthma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955406 4673797 4702858 - 102013798 AGCD01005699;AGCD01005700;AGCD01005701;GBCE01057352;GBDI01219305;XM_013520040;XM_013520050 XP_013375494;XP_013375504 MODEL 8992652 protein-coding Gpr143 G protein-coupled receptor 143 ENCODES a protein that exhibits dopamine binding (ortholog); G protein-coupled receptor activity (ortholog); L-DOPA binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); melanosome localization (ortholog); melanosome organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Albinism (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); Golgi apparatus (ortholog); lysosomal membrane (ortholog) NW_004955499 7900276 7953847 - 102019618 AGCD01063607;AGCD01063608;AGCD01063609;AGCD01063610;GBDF01099668;XM_005406546;XM_013505609;XM_013505610;XM_013505613;XM_013505614;XM_013505615;XM_013505616 XP_005406603;XP_013361063;XP_013361064;XP_013361067;XP_013361068;XP_013361069;XP_013361070 MODEL 8839589 protein-coding Atat1 alpha tubulin acetyltransferase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); L-lysine N6-acetyltransferase activity, acting on acetyl phosphate as donor (ortholog); tubulin N-acetyltransferase activity (ortholog); INVOLVED IN alpha-tubulin acetylation (ortholog); dentate gyrus development (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955583 643575 652393 + 102004437 AGCD01075844;AGCD01075845;GBCE01098162;GBCQ01099542;XM_013509800 XP_013365254 MODEL 8728823 ncrna LOC102007912 uncharacterized LOC102007912 NW_004955495 2955662 2964666 + 102007912 AGCD01061813;GBDF01294554;XR_264137 MODEL 8757551 protein-coding Mmgt1 membrane magnesium transporter 1 ENCODES a protein that exhibits cobalt ion transmembrane transporter activity (ortholog); ferrous iron transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); copper ion transport (ortholog); iron ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Muscle Hypotonia (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); early endosome membrane (ortholog) NW_004955489 9086494 9133374 + 102016818 AGCD01060025;AGCD01060026;GBBH01107658;XM_005404603;XM_005404604;XM_005404605 XP_005404660;XP_005404661;XP_005404662 MODEL 9045764 protein-coding Hgsnat heparan-alpha-glucosaminide N-acetyltransferase ENCODES a protein that exhibits acyltransferase activity (ortholog); heparan-alpha-glucosaminide N-acetyltransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan catabolic process (ortholog); lysosomal transport (ortholog); protein complex oligomerization (ortholog); ASSOCIATED WITH anosognosia (ortholog); aphasia (ortholog); apraxia (ortholog); FOUND IN lysosomal lumen (ortholog); lysosomal membrane (ortholog) NW_004955457 13351963 13386521 + 102004677 AGCD01047043;AGCD01047044;GBBH01006574;GBDI01255499;XM_013520761 XP_013376215 MODEL 8725099 protein-coding Dbn1 drebrin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal motor inhibitor activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell communication by chemical coupling (ortholog); cell communication by electrical coupling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); anchoring junction (ortholog) NW_004955408 29695442 29705417 - 102027948 AGCD01008766;AGCD01008767;GBBH01209235;GBCB01098197;XM_013506526 XP_013361980 MODEL 39132404 snrna U6 U6 spliceosomal RNA 8805056 protein-coding Nxpe2 neurexophilin and PC-esterase domain family member 2 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955412 16201898 16244478 + 102014335 AGCD01012893;AGCD01012894;GBCQ01153880;XM_005378163;XM_005378164;XM_005378165;XM_013510942 XP_005378220;XP_005378221;XP_005378222;XP_013366396 MODEL 8769513 pseudo LOC102004991 UDP-glucuronosyltransferase 2B4-like NW_004955447 3992156 4014487 + 102004991 AGCD01040695;AGCD01040696;AGCD01040697;XM_005392810 MODEL 39134403 misc_rna 7SK 7SK RNA 8706723 protein-coding Gmps guanosine monophosphate synthase ENCODES a protein that exhibits enzyme binding (ortholog); GMP synthase (glutamine-hydrolyzing) activity (ortholog); GMP synthase activity (ortholog); INVOLVED IN GMP biosynthetic process (ortholog); GMP salvage (ortholog); response to L-cysteine (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; ASSOCIATED WITH acute myelomonocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955448 6931891 6984662 + 102017178 AGCD01041397;AGCD01041398;GBDF01007582;XM_005393072;XM_005393073 XP_005393129;XP_005393130 MODEL 8982399 protein-coding Ctdsp1 CTD small phosphatase 1 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of neurogenesis (ortholog); negative regulation of neuron differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955453 14971276 14976667 - 102010544 AGCD01044879;GBDF01278846;XM_005395647;XM_005395648;XM_005395649 XP_005395704;XP_005395705;XP_005395706 MODEL 8975644 pseudo LOC102021534 protein archease pseudogene NW_004955463 5982003 5982507 - 102021534 AGCD01049652 MODEL 39134106 misc_rna 7SK 7SK RNA 8832805 protein-coding Bms1 BMS1 ribosome biogenesis factor INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); ectodermal dysplasia (ortholog); lung cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955546 1054208 1089048 + 102004325 AGCD01072039;AGCD01072040;GBDF01089574;XM_005411758;XM_005411759;XM_005411761 XP_005411815;XP_005411816;XP_005411818 MODEL 8712674 protein-coding LOC102012144 cytochrome b5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN response to cadmium ion (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 57701931 57739163 - 102012144 AGCD01001508;AGCD01001509;GBDK01022341;XM_005373076 XP_005373133 MODEL 39134404 misc_rna 7SK 7SK RNA 8925317 protein-coding Fancm FA complementation group M ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); chromatin binding (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); positive regulation of protein monoubiquitination (ortholog); replication fork processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); azoospermia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955409 16751658 16809352 - 102003629 AGCD01009739;AGCD01009740;AGCD01009741;AGCD01009742;AGCD01009743;GBDF01005725;XM_013510101 XP_013365555 MODEL 8819590 protein-coding LOC102010960 zinc finger protein 154-like NW_004955584 561048 567412 + 102010960 AGCD01075948;GBDF01281692;XM_005414367 XP_005414424 MODEL 8744266 ncrna LOC102012556 uncharacterized LOC102012556 NW_004955500 5638086 5640274 - 102012556 AGCD01063847;GBDF01250373;XR_264229 MODEL 8827310 protein-coding Tsku tsukushi, small leucine rich proteoglycan ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); camera-type eye development (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 15166349 15178284 - 102013919 AGCD01015181;GBBH01001334;XM_005379848;XM_005379849 XP_005379905;XP_005379906 MODEL 9063061 pseudo LOC102013641 protein yippee-like 5 NW_004955431 4838789 4839154 + 102013641 AGCD01030014 MODEL 8701115 protein-coding Soat2 sterol O-acyltransferase 2 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol O-acyltransferase activity (ortholog); fatty-acyl-CoA binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); cholesterol storage (ortholog); PARTICIPATES IN kidney failure pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955458 383123 394003 + 102012287 AGCD01047122;AGCD01047123;GBCQ01096818;XM_005397145;XM_005397147;XM_005397148;XM_005397150;XM_005397151;XM_013521027;XM_013521028 XP_005397202;XP_005397204;XP_005397205;XP_005397207;XP_005397208;XP_013376481;XP_013376482 MODEL 9053788 ncrna LOC102025333 uncharacterized LOC102025333 NW_004955411 5078610 5095696 - 102025333 AGCD01011593;AGCD01011594;GBDF01153961;XR_259919 MODEL 8946943 protein-coding Galr3 galanin receptor 3 ENCODES a protein that exhibits galanin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); galanin-activated signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); major depressive disorder (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cilium (ortholog); non-motile cilium (ortholog) NW_004955413 24195817 24198010 + 102009490 AGCD01014355;AGCD01014356;XM_013511305 XP_013366759 MODEL 8823245 pseudo LOC102010184 olfactory receptor 5A1-like NW_004955511 3897218 3898125 - 102010184 AGCD01066481 MODEL 8867659 protein-coding LOC102024600 olfactory receptor 4C15-like NW_004955511 234273 235214 + 102024600 AGCD01066325;XM_005408183 XP_005408240 MODEL 8794561 protein-coding Napb NSF attachment protein beta ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN protein-containing complex disassembly (ortholog); regulation of ATP-dependent activity (ortholog); regulation of receptor internalization (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy 107 (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955415 30392692 30427773 - 102004274 AGCD01016661;AGCD01016662;AGCD01016663;AGCD01016664;GBCE01013401;XM_005380968 XP_005381025 MODEL 8781899 protein-coding Hoxb13 homeobox B13 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); epithelial cell maturation involved in prostate gland development (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); ductal carcinoma in situ (ortholog); FOUND IN nucleoplasm (ortholog); transcription regulator complex (ortholog) NW_004955451 12536415 12538169 + 102003717 AGCD01043401;XM_005394233 XP_005394290 MODEL 10315073 ncrna LOC106149308 uncharacterized LOC106149308 NW_004955442 9387419 9390552 - 106149308 AGCD01037679;GBDI01380847;XR_001235394 MODEL 8893952 ncrna LOC102018193 uncharacterized LOC102018193 NW_004955492 8662680 8668236 + 102018193 AGCD01060823;GBCB01028339;XR_264060 MODEL 8885043 protein-coding Irx1 iroquois homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN metanephros development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); congenital heart disease (ortholog) NW_004955504 2072540 2099781 + 102022205 AGCD01064854;AGCD01064855;GBDK01079393;XM_013505917 XP_013361371 MODEL 8834295 protein-coding LOC102006032 ankyrin repeat and KH domain-containing protein 1 NW_004955418 134451 259259 - 102006032 AGCD01018668;AGCD01018669;AGCD01018670;GBDI01137461;XM_005382032;XM_005382034;XM_005382037;XM_013512890;XM_013512892;XM_013512893;XM_013512894;XM_013512895;XM_013512896;XM_013512897 XP_005382089;XP_005382091;XP_005382094;XP_013368344;XP_013368346;XP_013368347;XP_013368348;XP_013368349;XP_013368350;XP_013368351 MODEL 8736626 protein-coding LOC102022876 putative 60S ribosomal protein L37a NW_004955452 8163567 8163946 + 102022876 AGCD01044211;GBBH01160675;XM_005394976 XP_005395033 MODEL 9061438 protein-coding Nectin1 nectin cell adhesion molecule 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); cell adhesion mediator activity (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN axon guidance (ortholog); camera-type eye morphogenesis (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH cleft lip (ortholog); cleft lip-palate-ectodermal dysplasia syndrome (ortholog); cleft palate (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); axon (ortholog) NW_004955412 20683007 20745069 - 102009814 AGCD01013012;GBDI01327713;XM_005378343 XP_005378400 MODEL 8881072 protein-coding LOC102003231 protocadherin beta-12 NW_004955415 12598599 12600263 - 102003231 AGCD01016205;GBDF01191900;XM_005381127 XP_005381184 MODEL 8959674 protein-coding Wdtc1 WD and tetratricopeptide repeats 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); glucose metabolic process (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog) NW_004955452 6519628 6581333 + 102028819 AGCD01044114;AGCD01044115;AGCD01044116;AGCD01044117;GBDF01050605;XM_005394896;XM_005394898 XP_005394953;XP_005394955 MODEL 39132187 rrna 5S_rRNA 5S ribosomal RNA 8837918 protein-coding Gpr146 G protein-coupled receptor 146 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cholesterol metabolic process (ortholog); defense response to virus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 8747499 8762141 + 102015294 AGCD01048531;GBCE01009732;XM_005397797;XM_005397798 XP_005397854;XP_005397855 MODEL 8865674 pseudo LOC102012558 non-histone chromosomal protein HMG-17 pseudogene NW_004955426 25793912 25801578 + 102012558 AGCD01026728 MODEL 8965312 protein-coding CUNH22orf15 chromosome unknown C22orf15 homolog ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955455 8474717 8478840 - 102012731 AGCD01045896;GBBH01228066;XM_005396423;XM_005396424;XM_013520434;XM_013520435;XM_013520436;XM_013520437;XM_013520438 XP_005396480;XP_005396481;XP_013375888;XP_013375889;XP_013375890;XP_013375891;XP_013375892 MODEL 39132405 snrna U6 U6 spliceosomal RNA 10298463 protein-coding LOC106147163 vomeronasal type-2 receptor 116-like NW_004955524 4271669 4318987 - 106147163 AGCD01068963;AGCD01068964;AGCD01068965;AGCD01068966;AGCD01068967;XM_013507205 XP_013362659 MODEL 8993717 protein-coding LOC102023243 serpin B9-like NW_004955465 10475882 10506105 + 102023243 AGCD01050510;GBDJ01011024;XM_005398919;XM_005398922;XM_005398923;XM_005398925;XM_005398926;XM_005398927;XM_013521820;XM_013521821;XM_013521822;XM_013521823 XP_005398976;XP_005398979;XP_005398980;XP_005398982;XP_005398983;XP_005398984;XP_013377274;XP_013377275;XP_013377276;XP_013377277 MODEL 8817137 protein-coding LOC102005343 cytochrome P450 2J2-like NW_004955457 13519513 13582133 + 102005343 AGCD01047047;AGCD01047048;AGCD01047049;GBCB01120042;XM_013520668 XP_013376122 MODEL 9006469 protein-coding Myh14 myosin heavy chain 14 ENCODES a protein that exhibits actin filament binding (ortholog); ATP binding (ortholog); microfilament motor activity (ortholog); INVOLVED IN actin filament-based movement (ortholog); actomyosin structure organization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); Autosomal Dominant Deafness 4 (ortholog); FOUND IN actomyosin (ortholog); axon (ortholog); brush border (ortholog) NW_004955559 796455 856082 - 102017171 AGCD01073612;AGCD01073613;AGCD01073614;AGCD01073615;AGCD01073616;AGCD01073617;GBDF01089768;GBDI01017650;XM_013509048 XP_013364502 MODEL 8801140 pseudo LOC102007529 pre-mRNA-splicing factor CWC22 homolog NW_004955465 13700490 13703481 - 102007529 AGCD01050618;AGCD01050619 MODEL 9042343 pseudo LOC102003606 probable ATP-dependent RNA helicase DDX6 pseudogene NW_004955607 367321 368195 + 102003606 AGCD01076984 MODEL 8947040 protein-coding Napepld N-acyl phosphatidylethanolamine phospholipase D ENCODES a protein that exhibits bile acid binding (ortholog); glycerophospholipase activity (ortholog); identical protein binding (ortholog); INVOLVED IN host-mediated modulation of intestinal microbiota composition (ortholog); N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); cervical cancer (ortholog); FOUND IN early endosome membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955410 8217684 8233302 - 102015181 AGCD01010738;AGCD01010739;GBCB01089347;GBCB01098895;XM_013510537 XP_013365991 MODEL 8952069 protein-coding LOC102006413 60S ribosomal protein L31-like NW_004955403 19401656 19402305 + 102006413 AGCD01002125;XM_005373402 XP_005373459 MODEL 8931454 protein-coding Bcap29 B cell receptor associated protein 29 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); protein localization to endoplasmic reticulum exit site (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955410 11934158 11988479 + 102006104 AGCD01010838;AGCD01010839;AGCD01010840;GBDF01083953;XM_005377284 XP_005377341 MODEL 8914831 protein-coding Sfxn2 sideroflexin 2 INVOLVED IN mitochondrial transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955485 7716916 7732122 - 102012098 AGCD01058672;GBCE01065073;XM_005403827;XM_005403828;XM_013504027;XM_013504028;XM_013504029;XM_013504030;XM_013504031;XM_013504033;XM_013504034;XM_013504035;XM_013504036;XR_001231068 XP_005403884;XP_005403885;XP_013359481;XP_013359482;XP_013359483;XP_013359484;XP_013359485;XP_013359487;XP_013359488;XP_013359489;XP_013359490 MODEL 39134405 misc_rna 7SK 7SK RNA 8712518 protein-coding LOC102007913 uncharacterized LOC102007913 NW_004955423 26618752 26622551 + 102007913 AGCD01024102;AGCD01024103;GBDF01148474;XM_005385372 XP_005385429 MODEL 8700555 protein-coding LOC102012146 3-alpha-hydroxysteroid sulfotransferase-like NW_004955609 372015 408109 - 102012146 AGCD01077059;AGCD01077060;GBDI01156067;XM_005414932 XP_005414989 MODEL 10066968 ncrna LOC106150100 uncharacterized LOC106150100 NW_004955464 2671479 2673194 - 106150100 AGCD01049965;GBDF01114972;XR_001236709 MODEL 8740892 protein-coding LOC102009003 glutamate receptor ionotropic, NMDA 2C NW_004956136 343 7674 - 102009003 AGCD01079116;GBCQ01125682;XM_005415170 XP_005415227 MODEL 8711720 ncrna LOC102023612 uncharacterized LOC102023612 NW_004955493 7795315 7798040 - 102023612 AGCD01061227;GBDF01039121;XR_001231264 MODEL 9047479 pseudo LOC102013643 DEP domain-containing protein 1A-like NW_004955433 16183789 16212486 - 102013643 AGCD01031790 MODEL 39131628 rrna 5S_rRNA 5S ribosomal RNA 9062409 protein-coding Mmp10 matrix metallopeptidase 10 INVOLVED IN regulation of cell migration (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); asthma (ortholog); contact dermatitis (ortholog) NW_004955412 5965388 5976353 - 102017208 AGCD01012660;GBDK01397735;XM_005377986 XP_005378043 MODEL 9034120 protein-coding Dbndd1 dysbindin domain containing 1 ASSOCIATED WITH stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955541 3462667 3465769 - 102022015 AGCD01071449;GBDK01196871;GBDK01196872;XM_013507966 XP_013363420 MODEL 9031945 protein-coding Galt galactose-1-phosphate uridylyltransferase ENCODES a protein that exhibits UDP-glucose:hexose-1-phosphate uridylyltransferase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN beta-D-galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); galactose metabolic process (ortholog); glycolytic process from galactose (ortholog); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH cataract (ortholog); classic galactosemia (ortholog); colon adenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955472 1487173 1490548 - 102021334 AGCD01053395;GBDK01079344;XM_005401046;XM_005401047;XM_013523020;XM_013523021;XM_013523022 XP_005401103;XP_005401104;XP_013378474;XP_013378475;XP_013378476 MODEL 8733588 protein-coding LOC102010185 olfactory receptor 4D10-like NW_004955511 4000616 4001551 + 102010185 AGCD01066486;XM_005408269 XP_005408326 MODEL 8830537 pseudo LOC102004994 U2 small nuclear ribonucleoprotein A' pseudogene NW_004955402 7571597 7573482 - 102004994 AGCD01000179;XR_259128 MODEL 8703620 protein-coding Plin5 perilipin 5 ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN cell activation (ortholog); gene expression (ortholog); intracellular signaling cassette (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955495 4406590 4414783 + 102008639 AGCD01061922;GBCB01043643;XM_013505191;XM_013505192 XP_013360645;XP_013360646 MODEL 10082238 ncrna LOC106149309 uncharacterized LOC106149309 NW_004955442 530303 542943 + 106149309 AGCD01037426;GBDI01328496;XR_001235395 MODEL 8709322 protein-coding Kitlg KIT ligand ENCODES a protein that exhibits cytokine activity (ortholog); stem cell factor receptor binding (ortholog); INVOLVED IN ectopic germ cell programmed cell death (ortholog); embryonic hemopoiesis (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); autosomal dominant nonsyndromic deafness 69 (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); filopodium (ortholog) NW_004955405 25816137 25969006 - 102012494 AGCD01005186;AGCD01005187;AGCD01005188;AGCD01005189;AGCD01005190;AGCD01005191;AGCD01005192;GBDJ01354458;XM_005374430;XM_005374432;XM_013518150;XM_013518152;XR_001235502 XP_005374487;XP_005374489;XP_013373604;XP_013373606 MODEL 8877551 protein-coding Gna11 G protein subunit alpha 11 ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); G protein activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN action potential (ortholog); cellular response to pH (ortholog); cranial skeletal system development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; angiotensin II signaling pathway via AT1 receptor; eicosanoid signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant hypocalcemia 2 (ortholog); CLOVES syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); heterotrimeric G-protein complex (ortholog) NW_004955495 5286891 5302631 - 102026441 AGCD01061993;GBCE01096719;GBDJ01021345;XM_005405852 XP_005405909 MODEL 39134107 misc_rna 7SK 7SK RNA 39131471 protein-coding IRX1 iroquois homeobox 1 8845882 protein-coding LOC102021537 heterogeneous nuclear ribonucleoprotein M-like NW_004955465 3678561 3680629 - 102021537 AGCD01050388;XM_013521806 XP_013377260 MODEL 9019508 pseudo LOC102018199 cyclin-G1 pseudogene NW_004955425 7631390 7649613 + 102018199 AGCD01025391 MODEL 8904550 protein-coding Atcay ATCAY kinesin light chain interacting caytaxin ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN mitochondrion distribution (ortholog); negative regulation of L-glutamine biosynthetic process (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); Cayman type cerebellar ataxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955495 5715943 5741202 + 102009730 AGCD01062022;AGCD01062023;AGCD01062024;GBBH01066796;XM_013505239;XM_013505240 XP_013360693;XP_013360694 MODEL 8835420 protein-coding LOC102010962 small proline-rich protein 3-like NW_004955592 393237 394484 - 102010962 AGCD01076311;GBDI01016409;XM_005414615 XP_005414672 MODEL 8731730 protein-coding Flvcr2 FLVCR choline and putative heme transporter 2 ENCODES a protein that exhibits choline binding (ortholog); choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); choline transport (ortholog); endothelial tip cell fate specification (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog); plasma membrane (ortholog) NW_004955612 46723 99012 + 102023420 AGCD01077180;GBDK01076389;XM_005414963;XM_005414964;XM_013510128;XM_013510129 XP_005415020;XP_005415021;XP_013365582;XP_013365583 MODEL 8912965 protein-coding Tslp thymic stromal lymphopoietin ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-7 receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Albuminuria (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955418 4041529 4045534 - 102025006 AGCD01018807;XM_005382342 XP_005382399 MODEL 9063907 protein-coding Hhat hedgehog acyltransferase ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); protein maturation (ortholog); protein palmitoylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chondrodysplasia-pseudohermaphroditism syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955489 1553580 1868088 - 102016278 AGCD01059842;AGCD01059843;AGCD01059844;AGCD01059845;AGCD01059846;AGCD01059847;AGCD01059848;AGCD01059849;AGCD01059850;AGCD01059851;GBBH01106877;GBBH01106882;XM_013504483 XP_013359937 MODEL 8992061 protein-coding Sobp sine oculis binding protein homolog ENCODES a protein that exhibits SUMO polymer binding (ortholog); INVOLVED IN cochlea development (ortholog); cognition (ortholog); inner ear morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); Impaired intellectual development, anterior maxillary protrusion, and strabismus (ortholog); FOUND IN nucleus (ortholog) NW_004955411 32745029 32898570 + 102023568 AGCD01012336;AGCD01012337;AGCD01012338;AGCD01012339;GBCB01000312;XM_013510791 XP_013366245 MODEL 8948621 ncrna LOC102007919 uncharacterized LOC102007919 NW_004955501 6607112 6613567 - 102007919 AGCD01064198;GBDF01156852;XR_264255 MODEL 8892690 protein-coding Nectin2 nectin cell adhesion molecule 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cellular anatomical entity morphogenesis (ortholog); cilium organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); atherosclerosis (ortholog); FOUND IN apical junction complex (ortholog); cell surface (ortholog); cell-cell contact zone (ortholog) NW_004955555 1959702 1985679 + 102027465 AGCD01073118;GBDF01009102;XM_005412475;XM_005412476 XP_005412532;XP_005412533 MODEL 39131384 protein-coding GPR146 G protein-coupled receptor 146 9067826 pseudo LOC102024609 zinc finger protein 277 pseudogene NW_004955525 3961128 3986485 + 102024609 AGCD01069164;AGCD01069165 MODEL 8853523 ncrna LOC102012559 uncharacterized LOC102012559 NW_004955427 8687167 8694960 + 102012559 AGCD01027076;GBDF01110884;XR_001234415;XR_261242 MODEL 39132407 snrna U6 U6 spliceosomal RNA 8900059 protein-coding Ctdsp2 CTD small phosphatase 2 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein phosphorylation (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog) NW_004955458 5523548 5549190 - 102013389 AGCD01047497;AGCD01047498;AGCD01047499;GBCB01020492;XM_005397421 XP_005397478 MODEL 8718309 protein-coding Hoxb2 homeobox B2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); dorsal/ventral pattern formation (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12693764 12697825 + 102004227 AGCD01043420;GBCQ01100488;XM_005394234;XM_005394235 XP_005394291;XP_005394292 MODEL 8938044 ncrna LOC102006033 uncharacterized LOC102006033 NW_004955481 9531180 9539647 + 102006033 AGCD01057102;GBDF01031476;XR_263796 MODEL 9044936 protein-coding Bmt2 base methyltransferase of 25S rRNA 2 homolog ENCODES a protein that exhibits protein-containing complex binding (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to methionine (ortholog); positive regulation of TORC1 signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955432 19046121 19107178 - 102003997 AGCD01031165;AGCD01031166;AGCD01031167;GBDF01192648;GBDJ01278833;XM_013516035 XP_013371489 MODEL 9054797 protein-coding LOC102003607 PRAME family member 12-like NW_004955615 28450 30897 - 102003607 AGCD01077247;XM_005414978 XP_005415035 MODEL 8723900 ncrna LOC102003232 uncharacterized LOC102003232 NW_004955416 2924029 2929842 + 102003232 AGCD01016863;GBDF01042362;XR_260349;XR_260350;XR_260351 MODEL 8741438 protein-coding LOC102006414 uncharacterized LOC102006414 NW_004956036 9 5036 + 102006414 AGCD01078919;XM_005415164 XP_005415221 MODEL 8732335 protein-coding Napg NSF attachment protein gamma ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955402 1888301 1908895 - 102019122 AGCD01000061;AGCD01000062;GBBH01092705;XM_005372585 XP_005372642 MODEL 9041449 ncrna LOC102025336 uncharacterized LOC102025336 NW_004955467 5045268 5051230 + 102025336 AGCD01051380;GBDF01145414;XR_263335;XR_263336 MODEL 39132190 rrna 5S_rRNA 5S ribosomal RNA 8753807 protein-coding Wee1 WEE1 G2 checkpoint kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN establishment of cell polarity (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955414 25281725 25299242 + 102030298 AGCD01015590;AGCD01015591;GBDF01053736;GBDI01132275;XM_005380269 XP_005380326 MODEL 8975645 protein-coding Irx2 iroquois homeobox 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN metanephros development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); proximal/distal pattern formation involved in metanephric nephron development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung disease (ortholog) NW_004955504 1456433 1460996 - 102021578 AGCD01064838;GBDI01138111;GBDK01079388;XM_005415306 XP_005415363 MODEL 8904017 ncrna LOC102013650 uncharacterized LOC102013650 NW_004955547 653716 654466 - 102013650 AGCD01072171;GBDI01166441;XR_001232231 MODEL 8715509 protein-coding CUNH22orf23 chromosome unknown C22orf23 homolog ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uveal melanoma (ortholog) NW_004955413 24291712 24300294 - 102012847 AGCD01014360;GBDF01011259;XM_005379234;XM_013511473 XP_005379291;XP_013366927 MODEL 8874983 protein-coding Ptpdc1 protein tyrosine phosphatase domain containing 1 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955515 3912495 4044999 + 102021161 AGCD01067307;AGCD01067308;AGCD01067309;AGCD01067310;AGCD01067311;AGCD01067312;AGCD01067313;GBDF01081967;XM_005408888;XM_005408890;XM_005408891;XM_005408892;XM_005408894 XP_005408945;XP_005408947;XP_005408948;XP_005408949;XP_005408951 MODEL 9026371 protein-coding LOC102003238 C-C motif chemokine 2-like NW_004955481 8924855 8926701 - 102003238 AGCD01057090;GBDK01146257;XM_005402836 XP_005402893 MODEL 8893517 ncrna LOC102005345 uncharacterized LOC102005345 NW_004955460 7260247 7263228 + 102005345 AGCD01048480;GBDF01208870;XR_263036 MODEL 8803770 pseudo LOC102022878 glutathione peroxidase 1-like NW_004955453 11001065 11001657 + 102022878 AGCD01044797 MODEL 39131351 protein-coding FANK1 fibronectin type III and ankyrin repeat domains 1 8820372 pseudo LOC102010186 disks large-associated protein 5 pseudogene NW_004955430 21698565 21699103 + 102010186 AGCD01029774 MODEL 8957674 pseudo LOC102024612 afadin- and alpha-actinin-binding protein pseudogene NW_004955543 1710564 1712276 - 102024612 AGCD01071628 MODEL 8980722 protein-coding Dennd11 DENN domain containing 11 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955494 1868793 1921919 + 102007028 AGCD01061424;AGCD01061425;AGCD01061426;AGCD01061427;AGCD01061428;AGCD01061429;GBBH01156369;XM_013504920 XP_013360374 MODEL 8960409 pseudo LOC102007532 60S ribosomal protein L6 pseudogene NW_004955412 12501193 12501804 - 102007532 AGCD01012820 MODEL 8713648 protein-coding Plk1 polo like kinase 1 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); centrosome cycle (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); colorectal cancer (ortholog); COVID-19 (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955493 2206353 2217231 + 102023160 AGCD01060935;GBCQ01178810;XM_005405103 XP_005405160 MODEL 9016108 protein-coding Myh15 myosin heavy chain 15 INVOLVED IN extraocular skeletal muscle development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog) NW_004955427 9257716 9400526 - 102016936 AGCD01027095;AGCD01027096;AGCD01027097;AGCD01027098;AGCD01027099;AGCD01027100;GBDK01042320;XM_013515043 XP_013370497 MODEL 39134108 misc_rna 7SK 7SK RNA 8742257 protein-coding Bcap31 B cell receptor associated protein 31 ENCODES a protein that exhibits MHC class I protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of ERAD pathway (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH deafness, dystonia, and cerebral hypomyelination (ortholog); Developmental Disabilities (ortholog); Failure to Thrive (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955580 429223 459168 - 102015790 AGCD01075606;AGCD01075607;GBBH01032180;XM_005414141 XP_005414198 MODEL 39134406 misc_rna 7SK 7SK RNA 8816396 protein-coding Nxpe3 neurexophilin and PC-esterase domain family member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); lymphoma (ortholog) NW_004955427 3256305 3320525 + 102004502 AGCD01026932;AGCD01026933;AGCD01026934;GBDF01190348;XM_005386334;XM_005386335;XM_005386336;XM_013515083;XM_013515084 XP_005386391;XP_005386392;XP_005386393;XP_013370537;XP_013370538 MODEL 9066198 ncrna LOC102009007 uncharacterized LOC102009007 NW_004955404 50480603 50488989 + 102009007 AGCD01004531;GBDF01057260;XR_259345 MODEL 39131629 rrna 5S_rRNA 5S ribosomal RNA 8808194 protein-coding Ate1 arginyltransferase 1 ENCODES a protein that exhibits arginyl-tRNA--protein transferase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); protein arginylation (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955477 126626 281898 - 102013604 AGCD01055479;AGCD01055480;AGCD01055481;AGCD01055482;AGCD01055483;AGCD01055484;AGCD01055485;GBBH01101397;XM_005401911;XM_005401912;XM_005401913;XM_005401914;XM_005401915;XM_005401916 XP_005401968;XP_005401969;XP_005401970;XP_005401971;XP_005401972;XP_005401973 MODEL 9017189 protein-coding Flywch1 FLYWCH-type zinc finger 1 ENCODES a protein that exhibits transcription coactivator binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 14392901 14419178 - 102012692 AGCD01037815;AGCD01037816;GBDJ01238933;XM_005391393;XM_005391394;XM_013517968;XM_013517969;XM_013517970;XM_013517971;XM_013517972;XM_013517973;XM_013517974;XM_013517975;XM_013517976 XP_005391450;XP_005391451;XP_013373422;XP_013373423;XP_013373424;XP_013373425;XP_013373426;XP_013373427;XP_013373428;XP_013373429;XP_013373430 MODEL 10346100 ncrna LOC106150101 uncharacterized LOC106150101 NW_004955464 12711358 12726752 + 106150101 AGCD01050219;AGCD01050220;AGCD01050221;XR_001236715 MODEL 8833984 protein-coding Nectin3 nectin cell adhesion molecule 3 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); cell adhesion molecule binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell-cell adhesion (ortholog); cochlea morphogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); axon (ortholog) NW_004955427 11639942 11731910 + 102019088 AGCD01027192;AGCD01027193;AGCD01027194;GBDF01003170;XM_005386610 XP_005386667 MODEL 8844985 pseudo LOC102012564 zinc finger CCHC domain-containing protein 9-like NW_004955506 4557255 4572734 + 102012564 AGCD01065339;AGCD01065340 MODEL 8702991 protein-coding LOC102007924 olfactory receptor 5B12-like NW_004955511 3402858 3403802 + 102007924 AGCD01066460;XM_005408265 XP_005408322 MODEL 10146769 ncrna LOC106149310 uncharacterized LOC106149310 NW_004955442 7414126 7423665 + 106149310 AGCD01037624;GBCE01113848;XR_001235397;XR_001235398 MODEL 8917654 ncrna LOC102021541 uncharacterized LOC102021541 NW_004955412 24094867 24096661 + 102021541 AGCD01013110;GBDF01192647;XR_260020 MODEL 8916034 pseudo LOC102010187 glycerol-3-phosphate acyltransferase 3 pseudogene NW_004955512 1355820 1356600 + 102010187 AGCD01066640 MODEL 8782463 protein-coding Sfxn3 sideroflexin 3 ENCODES a protein that exhibits L-serine transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial transmembrane transport (ortholog); one-carbon metabolic process (ortholog); serine import into mitochondrion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955485 9157657 9165243 - 102028972 AGCD01058748;AGCD01058749;GBBH01035640;GBBH01035644;XM_005403880 XP_005403937 MODEL 8818527 ncrna LOC102006036 uncharacterized LOC102006036 NW_004955421 23412284 23447843 + 102006036 AGCD01022183;GBCQ01089850;XR_001233831;XR_260822 MODEL 8776744 protein-coding LOC102023613 taste receptor type 2 member 41-like NW_004955494 115686 185165 - 102023613 AGCD01061355;AGCD01061356;AGCD01061357;AGCD01061358;AGCD01061359;AGCD01061360;AGCD01061361;AGCD01061362;AGCD01061363;AGCD01061364;AGCD01061365;AGCD01061366;AGCD01061367;AGCD01061368;GBDF01288832;XM_013504913 XP_013360367 MODEL 8727496 ncrna LOC102010963 uncharacterized LOC102010963 NW_004955450 6116015 6122123 - 102010963 AGCD01042519;GBDF01296262;XR_262533 MODEL 8916565 ncrna LOC102006417 uncharacterized LOC102006417 NW_004955404 45816780 45821911 + 102006417 AGCD01004453;GBDF01094431;XR_259341 MODEL 39132192 rrna 5S_rRNA 5S ribosomal RNA 10118772 ncrna LOC106147164 uncharacterized LOC106147164 NW_004955524 2592259 2593048 - 106147164 AGCD01068823;GBDJ01164425;XR_001231943 MODEL 8987495 protein-coding Dbndd2 dysbindin domain containing 2 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); ERK1 and ERK2 cascade (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); lysosome (ortholog) NW_004955445 11931996 11936534 - 102007713 AGCD01039726;AGCD01039727;GBCB01004423;XM_013518316;XM_013518317 XP_013373770;XP_013373771 MODEL 8783935 ncrna LOC102023244 uncharacterized LOC102023244 NW_004955466 4629522 4635286 - 102023244 AGCD01050834;GBDI01209682;XR_263289 MODEL 9006080 protein-coding Gamt guanidinoacetate N-methyltransferase ENCODES a protein that exhibits guanidinoacetate N-methyltransferase activity (ortholog); identical protein binding (ortholog); S-adenosylmethionine-dependent methyltransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); creatine biosynthetic process (ortholog); embryonic liver development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; creatine metabolic pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); autistic disorder (ortholog); cerebral creatine deficiency syndrome (ortholog) NW_004955495 6536541 6539424 + 102005271 AGCD01062085;GBDF01044865;XM_005405974;XR_264162;XR_264163 XP_005406031 MODEL 8976725 ncrna LOC102004995 uncharacterized LOC102004995 NW_004955403 8923034 8930408 - 102004995 AGCD01001897;AGCD01001898;GBDF01159890;XR_259164 MODEL 9033867 protein-coding Tsn translin ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN RISC complex assembly (ortholog); siRNA processing (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); endoribonuclease complex (ortholog); nucleoplasm (ortholog) NW_004955459 8285442 8299329 - 102012835 AGCD01048139;GBDJ01275284;XM_005397637 XP_005397694 MODEL 39131630 rrna 5S_rRNA 5S ribosomal RNA 8760357 protein-coding Gpr148 G protein-coupled receptor 148 FOUND IN plasma membrane (ortholog) NW_004955459 227998 237053 + 102004459 AGCD01047929;GBDF01148299;XM_005397702 XP_005397759 MODEL 8853652 protein-coding Wee2 WEE2 oocyte meiosis inhibiting kinase INVOLVED IN female meiotic nuclear division (ortholog); female pronucleus assembly (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH Oocyte Maturation Defect 5 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955494 1836909 1869384 - 102015022 AGCD01061424;GBDJ01283231;XM_013505022 XP_013360476 MODEL 8886798 protein-coding CUNH22orf31 chromosome unknown C22orf31 homolog ASSOCIATED WITH cervical cancer (ortholog) NW_004955455 3290397 3302619 - 102024977 AGCD01045620;AGCD01045621;GBCE01031667;XM_013520305 XP_013375759 MODEL 8911633 protein-coding Kiz kizuna centrosomal protein ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN spindle organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); fundus dystrophy (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955415 28991766 29078796 + 102022811 AGCD01016647;GBDF01002805;XM_005380949;XM_005380950;XM_013512366 XP_005381006;XP_005381007;XP_013367820 MODEL 8840680 protein-coding Ctdspl CTD small phosphatase like INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955421 4705664 4831463 + 102009724 AGCD01021700;AGCD01021701;AGCD01021702;GBBH01126080;GBDK01131136;XM_005383711 XP_005383768 MODEL 8923121 pseudo LOC102022881 40S ribosomal protein S12 pseudogene NW_004955454 2062707 2065137 + 102022881 AGCD01045006 MODEL 9000648 pseudo LOC102003239 coiled-coil domain-containing protein 90B, mitochondrial pseudogene NW_004955481 173004 173995 - 102003239 AGCD01056783 MODEL 8761090 ncrna LOC102005347 uncharacterized LOC102005347 NW_004955411 1520955 1525362 + 102005347 AGCD01011485;GBDF01208789;XR_259910 MODEL 9031877 pseudo LOC102018200 60S ribosomal protein L9-like NW_004955501 4266517 4318674 - 102018200 AGCD01064120;AGCD01064121;AGCD01064122;AGCD01064123;AGCD01064124 MODEL 9043028 ncrna LOC102007536 uncharacterized LOC102007536 NW_004955468 11575980 11579208 - 102007536 AGCD01052135;GBDF01249875;XR_263412;XR_263413 MODEL 8701661 pseudo LOC102007925 calmodulin-A pseudogene NW_004955430 14879789 14880358 + 102007925 AGCD01029580;XM_005387538 MODEL 8990427 protein-coding Nectin4 nectin cell adhesion molecule 4 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN negative regulation of natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Cognitive Dysfunction (ortholog); FOUND IN adherens junction (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955468 12841369 12858331 - 102025897 AGCD01052189;GBCQ01123131;XM_005400235;XM_005400236;XM_013522348;XM_013522349 XP_005400292;XP_005400293;XP_013377802;XP_013377803 MODEL 8819323 protein-coding Naprt nicotinate phosphoribosyltransferase ENCODES a protein that exhibits nicotinate phosphoribosyltransferase activity (ortholog); INVOLVED IN NAD+ biosynthetic process (ortholog); NAD+ biosynthetic process via the salvage pathway (ortholog); response to oxidative stress (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955454 2280223 2283613 - 102004672 AGCD01045015;GBCB01034857;XM_005395777 XP_005395834 MODEL 8856115 protein-coding Mmp11 matrix metallopeptidase 11 ENCODES a protein that exhibits metallopeptidase activity (ortholog); INVOLVED IN basement membrane organization (ortholog); collagen catabolic process (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955455 8458622 8464037 - 102011953 AGCD01045894;GBDF01307312;GBDJ01001621;XM_013520432;XM_013520433 XP_013375886;XP_013375887 MODEL 8797424 protein-coding Myh2 myosin heavy chain 2 INVOLVED IN muscle contraction (ortholog); response to muscle activity (ortholog); ASSOCIATED WITH congenital myopathy 6 (ortholog); genetic disease (ortholog); inclusion body myositis (ortholog); FOUND IN A band (ortholog); actomyosin contractile ring (ortholog); cell-cell junction (ortholog) NW_004955467 6655346 6681354 + 102005021 AGCD01051420;AGCD01051421;GBCB01007513;XM_005399744 XP_005399801 MODEL 8962040 protein-coding LOC102013653 carcinoembryonic antigen-related cell adhesion molecule 3 NW_004955555 1015663 1019840 - 102013653 AGCD01073055;GBDI01085734;XM_005415410 XP_005415467 MODEL 8742095 ncrna LOC102009009 uncharacterized LOC102009009 NW_004955452 14645767 14677079 + 102009009 AGCD01044474;AGCD01044475;AGCD01044476;GBDF01115467;XR_001236027 MODEL 9024203 protein-coding Nxpe4 neurexophilin and PC-esterase domain family member 4 NW_004955412 16146426 16203295 - 102015090 AGCD01012893;GBCQ01153872;XM_005378166;XM_005378167;XM_005378169;XM_013510943;XM_013510944 XP_005378223;XP_005378224;XP_005378226;XP_013366397;XP_013366398 MODEL 8726704 protein-coding Gna12 G protein subunit alpha 12 ENCODES a protein that exhibits D5 dopamine receptor binding (ortholog); G protein activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN cell differentiation (ortholog); embryonic digit morphogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Myocardial Ischemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN brush border membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955460 12534210 12628090 + 102011512 AGCD01048660;AGCD01048661;GBCB01042795;GBCQ01096239;XM_005397862 XP_005397919 MODEL 8858677 ncrna LOC102012147 uncharacterized LOC102012147 NW_004955652 44834 52840 - 102012147 AGCD01077823;AGCD01077824;GBBH01127077;XR_265180 MODEL 8798995 protein-coding Hoxb3 homeobox B3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); cartilage development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Diaphragmatic Hernia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12651229 12690941 + 102004999 AGCD01043417;AGCD01043418;AGCD01043419;AGCD01043420;GBCQ01152577;XM_013519409;XM_013519410;XM_013519411 XP_013374863;XP_013374864;XP_013374865 MODEL 8844424 ncrna LOC102024614 uncharacterized LOC102024614 NW_004955439 15058548 15077326 + 102024614 AGCD01035998;AGCD01035999;GBDF01042735;XR_261992 MODEL 8787743 protein-coding CUNH22orf39 chromosome unknown C22orf39 homolog INVOLVED IN negative regulation of long-term synaptic potentiation (ortholog); regulation of synaptic plasticity (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog); synaptic cleft (ortholog) NW_004955442 18570867 18575809 + 102008776 AGCD01038010;GBCB01112046;XM_005391778;XM_013517637 XP_005391835;XP_013373091 MODEL 8729092 protein-coding Fap fibroblast activation protein alpha ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN endothelial cell migration (ortholog); melanocyte apoptotic process (ortholog); melanocyte proliferation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophagus squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN apical part of cell (ortholog); basal part of cell (ortholog); cell surface (ortholog) NW_004955449 11623838 11694256 + 102018450 AGCD01042092;GBCE01096662;XM_005393316 XP_005393373 MODEL 9002411 protein-coding Gpr149 G protein-coupled receptor 149 INVOLVED IN antral ovarian follicle growth (ortholog); negative regulation of ovulation (ortholog); preantral ovarian follicle growth (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog) NW_004955448 5682132 5749533 - 102013230 AGCD01041373;AGCD01041374;AGCD01041375;AGCD01041376;GBCQ01030993;XM_005393060 XP_005393117 MODEL 8939103 protein-coding Hhatl hedgehog acyltransferase like INVOLVED IN negative regulation of N-terminal protein palmitoylation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955420 28110462 28117454 + 102025250 AGCD01021470;GBBH01218883;XM_005383532;XM_013513520;XM_013513521 XP_005383589;XP_013368974;XP_013368975 MODEL 8962580 protein-coding Plk2 polo like kinase 2 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); ATPase binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); long-term synaptic depression (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromatin (ortholog) NW_004955446 9671090 9676956 + 102008994 AGCD01040162;GBDF01005861;XM_005392671 XP_005392728 MODEL 8966528 ncrna LOC102010190 uncharacterized LOC102010190 NW_004955520 1134654 1136351 + 102010190 AGCD01068044;GBCQ01105007;XR_001231874;XR_264583 MODEL 9026248 protein-coding LOC102021543 sulfotransferase 6B1-like NW_004955413 17616399 17636221 - 102021543 AGCD01014159;AGCD01014160;GBDK01289164;XM_005379072 XP_005379129 MODEL 8870173 protein-coding Bcar1 BCAR1 scaffold protein, Cas family member ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); antigen receptor-mediated signaling pathway (ortholog); PARTICIPATES IN endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin-like growth factor signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast ductal carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955484 2223306 2258444 + 102022602 AGCD01058094;AGCD01058095;AGCD01058096;GBDF01288380;XM_005403450;XM_013503857;XM_013503858 XP_005403507;XP_013359311;XP_013359312 MODEL 8729416 pseudo LOC102006418 biorientation of chromosomes in cell division protein 1 pseudogene NW_004955452 7619927 7620452 - 102006418 AGCD01044178 MODEL 8713781 protein-coding Irx3 iroquois homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN atrioventricular bundle cell differentiation (ortholog); energy homeostasis (ortholog); His-Purkinje system cell differentiation (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung disease (ortholog); thymoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955433 11944890 11948372 - 102003053 AGCD01031656;GBCQ01004638;XM_005388313;XM_013516268 XP_005388370;XP_013371722 MODEL 39132409 snrna U6 U6 spliceosomal RNA 9065615 protein-coding LOC102007926 ATP-binding cassette sub-family G member 2-like NW_004955433 518685 589650 - 102007926 AGCD01031326;AGCD01031327;AGCD01031328;AGCD01031329;GBDJ01282723;XM_005388161 XP_005388218 MODEL 8802709 protein-coding Gan gigaxonin INVOLVED IN protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) NW_004955522 4035672 4096845 + 102004845 AGCD01068412;AGCD01068413;GBCQ01182912;XM_005409359;XM_013507099 XP_005409416;XP_013362553 MODEL 10388107 ncrna LOC106150102 uncharacterized LOC106150102 NW_004955464 11450268 11456604 - 106150102 AGCD01050154;GBDF01236342;XR_001236716 MODEL 8925741 protein-coding Mmp12 matrix metallopeptidase 12 ENCODES a protein that exhibits calcium ion binding (ortholog); collagen binding (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to virus (ortholog); elastin catabolic process (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Alport syndrome (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955412 6045146 6057112 - 102017855 AGCD01012664;GBDK01186040;XM_005377988 XP_005378045 MODEL 8777714 pseudo LOC102013661 cullin-5-like NW_004955444 12502917 12505534 + 102013661 AGCD01039075 MODEL 8955768 protein-coding Bmx BMX non-receptor tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); ruffle membrane (ortholog) NW_004955519 2638081 2689601 - 102015230 AGCD01067937;GBDI01107256;XM_005409162;XM_005409163;XM_013507003;XM_013507004 XP_005409219;XP_005409220;XP_013362457;XP_013362458 MODEL 10067508 protein-coding LOC106149311 uncharacterized LOC106149311 NW_004955442 14383218 14387882 + 106149311 AGCD01037815;GBDI01215533;XM_013517863;XM_013517864;XR_001235399;XR_001235400;XR_001235401 XP_013373317;XP_013373318 MODEL 9022679 protein-coding LOC102003608 RNA-binding protein 45 NW_004955403 18755127 18773060 - 102003608 AGCD01002110;AGCD01002111;AGCD01002112;GBCQ01097237;GBDJ01233290;XM_005373393;XM_005373395 XP_005373450;XP_005373452 MODEL 8968484 protein-coding LOC102025337 olfactory receptor 150-like NW_004955412 24941616 24942575 + 102025337 AGCD01013131;XM_005378642 XP_005378699 MODEL 8991424 pseudo LOC102005348 60S ribosomal protein L9-like NW_004955464 13057600 13058278 + 102005348 AGCD01050255 MODEL 8866514 protein-coding Ctdspl2 CTD small phosphatase like 2 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); embryonic skeletal system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN nucleus (ortholog) NW_004955416 10970487 11046179 + 102015840 AGCD01017169;AGCD01017170;AGCD01017171;GBDF01158268;XM_005381416;XM_005381418;XM_013512468 XP_005381473;XP_005381475;XP_013367922 MODEL 8948552 protein-coding Gna13 G protein subunit alpha 13 ENCODES a protein that exhibits D5 dopamine receptor binding (ortholog); G protein activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; G protein mediated signaling pathway via Galpha12/Galpha13 family; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Burkitt lymphoma (ortholog); disease of cellular proliferation (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955478 4510932 4552646 - 102003543 AGCD01055851;GBCB01042798;GBDF01080307;XM_005402134 XP_005402191 MODEL 9031301 pseudo LOC102018201 heat shock factor-binding protein 1 pseudogene NW_004955426 14759883 14760171 + 102018201 AGCD01026402;XM_005386144 MODEL 8795015 ncrna LOC102023617 uncharacterized LOC102023617 NW_004955426 24389136 24391879 + 102023617 AGCD01026678;GBDF01237121;XR_261220 MODEL 8926576 protein-coding LOC102006039 uncharacterized LOC102006039 NW_004955491 8353014 8354199 + 102006039 AGCD01060614;GBCB01010474;XM_013504570 XP_013360024 MODEL 39132193 rrna 5S_rRNA 5S ribosomal RNA 8873695 ncrna LOC102010965 uncharacterized LOC102010965 NW_004955403 1991898 2019275 + 102010965 AGCD01001728;GBDF01163403;XR_001233151;XR_259135 MODEL 8870085 protein-coding Fmc1 formation of mitochondrial complex V assembly factor 1 INVOLVED IN apoptotic mitochondrial changes (ortholog); dopaminergic neuron differentiation (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH Parkinson's Disease, Mitochondrial (ortholog); secondary Parkinson disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955494 3722359 3730217 - 102028308 AGCD01061481;GBDJ01007860;XM_005405445;XM_013504962;XM_013504963;XM_013504965 XP_005405502;XP_013360416;XP_013360417;XP_013360419 MODEL 9027417 protein-coding Atf1 activating transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); positive regulation of DNA replication (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN ATF1-ATF4 transcription factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955547 1263288 1299525 + 102017709 AGCD01072207;AGCD01072208;GBDF01044548;GBDF01044556;XM_013508455;XM_013508456 XP_013363909;XP_013363910 MODEL 39131631 rrna 5S_rRNA 5S ribosomal RNA 9047660 protein-coding Wfdc1 WAP four-disulfide core domain 1 INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of wound healing (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955564 22536 38091 - 102017517 AGCD01074187;GBDK01412209;XM_005413214;XM_005413215;XM_013509194;XM_013509195 XP_005413271;XP_005413272;XP_013364648;XP_013364649 MODEL 39134109 misc_rna 7SK 7SK RNA 8700930 protein-coding Myh4 myosin heavy chain 4 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); INVOLVED IN muscle contraction (ortholog); muscle structure development (ortholog); response to gravity (ortholog); ASSOCIATED WITH Right Ventricular Hypertrophy (ortholog); sciatic neuropathy (ortholog); FOUND IN myofibril (ortholog) NW_004955467 6719572 6744147 + 102005352 AGCD01051422;GBCB01088370;XM_005399365 XP_005399422 MODEL 8834627 ncrna LOC102012565 uncharacterized LOC102012565 NW_004955507 4294100 4350414 + 102012565 AGCD01065647;AGCD01065648;GBDF01133790;XR_001231617;XR_264382 MODEL 8774719 ncrna LOC102022882 uncharacterized LOC102022882 NW_004955407 27667270 27669931 - 102022882 AGCD01007555;GBDF01057641;XR_259590 MODEL 8856184 protein-coding Kl klotho ENCODES a protein that exhibits beta-glucuronidase activity (ortholog); fibroblast growth factor binding (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); determination of adult lifespan (ortholog); energy reserve metabolic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amenorrhea (ortholog); Animal Disease Models (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955431 12782913 12833215 - 102015879 AGCD01030271;AGCD01030272;GBCQ01000622;XM_013515718 XP_013371172 MODEL 8917130 protein-coding Dennd1a DENN domain containing 1A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); endocytosis (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); clathrin-coated vesicle membrane (ortholog); dendrite (ortholog) NW_004955419 4120095 4605002 + 102026324 AGCD01019754;AGCD01019755;AGCD01019756;AGCD01019757;AGCD01019758;AGCD01019759;AGCD01019760;GBDF01194053;XM_005382503;XM_013513192 XP_005382560;XP_013368646 MODEL 8746204 protein-coding Irx4 iroquois homeobox 4 INVOLVED IN establishment of animal organ orientation (ortholog); heart development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Cardiomegaly (ortholog); lymphoma (ortholog) NW_004955504 937152 940842 - 102009402 AGCD01064832;AGCD01064833;GBDF01086639;XM_013505866 XP_013361320 MODEL 8885269 protein-coding Socs1 suppressor of cytokine signaling 1 ENCODES a protein that exhibits insulin-like growth factor receptor binding (ortholog); kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN insulin signaling pathway; interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); alcoholic hepatitis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955442 7321337 7323109 + 102030005 AGCD01037623;GBCE01077934;XM_005391166 XP_005391223 MODEL 8969558 protein-coding Mmp13 matrix metallopeptidase 13 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); collagen binding (ortholog); INVOLVED IN bone mineralization (ortholog); bone morphogenesis (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); anodontia (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular region (ortholog); intercellular canaliculus (ortholog) NW_004955412 6106994 6118760 - 102018815 AGCD01012666;GBCE01001806;XM_005377992 XP_005378049 MODEL 10255388 ncrna LOC106147165 uncharacterized LOC106147165 NW_004955524 2661951 2663691 - 106147165 AGCD01068827;AGCD01068828;GBBH01171560;XR_001231945 MODEL 9068074 ncrna LOC102010191 uncharacterized LOC102010191 NW_004955521 1508637 1515821 + 102010191 AGCD01068187;GBDF01220340;XR_264600;XR_264602 MODEL 8824520 pseudo LOC102003610 DCN1-like protein 1 pseudogene NW_004955757 39 601 + 102003610 AGCD01078282 MODEL 9055526 ncrna LOC102005350 uncharacterized LOC102005350 NW_004955465 6890152 6891671 + 102005350 AGCD01050449;GBCB01123633;XR_263244 MODEL 8823546 pseudo LOC102023245 non-histone chromosomal protein HMG-14-like NW_004955412 26679167 26679592 - 102023245 AGCD01013208 MODEL 8796460 protein-coding Far1 fatty acyl-CoA reductase 1 ENCODES a protein that exhibits alcohol-forming long-chain fatty acyl-CoA reductase activity (ortholog); alcohol-forming very long-chain fatty acyl-CoA reductase activity (ortholog); INVOLVED IN ether lipid biosynthetic process (ortholog); glycerophospholipid biosynthetic process (ortholog); long-chain fatty-acyl-CoA metabolic process (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); Breast Cancer, Familial (ortholog); CATARACTS, SPASTIC PARAPARESIS, AND SPEECH DELAY (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955414 28938535 28996622 + 102020904 AGCD01015698;GBCB01059705;XM_005380328;XM_005380329;XM_013512007;XM_013512008;XM_013512009;XM_013512010;XM_013512011;XM_013512013 XP_005380385;XP_005380386;XP_013367461;XP_013367462;XP_013367463;XP_013367464;XP_013367465;XP_013367467 MODEL 9011370 protein-coding LOC102021545 neuroblastoma breakpoint family member 4-like NW_004955468 10000866 10052333 + 102021545 AGCD01052065;AGCD01052066;GBDK01417179;XM_005400141;XM_013522485;XM_013522486 XP_005400198;XP_013377939;XP_013377940 MODEL 8969718 pseudo LOC102023619 etoposide-induced protein 2.4 homolog pseudogene NW_004955427 20971315 20972479 + 102023619 AGCD01027429 MODEL 39132410 snrna U6 U6 spliceosomal RNA 8738868 protein-coding LOC102006044 uncharacterized LOC102006044 NW_004955423 26874436 26882443 - 102006044 AGCD01024108;GBDJ01373506;XM_013514385 XP_013369839 MODEL 8793967 ncrna LOC102009015 uncharacterized LOC102009015 NW_004955407 17180370 17193372 + 102009015 AGCD01007241;XR_259563 MODEL 39134407 misc_rna 7SK 7SK RNA 8929733 protein-coding LOC102024617 olfactory receptor 11H6-like NW_004955550 766566 767534 + 102024617 AGCD01072522;XM_005412138 XP_005412195 MODEL 8948716 pseudo LOC102013663 zinc finger protein 14 pseudogene NW_004955567 1589726 1604507 - 102013663 AGCD01074484;XM_005413380 MODEL 8723910 pseudo LOC102003240 bridging integrator 2-like NW_004955418 22080594 22081909 - 102003240 AGCD01019279 MODEL 8823749 protein-coding Bnc1 basonuclin zinc finger protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); rDNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); positive regulation of epithelial cell proliferation (ortholog); positive regulation of oocyte maturation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); cervical cancer (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955416 13428760 13440837 + 102003125 AGCD01017223;GBBH01128516;XM_005381464 XP_005381521 MODEL 10102463 protein-coding Ctf1 cardiotrophin 1 ENCODES a protein that exhibits cytokine activity (ortholog); leukemia inhibitory factor receptor binding (ortholog); INVOLVED IN cardiac muscle cell apoptotic process (ortholog); cardiac muscle hypertrophy (ortholog); leukemia inhibitory factor signaling pathway (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog) NW_004955493 7735996 7737559 + 106146727 AGCD01061222;GBCE01176310;GBDI01227883;XM_013504887 XP_013360341 MODEL 9031396 protein-coding Napsa napsin A aspartic peptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN membrane protein proteolysis (ortholog); surfactant homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN alveolar lamellar body (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955559 769555 777970 + 102022026 AGCD01073611;GBCQ01000420;XM_005412795 XP_005412852 MODEL 9052787 protein-coding Nedd1 NEDD1 gamma-tubulin ring complex targeting factor ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955405 33066734 33109750 + 102012153 AGCD01005352;AGCD01005353;GBDF01005946;XM_005374503 XP_005374560 MODEL 8765235 protein-coding Dbnl drebrin like ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN neuron projection morphogenesis (ortholog); podosome assembly (ortholog); postsynaptic actin cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955456 7912827 7924373 - 102024530 AGCD01046435;GBDF01153971;XM_005396684 XP_005396741 MODEL 8707690 ncrna LOC102004996 uncharacterized LOC102004996 NW_004955451 5008763 5013506 + 102004996 AGCD01043159;GBDF01208277;XR_001235984;XR_262579 MODEL 8755462 protein-coding Plk3 polo like kinase 3 ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955464 13419562 13424104 - 102006642 AGCD01050275;GBBH01135021;GBCE01163140;XM_013521627;XM_013521628 XP_013377081;XP_013377082 MODEL 8892349 protein-coding Tsnare1 t-SNARE domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955454 743022 1203483 - 102020635 AGCD01044960;AGCD01044961;AGCD01044962;AGCD01044963;AGCD01044964;AGCD01044965;GBDF01179211;XM_013520010 XP_013375464 MODEL 39132196 rrna 5S_rRNA 5S ribosomal RNA 8717167 ncrna LOC102007929 uncharacterized LOC102007929 NW_004955435 5612861 5627141 + 102007929 AGCD01032892;AGCD01032893;GBDF01113740;XR_261663 MODEL 8808908 ncrna LOC102005351 uncharacterized LOC102005351 NW_004955466 1620912 1640471 + 102005351 AGCD01050714;GBDI01342166;XR_001236819;XR_001236820;XR_263277 MODEL 8972326 pseudo LOC102012149 high mobility group protein B1-like NW_004958114 9 505 + 102012149 AGCD01081510 MODEL 9020582 protein-coding Cth cystathionine gamma-lyase ENCODES a protein that exhibits cystathionine gamma-lyase activity (ortholog); identical protein binding (ortholog); L-cystine L-cysteine-lyase (deaminating) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glutathione metabolic process (ortholog); hydrogen sulfide biosynthetic process (ortholog); PARTICIPATES IN cystathioninuria pathway; cysteine metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); cataract (ortholog); FOUND IN cytosol (ortholog) NW_004955423 21542587 21567935 - 102005725 AGCD01023945;GBCQ01034035;XM_005385247 XP_005385304 MODEL 39134110 misc_rna 7SK 7SK RNA 8750241 protein-coding LOC102007537 apolipoprotein L3-like NW_004955413 22864060 22868517 - 102007537 AGCD01014318;XM_013511300 XP_013366754 MODEL 8757153 protein-coding Socs2 suppressor of cytokine signaling 2 ENCODES a protein that exhibits growth hormone receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); growth hormone receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); ductal carcinoma in situ (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) NW_004955405 30349956 30623849 + 102026937 AGCD01005272;AGCD01005273;AGCD01005274;AGCD01005275;AGCD01005276;GBDI01171449;XM_005374469;XM_005374471;XM_005374472;XM_013518322;XM_013518324;XM_013518330;XM_013518331;XM_013518336;XM_013518338;XM_013518343;XM_013518347;XM_013518351;XM_013518360;XM_013518369;XM_013518373;XM_013518380;XR_001235628;XR_001235629 XP_005374526;XP_005374528;XP_005374529;XP_013373776;XP_013373778;XP_013373784;XP_013373785;XP_013373790;XP_013373792;XP_013373797;XP_013373801;XP_013373805;XP_013373814;XP_013373823;XP_013373827;XP_013373834 MODEL 39131316 protein-coding WFDC1 WAP four-disulfide core domain 1 8763459 protein-coding Ptpmt1 protein tyrosine phosphatase mitochondrial 1 ENCODES a protein that exhibits phosphatidylglycerophosphatase activity (ortholog); phosphatidylinositol-5-phosphate phosphatase activity (ortholog); INVOLVED IN cardiolipin biosynthetic process (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; inositol metabolic pathway; ASSOCIATED WITH Neurodevelopmental disorder with ataxia and brain abnormalities (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955422 723236 724761 - 102007132 AGCD01022432;GBBH01076389;GBCQ01018067;XM_005384942 XP_005384999 MODEL 8777252 ncrna LOC102022884 uncharacterized LOC102022884 NW_004955456 16036632 16057110 - 102022884 AGCD01046684;AGCD01046685;AGCD01046686;GBCB01078517;XR_001236358 MODEL 8906879 protein-coding Klb klotho beta ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH amenorrhea (ortholog); hepatocellular carcinoma (ortholog); hypogonadotropic hypogonadism (ortholog) NW_004955443 7917047 7954390 - 102003702 AGCD01038301;AGCD01038302;AGCD01038303;AGCD01038304;GBDF01193281;GBDI01383332;XM_013518072 XP_013373526 MODEL 8999558 protein-coding Hhex hematopoietically expressed homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding, bending (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); steatotic liver disease (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955425 737506 742775 - 102013736 AGCD01025198;GBCE01089159;GBDJ01389317;XM_005386084 XP_005386141 MODEL 8998512 protein-coding Dennd1b DENN domain containing 1B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endocytic recycling (ortholog); positive regulation of GTPase activity (ortholog); positive regulation of T-helper 2 cell cytokine production (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog) NW_004955406 34021508 34241735 - 102030037 AGCD01006496;AGCD01006497;AGCD01006498;GBCB01075374;GBDI01111475;XM_013521889 XP_013377343 MODEL 8878886 protein-coding Gpr15 G protein-coupled receptor 15 ENCODES a protein that exhibits coreceptor activity (ortholog); G protein-coupled receptor activity (ortholog); virus receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); symbiont entry into host cell (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); plasma membrane (ortholog) NW_004955427 115513 137557 + 102015745 AGCD01026808;GBDF01166895;XM_005386275;XM_005386277;XR_001234404;XR_001234405 XP_005386332;XP_005386334 MODEL 8725364 protein-coding Irx5 iroquois homeobox 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); embryonic cranial skeleton morphogenesis (ortholog); gonad development (ortholog); ASSOCIATED WITH anodontia (ortholog); Bone Fractures (ortholog); Cardiac Arrhythmias (ortholog) NW_004955433 12518786 12522744 + 102010086 AGCD01031665;AGCD01031666;GBBH01077587;GBDF01227473;XM_013516246 XP_013371700 MODEL 8858383 protein-coding Nxph1 neurexophilin 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synaptic cleft (ortholog) NW_004955432 15437646 15738233 + 102003050 AGCD01031064;AGCD01031065;AGCD01031066;AGCD01031067;AGCD01031068;AGCD01031069;AGCD01031070;AGCD01031071;AGCD01031072;AGCD01031073;AGCD01031074;XM_005388103 XP_005388160 MODEL 8796536 protein-coding CUNH22orf46 chromosome unknown C22orf46 homolog NW_004955413 27176899 27184107 + 102023682 AGCD01014497;GBDF01003456;XM_005379366 XP_005379423 MODEL 8897076 protein-coding LOC102006419 intestinal-type alkaline phosphatase-like NW_004955453 3542300 3545477 - 102006419 AGCD01044663;AGCD01044664;XM_013519762 XP_013375216 MODEL 8719989 protein-coding Ganab glucosidase II alpha subunit ENCODES a protein that exhibits alpha-glucosidase activity (ortholog); Glc2Man9GlcNAc2 oligosaccharide glucosidase activity (ortholog); glucan 1,3-alpha-glucosidase activity (ortholog); INVOLVED IN N-glycan processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant polycystic kidney disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); glucosidase II complex (ortholog); melanosome (ortholog) NW_004955599 556510 569891 + 102014306 AGCD01076659;AGCD01076660;GBCE01030836;XM_005414786;XM_005414787 XP_005414843;XP_005414844 MODEL 9036357 protein-coding LOC102023246 histone H4 NW_004955413 899257 901762 - 102023246 AGCD01013494;XM_005378712 XP_005378769 MODEL 8942737 protein-coding Fmn1 formin 1 ENCODES a protein that exhibits microtubule binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); forelimb morphogenesis (ortholog); gene expression (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955416 1365797 1774025 + 102026105 AGCD01016834;AGCD01016835;AGCD01016836;AGCD01016837;AGCD01016838;AGCD01016839;AGCD01016840;GBDF01084814;XM_005381169;XM_005381170;XM_005381171;XM_005381172;XM_005381173;XM_013512614 XP_005381226;XP_005381227;XP_005381228;XP_005381229;XP_005381230;XP_013368068 MODEL 8957084 protein-coding LOC102003611 BPI fold-containing family C protein-like NW_004957015 28 1202 - 102003611 AGCD01080411;XM_005415219 XP_005415276 MODEL 9001125 pseudo LOC102023620 60S ribosomal protein L23a pseudogene NW_004955507 3512576 3513217 + 102023620 AGCD01065629 MODEL 10346791 ncrna LOC106149312 uncharacterized LOC106149312 NW_004955405 18567091 18571178 - 106149312 AGCD01005021;AGCD01005022;XR_001235402;XR_001235405 MODEL 8940553 protein-coding LOC102025342 olfactory receptor 10T2 NW_004955468 10264851 10265798 - 102025342 AGCD01052075;XM_005400149 XP_005400206 MODEL 8739583 protein-coding Myh7b myosin heavy chain 7B INVOLVED IN regulation of calcium-mediated signaling (ortholog); regulation of CAMKK-AMPK signaling cascade (ortholog); regulation of cardiac muscle cell contraction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cardiac myofibril (ortholog) NW_004955422 26383440 26409559 - 102016168 AGCD01023288;GBCB01008133;XM_013514051 XP_013369505 MODEL 8850790 protein-coding LOC102012566 fatty acid desaturase 2-like protein FADS2P1 NW_004955511 1986298 2020040 + 102012566 AGCD01066386;AGCD01066387;GBCE01044968;XM_005407981 XP_005408038 MODEL 8873637 protein-coding Dock7 dedicator of cytokinesis 7 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN axonogenesis (ortholog); establishment of neuroblast polarity (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); astigmatism (ortholog); FOUND IN COP9 signalosome (ortholog); neuromuscular junction (ortholog) NW_004955423 27043621 27233710 + 102010707 AGCD01024113;AGCD01024114;AGCD01024115;AGCD01024116;GBCB01098443;XM_013514367 XP_013369821 MODEL 8738223 protein-coding Gna14 G protein subunit alpha 14 INVOLVED IN cell chemotaxis (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of inflammatory response (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; eicosanoid signaling pathway; endothelin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); CEREBROFACIAL ARTERIOVENOUS METAMERIC SYNDROME (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955512 1703750 1918321 + 102026138 AGCD01066649;AGCD01066650;AGCD01066651;AGCD01066652;AGCD01066653;GBBH01164261;XM_005408300 XP_005408357 MODEL 8916811 protein-coding Ganc glucosidase alpha, neutral C ENCODES a protein that exhibits alpha-1,4-glucosidase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955416 8990852 9063840 + 102019270 AGCD01017072;AGCD01017073;AGCD01017074;GBCE01133490;XM_005381328 XP_005381385 MODEL 10100602 protein-coding LOC106147166 microtubule-associated protein 1S-like NW_004955524 703117 704207 - 106147166 AGCD01068694;GBCE01098302;GBCQ01123891;XM_013507234 XP_013362688 MODEL 10064462 ncrna LOC106150103 uncharacterized LOC106150103 NW_004955465 569721 597369 - 106150103 AGCD01050309;GBDK01419155;XR_001236717;XR_001236718 MODEL 8761709 protein-coding Sfxn5 sideroflexin 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); INVOLVED IN citrate transport (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955424 12545985 12659238 + 102020027 AGCD01024614;AGCD01024615;AGCD01024616;AGCD01024617;GBCE01013411;XM_005385576;XM_005385577;XM_005385578;XM_013514690 XP_005385633;XP_005385634;XP_005385635;XP_013370144 MODEL 8721913 protein-coding Far2 fatty acyl-CoA reductase 2 ENCODES a protein that exhibits alcohol-forming very long-chain fatty acyl-CoA reductase activity (ortholog); INVOLVED IN long-chain fatty-acyl-CoA metabolic process (ortholog); ASSOCIATED WITH alopecia (ortholog); Breast Cancer, Familial (ortholog); dry eye syndrome (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955505 5585846 5724234 - 102015869 AGCD01065152;AGCD01065153;AGCD01065154;GBBH01106709;GBBH01112981;XM_013505936 XP_013361390 MODEL 8837390 protein-coding Plk4 polo like kinase 4 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN centriole replication (ortholog); cilium assembly (ortholog); de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); breast ductal carcinoma (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cleavage furrow (ortholog) NW_004955428 13548485 13566786 - 102005492 AGCD01027958;AGCD01027959;GBDF01044579;XM_005386739 XP_005386796 MODEL 8967288 pseudo LOC102006045 60S ribosomal protein L31 pseudogene NW_004955495 3574458 3577550 + 102006045 AGCD01061862;XM_005406145 MODEL 9045391 protein-coding Cthrc1 collagen triple helix repeat containing 1 ENCODES a protein that exhibits frizzled binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN cell migration (ortholog); cochlea morphogenesis (ortholog); establishment of planar polarity involved in neural tube closure (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955417 27520420 27525907 + 102021126 AGCD01018559;GBBH01218853;GBDF01208824;XM_013512691 XP_013368145 MODEL 9041803 ncrna LOC102012150 uncharacterized LOC102012150 NW_004955403 54885558 54890045 - 102012150 AGCD01003107;GBDF01110602;XR_259275 MODEL 9009288 protein-coding Atf2 activating transcription factor 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); cAMP response element binding protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN abducens nucleus development (ortholog); adipose tissue development (ortholog); amelogenesis (ortholog); PARTICIPATES IN adenosine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955449 332563 411218 + 102029572 AGCD01041762;AGCD01041763;AGCD01041764;AGCD01041765;GBDF01052391;XM_005393172 XP_005393229 MODEL 8862851 protein-coding Tsnax translin associated factor X ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); protein-containing complex binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN RISC complex assembly (ortholog); siRNA processing (ortholog); FOUND IN cytoplasm (ortholog); endoribonuclease complex (ortholog); nucleoplasm (ortholog) NW_004955492 7304982 7335512 - 102006784 AGCD01060784;AGCD01060785;AGCD01060786;GBDF01124616;XM_005404969;XM_013504735 XP_005405026;XP_013360189 MODEL 8771261 protein-coding LOC102024620 CD209 antigen-like protein E NW_004955563 1541169 1545686 + 102024620 AGCD01074152;GBDK01148494;XM_013509177;XM_013509178;XM_013509179 XP_013364631;XP_013364632;XP_013364633 MODEL 8989798 protein-coding LOC102003241 MARVEL domain-containing protein 3-like NW_004955484 4331566 4346570 + 102003241 AGCD01058209;AGCD01058210;GBCQ01038738;XM_013503949 XP_013359403 MODEL 8964348 pseudo LOC102022885 ubiquitin-like-conjugating enzyme ATG3 pseudogene NW_004955457 11528132 11540917 + 102022885 AGCD01046971;AGCD01046972;AGCD01046973 MODEL 9056772 protein-coding LOC102023621 aldo-keto reductase family 1 member C3 homolog NW_004955429 197972 335424 - 102023621 AGCD01028327;AGCD01028328;AGCD01028329;AGCD01028330;AGCD01028331;AGCD01028332;AGCD01028333;AGCD01028334;AGCD01028335;AGCD01028336;AGCD01028337;AGCD01028338;AGCD01028339;AGCD01028340;AGCD01028341;GBDK01017488;XM_005386857;XM_005386858;XM_013515394;XM_013515395 XP_005386914;XP_005386915;XP_013370848;XP_013370849 MODEL 9007053 protein-coding LOC102010966 uncharacterized LOC102010966 NW_004955450 12785559 12807014 + 102010966 AGCD01042708;AGCD01042709;GBDJ01327161;XM_013518835 XP_013374289 MODEL 8837438 protein-coding Dbp D-box binding PAR bZIP transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN liver development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) NW_004955559 1915424 1921322 + 102007061 AGCD01073681;AGCD01073682;GBBH01002125;GBDI01015879;XM_013508997 XP_013364451 MODEL 8800252 protein-coding Mmp14 matrix metallopeptidase 14 ENCODES a protein that exhibits endopeptidase activity (ortholog); integrin binding (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); astrocyte cell migration (ortholog); bone development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); adenocarcinoma (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); extracellular region (ortholog) NW_004955409 37438924 37448704 - 102004679 AGCD01010518;AGCD01010519;GBDJ01010120;XM_005377119;XM_005377120 XP_005377176;XP_005377177 MODEL 8742137 protein-coding LOC102010200 protein S100-A6-like NW_004955545 34876 36059 - 102010200 AGCD01071760;GBDI01224351;XM_005411403 XP_005411460 MODEL 9016285 protein-coding LOC102021546 NKG2-A/NKG2-B type II integral membrane protein-like NW_004955413 7564558 7569806 + 102021546 AGCD01013823;GBDK01253184;XM_005379621 XP_005379678 MODEL 8781922 ncrna LOC102005000 uncharacterized LOC102005000 NW_004956010 5739 9937 - 102005000 AGCD01078868;GBDF01006044;XR_265201 MODEL 8944101 protein-coding Myh9 myosin heavy chain 9 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ADP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); actin filament bundle distribution (ortholog); PARTICIPATES IN follicle-stimulating hormone signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); AIDS-Associated Nephropathy (ortholog); Albuminuria (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actomyosin (ortholog) NW_004955413 22881759 22972182 - 102018911 AGCD01014319;AGCD01014320;GBDI01017649;XM_005379158;XM_013511492 XP_005379215;XP_013366946 MODEL 39132411 snrna U6 U6 spliceosomal RNA 8840159 protein-coding Hoxb4 homeobox B4 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone marrow development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12661290 12665576 + 102015592 AGCD01043417;AGCD01043418;GBDK01056815;XM_005394601 XP_005394658 MODEL 39134408 misc_rna 7SK 7SK RNA 8833652 protein-coding LOC102007940 NKG2D ligand 1-like NW_004955439 11374237 11379696 + 102007940 AGCD01035901;AGCD01035902;AGCD01035903;GBCE01111523;GBDK01115668;XM_013517300 XP_013372754 MODEL 8856089 pseudo LOC102009017 60S ribosomal protein L14 pseudogene NW_004955408 1564719 1565405 - 102009017 AGCD01007965 MODEL 8775586 protein-coding LOC102007543 tripartite motif-containing protein 5-like NW_004955414 21602756 21610062 - 102007543 AGCD01015424;XM_013511732 XP_013367186 MODEL 8731343 protein-coding Wfdc2 WAP four-disulfide core domain 2 ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN club cell differentiation (ortholog); lung vasculature development (ortholog); positive regulation of lung alveolus development (ortholog); ASSOCIATED WITH Bronchiectasis and Nasal Polyposis (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955445 11723634 11730304 - 102004654 AGCD01039714;GBDF01122565;XM_005392423;XM_013518349 XP_005392480;XP_013373803 MODEL 8951897 protein-coding Ptpn1 protein tyrosine phosphatase non-receptor type 1 ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to angiotensin (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-cell lymphoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); early endosome (ortholog) NW_004955445 7754313 7819229 - 102025630 AGCD01039551;AGCD01039552;GBDF01190580;XM_005392314;XM_005392315;XM_005392316 XP_005392371;XP_005392372;XP_005392373 MODEL 8840593 protein-coding Narf nuclear prelamin A recognition factor ENCODES a protein that exhibits lamin binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN lamin filament (ortholog); nuclear lumen (ortholog); nucleolus (ortholog) NW_004955506 636533 657561 - 102007354 AGCD01065234;GBCB01025477;XM_005407190;XM_005407191;XM_005407192 XP_005407247;XP_005407248;XP_005407249 MODEL 8990732 protein-coding Nedd4 NEDD4 E3 ubiquitin protein ligase ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); channel inhibitor activity (ortholog); enzyme binding (ortholog); INVOLVED IN adaptive immune response (ortholog); blood vessel morphogenesis (ortholog); cellular response to UV (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell cortex (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955409 183645 281252 + 102008191 AGCD01009139;AGCD01009140;AGCD01009141;GBDI01291128;XM_005376602;XM_005376604;XM_005376605;XM_005376606;XM_013510263 XP_005376659;XP_005376661;XP_005376662;XP_005376663;XP_013365717 MODEL 9017381 protein-coding Hhip hedgehog interacting protein ENCODES a protein that exhibits hedgehog family protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); dorsal/ventral pattern formation (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955428 657918 745255 + 102028879 AGCD01027582;AGCD01027583;GBDK01181950;XM_005386630;XM_005386632;XM_013515324 XP_005386687;XP_005386689;XP_013370778 MODEL 8920877 protein-coding Gap43 growth associated protein 43 ENCODES a protein that exhibits lysophosphatidic acid binding (ortholog); phosphatidylinositol phosphate binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN axon choice point recognition (ortholog); axon guidance (ortholog); cell fate commitment (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colonic Neoplasms (ortholog); Experimental Seizures (ortholog); FOUND IN presynapse; axon (ortholog); cell periphery (ortholog) NW_004955427 15696549 15791279 + 102012561 AGCD01027300;AGCD01027301;AGCD01027302;GBBH01077564;XM_005386424;XR_261276;XR_261277 XP_005386481 MODEL 8868490 protein-coding Gpr150 G protein-coupled receptor 150 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Ovarian Neoplasms (ortholog) NW_004955418 16942505 16945580 - 102029294 AGCD01019138;AGCD01019139;GBCE01038451;XM_005382348 XP_005382405 MODEL 9008593 protein-coding Irx6 iroquois homeobox 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN detection of visible light (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog) NW_004955433 12889025 12895090 + 102004310 AGCD01031672;GBDF01290846;XM_005388314;XM_005388315 XP_005388371;XP_005388372 MODEL 39132197 rrna 5S_rRNA 5S ribosomal RNA 8834957 protein-coding Bnc2 basonuclin zinc finger protein 2 ENCODES a protein that exhibits DNA binding (ortholog); rDNA binding (ortholog); INVOLVED IN endochondral bone growth (ortholog); mesenchyme development (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nuclear body (ortholog) NW_004955434 19156746 19568983 - 102021793 AGCD01032583;AGCD01032584;AGCD01032585;AGCD01032586;AGCD01032587;AGCD01032588;AGCD01032589;GBDJ01273240;XM_005388715;XM_005388716;XM_005388717;XM_005388718;XM_005388719;XM_013516364;XM_013516365 XP_005388772;XP_005388773;XP_005388774;XP_005388775;XP_005388776;XP_013371818;XP_013371819 MODEL 8887172 protein-coding Nxph2 neurexophilin 2 ASSOCIATED WITH ovarian cyst (ortholog); urinary bladder cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955440 5697702 5700095 - 102016424 AGCD01036279;GBDK01361987;XM_013517435 XP_013372889 MODEL 9059166 protein-coding LOC102005354 T-cell surface glycoprotein YE1/48-like NW_004955413 7520787 7531148 + 102005354 AGCD01013822;GBDK01356301;XM_005378928 XP_005378985 MODEL 39134111 misc_rna 7SK 7SK RNA 8754136 protein-coding Sgca sarcoglycan alpha INVOLVED IN response to denervation involved in regulation of muscle adaptation (ortholog); skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); FOUND IN cell-cell junction (ortholog); dystroglycan complex (ortholog); membrane raft (ortholog) NW_004955451 11490891 11501618 - 102012394 AGCD01043355;AGCD01043356;GBCQ01015636;GBDI01122074;XM_013519105 XP_013374559 MODEL 9049939 protein-coding LOC102018205 carbonyl reductase [NADPH] 2 NW_004955506 1131548 1133857 + 102018205 AGCD01065246;GBDF01237291;XM_005407225 XP_005407282 MODEL 8989267 protein-coding LOC102013665 vomeronasal type-1 receptor 4-like NW_004955569 770136 772991 - 102013665 AGCD01074614;XM_013509361 XP_013364815 MODEL 8860695 pseudo LOC102007941 coiled-coil domain-containing protein 152-like NW_004955440 2711927 2712937 + 102007941 AGCD01036218 MODEL 8925671 protein-coding Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); postsynaptic actin cytoskeleton organization (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955404 12050225 12316842 - 102016775 AGCD01003450;AGCD01003451;AGCD01003452;AGCD01003453;GBDJ01089937;XM_005374078;XM_005374079;XM_005374081;XM_013516119 XP_005374135;XP_005374136;XP_005374138;XP_013371573 MODEL 10114796 ncrna LOC106149313 uncharacterized LOC106149313 NW_004955442 16390890 16405692 - 106149313 AGCD01037899;AGCD01037900;GBDF01111065;XR_001235403;XR_001235404 MODEL 8796837 protein-coding Bcar3 BCAR3 adaptor protein, NSP family member ENCODES a protein that exhibits kinase binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN endothelin receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); membrane (ortholog) NW_004955423 991046 1105033 + 102012102 AGCD01023426;AGCD01023427;AGCD01023428;GBCQ01122548;GBDI01163711;XM_013514437 XP_013369891 MODEL 8952536 pseudo LOC102025343 40S ribosomal protein S7 pseudogene NW_004955469 6328707 6329270 + 102025343 AGCD01052380 MODEL 8902306 protein-coding Ctif cap binding complex dependent translation initiation factor INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of translational initiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955402 33706824 33986476 + 102009780 AGCD01000842;AGCD01000843;AGCD01000844;GBDI01105779;XM_005372899;XM_005372901;XM_005372902;XM_013510556 XP_005372956;XP_005372958;XP_005372959;XP_013366010 MODEL 9060666 protein-coding Socs3 suppressor of cytokine signaling 3 ENCODES a protein that exhibits miRNA binding (ortholog); phosphotyrosine residue binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN erythropoietin signaling pathway; insulin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Burns (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog) NW_004955506 4222455 4225563 + 102007451 AGCD01065328;GBCE01031782;XM_005407378 XP_005407435 MODEL 8832315 ncrna LOC102012151 uncharacterized LOC102012151 NW_004955452 12802984 12851810 - 102012151 AGCD01044366;AGCD01044367;GBDF01073900;XR_001236023;XR_001236024 MODEL 8773177 protein-coding Klc1 kinesin light chain 1 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); intracellular protein transport (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) NW_004955538 2462491 2503398 + 102015145 AGCD01071127;GBBH01032249;XM_005410798;XM_005410799;XM_005410800;XM_005410801;XM_005410803;XM_005410805;XM_005410807;XM_013507851;XM_013507852;XR_001232088;XR_001232089 XP_005410855;XP_005410856;XP_005410857;XP_005410858;XP_005410860;XP_005410862;XP_005410864;XP_013363305;XP_013363306 MODEL 8714607 protein-coding Dennd1c DENN domain containing 1C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955495 3139411 3148389 + 102010278 AGCD01061828;GBBH01150256;XM_005405710;XM_005405711;XM_013505301;XM_013505302;XM_013505303;XM_013505304;XM_013505305 XP_005405767;XP_005405768;XP_013360755;XP_013360756;XP_013360757;XP_013360758;XP_013360759 MODEL 8737442 protein-coding Gna15 G protein subunit alpha 15 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955495 5254546 5270864 - 102025593 AGCD01061988;AGCD01061989;AGCD01061990;GBDK01237961;XM_005405849;XM_005405850 XP_005405906;XP_005405907 MODEL 9014271 ncrna LOC102006421 uncharacterized LOC102006421 NW_004955455 10924743 10925491 + 102006421 AGCD01045967;GBDF01002624;XR_262854 MODEL 8870333 ncrna LOC102010203 uncharacterized LOC102010203 NW_004955551 286892 305957 - 102010203 AGCD01072653;AGCD01072654;GBDK01406556;XR_001232275;XR_264923 MODEL 10218004 ncrna LOC106147167 uncharacterized LOC106147167 NW_004955408 36719493 36826754 + 106147167 AGCD01008986;AGCD01008987;AGCD01008988;AGCD01008989;GBCE01172684;XR_001231948 MODEL 10161952 protein-coding LOC106150104 translation initiation factor IF-2-like NW_004955465 11570585 11572537 - 106150104 AGCD01050527;GBCE01030369;GBDF01111956;XM_013521766 XP_013377220 MODEL 9040989 protein-coding CUNH2orf42 chromosome unknown C2orf42 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955424 14932677 14975332 + 102008871 AGCD01024665;AGCD01024666;AGCD01024667;AGCD01024668;AGCD01024669;AGCD01024670;AGCD01024671;GBDF01005965;XM_005385627;XM_005385628;XM_005385629;XM_005385630;XM_013514642;XM_013514644 XP_005385684;XP_005385685;XP_005385686;XP_005385687;XP_013370096;XP_013370098 MODEL 39132412 snrna U6 U6 spliceosomal RNA 8994423 protein-coding LOC102023249 T-cell surface glycoprotein CD1b3-like NW_004955468 10119937 10124011 + 102023249 AGCD01052067;GBBH01190249;XM_005400143;XM_005400144;XM_013522489 XP_005400200;XP_005400201;XP_013377943 MODEL 8947632 protein-coding Fmn2 formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 47 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955406 11358585 11666102 - 102018256 AGCD01005884;AGCD01005885;AGCD01005886;AGCD01005887;AGCD01005888;AGCD01005889;AGCD01005890;AGCD01005891;AGCD01005892;AGCD01005893;GBDK01276272;XM_005375457 XP_005375514 MODEL 8747424 pseudo LOC102003613 centrosomal protein of 57 kDa pseudogene NW_004955403 17238602 17239548 - 102003613 AGCD01002072 MODEL 8750554 pseudo LOC102012567 transcription initiation factor TFIID subunit 2 pseudogene NW_004955511 981095 984836 - 102012567 AGCD01066350 MODEL 8991138 protein-coding Atf3 activating transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); endoplasmic reticulum unfolded protein response (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); colon adenocarcinoma (ortholog); FOUND IN CHOP-ATF3 complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955406 4875672 4889173 - 102020412 AGCD01005709;GBDJ01179405;XM_005374741 XP_005374798 MODEL 8978489 protein-coding Dock8 dedicator of cytokinesis 8 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to chemokine (ortholog); dendritic cell migration (ortholog); immunological synapse formation (ortholog); ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); Acute Otitis Media (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955434 4849147 5050545 + 102011693 AGCD01032172;AGCD01032173;AGCD01032174;AGCD01032175;AGCD01032176;AGCD01032177;GBBH01005459;XM_005388589;XM_013516312 XP_005388646;XP_013371766 MODEL 8969745 ncrna LOC102024623 uncharacterized LOC102024623 NW_004955445 11329814 11335144 - 102024623 AGCD01039687;GBCE01071386;XR_001235598;XR_262329 MODEL 8704724 protein-coding Tsnaxip1 translin associated factor X interacting protein 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955484 8868022 8889089 - 102024010 AGCD01058398;AGCD01058399;AGCD01058400;GBDK01187927;XM_005403624;XM_005403625;XM_013503887;XM_013503888 XP_005403681;XP_005403682;XP_013359341;XP_013359342 MODEL 8980375 protein-coding LOC102023622 histone H1oo ENCODES a protein that exhibits nucleosomal DNA binding (ortholog); structural constituent of chromatin (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN female germ cell nucleus (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955429 17778193 17783307 - 102023622 AGCD01028866;AGCD01028867;GBDJ01408771;XM_005387262 XP_005387319 MODEL 8854492 ncrna LOC102010969 uncharacterized LOC102010969 NW_004955452 5395349 5427078 - 102010969 AGCD01044025;AGCD01044026;AGCD01044027;AGCD01044028;AGCD01044029;AGCD01044030;AGCD01044031;GBCB01057543;XR_001236120;XR_262656 MODEL 8746034 protein-coding Dbt dihydrolipoamide branched chain transacylase E2 ENCODES a protein that exhibits dihydrolipoamide branched chain acyltransferase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); L-isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH brain disease (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955435 4975664 5005126 - 102004512 AGCD01032868;GBCE01089296;GBCQ01065544;XM_005388795 XP_005388852 MODEL 8852335 protein-coding LOC102005001 keratin, type I cytoskeletal 14 NW_004955451 15903561 15907545 - 102005001 AGCD01043639;GBCE01032375;XM_005394411 XP_005394468 MODEL 8733110 protein-coding Gapdh glyceraldehyde-3-phosphate dehydrogenase ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); disordered domain specific binding (ortholog); enzyme binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cAMP/PKA signal transduction (ortholog); canonical glycolysis (ortholog); PARTICIPATES IN electron transport chain pathway; Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GAIT complex (ortholog) NW_004955413 4162467 4166783 + 102017556 AGCD01013601;GBDI01257956;XM_005378778 XP_005378835 MODEL 8886306 ncrna LOC102006049 uncharacterized LOC102006049 NW_004955425 7368402 7403190 + 102006049 AGCD01025384;GBDF01196098;XR_001234261;XR_001234262;XR_001234263;XR_001234264 MODEL 8959720 protein-coding Hoxb5 homeobox B5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 12637229 12650261 + 102005987 AGCD01043417;GBCQ01010135;XM_005394239;XM_013519412 XP_005394296;XP_013374866 MODEL 8984391 ncrna LOC102005357 uncharacterized LOC102005357 NW_004955413 23947369 23962983 + 102005357 AGCD01014341;AGCD01014342;AGCD01014343;GBCQ01160344;XR_260102 MODEL 8958561 pseudo LOC102013666 transmembrane 9 superfamily member 3-like NW_004955581 227506 229739 + 102013666 AGCD01075662 MODEL 9061329 ncrna LOC102003614 uncharacterized LOC102003614 NW_004955404 19125609 19150116 - 102003614 AGCD01003639;GBDK01198293;XR_259318 MODEL 8729879 ncrna LOC102022886 uncharacterized LOC102022886 NW_004955457 15851511 15856913 + 102022886 AGCD01047099;GBBH01168531;XR_262955 MODEL 8703700 protein-coding Ptpn11 protein tyrosine phosphatase non-receptor type 11 ENCODES a protein that exhibits cadherin binding (ortholog); cell adhesion molecule binding (ortholog); D1 dopamine receptor binding (ortholog); INVOLVED IN atrioventricular canal development (ortholog); axonogenesis (ortholog); Bergmann glial cell differentiation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Adducted Thumbs Syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955482 8934734 9031230 + 102009502 AGCD01057558;AGCD01057559;AGCD01057560;GBDF01081705;XM_005403196;XM_005403197;XM_005403198;XM_013503715;XM_013503717 XP_005403253;XP_005403254;XP_005403255;XP_013359169;XP_013359171 MODEL 8998849 pseudo LOC102012152 UMP-CMP kinase-like NW_004955405 25714441 25715377 + 102012152 AGCD01005179 MODEL 8795868 protein-coding Ctla4 cytotoxic T-lymphocyte associated protein 4 ENCODES a protein that exhibits receptor decoy activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); DNA damage response (ortholog); negative regulation of B cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); alcohol-associated liver disease (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955457 11028707 11034898 - 102021631 AGCD01046961;GBDI01208688;XM_005397012;XM_005397013;XM_005397014 XP_005397069;XP_005397070;XP_005397071 MODEL 8802879 protein-coding Mmp15 matrix metallopeptidase 15 INVOLVED IN endodermal cell differentiation (ortholog); response to estradiol (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Developmental Disease (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955433 15584206 15603162 + 102010299 AGCD01031760;GBDI01168794;XM_005388432 XP_005388489 MODEL 8805224 protein-coding Hhipl1 HHIP like 1 INVOLVED IN artery development (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955438 20936314 20951466 + 102017384 AGCD01035526;AGCD01035527;GBBH01126890;GBCE01175831;XM_013517245 XP_013372699 MODEL 8973471 protein-coding LOC102021547 olfactory receptor 52K1-like NW_004955414 20116732 20117685 + 102021547 AGCD01015358;XM_005380464 XP_005380521 MODEL 39132199 rrna 5S_rRNA 5S ribosomal RNA 8813366 protein-coding Nedd4l NEDD4 like E3 ubiquitin protein ligase ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); sodium channel inhibitor activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN negative regulation of potassium ion export across plasma membrane (ortholog); negative regulation of potassium ion transmembrane transport (ortholog); negative regulation of protein localization to cell surface (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955402 42339380 42688661 + 102007718 AGCD01001040;AGCD01001041;AGCD01001042;AGCD01001043;AGCD01001044;GBDF01258194;XM_005372981;XM_005372983;XM_005372986;XM_005372988;XM_013510994;XM_013510999;XM_013511005;XM_013511013 XP_005373038;XP_005373040;XP_005373043;XP_005373045;XP_013366448;XP_013366453;XP_013366459;XP_013366467 MODEL 9044804 protein-coding Isca1 iron-sulfur cluster assembly 1 INVOLVED IN protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH lung cancer (ortholog); multiple mitochondrial dysfunctions syndrome 5 (ortholog); FOUND IN iron-sulfur cluster assembly complex (ortholog); mitochondrial [4Fe-4S] assembly complex (ortholog); mitochondrion (ortholog) NW_004955432 1335481 1349852 + 102024152 AGCD01030592;GBDF01006902;XM_005387916 XP_005387973 MODEL 8936092 protein-coding Myl1 myosin light chain 1 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); muscle contraction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); congenital myopathy 14 (ortholog); Heart Injuries (ortholog); FOUND IN contractile muscle fiber (ortholog); myofibril (ortholog) NW_004955457 5147443 5167587 + 102028827 AGCD01046809;GBCB01002430;XM_005396945;XM_005396946 XP_005397002;XP_005397003 MODEL 8787493 protein-coding Bnip1 BCL2 interacting protein 1 ENCODES a protein that exhibits calcium-induced calcium release activity (ortholog); SNAP receptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic process in response to mitochondrial fragmentation (ortholog); endoplasmic reticulum membrane fusion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Down syndrome (ortholog); FOUND IN COPI-coated vesicle (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955408 25774305 25788802 + 102029267 AGCD01008652;GBDF01126859;XM_005376349 XP_005376406 MODEL 39134409 misc_rna 7SK 7SK RNA 8991758 protein-coding Klc2 kinesin light chain 2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); lysosome localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN ciliary rootlet (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 19047942 19057153 - 102019403 AGCD01022973;GBDJ01182843;XM_005384430;XM_013514008;XM_013514009 XP_005384487;XP_013369462;XP_013369463 MODEL 8960397 ncrna LOC102006426 uncharacterized LOC102006426 NW_004955409 9876860 10068894 - 102006426 AGCD01009449;AGCD01009450;AGCD01009451;AGCD01009452;AGCD01009453;AGCD01009454;AGCD01009455;AGCD01009456;GBDF01306880;XR_001232611;XR_001232612;XR_001232613 MODEL 39134112 misc_rna 7SK 7SK RNA 8827649 protein-coding Nxph3 neurexophilin 3 ENCODES a protein that exhibits signaling receptor binding (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955451 11985511 11989603 - 102024748 AGCD01043370;GBCB01052911;XM_005394209 XP_005394266 MODEL 10315020 protein-coding LOC106147168 translation initiation factor IF-2-like NW_004955524 955294 957029 - 106147168 AGCD01068730;GBCB01030724;GBDI01310612;XM_013507251 XP_013362705 MODEL 8871222 protein-coding Sgcb sarcoglycan beta INVOLVED IN cardiac muscle cell development (ortholog); gene expression (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2E (ortholog); cardiomyopathy (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) NW_004955447 18459562 18472367 + 102011377 AGCD01041174;AGCD01041175;GBDJ01180305;GBDK01317787;XM_013518513 XP_013373967 MODEL 8933148 protein-coding LOC102007544 seminal plasma acrosin inhibitor A1-like NW_004955415 5997416 6041627 + 102007544 AGCD01016005;AGCD01016006;AGCD01016007;AGCD01016008;AGCD01016009;GBDJ01337989;XM_005380645;XM_005380648;XM_005380649;XM_013512381;XM_013512382;XM_013512383;XM_013512384;XM_013512385 XP_005380702;XP_005380705;XP_005380706;XP_013367835;XP_013367836;XP_013367837;XP_013367838;XP_013367839 MODEL 8793096 protein-coding LOC102009018 up-regulator of cell proliferation NW_004955456 7974915 7999963 + 102009018 AGCD01046440;AGCD01046441;AGCD01046442;AGCD01046443;GBBH01208050;GBCE01137430;XM_013520521 XP_013375975 MODEL 8972611 pseudo LOC102018206 protein slowmo homolog 2 pseudogene NW_004955428 4184563 4185357 + 102018206 AGCD01027669 MODEL 8855280 protein-coding LOC102007943 keratin, type II cuticular Hb3 NW_004955547 2671303 2677998 - 102007943 AGCD01072294;GBDK01416954;XM_005411938 XP_005411995 MODEL 8847927 ncrna LOC102003244 uncharacterized LOC102003244 NW_004955486 8568818 8579925 + 102003244 AGCD01059151;GBDF01224300;XR_001231117;XR_001231118;XR_001231119;XR_263964 MODEL 8784868 protein-coding Wfdc3 WAP four-disulfide core domain 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955445 11501044 11512109 + 102029675 AGCD01039697;AGCD01039698;GBDF01119525;XM_005392415;XM_005392416;XM_005392418;XM_013518337;XM_013518339 XP_005392472;XP_005392473;XP_005392475;XP_013373791;XP_013373793 MODEL 9020661 protein-coding Farp2 FERM, ARH/RhoGEF and pleckstrin domain protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell adhesion (ortholog); hair cycle process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN cytoplasm (ortholog) NW_004955542 279489 395524 - 102007815 AGCD01071466;AGCD01071467;AGCD01071468;AGCD01071469;AGCD01071470;AGCD01071471;GBDJ01141645;XM_005411126;XM_013508096;XM_013508097;XM_013508098;XM_013508099;XM_013508100;XR_001232165 XP_005411183;XP_013363550;XP_013363551;XP_013363552;XP_013363553;XP_013363554 MODEL 8763440 protein-coding Nars1 asparaginyl-tRNA synthetase 1 ENCODES a protein that exhibits asparagine-tRNA ligase activity (ortholog); CCR3 chemokine receptor binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN asparaginyl-tRNA aminoacylation (ortholog); cell migration (ortholog); cerebral cortex development (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955402 41947592 41967136 - 102006408 AGCD01001028;GBCQ01005139;XM_005372977 XP_005373034 MODEL 8707331 protein-coding Bcas1 brain enriched myelin associated protein 1 INVOLVED IN myelination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); synapse (ortholog) NW_004955445 4951645 5049925 + 102015058 AGCD01039434;AGCD01039435;AGCD01039436;AGCD01039437;GBDJ01021202;XM_005392286;XM_013518334;XM_013518335 XP_005392343;XP_013373788;XP_013373789 MODEL 8951135 protein-coding Socs4 suppressor of cytokine signaling 4 INVOLVED IN negative regulation of epidermal growth factor-activated receptor activity (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955409 8522540 8539551 - 102027617 AGCD01009420;GBDK01193050;XM_005376754 XP_005376811 MODEL 8835135 protein-coding Atf4 activating transcription factor 4 ENCODES a protein that exhibits cAMP response element binding (ortholog); cAMP response element binding protein binding (ortholog); DNA binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH borna disease (ortholog); Hypoxia (ortholog); invasive ductal carcinoma (ortholog); FOUND IN ATF1-ATF4 transcription factor complex (ortholog); ATF4-CREB1 transcription factor complex (ortholog); centrosome (ortholog) NW_004955413 25406589 25408727 + 102004467 AGCD01014405;GBDJ01240104;XM_005379299 XP_005379356 MODEL 39131545 protein-coding GPR151 G protein-coupled receptor 151 10072529 protein-coding Dock8-as1 DOCK8 antisense RNA 1 ASSOCIATED WITH hyper IgE syndrome (ortholog) NW_004955434 4806409 4820650 - 106148961 AGCD01032169;AGCD01032170;AGCD01032171;GBCQ01133036;XM_013516293 XP_013371747 MODEL 9043618 ncrna LOC102003615 uncharacterized LOC102003615 NW_004955405 22571094 22618074 - 102003615 AGCD01005096;AGCD01005097;GBDF01187374;XR_001235464;XR_001235465 MODEL 8981975 protein-coding Dennd2a DENN domain containing 2A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955494 2768097 2831809 + 102021140 AGCD01061450;AGCD01061451;GBCE01111512;GBDK01245228;XM_013505021 XP_013360475 MODEL 8934582 protein-coding Gnai1 G protein subunit alpha i1 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); D2 dopamine receptor binding (ortholog); G protein activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; endothelin signaling pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amnestic disorder (ortholog); attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955410 5388184 5467022 - 102006987 AGCD01010684;AGCD01010685;GBDK01083366;XM_005377203 XP_005377260 MODEL 8995680 pseudo LOC102010208 protein kinase C iota type pseudogene NW_004955446 317633 321748 - 102010208 AGCD01039938;XM_005392595 MODEL 9061502 pseudo LOC102010970 dnaJ homolog subfamily B member 6-like NW_004955452 1116250 1116893 - 102010970 AGCD01043831 MODEL 8766831 pseudo LOC102005006 cyclin-G1 pseudogene NW_004955454 13232268 13233432 + 102005006 AGCD01045431 MODEL 39132413 snrna U6 U6 spliceosomal RNA 10316787 ncrna LOC106150105 uncharacterized LOC106150105 NW_004955465 11835697 11841804 + 106150105 AGCD01050536;GBDJ01200174;XR_001236722 MODEL 8939040 protein-coding LOC102023253 olfactory receptor 52E1-like NW_004955414 20701545 20702480 + 102023253 AGCD01015387;XM_013511764 XP_013367218 MODEL 10182225 ncrna LOC106149314 uncharacterized LOC106149314 NW_004955442 6846517 6848091 - 106149314 AGCD01037602;GBDK01148611;XR_001235408 MODEL 8971519 pseudo LOC102006050 nicotinamide phosphoribosyltransferase-like NW_004955426 5308768 5326304 - 102006050 AGCD01026121 MODEL 8844699 ncrna LOC102006427 uncharacterized LOC102006427 NW_004955459 3352170 3356325 - 102006427 AGCD01048013;XR_263014 MODEL 8962038 pseudo LOC102012571 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955434 15042346 15042821 - 102012571 AGCD01032459 MODEL 8866725 ncrna LOC102024625 uncharacterized LOC102024625 NW_004955448 8801047 8863960 - 102024625 AGCD01041450;AGCD01041451;AGCD01041452;GBDF01111681;XR_001235758;XR_262467 MODEL 8782493 protein-coding Plk5 polo like kinase 5 (inactive) ENCODES a protein that exhibits kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); defense response to tumor cell (ortholog); DNA damage response (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) NW_004955495 6415172 6424445 - 102028985 AGCD01062081;GBDJ01030988;XM_005405960;XM_013505279;XM_013505280;XM_013505281;XM_013505282;XM_013505283;XM_013505284;XM_013505285;XM_013505286;XM_013505287;XM_013505288;XM_013505289;XM_013505290 XP_005406017;XP_013360733;XP_013360734;XP_013360735;XP_013360736;XP_013360737;XP_013360738;XP_013360739;XP_013360740;XP_013360741;XP_013360742;XP_013360743;XP_013360744 MODEL 8948436 protein-coding LOC102023623 olfactory receptor 4C6-like NW_004955511 192846 193784 + 102023623 AGCD01066322;XM_005408181 XP_005408238 MODEL 8849411 protein-coding Tspan1 tetraspanin 1 INVOLVED IN protein stabilization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955464 12089589 12095000 - 102024321 AGCD01050180;GBBH01003796;XM_005398688 XP_005398745 MODEL 8797150 protein-coding Ctnna1 catenin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN apical junction assembly (ortholog); axon regeneration (ortholog); cellular response to indole-3-methanol (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); anchoring junction (ortholog) NW_004955418 1592555 1754423 - 102024007 AGCD01018724;AGCD01018725;AGCD01018726;AGCD01018727;GBCB01002985;XM_005382092;XM_013513007 XP_005382149;XP_013368461 MODEL 8865984 ncrna LOC102021550 uncharacterized LOC102021550 NW_004955415 14023924 14024705 + 102021550 AGCD01016284;GBDF01000432;XR_260290 MODEL 8747200 protein-coding Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ENCODES a protein that exhibits glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); glycolytic process (ortholog); spermatid development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cilium (ortholog); motile cilium (ortholog); sperm fibrous sheath (ortholog) NW_004955468 4757080 4773675 + 102021116 AGCD01051922;GBDF01008115;XM_005400061 XP_005400118 MODEL 9020574 protein-coding Nedd8 NEDD8 ubiquitin like modifier ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to camptothecin (ortholog); intracellular protein localization (ortholog); protein neddylation (ortholog); PARTICIPATES IN neddylation pathway; p53 signaling pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH alcohol-associated liver disease (ortholog); malignant astrocytoma (ortholog); Parkinson's disease (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 36173533 36182444 + 102005448 AGCD01010450;GBDF01043770;XM_005377023 XP_005377080 MODEL 8732617 pseudo LOC102025344 osteoclast-stimulating factor 1 pseudogene NW_004955414 9310670 9311289 - 102025344 AGCD01015017 MODEL 8860439 protein-coding Fmnl1 formin like 1 ENCODES a protein that exhibits actin filament binding (ortholog); GTPase activating protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin filament severing (ortholog); substrate-dependent cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); phagocytic vesicle (ortholog); plasma membrane (ortholog) NW_004955451 17876017 17893683 + 102026066 AGCD01043780;AGCD01043781;GBDI01002143;GBDJ01389975;XM_013519160 XP_013374614 MODEL 8839633 protein-coding Hoxb6 homeobox B6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12637221 12645749 + 102005332 AGCD01043417;GBDJ01011544;XM_005394238;XR_262598 XP_005394295 MODEL 10231719 pseudo LOC106147169 nuclease-sensitive element-binding protein 1 pseudogene NW_004955408 3316059 3316890 - 106147169 AGCD01008053 MODEL 8817967 protein-coding LOC102009019 glycosylation-dependent cell adhesion molecule 1-like NW_004955458 1841699 1848240 - 102009019 AGCD01047206;GBCB01051309;XM_005397231 XP_005397288 MODEL 8784974 protein-coding LOC102007547 cystatin-C-like NW_004955415 30648683 30672114 + 102007547 AGCD01016666;GBBH01008067;XM_005380977;XM_005380978;XM_013512401;XM_013512402;XM_013512403 XP_005381034;XP_005381035;XP_013367855;XP_013367856;XP_013367857 MODEL 8974543 protein-coding Nars2 asparaginyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits asparagine-tRNA ligase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Anophthalmia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955414 13410751 13528014 + 102003645 AGCD01015109;AGCD01015110;AGCD01015111;AGCD01015112;GBDF01042937;XM_005379814;XM_005379815;XM_005379816 XP_005379871;XP_005379872;XP_005379873 MODEL 39132200 rrna 5S_rRNA 5S ribosomal RNA 9023268 protein-coding Hhipl2 HHIP like 2 ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955520 1926220 1942928 + 102003370 AGCD01068069;XM_005409283 XP_005409340 MODEL 9066929 protein-coding Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); tRNA binding (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); tRNA processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); combined oxidative phosphorylation deficiency 14 (ortholog); Coxa Valga (ortholog); FOUND IN mitochondrion (ortholog) NW_004955465 7878115 8345749 - 102008076 AGCD01050469;AGCD01050470;AGCD01050471;AGCD01050472;AGCD01050473;GBBH01102302;XM_005398876;XM_005398877;XM_005398878;XM_013521840;XM_013521841;XM_013521842 XP_005398933;XP_005398934;XP_005398935;XP_013377294;XP_013377295;XP_013377296 MODEL 8887806 protein-coding LOC102003616 spidroin-1-like NW_004955405 39280354 39282100 - 102003616 AGCD01005498;XM_013519522 XP_013374976 MODEL 8750196 protein-coding Dbx1 developing brain homeobox 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ventral spinal cord interneuron specification (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955476 1018715 1022648 - 102005463 AGCD01055200;XM_005401719 XP_005401776 MODEL 8926223 protein-coding Isca2 iron-sulfur cluster assembly 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); lung cancer (ortholog); multiple mitochondrial dysfunctions syndrome (ortholog); FOUND IN iron-sulfur cluster assembly complex (ortholog); mitochondrial [4Fe-4S] assembly complex (ortholog); mitochondrion (ortholog) NW_004955523 1008246 1010030 - 102012237 AGCD01068487;GBCC01018685;GBCQ01037786;XM_013507150 XP_013362604 MODEL 39134410 misc_rna 7SK 7SK RNA 39134113 misc_rna 7SK 7SK RNA 8743582 pseudo LOC102010209 zinc finger CCCH domain-containing protein 15 pseudogene NW_004955446 1347899 1403306 + 102010209 AGCD01039963;AGCD01039964;AGCD01039965 MODEL 8981416 protein-coding Nxph4 neurexophilin 4 INVOLVED IN modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); synapse (ortholog) NW_004955458 4949679 4954627 + 102029713 AGCD01047446;GBDF01189920;XM_005397520 XP_005397577 MODEL 9020570 protein-coding LOC102005359 olfactory receptor 10J1-like NW_004955468 11069935 11070873 - 102005359 AGCD01052113;XM_005400167 XP_005400224 MODEL 8754400 ncrna LOC102023254 uncharacterized LOC102023254 NW_004955470 9123134 9132267 - 102023254 AGCD01052835;GBDF01224252;XR_263478 MODEL 8925149 pseudo LOC102022894 nucleophosmin pseudogene NW_004955410 25134204 25135364 + 102022894 AGCD01011143;XM_005377573 MODEL 10099496 ncrna LOC106149315 uncharacterized LOC106149315 NW_004955442 7089006 7093438 + 106149315 AGCD01037613;GBDK01386667;XR_001235409 MODEL 9053768 pseudo LOC102024626 ATP-binding cassette sub-family D member 3-like NW_004955448 13855290 13858175 + 102024626 AGCD01041607 MODEL 9015579 pseudo LOC102006428 transketolase pseudogene NW_004955459 3131676 3133894 + 102006428 AGCD01048009 MODEL 8861987 pseudo LOC102003248 60S ribosomal protein L17 pseudogene NW_004955422 7684598 7685166 + 102003248 AGCD01022643;XM_005384099 MODEL 8907098 protein-coding Wfdc5 WAP four-disulfide core domain 5 NW_004955445 12279799 12284819 + 102013123 AGCD01039749;GBDJ01360367;XM_005392453 XP_005392510 MODEL 8915486 pseudo LOC102012157 signal peptidase complex catalytic subunit SEC11A pseudogene NW_004955406 365288 365823 - 102012157 AGCD01005615 MODEL 8996427 protein-coding Ptpn12 protein tyrosine phosphatase non-receptor type 12 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); podosome (ortholog) NW_004955410 7556283 7599170 - 102011513 AGCD01010719;AGCD01010720;GBBH01228182;XM_005377213 XP_005377270 MODEL 8923470 protein-coding Gpr151 G protein-coupled receptor 151 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of synaptic vesicle exocytosis (ortholog); response to acidic pH (ortholog); FOUND IN cholinergic synapse (ortholog); presynaptic membrane (ortholog); synaptic vesicle membrane (ortholog) NW_004955415 7592958 7596586 + 102014238 AGCD01016046;XM_005380667 XP_005380724 MODEL 8935206 protein-coding Mmp16 matrix metallopeptidase 16 ENCODES a protein that exhibits metalloaminopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN bone development (ortholog); chondrocyte proliferation (ortholog); collagen catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955417 5298334 5545121 - 102008624 AGCD01017971;AGCD01017972;AGCD01017973;GBDF01180873;XM_005381755 XP_005381812 MODEL 8965225 protein-coding LOC102009024 pentatricopeptide repeat-containing protein 1, mitochondrial NW_004955460 15091557 15111456 - 102009024 AGCD01048768;GBDI01065355;XM_005397942;XM_005397943 XP_005397999;XP_005398000 MODEL 8742147 protein-coding Dock9 dedicator of cytokinesis 9 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955404 11542304 11760975 + 102013373 AGCD01003437;AGCD01003438;AGCD01003439;AGCD01003440;AGCD01003441;AGCD01003442;AGCD01003443;AGCD01003444;GBCE01114768;XM_005374066;XM_005374068;XM_005374070;XM_013516091;XM_013516094;XM_013516098;XM_013516099;XM_013516100;XM_013516105;XM_013516109 XP_005374123;XP_005374125;XP_005374127;XP_013371545;XP_013371548;XP_013371552;XP_013371553;XP_013371554;XP_013371559;XP_013371563 MODEL 8837113 pseudo LOC102023630 WD repeat and FYVE domain-containing protein 1 pseudogene NW_004955525 1777379 1778621 + 102023630 AGCD01069059 MODEL 39132202 rrna 5S_rRNA 5S ribosomal RNA 8877928 protein-coding Bnip2 BCL2 interacting protein 2 INVOLVED IN blastocyst development (ortholog); centrosome cycle (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Mesothelioma (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 15157411 15180069 + 102011383 AGCD01042782;AGCD01042783;GBDF01002691;XM_005393826;XM_005393827 XP_005393883;XP_005393884 MODEL 9067512 ncrna LOC102013667 uncharacterized LOC102013667 NW_004955583 509021 511236 - 102013667 AGCD01075831;GBDK01419162;XR_001232499;XR_265094 MODEL 8741546 ncrna LOC102010975 uncharacterized LOC102010975 NW_004955457 7328755 7340258 + 102010975 AGCD01046876;GBDF01145843;XR_262928 MODEL 8884861 ncrna LOC102018207 uncharacterized LOC102018207 NW_004955508 4313935 4333410 - 102018207 AGCD01065865;AGCD01065866;GBDJ01266761;XR_001231653 MODEL 8888677 protein-coding LOC102003619 tubulin alpha chain-like NW_004955406 36709889 36828026 + 102003619 AGCD01006562;AGCD01006563;AGCD01006564;AGCD01006565;AGCD01006566;AGCD01006567;GBCQ01012688;XM_005375474 XP_005375531 MODEL 39132415 snrna U6 U6 spliceosomal RNA 8763603 protein-coding Sgcd sarcoglycan delta INVOLVED IN calcium ion homeostasis (ortholog); calcium-mediated signaling (ortholog); cardiac muscle cell contraction (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2F (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) NW_004955408 10273344 10820108 + 102010673 AGCD01008265;AGCD01008266;AGCD01008267;AGCD01008268;AGCD01008269;AGCD01008270;AGCD01008271;AGCD01008272;AGCD01008273;AGCD01008274;GBCE01162943;XM_005376219;XM_013508746 XP_005376276;XP_013364200 MODEL 8872531 protein-coding CUNH2orf49 chromosome unknown C2orf49 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cardiomyopathy (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); tRNA-splicing ligase complex (ortholog) NW_004955470 10223467 10234309 + 102026964 AGCD01052859;GBDF01118856;XM_005400782 XP_005400839 MODEL 8745813 protein-coding LOC102025345 uncharacterized LOC102025345 NW_004955470 4335967 4370486 + 102025345 AGCD01052729;AGCD01052730;GBCB01120642;XM_005400690;XM_005400691;XM_005400692;XM_005400693 XP_005400747;XP_005400748;XP_005400749;XP_005400750 MODEL 8959626 protein-coding Atf5 activating transcription factor 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cerebellar granule cell precursor proliferation (ortholog); circadian rhythm (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); Huntington's disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955559 1008208 1013023 - 102027351 AGCD01073626;GBDJ01277413;XM_005412814 XP_005412871 MODEL 8868070 protein-coding Bcas2 BCAS2 pre-mRNA processing factor INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); dendrite development (ortholog); dendrite morphogenesis (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH breast cancer (ortholog); diffuse large B-cell lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN DNA replication factor A complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955435 17830532 17857360 - 102018761 AGCD01033373;AGCD01033374;AGCD01033375;GBCB01023597;XM_005389000;XM_013516556 XP_005389057;XP_013372010 MODEL 9031883 protein-coding Fmnl2 formin like 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955440 17925982 18077176 + 102019643 AGCD01036589;AGCD01036590;AGCD01036591;AGCD01036592;AGCD01036593;AGCD01036594;AGCD01036595;GBBH01197804;XM_013517443 XP_013372897 MODEL 8802023 protein-coding Hoxb7 homeobox B7 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic organ development (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophagus squamous cell carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955451 12630276 12634641 + 102006856 AGCD01043417;GBDF01039539;XM_005394241 XP_005394298 MODEL 8931022 protein-coding Nxt1 nuclear transport factor 2 like export factor 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); protein export from nucleus (ortholog); RNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); nuclear pore (ortholog); nuclear RNA export factor complex (ortholog) NW_004955415 30366993 30369688 + 102030302 AGCD01016661;GBDF01008135;XM_005380961;XM_005380963;XM_005380964;XM_013512374 XP_005381018;XP_005381020;XP_005381021;XP_013367828 MODEL 8864590 protein-coding LOC102023255 interleukin-36 beta-like NW_004955470 1290324 1294753 + 102023255 AGCD01052633;XM_005400824 XP_005400881 MODEL 8997684 ncrna LOC102024629 uncharacterized LOC102024629 NW_004955450 2617199 2624097 + 102024629 AGCD01042389;AGCD01042390;AGCD01042391;GBDF01074668;XR_001235839 MODEL 8871607 protein-coding Dennd2b DENN domain containing 2B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Bone Fractures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog); recycling endosome (ortholog) NW_004955414 24470795 24632507 - 102020794 AGCD01015547;AGCD01015548;AGCD01015549;AGCD01015550;GBBH01115663;XM_013511888;XM_013511889;XM_013511890;XM_013511891;XM_013511892;XM_013511893;XM_013511894;XM_013511895;XM_013511896;XM_013511897 XP_013367342;XP_013367343;XP_013367344;XP_013367345;XP_013367346;XP_013367347;XP_013367348;XP_013367349;XP_013367350;XP_013367351 MODEL 8753201 protein-coding Pllp plasmolipin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN monoatomic ion transport (ortholog); myelin assembly (ortholog); myelination (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); schizophrenia (ortholog); FOUND IN apical plasma membrane (ortholog); compact myelin (ortholog); Golgi apparatus (ortholog) NW_004955433 14896087 14915794 - 102025039 AGCD01031731;AGCD01031732;GBBH01093584;XM_005388384 XP_005388441 MODEL 8785655 protein-coding Klc3 kinesin light chain 3 ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); sperm mitochondrial sheath assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN ciliary rootlet (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) NW_004955555 2346241 2355529 + 102010420 AGCD01073148;GBCE01169285;XM_005412517;XM_005412518;XM_005412519;XM_005412520;XM_013508702;XM_013508703;XM_013508704 XP_005412574;XP_005412575;XP_005412576;XP_005412577;XP_013364156;XP_013364157;XP_013364158 MODEL 10103940 protein-coding LOC106150106 uncharacterized LOC106150106 NW_004955465 8504188 8511042 + 106150106 AGCD01050476;GBDJ01211892;XM_013521769;XM_013521770 XP_013377223;XP_013377224 MODEL 9008339 protein-coding Gnai2 G protein subunit alpha i2 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; angiotensin II signaling pathway via AT2 receptor; dopamine signaling pathway via D2 family of receptors; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); Adrenal Cortex Neoplasms (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955532 2059038 2079120 + 102027228 AGCD01070214;GBBH01000266;GBDF01051742;XM_005410250 XP_005410307 MODEL 9044095 pseudo LOC102021551 protein FAM156A/FAM156B-like NW_004955475 2559027 2559617 - 102021551 AGCD01054812 MODEL 39132204 rrna 5S_rRNA 5S ribosomal RNA 8818596 protein-coding Pln phospholamban ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); centronuclear myopathy (ortholog); FOUND IN calcium ion-transporting ATPase complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955436 1439098 1447070 + 102010626 AGCD01033577;GBDK01316951;XM_005389124 XP_005389181 MODEL 8699553 protein-coding LOC102005362 olfactory receptor 51I2 NW_004955414 21355079 21356017 + 102005362 AGCD01015416;XM_005380086 XP_005380143 MODEL 9019987 protein-coding Socs5 suppressor of cytokine signaling 5 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cellular response to low-density lipoprotein particle stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955441 13593342 13657389 + 102014611 AGCD01037155;AGCD01037156;AGCD01037157;GBCB01059474;GBDJ01349288;XM_005390984 XP_005391041 MODEL 9019876 protein-coding LOC102010978 vegetative cell wall protein gp1-like NW_004955410 12702718 12714924 - 102010978 AGCD01010864;GBDJ01264475;XM_005377303;XM_013510591 XP_005377360;XP_013366045 MODEL 9014834 protein-coding Myl10 myosin light chain 10 ASSOCIATED WITH Muscle Hypotonia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955456 15754234 15763987 + 102020207 AGCD01046672;GBCB01042616;XM_005396852 XP_005396909 MODEL 8735375 protein-coding Nasp nuclear autoantigenic sperm protein ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN blastocyst development (ortholog); DNA replication-dependent chromatin assembly (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Female Infertility (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955464 12667050 12697021 - 102027729 AGCD01050214;AGCD01050215;AGCD01050216;GBDI01140112;XM_005398699;XM_005398700;XM_005398701 XP_005398756;XP_005398757;XP_005398758 MODEL 8827123 pseudo LOC102005007 succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial pseudogene NW_004955454 12974527 12986293 + 102005007 AGCD01045425 MODEL 8814544 protein-coding Gpr152 G protein-coupled receptor 152 ENCODES a protein that exhibits identical protein binding (ortholog) NW_004955422 18029704 18034051 + 102018296 AGCD01022935;AGCD01022936;GBDI01248327;XM_005384329;XM_013513937 XP_005384386;XP_013369391 MODEL 9032245 protein-coding LOC102009028 uncharacterized LOC102009028 NW_004955411 2334442 2389596 - 102009028 AGCD01011505;AGCD01011506;XM_013510712 XP_013366166 MODEL 9059681 protein-coding Farsa phenylalanyl-tRNA synthetase subunit alpha ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); protein heterotetramerization (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); phenylalanine-tRNA ligase complex (ortholog) NW_004955415 31972888 31981424 - 102026103 AGCD01016704;GBCE01076932;XM_005381042 XP_005381099 MODEL 8907057 protein-coding Ctnna2 catenin alpha 2 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); brain morphogenesis (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 9 (ortholog); genetic disease (ortholog); high grade glioma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955424 5985170 7055830 - 102012337 AGCD01024414;AGCD01024415;AGCD01024416;AGCD01024417;AGCD01024418;AGCD01024419;AGCD01024420;AGCD01024421;AGCD01024422;AGCD01024423;AGCD01024424;AGCD01024425;AGCD01024426;AGCD01024427;AGCD01024428;AGCD01024429;AGCD01024430;AGCD01024431;AGCD01024432;GBDF01085911;XM_005385453;XM_005385454 XP_005385510;XP_005385511 MODEL 8857212 protein-coding Iscu iron-sulfur cluster assembly enzyme ENCODES a protein that exhibits ferrous iron binding (ortholog); iron-sulfur cluster chaperone activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial [2Fe-2S] assembly complex (ortholog) NW_004955455 9833924 9840547 + 102025085 AGCD01045931;GBCE01000206;XM_005396465 XP_005396522 MODEL 8911878 pseudo LOC102006051 cyclin-G1 pseudogene NW_004955427 21210303 21211288 - 102006051 AGCD01027434 MODEL 8946919 protein-coding LOC102007945 kallikrein-4-like NW_004955558 1622962 1627760 + 102007945 AGCD01073453;GBDF01079521;XM_013508853 XP_013364307 MODEL 8893305 protein-coding Mmp17 matrix metallopeptidase 17 INVOLVED IN drinking behavior (ortholog); kidney development (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog) NW_004955482 788921 797301 - 102023265 AGCD01057188;GBBH01198095;GBDF01306308;XM_013503685 XP_013359139 MODEL 39134411 misc_rna 7SK 7SK RNA 8912222 protein-coding Dbx2 developing brain homeobox 2 INVOLVED IN epidermal growth factor receptor signaling pathway (ortholog); G2/M transition of mitotic cell cycle (ortholog); gene expression (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog) NW_004955500 4212848 4238727 - 102022309 AGCD01063772;GBDF01281507;XM_013505652 XP_013361106 MODEL 8879662 protein-coding Nedd9 neural precursor cell expressed, developmentally down-regulated 9 ENCODES a protein that exhibits protein tyrosine kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cilium disassembly (ortholog); learning or memory (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955465 3101409 3281481 + 102017964 AGCD01050367;AGCD01050368;AGCD01050369;AGCD01050370;GBDI01262004;XM_005398827;XM_013521849 XP_005398884;XP_013377303 MODEL 39134114 misc_rna 7SK 7SK RNA 10359855 protein-coding LOC106147170 endochitinase A-like NW_004955524 3195878 3199487 + 106147170 AGCD01068867;GBDJ01272871;XM_013507262 XP_013362716 MODEL 39132416 snrna U6 U6 spliceosomal RNA 9041331 pseudo LOC102022898 uracil-DNA glycosylase pseudogene NW_004955411 32287945 32288663 - 102022898 AGCD01012299 MODEL 10376196 ncrna LOC106149316 uncharacterized LOC106149316 NW_004955442 10982954 10985899 - 106149316 AGCD01037714;GBDF01089387;XR_001235412 MODEL 9064728 protein-coding CUNH2orf66 chromosome unknown C2orf66 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); urinary bladder cancer (ortholog) NW_004955403 3600567 3604378 + 102017411 AGCD01001770;GBDI01226309;XM_005373272;XM_013512112 XP_005373329;XP_013367566 MODEL 8856953 protein-coding Sgce sarcoglycan epsilon INVOLVED IN kidney development (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH genetic disease (ortholog); myoclonic dystonia (ortholog); myoclonic dystonia 11 (ortholog); FOUND IN dendrite membrane (ortholog); dystrophin-associated glycoprotein complex (ortholog); Golgi apparatus (ortholog) NW_004955432 11310488 11383803 - 102013326 AGCD01030945;AGCD01030946;AGCD01030947;GBDI01385644;XM_005388045;XM_005388047;XM_005388048;XM_005388049;XM_013516087;XM_013516088;XM_013516089 XP_005388102;XP_005388104;XP_005388105;XP_005388106;XP_013371541;XP_013371542;XP_013371543 MODEL 8771046 protein-coding Gnai3 G protein subunit alpha i3 ENCODES a protein that exhibits G protein-coupled serotonin receptor binding (ortholog); GDP binding (ortholog); GTPase activating protein binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cell division (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; endothelin signaling pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amnestic disorder (ortholog); Auriculocondylar Syndrome (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955435 12965006 13005614 + 102005960 AGCD01033176;AGCD01033177;GBDF01188190;XM_005388880 XP_005388937 MODEL 9005202 protein-coding Wfdc8 WAP four-disulfide core domain 8 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955445 11666987 11682180 + 102030679 AGCD01039712;XM_013518242 XP_013373696 MODEL 8988118 protein-coding Hhla1 HHLA1 neighbor of OC90 ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog) NW_004955461 6738022 6774493 - 102003002 AGCD01048911;XM_005398071 XP_005398128 MODEL 8845470 protein-coding Tspan10 tetraspanin 10 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955506 1442378 1448726 - 102003161 AGCD01065263;AGCD01065264;GBCE01121011;XM_005407269;XM_005407270 XP_005407326;XP_005407327 MODEL 9052463 protein-coding LOC102003250 transient receptor potential cation channel subfamily V member 5 NW_004955494 693654 721271 + 102003250 AGCD01061383;GBDF01039033;XM_005405380;XM_013504911 XP_005405437;XP_013360365 MODEL 8704406 protein-coding Hoxb9 homeobox B9 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cell chemotaxis (ortholog); embryonic skeletal system development (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); Breast Neoplasms (ortholog); Ovarian Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955451 12616465 12616926 + 102015274 AGCD01043414;GBDF01267242;GBDJ01193876;XM_013519051 XP_013374505 MODEL 9039046 pseudo LOC102012573 40S ribosomal protein S11-like NW_004955526 2916961 2917447 + 102012573 AGCD01069324 MODEL 10235856 pseudo LOC106150107 gamma-secretase subunit APH-1A pseudogene NW_004955465 10400655 10402220 - 106150107 AGCD01050508 MODEL 8731175 protein-coding Bnip3 BCL2 interacting protein 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN autophagic cell death (ortholog); brown fat cell differentiation (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Chronic Intermittent Hypoxia (ortholog); chronic obstructive pulmonary disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955477 9621812 9630406 - 102022813 AGCD01055677;GBCQ01005103;GBDI01001865;XM_005402035 XP_005402092 MODEL 8770578 ncrna LOC102021557 uncharacterized LOC102021557 NW_004955482 5627591 5629868 - 102021557 AGCD01057343;XR_263833 MODEL 8958421 ncrna LOC102007549 uncharacterized LOC102007549 NW_004955480 6536847 6538193 - 102007549 AGCD01056685;GBDJ01269916;XR_263745 MODEL 8982203 protein-coding LOC102003620 keratin-associated protein 14-like NW_004955407 29792800 29793709 - 102003620 AGCD01007615;XM_005375631 XP_005375688 MODEL 8744412 protein-coding LOC102018211 WD repeat-containing protein 49-like NW_004955431 14732986 14816717 - 102018211 AGCD01030338;AGCD01030339;AGCD01030340;AGCD01030341;GBDF01022038;XM_013515901 XP_013371355 MODEL 8776955 ncrna LOC102006432 uncharacterized LOC102006432 NW_004955410 5331999 5347043 - 102006432 AGCD01010683;GBBH01023353;XR_001232771;XR_259820 MODEL 8793760 protein-coding Atf6 activating transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); enzyme binding (ortholog); INVOLVED IN eye development (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of ATF6-mediated unfolded protein response (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH achromatopsia (ortholog); achromatopsia 7 (ortholog); acute myeloid leukemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fibrillar center (ortholog) NW_004955462 14352956 14553299 - 102005451 AGCD01049445;AGCD01049446;AGCD01049447;AGCD01049448;AGCD01049449;AGCD01049450;GBDJ01424155;XM_005398327 XP_005398384 MODEL 8791777 protein-coding Gapt GRB2 binding adaptor protein, transmembrane INVOLVED IN B cell homeostasis (ortholog); B cell proliferation involved in immune response (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955446 9631970 9639215 - 102009558 AGCD01040161;GBDK01305307;XM_005392673;XM_013518397 XP_005392730;XP_013373851 MODEL 9065771 protein-coding LOC102022900 secreted seminal-vesicle Ly-6 protein 1-like NW_004955412 26692125 26694761 + 102022900 AGCD01013209;GBDF01046724;XM_005378468 XP_005378525 MODEL 10145272 ncrna LOC106149317 uncharacterized LOC106149317 NW_004955442 18223086 18223967 - 106149317 AGCD01038001;GBDF01042119;XR_001235413 MODEL 8743770 pseudo LOC102023261 dnaJ homolog subfamily B member 2-like NW_004955479 9427904 9428831 + 102023261 AGCD01056467 MODEL 8724705 protein-coding Nxt2 nuclear transport factor 2 like export factor 2 ASSOCIATED WITH male infertility (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear RNA export factor complex (ortholog) NW_004955490 6276791 6283768 - 102011209 AGCD01060218;GBDK01117586;XM_005404666;XM_005404667;XM_005404668;XM_005404669 XP_005404723;XP_005404724;XP_005404725;XP_005404726 MODEL 8755597 protein-coding Sgcg sarcoglycan gamma INVOLVED IN gene expression (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2C (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); FOUND IN dystroglycan complex (ortholog); plasma membrane (ortholog); sarcoglycan complex (ortholog) NW_004955497 3592041 3702780 + 102013189 AGCD01062549;AGCD01062550;AGCD01062551;AGCD01062552;GBCB01003278;GBDI01356297;XM_005406371 XP_005406428 MODEL 8861049 protein-coding Dennd2c DENN domain containing 2C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955435 17859521 17960008 - 102019101 AGCD01033375;AGCD01033376;AGCD01033377;AGCD01033378;AGCD01033379;GBCE01080878;XM_005389001;XM_005389002;XM_013516546 XP_005389058;XP_005389059;XP_013372000 MODEL 8717985 protein-coding Dohh deoxyhypusine hydroxylase ENCODES a protein that exhibits deoxyhypusine monooxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN peptidyl-hypusine biosynthetic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); intellectual disability (ortholog); lung cancer (ortholog) NW_004955495 5073794 5080298 + 102020024 AGCD01061973;GBDF01193806;XM_005405836;XM_013505247;XM_013505248 XP_005405893;XP_013360701;XP_013360702 MODEL 8809700 protein-coding Tspan12 tetraspanin 12 ENCODES a protein that exhibits Wnt receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); maintenance of blood-brain barrier (ortholog); Norrin signaling pathway (ortholog); ASSOCIATED WITH Disease Susceptibility (ortholog); exudative vitreoretinopathy (ortholog); exudative vitreoretinopathy 5 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955479 2570937 2636884 - 102005930 AGCD01056276;AGCD01056277;GBCB01074924;GBCE01134144;XM_013503288 XP_013358742 MODEL 10110121 protein-coding Hhla2 HHLA2 member of B7 family INVOLVED IN positive regulation of activated T cell proliferation (ortholog); positive regulation of cytokine production (ortholog); T cell costimulation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog) NW_004955427 8944387 9007648 + 106148693 AGCD01027083;AGCD01027084;AGCD01027085;AGCD01027086;GBCQ01172932;XM_013515059;XM_013515060 XP_013370513;XP_013370514 MODEL 9005672 protein-coding Nat10 N-acetyltransferase 10 ENCODES a protein that exhibits 18S rRNA cytidine N-acetyltransferase activity (ortholog); DNA polymerase binding (ortholog); mRNA cytidine N-acetyltransferase activity (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); positive regulation of translation (ortholog); protein acetylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN midbody (ortholog); nucleolus (ortholog); small-subunit processome (ortholog) NW_004955422 12085970 12122644 - 102018295 AGCD01022776;GBDI01255931;XM_005384148;XM_013514110 XP_005384205;XP_013369564 MODEL 8940671 protein-coding LOC102006056 olfactory receptor 8J3-like NW_004955511 1507684 1508625 + 102006056 AGCD01066370;XM_005407964 XP_005408021 MODEL 9036048 ncrna LOC102007947 uncharacterized LOC102007947 NW_004955443 8832249 8845558 - 102007947 AGCD01038338;GBDJ01378112;XR_001235447;XR_001235448;XR_262198;XR_262199 MODEL 8895042 protein-coding LOC102025347 calcitonin FOUND IN neuronal cell body NW_004955414 30038416 30041811 - 102025347 AGCD01015726;GBDI01013654;XM_005380336;XM_005380337 XP_005380393;XP_005380394 MODEL 39134115 misc_rna 7SK 7SK RNA 8982208 protein-coding Plod1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 ENCODES a protein that exhibits ferrous iron binding (ortholog); L-ascorbic acid binding (ortholog); peptide binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); epidermis development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Arachnodactyly (ortholog); FOUND IN catalytic complex (ortholog) NW_004955486 1967771 1990561 - 102003972 AGCD01058976;AGCD01058977;GBCB01022681;GBDJ01076519;XM_005403978 XP_005404035 MODEL 10238309 protein-coding LOC106147171 translation initiation factor IF-2-like NW_004955524 3232131 3233346 + 106147171 AGCD01068869;GBDI01105569;XM_013507265 XP_013362719 MODEL 8871990 pseudo LOC102003621 chromobox protein homolog 3 pseudogene NW_004955455 2292708 2293259 - 102003621 AGCD01045592;XM_005396565 MODEL 9040908 protein-coding Socs6 suppressor of cytokine signaling 6 INVOLVED IN negative regulation of T cell activation (ortholog); proteasomal protein catabolic process (ortholog); regulation of growth (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN immunological synapse (ortholog) NW_004955402 53847859 53876245 + 102005983 AGCD01001374;AGCD01001375;AGCD01001376;AGCD01001377;GBCB01073847;XM_005373056;XM_005373057 XP_005373113;XP_005373114 MODEL 8923499 protein-coding Ptpn13 protein tyrosine phosphatase non-receptor type 13 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cellular response to toxic substance (ortholog); negative regulation of excitatory synapse assembly (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) NW_004955474 2988109 3140520 - 102019164 AGCD01054318;AGCD01054319;AGCD01054320;AGCD01054321;AGCD01054322;GBDI01182369;XM_005401347;XM_005401348;XM_005401349;XM_005401354;XM_013502736;XM_013502737;XM_013502738;XM_013502739;XM_013502740;XM_013502741;XM_013502742;XM_013502743;XM_013502744 XP_005401404;XP_005401405;XP_005401406;XP_005401411;XP_013358190;XP_013358191;XP_013358192;XP_013358193;XP_013358194;XP_013358195;XP_013358196;XP_013358197;XP_013358198 MODEL 8896745 ncrna LOC102023631 uncharacterized LOC102023631 NW_004955437 3113379 3136035 + 102023631 AGCD01034297;AGCD01034298;GBDF01124453;XR_001235051;XR_001235052;XR_261840 MODEL 8812783 protein-coding Myl11 myosin light chain 11 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN immune response (ortholog); muscle contraction (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH distal arthrogryposis (ortholog); distal arthrogryposis type 1C (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955493 7301609 7304118 + 102012769 AGCD01061177;GBDF01048378;XM_005405251 XP_005405308 MODEL 9005359 pseudo LOC102005009 septin-2-like NW_004955457 11878770 11880262 - 102005009 AGCD01046992 MODEL 9023530 protein-coding LOC102010984 sentrin-specific protease 3 NW_004955467 9351956 9374126 - 102010984 AGCD01051498;GBDJ01134691;XM_005399477;XM_005399478;XM_005399483;XM_013522078;XM_013522079;XM_013522080;XM_013522081;XM_013522082 XP_005399534;XP_005399535;XP_005399540;XP_013377532;XP_013377533;XP_013377534;XP_013377535;XP_013377536 MODEL 39131387 protein-coding WFDC8 WAP four-disulfide core domain 8 8879498 protein-coding LOC102010210 transmembrane protease serine 11A NW_004955447 4915932 4966492 + 102010210 AGCD01040736;GBDI01055640;XM_005392828 XP_005392885 MODEL 8752772 protein-coding Klc4 kinesin light chain 4 ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); high grade glioma (ortholog) NW_004955437 9022873 9036026 + 102003280 AGCD01034513;AGCD01034514;GBBH01140327;XM_005389751;XM_005389752 XP_005389808;XP_005389809 MODEL 9047086 protein-coding Gpr153 G protein-coupled receptor 153 ASSOCIATED WITH cervical cancer (ortholog); Childhood Schizophrenia (ortholog); melanoma (ortholog) NW_004955486 6264321 6270979 + 102025913 AGCD01059116;AGCD01059117;GBBH01225078;GBCE01002905;XM_013504323 XP_013359777 MODEL 8802733 protein-coding Fmnl3 formin like 3 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell migration (ortholog); filopodium assembly (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955547 253149 311157 - 102005513 AGCD01072141;AGCD01072142;AGCD01072143;GBCB01007830;XM_005411841;XM_005411842;XM_005411843;XM_005411844;XM_013508461;XM_013508462 XP_005411898;XP_005411899;XP_005411900;XP_005411901;XP_013363915;XP_013363916 MODEL 8864798 protein-coding LOC102009030 olfactory receptor 8B12-like NW_004955412 25540272 25542114 - 102009030 AGCD01013160;GBDI01315433;XM_005378423 XP_005378480 MODEL 8773751 protein-coding Ctnna3 catenin alpha 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); regulation of heart rate by cardiac conduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular dysplasia 13 (ortholog); asthma (ortholog); FOUND IN adherens junction (ortholog); fascia adherens (ortholog); lamellipodium (ortholog) NW_004955425 18623645 20126200 - 102028655 AGCD01025676;AGCD01025677;AGCD01025678;AGCD01025679;AGCD01025680;AGCD01025681;AGCD01025682;AGCD01025683;AGCD01025684;AGCD01025685;AGCD01025686;AGCD01025687;AGCD01025688;AGCD01025689;AGCD01025690;AGCD01025691;AGCD01025692;AGCD01025693;AGCD01025694;AGCD01025695;AGCD01025696;AGCD01025697;AGCD01025698;AGCD01025699;AGCD01025700;AGCD01025701;AGCD01025702;AGCD01025703;AGCD01025704;AGCD01025705;AGCD01025706;AGCD01025707;AGCD01025708;AGCD01025709;AGCD01025710;AGCD01025711;AGCD01025712;AGCD01025713;AGCD01025714;AGCD01025715;AGCD01025716;GBCB01051182;XM_005385969;XM_005385970;XM_013514887;XM_013514888 XP_005386026;XP_005386027;XP_013370341;XP_013370342 MODEL 39134412 misc_rna 7SK 7SK RNA 39132206 rrna 5S_rRNA 5S ribosomal RNA 8783559 ncrna LOC102012158 uncharacterized LOC102012158 NW_004955407 18483756 18702374 - 102012158 AGCD01007271;AGCD01007272;AGCD01007273;AGCD01007274;AGCD01007275;GBDF01046486;XR_001231621;XR_001231624;XR_001231625;XR_001231626;XR_001231627;XR_001231628;XR_259571 MODEL 8850631 protein-coding Isg15 ISG15 ubiquitin like modifier ENCODES a protein that exhibits integrin binding (ortholog); protein tag activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); defense response to virus (ortholog); innate immune response (ortholog); ASSOCIATED WITH Carcinogenesis (ortholog); Chronic Hepatitis C (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955486 9706878 9707876 - 102006919 AGCD01059196;GBDF01017087;XM_005404270 XP_005404327 MODEL 8728420 protein-coding Dcaf1 DDB1 and CUL4 associated factor 1 ENCODES a protein that exhibits histone H2AT120 kinase activity (ortholog); nuclear estrogen receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cell competition in a multicellular organism (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); COP9 signalosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955532 3085386 3153952 - 102016515 AGCD01070267;AGCD01070268;AGCD01070269;GBCB01076935;XM_005410312;XM_005410314;XM_013507626;XM_013507627 XP_005410369;XP_005410371;XP_013363080;XP_013363081 MODEL 8729820 ncrna LOC102021559 uncharacterized LOC102021559 NW_004955484 6885587 6902049 + 102021559 AGCD01058297;GBDF01041123;XR_263891;XR_263892 MODEL 10367368 protein-coding LOC106150108 collagen alpha-1(VIII) chain-like NW_004955465 3546577 3559365 - 106150108 AGCD01050381;AGCD01050382;GBDF01292680;XM_013521773 XP_013377227 MODEL 8992073 ncrna LOC102024632 uncharacterized LOC102024632 NW_004955403 7768326 7771700 + 102024632 AGCD01001863;GBDF01305594;XR_259161 MODEL 8817192 pseudo LOC102006437 splicing factor 45-like NW_004955411 31564696 31581136 + 102006437 AGCD01012274;AGCD01012275 MODEL 8899519 pseudo LOC102023690 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955416 646836 651260 - 102023690 AGCD01016816;AGCD01016817;XR_260344 MODEL 8730602 protein-coding LOC102003251 olfactory receptor 4C3-like NW_004955422 242830 243737 - 102003251 AGCD01022401;XM_013513877 XP_013369331 MODEL 8750271 protein-coding LOC102007948 leukocyte immunoglobulin-like receptor subfamily B member 3 NW_004955567 1160961 1183994 + 102007948 AGCD01074460;AGCD01074461;GBCE01168958;XM_005413368;XM_013509271;XM_013509272;XM_013509273;XM_013509274;XM_013509275;XM_013509276;XM_013509277;XM_013509278 XP_005413425;XP_013364725;XP_013364726;XP_013364727;XP_013364728;XP_013364729;XP_013364730;XP_013364731;XP_013364732 MODEL 8810951 protein-coding Hoxc10 homeobox C10 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH Kyphoscoliosis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955458 1243529 1248653 + 102027150 AGCD01047172;GBCQ01151679;XM_005397198 XP_005397255 MODEL 9041374 protein-coding Farsb phenylalanyl-tRNA synthetase subunit beta ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); protein heterotetramerization (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); phenylalanine-tRNA ligase complex (ortholog) NW_004955453 11176481 11237243 + 102023772 AGCD01044804;AGCD01044805;AGCD01044806;GBDF01053840;XM_005395494 XP_005395551 MODEL 8792457 ncrna LOC102012575 uncharacterized LOC102012575 NW_004955437 2310695 2312191 + 102012575 AGCD01034263;XR_261833 MODEL 9020974 protein-coding Mmp19 matrix metallopeptidase 19 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN luteolysis (ortholog); ovarian follicle development (ortholog); ovulation from ovarian follicle (ortholog); ASSOCIATED WITH Cavitary Optic Disc Anomalies (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog) NW_004955458 3473279 3479620 - 102023231 AGCD01047303;AGCD01047304;GBDK01015850;XM_005397266 XP_005397323 MODEL 9032189 protein-coding LOC102005363 olfactory receptor 10A4 NW_004955414 22800006 22800953 + 102005363 AGCD01015478;XM_005380181 XP_005380238 MODEL 8891162 protein-coding Dok1 docking protein 1 INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); intracellular signal transduction (ortholog); macrophage colony-stimulating factor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955424 11233601 11236397 - 102024254 AGCD01024559;GBCE01096800;XM_005385493;XM_013514651 XP_005385550;XP_013370105 MODEL 8899959 protein-coding Bcas3 BCAS3 microtubule associated cell migration factor ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); cellular response to estrogen stimulus (ortholog); positive regulation of catalytic activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN cell leading edge (ortholog); cell periphery (ortholog); cytoplasm (ortholog) NW_004955451 1929857 2450225 + 102009134 AGCD01042999;AGCD01043000;AGCD01043001;AGCD01043002;AGCD01043003;AGCD01043004;AGCD01043005;AGCD01043006;AGCD01043007;AGCD01043008;AGCD01043009;GBBH01077707;GBDJ01275049;XM_013519304 XP_013374758 MODEL 8832214 protein-coding Hibadh 3-hydroxyisobutyrate dehydrogenase ENCODES a protein that exhibits 3-hydroxyisobutyrate dehydrogenase activity (ortholog); INVOLVED IN L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955410 29180411 29294273 - 102009025 AGCD01011276;AGCD01011277;AGCD01011278;AGCD01011279;AGCD01011280;AGCD01011281;GBCE01153175;XM_005377465 XP_005377522 MODEL 8951010 protein-coding Fmo1 flavin containing dimethylaniline monoxygenase 1 ENCODES a protein that exhibits hypotaurine monooxygenase activity (ortholog); monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); glutathione metabolic process (ortholog); negative regulation of fatty acid oxidation (ortholog); PARTICIPATES IN tamoxifen pharmacodynamics pathway; tamoxifen pharmacokinetics pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autism spectrum disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955406 11882656 11915875 + 102022158 AGCD01005897;AGCD01005898;GBDF01063029;XM_005374832;XM_005374833 XP_005374889;XP_005374890 MODEL 8921678 pseudo LOC102007550 thioredoxin pseudogene NW_004955417 25525969 25526425 + 102007550 AGCD01018486 MODEL 9043445 protein-coding CUNH2orf68 chromosome unknown C2orf68 homolog NW_004955424 1895757 1897797 + 102026763 AGCD01024249;GBDF01155585;XM_005385419 XP_005385476 MODEL 9037863 ncrna LOC102022901 uncharacterized LOC102022901 NW_004955467 4366751 4390108 - 102022901 AGCD01051364;AGCD01051365;GBDF01026954;XR_001236834;XR_263333 MODEL 9028316 protein-coding Gnal G protein subunit alpha L ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Dysarthria (ortholog); dystonia (ortholog); FOUND IN acrosomal vesicle (ortholog); apical cytoplasm (ortholog); ciliary necklace (ortholog) NW_004955402 1182515 1249301 - 102016537 AGCD01000051;AGCD01000052;GBBH01086243;XM_005372576;XM_005372577;XM_005372578;XM_013514258;XM_013514351 XP_005372633;XP_005372634;XP_005372635;XP_013369712;XP_013369805 MODEL 10251160 ncrna LOC106149318 uncharacterized LOC106149318 NW_004955442 7314346 7319407 + 106149318 AGCD01037623;XR_001235415 MODEL 8932545 pseudo LOC102023635 actin, cytoplasmic 1-like NW_004955543 956118 957366 + 102023635 AGCD01071608 MODEL 8718067 protein-coding Nyap1 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 INVOLVED IN neuron projection morphogenesis (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955573 402180 410729 - 102022551 AGCD01074976;GBDJ01403614;XM_005413725;XM_005413726;XM_013509491;XM_013509492 XP_005413782;XP_005413783;XP_013364945;XP_013364946 MODEL 8742476 protein-coding Tspan13 tetraspanin 13 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN regulation of calcium ion transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 19971216 19979923 + 102021637 AGCD01011039;GBBH01095569;XM_013510494 XP_013365948 MODEL 39132417 snrna U6 U6 spliceosomal RNA 8785512 protein-coding Bnip3l BCL2 interacting protein 3 like ENCODES a protein that exhibits identical protein binding (ortholog); lamin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); defense response to virus (ortholog); mitochondrial protein catabolic process (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Cerebral Hemorrhage (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955403 49122408 49144162 + 102027479 AGCD01002935;GBDF01047886;XM_005373726 XP_005373783 MODEL 8902180 protein-coding Ctnnal1 catenin alpha like 1 INVOLVED IN Rho protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955419 17975242 18028100 + 102004283 AGCD01020168;GBBH01209679;XM_005382935 XP_005382992 MODEL 39132207 rrna 5S_rRNA 5S ribosomal RNA 8708315 protein-coding LOC102006058 olfactory receptor 5D16-like NW_004955511 662118 663074 + 102006058 AGCD01066337;XM_005408204 XP_005408261 MODEL 8757427 ncrna LOC102012577 uncharacterized LOC102012577 NW_004955437 7996387 8008061 - 102012577 AGCD01034476;GBDF01158367;XR_261866 MODEL 8969352 protein-coding Atf6b activating transcription factor 6 beta ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of ATF6-mediated unfolded protein response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955437 582083 592026 - 102008979 AGCD01034149;AGCD01034150;GBCQ01065006;XM_005389410;XM_013516900 XP_005389467;XP_013372354 MODEL 8976513 ncrna LOC102025348 uncharacterized LOC102025348 NW_004955471 8707226 8728861 + 102025348 AGCD01053191;AGCD01053192;GBDK01310632;XR_001237062 MODEL 10076475 ncrna LOC106147172 uncharacterized LOC106147172 NW_004955524 3298016 3298956 - 106147172 AGCD01068879;GBDF01224074;XR_001231951 MODEL 8722393 ncrna LOC102003630 uncharacterized LOC102003630 NW_004955461 9207794 9213408 + 102003630 AGCD01048943;GBDF01222087;XR_001236550;XR_001236551;XR_001236552 MODEL 8939782 protein-coding LOC102024634 keratin-associated protein 10-11-like NW_004955728 8357 9502 - 102024634 AGCD01078208;XM_005415079 XP_005415136 MODEL 8944678 protein-coding Gapvd1 GTPase activating protein and VPS9 domains 1 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955419 2947128 3046230 - 102014567 AGCD01019690;AGCD01019691;AGCD01019692;AGCD01019693;AGCD01019694;AGCD01019695;AGCD01019696;AGCD01019697;AGCD01019698;AGCD01019699;AGCD01019700;GBCQ01001063;XM_005382462;XM_005382463;XM_005382465;XM_013513176;XM_013513177;XM_013513178 XP_005382519;XP_005382520;XP_005382522;XP_013368630;XP_013368631;XP_013368632 MODEL 8845135 protein-coding Plod2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 ENCODES a protein that exhibits procollagen glucosyltransferase activity (ortholog); procollagen-lysine 5-dioxygenase activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH Bone Neoplasms (ortholog); Breast Cancer, Familial (ortholog); Bruck syndrome (ortholog); FOUND IN cytoplasm (ortholog); rough endoplasmic reticulum membrane (ortholog) NW_004955474 11392163 11473918 + 102020659 AGCD01054622;AGCD01054623;AGCD01054624;GBDF01305945;GBDJ01137009;XM_005401440;XM_005401441 XP_005401497;XP_005401498 MODEL 8730005 protein-coding Myl2 myosin light chain 2 ENCODES a protein that exhibits actin monomer binding (ortholog); calcium ion binding (ortholog); structural constituent of muscle (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cardiac myofibril assembly (ortholog); cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); congenital heart disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cardiac myofibril (ortholog); contractile muscle fiber (ortholog) NW_004955482 7708436 7713877 - 102027980 AGCD01057488;GBDF01277424;XM_005403168 XP_005403225 MODEL 9039470 protein-coding LOC102006440 olfactory receptor 8D2-like NW_004955412 25129549 25130483 - 102006440 AGCD01013136;XM_013510980 XP_013366434 MODEL 8837526 protein-coding Sgcz sarcoglycan zeta ASSOCIATED WITH amphetamine abuse (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog); sarcoglycan complex (ortholog) NW_004955463 2114115 3127633 + 102013394 AGCD01049539;AGCD01049540;AGCD01049541;AGCD01049542;AGCD01049543;AGCD01049544;AGCD01049545;AGCD01049546;AGCD01049547;AGCD01049548;AGCD01049549;AGCD01049550;AGCD01049551;AGCD01049552;AGCD01049553;AGCD01049554;AGCD01049555;AGCD01049556;AGCD01049557;AGCD01049558;AGCD01049559;AGCD01049560;AGCD01049561;AGCD01049562;AGCD01049563;AGCD01049564;AGCD01049565;AGCD01049566;AGCD01049567;AGCD01049568;AGCD01049569;AGCD01049570;AGCD01049571;AGCD01049572;AGCD01049573;AGCD01049574;AGCD01049575;AGCD01049576;AGCD01049577;GBDF01041307;XM_005398345 XP_005398402 MODEL 9050824 ncrna LOC102003254 uncharacterized LOC102003254 NW_004955423 19319841 19322762 - 102003254 AGCD01023889;GBDF01056704;XR_260982 MODEL 8789723 protein-coding LOC102005010 vomeronasal type-2 receptor 116-like NW_004955457 13422847 13441378 - 102005010 AGCD01047044;XM_005397122 XP_005397179 MODEL 8792146 protein-coding Nat14 N-acetyltransferase 14 (putative) ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955567 809832 812313 - 102021288 AGCD01074433;GBDI01125613;XM_013509301 XP_013364755 MODEL 39131448 protein-coding WFDC9 WAP four-disulfide core domain 9 8804924 protein-coding LOC102010212 olfactory receptor 2B6-like NW_004955576 1169060 1171950 - 102010212 AGCD01075362;XM_005413949 XP_005414006 MODEL 9001004 ncrna LOC102018213 uncharacterized LOC102018213 NW_004955433 14380516 14385234 + 102018213 AGCD01031721;GBDF01051190;XR_261596 MODEL 8840562 protein-coding Gpr155 G protein-coupled receptor 155 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to cholesterol (ortholog); cognition (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955449 889657 930146 + 102005862 AGCD01041775;AGCD01041776;GBDI01125208;XM_005393184;XM_005393185;XM_005393186;XM_005393188 XP_005393241;XP_005393242;XP_005393243;XP_005393245 MODEL 8729600 ncrna LOC102013669 uncharacterized LOC102013669 NW_004955402 23332562 23349864 - 102013669 AGCD01000621;AGCD01000622;XR_259064 MODEL 8791764 ncrna LOC102009031 uncharacterized LOC102009031 NW_004955413 3100551 3144356 - 102009031 AGCD01013567;AGCD01013568;GBBH01229827;XR_001233023;XR_001233024;XR_001233025;XR_001233026;XR_001233027 MODEL 8758750 protein-coding LOC102005364 sulfotransferase 1C3 NW_004955470 11921964 11938687 + 102005364 AGCD01052911;AGCD01052912;AGCD01052913;AGCD01052914;GBCQ01008545;GBCQ01008546;XM_013522838 XP_013378292 MODEL 8914868 protein-coding LOC102012159 keratin-associated protein 11-1 NW_004955407 30616573 30617451 - 102012159 AGCD01007639;XM_005375656 XP_005375713 MODEL 10227367 protein-coding LOC106150109 vegetative cell wall protein gp1-like NW_004955465 3912130 3915205 - 106150109 AGCD01050399;XM_013521774 XP_013377228 MODEL 8931909 protein-coding Isg20 interferon stimulated exonuclease gene 20 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); exonuclease activity (ortholog); single-stranded DNA 3'-5' DNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA catabolic process (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955416 16305534 16321596 - 102007008 AGCD01017352;GBDK01383095;XM_005381569;XM_005381570 XP_005381626;XP_005381627 MODEL 8841914 protein-coding Dcaf10 DDB1 and CUL4 associated factor 10 ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955419 28617171 28671475 - 102029970 AGCD01020470;AGCD01020471;AGCD01020472;AGCD01020473;GBBH01155192;GBCB01089630;XM_005382862 XP_005382919 MODEL 8990689 protein-coding Nefh neurofilament heavy chain ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN axon development (ortholog); axon regeneration (ortholog); axonal transport of mitochondrion (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Anti-N-Methyl-D-Aspartate Receptor Encephalitis (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); basal proximal dendrite (ortholog) NW_004955455 3735330 3744714 + 102007407 AGCD01045648;AGCD01045649;AGCD01045650;GBDK01418511;XM_013520291;XM_013520292;XM_013520293;XM_013520294;XM_013520295 XP_013375745;XP_013375746;XP_013375747;XP_013375748;XP_013375749 MODEL 8748193 pseudo LOC102007552 60S ribosomal protein L17 pseudogene NW_004955419 5413575 5414083 - 102007552 AGCD01019806 MODEL 8884781 protein-coding Socs7 suppressor of cytokine signaling 7 ENCODES a protein that exhibits phosphorylation-dependent protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cerebral cortex radially oriented cell migration (ortholog); fat cell differentiation (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH lung squamous cell carcinoma (ortholog); ovarian carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955451 13567377 13595685 + 102017528 AGCD01043490;GBBH01037090;GBDF01007859;XM_013519430 XP_013374884 MODEL 8956859 ncrna LOC102023695 uncharacterized LOC102023695 NW_004955416 24064757 24111176 - 102023695 AGCD01017560;GBCE01142447;XR_001233308;XR_001233309;XR_001233310;XR_001233311;XR_001233312;XR_001233313;XR_260416 MODEL 8833789 protein-coding Ptpn14 protein tyrosine phosphatase non-receptor type 14 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN lymphangiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of protein export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 3368833 3463170 + 102012155 AGCD01005671;AGCD01005672;GBCE01077552;XM_005374719;XM_013519964 XP_005374776;XP_013375418 MODEL 8739789 protein-coding Dennd2d DENN domain containing 2D ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955435 14744226 14764034 - 102025162 AGCD01033249;GBBH01165854;XM_005388943;XM_013516455;XM_013516456;XM_013516457;XM_013516458 XP_005389000;XP_013371909;XP_013371910;XP_013371911;XP_013371912 MODEL 8921300 pseudo LOC102007950 tubulin-specific chaperone A-like NW_004955446 19105862 19111198 + 102007950 AGCD01040423 MODEL 8904212 protein-coding LOC102022902 histone H2B type 2-F NW_004955413 905879 907831 + 102022902 AGCD01013494;GBDF01049953;XM_005378711 XP_005378768 MODEL 9051180 protein-coding LOC102010985 C-type lectin domain family 2 member F-like NW_004955413 7883706 7902234 + 102010985 AGCD01013835;GBDK01420751;XM_013511366;XM_013511367 XP_013366820;XP_013366821 MODEL 8903191 protein-coding LOC102023639 olfactory receptor 11H6-like NW_004955550 690292 691122 + 102023639 AGCD01072515;XM_013508547 XP_013364001 MODEL 8739241 protein-coding Hoxc11 homeobox C11 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic digit morphogenesis (ortholog); embryonic skeletal joint morphogenesis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 1231625 1234785 + 102026835 AGCD01047172;GBCB01111909;XM_005397197 XP_005397254 MODEL 39134413 misc_rna 7SK 7SK RNA 9049972 protein-coding Myl3 myosin light chain 3 ENCODES a protein that exhibits actin monomer binding (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); regulation of striated muscle contraction (ortholog); regulation of the force of heart contraction (ortholog); PARTICIPATES IN prostaglandin I2 signaling pathway; ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy 1U (ortholog); familial hypertrophic cardiomyopathy (ortholog); FOUND IN A band (ortholog); I band (ortholog); myosin complex (ortholog) NW_004955420 25308513 25311959 + 102020451 AGCD01021349;GBDF01147915;XM_005383424 XP_005383481 MODEL 8888264 protein-coding Fas Fas cell surface death receptor ENCODES a protein that exhibits calmodulin binding (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN apical dendrite (ortholog); apical plasma membrane (ortholog); CD95 death-inducing signaling complex (ortholog) NW_004955425 3961671 3987513 - 102018947 AGCD01025304;AGCD01025305;GBDK01273863;XM_005385857;XM_005385858 XP_005385914;XP_005385915 MODEL 8900748 protein-coding Gnao1 G protein subunit alpha o1 ENCODES a protein that exhibits corticotropin-releasing hormone receptor 1 binding (ortholog); G protein activity (ortholog); G protein-coupled serotonin receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); PARTICIPATES IN dopamine signaling pathway via D2 family of receptors; endothelin signaling pathway; G protein mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cell body (ortholog); cytoplasmic side of plasma membrane (ortholog); dendrite (ortholog) NW_004955433 14004813 14170631 + 102012352 AGCD01031705;AGCD01031706;AGCD01031707;GBCE01081150;XM_005388343;XM_005388344;XM_005388348 XP_005388400;XP_005388401;XP_005388405 MODEL 8986534 protein-coding LOC102021560 olfactory receptor 1N2-like NW_004955419 5190554 5191489 - 102021560 AGCD01019788;XM_013513101 XP_013368555 MODEL 8886905 protein-coding Dok2 docking protein 2 ENCODES a protein that exhibits transmembrane receptor protein tyrosine kinase adaptor activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); Ras protein signal transduction (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Crohn's disease (ortholog); lung adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 45410689 45421366 - 102028367 AGCD01002814;GBDK01073806;XM_005373638;XM_005373639;XM_013513661 XP_005373695;XP_005373696;XP_013369115 MODEL 8750247 protein-coding Ctnnb1 catenin beta 1 ENCODES a protein that exhibits alpha-catenin binding (ortholog); cadherin binding (ortholog); chromatin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); adherens junction organization (ortholog); angiogenesis (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; E-cadherin signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); adamantinous craniopharyngioma (ortholog); adenocarcinoma (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apical junction complex (ortholog) NW_004955420 29030716 29047447 - 102007777 AGCD01021492;GBCB01005191;GBCE01051940;XM_005383567 XP_005383624 MODEL 8735963 protein-coding Gnaq G protein subunit alpha q ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); G protein activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN action potential (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to acidic pH (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; angiotensin II signaling pathway via AT1 receptor; eicosanoid signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); anisometropia (ortholog); arteriovenous malformation (ortholog); FOUND IN caveola (ortholog); cell body (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955512 1381159 1658409 + 102026456 AGCD01066643;AGCD01066644;AGCD01066645;AGCD01066646;AGCD01066647;AGCD01066648;AGCD01066649;GBBH01011445;XM_005408301;XM_005408302 XP_005408358;XP_005408359 MODEL 9005781 protein-coding CUNH2orf69 chromosome unknown C2orf69 homolog INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); combined oxidative phosphorylation deficiency 53 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955403 1349489 1352541 - 102022772 AGCD01001717;GBCB01073853;XM_013511947 XP_013367401 MODEL 8715783 protein-coding LOC102024636 keratin-associated protein 4-3-like NW_004955451 15571355 15602825 - 102024636 AGCD01043618;AGCD01043619;AGCD01043620;AGCD01043621;XM_013519179 XP_013374633 MODEL 8813947 protein-coding Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955442 16573094 16577650 - 102024168 AGCD01037901;GBDK01343854;XM_005391633 XP_005391690 MODEL 8849891 protein-coding Nyap2 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 INVOLVED IN neuron projection morphogenesis (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH lung cancer (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955453 8585848 8859417 - 102010971 AGCD01044766;AGCD01044767;GBDF01236160;XM_013519763 XP_013375217 MODEL 8810371 pseudo LOC102006441 rRNA-processing protein UTP23 homolog pseudogene NW_004955412 35586005 35587704 - 102006441 AGCD01013412 MODEL 8887677 ncrna LOC102005017 uncharacterized LOC102005017 NW_004955466 5718966 5721167 + 102005017 AGCD01050888;GBDF01281132;XR_001236796 MODEL 8727981 protein-coding Tspan14 tetraspanin 14 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); tetraspanin-enriched microdomain (ortholog) NW_004955510 463548 490635 + 102028319 AGCD01066149;AGCD01066150;GBDJ01088086;XM_005407874 XP_005407931 MODEL 8830903 protein-coding LOC102023264 translation initiation factor IF-2-like NW_004955418 18628035 18757375 + 102023264 AGCD01019177;AGCD01019178;AGCD01019179;AGCD01019180;AGCD01019181;AGCD01019182;GBBH01069334;XM_013512952;XR_001233506;XR_001233507;XR_001233508;XR_260566;XR_260568 XP_013368406 MODEL 9023279 protein-coding Hibch 3-hydroxyisobutyryl-CoA hydrolase ENCODES a protein that exhibits 3-hydroxyisobutyryl-CoA hydrolase activity (ortholog); INVOLVED IN L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-hydroxyisobutryl-CoA hydrolase deficiency (ortholog); acute myeloid leukemia (ortholog); Ataxia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955403 8752339 8796693 + 102003397 AGCD01001889;GBDF01222031;XM_005373307 XP_005373364 MODEL 8713044 protein-coding Bcas4 breast carcinoma amplified sequence 4 ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955445 7542545 7603896 - 102026052 AGCD01039544;AGCD01039545;AGCD01039546;GBCE01013075;GBDI01222160;XM_013518344;XM_013518345;XM_013518346 XP_013373798;XP_013373799;XP_013373800 MODEL 8780668 ncrna LOC102006062 uncharacterized LOC102006062 NW_004955432 9620240 9642499 + 102006062 AGCD01030909;XR_261520 MODEL 8861575 pseudo LOC102012580 SPRY domain-containing protein 4 pseudogene NW_004955538 3531985 3536331 - 102012580 AGCD01071169 MODEL 8740660 protein-coding Gpr156 G protein-coupled receptor 156 INVOLVED IN stereocilium bundle organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 121 (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955427 19742505 19796288 - 102023502 AGCD01027376;AGCD01027377;AGCD01027378;AGCD01027379;GBDF01187294;XM_005386463 XP_005386520 MODEL 8732000 pseudo LOC102003632 60S ribosomal protein L35a pseudogene NW_004955462 10954407 10954736 - 102003632 AGCD01049379;XM_005398243 MODEL 8846730 pseudo LOC102025350 mas-related G-protein coupled receptor member X1-like NW_004955414 33638100 33644821 - 102025350 AGCD01015816;AGCD01015817 MODEL 8702681 protein-coding Atf7 activating transcription factor 7 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN heart development (ortholog); hematopoietic progenitor cell differentiation (ortholog); hepatocyte apoptotic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955458 803738 898847 - 102023878 AGCD01047154;AGCD01047155;AGCD01047156;GBCB01056445;XM_005397189;XM_005397190 XP_005397246;XP_005397247 MODEL 10364025 protein-coding LOC106147173 arrestin domain-containing protein 2-like NW_004955524 3321325 3322120 - 106147173 AGCD01068881;GBCE01142122;GBDI01227027;XM_013507271 XP_013362725 MODEL 8971238 protein-coding Klf1 KLF transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to endothelin (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); chromosome 5q deletion syndrome (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 31939994 31943539 - 102024559 AGCD01016703;GBDI01044226;XM_005381037;XM_013512240 XP_005381094;XP_013367694 MODEL 9028095 ncrna LOC102003258 uncharacterized LOC102003258 NW_004955424 19212442 19216315 - 102003258 AGCD01024810;GBDF01079876;XR_261081 MODEL 8870289 ncrna LOC102007553 uncharacterized LOC102007553 NW_004955483 2038491 2047890 - 102007553 AGCD01057666;GBCQ01014966;XR_263863 MODEL 8898603 protein-coding Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ENCODES a protein that exhibits iron ion binding (ortholog); metal ion binding (ortholog); procollagen galactosyltransferase activity (ortholog); INVOLVED IN basement membrane assembly (ortholog); cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); ASSOCIATED WITH BCARD syndrome (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955456 16082424 16090773 + 102023777 AGCD01046689;GBDF01156007;XM_005396861;XM_005396862 XP_005396918;XP_005396919 MODEL 9027939 protein-coding LOC102023640 beta-microseminoprotein-like NW_004955556 255059 262466 + 102023640 AGCD01073169;GBDF01116602;XM_005412549 XP_005412606 MODEL 8853797 protein-coding Sgf29 SAGA complex associated factor 29 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); methylation-dependent protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN ATAC complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955493 6759426 6774796 + 102018505 AGCD01061137;GBCB01041570;XM_005405175;XM_005405176;XM_005405177 XP_005405232;XP_005405233;XP_005405234 MODEL 39132420 snrna U6 U6 spliceosomal RNA 8733179 protein-coding LOC102022905 T-cell surface glycoprotein CD1c3-like NW_004955468 10061076 10101044 + 102022905 AGCD01052066;AGCD01052067;GBDK01254259;XM_005400142;XM_013522487 XP_005400199;XP_013377941 MODEL 8739963 protein-coding LOC102007951 cytochrome P450 3A9-like NW_004955573 1323275 1354705 - 102007951 AGCD01075041;AGCD01075042;AGCD01075043;AGCD01075044;XM_013509451 XP_013364905 MODEL 8910930 protein-coding Nat16 N-acetyltransferase 16 (putative) NW_004955456 16114681 16118249 + 102025213 AGCD01046690;XM_013520520 XP_013375974 MODEL 8852628 ncrna LOC102010215 uncharacterized LOC102010215 NW_004955449 8016115 8072779 - 102010215 AGCD01042007;AGCD01042008;XR_262494 MODEL 39132208 rrna 5S_rRNA 5S ribosomal RNA 8966730 ncrna LOC102013670 uncharacterized LOC102013670 NW_004955588 40134 44201 - 102013670 AGCD01076078;AGCD01076079;GBDF01235165;XR_265116 MODEL 8960283 protein-coding Nynrin NYN domain and retroviral integrase containing ASSOCIATED WITH hepatoblastoma (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955409 35890158 35910859 - 102027050 AGCD01010435;GBBH01187812;GBDJ01278376;XM_005377001 XP_005377058 MODEL 8845504 pseudo LOC102005366 acyl-protein thioesterase 1 pseudogene NW_004955414 31575081 31575919 + 102005366 AGCD01015757 MODEL 8748199 protein-coding LOC102009035 uncharacterized LOC102009035 NW_004955413 33713020 33714649 + 102009035 AGCD01014688;GBDI01173861;XM_013511547;XM_013511548 XP_013367001;XP_013367002 MODEL 10346809 protein-coding LOC106150110 uncharacterized LOC106150110 NW_004955465 10014897 10017658 - 106150110 AGCD01050498;AGCD01050499;XM_013521776 XP_013377230 MODEL 9036098 ncrna LOC102012163 uncharacterized LOC102012163 NW_004955409 610554 611768 - 102012163 AGCD01009158;GBDF01126147;XR_259741 MODEL 8757349 protein-coding Isg20l2 interferon stimulated exonuclease gene 20 like 2 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); thymoma (ortholog) NW_004955545 2797370 2804142 - 102008263 AGCD01071923;GBDF01006917;XM_005411698 XP_005411755 MODEL 9012459 protein-coding Bnip5 BCL2 interacting protein 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); prostate cancer (ortholog) NW_004955437 4049113 4067150 - 102009216 AGCD01034359;GBCQ01139589;XM_005389589;XM_005389590;XM_005389591 XP_005389646;XP_005389647;XP_005389648 MODEL 8805393 protein-coding Gar1 GAR1 ribonucleoprotein ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); RNA binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN snoRNA guided rRNA pseudouridine synthesis (ortholog); telomere maintenance via telomerase (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); dyskeratosis congenita (ortholog); hematopoietic system disease (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); chromosome, telomeric region (ortholog) NW_004955496 476061 483030 - 102024699 AGCD01062228;GBCQ01179090;XM_005406186 XP_005406243 MODEL 8776326 protein-coding Dcaf11 DDB1 and CUL4 associated factor 11 INVOLVED IN cognition (ortholog); exploration behavior (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) NW_004955409 36272184 36279985 - 102012168 AGCD01010454;GBBH01034603;XM_005377047;XM_005377048;XM_005377049;XM_013510410 XP_005377104;XP_005377105;XP_005377106;XP_013365864 MODEL 8870848 protein-coding Gnat1 G protein subunit alpha transducin 1 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN background adaptation (ortholog); cell population proliferation (ortholog); cellular response to electrical stimulus (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1C (ortholog); congenital stationary night blindness 1G (ortholog); FOUND IN apical plasma membrane (ortholog); heterotrimeric G-protein complex (ortholog); neuronal cell body (ortholog) NW_004955532 2018850 2023603 + 102026151 AGCD01070209;GBBH01099473;XM_005410247 XP_005410304 MODEL 9031359 protein-coding Dennd3 DENN domain containing 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955454 185299 253935 + 102020306 AGCD01044945;AGCD01044946;AGCD01044947;AGCD01044948;AGCD01044949;GBDJ01317334;GBDK01081145;XM_013520212 XP_013375666 MODEL 8767494 protein-coding CUNH2orf74 chromosome unknown C2orf74 homolog ASSOCIATED WITH visceral heterotaxy (ortholog) NW_004955424 22709676 22712178 - 102024590 AGCD01024981;GBDF01045251;XM_013514609;XM_013514610;XR_001234161 XP_013370063;XP_013370064 MODEL 8726727 protein-coding Ptpn18 protein tyrosine phosphatase non-receptor type 18 ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955459 65191 90459 + 102012407 AGCD01047924;GBDK01194260;XM_005397542;XM_005397543;XM_005397544 XP_005397599;XP_005397600;XP_005397601 MODEL 9064063 protein-coding Nefl neurofilament light chain ENCODES a protein that exhibits identical protein binding (ortholog); molecular condensate scaffold activity (ortholog); phospholipase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); axonal transport of mitochondrion (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH acute disseminated encephalomyelitis (ortholog); AIDS Dementia Complex (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); cholinergic synapse (ortholog); cytoplasm (ortholog) NW_004955403 47946413 47951734 - 102021934 AGCD01002904;GBDI01079979;XM_005373709;XM_005373710 XP_005373766;XP_005373767 MODEL 8804102 protein-coding Mmp2 matrix metallopeptidase 2 ENCODES a protein that exhibits endopeptidase activity (ortholog); fibronectin binding (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel maturation (ortholog); bone trabecula formation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955433 13024844 13050041 + 102005293 AGCD01031673;AGCD01031674;GBBH01030577;GBDJ01018930;XM_005388317 XP_005388374 MODEL 8808126 pseudo LOC102010986 tubulin polyglutamylase complex subunit 2 pseudogene NW_004955468 4276509 4282049 + 102010986 AGCD01051904 MODEL 39134414 misc_rna 7SK 7SK RNA 8840211 pseudo LOC102018214 retinal dehydrogenase 1-like NW_004955434 130312 183170 - 102018214 AGCD01031996;AGCD01031997;AGCD01031998;AGCD01031999;AGCD01032000 MODEL 39131389 protein-coding CTNNBIP1 catenin beta interacting protein 1 8784625 protein-coding LOC102023266 E3 ubiquitin-protein ligase TRIM38-like NW_004955483 1099077 1110250 + 102023266 AGCD01057640;AGCD01057641;AGCD01057642;AGCD01057643;GBCE01118982;GBCE01119007;XM_005403317 XP_005403374 MODEL 9028273 protein-coding Sod1 superoxide dismutase 1 ENCODES a protein that exhibits copper ion binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN action potential initiation (ortholog); anterograde axonal transport (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN amyotrophic lateral sclerosis pathway; forkhead class A signaling pathway; hypertension pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute kidney failure (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955407 31261451 31267657 + 102014981 AGCD01007644;AGCD01007645;GBDF01011265;XM_013504103 XP_013359557 MODEL 9064871 protein-coding LOC102024639 keratin-associated protein 9-1-like NW_004955451 15671886 15690953 + 102024639 AGCD01043631;AGCD01043632;AGCD01043633;AGCD01043634;XM_013519129 XP_013374583 MODEL 8908971 protein-coding Hic1 HIC ZBTB transcriptional repressor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Gastrointestinal Neoplasms (ortholog); macular degeneration (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955481 1179015 1182936 - 102011660 AGCD01056827;AGCD01056828;GBBH01208306;XM_005402595;XM_005402596;XM_005402597 XP_005402652;XP_005402653;XP_005402654 MODEL 8764021 protein-coding LOC102023698 C-C motif chemokine 23 NW_004955481 10359882 10363841 - 102023698 AGCD01057144;GBDK01013031;XM_005402899;XM_013503335 XP_005402956;XP_013358789 MODEL 9045561 protein-coding Plp1 proteolipid protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); structural constituent of myelin sheath (ortholog); INVOLVED IN AMPA selective glutamate receptor signaling pathway (ortholog); astrocyte development (ortholog); axon development (ortholog); ASSOCIATED WITH Chronic Relapsing Experimental Autoimmune Encephalomyelitis (ortholog); epilepsy (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN integrin alphav-beta3 complex (ortholog); myelin sheath (ortholog); plasma membrane (ortholog) NW_004955548 781522 797246 + 102028341 AGCD01072341;GBDK01179399;XM_005411997;XM_005411998 XP_005412054;XP_005412055 MODEL 8869568 protein-coding Myl4 myosin light chain 4 ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); muscle contraction (ortholog); regulation of the force of heart contraction (ortholog); ASSOCIATED WITH Atrial Dilation and Standstill (ortholog); cardiomyopathy (ortholog); familial atrial fibrillation (ortholog); FOUND IN A band (ortholog) NW_004955478 9878074 9927793 - 102012093 AGCD01056101;AGCD01056102;AGCD01056103;AGCD01056104;AGCD01056105;AGCD01056106;AGCD01056107;AGCD01056108;AGCD01056109;GBDF01000351;XM_005402254 XP_005402311 MODEL 8990598 protein-coding Faslg Fas ligand ENCODES a protein that exhibits cytokine activity (ortholog); death receptor binding (ortholog); tumor necrosis factor receptor binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to type II interferon (ortholog); endosomal lumen acidification (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Experimental Pancreatitis (ortholog); Acute Hepatitis (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955406 13098479 13107045 + 102003617 AGCD01005932;GBDK01238818;XM_005374864;XM_013520746 XP_005374921;XP_013376200 MODEL 8844732 protein-coding LOC102006443 natural killer cells antigen CD94-like NW_004955413 7595934 7604789 - 102006443 AGCD01013826;AGCD01013827;GBDF01001494;XM_005378931;XR_260067;XR_260068 XP_005378988 MODEL 8827910 ncrna LOC102005020 uncharacterized LOC102005020 NW_004955467 11742739 11757242 - 102005020 AGCD01051616;AGCD01051617;GBDF01289227;XR_263362 MODEL 8805661 protein-coding Gnat2 G protein subunit alpha transducin 2 ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN background adaptation (ortholog); camera-type eye development (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 1 (ortholog); achromatopsia 4 (ortholog); FOUND IN cone photoreceptor disc membrane (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) NW_004955435 13009147 13021968 - 102006274 AGCD01033177;GBDK01039963;XM_005388881 XP_005388938 MODEL 8955665 protein-coding LOC102007953 olfactory receptor 2B6-like NW_004955576 1156143 1157078 + 102007953 AGCD01075361;XM_005413942 XP_005413999 MODEL 8729827 pseudo LOC102021561 elongation factor 1-beta pseudogene NW_004955420 8719850 8724682 - 102021561 AGCD01020731 MODEL 8817903 ncrna LOC102006066 uncharacterized LOC102006066 NW_004955518 1072445 1103749 + 102006066 AGCD01067755;AGCD01067756;GBDF01079167;XR_264564 MODEL 8798615 protein-coding Mmp20 matrix metallopeptidase 20 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN amelogenesis (ortholog); extracellular matrix disassembly (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta hypomaturation type 2A2 (ortholog); autistic disorder (ortholog) NW_004955412 5815450 5869016 - 102014877 AGCD01012658;AGCD01012659;AGCD01012660;GBDF01014296;XM_005377979;XM_013511099 XP_005378036;XP_013366553 MODEL 8713631 protein-coding Tspan15 tetraspanin 15 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) NW_004955437 21643018 21687355 - 102022633 AGCD01034919;GBDI01066539;XM_005390084;XM_013517075;XM_013517076 XP_005390141;XP_013372529;XP_013372530 MODEL 8859207 protein-coding Ptpn2 protein tyrosine phosphatase non-receptor type 2 ENCODES a protein that exhibits integrin binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); erythrocyte differentiation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); Crohn's disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955402 771410 846671 + 102008478 AGCD01000033;AGCD01000034;GBCE01096711;XM_005372550;XM_013513054;XM_013513107;XM_013513139;XM_013513163;XM_013513183;XM_013513207;XM_013513238;XM_013513272;XM_013513296;XM_013513319;XM_013513343 XP_005372607;XP_013368508;XP_013368561;XP_013368593;XP_013368617;XP_013368637;XP_013368661;XP_013368692;XP_013368726;XP_013368750;XP_013368773;XP_013368797 MODEL 8727236 protein-coding Dok3 docking protein 3 INVOLVED IN Ras protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955408 29740606 29747986 - 102029831 AGCD01008770;GBDK01360031;XM_005376448;XM_013506590;XM_013506594 XP_005376505;XP_013362044;XP_013362048 MODEL 8775130 protein-coding LOC102012581 uncharacterized LOC102012581 NW_004955437 3361650 3366877 + 102012581 AGCD01034309;GBDF01223138;XM_013516728 XP_013372182 MODEL 10088582 ncrna LOC106149319 uncharacterized LOC106149319 NW_004955442 18474251 18509325 + 106149319 AGCD01038007;AGCD01038008;AGCD01038009;GBDK01308117;XR_001235418;XR_001235419 MODEL 8762009 pseudo LOC102005367 complement component 1 Q subcomponent-binding protein, mitochondrial pseudogene NW_004955414 29861056 29862411 - 102005367 AGCD01015717 MODEL 9006042 pseudo LOC102003633 cohesin subunit SA-1 pseudogene NW_004955463 594311 597367 + 102003633 AGCD01049490 MODEL 9029641 ncrna LOC102025352 uncharacterized LOC102025352 NW_004955415 29717377 29729552 + 102025352 AGCD01016654;GBBH01180208;XR_260323 MODEL 8716588 protein-coding LOC102009036 60S ribosomal protein L5 NW_004955469 9922760 9923788 - 102009036 AGCD01052521;XM_005400516 XP_005400573 MODEL 8731161 protein-coding Gpr157 G protein-coupled receptor 157 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN circadian behavior (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); radial glial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN ciliary membrane (ortholog) NW_004955486 4172515 4188887 + 102022607 AGCD01059057;GBBH01066894;GBCB01001213;XM_005404310 XP_005404367 MODEL 10271969 ncrna LOC106147174 uncharacterized LOC106147174 NW_004955524 2359078 2365515 - 106147174 AGCD01068810;AGCD01068811;GBDF01277515;XR_001231952 MODEL 8770945 pseudo LOC102003261 40S ribosomal protein S20 pseudogene NW_004955501 30940 31292 + 102003261 AGCD01063987 MODEL 8926409 protein-coding Bnipl BCL2 interacting protein like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); negative regulation of cell population proliferation (ortholog); regulation of growth rate (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955588 409509 417825 + 102021295 AGCD01076109;GBCC01012774;XM_005414480;XM_005414481;XM_005414482;XR_001232525 XP_005414537;XP_005414538;XP_005414539 MODEL 8999270 protein-coding Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955451 10976748 10982482 - 102029352 AGCD01043338;GBCB01111308;XM_005394122 XP_005394179 MODEL 8746093 protein-coding Dcaf12 DDB1 and CUL4 associated factor 12 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN regulation of autophagy (ortholog); T cell activation (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955472 1943477 1974938 + 102006238 AGCD01053424;AGCD01053425;GBCQ01123987;GBDF01044441;XM_005401095 XP_005401152 MODEL 8755190 protein-coding Hoxc12 homeobox C12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955458 1213269 1214835 + 102026078 AGCD01047172;XM_005397196 XP_005397253 MODEL 39132421 snrna U6 U6 spliceosomal RNA 8839242 protein-coding CUNH2orf76 chromosome unknown C2orf76 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955459 10347766 10406189 + 102022890 AGCD01048186;AGCD01048187;AGCD01048188;GBBH01102075;GBDI01291657;XM_013521083;XM_013521084 XP_013376537;XP_013376538 MODEL 10384357 pseudo LOC102010218 Ig heavy chain V-III region 23-like NW_004957635 267 750 + 102010218 AGCD01081031 MODEL 8989543 protein-coding Dmc1 DNA meiotic recombinase 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA strand exchange activity (ortholog); identical protein binding (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); double-strand break repair via homologous recombination (ortholog); female meiosis I (ortholog); ASSOCIATED WITH azoospermia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); condensed nuclear chromosome (ortholog) NW_004955413 24685311 24724269 - 102020645 AGCD01014374;AGCD01014375;AGCD01014376;AGCD01014377;AGCD01014378;GBDF01224109;XM_005379261 XP_005379318 MODEL 9033409 protein-coding Atf7ip activating transcription factor 7 interacting protein ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); transcription coregulator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 11117369 11261787 + 102023996 AGCD01013952;AGCD01013953;AGCD01013954;AGCD01013955;AGCD01013956;GBCE01146003;XM_005378989;XM_005378990;XM_013511437;XM_013511438;XM_013511439;XM_013511440 XP_005379046;XP_005379047;XP_013366891;XP_013366892;XP_013366893;XP_013366894 MODEL 8964199 protein-coding Ctnnbl1 catenin beta like 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); somatic diversification of immunoglobulins (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); Prp19 complex (ortholog) NW_004955445 18809389 18975858 - 102016960 AGCD01039906;AGCD01039907;AGCD01039908;GBBH01188717;XM_005392553;XM_005392554 XP_005392610;XP_005392611 MODEL 8779454 protein-coding Garem1 GRB2 associated regulator of MAPK1 subtype 1 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); epidermal growth factor receptor signaling pathway (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955402 19469652 19663654 - 102021821 AGCD01000563;AGCD01000564;GBCQ01013559;GBDF01160853;XM_005372754 XP_005372811 MODEL 8972222 pseudo LOC102007555 eukaryotic translation initiation factor 2A-like NW_004955484 7623437 7625083 + 102007555 AGCD01058340 MODEL 8810076 protein-coding Klf10 KLF transcription factor 10 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to endothelin (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955417 27165146 27168604 - 102019170 AGCD01018535;GBCB01026324;GBCB01038374;XM_005381943 XP_005382000 MODEL 8845286 protein-coding LOC102023269 calmodulin-like protein 3 ASSOCIATED WITH hepatocellular carcinoma (ortholog); Lung Neoplasms (ortholog); Neoplasm Metastasis (ortholog) NW_004955421 22205476 22219715 + 102023269 AGCD01022128;GBDI01217492;XM_013513788;XM_013513789;XR_001233870;XR_001233871;XR_001233872;XR_001233873;XR_001233874 XP_013369242;XP_013369243 MODEL 8933390 pseudo LOC102024640 SLAIN motif-containing protein 2 pseudogene NW_004955404 30188761 30197752 + 102024640 AGCD01004000 MODEL 8965657 pseudo LOC102025357 caspase-3-like NW_004955417 10514744 10515995 + 102025357 AGCD01018075;AGCD01018076 MODEL 9061091 protein-coding LOC102023641 mimitin, mitochondrial NW_004955443 7676051 7676896 + 102023641 AGCD01038293;XM_005391974 XP_005392031 MODEL 8911167 protein-coding Gpr158 G protein-coupled receptor 158 ENCODES a protein that exhibits enzyme activator activity (ortholog); G protein-coupled glycine receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN brain development (ortholog); cognition (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN membrane (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955429 3641764 4053860 - 102006800 AGCD01028469;AGCD01028470;AGCD01028471;AGCD01028472;AGCD01028473;AGCD01028474;AGCD01028475;AGCD01028476;AGCD01028477;AGCD01028478;AGCD01028479;GBCB01051533;XM_005386897 XP_005386954 MODEL 8890055 protein-coding Nefm neurofilament medium chain ENCODES a protein that exhibits protein-containing complex binding (ortholog); signaling receptor binding (ortholog); toxic substance binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); axon regeneration (ortholog); cellular response to estradiol stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); cytoskeleton (ortholog); intermediate filament (ortholog) NW_004955403 47920408 47926922 + 102021617 AGCD01002903;XM_005373708 XP_005373765 MODEL 39131315 protein-coding NYX nyctalopin 8817638 protein-coding Bcat1 branched chain amino acid transaminase 1 ENCODES a protein that exhibits branched-chain-amino-acid:2-oxoglutarate transaminase activity (ortholog); identical protein binding (ortholog); L-isoleucine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); L-isoleucine catabolic process (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955413 19975395 20087656 - 102028072 AGCD01014204;AGCD01014205;AGCD01014206;AGCD01014207;AGCD01014208;GBDF01118828;XM_005379094;XM_013511614 XP_005379151;XP_013367068 MODEL 8784127 protein-coding LOC102005024 mucosal pentraxin-like NW_004955468 11064309 11067510 + 102005024 AGCD01052113;XM_005400166 XP_005400223 MODEL 8754871 ncrna LOC102012171 uncharacterized LOC102012171 NW_004955462 1256543 1258197 + 102012171 AGCD01049105;GBDF01021159;XR_263088 MODEL 8943256 protein-coding Fasn fatty acid synthase ENCODES a protein that exhibits (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (ortholog); 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); 3-oxoacyl-[acyl-carrier-protein] synthase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cell development (ortholog); cellular response to interleukin-4 (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fatty acid synthase complex (ortholog) NW_004955506 1063002 1079939 + 102015030 AGCD01065242;GBDF01082381;XM_005407214 XP_005407271 MODEL 9062049 ncrna LOC102006068 uncharacterized LOC102006068 NW_004955522 4443395 4446145 - 102006068 AGCD01068417;GBDF01236174;XR_001231902 MODEL 8974647 protein-coding CUNH2orf80 chromosome unknown C2orf80 homolog ASSOCIATED WITH urinary bladder cancer (ortholog) NW_004955457 6940355 6961464 + 102007305 AGCD01046861;GBDJ01410635;XM_005396967;XM_005396968;XM_013520672 XP_005397024;XP_005397025;XP_013376126 MODEL 8723546 protein-coding Tspan16 tetraspanin 16 ASSOCIATED WITH sarcoma (ortholog) NW_004955495 2234098 2249884 + 102018409 AGCD01061756;AGCD01061757;AGCD01061758;AGCD01061759;GBDF01001019;GBDF01058236;XM_005405647;XM_005405648 XP_005405704;XP_005405705 MODEL 8814246 protein-coding Mmp21 matrix metallopeptidase 21 INVOLVED IN coronary vasculature development (ortholog); determination of heart left/right asymmetry (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); congenital heart disease (ortholog) NW_004955477 3650874 3658059 - 102008846 AGCD01055559;GBDF01247003;XM_005401995 XP_005402052 MODEL 8707675 ncrna LOC102003635 uncharacterized LOC102003635 NW_004955412 994166 1000278 + 102003635 AGCD01012505;GBDF01113084;XR_259960 MODEL 8985996 pseudo LOC102003264 PHD finger protein 7-like NW_004955429 11735749 11737540 - 102003264 AGCD01028693 MODEL 8852971 protein-coding Hic2 HIC ZBTB transcriptional repressor 2 ASSOCIATED WITH colon adenocarcinoma (ortholog); megacolon (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 17610042 17643381 + 102018658 AGCD01037974;AGCD01037975;GBDK01056946;XM_005391713;XM_005391714 XP_005391770;XP_005391771 MODEL 9054062 protein-coding Dennd4a DENN domain containing 4A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955450 9723234 9851303 + 102003506 AGCD01042596;AGCD01042597;AGCD01042598;AGCD01042599;AGCD01042600;GBDI01262700;XM_005393707;XM_005393708;XM_005393709;XM_005393710;XM_005393711;XM_005393712;XM_005393713 XP_005393764;XP_005393765;XP_005393766;XP_005393767;XP_005393768;XP_005393769;XP_005393770 MODEL 9064849 ncrna LOC102022906 uncharacterized LOC102022906 NW_004955413 29120096 29125411 + 102022906 AGCD01014576;GBDJ01413290;XR_001233034;XR_260123 MODEL 10200341 pseudo LOC102010988 Ig heavy chain V-I region 5-like NW_004955470 403274 403787 - 102010988 AGCD01052609 MODEL 8935775 ncrna LOC102013672 uncharacterized LOC102013672 NW_004955402 58006268 58037026 - 102013672 AGCD01001520;AGCD01001521;GBDJ01205595;XR_001232983 MODEL 39134415 misc_rna 7SK 7SK RNA 8960089 protein-coding Dcaf12l2 DDB1 and CUL4 associated factor 12 like 2 NW_004955473 8744863 8746589 + 102016914 AGCD01054058;XM_005401272 XP_005401329 MODEL 39132198 snrna U6 U6 spliceosomal RNA 8705218 pseudo LOC102018215 60S ribosomal protein L7 pseudogene NW_004955521 4288386 4289394 - 102018215 AGCD01068259 MODEL 8802796 protein-coding LOC102006450 cytochrome c oxidase assembly factor 5 INVOLVED IN copper ion homeostasis (ortholog); leukocyte differentiation (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 2 (ortholog); mitochondrial complex IV deficiency nuclear type 9 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955470 5042072 5051007 - 102006450 AGCD01052743;GBCE01159196;XM_005400725 XP_005400782 MODEL 10325963 protein-coding LOC106150111 tubulin beta-4B chain-like NW_004955465 10070773 10076073 + 106150111 AGCD01050500;XM_013521777 XP_013377231 MODEL 8758141 pseudo LOC102010222 small nuclear ribonucleoprotein Sm D1 pseudogene NW_004955405 4117051 4117475 - 102010222 AGCD01004644;XM_005374670 MODEL 9001443 protein-coding Gnat3 G protein subunit alpha transducin 3 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); response to nicotine (ortholog); sensory perception of bitter taste (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Familial Pancreatic Carcinoma (ortholog); male infertility (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); axoneme (ortholog) NW_004955410 5145768 5211594 + 102006102 AGCD01010680;AGCD01010681;GBCE01099911;XM_005377202;XM_013510593 XP_005377259;XP_013366047 MODEL 8939194 protein-coding Isl1 ISL LIM homeobox 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN atrial septum morphogenesis (ortholog); axon regeneration (ortholog); cardiac cell fate determination (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); atrial heart septal defect (ortholog); congenital heart disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955446 15824956 15835000 - 102027796 AGCD01040309;GBBH01214419;XM_005392728 XP_005392785 MODEL 8751911 ncrna LOC102023993 uncharacterized LOC102023993 NW_004955412 31694982 31714129 + 102023993 AGCD01013343;GBDF01157393;XR_001232858;XR_001232859;XR_260033 MODEL 8986657 protein-coding Dok4 docking protein 4 INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); nervous system development (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955433 15104387 15116118 - 102027891 AGCD01031745;GBDK01146237;XM_005388394;XM_005388395;XM_005388396;XM_013516206;XM_013516207 XP_005388451;XP_005388452;XP_005388453;XP_013371660;XP_013371661 MODEL 8923000 protein-coding Sod2 superoxide dismutase 2 ENCODES a protein that exhibits DNA binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); apoptotic mitochondrial changes (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN hypertension pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute kidney tubular necrosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955439 21209101 21223538 + 102018438 AGCD01036146;AGCD01036147;AGCD01036148;GBBH01000815;XM_005390723 XP_005390780 MODEL 8905245 protein-coding Sgip1 SH3GL interacting endocytic adaptor 1 ENCODES a protein that exhibits microtubule binding (ortholog); phospholipid binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN energy homeostasis (ortholog); plasma membrane tubulation (ortholog); positive regulation of eating behavior (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); intellectual disability (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) NW_004955423 24155401 24353166 - 102019712 AGCD01024031;AGCD01024032;AGCD01024033;AGCD01024034;AGCD01024035;GBDK01397860;XM_013514516;XM_013514517;XM_013514518;XM_013514519;XM_013514520 XP_013369970;XP_013369971;XP_013369972;XP_013369973;XP_013369974 MODEL 8809451 protein-coding Ctnnd1 catenin delta 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH blepharocheilodontic syndrome 2 (ortholog); COVID-19 (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apicolateral plasma membrane (ortholog) NW_004955511 2658879 2705992 + 102022316 AGCD01066425;AGCD01066426;GBBH01032167;XM_005408012;XM_005408017;XM_005408018;XM_013506443;XM_013506444;XM_013506445;XM_013506446;XM_013506447;XM_013506448;XM_013506449;XM_013506450;XM_013506451 XP_005408069;XP_005408074;XP_005408075;XP_013361897;XP_013361898;XP_013361899;XP_013361900;XP_013361901;XP_013361902;XP_013361903;XP_013361904;XP_013361905 MODEL 8978065 protein-coding Dmd dystrophin ENCODES a protein that exhibits actin binding (ortholog); dystroglycan binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process (ortholog); bone development (ortholog); cardiac muscle cell action potential (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); cell junction (ortholog) NW_004955535 1283084 3297015 + 102027455 AGCD01070649;AGCD01070650;AGCD01070651;AGCD01070652;AGCD01070653;AGCD01070654;AGCD01070655;AGCD01070656;AGCD01070657;AGCD01070658;AGCD01070659;AGCD01070660;AGCD01070661;AGCD01070662;AGCD01070663;AGCD01070664;AGCD01070665;AGCD01070666;AGCD01070667;AGCD01070668;AGCD01070669;AGCD01070670;AGCD01070671;AGCD01070672;AGCD01070673;AGCD01070674;AGCD01070675;AGCD01070676;AGCD01070677;AGCD01070678;AGCD01070679;AGCD01070680