# RGD-PIPELINE: ftp-file-extracts # MODULE: chinchilla-genes-version-2023-03-10 # GENERATED-ON: 2026/08/22 # PURPOSE: information about active chinchilla genes extracted from RGD database # CONTACT: rgd.data@mcw.edu # FORMAT: tab delimited text # NOTES: multiple values in a single column are separated by ';' # #COLUMN INFORMATION: #1 GENE_RGD_ID RGD_ID of the gene #2 GENE_TYPE gene type #3 SYMBOL official gene symbol #4 NAME gene name #5 GENE_DESC gene description (if available) #6 CONTIG contig acc id #7 START_POS start position within contig #8 STOP_POS stop position within contig #9 STRAND strand information #10 NCBI_GENE_ID NCBI Gene ID #11 GENBANK_NUCLEOTIDE GenBank Nucleotide ID(s) #12 GENBANK_PROTEIN GenBank Protein ID(s) #13 GENE_REFSEQ_STATUS gene RefSeq Status (from NCBI) 8877913 ncrna LOC102009962 uncharacterized LOC102009962 NW_004955423 22423709 22437613 + 102009962 AGCD01023966;GBDF01176631;XR_260987 MODEL 10116242 protein-coding LOC106150306 translation initiation factor IF-2-like NW_004955471 10315810 10317324 - 106150306 AGCD01053229;GBDJ01061454;GBDK01042773;XM_013522867 XP_013378321 MODEL 8699537 protein-coding Entrep1 endosomal transmembrane epsin interactor 1 ENCODES a protein that exhibits ubiquitin ligase activator activity (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); negative adaptation of signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) NW_004955434 3615284 3704014 - 102004633 AGCD01032137;AGCD01032138;AGCD01032139;AGCD01032140;AGCD01032141;GBBH01142742;GBCB01007711;XM_005388562 XP_005388619 MODEL 8946846 protein-coding Adprhl1 ADP-ribosylhydrolase like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog) NW_004955404 494185 512295 + 102005215 AGCD01003202;GBCE01042504;XM_005373948;XM_005373949 XP_005374005;XP_005374006 MODEL 8946519 protein-coding Cip2a cellular inhibitor of PP2A ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN broken chromosome clustering (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955427 9448102 9480729 - 102017796 AGCD01027101;GBDF01047827;XM_005386362;XM_013515128 XP_005386419;XP_013370582 MODEL 39134433 misc_rna 7SK 7SK RNA 39134434 misc_rna 7SK 7SK RNA 39134435 misc_rna 7SK 7SK RNA 39134436 misc_rna 7SK 7SK RNA 39134437 misc_rna 7SK 7SK RNA 39134438 misc_rna 7SK 7SK RNA 39134439 misc_rna 7SK 7SK RNA 39134440 misc_rna 7SK 7SK RNA 39134441 misc_rna 7SK 7SK RNA 39134442 misc_rna 7SK 7SK RNA 10121491 ncrna LOC106150307 uncharacterized LOC106150307 NW_004955471 10721212 10724134 - 106150307 AGCD01053234;GBDF01112970;XR_001237042 MODEL 9002159 pseudo LOC102005784 SH2B adapter protein 1 pseudogene NW_004955464 13239686 13248332 - 102005784 AGCD01050265;XM_005398719 MODEL 8849575 protein-coding Adprm ADP-ribose/CDP-alcohol diphosphatase, manganese dependent ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); CDP-glycerol diphosphatase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955467 6505957 6519823 - 102030403 AGCD01051416;GBCQ01154845;XM_005399358;XM_005399359 XP_005399415;XP_005399416 MODEL 8869535 protein-coding LOC102009964 vegetative cell wall protein gp1-like NW_004955495 4922998 4925566 + 102009964 AGCD01061964;GBCQ01088688;XM_005406155 XP_005406212 MODEL 8971942 protein-coding Entrep2 endosomal transmembrane epsin interactor 2 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955416 29103925 29389149 + 102020337 AGCD01017645;AGCD01017646;AGCD01017647;AGCD01017648;AGCD01017649;AGCD01017650;AGCD01017651;AGCD01017652;AGCD01017653;AGCD01017654;AGCD01017655;GBDF01273920;XM_013512428 XP_013367882 MODEL 8908324 protein-coding Cipc CLOCK interacting pacemaker INVOLVED IN negative regulation of circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 1016721 1036379 + 102007938 AGCD01034970;GBDF01042048;XM_005390168;XM_005390169;XM_005390170;XM_005390171;XM_005390172;XM_005390175;XM_005390176;XM_005390177;XM_005390178;XM_013517172;XM_013517173 XP_005390225;XP_005390226;XP_005390227;XP_005390228;XP_005390229;XP_005390232;XP_005390233;XP_005390234;XP_005390235;XP_013372626;XP_013372627 MODEL 9005425 protein-coding LOC102006874 immunoglobulin omega chain-like NW_004955455 6441139 6441749 + 102006874 AGCD01045796;GBDI01034310;XM_005396571 XP_005396628 MODEL 8700617 pseudo LOC102013904 zinc finger protein OZF-like NW_004955406 41519064 41522379 + 102013904 AGCD01006685 MODEL 8728506 protein-coding Bicra BRD4 interacting chromatin remodeling complex associated protein ENCODES a protein that exhibits transcription regulator activator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog); SWI/SNF complex (ortholog) NW_004955574 1463656 1484709 + 102018239 AGCD01075180;AGCD01075181;GBCB01112015;GBCE01142278;XM_013509545 XP_013364999 MODEL 39132215 rrna 5S_rRNA 5S ribosomal RNA 8878951 protein-coding Abhd3 abhydrolase domain containing 3, phospholipase ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN phosphatidylcholine metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955402 10316881 10355760 - 102018874 AGCD01000262;AGCD01000263;GBBH01092371;GBCE01099406;XM_013520539 XP_013375993 MODEL 39134269 misc_rna 7SK 7SK RNA 8777237 protein-coding Prcd photoreceptor disc component ENCODES a protein that exhibits opsin binding (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); microglial cell migration (ortholog); neural retina development (ortholog); ASSOCIATED WITH retinitis pigmentosa 36 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955506 5751963 5764767 - 102022411 AGCD01065386;GBDF01214040;XM_005407426;XM_013506079;XM_013506080 XP_005407483;XP_013361533;XP_013361534 MODEL 8999932 protein-coding Trim69 tripartite motif containing 69 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of cGAS/STING signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); multisystem inflammatory syndrome in children (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955409 8376449 8394651 - 102024980 AGCD01009402;AGCD01009403;AGCD01009404;AGCD01009405;AGCD01009406;GBDF01053402;XM_005376746 XP_005376803 MODEL 8885644 pseudo LOC102011971 60S ribosomal protein L3 pseudogene NW_004955468 5498734 5501315 - 102011971 AGCD01051971;XR_263421 MODEL 9035258 protein-coding Lmx1b LIM homeobox transcription factor 1 beta ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); camera-type eye development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH clubfoot (ortholog); Developmental Disabilities (ortholog); disease of mental health (ortholog); FOUND IN nucleus (ortholog) NW_004955419 1782566 1857375 - 102010371 AGCD01019658;AGCD01019659;GBCE01047362;XM_005382450;XM_005382451 XP_005382507;XP_005382508 MODEL 8915793 protein-coding Cdh16 cadherin 16 INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); thyroid cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955433 23413904 23423324 - 102025500 AGCD01031960;GBCQ01109409;XM_005388482;XM_005388483;XM_013516092;XM_013516093 XP_005388539;XP_005388540;XP_013371546;XP_013371547 MODEL 8707537 protein-coding Bspry B-box and SPRY domain containing INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955419 14124167 14139181 - 102027074 AGCD01020012;GBCE01170004;GBDI01012219;XM_013513135 XP_013368589 MODEL 39131984 rrna 5S_rRNA 5S ribosomal RNA 9014314 protein-coding Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 INVOLVED IN behavioral fear response (ortholog); equilibrioception (ortholog); locomotor rhythm (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955451 6269168 6656763 - 102014966 AGCD01043201;AGCD01043202;AGCD01043203;AGCD01043204;AGCD01043205;AGCD01043206;AGCD01043207;AGCD01043208;GBDJ01075914;XM_005394074;XM_005394075;XM_013519405;XM_013519406;XM_013519407;XM_013519408 XP_005394131;XP_005394132;XP_013374859;XP_013374860;XP_013374861;XP_013374862 MODEL 9060024 ncrna LOC102009556 uncharacterized LOC102009556 NW_004955444 690141 694617 - 102009556 AGCD01038682;GBCE01026109;XR_262224;XR_262225 MODEL 9000044 protein-coding Akr1d1 aldo-keto reductase family 1 member D1 ENCODES a protein that exhibits 3-oxo-5-beta-steroid 4-dehydrogenase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); bile acid biosynthetic process (ortholog); C21-steroid hormone metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); congenital bile acid synthesis defect (ortholog); congenital bile acid synthesis defect 2 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955494 4799706 4856100 - 102005608 AGCD01061511;AGCD01061512;GBCQ01005906;XM_005405462 XP_005405519 MODEL 8790732 pseudo LOC102018148 fructose-bisphosphate aldolase A pseudogene NW_004955403 51024231 51025067 - 102018148 AGCD01002985 MODEL 8883047 protein-coding LOC102013156 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10918926 10962941 - 102013156 AGCD01051587;AGCD01051588;AGCD01051589;AGCD01051590;XM_013522040 XP_013377494 MODEL 8778320 pseudo LOC102011560 uncharacterized protein C8orf59 homolog NW_004955500 5318759 5319643 - 102011560 AGCD01063830 MODEL 8959152 ncrna LOC102004713 uncharacterized LOC102004713 NW_004955485 7094407 7100426 - 102004713 AGCD01058634;GBDI01190651;XR_263916 MODEL 39134443 misc_rna 7SK 7SK RNA 8981421 protein-coding Cct5 chaperonin containing TCP1 subunit 5 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); beta-tubulin binding (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal recessive sensory neuropathy with spastic paraplegia (ortholog); Breast Neoplasms (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) NW_004955426 132106 144251 + 102030333 AGCD01025996;GBDF01003289;XM_005386112 XP_005386169 MODEL 9012636 protein-coding Serpinf2 serpin family F member 2 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); collagen fibril organization (ortholog); maintenance of blood vessel diameter homeostasis by renin-angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alpha-2-plasmin inhibitor deficiency (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); fibrinogen complex (ortholog) NW_004955481 1441262 1449078 - 102016267 AGCD01056832;GBCQ01033980;XM_005402606;XM_005402607 XP_005402663;XP_005402664 MODEL 8970638 protein-coding LOC102003963 platelet basic protein-like NW_004955474 308503 310298 + 102003963 AGCD01054213;GBCQ01144875;XM_005401302 XP_005401359 MODEL 8715509 protein-coding CUNH22orf23 chromosome unknown C22orf23 homolog ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 24291712 24300294 - 102012847 AGCD01014360;GBDF01011259;XM_005379234;XM_013511473 XP_005379291;XP_013366927 MODEL 8816792 protein-coding Rbm12b RNA binding motif protein 12B ASSOCIATED WITH myoepithelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955417 10067672 10097381 - 102019913 AGCD01018065;AGCD01018066;GBDF01211556;XM_005381790;XM_005381796;XM_013512761;XM_013512762;XM_013512763;XM_013512764;XM_013512765;XM_013512766;XM_013512768;XM_013512769;XM_013512770;XM_013512771;XR_001233430;XR_001233431;XR_001233432 XP_005381847;XP_005381853;XP_013368215;XP_013368216;XP_013368217;XP_013368218;XP_013368219;XP_013368220;XP_013368222;XP_013368223;XP_013368224;XP_013368225 MODEL 8919619 protein-coding Cep120 centrosomal protein 120 INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); atrial heart septal defect (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955521 1452514 1504763 - 102010619 AGCD01068186;GBDF01090147;GBDF01090149;XM_013507086 XP_013362540 MODEL 9048585 ncrna LOC102010759 uncharacterized LOC102010759 NW_004955403 1971342 1976194 - 102010759 AGCD01001728;GBDF01124321;XR_259134 MODEL 9022999 protein-coding Asb6 ankyrin repeat and SOCS box containing 6 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955570 1747965 1752728 - 102021059 AGCD01074828;GBCQ01122581;XM_005413630;XM_005413631;XM_005413634 XP_005413687;XP_005413688;XP_005413691 MODEL 8996456 protein-coding Snrnp27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 ASSOCIATED WITH atrial fibrillation (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN precatalytic spliceosome (ortholog); spliceosomal complex (ortholog); U4/U6 x U5 tri-snRNP complex (ortholog) NW_004955424 15243190 15251831 - 102013100 AGCD01024700;GBDF01118203;XM_005385637;XM_013514749;XM_013514750;XR_001234249;XR_001234250 XP_005385694;XP_013370203;XP_013370204 MODEL 39134134 misc_rna 7SK 7SK RNA 8881533 protein-coding LOC102022261 proline-rich nuclear receptor coactivator 2-like NW_004955462 14718733 14721852 + 102022261 AGCD01049456;XM_005398309;XM_013521432 XP_005398366;XP_013376886 MODEL 39133459 misc_rna 7SK 7SK RNA 8829829 protein-coding Apc APC regulator of WNT signaling pathway ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); dynein complex binding (ortholog); INVOLVED IN ammonium homeostasis (ortholog); anterior/posterior pattern specification (ortholog); axis specification (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Abdominal Fibromatosis (ortholog); Aberrant Crypt Foci (ortholog); acinar cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); axonal growth cone (ortholog) NW_004955418 2567804 2675062 - 102010905 AGCD01018773;GBDF01009002;XM_005382146;XM_005382148;XM_013512936;XM_013512937;XM_013512938;XM_013512940;XM_013512941;XM_013512942;XM_013512943 XP_005382203;XP_005382205;XP_013368390;XP_013368391;XP_013368392;XP_013368394;XP_013368395;XP_013368396;XP_013368397 MODEL 39131436 protein-coding IGLV9-49 immunoglobulin lambda variable 9-49 8769933 protein-coding Casp8 caspase 8 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); cysteine-type endopeptidase activity (ortholog); death effector domain binding (ortholog); INVOLVED IN response to auditory stimulus; angiogenesis (ortholog); apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; extrinsic apoptotic pathway; FasL mediated signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN caspase complex (ortholog); CD95 death-inducing signaling complex (ortholog); cell body (ortholog) NW_004955403 322082 348591 - 102023097 AGCD01001688;AGCD01001689;GBDK01089606;XM_005373209;XM_005373210;XM_005373212;XM_013511750 XP_005373266;XP_005373267;XP_005373269;XP_013367204 MODEL 9034052 protein-coding Actr6 actin related protein 6 INVOLVED IN nucleolus organization (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog); Swr1 complex (ortholog) NW_004955405 35942690 35962422 + 102020411 AGCD01005405;GBDF01304007;XM_005374528 XP_005374585 MODEL 8730209 pseudo LOC102013556 calmodulin-like NW_004955442 9087589 9088397 + 102013556 AGCD01037662 MODEL 10122869 protein-coding Atp5me ATP synthase membrane subunit e ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH heart disease (ortholog); Mesothelioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955404 11420964 11421171 - 106149131 AGCD01003426;XM_013517042 XP_013372496 MODEL 8859989 protein-coding Slc27a6 solute carrier family 27 member 6 ENCODES a protein that exhibits very long-chain fatty acid-CoA ligase activity (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955415 1973308 2041800 + 102007331 AGCD01015887;AGCD01015888;AGCD01015889;AGCD01015890;AGCD01015891;GBDF01251048;XM_005380551;XM_005380552 XP_005380608;XP_005380609 MODEL 9006213 protein-coding Disp3 dispatched RND transporter family member 3 INVOLVED IN negative regulation of neuron differentiation (ortholog); positive regulation of lipid metabolic process (ortholog); positive regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955486 2290413 2335193 - 102010164 AGCD01058995;GBDJ01220566;XM_005404001 XP_005404058 MODEL 10249378 ncrna LOC106150308 uncharacterized LOC106150308 NW_004955471 5566 6321 - 106150308 AGCD01052945;GBDK01379019;XR_001237044 MODEL 8939181 protein-coding Fez2 fasciculation and elongation protein zeta 2 INVOLVED IN negative regulation of autophagosome assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955441 4421936 4456070 - 102027790 AGCD01036839;GBCQ01095795;GBDJ01316168;XM_013517614;XM_013517615 XP_013373068;XP_013373069 MODEL 9059997 protein-coding Cirbp cold inducible RNA binding protein ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); poly(U) RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to cold (ortholog); cytoplasmic stress granule assembly (ortholog); mRNA stabilization (ortholog); ASSOCIATED WITH Alcohol-Induced Disorders, Nervous System (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleoplasm (ortholog) NW_004955495 6634389 6640800 - 102008008 AGCD01062086;GBDF01003750;XM_005405981;XM_005405982;XM_005405984;XM_005405985;XM_013505298 XP_005406038;XP_005406039;XP_005406041;XP_005406042;XP_013360752 MODEL 8790185 protein-coding Entrep3 endosomal transmembrane epsin interactor 3 ENCODES a protein that exhibits WW domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955545 1703860 1710120 - 102023398 AGCD01071868;AGCD01071869;GBBH01067051;GBDK01395802;XM_013508339;XM_013508340 XP_013363793;XP_013363794 MODEL 8867228 protein-coding Rps20 ribosomal protein S20 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); structural constituent of ribosome (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN positive regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); Colorectal Cancer 10 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955454 15151065 15152301 - 102011276 AGCD01045486;GBCC01000215;XM_005396079 XP_005396136 MODEL 8866336 ncrna LOC102008048 uncharacterized LOC102008048 NW_004955403 45870106 45876316 - 102008048 AGCD01002838;GBDJ01116277;XR_259242 MODEL 8715985 protein-coding LOC102004351 NADH-cytochrome b5 reductase 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 38958766 38964597 - 102004351 AGCD01006614;GBDK01276274;XM_005375237 XP_005375294 MODEL 8916580 ncrna LOC102008434 uncharacterized LOC102008434 NW_004955424 11874487 11899092 + 102008434 AGCD01024575;AGCD01024576;GBDF01252131;XR_001234207;XR_001234208;XR_001234209;XR_001234210;XR_001234211;XR_001234212;XR_001234213;XR_261052 MODEL 8940064 pseudo LOC102005785 pleckstrin homology domain-containing family B member 2 pseudogene NW_004955411 11025058 11025724 + 102005785 AGCD01011800 MODEL 9047365 protein-coding LOC102007258 glycine N-phenylacetyltransferase-like NW_004955511 3686412 3716368 - 102007258 AGCD01066472;AGCD01066473;AGCD01066474;GBCQ01037301;XM_005408050;XM_005408051;XM_005408052;XM_005408054;XM_005408055;XM_013506345;XM_013506346 XP_005408107;XP_005408108;XP_005408109;XP_005408111;XP_005408112;XP_013361799;XP_013361800 MODEL 9036894 ncrna LOC102008813 uncharacterized LOC102008813 NW_004955452 14619352 14627007 - 102008813 AGCD01044473;GBDF01305185;XR_262691 MODEL 39132217 rrna 5S_rRNA 5S ribosomal RNA 8995292 protein-coding Adprs ADP-ribosylserine hydrolase ENCODES a protein that exhibits ADP-ribosylserine-[protein] hydrolase activity (ortholog); hydrolase activity, hydrolyzing O-glycosyl compounds (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular response to superoxide (ortholog); DNA repair (ortholog); negative regulation of necroptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) NW_004955452 14123590 14126522 + 102025866 AGCD01044452;GBCB01074091;XM_013519533 XP_013374987 MODEL 8886798 protein-coding CUNH22orf31 chromosome unknown C22orf31 homolog ASSOCIATED WITH cervical cancer (ortholog) NW_004955455 3290397 3302619 - 102024977 AGCD01045620;AGCD01045621;GBCE01031667;XM_013520305 XP_013375759 MODEL 9032256 protein-coding Cep126 centrosomal protein 126 INVOLVED IN cilium assembly (ortholog); cytoplasmic microtubule organization (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); midbody (ortholog) NW_004955412 5262018 5319275 + 102009157 AGCD01012624;GBBH01117515;GBDF01086443;XM_005377967;XM_013511124 XP_005378024;XP_013366578 MODEL 8826727 protein-coding Serping1 serpin family G member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of complement activation, lectin pathway (ortholog); PARTICIPATES IN coagulation cascade pathway; kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular region (ortholog) NW_004955511 2545337 2557850 + 102019092 AGCD01066414;GBCQ01008778;GBDF01198841;XM_013506484 XP_013361938 MODEL 8824995 protein-coding Plcd3 phospholipase C delta 3 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN angiogenesis (ortholog); labyrinthine layer blood vessel development (ortholog); regulation of cell population proliferation (ortholog); PARTICIPATES IN inositol metabolic pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955451 17822345 17827848 - 102023864 AGCD01043774;GBBH01230083;GBCE01115432;XM_005394564 XP_005394621 MODEL 39134270 misc_rna 7SK 7SK RNA 39131985 rrna 5S_rRNA 5S ribosomal RNA 8826518 protein-coding Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955409 37650220 37662950 - 102007865 AGCD01010533;GBDJ01073960;XM_005377129;XM_005377130 XP_005377186;XP_005377187 MODEL 8741063 protein-coding Vwa2 von Willebrand factor A domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog) NW_004955431 19224373 19274475 + 102016083 AGCD01030445;AGCD01030446;AGCD01030447;GBDI01115147;XM_005387824;XM_005387825;XM_013515834 XP_005387881;XP_005387882;XP_013371288 MODEL 8819520 pseudo LOC102009561 transcription elongation regulator 1 pseudogene NW_004955402 134030 135953 + 102009561 AGCD01000008 MODEL 8737599 protein-coding LOC102011975 olfactory receptor 52B2-like NW_004955414 21918896 21919849 - 102011975 AGCD01015437;XM_005380105 XP_005380162 MODEL 9068228 protein-coding Bicral BICRA like chromatin remodeling complex associated protein ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN SWI/SNF complex (ortholog) NW_004955437 8841830 8896391 + 102024273 AGCD01034501;AGCD01034502;AGCD01034503;AGCD01034504;AGCD01034505;AGCD01034506;GBDI01047312;XM_005389724;XM_005389725 XP_005389781;XP_005389782 MODEL 8752822 protein-coding Actr8 actin related protein 8 INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Ino80 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 3851758 3867291 - 102004741 AGCD01029229;AGCD01029230;GBDJ01007143;XM_005387376;XM_013515673 XP_005387433;XP_013371127 MODEL 8929991 pseudo LOC102009965 high mobility group nucleosome-binding domain-containing protein 3 pseudogene NW_004955497 1469748 1473082 - 102009965 AGCD01062462;XM_005406365 MODEL 9029472 protein-coding LOC102013159 uncharacterized LOC102013159 NW_004955413 887408 905781 + 102013159 AGCD01013494;GBBH01011689;XM_013511285 XP_013366739 MODEL 9065904 protein-coding Fezf1 FEZ family zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); cell dedifferentiation (ortholog); forebrain anterior/posterior pattern specification (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hypogonadotropic hypogonadism 22 with or without anosmia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955479 3945358 3953924 - 102009944 AGCD01056312;GBDF01087471;GBDF01087472;XM_005402319;XM_005402320;XM_013503255 XP_005402376;XP_005402377;XP_013358709 MODEL 8942912 protein-coding LOC102004714 potassium voltage-gated channel subfamily F member 1 NW_004955487 5789494 5793301 + 102004714 AGCD01059347;XM_005404422 XP_005404479 MODEL 9050250 protein-coding Trim7 tripartite motif containing 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) NW_004955530 119088 128353 + 102003481 AGCD01069830;GBDK01397066;XM_005410097;XM_005410098 XP_005410154;XP_005410155 MODEL 8800798 ncrna LOC102018152 uncharacterized LOC102018152 NW_004955452 7664103 7667411 - 102018152 AGCD01044180;GBDI01004050;XR_262660 MODEL 8727854 protein-coding Cdh17 cadherin 17 ENCODES a protein that exhibits integrin binding (ortholog); proton-dependent oligopeptide secondary active transmembrane transporter activity (ortholog); INVOLVED IN B cell differentiation (ortholog); calcium-dependent cell-cell adhesion (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955417 10370606 10441008 - 102023593 AGCD01018071;GBDK01077887;XM_005381802;XM_005381803;XM_005381804;XM_013512690 XP_005381859;XP_005381860;XP_005381861;XP_013368144 MODEL 8906143 protein-coding Cct6a chaperonin containing TCP1 subunit 6A ENCODES a protein that exhibits protein folding chaperone (ortholog); WD40-repeat domain binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of establishment of protein localization to telomere (ortholog); positive regulation of protein localization to Cajal body (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cell body (ortholog); chaperonin-containing T-complex (ortholog) NW_004955456 8223785 8236760 + 102029708 AGCD01046462;AGCD01046463;AGCD01046464;GBDK01011083;XM_005396698 XP_005396755 MODEL 8959329 protein-coding LOC102013908 interferon-inducible GTPase 1-like NW_004955408 2319577 2332098 - 102013908 AGCD01008004;AGCD01008005;AGCD01008006;GBDK01196295;XM_005376045;XM_013508135 XP_005376102;XP_013363589 MODEL 9021585 protein-coding Akr1e2 aldo-keto reductase family 1 member E2 ENCODES a protein that exhibits 1,5-anhydro-D-fructose reductase activity (ortholog); oxidoreductase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955429 714843 731285 - 102025823 AGCD01028373;GBBH01198200;XM_005386865 XP_005386922 MODEL 39134135 misc_rna 7SK 7SK RNA 8810622 protein-coding Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955482 5457159 5461694 - 102018093 AGCD01057330;AGCD01057331;GBCB01097803;GBDJ01187224;XM_005403037 XP_005403094 MODEL 8980172 protein-coding Rbm15 RNA binding motif protein 15 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); dosage compensation by inactivation of X chromosome (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); neuroblastoma (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) NW_004955435 13846297 13854639 + 102018321 AGCD01033212;GBDF01234226;XM_005388923 XP_005388980 MODEL 8796130 pseudo LOC102011563 serine/threonine-protein kinase Sgk1 pseudogene NW_004955426 24322315 24323612 + 102011563 AGCD01026676 MODEL 9049352 pseudo LOC102022262 prefoldin subunit 4 pseudogene NW_004955410 20756924 20757610 - 102022262 AGCD01011051 MODEL 8987547 protein-coding Casp8ap2 caspase 8 associated protein 2 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); Fas signaling pathway (ortholog); PARTICIPATES IN aldosterone signaling pathway; FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955411 16535646 16568139 - 102009361 AGCD01011977;GBCB01065579;XM_005377760;XM_005377761;XM_013510890;XM_013510891 XP_005377817;XP_005377818;XP_013366344;XP_013366345 MODEL 8773420 pseudo LOC102006876 heterogeneous nuclear ribonucleoprotein D-like pseudogene NW_004955407 20847561 20859445 - 102006876 AGCD01007345 MODEL 9040166 pseudo LOC102003968 striatin-3-like NW_004955483 708746 721428 - 102003968 AGCD01057628 MODEL 8857340 protein-coding Igsf1 immunoglobulin superfamily member 1 ENCODES a protein that exhibits activin receptor antagonist activity (ortholog); coreceptor activity (ortholog); inhibin binding (ortholog); INVOLVED IN negative regulation of activin receptor signaling pathway (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); congenital hypothyroidism (ortholog); FOUND IN membrane (ortholog) NW_004955473 3702471 3715506 + 102030300 AGCD01053935;GBDF01237848;XM_005401222;XM_013523048 XP_005401279;XP_013378502 MODEL 8989561 protein-coding Dixdc1 DIX domain containing 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in forebrain (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 13640693 13713926 + 102021643 AGCD01012843;AGCD01012844;GBDK01318184;XM_005378089;XM_005378092;XM_005378093;XM_005378094;XM_013511056;XM_013511057;XM_013511058;XM_013511059 XP_005378146;XP_005378149;XP_005378150;XP_005378151;XP_013366510;XP_013366511;XP_013366512;XP_013366513 MODEL 8779289 protein-coding Ankfy1 ankyrin repeat and FYVE domain containing 1 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); endosomal vesicle fusion (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Charlevoix-Saguenay spastic ataxia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955467 12644070 12734546 + 102014762 AGCD01051655;AGCD01051656;AGCD01051657;AGCD01051658;GBBH01166066;GBDI01129342;XM_013522066 XP_013377520 MODEL 8927714 protein-coding Lnp1 leukemia NUP98 fusion partner 1 ASSOCIATED WITH colorectal cancer (ortholog); melanoma (ortholog); NEURODEVELOPMENTAL DISORDER WITH EPILEPSY AND HYPOPLASIA OF THE CORPUS CALLOSUM (ortholog) NW_004955427 1929092 1956878 + 102021577 AGCD01026886;AGCD01026887;GBDF01000484;XM_005386296 XP_005386353 MODEL 8718562 ncrna LOC102013560 uncharacterized LOC102013560 NW_004955443 13036898 13044656 - 102013560 AGCD01038459;GBDF01022385;XR_262205 MODEL 39134444 misc_rna 7SK 7SK RNA 8726655 protein-coding Slc28a1 solute carrier family 28 member 1 ENCODES a protein that exhibits azole transmembrane transporter activity (ortholog); pyrimidine nucleobase transmembrane transporter activity (ortholog); pyrimidine- and adenosine-specific:sodium symporter activity (ortholog); INVOLVED IN azole transmembrane transport (ortholog); cytidine transport (ortholog); nucleoside import across plasma membrane (ortholog); PARTICIPATES IN capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; gemcitabine pharmacodynamics pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); esophageal cancer (ortholog); High Myopia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955416 14226411 14267962 - 102009715 AGCD01017248;AGCD01017249;GBCQ01101688;XM_005381488;XM_013512686;XM_013512687 XP_005381545;XP_013368140;XP_013368141 MODEL 8798030 protein-coding Rps21 ribosomal protein S21 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955528 1674744 1676114 - 102028572 AGCD01069568;GBDF01007140;XM_005410022;XM_005410024 XP_005410079;XP_005410081 MODEL 8849879 protein-coding LOC102010760 retinitis pigmentosa 9 protein NW_004955617 180456 193992 - 102010760 AGCD01077272;AGCD01077273;GBCE01004432;GBCE01098928;XM_013510144 XP_013365598 MODEL 8745287 protein-coding Apc2 APC regulator of WNT signaling pathway 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); autosomal recessive intellectual developmental disorder 74 (ortholog); Breast Neoplasms (ortholog); FOUND IN actin filament (ortholog); catenin complex (ortholog); cytoplasm (ortholog) NW_004955495 6466434 6489612 - 102003255 AGCD01062082;GBDF01209833;XM_005405966;XM_005405967 XP_005406023;XP_005406024 MODEL 8720374 protein-coding LOC102004352 tomoregulin-1-like NW_004955454 12413700 12441760 + 102004352 AGCD01045411;AGCD01045412;XM_013520017 XP_013375471 MODEL 8940320 protein-coding Bst1 bone marrow stromal cell antigen 1 ENCODES a protein that exhibits NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); regulation of actin cytoskeleton organization (ortholog); regulation of calcium-mediated signaling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, cyclic ribosylation; niacin metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); uropod (ortholog) NW_004955480 8273887 8304127 - 102015953 AGCD01056717;AGCD01056718;GBDJ01403584;XM_005402522 XP_005402579 MODEL 8943640 protein-coding Asb7 ankyrin repeat and SOCS box containing 7 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromosome organization (ortholog); cortical actin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); heterochromatin (ortholog) NW_004955416 27610011 27649186 + 102007337 AGCD01017618;GBDF01192819;XM_005381638 XP_005381695 MODEL 8833280 protein-coding Eny2 ENY2 transcription and export complex 2 subunit ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); poly(A)+ mRNA export from nucleus (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN DUBm complex (ortholog); nuclear pore nuclear basket (ortholog); SAGA complex (ortholog) NW_004955417 16750563 16760839 + 102022081 AGCD01018273;GBDF01088991;XM_005381877;XM_005381878 XP_005381934;XP_005381935 MODEL 39132219 rrna 5S_rRNA 5S ribosomal RNA 8877012 pseudo LOC102005786 transcription elongation factor B polypeptide 1 pseudogene NW_004955412 19308345 19308746 + 102005786 AGCD01012950;XM_005378228 MODEL 9056018 protein-coding Prcp prolylcarboxypeptidase ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); angiotensin maturation (ortholog); energy homeostasis (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH brain infarction (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN basal part of cell (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955414 9631223 9700537 + 102029731 AGCD01015031;GBDJ01083554;XM_005379809 XP_005379866 MODEL 8822490 pseudo LOC102008050 mitochondrial import receptor subunit TOM22 homolog pseudogene NW_004955452 2641703 2642225 - 102008050 AGCD01043901 MODEL 8791048 protein-coding LOC102008817 C4b-binding protein alpha chain-like NW_004955406 42709359 42715864 + 102008817 AGCD01006714;GBBH01192869;XM_005375486 XP_005375543 MODEL 9013641 protein-coding Serpinh1 serpin family H member 1 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN chondrocyte development involved in endochondral bone morphogenesis (ortholog); collagen biosynthetic process (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955414 16284845 16292828 - 102024992 AGCD01015208;GBCE01003981;XM_005379884;XM_005379885;XM_013512064 XP_005379941;XP_005379942;XP_013367518 MODEL 8703262 protein-coding Ciroz ciliated left-right organizer protein containing ZP-N domains INVOLVED IN determination of left/right symmetry (ortholog); establishment of left/right asymmetry (ortholog); heart development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); dextrocardia (ortholog); Kartagener syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 2691850 2717340 + 102020345 AGCD01059006;GBDF01112771;XM_005404305 XP_005404362 MODEL 9013972 protein-coding LOC102007259 olfactory receptor 5B3-like NW_004955511 3322239 3323164 - 102007259 AGCD01066458;GBDF01075823;XM_013506402 XP_013361856 MODEL 9059825 protein-coding Adra1a adrenoceptor alpha 1A ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN response to cocaine; adrenergic receptor signaling pathway (ortholog); adult heart development (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); bladder neck obstruction (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dopaminergic synapse (ortholog) NW_004955403 49394173 49485881 - 102029468 AGCD01002943;AGCD01002944;AGCD01002945;AGCD01002946;GBDF01041155;XM_013514140;XM_013514141;XM_013514144 XP_013369594;XP_013369595;XP_013369598 MODEL 10287377 pseudo LOC106150309 60S ribosomal protein L21-like NW_004955471 7170758 7171236 - 106150309 AGCD01053140 MODEL 8791822 protein-coding Atp5mf ATP synthase membrane subunit f ENCODES a protein that exhibits proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955460 15129651 15136722 - 102010455 AGCD01048768;GBCE01002331;XM_005397947 XP_005398004 MODEL 8718403 ncrna LOC102008436 uncharacterized LOC102008436 NW_004955501 720309 731808 + 102008436 AGCD01064038;GBDF01158739;XR_001231521 MODEL 8901591 protein-coding Fezf2 FEZ family zinc finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axonal fasciculation (ortholog); cell dedifferentiation (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); ASSOCIATED WITH Dwarfism (ortholog); epilepsy (ortholog); hypomyelinating leukodystrophy 5 (ortholog) NW_004955517 3439999 3443477 + 102025387 AGCD01067651;XM_005409044 XP_005409101 MODEL 8842280 protein-coding Vwa3a von Willebrand factor A domain containing 3A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955493 780808 829768 + 102009069 AGCD01060864;AGCD01060865;GBBH01001724;XM_005405057;XM_005405058;XM_005405059;XM_005405060;XM_005405061;XM_005405062;XM_005405063;XM_005405064;XM_013504833;XM_013504834;XM_013504836;XM_013504837;XM_013504838;XM_013504840;XR_001231282;XR_264065;XR_264066;XR_264067;XR_264068;XR_264069;XR_264070 XP_005405114;XP_005405115;XP_005405116;XP_005405117;XP_005405118;XP_005405119;XP_005405120;XP_005405121;XP_013360287;XP_013360288;XP_013360290;XP_013360291;XP_013360292;XP_013360294 MODEL 8730449 protein-coding Cep128 centrosomal protein 128 INVOLVED IN intracellular protein localization (ortholog); motile cilium assembly (ortholog); negative regulation of cilium assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955438 4194572 4601759 - 102025396 AGCD01035038;AGCD01035039;AGCD01035040;AGCD01035041;AGCD01035042;AGCD01035043;AGCD01035044;AGCD01035045;AGCD01035046;GBDF01080809;XM_005390234 XP_005390291 MODEL 39134271 misc_rna 7SK 7SK RNA 8927276 ncrna LOC102004716 uncharacterized LOC102004716 NW_004955421 23128250 23159410 + 102004716 AGCD01022173;GBDF01053857;XR_001233869;XR_260817 MODEL 8744770 protein-coding Plcd4 phospholipase C delta 4 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phospholipase C activity (ortholog); INVOLVED IN acrosome reaction (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955453 14775119 14812872 - 102006870 AGCD01044873;AGCD01044874;GBDK01398186;XM_013519913;XM_013519914;XM_013519915;XM_013519916;XM_013519917;XM_013519918;XM_013519920;XM_013519921;XM_013519922;XM_013519923;XM_013519924;XM_013519925 XP_013375367;XP_013375368;XP_013375369;XP_013375370;XP_013375371;XP_013375372;XP_013375374;XP_013375375;XP_013375376;XP_013375377;XP_013375378;XP_013375379 MODEL 8810340 pseudo LOC102003975 tubulin alpha-1 chain-like NW_004955420 23684889 23685741 + 102003975 AGCD01021253 MODEL 8746931 ncrna LOC102009563 uncharacterized LOC102009563 NW_004955403 20142634 20146416 - 102009563 AGCD01002154;XR_259188 MODEL 9026467 protein-coding LOC102009968 translation initiation factor IF-2-like NW_004955426 21666851 21667753 - 102009968 AGCD01026595;XM_005386266 XP_005386323 MODEL 8812029 pseudo LOC102013163 olfactory receptor 52B4-like NW_004955414 20049525 20050458 + 102013163 AGCD01015354 MODEL 8856898 protein-coding LOC102011976 lysozyme C-like NW_004955470 12811161 12816338 - 102011976 AGCD01052943;GBCC01001129;XM_005400814 XP_005400871 MODEL 8787743 protein-coding CUNH22orf39 chromosome unknown C22orf39 homolog INVOLVED IN negative regulation of long-term synaptic potentiation (ortholog); regulation of synaptic plasticity (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog); synaptic cleft (ortholog) NW_004955442 18570867 18575809 + 102008776 AGCD01038010;GBCB01112046;XM_005391778;XM_013517637 XP_005391835;XP_013373091 MODEL 39133460 misc_rna 7SK 7SK RNA 8856439 protein-coding Slc28a2 solute carrier family 28 member 2 ENCODES a protein that exhibits neurotransmitter transmembrane transporter activity (ortholog); nucleoside transmembrane transporter activity (ortholog); nucleoside:sodium symporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); inosine transport (ortholog); neurotransmitter transport (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN apicolateral plasma membrane (ortholog); brush border membrane (ortholog); coated vesicle (ortholog) NW_004955409 8145723 8175256 - 102022678 AGCD01009382;GBDK01394240;XM_005376738;XR_001232515 XP_005376795 MODEL 8705126 protein-coding Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lipase activator activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); phosphatidic acid biosynthetic process (ortholog); positive regulation of lipid catabolic process (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 1 (ortholog); cervical cancer (ortholog); Chanarin-Dorfman syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955420 27484500 27508360 - 102013938 AGCD01021454;GBDF01266672;XM_005383485 XP_005383542 MODEL 9016103 protein-coding Actrt1 actin related protein T1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); regulation of smoothened signaling pathway (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955473 6849016 6850445 + 102016586 AGCD01054010;GBDF01120547;XM_005401271 XP_005401328 MODEL 8872202 protein-coding LOC102013915 cysteine-rich secretory protein 3-like NW_004955411 8193665 8203985 + 102013915 AGCD01011719;AGCD01011720;XM_005377928 XP_005377985 MODEL 39131986 rrna 5S_rRNA 5S ribosomal RNA 8808006 protein-coding LOC102006881 uncharacterized protein C2orf78-like NW_004955409 19070835 19072914 - 102006881 AGCD01009855;AGCD01009856;GBDF01127547;GBDF01127548;XM_005377161 XP_005377218 MODEL 9010191 protein-coding Igsf10 immunoglobulin superfamily member 10 INVOLVED IN ossification (ortholog); regulation of neuron migration (ortholog); tissue regeneration (ortholog); ASSOCIATED WITH autoimmune thyroiditis (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955448 2532973 2557650 - 102004340 AGCD01041283;GBDK01308425;XM_005393032;XM_005393033;XM_013518617 XP_005393089;XP_005393090;XP_013374071 MODEL 8893947 protein-coding Rbm15b RNA binding motif protein 15B ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); mRNA export from nucleus (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nuclear envelope (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955532 3080207 3082312 + 102017499 AGCD01070267;GBBH01230101;XM_005410316 XP_005410373 MODEL 8803864 protein-coding Asb8 ankyrin repeat and SOCS box containing 8 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955500 7021895 7051459 - 102026131 AGCD01063897;AGCD01063898;GBBH01218885;XM_005406639;XM_005406641;XM_005406643;XM_013505689;XM_013505690;XM_013505691;XM_013505692;XM_013505693;XM_013505694 XP_005406696;XP_005406698;XP_005406700;XP_013361143;XP_013361144;XP_013361145;XP_013361146;XP_013361147;XP_013361148 MODEL 8742760 protein-coding Dkc1 dyskerin pseudouridine synthase 1 ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); pseudouridine synthase activity (ortholog); RNA binding (ortholog); INVOLVED IN box H/ACA sno(s)RNA metabolic process (ortholog); enzyme-directed rRNA pseudouridine synthesis (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH anemia (ortholog); aplastic anemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); Cajal body (ortholog) NW_004955594 846997 857255 - 102006409 AGCD01076444;AGCD01076445;GBCE01187676;GBDJ01233070;XM_013509993 XP_013365447 MODEL 39134445 misc_rna 7SK 7SK RNA 8791076 protein-coding Ankh ANKH inorganic pyrophosphate transport regulator ENCODES a protein that exhibits ATP transmembrane transporter activity (ortholog); phosphate transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN ATP export (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosis (ortholog); arthritis (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955426 3992671 4130754 - 102009521 AGCD01026087;AGCD01026088;GBCE01004397;GBCE01004398;XM_005386126 XP_005386183 MODEL 8808046 protein-coding Akr7a2 aldo-keto reductase family 7 member A2 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); phenanthrene-9,10-epoxide hydrolase activity (ortholog); INVOLVED IN daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) NW_004955452 6844 13868 - 102009010 AGCD01043795;AGCD01043796;GBBH01000796;GBCE01006855;XM_013519552 XP_013375006 MODEL 9036095 protein-coding LOC102011568 olfactory receptor 1013-like NW_004955511 1833015 1833950 + 102011568 AGCD01066381;XM_005407979 XP_005408036 MODEL 9001904 ncrna LOC102022263 uncharacterized LOC102022263 NW_004955464 3566129 3568526 - 102022263 AGCD01049974;GBDF01017563;XR_001236671;XR_263194 MODEL 8871146 protein-coding Bid BH3 interacting domain death agonist ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); extrinsic apoptotic signaling pathway (ortholog); glial cell apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955454 5776656 5785500 - 102005665 AGCD01045187;AGCD01045188;GBCB01130016;GBDJ01272354;XM_013520182 XP_013375636 MODEL 9039057 protein-coding LOC102013566 uncharacterized LOC102013566 NW_004955448 17433598 17833238 + 102013566 AGCD01041719;AGCD01041720;AGCD01041721;AGCD01041722;AGCD01041723;AGCD01041724;AGCD01041725;AGCD01041726;GBDI01112397;XM_005393168;XM_013518622;XM_013518623;XR_001235774;XR_001235775;XR_001235776;XR_001235777;XR_001235778;XR_001235779 XP_005393225;XP_013374076;XP_013374077 MODEL 8870275 protein-coding Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 9759452 9793105 - 102007081 AGCD01044260;AGCD01044261;GBBH01208189;XM_005395015 XP_005395072 MODEL 153211030 protein-coding CASP8AP2 caspase 8 associated protein 2 8998058 protein-coding Cdh18 cadherin 18 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog) NW_004955426 7914692 8318339 - 102014692 AGCD01026207;AGCD01026208;AGCD01026209;AGCD01026210;AGCD01026211;AGCD01026212;AGCD01026213;AGCD01026214;AGCD01026215;AGCD01026216;GBBH01047132;XM_005386139;XM_005386140;XM_013515025;XM_013515026 XP_005386196;XP_005386197;XP_013370479;XP_013370480 MODEL 39132220 rrna 5S_rRNA 5S ribosomal RNA 8708381 pseudo LOC102010762 RNA-binding protein 3 pseudogene NW_004955403 33567014 33567530 + 102010762 AGCD01002457 MODEL 8864723 protein-coding Cct6b chaperonin containing TCP1 subunit 6B ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Burkitt lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN chaperonin-containing T-complex (ortholog) NW_004955481 9624132 9694041 - 102007551 AGCD01057104;AGCD01057105;AGCD01057106;AGCD01057107;AGCD01057108;AGCD01057109;AGCD01057110;AGCD01057111;GBCQ01058116;XM_005402850;XM_013503402 XP_005402907;XP_013358856 MODEL 8852591 protein-coding Lnpep leucyl and cystinyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); neuropeptide catabolic process (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; long term potentiation; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle membrane (ortholog); insulin-responsive compartment (ortholog) NW_004955418 15631703 15718711 - 102009282 AGCD01019109;AGCD01019110;AGCD01019111;GBBH01187295;XM_005382222 XP_005382279 MODEL 8726863 pseudo LOC102018153 protein phosphatase 1A pseudogene NW_004955405 7689040 7690265 - 102018153 AGCD01004721 MODEL 39134272 misc_rna 7SK 7SK RNA 8797223 protein-coding Trim71 tripartite motif containing 71 ENCODES a protein that exhibits miRNA binding (ortholog); translation repressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH congenital hydrocephalus (ortholog); congenital hydrocephalus 4 (ortholog); COVID-19 (ortholog); FOUND IN P-body (ortholog) NW_004955421 97130 174326 + 102026436 AGCD01021547;AGCD01021548;AGCD01021549;AGCD01021550;GBDF01285530;XM_013513644 XP_013369098 MODEL 8804085 protein-coding Prdm1 PR/SET domain 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN aorta development (ortholog); artery morphogenesis (ortholog); cardiac septum development (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); central nervous system lymphoma (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955411 31434503 31455995 + 102005015 AGCD01012273;GBDK01284038;XM_005377825;XM_005377826 XP_005377882;XP_005377883 MODEL 39134001 misc_rna 7SK 7SK RNA 8729195 protein-coding Adra1b adrenoceptor alpha 1B ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adult heart development (ortholog); behavioral response to cocaine (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH asthma (ortholog); Cardiomegaly (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); intercalated disc (ortholog); membrane (ortholog) NW_004955408 13883574 13937798 + 102020769 AGCD01008376;AGCD01008377;AGCD01008378;GBDK01070153;GBDK01070156;XM_013506606 XP_013362060 MODEL 8948003 pseudo LOC102007260 glutaredoxin-2, mitochondrial pseudogene NW_004955430 13298152 13298519 - 102007260 AGCD01029530 MODEL 8774127 protein-coding Bsx brain specific homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eating behavior (ortholog); locomotory behavior (ortholog); mammary gland involution (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955412 23796973 23801479 - 102019787 AGCD01013095;XM_005378374 XP_005378431 MODEL 8764154 ncrna LOC102004354 uncharacterized LOC102004354 NW_004955455 10577469 10586870 - 102004354 AGCD01045957;AGCD01045958;GBDJ01114127;XR_262852 MODEL 8918958 protein-coding Serpini1 serpin family I member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); ASSOCIATED WITH familial encephalopathy with neuroserpin inclusion bodies (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle lumen (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955448 16947375 16982114 + 102012485 AGCD01041705;AGCD01041706;AGCD01041707;GBBH01191602;XM_005393142;XM_013518652;XM_013518653 XP_005393199;XP_013374106;XP_013374107 MODEL 8931531 protein-coding Atp5mg ATP synthase membrane subunit g ENCODES a protein that exhibits proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955412 19555736 19563094 + 102009924 AGCD01012962;AGCD01012963;GBDF01009030;XM_005378241 XP_005378298 MODEL 9041808 protein-coding Eogt EGF domain specific O-linked N-acetylglucosamine transferase ENCODES a protein that exhibits protein O-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 4 (ortholog) NW_004955421 18845626 18879008 + 102013835 AGCD01022058;AGCD01022059;GBDJ01390366;XM_005383814;XM_005383815;XM_013513795 XP_005383871;XP_005383872;XP_013369249 MODEL 8920557 protein-coding Ffar1 free fatty acid receptor 1 ENCODES a protein that exhibits bioactive lipid receptor activity (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); insulin secretion (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 4626567 4627683 + 102018075 AGCD01051918;XM_005400050 XP_005400107 MODEL 8843691 protein-coding LOC102005787 olfactory receptor 147-like NW_004955412 25191307 25192245 + 102005787 AGCD01013140;XM_005378415 XP_005378472 MODEL 8792392 ncrna LOC102008437 uncharacterized LOC102008437 NW_004955501 6949506 6954792 - 102008437 AGCD01064202;GBDF01210166;XR_264256 MODEL 8953583 protein-coding Cep131 centrosomal protein 131 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN intraciliary transport (ortholog); intraciliary transport involved in cilium assembly (ortholog); intramanchette transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); centriolar satellite (ortholog); centriole (ortholog) NW_004955506 1783717 1809665 + 102010926 AGCD01065273;AGCD01065274;GBDF01090011;XM_005407297;XM_005407300;XM_005407301;XM_005407302 XP_005407354;XP_005407357;XP_005407358;XP_005407359 MODEL 8962160 protein-coding Apcdd1 APC down-regulated 1 ENCODES a protein that exhibits identical protein binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN astrocyte cell migration (ortholog); hair follicle development (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hypotrichosis 1 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955402 1932685 1947680 - 102019450 AGCD01000062;GBCE01118898;GBDI01187853;XM_005372586 XP_005372643 MODEL 39132221 rrna 5S_rRNA 5S ribosomal RNA 10181337 protein-coding LOC106150310 small nuclear ribonucleoprotein E-like NW_004955471 4831727 4832005 - 106150310 AGCD01053090;XM_013522872 XP_013378326 MODEL 8702344 protein-coding Rps23 ribosomal protein S23 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic stress granule assembly (ortholog); cytoplasmic translation (ortholog); maintenance of translational fidelity (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH autistic disorder (ortholog); brachycephaly, trichomegaly, and developmental delay (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955418 28106333 28108276 + 102011769 AGCD01019428;AY533228;GBDF01010421;NM_001282369 AAS59430;NP_001269298;P62298 PROVISIONAL 8972225 protein-coding LOC102008052 endogenous retrovirus group K member 21 Rec protein-like NW_004955405 858916 862820 + 102008052 AGCD01004588;GBDF01277735;XM_005374249 XP_005374306 MODEL 8772465 protein-coding Vwa3b von Willebrand factor A domain containing 3B ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 22 (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955470 4658088 4850277 + 102027837 AGCD01052734;AGCD01052735;AGCD01052736;AGCD01052737;AGCD01052738;AGCD01052739;GBDF01081475;XM_005400699;XM_005400700;XM_005400701;XM_005400703;XM_005400704;XM_005400705;XM_005400706;XM_005400707;XM_013522812 XP_005400756;XP_005400757;XP_005400758;XP_005400760;XP_005400761;XP_005400762;XP_005400763;XP_005400764;XP_013378266 MODEL 8885512 ncrna LOC102008818 uncharacterized LOC102008818 NW_004955407 17028813 17032767 - 102008818 AGCD01007235;GBCB01103543;XR_259562 MODEL 8788322 ncrna LOC102003977 uncharacterized LOC102003977 NW_004955492 6357508 6415069 - 102003977 AGCD01060766;GBCQ01139758;XR_264056;XR_264057 MODEL 8726546 protein-coding Rbm17 RNA binding motif protein 17 INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955421 22732757 22745926 + 102030537 AGCD01022147;AGCD01022148;GBDF01086381;XM_005383861 XP_005383918 MODEL 9033791 protein-coding LOC102009564 regulator of nonsense transcripts 3A-like NW_004956152 404 2615 - 102009564 AGCD01079146;GBDJ01132460;XM_005415172 XP_005415229 MODEL 8968885 protein-coding LOC102013165 vomeronasal type-1 receptor 90-like NW_004955414 15050578 15051507 - 102013165 AGCD01015173;XM_005380443 XP_005380500 MODEL 8807482 ncrna LOC102013917 uncharacterized LOC102013917 NW_004955466 8471679 8498163 + 102013917 AGCD01050989;AGCD01050990;GBDK01117754;XR_001236825;XR_263297 MODEL 39133545 misc_rna 7SK 7SK RNA 8850923 protein-coding Ffar3 free fatty acid receptor 3 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to fatty acid (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH essential hypertension (ortholog); urinary bladder cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955468 4627686 4634499 + 102018377 AGCD01051918;AGCD01051919;XM_005400051 XP_005400108 MODEL 8750352 protein-coding LOC102009970 olfactory receptor 5M10-like NW_004955511 1738489 1739436 + 102009970 AGCD01066378;XM_005407975 XP_005408032 MODEL 9016046 pseudo LOC102008438 CDC42 small effector protein 1 pseudogene NW_004955503 2028864 2063030 - 102008438 AGCD01064593;AGCD01064594 MODEL 8973961 protein-coding Abhd6 abhydrolase domain containing 6, acylglycerol lipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); long-term synaptic depression (ortholog); lysobisphosphatidic acid metabolic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955430 1809969 1861441 - 102010506 AGCD01029135;AGCD01029136;AGCD01029137;AGCD01029138;GBDF01013377;XM_005387302 XP_005387359 MODEL 39131987 rrna 5S_rRNA 5S ribosomal RNA 39134273 misc_rna 7SK 7SK RNA 8796536 protein-coding CUNH22orf46 chromosome unknown C22orf46 homolog NW_004955413 27176899 27184107 + 102023682 AGCD01014497;GBDF01003456;XM_005379366 XP_005379423 MODEL 9054681 protein-coding Snrnp48 small nuclear ribonucleoprotein U11/U12 subunit 48 ASSOCIATED WITH acute myeloid leukemia (ortholog); Carvajal syndrome (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog); U11/U12 snRNP (ortholog) NW_004955465 6339362 6353563 - 102027391 AGCD01050441;GBDJ01316518;XM_005398851 XP_005398908 MODEL 8765195 protein-coding Igsf11 immunoglobulin superfamily member 11 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); maintenance of protein location (ortholog); positive regulation of long-term synaptic potentiation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell-cell junction (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955427 18698774 18716669 - 102021994 AGCD01027348;GBDF01007359;GBDJ01318281;XM_013515231 XP_013370685 MODEL 8928554 protein-coding Cirsr corepressor of RBPJ and splicing regulator ENCODES a protein that exhibits histone deacetylase binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centrosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955449 960524 993720 + 102007066 AGCD01041778;AGCD01041779;AGCD01041780;GBDF01118227;XM_005393189 XP_005393246 MODEL 8993067 protein-coding Slc28a3 solute carrier family 28 member 3 ENCODES a protein that exhibits purine-specific nucleoside:sodium symporter activity (ortholog); pyrimidine- and adenosine-specific:sodium symporter activity (ortholog); uridine transmembrane transporter activity (ortholog); INVOLVED IN nucleoside transmembrane transport (ortholog); purine nucleoside transmembrane transport (ortholog); pyrimidine nucleoside transport (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN brush border membrane (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955432 2892594 2948196 + 102003169 AGCD01030621;GBBH01011350;XM_013516020;XM_013516021;XM_013516022 XP_013371474;XP_013371475;XP_013371476 MODEL 39131536 protein-coding DKK1 dickkopf WNT signaling pathway inhibitor 1 8827730 protein-coding Ankib1 ankyrin repeat and IBR domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955432 9220318 9358728 + 102028325 AGCD01030898;AGCD01030899;AGCD01030900;AGCD01030901;AGCD01030902;AGCD01030903;AGCD01030904;GBDF01081537;XM_005388006;XM_005388008;XM_005388009;XM_013515948 XP_005388063;XP_005388065;XP_005388066;XP_013371402 MODEL 8990541 protein-coding Akt1 AKT serine/threonine kinase 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic mitochondrial changes (ortholog); behavioral response to pain (ortholog); PARTICIPATES IN adenosine signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; ceramide signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute promyelocytic leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955538 3208711 3224386 - 102027569 AGCD01071153;GBBH01032910;GBDJ01137252;XM_005410844 XP_005410901 MODEL 8758661 protein-coding Cdh19 cadherin 19 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955402 50110907 50213882 - 102029135 AGCD01001249;AGCD01001250;AGCD01001251;AGCD01001252;AGCD01001253;AGCD01001254;AGCD01001255;GBBH01205183;XM_013511279 XP_013366733 MODEL 39134276 misc_rna 7SK 7SK RNA 8710348 protein-coding Plce1 phospholipase C epsilon 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); enzyme binding (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); epidermal growth factor receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); benign familial hematuria (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); plasma membrane (ortholog) NW_004955507 555570 825568 + 102004404 AGCD01065477;AGCD01065478;AGCD01065479;AGCD01065480;AGCD01065481;AGCD01065482;AGCD01065483;AGCD01065484;AGCD01065485;AGCD01065486;AGCD01065487;AGCD01065488;GBDK01321403;XM_005407528;XM_013506159;XM_013506160 XP_005407585;XP_013361613;XP_013361614 MODEL 8926591 protein-coding Adra1d adrenoceptor alpha 1D ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure (ortholog); neuron-glial cell signaling (ortholog); norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH acute myeloid leukemia (ortholog); diastolic heart failure (ortholog); polycystic ovary syndrome (ortholog) NW_004955415 15000257 15022712 - 102006451 AGCD01016321;AGCD01016322;GBDK01383489;XM_013512129 XP_013367583 MODEL 8795683 protein-coding Bik BCL2 interacting killer ENCODES a protein that exhibits BH domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); male gonad development (ortholog); positive regulation of protein-containing complex assembly (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); endomembrane system (ortholog); mitochondrial envelope (ortholog) NW_004955413 28277727 28294032 + 102015396 AGCD01014555;GBDK01226774;XM_005379433 XP_005379490 MODEL 8914152 pseudo LOC102013568 anaphase-promoting complex subunit 15 pseudogene NW_004955450 3337411 3337795 + 102013568 AGCD01042429 MODEL 8778323 protein-coding LOC102011979 protein unc-13 homolog B NW_004955472 869993 1019542 - 102011979 AGCD01053364;AGCD01053365;AGCD01053366;AGCD01053367;GBDF01156325;GBDK01081960;XM_013522964;XM_013522965;XM_013522966;XM_013522967 XP_013378418;XP_013378419;XP_013378420;XP_013378421 MODEL 8733024 protein-coding LOC102011570 olfactory receptor 10AG1-like NW_004955511 924080 925039 - 102011570 AGCD01066346;XM_005408218 XP_005408275 MODEL 8915033 protein-coding Asb9 ankyrin repeat and SOCS box containing 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); mitochondrion (ortholog) NW_004955519 2902802 2941358 + 102018964 AGCD01067945;AGCD01067946;GBDF01281643;XM_005409176;XM_005409177;XM_013506982 XP_005409233;XP_005409234;XP_013362436 MODEL 8752355 pseudo LOC102010765 protein FAM133B pseudogene NW_004955405 3393161 3394490 + 102010765 AGCD01004634 MODEL 8902202 protein-coding LOC102004721 UDP-N-acetylglucosamine transferase subunit ALG13 homolog NW_004955493 8103019 8104261 - 102004721 AGCD01061265;GBDF01238027;XM_005405313 XP_005405370 MODEL 8800725 protein-coding Cct7 chaperonin containing TCP1 subunit 7 ENCODES a protein that exhibits identical protein binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell body (ortholog); chaperonin-containing T-complex (ortholog); microtubule (ortholog) NW_004955424 12379222 12402161 - 102017251 AGCD01024604;GBBH01030873;XM_005385567 XP_005385624 MODEL 8890791 pseudo LOC102018158 nascent polypeptide-associated complex subunit alpha-like NW_004955455 10593876 10627433 + 102018158 AGCD01045958;AGCD01045959 MODEL 39134002 misc_rna 7SK 7SK RNA 8872017 ncrna LOC102004356 uncharacterized LOC102004356 NW_004955408 16637908 16665694 - 102004356 AGCD01008442;GBDF01308085;XR_259690 MODEL 8909809 protein-coding Prdm10 PR/SET domain 10 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Birt-Hogg-Dube syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 30855909 30929998 - 102020099 AGCD01013312;AGCD01013313;AGCD01013314;AGCD01013315;AGCD01013316;GBDF01162914;GBDK01038990;XM_013511217 XP_013366671 MODEL 8749578 pseudo LOC102006883 regulator of nonsense transcripts 2 pseudogene NW_004955463 5813626 5816741 + 102006883 AGCD01049644 MODEL 9037858 protein-coding LOC102022264 wiskott-Aldrich syndrome protein homolog 1-like NW_004955464 129260 133199 + 102022264 AGCD01049927;GBDF01178309;XM_005398768 XP_005398825 MODEL 8882041 protein-coding Casp9 caspase 9 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN response to auditory stimulus; apoptotic process (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN endometrial cancer pathway; intrinsic apoptotic pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN apoptosome (ortholog); caspase complex (ortholog); cytoplasm (ortholog) NW_004955527 2613691 2630217 + 102012799 AGCD01069457;GBDF01303502;XM_013507423 XP_013362877 MODEL 8733503 ncrna LOC102005792 uncharacterized LOC102005792 NW_004955414 5124870 5149552 - 102005792 AGCD01014888;XR_260153 MODEL 39132223 rrna 5S_rRNA 5S ribosomal RNA 9009892 protein-coding Rps24 ribosomal protein S24 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); erythrocyte homeostasis (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congenital hypoplastic anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955437 14435822 14442662 - 102019956 AGCD01034672;GBDF01007125;XM_005389895;XM_005389897;XM_005389898;XM_013516999;XM_013517000 XP_005389952;XP_005389954;XP_005389955;XP_013372453;XP_013372454 MODEL 8859465 protein-coding Btaf1 B-TFIID TATA-box binding protein associated factor 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); transcription coregulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955425 1239640 1350327 - 102014377 AGCD01025219;AGCD01025220;AGCD01025221;AGCD01025222;AGCD01025223;GBBH01149822;GBDK01319184;XM_013514876 XP_013370330 MODEL 8906960 protein-coding LOC102008062 keratin-associated protein 10-10-like NW_004955407 41537601 41546262 - 102008062 AGCD01007870;XM_013505443 XP_013360897 MODEL 9044312 protein-coding LOC102008819 glutathione S-transferase theta-4-like NW_004955455 8339972 8366449 - 102008819 AGCD01045887;AGCD01045888;GBBH01060604;XM_005396410;XM_005396411;XM_005396412;XM_013520443 XP_005396467;XP_005396468;XP_005396469;XP_013375897 MODEL 8786384 protein-coding Lnpk lunapark, ER junction formation factor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blood coagulation (ortholog); embryonic digit morphogenesis (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network membrane (ortholog) NW_004955403 20654961 20728173 + 102012266 AGCD01002171;GBDF01144184;XM_005373417;XM_005373418;XM_013512809;XM_013512812;XM_013512816;XM_013512822 XP_005373474;XP_005373475;XP_013368263;XP_013368266;XP_013368270;XP_013368276 MODEL 8704588 protein-coding Apcdd1l APC down-regulated 1 like ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955445 1025597 1070385 + 102020172 AGCD01039328;AGCD01039329;GBBH01147400;GBCE01148194;XM_013518260 XP_013373714 MODEL 8787567 protein-coding Vwa5a von Willebrand factor A domain containing 5A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955412 24850301 24874498 + 102003105 AGCD01013130;GBBH01115484;XM_005378408;XM_005378409 XP_005378465;XP_005378466 MODEL 8722860 protein-coding Atp5mj ATP synthase membrane subunit j ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955538 2654283 2658610 - 102018979 AGCD01071134;AGCD01071135;GBCQ01008230;XM_005410814;XM_005410815;XM_005410816 XP_005410871;XP_005410872;XP_005410873 MODEL 8721736 ncrna LOC102007261 uncharacterized LOC102007261 NW_004955431 18572768 18575376 - 102007261 AGCD01030431;XR_261488 MODEL 8930458 protein-coding Trim72 tripartite motif containing 72 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN muscle organ development (ortholog); muscle system process (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); sarcolemma (ortholog) NW_004955493 8074521 8091611 + 102004173 AGCD01061260;AGCD01061261;AGCD01061262;AGCD01061263;GBCB01006024;XM_005405311;XM_005405312 XP_005405368;XP_005405369 MODEL 8762905 ncrna LOC102013168 uncharacterized LOC102013168 NW_004955415 32943857 32949925 - 102013168 AGCD01016743;GBDF01193091;XR_260338 MODEL 8980221 protein-coding Igsf21 immunoglobin superfamily member 21 INVOLVED IN synapse maturation (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); inhibitory synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955527 773340 994679 - 102020371 AGCD01069387;GBCQ01162091;GBDF01111574;XM_005409806 XP_005409863 MODEL 8788903 protein-coding Cep135 centrosomal protein 135 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN centriole replication (ortholog); centriole-centriole cohesion (ortholog); positive regulation of establishment of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955447 14934334 15004077 - 102029021 AGCD01041027;AGCD01041028;AGCD01041029;GBBH01137494;GBBH01182158;XM_013518555;XM_013518556;XM_013518557;XM_013518558;XM_013518559 XP_013374009;XP_013374010;XP_013374011;XP_013374012;XP_013374013 MODEL 39133580 misc_rna 7SK 7SK RNA 9030768 protein-coding Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ENCODES a protein that exhibits RNA binding (ortholog); U1 snRNA binding (ortholog); U1 snRNP binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN lysosomal lumen (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955559 1618246 1634144 - 102024057 AGCD01073654;GBDF01045469;XM_005412908;XM_005412911 XP_005412965;XP_005412968 MODEL 10315952 ncrna LOC106150311 uncharacterized LOC106150311 NW_004955471 6543221 6555015 - 106150311 AGCD01053127;GBDF01068368;XR_001237045 MODEL 8716137 protein-coding LOC102009565 phosphoinositide-3-kinase-interacting protein 1-like NW_004957624 10 1097 - 102009565 AGCD01081020;GBDJ01181150;GBDK01091793;XM_005415233 XP_005415290 MODEL 9049118 protein-coding LOC102009973 olfactory receptor 10AG1-like NW_004955511 872782 873738 - 102009973 AGCD01066345;XM_005408215 XP_005408272 MODEL 9011051 pseudo LOC102011574 polyadenylate-binding protein 1 pseudogene NW_004955516 4984024 4988135 + 102011574 AGCD01067543 MODEL 8773776 protein-coding Ffar4 free fatty acid receptor 4 ENCODES a protein that exhibits arrestin family protein binding (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cilium (ortholog); endocytic vesicle (ortholog); endosome membrane (ortholog) NW_004955507 81910 110047 + 102028663 AGCD01065461;AGCD01065462;GBDK01117139;XM_005407515 XP_005407572 MODEL 8874215 protein-coding Actrt2 actin related protein T2 ASSOCIATED WITH Keloid (ortholog); FOUND IN perinuclear theca (ortholog) NW_004955486 8465523 8466841 - 102030637 AGCD01059151;GBDF01008181;XM_005404155 XP_005404212 MODEL 39131988 rrna 5S_rRNA 5S ribosomal RNA 39134274 misc_rna 7SK 7SK RNA 8725840 protein-coding Serpini2 serpin family I member 2 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955448 16679885 16694484 - 102027247 AGCD01041701;GBBH01104730;XM_005393166 XP_005393223 MODEL 8932746 protein-coding Adra2a adrenoceptor alpha 2A ENCODES a protein that exhibits adrenergic receptor activity (ortholog); alpha-1B adrenergic receptor binding (ortholog); alpha-2C adrenergic receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); dopaminergic synapse (ortholog) NW_004955485 384405 387332 - 102011547 AGCD01058445;AGCD01058446;GBDI01262926;XM_013504020 XP_013359474 MODEL 8892681 protein-coding Abhd8 abhydrolase domain containing 8 INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog) NW_004955524 924128 932046 + 102027448 AGCD01068727;AGCD01068728;AGCD01068729;GBBH01227340;GBDK01393506;XM_013507241 XP_013362695 MODEL 8768365 protein-coding Rbm18 RNA binding motif protein 18 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955419 5800761 5822378 + 102009947 AGCD01019839;GBDF01122288;XM_005382536 XP_005382593 MODEL 8978326 protein-coding Cisd1 CDGSH iron sulfur domain 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); identical protein binding (ortholog); L-cysteine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN protein maturation (ortholog); regulation of cellular respiration (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955425 12009704 12020956 + 102008748 AGCD01025498;GBDF01002017;GBDI01061945;XM_013514872 XP_013370326 MODEL 9040989 protein-coding CUNH2orf42 chromosome unknown C2orf42 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955424 14932677 14975332 + 102008871 AGCD01024665;AGCD01024666;AGCD01024667;AGCD01024668;AGCD01024669;AGCD01024670;AGCD01024671;GBDF01005965;XM_005385627;XM_005385628;XM_005385629;XM_005385630;XM_013514642;XM_013514644 XP_005385684;XP_005385685;XP_005385686;XP_005385687;XP_013370096;XP_013370098 MODEL 9061175 protein-coding Akt1s1 AKT1 substrate 1 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell size (ortholog); negative regulation of TOR signaling (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); TORC1 complex (ortholog) NW_004955559 1055998 1063192 + 102028475 AGCD01073627;GBDF01308323;XM_005412818;XM_005412820;XM_005412821;XM_013508970;XM_013508971 XP_005412875;XP_005412877;XP_005412878;XP_013364424;XP_013364425 MODEL 39134277 misc_rna 7SK 7SK RNA 8719785 pseudo LOC102008440 high mobility group protein B1-like NW_004955427 3052920 3061332 - 102008440 AGCD01026912 MODEL 8878455 protein-coding Ankk1 ankyrin repeat and kinase domain containing 1 INVOLVED IN cellular response to retinoic acid (ortholog); regulation of cell cycle process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol-induced mental disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955412 15036071 15046118 + 102008708 AGCD01012865;GBBH01072256;XM_005378145;XM_013511262;XM_013511263 XP_005378202;XP_013366716;XP_013366717 MODEL 8939608 protein-coding Cdh2 cadherin 2 ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); brain morphogenesis (ortholog); calcium-dependent cell-cell adhesion (ortholog); PARTICIPATES IN cadherin mediated signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); agenesis of corpus callosum, cardiac, ocular, and genital syndrome (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apical plasma membrane (ortholog) NW_004955402 15829895 16049874 - 102016116 AGCD01000465;AGCD01000466;AGCD01000467;AGCD01000468;GBCC01009639;GBDF01153440;XM_005372737 XP_005372794 MODEL 8873501 protein-coding LOC102003981 cytochrome P450 4F6-like NW_004955495 7714402 7725532 - 102003981 AGCD01062160;GBDF01159203;XM_005406063;XM_013505320;XM_013505321 XP_005406120;XP_013360774;XP_013360775 MODEL 8807441 protein-coding LOC102011983 cystatin-9-like NW_004955415 30490600 30492806 - 102011983 AGCD01016664;GBDF01134641;XM_013512168 XP_013367622 MODEL 8985981 protein-coding Ascc1 activating signal cointegrator 1 complex subunit 1 INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); Bone Fractures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN DNA repair complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955437 19381279 19487057 + 102030123 AGCD01034847;AGCD01034848;AGCD01034849;AGCD01034850;AGCD01034851;AGCD01034852;AGCD01034853;AGCD01034854;AGCD01034855;GBDF01002453;XM_005390016;XM_013516956;XM_013516958 XP_005390073;XP_013372410;XP_013372412 MODEL 9066218 pseudo LOC102010772 protein FRG1 pseudogene NW_004955407 27229926 27230701 - 102010772 AGCD01007548 MODEL 8774922 protein-coding LOC102004723 maltase-glucoamylase, intestinal NW_004955494 1407172 1645558 - 102004723 AGCD01061397;AGCD01061398;AGCD01061399;AGCD01061400;AGCD01061401;AGCD01061402;AGCD01061403;AGCD01061404;AGCD01061405;AGCD01061406;AGCD01061407;AGCD01061408;AGCD01061409;AGCD01061410;AGCD01061411;AGCD01061412;AGCD01061413;AGCD01061414;AGCD01061415;AGCD01061416;AGCD01061417;AGCD01061418;AGCD01061419;GBCQ01114150;GBDK01228223;XM_013505005 XP_013360459 MODEL 39134003 misc_rna 7SK 7SK RNA 8737316 protein-coding LOC102013918 interferon lambda-3 NW_004955468 290537 294752 - 102013918 AGCD01051687;AGCD01051688;XM_013522286 XP_013377740 MODEL 9005279 protein-coding Plcg1 phospholipase C gamma 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); glutamate receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); calcium-mediated signaling (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN cell-cell junction (ortholog); clathrin-coated vesicle (ortholog); COP9 signalosome (ortholog) NW_004955445 15787496 15823859 - 102004432 AGCD01039855;AGCD01039856;GBCE01077323;GBDF01085611;XM_005392520 XP_005392577 MODEL 8712490 pseudo LOC102004357 transcription elongation factor SPT4-A-like NW_004955457 12370358 12370718 + 102004357 AGCD01047009 MODEL 8966970 protein-coding Prdm11 PR/SET domain 11 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955422 2616410 2655381 - 102021354 AGCD01022487;AGCD01022488;GBCE01108537;XM_005384073 XP_005384130 MODEL 8830862 protein-coding Eola1 endothelium and lymphocyte associated ASCH domain 1 INVOLVED IN regulation of gene expression (ortholog); regulation of interleukin-6 production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955498 1911103 1916645 + 102021893 AGCD01062753;GBDJ01129367;XM_005406399 XP_005406456 MODEL 8883291 protein-coding LOC102022265 uncharacterized LOC102022265 NW_004955411 32126496 32186689 - 102022265 AGCD01012294;GBDF01163027;XM_005377941 XP_005377998 MODEL 9048215 protein-coding Cct8 chaperonin containing TCP1 subunit 8 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) NW_004955407 28414583 28427964 - 102025540 AGCD01007586;GBCQ01033352;XM_005375612;XM_005375613 XP_005375669;XP_005375670 MODEL 8984852 protein-coding Dkk1 dickkopf WNT signaling pathway inhibitor 1 ENCODES a protein that exhibits co-receptor binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); receptor antagonist activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); endoderm development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH anodontia (ortholog); Bone Fractures (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955425 7353964 7357599 + 102017585 AGCD01025383;AGCD01025384;GBDK01196696;XM_013514768 XP_013370222 MODEL 8777516 protein-coding Bin1 bridging integrator 1 ENCODES a protein that exhibits actin filament binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); GTPase binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); enucleation (ortholog); lipid tube assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autosomal recessive centronuclear myopathy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) NW_004955459 3376149 3423157 + 102006639 AGCD01048015;GBDI01010869;XM_005397618;XM_005397619;XM_005397620;XM_005397621;XM_005397622;XM_005397623;XM_005397624;XM_005397625;XM_005397626;XM_005397627;XM_005397628;XM_005397629;XM_005397630;XM_005397631;XM_005397632;XM_005397633;XM_005397634;XM_013521077 XP_005397675;XP_005397676;XP_005397677;XP_005397678;XP_005397679;XP_005397680;XP_005397681;XP_005397682;XP_005397683;XP_005397684;XP_005397685;XP_005397686;XP_005397687;XP_005397688;XP_005397689;XP_005397690;XP_005397691;XP_013376531 MODEL 8707975 protein-coding Casq1 calsequestrin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); positive regulation of release of sequestered calcium ion into cytosol (ortholog); protein polymerization (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); I band (ortholog); junctional sarcoplasmic reticulum membrane (ortholog) NW_004955468 11967678 11978836 + 102014657 AGCD01052140;GBDF01026889;XM_005400195 XP_005400252 MODEL 8983946 protein-coding LOC102013569 late cornified envelope protein 1C NW_004955592 613174 614854 - 102013569 AGCD01076320;GBDI01027737;XM_005414621 XP_005414678 MODEL 39133582 misc_rna 7SK 7SK RNA 8820249 ncrna LOC102006884 uncharacterized LOC102006884 NW_004955464 10682579 10683956 - 102006884 AGCD01050127;GBCE01067008;XR_001236703;XR_001236704 MODEL 8984576 protein-coding LOC102009569 protocadherin-8 NW_004955404 50763263 50767330 + 102009569 AGCD01004536;AGCD01004537;GBDF01044218;XM_005374213;XM_013516742 XP_005374270;XP_013372196 MODEL 9035468 protein-coding Slc29a1 solute carrier family 29 member 1 (Augustine blood group) ENCODES a protein that exhibits adenine transmembrane transporter activity (ortholog); cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); INVOLVED IN adenine transport (ortholog); adenosine transport (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alcohol Withdrawal Seizures (ortholog); Animal Disease Models (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955437 9850279 9862412 + 102018977 AGCD01034547;AGCD01034548;GBCE01034310;XM_005389803;XM_005389804;XM_005389805;XM_005389807 XP_005389860;XP_005389861;XP_005389862;XP_005389864 MODEL 8724002 protein-coding Btbd1 BTB domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Delayed Emergence from Anesthesia (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955416 13621343 13657276 + 102011986 AGCD01017229;GBDF01004869;XM_013512487 XP_013367941 MODEL 9031049 ncrna LOC102008064 uncharacterized LOC102008064 NW_004955408 4366570 4372625 + 102008064 AGCD01008109;GBDF01296436;XR_001231915;XR_001231916;XR_001231917;XR_001231918;XR_259659 MODEL 8813800 protein-coding Rps25 ribosomal protein S25 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); ribosomal small subunit assembly (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955412 20126769 20129071 - 102021222 AGCD01012994;GBDF01002544;XM_005378285 XP_005378342 MODEL 8855293 protein-coding Fga fibrinogen alpha chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); structural molecule activity (ortholog); INVOLVED IN acute-phase response (ortholog); blood coagulation (ortholog); blood coagulation, common pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8806964 8814671 + 102008617 AGCD01053195;GBDF01130962;XM_005400932 XP_005400989 MODEL 8863839 ncrna LOC102007263 uncharacterized LOC102007263 NW_004955432 19290564 19338278 + 102007263 AGCD01031177;AGCD01031178;GBBH01148299;XR_001234678;XR_261536 MODEL 9008797 pseudo LOC102013170 clusterin-associated protein 1 pseudogene NW_004955477 8594751 8596230 - 102013170 AGCD01055648 MODEL 8980382 protein-coding Igsf22 immunoglobulin superfamily member 22 NW_004955414 33364637 33378363 - 102023687 AGCD01015805;GBDF01144543;XM_013511745 XP_013367199 MODEL 8940065 ncrna LOC102005793 uncharacterized LOC102005793 NW_004955470 11386077 11391036 - 102005793 AGCD01052887;GBDF01224584;XR_001237001;XR_263503 MODEL 8992611 protein-coding Vwa5b1 von Willebrand factor A domain containing 5B1 ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lymphoma (ortholog) NW_004955452 874819 938134 + 102018677 AGCD01043828;GBDK01400521;XM_005394679;XM_013519734;XM_013519735 XP_005394736;XP_013375188;XP_013375189 MODEL 9053801 protein-coding Cep15 centrosomal protein 15 ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955517 3475345 3489911 - 102025715 AGCD01067651;GBCQ01139343;GBDI01337888;XM_005409045 XP_005409102 MODEL 9008756 ncrna LOC102009976 uncharacterized LOC102009976 NW_004955515 4423696 4427822 - 102009976 AGCD01067320;GBDF01279453;XR_001231800;XR_001231801;XR_001231802;XR_001231803 MODEL 39132225 rrna 5S_rRNA 5S ribosomal RNA 8794011 ncrna LOC102011575 uncharacterized LOC102011575 NW_004955433 7112388 7165573 + 102011575 AGCD01031565;AGCD01031566;GBDF01115735;XR_001234705;XR_261564 MODEL 10095887 protein-coding LOC102008821 uncharacterized LOC102008821 NW_004955455 6620069 6624760 + 102008821 AGCD01045802;XM_013520311 XP_013375765 MODEL 8766192 protein-coding Atp5mk ATP synthase membrane subunit k ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 6 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955485 7152421 7159211 + 102005938 AGCD01058637;AGCD01058638;GBDJ01025859;XM_005403807;XM_005403808;XM_005403809 XP_005403864;XP_005403865;XP_005403866 MODEL 39131990 rrna 5S_rRNA 5S ribosomal RNA 39134275 misc_rna 7SK 7SK RNA 9029927 protein-coding Actrt3 actin related protein T3 ASSOCIATED WITH acute myeloid leukemia (ortholog); urinary bladder cancer (ortholog); FOUND IN male germ cell nucleus (ortholog); perinuclear theca (ortholog) NW_004955420 28183 30207 - 102012326 AGCD01020530;GBCQ01187131;XM_005382947 XP_005383004 MODEL 8989147 protein-coding Lnx1 ligand of numb-protein X 1 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN synapse maturation (ortholog); ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955447 17154026 17265067 + 102010749 AGCD01041114;AGCD01041115;AGCD01041116;GBBH01019203;XM_005392901;XM_005392902;XM_005392903;XM_013518520 XP_005392958;XP_005392959;XP_005392960;XP_013373974 MODEL 9052250 protein-coding Rbm19 RNA binding motif protein 19 INVOLVED IN positive regulation of embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955482 9930237 10032597 - 102019807 AGCD01057586;AGCD01057587;GBDI01262719;XM_005403230;XM_013503702 XP_005403287;XP_013359156 MODEL 8981012 protein-coding Btbd10 BTB domain containing 10 INVOLVED IN positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955414 28748835 28809735 - 102017326 AGCD01015685;AGCD01015686;AGCD01015687;AGCD01015688;GBDJ01314884;XM_005380310;XM_005380311;XM_005380313 XP_005380367;XP_005380368;XP_005380370 MODEL 9064728 protein-coding CUNH2orf66 chromosome unknown C2orf66 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); urinary bladder cancer (ortholog) NW_004955403 3600567 3604378 + 102017411 AGCD01001770;GBDI01226309;XM_005373272;XM_013512112 XP_005373329;XP_013367566 MODEL 8772561 pseudo LOC102008442 26S proteasome non-ATPase regulatory subunit 14 pseudogene NW_004955428 13615029 13616146 - 102008442 AGCD01027959 MODEL 8855937 protein-coding Snrpa small nuclear ribonucleoprotein polypeptide A ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); RNA binding (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); precatalytic spliceosome (ortholog); spliceosomal complex (ortholog) NW_004955578 579087 590010 - 102006181 AGCD01075489;GBCQ01041725;XM_005414022;XM_005414023 XP_005414079;XP_005414080 MODEL 39134278 misc_rna 7SK 7SK RNA 8974181 protein-coding Cdh20 cadherin 20 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); sarcoma (ortholog) NW_004955402 45340824 45543088 + 102018044 AGCD01001136;AGCD01001137;AGCD01001138;AGCD01001139;AGCD01001140;GBBH01157982;XM_005373010 XP_005373067 MODEL 8922714 protein-coding Ankle1 ankyrin repeat and LEM domain containing 1 ENCODES a protein that exhibits cobalt ion binding (ortholog); DNA endonuclease activity (ortholog); endonuclease activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); midbody (ortholog) NW_004955524 933200 936933 - 102027783 AGCD01068729;GBBH01173695;GBBH01210562;XM_005409673 XP_005409730 MODEL 9045982 pseudo LOC102011985 mitochondrial import inner membrane translocase subunit Tim8 B pseudogene NW_004955416 17979253 17979575 - 102011985 AGCD01017393 MODEL 10199379 ncrna LOC106150312 uncharacterized LOC106150312 NW_004955471 6810142 6811282 - 106150312 AGCD01053130;XR_001237046 MODEL 8773276 protein-coding LOC102018160 olfactory receptor 6C70-like NW_004955458 3167363 3168304 + 102018160 AGCD01047276;XM_013520812 XP_013376266 MODEL 8728101 protein-coding Apcs amyloid P component, serum ENCODES a protein that exhibits calcium ion binding (ortholog); complement component C1q complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); negative regulation of glycoprotein metabolic process (ortholog); ASSOCIATED WITH amyloidosis (ortholog); congestive heart failure (ortholog); coronary artery disease (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955468 11388154 11389259 + 102006894 AGCD01052129;GBDK01049342;XM_005400172 XP_005400229 MODEL 8756821 protein-coding Ascc2 activating signal cointegrator 1 complex subunit 2 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosolic ribosome (ortholog); DNA repair complex (ortholog); nuclear speck (ortholog) NW_004955455 4032357 4077900 - 102012058 AGCD01045664;AGCD01045665;AGCD01045666;GBDK01230854;XM_005396225;XM_013520428;XM_013520429;XM_013520430;XM_013520431 XP_005396282;XP_013375882;XP_013375883;XP_013375884;XP_013375885 MODEL 8738475 protein-coding LOC102010775 olfactory receptor 1468-like NW_004955408 1596483 1597001 + 102010775 AGCD01007966;GBDF01134956;XM_005376562 XP_005376619 MODEL 8912497 ncrna LOC102004725 uncharacterized LOC102004725 NW_004955423 3357252 3371703 + 102004725 AGCD01023511;GBDK01121190;XR_001234108;XR_260946 MODEL 8920897 protein-coding Sertad1 SERTA domain containing 1 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955578 848920 852193 + 102012705 AGCD01075500;GBDF01188769;XM_005414046;XM_013509664 XP_005414103;XP_013365118 MODEL 9055627 pseudo LOC102009574 40S ribosomal protein S12 pseudogene NW_004955406 11910786 11911430 - 102009574 AGCD01005898 MODEL 39134004 misc_rna 7SK 7SK RNA 8715118 protein-coding Abi1 abl interactor 1 ENCODES a protein that exhibits protein tyrosine kinase activator activity (ortholog); SH3 domain binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); lamellipodium morphogenesis (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell leading edge (ortholog); filopodium tip (ortholog); glutamatergic synapse (ortholog) NW_004955429 2682341 2783752 + 102028665 AGCD01028435;AGCD01028436;AGCD01028437;AGCD01028438;GBDF01119577;XM_005386876;XM_005386878;XM_005386879;XM_005386881;XM_005386882;XM_005386884;XM_005386885;XM_005386886;XM_005386888;XM_005386890;XM_005386891;XM_013515431;XM_013515432 XP_005386933;XP_005386935;XP_005386936;XP_005386938;XP_005386939;XP_005386941;XP_005386942;XP_005386943;XP_005386945;XP_005386947;XP_005386948;XP_013370885;XP_013370886 MODEL 8717299 protein-coding LOC102013922 uncharacterized LOC102013922 NW_004955470 5868613 5875570 + 102013922 AGCD01052761;GBDF01111358;XM_005400752;XM_005400753;XR_263472 XP_005400809;XP_005400810 MODEL 9038850 ncrna LOC102004359 uncharacterized LOC102004359 NW_004955409 13531193 13534835 + 102004359 AGCD01009612;GBDF01214064;XR_259783 MODEL 8710676 protein-coding Cisd2 CDGSH iron sulfur domain 2 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); regulation of autophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); type 2 diabetes mellitus (ortholog); Wolfram syndrome 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955496 5656686 5672888 - 102015646 AGCD01062355;AGCD01062356;GBCE01053957;XM_005406245 XP_005406302 MODEL 8990314 protein-coding Prdm12 PR/SET domain 12 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neurogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Congenital Pain Insensitivity (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog) NW_004955513 612566 627848 + 102021268 AGCD01066827;AGCD01066828;GBDF01167611;XM_005408635 XP_005408692 MODEL 8950268 protein-coding LOC102022268 protoheme IX farnesyltransferase, mitochondrial ENCODES a protein that exhibits geranylgeranyl diphosphate synthase activity (ortholog); protoheme IX farnesyltransferase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); copper ion homeostasis (ortholog); cytochrome complex assembly (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytochrome complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955467 3294200 3415778 - 102022268 AGCD01051332;GBDF01052173;XM_005399336 XP_005399393 MODEL 9046018 protein-coding Cct8l2 chaperonin containing TCP1 subunit 8 like 2 NW_004955491 6498532 6500957 + 102012766 AGCD01060534;GBDF01118259;XM_005404846 XP_005404903 MODEL 9018113 protein-coding Trim8 tripartite motif containing 8 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); host-mediated suppression of symbiont invasion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); epilepsy (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955485 7784625 7798131 - 102013832 AGCD01058676;AGCD01058677;AGCD01058678;GBBH01035373;GBDK01003830;XM_005403830 XP_005403887 MODEL 8973886 protein-coding Dkk2 dickkopf WNT signaling pathway inhibitor 2 ENCODES a protein that exhibits co-receptor binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955496 2489373 2578310 + 102006790 AGCD01062269;AGCD01062270;GBBH01218890;XM_005406215 XP_005406272 MODEL 8931245 protein-coding Bin2 bridging integrator 2 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); phagocytosis, engulfment (ortholog); plasma membrane tubulation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); phagocytic cup (ortholog); plasma membrane (ortholog) NW_004955547 1774330 1798031 - 102016523 AGCD01072246;GBDF01006942;GBDK01146360;XM_013508468 XP_013363922 MODEL 39133584 misc_rna 7SK 7SK RNA 8853723 protein-coding Akt2 AKT serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); molecular function activator activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to high light intensity (ortholog); cellular response to hormone stimulus (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN altered insulin responsive facilitative sugar transporter mediated glucose transport pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955578 950258 1004438 + 102017721 AGCD01075504;GBCB01001517;XM_005414067;XM_005414068;XM_005414069 XP_005414124;XP_005414125;XP_005414126 MODEL 8765741 ncrna LOC102013571 uncharacterized LOC102013571 NW_004955450 15353511 15354490 + 102013571 AGCD01042789;GBCQ01060641;XR_262557 MODEL 8768876 pseudo LOC102003982 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 pseudogene NW_004955423 23273272 23274390 + 102003982 AGCD01023999 MODEL 8798923 protein-coding Casq2 calsequestrin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sequestering activity (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to caffeine (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Bradycardia (ortholog); FOUND IN cytoplasm (ortholog); junctional membrane complex (ortholog); sarcoplasmic reticulum (ortholog) NW_004955435 18941975 18996027 - 102027564 AGCD01033415;AGCD01033416;AGCD01033417;GBCB01099901;XM_005389033 XP_005389090 MODEL 8767572 protein-coding Vwa5b2 von Willebrand factor A domain containing 5B2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955420 23243197 23253202 - 102029752 AGCD01021238;GBCQ01177082;GBCQ01177083;XM_013513358;XM_013513359 XP_013368812;XP_013368813 MODEL 8862672 protein-coding Cep152 centrosomal protein 152 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955409 5121332 5210729 + 102024096 AGCD01009308;AGCD01009309;AGCD01009310;GBDF01160944;GBDF01194486;XM_013510301;XM_013510302;XM_013510303;XM_013510304;XM_013510305 XP_013365755;XP_013365756;XP_013365757;XP_013365758;XP_013365759 MODEL 8877138 pseudo LOC102009977 inosine-5'-monophosphate dehydrogenase 2 pseudogene NW_004955516 3145206 3147423 - 102009977 AGCD01067484 MODEL 8991668 protein-coding Adra2b adrenoceptor alpha 2B ENCODES a protein that exhibits adrenergic receptor activity (ortholog); alpha2-adrenergic receptor activity (ortholog); epinephrine binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH Cognitive Dysfunction (ortholog); Cyanosis (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955470 3711075 3714450 - 102014443 AGCD01052708;AJ427271;GBCB01100329;XM_005400651;XM_005400652 CAD20309;XP_005400708;XP_005400709 MODEL 9013478 protein-coding Eomes eomesodermin ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); blastocyst development (ortholog); brain development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955430 19280460 19287060 - 102018517 AGCD01029712;GBDJ01152655;XM_005387507 XP_005387564 MODEL 8965296 protein-coding Slc29a2 solute carrier family 29 member 2 ENCODES a protein that exhibits adenine transmembrane transporter activity (ortholog); cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); INVOLVED IN adenine transport (ortholog); adenosine transport (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955422 18960862 18970312 + 102012443 AGCD01022969;GBBH01177502;XM_005384407 XP_005384464 MODEL 9068179 protein-coding Btbd16 BTB domain containing 16 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955477 560095 627017 + 102019167 AGCD01055492;GBDF01047392;XM_005401934;XM_013503026;XM_013503027 XP_005401991;XP_013358480;XP_013358481 MODEL 8709179 protein-coding Plcg2 phospholipase C gamma 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); phosphorylation-dependent protein binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN antifungal innate immune response (ortholog); B cell activation (ortholog); B cell differentiation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intracellular vesicle (ortholog) NW_004955522 4352890 4480735 + 102007928 AGCD01068416;AGCD01068417;AGCD01068418;AGCD01068419;AGCD01068420;AGCD01068421;AGCD01068422;GBCE01092331;GBDJ01422643;XM_013507097 XP_013362551 MODEL 8733739 ncrna LOC102013171 uncharacterized LOC102013171 NW_004955481 5717841 5719119 - 102013171 AGCD01057001;XR_263783 MODEL 9021863 protein-coding LOC102005795 fibrous sheath-interacting protein 2-like NW_004955473 4588318 4648716 + 102005795 AGCD01053953;AGCD01053954;GBDF01110725;XM_005401232;XM_013523062;XM_013523063 XP_005401289;XP_013378516;XP_013378517 MODEL 8894783 ncrna LOC102018165 uncharacterized LOC102018165 NW_004955409 31850420 31855944 - 102018165 AGCD01010341;AGCD01010342;GBDF01146276;XR_259800 MODEL 9007485 protein-coding Cdh22 cadherin 22 INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955445 11084448 11151871 + 102029338 AGCD01039682;AGCD01039683;GBBH01087748;XM_005392577 XP_005392634 MODEL 39132226 rrna 5S_rRNA 5S ribosomal RNA 8849915 ncrna LOC102011577 uncharacterized LOC102011577 NW_004955521 1595235 1596832 - 102011577 AGCD01068190;GBDF01280804;XR_264603 MODEL 39131991 rrna 5S_rRNA 5S ribosomal RNA 39134136 misc_rna 7SK 7SK RNA 8700836 protein-coding Rps26 ribosomal protein S26 ENCODES a protein that exhibits mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of RNA splicing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH anemia (ortholog); congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955458 3632675 3634565 + 102028616 AGCD01047328;AY533229;GBCB01007464;GBDJ01017907;XM_005415267 AAS59431;XP_005415324 MODEL 8867857 protein-coding LOC102008067 stereocilin NW_004955409 27019957 27035448 + 102008067 AGCD01010205;GBDF01030323;XM_005376944;XM_005376945 XP_005377001;XP_005377002 MODEL 9027875 protein-coding Abi2 abl interactor 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell migration (ortholog); dendrite development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); epilepsy (ortholog); high grade glioma (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); cytoplasm (ortholog) NW_004955457 11451851 11562692 - 102023229 AGCD01046970;AGCD01046971;AGCD01046972;AGCD01046973;GBCB01057114;GBCQ01070270;XM_005397017;XM_005397018;XM_005397019;XM_005397020;XM_005397021;XM_005397022;XM_005397023;XM_005397024;XM_005397025;XM_005397028;XM_005397029;XM_013520694 XP_005397074;XP_005397075;XP_005397076;XP_005397077;XP_005397078;XP_005397079;XP_005397080;XP_005397081;XP_005397082;XP_005397085;XP_005397086;XP_013376148 MODEL 8737975 protein-coding LOC102007264 ATP-binding cassette sub-family G member 2-like NW_004955433 399182 486055 - 102007264 AGCD01031317;AGCD01031318;AGCD01031319;AGCD01031320;AGCD01031321;AGCD01031322;AGCD01031323;AGCD01031324;GBDJ01086753;XM_005388159 XP_005388216 MODEL 8892214 protein-coding Rbm20 RNA binding motif protein 20 ENCODES a protein that exhibits pre-mRNA intronic binding (ortholog); RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN heart formation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); positive regulation of RNA splicing (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); asthma (ortholog); atrial fibrillation (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog) NW_004955485 590094 769604 - 102014785 AGCD01058456;AGCD01058457;GBCB01023246;XM_005403751;XM_005403752;XM_005403753;XM_013504116 XP_005403808;XP_005403809;XP_005403810;XP_013359570 MODEL 8905476 protein-coding Igsf3 immunoglobulin superfamily member 3 INVOLVED IN axonogenesis (ortholog); cell differentiation (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal atresia (ortholog); FOUND IN axon terminus (ortholog); membrane (ortholog) NW_004955435 19703952 19796065 - 102003688 AGCD01033436;AGCD01033437;GBCE01077748;GBDJ01317924;XM_005389042 XP_005389099 MODEL 39134279 misc_rna 7SK 7SK RNA 8799017 protein-coding LOC102006887 putative olfactory receptor 2W6 NW_004955465 13466321 13483771 + 102006887 AGCD01050609;AGCD01050610;AGCD01050611;GBDF01209454;XM_005399013;XM_013521796 XP_005399070;XP_013377250 MODEL 9006661 protein-coding Ascc3 activating signal cointegrator 1 complex subunit 3 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN DNA alkylation repair (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Autosomal Recessive Intellectual Developmental Disorder 81 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); DNA repair complex (ortholog) NW_004955411 26305103 26599375 - 102026727 AGCD01012178;AGCD01012179;AGCD01012180;GBCB01058124;XM_005377812;XM_005377813;XM_005377814 XP_005377869;XP_005377870;XP_005377871 MODEL 8833858 protein-coding Acvr1 activin A receptor type 1 ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type I (ortholog); ATP binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); acute inflammatory response (ortholog); atrial septum primum morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); bicuspid aortic valve disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN activin receptor complex (ortholog); apical part of cell (ortholog); plasma membrane (ortholog) NW_004955449 15587958 15706432 + 102013986 AGCD01042198;AGCD01042199;GBCE01051925;XM_005393398;XM_005393399;XM_005393403;XM_005393405;XM_013518776;XM_013518777;XM_013518778;XM_013518779;XM_013518780 XP_005393455;XP_005393456;XP_005393460;XP_005393462;XP_013374230;XP_013374231;XP_013374232;XP_013374233;XP_013374234 MODEL 9043445 protein-coding CUNH2orf68 chromosome unknown C2orf68 homolog NW_004955424 1895757 1897797 + 102026763 AGCD01024249;GBDF01155585;XM_005385419 XP_005385476 MODEL 39133586 misc_rna 7SK 7SK RNA 8818003 pseudo LOC102011989 F-actin-capping protein subunit alpha-1 pseudogene NW_004955481 9008939 9010077 - 102011989 AGCD01057092 MODEL 9043643 protein-coding Lnx2 ligand of numb-protein X 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955497 6948329 6989455 - 102003984 AGCD01062651;GBCC01024593;XM_005406356 XP_005406413 MODEL 9005163 protein-coding Atp5pb ATP synthase peripheral stalk-membrane subunit b ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); substantia nigra development (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955435 14940502 14952423 + 102027334 AGCD01033258;GBDJ01003480;XM_005388950 XP_005389007 MODEL 8812902 protein-coding Ankle2 ankyrin repeat and LEM domain containing 2 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN central nervous system development (ortholog); mitotic nuclear membrane reassembly (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955482 322251 353918 + 102018600 AGCD01057169;AGCD01057170;AGCD01057171;GBCE01114610;GBCQ01058651;XM_005402948 XP_005403005 MODEL 8836832 protein-coding Fgb fibrinogen beta chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein-folding chaperone binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH blood coagulation disease (ortholog); cardiovascular system disease (ortholog); carotid artery disease (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8824901 8832836 - 102009374 AGCD01053196;GBCB01021502;XM_005400935 XP_005400992 MODEL 9023469 pseudo LOC102008823 UDP-glucuronosyltransferase 1-8 pseudogene NW_004955407 23170169 23171410 + 102008823 AGCD01007415 MODEL 8870338 pseudo LOC102010777 cyclin-dependent kinase 4 pseudogene NW_004955458 15031076 15032155 + 102010777 AGCD01047860 MODEL 9025720 protein-coding LOC102009577 keratin-associated protein 20-2-like NW_004955407 30220342 30220545 + 102009577 AGCD01007628;XM_005375648 XP_005375705 MODEL 8802218 protein-coding Cisd3 CDGSH iron sulfur domain 3 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); metal ion binding (ortholog); INVOLVED IN protein maturation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 13814679 13817334 + 102018248 AGCD01043506;GBDJ01073229;XM_005394278 XP_005394335 MODEL 8961756 protein-coding Sertad2 SERTA domain containing 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955424 19683745 19797889 + 102007134 AGCD01024833;AGCD01024834;AGCD01024835;AGCD01024836;AGCD01024837;GBDK01430460;XM_005385696;XM_005385698 XP_005385753;XP_005385755 MODEL 8720989 pseudo LOC102008445 proteasome assembly chaperone 1-like NW_004955431 13381828 13382937 - 102008445 AGCD01030304 MODEL 8730608 protein-coding LOC102004360 RB-associated KRAB zinc finger protein NW_004955460 10721784 10738710 - 102004360 AGCD01048602;GBDF01153023;XM_005397845;XM_005397846;XM_013521129;XM_013521131;XM_013521132 XP_005397902;XP_005397903;XP_013376583;XP_013376585;XP_013376586 MODEL 8907376 protein-coding LOC102022273 antigen-presenting glycoprotein CD1d NW_004955468 9996455 9999630 + 102022273 AGCD01052065;GBDF01277360;XM_005400140 XP_005400197 MODEL 8998931 protein-coding Cep162 centrosomal protein 162 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN axonemal microtubule (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955411 11661767 11727210 - 102016992 AGCD01011830;GBDK01397515;XM_005377697;XM_013510870;XM_013510871;XM_013510872 XP_005377754;XP_013366324;XP_013366325;XP_013366326 MODEL 8920238 ncrna LOC102003985 uncharacterized LOC102003985 NW_004955424 19333276 19352042 + 102003985 AGCD01024815;AGCD01024816;GBDF01262654;XR_261082 MODEL 8717346 protein-coding Apeh acylaminoacyl-peptide hydrolase ENCODES a protein that exhibits identical protein binding (ortholog); omega peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955532 1580473 1590274 + 102015239 AGCD01070195;GBDF01119664;XM_005410206 XP_005410263 MODEL 8931736 protein-coding Akt3 AKT serine/threonine kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase C binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN brain morphogenesis (ortholog); cellular response to insulin stimulus (ortholog); homeostasis of number of cells within a tissue (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase-Akt signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); CNS neuroblastoma with FOXR2 activation (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955406 6907876 7163672 - 102027606 AGCD01005762;AGCD01005763;AGCD01005764;AGCD01005765;GBCE01188426;XM_005374758;XM_005374759;XM_005374760;XM_013520333 XP_005374815;XP_005374816;XP_005374817;XP_013375787 MODEL 9007012 pseudo LOC102009982 ADP-ribosylation factor-like protein 5A NW_004955435 20926678 20927274 - 102009982 AGCD01033467 MODEL 9043657 protein-coding LOC102004729 histone-lysine N-methyltransferase PRDM9 NW_004955499 553632 566756 + 102004729 AGCD01063239;AGCD01063240;GBCQ01046889;GBDF01224963;XM_013505574 XP_013361028 MODEL 9000862 protein-coding Snrpa1 small nuclear ribonucleoprotein polypeptide A' INVOLVED IN mRNA splicing, via spliceosome (ortholog); spermatogenesis (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); connective tissue disease (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear body (ortholog); nuclear speck (ortholog) NW_004955416 28166885 28178404 - 102010799 AGCD01017626;GBDJ01141602;XM_005381647 XP_005381704 MODEL 39134005 misc_rna 7SK 7SK RNA 8881358 protein-coding Trim9 tripartite motif containing 9 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); SNARE binding (ortholog); INVOLVED IN negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of dense core granule exocytosis (ortholog); negative regulation of SNARE complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendrite (ortholog) NW_004955409 11837717 11946718 + 102015811 AGCD01009529;AGCD01009530;GBDF01209690;XM_005376796;XM_005376797;XM_005376798;XM_005376799;XM_005376802;XM_013510331 XP_005376853;XP_005376854;XP_005376855;XP_005376856;XP_005376859;XP_013365785 MODEL 8731531 protein-coding Bin3 bridging integrator 3 INVOLVED IN intracellular protein localization (ortholog); myoblast migration involved in skeletal muscle regeneration (ortholog); regulation of lamellipodium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955403 46042885 46085029 - 102013997 AGCD01002849;GBDF01085029;XM_005373686 XP_005373743 MODEL 39134137 misc_rna 7SK 7SK RNA 8720614 protein-coding Prdm13 PR/SET domain 13 ENCODES a protein that exhibits chromatin binding (ortholog); histone methyltransferase activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN GABAergic neuron differentiation (ortholog); hypothalamus cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH CEREBELLAR DYSFUNCTION, IMPAIRED INTELLECTUAL DEVELOPMENT, AND HYPOGONADOTROPIC HYPOGONADISM (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) NW_004955411 25481601 25489049 + 102020641 AGCD01012160;AGCD01012161;GBDF01198351;XM_005377940 XP_005377997 MODEL 9046093 protein-coding Ep300 EP300 lysine acetyltransferase ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); acetyltransferase activity (ortholog); acyltransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); B cell differentiation (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); adrenocorticotropic hormone deficiency (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955413 26647553 26727875 + 102015395 AGCD01014465;AGCD01014466;AGCD01014467;GBBH01093312;GBDF01017704;XM_005379339 XP_005379396 MODEL 10279207 protein-coding LOC106150314 translation initiation factor IF-2-like NW_004955471 5044368 5044788 - 106150314 AGCD01053094;GBBH01058056;GBCE01106806;XM_013522881 XP_013378335 MODEL 8852583 protein-coding Btbd17 BTB domain containing 17 ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955553 1247702 1271777 - 102008771 AGCD01072873;AGCD01072874;AGCD01072875;AGCD01072876;GBCB01111017;XM_005412235;XM_013508637;XM_013508638 XP_005412292;XP_013364091;XP_013364092 MODEL 9059268 protein-coding Dkk3 dickkopf WNT signaling pathway inhibitor 3 INVOLVED IN adrenal gland development (ortholog); negative regulation of aldosterone biosynthetic process (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955414 27466636 27507186 - 102011436 AGCD01015663;GBDK01021738;XM_005380293;XM_013512053 XP_005380350;XP_013367507 MODEL 39134280 misc_rna 7SK 7SK RNA 8742218 protein-coding LOC102013574 probable helicase senataxin NW_004955807 9139 18072 - 102013574 AGCD01078384;AGCD01078385;GBDJ01014667;XM_013510197 XP_013365651 MODEL 8813586 protein-coding LOC102013178 olfactory receptor 4C46-like NW_004955422 151671 152600 + 102013178 AGCD01022395;XM_005383938 XP_005383995 MODEL 8834435 protein-coding Slc29a3 solute carrier family 29 member 3 ENCODES a protein that exhibits cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); cytidine transport (ortholog); guanine transmembrane transport (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955437 20072915 20108342 - 102007937 AGCD01034869;AGCD01034870;GBDK01324076;XM_005390038;XM_005390039 XP_005390095;XP_005390096 MODEL 9051765 protein-coding Vwa7 von Willebrand factor A domain containing 7 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955437 299554 308609 - 102004752 AGCD01034117;AGCD01034118;GBBH01227762;GBDJ01390262;XM_013516802 XP_013372256 MODEL 8966427 ncrna LOC102005799 uncharacterized LOC102005799 NW_004955476 1188807 1194269 + 102005799 AGCD01055201;GBDK01109467;XR_263617 MODEL 8935194 protein-coding Casr calcium sensing receptor ENCODES a protein that exhibits amino acid binding (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); bile acid secretion (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; E-cadherin signaling pathway; G protein mediated signaling pathway via Galpha12/Galpha13 family; ASSOCIATED WITH Albuminuria (ortholog); atherosclerosis (ortholog); autosomal dominant hypocalcemia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955427 21486608 21574017 + 102008556 AGCD01027445;AGCD01027446;AGCD01027447;AGCD01027448;AGCD01027449;AGCD01027450;GBDI01089889;XM_005386506;XM_013515042 XP_005386563;XP_013370496 MODEL 39133588 misc_rna 7SK 7SK RNA 39132227 rrna 5S_rRNA 5S ribosomal RNA 8730818 protein-coding LOC102011991 olfactory receptor 5V1-like NW_004955418 30227847 30228797 + 102011991 AGCD01019507;XM_005382370 XP_005382427 MODEL 39131992 rrna 5S_rRNA 5S ribosomal RNA 8727959 protein-coding Rps27 ribosomal protein S27 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Diamond-Blackfan anemia 17 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955545 599762 601399 + 102026801 AGCD01071803;GBBH01002907;XM_005411466 XP_005411523 MODEL 8707916 protein-coding LOC102011579 pancreatic alpha-amylase NW_004955435 7974418 8023066 + 102011579 AGCD01032983;AGCD01032984;AGCD01032985;AGCD01032986;AGCD01032987;AGCD01032988;AGCD01032989;GBDK01013521;XM_005388812;XM_013516505;XM_013516506 XP_005388869;XP_013371959;XP_013371960 MODEL 8868655 ncrna LOC102008072 uncharacterized LOC102008072 NW_004955410 28976836 28996818 + 102008072 AGCD01011267;AGCD01011268;GBDF01307217;XR_259880 MODEL 8834817 pseudo LOC102018166 serine-threonine kinase receptor-associated protein-like NW_004955409 35958599 35960059 + 102018166 AGCD01010437 MODEL 8951489 pseudo LOC102013930 uncharacterized LOC102013930 NW_004955415 31555747 31559936 + 102013930 AGCD01016683 MODEL 8739542 protein-coding Cish cytokine inducible SH2 containing protein INVOLVED IN cytokine-mediated signaling pathway (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-2 signaling pathway; interleukin-3 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Bacteremia (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955532 2380380 2386000 - 102014486 AGCD01070225;AGCD01070226;GBDF01280930;XM_005410305;XM_013507639 XP_005410362;XP_013363093 MODEL 8971374 protein-coding Igsf5 immunoglobulin superfamily member 5 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell surface (ortholog) NW_004955407 38468873 38510040 + 102027815 AGCD01007807;AGCD01007808;GBCQ01017451;XM_005375775;XM_005375776;XM_005375777;XM_005375778 XP_005375832;XP_005375833;XP_005375834;XP_005375835 MODEL 8923839 pseudo LOC102004361 rRNA-processing protein FCF1 homolog NW_004955409 37449725 37450930 + 102004361 AGCD01010519 MODEL 8750983 pseudo LOC102007272 non-histone chromosomal protein HMG-17 pseudogene NW_004955528 2647383 2647654 - 102007272 AGCD01069588 MODEL 8763308 protein-coding Ccz1 CCZ1 vacuolar protein trafficking and biogenesis associated ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN late endosome (ortholog); Mon1-Ccz1 complex (ortholog) NW_004955460 13842679 13867750 - 102026406 AGCD01048726;AGCD01048727;GBDF01193667;XM_005397906;XM_005397907;XM_013521164 XP_005397963;XP_005397964;XP_013376618 MODEL 9030372 pseudo LOC102006890 small ubiquitin-related modifier 2 pseudogene NW_004955412 9882267 9886715 + 102006890 AGCD01012749 MODEL 9051785 protein-coding Ascl1 achaete-scute family bHLH transcription factor 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal chromaffin cell differentiation (ortholog); carotid body glomus cell differentiation (ortholog); cell differentiation (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); high grade glioma (ortholog); Hyperplasia (ortholog); FOUND IN neuronal cell body (ortholog); nucleus (ortholog) NW_004955405 37941243 37943641 + 102006308 AGCD01005463;GBDI01387257;XM_005374573 XP_005374630 MODEL 10083655 protein-coding Adrb1 adrenoceptor beta 1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); amine binding (ortholog); beta1-adrenergic receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Anaphylaxis (ortholog); Angina Pectoris (ortholog); aortic valve stenosis (ortholog); FOUND IN early endosome (ortholog); membrane (ortholog); neuronal dense core vesicle (ortholog) NW_004955431 19025663 19027026 + 106148883 AGCD01030439;GBBH01188166;GBDI01054371;XM_013515887 XP_013371341 MODEL 8738284 protein-coding Cdh23 cadherin related 23 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transport (ortholog); cochlea development (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN apical part of cell (ortholog); centrosome (ortholog); cochlear hair cell ribbon synapse (ortholog) NW_004955437 19683792 20044718 - 102005634 AGCD01034865;AGCD01034866;AGCD01034867;GBDF01143876;GBDK01283597;XM_005390028;XM_005390029;XM_005390030;XM_013516827;XM_013516828;XM_013516829;XM_013516830 XP_005390085;XP_005390086;XP_005390087;XP_013372281;XP_013372282;XP_013372283;XP_013372284 MODEL 8738857 protein-coding LOC102004372 intelectin-1a NW_004955468 12649293 12708557 - 102004372 AGCD01052172;AGCD01052173;AGCD01052174;AGCD01052175;AGCD01052176;AGCD01052177;AGCD01052178;AGCD01052179;AGCD01052180;AGCD01052181;GBBH01135202;GBDF01177021;XM_013522493 XP_013377947 MODEL 9005781 protein-coding CUNH2orf69 chromosome unknown C2orf69 homolog INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); combined oxidative phosphorylation deficiency 53 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955403 1349489 1352541 - 102022772 AGCD01001717;GBCB01073853;XM_013511947 XP_013367401 MODEL 9009351 protein-coding LOC102002971 butyrophilin subfamily 1 member A1-like NW_004955581 1320018 1344045 + 102002971 AGCD01075730;GBBH01227542;XM_013509756;XM_013509757;XM_013509758;XM_013509759;XM_013509760;XM_013509761;XM_013509762;XR_001232489 XP_013365210;XP_013365211;XP_013365212;XP_013365213;XP_013365214;XP_013365215;XP_013365216 MODEL 8987028 protein-coding Ankmy1 ankyrin repeat and MYND domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955542 910258 943546 + 102016310 AGCD01071485;GBCE01072530;XM_005411157;XM_005411158;XM_005411159;XM_005411160;XM_005411161;XM_005411162;XM_005411163;XM_005411164;XM_005411165 XP_005411214;XP_005411215;XP_005411216;XP_005411217;XP_005411218;XP_005411219;XP_005411220;XP_005411221;XP_005411222 MODEL 8795535 pseudo LOC102010778 60S ribosomal protein L12-like NW_004955459 3652052 3652565 + 102010778 AGCD01048015 MODEL 8728731 pseudo LOC102004739 olfactory receptor 8J1-like NW_004955511 1437243 1438189 + 102004739 AGCD01066367 MODEL 39131538 protein-coding ABI3 ABI family member 3 8847913 protein-coding Atp5pd ATP synthase peripheral stalk subunit d ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to peptide (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); congenital hypothyroidism (ortholog); depressive disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955553 1893767 1897175 - 102018863 AGCD01072903;GBBH01000775;XM_005412268 XP_005412325 MODEL 9018754 protein-coding Sertad3 SERTA domain containing 3 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleus (ortholog) NW_004955578 837686 841561 + 102012380 AGCD01075499;GBDF01122108;XM_005414045 XP_005414102 MODEL 8813080 protein-coding Fgd1 FYVE, RhoGEF and PH domain containing 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); filopodium assembly (ortholog); ASSOCIATED WITH Aarskog syndrome (ortholog); acute myeloid leukemia (ortholog); amblyopia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955475 1703374 1752710 - 102022074 AGCD01054758;GBDI01024804;XM_013502823 XP_013358277 MODEL 8820351 ncrna LOC102008451 uncharacterized LOC102008451 NW_004955435 5691131 5736182 + 102008451 AGCD01032894;GBCQ01091899;XR_001234882 MODEL 8920778 protein-coding Acvr1b activin A receptor type 1B ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); cardiac fibroblast cell development (ortholog); development of primary female sexual characteristics (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); dextro-looped transposition of the great arteries (ortholog); FOUND IN activin receptor complex (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955547 2311573 2366106 + 102029799 AGCD01072268;AGCD01072269;AGCD01072270;AGCD01072271;AGCD01072272;AGCD01072273;AGCD01072274;GBDI01218066;XM_005411922;XM_005411923 XP_005411979;XP_005411980 MODEL 9010415 protein-coding Birc2 baculoviral IAP repeat containing 2 ENCODES a protein that exhibits FBXO family protein binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); necroptotic process (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN FasL mediated signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); bowenoid papulosis (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955412 5658322 5685628 + 102012516 AGCD01012645;AGCD01012646;AGCD01012647;AGCD01012648;GBCB01002048;GBDI01082457;XM_013511020 XP_013366474 MODEL 9027735 pseudo LOC102008826 creatine kinase U-type, mitochondrial-like NW_004955409 22945071 22950655 + 102008826 AGCD01010048 MODEL 8870892 protein-coding Aktip AKT interacting protein INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); FHF complex (ortholog); HOPS complex (ortholog) NW_004955433 11237717 11248638 - 102027004 AGCD01031649;GBDF01266347;XM_005388297;XM_005388298;XM_005388299;XM_005388300;XM_013516219;XM_013516220;XM_013516221 XP_005388354;XP_005388355;XP_005388356;XP_005388357;XP_013371673;XP_013371674;XP_013371675 MODEL 8872107 ncrna LOC102009985 uncharacterized LOC102009985 NW_004955532 2292201 2295717 + 102009985 AGCD01070223;GBDF01097912;XR_264728 MODEL 8762910 protein-coding Triml1 tripartite motif family like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Prostate Cancer (ortholog); lung cancer (ortholog) NW_004955403 21043233 21050261 - 102013678 AGCD01002179;GBDF01054116;XM_005373423;XM_005373424 XP_005373480;XP_005373481 MODEL 39134138 misc_rna 7SK 7SK RNA 8808246 protein-coding Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ENCODES a protein that exhibits histone pre-mRNA DCP binding (ortholog); RNA binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrocostomandibular syndrome (ortholog); Disease Progression (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955415 13522638 13530725 - 102015006 AGCD01016252;GBDI01021505;XM_005380752;XM_005380753;XM_005380754;XM_005380755 XP_005380809;XP_005380810;XP_005380811;XP_005380812 MODEL 8916684 protein-coding Plch1 phospholipase C eta 1 ENCODES a protein that exhibits lysophospholipase C activity (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol-mediated signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955448 6588885 6815087 - 102015257 AGCD01041393;GBDJ01114723;XM_005393067;XM_013518675;XM_013518676;XM_013518677 XP_005393124;XP_013374129;XP_013374130;XP_013374131 MODEL 9015695 protein-coding Apela apelin receptor early endogenous ligand ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); embryonic heart tube development (ortholog); ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN extracellular region (ortholog) NW_004955403 40257467 40266275 - 102013238 AGCD01002676;AGCD01002677;GBDI01055775;XM_013515250 XP_013370704 MODEL 9064460 protein-coding Rbm22 RNA binding motif protein 22 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); pre-mRNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); mRNA cis splicing, via spliceosome (ortholog); positive regulation of protein export from nucleus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955415 3895272 3905801 + 102013500 AGCD01015958;GBDF01084793;XM_005380568 XP_005380625 MODEL 8819169 protein-coding Cep164 centrosomal protein 164 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary transition fiber (ortholog) NW_004955412 18627023 18695685 + 102028173 AGCD01012945;GBDI01291763;XM_005378211;XM_005378212;XM_005378213;XM_005378215;XM_005378216;XM_005378217;XM_013511149;XM_013511151 XP_005378268;XP_005378269;XP_005378270;XP_005378272;XP_005378273;XP_005378274;XP_013366603;XP_013366605 MODEL 8936815 protein-coding Prdm14 PR/SET domain 14 ENCODES a protein that exhibits chromatin DNA binding (ortholog); histone methyltransferase binding (ortholog); methyltransferase regulator activity (ortholog); INVOLVED IN cell fate specification (ortholog); cell morphogenesis (ortholog); embryo implantation (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); lung cancer (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955444 9606310 9626772 + 102004335 AGCD01038974;AGCD01038975;AGCD01038976;GBDF01277783;XM_005392110 XP_005392167 MODEL 8707427 protein-coding Ep400 E1A binding protein p400 ENCODES a protein that exhibits chromatin binding (ortholog); protein antigen binding (ortholog); INVOLVED IN gene expression (ortholog); nervous system development (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955482 639316 746331 - 102022599 AGCD01057180;AGCD01057181;AGCD01057182;AGCD01057183;AGCD01057184;AGCD01057185;AGCD01057186;GBCQ01006240;XM_005402961;XM_013503598;XM_013503599;XM_013503600;XM_013503601;XM_013503602;XM_013503603;XM_013503604;XM_013503605;XM_013503606;XM_013503607;XM_013503608 XP_005403018;XP_013359052;XP_013359053;XP_013359054;XP_013359055;XP_013359056;XP_013359057;XP_013359058;XP_013359059;XP_013359060;XP_013359061;XP_013359062 MODEL 39134282 misc_rna 7SK 7SK RNA 8891615 protein-coding Dkkl1 dickkopf like acrosomal protein 1 INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of testosterone biosynthetic process (ortholog); penetration of zona pellucida (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955559 1445082 1449167 - 102018660 AGCD01073646;GBDF01002816;XM_005412889;XM_005412890 XP_005412946;XP_005412947 MODEL 9045257 protein-coding LOC102013576 janus kinase and microtubule-interacting protein 2-like NW_004956233 10107 11664 - 102013576 AGCD01079290;XM_005415183 XP_005415240 MODEL 8726572 pseudo LOC102003988 PEST proteolytic signal-containing nuclear protein pseudogene NW_004955505 1483191 1484367 + 102003988 AGCD01064974;XM_005407108 MODEL 8827143 protein-coding Cd101 CD101 molecule INVOLVED IN glucose metabolic process (ortholog); immune response (ortholog); myeloid cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955435 20104391 20145440 + 102005630 AGCD01033445;AGCD01033446;AGCD01033447;GBBH01131151;XM_005389048;XM_013516564 XP_005389105;XP_013372018 MODEL 8782723 ncrna LOC102006893 uncharacterized LOC102006893 NW_004955468 7026096 7045290 - 102006893 AGCD01051993;AGCD01051994;GBCE01020831;XR_001236952;XR_263395 MODEL 8862071 pseudo LOC102005801 ewing's tumor-associated antigen 1 pseudogene NW_004955476 28845 38954 + 102005801 AGCD01055190 MODEL 8989111 protein-coding Cass4 Cas scaffold protein family member 4 ENCODES a protein that exhibits protein tyrosine kinase binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog) NW_004955445 2771130 2809815 - 102009663 AGCD01039365;AGCD01039366;AGCD01039367;GBDK01232305;XM_005392268 XP_005392325 MODEL 39132229 rrna 5S_rRNA 5S ribosomal RNA 39133599 misc_rna 7SK 7SK RNA 10359836 protein-coding Btbd18 BTB domain containing 18 INVOLVED IN male meiosis I (ortholog); piRNA transcription (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) NW_004955511 2641848 2647679 - 106146243 AGCD01066422;XM_013506440 XP_013361894 MODEL 39131993 rrna 5S_rRNA 5S ribosomal RNA 39134006 misc_rna 7SK 7SK RNA 8705883 ncrna LOC102011583 uncharacterized LOC102011583 NW_004955436 8909255 8926076 + 102011583 AGCD01033752;AGCD01033753;AGCD01033754;GBDI01265317;XR_001234994;XR_261775;XR_261776 MODEL 8705786 pseudo LOC102008073 39S ribosomal protein L47, mitochondrial pseudogene NW_004955411 8554284 8555056 + 102008073 AGCD01011730 MODEL 8810062 ncrna LOC102018169 uncharacterized LOC102018169 NW_004955411 3795767 3797434 - 102018169 AGCD01011556;XR_259914 MODEL 10109534 ncrna LOC106150315 uncharacterized LOC106150315 NW_004955471 5014497 5024132 - 106150315 AGCD01053094;XR_001237048 MODEL 8765746 protein-coding LOC102013933 schlafen family member 12-like NW_004955481 9985188 10014736 + 102013933 AGCD01057130;AGCD01057131;AGCD01057132;GBBH01068824;XM_013503415;XM_013503416 XP_013358869;XP_013358870 MODEL 8731070 protein-coding Igsf6 immunoglobulin superfamily member 6 ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955493 1109910 1119806 - 102017349 AGCD01060878;GBDK01072125;XM_005405086 XP_005405143 MODEL 9031409 protein-coding LOC102022275 interleukin-36 beta-like NW_004955470 1241867 1252089 - 102022275 AGCD01052631;GBCC01021600;XM_005400589 XP_005400646 MODEL 8827240 pseudo LOC102013182 pre-mRNA-splicing factor SPF27 pseudogene NW_004955494 8279287 8279936 - 102013182 AGCD01061582 MODEL 8910084 protein-coding Vwa8 von Willebrand factor A domain containing 8 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955518 4351781 4723479 + 102028887 AGCD01067827;AGCD01067828;AGCD01067829;AGCD01067830;AGCD01067831;AGCD01067832;AGCD01067833;AGCD01067834;AGCD01067835;AGCD01067836;GBCB01043083;GBDI01292258;XM_013506956 XP_013362410 MODEL 8985997 protein-coding Adrb2 adrenoceptor beta 2 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); amyloid-beta binding (ortholog); B2 bradykinin receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); PARTICIPATES IN adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH acute kidney failure (ortholog); AIDS Dementia Complex (ortholog); Angina Pectoris (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); caveola (ortholog) NW_004955415 5515157 5517198 - 102003962 AGCD01015995;GBBH01126394;XM_005380632 XP_005380689 MODEL 9032840 protein-coding LOC102004375 olfactory receptor 51Q1-like NW_004955414 21317366 21326113 + 102004375 AGCD01015412;AGCD01015413;AGCD01015414;XM_005380083 XP_005380140 MODEL 8864885 ncrna LOC102011996 uncharacterized LOC102011996 NW_004955421 24720574 24725193 + 102011996 AGCD01022221;GBDI01347519;XR_260825 MODEL 8765418 pseudo LOC102002972 uncharacterized LOC102002972 NW_004955449 17868296 17939598 - 102002972 AGCD01042269;AGCD01042270;AGCD01042271;AGCD01042272;AGCD01042273;AGCD01042274;AGCD01042275 MODEL 9054750 protein-coding Slc29a4 solute carrier family 29 member 4 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); cellular detoxification (ortholog); dopamine uptake (ortholog); PARTICIPATES IN metformin pharmacokinetics pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955460 10155916 10181974 + 102029155 AGCD01048573;AGCD01048574;AGCD01048575;GBBH01180329;XM_005397838;XM_005397839;XM_013521136 XP_005397895;XP_005397896;XP_013376590 MODEL 9049982 protein-coding Ankmy2 ankyrin repeat and MYND domain containing 2 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955410 19778736 19812731 - 102021321 AGCD01011030;GBCC01042899;GBDK01280338;XM_013510568 XP_013366022 MODEL 8999491 protein-coding LOC102010781 proline-rich proteoglycan 2-like NW_004955463 13403383 13407571 + 102010781 AGCD01049866;GBDI01274687;XM_005398474 XP_005398531 MODEL 8869078 protein-coding Alad aminolevulinate dehydratase ENCODES a protein that exhibits identical protein binding (ortholog); lead ion binding (ortholog); porphobilinogen synthase activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lead ion (ortholog); heme A biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); ALAD-Deficiency Porphyria (ortholog); FOUND IN cytosol (ortholog) NW_004955419 14093010 14104376 + 102022295 AGCD01020012;GBCE01055436;XM_005382674;XM_005382675;XM_013513133;XM_013513134 XP_005382731;XP_005382732;XP_013368587;XP_013368588 MODEL 8884599 protein-coding LOC102004740 glycine N-acyltransferase-like protein Keg1 NW_004955511 3618873 3627363 - 102004740 AGCD01066468;GBCQ01042492;XM_005408043 XP_005408100 MODEL 9007832 protein-coding Abi3 ABI family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of lamellipodium assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) NW_004955451 12241084 12248857 - 102014000 AGCD01043379;AGCD01043380;GBDI01171609;XM_013519066 XP_013374520 MODEL 8923401 protein-coding Rps27a ribosomal protein S27a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955424 27823575 27825489 - 102011335 AGCD01025131;GBCQ01012188;XM_005385788 XP_005385845 MODEL 9003830 protein-coding LOC102009579 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase NW_004955456 8783121 8961174 + 102009579 AGCD01046502;AGCD01046503;AGCD01046504;GBDF01082105;XM_005396723;XM_013520568;XM_013520569;XM_013520570;XM_013520571 XP_005396780;XP_013376022;XP_013376023;XP_013376024;XP_013376025 MODEL 8843012 ncrna LOC102008453 uncharacterized LOC102008453 NW_004955436 8430136 8452234 + 102008453 AGCD01033741;AGCD01033742;GBDJ01154251;XR_261770 MODEL 8779337 protein-coding Acvr1c activin A receptor type 1C ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); apoptotic nuclear changes (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); retinal degeneration (ortholog); FOUND IN activin receptor complex (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955449 15814230 15864747 + 102016002 AGCD01042203;GBDI01023047;XM_005393407 XP_005393464 MODEL 8880742 protein-coding Sertad4 SERTA domain containing 4 ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955489 1947819 1958434 - 102019070 AGCD01059855;AGCD01059856;GBBH01121747;GBDJ01175985;XM_005404520 XP_005404577 MODEL 8802380 protein-coding Abi3bp ABI family member 3 binding protein ENCODES a protein that exhibits actin filament binding (ortholog); collagen binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); extracellular matrix organization (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN dendritic shaft (ortholog); dendritic spine (ortholog); extracellular matrix (ortholog) NW_004955427 2362403 2581970 - 102024481 AGCD01026897;AGCD01026898;AGCD01026899;GBDK01304717;XM_005386307;XM_005386313;XM_013515130;XM_013515131;XM_013515132;XM_013515133;XM_013515134;XM_013515135;XM_013515136;XM_013515137;XM_013515138;XM_013515139;XM_013515140;XM_013515141;XM_013515142;XM_013515143;XM_013515144;XM_013515145;XM_013515146;XM_013515147;XM_013515148;XM_013515149;XM_013515150;XM_013515151;XM_013515152;XM_013515153;XM_013515154;XM_013515155 XP_005386364;XP_005386370;XP_013370584;XP_013370585;XP_013370586;XP_013370587;XP_013370588;XP_013370589;XP_013370590;XP_013370591;XP_013370592;XP_013370593;XP_013370594;XP_013370595;XP_013370596;XP_013370597;XP_013370598;XP_013370599;XP_013370600;XP_013370601;XP_013370602;XP_013370603;XP_013370604;XP_013370605;XP_013370606;XP_013370607;XP_013370608;XP_013370609 MODEL 8839242 protein-coding CUNH2orf76 chromosome unknown C2orf76 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955459 10347766 10406189 + 102022890 AGCD01048186;AGCD01048187;AGCD01048188;GBBH01102075;GBDI01291657;XM_013521083;XM_013521084 XP_013376537;XP_013376538 MODEL 8994865 protein-coding LOC102007274 FMR1 neighbor-like NW_004955532 1194463 1194945 + 102007274 AGCD01070170;XM_013507573 XP_013363027 MODEL 8854546 protein-coding Cit citron rho-interacting serine/threonine kinase ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN dendrite development (ortholog); G2/M transition of mitotic cell cycle (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autosomal recessive primary microcephaly (ortholog); FOUND IN actin cytoskeleton (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955455 11705015 11871762 + 102015283 AGCD01046018;AGCD01046019;AGCD01046020;AGCD01046021;GBDF01248560;XM_005396520;XM_005396521;XM_005396522;XM_005396523;XM_013520469;XM_013520470;XM_013520471 XP_005396577;XP_005396578;XP_005396579;XP_005396580;XP_013375923;XP_013375924;XP_013375925 MODEL 8911676 protein-coding Dlat dihydrolipoamide S-acetyltransferase ENCODES a protein that exhibits acetyltransferase activity (ortholog); dihydrolipoyllysine-residue acetyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN pyruvate catabolic process (ortholog); pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH Athetosis (ortholog); brain disease (ortholog); cerebral palsy (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) NW_004955412 13718091 13746220 + 102026618 AGCD01012844;GBDF01122953;XM_005378107 XP_005378164 MODEL 9012523 protein-coding Birc3 baculoviral IAP repeat containing 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); transferase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); necroptotic process (ortholog); negative regulation of necroptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); bowenoid papulosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955412 5624865 5643520 + 102012174 AGCD01012644;GBDJ01123917;XM_005377975;XM_013511018;XM_013511019 XP_005378032;XP_013366472;XP_013366473 MODEL 8925343 ncrna LOC102003990 uncharacterized LOC102003990 NW_004955428 13288412 13293352 + 102003990 AGCD01027947;GBDF01181697;XR_001234443;XR_261302 MODEL 8989929 ncrna LOC102008827 uncharacterized LOC102008827 NW_004955410 29223762 29228888 - 102008827 AGCD01011276;GBDK01225118;XR_259882 MODEL 39134139 misc_rna 7SK 7SK RNA 8789404 protein-coding Atp5pf ATP synthase peripheral stalk subunit F6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN negative regulation of arachidonate secretion (ortholog); negative regulation of prostaglandin secretion (ortholog); positive regulation of blood pressure (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); essential hypertension (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); mitochondrion (ortholog) NW_004955407 25601253 25609933 - 102017843 AGCD01007512;GBDK01357064;XM_005375588;XM_005375589 XP_005375645;XP_005375646 MODEL 8782728 protein-coding Plch2 phospholipase C eta 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol metabolic process (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955486 8717799 8785144 - 102007236 AGCD01059155;AGCD01059156;GBBH01188538;XM_013504169;XM_013504170;XM_013504172;XM_013504173;XM_013504174 XP_013359623;XP_013359624;XP_013359626;XP_013359627;XP_013359628 MODEL 8888737 protein-coding Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ENCODES a protein that exhibits snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); connective tissue disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955415 25880013 25889295 + 102007758 AGCD01016587;GBDF01052661;XM_005380902 XP_005380959 MODEL 8769669 ncrna LOC102011584 uncharacterized LOC102011584 NW_004955436 18651414 18692957 + 102011584 AGCD01033976;AGCD01033977;AGCD01033978;GBDF01154303;XR_001234938;XR_001234939 MODEL 39134285 misc_rna 7SK 7SK RNA 8904511 protein-coding Ascl2 achaete-scute family bHLH transcription factor 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); chorionic trophoblast cell development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Colonic Neoplasms (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 14051140 14053521 - 102007908 AGCD01022847;GBBH01114854;XM_005384200;XM_013514320 XP_005384257;XP_013369774 MODEL 8907702 protein-coding LOC102013935 putative olfactory receptor 14L1 NW_004955418 30381369 30382328 + 102013935 AGCD01019515;XM_005382374 XP_005382431 MODEL 8879933 protein-coding LOC102022276 olfactory receptor 51L1-like NW_004955414 20630719 20632805 + 102022276 AGCD01015384;AGCD01015385;XM_013511722 XP_013367176 MODEL 8904678 protein-coding Cdh24 cadherin 24 ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog) NW_004955409 37249377 37257420 + 102020430 AGCD01010500;AGCD01010501;GBDF01308147;GBDF01308160;XM_013510445 XP_013365899 MODEL 8747534 protein-coding Cd109 CD109 molecule INVOLVED IN hair follicle development (ortholog); negative regulation of keratinocyte proliferation (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955488 9281407 9378354 - 102008423 AGCD01059755;AGCD01059756;AGCD01059757;AGCD01059758;AGCD01059759;AGCD01059760;AGCD01059761;AGCD01059762;AGCD01059763;AGCD01059764;AGCD01059765;GBDF01123507;GBDJ01129430;XM_013504426 XP_013359880 MODEL 9011031 protein-coding LOC102009987 trem-like transcript 4 protein NW_004955437 7799753 7806865 - 102009987 AGCD01034469;GBBH01047078;XM_005389681;XM_013517047;XM_013517048 XP_005389738;XP_013372501;XP_013372502 MODEL 9015108 protein-coding LOC102006896 apolipoprotein L2-like NW_004955413 22677705 22696823 + 102006896 AGCD01014312;AGCD01014313;GBBH01039748;XM_013511299 XP_013366753 MODEL 9039450 pseudo LOC102005802 60S ribosomal protein L37 pseudogene NW_004955416 8201222 8202250 - 102005802 AGCD01017037;XR_260372 MODEL 39132231 rrna 5S_rRNA 5S ribosomal RNA 39131994 rrna 5S_rRNA 5S ribosomal RNA 39134007 misc_rna 7SK 7SK RNA 8868661 protein-coding Btbd19 BTB domain containing 19 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955464 13401388 13416924 - 102008074 AGCD01050274;AGCD01050275;GBDJ01381390;XM_005398728;XM_005398729;XM_005398730;XM_013521629 XP_005398785;XP_005398786;XP_005398787;XP_013377083 MODEL 39133661 misc_rna 7SK 7SK RNA 8707995 protein-coding LOC102018173 protein SPT2 homolog NW_004955412 18553976 18555107 + 102018173 AGCD01012944;AGCD01012945;GBDF01021744;XM_013510975 XP_013366429 MODEL 8718756 protein-coding Fgd2 FYVE, RhoGEF and PH domain containing 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phosphate binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); nucleus (ortholog) NW_004955437 6026087 6038740 - 102021388 AGCD01034413;AGCD01034414;GBDK01184372;XM_005389626;XM_005389627;XM_005389628;XM_013516942;XM_013516943 XP_005389683;XP_005389684;XP_005389685;XP_013372396;XP_013372397 MODEL 8748612 protein-coding Cep170 centrosomal protein 170 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955406 6588504 6695246 - 102029148 AGCD01005755;AGCD01005756;GBDF01000468;XM_005374763;XM_005374769;XM_005374770;XM_013520258;XM_013520265;XM_013520267;XM_013520272;XM_013520283;XM_013520287;XM_013520296;XM_013520297;XM_013520302 XP_005374820;XP_005374826;XP_005374827;XP_013375712;XP_013375719;XP_013375721;XP_013375726;XP_013375737;XP_013375741;XP_013375750;XP_013375751;XP_013375756 MODEL 8792541 protein-coding Prdm15 PR/SET domain 15 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of MAPK cascade (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 39680757 39714917 + 102019668 AGCD01007834;GBDI01208301;XM_005375846;XM_013505249 XP_005375903;XP_013360703 MODEL 8856428 protein-coding Rbm23 RNA binding motif protein 23 INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955409 37384872 37392896 + 102021104 AGCD01010511;GBDF01306118;XM_013510245 XP_013365699 MODEL 8905923 protein-coding Igsf8 immunoglobulin superfamily member 8 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of cell migration (ortholog); regulation of cell motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); membrane (ortholog) NW_004955468 11877369 11883962 - 102013814 AGCD01052139;GBDI01182195;XM_005400193 XP_005400250 MODEL 8967431 protein-coding Epas1 endothelial PAS domain protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); cobalt ion binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); cell differentiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); azoospermia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955441 13244626 13328220 + 102011250 AGCD01037146;AGCD01037147;AGCD01037148;GBBH01002906;XM_005390973 XP_005391030 MODEL 39131472 protein-coding TRIML2 tripartite motif family like 2 9057121 protein-coding Adrb3 adrenoceptor beta 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); beta-adrenergic receptor activity (ortholog); beta3-adrenergic receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH Alzheimer's disease (ortholog); colitis (ortholog); congestive heart failure (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955463 13663064 13665553 - 102015487 AGCD01049880;GBDJ01253959;XM_005398422 XP_005398479 MODEL 8937019 pseudo LOC102013939 FGFR1 oncogene partner 2 homolog pseudogene NW_004955486 342946 343511 - 102013939 AGCD01058839 MODEL 8858621 protein-coding Cast calpastatin ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); egg activation (ortholog); liver development (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955418 15859951 15974141 - 102011119 AGCD01019113;AGCD01019114;GBBH01060534;GBCB01042291;XM_013512987 XP_013368441 MODEL 8964917 pseudo LOC102011998 derlin-1 pseudogene NW_004955422 13345152 13349677 + 102011998 AGCD01022821 MODEL 9052458 ncrna LOC102002973 uncharacterized LOC102002973 NW_004955402 40884991 40894999 + 102002973 AGCD01001005;XR_259081 MODEL 9042431 protein-coding LOC102010782 cytochrome P450 4A6-like NW_004955464 11443634 11459566 + 102010782 AGCD01050154;GBCQ01010107;XM_005398643 XP_005398700 MODEL 8916547 protein-coding Ankra2 ankyrin repeat family A member 2 ENCODES a protein that exhibits histone deacetylase binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN 3M complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955425 27035850 27045253 + 102005820 AGCD01025959;GBDJ01017286;XM_005386069;XM_005386070 XP_005386126;XP_005386127 MODEL 8737826 protein-coding Alas1 5'-aminolevulinate synthase 1 ENCODES a protein that exhibits 5-aminolevulinate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955532 3810469 3823456 + 102026794 AGCD01070299;GBDF01085642;GBDK01069646;XM_005410344 XP_005410401 MODEL 8846359 protein-coding LOC102008077 olfactory receptor 8B3 NW_004955412 25357388 25358344 - 102008077 AGCD01013151;XM_005378420 XP_005378477 MODEL 8726512 protein-coding Rps27l ribosomal protein S27 like ENCODES a protein that exhibits translation activator activity (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleolus (ortholog) NW_004955450 12122948 12126167 + 102028485 AGCD01042688;AGCD01042689;GBDI01001525;GBDK01022916;XM_005393794 XP_005393851 MODEL 8782010 pseudo LOC102007279 magnesium transporter NIPA2 pseudogene NW_004955439 11430788 11431838 + 102007279 AGCD01035908 MODEL 8974647 protein-coding CUNH2orf80 chromosome unknown C2orf80 homolog ASSOCIATED WITH urinary bladder cancer (ortholog) NW_004955457 6940355 6961464 + 102007305 AGCD01046861;GBDJ01410635;XM_005396967;XM_005396968;XM_013520672 XP_005397024;XP_005397025;XP_013376126 MODEL 10141147 ncrna LOC106150316 uncharacterized LOC106150316 NW_004955471 5077293 5081932 + 106150316 AGCD01053095;XR_001237049 MODEL 8950397 protein-coding Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); chromatin DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cell redox homeostasis (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) NW_004955550 1273170 1275843 + 102025292 AGCD01072559;GBDF01088118;XM_005412062;XM_013508571 XP_005412119;XP_013364025 MODEL 8789208 pseudo LOC102009581 rRNA-processing protein UTP23 homolog pseudogene NW_004955458 15500020 15501069 + 102009581 AGCD01047897 MODEL 8793544 protein-coding Acvr2a activin A receptor type 2A ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); inhibin-betaglycan-ActRII complex (ortholog) NW_004955440 13849926 13931374 + 102022747 AGCD01036454;GBCB01038196;GBDI01068191;XM_005390789 XP_005390846 MODEL 8775179 ncrna LOC102013584 uncharacterized LOC102013584 NW_004955456 7084779 7090828 + 102013584 AGCD01046384;GBDF01281673;XR_001236335 MODEL 8980955 pseudo LOC102013183 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955495 4683150 4684723 - 102013183 AGCD01061943 MODEL 8900505 protein-coding Sertm1 serine rich and transmembrane domain containing 1 ASSOCIATED WITH sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955431 9363917 9384620 - 102027666 AGCD01030177;GBBH01024568;XM_005387677;XM_005387678;XM_005387679 XP_005387734;XP_005387735;XP_005387736 MODEL 8719421 protein-coding Slc2a1 solute carrier family 2 member 1 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); fucose transmembrane transporter activity (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); cellular response to glucose starvation (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; Glut1 deficiency syndrome pathway; hypoxia inducible factor pathway; ASSOCIATED WITH absence epilepsy (ortholog); alcohol dependence (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955537 2408042 2438788 - 102017914 AGCD01070929;AGCD01070930;GBCQ01066583;XM_005410625 XP_005410682 MODEL 8764159 protein-coding LOC102004376 olfactory receptor 2D3-like NW_004955414 22643659 22649023 - 102004376 AGCD01015468;XM_013511769;XM_013511770 XP_013367223;XP_013367224 MODEL 8898480 ncrna LOC102022278 uncharacterized LOC102022278 NW_004955414 29010951 29081914 + 102022278 AGCD01015698;AGCD01015699;XR_260210 MODEL 8927881 protein-coding LOC102003991 olfactory receptor 10W1-like NW_004955511 3029816 3030835 + 102003991 AGCD01066439;GBDF01060938;XM_005408259 XP_005408316 MODEL 8800498 protein-coding LOC102008828 uncharacterized LOC102008828 NW_004955463 7162477 7169673 + 102008828 AGCD01049720;AGCD01049721;GBDF01056767;XM_013521489 XP_013376943 MODEL 39134008 misc_rna 7SK 7SK RNA 8800101 protein-coding Btbd2 BTB domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955495 6072112 6085180 + 102022403 AGCD01062049;AGCD01062050;GBBH01062338;GBDF01084039;XM_005405935 XP_005405992 MODEL 8709800 pseudo LOC102008454 uncharacterized LOC102008454 NW_004955436 22240028 22281455 + 102008454 AGCD01034088;AGCD01034089 MODEL 8904569 pseudo LOC102010786 sodium- and chloride-dependent creatine transporter 1 pseudogene NW_004955412 1303340 1305225 + 102010786 AGCD01012514;XM_005378613 MODEL 9026813 protein-coding Vwc2 von Willebrand factor C domain containing 2 INVOLVED IN negative regulation of BMP signaling pathway (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) NW_004955456 3949885 4075622 - 102006099 AGCD01046288;GBDI01379282;XM_013520509 XP_013375963 MODEL 9052216 protein-coding Snrpc small nuclear ribonucleoprotein polypeptide C ENCODES a protein that exhibits protein homodimerization activity (ortholog); single-stranded RNA binding (ortholog); U1 snRNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 2770251 2830871 + 102019321 AGCD01034286;AGCD01034287;AGCD01034288;GBDF01144864;XM_013516970;XM_013516971 XP_013372424;XP_013372425 MODEL 8722473 protein-coding LOC102004742 olfactory receptor 5D18-like NW_004955511 617821 618762 + 102004742 AGCD01066336;XM_005408202 XP_005408259 MODEL 39134287 misc_rna 7SK 7SK RNA 8866399 protein-coding CUNH3orf18 chromosome unknown C3orf18 homolog ASSOCIATED WITH lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955532 2339628 2349324 - 102013757 AGCD01070224;GBCB01111799;XM_005410302;XM_005410303 XP_005410359;XP_005410360 MODEL 39131482 protein-coding BIRC5 baculoviral IAP repeat containing 5 8999998 protein-coding Cd14 CD14 molecule ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); lipoteichoic acid binding (ortholog); INVOLVED IN cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to diacyl bacterial lipopeptide (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN cardiovascular system disease pathway; innate immune response pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Adrenal Insufficiency (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955418 73736 75345 + 102029626 AGCD01018666;GBDK01066282;XM_005382018 XP_005382075 MODEL 8974473 protein-coding Atp5po ATP synthase peripheral stalk subunit OSCP ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); estradiol binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to cytokine stimulus (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cell surface (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955407 33288194 33298817 - 102025210 AGCD01007697;GBCQ01008219;XM_005375698 XP_005375755 MODEL 8955627 protein-coding Cdh3 cadherin 3 INVOLVED IN cell-cell adhesion (ortholog); hair cycle process (ortholog); hair follicle maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); plasma membrane (ortholog) NW_004955484 7937847 7985418 - 102006351 AGCD01058359;AGCD01058360;AGCD01058361;GBBH01002203;XM_013503938 XP_013359392 MODEL 8954281 ncrna LOC102005805 uncharacterized LOC102005805 NW_004955417 31526897 31527811 + 102005805 AGCD01018654;GBDI01226891;XR_260525 MODEL 8883826 protein-coding LOC102009989 putative uncharacterized protein encoded by LINC00521 NW_004955438 16063238 16071161 + 102009989 AGCD01035395;GBDF01002712;XM_005390358;XM_005390359;XM_005390360;XM_005390361;XM_005390362 XP_005390415;XP_005390416;XP_005390417;XP_005390418;XP_005390419 MODEL 39131995 rrna 5S_rRNA 5S ribosomal RNA 39134140 misc_rna 7SK 7SK RNA 8939819 protein-coding Fgd3 FYVE, RhoGEF and PH domain containing 3 INVOLVED IN filopodium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955515 4967862 5025604 - 102025497 AGCD01067334;GBBH01035013;XM_013506892;XM_013506893;XM_013506894;XM_013506896;XM_013506897;XM_013506898;XM_013506899 XP_013362346;XP_013362347;XP_013362348;XP_013362350;XP_013362351;XP_013362352;XP_013362353 MODEL 8731632 protein-coding LOC102018178 olfactory receptor 10T2-like NW_004955414 23717094 23718032 + 102018178 AGCD01015518;XM_005380522 XP_005380579 MODEL 8930109 protein-coding Cited1 Cbp/p300 interacting transactivator with ED-rich tail 1 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); LBD domain binding (ortholog); INVOLVED IN brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); embryonic axis specification (ortholog); ASSOCIATED WITH Kidney Reperfusion Injury (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955475 11722514 11725067 - 102013715 AGCD01055167;GBDF01263729;GBDK01278752;XM_005401687 XP_005401744 MODEL 9054330 pseudo LOC102013585 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like NW_004955456 11429523 11430045 + 102013585 AGCD01046551 MODEL 8939476 protein-coding Plcl1 phospholipase C like 1 (inactive) ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); regulation of synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog) NW_004955403 2643092 2904651 - 102011717 AGCD01001738;AGCD01001739;AGCD01001740;GBDI01356679;XM_005373259;XM_013511993;XM_013511996;XM_013512003;XM_013512012;XM_013512015;XM_013512018;XM_013512022 XP_005373316;XP_013367447;XP_013367450;XP_013367457;XP_013367466;XP_013367469;XP_013367472;XP_013367476 MODEL 8703873 protein-coding Dlc1 DLC1 Rho GTPase activating protein ENCODES a protein that exhibits GTPase activator activity (ortholog); phospholipase binding (ortholog); phospholipase C activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to insulin stimulus (ortholog); focal adhesion assembly (ortholog); PARTICIPATES IN Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); colorectal cancer (ortholog); FOUND IN actin filament (ortholog); caveola (ortholog); cortical actin cytoskeleton (ortholog) NW_004955463 3599415 3981187 + 102014429 AGCD01049591;AGCD01049592;AGCD01049593;AGCD01049594;AGCD01049595;AGCD01049596;AGCD01049597;AGCD01049598;AGCD01049599;AGCD01049600;GBCE01115032;XM_005398346;XM_013521500;XM_013521501;XM_013521502 XP_005398403;XP_013376954;XP_013376955;XP_013376956 MODEL 9035769 protein-coding Rbm24 RNA binding motif protein 24 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA CDS binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); DNA damage response (ortholog); endocardial cushion development (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); sarcoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955483 8705533 8716772 - 102024340 AGCD01057842;GBDI01258799;XM_005403407;XM_005403408 XP_005403464;XP_005403465 MODEL 8705851 protein-coding Igsf9 immunoglobulin superfamily member 9 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); INVOLVED IN dendrite development (ortholog); homophilic cell-cell adhesion (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955468 11722716 11741622 - 102011298 AGCD01052137;GBDF01166084;XM_005400184;XM_005400186;XM_005400187 XP_005400241;XP_005400243;XP_005400244 MODEL 9029469 pseudo LOC102011585 small ubiquitin-related modifier 2 pseudogene NW_004955437 7866518 7866791 + 102011585 AGCD01034470 MODEL 8816883 protein-coding Epb41 erythrocyte membrane protein band 4.1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); actin binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); protein-containing complex assembly (ortholog); regulation of calcium ion transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Elliptocytosis 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell cortex (ortholog); cortical cytoskeleton (ortholog) NW_004955452 7930095 8123165 + 102021512 AGCD01044202;AGCD01044203;AGCD01044204;AGCD01044205;AGCD01044206;AGCD01044207;AGCD01044208;AGCD01044209;GBBH01033044;XM_005394970;XM_013519473;XM_013519474;XM_013519475;XM_013519476;XM_013519477;XM_013519478 XP_005395027;XP_013374927;XP_013374928;XP_013374929;XP_013374930;XP_013374931;XP_013374932 MODEL 8824245 protein-coding Slc2a10 solute carrier family 2 member 10 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN artery development (ortholog); cell redox homeostasis (ortholog); D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH Aneurysm (ortholog); anxiety disorder (ortholog); aortic aneurysm (ortholog); FOUND IN cytosol (ortholog); endomembrane system (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955445 10708147 10722109 - 102016323 AGCD01039677;AGCD01039678;GBDF01078357;XM_005392370 XP_005392427 MODEL 8873585 protein-coding Triml2 tripartite motif family like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to retinoic acid (ortholog) NW_004955403 21089194 21104840 + 102006531 AGCD01002180;GBDF01242145;XM_013514804 XP_013370258 MODEL 39132232 rrna 5S_rRNA 5S ribosomal RNA 8982295 ncrna LOC102006897 uncharacterized LOC102006897 NW_004955469 7416386 7428166 + 102006897 AGCD01052415;GBDF01307558;XR_263435 MODEL 9065271 protein-coding Abitram actin binding transcription modulator ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); regulation of actin filament polymerization (ortholog); regulation of filopodium assembly (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN dendrite (ortholog); filopodium tip (ortholog); growth cone (ortholog) NW_004955419 18029763 18034945 - 102021243 AGCD01020168;GBCE01011765;XM_005382759 XP_005382816 MODEL 8929419 pseudo LOC102013940 28S ribosomal protein S36, mitochondrial pseudogene NW_004955492 8167760 8168071 + 102013940 AGCD01060808;XM_005404994 MODEL 9012517 ncrna LOC102012000 uncharacterized LOC102012000 NW_004955423 27287604 27301513 + 102012000 AGCD01024120;AGCD01024121;GBCE01127032;XR_001234059 MODEL 8854725 protein-coding Castor1 cytosolic arginine sensor for mTORC1 subunit 1 ENCODES a protein that exhibits arginine binding (ortholog); identical protein binding (ortholog); molecular sensor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to L-arginine (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); GATOR2 complex (ortholog) NW_004955455 4530842 4535358 - 102018257 AGCD01045679;GBBH01164658;XM_005396250;XM_013520370;XM_013520371 XP_005396307;XP_013375824;XP_013375825 MODEL 9061272 pseudo LOC102002975 L-lactate dehydrogenase A chain pseudogene NW_004955402 36734047 36736688 - 102002975 AGCD01000933 MODEL 39133685 misc_rna 7SK 7SK RNA 8734591 protein-coding Ascl3 achaete-scute family bHLH transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN epithelium development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955414 24688233 24691361 - 102024994 AGCD01015553;GBBH01032886;XM_005380248 XP_005380305 MODEL 8814219 ncrna LOC102007282 uncharacterized LOC102007282 NW_004955442 18390450 18391001 - 102007282 AGCD01038005;GBDK01116847;XR_001235431 MODEL 8733930 protein-coding Cep170b centrosomal protein 170B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955538 3261900 3283274 + 102028337 AGCD01071156;AGCD01071157;GBCE01154808;GBDK01147734;XM_013507900;XM_013507901 XP_013363354;XP_013363355 MODEL 8826626 protein-coding LOC102010789 histone H1.0 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN chromosome condensation (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); euchromatin (ortholog) NW_004955413 24182547 24184588 + 102010789 AGCD01014355;GBBH01030914;XM_005379227 XP_005379284 MODEL 8733286 protein-coding Prdm16 PR/SET domain 16 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN beige fat cell differentiation (ortholog); brown fat cell differentiation (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH anxiety disorder (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); asthma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955486 8139848 8327788 - 102028759 AGCD01059147;GBCQ01101271;GBDI01386309;XM_013504223 XP_013359677 MODEL 39134289 misc_rna 7SK 7SK RNA 8756139 ncrna LOC102008079 uncharacterized LOC102008079 NW_004955413 2802254 2809284 + 102008079 AGCD01013559;GBCB01093657;XR_001233052;XR_260052 MODEL 8965931 pseudo LOC102009587 39S ribosomal protein L30, mitochondrial pseudogene NW_004955464 11215198 11215862 + 102009587 AGCD01050139 MODEL 8745588 protein-coding Rps28 ribosomal protein S28 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); ribosomal small subunit biogenesis (ortholog); ribosome biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 15 with mandibulofacial dysostosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955563 1073556 1074149 - 102015161 AGCD01074111;GBCQ01007669;XM_005413132 XP_005413189 MODEL 10252636 ncrna LOC106150317 uncharacterized LOC106150317 NW_004955471 5899639 5915207 - 106150317 AGCD01053115;GBDI01307991;XR_001237051;XR_001237052 MODEL 9057686 pseudo LOC102004377 40S ribosomal protein S2-like NW_004955470 11454325 11473606 - 102004377 AGCD01052889 MODEL 153211024 protein-coding ADRB3 adrenoceptor beta 3 8713676 protein-coding Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 ENCODES a protein that exhibits double-stranded DNA 3'-5' DNA exonuclease activity (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); mitochondrial inner membrane (ortholog) NW_004955475 2343992 2359492 + 102024790 AGCD01054801;GBCB01086482;XM_005401531 XP_005401588 MODEL 8923832 pseudo LOC102003992 aldose reductase-related protein 2 pseudogene NW_004955430 5217088 5218084 + 102003992 AGCD01029256 MODEL 8780512 protein-coding Igsf9b immunoglobulin superfamily member 9B ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); positive regulation of inhibitory postsynaptic potential (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); inhibitory synapse (ortholog) NW_004955412 34712556 34828013 - 102027734 AGCD01013391;AGCD01013392;GBBH01149995;XM_005378583;XM_013511161;XM_013511162 XP_005378640;XP_013366615;XP_013366616 MODEL 8920404 protein-coding Ankrd1 ankyrin repeat domain 1 ENCODES a protein that exhibits actin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); I band (ortholog) NW_004955425 2258554 2267699 + 102011460 AGCD01025257;GBDI01025686;XM_005385837;XM_005385838 XP_005385894;XP_005385895 MODEL 8709807 pseudo LOC102008830 ATP synthase F(0) complex subunit C3, mitochondrial pseudogene NW_004955464 13405011 13405720 + 102008830 AGCD01050275 MODEL 39134009 misc_rna 7SK 7SK RNA 8850365 protein-coding Alas2 5'-aminolevulinate synthase 2 ENCODES a protein that exhibits 5-aminolevulinate synthase activity (ortholog); coenzyme A binding (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); heme B biosynthetic process (ortholog); heme biosynthetic process (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955475 2362368 2382680 - 102026315 AGCD01054801;GBBH01034987;XM_005401537;XM_005401538 XP_005401594;XP_005401595 MODEL 8880388 protein-coding Acvr2b activin A receptor type 2B ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type II (ortholog); growth factor binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH Anthracycline-induced Cardiotoxicity (ortholog); Brain Hypoxia-Ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955427 25438652 25467360 - 102005280 AGCD01027540;GBDF01195103;GBDK01307517;XM_005386590;XM_005386591 XP_005386647;XP_005386648 MODEL 39131567 protein-coding SERTM2 serine rich and transmembrane domain containing 2 8700900 protein-coding ATP6 ATP synthase F0 subunit 6 MT 7932 8612 + 15822207 JX312692 AFQ55782;YP_008080750 REVIEWED 8884400 protein-coding Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); connective tissue disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955402 10283970 10294869 + 102028039 AGCD01000256;AGCD01000257;AGCD01000258;GBDK01005303;XM_005372689;XM_005372690 XP_005372746;XP_005372747 MODEL 8845253 ncrna LOC102022281 uncharacterized LOC102022281 NW_004955476 9313471 9320745 + 102022281 AGCD01055382;GBDF01119901;XR_263628;XR_263629 MODEL 39132233 rrna 5S_rRNA 5S ribosomal RNA 8839010 protein-coding Cdh4 cadherin 4 INVOLVED IN axon guidance (ortholog); heterophilic cell-cell adhesion (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955528 2040373 2594602 - 102013964 AGCD01069581;AGCD01069582;AGCD01069583;AGCD01069584;AGCD01069585;AGCD01069586;AGCD01069587;GBCQ01107558;GBDI01141363;XM_013507435 XP_013362889 MODEL 8922155 pseudo LOC102005812 G kinase-anchoring protein 1 pseudogene NW_004955488 1169951 1171056 + 102005812 AGCD01059491 MODEL 39134141 misc_rna 7SK 7SK RNA 8977400 pseudo LOC102004744 UMP-CMP kinase pseudogene NW_004955515 4019058 4025494 - 102004744 AGCD01067313 MODEL 8869251 protein-coding LOC102002978 zinc finger protein 14-like NW_004955607 144382 181560 + 102002978 AGCD01076977;GBCB01041249;XM_013510111;XM_013510112;XM_013510113 XP_013365565;XP_013365566;XP_013365567 MODEL 9042158 protein-coding Btbd3 BTB domain containing 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cerebral cortex development (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955415 21588669 21602990 + 102027294 AGCD01016513;GBDF01221665;XM_005380880;XM_005380882;XM_013512365 XP_005380937;XP_005380939;XP_013367819 MODEL 9012039 protein-coding Vwc2l von Willebrand factor C domain containing 2 like INVOLVED IN negative regulation of BMP signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); extracellular region (ortholog) NW_004955457 1392622 1540314 - 102021522 AGCD01046723;AGCD01046724;AGCD01046725;AGCD01046726;AGCD01046727;GBDF01130103;XM_013520670;XM_013520671 XP_013376124;XP_013376125 MODEL 8862508 ncrna LOC102018180 uncharacterized LOC102018180 NW_004955416 11264103 11270327 - 102018180 AGCD01017181;GBDF01051838;XR_001233298 MODEL 8871029 protein-coding Fgd4 FYVE, RhoGEF and PH domain containing 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); INVOLVED IN lamellipodium assembly (ortholog); microspike assembly (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); FOUND IN filopodium (ortholog); lamellipodium (ortholog) NW_004955505 3108131 3314040 - 102009403 AGCD01065015;AGCD01065016;AGCD01065017;AGCD01065018;AGCD01065019;AGCD01065020;GBBH01177094;GBCE01037509;XM_013505926 XP_013361380 MODEL 8965290 protein-coding Cited2 Cbp/p300 interacting transactivator with ED-rich tail 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone acetyltransferase binding (ortholog); LBD domain binding (ortholog); INVOLVED IN adrenal cortex formation (ortholog); adrenal gland development (ortholog); blood vessel development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); atrial heart septal defect 8 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955436 20370950 20372677 + 102012124 AGCD01034022;GBDJ01003478;XM_005389258 XP_005389315 MODEL 8781231 ncrna LOC102008455 uncharacterized LOC102008455 NW_004955437 7726888 7728942 - 102008455 AGCD01034465;GBDF01111441;XR_261864;XR_261865 MODEL 8713398 ncrna LOC102013185 uncharacterized LOC102013185 NW_004955495 5765435 5770369 - 102013185 AGCD01062026;AGCD01062027;GBDF01083739;XR_264157 MODEL 8871366 ncrna LOC102013588 uncharacterized LOC102013588 NW_004955460 8620087 8620963 - 102013588 AGCD01048528;GBBH01206621;XR_001236520 MODEL 8716418 protein-coding CUNH3orf38 chromosome unknown C3orf38 homolog INVOLVED IN positive regulation of apoptotic process (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955407 5339389 5348894 - 102022463 AGCD01006912;AGCD01006913;GBDK01359287;XM_005375526;XM_005375527 XP_005375583;XP_005375584 MODEL 9014306 pseudo LOC102011588 uncharacterized LOC102011588 NW_004955437 2264085 2299089 - 102011588 AGCD01034263 MODEL 8931799 protein-coding Rps29 ribosomal protein S29 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); zinc ion binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH cervical cancer (ortholog); Diamond-Blackfan anemia 13 (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955409 13056022 13057530 + 102003841 AGCD01009587;GBDF01001676;XM_005376848 XP_005376905 MODEL 8824021 protein-coding Birc6 baculoviral IAP repeat containing 6 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN labyrinthine layer development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); autism spectrum disorder (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955441 740299 923920 + 102009992 AGCD01036733;AGCD01036734;AGCD01036735;AGCD01036736;AGCD01036737;AGCD01036738;AGCD01036739;AGCD01036740;GBDF01124876;XM_013517560;XM_013517561 XP_013373014;XP_013373015 MODEL 8865432 protein-coding Rbm25 RNA binding motif protein 25 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog) NW_004955523 2213766 2270417 - 102029658 AGCD01068560;AGCD01068561;GBDJ01126912;XM_005409430;XM_013507153 XP_005409487;XP_013362607 MODEL 8762786 protein-coding Cd151 CD151 molecule (Raph blood group) ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of cell migration (ortholog); positive regulation of endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Epidermolysis Bullosa Simplex 7, with Nephropathy and Deafness (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955476 11294359 11298990 - 102008405 AGCD01055447;AGCD01055448;GBBH01031085;GBCE01004306;XM_005401807 XP_005401864 MODEL 8810390 ncrna LOC102006898 uncharacterized LOC102006898 NW_004955414 6093328 6094333 - 102006898 AGCD01014908;GBBH01201308;XR_260154 MODEL 8984806 protein-coding Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ENCODES a protein that exhibits actin filament binding (ortholog); ATP binding (ortholog); bubble DNA binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); activated T cell proliferation (ortholog); PARTICIPATES IN p53 signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell leading edge (ortholog); cytoplasm (ortholog) NW_004955513 652048 799182 + 102017368 AGCD01066829;AGCD01066830;AGCD01066831;AGCD01066832;GBDF01082882;XM_005408347;XM_005408348 XP_005408404;XP_005408405 MODEL 39131996 rrna 5S_rRNA 5S ribosomal RNA 8907005 protein-coding Slc2a11 solute carrier family 2 member 11 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); fructose transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955455 8374144 8399766 - 102010337 AGCD01045888;GBCE01119522;XM_005396414;XM_005396415 XP_005396471;XP_005396472 MODEL 9004574 pseudo LOC102009990 retinol dehydrogenase 11 pseudogene NW_004955438 7901724 7902409 - 102009990 AGCD01035148 MODEL 8974569 protein-coding Ascl5 achaete-scute family bHLH transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH lobodontia (ortholog); FOUND IN chromatin (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955406 37264753 37265337 - 102004240 AGCD01006572;XM_005375475 XP_005375532 MODEL 8924632 protein-coding Prdm2 PR/SET domain 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone H3K9 methyltransferase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955527 4005410 4105376 - 102017379 AGCD01069493;AGCD01069494;AGCD01069495;AGCD01069496;GBBH01115652;GBBH01165184;XM_013507399 XP_013362853 MODEL 39133686 misc_rna 7SK 7SK RNA 8772556 ncrna LOC102007285 uncharacterized LOC102007285 NW_004955447 3220418 3236619 + 102007285 AGCD01040582;GBCQ01008302;XR_262410 MODEL 8940184 ncrna LOC102010796 uncharacterized LOC102010796 NW_004955473 4935115 4942810 - 102010796 AGCD01053962;GBDK01418846;XR_001237109;XR_263580 MODEL 39134291 misc_rna 7SK 7SK RNA 8873605 protein-coding LOC102008080 cytochrome c-like NW_004955413 7665162 7665698 - 102008080 AGCD01013828;GBDF01269962;XM_005378936 XP_005378993 MODEL 8981727 protein-coding LOC102013941 zinc finger protein 717-like NW_004955422 24138776 24154323 - 102013941 AGCD01023215;GBDF01303385;XM_005384707;XM_005384708 XP_005384764;XP_005384765 MODEL 8701729 protein-coding Cep19 centrosomal protein 19 INVOLVED IN cilium assembly (ortholog); microtubule anchoring at centrosome (ortholog); trans-Golgi to periciliary membrane compartment transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cone-rod dystrophy (ortholog); Morbid Obesity and Spermatogenic Failure (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955420 12823663 12829598 - 102014673 AGCD01020897;GBDF01225980;XM_005383140;XM_005383141 XP_005383197;XP_005383198 MODEL 8912037 protein-coding Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955574 157769 164947 - 102018238 AGCD01075087;AGCD01075088;GBCC01043779;XM_005413802 XP_005413859 MODEL 8868064 protein-coding Alb albumin ENCODES a protein that exhibits DNA binding (ortholog); enterobactin binding (ortholog); enzyme binding (ortholog); INVOLVED IN bilirubin transport (ortholog); cellular response to calcium ion starvation (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; organophosphate response pathway; ASSOCIATED WITH suppurative otitis media; Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); FOUND IN extracellular region; basement membrane (ortholog); cytoplasm (ortholog) NW_004955447 9327 21212 - 102017521 AGCD01040426;AGCD01040427;AGCD01040428;AGCD01040429;AGCD01040430;GBCB01023892;GBDI01069567;XM_005392761 XP_005392818 MODEL 8814861 pseudo LOC102004378 transaldolase pseudogene NW_004955414 21830353 21833227 + 102004378 AGCD01015433 MODEL 8749377 protein-coding Ihh Indian hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); morphogen activity (ortholog); patched binding (ortholog); INVOLVED IN bone resorption (ortholog); branching involved in blood vessel morphogenesis (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acrocapitofemoral dysplasia (ortholog); acromesomelic dysplasia, Maroteaux type (ortholog); annular pancreas (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955453 14376665 14382536 + 102024084 AGCD01044864;GBCQ01087658;XM_005395596 XP_005395653 MODEL 8895606 protein-coding LOC102012002 probable N-acetyltransferase CML1 NW_004955424 12018064 12026229 + 102012002 AGCD01024589;GBCQ01036370;XM_005385547;XM_005385548;XM_005385549;XM_005385551;XM_013514658;XM_013514659;XM_013514660;XM_013514661 XP_005385604;XP_005385605;XP_005385606;XP_005385608;XP_013370112;XP_013370113;XP_013370114;XP_013370115 MODEL 8753974 protein-coding Dld dihydrolipoamide dehydrogenase ENCODES a protein that exhibits dihydrolipoyl dehydrogenase (NADH) activity (ortholog); flavin adenine dinucleotide binding (ortholog); lipoamide binding (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Abdominal Pain (ortholog); Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN acrosomal matrix (ortholog); branched-chain alpha-ketoacid dehydrogenase complex (ortholog); cilium (ortholog) NW_004955410 12212981 12238561 + 102008070 AGCD01010846;AGCD01010847;AGCD01010848;AGCD01010849;AGCD01010850;GBCE01096063;XM_005377291;XM_013510668 XP_005377348;XP_013366122 MODEL 8723177 pseudo LOC102003996 40S ribosomal protein S20 pseudogene NW_004955513 5462592 5467878 + 102003996 AGCD01066971 MODEL 39131997 rrna 5S_rRNA 5S ribosomal RNA 39134010 misc_rna 7SK 7SK RNA 9063939 protein-coding Ankrd10 ankyrin repeat domain 10 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955404 1928285 1954193 + 102019014 AGCD01003237;AGCD01003238;GBBH01002947;XM_005373997;XM_013515744;XR_259288 XP_005374054;XP_013371198 MODEL 9022593 protein-coding Plcl2 phospholipase C like 2 ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN B cell proliferation involved in immune response (ortholog); B-1a B cell differentiation (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955430 9157074 9347366 + 102028997 AGCD01029407;AGCD01029408;AGCD01029409;GBCE01152675;GBDJ01186898;XM_005387455 XP_005387512 MODEL 8880886 protein-coding Acvrl1 activin A receptor like type 1 ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type I (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); artery development (ortholog); blood circulation (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH adenosine deaminase deficiency (ortholog); arteriovenous malformation (ortholog); arteriovenous malformations of the brain (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955547 2278548 2293865 + 102028803 AGCD01072266;GBDK01001484;XM_005411918;XM_005411919;XM_013508491;XM_013508492;XM_013508494;XM_013508495 XP_005411975;XP_005411976;XP_013363945;XP_013363946;XP_013363948;XP_013363949 MODEL 9046128 protein-coding Sesn1 sestrin 1 ENCODES a protein that exhibits L-leucine binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); GATOR2 complex (ortholog) NW_004955411 34033986 34051171 - 102015489 AGCD01012378;AGCD01012379;GBCB01023930;GBDF01121431;XM_013510807 XP_013366261 MODEL 9026647 protein-coding Epb41l1 erythrocyte membrane protein band 4.1 like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 11 (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955422 25338135 25456376 - 102028431 AGCD01023248;AGCD01023249;AGCD01023250;GBCE01186960;XM_005384755;XM_005384756;XM_005384758;XM_005384760;XM_013514214;XM_013514215;XM_013514216 XP_005384812;XP_005384813;XP_005384815;XP_005384817;XP_013369668;XP_013369669;XP_013369670 MODEL 8851646 ncrna LOC102013192 uncharacterized LOC102013192 NW_004955427 8815744 8828819 + 102013192 AGCD01027078;XR_261244 MODEL 9060620 protein-coding Btbd6 BTB domain containing 6 NW_004955538 3494950 3496888 + 102005179 AGCD01071166;GBBH01033922;GBCE01001883;XM_005410859 XP_005410916 MODEL 8782188 protein-coding LOC102013593 interferon lambda-2 NW_004955468 254857 256530 - 102013593 AGCD01051686;XM_013522285 XP_013377739 MODEL 8963821 protein-coding Adrm1 ADRM1 26S proteasome ubiquitin receptor ENCODES a protein that exhibits endopeptidase activator activity (ortholog); molecular function inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN adipose tissue development (ortholog); follicle-stimulating hormone signaling pathway (ortholog); oogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955528 1753450 1759886 - 102029897 AGCD01069569;GBDF01001670;XM_005410026 XP_005410083 MODEL 9033725 protein-coding Cd160 CD160 molecule ENCODES a protein that exhibits activating MHC class I receptor activity (ortholog); kinase binding (ortholog); MHC class I protein complex binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); mucosal immune response (ortholog); negative regulation of adaptive immune memory response (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955568 365700 372149 - 102008159 AGCD01074513;XM_013509328 XP_013364782 MODEL 10081628 ncrna LOC106150318 uncharacterized LOC106150318 NW_004955402 46337271 46342387 - 106150318 AGCD01001155;GBDJ01111390;XR_001237057 MODEL 39132235 rrna 5S_rRNA 5S ribosomal RNA 8900622 protein-coding Rbm26 RNA binding motif protein 26 ASSOCIATED WITH acute myeloid leukemia (ortholog); anthracosis (ortholog); Breast Cancer, Familial (ortholog) NW_004955404 28116009 28198878 + 102008176 AGCD01003945;AGCD01003946;AGCD01003947;GBBH01077994;GBDF01050484;XM_013516361;XM_013516363;XM_013516366;XM_013516370 XP_013371815;XP_013371817;XP_013371820;XP_013371824 MODEL 8874391 ncrna LOC102005816 uncharacterized LOC102005816 NW_004955423 3544871 3634123 + 102005816 AGCD01023515;AGCD01023516;GBDF01047727;XR_260951 MODEL 9005735 protein-coding Cdh5 cadherin 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); BMP receptor binding (ortholog); cell-cell adhesion mediator activity (ortholog); INVOLVED IN adherens junction organization (ortholog); bicellular tight junction assembly (ortholog); blood vessel endothelial cell migration (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) NW_004955433 22957718 22994515 + 102019629 AGCD01031949;AGCD01031950;AGCD01031951;GBDJ01179589;XM_005388461 XP_005388518 MODEL 8731982 protein-coding LOC102002979 olfactory receptor 4F17-like NW_004955614 313170 316184 - 102002979 AGCD01077239;GBDF01177112;XM_013510137 XP_013365591 MODEL 39133688 misc_rna 7SK 7SK RNA 8881253 pseudo LOC102010800 splicing regulatory glutamine/lysine-rich protein 1-like NW_004955479 4446160 4449021 - 102010800 AGCD01056323 MODEL 8755491 protein-coding Fgd5 FYVE, RhoGEF and PH domain containing 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955429 17297123 17367365 + 102008443 AGCD01028850;AGCD01028851;AGCD01028852;AGCD01028853;GBDK01396571;XM_013515358 XP_013370812 MODEL 8950643 pseudo LOC102008467 E3 ubiquitin-protein ligase HECTD3 pseudogene NW_004955442 14068251 14074752 - 102008467 AGCD01037801 MODEL 8803216 protein-coding Plcxd1 phosphatidylinositol specific phospholipase C X domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955499 574421 585386 + 102023053 AGCD01063242;AGCD01063243;AGCD01063244;GBDK01020725;GBDK01033039;XM_013505584;XM_013505585;XM_013505586;XM_013505587;XM_013505588 XP_013361038;XP_013361039;XP_013361040;XP_013361041;XP_013361042 MODEL 8986694 protein-coding Cited4 Cbp/p300 interacting transactivator with ED-rich tail 4 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); response to estrogen (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955537 688264 689562 - 102004857 AGCD01070870;GBDK01058306;XM_005410581 XP_005410638 MODEL 39134293 misc_rna 7SK 7SK RNA 9039003 ncrna LOC102011589 uncharacterized LOC102011589 NW_004955540 3450472 3456881 - 102011589 AGCD01071339;GBDF01209410;XR_001232117;XR_001232118;XR_264829 MODEL 8792434 protein-coding Birc7 baculoviral IAP repeat containing 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH adrenocortical carcinoma (ortholog); bladder urothelial carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955528 919246 922581 - 102010730 AGCD01069547;XM_013507431 XP_013362885 MODEL 9020739 protein-coding CUNH3orf62 chromosome unknown C3orf62 homolog INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955532 1243732 1245499 - 102011802 AGCD01070174;GBDF01008216;GBDI01135952;XM_005410196 XP_005410253 MODEL 8903147 pseudo LOC102022286 WW domain-binding protein 11 pseudogene NW_004955479 5664384 5666264 - 102022286 AGCD01056360 MODEL 8802192 protein-coding Aph1a aph-1A gamma-secretase subunit ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid precursor protein metabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 506297 509787 + 102016038 AGCD01013472;GBBH01063314;XM_005378689 XP_005378746 MODEL 8938138 protein-coding LOC102009589 olfactory receptor 8B12-like NW_004955412 25555457 25557190 - 102009589 AGCD01013160;XM_005378425 XP_005378482 MODEL 9062428 protein-coding Vwce von Willebrand factor C and EGF domains ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955511 6235934 6251186 + 102018755 AGCD01066598;GBCQ01151731;XM_005408169 XP_005408226 MODEL 9004375 protein-coding Atp6ap1 ATPase H+ transporting accessory protein 1 ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); molecular function activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to increased oxygen levels (ortholog); endosome to plasma membrane protein transport (ortholog); ASSOCIATED WITH Ascites (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); endosome membrane (ortholog) NW_004955580 927546 934633 + 102030685 AGCD01075630;GBDF01086635;XM_005414198 XP_005414255 MODEL 39134142 misc_rna 7SK 7SK RNA 9000067 protein-coding LOC102006902 serine protease inhibitor Kazal-type 9 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of proteolysis (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) NW_004955415 5971642 5977559 + 102006902 AGCD01016005;GBDJ01000916;XM_005380641;XM_013512380 XP_005380698;XP_013367834 MODEL 8779755 protein-coding Rps3 ribosomal protein S3 ENCODES a protein that exhibits class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chromosomal Instability (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955414 16436899 16442325 - 102026628 AGCD01015214;GBDJ01025673;XM_005379890 XP_005379947 MODEL 8827968 protein-coding Trio trio Rho guanine nucleotide exchange factor ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of fat cell differentiation (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955426 3647273 3846916 + 102008555 AGCD01026083;AGCD01026084;GBCQ01175997;XM_005386123;XM_013514974 XP_005386180;XP_013370428 MODEL 8990815 ncrna LOC102009994 uncharacterized LOC102009994 NW_004955551 302834 319846 + 102009994 AGCD01072654;GBDF01089175;XR_264922 MODEL 39131998 rrna 5S_rRNA 5S ribosomal RNA 8997286 protein-coding Asf1a anti-silencing function 1A histone chaperone ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); DNA replication-dependent chromatin assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH melanoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955436 1635397 1640989 + 102011241 AGCD01033583;GBCQ01039950;XM_005389126 XP_005389183 MODEL 8850916 ncrna LOC102018185 uncharacterized LOC102018185 NW_004955481 6299681 6301761 - 102018185 AGCD01057023;GBCE01032788;XR_263784 MODEL 8917461 protein-coding Castor2 cytosolic arginine sensor for mTORC1 subunit 2 ENCODES a protein that exhibits arginine binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to L-arginine (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytosol (ortholog); GATOR2 complex (ortholog) NW_004955456 13242401 13282469 + 102013907 AGCD01046582;AGCD01046583;GBCE01052863;GBCQ01174661;XM_005396733 XP_005396790 MODEL 8966681 protein-coding Dlec1 DLEC1 cilia and flagella associated protein ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955421 4889860 4957787 + 102013511 AGCD01021704;AGCD01021705;AGCD01021706;AGCD01021707;GBDF01153178;XM_005383726 XP_005383783 MODEL 9007008 pseudo LOC102008087 Y+L amino acid transporter 2 pseudogene NW_004955472 118385 120399 + 102008087 AGCD01053315 MODEL 8738277 protein-coding LOC102004387 C-C motif chemokine 8-like NW_004955481 9082226 9083739 + 102004387 AGCD01057094;GBBH01002161;XM_005402840 XP_005402897 MODEL 9013002 protein-coding Prdm4 PR/SET domain 4 ENCODES a protein that exhibits death receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); cellular response to nutrient (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955405 41335019 41354625 - 102028263 AGCD01005547;GBCB01088054;XM_005374642;XM_005374643 XP_005374699;XP_005374700 MODEL 8794075 protein-coding LOC102012004 cx9C motif-containing protein 4-like NW_004955425 2298142 2298943 - 102012004 AGCD01025257;GBDF01080910;XM_005385839 XP_005385896 MODEL 8963166 pseudo LOC102004747 40S ribosomal protein SA pseudogene NW_004955526 2686932 2687895 - 102004747 AGCD01069310 MODEL 8921205 protein-coding Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); actin filament organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955406 18435984 18527967 - 102028934 AGCD01006035;AGCD01006036;AGCD01006037;AGCD01006038;AGCD01006039;AGCD01006040;AGCD01006041;AGCD01006042;GBDI01026839;XM_005374945;XM_005374946;XM_005374949;XM_005374950 XP_005375002;XP_005375003;XP_005375006;XP_005375007 MODEL 39134011 misc_rna 7SK 7SK RNA 8707198 protein-coding Alcam activated leukocyte cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axon guidance (ortholog); heterophilic cell-cell adhesion (ortholog); motor neuron axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); FOUND IN axon (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955427 6494657 6544668 + 102009083 AGCD01027030;GBBH01035028;GBCC01001133;XM_005386343 XP_005386400 MODEL 8775596 protein-coding Slc2a12 solute carrier family 2 member 12 INVOLVED IN D-glucose transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cell junction (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955439 2482440 2539510 + 102007699 AGCD01035651;AGCD01035652;GBDF01156647;XM_005390508;XM_005390509;XM_013517402 XP_005390565;XP_005390566;XP_013372856 MODEL 8709119 protein-coding LOC102007286 prolactin-like NW_004955576 959769 969369 + 102007286 AGCD01075349;GBDK01091111;XM_005413940 XP_005413997 MODEL 9009364 pseudo LOC102002981 non-histone chromosomal protein HMG-14 pseudogene NW_004955633 74576 86858 - 102002981 AGCD01077593;AGCD01077594;AGCD01077595;XM_005415041;XR_265177 MODEL 8766851 protein-coding Iho1 interactor of HORMAD1 1 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955532 1198316 1226875 + 102007590 AGCD01070171;AGCD01070172;AGCD01070173;GBDF01126604;GBDF01126605;XM_013507565 XP_013363019 MODEL 9060390 protein-coding Acy1 aminoacylase 1 ENCODES a protein that exhibits aminoacylase activity (ortholog); formylmethionine deformylase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Aminoacylase 1 Deficiency (ortholog); pre-malignant neoplasm (ortholog); renal cell carcinoma (ortholog); FOUND IN extracellular exosome (ortholog) NW_004955532 3627314 3631799 + 102025286 AGCD01070292;GBCE01096162;GBDI01083282;XM_005410340 XP_005410397 MODEL 8769505 protein-coding Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ENCODES a protein that exhibits enzyme binding (ortholog); histone pre-mRNA DCP binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955455 8021946 8045325 + 102004141 AGCD01045870;GBDF01081549;XM_005396392 XP_005396449 MODEL 8862020 protein-coding Fgd6 FYVE, RhoGEF and PH domain containing 6 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955405 31700706 31801992 - 102004554 AGCD01005303;AGCD01005304;AGCD01005305;GBDK01361830;XM_005374483;XM_013518446;XR_001235695 XP_005374540;XP_013373900 MODEL 8849954 protein-coding Sesn2 sestrin 2 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); L-leucine binding (ortholog); peroxidase activity (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytoplasm (ortholog); GATOR2 complex (ortholog) NW_004955452 7392644 7417204 + 102014203 AGCD01044151;AGCD01044152;AGCD01044153;AGCD01044154;GBBH01131789;GBDF01160814;XM_005394946 XP_005395003 MODEL 8797314 protein-coding Epb41l2 erythrocyte membrane protein band 4.1 like 2 ENCODES a protein that exhibits PH domain binding (ortholog); spectrin binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); COP9 signalosome (ortholog) NW_004955436 11650584 11805822 - 102030344 AGCD01033818;AGCD01033819;AGCD01033820;GBBH01093601;XM_013516681 XP_013372135 MODEL 8738120 protein-coding LOC102013195 ankyrin repeat domain-containing protein 26-like NW_004955429 20924084 20973447 - 102013195 AGCD01028992;AGCD01028993;GBDF01158703;GBDF01251273;XM_013515561;XR_001234544;XR_001234545 XP_013371015 MODEL 9041321 protein-coding Rps3a ribosomal protein S3A ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of fibroblast proliferation (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955471 5705829 5710683 + 102022590 AGCD01053112;GBDF01007744;XM_005400892 XP_005400949 MODEL 8860724 protein-coding LOC102008468 vomeronasal type-2 receptor 116-like NW_004955563 153803 168288 + 102008468 AGCD01074047;AGCD01074048;AGCD01074049;XM_005413196 XP_005413253 MODEL 8700366 protein-coding LOC102008833 olfactory receptor 1F12 NW_004955465 13529663 13530604 + 102008833 AGCD01050613;XM_005398956 XP_005399013 MODEL 8816470 protein-coding Cep192 centrosomal protein 192 ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN centrosome-templated microtubule nucleation (ortholog); mitotic spindle assembly (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955402 604605 675179 - 102007714 AGCD01000028;GBDI01256968;XM_013512709;XM_013512751;XM_013512786;XM_013512821;XM_013512845;XM_013512868;XM_013512886 XP_013368163;XP_013368205;XP_013368240;XP_013368275;XP_013368299;XP_013368322;XP_013368340 MODEL 8836104 ncrna LOC102008088 uncharacterized LOC102008088 NW_004955415 25886988 25916316 - 102008088 AGCD01016587;GBBH01171947;XR_260315 MODEL 39132237 rrna 5S_rRNA 5S ribosomal RNA 8710326 ncrna LOC102003998 uncharacterized LOC102003998 NW_004955433 12835847 12849596 + 102003998 AGCD01031671;GBDF01156740;XR_261588 MODEL 8793056 protein-coding Ankrd11 ankyrin repeat domain containing 11 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone development (ortholog); cardiac neural crest cell differentiation involved in heart development (ortholog); cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); anemia (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955541 2921230 3033612 - 102008570 AGCD01071433;GBCB01040226;GBDF01157743;XM_005411033 XP_005411090 MODEL 8821769 protein-coding LOC102005821 transcription elongation factor A protein-like 3 NW_004955503 8192530 8194504 + 102005821 AGCD01064812;GBDI01313611;XM_005406978 XP_005407035 MODEL 10186638 ncrna LOC106150319 uncharacterized LOC106150319 NW_004955471 6220344 6222359 - 106150319 AGCD01053122;GBDI01190702;XR_001237054 MODEL 39133706 misc_rna 7SK 7SK RNA 8971667 ncrna LOC102010804 uncharacterized LOC102010804 NW_004955417 3968290 4005083 + 102010804 AGCD01017933;AGCD01017934;GBCB01092654;XR_001233425;XR_001233426;XR_001233427;XR_001233428;XR_001233429 MODEL 39131428 protein-coding CD164 CD164 molecule 8763673 pseudo LOC102013943 ubiquitin-protein ligase E3A-like NW_004955422 14030769 14050042 - 102013943 AGCD01022846;AGCD01022847;XR_260935 MODEL 8927694 protein-coding Plcxd2 phosphatidylinositol specific phospholipase C X domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955427 12094403 12143557 + 102021373 AGCD01027203;AGCD01027204;GBDF01277030;XM_005386368;XM_005386369;XM_013515219 XP_005386425;XP_005386426;XP_013370673 MODEL 8932846 protein-coding Ciz1 CDKN1A interacting zinc finger protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); positive regulation of DNA-templated DNA replication initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955570 716124 732551 - 102021494 AGCD01074760;AGCD01074761;GBDF01007463;GBDF01007479;XM_013509385 XP_013364839 MODEL 730469061 misc_rna DLEU1_1 Deleted in lymphocytic leukemia 1 conserved region 1 8779963 pseudo LOC102011593 tripartite motif-containing protein 44 pseudogene NW_004955441 5319595 5320576 + 102011593 AGCD01036876 MODEL 8785126 protein-coding CUNH3orf70 chromosome unknown C3orf70 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955420 22426369 22493624 + 102014570 AGCD01021199;AGCD01021200;AGCD01021201;GBBH01126853;GBDI01223181;XM_005383303 XP_005383360 MODEL 9056945 protein-coding Atp6ap1l ATPase H+ transporting accessory protein 1 like ASSOCIATED WITH Breast Neoplasms (ortholog) NW_004955418 28077388 28106183 - 102005143 AGCD01019427;AGCD01019428;GBCQ01152832;GBCQ01152833;XM_013513053;XM_013513055;XM_013513056;XM_013513057;XM_013513058;XM_013513059 XP_013368507;XP_013368509;XP_013368510;XP_013368511;XP_013368512;XP_013368513 MODEL 8769859 protein-coding Prdm5 PR/SET domain 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitotic cell cycle (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH brittle cornea syndrome 1 (ortholog); brittle cornea syndrome 2 (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955428 19684721 19881716 + 102019418 AGCD01028095;AGCD01028096;AGCD01028097;AGCD01028098;GBCQ01020388;XM_013515254 XP_013370708 MODEL 39134143 misc_rna 7SK 7SK RNA 8798168 ncrna LOC102004751 uncharacterized LOC102004751 NW_004955437 17871916 17891241 + 102004751 AGCD01034762;GBCQ01090089;XR_001235033;XR_001235034;XR_001235035;XR_261887;XR_261889 MODEL 8729035 protein-coding Rbm27 RNA binding motif protein 27 NW_004955415 7829022 7901617 - 102016698 AGCD01016058;GBDI01261789;XM_005380675;XM_005380676;XM_005380677;XM_005380678 XP_005380732;XP_005380733;XP_005380734;XP_005380735 MODEL 8788052 pseudo LOC102022288 28S ribosomal protein S36, mitochondrial pseudogene NW_004955480 8492496 8493186 - 102022288 AGCD01056725 MODEL 9006941 protein-coding Trip10 thyroid hormone receptor interactor 10 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955495 2770449 2780650 - 102005157 AGCD01061799;GBCE01028494;XM_005405695;XM_005405697 XP_005405752;XP_005405754 MODEL 39131999 rrna 5S_rRNA 5S ribosomal RNA 8761523 pseudo LOC102018191 elongation factor 1-alpha 1-like NW_004955487 4175137 4176506 - 102018191 AGCD01059300 MODEL 39134295 misc_rna 7SK 7SK RNA 9001610 protein-coding Casz1 castor zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of amacrine cell differentiation (ortholog); negative regulation of cell differentiation (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) NW_004955486 2923239 2975835 + 102014052 AGCD01059013;GBBH01003788;GBDK01282114;XM_013504268;XM_013504270 XP_013359722;XP_013359724 MODEL 8815259 protein-coding Cdh6 cadherin 6 INVOLVED IN female gonad development (ortholog); Notch signaling pathway (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH Cachexia (ortholog); clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cell junction (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955426 17187191 17316730 + 102018950 AGCD01026499;AGCD01026500;AGCD01026501;GBCE01162956;XM_005386145;XM_013515003;XM_013515004;XM_013515005 XP_005386202;XP_013370457;XP_013370458;XP_013370459 MODEL 9051062 protein-coding Adsl adenylosuccinate lyase ENCODES a protein that exhibits (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (ortholog); identical protein binding (ortholog); N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenylosuccinase lyase deficiency (ortholog); Ataxia (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955413 26067463 26084669 + 102007645 AGCD01014422;GBCB01011117;XM_005379310;XM_005379312;XM_013511421 XP_005379367;XP_005379369;XP_013366875 MODEL 8870975 protein-coding Sesn3 sestrin 3 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); GATOR2 complex (ortholog); TORC2 complex (ortholog) NW_004955412 100335 125395 - 102027390 AGCD01012481;GBBH01141125;GBDF01041588;XM_013511114 XP_013366568 MODEL 8840490 protein-coding Aph1b aph-1B gamma-secretase subunit ENCODES a protein that exhibits endopeptidase activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); locomotory behavior (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN gamma-secretase complex (ortholog); membrane (ortholog); transport vesicle (ortholog) NW_004955450 12000682 12022183 - 102027596 AGCD01042686;GBDF01044997;XM_005393791;XM_013518982;XM_013518983 XP_005393848;XP_013374436;XP_013374437 MODEL 8860096 pseudo LOC102009590 major facilitator superfamily domain-containing protein 8-like NW_004955467 9964828 9982343 - 102009590 AGCD01051537;AGCD01051538 MODEL 9035917 pseudo LOC102004389 atlastin-2-like NW_004955482 7328108 7330635 + 102004389 AGCD01057455;AGCD01057456 MODEL 8749502 protein-coding Vwde von Willebrand factor D and EGF domains ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955432 18687192 18752679 - 102003368 AGCD01031157;AGCD01031158;AGCD01031159;XM_005388152 XP_005388209 MODEL 9024104 pseudo LOC102012006 RWD domain-containing protein 1-like NW_004955502 2548815 2559921 - 102012006 AGCD01064301 MODEL 8957875 protein-coding LOC102008838 V-set and immunoglobulin domain-containing protein 8 NW_004955468 11648880 11658624 - 102008838 AGCD01052136;GBDK01042318;XM_005400177;XM_005400178 XP_005400234;XP_005400235 MODEL 8850626 ncrna LOC102006910 uncharacterized LOC102006910 NW_004955417 25248421 25254129 - 102006910 AGCD01018475;XR_260493 MODEL 8799190 protein-coding LOC102013596 olfactory receptor 10A3 NW_004955414 23775674 23776654 - 102013596 AGCD01015522;XM_005380207 XP_005380264 MODEL 39134012 misc_rna 7SK 7SK RNA 8838746 protein-coding Bivm basic, immunoglobulin-like variable motif containing FOUND IN nucleoplasm (ortholog) NW_004955404 8327295 8358453 - 102028925 AGCD01003350;AGCD01003351;GBDI01324218;XM_005374026;XM_005374027;XM_013515915 XP_005374083;XP_005374084;XP_013371369 MODEL 8826937 protein-coding Ankrd12 ankyrin repeat domain 12 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955402 2705252 2799682 - 102025636 AGCD01000088;AGCD01000089;AGCD01000090;GBBH01165639;XM_005372604;XM_005372606;XM_013515845;XM_013515902 XP_005372661;XP_005372663;XP_013371299;XP_013371356 MODEL 8977477 protein-coding LOC102007292 uncharacterized protein C15orf26-like NW_004956049 3925 6331 - 102007292 AGCD01078945;GBBH01031873;GBDJ01352435;XM_013510219 XP_013365673 MODEL 9026733 protein-coding Ik IK cytokine ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); mitotic spindle pole (ortholog); nuclear chromosome (ortholog) NW_004955418 39695 52862 - 102028750 AGCD01018664;AGCD01018665;GBBH01033048;XM_005382016 XP_005382073 MODEL 8811239 ncrna LOC102010807 uncharacterized LOC102010807 NW_004955419 24809478 24811822 + 102010807 AGCD01020356;GBCE01047588;XR_001233558;XR_260656 MODEL 9011252 protein-coding Ablim1 actin binding LIM protein 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN axon guidance (ortholog); cilium assembly (ortholog); lamellipodium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); lamellipodium (ortholog); postsynaptic density (ortholog) NW_004955431 19397136 19684574 - 102017805 AGCD01030448;AGCD01030449;AGCD01030450;AGCD01030451;AGCD01030452;GBCE01077697;XM_005387831;XM_005387832;XM_005387833;XM_005387834;XM_005387836;XM_005387838;XM_013515782;XM_013515783;XM_013515784;XM_013515785;XM_013515786;XM_013515787;XM_013515788;XM_013515789;XM_013515790;XM_013515791 XP_005387888;XP_005387889;XP_005387890;XP_005387891;XP_005387893;XP_005387895;XP_013371236;XP_013371237;XP_013371238;XP_013371239;XP_013371240;XP_013371241;XP_013371242;XP_013371243;XP_013371244;XP_013371245 MODEL 8930334 protein-coding Fgf1 fibroblast growth factor 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN branch elongation involved in ureteric bud branching (ortholog); cellular response to heat (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); cleft lip (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955415 11151330 11245554 + 102024452 AGCD01016150;AGCD01016151;AGCD01016152;AGCD01016153;AGCD01016154;GBBH01223382;XM_005380699;XM_005380701;XM_005380702;XM_005380703;XM_005380707;XM_013512345;XM_013512346;XM_013512347;XM_013512348 XP_005380756;XP_005380758;XP_005380759;XP_005380760;XP_005380764;XP_013367799;XP_013367800;XP_013367801;XP_013367802 MODEL 8709801 protein-coding LOC102008469 protein FAM209B NW_004955445 2725178 2727984 - 102008469 AGCD01039364;GBDJ01263846;XM_005392264 XP_005392321 MODEL 8869620 protein-coding Rps4x ribosomal protein S4 X-linked ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of translation (ortholog); response to ethanol (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosolic ribosome (ortholog) NW_004955475 11656537 11661803 - 102013408 AGCD01055163;GBDI01007205;XM_005401686 XP_005401743 MODEL 39132238 rrna 5S_rRNA 5S ribosomal RNA 8700662 protein-coding Aldh16a1 aldehyde dehydrogenase 16 family member A1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955559 1376862 1390861 - 102016644 AGCD01073641;AGCD01073642;GBCQ01035042;XM_005412882;XM_013509018 XP_005412939;XP_013364472 MODEL 8863145 protein-coding LOC102008089 cystatin-C-like NW_004955415 30698518 30701160 + 102008089 AGCD01016666;GBDJ01009478;XM_005380979 XP_005381036 MODEL 8792890 pseudo LOC102004004 ATPase inhibitor, mitochondrial pseudogene NW_004955533 1286264 1287849 - 102004004 AGCD01070353 MODEL 8975423 protein-coding Acy3 aminoacylase 3 ENCODES a protein that exhibits aminoacylase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lymphoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955422 17852295 17856946 + 102010063 AGCD01022932;GBCQ01010215;XM_005384297;XM_005384298 XP_005384354;XP_005384355 MODEL 9052001 protein-coding LOC102009995 CMRF35-like molecule 6 NW_004955553 1453306 1458327 + 102009995 AGCD01072882;GBDK01277584;XM_005412239 XP_005412296 MODEL 8905600 protein-coding Epb41l3 erythrocyte membrane protein band 4.1 like 3 INVOLVED IN axon development (ortholog); myelin maintenance (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN axolemma (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955402 5459586 5674745 + 102005981 AGCD01000136;AGCD01000137;GBDF01004195;XM_005372623;XM_005372625;XM_005372626;XM_005372627;XM_005372629;XM_005372630;XM_013516834;XM_013516878;XM_013516964;XM_013517037;XM_013517088;XM_013517123;XM_013517195;XM_013517228;XM_013517264;XM_013517295;XM_013517317;XM_013517351;XM_013517381;XM_013517413;XM_013517440 XP_005372680;XP_005372682;XP_005372683;XP_005372684;XP_005372686;XP_005372687;XP_013372288;XP_013372332;XP_013372418;XP_013372491;XP_013372542;XP_013372577;XP_013372649;XP_013372682;XP_013372718;XP_013372749;XP_013372771;XP_013372805;XP_013372835;XP_013372867;XP_013372894 MODEL 8739446 protein-coding Asf1b anti-silencing function 1B histone chaperone ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); DNA replication-dependent chromatin assembly (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); castration-resistant prostate carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 32818592 32828651 - 102011307 AGCD01016735;GBDF01005758;XM_005381087 XP_005381144 MODEL 8845227 protein-coding Trip11 thyroid hormone receptor interactor 11 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); chondrocyte differentiation involved in endochondral bone morphogenesis (ortholog); ASSOCIATED WITH achondrogenesis type IA (ortholog); acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); FOUND IN acrosomal membrane (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955438 14327400 14394022 - 102022016 AGCD01035343;AGCD01035344;AGCD01035345;GBDK01231119;XM_013517219 XP_013372673 MODEL 39132000 rrna 5S_rRNA 5S ribosomal RNA 8748095 protein-coding Slc2a13 solute carrier family 2 member 13 ENCODES a protein that exhibits ATPase binding (ortholog); myo-inositol transmembrane transporter activity (ortholog); myo-inositol:proton symporter activity (ortholog); INVOLVED IN myo-inositol transport (ortholog); positive regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN astrocyte end-foot (ortholog); bounding membrane of organelle (ortholog); cell body (ortholog) NW_004955505 395380 664272 + 102003159 AGCD01064957;AGCD01064958;AGCD01064959;AGCD01064960;AGCD01064961;GBDK01214301;XM_013505919 XP_013361373 MODEL 8760364 protein-coding Btbd7 BTB domain containing 7 INVOLVED IN regulation of branching involved in salivary gland morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955438 15345678 15445705 - 102004643 AGCD01035365;AGCD01035366;AGCD01035367;GBCB01121971;XM_005390344;XM_013517216;XM_013517217;XM_013517218 XP_005390401;XP_013372670;XP_013372671;XP_013372672 MODEL 8909982 protein-coding Cd164 CD164 molecule INVOLVED IN cell adhesion (ortholog); heterophilic cell-cell adhesion (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 66 (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog); plasma membrane (ortholog) NW_004955411 34423727 34439295 - 102023883 AGCD01012399;GBBH01000455;XM_013510816 XP_013366270 MODEL 9037750 protein-coding Snrpe small nuclear ribonucleoprotein polypeptide E ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955406 39725841 39732527 + 102016018 AGCD01006633;GBDJ01075700;XM_005375279 XP_005375336 MODEL 8920125 protein-coding Plcxd3 phosphatidylinositol specific phospholipase C X domain containing 3 ASSOCIATED WITH cervical cancer (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955426 25563222 25719939 - 102026768 AGCD01026723;AGCD01026724;AGCD01026725;AGCD01026726;AGCD01026727;AGCD01026728;GBCQ01014740;XM_005386247 XP_005386304 MODEL 8922983 protein-coding Cat catalase ENCODES a protein that exhibits aminoacylase activity (ortholog); antioxidant activity (ortholog); catalase activity (ortholog); INVOLVED IN response to auditory stimulus; aerobic respiration (ortholog); cellular detoxification of hydrogen peroxide (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; tryptophan metabolic pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acatalasia (ortholog); acne (ortholog); FOUND IN catalase complex (ortholog); extracellular region (ortholog); peroxisomal matrix (ortholog) NW_004955422 11783973 11826970 - 102017674 AGCD01022765;AGCD01022766;AGCD01022767;AGCD01022768;GBDI01005261;XM_005384146 XP_005384203 MODEL 8835937 protein-coding Asgr1 asialoglycoprotein receptor 1 ENCODES a protein that exhibits asialoglycoprotein receptor activity (ortholog); identical protein binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN receptor-mediated endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955467 9728918 9732548 + 102003641 AGCD01051522;GBDI01306066;XM_005399560 XP_005399617 MODEL 8870419 ncrna LOC102011598 uncharacterized LOC102011598 NW_004955567 1211454 1212041 + 102011598 AGCD01074462;GBDF01038351;XR_265029 MODEL 8745906 protein-coding Api5 apoptosis inhibitor 5 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of fibroblast apoptotic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955422 4121913 4149242 - 102026756 AGCD01022533;AGCD01022534;GBDF01003742;XM_005384088;XM_005384089 XP_005384145;XP_005384146 MODEL 8713851 protein-coding Atp6ap2 ATPase H+ transporting accessory protein 2 INVOLVED IN angiotensin maturation (ortholog); central nervous system maturation (ortholog); eye pigmentation (ortholog); PARTICIPATES IN renin-angiotensin cascade pathway; ASSOCIATED WITH congenital disorder of glycosylation type IIr (ortholog); Craniofacial Abnormalities (ortholog); Fibrosis (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955565 2006154 2029921 - 102005522 AGCD01074337;AGCD01074338;AGCD01074339;GBCQ01011649;XM_005413271 XP_005413328 MODEL 8863825 protein-coding LOC102004761 eukaryotic translation initiation factor 1A, X-chromosomal-like NW_004955446 18926932 18928944 - 102004761 AGCD01040418;GBBH01096072;XM_013518447 XP_013373901 MODEL 8817270 protein-coding LOC102008841 calcyclin-binding protein-like NW_004955414 6441386 6442088 - 102008841 AGCD01014919;XM_013512070 XP_013367524 MODEL 8964667 protein-coding Prdm8 PR/SET domain 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN central nervous system projection neuron axonogenesis (ortholog); corpus callosum morphogenesis (ortholog); corticospinal tract morphogenesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH COVID-19 (ortholog); progressive myoclonus epilepsy (ortholog); progressive myoclonus epilepsy 10 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 4443339 4463687 + 102007461 AGCD01031464;AGCD01031465;AGCD01031466;AGCD01031467;AGCD01031468;GBBH01191689;XM_005388496 XP_005388553 MODEL 8730478 protein-coding Rbm28 RNA binding motif protein 28 PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia, neurologic defects, and endocrinopathy syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleolus (ortholog) NW_004955479 9319132 9350261 - 102025576 AGCD01056458;AGCD01056459;AGCD01056460;GBBH01198087;GBDK01360890;XM_013503290 XP_013358744 MODEL 8802022 pseudo LOC102005826 cyclin-dependent kinase 11B pseudogene NW_004955511 3584330 3587487 - 102005826 AGCD01066468 MODEL 8918715 protein-coding LOC102002983 uncharacterized LOC102002983 NW_004955403 53058177 53060011 - 102002983 AGCD01003030;GBDF01004642;GBDF01223597;XM_013514571 XP_013370025 MODEL 39133709 misc_rna 7SK 7SK RNA 8906378 pseudo LOC102009996 cytochrome P450 2B4-like NW_004955555 49910 64514 - 102009996 AGCD01073023 MODEL 8796262 pseudo LOC102013947 protein-lysine N-methyltransferase Mettl10 pseudogene NW_004955424 28152797 28154395 + 102013947 AGCD01025147 MODEL 8952189 protein-coding LOC102013196 olfactory receptor 5AK2-like NW_004955511 2103315 2104244 + 102013196 AGCD01066391;XM_005407983 XP_005408040 MODEL 8805867 ncrna LOC102018192 uncharacterized LOC102018192 NW_004955491 8497950 8499449 - 102018192 AGCD01060616;GBDF01057299;XR_264041;XR_264042 MODEL 730469566 misc_rna DLEU2_1 Deleted in lymphocytic leukemia 2 conserved region 1 8937504 protein-coding Ckap2 cytoskeleton associated protein 2 INVOLVED IN microtubule polymerization (ortholog); mitotic cytokinesis (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955431 5416596 5429465 - 102010613 AGCD01030028;AGCD01030029;GBDF01008509;GBDI01161937;XM_013515726 XP_013371180 MODEL 8784756 protein-coding Cep20 centrosomal protein 20 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Thoracic Aortic Aneurysm 4 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955442 650033 665540 - 102027462 AGCD01037427;GBBH01141057;XM_005391079;XM_013517977 XP_005391136;XP_013373431 MODEL 8828733 protein-coding LOC102009596 natural cytotoxicity triggering receptor 3 ligand 1-like NW_004955414 32190761 32204203 + 102009596 AGCD01015777;GBBH01134981;XM_005380382;XM_005380383;XM_013512027 XP_005380439;XP_005380440;XP_013367481 MODEL 8799862 protein-coding Cd164l2 CD164 molecule like 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004956163 1090 5032 - 102010439 AGCD01079162;GBDJ01298212;XM_005415173;XM_005415174;XM_013510222 XP_005415230;XP_005415231;XP_013365676 MODEL 9014895 protein-coding Sestd1 SEC14 and spectrin domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN calcium channel complex (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955403 17761404 17835528 + 102023421 AGCD01002086;AGCD01002087;GBDK01231007;XM_005373365;XM_005373367;XM_013512590 XP_005373422;XP_005373424;XP_013368044 MODEL 39134144 misc_rna 7SK 7SK RNA 8753187 protein-coding CUNH4orf17 chromosome unknown C4orf17 homolog ASSOCIATED WITH esophageal cancer (ortholog); sarcoma (ortholog); thymoma (ortholog) NW_004955496 8047756 8068982 - 102024357 AGCD01062388;GBDI01110530;XM_005406272 XP_005406329 MODEL 9062973 ncrna LOC102012008 uncharacterized LOC102012008 NW_004955506 888972 890923 + 102012008 AGCD01065239;GBDF01266491;XR_264312 MODEL 8972184 protein-coding LOC102006911 zinc finger protein 14-like NW_004955417 31668874 31705932 - 102006911 AGCD01018660;AGCD01018661;AGCD01018662;GBCE01006196;XM_005381977;XM_013512776 XP_005382034;XP_013368230 MODEL 8737484 pseudo LOC102004015 N-formyl peptide receptor 2-like NW_004955558 701686 702721 - 102004015 AGCD01073385 MODEL 9024430 protein-coding Bkgd beta-keto-L-gulonate decarboxylase ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); zinc ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); regulation of DNA repair (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955414 780009 809016 - 102023894 AGCD01014746;AGCD01014747;AGCD01014748;AGCD01014749;GBCQ01000810;XM_005379702;XM_005379703;XM_005379704;XM_013511833 XP_005379759;XP_005379760;XP_005379761;XP_013367287 MODEL 9044466 pseudo LOC102013597 prefoldin subunit 4 pseudogene NW_004955471 2445173 2445577 - 102013597 AGCD01053009 MODEL 9003980 protein-coding Epb41l4a erythrocyte membrane protein band 4.1 like 4A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955418 2876345 3097365 + 102013606 AGCD01018777;AGCD01018778;AGCD01018779;GBCQ01099747;GBDF01195481;XM_005382155;XM_005382156;XM_005382157;XM_013513019 XP_005382212;XP_005382213;XP_005382214;XP_013368473 MODEL 39134297 misc_rna 7SK 7SK RNA 9043707 ncrna LOC102007293 uncharacterized LOC102007293 NW_004955404 27234470 27303032 - 102007293 AGCD01003918;AGCD01003919;AGCD01003920;AGCD01003921;AGCD01003922;GBDF01074909;XR_259322 MODEL 8740841 pseudo LOC102005827 60S ribosomal protein L6-like NW_004955430 3987198 3988065 - 102005827 AGCD01029239;XR_261416 MODEL 8702610 ncrna LOC102022290 uncharacterized LOC102022290 NW_004955418 7276604 7378661 + 102022290 AGCD01018886;AGCD01018887;AGCD01018888;AGCD01018889;AGCD01018890;GBDF01261954;XR_260543 MODEL 8734597 protein-coding Slc2a2 solute carrier family 2 member 2 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); INVOLVED IN carbohydrate utilization (ortholog); cellular response to fatty acid (ortholog); D-glucose transmembrane transport (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; Fanconi syndrome pathway; forkhead class A signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); diabetes mellitus (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border (ortholog) NW_004955420 1101769 1129672 - 102025012 AGCD01020568;XM_005382995 XP_005383052 MODEL 8795955 protein-coding Fgf10 fibroblast growth factor 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ formation (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); aplasia of lacrimal and salivary glands (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955446 18163117 18244840 + 102029240 AGCD01040396;GBDF01112025;XM_005392731 XP_005392788 MODEL 8953515 protein-coding LOC102008473 zinc finger protein OZF-like NW_004955569 1649162 1664829 + 102008473 AGCD01074673;AGCD01074674;GBDJ01263726;XM_013509377 XP_013364831 MODEL 8995399 protein-coding Cdh7 cadherin 7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colorectal Neoplasms (ortholog); esophageal cancer (ortholog) NW_004955402 49444814 49568653 + 102028483 AGCD01001229;AGCD01001230;AGCD01001231;GBCQ01181567;XM_005373040 XP_005373097 MODEL 8893488 protein-coding Catip ciliogenesis associated TTC17 interacting protein INVOLVED IN actin filament polymerization (ortholog); cilium organization (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); spermatogenic failure 54 (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955453 15008225 15015030 - 102011837 AGCD01044880;GBBH01031850;XM_005395652 XP_005395709 MODEL 39132239 rrna 5S_rRNA 5S ribosomal RNA 8800539 protein-coding Ash1l ASH1 like histone lysine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); INVOLVED IN decidualization (ortholog); flagellated sperm motility (ortholog); negative regulation of acute inflammatory response (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Anorectal Malformations (ortholog); anxiety disorder (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 1778905 1950656 - 102010735 AGCD01071870;AGCD01071871;AGCD01071872;AGCD01071873;AGCD01071874;AGCD01071875;AGCD01071876;GBDJ01187710;XM_013508234;XM_013508235;XM_013508236 XP_013363688;XP_013363689;XP_013363690 MODEL 8986054 pseudo LOC102008093 calcium-binding protein 39 pseudogene NW_004955476 5340462 5341052 + 102008093 AGCD01055302 MODEL 39134013 misc_rna 7SK 7SK RNA 8803053 protein-coding Atp6v0a1 ATPase H+ transporting V0 subunit a1 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN regulation of macroautophagy (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Deglutition Disorders (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog); membrane (ortholog) NW_004955451 16396287 16442596 + 102018250 AGCD01043675;AGCD01043676;GBCB01020461;GBDF01050271;XM_005394459 XP_005394516 MODEL 10236592 ncrna LOC106150320 uncharacterized LOC106150320 NW_004955471 7628393 7631354 - 106150320 AGCD01053157;GBDF01249699;XR_001237055 MODEL 9054230 protein-coding Aldh18a1 aldehyde dehydrogenase 18 family member A1 ENCODES a protein that exhibits delta1-pyrroline-5-carboxylate synthetase (NADP+) activity (ortholog); glutamate 5-kinase activity (ortholog); glutamate-5-semialdehyde dehydrogenase (NADP+) activity (ortholog); INVOLVED IN glutamate metabolic process (ortholog); L-citrulline biosynthetic process (ortholog); L-glutamate catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); asthma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955507 1892087 1946526 - 102009637 AGCD01065573;AGCD01065574;AGCD01065575;GBDJ01272098;XM_005407547;XM_005407548;XM_013506238 XP_005407604;XP_005407605;XP_013361692 MODEL 8758232 protein-coding Acyp1 acylphosphatase 1 PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955523 499508 507809 + 102013963 AGCD01068460;GBDJ01387062;XM_005409377 XP_005409434 MODEL 8737056 protein-coding LOC102004392 potassium voltage-gated channel subfamily F member 1 NW_004955487 5780814 5785142 + 102004392 AGCD01059346;GBDJ01337648;XM_005404421 XP_005404478 MODEL 8893826 protein-coding Ankrd13a ankyrin repeat domain 13A ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of protein localization to endosome (ortholog); negative regulation of receptor internalization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); late endosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955455 8576406 8610878 - 102014417 AGCD01045903;GBDK01182644;XM_005396429;XM_005396430 XP_005396486;XP_005396487 MODEL 39132001 rrna 5S_rRNA 5S ribosomal RNA 8967674 protein-coding Rbm3 RNA binding motif protein 3 ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); INVOLVED IN miRNA processing (ortholog); positive regulation of translation (ortholog); regulation of translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); large ribosomal subunit (ortholog) NW_004955543 166891 173987 + 102020843 AGCD01071562;GBDI01000015;XM_005411265;XM_005411266;XM_005411267 XP_005411322;XP_005411323;XP_005411324 MODEL 8852667 protein-coding Vwf von Willebrand factor ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); blood coagulation (ortholog); cell adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955413 3672470 3825588 - 102010886 AGCD01013578;AGCD01013579;AGCD01013580;AGCD01013581;AGCD01013582;AGCD01013583;AJ238385;GBDK01001413;XM_005378754;XM_005378755 CAB86185;XP_005378811;XP_005378812 MODEL 8844016 protein-coding Btbd9 BTB domain containing 9 INVOLVED IN adult locomotory behavior (ortholog); circadian behavior (ortholog); circadian sleep/wake cycle, non-REM sleep (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog) NW_004955437 4765234 5145033 + 102015147 AGCD01034370;AGCD01034371;AGCD01034372;AGCD01034373;AGCD01034374;AGCD01034375;AGCD01034376;AGCD01034377;AGCD01034378;GBDF01043958;XM_005390124;XM_013516988 XP_005390181;XP_013372442 MODEL 8713054 protein-coding Adss1 adenylosuccinate synthase 1 ENCODES a protein that exhibits actin filament binding (ortholog); adenylosuccinate synthase activity (ortholog); GTPase activity (ortholog); INVOLVED IN AMP biosynthetic process (ortholog); AMP salvage (ortholog); cellular response to electrical stimulus (ortholog); PARTICIPATES IN Canavan disease pathway; de novo purine biosynthetic pathway; ASSOCIATED WITH blepharospasm (ortholog); Breast Cancer, Familial (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog) NW_004955538 3179299 3196251 + 102026474 AGCD01071153;GBCB01005620;GBDJ01133679;XM_005410839;XM_013507879 XP_005410896;XP_013363333 MODEL 8966553 protein-coding Ablim2 actin binding LIM protein family member 2 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); myofibril (ortholog) NW_004955514 2800758 2920926 + 102011353 AGCD01067089;AGCD01067090;GBDJ01123377;XM_005408783;XM_005408784;XM_005408785;XM_005408786;XM_005408787;XM_005408789;XM_013506772;XM_013506773;XM_013506774;XM_013506775;XM_013506776;XM_013506778;XM_013506779;XM_013506780;XM_013506781;XM_013506782;XM_013506783 XP_005408840;XP_005408841;XP_005408842;XP_005408843;XP_005408844;XP_005408846;XP_013362226;XP_013362227;XP_013362228;XP_013362229;XP_013362230;XP_013362232;XP_013362233;XP_013362234;XP_013362235;XP_013362236;XP_013362237 MODEL 8840746 protein-coding Plcz1 phospholipase C zeta 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN calcium ion transport (ortholog); egg activation (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); spermatogenic failure 17 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955413 14791750 14846327 - 102011640 AGCD01014051;AGCD01014052;AGCD01014053;GBDF01083196;XM_005379040;XM_013511282;XR_001232940;XR_260080 XP_005379097;XP_013366736 MODEL 8800933 protein-coding Ckap2l cytoskeleton associated protein 2L INVOLVED IN cell division (ortholog); chromosome segregation (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Filippi syndrome (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); microtubule cytoskeleton (ortholog); mitotic spindle (ortholog) NW_004955470 1552279 1581261 + 102023579 AGCD01052647;AGCD01052648;GBCB01105157;GBDF01087147;XM_013522857 XP_013378311 MODEL 8976857 pseudo LOC102009597 mitochondrial fission factor-like NW_004955414 11395994 11396843 - 102009597 AGCD01015082 MODEL 8775434 protein-coding Set SET nuclear proto-oncogene INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 58 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955570 1104447 1117682 + 102025059 AGCD01074788;AGCD01074789;AGCD01074790;GBCC01015512;GBDF01047525;XM_013509410 XP_013364864 MODEL 8766177 pseudo LOC102004762 ADP-ribosylation factor-like protein 5A pseudogene NW_004955574 1088556 1089812 - 102004762 AGCD01075153 MODEL 8713802 protein-coding Prdx1 peroxiredoxin 1 ENCODES a protein that exhibits heme binding (ortholog); identical protein binding (ortholog); peroxidase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); erythrocyte homeostasis (ortholog); hydrogen peroxide catabolic process (ortholog); ASSOCIATED WITH asbestosis (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); mitochondrial matrix (ortholog) NW_004955464 12761390 12773413 + 102004364 AGCD01050224;AGCD01050225;AGCD01050226;AGCD01050227;AGCD01050228;GBCC01001560;GBCE01002844;XM_013521663 XP_013377117 MODEL 39134016 misc_rna 7SK 7SK RNA 8948794 protein-coding Ikbip IKBKB interacting protein INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); response to interleukin-1 (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); sarcoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955405 34600211 34619614 - 102015476 AGCD01005380;GBDK01395326;XM_005374509;XM_005374510 XP_005374566;XP_005374567 MODEL 8868938 ncrna LOC102013950 uncharacterized LOC102013950 NW_004955426 6661147 6672152 + 102013950 AGCD01026162;AGCD01026163;GBDF01123929;XR_261194 MODEL 8893952 ncrna LOC102018193 uncharacterized LOC102018193 NW_004955492 8662680 8668236 + 102018193 AGCD01060823;GBCB01028339;XR_264060 MODEL 8844557 protein-coding Epb41l4b erythrocyte membrane protein band 4.1 like 4B INVOLVED IN actomyosin structure organization (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog) NW_004955419 17686096 17821884 + 102003658 AGCD01020161;AGCD01020162;AGCD01020163;AGCD01020164;GBCE01117906;GBCE01117907;XM_013513219;XM_013513220 XP_013368673;XP_013368674 MODEL 8766720 protein-coding Trip12 thyroid hormone receptor interactor 12 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); heterochromatin boundary formation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955453 5132776 5272250 + 102029932 AGCD01044705;AGCD01044706;GBDF01007218;XM_005395422;XM_005395424;XM_005395425;XM_005395426;XM_005395427;XM_005395428;XM_005395429;XM_005395430;XM_013519820;XM_013519821;XM_013519822 XP_005395479;XP_005395481;XP_005395482;XP_005395483;XP_005395484;XP_005395485;XP_005395486;XP_005395487;XP_013375274;XP_013375275;XP_013375276 MODEL 8895551 protein-coding Cep250 centrosomal protein 250 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); cilium assembly (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955422 25932377 25978524 - 102011674 AGCD01023273;GBDF01281795;XM_013514236;XM_013514237;XM_013514238 XP_013369690;XP_013369691;XP_013369692 MODEL 8935783 protein-coding Cd177 CD177 molecule ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); integrin binding (ortholog); protease binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell-cell adhesion (ortholog); cell-cell junction maintenance (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955555 1106722 1120756 + 102013974 AGCD01073058;GBBH01099260;XM_005412434;XM_013508720;XM_013508721 XP_005412491;XP_013364174;XP_013364175 MODEL 8836659 protein-coding LOC102012009 ferritin-1 heavy chain-like NW_004955427 216126 219395 - 102012009 AGCD01026814;XM_005386602 XP_005386659 MODEL 8866244 protein-coding LOC102006914 olfactory receptor 1N2-like NW_004955419 5391871 5392860 + 102006914 AGCD01019805;XM_005382526 XP_005382583 MODEL 8716519 pseudo LOC102002984 60S ribosomal protein L8 pseudogene NW_004955403 16745732 16746501 + 102002984 AGCD01002067 MODEL 8861288 ncrna LOC102004017 uncharacterized LOC102004017 NW_004955444 18696740 18734262 + 102004017 AGCD01039250;AGCD01039251;AGCD01039252;GBBH01146836;XR_001235489;XR_262282 MODEL 8699697 pseudo LOC102010809 protein FAM161A pseudogene NW_004955419 28597487 28599260 - 102010809 AGCD01020469 MODEL 10154744 protein-coding LOC106150321 zinc finger protein ZFPM1-like NW_004955471 7026730 7029784 + 106150321 AGCD01053133;GBDF01192432;XM_013522904 XP_013378358 MODEL 8756803 protein-coding LOC102010001 seminal vesicle protein SVP-2-like NW_004955445 12108842 12114494 - 102010001 AGCD01039738;GBDK01186241;XM_005392441 XP_005392498 MODEL 9000164 ncrna LOC102013598 uncharacterized LOC102013598 NW_004955414 27677164 27679030 - 102013598 AGCD01015664;XR_260199 MODEL 8983855 protein-coding LOC102008843 olfactory receptor 52N4-like NW_004955414 21721245 21722210 + 102008843 AGCD01015429;XM_005380501 XP_005380558 MODEL 9042135 protein-coding Atp6v0a2 ATPase H+ transporting V0 subunit a2 ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive cutis laxa type IIA (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal vesicle (ortholog); endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955482 5311434 5337684 - 102026867 AGCD01057325;GBBH01063657;GBDI01120599;XM_013503544 XP_013358998 MODEL 8920297 pseudo LOC102007294 serine/threonine/tyrosine-interacting protein pseudogene NW_004955453 2624180 2624993 + 102007294 AGCD01044634 MODEL 39134301 misc_rna 7SK 7SK RNA 9012376 pseudo LOC102004394 60S ribosomal protein L36 pseudogene NW_004955491 6461282 6485923 + 102004394 AGCD01060532;AGCD01060533 MODEL 9063005 ncrna LOC102013197 uncharacterized LOC102013197 NW_004955430 2124248 2131815 - 102013197 AGCD01029152;AGCD01029153;GBCQ01086414;XR_261409 MODEL 8999547 protein-coding Rps5 ribosomal protein S5 ENCODES a protein that exhibits mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN regulation of translational fidelity (ortholog); ribosomal small subunit biogenesis (ortholog); translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955584 1036044 1040451 + 102013027 AGCD01075975;AGCD01075976;GBDJ01001008;XM_005414373 XP_005414430 MODEL 8829073 protein-coding Prdx2 peroxiredoxin 2 ENCODES a protein that exhibits antioxidant activity (ortholog); thioredoxin peroxidase activity (ortholog); thioredoxin-dependent peroxiredoxin activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); defense response to tumor cell (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); asbestosis (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955415 31880801 31884453 - 102023027 AGCD01016700;GBCE01003406;XM_005381032 XP_005381089 MODEL 8769186 protein-coding CUNH4orf36 chromosome unknown C4orf36 homolog ASSOCIATED WITH lung cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955474 2934400 2939999 + 102018385 AGCD01054314;GBDF01089496;XM_005401343 XP_005401400 MODEL 8808056 protein-coding Ankrd13b ankyrin repeat domain 13B ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); late endosome (ortholog) NW_004955481 3644332 3662375 - 102009498 AGCD01056909;AGCD01056910;GBBH01223904;GBDJ01273703;XM_005402675 XP_005402732 MODEL 8809835 ncrna LOC102011599 uncharacterized LOC102011599 NW_004955448 16625313 16631092 + 102011599 AGCD01041700;GBDF01305679;XR_001235757;XR_262473 MODEL 39134145 misc_rna 7SK 7SK RNA 8843144 pseudo LOC102013951 eukaryotic translation initiation factor 5 pseudogene NW_004955502 5595726 5597390 - 102013951 AGCD01064373 MODEL 8981697 protein-coding Fgf11 fibroblast growth factor 11 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); intellectual disability (ortholog) NW_004955467 9482467 9488992 - 102012941 AGCD01051513;GBDI01383783;XM_005399489;XM_013522234 XP_005399546;XP_013377688 MODEL 39132241 rrna 5S_rRNA 5S ribosomal RNA 8886346 ncrna LOC102008474 uncharacterized LOC102008474 NW_004955446 117396 131699 - 102008474 AGCD01039928;AGCD01039929;XR_262359 MODEL 8838524 protein-coding Ckap4 cytoskeleton associated protein 4 ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955405 40277082 40279486 - 102020196 AGCD01005510;GBCE01098483;GBDI01222143;XM_013519036 XP_013374490 MODEL 8716108 pseudo LOC102008096 60S ribosomal protein L6-like NW_004955477 11186663 11187511 - 102008096 AGCD01055719 MODEL 730469401 misc_rna DLEU2_3 Deleted in lymphocytic leukemia 2 conserved region 3 39133712 misc_rna 7SK 7SK RNA 9016598 protein-coding Apip APAF1 interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); methylthioribulose 1-phosphate dehydratase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN L-methionine cycle (ortholog); negative regulation of apoptotic process (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 11405721 11426700 + 102013838 AGCD01022755;GBCQ01094751;XM_005384139 XP_005384196 MODEL 8729716 protein-coding Cdh8 cadherin 8 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); regulation of synapse organization (ortholog); response to cold (ortholog); ASSOCIATED WITH brain edema (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); synaptic cleft (ortholog) NW_004955433 18737715 19094202 - 102017266 AGCD01031855;AGCD01031856;AGCD01031857;AGCD01031858;AGCD01031859;GBCE01178021;XM_005388456;XM_005388457;XM_005388458 XP_005388513;XP_005388514;XP_005388515 MODEL 8869665 protein-coding Ash2l ASH2 like, histone lysine methyltransferase complex subunit ENCODES a protein that exhibits beta-catenin binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN euchromatin (ortholog); histone methyltransferase complex (ortholog); MLL1 complex (ortholog) NW_004955463 13731651 13757475 + 102015818 AGCD01049885;AGCD01049886;GBCE01054486;XM_005398423;XM_005398424;XM_005398425;XM_005398426;XM_005398428;XM_005398429 XP_005398480;XP_005398481;XP_005398482;XP_005398483;XP_005398485;XP_005398486 MODEL 9016002 ncrna LOC102005831 uncharacterized LOC102005831 NW_004955514 2457669 2462790 + 102005831 AGCD01067082;GBDF01145712;XR_264496 MODEL 39132002 rrna 5S_rRNA 5S ribosomal RNA 8845261 protein-coding LOC102022294 eukaryotic translation initiation factor 4B-like NW_004955483 1130768 1143285 - 102022294 AGCD01057644;GBDJ01001048;XM_005403314;XM_005403316;XM_013503771 XP_005403371;XP_005403373;XP_013359225 MODEL 8916280 protein-coding Blcap BLCAP apoptosis inducing factor INVOLVED IN apoptotic nuclear changes (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog) NW_004955445 19116945 19127469 + 102018038 AGCD01039911;GBDF01089233;XM_005392557;XR_001235621 XP_005392614 MODEL 8925870 protein-coding Ablim3 actin binding LIM protein family member 3 INVOLVED IN cilium assembly (ortholog); lamellipodium assembly (ortholog); positive regulation of protein localization to mitochondrion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); stress fiber (ortholog) NW_004955415 5151445 5261300 - 102028410 AGCD01015991;GBCB01041836;XM_005380619;XM_005380622;XM_005380626;XM_013512341;XM_013512342;XM_013512343;XM_013512344 XP_005380676;XP_005380679;XP_005380683;XP_013367795;XP_013367796;XP_013367797;XP_013367798 MODEL 8914651 protein-coding Adss2 adenylosuccinate synthase 2 ENCODES a protein that exhibits adenylosuccinate synthase activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); AMP biosynthetic process (ortholog); cellular response to electrical stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 7684979 7715179 - 102007403 AGCD01005774;GBDF01047341;XM_005374781 XP_005374838 MODEL 8814255 protein-coding LOC102009604 laforin NW_004955477 658249 660233 - 102009604 AGCD01055492;AGCD01055493;GBDJ01162178;XM_005402077 XP_005402134 MODEL 8907434 protein-coding Setbp1 SET binding protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); astigmatism (ortholog); FOUND IN nuclear body (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955402 30380346 30738869 + 102026697 AGCD01000770;AGCD01000771;AGCD01000772;AGCD01000773;AGCD01000774;AGCD01000775;AGCD01000776;AGCD01000777;AGCD01000778;GBCE01116826;XM_005373166 XP_005373223 MODEL 39131530 protein-coding BTBD9 BTB domain containing 9 8873850 protein-coding Rbm33 RNA binding motif protein 33 ENCODES a protein that exhibits lncRNA binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of mRNA stability (ortholog); RNA export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955491 8534093 8633838 + 102018611 AGCD01060617;AGCD01060618;AGCD01060619;GBDF01052102;XM_005404864;XM_005404865;XM_005404866;XM_005404868;XM_013504634 XP_005404921;XP_005404922;XP_005404923;XP_005404925;XP_013360088 MODEL 8753860 protein-coding Acyp2 acylphosphatase 2 ENCODES a protein that exhibits acylphosphatase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH chronic recurrent multifocal osteomyelitis (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955415 32510613 32511105 + 102003441 AGCD01016723;GBDF01193184;XM_005381058 XP_005381115 MODEL 8962572 protein-coding Snrpf small nuclear ribonucleoprotein polypeptide F ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); RNA splicing (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); nasopharynx carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955405 32236876 32242716 + 102007186 AGCD01005331;GBDJ01079208;XM_005374489 XP_005374546 MODEL 39134018 misc_rna 7SK 7SK RNA 10280505 ncrna LOC106150322 uncharacterized LOC106150322 NW_004955471 2855868 2858402 - 106150322 AGCD01053049;GBCB01110176;XR_001237059 MODEL 8767652 ncrna LOC102005832 uncharacterized LOC102005832 NW_004955432 9508053 9514240 + 102005832 AGCD01030907;GBDF01055577;XR_261519 MODEL 9028100 pseudo LOC102004399 suppressor of cytokine signaling 5-like NW_004955495 3002495 3005343 + 102004399 AGCD01061814;AGCD01061815 MODEL 8950182 protein-coding Epb41l5 erythrocyte membrane protein band 4.1 like 5 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); apical constriction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955459 9641926 9783718 - 102017547 AGCD01048164;AGCD01048165;AGCD01048166;AGCD01048167;AGCD01048168;AGCD01048169;AGCD01048170;AGCD01048171;GBCE01115046;XM_005397654;XM_005397658;XM_005397659 XP_005397711;XP_005397715;XP_005397716 MODEL 8771443 protein-coding Vxn vexin INVOLVED IN neurogenesis (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) NW_004955444 12659894 12684919 - 102016529 AGCD01039078;GBCQ01140368;XM_005392150;XM_005392151;XM_005392152 XP_005392207;XP_005392208;XP_005392209 MODEL 8921146 protein-coding Pld1 phospholipase D1 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); defense response to Gram-positive bacterium (ortholog); phosphatidic acid biosynthetic process (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN apical plasma membrane (ortholog); cholinergic synapse (ortholog); endocytic vesicle (ortholog) NW_004955420 1697716 1892741 - 102026748 AGCD01020576;AGCD01020577;AGCD01020578;AGCD01020579;AGCD01020580;AGCD01020581;AGCD01020582;GBDI01326771;XM_005382998;XM_005382999;XM_005383000;XM_005383002;XM_013513558;XM_013513559;XM_013513560;XM_013513561 XP_005383055;XP_005383056;XP_005383057;XP_005383059;XP_013369012;XP_013369013;XP_013369014;XP_013369015 MODEL 8957824 ncrna LOC102004771 uncharacterized LOC102004771 NW_004955451 12688753 12693749 - 102004771 AGCD01043420;GBDI01181575;XR_001235990;XR_001235991;XR_262597 MODEL 8902435 protein-coding Aldh1a2 aldehyde dehydrogenase 1 family member A2 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); retinal binding (ortholog); retinal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); anterior/posterior pattern specification (ortholog); blood vessel development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH colorectal cancer (ortholog); Coronary Occlusion (ortholog); Diaphragmatic Hernia 4 (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955450 16406578 16453048 + 102018142 AGCD01042843;AGCD01042844;GBCB01109320;XM_005393844;XM_005393845 XP_005393901;XP_005393902 MODEL 9012219 protein-coding Abr ABR activator of RhoGEF and GTPase ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); brain development (ortholog); inner ear morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955481 2503309 2710667 - 102027641 AGCD01056876;AGCD01056877;AGCD01056878;AGCD01056879;GBCE01117779;GBDJ01075590;XM_005402643 XP_005402700 MODEL 8775706 ncrna LOC102012010 uncharacterized LOC102012010 NW_004955506 6455233 6469865 - 102012010 AGCD01065423;AGCD01065424;AGCD01065425;AGCD01065426;GBDF01119360;XR_264363 MODEL 8918811 protein-coding Ckap5 cytoskeleton associated protein 5 ENCODES a protein that exhibits microtubule binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); centrosome cycle (ortholog); cytoplasmic translation (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955422 1266686 1354323 + 102007444 AGCD01022452;AGCD01022453;AGCD01022454;AGCD01022455;AGCD01022456;GBBH01163556;GBDF01049537;XM_013514063 XP_013369517 MODEL 8775674 protein-coding LOC102008105 translation initiation factor IF-2-like NW_004955481 3628568 3637628 - 102008105 AGCD01056909;GBDI01140316;XM_005402923 XP_005402980 MODEL 9002298 protein-coding Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); IkappaB kinase activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); breast cancer (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955536 611965 658647 - 102009105 AGCD01070732;GBDI01225670;XM_005410510 XP_005410567 MODEL 8788695 protein-coding Slc2a4 solute carrier family 2 member 4 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); D-glucose uniporter activity (ortholog); INVOLVED IN amylopectin biosynthetic process (ortholog); brown fat cell differentiation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) NW_004955467 9630304 9636005 - 102022580 AGCD01051520;GBCB01005958;XM_005399526 XP_005399583 MODEL 8774516 ncrna LOC102010003 uncharacterized LOC102010003 NW_004955447 16623757 16625250 + 102010003 AGCD01041095;GBDF01280990;XR_262438 MODEL 8977650 ncrna LOC102013599 uncharacterized LOC102013599 NW_004955471 11197604 11202115 - 102013599 AGCD01053249;GBBH01075240;XR_001237058 MODEL 8872726 protein-coding LOC102004019 eppin NW_004955445 11687818 11693955 + 102004019 AGCD01039713;GBDF01009129;XM_005392422 XP_005392479 MODEL 8863761 protein-coding Atp6v0a4 ATPase H+ transporting V0 subunit a4 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN ossification (ortholog); proton transmembrane transport (ortholog); regulation of pH (ortholog); ASSOCIATED WITH autosomal recessive distal renal tubular acidosis 3 with or without sensorineural hearing loss (ortholog); cervical cancer (ortholog); Dehydration (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955494 4174542 4251450 + 102030207 AGCD01061493;GBDJ01072962;XM_005405451;XM_005405452;XM_005405453;XM_005405454;XM_013505029 XP_005405508;XP_005405509;XP_005405510;XP_005405511;XP_013360483 MODEL 8977734 protein-coding Cdh9 cadherin 9 ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); identical protein binding (ortholog); INVOLVED IN synapse assembly (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955426 13702357 13841177 - 102016294 AGCD01026366;AGCD01026367;AGCD01026368;AGCD01026369;AGCD01026370;AGCD01026371;AGCD01026372;AGCD01026373;XM_005386143 XP_005386200 MODEL 8846431 protein-coding LOC102010812 zinc finger protein 35 NW_004955420 26847358 26895078 - 102010812 AGCD01021434;AGCD01021435;GBCB01086637;XM_013513410;XM_013513411;XM_013513412;XM_013513413;XM_013513414;XM_013513415 XP_013368864;XP_013368865;XP_013368866;XP_013368867;XP_013368868;XP_013368869 MODEL 8940649 protein-coding Trip13 thyroid hormone receptor interactor 13 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN double-strand break repair (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN male germ cell nucleus (ortholog) NW_004955504 434187 452636 + 102029767 AGCD01064819;GBDF01223456;XM_005407032 XP_005407089 MODEL 39134304 misc_rna 7SK 7SK RNA 8711921 protein-coding LOC102008850 centromere protein Q-like NW_004955481 3368425 3369339 + 102008850 AGCD01056902;XM_013503357 XP_013358811 MODEL 8843895 protein-coding LOC102013198 olfactory receptor 1052-like NW_004955511 1015613 1016557 + 102013198 AGCD01066353;XM_005408221 XP_005408278 MODEL 9019508 pseudo LOC102018199 cyclin-G1 pseudogene NW_004955425 7631390 7649613 + 102018199 AGCD01025391 MODEL 39132003 rrna 5S_rRNA 5S ribosomal RNA 8916785 protein-coding Rps6 ribosomal protein S6 ENCODES a protein that exhibits mRNA binding (ortholog); protein kinase binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); cellular response to ethanol (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955434 21744045 21745646 - 102018760 AGCD01032652;GBCC01000928;GBDF01006013;XM_013516306 XP_013371760 MODEL 8741787 protein-coding Catsper1 cation channel sperm associated 1 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); flagellated sperm motility (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH glycogen storage disease V (ortholog); ovarian serous cystadenocarcinoma (ortholog); spermatogenic failure 7 (ortholog); FOUND IN CatSper complex (ortholog); plasma membrane (ortholog); sperm flagellum (ortholog) NW_004955422 19315640 19322868 + 102020926 AGCD01022999;GBDF01119307;XM_005384434;XM_013514142;XM_013514143 XP_005384491;XP_013369596;XP_013369597 MODEL 39132243 rrna 5S_rRNA 5S ribosomal RNA 8855913 ncrna LOC102005833 uncharacterized LOC102005833 NW_004955516 4052159 4191251 + 102005833 AGCD01067516;AGCD01067517;AGCD01067518;AGCD01067519;GBBH01058464;XR_264537 MODEL 8877079 protein-coding Cep290 centrosomal protein 290 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule minus-end binding (ortholog); INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955405 25533037 25607021 - 102009343 AGCD01005177;GBDI01291866;XM_013518124;XM_013518127;XM_013518131 XP_013373578;XP_013373581;XP_013373585 MODEL 8734927 pseudo LOC102008477 40S ribosomal protein S24 pseudogene NW_004955447 14840245 14840673 - 102008477 AGCD01041022 MODEL 8837927 pseudo LOC102002985 nucleophosmin pseudogene NW_004955451 90063 90680 - 102002985 AGCD01042917 MODEL 8804866 protein-coding LOC102006916 olfactory receptor 13F1 NW_004955419 21914434 21915393 - 102006916 AGCD01020292;XM_005382939 XP_005382996 MODEL 730469404 misc_rna DLEU2_5 Deleted in lymphocytic leukemia 2 conserved region 5 8860144 protein-coding Cd180 CD180 molecule ENCODES a protein that exhibits lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); B cell proliferation involved in immune response (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955446 1940498 1959804 + 102012258 AGCD01039977;GBCE01120554;XM_005392600 XP_005392657 MODEL 8967317 pseudo LOC102007297 stromal membrane-associated protein 1 pseudogene NW_004955454 15354912 15356393 + 102007297 AGCD01045493 MODEL 8925769 protein-coding Aplf aprataxin and PNKP like factor ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; histone modification pathway; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955424 16338546 16449074 - 102021145 AGCD01024739;AGCD01024740;AGCD01024741;GBDI01026589;XM_005385664;XM_013514727;XM_013514728;XM_013514729;XM_013514730;XM_013514732 XP_005385721;XP_013370181;XP_013370182;XP_013370183;XP_013370184;XP_013370186 MODEL 39134020 misc_rna 7SK 7SK RNA 8749579 protein-coding Prdx3 peroxiredoxin 3 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to reactive oxygen species (ortholog); hydrogen peroxide catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 32 (ortholog); CORNEAL DYSTROPHY, PUNCTIFORM AND POLYCHROMATIC PRE-DESCEMET (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955431 23640775 23651738 - 102006940 AGCD01030547;GBDK01092760;XM_005387887 XP_005387944 MODEL 8889555 protein-coding CUNH4orf54 chromosome unknown C4orf54 homolog NW_004955496 7933953 7949207 + 102003464 AGCD01062387;GBCB01021934;XM_005406288 XP_005406345 MODEL 8876766 protein-coding LOC102022296 cocaine esterase-like NW_004955484 9769745 9781227 - 102022296 AGCD01058429;AGCD01058430;GBDF01020524;XM_013503865 XP_013359319 MODEL 8818010 pseudo LOC102013952 tyrosine--tRNA ligase, cytoplasmic pseudogene NW_004955503 7176606 7183842 + 102013952 AGCD01064783 MODEL 39134146 misc_rna 7SK 7SK RNA 8821764 ncrna LOC102004400 uncharacterized LOC102004400 NW_004955497 160123 162418 + 102004400 AGCD01062402;GBDF01039971;XR_264186 MODEL 8719403 protein-coding Adtrp androgen dependent TFPI regulating protein ENCODES a protein that exhibits FAHFA hydrolase activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955465 2721171 2823368 + 102017207 AGCD01050361;AGCD01050362;GBDK01307017;XM_005398822;XM_005398823;XM_013521868;XM_013521869;XM_013521870 XP_005398879;XP_005398880;XP_013377322;XP_013377323;XP_013377324 MODEL 39133714 misc_rna 7SK 7SK RNA 9031877 pseudo LOC102018200 60S ribosomal protein L9-like NW_004955501 4266517 4318674 - 102018200 AGCD01064120;AGCD01064121;AGCD01064122;AGCD01064123;AGCD01064124 MODEL 8781360 ncrna LOC102011604 uncharacterized LOC102011604 NW_004955592 442424 444289 + 102011604 AGCD01076315;GBDF01289807;XR_265137 MODEL 9059226 protein-coding Btc betacellulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN epidermal growth factor receptor signaling pathway (ortholog); ERBB2-EGFR signaling pathway (ortholog); ERBB4-ERBB4 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); erythropoietic protoporphyria (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955474 895573 946152 - 102007545 AGCD01054231;AGCD01054232;GBCB01020646;XM_005401314 XP_005401371 MODEL 8794080 ncrna LOC102012013 uncharacterized LOC102012013 NW_004955431 310644 317292 - 102012013 AGCD01029865;GBDK01414667;XR_261437 MODEL 8748320 protein-coding Ckb creatine kinase B ENCODES a protein that exhibits creatine kinase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to wortmannin (ortholog); cerebellum development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); mitochondrion (ortholog) NW_004955538 2379868 2380771 - 102017056 AGCD01071123;GBCQ01000449;GBDI01007602;XM_013507840 XP_013363294 MODEL 8915575 protein-coding Ada adenosine deaminase ENCODES a protein that exhibits 2'-deoxyadenosine deaminase activity (ortholog); adenosine deaminase activity (ortholog); deaminase activity (ortholog); INVOLVED IN adenosine catabolic process (ortholog); adenosine metabolic process (ortholog); AMP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenosine deaminase deficiency (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytoplasmic vesicle lumen (ortholog) NW_004955445 12696096 12717488 + 102016959 AGCD01039761;GBBH01228991;XM_005392467 XP_005392524 MODEL 8785429 protein-coding Abra actin binding Rho activating protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); myofibril (ortholog); plasma membrane (ortholog) NW_004955417 29874234 29883648 - 102025358 AGCD01018611;GBDI01356628;XM_005381954 XP_005382011 MODEL 8955703 protein-coding Fgf12 fibroblast growth factor 12 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); heparin binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); developmental and epileptic encephalopathy 47 (ortholog); epilepsy (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955420 15783184 16310743 + 102009951 AGCD01020981;AGCD01020982;AGCD01020983;AGCD01020984;AGCD01020985;AGCD01020986;AGCD01020987;AGCD01020988;AGCD01020989;GBDI01270942;XM_005383217;XM_013513605 XP_005383274;XP_013369059 MODEL 8776132 protein-coding Ankrd13c ankyrin repeat domain 13C ENCODES a protein that exhibits protein carrier activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); protein targeting to membrane (ortholog); regulation of anoikis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955423 21599563 21666343 + 102006929 AGCD01023945;AGCD01023946;GBBH01035257;GBDJ01001182;XM_005385250 XP_005385307 MODEL 8955692 ncrna LOC102009605 uncharacterized LOC102009605 NW_004955478 6496663 6507303 + 102009605 AGCD01055896;GBDF01194619;XR_001230836;XR_001230837;XR_001230838;XR_263699 MODEL 8999377 protein-coding Snrpg small nuclear ribonucleoprotein polypeptide G ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955424 14844318 14851720 + 102006149 AGCD01024660;GBCE01100469;XM_005385616 XP_005385673 MODEL 8809823 pseudo LOC102010813 60S ribosomal protein L7-like 1 pseudogene NW_004955421 23607848 23608582 + 102010813 AGCD01022191 MODEL 8928362 protein-coding Epb42 erythrocyte membrane protein band 4.2 INVOLVED IN cell morphogenesis (ortholog); hemoglobin metabolic process (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spherocytosis (ortholog); hereditary spherocytosis type 1 (ortholog); FOUND IN ankyrin-1 complex (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) NW_004955416 9784211 9800453 - 102029963 AGCD01017099;GBBH01193362;XM_005381368 XP_005381425 MODEL 8700349 ncrna LOC102008106 uncharacterized LOC102008106 NW_004955482 4507858 4511301 + 102008106 AGCD01057294;GBDF01156183;XR_001230999 MODEL 8740038 protein-coding Wac WW domain containing adaptor with coiled-coil ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adrenal Insufficiency (ortholog); anxiety disorder (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955462 2358842 2435644 + 102015612 AGCD01049165;AGCD01049166;GBBH01064776;XM_005398110;XM_013521376;XM_013521377;XM_013521378;XM_013521379;XM_013521380 XP_005398167;XP_013376830;XP_013376831;XP_013376832;XP_013376833;XP_013376834 MODEL 8781105 protein-coding Blk BLK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); positive regulation of insulin secretion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); diabetes mellitus (ortholog); Kawasaki disease (ortholog) NW_004955403 52825397 52874007 + 102028368 AGCD01003019;AGCD01003020;GBBH01183458;XM_005373820;XM_005373821;XM_005373822;XM_005373823;XM_013514535 XP_005373877;XP_005373878;XP_005373879;XP_005373880;XP_013369989 MODEL 39132244 rrna 5S_rRNA 5S ribosomal RNA 8954543 protein-coding Pld2 phospholipase D2 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to phorbol 13-acetate 12-myristate (ortholog); G protein-coupled receptor internalization (ortholog); neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; glycerophospholipid metabolic pathway; mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cervical cancer (ortholog); FOUND IN brush border membrane (ortholog); caveola (ortholog); lamellipodium (ortholog) NW_004955467 10239177 10250516 + 102016147 AGCD01051558;GBBH01166668;XM_005399602;XM_013522221;XM_013522222 XP_005399659;XP_013377675;XP_013377676 MODEL 8929205 pseudo LOC102005835 transcription initiation factor TFIID subunit 2-like NW_004955433 1848991 1866778 - 102005835 AGCD01031371;AGCD01031372 MODEL 9046661 protein-coding Aldh1a3 aldehyde dehydrogenase 1 family member A3 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); NAD+ binding (ortholog); INVOLVED IN embryonic camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); face development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); isolated microphthalmia 8 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955416 27823611 27858112 + 102008530 AGCD01017621;AGCD01017622;GBCQ01034845;XM_005381642 XP_005381699 MODEL 8946994 protein-coding Asic1 acid sensing ion channel subunit 1 ENCODES a protein that exhibits monoatomic cation channel activity (ortholog); monoatomic ion channel activity (ortholog); monoatomic ion-gated channel activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral fear response (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); brain ischemia (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955547 635714 658541 + 102013877 AGCD01072170;AGCD01072171;GBDI01179653;XM_005411871;XM_005411872;XM_013508480;XM_013508481 XP_005411928;XP_005411929;XP_013363934;XP_013363935 MODEL 8961014 protein-coding LOC102002991 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955406 23014463 23015572 + 102002991 AGCD01006162;XM_005375051 XP_005375108 MODEL 9016581 pseudo LOC102013602 zinc finger protein 14-like NW_004955415 31469208 31473139 - 102013602 AGCD01016676;AGCD01016677 MODEL 9026136 pseudo LOC102010005 39S ribosomal protein L47, mitochondrial pseudogene NW_004955449 1853430 1854383 + 102010005 AGCD01041814;XM_005393196 MODEL 8705695 pseudo LOC102004023 guanine deaminase-like NW_004955402 41170178 41171764 - 102004023 AGCD01001012 MODEL 10253491 ncrna LOC106150323 uncharacterized LOC106150323 NW_004955472 1421389 1431550 - 106150323 AGCD01053390;XR_001237064 MODEL 39134307 misc_rna 7SK 7SK RNA 8863957 protein-coding Atp6v0b ATPase H+ transporting V0 subunit b ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) NW_004955537 3501011 3504408 + 102009217 AGCD01070959;GBDI01001300;XM_005410694 XP_005410751 MODEL 8788014 protein-coding Cep295 centrosomal protein 295 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); positive regulation of centriole elongation (ortholog); positive regulation of centrosome duplication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955414 806238 860273 - 102020237 AGCD01014748;AGCD01014749;AGCD01014750;AGCD01014751;GBDK01318428;XM_013511832 XP_013367286 MODEL 8798974 protein-coding Cdhr1 cadherin related family member 1 INVOLVED IN photoreceptor cell maintenance (ortholog); photoreceptor cell morphogenesis (ortholog); photoreceptor cell outer segment organization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 12 (ortholog); FOUND IN photoreceptor outer segment membrane (ortholog); plasma membrane (ortholog) NW_004955510 3709206 3727448 + 102004407 AGCD01066247;GBCE01021262;XM_005407882 XP_005407939 MODEL 8778209 protein-coding LOC102008851 solute carrier family 7 member 13-like NW_004955417 3044836 3065300 + 102008851 AGCD01017903;XM_013512697 XP_013368151 MODEL 39132004 rrna 5S_rRNA 5S ribosomal RNA 8839513 ncrna LOC102013200 uncharacterized LOC102013200 NW_004955431 18996533 19001698 + 102013200 AGCD01030438;GBDF01083957;XR_001234628;XR_261489 MODEL 8712105 protein-coding Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon ENCODES a protein that exhibits identical protein binding (ortholog); IkappaB kinase activity (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to virus (ortholog); gene expression (ortholog); immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial membrane (ortholog) NW_004955406 42056014 42077701 + 102017949 AGCD01006696;GBDK01143454;XM_005375388;XM_005375389;XM_005375390;XM_005375392;XM_005375393 XP_005375445;XP_005375446;XP_005375447;XP_005375449;XP_005375450 MODEL 8806820 protein-coding Rps6ka1 ribosomal protein S6 kinase A1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); kinase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN hepatocyte proliferation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of TOR signaling (ortholog); PARTICIPATES IN adenosine signaling pathway; fibroblast growth factor signaling pathway; mTOR signaling pathway; ASSOCIATED WITH alcohol-related birth defects (ortholog); cervical cancer (ortholog); fetal alcohol spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955452 5905561 5938096 + 102019017 AGCD01044068;AGCD01044069;GBCQ01128314;GBDK01089881;XM_013519669;XM_013519670 XP_013375123;XP_013375124 MODEL 9060619 pseudo LOC102004774 protein FRG1 pseudogene NW_004955452 2196007 2237809 - 102004774 AGCD01043881;AGCD01043882;AGCD01043883;AGCD01043884 MODEL 8958217 protein-coding Setd1a SET domain containing 1A, histone lysine methyltransferase ENCODES a protein that exhibits beta-catenin binding (ortholog); histone H3K4 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); positive regulation of gene expression (ortholog); positive regulation of neural precursor cell proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); blepharophimosis (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955493 7808652 7834886 + 102020131 AGCD01061227;AGCD01061228;AGCD01061229;GBCB01061270;XM_013504748 XP_013360202 MODEL 9042911 ncrna LOC102004403 uncharacterized LOC102004403 NW_004955427 13583687 13585755 + 102004403 AGCD01027253;GBDF01082612;XR_001234372 MODEL 8925412 protein-coding LOC102006931 uncharacterized LOC102006931 NW_004955423 27013477 27045496 - 102006931 AGCD01024112;AGCD01024113;GBCB01041473;GBCB01041476;XM_013514386 XP_013369840 MODEL 8782764 protein-coding LOC102007299 keratin-associated protein 20-2-like NW_004955407 30163388 30163546 + 102007299 AGCD01007628;XM_005375641 XP_005375698 MODEL 8821393 protein-coding Trip4 thyroid hormone receptor interactor 4 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); nuclear estrogen receptor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); centronuclear myopathy (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); neuromuscular junction (ortholog) NW_004955450 11005842 11088192 - 102017084 AGCD01042643;AGCD01042644;AGCD01042645;AGCD01042646;AGCD01042647;GBDJ01063421;XM_005393753 XP_005393810 MODEL 39134022 misc_rna 7SK 7SK RNA 8944030 protein-coding Cd19 CD19 molecule ENCODES a protein that exhibits coreceptor activity (ortholog); signaling receptor complex adaptor activity (ortholog); INVOLVED IN antigen receptor-mediated signaling pathway (ortholog); B cell mediated immunity (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH agammaglobulinemia (ortholog); Breast Cancer, Familial (ortholog); common variable immunodeficiency (ortholog); FOUND IN external side of plasma membrane (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955493 6540160 6544077 - 102012973 AGCD01061119;GBDI01310097;XM_005405157;XM_013504842;XM_013504843 XP_005405214;XP_013360296;XP_013360297 MODEL 8836685 protein-coding CUNH5orf34 chromosome unknown C5orf34 homolog ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955446 18837488 18862396 + 102003916 AGCD01040415;GBDF01195920;XM_005392740;XM_005392741 XP_005392797;XP_005392798 MODEL 8967392 protein-coding LOC102008482 hornerin NW_004955589 190459 199095 + 102008482 AGCD01076158;AGCD01076159;GBCC01001512;XM_005414528;XM_005414529;XM_005414531;XM_013509953;XM_013509954 XP_005414585;XP_005414586;XP_005414588;XP_013365407;XP_013365408 MODEL 9064245 protein-coding Slc2a4rg SLC2A4 regulator ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955528 485653 488923 - 102004849 AGCD01069535;GBDJ01087928;GBDJ01087930;XM_005409944 XP_005410001 MODEL 8714120 ncrna LOC102013953 uncharacterized LOC102013953 NW_004955504 3387462 3397789 + 102013953 AGCD01064868;GBCB01085852;XR_264292 MODEL 39134147 misc_rna 7SK 7SK RNA 8931860 protein-coding Epc1 enhancer of polycomb homolog 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression, epigenetic (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); NuA4 histone acetyltransferase complex (ortholog); nuclear body (ortholog) NW_004955429 23819261 23910279 - 102005825 AGCD01029081;AGCD01029082;AGCD01029083;GBCE01136615;XM_005387225;XM_013515434 XP_005387282;XP_013370888 MODEL 39133715 misc_rna 7SK 7SK RNA 8739352 protein-coding Wapl WAPL cohesin release factor ENCODES a protein that exhibits ATP-dependent protein-DNA unloader activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromatin looping (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clubfoot (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955510 5596622 5674221 - 102007681 AGCD01066283;AGCD01066284;AGCD01066285;GBDI01171890;XM_005407895;XM_013506324 XP_005407952;XP_013361778 MODEL 9031301 pseudo LOC102018201 heat shock factor-binding protein 1 pseudogene NW_004955426 14759883 14760171 + 102018201 AGCD01026402;XM_005386144 MODEL 8887094 protein-coding LOC102011607 3-beta-hydroxysteroid sulfotransferase-like NW_004955609 280400 319841 - 102011607 AGCD01077056;AGCD01077057;GBCB01061931;XM_005414930 XP_005414987 MODEL 8875263 protein-coding Catsper2 cation channel sperm associated 2 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); fertilization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN CatSper complex (ortholog); sperm flagellum (ortholog); sperm principal piece (ortholog) NW_004955409 3925106 3940566 - 102030503 AGCD01009267;AGCD01009268;GBDF01053312;XM_005376669;XM_013509966;XM_013509978 XP_005376726;XP_013365420;XP_013365432 MODEL 8703664 protein-coding Ckm creatine kinase, M-type ENCODES a protein that exhibits creatine kinase activity (ortholog); INVOLVED IN phosphocreatine biosynthetic process (ortholog); PARTICIPATES IN creatine metabolic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Colonic Neoplasms (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955555 2318072 2330733 - 102009326 AGCD01073144;AGCD01073145;GBDJ01231000;XM_005412510 XP_005412567 MODEL 8724032 protein-coding Apln apelin ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); drinking behavior (ortholog); PARTICIPATES IN apelin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Cardiomegaly (ortholog); FOUND IN extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955473 5346822 5356359 + 102013713 AGCD01053974;GBDK01240998;XM_005401260;XM_005401261 XP_005401317;XP_005401318 MODEL 8943144 protein-coding Ada2 adenosine deaminase 2 ENCODES a protein that exhibits adenosine deaminase activity (ortholog); adenosine receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adenosine catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ataxia telangiectasia (ortholog); Behcet's disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955454 5341822 5355383 - 102029825 AGCD01045149;AGCD01045150;AGCD01045151;GBCQ01016306;XM_005395969;XM_005395970;XM_013520005;XM_013520006;XR_001236207 XP_005396026;XP_005396027;XP_013375459;XP_013375460 MODEL 8829781 protein-coding Fgf13 fibroblast growth factor 13 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN apoptotic process (ortholog); branching morphogenesis of a nerve (ortholog); cerebral cortex cell migration (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 90 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955489 6122707 6621624 + 102008113 AGCD01059957;AGCD01059958;AGCD01059959;AGCD01059960;AGCD01059961;AGCD01059962;GBCB01043793;XM_005404571;XM_005404572;XM_005404573;XM_013504503 XP_005404628;XP_005404629;XP_005404630;XP_013359957 MODEL 8953020 protein-coding LOC102022297 arylacetamide deacetylase-like 4 NW_004955486 1253339 1293734 - 102022297 AGCD01058938;AGCD01058939;XM_005403944;XM_013504152 XP_005404001;XP_013359606 MODEL 9015858 protein-coding Aebp1 AE binding protein 1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); collagen binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of collagen fibril organization (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955456 7860191 7868526 - 102022163 AGCD01046435;GBBH01031727;XM_005396673 XP_005396730 MODEL 10368584 protein-coding Cep295nl CEP295 N-terminal like FOUND IN motile cilium (ortholog) NW_004955506 3780240 3791540 + 106146241 AGCD01065319;GBDF01044585;XM_005407354;XM_005407356;XM_013506100;XM_013506101;XM_013506102;XM_013506103;XM_013506104;XM_013506105;XM_013506106;XM_013506107;XM_013506108;XM_013506109 XP_005407411;XP_005407413;XP_013361554;XP_013361555;XP_013361556;XP_013361557;XP_013361558;XP_013361559;XP_013361560;XP_013361561;XP_013361562;XP_013361563 MODEL 8708333 ncrna LOC102008854 uncharacterized LOC102008854 NW_004955418 25551560 25572621 - 102008854 AGCD01019367;GBDF01180351;XR_260584 MODEL 8813480 pseudo LOC102010817 60S ribosomal protein L9 pseudogene NW_004955424 4777949 4778494 + 102010817 AGCD01024365 MODEL 8837479 ncrna LOC102009608 uncharacterized LOC102009608 NW_004955481 940584 941784 - 102009608 AGCD01056818;GBDF01049337;XR_263757 MODEL 8756270 ncrna LOC102013201 uncharacterized LOC102013201 NW_004955514 2802131 2803038 - 102013201 AGCD01067089;GBDF01249222;XR_264503 MODEL 9050498 protein-coding Abracl ABRA C-terminal like ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955436 20634128 20645609 - 102013756 AGCD01034032;AGCD01034033;AGCD01034034;GBBH01207589;XM_005389264 XP_005389321 MODEL 39132245 rrna 5S_rRNA 5S ribosomal RNA 9044566 protein-coding Blm BLM RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); ATP binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); cellular response to camptothecin (ortholog); cellular response to hydroxyurea (ortholog); PARTICIPATES IN DNA replication pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); B-cell lymphoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); lateral element (ortholog) NW_004955416 14814753 14899865 + 102015513 AGCD01017283;AGCD01017284;AGCD01017285;AGCD01017286;GBDF01222241;XM_005381505;XM_005381506;XM_013512656;XM_013512657 XP_005381562;XP_005381563;XP_013368110;XP_013368111 MODEL 9031711 ncrna LOC102005842 uncharacterized LOC102005842 NW_004955439 2255721 2292358 + 102005842 AGCD01035638;AGCD01035639;AGCD01035640;GBBH01163336;XR_001235211;XR_001235212;XR_261967 MODEL 39133716 misc_rna 7SK 7SK RNA 8823325 protein-coding Prdx4 peroxiredoxin 4 ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); molecular sequestering activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); extracellular matrix organization (ortholog); male gonad development (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955509 4111501 4132529 + 102013957 AGCD01066053;GBDF01050840;XM_005407830;XM_005407832;XM_013506292 XP_005407887;XP_005407889;XP_013361746 MODEL 9061988 ncrna LOC102002993 uncharacterized LOC102002993 NW_004955407 12761327 12805870 - 102002993 AGCD01007138;AGCD01007139;GBDF01086288;XR_001230993 MODEL 8906288 ncrna LOC102006934 uncharacterized LOC102006934 NW_004955425 7579288 7588814 + 102006934 AGCD01025389;GBDF01234416;XR_261134 MODEL 8966527 pseudo LOC102010007 inaD-like protein pseudogene NW_004955402 42875359 42877029 - 102010007 AGCD01001050 MODEL 8811802 protein-coding Asic2 acid sensing ion channel subunit 2 ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to xenobiotic stimulus (ortholog); detection of mechanical stimulus involved in sensory perception (ortholog); ASSOCIATED WITH autistic disorder (ortholog); dilated cardiomyopathy 1A (ortholog); high grade glioma (ortholog); FOUND IN dendritic spine (ortholog); membrane (ortholog); neuron projection (ortholog) NW_004955481 7850730 8093255 - 102030422 AGCD01057078;AGCD01057079;AGCD01057080;GBBH01205767;GBDJ01044546;XM_005402835 XP_005402892 MODEL 8875025 protein-coding Btd biotinidase ENCODES a protein that exhibits biotinidase activity (ortholog); INVOLVED IN biotin metabolic process (ortholog); PARTICIPATES IN biotin metabolic pathway; biotinidase deficiency pathway; holocarboxylase synthetase deficiency pathway; ASSOCIATED WITH autistic disorder (ortholog); biotin deficiency (ortholog); biotinidase deficiency (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog); nucleolus (ortholog) NW_004955430 7960036 7988754 + 102022111 AGCD01029378;GBDF01001926;XM_005387438;XM_005387439;XM_005387440;XM_005387441;XM_005387442;XM_005387443;XM_013515701;XM_013515702 XP_005387495;XP_005387496;XP_005387497;XP_005387498;XP_005387499;XP_005387500;XP_013371155;XP_013371156 MODEL 39134024 misc_rna 7SK 7SK RNA 8869592 protein-coding Trip6 thyroid hormone receptor interactor 6 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); kinase binding (ortholog); INVOLVED IN chordate embryonic development (ortholog); positive regulation of cell migration (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955573 102649 107047 - 102012378 AGCD01074962;GBCE01054728;XM_005413686 XP_005413743 MODEL 8711858 pseudo LOC102004024 KATNB1-like protein 1 NW_004955402 52891404 52893054 - 102004024 AGCD01001350 MODEL 39134310 misc_rna 7SK 7SK RNA 9027538 protein-coding Rbm34 RNA binding motif protein 34 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog) NW_004955492 4732249 4754433 + 102023609 AGCD01060728;AGCD01060729;GBBH01193549;GBDK01239466;XM_005405017 XP_005405074 MODEL 8747015 protein-coding Cdhr2 cadherin related family member 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN brush border assembly (ortholog); cell-cell adhesion mediated by cadherin (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955408 28832362 28871345 + 102014325 AGCD01008732;AGCD01008733;GBCQ01066107;XM_013509624;XM_013509630;XM_013509633 XP_013365078;XP_013365084;XP_013365087 MODEL 730469275 misc_rna DLEU2_5 Deleted in lymphocytic leukemia 2 conserved region 5 39132005 rrna 5S_rRNA 5S ribosomal RNA 8769321 protein-coding Atp6v0c ATPase H+ transporting V0 subunit c ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); proton transmembrane transporter activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); negative regulation of autophagic cell death (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH early-onset epilepsy 3 (ortholog); epilepsy (ortholog); familial febrile seizures (ortholog); FOUND IN lysosomal membrane (ortholog); lysosomal proton-transporting V-type ATPase complex (ortholog); membrane (ortholog) NW_004955442 14791795 14798066 - 102022127 AGCD01037839;GBCB01005064;XM_005391424 XP_005391481 MODEL 10222055 ncrna LOC106150324 uncharacterized LOC106150324 NW_004955472 8050630 8054790 + 106150324 AGCD01053637;GBBH01048292;XR_001237065 MODEL 8722068 protein-coding Snrpn small nuclear ribonucleoprotein polypeptide N INVOLVED IN response to hormone (ortholog); ASSOCIATED WITH Angelman syndrome (ortholog); autistic disorder (ortholog); Prader-Willi syndrome (ortholog); FOUND IN U1 snRNP (ortholog); U2 snRNP (ortholog) NW_004955416 31668789 31674144 + 102023030 AGCD01017768;XM_013512673 XP_013368127 MODEL 8928036 ncrna LOC102013605 uncharacterized LOC102013605 NW_004955478 10038664 10039724 - 102013605 AGCD01056117;GBDF01253856;XR_263713 MODEL 8869504 pseudo LOC102008107 olfactory receptor 56-like NW_004955418 29732474 29747780 + 102008107 AGCD01019481 MODEL 8776917 protein-coding Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ENCODES a protein that exhibits identical protein binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); linear polyubiquitin binding (ortholog); INVOLVED IN anoikis (ortholog); B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN FasL mediated signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); anemia (ortholog); Behcet's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); IkappaB kinase complex (ortholog) NW_004955580 1053823 1069802 + 102006084 AGCD01075642;AGCD01075643;GBDI01021108;XM_005414210;XM_005414211;XM_005414213;XM_005414214;XM_013509705;XM_013509706 XP_005414267;XP_005414268;XP_005414270;XP_005414271;XP_013365159;XP_013365160 MODEL 8723676 protein-coding Slc2a5 solute carrier family 2 member 5 ENCODES a protein that exhibits fructose binding (ortholog); fructose transmembrane transporter activity (ortholog); INVOLVED IN cellular response to fructose stimulus (ortholog); D-glucose transmembrane transport (ortholog); fructose import across plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); sarcolemma (ortholog) NW_004955486 4194568 4208568 + 102024804 AGCD01059057;GBDF01002394;XM_005404044;XM_013504322 XP_005404101;XP_013359776 MODEL 8802016 ncrna LOC102004406 uncharacterized LOC102004406 NW_004955429 12619449 12635931 - 102004406 AGCD01028726;AGCD01028727;GBDF01079147;XR_261325 MODEL 8828266 protein-coding Pld3 phospholipase D family member 3 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of toll-like receptor 9 signaling pathway (ortholog); positive regulation of intralumenal vesicle formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955578 884700 905426 - 102016536 AGCD01075500;GBCE01000031;XM_005414062;XM_005414063;XM_005414064;XM_005414066;XM_013509653;XM_013509654 XP_005414119;XP_005414120;XP_005414121;XP_005414123;XP_013365107;XP_013365108 MODEL 8795159 protein-coding Epc2 enhancer of polycomb 2 INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleosome (ortholog) NW_004955440 14573960 14645171 + 102026045 AGCD01036473;GBDK01240424;XM_005390801 XP_005390858 MODEL 8760319 protein-coding Cd2 CD2 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); heterotypic cell-cell adhesion (ortholog); natural killer cell activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nephrotic syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955435 19861658 19876383 + 102004418 AGCD01033438;GBDF01020465;XM_005389045;XM_005389046;XM_013516558 XP_005389102;XP_005389103;XP_013372012 MODEL 8964918 protein-coding LOC102012015 carboxylesterase 1D-like NW_004955433 13630963 13654307 - 102012015 AGCD01031696;GBDF01156979;XM_013516095;XM_013516096 XP_013371549;XP_013371550 MODEL 8737531 protein-coding LOC102008486 vomeronasal type-1 receptor 4-like NW_004955603 3670 4617 + 102008486 AGCD01076801;XM_005414840 XP_005414897 MODEL 9014093 protein-coding Rps6ka2 ribosomal protein S6 kinase A2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN brain renin-angiotensin system (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to carbohydrate stimulus (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); bipolar disorder (ortholog); FOUND IN cytoplasm (ortholog); meiotic spindle (ortholog); nucleoplasm (ortholog) NW_004955439 15210882 15487305 + 102025177 AGCD01036001;AGCD01036002;AGCD01036003;GBDK01073400;XM_005390650;XM_005390652;XM_013517373 XP_005390707;XP_005390709;XP_013372827 MODEL 39134148 misc_rna 7SK 7SK RNA 8885126 protein-coding Ankrd13d ankyrin repeat domain 13D ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955422 18159337 18170480 - 102024810 AGCD01022938;GBCE01123588;XM_005384354;XM_013513947;XM_013513948;XM_013513949;XM_013513951;XM_013513952;XM_013513953;XM_013513954 XP_005384411;XP_013369401;XP_013369402;XP_013369403;XP_013369405;XP_013369406;XP_013369407;XP_013369408 MODEL 8952073 protein-coding LOC102007302 chromosome unknown open reading frame, human C7orf57 ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955456 5399326 5414002 - 102007302 AGCD01046327;GBDK01321191;XM_005396629 XP_005396686 MODEL 9049939 protein-coding LOC102018205 carbonyl reductase [NADPH] 2 NW_004955506 1131548 1133857 + 102018205 AGCD01065246;GBDF01237291;XM_005407225 XP_005407282 MODEL 8982443 ncrna LOC102011610 uncharacterized LOC102011610 NW_004955451 5820260 5823021 - 102011610 AGCD01043179;GBDJ01389060;XR_001236001;XR_001236002 MODEL 8962046 protein-coding Ckmt2 creatine kinase, mitochondrial 2 ENCODES a protein that exhibits cardiolipin binding (ortholog); INVOLVED IN heart development (ortholog); skeletal muscle tissue development (ortholog); FOUND IN mitochondrion (ortholog) NW_004955418 28909999 28929109 - 102013721 AGCD01019447;AGCD01019448;GBDI01007315;XM_005382313;XM_013513078 XP_005382370;XP_013368532 MODEL 8763655 protein-coding Aebp2 AE binding protein 2 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN ESC/E(Z) complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 15514247 15561233 + 102012943 AGCD01014077;GBCQ01155053;GBDF01196223;XM_005379044 XP_005379101 MODEL 8731544 protein-coding Aplnr apelin receptor ENCODES a protein that exhibits apelin receptor activity (ortholog); G protein-coupled peptide receptor activity (ortholog); mechanoreceptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult heart development (ortholog); aorta development (ortholog); PARTICIPATES IN apelin signaling pathway; ASSOCIATED WITH lung cancer (ortholog); pulmonary venoocclusive disease (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955511 2321445 2324417 - 102014698 AGCD01066398;GBDI01358063;XM_005407987 XP_005408044 MODEL 39134025 misc_rna 7SK 7SK RNA 8749536 protein-coding Fgf14 fibroblast growth factor 14 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH cartilage disease (ortholog); cognitive disorder (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955404 8704344 9329917 + 102003829 AGCD01003357;AGCD01003358;AGCD01003359;AGCD01003360;AGCD01003361;AGCD01003362;AGCD01003363;AGCD01003364;AGCD01003365;AGCD01003366;AGCD01003367;AGCD01003368;GBDI01238697;XM_005374032;XM_005374033 XP_005374089;XP_005374090 MODEL 39134313 misc_rna 7SK 7SK RNA 39132006 rrna 5S_rRNA 5S ribosomal RNA 9054331 pseudo LOC102013956 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955428 10433744 10434754 - 102013956 AGCD01027867 MODEL 8796026 ncrna LOC102004776 uncharacterized LOC102004776 NW_004955405 37643987 37648127 + 102004776 AGCD01005457;GBDJ01389922;XR_259437 MODEL 8710505 pseudo LOC102008855 S-formylglutathione hydrolase pseudogene NW_004955483 8647789 8648240 - 102008855 AGCD01057841 MODEL 8855346 protein-coding LOC102010819 lariat debranching enzyme NW_004955501 832433 846485 + 102010819 AGCD01064041;AGCD01064042;GBDF01305392;XM_005406750 XP_005406807 MODEL 8769765 pseudo LOC102013205 DCN1-like protein 1 pseudogene NW_004955523 1164391 1165382 - 102013205 AGCD01068503 MODEL 39132247 rrna 5S_rRNA 5S ribosomal RNA 8753866 protein-coding Abraxas1 abraxas 1, BRCA1 A complex subunit ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN double-strand break repair (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of DNA repair (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955474 6252321 6265518 + 102003759 AGCD01054464;AGCD01054465;AGCD01054466;GBDF01127847;GBDK01359129;XM_013502752 XP_013358206 MODEL 8925949 protein-coding Blmh bleomycin hydrolase ENCODES a protein that exhibits aminopeptidase activity (ortholog); identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN response to toxic substance (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955481 3031283 3078678 + 102003869 AGCD01056891;AGCD01056892;AGCD01056893;GBDF01058051;XM_005402657;XM_005402658;XM_005402659 XP_005402714;XP_005402715;XP_005402716 MODEL 8844647 protein-coding LOC102004408 olfactory receptor 8K5-like NW_004955511 1428393 1429358 + 102004408 AGCD01066366;XM_013506374 XP_013361828 MODEL 39133724 misc_rna 7SK 7SK RNA 8753328 protein-coding Setd1b SET domain containing 1B, histone lysine methyltransferase ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); histone methyltransferase complex (ortholog) NW_004955482 6598176 6621944 - 102003135 AGCD01057403;AGCD01057404;AGCD01057405;AGCD01057406;GBCB01131998;GBDK01358092;XM_013503539 XP_013358993 MODEL 8760439 pseudo LOC102005851 40S ribosomal protein S2-like NW_004955444 6571938 6576569 - 102005851 AGCD01038872;XR_262283 MODEL 8857374 protein-coding LOC102002994 keratin-associated protein 13-1-like NW_004955407 29780142 29780702 - 102002994 AGCD01007614;XM_005375629 XP_005375686 MODEL 8726146 protein-coding Prdx5 peroxiredoxin 5 ENCODES a protein that exhibits antioxidant activity (ortholog); cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); hydrogen peroxide catabolic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia areata (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955422 20763822 20766976 - 102010595 AGCD01023086;GBCB01004546;XM_005384597 XP_005384654 MODEL 9005084 pseudo LOC102022299 protein odr-4 homolog NW_004955488 3218892 3220365 - 102022299 AGCD01059571 MODEL 8872076 protein-coding LOC102006937 olfactory receptor 5B3-like NW_004955511 3259255 3266476 - 102006937 AGCD01066452;XM_013506400 XP_013361854 MODEL 8821840 protein-coding LOC102010015 probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 NW_004955785 867 11463 + 102010015 AGCD01078339;AGCD01078340;AGCD01078341;AGCD01078342;XM_013510191 XP_013365645 MODEL 8840137 protein-coding Adad1 adenosine deaminase domain containing 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955428 18190927 18220361 - 102015426 AGCD01028058;GBDF01008505;XM_005386771;XM_005386772;XM_005386773 XP_005386828;XP_005386829;XP_005386830 MODEL 8824521 pseudo LOC102004025 ADP-ribosylation factor-like protein 4A NW_004955402 1033825 1036943 + 102004025 AGCD01000045 MODEL 8873421 protein-coding Aldh1b1 aldehyde dehydrogenase 1 family member B1 ENCODES a protein that exhibits acetaldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); benzaldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN ethanol catabolic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; ASSOCIATED WITH cervical cancer (ortholog); cholestasis (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955419 28155174 28159752 - 102027529 AGCD01020460;GBBH01110885;XM_005382856 XP_005382913 MODEL 9053879 protein-coding Cdhr3 cadherin related family member 3 ASSOCIATED WITH allergic asthma (ortholog); allergic disease (ortholog); asthma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 10457078 10520429 + 102027619 AGCD01010795;GBCE01171107;XM_005377265;XM_013510534 XP_005377322;XP_013365988 MODEL 39134316 misc_rna 7SK 7SK RNA 8907700 pseudo LOC102013607 TBC1 domain family member 1-like NW_004955481 9976291 9977512 - 102013607 AGCD01057130 MODEL 9017453 protein-coding Atp6v0d1 ATPase H+ transporting V0 subunit d1 ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); protein-containing complex binding (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); esophageal cancer (ortholog); lipodystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); centrosome (ortholog) NW_004955484 9167439 9206193 + 102030532 AGCD01058412;GBDF01047324;XM_005403648 XP_005403705 MODEL 9034251 protein-coding Ikzf1 IKAROS family zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); B cell differentiation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Addison's disease (ortholog); anal canal squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); pericentric heterochromatin (ortholog) NW_004955456 3617988 3721791 - 102029707 AGCD01046278;AGCD01046279;AGCD01046280;GBDJ01115764;XM_005396609;XM_005396610;XM_005396617;XM_013520610;XM_013520611;XM_013520612;XM_013520613;XM_013520614;XM_013520615;XM_013520616;XM_013520617;XM_013520618 XP_005396666;XP_005396667;XP_005396674;XP_013376064;XP_013376065;XP_013376066;XP_013376067;XP_013376068;XP_013376069;XP_013376070;XP_013376071;XP_013376072 MODEL 9052965 protein-coding Slc2a6 solute carrier family 2 member 6 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); regulation of glycolytic process (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955513 2796086 2802051 - 102017903 AGCD01066890;GBBH01198307;XM_005408447;XM_005408448 XP_005408504;XP_005408505 MODEL 730469174 misc_rna DLEU2_6 Deleted in lymphocytic leukemia 2 conserved region 6 9009511 ncrna LOC102008109 uncharacterized LOC102008109 NW_004955419 15542763 15563815 - 102008109 AGCD01020083;GBDF01286433;XR_260633 MODEL 8832920 protein-coding CUNH5orf46 chromosome unknown C5orf46 homolog ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Hereditary Neoplastic Syndromes (ortholog); sarcoma (ortholog) NW_004955415 6312822 6317652 + 102010151 AGCD01016014;GBCE01159697;XM_005380651 XP_005380708 MODEL 8725356 protein-coding LOC102009610 dnaJ homolog subfamily C member 25 NW_004955419 15664786 15684889 - 102009610 AGCD01020086;AGCD01020087;GBBH01057437;GBDF01120670;XM_013513302 XP_013368756 MODEL 8968739 protein-coding Catsper3 cation channel sperm associated 3 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sodium ion transport (ortholog); sperm capacitation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); CatSper complex (ortholog); endoplasmic reticulum (ortholog) NW_004955408 30150736 30179834 + 102007859 AGCD01008799;AGCD01008800;GBDF01224920;XM_005376470;XM_013507175;XM_013507180;XM_013507183 XP_005376527;XP_013362629;XP_013362634;XP_013362637 MODEL 8778321 pseudo LOC102011611 spliceosome-associated protein CWC15 homolog pseudogene NW_004955403 25832090 25832764 + 102011611 AGCD01002295 MODEL 8893173 protein-coding Epcam epithelial cell adhesion molecule ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955441 14155084 14167584 + 102018032 AGCD01037179;AGCD01037180;AGCD01037181;AGCD01037182;GBCE01007173;GBCQ01011851;XM_013517611 XP_013373065 MODEL 8786173 protein-coding Btf3 basic transcription factor 3 INVOLVED IN in utero embryonic development (ortholog); negative regulation of protein localization to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nascent polypeptide-associated complex (ortholog) NW_004955425 27099207 27105644 - 102007789 AGCD01025960;GBDF01008196;XM_005386072;XM_005386073 XP_005386129;XP_005386130 MODEL 8756358 protein-coding Cks1b CDC28 protein kinase regulatory subunit 1B INVOLVED IN cell population proliferation (ortholog); mitotic cell cycle phase transition (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955545 1479454 1483474 + 102016751 AGCD01071856;GBDF01085704;XM_005411535 XP_005411592 MODEL 8708577 protein-coding Triqk triple QxxK/R motif containing ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955417 9397726 9450794 - 102017014 AGCD01018052;GBDK01025200;XM_005381781;XM_005381782;XM_005381783;XM_013512847;XM_013512848 XP_005381838;XP_005381839;XP_005381840;XP_013368301;XP_013368302 MODEL 9059092 protein-coding Rbm38 RNA binding motif protein 38 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 2036314 2050882 - 102004430 AGCD01039348;GBBH01032146;GBDF01047365;XM_005392253 XP_005392310 MODEL 8900040 pseudo LOC102012019 RNA-binding motif protein, X chromosome-like NW_004955436 8932484 8933843 - 102012019 AGCD01033755;XR_261778 MODEL 10238147 protein-coding LOC106150325 translation initiation factor IF-2-like NW_004955472 1577929 1588095 - 106150325 AGCD01053401;AGCD01053402;GBDI01034980;GBDI01165836;XM_013522927 XP_013378381 MODEL 8717181 protein-coding LOC102008487 actin cytoskeleton-regulatory complex protein pan1-like NW_004955451 2446558 2456251 - 102008487 AGCD01043009;GBBH01184630;XM_013519305 XP_013374759 MODEL 8785059 protein-coding Cep350 centrosomal protein 350 INVOLVED IN non-motile cilium assembly (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955406 19178993 19329467 + 102010668 AGCD01006075;AGCD01006076;AGCD01006077;GBDF01031796;XM_013521299;XM_013521300;XM_013521303;XM_013521305;XM_013521308 XP_013376753;XP_013376754;XP_013376757;XP_013376759;XP_013376762 MODEL 8717689 protein-coding Pld4 phospholipase D family member 4 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); innate immune response (ortholog); phagocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955538 3296581 3303187 + 102029444 AGCD01071157;GBDJ01237040;XM_005410848 XP_005410905 MODEL 8941422 protein-coding Snta1 syntrophin alpha 1 ENCODES a protein that exhibits ATPase binding (ortholog); dystroglycan binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN neuromuscular junction development (ortholog); regulation of heart rate (ortholog); regulation of sodium ion transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Brugada syndrome (ortholog); dilated cardiomyopathy (ortholog); FOUND IN neuromuscular junction (ortholog); postsynaptic membrane (ortholog); protein-containing complex (ortholog) NW_004955422 27844699 27872104 + 102003779 AGCD01023337;AGCD01023338;AGCD01023339;GBBH01006232;GBDF01306217;XM_013514317 XP_013369771 MODEL 39134149 misc_rna 7SK 7SK RNA 9009436 protein-coding Rps6ka3 ribosomal protein S6 kinase A3 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955509 600415 701833 - 102007141 AGCD01065937;AGCD01065938;GBDK01197328;XM_005407812;XM_005407814;XM_005407817 XP_005407869;XP_005407871;XP_005407874 MODEL 8891186 pseudo LOC102004783 histone deacetylase 8 pseudogene NW_004955456 1940192 1940884 - 102004783 AGCD01046243 MODEL 8796883 ncrna LOC102013960 uncharacterized LOC102013960 NW_004955431 13827196 13842143 + 102013960 AGCD01030312;GBDI01357223;XR_261470 MODEL 8737485 protein-coding Wars1 tryptophanyl-tRNA synthetase 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); regulation of angiogenesis (ortholog); tryptophanyl-tRNA aminoacylation (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant distal hereditary motor neuronopathy 9 (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955438 21414878 21445417 - 102006711 AGCD01035542;AGCD01035543;AGCD01035544;GBCE01053817;XM_005390433;XM_005390434;XM_005390436;XM_013517225 XP_005390490;XP_005390491;XP_005390493;XP_013372679 MODEL 8730162 pseudo LOC102009612 zinc finger matrin-type protein 2 pseudogene NW_004955485 7634595 7636928 - 102009612 AGCD01058668 MODEL 8891070 protein-coding Ankrd16 ankyrin repeat domain 16 INVOLVED IN tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955421 22520707 22535618 - 102027989 AGCD01022138;AGCD01022139;GBDJ01350347;XM_005383851;XM_013513667;XM_013513668 XP_005383908;XP_013369121;XP_013369122 MODEL 8972611 pseudo LOC102018206 protein slowmo homolog 2 pseudogene NW_004955428 4184563 4185357 + 102018206 AGCD01027669 MODEL 8752519 protein-coding Blnk B cell linker ENCODES a protein that exhibits enzyme binding (ortholog); lipid binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 4 (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955507 2398694 2466461 - 102015652 AGCD01065587;AGCD01065588;AGCD01065589;GBBH01092683;XM_005407570;XM_013506235;XM_013506236 XP_005407627;XP_013361689;XP_013361690 MODEL 8784087 protein-coding Cd200r1 CD200 receptor 1 ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); signaling receptor activity (ortholog); INVOLVED IN heterotypic cell-cell adhesion (ortholog); negative regulation of interleukin-6 production (ortholog); negative regulation of macrophage migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955427 13143695 13148743 - 102029768 AGCD01027237;GBDK01229922;XM_013515164 XP_013370618 MODEL 9015115 pseudo LOC102006938 protein kinase C iota type pseudogene NW_004955430 13260783 13262484 + 102006938 AGCD01029529 MODEL 39134027 misc_rna 7SK 7SK RNA 8830044 protein-coding Fgf16 fibroblast growth factor 16 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of brown fat cell proliferation (ortholog); positive regulation of endothelial cell chemotaxis to fibroblast growth factor (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); disease of cellular proliferation (ortholog); syndactyly type 8 (ortholog) NW_004955557 906361 915590 + 102018534 AGCD01073267;GBCB01017510;XM_005412621 XP_005412678 MODEL 8944343 protein-coding Asic3 acid sensing ion channel subunit 3 ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion-gated channel activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of pain (ortholog); detection of mechanical stimulus involved in sensory perception (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Inflammation (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955491 5487788 5491562 + 102029189 AGCD01060484;GBDI01243786;XM_005404806;XM_005404807;XM_013504583;XM_013504584;XM_013504585 XP_005404863;XP_005404864;XP_013360037;XP_013360038;XP_013360039 MODEL 39132007 rrna 5S_rRNA 5S ribosomal RNA 8806653 ncrna LOC102013608 uncharacterized LOC102013608 NW_004955418 16719050 16722426 + 102013608 AGCD01019128;GBDI01161353;XR_001233486 MODEL 8795949 protein-coding Dleu7 deleted in lymphocytic leukemia 7 NW_004955431 4205391 4220305 - 102029215 AGCD01029989;XM_005387603 XP_005387660 MODEL 8826532 protein-coding LOC102008111 UPF0547 protein C16orf87 NW_004955420 26793782 26794800 + 102008111 AGCD01021432;XM_005383473 XP_005383530 MODEL 8913876 protein-coding CUNH5orf47 chromosome unknown C5orf47 homolog ASSOCIATED WITH thymoma (ortholog) NW_004955408 26629049 26664803 + 102004678 AGCD01008672;GBDF01085946;GBDF01085947;XM_013507163;XM_013507167 XP_013362617;XP_013362621 MODEL 9020990 protein-coding Ikzf2 IKAROS family zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cochlear outer hair cell electromotile response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN nucleus (ortholog) NW_004955457 2608892 2763036 + 102023666 AGCD01046748;AGCD01046749;GBBH01017109;XM_005396928;XM_005396929;XM_005396930;XM_005396932;XM_013520762;XM_013520763;XM_013520764;XM_013520765;XM_013520766;XM_013520767;XM_013520768;XM_013520769;XM_013520770 XP_005396985;XP_005396986;XP_005396987;XP_005396989;XP_013376216;XP_013376217;XP_013376218;XP_013376219;XP_013376220;XP_013376221;XP_013376222;XP_013376223;XP_013376224 MODEL 8775530 protein-coding LOC102004411 olfactory receptor 5D14-like NW_004955511 585205 608647 + 102004411 AGCD01066333;AGCD01066334;AGCD01066335;AGCD01066336;XM_013506359 XP_013361813 MODEL 8721160 protein-coding LOC102013213 uncharacterized LOC102013213 NW_004955538 373207 647107 + 102013213 AGCD01070995;AGCD01070996;AGCD01070997;AGCD01070998;AGCD01070999;AGCD01071000;AGCD01071001;AGCD01071002;AGCD01071003;AGCD01071004;AGCD01071005;AGCD01071006;AGCD01071007;AGCD01071008;AGCD01071009;AGCD01071010;AGCD01071011;AGCD01071012;AGCD01071013;AGCD01071014;AGCD01071015;AGCD01071016;AGCD01071017;AGCD01071018;AGCD01071019;AGCD01071020;AGCD01071021;AGCD01071022;AGCD01071023;AGCD01071024;AGCD01071025;AGCD01071026;AGCD01071027;AGCD01071028;AGCD01071029;AGCD01071030;AGCD01071031;AGCD01071032;GBDF01017551;XM_005410885 XP_005410942 MODEL 8912562 protein-coding Setd2 SET domain containing 2, histone lysine methyltransferase ENCODES a protein that exhibits alpha-tubulin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell migration involved in vasculogenesis (ortholog); coronary vasculature morphogenesis (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955420 25070626 25178410 + 102005942 AGCD01021344;AGCD01021345;AGCD01021346;GBDF01080632;GBDF01080633;XM_013513427 XP_013368881 MODEL 8700329 protein-coding LOC102007304 zinc finger protein 354B NW_004955408 1507667 1520239 - 102007304 AGCD01007961;AGCD01007962;GBCB01038326;GBCE01165511;XM_005376027;XM_013507968 XP_005376084;XP_013363422 MODEL 8804124 protein-coding Prdx6 peroxiredoxin 6 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); A2-type glycerophospholipase activity (ortholog); glutathione peroxidase activity (ortholog); INVOLVED IN bleb assembly (ortholog); cellular oxidant detoxification (ortholog); glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); chronic rhinosinusitis with nasal polyps (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosome (ortholog) NW_004955406 13717267 13728216 + 102005889 AGCD01005949;AGCD01005950;GBDK01014441;XM_005374867 XP_005374924 MODEL 8743226 ncrna LOC102022300 uncharacterized LOC102022300 NW_004955421 10315563 10318178 + 102022300 AGCD01021873;GBCQ01059920;XR_260792 MODEL 8993491 ncrna LOC102010017 uncharacterized LOC102010017 NW_004955451 14756261 14759461 - 102010017 AGCD01043570;GBDK01285033;XR_262608 MODEL 8884861 ncrna LOC102018207 uncharacterized LOC102018207 NW_004955508 4313935 4333410 - 102018207 AGCD01065865;AGCD01065866;GBDJ01266761;XR_001231653 MODEL 8978227 protein-coding LOC102004028 uncharacterized PE-PGRS family protein PE_PGRS3-like NW_004955451 11193050 11196987 + 102004028 AGCD01043342;GBCE01114159;XM_005394131;XM_013519091;XM_013519092 XP_005394188;XP_013374545;XP_013374546 MODEL 8803705 protein-coding Aplp1 amyloid beta precursor like protein 1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); alpha-2B adrenergic receptor binding (ortholog); alpha-2C adrenergic receptor binding (ortholog); INVOLVED IN cellular response to norepinephrine stimulus (ortholog); cytosolic mRNA polyadenylation (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955468 2694286 2703658 - 102018378 AGCD01051833;GBCQ01114642;GBDF01190756;XM_005400298 XP_005400355 MODEL 9063648 ncrna LOC102008856 uncharacterized LOC102008856 NW_004955484 4129624 4136398 + 102008856 AGCD01058202;GBDF01220583;XR_001231058;XR_001231059;XR_001231060;XR_001231061;XR_263884 MODEL 39134319 misc_rna 7SK 7SK RNA 9029465 ncrna LOC102010821 uncharacterized LOC102010821 NW_004955505 3545137 3556925 + 102010821 AGCD01065031;GBBH01131759;XR_264306 MODEL 8798770 protein-coding Cep41 centrosomal protein 41 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955479 11025320 11071256 - 102018394 AGCD01056570;AGCD01056571;GBBH01036642;XM_005402444;XM_013503299;XM_013503300;XM_013503301 XP_005402501;XP_013358753;XP_013358754;XP_013358755 MODEL 8902207 protein-coding Atp6v0d2 ATPase H+ transporting V0 subunit d2 ASSOCIATED WITH cervical cancer (ortholog); ovarian cyst (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955417 3778587 3832973 + 102005253 AGCD01017925;AGCD01017926;GBDF01042563;XM_013512849;XM_013512850;XM_013512851;XM_013512852 XP_013368303;XP_013368304;XP_013368305;XP_013368306 MODEL 39132248 rrna 5S_rRNA 5S ribosomal RNA 9012396 protein-coding Aen apoptosis enhancing nuclease ENCODES a protein that exhibits DNA exonuclease activity (ortholog); exonuclease activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); response to ionizing radiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955416 16328655 16338069 - 102007548 AGCD01017352;GBBH01051516;XM_005381572 XP_005381629 MODEL 8713180 pseudo LOC102005852 60S ribosomal protein L21 pseudogene NW_004955565 1247877 1249322 - 102005852 AGCD01074307 MODEL 8940011 pseudo LOC102002996 mitochondrial fission factor-like NW_004955455 354378 355152 + 102002996 AGCD01045556 MODEL 8803581 protein-coding LOC102011614 translation initiation factor IF-2-like NW_004955451 13182675 13184330 - 102011614 AGCD01043458;GBDK01206490;XM_005394257;XR_001235982 XP_005394314 MODEL 8840224 protein-coding Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 ENCODES a protein that exhibits protein-lysine-acetyltransferase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); cytosol (ortholog) NW_004955458 3352442 3356224 + 102020885 AGCD01047296;GBDF01048251;XM_005397258 XP_005397315 MODEL 8921979 protein-coding Btf3l4 basic transcription factor 3 like 4 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955464 7044634 7069593 - 102022796 AGCD01050053;GBCE01116828;XM_005398593;XM_005398594;XM_005398595 XP_005398650;XP_005398651;XP_005398652 MODEL 8992459 ncrna LOC102012023 uncharacterized LOC102012023 NW_004955437 2178719 2183875 + 102012023 AGCD01034261;AGCD01034262;GBDF01160448;XR_001235086;XR_001235087;XR_001235088 MODEL 8727717 protein-coding Aldh1l1 aldehyde dehydrogenase 1 family member L1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NADP+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); folic acid metabolic process (ortholog); NADPH regeneration (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955421 21420264 21506004 - 102018736 AGCD01022109;AGCD01022110;AGCD01022111;GBDJ01084830;XM_005383830 XP_005383887 MODEL 8842945 protein-coding Abraxas2 abraxas 2, BRISC complex subunit ENCODES a protein that exhibits microtubule binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); cellular response to freezing (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN BRISC complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955477 2782604 2811452 + 102005706 AGCD01055533;GBDF01277348;XM_005401983 XP_005402040 MODEL 8971611 protein-coding LOC102008488 palladin NW_004955403 37248908 37286650 - 102008488 AGCD01002565;GBCQ01040632;GBDJ01020208;XM_013513428 XP_013368882 MODEL 8994263 protein-coding Cdhr4 cadherin related family member 4 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955532 1644995 1690897 - 102017697 AGCD01070196;AGCD01070197;GBBH01004272;XM_005410215;XM_005410216;XM_005410217;XM_013507603 XP_005410272;XP_005410273;XP_005410274;XP_013363057 MODEL 8724839 protein-coding Cks2 CDC28 protein kinase regulatory subunit 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cell population proliferation (ortholog); meiosis I (ortholog); mitotic cell cycle phase transition (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955515 2731210 2736296 - 102017372 AGCD01067260;GBDF01007976;XM_005408880 XP_005408937 MODEL 8887155 pseudo LOC102013961 F-box-like/WD repeat-containing protein TBL1XR1 pseudogene NW_004955431 4870896 4884687 + 102013961 AGCD01030014 MODEL 39134150 misc_rna 7SK 7SK RNA 8928099 protein-coding Epcip exosomal polycystin 1 interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog); FOUND IN extracellular exosome (ortholog); migrasome (ortholog); vesicle (ortholog) NW_004955407 32229108 32249097 - 102017952 AGCD01007671;GBDJ01114206;XM_005375674 XP_005375731 MODEL 39133725 misc_rna 7SK 7SK RNA 8828688 protein-coding Slc2a8 solute carrier family 2 member 8 ENCODES a protein that exhibits D-glucose binding (ortholog); D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); dehydroascorbic acid transport (ortholog); fructose transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog); synaptic vesicle (ortholog) NW_004955419 1177752 1187157 - 102003967 AGCD01019644;GBDI01010591;XM_005382427;XM_005382428;XM_005382429 XP_005382484;XP_005382485;XP_005382486 MODEL 9011623 pseudo LOC102004784 40S ribosomal protein S8 pseudogene NW_004955457 6388635 6389329 - 102004784 AGCD01046838 MODEL 9053487 protein-coding Wars2 tryptophanyl tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits tryptophan-tRNA ligase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); vasculogenesis (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); hyperinsulinemic hypoglycemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955435 22032230 22115138 - 102014082 AGCD01033489;AGCD01033490;AGCD01033491;GBCB01110388;XM_005389073;XM_005389075 XP_005389130;XP_005389132 MODEL 8847933 protein-coding CUNH6orf118 chromosome unknown C6orf118 homolog ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955439 16386460 16404123 + 102004425 AGCD01036022;GBDF01046521;XM_005390678;XM_005390680;XM_013517417;XR_001235217;XR_261993 XP_005390735;XP_005390737;XP_013372871 MODEL 8793972 protein-coding LOC102009615 translation initiation factor IF-2-like NW_004955420 29366247 29393153 - 102009615 AGCD01021498;AGCD01021499;GBBH01125290;XM_013513409;XR_001233708 XP_013368863 MODEL 8866396 protein-coding LOC102013215 olfactory receptor 12-like NW_004955542 1185898 1186848 - 102013215 AGCD01071490;XM_005411242 XP_005411299 MODEL 8952289 protein-coding Adad2 adenosine deaminase domain containing 2 INVOLVED IN spermatid development (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955564 113943 120083 - 102018781 AGCD01074187;GBDF01007545;XM_005413219;XM_013509204 XP_005413276;XP_013364658 MODEL 8723867 protein-coding Cd207 CD207 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); INVOLVED IN defense response to virus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955424 14355739 14361326 + 102030441 AGCD01024652;GBDF01019779;XM_005385607 XP_005385664 MODEL 8952634 pseudo LOC102006941 eukaryotic translation initiation factor 5A-2 pseudogene NW_004955433 470536 470996 - 102006941 AGCD01031323 MODEL 9056910 protein-coding Asic4 acid sensing ion channel subunit family member 4 ENCODES a protein that exhibits pH-gated sodium channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebrotendinous xanthomatosis (ortholog); lung cancer (ortholog) NW_004955453 13937745 13961664 - 102030495 AGCD01044855;GBDI01164661;XM_005395514 XP_005395571 MODEL 9055192 protein-coding Ankrd17 ankyrin repeat domain 17 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blood vessel maturation (ortholog); defense response to bacterium (ortholog); innate immune response (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955447 259654 376147 + 102018039 AGCD01040450;GBDK01196552;XM_005392762;XM_005392763;XM_005392764;XM_005392765;XM_005392766;XM_005392767 XP_005392819;XP_005392820;XP_005392821;XP_005392822;XP_005392823;XP_005392824 MODEL 9002789 protein-coding Fgf17 fibroblast growth factor 17 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hypogonadotropic hypogonadism 20 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog) NW_004955403 45544114 45548659 + 102030262 AGCD01002820;GBDF01213823;XM_005373644;XM_005373645 XP_005373701;XP_005373702 MODEL 8771683 protein-coding Rbm39 RNA binding motif protein 39 ENCODES a protein that exhibits RS domain binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); protein-containing complex (ortholog) NW_004955422 25719771 25755757 + 102005389 AGCD01023264;AGCD01023265;AGCD01023266;GBBH01034224;XM_005384769;XM_005384770;XM_005384771;XM_005384772 XP_005384826;XP_005384827;XP_005384828;XP_005384829 MODEL 39132008 rrna 5S_rRNA 5S ribosomal RNA 8986111 protein-coding LOC102010825 olfactory receptor 4D6 NW_004955511 3967106 3968050 + 102010825 AGCD01066484;XM_005408062 XP_005408119 MODEL 8772909 protein-coding Pld5 phospholipase D family member 5 ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 5810286 5994601 - 102027264 AGCD01005742;AGCD01005743;AGCD01005744;GBBH01226778;XM_013520242;XM_013520247 XP_013375696;XP_013375701 MODEL 10093974 protein-coding LOC106150326 uncharacterized LOC106150326 NW_004955472 7377896 7382389 + 106150326 AGCD01053621;AGCD01053622;GBDJ01034346;XM_013522929 XP_013378383 MODEL 9065896 pseudo LOC102008112 amyloid beta A4 precursor protein-binding family B member 2-like NW_004955488 9036407 9057644 + 102008112 AGCD01059741;AGCD01059742;AGCD01059743 MODEL 8752072 protein-coding Atp6v0e1 ATPase H+ transporting V0 subunit e1 ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); response to amino acid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN proton-transporting V-type ATPase complex (ortholog) NW_004955408 25667703 25703550 + 102028164 AGCD01008649;AGCD01008650;AGCD01008651;GBBH01001756;XM_005376345 XP_005376402 MODEL 8956805 protein-coding Sntb1 syntrophin beta 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN protein-containing complex (ortholog); synapse (ortholog) NW_004955417 25906013 26128134 - 102019501 AGCD01018495;AGCD01018496;AGCD01018497;AGCD01018498;GBDI01120696;XM_013512818 XP_013368272 MODEL 8987453 ncrna LOC102004412 uncharacterized LOC102004412 NW_004955513 2245105 2262741 + 102004412 AGCD01066871;AGCD01066872;GBDF01085197;XR_001231734;XR_264457 MODEL 8971412 protein-coding Ikzf3 IKAROS family zinc finger 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN B cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955451 14483669 14571108 - 102003825 AGCD01043556;AGCD01043557;AGCD01043558;GBDF01181093;XM_013519415;XM_013519416;XM_013519417;XM_013519418 XP_013374869;XP_013374870;XP_013374871;XP_013374872 MODEL 8728817 pseudo LOC102007307 40S ribosomal protein S25-like NW_004955408 19623818 19624387 - 102007307 AGCD01008529 MODEL 8745727 protein-coding Trir telomerase RNA component interacting RNase ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-3' exonuclease activity (ortholog); protein serine/threonine phosphatase inhibitor activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric (ortholog); rRNA catabolic process (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955415 31831093 31834796 - 102020242 AGCD01016698;GBDK01012972;XM_005381022 XP_005381079 MODEL 39134028 misc_rna 7SK 7SK RNA 8716155 protein-coding LOC102010019 phospholipase A2, membrane associated-like NW_004955452 597005 599899 - 102010019 AGCD01043819;XM_005395284 XP_005395341 MODEL 8769781 protein-coding Catsper4 cation channel sperm associated 4 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sodium ion transport (ortholog); sperm capacitation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog); CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955439 21098751 21111906 + 102015772 AGCD01036138;GBDF01045912;XM_005390713 XP_005390770 MODEL 8744412 protein-coding LOC102018211 WD repeat-containing protein 49-like NW_004955431 14732986 14816717 - 102018211 AGCD01030338;AGCD01030339;AGCD01030340;AGCD01030341;GBDF01022038;XM_013515901 XP_013371355 MODEL 8702358 protein-coding LOC102013611 olfactory receptor 14K1-like NW_004955418 30363345 30372168 + 102013611 AGCD01019514;AGCD01019515;XM_013512882 XP_013368336 MODEL 8734258 protein-coding Abt1 activator of basal transcription 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); spinal cord motor neuron differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Disease Progression (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955483 307893 310932 - 102010587 AGCD01057606;GBBH01228186;XM_005403274 XP_005403331 MODEL 39134334 misc_rna 7SK 7SK RNA 8913623 protein-coding Aplp2 amyloid beta precursor like protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); extracellular matrix organization (ortholog); forebrain development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); spine apparatus (ortholog) NW_004955412 31043320 31075617 + 102020897 AGCD01013323;GBCQ01009463;XM_005378559;XM_005378560;XM_005378561;XM_005378562 XP_005378616;XP_005378617;XP_005378618;XP_005378619 MODEL 9024809 protein-coding Rps6ka4 ribosomal protein S6 kinase A4 ENCODES a protein that exhibits ATP binding (ortholog); histone H3S10 kinase activity (ortholog); histone H3S28 kinase activity (ortholog); INVOLVED IN interleukin-1-mediated signaling pathway (ortholog); intracellular signal transduction (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955422 20726286 20736841 - 102009515 AGCD01023086;GBCE01115327;XM_005384593 XP_005384650 MODEL 8830979 protein-coding Cep43 centrosomal protein 43 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); positive regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955439 15029485 15059076 - 102026910 AGCD01035997;AGCD01035998;GBBH01037133;GBDK01027317;XM_005390729;XM_013517401;XR_001235215 XP_005390786;XP_013372855 MODEL 9010466 protein-coding Afap1 actin filament associated protein 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); SH2 domain binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); lactation (ortholog); lipid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); plasma membrane (ortholog) NW_004955514 2934115 3050347 + 102013642 AGCD01067090;AGCD01067091;AGCD01067092;GBDF01082445;XM_013506784;XM_013506786;XM_013506787 XP_013362238;XP_013362240;XP_013362241 MODEL 8825130 protein-coding Epdr1 ependymin related 1 ENCODES a protein that exhibits ganglioside GM1 binding (ortholog); identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN myofibroblast contraction (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); lysosomal lumen (ortholog); lysosome (ortholog) NW_004955460 5612589 5650222 - 102025881 AGCD01048455;AGCD01048456;GBDJ01134723;XM_005397745;XM_005397746 XP_005397802;XP_005397803 MODEL 8790166 protein-coding Cep44 centrosomal protein 44 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); centriole-centriole cohesion (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); high grade glioma (ortholog); lymphoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955403 32780077 32799015 - 102022990 AGCD01002441;GBDJ01423256;XM_005373537;XM_013513262;XM_013513268;XM_013513270;XM_013513273;XM_013513277 XP_005373594;XP_013368716;XP_013368722;XP_013368724;XP_013368727;XP_013368731 MODEL 8840785 protein-coding LOC102013216 uncharacterized LOC102013216 NW_004955438 14271926 14297748 + 102013216 AGCD01035336;AGCD01035337;GBDF01294416;XM_005390442 XP_005390499 MODEL 8919708 protein-coding LOC102012027 uncharacterized LOC102012027 NW_004955438 16193937 16196191 - 102012027 AGCD01035397;GBDI01015943;XM_013517279 XP_013372733 MODEL 8990979 protein-coding Cd22 CD22 molecule ENCODES a protein that exhibits CD4 receptor binding (ortholog); protein phosphatase binding (ortholog); sialic acid binding (ortholog); INVOLVED IN B cell activation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); diffuse large B-cell lymphoma (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); external side of plasma membrane (ortholog) NW_004955468 4609601 4622601 + 102016690 AGCD01051918;GBDI01170491;XM_005400044;XM_005400045;XM_005400046;XM_005400047;XM_005400048;XM_005400049;XM_013522532 XP_005400101;XP_005400102;XP_005400103;XP_005400104;XP_005400105;XP_005400106;XP_013377986 MODEL 8723968 pseudo LOC102008864 solute carrier family 25 member 36-like NW_004955421 22468586 22469764 + 102008864 AGCD01022136 MODEL 8722772 protein-coding Aldh1l2 aldehyde dehydrogenase 1 family member L2 ENCODES a protein that exhibits formyltetrahydrofolate dehydrogenase activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); fatty acid beta-oxidation (ortholog); folic acid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrion (ortholog) NW_004955405 39387949 39437282 - 102015919 AGCD01005499;AGCD01005500;GBDI01245189;XM_005374604 XP_005374661 MODEL 9067683 protein-coding Fgf18 fibroblast growth factor 18 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chondrocyte development (ortholog); endochondral ossification (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Diaphragmatic Hernia (ortholog); Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955408 24225459 24260057 + 102021852 AGCD01008604;GBBH01096243;XM_005376329 XP_005376386 MODEL 39134151 misc_rna 7SK 7SK RNA 39133726 misc_rna 7SK 7SK RNA 39134335 misc_rna 7SK 7SK RNA 8897119 ncrna LOC102008489 uncharacterized LOC102008489 NW_004956123 1825 3767 - 102008489 AGCD01079091;GBDF01090413;XR_001232607;XR_265205 MODEL 39132249 rrna 5S_rRNA 5S ribosomal RNA 8943198 pseudo LOC102004786 mitochondrial pyruvate carrier 2 pseudogene NW_004955408 33338349 33338731 + 102004786 AGCD01008867 MODEL 8888986 protein-coding Cdhr5 cadherin related family member 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN brush border assembly (ortholog); cell adhesion (ortholog); intermicrovillar adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955476 11435677 11442338 + 102014352 AGCD01055458;GBCQ01011365;XM_005401828;XM_005401829 XP_005401885;XP_005401886 MODEL 9061970 protein-coding Slc2a9 solute carrier family 2 member 9 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); fructose transmembrane transport (ortholog); urate metabolic process (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); nuclear envelope (ortholog) NW_004955514 5479585 5625328 - 102029652 AGCD01067155;AGCD01067156;AGCD01067157;GBDI01170943;XM_005408843 XP_005408900 MODEL 8861262 pseudo LOC102003001 E3 SUMO-protein ligase PIAS2 pseudogene NW_004955409 16215943 16246882 + 102003001 AGCD01009715;AGCD01009716;AGCD01009717 MODEL 9057733 protein-coding LOC102005856 cytochrome P450 3A9-like NW_004955573 976002 1018678 - 102005856 AGCD01075011;AGCD01075012;AGCD01075013;GBCQ01036396;XM_005413764;XM_013509445 XP_005413821;XP_013364899 MODEL 8770468 protein-coding Dlg1 discs large MAGUK scaffold protein 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); kinesin binding (ortholog); INVOLVED IN actin filament organization (ortholog); amyloid precursor protein metabolic process (ortholog); astral microtubule organization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955420 13068289 13273805 - 102018402 AGCD01020914;AGCD01020915;AGCD01020916;AGCD01020917;AGCD01020918;AGCD01020919;GBCB01057993;XM_005383157;XM_005383158;XM_005383159;XM_005383163;XM_005383165;XM_005383166;XM_005383167;XM_013513450;XM_013513452;XM_013513453 XP_005383214;XP_005383215;XP_005383216;XP_005383220;XP_005383222;XP_005383223;XP_005383224;XP_013368904;XP_013368906;XP_013368907 MODEL 8795497 ncrna LOC102009616 uncharacterized LOC102009616 NW_004955487 8301569 8308007 + 102009616 AGCD01059433;GBDF01280847;XR_263987 MODEL 8845910 pseudo LOC102022301 ubiquitin carboxyl-terminal hydrolase 44-like NW_004955489 6080515 6085343 - 102022301 AGCD01059957 MODEL 8821803 ncrna LOC102008117 uncharacterized LOC102008117 NW_004955493 654340 655511 - 102008117 AGCD01060859;GBDK01039914;XR_264062 MODEL 8793469 protein-coding Bloc1s2 biogenesis of lysosomal organelles complex 1 subunit 2 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); transcription factor binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); centrosome (ortholog) NW_004955507 6138511 6144823 - 102021692 AGCD01065697;GBDI01131466;XM_005407689;XM_005407690;XR_264384 XP_005407746;XP_005407747 MODEL 8791092 ncrna LOC102010020 uncharacterized LOC102010020 NW_004955453 14159202 14163339 + 102010020 AGCD01044858;GBDF01249804;XR_001236190;XR_262732 MODEL 8958354 protein-coding Trit1 tRNA isopentenyltransferase 1 ENCODES a protein that exhibits tRNA dimethylallyltransferase activity (ortholog); INVOLVED IN mitochondrial tRNA modification (ortholog); tRNA modification (ortholog); ASSOCIATED WITH capillary hemangioma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955452 17330446 17378579 - 102029821 AGCD01044550;AGCD01044551;AGCD01044552;GBDK01277036;XM_005395267;XM_005395268;XM_013519693 XP_005395324;XP_005395325;XP_013375147 MODEL 8742636 protein-coding Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); protein-L-histidine N-tele-methyltransferase activity (ortholog); INVOLVED IN actin filament organization (ortholog); positive regulation of muscle cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955438 20754593 20826570 - 102028681 AGCD01035521;AGCD01035522;AGCD01035523;GBDF01008952;XM_005390415;XM_005390417 XP_005390472;XP_005390474 MODEL 8769283 protein-coding Btg1 BTG anti-proliferation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); disease of cellular proliferation (ortholog); multiple myeloma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955405 29206889 29209407 - 102021082 AGCD01005248;GBCB01021122;XM_005374452 XP_005374509 MODEL 8742057 protein-coding LOC102007312 estradiol 17 beta-dehydrogenase 5-like NW_004955463 77186 79987 - 102007312 AGCD01049471;GBDJ01183249;XM_005398329 XP_005398386 MODEL 8978794 protein-coding Preb prolactin regulatory element binding ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN COPII vesicle coat assembly (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog); endoplasmic reticulum membrane (ortholog); nucleus (ortholog) NW_004955469 9097579 9101361 - 102020649 AGCD01052489;GBCQ01068510;XM_005400456;XM_005400457 XP_005400513;XP_005400514 MODEL 8707232 protein-coding Asic5 acid sensing ion channel subunit family member 5 ENCODES a protein that exhibits bile acid-gated sodium channel activity (ortholog); ligand-gated sodium channel activity (ortholog); proton channel activity (ortholog); INVOLVED IN neuronal action potential (ortholog); sodium ion import across plasma membrane (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Habitual Abortions (ortholog); thymoma (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955471 11262213 11287720 + 102014131 AGCD01053251;XM_005400949 XP_005401006 MODEL 8702021 protein-coding Ankrd2 ankyrin repeat domain 2 ENCODES a protein that exhibits chromatin binding (ortholog); protein kinase B binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of myoblast differentiation (ortholog); negative regulation of myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955507 3678009 3686967 + 102028215 AGCD01065632;GBCQ01044645;XM_005407614;XR_264378 XP_005407671 MODEL 8777040 pseudo LOC102011616 transcription termination factor 2 pseudogene NW_004955403 54518608 54521373 - 102011616 AGCD01003099 MODEL 8945148 ncrna LOC102013615 uncharacterized LOC102013615 NW_004955420 27425185 27435635 + 102013615 AGCD01021453;GBDF01251108;XR_260762 MODEL 8983370 protein-coding Was WASP actin nucleation promoting factor ENCODES a protein that exhibits identical protein binding (ortholog); phospholipase binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin filament-based movement (ortholog); actin polymerization or depolymerization (ortholog); ASSOCIATED WITH blood coagulation disease (ortholog); Cytomegalovirus Infections (ortholog); disease by infectious agent (ortholog); FOUND IN actin filament (ortholog); cell-cell junction (ortholog); cytosol (ortholog) NW_004955543 243618 253489 + 102022858 AGCD01071569;GBBH01116435;XM_005411273 XP_005411330 MODEL 8787894 pseudo LOC102013965 prostaglandin reductase 1 pseudogene NW_004955530 3388161 3388865 - 102013965 AGCD01069951 MODEL 8905735 protein-coding Apmap adipocyte plasma membrane associated protein ENCODES a protein that exhibits arylesterase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) NW_004955415 31089413 31108657 - 102009044 AGCD01016669;GBDF01228097;XM_005380982 XP_005381039 MODEL 39134152 misc_rna 7SK 7SK RNA 8888481 protein-coding Pld6 phospholipase D family member 6 ENCODES a protein that exhibits cardiolipin phospholipase D activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); mitochondrial fusion (ortholog); P granule organization (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH male infertility (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN Golgi apparatus (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955577 698741 702977 + 102025634 AGCD01075411;AGCD01075412;GBCB01110589;XM_013509636 XP_013365090 MODEL 8910607 protein-coding Atp6v0e2 ATPase H+ transporting V0 subunit e2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN synaptic vesicle membrane (ortholog) NW_004955491 4929405 4935247 + 102017780 AGCD01060465;GBDJ01237248;XM_005404765 XP_005404822 MODEL 8931849 protein-coding Sntb2 syntrophin beta 2 PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); Mesothelioma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955484 7391076 7489357 - 102005809 AGCD01058330;AGCD01058331;AGCD01058332;AGCD01058333;GBBH01076692;XM_013503934 XP_013359388 MODEL 8723178 ncrna LOC102004029 uncharacterized LOC102004029 NW_004955451 12567051 12574581 - 102004029 AGCD01043406;AGCD01043407;AGCD01043408;GBDF01043422;XR_001235955 MODEL 39134029 misc_rna 7SK 7SK RNA 8944498 ncrna LOC102006949 uncharacterized LOC102006949 NW_004955528 1918029 1919886 + 102006949 AGCD01069576;GBCQ01125233;XR_264700 MODEL 8975897 protein-coding Cep55 centrosomal protein 55 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cranial skeletal system development (ortholog); establishment of protein localization (ortholog); midbody abscission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955507 2384 25105 + 102028113 AGCD01065457;GBDF01088210;XM_005407513;XM_005407514 XP_005407570;XP_005407571 MODEL 8938823 protein-coding Catsperb cation channel sperm associated auxiliary subunit beta ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); male infertility (ortholog); FOUND IN CatSper complex (ortholog); cilium (ortholog); sperm principal piece (ortholog) NW_004955438 13822642 13978777 - 102012246 AGCD01035313;AGCD01035314;AGCD01035315;AGCD01035316;AGCD01035317;AGCD01035318;AGCD01035319;AGCD01035320;AGCD01035321;AGCD01035322;AGCD01035323;AGCD01035324;AGCD01035325;AGCD01035326;GBDF01004774;XM_013517143;XM_013517144 XP_013372597;XP_013372598 MODEL 39132009 rrna 5S_rRNA 5S ribosomal RNA 8972409 protein-coding Clasp1 cytoplasmic linker associated protein 1 ENCODES a protein that exhibits dystroglycan binding (ortholog); kinetochore binding (ortholog); microtubule binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); basement membrane organization (ortholog); cell division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); cervical cancer (ortholog); FOUND IN basal cortex (ortholog); cell cortex (ortholog); centrosomal corona (ortholog) NW_004955459 8382671 8628048 + 102013479 AGCD01048142;AGCD01048143;GBDI01181231;XM_005397639;XM_005397640;XM_005397643;XM_005397644;XM_005397645;XM_005397646;XM_013521069;XM_013521070;XM_013521071;XM_013521072;XM_013521073;XM_013521074;XM_013521075;XM_013521076 XP_005397696;XP_005397697;XP_005397700;XP_005397701;XP_005397702;XP_005397703;XP_013376523;XP_013376524;XP_013376525;XP_013376526;XP_013376527;XP_013376528;XP_013376529;XP_013376530 MODEL 8870099 protein-coding Abtb1 ankyrin repeat and BTB domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955429 15964584 15968604 - 102029098 AGCD01028824;GBDJ01090295;XM_005387052 XP_005387109 MODEL 8824745 protein-coding LOC102013616 PRAME family member 12-like NW_004955486 324217 327218 + 102013616 AGCD01058836;XM_013504136 XP_013359590 MODEL 8940843 protein-coding Rps6ka5 ribosomal protein S6 kinase A5 ENCODES a protein that exhibits ATP binding (ortholog); histone H2AS1 kinase activity (ortholog); histone H3S10 kinase activity (ortholog); INVOLVED IN interleukin-1-mediated signaling pathway (ortholog); intracellular signal transduction (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 13218451 13392080 - 102015148 AGCD01035281;AGCD01035282;AGCD01035283;AGCD01035284;AGCD01035285;GBDI01209041;XM_005390286;XM_013517243;XM_013517244 XP_005390343;XP_013372697;XP_013372698 MODEL 8827330 protein-coding Adam10 ADAM metallopeptidase domain 10 ENCODES a protein that exhibits endopeptidase activity (ortholog); metallodipeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN adherens junction organization (ortholog); amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Alzheimer's disease 18 (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955450 15853372 15927966 + 102014962 AGCD01042822;AGCD01042823;AGCD01042824;AGCD01042825;AGCD01042826;GBBH01091689;GBDF01153614;XM_013518929 XP_013374383 MODEL 8751269 protein-coding Rbm41 RNA binding motif protein 41 ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955490 8912616 8974748 + 102021135 AGCD01060298;GBBH01107168;XM_005404705;XM_005404706 XP_005404762;XP_005404763 MODEL 9019568 protein-coding CUNH6orf132 chromosome unknown C6orf132 homolog ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955437 8337580 8362873 - 102021914 AGCD01034486;AGCD01034487;GBCQ01150917;XM_005389717;XM_013516785 XP_005389774;XP_013372239 MODEL 39132250 rrna 5S_rRNA 5S ribosomal RNA 8881797 pseudo LOC102004416 RE1-silencing transcription factor-like NW_004955515 4007565 4012720 + 102004416 AGCD01067313 MODEL 8731327 pseudo LOC102003005 cTAGE family member 5-like NW_004955463 249195 252486 + 102003005 AGCD01049479 MODEL 9040810 protein-coding Cdin1 CDAN1 interacting nuclease 1 INVOLVED IN erythrocyte differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congenital dyserythropoietic anemia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955416 3805968 4014328 + 102003651 AGCD01016878;GBDF01013590;XM_005381186;XM_013512674;XM_013512675;XM_013512676 XP_005381243;XP_013368128;XP_013368129;XP_013368130 MODEL 8908274 protein-coding Atp6v1a ATPase H+ transporting V1 subunit A ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IID (ortholog); brain disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955427 13868683 13922028 + 102005949 AGCD01027260;AGCD01027261;AGCD01027262;GBDF01087139;XM_005386402;XM_013515121 XP_005386459;XP_013370575 MODEL 9001004 ncrna LOC102018213 uncharacterized LOC102018213 NW_004955433 14380516 14385234 + 102018213 AGCD01031721;GBDF01051190;XR_261596 MODEL 8840768 protein-coding Btg2 BTG anti-proliferation factor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); associative learning (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); brain ischemia (ortholog); breast cancer (ortholog) NW_004955406 39303221 39307308 + 102011732 AGCD01006625;GBCE01078173;XM_005375265 XP_005375322 MODEL 8830696 pseudo LOC102012028 pre-mRNA 3' end processing protein WDR33 pseudogene NW_004955439 20471999 20472958 - 102012028 AGCD01036114 MODEL 8952687 ncrna LOC102008867 uncharacterized LOC102008867 NW_004955494 7040036 7040325 - 102008867 AGCD01061545;GBDF01288756;XR_264117 MODEL 8954832 protein-coding Dlg2 discs large MAGUK scaffold protein 2 ENCODES a protein that exhibits kinase binding (ortholog); PDZ domain binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to potassium ion (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN axon initial segment (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955414 7247248 9171664 + 102022378 AGCD01014951;AGCD01014952;AGCD01014953;AGCD01014954;AGCD01014955;AGCD01014956;AGCD01014957;AGCD01014958;AGCD01014959;AGCD01014960;AGCD01014961;AGCD01014962;AGCD01014963;AGCD01014964;AGCD01014965;AGCD01014966;AGCD01014967;AGCD01014968;AGCD01014969;AGCD01014970;AGCD01014971;AGCD01014972;AGCD01014973;AGCD01014974;AGCD01014975;AGCD01014976;AGCD01014977;AGCD01014978;AGCD01014979;AGCD01014980;AGCD01014981;AGCD01014982;AGCD01014983;AGCD01014984;AGCD01014985;AGCD01014986;AGCD01014987;AGCD01014988;AGCD01014989;AGCD01014990;AGCD01014991;AGCD01014992;AGCD01014993;AGCD01014994;AGCD01014995;AGCD01014996;AGCD01014997;AGCD01014998;AGCD01014999;AGCD01015000;AGCD01015001;AGCD01015002;AGCD01015003;AGCD01015004;AGCD01015005;AGCD01015006;AGCD01015007;AGCD01015008;AGCD01015009;AGCD01015010;GBDK01207539;XM_005379786;XM_005379787;XM_005379790;XM_013511774;XM_013511775;XM_013511776;XM_013511777;XM_013511778;XM_013511779;XM_013511780;XM_013511781;XM_013511782;XM_013511783;XM_013511784;XM_013511785;XM_013511786;XM_013511787;XM_013511788;XM_013511789;XM_013511790;XM_013511791 XP_005379843;XP_005379844;XP_005379847;XP_013367228;XP_013367229;XP_013367230;XP_013367231;XP_013367232;XP_013367233;XP_013367234;XP_013367235;XP_013367236;XP_013367237;XP_013367238;XP_013367239;XP_013367240;XP_013367241;XP_013367242;XP_013367243;XP_013367244;XP_013367245 MODEL 8885611 protein-coding LOC102010827 olfactory receptor 10V1 NW_004955511 4140948 4141914 - 102010827 AGCD01066493;XM_005408271 XP_005408328 MODEL 8928916 protein-coding Asip agouti signaling protein ENCODES a protein that exhibits melanocortin receptor binding (ortholog); receptor antagonist activity (ortholog); type 1 melanocortin receptor binding (ortholog); INVOLVED IN adult feeding behavior (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; melanocortin system pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); coat/hair pigmentation trait (ortholog); dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 27021810 27150339 - 102024692 AGCD01023311;AGCD01023312;AGCD01023313;GBDJ01318713;XM_005384833;XM_005384834 XP_005384890;XP_005384891 MODEL 8729710 protein-coding Fgf19 fibroblast growth factor 19 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); heart development (ortholog); negative regulation of bile acid biosynthetic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); cholangiocarcinoma (ortholog); colitis (ortholog) NW_004955422 16415880 16419528 + 102017135 AGCD01022898;GBDJ01222896;XM_005384961 XP_005385018 MODEL 8756415 protein-coding Ankrd22 ankyrin repeat domain 22 INVOLVED IN calcium ion import (ortholog); cell population proliferation (ortholog); immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955425 4123004 4149484 + 102020463 AGCD01025310;GBDK01380102;XM_013514893 XP_013370347 MODEL 9049996 protein-coding Wasf1 WASP family member 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog); mitochondrial outer membrane (ortholog) NW_004955411 34893287 34966670 - 102022176 AGCD01012417;AGCD01012418;GBDF01123264;XM_005377883;XM_005377884;XM_013510825 XP_005377940;XP_005377941;XP_013366279 MODEL 39133744 misc_rna 7SK 7SK RNA 9059477 protein-coding Trmo tRNA methyltransferase O ENCODES a protein that exhibits tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955419 27553040 27568417 + 102020012 AGCD01020441;GBCQ01059248;XM_013513222;XM_013513223 XP_013368676;XP_013368677 MODEL 8873618 pseudo LOC102008491 60S ribosomal protein L24 pseudogene NW_004955403 25635577 25636027 + 102008491 AGCD01002291 MODEL 8967272 ncrna LOC102004791 uncharacterized LOC102004791 NW_004955411 1297405 1299563 + 102004791 AGCD01011476;GBDF01076094;XR_001232844;XR_259909 MODEL 8983867 pseudo LOC102009624 nuclear receptor-binding factor 2 pseudogene NW_004955495 3092379 3093300 + 102009624 AGCD01061822 MODEL 9059505 protein-coding LOC102022303 spermatogenesis-associated protein 31E1-like NW_004955491 31398 33727 - 102022303 AGCD01060313;XM_005404875 XP_005404932 MODEL 10313172 ncrna LOC106150327 uncharacterized LOC106150327 NW_004955472 2834860 2839447 + 106150327 AGCD01053492;GBCE01043397;XR_001237070;XR_001237071 MODEL 8921301 ncrna LOC102008122 uncharacterized LOC102008122 NW_004955423 9990855 9994777 + 102008122 AGCD01023668;GBDF01225396;XR_001234046 MODEL 8796164 protein-coding LOC102013217 solute carrier family 22 member 1 NW_004955439 20691662 20716577 - 102013217 AGCD01036124;GBDI01310983;XM_005390705;XM_013517430 XP_005390762;XP_013372884 MODEL 9012088 protein-coding Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); transmembrane protein transporter activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); blood coagulation (ortholog); ASSOCIATED WITH Albinism (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955555 2183752 2186154 + 102022235 AGCD01073131;AGCD01073132;GBBH01208027;GBDK01228953;XM_013508764 XP_013364218 MODEL 8846351 pseudo LOC102007318 ubiquitin-conjugating enzyme E2 L3 pseudogene NW_004955412 10793664 10794367 - 102007318 AGCD01012785;XM_005378041;XM_005378042 MODEL 8848861 ncrna LOC102006956 uncharacterized LOC102006956 NW_004955438 989747 1006079 + 102006956 AGCD01034966;AGCD01034967;AGCD01034968;GBDF01002597;XR_001235135;XR_261908;XR_261909 MODEL 8770015 protein-coding Afap1l1 actin filament associated protein 1 like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955415 5079876 5140905 - 102026969 AGCD01015990;GBCE01008759;GBDK01009948;XM_005380616 XP_005380673 MODEL 8972148 protein-coding Aldh2 aldehyde dehydrogenase 2 family member ENCODES a protein that exhibits acetaldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); carboxylesterase activity (ortholog); INVOLVED IN acetaldehyde metabolic process (ortholog); aldehyde catabolic process (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Acute Alcohol Sensitivity (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955482 8352569 8383097 + 102030529 AGCD01057517;GBCE01001171;XM_005403173 XP_005403230 MODEL 8728581 protein-coding Prelid1 PRELI domain containing 1 ENCODES a protein that exhibits phosphatidic acid transfer activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of mitochondrial membrane potential (ortholog); negative regulation of release of cytochrome c from mitochondria (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); melanoma (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955408 29551253 29554778 + 102022363 AGCD01008762;GBDJ01010771;XM_005376421;XM_005376423 XP_005376478;XP_005376480 MODEL 39134336 misc_rna 7SK 7SK RNA 8871504 protein-coding Clasp2 cytoplasmic linker associated protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); dystroglycan binding (ortholog); microtubule binding (ortholog); INVOLVED IN basement membrane organization (ortholog); cell migration (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axonal growth cone (ortholog); basal cortex (ortholog); cell cortex (ortholog) NW_004955421 767648 957160 - 102019605 AGCD01021578;AGCD01021579;AGCD01021580;AGCD01021581;AGCD01021582;AGCD01021583;GBCB01004782;XM_005383646;XM_005383650;XM_005383651;XM_005383653;XM_005383655;XM_013513733;XM_013513734;XM_013513736;XM_013513737;XM_013513738;XM_013513739;XM_013513740;XM_013513741;XM_013513742;XM_013513743;XM_013513744;XM_013513745;XM_013513746 XP_005383703;XP_005383707;XP_005383708;XP_005383710;XP_005383712;XP_013369187;XP_013369188;XP_013369190;XP_013369191;XP_013369192;XP_013369193;XP_013369194;XP_013369195;XP_013369196;XP_013369197;XP_013369198;XP_013369199;XP_013369200 MODEL 8794334 protein-coding Apoa1 apolipoprotein A1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein A-I receptor binding (ortholog); apolipoprotein receptor binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta formation (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; forkhead class A signaling pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Acute Tubulointerstitial Nephritis (ortholog); adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); discoidal high-density lipoprotein particle (ortholog) NW_004955412 18170331 18172298 - 102023342 AGCD01012927;GBDJ01086480;XM_005378193 P0DMS2;XP_005378250 MODEL 8988619 protein-coding Rps6ka6 ribosomal protein S6 kinase A6 INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of embryonic development (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); synapse (ortholog) NW_004955529 3115652 3296505 - 102021480 AGCD01069784;AGCD01069785;GBDJ01193816;XM_005410079;XM_013507539 XP_005410136;XP_013362993 MODEL 9034745 protein-coding Plec plectin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ankyrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actomyosin contractile ring assembly actin filament organization (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 1 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2Q (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basal plasma membrane (ortholog) NW_004955454 2583138 2644308 - 102016445 AGCD01045025;AGCD01045026;GBCE01030252;XM_005395823;XM_005395824;XM_005395825;XM_005395826;XM_005395827;XM_005395828;XM_005395829;XM_005395830;XM_005395832;XM_013520104 XP_005395880;XP_005395881;XP_005395882;XP_005395883;XP_005395884;XP_005395885;XP_005395886;XP_005395887;XP_005395889;XP_013375558 MODEL 8743427 pseudo LOC102004419 acyl-protein thioesterase 1 pseudogene NW_004955535 3723222 3723807 + 102004419 AGCD01070706;XM_005410498 MODEL 8756714 protein-coding Cd226 CD226 molecule ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); positive regulation of Fc receptor mediated stimulatory signaling pathway (ortholog); positive regulation of immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955402 53408861 53560896 - 102004342 AGCD01001364;AGCD01001365;AGCD01001366;AGCD01001367;AGCD01001368;AGCD01001369;AGCD01001370;GBDK01109733;XM_005373050;XM_013511304;XM_013511309;XM_013511315;XM_013511318;XM_013511325;XM_013511326;XM_013511335;XM_013511340 XP_005373107;XP_013366758;XP_013366763;XP_013366769;XP_013366772;XP_013366779;XP_013366780;XP_013366789;XP_013366794 MODEL 39134030 misc_rna 7SK 7SK RNA 8832245 protein-coding Cep57 centrosomal protein 57 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); protein homooligomerization (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 638718 693837 + 102010464 AGCD01012492;AGCD01012493;AGCD01012494;GBCB01111211;XM_013511046;XM_013511047;XM_013511048 XP_013366500;XP_013366501;XP_013366502 MODEL 8737061 protein-coding Setd4 SET domain containing 4 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955407 35215247 35239488 - 102004560 AGCD01007732;AGCD01007733;GBCE01108284;XM_005375712;XM_005375720;XM_013504516;XM_013504518;XM_013504520;XM_013504521;XM_013504526;XM_013504535;XM_013504538 XP_005375769;XP_005375777;XP_013359970;XP_013359972;XP_013359974;XP_013359975;XP_013359980;XP_013359989;XP_013359992 MODEL 8840211 pseudo LOC102018214 retinal dehydrogenase 1-like NW_004955434 130312 183170 - 102018214 AGCD01031996;AGCD01031997;AGCD01031998;AGCD01031999;AGCD01032000 MODEL 8898079 pseudo LOC102011619 60S ribosomal protein L6-like NW_004955405 15379752 15381035 + 102011619 AGCD01004944 MODEL 8897227 pseudo LOC102013970 dnaJ homolog subfamily A member 2 pseudogene NW_004955438 16349528 16350769 + 102013970 AGCD01035405 MODEL 39132010 rrna 5S_rRNA 5S ribosomal RNA 730469561 misc_rna DLG2-AS1_1 DLG2 antisense RNA 1 conserved region 1 8767657 pseudo LOC102005858 40S ribosomal protein S4-like NW_004955575 415119 417705 + 102005858 AGCD01075221 MODEL 8788599 protein-coding Fgf2 fibroblast growth factor 2 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine binding (ortholog); cytokine activity (ortholog); INVOLVED IN angiogenesis involved in coronary vascular morphogenesis (ortholog); behavioral response to ethanol (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN ceric oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Animal Mammary Neoplasms (ortholog); Arteriovenous Fistula (ortholog); FOUND IN extracellular region (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955428 17840554 17894779 - 102017484 AGCD01028052;GBBH01210560;GBCQ01087264;XM_013515320 XP_013370774 MODEL 8911030 protein-coding Ikzf4 IKAROS family zinc finger 4 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH alopecia areata (ortholog); encephalomyelitis (ortholog); high grade glioma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955458 3589865 3627154 + 102028270 AGCD01047325;AGCD01047326;AGCD01047327;AGCD01047328;GBBH01094526;GBDF01304051;XM_013520979;XM_013520980;XM_013520981;XM_013520982;XM_013520983;XM_013520984;XM_013520985 XP_013376433;XP_013376434;XP_013376435;XP_013376436;XP_013376437;XP_013376438;XP_013376439 MODEL 8864367 protein-coding Ankrd23 ankyrin repeat domain 23 ENCODES a protein that exhibits titin binding (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); regulation of sarcomere organization (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); congestive heart failure (ortholog); diastolic heart failure (ortholog); FOUND IN I band (ortholog); intercalated disc (ortholog); myofibril (ortholog) NW_004955470 4195872 4200979 - 102023252 AGCD01052728;GBDI01118906;XM_005400683 XP_005400740 MODEL 8829320 protein-coding Epg5 ectopic P-granules 5 autophagy tethering factor INVOLVED IN anatomical structure homeostasis (ortholog); apoptotic process (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN lysosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955402 31422848 31532189 - 102025742 AGCD01000788;AGCD01000789;AGCD01000790;GBDF01280540;XM_005372862;XM_013510404 XP_005372919;XP_013365858 MODEL 8827805 protein-coding LOC102003007 vomeronasal type-1 receptor 4-like NW_004955465 13056058 13056990 - 102003007 AGCD01050581;XM_005399004 XP_005399061 MODEL 9035097 protein-coding LOC102004030 prolactin-like NW_004955990 1149 6207 - 102004030 AGCD01078817;AGCD01078818;AGCD01078819;XM_005415158 XP_005415215 MODEL 8978684 protein-coding Adam11 ADAM metallopeptidase domain 11 INVOLVED IN behavioral response to acetic acid induced pain (ortholog); behavioral response to formalin induced pain (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN perikaryon (ortholog); presynaptic membrane (ortholog) NW_004955451 17608732 17614469 + 102016442 AGCD01043763;GBCB01131517;GBCE01084702;XM_013519435 XP_013374889 MODEL 39132251 rrna 5S_rRNA 5S ribosomal RNA 8793580 protein-coding Rbm42 RNA binding motif protein 42 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN precatalytic spliceosome (ortholog); spliceosomal complex (ortholog); U4/U6 x U5 tri-snRNP complex (ortholog) NW_004955468 4844780 4854261 + 102024989 AGCD01051922;GBDI01067655;XM_005400070;XM_005400071 XP_005400127;XP_005400128 MODEL 8841428 ncrna LOC102010025 uncharacterized LOC102010025 NW_004955407 17318652 17322814 + 102010025 AGCD01007247;GBDF01021440;XR_259568 MODEL 8885737 protein-coding Slc30a1 solute carrier family 30 member 1 ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium:monoatomic cation antiporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cadmium ion transmembrane transport (ortholog); calcium ion import (ortholog); copper ion transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); visual epilepsy (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955406 5662312 5668331 + 102014742 AGCD01005735;GBDF01051945;XM_013520219 XP_013375673 MODEL 8753937 protein-coding Cdip1 cell death inducing p53 target 1 INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic side of late endosome membrane (ortholog); cytoplasmic side of lysosomal membrane (ortholog) NW_004955442 12895403 12913517 + 102007470 AGCD01037748;GBDK01139151;XM_005391281;XM_005391282;XM_005391283;XM_005391284;XM_005391285;XM_005391286;XM_005391287 XP_005391338;XP_005391339;XP_005391340;XP_005391341;XP_005391342;XP_005391343;XP_005391344 MODEL 39134031 misc_rna 7SK 7SK RNA 10369020 ncrna LOC106150328 uncharacterized LOC106150328 NW_004955472 2417077 2421696 - 106150328 AGCD01053460;XR_001237072 MODEL 39131379 protein-coding SNTB2 syntrophin beta 2 8981138 protein-coding Plek pleckstrin ENCODES a protein that exhibits phosphatase activator activity (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cortical actin cytoskeleton organization (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); ruffle membrane (ortholog) NW_004955424 16494052 16524790 - 102022101 AGCD01024743;AGCD01024744;GBDK01147367;XM_005385668 XP_005385725 MODEL 8758678 protein-coding Atp6v1b1 ATPase H+ transporting V1 subunit B1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); ATP metabolic process (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); cervical cancer (ortholog); Distal Renal Tubular Acidosis 2 with Progressive Nerve Deafness (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955424 14256096 14281572 - 102029761 AGCD01024648;AGCD01024649;GBCE01141930;XM_005385605 XP_005385662 MODEL 8793086 protein-coding LOC102008868 CD70 antigen-like NW_004955495 3023146 3026631 - 102008868 AGCD01061815;GBDK01116023;XM_005405704;XM_005405705;XM_013505038;XM_013505039 XP_005405761;XP_005405762;XP_013360492;XP_013360493 MODEL 8734333 protein-coding Btg3 BTG anti-proliferation factor 3 INVOLVED IN negative regulation of mitotic cell cycle (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH cholestasis (ortholog); renal cell carcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955407 18927211 18939576 - 102012927 AGCD01007289;GBCE01095553;GBDF01047524;XM_013503870 XP_013359324 MODEL 39134153 misc_rna 7SK 7SK RNA 9026957 protein-coding CUNH6orf136 chromosome unknown C6orf136 homolog ASSOCIATED WITH lung squamous cell carcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955583 653994 657385 + 102017723 AGCD01075845;AGCD01075846;GBCB01006587;GBDI01062201;XM_013509801 XP_013365255 MODEL 8707950 ncrna LOC102013619 uncharacterized LOC102013619 NW_004955421 18803353 18811236 - 102013619 AGCD01022056;GBDF01014486;XR_001233862;XR_260797 MODEL 9022544 protein-coding Aldh3a1 aldehyde dehydrogenase 3 family member A1 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); cellular detoxification of aldehyde (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN alkaptonuria pathway; cyclophosphamide pharmacodynamics pathway; cyclophosphamide pharmacokinetics pathway; ASSOCIATED WITH arteriosclerosis (ortholog); autism spectrum disorder (ortholog); cataract (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955467 96140 105738 + 102025778 AGCD01051209;GBBH01172351;XM_005399260;XM_013522026 XP_005399317;XP_013377480 MODEL 39134337 misc_rna 7SK 7SK RNA 8937083 protein-coding Abtb2 ankyrin repeat and BTB domain containing 2 INVOLVED IN cellular response to toxic substance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 11913334 12082421 + 102017992 AGCD01022773;AGCD01022774;AGCD01022775;AGCD01022776;GBCQ01153025;XM_005384147 XP_005384204 MODEL 730469136 misc_rna DLG2-AS1_2 DLG2 antisense RNA 1 conserved region 2 8913244 protein-coding Asl argininosuccinate lyase ENCODES a protein that exhibits argininosuccinate lyase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); ammonia assimilation cycle (ortholog); arginine metabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); argininosuccinic aciduria (ortholog); autistic disorder (ortholog); FOUND IN cell body fiber (ortholog); mitochondrial outer membrane (ortholog); neuronal cell body (ortholog) NW_004955456 8409767 8419915 - 102005227 AGCD01046476;AGCD01046477;AGCD01046478;GBDJ01008461;GBDJ01008463;XM_013520597 XP_013376051 MODEL 8948569 protein-coding Wasf2 WASP family member 2 ENCODES a protein that exhibits protein kinase A binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); ameboidal-type cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell-cell junction (ortholog); early endosome (ortholog) NW_004955452 6658854 6733964 - 102004775 AGCD01044118;AGCD01044119;AGCD01044120;AGCD01044121;AGCD01044122;AGCD01044123;AGCD01044124;GBCE01074273;XM_005394909;XM_013519649 XP_005394966;XP_013375103 MODEL 9014004 pseudo LOC102009626 U6 snRNA-associated Sm-like protein LSm6 pseudogene NW_004955423 13610988 13611230 + 102009626 AGCD01023749 MODEL 9000249 protein-coding Afap1l2 actin filament associated protein 1 like 2 ENCODES a protein that exhibits protein tyrosine kinase activator activity (ortholog); SH2 domain binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN inflammatory response (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955431 19275257 19378507 - 102017045 AGCD01030447;AGCD01030448;GBBH01150926;GBDI01098533;XM_005387827 XP_005387884 MODEL 8987846 protein-coding LOC102022308 olfactory receptor 18-like NW_004955495 593768 600132 - 102022308 AGCD01061641;AGCD01061642;GBDF01256202;XM_013505086 XP_013360540 MODEL 8732119 protein-coding Cd24 CD24 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic nuclear changes (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); multiple sclerosis (ortholog); pancreatic cancer (ortholog); FOUND IN cell surface (ortholog); ciliary membrane (ortholog); external side of plasma membrane (ortholog) NW_004955411 32270881 32275236 - 102008202 AGCD01012298;GBDF01223492;XM_005377835 XP_005377892 MODEL 9033918 pseudo LOC102013218 spindle and kinetochore-associated protein 2-like NW_004955440 2553852 2554722 + 102013218 AGCD01036210 MODEL 9043830 ncrna LOC102012030 uncharacterized LOC102012030 NW_004955442 16080957 16097609 + 102012030 AGCD01037891;GBDF01225468;XR_262160;XR_262161 MODEL 9064300 ncrna LOC102007320 uncharacterized LOC102007320 NW_004955413 65629 71480 + 102007320 AGCD01013436;XR_260039 MODEL 9041710 ncrna LOC102010830 uncharacterized LOC102010830 NW_004955513 2631451 2640898 - 102010830 AGCD01066883;GBDF01209406;XR_264458 MODEL 9008644 ncrna LOC102006962 uncharacterized LOC102006962 NW_004955442 18374768 18409901 + 102006962 AGCD01038005;AGCD01038006;GBCE01069332;XR_262164 MODEL 9027259 pseudo LOC102011620 60S ribosomal protein L27 pseudogene NW_004955452 12777543 12777937 - 102011620 AGCD01044365 MODEL 39133745 misc_rna 7SK 7SK RNA 8763029 protein-coding Plek2 pleckstrin 2 ENCODES a protein that exhibits phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); erythrocyte enucleation (ortholog); positive regulation of cell projection organization (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955466 2818004 2836688 + 102016362 AGCD01050765;AGCD01050766;AGCD01050767;AGCD01050768;GBDF01147329;XM_005399083 XP_005399140 MODEL 8750184 protein-coding LOC102004794 olfactory receptor 8G1-like NW_004955412 25040599 25044790 + 102004794 AGCD01013133;XM_005378413;XM_013511248 XP_005378470;XP_013366702 MODEL 8758011 protein-coding Clasrp CLK4 associating serine/arginine rich protein ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955555 2086356 2109503 + 102003070 AGCD01073129;AGCD01073130;GBBH01119174;XM_005412485;XM_005412486;XM_005412488;XM_013508747 XP_005412542;XP_005412543;XP_005412545;XP_013364201 MODEL 8891255 protein-coding Apoa2 apolipoprotein A2 ENCODES a protein that exhibits apolipoprotein receptor binding (ortholog); cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to lipoprotein particle stimulus (ortholog); cholesterol efflux (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH APOLIPOPROTEIN A-II DEFICIENCY (ortholog); coronary artery disease (ortholog); Diabetic Nephropathies (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); high-density lipoprotein particle (ortholog) NW_004955468 12977956 12979282 - 102007646 AGCD01052194;GBDF01236482;XM_005400270 XP_005400327 MODEL 8879987 protein-coding Ikzf5 IKAROS family zinc finger 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); disease by infectious agent (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955477 1160183 1177597 - 102024795 AGCD01055503;GBDF01002880;XM_005401953;XM_005401954;XM_005401955;XM_013503085;XM_013503086 XP_005402010;XP_005402011;XP_005402012;XP_013358539;XP_013358540 MODEL 8843634 protein-coding Trmt1 tRNA methyltransferase 1 ENCODES a protein that exhibits tRNA (guanine(26)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN tRNA N2-guanine methylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 68 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955415 32126630 32136770 - 102029616 AGCD01016710;AGCD01016711;GBDF01119256;XM_013512177 XP_013367631 MODEL 8742745 ncrna LOC102004424 uncharacterized LOC102004424 NW_004955438 15400685 15404077 + 102004424 AGCD01035366;GBDF01187415;XR_261938 MODEL 9022823 protein-coding Rps6kb1 ribosomal protein S6 kinase B1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cell migration (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Atrophy (ortholog); autosomal dominant polycystic kidney disease (ortholog); Burns (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955451 3181085 3225610 - 102012490 AGCD01043045;AGCD01043046;AGCD01043047;AGCD01043048;GBDF01045917;XM_005393978;XM_005393979;XM_013519164 XP_005394035;XP_005394036;XP_013374618 MODEL 39132252 rrna 5S_rRNA 5S ribosomal RNA 8773875 protein-coding Catsperd cation channel sperm associated auxiliary subunit delta INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955495 3663878 3711595 - 102006365 AGCD01061874;AGCD01061875;AGCD01061876;AGCD01061877;AGCD01061878;AGCD01061879;GBDF01045800;XM_005406146 XP_005406203 MODEL 8742967 protein-coding Adam12 ADAM metallopeptidase domain 12 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955477 3917637 4263529 - 102011866 AGCD01055577;AGCD01055578;AGCD01055579;AGCD01055580;AGCD01055581;GBCE01119464;GBCQ01016280;XM_005402080 XP_005402137 MODEL 8705218 pseudo LOC102018215 60S ribosomal protein L7 pseudogene NW_004955521 4288386 4289394 - 102018215 AGCD01068259 MODEL 8963693 protein-coding LOC102022310 uncharacterized LOC102022310 NW_004955426 23903866 23906254 + 102022310 AGCD01026659;GBCE01080087;XM_005386239;XR_001234325 XP_005386296 MODEL 8845785 pseudo LOC102013971 nuclear receptor-binding factor 2 pseudogene NW_004955547 1394680 1395701 - 102013971 AGCD01072221 MODEL 39132011 rrna 5S_rRNA 5S ribosomal RNA 8795766 protein-coding Rbm43 RNA binding motif protein 43 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955440 16836877 16843414 - 102018986 AGCD01036533;GBBH01065800;XM_013517442 XP_013372896 MODEL 8809440 protein-coding Prelid2 PRELI domain containing 2 ASSOCIATED WITH cholangiocarcinoma (ortholog); Hereditary Neoplastic Syndromes (ortholog); melanoma (ortholog) NW_004955415 8259707 8342179 + 102020658 AGCD01016070;AGCD01016071;AGCD01016072;AGCD01016073;GBDK01286329;XM_005380687 XP_005380744 MODEL 9020705 ncrna LOC102008492 uncharacterized LOC102008492 NW_004955405 32452517 32475010 - 102008492 AGCD01005333;GBDJ01347641;XR_259420 MODEL 39133746 misc_rna 7SK 7SK RNA 8988024 protein-coding CUNH6orf141 chromosome unknown C6orf141 homolog INVOLVED IN blastocyst hatching (ortholog) NW_004955410 33414621 33420002 - 102029157 AGCD01011370;GBCE01002650;XM_013510688;XM_013510689;XM_013510690;XM_013510691;XM_013510692;XM_013510693 XP_013366142;XP_013366143;XP_013366144;XP_013366145;XP_013366146;XP_013366147 MODEL 8967512 protein-coding Btg4 BTG anti-proliferation factor 4 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN maternal-to-zygotic transition of gene expression (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 8 (ortholog) NW_004955412 13137273 13250261 - 102013397 AGCD01012829;GBBH01185406;XM_005378059;XM_013511008;XM_013511009;XM_013511010;XM_013511011;XM_013511012;XM_013511014;XM_013511015;XM_013511016 XP_005378116;XP_013366462;XP_013366463;XP_013366464;XP_013366465;XP_013366466;XP_013366468;XP_013366469;XP_013366470 MODEL 8806577 protein-coding Ankrd24 ankyrin repeat domain 24 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog); stereocilium (ortholog) NW_004955495 4621059 4636235 - 102012553 AGCD01061937;AGCD01061938;GBDF01115379;XM_013505209;XM_013505210;XM_013505211;XM_013505212 XP_013360663;XP_013360664;XP_013360665;XP_013360666 MODEL 8708100 protein-coding Aldh3a2 aldehyde dehydrogenase 3 family member A2 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); farnesal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); central nervous system development (ortholog); epidermis development (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); epilepsy (ortholog); exanthem (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955467 141592 162376 - 102024986 AGCD01051211;GBCB01005261;XM_005399257;XM_005399258 XP_005399314;XP_005399315 MODEL 8753405 pseudo LOC102008123 protein S100-A10 pseudogene NW_004955495 7868008 7869132 - 102008123 AGCD01062169 MODEL 9066868 protein-coding LOC102004031 uncharacterized LOC102004031 NW_004955452 2163418 2166480 - 102004031 AGCD01043879;GBDF01008884;XM_005394728;XM_005394730;XM_013519464;XM_013519465;XM_013519466;XM_013519467;XM_013519468 XP_005394785;XP_005394787;XP_013374918;XP_013374919;XP_013374920;XP_013374921;XP_013374922 MODEL 9049585 protein-coding Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog) NW_004955514 3698644 3699227 - 102008971 AGCD01067105;GBCE01116712;GBDF01001526;XM_013506813 XP_013362267 MODEL 8938708 protein-coding Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase ENCODES a protein that exhibits alcohol binding (ortholog); carbohydrate binding (ortholog); CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity (ortholog); INVOLVED IN CDP-diacylglycerol metabolic process (ortholog); phosphatidylinositol biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955493 7087491 7091306 + 102006786 AGCD01061154;GBDF01195209;XM_005405232 XP_005405289 MODEL 8929206 protein-coding LOC102005859 RE1-silencing transcription factor NW_004955447 14183770 14196122 - 102005859 AGCD01040989;GBBH01193455;GBCE01108856;XM_013518551 XP_013374005 MODEL 9055423 protein-coding Sntg1 syntrophin gamma 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); ruffle membrane (ortholog) NW_004955454 9698609 10439874 + 102026291 AGCD01045349;AGCD01045350;AGCD01045351;AGCD01045352;AGCD01045353;AGCD01045354;AGCD01045355;AGCD01045356;AGCD01045357;AGCD01045358;AGCD01045359;AGCD01045360;AGCD01045361;AGCD01045362;AGCD01045363;AGCD01045364;AGCD01045365;AGCD01045366;GBDF01142064;XM_005396048;XM_005396049;XM_005396050 XP_005396105;XP_005396106;XP_005396107 MODEL 8770430 protein-coding Cep57l1 centrosomal protein 57 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955411 34140830 34213086 + 102014122 AGCD01012382;AGCD01012383;AGCD01012384;AGCD01012385;AGCD01012386;AGCD01012387;AGCD01012388;AGCD01012389;GBDF01051594;XM_005377851;XM_005377852;XM_005377853;XM_005377854;XM_005377855 XP_005377908;XP_005377909;XP_005377910;XP_005377911;XP_005377912 MODEL 8914011 protein-coding LOC102007321 uncharacterized LOC102007321 NW_004955413 2702114 2703313 - 102007321 AGCD01013558;GBCB01123825;XM_005378745;XM_005378746 XP_005378802;XP_005378803 MODEL 8784216 ncrna LOC102008869 uncharacterized LOC102008869 NW_004955423 21824204 21851556 + 102008869 AGCD01023949;GBCQ01142430;XR_260986 MODEL 39134154 misc_rna 7SK 7SK RNA 8904016 protein-coding LOC102013622 zinc finger protein 782-like NW_004955422 23753650 23770962 + 102013622 AGCD01023205;AGCD01023206;GBCB01120769;XM_013513988;XM_013513989 XP_013369442;XP_013369443 MODEL 8884575 pseudo LOC102003008 DPY30 domain-containing protein 2 pseudogene NW_004955413 2319331 2319955 + 102003008 AGCD01013544 MODEL 8957169 protein-coding LOC102008496 glutathione S-transferase theta-1 NW_004955455 8324748 8336051 - 102008496 AGCD01045886;AGCD01045887;GBDI01296088;XM_005396409 XP_005396466 MODEL 8965720 protein-coding Wasf3 WASP family member 3 INVOLVED IN lamellipodium assembly (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); oligodendrocyte development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); postsynapse (ortholog) NW_004955497 6100633 6190639 + 102028556 AGCD01062622;AGCD01062623;AGCD01062624;AGCD01062625;AGCD01062626;GBDF01158437;XM_005406347;XM_005406348;XM_005406349;XM_005406350 XP_005406404;XP_005406405;XP_005406406;XP_005406407 MODEL 8812664 protein-coding LOC102009630 U8 snoRNA-decapping enzyme-like NW_004955501 7101160 7103076 - 102009630 AGCD01064204;GBDF01154480;XM_005406843 XP_005406900 MODEL 8831905 protein-coding Setd5 SET domain containing 5 ENCODES a protein that exhibits histone H3 methyltransferase activity (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); INVOLVED IN cognition (ortholog); negative regulation of transcription by RNA polymerase III (ortholog); regulation of chromatin organization (ortholog); ASSOCIATED WITH anemia (ortholog); ankyloglossia (ortholog); anxiety disorder (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); euchromatin (ortholog) NW_004955561 968814 1091687 + 102029235 AGCD01073827;AGCD01073828;AGCD01073829;AGCD01073830;AGCD01073831;GBDJ01090978;XM_005413006;XM_005413007;XM_005413008;XM_005413009;XM_005413010;XM_005413012;XM_005413013;XM_005413014;XM_005413015;XM_013509075;XM_013509076;XM_013509077;XM_013509078 XP_005413063;XP_005413064;XP_005413065;XP_005413066;XP_005413067;XP_005413069;XP_005413070;XP_005413071;XP_005413072;XP_013364529;XP_013364530;XP_013364531;XP_013364532 MODEL 9022240 protein-coding Afdn afadin, adherens junction formation factor ENCODES a protein that exhibits actin filament binding (ortholog); cell adhesion molecule binding (ortholog); LIM domain binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); bicellular tight junction assembly (ortholog); brain morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) NW_004955439 14324910 14428846 - 102019642 AGCD01035973;GBCB01061375;XM_013517333;XM_013517334;XM_013517335;XM_013517336;XM_013517337;XM_013517338;XM_013517339;XM_013517340;XM_013517341;XM_013517342;XM_013517343;XM_013517344;XM_013517345;XM_013517346;XM_013517347;XM_013517348;XM_013517349 XP_013372787;XP_013372788;XP_013372789;XP_013372790;XP_013372791;XP_013372792;XP_013372793;XP_013372794;XP_013372795;XP_013372796;XP_013372797;XP_013372798;XP_013372799;XP_013372800;XP_013372801;XP_013372802;XP_013372803 MODEL 39134032 misc_rna 7SK 7SK RNA 8865927 protein-coding Rps6kb2 ribosomal protein S6 kinase B2 ENCODES a protein that exhibits ATP binding (ortholog); peptide binding (ortholog); protein kinase activity (ortholog); INVOLVED IN negative regulation of insulin receptor signaling pathway (ortholog); positive regulation of translational initiation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955422 18043785 18050406 - 102018937 AGCD01022936;GBCQ01065372;XM_005384331 XP_005384388 MODEL 8930553 ncrna LOC102010832 uncharacterized LOC102010832 NW_004955437 2142308 2145021 + 102010832 AGCD01034260;GBDF01276932;XR_261830 MODEL 8905108 protein-coding LOC102013220 olfactory receptor 4N5 NW_004955550 102932 103858 - 102013220 AGCD01072481;XM_005412027 XP_005412084 MODEL 8874398 protein-coding LOC102006963 sialic acid-binding Ig-like lectin 14 NW_004955558 1289644 1293742 - 102006963 AGCD01073431;GBDK01013795;XM_005412746 XP_005412803 MODEL 39134338 misc_rna 7SK 7SK RNA 8800620 pseudo LOC102011623 60S ribosomal protein L21 pseudogene NW_004955453 11145197 11145736 + 102011623 AGCD01044801 MODEL 8927970 protein-coding Prelid3a PRELI domain containing 3A ENCODES a protein that exhibits phosphatidic acid transfer activity (ortholog); INVOLVED IN phospholipid transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); thymoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955402 1016977 1027063 - 102011158 AGCD01000042;AGCD01000043;AGCD01000044;GBCE01013503;XM_005372561;XM_005372562;XM_013513802;XR_259007;XR_259008;XR_259009 XP_005372618;XP_005372619;XP_013369256 MODEL 8707822 protein-coding Asmt acetylserotonin O-methyltransferase ENCODES a protein that exhibits acetylserotonin O-methyltransferase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN melatonin biosynthetic process (ortholog); negative regulation of male gonad development (ortholog); PARTICIPATES IN methionine cycle/metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955499 1131637 1151861 + 102009198 AGCD01063323;AGCD01063324;AGCD01063325;XM_005406516 XP_005406573 MODEL 8734097 protein-coding Epgn epithelial mitogen ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955474 564329 573014 + 102006240 AGCD01054223;XM_005401311;XM_013502765;XM_013502766 XP_005401368;XP_013358219;XP_013358220 MODEL 8880585 pseudo LOC102010026 transmembrane protein 50A pseudogene NW_004955455 8395596 8396361 - 102010026 AGCD01045888 MODEL 8986029 protein-coding Slc30a10 solute carrier family 30 member 10 ENCODES a protein that exhibits calcium:manganese antiporter activity (ortholog); manganese ion transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); epidermal growth factor receptor signaling pathway (ortholog); intracellular copper ion homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholestasis (ortholog); dystonia (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); Golgi apparatus (ortholog) NW_004955520 3631192 3641595 + 102004311 AGCD01068107;AGCD01068108;XM_005409285 XP_005409342 MODEL 8980539 ncrna LOC102004039 uncharacterized LOC102004039 NW_004955407 34849285 34853966 + 102004039 AGCD01007727;GBDF01120859;XR_001231203 MODEL 8962445 protein-coding Ankrd27 ankyrin repeat domain 27 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); SNARE binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); endosome to melanosome transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); early endosome (ortholog) NW_004955468 5314779 5364925 + 102003111 AGCD01051963;AGCD01051964;GBCB01041034;XM_013522443;XM_013522444;XM_013522445;XM_013522446;XM_013522447 XP_013377897;XP_013377898;XP_013377899;XP_013377900;XP_013377901 MODEL 8786808 protein-coding Abtb3 ankyrin repeat and BTB domain containing 3 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN exploration behavior (ortholog); protein stabilization (ortholog); synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955405 41123136 41299803 + 102026939 AGCD01005541;AGCD01005542;AGCD01005543;AGCD01005544;AGCD01005545;AGCD01005546;GBBH01021992;XM_005374637;XM_005374638;XM_005374639 XP_005374694;XP_005374695;XP_005374696 MODEL 8968114 protein-coding Aldh3b1 aldehyde dehydrogenase 3 family member B1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN aldehyde catabolic process (ortholog); cellular response to oxidative stress (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955422 17786495 17801014 - 102008116 AGCD01022932;GBDI01017322;XM_005384290;XM_005384291 XP_005384347;XP_005384348 MODEL 8705394 protein-coding Il10 interleukin 10 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-10 receptor binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); cellular response to antibiotic (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Actinic Cheilitis (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN extracellular region (ortholog); interleukin-10 receptor complex (ortholog) NW_004955406 42307789 42312255 - 102022355 AGCD01006700;GBDJ01151912;XM_005375404 XP_005375461 MODEL 8853422 protein-coding Fgf20 fibroblast growth factor 20 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor-receptor interaction (ortholog); INVOLVED IN cell differentiation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); inner ear receptor cell differentiation (ortholog); ASSOCIATED WITH Renal Hypodysplasia/Aplasia 2 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955463 528651 536927 + 102010780 AGCD01049488;XM_005398339 XP_005398396 MODEL 8949623 protein-coding Cd244 CD244 molecule ENCODES a protein that exhibits MHC class I protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN myeloid dendritic cell activation (ortholog); natural killer cell activation (ortholog); natural killer cell activation involved in immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); membrane raft (ortholog) NW_004955468 12532937 12559859 - 102021229 AGCD01052157;AGCD01052158;GBDK01279525;XM_005400218;XM_005400219;XM_013522491;XM_013522492;XR_001236927 XP_005400275;XP_005400276;XP_013377945;XP_013377946 MODEL 8946723 protein-coding Atp6v1b2 ATPase H+ transporting V1 subunit B2 INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autosomal dominant congenital deafness with onychodystrophy (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 43860811 43886398 + 102024869 AGCD01002789;GBBH01090243;XM_005373627 XP_005373684 MODEL 8774071 protein-coding Cdk1 cyclin dependent kinase 1 ENCODES a protein that exhibits chromatin binding (ortholog); cyclin binding (ortholog); cyclin-dependent protein kinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to hydrogen peroxide (ortholog); chromosome condensation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); cyclin A2-CDK1 complex (ortholog); cyclin B1-CDK1 complex (ortholog) NW_004955425 14210681 14226474 + 102016492 AGCD01025555;GBDF01082645;XM_013514913 XP_013370367 MODEL 8755021 pseudo LOC102022311 uncharacterized LOC102022311 NW_004955427 19170551 19172121 + 102022311 AGCD01027359 MODEL 8857878 protein-coding LOC102018217 ubiquitin-conjugating enzyme E2 D2-like NW_004955525 1483494 1484306 + 102018217 AGCD01069039;XM_005409723;XM_005409724;XM_005409725 XP_005409780;XP_005409781;XP_005409782 MODEL 8761541 protein-coding Adam15 ADAM metallopeptidase domain 15 ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); integrin binding (ortholog); metallopeptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cardiac epithelial to mesenchymal transition (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH Brain Hypoxia (ortholog); COVID-19 (ortholog); osteoarthritis (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog) NW_004955545 1545532 1555826 + 102018984 AGCD01071859;GBCE01135021;XM_005411543;XM_005411548;XM_005411549;XM_005411553;XM_005411555;XM_013508296;XM_013508297;XM_013508298;XR_001232186;XR_001232187;XR_001232188;XR_264868 XP_005411600;XP_005411605;XP_005411606;XP_005411610;XP_005411612;XP_013363750;XP_013363751;XP_013363752 MODEL 8920463 protein-coding LOC102013978 kallikrein-4-like NW_004955559 91484 103442 + 102013978 AGCD01073544;XM_013508940 XP_013364394 MODEL 39131811 rrna 5S_rRNA 5S ribosomal RNA 9066394 protein-coding Dlg3 discs large MAGUK scaffold protein 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN establishment of planar polarity (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); neurotransmitter receptor transport to postsynaptic membrane (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955475 9992888 10056197 + 102024998 AGCD01055080;AGCD01055081;AGCD01055082;GBDI01210941;XM_005401627;XM_005401628;XM_005401629;XM_005401630;XM_005401631;XM_005401632;XM_005401633 XP_005401684;XP_005401685;XP_005401686;XP_005401687;XP_005401688;XP_005401689;XP_005401690 MODEL 8856628 protein-coding Rbm44 RNA binding motif protein 44 ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); intercellular bridge (ortholog) NW_004955542 2573648 2620240 - 102030570 AGCD01071526;AGCD01071527;GBDF01048408;XM_005411204;XM_005411205;XM_013508022 XP_005411261;XP_005411262;XP_013363476 MODEL 8699552 pseudo LOC102004795 zinc finger CCCH domain-containing protein 14-like NW_004955466 12129671 12131134 - 102004795 AGCD01051113 MODEL 39134155 misc_rna 7SK 7SK RNA 8804558 protein-coding Apoa4 apolipoprotein A4 ENCODES a protein that exhibits antioxidant activity (ortholog); cholesterol transfer activity (ortholog); copper ion binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH anemia (ortholog); atherosclerosis (ortholog); autosomal dominant tubulointerstitial kidney disease 6 (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular region (ortholog) NW_004955412 18158095 18160636 - 102022179 AGCD01012927;GBCQ01000938;XM_005378188 XP_005378245 MODEL 9010276 pseudo LOC102008128 transcription initiation factor TFIID subunit 9-like NW_004955427 1717479 1718907 + 102008128 AGCD01026879 MODEL 8711111 protein-coding CUNH6orf201 chromosome unknown C6orf201 homolog NW_004955465 9303368 9339691 - 102011518 AGCD01050489;AGCD01050490;GBDF01006952;XM_005398888 XP_005398945 MODEL 9018318 protein-coding Trmt10a tRNA methyltransferase 10A ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN magnesium ion homeostasis (ortholog); tRNA methylation (ortholog); tRNA N1-guanine methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955496 8021747 8037562 + 102023493 AGCD01062387;GBDI01279046;XM_005406269;XM_005406270 XP_005406326;XP_005406327 MODEL 10311755 ncrna LOC106150329 uncharacterized LOC106150329 NW_004955472 12248108 12272311 + 106150329 AGCD01053789;XR_001237073 MODEL 39132253 rrna 5S_rRNA 5S ribosomal RNA 8807236 protein-coding Catspere catsper channel auxiliary subunit epsilon ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN sperm end piece (ortholog); sperm midpiece (ortholog); sperm principal piece (ortholog) NW_004955406 7716831 7861390 + 102005994 AGCD01005774;AGCD01005775;AGCD01005776;AGCD01005777;AGCD01005778;AGCD01081638;GBDF01052108;XM_005374775;XM_013520364;XM_013520365;XM_013520368;XM_013520372;XM_013520373 XP_005374832;XP_013375818;XP_013375819;XP_013375822;XP_013375826;XP_013375827 MODEL 8993830 protein-coding Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); developmental pigmentation (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 11 (ortholog); FOUND IN BLOC-1 complex (ortholog); microvesicle (ortholog); transport vesicle (ortholog) NW_004955465 5910095 5943996 + 102025889 AGCD01050435;AGCD01050436;GBCQ01069346;XM_005398846;XM_005398848 XP_005398903;XP_005398905 MODEL 39134033 misc_rna 7SK 7SK RNA 8723944 pseudo LOC102005865 transcription factor BTF3 homolog 4 pseudogene NW_004955588 220604 221041 + 102005865 AGCD01076095 MODEL 8914093 pseudo LOC102010833 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955532 3917497 3917975 - 102010833 AGCD01070305 MODEL 8750984 pseudo LOC102007328 sal-like protein 4 NW_004955470 12748580 12750141 - 102007328 AGCD01052938 MODEL 8748836 ncrna LOC102008872 uncharacterized LOC102008872 NW_004955424 19963501 19969899 + 102008872 AGCD01024841;GBDI01147421;XR_001234129;XR_001234130;XR_001234131;XR_261086;XR_261087 MODEL 39133749 misc_rna 7SK 7SK RNA 9002418 pseudo LOC102013626 tyrosine-protein phosphatase non-receptor type 2 pseudogene NW_004955497 1815456 1816689 + 102013626 AGCD01062473 MODEL 8776857 ncrna LOC102003012 uncharacterized LOC102003012 NW_004955470 10615968 10634986 + 102003012 AGCD01052872;GBDF01190714;XR_263493 MODEL 9050425 ncrna LOC102009632 uncharacterized LOC102009632 NW_004955427 7305557 7312900 - 102009632 AGCD01027048;GBDF01114554;XR_261237 MODEL 9019091 protein-coding Epha1 EPH receptor A1 ENCODES a protein that exhibits ephrin receptor activity (ortholog); fibronectin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); negative regulation of cell migration (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN plasma membrane (ortholog) NW_004955494 256008 268777 + 102024246 AGCD01061372;GBBH01102984;GBDI01325851;XM_005405360;XM_013504977 XP_005405417;XP_013360431 MODEL 8875611 ncrna LOC102012033 uncharacterized LOC102012033 NW_004955444 1600025 1605604 + 102012033 AGCD01038732;GBDF01041654;XR_001235529 MODEL 8837505 protein-coding Setd6 SET domain containing 6, protein lysine methyltransferase ENCODES a protein that exhibits NF-kappaB binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN regulation of inflammatory response (ortholog); stem cell differentiation (ortholog); stem cell population maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 15934091 15937738 + 102012677 AGCD01031777;GBBH01050346;GBCQ01063968;XM_005388507 XP_005388564 MODEL 8780899 protein-coding Aff1 ALF transcription elongation factor 1 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA-templated transcription elongation (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955474 2748438 2899094 - 102017448 AGCD01054303;AGCD01054304;AGCD01054305;AGCD01054306;AGCD01054307;AGCD01054308;GBBH01077473;XM_005401342;XM_013502745;XM_013502746 XP_005401399;XP_013358199;XP_013358200 MODEL 8988444 protein-coding Aldh4a1 aldehyde dehydrogenase 4 family member A1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); L-glutamate gamma-semialdehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN L-proline catabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955527 338593 369528 + 102016842 AGCD01069382;AGCD01069383;GBDF01128157;XM_005409797 XP_005409854 MODEL 8786768 protein-coding Btk Bruton tyrosine kinase ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN B cell affinity maturation (ortholog); B cell receptor signaling pathway (ortholog); cell maturation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Adenoviridae Infections (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 1 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955503 7483819 7515085 - 102026026 AGCD01064794;GBBH01034514;XM_005406951;XM_005406952 XP_005407008;XP_005407009 MODEL 8943694 ncrna LOC102013232 uncharacterized LOC102013232 NW_004955449 2499555 2513694 - 102013232 AGCD01041828;GBDF01307257;XR_262485 MODEL 8929422 protein-coding Rps6kc1 ribosomal protein S6 kinase C1 ENCODES a protein that exhibits protein kinase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955406 4382931 4542926 - 102014207 AGCD01005687;AGCD01005688;AGCD01005689;AGCD01005690;GBDJ01420240;XM_005374724;XM_005374726;XM_005374727;XM_013520007;XM_013520009 XP_005374781;XP_005374783;XP_005374784;XP_013375461;XP_013375463 MODEL 39134034 misc_rna 7SK 7SK RNA 8767931 protein-coding Plekha1 pleckstrin homology domain containing A1 ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); B cell receptor signaling pathway (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955477 659640 730394 + 102020112 AGCD01055492;AGCD01055493;AGCD01055494;GBDF01226547;XM_005401937;XM_005401939;XM_005401940;XM_005401941;XM_005401942;XM_005401943;XM_005401945;XM_013503083;XM_013503084 XP_005401994;XP_005401996;XP_005401997;XP_005401998;XP_005401999;XP_005402000;XP_005402002;XP_013358537;XP_013358538 MODEL 9017104 protein-coding LOC102006965 UDP-glucuronosyltransferase 2A3-like NW_004955447 3496754 3533598 + 102006965 AGCD01040619;AGCD01040620;AGCD01040621;AGCD01040622;AGCD01040623;AGCD01040624;XM_005392817;XM_013518564 XP_005392874;XP_013374018 MODEL 39134339 misc_rna 7SK 7SK RNA 8735754 pseudo LOC102011624 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955406 19815337 19816321 - 102011624 AGCD01006092 MODEL 39131812 rrna 5S_rRNA 5S ribosomal RNA 8814179 protein-coding LOC102005867 protein S100-A8 ASSOCIATED WITH Acute Otitis Media NW_004955592 72594 73659 + 102005867 AGCD01076300;GBBH01004217;XM_005414602;XM_013509975 XP_005414659;XP_013365429 MODEL 9060518 protein-coding Dlg4 discs large MAGUK scaffold protein 4 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); beta-1 adrenergic receptor binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to potassium ion (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell junction (ortholog); cell periphery (ortholog) NW_004955467 9691733 9715872 + 102028518 AGCD01051521;GBDF01116423;XM_005399548;XM_005399550;XM_005399551;XM_005399553;XM_005399554;XM_005399555;XM_005399556;XM_013522090;XM_013522091;XM_013522092;XM_013522094 XP_005399605;XP_005399607;XP_005399608;XP_005399610;XP_005399611;XP_005399612;XP_005399613;XP_013377544;XP_013377545;XP_013377546;XP_013377548 MODEL 8891187 ncrna LOC102004796 uncharacterized LOC102004796 NW_004955467 6856123 6857620 - 102004796 AGCD01051425;GBDI01226874;XR_263346 MODEL 9027552 protein-coding Asmtl acetylserotonin O-methyltransferase like ENCODES a protein that exhibits dTTP diphosphatase activity (ortholog); UTP diphosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955499 1033926 1047018 - 102024358 AGCD01063306;AGCD01063307;AGCD01063308;GBCE01031982;GBDI01216735;XM_013505602 XP_013361056 MODEL 9027736 ncrna LOC102010035 uncharacterized LOC102010035 NW_004955460 30819 34048 + 102010035 AGCD01048329;GBDF01187342;XR_263021 MODEL 39134156 misc_rna 7SK 7SK RNA 8852732 protein-coding Slc30a2 solute carrier family 30 member 2 ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); zinc export across plasma membrane (ortholog); zinc ion import into lysosome (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); Neonatal Zinc Deficiency due to Low Breast Milk Zinc (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); endosome membrane (ortholog) NW_004955452 5507614 5515669 - 102012051 AGCD01044037;GBDI01355605;XM_005394839 XP_005394896 MODEL 9056069 protein-coding Clba1 clathrin binding box of aftiphilin containing 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955538 3325052 3340534 + 102030237 AGCD01071159;AGCD01071160;GBCE01153411;XM_005410851;XM_005410852;XM_013507884;XM_013507885;XM_013507887 XP_005410908;XP_005410909;XP_013363338;XP_013363339;XP_013363341 MODEL 8999798 protein-coding LOC102022318 olfactory receptor 4A16-like NW_004955511 116700 117623 - 102022318 AGCD01066320;XM_005408177 XP_005408234 MODEL 8911809 pseudo LOC102004041 cofilin-2 pseudogene NW_004955408 16489538 16489996 - 102004041 AGCD01008440 MODEL 8870193 protein-coding Il10ra interleukin 10 receptor subunit alpha ENCODES a protein that exhibits interleukin-10 binding (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to virus (ortholog); hepatic stellate cell activation (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH cerebral degeneration (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN apical plasma membrane (ortholog); C-fiber (ortholog); cytoplasm (ortholog) NW_004955412 19182536 19197083 + 102004584 AGCD01012950;GBDK01061604;XM_005378226 XP_005378283 MODEL 39132254 rrna 5S_rRNA 5S ribosomal RNA 8708546 protein-coding Catsperg cation channel sperm associated auxiliary subunit gamma ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955468 1056197 1099804 - 102016464 AGCD01051749;AGCD01051750;AGCD01051751;AGCD01051752;AGCD01051753;AGCD01051754;AGCD01051755;AGCD01051756;GBDF01008471;GBDI01315833;XM_013522464 XP_013377918 MODEL 8854344 protein-coding Fgf21 fibroblast growth factor 21 INVOLVED IN cellular response to glucagon stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Cardiomegaly (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955559 1818400 1821423 - 102004527 AGCD01073671;GBDF01061434;XM_013508993;XM_013508994 XP_013364447;XP_013364448 MODEL 8915383 protein-coding Sntg2 syntrophin gamma 2 ENCODES a protein that exhibits neuroligin family protein binding (ortholog); PDZ domain binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955487 533719 639056 - 102007345 AGCD01059221;AGCD01059222;AGCD01059223;AGCD01059224;GBDK01266841;XM_005404340;XM_013504329;XM_013504330;XM_013504331;XM_013504332 XP_005404397;XP_013359783;XP_013359784;XP_013359785;XP_013359786 MODEL 8909240 protein-coding Cd247 CD247 molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); Fc-gamma receptor signaling pathway (ortholog); positive regulation of protein localization to cell surface (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); cytoplasm (ortholog); Fc-gamma receptor III complex (ortholog) NW_004955462 9466706 9539897 + 102025984 AGCD01049339;GBCE01129875;XM_005398233;XM_013521423 XP_005398290;XP_013376877 MODEL 8771587 protein-coding Atp6v1c1 ATPase H+ transporting V1 subunit C1 ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical part of cell (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955417 27340916 27376541 + 102020804 AGCD01018548;AGCD01018549;AGCD01018550;AGCD01018551;GBCE01052289;GBCE01052294;XM_013512778;XM_013512779 XP_013368232;XP_013368233 MODEL 8787858 protein-coding Cdk10 cyclin dependent kinase 10 ENCODES a protein that exhibits cyclin-dependent protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); positive regulation of MAPK cascade (ortholog); regulation of actin cytoskeleton organization (ortholog); ASSOCIATED WITH Al Kaissi syndrome (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN ciliary basal body (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); nucleus (ortholog) NW_004955541 3235441 3242377 + 102013543 AGCD01071440;GBBH01051607;XM_005411050;XM_005411051;XM_005411052;XM_005411054;XM_005411055;XM_005411056;XM_005411057;XM_013507947;XM_013507948;XM_013507949 XP_005411107;XP_005411108;XP_005411109;XP_005411111;XP_005411112;XP_005411113;XP_005411114;XP_013363401;XP_013363402;XP_013363403 MODEL 8754913 pseudo LOC102013979 amyloid beta A4 protein pseudogene NW_004955444 13139589 13140893 + 102013979 AGCD01039093 MODEL 730469283 snorna ACA64 Small nucleolar RNA ACA64 8704306 pseudo LOC102007330 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955414 4403610 4404427 - 102007330 AGCD01014865 MODEL 9042708 protein-coding Adam17 ADAM metallopeptidase domain 17 ENCODES a protein that exhibits cytokine binding (ortholog); endopeptidase activity (ortholog); integrin binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); B cell differentiation (ortholog); cell adhesion (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); atopic dermatitis (ortholog); FOUND IN actin cytoskeleton (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955487 5180241 5218298 - 102024344 AGCD01059322;GBDK01129567;XM_005404397;XM_013504340;XM_013504341 XP_005404454;XP_013359794;XP_013359795 MODEL 8723386 protein-coding CUNH7orf25 chromosome unknown C7orf25 homolog FOUND IN nucleoplasm (ortholog) NW_004955460 895201 897703 + 102013148 AGCD01048350;GBDF01090066;XM_005397716;XM_005397717;XM_005397720;XM_013521293 XP_005397773;XP_005397774;XP_005397777;XP_013376747 MODEL 8986472 protein-coding Washc2c WASH complex subunit 2C ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); negative regulation of barbed-end actin filament capping (ortholog); protein localization to endosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endosome (ortholog) NW_004955546 2718758 2764277 - 102018987 AGCD01072099;AGCD01072100;GBDI01070765;XM_013508426;XM_013508427;XM_013508428 XP_013363880;XP_013363881;XP_013363882 MODEL 39133750 misc_rna 7SK 7SK RNA 9059246 pseudo LOC102008130 40S ribosomal protein S15a pseudogene NW_004955428 3708701 3774517 + 102008130 AGCD01027660;AGCD01027661 MODEL 8843524 protein-coding Ankrd28 ankyrin repeat domain 28 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN positive regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); protein serine/threonine phosphatase complex (ortholog) NW_004955430 8014631 8197434 - 102025277 AGCD01029378;AGCD01029379;AGCD01029380;AGCD01029381;AGCD01029382;AGCD01029383;GBDI01293224;XM_005387446;XM_005387448;XM_013515633;XM_013515634;XM_013515635;XM_013515636;XM_013515637;XM_013515638 XP_005387503;XP_005387505;XP_013371087;XP_013371088;XP_013371089;XP_013371090;XP_013371091;XP_013371092 MODEL 8711623 protein-coding Apoa5 apolipoprotein A5 ENCODES a protein that exhibits enzyme binding (ortholog); heparin binding (ortholog); lipase activator activity (ortholog); INVOLVED IN acylglycerol homeostasis (ortholog); animal organ regeneration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH cerebral infarction (ortholog); coronary artery disease (ortholog); dementia (ortholog); FOUND IN chylomicron (ortholog); early endosome (ortholog); extracellular region (ortholog) NW_004955412 18128861 18131752 - 102021108 AGCD01012926;XM_005378185;XM_005378186;XM_013511206 XP_005378242;XP_005378243;XP_013366660 MODEL 8724552 pseudo LOC102004427 KATNB1-like protein 1 NW_004955553 1440942 1443862 - 102004427 AGCD01072882 MODEL 8901826 ncrna LOC102010037 uncharacterized LOC102010037 NW_004955460 11260440 11300237 + 102010037 AGCD01048631;GBDF01076385;XR_001236536;XR_263060 MODEL 9049919 protein-coding Prelid3b PRELI domain containing 3B ENCODES a protein that exhibits phosphatidylserine transfer activity (ortholog); INVOLVED IN intermembrane phospholipid transfer (ortholog); mitochondrial membrane organization (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955445 552634 563324 + 102017610 AGCD01039319;GBDF01054211;XM_005392207;XM_005392208;XM_005392209 XP_005392264;XP_005392265;XP_005392266 MODEL 8989832 ncrna LOC102004798 uncharacterized LOC102004798 NW_004955467 11715338 11717008 - 102004798 AGCD01051616;GBDF01192925;XR_263361 MODEL 8724600 protein-coding LOC102008498 interferon-induced GTP-binding protein Mx2-like NW_004955407 35275551 35296838 - 102008498 AGCD01007736;GBBH01139527;XM_005375727;XM_013504510 XP_005375784;XP_013359964 MODEL 8977656 protein-coding Epha10 EPH receptor A10 ENCODES a protein that exhibits ATP binding (ortholog); transmembrane-ephrin receptor activity (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 88 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955452 15510054 15547769 - 102014005 AGCD01044486;AGCD01044487;GBDF01009991;XM_013519462 XP_013374916 MODEL 39132255 rrna 5S_rRNA 5S ribosomal RNA 8708735 protein-coding Cep63 centrosomal protein 63 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); meiotic telomere clustering (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnodactyly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955501 4032281 4095990 - 102022721 AGCD01064106;AGCD01064107;AGCD01064108;AGCD01064109;AGCD01064110;AGCD01064111;GBCE01065764;XM_005406794;XM_005406795;XM_005406798;XM_013505782;XM_013505783;XM_013505785;XM_013505786;XM_013505787 XP_005406851;XP_005406852;XP_005406855;XP_013361236;XP_013361237;XP_013361239;XP_013361240;XP_013361241 MODEL 8887043 ncrna LOC102008873 uncharacterized LOC102008873 NW_004955427 6400197 6403763 + 102008873 AGCD01027028;GBDF01126299;XR_261236 MODEL 9045075 protein-coding Aldh5a1 aldehyde dehydrogenase 5 family member A1 ENCODES a protein that exhibits carboxylic acid binding (ortholog); identical protein binding (ortholog); NAD binding (ortholog); INVOLVED IN central nervous system development (ortholog); GABA catabolic process (ortholog); GABA shunt (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955483 2467425 2494416 - 102007230 AGCD01057678;GBCE01045506;GBCQ01039671;XM_005403428 XP_005403485 MODEL 8908039 protein-coding Plekha2 pleckstrin homology domain containing A2 ENCODES a protein that exhibits fibronectin binding (ortholog); laminin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of cell-matrix adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955463 14462875 14525174 + 102027500 AGCD01049910;AGCD01049911;GBCE01011414;XM_005398458;XM_005398460;XM_005398461;XM_013521516;XM_013521517 XP_005398515;XP_005398517;XP_005398518;XP_013376970;XP_013376971 MODEL 39134340 misc_rna 7SK 7SK RNA 9005615 pseudo LOC102013627 60S ribosomal protein L17 pseudogene NW_004955424 15289709 15291262 - 102013627 AGCD01024701 MODEL 39134157 misc_rna 7SK 7SK RNA 9048400 protein-coding Trmt10b tRNA methyltransferase 10B ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955419 28693509 28720006 - 102004072 AGCD01020473;GBDI01353475;XM_005382868;XM_005382869;XM_005382870;XM_005382871;XM_005382872;XM_013513181;XM_013513182 XP_005382925;XP_005382926;XP_005382927;XP_005382928;XP_005382929;XP_013368635;XP_013368636 MODEL 8987448 protein-coding LOC102003013 olfactory receptor 2S2-like NW_004955472 324392 328281 - 102003013 AGCD01053328;XM_013522926 XP_013378380 MODEL 8714015 protein-coding LOC102009633 chromosome unknown open reading frame, human C17orf62 INVOLVED IN calcium ion transport (ortholog); gene expression (ortholog); innate immune response (ortholog); ASSOCIATED WITH autosomal recessive chronic granulomatous disease 5 (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955506 697091 702900 + 102009633 AGCD01065234;GBCQ01009071;XM_005407199;XM_005407201;XM_005407202;XM_013506085;XM_013506086 XP_005407256;XP_005407258;XP_005407259;XP_013361539;XP_013361540 MODEL 8730198 pseudo LOC102012039 creatine kinase U-type, mitochondrial pseudogene NW_004955447 18787639 18792112 - 102012039 AGCD01041191 MODEL 8874933 protein-coding Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ENCODES a protein that exhibits actin filament binding (ortholog); AP-3 adaptor complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); adenosine metabolic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN actin filament (ortholog); axon terminus (ortholog); BLOC-1 complex (ortholog) NW_004955409 7902125 7913966 - 102019250 AGCD01009369;GBBH01116617;XM_005376726;XM_005376727 XP_005376783;XP_005376784 MODEL 9053578 protein-coding LOC102018220 butyrophilin subfamily 1 member A1-like NW_004955437 999109 1050071 - 102018220 AGCD01034182;AGCD01034183;AGCD01034184;AGCD01034185;AGCD01034186;AGCD01034187;GBCQ01003449;XM_005389445 XP_005389502 MODEL 8902042 protein-coding Slc30a3 solute carrier family 30 member 3 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of transport (ortholog); zinc ion import into lysosome (ortholog); zinc ion import into synaptic vesicle (ortholog); ASSOCIATED WITH Febrile Seizures (ortholog); high grade glioma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN clathrin-sculpted vesicle (ortholog); cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955469 9235159 9254291 - 102025675 AGCD01052497;AGCD01052498;GBDF01003772;XM_005400475;XM_005400476;XM_005400477;XM_013522596;XM_013522597;XM_013522598 XP_005400532;XP_005400533;XP_005400534;XP_013378050;XP_013378051;XP_013378052 MODEL 8980605 pseudo LOC102004429 40S ribosomal protein S2 pseudogene NW_004955561 1164116 1164961 - 102004429 AGCD01073840 MODEL 8930387 protein-coding Btla B and T lymphocyte associated ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); immune response-regulating cell surface receptor signaling pathway (ortholog); negative regulation of alpha-beta T cell proliferation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955427 12804467 12837178 - 102026657 AGCD01027226;AGCD01027227;GBDI01324577;XM_005386387 XP_005386444 MODEL 8705149 protein-coding Rps6kl1 ribosomal protein S6 kinase like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955523 645444 659004 + 102015659 AGCD01068474;GBDF01251184;XM_005409384;XM_005409385 XP_005409441;XP_005409442 MODEL 9017209 protein-coding LOC102013233 late cornified envelope protein 1A NW_004955592 591385 593007 - 102013233 AGCD01076319;GBCE01061985;XM_005414620 XP_005414677 MODEL 8895433 protein-coding LOC102010836 protein S100-A6-like NW_004955545 93760 170651 - 102010836 AGCD01071765;AGCD01071766;AGCD01071767;AGCD01071768;AGCD01071769;AGCD01071770;AGCD01071771;AGCD01071772;AGCD01071773;AGCD01071774;GBDJ01329857;XM_005411405;XR_001232180 XP_005411462 MODEL 8999334 protein-coding Epha2 EPH receptor A2 ENCODES a protein that exhibits ephrin receptor activity (ortholog); growth factor binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN axial mesoderm formation (ortholog); blood vessel development (ortholog); blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cataract 6 multiple types (ortholog); cervical cancer (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); focal adhesion (ortholog) NW_004955527 2120447 2151932 + 102004197 AGCD01069422;AGCD01069423;GBDI01327302;XM_005409845 XP_005409902 MODEL 8864864 pseudo LOC102011627 glyceraldehyde-3-phosphate dehydrogenase pseudogene NW_004955456 12484506 12486673 - 102011627 AGCD01046567 MODEL 39131813 rrna 5S_rRNA 5S ribosomal RNA 8964661 pseudo LOC102005870 RING finger and transmembrane domain-containing protein 1 pseudogene NW_004955602 483146 483899 - 102005870 AGCD01076788 MODEL 8726005 protein-coding Asnsd1 asparagine synthetase domain containing 1 INVOLVED IN adipose tissue development (ortholog); muscle organ development (ortholog); skeletal muscle organ development (ortholog); ASSOCIATED WITH myopathy (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog) NW_004955403 9176425 9184310 - 102007394 AGCD01001901;GBDF01123988;GBDI01173372;XM_005373320;XM_013512372 XP_005373377;XP_013367826 MODEL 8840654 pseudo LOC102008132 40S ribosomal protein S15 pseudogene NW_004955429 10102174 10102807 + 102008132 AGCD01028666 MODEL 9066624 protein-coding Ankrd29 ankyrin repeat domain 29 ASSOCIATED WITH esophageal cancer (ortholog) NW_004955402 11751417 11775499 - 102019874 AGCD01000306;AGCD01000307;GBBH01101627;GBDK01000009;XM_013504248 XP_013359702 MODEL 9001066 protein-coding Aff2 ALF transcription elongation factor 2 ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of gene expression (ortholog); nuclear speck organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955498 1012323 1497031 + 102020584 AGCD01062737;AGCD01062738;AGCD01062739;AGCD01062740;AGCD01062741;AGCD01062742;AGCD01062743;AGCD01062744;GBBH01113542;XM_005406396 XP_005406453 MODEL 8946544 protein-coding Apob apolipoprotein B ENCODES a protein that exhibits cholesterol transfer activity (ortholog); heparin binding (ortholog); lipase binding (ortholog); INVOLVED IN artery morphogenesis (ortholog); cellular response to lipoprotein particle stimulus (ortholog); cellular response to prostaglandin stimulus (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; forkhead class A signaling pathway; lipoprotein metabolic pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); arteriosclerosis (ortholog); Arthralgia (ortholog); FOUND IN chylomicron (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955469 3437422 3478408 - 102018588 AGCD01052300;GBDI01245911;JN414052;XM_005400358;XM_005400359 AEP18088;XP_005400415;XP_005400416 MODEL 39134035 misc_rna 7SK 7SK RNA 8913532 protein-coding Rbm46 RNA binding motif protein 46 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cell cycle switching, mitotic to meiotic cell cycle (ortholog); female meiotic nuclear division (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955471 12096400 12167536 - 102016372 AGCD01053272;AGCD01053273;AGCD01053274;GBDF01049866;XM_013522862 XP_013378316 MODEL 8820675 protein-coding Sntn sentan, cilia apical structure protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cilium (ortholog) NW_004955517 2210700 2233760 - 102023184 AGCD01067619;AGCD01067620;AGCD01067621;AGCD01067622;GBBH01031963;XM_013506948 XP_013362402 MODEL 8746455 protein-coding Rps7 ribosomal protein S7 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); neural tube closure (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955487 3793168 3798007 - 102017669 AGCD01059294;GBCC01001033;XM_005404373 XP_005404430 MODEL 8761450 protein-coding LOC102013981 uncharacterized LOC102013981 NW_004955567 1595757 1628166 + 102013981 AGCD01074484;AGCD01074485;GBDK01330281;XM_013509232 XP_013364686 MODEL 39132267 rrna 5S_rRNA 5S ribosomal RNA 8892458 protein-coding Aldh6a1 aldehyde dehydrogenase 6 family member A1 ENCODES a protein that exhibits methylmalonate-semialdehyde dehydrogenase (acylating, NAD+) activity (ortholog); thiolester hydrolase activity (ortholog); INVOLVED IN beta-alanine catabolic process (ortholog); brown fat cell differentiation (ortholog); L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); autism spectrum disorder (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955523 1343545 1369080 + 102021166 AGCD01068514;GBDK01130133;XM_005409401;XM_013507128 XP_005409458;XP_013362582 MODEL 8949314 ncrna LOC102007332 uncharacterized LOC102007332 NW_004955474 9962827 10021859 - 102007332 AGCD01054580;AGCD01054581;AGCD01054582;AGCD01054583;AGCD01054584;GBDF01078385;XR_001230747 MODEL 39133751 misc_rna 7SK 7SK RNA 8817470 protein-coding Clca1 chloride channel accessory 1 INVOLVED IN cellular response to hypoxia (ortholog); ASSOCIATED WITH asbestosis (ortholog); asthma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN membrane (ortholog); microvillus (ortholog); secretory granule (ortholog) NW_004955423 7684741 7714438 - 102021459 AGCD01023610;GBDI01162443;XM_005385128 XP_005385185 MODEL 8818950 protein-coding CUNH8orf33 chromosome unknown C8orf33 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955454 3515898 3518046 + 102021306 AGCD01045086;GBDF01249616;XM_005395940;XM_005395941 XP_005395997;XP_005395998 MODEL 8983630 protein-coding LOC102004045 protocadherin Fat 2 NW_004955410 4266352 4360690 + 102004045 AGCD01010661;AGCD01010662;AGCD01010663;AGCD01010664;AGCD01010665;AGCD01010666;GBBH01166136;XM_005377194;XM_005377195;XM_005377196 XP_005377251;XP_005377252;XP_005377253 MODEL 8972043 protein-coding Plekha3 pleckstrin homology domain containing A3 ENCODES a protein that exhibits identical protein binding (ortholog); molecular carrier activity (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955403 18347309 18366503 - 102025747 AGCD01002097;GBCE01098308;GBDK01139966;XM_013512613 XP_013368067 MODEL 8743051 protein-coding Setd7 SET domain containing 7, histone lysine methyltransferase ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); DNA damage response (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); cognitive disorder (ortholog); extrahepatic cholestasis (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955428 4131431 4178250 + 102017588 AGCD01027667;AGCD01027668;GBCE01001559;XM_005386687 XP_005386744 MODEL 8968137 pseudo LOC102008500 serine/threonine-protein phosphatase 4 regulatory subunit 2-like NW_004955407 23016972 23161621 + 102008500 AGCD01007411;AGCD01007412;AGCD01007413;AGCD01007414;AGCD01007415 MODEL 8838738 protein-coding Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit ENCODES a protein that exhibits identical protein binding (ortholog); tRNA (adenine(9)-N1)-methyltransferase activity (ortholog); tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial RNA 5'-end processing (ortholog); mitochondrial tRNA 3'-end processing (ortholog); mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 30 (ortholog); Developmental Disabilities (ortholog); Fatigue (ortholog); FOUND IN catalytic complex (ortholog); endoribonuclease complex (ortholog); mitochondrial matrix (ortholog) NW_004955427 3133225 3137070 + 102028659 AGCD01026918;GBCB01042255;XM_005386322;XM_005386323;XM_013515081 XP_005386379;XP_005386380;XP_013370535 MODEL 8897851 protein-coding LOC102004805 cystatin-12-like NW_004955415 30453323 30456586 + 102004805 AGCD01016664;GBDF01005832;XM_005380969 XP_005381026 MODEL 8836150 protein-coding LOC102010041 coatomer subunit gamma-2 NW_004955410 36982233 37086997 + 102010041 AGCD01011442;AGCD01011443;AGCD01011444;AGCD01011445;GBDF01004497;XM_005377554;XM_013510640 XP_005377611;XP_013366094 MODEL 8936546 protein-coding Fgf22 fibroblast growth factor 22 INVOLVED IN regulation of synapse maturation (ortholog); trans-synaptic signaling (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); extrinsic component of postsynaptic density membrane (ortholog) NW_004955495 7099616 7102749 - 102022404 AGCD01062118;XM_005406031 XP_005406088 MODEL 10131609 ncrna LOC106150330 uncharacterized LOC106150330 NW_004955472 12098041 12114855 - 106150330 AGCD01053782;AGCD01053783;AGCD01053784;GBDK01422278;XR_001237074 MODEL 8832403 protein-coding Cdk11b cyclin dependent kinase 11B ENCODES a protein that exhibits ATP binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN blastocyst development (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); negative regulation of apoptotic signaling pathway (ortholog); ASSOCIATED WITH Brachymorphism-Onychodysplasia-Dysphalangism Syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); cyclin L-CDK11 complex (ortholog) NW_004955486 9251242 9270218 + 102015320 AGCD01059168;AGCD01059169;AGCD01059170;AGCD01059171;GBDJ01006318;XM_005404200 XP_005404257 MODEL 8764438 protein-coding Cd248 CD248 molecule ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN anatomical structure regression (ortholog); cell migration (ortholog); lymph node development (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 19006618 19009532 + 102013307 AGCD01022970;GBCE01145879;XM_013514158 XP_013369612 MODEL 8807017 protein-coding Slc30a4 solute carrier family 30 member 4 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN lactation (ortholog); otolith development (ortholog); response to toxic substance (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); late endosome (ortholog) NW_004955409 7963454 7991600 + 102024771 AGCD01009371;GBCE01097726;GBDF01000969;XM_005377147 XP_005377204 MODEL 9025652 pseudo LOC102006967 transmembrane and TPR repeat-containing protein 3 pseudogene NW_004955582 159962 162499 - 102006967 AGCD01075747 MODEL 8974060 protein-coding LOC102013240 janus kinase and microtubule-interacting protein 2 NW_004956233 948 7905 - 102013240 AGCD01079289;XM_005415182 XP_005415239 MODEL 8726779 protein-coding Acaa2 acetyl-CoA acyltransferase 2 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); acetyl-CoA C-acyltransferase activity (ortholog); acetyl-CoA hydrolase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to hypoxia (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); basal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955402 34857317 34885169 - 102014845 AGCD01000872;AGCD01000873;GBDJ01085210;XM_005372912;XM_013510632 XP_005372969;XP_013366086 MODEL 8963385 protein-coding Btn1a1 butyrophilin subfamily 1 member A1 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog) NW_004955483 392749 409947 - 102012199 AGCD01057609;GBCB01025102;XM_005403280;XM_005403281;XM_005403282;XM_005403283;XM_005403284;XM_013503766 XP_005403337;XP_005403338;XP_005403339;XP_005403340;XP_005403341;XP_013359220 MODEL 8888703 protein-coding Cep68 centrosomal protein 68 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) NW_004955424 19424088 19439126 - 102005059 AGCD01024825;GBCB01077392;GBDF01162527;XM_013514674 XP_013370128 MODEL 8973382 protein-coding Adam18 ADAM metallopeptidase domain 18 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); lymphoma (ortholog) NW_004955536 3014457 3109257 - 102018976 AGCD01070806;AGCD01070807;AGCD01070808;AGCD01070809;GBDF01051796;XM_005410540;XM_013507734;XM_013507735;XM_013507736;XM_013507737;XM_013507738;XM_013507739;XM_013507740;XM_013507741;XM_013507742 XP_005410597;XP_013363188;XP_013363189;XP_013363190;XP_013363191;XP_013363192;XP_013363193;XP_013363194;XP_013363195;XP_013363196 MODEL 9038288 ncrna LOC102010838 uncharacterized LOC102010838 NW_004955440 18922189 18925290 - 102010838 AGCD01036623;GBDF01266858;XR_262046 MODEL 8734111 protein-coding Rps8 ribosomal protein S8 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955464 13443580 13445391 - 102006993 AGCD01050279;AGCD01050280;GBCB01003744;GBDI01000130;XM_013521630 XP_013377084 MODEL 8842458 pseudo LOC102011628 26S proteasome non-ATPase regulatory subunit 14-like NW_004955457 7388758 7389844 + 102011628 AGCD01046877 MODEL 39131814 rrna 5S_rRNA 5S ribosomal RNA 9030080 protein-coding Il10rb interleukin 10 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN interleukin-10-mediated signaling pathway (ortholog); positive regulation of cellular respiration (ortholog); positive regulation of receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); COVID-19 (ortholog); graft-versus-host disease (ortholog); FOUND IN interleukin-10 receptor complex (ortholog); signaling receptor complex (ortholog) NW_004955407 32641097 32659360 + 102019141 AGCD01007680;GBBH01051844;GBBH01051845;XM_005375678 XP_005375735 MODEL 39134158 misc_rna 7SK 7SK RNA 8974663 ncrna LOC102007340 uncharacterized LOC102007340 NW_004955482 6352713 6353828 - 102007340 AGCD01057386;GBDF01082671;XR_263836 MODEL 8784301 protein-coding Prelp proline and arginine rich end leucine rich repeat protein ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN cellular senescence (ortholog); ASSOCIATED WITH bone structure disease (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955406 39429845 39442577 + 102012727 AGCD01006628;AGCD01006629;GBBH01031868;XM_005375267;XM_013522616 XP_005375324;XP_013378070 MODEL 8713342 ncrna LOC102012041 uncharacterized LOC102012041 NW_004955402 6962055 6984367 - 102012041 AGCD01000163;GBDF01177670;XR_001235410;XR_001235416;XR_001235420;XR_001235423;XR_259036 MODEL 9045863 pseudo LOC102008136 ras-related protein Rab-8B pseudogene NW_004955431 13166481 13167496 - 102008136 AGCD01030286 MODEL 8964247 pseudo LOC102018222 ribulose-phosphate 3-epimerase-like NW_004955537 2568245 2569307 - 102018222 AGCD01070931 MODEL 8743996 ncrna LOC102004433 uncharacterized LOC102004433 NW_004955446 7583181 7605662 - 102004433 AGCD01040125;AGCD01040126;GBCQ01106414;XR_001235672;XR_001235673;XR_001235674;XR_001235675;XR_001235676;XR_001235677;XR_001235678;XR_001235679;XR_001235680;XR_262387 MODEL 8788609 protein-coding Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); cytosine deaminase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cytidine to uridine editing (ortholog); defense response to virus (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH colon cancer (ortholog); Experimental Liver Cirrhosis (ortholog); familial hyperlipidemia (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955413 6471933 6480475 - 102017972 AGCD01013743;GBDF01301259;XM_005379611 XP_005379668 MODEL 8841427 pseudo LOC102008875 phosducin-like protein 3 pseudogene NW_004955427 21601337 21602111 + 102008875 AGCD01027451 MODEL 8830067 protein-coding Dlg5 discs large MAGUK scaffold protein 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN apical protein localization (ortholog); epithelial to mesenchymal transition (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); cell junction (ortholog) NW_004955437 14510488 14628768 + 102021484 AGCD01034676;AGCD01034677;AGCD01034678;GBBH01115032;GBDF01192616;XM_005389900;XM_005389902 XP_005389957;XP_005389959 MODEL 8868196 pseudo LOC102022321 heterogeneous nuclear ribonucleoprotein C pseudogene NW_004955521 3730039 3730772 - 102022321 AGCD01068241 MODEL 8824573 protein-coding LOC102006973 translational activator GCN1-like NW_004956042 4662 8692 - 102006973 AGCD01078929;XM_005415165 XP_005415222 MODEL 8928041 pseudo LOC102013629 elongation factor 1-alpha 1-like NW_004955503 7106308 7167094 + 102013629 AGCD01064779;AGCD01064780;AGCD01064781;AGCD01064782;AGCD01064783 MODEL 8803453 protein-coding LOC102005873 PRAME family member 12-like NW_004955615 256153 258758 + 102005873 AGCD01077252;XM_005414985 XP_005415042 MODEL 8920217 ncrna LOC102003014 uncharacterized LOC102003014 NW_004955472 1903577 1923457 + 102003014 AGCD01053416;AGCD01053417;AGCD01053418;AGCD01053419;GBDF01013402;XR_001237086 MODEL 8856478 protein-coding Aspa aspartoacylase ENCODES a protein that exhibits aspartoacylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetate metabolic process (ortholog); aspartate metabolic process (ortholog); central nervous system myelination (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Canavan disease (ortholog); Experimental Diabetes Mellitus (ortholog); Tremor (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); myelin sheath (ortholog) NW_004955467 13277014 13332658 - 102023889 AGCD01051670;AGCD01051671;GBCQ01041040;XM_005399729;XM_013522251;XM_013522252;XM_013522253;XM_013522254;XM_013522255 XP_005399786;XP_013377705;XP_013377706;XP_013377707;XP_013377708;XP_013377709 MODEL 39131418 protein-coding WASHC3 WASH complex subunit 3 9066203 protein-coding LOC102009638 olfactory receptor 5M11-like NW_004955511 1723110 1724093 + 102009638 AGCD01066377;XM_005407974 XP_005408031 MODEL 8871021 protein-coding Ankrd30a ankyrin repeat domain 30A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955546 798445 890288 + 102029226 AGCD01072025;AGCD01072026;AGCD01072027;AGCD01072028;AGCD01072029;AGCD01072030;AGCD01072031;AGCD01072032;GBDJ01277982;XM_013508375;XM_013508376;XM_013508377;XM_013508378;XM_013508379;XM_013508380;XM_013508381 XP_013363829;XP_013363830;XP_013363831;XP_013363832;XP_013363833;XP_013363834;XP_013363835 MODEL 8905569 pseudo LOC102004807 putative protein FAM10A5 NW_004955415 13842980 13844236 - 102004807 AGCD01016270 MODEL 39134036 misc_rna 7SK 7SK RNA 8851772 protein-coding Bltp1 bridge-like lipid transfer protein family member 1 INVOLVED IN endocytic recycling (ortholog); endosomal transport (ortholog); lipid transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alkuraya-Kucinskas syndrome (ortholog); anemia (ortholog) NW_004955428 18224987 18424425 - 102016180 AGCD01028058;AGCD01028059;AGCD01028060;AGCD01028061;AGCD01028062;AGCD01028063;GBDJ01004871;XM_005386777;XM_013515288;XM_013515289;XM_013515290;XM_013515291;XM_013515292;XM_013515293;XM_013515294;XM_013515295 XP_005386834;XP_013370742;XP_013370743;XP_013370744;XP_013370745;XP_013370746;XP_013370747;XP_013370748;XP_013370749 MODEL 9008503 protein-coding Atp6v1c2 ATPase H+ transporting V1 subunit C2 ENCODES a protein that exhibits identical protein binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955487 5711235 5735081 + 102003031 AGCD01059343;AGCD01059344;AGCD01059345;GBCQ01073152;XM_005404415;XM_005404416;XM_013504367;XM_013504368;XM_013504369;XM_013504370;XM_013504371;XM_013504372 XP_005404472;XP_005404473;XP_013359821;XP_013359822;XP_013359823;XP_013359824;XP_013359825;XP_013359826 MODEL 8923016 protein-coding Cdk12 cyclin dependent kinase 12 ENCODES a protein that exhibits cyclin binding (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cyclin K-CDK12 complex (ortholog); nuclear cyclin-dependent protein kinase holoenzyme complex (ortholog); nuclear speck (ortholog) NW_004955451 14244392 14345885 + 102019460 AGCD01043538;AGCD01043539;AGCD01043540;AGCD01043541;AGCD01043542;AGCD01043543;AGCD01043544;AGCD01043545;AGCD01043546;AGCD01043547;GBBH01061497;GBDI01323519;XM_013519192 XP_013374646 MODEL 39134341 misc_rna 7SK 7SK RNA 8746986 pseudo LOC102013982 vomeronasal type-1 receptor 4-like NW_004955569 807810 808559 + 102013982 AGCD01074620 MODEL 39132268 rrna 5S_rRNA 5S ribosomal RNA 8790610 protein-coding Dlgap1 DLG associated protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN aggresome assembly (ortholog); modulation of chemical synaptic transmission (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density, intracellular component (ortholog) NW_004955402 6809126 7105356 + 102012591 AGCD01000162;AGCD01000163;AGCD01000164;AGCD01000165;GBBH01181793;XM_005372643;XM_005372644;XM_005372645;XM_005372646;XM_005372647;XM_013517746;XM_013517781;XM_013517823 XP_005372700;XP_005372701;XP_005372702;XP_005372703;XP_005372704;XP_013373200;XP_013373235;XP_013373277 MODEL 8856572 protein-coding Aff3 ALF transcription elongation factor 3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN embryonic hindlimb morphogenesis (ortholog); regulation of DNA-templated transcription (ortholog); response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); central sleep apnea (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955470 5800152 6183761 - 102028181 AGCD01052760;AGCD01052761;AGCD01052762;AGCD01052763;AGCD01052764;AGCD01052765;GBCE01171131;XM_005400832 XP_005400889 MODEL 8911479 protein-coding Aldh7a1 aldehyde dehydrogenase 7 family member A1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); betaine-aldehyde dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid catabolic process (ortholog); endosome to lysosome transport (ortholog); energy homeostasis (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; choline metabolic pathway; glutaric aciduria type I pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); benign neonatal seizures (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrial matrix (ortholog) NW_004955521 4365075 4396105 - 102018524 AGCD01068261;GBDF01084687;XM_005409326 XP_005409383 MODEL 9008565 protein-coding Plekha4 pleckstrin homology domain containing A4 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955559 1756695 1775558 + 102003593 AGCD01073666;GBCQ01039883;XM_005412930 XP_005412987 MODEL 8966850 protein-coding Epha3 EPH receptor A3 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN cell migration (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH atrial fibrillation (ortholog); colon adenocarcinoma (ortholog); disease of cellular proliferation (ortholog); FOUND IN early endosome (ortholog); extracellular region (ortholog); GABA-ergic synapse (ortholog) NW_004955407 4135671 4500900 - 102019666 AGCD01006872;AGCD01006873;AGCD01006874;AGCD01006875;AGCD01006876;AGCD01006877;AGCD01006878;AGCD01006879;AGCD01006880;AGCD01006881;GBBH01045871;XM_005375517;XM_005375518 XP_005375574;XP_005375575 MODEL 8988137 pseudo LOC102004058 olfactory receptor 51I1-like NW_004955414 21304994 21305922 + 102004058 AGCD01015412 MODEL 10222175 protein-coding Catsperh catsper channel auxiliary subunit eta FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955422 20108510 20110493 + 106148485 AGCD01023066;GBDF01222835;XM_013514195;XM_013514196 XP_013369649;XP_013369650 MODEL 8903690 protein-coding Snu13 small nuclear ribonucleoprotein 13 ENCODES a protein that exhibits ATPase binding (ortholog); box C/D sno(s)RNA binding (ortholog); snoRNA binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); mRNA splicing, via spliceosome (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); dense fibrillar component (ortholog); nucleolus (ortholog) NW_004955413 27160985 27172648 - 102023018 AGCD01014496;AGCD01014497;GBDF01002032;XM_005379365 XP_005379422 MODEL 8978307 ncrna LOC102008501 uncharacterized LOC102008501 NW_004955457 7028448 7038296 + 102008501 AGCD01046864;GBCB01099923;XR_262927 MODEL 9035347 protein-coding Setd9 SET domain containing 9 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955446 10994388 11004034 - 102013459 AGCD01040194;GBDF01050852;GBDF01050854;XM_013518469 XP_013373923 MODEL 9013244 pseudo LOC102008140 28S ribosomal protein S36, mitochondrial pseudogene NW_004955434 3982156 3983215 - 102008140 AGCD01032152 MODEL 8771651 protein-coding Fgf23 fibroblast growth factor 23 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to interleukin-6 (ortholog); cellular response to leptin stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal dominant hypophosphatemic rickets (ortholog); Bone Fractures (ortholog); calcinosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955413 2182459 2192279 - 102029842 AGCD01013543;GBCE01069564;XM_005378729 XP_005378786 MODEL 8975398 protein-coding Slc30a5 solute carrier family 30 member 5 ENCODES a protein that exhibits cadmium ion transmembrane transporter activity (ortholog); zinc efflux transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); GPI anchor biosynthetic process (ortholog); intracellular zinc ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bradycardia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955446 158843 196275 - 102009893 AGCD01039930;AGCD01039931;GBBH01087914;XM_005392594;XM_013518421 XP_005392651;XP_013373875 MODEL 8781469 protein-coding Cd27 CD27 molecule ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN adaptive immune memory response involving T cells and B cells (ortholog); CD27 signaling pathway (ortholog); extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); Cachexia (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955413 4102740 4107739 + 102014761 AGCD01013600;GBDK01366680;XM_005378767;XM_005378768 XP_005378824;XP_005378825 MODEL 8842486 pseudo LOC102013244 tetraspanin-7-like NW_004955452 10222211 10222773 - 102013244 AGCD01044271 MODEL 39133752 misc_rna 7SK 7SK RNA 8845758 protein-coding LOC102011631 solute carrier family 40 member 1-like NW_004955410 25194888 25237636 - 102011631 AGCD01011145;GBDK01125549;XM_013510582 XP_013366036 MODEL 8728616 protein-coding Il11 interleukin 11 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-11 receptor binding (ortholog); INVOLVED IN interleukin-11-mediated signaling pathway (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of hormone secretion (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); colon adenocarcinoma (ortholog); cystitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955567 868272 883563 + 102024172 AGCD01074441;AGCD01074442;AGCD01074443;GBDF01023421;XM_005413324;XM_005413325;XM_013509308;XM_013509309 XP_005413381;XP_005413382;XP_013364762;XP_013364763 MODEL 39134159 misc_rna 7SK 7SK RNA 8830555 protein-coding LOC102007346 uncharacterized LOC102007346 NW_004955491 8656799 8664951 + 102007346 AGCD01060620;GBDK01151127;XM_013504571 XP_013360025 MODEL 8891427 protein-coding Rps9 ribosomal protein S9 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955604 73593 76414 - 102011384 AGCD01076861;GBDJ01021129;XM_005414849 XP_005414906 MODEL 8875471 protein-coding LOC102010044 ribosomal large subunit pseudouridine synthase B-like NW_004955412 5260904 5261677 - 102010044 AGCD01012623;GBDF01280111;GBDF01280112;XM_013511125 XP_013366579 MODEL 10297477 ncrna LOC106150331 uncharacterized LOC106150331 NW_004955472 2263418 2269139 + 106150331 AGCD01053450;GBBH01162786;XR_001237076;XR_001237077 MODEL 8923496 protein-coding LOC102018228 olfactory receptor 11G2-like NW_004955550 899553 900582 + 102018228 AGCD01072529;XM_005412040 XP_005412097 MODEL 8750346 protein-coding LOC102009639 BBSome-interacting protein 1-like NW_004955430 6423139 6423588 - 102009639 AGCD01029292;GBCC01033208;XM_005387391;XM_013515616 XP_005387448;XP_013371070 MODEL 8861321 protein-coding LOC102004443 uncharacterized LOC102004443 NW_004955450 6923696 6931369 + 102004443 AGCD01042529;GBDK01381035;XM_005393876 XP_005393933 MODEL 8702063 protein-coding Bltp2 bridge-like lipid transfer protein family member 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955481 4509840 4544706 + 102029080 AGCD01056943;GBCE01116508;GBCQ01065420;XM_005402743 XP_005402800 MODEL 8723184 ncrna LOC102004808 uncharacterized LOC102004808 NW_004955476 10982505 10987287 - 102004808 AGCD01055434;GBDF01013264;XR_263645;XR_263646 MODEL 8764487 protein-coding Fgf3 fibroblast growth factor 3 INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of cardiac muscle tissue development (ortholog); organ induction (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Breast Neoplasms (ortholog); cleft lip (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955422 16333363 16339853 + 102016488 AGCD01022895;XM_005384959 XP_005385016 MODEL 8769906 ncrna LOC102022325 uncharacterized LOC102022325 NW_004955534 3881965 3883137 - 102022325 AGCD01070605;GBDI01106511;XR_264762 MODEL 8982233 protein-coding Cep70 centrosomal protein 70 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN acrosome assembly (ortholog); apoptotic process (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955501 478920 533104 + 102004731 AGCD01064030;AGCD01064031;AGCD01064032;GBDI01227221;XM_005406727;XM_005406728;XM_005406729;XM_013505738;XM_013505739;XM_013505740;XM_013505742;XM_013505743;XM_013505744;XM_013505745 XP_005406784;XP_005406785;XP_005406786;XP_013361192;XP_013361193;XP_013361194;XP_013361196;XP_013361197;XP_013361198;XP_013361199 MODEL 9055743 protein-coding Adam19 ADAM metallopeptidase domain 19 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); heart development (ortholog); membrane protein ectodomain proteolysis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleus (ortholog) NW_004955408 11651298 11746391 - 102016024 AGCD01008314;AGCD01008315;AGCD01008316;AGCD01008317;GBDJ01135894;XM_005376236;XM_005376238;XM_013508800 XP_005376293;XP_005376295;XP_013364254 MODEL 8986535 protein-coding Clca2 chloride channel accessory 2 ENCODES a protein that exhibits chloride channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN chloride transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); Lung Neoplasms (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog) NW_004955423 7729032 7760340 - 102021778 AGCD01023611;GBCC01011126;XM_005385129 XP_005385186 MODEL 39131815 rrna 5S_rRNA 5S ribosomal RNA 8779950 protein-coding LOC102010839 cytochrome P450 2S1 ENCODES a protein that exhibits 12-hydroxyheptadecatrienoic acid synthase activity (ortholog); hydro-lyase activity (ortholog); monooxygenase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); prostaglandin metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955555 167634 183572 + 102010839 AGCD01073024;GBDK01317297;XM_005412321 XP_005412378 MODEL 8716572 pseudo LOC102006974 40S ribosomal protein S10 pseudogene NW_004955404 27148218 27148697 + 102006974 AGCD01003909 MODEL 8780653 protein-coding LOC102005876 mRNA cap guanine-N7 methyltransferase-like NW_004956031 668 8233 + 102005876 AGCD01078913;GBDK01394335;XM_013510216 XP_013365670 MODEL 8890541 ncrna LOC102013630 uncharacterized LOC102013630 NW_004955504 2770536 2808486 - 102013630 AGCD01064860;AGCD01064861;XR_001231542;XR_264290;XR_264291 MODEL 8942159 protein-coding CUNH8orf34 chromosome unknown C8orf34 homolog ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955444 10700697 11071804 - 102006622 AGCD01039024;AGCD01039025;AGCD01039026;AGCD01039027;AGCD01039028;AGCD01039029;AGCD01039030;AGCD01039031;AGCD01039032;AGCD01039033;GBBH01229672;GBDI01263306;XM_013518171;XM_013518172;XM_013518173 XP_013373625;XP_013373626;XP_013373627 MODEL 8918719 protein-coding LOC102003015 olfactory receptor 51G2-like NW_004955414 20898763 20899722 - 102003015 AGCD01015395;XM_005380485 XP_005380542 MODEL 126903046 protein-coding RBM46 RNA binding motif protein 46 8836933 protein-coding Dlgap2 DLG associated protein 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955403 57965571 58493946 - 102016338 AGCD01003170;AGCD01003171;AGCD01003172;AGCD01003173;AGCD01003174;AGCD01003175;AGCD01003176;AGCD01003177;AGCD01003178;AGCD01003179;AGCD01003180;AGCD01003181;AGCD01003182;GBDK01415037;XM_005373860;XM_005373861;XM_013515038 XP_005373917;XP_005373918;XP_013370492 MODEL 8786989 protein-coding Aff4 ALF transcription elongation factor 4 INVOLVED IN response to endoplasmic reticulum stress (ortholog); spermatid development (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); autism spectrum disorder (ortholog); bone development disease (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); fibrillar center (ortholog) NW_004955408 4247730 4305194 - 102007409 AGCD01008099;GBDI01117383;XM_013508370 XP_013363824 MODEL 8875385 protein-coding Trmt11 tRNA methyltransferase 11 ENCODES a protein that exhibits tRNA (guanine(10)-N2)-methyltransferase activity (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); methyltransferase complex (ortholog); mitochondrion (ortholog) NW_004955436 7274848 7318762 + 102004850 AGCD01033704;GBDI01353599;XM_005389162;XM_005389163;XM_013516690 XP_005389219;XP_005389220;XP_013372144 MODEL 9044425 pseudo LOC102012045 chromobox protein homolog 3 pseudogene NW_004955402 54299108 54299688 - 102012045 AGCD01001394 MODEL 8889595 protein-coding Aldh8a1 aldehyde dehydrogenase 8 family member A1 ENCODES a protein that exhibits aminomuconate-semialdehyde dehydrogenase (NAD+) activity (ortholog); retinal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); retinal metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH cholestasis (ortholog); hepatocellular carcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955439 1773884 1794325 + 102004121 AGCD01035627;GBCQ01041842;XM_005390500;XM_013517432 XP_005390557;XP_013372886 MODEL 8828936 protein-coding Washc4 WASH complex subunit 4 INVOLVED IN cognition (ortholog); endolysosomal toll-like receptor signaling pathway (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 43 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN BLOC-1 complex (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955405 39451423 39499295 + 102016230 AGCD01005500;AGCD01005501;GBDF01188550;XM_005374605 XP_005374662 MODEL 8774344 protein-coding Prep prolyl endopeptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN angiotensin maturation (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amnestic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955411 30698112 30797096 - 102003527 AGCD01012263;GBCB01024464;GBDI01221451;XM_013510786 XP_013366240 MODEL 8919601 protein-coding Apobec2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cytidine to uridine editing (ortholog); mRNA modification (ortholog); positive regulation of gene expression via chromosomal CpG island demethylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955437 7725092 7735892 + 102008768 AGCD01034465;GBCB01003930;XM_005389676 XP_005389733 MODEL 8954133 protein-coding Ankrd31 ankyrin repeat domain 31 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation involved in reciprocal meiotic recombination (ortholog); positive regulation of meiotic DNA double-strand break formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955425 25483400 25647904 + 102027087 AGCD01025921;AGCD01025922;AGCD01025923;AGCD01025924;AGCD01025925;GBDF01023868;XM_013514798 XP_013370252 MODEL 8842261 pseudo LOC102008143 ras-related protein Rab-28 pseudogene NW_004955435 20586269 20586938 - 102008143 AGCD01033457 MODEL 9000283 protein-coding Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone H3K14ac reader activity (ortholog); INVOLVED IN bone development (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); gene expression (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955588 290497 338438 + 102017932 AGCD01076102;AGCD01076103;AGCD01076104;AGCD01076105;GBDF01085935;XM_005414466;XM_005414467;XM_005414468;XM_005414469;XM_013509910;XM_013509911 XP_005414523;XP_005414524;XP_005414525;XP_005414526;XP_013365364;XP_013365365 MODEL 39134342 misc_rna 7SK 7SK RNA 8912452 protein-coding Cd274 CD274 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); immune response (ortholog); negative regulation of activated T cell proliferation (ortholog); ASSOCIATED WITH acute myocarditis (ortholog); adult T-cell leukemia/lymphoma (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); early endosome membrane (ortholog); endomembrane system (ortholog) NW_004955434 9487309 9508366 + 102003272 AGCD01032303;GBDI01086689;XM_005388660;XM_013516371;XM_013516372;XM_013516373;XM_013516374 XP_005388717;XP_013371825;XP_013371826;XP_013371827;XP_013371828 MODEL 8829137 protein-coding Acaca acetyl-CoA carboxylase alpha ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to prostaglandin E stimulus (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; Leigh disease pathway; malonic aciduria pathway; ASSOCIATED WITH Acetyl-Coa Carboxylase Deficiency (ortholog); acute myeloid leukemia (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog) NW_004955451 679033 909892 + 102024295 AGCD01042950;AGCD01042951;AGCD01042952;AGCD01042953;AGCD01042954;GBCQ01129882;GBDF01277014;XM_013519172 XP_013374626 MODEL 39132271 rrna 5S_rRNA 5S ribosomal RNA 8846337 ncrna LOC102006975 uncharacterized LOC102006975 NW_004955405 613272 642517 + 102006975 AGCD01004581;AGCD01004582;GBDF01305850;XR_001235174;XR_001235177;XR_259353;XR_259354 MODEL 8849920 pseudo LOC102011632 dnaJ homolog subfamily B member 6-like NW_004955410 15884222 15890903 + 102011632 AGCD01010941 MODEL 9056289 pseudo LOC102008504 nuclear receptor subfamily 5 group A member 2 pseudogene NW_004955408 668410 669063 + 102008504 AGCD01007925 MODEL 8847745 protein-coding Snupn snurportin 1 INVOLVED IN cytoskeleton organization (ortholog); protein complex oligomerization (ortholog); protein tetramerization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 29 (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NLS-dependent protein nuclear import complex (ortholog) NW_004955450 2701496 2720971 + 102026376 AGCD01042395;AGCD01042396;AGCD01042397;AGCD01042398;GBDF01083761;XM_005393503;XM_005393504;XM_013519045 XP_005393560;XP_005393561;XP_013374499 MODEL 39134037 misc_rna 7SK 7SK RNA 9005465 protein-coding LOC102008878 olfactory receptor 5AN1-like NW_004955511 3869171 3870109 + 102008878 AGCD01066479;XM_005408266 XP_005408323 MODEL 10280226 protein-coding LOC106150332 translation initiation factor IF-2-like NW_004955472 676479 677848 - 106150332 AGCD01053347;GBDF01008219;XM_013522958 XP_013378412 MODEL 8753593 protein-coding Atp6v1d ATPase H+ transporting V1 subunit D ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cilium assembly (ortholog); positive regulation of TORC1 signaling (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955466 2855597 2869319 + 102017643 AGCD01050769;GBDF01001216;XM_005399088;XM_005399089 XP_005399145;XP_005399146 MODEL 8856999 protein-coding Cdk13 cyclin dependent kinase 13 ENCODES a protein that exhibits cyclin binding (ortholog); protein kinase binding (ortholog); RNA polymerase II CTD heptapeptide repeat kinase activity (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); hemopoiesis (ortholog); negative regulation of stem cell differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); anemia (ortholog); anxiety disorder (ortholog); FOUND IN cyclin K-CDK13 complex (ortholog); nuclear cyclin-dependent protein kinase holoenzyme complex (ortholog); nuclear speck (ortholog) NW_004955460 3590854 3701148 - 102016677 AGCD01048415;AGCD01048416;GBBH01051562;GBDK01237891;XM_013521155 XP_013376609 MODEL 8842478 protein-coding Trmt112 tRNA methyltransferase activator subunit 11-2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein methyltransferase activity (ortholog); tRNA methyltransferase activator activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); rRNA methylation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); methyltransferase complex (ortholog) NW_004955422 20767599 20768505 + 102012548 AGCD01023086;GBDF01007908;XM_005384605 XP_005384662 MODEL 8717592 protein-coding Slc30a6 solute carrier family 30 member 6 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN Golgi to endosome transport (ortholog); regulation of zinc ion transport (ortholog); zinc ion import into Golgi lumen (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955441 528256 567382 + 102021600 AGCD01036710;AGCD01036711;AGCD01036712;GBDF01128354;XM_005390837;XM_013517595 XP_005390894;XP_013373049 MODEL 8783182 protein-coding Washc5 WASH complex subunit 5 INVOLVED IN endosomal transport (ortholog); lysosome organization (ortholog); meiotic spindle assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955461 145993 199274 - 102028387 AGCD01048791;AGCD01048792;GBCB01089643;XM_005397982;XM_005397983;XM_005397985;XM_013521306;XM_013521307 XP_005398039;XP_005398040;XP_005398042;XP_013376760;XP_013376761 MODEL 8865512 pseudo LOC102004812 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955416 26864290 26864700 - 102004812 AGCD01017606 MODEL 39133753 misc_rna 7SK 7SK RNA 8705388 ncrna LOC102022326 uncharacterized LOC102022326 NW_004955538 1051081 1056074 - 102022326 AGCD01071043;GBDF01261166;XR_264794 MODEL 8824956 protein-coding Clcc1 chloride channel CLIC like 1 ENCODES a protein that exhibits chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN chloride transport (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955435 12387575 12408801 - 102021039 AGCD01033147;GBDK01016230;XM_005388837;XM_005388838;XM_005388839;XM_013516519;XM_013516521 XP_005388894;XP_005388895;XP_005388896;XP_013371973;XP_013371975 MODEL 8826691 protein-coding Aspdh aspartate dehydrogenase domain containing ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955559 652639 655084 + 102017070 AGCD01073606;GBDF01223691;XM_005412778;XM_013509060 XP_005412835;XP_013364514 MODEL 9030550 protein-coding CUNH8orf48 chromosome unknown C8orf48 homolog NW_004955463 3553732 3557304 - 102013913 AGCD01049590;GBDF01125165;XM_005415371 XP_005415428 MODEL 9018464 protein-coding Cd276 CD276 molecule ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of T cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955450 3884437 3896416 - 102029252 AGCD01042447;AGCD01042448;GBBH01115553;GBCB01111175;XM_013519040 XP_013374494 MODEL 8880245 protein-coding Il11ra interleukin 11 receptor subunit alpha ENCODES a protein that exhibits interleukin-11 binding (ortholog); interleukin-11 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); decidualization (ortholog); developmental process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); signaling receptor complex (ortholog) NW_004955472 1474802 1485352 - 102021002 AGCD01053395;GBBH01063003;XM_005401045;XM_013523015;XM_013523016;XM_013523017;XM_013523018 XP_005401102;XP_013378469;XP_013378470;XP_013378471;XP_013378472 MODEL 8770272 pseudo LOC102007347 heterogeneous nuclear ribonucleoprotein A1-like 2 NW_004955494 2464464 2465407 + 102007347 AGCD01061438 MODEL 9047487 pseudo LOC102013992 DCN1-like protein 1 pseudogene NW_004955403 2970789 2975016 - 102013992 AGCD01001743 MODEL 8903454 protein-coding LOC102009640 olfactory receptor 10AG1-like NW_004955511 857241 858197 - 102009640 AGCD01066345;XM_013506363 XP_013361817 MODEL 8745538 pseudo LOC102013247 transmembrane protein 216-like NW_004955453 14243472 14246662 + 102013247 AGCD01044860 MODEL 9007790 protein-coding Btnl10 Butyrophilin-like protein 10 NW_004955581 62183 69040 + 102011066 AGCD01075656;GBBH01076877;XM_005414227 XP_005414284 MODEL 9059283 protein-coding Bltp3a bridge-like lipid transfer protein family member 3A ENCODES a protein that exhibits histone deacetylase binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN late endosome (ortholog) NW_004955437 2844544 2905073 + 102012244 AGCD01034288;AGCD01034289;AGCD01034290;AGCD01034291;AGCD01034292;GBDF01200537;XM_005390117 XP_005390174 MODEL 8828984 protein-coding Fgf4 fibroblast growth factor 4 INVOLVED IN apoptotic process involved in morphogenesis (ortholog); cartilage condensation (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Pilonidal Sinus (ortholog) NW_004955422 16362418 16364126 + 102016820 AGCD01022896;GBDF01078711;XM_005384960 XP_005385017 MODEL 39131817 rrna 5S_rRNA 5S ribosomal RNA 8817818 protein-coding LOC102004059 olfactory receptor 2D3-like NW_004955414 22615797 22616720 - 102004059 AGCD01015466;XM_005380178 XP_005380235 MODEL 8740356 protein-coding LOC102010840 serine protease 29-like NW_004955442 15998729 16000624 + 102010840 AGCD01037890;GBBH01115240;XM_005391588 XP_005391645 MODEL 8901342 protein-coding Adam2 ADAM metallopeptidase domain 2 INVOLVED IN adult behavior (ortholog); cell adhesion (ortholog); gene expression (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); protein-containing complex (ortholog) NW_004955403 50046262 50115004 + 102005989 AGCD01002955;AGCD01002956;AGCD01002957;AGCD01002958;AGCD01002959;GBDF01007405;XM_005373747;XM_013514227 XP_005373804;XP_013369681 MODEL 39134160 misc_rna 7SK 7SK RNA 8967243 protein-coding LOC102004444 beta-defensin 1-like ENCODES a protein that exhibits double-stranded DNA binding; CCR6 chemokine receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN killing of cells of another organism; antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); calcium-mediated signaling (ortholog); ASSOCIATED WITH otitis media; Actinobacillus Infections (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); microvesicle (ortholog) NW_004955403 53643328 53644361 + 102004444 AGCD01003067;AY128668;GBDI01106599;XM_005373833 AAM97293;P83943;XP_005373890 MODEL 8981436 protein-coding Acacb acetyl-CoA carboxylase beta ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); D-glucose import across plasma membrane (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial fatty acid beta-oxidation multienzyme complex (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955455 10282308 10427439 + 102002995 AGCD01045951;AGCD01045952;AGCD01045953;AGCD01045954;AGCD01045955;AGCD01045956;GBDF01086406;XM_005396484;XM_013520458;XM_013520459;XM_013520460;XM_013520461 XP_005396541;XP_013375912;XP_013375913;XP_013375914;XP_013375915 MODEL 8983021 ncrna LOC102013631 uncharacterized LOC102013631 NW_004955427 18854952 18901498 - 102013631 AGCD01027352;AGCD01027353;AGCD01027354;GBDF01196054;XR_261278;XR_261279;XR_261280 MODEL 8764864 protein-coding LOC102005878 RNA-binding protein NOB1-like NW_004957102 190 886 + 102005878 AGCD01080498;XM_005415224 XP_005415281 MODEL 8917169 protein-coding Epha4 EPH receptor A4 ENCODES a protein that exhibits DH domain binding (ortholog); ephrin receptor activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN adherens junction organization (ortholog); adult walking behavior (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); axonal growth cone (ortholog) NW_004955453 12099800 12240199 + 102026827 AGCD01044828;AGCD01044829;GBBH01055701;XM_005395504 XP_005395561 MODEL 8744360 protein-coding Rbm47 RNA binding motif protein 47 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cytidine to uridine editing (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955443 6940523 7100130 + 102016758 AGCD01038268;AGCD01038269;AGCD01038270;AGCD01038271;AGCD01038272;GBBH01118381;XM_005391951;XM_005391952;XM_005391953;XM_005391954 XP_005392008;XP_005392009;XP_005392010;XP_005392011 MODEL 8880324 protein-coding Aldh9a1 aldehyde dehydrogenase 9 family member A1 ENCODES a protein that exhibits 4-trimethylammoniobutyraldehyde dehydrogenase (NAD+) activity (ortholog); acetaldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955462 10998147 11017360 + 102004148 AGCD01049381;AGCD01049382;AGCD01049383;GBCQ01009425;GBDF01000076;XM_013521373 XP_013376827 MODEL 8726679 pseudo LOC102010047 nucleolar and spindle-associated protein 1 pseudogene NW_004955413 13435713 13437079 - 102010047 AGCD01014015 MODEL 9021298 ncrna LOC102012046 uncharacterized LOC102012046 NW_004955403 2740603 2756599 + 102012046 AGCD01001738;GBDF01080335;XR_259139 MODEL 8966075 protein-coding Rpsa ribosomal protein SA ENCODES a protein that exhibits DNA binding (ortholog); laminin binding (ortholog); ribosome binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cell-cell adhesion (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); arrhythmogenic right ventricular dysplasia 5 (ortholog); FOUND IN basement membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) NW_004955420 29978160 29983544 - 102012437 AGCD01021522;AGCD01021523;AGCD01021524;GBCC01000804;GBDI01017836;XM_013513553 XP_013369007 MODEL 8892948 protein-coding LOC102006979 keratin-associated protein 20-2-like NW_004955407 30156701 30156859 + 102006979 AGCD01007628;XM_005375640 XP_005375697 MODEL 9014291 pseudo LOC102008506 nucleoplasmin-3 pseudogene NW_004955409 22543962 22544416 - 102008506 AGCD01010041 MODEL 8947196 protein-coding LOC102018232 prostatic spermine-binding protein-like NW_004955442 14575069 14588232 - 102018232 AGCD01037827;AGCD01037828;AGCD01037829;GBDF01305030;XM_005391408;XM_005391409;XM_013517784 XP_005391465;XP_005391466;XP_013373238 MODEL 8975019 protein-coding Setdb2 SET domain bifurcated histone lysine methyltransferase 2 ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cell cycle (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955431 2899849 2943091 + 102024712 AGCD01029942;GBCC01045530;XM_005387590;XM_005387591;XM_005387592;XM_013515747;XM_013515748 XP_005387647;XP_005387648;XP_005387649;XP_013371201;XP_013371202 MODEL 8926148 pseudo LOC102008145 kinesin-associated protein 3 pseudogene NW_004955436 21887648 21900523 - 102008145 AGCD01034080 MODEL 9039345 protein-coding Ankrd33 ankyrin repeat domain 33 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955547 2263769 2269180 + 102028135 AGCD01072265;GBDK01351700;XM_013508507;XM_013508508;XM_013508509;XM_013508510;XM_013508511 XP_013363961;XP_013363962;XP_013363963;XP_013363964;XP_013363965 MODEL 9066751 protein-coding Catsperq catsper channel auxiliary subunit theta ASSOCIATED WITH cervical cancer (ortholog); Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955454 2974713 2976454 - 102024528 AGCD01045044;GBDF01124984;XM_005396110 XP_005396167 MODEL 8826132 protein-coding Cep72 centrosomal protein 72 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN centriole replication (ortholog); gamma-tubulin complex localization (ortholog); regulation of protein localization to centrosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) NW_004955504 305181 335791 + 102022106 AGCD01064817;GBDF01050401;XM_005407003;XM_013505910;XM_013505911;XM_013505912;XM_013505913;XM_013505914;XR_001231552;XR_001231553 XP_005407060;XP_013361364;XP_013361365;XP_013361366;XP_013361367;XP_013361368 MODEL 8946775 protein-coding Atp6v1e1 ATPase H+ transporting V1 subunit E1 ENCODES a protein that exhibits ATPase binding (ortholog); guanyl nucleotide exchange factor activator activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); positive regulation of TORC1 signaling (ortholog); proton transmembrane transport (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IIC (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955454 5669883 5688623 - 102030382 AGCD01045180;AGCD01045181;GBDK01043238;XM_005395971 XP_005396028 MODEL 8770324 protein-coding Plekha5 pleckstrin homology domain containing A5 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN reproductive system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); BILATERAL CLEFT LIP (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955413 15239070 15470137 + 102012418 AGCD01014067;AGCD01014068;AGCD01014069;AGCD01014070;AGCD01014071;AGCD01014072;AGCD01014073;GBBH01165630;GBDF01085078;XM_013511432;XM_013511433;XM_013511434;XM_013511435 XP_013366886;XP_013366887;XP_013366888;XP_013366889 MODEL 8964043 protein-coding Slc30a7 solute carrier family 30 member 7 ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); zinc ion import into Golgi lumen (ortholog); zinc ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog) NW_004955435 5530591 5609613 + 102007585 AGCD01032891;AGCD01032892;GBBH01036681;XM_005388805 XP_005388862 MODEL 39132012 rrna 5S_rRNA 5S ribosomal RNA 8743367 protein-coding LOC102003016 uncharacterized LOC102003016 NW_004955415 11944706 11993056 - 102003016 AGCD01016181;AGCD01016182;GBDF01221008;XM_013512125 XP_013367579 MODEL 9016077 protein-coding Afg1l AFG1 like ATPase INVOLVED IN mitochondrial protein catabolic process (ortholog); mitochondrial protein quality control (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955411 33386568 33617721 + 102011418 AGCD01012355;AGCD01012356;AGCD01012357;AGCD01012358;AGCD01012359;AGCD01012360;AGCD01012361;AGCD01012362;AGCD01012363;AGCD01012364;AGCD01012365;AGCD01012366;AGCD01012367;AGCD01012368;AGCD01012369;AGCD01012370;AGCD01012371;AGCD01012372;AGCD01012373;GBDF01055437;XM_005377845;XM_005377846;XM_013510900 XP_005377902;XP_005377903;XP_013366354 MODEL 8773479 ncrna LOC102011636 uncharacterized LOC102011636 NW_004955412 12761973 12776122 - 102011636 AGCD01012825;GBDF01277129;XR_001232873 MODEL 8894279 protein-coding Apobec4 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 NW_004955406 22425097 22431148 - 102028935 AGCD01006158;GBDF01001541;XM_013521574 XP_013377028 MODEL 8887376 protein-coding Clcf1 cardiotrophin like cytokine factor 1 ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cell surface receptor signaling pathway (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH cold-induced sweating syndrome (ortholog); cold-induced sweating syndrome 2 (ortholog); COVID-19 (ortholog); FOUND IN CNTFR-CLCF1 complex (ortholog); CRLF-CLCF1 complex (ortholog); extracellular region (ortholog) NW_004955422 18097779 18108628 + 102020812 AGCD01022937;GBDJ01016548;XM_005384338;XM_005384339 XP_005384395;XP_005384396 MODEL 8979146 protein-coding LOC102007351 melanoma-associated antigen 10-like NW_004955498 6985853 6996187 - 102007351 AGCD01063140;XM_005406439 XP_005406496 MODEL 39134038 misc_rna 7SK 7SK RNA 8926045 protein-coding Rbm48 RNA binding motif protein 48 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); U12-type catalytic step 2 spliceosome (ortholog) NW_004955432 9461507 9498099 + 102004630 AGCD01030906;GBDF01196141;XM_005388020;XM_005388021;XM_013515938;XM_013515939;XR_261518 XP_005388077;XP_005388078;XP_013371392;XP_013371393 MODEL 39134343 misc_rna 7SK 7SK RNA 8839304 protein-coding Cdk14 cyclin dependent kinase 14 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytoplasmic cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955432 7787600 8335726 + 102023387 AGCD01030866;AGCD01030867;AGCD01030868;AGCD01030869;AGCD01030870;AGCD01030871;AGCD01030872;AGCD01030873;AGCD01030874;GBDF01088455;XM_005387994;XM_005387996;XM_013516047 XP_005388051;XP_005388053;XP_013371501 MODEL 8797418 pseudo LOC102004813 40S ribosomal protein S2-like NW_004955416 5201588 5210682 + 102004813 AGCD01016904 MODEL 8835693 protein-coding Bltp3b bridge-like lipid transfer protein family member 3B ENCODES a protein that exhibits GARP complex binding (ortholog); lipid transfer activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); intermembrane lipid transfer (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog) NW_004955405 35814803 35935553 - 102019020 AGCD01005402;AGCD01005403;AGCD01005404;AGCD01005405;GBDJ01165887;XM_013518586 XP_013374040 MODEL 8866008 pseudo LOC102022327 60S ribosomal protein L32 pseudogene NW_004955437 21682919 21683367 + 102022327 AGCD01034919 MODEL 8808855 protein-coding Prepl prolyl endopeptidase like ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); regulation of synaptic vesicle exocytosis (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoskeleton (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) NW_004955441 11418299 11453889 - 102004977 AGCD01037107;AGCD01037108;AGCD01037109;GBBH01001037;XM_005390951;XM_005390952;XM_005390955;XM_005390957;XM_005390961;XM_013517570;XM_013517571;XM_013517572;XM_013517573;XM_013517574;XM_013517575;XM_013517576;XM_013517577 XP_005391008;XP_005391009;XP_005391012;XP_005391014;XP_005391018;XP_013373024;XP_013373025;XP_013373026;XP_013373027;XP_013373028;XP_013373029;XP_013373030;XP_013373031 MODEL 39134161 misc_rna 7SK 7SK RNA 8880790 protein-coding Il12a interleukin 12A ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-12 beta subunit binding (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); Chronic Hepatitis B (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955448 10611131 10617911 + 102022032 AGCD01041496;GBCE01162263;GBDK01148444;XM_005393161 XP_005393218 MODEL 8822871 protein-coding Cd28 CD28 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); negative regulation of gene expression (ortholog); negative thymic T cell selection (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) NW_004955457 11159769 11253099 - 102022362 AGCD01046964;AGCD01046965;GBDI01383439;XM_005397015;XM_005397016 XP_005397072;XP_005397073 MODEL 8864939 protein-coding CUNH8orf58 chromosome unknown C8orf58 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955403 46024484 46027834 + 102012917 AGCD01002849;GBCB01089866;GBCQ01177202;XM_005373682 XP_005373739 MODEL 8945384 protein-coding Aspg asparaginase ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); asparaginase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Anaphylaxis (ortholog); anemia (ortholog) NW_004955538 2765215 2785390 + 102022121 AGCD01071138;AGCD01071139;GBDK01337693;XM_005410824;XM_005410825;XM_005410826;XM_005410827;XR_001232094;XR_264804 XP_005410881;XP_005410882;XP_005410883;XP_005410884 MODEL 8945117 pseudo LOC102009643 tubulin alpha-1C chain-like NW_004955515 4374447 4376136 + 102009643 AGCD01067319 MODEL 9023084 protein-coding Aldoa aldolase, fructose-bisphosphate A ENCODES a protein that exhibits fructose-bisphosphate aldolase activity (ortholog); protease binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular response to glucose starvation (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH cystadenoma (ortholog); hereditary fructose intolerance syndrome (ortholog); spondylocostal dysostosis 5 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955493 6904931 6910682 - 102023923 AGCD01061147;GBDI01013338;XM_005405193;XM_005405194;XM_013504781 XP_005405250;XP_005405251;XP_013360235 MODEL 8938864 protein-coding LOC102013249 short-chain dehydrogenase/reductase family 16C member 6-like NW_004955454 15372653 15401544 - 102013249 AGCD01045493;GBCC01001125;XM_005396086;XM_005396087 XP_005396143;XP_005396144 MODEL 8854618 protein-coding Wasl WASP like actin nucleation promoting factor ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); dendritic spine morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atopic dermatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cap (ortholog); cell leading edge (ortholog); cytoplasm (ortholog) NW_004955479 5167851 5200512 - 102015717 AGCD01056340;GBCQ01037898;XM_005402337 XP_005402394 MODEL 9063930 protein-coding Apobr apolipoprotein B receptor ENCODES a protein that exhibits lipoprotein particle receptor activity (ortholog); very-low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN foam cell differentiation (ortholog); triglyceride metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955493 6707917 6712108 + 102017350 AGCD01061131;GBDK01316922;XM_005405171 XP_005405228 MODEL 9044068 protein-coding Catspert catsper channel auxiliary subunit tau INVOLVED IN calcium ion transmembrane transport (ortholog); flagellated sperm motility (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN CatSper complex (ortholog); sperm flagellum (ortholog); sperm principal piece (ortholog) NW_004955493 8356859 8518863 - 102021457 AGCD01061292;AGCD01061293;AGCD01061294;AGCD01061295;AGCD01061296;AGCD01061297;AGCD01061298;AGCD01061299;AGCD01061300;AGCD01061301;AGCD01061302;AGCD01061303;AGCD01061304;AGCD01061305;AGCD01061306;AGCD01061307;GBDF01044480;XM_013504749 XP_013360203 MODEL 39134344 misc_rna 7SK 7SK RNA 9019618 protein-coding Fgf5 fibroblast growth factor 5 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); glial cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); familial isolated trichomegaly (ortholog); thymoma (ortholog) NW_004955433 4521566 4540672 + 102025037 AGCD01031469;AGCD01031470;XM_005388218;XM_013516118 XP_005388275;XP_013371572 MODEL 8768483 protein-coding Dlgap3 DLG associated protein 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); molecular adaptor activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); modulation of chemical synaptic transmission (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cholinergic synapse (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955452 12981375 13039036 - 102014526 AGCD01044376;GBDF01076075;XM_005395128 XP_005395185 MODEL 8846267 protein-coding LOC102004061 olfactory receptor 52E4-like NW_004955414 21799689 21800671 + 102004061 AGCD01015432;XM_013511735 XP_013367189 MODEL 8717841 gene LOC102010841 Ig lambda-2 chain C regions-like NW_004955442 17155684 17169023 - 102010841 AGCD01037943;AGCD01037944;XM_005391686;XM_005391687 MODEL 8890214 protein-coding Slc30a8 solute carrier family 30 member 8 ENCODES a protein that exhibits protein homodimerization activity (ortholog); zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); insulin processing (ortholog); insulin secretion (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); maturity-onset diabetes of the young type 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955417 23207146 23239170 + 102030631 AGCD01018434;GBDF01144404;XM_013512711 XP_013368165 MODEL 8962039 pseudo LOC102013635 ornithine aminotransferase, mitochondrial pseudogene NW_004955428 10060530 10066301 + 102013635 AGCD01027854 MODEL 8732046 protein-coding LOC102004445 collagen alpha-1(II) chain NW_004955404 512703 521797 + 102004445 AGCD01003202;GBCE01072410;XM_005373945 XP_005374002 MODEL 10276227 protein-coding Snurf SNRPN upstream open reading frame ENCODES a protein that exhibits ATPase binding (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955416 31655664 31668803 + 106146229 AGCD01017766;AGCD01017767;AGCD01017768;XM_005381679 XP_005381736 MODEL 8831810 protein-coding Adam22 ADAM metallopeptidase domain 22 INVOLVED IN adult locomotory behavior (ortholog); gliogenesis (ortholog); myelination in peripheral nervous system (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); developmental and epileptic encephalopathy 61 (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); glutamatergic synapse (ortholog) NW_004955432 5306018 5536282 + 102026782 AGCD01030778;AGCD01030779;AGCD01030780;AGCD01030781;AGCD01030782;AGCD01030783;AGCD01030784;AGCD01030785;AGCD01030786;GBBH01146350;GBCE01145833;XM_013516010;XM_013516011;XM_013516012;XM_013516013;XM_013516014 XP_013371464;XP_013371465;XP_013371466;XP_013371467;XP_013371468 MODEL 8811918 pseudo LOC102008879 protein kinase C iota type pseudogene NW_004955430 16780162 16781452 + 102008879 AGCD01029645 MODEL 8703413 protein-coding Acad10 acyl-CoA dehydrogenase family member 10 ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); kinase activity (ortholog); INVOLVED IN fatty acid catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955482 8282530 8327511 + 102028967 AGCD01057515;GBDF01160099;XM_005403170;XM_013503680;XM_013503681;XM_013503682;XM_013503683 XP_005403227;XP_013359134;XP_013359135;XP_013359136;XP_013359137 MODEL 8784321 protein-coding Epha5 EPH receptor A5 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH malignant astrocytoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); cell periphery (ortholog) NW_004955447 7066111 7382046 + 102015063 AGCD01040810;AGCD01040811;AGCD01040812;AGCD01040813;AGCD01040814;AGCD01040815;AGCD01040816;AGCD01040817;AGCD01040818;AGCD01040819;GBCQ01016524;XM_005392842;XM_013518577 XP_005392899;XP_013374031 MODEL 8877899 protein-coding Rptn repetin FOUND IN cornified envelope (ortholog) NW_004955589 245804 252190 + 102009443 AGCD01076159;AGCD01076160;GBDI01105484;XM_013509952 XP_013365406 MODEL 8973101 protein-coding LOC102012047 PRAME family member 9/15-like NW_004955618 227974 229557 - 102012047 AGCD01077320;XM_013510149 XP_013365603 MODEL 8744163 protein-coding LOC102010049 olfactory receptor 52H1-like NW_004955414 21628748 21631134 + 102010049 AGCD01015424;XM_005380100 XP_005380157 MODEL 8910318 ncrna LOC102008507 uncharacterized LOC102008507 NW_004955410 6953396 6959673 - 102008507 AGCD01010708;GBDF01017313;XR_259822 MODEL 8831291 pseudo LOC102007353 60S ribosomal protein L31 pseudogene NW_004955426 12943982 12944411 + 102007353 AGCD01026352 MODEL 9050663 protein-coding Trmt13 tRNA methyltransferase 13 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955435 4885910 4902759 + 102022535 AGCD01032861;GBDF01002213;GBDJ01075836;XM_013516438 XP_013371892 MODEL 8984267 protein-coding Adam23 ADAM metallopeptidase domain 23 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN glutamatergic synapse (ortholog); presynaptic membrane (ortholog); trans-synaptic protein complex (ortholog) NW_004955457 8362639 8518281 - 102028163 AGCD01046908;AGCD01046909;AGCD01046910;AGCD01046911;GBBH01008349;GBDJ01144488;XM_013520784;XM_013520785 XP_013376238;XP_013376239 MODEL 8886344 pseudo LOC102006983 39S ribosomal protein L32, mitochondrial pseudogene NW_004955408 16943160 16949169 + 102006983 AGCD01008449 MODEL 39133754 misc_rna 7SK 7SK RNA 8723936 protein-coding Ankrd33b ankyrin repeat domain 33B ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955426 363297 383013 + 102004090 AGCD01026001;GBDI01359209;XM_005386256 XP_005386313 MODEL 39131818 rrna 5S_rRNA 5S ribosomal RNA 9010735 protein-coding Apoc1 apolipoprotein C1 ENCODES a protein that exhibits fatty acid binding (ortholog); lipase inhibitor activity (ortholog); phospholipase inhibitor activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); chylomicron remnant clearance (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cholangiocarcinoma (ortholog); congestive heart failure (ortholog); FOUND IN endoplasmic reticulum (ortholog); high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) NW_004955555 2005962 2007239 + 102028343 AGCD01073121;GBCB01060655;GBDI01216453;XM_005412478 XP_005412535 MODEL 8717204 protein-coding Cdk15 cyclin dependent kinase 15 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); PARTICIPATES IN Wnt signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955457 12878736 12966434 - 102010553 AGCD01047031;AGCD01047032;AGCD01047033;GBDI01384668;XM_005397066 XP_005397123 MODEL 8983508 protein-coding Prex1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); neutrophil chemotaxis (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); dendritic shaft (ortholog); growth cone (ortholog) NW_004955445 9229775 9401277 + 102028032 AGCD01039626;GBDI01168746;GBDI01168750;XM_013518315 XP_013373769 MODEL 8842186 protein-coding LOC102005879 keratin, type I cytoskeletal 42-like NW_004955451 15945587 15951095 - 102005879 AGCD01043641;GBBH01099405;XM_005394414 XP_005394471 MODEL 8766172 ncrna LOC102004449 uncharacterized LOC102004449 NW_004955405 42046220 42053786 + 102004449 AGCD01005576;GBBH01198079;XR_001235965;XR_259459 MODEL 9012504 pseudo LOC102011641 uracil-DNA glycosylase pseudogene NW_004955413 26353261 26357509 - 102011641 AGCD01014435;XM_005379326;XM_005379327 MODEL 8986972 ncrna LOC102013993 uncharacterized LOC102013993 NW_004955403 11680087 11685223 - 102013993 AGCD01001958;GBBH01086932;XR_259171 MODEL 9048784 protein-coding Btnl2 butyrophilin like 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of interleukin-2 production (ortholog); positive regulation of T cell proliferation (ortholog); ASSOCIATED WITH berylliosis (ortholog); coronary artery disease (ortholog); Graves' disease (ortholog); FOUND IN membrane (ortholog) NW_004955437 1084330 1101751 - 102018528 AGCD01034189;GBDJ01214554;XM_005389446;XM_005389447;XM_005389448 XP_005389503;XP_005389504;XP_005389505 MODEL 8927679 pseudo LOC102018233 heat shock cognate 71 kDa protein pseudogene NW_004955557 808259 809210 + 102018233 AGCD01073262 MODEL 39134039 misc_rna 7SK 7SK RNA 8723979 protein-coding Afg2a AAA ATPase AFG2A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); preribosome binding (ortholog); INVOLVED IN brain development (ortholog); DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); astigmatism (ortholog); FOUND IN ATPase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955428 17525388 17823478 - 102010822 AGCD01028044;AGCD01028045;AGCD01028046;AGCD01028047;AGCD01028048;AGCD01028049;AGCD01028050;AGCD01028051;AGCD01028052;GBDF01224056;XM_005386754;XM_005386755 XP_005386811;XP_005386812 MODEL 8865603 protein-coding Cep76 centrosomal protein 76 INVOLVED IN regulation of centriole replication (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) NW_004955402 870090 888577 + 102009667 AGCD01000036;AGCD01000037;GBDF01084600;XM_005372555 XP_005372612 MODEL 8970770 protein-coding Aldob aldolase, fructose-bisphosphate B ENCODES a protein that exhibits ATPase binding (ortholog); cytoskeletal protein binding (ortholog); fructose binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); fructose catabolic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; fructose and mannose metabolic pathway; fructosuria pathway; ASSOCIATED WITH autoimmune hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetes mellitus (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); microtubule organizing center (ortholog) NW_004955419 24377427 24389909 + 102008730 AGCD01020345;GBCQ01007633;XM_005382799 XP_005382856 MODEL 39132013 rrna 5S_rRNA 5S ribosomal RNA 8767633 protein-coding LOC102004820 olfactory receptor 13C9 NW_004955419 21786853 21787806 + 102004820 AGCD01020283;XM_005382787 XP_005382844 MODEL 8790886 protein-coding Setx senataxin ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-3' DNA/RNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to oxidative stress (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 4 (ortholog); FOUND IN axon (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955513 1718432 1776133 - 102026139 AGCD01066862;GBDK01147152;GBDK01147154;XM_005408377 XP_005408434 MODEL 8788066 protein-coding Dlgap4 DLG associated protein 4 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cholinergic synapse (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955422 25098914 25221238 - 102023161 AGCD01023245;AGCD01023246;AGCD01023247;GBDF01221819;XM_005384740;XM_005384741;XM_005384742;XM_005384743 XP_005384797;XP_005384798;XP_005384799;XP_005384800 MODEL 8728018 protein-coding Fgf6 fibroblast growth factor 6 INVOLVED IN cartilage condensation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); myoblast differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); prostate carcinoma in situ (ortholog); FOUND IN sarcolemma (ortholog) NW_004955413 2246965 2257883 - 102030404 AGCD01013544;GBCB01049049;XM_005378730 XP_005378787 MODEL 9057901 protein-coding Slc30a9 solute carrier family 30 member 9 ENCODES a protein that exhibits chromatin binding (ortholog); nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of mitochondrion organization (ortholog); ASSOCIATED WITH bilirubin metabolic disorder (ortholog); Birk-Landau-Perez Syndrome (ortholog); cerebellar hypoplasia (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoskeleton (ortholog); endoplasmic reticulum (ortholog) NW_004955443 5641372 5716188 - 102009766 AGCD01038243;GBDF01187667;XM_005391923 XP_005391980 MODEL 8999857 protein-coding Clcn1 chloride voltage-gated channel 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); chloride transport (ortholog); muscle contraction (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN plasma membrane (ortholog); sarcolemma (ortholog) NW_004955494 318137 349568 - 102024581 AGCD01061376;GBCB01002166;XM_005405361 XP_005405418 MODEL 8766278 pseudo LOC102008146 DNA damage-regulated autophagy modulator protein 1 pseudogene NW_004955536 576531 579612 - 102008146 AGCD01070732 MODEL 9042336 protein-coding LOC102003022 tubulin alpha chain-like NW_004955483 457068 458303 + 102003022 AGCD01057616;XM_013503762 XP_013359216 MODEL 8861892 protein-coding Rbm5 RNA binding motif protein 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); spliceosomal complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955532 1929540 1957297 + 102024380 AGCD01070208;GBBH01063051;GBDF01081334;XM_013507632 XP_013363086 MODEL 8968751 pseudo LOC102008511 transmembrane protein 14A pseudogene NW_004955464 11151367 11152100 - 102008511 AGCD01050137;XR_263212 MODEL 8824622 pseudo LOC102009644 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955516 2584233 2584809 - 102009644 AGCD01067462 MODEL 8888167 pseudo LOC102013252 ataxin-1-like NW_004955456 14143590 14145611 + 102013252 AGCD01046634 MODEL 39133755 misc_rna 7SK 7SK RNA 8787750 protein-coding Trmt1l tRNA methyltransferase 1L ENCODES a protein that exhibits tRNA (guanine(27)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN adult behavior (ortholog); adult locomotory behavior (ortholog); tRNA N2-guanine methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955406 23735715 23772010 - 102008816 AGCD01006182;AGCD01006183;AGCD01006184;GBDF01007025;XM_005375072;XM_005375073;XM_013521695;XM_013521698 XP_005375129;XP_005375130;XP_013377149;XP_013377152 MODEL 39134345 misc_rna 7SK 7SK RNA 8946639 protein-coding Catsperz catsper channel auxiliary subunit zeta INVOLVED IN flagellated sperm motility (ortholog); male meiotic nuclear division (ortholog); sperm capacitation (ortholog); FOUND IN CatSper complex (ortholog); cytoplasm (ortholog); sperm midpiece (ortholog) NW_004955422 20777488 20780765 - 102021989 AGCD01023087;GBDI01145184;XM_013514234 XP_013369688 MODEL 8890888 protein-coding LOC102022332 uncharacterized LOC102022332 NW_004955442 5825456 5861268 - 102022332 AGCD01037570;AGCD01037571;GBBH01202596;XM_005391147;XM_013517640 XP_005391204;XP_013373094 MODEL 39134162 misc_rna 7SK 7SK RNA 8703767 protein-coding LOC102010843 kallikrein-2-like NW_004955559 416199 433647 - 102010843 AGCD01073584;AGCD01073585;AGCD01073586;GBDJ01062263;GBDJ01062266;XM_005412758 XP_005412815 MODEL 8990901 protein-coding Atp6v1e2 ATPase H+ transporting V1 subunit E2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955441 13432951 13458467 - 102013651 AGCD01037149;AGCD01037150;AGCD01037151;GBDF01047982;XM_005390982;XM_005390983;XM_013517587 XP_005391039;XP_005391040;XP_013373041 MODEL 9060975 protein-coding Plekha6 pleckstrin homology domain containing A6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 40066260 40200629 - 102020415 AGCD01006653;AGCD01006654;GBDK01395763;XM_005375292;XM_005375295;XM_005375306;XM_013522685;XM_013522688;XM_013522690;XM_013522693;XM_013522695;XM_013522700;XM_013522703;XM_013522704;XM_013522706;XM_013522707;XM_013522709;XM_013522711;XM_013522720;XM_013522725;XM_013522731;XM_013522738;XM_013522746;XM_013522750;XM_013522753;XM_013522759;XR_001237018 XP_005375349;XP_005375352;XP_005375363;XP_013378139;XP_013378142;XP_013378144;XP_013378147;XP_013378149;XP_013378154;XP_013378157;XP_013378158;XP_013378160;XP_013378161;XP_013378163;XP_013378165;XP_013378174;XP_013378179;XP_013378185;XP_013378192;XP_013378200;XP_013378204;XP_013378207;XP_013378213 MODEL 8753030 pseudo LOC102013636 S-phase kinase-associated protein 1 pseudogene NW_004955509 3838009 3838505 + 102013636 AGCD01066036 MODEL 10172450 ncrna LOC106150333 uncharacterized LOC106150333 NW_004955472 727679 740880 + 106150333 AGCD01053353;AGCD01053354;GBBH01226500;XR_001237078;XR_001237079;XR_001237080 MODEL 8878591 pseudo LOC102008880 10 kDa heat shock protein, mitochondrial pseudogene NW_004955512 3112785 3135884 - 102008880 AGCD01066696 MODEL 8769986 protein-coding CUNH8orf74 chromosome unknown C8orf74 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955403 52224529 52240276 + 102023548 AGCD01003003;GBDF01046056;XM_005373805 XP_005373862 MODEL 9018271 protein-coding Il12b interleukin 12B ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); ankylosing spondylitis (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955408 13302506 13316300 - 102021422 AGCD01008352;GBBH01220378;XM_005376251 XP_005376308 MODEL 8994994 pseudo LOC102012048 60S ribosomal protein L12-like NW_004955403 50676234 50697887 - 102012048 AGCD01002969 MODEL 8995761 protein-coding Epha6 EPH receptor A6 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog) NW_004955407 398415 1220542 - 102012926 AGCD01006740;AGCD01006741;AGCD01006742;AGCD01006743;AGCD01006744;AGCD01006745;AGCD01006746;AGCD01006747;AGCD01006748;AGCD01006749;AGCD01006750;AGCD01006751;AGCD01006752;AGCD01006753;AGCD01006754;AGCD01006755;AGCD01006756;AGCD01006757;AGCD01006758;AGCD01006759;AGCD01006760;AGCD01006761;AGCD01006762;AGCD01006763;AGCD01006764;AGCD01006765;AGCD01006766;AGCD01006767;AGCD01006768;AGCD01006769;AGCD01006770;AGCD01006771;AGCD01006772;AGCD01006773;AGCD01006774;AGCD01006775;AGCD01006776;AGCD01006777;AGCD01006778;AGCD01006779;AGCD01006780;AGCD01006781;AGCD01006782;AGCD01006783;AGCD01006784;AGCD01006785;AGCD01006786;GBCB01033975;XM_005375498;XM_005375499;XM_005375500;XM_013503527 XP_005375555;XP_005375556;XP_005375557;XP_013358981 MODEL 8737328 protein-coding Rptor regulatory associated protein of MTOR complex 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); enzyme-substrate adaptor activity (ortholog); protein kinase activator activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to L-leucine (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955506 2009422 2401775 - 102016498 AGCD01065287;AGCD01065288;AGCD01065289;AGCD01065290;AGCD01065291;AGCD01065292;AGCD01065293;AGCD01065294;GBCB01097652;XM_005407317;XM_005407318;XM_013506089 XP_005407374;XP_005407375;XP_013361543 MODEL 8873602 protein-coding LOC102007356 olfactory receptor 13G1-like NW_004955507 6477447 6478391 - 102007356 AGCD01065718;XM_005407724 XP_005407781 MODEL 8945454 protein-coding Wbp1 WW domain binding protein 1 ENCODES a protein that exhibits WW domain binding (ortholog) NW_004955424 11321393 11323651 - 102027420 AGCD01024562;GBCB01039025;XM_005385504;XM_005385505 XP_005385561;XP_005385562 MODEL 8740324 pseudo LOC102006984 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955458 70428 74229 + 102006984 AGCD01047106;XM_005397126 MODEL 8725136 protein-coding Ankrd34a ankyrin repeat domain 34A ASSOCIATED WITH Breast Neoplasms (ortholog); lymphoma (ortholog); FOUND IN cytosol (ortholog) NW_004955568 130062 134841 + 102029568 AGCD01074503;GBCB01063737;XM_005413420;XM_005413421 XP_005413477;XP_005413478 MODEL 8824098 protein-coding Blvra biliverdin reductase A ENCODES a protein that exhibits biliberdin reductase (NADH) activity (ortholog); biliverdin reductase (NADPH) activity (ortholog); biliverdin reductase [NAD(P)H] activity (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); canonical NF-kappaB signal transduction (ortholog); chemotaxis (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH cholestasis (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955460 129077 167345 - 102010875 AGCD01048335;AGCD01048336;AGCD01048337;GBDI01175001;XM_005397710 XP_005397767 MODEL 39131819 rrna 5S_rRNA 5S ribosomal RNA 8969917 ncrna LOC102004063 uncharacterized LOC102004063 NW_004955472 11452010 11467899 - 102004063 AGCD01053756;GBBH01126775;XR_001237068;XR_001237069;XR_263569;XR_263571 MODEL 8781812 protein-coding Apoc2 apolipoprotein C2 ENCODES a protein that exhibits identical protein binding (ortholog); lipase inhibitor activity (ortholog); lipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); chylomicron remnant clearance (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Coronary Disease (ortholog); diabetes mellitus (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); intermediate-density lipoprotein particle (ortholog) NW_004955555 2019547 2021543 + 102028689 AGCD01073125;GBCQ01062692;XM_005412482 XP_005412539 MODEL 8945055 ncrna LOC102004451 uncharacterized LOC102004451 NW_004955406 7310932 7332321 + 102004451 AGCD01005768;AGCD01005769;XR_001236295;XR_259483;XR_259484 MODEL 8744817 pseudo LOC102010056 protein FAM136A-like NW_004955416 11217210 11218822 - 102010056 AGCD01017181 MODEL 39134163 misc_rna 7SK 7SK RNA 8705696 protein-coding LOC102004828 olfactory receptor 2A12 NW_004955491 418194 419126 + 102004828 AGCD01060334;XM_005404724 XP_005404781 MODEL 8713191 protein-coding Prex2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); dendrite morphogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955444 11154318 11414680 - 102007377 AGCD01039035;AGCD01039036;AGCD01039037;AGCD01039038;AGCD01039039;AGCD01039040;AGCD01039041;GBCQ01125181;GBDK01093613;XM_005392120 XP_005392177 MODEL 9016293 protein-coding Cd2ap CD2 associated protein ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin filament polymerization (ortholog); adipose tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin filament (ortholog); anchoring junction (ortholog); axon (ortholog) NW_004955437 12005399 12087014 + 102021916 AGCD01034594;AGCD01034595;AGCD01034596;AGCD01034597;GBBH01026222;GBDF01156845;XM_013517016 XP_013372470 MODEL 8878375 protein-coding Dlgap5 DLG associated protein 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955409 8408040 8445587 + 102025879 AGCD01009407;AGCD01009408;AGCD01009409;AGCD01009410;AGCD01009411;GBDF01087616;XM_005376750;XM_013510318;XM_013510319 XP_005376807;XP_013365772;XP_013365773 MODEL 8986127 pseudo LOC102011642 ras-related protein Rab-5A pseudogene NW_004955468 5230636 5231184 + 102011642 AGCD01051959 MODEL 8811334 protein-coding LOC102013994 olfactory receptor 2L3-like NW_004955619 182473 183411 - 102013994 AGCD01077343;XM_005415006 XP_005415063 MODEL 9046707 protein-coding Btnl9 butyrophilin like 9 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955530 263915 284368 - 102011359 AGCD01069836;AGCD01069837;AGCD01069838;GBDI01324980;XM_005410120;XM_013507547 XP_005410177;XP_013363001 MODEL 8827360 ncrna LOC102018234 uncharacterized LOC102018234 NW_004955443 19101620 19119702 - 102018234 AGCD01038619;GBDF01262552;XR_262213 MODEL 8904162 protein-coding Snw1 SNW domain containing 1 ENCODES a protein that exhibits enzyme binding (ortholog); Notch binding (ortholog); nuclear androgen receptor binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); host-mediated activation of viral transcription (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); anemia (ortholog); Brain Injuries (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); cyclin/CDK positive transcription elongation factor complex (ortholog) NW_004955438 1561562 1601492 - 102019433 AGCD01034986;GBDF01008825;XM_005390214 XP_005390271 MODEL 8919122 protein-coding Adam28 ADAM metallopeptidase domain 28 ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); metallopeptidase activity (ortholog); ASSOCIATED WITH asbestos-related lung carcinoma (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955403 47304711 47409369 + 102020740 AGCD01002885;AGCD01002886;AGCD01002887;AGCD01002888;AGCD01002889;GBDF01020328;XM_005373705;XM_013514042;XM_013514049 XP_005373762;XP_013369496;XP_013369503 MODEL 8722476 protein-coding Acad11 acyl-CoA dehydrogenase family member 11 ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); kinase activity (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); fatty acid catabolic process (ortholog); FOUND IN mitochondrial membrane (ortholog); nucleus (ortholog); peroxisome (ortholog) NW_004955501 5871328 5952786 + 102006481 AGCD01064173;AGCD01064174;AGCD01064175;GBCE01176512;GBCE01176513;XM_005406834;XM_005406835 XP_005406891;XP_005406892 MODEL 8978301 protein-coding LOC102008154 fMet-Leu-Phe receptor NW_004955558 805352 810836 + 102008154 AGCD01073392;GBDK01070147;XM_005412671 XP_005412728 MODEL 8720387 protein-coding Fgf7 fibroblast growth factor 7 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); branching involved in salivary gland morphogenesis (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH cervical squamous cell carcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955409 4633542 4686768 - 102007739 AGCD01009294;AGCD01009295;GBDI01327012;XM_005376685;XM_005376686;XM_013510298 XP_005376742;XP_005376743;XP_013365752 MODEL 8941544 pseudo LOC102007357 transmembrane protein 168 pseudogene NW_004955511 1610996 1613016 + 102007357 AGCD01066376 MODEL 39133756 misc_rna 7SK 7SK RNA 8861078 protein-coding Cdk16 cyclin dependent kinase 16 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN exocytosis (ortholog); growth hormone secretion (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955516 860474 873338 - 102019309 AGCD01067404;GBBH01091108;XM_005408951;XM_005408954;XM_013506917;XM_013506918;XM_013506919;XM_013506920;XM_013506921;XM_013506922 XP_005409008;XP_005409011;XP_013362371;XP_013362372;XP_013362373;XP_013362374;XP_013362375;XP_013362376 MODEL 9008490 protein-coding Aldoc aldolase, fructose-bisphosphate C ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fructose-bisphosphate aldolase activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); epithelial cell differentiation (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); ASSOCIATED WITH autoimmune disease of the nervous system (ortholog); borna disease (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); postsynaptic cytosol (ortholog) NW_004955481 4576913 4580999 + 102030193 AGCD01056944;GBDI01055607;XM_005402747 XP_005402804 MODEL 8855936 pseudo LOC102005881 solute carrier family 35 member E3-like NW_004955451 2883147 2889213 - 102005881 AGCD01043026 MODEL 39131820 rrna 5S_rRNA 5S ribosomal RNA 8927884 pseudo LOC102004065 ribonuclease UK114-like NW_004955474 6358259 6358744 - 102004065 AGCD01054474 MODEL 8745142 protein-coding Cep78 centrosomal protein 78 INVOLVED IN acrosome assembly (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Cone-Rod Dystrophy and Hearing Loss (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955512 1184521 1222143 - 102025035 AGCD01066637;AGCD01066638;GBCC01035800;XM_005408298;XM_013506550 XP_005408355;XP_013362004 MODEL 9013716 protein-coding Slc31a1 solute carrier family 31 member 1 ENCODES a protein that exhibits copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to cisplatin (ortholog); copper ion import (ortholog); PARTICIPATES IN cisplatin drug pathway; cisplatin response pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Congenital Abnormalities (ortholog); Embryo Loss (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); early endosome membrane (ortholog) NW_004955419 14221258 14264288 - 102027189 AGCD01020015;GBDJ01239578;XM_005382690 XP_005382747 MODEL 8717195 ncrna LOC102008881 uncharacterized LOC102008881 NW_004955520 1038221 1056799 - 102008881 AGCD01068041;AGCD01068042;GBDF01278076;XR_264581 MODEL 8945258 protein-coding Clcn2 chloride voltage-gated channel 2 ENCODES a protein that exhibits chloride channel regulator activity (ortholog); voltage-gated chloride channel activity (ortholog); voltage-gated monoatomic anion channel activity (ortholog); INVOLVED IN cell differentiation involved in salivary gland development (ortholog); cellular hypotonic response (ortholog); chloride transport (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); bipolar disorder (ortholog); FOUND IN astrocyte end-foot (ortholog); axon initial segment (ortholog); basolateral plasma membrane (ortholog) NW_004955420 23138558 23152462 + 102019067 AGCD01021229;GBDF01160744;XM_005383315;XM_005383317;XM_005383319 XP_005383372;XP_005383374;XP_005383376 MODEL 8966444 protein-coding Plekha7 pleckstrin homology domain containing A7 ENCODES a protein that exhibits delta-catenin binding (ortholog); INVOLVED IN cell-cell adhesion mediated by cadherin (ortholog); epithelial cell-cell adhesion (ortholog); pore complex assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH angle-closure glaucoma (ortholog); Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); centrosome (ortholog) NW_004955414 31655391 31784009 - 102006236 AGCD01015759;AGCD01015760;GBCE01009822;XM_005380369;XM_013511964;XM_013511965;XM_013511966;XM_013511967 XP_005380426;XP_013367418;XP_013367419;XP_013367420;XP_013367421 MODEL 9056927 ncrna LOC102003024 uncharacterized LOC102003024 NW_004955419 21702352 21717956 + 102003024 AGCD01020282;GBDF01056389;XR_001233586;XR_001233587;XR_001233588;XR_001233589;XR_001233590;XR_001233591;XR_260649 MODEL 8731210 protein-coding Afg2b AAA ATPase AFG2B ENCODES a protein that exhibits identical protein binding (ortholog); preribosome binding (ortholog); INVOLVED IN DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); astigmatism (ortholog); autosomal recessive nonsyndromic deafness 119 (ortholog); FOUND IN ATPase complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955409 8031094 8049477 - 102025769 AGCD01009375;AGCD01009376;AGCD01009377;GBBH01209720;GBCQ01066797;XM_005377148 XP_005377205 MODEL 8995336 protein-coding Asph aspartate beta-hydroxylase ENCODES a protein that exhibits calcium ion binding (ortholog); peptidyl-aspartic acid 3-dioxygenase activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion transmembrane transport (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH Bile Duct Neoplasms (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955444 17116060 17320966 + 102027913 AGCD01039209;AGCD01039210;AGCD01039211;AGCD01039212;AGCD01039213;GBCB01088404;GBDI01074700;XM_013518174;XM_013518175 XP_013373628;XP_013373629 MODEL 8816539 pseudo LOC102009646 60S ribosomal protein L39 pseudogene NW_004955520 1114140 1114853 + 102009646 AGCD01068043;XM_005409228 MODEL 8776978 protein-coding LOC102008514 putative olfactory receptor 2B8 NW_004955465 13513122 13518306 - 102008514 AGCD01050613;GBDF01256300;XM_005398955;XM_013521794;XM_013521795 XP_005399012;XP_013377248;XP_013377249 MODEL 39132014 rrna 5S_rRNA 5S ribosomal RNA 8870865 protein-coding Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ENCODES a protein that exhibits beta-catenin binding (ortholog); protein phosphorylated amino acid binding (ortholog); ubiquitin ligase activator activity (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); mammary gland epithelial cell proliferation (ortholog); negative regulation of smoothened signaling pathway (ortholog); PARTICIPATES IN Hedgehog signaling pathway; nuclear factor kappa B signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955485 8724375 8846647 - 102026749 AGCD01058727;AGCD01058728;GBCB01021435;XM_005403874;XM_005403876;XM_005403877;XM_013504108;XM_013504109 XP_005403931;XP_005403933;XP_005403934;XP_013359562;XP_013359563 MODEL 8812616 protein-coding LOC102008157 vomeronasal type-2 receptor 116-like NW_004955563 100634 120790 - 102008157 AGCD01074043;AGCD01074044;AGCD01074045;AGCD01074046;GBDF01162776;XM_013509122 XP_013364576 MODEL 39134346 misc_rna 7SK 7SK RNA 9007174 protein-coding Ankrd34b ankyrin repeat domain 34B ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955418 29312312 29322572 + 102015011 AGCD01019457;XM_005382317;XM_013513049;XM_013513050 XP_005382374;XP_013368503;XP_013368504 MODEL 8915414 ncrna LOC102010844 uncharacterized LOC102010844 NW_004955443 5803759 5817261 + 102010844 AGCD01038244;GBBH01211346;XR_262178 MODEL 9046719 protein-coding Cav1 caveolin 1 ENCODES a protein that exhibits ATPase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiotensin-activated signaling pathway (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN insulin signaling pathway; platelet-derived growth factor signaling pathway; reverse cholesterol transport pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acanthosis nigricans (ortholog); acoustic neuroma (ortholog); FOUND IN acrosomal membrane (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955432 22258262 22292403 + 102011898 AGCD01031252;AGCD01031253;GBDI01017658;GBDK01011537;XM_005388120 XP_005388177 MODEL 8842683 protein-coding Trmt2a tRNA methyltransferase 2A ENCODES a protein that exhibits C-methyltransferase activity (ortholog); tRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955442 17993130 17997944 + 102023302 AGCD01037991;GBDF01088981;XM_005391731;XM_005391733 XP_005391788;XP_005391790 MODEL 39134040 misc_rna 7SK 7SK RNA 8710178 protein-coding Dlk1 delta like non-canonical Notch ligand 1 INVOLVED IN bone mineralization (ortholog); cell differentiation (ortholog); embryonic skeletal system development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; Notch signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH biliary atresia (ortholog); central precocious puberty (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cytoplasm (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955627 37886 43730 - 102024746 AGCD01077479;GBDF01049151;GBDK01224500;XM_005415026 XP_005415083 MODEL 8731635 pseudo LOC102018237 high mobility group protein B1-like NW_004955445 10890882 10892048 - 102018237 AGCD01039680 MODEL 8961285 ncrna LOC102013261 uncharacterized LOC102013261 NW_004955410 25529093 25547298 + 102013261 AGCD01011158;AGCD01011159;GBDJ01166591;XR_001232700;XR_259865 MODEL 8740331 ncrna LOC102006991 uncharacterized LOC102006991 NW_004955463 9497759 9499164 + 102006991 AGCD01049785;XR_263164 MODEL 8717665 protein-coding Wbp11 WW domain binding protein 11 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); WW domain binding (ortholog); INVOLVED IN RNA splicing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); bicuspid aortic valve disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955413 11533303 11549067 - 102028846 AGCD01013964;GBCQ01067517;XM_005379004;XM_005379005;XM_013511645 XP_005379061;XP_005379062;XP_013367099 MODEL 9004013 protein-coding Fgf8 fibroblast growth factor 8 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955485 8517412 8521732 + 102017343 AGCD01058719;GBDF01030332;XM_005403931 XP_005403988 MODEL 9015783 protein-coding Sez6 seizure related 6 homolog INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Childhood Schizophrenia (ortholog); esophageal cancer (ortholog); FOUND IN apical dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) NW_004955481 4175637 4220809 + 102017336 AGCD01056932;GBBH01109329;XM_005402699;XM_005402700;XM_005402701;XM_005402702;XM_013503418 XP_005402756;XP_005402757;XP_005402758;XP_005402759;XP_013358872 MODEL 8865245 protein-coding LOC102022333 olfactory receptor 4K2-like NW_004955550 537881 538840 - 102022333 AGCD01072509;XM_005412133 XP_005412190 MODEL 8862013 pseudo LOC102004452 60S ribosomal protein L31 pseudogene NW_004955453 3310962 3311426 + 102004452 AGCD01044654;XM_005395701 MODEL 39131821 rrna 5S_rRNA 5S ribosomal RNA 9021859 protein-coding LOC102004831 olfactory receptor 4B1-like NW_004955422 329742 330700 + 102004831 AGCD01022404;XM_005384935 XP_005384992 MODEL 8737038 protein-coding CUNH8orf76 chromosome unknown C8orf76 homolog NW_004955540 2097912 2115921 - 102028896 AGCD01071312;AGCD01071313;AGCD01071314;GBDF01157584;XM_005410922;XM_005410923 XP_005410979;XP_005410980 MODEL 9037534 protein-coding LOC102010058 galectin-5-like NW_004955481 5603002 5609837 - 102010058 AGCD01056998;GBDI01345788;XM_005402926 XP_005402983 MODEL 8838953 protein-coding Prf1 perforin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN circadian rhythm (ortholog); defense response to tumor cell (ortholog); defense response to virus (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasmic vesicle (ortholog); endosome lumen (ortholog) NW_004955437 20700912 20705076 + 102011908 AGCD01034879;AGCD01034880;GBDK01182633;XM_005390052 XP_005390109 MODEL 9021224 protein-coding Cd2bp2 CD2 cytoplasmic tail binding protein 2 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); INVOLVED IN spliceosomal tri-snRNP complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955493 7281073 7283879 - 102011878 AGCD01061175;GBCQ01036195;XM_005405248;XM_005405249 XP_005405305;XP_005405306 MODEL 8976262 protein-coding Plekha8 pleckstrin homology domain containing A8 ENCODES a protein that exhibits ceramide binding (ortholog); cerebroside transfer activity (ortholog); glycolipid binding (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); globoside biosynthetic process (ortholog); glycolipid transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cis-Golgi network membrane (ortholog); nucleoplasm (ortholog); trans-Golgi network (ortholog) NW_004955410 31327015 31386671 + 102017751 AGCD01011321;AGCD01011322;AGCD01011323;GBDF01087012;XM_005377490;XM_013510617 XP_005377547;XP_013366071 MODEL 8761390 protein-coding LOC102011647 olfactory receptor 52B2-like NW_004955414 21925278 21926526 - 102011647 AGCD01015437;XM_013511699 XP_013367153 MODEL 8848182 protein-coding Il12rb1 interleukin 12 receptor subunit beta 1 ENCODES a protein that exhibits coreceptor activity (ortholog); cytokine binding (ortholog); interleukin-12 receptor activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); interleukin-12-mediated signaling pathway (ortholog); interleukin-23-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); asthma (ortholog); FOUND IN external side of plasma membrane (ortholog); interleukin-12 receptor complex (ortholog); interleukin-23 receptor complex (ortholog) NW_004955524 3276932 3299617 + 102011474 AGCD01068876;AGCD01068877;AGCD01068878;AGCD01068879;GBBH01019037;GBDF01252409;XM_013507268 XP_013362722 MODEL 8764806 protein-coding LOC102004074 uncharacterized LOC102004074 NW_004955420 23886315 23891242 - 102004074 AGCD01021263;AGCD01021264;GBDF01041126;XM_005383365;XM_013513352;XR_001233671;XR_001233672 XP_005383422;XP_013368806 MODEL 9045456 protein-coding Rbm6 RNA binding motif protein 6 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955532 1811794 1914551 + 102023074 AGCD01070200;AGCD01070201;AGCD01070202;AGCD01070203;AGCD01070204;AGCD01070205;GBDF01050658;XM_005410236;XM_013507616;XM_013507617 XP_005410293;XP_013363070;XP_013363071 MODEL 8791845 protein-coding Epha7 EPH receptor A7 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); chemorepellent activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN brain development (ortholog); branching morphogenesis of a nerve (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955411 19652146 19815418 - 102012295 AGCD01012039;AGCD01012040;AGCD01012041;AGCD01012042;GBCQ01095584;XM_005377770;XM_005377771;XM_005377772;XM_005377773 XP_005377827;XP_005377828;XP_005377829;XP_005377830 MODEL 8951663 protein-coding Snx1 sorting nexin 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endosomal transport (ortholog); endosome membrane tubulation (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); early endosome (ortholog) NW_004955450 11266712 11306014 - 102020402 AGCD01042653;GBDK01008578;XM_005393766;XM_013518974;XM_013518975;XM_013518976;XM_013518977;XM_013518978;XM_013518979 XP_005393823;XP_013374428;XP_013374429;XP_013374430;XP_013374431;XP_013374432;XP_013374433 MODEL 8738533 protein-coding Blvrb biliverdin reductase B ENCODES a protein that exhibits biliverdin reductase [NAD(P)H] activity (ortholog); FMN reductase (NADH) activity (ortholog); FMN reductase (NADPH) activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone marrow development (ortholog); cell fate specification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN terminal bouton; cytoplasm (ortholog); cytosol (ortholog) NW_004955578 813834 834675 + 102012040 AGCD01075498;GBCE01001251;XM_005414044 XP_005414101 MODEL 8836636 protein-coding Acad8 acyl-CoA dehydrogenase family member 8 ENCODES a protein that exhibits short-chain 2-methyl fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955412 35067637 35083889 + 102030402 AGCD01013397;AGCD01013398;AGCD01013399;GBCQ01063988;XM_005378593;XM_005378594;XM_005378595 XP_005378650;XP_005378651;XP_005378652 MODEL 8762067 protein-coding Trmt44 tRNA methyltransferase 44 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955514 2618671 2636822 - 102008970 AGCD01067085;GBBH01206510;XM_005408776 XP_005408833 MODEL 8785922 protein-coding Adam29 ADAM metallopeptidase domain 29 INVOLVED IN energy homeostasis (ortholog); gene expression (ortholog); respiratory system process (ortholog); ASSOCIATED WITH high grade glioma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN external side of plasma membrane (ortholog); sperm head plasma membrane (ortholog) NW_004955403 32233940 32257782 - 102020404 AGCD01002432;AGCD01002433;GBDF01002252;XM_005373528;XM_005373529;XM_013515226;XM_013515229 XP_005373585;XP_005373586;XP_013370680;XP_013370683 MODEL 8889785 protein-coding Afg3l2 AFG3 like matrix AAA peptidase subunit 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN axonogenesis (ortholog); calcium import into the mitochondrion (ortholog); cellular response to glutathione (ortholog); ASSOCIATED WITH Apnea (ortholog); Arthralgia (ortholog); atrial heart septal defect (ortholog); FOUND IN m-AAA complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955402 1037414 1069165 + 102012484 AGCD01000045;AGCD01000046;GBCE01137899;GBDF01126909;XM_013513870;XM_013513903 XP_013369324;XP_013369357 MODEL 39133757 misc_rna 7SK 7SK RNA 8707787 pseudo LOC102007358 olfactory receptor 5W2-like NW_004955511 700104 706604 - 102007358 AGCD01066338;AGCD01066339;XM_005408208 MODEL 39134164 misc_rna 7SK 7SK RNA 8843898 protein-coding LOC102013638 chromosome unknown open reading frame, human C10orf113 NW_004955429 7379866 7403057 + 102013638 AGCD01028592;AGCD01028593;GBDK01367199;XM_005387236 XP_005387293 MODEL 8954322 protein-coding Bub1 BUB1 mitotic checkpoint serine/threonine kinase ENCODES a protein that exhibits histone H2A kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) NW_004955470 3152798 3190185 + 102007217 AGCD01052692;AGCD01052693;GBDF01156049;XM_005400628 XP_005400685 MODEL 8941527 ncrna LOC102005882 uncharacterized LOC102005882 NW_004955452 2251854 2256006 - 102005882 AGCD01043886;XR_262636 MODEL 9045231 pseudo LOC102012050 protein regulator of cytokinesis 1-like NW_004955451 11417605 11442353 + 102012050 AGCD01043354 MODEL 8745840 protein-coding Alg1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase ENCODES a protein that exhibits chitobiosyldiphosphodolichol beta-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); aphasia (ortholog) NW_004955442 12476055 12487613 - 102026266 AGCD01037736;GBDI01223383;XM_005391248;XM_005391249 XP_005391305;XP_005391306 MODEL 8730562 protein-coding Cep83 centrosomal protein 83 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); establishment of centrosome localization (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ciliopathy (ortholog); FOUND IN centriole (ortholog); ciliary transition fiber (ortholog); Golgi apparatus (ortholog) NW_004955405 31024524 31165824 - 102029472 AGCD01005280;AGCD01005281;AGCD01005282;GBBH01163359;XM_005374473;XM_005374474;XM_013518399;XM_013518406 XP_005374530;XP_005374531;XP_013373853;XP_013373860 MODEL 39134041 misc_rna 7SK 7SK RNA 8897789 pseudo LOC102003025 splicing factor 3A subunit 1-like NW_004955419 15519929 15520421 + 102003025 AGCD01020083 MODEL 8871156 protein-coding Asphd1 aspartate beta-hydroxylase domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); spondylocostal dysostosis 5 (ortholog) NW_004955493 7055944 7076802 - 102005944 AGCD01061154;GBDI01165003;XM_005405229;XM_005405230;XM_013504791;XM_013504792;XM_013504793;XM_013504794;XM_013504795;XM_013504796;XM_013504797 XP_005405286;XP_005405287;XP_013360245;XP_013360246;XP_013360247;XP_013360248;XP_013360249;XP_013360250;XP_013360251 MODEL 8966735 protein-coding Plekhb1 pleckstrin homology domain containing B1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN regulation of cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955414 17826812 17840988 - 102014039 AGCD01015256;GBDI01000683;XM_005379942;XM_005379943;XM_005379944;XM_005379945;XM_005379946;XM_005379947 XP_005379999;XP_005380000;XP_005380001;XP_005380002;XP_005380003;XP_005380004 MODEL 9033798 ncrna LOC102009650 uncharacterized LOC102009650 NW_004955537 1976715 1992245 - 102009650 AGCD01070909;GBDJ01200201;XR_001232066;XR_001232067;XR_001232068;XR_264772 MODEL 8718409 ncrna LOC102008515 uncharacterized LOC102008515 NW_004955412 14935574 14945274 - 102008515 AGCD01012863;GBCQ01079249;XR_259995 MODEL 39132015 rrna 5S_rRNA 5S ribosomal RNA 8833558 protein-coding Atp6v1f ATPase H+ transporting V1 subunit F ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) NW_004955479 9664574 9667667 + 102005708 AGCD01056485;AGCD01056486;GBCB01001485;XM_005402399 XP_005402456 MODEL 39134347 misc_rna 7SK 7SK RNA 8718567 protein-coding Ankrd34c ankyrin repeat domain 34C ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955533 311863 320185 + 102014083 AGCD01070314;XM_005410382;XM_005410383 XP_005410439;XP_005410440 MODEL 8931662 protein-coding Adam32 ADAM metallopeptidase domain 32 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); sperm principal piece (ortholog) NW_004955536 3352117 3482742 - 102020484 AGCD01070820;AGCD01070821;AGCD01070822;AGCD01070823;AGCD01070824;GBDF01043201;XM_013507724 XP_013363178 MODEL 8719330 protein-coding LOC102013995 disintegrin and metalloproteinase domain-containing protein 21 NW_004955656 37920 44620 - 102013995 AGCD01077846;GBDF01082523;XM_005415059 XP_005415116 MODEL 8765745 pseudo LOC102013640 S-formylglutathione hydrolase pseudogene NW_004955431 13529546 13530392 + 102013640 AGCD01030308 MODEL 8856862 protein-coding LOC102010846 olfactory receptor 2W1-like NW_004955576 1239098 1240057 - 102010846 AGCD01075364;XM_005413951 XP_005414008 MODEL 8741484 ncrna LOC102008892 uncharacterized LOC102008892 NW_004955439 2679785 2686659 - 102008892 AGCD01035657;GBDF01185074;XR_261968 MODEL 8781916 ncrna LOC102004832 uncharacterized LOC102004832 NW_004955495 4237269 4239443 - 102004832 AGCD01061905;XR_264150 MODEL 8929461 protein-coding Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN metaphase/anaphase transition of mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); protein localization to chromosome, centromeric region (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955416 7105302 7159121 + 102015008 AGCD01016963;AGCD01016964;AGCD01016965;AGCD01016966;GBDF01053678;XM_005381216;XM_005381217;XM_005381218;XM_013512666;XM_013512667 XP_005381273;XP_005381274;XP_005381275;XP_013368120;XP_013368121 MODEL 8990178 ncrna LOC102018240 uncharacterized LOC102018240 NW_004955447 18427382 18430221 + 102018240 AGCD01041172;GBDF01114538;XR_262446 MODEL 9066185 protein-coding Dlk2 delta like non-canonical Notch ligand 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955437 9297557 9302581 - 102007813 AGCD01034524;AGCD01034525;GBCC01001936;XM_005389766;XM_005389767;XM_013516814;XM_013516815 XP_005389823;XP_005389824;XP_013372268;XP_013372269 MODEL 8882064 ncrna LOC102013262 uncharacterized LOC102013262 NW_004955462 13861908 13874784 + 102013262 AGCD01049434;GBDF01307845;XR_001236609 MODEL 8858533 protein-coding Cdk17 cyclin dependent kinase 17 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955405 32565193 32608388 - 102008814 AGCD01005334;GBDF01190095;GBDF01190097;XM_013518508 XP_013373962 MODEL 8812794 protein-coding Blzf1 basic leucine zipper nuclear factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); nucleoplasm (ortholog) NW_004955462 7856650 7879659 - 102015699 AGCD01049309;GBDI01293361;XM_005398201;XM_005398202;XM_013521407;XM_013521408;XM_013521409 XP_005398258;XP_005398259;XP_013376861;XP_013376862;XP_013376863 MODEL 8798443 protein-coding Epha8 EPH receptor A8 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN early endosome membrane (ortholog); neuron projection (ortholog); plasma membrane (ortholog) NW_004955452 2702277 2729161 + 102012603 AGCD01043903;GBDF01242136;XM_013519449;XR_001236014 XP_013374903 MODEL 8826170 protein-coding LOC102022334 zinc finger protein 227 NW_004955555 1633022 1640505 + 102022334 AGCD01073093;AGCD01073094;AGCD01073095;GBDF01014099;GBDJ01402956;XM_005412461 XP_005412518 MODEL 8914164 protein-coding Trmt5 tRNA methyltransferase 5 INVOLVED IN mitochondrial tRNA methylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 26 (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955466 8679795 8690203 + 102014123 AGCD01050997;GBBH01052220;XM_005399167;XM_013521928;XM_013521929;XM_013521930;XM_013521931 XP_005399224;XP_013377382;XP_013377383;XP_013377384;XP_013377385 MODEL 8775268 protein-coding Fgf9 fibroblast growth factor 9 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell signaling (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog) NW_004955497 2199424 2232088 + 102015123 AGCD01062498;AGCD01062499;GBCQ01178042;XM_005406315 XP_005406372 MODEL 8830439 protein-coding Clcn3 Cl-/H+ antiporter 3 ENCODES a protein that exhibits antiporter activity (ortholog); chloride channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); anxiety disorder (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); cytoplasmic vesicle (ortholog) NW_004955403 36625871 36710201 - 102002982 AGCD01002544;AGCD01002545;AGCD01002546;GBCC01015450;XM_005373554;XM_005373555;XM_005373556;XM_005373557;XM_005373558;XM_005373559;XM_005373560;XM_005373561;XM_005373562 XP_005373611;XP_005373612;XP_005373613;XP_005373614;XP_005373615;XP_005373616;XP_005373617;XP_005373618;XP_005373619 MODEL 39133758 misc_rna 7SK 7SK RNA 9033649 protein-coding Cav2 caveolin 2 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); heterotrimeric G-protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN basement membrane organization (ortholog); caveola assembly (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; syndecan signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Autoimmune Myocarditis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); caveola (ortholog); caveolar macromolecular signaling complex (ortholog) NW_004955432 22240041 22242200 + 102005623 AGCD01031251;GBDK01002096;GBDK01002097;XM_005388157 XP_005388214 MODEL 9007007 pseudo LOC102007361 uncharacterized LOC102007361 NW_004955515 1742608 1754797 - 102007361 AGCD01067234;AGCD01067235 MODEL 9021064 protein-coding Slc31a2 solute carrier family 31 member 2 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); transporter regulator activity (ortholog); INVOLVED IN copper ion import (ortholog); copper ion transmembrane transport (ortholog); copper ion transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955419 14332749 14343363 - 102027749 AGCD01020016;GBCQ01036886;XM_005382692 XP_005382749 MODEL 8710588 protein-coding Sez6l seizure related 6 homolog like INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); synapse maturation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955455 816129 992776 + 102013250 AGCD01045565;AGCD01045566;AGCD01045567;GBDF01112713;XM_005396140;XM_013520286 XP_005396197;XP_013375740 MODEL 8782666 ncrna LOC102005885 uncharacterized LOC102005885 NW_004955405 12185694 12195667 + 102005885 AGCD01004849;GBDF01147002;XR_259373 MODEL 8929995 protein-coding LOC102010059 olfactory receptor 2M5-like NW_004955418 30041497 30084803 - 102010059 AGCD01019499;AGCD01019500;AGCD01019501;AGCD01019502;AGCD01019503;XM_013512879 XP_013368333 MODEL 8867241 ncrna LOC102012054 uncharacterized LOC102012054 NW_004955405 38958635 38968152 + 102012054 AGCD01005493;GBDK01428567;XR_259444 MODEL 9040354 protein-coding Prg4 proteoglycan 4 INVOLVED IN hematopoietic stem cell proliferation (ortholog); negative regulation of interleukin-6 production (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); camptodactyly-arthropathy-coxa vara-pericarditis syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 24726483 24742590 + 102012278 AGCD01006207;GBDK01315861;XM_005375084;XM_005375085;XM_005375086;XM_005375087;XM_013521767 XP_005375141;XP_005375142;XP_005375143;XP_005375144;XP_013377221 MODEL 8957220 protein-coding Cd300a CD300a molecule ENCODES a protein that exhibits phosphatase binding (ortholog); phosphatidylethanolamine binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of B cell proliferation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955553 1335854 1356001 + 102009111 AGCD01072878;AGCD01072879;GBDK01277573;XM_005412236;XM_013508663 XP_005412293;XP_013364117 MODEL 8937573 protein-coding Rbm7 RNA binding motif protein 7 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); pre-mRNA intronic binding (ortholog); RNA binding (ortholog); INVOLVED IN snRNA catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung non-small cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear exosome targeting complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955412 15996206 16004177 + 102012747 AGCD01012888;GBDF01082376;XM_005378157;XM_005378158 XP_005378214;XP_005378215 MODEL 9011464 protein-coding Snx10 sorting nexin 10 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); ATPase binding (ortholog); INVOLVED IN bone mineralization involved in bone maturation (ortholog); bone remodeling (ortholog); bone resorption (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive osteopetrosis 8 (ortholog); cervical cancer (ortholog); FOUND IN apical cytoplasm (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955410 28137426 28178814 + 102025219 AGCD01011242;AGCD01011243;AGCD01011244;GBBH01006766;GBCQ01123481;XM_013510607 XP_013366061 MODEL 8801468 protein-coding Apoc3 apolipoprotein C3 ENCODES a protein that exhibits high-density lipoprotein particle receptor binding (ortholog); lipase inhibitor activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH apolipoprotein C-III deficiency (ortholog); breast cancer (ortholog); cardiovascular system disease (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); intermediate-density lipoprotein particle (ortholog) NW_004955412 18165667 18168015 + 102021864 AGCD01012927;GBCQ01006025;XM_005378187 XP_005378244 MODEL 8825629 protein-coding LOC102008160 zinc finger protein 709-like NW_004955569 1635173 1644301 + 102008160 AGCD01074673;GBDF01011195;XM_005413505 XP_005413562 MODEL 8745866 protein-coding Bub3 BUB3 mitotic checkpoint protein INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); protein localization to kinetochore (ortholog); regulation of chromosome segregation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN kinetochore (ortholog); mitotic checkpoint complex (ortholog); nucleoplasm (ortholog) NW_004955477 1305937 1319330 + 102026634 AGCD01055504;GBDF01043135;XM_005401960;XM_005401961 XP_005402017;XP_005402018 MODEL 8818709 protein-coding Acad9 acyl-CoA dehydrogenase family member 9 ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); medium-chain fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN long-chain fatty acid metabolic process (ortholog); medium-chain fatty acid metabolic process (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog); cervical cancer (ortholog); FOUND IN dendrite (ortholog); mitochondrial complex I intermediate assembly complex (ortholog); mitochondrial membrane (ortholog) NW_004955450 10576615 10603779 - 102013463 AGCD01042627;GBDJ01180620;XM_005393740;XM_013518917 XP_005393797;XP_013374371 MODEL 10317837 protein-coding LOC106150334 uncharacterized LOC106150334 NW_004955472 909845 924601 - 106150334 AGCD01053365;GBDI01187571;XM_013522968 XP_013378422 MODEL 39134165 misc_rna 7SK 7SK RNA 39131823 rrna 5S_rRNA 5S ribosomal RNA 8927994 protein-coding Wbp1l WW domain binding protein 1 like ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); hemopoiesis (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH nevoid basal cell carcinoma syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955485 7655921 7710387 - 102011546 AGCD01058669;AGCD01058670;AGCD01058671;AGCD01058672;GBCE01054786;XM_005403823;XM_005403824;XM_013504076;XM_013504077 XP_005403880;XP_005403881;XP_013359530;XP_013359531 MODEL 8746033 protein-coding LOC102004077 protein transport protein Sec61 subunit beta-like NW_004955491 6427300 6427659 + 102004077 AGCD01060529;XM_013504569 XP_013360023 MODEL 8748300 protein-coding Il12rb2 interleukin 12 receptor subunit beta 2 ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-12 receptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to interleukin-12 (ortholog); interleukin-12-mediated signaling pathway (ortholog); positive regulation of natural killer cell proliferation (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN external side of plasma membrane (ortholog); interleukin-12 receptor complex (ortholog) NW_004955423 23774557 23806744 - 102015967 AGCD01024017;AGCD01024018;GBBH01120818;GBDF01250178;XM_013514509 XP_013369963 MODEL 8979167 pseudo LOC102008893 60S ribosomal protein L17 pseudogene NW_004955439 18545099 18545654 + 102008893 AGCD01036056 MODEL 8897634 protein-coding Adam33 ADAM metallopeptidase domain 33 ASSOCIATED WITH asthma (ortholog); Breast Neoplasms (ortholog); Bronchial Hyperreactivity (ortholog) NW_004955415 14523517 14535701 - 102028291 AGCD01016300;GBCE01003714;XM_013512128 XP_013367582 MODEL 8702256 pseudo LOC102006994 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955412 10686073 10686348 + 102006994 AGCD01012776 MODEL 8910156 protein-coding LOC102003026 uncharacterized LOC102003026 NW_004955485 9190059 9193837 + 102003026 AGCD01058751;AGCD01058752;GBDF01251522;XM_013504053 XP_013359507 MODEL 39134042 misc_rna 7SK 7SK RNA 8898335 protein-coding CUNH8orf82 chromosome unknown C8orf82 homolog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955454 3150021 3153602 - 102015601 AGCD01045057;GBCB01059809;XM_005395922;XR_001236225;XR_001236226 XP_005395979 MODEL 8866413 protein-coding Asphd2 aspartate beta-hydroxylase domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955455 1030962 1039129 + 102013797 AGCD01045568;GBDF01220555;GBDF01220556;XM_013520382 XP_013375836 MODEL 9062926 pseudo LOC102009651 synaptonemal complex protein 3-like NW_004955437 1319326 1320146 - 102009651 AGCD01034204 MODEL 8724624 protein-coding LOC102008516 epididymal secretory glutathione peroxidase NW_004955465 13787944 13795076 + 102008516 AGCD01050624;AGCD01050625;XM_005399016 XP_005399073 MODEL 8931135 protein-coding LOC102011649 NADH-cytochrome b5 reductase 2 ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955414 23421387 23427883 - 102011649 AGCD01015497;GBCE01040815;GBDJ01193166;XM_013511703 XP_013367157 MODEL 8738091 protein-coding Atp6v1g1 ATPase H+ transporting V1 subunit G1 ENCODES a protein that exhibits ATPase binding (ortholog); proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH pancreatic adenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955419 13047755 13056113 - 102009948 AGCD01019995;GBDF01008199;XM_005382627 XP_005382684 MODEL 9032403 protein-coding Rpusd1 RNA pseudouridine synthase domain containing 1 ENCODES a protein that exhibits tRNA pseudouridine synthase activity (ortholog); INVOLVED IN tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog); sarcoma (ortholog) NW_004955442 16423526 16426623 + 102014183 AGCD01037900;GBBH01006331;XM_005391598;XM_005391599 XP_005391655;XP_005391656 MODEL 9026781 protein-coding LOC102004456 keratin-associated protein 20-2-like NW_004955407 30031156 30031311 - 102004456 AGCD01007623;XM_005375633 XP_005375690 MODEL 39134348 misc_rna 7SK 7SK RNA 9059896 protein-coding Ankrd35 ankyrin repeat domain 35 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955568 204422 222065 + 102004529 AGCD01074506;GBDF01010622;XM_005413430;XM_005413431;XM_005413432;XM_005413433 XP_005413487;XP_005413488;XP_005413489;XP_005413490 MODEL 8853598 ncrna LOC102013996 uncharacterized LOC102013996 NW_004955403 28302700 28402563 - 102013996 AGCD01002336;GBCQ01089640;XR_001233584;XR_259210 MODEL 9063061 pseudo LOC102013641 protein yippee-like 5 NW_004955431 4838789 4839154 + 102013641 AGCD01030014 MODEL 8750588 protein-coding Cep85 centrosomal protein 85 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); centriole assembly (ortholog); centriole replication (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cell cortex (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955452 5649069 5682264 + 102014856 AGCD01044051;GBDF01002990;XM_005394849;XM_005394850 XP_005394906;XP_005394907 MODEL 8806386 protein-coding LOC102004834 uncharacterized LOC102004834 NW_004955426 391229 395014 + 102004834 AGCD01026001;GBDF01177168;XM_005386119;XM_005386120;XR_001234323 XP_005386176;XP_005386177 MODEL 8933930 ncrna LOC102004078 uncharacterized LOC102004078 NW_004955422 13779712 13782349 - 102004078 AGCD01022838;GBDI01019729;XR_260873 MODEL 8719435 protein-coding LOC102018242 vomeronasal type-2 receptor 1-like NW_004955448 7059300 7085760 + 102018242 AGCD01041399;AGCD01041400;XM_005393075 XP_005393132 MODEL 8853213 protein-coding Prickle1 prickle planar cell polarity protein 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription factor binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior visceral endoderm cell migration (ortholog); aorta development (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); autism spectrum disorder (ortholog); autosomal recessive Robinow syndrome (ortholog); FOUND IN cell trailing edge (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955500 1897899 1990791 - 102003891 AGCD01063688;AGCD01063689;AGCD01063690;AGCD01063691;GBDI01107945;XM_005406578;XM_013505663;XM_013505664 XP_005406635;XP_013361117;XP_013361118 MODEL 8833132 ncrna LOC102013263 uncharacterized LOC102013263 NW_004955410 30910864 30939783 - 102013263 AGCD01011313;GBDJ01050962;XR_259888 MODEL 39132016 rrna 5S_rRNA 5S ribosomal RNA 9003132 protein-coding Adam7 ADAM metallopeptidase domain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN epididymis development (ortholog); epithelial cell morphogenesis (ortholog); positive regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH infertility (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955403 47465916 47521251 + 102017186 AGCD01002890;XM_005373907 XP_005373964 MODEL 8715403 protein-coding Cdk18 cyclin dependent kinase 18 INVOLVED IN positive regulation of myelination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 41228802 41256413 + 102009249 AGCD01006674;AGCD01006675;GBBH01188253;XM_005375359 XP_005375416 MODEL 8979899 protein-coding CUNH8orf88 chromosome unknown C8orf88 homolog NW_004955417 7738254 7758867 - 102012962 AGCD01018014;GBDF01002053;XM_005381767;XM_013512853 XP_005381824;XP_013368307 MODEL 8951046 pseudo LOC102022339 RING-box protein 2 pseudogene NW_004955563 1440099 1440434 - 102022339 AGCD01074147 MODEL 8740501 protein-coding Bmal1 basic helix-loop-helix ARNT like 1 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); bHLH transcription factor binding (ortholog); DNA binding (ortholog); INVOLVED IN autophagy (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN chromatoid body (ortholog); CLOCK-BMAL transcription complex (ortholog); cytoplasm (ortholog) NW_004955414 28652663 28748360 + 102018716 AGCD01015682;AGCD01015683;AGCD01015684;AGCD01015685;GBDF01194319;XM_005380316;XM_005380317;XM_005380319;XM_005380321;XM_013511990;XM_013511991 XP_005380373;XP_005380374;XP_005380376;XP_005380378;XP_013367444;XP_013367445 MODEL 8815151 protein-coding Trmt6 tRNA methyltransferase 6 non-catalytic subunit INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); tRNA (m1A) methyltransferase complex (ortholog) NW_004955415 16333766 16390112 - 102016916 AGCD01016376;AGCD01016377;AGCD01016378;AGCD01016379;GBCQ01122321;XM_005380851;XM_005380852;XM_013512262 XP_005380908;XP_005380909;XP_013367716 MODEL 39133759 misc_rna 7SK 7SK RNA 39131824 rrna 5S_rRNA 5S ribosomal RNA 8779865 pseudo LOC102007362 ATM interactor pseudogene NW_004955516 35910 38266 + 102007362 AGCD01067367 MODEL 8928785 protein-coding Ephb1 EPH receptor B1 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); protein tyrosine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); camera-type eye morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH aortic dissection (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) NW_004955501 3424112 3821727 - 102020266 AGCD01064105;AGCD01064106;GBDF01113237;XM_005406784 XP_005406841 MODEL 9064143 protein-coding Cav3 caveolin 3 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium channel regulator activity (ortholog); connexin binding (ortholog); INVOLVED IN actin filament organization (ortholog); cardiac muscle cell development (ortholog); caveola assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dystrophin-associated glycoprotein complex (ortholog) NW_004955561 326008 335911 + 102027240 AGCD01073821;GBCB01040641;XM_005412999 XP_005413056 MODEL 8791245 protein-coding Dll1 delta like canonical Notch ligand 1 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN astrocyte development (ortholog); cell-cell signaling (ortholog); cerebellar molecular layer formation (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955411 3478943 3486541 + 102017105 AGCD01011552;GBDK01317392;XM_005377625 XP_005377682 MODEL 8918912 protein-coding Slc32a1 solute carrier family 32 member 1 ENCODES a protein that exhibits gamma-aminobutyric acid transmembrane transporter activity (ortholog); gamma-aminobutyric acid:proton antiporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); angiogenesis (ortholog); beta-alanine transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 114 (ortholog); FOUND IN cell surface (ortholog); cell tip (ortholog); cone cell pedicle (ortholog) NW_004955445 18033128 18038002 - 102009772 AGCD01039898;XM_005392531 XP_005392588 MODEL 9007013 pseudo LOC102010065 plasminogen activator inhibitor 1 RNA-binding protein pseudogene NW_004955424 3444768 3446184 - 102010065 AGCD01024310;XR_261038 MODEL 8914120 protein-coding LOC102012056 basic proline-rich protein-like NW_004955406 37370333 37389779 + 102012056 AGCD01006576;GBDF01003978;XM_005375168;XR_001236862 XP_005375225 MODEL 9043099 protein-coding Wbp2 WW domain binding protein 2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); nuclear estrogen receptor binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); establishment of protein localization to chromatin (ortholog); positive regulation of intracellular estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 107 (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955506 6398411 6406970 + 102011685 AGCD01065420;GBDF01010035;XM_005407477;XM_013506054 XP_005407534;XP_013361508 MODEL 8891322 protein-coding Snx11 sorting nexin 11 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); INVOLVED IN vesicle organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); plasma membrane (ortholog) NW_004955451 13051649 13060479 - 102008910 AGCD01043444;GBCE01136669;XM_005394248;XM_013519425;XM_013519426;XM_013519427 XP_005394305;XP_013374879;XP_013374880;XP_013374881 MODEL 8823225 protein-coding Afmid arylformamidase ENCODES a protein that exhibits arylformamidase activity (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955506 4351623 4379528 - 102009634 AGCD01065333;AGCD01065334;AGCD01065335;AGCD01065336;AGCD01065337;GBBH01011337;GBBH01166539;XM_005407384;XM_005407386 XP_005407441;XP_005407443 MODEL 8791740 protein-coding Clcn4 Cl-/H+ antiporter 4 ENCODES a protein that exhibits antiporter activity (ortholog); chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); non-motile cilium assembly (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN ciliary base (ortholog); early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955544 2922338 2999979 - 102008352 AGCD01071744;AGCD01071745;AGCD01071746;AGCD01071747;GBCB01042883;XM_005411399 XP_005411456 MODEL 8900944 protein-coding Plekhb2 pleckstrin homology domain containing B2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955459 594794 661152 + 102016896 AGCD01047942;AGCD01047943;AGCD01047944;AGCD01047945;AGCD01047946;AGCD01047947;GBCQ01001045;GBDJ01009535;XM_013521055 XP_013376509 MODEL 9065120 protein-coding Cd300e CD300e molecule ENCODES a protein that exhibits cocaine binding (ortholog); INVOLVED IN immune response (ortholog); FOUND IN cell surface (ortholog) NW_004955553 1516899 1587355 - 102012587 AGCD01072886;AGCD01072887;AGCD01072888;AGCD01072889;AGCD01072890;AGCD01072891;AGCD01072892;AGCD01072893;GBDK01238943;XM_005412248;XM_013508641 XP_005412305;XP_013364095 MODEL 8728704 protein-coding Rbm8a RNA binding motif protein 8A ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA metabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); thrombocytopenia (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955568 164050 166162 + 102030678 AGCD01074504;GBDF01051815;XM_005413424 XP_005413481 MODEL 8998739 protein-coding LOC102008162 uncharacterized protein KIAA1211 NW_004955447 14674162 14715780 - 102008162 AGCD01041019;AGCD01041020;GBBH01097866;GBDI01055287;XM_013518481 XP_013373935 MODEL 8825322 protein-coding Alg10 ALG10 alpha-1,2-glucosyltransferase INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Il (ortholog); developmental and epileptic encephalopathy 36 (ortholog); long QT syndrome 2 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955505 1844005 1854229 - 102004837 AGCD01064978;GBDJ01260417;XM_005407110 XP_005407167 MODEL 8714078 ncrna LOC102011654 uncharacterized LOC102011654 NW_004955476 4365503 4385423 - 102011654 AGCD01055280;GBDI01309143;XR_001230807;XR_001230808;XR_001230809;XR_001230810 MODEL 8983008 pseudo LOC102013264 sorting nexin-1 pseudogene NW_004955410 705354 707003 + 102013264 AGCD01010596 MODEL 9039248 protein-coding Rpusd2 RNA pseudouridine synthase domain containing 2 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); tRNA pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955416 7482226 7485654 + 102022282 AGCD01016984;GBDF01058049;XM_005381243 XP_005381300 MODEL 39134166 misc_rna 7SK 7SK RNA 9056956 pseudo LOC102005895 mitochondrial fission factor-like NW_004955455 5401970 5404213 + 102005895 AGCD01045725 MODEL 39133760 misc_rna 7SK 7SK RNA 8951352 ncrna LOC102008894 uncharacterized LOC102008894 NW_004955545 2826658 2829716 + 102008894 AGCD01071923;GBDF01218328;XR_264881 MODEL 8823826 ncrna LOC102004835 uncharacterized LOC102004835 NW_004955502 6301282 6361720 - 102004835 AGCD01064397;AGCD01064398;AGCD01064399;GBDF01305427;XR_264266 MODEL 8895145 protein-coding Il13 interleukin 13 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-13 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenoid hypertrophy (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955408 4046406 4049795 + 102030278 AGCD01008086;GBBH01173848;XM_005376104;XM_013508342 XP_005376161;XP_013363796 MODEL 8897736 ncrna LOC102007002 uncharacterized LOC102007002 NW_004955470 2465067 2474365 - 102007002 AGCD01052678;GBDF01193194;XR_001237015;XR_001237016 MODEL 10254371 protein-coding Apoc4 apolipoprotein C4 INVOLVED IN lipid storage (ortholog); triglyceride homeostasis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) NW_004955555 2018327 2018828 + 106147404 AGCD01073125;GBCB01035189;XM_013508676 XP_013364130 MODEL 9056314 protein-coding LOC102010850 cytochrome P450 1A1 ENCODES a protein that exhibits arachidonate monooxygenase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); amine metabolic process (ortholog); camera-type eye development (ortholog); PARTICIPATES IN gefitinib pharmacokinetics pathway; phase I biotransformation pathway via cytochrome P450; tamoxifen pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955450 3183958 3189488 + 102010850 AGCD01042426;GBDK01432211;XM_005393546;XM_005393547 XP_005393603;XP_005393604 MODEL 8799950 protein-coding Fgfbp1 fibroblast growth factor binding protein 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955480 8088670 8091882 + 102015009 AGCD01056715;AY462142;GBBH01115136;XM_005402520 AAR26541;XP_005402577 MODEL 9040257 pseudo LOC102009655 dynein assembly factor 3, axonemal homolog NW_004955441 695019 709803 - 102009655 AGCD01036728;AGCD01036729;AGCD01036730;AGCD01036731 MODEL 39132017 rrna 5S_rRNA 5S ribosomal RNA 8932339 protein-coding Atp6v1g2 ATPase H+ transporting V1 subunit G2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); melanosome (ortholog); synaptic vesicle membrane (ortholog) NW_004955437 86053 88355 - 102010195 AGCD01034101;GBBH01136619;XM_005389315;XM_013516927 XP_005389372;XP_013372381 MODEL 39134349 misc_rna 7SK 7SK RNA 8847679 protein-coding Cdk19 cyclin dependent kinase 19 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); positive regulation of apoptotic process (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy 87 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955411 35312722 35411951 - 102023789 AGCD01012427;AGCD01012428;AGCD01012429;GBBH01149560;GBDK01130876;XM_013510868 XP_013366322 MODEL 8755734 protein-coding Bud13 BUD13 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Achalasia-Progeroid Syndrome (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955412 18095069 18113386 - 102020228 AGCD01012924;AGCD01012925;AGCD01012926;GBDF01156360;XM_013511204;XM_013511205 XP_013366658;XP_013366659 MODEL 8719988 pseudo LOC102013999 protein mago nashi homolog 2 pseudogene NW_004955403 41539551 41539998 + 102013999 AGCD01002723 MODEL 8780748 protein-coding Ephb2 EPH receptor B2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Anorectal Malformations (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955452 2844713 2986790 + 102010660 AGCD01043905;AGCD01043906;AGCD01043907;GBBH01093218;XM_005394747;XM_005394748;XM_013519671 XP_005394804;XP_005394805;XP_013375125 MODEL 8746796 pseudo LOC102003030 high mobility group protein B2 pseudogene NW_004955420 23360748 23364378 - 102003030 AGCD01021245 MODEL 10152510 ncrna LOC106150335 uncharacterized LOC106150335 NW_004955472 924677 932016 - 106150335 AGCD01053365;XR_001237081 MODEL 8896292 ncrna LOC102004079 uncharacterized LOC102004079 NW_004955493 3577628 3582021 + 102004079 AGCD01061001;XR_264080 MODEL 8749846 protein-coding Cavin1 caveolae associated protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); rRNA primary transcript binding (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); protein secretion (ortholog); rRNA transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH congenital generalized lipodystrophy (ortholog); congenital generalized lipodystrophy type 4 (ortholog); diabetes mellitus (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955451 16364915 16374523 - 102017734 AGCD01043673;GBDK01017777;XM_005394458 XP_005394515 MODEL 8791315 protein-coding LOC102018249 nuclear RNA export factor 2-like NW_004956329 1022 3854 - 102018249 AGCD01079439;GBDK01180906;XM_005415196 XP_005415253 MODEL 8703585 protein-coding Aftph aftiphilin ENCODES a protein that exhibits clathrin binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN AP-1 adaptor complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955424 19835911 19899878 - 102007915 AGCD01024837;AGCD01024838;GBCQ01008748;XM_005385699;XM_005385701 XP_005385756;XP_005385758 MODEL 9019059 protein-coding Aspm assembly factor for spindle microtubules ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN brain development (ortholog); cerebral cortex development (ortholog); developmental growth (ortholog); ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); adenoid cystic carcinoma (ortholog); autosomal recessive primary microcephaly (ortholog); FOUND IN apical plasma membrane (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955406 33665675 33720468 - 102024187 AGCD01006486;AGCD01006487;GBDK01383873;XM_013521877 XP_013377331 MODEL 8784587 protein-coding Prickle2 prickle planar cell polarity protein 2 INVOLVED IN blastocyst formation (ortholog); embryonic brain development (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); autosomal dominant intellectual developmental disorder (ortholog); dyslexia (ortholog); FOUND IN apicolateral plasma membrane (ortholog); axon (ortholog); axon initial segment (ortholog) NW_004955517 1501322 1806996 + 102017152 AGCD01067600;AGCD01067601;AGCD01067602;AGCD01067603;AGCD01067604;AGCD01067605;AGCD01067606;AGCD01067607;GBBH01037181;GBBH01037182;XM_013506943 XP_013362397 MODEL 9028039 protein-coding Adam8 ADAM metallopeptidase domain 8 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); immunoglobulin receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); canonical NF-kappaB signal transduction (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN alpha9-beta1 integrin-ADAM8 complex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955477 10894288 10906961 - 102030074 AGCD01055709;GBDI01223313;XM_013503039;XM_013503040;XM_013503041;XM_013503042;XM_013503043;XM_013503044 XP_013358493;XP_013358494;XP_013358495;XP_013358496;XP_013358497;XP_013358498 MODEL 8999355 pseudo LOC102004458 protein regulator of cytokinesis 1 pseudogene NW_004955408 33268665 33270602 + 102004458 AGCD01008866 MODEL 39134167 misc_rna 7SK 7SK RNA 8816460 protein-coding LOC102007363 monocarboxylate transporter 1-like NW_004955435 16195389 16213361 - 102007363 AGCD01033300;AGCD01033301;GBDF01134218;XM_005388971 XP_005389028 MODEL 8955590 protein-coding Ankrd37 ankyrin repeat domain 37 FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955403 23655501 23658069 - 102028256 AGCD01002249;GBDI01027968;XM_005373469;XM_013513001 XP_005373526;XP_013368455 MODEL 39131825 rrna 5S_rRNA 5S ribosomal RNA 9054254 protein-coding Rpusd3 RNA pseudouridine synthase D3 ENCODES a protein that exhibits tRNA pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); ribonucleoprotein granule (ortholog) NW_004955561 1358003 1361634 - 102009998 AGCD01073851;GBDI01080735;XM_005413036;XM_005413037;XM_005413038;XM_013509112 XP_005413093;XP_005413094;XP_005413095;XP_013364566 MODEL 10189816 protein-coding CUNH8orf89 chromosome unknown C8orf89 homolog ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955444 6918632 6954551 + 106149348 AGCD01038879;AGCD01038880;AGCD01038881;AGCD01038882;AGCD01038883;GBBH01016223;GBDI01028034;XM_013518128;XM_013518129;XM_013518130 XP_013373582;XP_013373583;XP_013373584 MODEL 9047479 pseudo LOC102013643 DEP domain-containing protein 1A-like NW_004955433 16183789 16212486 - 102013643 AGCD01031790 MODEL 8863113 protein-coding LOC102005897 keratin-associated protein 10-11-like NW_004955407 41627363 41628512 + 102005897 AGCD01007874;XM_005375888 XP_005375945 MODEL 9059698 protein-coding Snx12 sorting nexin 12 ENCODES a protein that exhibits enzyme binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN negative regulation of early endosome to late endosome transport (ortholog); negative regulation of gene expression (ortholog); negative regulation of protein catabolic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN early endosome (ortholog) NW_004955475 10632938 10641452 - 102027521 AGCD01055105;GBCE01118453;XM_005401637 XP_005401694 MODEL 8724016 ncrna LOC102012057 uncharacterized LOC102012057 NW_004955406 39330833 39331560 + 102012057 AGCD01006626;GBDK01343682;XR_259526 MODEL 8804036 protein-coding Sez6l2 seizure related 6 homolog like 2 INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); synapse maturation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); neuronal cell body (ortholog) NW_004955493 7059865 7080524 + 102004291 AGCD01061154;GBCE01082309;XM_005405222;XM_005405223;XM_013504789;XM_013504790 XP_005405279;XP_005405280;XP_013360243;XP_013360244 MODEL 39134043 misc_rna 7SK 7SK RNA 8905429 protein-coding Wbp2nl WBP2 N-terminal like INVOLVED IN regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN perinuclear theca (ortholog); sperm flagellum (ortholog); sperm head (ortholog) NW_004955413 27402614 27442106 + 102030406 AGCD01014504;AGCD01014505;AGCD01014506;AGCD01014507;GBDF01123498;XM_005379389;XM_005379391;XM_005379392;XM_005379393;XM_005379394 XP_005379446;XP_005379448;XP_005379449;XP_005379450;XP_005379451 MODEL 8760196 protein-coding Rbms1 RNA binding motif single stranded interacting protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955449 13164306 13368011 + 102025194 AGCD01042131;AGCD01042132;AGCD01042133;AGCD01042134;GBDJ01136799;XM_005393344;XM_005393345;XM_005393346;XM_005393347;XM_005393348 XP_005393401;XP_005393402;XP_005393403;XP_005393404;XP_005393405 MODEL 8739981 ncrna LOC102008517 uncharacterized LOC102008517 NW_004955412 20462018 20473633 + 102008517 AGCD01013009;GBDF01220421;XR_260003 MODEL 8754830 protein-coding Cd300lb CD300 molecule like family member b ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); neutrophil mediated immunity (ortholog); positive regulation of mast cell activation (ortholog); ASSOCIATED WITH melanoma (ortholog) NW_004955553 1382594 1392592 - 102009426 AGCD01072880;GBDK01279225;XM_005412238 XP_005412295 MODEL 8968845 protein-coding LOC102011663 olfactory receptor 2T27-like NW_004955418 30179310 30182515 - 102011663 AGCD01019506;XM_013512880 XP_013368334 MODEL 39134350 misc_rna 7SK 7SK RNA 8889839 ncrna LOC102013265 uncharacterized LOC102013265 NW_004955411 20689282 20717825 - 102013265 AGCD01012060;AGCD01012061;GBDF01278033;XR_001232800;XR_001232801;XR_001232802;XR_259939 MODEL 8973023 protein-coding Trmt61a tRNA methyltransferase 61A ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); tRNA (adenine(58)-N1)-methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Cornelia de Lange syndrome (ortholog); esophageal cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN tRNA (m1A) methyltransferase complex (ortholog) NW_004955538 2383666 2393667 + 102010944 AGCD01071124;GBDI01164437;XM_005410781 XP_005410838 MODEL 8784308 protein-coding Dll3 delta like canonical Notch ligand 3 ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN compartment pattern specification (ortholog); negative regulation of astrocyte differentiation (ortholog); negative regulation of neurogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Congenital Abnormalities (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 70714 78831 - 102013276 AGCD01051680;AGCD01051681;GBDF01075164;XM_005400283 XP_005400340 MODEL 8722502 pseudo LOC102007365 double-stranded RNA-binding protein Staufen homolog 1 pseudogene NW_004955530 1457860 1459504 - 102007365 AGCD01069884;XR_264702 MODEL 8706936 protein-coding Apod apolipoprotein D ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN glucose metabolic process (ortholog); lipid metabolic process (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); gestational diabetes (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); dendrite (ortholog) NW_004955420 13553254 13570357 + 102024118 AGCD01020925;GBCE01000148;XM_005383177;XM_013513581 XP_005383234;XP_013369035 MODEL 8987339 protein-coding Acadl acyl-CoA dehydrogenase long chain ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN carnitine catabolic process (ortholog); carnitine metabolic process, CoA-linked (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); long chain 3-hydroxyacyl-CoA dehydrogenase deficiency (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955457 5266032 5300632 + 102025215 AGCD01046815;GBCQ01006918;XM_013520783 XP_013376237 MODEL 8701629 protein-coding Alg11 ALG11 alpha-1,2-mannosyltransferase ENCODES a protein that exhibits GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955431 5297477 5320653 + 102007144 AGCD01030019;GBDF01195619;XM_005387615;XM_005387616;XM_013515772;XM_013515773;XR_001234601 XP_005387672;XP_005387673;XP_013371226;XP_013371227 MODEL 8752660 protein-coding Bud23 BUD23 rRNA methyltransferase and ribosome maturation factor ENCODES a protein that exhibits protein heterodimerization activity (ortholog); rRNA (guanine) methyltransferase activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955456 14047409 14057483 - 102024647 AGCD01046632;GBBH01060290;XM_005396771 XP_005396828 MODEL 9018127 pseudo LOC102014002 cyclin-G1-like NW_004955405 15776517 15779140 - 102014002 AGCD01004952 MODEL 9052564 protein-coding LOC102004847 interferon alpha-4-like NW_004955434 23359685 23360292 - 102004847 AGCD01032705;XM_013516392 XP_013371846 MODEL 8798963 protein-coding LOC102003032 uncharacterized LOC102003032 NW_004955421 8414832 8416723 + 102003032 AGCD01021811;GBDF01288165;XM_005383920 XP_005383977 MODEL 8764453 protein-coding Clcn5 Cl-/H+ antiporter 5 ENCODES a protein that exhibits identical protein binding (ortholog); voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); endocytosis (ortholog); renal system process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute Tubulointerstitial Nephritis (ortholog); benign familial hematuria (ortholog); FOUND IN apical part of cell (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955543 1076988 1256352 + 102015983 AGCD01071612;AGCD01071613;AGCD01071614;AGCD01071615;GBBH01191026;XM_005411351;XM_013508169;XM_013508170;XM_013508171 XP_005411408;XP_013363623;XP_013363624;XP_013363625 MODEL 8914210 protein-coding Plekhd1 pleckstrin homology and coiled-coil domain containing D1 ASSOCIATED WITH Breast Neoplasms (ortholog); nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955466 853902 878813 - 102015091 AGCD01050680;GBCB01056747;GBCE01126830;XM_013521969 XP_013377423 MODEL 8913282 protein-coding LOC102007003 ubiquilin-3 NW_004955414 21412848 21415565 - 102007003 AGCD01015418;GBDF01007353;XM_005380091 XP_005380148 MODEL 8842892 pseudo LOC102004081 cationic trypsin-3-like NW_004955494 1233143 1236496 + 102004081 AGCD01061392 MODEL 8785101 pseudo LOC102010851 transmembrane protein 69 pseudogene NW_004955402 725985 734220 - 102010851 AGCD01000031 MODEL 8883822 ncrna LOC102009657 uncharacterized LOC102009657 NW_004955442 3325633 3327511 + 102009657 AGCD01037505;GBDF01145907;XR_262111 MODEL 8760097 protein-coding Bmerb1 bMERB domain containing 1 INVOLVED IN negative regulation of cell motility involved in cerebral cortex radial glia guided migration (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Thoracic Aortic Aneurysm 4 (ortholog); FOUND IN microtubule cytoskeleton (ortholog) NW_004955442 317334 442514 + 102022429 AGCD01037419;AGCD01037420;AGCD01037421;AGCD01037422;AGCD01037423;AGCD01037424;AGCD01037425;GBDF01078842;XM_005391062;XM_005391063 XP_005391119;XP_005391120 MODEL 8857190 pseudo LOC102022344 uncharacterized LOC102022344 NW_004955448 10720131 10725989 + 102022344 AGCD01041500 MODEL 9036363 protein-coding Cavin2 caveolae associated protein 2 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN plasma membrane tubulation (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 7459038 7471809 + 102023546 AGCD01001857;GBDK01390302;XM_005373285 XP_005373342 MODEL 39132018 rrna 5S_rRNA 5S ribosomal RNA 8777360 protein-coding Atp6v1g3 ATPase H+ transporting V1 subunit G3 ENCODES a protein that exhibits ATPase binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955406 34910498 34927745 - 102029041 AGCD01006515;GBCC01042330;XM_005375134 XP_005375191 MODEL 9032843 protein-coding LOC102004463 olfactory receptor 8G1-like NW_004955412 25028370 25030457 + 102004463 AGCD01013133;XM_005378412;XM_013510986 XP_005378469;XP_013366440 MODEL 9060079 protein-coding Cd300lf CD300 molecule like family member f ENCODES a protein that exhibits ceramide binding (ortholog); identical protein binding (ortholog); interleukin-4 receptor binding (ortholog); INVOLVED IN interleukin-13-mediated signaling pathway (ortholog); negative regulation of apoptotic cell clearance (ortholog); negative regulation of mast cell activation (ortholog) NW_004955553 1596406 1610479 - 102011595 AGCD01072893;GBDK01019376;XM_005412247;XM_013508640 XP_005412304;XP_013364094 MODEL 9027750 pseudo LOC102011675 BTB/POZ domain-containing protein KCTD3 pseudogene NW_004955422 13339184 13342304 + 102011675 AGCD01022821 MODEL 39133761 misc_rna 7SK 7SK RNA 9043865 ncrna LOC102013267 uncharacterized LOC102013267 NW_004955464 13689362 13696059 + 102013267 AGCD01050291;GBCQ01087996;XR_001236689;XR_263217 MODEL 8930779 protein-coding Snx13 sorting nexin 13 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); PARTICIPATES IN epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog) NW_004955410 20792659 20925907 - 102024195 AGCD01011052;AGCD01011053;AGCD01011054;GBCE01070030;XM_005377341;XM_005377342 XP_005377398;XP_005377399 MODEL 8892956 ncrna LOC102008163 uncharacterized LOC102008163 NW_004955448 3515139 3550351 + 102008163 AGCD01041335;GBDF01279163;XR_262458 MODEL 10182145 ncrna LOC106150336 uncharacterized LOC106150336 NW_004955472 1698010 1699112 + 106150336 AGCD01053409;GBDK01024649;XR_001237082 MODEL 8962793 pseudo LOC102018254 eukaryotic translation initiation factor 1 pseudogene NW_004955452 16336794 16337133 + 102018254 AGCD01044507 MODEL 9061509 protein-coding Wbp4 WW domain binding protein 4 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955404 51046245 51094245 + 102011395 AGCD01004543;AGCD01004544;AGCD01004545;AGCD01004546;AGCD01004547;GBBH01214258;GBCE01024729;XM_013516774;XM_013516775 XP_013372228;XP_013372229 MODEL 8953091 protein-coding Cep85l centrosomal protein 85L INVOLVED IN neuron migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN pericentriolar material (ortholog) NW_004955436 1352481 1482061 - 102023738 AGCD01033575;AGCD01033576;AGCD01033577;GBBH01214405;GBDF01050037;XM_013516602;XR_001234950;XR_001234951;XR_001234952;XR_001234953;XR_001234954;XR_001234955;XR_001234956 XP_013372056 MODEL 8736772 protein-coding Rbms2 RNA binding motif single stranded interacting protein 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955458 4104124 4149120 + 102010873 AGCD01047371;AGCD01047372;AGCD01047373;AGCD01047374;AGCD01047375;AGCD01047376;AGCD01047377;AGCD01047378;AGCD01047379;GBCB01019880;XM_005397318;XM_005397319;XM_013520869;XM_013520870;XM_013520871;XM_013520872 XP_005397375;XP_005397376;XP_013376323;XP_013376324;XP_013376325;XP_013376326 MODEL 9065947 protein-coding Aga aspartylglucosaminidase ENCODES a protein that exhibits identical protein binding (ortholog); N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity (ortholog); ASSOCIATED WITH aspartylglucosaminuria (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955403 30471809 30482653 + 102014731 AGCD01002398;GBDF01156718;XM_005373511 XP_005373568 MODEL 8700541 protein-coding Prickle3 prickle planar cell polarity protein 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Leber hereditary optic neuropathy (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955543 662438 673386 - 102010947 AGCD01071598;GBBH01101699;XM_005411332 XP_005411389 MODEL 8701449 protein-coding Adam9 ADAM metallopeptidase domain 9 ENCODES a protein that exhibits collagen binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955463 14545425 14646498 + 102029159 AGCD01049912;AGCD01049913;AGCD01049914;GBCB01026114;XM_005398463 XP_005398520 MODEL 8767681 protein-coding LOC102010067 basic proline-rich protein-like NW_004955424 20327818 20328443 - 102010067 AGCD01024848;GBBH01018048;GBDK01212327;XM_013514645 XP_013370099 MODEL 8700689 protein-coding Slc33a1 solute carrier family 33 member 1 ENCODES a protein that exhibits acetyl-CoA transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acetyl-CoA transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cataract (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955448 6885153 6905641 - 102016652 AGCD01041396;GBDI01172474;XM_005393070;XM_005393071 XP_005393127;XP_005393128 MODEL 39134168 misc_rna 7SK 7SK RNA 8899852 protein-coding LOC102005899 uncharacterized LOC102005899 NW_004955408 4190159 4193209 - 102005899 AGCD01008091;GBDI01371406;XM_005376117 XP_005376174 MODEL 8904017 ncrna LOC102013650 uncharacterized LOC102013650 NW_004955547 653716 654466 - 102013650 AGCD01072171;GBDI01166441;XR_001232231 MODEL 8897615 protein-coding Rpusd4 RNA pseudouridine synthase D4 ENCODES a protein that exhibits mitochondrial ribosomal large subunit rRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA binding (ortholog); INVOLVED IN mitochondrial RNA modification (ortholog); mitochondrial tRNA pseudouridine synthesis (ortholog); mRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955412 27231371 27239366 - 102028282 AGCD01013231;AGCD01013232;GBDK01358362;XM_005378485;XM_005378487 XP_005378542;XP_005378544 MODEL 8764255 pseudo LOC102008895 60S ribosomal protein L26-like NW_004955441 12522219 12523098 + 102008895 AGCD01037123 MODEL 8753307 protein-coding Dll4 delta like canonical Notch ligand 4 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve morphogenesis (ortholog); blood vessel lumenization (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 6 (ortholog) NW_004955416 7807049 7816346 + 102030417 AGCD01017013;GBCB01111083;XM_005381271 XP_005381328 MODEL 8887105 protein-coding LOC102012060 cytochrome c oxidase subunit 6A1, mitochondrial ASSOCIATED WITH Charcot-Marie-Tooth disease recessive intermediate D (ortholog); colon adenocarcinoma (ortholog); neuropathy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955455 11201031 11203644 - 102012060 AGCD01045986;GBCQ01009037;XM_005396510 XP_005396567 MODEL 8929758 protein-coding Aspn asporin ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN bone mineralization (ortholog); negative regulation of tooth mineralization (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); degenerative disc disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell projection (ortholog); extracellular matrix (ortholog) NW_004955515 5322074 5345715 + 102027220 AGCD01067348;GBDK01137117;XM_005408906 XP_005408963 MODEL 9021151 ncrna LOC102004848 uncharacterized LOC102004848 NW_004955435 5016629 5017589 - 102004848 AGCD01032870;GBDF01300438;XR_261661 MODEL 8923585 protein-coding Snx14 sorting nexin 14 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 20 (ortholog); brachydactyly (ortholog); FOUND IN late endosome (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955411 12967980 13048839 - 102020226 AGCD01011862;AGCD01011863;AGCD01011864;AGCD01011865;AGCD01011866;GBDF01122706;XM_005377702;XM_005377703 XP_005377759;XP_005377760 MODEL 8720990 pseudo LOC102008519 mitochondrial import inner membrane translocase subunit TIM14-like NW_004955412 23530210 23530974 + 102008519 AGCD01013090 MODEL 8978867 protein-coding Cdk2 cyclin dependent kinase 2 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein kinase activity (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); centriole replication (ortholog); DNA damage response (ortholog); PARTICIPATES IN G1/S transition pathway; interleukin-2 signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cajal body (ortholog); centrosome (ortholog); chromosome, telomeric region (ortholog) NW_004955458 3555603 3561063 + 102024879 AGCD01047319;GBDF01043717;XM_005397270;XM_005397271 XP_005397327;XP_005397328 MODEL 8982520 protein-coding Ephb3 EPH receptor B3 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 22900588 22919924 - 102016275 AGCD01021213;AGCD01021214;GBDI01185928;GBDJ01230601;XM_013513587 XP_013369041 MODEL 9028430 pseudo LOC102022348 40S ribosomal protein S2 pseudogene NW_004955894 10943 11793 + 102022348 AGCD01078600 MODEL 9046039 protein-coding Bmf Bcl2 modifying factor INVOLVED IN anoikis (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of autophagy (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal vesicle (ortholog); actin cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955416 7048654 7068917 - 102014243 AGCD01016961;GBBH01186132;XM_005381214;XM_005381215 XP_005381271;XP_005381272 MODEL 8989621 protein-coding Ankrd39 ankyrin repeat domain 39 ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); thymoma (ortholog) NW_004955470 4203363 4211560 - 102023576 AGCD01052728;GBCQ01042505;XM_005400684 XP_005400741 MODEL 8853036 protein-coding Cavin3 caveolae associated protein 3 ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); cortical actin cytoskeleton organization (ortholog); negative regulation of fermentation (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955414 22052885 22054672 - 102018916 AGCD01015441;GBDJ01019235;XM_005380131 XP_005380188 MODEL 8792305 pseudo LOC102004464 ubiquitin-like-conjugating enzyme ATG3 pseudogene NW_004955466 12161005 12161997 - 102004464 AGCD01051113;XR_263318 MODEL 8775340 protein-coding CUNH9orf152 chromosome unknown C9orf152 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog) NW_004955419 16910030 16917851 + 102017237 AGCD01020135;GBDJ01422372;XM_005382746 XP_005382803 MODEL 8948764 protein-coding Trmt61b tRNA methyltransferase 61B ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); rRNA (adenine) methyltransferase activity (ortholog); tRNA (adenine(58)-N1)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial tRNA processing (ortholog); mRNA processing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955469 10744814 10771560 - 102014440 AGCD01052549;GBDI01162186;XM_013522617 XP_013378071 MODEL 9056274 pseudo LOC102007368 proline-rich nuclear receptor coactivator 1 pseudogene NW_004955437 795083 811162 - 102007368 AGCD01034163;AGCD01034164;AGCD01034165;AGCD01034166 MODEL 39134044 misc_rna 7SK 7SK RNA 39133762 misc_rna 7SK 7SK RNA 8759185 protein-coding Il13ra1 interleukin 13 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-13 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-13-mediated signaling pathway (ortholog); positive regulation of B cell proliferation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH atopic dermatitis (ortholog); Breast Cancer, Familial (ortholog); bronchiolitis obliterans (ortholog); FOUND IN interleukin-13 receptor complex (ortholog); interleukin-4 receptor complex (ortholog); plasma membrane (ortholog) NW_004955534 1157758 1205158 - 102016635 AGCD01070487;GBDI01133443;XM_005410457;XM_013507707 XP_005410514;XP_013363161 MODEL 8760138 protein-coding Fgfr1 fibroblast growth factor receptor 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); auditory receptor cell development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN ceric oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acrocephalosyndactylia (ortholog); acute myeloid leukemia (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955463 14013247 14064354 - 102024657 AGCD01049897;AGCD01049898;AGCD01049899;GBDJ01132958;XM_005398449;XM_013521506;XM_013521508;XM_013521509;XM_013521510;XM_013521511;XM_013521512 XP_005398506;XP_013376960;XP_013376962;XP_013376963;XP_013376964;XP_013376965;XP_013376966 MODEL 9038680 protein-coding Acadm acyl-CoA dehydrogenase medium chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); identical protein binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN axon (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) NW_004955423 17173648 17199189 - 102025477 AGCD01023847;GBCQ01008487;XM_005385228 XP_005385285 MODEL 8763580 protein-coding Bud31 BUD31 spliceosome associated protein ENCODES a protein that exhibits nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955460 15083472 15092217 + 102009584 AGCD01048768;GBDF01047466;XM_005397944;XM_005397945 XP_005398001;XP_005398002 MODEL 8835106 protein-coding LOC102003033 HRAS-like suppressor 3 NW_004955422 21415634 21440465 + 102003033 AGCD01023116;GBDK01181579;XM_005384673;XM_013514096;XM_013514097 XP_005384730;XP_013369550;XP_013369551 MODEL 8746054 protein-coding Clcn6 Cl-/H+ antiporter 6 ENCODES a protein that exhibits voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN late endosome membrane (ortholog) NW_004955486 2066317 2096317 - 102005713 AGCD01058987;AGCD01058988;GBBH01208092;XM_005403984;XM_005403986;XM_013504261 XP_005404041;XP_005404043;XP_013359715 MODEL 8946358 pseudo LOC102007005 etoposide-induced protein 2.4 homolog pseudogene NW_004955414 3807141 3816292 + 102007005 AGCD01014841 MODEL 8827207 ncrna LOC102010852 uncharacterized LOC102010852 NW_004955450 14836986 14845311 - 102010852 AGCD01042764;GBDF01009911;XR_262554;XR_262555 MODEL 39132020 rrna 5S_rRNA 5S ribosomal RNA 8784244 protein-coding LOC102009660 protein HIRA ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN gastrulation (ortholog); muscle cell differentiation (ortholog); osteoblast differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); HIR complex (ortholog); nucleoplasm (ortholog) NW_004955442 18581370 18673590 + 102009660 AGCD01038011;AGCD01038012;GBCQ01129723;GBDI01264132;XM_005391780 XP_005391837 MODEL 39134351 misc_rna 7SK 7SK RNA 39131826 rrna 5S_rRNA 5S ribosomal RNA 8773316 protein-coding Wdcp WD repeat and coiled coil containing ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN protein complex oligomerization (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955469 6236653 6261753 - 102023140 AGCD01052374;AGCD01052375;GBCE01018761;XM_005400370;XM_005400371 XP_005400427;XP_005400428 MODEL 39134169 misc_rna 7SK 7SK RNA 8712499 ncrna LOC102005902 uncharacterized LOC102005902 NW_004955409 9536684 9555161 + 102005902 AGCD01009443;AGCD01009444;GBDF01156061;XR_259761 MODEL 9021213 protein-coding Ankrd40 ankyrin repeat domain 40 ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 11078839 11085303 + 102010763 AGCD01043342;GBDI01172269;GBDK01132584;XM_013519433;XM_013519434 XP_013374887;XP_013374888 MODEL 8756274 ncrna LOC102013274 uncharacterized LOC102013274 NW_004955413 15656502 15680187 + 102013274 AGCD01014081;AGCD01014082;AGCD01014083;AGCD01014084;GBDI01191119;XR_001232941;XR_260081 MODEL 8788169 protein-coding Sf1 splicing factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN Leydig cell differentiation (ortholog); male sex determination (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Enuresis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955422 20391340 20406555 + 102028550 AGCD01023078;AGCD01023079;GBCE01029052;GBDI01001163;XM_013514043;XM_013514044;XM_013514045;XM_013514046 XP_013369497;XP_013369498;XP_013369499;XP_013369500 MODEL 8757357 ncrna LOC102008896 uncharacterized LOC102008896 NW_004955547 2750784 2754477 + 102008896 AGCD01072294;GBBH01190398;XR_001232234;XR_001232235;XR_264910 MODEL 8940040 protein-coding LOC102004083 BPI fold-containing family A member 2 NW_004955422 28150582 28155982 - 102004083 AGCD01023344;XM_013513841 XP_013369295 MODEL 9016186 pseudo LOC102018255 ubiquitin-60S ribosomal protein L40 pseudogene NW_004955405 9748083 9748858 - 102018255 AGCD01004792 MODEL 8895475 protein-coding Dlst dihydrolipoamide S-succinyltransferase ENCODES a protein that exhibits acyltransferase activity (ortholog); dihydrolipoyllysine-residue glutaryltransferase activity (ortholog); dihydrolipoyllysine-residue succinyltransferase activity (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955523 660413 680878 - 102011235 AGCD01068474;AGCD01068475;GBBH01064906;GBDJ01128538;XM_013507173 XP_013362627 MODEL 8717173 protein-coding LOC102008165 filaggrin-2 NW_004955589 115942 127045 + 102008165 AGCD01076155;AGCD01076156;GBCC01029912;XM_005414527;XM_013509950;XM_013509951 XP_005414584;XP_013365404;XP_013365405 MODEL 8955547 protein-coding Il13ra2 interleukin 13 receptor subunit alpha 2 ENCODES a protein that exhibits cytokine receptor activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); immunoglobulin mediated immune response (ortholog); interleukin-13-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955490 708144 758195 + 102026754 AGCD01060082;AGCD01060083;AGCD01060084;AGCD01060085;AGCD01060086;GBCE01123394;XM_005404624;XM_013504555;XM_013504556;XM_013504557;XM_013504558;XM_013504559;XM_013504560 XP_005404681;XP_013360009;XP_013360010;XP_013360011;XP_013360012;XP_013360013;XP_013360014 MODEL 8810815 protein-coding Rbms3 RNA binding motif single stranded interacting protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); poly(A) binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955430 20714647 21394049 + 102020364 AGCD01029751;AGCD01029752;AGCD01029753;AGCD01029754;AGCD01029755;AGCD01029756;AGCD01029757;AGCD01029758;AGCD01029759;AGCD01029760;AGCD01029761;AGCD01029762;AGCD01029763;AGCD01029764;AGCD01029765;GBCB01027277;XM_005387516;XM_013515627;XM_013515628;XM_013515629;XM_013515630;XM_013515631 XP_005387573;XP_013371081;XP_013371082;XP_013371083;XP_013371084;XP_013371085 MODEL 8815559 pseudo LOC102004085 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like NW_004955495 2998284 2999787 + 102004085 AGCD01061814 MODEL 8752126 protein-coding Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to glycine (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955458 5436544 5448201 - 102002999 AGCD01047492;AGCD01047493;GBBH01126322;GBDJ01164672;XM_013520942 XP_013376396 MODEL 8805143 protein-coding Prickle4 prickle planar cell polarity protein 4 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955437 8177451 8182992 + 102016092 AGCD01034480;GBDF01298022;XM_005389698;XM_005389699;XM_005389700;XM_013517057;XM_013517058;XM_013517059;XM_013517060;XM_013517061;XM_013517062;XM_013517063;XM_013517064;XM_013517065 XP_005389755;XP_005389756;XP_005389757;XP_013372511;XP_013372512;XP_013372513;XP_013372514;XP_013372515;XP_013372516;XP_013372517;XP_013372518;XP_013372519 MODEL 8829883 pseudo LOC102011682 rho guanine nucleotide exchange factor 38-like NW_004955502 656842 673369 - 102011682 AGCD01064247 MODEL 8777419 protein-coding Cd300lg CD300 molecule like family member g ENCODES a protein that exhibits IgM binding (ortholog); INVOLVED IN immunoglobulin transcytosis in epithelial cells (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955451 17098094 17121320 + 102005098 AGCD01043717;AGCD01043718;AGCD01043719;AGCD01043720;GBDK01001371;XM_005394643 XP_005394700 MODEL 8922430 protein-coding Atp6v1h ATPase H+ transporting V1 subunit H ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN endocytosis (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog) NW_004955454 13099488 13213018 - 102004237 AGCD01045428;AGCD01045429;AGCD01045430;AGCD01045431;GBCE01095685;XM_005396063;XM_005396064;XM_005396065 XP_005396120;XP_005396121;XP_005396122 MODEL 8962040 protein-coding LOC102013653 carcinoembryonic antigen-related cell adhesion molecule 3 NW_004955555 1015663 1019840 - 102013653 AGCD01073055;GBDI01085734;XM_005415410 XP_005415467 MODEL 8872891 protein-coding Slc33a2 solute carrier family 33 member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955454 3132761 3139501 + 102013248 AGCD01045057;GBDI01264546;XM_005395914;XM_005395915;XM_005395916;XM_005395917;XM_013520084 XP_005395971;XP_005395972;XP_005395973;XP_005395974;XP_013375538 MODEL 8868043 protein-coding Bmi1 BMI1 proto-oncogene, polycomb ring finger ENCODES a protein that exhibits chromatin binding (ortholog); promoter-specific chromatin binding (ortholog); RING-like zinc finger domain binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); chronic pancreatitis (ortholog); FOUND IN cytoplasm (ortholog); heterochromatin (ortholog); nuclear body (ortholog) NW_004955429 6548586 6553730 - 102017361 AGCD01028551;GBDK01001879;GBDK01001881;XM_013515495 XP_013370949 MODEL 8941553 ncrna LOC102009664 uncharacterized LOC102009664 NW_004955566 1804100 1820455 - 102009664 AGCD01074369;GBDI01312924;XR_001232397;XR_001232398;XR_001232399;XR_265024 MODEL 8914907 ncrna LOC102014006 uncharacterized LOC102014006 NW_004955405 33602692 33668908 + 102014006 AGCD01005360;GBDF01094861;XR_001236072;XR_259427 MODEL 8729357 ncrna LOC102004468 uncharacterized LOC102004468 NW_004955413 29719091 29721582 + 102004468 AGCD01014592;GBDF01189455;XR_001233035;XR_001233036 MODEL 39133763 misc_rna 7SK 7SK RNA 39134045 misc_rna 7SK 7SK RNA 8871419 protein-coding Rrad RRAD, Ras related glycolysis inhibitor and calcium channel regulator ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of heart rate by epinephrine-norepinephrine (ortholog); regulation of cardiac muscle contraction by calcium ion signaling (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiac Arrhythmias (ortholog); Cardiomegaly (ortholog); FOUND IN plasma membrane (ortholog); T-tubule (ortholog) NW_004955433 23426258 23439094 - 102016839 AGCD01031960;AGCD01031961;AGCD01031962;AGCD01031963;GBCE01160070;GBCQ01004333;XM_013516112 XP_013371566 MODEL 10139373 ncrna LOC106150337 uncharacterized LOC106150337 NW_004955402 10721653 10722383 - 106150337 AGCD01000288;GBDJ01161572;XR_001237098 MODEL 8754373 protein-coding Aspnat aspartate N-acetyltransferase ENCODES a protein that exhibits L-aspartate N-acetyltransferase activity (ortholog); INVOLVED IN acetate metabolic process (ortholog); aspartate metabolic process (ortholog); positive regulation of dopamine uptake involved in synaptic transmission (ortholog); ASSOCIATED WITH microcephaly (ortholog); N-Acetylaspartate Deficiency (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial matrix (ortholog) NW_004955514 1207310 1213732 + 102021269 AGCD01067041;GBCE01176411;GBCQ01097994;XM_013506831 XP_013362285 MODEL 8756688 pseudo LOC102003038 splicing factor 3B subunit 4 pseudogene NW_004955424 14377491 14379086 - 102003038 AGCD01024652 MODEL 8906564 protein-coding Snx15 sorting nexin 15 FOUND IN cytosol (ortholog) NW_004955422 20149570 20158076 - 102020021 AGCD01023068;GBDF01047995;XM_005384526 XP_005384583 MODEL 8837022 protein-coding Cdk2ap1 cyclin dependent kinase 2 associated protein 1 ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN face morphogenesis (ortholog); in utero embryonic development (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955482 5588683 5593896 + 102021011 AGCD01057343;GBBH01033326;GBDJ01088754;XM_013503557 XP_013359011 MODEL 8812122 protein-coding Adamdec1 ADAM like decysin 1 INVOLVED IN cell differentiation (ortholog); extracellular matrix organization (ortholog); inflammatory response (ortholog) NW_004955403 47421102 47439501 + 102016876 AGCD01002889;GBDF01074355;XM_005373906 XP_005373963 MODEL 8788053 protein-coding LOC102022349 collagen alpha-1(I) chain-like NW_004955451 13935187 13936367 + 102022349 AGCD01043514;GBDK01343386;XM_005394291 XP_005394348 MODEL 39131827 rrna 5S_rRNA 5S ribosomal RNA 9000373 protein-coding Apoe apolipoprotein E ENCODES a protein that exhibits amyloid-beta binding (ortholog); antioxidant activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); amyloid precursor protein metabolic process (ortholog); artery development (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); adenocarcinoma (ortholog); age related macular degeneration 1 (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); chylomicron remnant (ortholog) NW_004955555 1998170 2002003 + 102021605 AGCD01073120;AGCD01073121;GBBH01000498;GBDJ01017825;XM_013508700 XP_013364154 MODEL 8720573 protein-coding Alg12 ALG12 alpha-1,6-mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clubfoot (ortholog) NW_004955413 33030994 33039622 - 102017860 AGCD01014655;GBCB01058939;XM_005379529 XP_005379586 MODEL 8824114 protein-coding LOC102012063 NEDD4-binding protein 2-like 2 NW_004955407 28220425 28222169 + 102012063 AGCD01007577;XM_013505975 XP_013361429 MODEL 39134170 misc_rna 7SK 7SK RNA 8785572 protein-coding LOC102004852 trace amine-associated receptor 7a-like NW_004955436 13109272 13110333 - 102004852 AGCD01033854;XM_005389306 XP_005389363 MODEL 8756777 ncrna LOC102008525 uncharacterized LOC102008525 NW_004955414 26180989 26187857 + 102008525 AGCD01015640;GBDF01208439;XR_260197 MODEL 8868094 protein-coding Sf3a1 splicing factor 3a subunit 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955455 4579153 4601942 - 102020308 AGCD01045681;GBBH01034806;XM_005396258 XP_005396315 MODEL 8920561 pseudo LOC102018266 suppressor of cytokine signaling 2 pseudogene NW_004955409 12562778 12566437 - 102018266 AGCD01009552 MODEL 8848102 pseudo LOC102008167 sorting nexin-2-like NW_004955402 45656377 45658152 - 102008167 AGCD01001141 MODEL 8699801 protein-coding Dlx1 distal-less homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to BMP stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955449 2920705 2924667 - 102015676 AGCD01041839;GBCC01012740;XM_005393218 XP_005393275 MODEL 9047452 ncrna LOC102010853 uncharacterized LOC102010853 NW_004955403 10441158 10452838 + 102010853 AGCD01001921;XR_259168 MODEL 39132021 rrna 5S_rRNA 5S ribosomal RNA 8968190 protein-coding Cavin4 caveolae associated protein 4 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); ASSOCIATED WITH melanoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955419 25181395 25188951 - 102011007 AGCD01020374;GBCB01005766;XM_005382806 XP_005382863 MODEL 8951452 protein-coding Plekhf1 pleckstrin homology and FYVE domain containing 1 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN endosome organization (ortholog); positive regulation of autophagy (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); Ovarian Neoplasms (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog) NW_004955468 7934024 7943499 - 102012182 AGCD01052017;GBBH01126266;XM_005400111 XP_005400168 MODEL 8798402 protein-coding Il15 interleukin 15 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to vitamin D (ortholog); extrathymic T cell selection (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955471 1496352 1583919 - 102011302 AGCD01052985;GBDJ01349954;XM_005400859;XM_005400860;XM_013522919 XP_005400916;XP_005400917;XP_013378373 MODEL 8805897 protein-coding Wdfy1 WD repeat and FYVE domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); INVOLVED IN positive regulation of toll-like receptor 3 signaling pathway (ortholog); positive regulation of toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); nucleus (ortholog) NW_004955453 10101576 10148205 + 102020198 AGCD01044782;GBDF01044991;XM_005395485 XP_005395542 MODEL 8972169 protein-coding LOC102004087 zinc finger protein 709-like NW_004955497 2376 35406 + 102004087 AGCD01062397;AGCD01062398;GBDF01011194;XM_013505442;XM_013505444 XP_013360896;XP_013360898 MODEL 8927810 protein-coding CUNH9orf43 chromosome unknown C9orf43 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955419 14067894 14086931 - 102026747 AGCD01020011;GBDF01002181;XM_013513125;XM_013513126;XM_013513127;XM_013513128;XM_013513129;XM_013513130;XM_013513132 XP_013368579;XP_013368580;XP_013368581;XP_013368582;XP_013368583;XP_013368584;XP_013368586 MODEL 8935168 protein-coding LOC102005904 uncharacterized LOC102005904 NW_004955409 26016614 26049251 + 102005904 AGCD01010148;AGCD01010149;AGCD01010150;GBDF01305671;XM_005376937 XP_005376994 MODEL 8974388 protein-coding Cep89 centrosomal protein 89 INVOLVED IN cilium assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); non-motile cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955468 4980699 5047494 + 102023250 AGCD01051930;AGCD01051931;AGCD01051932;AGCD01051933;AGCD01051934;AGCD01051935;AGCD01051936;AGCD01051937;AGCD01051938;GBBH01188165;GBDF01083691;XM_013522387 XP_013377841 MODEL 10192690 pseudo LOC102013279 Ig kappa chain V-IV region-like NW_004955470 81723 82368 + 102013279 AGCD01052599 MODEL 8837623 protein-coding Atp7a ATPase copper transporting alpha ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); blood vessel development (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anemia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955557 1355471 1515725 + 102020850 AGCD01073291;AGCD01073292;AGCD01073293;AGCD01073294;AGCD01073295;AGCD01073296;AGCD01073297;AGCD01073298;GBCB01002245;JN633747;XM_005412628;XM_005412629;XM_013508826 AEO95414;XP_005412685;XP_005412686;XP_013364280 MODEL 9007885 protein-coding Bmp1 bone morphogenetic protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN positive regulation of cartilage development (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute Otitis Media (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955403 45660591 45693724 + 102015913 AGCD01002826;GBBH01142618;GBCE01002413;XM_013513783 XP_013369237 MODEL 9035208 pseudo LOC102008897 60S ribosomal protein L36a-like NW_004955550 1877604 1877922 - 102008897 AGCD01072592 MODEL 8999214 protein-coding Ankrd42 ankyrin repeat domain 42 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleus (ortholog) NW_004955414 9351512 9395937 - 102026206 AGCD01015019;AGCD01015020;AGCD01015021;GBDF01086583;XM_005379798;XM_005379800;XM_013511792;XM_013511793;XM_013511794 XP_005379855;XP_005379857;XP_013367246;XP_013367247;XP_013367248 MODEL 8929831 ncrna LOC102004472 uncharacterized LOC102004472 NW_004955475 4433519 4450120 - 102004472 AGCD01054880;GBCE01047752;XR_263611 MODEL 8837437 pseudo LOC102007014 40S ribosomal protein S15a pseudogene NW_004955418 14137072 14137418 + 102007014 AGCD01019064 MODEL 8853156 protein-coding Clcn7 Cl-/H+ antiporter 7 INVOLVED IN response to pH (ortholog); transepithelial chloride transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant osteopetrosis 2 (ortholog); autosomal recessive osteopetrosis 4 (ortholog); FOUND IN chloride channel complex (ortholog); lysosomal membrane (ortholog) NW_004955442 15762369 15791635 + 102028022 AGCD01037878;GBDJ01175955;XM_005391549 XP_005391606 MODEL 10325970 ncrna LOC106150338 uncharacterized LOC106150338 NW_004955472 6750149 6778663 - 106150338 AGCD01053610;AGCD01053611;XR_001237088 MODEL 39134046 misc_rna 7SK 7SK RNA 8881967 ncrna LOC102010070 uncharacterized LOC102010070 NW_004955500 4830109 4994911 - 102010070 AGCD01063812;AGCD01063813;AGCD01063814;AGCD01063815;AGCD01063816;AGCD01063817;AGCD01063818;AGCD01063819;AGCD01063820;GBBH01147088;XR_001231473;XR_001231474;XR_001231475;XR_001231476;XR_001231477;XR_001231478;XR_001231479;XR_001231480;XR_001231481;XR_001231482;XR_001231483;XR_264227 MODEL 8822187 protein-coding Rraga Ras related GTP binding A ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); phosphoprotein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); GATOR1 complex (ortholog) NW_004955434 21509528 21510885 + 102025158 AGCD01032632;GBBH01032722;GBCQ01004306;XM_005388726 XP_005388783 MODEL 9024076 protein-coding Rbmx RNA binding motif protein X-linked ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); membrane protein ectodomain proteolysis (ortholog); mRNA splice site recognition (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); euchromatin (ortholog); extracellular exosome (ortholog) NW_004955489 8280842 8286252 + 102010494 AGCD01060013;GBCE01001763;XM_013504493 XP_013359947 MODEL 9033925 protein-coding Prim1 DNA primase subunit 1 ENCODES a protein that exhibits DNA-directed RNA polymerase activity (ortholog); magnesium ion binding (ortholog); ribonucleotide binding (ortholog); INVOLVED IN DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog) NW_004955458 4265500 4294329 - 102014116 AGCD01047395;AGCD01047396;AGCD01047397;AGCD01047398;AGCD01047399;AGCD01047400;GBCB01132065;GBDI01357635;XM_013520988 XP_013376442 MODEL 9028743 ncrna LOC102007371 uncharacterized LOC102007371 NW_004955546 1333455 1336205 - 102007371 AGCD01072048;GBBH01028831;XR_264889 MODEL 8829266 protein-coding Snx16 sorting nexin 16 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endosome to lysosome transport (ortholog); protein targeting to lysosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN early endosome (ortholog); endosome membrane (ortholog); late endosome (ortholog) NW_004955417 159369 209166 - 102025356 AGCD01017788;AGCD01017789;AGCD01017790;AGCD01017791;AGCD01017792;AGCD01017793;GBCB01086124;XM_005381722;XM_005381723 XP_005381779;XP_005381780 MODEL 8980265 ncrna LOC102022351 uncharacterized LOC102022351 NW_004955404 2603157 2612436 + 102022351 AGCD01003263;GBDK01427892;XR_001234596;XR_001234598;XR_001234599;XR_001234600;XR_001234602;XR_001234603;XR_001234604;XR_001234605;XR_001234606;XR_001234607;XR_001234608 MODEL 8777714 pseudo LOC102013661 cullin-5-like NW_004955444 12502917 12505534 + 102013661 AGCD01039075 MODEL 8762999 protein-coding Trmt9b tRNA methyltransferase 9B (putative) ENCODES a protein that exhibits tRNA methyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955463 4035145 4096996 - 102015816 AGCD01049600;AGCD01049601;GBDJ01298592;XM_013521538;XM_013521539;XM_013521540;XM_013521541;XM_013521542;XM_013521543;XM_013521544;XM_013521545;XM_013521546;XM_013521547;XM_013521548;XM_013521549;XM_013521550;XM_013521551;XM_013521552;XM_013521553;XM_013521554;XM_013521555;XM_013521556;XM_013521557;XM_013521558;XM_013521559 XP_013376992;XP_013376993;XP_013376994;XP_013376995;XP_013376996;XP_013376997;XP_013376998;XP_013376999;XP_013377000;XP_013377001;XP_013377002;XP_013377003;XP_013377004;XP_013377005;XP_013377006;XP_013377007;XP_013377008;XP_013377009;XP_013377010;XP_013377011;XP_013377012;XP_013377013 MODEL 9054560 protein-coding Slc34a1 solute carrier family 34 member 1 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN arsenate ion transmembrane transport (ortholog); bone remodeling (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955408 29626775 29640811 + 102024651 AGCD01008765;GBCQ01005308;XM_005376430;XM_005376431;XM_005376432;XM_005376433 XP_005376487;XP_005376488;XP_005376489;XP_005376490 MODEL 9010852 protein-coding Fgfr1op2 FGFR1 oncogene partner 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN wound healing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 21814133 21843105 + 102006561 AGCD01014267;AGCD01014268;GBDF01126930;XM_005379112;XM_005379113;XM_005379114;XM_005379115 XP_005379169;XP_005379170;XP_005379171;XP_005379172 MODEL 8989125 protein-coding LOC102009665 antileukoproteinase NW_004955445 12093023 12095345 + 102009665 AGCD01039735;GBDI01080100;XM_013518386 XP_013373840 MODEL 9022207 protein-coding Bysl bystin like INVOLVED IN blastocyst formation (ortholog); cell population proliferation (ortholog); cellular response to forskolin (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Brain Injuries (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); chromosome (ortholog) NW_004955437 8257081 8266627 + 102019200 AGCD01034483;GBDF01090288;XM_005389708 XP_005389765 MODEL 8702117 protein-coding Alg13 ALG13 UDP-N-acetylglucosaminyltransferase subunit ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); negative regulation of TORC1 signaling (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955490 4069866 4140494 - 102030323 AGCD01060180;AGCD01060181;AGCD01060182;GBCE01134171;XM_005404636;XM_005404639;XM_005404642;XM_013504527;XM_013504528;XM_013504529;XM_013504530;XM_013504531;XM_013504532;XM_013504533;XM_013504534 XP_005404693;XP_005404696;XP_005404699;XP_013359981;XP_013359982;XP_013359983;XP_013359984;XP_013359985;XP_013359986;XP_013359987;XP_013359988 MODEL 39133764 misc_rna 7SK 7SK RNA 8699899 protein-coding Acads acyl-CoA dehydrogenase short chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN butyrate catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH absence epilepsy (ortholog); alcohol use disorder (ortholog); anxiety disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955455 10928560 10942748 - 102019142 AGCD01045967;AGCD01045968;GBBH01207722;GBDF01118831;XM_013520359 XP_013375813 MODEL 9022021 protein-coding Ephb4 EPH receptor B4 ENCODES a protein that exhibits ephrin receptor activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriovenous malformation (ortholog); autistic disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955573 132328 150879 + 102012701 AGCD01074964;GBDK01146486;XM_005413688;XM_013509481 XP_005413745;XP_013364935 MODEL 8827226 protein-coding Asprv1 aspartic peptidase retroviral like 1 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); skin development (ortholog); ASSOCIATED WITH genetic disease (ortholog); ichthyosis (ortholog); Lamellar Ichthyosis, Autosomal Dominant Form (ortholog) NW_004955424 15190746 15193270 + 102012003 AGCD01024696;GBDI01226370;XM_005385633 XP_005385690 MODEL 8832479 protein-coding LOC102018270 uncharacterized LOC102018270 NW_004955465 3342697 3344495 + 102018270 AGCD01050375;GBDF01176710;XM_005398979 XP_005399036 MODEL 8978744 protein-coding Sf3a2 splicing factor 3a subunit 2 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955495 5896648 5904287 - 102016929 AGCD01062043;GBDF01008843;XM_005405914;XM_005405915 XP_005405971;XP_005405972 MODEL 8846914 protein-coding LOC102003039 zinc finger protein 14-like NW_004955499 300856 321376 + 102003039 AGCD01063215;AGCD01063216;AGCD01063217;AGCD01063218;GBDI01054273;XM_013505563;XM_013505564;XM_013505565;XM_013505566 XP_013361017;XP_013361018;XP_013361019;XP_013361020 MODEL 8813315 protein-coding Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activity (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein import into nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955491 5546097 5573866 + 102004939 AGCD01060489;AGCD01060490;GBBH01092057;GBCE01032301;XM_013504620 XP_013360074 MODEL 8904732 protein-coding Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ENCODES a protein that exhibits heparin binding (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN cellular response to parathyroid hormone stimulus (ortholog); cellular response to prostaglandin E stimulus (ortholog); cellular response to vitamin D (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basement membrane (ortholog); cytoplasmic vesicle (ortholog); extracellular matrix (ortholog) NW_004955407 26524487 26533038 - 102021627 AGCD01007530;GBDJ01129838;XM_005375601 XP_005375658 MODEL 39131497 protein-coding CD302 CD302 molecule 8893093 ncrna LOC102014009 uncharacterized LOC102014009 NW_004955406 20130414 20137527 - 102014009 AGCD01006098;GBDF01144134;XR_259501 MODEL 39131557 protein-coding APOF apolipoprotein F 8775089 protein-coding Cbarp CACN subunit beta associated regulatory protein ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport (ortholog); negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of voltage-gated calcium channel activity (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN growth cone (ortholog); plasma membrane (ortholog); secretory granule (ortholog) NW_004955495 6671719 6678338 + 102010500 AGCD01062088;GBDF01261682;GBDF01261683;XM_005405990 XP_005406047 MODEL 8872871 protein-coding LOC102012064 olfactory receptor 10C1-like NW_004955458 2337356 2338318 - 102012064 AGCD01047225;XM_005397239 XP_005397296 MODEL 39134171 misc_rna 7SK 7SK RNA 8737909 protein-coding LOC102004854 cytochrome b561 domain-containing protein 2 NW_004955532 2140745 2155258 + 102004854 AGCD01070220;GBCQ01070938;XM_005410273;XM_013507592;XM_013507593;XM_013507594;XM_013507595 XP_005410330;XP_013363046;XP_013363047;XP_013363048;XP_013363049 MODEL 8908393 pseudo LOC102013280 olfactory receptor 502-like NW_004955414 23688282 23689224 - 102013280 AGCD01015516 MODEL 39134352 misc_rna 7SK 7SK RNA 8821237 protein-coding LOC102011688 uncharacterized LOC102011688 NW_004955429 5818013 5828157 + 102011688 AGCD01028537;XM_013515350 XP_013370804 MODEL 8862922 ncrna LOC102004473 uncharacterized LOC102004473 NW_004955476 518058 533073 - 102004473 AGCD01055195;GBBH01074467;XR_001230791;XR_001230792;XR_263616 MODEL 8862196 protein-coding LOC102008527 olfactory receptor 52N4-like NW_004955414 21703835 21704818 + 102008527 AGCD01015429;XM_013511734 XP_013367188 MODEL 9018128 protein-coding Cdk2ap2 cyclin dependent kinase 2 associated protein 2 INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of microtubule cytoskeleton organization (ortholog); regulation of stem cell division (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); microtubule (ortholog); nucleus (ortholog) NW_004955422 17981267 17983480 + 102014059 AGCD01022933;GBBH01034591;XM_005384312;XM_005384313;XM_013514086 XP_005384369;XP_005384370;XP_013369540 MODEL 8908862 pseudo LOC102007015 chromobox protein homolog 3 pseudogene NW_004955419 1378119 1378641 + 102007015 AGCD01019647 MODEL 39134047 misc_rna 7SK 7SK RNA 9011044 protein-coding LOC102010856 uncharacterized LOC102010856 NW_004955650 98638 101158 + 102010856 AGCD01077799;GBDJ01149179;XM_005415052;XR_001232591 XP_005415109 MODEL 39132022 rrna 5S_rRNA 5S ribosomal RNA 8955793 protein-coding Dlx2 distal-less homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN branching morphogenesis of a nerve (ortholog); cartilage development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955449 2907502 2909893 + 102015361 AGCD01041838;GBCE01092339;XM_005393217 XP_005393274 MODEL 9034606 ncrna LOC102011689 uncharacterized LOC102011689 NW_004955511 5972095 5975480 + 102011689 AGCD01066594;XR_264436 MODEL 8965077 protein-coding Plekhf2 pleckstrin homology and FYVE domain containing 2 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); transport vesicle (ortholog) NW_004955417 11261712 11282038 + 102003868 AGCD01018128;AGCD01018129;GBDF01183993;XM_005381827 XP_005381884 MODEL 8981562 ncrna LOC102004088 uncharacterized LOC102004088 NW_004955425 20438853 20450026 + 102004088 AGCD01025731;GBCB01044195;XR_001234293 MODEL 8884637 protein-coding Il15ra interleukin 15 receptor subunit alpha ENCODES a protein that exhibits interleukin-15 receptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-15-mediated signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); interleukin-15 receptor complex (ortholog) NW_004955421 22590168 22612835 - 102009192 AGCD01022140;AGCD01022141;GBDJ01025096;XM_013513670;XM_013513671;XM_013513672 XP_013369124;XP_013369125;XP_013369126 MODEL 8965215 ncrna LOC102005907 uncharacterized LOC102005907 NW_004955410 11624781 11626736 - 102005907 AGCD01010829;GBDF01087824;XR_259837 MODEL 8975451 protein-coding Cep95 centrosomal protein 95 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); spindle pole (ortholog) NW_004955478 7337966 7366135 - 102013290 AGCD01055958;GBDF01048300;XM_005402163;XM_005402164;XM_005402165;XM_013503172 XP_005402220;XP_005402221;XP_005402222;XP_013358626 MODEL 8877881 pseudo LOC102008902 nucleolar protein 58 pseudogene NW_004955446 12111400 12115335 + 102008902 AGCD01040224;AGCD01040225 MODEL 8922317 protein-coding Bmp10 bone morphogenetic protein 10 ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adult heart development (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Fibrosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955424 16124526 16130723 + 102018743 AGCD01024738;XM_005385656 XP_005385713 MODEL 8973920 protein-coding LOC102009673 E3 ubiquitin-protein ligase UHRF1 NW_004955777 1489 17093 + 102009673 AGCD01078327;GBDF01156556;GBDF01156558;XM_005415110 XP_005415167 MODEL 9010888 protein-coding LOC102008168 vomeronasal type-1 receptor 2-like NW_004955603 429287 430189 - 102008168 AGCD01076845;XM_005414839 XP_005414896 MODEL 8922156 protein-coding Atp7b ATPase copper transporting beta ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN cellular detoxification of copper ion (ortholog); cellular response to copper ion (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); Anhaptoglobinemia (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955431 5228395 5297120 - 102005829 AGCD01030017;AGCD01030018;GBBH01116837;XM_005387611;XM_005387612;XM_005387614 XP_005387668;XP_005387669;XP_005387671 MODEL 39133765 misc_rna 7SK 7SK RNA 39133766 misc_rna 7SK 7SK RNA 8952084 pseudo LOC102007372 60S ribosomal protein L26-like NW_004955441 13050841 13051739 - 102007372 AGCD01037141 MODEL 8934830 protein-coding CUNH9orf50 chromosome unknown C9orf50 homolog FOUND IN cytoplasm (ortholog) NW_004955570 1731774 1737757 - 102020729 AGCD01074826;AGCD01074827;GBDF01046864;XM_005413629 XP_005413686 MODEL 8866538 protein-coding Sf3a3 splicing factor 3a subunit 3 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 15691729 15715782 - 102016339 AGCD01044494;AGCD01044495;GBCB01056221;XM_005395224 XP_005395281 MODEL 8825216 protein-coding Wdfy2 WD repeat and FYVE domain containing 2 INVOLVED IN positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955431 4809405 5086647 + 102030224 AGCD01030011;AGCD01030012;AGCD01030013;AGCD01030014;GBDF01161721;XM_005387605;XM_005387606;XM_005387607;XM_013515761;XM_013515762;XM_013515763;XR_261449 XP_005387662;XP_005387663;XP_005387664;XP_013371215;XP_013371216;XP_013371217 MODEL 8883496 protein-coding Prim2 DNA primase subunit 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog); nucleoplasm (ortholog) NW_004955502 2642328 2898919 - 102025706 AGCD01064302;AGCD01064303;AGCD01064304;AGCD01064305;GBDJ01401975;XM_005406880;XM_005406881;XM_013505840;XM_013505841 XP_005406937;XP_005406938;XP_013361294;XP_013361295 MODEL 8948716 pseudo LOC102013663 zinc finger protein 14 pseudogene NW_004955567 1589726 1604507 - 102013663 AGCD01074484;XM_005413380 MODEL 9002610 pseudo LOC102022352 pescadillo homolog pseudogene NW_004955404 24712579 24718093 - 102022352 AGCD01003827 MODEL 8957214 protein-coding Apof apolipoprotein F INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); triglyceride metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955458 3973734 3978312 - 102009020 AGCD01047359;GBDI01064583;GBDK01007513;XM_005397312 XP_005397369 MODEL 10108931 ncrna LOC106150339 uncharacterized LOC106150339 NW_004955472 7277848 7298260 + 106150339 AGCD01053618;GBDF01145537;XR_001237096 MODEL 8735455 protein-coding Snx17 sorting nexin 17 ENCODES a protein that exhibits low-density lipoprotein particle receptor binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955469 9334562 9340766 + 102029386 AGCD01052498;GBDI01076358;XM_005400489;XM_005400490 XP_005400546;XP_005400547 MODEL 8995041 protein-coding Fgfr2 fibroblast growth factor receptor 2 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axonogenesis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acne (ortholog); Acneiform Eruptions (ortholog); acrocephalosyndactylia (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955551 2321190 2427000 - 102016104 AGCD01072709;AGCD01072710;AGCD01072711;AGCD01072712;GBBH01063359;GBCC01015608;XM_005412181 XP_005412238 MODEL 9053466 protein-coding Trmu tRNA mitochondrial 2-thiouridylase ENCODES a protein that exhibits tRNA-5-taurinomethyluridine 2-sulfurtransferase activity (ortholog); ASSOCIATED WITH aminoglycoside-induced deafness (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 30440014 30453860 + 102012183 AGCD01014608;GBDF01131064;XM_005379512;XM_013511394;XM_013511395;XM_013511396 XP_005379569;XP_013366848;XP_013366849;XP_013366850 MODEL 8801345 protein-coding Ankrd44 ankyrin repeat domain 44 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955403 3228360 3476988 + 102015909 AGCD01001759;AGCD01001760;AGCD01001761;AGCD01001762;AGCD01001763;AGCD01001764;AGCD01001765;AGCD01001766;GBDK01056004;XM_005373269;XM_005373270;XM_013512075;XM_013512078;XM_013512080;XM_013512083;XM_013512086;XM_013512090;XM_013512095;XM_013512098;XM_013512100 XP_005373326;XP_005373327;XP_013367529;XP_013367532;XP_013367534;XP_013367537;XP_013367540;XP_013367544;XP_013367549;XP_013367552;XP_013367554 MODEL 8843804 ncrna LOC102010072 uncharacterized LOC102010072 NW_004955426 20756048 20787650 - 102010072 AGCD01026575;GBBH01059919;XR_001234330;XR_001234331;XR_001234332 MODEL 39131828 rrna 5S_rRNA 5S ribosomal RNA 9016772 protein-coding Cldn1 claudin 1 ENCODES a protein that exhibits identical protein binding (ortholog); virus receptor activity (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); calcium-independent cell-cell adhesion (ortholog); cell junction maintenance (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); atopic dermatitis (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955420 17798974 17815049 + 102016058 AGCD01021031;GBCE01004289;GBDI01009318;XM_005383227 XP_005383284 MODEL 8821648 protein-coding Acadsb acyl-CoA dehydrogenase short/branched chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); electron transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); fatty acid metabolic process (ortholog); L-isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 2-Methylbutyryl-CoA Dehydrogenase Deficiency (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955477 1177704 1213347 + 102025788 AGCD01055503;GBCB01041775;XM_005401957 XP_005402014 MODEL 8764499 protein-coding Aspscr1 ASPSCR1 tether for SLC2A4, UBX domain containing ENCODES a protein that exhibits methyltransferase regulator activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); intracellular protein transport (ortholog); regulation of D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH alveolar soft part sarcoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); intracellular protein-containing complex (ortholog) NW_004955506 1152790 1193826 - 102019825 AGCD01065247;GBDF01286847;XM_005407230;XM_005407231;XM_013506048 XP_005407287;XP_005407288;XP_013361502 MODEL 8826537 pseudo LOC102008170 40S ribosomal protein S18-like NW_004955617 165313 165780 + 102008170 AGCD01077271 MODEL 8776868 pseudo LOC102003040 peptidyl-prolyl cis-trans isomerase FKBP1A pseudogene NW_004955424 23204844 23205245 + 102003040 AGCD01025009 MODEL 8892963 protein-coding Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif 10 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955563 861355 878633 + 102008780 AGCD01074094;GBCE01095643;GBDI01262621;XM_005413109 XP_005413166 MODEL 8744904 ncrna LOC102014010 uncharacterized LOC102014010 NW_004955407 2961065 2985825 - 102014010 AGCD01006845;AGCD01006846;AGCD01006847;AGCD01006848;XR_259544 MODEL 8744935 protein-coding Cd320 CD320 molecule ENCODES a protein that exhibits calcium ion binding (ortholog); cargo receptor activity (ortholog); cobalamin binding (ortholog); INVOLVED IN B cell costimulation (ortholog); cobalamin transport (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); methylmalonic acidemia due to transcobalamin receptor defect (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955563 1084523 1089395 + 102015784 AGCD01074112;GBBH01139570;XM_005413134;XM_013509154 XP_005413191;XP_013364608 MODEL 8772615 pseudo LOC102012067 high mobility group protein B1 pseudogene NW_004955409 17116938 17117921 - 102012067 AGCD01009766;XR_259785 MODEL 8864627 ncrna LOC102004091 uncharacterized LOC102004091 NW_004955427 3205789 3215694 + 102004091 AGCD01026926;AGCD01026927;GBDF01288983;XR_001234360 MODEL 39134172 misc_rna 7SK 7SK RNA 8894866 protein-coding Slc34a2 solute carrier family 34 member 2 ENCODES a protein that exhibits phosphate ion binding (ortholog); protein domain specific binding (ortholog); sodium ion binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); intracellular phosphate ion homeostasis (ortholog); phosphate ion transport (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955443 19452373 19467129 - 102019967 AGCD01038626;GBBH01022814;GBDF01193795;XM_013518107 XP_013373561 MODEL 8815291 protein-coding Il16 interleukin 16 ENCODES a protein that exhibits CD4 receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN induction of positive chemotaxis (ortholog); leukocyte chemotaxis (ortholog); positive regulation of inflammatory response (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); borna disease (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog) NW_004955416 11876317 11987548 + 102023029 AGCD01017193;AGCD01017194;AGCD01017195;AGCD01017196;GBDI01361041;XM_005381442;XM_005381443;XM_005381444;XM_005381449 XP_005381499;XP_005381500;XP_005381501;XP_005381506 MODEL 8913231 pseudo LOC102004858 KATNB1-like protein 1 pseudogene NW_004955439 1794420 1798798 + 102004858 AGCD01035627 MODEL 8958915 protein-coding Cbfa2t2 CBFA2/RUNX1 partner transcriptional co-repressor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); intestinal epithelial cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955422 27671215 27809384 - 102027869 AGCD01023331;AGCD01023332;AGCD01023333;AGCD01023334;AGCD01023335;GBCB01131430;XM_005384841;XM_005384842;XM_013514210 XP_005384898;XP_005384899;XP_013369664 MODEL 8732258 pseudo LOC102013281 40S ribosomal protein SA pseudogene NW_004955472 1342714 1343590 + 102013281 AGCD01053388 MODEL 39134353 misc_rna 7SK 7SK RNA 8729091 pseudo LOC102018271 60S ribosomal protein L9-like NW_004955412 17709908 17710500 + 102018271 AGCD01012916 MODEL 8866355 pseudo LOC102009680 60S ribosomal protein L13a pseudogene NW_004955452 571667 572274 - 102009680 AGCD01043817;AGCD01043818 MODEL 8708155 protein-coding Rragb Ras related GTP binding B ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); GTPase binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to leucine starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Gtr1-Gtr2 GTPase complex (ortholog); lysosomal membrane (ortholog) NW_004955475 2662969 2692253 + 102026858 AGCD01054817;GBBH01019101;XM_005401539;XM_005401540;XM_013502883 XP_005401596;XP_005401597;XP_013358337 MODEL 8979085 protein-coding LOC102004474 protocadherin beta-2-like NW_004955415 12721832 12776585 - 102004474 AGCD01016225;AGCD01016226;AGCD01016227;AGCD01016228;AGCD01016229;AGCD01016230;AGCD01016231;GBDF01153219;GBDK01431475;XM_013512255 XP_013367709 MODEL 10285507 protein-coding Alg14 ALG14 UDP-N-acetylglucosaminyltransferase subunit ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 15 (ortholog); congenital myopathy (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); UDP-N-acetylglucosamine transferase complex (ortholog) NW_004955435 162570 273924 - 106146266 AGCD01032715;AGCD01032716;AGCD01032717;AGCD01032718;AGCD01032719;AGCD01032720;GBDK01276824;XM_013516477;XM_013516478;XM_013516479;XM_013516480;XM_013516481 XP_013371931;XP_013371932;XP_013371933;XP_013371934;XP_013371935 MODEL 8818566 pseudo LOC102008528 density-regulated protein pseudogene NW_004955415 15527746 15528569 + 102008528 AGCD01016348 MODEL 8748679 protein-coding ATP8 ATP synthase F0 subunit 8 MT 7771 7974 + 15822228 JX312692 AFQ55781;YP_008080749 REVIEWED 8706411 protein-coding Cdk3 cyclin dependent kinase 3 INVOLVED IN DNA damage response (ortholog); G0 to G1 transition (ortholog); negative regulation of Notch signaling pathway (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955506 6247146 6252083 - 102006371 AGCD01065405;GBDF01210937;XM_005407460;XM_005407461;XM_005407462;XM_005407463 XP_005407517;XP_005407518;XP_005407519;XP_005407520 MODEL 39134048 misc_rna 7SK 7SK RNA 39132024 rrna 5S_rRNA 5S ribosomal RNA 8845043 protein-coding Dlx3 distal-less homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN blood vessel development (ortholog); BMP signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 4 (ortholog); ectodermal dysplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 11635027 11640091 + 102017293 AGCD01043360;AGCD01043361;GBCE01085065;XM_005394184 XP_005394241 MODEL 8745406 protein-coding Plekhg1 pleckstrin homology and RhoGEF domain containing G1 ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955439 10636444 10755814 - 102004645 AGCD01035887;GBCE01021171;XM_005390587;XM_013517387;XM_013517388 XP_005390644;XP_013372841;XP_013372842 MODEL 8831095 protein-coding Bzw1 basic leucine zipper and W2 domains 1 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955403 676384 688353 - 102003303 AGCD01001704;AGCD01001705;GBDF01009056;XM_005373238;XM_013511843 XP_005373295;XP_013367297 MODEL 9063620 ncrna LOC102005908 uncharacterized LOC102005908 NW_004955410 34743414 34763395 - 102005908 AGCD01011404;GBDF01221838;XR_001232718 MODEL 8803459 protein-coding Rbmx2 RNA binding motif protein X-linked 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nuclear membrane (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955473 4654257 4664419 - 102006339 AGCD01053954;GBDF01075377;XM_005401234 XP_005401291 MODEL 9064359 protein-coding LOC102008903 prolactin-like NW_004955576 90664 96906 - 102008903 AGCD01075255;XM_005413945 XP_005414002 MODEL 8866156 protein-coding Cep97 centrosomal protein 97 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) NW_004955427 3227130 3247062 + 102029880 AGCD01026929;AGCD01026930;GBBH01127224;XM_005386326;XM_005386327;XM_005386328;XM_005386329;XM_005386331;XM_013515080;XR_261225 XP_005386383;XP_005386384;XP_005386385;XP_005386386;XP_005386388;XP_013370534 MODEL 8868943 protein-coding Snx18 sorting nexin 18 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colorectal cancer (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955446 13043821 13067933 - 102014096 AGCD01040245;GBDJ01129277;XM_005392757 XP_005392814 MODEL 9065689 protein-coding Fgfr3 fibroblast growth factor receptor 3 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); axonogenesis involved in innervation (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); absence epilepsy (ortholog); acanthosis nigricans (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955514 1030244 1038590 + 102017151 AGCD01067032;GBCE01053787;GBCE01053789;XM_013506763 XP_013362217 MODEL 9003709 protein-coding Acadvl acyl-CoA dehydrogenase very long chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); fatty-acyl-CoA binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); atrial heart septal defect (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrial nucleoid (ortholog) NW_004955467 9684070 9689454 - 102003329 AGCD01051521;GBDI01062741;XM_013522095 XP_013377549 MODEL 8925580 ncrna LOC102013282 uncharacterized LOC102013282 NW_004955415 3826712 3849145 + 102013282 AGCD01015954;AGCD01015955;AGCD01015956;XR_001233214;XR_260262 MODEL 8728037 protein-coding Ephb6 EPH receptor B6 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); SH2 domain binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); positive regulation of T cell costimulation (ortholog); T cell mediated immunity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog) NW_004955494 812482 820679 + 102003560 AGCD01061385;GBDF01008198;XM_005405381;XM_005405383;XM_013505009;XM_013505010;XM_013505011;XM_013505012 XP_005405438;XP_005405440;XP_013360463;XP_013360464;XP_013360465;XP_013360466 MODEL 39131830 rrna 5S_rRNA 5S ribosomal RNA 9041715 protein-coding LOC102010858 heterogeneous nuclear ribonucleoprotein U-like protein 2 NW_004957878 562 1192 + 102010858 AGCD01081274;XM_005415235 XP_005415292 MODEL 9016095 ncrna LOC102011691 uncharacterized LOC102011691 NW_004955432 22073703 22077752 + 102011691 AGCD01031246;GBDF01194467;XR_001234645 MODEL 8926719 protein-coding Agbl1 AGBL carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Corneal Dystrophy, Fuchs Endothelial, 8 (ortholog) NW_004955416 17885757 18686124 - 102011442 AGCD01017393;AGCD01017394;AGCD01017395;AGCD01017396;AGCD01017397;AGCD01017398;AGCD01017399;AGCD01017400;AGCD01017401;AGCD01017402;AGCD01017403;AGCD01017404;AGCD01017405;AGCD01017406;AGCD01017407;AGCD01017408;AGCD01017409;AGCD01017410;GBDI01046647;XM_005381584;XM_005381585;XM_013512654 XP_005381641;XP_005381642;XP_013368108 MODEL 8756323 protein-coding Alg2 ALG2 alpha-1,3/1,6-mannosyltransferase ENCODES a protein that exhibits alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); axonal neuropathy (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955419 26423243 26427384 + 102015523 AGCD01020408;GBCQ01093153;XM_005382821 XP_005382878 MODEL 8989267 protein-coding LOC102013665 vomeronasal type-1 receptor 4-like NW_004955569 770136 772991 - 102013665 AGCD01074614;XM_013509361 XP_013364815 MODEL 8907619 protein-coding Cdk4 cyclin dependent kinase 4 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to interleukin-4 (ortholog); cellular response to ionomycin (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Brain Neoplasms (ortholog); Brain Stem Neoplasms (ortholog); FOUND IN bicellular tight junction (ortholog); chromatin (ortholog); cyclin D1-CDK4 complex (ortholog) NW_004955458 5457927 5460718 - 102011281 AGCD01047493;GBCB01056209;XM_005397414 XP_005397471 MODEL 8756856 protein-coding CUNH9orf78 chromosome unknown C9orf78 homolog ENCODES a protein that exhibits U5 snRNA binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); regulation of homologous chromosome segregation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955513 38060 43450 - 102013111 AGCD01066810;GBDJ01089128;XM_005408332;XM_013506705 XP_005408389;XP_013362159 MODEL 8810905 ncrna LOC102022353 uncharacterized LOC102022353 NW_004955453 10850833 10853572 - 102022353 AGCD01044791;GBDF01234833;XR_001236148;XR_262727 MODEL 8947834 protein-coding Sf3b1 splicing factor 3b subunit 1 ENCODES a protein that exhibits chromatin binding (ortholog); pre-mRNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN B-WICH complex (ortholog); catalytic step 2 spliceosome (ortholog); chromatin (ortholog) NW_004955403 3134960 3163395 + 102025074 AGCD01001754;GBCC01000595;XM_005373873 XP_005373930 MODEL 8931473 protein-coding Apoh apolipoprotein H ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); lipid binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); blood coagulation, intrinsic pathway (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH antiphospholipid syndrome (ortholog); arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular region (ortholog) NW_004955478 5612258 5626061 - 102007763 AGCD01055880;GBDJ01386248;XM_005402147 XP_005402204 MODEL 8873020 protein-coding Bmp15 bone morphogenetic protein 15 INVOLVED IN ovarian cumulus expansion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955543 2304112 2345376 + 102018029 AGCD01071649;AGCD01071650;GBCE01042542;XM_005411357;XM_005411359;XM_005411360;XM_013508137;XM_013508138;XM_013508139;XM_013508140 XP_005411414;XP_005411416;XP_005411417;XP_013363591;XP_013363592;XP_013363593;XP_013363594 MODEL 10122181 ncrna LOC106150340 uncharacterized LOC106150340 NW_004955472 1973576 1976345 - 106150340 AGCD01053425;GBDF01118125;XR_001237097 MODEL 8735588 trna trnA(tgc) tRNA-Ala MT 5014 5083 - 15822221 9016048 pseudo LOC102010073 nef-associated protein 1 pseudogene NW_004955503 3250978 3252092 - 102010073 AGCD01064620 MODEL 8790733 protein-coding LOC102018274 Wilms tumor protein 1-interacting protein-like NW_004955466 5534404 5550454 - 102018274 AGCD01050882;GBDF01040845;XM_013521879 XP_013377333 MODEL 39133767 misc_rna 7SK 7SK RNA 9061206 protein-coding Il17a interleukin 17A ENCODES a protein that exhibits cytokine activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); cellular response to interleukin-1 (ortholog); defense response to fungus (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acne (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955411 5896435 5899911 - 102029486 AGCD01011666;GBDF01098022;XM_005377658 XP_005377715 MODEL 8766207 ncrna LOC102007380 uncharacterized LOC102007380 NW_004955445 17614758 17619898 - 102007380 AGCD01039895;GBDF01145045;XR_262349 MODEL 8873610 protein-coding LOC102008171 exonuclease 3'-5' domain-containing protein 1-like NW_004956095 1189 6900 - 102008171 AGCD01079041;AGCD01079042;AGCD01079043;GBDJ01296153;GBDK01051647;XM_005415168 XP_005415225 MODEL 9025291 protein-coding LOC102014016 olfactory receptor 6C1 NW_004955458 2523219 2524157 - 102014016 AGCD01047237;XM_005397243 XP_005397300 MODEL 8919326 protein-coding Wdfy3 WD repeat and FYVE domain containing 3 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN aggrephagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) NW_004955474 4764902 5045421 + 102025904 AGCD01054386;AGCD01054387;AGCD01054388;AGCD01054389;AGCD01054390;AGCD01054391;AGCD01054392;GBDK01190489;XM_005401374;XM_013502725;XM_013502726;XM_013502727;XM_013502728;XM_013502729;XM_013502730 XP_005401431;XP_013358179;XP_013358180;XP_013358181;XP_013358182;XP_013358183;XP_013358184 MODEL 8881749 protein-coding Cd34 CD34 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); sulfate binding (ortholog); INVOLVED IN cell motility (ortholog); cell-cell adhesion (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); diabetic retinopathy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); cell periphery (ortholog) NW_004955406 43116688 43130405 - 102007734 AGCD01006725;GBBH01118869;GBDK01134864;XM_005375443 XP_005375500 MODEL 8711859 ncrna LOC102004093 uncharacterized LOC102004093 NW_004955506 3778930 3780204 - 102004093 AGCD01065319;GBDF01208779;XR_264347 MODEL 39134354 misc_rna 7SK 7SK RNA 9041612 protein-coding Ankrd45 ankyrin repeat domain 45 INVOLVED IN cell population proliferation (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); thymoma (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 13842571 13882625 - 102007295 AGCD01005954;GBDF01308215;XM_005374871 XP_005374928 MODEL 8724588 protein-coding LOC102007016 2'-5'-oligoadenylate synthase 1-like NW_004955482 9316087 9321788 + 102007016 AGCD01057564;AGCD01057565;GBBH01096422;GBDI01244956;XM_013503740 XP_013359194 MODEL 8860097 ncrna LOC102009682 uncharacterized LOC102009682 NW_004955453 7009688 7017214 + 102009682 AGCD01044736;XR_001236192 MODEL 8828891 protein-coding Acan aggrecan ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN cartilage condensation (ortholog); cellular response to growth factor stimulus (ortholog); chondroblast differentiation (ortholog); ASSOCIATED WITH achondroplasia (ortholog); Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955416 16125536 16186046 - 102015842 AGCD01017350;AGCD01017351;GBCE01089460;XM_005381703 XP_005381760 MODEL 9050992 protein-coding Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN granulocyte differentiation (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN Golgi membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955541 2724369 2777540 - 102006822 AGCD01071423;AGCD01071424;GBDK01281937;XM_005411026;XM_005411029;XM_005411030;XM_013508004;XM_013508006 XP_005411083;XP_005411086;XP_005411087;XP_013363458;XP_013363460 MODEL 9030957 pseudo LOC102004476 uncharacterized LOC102004476 NW_004955476 7152638 7163867 + 102004476 AGCD01055347 MODEL 8824205 protein-coding Ass1 argininosuccinate synthase 1 ENCODES a protein that exhibits amino acid binding (ortholog); argininosuccinate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acute-phase response (ortholog); cellular response to amine stimulus (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); FOUND IN cell body fiber (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955513 443372 485190 + 102015877 AGCD01066826;GBCQ01008334;XM_005408343 XP_005408400 MODEL 8967982 protein-coding LOC102003044 olfactory receptor 8K3-like NW_004955511 1368604 1369545 + 102003044 AGCD01066365;XM_005407956 XP_005408013 MODEL 8900587 protein-coding LOC102008531 BRCA1-A complex subunit RAP80-like NW_004955417 1529837 1666641 - 102008531 AGCD01017837;AGCD01017838;AGCD01017839;AGCD01017840;AGCD01017841;AGCD01017842;AGCD01017843;AGCD01017844;XM_013512696 XP_013368150 MODEL 39134049 misc_rna 7SK 7SK RNA 39132025 rrna 5S_rRNA 5S ribosomal RNA 8937886 protein-coding Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); cellular response to BMP stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955426 19146288 19471880 - 102027205 AGCD01026540;AGCD01026541;AGCD01026542;AGCD01026543;AGCD01026544;AGCD01026545;AGCD01026546;AGCD01026547;GBDJ01062082;XM_005386164 XP_005386221 MODEL 8823307 pseudo LOC102012068 ribose-phosphate pyrophosphokinase 1-like NW_004955409 26469788 26470881 - 102012068 AGCD01010186 MODEL 39134173 misc_rna 7SK 7SK RNA 8971175 protein-coding Bzw2 basic leucine zipper and W2 domains 2 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955410 19833008 19874647 + 102022680 AGCD01011031;GBDI01063049;XM_005377337 XP_005377394 MODEL 9012823 protein-coding Plekhg2 pleckstrin homology and RhoGEF domain containing G2 INVOLVED IN regulation of actin filament polymerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955468 138262 149480 - 102022068 AGCD01051683;AGCD01051684;GBBH01065682;XM_013522376 XP_013377830 MODEL 8958561 pseudo LOC102013666 transmembrane 9 superfamily member 3-like NW_004955581 227506 229739 + 102013666 AGCD01075662 MODEL 8777412 ncrna LOC102004861 uncharacterized LOC102004861 NW_004955553 760578 769863 + 102004861 AGCD01072863;AGCD01072864;GBDF01279699;XR_001232281;XR_264931 MODEL 8746222 protein-coding Slc34a3 solute carrier family 34 member 3 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); INVOLVED IN intracellular phosphate ion homeostasis (ortholog); phosphate ion transport (ortholog); response to magnesium ion (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH anal canal squamous cell carcinoma (ortholog); arthritis (ortholog); asthma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955513 5228575 5233501 + 102010720 AGCD01066963;GBCQ01002877;XM_005408605;XM_005408606 XP_005408662;XP_005408663 MODEL 9040250 ncrna LOC102008904 uncharacterized LOC102008904 NW_004955580 1286792 1287412 - 102008904 AGCD01075652;GBDK01422065;XR_265090 MODEL 8741885 protein-coding Snx19 sorting nexin 19 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); dense core granule maturation (ortholog); insulin secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); early endosome membrane (ortholog) NW_004955412 31747519 31791022 - 102024441 AGCD01013343;AGCD01013344;AGCD01013345;GBDK01128502;XM_005378570;XM_005378571;XM_005378572;XM_013511227 XP_005378627;XP_005378628;XP_005378629;XP_013366681 MODEL 8901851 pseudo LOC102011694 casein kinase I NW_004955434 9624730 9625478 - 102011694 AGCD01032306;XR_261649 MODEL 8847035 protein-coding Cd36 CD36 molecule (CD36 blood group) ENCODES a protein that exhibits amyloid-beta binding (ortholog); cargo receptor activity (ortholog); high-density lipoprotein particle binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955410 5003720 5120903 - 102005118 AGCD01010674;AGCD01010675;AGCD01010676;AGCD01010677;AGCD01010678;AGCD01010679;AGCD01010680;GBBH01165788;XM_005377198;XM_005377199;XM_005377200;XM_005377201;XM_013510592 XP_005377255;XP_005377256;XP_005377257;XP_005377258;XP_013366046 MODEL 8986311 protein-coding Rbmxl2 RBMX like 2 FOUND IN nucleus (ortholog) NW_004955414 22919632 22921150 + 102015005 AGCD01015485;AGCD01015486;GBDF01083890;XM_005380515 XP_005380572 MODEL 8974542 trna Trnaa-agc transfer RNA alanine (anticodon AGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978814 AGCD01022921;AGCD01037757;AGCD01039088;AGCD01050627;AGCD01050631;AGCD01052488;AGCD01057602;AGCD01057606;AGCD01058153 MODEL 9037806 protein-coding Rragc Ras related GTP binding C ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); Gtr1-Gtr2 GTPase complex (ortholog) NW_004955452 16469426 16486336 - 102019769 AGCD01044512;AGCD01044513;GBDI01180443;XM_005395231 XP_005395288 MODEL 39131831 rrna 5S_rRNA 5S ribosomal RNA 8962794 pseudo LOC102018283 RNA-binding protein 34 pseudogene NW_004955475 9524183 9525658 + 102018283 AGCD01055068 MODEL 8820256 protein-coding Atp8a1 ATPase phospholipid transporting 8A1 ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylserine flippase activity (ortholog); phosphatidylserine floppase activity (ortholog); INVOLVED IN aminophospholipid translocation (ortholog); learning (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endomembrane system (ortholog); endoplasmic reticulum (ortholog) NW_004955443 5142049 5362031 + 102007946 AGCD01038232;AGCD01038233;AGCD01038234;AGCD01038235;AGCD01038236;GBCE01062282;XM_005391917;XM_005391918;XM_005391919;XM_005391920 XP_005391974;XP_005391975;XP_005391976;XP_005391977 MODEL 8816416 ncrna LOC102005909 uncharacterized LOC102005909 NW_004955411 1623772 1628626 - 102005909 AGCD01011485;GBDF01224028;XR_001232783;XR_259911 MODEL 10265533 protein-coding Prima1 proline rich membrane anchor 1 ENCODES a protein that exhibits enzyme binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) NW_004955438 15835641 15903484 - 106149170 AGCD01035385;AGCD01035386;AGCD01035387;AGCD01035388;GBDI01385092;GBDJ01044136;XM_013517273 XP_013372727 MODEL 8910531 protein-coding Agbl3 AGBL carboxypeptidase 3 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); lymphoma (ortholog) NW_004955494 7497964 7570137 - 102015734 AGCD01061553;GBCE01111503;XM_005405496;XM_013504930;XM_013504931;XM_013504932;XM_013504933;XM_013504934;XM_013504935;XM_013504936;XM_013504937;XM_013504938 XP_005405553;XP_013360384;XP_013360385;XP_013360386;XP_013360387;XP_013360388;XP_013360389;XP_013360390;XP_013360391;XP_013360392 MODEL 8799422 protein-coding Alg3 ALG3 alpha-1,3- mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Id (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955420 23236686 23241936 + 102024119 AGCD01021237;GBDF01227510;XM_005383337 XP_005383394 MODEL 8752753 protein-coding Cdk5 cyclin dependent kinase 5 ENCODES a protein that exhibits acetylcholine receptor activator activity (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); associative learning (ortholog); axonogenesis (ortholog); PARTICIPATES IN dopamine signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; Reelin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN axon (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog) NW_004955491 5491744 5497280 - 102029980 AGCD01060484;GBCQ01012005;XM_005404808 XP_005404865 MODEL 10222185 ncrna LOC106150341 uncharacterized LOC106150341 NW_004955472 12842352 12849040 - 106150341 AGCD01053821;GBDI01202999;XR_001237099;XR_001237100 MODEL 8998229 protein-coding CUNH9orf85 chromosome unknown C9orf85 homolog ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955434 1208236 1261788 - 102020156 AGCD01032059;GBDK01324388;XM_005388520;XM_013516345 XP_005388577;XP_013371799 MODEL 8849227 protein-coding Fgfr4 fibroblast growth factor receptor 4 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN cell-cell junction (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955408 29370480 29383531 + 102019778 AGCD01008753;AGCD01008754;GBCQ01129403;XM_005376410;XM_005376412;XM_005376413;XM_005376414 XP_005376467;XP_005376469;XP_005376470;XP_005376471 MODEL 9012846 pseudo LOC102022354 phospholipase DDHD2-like NW_004955454 3950247 3952158 + 102022354 AGCD01045106 MODEL 8880958 protein-coding Apold1 apolipoprotein L domain containing 1 INVOLVED IN angiogenesis (ortholog); autophagosome-dependent secretion (ortholog); endothelial cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bleeding Disorder, Vascular-Type (ortholog); Breast Cancer, Familial (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); nucleoplasm (ortholog) NW_004955413 9682032 9685965 + 102029385 AGCD01013909;AGCD01013910;GBBH01192964;XM_005379640 XP_005379697 MODEL 8924655 protein-coding Bmp2 bone morphogenetic protein 2 ENCODES a protein that exhibits BMP receptor binding (ortholog); co-receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve development (ortholog); atrioventricular canal morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); atrial heart septal defect 1 (ortholog); bone disease (ortholog); FOUND IN BMP receptor complex (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955415 17048374 17058172 + 102018921 AGCD01016408;XM_005380857 XP_005380914 MODEL 9005810 protein-coding Cldn10 claudin 10 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955404 14483217 14597912 - 102023974 AGCD01003509;AGCD01003510;AGCD01003511;AGCD01003512;AGCD01003513;AGCD01003514;AGCD01003515;AGCD01003516;GBBH01139843;XM_005374102;XM_005374103 XP_005374159;XP_005374160 MODEL 39134355 misc_rna 7SK 7SK RNA 9027756 pseudo LOC102013284 histone deacetylase 1 pseudogene NW_004955474 8472117 8474602 + 102013284 AGCD01054554 MODEL 8793979 pseudo LOC102009690 olfactory receptor 1361-like NW_004955408 1614860 1615787 + 102009690 AGCD01007967 MODEL 8806556 protein-coding LOC102010861 chromosome unknown open reading frame, human C1orf94 INVOLVED IN intracellular protein localization (ortholog); mRNA destabilization (ortholog); single fertilization (ortholog); ASSOCIATED WITH testicular germ cell cancer (ortholog); Testicular Germ Cell Tumor (ortholog); uterine carcinosarcoma (ortholog) NW_004955452 12288967 12325948 + 102010861 AGCD01044350;GBDF01048888;XM_005395119;XM_005395120;XM_005395121 XP_005395176;XP_005395177;XP_005395178 MODEL 39133768 misc_rna 7SK 7SK RNA 39134356 misc_rna 7SK 7SK RNA 8833961 protein-coding Dlx4 distal-less homeobox 4 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); melanoma (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 11652249 11660083 - 102017833 AGCD01043362;GBCE01057103;XM_005394185;XM_005394186;XM_005394187;XM_013519108;XM_013519109 XP_005394242;XP_005394243;XP_005394244;XP_013374562;XP_013374563 MODEL 8935942 protein-coding Sf3b2 splicing factor 3b subunit 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955422 19242041 19266479 - 102020130 AGCD01022989;AGCD01022990;GBBH01033396;GBDF01043546;XM_005384431 XP_005384488 MODEL 9026820 protein-coding LOC102007382 cytochrome P450 3A9-like NW_004955573 1366578 1409840 + 102007382 AGCD01075045;AGCD01075046;AGCD01075047;AGCD01075048;GBDI01323456;XM_005413769;XM_005413770 XP_005413826;XP_005413827 MODEL 8937592 protein-coding LOC102014024 glutathione S-transferase A4-like NW_004955411 3100067 3123039 + 102014024 AGCD01011538;GBCB01001165;XM_005377614;XM_005377615;XM_013510922;XM_013510923 XP_005377671;XP_005377672;XP_013366376;XP_013366377 MODEL 39132026 rrna 5S_rRNA 5S ribosomal RNA 39134174 misc_rna 7SK 7SK RNA 8942995 ncrna LOC102012069 uncharacterized LOC102012069 NW_004955410 7679839 7699275 + 102012069 AGCD01010721;AGCD01010722;GBCE01185810;XR_259825 MODEL 9000032 ncrna LOC102004095 uncharacterized LOC102004095 NW_004955507 3788141 3791465 + 102004095 AGCD01065637;GBBH01163274;XR_001231638 MODEL 8835773 protein-coding Cept1 choline/ethanolamine phosphotransferase 1 ENCODES a protein that exhibits 1-alkenyl-2-acylglycerol choline phosphotransferase activity (ortholog); diacylglycerol cholinephosphotransferase activity (ortholog); ethanolaminephosphotransferase activity (ortholog); INVOLVED IN phosphatidylcholine biosynthetic process (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955435 14704269 14743765 + 102022221 AGCD01033249;GBCQ01062983;XM_005388936;XM_005388937 XP_005388993;XP_005388994 MODEL 8936139 protein-coding Wdfy4 WDFY family member 4 INVOLVED IN antigen processing and presentation (ortholog); CD8-positive, alpha-beta T cell activation (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955556 1178970 1421139 - 102004981 AGCD01073187;AGCD01073188;AGCD01073189;AGCD01073190;AGCD01073191;AGCD01073192;AGCD01073193;AGCD01073194;GBDK01194697;XM_013508790;XM_013508791;XM_013508792;XM_013508793;XM_013508794;XM_013508795;XM_013508796;XM_013508797;XM_013508798 XP_013364244;XP_013364245;XP_013364246;XP_013364247;XP_013364248;XP_013364249;XP_013364250;XP_013364251;XP_013364252 MODEL 9067512 ncrna LOC102013667 uncharacterized LOC102013667 NW_004955583 509021 511236 - 102013667 AGCD01075831;GBDK01419162;XR_001232499;XR_265094 MODEL 8788127 protein-coding Plekhg3 pleckstrin homology and RhoGEF domain containing G3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN regulation of cell migration (ortholog); regulation of establishment of cell polarity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955466 5172603 5212518 - 102026957 AGCD01050868;AGCD01050869;GBBH01091213;XM_013521957;XM_013521958;XM_013521959;XM_013521960;XM_013521961;XM_013521963;XM_013521964 XP_013377411;XP_013377412;XP_013377413;XP_013377414;XP_013377415;XP_013377417;XP_013377418 MODEL 9040258 pseudo LOC102010074 mortality factor 4-like protein 1 pseudogene NW_004955427 22903386 22904350 - 102010074 AGCD01027478 MODEL 8990784 pseudo LOC102008909 lupus La protein homolog pseudogene NW_004955402 62999061 63000015 - 102008909 AGCD01001651 MODEL 8743980 protein-coding Ephx1 epoxide hydrolase 1 ENCODES a protein that exhibits cis-stilbene-oxide hydrolase activity (ortholog); enzyme binding (ortholog); epoxide hydrolase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cellular response to glucocorticoid stimulus (ortholog); diol biosynthetic process (ortholog); PARTICIPATES IN carbamazepine pharmacokinetics pathway; phenytoin pharmacodynamics pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN membrane (ortholog) NW_004955520 116363 142983 - 102004192 AGCD01068006;AGCD01068007;AGCD01068008;GBBH01000987;GBDI01022276;XM_013507052 XP_013362506 MODEL 8863979 protein-coding LOC102011696 butyrophilin-like protein 8 NW_004955530 347486 352064 - 102011696 AGCD01069846;GBDF01142616;XM_013507548 XP_013363002 MODEL 8711121 protein-coding Aste1 asteroid structure-specific endonuclease 1 ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); single-stranded DNA endonuclease activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Lynch syndrome (ortholog); mismatch repair cancer syndrome (ortholog) NW_004955501 7373713 7383092 + 102011561 AGCD01064214;GBDF01225117;XM_013505735;XR_001231517;XR_001231518 XP_013361189 MODEL 8742146 pseudo LOC102013288 T-cell activation inhibitor, mitochondrial-like NW_004955415 31054123 31073082 + 102013288 AGCD01016669 MODEL 8802036 protein-coding Snx2 sorting nexin 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN lamellipodium morphogenesis (ortholog); retrograde transport, endosome to Golgi (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955521 870469 934112 + 102009868 AGCD01068154;AGCD01068155;AGCD01068156;AGCD01068157;AGCD01068158;AGCD01068159;AGCD01068160;AGCD01068161;GBCE01029530;XM_005409303 XP_005409360 MODEL 8881021 protein-coding LOC102008175 translation initiation factor IF-2-like NW_004955451 5786082 5786923 - 102008175 AGCD01043175;GBCQ01165193;GBDJ01098516;XM_013519403 XP_013374857 MODEL 8845998 protein-coding Il17b interleukin 17B ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Keratoconus 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955415 5037270 5047405 + 102024451 AGCD01015989;GBBH01011723;XM_005380607;XM_005380608;XM_005380609;XM_005380610;XM_005380611;XM_013512106;XM_013512107 XP_005380664;XP_005380665;XP_005380666;XP_005380667;XP_005380668;XP_013367560;XP_013367561 MODEL 8962137 protein-coding Cd37 CD37 molecule INVOLVED IN defense response to protozoan (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of myeloid dendritic cell activation (ortholog); FOUND IN immunological synapse (ortholog); plasma membrane (ortholog) NW_004955559 1465937 1471249 - 102019211 AGCD01073646;GBDF01085900;XM_013509054;XM_013509055;XM_013509056;XM_013509057;XM_013509058 XP_013364508;XP_013364509;XP_013364510;XP_013364511;XP_013364512 MODEL 8799998 protein-coding Acap1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955467 9568455 9583279 - 102018582 AGCD01051518;AGCD01051519;GBDI01062258;XM_005399511;XM_013522119;XR_001236859 XP_005399568;XP_013377573 MODEL 39131832 rrna 5S_rRNA 5S ribosomal RNA 8874235 trna Trnaa-cgc transfer RNA alanine (anticodon CGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955419;NW_004955449 326792;20242611;16876672 326863;20242682;16876743 -;-;- 101978817 AGCD01020232;AGCD01042230;AGCD01057606 MODEL 8883673 protein-coding Rragd Ras related GTP binding D ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); cellular response to leucine starvation (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); Gtr1-Gtr2 GTPase complex (ortholog); lysosomal membrane (ortholog) NW_004955411 16111931 16155662 - 102006554 AGCD01011966;AGCD01011967;GBDJ01225532;XM_013510716 XP_013366170 MODEL 8885614 pseudo LOC102010862 E3 ubiquitin-protein ligase TRIM23 pseudogene NW_004955405 30595460 30597274 + 102010862 AGCD01005276 MODEL 9055775 protein-coding Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atypical hemolytic-uremic syndrome (ortholog); autoimmune thrombocytopenic purpura (ortholog); FOUND IN extracellular region (ortholog) NW_004955513 2761386 2786447 + 102017596 AGCD01066889;AGCD01066890;GBCQ01185243;XM_013506558;XM_013506559;XM_013506560;XM_013506561 XP_013362012;XP_013362013;XP_013362014;XP_013362015 MODEL 8994292 protein-coding Ankrd46 ankyrin repeat domain 46 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955417 15740108 15750627 - 102017771 AGCD01018241;GBDK01143312;XM_013512830;XM_013512831;XM_013512832 XP_013368284;XP_013368285;XP_013368286 MODEL 8873518 pseudo LOC102004478 beta-galactosidase-like NW_004955416 3761907 3786720 + 102004478 AGCD01016876 MODEL 10085714 ncrna LOC106150342 uncharacterized LOC106150342 NW_004955472 2673390 2679087 + 106150342 AGCD01053482;AGCD01053483;GBDI01215196;XR_001237103 MODEL 8820774 protein-coding Slc35a1 solute carrier family 35 member A1 ENCODES a protein that exhibits antiporter activity (ortholog); CMP-N-acetylneuraminate transmembrane transporter activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate transmembrane transport (ortholog); N-acetylneuraminate metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); congenital disorder of glycosylation type IIf (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955411 14443957 14469590 + 102027388 AGCD01011918;AGCD01011919;AGCD01011920;GBDF01017200;XM_005377728;XM_005377729;XM_013510792 XP_005377785;XP_005377786;XP_013366246 MODEL 8988791 protein-coding Wdhd1 WD repeat and HMG-box DNA binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); RNA binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); regulation of chromosome organization (ortholog); RNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleoplasm (ortholog) NW_004955409 8539617 8587537 + 102028723 AGCD01009420;GBDF01249434;XM_005376757;XM_005376758 XP_005376814;XP_005376815 MODEL 9024737 protein-coding LOC102008533 cytochrome c oxidase subunit 7C, mitochondrial ASSOCIATED WITH Alzheimer's disease (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955418 24413883 24416530 - 102008533 AGCD01019331;GBCE01002366;XM_005382301 XP_005382358 MODEL 39133769 misc_rna 7SK 7SK RNA 8969955 pseudo LOC102005910 nicotinamide phosphoribosyltransferase-like NW_004955463 5062434 5074910 - 102005910 AGCD01049628;AGCD01049629 MODEL 39131367 protein-coding C10orf143 chromosome 10 open reading frame 143 8848891 protein-coding Atp8b1 ATPase phospholipid transporting 8B1 ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); ATPase-coupled intramembrane lipid carrier activity (ortholog); cardiolipin binding (ortholog); INVOLVED IN aminophospholipid transport (ortholog); apical protein localization (ortholog); bile acid and bile salt transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); benign recurrent intrahepatic cholestasis 1 (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955402 41994993 42113380 - 102007071 AGCD01001030;AGCD01001031;AGCD01001032;GBDK01361540;XM_005372979;XM_013510988 XP_005373036;XP_013366442 MODEL 39131510 protein-coding PRIMA1 proline rich membrane anchor 1 8818526 pseudo LOC102004862 zinc finger protein 649-like NW_004955558 601767 612080 + 102004862 AGCD01073377 MODEL 39131833 rrna 5S_rRNA 5S ribosomal RNA 9045682 protein-coding Agbl4 AGBL carboxypeptidase 4 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN anterograde axonal transport of mitochondrion (ortholog); axonal transport (ortholog); central nervous system neuron development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955464 8847401 10195184 + 102030616 AGCD01050097;AGCD01050098;AGCD01050099;AGCD01050100;AGCD01050101;AGCD01050102;AGCD01050103;AGCD01050104;AGCD01050105;AGCD01050106;AGCD01050107;AGCD01050108;AGCD01050109;AGCD01050110;AGCD01050111;AGCD01050112;AGCD01050113;AGCD01050114;AGCD01050115;AGCD01050116;AGCD01050117;AGCD01050118;AGCD01050119;AGCD01050120;GBDF01194814;XM_005398625;XM_005398626;XM_013521735 XP_005398682;XP_005398683;XP_013377189 MODEL 9033919 ncrna LOC102014025 uncharacterized LOC102014025 NW_004955411 11085430 11090350 + 102014025 AGCD01011803;GBDF01237810;XR_001232812;XR_001232813;XR_001232814 MODEL 39134175 misc_rna 7SK 7SK RNA 8942609 ncrna LOC102012071 uncharacterized LOC102012071 NW_004955463 1330958 1377220 - 102012071 AGCD01049509;AGCD01049510;AGCD01049511;AGCD01049512;GBDF01208723;XR_263140 MODEL 9018453 protein-coding Apoltp apolipoprotein lipid transfer particle homolog NW_004955442 7126014 7171102 + 102029126 AGCD01037616;AGCD01037617;AGCD01037618;AGCD01037619;AGCD01037620;GBBH01101218;XM_013518020;XM_013518021;XM_013518022;XR_001235432;XR_001235433 XP_013373474;XP_013373475;XP_013373476 MODEL 8927885 ncrna LOC102004097 uncharacterized LOC102004097 NW_004955429 17006214 17015442 + 102004097 AGCD01028844;GBDJ01386401;XR_001234486;XR_001234487;XR_001234488;XR_001234489;XR_001234490;XR_261341;XR_261342;XR_261343;XR_261344;XR_261345;XR_261346;XR_261347 MODEL 9028597 pseudo LOC102003054 importin subunit alpha-1 pseudogene NW_004955519 4042312 4044048 + 102003054 AGCD01067975 MODEL 8775535 protein-coding CUNHXorf38 chromosome unknown CXorf38 homolog ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955565 1963195 1983171 + 102004987 AGCD01074336;GBBH01007180;XM_005413269;XM_005413270 XP_005413326;XP_005413327 MODEL 8799971 protein-coding Cer1 cerberus 1, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); morphogen activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); anterior/posterior pattern specification (ortholog); bone mineralization (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH ovarian cancer (ortholog); Spinal Fractures (ortholog); FOUND IN extracellular region (ortholog) NW_004955434 17738281 17740823 - 102017376 AGCD01032540;XM_005388699 XP_005388756 MODEL 9018562 protein-coding Bmp2k BMP2 inducible kinase ENCODES a protein that exhibits phosphatase regulator activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN regulation of bone mineralization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955433 3207512 3327688 + 102007147 AGCD01031417;AGCD01031418;AGCD01031419;AGCD01031420;GBDF01286250;XM_013516102 XP_013371556 MODEL 8802328 protein-coding Cldn11 claudin 11 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axon ensheathment (ortholog); cell adhesion (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); clear cell renal cell carcinoma (ortholog); hypomyelinating leukodystrophy 22 (ortholog); FOUND IN axon (ortholog); basal part of cell (ortholog); bicellular tight junction (ortholog) NW_004955420 580588 595052 + 102021130 AGCD01020550;GBDF01002100;XM_005382982 XP_005383039 MODEL 8729600 ncrna LOC102013669 uncharacterized LOC102013669 NW_004955402 23332562 23349864 - 102013669 AGCD01000621;AGCD01000622;XR_259064 MODEL 9032861 protein-coding Plekhg4 pleckstrin homology and RhoGEF domain containing G4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955484 9344830 9356182 - 102006352 AGCD01058415;GBDF01154360;XM_005403662;XM_013503891;XM_013503892 XP_005403719;XP_013359345;XP_013359346 MODEL 8769845 protein-coding LOC102018289 histone H4 NW_004955483 827742 828500 - 102018289 AGCD01057632;XM_013503798 XP_013359252 MODEL 8842804 protein-coding Slc35a2 solute carrier family 35 member A2 ENCODES a protein that exhibits UDP-galactose transmembrane transporter activity (ortholog); INVOLVED IN UDP-galactose transmembrane transport (ortholog); ASSOCIATED WITH aspiration pneumonia (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955543 434265 443460 - 102027678 AGCD01071585;GBBH01185436;XM_005411289;XM_013508172;XM_013508173 XP_005411346;XP_013363626;XP_013363627 MODEL 8962851 protein-coding Dlx5 distal-less homeobox 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Birth Weight (ortholog); bone development disease (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955432 13429832 13434160 - 102021270 AGCD01031016;GBDJ01090320;XM_005388074;XM_005388075 XP_005388131;XP_005388132 MODEL 8753322 trna Trnaa-ggc transfer RNA alanine (anticodon GGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955403;NW_004955407;NW_004955423;NW_004955421;NW_004955454 2513557;3403311;23453225;6344906;5926569 2513628;3403382;23453296;6344977;5926641 +;+;+;+;- 101978815 AGCD01001737;AGCD01006858;AGCD01021736;AGCD01024005;AGCD01045196 MODEL 8953501 protein-coding LOC102007386 vomeronasal type-1 receptor 1-like NW_004955584 327390 329695 + 102007386 AGCD01075939;GBDK01158023;XM_005414355 XP_005414412 MODEL 8850381 protein-coding Alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase ENCODES a protein that exhibits dolichyl-phosphate beta-glucosyltransferase activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955431 9059074 9097597 + 102026779 AGCD01030155;AGCD01030156;GBCE01170368;XM_005387674;XM_013515813 XP_005387731;XP_013371267 MODEL 8742537 protein-coding Il17c interleukin 17C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN neutrophil differentiation (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); FOUND IN extracellular region (ortholog) NW_004955541 2568941 2570440 + 102025843 AGCD01071416;XM_013507999 XP_013363453 MODEL 8922052 protein-coding Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cadherin binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); brain development (ortholog); PARTICIPATES IN Reelin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN axon (ortholog); contractile muscle fiber (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955481 7408089 7411813 + 102027525 AGCD01057064;GBBH01205369;GBDI01280279;XM_005402827 XP_005402884 MODEL 8769910 ncrna LOC102022357 uncharacterized LOC102022357 NW_004955455 9450420 9454003 - 102022357 AGCD01045922;GBDF01053970;XR_262850 MODEL 9026866 protein-coding Fgfrl1 fibroblast growth factor receptor like 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); diaphragm development (ortholog); heart valve morphogenesis (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cell-cell contact zone (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955514 499526 509208 + 102011793 AGCD01067013;GBCB01073055;XM_005408687 XP_005408744 MODEL 39134050 misc_rna 7SK 7SK RNA 8953539 protein-coding Ankrd50 ankyrin repeat domain containing 50 INVOLVED IN endocytic recycling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog) NW_004955428 16360602 16397829 + 102009636 AGCD01028021;GBDK01192159;XM_005386751 XP_005386808 MODEL 8970209 pseudo LOC102010080 protein MEMO1-like NW_004955429 4415409 4416220 + 102010080 AGCD01028489 MODEL 8900039 pseudo LOC102011704 CCA tRNA nucleotidyltransferase 1, mitochondrial-like NW_004955444 8744286 8760868 + 102011704 AGCD01038945 MODEL 8857547 pseudo LOC102008915 R-spondin-3 pseudogene NW_004955406 6122483 6124674 - 102008915 AGCD01005744 MODEL 39134357 misc_rna 7SK 7SK RNA 8709213 ncrna LOC102008177 uncharacterized LOC102008177 NW_004955404 49258791 49264921 - 102008177 AGCD01004518;GBCQ01074933;XR_259344 MODEL 8699556 protein-coding Ephx2 epoxide hydrolase 2 ENCODES a protein that exhibits 10-hydroxy-9-(phosphonooxy)octadecanoate phosphatase activity (ortholog); epoxide hydrolase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); epoxide metabolic process (ortholog); linoleic acid metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisome (ortholog) NW_004955403 49999563 50038800 + 102005434 AGCD01002954;AGCD01002955;GBBH01062366;XM_005373744 XP_005373801 MODEL 8946105 protein-coding Astl astacin like metalloendopeptidase ENCODES a protein that exhibits aspartic-type peptidase activity (ortholog); glutamic-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cell adhesion (ortholog); fertilization (ortholog); negative regulation of binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cortical granule (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955470 3719254 3732598 - 102025566 AGCD01052708;GBCQ01144366;XM_013522845 XP_013378299 MODEL 8812534 protein-coding Sf3b3 splicing factor 3b subunit 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of protein catabolic process (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955484 3307794 3357600 + 102004819 AGCD01058172;AGCD01058173;AGCD01058174;AGCD01058175;AGCD01058176;GBDF01118268;XM_005403485 XP_005403542 MODEL 8987107 protein-coding Snx20 sorting nexin 20 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN early endosome membrane (ortholog) NW_004955433 8725950 8734699 - 102016508 AGCD01031602;GBDJ01170428;XM_005388271 XP_005388328 MODEL 39132028 rrna 5S_rRNA 5S ribosomal RNA 8997181 ncrna LOC102007019 uncharacterized LOC102007019 NW_004955420 21387304 21399329 - 102007019 AGCD01021135;GBDK01343956;XR_260734 MODEL 8754528 protein-coding Acap2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament-based process (ortholog); cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endosome membrane (ortholog); plasma membrane (ortholog); ruffle (ortholog) NW_004955420 13649482 13777353 + 102025801 AGCD01020926;AGCD01020927;AGCD01020928;AGCD01020929;GBDF01188123;XM_005383183;XM_005383184 XP_005383240;XP_005383241 MODEL 8918412 protein-coding Cd38 CD38 molecule ENCODES a protein that exhibits hydrolase activity, acting on glycosyl bonds (ortholog); identical protein binding (ortholog); NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); B cell receptor signaling pathway (ortholog); female pregnancy (ortholog); PARTICIPATES IN ADP-ribosylation pathway, cyclic ribosylation; ASSOCIATED WITH acute myeloid leukemia (ortholog); Albuminuria (ortholog); Cardiomegaly (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955480 8177178 8218483 - 102015316 AGCD01056716;GBBH01103671;XM_005402521 XP_005402578 MODEL 8977831 pseudo LOC102018290 transmembrane protein 87B pseudogene NW_004955419 60235 292357 + 102018290 AGCD01019561;AGCD01019562;AGCD01019563;AGCD01019564;AGCD01019565;AGCD01019566;AGCD01019567;AGCD01019568;AGCD01019569;AGCD01019570;AGCD01019571 MODEL 8941506 protein-coding Primpol primase and DNA directed polymerase ENCODES a protein that exhibits chromatin binding (ortholog); DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN error-prone translesion synthesis (ortholog); mitochondrial DNA repair (ortholog); mitochondrial DNA replication (ortholog); ASSOCIATED WITH Myopia 22, Autosomal Dominant (ortholog); FOUND IN chromosome (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955403 24278727 24307312 - 102004998 AGCD01002271;GBDF01017298;XM_005373485;XM_013513029;XM_013513031;XM_013513040;XM_013513046 XP_005373542;XP_013368483;XP_013368485;XP_013368494;XP_013368500 MODEL 9032470 protein-coding Cbfb core-binding factor subunit beta ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); definitive hemopoiesis (ortholog); lymphocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); bone development disease (ortholog); FOUND IN core-binding factor complex (ortholog); nucleus (ortholog) NW_004955484 9503286 9557066 - 102017240 AGCD01058419;AGCD01058420;AGCD01058421;GBCE01074286;GBDI01134269;XM_005403703 XP_005403760 MODEL 8750762 protein-coding Rbp1 retinol binding protein 1 ENCODES a protein that exhibits all-trans-retinol binding (ortholog); retinol binding (ortholog); INVOLVED IN lipid homeostasis (ortholog); lipid storage (ortholog); regulation of granulocyte differentiation (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); carcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955508 6046738 6072202 + 102024936 AGCD01065912;GBDJ01081692;XM_005407782;XM_013506285 XP_005407839;XP_013361739 MODEL 8754045 protein-coding Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif 14 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Fraser syndrome 3 (ortholog); FOUND IN extracellular region (ortholog) NW_004955437 20592278 20664075 - 102010945 AGCD01034877;GBDK01317004;XM_005390048;XM_005390049;XM_005390050;XM_005390051;XR_001235098 XP_005390105;XP_005390106;XP_005390107;XP_005390108 MODEL 39134176 misc_rna 7SK 7SK RNA 8751704 ncrna LOC102009699 uncharacterized LOC102009699 NW_004955463 10028163 10058844 + 102009699 AGCD01049805;GBDF01179188;XR_263167;XR_263168 MODEL 8707316 protein-coding Apom apolipoprotein M ENCODES a protein that exhibits antioxidant activity (ortholog); lipid carrier activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); high-density lipoprotein particle assembly (ortholog); high-density lipoprotein particle clearance (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog); FOUND IN discoidal high-density lipoprotein particle (ortholog); extracellular region (ortholog); high-density lipoprotein particle (ortholog) NW_004955437 190609 192781 + 102014943 AGCD01034108;GBDF01004738;XM_005389332;XM_005389333 XP_005389389;XP_005389390 MODEL 9057895 pseudo LOC102008535 plasma membrane calcium-transporting ATPase 1-like NW_004955483 8088963 8090785 + 102008535 AGCD01057826 MODEL 8855409 protein-coding Wdpcp WD repeat containing planar cell polarity effector ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN auditory receptor cell morphogenesis (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 15 (ortholog); FOUND IN axonemal basal plate (ortholog) NW_004955424 20723592 21114801 + 102012774 AGCD01024871;AGCD01024872;AGCD01024873;AGCD01024874;AGCD01024875;AGCD01024876;AGCD01024877;AGCD01024878;AGCD01024879;AGCD01024880;AGCD01024881;AGCD01024882;AGCD01024883;AGCD01024884;AGCD01024885;AGCD01024886;AGCD01024887;AGCD01024888;AGCD01024889;AGCD01024890;AGCD01024891;AGCD01024892;AGCD01024893;GBDF01160193;XM_005385716;XM_005385718;XM_005385719;XM_005385720;XM_013514679;XM_013514680;XM_013514681;XM_013514682;XM_013514683;XM_013514684;XM_013514685;XM_013514686 XP_005385773;XP_005385775;XP_005385776;XP_005385777;XP_013370133;XP_013370134;XP_013370135;XP_013370136;XP_013370137;XP_013370138;XP_013370139;XP_013370140 MODEL 39133770 misc_rna 7SK 7SK RNA 8860731 protein-coding LOC102008917 keratin-associated protein 20-2-like NW_004955407 30198704 30198859 + 102008917 AGCD01007628;XM_005375646 XP_005375703 MODEL 8815701 ncrna LOC102010866 uncharacterized LOC102010866 NW_004955454 15132762 15145904 + 102010866 AGCD01045485;AGCD01045486;GBDF01016961;XR_001236261;XR_001236262 MODEL 8781350 protein-coding Rras RAS related ENCODES a protein that exhibits GDP binding (ortholog); GTPase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN face morphogenesis (ortholog); leukocyte differentiation (ortholog); negative regulation of cell migration (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH COVID-19 (ortholog); esophageal cancer (ortholog); juvenile myelomonocytic leukemia (ortholog) NW_004955559 1244658 1248774 + 102011367 AGCD01073638;GBDF01188765;XM_005412862 XP_005412919 MODEL 8909408 trna Trnaa-ugc transfer RNA alanine (anticodon UGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978816 AGCD01006174;AGCD01008468;AGCD01026910;AGCD01041021;AGCD01044158;AGCD01045001;AGCD01050627;AGCD01050630;AGCD01051583;AGCD01057078;AGCD01057309;AGCD01064062;AGCD01069830 MODEL 8832890 protein-coding Alg6 ALG6 alpha-1,3-glucosyltransferase ENCODES a protein that exhibits dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955423 26569824 26592857 - 102007569 AGCD01024097;AGCD01024098;GBBH01000138;GBDI01176676;XM_013514390 XP_013369844 MODEL 8956377 protein-coding Slc35a3 solute carrier family 35 member A3 ENCODES a protein that exhibits UDP-galactose transmembrane transporter activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine transmembrane transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); colon adenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955435 4747981 4774250 + 102003058 AGCD01032850;AGCD01032851;GBDF01225369;XM_013516439 XP_013371893 MODEL 9003765 ncrna LOC102004479 uncharacterized LOC102004479 NW_004955480 6033165 6036994 - 102004479 AGCD01056677;GBDF01220406;XR_001230890 MODEL 8890267 pseudo LOC102003061 protein tilB homolog NW_004955435 18116016 18118858 - 102003061 AGCD01033389 MODEL 8752160 protein-coding LOC102004099 olfactory receptor 8K5-like NW_004955511 1397789 1398727 + 102004099 AGCD01066366;XM_005407960 XP_005408017 MODEL 10208038 pseudo LOC106150343 lysine-rich coiled-coil protein 1-like NW_004955472 7688506 7690382 + 106150343 AGCD01053625 MODEL 8994078 protein-coding LOC102014026 uncharacterized LOC102014026 NW_004955412 13200937 13230604 + 102014026 AGCD01012829;GBBH01091540;XM_005378060;XM_005378061;XM_005378062;XM_005378063;XM_005378064;XM_005378065;XM_005378066;XM_005378067;XM_013511002;XM_013511003;XM_013511004 XP_005378117;XP_005378118;XP_005378119;XP_005378120;XP_005378121;XP_005378122;XP_005378123;XP_005378124;XP_013366456;XP_013366457;XP_013366458 MODEL 8958004 pseudo LOC102013293 60S ribosomal protein L12-like NW_004955418 2871913 2872420 + 102013293 AGCD01018776 MODEL 8729936 protein-coding Cercam cerebral endothelial cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955570 898157 925581 + 102025058 AGCD01074771;AGCD01074772;AGCD01074773;AGCD01074774;GBDI01149846;XM_005413539;XM_013509391;XM_013509392;XM_013509393;XM_013509394;XM_013509395 XP_005413596;XP_013364845;XP_013364846;XP_013364847;XP_013364848;XP_013364849 MODEL 8742857 protein-coding Bmp3 bone morphogenetic protein 3 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN negative regulation of ossification (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955433 5194312 5246125 + 102007805 AGCD01031492;AGCD01031493;GBCE01008766;XM_005388497 XP_005388554 MODEL 8950289 protein-coding Cldn12 claudin 12 INVOLVED IN tight junction assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cell periphery (ortholog); lateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955432 7632382 7640024 + 102022527 AGCD01030853;GBDF01035196;XM_005387993 XP_005388050 MODEL 8786214 protein-coding Plekhg5 pleckstrin homology and RhoGEF domain containing G5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endothelial cell chemotaxis (ortholog); endothelial cell migration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); autosomal recessive distal hereditary motor neuronopathy 4 (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955486 6099654 6121805 + 102010165 AGCD01059108;GBBH01085966;XM_005404088;XM_013504284;XM_013504285;XM_013504286;XM_013504288 XP_005404145;XP_013359738;XP_013359739;XP_013359740;XP_013359742 MODEL 8720420 ncrna LOC102008179 uncharacterized LOC102008179 NW_004955405 32467481 32489401 + 102008179 AGCD01005333;GBDF01013620;XR_001235728 MODEL 8936409 protein-coding Astn1 astrotactin 1 INVOLVED IN cell migration (ortholog); cell-cell adhesion (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955406 16445738 16742185 - 102017742 AGCD01005997;AGCD01005998;AGCD01005999;AGCD01006000;GBDJ01299410;XM_005374905;XM_005374906;XM_013520987;XM_013520991 XP_005374962;XP_005374963;XP_013376441;XP_013376445 MODEL 8976350 protein-coding Dlx6 distal-less homeobox 6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); split hand-foot malformation 1 (ortholog); Weissenbacher-Zweymuller syndrome (ortholog) NW_004955432 13415039 13420506 + 102020943 AGCD01031015;AGCD01031016;GBDJ01001146;XM_005388073;XR_001234676 XP_005388130 MODEL 8974669 pseudo LOC102007388 pre-mRNA-splicing factor RBM22 pseudogene NW_004955402 42301725 42303062 - 102007388 AGCD01001038 MODEL 8976899 protein-coding Atp8b2 ATPase phospholipid transporting 8B2 ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylcholine flippase activity (ortholog); phosphatidylcholine floppase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); phospholipid-translocating ATPase complex (ortholog) NW_004955545 850522 872650 + 102011048 AGCD01071821;GBDF01017530;XM_005411518;XM_013508246 XP_005411575;XP_013363700 MODEL 39131834 rrna 5S_rRNA 5S ribosomal RNA 10287539 protein-coding Il17d interleukin 17D ENCODES a protein that exhibits cytokine activity (ortholog); protein homodimerization activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN inflammatory response (ortholog); negative regulation of hemopoiesis (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Chronic Hepatitis C (ortholog); Cytomegalovirus Infections (ortholog); hidradenitis suppurativa (ortholog); FOUND IN extracellular region (ortholog) NW_004955497 1499700 1506557 + 106146836 AGCD01062463;AGCD01062464;GBDF01304881;XM_013505463 XP_013360917 MODEL 8960367 protein-coding LOC102004867 DCN1-like protein 1 NW_004955447 9722702 9793618 + 102004867 AGCD01040866;XM_013518479 XP_013373933 MODEL 8938936 protein-coding Agbl5 AGBL carboxypeptidase 5 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN defense response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); midbody (ortholog) NW_004955469 9023753 9041674 + 102018486 AGCD01052488;GBDF01007627;XM_005400448;XM_005400449;XM_013522608 XP_005400505;XP_005400506;XP_013378062 MODEL 8858683 protein-coding Cdk5r2 cyclin dependent kinase 5 regulatory subunit 2 ENCODES a protein that exhibits actin binding (ortholog); cyclin-dependent protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cerebellum development (ortholog); hippocampus development (ortholog); layer formation in cerebral cortex (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); membrane (ortholog) NW_004955453 14471625 14474082 - 102013903 AGCD01044865;AGCD01044866;GBBH01132441;XM_013519766 XP_013375220 MODEL 8922344 ncrna LOC102022361 uncharacterized LOC102022361 NW_004955456 16058739 16062110 - 102022361 AGCD01046686;GBCQ01059827;XR_262914 MODEL 8752588 ncrna LOC102018291 uncharacterized LOC102018291 NW_004955420 9727856 9731176 + 102018291 AGCD01020761;GBDF01025460;XR_001233744;XR_260688 MODEL 8741213 protein-coding Acap3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN neuron migration (ortholog); regulation of neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN growth cone (ortholog) NW_004955486 9495087 9508047 + 102025015 AGCD01059188;GBBH01228029;XM_005404234;XM_005404235;XM_013504190 XP_005404291;XP_005404292;XP_013359644 MODEL 8740878 protein-coding Fgg fibrinogen gamma chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH brain small vessel disease (ortholog); clear cell renal cell carcinoma (ortholog); congenital afibrinogenemia (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8786910 8794947 + 102008306 AGCD01053194;GBDF01040042;XM_005400931 XP_005400988 MODEL 8830631 pseudo LOC102009701 heterogeneous nuclear ribonucleoprotein A1-like NW_004955411 2718176 2739446 - 102009701 AGCD01011515;AGCD01011516 MODEL 8757412 ncrna LOC102011707 uncharacterized LOC102011707 NW_004955446 1115766 1138545 - 102011707 AGCD01039953;GBDF01181940;XR_262364 MODEL 9023177 protein-coding Ankrd52 ankyrin repeat domain 52 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955458 3849400 3867167 - 102027721 AGCD01047351;GBBH01228075;GBCB01039149;XM_013520831 XP_013376285 MODEL 39134358 misc_rna 7SK 7SK RNA 9028787 protein-coding LOC102010081 vomeronasal secretory protein 2-like NW_004955513 2601129 2609926 + 102010081 AGCD01066882;AGCD01066883;GBDF01023674;XM_005408421;XM_005408422;XM_013506591 XP_005408478;XP_005408479;XP_013362045 MODEL 39131540 protein-coding C11orf53 chromosome 11 open reading frame 53 9041590 protein-coding LOC102005911 gamma-aminobutyric acid receptor subunit rho-2 NW_004955411 16026663 16070295 - 102005911 AGCD01011964;GBDK01413093;XM_005377748 XP_005377805 MODEL 8772632 protein-coding Cerk ceramide kinase ENCODES a protein that exhibits ceramide kinase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN ceramide metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of trans-Golgi network membrane (ortholog); membrane (ortholog) NW_004955413 30658472 30693948 - 102014230 AGCD01014612;AGCD01014613;GBCE01076890;XM_005379519;XM_005379520 XP_005379576;XP_005379577 MODEL 8743490 ncrna LOC102007021 uncharacterized LOC102007021 NW_004955420 24298864 24300985 - 102007021 AGCD01021290;GBCQ01057710;XR_260746;XR_260747;XR_260748 MODEL 8847120 ncrna LOC102008918 uncharacterized LOC102008918 NW_004955408 4765453 4769584 - 102008918 AGCD01008118;GBDF01188494;XR_259660 MODEL 8794718 protein-coding Wdr1 WD repeat domain 1 ENCODES a protein that exhibits actin filament binding (ortholog); actin severing activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); apical junction assembly (ortholog); cortical cytoskeleton organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant intellectual developmental disorder 61 (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); anchoring junction (ortholog); cell junction (ortholog) NW_004955549 2640193 2674818 + 102012586 AGCD01072480;GBCQ01034784;GBDJ01009712;XM_013508539 XP_013363993 MODEL 8924950 ncrna LOC102012073 uncharacterized LOC102012073 NW_004955464 5894847 5895631 - 102012073 AGCD01050015;GBDF01046163;XR_001236693;XR_263202;XR_263203 MODEL 8970757 protein-coding Cd3d CD3d molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); INVOLVED IN positive thymic T cell selection (ortholog); T cell receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) NW_004955412 19481059 19484890 - 102008391 AGCD01012954;GBBH01091026;XM_005378237 XP_005378294 MODEL 8890141 protein-coding Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ENCODES a protein that exhibits [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity (ortholog); AMP-activated protein kinase activity (ortholog); ATP binding (ortholog); INVOLVED IN CAMKK-AMPK signaling cascade (ortholog); cellular response to calcium ion (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); amenorrhea (ortholog); breast cancer (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); chromatin (ortholog) NW_004955426 25079718 25102090 - 102025600 AGCD01026701;GBDK01358699;XM_005386244 XP_005386301 MODEL 8889416 protein-coding Rbp2 retinol binding protein 2 ENCODES a protein that exhibits binding (ortholog); lipid binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; FOUND IN cytosol (ortholog); synaptic ribbon (ortholog) NW_004955508 6111558 6135929 + 102025271 AGCD01065913;GBCQ01107672;XM_005407783 XP_005407840 MODEL 9007183 protein-coding CUNHXorf58 chromosome unknown CXorf58 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955509 4325198 4347495 + 102015332 AGCD01066064;GBCQ01050996;XM_005407834;XM_005407835 XP_005407891;XP_005407892 MODEL 8966730 ncrna LOC102013670 uncharacterized LOC102013670 NW_004955588 40134 44201 - 102013670 AGCD01076078;AGCD01076079;GBDF01235165;XR_265116 MODEL 8809659 pseudo LOC102004480 vacuole membrane protein 1 pseudogene NW_004955481 686239 728766 + 102004480 AGCD01056799;AGCD01056800;AGCD01056801;AGCD01056802;AGCD01056803 MODEL 8870204 protein-coding Cbl Cbl proto-oncogene ENCODES a protein that exhibits ephrin receptor binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN axon (ortholog); cilium (ortholog); cytosol (ortholog) NW_004955412 20307011 20388539 + 102004586 AGCD01013004;AGCD01013005;AGCD01013006;AGCD01013007;GBDF01124291;XM_005378327 XP_005378384 MODEL 8856663 protein-coding LOC102004101 olfactory receptor 5D18-like NW_004955511 575528 576477 - 102004101 AGCD01066333;XM_013506420 XP_013361874 MODEL 8977679 protein-coding LOC102014027 olfactory receptor 2B11-like NW_004955465 13748530 13762288 - 102014027 AGCD01050621;GBDF01098883;XM_005398974;XM_005398975 XP_005399031;XP_005399032 MODEL 8873619 pseudo LOC102008537 60S ribosomal protein L39 pseudogene NW_004955420 7015115 7015474 - 102008537 AGCD01020693;XM_005383030 MODEL 8877912 pseudo LOC102009712 olfactory receptor 2S2-like NW_004955472 459622 466367 + 102009712 AGCD01053339 MODEL 8776788 protein-coding Snx21 sorting nexin family member 21 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN early endosome membrane (ortholog) NW_004955445 11454802 11462625 - 102027584 AGCD01039695;GBDJ01139116;XM_005392407 XP_005392464 MODEL 39133773 misc_rna 7SK 7SK RNA 8876498 protein-coding Cldn14 claudin 14 ASSOCIATED WITH Acidoses (ortholog); autosomal recessive nonsyndromic deafness 29 (ortholog); Deafness (ortholog); FOUND IN bicellular tight junction (ortholog); plasma membrane (ortholog) NW_004955407 35641560 35728105 - 102010550 AGCD01007750;GBDI01155906;XM_005375735;XM_005375736 XP_005375792;XP_005375793 MODEL 8716564 ncrna LOC102005912 uncharacterized LOC102005912 NW_004955412 3097642 3103353 - 102005912 AGCD01012565;GBDF01016512;XR_001232865;XR_001232866;XR_001232867 MODEL 730469376 misc_rna DLX6-AS1_1 Embryonic ventral forebrain RNA 1 conserved region 1 8732839 ncrna LOC102007033 uncharacterized LOC102007033 NW_004955424 2197417 2203371 + 102007033 AGCD01024264;XR_001234174;XR_261035 MODEL 9018695 protein-coding Ager advanced glycosylation end-product specific receptor ENCODES a protein that exhibits advanced glycation end-product binding (ortholog); amyloid-beta binding (ortholog); DNA binding (ortholog); INVOLVED IN astrocyte activation (ortholog); astrocyte development (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN Ras mediated signaling pathway; receptor for advanced glycation end-products signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basal plasma membrane (ortholog) NW_004955437 645482 648607 - 102009984 AGCD01034152;GBDK01021118;XM_005389412;XM_005389414 XP_005389469;XP_005389471 MODEL 39134051 misc_rna 7SK 7SK RNA 9048916 protein-coding Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif 15 ENCODES a protein that exhibits endopeptidase activity (ortholog); extracellular matrix binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955412 31336759 31360905 + 102023678 AGCD01013336;AGCD01013337;GBDI01296458;XM_005378569 XP_005378626 MODEL 39134177 misc_rna 7SK 7SK RNA 9017489 protein-coding LOC102004870 BMP-binding endothelial regulator protein NW_004955582 926239 1169313 + 102004870 AGCD01075777;AGCD01075778;AGCD01075779;AGCD01075780;AGCD01075781;AGCD01075782;AGCD01075783;AGCD01075784;AGCD01075785;GBCE01159927;GBCE01159930;XM_005414284 XP_005414341 MODEL 9067949 protein-coding LOC102003062 vomeronasal type-2 receptor 116-like NW_004955532 118728 136794 + 102003062 AGCD01070099;AGCD01070100;XM_013507568 XP_013363022 MODEL 10236597 ncrna LOC106150344 uncharacterized LOC106150344 NW_004955472 12739492 12743856 + 106150344 AGCD01053814;GBDJ01139285;XR_001237105 MODEL 8970189 protein-coding Ephx3 epoxide hydrolase 3 ENCODES a protein that exhibits epoxide hydrolase activity (ortholog); INVOLVED IN epoxide metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN membrane (ortholog) NW_004955495 7995979 8001423 + 102009853 AGCD01062174;GBDK01360091;XM_005406086;XM_013505126;XM_013505127 XP_005406143;XP_013360580;XP_013360581 MODEL 8906577 protein-coding Sf3b4 splicing factor 3b subunit 4 ENCODES a protein that exhibits splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); cleft palate (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog); precatalytic spliceosome (ortholog); spliceosomal complex (ortholog) NW_004955413 826190 830502 + 102021955 AGCD01013491;GBDF01082584;XM_005378708 XP_005378765 MODEL 8736224 protein-coding Acat1 acetyl-CoA acetyltransferase 1 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); C-acetyltransferase activity (ortholog); cholesterol O-acyltransferase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA catabolic process (ortholog); adipose tissue development (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; ASSOCIATED WITH arteriosclerosis (ortholog); beta-ketothiolase deficiency (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955412 10350088 10369806 + 102004581 AGCD01012766;AGCD01012767;GBCB01044709;XM_005378034 XP_005378091 MODEL 9045788 protein-coding Bmp4 bone morphogenetic protein 4 ENCODES a protein that exhibits BMP receptor binding (ortholog); chemoattractant activity (ortholog); co-receptor binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure regression (ortholog); angiogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glypican signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); Acute Otitis Media (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955409 9432835 9439680 + 102005114 AGCD01009440;AGCD01009441;GBCQ01040326;XM_005376769;XM_005376770 XP_005376826;XP_005376827 MODEL 39134359 misc_rna 7SK 7SK RNA 8783671 protein-coding Apoo apolipoprotein O INVOLVED IN cristae formation (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lactic acidosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); extracellular region (ortholog); Golgi membrane (ortholog) NW_004955509 4256834 4325086 - 102015873 AGCD01066061;AGCD01066062;AGCD01066063;AGCD01066064;GBDF01222597;XM_005407836;XM_005407837;XM_013506305 XP_005407893;XP_005407894;XP_013361759 MODEL 39132029 rrna 5S_rRNA 5S ribosomal RNA 8964150 pseudo LOC102010868 transformer-2 protein homolog alpha pseudogene NW_004955406 19929201 19930073 - 102010868 AGCD01006095 MODEL 8803593 protein-coding Plekhg6 pleckstrin homology and RhoGEF domain containing G6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell junction (ortholog); cleavage furrow (ortholog) NW_004955413 3969459 3982348 + 102012179 AGCD01013590;AGCD01013591;GBBH01193665;XM_005378757 XP_005378814 MODEL 8719759 protein-coding LOC102007390 EKC/KEOPS complex subunit LAGE3-like NW_004955595 891199 900679 + 102007390 AGCD01076488;AGCD01076489;AGCD01076490;GBDK01408734;XM_005414678 XP_005414735 MODEL 8916367 protein-coding Rras2 RAS related 2 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH body dysmorphic disorder (ortholog); central nervous system germ cell tumor (ortholog); cervical cancer (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955414 29482502 29546102 - 102022808 AGCD01015705;AGCD01015706;GBCE01134839;GBDK01194561;XM_005415344 XP_005415401 MODEL 8885480 protein-coding LOC102008182 glutathione S-transferase theta-1-like NW_004955455 8317663 8323287 - 102008182 AGCD01045886;GBBH01177305;XM_005396408 XP_005396465 MODEL 8959319 protein-coding Il17f interleukin 17F ENCODES a protein that exhibits cytokine activity (ortholog); cytokine binding (ortholog); cytokine receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic asthma (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955411 5852767 5859208 + 102013268 AGCD01011664;XM_013510734 XP_013366188 MODEL 9002802 protein-coding Slc35a4 solute carrier family 35 member A4 INVOLVED IN positive regulation of cellular respiration (ortholog); positive regulation of translation in response to stress (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955418 114916 116878 - 102030308 AGCD01018668;GBDK01127414;XM_005382020 XP_005382077 MODEL 8943424 protein-coding Cldn15 claudin 15 ENCODES a protein that exhibits paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of intestinal D-glucose absorption (ortholog); regulation of intestinal lipid absorption (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); malignant mesothelioma (ortholog); FOUND IN lateral plasma membrane (ortholog); plasma membrane (ortholog); tight junction (ortholog) NW_004955456 16062044 16067612 + 102021850 AGCD01046686;AGCD01046687;GBDK01040110;XM_005396856;XM_005396857 XP_005396913;XP_005396914 MODEL 9050766 protein-coding Cdk5rap1 CDK5RAP1 mitochondrial tRNA methylthiotransferase ENCODES a protein that exhibits protein-containing complex binding (ortholog); tRNA-2-methylthio-N(6)-dimethylallyladenosine(37) synthase activity (ortholog); INVOLVED IN mitochondrial tRNA modification (ortholog); positive regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955422 27878048 27907157 + 102028432 AGCD01023339;AGCD01023340;GBDJ01424325;XM_013514321 XP_013369775 MODEL 8830886 pseudo LOC102022364 1,5-anhydro-D-fructose reductase pseudogene NW_004955408 16942735 16943660 - 102022364 AGCD01008449 MODEL 8887929 protein-coding Cd3e CD3e molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); cerebellum development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH CD3epsilon deficiency (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); cell body (ortholog); cell-cell junction (ortholog) NW_004955412 19464666 19476425 + 102007874 AGCD01012953;AGCD01012954;GBDI01016643;XM_005378235;XM_013511255 XP_005378292;XP_013366709 MODEL 9061556 protein-coding Rbp3 retinol binding protein 3 ENCODES a protein that exhibits retinol binding (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH autoimmune disease (ortholog); cone-rod dystrophy (ortholog); esophageal cancer (ortholog); FOUND IN cone matrix sheath (ortholog); extracellular region (ortholog); interphotoreceptor matrix (ortholog) NW_004955556 2217528 2225369 + 102014296 AF297280;AGCD01073208;AJ427246;GBDF01290208;XM_005412613 AAK62259;CAD20284;XP_005412670 MODEL 8702555 protein-coding Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ENCODES a protein that exhibits [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity (ortholog); AMP-activated protein kinase activity (ortholog); ATP binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955464 2996608 3062197 - 102021219 AGCD01049967;AGCD01049968;AGCD01049969;GBCB01001848;XM_005398501;XM_013521596 XP_005398558;XP_013377050 MODEL 8914789 ncrna LOC102010085 uncharacterized LOC102010085 NW_004955518 1844184 1923729 + 102010085 AGCD01067766;AGCD01067767;AGCD01067768;AGCD01067769;GBDJ01260326;XR_264565 MODEL 9038617 protein-coding Ankrd53 ankyrin repeat domain 53 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); positive regulation of microtubule polymerization (ortholog); regulation of mitotic cytokinesis (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN spindle (ortholog); spindle pole (ortholog) NW_004955424 14247070 14253072 - 102023820 AGCD01024648;GBDF01123101;XM_013514588 XP_013370042 MODEL 8897703 protein-coding Astn2 astrotactin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); INVOLVED IN establishment of body hair planar orientation (ortholog); negative regulation of protein localization to cell surface (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN cell pole (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955419 10486200 11387553 + 102003344 AGCD01019945;AGCD01019946;AGCD01019947;AGCD01019948;AGCD01019949;AGCD01019950;AGCD01019951;AGCD01019952;AGCD01019953;AGCD01019954;AGCD01019955;GBBH01184955;XM_005382610;XM_013513260;XM_013513261;XM_013513263 XP_005382667;XP_013368714;XP_013368715;XP_013368717 MODEL 39131835 rrna 5S_rRNA 5S ribosomal RNA 8822385 protein-coding Alg8 ALG8 alpha-1,3-glucosyltransferase ENCODES a protein that exhibits dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Apnea (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955414 13832808 13863076 + 102005585 AGCD01015121;AGCD01015122;AGCD01015123;GBDK01241792;XM_005379820;XM_005379821 XP_005379877;XP_005379878 MODEL 8949998 protein-coding Snx22 sorting nexin 22 ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); osteogenesis imperfecta (ortholog) NW_004955450 11246817 11248870 - 102010010 AGCD01042652;GBBH01150804;GBDK01011077;XM_013519037;XM_013519038;XR_001235925 XP_013374491;XP_013374492 MODEL 8875293 protein-coding Bmp5 bone morphogenetic protein 5 ENCODES a protein that exhibits BMP receptor binding (ortholog); INVOLVED IN allantois development (ortholog); anterior head development (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrioventricular septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955411 450674 557213 + 102003741 AGCD01011458;AGCD01011459;AGCD01011460;AGCD01011461;GBCE01076623;XM_005377586;XM_013510909 XP_005377643;XP_013366363 MODEL 8934202 protein-coding Wdr11 WD repeat domain 11 INVOLVED IN cilium assembly (ortholog); head development (ortholog); heart development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Autosomal Recessive Intellectual Developmental Disorder 78 (ortholog); CHARGE syndrome (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955551 1733079 1788354 + 102015571 AGCD01072698;AGCD01072699;GBDF01220834;XM_005412176 XP_005412233 MODEL 8958547 protein-coding LOC102013296 olfactory receptor 14A2-like NW_004955418 30355010 30355939 - 102013296 AGCD01019514;XM_005382373 XP_005382430 MODEL 8919876 ncrna LOC102018298 uncharacterized LOC102018298 NW_004955494 7683032 7765368 - 102018298 AGCD01061554;AGCD01061555;GBCC01029716;XR_264118 MODEL 730469143 misc_rna DLX6-AS1_2 Embryonic ventral forebrain RNA 1 conserved region 2 9038898 pseudo LOC102007037 polyprenol reductase-like NW_004955426 12589238 12590965 + 102007037 AGCD01026340 MODEL 8935775 ncrna LOC102013672 uncharacterized LOC102013672 NW_004955402 58006268 58037026 - 102013672 AGCD01001520;AGCD01001521;GBDJ01205595;XR_001232983 MODEL 8839780 protein-coding Agfg1 ArfGAP with FG repeats 1 INVOLVED IN acrosome assembly (ortholog); intermediate filament organization (ortholog); spermatid nucleus differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); neuronal cell body (ortholog); nucleus (ortholog) NW_004955453 7066509 7127878 - 102009011 AGCD01044736;AGCD01044737;GBCQ01094513;GBDF01002248;XM_013519948 XP_013375402 MODEL 8926776 protein-coding Fggy FGGY carbohydrate kinase domain containing ENCODES a protein that exhibits D-ribulokinase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); neuron cellular homeostasis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955464 188037 683230 - 102013064 AGCD01049928;AGCD01049929;AGCD01049930;AGCD01049931;AGCD01049932;AGCD01049933;AGCD01049934;AGCD01049935;AGCD01049936;AGCD01049937;AGCD01049938;AGCD01049939;AGCD01049940;AGCD01049941;GBBH01150983;XM_005398479;XM_005398481;XM_013521724;XM_013521725;XM_013521726;XM_013521727;XM_013521728;XM_013521729;XM_013521730;XM_013521731 XP_005398536;XP_005398538;XP_013377178;XP_013377179;XP_013377180;XP_013377181;XP_013377182;XP_013377183;XP_013377184;XP_013377185 MODEL 9044240 protein-coding LOC102004103 EF-hand calcium-binding domain-containing protein 1-like NW_004955432 9467793 9483554 - 102004103 AGCD01030906;GBDK01028185;XM_005388019;XM_013515941 XP_005388076;XP_013371395 MODEL 8876574 protein-coding LOC102014028 NXPE family member 1 ENCODES a protein that exhibits N-acetylneuraminate 9-O-acetyltransferase activity (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955412 16107277 16115577 - 102014028 AGCD01012893;XM_005378162;XM_013510993 XP_005378219;XP_013366447 MODEL 9004883 protein-coding Cblb Cbl proto-oncogene B ENCODES a protein that exhibits protein kinase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); immune response (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955427 6601651 6812896 - 102016178 AGCD01027033;AGCD01027034;AGCD01027035;AGCD01027036;AGCD01027037;AGCD01027038;GBCE01136888;GBDF01083852;XM_013515156 XP_013370610 MODEL 8699639 protein-coding LOC102008539 sodium- and chloride-dependent transporter XTRP3A-like NW_004955420 26201378 26228005 + 102008539 AGCD01021392;AGCD01021393;AGCD01021394;AGCD01021395;GBCQ01102604;XM_013513346 XP_013368800 MODEL 8723813 protein-coding Cerkl CERK like autophagy regulator ENCODES a protein that exhibits ceramide kinase activity (ortholog); sphingolipid binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); sphingolipid biosynthetic process (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); esophageal cancer (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955403 15620047 15727957 + 102030029 AGCD01002051;AGCD01002052;GBDI01208278;GBDI01208281;XM_013512521 XP_013367975 MODEL 39133793 misc_rna 7SK 7SK RNA 8914419 protein-coding Atp8b3 ATPase phospholipid transporting 8B3 ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylserine floppase activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); phospholipid translocation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955495 6222764 6242104 + 102025922 AGCD01062058;AGCD01062059;AGCD01062060;AGCD01062061;GBDF01007630;XM_005405949;XM_005405950;XM_005405951;XM_005405952 XP_005406006;XP_005406007;XP_005406008;XP_005406009 MODEL 8989104 ncrna LOC102008922 uncharacterized LOC102008922 NW_004955460 11145349 11152507 + 102008922 AGCD01048629;AGCD01048630;GBCQ01032294;XR_001236540 MODEL 8768272 ncrna LOC102005913 uncharacterized LOC102005913 NW_004955465 7025399 7028146 - 102005913 AGCD01050450;GBCQ01175139;XR_001236763;XR_263247 MODEL 8937518 protein-coding LOC102010870 keratin-associated protein 20-2-like NW_004955407 30265855 30266145 + 102010870 AGCD01007631;AGCD01007632;XM_005375652 XP_005375709 MODEL 8703728 protein-coding Rrbp1 ribosome binding protein 1 INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955415 26601707 26634747 - 102010154 AGCD01016600;AGCD01016601;GBBH01001406;XM_013512263 XP_013367717 MODEL 8722973 protein-coding Plekhg7 pleckstrin homology and RhoGEF domain containing G7 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog) NW_004955405 29703523 29760551 + 102022562 AGCD01005256;GBDJ01353997;XM_005374457;XM_005374459;XM_005374460;XM_013518255;XM_013518257;XM_013518258;XM_013518264;XM_013518269;XM_013518275 XP_005374514;XP_005374516;XP_005374517;XP_013373709;XP_013373711;XP_013373712;XP_013373718;XP_013373723;XP_013373729 MODEL 39134052 misc_rna 7SK 7SK RNA 8895236 ncrna LOC102004481 uncharacterized LOC102004481 NW_004955482 1525707 1528873 - 102004481 AGCD01057219;AGCD01057220;GBDI01053452;XR_001230959;XR_263819 MODEL 8893042 pseudo LOC102011715 pre-mRNA-splicing factor SLU7 pseudogene NW_004955402 54098472 54100151 + 102011715 AGCD01001386 MODEL 9042858 ncrna LOC102003065 uncharacterized LOC102003065 NW_004955437 17589746 17591956 + 102003065 AGCD01034751;GBDF01287696;XR_261886 MODEL 10215760 pseudo LOC106150345 ATP-dependent RNA helicase DDX18 pseudogene NW_004955473 5522962 5525460 - 106150345 AGCD01053979 MODEL 8722343 protein-coding Wdr12 WD repeat domain 12 INVOLVED IN maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955457 11947816 11970066 + 102030389 AGCD01046996;AGCD01046997;GBDF01016523;XM_005397046;XM_005397047 XP_005397103;XP_005397104 MODEL 9014183 protein-coding Cdk5rap2 CDK5 regulatory subunit associated protein 2 ENCODES a protein that exhibits calmodulin binding (ortholog); gamma-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN brain development (ortholog); centriole replication (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive primary microcephaly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955419 7412177 7606883 + 102028863 AGCD01019881;AGCD01019882;AGCD01019883;GBDF01010920;XM_005382603;XM_013513193;XM_013513194;XM_013513195;XM_013513196;XM_013513197;XM_013513198;XM_013513199;XM_013513200;XM_013513201 XP_005382660;XP_013368647;XP_013368648;XP_013368649;XP_013368650;XP_013368651;XP_013368652;XP_013368653;XP_013368654;XP_013368655 MODEL 8852069 protein-coding LOC102022366 bcl-2-like protein 2 NW_004955409 37012376 37017785 - 102022366 AGCD01010488;GBDK01240448;XM_005377084;XM_005377085 XP_005377141;XP_005377142 MODEL 8731910 protein-coding Ephx4 epoxide hydrolase 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955423 2389745 2425036 - 102026760 AGCD01023472;GBDJ01093449;XM_005385060 XP_005385117 MODEL 8895369 pseudo LOC102009713 tubulin alpha-1 chain-like NW_004955415 27942717 27943523 - 102009713 AGCD01016636 MODEL 8731080 protein-coding Acat2 acetyl-CoA acetyltransferase 2 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to nutrient (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH arteriosclerosis (ortholog); colon adenocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog) NW_004955439 21123886 21142562 - 102017388 AGCD01036140;AGCD01036141;GBDF01081090;XM_005390719 XP_005390776 MODEL 15036839 trna Trnac-aca transfer RNA cysteine (anticodon ACA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978832 8944025 ncrna LOC102012074 uncharacterized LOC102012074 NW_004955411 18978377 19015927 - 102012074 AGCD01012029;AGCD01012030;GBDF01115149;XR_259938 MODEL 8951158 pseudo LOC102004873 60S ribosomal protein L7-like 1 pseudogene NW_004955402 41521289 41522029 + 102004873 AGCD01001016 MODEL 39132030 rrna 5S_rRNA 5S ribosomal RNA 8934593 pseudo LOC102007392 aldose reductase-related protein 2 pseudogene NW_004955450 13309903 13310837 + 102007392 AGCD01042733 MODEL 8921746 protein-coding Ankrd54 ankyrin repeat domain 54 ENCODES a protein that exhibits protein kinase regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); positive regulation of erythrocyte differentiation (ortholog); regulation of intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); nucleus (ortholog) NW_004955413 24203653 24216702 - 102011426 AGCD01014356;GBCE01002318;XM_005379229 XP_005379286 MODEL 8945473 protein-coding Il17ra interleukin 17 receptor A ENCODES a protein that exhibits interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); defense response to fungus (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955454 5230384 5252769 + 102028716 AGCD01045136;GBBH01142826;GBDK01129636;XM_005395965;XM_013520213;XM_013520214;XM_013520215 XP_005396022;XP_013375667;XP_013375668;XP_013375669 MODEL 8955178 protein-coding Asxl1 ASXL transcriptional regulator 1 ENCODES a protein that exhibits nuclear retinoic acid receptor binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone development (ortholog); bone marrow development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); atrial heart septal defect (ortholog); FOUND IN nucleus (ortholog); PR-DUB complex (ortholog) NW_004955422 28662392 28721896 - 102008234 AGCD01023365;AGCD01023366;GBCB01085932;GBDF01052888;XM_005384868 XP_005384925 MODEL 9067286 protein-coding CUNHXorf65 chromosome unknown CXorf65 homolog ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gene expression (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955475 10674333 10676485 - 102029508 AGCD01055108;GBDF01250388;XM_005401644;XM_005401645;XM_005401646;XM_005401647 XP_005401701;XP_005401702;XP_005401703;XP_005401704 MODEL 8974066 ncrna LOC102013298 uncharacterized LOC102013298 NW_004955485 7764867 7771120 - 102013298 AGCD01058675;GBBH01203416;XR_001231069;XR_001231070;XR_001231071;XR_001231072;XR_001231073 MODEL 9058040 protein-coding LOC102018299 olfactory receptor 7E24-like NW_004955495 664850 665820 - 102018299 AGCD01061648;XM_005405556 XP_005405613 MODEL 8777407 protein-coding Sf3b5 splicing factor 3b subunit 5 ENCODES a protein that exhibits RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955436 16380412 16381373 + 102004851 AGCD01033915;GBBH01031902;XM_005389240 XP_005389297 MODEL 39134360 misc_rna 7SK 7SK RNA 8940451 protein-coding Agfg2 ArfGAP with FG repeats 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955573 337610 364845 - 102021813 AGCD01074975;AGCD01074976;GBCQ01002988;XM_005413722;XM_005413723;XM_005413724;XM_013509478;XM_013509479 XP_005413779;XP_005413780;XP_005413781;XP_013364932;XP_013364933 MODEL 8857177 protein-coding Apool apolipoprotein O like PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH autistic disorder (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955529 3849326 3929588 + 102022117 AGCD01069803;AGCD01069804;AGCD01069805;AGCD01069806;GBBH01149693;XM_005410081 XP_005410138 MODEL 8700618 protein-coding LOC102014035 ral guanine nucleotide dissociation stimulator-like NW_004955413 4784689 4789519 + 102014035 AGCD01013628;GBDF01155508;XM_005378864 XP_005378921 MODEL 8936265 pseudo LOC102010087 heparan-alpha-glucosaminide N-acetyltransferase pseudogene NW_004955434 9056708 9057564 - 102010087 AGCD01032287 MODEL 39131836 rrna 5S_rRNA 5S ribosomal RNA 8926598 gene LOC102008184 Ig lambda-2 chain V region-like NW_004955455 6522852 6523304 + 102008184 AGCD01045801;XM_005396573 MODEL 8783003 protein-coding Alg9 ALG9 alpha-1,2-mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955412 13510714 13599216 - 102019374 AGCD01012840;AGCD01012841;AGCD01012842;GBDI01026373;XM_005378081;XM_005378083;XM_013511226 XP_005378138;XP_005378140;XP_013366680 MODEL 8940670 pseudo LOC102004874 F-box only protein 42-like NW_004955402 39161338 39165052 - 102004874 AGCD01000977 MODEL 39134178 misc_rna 7SK 7SK RNA 8962200 protein-coding Snx24 sorting nexin 24 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955521 1006353 1126062 + 102021382 AGCD01068167;AGCD01068168;AGCD01068169;AGCD01068170;AGCD01068171;AGCD01068172;AGCD01068173;GBCB01022225;XM_013507082;XM_013507083;XM_013507084 XP_013362536;XP_013362537;XP_013362538 MODEL 8967147 protein-coding Rreb1 ras responsive element binding protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of brown fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog) NW_004955465 6572593 6757423 - 102030398 AGCD01050445;AGCD01050446;AGCD01050447;AGCD01050448;GBDJ01141847;XM_005398860;XM_005398862;XM_005398863;XM_005398865;XM_005398868;XM_013521815;XM_013521816;XM_013521817;XM_013521818;XM_013521819 XP_005398917;XP_005398919;XP_005398920;XP_005398922;XP_005398925;XP_013377269;XP_013377270;XP_013377271;XP_013377272;XP_013377273 MODEL 8896979 protein-coding Cldn16 claudin 16 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN paracellular transport (ortholog); positive regulation of calcium ion transport (ortholog); renal absorption (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); genetic disease (ortholog); Hypercalciuria (ortholog); FOUND IN bicellular tight junction (ortholog); plasma membrane (ortholog); tight junction (ortholog) NW_004955420 17684752 17714639 - 102015526 AGCD01021026;GBDJ01338095;XM_005383225;XM_005383226 XP_005383282;XP_005383283 MODEL 8812611 ncrna LOC102007038 uncharacterized LOC102007038 NW_004955427 4191968 4222744 + 102007038 AGCD01026962;GBDF01207463;XR_261229 MODEL 8901865 protein-coding Plekhh1 pleckstrin homology, MyTH4 and FERM domain containing H1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955466 2616627 2653804 - 102014029 AGCD01050750;AGCD01050751;GBDJ01316571;XM_013521892 XP_013377346 MODEL 8926808 ncrna LOC102013303 uncharacterized LOC102013303 NW_004955421 26314686 26333180 - 102013303 AGCD01022259;AGCD01022260;GBDF01281827;XR_001233836;XR_001233837;XR_260829 MODEL 8816385 pseudo LOC102004483 LYR motif-containing protein 2 pseudogene NW_004955483 1814352 1814618 + 102004483 AGCD01057654;XM_005403350 MODEL 8788712 protein-coding Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); male gamete generation (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955504 3167142 3320632 + 102022834 AGCD01064864;AGCD01064865;AGCD01064866;AGCD01064867;GBCQ01126940;XM_013505868 XP_013361322 MODEL 8964581 ncrna LOC102004107 uncharacterized LOC102004107 NW_004955516 3479563 3512968 + 102004107 AGCD01067493;AGCD01067494;GBCB01099233;XR_264534;XR_264535 MODEL 8726125 protein-coding Cdk5rap3 CDK5 regulatory subunit associated protein 3 ENCODES a protein that exhibits cyclin binding (ortholog); MDM2/MDM4 family protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN apoptotic nuclear changes (ortholog); cell population proliferation (ortholog); definitive erythrocyte differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 13160811 13170012 - 102010329 AGCD01043455;AGCD01043456;GBDJ01011824;XM_005394252 XP_005394309 MODEL 8921307 ncrna LOC102008548 uncharacterized LOC102008548 NW_004955423 309053 319789 + 102008548 AGCD01023411;GBDF01260789;XR_260936 MODEL 39133794 misc_rna 7SK 7SK RNA 8940567 protein-coding Slc35a5 solute carrier family 35 member A5 ENCODES a protein that exhibits pyrimidine nucleotide-sugar transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955427 12906650 12940419 + 102026997 AGCD01027230;GBDF01126546;XM_005386388;XM_005386389;XM_013515192;XR_261261;XR_261262;XR_261263;XR_261265;XR_261266 XP_005386445;XP_005386446;XP_013370646 MODEL 8878592 ncrna LOC102008924 uncharacterized LOC102008924 NW_004955410 24913016 24966433 + 102008924 AGCD01011136;GBDK01310034;XR_259862 MODEL 8790397 pseudo LOC102005914 shugoshin-like 1 pseudogene NW_004955465 13332971 13334196 - 102005914 AGCD01050600 MODEL 8892776 ncrna LOC102007395 uncharacterized LOC102007395 NW_004955451 5460378 5468253 + 102007395 AGCD01043168;GBBH01102354;XR_262581 MODEL 8773462 pseudo LOC102010871 60S ribosomal protein L39 pseudogene NW_004955455 11174068 11175753 - 102010871 AGCD01045985;XM_005396506;XM_005396507 MODEL 8981785 protein-coding Dmac1 distal membrane arm assembly component 1 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955434 11530632 11539237 - 102014280 AGCD01032379;AGCD01032380;GBBH01140816;XM_005388752 XP_005388809 MODEL 9055836 protein-coding Bmp6 bone morphogenetic protein 6 ENCODES a protein that exhibits BMP receptor binding (ortholog); cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); adult T-cell leukemia/lymphoma (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog); vesicle (ortholog) NW_004955465 6053600 6201254 - 102020895 AGCD01050437;AGCD01050438;GBCE01031404;GBCQ01095928;XM_013521839 XP_013377293 MODEL 8939243 protein-coding Rbp4 retinol binding protein 4 ENCODES a protein that exhibits molecular carrier activity (ortholog); protein-containing complex binding (ortholog); retinol binding (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); detection of light stimulus involved in visual perception (ortholog); embryonic organ morphogenesis (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute pyelonephritis (ortholog); alcohol-associated liver disease (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955507 112342 120050 - 102029207 AGCD01065462;AGCD01065463;GBBH01117602;GBCE01001890;XM_013506237 XP_013361691 MODEL 8709157 protein-coding Asxl2 ASXL transcriptional regulator 2 ENCODES a protein that exhibits chromatin binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN adult heart development (ortholog); embryonic skeletal system morphogenesis (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955469 7786030 7923739 - 102007881 AGCD01052432;AGCD01052433;AGCD01052434;AGCD01052435;AGCD01052436;AGCD01052437;AGCD01052438;GBDJ01018939;XM_005400412;XM_005400413;XM_005400414;XM_013522575 XP_005400469;XP_005400470;XP_005400471;XP_013378029 MODEL 8941664 protein-coding Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); nail development (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH anuria (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955455 11877407 11889987 - 102016235 AGCD01046021;GBCB01038378;XM_005396524;XM_005396525 XP_005396581;XP_005396582 MODEL 9003964 ncrna LOC102011719 uncharacterized LOC102011719 NW_004955799 1703 3502 + 102011719 AGCD01078370;GBDF01089331;XR_265186 MODEL 8906171 protein-coding CUNHXorf66 chromosome unknown CXorf66 homolog ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955489 5318531 5327883 + 102030639 AGCD01059934;AGCD01059935;GBDF01195698;XM_005404549 XP_005404606 MODEL 8785958 protein-coding Wdr13 WD repeat domain 13 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); INVOLVED IN negative regulation of type B pancreatic cell proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal atresia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955543 182279 190435 + 102022017 AGCD01071563;GBDJ01277750;XM_005411270;XM_005411271 XP_005411327;XP_005411328 MODEL 8847591 protein-coding Cblc Cbl proto-oncogene C ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN negative regulation of epidermal growth factor receptor signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955555 1921896 1941247 + 102021284 AGCD01073116;AGCD01073117;GBBH01167021;GBDK01135462;XM_013508694;XM_013508695;XM_013508696;XM_013508697;XM_013508698 XP_013364148;XP_013364149;XP_013364150;XP_013364151;XP_013364152 MODEL 8814197 protein-coding Cers1 ceramide synthase 1 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); sphingosine N-acyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to dithiothreitol (ortholog); cellular response to mycotoxin (ortholog); ASSOCIATED WITH asphyxia neonatorum (ortholog); cerebellar ataxia (ortholog); Insulin Resistance (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955524 2788672 2798068 + 102006945 AGCD01068835;AGCD01068836;AGCD01068837;GBCE01034095;GBDF01122555;XM_013507225 XP_013362679 MODEL 39134361 misc_rna 7SK 7SK RNA 8951650 protein-coding Acbd3 acyl-CoA binding domain containing 3 ENCODES a protein that exhibits protein kinase A regulatory subunit binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955489 337578 381557 - 102020016 AGCD01059796;AGCD01059797;AGCD01059798;AGCD01059799;GBBH01050351;GBDF01125939;XM_013504481 XP_013359935 MODEL 8785110 ncrna LOC102014036 uncharacterized LOC102014036 NW_004955413 24324493 24370270 + 102014036 AGCD01014360;AGCD01014361;AGCD01014362;GBBH01160502;XR_001232986;XR_001232987;XR_260104 MODEL 8949222 trna Trnac-gca transfer RNA cysteine (anticodon GCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978833 AGCD01043512;AGCD01043513;AGCD01043523;AGCD01057606;AGCD01060445;AGCD01060446;AGCD01060454;AGCD01060455;AGCD01060458;AGCD01060459;AGCD01060460;AGCD01060462;AGCD01064185;AGCD01079692;AGCD01079693;AGCD01079767;AGCD01079768 MODEL 8911961 pseudo LOC102010093 ubiquitin carboxyl-terminal hydrolase isozyme L5 pseudogene NW_004955439 3610566 3611918 + 102010093 AGCD01035681 MODEL 8833772 protein-coding LOC102012075 cytochrome P450 4A6-like NW_004955464 11526301 11537560 + 102012075 AGCD01050155;GBBH01214054;XM_005398648;XM_013521715 XP_005398705;XP_013377169 MODEL 39132031 rrna 5S_rRNA 5S ribosomal RNA 8929949 protein-coding Cd3g CD3g molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); establishment or maintenance of cell polarity (ortholog); protein transport (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Diarrhea 9 (ortholog); diffuse alopecia areata (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); plasma membrane (ortholog) NW_004955412 19486066 19496474 + 102008927 AGCD01012954;AGCD01012955;AGCD01012956;GBBH01061598;XM_005378239 XP_005378296 MODEL 8794582 protein-coding Atp8b4 ATPase phospholipid transporting 8B4 (putative) ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) NW_004955409 4148110 4383309 + 102005446 AGCD01009280;AGCD01009281;AGCD01009282;AGCD01009283;AGCD01009284;AGCD01009285;AGCD01009286;AGCD01009287;GBBH01111267;XM_005376677;XM_013510346;XM_013510347;XM_013510348;XM_013510349;XM_013510350;XM_013510351;XM_013510352;XM_013510353;XM_013510354 XP_005376734;XP_013365800;XP_013365801;XP_013365802;XP_013365803;XP_013365804;XP_013365805;XP_013365806;XP_013365807;XP_013365808 MODEL 8829910 protein-coding Ankrd55 ankyrin repeat domain 55 ASSOCIATED WITH acute myeloid leukemia (ortholog); Chloracne (ortholog); hepatocellular carcinoma (ortholog) NW_004955446 11622317 11713690 + 102013227 AGCD01040208;AGCD01040209;GBDJ01034588;XM_005392685;XM_005392686;XM_005392687 XP_005392742;XP_005392743;XP_005392744 MODEL 8778609 protein-coding Fgl1 fibrinogen like 1 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cholesterol metabolic process (ortholog); hepatocyte proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955552 1784046 1813935 + 102022233 AGCD01072787;AGCD01072788;GBDF01111290;XM_005412199 XP_005412256 MODEL 39134053 misc_rna 7SK 7SK RNA 8882628 protein-coding Il17rb interleukin 17 receptor B INVOLVED IN positive regulation of inflammatory response (ortholog); positive regulation of interleukin-13 production (ortholog); positive regulation of interleukin-5 production (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955430 3831665 3847366 + 102004410 AGCD01029228;AGCD01029229;GBCQ01129637;XM_005387375 XP_005387432 MODEL 8935287 pseudo LOC102009717 cyclin-C-like NW_004955416 11195941 11196968 + 102009717 AGCD01017180;XR_260457 MODEL 10061161 ncrna LOC106150346 uncharacterized LOC106150346 NW_004955473 10878402 10891431 + 106150346 AGCD01054117;GBDJ01233778;XR_001237108 MODEL 8858932 protein-coding Sf3b6 splicing factor 3b subunit 6 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955469 6275894 6286908 - 102024444 AGCD01052376;AGCD01052377;GBCE01001807;XM_005400375 XP_005400432 MODEL 40834593 protein-coding C11orf80 chromosome 11 open reading frame 80 8886971 ncrna LOC102004111 uncharacterized LOC102004111 NW_004955434 23261266 23296395 + 102004111 AGCD01032700;AGCD01032701;GBDK01349819;XR_001234809;XR_001234810;XR_001234811;XR_001234812;XR_261646 MODEL 8983305 protein-coding LOC102022372 chromosome unknown open reading frame, human C6orf120 NW_004955411 3927722 3929720 - 102022372 AGCD01011562;GBDK01232050;XM_005377643;XM_005377644;XM_005377645 XP_005377700;XP_005377701;XP_005377702 MODEL 8747464 protein-coding Epm2a EPM2A glucan phosphatase, laforin ENCODES a protein that exhibits alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (ortholog); carbohydrate binding (ortholog); carbohydrate phosphatase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH cataract (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) NW_004955436 14925452 14982357 + 102005839 AGCD01033880;AGCD01033881;AGCD01033882;GBBH01222266;XM_005389308 XP_005389365 MODEL 8886433 protein-coding Apopt1 apoptogenic 1, mitochondrial INVOLVED IN intrinsic apoptotic signaling pathway (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); protein stabilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); agammaglobulinemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN matrix side of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955538 2415781 2432742 + 102011243 AGCD01071125;GBDF01003006;XM_005410782 XP_005410839 MODEL 9006859 ncrna LOC102003067 uncharacterized LOC102003067 NW_004955438 9649804 9652236 + 102003067 AGCD01035184;GBDF01148894;XR_261923 MODEL 39131838 rrna 5S_rRNA 5S ribosomal RNA 8820365 ncrna LOC102010095 uncharacterized LOC102010095 NW_004955440 18493660 18495295 + 102010095 AGCD01036610;GBDF01126738;XR_001235248 MODEL 8705224 protein-coding Alk ALK receptor tyrosine kinase ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN adult behavior (ortholog); brain development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anaplastic large cell lymphoma (ortholog); anxiety disorder (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955469 11049373 11751235 - 102019052 AGCD01052554;AGCD01052555;AGCD01052556;AGCD01052557;AGCD01052558;AGCD01052559;AGCD01052560;AGCD01052561;AGCD01052562;AGCD01052563;AGCD01052564;AGCD01052565;AGCD01052566;GBCQ01044578;XM_005400546 XP_005400603 MODEL 8984866 pseudo LOC102018302 nucleolar GTP-binding protein 2-like NW_004955423 15646160 15649256 - 102018302 AGCD01023812;AGCD01023813 MODEL 8932881 protein-coding Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN negative regulation of actin filament depolymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) NW_004955441 10818982 10921224 + 102025179 AGCD01037094;AGCD01037095;GBDF01083557;XM_005390924;XM_005390925;XM_005390927;XM_005390928;XM_005390929;XM_005390930;XM_005390931;XM_005390932;XM_005390933;XM_013517541;XR_262069 XP_005390981;XP_005390982;XP_005390984;XP_005390985;XP_005390986;XP_005390987;XP_005390988;XP_005390989;XP_005390990;XP_013372995 MODEL 8773969 ncrna LOC102011721 uncharacterized LOC102011721 NW_004955403 45969900 45972939 - 102011721 AGCD01002845;XR_259243 MODEL 9029342 protein-coding Bmp7 bone morphogenetic protein 7 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN allantois development (ortholog); anatomical structure formation involved in morphogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Acute Otitis Media (ortholog); atrial heart septal defect 8 (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); vesicle (ortholog) NW_004955445 2154057 2235594 + 102006504 AGCD01039351;GBDK01182189;XM_005392260 XP_005392317 MODEL 8953266 protein-coding Snx25 sorting nexin 25 ENCODES a protein that exhibits type I transforming growth factor beta receptor binding (ortholog); INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); receptor catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome (ortholog) NW_004955403 23678301 23787256 - 102028603 AGCD01002250;AGCD01002251;AGCD01002252;AGCD01002253;AGCD01002254;GBDK01250049;XM_005373470;XM_013512963;XM_013512965 XP_005373527;XP_013368417;XP_013368419 MODEL 8939359 protein-coding LOC102004484 olfactory receptor 13D1 NW_004955419 21750870 21752319 - 102004484 AGCD01020283;GBDJ01341197;XM_005382786 XP_005382843 MODEL 8866609 protein-coding Aggf1 angiogenic factor with G-patch and FHA domains 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955425 23847502 23873964 - 102018948 AGCD01025861;AGCD01025862;GBDI01125628;XM_005386032 XP_005386089 MODEL 8739921 protein-coding Cuta cutA divalent cation tolerance homolog ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) NW_004955437 1947139 1948657 - 102005747 AGCD01034245;GBDK01069771;XM_005389493;XM_005389494;XM_013516769 XP_005389550;XP_005389551;XP_013372223 MODEL 8716117 pseudo LOC102008549 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 pseudogene NW_004955495 3015938 3016703 + 102008549 AGCD01061815 MODEL 39133795 misc_rna 7SK 7SK RNA 8798465 protein-coding Sfi1 SFI1 centrin binding protein ENCODES a protein that exhibits phosphatase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955455 5667105 5744878 + 102012729 AGCD01045746;AGCD01045747;AGCD01045748;AGCD01045749;AGCD01045750;AGCD01045751;GBDK01319767;XM_005396332;XM_013520407;XM_013520408;XM_013520409;XM_013520410;XM_013520412;XM_013520413;XM_013520414;XM_013520415;XM_013520416;XM_013520417 XP_005396389;XP_013375861;XP_013375862;XP_013375863;XP_013375864;XP_013375866;XP_013375867;XP_013375868;XP_013375869;XP_013375870;XP_013375871 MODEL 8731351 protein-coding LOC102004875 PRAME family member 12-like NW_004955608 52750 55759 + 102004875 AGCD01076996;XM_005414909 XP_005414966 MODEL 15036857 trna Trnad-auc transfer RNA aspartic acid (anticodon AUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978828 8775747 pseudo LOC102013305 calcyclin-binding protein pseudogene NW_004955492 8003860 8004552 + 102013305 AGCD01060807 MODEL 39134179 misc_rna 7SK 7SK RNA 8717156 protein-coding LOC102007397 uncharacterized LOC102007397 NW_004955403 53982569 53983635 + 102007397 AGCD01003083;GBDK01203485;XM_005373841 XP_005373898 MODEL 8753508 pseudo LOC102013677 olfactory receptor 2L5-like NW_004955619 163965 164902 - 102013677 AGCD01077343 MODEL 39132032 rrna 5S_rRNA 5S ribosomal RNA 8992036 protein-coding Slc35b1 solute carrier family 35 member B1 ENCODES a protein that exhibits ATP:ADP antiporter activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955451 11870771 11877149 + 102023424 AGCD01043367;GBDF01050591;XM_005394207 XP_005394264 MODEL 8923083 protein-coding LOC102022374 caspase-4 NW_004955412 7744809 7814990 - 102022374 AGCD01012703;AGCD01012704;AGCD01012705;GBDI01278598;XM_005378000;XM_005378001;XM_005378002;XM_005378004;XM_013511166;XM_013511167;XM_013511168 XP_005378057;XP_005378058;XP_005378059;XP_005378061;XP_013366620;XP_013366621;XP_013366622 MODEL 9033623 protein-coding Cd4 CD4 molecule ENCODES a protein that exhibits coreceptor activity (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); cellular response to ionomycin (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute myeloid leukemia (ortholog); AIDS-Related Opportunistic Infections (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 4400326 4422110 + 102003427 AGCD01013613;GBDJ01136149;XM_005378829 XP_005378886 MODEL 8979212 protein-coding LOC102010872 zinc finger protein 14-like NW_004955457 13021955 13040077 - 102010872 AGCD01047034;AGCD01047035;GBDF01018457;XM_005397067 XP_005397124 MODEL 8824583 protein-coding Ankrd6 ankyrin repeat domain 6 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955411 16206819 16358322 + 102007415 AGCD01011970;AGCD01011971;AGCD01011972;AGCD01011973;GBDF01040122;XM_005377752;XM_005377754;XM_005377757;XM_013510762;XM_013510763;XM_013510764;XM_013510765;XM_013510766;XM_013510767;XM_013510768 XP_005377809;XP_005377811;XP_005377814;XP_013366216;XP_013366217;XP_013366218;XP_013366219;XP_013366220;XP_013366221;XP_013366222 MODEL 8879707 protein-coding Dmac2 distal membrane arm assembly component 2 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Mesothelioma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955555 362287 370276 - 102018992 AGCD01073024;AGCD01073025;GBDJ01091232;XM_005412352;XM_013508782 XP_005412409;XP_013364236 MODEL 39134054 misc_rna 7SK 7SK RNA 8806987 protein-coding Asxl3 ASXL transcriptional regulator 3 INVOLVED IN negative regulation of lipid biosynthetic process (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); allergic disease (ortholog); allergic rhinitis (ortholog) NW_004955402 20571209 20704480 + 102024293 AGCD01000578;AGCD01000579;GBDF01014157;XM_005372763;XM_005372764;XM_005372765;XM_013507996;XM_013508021 XP_005372820;XP_005372821;XP_005372822;XP_013363450;XP_013363475 MODEL 8905218 protein-coding Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif 17 ASSOCIATED WITH anterior segment dysgenesis (ortholog); brachydactyly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955416 27128066 27434826 - 102019062 AGCD01017610;AGCD01017611;AGCD01017612;AGCD01017613;AGCD01017614;AGCD01017615;GBCE01108669;GBDJ01093005;XM_013512522;XM_013512523 XP_013367976;XP_013367977 MODEL 8857812 protein-coding Wdr17 WD repeat domain 17 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955403 31559972 31658899 - 102017620 AGCD01002421;AGCD01002422;GBDK01228794;XM_005373519;XM_005373520;XM_005373521 XP_005373576;XP_005373577;XP_005373578 MODEL 8918032 protein-coding Cdk6 cyclin dependent kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cell dedifferentiation (ortholog); DNA damage response (ortholog); gliogenesis (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN centrosome (ortholog); cyclin D1-CDK6 complex (ortholog); cyclin D2-CDK6 complex (ortholog) NW_004955432 9521794 9727772 - 102006488 AGCD01030907;AGCD01030908;AGCD01030909;AGCD01030910;AGCD01030911;AGCD01030912;AGCD01030913;AGCD01030914;GBBH01096372;GBCE01129882;XM_005388024;XM_013516028 XP_005388081;XP_013371482 MODEL 39134362 misc_rna 7SK 7SK RNA 8872805 pseudo LOC102008185 ATP-dependent RNA helicase DDX3X-like NW_004955407 21081761 21090500 + 102008185 AGCD01007350 MODEL 10115528 ncrna LOC106150347 uncharacterized LOC106150347 NW_004955473 2713081 2793520 - 106150347 AGCD01053907;XR_001237110;XR_001237111 MODEL 8856906 ncrna LOC102012076 uncharacterized LOC102012076 NW_004955412 13025707 13029033 - 102012076 AGCD01012827;GBDF01049222;XR_259987 MODEL 9026807 protein-coding LOC102005915 translation initiation factor IF-2-like NW_004955465 13253449 13255976 - 102005915 AGCD01050595;GBDJ01330279;XM_005399010 XP_005399067 MODEL 8889702 protein-coding LOC102008930 cytospin-B NW_004955467 1024739 1302878 + 102008930 AGCD01051247;AGCD01051248;AGCD01051249;AGCD01051250;AGCD01051251;AGCD01051252;AGCD01051253;AGCD01051254;AGCD01051255;AGCD01051256;GBBH01086340;XM_005399302;XM_005399304;XM_013522196;XM_013522197;XM_013522198;XM_013522199;XM_013522200;XM_013522201;XM_013522202;XM_013522203;XM_013522204;XM_013522205 XP_005399359;XP_005399361;XP_013377650;XP_013377651;XP_013377652;XP_013377653;XP_013377654;XP_013377655;XP_013377656;XP_013377657;XP_013377658;XP_013377659 MODEL 8916289 protein-coding App amyloid beta precursor protein ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); apolipoprotein binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcoholic hepatitis (ortholog); FOUND IN amyloid-beta complex (ortholog); apical part of cell (ortholog); astrocyte projection (ortholog) NW_004955407 25725259 25973582 - 102019139 AGCD01007516;AGCD01007517;AGCD01007518;AGCD01007519;AGCD01007520;AGCD01007521;GBCE01002176;JN633556;XM_005375592;XM_005375593;XM_005375594;XM_005375595;XM_005375597;XM_005375598 AEO95223;XP_005375649;XP_005375650;XP_005375651;XP_005375652;XP_005375654;XP_005375655 MODEL 39133796 misc_rna 7SK 7SK RNA 9013733 protein-coding Cldn17 claudin 17 ENCODES a protein that exhibits channel activity (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN cellular respiration (ortholog); gene expression (ortholog); inflammatory response (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); tight junction (ortholog) NW_004955407 29519400 29520625 - 102028380 AGCD01007609;GBDI01212283;XM_005375623 XP_005375680 MODEL 8739493 protein-coding Rbp5 retinol binding protein 5 ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955413 4682477 4689949 - 102012622 AGCD01013624;GBDF01211758;XM_005378859 XP_005378916 MODEL 8799195 protein-coding LOC102013679 zinc finger protein OZF-like NW_004955656 47449 48378 - 102013679 AGCD01077846;XM_005415058 XP_005415115 MODEL 39132033 rrna 5S_rRNA 5S ribosomal RNA 8875574 protein-coding Il17rc interleukin 17 receptor C ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN defense response to fungus (ortholog); granulocyte chemotaxis (ortholog); interleukin-17A-mediated signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Candidiasis, Familial, 9 (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955561 1410100 1423041 + 102010952 AGCD01073855;GBCB01095866;XM_005413040;XM_005413041;XM_005413042;XM_005413044;XM_013509087;XM_013509088 XP_005413097;XP_005413098;XP_005413099;XP_005413101;XP_013364541;XP_013364542 MODEL 9020952 protein-coding Slc35b2 solute carrier family 35 member B2 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate transport (ortholog); 5'-adenylyl sulfate transmembrane transport (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hypomyelinating leukodystrophy 26 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955437 9878592 9882431 - 102020711 AGCD01034548;GBDI01256888;XM_005389810 XP_005389867 MODEL 8996930 protein-coding Plekhh3 pleckstrin homology, MyTH4 and FERM domain containing H3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955451 16523822 16531563 - 102028607 AGCD01043687;AGCD01043688;GBBH01062427;GBCB01003667;XM_013519145 XP_013374599 MODEL 9062535 protein-coding Ankrd60 ankyrin repeat domain 60 NW_004955445 1311078 1320906 + 102021811 AGCD01039337;GBDF01000243;XM_005392565 XP_005392622 MODEL 39131578 protein-coding C11orf96 chromosome 11 open reading frame 96 8969991 protein-coding LOC102007039 chromosome unknown open reading frame, human C4orf51 ASSOCIATED WITH stomach cancer (ortholog) NW_004955428 1503025 1543635 + 102007039 AGCD01027613;AGCD01027614;GBDF01008625;XM_005386650;XM_005386651;XM_005386652 XP_005386707;XP_005386708;XP_005386709 MODEL 8807231 protein-coding Epm2aip1 EPM2A interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of glycogen biosynthetic process (ortholog); response to insulin (ortholog); ASSOCIATED WITH hereditary nonpolyposis colorectal cancer type 2 (ortholog); Lynch syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); nucleus (ortholog) NW_004955421 3882486 3889851 - 102005049 AGCD01021672;GBDI01180311;XM_005383692 XP_005383749 MODEL 8879592 protein-coding LOC102014040 olfactory receptor 2D2 NW_004955414 22804933 22805880 - 102014040 AGCD01015478;XM_005380513 XP_005380570 MODEL 8822491 ncrna LOC102008554 uncharacterized LOC102008554 NW_004955425 10486431 10493561 + 102008554 AGCD01025446;GBDF01209722;XR_261137 MODEL 8800680 protein-coding Agk acylglycerol kinase ENCODES a protein that exhibits acylglycerol kinase activity (ortholog); ATP-dependent diacylglycerol kinase activity (ortholog); ceramide kinase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); lipid phosphorylation (ortholog); protein insertion into mitochondrial inner membrane (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); cataract 38 (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955494 1924026 2041914 - 102015858 AGCD01061429;AGCD01061430;AGCD01061431;AGCD01061432;AGCD01061433;AGCD01061434;GBCE01104960;XM_005405405;XM_005405406;XM_013504986;XM_013504987;XM_013504988 XP_005405462;XP_005405463;XP_013360440;XP_013360441;XP_013360442 MODEL 8796948 protein-coding Atp9a ATPase phospholipid transporting 9A ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN negative regulation of exosomal secretion (ortholog); neuron projection morphogenesis (ortholog); regulation of endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); late endosome (ortholog) NW_004955445 6876937 6991513 + 102018538 AGCD01039527;AGCD01039528;AGCD01039529;AGCD01039530;AGCD01039531;GBCB01044420;XM_005392293;XM_013518319;XM_013518320;XM_013518321 XP_005392350;XP_013373773;XP_013373774;XP_013373775 MODEL 8842893 protein-coding LOC102004876 PRAME family member 12-like NW_004955615 158242 175579 - 102004876 AGCD01077251;XM_005414982 XP_005415039 MODEL 8938719 ncrna LOC102007399 uncharacterized LOC102007399 NW_004955405 764142 804289 + 102007399 AGCD01004584;AGCD01004585;GBDF01014030;XR_259356;XR_259357 MODEL 39134180 misc_rna 7SK 7SK RNA 8949400 protein-coding LOC102013310 regenerating islet-derived protein 3-beta-like NW_004955424 7346797 7348894 + 102013310 AGCD01024435;GBDF01033597;XM_005385457;XM_005385458 XP_005385514;XP_005385515 MODEL 9046826 protein-coding LOC102018303 zinc finger protein 69-like NW_004955495 7428743 7464274 - 102018303 AGCD01062137;AGCD01062138;AGCD01062139;AGCD01062140;AGCD01062141;GBDF01077565;GBDF01187778;XM_013505355 XP_013360809 MODEL 8997274 protein-coding LOC102010097 keratin, type II cytoskeletal 6A-like NW_004955547 2793016 2797170 - 102010097 AGCD01072294;XM_013508500 XP_013363954 MODEL 8753175 protein-coding Dmac2l distal membrane arm assembly component 2 like ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); stomach cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 12473891 12485066 - 102024312 AGCD01009549;GBCB01056134;XM_005376828;XM_005376829;XM_013510335 XP_005376885;XP_005376886;XP_013365789 MODEL 8939628 protein-coding Cers2 ceramide synthase 2 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); gene expression (ortholog); glycosphingolipid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955588 338381 342139 - 102016540 AGCD01076105;GBCE01030942;GBDK01002537;XM_013509916 XP_013365370 MODEL 8823269 protein-coding Bmpr1a bone morphogenetic protein receptor type 1A ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); anti-Mullerian hormone receptor signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955510 5812571 5936312 + 102011346 AGCD01066293;AGCD01066294;AGCD01066295;AGCD01066296;AGCD01066297;GBBH01207322;GBBH01207324;XM_005407907 XP_005407964 MODEL 8814745 protein-coding Rrh retinal pigment epithelium-derived rhodopsin homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lymphoma (ortholog) NW_004955496 460094 473007 - 102028554 AGCD01062228;XM_005406281 XP_005406338 MODEL 8999630 protein-coding Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); transposable element silencing (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); spermatogenic failure 57 (ortholog); FOUND IN cytoplasm (ortholog); pi-body (ortholog) NW_004955432 23059462 23119421 - 102016186 AGCD01031274;AGCD01031275;AGCD01031276;GBDF01222043;XM_005388135 XP_005388192 MODEL 8815764 protein-coding Cblif cobalamin binding intrinsic factor ENCODES a protein that exhibits cargo receptor ligand activity (ortholog); cobalamin binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN cobalamin transport (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); congenital intrinsic factor deficiency (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); extracellular region (ortholog) NW_004955511 4234470 4251583 - 102013320 AGCD01066496;GBDI01027880;XM_005408068;XM_005408071;XM_005408072;XM_013506347;XM_013506348 XP_005408125;XP_005408128;XP_005408129;XP_013361801;XP_013361802 MODEL 39134363 misc_rna 7SK 7SK RNA 8868564 ncrna LOC102003068 uncharacterized LOC102003068 NW_004955439 1703273 1722660 - 102003068 AGCD01035626;GBDF01124953;XR_001235210;XR_261961 MODEL 9029091 protein-coding Acbd4 acyl-CoA binding domain containing 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955451 17833985 17840071 + 102024637 AGCD01043775;AGCD01043776;GBDI01062558;XM_005394568;XM_005394569;XM_005394570;XM_005394571;XM_005394572 XP_005394625;XP_005394626;XP_005394627;XP_005394628;XP_005394629 MODEL 8957778 trna Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978829 AGCD01005333;AGCD01005375;AGCD01023470;AGCD01049456;AGCD01050593;AGCD01051466;AGCD01057309 MODEL 8805200 protein-coding Cutc cutC copper transporter ENCODES a protein that exhibits copper ion binding (ortholog); INVOLVED IN protein tetramerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955507 5617595 5664131 + 102016622 AGCD01065680;AGCD01065681;AGCD01065682;AGCD01065683;AGCD01065684;GBDF01308367;XM_005407673;XM_005407674;XM_005407675;XM_005407676;XM_013506197;XM_013506198;XR_001231629;XR_001231630 XP_005407730;XP_005407731;XP_005407732;XP_005407733;XP_013361651;XP_013361652 MODEL 8967823 protein-coding Sfmbt1 Scm like with four mbt domains 1 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of muscle organ development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 2850149 3014859 - 102027772 AGCD01029182;AGCD01029183;AGCD01029184;AGCD01029185;AGCD01029186;AGCD01029187;GBBH01041099;GBDF01043456;XM_013515695;XM_013515696 XP_013371149;XP_013371150 MODEL 8717850 protein-coding Fgl2 fibrinogen like 2 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of dendritic cell antigen processing and presentation (ortholog); negative regulation of macrophage antigen processing and presentation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autoimmune glomerulonephritis (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog) NW_004955410 7899263 7903499 + 102010979 AGCD01010726;GBCE01075859;GBDF01281505;XM_005377557 XP_005377614 MODEL 8719073 protein-coding Alkal2 ALK and LTK ligand 2 ENCODES a protein that exhibits cytokine activity (ortholog); receptor signaling protein tyrosine kinase activator activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955487 304019 312577 - 102005811 AGCD01059216;AGCD01059217;GBCB01076160;XM_005404337 XP_005404394 MODEL 8766946 pseudo LOC102012078 ETS translocation variant 5 pseudogene NW_004955412 6032104 6035073 + 102012078 AGCD01012664 MODEL 8796917 protein-coding Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); enzyme binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN apical plasma membrane (ortholog); cAMP-dependent protein kinase complex (ortholog); cytoplasm (ortholog) NW_004955568 1253331 1279761 + 102015995 AGCD01074543;GBDF01307774;XM_005413470 XP_005413527 MODEL 39133797 misc_rna 7SK 7SK RNA 8738801 pseudo LOC102004115 ferritin heavy chain pseudogene NW_004955535 3341451 3342152 + 102004115 AGCD01070692;XM_005410497 MODEL 39134055 misc_rna 7SK 7SK RNA 8740316 pseudo LOC102004485 40S ribosomal protein S14 pseudogene NW_004955484 6819345 6824612 + 102004485 AGCD01058294 MODEL 8952983 protein-coding Cd40 CD40 molecule ENCODES a protein that exhibits antigen binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell mediated immunity (ortholog); CD40 signaling pathway (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myocarditis (ortholog); allergic rhinitis (ortholog); FOUND IN CD40 receptor complex (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955445 11191817 11202156 - 102021289 AGCD01039683;GBDJ01180170;XM_005392385;XM_013518290 XP_005392442;XP_013373744 MODEL 9014651 ncrna LOC102009719 uncharacterized LOC102009719 NW_004955482 6560784 6566698 + 102009719 AGCD01057403;GBDF01126264;XR_001230965 MODEL 8772337 protein-coding Snx27 sorting nexin 27 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endosome (ortholog) NW_004955589 719892 799367 - 102019344 AGCD01076181;AGCD01076182;AGCD01076183;GBCQ01062668;XM_005414566;XM_005414567;XM_005414568 XP_005414623;XP_005414624;XP_005414625 MODEL 8822652 protein-coding Wdr18 WD repeat domain 18 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 6869543 6877058 - 102014147 AGCD01062099;GBCQ01121381;XM_005406002 XP_005406059 MODEL 9030185 protein-coding Slc35b3 solute carrier family 35 member B3 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity (ortholog); INVOLVED IN 5'-adenylyl sulfate transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); trans-Golgi network (ortholog) NW_004955465 5599728 5621031 + 102023884 AGCD01050431;GBDF01010803;XM_005398841;XM_005398842;XM_005398843 XP_005398898;XP_005398899;XP_005398900 MODEL 8989088 protein-coding Cdk7 cyclin dependent kinase 7 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN positive regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog) NW_004955446 54401 87884 + 102008161 AGCD01039922;AGCD01039923;AGCD01039924;AGCD01039925;AGCD01039926;GBDF01121523;XM_005392592;XM_013518419 XP_005392649;XP_013373873 MODEL 39131839 rrna 5S_rRNA 5S ribosomal RNA 8877072 protein-coding LOC102008186 gamma-crystallin B NW_004955457 6977737 6979696 + 102008186 AGCD01046862;XM_005396970 XP_005397027 MODEL 8962766 protein-coding Plekhj1 pleckstrin homology domain containing J1 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955495 5904410 5907211 + 102017470 AGCD01062043;GBDF01082206;XM_005405916 XP_005405973 MODEL 8720375 pseudo LOC102005916 COMM domain-containing protein 8 pseudogene NW_004955466 2360352 2361351 - 102005916 AGCD01050734 MODEL 8994900 ncrna LOC102008932 uncharacterized LOC102008932 NW_004955468 2457664 2458509 + 102008932 AGCD01051818;GBDK01424972;XR_263377 MODEL 8787777 gene LOC102010877 T-cell receptor alpha chain V region HPB-MLT-like NW_004955409 38439384 38453331 - 102010877 AGCD01010560;XR_259812 MODEL 8784296 ncrna LOC102011725 uncharacterized LOC102011725 NW_004955404 11149721 11163056 - 102011725 AGCD01003414;AGCD01003415;GBDF01148811;XR_259301 MODEL 9022861 pseudo LOC102013685 alpha-endosulfine pseudogene NW_004955405 26387436 26387776 - 102013685 AGCD01005201 MODEL 39134181 misc_rna 7SK 7SK RNA 39132034 rrna 5S_rRNA 5S ribosomal RNA 8849903 protein-coding Cldn18 claudin 18 INVOLVED IN cellular response to estrogen stimulus (ortholog); digestive tract development (ortholog); epithelial cell proliferation (ortholog); ASSOCIATED WITH asthma (ortholog); clear cell renal cell carcinoma (ortholog); megacolon (ortholog); FOUND IN cell-cell junction (ortholog); lateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955501 962188 991922 - 102011135 AGCD01064043;GBDK01013094;XM_005406751;XM_005406752 XP_005406808;XP_005406809 MODEL 8899036 pseudo LOC102007401 zinc finger MYM-type protein 5-like NW_004955452 14055063 14061537 + 102007401 AGCD01044449 MODEL 8720467 protein-coding Il17rd interleukin 17 receptor D INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); arteriovenous malformations of the brain (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955430 6842756 6873195 - 102013322 AGCD01029316;GBDK01095576;GBDK01353156;XM_013515704 XP_013371158 MODEL 8827924 protein-coding Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif 18 INVOLVED IN eye development (ortholog); negative regulation of platelet aggregation (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); astigmatism (ortholog); autism spectrum disorder (ortholog) NW_004955522 530752 666752 - 102006602 AGCD01068347;AGCD01068348;AGCD01068349;GBCE01042223;GBCQ01172399;XM_013507112 XP_013362566 MODEL 8881796 pseudo LOC102004117 period circadian protein homolog 3-like NW_004955437 138520 142991 + 102004117 AGCD01034105 MODEL 39131365 protein-coding C13orf42 chromosome 13 open reading frame 42 10197959 ncrna LOC106150348 uncharacterized LOC106150348 NW_004955473 5124678 5163502 + 106150348 AGCD01053967;AGCD01053968;AGCD01053969;AGCD01053970;AGCD01053971;XR_001237115 MODEL 9023985 pseudo LOC102007040 olfactory receptor 13A1-like NW_004955507 6432557 6457489 + 102007040 AGCD01065716;AGCD01065717 MODEL 39134364 misc_rna 7SK 7SK RNA 8782854 ncrna LOC102014043 uncharacterized LOC102014043 NW_004955416 14532238 14541580 + 102014043 AGCD01017276;GBDK01284550;XR_260383 MODEL 8799359 pseudo LOC102022375 putative olfactory receptor 10D4 NW_004955412 24725544 24726480 + 102022375 AGCD01013124 MODEL 8771879 protein-coding Epn1 epsin 1 ENCODES a protein that exhibits molecular sequestering activity (ortholog); transcription factor binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); embryonic organ development (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955567 669333 683283 - 102013769 AGCD01074423;AGCD01074424;GBCE01052885;GBCQ01011760;XM_005413292 XP_005413349 MODEL 8885463 protein-coding Appbp2 amyloid beta precursor protein binding protein 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of beige fat cell differentiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasmic vesicle membrane (ortholog); membrane (ortholog) NW_004955451 1736742 1804776 - 102007840 AGCD01042981;AGCD01042982;AGCD01042983;AGCD01042984;AGCD01042985;AGCD01042986;AGCD01042987;GBDJ01006787;XM_005393963 XP_005394020 MODEL 8789152 protein-coding LOC102004878 transcription initiation factor TFIID subunit 3-like NW_004955761 1438 19347 - 102004878 AGCD01078303;GBCB01040970;GBDK01318503;XM_005415095 XP_005415152 MODEL 8809712 protein-coding Sfmbt2 Scm like with four mbt domains 2 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 23691648 23913781 - 102006670 AGCD01022193;AGCD01022194;AGCD01022195;AGCD01022196;AGCD01022197;AGCD01022198;AGCD01022199;GBDI01384258;XM_005383870;XM_005383871;XM_013513767;XM_013513768;XM_013513769;XM_013513771;XM_013513772;XM_013513773 XP_005383927;XP_005383928;XP_013369221;XP_013369222;XP_013369223;XP_013369225;XP_013369226;XP_013369227 MODEL 8735085 ncrna LOC102013311 uncharacterized LOC102013311 NW_004955499 2225788 2230856 + 102013311 AGCD01063428;GBDK01220024;XR_001231465 MODEL 9032987 ncrna LOC102010099 uncharacterized LOC102010099 NW_004955558 861760 862614 + 102010099 AGCD01073396;GBDJ01283073;XR_001232330 MODEL 8897770 protein-coding Rbpj recombination signal binding protein for immunoglobulin kappa J region ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve development (ortholog); arterial endothelial cell fate commitment (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver syndrome 3 (ortholog); aortic valve disease (ortholog); FOUND IN CSL-Notch-Mastermind transcription factor complex (ortholog); cytoplasm (ortholog); MAML1-RBP-Jkappa- ICN1 complex (ortholog) NW_004955443 18783061 19029441 - 102017716 AGCD01038610;AGCD01038611;AGCD01038612;AGCD01038613;AGCD01038614;AGCD01038615;AGCD01038616;GBCQ01095808;XM_005392029;XM_005392030;XM_013518082;XM_013518083;XM_013518084;XM_013518085 XP_005392086;XP_005392087;XP_013373536;XP_013373537;XP_013373538;XP_013373539 MODEL 8753956 protein-coding Cers3 ceramide synthase 3 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); cornification (ortholog); epidermis development (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 9 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nucleoplasm (ortholog) NW_004955416 27461950 27577145 - 102007994 AGCD01017616;AGCD01017617;AGCD01017618;GBCC01014821;XM_005381640;XM_005381641;XM_013512586;XM_013512587 XP_005381697;XP_005381698;XP_013368040;XP_013368041 MODEL 8895723 ncrna LOC102013686 uncharacterized LOC102013686 NW_004955405 33571418 33600240 + 102013686 AGCD01005360;GBDF01238801;XR_259425;XR_259426 MODEL 8871233 pseudo LOC102011727 GTP:AMP phosphotransferase AK3, mitochondrial-like NW_004955404 141224 156690 - 102011727 AGCD01003197 MODEL 39134182 misc_rna 7SK 7SK RNA 8824381 protein-coding Atad1 ATPase family AAA domain containing 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN extraction of mislocalized protein from mitochondrial outer membrane (ortholog); learning (ortholog); memory (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH genetic disease (ortholog); hyperekplexia 4 (ortholog); lung cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955425 5118107 5180578 + 102025703 AGCD01025335;GBDF01002165;XM_005385882;XM_005385883;XM_005385884;XM_005385885;XM_013514805;XM_013514806 XP_005385939;XP_005385940;XP_005385941;XP_005385942;XP_013370259;XP_013370260 MODEL 8738003 ncrna LOC102008558 uncharacterized LOC102008558 NW_004955430 15103778 15104993 + 102008558 AGCD01029588;GBDF01089462;XR_261428 MODEL 9007603 protein-coding LOC102003071 vomeronasal type-1 receptor 4-like NW_004955558 653203 654063 + 102003071 AGCD01073381;XM_005412739 XP_005412796 MODEL 8993925 trna Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955418;NW_004955445;NW_004955465 63038;29926685;16045097;13921469 63109;29926756;16045169;13921540 -;+;+;+ 101978831 AGCD01019491;AGCD01039863;AGCD01050636;AGCD01074502 MODEL 8808717 protein-coding Cdk8 cyclin dependent kinase 8 ENCODES a protein that exhibits protein kinase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of triglyceride metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN CKM complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); mediator complex (ortholog) NW_004955497 5781237 5908072 + 102027759 AGCD01062615;AGCD01062616;AGCD01062617;GBCE01085457;GBDI01224913;XM_005406344 XP_005406401 MODEL 8860335 protein-coding Atp9b ATPase phospholipid transporting 9B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) NW_004955402 62231875 62537311 + 102022987 AGCD01001637;AGCD01001638;AGCD01001639;AGCD01001640;AGCD01001641;AGCD01001642;AGCD01001643;GBDF01045223;XM_005373105;XM_005373106;XM_005373107 XP_005373162;XP_005373163;XP_005373164 MODEL 8939400 protein-coding Fgr FGR proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits Fc-gamma receptor I complex binding (ortholog); immunoglobulin receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN bone mineralization (ortholog); defense response to Gram-positive bacterium (ortholog); integrin-mediated signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); plasma membrane (ortholog) NW_004955452 6840274 6863460 - 102007181 AGCD01044127;GBDJ01006866;XM_005394919;XM_005394920;XM_005394921;XM_005394922;XM_013519583;XM_013519584 XP_005394976;XP_005394977;XP_005394978;XP_005394979;XP_013375037;XP_013375038 MODEL 9005513 protein-coding Prkaca protein kinase cAMP-activated catalytic subunit alpha ENCODES a protein that exhibits ATP binding (ortholog); cAMP-dependent protein kinase activity (ortholog); histone H1-4S35 kinase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); bone resorption (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH adrenal cortical adenoma (ortholog); Adrenal Gland Neoplasms (ortholog); amphetamine abuse (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog) NW_004955415 32794172 32807944 - 102010480 AGCD01016734;GBDK01132638;XM_013512354 XP_013367808 MODEL 8703225 protein-coding Alkbh1 alkB homolog 1, histone H2A dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent tRNA 5-methylcytidine formyltransferase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); INVOLVED IN DNA repair (ortholog); oxidative RNA demethylation (ortholog); positive regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 1531114 1556483 - 102019107 AGCD01034986;GBDK01361284;XM_005390212;XM_013517181 XP_005390269;XP_013372635 MODEL 8729461 protein-coding LOC102008935 tripartite motif-containing protein 5-like NW_004955414 21565273 21579442 - 102008935 AGCD01015423;GBDI01215630;XM_013512005;XM_013512006 XP_013367459;XP_013367460 MODEL 8852997 protein-coding Cux1 cut like homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN inner ear auditory receptor cell differentiation (ortholog); kidney development (ortholog); lung development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); apraxia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955456 15292562 15636835 - 102018803 AGCD01046667;AGCD01046668;AGCD01046669;AGCD01046670;AGCD01046671;GBCB01021487;GBDJ01094797;XM_013520550 XP_013376004 MODEL 9041799 protein-coding LOC102012087 interferon-induced very large GTPase 1-like NW_004955414 22472329 22477687 - 102012087 AGCD01015457;XM_005380508 XP_005380565 MODEL 8718506 pseudo LOC102010880 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial pseudogene NW_004955410 29866734 29868389 - 102010880 AGCD01011297 MODEL 8772698 ncrna LOC102018304 uncharacterized LOC102018304 NW_004955424 21693778 21701536 - 102018304 AGCD01024903;GBBH01046018;XR_261096 MODEL 8773277 protein-coding Dmap1 DNA methyltransferase 1 associated protein 1 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of protein import into nucleus (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cognitive Dysfunction (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NuA4 histone acetyltransferase complex (ortholog) NW_004955464 13984748 13993411 - 102018699 AGCD01050298;GBCQ01093703;XM_005398766 XP_005398823 MODEL 8862927 ncrna LOC102004486 uncharacterized LOC102004486 NW_004955485 7084159 7094302 - 102004486 AGCD01058634;GBBH01225878;XR_001231087;XR_001231088;XR_263915 MODEL 8732225 protein-coding Cd40lg CD40 ligand ENCODES a protein that exhibits CD40 receptor binding (ortholog); cytokine activity (ortholog); integrin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); CD40 signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; obesity pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) NW_004955489 8465571 8477714 - 102012438 AGCD01060018;GBDK01262763;XM_005404587 XP_005404644 MODEL 8703813 protein-coding Bmpr1b bone morphogenetic protein receptor type 1B ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acromesomelic dysplasia 3 (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog); asthma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955405 5408171 5784930 + 102013791 AGCD01004682;AGCD01004683;AGCD01004684;AGCD01004685;AGCD01004686;AGCD01004687;GBDI01326385;XM_013517414;XM_013517415;XM_013517416;XM_013517418;XM_013517428;XM_013517431;XM_013517434;XM_013517436;XM_013517437 XP_013372868;XP_013372869;XP_013372870;XP_013372872;XP_013372882;XP_013372885;XP_013372888;XP_013372890;XP_013372891 MODEL 9014656 protein-coding LOC102009720 olfactory receptor 2AJ1-like NW_004955418 30036459 30037427 - 102009720 AGCD01019499;XM_005382364 XP_005382421 MODEL 8876913 protein-coding Slc35b4 solute carrier family 35 member B4 ENCODES a protein that exhibits UDP-N-acetylglucosamine transmembrane transporter activity (ortholog); UDP-xylose transmembrane transporter activity (ortholog); INVOLVED IN regulation of gluconeogenesis (ortholog); UDP-N-acetylglucosamine transmembrane transport (ortholog); UDP-xylose transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955410 33695985 33728749 + 102004149 AGCD01011380;AGCD01011381;AGCD01011382;AGCD01011383;AGCD01011384;GBDF01160017;XM_005377537 XP_005377594 MODEL 8922090 protein-coding LOC102004123 CMRF35-like molecule NW_004955553 1403860 1424555 - 102004123 AGCD01072881;XM_013508611 XP_013364065 MODEL 8880653 protein-coding Cldn19 claudin 19 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); apical junction assembly (ortholog); cell junction assembly (ortholog); ASSOCIATED WITH body dysmorphic disorder (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical junction complex (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955537 2265711 2271096 - 102014606 AGCD01070921;GBCQ01010369;XM_005410615;XM_005410616 XP_005410672;XP_005410673 MODEL 39131840 rrna 5S_rRNA 5S ribosomal RNA 8959830 ncrna LOC102007041 uncharacterized LOC102007041 NW_004955429 13140112 13203078 + 102007041 AGCD01028736;AGCD01028737;GBDF01304725;XR_261328 MODEL 9058534 protein-coding Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif 19 INVOLVED IN aortic valve morphogenesis (ortholog); collagen fibril organization (ortholog); mitral valve morphogenesis (ortholog); ASSOCIATED WITH aortic valve disease (ortholog); bicuspid aortic valve disease (ortholog); CARDIAC VALVULAR DYSPLASIA 2 (ortholog) NW_004955415 2384530 2617454 + 102008401 AGCD01015904;AGCD01015905;AGCD01015906;AGCD01015907;GBCB01066284;XM_005380553;XM_005380554;XM_005380555 XP_005380610;XP_005380611;XP_005380612 MODEL 8823654 protein-coding Plekhm1 pleckstrin homology and RUN domain containing M1 INVOLVED IN autophagosome-lysosome fusion (ortholog); late endosome to lysosome transport (ortholog); lysosome localization (ortholog); ASSOCIATED WITH Autosomal Dominant Osteopetrosis 3 (ortholog); autosomal recessive osteopetrosis 1 (ortholog); autosomal recessive osteopetrosis 6 (ortholog); FOUND IN autolysosome (ortholog); autolysosome membrane (ortholog); endosome membrane (ortholog) NW_004955451 18043194 18079808 - 102027259 AGCD01043790;GBDI01179295;XM_005394577;XM_013519289;XM_013519290;XM_013519291;XM_013519292;XM_013519293;XM_013519294;XM_013519295;XM_013519296 XP_005394634;XP_013374743;XP_013374744;XP_013374745;XP_013374746;XP_013374747;XP_013374748;XP_013374749;XP_013374750 MODEL 8975208 protein-coding Agl amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase ENCODES a protein that exhibits 4-alpha-glucanotransferase activity (ortholog); amylo-alpha-1,6-glucosidase activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen degradation pathway; glycogen storage disease type III pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); inclusion body (ortholog) NW_004955435 4622142 4684439 + 102030231 AGCD01032838;AGCD01032839;GBCB01003861;GBCQ01179765;XM_013516512 XP_013371966 MODEL 39134056 misc_rna 7SK 7SK RNA 8764256 pseudo LOC102008936 glycoprotein endo-alpha-1,2-mannosidase pseudogene NW_004955414 9246135 9247353 + 102008936 AGCD01015014 MODEL 8860154 protein-coding Rrm1 ribonucleotide reductase catalytic subunit M1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); purine nucleotide binding (ortholog); INVOLVED IN 2'-deoxyribonucleotide biosynthetic process (ortholog); cell proliferation in forebrain (ortholog); deoxyribonucleotide biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); Animal Disease Models (ortholog); autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 6 (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 19850523 19904879 + 102012526 AGCD01015339;AGCD01015340;AGCD01015341;GBBH01011845;XM_005380041 XP_005380098 MODEL 39132035 rrna 5S_rRNA 5S ribosomal RNA 8724293 protein-coding Sfn stratifin ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein binding (ortholog); phosphoserine residue binding (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); establishment of skin barrier (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH endometrial carcinoma (ortholog); Esophageal Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955452 6217519 6218481 + 102024419 AGCD01044097;GBDJ01006661;XM_005394883 XP_005394940 MODEL 9002952 pseudo LOC102007410 non-histone chromosomal protein HMG-14 pseudogene NW_004955459 7208563 7208865 + 102007410 AGCD01048098 MODEL 39134183 misc_rna 7SK 7SK RNA 8828715 ncrna LOC102005921 uncharacterized LOC102005921 NW_004955468 5830269 5849954 + 102005921 AGCD01051978;GBDF01113513;XR_263392 MODEL 10205732 ncrna LOC106150349 uncharacterized LOC106150349 NW_004955406 42051672 42055469 - 106150349 AGCD01006696;GBDI01085493;XR_001237116 MODEL 8790788 ncrna LOC102022380 uncharacterized LOC102022380 NW_004955471 5650960 5654958 + 102022380 AGCD01053108;GBDF01013412;XR_263524 MODEL 8757974 protein-coding Atad2 ATPase family AAA domain containing 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955540 2166708 2228077 - 102030567 AGCD01071316;GBCQ01151375;XM_005410928;XM_013507927 XP_005410985;XP_013363381 MODEL 8933691 protein-coding Slc35c1 solute carrier family 35 member C1 ENCODES a protein that exhibits GDP-fucose transmembrane transporter activity (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-fucose import into Golgi lumen (ortholog); GDP-L-fucose salvage (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); congenital disorder of glycosylation type IIc (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955422 2130561 2139145 - 102019508 AGCD01022480;AGCD01022481;GBDK01090342;XM_005384067;XM_005384068;XM_005384069;XM_005384070 XP_005384124;XP_005384125;XP_005384126;XP_005384127 MODEL 8957780 protein-coding Epn2 epsin 2 INVOLVED IN embryonic organ development (ortholog); in utero embryonic development (ortholog); negative regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN clathrin coat of endocytic vesicle (ortholog); cytoplasm (ortholog); postsynaptic endocytic zone (ortholog) NW_004955467 419342 505909 - 102003745 AGCD01051219;AGCD01051220;AGCD01051221;AGCD01051222;AGCD01051223;GBCB01023639;XM_005399274;XM_005399276;XM_005399277 XP_005399331;XP_005399333;XP_005399334 MODEL 8847297 protein-coding Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955430 6986977 7018938 + 102014270 AGCD01029331;GBCB01040671;GBDJ01235305;XM_005387408 XP_005387465 MODEL 8797419 protein-coding LOC102004879 lysozyme C NW_004957064 526 1868 - 102004879 AGCD01080460;GBCE01006950;GBDK01017882;XM_005415221 XP_005415278 MODEL 8887156 protein-coding LOC102014046 cytochrome c oxidase subunit 6C ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955417 15230562 15241610 - 102014046 AGCD01018224;AGCD01018225;GBDK01016142;XM_005381859 XP_005381916 MODEL 41410888 protein-coding C16orf87 chromosome 16 open reading frame 87 8890509 pseudo LOC102012089 serine racemase pseudogene NW_004955475 6283187 6284059 - 102012089 AGCD01054958 MODEL 8862647 protein-coding Snx29 sorting nexin 29 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955442 6082362 6607440 - 102023201 AGCD01037580;AGCD01037581;AGCD01037582;AGCD01037583;AGCD01037584;AGCD01037585;AGCD01037586;AGCD01037587;AGCD01037588;AGCD01037589;AGCD01037590;GBDF01272494;XM_005391150;XM_013517836 XP_005391207;XP_013373290 MODEL 8742801 protein-coding Cbll1 Cbl proto-oncogene like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); mRNA processing (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955410 12078448 12093641 + 102006988 AGCD01010844;GBDF01189707;XM_005377287;XM_005377288;XM_013510644;XM_013510645 XP_005377344;XP_005377345;XP_013366098;XP_013366099 MODEL 8801756 protein-coding Wdr19 WD repeat domain 19 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cilium assembly (ortholog); digestive system development (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle A (ortholog); motile cilium (ortholog) NW_004955443 8053847 8122918 - 102028692 AGCD01038308;AGCD01038309;AGCD01038310;GBCQ01123355;XM_005391986 XP_005392043 MODEL 9009813 ncrna LOC102013687 uncharacterized LOC102013687 NW_004955453 15052596 15057088 + 102013687 AGCD01044881;GBDF01288060;XR_001236182 MODEL 8978234 ncrna LOC102004490 uncharacterized LOC102004490 NW_004955421 23169752 23183018 + 102004490 AGCD01022173;GBDF01042502;XR_260816 MODEL 8789782 protein-coding LOC102008188 core histone macro-H2A.1 ENCODES a protein that exhibits ADP-D-ribose binding (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA repair (ortholog); dosage compensation by inactivation of X chromosome (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN Barr body (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955408 30497531 30550095 - 102008188 AGCD01008809;AGCD01008810;GBBH01000865;GBDK01090820;XM_005376471 XP_005376528 MODEL 39134365 misc_rna 7SK 7SK RNA 8728967 ncrna LOC102011728 uncharacterized LOC102011728 NW_004955405 4802647 4833270 - 102011728 AGCD01004653;AGCD01004654;AGCD01004655;GBDF01208522;XR_001235207;XR_259362 MODEL 8878648 protein-coding LOC102009721 chromosome unknown open reading frame, human C6orf62 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog) NW_004955483 2346246 2358156 + 102009721 AGCD01057674;AGCD01057675;GBDF01209925;XM_005403364;XM_005403365 XP_005403421;XP_005403422 MODEL 8783693 protein-coding Cers4 ceramide synthase 4 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); sphingolipid biosynthetic process (ortholog); sphingomyelin biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955563 1100410 1105662 - 102016111 AGCD01074114;AGCD01074115;GBBH01025992;GBDF01079030;XM_013509155 XP_013364609 MODEL 8913323 protein-coding Cd44 CD44 molecule (IN blood group) ENCODES a protein that exhibits cargo receptor activity (ortholog); cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN blood vessel maturation (ortholog); branching involved in prostate gland morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955422 11106061 11189951 - 102010173 AGCD01022750;AGCD01022751;EU366974;GBCQ01036797;XM_005384129;XM_005384131;XM_005384132;XM_005384133;XM_005384134;XM_005384135;XM_013514145;XM_013514146;XM_013514147;XM_013514148;XM_013514149;XM_013514150 ACA62714;XP_005384186;XP_005384188;XP_005384189;XP_005384190;XP_005384191;XP_005384192;XP_013369599;XP_013369600;XP_013369601;XP_013369602;XP_013369603;XP_013369604 MODEL 9048342 protein-coding LOC102003076 EKC/KEOPS complex subunit LAGE3-like NW_004955585 16414 18078 + 102003076 AGCD01075989;AGCD01075990;GBDF01011008;XM_005414424;XM_005414425 XP_005414481;XP_005414482 MODEL 8700292 protein-coding Bmpr2 bone morphogenetic protein receptor type 2 ENCODES a protein that exhibits activin receptor activity, type II (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); aortic valve development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955457 12235780 12315680 - 102004042 AGCD01047005;AGCD01047006;GBCB01060551;GBDF01280157;XM_013520738 XP_013376192 MODEL 8699520 trna Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955518;NW_004955533;NW_004955404;NW_004955468;NW_004955467 2739880;3278389;51044487;13117506;8514521 2739951;3278460;51044558;13117577;8514592 -;+;-;+;+ 101978830 AGCD01004542;AGCD01051452;AGCD01052199;AGCD01067784;AGCD01070411 MODEL 39134184 misc_rna 7SK 7SK RNA 9042778 protein-coding Cdk9 cyclin dependent kinase 9 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); host-mediated activation of viral transcription (ortholog); negative regulation of protein localization to chromatin (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); nucleus (ortholog); P-TEFb complex (ortholog) NW_004955419 874959 883160 - 102026114 AGCD01019620;GBCB01061025;GBCE01077384;XM_005382409 XP_005382466 MODEL 8946333 protein-coding Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif 2 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); lung development (ortholog); protein processing (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955408 1157826 1367146 + 102006981 AGCD01007952;AGCD01007953;AGCD01007954;AGCD01007955;GBBH01172277;XM_013507291 XP_013362745 MODEL 10073913 protein-coding Ankrd61 ankyrin repeat domain 61 FOUND IN nucleoplasm (ortholog) NW_004955460 13744482 13748863 - 106149991 AGCD01048722;GBDF01043667;XM_013521109 XP_013376563 MODEL 8942549 protein-coding Alkbh2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); cytosine C-5 DNA demethylase activity (ortholog); INVOLVED IN DNA alkylation repair (ortholog); ASSOCIATED WITH high grade glioma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 10258736 10265100 - 102030040 AGCD01045950;GBDJ01275521;XM_013520492 XP_013375946 MODEL 8879595 protein-coding Atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 ENCODES a protein that exhibits protein-containing complex stabilizing activity (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955464 11659761 11682651 + 102014431 AGCD01050160;GBDF01001378;XM_005398657;XM_005398659;XM_005398660;XM_005398661;XM_005398662;XM_005398663;XM_013521633;XR_001236686 XP_005398714;XP_005398716;XP_005398717;XP_005398718;XP_005398719;XP_005398720;XP_013377087 MODEL 8920903 pseudo LOC102013317 eukaryotic initiation factor 4A-I-like NW_004955428 6591052 6624236 - 102013317 AGCD01027743;AGCD01027744 MODEL 8980969 protein-coding Slc35d1 solute carrier family 35 member D1 ENCODES a protein that exhibits antiporter activity (ortholog); pyrimidine nucleotide-sugar transmembrane transporter activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); embryonic skeletal system development (ortholog); pyrimidine nucleotide-sugar transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955423 23945729 23969929 + 102016614 AGCD01024026;AGCD01024027;GBBH01050955;GBCE01009175;XM_005385278;XM_013514495 XP_005385335;XP_013369949 MODEL 8776302 protein-coding Plekhm2 pleckstrin homology and RUN domain containing M2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN Golgi organization (ortholog); lysosome localization (ortholog); natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955527 2438595 2453120 - 102010404 AGCD01069436;GBCE01096844;GBDJ01072717;XM_013507397 XP_013362851 MODEL 9031305 protein-coding LOC102018305 melanoma-associated antigen 8-like NW_004955498 2272824 2273840 + 102018305 AGCD01062779;XM_005406469 XP_005406526 MODEL 8847174 pseudo LOC102010891 ras-related protein Rab-43 pseudogene NW_004955413 12621970 12622932 - 102010891 AGCD01013994;XM_005379601 MODEL 8797248 protein-coding Acbd5 acyl-CoA binding domain containing 5 INVOLVED IN pexophagy (ortholog); ASSOCIATED WITH brain disease (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN peroxisome (ortholog) NW_004955429 2623042 2661182 - 102027662 AGCD01028433;AGCD01028434;AGCD01028435;GBCQ01006507;XM_005386871;XM_005386872;XM_005386873;XM_005386874 XP_005386928;XP_005386929;XP_005386930;XP_005386931 MODEL 8860040 protein-coding Rbpjl recombination signal binding protein for immunoglobulin kappa J region like ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); maturity-onset diabetes of the young type 1 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955445 12017500 12029507 - 102008674 AGCD01039731;GBCE01101674;XM_005392436 XP_005392493 MODEL 8918170 protein-coding Il17re interleukin 17 receptor E ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955561 1397286 1409999 + 102013018 AGCD01073855;GBDF01255893;XM_005413048;XM_005413049;XM_005413050 XP_005413105;XP_005413106;XP_005413107 MODEL 126903047 protein-coding C17orf114 chromosome 17 open reading frame 114 8707197 protein-coding LOC102008559 olfactory receptor 1440-like NW_004955511 3846306 3866765 - 102008559 AGCD01066478;AGCD01066479;XM_013506388 XP_013361842 MODEL 8990003 protein-coding Snx3 sorting nexin 3 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN hemoglobin biosynthetic process (ortholog); host-mediated suppression of symbiont invasion (ortholog); intralumenal vesicle formation (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955411 33339974 33344563 - 102011098 AGCD01012354;GBCE01000037;XM_005377844 XP_005377901 MODEL 39133798 misc_rna 7SK 7SK RNA 8922426 ncrna LOC102004127 uncharacterized LOC102004127 NW_004955444 9443882 9445901 - 102004127 AGCD01038970;XR_262255 MODEL 8934816 protein-coding Fh fumarate hydratase ENCODES a protein that exhibits fumarate hydratase activity (ortholog); histone binding (ortholog); INVOLVED IN arginine metabolic process (ortholog); DNA damage response (ortholog); fumarate metabolic process (ortholog); PARTICIPATES IN altered citric acid cycle pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Ataxia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); breast cancer (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 10535801 10558649 + 102018465 AGCD01005864;GBCB01004752;XM_005374820 XP_005374877 MODEL 8911962 pseudo LOC102010100 putative homeodomain transcription factor 2 pseudogene NW_004955442 14465591 14468091 + 102010100 AGCD01037821 MODEL 39134057 misc_rna 7SK 7SK RNA 8856559 protein-coding Rrm2 ribonucleotide reductase regulatory subunit M2 ENCODES a protein that exhibits ferric iron binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 2'-deoxyribonucleotide biosynthetic process (ortholog); deoxyribonucleotide biosynthetic process (ortholog); deoxyribonucleotide metabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear envelope (ortholog) NW_004955487 5477097 5481422 + 102027988 AGCD01059337;GBDF01120663;XM_005404407 XP_005404464 MODEL 8728227 protein-coding LOC102008939 probable E3 ubiquitin-protein ligase HERC6 NW_004955474 12079119 12140769 - 102008939 AGCD01054648;AGCD01054649;AGCD01054650;GBDK01319254;XM_013502713 XP_013358167 MODEL 8925446 ncrna LOC102007414 uncharacterized LOC102007414 NW_004955410 36159193 36161406 - 102007414 AGCD01011421;GBDF01176606;XR_259905 MODEL 39132036 rrna 5S_rRNA 5S ribosomal RNA 9048878 protein-coding Sfpq splicing factor proline and glutamine rich ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); alternative mRNA splicing, via spliceosome (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955452 13267968 13283823 - 102022877 AGCD01044397;AGCD01044398;GBBH01000997;GBCQ01037138;XM_005395311 XP_005395368 MODEL 39131841 rrna 5S_rRNA 5S ribosomal RNA 8864384 protein-coding C1d C1D nuclear receptor corepressor ENCODES a protein that exhibits DNA binding (ortholog); nuclear receptor binding (ortholog); RNA binding (ortholog); INVOLVED IN maturation of 5.8S rRNA (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955424 16787094 16801600 + 102024132 AGCD01024753;GBDF01045582;XM_013514751 XP_013370205 MODEL 9056957 protein-coding LOC102005923 apolipoprotein L3-like NW_004955413 22422434 22450771 - 102005923 AGCD01014300;AGCD01014301;AGCD01014302;GBBH01182541;XM_005379647 XP_005379704 MODEL 10264762 ncrna LOC106150350 uncharacterized LOC106150350 NW_004955474 6477484 6487122 - 106150350 AGCD01054479;AGCD01054480;GBCQ01029606;XR_001237118;XR_001237119 MODEL 8977474 protein-coding LOC102007042 olfactory receptor 5M9 NW_004955511 1599335 1600267 - 102007042 AGCD01066373;XM_005407967 XP_005408024 MODEL 8772604 protein-coding Agmat agmatinase (putative) ENCODES a protein that exhibits arginase activity (ortholog); guanidinobutyrase activity (ortholog); guanidinopropionase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955527 2563705 2572421 + 102011475 AGCD01069453;GBCB01087179;XM_005409867 XP_005409924 MODEL 9021479 protein-coding Atad2b ATPase family AAA domain containing 2B ENCODES a protein that exhibits histone reader activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955469 6022152 6162222 - 102022070 AGCD01052364;AGCD01052365;GBDJ01386641;XM_005400366;XM_005400367 XP_005400423;XP_005400424 MODEL 8889247 pseudo LOC102022383 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955414 28884771 28926524 + 102022383 AGCD01015691;AGCD01015692;AGCD01015693;AGCD01015694;AGCD01015695;AGCD01015696;AGCD01015697 MODEL 9050958 ncrna LOC102004883 uncharacterized LOC102004883 NW_004955404 21351961 21500830 + 102004883 AGCD01003725;AGCD01003726;AGCD01003727;GBDF01028560;XR_259320 MODEL 8993567 protein-coding Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); cold acclimation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early endosome membrane (ortholog) NW_004955405 39503020 39540069 - 102016558 AGCD01005501;GBCQ01070746;XM_005374608;XM_013518984;XM_013518992;XM_013518995 XP_005374665;XP_013374438;XP_013374446;XP_013374449 MODEL 8796836 pseudo LOC102012095 heterogeneous nuclear ribonucleoprotein M pseudogene NW_004955417 9967960 9969097 + 102012095 AGCD01018063 MODEL 8958005 pseudo LOC102013318 nucleolin-like NW_004955510 6049576 6050426 + 102013318 AGCD01066299 MODEL 8964783 protein-coding Rbpms RNA binding protein, mRNA processing factor ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN mitotic cytokinesis (ortholog); protein-containing complex assembly (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955463 6817570 6973393 + 102008510 AGCD01049706;AGCD01049707;AGCD01049708;AGCD01049709;GBCQ01000539;GBDI01292820;XM_005398470 XP_005398527 MODEL 8914794 protein-coding Acbd6 acyl-CoA binding domain containing 6 ENCODES a protein that exhibits enzyme activator activity (ortholog); fatty-acyl-CoA binding (ortholog); lipid binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955406 19481640 19658807 - 102011275 AGCD01006082;AGCD01006083;AGCD01006084;AGCD01006085;AGCD01006086;AGCD01006087;GBDK01324069;XM_005374985;XM_013521346 XP_005375042;XP_013376800 MODEL 9043453 protein-coding Wdr20 WD repeat domain 20 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Developmental Disabilities (ortholog); hydrocephalus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); peptidase complex (ortholog) NW_004955538 1520336 1590824 + 102026907 AGCD01071069;AGCD01071070;AGCD01071071;AGCD01071072;AGCD01071073;AGCD01071074;GBDF01083282;XM_005410738;XM_005410739;XM_005410740;XM_005410743;XM_005410746;XM_005410747;XM_005410748;XM_013507829;XM_013507830;XM_013507831 XP_005410795;XP_005410796;XP_005410797;XP_005410800;XP_005410803;XP_005410804;XP_005410805;XP_013363283;XP_013363284;XP_013363285 MODEL 8891557 protein-coding LOC102013688 major histocompatibility complex class I-related gene protein ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955406 20098544 20117065 + 102013688 AGCD01006097;GBCB01036344;XM_005374992 XP_005375049 MODEL 9027124 protein-coding LOC102004491 olfactory receptor 2A5 NW_004955491 387723 388640 + 102004491 AGCD01060331;XM_005404723 XP_005404780 MODEL 8847952 protein-coding Prkacb protein kinase cAMP-activated catalytic subunit beta ENCODES a protein that exhibits ATP binding (ortholog); cAMP-dependent protein kinase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN negative regulation of meiotic cell cycle (ortholog); negative regulation of smoothened signaling pathway (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN adenosine signaling pathway; dopamine signaling pathway; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenal cortical adenoma (ortholog); biliary tract benign neoplasm (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog); ciliary base (ortholog) NW_004955423 9630308 9747820 - 102004726 AGCD01023663;AGCD01023664;AGCD01023665;GBCB01073774;XM_005385166 XP_005385223 MODEL 9032392 protein-coding LOC102011733 cytochrome b-c1 complex subunit 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955455 4013197 4015448 + 102011733 AGCD01045662;GBDF01008630;XM_005396224 XP_005396281 MODEL 8835305 protein-coding LOC102009725 sperm motility kinase Z-like NW_004955421 18237422 18307124 + 102009725 AGCD01022039;AGCD01022040;AGCD01022041;AGCD01022042;GBBH01067465;XM_005383799;XM_005383800;XM_013513643;XR_001233830 XP_005383856;XP_005383857;XP_013369097 MODEL 9049862 protein-coding Cers5 ceramide synthase 5 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); oligodendrocyte development (ortholog); sphingolipid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955547 697089 728573 - 102015570 AGCD01072172;AGCD01072173;AGCD01072174;GBCE01052660;XM_005411958 XP_005412015 MODEL 8822301 protein-coding Snx30 sorting nexin family member 30 INVOLVED IN positive regulation of autophagosome assembly (ortholog); protein transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955419 14567317 14645442 - 102028419 AGCD01020029;AGCD01020030;AGCD01020031;AGCD01020032;GBDJ01369598;XM_005382931 XP_005382988 MODEL 39133799 misc_rna 7SK 7SK RNA 8924826 trna Trnaf-aaa transfer RNA phenylalanine (anticodon AAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465 13258353 13258434 + 101978786 AGCD01050595 MODEL 8832805 protein-coding Bms1 BMS1 ribosome biogenesis factor INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); ectodermal dysplasia (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955546 1054208 1089048 + 102004325 AGCD01072039;AGCD01072040;GBDF01089574;XM_005411758;XM_005411759;XM_005411761 XP_005411815;XP_005411816;XP_005411818 MODEL 39134185 misc_rna 7SK 7SK RNA 8918349 protein-coding Cdkal1 CDKAL1 threonylcarbamoyladenosine tRNA methylthiotransferase ENCODES a protein that exhibits tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity (ortholog); INVOLVED IN maintenance of translational fidelity (ortholog); tRNA methylthiolation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Birth Weight (ortholog); Body Weight (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); rough endoplasmic reticulum (ortholog) NW_004955483 5398748 5993071 - 102015012 AGCD01057761;AGCD01057762;AGCD01057763;AGCD01057764;AGCD01057765;AGCD01057766;AGCD01057767;GBBH01221864;XM_005403380;XM_005403381;XM_013503828 XP_005403437;XP_005403438;XP_013359282 MODEL 8876679 protein-coding Ankrd63 ankyrin repeat domain 63 NW_004955416 7212413 7216526 - 102017122 AGCD01016970;GBDF01016126;XM_005381225;XM_005381226;XM_005381227;XM_013512598 XP_005381282;XP_005381283;XP_005381284;XP_013368052 MODEL 8982470 protein-coding LOC102014047 putative RNA-binding protein 15B NW_004955417 11225049 11227515 + 102014047 AGCD01018125;AGCD01018126;GBBH01122453;XM_013512700 XP_013368154 MODEL 8781707 protein-coding Atpaf2 ATP synthase mitochondrial F1 complex assembly factor 2 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Deglutition Disorders (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) NW_004955478 11249073 11264249 + 102023589 AGCD01056165;GBDJ01186302;XM_005402289 XP_005402346 MODEL 8705467 protein-coding Alkbh3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); cytosine C-5 DNA demethylase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA alkylation repair (ortholog); negative regulation of cytoplasmic translation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 3660504 3695352 - 102024809 AGCD01022526;AGCD01022527;GBCB01024527;XM_005384082;XM_005384083 XP_005384139;XP_005384140 MODEL 8812191 pseudo LOC102018311 olfactory receptor 8K3-like NW_004955511 1346191 1347156 + 102018311 AGCD01066365 MODEL 8779241 protein-coding Fhad1 forkhead associated phosphopeptide binding domain 1 INVOLVED IN apoptotic process (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955527 2756630 2879135 - 102014281 AGCD01069466;AGCD01069467;AGCD01069468;AGCD01069469;GBBH01127202;GBDI01262100;XM_013507414 XP_013362868 MODEL 8931510 protein-coding Plekhm3 pleckstrin homology domain containing M3 INVOLVED IN myoblast differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955457 7065443 7239663 + 102008701 AGCD01046868;AGCD01046869;AGCD01046870;AGCD01046871;AGCD01046872;AGCD01046873;AGCD01046874;GBBH01021390;XM_005396971;XM_005396973;XM_005396974 XP_005397028;XP_005397030;XP_005397031 MODEL 8912933 pseudo LOC102022385 tropomyosin alpha-3 chain pseudogene NW_004955415 23751994 23752771 - 102022385 AGCD01016560;XR_260339 MODEL 8799882 protein-coding LOC102010896 protocadherin beta-4-like NW_004955415 12626696 12673195 - 102010896 AGCD01016208;AGCD01016209;AGCD01016210;AGCD01016211;AGCD01016212;AGCD01016213;AGCD01016214;AGCD01016215;AGCD01016216;AGCD01016217;AGCD01016218;GBDJ01233417;XM_013512127 XP_013367581 MODEL 8883750 pseudo LOC102008560 cell division control protein 42 homolog pseudogene NW_004955430 16590042 16591833 - 102008560 AGCD01029642 MODEL 8866341 protein-coding LOC102008192 60S ribosomal protein L37a-like NW_004955458 10729549 10729854 - 102008192 AGCD01047704;XM_005397532 XP_005397589 MODEL 10099434 protein-coding Dmbt1 deleted in malignant brain tumors 1 ENCODES a protein that exhibits DNA binding (ortholog); heparan sulfate binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); blastocyst development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955477 863388 899703 + 106146406 AGCD01055495;AGCD01055496;GBCQ01031749;XM_013503090;XM_013503091;XM_013503092;XM_013503093;XM_013503094 XP_013358544;XP_013358545;XP_013358546;XP_013358547;XP_013358548 MODEL 8851349 protein-coding Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif 20 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN cilium assembly (ortholog); extracellular matrix organization (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cleft lip (ortholog); Familial Prostate Cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955500 2688281 2850667 - 102004184 AGCD01063712;AGCD01063713;AGCD01063714;AGCD01063715;AGCD01063716;AGCD01063717;AGCD01063718;GBCB01027734;GBCB01112256;XM_005406579 XP_005406636 MODEL 8881058 protein-coding LOC102003080 interleukin-1 receptor type 1-like NW_004955756 6773 24480 + 102003080 AGCD01078281;GBCB01092471;GBDK01182668;XM_005415091 XP_005415148 MODEL 39131842 rrna 5S_rRNA 5S ribosomal RNA 9034611 protein-coding Epn3 epsin 3 ENCODES a protein that exhibits EH domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); diastolic heart failure (ortholog); lung cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955451 11209454 11218427 - 102011935 AGCD01043342;GBBH01089702;XM_013519085;XM_013519086;XM_013519088;XM_013519089;XM_013519090 XP_013374539;XP_013374540;XP_013374542;XP_013374543;XP_013374544 MODEL 8991305 protein-coding Sfr1 SWI5 dependent homologous recombination repair protein 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); double-strand break repair via homologous recombination (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955485 6520747 6525359 - 102026429 AGCD01058621;GBDK01153601;XM_005403788;XM_005403789;XM_005403790;XM_005403791;XM_013504071;XM_013504072 XP_005403845;XP_005403846;XP_005403847;XP_005403848;XP_013359525;XP_013359526 MODEL 8733378 protein-coding Cd46 CD46 molecule ENCODES a protein that exhibits cadherin binding (ortholog); endopeptidase activity (ortholog); protein sequestering activity (ortholog); INVOLVED IN negative regulation of complement activation, alternative pathway (ortholog); negative regulation of complement activation, classical pathway (ortholog); positive regulation of interleukin-10 production (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); acute necrotizing pancreatitis (ortholog); FOUND IN acrosomal vesicle (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955406 43002817 43034555 + 102004780 AGCD01006723;GBCB01061702;XM_005375434;XM_005375435;XM_005375436;XM_005375437;XM_005375438;XM_005375439;XM_005375440;XM_005375441;XM_013502946;XR_001230795;XR_259539 XP_005375491;XP_005375492;XP_005375493;XP_005375494;XP_005375495;XP_005375496;XP_005375497;XP_005375498;XP_013358400 MODEL 8963881 protein-coding Cux2 cut like homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cognition (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955482 7783483 8045808 + 102005380 AGCD01057490;AGCD01057491;AGCD01057492;AGCD01057493;AGCD01057494;AGCD01057495;AGCD01057496;AGCD01057497;AGCD01057498;AGCD01057499;GBDF01087934;GBDF01087936;XM_013503646 XP_013359100 MODEL 8746266 protein-coding Slc35d2 solute carrier family 35 member D2 ENCODES a protein that exhibits nucleotide-sugar transmembrane transporter activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955422 23544376 23582585 + 102011129 AGCD01023195;AGCD01023196;AGCD01023197;GBBH01107187;GBCB01051625;XM_013514308 XP_013369762 MODEL 9047385 pseudo LOC102010103 ubiquitin-conjugating enzyme E2 J1 pseudogene NW_004955444 6424523 6426955 - 102010103 AGCD01038865 MODEL 39134058 misc_rna 7SK 7SK RNA 9000805 protein-coding Cbln1 cerebellin 1 precursor ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor regulator activity (ortholog); INVOLVED IN cerebellar granule cell differentiation (ortholog); heterophilic cell-cell adhesion (ortholog); maintenance of synapse structure (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); parallel fiber to Purkinje cell synapse (ortholog) NW_004955433 7516487 7519929 - 102008449 AGCD01031571;GBDF01188759;GBDK01241650;XM_005388499 XP_005388556 MODEL 8928808 protein-coding Cldn2 claudin 2 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN calcium-independent cell-cell adhesion (ortholog); cell-cell adhesion (ortholog); innate immune response in mucosa (ortholog); ASSOCIATED WITH AZOOSPERMIA, OBSTRUCTIVE, WITH NEPHROLITHIASIS (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955490 9137157 9180945 - 102021983 AGCD01060306;GBCQ01011511;XM_005404708;XM_005404709;XM_005404710 XP_005404765;XP_005404766;XP_005404767 MODEL 39134366 misc_rna 7SK 7SK RNA 9012435 ncrna LOC102008944 uncharacterized LOC102008944 NW_004955417 25705054 25707401 - 102008944 AGCD01018493;GBCE01099798;XR_260495 MODEL 8816121 protein-coding Il18 interleukin 18 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-18 receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell population proliferation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); decoy receptor complex (ortholog); extracellular region (ortholog) NW_004955412 13807361 13826007 - 102027829 AGCD01012846;GBCQ01010502;XM_005378111;XM_005378112 XP_005378168;XP_005378169 MODEL 9030604 protein-coding Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B ENCODES a protein that exhibits identical protein binding (ortholog); ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (ortholog); INVOLVED IN 2'-deoxyribonucleotide biosynthetic process (ortholog); deoxyribonucleoside triphosphate metabolic process (ortholog); deoxyribonucleotide biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; gemcitabine pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 5 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955417 26949686 26976976 - 102016594 AGCD01018527;AGCD01018528;GBCC01047005;XM_005381935;XM_005381936;XM_005381937 XP_005381992;XP_005381993;XP_005381994 MODEL 8988857 protein-coding Atpsckmt ATP synthase c subunit lysine N-methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN positive regulation of sensory perception of pain (ortholog); regulation of mitochondrial ATP synthesis coupled proton transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955426 116223 131798 - 102029535 AGCD01025996;GBDF01145448;XM_005386109;XM_005386111;XM_013514990 XP_005386166;XP_005386168;XP_013370444 MODEL 39132037 rrna 5S_rRNA 5S ribosomal RNA 8801136 protein-coding LOC102007418 olfactory receptor 143-like NW_004955412 25270890 25271828 + 102007418 AGCD01013143;XM_005378419 XP_005378476 MODEL 8983663 ncrna LOC102004128 uncharacterized LOC102004128 NW_004955563 205695 206242 - 102004128 AGCD01074053;XR_265014 MODEL 8903922 ncrna LOC102008561 uncharacterized LOC102008561 NW_004955432 20882075 20884968 - 102008561 AGCD01031209;AGCD01031210;XR_261538 MODEL 8899767 protein-coding LOC102004494 testis-specific Y-encoded-like protein 5 NW_004955422 306038 309442 - 102004494 AGCD01022403;AGCD01022404;XM_005384934 XP_005384991 MODEL 8864407 protein-coding C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); intestinal epithelial cell development (ortholog); kidney development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN membrane (ortholog) NW_004955432 14298873 14353824 + 102025281 AGCD01031042;GBBH01190693;XM_005388090 XP_005388147 MODEL 10236602 ncrna LOC106150351 uncharacterized LOC106150351 NW_004955474 6774840 6777950 - 106150351 AGCD01054494;GBCQ01123458;XR_001237120 MODEL 39131844 rrna 5S_rRNA 5S ribosomal RNA 8897788 trna Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978787 AGCD01003541;AGCD01050597;AGCD01050631;AGCD01050636;AGCD01057309;AGCD01062085;AGCD01066489;AGCD01066490 MODEL 8823190 protein-coding LOC102005927 olfactory receptor 52A5-like NW_004955414 21125400 21126350 - 102005927 AGCD01015407;XM_005380494 XP_005380551 MODEL 8907186 protein-coding Snx31 sorting nexin 31 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955417 15779500 15835668 - 102018494 AGCD01018243;GBCE01074372;XM_005381870;XM_013512837;XM_013512838 XP_005381927;XP_013368291;XP_013368292 MODEL 10275255 protein-coding Ankrd65 ankyrin repeat domain 65 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955486 9383502 9384519 + 106146596 AGCD01059179;GBDI01264717;GBDI01264722;XM_013504148 XP_013359602 MODEL 8901854 protein-coding LOC102013325 putative spermatogenesis-associated protein 31D4 NW_004955432 3999312 4004493 + 102013325 AGCD01030686;GBDF01049444;XM_005387970;XM_005387971 XP_005388027;XP_005388028 MODEL 8711176 pseudo LOC102012100 target of rapamycin complex 2 subunit MAPKAP1-like NW_004955421 30163102 30165459 + 102012100 AGCD01022382 MODEL 8980485 protein-coding Aprg1 APRG1 tumor suppressor candidate ASSOCIATED WITH stomach cancer (ortholog) NW_004955421 4296058 4296534 + 102028426 AGCD01021688;XM_005415366 XP_005415423 MODEL 8978840 protein-coding Fhdc1 FH2 domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN cilium assembly (ortholog); Golgi ribbon formation (ortholog); stress fiber assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); FOUND IN cilium (ortholog); cytoplasmic microtubule (ortholog); Golgi apparatus (ortholog) NW_004955471 7368086 7399431 + 102024000 AGCD01053147;AGCD01053148;GBBH01164761;GBDI01261606;XM_013522903 XP_013378357 MODEL 8845698 protein-coding Plekhn1 pleckstrin homology domain containing N1 ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol phosphate binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); positive regulation of apoptotic process (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytoskeleton (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955486 9736801 9744659 - 102011126 AGCD01059198;GBDJ01386505;XM_005404287;XM_005404288 XP_005404344;XP_005404345 MODEL 8941559 protein-coding Rbpms2 RNA binding protein, mRNA processing factor 2 ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of smooth muscle cell differentiation (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955450 10746708 10770540 + 102009670 AGCD01042634;AGCD01042635;GBCB01088798;XM_013518834 XP_013374288 MODEL 8893588 protein-coding LOC102007043 olfactory receptor 5W2-like NW_004955511 691641 692573 - 102007043 AGCD01066337;XM_005408207 XP_005408264 MODEL 9066476 protein-coding Acbd7 acyl-CoA binding domain containing 7 INVOLVED IN energy homeostasis (ortholog); G protein-coupled receptor signaling pathway (ortholog); gene expression (ortholog) NW_004955429 19367352 19372358 + 102004839 AGCD01028949;AGCD01028950;GBDF01002478;XM_005387146;XM_005387147 XP_005387203;XP_005387204 MODEL 9047480 pseudo LOC102013689 signal recognition particle 9 kDa protein pseudogene NW_004955407 1763425 1763685 + 102013689 AGCD01006798 MODEL 8790057 protein-coding Wdr24 WD repeat domain 24 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN GATOR2 complex (ortholog); lysosomal membrane (ortholog) NW_004955442 16513074 16519296 + 102019336 AGCD01037901;GBDJ01084560;XM_005391617;XM_005391618 XP_005391674;XP_005391675 MODEL 8720602 protein-coding Dmbx1 diencephalon/mesencephalon homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult feeding behavior (ortholog); adult locomotory behavior (ortholog); brain development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); strabismus (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955464 11788526 11811885 - 102019153 AGCD01050161;GBDF01264890;XM_005398674 XP_005398731 MODEL 9031211 protein-coding Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); AMP-activated protein kinase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); regulation of catalytic activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; FOUND IN nucleotide-activated protein kinase complex (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955500 7834550 7850412 - 102013849 AGCD01063952;AGCD01063953;AGCD01063954;GBDK01126945;XM_005406688;XM_013505682;XM_013505684;XM_013505685 XP_005406745;XP_013361136;XP_013361138;XP_013361139 MODEL 8881027 protein-coding LOC102010898 creatine kinase U-type, mitochondrial NW_004955416 10117075 10122968 + 102010898 AGCD01017108;AGCD01017109;GBDJ01024945;XM_013512557;XM_013512558 XP_013368011;XP_013368012 MODEL 8919542 protein-coding Cers6 ceramide synthase 6 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); oligodendrocyte development (ortholog); positive regulation of oligodendrocyte apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955449 5636678 5920377 - 102005863 AGCD01041942;AGCD01041943;AGCD01041944;AGCD01041945;AGCD01041946;GBDK01357017;XM_005393276;XM_013518781 XP_005393333;XP_013374235 MODEL 9044936 protein-coding Bmt2 base methyltransferase of 25S rRNA 2 homolog ENCODES a protein that exhibits protein-containing complex binding (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to methionine (ortholog); positive regulation of TORC1 signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955432 19046121 19107178 - 102003997 AGCD01031165;AGCD01031166;AGCD01031167;GBDF01192648;GBDJ01278833;XM_013516035 XP_013371489 MODEL 8852330 ncrna LOC102004884 uncharacterized LOC102004884 NW_004955452 4504172 4505457 - 102004884 AGCD01043984;GBCQ01086582;XR_262651 MODEL 8818731 ncrna LOC102014048 uncharacterized LOC102014048 NW_004955481 9924244 9930207 - 102014048 AGCD01057127;GBDK01357816;XR_263799 MODEL 8711922 protein-coding LOC102010104 olfactory receptor 7G2-like NW_004955563 273849 274787 + 102010104 AGCD01074059;XM_005413199 XP_005413256 MODEL 8995118 protein-coding Slc35d3 solute carrier family 35 member D3 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); UDP-glucose transmembrane transporter activity (ortholog); INVOLVED IN energy homeostasis (ortholog); platelet dense granule organization (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955439 60689 63968 - 102019203 AGCD01035579;XM_005390458 XP_005390515 MODEL 8923657 ncrna LOC102022388 uncharacterized LOC102022388 NW_004955478 11128973 11130658 + 102022388 AGCD01056161;GBDF01005544;XR_263725;XR_263726 MODEL 39132038 rrna 5S_rRNA 5S ribosomal RNA 8747419 protein-coding LOC102003083 zinc finger and SCAN domain-containing protein 4-like NW_004956963 711 1829 + 102003083 AGCD01080359;XM_013510241 XP_013365695 MODEL 8865198 protein-coding Agmo alkylglycerol monooxygenase ENCODES a protein that exhibits glyceryl-ether monooxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); lipid metabolic process (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955410 18713191 18881824 - 102020639 AGCD01011010;AGCD01011011;AGCD01011012;AGCD01011013;AGCD01011014;XM_005415288 XP_005415345 MODEL 9048803 protein-coding Adamts3 ADAM metallopeptidase with thrombospondin type 1 motif 3 ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN collagen biosynthetic process (ortholog); in utero embryonic development (ortholog); positive regulation of vascular endothelial growth factor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ascites (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955447 803287 1036435 + 102019752 AGCD01040487;AGCD01040488;AGCD01040489;AGCD01040490;AGCD01040491;GBCE01120181;XM_005392768 XP_005392825 MODEL 9046264 protein-coding Atad5 ATPase family AAA domain containing 5 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Elg1 RFC-like complex (ortholog); nucleus (ortholog) NW_004955481 6986128 7031113 + 102021970 AGCD01057046;AGCD01057047;GBDF01075712;XM_005402808 XP_005402865 MODEL 8762799 protein-coding LOC102008562 carboxylesterase 1D-like NW_004955433 13405185 13440775 - 102008562 AGCD01031690;GBDJ01424046;XM_005388329;XM_005388330 XP_005388386;XP_005388387 MODEL 8907898 protein-coding Cdkl1 cyclin dependent kinase like 1 INVOLVED IN heart development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955409 12419556 12472215 + 102023234 AGCD01009548;AGCD01009549;GBBH01119648;XM_005376824;XM_005376825 XP_005376881;XP_005376882 MODEL 15036848 trna Trnag-acc transfer RNA glycine (anticodon ACC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978843 8925022 protein-coding Alkbh4 alkB homolog 4, lysine demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); actin binding (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); cleavage furrow ingression (ortholog); positive regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN contractile ring (ortholog); cytoplasm (ortholog); midbody (ortholog) NW_004955456 15158380 15167318 + 102015079 AGCD01046662;GBCQ01014194;XM_005396835 XP_005396892 MODEL 9007949 ncrna LOC102018312 uncharacterized LOC102018312 NW_004955430 19090204 19090891 + 102018312 AGCD01029707;GBDF01190178;XR_261433 MODEL 8937771 protein-coding Cuzd1 CUB and zona pellucida like domains 1 INVOLVED IN hormone-mediated signaling pathway (ortholog); trypsinogen activation (ortholog); FOUND IN membrane (ortholog); zymogen granule (ortholog); zymogen granule membrane (ortholog) NW_004955477 1055245 1067702 - 102023588 AGCD01055502;GBDF01014874;XM_005401950 XP_005402007 MODEL 39134059 misc_rna 7SK 7SK RNA 8735883 protein-coding Cldn20 claudin 20 FOUND IN plasma membrane (ortholog); tight junction (ortholog) NW_004955439 6923157 6924098 - 102020717 AGCD01035762;XM_005390548 XP_005390605 MODEL 39134367 misc_rna 7SK 7SK RNA 8762871 pseudo LOC102012105 39S ribosomal protein L33, mitochondrial pseudogene NW_004955425 1338173 1339060 + 102012105 AGCD01025221;XM_005386083 MODEL 8703787 ncrna LOC102011736 uncharacterized LOC102011736 NW_004955456 6662166 6678865 - 102011736 AGCD01046375;GBDF01041115;XR_001236334 MODEL 8955232 ncrna LOC102009731 uncharacterized LOC102009731 NW_004955495 6647375 6652586 + 102009731 AGCD01062086;GBDK01350689;XR_264167 MODEL 8750965 protein-coding Il18bp interleukin 18 binding protein ENCODES a protein that exhibits interleukin-18 binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to tumor necrosis factor (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); allergic contact dermatitis (ortholog); arteriosclerosis (ortholog); FOUND IN decoy receptor complex (ortholog); extracellular region (ortholog) NW_004955414 19327828 19332577 - 102006332 AGCD01015312;GBDI01016320;XM_005380020;XM_005380021;XM_005380022 XP_005380077;XP_005380078;XP_005380079 MODEL 8827259 protein-coding Atr ATR serine/threonine kinase ENCODES a protein that exhibits histone H2AXS139 kinase activity (ortholog); MutLalpha complex binding (ortholog); MutSalpha complex binding (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to UV (ortholog); chromosome organization (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN ATR-ATRIP complex (ortholog); chromosome (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955508 3337036 3440313 + 102013741 AGCD01065808;AGCD01065809;AGCD01065810;AGCD01065811;GBBH01077775;XM_005407741;XM_013506249 XP_005407798;XP_013361703 MODEL 9067501 protein-coding Epo erythropoietin ENCODES a protein that exhibits cytokine activity (ortholog); erythropoietin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN acute-phase response (ortholog); apoptotic process (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN erythropoietin signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Subdural Hematoma (ortholog); Acute-Phase Reaction (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955573 203875 206078 - 102013562 AGCD01074966;GBDF01164330;XM_005413690 XP_005413747 MODEL 8819642 pseudo LOC102013690 mediator of RNA polymerase II transcription subunit 28 pseudogene NW_004955407 31231791 31232327 - 102013690 AGCD01007643 MODEL 8789681 pseudo LOC102004129 protein kinase C iota type pseudogene NW_004955446 7596366 7600065 + 102004129 AGCD01040126;XM_005392657 MODEL 8897338 protein-coding Wdr25 WD repeat domain 25 ASSOCIATED WITH Breast Cancer, Familial (ortholog); long QT syndrome (ortholog); lung cancer (ortholog) NW_004955438 21445502 21570271 + 102018335 AGCD01035544;AGCD01035545;AGCD01035546;AGCD01035547;GBBH01071352;GBDF01122161;XM_005390456 XP_005390513 MODEL 8737893 protein-coding C1galt1c1 C1GALT1 specific chaperone 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN platelet activation (ortholog); platelet morphogenesis (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH HEMOLYTIC UREMIC SYNDROME, ATYPICAL, 8, WITH RHIZOMELIC SHORT STATURE (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955572 1254289 1258561 + 102030253 AGCD01074947;GBBH01193344;XM_005413651 XP_005413708 MODEL 10085203 ncrna LOC106150352 uncharacterized LOC106150352 NW_004955474 391121 400335 - 106150352 AGCD01054217;XR_001237121;XR_001237122 MODEL 39131845 rrna 5S_rRNA 5S ribosomal RNA 8989543 protein-coding Dmc1 DNA meiotic recombinase 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA strand exchange activity (ortholog); identical protein binding (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); double-strand break repair via homologous recombination (ortholog); female meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); azoospermia (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); condensed nuclear chromosome (ortholog) NW_004955413 24685311 24724269 - 102020645 AGCD01014374;AGCD01014375;AGCD01014376;AGCD01014377;AGCD01014378;GBDF01224109;XM_005379261 XP_005379318 MODEL 8812392 protein-coding Snx33 sorting nexin 33 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955450 2669993 2682503 - 102025744 AGCD01042393;AGCD01042394;GBCQ01127590;XM_005393502 XP_005393559 MODEL 8716765 protein-coding Cd47 CD47 molecule ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); fibrinogen binding (ortholog); protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN ATP export (ortholog); cell migration (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog); glutamatergic synapse (ortholog) NW_004955427 8704519 8740962 - 102012780 AGCD01027076;GBDJ01079526;XM_013515051 XP_013370505 MODEL 8977581 ncrna LOC102008945 uncharacterized LOC102008945 NW_004955418 195005 213629 + 102008945 AGCD01018668;AGCD01018669;GBDF01000281;XR_001233498;XR_001233499 MODEL 8880558 protein-coding LOC102008193 uncharacterized LOC102008193 NW_004955409 10334641 10336946 - 102008193 AGCD01009464;GBDK01043622;XM_005376774;XM_005376775 XP_005376831;XP_005376832 MODEL 9067433 protein-coding Cdkl2 cyclin dependent kinase like 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); craniosynostosis (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955474 1514566 1550120 - 102010152 AGCD01054256;AGCD01054257;AGCD01054258;GBCE01084727;XM_005401320;XM_013502778 XP_005401377;XP_013358232 MODEL 8743554 protein-coding Ankrd66 ankyrin repeat domain 66 NW_004955437 11578962 11589164 + 102008981 AGCD01034578;GBDJ01388364;XM_013517100 XP_013372554 MODEL 8764891 protein-coding Cbln2 cerebellin 2 precursor ENCODES a protein that exhibits signaling receptor regulator activity (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); positive regulation of synapse assembly (ortholog); spontaneous synaptic transmission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); pulmonary hypertension (ortholog); uterine carcinosarcoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955402 56052340 56062190 - 102006847 AGCD01001454;GBDJ01241531;XM_005373058;XM_005373059;XM_005373060;XM_005373061;XM_005373062;XM_013511355 XP_005373115;XP_005373116;XP_005373117;XP_005373118;XP_005373119;XP_013366809 MODEL 9002998 protein-coding LOC102010105 leukocyte immunoglobulin-like receptor subfamily B member 4 NW_004955567 1451186 1471664 - 102010105 AGCD01074476;GBCE01047626;XM_013509228 XP_013364682 MODEL 8960934 pseudo LOC102022391 sorting nexin-2 pseudogene NW_004955418 10862123 10863224 + 102022391 AGCD01018988 MODEL 8782846 protein-coding Plekho1 pleckstrin homology domain containing O1 INVOLVED IN lamellipodium morphogenesis (ortholog); myoblast fusion (ortholog); myoblast migration (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); muscle cell projection membrane (ortholog) NW_004955413 603011 606487 - 102012525 AGCD01013481;GBDF01000598;GBDK01001593;XM_013511531 XP_013366985 MODEL 8941932 protein-coding Fhip1a FHF complex subunit HOOK interacting protein 1A INVOLVED IN protein localization to perinuclear region of cytoplasm (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955471 5985150 6229720 + 102024555 AGCD01053116;AGCD01053117;AGCD01053118;AGCD01053119;AGCD01053120;AGCD01053121;AGCD01053122;GBCB01023762;XM_013522889;XM_013522890;XM_013522891;XM_013522892;XM_013522893 XP_013378343;XP_013378344;XP_013378345;XP_013378346;XP_013378347 MODEL 8780632 protein-coding Aprt adenine phosphoribosyltransferase ENCODES a protein that exhibits adenine binding (ortholog); adenine phosphoribosyltransferase activity (ortholog); AMP binding (ortholog); INVOLVED IN adenine metabolic process (ortholog); AMP salvage (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenine phosphoribosyltransferase deficiency (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955541 2687938 2690906 - 102005635 AGCD01071422;GBBH01000927;XM_005411021 XP_005411078 MODEL 8843670 ncrna LOC102004497 uncharacterized LOC102004497 NW_004955499 552253 553238 - 102004497 AGCD01063239;XR_264215 MODEL 8884980 protein-coding Rrn3 RNA polymerase I transcription factor RRN3 ENCODES a protein that exhibits RNA polymerase binding (ortholog); RNA polymerase I core promoter sequence-specific DNA binding (ortholog); RNA polymerase I general transcription initiation factor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cytoplasm organization (ortholog); DNA-templated transcription initiation (ortholog); PARTICIPATES IN mTOR signaling pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH Parkinson's disease (ortholog); FOUND IN nucleolus (ortholog) NW_004955442 129106 166258 + 102020384 AGCD01037412;AGCD01037413;AGCD01037414;GBCE01046070;XM_005391055;XM_005391058 XP_005391112;XP_005391115 MODEL 9031253 protein-coding Sfrp1 secreted frizzled related protein 1 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); frizzled binding (ortholog); heparin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone trabecula formation (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); diastolic heart failure (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular matrix (ortholog) NW_004955536 1663721 1702678 + 102015981 AGCD01070766;GBCE01029787;XM_005410533 XP_005410590 MODEL 9050315 protein-coding LOC102007420 cytochrome P450 2D16-like NW_004955413 27581708 27585916 - 102007420 AGCD01014517;GBCQ01010821;XM_005379405 XP_005379462 MODEL 8774436 pseudo LOC102005928 60S ribosomal protein L30-like NW_004955475 4519787 4520219 + 102005928 AGCD01054881;XR_263612 MODEL 8952179 pseudo LOC102010899 dnaJ homolog subfamily B member 6-like NW_004955477 2188830 2190566 + 102010899 AGCD01055518;XR_263678 MODEL 10090462 protein-coding A1bg alpha-1-B glycoprotein INVOLVED IN growth hormone receptor signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hepatomegaly (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955584 1025588 1028459 - 106147574 AGCD01075973;AGCD01075974;XM_013509849 XP_013365303 MODEL 8807218 protein-coding Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif 4 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); proteoglycan catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); degenerative disc disease (ortholog); FOUND IN extracellular region (ortholog); nuclear speck (ortholog) NW_004955468 12950333 12958599 - 102004590 AGCD01052193;GBCE01057297;XM_005400258 XP_005400315 MODEL 8762000 ncrna LOC102004885 uncharacterized LOC102004885 NW_004955405 196814 198433 + 102004885 AGCD01004554;GBDF01017517;XR_259350 MODEL 9049718 ncrna LOC102013327 uncharacterized LOC102013327 NW_004955515 1287451 1288282 - 102013327 AGCD01067223;GBDF01052083;XR_264519 MODEL 8860547 trna Trnag-ccc transfer RNA glycine (anticodon CCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955442;NW_004955424 16570981;14887366 16571051;14887436 +;+ 101978846 AGCD01024664;AGCD01037901 MODEL 8978065 protein-coding Dmd dystrophin ENCODES a protein that exhibits actin binding (ortholog); dystroglycan binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process (ortholog); bone development (ortholog); cardiac muscle cell action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); cell junction (ortholog) NW_004955535 1283084 3297015 + 102027455 AGCD01070649;AGCD01070650;AGCD01070651;AGCD01070652;AGCD01070653;AGCD01070654;AGCD01070655;AGCD01070656;AGCD01070657;AGCD01070658;AGCD01070659;AGCD01070660;AGCD01070661;AGCD01070662;AGCD01070663;AGCD01070664;AGCD01070665;AGCD01070666;AGCD01070667;AGCD01070668;AGCD01070669;AGCD01070670;AGCD01070671;AGCD01070672;AGCD01070673;AGCD01070674;AGCD01070675;AGCD01070676;AGCD01070677;AGCD01070678;AGCD01070679;AGCD01070680;AGCD01070681;AGCD01070682;AGCD01070683;AGCD01070684;AGCD01070685;AGCD01070686;AGCD01070687;AGCD01070688;AGCD01070689;AGCD01070690;GBCB01005432;XM_005410485;XM_005410486;XM_005410487;XM_005410488;XM_005410489;XM_013507710 XP_005410542;XP_005410543;XP_005410544;XP_005410545;XP_005410546;XP_013363164 MODEL 8956055 protein-coding Snx4 sorting nexin 4 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); insulin receptor binding (ortholog); leptin receptor binding (ortholog); INVOLVED IN endocytic recycling (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of histamine secretion by mast cell (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic dynein complex (ortholog); early endosome (ortholog) NW_004955427 24520125 24579589 - 102022835 AGCD01027512;AGCD01027513;GBDF01152970;XM_005386551 XP_005386608 MODEL 39134368 misc_rna 7SK 7SK RNA 8844852 pseudo LOC102011738 TBC1 domain family member 31-like NW_004955407 28180371 28202117 - 102011738 AGCD01007576;AGCD01007577 MODEL 8957231 ncrna LOC102009732 uncharacterized LOC102009732 NW_004955424 3418563 3425506 - 102009732 AGCD01024310;GBDF01162625;XR_261036 MODEL 8828676 pseudo LOC102003085 translationally-controlled tumor protein pseudogene NW_004955404 18220065 18220653 + 102003085 AGCD01003611 MODEL 39132039 rrna 5S_rRNA 5S ribosomal RNA 8946942 pseudo LOC102008563 60S ribosomal protein L39-like NW_004955520 1054945 1055417 - 102008563 AGCD01068042 MODEL 8955768 protein-coding Bmx BMX non-receptor tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); ruffle membrane (ortholog) NW_004955519 2638081 2689601 - 102015230 AGCD01067937;GBDI01107256;XM_005409162;XM_005409163;XM_013507003;XM_013507004 XP_005409219;XP_005409220;XP_013362457;XP_013362458 MODEL 9020553 ncrna LOC102004130 uncharacterized LOC102004130 NW_004955447 15374198 15375706 - 102004130 AGCD01041052;GBDF01111391;XR_262435 MODEL 39131846 rrna 5S_rRNA 5S ribosomal RNA 9031978 protein-coding Alkbh5 alkB homolog 5, RNA demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); molecular condensate scaffold activity (ortholog); mRNA N6-methyladenosine dioxygenase activity (ortholog); INVOLVED IN gamma-delta T cell proliferation (ortholog); membraneless organelle assembly (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH lung cancer (ortholog); multiple myeloma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); paraspeckles (ortholog) NW_004955478 11104445 11128980 - 102022698 AGCD01056160;AGCD01056161;GBCE01115231;XM_005402287;XM_013503226 XP_005402344;XP_013358680 MODEL 39134060 misc_rna 7SK 7SK RNA 9061273 protein-coding Slc35d4 solute carrier family 35 member D4 ENCODES a protein that exhibits UDP-N-acetylglucosamine transmembrane transporter activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955402 11514232 11641494 - 102003502 AGCD01000301;AGCD01000302;AGCD01000303;AGCD01000304;GBDJ01391258;XM_005372695;XM_005372698;XM_013503380;XM_013503447;XM_013503471;XM_013503525;XM_013503621;XM_013503657;XM_013503693;XM_013503737;XM_013503805;XR_001230957;XR_001230962;XR_001230968;XR_001231032 XP_005372752;XP_005372755;XP_013358834;XP_013358901;XP_013358925;XP_013358979;XP_013359075;XP_013359111;XP_013359147;XP_013359191;XP_013359259 MODEL 8810433 protein-coding Rbsn rabenosyn, RAB effector ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); Golgi to lysosome transport (ortholog); regulation of Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955429 17444031 17468024 - 102009526 AGCD01028857;GBCB01108995;XM_005387075;XM_005387076;XM_005387077;XM_013515390;XM_013515391;XR_001234494 XP_005387132;XP_005387133;XP_005387134;XP_013370844;XP_013370845 MODEL 8770695 protein-coding Cwc15 CWC15 spliceosome associated protein homolog INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955605 32721 42981 + 102023419 AGCD01076929;GBCQ01062528;XM_005414886 XP_005414943 MODEL 39134186 misc_rna 7SK 7SK RNA 8710498 pseudo LOC102007044 nucleolar GTP-binding protein 2 pseudogene NW_004955430 12703634 12705804 - 102007044 AGCD01029509 MODEL 8945650 protein-coding Accs 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) ENCODES a protein that exhibits 1-aminocyclopropane-1-carboxylate synthase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955422 3442365 3539288 - 102008429 AGCD01022511;AGCD01022512;AGCD01022513;AGCD01022514;AGCD01022515;AGCD01022516;AGCD01022517;AGCD01022518;AGCD01022519;AGCD01022520;AGCD01022521;AGCD01022522;AGCD01022523;GBDF01053397;XM_013513829 XP_013369283 MODEL 9059263 protein-coding Cldn22 claudin 22 NW_004955403 25480063 25481646 + 102010968 AGCD01002289;GBDI01210680;XM_005373506 XP_005373563 MODEL 8702353 ncrna LOC102012107 uncharacterized LOC102012107 NW_004955504 1489501 1499030 + 102012107 AGCD01064841;GBDI01349444;XR_264287 MODEL 9060023 pseudo LOC102008195 40S ribosomal protein S14 pseudogene NW_004955409 22320691 22321337 + 102008195 AGCD01010034 MODEL 8923142 protein-coding Cbln3 cerebellin 3 precursor FOUND IN extracellular region (ortholog); parallel fiber to Purkinje cell synapse (ortholog); synapse (ortholog) NW_004955409 35880337 35882485 + 102025092 AGCD01010435;GBDK01038610;XM_005376997 XP_005377054 MODEL 8761351 protein-coding Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); AMP-activated protein kinase activity (ortholog); INVOLVED IN glycogen metabolic process (ortholog); intracellular signal transduction (ortholog); regulation of catalytic activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cardiac arrest (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog) NW_004955491 5852534 6048820 - 102009726 AGCD01060506;AGCD01060507;AGCD01060508;AGCD01060509;AGCD01060510;AGCD01060511;AGCD01060512;AGCD01060513;GBDF01120908;XM_013504627 XP_013360081 MODEL 8941599 protein-coding Snx5 sorting nexin 5 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); dynactin binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN endosome membrane tubulation (ortholog); epidermal growth factor catabolic process (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN brush border (ortholog); cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955415 26786836 26805762 - 102012316 AGCD01016607;AGCD01016608;GBCB01019926;GBDK01008760;XM_005380914 XP_005380971 MODEL 8924667 protein-coding Il18r1 interleukin 18 receptor 1 ENCODES a protein that exhibits interleukin-18 binding (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN interleukin-18-mediated signaling pathway (ortholog); natural killer cell activation (ortholog); negative regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN interleukin-18 receptor complex (ortholog); membrane (ortholog) NW_004955470 7854995 7887810 + 102020793 AGCD01052814;AGCD01052815;GBBH01123228;XM_005400769;XM_005400770;XM_013522841 XP_005400826;XP_005400827;XP_013378295 MODEL 39134369 misc_rna 7SK 7SK RNA 8899212 ncrna LOC102013691 uncharacterized LOC102013691 NW_004955407 36163435 36172339 + 102013691 AGCD01007759;AGCD01007760;GBDF01020070;XR_259615 MODEL 8700315 protein-coding Sfrp2 secreted frizzled related protein 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme activator activity (ortholog); fibronectin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); apoptotic process (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); inflammatory bowel disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955471 8103937 8112596 - 102006653 AGCD01053178;AGCD01053179;GBBH01060570;GBDJ01000856;XM_005400928 XP_005400985 MODEL 8839589 protein-coding Atat1 alpha tubulin acetyltransferase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); L-lysine N6-acetyltransferase activity, acting on acetyl phosphate as donor (ortholog); tubulin N-acetyltransferase activity (ortholog); INVOLVED IN dentate gyrus development (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955583 643575 652393 + 102004437 AGCD01075844;AGCD01075845;GBCE01098162;GBCQ01099542;XM_013509800 XP_013365254 MODEL 8913957 pseudo LOC102005933 LYR motif-containing protein 2 pseudogene NW_004955418 22822234 22822422 + 102005933 AGCD01019292 MODEL 39132040 rrna 5S_rRNA 5S ribosomal RNA 8942469 protein-coding Cert1 ceramide transporter 1 ENCODES a protein that exhibits ceramide binding (ortholog); ceramide transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell population proliferation (ortholog); ceramide metabolic process (ortholog); ASSOCIATED WITH asphyxia neonatorum (ortholog); autosomal dominant intellectual developmental disorder 34 (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955425 25228216 25355597 + 102024359 AGCD01025911;AGCD01025912;AGCD01025913;AGCD01025914;AGCD01025915;GBCB01056994;GBDF01155103;XM_013514795;XM_013514796 XP_013370249;XP_013370250 MODEL 8803107 protein-coding Cd48 CD48 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN mast cell activation (ortholog); natural killer cell activation (ortholog); signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); membrane raft (ortholog) NW_004955468 12398671 12411241 - 102020104 AGCD01052151;AGCD01052152;GBDI01185855;XM_005400214;XM_005400215;XM_005400216;XM_013522521 XP_005400271;XP_005400272;XP_005400273;XP_013377975 MODEL 8948782 protein-coding Ankrd9 ankyrin repeat domain 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN intracellular copper ion homeostasis (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955538 1735898 1739827 - 102014829 AGCD01071083;AGCD01071084;GBCE01187202;GBDF01001658;XM_013507881 XP_013363335 MODEL 8927721 ncrna LOC102022402 uncharacterized LOC102022402 NW_004955423 16824211 16829887 + 102022402 AGCD01023839;GBDF01074436;XR_001234119;XR_260973 MODEL 9048651 protein-coding Plekho2 pleckstrin homology domain containing O2 INVOLVED IN macrophage apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); carotid stenosis (ortholog); colorectal cancer (ortholog) NW_004955450 10692305 10714031 - 102015262 AGCD01042632;GBCE01154962;XM_005393747 XP_005393804 MODEL 8864402 protein-coding C1galt1c1l C1GALT1 specific chaperone 1 like NW_004955441 10846009 10847263 - 102024854 AGCD01037095;GBDI01279325;XM_005390923 XP_005390980 MODEL 8829225 protein-coding Atraid all-trans retinoic acid induced differentiation factor ENCODES a protein that exhibits xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of osteoblast proliferation (ortholog); negative regulation of protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN lysosomal membrane (ortholog); nuclear envelope (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955469 9194656 9203292 + 102024550 AGCD01052496;GBDF01076159;XM_005400471 XP_005400528 MODEL 8789084 protein-coding Rrp1 ribosomal RNA processing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955407 41456291 41466040 - 102004040 AGCD01007866;AGCD01007867;GBCB01040692;XM_005375882 XP_005375939 MODEL 8761180 protein-coding Wdr26 WD repeat domain 26 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); craniosynostosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955520 950505 983963 + 102006813 AGCD01068039;GBBH01167150;GBDF01044046;XM_005409219;XM_013507050 XP_005409276;XP_013362504 MODEL 8747629 protein-coding Aptx aprataxin ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); DNA 5'-adenosine monophosphate hydrolase activity (ortholog); INVOLVED IN regulation of protein stability (ortholog); single strand break repair (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); coenzyme Q10 deficiency disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955472 2645716 2664394 + 102012530 AGCD01053481;AGCD01053482;GBDF01083780;XM_005401112;XM_005401113;XM_013523036;XM_013523037 XP_005401169;XP_005401170;XP_013378490;XP_013378491 MODEL 8852816 ncrna LOC102014050 uncharacterized LOC102014050 NW_004955420 12687317 12694051 + 102014050 AGCD01020884;GBDF01071654;XR_001233747 MODEL 10386964 ncrna LOC106150353 uncharacterized LOC106150353 NW_004955474 6849183 6898851 - 106150353 AGCD01054497;AGCD01054498;AGCD01054499;AGCD01054500;AGCD01054501;AGCD01054502;AGCD01054503;GBDF01076972;XR_001237123 MODEL 8815960 ncrna LOC102018314 uncharacterized LOC102018314 NW_004955515 3174164 3177414 - 102018314 AGCD01067274;GBCQ01086323;XR_264521 MODEL 8884576 protein-coding A1cf APOBEC1 complementation factor ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA binding (ortholog); INVOLVED IN cytidine to uridine editing (ortholog); embryo implantation (ortholog); mRNA localization resulting in post-transcriptional regulation of gene expression (ortholog); ASSOCIATED WITH breast cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955425 5992538 6077769 - 102003986 AGCD01025363;AGCD01025364;AGCD01025365;GBCQ01093432;XM_005385900;XM_005385901;XM_013514917 XP_005385957;XP_005385958;XP_013370371 MODEL 8828127 ncrna LOC102010901 uncharacterized LOC102010901 NW_004955416 18447091 18476171 + 102010901 AGCD01017406;GBDF01227734;XR_260392 MODEL 39132041 rrna 5S_rRNA 5S ribosomal RNA 8811037 pseudo LOC102004887 alpha-endosulfine pseudogene NW_004955405 31961051 31962768 - 102004887 AGCD01005322 MODEL 8796651 trna Trnag-gcc transfer RNA glycine (anticodon GCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978844 AGCD01042230;AGCD01043711;AGCD01049456;AGCD01051475;AGCD01057629;AGCD01058153;AGCD01058182;AGCD01067339;AGCD01074351 MODEL 8811549 protein-coding Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 ENCODES a protein that exhibits endopeptidase activity (ortholog); extracellular matrix binding (ortholog); heparin binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); defense response to bacterium (ortholog); endocardial cushion morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); degenerative disc disease (ortholog); Hepatomegaly (ortholog); FOUND IN extracellular region (ortholog) NW_004955407 26597165 26643972 - 102021943 AGCD01007531;GBDI01328672;XM_005375602;XM_005375603 XP_005375659;XP_005375660 MODEL 9001999 protein-coding Epor erythropoietin receptor ENCODES a protein that exhibits erythropoietin receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to kainic acid (ortholog); decidualization (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); Brain Hypoxia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955495 2293587 2299302 - 102022714 AGCD01061763;GBCQ01062324;XM_005405664 XP_005405721 MODEL 8823749 protein-coding Bnc1 basonuclin zinc finger protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); rDNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); positive regulation of epithelial cell proliferation (ortholog); positive regulation of oocyte maturation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); cervical cancer (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955416 13428760 13440837 + 102003125 AGCD01017223;GBBH01128516;XM_005381464 XP_005381521 MODEL 8861586 protein-coding Cdkl3 cyclin dependent kinase like 3 INVOLVED IN dendrite extension (ortholog); negative regulation of axon extension (ortholog); positive regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog) NW_004955408 5466943 5552572 - 102015080 AGCD01008138;AGCD01008139;AGCD01008140;AGCD01008141;GBDK01036333;XM_005376149;XM_013508493;XM_013508498;XM_013508502;XM_013508506;XM_013508512;XM_013508516 XP_005376206;XP_013363947;XP_013363952;XP_013363956;XP_013363960;XP_013363966;XP_013363970 MODEL 8972862 protein-coding Slc35e1 solute carrier family 35 member E1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); testicular germ cell cancer (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955524 1204227 1212833 + 102027333 AGCD01068739;GBCE01118450;GBDK01092588;XM_005409500 XP_005409557 MODEL 8838941 protein-coding LOC102010107 protein bunched, class 1/class 3/D/E isoforms-like NW_004955573 470280 471584 + 102010107 AGCD01074980;AGCD01074981;GBDF01228221;XM_005413775 XP_005413832 MODEL 8738750 protein-coding Acd ACD shelterin complex subunit and telomerase recruitment factor ENCODES a protein that exhibits DNA polymerase binding (ortholog); protein-containing complex binding (ortholog); telomerase inhibitor activity (ortholog); INVOLVED IN embryonic limb morphogenesis (ortholog); establishment of protein localization to telomere (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH autosomal dominant dyskeratosis congenita 6 (ortholog); Autosomal Recessive Dyskeratosis Congenita 7 (ortholog); breast carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear body (ortholog); nuclear telomere cap complex (ortholog) NW_004955484 9022520 9025446 + 102026981 AGCD01058403;GBDJ01271407;XM_005403635 XP_005403692 MODEL 8805108 protein-coding Fhip1b FHF complex subunit HOOK interacting protein 1B INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN FHF complex (ortholog) NW_004955414 21954103 21977877 - 102015503 AGCD01015438;GBBH01102313;XM_005380117;XM_005380119;XM_005380121;XM_013512031 XP_005380174;XP_005380176;XP_005380178;XP_013367485 MODEL 8910487 protein-coding LOC102011741 olfactory receptor 12-like NW_004955458 2309459 2310406 + 102011741 AGCD01047223;XM_005397238 XP_005397295 MODEL 8998782 protein-coding LOC102009733 probable N-acetyltransferase CML1 NW_004955424 11899258 11900803 - 102009733 AGCD01024576;GBCQ01149453;XM_013514700 XP_013370154 MODEL 8923676 protein-coding Dmgdh dimethylglycine dehydrogenase ENCODES a protein that exhibits dimethylglycine dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); folic acid binding (ortholog); INVOLVED IN choline catabolic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); dimethylglycine dehydrogenase deficiency (ortholog); FOUND IN mitochondrion (ortholog) NW_004955425 22045977 22103381 + 102025029 AGCD01025813;AGCD01025814;AGCD01025815;GBCQ01038360;XM_013514886 XP_013370340 MODEL 8720386 pseudo LOC102007426 GMP synthase [glutamine-hydrolyzing] pseudogene NW_004955476 3481522 3489789 + 102007426 AGCD01055252 MODEL 8893433 protein-coding LOC102003087 eukaryotic translation initiation factor 1A, X-chromosomal-like NW_004955405 22619382 22620342 + 102003087 AGCD01005097;GBDF01111439;XM_005374400 XP_005374457 MODEL 8917337 protein-coding Cd5 CD5 molecule INVOLVED IN apoptotic signaling pathway (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); T cell costimulation (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955511 5656333 5670510 + 102003896 AGCD01066573;AGCD01066574;GBDI01069952;XM_005408118;XM_005408119 XP_005408175;XP_005408176 MODEL 8706978 protein-coding Sfrp4 secreted frizzled related protein 4 ENCODES a protein that exhibits Wnt-protein binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); decidualization (ortholog); female pregnancy (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); Experimental Arthritis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955460 5654187 5666475 + 102026611 AGCD01048456;GBDJ01005445;XM_005397748 XP_005397805 MODEL 9052661 pseudo LOC102008949 tubulin alpha-1A chain-like NW_004955420 26771001 26771926 - 102008949 AGCD01021431 MODEL 39131847 rrna 5S_rRNA 5S ribosomal RNA 9026066 protein-coding LOC102004135 beta-defensin 105-like NW_004955403 53573434 53576556 - 102004135 AGCD01003064;GBCE01155754;XM_005373832 XP_005373889 MODEL 9040827 protein-coding LOC102004498 cytochrome P450 26A1 NW_004955425 371850 388364 - 102004498 AGCD01025182;GBDF01144580;XM_005385819;XM_005385820;XM_005385821;XM_013514753 XP_005385876;XP_005385877;XP_005385878;XP_013370207 MODEL 39134187 misc_rna 7SK 7SK RNA 8789901 protein-coding Alkbh6 alkB homolog 6, nucleotide demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955468 2575469 2580632 + 102012522 AGCD01051827;GBDF01126813;XM_005399930;XM_005399933;XM_013522541 XP_005399987;XP_005399990;XP_013377995 MODEL 8816859 protein-coding Cwc22 CWC22 spliceosome associated protein homolog ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955403 17070588 17125918 + 102021297 AGCD01002070;GBCE01007893;XM_005373357;XM_013512563 XP_005373414;XP_013368017 MODEL 8984424 pseudo LOC102007046 protein SET-like NW_004955515 1700873 1701654 - 102007046 AGCD01067233 MODEL 9064683 protein-coding Cldn23 claudin 23 INVOLVED IN intracellular protein localization (ortholog); tight junction organization (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog) NW_004955463 4740476 4742283 + 102016991 AGCD01049615;GBCE01025230;XM_005398354 XP_005398411 MODEL 9000908 protein-coding Cbln4 cerebellin 4 precursor INVOLVED IN inhibitory synapse assembly (ortholog); protein secretion (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955445 3209006 3216679 + 102012589 AGCD01039384;XM_005392279 XP_005392336 MODEL 9065684 protein-coding LOC102013693 keratin-associated protein 13-1-like NW_004955407 29696226 29696949 - 102013693 AGCD01007613;AGCD01007614;XM_005375968 XP_005376025 MODEL 8722402 protein-coding Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); protein kinase binding (ortholog); protein kinase regulator activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of glycogen biosynthetic process (ortholog); regulation of glycolytic process (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH carbohydrate metabolic disorder (ortholog); lipid metabolism disorder (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog) NW_004955453 14584405 14594112 + 102003940 AGCD01044871;GBDF01176866;XM_005395623;XM_005395624;XM_005395625;XM_005395626;XM_013519792;XM_013519793;XM_013519794;XM_013519795 XP_005395680;XP_005395681;XP_005395682;XP_005395683;XP_013375246;XP_013375247;XP_013375248;XP_013375249 MODEL 9043370 protein-coding Il18rap interleukin 18 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); Bronchial Hyperreactivity (ortholog); hepatocellular carcinoma (ortholog); FOUND IN interleukin-18 receptor complex (ortholog); plasma membrane (ortholog) NW_004955470 7894900 7923653 + 102021331 AGCD01052816;GBDI01059444;XM_005400771;XM_005400772;XM_013522677 XP_005400828;XP_005400829;XP_013378131 MODEL 8976831 ncrna LOC102008564 uncharacterized LOC102008564 NW_004955523 46481 51442 + 102008564 AGCD01068431;GBBH01049104;XR_001231942;XR_264632 MODEL 8904550 protein-coding Atcay ATCAY kinesin light chain interacting caytaxin ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN mitochondrion distribution (ortholog); negative regulation of L-glutamine biosynthetic process (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); Cayman type cerebellar ataxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955495 5715943 5741202 + 102009730 AGCD01062022;AGCD01062023;AGCD01062024;GBBH01066796;XM_013505239;XM_013505240 XP_013360693;XP_013360694 MODEL 8908628 protein-coding Aqp1 aquaporin 1 (Colton blood group) ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); camera-type eye morphogenesis (ortholog); carbon dioxide transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Aquaporin 1 Deficiency (ortholog); FOUND IN ankyrin-1 complex (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955410 32066196 32078661 + 102023237 AGCD01011335;GBCQ01010363;XM_005377508 XP_005377565 MODEL 8865523 protein-coding LOC102005934 olfactory receptor 1L3-like NW_004955419 5269472 5270444 - 102005934 AGCD01019797;XM_013513102 XP_013368556 MODEL 8942378 protein-coding Wdr27 WD repeat domain 27 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955411 3928775 4123191 + 102021105 AGCD01011562;AGCD01011563;AGCD01011564;AGCD01011565;AGCD01011566;AGCD01011567;AGCD01011568;AGCD01011569;AGCD01011570;AGCD01011571;GBDK01107452;XM_013510744;XM_013510746;XM_013510747;XM_013510748;XM_013510749;XM_013510750 XP_013366198;XP_013366200;XP_013366201;XP_013366202;XP_013366203;XP_013366204 MODEL 39134061 misc_rna 7SK 7SK RNA 10271148 protein-coding LOC106150354 uncharacterized LOC106150354 NW_004955474 1588034 1590913 - 106150354 AGCD01054259;GBCB01018529;XM_013523093 XP_013378547 MODEL 8800445 protein-coding A3galt2 alpha 1,3-galactosyltransferase 2 ENCODES a protein that exhibits alpha-1,3-galactosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetyllactosaminide 3-alpha-galactosyltransferase activity (ortholog); INVOLVED IN cellular response to manganese ion (ortholog); glycosphingolipid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); vesicle (ortholog) NW_004955452 11476485 11489243 - 102007501 AGCD01044337;GBDJ01003070;XM_005395110;XM_013519536;XM_013519537 XP_005395167;XP_013374990;XP_013374991 MODEL 39132042 rrna 5S_rRNA 5S ribosomal RNA 8898873 trna Trnag-ucc transfer RNA glycine (anticodon UCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955462;NW_004955467;NW_004955495 59658;14719232;8709239;4280962 59729;14719303;8709310;4281033 -;-;-;- 101978845 AGCD01049456;AGCD01051466;AGCD01061910;AGCD01074502 MODEL 8930574 protein-coding LOC102012115 retinal dehydrogenase 1-like NW_004955512 5973700 6028923 - 102012115 AGCD01066790;AGCD01066791;AGCD01066792;AGCD01066793;AGCD01066794;AGCD01066795;AGCD01066796;AGCD01066797;AGCD01066798;AGCD01066799;AGCD01066800;AGCD01066801;GBCQ01010585;GBDK01002218;XM_013506549 XP_013362003 MODEL 8814120 pseudo LOC102004499 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955500 2984102 2984589 + 102004499 AGCD01063724 MODEL 8747958 protein-coding LOC102022405 spindle and kinetochore-associated protein 2 NW_004955496 100810 101511 - 102022405 AGCD01062221;XM_013505375 XP_013360829 MODEL 153211029 protein-coding PLEKHO2 pleckstrin homology domain containing O2 8782842 ncrna LOC102011744 uncharacterized LOC102011744 NW_004955459 4423019 4424874 - 102011744 AGCD01048026;GBDF01144191;XR_263015 MODEL 8753374 protein-coding Snx6 sorting nexin 6 ENCODES a protein that exhibits dynactin binding (ortholog); protein homodimerization activity (ortholog); type I transforming growth factor beta receptor binding (ortholog); INVOLVED IN cellular response to amyloid-beta (ortholog); cellular response to epidermal growth factor stimulus (ortholog); intracellular protein transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955409 26323940 26353675 + 102006748 AGCD01010173;AGCD01010174;AGCD01010175;AGCD01010176;GBCQ01034883;GBDK01020668;XM_005376940 XP_005376997 MODEL 8973203 protein-coding Ace2 angiotensin converting enzyme 2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); angiotensin maturation (ortholog); angiotensin-mediated drinking behavior (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) NW_004955519 2591229 2643705 + 102015756 AGCD01067937;GBCC01002081;GQ262783;NM_001282361;XM_013506974;XM_013506975 ACT66267;NP_001269290;XP_013362428;XP_013362429 PROVISIONAL 8725545 pseudo LOC102013333 prefoldin subunit 4-like NW_004955530 2262235 2268611 + 102013333 AGCD01069911 MODEL 8787266 protein-coding Rrp12 ribosomal RNA processing 12 homolog PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); plasma membrane (ortholog) NW_004955507 3520971 3554373 - 102023938 AGCD01065629;AGCD01065630;GBDF01125834;XM_005407598 XP_005407655 MODEL 8985901 protein-coding Atrip ATR interacting protein ASSOCIATED WITH Aicardi-Goutieres Syndrome 1 (ortholog); systemic lupus erythematosus (ortholog) NW_004955532 516772 533774 + 102026254 AGCD01070129;AGCD01070130;GBDF01044899;XM_005410152;XM_013507609 XP_005410209;XP_013363063 MODEL 9057974 ncrna LOC102014053 uncharacterized LOC102014053 NW_004955420 22475431 22480000 - 102014053 AGCD01021201;GBDJ01342875;XR_001233774;XR_001233775;XR_001233776;XR_260737 MODEL 8872280 pseudo LOC102018315 L-lactate dehydrogenase A chain pseudogene NW_004955432 2293262 2295667 - 102018315 AGCD01030614 MODEL 8792465 protein-coding Rbx1 ring-box 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); molecular adaptor activity (ortholog); NEDD8 ligase activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to oxidative stress (ortholog); cellular response to UV (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; neddylation pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955413 26579759 26592980 + 102015096 AGCD01014453;AGCD01014454;GBDF01008494;XM_005379338 XP_005379395 MODEL 8710071 protein-coding Ces3 carboxylesterase 3 ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog) NW_004955484 9602861 9620025 - 102018731 AGCD01058422;AGCD01058423;AGCD01058424;GBCQ01152279;XM_005403709 XP_005403766 MODEL 8811891 pseudo LOC102005936 tyrosine-protein phosphatase non-receptor type 2-like NW_004955483 1097670 1098910 - 102005936 AGCD01057640 MODEL 39131303 protein-coding C1orf56 chromosome 1 open reading frame 56 8702276 pseudo LOC102008196 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 pseudogene NW_004955410 6003925 6016151 - 102008196 AGCD01010695 MODEL 39134188 misc_rna 7SK 7SK RNA 8964277 protein-coding Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); neuron remodeling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN neuron projection (ortholog) NW_004955437 2916598 3070771 + 102020375 AGCD01034292;AGCD01034293;AGCD01034294;AGCD01034295;AGCD01034296;GBDF01127878;XM_005389537;XM_005389538;XM_013516790;XM_013516791;XM_013516792;XM_013516793;XM_013516794;XM_013516795;XM_013516797;XM_013516798;XM_013516799 XP_005389594;XP_005389595;XP_013372244;XP_013372245;XP_013372246;XP_013372247;XP_013372248;XP_013372249;XP_013372251;XP_013372252;XP_013372253 MODEL 8860117 protein-coding Slc35e3 solute carrier family 35 member E3 ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955458 15216365 15231584 + 102011090 AGCD01047877;AGCD01047878;AGCD01047879;AGCD01047880;GBDF01225604;GBDK01319316;XM_013520900 XP_013376354 MODEL 8820553 protein-coding Fhip2a FHF complex subunit HOOK interacting protein 2A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955431 19751575 19780905 + 102018757 AGCD01030455;GBBH01186995;GBCE01153442;XM_013515880 XP_013371334 MODEL 8825687 protein-coding Cldn24 claudin 24 FOUND IN apical plasma membrane (ortholog) NW_004955403 25478478 25479173 + 102010657 AGCD01002289;XM_005373505 XP_005373562 MODEL 9025653 pseudo LOC102007430 protein archease pseudogene NW_004955481 2490488 2495172 - 102007430 AGCD01056876 MODEL 8721033 ncrna LOC102009735 uncharacterized LOC102009735 NW_004955500 4775193 4791358 - 102009735 AGCD01063811;GBDF01219713;XR_001231484;XR_001231485;XR_001231486 MODEL 8886609 protein-coding Dmkn dermokine INVOLVED IN cornified envelope assembly (ortholog); establishment of skin barrier (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955468 4724652 4738556 - 102019377 AGCD01051919;GBDI01255898;XM_005400058;XM_013522526;XM_013522527;XM_013522528;XM_013522529;XM_013522530 XP_005400115;XP_013377980;XP_013377981;XP_013377982;XP_013377983;XP_013377984 MODEL 8920655 protein-coding Cd53 CD53 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); positive regulation of myoblast fusion (ortholog); receptor clustering (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); FOUND IN anchoring junction (ortholog); cell surface (ortholog); cell-cell junction (ortholog) NW_004955435 14388925 14410543 + 102021169 AGCD01033230;AGCD01033231;GBBH01062410;XM_005388932 XP_005388989 MODEL 8910354 ncrna LOC102008951 uncharacterized LOC102008951 NW_004955420 29155972 29159064 - 102008951 AGCD01021493;GBCB01016080;XR_260771 MODEL 39131848 rrna 5S_rRNA 5S ribosomal RNA 8808194 protein-coding Ate1 arginyltransferase 1 ENCODES a protein that exhibits arginyl-tRNA--protein transferase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); response to oxidative stress (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955477 126626 281898 - 102013604 AGCD01055479;AGCD01055480;AGCD01055481;AGCD01055482;AGCD01055483;AGCD01055484;AGCD01055485;GBBH01101397;XM_005401911;XM_005401912;XM_005401913;XM_005401914;XM_005401915;XM_005401916 XP_005401968;XP_005401969;XP_005401970;XP_005401971;XP_005401972;XP_005401973 MODEL 8716536 ncrna LOC102004137 uncharacterized LOC102004137 NW_004955404 19087590 19138303 + 102004137 AGCD01003636;AGCD01003637;AGCD01003638;AGCD01003639;GBCE01122216;XR_259319 MODEL 8730836 protein-coding Wdr3 WD repeat domain 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) NW_004955435 21038053 21069213 + 102012798 AGCD01033468;GBCE01085305;XM_005389069;XM_005389070 XP_005389126;XP_005389127 MODEL 8978359 protein-coding LOC102010109 olfactory receptor 1D2-like NW_004955580 1150676 1151682 - 102010109 AGCD01075649;XM_005414224 XP_005414281 MODEL 8748366 protein-coding Cwc25 CWC25 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955451 13867570 13884433 - 102019657 AGCD01043509;AGCD01043510;AGCD01043511;AGCD01043512;GBDJ01004357;XM_005394284 XP_005394341 MODEL 39134370 misc_rna 7SK 7SK RNA 8917504 protein-coding Cdkl4 cyclin dependent kinase like 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955441 6802669 6842378 - 102015053 AGCD01036943;AGCD01036944;AGCD01036945;GBCQ01099131;XM_005390903;XM_013517583;XM_013517584;XM_013517585;XM_013517586 XP_005390960;XP_013373037;XP_013373038;XP_013373039;XP_013373040 MODEL 9019832 pseudo LOC102008200 septin-2 pseudogene NW_004955463 231431 232195 - 102008200 AGCD01049478 MODEL 8959937 ncrna LOC102012121 uncharacterized LOC102012121 NW_004955435 13285870 13323570 + 102012121 AGCD01033200;GBDF01292749;XR_001234893;XR_001234894;XR_261685 MODEL 9032804 ncrna LOC102003089 uncharacterized LOC102003089 NW_004955406 36472700 36585512 - 102003089 AGCD01006556;AGCD01006557;AGCD01006558;AGCD01006559;GBDF01249792;XR_001236830;XR_001236832;XR_001236833 MODEL 8861327 protein-coding LOC102004889 sterol 26-hydroxylase, mitochondrial ENCODES a protein that exhibits cholestanetetraol 26-dehydrogenase activity (ortholog); cholesterol 26-hydroxylase activity (ortholog); heme binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); cholesterol catabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955453 14601495 14647383 - 102004889 AGCD01044871;GBCE01032755;XM_005395627 XP_005395684 MODEL 8791731 protein-coding Cbr1 carbonyl reductase 1 ENCODES a protein that exhibits 15-hydroxyprostaglandin dehydrogenase (NADP+) activity (ortholog); alcohol dehydrogenase (NADP+) activity (ortholog); carbonyl reductase (NADPH) activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); glucocorticoid metabolic process (ortholog); positive regulation of reactive oxygen species metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cardiomyopathy (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955407 35351601 35354510 - 102008183 AGCD01007739;GBCB01024477;XM_005375726 XP_005375783 MODEL 8751770 protein-coding LOC102013694 olfactory receptor 6C6-like NW_004955458 2486054 2487013 + 102013694 AGCD01047234;XM_005397242 XP_005397299 MODEL 8958879 protein-coding Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cardiac muscle cell proliferation (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acrodysostosis (ortholog); Acrodysostosis 1, with or without Hormone Resistance (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog) NW_004955478 4241283 4262119 - 102026746 AGCD01055845;GBDI01009060;GBDJ01090068;XM_005402117 XP_005402174 MODEL 8902361 ncrna LOC102013334 uncharacterized LOC102013334 NW_004955437 4653031 4657091 + 102013334 AGCD01034368;GBDF01122062;XR_261851 MODEL 8792317 protein-coding Sfrp5 secreted frizzled related protein 5 INVOLVED IN convergent extension involved in axis elongation (ortholog); digestive tract morphogenesis (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cholangiocarcinoma (ortholog); Colorectal Neoplasms (ortholog) NW_004955507 3836607 3841910 - 102007576 AGCD01065638;GBDI01216661;XM_005407640 XP_005407697 MODEL 8779405 protein-coding Snx7 sorting nexin 7 INVOLVED IN positive regulation of autophagosome assembly (ortholog); protein transport (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955435 3481304 3543801 + 102020604 AGCD01032788;AGCD01032789;AGCD01032790;AGCD01032791;GBCB01111236;GBCE01074188;XM_013516541 XP_013371995 MODEL 8834957 protein-coding Bnc2 basonuclin zinc finger protein 2 ENCODES a protein that exhibits DNA binding (ortholog); rDNA binding (ortholog); INVOLVED IN endochondral bone growth (ortholog); mesenchyme development (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nuclear body (ortholog) NW_004955434 19156746 19568983 - 102021793 AGCD01032583;AGCD01032584;AGCD01032585;AGCD01032586;AGCD01032587;AGCD01032588;AGCD01032589;GBDJ01273240;XM_005388715;XM_005388716;XM_005388717;XM_005388718;XM_005388719;XM_013516364;XM_013516365 XP_005388772;XP_005388773;XP_005388774;XP_005388775;XP_005388776;XP_013371818;XP_013371819 MODEL 8927373 protein-coding Aqp10 aquaporin 10 ENCODES a protein that exhibits glycerol channel activity (ortholog); water channel activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); protein homotetramerization (ortholog); response to toxic substance (ortholog); PARTICIPATES IN water transport pathway; FOUND IN apical plasma membrane (ortholog); lipid droplet (ortholog); plasma membrane (ortholog) NW_004955545 845749 848738 + 102011591 AGCD01071820;XM_005411519 XP_005411576 MODEL 9034077 protein-coding Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif 6 INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); lymphoma (ortholog) NW_004955446 3620795 3902829 + 102021401 AGCD01040022;AGCD01040023;AGCD01040024;AGCD01040025;AGCD01040026;AGCD01040027;AGCD01040028;AGCD01040029;AGCD01040030;GBDF01114388;XM_005392632;XM_013518467 XP_005392689;XP_013373921 MODEL 9015091 protein-coding Rrp15 ribosomal RNA processing 15 homolog ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog) NW_004955406 260447 295842 - 102006738 AGCD01005614;GBCB01024197;XM_005374704 XP_005374761 MODEL 8870917 protein-coding Atrn attractin ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cerebellum development (ortholog); myelination (ortholog); pigmentation (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955415 14341635 14505955 + 102027174 AGCD01016297;AGCD01016298;AGCD01016299;GBCB01099530;XM_005380794;XM_005380795 XP_005380851;XP_005380852 MODEL 8780925 protein-coding Ces4a carboxylesterase 4A ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955484 9583684 9601285 - 102018190 AGCD01058422;GBDK01149180;XM_005403707 XP_005403764 MODEL 10334436 protein-coding LOC106150355 uncharacterized LOC106150355 NW_004955474 1872990 1884124 + 106150355 AGCD01054268;AGCD01054269;XM_013523096 XP_013378550 MODEL 8722519 protein-coding Rc3h1 ring finger and CCCH-type domains 1 ENCODES a protein that exhibits CCR4-NOT complex binding (ortholog); double-stranded RNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); B cell homeostasis (ortholog); lymph node development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955406 14053122 14123023 - 102010666 AGCD01005956;AGCD01005957;GBCB01000291;XM_005374881;XM_005374883 XP_005374938;XP_005374940 MODEL 8836456 protein-coding Ago1 argonaute RISC component 1 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); double-stranded RNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN miRNA metabolic process (ortholog); miRNA processing (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); astigmatism (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955452 13935028 13967281 + 102023867 AGCD01044443;AGCD01044444;GBCE01137382;XM_005395161;XM_013519525 XP_005395218;XP_013374979 MODEL 39132043 rrna 5S_rRNA 5S ribosomal RNA 8951529 protein-coding Alkbh7 alkB homolog 7, RNA demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); oxidative RNA demethylase activity (ortholog); tRNA demethylase activity (ortholog); INVOLVED IN DNA damage response (ortholog); fatty acid metabolic process (ortholog); oxidative RNA demethylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955495 3220994 3222675 - 102015024 AGCD01061838;GBCQ01005961;XM_005405724 XP_005405781 MODEL 8942158 pseudo LOC102005937 olfactory receptor 2S2-like NW_004955419 21770973 21771933 + 102005937 AGCD01020283 MODEL 8824582 pseudo LOC102007047 hippocampus abundant transcript-like protein 1 pseudogene NW_004955516 606224 607991 + 102007047 AGCD01067389 MODEL 8946843 pseudo LOC102004504 14-3-3 protein theta pseudogene NW_004955429 23815798 23816541 + 102004504 AGCD01029080;XM_005387222 MODEL 9057820 ncrna LOC102007431 uncharacterized LOC102007431 NW_004955482 3993841 3998952 + 102007431 AGCD01057278;GBDI01245685;XR_001231001 MODEL 9042421 ncrna LOC102009736 uncharacterized LOC102009736 NW_004955425 27635177 27653923 + 102009736 AGCD01025978;GBDJ01039065;XR_001234273;XR_261177 MODEL 8739150 protein-coding Il19 interleukin 19 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN interleukin-19-mediated signaling pathway (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); negative regulation of low-density lipoprotein particle clearance (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH asthma (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955406 42376102 42384902 + 102022669 AGCD01006704;AGCD01006705;XM_013502759;XM_013502762 XP_013358213;XP_013358216 MODEL 9027258 pseudo LOC102010903 60S ribosomal protein L18a pseudogene NW_004955481 3813679 3814552 + 102010903 AGCD01056916 MODEL 8752508 protein-coding Eppk1 epiplakin 1 ENCODES a protein that exhibits intermediate filament binding (ortholog); keratin filament binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); intermediate filament bundle assembly (ortholog); intermediate filament organization (ortholog); ASSOCIATED WITH Chloracne (ortholog); myoepithelioma (ortholog); FOUND IN anchoring junction (ortholog); apicolateral plasma membrane (ortholog); basal part of cell (ortholog) NW_004955454 2512151 2526080 - 102015600 AGCD01045022;GBCE01166943;XM_005395819 XP_005395876 MODEL 8711253 pseudo LOC102014055 40S ribosomal protein S29 pseudogene NW_004955421 41674 43155 + 102014055 AGCD01021542 MODEL 9026854 protein-coding LOC102011750 interstitial collagenase NW_004955412 5994105 6001239 - 102011750 AGCD01012662;XM_005378615 XP_005378672 MODEL 39134062 misc_rna 7SK 7SK RNA 39131849 rrna 5S_rRNA 5S ribosomal RNA 15036843 trna Trnah-aug transfer RNA histidine(anticodon AUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978820 9027417 protein-coding Atf1 activating transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); positive regulation of DNA replication (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN ATF1-ATF4 transcription factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955547 1263288 1299525 + 102017709 AGCD01072207;AGCD01072208;GBDF01044548;GBDF01044556;XM_013508455;XM_013508456 XP_013363909;XP_013363910 MODEL 39134189 misc_rna 7SK 7SK RNA 9051545 protein-coding LOC102022408 zinc finger protein 709-like NW_004955499 281448 281870 + 102022408 AGCD01063210;XM_013505552 XP_013361006 MODEL 8980830 protein-coding Plekhs1 pleckstrin homology domain containing S1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955431 18745990 18798517 + 102008969 AGCD01030434;AGCD01030435;GBDI01020069;XM_005387803;XM_013515824;XM_013515825;XM_013515826;XM_013515828;XM_013515829;XM_013515830;XM_013515831;XR_001234618;XR_001234619;XR_001234620;XR_001234621 XP_005387860;XP_013371278;XP_013371279;XP_013371280;XP_013371282;XP_013371283;XP_013371284;XP_013371285 MODEL 8889560 protein-coding Rc3h2 ring finger and CCCH-type domains 2 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); limb development (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955419 5054288 5103926 + 102003767 AGCD01019781;AGCD01019782;GBDF01192823;XM_005382518;XM_005382519 XP_005382575;XP_005382576 MODEL 8796283 protein-coding Fhip2b FHF complex subunit HOOK interacting protein 2B INVOLVED IN gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955403 45587970 45597700 + 102015591 AGCD01002824;GBCQ01092807;GBDF01049517;XM_013513731;XM_013513735 XP_013369185;XP_013369189 MODEL 8893712 protein-coding Cdkl5 cyclin dependent kinase like 5 ENCODES a protein that exhibits ATP binding (ortholog); kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN mitotic spindle organization (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Angelman syndrome (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) NW_004955586 791886 997713 - 102008365 AGCD01076045;AGCD01076046;AGCD01076047;AGCD01076048;AGCD01076049;GBCE01021075;XM_005414442;XM_005414443;XM_013509894;XM_013509896;XM_013509897;XM_013509898 XP_005414499;XP_005414500;XP_013365348;XP_013365350;XP_013365351;XP_013365352 MODEL 8876581 protein-coding Cldn25 claudin 25 FOUND IN apical plasma membrane (ortholog); tight junction (ortholog) NW_004955659 58925 59882 - 102015365 AGCD01077876;GBBH01126086;XM_005415246 XP_005415303 MODEL 8905192 pseudo LOC102018316 60S ribosomal protein L9 pseudogene NW_004955518 3771000 3771572 - 102018316 AGCD01067809 MODEL 8718208 protein-coding Cd55 CD55 molecule (Cromer blood group) ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); lipid binding (ortholog); virus receptor activity (ortholog); INVOLVED IN maternal process involved in parturition (ortholog); negative regulation of complement activation (ortholog); positive regulation of CD4-positive, alpha-beta T cell activation (ortholog); PARTICIPATES IN complement system pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); breast cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955406 42773368 42796205 + 102030273 AGCD01006718;AGCD01006719;GBCE01002757;GBCQ01070157;XM_013502893;XM_013502896;XM_013502897;XM_013502899;XM_013502901;XM_013502903 XP_013358347;XP_013358350;XP_013358351;XP_013358353;XP_013358355;XP_013358357 MODEL 8877982 ncrna LOC102013339 uncharacterized LOC102013339 NW_004955437 18137771 18139577 + 102013339 AGCD01034777;XR_261891 MODEL 8787493 protein-coding Bnip1 BCL2 interacting protein 1 ENCODES a protein that exhibits calcium-induced calcium release activity (ortholog); SNAP receptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic process in response to mitochondrial fragmentation (ortholog); endoplasmic reticulum membrane fusion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Down syndrome (ortholog); FOUND IN COPI-coated vesicle (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955408 25774305 25788802 + 102029267 AGCD01008652;GBDF01126859;XM_005376349 XP_005376406 MODEL 9055897 protein-coding Snx8 sorting nexin 8 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN early endosome membrane (ortholog); retromer complex (ortholog) NW_004955460 9689654 9743891 - 102023782 AGCD01048548;AGCD01048549;GBCE01097252;XM_005397825;XM_013521218 XP_005397882;XP_013376672 MODEL 8841891 protein-coding Rrp1b ribosomal RNA processing 1B ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to virus (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); granular component (ortholog) NW_004955407 38553866 38577547 - 102029706 AGCD01007808;AGCD01007809;GBCB01098102;XM_005375782 XP_005375839 MODEL 8978760 protein-coding Atrnl1 attractin like 1 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955431 19994365 20745018 + 102019096 AGCD01030460;AGCD01030461;AGCD01030462;AGCD01030463;AGCD01030464;AGCD01030465;AGCD01030466;AGCD01030467;AGCD01030468;AGCD01030469;AGCD01030470;AGCD01030471;AGCD01030472;AGCD01030473;AGCD01030474;AGCD01030475;AGCD01030476;AGCD01030477;AGCD01030478;AGCD01030479;AGCD01030480;AGCD01030481;AGCD01030482;GBBH01210686;GBDF01193111;XM_013515898 XP_013371352 MODEL 39132044 rrna 5S_rRNA 5S ribosomal RNA 8968487 protein-coding Slc35e4 solute carrier family 35 member E4 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955455 4853632 4863617 + 102025539 AGCD01045696;GBCQ01129341;XM_005396278 XP_005396335 MODEL 8917032 protein-coding Ago2 argonaute RISC catalytic component 2 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); double-stranded RNA binding (ortholog); endoribonuclease activity, cleaving miRNA-paired mRNA (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); gene expression (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955461 14194268 14260949 - 102023879 AGCD01049048;GBDJ01349391;XM_005398054;XM_005398056;XM_005398057;XM_005398058;XM_005398059;XM_013521312;XM_013521313;XM_013521314 XP_005398111;XP_005398113;XP_005398114;XP_005398115;XP_005398116;XP_013376766;XP_013376767;XP_013376768 MODEL 8832769 protein-coding Alkbh8 alkB homolog 8, tRNA methyltransferase ENCODES a protein that exhibits iron ion binding (ortholog); tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity (ortholog); tRNA (uridine) methyltransferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); tRNA methylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 71 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955412 9875905 9923728 - 102030164 AGCD01012749;AGCD01012750;GBDK01061326;XM_005378030;XM_013511121;XM_013511122 XP_005378087;XP_013366575;XP_013366576 MODEL 8791037 ncrna LOC102008203 uncharacterized LOC102008203 NW_004955465 240199 264436 + 102008203 AGCD01050306;GBDF01083705;XR_001236725;XR_001236726;XR_001236727;XR_001236728;XR_001236729;XR_001236730;XR_263227 MODEL 8765725 protein-coding LOC102012123 uncharacterized LOC102012123 NW_004955436 1773036 1779567 - 102012123 AGCD01033588;AGCD01033589;GBDF01021603;XM_013516581 XP_013372035 MODEL 8732503 protein-coding Cwc27 CWC27 spliceosome associated cyclophilin ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955446 4032493 4230444 - 102022030 AGCD01040031;AGCD01040032;AGCD01040033;AGCD01040034;GBDI01292969;XM_005392634;XM_013518444 XP_005392691;XP_013373898 MODEL 8892063 pseudo LOC102004890 centromere protein I pseudogene NW_004955406 23401612 23413876 + 102004890 AGCD01006171;XM_005375058 MODEL 8767731 ncrna LOC102013696 uncharacterized LOC102013696 NW_004955458 6091649 6099840 + 102013696 AGCD01047549;GBDF01304210;XR_262985 MODEL 8801184 pseudo LOC102008958 AN1-type zinc finger protein 3-like NW_004955497 478857 481296 + 102008958 AGCD01062416 MODEL 9052103 protein-coding A4galt alpha 1,4-galactosyltransferase (P1PK blood group) ENCODES a protein that exhibits galactosyltransferase activity (ortholog); lactosylceramide 4-alpha-galactosyltransferase activity (ortholog); toxic substance binding (ortholog); INVOLVED IN globoside biosynthetic process (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); Caffey disease (ortholog); NOR POLYAGGLUTINATION SYNDROME (ortholog); FOUND IN membrane (ortholog) NW_004955413 28018363 28038359 - 102012849 AGCD01014543;AGCD01014544;GBDJ01313989;XM_005379423 XP_005379480 MODEL 39134063 misc_rna 7SK 7SK RNA 9031176 protein-coding LOC102010909 zinc finger protein 621 NW_004955420 29420972 29427337 - 102010909 AGCD01021500;GBDF01074480;XM_005383573;XM_005383574;XM_013513402;XM_013513403;XM_013513404;XM_013513405;XM_013513406;XM_013513407 XP_005383630;XP_005383631;XP_013368856;XP_013368857;XP_013368858;XP_013368859;XP_013368860;XP_013368861 MODEL 8896999 protein-coding Wdr31 WD repeat domain 31 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955419 14150881 14168256 + 102024679 AGCD01020013;GBDF01067538;XM_005382681 XP_005382738 MODEL 8968169 protein-coding LOC102010112 small proline-rich protein 2F-like NW_004955592 331537 332801 + 102010112 AGCD01076304;GBDI01097716;XM_005414612 XP_005414669 MODEL 8960031 protein-coding Anks1b ankyrin repeat and sterile alpha motif domain containing 1B ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); postsynapse to nucleus signaling pathway (ortholog); receptor localization to synapse (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); nucleoplasm (ortholog) NW_004955405 34701613 35776076 - 102016229 AGCD01005382;AGCD01005383;AGCD01005384;AGCD01005385;AGCD01005386;AGCD01005387;AGCD01005388;AGCD01005389;AGCD01005390;AGCD01005391;AGCD01005392;AGCD01005393;AGCD01005394;AGCD01005395;AGCD01005396;AGCD01005397;AGCD01005398;AGCD01005399;AGCD01005400;GBDF01207486;GBDJ01338802;XM_005374511;XM_013518589 XP_005374568;XP_013374043 MODEL 8876276 protein-coding Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN cellular response to BMP stimulus (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) NW_004955450 525313 581006 + 102006186 AGCD01042339;GBCE01142109;XM_005393436;XM_013518885;XM_013518886;XM_013518887;XM_013518888;XM_013518890 XP_005393493;XP_013374339;XP_013374340;XP_013374341;XP_013374342;XP_013374344 MODEL 730469593 snorna ACEA_U3 ACEA small nucleolar RNA U3 39131851 rrna 5S_rRNA 5S ribosomal RNA 39134371 misc_rna 7SK 7SK RNA 9017677 protein-coding C1qa complement C1q A chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN astrocyte activation (ortholog); complement activation, classical pathway (ortholog); complement-mediated synapse pruning (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Brain Injuries (ortholog); C1q Deficiency (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); complement component C1q complex (ortholog) NW_004955452 2753362 2756220 + 102012920 AGCD01043903;GBDK01006456;XM_013519754 XP_013375208 MODEL 9025490 protein-coding Sfswap splicing factor SWAP INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA 5'-splice site recognition (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955482 808684 871377 - 102026112 AGCD01057189;GBDI01121728;XM_005402976;XM_005402977;XM_005402978;XM_005402980;XM_005402981;XM_005402983;XM_005402984 XP_005403033;XP_005403034;XP_005403035;XP_005403037;XP_005403038;XP_005403040;XP_005403041 MODEL 8818367 protein-coding Lonp1 lon peptidase 1, mitochondrial ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN 'de novo' protein folding (ortholog); cellular response to oxidative stress (ortholog); mitochondrial protein catabolic process (ortholog); ASSOCIATED WITH Addison's disease (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955495 3712173 3729556 + 102024354 AGCD01061879;GBDI01075951;XM_005405760;XM_013505197 XP_005405817;XP_013360651 MODEL 9033701 ncrna LOC102005939 uncharacterized LOC102005939 NW_004955420 14870439 14874125 + 102005939 AGCD01020956;GBDI01175768;XR_001233663;XR_001233664;XR_001233665 MODEL 8911227 pseudo LOC102008568 ubiquitin-protein ligase E3C-like NW_004955532 1668535 1681482 + 102008568 AGCD01070197 MODEL 8843157 protein-coding Dmp1 dentin matrix acidic phosphoprotein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); regulation of enamel mineralization (ortholog); ASSOCIATED WITH autosomal recessive hypophosphatemic rickets (ortholog); Hypophosphatemic Rickets, Autosomal Recessive, 1 (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955474 2188090 2200284 - 102014350 AGCD01054281;AGCD01054282;GBCE01002429;JN414501;XM_005401334 AEP17666;XP_005401391 MODEL 8979047 protein-coding Plet1 placenta expressed transcript 1 INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); positive regulation of cell migration (ortholog); wound healing, spreading of epidermal cells (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog) NW_004955412 13902940 13912761 - 102030508 AGCD01012847;GBDJ01016895;XM_005378121 XP_005378178 MODEL 8788361 protein-coding Cbr3 carbonyl reductase 3 ENCODES a protein that exhibits 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); carbonyl reductase (NADPH) activity (ortholog); NADPH binding (ortholog); INVOLVED IN cognition (ortholog); phylloquinone catabolic process (ortholog); vitamin K metabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Familial Platelet Disorder with Associated Myeloid Malignancy (ortholog); Mouth Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955407 35419674 35428270 + 102007301 AGCD01007742;GBDI01006352;XM_005375724;XM_013504553 XP_005375781;XP_013360007 MODEL 8732142 protein-coding Cldn34 claudin 34 NW_004955544 3190014 3190573 + 102009880 AGCD01071750;XM_013508184 XP_013363638 MODEL 8876856 protein-coding Sft2d1 SFT2 domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog) NW_004955439 15555080 15575698 + 102027115 AGCD01036004;GBBH01064219;XM_005390657 XP_005390714 MODEL 8779096 pseudo LOC102007433 olfactory receptor 2T10-like NW_004955418 29702702 29708070 - 102007433 AGCD01019480 MODEL 9063749 protein-coding Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN learning or memory (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955460 8357890 8479875 - 102010036 AGCD01048515;AGCD01048516;AGCD01048517;GBDJ01276904;XM_005397778;XM_005397779 XP_005397835;XP_005397836 MODEL 9024043 protein-coding Aqp11 aquaporin 11 ENCODES a protein that exhibits glycerol channel activity (ortholog); hydrogen peroxide channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN endosomal lumen acidification (ortholog); glycerol transmembrane transport (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955414 14245682 14260717 - 102009594 AGCD01015144;AGCD01015145;AGCD01015146;GBDF01161980;XM_005379835 XP_005379892 MODEL 8989772 protein-coding Rcan1 regulator of calcineurin 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); locomotion involved in locomotory behavior (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN calcineurin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955407 33873427 33951762 - 102027814 AGCD01007714;AGCD01007715;GBBH01172918;XM_005375706 XP_005375763 MODEL 8794402 protein-coding Il1a interleukin 1 alpha ENCODES a protein that exhibits copper ion binding (ortholog); cytokine activity (ortholog); INVOLVED IN cellular response to heat (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); allergic bronchopulmonary aspergillosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955470 1527710 1538418 + 102024893 AGCD01052644;AGCD01052645;GBDK01021553;XM_005400596 XP_005400653 MODEL 8988367 pseudo LOC102011759 coiled-coil domain-containing protein 117 pseudogene NW_004955414 22445100 22446162 - 102011759 AGCD01015456 MODEL 8750907 ncrna LOC102004139 uncharacterized LOC102004139 NW_004955405 42055348 42065223 + 102004139 AGCD01005576;GBBH01086245;XR_259457 MODEL 8758735 protein-coding LOC102004893 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like NW_004955406 39002433 39011241 - 102004893 AGCD01006617;GBDF01120954;XM_005375239;XM_013522480;XM_013522484;XM_013522488 XP_005375296;XP_013377934;XP_013377938;XP_013377942 MODEL 8905082 protein-coding Ces5a carboxylesterase 5A ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lymphoma (ortholog) NW_004955433 13715780 13745580 - 102011035 AGCD01031698;AGCD01031699;AGCD01031700;GBDF01131660;XM_013516107 XP_013371561 MODEL 8829580 trna Trnah-gug transfer RNA histidine(anticodon GUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955409;NW_004955434;NW_004955409;NW_004955409 58646;8201309;17523204;8203034;8201874 58717;8201380;17523275;8203105;8201945 -;-;-;+;+ 101978821 AGCD01009385;AGCD01032537;AGCD01074502 MODEL 9015050 ncrna LOC102004514 uncharacterized LOC102004514 NW_004955527 2177694 2179801 + 102004514 AGCD01069423;GBBH01097112;XR_264674 MODEL 8877928 protein-coding Bnip2 BCL2 interacting protein 2 INVOLVED IN blastocyst development (ortholog); centrosome cycle (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); Mesothelioma (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 15157411 15180069 + 102011383 AGCD01042782;AGCD01042783;GBDF01002691;XM_005393826;XM_005393827 XP_005393883;XP_005393884 MODEL 9019866 pseudo LOC102009737 nucleophosmin pseudogene NW_004955503 3206385 3225585 - 102009737 AGCD01064619 MODEL 8802803 protein-coding LOC102007048 liver carboxylesterase 1-like NW_004955433 13239101 13268057 - 102007048 AGCD01031682;GBDF01064548;XM_005388323;XM_005388325 XP_005388380;XP_005388382 MODEL 8999884 protein-coding Ago3 argonaute RISC catalytic component 3 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); endoribonuclease activity, cleaving miRNA-paired mRNA (ortholog); miRNA binding (ortholog); INVOLVED IN miRNA processing (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN condensed nuclear chromosome (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955452 13977487 14108729 + 102024642 AGCD01044446;AGCD01044447;AGCD01044448;AGCD01044449;AGCD01044450;GBDJ01416321;XM_005395164;XM_013519526;XM_013519527;XM_013519528;XM_013519529;XM_013519530;XR_262685 XP_005395221;XP_013374980;XP_013374981;XP_013374982;XP_013374983;XP_013374984 MODEL 8830329 protein-coding Cdkn1a cyclin dependent kinase inhibitor 1A ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to amino acid starvation (ortholog); cellular response to cell-matrix adhesion (ortholog); PARTICIPATES IN G1/S transition pathway; Notch signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); Acute Experimental Pancreatitis (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 6254638 6261278 - 102027675 AGCD01034425;AGCD01034426;GBDJ01088492;XM_005389647 XP_005389704 MODEL 8904119 protein-coding Atrx ATRX chromatin remodeler ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); chromatin binding (ortholog); chromo shadow domain binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromosome, subtelomeric region (ortholog); chromosome, telomeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955557 947368 1252701 - 102019208 AGCD01073270;AGCD01073271;AGCD01073272;AGCD01073273;AGCD01073274;AGCD01073275;AGCD01073276;AGCD01073277;AGCD01073278;AGCD01073279;AGCD01073280;AGCD01073281;AGCD01073282;AGCD01073283;GBDK01278909;XM_005412622;XM_013508821;XM_013508822;XM_013508823;XM_013508824;XM_013508825 XP_005412679;XP_013364275;XP_013364276;XP_013364277;XP_013364278;XP_013364279 MODEL 8755613 ncrna LOC102014057 uncharacterized LOC102014057 NW_004955421 26557253 26572498 - 102014057 AGCD01022267;GBDK01109655;XR_260831 MODEL 8885868 ncrna LOC102018317 uncharacterized LOC102018317 NW_004955433 20167425 20217874 - 102018317 AGCD01031882;AGCD01031883;GBDF01278148;XR_001234715;XR_261601 MODEL 9003056 ncrna LOC102013341 uncharacterized LOC102013341 NW_004955438 12804313 12806768 + 102013341 AGCD01035273;GBDF01040134;XR_261928 MODEL 9018057 protein-coding Plg plasminogen ENCODES a protein that exhibits apolipoprotein binding (ortholog); endopeptidase activity (ortholog); enzyme binding (ortholog); INVOLVED IN blood coagulation (ortholog); collagen catabolic process (ortholog); extracellular matrix disassembly (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Arterial Thrombosis (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955439 20317814 20366724 + 102011248 AGCD01036109;AGCD01036110;AGCD01036111;GBDI01245139;XM_005390699;XM_005390700 XP_005390756;XP_005390757 MODEL 8712239 protein-coding Cd59 CD59 molecule (CD59 blood group) ENCODES a protein that exhibits complement binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of activation of membrane attack complex (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute necrotizing pancreatitis (ortholog); alcohol-associated liver disease (ortholog); FOUND IN cell surface (ortholog); compact myelin (ortholog); external side of plasma membrane (ortholog) NW_004955422 12500572 12528738 + 102020811 AGCD01022796;GBDF01046537;XM_005384156 XP_005384213 MODEL 8940002 protein-coding Fhit fragile histidine triad diadenosine triphosphatase ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); adenylylsulfatase activity (ortholog); adenylylsulfate-ammonia adenylyltransferase activity (ortholog); INVOLVED IN diadenosine triphosphate catabolic process (ortholog); DNA replication (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955430 221518 508094 + 102030107 AGCD01029093;AGCD01029094;AGCD01029095;GBDJ01064341;XM_005387532 XP_005387589 MODEL 9011573 ncrna LOC102003096 uncharacterized LOC102003096 NW_004955458 14817424 14818448 + 102003096 AGCD01047848;GBDF01118725;XR_262998 MODEL 9009288 protein-coding Atf2 activating transcription factor 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); cAMP response element binding protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN abducens nucleus development (ortholog); adipose tissue development (ortholog); amelogenesis (ortholog); PARTICIPATES IN adenosine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955449 332563 411218 + 102029572 AGCD01041762;AGCD01041763;AGCD01041764;AGCD01041765;GBDF01052391;XM_005393172 XP_005393229 MODEL 8965578 protein-coding LOC102022409 uncharacterized LOC102022409 NW_004955500 6832058 6838822 - 102022409 AGCD01063892;GBCQ01062310;XM_005406626;XM_013505701;XR_001231495;XR_001231496;XR_001231497;XR_001231498;XR_264239;XR_264241 XP_005406683;XP_013361155 MODEL 39134372 misc_rna 7SK 7SK RNA 39131375 protein-coding DMP1 dentin matrix acidic phosphoprotein 1 8999609 protein-coding Snx9 sorting nexin 9 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); Arp2/3 complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cuticular plate (ortholog) NW_004955439 4422385 4503408 - 102015984 AGCD01035709;AGCD01035710;AGCD01035711;GBDI01118897;XM_005390533 XP_005390590 MODEL 9058595 protein-coding C1qb complement C1q B chain ENCODES a protein that exhibits identical protein binding (ortholog); IgG binding (ortholog); IgM binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); inner ear development (ortholog); response to glucocorticoid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); C1q Deficiency (ortholog); C1q Deficiency 1 (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); complement component C1q complex (ortholog) NW_004955452 2765844 2771695 + 102010120 AGCD01043903;GBCE01000145;XM_005394745;XM_013519694 XP_005394802;XP_013375148 MODEL 39132045 rrna 5S_rRNA 5S ribosomal RNA 8914727 protein-coding Slc35f1 solute carrier family 35 member F1 ASSOCIATED WITH atrial fibrillation (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN synaptic vesicle membrane (ortholog) NW_004955436 1096156 1312183 + 102008885 AGCD01033569;AGCD01033570;AGCD01033571;AGCD01033572;AGCD01033573;AGCD01033574;AGCD01033575;GBDF01183323;XM_005389123 XP_005389180 MODEL 8810417 ncrna LOC102008204 uncharacterized LOC102008204 NW_004955412 4776167 4820984 - 102008204 AGCD01012604;AGCD01012605;AGCD01012606;GBDF01156686;XR_001232850;XR_001232851;XR_259970;XR_259971 MODEL 8749082 protein-coding Allc allantoicase ENCODES a protein that exhibits allantoicase activity (ortholog); INVOLVED IN response to calcium ion (ortholog); response to magnesium ion (ortholog); response to pH (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955487 3757362 3774067 - 102016601 AGCD01059293;GBDF01007362;XM_005404369;XM_005404370 XP_005404426;XP_005404427 MODEL 8935205 pseudo LOC102008572 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955439 2667966 2668976 - 102008572 AGCD01035656 MODEL 8767658 pseudo LOC102007434 eukaryotic translation initiation factor 1 pseudogene NW_004955419 15211183 15211577 - 102007434 AGCD01020066 MODEL 9007281 protein-coding Sft2d2 SFT2 domain containing 2 ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955462 8878387 8897523 - 102018369 AGCD01049329;AGCD01049330;AGCD01049331;GBDK01080878;XM_005398208 XP_005398265 MODEL 8927319 ncrna LOC102008960 uncharacterized LOC102008960 NW_004955500 4757497 4758238 - 102008960 AGCD01063810;XR_264224 MODEL 8926852 protein-coding A4gnt alpha-1,4-N-acetylglucosaminyltransferase ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of epithelial cell proliferation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); melanoma (ortholog) NW_004955501 881851 887977 + 102016934 AGCD01064043;XM_005406864 XP_005406921 MODEL 9035916 pseudo LOC102004140 tRNA methyltransferase 10 homolog A pseudogene NW_004955453 3075154 3075940 - 102004140 AGCD01044648 MODEL 8957251 protein-coding LOC102010114 vomeronasal type-1 receptor 4-like NW_004955603 478161 479087 + 102010114 AGCD01076848;XM_005414845 XP_005414902 MODEL 8944149 protein-coding Wdr33 WD repeat domain 33 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN fibrillar center (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog) NW_004955459 2740465 2841376 + 102022789 AGCD01048001;AGCD01048002;AGCD01048003;GBDF01081918;XM_005397576;XM_005397577;XM_005397580;XM_005397581;XM_005397582;XM_005397587;XM_005397588;XM_005397589;XM_013521041;XM_013521042;XM_013521044;XM_013521045;XM_013521046 XP_005397633;XP_005397634;XP_005397637;XP_005397638;XP_005397639;XP_005397644;XP_005397645;XP_005397646;XP_013376495;XP_013376496;XP_013376498;XP_013376499;XP_013376500 MODEL 730469032 snorna ACEA_U3 ACEA small nucleolar RNA U3 39131852 rrna 5S_rRNA 5S ribosomal RNA 8910465 protein-coding LOC102010912 claudin-34-like NW_004955493 6423748 6424605 - 102010912 AGCD01061103;GBDF01011330;GBDK01381044;XM_005405150 XP_005405207 MODEL 9047257 protein-coding Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif 8 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Moebius syndrome (ortholog) NW_004955412 31295436 31336781 - 102005788 AGCD01013334;AGCD01013335;AGCD01013336;GBBH01073135;GBDJ01220127;XM_013510983 XP_013366437 MODEL 8935628 protein-coding Anks3 ankyrin repeat and sterile alpha motif domain containing 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Dwarfism (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog) NW_004955442 12752468 12775081 + 102006078 AGCD01037745;GBDI01217752;XM_005391276;XM_013517712;XM_013517713;XM_013517714;XM_013517715;XM_013517716;XM_013517717 XP_005391333;XP_013373166;XP_013373167;XP_013373168;XP_013373169;XP_013373170;XP_013373171 MODEL 8727323 protein-coding LOC102005943 myoD family inhibitor domain-containing protein-like NW_004955421 17734841 17752220 + 102005943 AGCD01022030;XM_005383926 XP_005383983 MODEL 8880539 protein-coding Lonp2 lon peptidase 2, peroxisomal ENCODES a protein that exhibits enzyme binding (ortholog); peptidase activity (ortholog); protease binding (ortholog); INVOLVED IN protein processing (ortholog); protein targeting to peroxisome (ortholog); regulation of fatty acid beta-oxidation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); peroxisomal matrix (ortholog) NW_004955474 6991371 7084008 - 102007888 AGCD01054512;AGCD01054513;GBDI01079460;XM_005401402 XP_005401459 MODEL 8889380 protein-coding Eprs1 glutamyl-prolyl-tRNA synthetase 1 ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to type II interferon (ortholog); glutamyl-tRNA aminoacylation (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955520 3550558 3606015 + 102025157 AGCD01068105;AGCD01068106;GBDF01046961;XM_005409277 XP_005409334 MODEL 8967697 protein-coding Cwf19l1 CWF19 like cell cycle control factor 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 17 (ortholog); FOUND IN nucleus (ortholog) NW_004955507 6106245 6136305 - 102021153 AGCD01065697;GBCQ01175305;XM_005407687;XM_005407688;XM_013506212;XM_013506213 XP_005407744;XP_005407745;XP_013361666;XP_013361667 MODEL 8827258 pseudo LOC102013697 DNA-directed RNA polymerase II subunit RPB3 pseudogene NW_004955409 29619602 29621572 + 102013697 AGCD01010277 MODEL 8708046 protein-coding Cldn4 claudin 4 INVOLVED IN circadian rhythm (ortholog); establishment of skin barrier (ortholog); female pregnancy (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); invasive ductal carcinoma (ortholog); malignant mesothelioma (ortholog); FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955456 13961743 13965498 - 102022359 AGCD01046629;GBDJ01020810;XM_005396763 XP_005396820 MODEL 8773021 protein-coding Cbr4 carbonyl reductase 4 ENCODES a protein that exhibits 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); NAD(P)H dehydrogenase (quinone) activity (ortholog); NADPH binding (ortholog); INVOLVED IN daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxidoreductase complex (ortholog) NW_004955403 37201474 37226414 + 102007722 AGCD01002564;AGCD01002565;GBDF01005826;XM_005373573;XM_005373574 XP_005373630;XP_005373631 MODEL 8948583 protein-coding Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); positive regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); congestive heart failure (ortholog); esophageal cancer (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog) NW_004955532 827112 896487 - 102006281 AGCD01070155;AGCD01070156;AGCD01070157;GBDF01007082;XM_005410362 XP_005410419 MODEL 9042883 protein-coding Rcan2 regulator of calcineurin 2 INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); locomotion involved in locomotory behavior (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog) NW_004955437 11243195 11406488 - 102004320 AGCD01034572;AGCD01034573;AGCD01034574;GBDF01044432;XM_005389848;XM_005389850;XM_005389852;XM_005389853;XM_005389854;XM_005389855 XP_005389905;XP_005389907;XP_005389909;XP_005389910;XP_005389911;XP_005389912 MODEL 8829452 protein-coding Atxn1 ataxin 1 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); poly(G) binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); brain development (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear inclusion body (ortholog) NW_004955483 9159877 9559453 + 102026869 AGCD01057857;AGCD01057858;AGCD01057859;AGCD01057860;AGCD01057861;GBDK01169335;XM_013503811;XM_013503812;XM_013503813;XM_013503814;XM_013503815;XM_013503816;XM_013503817;XR_001231022;XR_001231023 XP_013359265;XP_013359266;XP_013359267;XP_013359268;XP_013359269;XP_013359270;XP_013359271 MODEL 8809551 protein-coding Rrp36 ribosomal RNA processing 36 INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955437 8995983 9001517 + 102027568 AGCD01034512;GBCB01041010;XM_005389737;XM_013516897 XP_005389794;XP_013372351 MODEL 39134190 misc_rna 7SK 7SK RNA 9061998 pseudo LOC102004895 60S acidic ribosomal protein P0-like NW_004955406 38088292 38103146 + 102004895 AGCD01006590;AGCD01006591;AGCD01006592;AGCD01006593;AGCD01006594 MODEL 8999086 protein-coding Il1b interleukin 1 beta ENCODES a protein that exhibits cytokine activity (ortholog); integrin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cellular response to antibiotic (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH otitis media; Otitis Media with Effusion; abdominal aortic aneurysm (ortholog); FOUND IN extracellular region (ortholog); interleukin-1 receptor complex (ortholog); lysosome (ortholog) NW_004955470 1486936 1491888 + 102024552 AGCD01052642;GBCE01179444;XM_005400595 XP_005400652 MODEL 9000811 ncrna LOC102008961 uncharacterized LOC102008961 NW_004955500 7699030 7703323 + 102008961 AGCD01063941;GBDF01005578;XR_001231468 MODEL 8857242 protein-coding Cetn1 centrin 1 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); heterotrimeric G-protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to heat (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); microtubule organizing center (ortholog) NW_004955402 9381400 9382158 - 102025525 AGCD01000214;GBDF01007446;XM_005372681 XP_005372738 MODEL 8859400 protein-coding LOC102012132 keratin, type II cytoskeletal 72 NW_004955547 2991156 3005189 - 102012132 AGCD01072303;XM_005411950 XP_005412007 MODEL 8991138 protein-coding Atf3 activating transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); endoplasmic reticulum unfolded protein response (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); colon adenocarcinoma (ortholog); FOUND IN CHOP-ATF3 complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955406 4875672 4889173 - 102020412 AGCD01005709;GBDJ01179405;XM_005374741 XP_005374798 MODEL 8793518 protein-coding Soat1 sterol O-acyltransferase 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol O-acyltransferase activity (ortholog); fatty-acyl-CoA binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic atherosclerosis (ortholog); atherosclerosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955406 18644351 18708666 + 102022462 AGCD01006051;AGCD01006052;AGCD01006053;AGCD01006054;AGCD01006055;AGCD01006056;AGCD01006057;GBBH01180582;GBDJ01300596;XM_013521162 XP_013376616 MODEL 9019716 protein-coding Slc35f2 solute carrier family 35 member F2 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); tRNA queuosine(34) biosynthetic process from salvaged queuine (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955412 10111134 10156575 - 102003744 AGCD01012757;AGCD01012758;GBCQ01037767;XM_013511242 XP_013366696 MODEL 9003855 ncrna LOC102009738 uncharacterized LOC102009738 NW_004955504 990784 1006063 + 102009738 AGCD01064834;GBDI01386594;XR_001231555;XR_001231556;XR_001231557;XR_001231558;XR_001231559;XR_001231560;XR_001231561;XR_001231562;XR_001231563;XR_001231564;XR_001231565;XR_001231566;XR_001231567;XR_001231568;XR_264274;XR_264276 MODEL 39134064 misc_rna 7SK 7SK RNA 8916622 protein-coding LOC102014065 guanylate-binding protein 4-like NW_004955423 5188894 5203238 + 102014065 AGCD01023556;GBDI01220545;XM_005385105;XM_005385106 XP_005385162;XP_005385163 MODEL 8922621 protein-coding LOC102018319 zinc finger protein 709-like NW_004955524 62567 82782 + 102018319 AGCD01068663;GBCE01006763;XM_005409477;XM_013507335;XM_013507336;XM_013507337 XP_005409534;XP_013362789;XP_013362790;XP_013362791 MODEL 8927726 protein-coding Ago4 argonaute RISC component 4 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); miRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN male gonad development (ortholog); male meiotic nuclear division (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); epilepsy (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog) NW_004955452 13882416 13922590 + 102023551 AGCD01044442;AGCD01044443;GBBH01187718;GBBH01187721;XM_013519611 XP_013375065 MODEL 8993614 protein-coding Cdkn1b cyclin dependent kinase inhibitor 1B ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein kinase regulator activity (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN autophagic cell death (ortholog); cellular response to antibiotic (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN forkhead class A signaling pathway; G1/S transition pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); Brain Injuries (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955413 9615542 9620542 + 102018818 AGCD01013908;GBDI01121227;HM069343;XM_005378971 ADI23935;XP_005379028 MODEL 8866344 protein-coding Aqp2 aquaporin 2 ENCODES a protein that exhibits actin binding (ortholog); glycerol transmembrane transporter activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); cell volume homeostasis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH cardiomyopathy (ortholog); diabetes insipidus (ortholog); diabetic ketoacidosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); clathrin-coated vesicle (ortholog) NW_004955547 547770 555764 + 102009548 AGCD01072162;GBCQ01008561;XM_005411855;XM_005411856;XM_013508504;XM_013508505 XP_005411912;XP_005411913;XP_013363958;XP_013363959 MODEL 8737995 pseudo LOC102007436 eukaryotic peptide chain release factor subunit 1 pseudogene NW_004955484 8653605 8660088 + 102007436 AGCD01058393 MODEL 8740017 pseudo LOC102011763 40S ribosomal protein S24 pseudogene NW_004955478 9920867 9921511 - 102011763 AGCD01056109 MODEL 8756050 ncrna LOC102004516 uncharacterized LOC102004516 NW_004955436 16301782 16314045 + 102004516 AGCD01033912;GBDF01159287;XR_261792 MODEL 9036604 trna Trnai-aau transfer RNA isoleucine (anticodon AAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978794 AGCD01050493;AGCD01050590;AGCD01050591;AGCD01050597;AGCD01051466;AGCD01051471;AGCD01057606;AGCD01077147 MODEL 8974532 protein-coding Plgrkt plasminogen receptor with a C-terminal lysine INVOLVED IN positive regulation of plasminogen activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) NW_004955434 9424793 9468055 - 102030660 AGCD01032301;AGCD01032302;AGCD01032303;GBDJ01355387;XM_005388659 XP_005388716 MODEL 8912778 pseudo LOC102010116 oxysterol-binding protein-related protein 8-like NW_004955648 80516 86972 - 102010116 AGCD01077770 MODEL 39131853 rrna 5S_rRNA 5S ribosomal RNA 8791415 protein-coding LOC102022412 prostaglandin-E(2) 9-reductase-like NW_004955429 524674 542300 - 102022412 AGCD01028365;GBCQ01005033;XM_005386853;XM_013515393 XP_005386910;XP_013370847 MODEL 8968950 protein-coding Aaas aladin WD repeat nucleoporin INVOLVED IN fertilization (ortholog); glutathione metabolic process (ortholog); learning (ortholog); ASSOCIATED WITH achalasia (ortholog); Adrenal Insufficiency (ortholog); Alacrima (ortholog); FOUND IN mitotic spindle (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955458 567487 577228 - 102019145 AGCD01047134;AGCD01047135;GBDF01011285;XM_005397171 XP_005397228 MODEL 8731175 protein-coding Bnip3 BCL2 interacting protein 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN autophagic cell death (ortholog); brown fat cell differentiation (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Chronic Intermittent Hypoxia (ortholog); chronic obstructive pulmonary disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955477 9621812 9630406 - 102022813 AGCD01055677;GBCQ01005103;GBDI01001865;XM_005402035 XP_005402092 MODEL 8759747 pseudo LOC102010913 cationic trypsin-3-like NW_004955494 1211669 1216586 + 102010913 AGCD01061392 MODEL 8834922 protein-coding Dmpk DM1 protein kinase ENCODES a protein that exhibits ATP binding (ortholog); myosin phosphatase regulator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); muscle cell apoptotic process (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955574 225615 237526 - 102020856 AGCD01075093;GBBH01011956;XM_005413811;XM_005413812;XM_005413813;XM_013509518;XM_013509519;XM_013509520;XM_013509521;XM_013509522;XM_013509523;XM_013509524;XM_013509525;XM_013509526 XP_005413868;XP_005413869;XP_005413870;XP_013364972;XP_013364973;XP_013364974;XP_013364975;XP_013364976;XP_013364977;XP_013364978;XP_013364979;XP_013364980 MODEL 8905709 ncrna LOC102007052 uncharacterized LOC102007052 NW_004955436 7964613 7966777 - 102007052 AGCD01033721;GBDF01079769;XR_261769 MODEL 39132046 rrna 5S_rRNA 5S ribosomal RNA 9020458 protein-coding Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN aorta morphogenesis (ortholog); camera-type eye morphogenesis (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) NW_004955517 1302560 1443708 + 102029105 AGCD01067596;AGCD01067597;AGCD01067598;GBBH01004780;GBDJ01010259;XM_013506939 XP_013362393 MODEL 8798678 protein-coding Alms1 ALMS1 centrosome and basal body associated protein ENCODES a protein that exhibits alpha-actinin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); Alstrom syndrome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955424 12130496 12258684 - 102015416 AGCD01024596;AGCD01024597;AGCD01024598;AGCD01024599;AGCD01024600;GBDF01000586;GBDF01000588;XM_013514678 XP_013370132 MODEL 8753406 protein-coding LOC102008206 olfactory receptor 2B6-like NW_004955465 13463709 13464717 + 102008206 AGCD01050609;XM_005398954 XP_005399011 MODEL 8798604 pseudo LOC102013698 V-type proton ATPase subunit G 1 pseudogene NW_004955409 26746607 26747019 + 102013698 AGCD01010201 MODEL 9055045 ncrna LOC102013342 uncharacterized LOC102013342 NW_004955440 5501646 5568701 - 102013342 AGCD01036274;AGCD01036275;AGCD01036276;GBCE01049183;XR_001235281;XR_001235282;XR_001235283 MODEL 9043884 protein-coding Dmrt1 doublesex and mab-3 related transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell morphogenesis (ortholog); developmental process involved in reproduction (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,XY sex reversal 4 (ortholog); Adrenal Insufficiency (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955434 5341519 5448049 + 102014704 AGCD01032188;AGCD01032189;GBDF01118169;XM_005388599;XM_013516377 XP_005388656;XP_013371831 MODEL 8731927 protein-coding Sft2d3 SFT2 domain containing 3 NW_004955459 2842452 2845045 - 102026837 AGCD01048003;GBDI01227745;XM_005397594 XP_005397651 MODEL 8751583 ncrna LOC102003099 uncharacterized LOC102003099 NW_004955462 10959270 10994353 - 102003099 AGCD01049379;AGCD01049380;GBDF01082820;XR_001236594;XR_263124;XR_263125;XR_263126 MODEL 8961440 protein-coding Prkar2b protein kinase cAMP-dependent type II regulatory subunit beta ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); learning (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); congestive heart failure (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog); ciliary base (ortholog) NW_004955410 11529530 11620085 + 102017752 AGCD01010826;AGCD01010827;AGCD01010828;AGCD01010829;GBCQ01036114;XM_013510492 XP_013365946 MODEL 39134373 misc_rna 7SK 7SK RNA 8979305 protein-coding Fhl1 four and a half LIM domains 1 ENCODES a protein that exhibits channel activator activity (ortholog); potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); centronuclear myopathy (ortholog); diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955489 8888845 8944778 - 102014909 AGCD01060024;GBCQ01006174;XM_005404596;XM_005404598;XM_013504495;XM_013504496 XP_005404653;XP_005404655;XP_013359949;XP_013359950 MODEL 9048252 protein-coding C1qbp complement C1q binding protein ENCODES a protein that exhibits adrenergic receptor binding (ortholog); C5-methylcytidine-containing RNA reader activity (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); mitochondrial RNA catabolic process (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 10788142 10792272 - 102027161 AGCD01051583;GBDJ01090000;GBDK01129135;XM_013522096 XP_013377550 MODEL 8737194 protein-coding LOC102008576 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like NW_004955546 1452766 1495831 + 102008576 AGCD01072068;AGCD01072069;GBBH01214822;GBDI01370020;XM_013508414 XP_013363868 MODEL 8738867 pseudo LOC102005947 protein FAM72A-like NW_004955497 509767 511648 - 102005947 AGCD01062421 MODEL 8738388 protein-coding Anks4b ankyrin repeat and sterile alpha motif domain containing 4B ENCODES a protein that exhibits myosin binding (ortholog); INVOLVED IN brush border assembly (ortholog); protein localization to microvillus (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum membrane (ortholog); microvillus (ortholog) NW_004955493 429339 439456 + 102006356 AGCD01060851;GBCQ01072081;XM_005405050 XP_005405107 MODEL 8950279 protein-coding LOC102022413 synaptotagmin-15 ASSOCIATED WITH acute myeloid leukemia (ortholog); stomach cancer (ortholog); FOUND IN membrane (ortholog) NW_004955510 6130901 6145832 - 102022413 AGCD01066302;GBDF01305008;XM_005415248 XP_005415305 MODEL 8955739 ncrna LOC102010918 uncharacterized LOC102010918 NW_004955496 4040916 4059796 - 102010918 AGCD01062307;AGCD01062308;GBDF01279073;XR_264175 MODEL 8916341 protein-coding Cd5l CD5 molecule like INVOLVED IN positive regulation of complement-dependent cytotoxicity (ortholog); positive regulation of phagocytosis, engulfment (ortholog); regulation of complement activation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955468 9670958 9690331 - 102019793 AGCD01052052;AGCD01052053;GBDF01075765;XM_005400134 XP_005400191 MODEL 8929377 protein-coding Wdr35 WD repeat domain 35 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); brachydactyly (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955469 2484972 2546562 - 102011643 AGCD01052277;GBBH01005246;XM_005400340 XP_005400397 MODEL 8893761 pseudo LOC102009739 ubiquitin-conjugating enzyme E2 E3 pseudogene NW_004955427 22033843 22034577 - 102009739 AGCD01027464 MODEL 39134065 misc_rna 7SK 7SK RNA 8926012 protein-coding LOC102004142 uncharacterized LOC102004142 NW_004955456 913644 917256 + 102004142 AGCD01046223;GBDF01177210;XM_005396878 XP_005396935 MODEL 39134191 misc_rna 7SK 7SK RNA 8710536 protein-coding Rrp7a ribosomal RNA processing 7 homolog A INVOLVED IN blastocyst formation (ortholog); cilium disassembly (ortholog); protein localization to nucleolus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955413 27936427 27941311 - 102011428 AGCD01014538;GBCE01004837;XM_005379418 XP_005379475 MODEL 8994890 ncrna LOC102007447 uncharacterized LOC102007447 NW_004955496 3205929 3212240 - 102007447 AGCD01062284;GBCQ01088384;XR_264174 MODEL 8866214 protein-coding LOC102004898 uncharacterized LOC102004898 NW_004955407 18817496 18870851 - 102004898 AGCD01007282;AGCD01007283;AGCD01007284;AGCD01007285;AGCD01007286;GBDF01036000;XM_013505906 XP_013361360 MODEL 8724654 protein-coding LOC102008964 zinc finger CCHC-type and RNA-binding motif-containing protein 1 NW_004955426 18643581 18647670 - 102008964 AGCD01026526;AGCD01026527;GBCC01039405;XM_005386263 XP_005386320 MODEL 730468950 snorna ACEA_U3 ACEA small nucleolar RNA U3 8777636 protein-coding LOC102012139 gonadotropin-releasing hormone receptor NW_004955447 5179231 5190335 + 102012139 AGCD01040748;XM_005392835;XM_005392836 XP_005392892;XP_005392893 MODEL 8882687 protein-coding Lonrf1 LON peptidase N-terminal domain and ring finger 1 ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lymphoma (ortholog) NW_004955463 4282609 4318716 + 102005236 AGCD01049603;AGCD01049604;GBBH01110840;XM_005398466 XP_005398523 MODEL 8841814 protein-coding Eps15 epidermal growth factor receptor pathway substrate 15 ENCODES a protein that exhibits identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); endocytic recycling (ortholog); Golgi to endosome transport (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN aggresome (ortholog); AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog) NW_004955464 7569570 7688098 + 102025773 AGCD01050065;AGCD01050066;AGCD01050067;GBCB01020993;XM_005398604;XM_013521700;XM_013521701;XM_013521702 XP_005398661;XP_013377154;XP_013377155;XP_013377156 MODEL 8937439 protein-coding Cldn5 claudin 5 INVOLVED IN cell-cell junction assembly (ortholog); establishment of blood-retinal barrier (ortholog); establishment of endothelial barrier (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); developmental dysplasia of the hip (ortholog); epilepsy (ortholog); FOUND IN apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955442 18509501 18511267 + 102007600 AGCD01038009;GBDK01015754;XM_005391775 XP_005391832 MODEL 8737858 protein-coding Slc35f3 solute carrier family 35 member F3 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); thiamine transport (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955492 5349445 5661186 - 102028980 AGCD01060744;AGCD01060745;AGCD01060746;AGCD01060747;AGCD01060748;AGCD01060749;AGCD01060750;GBBH01193275;XM_005404959;XM_005404960 XP_005405016;XP_005405017 MODEL 8881462 protein-coding LOC102018320 zinc finger protein OZF-like NW_004955524 2146250 2150075 - 102018320 AGCD01068800;GBCE01006151;XM_005409651 XP_005409708 MODEL 8947013 ncrna LOC102014067 uncharacterized LOC102014067 NW_004955425 2457947 2463823 + 102014067 AGCD01025263;GBDF01147077;XR_261121 MODEL 8938760 protein-coding LOC102008207 glutathione peroxidase 6 NW_004955465 13770938 13774725 - 102008207 AGCD01050623;GBBH01092321;GBDJ01389285;XM_013521797 XP_013377251 MODEL 8789735 protein-coding Cbs cystathionine beta-synthase ENCODES a protein that exhibits carbon monoxide binding (ortholog); cystathionine beta-synthase activity (ortholog); enzyme binding (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); blood vessel remodeling (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); PARTICIPATES IN cystathioninuria pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); Ataxia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955407 38924355 38939790 + 102005896 AGCD01007815;GBDF01223345;XM_005375796;XM_005375797;XM_005375798;XM_005375799 XP_005375853;XP_005375854;XP_005375855;XP_005375856 MODEL 8975514 protein-coding Cdkn1c cyclin dependent kinase inhibitor 1C ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); molecular function inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adrenal gland development (ortholog); camera-type eye development (ortholog); digestive system development (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Beckwith-Wiedemann syndrome (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 14576971 14578868 - 102014916 AGCD01022860;GBCC01021598;GBDJ01004462;XM_005384956 XP_005385013 MODEL 8763629 protein-coding Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN phosphatidic acid biosynthetic process (ortholog); positive regulation of cytokine production (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); exfoliation syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 633522 642659 - 102012574 AGCD01034152;GBBH01114504;XM_005389423;XM_005389424;XM_005389425 XP_005389480;XP_005389481;XP_005389482 MODEL 9041084 protein-coding Atxn10 ataxin 10 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); nervous system development (ortholog); neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955413 29956904 30104868 + 102014038 AGCD01014598;AGCD01014599;AGCD01014600;AGCD01014601;GBCQ01014279;GBDJ01075642;XM_013511506 XP_013366960 MODEL 8735886 protein-coding Il1f10 interleukin 1 family member 10 ASSOCIATED WITH stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955470 1198185 1206032 - 102021648 AGCD01052630;GBCC01028004;XM_005400587;XM_013522701 XP_005400644;XP_013378155 MODEL 8837231 protein-coding Rcan3 RCAN family member 3 ENCODES a protein that exhibits phosphatase binding (ortholog); troponin I binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955452 4285602 4313904 + 102028372 AGCD01043970;AGCD01043971;GBCE01108458;GBDJ01062277;XM_013519579 XP_013375033 MODEL 9049230 ncrna LOC102013345 uncharacterized LOC102013345 NW_004955442 8943995 9025234 - 102013345 AGCD01037655;AGCD01037656;AGCD01037657;AGCD01037658;AGCD01037659;AGCD01037660;GBDF01040016;XR_262126 MODEL 8749671 protein-coding Aqp3 aquaporin 3 (Gill blood group) ENCODES a protein that exhibits glycerol channel activity (ortholog); identical protein binding (ortholog); polyol transmembrane transporter activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); glycerol transmembrane transport (ortholog); odontogenesis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH brain edema (ortholog); brain ischemia (ortholog); Esophageal Neoplasms (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955472 2234770 2239753 + 102007885 AGCD01053446;GBBH01003723;XM_005401098 XP_005401155 MODEL 8847004 protein-coding LOC102004517 trace amine-associated receptor 7a-like NW_004955436 13040357 13041557 - 102004517 AGCD01033852;XM_013516593 XP_013372047 MODEL 8718507 protein-coding Cetn2 centrin 2 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); heterotrimeric G-protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); nucleotide-excision repair (ortholog); regulation of cytokinesis (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN 9+2 motile cilium (ortholog); apical part of cell (ortholog); centriole (ortholog) NW_004955498 8131356 8135751 - 102012104 AGCD01063167;GBCQ01000744;XM_005406455 XP_005406512 MODEL 9047211 pseudo LOC102003102 HAUS augmin-like complex subunit 8 NW_004955464 11500987 11501958 - 102003102 AGCD01050155 MODEL 8910985 protein-coding Plin1 perilipin 1 ENCODES a protein that exhibits phospholipid binding (ortholog); protein sequestering activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cellular response to cold (ortholog); lipid catabolic process (ortholog); negative regulation of lipid catabolic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); diabetes mellitus (ortholog); familial partial lipodystrophy (ortholog); FOUND IN cell periphery (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955416 15538309 15549275 + 102026001 AGCD01017335;GBDI01016533;XM_013512551;XM_013512552 XP_013368005;XP_013368006 MODEL 8728120 ncrna LOC102007448 uncharacterized LOC102007448 NW_004955426 3095664 3103993 - 102007448 AGCD01026065;GBDI01311716;XR_261183 MODEL 8922785 ncrna LOC102008965 uncharacterized LOC102008965 NW_004955508 2550384 2643799 + 102008965 AGCD01065788;AGCD01065789;AGCD01065790;AGCD01065791;GBDF01249960;XR_264386 MODEL 8758135 protein-coding C1qc complement C1q C chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); negative regulation of granulocyte differentiation (ortholog); negative regulation of macrophage differentiation (ortholog); ASSOCIATED WITH C1q Deficiency (ortholog); C1q Deficiency 3 (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); complement component C1q complex (ortholog) NW_004955452 2759079 2762522 + 102009794 AGCD01043903;GBDI01004925;XM_005394744 XP_005394801 MODEL 8770409 ncrna LOC102013702 uncharacterized LOC102013702 NW_004955463 3486518 3488336 - 102013702 AGCD01049587;GBDF01214538;XR_263142 MODEL 9066623 protein-coding Cd6 CD6 molecule ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); lipoteichoic acid binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); heterophilic cell-cell adhesion (ortholog); immunological synapse formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); immunological synapse (ortholog) NW_004955511 5592176 5617421 + 102019831 AGCD01066572;AGCD01066573;GBDI01000697;GBDI01000713;XM_013506456 XP_013361910 MODEL 9021890 pseudo LOC102007053 protein kinase C iota type pseudogene NW_004955530 521029 523694 + 102007053 AGCD01069854;XM_005410110 MODEL 8854923 protein-coding Alox12b arachidonate 12-lipoxygenase, 12R type ENCODES a protein that exhibits arachidonate 12(R)-lipoxygenase activity (ortholog); arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 8(R)-lipoxygenase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); bicellular tight junction assembly (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH adenocarcinoma (ortholog); autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955467 8876186 8887980 + 102025448 AGCD01051477;GBDI01086683;XM_005399437 XP_005399494 MODEL 8853605 pseudo LOC102014068 60S ribosomal protein L12-like NW_004955425 932011 934034 - 102014068 AGCD01025206 MODEL 8937933 protein-coding Cwf19l2 CWF19 like cell cycle control factor 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); single fertilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); post-mRNA release spliceosomal complex (ortholog); spliceosomal complex (ortholog) NW_004955412 9758751 9861019 - 102027957 AGCD01012746;AGCD01012747;AGCD01012748;AGCD01012749;GBDK01116496;XM_005378021 XP_005378078 MODEL 8959521 protein-coding Sfta2 surfactant associated 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955583 865226 866360 - 102022442 AGCD01075871;GBDK01021573;XM_005414328 XP_005414385 MODEL 8707092 trna Trnai-gau transfer RNA isoleucine (anticodon GAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955500 8293826 8293897 + 101978795 AGCD01063986 MODEL 39131854 rrna 5S_rRNA 5S ribosomal RNA 39134374 misc_rna 7SK 7SK RNA 9048459 ncrna LOC102004900 uncharacterized LOC102004900 NW_004955458 14888316 14977389 - 102004900 AGCD01047854;AGCD01047855;AGCD01047856;AGCD01047857;AGCD01047858;GBDJ01147231;XR_001236480;XR_001236481;XR_262999;XR_263000 MODEL 8785512 protein-coding Bnip3l BCL2 interacting protein 3 like ENCODES a protein that exhibits identical protein binding (ortholog); lamin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); defense response to virus (ortholog); mitochondrial protein catabolic process (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Cerebral Hemorrhage (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955403 49122408 49144162 + 102027479 AGCD01002935;GBDF01047886;XM_005373726 XP_005373783 MODEL 8728131 protein-coding Aqp4 aquaporin 4 ENCODES a protein that exhibits identical protein binding (ortholog); water channel activity (ortholog); INVOLVED IN carbon dioxide transport (ortholog); cell-cell adhesion (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH Alpers-Huttenlocher syndrome (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN astrocyte end-foot (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955772 1160 10709 + 102007844 AGCD01078317;GBCB01001173;GBDJ01395917;XM_005415104 XP_005415161 MODEL 8952098 protein-coding Aacs acetoacetyl-CoA synthetase ENCODES a protein that exhibits acetoacetate-CoA ligase activity (ortholog); short-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to cholesterol (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN ketone bodies metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955482 4663818 4694170 - 102008532 AGCD01057301;AGCD01057302;AGCD01057303;AGCD01057304;GBBH01139945;GBDF01051990;XM_005403000 XP_005403057 MODEL 730469335 snorna ACEA_U3 ACEA small nucleolar RNA U3 39132047 rrna 5S_rRNA 5S ribosomal RNA 8843769 protein-coding Anks6 ankyrin repeat and sterile alpha motif domain containing 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); heart development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); Cardiovascular Abnormalities (ortholog); cervical cancer (ortholog); FOUND IN ciliary inversin compartment (ortholog); cytoplasm (ortholog) NW_004955419 26801924 26852116 + 102009506 AGCD01020416;AGCD01020417;GBCE01013135;GBDI01117462;XM_013513227 XP_013368681 MODEL 8738007 protein-coding LOC102008580 uncharacterized LOC102008580 NW_004955558 1650552 1710254 + 102008580 AGCD01073456;AGCD01073457;AGCD01073458;AGCD01073459;AGCD01073460;AGCD01073461;AGCD01073462;XM_013508849 XP_013364303 MODEL 8771338 pseudo LOC102005948 coiled-coil domain-containing protein 152-like NW_004955424 19596277 19597238 - 102005948 AGCD01024830 MODEL 8864331 protein-coding LOC102022414 membrane-spanning 4-domains subfamily A member 4A NW_004955511 5154898 5183422 + 102022414 AGCD01066549;GBDI01285041;XM_005408087;XM_005408088;XM_005408089;XM_013506507 XP_005408144;XP_005408145;XP_005408146;XP_013361961 MODEL 8775394 protein-coding Adamtsl1 ADAMTS like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955434 20929569 21392319 + 102023839 AGCD01032623;AGCD01032624;AGCD01032625;AGCD01032626;AGCD01032627;AGCD01032628;GBBH01066763;XM_005388721;XM_005388722 XP_005388778;XP_005388779 MODEL 8797716 protein-coding Lonrf3 LON peptidase N-terminal domain and ring finger 3 ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog) NW_004955534 979399 1016626 - 102014605 AGCD01070483;GBBH01086248;XM_005410453;XM_005410454;XM_005410455 XP_005410510;XP_005410511;XP_005410512 MODEL 8813485 ncrna LOC102011766 uncharacterized LOC102011766 NW_004955480 7767280 7832733 - 102011766 AGCD01056709;GBDI01142229;XR_001230909;XR_263746 MODEL 8889668 protein-coding Cldn6 claudin 6 ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN cell-cell junction organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog); plasma membrane (ortholog) NW_004955442 14323193 14326311 + 102008152 AGCD01037810;GBDF01217625;XM_005391379 XP_005391436 MODEL 39131392 protein-coding DMRT2 doublesex and mab-3 related transcription factor 2 9009879 protein-coding LOC102018323 melanoma-associated antigen B1-like NW_004955531 614018 615601 - 102018323 AGCD01070003;GBDF01126490;GBDF01126491;XM_005410132 XP_005410189 MODEL 8858527 pseudo LOC102008208 spermine synthase pseudogene NW_004955412 21750895 21751995 - 102008208 AGCD01013025 MODEL 8715969 protein-coding LOC102004144 palladin-like NW_004955408 32788476 32810588 + 102004144 AGCD01008854;AGCD01008855;GBDF01234212;XM_005376593 XP_005376650 MODEL 9037542 protein-coding LOC102010123 uncharacterized LOC102010123 NW_004955406 1259242 1295310 - 102010123 AGCD01005629;AGCD01005630;GBCQ01057585;XM_013503029 XP_013358483 MODEL 39134192 misc_rna 7SK 7SK RNA 8983894 protein-coding Cdkn2aip CDKN2A interacting protein ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of cell growth (ortholog); positive regulation of cell growth (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN granular component (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955403 25363170 25366481 - 102010014 AGCD01002287;GBDI01174579;XM_005373504 XP_005373561 MODEL 9012956 protein-coding Prkca protein kinase C alpha ENCODES a protein that exhibits calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to carbohydrate stimulus (ortholog); central nervous system neuron axonogenesis (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN alphav-beta3 integrin-PKCalpha complex (ortholog); apical part of cell (ortholog); axon (ortholog) NW_004955478 5686639 6090356 + 102026217 AGCD01055884;AGCD01055885;AGCD01055886;AGCD01055887;GBDF01178284;GBDF01178288;XM_013503220;XM_013503221 XP_013358674;XP_013358675 MODEL 8701115 protein-coding Soat2 sterol O-acyltransferase 2 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol O-acyltransferase activity (ortholog); fatty-acyl-CoA binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); cholesterol storage (ortholog); PARTICIPATES IN kidney failure pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955458 383123 394003 + 102012287 AGCD01047122;AGCD01047123;GBCQ01096818;XM_005397145;XM_005397147;XM_005397148;XM_005397150;XM_005397151;XM_013521027;XM_013521028 XP_005397202;XP_005397204;XP_005397205;XP_005397207;XP_005397208;XP_013376481;XP_013376482 MODEL 8850335 protein-coding Rcbtb1 RCC1 and BTB domain containing protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955431 2976283 3080665 - 102026031 AGCD01029944;AGCD01029945;AGCD01029946;GBDI01218100;XM_005387595;XM_005387596;XM_005387597;XM_013515750 XP_005387652;XP_005387653;XP_005387654;XP_013371204 MODEL 8808177 protein-coding LOC102012140 olfactory receptor 2G3-like NW_004955576 1369561 1370502 - 102012140 AGCD01075374;XM_005413955 XP_005414012 MODEL 8728334 ncrna LOC102010919 uncharacterized LOC102010919 NW_004955424 15047979 15112987 + 102010919 AGCD01024683;AGCD01024684;AGCD01024685;AGCD01024686;AGCD01024687;AGCD01024688;AGCD01024689;GBBH01137283;XR_001234214;XR_001234215;XR_001234216;XR_001234217;XR_001234218;XR_001234219;XR_001234220;XR_001234221;XR_001234222;XR_001234223 MODEL 8730101 ncrna LOC102007453 uncharacterized LOC102007453 NW_004955510 4663031 4720789 - 102007453 AGCD01066268;AGCD01066269;AGCD01066270;GBDF01122818;XR_001231663;XR_001231664;XR_264408 MODEL 9015681 pseudo LOC102009740 aldose reductase-related protein 2 pseudogene NW_004955428 145019 146060 + 102009740 AGCD01027566 MODEL 8926611 protein-coding LOC102008966 olfactory receptor 1030-like NW_004955511 1700555 1701493 - 102008966 AGCD01066377;XM_005407972 XP_005408029 MODEL 39134066 misc_rna 7SK 7SK RNA 9056865 protein-coding Cd63 CD63 molecule ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); endosome to melanosome transport (ortholog); ASSOCIATED WITH carotid artery disease (ortholog); colon adenocarcinoma (ortholog); diabetic neuropathy (ortholog); FOUND IN cell surface (ortholog); endosome lumen (ortholog); endosome membrane (ortholog) NW_004955458 3362511 3363916 - 102025765 AGCD01047296;GBCE01000424;XM_013520969 XP_013376423 MODEL 9016401 protein-coding Rrp8 ribosomal RNA processing 8 INVOLVED IN cellular response to glucose starvation (ortholog); energy homeostasis (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin silencing complex (ortholog); cytosol (ortholog); eNoSc complex (ortholog) NW_004955414 22311038 22316144 - 102028180 AGCD01015452;GBCE01188088;XM_005380167 XP_005380224 MODEL 8761451 protein-coding Atxn1l ataxin 1 like ENCODES a protein that exhibits POZ domain binding (ortholog); INVOLVED IN brain development (ortholog); extracellular matrix organization (ortholog); learning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); Spinocerebellar Ataxias (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955484 4546012 4557184 + 102014568 AGCD01058220;GBDF01010365;XM_005403518;XM_005403519 XP_005403575;XP_005403576 MODEL 8890532 protein-coding LOC102013346 carcinoembryonic antigen-related cell adhesion molecule 1-like NW_004955555 1051737 1061066 - 102013346 AGCD01073056;AGCD01073057;GBDJ01174557;XM_005412433 XP_005412490 MODEL 8939963 protein-coding Fhl2 four and a half LIM domains 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN atrial cardiac muscle cell development (ortholog); heart trabecula formation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955470 10240117 10286117 - 102028405 AGCD01052859;AGCD01052860;GBCQ01085852;XM_005400786;XM_005400787;XM_005400788;XM_013522764;XM_013522765 XP_005400843;XP_005400844;XP_005400845;XP_013378218;XP_013378219 MODEL 8718317 pseudo LOC102004518 microfibrillar-associated protein 1 pseudogene NW_004955437 7042525 7045014 + 102004518 AGCD01034448 MODEL 8717310 pseudo LOC102014069 high mobility group protein B3 pseudogene NW_004955505 5110525 5111126 + 102014069 AGCD01065145 MODEL 39134375 misc_rna 7SK 7SK RNA 9004348 protein-coding Cetn3 centrin 3 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); microtubule binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955418 21206387 21220984 + 102028416 AGCD01019265;AGCD01019266;GBDF01043246;XM_005382281 XP_005382338 MODEL 8967547 protein-coding Wdr36 WD repeat domain 36 INVOLVED IN regulation of axon extension (ortholog); retina homeostasis (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic asthma (ortholog); allergic rhinitis (ortholog); FOUND IN small-subunit processome (ortholog) NW_004955418 3988073 4023425 - 102017017 AGCD01018806;AGCD01018807;GBDK01006850;XM_005382167;XM_013513044 XP_005382224;XP_013368498 MODEL 8911469 protein-coding Plin2 perilipin 2 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); head and neck squamous cell carcinoma (ortholog); Hypertriglyceridemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955434 21573860 21580990 - 102018432 AGCD01032639;GBCB01119738;GBDJ01082348;XM_013516386 XP_013371840 MODEL 8911222 protein-coding C1ql1 complement C1q like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); motor learning (ortholog); neuron remodeling (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); climbing fiber (ortholog); cytoplasm (ortholog) NW_004955451 17729106 17734657 - 102008049 AGCD01043769;GBBH01106823;GBCQ01122993;XM_005394651 XP_005394708 MODEL 8703493 protein-coding Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 INVOLVED IN synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN clathrin coat of coated pit (ortholog); presynapse (ortholog) NW_004955524 1264035 1309394 + 102029784 AGCD01068741;AGCD01068742;GBCE01030448;XM_013507228;XM_013507229;XM_013507230;XM_013507231 XP_013362682;XP_013362683;XP_013362684;XP_013362685 MODEL 8991159 protein-coding Ankub1 ankyrin repeat and ubiquitin domain containing 1 ASSOCIATED WITH esophageal cancer (ortholog); ovarian cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955448 986177 1008175 - 102021817 AGCD01041246;GBDI01354197;XM_005393004;XM_013518681 XP_005393061;XP_013374135 MODEL 8790161 ncrna LOC102022416 uncharacterized LOC102022416 NW_004955431 15481204 15487817 + 102022416 AGCD01030361;GBDI01229445;XR_261478 MODEL 8860760 protein-coding LOC102011767 galectin-5-like NW_004955481 5476020 5485385 + 102011767 AGCD01056980;AGCD01056981;GBDF01261565;XM_005402778;XM_005402779 XP_005402835;XP_005402836 MODEL 8762758 pseudo LOC102007056 protein CDV3 pseudogene NW_004955437 733515 734520 - 102007056 AGCD01034158 MODEL 9026452 protein-coding Dmrt2 doublesex and mab-3 related transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN embryonic skeletal system development (ortholog); positive regulation of myotome development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); amenorrhea (ortholog); Dwarfism (ortholog); FOUND IN nucleus (ortholog) NW_004955434 5528625 5535783 + 102008765 AGCD01032192;AGCD01032193;GBCE01077894;GBDF01176827;XM_013516376 XP_013371830 MODEL 8835135 protein-coding Atf4 activating transcription factor 4 ENCODES a protein that exhibits cAMP response element binding (ortholog); cAMP response element binding protein binding (ortholog); DNA binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH borna disease (ortholog); Hypoxia (ortholog); invasive ductal carcinoma (ortholog); FOUND IN ATF1-ATF4 transcription factor complex (ortholog); ATF4-CREB1 transcription factor complex (ortholog); centrosome (ortholog) NW_004955413 25406589 25408727 + 102004467 AGCD01014405;GBDJ01240104;XM_005379299 XP_005379356 MODEL 8979015 protein-coding Il1r1 interleukin 1 receptor type 1 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); heat acclimation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); aortic dissection (ortholog); Bacterial Keratitis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955470 7685498 7703374 + 102029851 AGCD01052803;GBDJ01419739;XM_005400837 XP_005400894 MODEL 9059073 trna Trnai-uau transfer RNA isoleucine (anticodon UAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955468;NW_004955465;NW_004955441;NW_004955483 149799;13289424;10151035;194221 149891;13289517;10151126;194314 +;+;+;- 101978796 AGCD01037076;AGCD01050597;AGCD01051684;AGCD01057602 MODEL 8782041 ncrna LOC102008209 uncharacterized LOC102008209 NW_004955467 9932033 9948996 + 102008209 AGCD01051536;AGCD01051537;GBBH01110880;XR_001236856 MODEL 8724541 protein-coding LOC102004145 cryptic protein-like NW_004955459 153874 177414 + 102004145 AGCD01047925;AGCD01047926;GBDF01016700;XM_013521086;XM_013521087;XM_013521088;XM_013521089 XP_013376540;XP_013376541;XP_013376542;XP_013376543 MODEL 9039936 protein-coding LOC102018324 chromosome unknown open reading frame, human C6orf47 ASSOCIATED WITH hereditary spastic paraplegia 86 (ortholog) NW_004955437 192873 195159 - 102018324 AGCD01034108;GBCB01075013;XM_005389347 XP_005389404 MODEL 8940012 protein-coding LOC102003103 uncharacterized LOC102003103 NW_004955412 1132411 1136987 + 102003103 AGCD01012507;GBDF01116497;XM_005377954 XP_005378011 MODEL 8771674 protein-coding LOC102004902 uncharacterized LOC102004902 NW_004955458 6755891 6789102 + 102004902 AGCD01047568;GBDI01288371;XM_005397527 XP_005397584 MODEL 8825671 protein-coding Aqp5 aquaporin 5 ENCODES a protein that exhibits identical protein binding (ortholog); water channel activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); carbon dioxide transport (ortholog); cellular hypotonic response (ortholog); PARTICIPATES IN E-cadherin signaling pathway; water transport pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Bothnian type palmoplantar keratoderma (ortholog); brain ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955547 558296 562455 + 102010096 AGCD01072162;AGCD01072163;GBBH01004211;XM_005411857 XP_005411914 MODEL 9012459 protein-coding Bnip5 BCL2 interacting protein 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); prostate cancer (ortholog) NW_004955437 4049113 4067150 - 102009216 AGCD01034359;GBCQ01139589;XM_005389589;XM_005389590;XM_005389591 XP_005389646;XP_005389647;XP_005389648 MODEL 8998473 protein-coding Atxn2 ataxin 2 ENCODES a protein that exhibits DNA binding domain binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN cerebellar Purkinje cell differentiation (ortholog); cytoplasmic stress granule assembly (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); Golgi apparatus (ortholog) NW_004955482 8101410 8187815 - 102028635 AGCD01057503;AGCD01057504;AGCD01057505;AGCD01057506;AGCD01057507;AGCD01057508;AGCD01057509;AGCD01057510;GBDI01131383;XM_013503648 XP_013359102 MODEL 8758048 protein-coding Aadacl2 arylacetamide deacetylase like 2 NW_004955448 2793842 2823083 + 102004868 AGCD01041290;GBCC01015414;XM_013518580 XP_013374034 MODEL 8992061 protein-coding Sobp sine oculis binding protein homolog ENCODES a protein that exhibits SUMO polymer binding (ortholog); INVOLVED IN cochlea development (ortholog); cognition (ortholog); inner ear morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); Impaired intellectual development, anterior maxillary protrusion, and strabismus (ortholog); FOUND IN nucleus (ortholog) NW_004955411 32745029 32898570 + 102023568 AGCD01012336;AGCD01012337;AGCD01012338;AGCD01012339;GBCB01000312;XM_013510791 XP_013366245 MODEL 8758313 protein-coding Prkcb protein kinase C beta ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); chromatin binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell receptor signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN insulin signaling pathway; interleukin-2 signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); FOUND IN brush border membrane (ortholog); calyx of Held (ortholog); centrosome (ortholog) NW_004955493 2395494 2710522 + 102015323 AGCD01060951;AGCD01060952;AGCD01060953;AGCD01060954;AGCD01060955;AGCD01060956;AGCD01060957;AGCD01060958;AGCD01060959;AGCD01060960;AGCD01060961;GBDI01025873;XM_005405341 XP_005405398 MODEL 8799856 pseudo LOC102008582 adiponectin receptor protein 1 pseudogene NW_004955446 6108606 6109553 - 102008582 AGCD01040087 MODEL 39132048 rrna 5S_rRNA 5S ribosomal RNA 8819643 protein-coding LOC102013703 glutathione S-transferase A4-like NW_004955411 3077380 3086049 + 102013703 AGCD01011534;AGCD01011535;GBCB01100401;XM_013510713 XP_013366167 MODEL 8933107 protein-coding LOC102005950 cytochrome P450 2C55 NW_004955507 1146694 1227783 + 102005950 AGCD01065516;AGCD01065517;AGCD01065518;AGCD01065519;AGCD01065520;AGCD01065521;AGCD01065522;AGCD01065523;AGCD01065524;AGCD01065525;AGCD01065526;GBDI01308871;XM_005407534;XM_013506231 XP_005407591;XP_013361685 MODEL 8892606 protein-coding Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN epidermis development (ortholog); phosphatidic acid biosynthetic process (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH cervical cancer (ortholog); congenital generalized lipodystrophy (ortholog); congenital generalized lipodystrophy type 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955513 4142074 4145097 + 102025828 AGCD01066922;GBDF01003324;GBDK01007887;XM_013506701 XP_013362155 MODEL 8895379 protein-coding Alox15 arachidonate 15-lipoxygenase ENCODES a protein that exhibits arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 15-lipoxygenase activity (ortholog); hepoxilin-epoxide hydrolase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); arachidonate metabolic process (ortholog); bone mineralization (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955467 10032792 10039789 - 102009820 AGCD01051543;GBDJ01148490;XM_005399581;XM_013522022 XP_005399638;XP_013377476 MODEL 9008420 protein-coding Slc35f4 solute carrier family 35 member F4 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); sarcoma (ortholog) NW_004955466 11436970 11465593 - 102028516 AGCD01051093;AGCD01051094;GBDF01105346;XM_013521882 XP_013377336 MODEL 9023689 protein-coding Adamtsl2 ADAMTS like 2 ENCODES a protein that exhibits microfibril binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); lobar bronchus epithelium development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH acromicric dysplasia (ortholog); aortic aneurysm (ortholog); Congenital Hand Deformities (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955513 2849310 2879130 + 102019833 AGCD01066891;GBCE01022223;XM_013506730;XM_013506731;XM_013506732;XM_013506733 XP_013362184;XP_013362185;XP_013362186;XP_013362187 MODEL 8919204 protein-coding Cldn7 claudin 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); COVID-19 (ortholog); Neoplasm Metastasis (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955467 9652093 9654291 + 102023456 AGCD01051520;GBDJ01078868;XM_005399528 XP_005399585 MODEL 8872090 protein-coding LOC102008968 olfactory receptor-like protein OLF2 NW_004955511 826804 827742 + 102008968 AGCD01066344;XM_005408212 XP_005408269 MODEL 8848985 ncrna LOC102010124 uncharacterized LOC102010124 NW_004955406 8915324 8930814 + 102010124 AGCD01005810;GBDF01157210;XR_259486 MODEL 39131855 rrna 5S_rRNA 5S ribosomal RNA 8724154 ncrna LOC102022417 uncharacterized LOC102022417 NW_004955432 705758 726019 - 102022417 AGCD01030574;GBCE01049655;XR_261497 MODEL 9055344 protein-coding Rrp9 ribosomal RNA processing 9, U3 small nucleolar RNA binding protein ENCODES a protein that exhibits U3 snoRNA binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Disease Progression (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); nucleolus (ortholog); small-subunit processome (ortholog) NW_004955532 3584111 3591234 - 102022852 AGCD01070288;GBDJ01136397;XM_005410332 XP_005410389 MODEL 8928427 protein-coding LOC102004531 uncharacterized LOC102004531 NW_004955447 9636461 9712154 + 102004531 AGCD01040865;AGCD01040866;XM_005392954 XP_005393011 MODEL 8841570 protein-coding Acer1 alkaline ceramidase 1 ENCODES a protein that exhibits N-acylsphingosine amidohydrolase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to calcium ion (ortholog); ceramide catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955495 3247170 3271417 + 102015861 AGCD01061843;AGCD01061844;GBCC01007225;XM_005405727 XP_005405784 MODEL 9024969 ncrna LOC102014071 uncharacterized LOC102014071 NW_004955506 4721256 4728012 - 102014071 AGCD01065342;GBDF01221712;XR_001231588;XR_264354 MODEL 8766865 protein-coding Cbx1 chromobox 1 ENCODES a protein that exhibits enzyme binding (ortholog); histone H1K26me1 reader activity (ortholog); histone H1K26me2 reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Neurodevelopmental Disorders (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome, centromeric region (ortholog) NW_004955451 13066628 13083693 + 102009450 AGCD01043445;AGCD01043446;GBDF01128155;XM_005394249 XP_005394306 MODEL 8815650 pseudo LOC102007454 60 kDa heat shock protein, mitochondrial pseudogene NW_004955429 3122832 3124566 - 102007454 AGCD01028458 MODEL 8763593 ncrna LOC102009741 uncharacterized LOC102009741 NW_004955509 2061123 2079468 + 102009741 AGCD01065988;XR_001231659;XR_264399 MODEL 9050685 protein-coding Wdr37 WD repeat domain 37 INVOLVED IN corpus callosum development (ortholog); lymphocyte homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar hypoplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955421 30097046 30161762 - 102023043 AGCD01022380;AGCD01022381;AGCD01022382;GBDF01221568;XM_005383910;XM_013513754;XM_013513755;XM_013513756;XM_013513758;XM_013513759 XP_005383967;XP_013369208;XP_013369209;XP_013369210;XP_013369212;XP_013369213 MODEL 39134193 misc_rna 7SK 7SK RNA 8731185 protein-coding Sftpb surfactant protein B INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955424 1849313 1858087 + 102025136 AGCD01024248;GBDK01014342;XM_005385414;XM_005385415;XM_005385416;XM_005385417 XP_005385471;XP_005385472;XP_005385473;XP_005385474 MODEL 9000691 protein-coding Cdkn2b cyclin dependent kinase inhibitor 2B ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to cell-matrix adhesion (ortholog); cellular response to nutrient (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955472 12275613 12280141 + 102004697 AGCD01053789;GBDF01020019;XM_005401165 XP_005401222 MODEL 8779886 protein-coding Dmrt3 doublesex and mab-3 related transcription factor 3 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult walking behavior (ortholog); male sex differentiation (ortholog); regulation of odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955434 5455449 5470343 + 102008450 AGCD01032190;GBBH01113534;XM_013516294 XP_013371748 MODEL 9032521 protein-coding Il1r2 interleukin 1 receptor type 2 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of interleukin-1 alpha production (ortholog); negative regulation of interleukin-1-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aggressive periodontitis (ortholog); allergic disease (ortholog); FOUND IN cytoplasm (ortholog); interleukin-1 receptor complex (ortholog) NW_004955470 7518565 7562219 + 102018381 AGCD01052798;AGCD01052799;AGCD01052800;GBBH01144026;XM_005400763;XM_005400764;XM_005400766;XM_013522801;XM_013522802;XM_013522803;XR_001237023 XP_005400820;XP_005400821;XP_005400823;XP_013378255;XP_013378256;XP_013378257 MODEL 39134376 misc_rna 7SK 7SK RNA 9013323 ncrna LOC102010922 uncharacterized LOC102010922 NW_004955425 2114106 2208490 - 102010922 AGCD01025251;AGCD01025252;AGCD01025253;AGCD01025254;AGCD01025255;GBDF01075868;XR_001234279;XR_001234280;XR_001234281;XR_001234282;XR_001234283 MODEL 8792751 protein-coding C1ql2 complement C1q like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); postsynaptic density assembly (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955459 10569064 10571064 + 102024767 AGCD01048192;GBDK01160507;XM_013521053 XP_013376507 MODEL 8885269 protein-coding Socs1 suppressor of cytokine signaling 1 ENCODES a protein that exhibits insulin-like growth factor receptor binding (ortholog); kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN insulin signaling pathway; interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955442 7321337 7323109 + 102030005 AGCD01037623;GBCE01077934;XM_005391166 XP_005391223 MODEL 8786859 protein-coding Plin3 perilipin 3 ENCODES a protein that exhibits diacylglycerol binding (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); lipid droplet (ortholog) NW_004955495 4177701 4190052 + 102003035 AGCD01061900;AGCD01061901;GBDF01047898;XM_005405777;XM_013505193;XM_013505194 XP_005405834;XP_013360647;XP_013360648 MODEL 8833527 protein-coding Eps8 EGFR pathway substrate 8, signaling adaptor ENCODES a protein that exhibits actin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 102 (ortholog); autosomal recessive nonsyndromic deafness 106 (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); glutamatergic synapse (ortholog) NW_004955413 12267701 12386088 - 102005356 AGCD01013986;AGCD01013987;AGCD01013988;GBDI01290198;XM_005379018;XM_005379019;XM_005379020 XP_005379075;XP_005379076;XP_005379077 MODEL 8952842 protein-coding Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 ENCODES a protein that exhibits catalytic activity, acting on a tRNA (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955453 14196728 14204344 - 102015801 AGCD01044859;GBBH01140731;XM_005395563;XM_005395566;XM_005395567;XM_013519851 XP_005395620;XP_005395623;XP_005395624;XP_013375305 MODEL 8780663 ncrna LOC102005951 uncharacterized LOC102005951 NW_004955429 3029946 3056828 + 102005951 AGCD01028449;AGCD01028450;AGCD01028451;AGCD01028452;AGCD01028453;AGCD01028454;GBDF01054382;XR_261312 MODEL 8765011 pseudo LOC102011771 glucose-induced degradation protein 8 homolog pseudogene NW_004955419 29922246 29923728 - 102011771 AGCD01020515 MODEL 9065816 protein-coding Slc35f5 solute carrier family 35 member F5 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955459 15407686 15440536 + 102030285 AGCD01048322;GBBH01117606;GBCC01033256;XM_013521078 XP_013376532 MODEL 8824129 pseudo LOC102013349 small nuclear ribonucleoprotein E pseudogene NW_004955442 15952452 15954108 + 102013349 AGCD01037888;AGCD01037889 MODEL 8878585 protein-coding Loricrin loricrin cornified envelope precursor protein ENCODES a protein that exhibits structural constituent of cytoskeleton (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN keratinocyte differentiation (ortholog); ASSOCIATED WITH Skin Neoplasms (ortholog); squamous cell carcinoma (ortholog); Vohwinkel Syndrome, Variant Form (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955592 167139 169638 - 102007834 AGCD01076300;GBCC01001286;XM_005414606 XP_005414663 MODEL 9065919 ncrna LOC102010129 uncharacterized LOC102010129 NW_004955457 12742119 12748992 + 102010129 AGCD01047026;GBCB01083718;XR_262945 MODEL 39131857 rrna 5S_rRNA 5S ribosomal RNA 9030663 protein-coding Cwh43 cell wall biogenesis 43 C-terminal homolog INVOLVED IN brain development (ortholog); cell adhesion (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955447 18683173 18733546 - 102020393 AGCD01041183;AGCD01041184;GBDJ01334628;XM_005392926 XP_005392983 MODEL 8959626 protein-coding Atf5 activating transcription factor 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cerebellar granule cell precursor proliferation (ortholog); circadian rhythm (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); Huntington's disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955559 1008208 1013023 - 102027351 AGCD01073626;GBDJ01277413;XM_005412814 XP_005412871 MODEL 8755864 protein-coding Adamtsl3 ADAMTS like 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955416 12818153 13132960 - 102027299 AGCD01017213;AGCD01017214;AGCD01017215;AGCD01017216;AGCD01017217;AGCD01017218;GBDJ01194632;XM_005381454;XM_013512535;XM_013512536;XM_013512537 XP_005381511;XP_013367989;XP_013367990;XP_013367991 MODEL 8766864 pseudo LOC102008213 RWD domain-containing protein 1 pseudogene NW_004955472 2276716 2278452 - 102008213 AGCD01053451 MODEL 8833974 pseudo LOC102018329 plakophilin-4 pseudogene NW_004955537 2756117 2758521 - 102018329 AGCD01070938 MODEL 8889880 protein-coding Rcbtb2 RCC1 and BTB domain containing protein 2 INVOLVED IN cell population proliferation (ortholog); digestive tract development (ortholog); liver development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955431 2122640 2170222 - 102016407 AGCD01029923;GBCB01040884;XM_005387558;XM_005387559;XM_005387562;XM_005387564;XM_005387565;XM_005387567;XM_013515735;XM_013515736;XM_013515737;XM_013515738;XM_013515739;XM_013515740;XM_013515741;XM_013515742 XP_005387615;XP_005387616;XP_005387619;XP_005387621;XP_005387622;XP_005387624;XP_013371189;XP_013371190;XP_013371191;XP_013371192;XP_013371193;XP_013371194;XP_013371195;XP_013371196 MODEL 8985272 protein-coding LOC102003104 uncharacterized LOC102003104 NW_004955412 13999049 14010479 - 102003104 AGCD01012849;AGCD01012850;GBCB01025463;XM_013510960;XM_013510961;XM_013510962;XM_013510963;XM_013510964;XM_013510965;XM_013510966;XR_001232853;XR_001232854 XP_013366414;XP_013366415;XP_013366416;XP_013366417;XP_013366418;XP_013366419;XP_013366420 MODEL 8820578 protein-coding Cfap100 cilia and flagella associated protein 100 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN chromosome segregation (ortholog); keratinocyte proliferation (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN ciliary basal body (ortholog); microtubule (ortholog); spindle pole (ortholog) NW_004955421 21652655 21685866 + 102019606 AGCD01022114;AGCD01022115;GBDF01187394;XM_005383833 XP_005383890 MODEL 8716542 ncrna LOC102004903 uncharacterized LOC102004903 NW_004955409 9055420 9070182 + 102004903 AGCD01009428;AGCD01009429;AGCD01009430;GBDF01194507;XR_259760 MODEL 39134067 misc_rna 7SK 7SK RNA 8964952 protein-coding Aadacl3 arylacetamide deacetylase like 3 NW_004955486 577468 586176 - 102019602 AGCD01058861;GBDF01183065;XM_005403938 XP_005403995 MODEL 8823246 protein-coding Aqp6 aquaporin 6 ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); monoatomic anion channel activity (ortholog); INVOLVED IN nitrate transmembrane transport (ortholog); odontogenesis (ortholog); renal water transport (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) NW_004955547 567152 570880 + 102010415 AGCD01072164;GBDK01181608;XM_005411858 XP_005411915 MODEL 39134377 misc_rna 7SK 7SK RNA 9064688 protein-coding Atxn2l ataxin 2 like INVOLVED IN mRNA metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955493 6626106 6637678 - 102017248 AGCD01061122;GBCQ01042325;GBDI01008267;XM_013504810;XM_013504811;XM_013504812;XM_013504813;XR_001231274 XP_013360264;XP_013360265;XP_013360266;XP_013360267 MODEL 9052849 ncrna LOC102013707 uncharacterized LOC102013707 NW_004955465 9394348 9420768 + 102013707 AGCD01050492;GBDF01054810;XR_263261 MODEL 8811337 protein-coding LOC102014076 olfactory receptor 5D18-like NW_004955511 4975490 4976440 + 102014076 AGCD01066541;XM_005408280 XP_005408337 MODEL 9033515 protein-coding Prkcd protein kinase C delta ENCODES a protein that exhibits calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN apoptotic process (ortholog); B cell proliferation (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN ceramide signaling pathway; eicosanoid signaling pathway; endothelin signaling pathway; ASSOCIATED WITH autoimmune lymphoproliferative syndrome type 3 (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955430 3125066 3151857 + 102029544 AGCD01029192;AGCD01029193;GBDI01068073;XM_005387365;XM_013515681;XM_013515682 XP_005387422;XP_013371135;XP_013371136 MODEL 39132050 rrna 5S_rRNA 5S ribosomal RNA 8712674 protein-coding LOC102012144 cytochrome b5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN response to cadmium ion (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 57701931 57739163 - 102012144 AGCD01001508;AGCD01001509;GBDK01022341;XM_005373076 XP_005373133 MODEL 8965241 protein-coding Cd68 CD68 molecule INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to nutrient levels (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN lysosome (ortholog); plasma membrane (ortholog) NW_004955467 9340490 9343912 - 102009164 AGCD01051497;GBDJ01000965;XM_005399476 XP_005399533 MODEL 8759530 protein-coding Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) NW_004955407 41365920 41434090 - 102030154 AGCD01007865;GBCE01117797;GBDF01005441;XM_005375876 XP_005375933 MODEL 9031080 protein-coding Wdr4 WDR4 tRNA N7-guanosine methyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN tRNA (guanine-N7)-methylation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 39044328 39066277 + 102008697 AGCD01007821;GBCB01087848;XM_005375807;XM_005375808 XP_005375864;XP_005375865 MODEL 8940122 protein-coding LOC102008972 uncharacterized LOC102008972 NW_004955515 4155520 4227819 - 102008972 AGCD01067316;AGCD01067317;GBCE01099088;XM_013506861 XP_013362315 MODEL 8709743 trna Trnak-cuu transfer RNA lysine (anticodon CUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978827 AGCD01037806;AGCD01051106;AGCD01057606;AGCD01069830;AGCD01074502 MODEL 8752739 protein-coding Cldn8 claudin 8 ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955407 29563982 29568728 - 102028719 AGCD01007610;GBCQ01002773;XM_005375624;XM_013504074 XP_005375681;XP_013359528 MODEL 10131559 protein-coding Plin4 perilipin 4 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Coffin-Siris syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955495 4417672 4426945 + 106146790 AGCD01061922;GBDK01147195;XM_013505186;XM_013505187 XP_013360640;XP_013360641 MODEL 9007676 ncrna LOC102005952 uncharacterized LOC102005952 NW_004955429 17092345 17096969 - 102005952 AGCD01028845;GBCQ01165026;XR_001234501;XR_001234502;XR_001234503;XR_261348 MODEL 8732023 ncrna LOC102004146 uncharacterized LOC102004146 NW_004955460 10717060 10718321 - 102004146 AGCD01048602;GBDI01208841;XR_263051 MODEL 8778983 protein-coding Anln anillin actin binding protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); mitotic cytokinesis (ortholog); podocyte cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actomyosin contractile ring (ortholog); bleb (ortholog) NW_004955460 6972077 7033900 - 102003627 AGCD01048477;AGCD01048478;GBDF01156973;XM_005397763;XM_005397764;XM_005397767 XP_005397820;XP_005397821;XP_005397824 MODEL 9026073 ncrna LOC102004534 uncharacterized LOC102004534 NW_004955402 4403382 4407335 + 102004534 AGCD01000122;GBCQ01155602;XR_259024;XR_259025 MODEL 8926409 protein-coding Bnipl BCL2 interacting protein like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); negative regulation of cell population proliferation (ortholog); regulation of growth rate (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955588 409509 417825 + 102021295 AGCD01076109;GBCC01012774;XM_005414480;XM_005414481;XM_005414482;XR_001232525 XP_005414537;XP_005414538;XP_005414539 MODEL 10197077 protein-coding Rrs1 regulator of ribosome synthesis 1 ENCODES a protein that exhibits 5S rRNA binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); mitotic metaphase chromosome alignment (ortholog); protein localization to nucleolus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN condensed nuclear chromosome (ortholog); endoplasmic reticulum (ortholog); nucleolus (ortholog) NW_004955444 12740172 12751674 - 106146256 AGCD01039081;GBDI01119105;XM_013518191;XM_013518192;XM_013518193;XR_262264 XP_013373645;XP_013373646;XP_013373647 MODEL 8816133 protein-coding Acer2 alkaline ceramidase 2 ENCODES a protein that exhibits N-acylsphingosine amidohydrolase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); ceramide catabolic process (ortholog); DNA damage response (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955434 21786857 21810648 + 102027892 AGCD01032655;AGCD01032656;GBCE01104129;GBDF01113399;XM_005388734 XP_005388791 MODEL 8835262 ncrna LOC102007455 uncharacterized LOC102007455 NW_004955512 5582577 5590157 - 102007455 AGCD01066771;GBDF01177427;XR_264450 MODEL 39134200 misc_rna 7SK 7SK RNA 8711058 ncrna LOC102007057 uncharacterized LOC102007057 NW_004955439 18083547 18090067 + 102007057 AGCD01036049;GBDK01269094;XR_001235223;XR_001235224 MODEL 8959994 pseudo LOC102014078 chromobox protein homolog 3 pseudogene NW_004955433 15960858 15962895 - 102014078 AGCD01031778 MODEL 9022110 protein-coding Fhl3 four and a half LIM domains 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); stress fiber (ortholog) NW_004955452 15718832 15721697 - 102016662 AGCD01044495;GBDF01276712;GBDK01320683;XM_013519692 XP_013375146 MODEL 8927919 protein-coding Eps8l1 EPS8 signaling adaptor L1 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); T cell receptor binding (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ruffle membrane (ortholog) NW_004955567 1074714 1084259 - 102006837 AGCD01074458;AGCD01074459;GBCE01000821;XM_013509255;XM_013509256;XM_013509257;XM_013509258 XP_013364709;XP_013364710;XP_013364711;XP_013364712 MODEL 8700555 protein-coding LOC102012146 3-alpha-hydroxysteroid sulfotransferase-like NW_004955609 372015 408109 - 102012146 AGCD01077059;AGCD01077060;GBDI01156067;XM_005414932 XP_005414989 MODEL 730468946 misc_rna CDKN2B-AS CDKN2B antisense RNA 1 intronic convserved region 8828043 protein-coding Agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN phospholipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955439 20050619 20132893 + 102009991 AGCD01036103;AGCD01036104;AGCD01036105;AGCD01036106;GBCQ01063027;GBDK01230032;XM_013517398 XP_013372852 MODEL 8779085 protein-coding Lox lysyl oxidase ENCODES a protein that exhibits collagen binding (ortholog); copper ion binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN aorta development (ortholog); ascending aorta development (ortholog); blood vessel development (ortholog); PARTICIPATES IN hypertension pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); aortic aneurysm (ortholog); aortic valve insufficiency (ortholog); FOUND IN collagen trimer (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955521 178290 193926 - 102005958 AGCD01068130;GBCE01000865;GBDK01279501;XM_005409287;XM_013507090 XP_005409344;XP_013362544 MODEL 8952952 protein-coding Dmrta1 DMRT like family A1 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male mating behavior (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955472 11923796 11925127 - 102020002 AGCD01053777;GBDI01136394;XM_013523045 XP_013378499 MODEL 8956128 protein-coding Cbx2 chromobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN development of primary sexual characteristics (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,XY sex reversal 5 (ortholog); disorder of sexual development (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); heterochromatin (ortholog) NW_004955506 3045395 3053003 - 102024485 AGCD01065307;GBCE01130199;GBDK01415620;XM_013506142 XP_013361596 MODEL 8799639 protein-coding LOC102003108 H/ACA ribonucleoprotein complex subunit 1-like NW_004955413 7012350 7019221 - 102003108 AGCD01013789;GBDI01034364;XM_005378922;XM_005378923 XP_005378979;XP_005378980 MODEL 8897145 pseudo LOC102009743 tubulin alpha-3E chain pseudogene NW_004955429 3059738 3060342 - 102009743 AGCD01028454 MODEL 8839057 protein-coding Rcc1 regulator of chromosome condensation 1 ENCODES a protein that exhibits chromatin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); histone binding (ortholog); INVOLVED IN chromosome segregation (ortholog); G1/S transition of mitotic cell cycle (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); brain disease (ortholog); Familial Prostate Cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955452 7612784 7643275 + 102017089 AGCD01044178;AGCD01044179;GBDF01004865;XM_005394955;XM_005394956;XM_013519490 XP_005395012;XP_005395013;XP_013374944 MODEL 39134068 misc_rna 7SK 7SK RNA 9058926 protein-coding Alox15b arachidonate 15-lipoxygenase type B ENCODES a protein that exhibits arachidonate 15-lipoxygenase activity (ortholog); arachidonate 8(S)-lipoxygenase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); endocannabinoid signaling pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955467 8896740 8906032 - 102025779 AGCD01051477;GBDJ01402897;XM_005399438 XP_005399495 MODEL 39134194 misc_rna 7SK 7SK RNA 8963835 protein-coding C1ql3 complement C1q like 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); postsynaptic density assembly (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955429 11287486 11296716 + 102030103 AGCD01028686;GBDJ01404596;XM_005386970 XP_005387027 MODEL 8967050 protein-coding Atxn3 ataxin 3 ENCODES a protein that exhibits ATPase binding (ortholog); cysteine-type deubiquitinase activity (ortholog); histone deacetylase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to amino acid starvation (ortholog); cellular response to heat (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cataplexy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955438 14405415 14443457 - 102024385 AGCD01035345;AGCD01035346;GBBH01096128;XM_005390322;XM_013517193;XM_013517194;XM_013517196;XM_013517197;XM_013517198;XR_001235139;XR_261931 XP_005390379;XP_013372647;XP_013372648;XP_013372650;XP_013372651;XP_013372652 MODEL 8782097 ncrna LOC102011776 uncharacterized LOC102011776 NW_004955421 24690889 24718021 + 102011776 AGCD01022221;GBDF01281561;XR_260824 MODEL 8702184 protein-coding Sftpc surfactant protein C ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955403 45649149 45651421 + 102004547 AGCD01002825;GBDK01013470;XM_005373651;XM_005373652 XP_005373708;XP_005373709 MODEL 8730163 pseudo LOC102010130 olfactory receptor 1361-like NW_004955408 1554851 1556907 + 102010130 AGCD01007965 MODEL 8825967 protein-coding Slc35f6 solute carrier family 35 member F6 INVOLVED IN negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog); mitochondrion (ortholog) NW_004955469 8774225 8787549 + 102015500 AGCD01052481;AGCD01052482;GBDF01281490;XM_005400439 XP_005400496 MODEL 9067308 pseudo LOC102004151 olfactory receptor 150-like NW_004955412 24990393 24991336 + 102004151 AGCD01013133 MODEL 8718124 protein-coding Cx3cl1 C-X3-C motif chemokine ligand 1 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CX3C chemokine receptor binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); autocrine signaling (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); allergic disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) NW_004955433 15023272 15034650 + 102025717 AGCD01031744;AGCD01031745;GBBH01091020;XM_005388386;XM_005388387 XP_005388443;XP_005388444 MODEL 8788622 protein-coding LOC102018332 uncharacterized LOC102018332 NW_004955437 7937031 7944587 - 102018332 AGCD01034476;GBCB01119722;XM_013516734 XP_013372188 MODEL 9055652 pseudo LOC102010929 transcriptional repressor protein YY1-like NW_004955429 4787838 4789119 - 102010929 AGCD01028496 MODEL 8996407 protein-coding Adamtsl4 ADAMTS like 4 ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN epithelial cell development (ortholog); extracellular matrix organization (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH autosomal recessive isolated ectopia lentis 2 (ortholog); Craniosynostosis with Ectopia Lentis (ortholog); ectopia lentis with ectopia of pupil (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) NW_004955413 258078 269324 - 102010983 AGCD01013454;AGCD01013455;GBCQ01066864;GBDI01082370;XM_005378671;XM_013511417 XP_005378728;XP_013366871 MODEL 8918547 protein-coding Ano1 anoctamin 1 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to peptide (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog); glutamatergic synapse (ortholog) NW_004955422 16064526 16213614 - 102021678 AGCD01022891;AGCD01022892;GBDK01414131;XM_005384239;XM_005384240;XM_005384241;XM_005384242;XM_005384243;XM_005384244;XM_005384246;XM_005384247;XM_013514309;XM_013514310 XP_005384296;XP_005384297;XP_005384298;XP_005384299;XP_005384300;XP_005384301;XP_005384303;XP_005384304;XP_013369763;XP_013369764 MODEL 8820722 protein-coding Aagab alpha and gamma adaptin binding protein ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955450 8694829 8742816 + 102025069 AGCD01042575;AGCD01042576;GBCQ01094289;XM_005393690 XP_005393747 MODEL 9057865 protein-coding Aqp7 aquaporin 7 ENCODES a protein that exhibits glycerol channel activity (ortholog); urea channel activity (ortholog); urea transmembrane transporter activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); renal water absorption (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH cervical cancer (ortholog); colitis (ortholog); colon adenocarcinoma (ortholog); FOUND IN brush border membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955472 2283426 2297251 + 102008526 AGCD01053451;AGCD01053452;AGCD01053453;GBDI01353209;XM_005401099;XM_005401100;XM_005401101;XM_005401102;XM_005401103;XM_013522949;XM_013522950 XP_005401156;XP_005401157;XP_005401158;XP_005401159;XP_005401160;XP_013378403;XP_013378404 MODEL 39131304 protein-coding RS1 retinoschisin 1 8890896 protein-coding LOC102022422 trace amine-associated receptor 8b-like NW_004955436 13126382 13132776 - 102022422 AGCD01033854;XM_013516594 XP_013372048 MODEL 39132052 rrna 5S_rRNA 5S ribosomal RNA 8901407 protein-coding Prkce protein kinase C epsilon ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); actin monomer binding (ortholog); calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955441 12642703 13142396 + 102010309 AGCD01037132;AGCD01037133;AGCD01037134;AGCD01037135;AGCD01037136;AGCD01037137;AGCD01037138;AGCD01037139;AGCD01037140;AGCD01037141;AGCD01037142;GBDI01034881;XM_005390971;XM_013517553;XM_013517554 XP_005391028;XP_013373007;XP_013373008 MODEL 39134201 misc_rna 7SK 7SK RNA 9060172 protein-coding LOC102013350 kallikrein-4-like NW_004955559 2994 9200 + 102013350 AGCD01073532;XM_013508937 XP_013364391 MODEL 9000083 pseudo LOC102008973 translationally-controlled tumor protein pseudogene NW_004955516 2157659 2158275 + 102008973 AGCD01067449 MODEL 8825298 trna Trnak-uuu transfer RNA lysine (anticodon UUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978826 AGCD01006660;AGCD01022734;AGCD01040255;AGCD01042735;AGCD01050592;AGCD01050596;AGCD01050635;AGCD01051475;AGCD01054570;AGCD01066489;AGCD01066490 MODEL 8797575 protein-coding Cldn9 claudin 9 ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN cell-cell junction organization (ortholog); tight junction organization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 116 (ortholog); Hearing Loss (ortholog); nonsyndromic deafness (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); plasma membrane (ortholog) NW_004955442 14326705 14328150 - 102008464 AGCD01037810;GBBH01034314;XM_005391380 XP_005391437 MODEL 8925307 protein-coding Aqp8 aquaporin 8 ENCODES a protein that exhibits ammonium channel activity (ortholog); methylammonium channel activity (ortholog); urea channel activity (ortholog); INVOLVED IN ammonium import across plasma membrane (ortholog); ammonium transmembrane transport (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH brain ischemia (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955493 3550697 3558875 + 102003458 AGCD01061001;GBDF01047526;XM_005405129 XP_005405186 MODEL 8720376 protein-coding LOC102005953 olfactory receptor 5B2-like NW_004955511 3211089 3212036 - 102005953 AGCD01066450;XM_013506385 XP_013361839 MODEL 8793760 protein-coding Atf6 activating transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); enzyme binding (ortholog); INVOLVED IN eye development (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of ATF6-mediated unfolded protein response (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH achromatopsia (ortholog); achromatopsia 7 (ortholog); acute myeloid leukemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fibrillar center (ortholog) NW_004955462 14352956 14553299 - 102005451 AGCD01049445;AGCD01049446;AGCD01049447;AGCD01049448;AGCD01049449;AGCD01049450;GBDJ01424155;XM_005398327 XP_005398384 MODEL 8801313 protein-coding Il1rap interleukin 1 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-1 receptor activity (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-33-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Disease Progression (ortholog); FOUND IN glutamatergic synapse (ortholog); interleukin-1 receptor complex (ortholog); protein-containing complex (ortholog) NW_004955420 17463493 17591054 - 102014674 AGCD01021022;AGCD01021023;AGCD01021024;GBDK01278591;XM_005383222;XM_013513507;XM_013513508;XM_013513509;XM_013513510 XP_005383279;XP_013368961;XP_013368962;XP_013368963;XP_013368964 MODEL 9061346 ncrna LOC102004904 uncharacterized LOC102004904 NW_004955409 15374756 15399313 - 102004904 AGCD01009675;AGCD01009676;GBDF01210918;XR_259784 MODEL 9028170 protein-coding Eps8l2 EPS8 signaling adaptor L2 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 106 (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein-containing complex (ortholog) NW_004955476 11371928 11390588 - 102012192 AGCD01055454;AGCD01055455;AGCD01055456;GBBH01063738;GBDI01006668;XM_005401820 XP_005401877 MODEL 8956956 protein-coding Cdkn2c cyclin dependent kinase inhibitor 2C ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); oligodendrocyte differentiation (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); disease of cellular proliferation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955464 8022596 8028241 - 102027157 AGCD01050078;GBDK01027484;XM_005398611 XP_005398668 MODEL 8905729 protein-coding LOC102008583 olfactory receptor 2J3-like NW_004955576 1306942 1307865 + 102008583 AGCD01075370;XM_005413944 XP_005414001 MODEL 8819921 protein-coding Agpat5 1-acylglycerol-3-phosphate O-acyltransferase 5 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acylglycerol metabolic process (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog); nuclear envelope (ortholog) NW_004955403 54005001 54052363 - 102023319 AGCD01003083;AGCD01003084;GBBH01005916;GBCQ01126069;XM_013514614 XP_013370068 MODEL 8846483 ncrna LOC102013708 uncharacterized LOC102013708 NW_004955466 8458324 8467859 - 102013708 AGCD01050989;GBCB01072536;XR_001236826;XR_001236827 MODEL 8799099 protein-coding Acer3 alkaline ceramidase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN ceramide catabolic process (ortholog); inflammatory response (ortholog); myelination (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955414 14741027 14846931 - 102012949 AGCD01015156;AGCD01015157;AGCD01015158;AGCD01015159;AGCD01015160;GBCB01075983;GBDF01123305;XM_005379846 XP_005379903 MODEL 8757153 protein-coding Socs2 suppressor of cytokine signaling 2 ENCODES a protein that exhibits growth hormone receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); growth hormone receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); ductal carcinoma in situ (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) NW_004955405 30349956 30623849 + 102026937 AGCD01005272;AGCD01005273;AGCD01005274;AGCD01005275;AGCD01005276;GBDI01171449;XM_005374469;XM_005374471;XM_005374472;XM_013518322;XM_013518324;XM_013518330;XM_013518331;XM_013518336;XM_013518338;XM_013518343;XM_013518347;XM_013518351;XM_013518360;XM_013518369;XM_013518373;XM_013518380;XR_001235628;XR_001235629 XP_005374526;XP_005374528;XP_005374529;XP_013373776;XP_013373778;XP_013373784;XP_013373785;XP_013373790;XP_013373792;XP_013373797;XP_013373801;XP_013373805;XP_013373814;XP_013373823;XP_013373827;XP_013373834 MODEL 8714543 pseudo LOC102007462 vesicle-associated membrane protein 8 pseudogene NW_004955434 10962508 10964570 + 102007462 AGCD01032368 MODEL 10303346 ncrna LOC102004537 uncharacterized LOC102004537 NW_004955450 329137 331150 - 102004537 AGCD01042328;GBDF01061386;XR_001235908;XR_001235909 MODEL 8961508 protein-coding Cd69 CD69 molecule ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of T cell migration (ortholog); ASSOCIATED WITH arthritis (ortholog); Experimental Arthritis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955413 5579037 5586238 + 102020103 AGCD01013683;GBBH01203292;XM_005378883 XP_005378940 MODEL 39131858 rrna 5S_rRNA 5S ribosomal RNA 8703620 protein-coding Plin5 perilipin 5 ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN cell activation (ortholog); gene expression (ortholog); intracellular signaling cassette (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955495 4406590 4414783 + 102008639 AGCD01061922;GBCB01043643;XM_013505191;XM_013505192 XP_013360645;XP_013360646 MODEL 8964912 pseudo LOC102011785 protein BEX3-like NW_004955425 1246748 1250299 + 102011785 AGCD01025219 MODEL 9007412 protein-coding Sftpd surfactant protein D ENCODES a protein that exhibits galactomannan binding (ortholog); identical protein binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN defense response to virus (ortholog); innate immune response in mucosa (ortholog); lung alveolus development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; surfactant homeostasis pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); multivesicular body (ortholog) NW_004955510 213468 226096 + 102025710 AGCD01066142;GBDK01010352;XM_005407866;XM_005407867;XM_013506331 XP_005407923;XP_005407924;XP_013361785 MODEL 8783087 protein-coding Cx3cr1 C-X3-C motif chemokine receptor 1 ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); C-X3-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); autocrine signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); age related macular degeneration 12 (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell surface (ortholog); dendritic tree (ortholog); neuronal cell body membrane (ortholog) NW_004955427 24691206 24705599 + 102024484 AGCD01027517;GBCE01117768;XM_005386557 XP_005386614 MODEL 8929087 protein-coding Loxhd1 lipoxygenase homology PLAT domains 1 INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 77 (ortholog); FOUND IN stereocilium (ortholog) NW_004955402 31985616 32144040 - 102030583 AGCD01000810;AGCD01000811;AGCD01000812;AGCD01000813;AGCD01000814;GBDF01270739;XM_005372874;XM_005372875 XP_005372931;XP_005372932 MODEL 8961855 protein-coding LOC102009744 lipocalin-1-like NW_004955513 2591903 2597295 + 102009744 AGCD01066882;GBBH01003724;XM_005408420 XP_005408477 MODEL 8893509 pseudo LOC102003109 zinc finger CCCH domain-containing protein 11A pseudogene NW_004955467 2952870 2954035 + 102003109 AGCD01051321 MODEL 8853190 protein-coding Cbx3 chromobox 3 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); histone H1K26me1 reader activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); DNA damage response (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromatin (ortholog); chromatin lock complex (ortholog); chromocenter (ortholog) NW_004955410 28042627 28052616 + 102028168 AGCD01011228;AGCD01011229;GBDF01046149;XM_005377442;XM_005377443 XP_005377499;XP_005377500 MODEL 8999496 protein-coding LOC102010931 olfactory receptor 9G4-like NW_004955511 1803413 1804351 - 102010931 AGCD01066380;XM_005407978 XP_005408035 MODEL 8972327 protein-coding Rcc1l RCC1 like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial fusion (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); mitochondrial small ribosomal subunit assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) NW_004955456 13285753 13300244 - 102012283 AGCD01046583;AGCD01046584;AGCD01046585;GBBH01209062;GBDF01156653;XM_013520534 XP_013375988 MODEL 9010550 protein-coding Cfap107 cilia and flagella associated protein 107 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955486 538170 551522 - 102019277 AGCD01058861;GBDF01209065;XM_005403937;XM_013504130;XR_001231094 XP_005403994;XP_013359584 MODEL 39134195 misc_rna 7SK 7SK RNA 8909051 protein-coding Ano10 anoctamin 10 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive spinocerebellar ataxia 10 (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 27572561 27682099 + 102014252 AGCD01021456;AGCD01021457;GBDF01079973;XM_005383486 XP_005383543 MODEL 9048669 protein-coding Alox5 arachidonate 5-lipoxygenase ENCODES a protein that exhibits arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 5-lipoxygenase activity (ortholog); arachidonate 8(S)-lipoxygenase activity (ortholog); INVOLVED IN dendritic cell migration (ortholog); glucose homeostasis (ortholog); humoral immune response (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955546 2495226 2550909 + 102016101 AGCD01072095;AGCD01072096;AGCD01072097;GBDK01320072;XM_005411792;XM_005411793 XP_005411849;XP_005411850 MODEL 8883967 pseudo LOC102014079 10 kDa heat shock protein, mitochondrial pseudogene NW_004955521 2000294 2000598 + 102014079 AGCD01068200 MODEL 9010718 protein-coding C1qtnf1 C1q and TNF related 1 ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN negative regulation of platelet activation (ortholog); negative regulation of platelet aggregation (ortholog); positive regulation of aldosterone secretion (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955506 3680352 3700729 - 102026658 AGCD01065318;AGCD01065319;GBBH01050432;XM_005407346;XM_005407347;XM_013506098 XP_005407403;XP_005407404;XP_013361552 MODEL 39132054 rrna 5S_rRNA 5S ribosomal RNA 8858677 ncrna LOC102012147 uncharacterized LOC102012147 NW_004955652 44834 52840 - 102012147 AGCD01077823;AGCD01077824;GBBH01127077;XR_265180 MODEL 8988961 protein-coding Slc35g1 solute carrier family 35 member G1 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); intestinal absorption (ortholog); regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955507 423354 428051 + 102004094 AGCD01065472;GBBH01041247;XM_013506161 XP_013361615 MODEL 8765380 protein-coding Dmrta2 DMRT like family A2 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cerebral cortex regionalization (ortholog); dopaminergic neuron differentiation (ortholog); neuron fate specification (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleus (ortholog) NW_004955464 8493392 8498007 + 102028840 AGCD01050088;AGCD01050089;GBBH01118181;GBBH01182835;XM_013521761 XP_013377215 MODEL 8924399 protein-coding Boc BOC cell adhesion associated, oncogene regulated ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN axon guidance (ortholog); cell projection organization (ortholog); positive regulation of myoblast differentiation (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); growth cone (ortholog) NW_004955427 13424478 13492527 + 102003160 AGCD01027249;AGCD01027250;AGCD01027251;GBDJ01189062;XM_005386397;XM_005386398;XM_013515110;XM_013515111;XM_013515112 XP_005386454;XP_005386455;XP_013370564;XP_013370565;XP_013370566 MODEL 9032520 pseudo LOC102018336 40S ribosomal protein SA pseudogene NW_004955440 15872537 15873432 + 102018336 AGCD01036502 MODEL 8857853 protein-coding Prkcg protein kinase C gamma ENCODES a protein that exhibits calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chemosensory behavior (ortholog); innervation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 14 (ortholog); FOUND IN calyx of Held (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955604 262182 279259 - 102018143 AGCD01076875;GBBH01155679;XM_005414871 XP_005414928 MODEL 39134069 misc_rna 7SK 7SK RNA 8853612 protein-coding Aak1 AP2 associated kinase 1 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); Notch binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); presynaptic endocytosis (ortholog); protein stabilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN calyx of Held (ortholog); cell leading edge (ortholog); clathrin complex (ortholog) NW_004955424 15480783 15640471 + 102014583 AGCD01024717;AGCD01024718;AGCD01024719;GBDF01234309;XM_005385640;XM_005385641;XM_005385642;XM_005385643;XM_005385644;XM_005385645;XM_005385646;XM_005385647;XM_013514694;XM_013514695 XP_005385697;XP_005385698;XP_005385699;XP_005385700;XP_005385701;XP_005385702;XP_005385703;XP_005385704;XP_013370148;XP_013370149 MODEL 8865060 protein-coding Wdr41 WD repeat domain 41 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); guanyl-nucleotide exchange factor complex (ortholog) NW_004955425 23366130 23510897 + 102016494 AGCD01025845;AGCD01025846;GBDF01088944;XM_005386025;XM_013514857 XP_005386082;XP_013370311 MODEL 8784614 protein-coding LOC102022423 uncharacterized LOC102022423 NW_004955529 3940781 3982450 + 102022423 AGCD01069807;AGCD01069808;GBDJ01291530;XM_005410082 XP_005410139 MODEL 8745055 protein-coding Fhl5 four and a half LIM domains 5 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH migraine (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955411 22583314 22619281 + 102018370 AGCD01012095;GBDF01008124;XM_005377785;XM_005377787;XM_013510707 XP_005377842;XP_005377844;XP_013366161 MODEL 8993297 protein-coding LOC102007058 keratin, type II cuticular Hb5 NW_004955547 2711781 2718828 - 102007058 AGCD01072294;GBCB01095717;XM_005411935 XP_005411992 MODEL 8827187 protein-coding LOC102008214 putative olfactory receptor 52P1 NW_004955414 21691721 21692701 + 102008214 AGCD01015427;XM_005380500 XP_005380557 MODEL 39134202 misc_rna 7SK 7SK RNA 8893515 pseudo LOC102004538 nuclease-sensitive element-binding protein 1 pseudogene NW_004955591 118340 236564 + 102004538 AGCD01076245;AGCD01076246;AGCD01076247;AGCD01076248;AGCD01076249;AGCD01076250 MODEL 8835493 ncrna LOC102013351 uncharacterized LOC102013351 NW_004955444 12343789 12350586 + 102013351 AGCD01039069;GBCE01054272;XR_262262;XR_262263 MODEL 8792407 protein-coding LOC102010135 potassium channel subfamily U member 1 NW_004955463 12558868 12692079 + 102010135 AGCD01049855;AGCD01049856;GBDF01257773;XM_005398473 XP_005398530 MODEL 39131859 rrna 5S_rRNA 5S ribosomal RNA 9018476 trna Trnal-aag transfer RNA leucine (anticodon AAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955493;NW_004955465;NW_004955550;NW_004955550 931996;13766471;1486047;1410172 932077;13766552;1486128;1410253 +;-;-;+ 101978790 AGCD01050622;AGCD01060872;AGCD01072566;AGCD01072577 MODEL 8837543 protein-coding Cldnd1 claudin domain containing 1 INVOLVED IN negative regulation of membrane permeability (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); tight junction (ortholog) NW_004955427 101159 108655 - 102014807 AGCD01026806;AGCD01026807;GBCC01001269;XM_005386271;XM_005386272;XM_005386273;XM_013515217 XP_005386328;XP_005386329;XP_005386330;XP_013370671 MODEL 8821744 protein-coding LOC102004158 protocadherin beta-4 NW_004955415 12759671 12762676 - 102004158 AGCD01016228;AGCD01016229;XM_013512118 XP_013367572 MODEL 8768936 pseudo LOC102005954 ZZ-type zinc finger-containing protein 3 pseudogene NW_004955430 8912029 8917478 - 102005954 AGCD01029398 MODEL 39131297 protein-coding IL1RAPL1 interleukin 1 receptor accessory protein like 1 8969352 protein-coding Atf6b activating transcription factor 6 beta ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of ATF6-mediated unfolded protein response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955437 582083 592026 - 102008979 AGCD01034149;AGCD01034150;GBCQ01065006;XM_005389410;XM_013516900 XP_005389467;XP_013372354 MODEL 8952039 protein-coding Adamtsl5 ADAMTS like 5 ENCODES a protein that exhibits heparin binding (ortholog); microfibril binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955764 4813 12653 + 102005545 AGCD01078306;GBDK01142911;XM_005415096;XM_013510187 XP_005415153;XP_013365641 MODEL 8909546 protein-coding Ache acetylcholinesterase (Cartwright blood group) ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholinesterase activity (ortholog); cholinesterase activity (ortholog); INVOLVED IN acetylcholine catabolic process (ortholog); acetylcholine metabolic process (ortholog); acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine metabolic pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute stress disorder (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN axolemma; dendrite; external side of plasma membrane NW_004955573 79606 85799 + 102008995 AGCD01074960;AGCD01074961;GBBH01208078;XM_005413673;XM_005413675;XM_005413676;XM_013509453;XM_013509454 XP_005413730;XP_005413732;XP_005413733;XP_013364907;XP_013364908 MODEL 8721762 pseudo LOC102008585 U6 snRNA-associated Sm-like protein LSm3 pseudogene NW_004955583 83314 85152 - 102008585 AGCD01075793 MODEL 8919651 protein-coding Eps8l3 EPS8 signaling adaptor L3 ENCODES a protein that exhibits actin filament binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of hair cycle (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); hypotrichosis 5 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 13261730 13277117 - 102011142 AGCD01033199;GBDI01324674;XM_005388899;XM_005388900;XM_005388901 XP_005388956;XP_005388957;XP_005388958 MODEL 8799751 protein-coding Agps alkylglycerone phosphate synthase ENCODES a protein that exhibits alkylglycerone-phosphate synthase activity (ortholog); INVOLVED IN lipid biosynthetic process (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN peroxisome (ortholog) NW_004955403 19253784 19381883 - 102006089 AGCD01002121;AGCD01002122;AGCD01002123;AGCD01002124;GBDJ01175162;XM_005373401 XP_005373458 MODEL 8961726 protein-coding Cxadr CXADR cell adhesion molecule ENCODES a protein that exhibits beta-catenin binding (ortholog); cell adhesion molecule binding (ortholog); connexin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); AV node cell to bundle of His cell communication (ortholog); AV node cell-bundle of His cell adhesion involved in cell communication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog) NW_004955407 18894853 18927129 + 102005228 AGCD01007289;GBCE01142120;GBDJ01239347;XM_013503863;XM_013503866 XP_013359317;XP_013359320 MODEL 8724001 pseudo LOC102010932 olfactory receptor 10AG1-like NW_004955511 901202 903998 - 102010932 AGCD01066346 MODEL 8954386 protein-coding Rsad1 radical S-adenosyl methionine domain containing 1 ENCODES a protein that exhibits heme binding (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 11257105 11273884 - 102012269 AGCD01043343;AGCD01043344;AGCD01043345;GBDK01430782;XM_005394167;XM_005394168;XM_005394169 XP_005394224;XP_005394225;XP_005394226 MODEL 8990945 protein-coding LOC102013712 olfactory receptor 10A5 NW_004955414 22744451 22787701 + 102013712 AGCD01015473;AGCD01015474;AGCD01015475;AGCD01015476;AGCD01015477;AGCD01015478;XM_013511738 XP_013367192 MODEL 8790007 protein-coding Aqp9 aquaporin 9 ENCODES a protein that exhibits channel activity (ortholog); glycerol channel activity (ortholog); hydrogen peroxide channel activity (ortholog); INVOLVED IN amine transport (ortholog); canalicular bile acid transport (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Arsenic Poisoning (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955450 16253706 16346602 - 102017410 AGCD01042834;AGCD01042835;AGCD01042836;AGCD01042837;AGCD01042838;AGCD01042839;AGCD01042840;GBDF01044252;XM_005393841;XM_005393842;XM_005393843;XM_013518820 XP_005393898;XP_005393899;XP_005393900;XP_013374274 MODEL 8900280 protein-coding Rcc2 regulator of chromosome condensation 2 ENCODES a protein that exhibits microtubule binding (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN chromosome passenger complex localization to kinetochore (ortholog); establishment of protein localization (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric core domain (ortholog); early endosome membrane (ortholog) NW_004955527 1490179 1512111 + 102019102 AGCD01069404;AGCD01069405;AGCD01069406;AGCD01069407;GBCE01077274;GBDJ01083813;XM_013507406 XP_013362860 MODEL 9009691 protein-coding Cd7 CD7 molecule ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN homeostasis of number of cells within a tissue (ortholog); positive regulation of T cell cytokine production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); cervical cancer (ortholog) NW_004955506 863188 865857 + 102011462 AGCD01065239;GBDI01280378;XM_005407205;XM_005407206 XP_005407262;XP_005407263 MODEL 8746305 pseudo LOC102011791 nuclear receptor-binding factor 2-like NW_004955512 4113871 4117507 - 102011791 AGCD01066729 MODEL 8989909 ncrna LOC102008215 uncharacterized LOC102008215 NW_004955415 2147670 2175932 + 102008215 AGCD01015895;AGCD01015896;AGCD01015897;AGCD01015898;GBDK01355203;XR_260259 MODEL 8963868 protein-coding LOC102004907 speedy protein E4-like NW_004955460 10750151 10756120 + 102004907 AGCD01048604;GBDF01286262;XM_005397847;XM_013521141 XP_005397904;XP_013376595 MODEL 9064154 protein-coding Cdkn2d cyclin dependent kinase inhibitor 2D ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagic cell death (ortholog); DNA synthesis involved in DNA repair (ortholog); negative regulation of cell cycle G1/S phase transition (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH lung cancer (ortholog); Stomach Neoplasms (ortholog); FOUND IN cyclin D2-CDK4 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955495 1755280 1759125 - 102028209 AGCD01061723;AGCD01061724;GBCB01038555;GBCQ01125616;XM_013505142 XP_013360596 MODEL 8749852 protein-coding Slc35g2 solute carrier family 35 member G2 ASSOCIATED WITH melanoma (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog); synaptic vesicle membrane (ortholog) NW_004955501 1974126 1998547 - 102017794 AGCD01064065;AGCD01064066;AGCD01064067;GBCQ01014308;XM_005406778 XP_005406835 MODEL 8888627 ncrna LOC102009749 uncharacterized LOC102009749 NW_004955519 2189856 2320813 - 102009749 AGCD01067917;AGCD01067918;AGCD01067919;AGCD01067920;AGCD01067921;AGCD01067922;AGCD01067923;AGCD01067924;GBDK01382059;XR_001231859;XR_001231860;XR_001231861 MODEL 9008316 protein-coding Dmrtb1 DMRT like family B with proline rich C-terminal 1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog) NW_004955464 5719916 5726768 - 102025221 AGCD01050011;AGCD01050012;GBDF01080541;XM_013521575 XP_013377029 MODEL 9066078 protein-coding Bod1 biorientation of chromosomes in cell division 1 ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic sister chromatid biorientation (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); outer kinetochore (ortholog); Set1C/COMPASS complex (ortholog) NW_004955408 26235229 26242576 - 102025658 AGCD01008665;GBDF01008932;XM_005376586 XP_005376643 MODEL 155888854 protein-coding ATXN3L ataxin 3 like 9016007 protein-coding Sfxn1 sideroflexin 1 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-serine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); iron ion transport (ortholog); L-alanine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955408 28054211 28105294 + 102006545 AGCD01008703;AGCD01008704;AGCD01008705;AGCD01008706;AGCD01008707;GBDK01358301;XM_005376362;XM_013509460 XP_005376419;XP_013364914 MODEL 9001109 protein-coding Loxl1 lysyl oxidase like 1 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor (ortholog); protein-lysine 6-oxidase activity (ortholog); INVOLVED IN aorta development (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN acrosomal vesicle (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) NW_004955450 3715109 3734641 - 102022243 AGCD01042442;GBBH01119228;XM_005393588 XP_005393645 MODEL 8904411 ncrna LOC102003110 uncharacterized LOC102003110 NW_004955468 3568605 3569514 - 102003110 AGCD01051863;GBDI01159838;XR_001236890;XR_263383 MODEL 8788375 pseudo LOC102007463 60S ribosomal protein L21 pseudogene NW_004955434 3733419 3736535 - 102007463 AGCD01032143 MODEL 9021527 protein-coding Cbx4 chromobox 4 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); histone H3K27me3 reader activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955506 2998241 3002788 + 102024145 AGCD01065306;GBCE01104488;GBDK01359474;XM_013506139 XP_013361593 MODEL 8773577 protein-coding Cfap119 cilia and flagella associated protein 119 INVOLVED IN gene expression (ortholog); single fertilization (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955493 7622564 7627094 - 102017465 AGCD01061206;GBDI01246809;XM_005405267;XM_013504765;XM_013504766;XM_013504767 XP_005405324;XP_013360219;XP_013360220;XP_013360221 MODEL 8717808 pseudo LOC102008974 DNA primase small subunit pseudogene NW_004955434 12000624 12001975 + 102008974 AGCD01032382 MODEL 8872215 protein-coding Wdr43 WD repeat domain 43 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); transcription elongation factor activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); regulation of stem cell population maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955469 10777332 10835577 + 102016256 AGCD01052550;AGCD01052551;GBDF01226152;XM_005400538;XM_005400539 XP_005400595;XP_005400596 MODEL 8994818 protein-coding Epsti1 epithelial stromal interaction 1 INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955518 790815 919869 - 102004964 AGCD01067745;AGCD01067746;AGCD01067747;AGCD01067748;AGCD01067749;GBDI01325591;XM_005409056;XM_013506970;XM_013506971 XP_005409113;XP_013362424;XP_013362425 MODEL 9059509 protein-coding LOC102022432 uncharacterized LOC102022432 NW_004955561 880407 969602 - 102022432 AGCD01073827;GBDF01000326;XM_013509074 XP_013364528 MODEL 8923359 protein-coding Ano2 anoctamin 2 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN chloride transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); non-motile cilium (ortholog); plasma membrane (ortholog) NW_004955413 3333275 3650255 - 102010569 AGCD01013569;AGCD01013570;AGCD01013571;AGCD01013572;AGCD01013573;AGCD01013574;AGCD01013575;AGCD01013576;AGCD01013577;AGCD01013578;GBDF01207637;XM_013511280 XP_013366734 MODEL 8848885 ncrna LOC102007060 uncharacterized LOC102007060 NW_004955554 703446 714957 + 102007060 AGCD01072953;GBDF01082739;XR_001232295;XR_264946 MODEL 39134203 misc_rna 7SK 7SK RNA 8876868 protein-coding C1qtnf12 C1q and TNF related 12 ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN negative regulation of gluconeogenesis (ortholog); negative regulation of inflammatory response (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 9541466 9545231 + 102028093 AGCD01059190;GBDF01279918;XM_005404246 XP_005404303 MODEL 8713648 protein-coding Plk1 polo like kinase 1 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); centrosome cycle (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); colorectal cancer (ortholog); COVID-19 (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955493 2206353 2217231 + 102023160 AGCD01060935;GBCQ01178810;XM_005405103 XP_005405160 MODEL 39131860 rrna 5S_rRNA 5S ribosomal RNA 8720941 ncrna LOC102005963 uncharacterized LOC102005963 NW_004955526 3269899 3285554 + 102005963 AGCD01069333;AGCD01069334;GBDI01352716;XR_001231967;XR_001231968;XR_264661 MODEL 8717837 ncrna LOC102010136 uncharacterized LOC102010136 NW_004955411 9963098 9981570 - 102010136 AGCD01011768;GBDF01305717;XR_259928 MODEL 9030436 protein-coding Cldnd2 claudin domain containing 2 ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog) NW_004955558 1030594 1032198 + 102011253 AGCD01073411;GBDF01082039;XM_005412679;XM_013508904;XM_013508905;XM_013508907;XM_013508908 XP_005412736;XP_013364358;XP_013364359;XP_013364361;XP_013364362 MODEL 8756733 protein-coding Il1rapl2 interleukin 1 receptor accessory protein like 2 INVOLVED IN regulation of presynapse assembly (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog) NW_004955548 1462746 2623622 + 102005640 AGCD01072376;AGCD01072377;AGCD01072378;AGCD01072379;AGCD01072380;AGCD01072381;AGCD01072382;AGCD01072383;AGCD01072384;AGCD01072385;AGCD01072386;AGCD01072387;AGCD01072388;AGCD01072389;AGCD01072390;AGCD01072391;AGCD01072392;AGCD01072393;AGCD01072394;AGCD01072395;AGCD01072396;AGCD01072397;AGCD01072398;AGCD01072399;AGCD01072400;AGCD01072401;AGCD01072402;AGCD01072403;AGCD01072404;AGCD01072405;AGCD01072406;AGCD01072407;XM_005412011 XP_005412068 MODEL 8736502 protein-coding Adap1 ArfGAP with dual PH domains 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955460 8635463 8674455 - 102013805 AGCD01048528;AGCD01048529;GBBH01150083;GBCB01109073;XM_005397794 XP_005397851 MODEL 9060666 protein-coding Socs3 suppressor of cytokine signaling 3 ENCODES a protein that exhibits miRNA binding (ortholog); phosphotyrosine residue binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN erythropoietin signaling pathway; insulin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Burns (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog) NW_004955506 4222455 4225563 + 102007451 AGCD01065328;GBCE01031782;XM_005407378 XP_005407435 MODEL 8860210 protein-coding LOC102014081 vomeronasal type-2 receptor 116-like NW_004955524 3713189 3734931 + 102014081 AGCD01068924;AGCD01068925;XM_013507199 XP_013362653 MODEL 8861739 protein-coding Alox5ap arachidonate 5-lipoxygenase activating protein ENCODES a protein that exhibits arachidonate 5-lipoxygenase activity (ortholog); arachidonate binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); leukotriene biosynthetic process (ortholog); leukotriene production involved in inflammatory response (ortholog); PARTICIPATES IN leukotriene metabolic pathway; lipoxygenase mediated pathway of arachidonic acid metabolism; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955431 15071535 15097496 - 102019834 AGCD01030345;GBDI01216308;XM_005387741;XM_013515900 XP_005387798;XP_013371354 MODEL 8964911 pseudo LOC102010935 histone-binding protein RBBP4 pseudogene NW_004955515 5132224 5133419 - 102010935 AGCD01067339 MODEL 39132056 rrna 5S_rRNA 5S ribosomal RNA 9029950 ncrna LOC102013717 uncharacterized LOC102013717 NW_004955477 5443035 5479970 + 102013717 AGCD01055595;GBDF01054100;XR_001230818;XR_263655;XR_263656 MODEL 8972326 pseudo LOC102012149 high mobility group protein B1-like NW_004958114 9 505 + 102012149 AGCD01081510 MODEL 8779027 protein-coding LOC102004541 aldehyde oxidase 4 NW_004955403 694922 799923 - 102004541 AGCD01001705;AGCD01001706;AGCD01001707;AGCD01001708;GBBH01002989;XM_005373240;XM_005373242;XM_013511853;XM_013511857 XP_005373297;XP_005373299;XP_013367307;XP_013367311 MODEL 8722851 ncrna LOC102018350 uncharacterized LOC102018350 NW_004955402 45846571 45854310 + 102018350 AGCD01001142;GBCQ01008628;XR_259093 MODEL 8790989 trna Trnal-caa transfer RNA leucine (anticodon CAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465;NW_004955418;NW_004955465;NW_004955465 13283889;29926451;13908819;13888432 13283993;29926556;13908923;13888537 -;+;+;- 101978789 AGCD01019491;AGCD01050597;AGCD01050633;AGCD01050634 MODEL 8863283 protein-coding Cd72 CD72 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN negative regulation of B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955472 663451 670890 + 102011304 AGCD01053345;AGCD01053346;GBBH01214301;GBDI01215445;XM_013522955;XM_013522956;XM_013522957 XP_013378409;XP_013378410;XP_013378411 MODEL 39134070 misc_rna 7SK 7SK RNA 8702681 protein-coding Atf7 activating transcription factor 7 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN heart development (ortholog); hematopoietic progenitor cell differentiation (ortholog); hepatocyte apoptotic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955458 803738 898847 - 102023878 AGCD01047154;AGCD01047155;AGCD01047156;GBCB01056445;XM_005397189;XM_005397190 XP_005397246;XP_005397247 MODEL 8791147 protein-coding Prkch protein kinase C eta ENCODES a protein that exhibits diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); enzyme binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); negative regulation of glial cell apoptotic process (ortholog); negative regulation of translation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955466 8178323 8393446 - 102013069 AGCD01050981;AGCD01050982;AGCD01050983;AGCD01050984;AGCD01050985;AGCD01050986;AGCD01050987;GBBH01024897;GBDF01082374;XM_005399165 XP_005399222 MODEL 8708389 protein-coding Slc35g6 solute carrier family 35 member G6 NW_004955467 9447756 9450653 - 102012080 AGCD01051511;GBDF01001619;XM_013522195 XP_013377649 MODEL 9060353 protein-coding Acin1 apoptotic chromatin condensation inducer 1 INVOLVED IN apoptotic chromosome condensation (ortholog); erythrocyte differentiation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ASAP complex (ortholog); exon-exon junction complex (ortholog); nuclear speck (ortholog) NW_004955409 37206675 37246851 + 102024313 AGCD01010498;AGCD01010499;GBDI01000873;GBDK01005483;XM_005377090 XP_005377147 MODEL 8965003 protein-coding Agr2 anterior gradient 2, protein disulphide isomerase family member ENCODES a protein that exhibits dystroglycan binding (ortholog); epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); digestive tract morphogenesis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955410 19984768 19995446 - 102023236 AGCD01011039;AGCD01011040;GBDF01005562;XM_005377338;XM_005377339 XP_005377395;XP_005377396 MODEL 8924495 pseudo LOC102007465 GPALPP motifs-containing protein 1 pseudogene NW_004955436 21483145 21488677 - 102007465 AGCD01034055 MODEL 8741554 protein-coding Cxcl10 C-X-C motif chemokine ligand 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955433 748392 750890 - 102012569 AGCD01031336;GBDJ01185780;XM_013516266 XP_013371720 MODEL 9061361 protein-coding Fhod1 formin homology 2 domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of centrosome localization (ortholog); nuclear migration (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); intercalated disc (ortholog); nucleus (ortholog) NW_004955484 9380202 9396400 + 102007435 AGCD01058415;GBDK01073619;XM_005403665;XM_005403666 XP_005403722;XP_005403723 MODEL 8905111 pseudo LOC102013356 coiled-coil domain-containing protein 152-like NW_004955402 14247257 14248568 + 102013356 AGCD01000422 MODEL 8960099 protein-coding Loxl2 lysyl oxidase like 2 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); oligosaccharide binding (ortholog); INVOLVED IN collagen fibril organization (ortholog); endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN basement membrane (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955403 46503226 46583807 - 102017940 AGCD01002860;AGCD01002861;AGCD01002862;GBBH01137562;XM_005373698 XP_005373755 MODEL 8850508 protein-coding Aqr aquarius intron-binding spliceosomal factor ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 2214990 2304924 - 102004161 AGCD01016851;AGCD01016852;AGCD01016853;GBBH01187407;GBCE01117658;XM_013512621 XP_013368075 MODEL 8888683 protein-coding Cbx5 chromobox 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromosome condensation (ortholog); DNA damage response (ortholog); heterochromatin formation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromocenter (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955458 1486951 1529649 - 102004043 AGCD01047184;AGCD01047185;AGCD01047186;AGCD01047187;AGCD01047188;GBDF01009957;XM_005397212;XM_005397213;XM_005397215;XM_013520945 XP_005397269;XP_005397270;XP_005397272;XP_013376399 MODEL 8935685 protein-coding LOC102007062 S-phase kinase-associated protein 1-like NW_004955445 2496144 2496743 - 102007062 AGCD01039356;XM_005392261 XP_005392318 MODEL 8704332 pseudo LOC102009750 H-2 class II histocompatibility antigen, E-S beta chain pseudogene NW_004955433 10616032 10617329 + 102009750 AGCD01031633 MODEL 8944247 protein-coding C1qtnf2 C1q and TNF related 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); positive regulation of fatty acid oxidation (ortholog); positive regulation of glycogen biosynthetic process (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955408 14219263 14266832 - 102026189 AGCD01008389;AGCD01008390;AGCD01008391;GBDI01008429;XM_005376261;XM_005376262;XM_005376264;XM_013508952;XM_013508968 XP_005376318;XP_005376319;XP_005376321;XP_013364406;XP_013364422 MODEL 8867819 protein-coding Cdkn3 cyclin dependent kinase inhibitor 3 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955409 9015220 9030983 - 102004248 AGCD01009427;AGCD01009428;GBDF01239346;XM_005376768 XP_005376825 MODEL 8732096 protein-coding Aamdc adipogenesis associated Mth938 domain containing INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of fat cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog) NW_004955414 14058445 14085652 - 102007882 AGCD01015141;GBCB01002051;XM_005379828;XM_005379829;XM_005379830;XM_005379831;XM_005379832;XM_005379833 XP_005379885;XP_005379886;XP_005379887;XP_005379888;XP_005379889;XP_005379890 MODEL 39134196 misc_rna 7SK 7SK RNA 8912971 protein-coding Bod1l1 biorientation of chromosomes in cell division 1 like 1 INVOLVED IN DNA damage response (ortholog); replication fork processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); Set1C/COMPASS complex (ortholog) NW_004955480 10143053 10189194 + 102025577 AGCD01056757;GBCE01104986;GBDF01162845;XM_013503319 XP_013358773 MODEL 8849488 protein-coding Cbx6 chromobox 6 ENCODES a protein that exhibits single-stranded RNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH glioblastoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); heterochromatin (ortholog); nuclear body (ortholog) NW_004955413 24955721 24966015 - 102026204 AGCD01014388;GBBH01142614;XM_005379281;XM_005379282 XP_005379338;XP_005379339 MODEL 8791816 ncrna LOC102010145 uncharacterized LOC102010145 NW_004955414 6341018 6344268 - 102010145 AGCD01014918;GBDK01371346;XR_001233178;XR_260156 MODEL 8811857 pseudo LOC102003112 olfactory receptor 10J4-like NW_004955468 11229311 11232918 + 102003112 AGCD01052123 MODEL 8836236 protein-coding Dmrtc2 DMRT like family C2 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN heterochromatin organization (ortholog); male meiosis I (ortholog); spermatid nucleus elongation (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN XY body (ortholog) NW_004955555 983451 989044 - 102011917 AGCD01073054;AGCD01073055;GBDK01151937;XM_005412427;XM_013508722;XM_013508723;XM_013508724;XM_013508725;XM_013508726;XM_013508727;XM_013508728 XP_005412484;XP_013364176;XP_013364177;XP_013364178;XP_013364179;XP_013364180;XP_013364181;XP_013364182 MODEL 8870546 protein-coding Atxn7 ataxin 7 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); negative regulation of insulin-like growth factor receptor signaling pathway (ortholog); negative regulation of microtubule depolymerization (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955517 1897050 1980428 - 102018429 AGCD01067611;GBBH01188275;GBCB01002790;XM_013506935 XP_013362389 MODEL 8962580 protein-coding Plk2 polo like kinase 2 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); ATPase binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); long-term synaptic depression (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromatin (ortholog) NW_004955446 9671090 9676956 + 102008994 AGCD01040162;GBDF01005861;XM_005392671 XP_005392728 MODEL 8914831 protein-coding Sfxn2 sideroflexin 2 INVOLVED IN mitochondrial transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955485 7716916 7732122 - 102012098 AGCD01058672;GBCE01065073;XM_005403827;XM_005403828;XM_013504027;XM_013504028;XM_013504029;XM_013504030;XM_013504031;XM_013504033;XM_013504034;XM_013504035;XM_013504036;XR_001231068 XP_005403884;XP_005403885;XP_013359481;XP_013359482;XP_013359483;XP_013359484;XP_013359485;XP_013359487;XP_013359488;XP_013359489;XP_013359490 MODEL 8923345 protein-coding Cfap126 cilia and flagella associated protein 126 INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog) NW_004955468 13085324 13088022 - 102010466 AGCD01052198;GBDF01043651;XM_005400280;XM_005400281 XP_005400337;XP_005400338 MODEL 8856077 protein-coding LOC102008978 putative HLA class I histocompatibility antigen, alpha chain H NW_004955437 59805 63404 - 102008978 AGCD01034100;GBBH01004597;XM_013516921;XM_013516922;XM_013516923;XM_013516924;XR_001235068;XR_001235069 XP_013372375;XP_013372376;XP_013372377;XP_013372378 MODEL 8908808 ncrna LOC102004159 uncharacterized LOC102004159 NW_004955416 4090802 4096376 - 102004159 AGCD01016880;AGCD01016881;GBDF01075670;XR_001233284;XR_260352;XR_260353 MODEL 8777906 ncrna LOC102022433 uncharacterized LOC102022433 NW_004955444 14294781 14303672 - 102022433 AGCD01039120;AGCD01039121;GBDF01186408;XR_001235524;XR_262271 MODEL 8817094 protein-coding Epx eosinophil peroxidase ENCODES a protein that exhibits lactoperoxidase activity (ortholog); peroxidase activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); defense response to nematode (ortholog); eosinophil migration (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Eosinophilic Asthma (ortholog) NW_004955451 4818809 4828913 - 102029463 AGCD01043142;GBBH01198007;XM_005394034;XM_005394035 XP_005394091;XP_005394092 MODEL 8744291 protein-coding Ano3 anoctamin 3 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); detection of mechanical stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar hypoplasia (ortholog); FOUND IN cilium (ortholog) NW_004955476 5702888 6060545 + 102013601 AGCD01055314;AGCD01055315;AGCD01055316;AGCD01055317;AGCD01055318;AGCD01055319;AGCD01055320;AGCD01055321;AGCD01055322;GBDK01351306;XM_005401742;XM_005401743 XP_005401799;XP_005401800 MODEL 39134204 misc_rna 7SK 7SK RNA 39132058 rrna 5S_rRNA 5S ribosomal RNA 8740113 protein-coding Wdr44 WD repeat domain 44 ENCODES a protein that exhibits molecular sequestering activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cytosolic ciliogenesis (ortholog); negative regulation of cilium assembly (ortholog); regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brachydactyly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); microtubule (ortholog) NW_004955534 1492990 1599402 - 102017913 AGCD01070498;AGCD01070499;AGCD01070500;AGCD01070501;AGCD01070502;AGCD01070503;GBCB01089438;XM_005410462 XP_005410519 MODEL 8980825 ncrna LOC102008587 uncharacterized LOC102008587 NW_004955450 5676012 5702239 + 102008587 AGCD01042508;AGCD01042509;GBDF01280526;XR_001235879;XR_262532 MODEL 8798300 ncrna LOC102008216 uncharacterized LOC102008216 NW_004955474 1145810 1151690 + 102008216 AGCD01054239;GBDJ01195565;XR_001230733 MODEL 39131861 rrna 5S_rRNA 5S ribosomal RNA 8836743 protein-coding LOC102007067 laminin subunit alpha-3-like NW_004955402 12016293 12019255 + 102007067 AGCD01000337;XM_005372709 XP_005372766 MODEL 39134071 misc_rna 7SK 7SK RNA 8888912 protein-coding LOC102011792 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 NW_004955431 5628023 5671009 + 102011792 AGCD01030037;AGCD01030038;XM_013515893;XM_013515894 XP_013371347;XP_013371348 MODEL 9063186 protein-coding Cd74 CD74 molecule ENCODES a protein that exhibits amyloid-beta binding (ortholog); CD4 receptor binding (ortholog); cytokine binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955415 4129151 4138336 + 102016470 AGCD01015967;AGCD01015968;GBDI01012603;XM_005380578;XM_005380579 XP_005380635;XP_005380636 MODEL 8719339 ncrna LOC102014084 uncharacterized LOC102014084 NW_004955437 20958744 20959376 - 102014084 AGCD01034893;GBDF01307365;XR_261899 MODEL 8987140 protein-coding Prkci protein kinase C iota ENCODES a protein that exhibits diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); phospholipid binding (ortholog); protein kinase activity (ortholog); INVOLVED IN actin filament organization (ortholog); cell migration (ortholog); cell-cell junction organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; interleukin-1 signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955420 423406 486676 + 102020013 AGCD01020544;GBDF01041815;XM_005382978 XP_005383035 MODEL 8881247 protein-coding LOC102010146 uncharacterized LOC102010146 NW_004955471 567077 785143 + 102010146 AGCD01052962;AGCD01052963;AGCD01052964;AGCD01052965;XM_013522863 XP_013378317 MODEL 8986116 pseudo LOC102010940 T-complex protein 1 subunit zeta-like NW_004955523 256492 260604 - 102010940 AGCD01068440 MODEL 8842898 pseudo LOC102004908 60S ribosomal protein L30 pseudogene NW_004955409 17443551 17444672 - 102004908 AGCD01009784 MODEL 8972003 protein-coding Loxl3 lysyl oxidase like 3 ENCODES a protein that exhibits fibronectin binding (ortholog); protein-lysine 6-oxidase activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); fibronectin fibril organization (ortholog); inflammatory response (ortholog); ASSOCIATED WITH cleft palate (ortholog); Disease Progression (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955424 11236415 11255801 + 102023930 AGCD01024559;GBDJ01390337;XM_005385492;XM_013514649;XM_013514650 XP_005385549;XP_013370103;XP_013370104 MODEL 9002419 protein-coding LOC102013723 zinc finger protein 883-like NW_004955483 674454 696184 - 102013723 AGCD01057627;GBCE01056094;XM_005403286;XM_005403289;XM_013503767;XM_013503768;XM_013503769;XM_013503770 XP_005403343;XP_005403346;XP_013359221;XP_013359222;XP_013359223;XP_013359224 MODEL 8715284 pseudo LOC102004542 zinc finger protein 14-like NW_004955607 5112 93169 + 102004542 AGCD01076967;AGCD01076968;AGCD01076969;AGCD01076970;AGCD01076971;AGCD01076972;AGCD01076973;AGCD01076974;XM_005414908 MODEL 8953706 protein-coding Clec11a C-type lectin domain containing 11A ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH anemia (ortholog); carotid stenosis (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955559 515341 517521 - 102015160 AGCD01073590;GBCE01000034;XM_005412772 XP_005412829 MODEL 8951135 protein-coding Socs4 suppressor of cytokine signaling 4 PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955409 8522540 8539551 - 102027617 AGCD01009420;GBDK01193050;XM_005376754 XP_005376811 MODEL 8763134 protein-coding Il1rn interleukin 1 receptor antagonist ENCODES a protein that exhibits interleukin-1 receptor antagonist activity (ortholog); interleukin-1 receptor binding (ortholog); interleukin-1 type I receptor antagonist activity (ortholog); INVOLVED IN acute-phase response (ortholog); carboxylic acid metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Abscess (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); vesicle (ortholog) NW_004955470 1145022 1159413 - 102020903 AGCD01052627;GBDJ01263056;XM_005400584;XM_005400585;XM_005400586;XM_013522846 XP_005400641;XP_005400642;XP_005400643;XP_013378300 MODEL 9035853 pseudo LOC102003114 40S ribosomal protein S2 pseudogene NW_004955469 9118926 9122699 - 102003114 AGCD01052491 MODEL 8940695 ncrna LOC102007466 uncharacterized LOC102007466 NW_004955532 2166348 2168036 + 102007466 AGCD01070222;GBDF01088883;XR_264727 MODEL 8713466 protein-coding Dmtf1 cyclin D binding myb like transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955621 50457 95460 - 102016546 AGCD01077372;AGCD01077373;GBDI01173819;XM_005415012;XM_013510153;XM_013510154;XM_013510155 XP_005415069;XP_013365607;XP_013365608;XP_013365609 MODEL 9037186 protein-coding Atxn7l1 ataxin 7 like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955410 10167196 10391362 - 102023446 AGCD01010793;AGCD01010794;GBDK01168953;XM_005377250;XM_005377251;XM_005377252;XM_005377253;XM_005377254;XM_005377255;XM_005377256;XM_005377257;XM_005377258;XM_005377259;XM_005377260;XM_005377261;XM_005377262;XM_013510529;XM_013510530;XM_013510531;XM_013510532;XM_013510533;XR_001232727 XP_005377307;XP_005377308;XP_005377309;XP_005377310;XP_005377311;XP_005377312;XP_005377313;XP_005377314;XP_005377315;XP_005377316;XP_005377317;XP_005377318;XP_005377319;XP_013365983;XP_013365984;XP_013365985;XP_013365986;XP_013365987 MODEL 8869583 protein-coding Cxcl11 C-X-C motif chemokine ligand 11 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR chemokine receptor binding (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemokine-mediated signaling pathway (ortholog); ASSOCIATED WITH bacterial pneumonia (ortholog); bronchiolitis obliterans (ortholog); celiac disease (ortholog); FOUND IN membrane (ortholog) NW_004955433 769449 771137 - 102012233 AGCD01031336;GBDJ01304389;XM_013516267 XP_013371721 MODEL 8755462 protein-coding Plk3 polo like kinase 3 ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955464 13419562 13424104 - 102006642 AGCD01050275;GBBH01135021;GBCE01163140;XM_013521627;XM_013521628 XP_013377081;XP_013377082 MODEL 9041803 ncrna LOC102012150 uncharacterized LOC102012150 NW_004955403 54885558 54890045 - 102012150 AGCD01003107;GBDF01110602;XR_259275 MODEL 8782463 protein-coding Sfxn3 sideroflexin 3 ENCODES a protein that exhibits L-serine transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial transmembrane transport (ortholog); one-carbon metabolic process (ortholog); serine import into mitochondrion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955485 9157657 9165243 - 102028972 AGCD01058748;AGCD01058749;GBBH01035640;GBBH01035644;XM_005403880 XP_005403937 MODEL 8751617 protein-coding LOC102004164 coiled-coil domain-containing protein 92 NW_004955481 559327 573930 + 102004164 AGCD01056795;AGCD01056796;AGCD01056797;XM_005402916 XP_005402973 MODEL 9019222 trna Trnal-cag transfer RNA leucine (anticodon CAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955433;NW_004955433;NW_004955462 363663;14941261;14940923;14719898 363745;14941343;14941005;14719980 -;-;+;+ 101978793 AGCD01031735;AGCD01049456;AGCD01057606 MODEL 8805762 protein-coding Ar androgen receptor ENCODES a protein that exhibits androgen binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); animal organ formation (ortholog); cellular response to estrogen stimulus (ortholog); PARTICIPATES IN altered androgen signaling pathway; androgen signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); alcohol dependence (ortholog); alopecia (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955475 7013960 7192473 + 102012423 AGCD01054992;AGCD01054993;AGCD01054994;AGCD01054995;AGCD01054996;GBCQ01091700;XM_005401581 XP_005401638 MODEL 8710706 pseudo LOC102018352 PEST proteolytic signal-containing nuclear protein pseudogene NW_004955597 71046 72218 - 102018352 AGCD01076536;XR_265145 MODEL 8987458 protein-coding LOC102005965 cytochrome b-c1 complex subunit 1, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); response to activity (ortholog); response to alkaloid (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955532 685315 691286 - 102005965 AGCD01070144;GBDF01007354;XM_013507657 XP_013363111 MODEL 39134205 misc_rna 7SK 7SK RNA 8755527 pseudo LOC102009751 pre-mRNA-splicing factor RBM22 pseudogene NW_004955434 8957904 8962702 + 102009751 AGCD01032281;AGCD01032282 MODEL 39132061 rrna 5S_rRNA 5S ribosomal RNA 39134197 misc_rna 7SK 7SK RNA 8814121 protein-coding LOC102004544 histone H3-like NW_004955403 18749690 18755615 - 102004544 AGCD01002110;GBDI01222345;XM_005373397 XP_005373454 MODEL 8946473 protein-coding Rccd1 RCC1 domain containing 1 ASSOCIATED WITH Breast Neoplasms (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955416 15013595 15020038 + 102013932 AGCD01017295;AGCD01017296;GBBH01229064;GBCQ01035929;XM_013512477 XP_013367931 MODEL 8769915 protein-coding Adap2 ArfGAP with dual PH domains 2 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN heart development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial envelope (ortholog); plasma membrane (ortholog) NW_004955481 7068217 7094946 + 102022817 AGCD01057052;AGCD01057053;GBCE01023889;GBDJ01233818;XM_013503464 XP_013358918 MODEL 8758783 ncrna LOC102007069 uncharacterized LOC102007069 NW_004955402 22117994 22162557 - 102007069 AGCD01000599;AGCD01000600;AGCD01000601;AGCD01000602;GBBH01029920;XR_259062 MODEL 8956479 protein-coding Cdnf cerebral dopamine neurotrophic factor ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN developmental process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955429 19586841 19592727 + 102007923 AGCD01028966;GBBH01185948;GBCB01003607;XM_013515373 XP_013370827 MODEL 8817328 ncrna LOC102011796 uncharacterized LOC102011796 NW_004955433 7192628 7234562 + 102011796 AGCD01031566;AGCD01031567;GBDF01254267;XR_001234703;XR_001234704;XR_261565 MODEL 8881983 protein-coding Fhod3 formin homology 2 domain containing 3 INVOLVED IN actin filament network formation (ortholog); cardiac myofibril assembly (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN sarcomere (ortholog); striated muscle thin filament (ortholog) NW_004955402 22822060 23277993 + 102011489 AGCD01000613;AGCD01000614;AGCD01000615;AGCD01000616;AGCD01000617;AGCD01000618;AGCD01000619;AGCD01000620;AGCD01000621;GBCQ01095975;XM_005372817;XM_005372818;XM_005372820;XM_005372821;XM_005372822;XM_005372823;XM_005372824;XM_013510258;XM_013510260 XP_005372874;XP_005372875;XP_005372877;XP_005372878;XP_005372879;XP_005372880;XP_005372881;XP_013365712;XP_013365714 MODEL 8944397 protein-coding Agrn agrin ENCODES a protein that exhibits acetylcholine receptor regulator activity (ortholog); ATPase inhibitor activity (ortholog); BMP binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN basement membrane; axonal growth cone (ortholog); cell surface (ortholog) NW_004955486 9674103 9704994 - 102029867 AGCD01059195;GBCQ01009261;GBDK01013959;XM_013504201 XP_013359655 MODEL 8830929 protein-coding Aloxe3 arachidonate epidermal lipoxygenase 3 ENCODES a protein that exhibits hydroperoxy icosatetraenoate dehydratase activity (ortholog); hydroperoxy icosatetraenoate isomerase activity (ortholog); intramolecular hydroxytransferase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); bicellular tight junction assembly (ortholog); ceramide biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog) NW_004955467 8844805 8869230 + 102025105 AGCD01051475;AGCD01051476;AGCD01051477;GBCC01051993;XM_005399436 XP_005399493 MODEL 8760775 protein-coding Cfap141 cilia and flagella associated protein 141 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955545 752737 754039 - 102022124 AGCD01071815;GBDI01117688;GBDJ01116113;XM_005411745 XP_005411802 MODEL 8962882 protein-coding LOC102022435 translation initiation factor IF-2-like NW_004955568 1247450 1253659 - 102022435 AGCD01074543;GBDF01071304;XM_013509329 XP_013364783 MODEL 9018986 protein-coding Epyc epiphycan INVOLVED IN articular cartilage development (ortholog); bone development (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955405 28182890 28212864 - 102018797 AGCD01005233;GBCE01000127;XM_005374447 XP_005374504 MODEL 8785612 protein-coding Wdr45 WD repeat domain 45 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Arachnodactyly (ortholog); astigmatism (ortholog); FOUND IN cytoplasm (ortholog); phagophore assembly site (ortholog) NW_004955543 597796 604163 - 102006712 AGCD01071593;GBDI01078234;XM_005411316;XM_005411317;XM_005411319;XM_013508149 XP_005411373;XP_005411374;XP_005411376;XP_013363603 MODEL 9004116 protein-coding Ano4 anoctamin 4 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 36350013 36715740 + 102023552 AGCD01005417;AGCD01005418;AGCD01005419;AGCD01005420;AGCD01005421;AGCD01005422;AGCD01005423;AGCD01005424;AGCD01005425;GBCE01103559;XM_005374542;XM_013518664 XP_005374599;XP_013374118 MODEL 8778396 protein-coding Rsad2 radical S-adenosyl methionine domain containing 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell activation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); defense response to virus (ortholog); ASSOCIATED WITH respiratory syncytial virus infectious disease; acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955487 1988226 2001731 - 102013727 AGCD01059256;GBDK01397678;XM_005404363 XP_005404420 MODEL 8897957 ncrna LOC102008217 uncharacterized LOC102008217 NW_004955474 7214695 7216543 - 102008217 AGCD01054516;GBDF01280192;XR_263600 MODEL 39131862 rrna 5S_rRNA 5S ribosomal RNA 9023590 protein-coding Aamp angio associated migratory cell protein ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN smooth muscle cell migration (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); melanoma (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955453 15104229 15109487 + 102014007 AGCD01044885;GBDF01047198;XM_005395659;XM_005395660 XP_005395716;XP_005395717 MODEL 8810267 protein-coding C1qtnf3 C1q and TNF related 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); glucose homeostasis (ortholog); intracellular triglyceride homeostasis (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955426 19588637 19606557 - 102028440 AGCD01026549;GBCB01010684;XM_005386168;XM_005386169 XP_005386225;XP_005386226 MODEL 8923833 protein-coding Ackr1 atypical chemokine receptor 1 (Duffy blood group) ENCODES a protein that exhibits C-C chemokine binding (ortholog); INVOLVED IN inflammatory response (ortholog); regulation of chemokine production (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Arteriovenous Fistula (ortholog); asthma (ortholog); FOUND IN G protein-coupled receptor complex (ortholog); plasma membrane (ortholog) NW_004955468 10994372 10997434 + 102004267 AGCD01052109;GBDF01130183;XM_005400165 XP_005400222 MODEL 39133937 misc_rna 7SK 7SK RNA 9013379 protein-coding LOC102013725 peroxisomal bifunctional enzyme NW_004955420 22306860 22353190 + 102013725 AGCD01021195;AGCD01021196;GBCE01020247;XM_005383302 XP_005383359 MODEL 8974637 protein-coding Bok BCL2 family apoptosis regulator BOK ENCODES a protein that exhibits BH domain binding (ortholog); protein dimerization activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular component disassembly involved in execution phase of apoptosis (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); hydrocephalus (ortholog); FOUND IN cis-Golgi network membrane (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) NW_004955542 224471 232401 - 102007278 AGCD01071464;GBCQ01010517;GBDI01072356;XM_005411124 XP_005411181 MODEL 8865727 pseudo LOC102013359 cryptochrome-1-like NW_004955402 23388755 23392703 + 102013359 AGCD01000622 MODEL 8799060 protein-coding Cd79a CD79a molecule ENCODES a protein that exhibits identical protein binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN B cell activation (ortholog); B cell differentiation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 3 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN B cell receptor complex (ortholog); external side of plasma membrane (ortholog); IgM B cell receptor complex (ortholog) NW_004955555 961522 965605 - 102008773 AGCD01073054;GBDI01002239;XM_005412414 XP_005412471 MODEL 8963158 pseudo LOC102004548 60S ribosomal protein L32 pseudogene NW_004957060 748 1529 + 102004548 AGCD01080456 MODEL 8916639 ncrna LOC102014085 uncharacterized LOC102014085 NW_004955438 12937928 12940523 - 102014085 AGCD01035276;GBDK01228462;XR_001235126;XR_261930 MODEL 9024007 pseudo LOC102008985 60S ribosomal protein L32 pseudogene NW_004955437 1108077 1108584 + 102008985 AGCD01034190 MODEL 9011802 protein-coding Il2 interleukin 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); cytokine activity (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN extracellular region (ortholog); interleukin-2 receptor complex (ortholog) NW_004955428 18163010 18168157 + 102015133 AGCD01028056;AGCD01028057;GBBH01190198;XM_005386770 XP_005386827 MODEL 8949353 ncrna LOC102011798 uncharacterized LOC102011798 NW_004955521 1606251 1622200 - 102011798 AGCD01068190;GBDF01280812;XR_001231893;XR_001231894 MODEL 8794937 protein-coding Slc35h1 solute carrier family 35 member H1 INVOLVED IN negative regulation of gene expression (ortholog); positive regulation of Notch signaling pathway (ortholog); protein O-linked glycosylation via fucose (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955445 10984675 10996707 + 102019861 AGCD01039680;GBDF01155404;XM_005392381;XM_005392383;XM_013518297;XM_013518298;XM_013518299;XM_013518300;XM_013518301;XM_013518302 XP_005392438;XP_005392440;XP_013373751;XP_013373752;XP_013373753;XP_013373754;XP_013373755;XP_013373756 MODEL 8927359 ncrna LOC102010941 uncharacterized LOC102010941 NW_004955435 16643784 16657404 - 102010941 AGCD01033336;GBDF01056722;XR_261709 MODEL 8877859 pseudo LOC102008588 tetratricopeptide repeat protein 14 pseudogene NW_004955402 62282155 62283653 - 102008588 AGCD01001640 MODEL 8832315 ncrna LOC102012151 uncharacterized LOC102012151 NW_004955452 12802984 12851810 - 102012151 AGCD01044366;AGCD01044367;GBDF01073900;XR_001236023;XR_001236024 MODEL 8796823 protein-coding Cxcl12 C-X-C motif chemokine ligand 12 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); CXCR chemokine receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); ameboidal-type cell migration (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; syndecan signaling pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955546 1929269 1941690 - 102011699 AGCD01072081;GBDI01001502;XM_005411777;XM_005411778 XP_005411834;XP_005411835 MODEL 9033409 protein-coding Atf7ip activating transcription factor 7 interacting protein ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); transcription coregulator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 11117369 11261787 + 102023996 AGCD01013952;AGCD01013953;AGCD01013954;AGCD01013955;AGCD01013956;GBCE01146003;XM_005378989;XM_005378990;XM_013511437;XM_013511438;XM_013511439;XM_013511440 XP_005379046;XP_005379047;XP_013366891;XP_013366892;XP_013366893;XP_013366894 MODEL 8818123 protein-coding LOC102018354 vomeronasal type-2 receptor 116-like NW_004955622 53461 73801 - 102018354 AGCD01077382;AGCD01077383;AGCD01077384;XM_005415017 XP_005415074 MODEL 8834479 protein-coding Cbx7 chromobox 7 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9me2/3 reader activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN developmental process involved in reproduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH anaplastic thyroid carcinoma (ortholog); B-cell lymphoma (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955413 25079627 25100039 - 102010792 AGCD01014395;GBBH01001308;GBDK01014246;XM_013511481 XP_013366935 MODEL 39132062 rrna 5S_rRNA 5S ribosomal RNA 39134198 misc_rna 7SK 7SK RNA 8732715 ncrna LOC102003115 uncharacterized LOC102003115 NW_004955470 2942258 2951897 + 102003115 AGCD01052684;AGCD01052685;AGCD01052686;GBDF01056049;XR_263459 MODEL 8721618 protein-coding Rce1 Ras converting CAAX endopeptidase 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); exopeptidase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); CAAX-box protein processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955422 18538251 18541322 - 102004171 AGCD01022951;GBCQ01101305;XM_005384377;XM_013513907;XM_013513908 XP_005384434;XP_013369361;XP_013369362 MODEL 8956478 pseudo LOC102007468 UMP-CMP kinase pseudogene NW_004955540 3132229 3136955 - 102007468 AGCD01071335 MODEL 8856685 protein-coding Prkcq protein kinase C theta ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cell chemotaxis (ortholog); intracellular signal transduction (ortholog); membrane protein ectodomain proteolysis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); immunological synapse (ortholog) NW_004955421 23072607 23151591 - 102005151 AGCD01022171;AGCD01022172;AGCD01022173;GBDI01221492;XM_005383869;XM_013513782 XP_005383926;XP_013369236 MODEL 9034290 protein-coding Agrp agouti related neuropeptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); receptor antagonist activity (ortholog); INVOLVED IN adult feeding behavior (ortholog); circadian rhythm (ortholog); eating behavior (ortholog); PARTICIPATES IN altered melanocortin system pathway; melanocortin system pathway; obesity pathway; ASSOCIATED WITH Hyperphagia (ortholog); obesity (ortholog); thymoma (ortholog); FOUND IN extracellular region (ortholog); Golgi lumen (ortholog); neuronal cell body (ortholog) NW_004955484 9165120 9166789 + 102030198 AGCD01058412;XM_005403647 XP_005403704 MODEL 8947534 protein-coding Dmtn dematin actin binding protein ENCODES a protein that exhibits actin binding (ortholog); signaling receptor binding (ortholog); spectrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN actin filament (ortholog); cell projection membrane (ortholog); cortical cytoskeleton (ortholog) NW_004955403 45566180 45579062 + 102015273 AGCD01002822;AGCD01002823;GBBH01142552;GBDF01262834;XM_005373902 XP_005373959 MODEL 15036851 trna Trnal-gag transfer RNA leucine (anticodon GAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978791 8845836 protein-coding Cd79b CD79b molecule ENCODES a protein that exhibits identical protein binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 6 (ortholog); FOUND IN B cell receptor complex (ortholog); external side of plasma membrane (ortholog); IgM B cell receptor complex (ortholog) NW_004955478 7909353 7912814 + 102018181 AGCD01055998;GBBH01064543;XM_005402178;XM_005402179 XP_005402235;XP_005402236 MODEL 8761709 protein-coding Sfxn5 sideroflexin 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); INVOLVED IN citrate transport (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955424 12545985 12659238 + 102020027 AGCD01024614;AGCD01024615;AGCD01024616;AGCD01024617;GBCE01013411;XM_005385576;XM_005385577;XM_005385578;XM_013514690 XP_005385633;XP_005385634;XP_005385635;XP_013370144 MODEL 8727280 protein-coding Loxl4 lysyl oxidase like 4 ENCODES a protein that exhibits protein-lysine 6-oxidase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955507 4229284 4260005 - 102004405 AGCD01065642;AGCD01065643;AGCD01065644;AGCD01065645;GBDI01328500;GBDK01396522;XM_013506211 XP_013361665 MODEL 8846315 pseudo LOC102005969 protein FAM204A pseudogene NW_004955438 15499120 15499834 + 102005969 AGCD01035370 MODEL 39134206 misc_rna 7SK 7SK RNA 8882916 protein-coding Clec12b C-type lectin domain family 12 member B ENCODES a protein that exhibits protein phosphatase binding (ortholog); signaling receptor inhibitor activity (ortholog); INVOLVED IN melanocyte proliferation (ortholog); natural killer cell inhibitory signaling pathway (ortholog); negative regulation of natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955413 7842994 7852685 + 102010143 AGCD01013834;GBDF01005000;XM_005378942;XM_005378943 XP_005378999;XP_005379000 MODEL 8823222 protein-coding LOC102008222 olfactory receptor 50-like NW_004955419 5484750 5485697 - 102008222 AGCD01019814;XM_005382529 XP_005382586 MODEL 8906125 protein-coding Rsbn1 round spermatid basic protein 1 ENCODES a protein that exhibits histone H4K20 demethylase activity (ortholog); INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955435 17028173 17081644 - 102029114 AGCD01033344;AGCD01033345;GBBH01201251;GBCQ01125658;XM_013516425;XM_013516427 XP_013371879;XP_013371881 MODEL 8871207 protein-coding LOC102009752 glutathione S-transferase Mu 2 NW_004955435 13200085 13206236 + 102009752 AGCD01033197;GBCQ01122645;XM_013516459;XM_013516460 XP_013371913;XP_013371914 MODEL 8892160 protein-coding LOC102010149 olfactory receptor 52K2-like NW_004955414 21881188 21882150 - 102010149 AGCD01015436;XM_013511736 XP_013367190 MODEL 9019987 protein-coding Socs5 suppressor of cytokine signaling 5 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cellular response to low-density lipoprotein particle stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955441 13593342 13657389 + 102014611 AGCD01037155;AGCD01037156;AGCD01037157;GBCB01059474;GBDJ01349288;XM_005390984 XP_005391041 MODEL 8768224 ncrna LOC102004911 uncharacterized LOC102004911 NW_004955462 11137547 11152480 + 102004911 AGCD01049385;AGCD01049386;GBDF01120647;XR_263127;XR_263128 MODEL 8867251 protein-coding Adar adenosine deaminase RNA specific ENCODES a protein that exhibits double-stranded RNA adenosine deaminase activity (ortholog); INVOLVED IN adenosine to inosine editing (ortholog); base conversion or substitution editing (ortholog); cellular response to virus (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 6 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) NW_004955545 1078319 1106938 - 102013119 AGCD01071836;AGCD01071837;GBCE01170194;XM_005411521;XM_005411522;XM_005411523;XM_005411524;XM_013508293 XP_005411578;XP_005411579;XP_005411580;XP_005411581;XP_013363747 MODEL 8754176 ncrna LOC102013726 uncharacterized LOC102013726 NW_004955486 6290723 6294087 - 102013726 AGCD01059117;GBBH01170469;XR_001231137 MODEL 8843135 pseudo LOC102013361 ras-related protein Rab-33B pseudogene NW_004955402 34608545 34611065 - 102013361 AGCD01000866 MODEL 8736602 protein-coding Bola1 bolA family member 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN iron-sulfur cluster assembly complex (ortholog); mitochondrion (ortholog) NW_004955413 850781 851887 - 102022579 AGCD01013491;GBCE01167501;XM_005378710 XP_005378767 MODEL 8753086 protein-coding Fibcd1 fibrinogen C domain containing 1 ENCODES a protein that exhibits chitin binding (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955513 810927 835106 - 102018210 AGCD01066832;XM_005408350;XM_013506563 XP_005408407;XP_013362017 MODEL 8876171 ncrna LOC102004166 uncharacterized LOC102004166 NW_004955420 12275770 12281651 + 102004166 AGCD01020858;GBDK01325905;XR_001233691;XR_260708 MODEL 8971751 protein-coding Araf A-Raf proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); protein phosphorylation (ortholog); regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) NW_004955516 521479 532980 - 102013202 AGCD01067385;GBBH01063423;XM_005408933;XM_013506911 XP_005408990;XP_013362365 MODEL 8998849 pseudo LOC102012152 UMP-CMP kinase-like NW_004955405 25714441 25715377 + 102012152 AGCD01005179 MODEL 8969247 protein-coding Wdr45b WD repeat domain 45B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); TSC1-TSC2 complex binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); lysosome (ortholog); phagophore assembly site (ortholog) NW_004955506 515364 556507 + 102006797 AGCD01065230;AGCD01065231;AGCD01065232;GBDF01081047;XM_005407188 XP_005407245 MODEL 8849789 protein-coding Ano5 anoctamin 5 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); plasma membrane repair (ortholog); ASSOCIATED WITH Ataxia (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955476 2705596 2777848 + 102009046 AGCD01055234;GBCB01020533;GBCB01020534;XM_013503010 XP_013358464 MODEL 39131864 rrna 5S_rRNA 5S ribosomal RNA 39133938 misc_rna 7SK 7SK RNA 8775972 protein-coding Aanat aralkylamine N-acetyltransferase ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); AP-3 adaptor complex binding (ortholog); aralkylamine N-acetyltransferase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); circadian rhythm (ortholog); melatonin biosynthetic process (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH advanced sleep phase syndrome (ortholog); esophageal cancer (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955506 5828666 5834812 - 102024363 AGCD01065390;GBCB01082756;XM_005407430;XM_013506018;XM_013506019;XM_013506020;XM_013506021 XP_005407487;XP_013361472;XP_013361473;XP_013361474;XP_013361475 MODEL 9034960 protein-coding Cbx8 chromobox 8 ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); single-stranded RNA binding (ortholog); ubiquitin-protein transferase activator activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); heterochromatin (ortholog) NW_004955506 3035510 3038204 + 102023503 AGCD01065307;GBDF01042358;XM_005407337 XP_005407394 MODEL 8952308 protein-coding Ackr2 atypical chemokine receptor 2 ENCODES a protein that exhibits C-C chemokine binding (ortholog); C-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955420 27990786 28020203 - 102019920 AGCD01021466;AGCD01021467;GBCQ01038701;XM_005383509;XM_005383510;XM_005383513;XM_005383517;XM_005383518;XM_005383520;XM_005383521;XM_005383522;XM_005383523;XM_005383524;XM_005383525;XM_005383526;XM_005383527;XM_013513597;XM_013513598;XM_013513599;XM_013513600;XM_013513601;XM_013513602 XP_005383566;XP_005383567;XP_005383570;XP_005383574;XP_005383575;XP_005383577;XP_005383578;XP_005383579;XP_005383580;XP_005383581;XP_005383582;XP_005383583;XP_005383584;XP_013369051;XP_013369052;XP_013369053;XP_013369054;XP_013369055;XP_013369056 MODEL 8830548 protein-coding C1qtnf4 C1q and TNF related 4 INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); gene expression (ortholog); inflammatory response (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 705165 709261 + 102006787 AGCD01022431;AGCD01022432;GBCE01179740;GBDK01218895;XM_013514050 XP_013369504 MODEL 9002739 protein-coding Atxn7l2 ataxin 7 like 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955435 12904829 12913351 + 102029551 AGCD01033174;GBBH01066741;GBDF01254358;XM_005388863;XM_013516428;XM_013516430;XM_013516431 XP_005388920;XP_013371882;XP_013371884;XP_013371885 MODEL 8777601 pseudo LOC102008986 transcription elongation factor A N-terminal and central domain-containing protein-like NW_004955438 5285314 5286378 - 102008986 AGCD01035064 MODEL 8776970 protein-coding Il20 interleukin 20 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-20 receptor binding (ortholog); interleukin-22 receptor binding (ortholog); INVOLVED IN positive regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); cervical cancer (ortholog); end stage renal disease (ortholog); FOUND IN extracellular region (ortholog); interleukin-20 receptor complex (ortholog) NW_004955406 42398510 42401561 + 102008495 AGCD01006706;XM_005375485 XP_005375542 MODEL 8859322 protein-coding LOC102011799 uncharacterized LOC102011799 NW_004955524 3971442 3983883 + 102011799 AGCD01068941;GBDK01315273;XM_005409534;XM_013507300;XM_013507301 XP_005409591;XP_013362754;XP_013362755 MODEL 8899522 protein-coding Eqtn equatorin INVOLVED IN acrosomal vesicle exocytosis (ortholog); endocytosis (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955472 7554243 7563620 + 102024109 AGCD01053624;GBDF01050220;XM_005401145 XP_005401202 MODEL 8763806 protein-coding Slc36a2 solute carrier family 36 member 2 ENCODES a protein that exhibits amino acid:proton symporter activity (ortholog); gamma-aminobutyric acid:proton symporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN amino acid export across plasma membrane (ortholog); glycine transport (ortholog); L-alanine transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hyperglycinuria (ortholog); iminoglycinuria (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) NW_004955408 2363416 2392210 + 102015694 AGCD01008006;GBCB01006475;XM_005376052;XM_005376053;XM_005376054;XM_005376055 XP_005376109;XP_005376110;XP_005376111;XP_005376112 MODEL 9040908 protein-coding Socs6 suppressor of cytokine signaling 6 INVOLVED IN intracellular glucose homeostasis (ortholog); negative regulation of T cell activation (ortholog); proteasomal protein catabolic process (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN immunological synapse (ortholog) NW_004955402 53847859 53876245 + 102005983 AGCD01001374;AGCD01001375;AGCD01001376;AGCD01001377;GBCB01073847;XM_005373056;XM_005373057 XP_005373113;XP_005373114 MODEL 8995786 ncrna LOC102013362 uncharacterized LOC102013362 NW_004955402 58255556 58259494 - 102013362 AGCD01001528;AGCD01001529;GBDF01117366;XR_259109 MODEL 8849926 protein-coding Agt angiotensinogen ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); aldosterone secretion (ortholog); angiotensin-activated signaling pathway (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; angiotensin II signaling pathway; angiotensin II signaling pathway via AT1 receptor; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Albuminuria (ortholog); alcoholic cardiomyopathy (ortholog); FOUND IN extracellular region (ortholog); mitochondrion (ortholog) NW_004955492 7863662 7874863 + 102012441 AGCD01060805;GBCQ01167112;XM_005404990 XP_005405047 MODEL 8778956 trna Trnal-uaa transfer RNA leucine (anticodon UAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465;NW_004955436;NW_004955465 13142581;16282643;13312190 13142663;16282725;13312272 -;-;- 101978788 AGCD01033911;AGCD01050590;AGCD01050597 MODEL 8745040 protein-coding Cxcl13 C-X-C motif chemokine ligand 13 ENCODES a protein that exhibits CCR10 chemokine receptor binding (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); B cell chemotaxis (ortholog); B cell chemotaxis across high endothelial venule (ortholog); ASSOCIATED WITH endometriosis (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955433 2123190 2129119 + 102017597 AGCD01031382;GBDF01093996;XM_005388194 XP_005388251 MODEL 8876350 pseudo LOC102007072 60S ribosomal protein L5-like NW_004955450 3079256 3080465 - 102007072 AGCD01042421 MODEL 9006521 protein-coding LOC102018356 large proline-rich protein BAG6-like NW_004955452 7679732 7684898 + 102018356 AGCD01044181;AGCD01044182;GBDI01323361;XM_005394959;XM_013519492 XP_005395016;XP_013374946 MODEL 8918126 protein-coding Lpar1 lysophosphatidic acid receptor 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); lysophosphatidic acid binding (ortholog); lysophosphatidic acid receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); bleb assembly (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell surface (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) NW_004955419 16190109 16324702 + 102011447 AGCD01020107;AGCD01020108;AGCD01020109;AGCD01020110;GBDF01015037;XM_005382726;XM_005382727;XM_005382729;XM_013513299 XP_005382783;XP_005382784;XP_005382786;XP_013368753 MODEL 8745804 protein-coding Cdo1 cysteine dioxygenase type 1 ENCODES a protein that exhibits cysteine dioxygenase activity (ortholog); ferrous iron binding (ortholog); nickel cation binding (ortholog); INVOLVED IN L-cysteine catabolic process (ortholog); lactation (ortholog); response to amino acid (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytosol (ortholog) NW_004955408 35593981 35605189 - 102024764 AGCD01008957;GBDK01266464;XM_005376528 XP_005376585 MODEL 8975509 ncrna LOC102014092 uncharacterized LOC102014092 NW_004955445 4863812 4869530 + 102014092 AGCD01039433;GBDF01276591;XR_262302 MODEL 39134199 misc_rna 7SK 7SK RNA 8933937 pseudo LOC102004550 ubiquitin-like protein FUBI pseudogene NW_004955403 20036621 20037044 + 102004550 AGCD01002152 MODEL 9053163 pseudo LOC102022436 60S ribosomal protein L9 pseudogene NW_004955445 2549893 2557067 - 102022436 AGCD01039357;AGCD01039358 MODEL 8782074 pseudo LOC102010150 high mobility group protein B1 pseudogene NW_004955415 3445227 3445862 + 102010150 AGCD01015938 MODEL 8860081 protein-coding Rchy1 ring finger and CHY zinc finger domain containing 1 ENCODES a protein that exhibits p53 binding (ortholog); protein homodimerization activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein autoubiquitination (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955474 1463817 1475677 - 102009275 AGCD01054255;GBCB01021660;GBCE01097442;XM_013502758 XP_013358212 MODEL 8837390 protein-coding Plk4 polo like kinase 4 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN centriole replication (ortholog); cilium assembly (ortholog); de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); breast ductal carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cleavage furrow (ortholog) NW_004955428 13548485 13566786 - 102005492 AGCD01027958;AGCD01027959;GBDF01044579;XM_005386739 XP_005386796 MODEL 8843290 protein-coding Cfap144 cilia and flagella associated protein 144 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); centrosome (ortholog) NW_004955418 29605614 29609806 + 102017660 AGCD01019474;GBDJ01002078;XM_005382326 XP_005382383 MODEL 8739743 protein-coding Prkcsh PRKCSH beta subunit of glucosidase II ENCODES a protein that exhibits calcium ion binding (ortholog); phosphoprotein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); liver development (ortholog); N-glycan processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); glucosidase II complex (ortholog) NW_004955495 2331075 2338479 + 102023373 AGCD01061767;GBCQ01000664;XM_005405665;XM_013505112 XP_005405722;XP_013360566 MODEL 9057000 pseudo LOC102010942 2-hydroxyacylsphingosine 1-beta-galactosyltransferase pseudogene NW_004955526 532505 539029 - 102010942 AGCD01069240 MODEL 8721763 protein-coding LOC102008589 protein FAM170A-like NW_004955644 8842 16020 + 102008589 AGCD01077727;GBDF01075273;XM_005415048;XM_005415049 XP_005415105;XP_005415106 MODEL 8716128 ncrna LOC102008990 uncharacterized LOC102008990 NW_004955549 117973 173721 + 102008990 AGCD01072419;GBDF01076042;XR_001232252;XR_264912 MODEL 8726326 protein-coding Bola2b bolA family member 2B INVOLVED IN [2Fe-2S] cluster assembly (ortholog); cell redox homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); FOUND IN cytoplasm (ortholog); iron-sulfur cluster assembly complex (ortholog); nucleus (ortholog) NW_004955493 6812208 6812932 + 102020575 AGCD01061141;GBDF01002632;XM_005405183 XP_005405240 MODEL 9038836 protein-coding LOC102004169 cell cycle control protein 50A NW_004955488 8014892 8049217 - 102004169 AGCD01059700;GBCB01006663;XM_013504427 XP_013359881 MODEL 8897146 protein-coding Atf7ip2 activating transcription factor 7 interacting protein 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955442 7896626 7975579 - 102010202 AGCD01037629;AGCD01037630;AGCD01037631;AGCD01037632;AGCD01037633;AGCD01037634;GBDJ01075670;XM_005391191;XM_005391192;XM_005391193;XM_005391194;XM_005391195;XM_013518012;XM_013518013 XP_005391248;XP_005391249;XP_005391250;XP_005391251;XP_005391252;XP_013373466;XP_013373467 MODEL 8935616 protein-coding LOC102005976 sialic acid-binding Ig-like lectin 10 NW_004955558 999418 1002833 + 102005976 AGCD01073409;AGCD01073410;GBDI01356195;GBDJ01063531;XM_013508839 XP_013364293 MODEL 39134207 misc_rna 7SK 7SK RNA 39132063 rrna 5S_rRNA 5S ribosomal RNA 8891143 pseudo LOC102008226 voltage-dependent anion-selective channel protein 1-like NW_004955419 25137127 25158946 + 102008226 AGCD01020373;AGCD01020374 MODEL 9028114 protein-coding Ano6 anoctamin 6 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); identical protein binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); bleb assembly (ortholog); blood coagulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosing spondylitis (ortholog); colon adenocarcinoma (ortholog); FOUND IN chloride channel complex (ortholog); cholinergic synapse (ortholog); plasma membrane (ortholog) NW_004955500 4462314 4652634 + 102008642 AGCD01063796;AGCD01063797;AGCD01063798;AGCD01063799;AGCD01063800;AGCD01063801;AGCD01063802;AGCD01063803;AGCD01063804;AGCD01063805;GBDK01110938;XM_005406593;XM_013505696;XM_013505697;XM_013505698;XM_013505699 XP_005406650;XP_013361150;XP_013361151;XP_013361152;XP_013361153 MODEL 8819579 protein-coding Rsbn1l round spermatid basic protein 1 like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog) NW_004955410 7453868 7528509 - 102010878 AGCD01010716;AGCD01010717;AGCD01010718;GBBH01186809;GBDF01262717;XM_005377211 XP_005377268 MODEL 9024278 protein-coding Alpk1 alpha kinase 1 ENCODES a protein that exhibits monosaccharide binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); innate immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955457 14325278 14444368 - 102019777 AGCD01047071;AGCD01047072;GBDF01014659;GBDJ01164744;XM_005397100;XM_013520771;XM_013520772 XP_005397157;XP_013376225;XP_013376226 MODEL 8860006 ncrna LOC102007469 uncharacterized LOC102007469 NW_004955439 19369735 19412284 - 102007469 AGCD01036083;GBDF01112984;XR_001235205;XR_261997 MODEL 8985340 pseudo LOC102004912 wee1-like protein kinase 2 pseudogene NW_004955463 3267194 3269457 - 102004912 AGCD01049579 MODEL 8868000 pseudo LOC102013730 UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like NW_004955493 1759541 1760151 - 102013730 AGCD01060904 MODEL 9019696 protein-coding Aar2 AAR2 splicing factor PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); Developmental Disabilities (ortholog); microcephaly (ortholog) NW_004955422 25306056 25335572 - 102027198 AGCD01023248;GBDF01032600;XM_005384752;XM_013514311 XP_005384809;XP_013369765 MODEL 8995558 protein-coding C1qtnf5 C1q and TNF related 5 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor inhibitor activity (ortholog); INVOLVED IN inner ear development (ortholog); protein secretion (ortholog); ASSOCIATED WITH isolated microphthalmia 5 (ortholog); late-onset retinal degeneration (ortholog); lens disease (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); extracellular region (ortholog) NW_004955412 20419754 20421541 - 102006558 AGCD01013008;GBDI01171673;XM_005378334 XP_005378391 MODEL 8744929 protein-coding Fibin fin bud initiation factor homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955476 6325492 6327075 + 102014775 AGCD01055328;GBDK01432398;XM_005401745 XP_005401802 MODEL 8754136 protein-coding Sgca sarcoglycan alpha INVOLVED IN response to denervation involved in regulation of muscle adaptation (ortholog); skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); FOUND IN cell-cell junction (ortholog); dystroglycan complex (ortholog); membrane raft (ortholog) NW_004955451 11490891 11501618 - 102012394 AGCD01043355;AGCD01043356;GBCQ01015636;GBDI01122074;XM_013519105 XP_013374559 MODEL 8915486 pseudo LOC102012157 signal peptidase complex catalytic subunit SEC11A pseudogene NW_004955406 365288 365823 - 102012157 AGCD01005615 MODEL 8787836 protein-coding LOC102011800 arrestin domain-containing protein 2 NW_004955524 3316609 3321314 - 102011800 AGCD01068880;AGCD01068881;GBCB01002759;GBDI01131111;XM_013507270 XP_013362724 MODEL 9012361 trna Trnal-uag transfer RNA leucine (anticodon UAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955467;NW_004955550 8841723;1420231 8841804;1420312 +;+ 101978792 AGCD01051475;AGCD01072566 MODEL 8835364 protein-coding Alpk2 alpha kinase 2 INVOLVED IN cardiac muscle cell development (ortholog); epicardium morphogenesis (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955402 42749005 42871756 - 102010536 AGCD01001045;AGCD01001046;AGCD01001047;AGCD01001048;AGCD01001049;AGCD01001050;GBCB01023001;XM_005372989;XM_013511022;XM_013511023 XP_005373046;XP_013366476;XP_013366477 MODEL 8984861 protein-coding Clec14a C-type lectin domain containing 14A ENCODES a protein that exhibits extracellular matrix protein binding (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); lymphangiogenesis (ortholog); sprouting angiogenesis (ortholog); FOUND IN endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955409 22819530 22823306 + 102017749 AGCD01010046;GBDK01089985;XM_005376891 XP_005376948 MODEL 8775375 protein-coding Eral1 Era like 12S mitochondrial rRNA chaperone 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); RNA folding chaperone (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial small ribosomal subunit assembly (ortholog); ribosomal small subunit assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955481 4315139 4320983 - 102019803 AGCD01056933;AGCD01056934;GBCE01115661;XM_005402709;XM_013503383 XP_005402766;XP_013358837 MODEL 9001508 pseudo LOC102009753 ADP-ribosylation factor-like protein 15 pseudogene NW_004955436 1336836 1341038 - 102009753 AGCD01033575 MODEL 8852543 ncrna LOC102007073 uncharacterized LOC102007073 NW_004955450 13276074 13290515 - 102007073 AGCD01042733;GBDF01306692;XR_262551;XR_262552 MODEL 39131865 rrna 5S_rRNA 5S ribosomal RNA 39133939 misc_rna 7SK 7SK RNA 9015513 protein-coding LOC102003117 olfactory receptor 51B6-like NW_004955414 21261870 21262817 + 102003117 AGCD01015411;XM_005380081 XP_005380138 MODEL 8807737 protein-coding Cby1 chibby 1, beta catenin antagonist ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cilium assembly (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955413 24781102 24794537 + 102021544 AGCD01014379;GBBH01092384;XM_005379264;XM_005379265;XM_005379266;XR_260106 XP_005379321;XP_005379322;XP_005379323 MODEL 8945726 protein-coding Adarb1 adenosine deaminase RNA specific B1 ENCODES a protein that exhibits adenosine deaminase activity (ortholog); double-stranded RNA adenosine deaminase activity (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN adenosine to inosine editing (ortholog); base conversion or substitution editing (ortholog); facial nerve morphogenesis (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); brain disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 41886286 41962846 + 102011737 AGCD01007884;GBCE01116963;GBDK01358973;XM_005375908 XP_005375965 MODEL 9059726 protein-coding Cdon cell adhesion associated, oncogene regulated ENCODES a protein that exhibits coreceptor activity (ortholog); protein carrier activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cell adhesion (ortholog); cell fate specification (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); coloboma (ortholog); FOUND IN cell surface (ortholog) NW_004955412 27004391 27093968 - 102027960 AGCD01013225;AGCD01013226;AGCD01013227;GBDJ01063207;XM_005378484;XM_013511115;XM_013511116;XM_013511117;XM_013511118;XM_013511119;XM_013511120;XR_001232897;XR_001232898 XP_005378541;XP_013366569;XP_013366570;XP_013366571;XP_013366572;XP_013366573;XP_013366574 MODEL 8936476 protein-coding Dmwd DM1 locus, WD repeat containing ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); peptidase complex (ortholog) NW_004955574 237616 244207 - 102019970 AGCD01075093;GBCE01076103;GBDF01010547;XM_013509517 XP_013364971 MODEL 8800511 protein-coding Atxn7l3 ataxin 7 like 3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN DUBm complex (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955451 17280659 17286140 - 102010659 AGCD01043735;GBDJ01004931;GBDK01417543;XM_005394524;XM_013519365;XM_013519366;XM_013519367;XM_013519368 XP_005394581;XP_013374819;XP_013374820;XP_013374821;XP_013374822 MODEL 8990640 pseudo LOC102004551 small nuclear ribonucleoprotein-associated protein B pseudogene NW_004955451 1697358 1700887 - 102004551 AGCD01042977;AGCD01042978 MODEL 8749902 protein-coding LOC102022437 uncharacterized LOC102022437 NW_004955570 295803 309942 - 102022437 AGCD01074720;AGCD01074721;AGCD01081655;GBDF01079306;XM_013509380 XP_013364834 MODEL 8826103 protein-coding Il20ra interleukin 20 receptor subunit alpha ENCODES a protein that exhibits interleukin-20 binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-19-mediated signaling pathway (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955436 22281422 22323242 + 102020707 AGCD01034089;AGCD01034090;AGCD01034091;AGCD01034092;AGCD01034093;GBBH01193661;XM_005389282;XM_005389283;XM_005389284;XM_013516702 XP_005389339;XP_005389340;XP_005389341;XP_013372156 MODEL 8744987 protein-coding Slc36a3 solute carrier family 36 member 3 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); melanoma (ortholog); stomach cancer (ortholog) NW_004955408 2395045 2423797 + 102016670 AGCD01008006;GBDF01155539;XM_005376056 XP_005376113 MODEL 8860728 protein-coding LOC102008590 protocadherin gamma-B7-like NW_004957438 6 1466 - 102008590 AGCD01080834;GBCB01007960;XM_005415231 XP_005415288 MODEL 8888168 protein-coding LOC102013363 ubiquinol-cytochrome-c reductase complex assembly factor 3 ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cristae formation (ortholog); mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 9 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955599 540598 541643 - 102013363 AGCD01076657;GBCE01052198;XM_005414784 XP_005414841 MODEL 8770172 protein-coding Wdr46 WD repeat domain 46 INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955437 1840875 1848258 - 102030345 AGCD01034239;GBDF01087150;XM_013516886 XP_013372340 MODEL 9010354 protein-coding Cxcl14 C-X-C motif chemokine ligand 14 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); inner ear development (ortholog); negative regulation of myoblast differentiation (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955408 30733079 30740854 - 102009914 AGCD01008815;GBCE01002150;XM_005376477 XP_005376534 MODEL 8808669 protein-coding Agtpbp1 ATP/GTP binding carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Childhood-Onset Neurodegeneration with Cerebellar Atrophy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955432 1628966 1816373 + 102027328 AGCD01030602;AGCD01030603;AGCD01030604;AGCD01030605;AGCD01030606;GBDF01035729;XM_005387927;XM_005387928;XM_005387929;XM_005387930;XM_013516036;XM_013516037;XR_261503 XP_005387984;XP_005387985;XP_005387986;XP_005387987;XP_013371490;XP_013371491 MODEL 8746468 protein-coding LOC102018360 maestro heat-like repeat family member 5 NW_004955454 1331678 1366820 - 102018360 AGCD01044968;GBDI01324363;XM_013520086;XM_013520087;XM_013520088;XM_013520089;XM_013520090 XP_013375540;XP_013375541;XP_013375542;XP_013375543;XP_013375544 MODEL 8783559 ncrna LOC102012158 uncharacterized LOC102012158 NW_004955407 18483756 18702374 - 102012158 AGCD01007271;AGCD01007272;AGCD01007273;AGCD01007274;AGCD01007275;GBDF01046486;XR_001231621;XR_001231624;XR_001231625;XR_001231626;XR_001231627;XR_001231628;XR_259571 MODEL 9044251 protein-coding LOC102005977 interleukin-6-like NW_004955443 14546872 14547379 + 102005977 AGCD01038517;XM_005392049 XP_005392106 MODEL 39134072 misc_rna 7SK 7SK RNA 8967483 protein-coding Atg10 autophagy related 10 ENCODES a protein that exhibits Atg12 conjugating enzyme activity (ortholog); Atg12 transferase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); ER overload response (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog) NW_004955418 28118843 28368358 - 102012096 AGCD01019428;AGCD01019429;AGCD01019430;AGCD01019431;AGCD01019432;AGCD01019433;AGCD01019434;AGCD01019435;GBDJ01128461;XM_013513063;XM_013513064;XM_013513065;XM_013513066 XP_013368517;XP_013368518;XP_013368519;XP_013368520 MODEL 8775930 protein-coding Cd80 CD80 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of T cell mediated immunity (ortholog); positive regulation of alpha-beta T cell proliferation (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); anti-basement membrane glomerulonephritis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955427 19237251 19274001 - 102019298 AGCD01027362;AGCD01027363;GBDK01125073;XM_005386449;XM_013515216 XP_005386506;XP_013370670 MODEL 9016217 protein-coding Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); type 1 angiotensin receptor binding (ortholog); INVOLVED IN negative regulation of stress fiber assembly (ortholog); photoreceptor cell maintenance (ortholog); positive regulation of filopodium assembly (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); extrinsic component of plasma membrane (ortholog) NW_004955414 18667108 18726259 + 102020792 AGCD01015286;GBCQ01122216;XM_005379969;XM_005379970;XM_005379972;XM_005379973;XM_005379975;XM_005379977;XM_005379979;XM_013511970 XP_005380026;XP_005380027;XP_005380029;XP_005380030;XP_005380032;XP_005380034;XP_005380036;XP_013367424 MODEL 8957970 protein-coding LOC102010953 olfactory receptor 5-like NW_004955567 192924 193868 - 102010953 AGCD01074386;XM_005413283 XP_005413340 MODEL 8976850 ncrna LOC102008991 uncharacterized LOC102008991 NW_004955551 215613 228844 - 102008991 AGCD01072651;GBDF01122997;XR_001232270;XR_001232271;XR_001232272;XR_001232273 MODEL 8958893 protein-coding Cfap157 cilia and flagella associated protein 157 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN sperm axoneme assembly (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955419 942147 950968 - 102027411 AGCD01019624;AGCD01019625;GBBH01165801;XM_005382414;XM_005382415;XM_005382416 XP_005382471;XP_005382472;XP_005382473 MODEL 8849840 protein-coding Prkcz protein kinase C zeta ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); cell migration (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; angiotensin II signaling pathway; ceramide signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); Cardiomegaly (ortholog); FOUND IN anchoring junction (ortholog); apical cortex (ortholog); apical plasma membrane (ortholog) NW_004955486 8947579 9021702 - 102009845 AGCD01059158;GBBH01064694;GBCE01055776;XM_005404177;XM_013504279 XP_005404234;XP_013359733 MODEL 8965918 protein-coding Cdpf1 cysteine rich DPF motif domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955413 30366346 30372210 - 102009270 AGCD01014608;GBDF01124426;XM_005379502;XM_013511381;XM_013511382;XM_013511383;XM_013511384;XM_013511385 XP_005379559;XP_013366835;XP_013366836;XP_013366837;XP_013366838;XP_013366839 MODEL 8897070 protein-coding Bola3 bolA family member 3 INVOLVED IN adaptive thermogenesis (ortholog); energy homeostasis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); multiple mitochondrial dysfunctions syndrome 2 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN iron-sulfur cluster assembly complex (ortholog); mitochondrion (ortholog) NW_004955424 11583508 11590626 + 102005818 AGCD01024571;GBCB01006087;GBCE01055358;XM_005385527 XP_005385584 MODEL 8945576 protein-coding LOC102004170 olfactory receptor 6B1 NW_004955491 349180 350455 + 102004170 AGCD01060331;GBBH01225832;XM_005404722 XP_005404779 MODEL 8871222 protein-coding Sgcb sarcoglycan beta INVOLVED IN cardiac muscle cell development (ortholog); gene expression (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2E (ortholog); cardiomyopathy (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) NW_004955447 18459562 18472367 + 102011377 AGCD01041174;AGCD01041175;GBDJ01180305;GBDK01317787;XM_013518513 XP_013373967 MODEL 39132064 rrna 5S_rRNA 5S ribosomal RNA 8748236 pseudo LOC102011808 THO complex subunit 5 homolog pseudogene NW_004955540 390461 391906 + 102011808 AGCD01071274 MODEL 9006420 protein-coding Lpar2 lysophosphatidic acid receptor 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of Rho protein signal transduction (ortholog); FOUND IN cell surface (ortholog); endocytic vesicle (ortholog); glutamatergic synapse (ortholog) NW_004955524 2390354 2395436 + 102015142 AGCD01068814;AGCD01068815;AGCD01068816;GBCQ01014829;XM_005409641 XP_005409698 MODEL 8825637 protein-coding LOC102008228 chemokine XC receptor 1-like NW_004955420 26003029 26017172 + 102008228 AGCD01021384;AGCD01021385;AGCD01021386;AGCD01021387;AGCD01021388;GBDK01289511;XM_013513345 XP_013368799 MODEL 8940705 protein-coding LOC102009755 pre-mRNA-processing factor 6 NW_004955528 243869 278279 - 102009755 AGCD01069519;AGCD01069520;AGCD01069521;AGCD01069522;AGCD01069523;GBCQ01156965;XM_013507476;XM_013507477;XM_013507478;XM_013507479;XM_013507480;XM_013507481 XP_013362930;XP_013362931;XP_013362932;XP_013362933;XP_013362934;XP_013362935 MODEL 8746877 protein-coding Ano8 anoctamin 8 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955524 903750 912827 + 102008024 AGCD01068725;GBDI01261021;XM_005409528;XM_013507240 XP_005409585;XP_013362694 MODEL 39131866 rrna 5S_rRNA 5S ribosomal RNA 8862260 protein-coding Erap1 endoplasmic reticulum aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); endopeptidase activity (ortholog); interleukin-6 receptor binding (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); membrane protein ectodomain proteolysis (ortholog); positive regulation of angiogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosing spondylitis (ortholog); Behcet's disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955418 15827560 15859720 + 102010260 AGCD01019112;AGCD01019113;GBCB01073859;GBCQ01099077;XM_013513048 XP_013368502 MODEL 8894395 ncrna LOC102004913 uncharacterized LOC102004913 NW_004955411 7852711 7855811 - 102004913 AGCD01011712;GBDF01042682;XR_259927 MODEL 8896374 protein-coding LOC102007471 very-long-chain 3-oxoacyl-CoA reductase-B-like NW_004955555 2234031 2248419 + 102007471 AGCD01073138;AGCD01073139;AGCD01073140;GBDF01155567;XM_005412503 XP_005412560 MODEL 8811311 protein-coding LOC102013734 interferon-induced guanylate-binding protein 1-like NW_004955423 5149254 5165228 + 102013734 AGCD01023556;GBBH01003827;XM_005385104 XP_005385161 MODEL 8792398 protein-coding C1qtnf6 C1q and TNF related 6 ENCODES a protein that exhibits identical protein binding (ortholog); pattern recognition receptor activity (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog); myocardial infarction (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); protein-containing complex (ortholog) NW_004955413 23661788 23669793 - 102008523 AGCD01014333;GBDK01025155;XM_013511301 XP_013366755 MODEL 8996816 protein-coding Fibp FGF1 intracellular binding protein ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN platelet aggregation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN membrane (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955422 19435528 19440095 + 102025589 AGCD01023006;GBDF01048191;XM_005384449;XM_005384450;XM_005384451 XP_005384506;XP_005384507;XP_005384508 MODEL 8884781 protein-coding Socs7 suppressor of cytokine signaling 7 ENCODES a protein that exhibits phosphorylation-dependent protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cerebral cortex radially oriented cell migration (ortholog); fat cell differentiation (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH lung squamous cell carcinoma (ortholog); ovarian carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955451 13567377 13595685 + 102017528 AGCD01043490;GBBH01037090;GBDF01007859;XM_013519430 XP_013374884 MODEL 8736082 protein-coding Rcl1 RNA terminal phosphate cyclase like 1 INVOLVED IN endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955434 9073643 9137387 + 102028569 AGCD01032288;AGCD01032289;AGCD01032290;AGCD01032291;GBBH01052005;XM_005388652 XP_005388709 MODEL 39134208 misc_rna 7SK 7SK RNA 8700856 protein-coding Aars1 alanyl-tRNA synthetase 1 ENCODES a protein that exhibits alanine-tRNA ligase activity (ortholog); amino acid binding (ortholog); aminoacyl-tRNA deacylase activity (ortholog); INVOLVED IN alanyl-tRNA aminoacylation (ortholog); cerebellar Purkinje cell layer development (ortholog); negative regulation of neuron apoptotic process (ortholog); PARTICIPATES IN alanine metabolic pathway; lactic acidosis pathway; primary hyperoxaluria type 1 pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955484 3090678 3115224 - 102028968 AGCD01058154;GBCE01054191;XM_005403471;XM_013503929 XP_005403528;XP_013359383 MODEL 8771272 protein-coding Ackr3 atypical chemokine receptor 3 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); early endosome (ortholog) NW_004955453 195346 218034 - 102025429 AGCD01044586;AGCD01044587;AGCD01044588;GBCE01032564;XM_005395313 XP_005395370 MODEL 8942349 protein-coding LOC102014103 cytochrome P450 2B5-like NW_004955813 9300 18593 - 102014103 AGCD01078398;AGCD01078399;AGCD01078400;XM_005415120;XM_005415121 XP_005415177;XP_005415178 MODEL 8907865 protein-coding Wdr47 WD repeat domain 47 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior commissure morphogenesis (ortholog); autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955435 12414964 12479883 - 102022322 AGCD01033147;AGCD01033148;GBDI01324335;XM_005388841;XM_013516532;XM_013516533;XM_013516534;XM_013516535;XM_013516536 XP_005388898;XP_013371986;XP_013371987;XP_013371988;XP_013371989;XP_013371990 MODEL 8740934 ncrna LOC102010158 uncharacterized LOC102010158 NW_004955417 26308543 26333124 + 102010158 AGCD01018505;GBBH01097094;XR_001233384;XR_001233385 MODEL 9052505 protein-coding Clec16a C-type lectin domain containing 16A INVOLVED IN cellular response to starvation (ortholog); mitophagy (ortholog); negative regulation of autophagosome maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Addison's disease (ortholog); allergic rhinitis (ortholog); FOUND IN cytosol (ortholog); endolysosome membrane (ortholog); endosome membrane (ortholog) NW_004955442 7369616 7584052 - 102003698 AGCD01037624;AGCD01037625;GBBH01207669;XM_005391170;XM_005391173;XM_013517851;XM_013517852;XM_013517853;XM_013517854;XM_013517855;XM_013517856 XP_005391227;XP_005391230;XP_013373305;XP_013373306;XP_013373307;XP_013373308;XP_013373309;XP_013373310 MODEL 39133940 misc_rna 7SK 7SK RNA 8838696 protein-coding Lpar3 lysophosphatidic acid receptor 3 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); phospholipid binding (ortholog); INVOLVED IN bleb assembly (ortholog); G protein-coupled receptor signaling pathway (ortholog); gene expression (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axon (ortholog); plasma membrane (ortholog) NW_004955423 9063804 9133203 + 102028433 AGCD01023651;AGCD01023652;AGCD01023653;GBBH01077389;XM_005385152;XM_013514355 XP_005385209;XP_013369809 MODEL 39134073 misc_rna 7SK 7SK RNA 10308939 protein-coding Rsc1a1 regulator of solute carriers 1 ENCODES a protein that exhibits sodium channel inhibitor activity (ortholog); INVOLVED IN intestinal absorption (ortholog); negative regulation of D-glucose transmembrane transport (ortholog); negative regulation of Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN brush border (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955527 2492904 2495318 - 106147202 AGCD01069439;GBCQ01176464;XM_013507398 XP_013362852 MODEL 8973069 protein-coding Adarb2 adenosine deaminase RNA specific B2 (inactive) ENCODES a protein that exhibits double-stranded RNA adenosine deaminase activity (ortholog); mRNA binding (ortholog); RNA sequestering activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); negative regulation of mRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 29705289 30028013 + 102011777 AGCD01022363;AGCD01022364;AGCD01022365;AGCD01022366;AGCD01022367;AGCD01022368;AGCD01022369;AGCD01022370;AGCD01022371;AGCD01022372;AGCD01022373;AGCD01022374;AGCD01022375;AGCD01022376;AGCD01022377;XM_013513649 XP_013369103 MODEL 8782493 protein-coding Plk5 polo like kinase 5 (inactive) ENCODES a protein that exhibits kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); defense response to tumor cell (ortholog); DNA damage response (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) NW_004955495 6415172 6424445 - 102028985 AGCD01062081;GBDJ01030988;XM_005405960;XM_013505279;XM_013505280;XM_013505281;XM_013505282;XM_013505283;XM_013505284;XM_013505285;XM_013505286;XM_013505287;XM_013505288;XM_013505289;XM_013505290 XP_005406017;XP_013360733;XP_013360734;XP_013360735;XP_013360736;XP_013360737;XP_013360738;XP_013360739;XP_013360740;XP_013360741;XP_013360742;XP_013360743;XP_013360744 MODEL 9059923 pseudo LOC102004556 chromatin target of PRMT1 protein pseudogene NW_004955454 5724497 5725303 + 102004556 AGCD01045185 MODEL 8783834 pseudo LOC102022438 nucleolar protein of 40 kDa pseudogene NW_004955446 12790960 12791995 + 102022438 AGCD01040243 MODEL 8762574 protein-coding Dmxl1 Dmx like 1 INVOLVED IN proton-transporting V-type ATPase complex assembly (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955408 38705489 38850770 + 102030283 AGCD01009052;AGCD01009053;GBCE01171850;XM_005376544;XM_013506996;XM_013507007 XP_005376601;XP_013362450;XP_013362461 MODEL 8856829 protein-coding Cd81 CD81 molecule ENCODES a protein that exhibits cholesterol binding (ortholog); integrin binding (ortholog); MHC class II protein binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell costimulation (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH common variable immunodeficiency (ortholog); common variable immunodeficiency 6 (ortholog); hepatitis C (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955422 14155682 14175181 + 102009393 AGCD01022855;GBDK01013018;XM_005384204 XP_005384261 MODEL 8881152 protein-coding LOC102008593 cholesterol 7-alpha-monooxygenase ENCODES a protein that exhibits 24S-hydroxycholesterol 7-alpha-hydroxylase activity (ortholog); cholesterol 7-alpha-monooxygenase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); cellular response to cholesterol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); autism spectrum disorder (ortholog); cholestasis (ortholog) NW_004955454 17035105 17078854 - 102008593 AGCD01045541;AGCD01045542;AGCD01045543;AGCD01045544;GBBH01001699;GBCQ01008759;XM_013520108 XP_013375562 MODEL 9006013 trna Trnam-cau transfer RNA methionine (anticodon CAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978797 AGCD01050592;AGCD01050595;AGCD01050596;AGCD01050607;AGCD01050636;AGCD01057602;AGCD01057629;AGCD01057630;AGCD01071784 MODEL 8712852 protein-coding Adat1 adenosine deaminase tRNA specific 1 ENCODES a protein that exhibits RNA binding (ortholog); tRNA-specific adenosine deaminase activity (ortholog); INVOLVED IN tRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955484 1942868 1964901 + 102017878 AGCD01058073;GBDI01263685;XM_013504003;XM_013504004;XM_013504005;XM_013504006;XM_013504007;XM_013504008 XP_013359457;XP_013359458;XP_013359459;XP_013359460;XP_013359461;XP_013359462 MODEL 8863249 protein-coding Alpk3 alpha kinase 3 INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiac arrest (ortholog); FOUND IN nucleus (ortholog) NW_004955416 14279831 14322836 - 102010256 AGCD01017249;AGCD01017250;AGCD01017251;AGCD01017252;AGCD01017253;GBCB01004832;XM_005381489;XM_005381491 XP_005381546;XP_005381548 MODEL 8947478 protein-coding LOC102013365 vomeronasal type-1 receptor 4-like NW_004955609 69961 70845 - 102013365 AGCD01077050;XM_005414936 XP_005414993 MODEL 8967409 protein-coding Cxcl16 C-X-C motif chemokine ligand 16 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); positive regulation of cell growth (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog) NW_004955467 10132461 10136649 - 102010242 AGCD01051546;GBBH01064209;XM_013522132 XP_013377586 MODEL 9018561 pseudo LOC102007074 60S ribosomal protein L27a pseudogene NW_004955450 9968147 9968719 + 102007074 AGCD01042602 MODEL 8763603 protein-coding Sgcd sarcoglycan delta INVOLVED IN calcium ion homeostasis (ortholog); calcium-mediated signaling (ortholog); cardiac muscle cell contraction (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2F (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) NW_004955408 10273344 10820108 + 102010673 AGCD01008265;AGCD01008266;AGCD01008267;AGCD01008268;AGCD01008269;AGCD01008270;AGCD01008271;AGCD01008272;AGCD01008273;AGCD01008274;GBCE01162943;XM_005376219;XM_013508746 XP_005376276;XP_013364200 MODEL 8891459 ncrna LOC102011810 uncharacterized LOC102011810 NW_004955440 4672850 4697012 - 102011810 AGCD01036266;GBDF01015047;XR_262004 MODEL 9008640 ncrna LOC102005978 uncharacterized LOC102005978 NW_004955445 8848190 8852122 - 102005978 AGCD01039616;GBBH01088001;XR_001235594 MODEL 8781163 protein-coding LOC102003118 olfactory receptor 2AG1-like NW_004955414 22492961 22493908 - 102003118 AGCD01015459;XM_005380176 XP_005380233 MODEL 9006026 protein-coding Atg101 autophagy related 101 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon cancer (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytoplasm (ortholog); phagophore assembly site (ortholog) NW_004955547 2436974 2446849 + 102003385 AGCD01072280;AGCD01072281;GBCB01001472;XM_005411927;XM_013508473;XM_013508474 XP_005411984;XP_013363927;XP_013363928 MODEL 8992388 protein-coding Atxn7l3b ataxin 7 like 3B INVOLVED IN regulation of gene expression (ortholog); FOUND IN cytoplasm (ortholog) NW_004955405 14093770 14097409 + 102007182 AGCD01004919;GBDF01050886;XM_005374326 XP_005374383 MODEL 8977021 ncrna LOC102013735 uncharacterized LOC102013735 NW_004955500 6046786 6051828 - 102013735 AGCD01063867;GBCB01052384;XR_264231 MODEL 9052373 protein-coding Slc36a4 solute carrier family 36 member 4 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-proline transmembrane transporter activity (ortholog); L-tryptophan transmembrane transporter activity (ortholog); INVOLVED IN L-alanine transport (ortholog); proline transport (ortholog); tryptophan transport (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955414 1236179 1286680 + 102028078 AGCD01014760;GBCE01159453;XM_005379715;XM_005379716;XM_005379717;XM_005379718;XM_005379719;XM_013512056;XM_013512057 XP_005379772;XP_005379773;XP_005379774;XP_005379775;XP_005379776;XP_013367510;XP_013367511 MODEL 8782102 protein-coding Arap2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955443 10537763 10719329 + 102012588 AGCD01038379;AGCD01038380;AGCD01038381;AGCD01038382;AGCD01038383;GBBH01146116;XM_005392016;XM_005392017;XM_005392018;XM_005392019;XM_013518104 XP_005392073;XP_005392074;XP_005392075;XP_005392076;XP_013373558 MODEL 8873124 protein-coding Cfap161 cilia and flagella associated protein 161 INVOLVED IN flagellated sperm motility (ortholog); gene expression (ortholog); motile cilium assembly (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); sarcoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955416 11833610 11844452 + 102022191 AGCD01017192;GBCE01134717;GBDJ01352434;XM_005381440;XM_005381441;XM_013512409;XM_013512410 XP_005381497;XP_005381498;XP_013367863;XP_013367864 MODEL 8768877 ncrna LOC102004176 uncharacterized LOC102004176 NW_004955422 28216623 28220532 + 102004176 AGCD01023345;GBDF01261407;XR_260927 MODEL 8899142 protein-coding Boll boule RNA binding protein ENCODES a protein that exhibits identical protein binding (ortholog); translation activator activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); positive regulation of translational initiation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955403 2917694 2963470 + 102012820 AGCD01001740;AGCD01001741;AGCD01001742;GBDF01004912;XM_005373262;XM_013512039;XM_013512041 XP_005373319;XP_013367493;XP_013367495 MODEL 39132065 rrna 5S_rRNA 5S ribosomal RNA 8914868 protein-coding LOC102012159 keratin-associated protein 11-1 NW_004955407 30616573 30617451 - 102012159 AGCD01007639;XM_005375656 XP_005375713 MODEL 9044391 pseudo LOC102010159 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like NW_004955417 3869752 3882123 - 102010159 AGCD01017930;AGCD01017931 MODEL 8762834 ncrna LOC102009756 uncharacterized LOC102009756 NW_004955437 596440 600236 + 102009756 AGCD01034150;AGCD01034151;GBDF01305486;XR_261820 MODEL 8926149 protein-coding LOC102008229 vomeronasal type-1 receptor 48-like NW_004955421 21911814 21912737 + 102008229 AGCD01022124;XM_005383932 XP_005383989 MODEL 39131867 rrna 5S_rRNA 5S ribosomal RNA 8749312 protein-coding Ano9 anoctamin 9 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); chloride channel inhibitor activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955476 11588043 11603027 + 102023258 AGCD01055466;GBBH01197736;XM_005401864 XP_005401921 MODEL 39131356 protein-coding IL20RB interleukin 20 receptor subunit beta 8924496 protein-coding LOC102007472 hemoglobin subunit zeta NW_004955442 17015120 17016686 - 102007472 AGCD01037931;XM_005391674 XP_005391731 MODEL 9020924 protein-coding Lpar5 lysophosphatidic acid receptor 5 INVOLVED IN behavioral response to pain (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH stomach cancer (ortholog) NW_004955413 4238312 4249869 - 102020230 AGCD01013604;GBDI01322578;XM_005378793;XM_005378794;XM_005378795;XM_005378796;XM_005378798;XM_005378799;XM_013511330;XM_013511331;XM_013511332;XM_013511333;XM_013511334;XM_013511336 XP_005378850;XP_005378851;XP_005378852;XP_005378853;XP_005378855;XP_005378856;XP_013366784;XP_013366785;XP_013366786;XP_013366787;XP_013366788;XP_013366790 MODEL 9001480 protein-coding LOC102008992 collagen alpha-1(III) chain-like NW_004955442 14342214 14354918 - 102008992 AGCD01037812;AGCD01037813;GBDJ01377609;XM_013517858;XM_013517859;XM_013517860 XP_013373312;XP_013373313;XP_013373314 MODEL 8742958 protein-coding LOC102010954 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1373617 1378077 + 102010954 AGCD01074469;GBBH01148932;GBDK01175825;XM_013509300 XP_013364754 MODEL 9028273 protein-coding Sod1 superoxide dismutase 1 ENCODES a protein that exhibits copper ion binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN action potential initiation (ortholog); anterograde axonal transport (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN amyotrophic lateral sclerosis pathway; forkhead class A signaling pathway; hypertension pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute kidney failure (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955407 31261451 31267657 + 102014981 AGCD01007644;AGCD01007645;GBDF01011265;XM_013504103 XP_013359557 MODEL 9009520 pseudo LOC102008594 eukaryotic translation initiation factor 2A-like NW_004955406 5948906 5974852 + 102008594 AGCD01005744 MODEL 8796731 protein-coding Rcn1 reticulocalbin 1 INVOLVED IN camera-type eye development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955476 10280669 10289668 + 102009714 AGCD01055419;GBCQ01007481;GBDK01131007;XM_005401900 XP_005401957 MODEL 15036852 trna Trnan-auu transfer RNA asparagine (anticodon AUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978824 8891580 protein-coding Agtr1 angiotensin II receptor type 1 ENCODES a protein that exhibits angiotensin type I receptor activity (ortholog); angiotensin type II receptor activity (ortholog); bradykinin receptor binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); angiotensin-activated signaling pathway (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Alveolar Bone Loss (ortholog); Alzheimer's disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasmic vesicle (ortholog); dendrite (ortholog) NW_004955474 8733942 8781305 - 102016153 AGCD01054560;AGCD01054561;GBCB01076032;XM_005401426;XM_013502791;XR_001230743 XP_005401483;XP_013358245 MODEL 9052854 ncrna LOC102014104 uncharacterized LOC102014104 NW_004955403 40326703 40371419 - 102014104 AGCD01002681;AGCD01002682;AGCD01002683;GBBH01144739;XR_259234 MODEL 8809632 protein-coding Alpl alkaline phosphatase, biomineralization associated ENCODES a protein that exhibits ADP phosphatase activity (ortholog); alkaline phosphatase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion homeostasis (ortholog); cementum mineralization (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH adult hypophosphatasia (ortholog); Alveolar Bone Loss (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular matrix (ortholog); extracellular membrane-bounded organelle (ortholog); extracellular region (ortholog) NW_004955452 1820212 1873877 + 102029036 AGCD01043868;AGCD01043869;GBCE01004528;XM_013519688;XM_013519689;XM_013519690 XP_013375142;XP_013375143;XP_013375144 MODEL 39133941 misc_rna 7SK 7SK RNA 39131539 protein-coding C1QTNF6 C1q and TNF related 6 8742549 protein-coding Wdr48 WD repeat domain 48 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); embryonic organ development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955427 24873616 24917691 - 102026998 AGCD01027525;GBDF01050505;XM_005386566;XM_005386567;XM_013515075 XP_005386623;XP_005386624;XP_013370529 MODEL 8983057 protein-coding Cby2 chibby family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955518 3395464 3410616 + 102015978 AGCD01067802;GBDF01014802;XM_005409088;XM_005409090 XP_005409145;XP_005409147 MODEL 8783146 protein-coding Eras ES cell expressed Ras NW_004955543 381756 383093 + 102026258 AGCD01071579;XM_005415247 XP_005415304 MODEL 9016154 protein-coding Prkd1 protein kinase D1 ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to angiotensin (ortholog); cellular response to endothelin (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN autophagosome membrane (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) NW_004955409 30554095 30860588 + 102017202 AGCD01010303;AGCD01010304;AGCD01010305;AGCD01010306;GBDJ01386770;XM_013510389;XM_013510390 XP_013365843;XP_013365844 MODEL 39134074 misc_rna 7SK 7SK RNA 8753201 protein-coding Pllp plasmolipin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN monoatomic ion transport (ortholog); myelin assembly (ortholog); myelination (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); schizophrenia (ortholog); FOUND IN apical plasma membrane (ortholog); compact myelin (ortholog); Golgi apparatus (ortholog) NW_004955433 14896087 14915794 - 102025039 AGCD01031731;AGCD01031732;GBBH01093584;XM_005388384 XP_005388441 MODEL 8881798 pseudo LOC102004558 U1 small nuclear ribonucleoprotein C-like NW_004955406 37620864 37621806 - 102004558 AGCD01006576 MODEL 8942729 protein-coding Atg12 autophagy related 12 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); cholangiocarcinoma (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); membrane (ortholog) NW_004955408 35607541 35620878 - 102025657 AGCD01008957;GBDJ01233683;XM_005376531 XP_005376588 MODEL 8701884 pseudo LOC102022446 solute carrier family 25 member 46 pseudogene NW_004955402 17208998 17210219 + 102022446 AGCD01000500 MODEL 9047769 protein-coding Dmxl2 Dmx like 2 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN brain development (ortholog); chemical synaptic transmission (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); autism spectrum disorder (ortholog); FOUND IN neuronal dense core vesicle (ortholog); synaptic vesicle (ortholog) NW_004955409 2934755 3089572 + 102022570 AGCD01009230;AGCD01009231;AGCD01009232;AGCD01009233;AGCD01009234;GBBH01193605;GBDF01085229;XM_005376642 XP_005376699 MODEL 39134209 misc_rna 7SK 7SK RNA 9013517 protein-coding Cxcl17 C-X-C motif chemokine ligand 17 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); INVOLVED IN cell migration (ortholog); chemokine-mediated signaling pathway (ortholog); leukocyte chemotaxis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular region (ortholog) NW_004955555 495437 509788 + 102020166 AGCD01073034;AGCD01073035;GBBH01002398;XM_005412354 XP_005412411 MODEL 8922662 protein-coding Cd82 CD82 molecule ASSOCIATED WITH breast carcinoma (ortholog); cervical cancer (ortholog); cervical squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955422 3035887 3069298 - 102023045 AGCD01022499;AGCD01022500;GBBH01000451;XM_005384078;XM_013514276;XM_013514278;XM_013514279 XP_005384135;XP_013369730;XP_013369732;XP_013369733 MODEL 8712869 pseudo LOC102018362 U2 snRNP-associated SURP motif-containing protein pseudogene NW_004955406 30253163 30256294 - 102018362 AGCD01006363 MODEL 8984968 protein-coding Aars2 alanyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits alanine-tRNA ligase activity (ortholog); peptide lactyltransferase (ATP-dependent) activity (ortholog); INVOLVED IN mitochondrial alanyl-tRNA aminoacylation (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); PARTICIPATES IN alanine metabolic pathway; lactic acidosis pathway; primary hyperoxaluria type 1 pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); apraxia (ortholog); autistic disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955437 9915371 9924886 - 102022744 AGCD01034549;GBDI01179754;XM_005389818;XM_013516840 XP_005389875;XP_013372294 MODEL 8765574 protein-coding Adat2 adenosine deaminase tRNA specific 2 ENCODES a protein that exhibits tRNA-specific adenosine-34 deaminase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of neuron migration (ortholog); pyramidal neuron migration to cerebral cortex (ortholog); tRNA wobble adenosine to inosine editing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); tRNA-specific adenosine-34 deaminase complex (ortholog) NW_004955436 16956211 16978070 + 102008886 AGCD01033938;GBDF01178538;XM_005389250;XM_013516646;XR_001234969 XP_005389307;XP_013372100 MODEL 8907554 protein-coding Ackr4 atypical chemokine receptor 4 ENCODES a protein that exhibits chemokine receptor activity (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog) NW_004955501 5922727 5928735 - 102005062 AGCD01064175;GBDK01433060;XM_005406828;XM_005406830;XM_005406832;XM_005406833 XP_005406885;XP_005406887;XP_005406889;XP_005406890 MODEL 8949303 protein-coding LOC102007080 uncharacterized LOC102007080 NW_004955452 2394438 2439074 + 102007080 AGCD01043895;GBDF01015522;XM_005394736;XM_005394737;XR_001236123 XP_005394793;XP_005394794 MODEL 8838990 protein-coding LOC102013366 olfactory receptor 2L13-like NW_004955619 101327 102265 + 102013366 AGCD01077337;XM_005415005 XP_005415062 MODEL 8953172 protein-coding Bop1 BOP1 ribosomal biogenesis factor ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of 5.8S rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Disease Progression (ortholog); melanoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955454 2882694 2907177 - 102026942 AGCD01045038;AGCD01045039;GBBH01143564;XM_005395860 XP_005395917 MODEL 8856953 protein-coding Sgce sarcoglycan epsilon INVOLVED IN kidney development (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH genetic disease (ortholog); Muscle Hypotonia (ortholog); myoclonic dystonia (ortholog); FOUND IN dendrite membrane (ortholog); dystrophin-associated glycoprotein complex (ortholog); Golgi apparatus (ortholog) NW_004955432 11310488 11383803 - 102013326 AGCD01030945;AGCD01030946;AGCD01030947;GBDI01385644;XM_005388045;XM_005388047;XM_005388048;XM_005388049;XM_013516087;XM_013516088;XM_013516089 XP_005388102;XP_005388104;XP_005388105;XP_005388106;XP_013371541;XP_013371542;XP_013371543 MODEL 8919697 pseudo LOC102011811 PCNA-associated factor pseudogene NW_004955440 19528120 19528458 - 102011811 AGCD01036637 MODEL 8928433 protein-coding LOC102004915 tubulin alpha-1B chain-like NW_004955465 12912276 12919581 - 102004915 AGCD01050568;XM_013521782 XP_013377236 MODEL 10304104 protein-coding Cdr1 cerebellar degeneration related 1 NW_004955489 4529580 4553732 + 106146645 AGCD01059906;AGCD01059907;AGCD01059908;GBDI01236035;XM_013504456 XP_013359910 MODEL 39133942 misc_rna 7SK 7SK RNA 9036877 pseudo LOC102008236 tubulin alpha-1C chain-like NW_004955495 3000619 3002493 - 102008236 AGCD01061814 MODEL 8918858 protein-coding Rsf1 remodeling and spacing factor 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); histone binding (ortholog); histone octamer slider activity (ortholog); INVOLVED IN chromatin organization (ortholog); chromatin remodeling (ortholog); DNA-templated transcription initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RSF complex (ortholog) NW_004955414 14084812 14212162 + 102007538 AGCD01015141;AGCD01015142;AGCD01015143;GBDF01221258;XM_005379827;XM_013511807 XP_005379884;XP_013367261 MODEL 8893441 protein-coding Slc37a1 solute carrier family 37 member 1 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955407 39203934 39268273 - 102010551 AGCD01007823;AGCD01007824;GBBH01090368;XM_005375814;XM_005375818;XM_005375819;XM_005375820;XM_005375822;XR_001231341;XR_001231343 XP_005375871;XP_005375875;XP_005375876;XP_005375877;XP_005375879 MODEL 8900487 protein-coding Anos1 anosmin 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Delayed Puberty (ortholog); Developmental Disabilities (ortholog); FOUND IN extracellular region (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955499 6486287 6686739 - 102026654 AGCD01063547;AGCD01063548;AGCD01063549;AGCD01063550;AGCD01063551;AGCD01063552;AGCD01063553;AGCD01063554;GBCE01028302;GBDI01025617;XM_013505608 XP_013361062 MODEL 8971978 protein-coding LOC102022449 zinc finger protein 709-like NW_004955626 47966 58915 + 102022449 AGCD01077462;AGCD01077463;GBDF01184976;XM_013510163 XP_013365617 MODEL 8900618 protein-coding LOC102004177 olfactory receptor 4X2-like NW_004955422 274679 279123 - 102004177 AGCD01022402;GBCQ01019293;XM_005384933 XP_005384990 MODEL 39132066 rrna 5S_rRNA 5S ribosomal RNA 8795307 protein-coding Arap3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of Rac protein signal transduction (ortholog); negative regulation of Rho protein signal transduction (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog); ruffle (ortholog) NW_004955415 12098009 12121722 + 102003649 AGCD01016184;AGCD01016185;GBDK01075561;XM_005380719;XM_005380720;XM_005380721;XM_005380722;XM_013512253 XP_005380776;XP_005380777;XP_005380778;XP_005380779;XP_013367707 MODEL 8978226 trna Trnan-guu transfer RNA asparagine (anticodon GUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978825 AGCD01028556;AGCD01030347;AGCD01043507;AGCD01049456;AGCD01052199;AGCD01062085;AGCD01080156 MODEL 8857018 protein-coding Clec17a C-type lectin domain containing 17A ENCODES a protein that exhibits D-mannose binding (ortholog); fucose binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog) NW_004955415 31715870 31738131 - 102017008 AGCD01016692;AGCD01016693;AGCD01016694;GBBH01155598;XM_013512236;XM_013512237 XP_013367690;XP_013367691 MODEL 8757275 pseudo LOC102003119 ATP-binding cassette sub-family G member 2 pseudogene NW_004955470 8863858 8865469 + 102003119 AGCD01052834 MODEL 9036098 ncrna LOC102012163 uncharacterized LOC102012163 NW_004955409 610554 611768 - 102012163 AGCD01009158;GBDF01126147;XR_259741 MODEL 8733562 protein-coding LOC102009757 ubiquinol-cytochrome-c reductase complex assembly factor 2 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); positive regulation of mitochondrial translation (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 7 (ortholog); FOUND IN Cbp3p-Cbp6 complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955437 2107475 2119892 - 102009757 AGCD01034260;GBDF01065831;XM_005389507 XP_005389564 MODEL 39131868 rrna 5S_rRNA 5S ribosomal RNA 39134075 misc_rna 7SK 7SK RNA 8930587 ncrna LOC102013737 uncharacterized LOC102013737 NW_004955426 6400851 6492632 + 102013737 AGCD01026156;AGCD01026157;GBDF01164186;XR_001234306;XR_261193 MODEL 8905654 protein-coding Auh AU RNA binding methylglutaconyl-CoA hydratase ENCODES a protein that exhibits enoyl-CoA hydratase activity (ortholog); methylglutaconyl-CoA hydratase activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 1 (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955515 971778 1124019 + 102006064 AGCD01067218;AGCD01067219;AGCD01067220;GBCQ01041316;GBCQ01041319;XM_013506890;XM_013506891 XP_013362344;XP_013362345 MODEL 8789629 protein-coding Erbb2 erb-b2 receptor tyrosine kinase 2 ENCODES a protein that exhibits coreceptor activity (ortholog); ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); INVOLVED IN axon regeneration (ortholog); cell population proliferation (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; endometrial cancer pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); amblyopia (ortholog); FOUND IN cell projection; apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955451 14442816 14456009 + 102029927 AGCD01043554;GBDF01303586;XM_005394319 XP_005394376 MODEL 9028747 protein-coding LOC102007473 N-formyl peptide receptor 2-like NW_004955558 724982 760617 - 102007473 AGCD01073387;AGCD01073388;AGCD01073389;GBDK01358972;XM_005412669;XM_013508868;XM_013508869 XP_005412726;XP_013364322;XP_013364323 MODEL 8932474 protein-coding Il20rb interleukin 20 receptor subunit beta ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-20 binding (ortholog); INVOLVED IN homeostasis of number of cells within a tissue (ortholog); immune response-inhibiting signal transduction (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); toxic shock syndrome (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); signaling receptor complex (ortholog) NW_004955501 1826687 1863261 - 102016401 AGCD01064063;AGCD01064064;GBCC01037652;XM_013505811;XR_001231528 XP_013361265 MODEL 9017592 ncrna LOC102008997 uncharacterized LOC102008997 NW_004955402 56853757 56893100 + 102008997 AGCD01001479;GBDF01111279;XR_001230748;XR_259106 MODEL 8923000 protein-coding Sod2 superoxide dismutase 2 ENCODES a protein that exhibits DNA binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); apoptotic mitochondrial changes (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN hypertension pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute kidney tubular necrosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955439 21209101 21223538 + 102018438 AGCD01036146;AGCD01036147;AGCD01036148;GBBH01000815;XM_005390723 XP_005390780 MODEL 8887962 protein-coding Dna2 DNA replication helicase/nuclease 2 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-flap endonuclease activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA double-strand break processing (ortholog); DNA replication (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 6 (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955425 20664412 20705070 - 102009079 AGCD01025752;AGCD01025753;GBDF01307460;XM_013514832;XM_013514833;XM_013514834 XP_013370286;XP_013370287;XP_013370288 MODEL 8960817 protein-coding Rcn2 reticulocalbin 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955450 1838836 1854045 + 102019002 AGCD01042371;GBCE01001531;XM_005393477 XP_005393534 MODEL 8769838 protein-coding Ackr5 atypical chemokine receptor 5 ENCODES a protein that exhibits adrenomedullin receptor activity (ortholog); C-C chemokine binding (ortholog); C-X-C chemokine binding (ortholog); INVOLVED IN negative regulation of chemokine-mediated signaling pathway (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); pulmonary hypertension (ortholog); FOUND IN endosome (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) NW_004955458 4749966 4754314 + 102018161 AGCD01047438;GBBH01222017;XM_005397336 XP_005397393 MODEL 8897082 protein-coding Aasdh aminoadipate-semialdehyde dehydrogenase INVOLVED IN amino acid activation for nonribosomal peptide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955447 14623532 14648121 + 102007828 AGCD01041017;AGCD01041018;GBBH01082256;GBCB01131679;XM_013518497 XP_013373951 MODEL 8958452 ncrna LOC102010160 uncharacterized LOC102010160 NW_004955481 5183643 5195662 + 102010160 AGCD01056965;GBDF01117312;XR_263780;XR_263781 MODEL 8807488 pseudo LOC102014108 40S ribosomal protein SA-like NW_004955405 2910163 2917915 + 102014108 AGCD01004627 MODEL 8994196 protein-coding Als2 alsin Rho guanine nucleotide exchange factor ALS2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); behavioral fear response (ortholog); endosomal transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 2 (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955403 22449 104577 + 102016967 AGCD01001679;AGCD01001680;AGCD01001681;GBCQ01070450;XM_005373184;XM_005373185;XM_005373186;XM_013511695;XM_013511698 XP_005373241;XP_005373242;XP_005373243;XP_013367149;XP_013367152 MODEL 8788760 protein-coding Ficd FIC domain protein adenylyltransferase ENCODES a protein that exhibits AMPylase activity (ortholog); ATP binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN regulation of IRE1-mediated unfolded protein response (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hereditary spastic paraplegia 92 (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955455 9794919 9799006 + 102023776 AGCD01045930;GBDF01086000;XM_005396460;XM_005396461;XM_005396462;XM_013520486 XP_005396517;XP_005396518;XP_005396519;XP_013375940 MODEL 9037106 protein-coding Arb2a ARB2 cotranscriptional regulator A INVOLVED IN neural crest cell development (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955418 18213824 18624082 + 102021346 AGCD01019165;AGCD01019166;AGCD01019167;AGCD01019168;AGCD01019169;AGCD01019170;AGCD01019171;AGCD01019172;AGCD01019173;AGCD01019174;AGCD01019175;AGCD01019176;GBDF01219960;XM_005382263;XM_005382264;XM_005382265;XM_005382267;XM_013512944;XM_013512945;XM_013512947;XM_013512948;XM_013512949;XM_013512950;XM_013512951 XP_005382320;XP_005382321;XP_005382322;XP_005382324;XP_013368398;XP_013368399;XP_013368401;XP_013368402;XP_013368403;XP_013368404;XP_013368405 MODEL 9039010 protein-coding LOC102011813 keratin, type II cytoskeletal 74 NW_004955547 2973452 2981010 - 102011813 AGCD01072302;GBDF01116746;XM_005411949 XP_005412006 MODEL 9063794 protein-coding Wdr49 WD repeat domain 49 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955448 16701241 16840180 - 102011823 AGCD01041701;AGCD01041702;AGCD01041703;GBDK01313375;XM_013518658;XM_013518659;XM_013518660;XM_013518661;XM_013518662;XM_013518663 XP_013374112;XP_013374113;XP_013374114;XP_013374115;XP_013374116;XP_013374117 MODEL 8825473 protein-coding Cc2d1a coiled-coil and C2 domain containing 1A ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN apical dendrite arborization (ortholog); centrosome cycle (ortholog); dendrite arborization (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder (ortholog); autosomal recessive intellectual developmental disorder 3 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955415 32667832 32682945 + 102006908 AGCD01016730;GBDF01085117;XM_005381071;XM_005381072;XM_013512196 XP_005381128;XP_005381129;XP_013367650 MODEL 8949283 protein-coding LOC102004922 olfactory receptor 51V1-like NW_004955414 21049076 21057022 - 102004922 AGCD01015402;AGCD01015403;AGCD01015404;XM_005380491 XP_005380548 MODEL 8831491 protein-coding Lpar6 lysophosphatidic acid receptor 6 INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH hypotrichosis (ortholog); hypotrichosis 1 (ortholog); hypotrichosis 8 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955431 2077093 2079000 - 102015753 AGCD01029922;GBCE01169968;XM_005387556 XP_005387613 MODEL 8788209 protein-coding Prkd2 protein kinase D2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein kinase C binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to vascular endothelial growth factor stimulus (ortholog); intracellular signal transduction (ortholog); positive regulation of angiogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955574 723933 750794 - 102029242 AGCD01075126;GBBH01116301;XM_005413839;XM_005413841;XM_013509567;XM_013509568 XP_005413896;XP_005413898;XP_013365021;XP_013365022 MODEL 39134076 misc_rna 7SK 7SK RNA 8872960 protein-coding Cfap184 cilia and flagella associated protein 184 NW_004955514 3478667 3480747 + 102016303 AGCD01067097;GBDI01353626;XM_005408799 XP_005408856 MODEL 9014710 ncrna LOC102010958 uncharacterized LOC102010958 NW_004955402 5775147 5790716 - 102010958 AGCD01000140;AGCD01000141;GBDI01357888;XR_259032 MODEL 8881163 ncrna LOC102008595 uncharacterized LOC102008595 NW_004955455 5552047 5558107 + 102008595 AGCD01045738;GBDF01182597;XR_001236290;XR_001236291 MODEL 39134210 misc_rna 7SK 7SK RNA 8917192 protein-coding Rskr ribosomal protein S6 kinase related NW_004955481 4544798 4549005 + 102028536 AGCD01056943;GBDJ01001838;XM_005402741;XM_013503448 XP_005402798;XP_013358902 MODEL 8875785 protein-coding Slc37a2 solute carrier family 37 member 2 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955412 26119121 26143728 + 102018483 AGCD01013185;GBCE01075926;XM_005378455;XM_013511237;XM_013511238 XP_005378512;XP_013366691;XP_013366692 MODEL 8721452 ncrna LOC102022450 uncharacterized LOC102022450 NW_004955403 48110321 48128265 - 102022450 AGCD01002914;GBDK01024559;XR_001234474;XR_259248 MODEL 9018182 protein-coding Anp32a acidic nuclear phosphoprotein 32 family member A ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); exogenous protein binding (ortholog); integrin binding (ortholog); INVOLVED IN negative regulation of plasma membrane bounded cell projection assembly (ortholog); negative regulation of protein modification process (ortholog); nucleocytoplasmic transport (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Animal Disease Models (ortholog); Brain Injuries (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 7449368 7484524 + 102018788 AGCD01042538;GBDJ01127727;XM_005393670;XM_005393671 XP_005393727;XP_005393728 MODEL 8826759 protein-coding Adck1 aarF domain containing kinase 1 INVOLVED IN negative regulation of mitochondrial fusion (ortholog); positive regulation of cristae formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955438 1638673 1760791 + 102019958 AGCD01034986;AGCD01034987;GBDF01291374;XM_005390216;XM_005390222;XM_013517182;XM_013517183;XM_013517184 XP_005390273;XP_005390279;XP_013372636;XP_013372637;XP_013372638 MODEL 8964005 pseudo LOC102007082 plastin-3 pseudogene NW_004955452 11705919 11707877 + 102007082 AGCD01044343 MODEL 8719292 protein-coding LOC102013368 disintegrin and metalloproteinase domain-containing protein 20-like NW_004955656 248 2205 - 102013368 AGCD01077844;GBDF01010724;GBDF01010725;XM_005415057 XP_005415114 MODEL 8755597 protein-coding Sgcg sarcoglycan gamma INVOLVED IN gene expression (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2C (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); FOUND IN dystroglycan complex (ortholog); plasma membrane (ortholog); sarcoglycan complex (ortholog) NW_004955497 3592041 3702780 + 102013189 AGCD01062549;AGCD01062550;AGCD01062551;AGCD01062552;GBCB01003278;GBDI01356297;XM_005406371 XP_005406428 MODEL 8818596 protein-coding Pln phospholamban ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); centronuclear myopathy (ortholog); FOUND IN calcium ion-transporting ATPase complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955436 1439098 1447070 + 102010626 AGCD01033577;GBDK01316951;XM_005389124 XP_005389181 MODEL 9043144 protein-coding Cdr2 cerebellar degeneration related protein 2 INVOLVED IN alpha-beta T cell activation involved in immune response (ortholog); cell activation (ortholog); T cell anergy (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955493 982559 1006117 - 102012770 AGCD01060873;AGCD01060874;AGCD01060875;GBDF01074692;GBDK01280802;XM_013504851 XP_013360305 MODEL 8867541 protein-coding Als2cl ALS2 C-terminal like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955420 25440641 25455872 + 102021671 AGCD01021358;GBBH01165303;XM_005383428;XM_005383430;XM_005383431;XM_005383433;XM_013513492 XP_005383485;XP_005383487;XP_005383488;XP_005383490;XP_013368946 MODEL 8849641 protein-coding Atg13 autophagy related 13 ENCODES a protein that exhibits kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); mitophagy (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN autophagy pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955422 1398646 1432440 - 102004393 AGCD01022457;AGCD01022458;GBDF01084951;XM_005384010;XM_005384011;XM_005384012;XM_005384014;XM_005384015;XM_005384016;XM_005384018;XM_013514204;XM_013514205 XP_005384067;XP_005384068;XP_005384069;XP_005384071;XP_005384072;XP_005384073;XP_005384075;XP_013369658;XP_013369659 MODEL 8772136 protein-coding Cxcl8 C-X-C motif chemokine ligand 8 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR chemokine receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN chemokine (C-X-C motif) ligand 8 signaling pathway; mTOR signaling pathway; syndecan signaling pathway; ASSOCIATED WITH otitis media; acute asthma (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular region (ortholog); G protein-coupled receptor complex (ortholog); membrane (ortholog) NW_004955474 247326 250355 + 102003438 AGCD01054209;GBBH01138820;XM_013502794 XP_013358248 MODEL 9063938 pseudo LOC102018363 60S ribosomal protein L36 pseudogene NW_004955454 3467514 3481312 + 102018363 AGCD01045080;AGCD01045081;AGCD01045082 MODEL 8934050 protein-coding Cd83 CD83 molecule ENCODES a protein that exhibits ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN negative regulation of interleukin-4 production (ortholog); positive regulation of CD4-positive, alpha-beta T cell differentiation (ortholog); positive regulation of interleukin-10 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); cervical cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955465 676006 692770 - 102009363 AGCD01050313;GBDK01237781;XM_005398793 XP_005398850 MODEL 8820165 protein-coding LOC102004182 zinc finger protein 14-like NW_004955499 330410 425895 + 102004182 AGCD01063220;AGCD01063221;AGCD01063222;AGCD01063223;AGCD01063224;AGCD01063225;AGCD01063226;AGCD01063227;AGCD01063228;AGCD01063229;AGCD01063230;AGCD01063231;GBCB01041247;XM_005406502;XM_013505562 XP_005406559;XP_013361016 MODEL 8986303 protein-coding Il21 interleukin 21 ENCODES a protein that exhibits cytokine receptor binding (ortholog); interleukin-2 receptor binding (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); allergic disease (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955428 18057096 18065492 + 102014809 AGCD01028056;XM_005386769 XP_005386826 MODEL 8785225 protein-coding Agtr2 angiotensin II receptor type 2 ENCODES a protein that exhibits angiotensin type II receptor activity (ortholog); transcription factor binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); brain renin-angiotensin system (ortholog); PARTICIPATES IN angiotensin II signaling pathway; angiotensin II signaling pathway via AT2 receptor; angiotensin III signaling pathway; ASSOCIATED WITH AIDS-Associated Nephropathy (ortholog); Alveolar Bone Loss (ortholog); asthma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955534 3653112 3654248 - 102021704 AGCD01070589;XM_013507702 XP_013363156 MODEL 8917995 protein-coding LOC102004559 chromosome unknown open reading frame, human C12orf43 ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); thymoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955455 10684757 10693511 + 102004559 AGCD01045961;GBDF01224343;XM_005396486;XM_005396487;XM_005396488;XM_005396489 XP_005396543;XP_005396544;XP_005396545;XP_005396546 MODEL 8795989 protein-coding Clec19a C-type lectin domain containing 19A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 2807410 2839617 - 102003288 AGCD01037481;AGCD01037482;XM_013517644 XP_013373098 MODEL 8742333 protein-coding C1qtnf7 C1q and TNF related 7 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Hypoxia (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955480 8546222 8644361 - 102018493 AGCD01056729;AGCD01056730;GBDJ01388679;XM_005402531;XM_005402532;XM_005402533 XP_005402588;XP_005402589;XP_005402590 MODEL 8733046 protein-coding Rcn3 reticulocalbin 3 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN collagen biosynthetic process (ortholog); ERAD pathway (ortholog); lung epithelium development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955559 1309621 1319925 - 102012810 AGCD01073640;GBCQ01100573;XM_005412867;XM_013509004;XM_013509005;XM_013509006 XP_005412924;XP_013364458;XP_013364459;XP_013364460 MODEL 8981117 protein-coding Slc37a3 solute carrier family 37 member 3 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); xenobiotic transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) NW_004955494 2891415 2933067 + 102022095 AGCD01061455;GBDK01189500;XM_005405423;XM_013504991;XM_013504992 XP_005405480;XP_013360445;XP_013360446 MODEL 9021656 protein-coding Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase ENCODES a protein that exhibits holo-[acyl-carrier-protein] synthase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); protein maturation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955412 8723828 8747684 + 102027624 AGCD01012722;GBBH01093348;XM_005378020 XP_005378077 MODEL 39133943 misc_rna 7SK 7SK RNA 8754871 ncrna LOC102012171 uncharacterized LOC102012171 NW_004955462 1256543 1258197 + 102012171 AGCD01049105;GBDF01021159;XR_263088 MODEL 8916145 pseudo LOC102013370 serine/Arginine-related protein 53 pseudogene NW_004955403 40310550 40311721 - 102013370 AGCD01002680;XM_005373899 MODEL 8968131 protein-coding LOC102008239 prolyl-tRNA synthetase associated domain-containing protein 1 NW_004955424 27774507 27776459 - 102008239 AGCD01025126;GBCQ01153725;XM_005385777 XP_005385834 MODEL 8727472 protein-coding LOC102009764 keratin, type II cytoskeletal 75 NW_004955547 2773524 2784448 - 102009764 AGCD01072294;GBCB01107480;XM_005411943 XP_005412000 MODEL 8974596 pseudo LOC102005982 DCN1-like protein 1 pseudogene NW_004955582 422159 422898 - 102005982 AGCD01075756 MODEL 8710064 protein-coding Arc activity regulated cytoskeleton associated protein ENCODES a protein that exhibits mRNA binding (ortholog); structural molecule activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); endoderm development (ortholog); learning (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcoholic Intoxication (ortholog); Alzheimer's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955454 1379998 1383414 - 102018684 AGCD01044968;GBDJ01389179;XM_005395731 XP_005395788 MODEL 8978313 protein-coding Aunip aurora kinase A and ninein interacting protein ENCODES a protein that exhibits damaged DNA binding (ortholog); DNA damage sensor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of double-strand break repair via nonhomologous end joining (ortholog); spindle organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955452 5323345 5336589 - 102008686 AGCD01044018;GBDK01198486;XM_005394827;XM_005394828;XM_013519653 XP_005394884;XP_005394885;XP_013375107 MODEL 9017736 protein-coding Cc2d1b coiled-coil and C2 domain containing 1B ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); nucleoplasm (ortholog) NW_004955464 6792456 6805284 + 102019151 AGCD01050039;GBDK01002298;XM_013521614;XM_013521615;XM_013521616;XM_013521617 XP_013377068;XP_013377069;XP_013377070;XP_013377071 MODEL 8831464 protein-coding Fig4 FIG4 phosphoinositide 5-phosphatase ENCODES a protein that exhibits phosphatidylinositol bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process (ortholog); locomotory behavior (ortholog); myelin assembly (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 11 (ortholog); FOUND IN endosome membrane (ortholog); PAS complex (ortholog); recycling endosome (ortholog) NW_004955411 3135752 3217891 - 102015087 AGCD01011539;AGCD01011540;AGCD01011541;AGCD01011542;GBDF01046654;GBDF01121439;XM_005377617 XP_005377674 MODEL 8929960 protein-coding LOC102009002 KN motif and ankyrin repeat domain-containing protein 2-like NW_004955774 14744 24159 - 102009002 AGCD01078322;AGCD01078323;AGCD01078324;GBCQ01009072;GBDJ01022892;XM_013510190 XP_013365644 MODEL 8819590 protein-coding LOC102010960 zinc finger protein 154-like NW_004955584 561048 567412 + 102010960 AGCD01075948;GBDF01281692;XM_005414367 XP_005414424 MODEL 8743330 protein-coding Erbb3 erb-b2 receptor tyrosine kinase 3 ENCODES a protein that exhibits ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amblyopia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN apical part of cell; apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955458 3683126 3701752 + 102028937 AGCD01047336;AGCD01047337;GBBH01093140;GBDJ01015857;XM_005397284 XP_005397341 MODEL 8868620 protein-coding LOC102007476 putative methyl-CpG-binding domain protein 3-like 5 NW_004955563 661965 676066 + 102007476 AGCD01074073;AGCD01074074;AGCD01074075;GBDF01166412;XM_005413108 XP_005413165 MODEL 8772054 protein-coding Sod3 superoxide dismutase 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); superoxide dismutase activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); blood vessel diameter maintenance (ortholog); nitric oxide metabolic process (ortholog); PARTICIPATES IN cardiovascular system disease pathway; diabetes mellitus pathway; ASSOCIATED WITH brain ischemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955480 257716 263149 - 102023262 AGCD01056580;AGCD01056581;GBBH01033040;GBCC01000175;XM_013503333 XP_013358787 MODEL 8976889 protein-coding Cfap20 cilia and flagella associated protein 20 INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); positive regulation of cell motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); centriole (ortholog) NW_004955433 15648529 15663308 - 102010617 AGCD01031760;GBDF01049907;XM_005388433 XP_005388490 MODEL 9014292 protein-coding LOC102008596 keratin-associated protein 20-2-like NW_004955407 30188698 30188859 + 102008596 AGCD01007628;XM_005375645 XP_005375702 MODEL 39134211 misc_rna 7SK 7SK RNA 8900586 trna Trnap-agg transfer RNA proline (anticodon AGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978806 AGCD01015187;AGCD01037806;AGCD01049336;AGCD01056483;AGCD01057606;AGCD01072566 MODEL 8955571 protein-coding Bora BORA aurora kinase A activator ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN regulation of mitotic nuclear division (ortholog); regulation of mitotic spindle organization (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN meiotic spindle (ortholog) NW_004955404 33923496 33946113 - 102027935 AGCD01004084;GBBH01137438;XM_005374192;XM_005374193 XP_005374249;XP_005374250 MODEL 39131870 rrna 5S_rRNA 5S ribosomal RNA 8922743 protein-coding LOC102003121 zinc finger protein 93-like NW_004955474 95780 107152 + 102003121 AGCD01054200;AGCD01054201;GBCE01168727;XM_005401299;XM_013502775;XM_013502776 XP_005401356;XP_013358229;XP_013358230 MODEL 8860222 pseudo LOC102014111 ribosome biogenesis protein BRX1 homolog NW_004955454 15678137 15679272 - 102014111 AGCD01045496 MODEL 8764573 protein-coding Anp32b acidic nuclear phosphoprotein 32 family member B ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN inner ear development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell differentiation (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955419 27471539 27553078 - 102021129 AGCD01020438;AGCD01020439;AGCD01020440;AGCD01020441;GBCB01080205;XM_005382838;XM_005382839;XM_013513224 XP_005382895;XP_005382896;XP_013368678 MODEL 8932773 pseudo LOC102013738 putative ataxin-7-like protein 3B NW_004955505 4732285 4732553 + 102013738 AGCD01065131 MODEL 8845975 protein-coding Wdr5 WD repeat domain 5 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4me1 reader activity (ortholog); histone H3Q5ser reader activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuron projection development (ortholog); positive regulation of gluconeogenesis (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN ATAC complex (ortholog); histone acetyltransferase complex (ortholog); histone methyltransferase complex (ortholog) NW_004955513 3198655 3213754 + 102023728 AGCD01066899;GBDI01187396;XM_005408463;XM_013506677 XP_005408520;XP_013362131 MODEL 8717092 protein-coding Prkd3 protein kinase D3 ENCODES a protein that exhibits kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955441 5051079 5112791 - 102004976 AGCD01036867;AGCD01036868;AGCD01036869;GBBH01149583;GBDJ01031250;XM_005390869 XP_005390926 MODEL 39132067 rrna 5S_rRNA 5S ribosomal RNA 8879106 protein-coding Dnaaf1 dynein axonemal assembly factor 1 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); Ciliary Motility Disorders (ortholog); FOUND IN axoneme (ortholog) NW_004955564 132497 149399 - 102026049 AGCD01074187;GBCE01141752;GBDF01010850;XM_013509203 XP_013364657 MODEL 8922016 protein-coding Rsl1d1 ribosomal L1 domain containing 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN regulation of apoptotic process (ortholog); regulation of cellular senescence (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN nucleolus (ortholog) NW_004955442 6749038 6764461 + 102025293 AGCD01037596;GBDF01080304;XM_005391158 XP_005391215 MODEL 8737569 pseudo LOC102010171 40S ribosomal protein SA pseudogene NW_004955421 22931886 22933055 - 102010171 AGCD01022164 MODEL 8731364 protein-coding Acly ATP citrate lyase ENCODES a protein that exhibits ATP citrate synthase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA metabolic process (ortholog); acyl-CoA biosynthetic process (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congestive heart failure (ortholog); FOUND IN ATP-dependent citrate lyase complex (ortholog); cytosol (ortholog) NW_004955451 16058916 16091831 - 102008173 AGCD01043651;AGCD01043652;GBCE01052163;XM_005394422;XM_005394423 XP_005394479;XP_005394480 MODEL 8840638 protein-coding Adck2 aarF domain containing kinase 2 INVOLVED IN regulation of ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955494 2736466 2745491 - 102007670 AGCD01061448;GBCB01025083;GBCE01137623;XM_005405535 XP_005405592 MODEL 8717155 pseudo LOC102007084 signal transducer CD24 pseudogene NW_004955406 23812162 23812599 - 102007084 AGCD01006185 MODEL 8982880 protein-coding Il21r interleukin 21 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); atopic dermatitis (ortholog); B-cell lymphoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955493 5613704 5646692 + 102007025 AGCD01061071;AGCD01061072;GBDI01219894;GBDI01219902;XM_013504819 XP_013360273 MODEL 8838902 protein-coding Clec1a C-type lectin domain family 1 member A INVOLVED IN cell recognition (ortholog); defense response to fungus (ortholog); immune response (ortholog); ASSOCIATED WITH aspergillosis (ortholog) NW_004955413 7742753 7783299 + 102009032 AGCD01013830;AGCD01013831;GBDK01130331;XM_005378939;XM_013511524;XM_013511525;XM_013511526;XM_013511527 XP_005378996;XP_013366978;XP_013366979;XP_013366980;XP_013366981 MODEL 39134077 misc_rna 7SK 7SK RNA 9005016 protein-coding Lpcat1 lysophosphatidylcholine acyltransferase 1 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-alkylglycerophosphocholine O-acetyltransferase activity (ortholog); INVOLVED IN negative regulation of phosphatidylcholine biosynthetic process (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylcholine biosynthetic process (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955504 760941 791996 - 102020588 AGCD01064829;GBBH01033177;GBDF01208884;XM_013505909 XP_013361363 MODEL 8793199 pseudo LOC102013371 40S ribosomal protein S3a pseudogene NW_004955451 12173170 12175229 - 102013371 AGCD01043377 MODEL 39133944 misc_rna 7SK 7SK RNA 8767676 ncrna LOC102008245 uncharacterized LOC102008245 NW_004955429 19596397 19597902 - 102008245 AGCD01028966;GBCB01088322;XR_261365 MODEL 8837526 protein-coding Sgcz sarcoglycan zeta ASSOCIATED WITH amphetamine abuse (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog); sarcoglycan complex (ortholog) NW_004955463 2114115 3127633 + 102013394 AGCD01049539;AGCD01049540;AGCD01049541;AGCD01049542;AGCD01049543;AGCD01049544;AGCD01049545;AGCD01049546;AGCD01049547;AGCD01049548;AGCD01049549;AGCD01049550;AGCD01049551;AGCD01049552;AGCD01049553;AGCD01049554;AGCD01049555;AGCD01049556;AGCD01049557;AGCD01049558;AGCD01049559;AGCD01049560;AGCD01049561;AGCD01049562;AGCD01049563;AGCD01049564;AGCD01049565;AGCD01049566;AGCD01049567;AGCD01049568;AGCD01049569;AGCD01049570;AGCD01049571;AGCD01049572;AGCD01049573;AGCD01049574;AGCD01049575;AGCD01049576;AGCD01049577;GBDF01041307;XM_005398345 XP_005398402 MODEL 8982208 protein-coding Plod1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 ENCODES a protein that exhibits ferrous iron binding (ortholog); L-ascorbic acid binding (ortholog); peptide binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); epidermis development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Arachnodactyly (ortholog); FOUND IN catalytic complex (ortholog) NW_004955486 1967771 1990561 - 102003972 AGCD01058976;AGCD01058977;GBCB01022681;GBDJ01076519;XM_005403978 XP_005404035 MODEL 9049061 protein-coding LOC102005985 uncharacterized LOC102005985 NW_004955450 13197296 13199813 + 102005985 AGCD01042729;XM_005393815 XP_005393872 MODEL 39131401 protein-coding ALX1 ALX homeobox 1 8702851 protein-coding LOC102004199 trace amine-associated receptor 9 NW_004955436 13004804 13005842 + 102004199 AGCD01033849;XM_005415376 XP_005415433 MODEL 8809408 pseudo LOC102018364 lysophosphatidic acid receptor 1-like NW_004955454 3717699 3718824 - 102018364 AGCD01045095 MODEL 8716527 protein-coding Figla folliculogenesis specific bHLH transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); genetic disease (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955424 14393566 14402971 + 102003889 AGCD01024654;GBDF01007679;XM_013514581;XM_013514582 XP_013370035;XP_013370036 MODEL 8961807 protein-coding Cxcl9 C-X-C motif chemokine ligand 9 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemotaxis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955433 724566 731945 - 102009209 AGCD01031335;GBDK01027907;XM_005388165 XP_005388222 MODEL 8930060 protein-coding Atg14 autophagy related 14 ENCODES a protein that exhibits GTPase binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); autophagosome membrane docking (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN autophagosome (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955466 13898311 13972506 + 102010683 AGCD01051190;AGCD01051191;AGCD01051192;AGCD01051193;AGCD01051194;AGCD01051195;AGCD01051196;AGCD01051197;GBDJ01000759;XM_013521995 XP_013377449 MODEL 8835420 protein-coding LOC102010962 small proline-rich protein 3-like NW_004955592 393237 394484 - 102010962 AGCD01076311;GBDI01016409;XM_005414615 XP_005414672 MODEL 9020712 protein-coding LOC102008598 keratin-associated protein 10-7-like NW_004955407 41534110 41537176 - 102008598 AGCD01007870;XM_013505446 XP_013360900 MODEL 9067374 pseudo LOC102007478 ferritin light chain pseudogene NW_004955566 8758 10353 - 102007478 AGCD01074343;XM_005413274 MODEL 8844853 ncrna LOC102011816 uncharacterized LOC102011816 NW_004955443 10236461 10240981 - 102011816 AGCD01038372;GBDF01078584;XR_262203 MODEL 8771059 protein-coding Agtrap angiotensin II receptor associated protein ENCODES a protein that exhibits angiotensin type II receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of blood pressure (ortholog); response to hypoxia (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; ASSOCIATED WITH acquired metabolic disease (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN cell cortex (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955486 2137249 2149978 - 102007902 AGCD01058990;AGCD01058991;GBDK01194140;XM_005403993 XP_005404050 MODEL 10076501 protein-coding C1qtnf8 C1q and TNF related 8 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); ASSOCIATED WITH uveal melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955442 16159901 16162152 + 106149289 AGCD01037893;XM_013517653 XP_013373107 MODEL 9047164 protein-coding Cfap20dc CFAP20 domain containing ASSOCIATED WITH acute myeloid leukemia (ortholog); thymoma (ortholog) NW_004955430 1216453 1472083 + 102029990 AGCD01029118;AGCD01029119;AGCD01029120;AGCD01029121;AGCD01029122;AGCD01029123;AGCD01029124;AGCD01029125;AGCD01029126;GBDI01225416;GBDI01225431;XM_005387269;XM_005387270;XM_005387271;XM_005387272;XM_005387273;XM_005387274;XM_005387276;XM_013515699 XP_005387326;XP_005387327;XP_005387328;XP_005387329;XP_005387330;XP_005387331;XP_005387333;XP_013371153 MODEL 8732733 protein-coding Rcor1 REST corepressor 1 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN DNA repair complex (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955538 1774910 1880550 + 102003586 AGCD01071088;AGCD01071089;GBDF01187302;GBDJ01279131;XM_005410756;XM_013507882 XP_005410813;XP_013363336 MODEL 8743577 protein-coding LOC102010175 sulfotransferase 1A1-like NW_004955493 6792319 6795493 - 102010175 AGCD01061139;AGCD01061140;GBCQ01097961;GBCQ01097964;XM_013504817 XP_013360271 MODEL 8785323 protein-coding Slc37a4 solute carrier family 37 member 4 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); glucose-6-phosphate transmembrane transporter activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); gluconeogenesis (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN electron transport chain pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH anemia (ortholog); cervical cancer (ortholog); congenital disorder of glycosylation type IIw (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955412 20133652 20140134 - 102022899 AGCD01012994;GBCQ01000749;XM_005378292;XM_013511130;XM_013511131;XM_013511132;XM_013511133;XM_013511134;XM_013511135 XP_005378349;XP_013366584;XP_013366585;XP_013366586;XP_013366587;XP_013366588;XP_013366589 MODEL 8715372 protein-coding Aass aminoadipate-semialdehyde synthase ENCODES a protein that exhibits saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity (ortholog); saccharopine dehydrogenase (NADP+, L-lysine-forming) activity (ortholog); INVOLVED IN L-lysine catabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955479 3746003 3805835 - 102008622 AGCD01056301;AGCD01056302;AGCD01056303;GBDJ01423946;GBDK01279764;XM_013503294 XP_013358748 MODEL 8736566 protein-coding Cdr2l cerebellar degeneration related protein 2 like ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955553 1851338 1863772 + 102018231 AGCD01072902;AGCD01072903;GBBH01107303;GBDF01048762;XM_005412266 XP_005412323 MODEL 8773909 protein-coding LOC102009769 olfactory receptor 7G2-like NW_004955563 256431 260592 + 102009769 AGCD01074056;AGCD01074057;XM_005413198 XP_005413255 MODEL 8947779 pseudo LOC102022451 ubiquitin-conjugating enzyme E2 D3 pseudogene NW_004955451 15454957 15455313 - 102022451 AGCD01043609 MODEL 39132068 rrna 5S_rRNA 5S ribosomal RNA 8740892 protein-coding LOC102009003 glutamate receptor ionotropic, NMDA 2C NW_004956136 343 7674 - 102009003 AGCD01079116;GBCQ01125682;XM_005415170 XP_005415227 MODEL 39133945 misc_rna 7SK 7SK RNA 8868523 protein-coding Sofu1 sperm-oocyte fusion factor 1 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog) NW_004955494 688212 689634 - 102030644 AGCD01061383;GBCQ01060938;XM_005405379 XP_005405436 MODEL 8866196 trna Trnap-cgg transfer RNA proline (anticodon CGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955467;NW_004955442;NW_004955465;NW_004955462 8707836;14202081;13093914;9311560 8707907;14202152;13093985;9311631 +;+;+;- 101978809 AGCD01037806;AGCD01049336;AGCD01050584;AGCD01051466 MODEL 8759618 protein-coding LOC102004923 spindle pole body component 110-like NW_004955415 787950 980102 + 102004923 AGCD01015854;AGCD01015855;AGCD01015856;GBDF01123992;XM_005380548;XM_005380549;XM_013512192;XM_013512193;XM_013512194;XM_013512195;XR_260257 XP_005380605;XP_005380606;XP_013367646;XP_013367647;XP_013367648;XP_013367649 MODEL 8904416 ncrna LOC102003126 uncharacterized LOC102003126 NW_004955478 4555513 4561148 + 102003126 AGCD01055852;GBDF01157448;XR_001230854;XR_001230855 MODEL 39131871 rrna 5S_rRNA 5S ribosomal RNA 8729687 protein-coding Borcs5 BLOC-1 related complex subunit 5 INVOLVED IN axon development (ortholog); lysosome localization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN axon (ortholog); BORC complex (ortholog); cytoplasmic side of lysosomal membrane (ortholog) NW_004955413 9309766 9399378 + 102015707 AGCD01013902;AGCD01013903;GBCE01187874;XM_005378962;XM_005378964;XM_013511430;XM_013511431 XP_005379019;XP_005379021;XP_013366884;XP_013366885 MODEL 8891468 protein-coding Rsl24d1 ribosomal L24 domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955409 622561 632776 + 102011842 AGCD01009159;AGCD01009160;GBDI01018667;XM_005376610 XP_005376667 MODEL 8822344 protein-coding Acmsd aminocarboxymuconate semialdehyde decarboxylase ENCODES a protein that exhibits aminocarboxymuconate-semialdehyde decarboxylase activity (ortholog); carboxy-lyase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); negative regulation of quinolinate biosynthetic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); kidney failure (ortholog); Puromycin Aminonucleoside Nephrosis (ortholog); FOUND IN cytosol (ortholog) NW_004955440 2348434 2412706 + 102003806 AGCD01036206;AGCD01036207;GBCQ01033145;XM_005390746;XM_005390748;XM_005390749;XM_013517510;XM_013517511 XP_005390803;XP_005390805;XP_005390806;XP_013372964;XP_013372965 MODEL 8959207 protein-coding LOC102007088 uncharacterized LOC102007088 NW_004955459 3561454 3572591 - 102007088 AGCD01048015;GBDF01086912;XM_013521036 XP_013376490 MODEL 9042568 protein-coding Agxt alanine--glyoxylate and serine--pyruvate aminotransferase ENCODES a protein that exhibits amino acid binding (ortholog); identical protein binding (ortholog); L-alanine:glyoxylate transaminase activity (ortholog); INVOLVED IN glycine biosynthetic process (ortholog); glyoxylate catabolic process (ortholog); glyoxylate metabolic process (ortholog); PARTICIPATES IN alanine metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Acidoses (ortholog); atrioventricular block (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955542 710506 720564 - 102013449 AGCD01071475;GBDK01025977;XM_005411147 XP_005411204 MODEL 8979850 protein-coding Arcn1 archain 1 coat protein complex I subunit delta ENCODES a protein that exhibits structural molecule activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer maturation (ortholog); Golgi vesicle transport (ortholog); ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955412 19718534 19750340 + 102012840 AGCD01012972;AGCD01012973;AGCD01012974;AGCD01012975;AGCD01012976;AGCD01012977;GBDF01049215;XM_005378251 XP_005378308 MODEL 8952934 protein-coding Cd84 CD84 molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of granulocyte macrophage colony-stimulating factor production (ortholog); negative regulation of interleukin-10 production (ortholog); negative regulation of interleukin-18 production (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 12280467 12313976 - 102019259 AGCD01052149;GBDI01339680;XM_005400211 XP_005400268 MODEL 8788376 pseudo LOC102008246 olfactory receptor 5A1-like NW_004955511 3810447 3812052 - 102008246 AGCD01066476 MODEL 8809352 protein-coding Cc2d2a coiled-coil and C2 domain containing 2A INVOLVED IN axoneme assembly (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH anencephaly (ortholog); astigmatism (ortholog); Ataxia (ortholog); FOUND IN ciliary transition zone (ortholog); MKS complex (ortholog) NW_004955480 8404239 8514792 - 102017335 AGCD01056722;AGCD01056723;AGCD01056724;AGCD01056725;AGCD01056726;AGCD01056727;GBBH01188254;GBCE01065243;XM_005402527 XP_005402584 MODEL 39134212 misc_rna 7SK 7SK RNA 8833008 protein-coding Slc38a1 solute carrier family 38 member 1 ENCODES a protein that exhibits alanine:sodium symporter activity (ortholog); amino acid:sodium symporter activity (ortholog); glycine:sodium symporter activity (ortholog); INVOLVED IN amino acid import (ortholog); female pregnancy (ortholog); L-alpha-amino acid transmembrane transport (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); external side of apical plasma membrane (ortholog) NW_004955500 5393211 5468827 - 102011887 AGCD01063837;AGCD01063838;AGCD01063839;AGCD01063840;GBCC01020975;XM_005406597;XM_013505700;XR_001231494 XP_005406654;XP_013361154 MODEL 8857967 protein-coding Prkdc protein kinase, DNA-activated, catalytic subunit ENCODES a protein that exhibits DNA-dependent protein kinase activity (ortholog); double-stranded DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); B cell lineage commitment (ortholog); brain development (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN chromatin (ortholog); DNA-dependent protein kinase complex (ortholog); DNA-dependent protein kinase-DNA ligase 4 complex (ortholog) NW_004955454 7733697 7890896 - 102021844 AGCD01045304;AGCD01045305;AGCD01045306;AGCD01045307;AGCD01045308;AGCD01045309;GBDJ01356019;XM_005396037;XM_013520201;XM_013520202 XP_005396094;XP_013375655;XP_013375656 MODEL 8709367 protein-coding Alx3 ALX homeobox 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); embryonic hindlimb morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH frontonasal dysplasia (ortholog); frontonasal dysplasia 1 (ortholog); genetic disease (ortholog) NW_004955435 13584129 13594316 - 102015236 AGCD01033205;GBDF01222447;XM_005388911 XP_005388968 MODEL 8865495 ncrna LOC102014112 uncharacterized LOC102014112 NW_004955455 1017376 1026939 - 102014112 AGCD01045567;GBDF01192295;XR_262807 MODEL 8734318 pseudo LOC102012173 60S ribosomal protein L39 pseudogene NW_004955463 13487897 13488102 + 102012173 AGCD01049868;XM_005398412 MODEL 8888174 ncrna LOC102013742 uncharacterized LOC102013742 NW_004955430 2212051 2215118 - 102013742 AGCD01029160;GBDF01195932;XR_261410 MODEL 8873038 protein-coding Anp32e acidic nuclear phosphoprotein 32 family member E ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); phosphatase inhibitor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) NW_004955413 531716 550480 + 102018909 AGCD01013475;AGCD01013476;AGCD01013477;GBCB01056546;GBDF01190815;XM_013511470 XP_013366924 MODEL 9035385 protein-coding Cxcr1 C-X-C motif chemokine receptor 1 ENCODES a protein that exhibits interleukin-8 binding (ortholog); interleukin-8 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); interleukin-8-mediated signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); cerebrotendinous xanthomatosis (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN G protein-coupled receptor complex (ortholog) NW_004955453 15181027 15196224 + 102015802 AGCD01044886;GBDF01195511;XM_005395665;XM_013519957;XM_013519958;XM_013519959 XP_005395722;XP_013375411;XP_013375412;XP_013375413 MODEL 39134078 misc_rna 7SK 7SK RNA 8876132 protein-coding Il22 interleukin 22 INVOLVED IN response to glucocorticoid (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); asthma (ortholog); autoimmune hepatitis (ortholog); FOUND IN decoy receptor complex (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955458 14747339 14755602 - 102029269 AGCD01047846;GBDF01277454;XM_005397469;XM_013520847;XM_013520848 XP_005397526;XP_013376301;XP_013376302 MODEL 9020557 ncrna LOC102004925 uncharacterized LOC102004925 NW_004955478 8969460 9024925 - 102004925 AGCD01056049;GBBH01155294;XR_001230860;XR_001230861;XR_001230862;XR_001230863;XR_263711 MODEL 8905748 protein-coding Clec1b C-type lectin domain family 1 member B ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN platelet formation (ortholog); signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955413 7812750 7821620 - 102009821 AGCD01013831;AGCD01013832;GBBH01066126;XM_005378941 XP_005378998 MODEL 8810344 protein-coding Lpcat2 lysophosphatidylcholine acyltransferase 2 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-alkylglycerophosphocholine O-acetyltransferase activity (ortholog); INVOLVED IN membrane organization (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); platelet activating factor biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955433 13052480 13120197 + 102005957 AGCD01031674;AGCD01031675;AGCD01031676;GBDI01006652;GBDJ01353510;XM_005388319 XP_005388376 MODEL 8985510 protein-coding Wdr53 WD repeat domain 53 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955420 12694208 12714613 - 102013299 AGCD01020884;AGCD01020885;GBDI01358032;XM_005383136;XM_005383137;XM_005383138;XM_013513504 XP_005383193;XP_005383194;XP_005383195;XP_013368958 MODEL 9045840 protein-coding LOC102005986 cytochrome P450 2B6-like NW_004955642 41045 46562 - 102005986 AGCD01077714;AGCD01077715;GBBH01208704;XM_005415047 XP_005415104 MODEL 9009435 protein-coding LOC102007094 uncharacterized LOC102007094 NW_004955411 33570 60551 + 102007094 AGCD01011450;XM_013510711 XP_013366165 MODEL 8747432 pseudo LOC102004564 abl interactor 1 pseudogene NW_004955407 18718421 18719424 + 102004564 AGCD01007275 MODEL 8845135 protein-coding Plod2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 ENCODES a protein that exhibits procollagen glucosyltransferase activity (ortholog); procollagen-lysine 5-dioxygenase activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH Bone Neoplasms (ortholog); Breast Cancer, Familial (ortholog); Bruck syndrome (ortholog); FOUND IN cytoplasm (ortholog); rough endoplasmic reticulum membrane (ortholog) NW_004955474 11392163 11473918 + 102020659 AGCD01054622;AGCD01054623;AGCD01054624;GBDF01305945;GBDJ01137009;XM_005401440;XM_005401441 XP_005401497;XP_005401498 MODEL 8929827 pseudo LOC102004203 programmed cell death protein 5 pseudogene NW_004955543 543218 543599 + 102004203 AGCD01071590;XM_005411306 MODEL 8930882 protein-coding Erbb4 erb-b2 receptor tyrosine kinase 4 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac muscle tissue regeneration (ortholog); cell fate commitment (ortholog); cell migration (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); caveola (ortholog); dendrite (ortholog) NW_004955457 3177905 4236152 + 102026721 AGCD01046765;AGCD01046766;AGCD01046767;AGCD01046768;AGCD01046769;AGCD01046770;AGCD01046771;AGCD01046772;AGCD01046773;AGCD01046774;AGCD01046775;AGCD01046776;AGCD01046777;AGCD01046778;AGCD01046779;AGCD01046780;AGCD01046781;AGCD01046782;AGCD01046783;AGCD01046784;AGCD01046785;AGCD01046786;AGCD01046787;GBCQ01117703;GBCQ01117704;XM_005396937;XM_005396938;XM_005396939;XM_005396940;XM_013520736 XP_005396994;XP_005396995;XP_005396996;XP_005396997;XP_013376190 MODEL 8859718 protein-coding Dnaaf10 dynein axonemal assembly factor 10 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN RPAP3/R2TP/prefoldin-like complex (ortholog) NW_004955424 16706272 16727483 + 102023818 AGCD01024748;AGCD01024749;GBCE01024448;XM_005385674 XP_005385731 MODEL 39132070 rrna 5S_rRNA 5S ribosomal RNA 10327845 pseudo LOC102009773 Ig heavy chain V-III region 23-like NW_004955569 3800 4314 + 102009773 AGCD01074556 MODEL 8872080 protein-coding LOC102007481 UDP-glucuronosyltransferase 2A3-like NW_004955447 3273792 3279756 + 102007481 AGCD01040590;GBDF01017429;GBDF01017432;XM_013518565 XP_013374019 MODEL 9051278 protein-coding LOC102011817 40S ribosomal protein S27-like NW_004955444 12300883 12301137 - 102011817 AGCD01039067;XM_005392136 XP_005392193 MODEL 39133946 misc_rna 7SK 7SK RNA 8877429 protein-coding Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); oocyte differentiation (ortholog); oogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); hypogonadism (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955513 4767591 4771654 + 102020830 AGCD01066939;GBDF01225167;XM_005408545 XP_005408602 MODEL 9001914 protein-coding Aup1 AUP1 lipid droplet regulating VLDL assembly factor ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN autophagosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 11259288 11262413 + 102022511 AGCD01024559;GBDI01001881;XM_005385487;XM_005385488;XM_013514652;XM_013514653;XM_013514654 XP_005385544;XP_005385545;XP_013370106;XP_013370107;XP_013370108 MODEL 8943708 ncrna LOC102013376 uncharacterized LOC102013376 NW_004955453 7378233 7386961 + 102013376 AGCD01044743;GBDF01180127;XR_262716 MODEL 8745165 protein-coding Rcor2 REST corepressor 2 ENCODES a protein that exhibits enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955422 21102185 21111974 + 102025371 AGCD01023101;GBDF01277179;XM_005384656;XM_005384657;XM_013514350 XP_005384713;XP_005384714;XP_013369804 MODEL 8924276 protein-coding Cfap210 cilia and flagella associated protein 210 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH high grade glioma (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955449 4886108 4912371 + 102026817 AGCD01041902;GBCE01045363;XM_005393253 XP_005393310 MODEL 8921901 protein-coding Aco1 aconitase 1 ENCODES a protein that exhibits 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); aconitate hydratase activity (ortholog); INVOLVED IN citrate metabolic process (ortholog); intestinal absorption (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN doxorubicin response pathway; iron homeostasis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955472 3141473 3170959 - 102015311 AGCD01053504;GBBH01089727;XM_013522946 XP_013378400 MODEL 8950165 protein-coding Fign fidgetin, microtubule severing factor ASSOCIATED WITH Developmental Disease (ortholog); melanoma (ortholog); thymoma (ortholog); FOUND IN nuclear matrix (ortholog) NW_004955449 10271125 10400631 + 102015258 AGCD01042070;AGCD01042071;AGCD01042072;GBDF01297223;XM_005393306;XM_005393307;XM_013518797 XP_005393363;XP_005393364;XP_013374251 MODEL 8731093 ncrna LOC102018365 uncharacterized LOC102018365 NW_004955455 1202031 1214877 + 102018365 AGCD01045571;GBDK01265078;XR_262808 MODEL 8700035 pseudo LOC102022452 ubiquitin thioesterase OTUB1-like NW_004955403 808314 811093 - 102022452 AGCD01001708 MODEL 8727496 ncrna LOC102010963 uncharacterized LOC102010963 NW_004955450 6116015 6122123 - 102010963 AGCD01042519;GBDF01296262;XR_262533 MODEL 8945673 protein-coding Atg16l1 autophagy related 16 like 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); axonal transport (ortholog); corpus callosum development (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) NW_004955453 2884497 2917581 - 102010331 AGCD01044645;GBBH01208300;XM_005395353;XM_005395354;XM_005395355 XP_005395410;XP_005395411;XP_005395412 MODEL 39134213 misc_rna 7SK 7SK RNA 8862045 protein-coding Adck5 aarF domain containing kinase 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955454 3006851 3024430 + 102004555 AGCD01045047;AGCD01045048;GBDI01295068;XM_005395881;XM_005395882;XM_013520177 XP_005395938;XP_005395939;XP_013375631 MODEL 8898603 protein-coding Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ENCODES a protein that exhibits iron ion binding (ortholog); metal ion binding (ortholog); procollagen galactosyltransferase activity (ortholog); INVOLVED IN basement membrane assembly (ortholog); cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); ASSOCIATED WITH BCARD syndrome (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955456 16082424 16090773 + 102023777 AGCD01046689;GBDF01156007;XM_005396861;XM_005396862 XP_005396918;XP_005396919 MODEL 8854217 ncrna LOC102003132 uncharacterized LOC102003132 NW_004955417 30984825 30997985 + 102003132 AGCD01018637;GBDF01119746;XR_001233438;XR_001233439;XR_001233440;XR_001233441;XR_001233442 MODEL 8822606 pseudo LOC102014117 calcium uptake protein 3, mitochondrial pseudogene NW_004955458 1985879 1991150 + 102014117 AGCD01047209 MODEL 8782082 protein-coding C1r complement C1r ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); zymogen activation (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome periodontal type 1 (ortholog); Ehlers-Danlos syndrome periodontal type 2 (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); extracellular region (ortholog) NW_004955413 4652156 4660897 - 102011752 AGCD01013623;GBCE01007078;XM_005378856 XP_005378913 MODEL 8823245 pseudo LOC102010184 olfactory receptor 5A1-like NW_004955511 3897218 3898125 - 102010184 AGCD01066481 MODEL 39131872 rrna 5S_rRNA 5S ribosomal RNA 9043790 protein-coding Rsph1 radial spoke head component 1 INVOLVED IN axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); cervical cancer (ortholog); FOUND IN 9+2 motile cilium (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955407 39266888 39284972 + 102009802 AGCD01007824;GBDI01006193;XM_005375812;XM_005375813 XP_005375869;XP_005375870 MODEL 9053299 protein-coding Aatf apoptosis antagonizing transcription factor ENCODES a protein that exhibits leucine zipper domain binding (ortholog); protein kinase binding (ortholog); tau protein binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955451 929278 1033665 - 102027134 AGCD01042954;AGCD01042955;AGCD01042956;AGCD01042957;AGCD01042958;GBCQ01064782;XM_005393937;XM_005393938 XP_005393994;XP_005393995 MODEL 8918535 protein-coding Cdrt4 CMT1A duplicated region transcript 4 NW_004955467 2228017 2267693 + 102020100 AGCD01051306;GBDF01002361;XM_013522028;XM_013522029;XR_001236836;XR_001236837 XP_013377482;XP_013377483 MODEL 8861391 protein-coding Areg amphiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); epithelial cell proliferation involved in mammary gland duct elongation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955474 680212 689021 + 102006903 AGCD01054227;GBDK01177128;XM_005401313 XP_005401370 MODEL 8941499 ncrna LOC102004928 uncharacterized LOC102004928 NW_004955417 31446138 31470576 + 102004928 AGCD01018652;GBDI01165806;XR_001233455 MODEL 8791738 pseudo LOC102008247 anaphase-promoting complex subunit 7 pseudogene NW_004955430 15868219 15872040 - 102008247 AGCD01029620 MODEL 9066198 ncrna LOC102009007 uncharacterized LOC102009007 NW_004955404 50480603 50488989 + 102009007 AGCD01004531;GBDF01057260;XR_259345 MODEL 8818607 protein-coding Cc2d2b coiled-coil and C2 domain containing 2B NW_004955507 2160454 2262333 + 102012110 AGCD01065580;AGCD01065581;AGCD01065582;AGCD01065583;GBDK01197876;XM_005407556;XM_013506214;XM_013506215;XM_013506216;XM_013506217;XM_013506218;XM_013506219;XM_013506220;XM_013506221;XM_013506222;XM_013506223;XM_013506224 XP_005407613;XP_013361668;XP_013361669;XP_013361670;XP_013361671;XP_013361672;XP_013361673;XP_013361674;XP_013361675;XP_013361676;XP_013361677;XP_013361678 MODEL 8953516 pseudo LOC102008599 ATP synthase F(0) complex subunit C2, mitochondrial pseudogene NW_004955408 4475183 4478730 - 102008599 AGCD01008113 MODEL 15036847 trna Trnap-ggg transfer RNA proline (anticodon GGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978807 8789109 pseudo LOC102004207 crooked neck-like protein 1 NW_004955442 6826753 6831353 - 102004207 AGCD01037599 MODEL 39132120 rrna 5S_rRNA 5S ribosomal RNA 9018313 protein-coding Borcs6 BLOC-1 related complex subunit 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN lysosome localization (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); FOUND IN BORC complex (ortholog) NW_004955467 8766322 8769169 + 102022801 AGCD01051471;GBBH01198077;XM_005399428 XP_005399485 MODEL 9034454 protein-coding Alx4 ALX homeobox 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); HMG box domain binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); digestive tract development (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH Adenomatous Polyps (ortholog); amblyopia (ortholog); anisometropia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955422 3278615 3290799 + 102008120 AGCD01022507;GBCE01174422;XM_005384945 XP_005385002 MODEL 8853797 protein-coding Sgf29 SAGA complex associated factor 29 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); methylation-dependent protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN ATAC complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955493 6759426 6774796 + 102018505 AGCD01061137;GBCB01041570;XM_005405175;XM_005405176;XM_005405177 XP_005405232;XP_005405233;XP_005405234 MODEL 39134214 misc_rna 7SK 7SK RNA 8716787 protein-coding LOC102013743 olfactory receptor 4C6-like NW_004955511 4928189 4955200 + 102013743 AGCD01066539;GBCE01171519;XM_005408279;XM_013506517;XM_013506518 XP_005408336;XP_013361971;XP_013361972 MODEL 8843491 protein-coding Anpep alanyl aminopeptidase, membrane ENCODES a protein that exhibits alanyl aminopeptidase activity (ortholog); aminopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN angiotensin maturation (ortholog); metanephric proximal tubule development (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; glutathione metabolic pathway; glutathione synthase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN brush border membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); external side of plasma membrane (ortholog) NW_004955416 15415981 15442032 + 102025000 AGCD01017328;AGCD01017329;AGCD01017330;GBDJ01129227;XM_005381541;XM_005381542;XM_013512629 XP_005381598;XP_005381599;XP_013368083 MODEL 9066207 protein-coding Cxcr3 C-X-C motif chemokine receptor 3 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955475 11148928 11152313 - 102010362 AGCD01055143;GBDI01290732;XM_005401676 XP_005401733 MODEL 8818161 protein-coding Atg16l2 autophagy related 16 like 2 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); cytosol (ortholog) NW_004955414 18600904 18618048 - 102019160 AGCD01015285;GBDK01416285;XM_013511846;XM_013511847;XM_013511848;XM_013511849;XM_013511850;XR_001233128 XP_013367300;XP_013367301;XP_013367302;XP_013367303;XP_013367304 MODEL 8950801 protein-coding Adcy1 adenylate cyclase 1 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN axonogenesis (ortholog); cAMP biosynthetic process (ortholog); circadian rhythm (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 44 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon hillock (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955456 6833992 6930990 - 102013052 AGCD01046378;AGCD01046379;AGCD01046380;AGCD01046381;GBCB01061631;GBCB01061632;XM_005396644 XP_005396701 MODEL 8817378 ncrna LOC102013385 uncharacterized LOC102013385 NW_004955456 7020296 7021629 + 102013385 AGCD01046384;GBDF01208136;XR_262885 MODEL 8855176 protein-coding Agxt2 alanine--glyoxylate aminotransferase 2 ENCODES a protein that exhibits (R)-3-amino-2-methylpropionate:pyruvate transaminase activity (ortholog); beta-alanine:pyruvate transaminase activity (ortholog); L-alanine:glyoxylate transaminase activity (ortholog); INVOLVED IN glycine biosynthetic process (ortholog); glyoxylate catabolic process (ortholog); L-alanine catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Beta-Aminoisobutyric Acid, Urinary Excretion of (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955426 20102368 20142596 - 102006482 AGCD01026563;GBCQ01063829;XM_005386191 XP_005386248 MODEL 8705710 protein-coding LOC102005997 keratin-associated protein 20-2-like NW_004955407 30123405 30123560 + 102005997 AGCD01007628;XM_005375637 XP_005375694 MODEL 8830637 protein-coding Lpcat3 lysophosphatidylcholine acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN chylomicron assembly (ortholog); endoplasmic reticulum membrane organization (ortholog); intestinal stem cell homeostasis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955413 4571028 4605097 - 102011100 AGCD01013621;GBDK01076822;XM_005378854 XP_005378911 MODEL 8709558 protein-coding Cd86 CD86 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN B cell activation (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) NW_004955427 21375820 21436767 + 102024258 AGCD01027444;AGCD01027445;GBDK01357791;XM_013515233;XM_013515234;XM_013515236;XM_013515237 XP_013370687;XP_013370688;XP_013370690;XP_013370691 MODEL 8924851 protein-coding LOC102007097 olfactory receptor 8B3-like NW_004955412 25257775 25259655 - 102007097 AGCD01013143;XM_005378418 XP_005378475 MODEL 8711564 protein-coding Aco2 aconitase 2 ENCODES a protein that exhibits 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); aconitate hydratase activity (ortholog); INVOLVED IN citrate metabolic process (ortholog); isocitrate metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); acute myeloid leukemia (ortholog); acute porphyria (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955413 27027341 27065227 + 102019378 AGCD01014491;GBDF01000245;XM_005379352 XP_005379409 MODEL 9029519 protein-coding Cfap221 cilia and flagella associated protein 221 ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); motile cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955459 10070827 10192411 - 102018900 AGCD01048179;AGCD01048180;AGCD01048181;GBDJ01164802;XM_005397660;XM_005397661;XM_013521060 XP_005397717;XP_005397718;XP_013376514 MODEL 8850563 protein-coding Prkg1 protein kinase cGMP-dependent 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); cGMP binding (ortholog); cGMP-dependent protein kinase activity (ortholog); INVOLVED IN cell growth involved in cardiac muscle cell development (ortholog); cerebellum development (ortholog); collateral sprouting (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); amphetamine abuse (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955425 6176335 7335867 + 102005487 AGCD01025366;AGCD01025367;AGCD01025368;AGCD01025369;AGCD01025370;AGCD01025371;AGCD01025372;AGCD01025373;AGCD01025374;AGCD01025375;AGCD01025376;AGCD01025377;AGCD01025378;AGCD01025379;AGCD01025380;AGCD01025381;AGCD01025382;GBDK01040552;XM_005385905;XM_005385906 XP_005385962;XP_005385963 MODEL 9049882 protein-coding Erbin erbb2 interacting protein ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); negative regulation of monocyte chemotactic protein-1 production (ortholog); negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955446 3046268 3151796 - 102017075 AGCD01039998;AGCD01039999;AGCD01040000;AGCD01040001;AGCD01040002;GBBH01209360;GBDJ01086651;XM_013518424;XM_013518425;XM_013518427;XM_013518428;XM_013518429;XM_013518430;XM_013518431;XM_013518432 XP_013373878;XP_013373879;XP_013373881;XP_013373882;XP_013373883;XP_013373884;XP_013373885;XP_013373886 MODEL 8737535 pseudo LOC102009774 calmodulin-A pseudogene NW_004955573 459943 467278 + 102009774 AGCD01074980 MODEL 8699706 protein-coding Dnaaf11 dynein axonemal assembly factor 11 INVOLVED IN axonemal dynein complex assembly (ortholog); cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); double outlet right ventricle (ortholog); FOUND IN apical cytoplasm (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955461 7204165 7311524 - 102012512 AGCD01048917;GBDI01260030;XM_005398014;XM_005398015;XM_005398016;XM_013521348 XP_005398071;XP_005398072;XP_005398073;XP_013376802 MODEL 8838219 ncrna LOC102011818 uncharacterized LOC102011818 NW_004955567 1491834 1498408 + 102011818 AGCD01074476;GBDK01309694;XR_001232411;XR_001232412 MODEL 9027148 pseudo LOC102007484 arylacetamide deacetylase-like 2 pseudogene NW_004955448 3318723 3319795 - 102007484 AGCD01041327 MODEL 39133947 misc_rna 7SK 7SK RNA 8983042 protein-coding Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cell differentiation (ortholog); oocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955431 9874783 9952044 + 102015557 AGCD01030196;AGCD01030197;AGCD01030198;AGCD01030199;GBDF01039703;XM_013515730 XP_013371184 MODEL 8901070 protein-coding Il22ra1 interleukin 22 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-20 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH lung cancer (ortholog); lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); signaling receptor complex (ortholog) NW_004955452 3975597 3992809 - 102025865 AGCD01043962;GBDJ01315187;XM_005394795 XP_005394852 MODEL 8726211 protein-coding Aurka aurora kinase A ENCODES a protein that exhibits histone H3S10 kinase activity (ortholog); molecular function activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); centrosome cycle (ortholog); centrosome localization (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN axon hillock (ortholog); basolateral plasma membrane (ortholog); centrosome (ortholog) NW_004955445 2831073 2853151 + 102011371 AGCD01039369;GBDF01083611;XM_005392275;XM_013518333 XP_005392332;XP_013373787 MODEL 8807198 pseudo LOC102004568 poly(A) RNA polymerase GLD2 pseudogene NW_004955458 6342070 6359704 - 102004568 AGCD01047558;AGCD01047559 MODEL 8733588 protein-coding LOC102010185 olfactory receptor 4D10-like NW_004955511 4000616 4001551 + 102010185 AGCD01066486;XM_005408269 XP_005408326 MODEL 8779601 protein-coding Rsph10b radial spoke head 10 homolog B ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) NW_004955460 13791666 13840754 + 102024881 AGCD01048723;AGCD01048724;AGCD01048725;AGCD01048726;GBDJ01085522;XM_005397900;XM_013521161;XM_013521163 XP_005397957;XP_013376615;XP_013376617 MODEL 8942875 protein-coding Wdr54 WD repeat domain 54 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of receptor internalization (ortholog); regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955424 11358694 11362138 - 102003257 AGCD01024564;GBDK01237577;XM_005385517;XM_005385518;XM_005385519 XP_005385574;XP_005385575;XP_005385576 MODEL 8812203 protein-coding Abat 4-aminobutyrate aminotransferase ENCODES a protein that exhibits (S)-3-amino-2-methylpropionate:2-oxoglutarate transaminase activity (ortholog); 4-aminobutyrate:2-oxoglutarate transaminase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cerebellum development (ortholog); copulation (ortholog); exploration behavior (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN 4-aminobutyrate transaminase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955442 9422849 9516054 - 102018440 AGCD01037679;AGCD01037680;AGCD01037681;AGCD01037682;AGCD01037683;AGCD01037684;GBCQ01152006;XM_005391219;XM_005391220 XP_005391276;XP_005391277 MODEL 8998695 protein-coding Slc38a10 solute carrier family 38 member 10 INVOLVED IN bone development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955506 1724426 1767582 + 102006935 AGCD01065273;GBBH01032038;XM_005407280;XM_005407281;XM_005407282;XM_005407283;XM_005407284;XM_005407285;XM_013506030 XP_005407337;XP_005407338;XP_005407339;XP_005407340;XP_005407341;XP_005407342;XP_013361484 MODEL 8708001 ncrna LOC102018366 uncharacterized LOC102018366 NW_004955409 33777180 33840794 - 102018366 AGCD01010400;GBDF01249318;XR_259801 MODEL 8873695 ncrna LOC102010965 uncharacterized LOC102010965 NW_004955403 1991898 2019275 + 102010965 AGCD01001728;GBDF01163403;XR_001233151;XR_259135 MODEL 8770323 protein-coding LOC102012181 G2/mitotic-specific cyclin-B1-like NW_004955413 26407831 26409562 - 102012181 AGCD01014441;XM_013511379 XP_013366833 MODEL 8740940 protein-coding Ccar1 cell division cycle and apoptosis regulator 1 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear envelope lumen (ortholog); nucleoplasm (ortholog) NW_004955425 20878178 20923007 + 102010179 AGCD01025768;AGCD01025769;GBDF01159549;XM_005386001;XM_005386002;XM_005386003 XP_005386058;XP_005386059;XP_005386060 MODEL 39134079 misc_rna 7SK 7SK RNA 8800031 protein-coding Acod1 aconitate decarboxylase 1 ENCODES a protein that exhibits aconitate decarboxylase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cocaine (ortholog); cellular response to interferon-beta (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH esophageal carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); Invasive Breast Carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955404 30254934 30266898 - 102019764 AGCD01004002;GBDK01343918;XM_013516487;XM_013516490;XM_013516495;XM_013516501;XM_013516502;XM_013516504;XM_013516510;XM_013516514;XM_013516520 XP_013371941;XP_013371944;XP_013371949;XP_013371955;XP_013371956;XP_013371958;XP_013371964;XP_013371968;XP_013371974 MODEL 39132123 rrna 5S_rRNA 5S ribosomal RNA 9003256 protein-coding Clec20a C-type lectin domain containing 20A NW_004955406 17901044 17930323 - 102019565 AGCD01006016;GBDF01039499;XM_005374911;XM_005374912;XM_005374913;XM_005374914;XM_005374915;XM_005374916;XM_013521068 XP_005374968;XP_005374969;XP_005374970;XP_005374971;XP_005374972;XP_005374973;XP_013376522 MODEL 8831292 pseudo LOC102007485 BTB/POZ domain-containing protein 7 pseudogene NW_004955588 764940 776028 - 102007485 AGCD01076122 MODEL 8861009 protein-coding Dnaaf19 dynein axonemal assembly factor 19 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); determination of digestive tract left/right asymmetry (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); Kartagener syndrome (ortholog) NW_004955451 17690148 17693285 + 102018792 AGCD01043767;GBBH01124071;XM_005394546;XM_005394547;XM_005394548;XM_005394549;XM_013519374;XM_013519375;XM_013519376 XP_005394603;XP_005394604;XP_005394605;XP_005394606;XP_013374828;XP_013374829;XP_013374830 MODEL 8952206 protein-coding LOC102014118 serine protease 40-like NW_004955459 210829 216046 - 102014118 AGCD01047928;GBDF01008590;XM_005397546 XP_005397603 MODEL 8762968 protein-coding Rcor3 REST corepressor 3 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); transcription repressor complex (ortholog) NW_004955489 1016124 1059795 - 102014908 AGCD01059825;AGCD01059826;GBCB01020600;GBDF01155577;XM_013504486 XP_013359940 MODEL 8850450 protein-coding Cds1 CDP-diacylglycerol synthase 1 ENCODES a protein that exhibits phosphatidate cytidylyltransferase activity (ortholog); INVOLVED IN CDP-diacylglycerol biosynthetic process (ortholog); lipid droplet formation (ortholog); phosphatidylinositol biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955474 5057833 5104235 - 102030523 AGCD01054393;GBBH01126960;XM_013502782 XP_013358236 MODEL 8699973 protein-coding Adcy10 adenylate cyclase 10 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); ATPase binding (ortholog); bicarbonate binding (ortholog); INVOLVED IN cAMP biosynthetic process (ortholog); cellular response to carbon dioxide (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); astrocyte end-foot (ortholog) NW_004955462 9196984 9278850 + 102022369 AGCD01049333;AGCD01049334;AGCD01049335;GBDF01086065;XM_013521435;XM_013521436 XP_013376889;XP_013376890 MODEL 8830531 protein-coding LOC102004930 disintegrin and metalloproteinase domain-containing protein 1b-like NW_004955482 8479193 8490619 + 102004930 AGCD01057525;AGCD01057526;AGCD01057527;GBDF01005618;XM_005403178 XP_005403235 MODEL 9002611 protein-coding LOC102022458 translation initiation factor IF-2-like NW_004955405 16186365 16195618 + 102022458 AGCD01004963;GBDF01277426;XM_005374686 XP_005374743 MODEL 8742095 ncrna LOC102009009 uncharacterized LOC102009009 NW_004955452 14645767 14677079 + 102009009 AGCD01044474;AGCD01044475;AGCD01044476;GBDF01115467;XR_001236027 MODEL 9040298 protein-coding Ahctf1 AT-hook containing transcription factor 1 INVOLVED IN nuclear pore complex assembly (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); kinetochore (ortholog) NW_004955406 9687237 9754426 - 102012156 AGCD01005831;AGCD01005832;AGCD01005833;AGCD01005834;GBDF01053229;XM_005374795;XM_013520457;XM_013520466 XP_005374852;XP_013375911;XP_013375920 MODEL 8861954 protein-coding Fignl1 fidgetin like 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex destabilizing activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA recombinase disassembly (ortholog); double-strand break repair involved in meiotic recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Kidney Neoplasms (ortholog); lung cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); DNA repair complex (ortholog) NW_004955456 3588190 3594559 + 102028497 AGCD01046276;AGCD01046277;GBBH01071493;XM_005396606;XM_005396607;XM_005396608;XM_013520641 XP_005396663;XP_005396664;XP_005396665;XP_013376095 MODEL 9048631 protein-coding Cd8a CD8 subunit alpha ENCODES a protein that exhibits identical protein binding (ortholog); MHC class I protein complex binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cytotoxic T cell differentiation (ortholog); defense response to virus (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); amphetamine abuse (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955424 952595 979159 + 102014798 AGCD01024225;AGCD01024226;AGCD01024227;GBDJ01073200;XM_005385387;XM_005385388;XM_005385389;XM_005385390 XP_005385444;XP_005385445;XP_005385446;XP_005385447 MODEL 8902864 protein-coding LOC102008603 forkhead box protein L1 NW_004955460 8202937 8204916 + 102008603 AGCD01048513;GBDF01028920;XM_005397773 XP_005397830 MODEL 9045561 protein-coding Plp1 proteolipid protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); structural constituent of myelin sheath (ortholog); INVOLVED IN AMPA selective glutamate receptor signaling pathway (ortholog); astrocyte development (ortholog); axon development (ortholog); ASSOCIATED WITH Chronic Relapsing Experimental Autoimmune Encephalomyelitis (ortholog); epilepsy (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN integrin alphav-beta3 complex (ortholog); myelin sheath (ortholog); plasma membrane (ortholog) NW_004955548 781522 797246 + 102028341 AGCD01072341;GBDK01179399;XM_005411997;XM_005411998 XP_005412054;XP_005412055 MODEL 8847922 protein-coding LOC102003136 histone H2A type 1-A INVOLVED IN chromatin organization (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955483 1358562 1359048 + 102003136 AGCD01057645;GBDF01054005;XM_005403345 XP_005403402 MODEL 8907916 protein-coding Erc1 ELKS/RAB6-interacting/CAST family member 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); small GTPase binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955454 3584910 4036276 + 102023327 AGCD01045094;AGCD01045095;AGCD01045096;AGCD01045097;AGCD01045098;AGCD01045099;AGCD01045100;AGCD01045101;AGCD01045102;AGCD01045103;AGCD01045104;AGCD01045105;AGCD01045106;AGCD01045107;AGCD01045108;GBBH01147455;XM_005395944;XM_005395945;XM_005395946;XM_005395947;XM_005395948;XM_005395949;XM_013520185;XM_013520186;XM_013520187;XM_013520189;XM_013520190;XM_013520191;XM_013520192 XP_005396001;XP_005396002;XP_005396003;XP_005396004;XP_005396005;XP_005396006;XP_013375639;XP_013375640;XP_013375641;XP_013375643;XP_013375644;XP_013375645;XP_013375646 MODEL 8709873 protein-coding Borcs7 BLOC-1 related complex subunit 7 INVOLVED IN axon development (ortholog); lysosome localization (ortholog); motor behavior (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); neuroaxonal dystrophy (ortholog); schizophrenia (ortholog); FOUND IN BORC complex (ortholog); lysosome (ortholog) NW_004955485 7605277 7615924 - 102010267 AGCD01058665;GBCB01024707;XM_005403820 XP_005403877 MODEL 9044426 protein-coding C1rl complement C1r subcomponent like ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955413 4663643 4670454 - 102012081 AGCD01013623;GBDI01312342;XM_005378857;XM_005378858 XP_005378914;XP_005378915 MODEL 8719320 ncrna LOC102013746 uncharacterized LOC102013746 NW_004955513 5355935 5367253 + 102013746 AGCD01066968;GBCB01130230;XR_001231758;XR_264483;XR_264484 MODEL 9067547 protein-coding Antkmt adenine nucleotide translocase lysine methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955442 16482450 16484164 - 102014617 AGCD01037901;GBCB01003023;XM_013517756;XM_013517757;XM_013517758 XP_013373210;XP_013373211;XP_013373212 MODEL 8704464 protein-coding Son SON DNA and RNA binding protein ENCODES a protein that exhibits RNA binding (ortholog); RS domain binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); mitotic cytokinesis (ortholog); mRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Apnea (ortholog); FOUND IN nuclear speck (ortholog) NW_004955407 32974656 33007073 + 102016237 AGCD01007692;AGCD01007693;GBDF01053041;XM_013504280;XM_013504282;XM_013504287;XM_013504291;XM_013504293 XP_013359734;XP_013359736;XP_013359741;XP_013359745;XP_013359747 MODEL 8970740 protein-coding LOC102008248 retinal dehydrogenase 1 NW_004955512 5877696 5918693 + 102008248 AGCD01066780;GBCQ01010586;GBDI01006910;XM_013506548 XP_013362002 MODEL 8857278 protein-coding Acot11 acyl-CoA thioesterase 11 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); response to cold (ortholog); response to temperature stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) NW_004955464 4741504 4782383 - 102028066 AGCD01049994;GBBH01110409;XM_005398521;XM_005398524;XM_013521712;XM_013521713 XP_005398578;XP_005398581;XP_013377166;XP_013377167 MODEL 8820372 pseudo LOC102010186 disks large-associated protein 5 pseudogene NW_004955430 21698565 21699103 + 102010186 AGCD01029774 MODEL 8889321 protein-coding Atg2a autophagy related 2A ENCODES a protein that exhibits lipid transfer activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); organelle membrane contact site (ortholog); phagophore assembly site membrane (ortholog) NW_004955422 20261749 20290879 + 102024580 AGCD01023072;AGCD01023073;GBCB01050945;XM_005384542;XM_005384543;XM_005384544;XM_005384547;XM_013513964;XM_013513965;XM_013513966 XP_005384599;XP_005384600;XP_005384601;XP_005384604;XP_013369418;XP_013369419;XP_013369420 MODEL 8849679 ncrna LOC102006000 uncharacterized LOC102006000 NW_004955408 27481149 27486049 + 102006000 AGCD01008679;GBDF01076903;XR_259721 MODEL 8809307 protein-coding Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); protein K11-linked ubiquitination (ortholog); protein K33-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955523 818535 874189 + 102017051 AGCD01068481;AGCD01068482;AGCD01068483;AGCD01068484;AGCD01068485;GBDF01006052;XM_005409388;XM_005409389;XM_005409390;XM_013507172 XP_005409445;XP_005409446;XP_005409447;XP_013362626 MODEL 8839520 protein-coding Lpcat4 lysophosphatidylcholine acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylethanolamine acyl-chain remodeling (ortholog); phosphatidylserine acyl-chain remodeling (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955416 251057 257379 + 102003235 AGCD01016791;GBBH01034974;GBBH01034975;XM_013512655 XP_013368109 MODEL 8956642 protein-coding Slc38a11 solute carrier family 38 member 11 ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955449 9126231 9176698 + 102014098 AGCD01042037;GBDK01335030;XM_005393302;XM_005393303 XP_005393359;XP_005393360 MODEL 8970434 ncrna LOC102022464 uncharacterized LOC102022464 NW_004955407 26752371 26760950 - 102022464 AGCD01007537;GBDF01242626;XR_001231703;XR_259588 MODEL 8921602 protein-coding Prkg2 protein kinase cGMP-dependent 2 ENCODES a protein that exhibits cGMP-dependent protein kinase activity (ortholog); identical protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog) NW_004955433 5286594 5387571 - 102027779 AGCD01031498;GBDK01324335;XM_005388221;XM_005388222;XM_005388223;XM_013516090 XP_005388278;XP_005388279;XP_005388280;XP_013371544 MODEL 9055027 pseudo LOC102011820 kelch repeat and BTB domain-containing protein 2 pseudogene NW_004955446 5926616 5937581 - 102011820 AGCD01040081 MODEL 8947304 protein-coding Alyref Aly/REF export factor ENCODES a protein that exhibits C5-methylcytidine-containing RNA reader activity (ortholog); molecular adaptor activity (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA metabolic process (ortholog); RNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955506 1278230 1282064 + 102025269 AGCD01065254;AGCD01065255;GBDF01049120;XM_013506125 XP_013361579 MODEL 39134215 misc_rna 7SK 7SK RNA 39133948 misc_rna 7SK 7SK RNA 8905245 protein-coding Sgip1 SH3GL interacting endocytic adaptor 1 ENCODES a protein that exhibits microtubule binding (ortholog); phospholipid binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN energy homeostasis (ortholog); plasma membrane tubulation (ortholog); positive regulation of eating behavior (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); intellectual disability (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) NW_004955423 24155401 24353166 - 102019712 AGCD01024031;AGCD01024032;AGCD01024033;AGCD01024034;AGCD01024035;GBDK01397860;XM_013514516;XM_013514517;XM_013514518;XM_013514519;XM_013514520 XP_013369970;XP_013369971;XP_013369972;XP_013369973;XP_013369974 MODEL 9065681 protein-coding LOC102013387 olfactory receptor 10A2-like NW_004955458 2450590 2451552 - 102013387 AGCD01047233;XM_005397241 XP_005397298 MODEL 8702540 protein-coding Il22ra2 interleukin 22 receptor subunit alpha 2 ENCODES a protein that exhibits interleukin-22 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); decoy receptor complex (ortholog) NW_004955436 22208267 22219667 + 102019953 AGCD01034087;XM_005389281 XP_005389338 MODEL 8815049 protein-coding Cxcr4 C-X-C motif chemokine receptor 4 ENCODES a protein that exhibits actin binding (ortholog); C-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); ameboidal-type cell migration (ortholog); aorta development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; hypoxia inducible factor pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bone Metastasis (ortholog); Breast Neoplasms (ortholog); FOUND IN anchoring junction (ortholog); cell leading edge (ortholog); cell surface (ortholog) NW_004955440 3456165 3460024 - 102011479 AGCD01036242;GBBH01062692;XM_005390768 XP_005390825 MODEL 8805946 protein-coding Aurkaip1 aurora kinase A interacting protein 1 INVOLVED IN positive regulation of proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); sarcoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955486 9437511 9438945 + 102022196 AGCD01059185;GBBH01091603;XM_005404225;XM_005404226;XM_005404227;XM_005404228 XP_005404282;XP_005404283;XP_005404284;XP_005404285 MODEL 8925274 protein-coding Dnaaf2 dynein axonemal assembly factor 2 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium-dependent cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ciliary Motility Disorders (ortholog); Kartagener syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein folding chaperone complex (ortholog) NW_004955409 13019941 13028378 + 102029154 AGCD01009586;AGCD01009587;GBDK01015151;XM_005376838 XP_005376895 MODEL 8712506 ncrna LOC102007099 uncharacterized LOC102007099 NW_004955413 26714 54739 + 102007099 AGCD01013432;AGCD01013433;AGCD01013434;AGCD01013435;GBDF01192955;XR_001232930;XR_260037 MODEL 8796653 protein-coding LOC102004209 uncharacterized LOC102004209 NW_004955444 19152362 19215916 - 102004209 AGCD01039271;AGCD01039272;AGCD01039273;AGCD01039274;XM_005392186 XP_005392243 MODEL 9065482 protein-coding Abca1 ATP binding cassette subfamily A member 1 ENCODES a protein that exhibits apolipoprotein A-I binding (ortholog); apolipoprotein A-I receptor activity (ortholog); apolipoprotein binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cholesterol (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN altered reverse cholesterol transport pathway; retinol metabolic pathway; reverse cholesterol transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955419 21553863 21681626 + 102029865 AGCD01020281;GBBH01213940;XM_005382782;XM_005382783 XP_005382839;XP_005382840 MODEL 8916034 pseudo LOC102010187 glycerol-3-phosphate acyltransferase 3 pseudogene NW_004955512 1355820 1356600 + 102010187 AGCD01066640 MODEL 9042426 ncrna LOC102009778 uncharacterized LOC102009778 NW_004955402 5585104 5592598 - 102009778 AGCD01000137;GBDF01225737;XR_259030 MODEL 39131873 rrna 5S_rRNA 5S ribosomal RNA 9037393 trna Trnap-ugg transfer RNA proline (anticodon UGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955530;NW_004955449;NW_004955414;NW_004955442;NW_004955550 133690;1433235;15652077;14208532;1505328 133761;1433306;15652148;14208603;1505399 +;+;+;-;+ 101978808 AGCD01015187;AGCD01037806;AGCD01041800;AGCD01069830;AGCD01072578 MODEL 9045102 protein-coding Sorbs1 sorbin and SH3 domain containing 1 ENCODES a protein that exhibits insulin receptor binding (ortholog); protein kinase binding (ortholog); signaling receptor complex adaptor activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cellular response to insulin stimulus (ortholog); focal adhesion assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN adherens junction (ortholog); cell-substrate junction (ortholog); cytoskeleton (ortholog) NW_004955507 1622567 1849047 - 102007575 AGCD01065569;AGCD01065570;AGCD01065571;AGCD01065572;AGCD01065573;GBCE01159755;XM_013506166;XM_013506167;XM_013506168;XM_013506169;XM_013506170;XM_013506171;XM_013506173;XM_013506174;XM_013506175;XM_013506176;XM_013506177;XM_013506178;XM_013506179;XM_013506180;XM_013506181;XM_013506182;XM_013506183;XM_013506184;XM_013506185;XM_013506186;XM_013506187;XM_013506188;XM_013506189 XP_013361620;XP_013361621;XP_013361622;XP_013361623;XP_013361624;XP_013361625;XP_013361627;XP_013361628;XP_013361629;XP_013361630;XP_013361631;XP_013361632;XP_013361633;XP_013361634;XP_013361635;XP_013361636;XP_013361637;XP_013361638;XP_013361639;XP_013361640;XP_013361641;XP_013361642;XP_013361643 MODEL 8759254 protein-coding Adcy2 adenylate cyclase 2 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); adenylate cyclase binding (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN adenosine signaling pathway; dopamine signaling pathway via D1 family of receptors; endothelin signaling pathway; ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955504 4990634 5376990 + 102017587 AGCD01064892;AGCD01064893;AGCD01064894;AGCD01064895;AGCD01064896;AGCD01064897;GBCB01003732;XM_005407072 XP_005407129 MODEL 8838226 pseudo LOC102012184 U1 small nuclear ribonucleoprotein A pseudogene NW_004955413 587042 587756 + 102012184 AGCD01013481 MODEL 39134080 misc_rna 7SK 7SK RNA 39132125 rrna 5S_rRNA 5S ribosomal RNA 8876927 pseudo LOC102004569 60S ribosomal protein L30-like NW_004955409 9047353 9047699 - 102004569 AGCD01009428 MODEL 9054941 pseudo LOC102007487 uncharacterized LOC102007487 NW_004955402 44529952 44533463 + 102007487 AGCD01001118 MODEL 8974797 pseudo LOC102014125 bleomycin hydrolase pseudogene NW_004955467 12359001 12362302 + 102014125 AGCD01051631 MODEL 8756559 protein-coding Clec3a C-type lectin domain family 3 member A ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955522 1203559 1211562 + 102024945 AGCD01068357;XM_005409341 XP_005409398 MODEL 8994070 pseudo LOC102013751 prefoldin subunit 4 pseudogene NW_004955435 13502447 13502856 + 102013751 AGCD01033203 MODEL 8780783 protein-coding C1s complement C1s ENCODES a protein that exhibits identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); glial cell differentiation (ortholog); protein maturation (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); autoimmune hepatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); extracellular region (ortholog) NW_004955413 4620450 4630860 + 102011424 AGCD01013621;GBDF01017372;XM_005378855 XP_005378912 MODEL 9034210 protein-coding Rsph14 radial spoke head 14 homolog ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN radial spoke (ortholog) NW_004955455 7491693 7574257 - 102025655 AGCD01045859;AGCD01045860;AGCD01045861;GBCE01089469;XM_005396368 XP_005396425 MODEL 8787342 protein-coding Wdr55 WD repeat domain 55 INVOLVED IN rRNA processing (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955418 33237 37676 - 102025242 AGCD01018664;GBCQ01151900;XM_005382003 XP_005382060 MODEL 8990685 ncrna LOC102006003 uncharacterized LOC102006003 NW_004955409 4395307 4403847 + 102006003 AGCD01009288;XR_259753 MODEL 8838403 protein-coding LOC102018376 apolipoprotein L2-like NW_004955413 22780940 22803083 - 102018376 AGCD01014317;GBDJ01239605;XM_013511518 XP_013366972 MODEL 8927001 protein-coding Atg2b autophagy related 2B ENCODES a protein that exhibits lipid transfer activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog); phagophore assembly site membrane (ortholog) NW_004955438 18080641 18153490 - 102022123 AGCD01035464;GBCQ01155159;XM_005390394;XM_005390396;XM_013517180 XP_005390451;XP_005390453;XP_013372634 MODEL 8897858 protein-coding LOC102004931 olfactory receptor 1L6-like NW_004955419 5194803 5195732 - 102004931 AGCD01019788;XM_005382521 XP_005382578 MODEL 9007053 protein-coding LOC102010966 uncharacterized LOC102010966 NW_004955450 12785559 12807014 + 102010966 AGCD01042708;AGCD01042709;GBDJ01327161;XM_013518835 XP_013374289 MODEL 9064356 pseudo LOC102008604 calcyclin-binding protein pseudogene NW_004955460 11101580 11102535 - 102008604 AGCD01048629;XR_263056 MODEL 8729703 protein-coding Fignl2 fidgetin like 2 INVOLVED IN microtubule severing (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell leading edge (ortholog) NW_004955547 2205614 2234417 - 102016852 AGCD01072261;AGCD01072262;AGCD01072263;AGCD01072264;GBDK01115749;XM_005411962 XP_005412019 MODEL 8704375 protein-coding Ccar2 cell cycle and apoptosis regulator 2 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN mitochondrial fragmentation involved in apoptotic process (ortholog); negative regulation of cell growth (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Wallerian Degeneration (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); DBIRD complex (ortholog) NW_004955403 46027997 46042154 + 102013241 AGCD01002849;GBDF01085278;XM_005373683;XM_005373684;XM_005373685 XP_005373740;XP_005373741;XP_005373742 MODEL 8906626 pseudo LOC102022468 NHP2-like protein 1 pseudogene NW_004955408 13974627 13976107 - 102022468 AGCD01008379 MODEL 8942963 protein-coding Plp2 proteolipid protein 2 ENCODES a protein that exhibits chemokine binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955543 658617 662441 + 102009544 AGCD01071597;AGCD01071598;GBDK01020755;GBDK01020756;XM_005411327 XP_005411384 MODEL 10100650 pseudo LOC102003142 Ig heavy chain V-III region 23-like NW_004955487 14752 15297 - 102003142 AGCD01059204 MODEL 8706130 protein-coding Abca12 ATP binding cassette subfamily A member 12 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); ATPase-coupled intramembrane lipid carrier activity (ortholog); lipid carrier activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); ceramide transport (ortholog); corneocyte desquamation (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog); autosomal recessive congenital ichthyosis 4A (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); epidermal lamellar body (ortholog) NW_004955457 885941 1062713 + 102020422 AGCD01046716;AGCD01046717;AGCD01046718;GBCQ01127755;XM_013520777 XP_013376231 MODEL 8883716 protein-coding Prkn parkin RBR E3 ubiquitin protein ligase ENCODES a protein that exhibits actin binding (ortholog); beta-catenin binding (ortholog); cullin family protein binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); aggresome assembly (ortholog); autophagy of mitochondrion (ortholog); PARTICIPATES IN altered mitochondrial autophagy pathway; mitochondrial autophagy pathway; Parkinson's disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); autistic disorder (ortholog); FOUND IN aggresome (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955439 18664230 19953358 + 102007700 AGCD01036062;AGCD01036063;AGCD01036064;AGCD01036065;AGCD01036066;AGCD01036067;AGCD01036068;AGCD01036069;AGCD01036070;AGCD01036071;AGCD01036072;AGCD01036073;AGCD01036074;AGCD01036075;AGCD01036076;AGCD01036077;AGCD01036078;AGCD01036079;AGCD01036080;AGCD01036081;AGCD01036082;AGCD01036083;AGCD01036084;AGCD01036085;AGCD01036086;AGCD01036087;AGCD01036088;AGCD01036089;AGCD01036090;AGCD01036091;AGCD01036092;AGCD01036093;AGCD01036094;AGCD01036095;AGCD01036096;GBDF01253845;XM_005390686;XM_005390687;XM_005390688;XM_005390689 XP_005390743;XP_005390744;XP_005390745;XP_005390746 MODEL 8720757 protein-coding Amacr alpha-methylacyl-CoA racemase ENCODES a protein that exhibits alpha-methylacyl-CoA racemase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH adenoma (ortholog); alpha-methylacyl-CoA racemase deficiency (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); peroxisome (ortholog) NW_004955426 19570179 19580920 - 102028990 AGCD01026549;GBCB01061062;XM_005386170;XM_005386171 XP_005386227;XP_005386228 MODEL 8916974 protein-coding Rcsd1 RCSD domain containing 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955462 9321624 9383962 - 102022892 AGCD01049337;GBDI01185598;XM_005398223;XM_005398224;XM_013521437 XP_005398280;XP_005398281;XP_013376891 MODEL 8918055 protein-coding Borcs8 BLOC-1 related complex subunit 8 INVOLVED IN heart development (ortholog); ASSOCIATED WITH NEURODEGENERATION, INFANTILE-ONSET, WITH OPTIC ATROPHY AND BRAIN ABNORMALITIES (ortholog); FOUND IN BORC complex (ortholog) NW_004955524 2641907 2646275 + 102008656 AGCD01068827;GBDF01046628;XM_005409618;XM_005409619;XM_013507215 XP_005409675;XP_005409676;XP_013362669 MODEL 9057826 protein-coding Erc2 ELKS/RAB6-interacting/CAST family member 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of presynaptic cytosolic calcium ion concentration (ortholog); synapse organization (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); Golgi-associated vesicle (ortholog) NW_004955430 5345191 6308909 - 102008018 AGCD01029260;AGCD01029261;AGCD01029262;AGCD01029263;AGCD01029264;AGCD01029265;AGCD01029266;AGCD01029267;AGCD01029268;AGCD01029269;AGCD01029270;AGCD01029271;AGCD01029272;AGCD01029273;AGCD01029274;AGCD01029275;AGCD01029276;AGCD01029277;AGCD01029278;AGCD01029279;AGCD01029280;AGCD01029281;AGCD01029282;AGCD01029283;AGCD01029284;AGCD01029285;GBDI01215309;XM_005387385;XM_005387388;XM_013515684;XM_013515685;XM_013515686;XM_013515687;XM_013515688;XM_013515689;XM_013515690;XR_001234567 XP_005387442;XP_005387445;XP_013371138;XP_013371139;XP_013371140;XP_013371141;XP_013371142;XP_013371143;XP_013371144 MODEL 8832187 pseudo LOC102008250 cytochrome c oxidase assembly protein COX16 homolog, mitochondrial pseudogene NW_004955434 4045849 4046615 - 102008250 AGCD01032154;XM_005388576;XM_005388577 MODEL 8863341 protein-coding Antxr1 ANTXR cell adhesion molecule 1 ENCODES a protein that exhibits actin filament binding (ortholog); collagen binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel development (ortholog); negative regulation of extracellular matrix assembly (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); filopodium membrane (ortholog) NW_004955424 15820734 16034278 - 102017139 AGCD01024730;AGCD01024731;AGCD01024732;AGCD01024733;AGCD01024734;AGCD01024735;AGCD01024736;GBBH01227748;GBCE01074216;XM_013514693 XP_013370147 MODEL 8734119 protein-coding Il23a interleukin 23 subunit alpha ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-23 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); defense response to Gram-negative bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Amebic Liver Abscess (ortholog); Animal Toxoplasmosis (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); interleukin-23 complex (ortholog); interleukin-23 receptor complex (ortholog) NW_004955458 3946964 3949180 + 102008189 AGCD01047355;GBDF01073810;XM_005397309 XP_005397366 MODEL 8793967 ncrna LOC102009015 uncharacterized LOC102009015 NW_004955407 17180370 17193372 + 102009015 AGCD01007241;XR_259563 MODEL 8837124 protein-coding Ahcy adenosylhomocysteinase ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); adenosylselenohomocysteinase activity (ortholog); adenyl nucleotide binding (ortholog); INVOLVED IN chronic inflammatory response to antigenic stimulus (ortholog); circadian sleep/wake cycle (ortholog); modified amino acid catabolic process (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocysteine metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); amino acid metabolic disorder (ortholog); Animal Disease Models (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) NW_004955422 26992295 27013100 + 102024352 AGCD01023310;AGCD01023311;GBBH01000893;XM_005384832 XP_005384889 MODEL 8776752 protein-coding Lpgat1 lysophosphatidylglycerol acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); 2-acylglycerophosphocholine O-acyltransferase activity (ortholog); lysophosphatidylethanolamine acyltransferase activity (ortholog); INVOLVED IN phosphatidylethanolamine acyl-chain remodeling (ortholog); positive regulation of fatty acid biosynthetic process (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955406 5441923 5506575 + 102024422 AGCD01005725;GBDF01084224;GBDJ01317991;XM_013520199 XP_013375653 MODEL 8909067 protein-coding Cd8b CD8 subunit beta INVOLVED IN T cell activation (ortholog); T cell receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955424 922916 939469 + 102014463 AGCD01024223;GBDK01430415;XM_005385386 XP_005385443 MODEL 8716803 protein-coding Slc38a12 solute carrier family 38 member 12 ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955553 1664464 1726965 + 102014614 AGCD01072893;AGCD01072894;AGCD01072895;AGCD01072896;AGCD01072897;GBDF01039977;XM_005412255;XM_005412256;XM_013508654;XM_013508655 XP_005412312;XP_005412313;XP_013364108;XP_013364109 MODEL 9017153 pseudo LOC102009783 60S ribosomal protein L23a pseudogene NW_004955402 42724840 42797870 + 102009783 AGCD01001045;AGCD01001046;AGCD01001047;AGCD01001048;AGCD01001049;XR_259084 MODEL 8803977 protein-coding Cfap251 cilia and flagella associated protein 251 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Asthenozoospermia (ortholog); cervical cancer (ortholog); FOUND IN sperm end piece (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955482 6508563 6553561 - 102030197 AGCD01057399;AGCD01057400;AGCD01057401;AGCD01057402;GBDF01005425;GBDJ01271432;XM_013503582 XP_013359036 MODEL 8974001 protein-coding LOC102012188 vomeronasal type-1 receptor 90-like NW_004955414 14997711 14998679 - 102012188 AGCD01015167;XM_005380441 XP_005380498 MODEL 39134081 misc_rna 7SK 7SK RNA 9034410 protein-coding Sgk1 serum/glucocorticoid regulated kinase 1 ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to aldosterone (ortholog); cellular response to insulin stimulus (ortholog); DNA damage response (ortholog); PARTICIPATES IN glucocorticoid signaling pathway; insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN nuclear speck (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955439 2399992 2406587 + 102006075 AGCD01035643;AGCD01035644;GBCE01001862;GBDK01016728;XM_013517384 XP_013372838 MODEL 9060037 protein-coding Cds2 CDP-diacylglycerol synthase 2 ENCODES a protein that exhibits phosphatidate cytidylyltransferase activity (ortholog); INVOLVED IN CDP-diacylglycerol biosynthetic process (ortholog); lipid droplet formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955415 15762672 15806454 + 102011305 AGCD01016357;AGCD01016358;AGCD01016359;GBBH01034985;GBCE01054212;XM_005380829 XP_005380886 MODEL 8806604 protein-coding Acot12 acyl-CoA thioesterase 12 ENCODES a protein that exhibits acetyl-CoA hydrolase activity (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); acyl-CoA metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); liver cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955418 28829316 28872629 + 102012861 AGCD01019445;GBCQ01154601;XM_005382310 XP_005382367 MODEL 8792603 protein-coding Cxcr5 C-X-C motif chemokine receptor 5 INVOLVED IN leukocyte chemotaxis (ortholog); lymph node development (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH primary biliary cholangitis (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955412 20016768 20031635 + 102020318 AGCD01012992;GBBH01107031;XM_005378282 XP_005378339 MODEL 8974484 protein-coding Ambn ameloblastin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN cell adhesion (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); amblyopia (ortholog); amelogenesis imperfecta type 1F (ortholog) NW_004955447 2363240 2374827 - 102025523 AGCD01040538;XM_005392786;XM_013518494 XP_005392843;XP_013373948 MODEL 8710259 protein-coding Prkra protein activator of interferon induced protein kinase EIF2AK2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to oxidative stress (ortholog); ear development (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955403 18394609 18410381 + 102027598 AGCD01002099;GBDF01113358;GBDK01432396;XM_013512630 XP_013368084 MODEL 9032975 protein-coding Rsph3 radial spoke head 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cilium (ortholog) NW_004955439 3510076 3533924 + 102009763 AGCD01035678;GBDF01004160;XM_005415341 XP_005415398 MODEL 9001350 protein-coding C2 complement C2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, classical pathway (ortholog); ASSOCIATED WITH age related macular degeneration 14 (ortholog); Alzheimer's disease (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN cell surface (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); symbiont cell surface (ortholog) NW_004955437 449171 460898 + 102004317 AGCD01034137;GBCE01029038;XM_005389395 XP_005389452 MODEL 8907958 protein-coding Wdr59 WD repeat domain 59 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN GATOR2 complex (ortholog); lysosomal membrane (ortholog) NW_004955484 2576505 2668001 + 102024115 AGCD01058120;AGCD01058121;AGCD01058122;GBDF01195114;XM_005403454;XM_005403455 XP_005403511;XP_005403512 MODEL 8966528 ncrna LOC102010190 uncharacterized LOC102010190 NW_004955520 1134654 1136351 + 102010190 AGCD01068044;GBCQ01105007;XR_001231874;XR_264583 MODEL 8957362 protein-coding Arf1 ARF GTPase 1 ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN actin filament organization (ortholog); COPI-coated vesicle budding (ortholog); dendritic spine organization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell leading edge (ortholog); COPI-coated vesicle (ortholog); cytoplasmic side of trans-Golgi network membrane (ortholog) NW_004955581 319942 335112 - 102015903 AGCD01075667;GBDF01010336;XM_005414242 XP_005414299 MODEL 8943199 protein-coding LOC102004932 histone H2A type 1 NW_004955483 982626 983142 + 102004932 AGCD01057638;XM_013503792 XP_013359246 MODEL 8943653 ncrna LOC102008606 uncharacterized LOC102008606 NW_004955410 29146901 29160996 - 102008606 AGCD01011276;GBDF01148292;XR_001232701;XR_001232702 MODEL 39133949 misc_rna 7SK 7SK RNA 8968029 pseudo LOC102004571 PEST proteolytic signal-containing nuclear protein-like NW_004955409 13992640 13993276 - 102004571 AGCD01009631 MODEL 8838142 protein-coding Cd9 CD9 molecule ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955413 3891874 3924065 + 102011638 AGCD01013589;GBBH01004017;XM_005378756 XP_005378813 MODEL 8957539 protein-coding Sorbs2 sorbin and SH3 domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cell growth involved in cardiac muscle cell development (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955403 23295887 23503654 + 102021196 AGCD01002242;AGCD01002243;AGCD01002244;AGCD01002245;AGCD01002246;GBBH01186974;XM_013512887;XM_013512888;XM_013512891;XM_013512898;XM_013512906 XP_013368341;XP_013368342;XP_013368345;XP_013368352;XP_013368360 MODEL 8724659 protein-coding LOC102009784 small proline-rich protein 2E NW_004955592 315272 316198 + 102009784 AGCD01076302;XM_005414611 XP_005414668 MODEL 8999557 pseudo LOC102013388 calcium-transporting ATPase type 2C member 1 pseudogene NW_004955408 2427135 2428006 + 102013388 AGCD01008006 MODEL 8851519 ncrna LOC102007102 uncharacterized LOC102007102 NW_004955468 7023137 7030091 + 102007102 AGCD01051993;GBDF01224168;XR_263396 MODEL 8981763 ncrna LOC102014127 uncharacterized LOC102014127 NW_004955468 11890174 11900706 - 102014127 AGCD01052139;GBDF01260300;XR_001236905;XR_001236906;XR_263416 MODEL 8777629 protein-coding Clec3b C-type lectin domain family 3 member B ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); kringle domain binding (ortholog); INVOLVED IN bone mineralization (ortholog); ossification (ortholog); positive regulation of plasminogen activation (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); retinal macular dystrophy 4 (ortholog); Scheuermann's disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); granular component (ortholog) NW_004955420 26665472 26669474 - 102010167 AGCD01021426;AGCD01021427;GBCQ01000804;GBDF01161631;XM_013513371 XP_013368825 MODEL 8822371 protein-coding LOC102004210 uncharacterized LOC102004210 NW_004955445 12207949 12220949 + 102004210 AGCD01039744;AGCD01039745;XM_013518243 XP_013373697 MODEL 9012362 protein-coding Dnaaf3 dynein axonemal assembly factor 3 INVOLVED IN axonemal dynein complex assembly (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog) NW_004955567 1030467 1036562 + 102004018 AGCD01074454;AGCD01074455;GBBH01001932;GBDI01070144;XM_005413352 XP_005413409 MODEL 8760078 protein-coding Aurkb aurora kinase B ENCODES a protein that exhibits histone H1-4S27 kinase activity (ortholog); histone H3S28 kinase activity (ortholog); kinase binding (ortholog); INVOLVED IN cell cycle G2/M phase transition (ortholog); cellular response to UV (ortholog); cleavage furrow formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome (ortholog) NW_004955467 8715387 8720889 + 102022269 AGCD01051466;GBDF01045906;XM_005399426;XM_005399427;XM_013522019;XM_013522020;XM_013522021 XP_005399483;XP_005399484;XP_013377473;XP_013377474;XP_013377475 MODEL 8898926 protein-coding Abca13 ATP binding cassette subfamily A member 13 INVOLVED IN ceramide transport (ortholog); positive regulation of cholesterol transport (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); intracellular vesicle (ortholog) NW_004955456 4977504 5341259 - 102006422 AGCD01046315;AGCD01046316;AGCD01046317;AGCD01046318;AGCD01046319;AGCD01046320;AGCD01046321;AGCD01046322;AGCD01046323;AGCD01046324;AGCD01046325;AGCD01046326;AGCD01046327;GBBH01203320;XM_013520510 XP_013375964 MODEL 39131874 rrna 5S_rRNA 5S ribosomal RNA 8856089 pseudo LOC102009017 60S ribosomal protein L14 pseudogene NW_004955408 1564719 1565405 - 102009017 AGCD01007965 MODEL 39134216 misc_rna 7SK 7SK RNA 9021221 protein-coding LOC102011821 putative olfactory receptor 2B8 NW_004955576 1362244 1363185 + 102011821 AGCD01075374;XM_005413954 XP_005414011 MODEL 8909409 trna Trnaq-cug transfer RNA glutamine (anticodon CUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978823 AGCD01042594;AGCD01050595;AGCD01050600;AGCD01050634;AGCD01051475;AGCD01074498 MODEL 8732630 protein-coding Atg3 autophagy related 3 ENCODES a protein that exhibits Atg12 transferase activity (ortholog); Atg8-family conjugating enzyme activity (ortholog); Atg8-family ligase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcoholic cardiomyopathy (ortholog); alcoholic hepatitis (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955427 12881454 12906399 - 102028317 AGCD01027229;AGCD01027230;GBDI01082546;XM_005386390 XP_005386447 MODEL 8962295 protein-coding Antxr2 ANTXR cell adhesion molecule 2 INVOLVED IN collagen fibril organization (ortholog); collagen metabolic process (ortholog); single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosing spondylitis (ortholog); anthrax disease (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); external side of plasma membrane (ortholog) NW_004955433 4212729 4345611 - 102024717 AGCD01031456;AGCD01031457;AGCD01031458;AGCD01031459;AGCD01031460;AGCD01031461;GBCE01137016;GBDJ01080911;XM_005388217 XP_005388274 MODEL 8854492 ncrna LOC102010969 uncharacterized LOC102010969 NW_004955452 5395349 5427078 - 102010969 AGCD01044025;AGCD01044026;AGCD01044027;AGCD01044028;AGCD01044029;AGCD01044030;AGCD01044031;GBCB01057543;XR_001236120;XR_262656 MODEL 8838960 protein-coding Filip1 filamin A interacting protein 1 INVOLVED IN cerebral cortex development (ortholog); corpus callosum development (ortholog); modification of postsynaptic structure (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN actin cytoskeleton (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955502 3806016 3976013 - 102012981 AGCD01064322;AGCD01064323;GBBH01076633;GBCB01038385;XM_013505828;XM_013505829;XM_013505830 XP_013361282;XP_013361283;XP_013361284 MODEL 8803293 protein-coding Adcy3 adenylate cyclase 3 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN acrosome reaction (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Bulimia (ortholog); cardiomyopathy (ortholog); FOUND IN acrosomal vesicle (ortholog); apical cytoplasm (ortholog); ciliary membrane (ortholog) NW_004955469 6933208 7026179 - 102029496 AGCD01052399;AGCD01052400;AGCD01052401;AGCD01052402;AGCD01052403;GBBH01198294;GBDK01116618;XM_013522659 XP_013378113 MODEL 8762028 protein-coding LOC102007488 vomeronasal type-1 receptor 2-like NW_004955603 278326 279225 + 102007488 AGCD01076825;XM_005414837 XP_005414894 MODEL 8709536 ncrna LOC102022469 uncharacterized LOC102022469 NW_004955408 24472374 24475060 - 102022469 AGCD01008610;GBCE01106540;XR_001231905;XR_001231907 MODEL 8978239 protein-coding LOC102004934 uncharacterized LOC102004934 NW_004955419 19866435 19869461 + 102004934 AGCD01020220;GBDF01239719;XM_005382936 XP_005382993 MODEL 9067969 protein-coding Lpin1 lipin 1 ENCODES a protein that exhibits histone deacetylase binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); animal organ regeneration (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute Recurrent Myoglobinuria, Autosomal Recessive (ortholog); Cachexia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955487 6139188 6207316 + 102008002 AGCD01059358;AGCD01059359;AGCD01059360;AGCD01059361;AGCD01059362;GBCB01006082;XM_005404433;XM_005404434;XM_005404435 XP_005404490;XP_005404491;XP_005404492 MODEL 8789881 protein-coding Plpbp pyridoxal phosphate binding protein ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955463 13467965 13498544 + 102012515 AGCD01049867;AGCD01049868;AGCD01049869;GBCQ01038272;XM_005398413;XM_005398414 XP_005398470;XP_005398471 MODEL 8735666 ncrna LOC102006004 uncharacterized LOC102006004 NW_004955461 3891790 3962423 - 102006004 AGCD01048855;AGCD01048856;AGCD01048857;GBDK01220667;XR_263078 MODEL 8817269 pseudo LOC102008251 60S ribosomal protein L17 pseudogene NW_004955523 12998 13552 + 102008251 AGCD01068430 MODEL 8964926 pseudo LOC102014128 tetraspanin-11-like NW_004955413 1127662 1159892 - 102014128 AGCD01013511 MODEL 8832452 protein-coding Il23r interleukin 23 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-12 receptor binding (ortholog); interleukin-23 binding (ortholog); INVOLVED IN interleukin-23-mediated signaling pathway (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of defense response to virus by host (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); arthritis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); interleukin-23 receptor complex (ortholog); plasma membrane (ortholog) NW_004955423 23841342 23885191 - 102016288 AGCD01024020;AGCD01024021;GBBH01099037;XM_005385277 XP_005385334 MODEL 8959910 protein-coding Acot13 acyl-CoA thioesterase 13 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955483 2360758 2375071 - 102010264 AGCD01057675;GBCQ01010402;XM_005403366 XP_005403423 MODEL 39132127 rrna 5S_rRNA 5S ribosomal RNA 8934067 protein-coding Slc38a2 solute carrier family 38 member 2 ENCODES a protein that exhibits acidic amino acid transmembrane transporter activity (ortholog); alanine:sodium symporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); INVOLVED IN alanine transport (ortholog); amino acid import (ortholog); amino acid transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Contusions (ortholog); FOUND IN axon (ortholog); brush border (ortholog); cytoplasm (ortholog) NW_004955500 5517323 5530055 - 102012220 AGCD01063844;GBBH01063737;GBDI01139981;XM_005406598 XP_005406655 MODEL 8875475 protein-coding Wdr5b WD repeat domain 5B FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955427 21698766 21700390 - 102010390 AGCD01027454;GBCE01034152;XM_005386511 XP_005386568 MODEL 9020528 protein-coding LOC102003148 RNA-binding protein FUS NW_004955493 8027419 8038171 + 102003148 AGCD01061257;GBDJ01020436;GBDK01016818;XM_013504880;XM_013504881 XP_013360334;XP_013360335 MODEL 8752967 pseudo LOC102012190 heat shock factor-binding protein 1 pseudogene NW_004955415 16038711 16039206 + 102012190 AGCD01016366;XM_005380832 MODEL 8731398 pseudo LOC102009787 glucose 1,6-bisphosphate synthase pseudogene NW_004955402 47456121 47465974 - 102009787 AGCD01001183;AGCD01001184;AGCD01001185;AGCD01001186;AGCD01001187 MODEL 8890792 ncrna LOC102018379 uncharacterized LOC102018379 NW_004955470 856113 859567 - 102018379 AGCD01052624;GBDF01054789;XR_263455 MODEL 8996849 protein-coding Sgk2 serum/glucocorticoid regulated kinase 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955445 13581145 13625320 - 102026270 AGCD01039794;AGCD01039795;AGCD01039796;AGCD01039797;AGCD01039798;AGCD01039799;GBCQ01033867;XM_005392499;XM_013518253;XR_001235575 XP_005392556;XP_013373707 MODEL 9014010 protein-coding Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cell development (ortholog); cell population proliferation (ortholog); chromosome organization (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); ERCC4-ERCC1 complex (ortholog) NW_004955555 2393510 2430180 - 102012252 AGCD01073149;AGCD01073150;AGCD01073151;AGCD01073152;AGCD01073153;GBCB01023844;XM_005412522;XM_005412523;XM_005412524;XM_013508709;XM_013508710 XP_005412579;XP_005412580;XP_005412581;XP_013364163;XP_013364164 MODEL 8720095 protein-coding Bpgm bisphosphoglycerate mutase ENCODES a protein that exhibits bisphosphoglycerate mutase activity (ortholog); INVOLVED IN cellular response to stress (ortholog); defense response to protozoan (ortholog); erythrocyte development (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH familial erythrocytosis 8 (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955494 7867295 7889440 - 102019610 AGCD01061558;GBBH01208829;XM_005405507;XM_005405508;XM_013505024 XP_005405564;XP_005405565;XP_013360478 MODEL 8938512 protein-coding Cdsn corneodesmosin ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cell-cell adhesion (ortholog); corneocyte desquamation (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); hypotrichosis 2 (ortholog); FOUND IN cornified envelope (ortholog); desmosome (ortholog); extracellular region (ortholog) NW_004955583 959544 968632 - 102024069 AGCD01075875;GBDJ01402797;XM_005414330;XM_005414331 XP_005414387;XP_005414388 MODEL 10218927 protein-coding Rcvrn recoverin ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN phototransduction (ortholog); regulation of calcium ion transport (ortholog); visual perception (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); thymoma (ortholog); FOUND IN dendrite (ortholog); perikaryon (ortholog); photoreceptor inner segment (ortholog) NW_004955467 7220237 7236450 + 106146237 AGCD01051431;GBDK01129198;XM_013522133 XP_013377587 MODEL 39131363 protein-coding C20orf204 chromosome 20 open reading frame 204 8709998 protein-coding Prkrip1 PRKR interacting protein 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN renal system process (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955456 15188211 15216267 - 102016022 AGCD01046663;AGCD01046664;GBDF01085713;XM_005396837 XP_005396894 MODEL 9068074 ncrna LOC102010191 uncharacterized LOC102010191 NW_004955521 1508637 1515821 + 102010191 AGCD01068187;GBDF01220340;XR_264600;XR_264602 MODEL 39131876 rrna 5S_rRNA 5S ribosomal RNA 39134217 misc_rna 7SK 7SK RNA 8724632 protein-coding LOC102008614 cytochrome c oxidase subunit 7A1, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); dilated cardiomyopathy (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog); respiratory chain complex IV (ortholog) NW_004955468 2442819 2445169 + 102008614 AGCD01051817;GBCQ01010676;XM_005399919 XP_005399976 MODEL 9061502 pseudo LOC102010970 dnaJ homolog subfamily B member 6-like NW_004955452 1116250 1116893 - 102010970 AGCD01043831 MODEL 39133950 misc_rna 7SK 7SK RNA 8849068 ncrna LOC102013755 uncharacterized LOC102013755 NW_004955436 2073082 2077775 + 102013755 AGCD01033601;GBDF01220311;XR_001234933;XR_261743;XR_261744;XR_261745 MODEL 8893417 protein-coding Cd93 CD93 molecule ENCODES a protein that exhibits complement component C1q complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); thyroid gland carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955415 30244231 30255184 - 102029615 AGCD01016660;GBCQ01091933;XM_005380960;XR_260326 XP_005381017 MODEL 8828615 protein-coding Slc38a3 solute carrier family 38 member 3 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-asparagine transmembrane transporter activity (ortholog); L-asparagine, sodium:proton antiporter activity (ortholog); INVOLVED IN asparagine transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to potassium ion starvation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 102 (ortholog); Dwarfism (ortholog); Endotoxemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) NW_004955532 2023694 2046556 + 102026468 AGCD01070209;AGCD01070210;AGCD01070211;GBCQ01114446;XM_005410248;XM_005410249 XP_005410305;XP_005410306 MODEL 8853259 protein-coding LOC102004573 protein-glutamine gamma-glutamyltransferase K NW_004955409 36071919 36100923 + 102004573 AGCD01010441;AGCD01010442;AGCD01010443;GBDI01026416;GBDK01309878;XM_005377020 XP_005377077 MODEL 8877987 protein-coding LOC102013390 uncharacterized LOC102013390 NW_004955409 845678 869527 + 102013390 AGCD01009168;GBDI01372716;XM_005376615;XM_005376617;XM_005376619;XM_005376621;XM_013510467;XM_013510468;XM_013510469;XM_013510470;XM_013510471;XM_013510472;XR_001232685;XR_001232686;XR_001232687 XP_005376672;XP_005376674;XP_005376676;XP_005376678;XP_013365921;XP_013365922;XP_013365923;XP_013365924;XP_013365925;XP_013365926 MODEL 8857044 protein-coding Ambp alpha-1-microglobulin/bikunin precursor ENCODES a protein that exhibits antioxidant activity (ortholog); carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to reactive oxygen species (ortholog); cytochrome c metabolic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN extracellular region; cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955419 13478904 13492329 + 102017455 AGCD01020004;GBDK01342688;XM_005382656 XP_005382713 MODEL 8786853 protein-coding Cxcr6 C-X-C motif chemokine receptor 6 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); ASSOCIATED WITH systemic scleroderma (ortholog) NW_004955420 26056464 26061992 - 102003029 AGCD01021389;GBDJ01402626;XM_005383457 XP_005383514 MODEL 9064216 ncrna LOC102004211 uncharacterized LOC102004211 NW_004955574 1056116 1065039 + 102004211 AGCD01075147;AGCD01075148;GBDF01127794;XR_265063 MODEL 8825977 protein-coding Clec4d C-type lectin domain family 4 member D ENCODES a protein that exhibits D-mannose binding (ortholog); immunoglobulin receptor binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 5267548 5276969 - 102016364 AGCD01013660;AGCD01013661;GBDK01281118;XM_005378869 XP_005378926 MODEL 8880724 protein-coding Plpp1 phospholipid phosphatase 1 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); diacylglycerol diphosphate phosphatase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid catabolic process (ortholog); phospholipid dephosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; Fabry disease pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Disease Progression (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); membrane (ortholog) NW_004955446 12201678 12279992 + 102018446 AGCD01040227;AGCD01040228;GBCC01038817;GBDF01046744;XM_013518405 XP_013373859 MODEL 8881119 ncrna LOC102006005 uncharacterized LOC102006005 NW_004955462 6714177 6722753 - 102006005 AGCD01049288;GBDI01311251;XR_263100;XR_263101 MODEL 8922520 protein-coding Rsph4a radial spoke head component 4A INVOLVED IN axoneme assembly (ortholog); cilium movement (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); radial spoke head (ortholog) NW_004955436 30638 43581 - 102006069 AGCD01033530;GBDK01359557;XM_005389115;XM_013516647;XM_013516648;XM_013516649 XP_005389172;XP_013372101;XP_013372102;XP_013372103 MODEL 8860824 protein-coding Slc38a4 solute carrier family 38 member 4 ENCODES a protein that exhibits alanine:sodium symporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); amino acid:sodium symporter activity (ortholog); INVOLVED IN L-alanine import across plasma membrane (ortholog); L-alanine transmembrane transport (ortholog); L-arginine transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN microvillus membrane (ortholog); plasma membrane (ortholog) NW_004955500 5859566 5925084 - 102012776 AGCD01063858;AGCD01063859;AGCD01063860;AGCD01063861;GBCB01056315;XM_005406599;XM_005406600;XM_005406601;XM_013505723 XP_005406656;XP_005406657;XP_005406658;XP_013361177 MODEL 8732173 protein-coding Auts2 activator of transcription and developmental regulator AUTS2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axon extension (ortholog); dendrite extension (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); atrial heart septal defect (ortholog); autism spectrum disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); growth cone (ortholog); nucleoplasm (ortholog) NW_004955456 10294525 11417761 - 102011279 AGCD01046521;AGCD01046522;AGCD01046523;AGCD01046524;AGCD01046525;AGCD01046526;AGCD01046527;AGCD01046528;AGCD01046529;AGCD01046530;AGCD01046531;AGCD01046532;AGCD01046533;AGCD01046534;AGCD01046535;AGCD01046536;AGCD01046537;AGCD01046538;AGCD01046539;AGCD01046540;AGCD01046541;AGCD01046542;AGCD01046543;AGCD01046544;AGCD01046545;AGCD01046546;AGCD01046547;AGCD01046548;AGCD01046549;AGCD01046550;GBCB01021501;GBCQ01039445;XM_013520551;XM_013520552;XM_013520553;XM_013520554;XM_013520555;XM_013520557 XP_013376005;XP_013376006;XP_013376007;XP_013376008;XP_013376009;XP_013376011 MODEL 8931344 protein-coding Abca2 ATP binding cassette subfamily A member 2 ENCODES a protein that exhibits ATP binding (ortholog); ceramide floppase activity (ortholog); endopeptidase regulator activity (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); ceramide translocation (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955513 5035879 5051140 - 102029101 AGCD01066951;GBCB01039194;GBDK01084651;XM_013506707 XP_013362161 MODEL 8848247 protein-coding Ccbe1 collagen and calcium binding EGF domains 1 ENCODES a protein that exhibits collagen binding (ortholog); protease binding (ortholog); INVOLVED IN lung development (ortholog); lymph vessel development (ortholog); lymphangiogenesis (ortholog); ASSOCIATED WITH bronchopulmonary dysplasia (ortholog); cervical cancer (ortholog); Facies (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955402 43551810 43819731 - 102014847 AGCD01001073;AGCD01001074;AGCD01001075;AGCD01001076;AGCD01001077;AGCD01001078;AGCD01001079;AGCD01001080;GBDJ01234822;XM_005373004;XM_013511096 XP_005373061;XP_013366550 MODEL 8832602 protein-coding Il24 interleukin 24 INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); negative regulation of cell migration (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Lung Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955406 42431845 42437392 + 102023328 AGCD01006707;XM_013502798;XM_013502800;XM_013502801 XP_013358252;XP_013358254;XP_013358255 MODEL 39132128 rrna 5S_rRNA 5S ribosomal RNA 9022016 ncrna LOC102011824 uncharacterized LOC102011824 NW_004955402 7083653 7093047 - 102011824 AGCD01000165;GBDF01118415;XR_259035 MODEL 8740972 protein-coding Cfap263 cilia and flagella associated protein 263 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); protein-containing complex (ortholog) NW_004955433 15750921 15775466 + 102011576 AGCD01031764;AGCD01031765;GBDF01190993;XM_005388436;XM_005388437;XM_013516275 XP_005388493;XP_005388494;XP_013371729 MODEL 39134082 misc_rna 7SK 7SK RNA 8983348 protein-coding Antxrl ANTXR like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955510 6297209 6343033 - 102022727 AGCD01066305;GBDF01085762;XM_013506337;XM_013506338;XM_013506339;XM_013506340;XM_013506341 XP_013361791;XP_013361792;XP_013361793;XP_013361794;XP_013361795 MODEL 8931564 protein-coding Atg4a autophagy related 4A cysteine peptidase ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); protein-phosphatidylethanolamide deconjugating activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); proteolysis (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog) NW_004955490 7765145 7825126 - 102014369 AGCD01060263;AGCD01060264;AGCD01060265;GBCB01019840;XM_005404678 XP_005404735 MODEL 8742137 protein-coding LOC102010200 protein S100-A6-like NW_004955545 34876 36059 - 102010200 AGCD01071760;GBDI01224351;XM_005411403 XP_005411460 MODEL 8837445 protein-coding LOC102007489 melanoma antigen preferentially expressed in tumors-like NW_004955608 370665 408600 - 102007489 AGCD01077038;AGCD01077039;AGCD01077040;XM_013510119 XP_013365573 MODEL 8731158 protein-coding LOC102022471 olfactory receptor 6C2 NW_004955458 2877948 2878895 + 102022471 AGCD01047255;XM_005397503 XP_005397560 MODEL 8950652 protein-coding Sorbs3 sorbin and SH3 domain containing 3 ENCODES a protein that exhibits vinculin binding (ortholog); INVOLVED IN cell-substrate adhesion (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); nucleus (ortholog) NW_004955403 45973381 46003807 + 102009004 AGCD01002845;AGCD01002846;AGCD01002847;GBBH01031911;XM_005373666;XM_005373668;XM_005373669;XM_005373670;XM_005373671;XM_005373674;XM_005373675;XM_005373676;XM_013513844;XM_013513847 XP_005373723;XP_005373725;XP_005373726;XP_005373727;XP_005373728;XP_005373731;XP_005373732;XP_005373733;XP_013369298;XP_013369301 MODEL 8957829 pseudo LOC102004938 40S ribosomal protein S14 pseudogene NW_004955421 13418076 13419433 + 102004938 AGCD01021946 MODEL 9056035 protein-coding Adcy4 adenylate cyclase 4 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955409 35966529 35982839 + 102030158 AGCD01010437;AGCD01010438;GBBH01227879;GBCE01034250;XM_005377013 XP_005377070 MODEL 8743504 protein-coding LOC102007103 cytochrome P450 2D17-like NW_004955413 27588186 27597795 - 102007103 AGCD01014517;GBCB01038107;XM_005379404;XM_013511460;XM_013511461 XP_005379461;XP_013366914;XP_013366915 MODEL 8914239 protein-coding Lpin2 lipin 2 ENCODES a protein that exhibits phosphatidate phosphatase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 7457408 7505829 + 102016763 AGCD01000175;GBCQ01033663;XM_005372657;XM_005372661 XP_005372714;XP_005372718 MODEL 8949339 protein-coding LOC102009788 vomeronasal type-1 receptor 4-like NW_004955603 389482 390411 - 102009788 AGCD01076843;XM_005414844 XP_005414901 MODEL 9004443 pseudo LOC102004574 tetratricopeptide repeat protein 37 pseudogene NW_004955409 17034095 17039090 + 102004574 AGCD01009758 MODEL 9025267 protein-coding Ahcyl1 adenosylhomocysteinase like 1 ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); enzyme regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); epithelial fluid transport (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955435 13487441 13525924 + 102013206 AGCD01033203;GBDF01120093;XM_005388904;XM_013516542 XP_005388961;XP_013371996 MODEL 8907705 ncrna LOC102014129 uncharacterized LOC102014129 NW_004955469 10523201 10529646 + 102014129 AGCD01052536;GBDF01279244;XR_263448 MODEL 8995647 protein-coding Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); bone mineralization (ortholog); cell population proliferation (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acquired immunodeficiency syndrome (ortholog); acute leukemia (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cytoplasm (ortholog); MMXD complex (ortholog) NW_004955555 2355005 2369599 - 102009659 AGCD01073148;GBDF01126874;XM_005412511;XM_005412512;XM_013508701 XP_005412568;XP_005412569;XP_013364155 MODEL 9014562 trna Trnaq-uug transfer RNA glutamine (anticodon UUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955465;NW_004955465;NW_004955451 757927;13819250;13329350;12259037 757998;13819321;13329421;12259108 +;+;-;- 101978822 AGCD01043382;AGCD01050600;AGCD01050626;AGCD01057629 MODEL 39131371 protein-coding ACOT6 acyl-CoA thioesterase 6 8795510 protein-coding Arf3 ARF GTPase 3 INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955500 7756936 7761953 - 102010178 AGCD01063945;GBBH01032565;XM_013505647 XP_013361101 MODEL 8723248 ncrna LOC102006006 uncharacterized LOC102006006 NW_004955462 11471552 11476166 - 102006006 AGCD01049391;GBDF01209715;XR_001236585 MODEL 8777378 ncrna LOC102003152 uncharacterized LOC102003152 NW_004955495 7582405 7586650 + 102003152 AGCD01062154;XR_264168 MODEL 8858681 pseudo LOC102012193 proteasome subunit alpha type-6 pseudogene NW_004955416 8425977 8426698 - 102012193 AGCD01017052 MODEL 8760533 protein-coding Dnaaf4 dynein axonemal assembly factor 4 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH dyslexia (ortholog); Kartagener syndrome (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955409 498450 523067 + 102010554 AGCD01009153;AGCD01009154;GBBH01166208;GBDF01157322;XM_013510266;XM_013510267;XM_013510268;XM_013510269;XM_013510270 XP_013365720;XP_013365721;XP_013365722;XP_013365723;XP_013365724 MODEL 8793096 protein-coding LOC102009018 up-regulator of cell proliferation NW_004955456 7974915 7999963 + 102009018 AGCD01046440;AGCD01046441;AGCD01046442;AGCD01046443;GBBH01208050;GBCE01137430;XM_013520521 XP_013375975 MODEL 8770379 protein-coding Sgk3 serum/glucocorticoid regulated kinase family member 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); ASSOCIATED WITH hypotrichosis (ortholog); prostate cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955444 12385747 12501589 - 102013659 AGCD01039071;AGCD01039072;AGCD01039073;AGCD01039074;GBCQ01126883;XM_005392140;XM_005392141;XM_005392143;XM_013518177;XM_013518178 XP_005392197;XP_005392198;XP_005392200;XP_013373631;XP_013373632 MODEL 8876439 protein-coding LOC102008252 cartilage oligomeric matrix protein NW_004955524 2879519 2884305 + 102008252 AGCD01068843;GBDI01053407;GBDK01101224;XM_013507182 XP_013362636 MODEL 8944462 protein-coding LOC102004212 cytochrome P450 2F3 ENCODES a protein that exhibits monooxygenase activity (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN naphthalene catabolic process (ortholog); response to toxic substance (ortholog); trichloroethylene metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Experimental Liver Neoplasms (ortholog); hepatocellular carcinoma (ortholog) NW_004955578 530094 541951 + 102004212 AGCD01075488;GBCQ01007573;XM_005414015 XP_005414072 MODEL 8751625 pseudo LOC102004575 F-box only protein 9 pseudogene NW_004955461 14590359 14591743 + 102004575 AGCD01049056 MODEL 39131877 rrna 5S_rRNA 5S ribosomal RNA 8866111 protein-coding Plpp2 phospholipid phosphatase 2 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid dephosphorylation (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN caveola (ortholog); early endosome (ortholog); early endosome membrane (ortholog) NW_004955495 7307079 7310898 + 102027996 AGCD01062130;GBCB01088570;GBDJ01189155;XM_005406052 XP_005406109 MODEL 8959030 protein-coding Ccdc102a coiled-coil domain containing 102A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog) NW_004955433 15138379 15150041 - 102029548 AGCD01031746;GBBH01114835;GBDF01019045;XM_013516254 XP_013371708 MODEL 8713571 protein-coding Filip1l filamin A interacting protein 1 like INVOLVED IN connective tissue replacement involved in inflammatory response wound healing (ortholog); fatty acid metabolic process (ortholog); gene expression (ortholog); FOUND IN centrosome (ortholog) NW_004955427 1386163 1641985 - 102019187 AGCD01026873;AGCD01026874;AGCD01026875;AGCD01026876;AGCD01026877;AGCD01026878;AGCD01026879;GBDK01232581;XM_005386289;XM_013515090 XP_005386346;XP_013370544 MODEL 8800487 protein-coding Wdr6 WD repeat domain 6 ENCODES a protein that exhibits enzyme regulator activity (ortholog); enzyme-substrate adaptor activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); negative regulation of cell population proliferation (ortholog); wobble position ribose methylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Dwarfism (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955532 1029857 1039020 + 102008347 AGCD01070161;AGCD01070162;GBCB01099321;XM_005410186;XM_013507579 XP_005410243;XP_013363033 MODEL 8741546 ncrna LOC102010975 uncharacterized LOC102010975 NW_004955457 7328755 7340258 + 102010975 AGCD01046876;GBDF01145843;XR_262928 MODEL 8952678 protein-coding LOC102008615 zinc finger protein 792 NW_004955468 4295637 4302563 - 102008615 AGCD01051905;GBCQ01021284;XM_013522370;XM_013522371;XM_013522372;XM_013522373 XP_013377824;XP_013377825;XP_013377826;XP_013377827 MODEL 8870333 ncrna LOC102010203 uncharacterized LOC102010203 NW_004955551 286892 305957 - 102010203 AGCD01072653;AGCD01072654;GBDK01406556;XR_001232275;XR_264923 MODEL 8860648 protein-coding Atg4b autophagy related 4B cysteine peptidase ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955542 164969 192498 - 102005841 AGCD01071461;GBCE01096660;XM_005411119;XM_013508088 XP_005411176;XP_013363542 MODEL 9015823 pseudo LOC102018380 olfactory receptor 51F1-like NW_004955414 20378324 20379265 - 102018380 AGCD01015371 MODEL 8832321 pseudo LOC102013392 ribosomal L1 domain-containing protein 1 pseudogene NW_004955409 26666765 26667942 - 102013392 AGCD01010196 MODEL 8912687 ncrna LOC102007107 uncharacterized LOC102007107 NW_004955414 22942884 22992663 + 102007107 AGCD01015486;GBDF01051420;XR_260189 MODEL 8782965 protein-coding Bphl biphenyl hydrolase like ENCODES a protein that exhibits alpha-amino-acid esterase activity (ortholog); serine hydrolase activity (ortholog); INVOLVED IN homocysteine metabolic process (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955465 10093342 10120588 - 102017109 AGCD01050501;AGCD01050502;GBCQ01001027;XM_005398902;XM_005398903;XM_013521831 XP_005398959;XP_005398960;XP_013377285 MODEL 9027502 protein-coding Sorcs1 sortilin related VPS10 domain containing receptor 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease 6 (ortholog); lung cancer (ortholog); FOUND IN membrane (ortholog) NW_004955485 3719006 4222143 + 102020807 AGCD01058546;AGCD01058547;AGCD01058548;AGCD01058549;AGCD01058550;AGCD01058551;AGCD01058552;AGCD01058553;AGCD01058554;AGCD01058555;AGCD01058556;GBBH01078182;XM_013504127 XP_013359581 MODEL 8769096 protein-coding Cxxc1 CXXC finger protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); unmethylated CpG binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN histone methyltransferase complex (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955402 35335520 35340891 - 102017933 AGCD01000878;GBBH01090896;XM_005372924;XM_005372925;XM_013510694;XM_013510699 XP_005372981;XP_005372982;XP_013366148;XP_013366153 MODEL 8996353 protein-coding Ambra1 autophagy and beclin 1 regulator 1 ENCODES a protein that exhibits GTPase binding (ortholog); protein phosphatase activator activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN inositol metabolic pathway; mitochondrial autophagy pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN axoneme (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955422 1455392 1644368 + 102007023 AGCD01022460;AGCD01022461;AGCD01022462;AGCD01022463;AGCD01022464;AGCD01022465;AGCD01022466;AGCD01022467;GBCQ01139667;XM_005384021;XM_005384022;XM_005384023;XM_005384024;XM_005384025 XP_005384078;XP_005384079;XP_005384080;XP_005384081;XP_005384082 MODEL 39131435 protein-coding C21orf62 chromosome 21 open reading frame 62 9047481 protein-coding Rd3 RD3 regulator of GUCY2D ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN protein transport (ortholog); retina development in camera-type eye (ortholog); visual perception (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Leber congenital amaurosis (ortholog); FOUND IN cone photoreceptor outer segment (ortholog); cytoplasm (ortholog); endosome (ortholog) NW_004955489 896964 903855 + 102013728 AGCD01059820;GBDK01188607;XM_005404502 XP_005404559 MODEL 8764012 protein-coding Aven apoptosis and caspase activation inhibitor INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955416 690440 712391 + 102023028 AGCD01016819;GBCE01054816;XM_005381166 XP_005381223 MODEL 8970067 protein-coding Ahcyl2 adenosylhomocysteinase like 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuron projection (ortholog) NW_004955479 10008814 10211370 + 102008848 AGCD01056515;AGCD01056516;AGCD01056517;AGCD01056518;AGCD01056519;AGCD01056520;AGCD01056521;AGCD01056522;AGCD01056523;AGCD01056524;AGCD01056525;AGCD01056526;AGCD01056527;AGCD01056528;AGCD01056529;GBBH01214807;GBDK01084835;XM_013503272 XP_013358726 MODEL 39132133 rrna 5S_rRNA 5S ribosomal RNA 9022418 protein-coding Abca3 ATP binding cassette subfamily A member 3 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled intramembrane lipid carrier activity (ortholog); INVOLVED IN lung development (ortholog); phosphatidylcholine metabolic process (ortholog); phosphatidylglycerol metabolic process (ortholog); PARTICIPATES IN altered surfactant homeostasis pathway; surfactant homeostasis pathway; transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); carbamoyl phosphate synthetase I deficiency disease (ortholog); cholangiocarcinoma (ortholog); FOUND IN alveolar lamellar body (ortholog); alveolar lamellar body membrane (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955442 14933550 14989492 + 102023749 AGCD01037852;AGCD01037853;GBDK01020576;XM_005391428;XM_005391429 XP_005391485;XP_005391486 MODEL 8754332 protein-coding Il25 interleukin 25 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN eosinophil differentiation (ortholog); inflammatory response (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH allergic asthma (ortholog); allergic rhinitis (ortholog); Amoebic Dysentery due to Entamoeba Histolytica (ortholog); FOUND IN extracellular region (ortholog) NW_004955409 36960902 36964038 - 102020773 AGCD01010484;XM_013510236 XP_013365690 MODEL 39134083 misc_rna 7SK 7SK RNA 8844673 protein-coding LOC102006008 cysteine-rich secretory protein 2 NW_004955411 8242364 8257545 + 102006008 AGCD01011720;GBDF01010088;XM_005377669;XM_005377670;XM_005377671;XM_013510701;XM_013510702 XP_005377726;XP_005377727;XP_005377728;XP_013366155;XP_013366156 MODEL 8752645 protein-coding Cfap276 cilia and flagella associated protein 276 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease intermediate type (ortholog); malaria (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) NW_004955435 12522502 12530699 - 102024043 AGCD01033149;GBBH01007083;XM_005388846 XP_005388903 MODEL 8742840 protein-coding Anxa1 annexin A1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); alpha-beta T cell differentiation (ortholog); arachidonate secretion (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; ASSOCIATED WITH acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); asthma (ortholog); FOUND IN actin filament (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) NW_004955512 5686508 5703645 - 102007684 AGCD01066772;AGCD01066773;GBCE01002344;XM_005408325 XP_005408382 MODEL 9016192 protein-coding Cd96 CD96 molecule INVOLVED IN cell-matrix adhesion (ortholog); negative regulation of natural killer cell cytokine production (ortholog); negative regulation of type II interferon production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); C syndrome (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955427 11971051 12057185 + 102019717 AGCD01027198;AGCD01027199;AGCD01027200;AGCD01027201;GBDI01278939;XM_005386365;XM_005386367;XM_013515037;XR_261254 XP_005386422;XP_005386424;XP_013370491 MODEL 8872034 ncrna LOC102004943 uncharacterized LOC102004943 NW_004955423 3395039 3416041 + 102004943 AGCD01023511;AGCD01023512;GBDF01085995;XR_001234034;XR_001234035;XR_001234036 MODEL 8899671 protein-coding LOC102003153 CD70 antigen-like NW_004955495 2876196 2880324 + 102003153 AGCD01061808;GBDF01041568;XM_013505052 XP_013360506 MODEL 8991322 protein-coding Cdt1 chromatin licensing and DNA replication factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); DNA replication checkpoint signaling (ortholog); mitotic DNA replication initiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN kinetochore (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955541 2683030 2687883 + 102027458 AGCD01071421;AGCD01071422;GBCE01072853;GBDF01221086;XM_013508010 XP_013363464 MODEL 8995680 pseudo LOC102010208 protein kinase C iota type pseudogene NW_004955446 317633 321748 - 102010208 AGCD01039938;XM_005392595 MODEL 8787536 protein-coding Lpin3 lipin 3 ENCODES a protein that exhibits phosphatidate phosphatase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955445 15600510 15616452 - 102029806 AGCD01039848;GBDI01324590;XM_013518277;XM_013518278;XM_013518279;XM_013518280;XM_013518281;XM_013518282 XP_013373731;XP_013373732;XP_013373733;XP_013373734;XP_013373735;XP_013373736 MODEL 8717379 protein-coding Clec4e C-type lectin domain family 4 member E ENCODES a protein that exhibits calcium ion binding (ortholog); glycolipid binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN antifungal innate immune response (ortholog); defense response to bacterium (ortholog); Fc-gamma receptor signaling pathway (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); lung disease (ortholog); melanoma (ortholog); FOUND IN membrane (ortholog); phagocytic vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955413 5256523 5261385 + 102015706 AGCD01013659;GBDF01076579;XM_005378867;XM_005378868;XR_001233008 XP_005378924;XP_005378925 MODEL 39134218 misc_rna 7SK 7SK RNA 8998018 protein-coding LOC102014132 vomeronasal type-1 receptor 90-like NW_004955414 15099427 15100413 - 102014132 AGCD01015176;XM_005380445 XP_005380502 MODEL 8941545 ncrna LOC102008254 uncharacterized LOC102008254 NW_004955436 16825530 16828910 + 102008254 AGCD01033933;GBDF01144258;XR_261796 MODEL 8743582 pseudo LOC102010209 zinc finger CCCH domain-containing protein 15 pseudogene NW_004955446 1347899 1403306 + 102010209 AGCD01039963;AGCD01039964;AGCD01039965 MODEL 8836887 ncrna LOC102013759 uncharacterized LOC102013759 NW_004955437 9463189 9469796 + 102013759 AGCD01034531;AGCD01034532;GBDF01015293;XR_001235074;XR_261869 MODEL 8827214 protein-coding LOC102011826 60S ribosomal protein L17 NW_004955402 34568222 34571290 - 102011826 AGCD01000865;GBDF01002140;XM_013510590 XP_013366044 MODEL 8981151 pseudo LOC102022476 protein sprouty homolog 4-like NW_004955460 12524558 12531163 - 102022476 AGCD01048659 MODEL 8756003 protein-coding Clec4f C-type lectin domain family 4 member F ENCODES a protein that exhibits galactose binding (ortholog); glycolipid binding (ortholog); INVOLVED IN NK T cell activation (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955424 14365348 14379664 + 102003356 AGCD01024652;GBDK01322767;XM_005385608;XM_013514742;XM_013514743;XM_013514744 XP_005385665;XP_013370196;XP_013370197;XP_013370198 MODEL 8960366 pseudo LOC102004578 insulin-like peptide INSL6 NW_004955463 1887844 1902130 + 102004578 AGCD01049528 MODEL 8749713 protein-coding Wdr62 WD repeat domain 62 INVOLVED IN centriole replication (ortholog); cerebral cortex development (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive primary microcephaly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); nucleus (ortholog) NW_004955468 2504181 2545982 - 102011425 AGCD01051824;AGCD01051825;GBDF01003421;XM_013522434;XM_013522435;XM_013522436;XM_013522437 XP_013377888;XP_013377889;XP_013377890;XP_013377891 MODEL 8872103 ncrna LOC102009790 uncharacterized LOC102009790 NW_004955403 20132939 20135472 - 102009790 AGCD01002154;GBDJ01243887;XR_259189 MODEL 9019876 protein-coding LOC102010978 vegetative cell wall protein gp1-like NW_004955410 12702718 12714924 - 102010978 AGCD01010864;GBDJ01264475;XM_005377303;XM_013510591 XP_005377360;XP_013366045 MODEL 8817967 protein-coding LOC102009019 glycosylation-dependent cell adhesion molecule 1-like NW_004955458 1841699 1848240 - 102009019 AGCD01047206;GBCB01051309;XM_005397231 XP_005397288 MODEL 8922919 protein-coding Slc38a5 solute carrier family 38 member 5 ENCODES a protein that exhibits alanine transmembrane transporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN amino acid export across plasma membrane (ortholog); amino acid import across plasma membrane (ortholog); asparagine transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Endotoxemia (ortholog); FOUND IN plasma membrane (ortholog) NW_004955543 15968 24644 - 102017059 AGCD01071554;GBCE01162641;XM_005415372 XP_005415429 MODEL 9017599 protein-coding Dnaaf5 dynein axonemal assembly factor 5 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN cilium movement (ortholog); inner dynein arm assembly (ortholog); outer dynein arm assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dynein axonemal particle (ortholog) NW_004955460 8479274 8525828 + 102009695 AGCD01048517;AGCD01048518;AGCD01048519;AGCD01048520;GBDF01082243;XM_005397777 XP_005397834 MODEL 8888937 ncrna LOC102013393 uncharacterized LOC102013393 NW_004955410 13697777 13709802 - 102013393 AGCD01010893;GBDF01251247;XR_259838 MODEL 9019223 trna Trnar-acg transfer RNA arginine (anticodon ACG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978835 AGCD01010511;AGCD01021398;AGCD01039089;AGCD01050591;AGCD01050597;AGCD01057606;AGCD01057629 MODEL 8915368 protein-coding Atg4c autophagy related 4C cysteine peptidase ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); proteolysis (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955423 26813865 26993308 - 102006590 AGCD01024107;AGCD01024108;AGCD01024109;AGCD01024110;AGCD01024111;AGCD01024112;GBCE01130181;XM_005385332;XM_013514378;XM_013514379;XM_013514380;XM_013514381;XM_013514382;XM_013514384;XR_001234058 XP_005385389;XP_013369832;XP_013369833;XP_013369834;XP_013369835;XP_013369836;XP_013369838 MODEL 8842198 protein-coding Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN apoptotic process (ortholog); DNA repair (ortholog); DNA topological change (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); asphyxia neonatorum (ortholog); FOUND IN nucleoplasm (ortholog); transcription factor TFIID complex (ortholog); transcription factor TFIIH core complex (ortholog) NW_004955459 3210936 3238401 + 102005903 AGCD01048010;AGCD01048011;GBDJ01135141;XM_005397616;XM_005397617;XM_013521085 XP_005397673;XP_005397674;XP_013376539 MODEL 8821238 protein-coding Acot7 acyl-CoA thioesterase 7 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); fatty acid catabolic process (ortholog); long-chain fatty-acyl-CoA catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955486 6188102 6258230 + 102012542 AGCD01059113;AGCD01059114;AGCD01059115;GBDI01078626;XM_005404096;XM_005404097;XM_013504310 XP_005404153;XP_005404154;XP_013359764 MODEL 39133951 misc_rna 7SK 7SK RNA 9048317 protein-coding Sgms1 sphingomyelin synthase 1 ENCODES a protein that exhibits ceramide cholinephosphotransferase activity (ortholog); ceramide phosphoethanolamine synthase activity (ortholog); phosphatidylcholine phospholipase C activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi membrane (ortholog); Golgi trans cisterna (ortholog); Golgi trans cisterna membrane (ortholog) NW_004955425 5507905 5819357 + 102030096 AGCD01025350;AGCD01025351;AGCD01025352;AGCD01025353;AGCD01025354;AGCD01025355;AGCD01025356;AGCD01025357;GBDI01187376;XM_005385896;XM_005385897;XM_013514835;XM_013514836;XM_013514837;XM_013514838;XM_013514839 XP_005385953;XP_005385954;XP_013370289;XP_013370290;XP_013370291;XP_013370292;XP_013370293 MODEL 8982303 pseudo LOC102007492 serine/threonine-protein kinase pim-2 pseudogene NW_004955769 5 841 - 102007492 AGCD01078313;XM_005415103 MODEL 9027019 protein-coding Lpl lipoprotein lipase ENCODES a protein that exhibits apolipoprotein binding (ortholog); calcium ion binding (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to nutrient (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Abdominal Pain (ortholog); alcohol-associated liver disease (ortholog); FOUND IN catalytic complex (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955403 43646084 43672116 + 102023218 AGCD01002783;GBDI01018698;XM_005373625 XP_005373682 MODEL 39131878 rrna 5S_rRNA 5S ribosomal RNA 39132134 rrna 5S_rRNA 5S ribosomal RNA 8832570 protein-coding Plpp3 phospholipid phosphatase 3 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); delta-catenin binding (ortholog); integrin binding (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); blood vessel development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); clear cell renal cell carcinoma (ortholog); coronary artery disease (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955464 3122420 3197359 + 102021743 AGCD01049971;AGCD01049972;GBDJ01134336;XM_013521597;XM_013521598 XP_013377051;XP_013377052 MODEL 8835907 protein-coding Il26 interleukin 26 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); positive regulation of cytokine production (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog) NW_004955458 14701471 14718980 - 102028721 AGCD01047844;AGCD01047845;GBBH01023513;XM_005397467 XP_005397524 MODEL 8794461 protein-coding Fimp1 fertilization-influencing membrane protein 1 INVOLVED IN fertilization (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog) NW_004955493 6940226 6941290 - 102025918 AGCD01061149;GBDF01193215;XM_005405200 XP_005405257 MODEL 8832785 protein-coding Ccdc102b coiled-coil domain containing 102B ENCODES a protein that exhibits protein serine/threonine kinase binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN centriole (ortholog) NW_004955402 52377366 52495386 + 102030585 AGCD01001325;AGCD01001326;AGCD01001327;AGCD01001328;AGCD01001329;AGCD01001330;GBDJ01213459;XM_005373045;XM_005373046;XM_005373047;XM_005373048;XM_005373049;XM_013511295 XP_005373102;XP_005373103;XP_005373104;XP_005373105;XP_005373106;XP_013366749 MODEL 9010934 protein-coding LOC102008619 E3 ISG15--protein ligase HERC5-like NW_004955474 12020037 12065002 - 102008619 AGCD01054645;AGCD01054646;GBBH01011708;GBCE01069694;XM_013502751 XP_013358205 MODEL 8999499 ncrna LOC102011827 uncharacterized LOC102011827 NW_004955592 446843 448929 - 102011827 AGCD01076315;GBCC01022945;XR_265138 MODEL 8754244 protein-coding Cfap298 cilia and flagella associated protein 298 INVOLVED IN cilium assembly (ortholog); regulation of cilium movement (ortholog); ASSOCIATED WITH primary ciliary dyskinesia 26 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955407 32076670 32089307 - 102016780 AGCD01007669;GBDF01010732;XM_005375670;XM_013504205 XP_005375727;XP_013359659 MODEL 8714527 ncrna LOC102007111 uncharacterized LOC102007111 NW_004955415 1538810 1543595 + 102007111 AGCD01015868;GBDF01258856;XR_260258 MODEL 9055848 protein-coding Rsph6a radial spoke head 6 homolog A INVOLVED IN manchette disassembly (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN axoneme (ortholog); radial spoke (ortholog); radial spoke head (ortholog) NW_004955574 247728 264238 - 102022342 AGCD01075095;AGCD01075096;AGCD01075097;GBDJ01355094;XM_005413817 XP_005413874 MODEL 8956392 ncrna LOC102004949 uncharacterized LOC102004949 NW_004955424 14423944 14430745 - 102004949 AGCD01024654;GBDF01279057;XR_261065 MODEL 9037775 gene LOC102018382 Ig heavy chain V-I region 5-like NW_004955470 467752 468318 - 102018382 AGCD01052614;XM_005400820 MODEL 8739454 protein-coding Cxxc4 CXXC finger protein 4 ENCODES a protein that exhibits methyl-CpG binding (ortholog); PDZ domain binding (ortholog); zinc ion binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); Wnt signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); nucleus (ortholog) NW_004955496 4523027 4546671 + 102011334 AGCD01062325;AGCD01062326;GBDF01114472;XM_013505373 XP_013360827 MODEL 8941618 protein-coding Bpi bactericidal permeability increasing protein ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); immune response (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Crohn's disease (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); extracellular region (ortholog) NW_004955445 18393854 18433948 - 102012913 AGCD01039904;GBCQ01100945;XM_005392537;XM_013518374;XM_013518375;XM_013518376 XP_005392594;XP_013373828;XP_013373829;XP_013373830 MODEL 8737740 protein-coding Amd1 adenosylmethionine decarboxylase 1 ENCODES a protein that exhibits adenosylmethionine decarboxylase activity (ortholog); identical protein binding (ortholog); putrescine binding (ortholog); INVOLVED IN polyamine metabolic process (ortholog); S-adenosylmethionine metabolic process (ortholog); spermidine biosynthetic process (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955411 35541517 35563209 + 102025334 AGCD01012439;AGCD01012440;GBDI01060072;XM_005377893 XP_005377950 MODEL 8925102 protein-coding Rd3l RD3 like NW_004955538 2678458 2680078 - 102020161 AGCD01071136;GBDF01108545;XM_005410817 XP_005410874 MODEL 8936517 protein-coding C2cd2 C2 calcium dependent domain containing 2 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955407 39627435 39665156 + 102021097 AGCD01007832;GBBH01214687;GBDJ01064517;XM_013505230 XP_013360684 MODEL 8962710 pseudo LOC102012194 single-stranded DNA-binding protein 2 pseudogene NW_004955477 6506741 6507624 - 102012194 AGCD01055610 MODEL 8759357 protein-coding Cfap299 cilia and flagella associated protein 299 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955433 4581581 5158019 + 102025938 AGCD01031471;AGCD01031472;AGCD01031473;AGCD01031474;AGCD01031475;AGCD01031476;AGCD01031477;AGCD01031478;AGCD01031479;AGCD01031480;AGCD01031481;AGCD01031482;AGCD01031483;AGCD01031484;AGCD01031485;AGCD01031486;AGCD01031487;AGCD01031488;AGCD01031489;AGCD01031490;AGCD01031491;GBDK01431856;XM_005388219;XM_005388220;XM_013516244;XM_013516245;XR_001234746 XP_005388276;XP_005388277;XP_013371698;XP_013371699 MODEL 9029763 protein-coding Avil advillin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); Arp2/3 complex binding (ortholog); INVOLVED IN actin filament organization (ortholog); cilium assembly (ortholog); nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin filament (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) NW_004955458 5499392 5523463 - 102003626 AGCD01047495;AGCD01047496;AGCD01047497;GBBH01022613;GBDJ01116167;XM_013520970;XM_013520971 XP_013376424;XP_013376425 MODEL 8852225 protein-coding Abca4 ATP binding cassette subfamily A member 4 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); all-trans retinal binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN phospholipid transfer to membrane (ortholog); phospholipid translocation (ortholog); photoreceptor cell maintenance (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Abdominal Pain (ortholog); age related macular degeneration (ortholog); age related macular degeneration 14 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955423 612098 738702 + 102010915 AGCD01023416;AGCD01023417;GBDJ01166590;XM_005385003 XP_005385060 MODEL 8773820 protein-coding Adcy6 adenylate cyclase 6 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; glucagon signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); microvillus membrane (ortholog) NW_004955500 7635946 7655579 - 102003260 AGCD01063937;AGCD01063938;GBCQ01036618;XM_005406653;XM_005406656;XM_005406657;XM_005406658;XM_005406659 XP_005406710;XP_005406713;XP_005406714;XP_005406715;XP_005406716 MODEL 8777430 protein-coding Ahdc1 AT-hook DNA binding motif containing 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); promoter-enhancer loop anchoring activity (ortholog); INVOLVED IN adipose tissue development (ortholog); aerobic respiration (ortholog); energy reserve metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autism spectrum disorder (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 6767250 6832989 - 102005102 AGCD01044125;AGCD01044126;AGCD01044127;GBDK01394363;XM_005394910;XM_005394912;XM_005394914;XM_005394915;XM_005394916;XM_005394917;XM_013519581 XP_005394967;XP_005394969;XP_005394971;XP_005394972;XP_005394973;XP_005394974;XP_013375035 MODEL 9008798 protein-coding Prkx protein kinase cAMP-dependent X-linked catalytic subunit ENCODES a protein that exhibits cAMP-dependent protein kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cell-substrate adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955499 2167252 2227510 - 102013848 AGCD01063419;AGCD01063420;AGCD01063421;AGCD01063422;AGCD01063423;AGCD01063424;AGCD01063425;AGCD01063426;AGCD01063427;AGCD01063428;GBBH01002093;GBCQ01174628;XM_013505599 XP_013361053 MODEL 8737240 protein-coding Anxa10 annexin A10 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 37780428 37821212 - 102011723 AGCD01002575;GBDK01223538;XM_013513460 XP_013368914 MODEL 8770310 protein-coding Cd99 CD99 molecule (Xg blood group) INVOLVED IN homotypic cell-cell adhesion (ortholog); myeloid dendritic cell activation (ortholog); positive regulation of neutrophil extravasation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog) NW_004955499 1607382 1646172 + 102010384 AGCD01063372;AGCD01063373;AGCD01063374;AGCD01063375;AGCD01063376;AGCD01063377;GBCB01022919;GBCB01022926;XM_013505598 XP_013361052 MODEL 9052437 protein-coding Cdv3 CDV3 homolog ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955501 4984239 4999414 - 102029534 AGCD01064148;GBDJ01022875;GBDK01076798;XM_005406818 XP_005406875 MODEL 9035373 protein-coding Arf4 ARF GTPase 4 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); GTP binding (ortholog); NAD+-protein-arginine ADP-ribosyltransferase activity (ortholog); INVOLVED IN apical protein localization (ortholog); cell migration (ortholog); dendritic spine development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955430 7288386 7319449 - 102015431 AGCD01029342;AGCD01029343;AGCD01029344;AGCD01029345;AGCD01029346;AGCD01029347;AGCD01029348;GBBH01001002;GBCB01022960;XM_013515600 XP_013371054 MODEL 8986430 protein-coding Wdr64 WD repeat domain 64 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955406 10317674 10439077 - 102017950 AGCD01005855;AGCD01005856;AGCD01005857;AGCD01005858;AGCD01005859;AGCD01005860;AGCD01005861;GBDF01159246;GBDF01159247;XM_013520508 XP_013375962 MODEL 39134223 misc_rna 7SK 7SK RNA 8838809 trna Trnar-ccg transfer RNA arginine (anticodon CCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004957365;NW_004955442;NW_004955465 7;14214277;13880906 79;14214349;13880978 +;-;+ 101978836 AGCD01037806;AGCD01050633;AGCD01080761 MODEL 8894735 pseudo LOC102014133 lysocardiolipin acyltransferase 1 pseudogene NW_004955472 3041379 3042600 - 102014133 AGCD01053499 MODEL 8826709 protein-coding Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); Arsenic Poisoning (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); ERCC4-ERCC1 complex (ortholog) NW_004955442 4833453 4861201 - 102018773 AGCD01037543;AGCD01037544;AGCD01037545;GBDI01017324;XM_005391144;XM_013517964 XP_005391201;XP_013373418 MODEL 8935190 pseudo LOC102007494 glycoprotein endo-alpha-1,2-mannosidase pseudogene NW_004955403 21715243 21717598 - 102007494 AGCD01002203;XM_005373891 MODEL 8898684 protein-coding C2cd2l C2CD2 like ENCODES a protein that exhibits insulin binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasmic side of apical plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955412 20214915 20232260 + 102026620 AGCD01012997;AGCD01012998;AGCD01012999;GBBH01060462;GBDF01279346;XM_005378305;XM_013511211 XP_005378362;XP_013366665 MODEL 8837936 protein-coding Sgms2 sphingomyelin synthase 2 ENCODES a protein that exhibits ceramide cholinephosphotransferase activity (ortholog); ceramide phosphoethanolamine synthase activity (ortholog); phosphatidylcholine phospholipase C activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide phosphoethanolamine biosynthetic process (ortholog); regulation of bone mineralization (ortholog); ASSOCIATED WITH calvarial doughnut lesions with bone fragility (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955496 1909347 1955004 - 102004618 AGCD01062261;GBCE01007641;XM_005406206;XM_005406207;XM_005406208;XM_005406209;XM_005406210;XM_005406211;XM_005406212;XM_013505416;XM_013505417 XP_005406263;XP_005406264;XP_005406265;XP_005406266;XP_005406267;XP_005406268;XP_005406269;XP_013360870;XP_013360871 MODEL 8881799 ncrna LOC102004579 uncharacterized LOC102004579 NW_004955411 7502512 7517533 - 102004579 AGCD01011707;GBDF01254531;XR_001232795;XR_259925 MODEL 8762449 protein-coding Clec4g C-type lectin domain family 4 member G ENCODES a protein that exhibits carbohydrate derivative binding (ortholog); D-mannose binding (ortholog); fructose binding (ortholog); INVOLVED IN negative regulation of T cell mediated immunity (ortholog); negative regulation of T cell proliferation (ortholog); positive regulation of viral life cycle (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955563 1571374 1574901 + 102025298 AGCD01074152;GBDI01110635;XM_005413161 XP_005413218 MODEL 8723520 protein-coding Plpp4 phospholipid phosphatase 4 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); identical protein binding (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); phospholipid dephosphorylation (ortholog); regulation of calcium ion import (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog) NW_004955551 1328652 1458714 + 102015056 AGCD01072692;AGCD01072693;AGCD01072694;GBDJ01262036;XM_005412174 XP_005412231 MODEL 8888702 pseudo LOC102004215 RAC-gamma serine/threonine-protein kinase pseudogene NW_004955582 211110 212482 - 102004215 AGCD01075749 MODEL 8801141 protein-coding Sorcs2 sortilin related VPS10 domain containing receptor 2 INVOLVED IN intracellular protein transport (ortholog); long-term synaptic depression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); early endosome membrane (ortholog); perikaryon (ortholog) NW_004955514 3053127 3390125 - 102008341 AGCD01067092;AGCD01067093;AGCD01067094;GBBH01141459;GBDJ01136170;XM_005408856 XP_005408913 MODEL 8884717 protein-coding Fip1l1 factor interacting with PAPOLA and CPSF1 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955447 17265269 17334197 - 102011709 AGCD01041116;AGCD01041117;AGCD01041118;GBDI01017847;XM_005392905;XM_005392906;XM_005392907;XM_005392908;XM_005392909;XM_005392910;XM_005392911;XM_005392912;XM_005392913 XP_005392962;XP_005392963;XP_005392964;XP_005392965;XP_005392966;XP_005392967;XP_005392968;XP_005392969;XP_005392970 MODEL 8891467 pseudo LOC102011828 transcription initiation factor TFIID subunit 13 pseudogene NW_004955402 57682424 57682792 + 102011828 AGCD01001507 MODEL 8936752 protein-coding Dnaaf6 dynein axonemal assembly factor 6 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH genetic disease (ortholog); nonpapillary renal cell carcinoma (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955490 8760382 8842392 - 102028643 AGCD01060294;AGCD01060295;AGCD01060296;AGCD01060297;GBDI01026953;XM_005404714 XP_005404771 MODEL 8758239 protein-coding Slc38a6 solute carrier family 38 member 6 ENCODES a protein that exhibits L-glutamate transmembrane transporter activity (ortholog); L-glutamine transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955466 8626193 8679764 - 102014433 AGCD01050995;AGCD01050996;AGCD01050997;GBDI01324016;XM_005399168;XM_005399169;XM_013521932;XM_013521933 XP_005399225;XP_005399226;XP_013377386;XP_013377387 MODEL 9023530 protein-coding LOC102010984 sentrin-specific protease 3 NW_004955467 9351956 9374126 - 102010984 AGCD01051498;GBDJ01134691;XM_005399477;XM_005399478;XM_005399483;XM_013522078;XM_013522079;XM_013522080;XM_013522081;XM_013522082 XP_005399534;XP_005399535;XP_005399540;XP_013377532;XP_013377533;XP_013377534;XP_013377535;XP_013377536 MODEL 39134084 misc_rna 7SK 7SK RNA 8781423 protein-coding Cxxc5 CXXC finger protein 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of generation of precursor metabolites and energy (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955418 932198 965894 - 102013719 AGCD01018694;AGCD01018695;GBDK01075972;XM_005382053;XM_005382054;XM_005382055;XM_005382056;XM_005382057;XM_013512966 XP_005382110;XP_005382111;XP_005382112;XP_005382113;XP_005382114;XP_013368420 MODEL 8942198 protein-coding LOC102008255 steroid 21-hydroxylase ENCODES a protein that exhibits 17-hydroxyprogesterone 21-hydroxylase activity (ortholog); heme binding (ortholog); progesterone 21-hydroxylase activity (ortholog); INVOLVED IN C21-steroid hormone biosynthetic process (ortholog); cellular response to peptide hormone stimulus (ortholog); cortisol biosynthetic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955437 513052 516792 + 102008255 AGCD01034140;GBCE01017755;XM_005389407 XP_005389464 MODEL 39131562 protein-coding BPIFA1 BPI fold containing family A member 1 39133952 misc_rna 7SK 7SK RNA 8966323 protein-coding Acot8 acyl-CoA thioesterase 8 ENCODES a protein that exhibits acetoacetyl-CoA hydrolase activity (ortholog); acetyl-CoA hydrolase activity (ortholog); choloyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); dicarboxylic acid catabolic process (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955445 11434649 11454806 + 102027914 AGCD01039693;AGCD01039694;AGCD01039695;GBDF01050826;XM_005392408 XP_005392465 MODEL 8879498 protein-coding LOC102010210 transmembrane protease serine 11A NW_004955447 4915932 4966492 + 102010210 AGCD01040736;GBDI01055640;XM_005392828 XP_005392885 MODEL 9056536 ncrna LOC102013762 uncharacterized LOC102013762 NW_004955442 14446257 14463056 + 102013762 AGCD01037821;GBDF01157306;XR_001235427;XR_001235428;XR_001235429;XR_001235430;XR_262142;XR_262143;XR_262144;XR_262145 MODEL 9061860 protein-coding Rdh10 retinol dehydrogenase 10 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bud elongation involved in lung branching (ortholog); ear development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Experimental Liver Cirrhosis (ortholog); Fetal Death (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); membrane (ortholog) NW_004955444 6878722 6909421 - 102024388 AGCD01038876;GBDI01121275;GBDJ01318433;XM_005392094 XP_005392151 MODEL 8909981 protein-coding LOC102022478 ATP synthase F(0) complex subunit C1, mitochondrial-like NW_004955464 4261213 4261795 - 102022478 AGCD01049986;XM_013521673 XP_013377127 MODEL 8766112 pseudo LOC102003158 zinc transporter ZIP6 pseudogene NW_004955426 25050512 25052806 + 102003158 AGCD01026701 MODEL 8885187 protein-coding Lpo lactoperoxidase ENCODES a protein that exhibits peroxidase activity (ortholog); thiocyanate peroxidase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955451 4754572 4769380 - 102028602 AGCD01043140;AGCD01043141;GBBH01077688;GBDI01358196;XM_005394031 XP_005394088 MODEL 39132138 rrna 5S_rRNA 5S ribosomal RNA 8925570 protein-coding Ccdc106 coiled-coil domain containing 106 ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955567 699551 703745 - 102012910 AGCD01074425;GBDK01359467;XM_005413289 XP_005413346 MODEL 8766963 ncrna LOC102013766 uncharacterized LOC102013766 NW_004955443 14635436 14675174 - 102013766 AGCD01038520;GBDF01307300;XR_262206 MODEL 8964187 protein-coding Il27 interleukin 27 ENCODES a protein that exhibits interleukin-27 receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of defense response to virus by host (ortholog); positive regulation of type II interferon production (ortholog); regulation of T cell proliferation (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Arenaviridae infectious disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955493 6712005 6717417 - 102016819 AGCD01061131;GBDK01404205;XM_005405170 XP_005405227 MODEL 8981152 protein-coding Abca5 ATP binding cassette subfamily A member 5 INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN late endosome (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955478 3526376 3586811 + 102023149 AGCD01055825;AGCD01055826;AGCD01055827;GBCE01049814;GBCE01049815;XM_013503232 XP_013358686 MODEL 9020649 ncrna LOC102007113 uncharacterized LOC102007113 NW_004955415 15209941 15253124 + 102007113 AGCD01016333;AGCD01016334;AGCD01016335;GBDK01120163;XR_001233186 MODEL 8986726 ncrna LOC102004950 uncharacterized LOC102004950 NW_004955425 26645515 26663869 - 102004950 AGCD01025951;GBDF01303336;XR_261175;XR_261176 MODEL 8749243 pseudo LOC102018383 E3 ubiquitin-protein ligase RNF13 pseudogene NW_004955472 5453123 5454314 + 102018383 AGCD01053579 MODEL 8995011 protein-coding Adcy7 adenylate cyclase 7 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); diadenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955433 8362957 8428773 + 102015882 AGCD01031591;AGCD01031592;AGCD01031593;GBDK01005020;XM_005388269;XM_013516211;XM_013516212;XM_013516213;XM_013516214;XM_013516215;XM_013516216 XP_005388326;XP_013371665;XP_013371666;XP_013371667;XP_013371668;XP_013371669;XP_013371670 MODEL 8789554 protein-coding Amdhd1 amidohydrolase domain containing 1 PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955405 32281726 32308230 + 102028714 AGCD01005331;AGCD01005332;AGCD01005333;GBDF01200165;XM_005374693 XP_005374750 MODEL 8968855 ncrna LOC102012196 uncharacterized LOC102012196 NW_004955417 7422583 7435827 - 102012196 AGCD01018004;GBDF01079001;XR_260462 MODEL 39134085 misc_rna 7SK 7SK RNA 39131879 rrna 5S_rRNA 5S ribosomal RNA 8965225 protein-coding LOC102009024 pentatricopeptide repeat-containing protein 1, mitochondrial NW_004955460 15091557 15111456 - 102009024 AGCD01048768;GBDI01065355;XM_005397942;XM_005397943 XP_005397999;XP_005398000 MODEL 8956492 pseudo LOC102008621 josephin-1 pseudogene NW_004955477 274210 274810 + 102008621 AGCD01055485 MODEL 8785048 protein-coding Cfap300 cilia and flagella associated protein 300 ASSOCIATED WITH dextro-looped transposition of the great arteries (ortholog); genetic disease (ortholog); high grade glioma (ortholog) NW_004955412 5368983 5399406 + 102010563 AGCD01012632;GBDF01120319;XM_005377970 XP_005378027 MODEL 8872779 protein-coding Avl9 AVL9 cell migration associated INVOLVED IN cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN recycling endosome (ortholog) NW_004955617 61225 129222 + 102007841 AGCD01077269;AGCD01077270;GBCE01039356;XM_013510145;XR_001232583;XR_001232584;XR_001232585;XR_001232586;XR_001232587;XR_001232588 XP_013365599 MODEL 8765013 protein-coding Cybb cytochrome b-245 beta chain ENCODES a protein that exhibits electron transfer activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Binge Drinking (ortholog); brain infarction (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); NADPH oxidase complex (ortholog) NW_004955587 781533 818149 + 102012042 AGCD01076070;GBDI01225603;XM_005414451 XP_005414508 MODEL 8913441 protein-coding Prl prolactin INVOLVED IN cellular response to ethanol (ortholog); cellular response to hormone stimulus (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); alcohol dependence (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) NW_004955483 4495257 4503377 + 102014360 AGCD01057742;GBCE01142445;XM_005403379 XP_005403436 MODEL 9065783 protein-coding Ercc5 ERCC excision repair 5, endonuclease ENCODES a protein that exhibits bubble DNA binding (ortholog); damaged DNA binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN base-excision repair, AP site formation (ortholog); determination of adult lifespan (ortholog); DNA repair (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cerebrooculofacioskeletal syndrome 3 (ortholog); Cockayne syndrome (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromosome (ortholog); DNA replication factor A complex (ortholog); nucleoplasm (ortholog) NW_004955404 8294506 8321505 - 102028608 AGCD01003350;GBDK01132700;XM_005374021 XP_005374078 MODEL 9020772 pseudo LOC102013402 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955413 383694 386168 - 102013402 AGCD01013462 MODEL 8908293 protein-coding Sgo1 shugoshin 1 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); centriole-centriole cohesion (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955430 12200601 12216845 - 102006155 AGCD01029489;AGCD01029490;GBDF01279460;XM_005387467;XM_005387468;XM_013515668;XM_013515669 XP_005387524;XP_005387525;XP_013371122;XP_013371123 MODEL 9003547 protein-coding Atg4d autophagy related 4D cysteine peptidase ENCODES a protein that exhibits cysteine-type exopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); mitophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955495 1739982 1746362 + 102027874 AGCD01061722;GBCE01064714;GBDF01083821;XM_013505135;XM_013505136;XM_013505137;XM_013505138;XM_013505139;XM_013505140;XM_013505141 XP_013360589;XP_013360590;XP_013360591;XP_013360592;XP_013360593;XP_013360594;XP_013360595 MODEL 8896831 protein-coding Ahi1 Abelson helper integration site 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell junction assembly (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); centriole (ortholog) NW_004955439 1277185 1460296 + 102027679 AGCD01035610;AGCD01035611;AGCD01035612;AGCD01035613;AGCD01035614;GBDF01123056;XM_005390486;XM_013517380 XP_005390543;XP_013372834 MODEL 39134224 misc_rna 7SK 7SK RNA 8736592 protein-coding Arf5 ARF GTPase 5 INVOLVED IN lysosomal membrane organization (ortholog); positive regulation of TOR signaling (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH esophageal cancer (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); lysosomal membrane (ortholog) NW_004955479 8644658 8647697 + 102022285 AGCD01056451;GBDJ01003261;XM_005402360 XP_005402417 MODEL 8985295 protein-coding Wdr7 WD repeat domain 7 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN synaptic vesicle (ortholog) NW_004955402 41071895 41437717 + 102004341 AGCD01001008;AGCD01001009;AGCD01001010;AGCD01001011;AGCD01001012;AGCD01001013;AGCD01001014;AGCD01001015;GBDF01080343;XM_013510978;XM_013510979 XP_013366432;XP_013366433 MODEL 9033586 trna Trnar-ccu transfer RNA arginine (anticodon CCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955553;NW_004955553;NW_004955442;NW_004955442;NW_004955494 1884364;1885977;14211807;14190493;3729252 1884436;1886049;14211879;14190565;3729324 +;+;-;-;- 101978840 AGCD01037805;AGCD01037806;AGCD01061481;AGCD01072903 MODEL 39133953 misc_rna 7SK 7SK RNA 8785353 protein-coding Acot9 acyl-CoA thioesterase 9 ENCODES a protein that exhibits acetyl-CoA hydrolase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); long-chain fatty acid metabolic process (ortholog); short-chain fatty acid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955509 4143246 4167129 - 102023177 AGCD01066054;GBDJ01352477;XM_013506293 XP_013361747 MODEL 8742067 ncrna LOC102007499 uncharacterized LOC102007499 NW_004955404 47564519 47595536 - 102007499 AGCD01004483;GBDF01290414;XR_001235118;XR_259342 MODEL 9059192 protein-coding LOC102006012 C-type lectin domain family 10 member A NW_004955467 9788155 9791911 + 102006012 AGCD01051525;GBDK01397253;XM_005399570 XP_005399627 MODEL 8911307 protein-coding Clec5a C-type lectin domain containing 5A ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN innate immune response (ortholog); myeloid cell differentiation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); dengue hemorrhagic fever (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955494 1683926 1694914 + 102012549 AGCD01061419;GBBH01222149;XM_005405398;XM_005405399;XM_013505006;XM_013505007;XM_013505008 XP_005405455;XP_005405456;XP_013360460;XP_013360461;XP_013360462 MODEL 8775855 protein-coding Anxa11 annexin A11 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cytokinetic process (ortholog); phagocytosis (ortholog); response to calcium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 23 (ortholog); FOUND IN azurophil granule (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 13119782 13161196 - 102016744 AGCD01034647;GBCC01008901;GBDI01004969;XM_005389885 XP_005389942 MODEL 8817383 protein-coding Rsph9 radial spoke head component 9 INVOLVED IN axonemal central apparatus assembly (ortholog); axoneme assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); motile cilium (ortholog) NW_004955437 9437281 9448514 + 102013447 AGCD01034531;GBDF01000568;XM_005389787;XM_013516944 XP_005389844;XP_013372398 MODEL 8759570 ncrna LOC102004217 uncharacterized LOC102004217 NW_004955449 14240223 14246011 - 102004217 AGCD01042162;AGCD01042163;XR_262502 MODEL 9025440 protein-coding Plpp5 phospholipid phosphatase 5 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN phospholipid dephosphorylation (ortholog); FOUND IN plasma membrane (ortholog) NW_004955463 13859492 13864104 - 102023340 AGCD01049892;GBDJ01276219;XM_005398444;XM_005398446 XP_005398501;XP_005398503 MODEL 8995791 protein-coding LOC102013405 cytochrome P450 2D17-like NW_004955413 27621018 27639195 - 102013405 AGCD01014521;AGCD01014522;AGCD01014523;AGCD01014524;AGCD01014525;AGCD01014526;GBBH01145942;XM_013511462 XP_013366916 MODEL 8770414 protein-coding LOC102013768 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial ENCODES a protein that exhibits 1-alpha,25-dihydroxyvitamin D3 23-hydroxylase activity (ortholog); 1-alpha,25-dihydroxyvitamin D3 24-hydroxylase activity (ortholog); 25-hydroxycholecalciferol-23-hydroxylase activity (ortholog); INVOLVED IN cellular response to vitamin D (ortholog); osteoblast differentiation (ortholog); response to vitamin D (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); breast carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955445 4874583 4891723 + 102013768 AGCD01039433;GBCQ01006441;XM_005392282 XP_005392339 MODEL 8810394 ncrna LOC102007114 uncharacterized LOC102007114 NW_004955476 1399542 1400885 - 102007114 AGCD01055205;GBDF01224897;XR_001230779 MODEL 8838413 protein-coding Cdx1 caudal type homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); methyl-CpG binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone morphogenesis (ortholog); pattern specification process (ortholog); ASSOCIATED WITH lung cancer (ortholog) NW_004955415 4337903 4355782 - 102018384 AGCD01015969;GBDI01192037;XM_005380585 XP_005380642 MODEL 9030359 protein-coding Dnaaf8 dynein axonemal assembly factor 8 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dynein axonemal particle (ortholog) NW_004955442 12738888 12752306 - 102006397 AGCD01037745;GBCE01023718;XM_005391277 XP_005391334 MODEL 8703468 protein-coding Ercc6 ERCC excision repair 6, chromatin remodeling factor ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); age related macular degeneration 5 (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN B-WICH complex (ortholog); chromosome (ortholog); nuclear body (ortholog) NW_004955556 745175 812215 + 102029672 AGCD01073179;GBCE01126926;XM_005412569 XP_005412626 MODEL 8781509 protein-coding Slc38a7 solute carrier family 38 member 7 ENCODES a protein that exhibits L-asparagine:sodium symporter activity (ortholog); L-glutamine:sodium symporter activity (ortholog); INVOLVED IN asparagine transport (ortholog); L-glutamine transport (ortholog); sodium ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); lysosomal membrane (ortholog); neuronal cell body (ortholog) NW_004955433 16086747 16100185 - 102016190 AGCD01031785;GBDJ01127120;XM_013516230;XM_013516231 XP_013371684;XP_013371685 MODEL 8729616 protein-coding LOC102014140 olfactory receptor 4C12-like NW_004955422 189242 205026 - 102014140 AGCD01022401;GBDF01176192;XM_005383941;XM_013514328 XP_005383998;XP_013369782 MODEL 9051180 protein-coding LOC102010985 C-type lectin domain family 2 member F-like NW_004955413 7883706 7902234 + 102010985 AGCD01013835;GBDK01420751;XM_013511366;XM_013511367 XP_013366820;XP_013366821 MODEL 8770878 protein-coding Bpifa1 BPI fold containing family A member 1 INVOLVED IN killing of cells of another organism; positive regulation of acute inflammatory response; surfactant homeostasis; ASSOCIATED WITH Inflammation; Breast Cancer, Familial (ortholog); fetal alcohol spectrum disorder (ortholog); FOUND IN extracellular region; microvillus (ortholog) NW_004955422 28063077 28069939 - 102030434 AGCD01023343;FJ830605;GBBH01004310;NM_001282365;XM_013513811;XM_013513812;XM_013513813 ACZ02414;NP_001269294;XP_013369265;XP_013369266;XP_013369267 PROVISIONAL 8804924 protein-coding LOC102010212 olfactory receptor 2B6-like NW_004955576 1169060 1171950 - 102010212 AGCD01075362;XM_005413949 XP_005414006 MODEL 8955615 pseudo LOC102003162 cyclin-dependent kinase 11B pseudogene NW_004955428 12919987 12929693 + 102003162 AGCD01027939;XM_005386732 MODEL 8733592 protein-coding Rdh11 retinol dehydrogenase 11 ENCODES a protein that exhibits 11-cis-retinol dehydrogenase (NADP+) activity (ortholog); aldehyde dehydrogenase (NADP+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN cellular detoxification of aldehyde (ortholog); retinal metabolic process (ortholog); retinoid metabolic process (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Retinal Dystrophy, Juvenile Cataracts, and Short Stature Syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment membrane (ortholog) NW_004955466 2506641 2521506 + 102011294 AGCD01050740;AGCD01050741;AGCD01050742;GBDI01113403;XM_005399068 XP_005399125 MODEL 8997329 ncrna LOC102012202 uncharacterized LOC102012202 NW_004955420 8650206 8667134 - 102012202 AGCD01020729;AGCD01020730;GBDF01286252;XR_260684 MODEL 39131881 rrna 5S_rRNA 5S ribosomal RNA 8845212 protein-coding Amdhd2 amidohydrolase domain containing 2 ENCODES a protein that exhibits N-acetylgalactosamine-6-phosphate deacetylase activity (ortholog); N-acetylglucosamine-6-phosphate deacetylase activity (ortholog); INVOLVED IN negative regulation of UDP-N-acetylglucosamine biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 14775528 14791650 - 102021805 AGCD01037839;GBDK01061652;XM_013517941;XM_013517942;XM_013517943;XM_013517944 XP_013373395;XP_013373396;XP_013373397;XP_013373398 MODEL 39131309 protein-coding CD99L2 CD99 molecule like 2 9032245 protein-coding LOC102009028 uncharacterized LOC102009028 NW_004955411 2334442 2389596 - 102009028 AGCD01011505;AGCD01011506;XM_013510712 XP_013366166 MODEL 8971403 protein-coding Avpi1 arginine vasopressin induced 1 INVOLVED IN positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Lung Neoplasms (ortholog); uterine carcinosarcoma (ortholog) NW_004955507 3760228 3768320 - 102029770 AGCD01065635;GBDK01423207;XM_005407619;XM_013506192 XP_005407676;XP_013361646 MODEL 9012513 pseudo LOC102011829 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955402 1161682 1162083 - 102011829 AGCD01000049;XM_005373139 MODEL 9002324 protein-coding Il27ra interleukin 27 receptor subunit alpha ENCODES a protein that exhibits interleukin-27 receptor activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cellular extravasation (ortholog); negative regulation of interleukin-17 production (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); cervical cancer (ortholog); FOUND IN humanin receptor complex (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955415 32749682 32762532 + 102009171 AGCD01016732;GBBH01006488;XM_005381079;XM_005381080;XM_005381081;XM_005381082 XP_005381136;XP_005381137;XP_005381138;XP_005381139 MODEL 8832485 protein-coding LOC102018388 zinc finger protein 791-like NW_004955415 33148948 33168071 - 102018388 AGCD01016753;AGCD01016754;GBDF01124083;XM_005381109;XM_005381111;XM_013512175;XM_013512176 XP_005381166;XP_005381168;XP_013367629;XP_013367630 MODEL 8790802 protein-coding Abca6 ATP binding cassette subfamily A member 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); colon adenocarcinoma (ortholog); FOUND IN Golgi membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955478 3639817 3706115 + 102023693 AGCD01055828;AGCD01055829;AGCD01055830;GBCE01081913;XM_005402108;XM_005402109;XM_005402110 XP_005402165;XP_005402166;XP_005402167 MODEL 8760506 protein-coding Adcy8 adenylate cyclase 8 ENCODES a protein that exhibits actin binding (ortholog); adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cAMP/PKA signal transduction (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); diabetic angiopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955461 5497708 5725574 - 102009359 AGCD01048884;AGCD01048885;GBDF01296763;XM_005398002;XM_005398003;XM_005398004 XP_005398059;XP_005398060;XP_005398061 MODEL 9031766 protein-coding LOC102009791 uncharacterized LOC102009791 NW_004955648 46741 47626 - 102009791 AGCD01077769;GBDF01075664;XM_005415051 XP_005415108 MODEL 8860223 pseudo LOC102014141 transmembrane protein 183A-like NW_004955422 11446152 11447336 - 102014141 AGCD01022757 MODEL 8915277 protein-coding LOC102004582 vomeronasal type-1 receptor 4-like NW_004955465 12768775 12769713 + 102004582 AGCD01050559;XM_005398944 XP_005399001 MODEL 39134086 misc_rna 7SK 7SK RNA 8705053 protein-coding Prlh prolactin releasing hormone ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); prolactin-releasing peptide receptor binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); eating behavior (ortholog); energy reserve metabolic process (ortholog); PARTICIPATES IN obesity pathway; ASSOCIATED WITH obesity (ortholog); FOUND IN cytoplasm (ortholog) NW_004955542 2765578 2768057 - 102008030 AGCD01071537;GBDK01287743;XM_005411227 XP_005411284 MODEL 8892110 protein-coding C2cd3 C2 domain containing 3 centriole elongation regulator INVOLVED IN brain development (ortholog); centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955414 17444299 17557912 + 102008934 AGCD01015241;AGCD01015242;AGCD01015243;GBDF01118457;XM_013511935;XM_013511936;XM_013511937 XP_013367389;XP_013367390;XP_013367391 MODEL 39132140 rrna 5S_rRNA 5S ribosomal RNA 8891689 protein-coding Lpp LIM domain containing preferred translocation partner in lipoma PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955420 19014398 19634102 - 102020674 AGCD01021053;AGCD01021054;AGCD01021055;AGCD01021056;AGCD01021057;AGCD01021058;AGCD01021059;AGCD01021060;AGCD01021061;AGCD01021062;AGCD01021063;AGCD01021064;AGCD01021065;AGCD01021066;GBDK01265106;XM_005383241;XM_005383243 XP_005383298;XP_005383300 MODEL 9029450 protein-coding Ccdc107 coiled-coil domain containing 107 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955472 636633 640198 - 102010051 AGCD01053344;GBDI01070373;XM_005401010 XP_005401067 MODEL 8990704 protein-coding Firrm FIGNL1 interacting regulator of recombination and mitosis ENCODES a protein that exhibits protein kinase binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN chromosome segregation (ortholog); DNA recombinase disassembly (ortholog); double-strand break repair involved in meiotic recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); DNA repair complex (ortholog); kinetochore (ortholog) NW_004955462 7477260 7518227 - 102008071 AGCD01049305;GBDI01326759;XM_013521413;XM_013521414 XP_013376867;XP_013376868 MODEL 8933510 ncrna LOC102008623 uncharacterized LOC102008623 NW_004955479 10170741 10180244 - 102008623 AGCD01056526;AGCD01056527;GBDI01103470;XR_263739 MODEL 8962552 protein-coding Cfap36 cilia and flagella associated protein 36 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN ciliary base (ortholog); ciliary transition zone (ortholog) NW_004955424 27522324 27547437 - 102006685 AGCD01025118;AGCD01025119;GBDF01008484;XM_005385771 XP_005385828 MODEL 8793820 protein-coding Acox1 acyl-CoA oxidase 1 ENCODES a protein that exhibits acyl-CoA oxidase activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Charcot-Marie-Tooth disease axonal type 2K (ortholog); FOUND IN cytoplasm (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) NW_004955506 6286824 6309764 + 102007679 AGCD01065411;GBCB01041555;GBDF01163252;XM_005407465 XP_005407522 MODEL 8852292 ncrna LOC102003164 uncharacterized LOC102003164 NW_004955428 25464176 25472249 + 102003164 AGCD01028284;GBDF01123213;XR_261308 MODEL 8933076 ncrna LOC102004954 uncharacterized LOC102004954 NW_004955429 12838202 12852498 + 102004954 AGCD01028732;GBDI01266187;XR_261326 MODEL 8855920 protein-coding Sgo2 shugoshin 2 INVOLVED IN female meiotic nuclear division (ortholog); intracellular protein localization (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) NW_004955403 879354 905605 - 102005871 AGCD01001709;AGCD01001710;AGCD01001711;GBDF01051842;XM_005373247;XM_005373248;XM_013511911 XP_005373304;XP_005373305;XP_013367365 MODEL 8970657 protein-coding Atg5 autophagy related 5 ENCODES a protein that exhibits Atg8-family ligase activity (ortholog); INVOLVED IN aggrephagy (ortholog); antigen processing and presentation of endogenous antigen (ortholog); autophagosome assembly (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); anemia (ortholog); autosomal recessive spinocerebellar ataxia 25 (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); axon (ortholog) NW_004955411 31501191 31646407 - 102005783 AGCD01012273;AGCD01012274;AGCD01012275;AGCD01012276;GBDI01366371;XM_005377828;XM_013510873;XM_013510874;XM_013510875;XM_013510876 XP_005377885;XP_013366327;XP_013366328;XP_013366329;XP_013366330 MODEL 8898080 protein-coding Rspo1 R-spondin 1 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN male meiotic nuclear division (ortholog); negative regulation of eating behavior (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH genetic disease (ortholog); lung cancer (ortholog); obesity (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog) NW_004955452 15415417 15435616 - 102012602 AGCD01044486;GBDK01265544;XM_005395212;XM_005395213 XP_005395269;XP_005395270 MODEL 8887516 protein-coding Plpp6 phospholipid phosphatase 6 ENCODES a protein that exhibits farnesyl diphosphatase activity (ortholog); hydrolase activity (ortholog); isoprenoid diphosphate phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); farnesyl diphosphate catabolic process (ortholog); geranyl diphosphate metabolic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955434 8953069 8955866 + 102024606 AGCD01032281;GBCE01162872;XM_005415386 XP_005415443 MODEL 8756240 protein-coding Sorcs3 sortilin related VPS10 domain containing receptor 3 INVOLVED IN learning (ortholog); memory (ortholog); positive regulation of synaptic transmission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) NW_004955485 5474081 6048912 - 102013176 AGCD01058597;AGCD01058598;AGCD01058599;AGCD01058600;AGCD01058601;AGCD01058602;AGCD01058603;AGCD01058604;AGCD01058605;GBDF01016069;XM_005403919 XP_005403976 MODEL 39134226 misc_rna 7SK 7SK RNA 8984425 pseudo LOC102007117 pre-mRNA-splicing factor 38A pseudogene NW_004955476 3480571 3481491 - 102007117 AGCD01055252 MODEL 8749301 protein-coding LOC102022480 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase NW_004955465 3703513 3740356 - 102022480 AGCD01050388;AGCD01050389;GBBH01089251;XM_005398839 XP_005398896 MODEL 8883029 protein-coding Ercc6l ERCC excision repair 6 like DNA helicase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA translocase activity (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog) NW_004955475 11596405 11629186 - 102012755 AGCD01055158;AGCD01055159;AGCD01055160;AGCD01055161;AGCD01055162;GBDI01367112;XM_005401684 XP_005401741 MODEL 39133954 misc_rna 7SK 7SK RNA 15036840 trna Trnar-gcg transfer RNA arginine (anticodon GCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978838 8758835 protein-coding LOC102008260 PDZ domain-containing protein MAGIX NW_004955543 651286 655627 + 102008260 AGCD01071596;GBCE01116897;XM_005411322;XM_013508147;XM_013508148 XP_005411379;XP_013363601;XP_013363602 MODEL 39131882 rrna 5S_rRNA 5S ribosomal RNA 8803409 protein-coding Prlhr prolactin releasing hormone receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adult feeding behavior (ortholog); feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN obesity pathway; ASSOCIATED WITH esophageal cancer (ortholog); hypertension (ortholog); obesity (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cilium (ortholog) NW_004955431 23192018 23193130 - 102004506 AGCD01030532;XM_005387879 XP_005387936 MODEL 8927324 protein-coding Amelx amelogenin X-linked ENCODES a protein that exhibits calcium ion binding (ortholog); growth factor activity (ortholog); hydroxyapatite binding (ortholog); INVOLVED IN amelogenesis (ortholog); cell adhesion (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1E (ortholog); autosomal dominant hypocalcemia (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endocytic vesicle (ortholog) NW_004955544 1974889 1979063 - 102009545 AGCD01071732;XM_005411402 XP_005411459 MODEL 8864798 protein-coding LOC102009030 olfactory receptor 8B12-like NW_004955412 25540272 25542114 - 102009030 AGCD01013160;GBDI01315433;XM_005378423 XP_005378480 MODEL 8960374 protein-coding Anxa13 annexin A13 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of Golgi to plasma membrane protein transport (ortholog); positive regulation of Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955540 2482499 2561569 - 102005508 AGCD01071321;GBDF01252876;XM_005410935;XM_005410936;XM_005410937;XM_013507926 XP_005410992;XP_005410993;XP_005410994;XP_013363380 MODEL 8904475 pseudo LOC102004220 protein quaking-like NW_004955591 59735 61241 + 102004220 AGCD01076238;AGCD01076239 MODEL 8782194 pseudo LOC102013771 protein FRG1 pseudogene NW_004955446 2803183 2803945 - 102013771 AGCD01039987 MODEL 8746306 protein-coding LOC102013406 olfactory receptor 6-like NW_004955414 22692862 22693770 - 102013406 AGCD01015471;GBBH01130436;XM_005380511 XP_005380568 MODEL 39131399 protein-coding CDX2 caudal type homeobox 2 8815895 protein-coding Ahnak AHNAK nucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); S100 protein binding (ortholog); structural molecule activity conferring elasticity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); Chloracne (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell contact zone (ortholog); costamere (ortholog) NW_004955599 629271 656564 + 102017409 AGCD01076663;AGCD01076664;AGCD01076665;GBBH01025974;XM_013510061 XP_013365515 MODEL 8994392 protein-coding Slc38a8 solute carrier family 38 member 8 INVOLVED IN aspartate metabolic process (ortholog); neuron projection development (ortholog); optic nerve development (ortholog); ASSOCIATED WITH Albinism (ortholog); cellulitis (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog) NW_004955564 233796 252565 + 102021608 AGCD01074192;AGCD01074193;GBDF01041455;XM_005413230 XP_005413287 MODEL 9015286 protein-coding Wdr70 WD repeat domain 70 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN spliceosomal complex (ortholog); U2-type catalytic step 1 spliceosome (ortholog) NW_004955426 22062872 22344596 + 102016728 AGCD01026604;AGCD01026605;AGCD01026606;AGCD01026607;AGCD01026608;AGCD01026609;AGCD01026610;AGCD01026611;AGCD01026612;AGCD01026613;AGCD01026614;AGCD01026615;AGCD01026616;GBDF01125379;XM_013514960;XM_013514961 XP_013370414;XP_013370415 MODEL 8964676 protein-coding Adcy9 adenylate cyclase 9 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955442 13310289 13433816 + 102007474 AGCD01037770;AGCD01037771;AGCD01037772;AGCD01037773;AGCD01037774;GBCB01024399;XM_013517879;XM_013517880 XP_013373333;XP_013373334 MODEL 39131313 protein-coding CYFIP1 cytoplasmic FMR1 interacting protein 1 8969219 ncrna LOC102004585 uncharacterized LOC102004585 NW_004955466 1410513 1420772 - 102004585 AGCD01050705;GBDF01121150;XR_263275 MODEL 8954285 pseudo LOC102006015 cysteine-rich PDZ-binding protein pseudogene NW_004955469 267316 267629 + 102006015 AGCD01052216;XR_263422 MODEL 8808078 protein-coding Rdh12 retinol dehydrogenase 12 ENCODES a protein that exhibits 11-cis-retinol dehydrogenase (NADP+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN cellular detoxification of aldehyde (ortholog); retinol metabolic process (ortholog); visual perception (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); Leber congenital amaurosis (ortholog); FOUND IN ciliary transition zone (ortholog); endoplasmic reticulum membrane (ortholog); photoreceptor inner segment (ortholog) NW_004955466 2473145 2485779 - 102010351 AGCD01050739;GBCE01139121;XM_005399065 XP_005399122 MODEL 8791664 protein-coding Cd99l2 CD99 molecule like 2 INVOLVED IN diapedesis (ortholog); homotypic cell-cell adhesion (ortholog); positive regulation of neutrophil extravasation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN adherens junction (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955498 6529039 6591728 - 102004181 AGCD01063114;AGCD01063115;AGCD01063116;AGCD01063117;AGCD01063118;GBCB01002845;XM_013505530 XP_013360984 MODEL 39131543 protein-coding CLEC7A C-type lectin domain containing 7A 8931922 protein-coding Ercc6l2 ERCC excision repair 6 like 2 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); DNA damage response (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); atrial heart septal defect (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) NW_004955422 22753008 22890339 + 102007243 AGCD01023165;AGCD01023166;AGCD01023167;AGCD01023168;AGCD01023169;AGCD01023170;AGCD01023171;AGCD01023172;GBDJ01044876;XM_005384686;XM_013514250;XM_013514251;XM_013514252 XP_005384743;XP_013369704;XP_013369705;XP_013369706 MODEL 9058948 protein-coding Ccdc110 coiled-coil domain containing 110 ASSOCIATED WITH dilated cardiomyopathy (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955403 23593610 23616959 + 102026278 AGCD01002248;GBCB01008937;XM_005373462 XP_005373519 MODEL 8787737 ncrna LOC102008635 uncharacterized LOC102008635 NW_004955493 5964146 5970478 + 102008635 AGCD01061081;GBBH01168010;XR_264086 MODEL 9053400 protein-coding Avpr1a arginine vasopressin receptor 1A ENCODES a protein that exhibits peptide hormone binding (ortholog); V1A vasopressin receptor binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to water deprivation (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 1; ASSOCIATED WITH acute kidney failure (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); plasma membrane (ortholog) NW_004955458 10245325 10253209 - 102007518 AGCD01047677;GBDF01125391;GBDJ01409936;XM_013520787 XP_013376241 MODEL 8760901 protein-coding Arf6 ARF GTPase 6 ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); endocytic recycling (ortholog); PARTICIPATES IN E-cadherin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Failure to Thrive (ortholog); intellectual disability (ortholog); sarcoma (ortholog); FOUND IN cell cortex (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955409 12814814 12818142 - 102026724 AGCD01009567;GBCE01001245;GBDF01002353;XM_005376832 XP_005376889 MODEL 9029231 protein-coding Il2ra interleukin 2 receptor subunit alpha ENCODES a protein that exhibits interleukin-2 binding (ortholog); interleukin-2 receptor activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); interleukin-2 receptor complex (ortholog) NW_004955421 22642004 22694729 - 102029977 AGCD01022143;AGCD01022144;AGCD01022145;AGCD01022146;GBDJ01194803;XM_005383859;XM_005383860;XM_013513633 XP_005383916;XP_005383917;XP_013369087 MODEL 8891171 protein-coding Bpifa3 BPI fold containing family A member 3 ASSOCIATED WITH sarcoma (ortholog) NW_004955422 28076137 28087162 - 102003034 AGCD01023343;GBDF01046147;XM_005384851 XP_005384908 MODEL 8748540 protein-coding Dnaaf9 dynein axonemal assembly factor 9 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955415 14148462 14276908 - 102026314 AGCD01016290;AGCD01016291;AGCD01016292;AGCD01016293;AGCD01016294;GBDF01153783;XM_005380792;XM_013512268 XP_005380849;XP_013367722 MODEL 8808126 pseudo LOC102010986 tubulin polyglutamylase complex subunit 2 pseudogene NW_004955468 4276509 4282049 + 102010986 AGCD01051904 MODEL 8824148 protein-coding Abca7 ATP binding cassette subfamily A member 7 ENCODES a protein that exhibits apolipoprotein A-I receptor activity (ortholog); ATPase-coupled intramembrane lipid carrier activity (ortholog); floppase activity (ortholog); INVOLVED IN amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta formation (ortholog); apolipoprotein A-I-mediated signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Alzheimer's disease 9 (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955495 6818002 6838177 - 102013842 AGCD01062097;GBBH01062757;XM_013505096;XM_013505097;XM_013505098;XM_013505099;XM_013505100;XM_013505101;XM_013505102 XP_013360550;XP_013360551;XP_013360552;XP_013360553;XP_013360554;XP_013360555;XP_013360556 MODEL 8738033 protein-coding Sgpl1 sphingosine-1-phosphate lyase 1 ENCODES a protein that exhibits sphinganine-1-phosphate aldolase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); apoptotic signaling pathway (ortholog); ceramide metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Adrenal Insufficiency (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 20489641 20547105 - 102009318 AGCD01034874;AGCD01034875;AGCD01034876;AGCD01034877;GBCE01031815;XM_005390043;XM_013517017 XP_005390100;XP_013372471 MODEL 8906377 pseudo LOC102009792 MAP/microtubule affinity-regulating kinase 3-like NW_004955403 31079581 31081821 + 102009792 AGCD01002411 MODEL 8759866 protein-coding Atg7 autophagy related 7 ENCODES a protein that exhibits Atg12 activating enzyme activity (ortholog); Atg8 activating enzyme activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adult walking behavior (ortholog); autophagosome assembly (ortholog); autophagy (ortholog); PARTICIPATES IN autophagy pathway; mitochondrial autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-associated liver disease (ortholog); alcoholic cardiomyopathy (ortholog); FOUND IN autophagosome (ortholog); axon (ortholog); axoneme (ortholog) NW_004955429 14076976 14301034 + 102016501 AGCD01028775;AGCD01028776;AGCD01028777;AGCD01028778;GBBH01050748;XM_005387012 XP_005387069 MODEL 8852628 ncrna LOC102010215 uncharacterized LOC102010215 NW_004955449 8016115 8072779 - 102010215 AGCD01042007;AGCD01042008;XR_262494 MODEL 8729790 protein-coding Plpp7 phospholipid phosphatase 7 (inactive) ENCODES a protein that exhibits lipid phosphatase activity (ortholog); INVOLVED IN negative regulation of myotube differentiation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955513 1081748 1092025 + 102021379 AGCD01066840;AGCD01066841;GBCB01005805;XM_005408361 XP_005408418 MODEL 8715561 ncrna LOC102014142 uncharacterized LOC102014142 NW_004955422 14683499 14685264 + 102014142 AGCD01022863;GBDF01252177;XR_001233942 MODEL 39134087 misc_rna 7SK 7SK RNA 39133955 misc_rna 7SK 7SK RNA 8706583 protein-coding LOC102012203 dual specificity protein phosphatase 5-like NW_004955485 904628 909295 - 102012203 AGCD01058465;GBDK01430993;XM_005403917 XP_005403974 MODEL 8713038 protein-coding C2cd4c C2 calcium dependent domain containing 4C FOUND IN cytosol (ortholog) NW_004955495 7236627 7243099 + 102025260 AGCD01062125;GBDF01192259;XM_005406041 XP_005406098 MODEL 9055335 protein-coding Fis1 fission, mitochondrial 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to lipid (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); chronic kidney disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); peroxisomal membrane (ortholog) NW_004955456 16057158 16060623 + 102022568 AGCD01046686;GBBH01162039;XM_005396858 XP_005396915 MODEL 8729758 pseudo LOC102018393 U3 small nucleolar RNA-associated protein 15 homolog NW_004955416 25347769 25351583 - 102018393 AGCD01017587 MODEL 39131883 rrna 5S_rRNA 5S ribosomal RNA 39133956 misc_rna 7SK 7SK RNA 8778180 protein-coding Rdh13 retinol dehydrogenase 13 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN eye photoreceptor cell development (ortholog); response to high light intensity (ortholog); retina layer formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955567 1091636 1108648 + 102007379 AGCD01074459;AGCD01074460;GBBH01076835;XM_005413365;XM_005413366 XP_005413422;XP_005413423 MODEL 9058378 protein-coding Amer1 APC membrane recruitment protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); beta-catenin destruction complex binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); kidney development (ortholog); ASSOCIATED WITH cleft palate (ortholog); colorectal cancer (ortholog); complex cortical dysplasia with other brain malformations (ortholog); FOUND IN nuclear body (ortholog); plasma membrane (ortholog) NW_004955475 4451094 4470750 + 102004699 AGCD01054880;GBDI01368674;XM_005401556;XM_005401557;XM_005401558;XM_005401559;XM_005401560;XM_013502871 XP_005401613;XP_005401614;XP_005401615;XP_005401616;XP_005401617;XP_013358325 MODEL 9065594 ncrna LOC102007503 uncharacterized LOC102007503 NW_004955453 6872218 6875092 - 102007503 AGCD01044732;GBDF01261600;XR_001236134 MODEL 39134227 misc_rna 7SK 7SK RNA 9009426 protein-coding Ereg epiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholesteatoma (ortholog); erythropoietic protoporphyria (ortholog); FOUND IN extracellular region (ortholog) NW_004955474 612440 627606 + 102006571 AGCD01054224;GBCC01052167;XM_005401312 XP_005401369 MODEL 8735089 protein-coding LOC102013407 uncharacterized LOC102013407 NW_004955415 13302201 13314397 + 102013407 AGCD01016246;GBDF01006431;XM_005380747;XM_005380748;XM_005380749;XR_001233193;XR_001233194;XR_001233195;XR_001233196;XR_260288 XP_005380804;XP_005380805;XP_005380806 MODEL 39132143 rrna 5S_rRNA 5S ribosomal RNA 9036369 protein-coding Sord sorbitol dehydrogenase ENCODES a protein that exhibits (R,R)-butanediol dehydrogenase activity (ortholog); D-xylulose reductase activity (ortholog); identical protein binding (ortholog); INVOLVED IN D-glucuronate catabolic process (ortholog); D-sorbitol catabolic process (ortholog); D-sorbitol metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 8 (ortholog); Breast Cancer, Familial (ortholog); cataract (ortholog); FOUND IN cytosol (ortholog); extracellular exosome (ortholog); membrane (ortholog) NW_004955409 8305819 8333733 - 102024653 AGCD01009393;AGCD01009394;GBCQ01010097;XM_005376745;XM_013510316 XP_005376802;XP_013365770 MODEL 8946228 protein-coding Lpxn leupaxin ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of cell adhesion (ortholog); regulation of cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955511 3459521 3500181 - 102003676 AGCD01066461;AGCD01066462;AGCD01066463;AGCD01066464;GBDJ01229881;XM_005408039;XM_005408040;XM_013506480;XM_013506481;XM_013506483 XP_005408096;XP_005408097;XP_013361934;XP_013361935;XP_013361937 MODEL 9059391 protein-coding Wdr72 WD repeat domain 72 INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta hypomaturation type 2A3 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endosome (ortholog) NW_004955409 1451506 1631976 + 102016672 AGCD01009176;AGCD01009177;AGCD01009178;AGCD01009179;AGCD01009180;GBCQ01031346;XM_005376626;XM_013510272;XM_013510273;XM_013510274 XP_005376683;XP_013365726;XP_013365727;XP_013365728 MODEL 8728259 protein-coding LOC102009793 uncharacterized LOC102009793 NW_004955451 10468343 10479347 + 102009793 AGCD01043324;XM_013519062 XP_013374516 MODEL 8758171 protein-coding LOC102011830 leucine-rich repeat-containing protein 37A3-like NW_004955651 5178 17838 + 102011830 AGCD01077802;AGCD01077803;AGCD01077804;AGCD01077805;AGCD01077806;AGCD01077807;AGCD01077808;GBDF01009797;XM_013510174 XP_013365628 MODEL 8858256 protein-coding Cfap410 cilia and flagella associated protein 410 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); axial spondylometaphyseal dysplasia (ortholog); cone-rod dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955407 41120820 41128089 + 102026604 AGCD01007856;GBDF01192997;XM_005375863 XP_005375920 MODEL 9019728 protein-coding LOC102004956 olfactory receptor 5B2-like NW_004955511 3124063 3128525 - 102004956 AGCD01066444;XM_013506383 XP_013361837 MODEL 39134088 misc_rna 7SK 7SK RNA 8812642 protein-coding Clec9a C-type lectin domain containing 9A INVOLVED IN positive regulation of cytokine production (ortholog); receptor-mediated endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cell surface (ortholog) NW_004955413 7787663 7808761 - 102009365 AGCD01013831;GBBH01099244;XM_005378940 XP_005378997 MODEL 8796704 protein-coding Anxa2 annexin A2 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); bone sialoprotein binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); body fluid secretion (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN AnxA2-p11 complex (ortholog); basolateral plasma membrane (ortholog); cell cortex (ortholog) NW_004955450 14545586 14574161 + 102009669 AGCD01042751;AGCD01042752;GBCB01023488;GBCE01001542;XM_013518924 XP_013374378 MODEL 9052289 protein-coding Ccdc112 coiled-coil domain containing 112 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centriolar satellite (ortholog) NW_004955408 35052985 35069032 - 102021853 AGCD01008929;GBCB01026249;GBCE01162945;XM_005415358;XM_013506914 XP_005415415;XP_013362368 MODEL 8889751 protein-coding Fitm1 fat storage inducing transmembrane protein 1 ENCODES a protein that exhibits diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955409 36267121 36268462 - 102011845 AGCD01010454;GBDK01305527;XM_005377045 XP_005377102 MODEL 8790683 protein-coding Cdx2 caudal type homeobox 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blastocyst development (ortholog); blood vessel development (ortholog); ASSOCIATED WITH Adenomatous Polyps (ortholog); Anorectal Malformations (ortholog); Barrett's esophagus (ortholog); FOUND IN condensed nuclear chromosome (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955497 7316372 7321627 - 102016723 AGCD01062666;AGCD01062667;XM_005406380 XP_005406437 MODEL 8719140 pseudo LOC102007118 casein kinase I isoform alpha pseudogene NW_004955416 10129649 10130798 + 102007118 AGCD01017109 MODEL 8708731 ncrna LOC102022481 uncharacterized LOC102022481 NW_004955465 10453747 10455158 + 102022481 AGCD01050510;GBCQ01164306;XR_263266 MODEL 8985544 protein-coding Slc38a9 solute carrier family 38 member 9 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to amino acid stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955446 12042848 12132211 + 102016114 AGCD01040222;AGCD01040223;AGCD01040224;AGCD01040225;GBBH01113101;XM_005392695;XM_013518400;XM_013518401;XM_013518402;XM_013518403;XM_013518404 XP_005392752;XP_013373854;XP_013373855;XP_013373856;XP_013373857;XP_013373858 MODEL 8857676 protein-coding Dnah1 dynein axonemal heavy chain 1 INVOLVED IN cilium movement involved in cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN axoneme (ortholog); inner dynein arm (ortholog); sperm flagellum (ortholog) NW_004955430 2323928 2391470 + 102015430 AGCD01029164;AGCD01029165;GBDF01087600;XM_005387314;XM_013515571 XP_005387371;XP_013371025 MODEL 8782775 protein-coding LOC102008265 keratin, type II cuticular Hb6 NW_004955547 2650341 2656801 + 102008265 AGCD01072290;AGCD01072291;GBDF01140560;XM_005411939 XP_005411996 MODEL 8941054 protein-coding Sgpp1 sphingosine-1-phosphate phosphatase 1 ENCODES a protein that exhibits dihydrosphingosine-1-phosphate phosphatase activity (ortholog); sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955466 6075507 6103739 + 102019255 AGCD01050906;AGCD01050907;GBDF01223287;XM_013522009 XP_013377463 MODEL 8801082 protein-coding LOC102003167 olfactory receptor 5D13-like NW_004955511 533129 545086 + 102003167 AGCD01066333;XM_005408198 XP_005408255 MODEL 9055522 protein-coding LOC102004594 olfactory receptor 51E1-like NW_004955414 21006945 21009431 + 102004594 AGCD01015401;AGCD01015402;XM_005380490 XP_005380547 MODEL 8806398 protein-coding Acox2 acyl-CoA oxidase 2 ENCODES a protein that exhibits 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity (ortholog); fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN peroxisome (ortholog) NW_004955430 1638931 1665308 + 102006263 AGCD01029130;GBDJ01052486;XM_005387286 XP_005387343 MODEL 8736405 protein-coding LOC102006019 olfactory receptor 51I2-like NW_004955414 21379795 21380742 - 102006019 AGCD01015417;XM_005380088 XP_005380145 MODEL 8790754 protein-coding Cda cytidine deaminase ENCODES a protein that exhibits cytidine deaminase activity (ortholog); identical protein binding (ortholog); nucleoside binding (ortholog); INVOLVED IN cellular response to external biotic stimulus (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN cytosol (ortholog) NW_004955452 1131968 1156777 + 102020194 AGCD01043832;AGCD01043833;GBCQ01064996;XM_005394682 XP_005394739 MODEL 8731399 protein-coding Plppr1 phospholipid phosphatase related 1 ENCODES a protein that exhibits lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN nervous system development (ortholog); phospholipid dephosphorylation (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN neuron projection (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955419 24544868 24809419 - 102010266 AGCD01020350;AGCD01020351;AGCD01020352;AGCD01020353;AGCD01020354;AGCD01020355;AGCD01020356;GBCE01026760;XM_005382804;XM_005382805;XM_013513312 XP_005382861;XP_005382862;XP_013368766 MODEL 8791764 ncrna LOC102009031 uncharacterized LOC102009031 NW_004955413 3100551 3144356 - 102009031 AGCD01013567;AGCD01013568;GBBH01229827;XR_001233023;XR_001233024;XR_001233025;XR_001233026;XR_001233027 MODEL 8923870 protein-coding Prlr prolactin receptor ENCODES a protein that exhibits lipid binding (ortholog); peptide hormone binding (ortholog); prolactin receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); lactation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog) NW_004955426 20161406 20326688 - 102007036 AGCD01026564;AGCD01026565;AGCD01026566;GBDI01208671;XM_005386193;XM_005386194;XM_005386195;XM_013515018 XP_005386250;XP_005386251;XP_005386252;XP_013370472 MODEL 8907701 pseudo LOC102013772 transformer-2 protein homolog alpha-like NW_004955446 12839992 12840785 - 102013772 AGCD01040244 MODEL 8823812 protein-coding LOC102004222 zinc finger protein 75D-like NW_004955602 279198 334998 + 102004222 AGCD01076768;AGCD01076769;AGCD01076770;AGCD01076771;AGCD01076772;AGCD01076773;AGCD01076774;AGCD01076775;AGCD01076776;GBDF01124561;XM_005414830;XM_005414831 XP_005414887;XP_005414888 MODEL 8994308 ncrna LOC102018395 uncharacterized LOC102018395 NW_004955417 9450900 9469286 + 102018395 AGCD01018052;GBDF01211316;XR_001233466;XR_260468 MODEL 8903845 protein-coding Cfap418 cilia and flagella associated protein 418 INVOLVED IN photoreceptor cell morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome 21 (ortholog); cervical cancer (ortholog); FOUND IN ciliary base (ortholog); cytoplasm (ortholog); photoreceptor inner segment (ortholog) NW_004955417 11357367 11381287 - 102004385 AGCD01018130;AGCD01018131;GBCQ01125394;XM_005381829;XM_013512799;XM_013512800;XR_001233445;XR_001233446 XP_005381886;XP_013368253;XP_013368254 MODEL 9001375 protein-coding LOC102004957 ral guanine nucleotide dissociation stimulator-like NW_004955430 7909582 7912000 - 102004957 AGCD01029377;GBDF01163102;XM_013515594 XP_013371048 MODEL 8903392 protein-coding LOC102008637 C-type lectin domain family 2 member L NW_004955494 3562862 3573552 - 102008637 AGCD01061476;AGCD01061477;GBCE01072603;GBCQ01101254;XM_013504909 XP_013360363 MODEL 39134089 misc_rna 7SK 7SK RNA 8880931 protein-coding Bpifb1 BPI fold containing family B member 1 INVOLVED IN innate immune response in mucosa (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 27955298 27976051 - 102029304 AGCD01023340;GBDI01017648;XM_005384845;XM_005384846 XP_005384902;XP_005384903 MODEL 8740725 protein-coding Abca9 ATP binding cassette subfamily A member 9 ASSOCIATED WITH Colorectal Neoplasms (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955478 3718494 3785147 + 102025460 AGCD01055830;AGCD01055831;GBCE01034596;XM_005402114;XM_005402115 XP_005402171;XP_005402172 MODEL 8718744 protein-coding Adcyap1 adenylate cyclase activating polypeptide 1 ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); peptide hormone receptor binding (ortholog); pituitary adenylate cyclase activating polypeptide activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); behavioral fear response (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alcohol dependence (ortholog); Brain Injuries (ortholog); FOUND IN extracellular region (ortholog); neuronal dense core vesicle lumen (ortholog); terminal bouton (ortholog) NW_004955402 9091927 9099803 - 102021292 AGCD01000205;XM_005372667;XM_005372668 XP_005372724;XP_005372725 MODEL 10384357 pseudo LOC102010218 Ig heavy chain V-III region 23-like NW_004957635 267 750 + 102010218 AGCD01081031 MODEL 8978582 protein-coding Atg9a autophagy related 9A ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); bone morphogenesis (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebrotendinous xanthomatosis (ortholog); cervical cancer (ortholog); FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955453 14203798 14214760 + 102013377 AGCD01044859;GBDJ01131454;XM_005395551;XM_013519837;XM_013519838;XM_013519839;XM_013519840;XM_013519841;XM_013519842;XM_013519843;XM_013519844;XM_013519845;XM_013519846;XM_013519847;XM_013519848 XP_005395608;XP_013375291;XP_013375292;XP_013375293;XP_013375294;XP_013375295;XP_013375296;XP_013375297;XP_013375298;XP_013375299;XP_013375300;XP_013375301;XP_013375302 MODEL 8792461 protein-coding LOC102014144 putative vomeronasal receptor-like protein 4 NW_004955494 8313356 8317792 + 102014144 AGCD01061582;XM_005405546 XP_005405603 MODEL 8843225 protein-coding Sorl1 sortilin related receptor 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); cargo receptor activity (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); cell migration (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Alzheimer's disease 9 (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); early endosome membrane (ortholog) NW_004955412 22421984 22576179 + 102015704 AGCD01013047;AGCD01013048;AGCD01013049;AGCD01013050;AGCD01013051;AGCD01013052;GBBH01091931;XM_005378364 XP_005378421 MODEL 9007267 protein-coding Avpr1b arginine vasopressin receptor 1B ENCODES a protein that exhibits identical protein binding (ortholog); peptide hormone binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); intracellular pH reduction (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN dendrite (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955406 41706088 41716173 - 102016976 AGCD01006688;AGCD01006689;GBDF01306643;XM_005375385;XM_013523068 XP_005375442;XP_013378522 MODEL 39133957 misc_rna 7SK 7SK RNA 8832071 trna Trnar-ucg transfer RNA arginine (anticodon UCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955483;NW_004955416;NW_004955553;NW_004955553 745122;769025;15772231;1885684;1885407 745194;769097;15772303;1885756;1885479 -;-;-;+;- 101978837 AGCD01017343;AGCD01057629;AGCD01057630;AGCD01072903 MODEL 8951949 protein-coding Il2rb interleukin 2 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-15-mediated signaling pathway (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); interleukin-15 receptor complex (ortholog) NW_004955413 23623567 23640245 - 102028734 AGCD01014333;GBDI01139428;XM_005379192 XP_005379249 MODEL 8957371 protein-coding Arfgap1 ARF GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi membrane (ortholog); postsynaptic density (ortholog); synapse (ortholog) NW_004955528 878837 893427 - 102016415 AGCD01069547;GBBH01164590;XM_005409986;XM_005409988;XM_013507465;XM_013507466;XM_013507467;XM_013507468;XM_013507469;XM_013507470;XM_013507471;XM_013507472;XM_013507473;XM_013507474 XP_005410043;XP_005410045;XP_013362919;XP_013362920;XP_013362921;XP_013362922;XP_013362923;XP_013362924;XP_013362925;XP_013362926;XP_013362927;XP_013362928 MODEL 39131398 protein-coding FITM2 fat storage inducing transmembrane protein 2 8917460 pseudo LOC102013409 tubulin beta-4B chain pseudogene NW_004955415 32953159 32960953 + 102013409 AGCD01016743;AGCD01016744 MODEL 8937609 protein-coding Cyfip2 cytoplasmic FMR1 interacting protein 2 INVOLVED IN apoptotic process (ortholog); cell-cell adhesion (ortholog); dendrite extension (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 11483891 11586628 + 102014747 AGCD01008311;AGCD01008312;GBBH01150816;XM_013508767;XM_013508777 XP_013364221;XP_013364231 MODEL 8764586 protein-coding Anxa3 annexin A3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); phospholipase A2 inhibitor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); defense response to bacterium (ortholog); hippocampus development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955433 2981113 3043894 + 102021162 AGCD01031408;AGCD01031409;AGCD01031410;AGCD01031411;GBCE01001166;GBCQ01036837;XM_013516133 XP_013371587 MODEL 8876912 trna Trnar-ucu transfer RNA arginine (anticodon UCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955423;NW_004955511;NW_004955465;NW_004955468;NW_004955467 841104;4044405;13275754;10939794;8841103 841188;4044489;13275843;10939867;8841189 -;+;+;-;- 101978839 AGCD01023421;AGCD01050596;AGCD01051475;AGCD01052109;AGCD01066488 MODEL 8833028 ncrna LOC102012206 uncharacterized LOC102012206 NW_004955421 24912739 24916609 - 102012206 AGCD01022223;XR_260826 MODEL 8778322 pseudo LOC102011831 nuclear receptor-binding factor 2 pseudogene NW_004957988 521 1128 + 102011831 AGCD01081384 MODEL 9049218 protein-coding Wdr73 WD repeat domain 73 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); nucleus organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Athetosis (ortholog); cervical cancer (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 14471479 14485416 + 102012643 AGCD01017270;AGCD01017271;GBCB01039745;XM_005381498 XP_005381555 MODEL 8982321 ncrna LOC102008271 uncharacterized LOC102008271 NW_004955445 2704964 2707871 - 102008271 AGCD01039363;GBCE01111187;XR_262299 MODEL 10200341 pseudo LOC102010988 Ig heavy chain V-I region 5-like NW_004955470 403274 403787 - 102010988 AGCD01052609 MODEL 39131884 rrna 5S_rRNA 5S ribosomal RNA 10154021 protein-coding Ahnak2 AHNAK nucleoprotein 2 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN costamere (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955538 3305664 3315094 - 106147279 AGCD01071157;AGCD01071158;GBCQ01094345;GBDJ01075788;XM_013507883 XP_013363337 MODEL 8818216 protein-coding Plppr2 phospholipid phosphatase related 2 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955495 2270323 2279688 + 102021683 AGCD01061760;GBBH01044136;XM_005405660;XM_005405661 XP_005405717;XP_005405718 MODEL 8718576 protein-coding Amer2 APC membrane recruitment protein 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH stomach cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955497 4640343 4645314 - 102014466 AGCD01062583;AGCD01062584;GBDF01074697;XM_013505515 XP_013360969 MODEL 9062469 protein-coding Cdadc1 cytidine and dCMP deaminase domain containing 1 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); dCTP deaminase activity (ortholog); importin-alpha family protein binding (ortholog); INVOLVED IN DNA cytosine deamination (ortholog); dUTP biosynthetic process (ortholog); protein homotrimerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955431 2724988 2767539 + 102020829 AGCD01029938;AGCD01029939;GBDK01156615;XM_005387576;XM_005387577;XM_005387578;XM_005387579;XM_005387580;XM_005387581;XM_013515745;XM_013515746 XP_005387633;XP_005387634;XP_005387635;XP_005387636;XP_005387637;XP_005387638;XP_013371199;XP_013371200 MODEL 8772217 ncrna LOC102007508 uncharacterized LOC102007508 NW_004955406 43082611 43102023 - 102007508 AGCD01006724;XR_001230800 MODEL 39134229 misc_rna 7SK 7SK RNA 8868008 protein-coding Clgn calmegin ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); protein-containing complex assembly (ortholog); single fertilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Dwarfism (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog) NW_004955428 3359231 3406221 + 102014382 AGCD01027655;AGCD01027656;AGCD01027657;GBDF01010788;XM_005386674;XM_005386675;XM_013515327;XM_013515328 XP_005386731;XP_005386732;XP_013370781;XP_013370782 MODEL 8986771 ncrna LOC102007121 uncharacterized LOC102007121 NW_004955482 3110012 3117667 + 102007121 AGCD01057259;GBDF01304912;XR_263825 MODEL 39132146 rrna 5S_rRNA 5S ribosomal RNA 8766279 pseudo LOC102008641 zinc finger protein OZF-like NW_004955425 1882091 1882998 - 102008641 AGCD01025249 MODEL 8822157 pseudo LOC102022482 transcription initiation factor TFIID subunit 11 pseudogene NW_004955465 7669723 7670348 - 102022482 AGCD01050465 MODEL 8777715 protein-coding Cfap43 cilia and flagella associated protein 43 INVOLVED IN brain development (ortholog); cell morphogenesis (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog) NW_004955485 6418063 6515730 + 102013833 AGCD01058619;AGCD01058620;AGCD01058621;GBBH01035016;GBDF01049424;XM_013504069 XP_013359523 MODEL 8931103 protein-coding Cdyl chromodomain Y like ENCODES a protein that exhibits (2E)-butenoyl-CoA hydratase activity (ortholog); chromatin binding (ortholog); identical protein binding (ortholog); INVOLVED IN random inactivation of X chromosome (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955465 8570197 8780551 - 102009811 AGCD01050476;AGCD01050477;AGCD01050478;AGCD01050479;GBBH01050758;XM_005398883;XM_013521859;XM_013521860 XP_005398940;XP_013377313;XP_013377314 MODEL 8763784 protein-coding Lrat lecithin retinol acyltransferase ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); O-palmitoyltransferase activity (ortholog); phosphatidylcholine-retinol O-acyltransferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); lipid storage (ortholog); positive regulation of lipid transport (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoic acid metabolic pathway; ASSOCIATED WITH celiac disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); multivesicular body (ortholog) NW_004955471 2603395 2610988 + 102015310 AGCD01053024;GBCQ01142329;GBDJ01353884;XM_005400870 XP_005400927 MODEL 8869137 protein-coding Slc39a1 solute carrier family 39 member 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); in utero embryonic development (ortholog); limb development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Prostatic Neoplasms (ortholog); respiratory allergy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955545 556210 559732 - 102024613 AGCD01071800;GBDK01075053;XM_005411458;XM_013508228 XP_005411515;XP_013363682 MODEL 9050268 protein-coding Bpifb2 BPI fold containing family B member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955422 28233236 28251627 - 102004722 AGCD01023345;GBBH01228047;XM_005384855;XM_013513871;XM_013513872;XM_013513873;XM_013513874 XP_005384912;XP_013369325;XP_013369326;XP_013369327;XP_013369328 MODEL 8715429 ncrna LOC102009800 uncharacterized LOC102009800 NW_004955407 17251314 17300456 + 102009800 AGCD01007243;AGCD01007244;AGCD01007245;AGCD01007246;GBDF01192314;XR_001231024 MODEL 8806943 protein-coding Fitm2 fat storage inducing transmembrane protein 2 ENCODES a protein that exhibits coenzyme A diphosphatase activity (ortholog); diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); fatty-acyl-CoA catabolic process (ortholog); intracellular triglyceride homeostasis (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); cholangiocarcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955445 13027431 13032089 + 102021400 AGCD01039767;GBDI01219068;XM_005392483 XP_005392540 MODEL 9051283 protein-coding Dnah10 dynein axonemal heavy chain 10 ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955482 5206653 5308437 - 102013609 AGCD01057323;AGCD01057324;AGCD01057325;GBDF01089181;XM_013503540;XM_013503541;XM_013503542;XM_013503543 XP_013358994;XP_013358995;XP_013358996;XP_013358997 MODEL 9005094 protein-coding Sgpp2 sphingosine-1-phosphate phosphatase 2 ENCODES a protein that exhibits dihydrosphingosine-1-phosphate phosphatase activity (ortholog); sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN regulation of type B pancreatic cell proliferation (ortholog); sphingosine metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955453 11244077 11361990 - 102024083 AGCD01044806;AGCD01044807;GBDJ01238332;XM_005395495;XM_005395497 XP_005395552;XP_005395554 MODEL 8985332 ncrna LOC102004595 uncharacterized LOC102004595 NW_004955415 837754 877703 - 102004595 AGCD01015854;AGCD01015855;GBBH01145410;XR_001233209 MODEL 9040653 protein-coding Adcyap1r1 ADCYAP receptor type I ENCODES a protein that exhibits adenylate cyclase binding (ortholog); pituitary adenylate cyclase-activating polypeptide receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cAMP metabolic process (ortholog); ASSOCIATED WITH asthma (ortholog); cystitis (ortholog); ovarian cancer (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell surface (ortholog) NW_004955410 32176683 32229187 + 102024318 AGCD01011335;AGCD01011336;GBBH01079724;GBCE01117049;XM_013510664;XM_013510665 XP_013366118;XP_013366119 MODEL 8938040 ncrna LOC102006020 uncharacterized LOC102006020 NW_004955414 22872844 22875573 - 102006020 AGCD01015483;GBCQ01017796;XR_260188 MODEL 8949910 protein-coding Acox3 acyl-CoA oxidase 3, pristanoyl ENCODES a protein that exhibits acyl-CoA oxidase activity (ortholog); fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN peroxisome (ortholog) NW_004955514 2653502 2690452 + 102007262 AGCD01067085;GBDF01017532;XM_005408770;XM_005408774;XM_013506788;XM_013506789;XM_013506790;XM_013506791;XM_013506792;XM_013506793;XR_001231764;XR_001231765 XP_005408827;XP_005408831;XP_013362242;XP_013362243;XP_013362244;XP_013362245;XP_013362246;XP_013362247 MODEL 8914173 ncrna LOC102014146 uncharacterized LOC102014146 NW_004955423 23506950 23576432 - 102014146 AGCD01024005;AGCD01024006;AGCD01024007;AGCD01024008;AGCD01024009;GBBH01072420;XR_001234109;XR_001234110;XR_001234111;XR_001234112;XR_001234113;XR_001234114;XR_260988 MODEL 8861500 protein-coding Rdh14 retinol dehydrogenase 14 ENCODES a protein that exhibits 11-cis-retinol dehydrogenase (NADP+) activity (ortholog); alcohol dehydrogenase (NADP+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN retinol metabolic process (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) NW_004955469 1281391 1287334 - 102009593 AGCD01052251;GBCQ01066491;XM_005400336 XP_005400393 MODEL 8748199 protein-coding LOC102009035 uncharacterized LOC102009035 NW_004955413 33713020 33714649 + 102009035 AGCD01014688;GBDI01173861;XM_013511547;XM_013511548 XP_013367001;XP_013367002 MODEL 8957773 protein-coding Prm3 protamine 3 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN cytoplasm (ortholog) NW_004955442 7308621 7309105 + 102030572 AGCD01037623;GBDF01008604;XM_005391167 XP_005391224 MODEL 8894367 protein-coding LOC102004225 PRAME family member 3-like NW_004955615 103500 106083 - 102004225 AGCD01077249;XM_005414980 XP_005415037 MODEL 9065194 ncrna LOC102018396 uncharacterized LOC102018396 NW_004955417 27113467 27122607 + 102018396 AGCD01018533;GBCE01184006;XR_260504 MODEL 8831302 pseudo LOC102008273 cytochrome c, somatic pseudogene NW_004955446 3719779 3720140 - 102008273 AGCD01040028 MODEL 8838681 protein-coding Erf ETS2 repressor factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chorio-allantoic fusion (ortholog); ectodermal cell differentiation (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Anorectal Malformations (ortholog); Arnold-Chiari Malformation (ortholog); autistic disorder (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955555 654945 661097 + 102027684 AGCD01073042;GBBH01090836;GBCE01095401;XM_005412381;XM_005412382;XM_013508752 XP_005412438;XP_005412439;XP_013364206 MODEL 8715752 protein-coding Rspo2 R-spondin 2 ENCODES a protein that exhibits heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN bone mineralization (ortholog); dopaminergic neuron differentiation (ortholog); embryonic forelimb morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); Humerofemoral Hypoplasia with Radiotibial Ray Deficiency (ortholog); lung cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955417 30643554 30704497 - 102023033 AGCD01018628;GBDK01061470;XM_005382000 XP_005382057 MODEL 8859452 pseudo LOC102013413 peptidyl-prolyl cis-trans isomerase-like 4 pseudogene NW_004955417 10686148 10688391 + 102013413 AGCD01018086 MODEL 9031269 protein-coding Abcb1 ATP binding cassette subfamily B member 1 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN adult heart development (ortholog); aldosterone secretion (ortholog); carboxylic acid transmembrane transport (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute lymphoblastic leukemia (ortholog); adrenocortical carcinoma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955432 4911774 5085349 - 102016627 AGCD01030750;AGCD01030751;AGCD01030752;AGCD01030753;AGCD01030754;AGCD01030755;AGCD01030756;AGCD01030757;GBDJ01181374;XM_005387974 XP_005388031 MODEL 8758141 pseudo LOC102010222 small nuclear ribonucleoprotein Sm D1 pseudogene NW_004955405 4117051 4117475 - 102010222 AGCD01004644;XM_005374670 MODEL 8878298 protein-coding Cygb cytoglobin ENCODES a protein that exhibits carbon monoxide binding (ortholog); catalase activity (ortholog); fatty acid peroxidase activity (ortholog); INVOLVED IN fatty acid oxidation (ortholog); negative regulation of collagen biosynthetic process (ortholog); negative regulation of fibroblast migration (ortholog); ASSOCIATED WITH chronic pancreatitis (ortholog); Experimental Liver Cirrhosis (ortholog); extrahepatic cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuron projection (ortholog) NW_004955506 5766006 5775722 + 102023381 AGCD01065387;GBBH01228785;XM_005407427;XM_013506123;XM_013506124 XP_005407484;XP_013361577;XP_013361578 MODEL 10101754 protein-coding C2cd4d C2 calcium dependent domain containing 4D NW_004955589 582261 583519 + 106147595 AGCD01076176;GBDI01079516;XM_013509939 XP_013365393 MODEL 8964919 ncrna LOC102013774 uncharacterized LOC102013774 NW_004955447 17694436 17697503 - 102013774 AGCD01041133;GBCB01129695;XR_001235726 MODEL 8762004 ncrna LOC102004962 uncharacterized LOC102004962 NW_004955432 17596653 17600631 - 102004962 AGCD01031128;GBDF01122165;XR_261532 MODEL 39133958 misc_rna 7SK 7SK RNA 39134090 misc_rna 7SK 7SK RNA 9054629 protein-coding Sort1 sortilin 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); enzyme binding (ortholog); nerve growth factor binding (ortholog); INVOLVED IN endocytosis (ortholog); endosome to lysosome transport (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog); FOUND IN cell surface (ortholog); cerebellar climbing fiber to Purkinje cell synapse (ortholog); clathrin-coated pit (ortholog) NW_004955435 12725952 12819280 - 102026666 AGCD01033163;AGCD01033164;AGCD01033165;AGCD01033166;AGCD01033167;GBBH01142331;GBCQ01063656;XM_013516443;XM_013516444 XP_013371897;XP_013371898 MODEL 8852424 protein-coding Dnah11 dynein axonemal heavy chain 11 INVOLVED IN cardiac septum morphogenesis (ortholog); cilium movement (ortholog); determination of left/right asymmetry in nervous system (ortholog); ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axoneme (ortholog) NW_004955410 24045333 24352626 + 102006882 AGCD01011122;AGCD01011123;AGCD01011124;AGCD01011125;AGCD01011126;GBBH01091428;GBBH01091430;XM_005377377;XM_005377378 XP_005377434;XP_005377435 MODEL 8720634 protein-coding Avpr2 arginine vasopressin receptor 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of urine volume (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH cardiomyopathy (ortholog); congenital adrenal hyperplasia (ortholog); congestive heart failure (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955580 583827 586739 + 102021498 AGCD01075613;GBCQ01038848;XM_005414164;XM_005414165;XM_005414166;XM_005414167;XM_013509695;XM_013509696;XM_013509697;XM_013509698;XM_013509699;XM_013509700 XP_005414221;XP_005414222;XP_005414223;XP_005414224;XP_013365149;XP_013365150;XP_013365151;XP_013365152;XP_013365153;XP_013365154 MODEL 8837596 pseudo LOC102018399 heterogeneous nuclear ribonucleoprotein A1-like NW_004955484 1981678 1990275 + 102018399 AGCD01058075;AGCD01058076 MODEL 8734054 ncrna LOC102003168 uncharacterized LOC102003168 NW_004955513 4074732 4078682 + 102003168 AGCD01066914;GBDF01146373;XR_264473 MODEL 9066919 protein-coding LOC102007509 uncharacterized LOC102007509 NW_004955406 41604564 41614798 + 102007509 AGCD01006688;GBDI01238964;XM_013523033;XR_001237101;XR_001237102;XR_001237104;XR_001237106;XR_001237107 XP_013378487 MODEL 8968218 ncrna LOC102012211 uncharacterized LOC102012211 NW_004955422 23635752 23644682 - 102012211 AGCD01023199;GBCQ01013438;XR_260906 MODEL 15036853 trna Trnas-acu transfer RNA serine (anticodon ACU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978841 8866852 protein-coding Arfgap2 ARF GTPase activating protein 2 ENCODES a protein that exhibits channel activator activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN COPI coating of Golgi vesicle (ortholog); positive regulation of cytokine production (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955422 995672 1006008 + 102029755 AGCD01022444;GBDF01047823;XM_005384002;XM_005384003 XP_005384059;XP_005384060 MODEL 8837302 protein-coding Atg9b autophagy related 9B INVOLVED IN autophagosome assembly (ortholog); autophagosome organization (ortholog); autophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); phagophore assembly site membrane (ortholog) NW_004955491 5458152 5467260 - 102029869 AGCD01060483;AGCD01060484;GBBH01038067;GBDJ01029728;XM_013504581 XP_013360035 MODEL 8778548 protein-coding Cfap44 cilia and flagella associated protein 44 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH spermatogenic failure 20 (ortholog) NW_004955427 13497275 13583605 - 102020689 AGCD01027252;AGCD01027253;GBDI01139893;XM_013515054 XP_013370508 MODEL 9029836 protein-coding LOC102009805 translation initiation factor IF-2-like NW_004955408 1538854 1542633 - 102009805 AGCD01007963;AGCD01007964;GBCE01168250;XM_013507120 XP_013362574 MODEL 8752326 protein-coding Lratd1 LRAT domain containing 1 INVOLVED IN cell morphogenesis (ortholog); cell motility (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955487 8452413 8454585 + 102010168 AGCD01059434;GBDF01089408;XM_005404438;XM_005404439 XP_005404495;XP_005404496 MODEL 39131886 rrna 5S_rRNA 5S ribosomal RNA 8732003 protein-coding Bpifb3 BPI fold containing family B member 3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 28192359 28208946 - 102003885 AGCD01023345;GBBH01229204;XM_005384853 XP_005384910 MODEL 8714779 protein-coding Ccdc116 coiled-coil domain containing 116 ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955442 17474743 17482389 - 102016317 AGCD01037955;GBDF01021116;XM_005391705;XM_005391707;XM_005391708;XM_013518019 XP_005391762;XP_005391764;XP_005391765;XP_013373473 MODEL 8773963 protein-coding LOC102010989 putative olfactory receptor 52P1 NW_004955414 21657267 21659390 + 102010989 AGCD01015425;GBDJ01377827;XM_005380103 XP_005380160 MODEL 8716588 protein-coding LOC102009036 60S ribosomal protein L5 NW_004955469 9922760 9923788 - 102009036 AGCD01052521;XM_005400516 XP_005400573 MODEL 8730233 ncrna LOC102014148 uncharacterized LOC102014148 NW_004955423 28261530 28278611 + 102014148 AGCD01024146;XR_261015 MODEL 39134231 misc_rna 7SK 7SK RNA 9066802 protein-coding Il2rg interleukin 2 receptor subunit gamma ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular homeostasis (ortholog); interleukin-15-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH bronchiolitis (ortholog); combined immunodeficiency (ortholog); combined T cell and B cell immunodeficiency (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); interleukin-15 receptor complex (ortholog) NW_004955475 10676592 10680565 - 102028412 AGCD01055108;AGCD01055109;GBBH01142524;GBDI01064080;XM_013502895 XP_013358349 MODEL 9043330 protein-coding Plppr3 phospholipid phosphatase related 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); sarcoma (ortholog) NW_004955495 6980213 6990331 + 102020352 AGCD01062108;AGCD01062109;GBDI01386422;XM_013505337 XP_013360791 MODEL 8832887 protein-coding LOC102007123 olfactory receptor 15-like NW_004955418 29652822 29653751 - 102007123 AGCD01019476;XM_005382358 XP_005382415 MODEL 39132150 rrna 5S_rRNA 5S ribosomal RNA 8993438 pseudo LOC102008645 glycolipid transfer protein pseudogene NW_004955501 6968136 6973149 + 102008645 AGCD01064202;XM_005406840 MODEL 8900090 protein-coding Anxa4 annexin A4 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of interleukin-8 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) NW_004955424 15323604 15389136 - 102014261 AGCD01024706;AGCD01024707;AGCD01024708;AGCD01024709;AGCD01024710;GBDF01015085;XM_005385639 XP_005385696 MODEL 9032342 protein-coding Clhc1 clathrin heavy chain linker domain containing 1 ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN membrane (ortholog) NW_004955424 27825865 27923223 + 102010177 AGCD01025131;AGCD01025132;AGCD01025133;AGCD01025134;AGCD01025135;AGCD01025136;AGCD01025137;AGCD01025138;AGCD01025139;AGCD01025140;AGCD01025141;AGCD01025142;GBBH01106727;GBDF01086525;XM_005385783 XP_005385840 MODEL 8724161 protein-coding LOC102022485 intelectin-1a-like NW_004955468 12676510 12685740 - 102022485 AGCD01052176;GBCQ01163630;XM_005400223;XM_005400224;XM_013522494 XP_005400280;XP_005400281;XP_013377948 MODEL 8927299 protein-coding Rspo3 R-spondin 3 ENCODES a protein that exhibits frizzled binding (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955436 8151122 8235183 + 102007271 AGCD01033727;AGCD01033728;AGCD01033729;AGCD01033730;AGCD01033731;GBCE01131532;GBDJ01092589;XM_005389165 XP_005389222 MODEL 8791839 protein-coding LOC102011839 keratin-associated protein 7-1 NW_004955407 30545079 30553536 - 102011839 AGCD01007636;GBDF01259648;XM_005375655 XP_005375712 MODEL 8786653 protein-coding Fiz1 FLT3 interacting zinc finger 1 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955567 746216 751032 + 102023083 AGCD01074430;AGCD01074431;GBDI01242402;XM_013509225 XP_013364679 MODEL 8803570 pseudo LOC102010227 coenzyme Q-binding protein COQ10 homolog B, mitochondrial pseudogene NW_004955406 14637868 14638870 + 102010227 AGCD01005967 MODEL 9031716 pseudo LOC102006021 calcyclin-binding protein pseudogene NW_004955470 12066013 12067427 + 102006021 AGCD01052919 MODEL 8845347 protein-coding Add1 adducin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal adaptor activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955514 1784302 1812845 + 102027219 AGCD01067064;GBDI01001021;XM_005408743;XM_005408744;XM_005408745;XM_005408746;XM_005408749 XP_005408800;XP_005408801;XP_005408802;XP_005408803;XP_005408806 MODEL 8728260 protein-coding Cfap45 cilia and flagella associated protein 45 ENCODES a protein that exhibits AMP binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); epithelial cilium movement involved in determination of left/right asymmetry (ortholog); establishment of left/right asymmetry (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal B tubule inner sheath (ortholog) NW_004955468 11672332 11711395 - 102010246 AGCD01052136;AGCD01052137;GBBH01163486;XM_005400181;XM_005400183;XM_013522501 XP_005400238;XP_005400240;XP_013377955 MODEL 8779019 protein-coding LOC102004229 leukocyte immunoglobulin-like receptor subfamily A member 6 NW_004957048 669 1949 - 102004229 AGCD01080444;GBCE01054558;GBDJ01017271;XM_013510242 XP_013365696 MODEL 8975756 protein-coding Cdan1 codanin 1 INVOLVED IN cell maturation (ortholog); cell morphogenesis (ortholog); chromatin organization (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endomembrane system (ortholog) NW_004955416 9393170 9403374 - 102024796 AGCD01017086;GBBH01143926;GBCE01116782;XM_013512437;XM_013512438;XM_013512439;XM_013512440;XM_013512441 XP_013367891;XP_013367892;XP_013367893;XP_013367894;XP_013367895 MODEL 8917558 protein-coding Erfe erythroferrone ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of autophagy (ortholog); FOUND IN extracellular region (ortholog) NW_004955542 2408504 2415522 - 102016097 AGCD01071522;GBDF01279710;XM_013508015;XM_013508016 XP_013363469;XP_013363470 MODEL 8845424 protein-coding Cdyl2 chromodomain Y like 2 ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); histone H3K9me2/3 reader activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955522 3403542 3458029 - 102028008 AGCD01068381;GBCQ01154556;XM_005409346 XP_005409403 MODEL 8718050 protein-coding Awat1 acyl-CoA wax alcohol acyltransferase 1 ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); pancreatic adenocarcinoma (ortholog) NW_004955475 9780080 9785675 + 102021337 AGCD01055075;GBCE01147851;XM_005401614 XP_005401671 MODEL 8933714 protein-coding Slc39a10 solute carrier family 39 member 10 ENCODES a protein that exhibits protein tyrosine phosphatase activator activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); intracellular zinc ion homeostasis (ortholog); negative regulation of B cell apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955403 4426538 4479693 - 102021070 AGCD01001786;AGCD01001787;GBCB01119952;XM_005373283;XM_005373284 XP_005373340;XP_005373341 MODEL 9035162 protein-coding Wdr74 WD repeat domain 74 INVOLVED IN blastocyst formation (ortholog); ribosomal large subunit biogenesis (ortholog); RNA metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955599 408076 413770 + 102005655 AGCD01076646;GBCE01053828;XM_005414759;XM_005414760 XP_005414816;XP_005414817 MODEL 8931798 trna Trnas-aga transfer RNA serine (anticodon AGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978802 AGCD01018131;AGCD01050593;AGCD01050595;AGCD01050596;AGCD01051466;AGCD01057629 MODEL 8961290 protein-coding LOC102013416 butyrophilin subfamily 2 member A2 NW_004955483 413795 498359 - 102013416 AGCD01057609;AGCD01057610;AGCD01057611;AGCD01057612;AGCD01057613;AGCD01057614;AGCD01057615;AGCD01057616;AGCD01057617;AGCD01057618;AGCD01057619;GBDJ01002979;XM_005403285;XM_013503774;XM_013503775;XM_013503776;XM_013503777;XM_013503779;XM_013503780;XM_013503781 XP_005403342;XP_013359228;XP_013359229;XP_013359230;XP_013359231;XP_013359233;XP_013359234;XP_013359235 MODEL 8723613 protein-coding C2cd5 C2 calcium dependent domain containing 5 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); intracellular protein transmembrane transport (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955413 17883411 17972865 - 102022582 AGCD01014165;AGCD01014166;GBDJ01129965;GBDJ01129976;XM_005379074 XP_005379131 MODEL 8983988 protein-coding Arfgap3 ARF GTPase activating protein 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN COPI coating of Golgi vesicle (ortholog); presynaptic endocytosis (ortholog); protein secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955413 28058252 28108656 - 102014037 AGCD01014549;AGCD01014550;AGCD01014551;AGCD01014552;GBCE01076485;XM_005379428 XP_005379485 MODEL 8805816 ncrna LOC102013777 uncharacterized LOC102013777 NW_004955448 18100507 18140731 - 102013777 AGCD01041736;AGCD01041737;AGCD01041738;AGCD01041739;AGCD01041740;GBDF01054183;XR_001235765 MODEL 39131744 rrna 5S_rRNA 5S ribosomal RNA 8720110 protein-coding Rdh5 retinol dehydrogenase 5 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity (ortholog); androsterone dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); steroid metabolic process (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; ASSOCIATED WITH Congenital Abnormalities (ortholog); fundus albipunctatus (ortholog); myopia (ortholog); FOUND IN cell body (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955458 3356324 3361701 + 102020090 AGCD01047296;GBDI01078451;XM_005397255;XM_005397256;XM_005397257 XP_005397312;XP_005397313;XP_005397314 MODEL 8901152 trna Trnas-cga transfer RNA serine (anticodon CGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955501;NW_004955465;NW_004955465;NW_004955467 1580746;13301831;13138748;8814367 1580827;13301912;13138829;8814448 +;-;+;+ 101978805 AGCD01050590;AGCD01050597;AGCD01051472;AGCD01064055 MODEL 9043676 pseudo LOC102004965 desumoylating isopeptidase 2-like NW_004955521 50420 60020 - 102004965 AGCD01068127;AGCD01068128 MODEL 39134091 misc_rna 7SK 7SK RNA 9029493 pseudo LOC102014150 ribosome biogenesis protein NSA2 homolog pseudogene NW_004955424 8502072 8502854 - 102014150 AGCD01024472 MODEL 8739851 protein-coding Il31 interleukin 31 ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); oncostatin-M receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955482 6387289 6389361 + 102029864 AGCD01057390;GBDF01063375;XM_005403253 XP_005403310 MODEL 8974197 protein-coding LOC102018404 death domain-containing membrane protein NRADD-like NW_004955420 25181345 25184190 - 102018404 AGCD01021346;GBBH01164455;XM_013513387;XM_013513388 XP_013368841;XP_013368842 MODEL 8808493 protein-coding Plppr4 phospholipid phosphatase related 4 ENCODES a protein that exhibits lipid phosphatase activity (ortholog); lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN axonogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); inner ear development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN external side of plasma membrane (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955435 4085918 4112207 + 102021275 AGCD01032819;GBDF01303712;XM_005389095 XP_005389152 MODEL 8890332 protein-coding LOC102007511 immunoglobulin omega chain-like NW_004955455 6477568 6478007 + 102007511 AGCD01045797;GBDI01376516;XM_013520310 XP_013375764 MODEL 8728223 protein-coding LOC102008649 olfactory receptor 5M11-like NW_004955511 1679591 1680559 - 102008649 AGCD01066377;XM_005407971 XP_005408028 MODEL 8729168 protein-coding Sgsh N-sulfoglucosamine sulfohydrolase ENCODES a protein that exhibits N-sulfoglucosamine sulfohydrolase activity (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); glycosaminoglycan catabolic process (ortholog); heparan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); carbohydrate metabolic disorder (ortholog); FOUND IN lysosomal lumen (ortholog); lysosome (ortholog) NW_004955506 2701901 2713431 + 102019718 AGCD01065301;GBDJ01225391;XM_005407325;XM_005407326;XM_013505991;XM_013505992;XM_013505993;XR_264337;XR_264338 XP_005407382;XP_005407383;XP_013361445;XP_013361446;XP_013361447 MODEL 8856531 protein-coding Acoxl acyl-CoA oxidase like ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955470 2788249 3077277 - 102025234 AGCD01052682;AGCD01052683;AGCD01052684;AGCD01052685;AGCD01052686;AGCD01052687;AGCD01052688;AGCD01052689;GBDK01050330;XM_013522692 XP_013378146 MODEL 8999191 protein-coding Abcb10 ATP binding cassette subfamily B member 10 ENCODES a protein that exhibits ABC-type transporter activity (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN erythrocyte development (ortholog); export from the mitochondrion (ortholog); heme biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ATP-binding cassette (ABC) transporter complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955492 8532240 8573211 + 102025917 AGCD01060817;AGCD01060818;AGCD01060819;AGCD01060820;GBBH01076456;XM_005405023 XP_005405080 MODEL 9024781 protein-coding Prmt1 protein arginine methyltransferase 1 ENCODES a protein that exhibits arginine N-methyltransferase activity (ortholog); enzyme binding (ortholog); GATOR1 complex binding (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); cellular response to methionine (ortholog); DNA damage response (ortholog); PARTICIPATES IN androgen signaling pathway; estrogen signaling pathway; histone modification pathway; ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); cleft palate (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) NW_004955559 1205340 1215672 - 102009115 AGCD01073634;AGCD01073635;AGCD01073636;GBBH01032002;XM_005412853;XM_005412854;XM_005412855;XM_005412856;XM_013508977;XM_013508978 XP_005412910;XP_005412911;XP_005412912;XP_005412913;XP_013364431;XP_013364432 MODEL 8874220 protein-coding Erfl ETS repressor factor like NW_004955555 929984 941311 + 102008465 AGCD01073053;AGCD01073054;GBCE01120286;XM_005412413;XM_013508718 XP_005412470;XP_013364172 MODEL 9034033 protein-coding Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ENCODES a protein that exhibits IMP cyclohydrolase activity (ortholog); phosphoribosylaminoimidazolecarboxamide formyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH AICAR Transformylase Inosine Monophosphate Cyclohydrolase Deficiency (ortholog); blindness (ortholog); Breast Cancer, Familial (ortholog) NW_004955457 704213 729702 - 102020089 AGCD01046712;AGCD01046713;GBBH01163375;GBDJ01175754;XM_005396914 XP_005396971 MODEL 8726721 ncrna LOC102011840 uncharacterized LOC102011840 NW_004955407 35818286 35827944 - 102011840 AGCD01007751;GBCQ01178585;XR_001231235;XR_001231237;XR_001231238;XR_259614 MODEL 8832916 protein-coding Fjx1 four-jointed box kinase 1 INVOLVED IN retina layer formation (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 10731004 10733522 - 102010064 AGCD01022743;AGCD01022744;GBBH01208613;XM_005384948 XP_005385005 MODEL 9012073 protein-coding Ahr aryl hydrocarbon receptor ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); aryl hydrocarbon receptor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); blood circulation (ortholog); blood vessel development (ortholog); PARTICIPATES IN aryl hydrocarbon receptor signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); Adult Pancreatic Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear aryl hydrocarbon receptor complex (ortholog) NW_004955410 20428531 20459482 + 102021949 AGCD01011045;GBBH01163343;XM_013510570 XP_013366024 MODEL 8989607 protein-coding Ccdc117 coiled-coil domain containing 117 INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of DNA repair (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN mitotic spindle (ortholog); nucleus (ortholog) NW_004955455 3019373 3034891 + 102023001 AGCD01045608;AGCD01045609;GBDF01153507;XM_005396167;XM_005396168;XM_013520380 XP_005396224;XP_005396225;XP_013375834 MODEL 8718303 protein-coding Lratd2 LRAT domain containing 2 ASSOCIATED WITH melanoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955461 1623114 1627515 - 102003740 AGCD01048818;GBBH01142184;XM_013521345 XP_013376799 MODEL 9007093 protein-coding Dnah12 dynein axonemal heavy chain 12 INVOLVED IN sperm axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955430 7039070 7272927 - 102014930 AGCD01029332;AGCD01029333;AGCD01029334;AGCD01029335;AGCD01029336;AGCD01029337;AGCD01029338;AGCD01029339;AGCD01029340;AGCD01029341;AGCD01029342;GBDI01175777;GBDK01394051;NM_001370885;XM_005387410;XM_013515596;XM_013515597;XM_013515598 NP_001357814;XP_005387467;XP_013371050;XP_013371051;XP_013371052 VALIDATED 8958015 protein-coding Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); B cell receptor signaling pathway (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnodactyly (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); GTPase complex (ortholog) NW_004955441 6649895 6724271 - 102013878 AGCD01036937;AGCD01036938;GBCB01041404;XM_005391044 XP_005391101 MODEL 39134232 misc_rna 7SK 7SK RNA 8898200 protein-coding Cfap46 cilia and flagella associated protein 46 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955477 10412774 10517415 - 102014135 AGCD01055695;AGCD01055696;AGCD01055697;AGCD01055698;AGCD01055699;AGCD01055700;AGCD01055701;GBCE01169122;XM_013503028;XM_013503030;XM_013503031;XM_013503032;XR_001230822 XP_013358482;XP_013358484;XP_013358485;XP_013358486 MODEL 9019224 pseudo LOC102003174 transcription factor E2F6 pseudogene NW_004955437 13053465 13055563 + 102003174 AGCD01034639 MODEL 8997905 protein-coding Cdc123 cell division cycle 123 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN eukaryotic translation initiation factor 2 complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955462 212090 270168 + 102006103 AGCD01049072;AGCD01049073;AGCD01049074;AGCD01049075;GBDF01085876;XM_005398078;XM_005398079 XP_005398135;XP_005398136 MODEL 39132153 rrna 5S_rRNA 5S ribosomal RNA 8828709 ncrna LOC102004597 uncharacterized LOC102004597 NW_004955415 12081312 12097999 + 102004597 AGCD01016184;GBCE01084010;XR_001233219;XR_001233220 MODEL 8981767 protein-coding LOC102014151 uncharacterized LOC102014151 NW_004955497 4505827 4537655 + 102014151 AGCD01062577;AGCD01062578;AGCD01062579;GBDF01128812;XM_013505451 XP_013360905 MODEL 8861182 protein-coding LOC102022486 taste receptor type 2 member 8-like NW_004955413 7969812 7970744 - 102022486 AGCD01013841;XM_005379624 XP_005379681 MODEL 9059253 protein-coding Rspo4 R-spondin 4 INVOLVED IN nail development (ortholog); positive regulation of Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955596 265282 295283 - 102009786 AGCD01076512;AGCD01076513;AGCD01076514;GBCE01111001;XM_005414687 XP_005414744 MODEL 8702408 protein-coding Amer3 APC membrane recruitment protein 3 ASSOCIATED WITH cervical cancer (ortholog); Pyelectasis (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nuclear body (ortholog) NW_004955459 267754 277422 + 102014424 AGCD01047931;GBDF01117001;XM_005397547;XM_013521051;XR_263003;XR_263004 XP_005397604;XP_013376505 MODEL 8748204 protein-coding LOC102009806 inner nuclear membrane protein Man1 NW_004955458 11884435 11954683 + 102009806 AGCD01047763;AGCD01047764;GBBH01024965;GBCE01008629;XM_013520993 XP_013376447 MODEL 8941727 protein-coding Slc39a11 solute carrier family 39 member 11 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN zinc ion import across plasma membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) NW_004955478 123873 489704 + 102018284 AGCD01055732;AGCD01055733;AGCD01055734;AGCD01055735;AGCD01055736;AGCD01055737;AGCD01055738;GBDF01053360;XM_005402092;XM_005402093;XM_005402094;XM_005402095;XM_013503238;XM_013503239 XP_005402149;XP_005402150;XP_005402151;XP_005402152;XP_013358692;XP_013358693 MODEL 39133959 misc_rna 7SK 7SK RNA 8981568 protein-coding Acp1 acid phosphatase 1 ENCODES a protein that exhibits acid phosphatase activity (ortholog); phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; riboflavin metabolic pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); conduct disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955487 290434 302405 + 102004285 AGCD01059216;GBDF01083460;XM_005404332;XM_005404333;XM_013504379 XP_005404389;XP_005404390;XP_013359833 MODEL 8888047 ncrna LOC102010990 uncharacterized LOC102010990 NW_004955471 9880793 9917131 + 102010990 AGCD01053222;GBDF01194926;XR_263532 MODEL 39131495 protein-coding C2orf69 chromosome 2 open reading frame 69 8881134 pseudo LOC102007124 allograft inflammatory factor 1 pseudogene NW_004955419 15234825 15235399 - 102007124 AGCD01020068;XR_260632 MODEL 8915234 trna Trnas-gcu transfer RNA serine (anticodon GCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978842 AGCD01012398;AGCD01016984;AGCD01022970;AGCD01050591;AGCD01050613;AGCD01050626;AGCD01051471;AGCD01057630;AGCD01063790 MODEL 8709757 protein-coding Arfgef1 ARF guanine nucleotide exchange factor 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); myosin binding (ortholog); INVOLVED IN endomembrane system organization (ortholog); glycoprotein biosynthetic process (ortholog); Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); apraxia (ortholog); astigmatism (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955444 11986595 12110172 + 102008357 AGCD01039059;AGCD01039060;GBCQ01064317;GBDF01053271;XM_005392122 XP_005392179 MODEL 8753880 protein-coding Add2 adducin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cytoskeletal adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hereditary spherocytosis type 1 (ortholog); IgA glomerulonephritis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); F-actin capping protein complex (ortholog); glutamatergic synapse (ortholog) NW_004955424 14411279 14517813 + 102004179 AGCD01024654;GBDI01196110;XM_005385610;XM_005385611;XM_013514748 XP_005385667;XP_005385668;XP_013370202 MODEL 8754591 protein-coding Rdh8 retinol dehydrogenase 8 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN retinol metabolic process (ortholog); visual perception (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955495 1388385 1393209 + 102027317 AGCD01061685;GBDJ01396679;XM_005405579 XP_005405636 MODEL 39134092 misc_rna 7SK 7SK RNA 8792615 protein-coding Cylc1 cylicin 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); maintenance of cell number (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal membrane (ortholog); acrosomal vesicle (ortholog) NW_004955529 2996909 3052053 + 102020952 AGCD01069777;AGCD01069778;AGCD01069779;AGCD01069780;AGCD01069781;AGCD01069782;GBDF01089424;XM_005410077;XM_005410078 XP_005410134;XP_005410135 MODEL 9022218 protein-coding Anxa5 annexin A5 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); P-type calcium transporter activity (ortholog); INVOLVED IN cellular response to gonadotropin-releasing hormone (ortholog); cellular response to lead ion (ortholog); negative regulation of blood coagulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN axon terminus (ortholog); cell projection (ortholog); dendrite (ortholog) NW_004955428 18873782 18907955 + 102019417 AGCD01028073;AGCD01028074;GBCC01000191;GBCE01120920;XM_005386786 XP_005386843 MODEL 8965128 protein-coding Dnah14 dynein axonemal heavy chain 14 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog) NW_004955520 418041 735810 - 102005744 AGCD01068016;AGCD01068017;AGCD01068018;AGCD01068019;AGCD01068020;AGCD01068021;AGCD01068022;AGCD01068023;AGCD01068024;AGCD01068025;AGCD01068026;AGCD01068027;AGCD01068028;AGCD01068029;AGCD01068030;AGCD01068031;GBDF01049700;XM_013507033;XM_013507034;XM_013507035;XM_013507036;XM_013507037;XM_013507038;XM_013507039;XM_013507040;XM_013507041;XM_013507042;XM_013507043;XM_013507044;XM_013507045;XM_013507046;XM_013507047;XM_013507048 XP_013362487;XP_013362488;XP_013362489;XP_013362490;XP_013362491;XP_013362492;XP_013362493;XP_013362494;XP_013362495;XP_013362496;XP_013362497;XP_013362498;XP_013362499;XP_013362500;XP_013362501;XP_013362502 MODEL 8791544 protein-coding Clic1 CLIC family member 1 ENCODES a protein that exhibits chloride channel activity (ortholog); glutathione dehydrogenase (ascorbate) activity (ortholog); INVOLVED IN chloride transport (ortholog); platelet aggregation (ortholog); positive regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955437 269276 275949 - 102028231 AGCD01034115;GBBH01003865;XM_005389385 XP_005389442 MODEL 8945799 protein-coding LOC102018405 uncharacterized protein C2orf78-like NW_004955486 1403402 1408342 - 102018405 AGCD01058952;AGCD01058953;XM_013504140 XP_013359594 MODEL 8891262 protein-coding LOC102008274 cytochrome P450 3A17-like NW_004955573 1579916 1582530 - 102008274 AGCD01075071;AGCD01075072;GBDI01160800;GBDK01284967;XM_013509483 XP_013364937 MODEL 9010891 protein-coding Wdr75 WD repeat domain 75 INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955403 9352615 9383206 - 102008367 AGCD01001905;GBDJ01219698;XM_005373322 XP_005373379 MODEL 8879513 protein-coding LOC102010229 keratin-associated protein 20-2-like NW_004955407 30229986 30230156 + 102010229 AGCD01007628;XM_005375650 XP_005375707 MODEL 8802628 protein-coding Bpifb4 BPI fold containing family B member 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955422 28166892 28190403 - 102004398 AGCD01023344;AGCD01023345;GBBH01019084;XM_013513875;XM_013513876 XP_013369329;XP_013369330 MODEL 8959850 protein-coding LOC102009041 natural cytotoxicity triggering receptor 3 ligand 1-like NW_004955414 32155049 32171552 + 102009041 AGCD01015774;AGCD01015775;AGCD01015776;GBDF01277682;XM_005380380;XM_005380381;XM_013512029 XP_005380437;XP_005380438;XP_013367483 MODEL 8893524 protein-coding LOC102006024 ovomucoid-like NW_004955415 5904647 5909835 - 102006024 AGCD01016002;GBDF01085593;XM_005380639 XP_005380696 MODEL 9009075 protein-coding Prmt2 protein arginine methyltransferase 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955407 42991305 43019332 + 102021733 AGCD01007902;GBDF01089964;XM_013505814 XP_013361268 MODEL 8935311 ncrna LOC102013779 uncharacterized LOC102013779 NW_004955450 1093815 1102231 - 102013779 AGCD01042350;GBBH01079757;XR_262514 MODEL 9003764 protein-coding LOC102004231 alpha-L-fucosidase-like NW_004955403 19942836 19945318 + 102004231 AGCD01002152;XM_013514776 XP_013370230 MODEL 8981912 protein-coding Erg ETS transcription factor ERG ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 37372471 37613674 - 102019363 AGCD01007780;AGCD01007781;AGCD01007782;AGCD01007783;AGCD01007784;AGCD01007785;GBDK01013561;XM_005375759;XM_005375760;XM_005375761;XM_013504784 XP_005375816;XP_005375817;XP_005375818;XP_013360238 MODEL 39133960 misc_rna 7SK 7SK RNA 8922629 protein-coding Ccdc12 coiled-coil domain containing 12 INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN catalytic step 1 spliceosome (ortholog); nucleoplasm (ortholog) NW_004955420 25212888 25257733 + 102019176 AGCD01021347;GBCE01002638;XM_013513389 XP_013368843 MODEL 8741404 protein-coding LOC102004966 ubiquitin-conjugating enzyme E2 variant 2 NW_004955434 3903987 3905023 - 102004966 AGCD01032148;XM_005388563 XP_005388620 MODEL 8953690 protein-coding LOC102012212 putative DBH-like monooxygenase protein 2 NW_004955494 1292620 1301008 + 102012212 AGCD01061393;GBDF01104482;XM_005405397 XP_005405454 MODEL 8712920 protein-coding Awat2 acyl-CoA wax alcohol acyltransferase 2 ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); retinol O-fatty-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); wax biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); dry eye syndrome (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955475 9594157 9634596 - 102019267 AGCD01055068;GBCC01013125;XM_005401606;XM_005401607;XM_005401608 XP_005401663;XP_005401664;XP_005401665 MODEL 8734140 protein-coding Cfap52 cilia and flagella associated protein 52 INVOLVED IN establishment of left/right asymmetry (ortholog); flagellated sperm motility (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN 9+2 motile cilium (ortholog); axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog) NW_004955467 7461258 7524178 - 102009485 AGCD01051436;AGCD01051437;GBDI01009801;XM_005399379;XM_005399380;XM_005399382 XP_005399436;XP_005399437;XP_005399439 MODEL 9053667 protein-coding Plppr5 phospholipid phosphatase related 5 INVOLVED IN positive regulation of filopodium assembly (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH thymoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955435 3700217 3818532 - 102020949 AGCD01032802;AGCD01032803;AGCD01032804;AGCD01032805;GBDF01209569;GBDJ01158982;XM_013516396 XP_013371850 MODEL 8894742 protein-coding Il31ra interleukin 31 receptor A ENCODES a protein that exhibits cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955446 11857882 11963867 - 102014507 AGCD01040215;AGCD01040216;AGCD01040217;AGCD01040218;AGCD01040219;AGCD01040220;GBDK01269090;XM_005392690;XM_005392691;XM_013518468 XP_005392747;XP_005392748;XP_013373922 MODEL 8887140 protein-coding LOC102013418 actin-like NW_004955420 22322153 22323606 - 102013418 AGCD01021196;GBCQ01147818;XM_013513570 XP_013369024 MODEL 8762066 pseudo LOC102008651 olfactory receptor 5W2-like NW_004955511 816950 817885 + 102008651 AGCD01066344 MODEL 9000713 protein-coding Cylc2 cylicin 2 INVOLVED IN acrosome assembly (ortholog); maintenance of cell number (ortholog); manchette assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoskeletal calyx (ortholog); perinuclear theca (ortholog); sperm glycocalyx (ortholog) NW_004955419 23183700 23218555 - 102006350 AGCD01020315;AGCD01020316;AGCD01020317;GBDF01045355;XM_005382791;XM_013513110;XM_013513111;XM_013513112;XM_013513113;XM_013513114;XM_013513115;XM_013513116;XM_013513117;XM_013513118 XP_005382848;XP_013368564;XP_013368565;XP_013368566;XP_013368567;XP_013368568;XP_013368569;XP_013368570;XP_013368571;XP_013368572 MODEL 8736607 protein-coding Cdc14a cell division cycle 14A INVOLVED IN sensory perception of sound (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 32 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); kinociliary basal body (ortholog); kinocilium (ortholog) NW_004955435 5099576 5230252 + 102022849 AGCD01032877;AGCD01032878;GBDF01005550;GBDJ01140455;XM_013516522 XP_013371976 MODEL 8849161 protein-coding Anxa6 annexin A6 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); cholesterol binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); calcium ion transport (ortholog); mitochondrial calcium ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); intercalated disc (ortholog); late endosome membrane (ortholog) NW_004955408 2522027 2565862 + 102017306 AGCD01008011;AGCD01008012;AGCD01008013;AGCD01008014;GBCB01006018;GBDI01016338;XM_013508182 XP_013363636 MODEL 9030682 protein-coding Atl1 atlastin GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN axonogenesis (ortholog); endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH depressive disorder (ortholog); dystonia (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955409 12222591 12301990 - 102022054 AGCD01009541;AGCD01009542;AGCD01009543;AGCD01009544;AGCD01009545;AGCD01009546;GBDF01044331;XM_005376821;XM_005376822 XP_005376878;XP_005376879 MODEL 39131745 rrna 5S_rRNA 5S ribosomal RNA 8941572 protein-coding LOC102010999 uncharacterized LOC102010999 NW_004955415 28977064 28978164 + 102010999 AGCD01016646;XM_005381137 XP_005381194 MODEL 8908394 ncrna LOC102013783 uncharacterized LOC102013783 NW_004955403 27358673 27399334 + 102013783 AGCD01002317;GBDF01287042;XR_001234401;XR_001234402 MODEL 9039655 protein-coding LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ENCODES a protein that exhibits calcidiol 1-monooxygenase activity (ortholog); secalciferol 1-monooxygenase activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion homeostasis (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955458 5472404 5477001 - 102011841 AGCD01047494;GBDF01140801;XM_005397416 XP_005397473 MODEL 15036854 trna Trnas-gga transfer RNA serine (anticodon GGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978803 39133961 misc_rna 7SK 7SK RNA 8774901 ncrna LOC102003180 uncharacterized LOC102003180 NW_004955547 143678 152995 + 102003180 AGCD01072134;GBBH01161629;XR_264896 MODEL 8932588 protein-coding Sos2 SOS Ras/Rho guanine nucleotide exchange factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); insulin receptor signaling pathway (ortholog); lymphocyte homeostasis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog) NW_004955409 12542353 12622165 + 102029054 AGCD01009552;AGCD01009553;AGCD01009554;AGCD01009555;AGCD01009556;GBBH01006505;GBCE01103866;XM_013510338 XP_013365792 MODEL 8709149 protein-coding LOC102007512 keratin-associated protein 10-7-like NW_004955407 41555800 41557892 - 102007512 AGCD01007870;XM_005375893 XP_005375950 MODEL 8907125 pseudo LOC102014153 protein S100-A10-like NW_004955426 7177248 7177540 - 102014153 AGCD01026186 MODEL 8947445 protein-coding Sgsm1 small G protein signaling modulator 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955455 258472 343079 - 102011400 AGCD01045555;GBDF01281537;XM_005396135;XM_005396136 XP_005396192;XP_005396193 MODEL 8785651 protein-coding LOC102008275 olfactory receptor 2B6-like NW_004955576 1201716 1202654 - 102008275 AGCD01075364;XM_005413943 XP_005414000 MODEL 8927680 pseudo LOC102018407 probable C-mannosyltransferase DPY19L2 pseudogene NW_004955493 1188575 1191835 + 102018407 AGCD01060884 MODEL 8851300 protein-coding Clic2 CLIC family member 2 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (ortholog); regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955594 374332 393802 + 102023095 AGCD01076427;GBDI01262822;XM_005414643 XP_005414700 MODEL 8930557 protein-coding Amfr autocrine motility factor receptor ENCODES a protein that exhibits BAT3 complex binding (ortholog); identical protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); learning or memory (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amenorrhea (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ATPase complex (ortholog); dendrite (ortholog); Derlin-1 retrotranslocation complex (ortholog) NW_004955433 14172871 14205484 - 102011692 AGCD01031707;AGCD01031708;GBCC01017957;GBCE01028798;XM_013516124 XP_013371578 MODEL 8800431 protein-coding Il33 interleukin 33 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-33 receptor binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to mechanical stimulus (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); allergic asthma (ortholog); Alzheimer's disease (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955434 10145449 10187595 + 102006603 AGCD01032327;GBBH01050842;XM_005388671;XM_005388672;XM_013516393 XP_005388728;XP_005388729;XP_013371847 MODEL 9020243 protein-coding Rspry1 ring finger and SPRY domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog) NW_004955433 14843521 14884083 + 102022845 AGCD01031730;GBDF01121224;XM_005388375;XM_005388377 XP_005388432;XP_005388434 MODEL 39131531 protein-coding FJX1 four-jointed box kinase 1 8707116 protein-coding Bpifb6 BPI fold containing family B member 6 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955422 28214188 28224604 - 102004396 AGCD01023345;GBDF01181601;XM_005384854 XP_005384911 MODEL 153211025 protein-coding C2orf81 chromosome 2 open reading frame 81 8826181 protein-coding Acp2 acid phosphatase 2, lysosomal ENCODES a protein that exhibits acid phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN autophagic cell death (ortholog); lysosome organization (ortholog); regulation of viral entry into host cell (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Acid Phosphatase Deficiency (ortholog); Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN lysosomal lumen (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955422 954108 961522 + 102023709 AGCD01022442;GBDF01127870;XM_005383978 XP_005384035 MODEL 8739944 protein-coding Prmt3 protein arginine methyltransferase 3 ENCODES a protein that exhibits histone H4R3 methyltransferase activity (ortholog); methyltransferase activity (ortholog); modified amino acid binding (ortholog); INVOLVED IN dendritic spine morphogenesis (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of retinoic acid biosynthetic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955476 1222579 1331582 + 102006767 AGCD01055203;AGCD01055204;GBBH01149628;GBDJ01388986;XM_005401723 XP_005401780 MODEL 8835142 ncrna LOC102004598 uncharacterized LOC102004598 NW_004955415 14680227 14691868 - 102004598 AGCD01016306;AGCD01016307;GBDJ01204578;XR_260294 MODEL 39132154 rrna 5S_rRNA 5S ribosomal RNA 9046497 protein-coding Ccdc120 coiled-coil domain containing 120 INVOLVED IN intracellular protein localization (ortholog); microtubule anchoring at centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Dwarfism (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); cytoplasm (ortholog) NW_004955543 577078 594076 + 102005510 AGCD01071593;GBDF01094455;XM_005411315;XM_013508175;XM_013508176;XM_013508177;XM_013508178;XM_013508179;XM_013508180;XM_013508181 XP_005411372;XP_013363629;XP_013363630;XP_013363631;XP_013363632;XP_013363633;XP_013363634;XP_013363635 MODEL 8998965 protein-coding Add3 adducin 3 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein kinase C binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN positive regulation of cytoskeleton organization (ortholog); positive regulation of vasoconstriction (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); brain ischemia (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) NW_004955485 1216435 1273275 - 102017665 AGCD01058474;AGCD01058475;GBDF01128305;XM_005403759;XM_013504104 XP_005403816;XP_013359558 MODEL 8924430 protein-coding LOC102004967 vomeronasal type-2 receptor 116-like NW_004955524 2220139 2229192 + 102004967 AGCD01068802;XM_013507194 XP_013362648 MODEL 9039029 protein-coding LOC102012215 aldose reductase-related protein 2-like NW_004955494 7960872 8029450 - 102012215 AGCD01061559;AGCD01061560;AGCD01061561;AGCD01061562;AGCD01061563;AGCD01061564;AGCD01061565;AGCD01061566;AGCD01061567;AGCD01061568;AGCD01061569;GBBH01186150;XM_013505016 XP_013360470 MODEL 8983276 protein-coding Rdm1 RAD52 motif containing 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog) NW_004955451 15002098 15011338 + 102022039 AGCD01043590;AGCD01043591;GBBH01050938;GBDF01220846;XM_013519359 XP_013374813 MODEL 8748680 protein-coding Axdnd1 axonemal dynein light chain domain containing 1 INVOLVED IN axoneme assembly (ortholog); establishment of Sertoli cell barrier (ortholog); leukocyte migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955406 18717383 18859263 + 102003088 AGCD01006057;AGCD01006058;AGCD01006059;AGCD01006060;AGCD01006061;AGCD01006062;AGCD01006063;AGCD01006064;AGCD01006065;AGCD01006066;AGCD01006067;AGCD01006068;GBDF01083157;XM_005374953;XM_005374954;XM_005374955;XM_005374956;XM_005374957;XM_005374958;XM_013521187;XM_013521195 XP_005375010;XP_005375011;XP_005375012;XP_005375013;XP_005375014;XP_005375015;XP_013376641;XP_013376649 MODEL 9047280 protein-coding Dnah17 dynein axonemal heavy chain 17 INVOLVED IN outer dynein arm assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); outer dynein arm (ortholog); sperm end piece (ortholog) NW_004955506 4042768 4161022 + 102007139 AGCD01065324;AGCD01065325;AGCD01065326;GBDF01045118;XM_005407377;XM_013506036 XP_005407434;XP_013361490 MODEL 8951713 protein-coding Lrba LPS responsive beige-like anchor protein INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitophagy (ortholog); protein localization to phagophore assembly site (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955471 5052535 5649696 - 102021651 AGCD01053095;AGCD01053096;AGCD01053097;AGCD01053098;AGCD01053099;AGCD01053100;AGCD01053101;AGCD01053102;AGCD01053103;AGCD01053104;AGCD01053105;AGCD01053106;AGCD01053107;GBCQ01037607;GBCQ01037609;XM_013522882 XP_013378336 MODEL 8886398 pseudo LOC102009045 60S ribosomal protein L12-like NW_004955475 11058006 11058745 + 102009045 AGCD01055139 MODEL 8708424 protein-coding Wdr76 WD repeat domain 76 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN heterochromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955416 10280112 10337963 + 102015196 AGCD01017129;AGCD01017130;AGCD01017131;AGCD01017132;AGCD01017133;AGCD01017134;AGCD01017135;GBDF01163138;XM_005381415;XM_013512615;XM_013512616;XM_013512617 XP_005381472;XP_013368069;XP_013368070;XP_013368071 MODEL 9046842 protein-coding Ahrr aryl-hydrocarbon receptor repressor INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nitric oxide metabolic process (ortholog); ASSOCIATED WITH hypertension (ortholog); Prenatal Exposure Delayed Effects (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955504 121739 191871 + 102019620 AGCD01064816;GBDJ01054828;XM_005406993;XM_005406995;XM_013505865 XP_005407050;XP_005407052;XP_013361319 MODEL 39134233 misc_rna 7SK 7SK RNA 8971569 protein-coding LOC102007129 cyclic nucleotide-binding domain-containing protein 2-like NW_004955488 6614698 6616169 - 102007129 AGCD01059662;XM_013504412 XP_013359866 MODEL 8821763 pseudo LOC102004232 40S ribosomal protein S3 pseudogene NW_004955451 1507223 1508030 - 102004232 AGCD01042972 MODEL 8835286 protein-coding Atl2 atlastin GTPase 2 ENCODES a protein that exhibits GTPase activity (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network membrane (ortholog) NW_004955441 6004209 6034484 - 102009547 AGCD01036895;AGCD01036896;AGCD01036897;GBCC01008708;XM_005390883 XP_005390940 MODEL 8920272 protein-coding Fkbp10 FKBP prolyl isomerase 10 ENCODES a protein that exhibits FK506 binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN aorta morphogenesis (ortholog); collagen fibril organization (ortholog); extracellular matrix assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Bruck syndrome (ortholog); Bruck Syndrome 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); membrane (ortholog) NW_004955451 16025008 16031950 + 102006529 AGCD01043648;GBDJ01004397;GBDJ01004405;XM_005394418 XP_005394475 MODEL 39134093 misc_rna 7SK 7SK RNA 8834980 protein-coding LOC102022491 olfactory receptor 52I1-like NW_004955414 20188826 20191310 + 102022491 AGCD01015360;XM_013512019 XP_013367473 MODEL 8949528 protein-coding Ceacam1 CEA cell adhesion molecule 1 ENCODES a protein that exhibits actin binding (ortholog); bile acid transmembrane transporter activity (ortholog); calmodulin binding (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); blood vessel development (ortholog); calcium-dependent cell-cell adhesion (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Lung Neoplasms (ortholog); Spontaneous Abortions (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apical plasma membrane (ortholog) NW_004955555 426894 446235 + 102020849 AGCD01073032;GBDK01232955;XM_005412355;XM_005412357;XM_013508680;XR_264959 XP_005412412;XP_005412414;XP_013364134 MODEL 8748192 pseudo LOC102007514 COMM domain-containing protein 1-like NW_004955407 20893031 20899078 - 102007514 AGCD01007345 MODEL 8719849 protein-coding LOC102009819 splicing factor, arginine/serine-rich 19-like NW_004955413 3207197 3209122 - 102009819 AGCD01013568;GBDI01085078;XM_005378751;XM_005378752;XM_013511272;XR_001232932 XP_005378808;XP_005378809;XP_013366726 MODEL 8717294 ncrna LOC102013421 uncharacterized LOC102013421 NW_004955487 9461547 9465656 - 102013421 AGCD01059459;XR_263994 MODEL 8968174 protein-coding LOC102010231 uncharacterized LOC102010231 NW_004955408 30891040 30894592 + 102010231 AGCD01008817;GBDF01045340;XM_005376478;XR_259728 XP_005376535 MODEL 8829762 protein-coding Plrg1 pleiotropic regulator 1 INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); protein localization to nucleus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); DNA replication factor A complex (ortholog); fibrillar center (ortholog) NW_004955471 8764465 8777396 - 102007988 AGCD01053193;AGCD01053194;GBDJ01085184;XM_005400930 XP_005400987 MODEL 8820360 protein-coding LOC102008652 heterogeneous nuclear ribonucleoprotein A1-like NW_004955514 3637451 3647575 + 102008652 AGCD01067102;XM_013506747 XP_013362201 MODEL 8830301 protein-coding Slc39a12 solute carrier family 39 member 12 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of sprouting angiogenesis (ortholog); regulation of microtubule polymerization (ortholog); regulation of neuron projection development (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955429 10053022 10116713 - 102026241 AGCD01028665;AGCD01028666;XM_005386957;XM_013515346;XM_013515347;XM_013515348;XM_013515349 XP_005387014;XP_013370800;XP_013370801;XP_013370802;XP_013370803 MODEL 8887927 pseudo LOC102006025 copine-8 pseudogene NW_004955474 8226314 8227620 + 102006025 AGCD01054546 MODEL 8879416 protein-coding Cdc14b cell division cycle 14B ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 23303472 23445785 + 102008636 AGCD01023187;AGCD01023188;AGCD01023189;AGCD01023190;GBCE01029603;XM_005384690;XM_013514076;XM_013514077;XM_013514078;XM_013514079;XM_013514080;XM_013514081;XM_013514082;XM_013514083;XM_013514084 XP_005384747;XP_013369530;XP_013369531;XP_013369532;XP_013369533;XP_013369534;XP_013369535;XP_013369536;XP_013369537;XP_013369538 MODEL 8736415 protein-coding LOC102008276 olfactory receptor 2H1 NW_004955583 74419 75726 + 102008276 AGCD01075793;GBDI01145055;XM_005414287 XP_005414344 MODEL 8967882 protein-coding Clic3 CLIC family member 3 ENCODES a protein that exhibits chloride channel activity (ortholog); protein-disulfide reductase (glutathione) activity (ortholog); INVOLVED IN chloride transport (ortholog); positive regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); nuclear body (ortholog) NW_004955513 5020105 5022000 - 102028783 AGCD01066950;AGCD01066951;GBCB01067084;GBDJ01316745;XM_013506644 XP_013362098 MODEL 8883561 protein-coding Abcb11 ATP binding cassette subfamily B member 11 ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); bile acid transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid metabolic process (ortholog); canalicular bile acid transport (ortholog); PARTICIPATES IN statin pharmacokinetics pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); benign recurrent intrahepatic cholestasis 2 (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955449 5412958 5511629 + 102003503 AGCD01041932;AGCD01041933;AGCD01041934;AGCD01041935;AGCD01041936;AGCD01041937;AGCD01041938;AGCD01041939;GBBH01010252;XM_005393267;XM_005393268;XM_013518807;XM_013518809 XP_005393324;XP_005393325;XP_013374261;XP_013374263 MODEL 8887681 protein-coding Arfgef2 ARF guanine nucleotide exchange factor 2 ENCODES a protein that exhibits GABA receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); myosin binding (ortholog); INVOLVED IN endomembrane system organization (ortholog); endosome organization (ortholog); exocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Cognitive Dysfunction (ortholog); FOUND IN asymmetric synapse (ortholog); axonemal microtubule (ortholog); cytoplasmic vesicle (ortholog) NW_004955445 9069803 9153746 - 102008272 AGCD01039623;AGCD01039624;GBBH01065316;XM_005392338;XM_005392340 XP_005392395;XP_005392397 MODEL 8917430 pseudo LOC102011002 dolichol-phosphate mannosyltransferase subunit 1 pseudogene NW_004955416 12229992 12241469 - 102011002 AGCD01017202 MODEL 8998851 protein-coding LOC102013784 cell division control protein 45 homolog NW_004955811 4973 14812 + 102013784 AGCD01078393;GBBH01171184;XM_005415119 XP_005415176 MODEL 8858668 protein-coding LOC102011844 cytochrome c oxidase assembly factor 1 homolog INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial complex I intermediate assembly complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955460 182778 285053 + 102011844 AGCD01048337;AGCD01048338;AGCD01048339;GBDF01047278;XM_005397712 XP_005397769 MODEL 39133962 misc_rna 7SK 7SK RNA 8726565 protein-coding LOC102003182 protamine-2 NW_004955442 7306731 7307449 + 102003182 AGCD01037623;GBDF01007122;XM_005391168 XP_005391225 MODEL 8958388 ncrna LOC102004599 uncharacterized LOC102004599 NW_004955415 30427848 30429710 + 102004599 AGCD01016664;GBDF01085687;XR_260328 MODEL 8712765 protein-coding Cfap53 cilia and flagella associated protein 53 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); dextrocardia (ortholog); esophageal cancer (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal A tubule inner sheath (ortholog) NW_004955402 35295007 35318800 - 102015679 AGCD01000878;GBDJ01272671;XM_005372915;XM_013510706 XP_005372972;XP_013366160 MODEL 8750916 protein-coding Sost sclerostin ENCODES a protein that exhibits carbohydrate binding (ortholog); DNA-binding transcription factor binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN cellular response to parathyroid hormone stimulus (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH autosomal dominant craniodiaphyseal dysplasia (ortholog); genetic disease (ortholog); osteochondrodysplasia (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); protein-containing complex (ortholog) NW_004955451 17054939 17058027 - 102004446 AGCD01043715;AGCD01043716;GBCE01062769;XM_005394641 XP_005394698 MODEL 8747668 pseudo LOC102014154 olfactory receptor 5K3-like NW_004955427 3741 6007 + 102014154 AGCD01026796 MODEL 8936361 protein-coding Cyld CYLD lysine 63 deubiquitinase ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); homeostasis of number of cells (ortholog); innate immune response (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Brooke-Spiegler syndrome (ortholog); cervical cancer (ortholog); Frontotemporal Dementia and/or Amyotrophic Lateral Sclerosis-8 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955433 8788867 8845925 + 102017373 AGCD01031603;GBDF01085055;XM_005388274;XM_005388275;XM_005388276;XM_005388277;XM_005388278;XM_005388279 XP_005388331;XP_005388332;XP_005388333;XP_005388334;XP_005388335;XP_005388336 MODEL 8908613 protein-coding Erg28 ergosterol biosynthesis 28 homolog ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN transport vesicle (ortholog) NW_004955612 99107 109679 - 102022872 AGCD01077180;GBDK01014402;XM_005414961;XM_005414962 XP_005415018;XP_005415019 MODEL 9053022 protein-coding Anxa7 annexin A7 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN autophagy (ortholog); cell population proliferation (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN alveolar lamellar body (ortholog); chromaffin granule membrane (ortholog); cytosol (ortholog) NW_004955437 18394371 18421779 + 102018767 AGCD01034790;AGCD01034791;GBDI01027399;XM_005389980;XM_013516762;XM_013516763 XP_005390037;XP_013372216;XP_013372217 MODEL 8916773 protein-coding LOC102018410 vomeronasal type-2 receptor 116-like NW_004955495 45276 78599 - 102018410 AGCD01061594;AGCD01061595;AGCD01061596;XM_013505040 XP_013360494 MODEL 8944509 protein-coding Rdx radixin ENCODES a protein that exhibits actin binding (ortholog); ATPase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN apical protein localization (ortholog); barbed-end actin filament capping (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 24 (ortholog); cervical cancer (ortholog); cholestasis (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955412 12100436 12184444 - 102009923 AGCD01012805;AGCD01012806;AGCD01012807;AGCD01012808;AGCD01012809;AGCD01012810;AGCD01012811;AGCD01012812;GBCB01000997;XM_005378052;XM_005378053;XM_013511100;XM_013511101;XM_013511102 XP_005378109;XP_005378110;XP_013366554;XP_013366555;XP_013366556 MODEL 8837581 protein-coding Amh anti-Mullerian hormone ENCODES a protein that exhibits signaling receptor binding (ortholog); transforming growth factor beta receptor binding (ortholog); type II transforming growth factor beta receptor binding (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); Leydig cell differentiation (ortholog); Mullerian duct regression (ortholog); ASSOCIATED WITH breast cancer (ortholog); cone-rod dystrophy 20 (ortholog); disorder of sexual development (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); serine/threonine protein kinase complex (ortholog) NW_004955495 5893375 5896152 - 102016613 AGCD01062043;GBDJ01028983;XM_005405913 XP_005405970 MODEL 8862821 protein-coding Axin1 axin 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN axial mesoderm development (ortholog); axial mesoderm formation (ortholog); beta-catenin destruction complex assembly (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; N-cadherin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Caudal Duplication Anomaly (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cell cortex (ortholog); cell periphery (ortholog) NW_004955442 16845728 16898301 + 102030483 AGCD01037918;AGCD01037919;AGCD01037920;AGCD01037921;GBDK01223506;XM_005391658;XM_013517744 XP_005391715;XP_013373198 MODEL 8927755 protein-coding Rsrc1 arginine and serine rich coiled-coil 1 INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA splicing, via spliceosome (ortholog); nucleocytoplasmic transport (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 70 (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955448 8947553 9249465 + 102025411 AGCD01041456;AGCD01041457;AGCD01041458;AGCD01041459;AGCD01041460;AGCD01041461;AGCD01041462;AGCD01041463;AGCD01041464;AGCD01041465;AGCD01041466;AGCD01041467;XM_013518587 XP_013374041 MODEL 39134235 misc_rna 7SK 7SK RNA 8933022 protein-coding Bpifc BPI fold containing family C ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955405 41376471 41403410 - 102028820 AGCD01005549;GBCC01004323;GBDI01161130;XM_013519152 XP_013374606 MODEL 8951238 ncrna LOC102007135 uncharacterized LOC102007135 NW_004955425 7696784 7698489 - 102007135 AGCD01025391;XR_261135 MODEL 8719081 protein-coding C3 complement C3 ENCODES a protein that exhibits antigen binding (ortholog); C5L2 anaphylatoxin chemotactic receptor binding (ortholog); chemokine activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); B cell activation (ortholog); complement activation (ortholog); PARTICIPATES IN classical complement pathway; ASSOCIATED WITH otitis media; acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cell surface (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); cytoplasmic side of Golgi membrane (ortholog) NW_004955495 2796601 2824233 + 102006475 AGCD01061799;AGCD01061800;AGCD01061801;AGCD01061802;GBDJ01009718;XM_005405700 XP_005405757 MODEL 8760599 protein-coding Ahsa1 activator of HSP90 ATPase activity 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); Hsp90 protein binding (ortholog); protein folding chaperone (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955438 1351475 1359351 + 102016198 AGCD01034980;GBDF01261909;XM_005390201 XP_005390258 MODEL 8970682 protein-coding Ccdc121 coiled-coil domain containing 121 NW_004955469 7771788 7774261 + 102006565 AGCD01052432;GBCE01049803;XM_005400410 XP_005400467 MODEL 8764093 protein-coding Prmt5 protein arginine methyltransferase 5 ENCODES a protein that exhibits chromatin binding (ortholog); E-box binding (ortholog); histone H2AR3 methyltransferase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); chromatin remodeling (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955409 37369507 37378034 + 102028833 AGCD01010511;GBDF01049663;XM_005377107;XM_005377109;XM_005377110 XP_005377164;XP_005377166;XP_005377167 MODEL 8870227 pseudo LOC102004969 putative protein FAM10A5 NW_004955435 22847866 22848965 + 102004969 AGCD01033522 MODEL 8879723 protein-coding Adgb androglobin INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN sperm annulus (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955439 14144056 14268983 - 102019108 AGCD01035972;AGCD01035973;GBDF01081438;XM_005390627;XM_013517404;XM_013517405;XM_013517406;XM_013517407 XP_005390684;XP_013372858;XP_013372859;XP_013372860;XP_013372861 MODEL 8825690 protein-coding Sgsm2 small G protein signaling modulator 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN late endosome to Golgi transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog) NW_004955481 871719 907326 - 102010902 AGCD01056816;GBDF01081055;XM_005402592;XM_005402593;XM_005402594 XP_005402649;XP_005402650;XP_005402651 MODEL 8877689 pseudo LOC102003185 protein phosphatase inhibitor 2 pseudogene NW_004955562 2132567 2195973 - 102003185 AGCD01074022;AGCD01074023;AGCD01074024;AGCD01074025;AGCD01074026;AGCD01074027;AGCD01074028;XM_005413094 MODEL 8733238 protein-coding Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 4A (ortholog); autosomal dominant nonsyndromic deafness 4B (ortholog); autosomal recessive nonsyndromic deafness 113 (ortholog); FOUND IN extracellular region (ortholog); stereocilium tip (ortholog) NW_004955555 1859220 1878912 + 102026359 AGCD01073108;AGCD01073109;AGCD01073110;GBDF01006879;XM_005412473 XP_005412530 MODEL 8901800 pseudo LOC102007517 swi5-dependent recombination DNA repair protein 1 homolog pseudogene NW_004955408 24197900 24198617 + 102007517 AGCD01008599 MODEL 8874236 protein-coding Dnah2 dynein axonemal heavy chain 2 INVOLVED IN cilium movement (ortholog); cilium-dependent cell motility (ortholog); inner dynein arm assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axonemal dynein complex (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955467 9107089 9210941 - 102003107 AGCD01051484;GBDI01187193;XM_005399455;XM_005399456;XM_005399457;XM_005399458 XP_005399512;XP_005399513;XP_005399514;XP_005399515 MODEL 8868640 protein-coding Acp3 acid phosphatase 3 ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); acid phosphatase activity (ortholog); choline binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); dephosphorylation (ortholog); nucleotide metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acid phosphatase complex (ortholog); apical part of cell (ortholog); extracellular region (ortholog) NW_004955501 6168083 6218934 - 102007574 AGCD01064181;AGCD01064182;AGCD01064183;GBBH01101532;XM_005406838;XM_013505810 XP_005406895;XP_013361264 MODEL 8979095 protein-coding LOC102006026 cystatin-13-like NW_004955415 30473505 30482358 + 102006026 AGCD01016664;GBDF01008193;XM_005380973 XP_005381030 MODEL 8766291 protein-coding Lrch1 leucine rich repeats and calponin homology domain containing 1 INVOLVED IN cellular response to chemokine (ortholog); negative regulation of T cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955431 404575 501268 + 102009747 AGCD01029867;AGCD01029868;GBDI01262523;XM_013515721 XP_013371175 MODEL 8709647 protein-coding Cdc16 cell division cycle 16 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955404 47126 71602 - 102028259 AGCD01003194;GBBH01228480;GBDJ01129351;XM_013515461;XM_013515464;XM_013515469;XM_013515473;XM_013515476 XP_013370915;XP_013370918;XP_013370923;XP_013370927;XP_013370930 MODEL 8804785 ncrna LOC102004236 uncharacterized LOC102004236 NW_004955406 7288327 7301552 - 102004236 AGCD01005768;XR_259482 MODEL 8896221 protein-coding Abcb5 ATP binding cassette subfamily B member 5 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); efflux transmembrane transporter activity (ortholog); INVOLVED IN eye development (ortholog); regulation of membrane potential (ortholog); transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 23283263 23379000 + 102003951 AGCD01011097;AGCD01011098;AGCD01011099;GBDJ01161751;XM_005377366 XP_005377423 MODEL 39132157 rrna 5S_rRNA 5S ribosomal RNA 39134094 misc_rna 7SK 7SK RNA 8831066 protein-coding Atl3 atlastin GTPase 3 ENCODES a protein that exhibits GTPase activity (ortholog); GTPase-dependent fusogenic activity (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary sensory neuropathy type 1F (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) NW_004955422 21359152 21406151 + 102030206 AGCD01023116;GBDF01081785;XM_005384671;XM_005384672 XP_005384728;XP_005384729 MODEL 39133963 misc_rna 7SK 7SK RNA 8920577 protein-coding Il33r interleukin 33 receptor ENCODES a protein that exhibits interleukin-33 binding (ortholog); interleukin-33 receptor activity (ortholog); INVOLVED IN cellular response to endothelin (ortholog); cellular response to mechanical stimulus (ortholog); inflammatory response (ortholog); ASSOCIATED WITH acute asthma (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular matrix (ortholog) NW_004955470 7779828 7849157 + 102020238 AGCD01052809;AGCD01052810;AGCD01052811;AGCD01052812;GBCE01046532;XM_005400767;XM_005400768;XM_013522847;XM_013522848;XM_013522849;XM_013522850;XM_013522851;XM_013522852;XM_013522853;XM_013522854 XP_005400824;XP_005400825;XP_013378301;XP_013378302;XP_013378303;XP_013378304;XP_013378305;XP_013378306;XP_013378307;XP_013378308 MODEL 39131746 rrna 5S_rRNA 5S ribosomal RNA 8988138 ncrna LOC102004602 uncharacterized LOC102004602 NW_004955418 11360846 11376911 + 102004602 AGCD01019002;GBDF01041709;XR_260555 MODEL 8708380 pseudo LOC102010232 suppressor of cytokine signaling 5-like NW_004955458 3896343 3898873 + 102010232 AGCD01047353 MODEL 9009582 protein-coding Cfap54 cilia and flagella associated protein 54 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); cilium movement involved in cell motility (ortholog); ASSOCIATED WITH primary ciliary dyskinesia 54 (ortholog); spermatogenic failure 98 (ortholog) NW_004955405 32728455 33036612 + 102010664 AGCD01005342;AGCD01005343;AGCD01005344;AGCD01005345;AGCD01005346;AGCD01005347;AGCD01005348;AGCD01005349;AGCD01005350;GBDF01128253;XM_005374497;XM_013518536;XM_013518540;XM_013518543;XM_013518547 XP_005374554;XP_013373990;XP_013373994;XP_013373997;XP_013374001 MODEL 8789174 pseudo LOC102008653 dual specificity mitogen-activated protein kinase kinase 1 pseudogene NW_004955515 3622654 3623565 - 102008653 AGCD01067294 MODEL 8913414 protein-coding Pls1 plastin 1 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); intestinal D-glucose absorption (ortholog); microvillus assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 76 (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); stereocilium (ortholog) NW_004955508 3215304 3324240 - 102012672 AGCD01065806;GBDI01000738;XM_005407737;XM_013506262 XP_005407794;XP_013361716 MODEL 8982355 protein-coding LOC102009047 protein FAM122A-like NW_004955415 23111023 23111850 + 102009047 AGCD01016551;XM_013512167 XP_013367621 MODEL 9013697 protein-coding Wdr77 WD repeat domain 77 ENCODES a protein that exhibits methyl-CpG binding (ortholog); transcription coactivator activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of epithelial cell proliferation involved in prostate gland development (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lymphoma (ortholog); FOUND IN Cul4B-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955435 14929202 14940439 - 102027005 AGCD01033258;GBDF01183170;XM_005388949;XM_013516496 XP_005389006;XP_013371950 MODEL 8717643 protein-coding Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955408 25540149 25644108 + 102027272 AGCD01008647;GBCB01057939;XM_005376342;XM_013509355;XM_013509357;XM_013509359 XP_005376399;XP_013364809;XP_013364811;XP_013364813 MODEL 9049507 trna Trnas-uga transfer RNA serine (anticodon UGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955425;NW_004955465 756793;20176554;13268508 756874;20176635;13268589 +;+;+ 101978804 AGCD01025718;AGCD01050595;AGCD01057629 MODEL 8941360 protein-coding Rsrc2 arginine and serine rich coiled-coil 2 ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955482 6119810 6138984 + 102029182 AGCD01057374;GBDF01053615;XM_005403076;XM_005403077;XM_013503706 XP_005403133;XP_005403134;XP_013359160 MODEL 8770092 protein-coding Fkbp11 FKBP prolyl isomerase 11 ASSOCIATED WITH Animal Disease Models (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955500 7744429 7747289 - 102028213 AGCD01063944;GBCB01007590;GBDF01084575;XM_013505646 XP_013361100 MODEL 8925499 ncrna LOC102011004 uncharacterized LOC102011004 NW_004955418 480761 481468 + 102011004 AGCD01018677;GBDK01046238;XR_260530 MODEL 8738985 ncrna LOC102011849 uncharacterized LOC102011849 NW_004955411 18463238 18501880 - 102011849 AGCD01012008;AGCD01012009;GBDI01303319;XR_259937 MODEL 8787852 ncrna LOC102013431 uncharacterized LOC102013431 NW_004955504 2733042 2738476 - 102013431 AGCD01064859;AGCD01064860;GBDF01281745;XR_264289 MODEL 9017215 ncrna LOC102014156 uncharacterized LOC102014156 NW_004955511 2259218 2268513 + 102014156 AGCD01066396;GBDF01178034;XR_264416 MODEL 9046488 pseudo LOC102004970 dnaJ homolog subfamily C member 10-like NW_004955532 396089 401693 - 102004970 AGCD01070116;AGCD01070117 MODEL 8979794 protein-coding LOC102009822 TRIO and F-actin-binding protein NW_004955413 24125506 24147260 + 102009822 AGCD01014348;AGCD01014349;GBDI01083298;GBDK01078508;XM_005379226 XP_005379283 MODEL 8802173 protein-coding Anxa9 annexin A9 ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); phosphatidylserine binding (ortholog); phospholipid binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); lateral plasma membrane (ortholog) NW_004955588 352175 374723 + 102016003 AGCD01076106;AGCD01076107;AGCD01076108;GBCQ01039606;XM_005414458;XM_013509917;XM_013509918;XM_013509919;XM_013509920 XP_005414515;XP_013365371;XP_013365372;XP_013365373;XP_013365374 MODEL 8861444 ncrna LOC102008279 uncharacterized LOC102008279 NW_004955450 14296448 14299942 - 102008279 AGCD01042742;GBDF01052413;XR_001235869;XR_001235870 MODEL 8780496 protein-coding Ceacam19 CEA cell adhesion molecule 19 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955555 1850356 1857551 + 102026047 AGCD01073107;AGCD01073108;XM_005412472;XM_013508675 XP_005412529;XP_013364129 MODEL 8707134 protein-coding Clic4 CLIC family member 4 ENCODES a protein that exhibits chloride channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Dwarfism (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN anchoring junction (ortholog); apical part of cell (ortholog); cell surface (ortholog) NW_004955452 4479783 4534115 + 102005101 AGCD01043983;AGCD01043984;GBCB01039631;XM_005394817 XP_005394874 MODEL 8799405 protein-coding Rec114 REC114 meiotic recombination protein INVOLVED IN meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 10 (ortholog); FOUND IN chromosome (ortholog) NW_004955450 4002734 4076292 - 102023415 AGCD01042453;AGCD01042454;GBDF01155136;XM_005393591;XM_005393592;XM_005393593;XM_005393594 XP_005393648;XP_005393649;XP_005393650;XP_005393651 MODEL 9033097 ncrna LOC102012219 uncharacterized LOC102012219 NW_004955495 5440402 5443188 - 102012219 AGCD01062007;GBDF01145786;XR_001231364 MODEL 39134236 misc_rna 7SK 7SK RNA 8843329 protein-coding LOC102018412 gastrokine-3-like NW_004955424 16081754 16088325 - 102018412 AGCD01024737;GBDI01336159;XM_005385655 XP_005385712 MODEL 8872240 protein-coding Arfgef3 ARFGEF family member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955436 21220743 21366477 - 102018131 AGCD01034050;AGCD01034051;GBBH01150141;GBDF01075891;XM_013516654 XP_013372108 MODEL 9036982 pseudo LOC102013785 transcription elongation factor B polypeptide 1 pseudogene NW_004955403 40364261 40364595 + 102013785 AGCD01002683 MODEL 8707171 pseudo LOC102007137 glucose-6-phosphatase 3 pseudogene NW_004955503 444692 461910 + 102007137 AGCD01064504 MODEL 8874000 protein-coding Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 ENCODES a protein that exhibits 3'(2'),5'-bisphosphate nucleotidase activity (ortholog); inositol-1,4-bisphosphate 1-phosphatase activity (ortholog); magnesium ion binding (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); familial hypercholesterolemia (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955520 3521096 3543255 + 102023516 AGCD01068105;GBDF01128212;XM_005409271;XM_005409272;XM_005409273;XM_005409274;XM_005409275;XR_264596 XP_005409328;XP_005409329;XP_005409330;XP_005409331;XP_005409332 MODEL 8906627 pseudo LOC102022495 leucine-rich repeat-containing protein 58 pseudogene NW_004955475 2731063 2732539 - 102022495 AGCD01054818 MODEL 8814856 ncrna LOC102004241 uncharacterized LOC102004241 NW_004955407 29963859 29996079 + 102004241 AGCD01007621;GBDF01307914;XR_001231683;XR_259593 MODEL 8757948 protein-coding C3ar1 complement C3a receptor 1 ENCODES a protein that exhibits complement component C3a binding (ortholog); complement component C3a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); complement receptor mediated signaling pathway (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 6707003 6715689 - 102028398 AGCD01013772;GBBH01222006;XM_005378913;XM_005378914;XM_005378915;XM_013511497;XM_013511498 XP_005378970;XP_005378971;XP_005378972;XP_013366951;XP_013366952 MODEL 8843280 protein-coding Rsrp1 arginine and serine rich protein 1 INVOLVED IN spliceosomal complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular dysplasia 14 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleus (ortholog) NW_004955452 4865330 4871049 - 102016127 AGCD01043997;AGCD01043998;GBBH01030866;GBCQ01035581;XM_013519667 XP_013375121 MODEL 39134095 misc_rna 7SK 7SK RNA 39131334 protein-coding CYREN cell cycle regulator of NHEJ 8970273 protein-coding Prmt6 protein arginine methyltransferase 6 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H2AR3 methyltransferase activity (ortholog); INVOLVED IN cellular senescence (ortholog); chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955435 10816787 10818047 + 102015441 AGCD01033100;GBCB01051915;XM_005388819 XP_005388876 MODEL 8807755 protein-coding Sostdc1 sclerostin domain containing 1 ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN hair follicle morphogenesis (ortholog); mammary gland bud morphogenesis (ortholog); negative regulation of BMP signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955410 19657805 19662121 - 102022057 AGCD01011027;GBDI01025966;XM_005377334 XP_005377391 MODEL 8708960 protein-coding Atm ATM serine/threonine kinase ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); DNA-dependent protein kinase activity (ortholog); histone H2AXS139 kinase activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to gamma radiation (ortholog); cellular response to ionizing radiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; nuclear factor kappa B signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955412 10422753 10531406 + 102005238 AGCD01012767;AGCD01012768;AGCD01012769;GBDF01279272;XM_005378035;XM_013510995;XM_013510996;XR_001232882 XP_005378092;XP_013366449;XP_013366450 MODEL 8743377 ncrna LOC102003187 uncharacterized LOC102003187 NW_004955574 857172 858868 - 102003187 AGCD01075135;GBBH01101002;XR_265062 MODEL 8723956 pseudo LOC102007523 NEDD8-conjugating enzyme Ubc12 pseudogene NW_004955409 21637990 21714722 + 102007523 AGCD01009975;AGCD01009976;AGCD01009977;AGCD01009978;XM_005377162 MODEL 39131747 rrna 5S_rRNA 5S ribosomal RNA 8935220 protein-coding Sgsm3 small G protein signaling modulator 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); plasma membrane to endosome transport (ortholog); positive regulation of protein catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Autosomal Recessive Intellectual Developmental Disorder 84 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); gap junction (ortholog) NW_004955413 26094170 26139062 + 102008837 AGCD01014423;AGCD01014424;GBDF01054066;XM_005379314;XM_005379315;XM_005379318;XM_005379319;XM_005379320;XM_005379321;XM_013511485;XM_013511486 XP_005379371;XP_005379372;XP_005379375;XP_005379376;XP_005379377;XP_005379378;XP_013366939;XP_013366940 MODEL 8791010 protein-coding Axin2 axin 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); I-SMAD binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); bone mineralization (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Animal Disease Models (ortholog); anodontia (ortholog); asthma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955478 4952551 4982223 - 102005373 AGCD01055860;GBDJ01272005;GBDK01279480;XM_013503241 XP_013358695 MODEL 9012606 protein-coding Acp4 acid phosphatase 4 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN negative regulation of ERBB4 signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of protein processing (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1J (ortholog); cholangiocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog); synaptic membrane (ortholog) NW_004955559 481953 488464 - 102013765 AGCD01073587;GBDF01196190;XM_005412767;XM_005412769;XM_005412770;XM_013509062;XM_013509063;XM_013509064 XP_005412824;XP_005412826;XP_005412827;XP_013364516;XP_013364517;XP_013364518 MODEL 8794617 protein-coding LOC102006031 zinc finger protein 14-like NW_004955417 31556784 31573000 - 102006031 AGCD01018655;AGCD01018656;GBDJ01003802;XM_013512775 XP_013368229 MODEL 8808916 protein-coding Dnah3 dynein axonemal heavy chain 3 INVOLVED IN inner dynein arm assembly (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog) NW_004955493 211458 363988 - 102005720 AGCD01060843;AGCD01060844;AGCD01060845;AGCD01060846;AGCD01060847;GBBH01117267;XM_013504828 XP_013360282 MODEL 9015673 protein-coding Ccdc122 coiled-coil domain containing 122 ASSOCIATED WITH Breast Cancer, Familial (ortholog); leprosy (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955518 1746832 1776266 - 102009411 AGCD01067763;GBDF01238412;XM_005409072 XP_005409129 MODEL 8983166 protein-coding Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha ENCODES a protein that exhibits BAT3 complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of ERAD pathway (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955495 5025038 5051810 - 102018300 AGCD01061970;AGCD01061971;AGCD01061972;GBCE01081756;XM_005405830;XM_005405831;XM_005405832;XM_013505255;XM_013505256;XM_013505257 XP_005405887;XP_005405888;XP_005405889;XP_013360709;XP_013360710;XP_013360711 MODEL 9022945 protein-coding Fkbp14 FKBP prolyl isomerase 14 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH congenital muscular dystrophy (ortholog); Ehlers-Danlos syndrome kyphoscoliotic type 2 (ortholog) NW_004955410 31313637 31325544 - 102018479 AGCD01011321;GBCE01159547;XM_005377493 XP_005377550 MODEL 8785268 protein-coding Slc39a13 solute carrier family 39 member 13 ENCODES a protein that exhibits protein homodimerization activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell migration (ortholog); cellular response to stress (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955422 845076 852772 - 102022302 AGCD01022437;AGCD01022438;AGCD01022439;GBBH01093129;GBDF01081895;XM_005383973 XP_005384030 MODEL 8831381 ncrna LOC102011851 uncharacterized LOC102011851 NW_004955412 12945686 12959032 - 102011851 AGCD01012826;GBDF01076106;XR_259986 MODEL 8745526 ncrna LOC102010234 uncharacterized LOC102010234 NW_004955463 10201295 10205872 - 102010234 AGCD01049806;GBDF01116012;XR_263170 MODEL 9011618 protein-coding LOC102004603 disintegrin and metalloproteinase domain-containing protein 1a-like NW_004955482 8437339 8442885 + 102004603 AGCD01057520;GBDK01219783;XM_005403177 XP_005403234 MODEL 9029306 ncrna LOC102004973 uncharacterized LOC102004973 NW_004955438 10817523 10828435 - 102004973 AGCD01035218;GBDF01251958;XR_261926 MODEL 8734475 protein-coding Amhr2 anti-Mullerian hormone receptor type 2 ENCODES a protein that exhibits anti-Mullerian hormone receptor activity (ortholog); hormone binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); female gonad development (ortholog); male gonad development (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); dysgerminoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN plasma membrane (ortholog); serine/threonine protein kinase complex (ortholog) NW_004955458 693434 703026 + 102020884 AGCD01047148;GBDI01275831;XM_005397177;XM_013520957;XM_013520958;XM_013520959;XM_013520961;XM_013520962;XM_013520963;XM_013520964 XP_005397234;XP_013376411;XP_013376412;XP_013376413;XP_013376415;XP_013376416;XP_013376417;XP_013376418 MODEL 8868704 pseudo LOC102008654 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 pseudogene NW_004955516 2082890 2085194 + 102008654 AGCD01067447 MODEL 8734490 protein-coding Cfap57 cilia and flagella associated protein 57 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium organization (ortholog); single fertilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); male infertility (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) NW_004955537 2799965 2861411 + 102021277 AGCD01070938;AGCD01070939;GBDF01117921;XM_005410633;XM_005410634;XM_005410635;XM_013507773 XP_005410690;XP_005410691;XP_005410692;XP_013363227 MODEL 8775286 protein-coding Ergic2 ERGIC and golgi 2 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); craniolenticulosutural dysplasia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955505 5548588 5583503 + 102015131 AGCD01065152;GBDF01112264;XM_005407138;XM_005407139;XM_005407140;XM_013505937;XM_013505938 XP_005407195;XP_005407196;XP_005407197;XP_013361391;XP_013361392 MODEL 15036842 trna Trnastop-cua transfer RNA amber suppressor (anticodon CUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978848 39134238 misc_rna 7SK 7SK RNA 8974282 protein-coding Abcb6 ATP binding cassette subfamily B member 6 (LAN blood group) ENCODES a protein that exhibits ABC-type heme transporter activity (ortholog); ABC-type transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN brain development (ortholog); cellular detoxification of cadmium ion (ortholog); heme B biosynthetic process (ortholog); ASSOCIATED WITH acute intermittent porphyria (ortholog); acute myeloid leukemia (ortholog); acute porphyria (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955453 14215104 14222338 + 102019355 AGCD01044859;GBDF01049213;XM_005395577;XM_013519849 XP_005395634;XP_013375303 MODEL 8881476 protein-coding Ceacam20 CEA cell adhesion molecule 20 INVOLVED IN positive regulation of cytokine production (ortholog); response to bacterium (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Ehrlich tumor carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); microvillus membrane (ortholog) NW_004955555 1752634 1769148 - 102020294 AGCD01073099;AGCD01073100;GBDJ01022804;XM_013508670 XP_013364124 MODEL 39133964 misc_rna 7SK 7SK RNA 8905193 pseudo LOC102018416 uncharacterized LOC102018416 NW_004955427 9744289 9780161 - 102018416 AGCD01027104;XR_261251 MODEL 8809508 protein-coding Lrch2 leucine rich repeats and calponin homology domain containing 2 ASSOCIATED WITH cerebellar ataxia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955490 569526 678626 + 102026435 AGCD01060071;AGCD01060072;AGCD01060073;AGCD01060074;AGCD01060075;AGCD01060076;AGCD01060077;AGCD01060078;AGCD01060079;AGCD01060080;AGCD01060081;GBDF01306181;GBDJ01221232;XM_013504515 XP_013359969 MODEL 8818553 pseudo LOC102007145 zinc finger protein OZF-like NW_004955431 11381806 11382456 + 102007145 AGCD01030233 MODEL 8937977 protein-coding Adgra1 adhesion G protein-coupled receptor A1 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955477 10721635 10761357 + 102028188 AGCD01055706;GBDF01186692;XM_005402051;XM_005402052 XP_005402108;XP_005402109 MODEL 8978036 protein-coding Arfip1 ARF interacting protein 1 ENCODES a protein that exhibits phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); negative regulation of retrograde transport, endosome to Golgi (ortholog); regulation of protein secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955471 7238456 7349767 + 102027064 AGCD01053143;AGCD01053144;AGCD01053145;AGCD01053146;GBBH01141131;XM_005400902;XM_005400903;XM_005400905;XM_005400906 XP_005400959;XP_005400960;XP_005400962;XP_005400963 MODEL 8770373 protein-coding LOC102013433 ras-related protein Rab-7a-like NW_004955429 13690345 13691311 - 102013433 AGCD01028762;GBDI01000890;XM_013515500 XP_013370954 MODEL 39134096 misc_rna 7SK 7SK RNA 8714761 protein-coding LOC102014157 olfactory receptor 8H1-like NW_004955511 1057094 1058032 + 102014157 AGCD01066354;XM_013506419 XP_013361873 MODEL 10082678 protein-coding Cdc20 cell division cycle 20 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); histone deacetylase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); metaphase/anaphase transition of cell cycle (ortholog); metaphase/anaphase transition of meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); kinetochore (ortholog) NW_004955537 2941265 2945158 + 106146263 AGCD01070940;GBDF01008741;XM_013507747 XP_013363201 MODEL 8735729 pseudo LOC102009049 vascular endothelial zinc finger 1 pseudogene NW_004955476 8879444 8880316 - 102009049 AGCD01055375 MODEL 8912829 protein-coding Cyria CYFIP related Rac1 interactor A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955487 9545639 9636183 - 102013618 AGCD01059461;GBCE01085376;XM_005404447;XM_005404449;XM_013504374 XP_005404504;XP_005404506;XP_013359828 MODEL 9036868 protein-coding Atmin ATM interactor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); dynein complex binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN motile cilium assembly (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nuclear body (ortholog) NW_004955522 3829875 3835449 + 102007267 AGCD01068399;AGCD01068400;GBCE01045514;GBDF01048467;XM_013507104;XM_013507105 XP_013362558;XP_013362559 MODEL 9045170 protein-coding LOC102008284 protocadherin gamma-B7-like NW_004957427 6 1475 - 102008284 AGCD01080823;GBDF01178990;XM_005415230 XP_005415287 MODEL 39131748 rrna 5S_rRNA 5S ribosomal RNA 9050458 protein-coding LOC102010235 cytochrome P450 4X1 ENCODES a protein that exhibits anandamide 14,15 epoxidase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955464 11373217 11415433 - 102010235 AGCD01050149;AGCD01050150;AGCD01050151;AGCD01050152;AGCD01050153;GBDI01243736;XM_013521750;XM_013521751;XM_013521752;XR_001236710 XP_013377204;XP_013377205;XP_013377206 MODEL 8813619 protein-coding Wdr81 WD repeat domain 81 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN aggrephagy (ortholog); early endosome to late endosome transport (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); anxiety disorder (ortholog); aplastic anemia (ortholog); FOUND IN autophagosome membrane (ortholog); cytosol (ortholog); early endosome membrane (ortholog) NW_004955481 1450127 1462564 - 102016808 AGCD01056832;AGCD01056833;GBCE01008518;XM_005402608;XM_013503510;XM_013503511 XP_005402665;XP_013358964;XP_013358965 MODEL 8939253 protein-coding Aoah acyloxyacyl hydrolase ENCODES a protein that exhibits acyloxyacyl hydrolase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); lipopolysaccharide catabolic process (ortholog); lipopolysaccharide metabolic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular region (ortholog) NW_004955460 6750851 6954185 + 102029597 AGCD01048477;GBBH01082803;XM_013521273;XM_013521274;XM_013521275;XM_013521276 XP_013376727;XP_013376728;XP_013376729;XP_013376730 MODEL 39132158 rrna 5S_rRNA 5S ribosomal RNA 8788416 ncrna LOC102012223 uncharacterized LOC102012223 NW_004955506 891734 899069 - 102012223 AGCD01065239;AGCD01065240;GBBH01030954;XR_264313 MODEL 8912805 ncrna LOC102011005 uncharacterized LOC102011005 NW_004955418 27966614 27993848 - 102011005 AGCD01019421;AGCD01019422;GBDF01041994;XR_260587;XR_260588 MODEL 8790519 protein-coding Axl AXL receptor tyrosine kinase ENCODES a protein that exhibits myosin heavy chain binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); apoptotic cell clearance (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN Gas6 - Axl signaling axis; ASSOCIATED WITH amenorrhea (ortholog); Breast Cancer, Familial (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955555 189445 218509 + 102011151 AGCD01073024;GBDK01005488;XM_005412322;XM_005412323 XP_005412379;XP_005412380 MODEL 8857606 protein-coding LOC102013786 transmembrane protein 89-like NW_004958235 18 1012 + 102013786 AGCD01081631;GBDK01324497;XM_005415241 XP_005415298 MODEL 8904754 pseudo LOC102022501 olfactory receptor 1361-like NW_004955419 5358140 5359599 - 102022501 AGCD01019802 MODEL 8933502 protein-coding Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ENCODES a protein that exhibits 3'(2'),5'-bisphosphate nucleotidase activity (ortholog); 3',5'-nucleotide bisphosphate phosphatase activity (ortholog); 3'-nucleotidase activity (ortholog); INVOLVED IN chondrocyte development (ortholog); chondroitin sulfate proteoglycan metabolic process (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chondrodysplasia with joint dislocations gPAPP type (ortholog); esophageal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network membrane (ortholog) NW_004955454 15899820 15918222 - 102007970 AGCD01045497;AGCD01045498;GBDF01119202;GBDK01128450;XM_013520210;XM_013520211 XP_013375664;XP_013375665 MODEL 39134239 misc_rna 7SK 7SK RNA 8814145 protein-coding Il34 interleukin 34 ENCODES a protein that exhibits identical protein binding (ortholog); macrophage colony-stimulating factor receptor binding (ortholog); INVOLVED IN interleukin-34-mediated signaling pathway (ortholog); microglial cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955484 3362240 3429031 + 102005145 AGCD01058176;AGCD01058177;AGCD01058178;AGCD01058179;AGCD01058180;AGCD01058181;GBCE01095073;XM_005403487;XM_005403488;XM_005403492;XM_013503872;XM_013503873 XP_005403544;XP_005403545;XP_005403549;XP_013359326;XP_013359327 MODEL 8817072 protein-coding Rsu1 Ras suppressor protein 1 INVOLVED IN cell-matrix adhesion (ortholog); positive regulation of neural precursor cell proliferation (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chloracne (ortholog); FOUND IN focal adhesion (ortholog) NW_004955429 11043205 11234698 + 102029209 AGCD01028685;GBBH01187919;XM_005386967;XM_005386968;XR_261324 XP_005387024;XP_005387025 MODEL 9012658 protein-coding Ccdc124 coiled-coil domain containing 124 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); midbody (ortholog); plasma membrane (ortholog) NW_004955524 3349444 3355748 - 102016947 AGCD01068886;AGCD01068887;AGCD01068888;GBCQ01033885;XM_005409551 XP_005409608 MODEL 8871370 protein-coding Sowaha sosondowah ankyrin repeat domain family member A NW_004955408 4187724 4189059 + 102015929 AGCD01008091;GBCQ01088487;GBDI01055419;XM_005376574 XP_005376631 MODEL 8873551 protein-coding Slc39a14 solute carrier family 39 member 14 ENCODES a protein that exhibits cadmium ion transmembrane transporter activity (ortholog); ferrous iron transmembrane transporter activity (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to insulin stimulus (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congenital heart disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); early endosome membrane (ortholog) NW_004955403 45828247 45867309 + 102006304 AGCD01002837;AGCD01002838;GBCB01120359;XM_005373657;XM_013513817;XM_013513820;XM_013513823;XM_013513825;XM_013513828 XP_005373714;XP_013369271;XP_013369274;XP_013369277;XP_013369279;XP_013369282 MODEL 8942271 protein-coding Rec8 REC8 meiotic recombination protein INVOLVED IN double-strand break repair via homologous recombination (ortholog); fertilization (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH azoospermia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955409 36223783 36231749 - 102011511 AGCD01010453;GBCE01171312;XM_013510405;XM_013510406 XP_013365859;XP_013365860 MODEL 9058104 protein-coding Cdc20b cell division cycle 20B INVOLVED IN de novo centriole assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Triple Negative Breast Neoplasms (ortholog); triple-negative breast cancer (ortholog); FOUND IN deuterosome (ortholog) NW_004955446 12494176 12551397 + 102020391 AGCD01040235;AGCD01040236;AGCD01040237;GBDF01100721;XM_005392708;XM_013518457;XM_013518458 XP_005392765;XP_013373911;XP_013373912 MODEL 8974513 protein-coding Clic5 CLIC family member 5 ENCODES a protein that exhibits chloride channel activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); chloride transport (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 103 (ortholog); Hearing Loss (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955437 11053885 11118150 - 102029222 AGCD01034569;GBDK01016876;XM_005389839 XP_005389896 MODEL 8834295 protein-coding LOC102006032 ankyrin repeat and KH domain-containing protein 1 NW_004955418 134451 259259 - 102006032 AGCD01018668;AGCD01018669;AGCD01018670;GBDI01137461;XM_005382032;XM_005382034;XM_005382037;XM_013512890;XM_013512892;XM_013512893;XM_013512894;XM_013512895;XM_013512896;XM_013512897 XP_005382089;XP_005382091;XP_005382094;XP_013368344;XP_013368346;XP_013368347;XP_013368348;XP_013368349;XP_013368350;XP_013368351 MODEL 9042882 pseudo LOC102004247 ATP synthase subunit beta, mitochondrial-like NW_004955458 6124218 6126126 - 102004247 AGCD01047552 MODEL 9055647 ncrna LOC102010236 uncharacterized LOC102010236 NW_004955465 1021083 1041695 - 102010236 AGCD01050329;GBDF01287130;XR_263230 MODEL 8899859 protein-coding Dnah5 dynein axonemal heavy chain 5 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); autism spectrum disorder (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal dynein complex (ortholog) NW_004955426 3105631 3406587 - 102007676 AGCD01026065;AGCD01026066;AGCD01026067;AGCD01026068;AGCD01026069;AGCD01026070;AGCD01026071;AGCD01026072;AGCD01026073;AGCD01026074;AGCD01026075;AGCD01026076;AGCD01026077;AGCD01026078;AGCD01026079;AGCD01026080;GBDI01083953;XM_005386122;XM_013514981 XP_005386179;XP_013370435 MODEL 8946074 protein-coding Pls3 plastin 3 ENCODES a protein that exhibits structural constituent of presynaptic actin cytoskeleton (ortholog); INVOLVED IN bone development (ortholog); inner ear auditory receptor cell differentiation (ortholog); regulation of synaptic vesicle cycle (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Anterior Diaphragmatic Hernia (ortholog); Bone Fractures (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuromuscular junction (ortholog) NW_004955490 125913 221152 - 102024576 AGCD01060059;AGCD01060060;AGCD01060061;GBCE01031000;XM_005404619;XM_013504543 XP_005404676;XP_013359997 MODEL 8926674 protein-coding Prmt7 protein arginine methyltransferase 7 ENCODES a protein that exhibits histone binding (ortholog); histone H4 methyltransferase activity (ortholog); histone H4R3 methyltransferase activity (ortholog); INVOLVED IN genomic imprinting (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); brachydactyly (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8299427 8352465 - 102009842 AGCD01058374;AGCD01058375;AGCD01058376;XM_005403584;XM_013503916;XM_013503917 XP_005403641;XP_013359370;XP_013359371 MODEL 8738712 protein-coding Abcb7 ATP binding cassette subfamily B member 7 ENCODES a protein that exhibits ABC-type iron-sulfur cluster transporter activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); iron ion transmembrane transport (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster export pathway; ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); Dwarfism (ortholog); FOUND IN ATP-binding cassette (ABC) transporter complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955562 1079884 1220806 - 102025401 AGCD01073961;AGCD01073962;AGCD01073963;AGCD01073964;AGCD01073965;AGCD01073966;AGCD01073967;GBCB01058565;XM_005413086 XP_005413143 MODEL 8843816 protein-coding LOC102011853 uncharacterized LOC102011853 NW_004955466 8078031 8135745 + 102011853 AGCD01050979;GBDJ01302620;XM_005399163;XM_005399164;XM_013521878 XP_005399220;XP_005399221;XP_013377332 MODEL 8909713 protein-coding LOC102013434 uncharacterized LOC102013434 NW_004955430 2174725 2183009 + 102013434 AGCD01029156;GBDK01214826;XM_005387309 XP_005387366 MODEL 9050654 protein-coding LOC102022507 acyl carrier protein, mitochondrial NW_004955493 2134657 2139543 - 102022507 AGCD01060927;GBCC01013347;GBCE01030161;XM_013504895 XP_013360349 MODEL 8872834 protein-coding Adgra2 adhesion G protein-coupled receptor A2 INVOLVED IN angiogenesis (ortholog); canonical Wnt signaling pathway (ortholog); central nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); Wnt signalosome (ortholog) NW_004955463 13514065 13549806 + 102011097 AGCD01049870;AGCD01049871;GBCE01052141;GBCQ01177598;XM_005398475 XP_005398532 MODEL 8732721 protein-coding LOC102003190 class I histocompatibility antigen, B alpha chain-like NW_004955583 377680 382207 + 102003190 AGCD01075815;AGCD01075816;GBCE01000219;GBDK01001528;XM_013509791 XP_013365245 MODEL 8787014 ncrna LOC102007524 uncharacterized LOC102007524 NW_004955462 7283476 7285145 - 102007524 AGCD01049299;GBDF01181580;XR_263102 MODEL 9026784 pseudo LOC102004974 ras-related protein Rab-5A pseudogene NW_004955438 15450726 15451498 + 102004974 AGCD01035367 MODEL 8704236 protein-coding LOC102004604 olfactory receptor 1N1-like NW_004955419 5180021 5180950 - 102004604 AGCD01019787;XM_013513100 XP_013368554 MODEL 8791757 ncrna LOC102008655 uncharacterized LOC102008655 NW_004955434 11901814 11906490 - 102008655 AGCD01032382;GBDF01223017;XR_001234777 MODEL 8811122 protein-coding Atn1 atrophin 1 ENCODES a protein that exhibits JUN kinase binding (ortholog); protein domain specific binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cell killing (ortholog); cell migration (ortholog); determination of adult lifespan (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Cafe-au-Lait Spots (ortholog); Congenital Hypotonia, Epilepsy, Developmental Delay, and Digital Anomalies (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955413 4511251 4524037 + 102007876 AGCD01013621;GBDF01044615;XM_005378844 XP_005378901 MODEL 8985084 protein-coding Lrch3 leucine rich repeats and calponin homology domain containing 3 INVOLVED IN septin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog) NW_004955420 11998567 12086872 - 102027530 AGCD01020849;AGCD01020850;AGCD01020851;GBDI01011641;XM_005383084;XM_005383085;XM_005383086;XM_005383087;XM_005383088;XM_005383089;XM_013513362;XR_001233690 XP_005383141;XP_005383142;XP_005383143;XP_005383144;XP_005383145;XP_005383146;XP_013368816 MODEL 8883340 protein-coding Acp5 acid phosphatase 5, tartrate resistant ENCODES a protein that exhibits acid phosphatase activity (ortholog); ferric iron binding (ortholog); ferrous iron binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); bone resorption (ortholog); cellular response to zinc ion starvation (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); autoimmune hemolytic anemia (ortholog); brain disease (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) NW_004955495 2418113 2421181 + 102026992 AGCD01061772;GBCB01039042;GBDI01008532;XM_013505121 XP_013360575 MODEL 8811523 protein-coding Cfap58 cilia and flagella associated protein 58 INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN centrosome (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955485 6208412 6319367 - 102021881 AGCD01058609;AGCD01058610;AGCD01058611;AGCD01058612;AGCD01058613;AGCD01058614;GBDI01366374;XM_005403772;XM_013504126 XP_005403829;XP_013359580 MODEL 15036846 trna Trnastop-uca transfer RNA opal suppressor (anticodon UCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978847 39131749 rrna 5S_rRNA 5S ribosomal RNA 39131475 protein-coding C3orf85 chromosome 3 open reading frame 85 8743231 protein-coding Ahsa2 Putative activator of 90 kDa heat shock protein ATPase homolog 2 NW_004955424 22688824 22700820 - 102022944 AGCD01024979;GBCE01054756;GBDF01082227;XM_005385742;XM_013514605;XM_013514606;XM_013514607 XP_005385799;XP_013370059;XP_013370060;XP_013370061 MODEL 8811747 protein-coding Aoc1 amine oxidase copper containing 1 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); diamine oxidase activity (ortholog); INVOLVED IN putrescine metabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN bicellular tight junction (ortholog); extracellular exosome (ortholog); extracellular region (ortholog) NW_004955491 5316482 5326262 + 102026986 AGCD01060477;AGCD01060478;GBCQ01033148;XM_005404798;XM_013504575 XP_005404855;XP_013360029 MODEL 39133965 misc_rna 7SK 7SK RNA 8951649 protein-coding Cebpa CCAAT enhancer binding protein alpha ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Acute-Phase Reaction (ortholog); FOUND IN C/EBP complex (ortholog); CHOP-C/EBP complex (ortholog); nuclear matrix (ortholog) NW_004955468 3046544 3049217 - 102019379 AGCD01051849;AGCD01051850;GBBH01092640;XM_013522540 XP_013377994 MODEL 8719443 pseudo LOC102018418 putative ATP-dependent RNA helicase Pl10 NW_004955427 10783970 10784631 + 102018418 AGCD01027157 MODEL 8728929 ncrna LOC102009823 uncharacterized LOC102009823 NW_004955468 7108012 7122808 + 102009823 AGCD01051995;AGCD01051996;GBDF01128606;XR_001236944;XR_001236945;XR_263399;XR_263400;XR_263401 MODEL 8771908 protein-coding Sgtb small glutamine rich tetratricopeptide repeat co-chaperone beta ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN protein heterooligomerization (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955446 3374363 3426284 + 102018871 AGCD01040011;AGCD01040012;AGCD01040013;AGCD01040014;AGCD01040015;GBDF01157752;XM_005392623;XM_005392624 XP_005392680;XP_005392681 MODEL 8742100 pseudo LOC102009053 ribosome biogenesis protein BRX1 homolog pseudogene NW_004955416 27989601 28018980 - 102009053 AGCD01017623;XM_005381644;XR_260424;XR_260425;XR_260426;XR_260427;XR_260428 MODEL 8950412 protein-coding Fkbp15 FKBP prolyl isomerase family member 15 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955419 14264488 14329890 + 102026641 AGCD01020015;AGCD01020016;GBDF01191885;XM_005382688;XM_005382689 XP_005382745;XP_005382746 MODEL 9026321 protein-coding Abcb8 ATP binding cassette subfamily B member 8 ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN cell volume homeostasis (ortholog); mitochondrial potassium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN mitochondrial ATP-gated potassium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955491 5468855 5485568 + 102028644 AGCD01060484;GBCE01116645;XM_005404804;XM_005404805;XM_013504582 XP_005404861;XP_005404862;XP_013360036 MODEL 9008476 protein-coding Slc39a2 solute carrier family 39 member 2 ENCODES a protein that exhibits metal ion transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cadmium ion transmembrane transport (ortholog); keratinocyte differentiation (ortholog); zinc ion transmembrane transport (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955550 1762905 1765254 + 102029800 AGCD01072587;GBCC01045952;XM_005412076;XM_005412077 XP_005412133;XP_005412134 MODEL 8850755 protein-coding Ergic3 ERGIC and golgi 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Developmental Disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955422 25884138 25893237 - 102010597 AGCD01023269;GBDF01008497;XM_005384790;XM_005384791 XP_005384847;XP_005384848 MODEL 8885489 ncrna LOC102008287 uncharacterized LOC102008287 NW_004955406 43139560 43143818 + 102008287 AGCD01006726;GBDF01122753;XR_259542 MODEL 9039430 protein-coding Amigo1 adhesion molecule with Ig like domain 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN axonal fasciculation (ortholog); axonogenesis (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); neuronal cell body membrane (ortholog) NW_004955435 12918270 12930362 - 102004746 AGCD01033174;GBDF01055408;GBDI01386202;XM_005388875;XM_005388878 XP_005388932;XP_005388935 MODEL 39131887 rrna 5S_rRNA 5S ribosomal RNA 8779211 ncrna LOC102012226 uncharacterized LOC102012226 NW_004955511 1865704 1875638 + 102012226 AGCD01066381;AGCD01066382;GBDF01188738;XR_264414 MODEL 8865526 protein-coding LOC102007148 putative spermatogenesis-associated protein 31D4 NW_004955434 10580926 10593113 + 102007148 AGCD01032355;GBDF01001033;XM_005388673 XP_005388730 MODEL 8906253 protein-coding Azgp1 alpha-2-glycoprotein 1, zinc-binding INVOLVED IN cell adhesion (ortholog); cellular response to insulin stimulus (ortholog); cellular response to magnesium ion (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Cachexia (ortholog); FOUND IN extracellular region (ortholog) NW_004955573 902153 910481 - 102005193 AGCD01075007;GBCQ01093722;XM_005413762;XM_013509496 XP_005413819;XP_013364950 MODEL 8788402 protein-coding LOC102010238 olfactory receptor 151 NW_004955412 25594862 25595791 + 102010238 AGCD01013161;XM_005378427 XP_005378484 MODEL 39131374 protein-coding IL36G interleukin 36 gamma 8739765 protein-coding Arfip2 ARF interacting protein 2 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); identical protein binding (ortholog); membrane curvature sensor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); mitophagy (ortholog); protein localization to phagophore assembly site (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955414 22209515 22214353 - 102023461 AGCD01015449;GBDI01078369;XM_005380149;XM_005380151;XM_013511831 XP_005380206;XP_005380208;XP_013367285 MODEL 8917790 protein-coding Bptf bromodomain PHD finger transcription factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN histone modification pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); Alzheimer's disease (ortholog); FOUND IN ATPase complex (ortholog); cell body (ortholog); chromatin (ortholog) NW_004955478 6990816 7088751 + 102026861 AGCD01055938;AGCD01055939;AGCD01055940;AGCD01055941;GBBH01089810;GBCQ01152099;XM_013503185;XM_013503186;XM_013503187;XM_013503188;XM_013503189;XM_013503190;XM_013503191;XM_013503192;XM_013503193;XM_013503194;XM_013503195 XP_013358639;XP_013358640;XP_013358641;XP_013358642;XP_013358643;XP_013358644;XP_013358645;XP_013358646;XP_013358647;XP_013358648;XP_013358649 MODEL 8709926 protein-coding LOC102014160 zinc finger protein 709-like NW_004955432 4036003 4057987 - 102014160 AGCD01030688;AGCD01030689;GBDI01208211;XM_013515926 XP_013371380 MODEL 8727936 protein-coding Prmt8 protein arginine methyltransferase 8 ENCODES a protein that exhibits enzyme binding (ortholog); histone H4 methyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of modification of postsynaptic actin cytoskeleton (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955413 1323436 1409188 + 102025449 AGCD01013520;AGCD01013521;GBDF01034290;XM_005378717 XP_005378774 MODEL 8803226 protein-coding Rtbdn retbindin ENCODES a protein that exhibits riboflavin binding (ortholog); ASSOCIATED WITH Ependymomas (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); interphotoreceptor matrix (ortholog); plasma membrane (ortholog) NW_004955415 31895446 31899927 - 102023350 AGCD01016700;GBDF01121247;XM_005381033 XP_005381090 MODEL 8838810 ncrna LOC102003191 uncharacterized LOC102003191 NW_004955402 40910787 40919051 - 102003191 AGCD01001005;GBDF01110513;XR_259082 MODEL 8887928 pseudo LOC102007526 actin-related protein 10 pseudogene NW_004955463 6222350 6224556 + 102007526 AGCD01049659 MODEL 8943864 protein-coding Wdr82 WD repeat domain 82 ENCODES a protein that exhibits chromatin binding (ortholog); lncRNA binding (ortholog); INVOLVED IN gene expression (ortholog); lncRNA catabolic process (ortholog); negative regulation of DNA-templated transcription, elongation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955532 3860785 3880714 - 102027900 AGCD01070302;GBDK01090445;XM_005410348 XP_005410405 MODEL 15036845 trna Trnastop-uua transfer RNA ochre suppressor(anticodon UUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978849 39131750 rrna 5S_rRNA 5S ribosomal RNA 8771502 protein-coding Lrch4 leucine rich repeats and calponin homology domain containing 4 INVOLVED IN membrane raft assembly (ortholog); positive regulation of toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); PML body (ortholog) NW_004955573 315764 327833 + 102019449 AGCD01074974;GBDF01131942;XM_005413713;XM_005413714 XP_005413770;XP_005413771 MODEL 8823716 protein-coding Clic6 chloride intracellular channel 6 ENCODES a protein that exhibits chloride channel activity (ortholog); D2 dopamine receptor binding (ortholog); D3 dopamine receptor binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); myoepithelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955407 34002656 34042524 + 102029048 AGCD01007716;AGCD01007717;GBDJ01314587;XM_013504459;XM_013504463;XM_013504469;XM_013504472 XP_013359913;XP_013359917;XP_013359923;XP_013359926 MODEL 39134097 misc_rna 7SK 7SK RNA 39133966 misc_rna 7SK 7SK RNA 8710848 protein-coding C4bpa complement component 4 binding protein alpha INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal vesicle (ortholog); cell body (ortholog) NW_004955406 42613659 42641918 + 102028495 AGCD01006712;AGCD01006713;GBDI01193239;XM_005375423;XM_013502872;XM_013502874 XP_005375480;XP_013358326;XP_013358328 MODEL 8722856 protein-coding LOC102018423 vomeronasal type-1 receptor 90-like NW_004955429 12408891 12409616 + 102018423 AGCD01028715;XM_005387249 XP_005387306 MODEL 8867331 protein-coding Plscr1 phospholipid scramblase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); CD4 receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acute-phase response (ortholog); apoptotic process (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955474 10953381 10989100 + 102017977 AGCD01054604;AGCD01054605;GBCQ01123186;XM_005401430;XM_005401431;XM_005401432;XM_013502784 XP_005401487;XP_005401488;XP_005401489;XP_013358238 MODEL 8735694 ncrna LOC102007156 uncharacterized LOC102007156 NW_004955440 17575869 17579753 - 102007156 AGCD01036575;GBDF01304834;XR_262035 MODEL 9015187 protein-coding LOC102013435 endogenous retrovirus group K member 18 Pol protein-like NW_004955511 4811817 4815683 + 102013435 AGCD01066527;XM_013506412 XP_013361866 MODEL 8812103 protein-coding Sowahb sosondowah ankyrin repeat domain family member B NW_004955433 1537658 1541574 - 102015040 AGCD01031361;GBDI01052984;XM_005388187 XP_005388244 MODEL 8969573 protein-coding Ccdc125 coiled-coil domain containing 125 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of cell motility (ortholog); negative regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955575 15727 50076 - 102019217 AGCD01075194;AGCD01075195;AGCD01075196;AGCD01075197;GBDJ01273825;XM_005413896;XM_005413902;XM_005413903;XM_013509587;XM_013509588;XM_013509589;XM_013509590;XM_013509591;XM_013509594;XM_013509595;XM_013509596;XM_013509597 XP_005413953;XP_005413959;XP_005413960;XP_013365041;XP_013365042;XP_013365043;XP_013365044;XP_013365045;XP_013365048;XP_013365049;XP_013365050;XP_013365051 MODEL 8785322 protein-coding LOC102022508 zinc finger protein 426-like NW_004955495 1108859 1135681 - 102022508 AGCD01061673;GBDK01293405;XM_013505074;XM_013505075;XM_013505076 XP_013360528;XP_013360529;XP_013360530 MODEL 8836911 ncrna LOC102014161 uncharacterized LOC102014161 NW_004955514 3250257 3253611 + 102014161 AGCD01067093;GBDF01074600;XR_264505 MODEL 8790230 protein-coding Adgra3 adhesion G protein-coupled receptor A3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955480 2322783 2408241 + 102027747 AGCD01056611;GBCE01153498;XM_005402467 XP_005402524 MODEL 9060726 protein-coding LOC102009054 uncharacterized LOC102009054 NW_004955416 11049189 11057164 - 102009054 AGCD01017171;AGCD01017172;GBDF01186388;XM_005381692 XP_005381749 MODEL 8877719 protein-coding Cdc23 cell division cycle 23 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); mitotic cell cycle (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955418 2194937 2221928 + 102004163 AGCD01018751;AGCD01018752;AGCD01018753;GBDF01124966;XM_005382120;XM_005382121;XM_005382122 XP_005382177;XP_005382178;XP_005382179 MODEL 8828788 protein-coding LOC102011006 olfactory receptor 2T11 NW_004955418 30157574 30163444 - 102011006 AGCD01019506;XM_005382367 XP_005382424 MODEL 8785016 protein-coding Reck reversion inducing cysteine rich protein with kazal motifs ENCODES a protein that exhibits coreceptor activity (ortholog); endopeptidase inhibitor activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN blood vessel maturation (ortholog); canonical Wnt signaling pathway (ortholog); embryo implantation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog); plasma membrane raft (ortholog); Wnt signalosome (ortholog) NW_004955472 222261 276869 - 102008717 AGCD01053322;AGCD01053323;GBCE01055236;GBDJ01311384;XM_013523013 XP_013378467 MODEL 8808127 protein-coding Atoh1 atonal bHLH transcription factor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN auditory receptor cell fate determination (ortholog); auditory receptor cell fate specification (ortholog); axon guidance (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 89 (ortholog); Hearing Loss (ortholog); FOUND IN nucleus (ortholog) NW_004955405 4461704 4462756 + 102011079 AGCD01004646;XM_005374258 XP_005374315 MODEL 8755389 pseudo LOC102004250 nucleophosmin pseudogene NW_004955409 17023845 17033338 - 102004250 AGCD01009756;AGCD01009757;AGCD01009758;XM_005377160 MODEL 9038632 protein-coding Abcb9 ATP binding cassette subfamily B member 9 ENCODES a protein that exhibits ABC-type oligopeptide transporter activity (ortholog); ABC-type peptide transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); peptide metabolic process (ortholog); peptide transport (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955482 5817334 5838642 + 102024229 AGCD01057349;AGCD01057350;GBBH01183746;GBDF01306028;XM_005403060;XM_013503662;XM_013503663 XP_005403117;XP_013359116;XP_013359117 MODEL 39134240 misc_rna 7SK 7SK RNA 8977115 protein-coding Cfap61 cilia and flagella associated protein 61 INVOLVED IN flagellated sperm motility (ortholog); sperm flagellum assembly (ortholog); sperm mitochondrial sheath assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axoneme (ortholog); manchette (ortholog); radial spoke stalk (ortholog) NW_004955415 28171364 28389356 + 102021436 AGCD01016638;AGCD01016639;AGCD01016640;GBDF01048452;XM_013512185;XM_013512186;XM_013512187;XM_013512188 XP_013367639;XP_013367640;XP_013367641;XP_013367642 MODEL 8800190 protein-coding Erh ERH mRNA splicing and mitosis factor ENCODES a protein that exhibits methyl-CpG binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); sarcoma (ortholog); FOUND IN methylosome (ortholog); midbody (ortholog); nucleus (ortholog) NW_004955466 960245 976449 + 102027958 AGCD01050685;AGCD01050686;GBBH01031291;XM_005399034 XP_005399091 MODEL 9036680 protein-coding Aopep aminopeptidase O (putative) ASSOCIATED WITH atrial fibrillation (ortholog); breast cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955422 21680488 22020935 + 102004493 AGCD01023138;AGCD01023139;AGCD01023140;AGCD01023141;AGCD01023142;AGCD01023143;AGCD01023144;AGCD01023145;GBDF01016215;XM_013513835 XP_013369289 MODEL 8960428 protein-coding Dnah6 dynein axonemal heavy chain 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955424 2575333 2788742 - 102008433 AGCD01024293;AGCD01024294;AGCD01024295;AGCD01024296;AGCD01024297;GBDJ01350396;XM_005385447 XP_005385504 MODEL 8756104 protein-coding Cyrib CYFIP related Rac1 interactor B ENCODES a protein that exhibits MHC class Ib protein binding, via antigen binding groove (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to molecule of bacterial origin (ortholog); negative regulation of actin filament polymerization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cilium (ortholog); mitochondrion (ortholog) NW_004955461 4634324 4786723 - 102006550 AGCD01048870;AGCD01048871;AGCD01048872;AGCD01048873;AGCD01048874;AGCD01048875;GBDI01133387;XM_005397991;XM_005397992;XM_005397993;XM_013521325;XM_013521326 XP_005398048;XP_005398049;XP_005398050;XP_013376779;XP_013376780 MODEL 8817821 protein-coding Ahsg alpha 2-HS glycoprotein ENCODES a protein that exhibits receptor signaling protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); alopecia-mental retardation syndrome 1 (ortholog); calcinosis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955420 21071111 21078397 - 102004073 AGCD01021122;GBDK01362043;XM_005383274 XP_005383331 MODEL 8750703 protein-coding Azi2 5-azacytidine induced 2 INVOLVED IN dendritic cell differentiation (ortholog); dendritic cell proliferation (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955430 19802106 19829566 - 102019095 AGCD01029724;GBCQ01066750;GBDI01134580;XM_005387509;XM_005387510;XM_013515642 XP_005387566;XP_005387567;XP_013371096 MODEL 8749048 protein-coding Sh2b1 SH2B adaptor protein 1 INVOLVED IN cell motility (ortholog); lamellipodium assembly (ortholog); positive regulation of mitotic nuclear division (ortholog); PARTICIPATES IN leptin system pathway; ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955493 6583415 6592690 - 102014577 AGCD01061119;GBBH01065760;XM_005405163;XM_013504844;XM_013504845;XM_013504846;XM_013504847;XM_013504848;XM_013504849 XP_005405220;XP_013360298;XP_013360299;XP_013360300;XP_013360301;XP_013360302;XP_013360303 MODEL 8752185 protein-coding Aox1 aldehyde oxidase 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); aldehyde oxidase activity (ortholog); aryl-aldehyde oxidase activity (ortholog); INVOLVED IN NAD+ catabolic process (ortholog); positive regulation of nitric oxide biosynthetic process (ortholog); retinoic acid biosynthetic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955403 827538 875856 - 102005540 AGCD01001708;AGCD01001709;GBCC01021803;XM_005373246 XP_005373303 MODEL 8800749 protein-coding Braf B-Raf proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); MAP kinase kinase activity (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; colorectal cancer pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); amblyopia (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955494 2567238 2712708 + 102018105 AGCD01061441;AGCD01061442;AGCD01061443;AGCD01061444;AGCD01061445;AGCD01061446;AGCD01061447;AGCD01061448;GBDF01011297;GBDF01011303;XM_005405413;XM_005405415;XM_005405418;XM_005405419;XM_013504993;XM_013504994;XM_013504995;XM_013504996;XM_013504997;XR_001231320;XR_001231321 XP_005405470;XP_005405472;XP_005405475;XP_005405476;XP_013360447;XP_013360448;XP_013360449;XP_013360450;XP_013360451 MODEL 8920470 protein-coding Fkbp1a FKBP prolyl isomerase 1A ENCODES a protein that exhibits activin receptor binding (ortholog); calcium channel regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cytokine-mediated signaling pathway (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Barth syndrome (ortholog); congenital heart disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955596 580106 606210 - 102014630 AGCD01076523;AGCD01076524;GBCB01000555;XM_005414705;XM_005414706;XM_013510019;XM_013510020 XP_005414762;XP_005414763;XP_013365473;XP_013365474 MODEL 9024185 protein-coding LOC102013790 uncharacterized LOC102013790 NW_004955452 5607257 5611877 - 102013790 AGCD01044050;GBCQ01082703;XM_013519664 XP_013375118 MODEL 8814980 ncrna LOC102007527 uncharacterized LOC102007527 NW_004955465 7812882 7828643 - 102007527 AGCD01050469;GBDF01276911;XR_263251 MODEL 8931996 pseudo LOC102012227 DNA/RNA-binding protein KIN17 pseudogene NW_004955511 978926 980086 + 102012227 AGCD01066350 MODEL 9045935 ncrna LOC102009827 uncharacterized LOC102009827 NW_004955414 26483702 26488503 - 102009827 AGCD01015645;GBCB01079189;XR_260198 MODEL 8921319 protein-coding LOC102011861 vomeronasal type-1 receptor 90-like NW_004955414 14978145 14979125 - 102011861 AGCD01015166;XM_005380440 XP_005380497 MODEL 8714450 trna Trnat-agu transfer RNA threonine (anticodon AGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978810 AGCD01035275;AGCD01037196;AGCD01050588;AGCD01050597;AGCD01051466;AGCD01051472;AGCD01051842;AGCD01057606;AGCD01071886 MODEL 10336166 protein-coding Cebpb CCAAT enhancer binding protein beta ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN forkhead class A signaling pathway; interleukin-3 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); Bacteremia (ortholog); FOUND IN C/EBP complex (ortholog); CHOP-C/EBP complex (ortholog); chromatin (ortholog) NW_004955445 8060432 8061289 - 106149433 AGCD01039557;GBCE01052265;GBDF01277539;XM_013518359 XP_013373813 MODEL 8942983 pseudo LOC102010239 mortality factor 4-like protein 1 pseudogene NW_004955412 28163408 28164375 + 102010239 AGCD01013249 MODEL 8709568 protein-coding C4bpb complement component 4 binding protein beta INVOLVED IN negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); regulation of opsonization (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 42601164 42608912 + 102024876 AGCD01006712;GBDF01118429;XM_005375411 XP_005375468 MODEL 8743547 protein-coding LOC102008662 uncharacterized LOC102008662 NW_004955538 2203100 2223177 - 102008662 AGCD01071109;GBDK01307063;XM_013507815;XM_013507816;XM_013507817 XP_013363269;XP_013363270;XP_013363271 MODEL 8949291 protein-coding Arfrp1 ADP ribosylation factor related protein 1 INVOLVED IN gastrulation (ortholog); Golgi to plasma membrane protein transport (ortholog); protein localization to Golgi apparatus (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); neuronal ceroid lipofuscinosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); trans-Golgi network (ortholog) NW_004955528 519887 529012 + 102005171 AGCD01069537;GBDF01118263;XM_005409945 XP_005410002 MODEL 8830520 protein-coding LOC102004605 histone H2A type 1 NW_004955483 970650 971254 - 102004605 AGCD01057638;GBDF01049962;XM_013503794 XP_013359248 MODEL 8789865 protein-coding Prmt9 protein arginine methyltransferase 9 ENCODES a protein that exhibits protein-arginine N-methyltransferase activity (ortholog); protein-arginine omega-N symmetric methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); clubfoot (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog) NW_004955428 3215335 3243569 - 102012456 AGCD01027650;GBDF01251549;XM_005386669 XP_005386726 MODEL 8734909 protein-coding LOC102007157 hemoglobin subunit alpha-3-like NW_004955442 17010737 17011588 - 102007157 AGCD01037931;GBDI01342197;XM_005391673 XP_005391730 MODEL 9042525 protein-coding Acp6 acid phosphatase 6, lysophosphatidic ENCODES a protein that exhibits lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); lysobisphosphatidic acid metabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955568 744453 764402 + 102012696 AGCD01074525;GBDK01361894;XM_005413458;XM_005413459 XP_005413515;XP_005413516 MODEL 8793566 protein-coding Slc39a3 solute carrier family 39 member 3 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); embryonic cranial skeleton morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN apical plasma membrane (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); plasma membrane (ortholog) NW_004955899 808 9721 + 102023969 AGCD01078617;GBDF01044519;XM_005415143 XP_005415200 MODEL 8937024 protein-coding Ccdc126 coiled-coil domain containing 126 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955410 25827309 25857028 + 102015614 AGCD01011177;AGCD01011178;AGCD01011179;GBDF01043959;XM_005377402;XM_005377404;XM_005377405;XM_013510697;XM_013510698;XR_001232773 XP_005377459;XP_005377461;XP_005377462;XP_013366151;XP_013366152 MODEL 9007009 protein-coding LOC102008288 keratin-associated protein 20-2-like NW_004955407 30178341 30178529 + 102008288 AGCD01007628;XM_005375644 XP_005375701 MODEL 9017909 pseudo LOC102003193 proliferation-associated protein 2G4 pseudogene NW_004955450 4817696 4818898 + 102003193 AGCD01042479;AGCD01042480 MODEL 39131888 rrna 5S_rRNA 5S ribosomal RNA 8711469 protein-coding Adgrb1 adhesion G protein-coupled receptor B1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); lipopolysaccharide binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); defense response to Gram-negative bacterium (ortholog); engulfment of apoptotic cell (ortholog); ASSOCIATED WITH astigmatism (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN dendrite (ortholog); extracellular region (ortholog); focal adhesion (ortholog) NW_004955454 1250261 1313547 + 102017627 AGCD01044967;AGCD01044968;GBBH01028741;XM_013520249 XP_013375703 MODEL 39131751 rrna 5S_rRNA 5S ribosomal RNA 8735629 protein-coding Cdc25a cell division cycle 25A ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); G2/M transition of mitotic cell cycle (ortholog); positive regulation of cholangiocyte proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive polycystic kidney disease (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955420 24345002 24361802 + 102004937 AGCD01021298;GBCQ01151056;GBDJ01420570;XM_013513611;XM_013513612;XM_013513613;XM_013513614;XM_013513616;XM_013513617;XM_013513618 XP_013369065;XP_013369066;XP_013369067;XP_013369068;XP_013369070;XP_013369071;XP_013369072 MODEL 8893289 protein-coding Atoh7 atonal bHLH transcription factor 7 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN circadian rhythm (ortholog); entrainment of circadian clock (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH Foveal Hypoplasia (ortholog); Persistent Hyperplastic Primary Vitreous, Autosomal Recessive (ortholog); FOUND IN axon (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955425 20559466 20560275 - 102022722 AGCD01025740;GBCQ01086737;XM_005386097 XP_005386154 MODEL 9060478 protein-coding Abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type vitamin B12 transporter activity (ortholog); INVOLVED IN amygdala development (ortholog); amyloid-beta clearance (ortholog); amyloid-beta metabolic process (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955442 729322 858826 + 102027792 AGCD01037429;GBDF01153989;XM_005391080 XP_005391137 MODEL 8880699 protein-coding Clint1 clathrin interactor 1 ENCODES a protein that exhibits clathrin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); Golgi apparatus (ortholog) NW_004955408 11904030 11963611 - 102018061 AGCD01008320;GBCC01021736;XM_005376244;XM_013508832 XP_005376301;XP_013364286 MODEL 39134098 misc_rna 7SK 7SK RNA 8797503 protein-coding Eri1 exoribonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); exoribonuclease II activity (ortholog); histone pre-mRNA stem-loop binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); maturation of 5.8S rRNA (ortholog); rRNA 3'-end processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH amenorrhea (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); histone pre-mRNA 3'end processing complex (ortholog); nucleolus (ortholog) NW_004955463 5074921 5104341 + 102006224 AGCD01049629;AGCD01049630;AGCD01049631;AGCD01049632;GBBH01198207;XM_013521560 XP_013377014 MODEL 8916529 protein-coding Il36r interleukin 36 receptor INVOLVED IN adaptive immune response (ortholog); cytokine-mediated signaling pathway (ortholog); digestive tract development (ortholog); ASSOCIATED WITH aortic dissection (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955470 7703369 7742058 + 102030184 AGCD01052803;AGCD01052804;GBDI01346727;XM_013522820;XM_013522821;XM_013522822 XP_013378274;XP_013378275;XP_013378276 MODEL 8812200 pseudo LOC102018424 interferon-related developmental regulator 1 pseudogene NW_004955431 7302705 7305140 - 102018424 AGCD01030084;XR_261460 MODEL 8919493 pseudo LOC102004978 DNA-directed RNA polymerases I, II, and III subunit RPABC4 pseudogene NW_004955547 2461150 2462490 - 102004978 AGCD01072282 MODEL 8938044 ncrna LOC102006033 uncharacterized LOC102006033 NW_004955481 9531180 9539647 + 102006033 AGCD01057102;GBDF01031476;XR_263796 MODEL 8882660 protein-coding Rtca RNA 3'-terminal phosphate cyclase ENCODES a protein that exhibits RNA-3'-phosphate cyclase activity (ortholog); INVOLVED IN negative regulation of optical nerve axon regeneration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955435 5019654 5041611 + 102005077 AGCD01032871;AGCD01032872;AGCD01032873;GBBH01092988;XM_005388796 XP_005388853 MODEL 8796878 ncrna LOC102013440 uncharacterized LOC102013440 NW_004955514 2930944 2934018 - 102013440 AGCD01067090;GBDF01225338;XR_264504 MODEL 8725692 protein-coding Dnah7 dynein axonemal heavy chain 7 INVOLVED IN cilium movement (ortholog); inner dynein arm assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN cilium (ortholog); inner dynein arm (ortholog); sperm annulus (ortholog) NW_004955403 4189887 4426405 + 102020073 AGCD01001780;AGCD01001781;AGCD01001782;AGCD01001783;AGCD01001784;AGCD01001785;AGCD01001786;GBBH01004459;XM_005373280;XR_001233192 XP_005373337 MODEL 8706693 protein-coding Plscr3 phospholipid scramblase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); lead ion binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to lipopolysaccharide (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); obesity (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955467 9534462 9539738 + 102016998 AGCD01051516;GBDI01305134;XM_005399507;XM_013522122 XP_005399564;XP_013377576 MODEL 8727354 protein-coding Sowahc sosondowah ankyrin repeat domain family member C FOUND IN sperm annulus (ortholog); sperm flagellum (ortholog) NW_004955470 12699007 12702332 + 102007004 AGCD01052937;GBDF01250483;GBDK01218176;XM_013522810 XP_013378264 MODEL 8878986 pseudo LOC102022509 guanylate-binding protein 4-like NW_004955423 4993794 5018433 - 102022509 AGCD01023551 MODEL 9029485 protein-coding Amigo2 adhesion molecule with Ig like domain 2 INVOLVED IN cerebellum development (ortholog); heterophilic cell-cell adhesion (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); gastric adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955500 6134736 6138075 - 102013948 AGCD01063871;GBDF01253270;GBDK01142053;XM_005406602 XP_005406659 MODEL 8792405 pseudo LOC102009055 60S ribosomal protein L24 pseudogene NW_004955481 3914939 3917042 - 102009055 AGCD01056922 MODEL 8981400 protein-coding Brap BRCA1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); protein sequestering activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN MAPK cascade (ortholog); negative regulation of signal transduction (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); ubiquitin ligase complex (ortholog) NW_004955482 8254709 8282416 - 102029515 AGCD01057515;GBDF01246857;XM_005403172 XP_005403229 MODEL 8755528 protein-coding LOC102011010 steroid 17-alpha-hydroxylase/17,20 lyase ENCODES a protein that exhibits heme binding (ortholog); steroid 17-alpha-monooxygenase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); androgen biosynthetic process (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH 17,20-Lyase Deficiency, Isolated (ortholog); amenorrhea (ortholog); breast cancer (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); endoplasmic reticulum (ortholog) NW_004955485 7615132 7652899 + 102011010 AGCD01058665;AGCD01058666;AGCD01058667;AGCD01058668;AGCD01058669;GBDF01163210;XM_005403822 XP_005403879 MODEL 8862512 protein-coding Wdr83 WD repeat domain 83 INVOLVED IN inflammatory response to wounding (ortholog); mRNA splicing, via spliceosome (ortholog); neural tube closure (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); lysosome (ortholog) NW_004955415 31774017 31778737 + 102018387 AGCD01016697;GBDF01114913;XM_005381017 XP_005381074 MODEL 8909158 protein-coding Lrcol1 leucine rich colipase like 1 ASSOCIATED WITH cervical cancer (ortholog) NW_004955482 429882 431693 + 102021660 AGCD01057172;GBDF01213728;XM_005402958 XP_005403015 MODEL 39134241 misc_rna 7SK 7SK RNA 8922097 protein-coding LOC102004253 kinesin-associated protein 3 NW_004955462 6220175 6390544 - 102004253 AGCD01049277;AGCD01049278;AGCD01049279;AGCD01049280;GBDI01178752;XM_005398164;XM_005398165;XM_005398168;XM_005398169;XM_013521457;XM_013521458 XP_005398221;XP_005398222;XP_005398225;XP_005398226;XP_013376911;XP_013376912 MODEL 8967727 protein-coding Cfap65 cilia and flagella associated protein 65 INVOLVED IN acrosome assembly (ortholog); cilium movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebrotendinous xanthomatosis (ortholog); colon adenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal central apparatus (ortholog); cytoplasm (ortholog) NW_004955453 14394853 14431774 + 102024756 AGCD01044864;GBDK01088182;XM_005395597;XM_005395609;XM_005395610;XM_013519777;XM_013519778;XM_013519779;XM_013519780;XM_013519781;XM_013519782;XM_013519783;XM_013519784;XM_013519785;XM_013519786 XP_005395654;XP_005395666;XP_005395667;XP_013375231;XP_013375232;XP_013375233;XP_013375234;XP_013375235;XP_013375236;XP_013375237;XP_013375238;XP_013375239;XP_013375240 MODEL 8981652 protein-coding Brat1 BRCA1 associated ATM activator 1 ENCODES a protein that exhibits ribonuclease inhibitor activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); apraxia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955460 12662005 12674223 - 102012169 AGCD01048661;GBDI01062771;XM_005397864;XM_013521148;XM_013521149;XM_013521150;XM_013521151;XM_013521152 XP_005397921;XP_013376602;XP_013376603;XP_013376604;XP_013376605;XP_013376606 MODEL 8981595 protein-coding Ahsp alpha hemoglobin stabilizing protein INVOLVED IN erythrocyte differentiation (ortholog); protein folding (ortholog); protein stabilization (ortholog); ASSOCIATED WITH cerebral infarction (ortholog); coronary restenosis (ortholog); Fetal Death (ortholog); FOUND IN cytoplasm (ortholog) NW_004955493 8337761 8344497 + 102007783 AGCD01061291;GBDJ01142828;XM_005405323;XM_005405324 XP_005405380;XP_005405381 MODEL 8937492 protein-coding C5ar1 complement C5a receptor 1 ENCODES a protein that exhibits complement component C5a binding (ortholog); complement component C5a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955574 1221942 1229634 + 102008996 AGCD01075168;AGCD01075169;GBDK01317924;XM_005413864 XP_005413921 MODEL 8762936 ncrna LOC102014163 uncharacterized LOC102014163 NW_004955435 8361372 8392355 + 102014163 AGCD01033001;GBCQ01143546;XR_261671 MODEL 8995426 protein-coding Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase ENCODES a protein that exhibits protein guanylyltransferase activity (ortholog); RNA ligase (GTP) activity (ortholog); vinculin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); IRE1-mediated unfolded protein response (ortholog); mRNA splicing, via endonucleolytic cleavage and ligation (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 41360370 41375215 - 102029147 AGCD01005548;AGCD01005549;GBCC01046704;XM_013519150 XP_013374604 MODEL 8798305 protein-coding Prnd prion like protein doppel ENCODES a protein that exhibits copper ion binding (ortholog); INVOLVED IN acrosome reaction (ortholog); intracellular copper ion homeostasis (ortholog); single fertilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955415 15469500 15474817 + 102008218 AGCD01016345;GBDF01009044;XM_005380819 XP_005380876 MODEL 8971520 protein-coding Ap1ar adaptor related protein complex 1 associated regulatory protein ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); kinesin binding (ortholog); INVOLVED IN Golgi to endosome transport (ortholog); intracellular protein localization (ortholog); negative regulation of cell motility (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); transport vesicle (ortholog) NW_004955457 14456414 14471584 - 102006317 AGCD01047073;GBCB01100575;XM_005397124 XP_005397181 MODEL 8913573 protein-coding Recql RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); INVOLVED IN replication fork processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 17115443 17148708 - 102017214 AGCD01014129;AGCD01014130;GBCQ01179121;XM_005379058;XM_013511493 XP_005379115;XP_013366947 MODEL 8758225 protein-coding LOC102013792 uncharacterized LOC102013792 NW_004955405 39039227 39041671 - 102013792 AGCD01005495;GBDK01100241;XM_005374598;XM_013518951 XP_005374655;XP_013374405 MODEL 39131890 rrna 5S_rRNA 5S ribosomal RNA 39133967 misc_rna 7SK 7SK RNA 9015417 protein-coding Fkbp1b FKBP prolyl isomerase 1B ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium channel regulator activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); insulin secretion (ortholog); negative regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); catecholaminergic polymorphic ventricular tachycardia (ortholog); FOUND IN calcium channel complex (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955469 6263271 6274823 + 102023893 AGCD01052376;GBCB01028793;GBDF01063636;XM_005400373 XP_005400430 MODEL 9022768 protein-coding LOC102009828 olfactory receptor 52N2-like NW_004955414 21765507 21766469 + 102009828 AGCD01015432;XM_005380503 XP_005380560 MODEL 8809840 ncrna LOC102012234 uncharacterized LOC102012234 NW_004955433 7547240 7568531 + 102012234 AGCD01031573;GBDF01235477;XR_001234708;XR_001234709;XR_001234710 MODEL 8992992 protein-coding Cys1 cystin 1 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN inner ear development (ortholog); kidney development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); polycystic kidney disease (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955487 5455820 5461362 - 102027752 AGCD01059333;AGCD01059334;GBBH01180330;GBCQ01098223;XM_013504397 XP_013359851 MODEL 8968573 trna Trnat-cgu transfer RNA threonine (anticodon CGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955442;NW_004955465;NW_004955465;NW_004955481 4512289;13846174;13285428;6565067 4512360;13846247;13285500;6565138 -;+;+;+ 101978813 AGCD01037528;AGCD01050597;AGCD01050627;AGCD01057031 MODEL 8738494 protein-coding Adgrb2 adhesion G protein-coupled receptor B2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); G protein-coupled receptor signaling pathway (ortholog); peripheral nervous system development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955452 10131371 10167597 - 102011834 AGCD01044269;GBDI01055095;XM_005395033;XM_005395035;XM_005395036;XM_013519736;XM_013519737;XM_013519738;XM_013519739;XM_013519740 XP_005395090;XP_005395092;XP_005395093;XP_013375190;XP_013375191;XP_013375192;XP_013375193;XP_013375194 MODEL 8751228 protein-coding Atoh8 atonal bHLH transcription factor 8 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); E-box binding (ortholog); INVOLVED IN formation of primary germ layer (ortholog); myoblast proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955424 1775139 1803106 - 102018621 AGCD01024247;AGCD01024248;GBBH01041313;GBCE01007775;XM_013514738 XP_013370192 MODEL 8995111 pseudo LOC102018426 coiled-coil domain-containing protein 152-like NW_004955432 5609953 5610904 + 102018426 AGCD01030791 MODEL 8916445 protein-coding Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 INVOLVED IN regulation of postsynaptic density assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); postsynaptic density membrane (ortholog) NW_004955468 231164 240924 + 102025993 AGCD01051686;GBDI01025109;GBDJ01423007;XM_005399787 XP_005399844 MODEL 8940409 protein-coding Azin1 antizyme inhibitor 1 The protein encoded by this gene belongs to the antizyme inhibitor family, which plays a role in cell growth and proliferation by maintaining polyamine homeostasis within the cell. Antizyme inhibitors are homologs of ornithine decarboxylase (ODC, the key enzyme in polyamine biosynthesis) that have lost the ability to decarboxylase ornithine; however, retain the ability to bind to antizymes. Antizymes negatively regulate intracellular polyamine levels by binding to ODC and targeting it for degradation, as well as by inhibiting polyamine uptake. Antizyme inhibitors function as positive regulators of polyamine levels by sequestering antizymes and neutralizing their effect. This gene encodes antizyme inhibitor 1, the first member of this gene family that is ubiquitously expressed, and is localized in the nucleus and cytoplasm. Overexpression of antizyme inhibitor 1 gene has been associated with increased proliferation, cellular transformation and tumorigenesis. Gene knockout studies showed that homozygous mutant mice lacking functional antizyme inhibitor 1 gene died at birth with abnormal liver morphology. [provided by RefSeq, Sep 2014] NW_004955417 27231695 27259564 - 102019802 AGCD01018541;AGCD01018542;AGCD01018543;GBBH01160932;GBCB01040687;GBCC01032994;GBCQ01062120;GBDJ01125891;NM_001291639 NP_001278568 REVIEWED 8881807 pseudo LOC102004607 phosphatidylserine synthase 1 pseudogene NW_004955419 18515166 18516459 - 102004607 AGCD01020175 MODEL 9042091 protein-coding Il36rn interleukin 36 receptor antagonist INVOLVED IN antifungal humoral response (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); negative regulation of interleukin-17 production (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955470 1209389 1214730 - 102021960 AGCD01052630;GBCC01027722;XM_005400588;XM_013522678 XP_005400645;XP_013378132 MODEL 9066884 pseudo LOC102004979 survival of motor neuron-related-splicing factor 30 pseudogene NW_004955548 1417585 1418300 - 102004979 AGCD01072375 MODEL 8840191 protein-coding Arg1 arginase 1 ENCODES a protein that exhibits arginase activity (ortholog); identical protein binding (ortholog); manganese ion binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to glucagon stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute necrotizing pancreatitis (ortholog); amino acid metabolic disorder (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955436 12235767 12247817 + 102018129 AGCD01033834;GBDK01069675;XM_005389201;XM_005389202 XP_005389258;XP_005389259 MODEL 8795371 protein-coding Slc39a4 solute carrier family 39 member 4 ENCODES a protein that exhibits identical protein binding (ortholog); metal ion binding (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to zinc ion starvation (ortholog); intracellular zinc ion homeostasis (ortholog); zinc ion transmembrane transport (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); acrodermatitis enteropathica (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasmic vesicle (ortholog); endosome (ortholog) NW_004955454 3041316 3047419 - 102005106 AGCD01045048;AGCD01045049;GBDK01284146;XM_005395883 XP_005395940 MODEL 8988531 protein-coding Plscr4 phospholipid scramblase 4 ENCODES a protein that exhibits CD4 receptor binding (ortholog); enzyme binding (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) NW_004955474 11299390 11331982 + 102020330 AGCD01054617;AGCD01054618;GBBH01116620;GBDI01075931;XM_005401439 XP_005401496 MODEL 8934095 protein-coding Dnah8 dynein axonemal heavy chain 8 ENCODES a protein that exhibits microtubule motor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) NW_004955437 4441776 4722261 - 102013538 AGCD01034365;AGCD01034366;AGCD01034367;AGCD01034368;AGCD01034369;GBBH01019158;XM_005389605;XM_005389606;XM_005389607;XM_005389608 XP_005389662;XP_005389663;XP_005389664;XP_005389665 MODEL 8819669 protein-coding Ccdc127 coiled-coil domain containing 127 INVOLVED IN lipid homeostasis (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955504 17499 36804 - 102017141 AGCD01064813;GBCE01077932;XM_005406983 XP_005407040 MODEL 8707173 protein-coding LOC102007528 histone H2B type 1 NW_004955465 13392728 13393418 + 102007528 AGCD01050607;XM_005398952 XP_005399009 MODEL 39131752 rrna 5S_rRNA 5S ribosomal RNA 9054308 protein-coding LOC102011862 uncharacterized LOC102011862 NW_004955474 8241162 8246129 - 102011862 AGCD01054547;GBDF01264907;XM_013502768 XP_013358222 MODEL 8708959 pseudo LOC102004256 archaemetzincin-2-like NW_004955463 752523 753108 + 102004256 AGCD01049497 MODEL 8777367 protein-coding Cebpd CCAAT enhancer binding protein delta ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner ear development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955454 7711010 7711680 - 102029150 AGCD01045302;GBBH01000020;GBDJ01001327;XM_005396117 XP_005396174 MODEL 8912430 protein-coding Cdc25b cell division cycle 25B ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN female meiosis I (ortholog); oocyte maturation (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955415 14637295 14647181 + 102030415 AGCD01016302;GBDI01072268;XM_013512285 XP_013367739 MODEL 39134099 misc_rna 7SK 7SK RNA 8846121 protein-coding Clip1 CAP-Gly domain containing linker protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); positive regulation of dendrite development (ortholog); positive regulation of microtubule polymerization (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 16 (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic microtubule (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955482 6213363 6330601 + 102030634 AGCD01057382;AGCD01057383;AGCD01057384;AGCD01057385;AGCD01057386;GBDK01141884;XM_005403080;XM_005403081;XM_005403082;XM_005403083;XM_005403084;XM_005403085;XM_005403086;XM_005403087;XM_005403088;XM_005403089;XM_005403090;XM_005403091;XM_005403092;XM_005403093;XM_005403094;XM_013503650 XP_005403137;XP_005403138;XP_005403139;XP_005403140;XP_005403141;XP_005403142;XP_005403143;XP_005403144;XP_005403145;XP_005403146;XP_005403147;XP_005403148;XP_005403149;XP_005403150;XP_005403151;XP_013359104 MODEL 9041705 ncrna LOC102010245 uncharacterized LOC102010245 NW_004955468 7542624 7555442 + 102010245 AGCD01052002;GBDF01145028;XR_263402 MODEL 8835267 protein-coding LOC102008663 butyrophilin subfamily 3 member A1-like NW_004955437 1060528 1076067 + 102008663 AGCD01034189;XM_013516725 XP_013372179 MODEL 8967925 protein-coding Eri2 ERI1 exoribonuclease family member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); thymoma (ortholog) NW_004955493 96758 103669 - 102029981 AGCD01060838;GBCC01027768;XM_005405034;XM_013504827 XP_005405091;XP_013360281 MODEL 8989405 protein-coding Sh2b2 SH2B adaptor protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); SH2 domain binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); antigen receptor-mediated signaling pathway (ortholog); B cell receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955456 15253711 15265874 - 102016564 AGCD01046665;AGCD01046666;GBCB01101553;GBDI01137601;XM_013520635 XP_013376089 MODEL 8768942 protein-coding Sowahd sosondowah ankyrin repeat domain family member D ASSOCIATED WITH COVID-19 (ortholog) NW_004955534 220999 222550 - 102008980 AGCD01070441;GBBH01135014;XM_005410434 XP_005410491 MODEL 8977314 protein-coding Acp7 acid phosphatase 7, tartrate resistant (putative) ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955468 432907 452848 - 102028399 AGCD01051698;AGCD01051699;AGCD01051700;AGCD01051701;GBDJ01102501;XM_005399796;XM_005399797;XM_013522275 XP_005399853;XP_005399854;XP_013377729 MODEL 9032646 ncrna LOC102022510 uncharacterized LOC102022510 NW_004955424 1640539 1648980 + 102022510 AGCD01024243;XR_261026 MODEL 8845557 ncrna LOC102008291 uncharacterized LOC102008291 NW_004955408 21058606 21068901 - 102008291 AGCD01008549;GBBH01016936;XR_001232367 MODEL 8948531 protein-coding LOC102003196 alanyl-tRNA editing protein Aarsd1-like NW_004955451 16762844 16769585 - 102003196 AGCD01043704;AGCD01043705;GBDJ01008508;XM_013519243 XP_013374697 MODEL 8994969 ncrna LOC102011013 uncharacterized LOC102011013 NW_004955487 9073542 9074205 + 102011013 AGCD01059449;AGCD01059450;GBDF01127916;XR_263991 MODEL 8964013 protein-coding Il3ra interleukin 3 receptor subunit alpha ENCODES a protein that exhibits interleukin-3 binding (ortholog); interleukin-3 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-3-mediated signaling pathway (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955499 1004432 1011950 + 102007248 AGCD01063305;GBBH01025894;GBCE01069501;XM_013505601 XP_013361055 MODEL 39131891 rrna 5S_rRNA 5S ribosomal RNA 8713441 pseudo LOC102013793 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955405 1278334 1278982 + 102013793 AGCD01004601 MODEL 8802845 protein-coding Abcc10 ATP binding cassette subfamily C member 10 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN leukotriene metabolic process (ortholog); leukotriene transport (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; neviparine pharmacokinetics pathway; vinblastine pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955437 9278977 9297618 + 102008348 AGCD01034524;GBDI01283959;XM_005389768 XP_005389825 MODEL 8818527 ncrna LOC102006036 uncharacterized LOC102006036 NW_004955421 23412284 23447843 + 102006036 AGCD01022183;GBCQ01089850;XR_001233831;XR_260822 MODEL 8891533 protein-coding LOC102013443 pancreatic alpha-amylase NW_004955435 8083712 8090769 - 102013443 AGCD01032994;GBDF01171554;XM_005388816;XM_005388817;XM_005388818 XP_005388873;XP_005388874;XP_005388875 MODEL 8802824 protein-coding LOC102007158 histone-binding protein RBBP7-like NW_004955558 643112 644737 + 102007158 AGCD01073381;XM_013508855 XP_013364309 MODEL 9058657 pseudo LOC102014167 cytochrome b-c1 complex subunit 2, mitochondrial pseudogene NW_004955537 3383684 3403702 + 102014167 AGCD01070957 MODEL 8967587 protein-coding Clip2 CAP-Gly domain containing linker protein 2 ENCODES a protein that exhibits microtubule binding (ortholog); microtubule plus-end binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); dendritic microtubule (ortholog) NW_004955456 13593322 13631809 - 102018569 AGCD01046603;AGCD01046604;AGCD01046605;GBCE01098490;GBDK01021994;XM_005396751 XP_005396808 MODEL 8768006 protein-coding Cfap68 cilia and flagella associated protein 68 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955412 13605526 13609865 + 102020782 AGCD01012842;GBDF01001491;XM_005378086;XM_005378087 XP_005378143;XP_005378144 MODEL 8949334 ncrna LOC102009056 uncharacterized LOC102009056 NW_004955418 15612269 15614198 - 102009056 AGCD01019108;GBDF01097946;XR_260557 MODEL 8990774 protein-coding C5ar2 complement C5a receptor 2 INVOLVED IN negative regulation of interleukin-6 production (ortholog); negative regulation of neutrophil chemotaxis (ortholog); negative regulation of tumor necrosis factor production (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); basal plasma membrane (ortholog); plasma membrane (ortholog) NW_004955574 1221950 1242547 + 102008790 AGCD01075168;AGCD01075169;AGCD01075170;AGCD01075171;XM_005413863;XM_013509538;XM_013509539 XP_005413920;XP_013364992;XP_013364993 MODEL 8878929 protein-coding Atosa atos homolog A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955409 2261169 2345489 + 102018262 AGCD01009194;AGCD01009195;AGCD01009196;AGCD01009197;GBBH01090816;GBCB01023407;XM_013510275;XM_013510277 XP_013365729;XP_013365731 MODEL 8982417 protein-coding Arg2 arginase 2 ENCODES a protein that exhibits arginase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN urea cycle pathway; ASSOCIATED WITH acute kidney failure (ortholog); asthma (ortholog); congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog) NW_004955466 2549557 2577060 - 102010682 AGCD01050744;AGCD01050745;GBCB01001233;XM_005399066 XP_005399123 MODEL 9051825 protein-coding Prnp prion protein (Kanno blood group) ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); ATP-dependent protein binding (ortholog); INVOLVED IN amyloid precursor protein metabolic process (ortholog); cellular response to amyloid-beta (ortholog); cellular response to copper ion (ortholog); PARTICIPATES IN glypican signaling pathway; iron uptake pathway; Notch signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955415 15442313 15454644 + 102007546 AGCD01016345;GBDJ01175870;XM_005380818 XP_005380875 MODEL 8741444 protein-coding Rtel1 regulator of telomere elongation helicase 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); INVOLVED IN DNA strand displacement (ortholog); mitotic telomere maintenance via semi-conservative replication (ortholog); negative regulation of DNA recombination (ortholog); ASSOCIATED WITH autosomal recessive dyskeratosis congenita 5 (ortholog); childhood astrocytic tumor (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) NW_004955528 531680 578003 - 102007691 AGCD01069537;AGCD01069538;GBDJ01227066;XM_013507437;XM_013507438;XM_013507439;XM_013507440;XM_013507441;XM_013507442;XM_013507443;XM_013507444;XM_013507445;XR_001231981 XP_013362891;XP_013362892;XP_013362893;XP_013362894;XP_013362895;XP_013362896;XP_013362897;XP_013362898;XP_013362899 MODEL 9009185 protein-coding LOC102022512 EKC/KEOPS complex subunit LAGE3-like NW_004955498 2623974 2625284 + 102022512 AGCD01062813;GBDF01081721;XM_005406401 XP_005406458 MODEL 8995536 protein-coding Slc39a5 solute carrier family 39 member 5 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to zinc ion starvation (ortholog); eye development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955458 3843492 3849794 + 102005568 AGCD01047351;GBDK01295504;XM_005397299;XM_005397300;XM_005397301 XP_005397356;XP_005397357;XP_005397358 MODEL 8812028 pseudo LOC102012238 ras GTPase-activating protein-binding protein 2 pseudogene NW_004955526 2838596 2839845 + 102012238 AGCD01069322 MODEL 8876021 protein-coding Ccdc13 coiled-coil domain containing 13 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN axonemal central pair (ortholog); centriolar satellite (ortholog); centrosome (ortholog) NW_004955420 28061460 28107509 + 102026119 AGCD01021469;AGCD01021470;GBBH01139814;XM_005383534;XM_005383535 XP_005383591;XP_005383592 MODEL 8998376 protein-coding Dnah9 dynein axonemal heavy chain 9 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); mucociliary clearance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955467 5357500 5677144 - 102027282 AGCD01051389;AGCD01051390;AGCD01051391;AGCD01051392;AGCD01051393;AGCD01051394;AGCD01051395;AGCD01051396;GBBH01035041;XM_005399350;XM_005399351;XM_005399353;XM_013522070;XM_013522071;XM_013522072 XP_005399407;XP_005399408;XP_005399410;XP_013377524;XP_013377525;XP_013377526 MODEL 8908232 protein-coding Ap1b1 adaptor related protein complex 1 subunit beta 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); synaptic vesicle (ortholog) NW_004955455 3632053 3686007 - 102005560 AGCD01045642;AGCD01045643;GBCQ01034259;XM_005396205;XM_005396206;XM_005396207;XM_005396208;XM_013520456 XP_005396262;XP_005396263;XP_005396264;XP_005396265;XP_013375910 MODEL 8889940 protein-coding Fkbp2 FKBP prolyl isomerase 2 NW_004955422 20834741 20837594 - 102017784 AGCD01023092;GBBH01031180;XM_005384627;XM_005384628;XM_005384630;XM_005384631;XM_005384632 XP_005384684;XP_005384685;XP_005384687;XP_005384688;XP_005384689 MODEL 8872427 protein-coding Cysltr1 cysteinyl leukotriene receptor 1 ENCODES a protein that exhibits leukotriene receptor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH acute asthma (ortholog); Acute Lung Injury (ortholog); allergic asthma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955557 1667518 1702272 - 102022430 AGCD01073303;AGCD01073304;AY462138;GBCE01034656;XM_005412634;XM_005412635 AAR26537;XP_005412691;XP_005412692 MODEL 8775840 protein-coding Il4 interleukin 4 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN B cell costimulation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to mercury ion (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-12 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Hepatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); interleukin-4 receptor complex (ortholog) NW_004955408 4058052 4065999 + 102015609 AGCD01008086;XM_013507371 XP_013362825 MODEL 8979663 protein-coding Brca1 BRCA1 DNA repair associated ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to indole-3-methanol (ortholog); cellular response to ionizing radiation (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; forkhead class A signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-B complex (ortholog); BRCA1-BARD1 complex (ortholog) NW_004955451 16819463 16870780 - 102029928 AGCD01043709;AGCD01043710;AGCD01043711;GBDF01225401;GBDF01304989;JN414194;XM_005394496;XM_013519228;XM_013519229;XM_013519230;XM_013519231;XR_001235969 AEP18221;XP_005394553;XP_013374682;XP_013374683;XP_013374684;XP_013374685 MODEL 8999840 protein-coding Cebpe CCAAT enhancer binding protein epsilon ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); granulocyte differentiation (ortholog); macrophage differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute promyelocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955409 37186282 37187914 + 102023985 AGCD01010498;GBBH01045736;XM_005377089 XP_005377146 MODEL 8700916 ncrna LOC102004612 uncharacterized LOC102004612 NW_004955422 13845624 13851380 - 102004612 AGCD01022839;GBCE01145779;XR_001233893;XR_260876 MODEL 8790503 protein-coding LOC102008665 dnaJ homolog subfamily B member 6-like NW_004955438 5105330 5113520 - 102008665 AGCD01035057;GBDF01094584;GBDF01237045;XM_013517150 XP_013372604 MODEL 8835185 protein-coding Azin2 antizyme inhibitor 2 The protein encoded by this gene belongs to the antizyme inhibitor family, which plays a role in cell growth and proliferation by maintaining polyamine homeostasis within the cell. Antizyme inhibitors are homologs of ornithine decarboxylase (ODC, the key enzyme in polyamine biosynthesis) that have lost the ability to decarboxylase ornithine; however, retain the ability to bind to antizymes. Antizymes negatively regulate intracellular polyamine levels by binding to ODC and targeting it for degradation, as well as by inhibiting polyamine uptake. Antizyme inhibitors function as positive regulators of polyamine levels by sequestering antizymes and neutralizing their effect. This gene encodes antizyme inhibitor 2, the second member of this gene family. Like antizyme inhibitor 1, antizyme inhibitor 2 interacts with all 3 antizymes and stimulates ODC activity and polyamine uptake. However, unlike antizyme inhibitor 1, which is ubiquitously expressed and localized in the nucleus and cytoplasm, antizyme inhibitor 2 is predominantly expressed in the brain and testis and localized in the endoplasmic reticulum-golgi intermediate compartment. Recent studies indicate that antizyme inhibitor 2 is also expressed in specific cell types in ovaries, adrenal glands and pancreas, and in mast cells. The exact function of this gene is not known, however, available data suggest its role in cell growth, spermiogenesis, vesicular trafficking and secretion. There has been confusion in literature and databases over the nomenclature of this gene, stemming from an earlier report that a human cDNA clone (identical to ODCp/AZIN2) had arginine decarboxylase (ADC) activity (PMID:14738999). Subsequent studies in human and mouse showed that antizyme inhibitor 2 was devoid of arginine decarboxylase activity (PMID:19956990). [provided by RefSeq, Sep 2014] NW_004955452 11304345 11330370 + 102006306 AGCD01044334;AGCD01044335;GBDF01009198;GBDK01263680;NM_001293750;XM_013519440;XM_013519441 NP_001280679;XP_013374894;XP_013374895 REVIEWED 8723562 protein-coding Wdr83os WD repeat domain 83 opposite strand ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH VARIABLE FAMILIAL HYPERCHOLANEMIA (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog); protein folding chaperone complex (ortholog) NW_004955415 31772401 31773916 - 102018721 AGCD01016697;GBCQ01011781;XM_005381018 XP_005381075 MODEL 8993240 protein-coding LOC102004982 uncharacterized LOC102004982 NW_004955558 812403 851364 - 102004982 AGCD01073392;AGCD01073393;AGCD01073394;GBDF01050328;XM_013508873;XM_013508874;XM_013508875;XM_013508876;XM_013508877;XM_013508878;XM_013508879;XM_013508880;XR_001232320;XR_001232321;XR_001232322;XR_001232323 XP_013364327;XP_013364328;XP_013364329;XP_013364330;XP_013364331;XP_013364332;XP_013364333;XP_013364334 MODEL 39134242 misc_rna 7SK 7SK RNA 8938923 protein-coding Plscr5 phospholipid scramblase family member 5 ASSOCIATED WITH lung cancer (ortholog); stomach cancer (ortholog) NW_004955474 10855958 10903801 + 102017654 AGCD01054604;GBDF01041495;XM_005401429;XM_013502715 XP_005401486;XP_013358169 MODEL 8725546 protein-coding LOC102013444 vomeronasal type-2 receptor 116-like NW_004955524 3567737 3596413 + 102013444 AGCD01068907;AGCD01068908;AGCD01068909;AGCD01068910;AGCD01068911;AGCD01068912;AGCD01068913;GBDF01116192;XM_005409711 XP_005409768 MODEL 8979398 protein-coding Aida axin interactor, dorsalization associated ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of protein-containing complex assembly (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955520 1819617 1851273 + 102017806 AGCD01068062;AGCD01068063;GBBH01062431;GBDF01236570;XM_005409254 XP_005409311 MODEL 8868589 protein-coding Sh2b3 SH2B adaptor protein 3 ENCODES a protein that exhibits phosphate ion binding (ortholog); protein tyrosine kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to chemokine (ortholog); cellular response to interleukin-3 (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Breast Cancer, Familial (ortholog); chronic myeloid leukemia (ortholog) NW_004955482 8079905 8100791 + 102006034 AGCD01057503;GBDI01138139;XM_013503649 XP_013359103 MODEL 8838854 protein-coding Lrfn2 leucine rich repeat and fibronectin type III domain containing 2 INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955437 7202466 7358616 - 102004855 AGCD01034453;AGCD01034454;AGCD01034455;AGCD01034456;AGCD01034457;AGCD01034458;GBCB01112705;XM_005389663 XP_005389720 MODEL 9034625 protein-coding Recql4 RecQ like helicase 4 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); bubble DNA binding (ortholog); DNA/DNA annealing activity (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of sister chromatid cohesion (ortholog); pigmentation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Baller-Gerold syndrome (ortholog); brain disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955454 3136097 3142525 - 102012055 AGCD01045057;GBDF01177422;XM_005395909;XM_005395911;XM_005395913 XP_005395966;XP_005395968;XP_005395970 MODEL 8743771 protein-coding Adgrb3 adhesion G protein-coupled receptor B3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); motor learning (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Dwarfism (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955488 3803859 4509043 + 102023707 AGCD01059585;AGCD01059586;AGCD01059587;AGCD01059588;AGCD01059589;AGCD01059590;AGCD01059591;AGCD01059592;AGCD01059593;AGCD01059594;AGCD01059595;AGCD01059596;AGCD01059597;GBCE01177377;XM_005404463;XM_005404464;XM_005404465 XP_005404520;XP_005404521;XP_005404522 MODEL 8871437 ncrna LOC102018430 uncharacterized LOC102018430 NW_004955434 6923205 7013018 - 102018430 AGCD01032221;AGCD01032222;AGCD01032223;GBBH01025474;XR_001234808;XR_261613;XR_261615 MODEL 39131892 rrna 5S_rRNA 5S ribosomal RNA 39134100 misc_rna 7SK 7SK RNA 9001694 protein-coding Amigo3 adhesion molecule with Ig like domain 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN heterophilic cell-cell adhesion (ortholog); negative regulation of neuron projection development (ortholog); nervous system development (ortholog); ASSOCIATED WITH Optic Nerve Injuries (ortholog); sciatic neuropathy (ortholog); Spinal Cord Compression (ortholog) NW_004955532 1618659 1621706 - 102015887 AGCD01070196;GBDF01281705;XM_005410208 XP_005410265 MODEL 8702994 protein-coding Abcc12 ATP binding cassette subfamily C member 12 ASSOCIATED WITH bone marrow disease (ortholog); Breast Cancer, Familial (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955474 7166148 7238013 + 102008402 AGCD01054515;AGCD01054516;GBDF01120114;XM_005401403;XM_005401404;XM_005401405;XM_005401406 XP_005401460;XP_005401461;XP_005401462;XP_005401463 MODEL 39133968 misc_rna 7SK 7SK RNA 39131753 rrna 5S_rRNA 5S ribosomal RNA 8804181 ncrna LOC102009829 uncharacterized LOC102009829 NW_004955415 3199565 3227325 + 102009829 AGCD01015927;GBDF01041582;XR_260260;XR_260261 MODEL 8801140 pseudo LOC102007529 pre-mRNA-splicing factor CWC22 homolog NW_004955465 13700490 13703481 - 102007529 AGCD01050618;AGCD01050619 MODEL 8867928 protein-coding LOC102009058 L-amino-acid oxidase-like NW_004955418 29930239 29946380 - 102009058 AGCD01019491;AGCD01019492;XM_005382362 XP_005382419 MODEL 8733750 protein-coding LOC102014170 potassium channel subfamily K member 16 NW_004955437 4219222 4222532 + 102014170 AGCD01034363;GBDI01386526;XM_013516721 XP_013372175 MODEL 8738962 protein-coding Clip3 CAP-Gly domain containing linker protein 3 ENCODES a protein that exhibits ganglioside binding (ortholog); microtubule binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); membrane biogenesis (ortholog); negative regulation of microtubule polymerization (ortholog); FOUND IN early endosome membrane (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955468 2560953 2575073 + 102011753 AGCD01051827;GBDI01208264;XM_005399927;XM_005399928 XP_005399984;XP_005399985 MODEL 8960601 pseudo LOC102011014 60S ribosomal protein L32 pseudogene NW_004955422 28865640 28866566 + 102011014 AGCD01023372 MODEL 15036855 trna Trnat-ggu transfer RNA threonine (anticodon GGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978811 8915903 protein-coding Argfx arginine-fifty homeobox ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955427 20965012 20969269 + 102030651 AGCD01027429;GBDF01307515;XM_005386487 XP_005386544 MODEL 8823825 pseudo LOC102004258 protein tyrosine phosphatase type IVA 1 pseudogene NW_004955464 8933302 8933760 - 102004258 AGCD01050099 MODEL 8806108 protein-coding Prob1 proline rich basic protein 1 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955418 1163993 1169968 + 102023699 AGCD01018711;AGCD01018712;GBCQ01097583;GBDJ01097373;XM_005382339 XP_005382396 MODEL 9021950 pseudo LOC102010247 S-phase kinase-associated protein 1 pseudogene NW_004955413 5920746 5923360 + 102010247 AGCD01013695 MODEL 8740023 protein-coding LOC102013799 chromosome unknown open reading frame, human C21orf91 INVOLVED IN cerebral cortex neuron differentiation (ortholog); positive regulation of dendritic spine development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955407 19093931 19124997 - 102013799 AGCD01007294;AGCD01007295;GBDJ01043497;XM_005375581 XP_005375638 MODEL 8794174 protein-coding Eri3 ERI1 exoribonuclease family member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955464 13855581 13984598 + 102017107 AGCD01050294;AGCD01050295;AGCD01050296;AGCD01050297;AGCD01050298;GBBH01114559;XM_005398762;XM_005398764;XM_013521692;XM_013521693;XM_013521694;XM_013521696;XM_013521697 XP_005398819;XP_005398821;XP_013377146;XP_013377147;XP_013377148;XP_013377150;XP_013377151 MODEL 8799794 ncrna LOC102007160 uncharacterized LOC102007160 NW_004955443 4405793 4414236 + 102007160 AGCD01038213;GBDF01080321;XR_262175 MODEL 8857651 protein-coding Recql5 RecQ like helicase 5 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); helicase activity (ortholog); INVOLVED IN cellular response to camptothecin (ortholog); cellular response to xenobiotic stimulus (ortholog); chromosome separation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955506 6574802 6612763 + 102015425 AGCD01065432;GBDI01137109;XM_005407490;XM_005407491 XP_005407547;XP_005407548 MODEL 8788525 protein-coding Sox10 SRY-box transcription factor 10 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cell differentiation (ortholog); cell maturation (ortholog); cellular response to progesterone stimulus (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); Kallmann syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); mitochondrial outer membrane (ortholog) NW_004955413 24313311 24323112 - 102013710 AGCD01014360;GBBH01007145;XM_005379237 XP_005379294 MODEL 9027719 pseudo LOC102008295 prefoldin subunit 4 pseudogene NW_004955410 29037966 29038370 - 102008295 AGCD01011273 MODEL 8811858 ncrna LOC102003197 uncharacterized LOC102003197 NW_004955404 43067814 43068635 - 102003197 AGCD01004373;GBDF01288559;XR_259335 MODEL 8701912 protein-coding Il4i1 interleukin 4 induced 1 ENCODES a protein that exhibits L-amino-acid oxidase activity (ortholog); L-phenylalaine oxidase activity (ortholog); INVOLVED IN L-phenylalanine catabolic process (ortholog); L-tryptophan catabolic process (ortholog); L-tyrosine catabolic process (ortholog); PARTICIPATES IN Canavan disease pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); cervical cancer (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog); immunological synapse (ortholog) NW_004955559 1012634 1047051 + 102025183 AGCD01073626;GBDF01006554;XM_005412805;XM_005412806;XM_005412808;XM_013508954;XM_013508955;XM_013508956;XM_013508957;XM_013508958;XM_013508959;XM_013508960;XM_013508961;XM_013508962;XM_013508963;XM_013508964;XM_013508965 XP_005412862;XP_005412863;XP_005412865;XP_013364408;XP_013364409;XP_013364410;XP_013364411;XP_013364412;XP_013364413;XP_013364414;XP_013364415;XP_013364416;XP_013364417;XP_013364418;XP_013364419 MODEL 8757363 protein-coding Acr acrosin ENCODES a protein that exhibits amidase activity (ortholog); D-mannose binding (ortholog); fucose binding (ortholog); INVOLVED IN acrosome matrix dispersal (ortholog); acrosome reaction (ortholog); binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); spermatogenic failure 87 (ortholog); FOUND IN acrosomal vesicle (ortholog); Golgi-associated vesicle (ortholog); protein-containing complex (ortholog) NW_004955413 33721984 33728088 + 102009368 AGCD01014688;GBDJ01305187;XM_005379598 XP_005379655 MODEL 39131487 protein-coding C6orf163 chromosome 6 open reading frame 163 10392057 protein-coding Cdc25c cell division cycle 25C ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase binding (ortholog); WW domain binding (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); endometrial cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); nuclear speck (ortholog) NW_004955418 2114053 2138513 + 106148229 AGCD01018741;AGCD01018742;AGCD01018743;GBDF01040026;XM_013512874 XP_013368328 MODEL 8902587 protein-coding Cfap69 cilia and flagella associated protein 69 INVOLVED IN flagellated sperm motility (ortholog); olfactory behavior (ortholog); positive regulation of fertilization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); sperm midpiece (ortholog) NW_004955432 7501908 7569799 + 102021036 AGCD01030844;AGCD01030845;AGCD01030846;AGCD01030847;AGCD01030848;GBDI01322737;XM_005387987;XM_005387988;XM_005387990 XP_005388044;XP_005388045;XP_005388047 MODEL 8954381 pseudo LOC102011864 up-regulated during skeletal muscle growth protein 5 pseudogene NW_004955416 8440518 8440842 - 102011864 AGCD01017056;XM_005381302 MODEL 8861434 protein-coding Wdr86 WD repeat domain 86 ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955491 5739715 5765469 - 102008115 AGCD01060499;AGCD01060500;AGCD01060501;GBCE01031431;GBCQ01153453;XM_005404830 XP_005404887 MODEL 8956603 ncrna LOC102013451 uncharacterized LOC102013451 NW_004955547 654544 658859 - 102013451 AGCD01072171;GBDK01382015;XR_001232230;XR_264899 MODEL 8776199 protein-coding Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN blastocyst growth (ortholog); chromatin organization (ortholog); endodermal cell fate commitment (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); dilated cardiomyopathy (ortholog); esophageal cancer (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955416 8237439 8293802 + 102007761 AGCD01017038;AGCD01017039;AGCD01017040;GBDF01090358;XM_005381285;XM_013512486 XP_005381342;XP_013367940 MODEL 8904755 protein-coding LOC102022513 melanoma-associated antigen 10-like NW_004955498 4139854 4140936 - 102022513 AGCD01062973;XM_013505525 XP_013360979 MODEL 9042372 pseudo LOC102004984 60S ribosomal protein L7 pseudogene NW_004955443 10336436 10337202 - 102004984 AGCD01038376 MODEL 9056454 pseudo LOC102012243 ubiquitin-like protein FUBI pseudogene NW_004955538 2573003 2573441 + 102012243 AGCD01071128 MODEL 8712309 protein-coding Ccdc134 coiled-coil domain containing 134 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cerebellar granule cell differentiation (ortholog); cerebellum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955413 27248879 27265635 + 102023998 AGCD01014500;GBDK01039791;XM_005379367;XM_005379369 XP_005379424;XP_005379426 MODEL 8725824 protein-coding Arglu1 arginine and glutamate rich 1 ENCODES a protein that exhibits pre-mRNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955404 4962000 4980226 + 102026596 AGCD01003302;GBCE01004218;XM_005374018 XP_005374075 MODEL 8702855 pseudo LOC102004259 phosphoacetylglucosamine mutase pseudogene NW_004955465 13182009 13183562 + 102004259 AGCD01050592 MODEL 8778406 protein-coding Ap1g1 adaptor related protein complex 1 subunit gamma 1 ENCODES a protein that exhibits collagen binding (ortholog); GTP-dependent protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN endosome to melanosome transport (ortholog); Golgi to lysosome transport (ortholog); positive regulation of natural killer cell degranulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955484 4430461 4511368 - 102013831 AGCD01058215;AGCD01058216;GBCE01153713;XM_005403516;XM_005403517;XM_013503973;XM_013503974 XP_005403573;XP_005403574;XP_013359427;XP_013359428 MODEL 9048452 ncrna LOC102004619 uncharacterized LOC102004619 NW_004955497 162494 196973 - 102004619 AGCD01062402;GBCC01014237;XR_264187 MODEL 39134101 misc_rna 7SK 7SK RNA 8933016 protein-coding Cebpg CCAAT enhancer binding protein gamma ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); enucleate erythrocyte differentiation (ortholog); immune response (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955468 3137106 3141733 + 102027164 AGCD01051857;GBDF01050723;XM_005399985 XP_005400042 MODEL 8727444 protein-coding Ammecr1 AMMECR nuclear protein 1 ASSOCIATED WITH Dwarfism (ortholog); melanoma (ortholog); midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955490 5538445 5657959 + 102008632 AGCD01060205;AGCD01060206;AGCD01060207;GBDI01339138;XM_005404657 XP_005404714 MODEL 39133969 misc_rna 7SK 7SK RNA 8991054 protein-coding B2m beta-2-microglobulin ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); structural molecule activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class Ib (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular region; cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955416 11205503 11211325 + 102017868 AGCD01017180;AGCD01017181;GBDK01013792;XM_005381424 XP_005381481 MODEL 39134243 misc_rna 7SK 7SK RNA 8711742 protein-coding Pltp phospholipid transfer protein ENCODES a protein that exhibits ceramide binding (ortholog); cerebroside transfer activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN ceramide transport (ortholog); flagellated sperm motility (ortholog); glycolipid transport (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; ASSOCIATED WITH atherosclerosis (ortholog); colon adenocarcinoma (ortholog); Coronary Disease (ortholog); FOUND IN extracellular region (ortholog); high-density lipoprotein particle (ortholog); nucleus (ortholog) NW_004955445 11384723 11399217 + 102026050 AGCD01039689;AGCD01039690;GBCE01006971;XM_005392402 XP_005392459 MODEL 9020114 protein-coding Sh2d1a SH2 domain containing 1A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN humoral immune response (ortholog); natural killer cell activation (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); cerebral infarction (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955473 10345407 10370535 - 102017976 AGCD01054093;AGCD01054094;GBCE01037166;XM_005401276 XP_005401333 MODEL 8969458 protein-coding LOC102014172 olfactory receptor 12-like NW_004955542 1281442 1282674 - 102014172 AGCD01071501;XM_013508127 XP_013363581 MODEL 8959254 protein-coding Slc39a6 solute carrier family 39 member 6 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); intracellular zinc ion homeostasis (ortholog); lymphocyte activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum (ortholog); lamellipodium membrane (ortholog) NW_004955402 22670598 22698455 - 102008795 AGCD01000608;GBDF01192816;XM_005372806 XP_005372863 MODEL 9050522 protein-coding Dnai1 dynein axonemal intermediate chain 1 INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN 9+2 motile cilium (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955472 1599265 1668214 - 102014236 AGCD01053403;AGCD01053404;AGCD01053405;AGCD01053406;AGCD01053407;AGCD01053408;AGCD01053409;GBBH01062174;GBCE01133976;XM_013522970 XP_013378424 MODEL 9011989 protein-coding Cysltr2 cysteinyl leukotriene receptor 2 ENCODES a protein that exhibits cysteinyl leukotriene receptor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); negative regulation of glial cell proliferation (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH otitis media; aspirin-induced respiratory disease (ortholog); asthma (ortholog); FOUND IN membrane (ortholog) NW_004955431 2203342 2282635 + 102018629 AGCD01029924;AGCD01029925;AGCD01029926;GBDI01106238;XM_005387568;XM_005387569;XM_013515743 XP_005387625;XP_005387626;XP_013371197 MODEL 8997258 pseudo LOC102008668 protein S100-A10 pseudogene NW_004955547 477402 477949 + 102008668 AGCD01072162;XM_005411852 MODEL 8769583 protein-coding Rtf2 replication termination factor 2 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); regulation of DNA stability (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955445 2729658 2764447 - 102009331 AGCD01039364;GBDF01005514;XM_005392267 XP_005392324 MODEL 8753031 ncrna LOC102013804 uncharacterized LOC102013804 NW_004955409 11616375 11626479 + 102013804 AGCD01009516;GBDF01277087;XR_001232621;XR_001232622 MODEL 8796603 protein-coding Adgrd1 adhesion G protein-coupled receptor D1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); regulation of skeletal muscle contraction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955482 1091081 1173087 - 102029081 AGCD01057201;AGCD01057202;GBDJ01139336;XM_005402985;XM_005402986;XM_005402987 XP_005403042;XP_005403043;XP_005403044 MODEL 8898092 protein-coding Atosb atos homolog B ASSOCIATED WITH major depressive disorder (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955472 1066661 1077960 + 102012635 AGCD01053370;AGCD01053371;AGCD01053372;GBDJ01136370;XM_005401017;XM_005401019;XM_005401021;XM_013522969 XP_005401074;XP_005401076;XP_005401078;XP_013378423 MODEL 8997399 protein-coding Abcc2 ATP binding cassette subfamily C member 2 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN antibiotic metabolic process (ortholog); benzylpenicillin metabolic process (ortholog); bile acid and bile salt transport (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); alopecia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) NW_004955507 5724788 5791281 + 102018421 AGCD01065688;GBCQ01067528;XM_005407678 XP_005407735 MODEL 8814297 ncrna LOC102009839 uncharacterized LOC102009839 NW_004955418 27098258 27125846 - 102009839 AGCD01019403;GBDK01371466;XR_001233544;XR_001233545;XR_001233546;XR_260585 MODEL 8960409 pseudo LOC102007532 60S ribosomal protein L6 pseudogene NW_004955412 12501193 12501804 - 102007532 AGCD01012820 MODEL 8926576 protein-coding LOC102006039 uncharacterized LOC102006039 NW_004955491 8353014 8354199 + 102006039 AGCD01060614;GBCB01010474;XM_013504570 XP_013360024 MODEL 8813603 protein-coding Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 INVOLVED IN regulation of presynapse assembly (ortholog); regulation of synaptic membrane adhesion (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955468 2629781 2637497 - 102014997 AGCD01051829;GBDI01245282;XM_005399940 XP_005399997 MODEL 8885766 protein-coding Wdr88 WD repeat domain 88 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955468 551574 563630 + 102015187 AGCD01051712;GBDF01088193;XM_013522282 XP_013377736 MODEL 8853750 protein-coding Clip4 CAP-Gly domain containing linker protein family member 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955469 10966830 11042494 + 102017761 AGCD01052553;AGCD01052554;GBDF01153727;GBDF01153747;XM_005400544 XP_005400601 MODEL 9034545 protein-coding LOC102011016 guanylate-binding protein 4 NW_004955423 4931941 4946708 + 102011016 AGCD01023550;GBBH01026001;GBCQ01139851;XM_013514413 XP_013369867 MODEL 8983901 protein-coding LOC102010250 mitochondrial ornithine transporter 2 NW_004955415 12462640 12463852 + 102010250 AGCD01016197;GBDF01083463;XM_005380737 XP_005380794 MODEL 8915617 pseudo LOC102018433 60S ribosomal protein L23a pseudogene NW_004955527 2330626 2331113 + 102018433 AGCD01069431 MODEL 39131894 rrna 5S_rRNA 5S ribosomal RNA 9021535 protein-coding Erich1 glutamate rich 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog) NW_004955403 58508113 58580682 + 102024638 AGCD01003183;AGCD01003184;AGCD01003185;AGCD01003186;GBCQ01178907;GBDJ01117475;XM_013515049 XP_013370503 MODEL 8823216 pseudo LOC102007161 zinc finger protein 451 pseudogene NW_004955444 72378 78511 + 102007161 AGCD01038648;AGCD01038649 MODEL 8824140 protein-coding Sh2d1b SH2 domain containing 1B INVOLVED IN negative regulation of natural killer cell mediated cytotoxicity (ortholog); positive regulation of natural killer cell mediated cytotoxicity (ortholog); regulation of natural killer cell activation (ortholog); ASSOCIATED WITH sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog) NW_004955462 13909266 13934239 + 102013590 AGCD01049435;GBDK01188618;XM_005398275;XR_001236587 XP_005398332 MODEL 8705616 protein-coding Redic1 regulator of DNA class I crossover intermediates 1 ENCODES a protein that exhibits DNA secondary structure binding (ortholog); four-way junction DNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN positive regulation of reciprocal meiotic recombination (ortholog); positive regulation of synaptonemal complex assembly (ortholog); ASSOCIATED WITH spermatogenic failure (ortholog); FOUND IN chromosome (ortholog) NW_004955505 676988 763746 - 102029312 AGCD01064961;GBDF01155084;XM_005407103;XM_005407106;XM_013505952;XM_013505953;XM_013505954;XM_013505955;XM_013505956 XP_005407160;XP_005407163;XP_013361406;XP_013361407;XP_013361408;XP_013361409;XP_013361410 MODEL 8999503 protein-coding Brca2 BRCA2 DNA repair associated ENCODES a protein that exhibits double-stranded DNA binding (ortholog); gamma-tubulin binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cell population proliferation (ortholog); cellular response to ionizing radiation (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN BRCA2-MAGE-D1 complex (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955431 13449287 13526878 - 102011896 AGCD01030308;GBCB01111140;JN414336;XM_005387715;XM_005387716;XM_005387717;XM_005387718;XM_005387719;XM_005387720;XM_013515889;XM_013515890 AEP18373;XP_005387772;XP_005387773;XP_005387774;XP_005387775;XP_005387776;XP_005387777;XP_013371343;XP_013371344 MODEL 39131754 rrna 5S_rRNA 5S ribosomal RNA 8728036 pseudo LOC102003198 methylmalonic aciduria and homocystinuria type D protein, mitochondrial pseudogene NW_004955404 48607830 48609942 - 102003198 AGCD01004506 MODEL 8909440 protein-coding LOC102004261 beta-galactosidase-1-like protein 2 NW_004955412 35259632 35292661 + 102004261 AGCD01013408;GBDI01106604;XM_005378599;XM_005378600;XM_005378601;XM_005378602;XM_013511245;XM_013511246 XP_005378656;XP_005378657;XP_005378658;XP_005378659;XP_013366699;XP_013366700 MODEL 9040249 pseudo LOC102008670 40S ribosomal protein S13 pseudogene NW_004955441 317788 319866 + 102008670 AGCD01036700 MODEL 9004565 pseudo LOC102009061 liver carboxylesterase 2-like NW_004955484 9676099 9679287 - 102009061 AGCD01058425 MODEL 9040341 protein-coding C7 complement C7 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); intracellular sodium ion homeostasis (ortholog); ASSOCIATED WITH Ascites (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955426 25173463 25230897 + 102012222 AGCD01026705;AGCD01026706;AGCD01026707;AGCD01026708;AGCD01026709;XM_013514936 XP_013370390 MODEL 9002231 protein-coding Il4r interleukin 4 receptor ENCODES a protein that exhibits interleukin-13 receptor activity (ortholog); interleukin-4 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); defense response to protozoan (ortholog); immunoglobulin mediated immune response (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); allergic conjunctivitis (ortholog); FOUND IN extracellular region (ortholog); interleukin-13 receptor complex (ortholog); interleukin-4 receptor complex (ortholog) NW_004955493 5546340 5580745 + 102006675 AGCD01061070;AGCD01061071;GBDJ01082206;XM_005405137 XP_005405194 MODEL 8862313 ncrna LOC102011865 uncharacterized LOC102011865 NW_004955477 3946286 3949237 + 102011865 AGCD01055577;GBDF01098162;XR_263654 MODEL 8777832 protein-coding Cfap70 cilia and flagella associated protein 70 INVOLVED IN cell morphogenesis (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axonemal central apparatus (ortholog); axoneme (ortholog); ciliary basal body (ortholog) NW_004955437 18424568 18480327 + 102019431 AGCD01034791;AGCD01034792;AGCD01034793;GBDF01010702;XM_005389984;XM_005389986;XM_013516744;XM_013516745;XM_013516746;XM_013516747;XM_013516748 XP_005390041;XP_005390043;XP_013372198;XP_013372199;XP_013372200;XP_013372201;XP_013372202 MODEL 8747132 protein-coding Ammecr1l AMMECR1 like ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog) NW_004955459 2654361 2678080 + 102020428 AGCD01047994;GBDF01120756;XM_005397568;XM_005397570;XM_005397572 XP_005397625;XP_005397627;XP_005397629 MODEL 8837453 protein-coding Fkbp3 FKBP prolyl isomerase 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955409 16810934 16824380 + 102007864 AGCD01009743;AGCD01009744;GBDF01000475;XM_005376860 XP_005376917 MODEL 8873519 protein-coding Proc protein C, inactivator of coagulation factors Va and VIIIa ENCODES a protein that exhibits identical protein binding (ortholog); oligopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN liver development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of blood coagulation (ortholog); PARTICIPATES IN coagulation cascade pathway; protease mediated signaling via protease-activated receptor 1; protein C anticoagulant pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955459 3097229 3105566 - 102004570 AGCD01048008;GBDJ01271470;XM_005397611;XM_005397612;XM_005397613;XM_005397614;XM_013521066;XM_013521067 XP_005397668;XP_005397669;XP_005397670;XP_005397671;XP_013376520;XP_013376521 MODEL 8716075 protein-coding B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) ENCODES a protein that exhibits galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity (ortholog); N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955448 11556179 11583556 - 102006843 AGCD01041528;GBCB01129821;GBCE01169869;XM_005393126;XM_005393128;XM_013518678;XM_013518679;XM_013518680 XP_005393183;XP_005393185;XP_013374132;XP_013374133;XP_013374134 MODEL 8745120 ncrna LOC102022516 uncharacterized LOC102022516 NW_004955425 24875518 24899720 - 102022516 AGCD01025896;AGCD01025897;AGCD01025898;GBDF01146023;XR_261169 MODEL 8837504 pseudo LOC102012245 eukaryotic translation initiation factor 5 pseudogene NW_004955542 1250369 1252115 - 102012245 AGCD01071498 MODEL 10093894 protein-coding Plvap plasmalemma vesicle associated protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN developmental process (ortholog); MAPK cascade (ortholog); positive regulation of cellular extravasation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); DIARRHEA 10, PROTEIN-LOSING ENTEROPATHY TYPE (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955524 885245 895552 + 106146320 AGCD01068722;AGCD01068723;GBCQ01008248;XM_013507239 XP_013362693 MODEL 8863301 protein-coding LOC102014173 interferon alpha-inducible protein 27, mitochondrial NW_004955438 16133933 16141370 + 102014173 AGCD01035395;GBDK01002841;XM_013517200;XM_013517201;XM_013517202;XM_013517203 XP_013372654;XP_013372655;XP_013372656;XP_013372657 MODEL 9053982 protein-coding Ccdc136 coiled-coil domain containing 136 INVOLVED IN acrosome assembly (ortholog); single fertilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog) NW_004955479 9601121 9627763 + 102029859 AGCD01056484;AGCD01056485;GBCB01075696;GBDF01209212;XM_013503296;XM_013503297;XM_013503298 XP_013358750;XP_013358751;XP_013358752 MODEL 8946485 protein-coding Sox11 SRY-box transcription factor 11 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN closure of optic fissure (ortholog); cornea development in camera-type eye (ortholog); embryonic digestive tract morphogenesis (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 2678961 2680869 - 102014907 AGCD01059264;XM_005404366 XP_005404423 MODEL 9042999 protein-coding Dnai2 dynein axonemal intermediate chain 2 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ciliary Motility Disorders (ortholog); Kartagener syndrome (ortholog); FOUND IN 9+2 motile cilium (ortholog); axonemal dynein complex (ortholog); axoneme (ortholog) NW_004955553 1188279 1212053 + 102006501 AGCD01072872;GBDF01087219;XM_005412227;XM_005412229;XM_013508632;XM_013508633 XP_005412284;XP_005412286;XP_013364086;XP_013364087 MODEL 39134102 misc_rna 7SK 7SK RNA 8765869 protein-coding Ap1g2 adaptor related protein complex 1 subunit gamma 2 ASSOCIATED WITH hepatocellular carcinoma (ortholog); thymoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); endosome membrane (ortholog); Golgi membrane (ortholog) NW_004955409 36795351 36803605 + 102017429 AGCD01010481;GBDJ01312856;XM_005377065;XM_005377066 XP_005377122;XP_005377123 MODEL 8765433 protein-coding Cebpz CCAAT enhancer binding protein zeta ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955441 5013144 5033830 - 102003285 AGCD01036867;GBDF01251981;XM_005390868 XP_005390925 MODEL 9020287 protein-coding Adgrd2 adhesion G protein-coupled receptor D2 ASSOCIATED WITH polycystic ovary syndrome (ortholog) NW_004955419 3656533 3678452 - 102024231 AGCD01019732;AGCD01019733;GBDF01177352;GBDF01303845;XM_013513083 XP_013368537 MODEL 8961613 protein-coding Brcc3 BRCA1/BRCA2-containing complex subunit 3 ENCODES a protein that exhibits enzyme regulator activity (ortholog); K63-linked deubiquitinase activity (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); chromatin remodeling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955594 551407 613772 - 102024964 AGCD01076434;AGCD01076435;GBCB01038463;XM_013509990;XM_013509991 XP_013365444;XP_013365445 MODEL 39133970 misc_rna 7SK 7SK RNA 8790647 pseudo LOC102013453 gamma-aminobutyric acid receptor-associated protein pseudogene NW_004955442 14455390 14458901 - 102013453 AGCD01037821 MODEL 8808610 protein-coding Atox1 antioxidant 1 copper chaperone ENCODES a protein that exhibits ATPase binding (ortholog); copper chaperone activity (ortholog); copper ion binding (ortholog); INVOLVED IN copper ion export (ortholog); copper ion transport (ortholog); intracellular copper ion homeostasis (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); Chronic Hepatitis (ortholog) NW_004955408 6156334 6168423 - 102023557 AGCD01008164;GBDF01002335;XM_005376170 XP_005376227 MODEL 39134244 misc_rna 7SK 7SK RNA 8837384 protein-coding LOC102004985 olfactory receptor 7G2-like NW_004955563 363283 413390 - 102004985 AGCD01074063;AGCD01074064;AGCD01074065;AGCD01074066;XM_013509126 XP_013364580 MODEL 8782075 pseudo LOC102011017 60S ribosomal protein L7 pseudogene NW_004955423 15037609 15043726 + 102011017 AGCD01023788;AGCD01023789 MODEL 8906178 protein-coding Clk1 CDC like kinase 1 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 655808 665007 + 102002977 AGCD01001702;AGCD01001703;GBBH01031976;XM_005373237;XM_013511835;XM_013511838 XP_005373294;XP_013367289;XP_013367292 MODEL 8705810 protein-coding Cysrt1 cysteine rich tail 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); establishment of skin barrier (ortholog); FOUND IN cornified envelope (ortholog) NW_004955513 5223124 5224650 + 102010396 AGCD01066963;GBDI01327324;XM_005408604 XP_005408661 MODEL 8725928 protein-coding Arhgap1 Rho GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); negative regulation of endocytic recycling (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Developmental Disabilities (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 1378426 1395439 + 102003771 AGCD01022457;GBDF01122966;XM_005384008;XM_013514064 XP_005384065;XP_013369518 MODEL 8986037 ncrna LOC102004620 uncharacterized LOC102004620 NW_004955497 6989452 7027099 - 102004620 AGCD01062651;AGCD01062652;AGCD01062653;AGCD01062654;GBBH01127272;XR_001231442;XR_001231443;XR_001231444 MODEL 8771131 ncrna LOC102013813 uncharacterized LOC102013813 NW_004955468 8103085 8110282 - 102013813 AGCD01052020;GBDF01192334;XR_001236949;XR_263405 MODEL 8743639 protein-coding Aif1 allograft inflammatory factor 1 ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcohol-Induced Disorders, Nervous System (ortholog); Alzheimer's disease (ortholog); FOUND IN actin filament (ortholog); cell projection (ortholog); cytoplasm (ortholog) NW_004955437 157509 158919 + 102013966 AGCD01034106;GBCE01030227;XM_005389329 XP_005389386 MODEL 8869965 protein-coding Acrbp acrosin binding protein INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); extracellular region (ortholog) NW_004955413 4251608 4262095 - 102024780 AGCD01013604;GBCQ01012794;XM_005378808 XP_005378865 MODEL 8762565 protein-coding Ccdc137 coiled-coil domain containing 137 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955506 1425874 1433741 - 102029882 AGCD01065263;GBDI01078469;XM_005407266;XM_013506051 XP_005407323;XP_013361505 MODEL 8840693 protein-coding Sh2d2a SH2 domain containing 2A INVOLVED IN cell population proliferation (ortholog); PARTICIPATES IN Erk5 MAPK signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955545 2881954 2891021 - 102010633 AGCD01071927;GBBH01050829;XM_005411705;XM_005411707;XM_005411708;XM_005411709;XM_005411712;XM_013508210 XP_005411762;XP_005411764;XP_005411765;XP_005411766;XP_005411769;XP_013363664 MODEL 8780747 protein-coding LOC102008677 deoxynucleotidyltransferase terminal-interacting protein 2-like NW_004955572 1393253 1395378 - 102008677 AGCD01074950;XM_013509439 XP_013364893 MODEL 9019225 ncrna LOC102003199 uncharacterized LOC102003199 NW_004955405 11281717 11443213 - 102003199 AGCD01004830;AGCD01004831;AGCD01004832;AGCD01004833;GBDJ01324103;XR_001235325;XR_001235327;XR_001235329 MODEL 39134103 misc_rna 7SK 7SK RNA 8895400 ncrna LOC102009847 uncharacterized LOC102009847 NW_004955487 8288681 8301499 - 102009847 AGCD01059432;AGCD01059433;GBDF01084799;XR_263988 MODEL 8738868 protein-coding LOC102006044 uncharacterized LOC102006044 NW_004955423 26874436 26882443 - 102006044 AGCD01024108;GBDJ01373506;XM_013514385 XP_013369839 MODEL 8966494 protein-coding Cfap73 cilia and flagella associated protein 73 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955482 9486245 9493876 + 102007997 AGCD01057573;AGCD01057574;GBBH01003993;GBBH01004004;XM_013503588;XM_013503589;XM_013503590 XP_013359042;XP_013359043;XP_013359044 MODEL 8709129 protein-coding Wdr89 WD repeat domain 89 INVOLVED IN corpus callosum development (ortholog); ventricular system development (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955466 6171553 6204818 + 102007319 AGCD01050912;AGCD01050913;AGCD01050914;GBDF01276584;XM_005399148;XM_005399149;XM_005399150;XM_005399151;XM_013522006;XM_013522007 XP_005399205;XP_005399206;XP_005399207;XP_005399208;XP_013377460;XP_013377461 MODEL 9043097 pseudo LOC102010252 60S ribosomal protein L35a pseudogene NW_004955475 5564528 5564859 + 102010252 AGCD01054922 MODEL 8994313 pseudo LOC102018434 60S ribosomal protein L9 pseudogene NW_004955436 21412782 21413746 + 102018434 AGCD01034053 MODEL 8939439 protein-coding LOC102008301 zinc finger protein 527 NW_004955468 1868700 1887881 + 102008301 AGCD01051785;GBDF01117493;XM_005399918;XM_013522318 XP_005399975;XP_013377772 MODEL 8746835 pseudo LOC102007162 protein Red-like NW_004955565 2044877 2054593 - 102007162 AGCD01074340 MODEL 9042515 protein-coding LOC102012249 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955546 2009351 2010344 + 102012249 AGCD01072081;XM_013508417 XP_013363871 MODEL 8792815 protein-coding Rtkn rhotekin ENCODES a protein that exhibits GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of apoptotic process (ortholog); Rho protein signal transduction (ortholog); signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955424 11344504 11358344 + 102027998 AGCD01024564;GBCB01061023;XM_005385506;XM_005385507;XM_005385508;XM_005385509;XM_013514740 XP_005385563;XP_005385564;XP_005385565;XP_005385566;XP_013370194 MODEL 8840955 protein-coding Plxdc1 plexin domain containing 1 INVOLVED IN spinal cord development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); extracellular region (ortholog) NW_004955451 13982443 14028235 - 102019131 AGCD01043519;AGCD01043520;AGCD01043521;AGCD01043522;GBBH01005598;GBCQ01054931;XM_013519432 XP_013374886 MODEL 8919274 protein-coding Cdc26 cell division cycle 26 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); sarcoma (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955419 14206167 14218487 + 102025009 AGCD01020013;AGCD01020014;AGCD01020015;GBDF01157852;XM_005382682;XM_005382683;XM_005382684;XM_013513138 XP_005382739;XP_005382740;XP_005382741;XP_013368592 MODEL 8860548 protein-coding Abcc3 ATP binding cassette subfamily C member 3 ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); canalicular bile acid transport (ortholog); leukotriene transport (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; etoposide pharmacodynamics pathway; etoposide pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955451 11087246 11130108 - 102003194 AGCD01043342;GBDJ01086374;XM_005394128;XM_005394129 XP_005394185;XP_005394186 MODEL 8878470 ncrna LOC102004265 uncharacterized LOC102004265 NW_004955413 25404187 25406406 - 102004265 AGCD01014405;GBDK01344235;XR_260113 MODEL 8870073 protein-coding Slc39a7 solute carrier family 39 member 7 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN B cell differentiation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); intracellular zinc ion homeostasis (ortholog); ASSOCIATED WITH agammaglobulinemia 9 (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 1774301 1778092 + 102027785 AGCD01034233;GBDF01119218;XM_005389473;XM_013516972 XP_005389530;XP_013372426 MODEL 9046410 protein-coding Ap1m1 adaptor related protein complex 1 subunit mu 1 INVOLVED IN endosome to melanosome transport (ortholog); melanosome organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN synapse (ortholog) NW_004955524 1345125 1360869 - 102030117 AGCD01068745;AGCD01068746;AGCD01068747;AGCD01068748;GBCB01023140;GBCE01032136;XM_013507334 XP_013362788 MODEL 9029130 protein-coding Dnai3 dynein axonemal intermediate chain 3 ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); INVOLVED IN negative regulation of Arp2/3 complex-mediated actin nucleation (ortholog); negative regulation of cell migration (ortholog); positive regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH Encephalocele (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog); FOUND IN axonemal dynein complex (ortholog); cytoplasm (ortholog) NW_004955423 8870877 8928070 - 102025701 AGCD01023645;GBBH01089896;XM_005385141 XP_005385198 MODEL 8703793 pseudo LOC102011867 josephin-1-like NW_004955417 14417553 14418271 + 102011867 AGCD01018204 MODEL 8839034 protein-coding Amn amnion associated transmembrane protein ENCODES a protein that exhibits cargo receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); cobalamin transport (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); anemia (ortholog); diarrhea (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955538 2017476 2021890 + 102015146 AGCD01071094;AGCD01071095;GBCQ01008311;GBDF01250836;XM_005410890 XP_005410947 MODEL 8801295 ncrna LOC102013456 uncharacterized LOC102013456 NW_004955559 488549 488991 + 102013456 AGCD01073587;GBDF01109206;XR_264993 MODEL 8747218 protein-coding Fkbp4 FKBP prolyl isomerase 4 ENCODES a protein that exhibits ATP binding (ortholog); copper-dependent protein binding (ortholog); GTP binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); copper ion transport (ortholog); embryo implantation (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH androgen insensitivity syndrome (ortholog); FOUND IN axonal growth cone (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955429 18334939 18344530 + 102021997 AGCD01028899;AGCD01028900;GBDF01005695;XM_005387116 XP_005387173 MODEL 8769955 protein-coding B3galnt2 beta-1,3-N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); congenital muscular dystrophy-dystroglycanopathy type A11 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955492 4472585 4502704 + 102023273 AGCD01060722;AGCD01060723;GBCB01023657;GBDF01252979;XM_013504679 XP_013360133 MODEL 39131895 rrna 5S_rRNA 5S ribosomal RNA 8994407 protein-coding LOC102022522 olfactory receptor 5M3-like NW_004955511 1626694 1627645 - 102022522 AGCD01066377;XM_013506375 XP_013361829 MODEL 8722127 protein-coding Proca1 protein interacting with cyclin A1 ENCODES a protein that exhibits cyclin binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955481 4451649 4461296 + 102024675 AGCD01056941;AGCD01056942;GBBH01155525;XM_005402725;XM_005402726;XM_005402728;XM_005402729;XM_005402730;XM_005402731;XM_005402733;XM_005402736;XM_005402737;XM_013503392;XM_013503393;XM_013503394;XM_013503395;XM_013503396;XM_013503397;XM_013503398 XP_005402782;XP_005402783;XP_005402785;XP_005402786;XP_005402787;XP_005402788;XP_005402790;XP_005402793;XP_005402794;XP_013358846;XP_013358847;XP_013358848;XP_013358849;XP_013358850;XP_013358851;XP_013358852 MODEL 8726235 protein-coding LOC102014181 olfactory receptor 4K14-like NW_004955550 359157 360092 + 102014181 AGCD01072495;XM_005412030 XP_005412087 MODEL 8719535 protein-coding Erich2 glutamate rich 2 NW_004955449 4013473 4040524 - 102023213 AGCD01041872;GBBH01000968;XM_005393243;XM_013518737;XM_013518738;XM_013518739;XM_013518740;XM_013518741;XM_013518742;XM_013518743 XP_005393300;XP_013374191;XP_013374192;XP_013374193;XP_013374194;XP_013374195;XP_013374196;XP_013374197 MODEL 8729739 protein-coding Reep1 receptor accessory protein 1 ENCODES a protein that exhibits microtubule binding (ortholog); olfactory receptor binding (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); protein insertion into membrane (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant distal hereditary motor neuronopathy 12 (ortholog); autosomal dominant distal hereditary motor neuronopathy 5 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 1369490 1425611 + 102018107 AGCD01024237;GBCE01013291;XM_013514719 XP_013370173 MODEL 8704283 protein-coding Clk2 CDC like kinase 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN negative regulation of gluconeogenesis (ortholog); regulation of RNA splicing (ortholog); response to ionizing radiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955545 1716294 1727187 - 102006076 AGCD01071869;GBCE01054181;XM_005411600;XM_005411602;XM_013508341 XP_005411657;XP_005411659;XP_013363795 MODEL 8755608 ncrna LOC102013457 uncharacterized LOC102013457 NW_004955567 1568026 1577962 + 102013457 AGCD01074483;AGCD01074484;GBDF01014518;XR_265032 MODEL 9043028 ncrna LOC102007536 uncharacterized LOC102007536 NW_004955468 11575980 11579208 - 102007536 AGCD01052135;GBDF01249875;XR_263412;XR_263413 MODEL 8961721 ncrna LOC102004621 uncharacterized LOC102004621 NW_004955505 1555708 1583604 - 102004621 AGCD01064974;AGCD01064975;GBDF01014944;XR_001231574;XR_264301 MODEL 8707504 protein-coding C8a complement C8 alpha chain ENCODES a protein that exhibits complement binding (ortholog); protein-containing complex binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955464 2806859 2874444 - 102023240 AGCD01049965;AGCD01049966;XM_005398770 XP_005398827 MODEL 8801941 protein-coding Adgre1 adhesion G protein-coupled receptor E1 INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell periphery (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955495 2601413 2674738 - 102030546 AGCD01061788;AGCD01061789;AGCD01061790;AGCD01061791;AGCD01061792;AGCD01061793;GBBH01172386;GBBH01172387;XM_013505356 XP_013360810 MODEL 39133971 misc_rna 7SK 7SK RNA 8911710 protein-coding Cecr2 cat eye syndrome chromosome region, candidate 2 ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); cochlea development (ortholog); execution phase of apoptosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anencephaly (ortholog); autistic disorder (ortholog); FOUND IN CERF complex (ortholog); euchromatin (ortholog); ISWI-type complex (ortholog) NW_004955454 5581985 5643685 + 102027812 AGCD01045176;AGCD01045177;AGCD01045178;AGCD01045179;GBDF01016427;XM_013520238;XM_013520239;XM_013520240;XM_013520241;XM_013520243;XM_013520244 XP_013375692;XP_013375693;XP_013375694;XP_013375695;XP_013375697;XP_013375698 MODEL 8971050 protein-coding Rtkn2 rhotekin 2 INVOLVED IN adaptive immune response (ortholog); hemopoiesis (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955425 15484287 15563535 - 102020354 AGCD01025582;AGCD01025583;AGCD01025584;AGCD01025585;AGCD01025586;GBDF01039332;XM_005385949;XM_005385950;XM_013514864 XP_005386006;XP_005386007;XP_013370318 MODEL 8803342 protein-coding Il5 interleukin 5 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-5 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-4 signaling pathway; interleukin-5 signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); allergic asthma (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 3937128 3951784 - 102029937 AGCD01008083;GBDK01154528;XM_005376103;XR_001231944 XP_005376160 MODEL 9062199 ncrna LOC102008678 uncharacterized LOC102008678 NW_004955449 1311463 1320185 + 102008678 AGCD01041795;AGCD01041796;GBCB01051011;XR_001235820;XR_001235821;XR_262484 MODEL 8701984 protein-coding Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 INVOLVED IN regulation of postsynaptic density assembly (ortholog); regulation of presynapse assembly (ortholog); synaptic membrane adhesion (ortholog); FOUND IN cell surface (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955422 18524786 18527916 - 102027866 AGCD01022950;GBBH01150721;XM_005384362 XP_005384419 MODEL 9020565 ncrna LOC102004986 uncharacterized LOC102004986 NW_004955445 2051400 2053337 + 102004986 AGCD01039349;GBDF01234218;XR_262295 MODEL 39134248 misc_rna 7SK 7SK RNA 8800273 protein-coding Atp10a ATPase phospholipid transporting 10A (putative) ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); glycosylceramide flippase activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN positive regulation of membrane tubulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); phospholipid-translocating ATPase complex (ortholog) NW_004955533 3413607 3533834 + 102004971 AGCD01070420;AGCD01070421;AGCD01070422;GBBH01209305;GBDF01088495;XM_005410422 XP_005410479 MODEL 9002121 trna Trnat-ugu transfer RNA threonine (anticodon UGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955530;NW_004955550;NW_004955431;NW_004955550;NW_004955550 130485;1411138;19443004;1499781;1425424 130557;1411210;19443075;1499853;1425496 +;-;+;+;- 101978812 AGCD01030449;AGCD01069830;AGCD01072566;AGCD01072577 MODEL 39131755 rrna 5S_rRNA 5S ribosomal RNA 8897185 ncrna LOC102010253 uncharacterized LOC102010253 NW_004955415 31218654 31219403 - 102010253 AGCD01016671;GBDF01001956;XR_260330 MODEL 8858584 protein-coding Cystm1 cysteine rich transmembrane module containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955418 415703 475796 - 102010694 AGCD01018675;AGCD01018676;GBDI01021426;XM_005382046 XP_005382103 MODEL 39131896 rrna 5S_rRNA 5S ribosomal RNA 9063625 protein-coding LOC102007164 zinc finger protein 709-like NW_004955569 1445074 1480352 + 102007164 AGCD01074655;AGCD01074656;GBDF01080557;XM_013509372;XM_013509373 XP_013364826;XP_013364827 MODEL 8717760 protein-coding LOC102008303 zinc finger protein 419-like NW_004955468 4251476 4270784 + 102008303 AGCD01051903;AGCD01051904;GBCE01148167;XM_005400012;XM_013522366 XP_005400069;XP_013377820 MODEL 8904931 protein-coding Sh2d3a SH2 domain containing 3A ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955495 2758214 2769867 + 102003978 AGCD01061799;GBDJ01075053;XM_005405690;XM_005405691;XM_005405692;XM_005405693;XM_005405694 XP_005405747;XP_005405748;XP_005405749;XP_005405750;XP_005405751 MODEL 8730705 protein-coding Ccdc138 coiled-coil domain containing 138 NW_004955470 12249279 12305099 + 102006335 AGCD01052925;AGCD01052926;GBCE01123158;GBDF01082256;XM_013522754;XM_013522755 XP_013378208;XP_013378209 MODEL 8772776 protein-coding Acrv1 acrosomal vesicle protein 1 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955412 26654980 26664989 - 102023570 AGCD01013204;AGCD01013205;GBDF01010364;XM_013510946;XM_013510947;XM_013510948 XP_013366400;XP_013366401;XP_013366402 MODEL 9012055 protein-coding Plxdc2 plexin domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nuclear body (ortholog) NW_004955429 8141253 8566927 - 102021693 AGCD01028617;AGCD01028618;AGCD01028619;AGCD01028620;AGCD01028621;AGCD01028622;GBCE01053820;XM_005386938 XP_005386995 MODEL 9041553 ncrna LOC102003205 uncharacterized LOC102003205 NW_004955454 12305249 12309122 - 102003205 AGCD01045408;XR_262790 MODEL 9051145 protein-coding Cdc27 cell division cycle 27 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); metaphase/anaphase transition of mitotic cell cycle (ortholog); neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955478 9927871 10002020 + 102010582 AGCD01056109;AGCD01056110;AGCD01056111;GBDF01085978;XM_005402251;XM_005402252;XM_005402253;XM_013503141;XM_013503142;XM_013503143 XP_005402308;XP_005402309;XP_005402310;XP_013358595;XP_013358596;XP_013358597 MODEL 8967288 pseudo LOC102006045 60S ribosomal protein L31 pseudogene NW_004955495 3574458 3577550 + 102006045 AGCD01061862;XM_005406145 MODEL 39133972 misc_rna 7SK 7SK RNA 8756577 protein-coding Abcc4 ATP binding cassette subfamily C member 4 (PEL blood group) ENCODES a protein that exhibits ABC-type 3',5'-cyclic GMP transmembrane transporter activity (ortholog); ABC-type bile acid transporter activity (ortholog); ABC-type glutathione S-conjugate transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); cAMP transport (ortholog); cilium assembly (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; lamivudine pharmacokinetics pathway; mercaptopurine pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); external side of apical plasma membrane (ortholog) NW_004955404 14700808 14927944 + 102025647 AGCD01003520;AGCD01003521;AGCD01003522;AGCD01003523;GBCB01100077;GBCQ01064634;XM_005374108;XM_005374109 XP_005374165;XP_005374166 MODEL 9065111 ncrna LOC102011020 uncharacterized LOC102011020 NW_004955497 1318649 1323855 + 102011020 AGCD01062456;GBCB01078283;XR_264191 MODEL 8957493 protein-coding Wdr90 WD repeat domain 90 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955442 16534951 16552856 - 102020724 AGCD01037901;GBDF01080193;XM_005391622;XM_013517761;XM_013517762;XR_001235382 XP_005391679;XP_013373215;XP_013373216 MODEL 8792509 pseudo LOC102018445 heparan sulfate 2-O-sulfotransferase 1 pseudogene NW_004955569 1146936 1151749 + 102018445 AGCD01074643 MODEL 39134249 misc_rna 7SK 7SK RNA 8874550 protein-coding Cfap74 cilia and flagella associated protein 74 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) NW_004955486 9056836 9107572 + 102011773 AGCD01059161;AGCD01059162;GBDF01054014;XM_005404188;XM_013504226;XM_013504227;XM_013504228;XM_013504229;XM_013504230;XM_013504231;XM_013504232;XM_013504233;XM_013504234;XM_013504235;XM_013504236;XM_013504237;XM_013504238;XR_001231114;XR_001231115;XR_001231116 XP_005404245;XP_013359680;XP_013359681;XP_013359682;XP_013359683;XP_013359684;XP_013359685;XP_013359686;XP_013359687;XP_013359688;XP_013359689;XP_013359690;XP_013359691;XP_013359692 MODEL 8755022 protein-coding Arhgap10 Rho GTPase activating protein 10 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog) NW_004955471 2757063 3052565 + 102022381 AGCD01053046;AGCD01053047;AGCD01053048;AGCD01053049;AGCD01053050;AGCD01053051;AGCD01053052;GBDF01214681;XM_013522864 XP_013378318 MODEL 8964248 protein-coding Aif1l allograft inflammatory factor 1 like ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); focal adhesion (ortholog) NW_004955513 936889 954667 + 102018519 AGCD01066837;GBCQ01004723;XM_005408351;XM_005408353 XP_005408408;XP_005408410 MODEL 8816720 protein-coding LOC102014185 carbonic anhydrase 15-like NW_004955442 18940328 18943376 + 102014185 AGCD01038024;GBCQ01098976;XM_005391793;XM_005391795;XM_005391796;XM_005391797 XP_005391850;XP_005391852;XP_005391853;XP_005391854 MODEL 8978721 protein-coding Brd1 bromodomain containing 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of erythrocyte differentiation (ortholog); response to electrical stimulus (ortholog); response to immobilization stress (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); bipolar disorder (ortholog); FOUND IN chromosome (ortholog); dendrite (ortholog); histone H3-K14 acetyltransferase complex (ortholog) NW_004955413 32935827 32973820 - 102016580 AGCD01014652;GBDK01189055;XM_005379525;XM_005379526;XM_013511532 XP_005379582;XP_005379583;XP_013366986 MODEL 8750241 protein-coding LOC102007537 apolipoprotein L3-like NW_004955413 22864060 22868517 - 102007537 AGCD01014318;XM_013511300 XP_013366754 MODEL 9028195 protein-coding Clk3 CDC like kinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955450 3250169 3262977 - 102012262 AGCD01042426;GBBH01118346;XM_005393551;XM_005393552;XM_005393553 XP_005393608;XP_005393609;XP_005393610 MODEL 39134104 misc_rna 7SK 7SK RNA 8903297 ncrna LOC102004269 uncharacterized LOC102004269 NW_004955469 7286277 7287635 + 102004269 AGCD01052412;AGCD01052413;GBDF01308355;XR_263434 MODEL 9003686 protein-coding Adgre3 adhesion G protein-coupled receptor E3 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955495 2512391 2565069 - 102029758 AGCD01061781;AGCD01061782;GBBH01189687;XM_005405683;XM_005405684;XM_013505366;XM_013505367 XP_005405740;XP_005405741;XP_013360820;XP_013360821 MODEL 8927681 protein-coding Slc39a8 solute carrier family 39 member 8 ENCODES a protein that exhibits monoatomic cation:bicarbonate symporter activity (ortholog); zinc:bicarbonate symporter activity (ortholog); INVOLVED IN arginine metabolic process (ortholog); bicarbonate transport (ortholog); cadmium ion transmembrane transport (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); congenital disorder of glycosylation type IIn (ortholog); Developmental Disabilities (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); lysosomal membrane (ortholog) NW_004955496 6016727 6106965 + 102019081 AGCD01062360;AGCD01062361;AGCD01062362;GBCQ01124663;GBDI01181151;XM_013505413;XM_013505414 XP_013360867;XP_013360868 MODEL 8745834 protein-coding Sox12 SRY-box transcription factor 12 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of regulatory T cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); spinal cord development (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955597 225796 229350 + 102026174 AGCD01076548;GBCB01087162;XM_013510026 XP_013365480 MODEL 8717993 protein-coding Rtl1 retrotransposon Gag like 1 INVOLVED IN angiogenesis (ortholog); embryonic placenta development (ortholog); gene expression (ortholog); FOUND IN Z disc (ortholog) NW_004955538 177078 181557 - 102020050 AGCD01070991;XM_005410721 XP_005410778 MODEL 8852590 pseudo LOC102009062 kinesin-associated protein 3-like NW_004955420 7992286 7995293 - 102009062 AGCD01020709 MODEL 8886306 ncrna LOC102006049 uncharacterized LOC102006049 NW_004955425 7368402 7403190 + 102006049 AGCD01025384;GBDF01196098;XR_001234261;XR_001234262;XR_001234263;XR_001234264 MODEL 8909645 protein-coding LOC102011869 butyrophilin subfamily 1 member A1-like NW_004955483 371694 378761 - 102011869 AGCD01057606;AGCD01057607;XM_013503804 XP_013359258 MODEL 8889639 protein-coding B3galt1 beta-1,3-galactosyltransferase 1 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN glucosylceramide metabolic process (ortholog); oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955449 6452189 7007329 - 102007167 AGCD01041956;AGCD01041957;AGCD01041958;AGCD01041959;AGCD01041960;AGCD01041961;AGCD01041962;AGCD01041963;AGCD01041964;AGCD01041965;AGCD01041966;AGCD01041967;AGCD01041968;GBCB01088572;XM_005393281;XM_005393282;XM_013518796;XR_001235825 XP_005393338;XP_005393339;XP_013374250 MODEL 8903208 protein-coding Abcc5 ATP binding cassette subfamily C member 5 ENCODES a protein that exhibits ABC-type 3',5'-cyclic GMP transmembrane transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN cAMP transport (ortholog); cGMP transport (ortholog); export across plasma membrane (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); endosome membrane (ortholog) NW_004955420 23447920 23522732 + 102027859 AGCD01021248;GBDI01227093;XM_005383351;XM_005383352;XM_005383353;XM_005383354;XM_013513528 XP_005383408;XP_005383409;XP_005383410;XP_005383411;XP_013368982 MODEL 8883953 protein-coding LOC102013462 uncharacterized LOC102013462 NW_004955402 4568211 4580597 + 102013462 AGCD01000124;AGCD01000125;GBBH01104032;XM_013518141 XP_013373595 MODEL 8708958 protein-coding CYTB cytochrome b MT 14163 15302 + 15822234 JX312692 AFQ55789;YP_008080757 REVIEWED 9038031 protein-coding LOC102004626 olfactory receptor 5B2-like NW_004955511 3096845 3097774 - 102004626 AGCD01066442;XM_013506380 XP_013361834 MODEL 8802237 protein-coding Dnai4 dynein axonemal intermediate chain 4 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN axonemal dynein complex (ortholog); axoneme (ortholog); motile cilium (ortholog) NW_004955423 24027924 24089914 + 102018507 AGCD01024028;AGCD01024029;AGCD01024030;GBBH01032835;GBDI01017375;XM_013514439 XP_013369893 MODEL 39131427 protein-coding CEL carboxyl ester lipase 8839711 protein-coding LOC102007165 arylacetamide deacetylase-like NW_004955448 3194027 3221003 - 102007165 AGCD01041312;AGCD01041313;GBCC01001426;XM_005393039 XP_005393096 MODEL 8955807 protein-coding Ccdc14 coiled-coil domain containing 14 INVOLVED IN protein localization to centrosome (ortholog); substantia nigra development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) NW_004955427 23043001 23095201 - 102016295 AGCD01027479;AGCD01027480;GBDF01159186;XM_005386532;XM_013515232 XP_005386589;XP_013370686 MODEL 8780071 protein-coding Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of macrophage activation (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cell surface (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955409 19710527 19969984 - 102013391 AGCD01009880;AGCD01009881;AGCD01009882;AGCD01009883;AGCD01009884;AGCD01009885;AGCD01009886;AGCD01009887;AGCD01009888;AGCD01009889;GBCE01047829;XM_005376880;XM_005376881;XM_013510459;XM_013510460;XM_013510461;XM_013510462 XP_005376937;XP_005376938;XP_013365913;XP_013365914;XP_013365915;XP_013365916 MODEL 8779538 pseudo LOC102022523 anaphase-promoting complex subunit 10 pseudogene NW_004955431 2848411 2848968 + 102022523 AGCD01029941;XR_261443 MODEL 8866688 protein-coding Il5ra interleukin 5 receptor subunit alpha ENCODES a protein that exhibits interleukin-5 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-5 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); asthma (ortholog) NW_004955421 10211594 10259760 + 102021980 AGCD01021870;AGCD01021871;AGCD01021872;GBDF01113547;XM_005383750 XP_005383807 MODEL 8730835 pseudo LOC102012250 bromodomain-containing protein 7-like NW_004955441 5921864 5922609 - 102012250 AGCD01036892 MODEL 8987697 protein-coding Procr protein C receptor INVOLVED IN negative regulation of coagulation (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 1; protein C anticoagulant pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN centrosome (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955422 26215757 26220396 - 102014795 AGCD01023281;AGCD01023282;GBBH01160494;GBDK01431932;XM_013514115 XP_013369569 MODEL 8970210 pseudo LOC102011021 TATA box-binding protein-associated factor RNA polymerase I subunit D pseudogene NW_004955502 102213 103039 + 102011021 AGCD01064232 MODEL 8948599 protein-coding Cel carboxyl ester lipase ENCODES a protein that exhibits acetylesterase activity (ortholog); glycosphingolipid binding (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN ceramide catabolic process (ortholog); intestinal cholesterol absorption (ortholog); pancreatic juice secretion (ortholog); ASSOCIATED WITH chronic pancreatitis (ortholog); diabetes mellitus (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955513 2324025 2382877 + 102006377 AGCD01066873;AGCD01066874;AGCD01066875;AGCD01066876;AGCD01066877;AGCD01066878;GBDF01235380;XM_005408407;XM_005408408 XP_005408464;XP_005408465 MODEL 39134250 misc_rna 7SK 7SK RNA 39131898 rrna 5S_rRNA 5S ribosomal RNA 8888759 protein-coding LOC102010255 deleted in malignant brain tumors 1 protein NW_004955477 966067 1052359 + 102010255 AGCD01055497;AGCD01055498;AGCD01055499;AGCD01055500;AGCD01055501;AGCD01055502;GBDF01198016;XM_013503021 XP_013358475 MODEL 8986910 pseudo LOC102009848 transcription elongation factor B polypeptide 1 pseudogene NW_004955489 234222 234732 + 102009848 AGCD01059787 MODEL 8796332 protein-coding Trnau1ap tRNA selenocysteine 1 associated protein 1 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 7645715 7663165 + 102017838 AGCD01044179;AGCD01044180;GBDF01189732;XM_005394958 XP_005395015 MODEL 8736725 pseudo LOC102008308 40S ribosomal protein SA pseudogene NW_004955414 6235311 6236262 - 102008308 AGCD01014914;XR_260239 MODEL 9008652 protein-coding Ap1m2 adaptor related protein complex 1 subunit mu 2 ENCODES a protein that exhibits clathrin-cargo adaptor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955495 1759247 1768479 - 102007671 AGCD01061725;AGCD01061726;GBDI01176729;XM_005405606;XM_013505143 XP_005405663;XP_013360597 MODEL 8961738 protein-coding Brd10 bromodomain containing 10 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955434 9904255 9991651 - 102005499 AGCD01032314;AGCD01032315;AGCD01032316;GBCQ01124872;GBDJ01028811;XM_013516351 XP_013371805 MODEL 8827671 protein-coding Sh2d3c SH2 domain containing 3C ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955419 891133 921062 + 102026425 AGCD01019621;AGCD01019622;AGCD01019623;GBDF01146187;XM_005382410 XP_005382467 MODEL 8884616 protein-coding Acsbg1 acyl-CoA synthetase bubblegum family member 1 ENCODES a protein that exhibits long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN long-chain fatty acid biosynthetic process (ortholog); long-chain fatty acid metabolic process (ortholog); ovarian follicle atresia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenoleukodystrophy (ortholog); demyelinating disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955450 703874 744782 - 102008164 AGCD01042343;GBDF01052909;XM_005393441;XM_013518893;XM_013518894 XP_005393498;XP_013374347;XP_013374348 MODEL 8810339 pseudo LOC102003206 cysteine and histidine-rich domain-containing protein 1-like NW_004955407 13581947 13582930 - 102003206 AGCD01007151 MODEL 8781192 protein-coding LOC102004988 boophilin-H2-like NW_004955445 11800937 11812508 - 102004988 AGCD01039717;GBCE01062671;XM_005392424 XP_005392481 MODEL 39134105 misc_rna 7SK 7SK RNA 8897032 protein-coding LOC102004271 olfactory receptor 51G2-like NW_004955414 20963996 20965027 - 102004271 AGCD01015398;XM_005380489 XP_005380546 MODEL 8861847 protein-coding C8b complement C8 beta chain ENCODES a protein that exhibits protein-containing complex binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955464 2754655 2796423 + 102022897 AGCD01049965;GBDJ01208068;XM_013521573 XP_013377027 MODEL 39133973 misc_rna 7SK 7SK RNA 8815816 pseudo LOC102013815 tetraspanin-9-like NW_004955413 1101938 1110529 + 102013815 AGCD01013511 MODEL 9050020 protein-coding Brd2 bromodomain containing 2 ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); histone H3K14ac reader activity (ortholog); histone H4K12ac reader activity (ortholog); INVOLVED IN chromatin looping (ortholog); neural tube closure (ortholog); positive regulation of T-helper 17 cell lineage commitment (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); B-cell lymphoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955437 1584890 1592486 + 102024381 AGCD01034219;GBCB01001835;XM_005389461 XP_005389518 MODEL 39131756 rrna 5S_rRNA 5S ribosomal RNA 8838711 protein-coding Erich3 glutamate rich 3 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955423 18009243 18110340 + 102028651 AGCD01023866;GBDI01375173;XM_005385238;XM_005385239 XP_005385295;XP_005385296 MODEL 9045366 ncrna LOC102018451 uncharacterized LOC102018451 NW_004955402 60136650 60151376 + 102018451 AGCD01001579;AGCD01001580;XR_259112 MODEL 8815794 protein-coding Wdr91 WD repeat domain 91 ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); regulation of protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) NW_004955494 7441880 7470174 + 102013426 AGCD01061552;GBDF01015655;XM_005405487;XM_005405488 XP_005405544;XP_005405545 MODEL 8945436 protein-coding Reep2 receptor accessory protein 2 ENCODES a protein that exhibits taste receptor binding (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); protein transport into membrane raft (ortholog); sensory perception of bitter taste (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); genetic disease (ortholog); hereditary spastic paraplegia 5A (ortholog); FOUND IN cytoplasmic microtubule (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955418 2018891 2024545 - 102026866 AGCD01018739;GBCE01152326;XM_005382101;XM_005382102;XM_005382103 XP_005382158;XP_005382159;XP_005382160 MODEL 8842774 protein-coding Cfap77 cilia and flagella associated protein 77 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955513 1834654 1951827 + 102027216 AGCD01066865;GBBH01031293;XM_005408380 XP_005408437 MODEL 8705993 ncrna LOC102014188 uncharacterized LOC102014188 NW_004955448 18347215 18360566 + 102014188 AGCD01041746;GBCQ01112525;XR_262479 MODEL 8861967 protein-coding Amn1 antagonist of mitotic exit network 1 homolog ASSOCIATED WITH lung squamous cell carcinoma (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN microvillus membrane (ortholog) NW_004955505 3840570 3897720 - 102029095 AGCD01065060;AGCD01065061;AGCD01065062;AGCD01065063;AGCD01065064;AGCD01065065;AGCD01065066;GBCE01186433;GBDF01010691;XM_013505959 XP_013361413 MODEL 9041652 pseudo LOC102008680 wiskott-Aldrich syndrome protein family member 1 pseudogene NW_004955403 9508735 9510324 + 102008680 AGCD01001908 MODEL 9013310 ncrna LOC102010258 uncharacterized LOC102010258 NW_004955416 28137227 28141716 + 102010258 AGCD01017625;GBDF01281711;XR_260429 MODEL 9044461 protein-coding LOC102013464 cyclin-dependent kinase inhibitor 1C-like NW_004958204 12 1007 - 102013464 AGCD01081600;GBBH01041050;GBCQ01066908;XM_005415240 XP_005415297 MODEL 8775586 protein-coding LOC102007543 tripartite motif-containing protein 5-like NW_004955414 21602756 21610062 - 102007543 AGCD01015424;XM_013511732 XP_013367186 MODEL 8948495 protein-coding Plxna1 plexin A1 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in salivary gland branching (ortholog); gonadotrophin-releasing hormone neuronal migration to the hypothalamus (ortholog); neuron projection extension (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955429 16482821 16522978 - 102030554 AGCD01028833;GBBH01185809;XM_013515479;XM_013515480 XP_013370933;XP_013370934 MODEL 8773040 protein-coding Clk4 CDC like kinase 4 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955408 1726283 1747314 + 102010028 AGCD01007975;AGCD01007976;GBBH01031978;GBCC01000229;XM_013508000 XP_013363454 MODEL 8883413 protein-coding Fkbp5 FKBP prolyl isomerase 5 ENCODES a protein that exhibits heat shock protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); protein folding (ortholog); response to alcohol (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955437 3445515 3548874 - 102029005 AGCD01034318;AGCD01034319;AGCD01034320;AGCD01034321;GBDI01261071;XM_005389562;XM_013516903;XM_013516904 XP_005389619;XP_013372357;XP_013372358 MODEL 8837252 protein-coding Dnai7 dynein axonemal intermediate chain 7 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN axonemal dynein complex (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955413 20227807 20287211 - 102028947 AGCD01014212;GBDI01218967;XM_005379097;XM_013511446;XM_013511447;XM_013511448 XP_005379154;XP_013366900;XP_013366901;XP_013366902 MODEL 8903703 protein-coding Slc39a9 solute carrier family 39 member 9 ENCODES a protein that exhibits androgen binding (ortholog); G protein-coupled receptor activity (ortholog); zinc efflux transmembrane transporter activity (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); intracellular zinc ion homeostasis (ortholog); regulation of cellular response to testosterone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955466 901813 960153 - 102028515 AGCD01050682;AGCD01050683;AGCD01050684;AGCD01050685;GBCQ01067034;XM_005399036;XM_013521986;XM_013521987 XP_005399093;XP_013377440;XP_013377441 MODEL 8891858 protein-coding Rtl4 retrotransposon Gag like 4 INVOLVED IN cognition (ortholog); norepinephrine metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955490 3403958 3497789 - 102029300 AGCD01060166;AGCD01060167;AGCD01060168;GBDF01086720;XM_013504514 XP_013359968 MODEL 8766280 pseudo LOC102009073 uncharacterized LOC102009073 NW_004955422 6052412 6078239 - 102009073 AGCD01022588;AGCD01022589 MODEL 9019408 protein-coding Sox13 SRY-box transcription factor 13 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN gamma-delta T cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 39959458 39994214 + 102016667 AGCD01006649;AGCD01006650;GBCE01186528;XM_005375280;XM_005375281;XM_013522670 XP_005375337;XP_005375338;XP_013378124 MODEL 8745259 protein-coding Arhgap11a Rho GTPase activating protein 11A ENCODES a protein that exhibits GTPase activator activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955416 1916475 1936404 - 102028413 AGCD01016841;GBDI01338615;XM_005381178;XM_013512665 XP_005381235;XP_013368119 MODEL 8971519 pseudo LOC102006050 nicotinamide phosphoribosyltransferase-like NW_004955426 5308768 5326304 - 102006050 AGCD01026121 MODEL 8916355 ncrna LOC102022525 uncharacterized LOC102022525 NW_004955513 4826030 4833311 - 102022525 AGCD01066940;GBDK01062957;XR_001231759;XR_264480 MODEL 8985394 protein-coding Lrg1 leucine rich alpha-2-glycoprotein 1 ENCODES a protein that exhibits transforming growth factor beta receptor binding (ortholog); type I transforming growth factor beta receptor binding (ortholog); type II transforming growth factor beta receptor binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); keratinocyte migration (ortholog); leukocyte adhesion to vascular endothelial cell (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Colonic Neoplasms (ortholog); Drug Hypersensitivity Syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 4402670 4405666 + 102007244 AGCD01061922;GBBH01012150;XM_005405791 XP_005405848 MODEL 8748469 protein-coding Ccdc141 coiled-coil domain containing 141 INVOLVED IN brain development (ortholog); centrosome localization (ortholog); cerebral cortex radially oriented cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955403 17850119 18032722 + 102024633 AGCD01002088;AGCD01002089;AGCD01002090;AGCD01002091;AGCD01002092;AGCD01002093;GBDJ01246173;XM_013512594 XP_013368048 MODEL 8843430 protein-coding B3galt2 beta-1,3-galactosyltransferase 2 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN glucosylceramide metabolic process (ortholog); oligosaccharide biosynthetic process (ortholog) NW_004955406 30603238 30610822 - 102021090 AGCD01006377;GBCE01083240;XM_005375108 XP_005375165 MODEL 8813455 protein-coding Aifm1 apoptosis inducing factor mitochondria associated 1 ENCODES a protein that exhibits DNA binding (ortholog); FAD binding (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to aldosterone (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial inner membrane (ortholog) NW_004955473 4891955 4925705 + 102008718 AGCD01053962;GBDF01250246;XM_005401243;XM_005401244 XP_005401300;XP_005401301 MODEL 39134251 misc_rna 7SK 7SK RNA 8821423 protein-coding Erich4 glutamate rich 4 ASSOCIATED WITH thymoma (ortholog) NW_004955555 369918 373848 + 102018655 AGCD01073025;AGCD01073026;GBDI01212353;XM_005412351;XR_001232313 XP_005412408 MODEL 8715297 pseudo LOC102004631 quinone oxidoreductase-like protein 2 NW_004955432 19214738 19226859 - 102004631 AGCD01031171;AGCD01031172;AGCD01031173;AGCD01031174 MODEL 8742920 ncrna LOC102010261 uncharacterized LOC102010261 NW_004955482 6580525 6586861 - 102010261 AGCD01057403;XR_263839 MODEL 8996258 ncrna LOC102003208 uncharacterized LOC102003208 NW_004955407 34429774 34446403 + 102003208 AGCD01007721;AGCD01007722;GBDF01176950;XR_259606 MODEL 8754672 trna Trnav-aac transfer RNA valine (anticodon AAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978798 AGCD01020530;AGCD01050590;AGCD01050597;AGCD01050600;AGCD01057602;AGCD01069830;AGCD01071614 MODEL 8887921 ncrna LOC102004989 uncharacterized LOC102004989 NW_004955445 15824960 15826502 + 102004989 AGCD01039857;GBDF01080622;XR_262340 MODEL 9031139 protein-coding C9 complement C9 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN cell killing (ortholog); complement activation (ortholog); complement activation, GZMK pathway (ortholog); ASSOCIATED WITH age related macular degeneration 15 (ortholog); autosomal dominant polycystic kidney disease (ortholog); complement component 9 deficiency (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955426 23790792 23824117 - 102010603 AGCD01026656;AGCD01026657;AGCD01026658;XM_013514935 XP_013370389 MODEL 8827225 pseudo LOC102011874 cytochrome c-type heme lyase pseudogene NW_004955489 679288 680097 - 102011874 AGCD01059812 MODEL 8699845 protein-coding Prodh2 proline dehydrogenase 2 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-NH group of donors (ortholog); oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor (ortholog); proline dehydrogenase activity (ortholog); INVOLVED IN trans-4-hydroxy-L-proline catabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955468 2747870 2754621 + 102017216 AGCD01051834;AGCD01051835;GBCQ01009142;XM_005399947 XP_005400004 MODEL 8720223 protein-coding Cdc34 cell division cycle 34, ubiquitin conjugating enzyme ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); positive regulation of inclusion body assembly (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955495 7170419 7178093 - 102024252 AGCD01062123;GBDF01155493;GBDJ01006834;XM_005406038 XP_005406095 MODEL 9001268 protein-coding Abcc6 ATP binding cassette subfamily C member 6 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN ATP metabolic process (ortholog); ATP transport (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Angina Pectoris (ortholog); angioid streaks (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955442 865292 921739 - 102028136 AGCD01037429;AGCD01037430;GBCQ01155383;XM_005391081 XP_005391138 MODEL 8847762 protein-coding Wdr93 WD repeat domain 93 ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955416 15472866 15527853 - 102026636 AGCD01017332;AGCD01017333;AGCD01017334;AGCD01017335;GBDF01045871;XM_005381546;XM_005381547;XM_013512549;XM_013512550 XP_005381603;XP_005381604;XP_013368003;XP_013368004 MODEL 8820927 protein-coding Cyth1 cytohesin 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955506 3920803 3997012 + 102005281 AGCD01065321;AGCD01065322;AGCD01065323;AGCD01065324;GBBH01209744;XM_005407370;XM_013506064;XM_013506065 XP_005407427;XP_013361518;XP_013361519 MODEL 9043072 pseudo LOC102008312 60S ribosomal protein L7 pseudogene NW_004955479 9952660 9953327 - 102008312 AGCD01056510 MODEL 8963431 ncrna LOC102013467 uncharacterized LOC102013467 NW_004955404 29028733 29038238 + 102013467 AGCD01003968;GBDF01118402;XR_001235108 MODEL 8842976 ncrna LOC102007168 uncharacterized LOC102007168 NW_004955592 171448 185769 + 102007168 AGCD01076300;AGCD01076301;GBDK01432229;XR_265130 MODEL 8896792 protein-coding Reep3 receptor accessory protein 3 INVOLVED IN mitotic nuclear membrane reassembly (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955425 16633900 16689549 + 102026234 AGCD01025615;AGCD01025616;AGCD01025617;GBDJ01126439;XM_013514852;XM_013514853;XM_013514854 XP_013370306;XP_013370307;XP_013370308 MODEL 8933148 protein-coding LOC102007544 seminal plasma acrosin inhibitor A1-like NW_004955415 5997416 6041627 + 102007544 AGCD01016005;AGCD01016006;AGCD01016007;AGCD01016008;AGCD01016009;GBDJ01337989;XM_005380645;XM_005380648;XM_005380649;XM_013512381;XM_013512382;XM_013512383;XM_013512384;XM_013512385 XP_005380702;XP_005380705;XP_005380706;XP_013367835;XP_013367836;XP_013367837;XP_013367838;XP_013367839 MODEL 8944925 protein-coding Ap1s1 adaptor related protein complex 1 subunit sigma 1 INVOLVED IN response to virus (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH bilirubin metabolic disorder (ortholog); cervical cancer (ortholog); Diarrhea 9 (ortholog); FOUND IN Golgi apparatus (ortholog); presynapse (ortholog); terminal bouton (ortholog) NW_004955456 16127877 16134039 - 102026945 AGCD01046690;GBCB01008302;XM_005396868;XM_005396869 XP_005396925;XP_005396926 MODEL 39134106 misc_rna 7SK 7SK RNA 8818471 protein-coding Atp10b ATPase phospholipid transporting 10B (putative) ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); glycosylceramide flippase activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN lysosomal membrane organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); late endosome membrane (ortholog) NW_004955408 14495165 14815648 - 102028828 AGCD01008399;AGCD01008400;AGCD01008401;AGCD01008402;AGCD01008403;AGCD01008404;AGCD01008405;AGCD01008406;AGCD01008407;GBCQ01000712;XM_005376268;XM_005376269;XM_005376270 XP_005376325;XP_005376326;XP_005376327 MODEL 8780048 protein-coding Acsf2 acyl-CoA synthetase family member 2 ENCODES a protein that exhibits medium-chain fatty acid-CoA ligase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 11276385 11306873 - 102013369 AGCD01043345;AGCD01043346;AGCD01043347;AGCD01043348;GBBH01126803;XM_005394171;XM_013519093;XM_013519094 XP_005394228;XP_013374547;XP_013374548 MODEL 8766282 protein-coding Il6 interleukin 6 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); histone H3K9ac reader activity (ortholog); INVOLVED IN autocrine signaling (ortholog); bone remodeling (ortholog); branching involved in salivary gland morphogenesis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH otitis media; Acute Coronary Syndrome (ortholog); Acute Hepatitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); interleukin-6 receptor complex (ortholog) NW_004955410 25079835 25084390 + 102009154 AGCD01011140;GBDF01056731;XM_005377381 XP_005377438 MODEL 9050510 protein-coding LOC102013816 olfactory receptor 52B4-like NW_004955414 20062525 20063545 + 102013816 AGCD01015355;XM_005380043 XP_005380100 MODEL 8969408 pseudo LOC102011022 zinc finger protein 649-like NW_004955503 3712980 3714698 + 102011022 AGCD01064640 MODEL 8983925 protein-coding LOC102012257 lipopolysaccharide-binding protein NW_004955445 18358717 18389491 - 102012257 AGCD01039903;AGCD01039904;GBDJ01074877;XM_005392536;XR_001235614;XR_001235615;XR_001235616;XR_001235617;XR_262356 XP_005392593 MODEL 8934062 ncrna LOC102010262 uncharacterized LOC102010262 NW_004955482 9098479 9099552 - 102010262 AGCD01057562;GBDF01226253;XR_263851 MODEL 8760612 protein-coding LOC102018453 protocadherin alpha-11 NW_004955611 320712 330219 - 102018453 AGCD01077161;AGCD01077162;AGCD01077163;XM_005414947 XP_005415004 MODEL 39131899 rrna 5S_rRNA 5S ribosomal RNA 9004400 protein-coding Slc3a1 solute carrier family 3 member 1 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); protein heterodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN amino acid transport (ortholog); aspartate transmembrane transport (ortholog); gene expression (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955441 11381390 11418193 + 102003589 AGCD01037107;GBCQ01008312;XM_005390946 XP_005391003 MODEL 8733570 pseudo LOC102009854 cytochrome c oxidase assembly factor 5 pseudogene NW_004955424 27866525 27870117 - 102009854 AGCD01025137 MODEL 8738700 protein-coding Cela1 chymotrypsin like elastase 1 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN digestive system development (ortholog); elastin catabolic process (ortholog); exocrine pancreas development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955547 1810680 1823938 - 102025291 AGCD01072247;GBBH01071457;XM_005411908 XP_005411965 MODEL 8861831 pseudo LOC102022528 integral membrane protein GPR180 pseudogene NW_004955432 3205501 3206196 + 102022528 AGCD01030638 MODEL 8927590 protein-coding Sox14 SRY-box transcription factor 14 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN entrainment of circadian clock (ortholog); regulation of neuron migration (ortholog); visual perception (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955501 1155920 1157870 - 102016077 AGCD01064045;XM_005406773 XP_005406830 MODEL 9016964 protein-coding Amot angiomotin ENCODES a protein that exhibits angiostatin binding (ortholog); identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel endothelial cell migration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); cervical cancer (ortholog); FOUND IN actin filament (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) NW_004955490 2965899 3042541 + 102028425 AGCD01060156;GBCQ01015232;XM_005404628;XM_013504539;XM_013504540;XM_013504541;XM_013504542 XP_005404685;XP_013359993;XP_013359994;XP_013359995;XP_013359996 MODEL 8778525 protein-coding LOC102018455 actin-related protein T1-like NW_004955670 38169 39593 - 102018455 AGCD01077935;GBDF01251846;XM_005415068 XP_005415125 MODEL 8709348 protein-coding LOC102014190 E3 ubiquitin-protein ligase TRIM39 NW_004955583 454579 466005 + 102014190 AGCD01075825;GBBH01186352;GBCE01008619;XM_005414304;XM_013509782;XM_013509783 XP_005414361;XP_013365236;XP_013365237 MODEL 8799566 protein-coding Plxna2 plexin A2 ENCODES a protein that exhibits identical protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); centrosome localization (ortholog); cerebellar granule cell precursor tangential migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955489 3914137 4116780 + 102027310 AGCD01059895;AGCD01059896;AGCD01059897;GBCE01117243;GBDI01026905;XM_005404545 XP_005404602 MODEL 39133974 misc_rna 7SK 7SK RNA 8925710 protein-coding Clmn calmin INVOLVED IN negative regulation of cell population proliferation (ortholog); neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955438 17258145 17335443 + 102017815 AGCD01035437;AGCD01035438;AGCD01035439;GBBH01051082;XM_005390382;XM_005390383;XM_005390384;XM_013517199;XR_261944 XP_005390439;XP_005390440;XP_005390441;XP_013372653 MODEL 39131757 rrna 5S_rRNA 5S ribosomal RNA 8805325 protein-coding Wdr97 WD repeat domain 97 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955454 2769356 2778024 + 102023430 AGCD01045033;GBCB01051894;XM_005395848;XM_013520172;XM_013520173;XM_013520174;XM_013520175;XR_001236234 XP_005395905;XP_013375626;XP_013375627;XP_013375628;XP_013375629 MODEL 8872856 protein-coding Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 ENCODES a protein that exhibits ATPase activator activity (ortholog); C3HC4-type RING finger domain binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); flagellated sperm motility (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH galactosemia (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); microtubule cytoskeleton (ortholog) NW_004955472 2604002 2618033 - 102011980 AGCD01053478;AGCD01053479;AGCD01053480;GBDK01003789;XM_005401111 XP_005401168 MODEL 9040196 protein-coding LOC102004990 zinc finger protein 14-like NW_004955569 1305100 1342506 - 102004990 AGCD01074646;AGCD01074647;AGCD01074648;AGCD01074649;GBDI01011400;XM_013509371 XP_013364825 MODEL 8967462 protein-coding LOC102011879 spermatogenesis-associated protein 31E1-like NW_004955422 23602412 23608132 + 102011879 AGCD01023197;GBDK01288025;XM_005384703 XP_005384760 MODEL 8717189 protein-coding LOC102008682 plakophilin-2-like NW_004956130 12 5617 + 102008682 AGCD01079104;GBDK01128349;GBDK01128352;XM_005415169 XP_005415226 MODEL 39134252 misc_rna 7SK 7SK RNA 8978415 protein-coding B3galt4 beta-1,3-galactosyltransferase 4 ENCODES a protein that exhibits ganglioside galactosyltransferase activity (ortholog); N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog) NW_004955437 1839707 1840516 + 102010630 AGCD01034239;GBBH01117698;GBDF01155737;XM_005390114 XP_005390171 MODEL 9032136 protein-coding Arhgap12 Rho GTPase activating protein 12 INVOLVED IN actin filament organization (ortholog); morphogenesis of an epithelial sheet (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN glutamatergic synapse (ortholog); phagocytic cup (ortholog); postsynapse (ortholog) NW_004955429 23452880 23560948 - 102030222 AGCD01029068;AGCD01029069;AGCD01029070;AGCD01029071;AGCD01029072;GBCQ01067381;XM_013515440;XM_013515441;XM_013515442;XM_013515443;XM_013515444 XP_013370894;XP_013370895;XP_013370896;XP_013370897;XP_013370898 MODEL 8998574 protein-coding Lrguk leucine rich repeats and guanylate kinase domain containing INVOLVED IN axoneme assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); manchette (ortholog) NW_004955410 33753411 33870512 - 102004461 AGCD01011386;AGCD01011387;AGCD01011388;GBBH01180243;XM_005377538;XM_013510670;XM_013510671;XM_013510673 XP_005377595;XP_013366124;XP_013366125;XP_013366127 MODEL 8720125 protein-coding Sh2d4a SH2 domain containing 4A ENCODES a protein that exhibits phosphatase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955403 43111804 43170344 + 102020738 AGCD01002767;GBDK01136635;GBDK01136639;XM_005373614;XM_005373615 XP_005373671;XP_005373672 MODEL 8997938 protein-coding Erich5 glutamate rich 5 NW_004955417 13776609 13804241 + 102009607 AGCD01018191;GBDI01354833;XM_005381845;XM_005381846 XP_005381902;XP_005381903 MODEL 8957094 protein-coding Cdc37 cell division cycle 37, HSP90 cochaperone ENCODES a protein that exhibits heat shock protein binding (ortholog); Hsp90 protein binding (ortholog); kinase binding (ortholog); INVOLVED IN positive regulation of type 2 mitophagy (ortholog); post-transcriptional regulation of gene expression (ortholog); protein maturation (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); HSP90-CDC37 chaperone complex (ortholog) NW_004955495 1642467 1651288 - 102005609 AGCD01061709;GBCC01025637;XM_005405600;XM_013505167 XP_005405657;XP_013360621 MODEL 9031652 pseudo LOC102004632 protein DBF4 homolog A pseudogene NW_004955520 4533977 4536441 + 102004632 AGCD01068120 MODEL 8764958 ncrna LOC102008318 uncharacterized LOC102008318 NW_004955484 4122273 4129579 - 102008318 AGCD01058202;GBDF01081938;XR_263880;XR_263882 MODEL 8745286 pseudo LOC102003213 chromobox protein homolog 3 pseudogene NW_004955408 30983925 30997950 + 102003213 AGCD01008818;AGCD01008819 MODEL 39131524 protein-coding RTL5 retrotransposon Gag like 5 8902871 ncrna LOC102009080 uncharacterized LOC102009080 NW_004955502 7625008 7627557 + 102009080 AGCD01064452;GBDF01238432;XR_264267 MODEL 8896208 trna Trnav-cac transfer RNA valine (anticodon CAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978801 AGCD01050589;AGCD01052199;AGCD01057606;AGCD01061910;AGCD01069830;AGCD01076044;AGCD01080385 MODEL 8755918 protein-coding Fkbp6 FKBP prolyl isomerase family member 6 (inactive) ENCODES a protein that exhibits Hsp90 protein binding (ortholog); identical protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); piRNA processing (ortholog); positive regulation of viral genome replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure 77 (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955456 14291445 14318310 - 102029366 AGCD01046638;AGCD01046639;GBDF01051299;XM_005396786 XP_005396843 MODEL 8925185 protein-coding Atp10d ATPase phospholipid transporting 10D (putative) ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); glycosylceramide flippase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); phospholipid-translocating ATPase complex (ortholog) NW_004955443 972967 1072797 - 102027685 AGCD01038127;GBBH01114841;XM_005391891;XM_013518093 XP_005391948;XP_013373547 MODEL 9056345 ncrna LOC102011023 uncharacterized LOC102011023 NW_004955504 1257357 1259714 - 102011023 AGCD01064836;GBDF01264466;XR_264285 MODEL 8716221 ncrna LOC102012259 uncharacterized LOC102012259 NW_004955402 6847522 6850356 - 102012259 AGCD01000162;GBDF01162294;XR_001235451 MODEL 39131900 rrna 5S_rRNA 5S ribosomal RNA 8843904 protein-coding Adgre5 adhesion G protein-coupled receptor E5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955415 33007959 33021896 + 102013716 AGCD01016746;GBDF01088550;XM_005381091;XM_005381093;XM_013512170;XM_013512171;XM_013512172;XM_013512173 XP_005381148;XP_005381150;XP_013367624;XP_013367625;XP_013367626;XP_013367627 MODEL 8727037 protein-coding Ccdc142 coiled-coil domain containing 142 ASSOCIATED WITH dystonia (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog) NW_004955424 11304968 11312679 + 102025263 AGCD01024561;GBDK01233807;XM_005385496 XP_005385553 MODEL 8982386 protein-coding LOC102010274 cationic trypsin NW_004955494 1011732 1014914 - 102010274 AGCD01061390;XM_005405392 XP_005405449 MODEL 8844512 protein-coding Brd3 bromodomain containing 3 ENCODES a protein that exhibits histone H3K18cr reader activity (ortholog); histone H3K27cr reader activity (ortholog); histone H3K9cr reader activity (ortholog); INVOLVED IN endodermal cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955513 3145267 3164791 - 102023386 AGCD01066895;AGCD01066896;GBDK01134998;XM_013506673;XM_013506674;XM_013506675;XM_013506676 XP_013362127;XP_013362128;XP_013362129;XP_013362130 MODEL 8789688 ncrna LOC102004272 uncharacterized LOC102004272 NW_004955415 5517401 5522758 + 102004272 AGCD01015995;GBDK01393200;XR_260271 MODEL 9040054 pseudo LOC102022532 olfactory receptor 24-like NW_004955524 1445223 1447462 - 102022532 AGCD01068750 MODEL 8703608 protein-coding Sox15 SRY-box transcription factor 15 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation (ortholog); myoblast development (ortholog); negative regulation of striated muscle tissue development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955467 9333620 9335498 + 102008611 AGCD01051497;GBDI01384127;XM_005399474;XM_005399475 XP_005399531;XP_005399532 MODEL 8708772 protein-coding Amotl1 angiomotin like 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of cell polarity involved in ameboidal cell migration (ortholog); positive regulation of blood vessel endothelial cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); COP9 signalosome (ortholog) NW_004955605 113570 275921 - 102024076 AGCD01076930;AGCD01076931;AGCD01076932;AGCD01076933;AGCD01076934;AGCD01076935;AGCD01076936;AGCD01076937;AGCD01076938;GBCE01000888;XM_005414888;XM_005414889;XM_005414890;XM_005414891;XM_005414892;XM_013510098 XP_005414945;XP_005414946;XP_005414947;XP_005414948;XP_005414949;XP_013365552 MODEL 8868619 pseudo LOC102007169 N-acetylglucosamine-6-sulfatase pseudogene NW_004955402 44394601 44397598 - 102007169 AGCD01001113 MODEL 9022939 ncrna LOC102018460 uncharacterized LOC102018460 NW_004955452 939105 985800 - 102018460 AGCD01043828;GBDI01241145;XR_262631 MODEL 39134107 misc_rna 7SK 7SK RNA 39131311 protein-coding AP1S2 adaptor related protein complex 1 subunit sigma 2 8784974 protein-coding LOC102007547 cystatin-C-like NW_004955415 30648683 30672114 + 102007547 AGCD01016666;GBBH01008067;XM_005380977;XM_005380978;XM_013512401;XM_013512402;XM_013512403 XP_005381034;XP_005381035;XP_013367855;XP_013367856;XP_013367857 MODEL 9000017 protein-coding Reep4 receptor accessory protein 4 INVOLVED IN mitotic nuclear membrane reassembly (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955403 45627750 45631481 - 102003719 AGCD01002824;GBBH01051322;XM_005373648;XM_013513770 XP_005373705;XP_013369224 MODEL 8826539 protein-coding Acsf3 acyl-CoA synthetase family member 3 ENCODES a protein that exhibits malonyl-CoA synthetase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); malonate catabolic process (ortholog); ASSOCIATED WITH Arachnoid Cysts (ortholog); cervical cancer (ortholog); combined malonic and methylmalonic acidemia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955541 2837487 2876220 + 102008259 AGCD01071426;AGCD01071427;AGCD01071428;GBBH01117625;XM_005411031;XM_013507984;XM_013507986 XP_005411088;XP_013363438;XP_013363440 MODEL 8911878 pseudo LOC102006051 cyclin-G1 pseudogene NW_004955427 21210303 21211288 - 102006051 AGCD01027434 MODEL 39131758 rrna 5S_rRNA 5S ribosomal RNA 8770540 protein-coding Prok1 prokineticin 1 INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of MAPK cascade (ortholog); regulation of angiogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955435 13930897 13935335 + 102018967 AGCD01033212;XM_005388924 XP_005388981 MODEL 8856885 protein-coding Dnaja2 DnaJ heat shock protein family (Hsp40) member A2 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN carbon tetrachloride metabolic process (ortholog); protein refolding (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955474 8180995 8202169 + 102011534 AGCD01054544;AGCD01054545;GBDF01004147;XM_005401411 XP_005401468 MODEL 8822550 ncrna LOC102009857 uncharacterized LOC102009857 NW_004955425 20777011 20788476 - 102009857 AGCD01025762;AGCD01025763;GBDJ01354331;XR_261165;XR_261166 MODEL 8858068 protein-coding Il6r interleukin 6 receptor ENCODES a protein that exhibits ciliary neurotrophic factor binding (ortholog); ciliary neurotrophic factor receptor activity (ortholog); cytokine receptor activity (ortholog); INVOLVED IN autocrine signaling (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); ciliary neurotrophic factor receptor complex (ortholog) NW_004955545 932814 979359 + 102022428 AGCD01071826;AGCD01071827;AGCD01071828;AGCD01071829;AGCD01071830;GBBH01050791;XM_013508348;XM_013508349 XP_013363802;XP_013363803 MODEL 8921689 protein-coding Abcc8 ATP binding cassette subfamily C member 8 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to nutrient levels (ortholog); female pregnancy (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; altered insulin secretion pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); brain edema (ortholog); Brain Injuries (ortholog); FOUND IN inward rectifying potassium channel (ortholog); plasma membrane (ortholog); presynaptic membrane (ortholog) NW_004955414 32216243 32289028 - 102010794 AGCD01015777;GBDI01053758;XM_005380385;XM_005380386;XM_013512092;XM_013512093 XP_005380442;XP_005380443;XP_013367546;XP_013367547 MODEL 8976113 protein-coding Cela3b chymotrypsin like elastase 3B ASSOCIATED WITH cervical cancer (ortholog); exocrine pancreatic insufficiency (ortholog); uterine carcinosarcoma (ortholog) NW_004955452 2190177 2194453 + 102012274 AGCD01043880;GBBH01077125;XM_013519470 XP_013374924 MODEL 8802107 pseudo LOC102011882 thioredoxin pseudogene NW_004955494 7209430 7210242 - 102011882 AGCD01061546 MODEL 8918878 ncrna LOC102008684 uncharacterized LOC102008684 NW_004955403 54070872 54077075 - 102008684 AGCD01003087;GBDJ01213136;XR_001234164;XR_001234165;XR_001234166;XR_001234167;XR_001234168;XR_001234169;XR_001234171;XR_001234172;XR_001234173 MODEL 8874529 protein-coding Adgrf1 adhesion G protein-coupled receptor F1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cAMP (ortholog); memory (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955437 11744387 11772260 - 102011043 AGCD01034581;AGCD01034582;GBCQ01041145;XM_005389875;XM_013517104;XM_013517105;XM_013517106;XM_013517107 XP_005389932;XP_013372558;XP_013372559;XP_013372560;XP_013372561 MODEL 8870731 protein-coding Cfap90 cilia and flagella associated protein 90 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axoneme (ortholog); ciliary basal body (ortholog) NW_004955504 5380575 5395166 - 102024141 AGCD01064897;GBDF01044181;XM_013505891 XP_013361345 MODEL 8968540 protein-coding Sh2d4b SH2 domain containing 4B ASSOCIATED WITH cervical cancer (ortholog); sarcoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955510 506117 602140 + 102028881 AGCD01066151;AGCD01066152;AGCD01066153;AGCD01066154;AGCD01066155;AGCD01066156;AGCD01066157;GBCE01122178;XM_013506308 XP_013361762 MODEL 8893185 protein-coding C9orf72 C9orf72-SMCR8 complex subunit ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); autophagy (ortholog); axon extension (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autoimmune disease (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autolysosome (ortholog); autophagosome (ortholog) NW_004955472 7299092 7337591 + 102018919 AGCD01053618;AGCD01053619;AGCD01053620;GBDF01297009;XM_005401124;XM_005401125;XM_005401126;XM_013522996;XM_013522997 XP_005401181;XP_005401182;XP_005401183;XP_013378450;XP_013378451 MODEL 8908140 protein-coding Plxna3 plexin A3 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); facial nerve structural organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog) NW_004955580 958033 972123 + 102004213 AGCD01075633;AGCD01075634;GBBH01068132;XM_005414203 XP_005414260 MODEL 9029747 pseudo LOC102003214 graves disease carrier protein pseudogene NW_004955459 10102037 10104221 + 102003214 AGCD01048180 MODEL 8752614 protein-coding Clmp CXADR like cell adhesion molecule INVOLVED IN actin filament polymerization (ortholog); adherens junction assembly (ortholog); adipose tissue development (ortholog); ASSOCIATED WITH genetic disease (ortholog); intestinal pseudo-obstruction (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasmic microtubule (ortholog); postsynaptic membrane (ortholog) NW_004955412 23876003 23984603 - 102020098 AGCD01013100;AGCD01013101;AGCD01013102;AGCD01013103;AGCD01013104;GBBH01214681;GBDJ01129599;XM_005378375 XP_005378432 MODEL 8958421 ncrna LOC102007549 uncharacterized LOC102007549 NW_004955480 6536847 6538193 - 102007549 AGCD01056685;GBDJ01269916;XR_263745 MODEL 8769513 pseudo LOC102004991 UDP-glucuronosyltransferase 2B4-like NW_004955447 3992156 4014487 + 102004991 AGCD01040695;AGCD01040696;AGCD01040697;XM_005392810 MODEL 8849262 protein-coding Slc3a2 solute carrier family 3 member 2 ENCODES a protein that exhibits aromatic amino acid transmembrane transporter activity (ortholog); double-stranded RNA binding (ortholog); exogenous protein binding (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); cellular response to glucose starvation (ortholog); isoleucine transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN amino acid transport complex (ortholog); anchoring junction (ortholog); apical plasma membrane (ortholog) NW_004955599 376133 391434 - 102020181 AGCD01076642;AGCD01076643;GBBH01000426;GBDK01018077;XM_013510062 XP_013365516 MODEL 9038497 protein-coding Aifm2 AIF family member 2, ferroptosis suppressor ENCODES a protein that exhibits DNA binding (ortholog); electron-transferring-flavoprotein dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); cellular detoxification (ortholog); negative regulation of ferroptosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955437 21111298 21126487 + 102016636 AGCD01034898;GBDF01115627;XM_005390068;XM_005390069 XP_005390125;XP_005390126 MODEL 8945747 protein-coding LOC102012260 eukaryotic translation elongation factor 1 epsilon-1 NW_004955583 253526 254563 - 102012260 AGCD01075808;GBCC01054013;XM_005414299 XP_005414356 MODEL 8997946 protein-coding Cyth2 cytohesin 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); endosome organization (ortholog); negative regulation of dendrite development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN bicellular tight junction (ortholog); BLOC-1 complex (ortholog); cell body (ortholog) NW_004955559 2014740 2021234 - 102010101 AGCD01073686;GBDF01002920;XM_013509039;XM_013509040 XP_013364493;XP_013364494 MODEL 8971777 pseudo LOC102014192 calmodulin-alpha-like NW_004955588 210107 210570 + 102014192 AGCD01076095 MODEL 8971357 protein-coding B3galt5 beta-1,3-galactosyltransferase 5 INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH cervical cancer (ortholog); pancreatic cancer (ortholog); testicular germ cell cancer (ortholog) NW_004955407 38343581 38393408 + 102027045 AGCD01007804;AGCD01007805;GBDI01381461;XM_005375773;XM_005375774;XM_013504919;XM_013504924 XP_005375830;XP_005375831;XP_013360373;XP_013360378 MODEL 8879916 protein-coding Lrif1 ligand dependent nuclear receptor interacting factor 1 INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); facioscapulohumeral muscular dystrophy 3 (ortholog); FOUND IN Barr body (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955435 14467123 14485109 - 102021479 AGCD01033234;GBDJ01262130;XM_005388933;XM_005388935 XP_005388990;XP_005388992 MODEL 8806191 protein-coding Erich6 glutamate rich 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955448 1827296 1860699 - 102025958 AGCD01041270;GBDF01054023;XM_005393013;XM_013518579 XP_005393070;XP_013374033 MODEL 8989824 protein-coding LOC102004273 translation initiation factor IF-2 NW_004955474 427580 429704 + 102004273 AGCD01054218;GBBH01209537;XM_005401303 XP_005401360 MODEL 9017552 ncrna LOC102008323 uncharacterized LOC102008323 NW_004955421 4100911 4102982 - 102008323 AGCD01021680;GBDF01307160;XR_260787 MODEL 8852521 protein-coding Wdsub1 WD repeat, sterile alpha motif and U-box domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955449 14301798 14348735 + 102006968 AGCD01042164;GBDI01172204;XM_005393376;XM_005393377;XM_013518706;XM_013518707;XR_001235809 XP_005393433;XP_005393434;XP_013374160;XP_013374161 MODEL 8986253 ncrna LOC102013817 uncharacterized LOC102013817 NW_004955414 27566936 27572188 - 102013817 AGCD01015663;GBDI01167262;XR_001233114 MODEL 9024911 protein-coding Rtl5 retrotransposon Gag like 5 NW_004955475 11499717 11504438 - 102012191 AGCD01055154;GBDJ01165951;GBDK01005230;XM_005401683 XP_005401740 MODEL 15036841 trna Trnav-gac transfer RNA valine (anticodon GAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978799 39134253 misc_rna 7SK 7SK RNA 8963342 protein-coding Atp11a ATPase phospholipid transporting 11A ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylethanolamine flippase activity (ortholog); phosphatidylserine flippase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); positive regulation of myotube differentiation (ortholog); regulation of membrane lipid distribution (ortholog); ASSOCIATED WITH Autosomal Dominant Auditory Neuropathy 2 (ortholog); autosomal dominant nonsyndromic deafness 33 (ortholog); autosomal dominant nonsyndromic deafness 84 (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955404 820788 906531 - 102011941 AGCD01003212;AGCD01003213;AGCD01003214;GBCE01029356;XM_013515626;XM_013515632;XM_013515639;XM_013515641;XM_013515652;XM_013515654;XM_013515661;XM_013515663;XM_013515667;XR_001234554;XR_001234555 XP_013371080;XP_013371086;XP_013371093;XP_013371095;XP_013371106;XP_013371108;XP_013371115;XP_013371117;XP_013371121 MODEL 8840889 protein-coding Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); glycolipid binding (ortholog); sulfatide binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); action potential (ortholog); amino acid transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN autolysosome (ortholog); autophagosome (ortholog); caveola (ortholog) NW_004955493 6696520 6707849 - 102017676 AGCD01061130;AGCD01061131;GBDI01112983;XM_005405173 XP_005405230 MODEL 8791905 ncrna LOC102013469 uncharacterized LOC102013469 NW_004955405 26349233 26375138 + 102013469 AGCD01005201;GBDK01414416;XR_259396 MODEL 8947444 pseudo LOC102011024 cyclin-G1-like NW_004955505 3590543 3591876 + 102011024 AGCD01065032 MODEL 9044438 protein-coding Ccdc146 coiled-coil domain containing 146 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell population proliferation (ortholog); cilium organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955410 7810702 7925844 - 102012513 AGCD01010723;AGCD01010724;AGCD01010725;AGCD01010726;GBDI01290438;XM_013510513 XP_013365967 MODEL 8773914 protein-coding LOC102010275 fer-1-like protein 4 NW_004955422 25848531 25882747 + 102010275 AGCD01023269;GBCQ01116103;XM_013514202 XP_013369656 MODEL 9061083 pseudo LOC102022533 mitogen-activated protein kinase 1-like NW_004955524 298974 300265 + 102022533 AGCD01068675 MODEL 8747701 protein-coding Arhgap15 Rho GTPase activating protein 15 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cell shape (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955440 9591173 10182086 + 102016522 AGCD01036384;AGCD01036385;AGCD01036386;GBCE01021095;XM_005390780;XM_005390781;XM_013517486;XM_013517487 XP_005390837;XP_005390838;XP_013372940;XP_013372941 MODEL 9016485 protein-coding LOC102004635 uncharacterized LOC102004635 NW_004955524 2023272 2031552 + 102004635 AGCD01068792;GBDF01249148;XM_013507193 XP_013362647 MODEL 8884522 protein-coding Abcc9 ATP binding cassette subfamily C member 9 ENCODES a protein that exhibits ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN action potential (ortholog); ATP metabolic process (ortholog); blood circulation (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acne (ortholog); Ambras type hypertrichosis universalis congenita (ortholog); Apnea (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); inward rectifying potassium channel (ortholog) NW_004955413 17385966 17510220 - 102019791 AGCD01014150;AGCD01014151;AGCD01014152;AGCD01014153;AGCD01014154;AGCD01014155;AGCD01014156;GBDI01325169;XM_005379069;XM_013511594;XM_013511595;XM_013511596;XM_013511597;XM_013511598;XM_013511599;XM_013511600;XM_013511601;XM_013511602;XM_013511603 XP_005379126;XP_013367048;XP_013367049;XP_013367050;XP_013367051;XP_013367052;XP_013367053;XP_013367054;XP_013367055;XP_013367056;XP_013367057 MODEL 8781043 protein-coding Amotl2 angiomotin like 2 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN endothelial cell morphogenesis (ortholog); hippo signaling (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955501 4192339 4209150 + 102024137 AGCD01064115;GBDF01307407;XM_005406800;XM_013505791 XP_005406857;XP_013361245 MODEL 8773011 protein-coding LOC102007172 PRAME family member 23-like NW_004955608 264738 312943 - 102007172 AGCD01077020;AGCD01077021;AGCD01077022;AGCD01077023;AGCD01077024;AGCD01077025;AGCD01077026;AGCD01077027;XM_013510118 XP_013365572 MODEL 9015323 protein-coding LOC102018462 sperm-tail PG-rich repeat-containing protein 2 NW_004955405 7862288 8221282 - 102018462 AGCD01004722;AGCD01004723;AGCD01004724;AGCD01004725;AGCD01004726;AGCD01004727;AGCD01004728;AGCD01004729;AGCD01004730;AGCD01004731;AGCD01004732;AGCD01004733;AGCD01004734;AGCD01004735;GBDF01276672;XM_013517444 XP_013372898 MODEL 39134108 misc_rna 7SK 7SK RNA 8766081 protein-coding Cdc37l1 cell division cycle 37 like 1, HSP90 cochaperone ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955434 8969289 8996921 + 102026786 AGCD01032282;GBBH01089675;XM_005388645 XP_005388702 MODEL 9051121 protein-coding Ap1s2 adaptor related protein complex 1 subunit sigma 2 INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); neuromuscular process controlling balance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955519 2351754 2370650 + 102010189 AGCD01067925;AGCD01067926;AGCD01067927;AGCD01067928;GBCB01043995;GBDK01233175;XM_005409152 XP_005409209 MODEL 8794510 ncrna LOC102003217 uncharacterized LOC102003217 NW_004955410 22917245 22920183 + 102003217 AGCD01011087;GBDF01124788;XR_259857 MODEL 8860404 protein-coding Reep5 receptor accessory protein 5 INVOLVED IN endoplasmic reticulum membrane organization (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) NW_004955418 2504028 2539574 + 102024676 AGCD01018771;AGCD01018772;GBDJ01073123;GBDK01008237;XM_005382341 XP_005382398 MODEL 8817193 protein-coding Lrig1 leucine rich repeats and immunoglobulin like domains 1 INVOLVED IN hair cycle process (ortholog); innervation (ortholog); otolith morphogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955421 21108609 21219293 + 102006585 AGCD01022104;AGCD01022105;AGCD01022106;GBBH01065474;GBDJ01088361;XM_013513717 XP_013369171 MODEL 39131902 rrna 5S_rRNA 5S ribosomal RNA 8761964 protein-coding Acsl1 acyl-CoA synthetase long chain family member 1 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine palmitoyltransferase I deficiency pathway; carnitine-acylcarnitine translocase deficiency; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955403 24190674 24235354 + 102004133 AGCD01002270;AGCD01002271;GBCB01035722;XM_005373482;XM_013513016;XM_013513022 XP_005373539;XP_013368470;XP_013368476 MODEL 8940671 protein-coding LOC102006056 olfactory receptor 8J3-like NW_004955511 1507684 1508625 + 102006056 AGCD01066370;XM_005407964 XP_005408021 MODEL 9046582 protein-coding Plxna4 plexin A4 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog) NW_004955410 35281042 35714094 + 102006641 AGCD01011410;AGCD01011411;AGCD01011412;AGCD01011413;GBDF01057223;XM_005377544;XM_005377545;XM_013510647 XP_005377601;XP_005377602;XP_013366101 MODEL 8924526 protein-coding Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ENCODES a protein that exhibits ATP-dependent protein folding chaperone (ortholog); DNA-binding transcription factor binding (ortholog); GTPase regulator activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic process (ortholog); cellular senescence (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955442 12971031 13002605 - 102010950 AGCD01037753;GBCB01002868;XM_005391293;XM_005391294 XP_005391350;XP_005391351 MODEL 8881740 protein-coding Prok2 prokineticin 2 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chemotaxis (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); cervical cancer (ortholog) NW_004955421 16325519 16339458 + 102030322 AGCD01021998;GBDK01269636;XM_005383770;XM_005383771 XP_005383827;XP_005383828 MODEL 8985404 protein-coding Slc40a1 solute carrier family 40 member 1 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); identical protein binding (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN endothelium development (ortholog); intracellular iron ion homeostasis (ortholog); iron ion export across plasma membrane (ortholog); PARTICIPATES IN iron efflux pathway; ASSOCIATED WITH aceruloplasminemia (ortholog); anemia (ortholog); autistic disorder (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); synaptic vesicle (ortholog) NW_004955403 9253734 9271732 + 102007721 AGCD01001904;GBCE01003262;XM_005373321 XP_005373378 MODEL 39134254 misc_rna 7SK 7SK RNA 8737315 pseudo LOC102013471 poly(rC)-binding protein 2 pseudogene NW_004955405 1213036 1219942 - 102013471 AGCD01004598 MODEL 10211058 protein-coding Sox17 SRY-box transcription factor 17 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); cardiac cell fate determination (ortholog); cardiogenic plate morphogenesis (ortholog); ASSOCIATED WITH biliary atresia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955454 13689403 13690019 + 106149834 AGCD01045450;GBCE01132570;GBDK01360915;XM_013520252 XP_013375706 MODEL 8963075 protein-coding Ccdc148 coiled-coil domain containing 148 ASSOCIATED WITH amenorrhea (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955449 15154366 15271924 + 102029024 AGCD01042184;AGCD01042185;AGCD01042186;AGCD01042187;AGCD01042188;AGCD01042189;AGCD01042190;AGCD01042191;GBBH01121004;GBDF01254330;XM_013518715;XM_013518717;XM_013518718 XP_013374169;XP_013374171;XP_013374172 MODEL 8832307 pseudo LOC102011028 40S ribosomal protein S8 pseudogene NW_004955510 5851568 5852288 - 102011028 AGCD01066294 MODEL 8956268 protein-coding Erich6b glutamate rich 6B ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955518 3279721 3333159 - 102028567 AGCD01067798;AGCD01067799;GBDF01120562;XM_013506952 XP_013362406 MODEL 8811495 protein-coding Cfap91 cilia and flagella associated protein 91 INVOLVED IN axonemal central apparatus assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955427 19389866 19451136 + 102021464 AGCD01027366;AGCD01027367;AGCD01027368;AGCD01027369;AGCD01027370;AGCD01027371;AGCD01027372;AGCD01027373;GBDF01084601;XM_005386455;XM_005386456;XM_013515177 XP_005386512;XP_005386513;XP_013370631 MODEL 8813991 protein-coding Fkbp7 FKBP prolyl isomerase 7 ENCODES a protein that exhibits calcium ion binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955403 18373372 18385172 + 102026699 AGCD01002098;GBDF01188414;XM_005373377;XM_005373378 XP_005373434;XP_005373435 MODEL 39131759 rrna 5S_rRNA 5S ribosomal RNA 8957804 protein-coding Ca1 carbonic anhydrase 1 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); cyanamide hydratase activity (ortholog); INVOLVED IN response to fructose (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); adult respiratory distress syndrome (ortholog); chronic pancreatitis (ortholog) NW_004955417 3270619 3313261 - 102004162 AGCD01017911;GBBH01037140;XM_005381742;XM_005381743;XM_013512805;XM_013512806;XM_013512807;XM_013512808 XP_005381799;XP_005381800;XP_013368259;XP_013368260;XP_013368261;XP_013368262 MODEL 9044597 protein-coding Abcd1 ATP binding cassette subfamily D member 1 ENCODES a protein that exhibits ABC-type fatty-acyl-CoA transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); fatty acid biosynthetic process (ortholog); fatty acid elongation (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Adrenal Insufficiency (ortholog); adrenoleukodystrophy (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) NW_004955580 459715 475363 + 102016330 AGCD01075607;GBCQ01126666;XM_005414142;XM_013509678 XP_005414199;XP_013365132 MODEL 8921678 pseudo LOC102007550 thioredoxin pseudogene NW_004955417 25525969 25526425 + 102007550 AGCD01018486 MODEL 8721043 ncrna LOC102009858 uncharacterized LOC102009858 NW_004955426 4649998 4654801 + 102009858 AGCD01026105;GBDF01248724;XR_261189 MODEL 8959674 protein-coding Wdtc1 WD and tetratricopeptide repeats 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); glucose metabolic process (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog) NW_004955452 6519628 6581333 + 102028819 AGCD01044114;AGCD01044115;AGCD01044116;AGCD01044117;GBDF01050605;XM_005394896;XM_005394898 XP_005394953;XP_005394955 MODEL 8876170 trna Trnav-uac transfer RNA valine (anticodon UAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955586;NW_004955418;NW_004955511;NW_004955511 762475;25922316;4044144;4043788 762547;25922388;4044216;4043860 +;-;-;- 101978800 AGCD01019379;AGCD01066488;AGCD01076044 MODEL 8977572 ncrna LOC102008691 uncharacterized LOC102008691 NW_004955406 921242 942095 - 102008691 AGCD01005623;GBDF01120365;XR_001236178 MODEL 8748109 protein-coding LOC102003218 dimethylaniline monooxygenase [N-oxide-forming] 5-like NW_004955462 10184547 10214181 - 102003218 AGCD01049355;AGCD01049356;AGCD01049357;XM_005398324 XP_005398381 MODEL 8723360 ncrna LOC102011884 uncharacterized LOC102011884 NW_004955424 343712 352617 - 102011884 AGCD01024172;AGCD01024173;GBDF01052736;XR_261019 MODEL 8774558 protein-coding LOC102014195 alpha-fetoprotein-like NW_004955611 38479 41119 - 102014195 AGCD01077139;GBBH01032074;GBBH01032078;XM_005414938 XP_005414995 MODEL 8878475 ncrna LOC102004276 uncharacterized LOC102004276 NW_004955476 10952695 10958599 + 102004276 AGCD01055432;AGCD01055433;GBDF01093785;XR_001230793;XR_263644 MODEL 8943443 protein-coding Cyth3 cytohesin 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); Golgi vesicle transport (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955460 13439634 13492767 + 102023121 AGCD01048688;AGCD01048689;AGCD01048690;AGCD01048691;GBDF01181556;XM_013521212 XP_013376666 MODEL 8815042 protein-coding LOC102010276 uncharacterized LOC102010276 NW_004955494 4605410 4658564 - 102010276 AGCD01061508;AGCD01061509;XM_013504923 XP_013360377 MODEL 8936013 protein-coding Sh2d5 SH2 domain containing 5 ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN postsynaptic density (ortholog) NW_004955452 1240621 1252088 - 102022453 AGCD01043836;AGCD01043837;GBDF01145516;XM_005394691;XM_013519747;XM_013519748;XM_013519750;XM_013519751;XM_013519752;XM_013519753 XP_005394748;XP_013375201;XP_013375202;XP_013375204;XP_013375205;XP_013375206;XP_013375207 MODEL 8988504 protein-coding Ampd1 adenosine monophosphate deaminase 1 ENCODES a protein that exhibits AMP deaminase activity (ortholog); identical protein binding (ortholog); myosin heavy chain binding (ortholog); INVOLVED IN GMP salvage (ortholog); IMP salvage (ortholog); response to ATP (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Adenosine Monophosphate Deaminase Deficiency (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955435 17962487 17991625 - 102019839 AGCD01033379;AGCD01033380;AGCD01033381;GBCB01001199;XM_005389004;XM_005389005;XM_005389006 XP_005389061;XP_005389062;XP_005389063 MODEL 8928722 pseudo LOC102013820 fatty acyl-CoA reductase 1 pseudogene NW_004955414 15096465 15098121 - 102013820 AGCD01015176 MODEL 8830537 pseudo LOC102004994 U2 small nuclear ribonucleoprotein A' pseudogene NW_004955402 7571597 7573482 - 102004994 AGCD01000179;XR_259128 MODEL 39133975 misc_rna 7SK 7SK RNA 8950071 protein-coding Il6st interleukin 6 cytokine family signal transducer ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); ciliary neurotrophic factor receptor binding (ortholog); coreceptor activity (ortholog); INVOLVED IN autocrine signaling (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); Alzheimer's disease (ortholog); FOUND IN cell body (ortholog); ciliary neurotrophic factor receptor complex (ortholog); dendrite (ortholog) NW_004955446 11790636 11837734 + 102013983 AGCD01040212;AGCD01040213;GBDF01189975;GBDK01071858;XM_005392688 XP_005392745 MODEL 8912089 protein-coding Celf1 CUGBP Elav-like family member 1 ENCODES a protein that exhibits BRE binding (ortholog); lncRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN cellular response to polyamine macromolecule (ortholog); cerebral cortex development (ortholog); cerebral cortex neuron differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleoplasm (ortholog) NW_004955422 742017 817649 + 102019180 AGCD01022435;AGCD01022436;AGCD01022437;GBDF01120279;XM_005383961;XM_013514126;XM_013514127;XM_013514128;XM_013514129;XM_013514130;XM_013514131;XM_013514132;XM_013514133 XP_005384018;XP_013369580;XP_013369581;XP_013369582;XP_013369583;XP_013369584;XP_013369585;XP_013369586;XP_013369587 MODEL 8762685 protein-coding Reep6 receptor accessory protein 6 INVOLVED IN detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); fundus dystrophy (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955764 17640 22996 - 102005875 AGCD01078306;GBCE01186476;XM_005415097;XM_005415099;XM_005415100;XM_013510188 XP_005415154;XP_005415156;XP_005415157;XP_013365642 MODEL 8736946 protein-coding Prokr1 prokineticin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); Hyperalgesia (ortholog); long QT syndrome (ortholog) NW_004955424 16287666 16301713 - 102020460 AGCD01024738;GBDJ01323907;XM_005385662 XP_005385719 MODEL 8982958 protein-coding Lrig2 leucine rich repeats and immunoglobulin like domains 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN innervation (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN growth cone (ortholog); intracellular vesicle (ortholog); membrane (ortholog) NW_004955435 16468300 16522503 + 102010624 AGCD01033332;AGCD01033333;GBCQ01065493;XM_005388976 XP_005389033 MODEL 8999698 protein-coding Cln5 CLN5 lysosomal BMP synthase ENCODES a protein that exhibits bis(monoacylglycero)phosphate synthase activity (ortholog); D-mannose binding (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN brain development (ortholog); lysosomal lumen acidification (ortholog); lysosome organization (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); Dysarthria (ortholog); fundus dystrophy (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); lysosomal membrane (ortholog) NW_004955404 30229632 30235677 - 102019132 AGCD01004001;GBDF01146019;GBDK01284770;XM_005374163 XP_005374220 MODEL 9003451 protein-coding Atp11b ATPase phospholipid transporting 11B (putative) ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylserine floppase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955420 11588739 11681636 + 102024912 AGCD01020824;AGCD01020825;AGCD01020826;AGCD01020827;GBDF01046603;GBDF01046604;XM_013513429;XM_013513430;XM_013513431;XM_013513432;XM_013513433;XM_013513434;XM_013513435;XM_013513436 XP_013368883;XP_013368884;XP_013368885;XP_013368886;XP_013368887;XP_013368888;XP_013368889;XP_013368890 MODEL 8757362 pseudo LOC102009081 transcription factor CP2-like protein 1 pseudogene NW_004955503 2232097 2233831 + 102009081 AGCD01064604 MODEL 8983844 protein-coding Dnaja4 DnaJ heat shock protein family (Hsp40) member A4 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of endothelial cell migration (ortholog); negative regulation of inclusion body assembly (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955450 757485 771033 + 102008481 AGCD01042344;GBDF01000161;XM_005393442 XP_005393499 MODEL 8909167 protein-coding Aifm3 AIF family member 3 INVOLVED IN execution phase of apoptosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955442 19334217 19346438 - 102022641 AGCD01038052;GBDF01149481;XM_005391824;XM_005391825;XM_005391827;XM_005391828;XM_005391831 XP_005391881;XP_005391882;XP_005391884;XP_005391885;XP_005391888 MODEL 9061525 protein-coding Adgrf2 adhesion G protein-coupled receptor F2 INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); gene expression (ortholog); ASSOCIATED WITH autistic disorder (ortholog) NW_004955437 12104938 12126649 + 102012684 AGCD01034597;AGCD01034598;GBCC01011063;XM_005389877 XP_005389934 MODEL 9035655 pseudo LOC102022536 melanoma-associated antigen B10-like NW_004955531 3135227 3136118 - 102022536 AGCD01070062 MODEL 9026084 pseudo LOC102004637 TBC1 domain family member 12 pseudogene NW_004955435 21292150 21303948 - 102004637 AGCD01033474;AGCD01033475 MODEL 8833138 protein-coding LOC102013474 translation initiation factor IF-2-like NW_004955407 18942404 19075796 + 102013474 AGCD01007290;AGCD01007291;AGCD01007292;AGCD01007293;AGCD01007294;GBDF01304388;XM_013505824 XP_013361278 MODEL 9036983 ncrna LOC102014202 uncharacterized LOC102014202 NW_004955404 1262946 1265247 + 102014202 AGCD01003223;GBDF01087339;XR_001235125;XR_259285 MODEL 8962566 protein-coding LOC102007173 translation initiation factor IF-2-like NW_004955451 5638379 5640035 + 102007173 AGCD01043171;GBDF01005683;XM_013519255 XP_013374709 MODEL 8906053 protein-coding Rtl6 retrotransposon Gag like 6 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); substance-related disorder (ortholog) NW_004955413 29238719 29244112 - 102024106 AGCD01014578;AGCD01014579;GBDF01123354;GBDJ01085414;XM_005379464 XP_005379521 MODEL 39134109 misc_rna 7SK 7SK RNA 151707871 protein-coding BRD3OS BRD3 opposite strand 8904424 protein-coding Erlec1 endoplasmic reticulum lectin 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); endoplasmic reticulum quality control compartment (ortholog); Hrd1p ubiquitin ligase complex (ortholog) NW_004955441 19535425 19557960 + 102003697 AGCD01037349;AGCD01037350;AGCD01037351;AGCD01037352;GBBH01065712;GBDJ01003705;XM_013517526 XP_013372980 MODEL 9000410 protein-coding Cdc40 cell division cycle 40 INVOLVED IN embryonic brain development (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955411 34966797 35007577 + 102021861 AGCD01012418;GBDF01222886;XM_005377882 XP_005377939 MODEL 39131760 rrna 5S_rRNA 5S ribosomal RNA 8735079 ncrna LOC102012261 uncharacterized LOC102012261 NW_004955450 975310 979893 + 102012261 AGCD01042346;GBDF01286154;XR_262513 MODEL 39131903 rrna 5S_rRNA 5S ribosomal RNA 8708315 protein-coding LOC102006058 olfactory receptor 5D16-like NW_004955511 662118 663074 + 102006058 AGCD01066337;XM_005408204 XP_005408261 MODEL 8808575 protein-coding Acsl3 acyl-CoA synthetase long chain family member 3 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); fatty acid-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); ferroptosis (ortholog); long-chain fatty acid import into cell (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); lipid droplet (ortholog) NW_004955453 10916423 10963986 - 102022564 AGCD01044793;AGCD01044794;AGCD01044795;GBCE01118896;XM_005395491 XP_005395548 MODEL 8757763 protein-coding Plxnb1 plexin B1 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN inhibitory synapse assembly (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of osteoblast proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955532 471652 499525 - 102024379 AGCD01070126;AGCD01070127;GBDI01012767;XM_005410146;XM_005410147;XM_013507607 XP_005410203;XP_005410204;XP_013363061 MODEL 9061448 ncrna LOC102009859 uncharacterized LOC102009859 NW_004955427 7919836 7924927 + 102009859 AGCD01027059;GBDF01303674;XR_001234333;XR_001234334 MODEL 8707059 protein-coding B3galt6 beta-1,3-galactosyltransferase 6 ENCODES a protein that exhibits galactosylxylosylprotein 3-beta-galactosyltransferase activity (ortholog); UDP-galactosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH Al-Gazali Syndrome (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 1 (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 2 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) NW_004955486 9553765 9555675 - 102029184 AGCD01059190;AGCD01059191;GBDF01304798;XM_013504220 XP_013359674 MODEL 8753807 protein-coding Wee1 WEE1 G2 checkpoint kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN establishment of cell polarity (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955414 25281725 25299242 + 102030298 AGCD01015590;AGCD01015591;GBDF01053736;GBDI01132275;XM_005380269 XP_005380326 MODEL 39134255 misc_rna 7SK 7SK RNA 8773506 protein-coding Slc41a1 solute carrier family 41 member 1 ENCODES a protein that exhibits magnesium ion transmembrane transporter activity (ortholog); magnesium:sodium antiporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN cellular response to magnesium ion (ortholog); intracellular magnesium ion homeostasis (ortholog); magnesium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955406 41481831 41502992 - 102013380 AGCD01006685;GBCQ01039252;XM_005375375;XM_005375376 XP_005375432;XP_005375433 MODEL 9054832 ncrna LOC102004278 uncharacterized LOC102004278 NW_004955480 4530020 4536073 + 102004278 AGCD01056642;GBDF01146524;XR_263743 MODEL 8992158 protein-coding Arhgap17 Rho GTPase activating protein 17 INVOLVED IN actin filament organization (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955493 3326893 3384621 - 102028549 AGCD01060988;AGCD01060989;AGCD01060990;AGCD01060991;GBBH01117744;GBDJ01132148;XM_013504866;XM_013504867;XM_013504868;XM_013504869;XM_013504870 XP_013360320;XP_013360321;XP_013360322;XP_013360323;XP_013360324 MODEL 9036277 pseudo LOC102018464 40S ribosomal protein S10 pseudogene NW_004955406 4674448 4678458 - 102018464 AGCD01005699 MODEL 9017015 pseudo LOC102004640 coiled-coil domain-containing protein 94 pseudogene NW_004955532 391528 392376 + 102004640 AGCD01070116 MODEL 8821855 protein-coding LOC102010279 guanylate-binding protein 6-like NW_004955423 4800576 4831760 + 102010279 AGCD01023545;AGCD01023546;GBDI01220537;XM_005385092;XM_005385093 XP_005385149;XP_005385150 MODEL 8795536 protein-coding LOC102011029 chromosome unknown open reading frame, human C10orf67 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955429 5674076 5798289 + 102011029 AGCD01028531;AGCD01028532;AGCD01028533;AGCD01028534;AGCD01028535;AGCD01028536;GBDF01127753;XM_013515364 XP_013370818 MODEL 9035698 protein-coding Fkbp8 FKBP prolyl isomerase 8 ENCODES a protein that exhibits calmodulin binding (ortholog); disordered domain specific binding (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell fate specification (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clubfoot (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial envelope (ortholog); mitochondrial membrane (ortholog) NW_004955524 3037825 3044296 + 102023733 AGCD01068853;GBDF01003178;XM_013507284;XM_013507285 XP_013362738;XP_013362739 MODEL 8748193 pseudo LOC102007552 60S ribosomal protein L17 pseudogene NW_004955419 5413575 5414083 - 102007552 AGCD01019806 MODEL 39133976 misc_rna 7SK 7SK RNA 8702352 pseudo LOC102011889 KATNB1-like protein 1 NW_004955426 24920133 24920909 - 102011889 AGCD01026698 MODEL 9016674 protein-coding Celf2 CUGBP Elav-like family member 2 ENCODES a protein that exhibits lncRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN mRNA splice site recognition (ortholog); post-transcriptional gene silencing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 27064497 27374850 + 102014790 AGCD01022278;AGCD01022279;AGCD01022280;AGCD01022281;AGCD01022282;GBDJ01064049;XM_005383884;XM_005383886;XM_005383887;XM_013513693;XM_013513694;XM_013513696;XM_013513697;XM_013513698 XP_005383941;XP_005383943;XP_005383944;XP_013369147;XP_013369148;XP_013369150;XP_013369151;XP_013369152 MODEL 39131364 protein-coding CCDC148 coiled-coil domain containing 148 9065897 protein-coding Sox18 SRY-box transcription factor 18 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); blood vessel endothelial cell migration (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); basal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955528 204729 206772 + 102009103 AGCD01069514;AGCD01069515;GBBH01064583;GBBH01064584;XM_013507511 XP_013362965 MODEL 9013067 protein-coding Cyth4 cytohesin 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 23745797 23774397 + 102030173 AGCD01014335;GBCE01075881;XM_005379197 XP_005379254 MODEL 8785852 protein-coding Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); forebrain development (ortholog); negative regulation of inclusion body assembly (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955415 33098503 33102125 - 102017564 AGCD01016751;GBCB01021066;XM_005381107 XP_005381164 MODEL 9048593 protein-coding Cfap92 cilia and flagella associated protein 92 (putative) ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955450 10532347 10593351 + 102013781 AGCD01042625;AGCD01042626;AGCD01042627;GBDJ01020449;XM_013518909;XM_013518910;XM_013518911;XM_013518912;XM_013518913;XM_013518914;XM_013518915 XP_013374363;XP_013374364;XP_013374365;XP_013374366;XP_013374367;XP_013374368;XP_013374369 MODEL 8832867 protein-coding Aig1 androgen induced 1 ENCODES a protein that exhibits FAHFA hydrolase activity (ortholog); INVOLVED IN long-chain fatty acid catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955436 17056630 17285022 - 102006161 AGCD01033941;AGCD01033942;AGCD01033943;AGCD01033944;AGCD01033945;GBDJ01186332;GBDK01191698;XM_013516660 XP_013372114 MODEL 8991663 ncrna LOC102014205 uncharacterized LOC102014205 NW_004955405 34201814 34209313 - 102014205 AGCD01005369;GBDF01287702;XR_259428 MODEL 8798051 protein-coding Abcd2 ATP binding cassette subfamily D member 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); fatty acid biosynthetic process (ortholog); myelin maintenance (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955505 717800 769702 + 102028992 AGCD01064961;GBDF01177037;XM_005407101 XP_005407158 MODEL 8800480 protein-coding Rtl9 retrotransposon Gag like 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog) NW_004955490 5409277 5420508 - 102008324 AGCD01060204;GBDF01110928;XM_005404656 XP_005404713 MODEL 9051501 protein-coding Ca10 carbonic anhydrase 10 (inactive) ENCODES a protein that exhibits neurexin family protein binding (ortholog); INVOLVED IN gene expression (ortholog); protein processing (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN synapse (ortholog) NW_004955451 9877768 10362363 + 102021197 AGCD01043313;AGCD01043314;AGCD01043315;AGCD01043316;AGCD01043317;AGCD01043318;AGCD01043319;AGCD01043320;XM_013519057 XP_013374511 MODEL 8964925 pseudo LOC102013824 glycine cleavage system H protein, mitochondrial-like NW_004955477 9968046 9968555 + 102013824 AGCD01055688 MODEL 8976725 ncrna LOC102004995 uncharacterized LOC102004995 NW_004955403 8923034 8930408 - 102004995 AGCD01001897;AGCD01001898;GBDF01159890;XR_259164 MODEL 8763464 protein-coding Ampd2 adenosine monophosphate deaminase 2 ENCODES a protein that exhibits AMP deaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN AMP metabolic process (ortholog); ATP metabolic process (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog) NW_004955435 13029377 13040972 + 102007268 AGCD01033177;GBBH01116793;XM_005388885;XM_013516433;XM_013516434;XM_013516435 XP_005388942;XP_013371887;XP_013371888;XP_013371889 MODEL 8868865 protein-coding Il7 interleukin 7 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN bone resorption (ortholog); cellular response to hypoxia (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955444 2365077 2400953 + 102013224 AGCD01038758;AGCD01038759;AGCD01038760;AGCD01038761;GBCE01057367;GBDK01360525;XM_013518182 XP_013373636 MODEL 8791405 protein-coding Ap1s3 adaptor related protein complex 1 subunit sigma 3 INVOLVED IN protein targeting (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); psoriasis (ortholog); psoriasis 15 (ortholog) NW_004955453 10183640 10242195 + 102021206 AGCD01044782;AGCD01044783;GBCE01115394;XM_005395487;XM_013519980 XP_005395544;XP_013375434 MODEL 8937339 trna Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978834 AGCD01005375;AGCD01048768;AGCD01051216;AGCD01051466;AGCD01051471;AGCD01057629 MODEL 39131904 rrna 5S_rRNA 5S ribosomal RNA 8758197 ncrna LOC102012264 uncharacterized LOC102012264 NW_004955403 2898337 2898936 + 102012264 AGCD01001740;GBDJ01216344;XR_259140 MODEL 8716118 protein-coding LOC102008692 olfactory receptor 5P3-like NW_004955453 4970345 4985354 - 102008692 AGCD01044701;XM_013519758 XP_013375212 MODEL 8780668 ncrna LOC102006062 uncharacterized LOC102006062 NW_004955432 9620240 9642499 + 102006062 AGCD01030909;XR_261520 MODEL 9057426 protein-coding Cln6 CLN6 transmembrane ER protein ENCODES a protein that exhibits lysophosphatidic acid binding (ortholog); protein homodimerization activity (ortholog); sulfatide binding (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); ganglioside metabolic process (ortholog); glycosaminoglycan metabolic process (ortholog); ASSOCIATED WITH agenesis of the corpus callosum with peripheral neuropathy (ortholog); Animal Disease Models (ortholog); Atrophy (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955450 7876572 7885305 + 102022144 AGCD01042552;GBCB01026389;GBCQ01040807;XM_013518898;XM_013518899;XM_013518900 XP_013374352;XP_013374353;XP_013374354 MODEL 8928626 ncrna LOC102009084 uncharacterized LOC102009084 NW_004955427 14231272 14244398 + 102009084 AGCD01027268;GBBH01218259;XR_261275 MODEL 8975061 protein-coding Plxnb2 plexin B2 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN brain development (ortholog); excitatory synapse assembly (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 33297617 33314371 - 102025673 AGCD01014662;GBDI01012765;GBDJ01023023;XM_005379555 XP_005379612 MODEL 8796778 protein-coding Adgrf3 adhesion G protein-coupled receptor F3 ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955469 8280131 8291512 - 102010987 AGCD01052460;AGCD01052461;XM_013522571 XP_013378025 MODEL 8853652 protein-coding Wee2 WEE2 oocyte meiosis inhibiting kinase INVOLVED IN female meiotic nuclear division (ortholog); female pronucleus assembly (ortholog); negative regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); ASSOCIATED WITH Oocyte Maturation Defect 5 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955494 1836909 1869384 - 102015022 AGCD01061424;GBDJ01283231;XM_013505022 XP_013360476 MODEL 8708051 ncrna LOC102022541 uncharacterized LOC102022541 NW_004955538 1159133 1176031 - 102022541 AGCD01071047;AGCD01071048;AGCD01071049;AGCD01071050;GBDF01044132;XR_001232085;XR_001232086;XR_264795 MODEL 8993315 protein-coding LOC102007174 cocaine esterase-like NW_004955767 9802 20242 - 102007174 AGCD01078309;AGCD01078310;GBDJ01038301;XM_005415102 XP_005415159 MODEL 8730030 protein-coding Sh2d6 SH2 domain containing 6 ASSOCIATED WITH stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955424 2040012 2047142 - 102003463 AGCD01024261;GBDI01143647;XM_013514583 XP_013370037 MODEL 8992702 protein-coding Erlin1 ER lipid raft associated 1 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); protein-containing complex (ortholog) NW_004955507 6029247 6062946 - 102020593 AGCD01065695;GBDF01082079;XM_005407685;XM_005407686 XP_005407742;XP_005407743 MODEL 8735442 protein-coding Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 ENCODES a protein that exhibits misfolded protein binding (ortholog); protein folding chaperone (ortholog); signaling receptor binding (ortholog); INVOLVED IN mRNA modification (ortholog); negative regulation of neurogenesis (ortholog); protein maturation (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant polycystic kidney disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) NW_004955420 21097292 21113053 - 102028760 AGCD01021123;AGCD01021124;AGCD01021125;GBCC01049191;GBDI01118251;XM_013513338 XP_013368792 MODEL 9058529 ncrna LOC102008325 uncharacterized LOC102008325 NW_004955491 2918171 2920095 + 102008325 AGCD01060390;GBDF01117852;XR_264034 MODEL 8871452 protein-coding Reg4 regenerating family member 4 ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); mannan binding (ortholog); INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 22886351 22895884 - 102018638 AGCD01033523;XM_005389090 XP_005389147 MODEL 39134256 misc_rna 7SK 7SK RNA 8921758 protein-coding Prokr2 prokineticin receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN circadian rhythm (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955415 15867017 15878471 - 102011652 AGCD01016363;GBCE01138495;XM_005380830;XM_005380831;XM_013512101 XP_005380887;XP_005380888;XP_013367555 MODEL 8707690 ncrna LOC102004996 uncharacterized LOC102004996 NW_004955451 5008763 5013506 + 102004996 AGCD01043159;GBDF01208277;XR_001235984;XR_262579 MODEL 8992532 protein-coding Lrig3 leucine rich repeats and immunoglobulin like domains 3 INVOLVED IN otolith morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955458 6562167 6601517 - 102014328 AGCD01047563;AGCD01047564;GBCE01053955;GBDK01395878;XM_005397422 XP_005397479 MODEL 9016047 protein-coding LOC102009861 zinc finger protein 420-like NW_004955429 13414895 13444098 + 102009861 AGCD01028748;AGCD01028749;GBDF01252222;XM_013515503;XM_013515504;XM_013515505;XM_013515506 XP_013370957;XP_013370958;XP_013370959;XP_013370960 MODEL 9027773 protein-coding Slc41a2 solute carrier family 41 member 2 ENCODES a protein that exhibits transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); iron ion transport (ortholog); magnesium ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 39181396 39280789 - 102014318 AGCD01005496;AGCD01005497;AGCD01005498;GBDF01082692;XM_005374599;XM_005374600;XM_005374601;XM_005374602;XM_005374603;XM_013518965 XP_005374656;XP_005374657;XP_005374658;XP_005374659;XP_005374660;XP_013374419 MODEL 8754161 ncrna LOC102013482 uncharacterized LOC102013482 NW_004955410 30652472 30654572 + 102013482 AGCD01011311;GBDF01251645;XR_001232753 MODEL 39134110 misc_rna 7SK 7SK RNA 8726959 protein-coding Sox2 SRY-box transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); anatomical structure formation involved in morphogenesis (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Anophthalmia (ortholog); Ataxia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 10671888 10674080 + 102023039 AGCD01020783;GBBH01034135;XM_005383075 XP_005383132 MODEL 8922882 protein-coding Arhgap18 Rho GTPase activating protein 18 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of actin cytoskeleton organization (ortholog); regulation of actin filament polymerization (ortholog); regulation of cell motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); cytosol (ortholog) NW_004955436 10470398 10642890 - 102014824 AGCD01033785;AGCD01033786;AGCD01033787;AGCD01033788;AGCD01033789;GBBH01088499;XM_005389187;XM_005389189;XM_005389190;XM_013516675 XP_005389244;XP_005389246;XP_005389247;XP_013372129 MODEL 8830561 protein-coding Brd4 bromodomain containing 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); chromatin remodeling (ortholog); chromosome segregation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); autosomal dominant intellectual developmental disorder 23 (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955495 7959033 7989216 + 102009518 AGCD01062173;GBDF01154291;XM_013505125 XP_013360579 MODEL 9022800 protein-coding LOC102011031 odorant-binding protein 2b-like NW_004955513 2641785 2645058 + 102011031 AGCD01066883;GBBH01003721;XM_005408423;XM_013506570 XP_005408480;XP_013362024 MODEL 8936288 ncrna LOC102014209 uncharacterized LOC102014209 NW_004955406 20144960 20150756 - 102014209 AGCD01006099;AGCD01006100;GBDI01275825;XR_001236593 MODEL 8880568 protein-coding Aimp1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 ENCODES a protein that exhibits cytokine activity (ortholog); GTPase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cell-cell signaling (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cell surface (ortholog); cytosol (ortholog) NW_004955496 3073480 3108012 - 102008238 AGCD01062280;AGCD01062281;GBBH01115746;XM_005406219;XM_005406220 XP_005406276;XP_005406277 MODEL 8704965 protein-coding Cfap95 cilia and flagella associated protein 95 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) NW_004955434 3193250 3267992 - 102030467 AGCD01032129;AGCD01032130;GBDI01245825;XM_005388557;XR_001234830;XR_001234831 XP_005388614 MODEL 8727298 protein-coding Cdc42 cell division cycle 42 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); GBD domain binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament branching (ortholog); actin filament organization (ortholog); PARTICIPATES IN adenosine signaling pathway; c-Jun N-terminal kinases MAPK signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH Adrenal Gland Neoplasms (ortholog); Alzheimer's disease (ortholog); anemia (ortholog); FOUND IN apical part of cell (ortholog); cell leading edge (ortholog); cell periphery (ortholog) NW_004955452 2255940 2299042 + 102005099 AGCD01043886;AGCD01043887;AGCD01043888;AGCD01043889;AGCD01043890;GBBH01031197;XM_005394731;XM_005394732;XM_005394733;XM_013519580 XP_005394788;XP_005394789;XP_005394790;XP_013375034 MODEL 8870289 ncrna LOC102007553 uncharacterized LOC102007553 NW_004955483 2038491 2047890 - 102007553 AGCD01057666;GBCQ01014966;XR_263863 MODEL 8893762 protein-coding Acsl4 acyl-CoA synthetase long chain family member 4 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN dendritic spine development (ortholog); embryonic process involved in female pregnancy (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955490 6143833 6228395 + 102010170 AGCD01060217;AGCD01060218;GBCQ01006031;XM_005404662;XM_005404663;XM_013504536 XP_005404719;XP_005404720;XP_013359990 MODEL 8842008 protein-coding Atp11c ATPase phospholipid transporting 11C ENCODES a protein that exhibits ATPase-coupled intramembrane lipid carrier activity (ortholog); phosphatidylethanolamine flippase activity (ortholog); phosphatidylserine flippase activity (ortholog); INVOLVED IN phospholipid translocation (ortholog); positive regulation of B cell differentiation (ortholog); pre-B cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955489 5394553 5567295 + 102003247 AGCD01059939;AGCD01059940;GBDF01079626;XM_005404550;XM_005404551;XM_013504484;XM_013504485 XP_005404607;XP_005404608;XP_013359938;XP_013359939 MODEL 8882860 protein-coding Abcd3 ATP binding cassette subfamily D member 3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN mitochondrion (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) NW_004955423 280497 359711 - 102008743 AGCD01023411;GBCB01039248;XM_005384998 XP_005385055 MODEL 9023332 protein-coding B3gat1 beta-1,3-glucuronyltransferase 1 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Prostate Cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955412 35294434 35321873 - 102005242 AGCD01013408;AGCD01013409;GBDJ01307644;XM_005378603;XM_005378604;XM_005378605;XM_005378606;XM_005378607 XP_005378660;XP_005378661;XP_005378662;XP_005378663;XP_005378664 MODEL 8724020 ncrna LOC102012268 uncharacterized LOC102012268 NW_004955403 25880625 25907260 + 102012268 AGCD01002295;GBDF01251079;XR_001233582;XR_001233583;XR_259202 MODEL 9033538 protein-coding Ap2a1 adaptor related protein complex 2 subunit alpha 1 ENCODES a protein that exhibits clathrin-cargo adaptor activity (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of hyaluronan biosynthetic process (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955559 1117380 1143403 - 102030354 AGCD01073630;GBDF01003430;XM_005412825;XM_005412826;XM_013509046;XM_013509047 XP_005412882;XP_005412883;XP_013364500;XP_013364501 MODEL 15036850 trna Trnay-aua transfer RNA tyrosine (anticodon AUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978818 8936920 pseudo LOC102008707 retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta pseudogene NW_004955411 1587497 1587967 + 102008707 AGCD01011485;XM_005377918 MODEL 8949266 ncrna LOC102004280 uncharacterized LOC102004280 NW_004955482 1521498 1525666 - 102004280 AGCD01057219;GBBH01079736;XR_263818 MODEL 8755619 protein-coding Cln8 CLN8 transmembrane ER and ERGIC protein ENCODES a protein that exhibits ceramide binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); asthma (ortholog); Dwarfism (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955403 57926711 57938698 - 102014524 AGCD01003169;GBBH01208454;GBCB01050515;XM_013515028 XP_013370482 MODEL 8704012 protein-coding Celf3 CUGBP Elav-like family member 3 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); lncRNA transcription (ortholog); nuclear body organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955589 700965 715684 + 102016965 AGCD01076181;GBBH01095116;XM_005414558;XM_005414559;XM_005414561;XM_005414562;XM_005414563;XM_005414565 XP_005414615;XP_005414616;XP_005414618;XP_005414619;XP_005414620;XP_005414622 MODEL 8728454 protein-coding Cytip cytohesin 1 interacting protein INVOLVED IN regulation of cell adhesion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955449 15948739 15978641 + 102016766 AGCD01042204;GBDK01239047;XM_005393410;XM_013518801 XP_005393467;XP_013374255 MODEL 8766281 pseudo LOC102009085 beclin 1-associated autophagy-related key regulator pseudogene NW_004955427 20646973 20652239 + 102009085 AGCD01027412 MODEL 39131761 rrna 5S_rRNA 5S ribosomal RNA 9036915 pseudo LOC102010280 tubulin-folding cofactor B pseudogene NW_004955495 5024249 5025001 + 102010280 AGCD01061970 MODEL 8922411 pseudo LOC102003219 calcyclin-binding protein pseudogene NW_004955411 30807769 30808487 + 102003219 AGCD01012264 MODEL 8929193 protein-coding Lrit1 leucine rich repeat, Ig-like and transmembrane domains 1 INVOLVED IN chemical synaptic transmission (ortholog); phototransduction (ortholog); response to light stimulus (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); synapse (ortholog); synaptic cleft (ortholog) NW_004955510 3739957 3802081 - 102005493 AGCD01066247;GBDJ01166878;XM_005407886;XM_005407887;XR_001231669 XP_005407943;XP_005407944 MODEL 8873541 protein-coding LOC102004641 cytochrome b-245 light chain ENCODES a protein that exhibits electron transfer activity (ortholog); protein heterodimerization activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to gamma radiation (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955541 2570843 2573822 - 102004641 AGCD01071416;GBCQ01010127;GBDI01016531;XM_013507989 XP_013363443 MODEL 8799799 protein-coding LOC102007175 translationally-controlled tumor protein-like NW_004957362 28 1515 - 102007175 AGCD01080758;XM_005415228 XP_005415285 MODEL 8707854 protein-coding Fkbp9 FKBP prolyl isomerase 9 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955617 196845 234431 + 102010012 AGCD01077274;AGCD01077275;GBDF01081147;XM_005414998;XM_013510142 XP_005415055;XP_013365596 MODEL 8740923 protein-coding Rtn1 reticulon 1 INVOLVED IN negative regulation of amyloid-beta formation (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955466 13290419 13454387 - 102009815 AGCD01051156;AGCD01051157;AGCD01051158;AGCD01051159;AGCD01051160;GBBH01063056;XM_013522002 XP_013377456 MODEL 8899007 protein-coding Ca11 carbonic anhydrase 11 (inactive) ENCODES a protein that exhibits neurexin family protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955559 1910421 1914988 + 102006719 AGCD01073681;GBDI01170586;XM_005412940 XP_005412997 MODEL 8730679 protein-coding Ampd3 adenosine monophosphate deaminase 3 ENCODES a protein that exhibits AMP deaminase activity (ortholog); INVOLVED IN ADP catabolic process (ortholog); ADP metabolic process (ortholog); AMP catabolic process (ortholog); ASSOCIATED WITH Adenosine Monophosphate Deaminase Deficiency (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955414 26073192 26116448 + 102006122 AGCD01015637;AGCD01015638;GBDI01356542;XM_005380277;XM_005380278 XP_005380334;XP_005380335 MODEL 8995744 ncrna LOC102011891 uncharacterized LOC102011891 NW_004955429 17730248 17732306 - 102011891 AGCD01028865;GBDF01041050;XR_261353 MODEL 8752924 protein-coding Il7r interleukin 7 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-7 receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); cell morphogenesis (ortholog); cellular homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955426 20785896 20818512 + 102009522 AGCD01026575;GBDF01110704;XM_005386201;XM_005386202;XM_013515007;XM_013515008 XP_005386258;XP_005386259;XP_013370461;XP_013370462 MODEL 39131905 rrna 5S_rRNA 5S ribosomal RNA 8823685 protein-coding Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); ERAD pathway (ortholog); protein folding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) NW_004955437 19266206 19285654 + 102028576 AGCD01034841;GBDF01157510;XM_005390011;XM_005390012;XM_005390014 XP_005390068;XP_005390069;XP_005390071 MODEL 9033393 protein-coding Ccdc149 coiled-coil domain containing 149 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955480 156614 252370 + 102022919 AGCD01056579;AGCD01056580;GBDI01258774;XM_013503308 XP_013358762 MODEL 8878159 ncrna LOC102018470 uncharacterized LOC102018470 NW_004955456 7484949 7492235 + 102018470 AGCD01046416;AGCD01046417;GBDF01004071;XR_262887 MODEL 8760477 protein-coding Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit ENCODES a protein that exhibits P-type potassium:proton transporter activity (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN potassium ion homeostasis (ortholog); regulation of pH (ortholog); response to metal ion (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hypokalemia (ortholog); lung cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955497 225401 251024 + 102008640 AGCD01062403;AGCD01062404;GBDJ01132176;GBDJ01132177;XM_013505518 XP_013360972 MODEL 8959528 protein-coding LOC102022542 uncharacterized protein DDB_G0290301-like NW_004955539 3415874 3417143 + 102022542 AGCD01071252;GBDF01156883;XM_005410907 XP_005410964 MODEL 8895668 protein-coding Adgrf4 adhesion G protein-coupled receptor F4 INVOLVED IN erythrocyte development (ortholog); gene expression (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); schizophrenia (ortholog) NW_004955437 12127365 12147227 + 102013005 AGCD01034598;GBCC01026570;XM_005389878;XM_013516712 XP_005389935;XP_013372166 MODEL 9047660 protein-coding Wfdc1 WAP four-disulfide core domain 1 INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of wound healing (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955564 22536 38091 - 102017517 AGCD01074187;GBDK01412209;XM_005413214;XM_005413215;XM_013509194;XM_013509195 XP_005413271;XP_005413272;XP_013364648;XP_013364649 MODEL 8864632 protein-coding LOC102004282 histone H2B.v1-like NW_004955483 833570 838166 + 102004282 AGCD01057632;AGCD01057633;GBDI01063041;XM_005403424 XP_005403481 MODEL 9015212 protein-coding Plxnb3 plexin B3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); protein domain specific binding (ortholog); Rho GDP-dissociation inhibitor binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); homophilic cell-cell adhesion (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog) NW_004955580 482602 495628 + 102016653 AGCD01075607;GBBH01163823;XM_005414143;XM_013509679;XM_013509680;XM_013509681;XM_013509682;XM_013509683;XM_013509684;XM_013509685;XM_013509686;XM_013509687;XR_001232477 XP_005414200;XP_013365133;XP_013365134;XP_013365135;XP_013365136;XP_013365137;XP_013365138;XP_013365139;XP_013365140;XP_013365141 MODEL 8979767 protein-coding Sh2d7 SH2 domain containing 7 ASSOCIATED WITH thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955450 650339 660567 + 102007289 AGCD01042340;AGCD01042341;GBBH01112313;XM_013518895 XP_013374349 MODEL 8757477 pseudo LOC102013825 60S ribosomal protein L7a pseudogene NW_004955416 19108776 19109577 + 102013825 AGCD01017415 MODEL 8970783 protein-coding LOC102009862 olfactory receptor 1440 NW_004955511 3826101 3827067 - 102009862 AGCD01066477;XM_005408060 XP_005408117 MODEL 39133977 misc_rna 7SK 7SK RNA 8892192 pseudo LOC102011032 aurora kinase A pseudogene NW_004955431 1227505 1229111 - 102011032 AGCD01029892 MODEL 8877860 protein-coding Brd7 bromodomain containing 7 ENCODES a protein that exhibits histone binding (ortholog); histone H3K14ac reader activity (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 8425976 8462431 - 102008761 AGCD01031593;AGCD01031594;GBBH01166493;GBCB01024456;XM_013516217 XP_013371671 MODEL 9030472 protein-coding Erlin2 ER lipid raft associated 2 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane raft (ortholog) NW_004955463 13445468 13460370 + 102011633 AGCD01049867;GBBH01031754;XM_005398411;XM_013521497;XM_013521498 XP_005398468;XP_013376951;XP_013376952 MODEL 8891497 protein-coding Rtn2 reticulon 2 INVOLVED IN gene expression (ortholog); intracellular protein transmembrane transport (ortholog); negative regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive distal hereditary motor neuronopathy 11 (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955574 1543 11476 - 102013024 AGCD01075076;GBCB01006561;GBDJ01354782;XM_005413783 XP_005413840 MODEL 8781922 ncrna LOC102005000 uncharacterized LOC102005000 NW_004956010 5739 9937 - 102005000 AGCD01078868;GBDF01006044;XR_265201 MODEL 41410890 protein-coding REG4 39134257 misc_rna 7SK 7SK RNA 8888306 protein-coding Abcd4 ATP binding cassette subfamily D member 4 ENCODES a protein that exhibits ABC-type vitamin B12 transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cobalamin metabolic process (ortholog); cobalamin transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); brain disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog); peroxisome (ortholog) NW_004955523 1170306 1181352 + 102019945 AGCD01068504;GBBH01088354;GBCE01076781;XM_013507174;XM_013507176;XM_013507177;XR_001231940 XP_013362628;XP_013362630;XP_013362631 MODEL 8821940 ncrna LOC102013484 uncharacterized LOC102013484 NW_004955411 20773140 20790799 + 102013484 AGCD01012062;GBDF01156022;XR_001232796;XR_001232797;XR_259940 MODEL 8716338 protein-coding Slc41a3 solute carrier family 41 member 3 ENCODES a protein that exhibits magnesium:sodium antiporter activity (ortholog); INVOLVED IN mitochondrial magnesium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); plasma membrane (ortholog) NW_004955421 21349484 21407171 - 102017779 AGCD01022107;AGCD01022108;GBCQ01151305;XM_005383826;XM_005383827;XM_005383828;XM_005383829;XM_013513732 XP_005383883;XP_005383884;XP_005383885;XP_005383886;XP_013369186 MODEL 8961865 protein-coding Clnk cytokine dependent hematopoietic cell linker ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); intracellular signal transduction (ortholog); mast cell degranulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mast cell granule (ortholog); protein-containing complex (ortholog) NW_004955549 2166891 2375902 + 102009993 AGCD01072465;AGCD01072466;AGCD01072467;AGCD01072468;GBBH01036416;XM_013508541;XM_013508542;XM_013508543 XP_013363995;XP_013363996;XP_013363997 MODEL 8740717 protein-coding Cytl1 cytokine like 1 INVOLVED IN cartilage homeostasis (ortholog); chondrocyte differentiation (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH melanoma (ortholog) NW_004955514 4826792 4831424 + 102024943 AGCD01067141;GBCB01053473;XM_005408829 XP_005408886 MODEL 8726040 ncrna LOC102008328 uncharacterized LOC102008328 NW_004955423 11498337 11509824 - 102008328 AGCD01023701;GBDF01306799;XR_260965;XR_260966 MODEL 8931408 ncrna LOC102003223 uncharacterized LOC102003223 NW_004955467 6583158 6595059 - 102003223 AGCD01051417;GBDI01181558;XR_001236858;XR_263342;XR_263343;XR_263344 MODEL 8817903 ncrna LOC102006066 uncharacterized LOC102006066 NW_004955518 1072445 1103749 + 102006066 AGCD01067755;AGCD01067756;GBDF01079167;XR_264564 MODEL 8920004 protein-coding Aimp2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of neuron apoptotic process (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 17 (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955460 13754487 13762726 - 102023783 AGCD01048722;GBDJ01191946;XM_005397896;XM_005397897 XP_005397953;XP_005397954 MODEL 8704192 protein-coding Ca12 carbonic anhydrase 12 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN chloride ion homeostasis (ortholog); estrous cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955450 11927730 11975553 + 102026927 AGCD01042685;GBBH01177179;XM_013518981 XP_013374435 MODEL 8769456 protein-coding Acsl5 acyl-CoA synthetase long chain family member 5 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Diarrhea 13 (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955431 17477113 17524539 + 102028782 AGCD01030408;GBDF01124690;XM_005387762;XM_005387763;XM_005387764 XP_005387819;XP_005387820;XP_005387821 MODEL 8846876 protein-coding B3gat2 beta-1,3-glucuronyltransferase 2 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN carbohydrate biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Barrett's esophagus (ortholog); schizophrenia (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955488 5866148 5926567 - 102029299 AGCD01059637;AGCD01059638;AGCD01059639;AGCD01059640;AGCD01059641;AGCD01059642;GBDJ01044362;XM_005404478 XP_005404535 MODEL 9005600 ncrna LOC102012270 uncharacterized LOC102012270 NW_004955451 13227860 13233237 + 102012270 AGCD01043462;GBDK01199688;XR_262601 MODEL 39131906 rrna 5S_rRNA 5S ribosomal RNA 8868705 ncrna LOC102008709 uncharacterized LOC102008709 NW_004955412 20482901 20493630 + 102008709 AGCD01013009;GBDF01240677;XR_001232902;XR_001232903;XR_260004 MODEL 39134111 misc_rna 7SK 7SK RNA 9006438 protein-coding Celf4 CUGBP Elav-like family member 4 ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); in utero embryonic development (ortholog); mRNA splice site recognition (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955402 23607160 23898495 - 102017078 AGCD01000629;AGCD01000630;AGCD01000631;AGCD01000632;AGCD01000633;GBDJ01265678;XM_005372840;XM_005372842;XM_013510322;XM_013510323 XP_005372897;XP_005372899;XP_013365776;XP_013365777 MODEL 8959395 protein-coding Ccdc15 coiled-coil domain containing 15 INVOLVED IN cilium assembly (ortholog); positive regulation of centriole elongation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955412 26014842 26089556 + 102017319 AGCD01013183;GBDF01160257;XM_005378449;XM_005378450;XM_005378451;XM_005378452;XM_005378453;XM_013511257 XP_005378506;XP_005378507;XP_005378508;XP_005378509;XP_005378510;XP_013366711 MODEL 8872349 protein-coding Sox21 SRY-box transcription factor 21 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN hair cycle (ortholog); hair follicle development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) NW_004955404 15181866 15184317 + 102020079 AGCD01003535;AGCD01003536;GBBH01186966;XM_005374233 XP_005374290 MODEL 8851567 protein-coding Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 INVOLVED IN axonemal central apparatus assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cough (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axoneme (ortholog); cytoplasm (ortholog); motile cilium (ortholog) NW_004955414 17599549 17613724 - 102010892 AGCD01015245;GBDF01001565;XM_005379931 XP_005379988 MODEL 8926172 ncrna LOC102010281 uncharacterized LOC102010281 NW_004955497 1128473 1136942 + 102010281 AGCD01062452;XR_001231423;XR_264189 MODEL 9006201 ncrna LOC102009086 uncharacterized LOC102009086 NW_004955428 14583845 14601030 - 102009086 AGCD01027989;AGCD01027990;GBCB01109528;XR_261303 MODEL 8802708 protein-coding LOC102004649 N-formyl peptide receptor 2-like NW_004955558 759900 765019 - 102004649 AGCD01073389;XM_013508846 XP_013364300 MODEL 8915263 protein-coding Arhgap19 Rho GTPase activating protein 19 ENCODES a protein that exhibits GTPase activator activity (ortholog); GTPase binding (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2KK (ortholog); FOUND IN cytoplasm (ortholog); equatorial cell cortex (ortholog); nucleus (ortholog) NW_004955507 3400273 3471943 - 102003165 AGCD01065621;AGCD01065622;AGCD01065623;AGCD01065624;AGCD01065625;AGCD01065626;GBCQ01061658;GBDF01153442;XM_013506225 XP_013361679 MODEL 8793106 protein-coding Adgrf5 adhesion G protein-coupled receptor F5 INVOLVED IN energy reserve metabolic process (ortholog); erythrocyte development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955437 11639555 11710362 - 102009876 AGCD01034580;GBBH01164762;XM_005389870;XM_005389871;XM_005389872;XM_005389873;XM_005389874 XP_005389927;XP_005389928;XP_005389929;XP_005389930;XP_005389931 MODEL 8852754 protein-coding Cdc42bpa CDC42 binding protein kinase alpha ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN actomyosin (ortholog); cell leading edge (ortholog); cell-cell junction (ortholog) NW_004955406 9906195 10178281 + 102013378 AGCD01005840;AGCD01005841;AGCD01005842;AGCD01005843;AGCD01005844;AGCD01005845;AGCD01005846;AGCD01005847;AGCD01005848;AGCD01005849;GBCQ01099552;GBDK01017928;XM_005374798 XP_005374855 MODEL 8875335 ncrna LOC102004284 uncharacterized LOC102004284 NW_004955420 3065393 3096845 + 102004284 AGCD01020612;GBDF01113022;XR_260679;XR_260680 MODEL 8804605 protein-coding Cfap96 cilia and flagella associated protein 96 ASSOCIATED WITH colorectal cancer (ortholog); developmental and epileptic encephalopathy 1 (ortholog); esophageal cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic microtubule (ortholog) NW_004955403 23617764 23634689 - 102025310 AGCD01002248;GBBH01172709;XM_005373458;XM_005373459;XM_005373461;XM_013512932;XM_013512939;XM_013512946 XP_005373515;XP_005373516;XP_005373518;XP_013368386;XP_013368393;XP_013368400 MODEL 8972222 pseudo LOC102007555 eukaryotic translation initiation factor 2A-like NW_004955484 7623437 7625083 + 102007555 AGCD01058340 MODEL 9019001 protein-coding Lrit2 leucine rich repeat, Ig-like and transmembrane domains 2 NW_004955510 3732436 3736557 - 102021154 AGCD01066247;XM_005407931 XP_005407988 MODEL 9052014 pseudo LOC102011036 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L pseudogene NW_004955434 9417014 9421344 + 102011036 AGCD01032299;AGCD01032300 MODEL 8904696 protein-coding Amph amphiphysin ENCODES a protein that exhibits phosphatase binding (ortholog); phospholipid binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN learning (ortholog); positive regulation of endocytosis (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955460 4804400 5024312 + 102020771 AGCD01048441;AGCD01048442;AGCD01048443;AGCD01048444;AGCD01048445;AGCD01048446;GBDF01211444;XM_005397735;XM_013521259;XM_013521260 XP_005397792;XP_013376713;XP_013376714 MODEL 8944041 protein-coding Prom1 prominin 1 ENCODES a protein that exhibits actinin binding (ortholog); cadherin binding (ortholog); INVOLVED IN camera-type eye photoreceptor cell differentiation (ortholog); glomerular parietal epithelial cell differentiation (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colonic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); cell surface (ortholog) NW_004955480 7955501 8059537 + 102013828 AGCD01056713;AGCD01056714;AGCD01056715;GBBH01213994;XM_005402515;XM_005402516;XM_005402519;XM_013503331 XP_005402572;XP_005402573;XP_005402576;XP_013358785 MODEL 8882702 protein-coding Brd8 bromodomain containing 8 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955418 2232853 2275812 + 102005259 AGCD01018753;AGCD01018754;GBCE01097970;XM_005382124;XM_005382125;XM_005382126;XM_005382127;XM_005382128;XM_005382129;XM_005382130;XM_013512994;XM_013512995;XM_013512996;XM_013512997 XP_005382181;XP_005382182;XP_005382183;XP_005382184;XP_005382185;XP_005382186;XP_005382187;XP_013368448;XP_013368449;XP_013368450;XP_013368451 MODEL 8760578 protein-coding Aip AHR interacting HSP90 co-chaperone ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); enzyme binding (ortholog); GAF domain binding (ortholog); INVOLVED IN protein localization to mitochondrion (ortholog); protein maturation (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); adenoma (ortholog); asthma (ortholog); FOUND IN aryl hydrocarbon receptor complex (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955422 17997683 18003888 - 102014576 AGCD01022934;GBBH01090969;GBDF01044027;XM_005384314 XP_005384371 MODEL 39131762 rrna 5S_rRNA 5S ribosomal RNA 8741306 protein-coding Rtn3 reticulon 3 INVOLVED IN endoplasmic reticulum tubular network formation (ortholog); endoplasmic reticulum tubular network organization (ortholog); negative regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); glutamatergic synapse (ortholog) NW_004955422 21289652 21358865 - 102029871 AGCD01023114;AGCD01023115;AGCD01023116;GBDF01082603;XM_005384670;XM_013514093;XM_013514094;XM_013514095 XP_005384727;XP_013369547;XP_013369548;XP_013369549 MODEL 8707940 protein-coding LOC102013488 disintegrin and metalloproteinase domain-containing protein 29-like NW_004955466 20379 80896 + 102013488 AGCD01050641;AGCD01050642;AGCD01050643;AGCD01050644;AGCD01050645;AGCD01050646;AGCD01050647;AGCD01050648;AGCD01050649;XM_005399240 XP_005399297 MODEL 39131316 protein-coding WFDC1 WAP four-disulfide core domain 1 39133978 misc_rna 7SK 7SK RNA 8958449 protein-coding LOC102009864 olfactory receptor 4D11-like NW_004955511 3981204 3982139 + 102009864 AGCD01066484;XM_005408268 XP_005408325 MODEL 8771145 protein-coding Ccdc150 coiled-coil domain containing 150 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 3645202 3720343 - 102018452 AGCD01001771;GBDJ01383196;XM_013512113;XM_013512117;XM_013512120 XP_013367567;XP_013367571;XP_013367574 MODEL 10371996 protein-coding Fkbpl FKBP prolyl isomerase like INVOLVED IN regulation of angiogenesis (ortholog); regulation of blood vessel branching (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955437 592098 594244 - 106146274 AGCD01034150;GBDJ01373671;XM_013516901;XM_013516902 XP_013372355;XP_013372356 MODEL 8803746 protein-coding Cyyr1 cysteine and tyrosine rich 1 NW_004955407 26208335 26313566 - 102021309 AGCD01007525;AGCD01007526;AGCD01007527;GBDJ01299809;XM_005375600 XP_005375657 MODEL 8798867 protein-coding Dnajb14 DnaJ heat shock protein family (Hsp40) member B14 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); INVOLVED IN protein folding (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) NW_004955496 7746896 7782424 + 102021891 AGCD01062385;GBDF01156236;XM_013505382 XP_013360836 MODEL 8721672 protein-coding Ap2a2 adaptor related protein complex 2 subunit alpha 2 ENCODES a protein that exhibits clathrin-cargo adaptor activity (ortholog); disordered domain specific binding (ortholog); kinase binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN AP-2 adaptor complex (ortholog); cytoplasmic vesicle (ortholog); membrane coat (ortholog) NW_004955476 11184944 11229385 - 102005465 AGCD01055443;AGCD01055444;GBCQ01002043;XM_005401795 XP_005401852 MODEL 8865639 protein-coding LOC102011892 olfactory receptor 9G4 NW_004955511 1843967 1844917 - 102011892 AGCD01066381;XM_005407980 XP_005408037 MODEL 8800239 pseudo LOC102004286 prickle-like protein 1 pseudogene NW_004955420 23753712 23754662 - 102004286 AGCD01021255 MODEL 8905457 trna Trnay-gua transfer RNA tyrosine (anticodon GUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978819 AGCD01039088;AGCD01052488;AGCD01057606;AGCD01072575;AGCD01072578 MODEL 8962133 pseudo LOC102018472 olfactory receptor 9-like NW_004955458 3279883 3281726 + 102018472 AGCD01047291 MODEL 8852335 protein-coding LOC102005001 keratin, type I cytoskeletal 14 NW_004955451 15903561 15907545 - 102005001 AGCD01043639;GBCE01032375;XM_005394411 XP_005394468 MODEL 8759388 protein-coding Rel REL proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of interferon-beta production (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atrophic gastritis (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955424 22909035 22939651 - 102027422 AGCD01024993;AGCD01024994;GBBH01182330;XM_005385753;XM_013514714 XP_005385810;XP_013370168 MODEL 8715599 protein-coding B3gat3 beta-1,3-glucuronyltransferase 3 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); Golgi apparatus (ortholog) NW_004955599 573982 578032 + 102015263 AGCD01076660;GBDK01069802;XM_005414790 XP_005414847 MODEL 8920981 protein-coding Atp13a1 ATPase 13A1 ENCODES a protein that exhibits membrane protein dislocase activity (ortholog); INVOLVED IN extraction of mislocalized protein from ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955524 2365605 2378459 + 102016412 AGCD01068811;GBDF01047188;XM_005409647 XP_005409704 MODEL 9002759 protein-coding Abce1 ATP binding cassette subfamily E member 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); CTPase activity (ortholog); endoribonuclease inhibitor activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); translational termination (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955428 1029909 1058902 + 102029644 AGCD01027598;AGCD01027599;GBDF01121311;XM_005386633 XP_005386690 MODEL 9065638 protein-coding LOC102008710 olfactory receptor 8B4-like NW_004955412 25399638 25400570 - 102008710 AGCD01013151;XM_005378422 XP_005378479 MODEL 8890756 protein-coding Slc43a1 solute carrier family 43 member 1 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); L-isoleucine transmembrane transporter activity (ortholog); L-leucine transmembrane transporter activity (ortholog); INVOLVED IN isoleucine transport (ortholog); L-amino acid transport (ortholog); L-leucine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955511 2474173 2490508 - 102017592 AGCD01066408;GBDJ01234525;XM_005407995;XM_013506490;XM_013506491;XM_013506492;XM_013506493 XP_005408052;XP_013361944;XP_013361945;XP_013361946;XP_013361947 MODEL 8853375 pseudo LOC102007176 uncharacterized LOC102007176 NW_004955403 21438343 21464628 - 102007176 AGCD01002196 MODEL 39131295 protein-coding CLNK cytokine dependent hematopoietic cell linker 730469152 misc_rna SOX2OT_exon1 SOX2 overlapping transcript exon 1 8984718 ncrna LOC102013827 uncharacterized LOC102013827 NW_004955417 7843248 7844073 - 102013827 AGCD01018017;GBBH01057314;XR_260464 MODEL 8905879 protein-coding Il9 interleukin 9 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-9 receptor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Airway Obstruction (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 30950816 30953571 - 102012504 AGCD01008818;GBDF01218996;XM_005376487 XP_005376544 MODEL 8709960 protein-coding Erln endoregulin FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955506 6590028 6592474 - 102014927 AGCD01065432;GBDF01040884;XM_005407489 XP_005407546 MODEL 9062049 ncrna LOC102006068 uncharacterized LOC102006068 NW_004955522 4443395 4446145 - 102006068 AGCD01068417;GBDF01236174;XR_001231902 MODEL 8731343 protein-coding Wfdc2 WAP four-disulfide core domain 2 ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN club cell differentiation (ortholog); lung vasculature development (ortholog); positive regulation of lung alveolus development (ortholog); ASSOCIATED WITH Bronchiectasis and Nasal Polyposis (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955445 11723634 11730304 - 102004654 AGCD01039714;GBDF01122565;XM_005392423;XM_013518349 XP_005392480;XP_013373803 MODEL 8730107 pseudo LOC102007556 60S ribosomal protein L9 pseudogene NW_004955419 23050823 23052195 - 102007556 AGCD01020311 MODEL 8752149 protein-coding LOC102003224 olfactory receptor 151-like NW_004955412 25576967 25577911 + 102003224 AGCD01013160;XM_005378654 XP_005378711 MODEL 8908004 protein-coding Plxnc1 plexin C1 INVOLVED IN regulation of synapse pruning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog) NW_004955405 30885277 31023947 + 102027377 AGCD01005280;GBDF01119435;XM_005374690;XM_013518393;XM_013518395;XM_013518396;XM_013518398 XP_005374747;XP_013373847;XP_013373849;XP_013373850;XP_013373852 MODEL 39134258 misc_rna 7SK 7SK RNA 9068206 pseudo LOC102022544 caspase-3 pseudogene NW_004955543 215177 216358 - 102022544 AGCD01071566 MODEL 8734358 pseudo LOC102014211 28S ribosomal protein S36, mitochondrial pseudogene NW_004955407 3015541 3015967 + 102014211 AGCD01006848 MODEL 8856910 protein-coding LOC102012271 HAUS augmin-like complex subunit 8 NW_004956214 17 6395 + 102012271 AGCD01079252;GBDI01323698;GBDK01356093;XM_005415178;XM_005415179;XM_005415180;XM_005415181 XP_005415235;XP_005415236;XP_005415237;XP_005415238 MODEL 9047464 protein-coding Amt aminomethyltransferase ENCODES a protein that exhibits aminomethyltransferase activity (ortholog); INVOLVED IN glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Acidoses (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955532 1351743 1358220 - 102013210 AGCD01070179;AGCD01070180;GBCE01187398;XM_005410201 XP_005410258 MODEL 8942319 protein-coding Prom2 prominin 2 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN negative regulation of caveolin-mediated endocytosis (ortholog); negative regulation of pinocytosis (ortholog); positive regulation of cell projection organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); cytoplasmic vesicle (ortholog) NW_004955470 3524900 3538882 + 102012185 AGCD01052703;GBCQ01040977;XM_005400644 XP_005400701 MODEL 8784056 protein-coding Brd9 bromodomain containing 9 ENCODES a protein that exhibits histone reader activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog) NW_004955504 416145 434132 - 102028991 AGCD01064819;GBCE01000275;XM_005407029;XM_005407030;XM_013505887;XM_013505888;XM_013505889 XP_005407086;XP_005407087;XP_013361341;XP_013361342;XP_013361343 MODEL 8771278 protein-coding Sh3bgr SH3 domain binding glutamate rich protein NW_004955407 38225827 38265792 + 102026294 AGCD01007799;AGCD01007800;AGCD01007801;AGCD01007802;AGCD01007803;GBCQ01164597;XM_005375770;XM_005375771;XM_005375772 XP_005375827;XP_005375828;XP_005375829 MODEL 8870228 protein-coding Aipl1 AIP like 1 HSP90 co-chaperone ENCODES a protein that exhibits farnesylated protein binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); phototransduction, visible light (ortholog); regulation of opsin-mediated signaling pathway (ortholog); ASSOCIATED WITH blindness (ortholog); esophageal cancer (ortholog); Eye Abnormalities (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); photoreceptor inner segment (ortholog) NW_004955467 11952940 11962147 - 102005456 AGCD01051621;XM_005399662 XP_005399719 MODEL 8735699 pseudo LOC102008330 guanine nucleotide-binding protein G(k) subunit alpha pseudogene NW_004955497 3650046 3651027 - 102008330 AGCD01062552 MODEL 8975653 protein-coding Celf5 CUGBP Elav-like family member 5 INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955495 5182758 5214724 - 102022307 AGCD01061981;AGCD01061982;GBDF01280862;XM_005405838;XM_005405839;XM_005405840;XM_005405841;XM_005405842;XM_005405843;XM_005405844;XM_005405845;XM_013505241;XM_013505242;XM_013505243;XM_013505244;XM_013505245;XM_013505246 XP_005405895;XP_005405896;XP_005405897;XP_005405898;XP_005405899;XP_005405900;XP_005405901;XP_005405902;XP_013360695;XP_013360696;XP_013360697;XP_013360698;XP_013360699;XP_013360700 MODEL 8740002 pseudo LOC102010284 general transcription factor 3C polypeptide 6 pseudogene NW_004955500 4949060 4951908 + 102010284 AGCD01063817 MODEL 8911755 protein-coding Adgrg1 adhesion G protein-coupled receptor G1 ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); brain development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN extracellular region (ortholog); glial limiting end-foot (ortholog); membrane raft (ortholog) NW_004955433 15253196 15288982 + 102030658 AGCD01031751;GBCQ01011245;XM_005388402;XM_013516235;XM_013516236;XM_013516237;XM_013516238;XM_013516239 XP_005388459;XP_013371689;XP_013371690;XP_013371691;XP_013371692;XP_013371693 MODEL 8793393 protein-coding Sh3bgrl SH3 domain binding glutamate rich protein like ENCODES a protein that exhibits protein-RNA adaptor activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of cytoplasmic translational initiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955529 1159704 1223222 + 102019318 AGCD01069675;AGCD01069676;AGCD01069677;GBDJ01011359;XM_005410074 XP_005410131 MODEL 8911057 protein-coding Ca13 carbonic anhydrase 13 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog); myelin sheath (ortholog) NW_004955417 3194961 3219019 + 102003867 AGCD01017907;GBDJ01132278;XM_005381741 XP_005381798 MODEL 9032373 ncrna LOC102011037 uncharacterized LOC102011037 NW_004955435 7325862 7336787 - 102011037 AGCD01032952;AGCD01032953;AGCD01032954;GBDF01178841;XR_261667 MODEL 39131907 rrna 5S_rRNA 5S ribosomal RNA 8865248 protein-coding Acsl6 acyl-CoA synthetase long chain family member 6 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); enzyme binding (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955408 3336214 3391117 - 102024427 AGCD01008053;AGCD01008054;AGCD01008055;GBCB01026326;XM_005376085;XM_005376086;XM_005376087;XM_005376089;XM_005376090;XM_005376091;XM_005376093;XM_013508247 XP_005376142;XP_005376143;XP_005376144;XP_005376146;XP_005376147;XP_005376148;XP_005376150;XP_013363701 MODEL 39134112 misc_rna 7SK 7SK RNA 8935941 pseudo LOC102018475 60S ribosomal protein L21 pseudogene NW_004955408 8362648 8363163 + 102018475 AGCD01008216 MODEL 39131763 rrna 5S_rRNA 5S ribosomal RNA 9004722 protein-coding Rtn4 reticulon 4 ENCODES a protein that exhibits cadherin binding (ortholog); lipid binding (ortholog); metal ion binding (ortholog); INVOLVED IN axonal fasciculation (ortholog); blastocyst formation (ortholog); cardiac epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN anchoring junction (ortholog); axon (ortholog); cell junction (ortholog) NW_004955424 28061346 28125838 + 102013429 AGCD01025146;AGCD01025147;GBCQ01010590;XM_013514627 XP_013370081 MODEL 8814863 pseudo LOC102004651 protein ELYS-like NW_004955443 9345582 9368751 - 102004651 AGCD01038349;AGCD01038350;AGCD01038351;AGCD01038352 MODEL 8867938 protein-coding LOC102009091 late lactation protein B-like NW_004955513 2501589 2504529 + 102009091 AGCD01066880;GBBH01002386;XM_013506585 XP_013362039 MODEL 8935691 pseudo LOC102007177 60S ribosomal protein L7a-like NW_004955451 3799761 3801516 + 102007177 AGCD01043072;AGCD01043073;XR_262625 MODEL 8835506 protein-coding LOC102013491 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10981913 11033217 - 102013491 AGCD01051593;AGCD01051594;AGCD01051595;AGCD01051596;AGCD01051597;GBDK01014412;XM_013522161;XM_013522162;XM_013522163;XM_013522164 XP_013377615;XP_013377616;XP_013377617;XP_013377618 MODEL 8817976 protein-coding Arhgap20 Rho GTPase activating protein 20 ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); prostate cancer (ortholog) NW_004955412 12433350 12515922 - 102011293 AGCD01012820;GBDF01192411;XM_005378054 XP_005378111 MODEL 8934951 protein-coding Lrit3 leucine rich repeat, Ig-like and transmembrane domains 3 INVOLVED IN gene expression (ortholog); intracellular protein localization (ortholog); regulation of fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1F (ortholog); fundus dystrophy (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); perikaryon (ortholog) NW_004955496 434236 456239 - 102024356 AGCD01062227;AGCD01062228;XM_005406184 XP_005406241 MODEL 8880071 protein-coding Ccdc152 coiled-coil domain containing 152 ASSOCIATED WITH basal cell carcinoma (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955426 26899303 26950428 + 102028441 AGCD01026787;AGCD01026788;AGCD01026789;AGCD01026790;AGCD01026791;GBBH01026408;XM_005386252;XM_005386253 XP_005386309;XP_005386310 MODEL 8864479 protein-coding Celf6 CUGBP Elav-like family member 6 INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); synaptic transmission, serotonergic (ortholog); vocalization behavior (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uveal melanoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955450 4822125 4853572 + 102028251 AGCD01042481;AGCD01042482;AGCD01042483;GBDF01191936;XM_005393608;XM_005393609;XM_005393610;XM_013518822;XM_013518823 XP_005393665;XP_005393666;XP_005393667;XP_013374276;XP_013374277 MODEL 8949342 pseudo LOC102009866 U2 small nuclear ribonucleoprotein B'' pseudogene NW_004955512 1307791 1314557 + 102009866 AGCD01066638 MODEL 8914046 protein-coding Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 ENCODES a protein that exhibits ATPase activator activity (ortholog); Hsp70 protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 5 (ortholog); cerebrotendinous xanthomatosis (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955453 14147286 14154396 - 102010224 AGCD01044858;GBCE01074212;XM_005395542;XM_005395545;XM_013519969;XM_013519970 XP_005395599;XP_005395602;XP_013375423;XP_013375424 MODEL 8836267 protein-coding Czib CXXC motif containing zinc binding protein ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); carnitine palmitoyltransferase II deficiency (ortholog); colorectal cancer (ortholog) NW_004955464 5930805 5937061 + 102012413 AGCD01050015;GBCE01031785;XM_005398560;XM_013521688;XM_013521689;XM_013521690 XP_005398617;XP_013377142;XP_013377143;XP_013377144 MODEL 8819305 pseudo LOC102004287 S-phase kinase-associated protein 1 pseudogene NW_004955421 10942295 10942798 - 102004287 AGCD01021885 MODEL 8908319 ncrna LOC102007558 uncharacterized LOC102007558 NW_004955420 29057445 29063697 + 102007558 AGCD01021493;GBDF01157337;XR_001233702;XR_260770 MODEL 8972546 protein-coding Ap2b1 adaptor related protein complex 2 subunit beta 1 ENCODES a protein that exhibits clathrin binding (ortholog); clathrin-cargo adaptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); clathrin coat assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin adaptor complex (ortholog); clathrin coat (ortholog) NW_004955481 10061021 10175070 + 102017016 AGCD01057135;AGCD01057136;AGCD01057137;GBDF01008348;XM_005402876;XM_005402877;XM_005402881 XP_005402933;XP_005402934;XP_005402938 MODEL 8876304 protein-coding Adgrg2 adhesion G protein-coupled receptor G2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive congenital bilateral absence of vas deferens (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955586 359573 477277 + 102006515 AGCD01076031;GBDK01234833;XM_005414435;XM_013509887;XM_013509888;XM_013509889;XM_013509890;XM_013509891;XM_013509892;XM_013509893 XP_005414492;XP_013365341;XP_013365342;XP_013365343;XP_013365344;XP_013365345;XP_013365346;XP_013365347 MODEL 8911051 trna trnC(gca) tRNA-Cys MT 5191 5257 - 15822223 9057145 protein-coding B3glct beta 3-glucosyltransferase ENCODES a protein that exhibits glycosyltransferase activity (ortholog); O-fucosylpeptide 3-beta-glucosyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955431 14507184 14621376 - 102016185 AGCD01030330;AGCD01030331;AGCD01030332;AGCD01030333;GBDK01188717;XM_013515733 XP_013371187 MODEL 8843566 protein-coding Amtn amelotin INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 3A (ortholog); amelogenesis imperfecta type 3B (ortholog); cervical cancer (ortholog); FOUND IN basement membrane (ortholog); cell-cell junction (ortholog); extracellular matrix (ortholog) NW_004955447 2422189 2433633 - 102027025 AGCD01040542;XM_013518488 XP_013373942 MODEL 39133979 misc_rna 7SK 7SK RNA 8700157 protein-coding Brdt bromodomain testis associated ENCODES a protein that exhibits histone binding (ortholog); histone H4 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH azoospermia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955423 2434146 2498523 - 102027081 AGCD01023473;AGCD01023474;AGCD01023475;AGCD01023476;AGCD01023477;GBDF01048977;XM_005385061;XM_013514358;XM_013514359 XP_005385118;XP_013369812;XP_013369813 MODEL 8872589 protein-coding Cfap97 cilia and flagella associated protein 97 ASSOCIATED WITH colon adenocarcinoma (ortholog); dilated cardiomyopathy (ortholog); melanoma (ortholog) NW_004955403 23821502 23864809 + 102029140 AGCD01002257;AGCD01002258;AGCD01002259;AGCD01002260;AGCD01002261;GBDF01047888;XM_005373472;XM_005373474;XM_005373475;XM_005373476;XM_005373477;XM_005373478 XP_005373529;XP_005373531;XP_005373532;XP_005373533;XP_005373534;XP_005373535 MODEL 8791739 pseudo LOC102008331 cytoplasmic dynein 1 intermediate chain 2 pseudogene NW_004955500 4123771 4125723 + 102008331 AGCD01063770 MODEL 8888748 protein-coding Clns1a chloride nucleotide-sensitive channel 1A ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); lipid binding (ortholog); potassium channel activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); chloride transport (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); methylosome (ortholog) NW_004955414 14219909 14239450 + 102009271 AGCD01015143;AGCD01015144;GBDF01052362;XM_005379834;XM_013511809 XP_005379891;XP_013367263 MODEL 8738163 protein-coding Fkrp fukutin related protein ENCODES a protein that exhibits dystroglycan binding (ortholog); identical protein binding (ortholog); laminin binding (ortholog); INVOLVED IN adult walking behavior (ortholog); basement membrane organization (ortholog); bone mineralization (ortholog); ASSOCIATED WITH asthma (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2I (ortholog); FOUND IN cardiac myofibril (ortholog); catalytic complex (ortholog); cytoplasm (ortholog) NW_004955574 779672 789621 + 102017286 AGCD01075128;AGCD01075129;GBBH01007373;GBBH01007374;XM_013509559 XP_013365013 MODEL 9058724 protein-coding Ermap erythroblast membrane associated protein (Scianna blood group) ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955537 2340282 2360925 + 102016848 AGCD01070925;AGCD01070926;AGCD01070927;GBBH01072402;XM_013507744;XM_013507745 XP_013363198;XP_013363199 MODEL 8765764 protein-coding Cdc42bpb CDC42 binding protein kinase beta ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN actomyosin (ortholog); anchoring junction (ortholog); plasma membrane (ortholog) NW_004955538 2023681 2113213 - 102015447 AGCD01071095;AGCD01071096;AGCD01071097;GBCQ01038720;GBDF01126689;XM_013507874 XP_013363328 MODEL 8844690 pseudo LOC102006077 non-histone chromosomal protein HMG-14 pseudogene NW_004955547 2571567 2571850 - 102006077 AGCD01072283 MODEL 8755481 pseudo LOC102007178 stress-induced-phosphoprotein 1-like NW_004955404 10266595 10270280 + 102007178 AGCD01003377 MODEL 8922879 protein-coding LOC102011894 olfactory receptor 5AS1-like NW_004955511 949994 950932 + 102011894 AGCD01066346;XM_005408219 XP_005408276 MODEL 8753609 protein-coding Ca14 carbonic anhydrase 14 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955413 510089 516892 - 102018174 AGCD01013472;GBCB01024067;XM_005378696;XM_005378697;XM_013511467 XP_005378753;XP_005378754;XP_013366921 MODEL 8766831 pseudo LOC102005006 cyclin-G1 pseudogene NW_004955454 13232268 13233432 + 102005006 AGCD01045431 MODEL 8888104 protein-coding Plxnd1 plexin D1 ENCODES a protein that exhibits protein domain specific binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); aorta development (ortholog); branching involved in blood vessel morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN axon (ortholog); cell body (ortholog); glutamatergic synapse (ortholog) NW_004955429 17746814 17775072 + 102012112 AGCD01028866;GBBH01026681;GBDF01280799;XM_013515508 XP_013370962 MODEL 8867653 protein-coding LOC102022545 speckle-type POZ protein A-like NW_004955546 32587 33360 - 102022545 AGCD01071944;XM_005411814 XP_005411871 MODEL 8774326 protein-coding Rela RELA proto-oncogene, NF-kB subunit ENCODES a protein that exhibits actinin binding (ortholog); ankyrin repeat binding (ortholog); chromatin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antiviral innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN ceramide signaling pathway; interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adenocarcinoma (ortholog); alcohol dependence (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 19602930 19612263 + 102030643 AGCD01023023;AGCD01023024;GBCE01054806;GBDK01101045;XM_005384468 XP_005384525 MODEL 39134113 misc_rna 7SK 7SK RNA 8887956 ncrna LOC102008711 uncharacterized LOC102008711 NW_004955467 9917224 9927059 + 102008711 AGCD01051535;GBDF01226367;XR_001236854;XR_001236855 MODEL 8973560 protein-coding Atp13a2 ATPase cation transporting 13A2 ENCODES a protein that exhibits ABC-type polyamine transporter activity (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN autophagosome organization (ortholog); autophagosome-lysosome fusion (ortholog); autophagy (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); autistic disorder (ortholog); FOUND IN autophagosome (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955527 1805854 1823623 + 102025615 AGCD01069416;GBBH01034047;XM_005409823;XM_005409824 XP_005409880;XP_005409881 MODEL 9052203 ncrna LOC102018476 uncharacterized LOC102018476 NW_004955458 9702392 9709705 - 102018476 AGCD01047660;GBDI01338963;XR_001236457 MODEL 8783653 protein-coding Acsm1 acyl-CoA synthetase medium chain family member 1 ENCODES a protein that exhibits benzoate-CoA ligase activity (ortholog); decanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); PARTICIPATES IN butanoate metabolic pathway; fatty acid beta degradation pathway; valproic acid pharmacokinetics pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955442 4133817 4173932 + 102015458 AGCD01037520;GBDK01191442;XM_005391131;XM_013517947 XP_005391188;XP_013373401 MODEL 39131765 rrna 5S_rRNA 5S ribosomal RNA 8858390 protein-coding Adgrg3 adhesion G protein-coupled receptor G3 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); B cell differentiation (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955433 15290538 15317020 + 102003270 AGCD01031751;GBBH01016106;XM_005388403;XM_013516175;XM_013516176;XM_013516177 XP_005388460;XP_013371629;XP_013371630;XP_013371631 MODEL 9032764 protein-coding Aire autoimmune regulator ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN central tolerance induction to self antigen (ortholog); humoral immune response (ortholog); negative thymic T cell selection (ortholog); ASSOCIATED WITH anemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955407 41157503 41165032 - 102028160 AGCD01007859;GBBH01221976;XM_013505365;XM_013505368;XM_013505371;XM_013505374;XM_013505376 XP_013360819;XP_013360822;XP_013360825;XP_013360828;XP_013360830 MODEL 8930540 protein-coding Il9r interleukin 9 receptor ENCODES a protein that exhibits interleukin-9 binding (ortholog); interleukin-9 receptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955442 17115207 17128899 + 102010526 AGCD01037937;XM_013517828;XM_013517829 XP_013373282;XP_013373283 MODEL 9054134 protein-coding LOC102004653 olfactory receptor 7G2-like NW_004955563 384107 385063 - 102004653 AGCD01074064;XM_005413097 XP_005413154 MODEL 8993926 pseudo LOC102003226 ubiquitin-conjugating enzyme E2 G1 pseudogene NW_004955413 33482340 33483687 - 102003226 AGCD01014672 MODEL 8784868 protein-coding Wfdc3 WAP four-disulfide core domain 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955445 11501044 11512109 + 102029675 AGCD01039697;AGCD01039698;GBDF01119525;XM_005392415;XM_005392416;XM_005392418;XM_013518337;XM_013518339 XP_005392472;XP_005392473;XP_005392475;XP_013373791;XP_013373793 MODEL 8946411 protein-coding Sh3bgrl2 SH3 domain binding glutamate rich protein like 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); sarcoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955502 7517466 7575560 + 102008749 AGCD01064448;AGCD01064449;AGCD01064450;AGCD01064451;AGCD01064452;GBCE01135638;XM_005406914 XP_005406971 MODEL 8885357 protein-coding Ccdc154 coiled-coil domain containing 154 INVOLVED IN bone mineralization involved in bone maturation (ortholog); bone remodeling (ortholog); bone resorption (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive osteopetrosis 1 (ortholog); Breast Cancer, Familial (ortholog) NW_004955442 15792593 15800410 + 102026358 AGCD01037878;GBCE01124883;XM_005391542;XM_005391543;XM_005391544;XM_005391546;XM_005391547;XM_005391548 XP_005391599;XP_005391600;XP_005391601;XP_005391603;XP_005391604;XP_005391605 MODEL 8904572 protein-coding LOC102011040 olfactory receptor 56-like NW_004955530 191959 192906 + 102011040 AGCD01069832;XM_005410119 XP_005410176 MODEL 39131908 rrna 5S_rRNA 5S ribosomal RNA 730469460 misc_rna SOX2OT_exon2 SOX2 overlapping transcript exon 2 8839559 protein-coding Abcf1 ATP binding cassette subfamily F member 1 ENCODES a protein that exhibits ATP binding (ortholog); ribosome binding (ortholog); translation activator activity (ortholog); INVOLVED IN positive regulation of translation (ortholog); ribosome biogenesis (ortholog); translational initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear envelope (ortholog) NW_004955583 600381 607211 + 102004131 AGCD01075841;AGCD01075842;GBCE01052609;GBDK01129598;XM_013509796;XM_013509797 XP_013365250;XP_013365251 MODEL 8846488 protein-coding LOC102014213 general transcription factor II-I repeat domain-containing protein 2B NW_004955456 13308270 13349556 + 102014213 AGCD01046586;AGCD01046587;GBDF01261563;XM_005396734;XM_005396735;XM_013520535 XP_005396791;XP_005396792;XP_013375989 MODEL 9052746 protein-coding Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 INVOLVED IN anterior/posterior pattern specification (ortholog); apical protein localization (ortholog); establishment of body hair planar orientation (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH arteriovenous malformation (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955413 30455194 30561124 - 102011857 AGCD01014608;AGCD01014609;AGCD01014610;GBBH01034252;GBDI01067978;XM_013511386;XM_013511387 XP_013366840;XP_013366841 MODEL 8779708 protein-coding Cdc42bpg CDC42 binding protein kinase gamma ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 20331612 20350404 + 102026016 AGCD01023074;GBCQ01069831;XM_005384549;XM_013513970;XM_013513972;XM_013513973;XM_013513974;XM_013513975 XP_005384606;XP_013369424;XP_013369426;XP_013369427;XP_013369428;XP_013369429 MODEL 8919477 protein-coding Prorp protein only RNase P catalytic subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); INVOLVED IN mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 54 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrial ribonuclease P complex (ortholog) NW_004955409 25791209 25920651 - 102003843 AGCD01010138;AGCD01010139;AGCD01010140;AGCD01010141;GBCB01003766;XM_005376929;XM_005376930;XM_005376931 XP_005376986;XP_005376987;XP_005376988 MODEL 8995798 ncrna LOC102013834 uncharacterized LOC102013834 NW_004955421 71026 77156 - 102013834 AGCD01021542;GBDF01044878;XR_260781 MODEL 8725054 protein-coding Ap2m1 adaptor related protein complex 2 subunit mu 1 ENCODES a protein that exhibits clathrin-cargo adaptor activity (ortholog); disordered domain specific binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of protein localization to plasma membrane (ortholog); positive regulation of receptor internalization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 60 with seizures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog) NW_004955420 23281720 23290430 - 102026752 AGCD01021240;GBCB01006751;XM_005383348;XM_005383349 XP_005383405;XP_005383406 MODEL 9026124 ncrna LOC102009092 uncharacterized LOC102009092 NW_004955431 13020164 13023563 + 102009092 AGCD01030276;GBDF01210949;XR_261468 MODEL 8982394 protein-coding LOC102010292 olfactory receptor 1019 NW_004955511 1765100 1766038 + 102010292 AGCD01066379;XM_005407976 XP_005408033 MODEL 9056084 protein-coding Relb RELB proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to osmotic stress (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); atopic dermatitis (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytosol (ortholog) NW_004955555 2060533 2086229 + 102030482 AGCD01073127;AGCD01073128;AGCD01073129;GBCB01060771;GBDK01139724;XM_005412484;XM_013508745 XP_005412541;XP_013364199 MODEL 39134259 misc_rna 7SK 7SK RNA 8878333 protein-coding Lrmda leucine rich melanocyte differentiation associated INVOLVED IN melanocyte differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955437 15678397 16173214 - 102024845 AGCD01034694;AGCD01034695;AGCD01034696;AGCD01034697;AGCD01034698;AGCD01034699;AGCD01034700;GBCB01043098;XM_013516966 XP_013372420 MODEL 8885558 protein-coding Arhgap21 Rho GTPase activating protein 21 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN establishment of Golgi localization (ortholog); Golgi organization (ortholog); maintenance of Golgi location (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell junction (ortholog); Golgi apparatus (ortholog) NW_004955429 4424425 4559596 + 102009304 AGCD01028489;AGCD01028490;AGCD01028491;AGCD01028492;AGCD01028493;GBDJ01053058;XM_005386906;XM_005386908;XM_005386909;XM_013515486 XP_005386963;XP_005386965;XP_005386966;XP_013370940 MODEL 8989846 protein-coding Dnajb3 DnaJ heat shock protein family (Hsp40) member B3 FOUND IN acrosomal vesicle (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955453 2399155 2400158 + 102005993 AGCD01044626;GBDF01008616;XM_005395337 XP_005395394 MODEL 8807997 pseudo LOC102006081 26S protease regulatory subunit 4 pseudogene NW_004955444 10175071 10176371 - 102006081 AGCD01039007;XR_262256 MODEL 8717861 ncrna LOC102012280 uncharacterized LOC102012280 NW_004955455 541374 542760 - 102012280 AGCD01045560;GBDF01021764;XR_262806 MODEL 9017928 protein-coding Clock clock circadian regulator ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN chromatoid body (ortholog); chromosome (ortholog); CLOCK-BMAL transcription complex (ortholog) NW_004955447 15394496 15537969 + 102005090 AGCD01041053;AGCD01041054;AGCD01041055;AGCD01041056;AGCD01041057;AGCD01041058;GBDI01055718;XM_005392886;XM_005392887;XM_005392888;XM_005392889;XM_005392890;XM_005392891;XM_005392892;XM_013518507;XM_013518509;XM_013518510;XM_013518511;XM_013518512 XP_005392943;XP_005392944;XP_005392945;XP_005392946;XP_005392947;XP_005392948;XP_005392949;XP_013373961;XP_013373963;XP_013373964;XP_013373965;XP_013373966 MODEL 8917395 protein-coding LOC102007561 vomeronasal type-1 receptor 48-like NW_004955421 21854981 21855904 - 102007561 AGCD01022122;XM_005383930 XP_005383987 MODEL 8724894 protein-coding Slc43a2 solute carrier family 43 member 2 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); L-isoleucine transmembrane transporter activity (ortholog); L-leucine transmembrane transporter activity (ortholog); INVOLVED IN isoleucine transport (ortholog); L-amino acid transport (ortholog); L-leucine transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955481 1550289 1597213 + 102019390 AGCD01056836;AGCD01056837;AGCD01056838;GBDF01222975;XM_005402617;XM_005402618;XM_013503413 XP_005402674;XP_005402675;XP_013358867 MODEL 8943569 protein-coding D2hgdh D-2-hydroxyglutarate dehydrogenase ENCODES a protein that exhibits (R)-2-hydroxyglutarate dehydrogenase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN lactate metabolic process (ortholog); malate metabolic process (ortholog); protein destabilization (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); amino acid metabolic disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955542 99379 130447 - 102003906 AGCD01071456;AGCD01071457;GBCE01077173;XM_005411112;XM_005411114;XM_013508084;XM_013508085;XM_013508086;XR_001232164 XP_005411169;XP_005411171;XP_013363538;XP_013363539;XP_013363540 MODEL 8827123 pseudo LOC102005007 succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial pseudogene NW_004955454 12974527 12986293 + 102005007 AGCD01045425 MODEL 9029381 protein-coding Rtn4ip1 reticulon 4 interacting protein 1 ENCODES a protein that exhibits NADH dehydrogenase (quinone) (non-electrogenic) activity (ortholog); NADPH dehydrogenase (quinone) activity (ortholog); INVOLVED IN regulation of dendrite development (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955411 31902848 31950645 - 102007315 AGCD01012289;GBCQ01127142;XM_005377832 XP_005377889 MODEL 8861576 ncrna LOC102013495 uncharacterized LOC102013495 NW_004955468 8052975 8220399 + 102013495 AGCD01052019;AGCD01052020;AGCD01052021;AGCD01052022;AGCD01052023;GBCQ01143499;XR_001236948;XR_263403;XR_263404 MODEL 8740336 protein-coding LOC102008712 oxidized low-density lipoprotein receptor 1 NW_004955413 7662314 7721687 + 102008712 AGCD01013828;AGCD01013829;AGCD01013830;GBDF01111532;XM_005378938 XP_005378995 MODEL 8963609 protein-coding B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to leukemia inhibitory factor (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH Graves' disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); rheumatoid arthritis (ortholog) NW_004955424 21859901 21888722 - 102018944 AGCD01024912;AGCD01024913;GBCC01012841;XM_005385732 XP_005385789 MODEL 9052734 protein-coding Amz1 archaelysin family metallopeptidase 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955460 12631296 12649891 - 102011846 AGCD01048661;GBCE01079732;XM_013521144;XM_013521145;XM_013521146;XM_013521147 XP_013376598;XP_013376599;XP_013376600;XP_013376601 MODEL 8932432 protein-coding Acsm2b acyl-CoA synthetase medium chain family member 2B ENCODES a protein that exhibits benzoate-CoA ligase activity (ortholog); decanoate-CoA ligase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955442 4083805 4105324 + 102014950 AGCD01037517;AGCD01037518;AGCD01037519;GBCQ01124686;XM_005391129;XM_005391130 XP_005391186;XP_005391187 MODEL 9028732 protein-coding Cfap97d1 CFAP97 domain containing 1 INVOLVED IN sperm axoneme assembly (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 17072403 17077642 + 102006197 AGCD01043717;GBDF01007435;XM_005394509 XP_005394566 MODEL 8996406 pseudo LOC102009870 deoxycytidine kinase-like NW_004955435 5992632 5993789 - 102009870 AGCD01032903 MODEL 8884037 protein-coding Ermard ER membrane associated RNA degradation ASSOCIATED WITH periventricular nodular heterotopia (ortholog); periventricular nodular heterotopia 6 (ortholog) NW_004955411 3838125 3866282 - 102018814 AGCD01011556;GBDK01058947;XM_005377629;XM_005377630;XM_005377631;XM_005377632;XM_005377633;XM_005377634;XM_013510740;XM_013510742 XP_005377686;XP_005377687;XP_005377688;XP_005377689;XP_005377690;XP_005377691;XP_013366194;XP_013366196 MODEL 8780571 ncrna LOC102003227 uncharacterized LOC102003227 NW_004955469 7027260 7028336 + 102003227 AGCD01052404;GBBH01203178;XR_263433 MODEL 39134260 misc_rna 7SK 7SK RNA 8907098 protein-coding Wfdc5 WAP four-disulfide core domain 5 NW_004955445 12279799 12284819 + 102013123 AGCD01039749;GBDJ01360367;XM_005392453 XP_005392510 MODEL 8988308 protein-coding Ca2 carbonic anhydrase 2 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); cyanamide hydratase activity (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); carbon dioxide transport (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcoholic pancreatitis (ortholog); autism spectrum disorder (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955417 3388110 3402798 + 102009177 AGCD01017914;GBBH01090608;GBCB01007542;XM_013512866 XP_013368320 MODEL 8888669 trna trnD(gtc) tRNA-Asp MT 6950 7017 + 15822226 8770681 ncrna LOC102022546 uncharacterized LOC102022546 NW_004955552 1838636 1865550 - 102022546 AGCD01072789;AGCD01072790;AGCD01072791;GBDI01143786;XR_001232278;XR_264926 MODEL 39133980 misc_rna 7SK 7SK RNA 39131766 rrna 5S_rRNA 5S ribosomal RNA 8925763 pseudo LOC102018480 nucleosome assembly protein 1-like 1 pseudogene NW_004955411 3844425 3845502 - 102018480 AGCD01011556 MODEL 8980514 protein-coding Slc44a1 solute carrier family 44 member 1 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ethanolamine transport (ortholog); transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Childhood-onset Neurodegeneration with Ataxia, Tremor, Optic Atrophy, and Cognitive Decline (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955419 21092583 21277294 - 102029297 AGCD01020265;AGCD01020266;AGCD01020267;AGCD01020268;AGCD01020269;AGCD01020270;GBCQ01164971;XM_005382780 XP_005382837 MODEL 8976579 protein-coding Atp13a3 ATPase 13A3 ENCODES a protein that exhibits ABC-type putrescine transporter activity (ortholog); P-type transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); recycling endosome membrane (ortholog) NW_004955420 14295844 14375325 + 102027857 AGCD01020940;AGCD01020941;AGCD01020942;AGCD01020943;GBCB01040232;XM_013513495;XM_013513496;XM_013513497;XM_013513498;XM_013513499;XM_013513500;XM_013513501;XM_013513502;XR_001233745;XR_001233746 XP_013368949;XP_013368950;XP_013368951;XP_013368952;XP_013368953;XP_013368954;XP_013368955;XP_013368956 MODEL 8717791 pseudo LOC102008333 thrombospondin type-1 domain-containing protein 1-like NW_004955426 16226528 16227149 - 102008333 AGCD01026464 MODEL 9045481 protein-coding Adgrg4 adhesion G protein-coupled receptor G4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955489 8690268 8801358 - 102023606 AGCD01060021;XM_005404615 XP_005404672 MODEL 8823184 protein-coding Cdc42ep1 CDC42 effector protein 1 INVOLVED IN positive regulation of pseudopodium assembly (ortholog); regulation of cell shape (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955413 23984691 23987753 + 102005581 AGCD01014344;GBCE01054100;GBCQ01122342;XM_005379207 XP_005379264 MODEL 8901494 protein-coding LOC102013837 olfactory receptor 4C46-like NW_004955422 183190 184119 + 102013837 AGCD01022401;XM_005383940 XP_005383997 MODEL 8976625 protein-coding Fktn fukutin ENCODES a protein that exhibits phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2M (ortholog); FOUND IN catalytic complex (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955419 20933662 20994793 - 102028090 AGCD01020258;AGCD01020259;AGCD01020260;AGCD01020261;AGCD01020262;GBCE01181662;XM_005382776;XM_013513225 XP_005382833;XP_013368679 MODEL 8884636 pseudo LOC102009093 60S ribosomal protein L5-like NW_004955431 17585076 17587986 - 102009093 AGCD01030409 MODEL 8880337 ncrna LOC102004288 uncharacterized LOC102004288 NW_004955422 13815996 13839961 + 102004288 AGCD01022838;AGCD01022839;GBDI01205369;XR_001233902;XR_260874;XR_260875 MODEL 8975253 protein-coding LOC102004655 zinc finger protein 709-like NW_004955569 1219307 1247738 - 102004655 AGCD01074645;GBDI01176345;XM_005413497 XP_005413554 MODEL 8806508 pseudo LOC102010293 olfactory receptor 10AG1-like NW_004955511 885492 889414 - 102010293 AGCD01066346 MODEL 9018750 ncrna LOC102011899 uncharacterized LOC102011899 NW_004955517 51555 54459 - 102011899 AGCD01067565;GBDK01097081;XR_264538 MODEL 9033711 protein-coding LOC102007180 60S ribosomal protein L31 NW_004955404 47061481 47061923 + 102007180 AGCD01004474;XM_005374211 XP_005374268 MODEL 39131909 rrna 5S_rRNA 5S ribosomal RNA 8723537 protein-coding Sh3bgrl3 SH3 domain binding glutamate rich protein like 3 ENCODES a protein that exhibits glutathione transferase activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); ruffle membrane (ortholog) NW_004955452 5683276 5684760 + 102015367 AGCD01044051;GBDF01000998;XM_005394851 XP_005394908 MODEL 8860755 ncrna LOC102011050 uncharacterized LOC102011050 NW_004955440 19071638 19074811 - 102011050 AGCD01036626;GBDF01013047;XR_262047 MODEL 8836713 pseudo LOC102006086 diphosphoinositol polyphosphate phosphohydrolase 2 pseudogene NW_004955594 540020 541200 + 102006086 AGCD01076434 MODEL 9039742 protein-coding Pm20d1 peptidase M20 domain containing 1 ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); amino acid metabolic process (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 41522800 41544332 - 102014210 AGCD01006685;GBDI01244269;XM_005375377 XP_005375434 MODEL 8946988 ncrna LOC102012281 uncharacterized LOC102012281 NW_004955456 10060816 10063097 + 102012281 AGCD01046517;GBDF01293625;XR_262891 MODEL 9005752 protein-coding Clp1 cleavage factor polyribonucleotide kinase subunit 1 ENCODES a protein that exhibits ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity (ortholog); INVOLVED IN cerebellar cortex development (ortholog); regulation of mRNA 3'-end processing (ortholog); RISC complex assembly (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; tRNA maturation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN mRNA cleavage factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955511 2588825 2592108 + 102020149 AGCD01066418;GBDF01051886;XM_005408004;XM_005408005;XM_005408006;XM_013506485;XM_013506486 XP_005408061;XP_005408062;XP_005408063;XP_013361939;XP_013361940 MODEL 8723480 ncrna LOC102014216 uncharacterized LOC102014216 NW_004955408 22585567 22590646 - 102014216 AGCD01008578;GBDF01208907;XR_001231743 MODEL 8919558 protein-coding Abcf2 ATP binding cassette subfamily F member 2 ASSOCIATED WITH Disease Progression (ortholog); FOUND IN cytosol (ortholog) NW_004955491 5630543 5642246 - 102007562 AGCD01060493;GBDF01000389;XM_005404829;XM_013504622;XM_013504623;XM_013504624 XP_005404886;XP_013360076;XP_013360077;XP_013360078 MODEL 8882319 protein-coding Celsr2 cadherin EGF LAG seven-pass G-type receptor 2 INVOLVED IN cerebrospinal fluid secretion (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955435 12671759 12695070 + 102025836 AGCD01033162;GBBH01034256;GBCE01115246;XM_005389103 XP_005389160 MODEL 8959169 protein-coding Daam1 dishevelled associated activator of morphogenesis 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955466 12954557 13129483 + 102006889 AGCD01051147;AGCD01051148;AGCD01051149;AGCD01051150;GBDF01188476;XM_005399225;XM_005399226;XM_013521989;XM_013521990;XM_013521991 XP_005399282;XP_005399283;XP_013377443;XP_013377444;XP_013377445 MODEL 8720813 protein-coding Pros1 protein S ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN liver development (ortholog); negative regulation of coagulation (ortholog); positive regulation of phagocytosis (ortholog); PARTICIPATES IN protein C anticoagulant pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autosomal dominant thrombophilia due to protein S deficiency (ortholog); autosomal recessive thrombophilia due to protein S deficiency (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955407 3514900 3566165 + 102002997 AGCD01006863;GBCQ01040731;GBDF01157496;XM_013503591 XP_013359045 MODEL 9010182 trna trnE(ttc) tRNA-Glu MT 14092 14160 - 15822214 8962386 protein-coding Ap2s1 adaptor related protein complex 2 subunit sigma 1 INVOLVED IN postsynaptic neurotransmitter receptor internalization (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN AP-2 adaptor complex (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); glutamatergic synapse (ortholog) NW_004955574 835272 845710 - 102030361 AGCD01075131;GBDK01017755;XM_005413843;XM_005413844 XP_005413900;XP_005413901 MODEL 9042402 protein-coding Ildr1 immunoglobulin like domain containing receptor 1 ENCODES a protein that exhibits high-density lipoprotein particle receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); epithelial structure maintenance (ortholog); positive regulation of peptide hormone secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); angiokeratoma (ortholog); aortic aneurysm (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955427 21304460 21333170 - 102007792 AGCD01027440;GBCQ01175397;XM_005386503;XM_013515104;XM_013515105;XM_013515106;XM_013515107;XM_013515108;XM_013515109 XP_005386560;XP_013370558;XP_013370559;XP_013370560;XP_013370561;XP_013370562;XP_013370563 MODEL 8772730 protein-coding Relch RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing INVOLVED IN intracellular cholesterol transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN recycling endosome (ortholog); trans-Golgi network (ortholog) NW_004955402 46114835 46226330 + 102019972 AGCD01001151;AGCD01001152;AGCD01001153;AGCD01001154;GBDK01224883;XM_005373018;XM_005373019;XM_013511190;XM_013511192;XM_013511197;XR_001232916 XP_005373075;XP_005373076;XP_013366644;XP_013366646;XP_013366651 MODEL 8728857 protein-coding Slc44a2 solute carrier family 44 member 2 (CTL2 blood group) ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ethanolamine transport (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955495 1780766 1804944 + 102008235 AGCD01061730;AGCD01061731;GBDK01014784;XM_005405608;XM_005405609 XP_005405665;XP_005405666 MODEL 8848448 protein-coding Ccdc157 coiled-coil domain containing 157 ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); sarcoma (ortholog) NW_004955455 4601941 4616385 + 102019138 AGCD01045681;GBCE01141676;XM_005396253;XM_005396254;XM_005396255;XM_005396256;XM_005396257 XP_005396310;XP_005396311;XP_005396312;XP_005396313;XP_005396314 MODEL 8847617 protein-coding Cfap99 cilia and flagella associated protein 99 NW_004955514 1451451 1490251 + 102023512 AGCD01067050;AGCD01067051;AGCD01067052;AGCD01067053;GBCE01032631;GBDK01283997;XM_005408729;XM_013506810 XP_005408786;XP_013362264 MODEL 8920199 protein-coding Acsm3 acyl-CoA synthetase medium chain family member 3 ENCODES a protein that exhibits 2-methylbutanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); hypertension (ortholog); IgA glomerulonephritis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955493 73306 95521 + 102030541 AGCD01060837;AGCD01060838;GBCQ01008878;XM_005405036 XP_005405093 MODEL 730469559 misc_rna SOX2OT_exon3 SOX2 overlapping transcript exon 3 8872991 protein-coding Ermn ermin ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); morphogenesis of a branching structure (ortholog); regulation of cell projection organization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); filopodium (ortholog) NW_004955449 16056735 16064734 + 102017079 AGCD01042208;GBDK01341423;XM_005393411 XP_005393468 MODEL 9005202 protein-coding Wfdc8 WAP four-disulfide core domain 8 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955445 11666987 11682180 + 102030679 AGCD01039712;XM_013518242 XP_013373696 MODEL 9005359 pseudo LOC102005009 septin-2-like NW_004955457 11878770 11880262 - 102005009 AGCD01046992 MODEL 8764564 protein-coding Rtn4r reticulon 4 receptor ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); ganglioside GM1 binding (ortholog); ganglioside GT1b binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell surface receptor signaling pathway (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); schizophrenia (ortholog); FOUND IN axonal growth cone (ortholog); cell surface (ortholog); dendritic shaft (ortholog) NW_004955442 17866508 17891803 + 102021054 AGCD01037988;GBCE01016565;XM_005391722 XP_005391779 MODEL 8788464 protein-coding Airim AFG2 interacting ribosome maturation factor INVOLVED IN DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN ATPase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955452 15477253 15486400 - 102013140 AGCD01044486;GBDF01001402;XM_013519696;XM_013519697;XM_013519698 XP_013375150;XP_013375151;XP_013375152 MODEL 8924920 ncrna LOC102008719 uncharacterized LOC102008719 NW_004955474 1262389 1267127 - 102008719 AGCD01054244;AGCD01054245;GBDI01098588;XR_263586 MODEL 8966777 protein-coding B3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955524 3432797 3436941 - 102014706 AGCD01068897;GBBH01142850;GBDI01063068;XM_005409543 XP_005409600 MODEL 39134114 misc_rna 7SK 7SK RNA 9050174 protein-coding Adgrg5 adhesion G protein-coupled receptor G5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955433 15156116 15209824 + 102030113 AGCD01031746;AGCD01031747;AGCD01031748;GBDI01290202;XM_005388400;XM_005388401;XM_013516255;XM_013516256 XP_005388457;XP_005388458;XP_013371709;XP_013371710 MODEL 9060759 protein-coding LOC102010294 chromosome unknown open reading frame, human C4orf50 NW_004955514 4112935 4206895 + 102010294 AGCD01067127;AGCD01067128;GBDF01183618;XM_005408860 XP_005408917 MODEL 8705779 protein-coding LOC102007563 uncharacterized LOC102007563 NW_004955493 470268 489066 - 102007563 AGCD01060852;AGCD01060853;AGCD01060854;GBDJ01366389;XM_013504742 XP_013360196 MODEL 8762860 protein-coding Cdc42ep2 CDC42 effector protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); opioid peptide activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to type II interferon (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); microtubule cytoskeleton (ortholog) NW_004955422 19922179 19928570 - 102011673 AGCD01023048;GBDK01005932;XM_005384501;XM_005384502;XM_013514219;XM_013514220 XP_005384558;XP_005384559;XP_013369673;XP_013369674 MODEL 9039915 protein-coding Dnajb4 DnaJ heat shock protein family (Hsp40) member B4 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-folding chaperone binding (ortholog); ASSOCIATED WITH congenital myopathy 21 (ortholog); distal myopathy (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955423 15212579 15245538 - 102017031 AGCD01023799;AGCD01023800;GBDJ01050466;XM_005385208;XM_005385209;XM_005385210;XM_005385211;XM_005385212;XM_013514427 XP_005385265;XP_005385266;XP_005385267;XP_005385268;XP_005385269;XP_013369881 MODEL 8952183 pseudo LOC102011905 dnaJ homolog subfamily A member 1 pseudogene NW_004955526 2793294 2822895 + 102011905 AGCD01069321 MODEL 8781949 protein-coding LOC102007188 torsin-1A-interacting protein 2 NW_004955406 19092006 19122814 - 102007188 AGCD01006074;GBBH01032401;XM_005374979;XM_005374980;XM_005374981;XM_013521267;XM_013521272;XM_013521279;XM_013521287 XP_005375036;XP_005375037;XP_005375038;XP_013376721;XP_013376726;XP_013376733;XP_013376741 MODEL 8719051 protein-coding Ca3 carbonic anhydrase 3 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); nickel cation binding (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); cellular response to leptin stimulus (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); Binge Drinking (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955417 3362091 3372270 + 102004705 AGCD01017912;GBDF01125791;XM_005381744;XM_013512802;XM_013512803;XM_013512804 XP_005381801;XP_013368256;XP_013368257;XP_013368258 MODEL 8873994 ncrna LOC102022552 uncharacterized LOC102022552 NW_004955402 19749867 19763274 - 102022552 AGCD01000567;GBDF01262712;XR_259059 MODEL 39133981 misc_rna 7SK 7SK RNA 8836750 protein-coding Sh3bp1 SH3 domain binding protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); semaphorin receptor binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell junction assembly (ortholog); cell migration (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cell leading edge (ortholog) NW_004955413 24042875 24054826 + 102007419 AGCD01014345;AGCD01014346;GBBH01092698;XM_005379214 XP_005379271 MODEL 9005605 ncrna LOC102013496 uncharacterized LOC102013496 NW_004955414 14859238 14895910 - 102013496 AGCD01015161;GBDF01156200;XR_260169;XR_260170 MODEL 39131767 rrna 5S_rRNA 5S ribosomal RNA 8756375 ncrna LOC102018485 uncharacterized LOC102018485 NW_004955468 12167937 12170801 - 102018485 AGCD01052145;GBCQ01188108;XR_001236937;XR_263417 MODEL 39131442 protein-coding LRMDA leucine rich melanocyte differentiation associated 8863651 protein-coding Amz2 archaelysin family metallopeptidase 2 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955478 4477597 4485918 - 102029394 AGCD01055851;GBCQ01064160;XM_005402126;XM_005402131;XM_013503246;XM_013503247;XM_013503248;XM_013503249 XP_005402183;XP_005402188;XP_013358700;XP_013358701;XP_013358702;XP_013358703 MODEL 9010277 protein-coding Atp13a4 ATPase 13A4 INVOLVED IN intracellular calcium ion homeostasis (ortholog); polyamine transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); late endosome membrane (ortholog) NW_004955420 15032370 15179190 + 102008320 AGCD01020962;AGCD01020963;AGCD01020964;AGCD01020965;AGCD01020966;GBDK01071090;XM_005383209 XP_005383266 MODEL 8778106 protein-coding Celsr3 cadherin EGF LAG seven-pass G-type receptor 3 INVOLVED IN axonal fasciculation (ortholog); cilium assembly (ortholog); dopaminergic neuron axon guidance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog); presynaptic active zone membrane (ortholog) NW_004955532 724306 749192 - 102028795 AGCD01070149;GBDI01021516;XM_005410158;XM_005410159;XM_005410161;XR_001232023 XP_005410215;XP_005410216;XP_005410218 MODEL 8752687 protein-coding Abcf3 ATP binding cassette subfamily F member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955420 23271925 23280988 - 102026431 AGCD01021240;GBCQ01005116;XM_005383346 XP_005383403 MODEL 8851767 ncrna LOC102013839 uncharacterized LOC102013839 NW_004955422 18995156 19011808 - 102013839 AGCD01022970;GBDJ01159275;XR_260897 MODEL 8870140 protein-coding Daam2 dishevelled associated activator of morphogenesis 2 INVOLVED IN determination of left/right symmetry (ortholog); dorsal spinal cord development (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955437 6728703 6839903 + 102030565 AGCD01034443;AGCD01034444;GBDI01353991;XM_005389656;XM_005389657;XM_013516989;XM_013516990 XP_005389713;XP_005389714;XP_013372443;XP_013372444 MODEL 8989141 ncrna LOC102009882 uncharacterized LOC102009882 NW_004955545 1976556 1983940 - 102009882 AGCD01071876;AGCD01071877;GBDI01212919;XR_001232185 MODEL 8911090 ncrna LOC102004289 uncharacterized LOC102004289 NW_004955492 6522268 6526985 - 102004289 AGCD01060768;GBDF01157405;XR_264058 MODEL 8831559 protein-coding Flacc1 flagellum associated containing coiled-coil domains 1 ASSOCIATED WITH anthracosis (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); outer dense fiber (ortholog) NW_004955403 264969 321370 + 102021407 AGCD01001685;AGCD01001686;AGCD01001687;AGCD01001688;GBDK01061068;XM_005373202;XM_013511720;XM_013511724;XM_013511729 XP_005373259;XP_013367174;XP_013367178;XP_013367183 MODEL 8907540 protein-coding LOC102004656 UDP-glucuronosyltransferase 2B14-like NW_004955447 4066107 4075826 + 102004656 AGCD01040701;AGCD01040702;GBDJ01380770;XM_005392809;XM_013518529 XP_005392866;XP_013373983 MODEL 39134261 misc_rna 7SK 7SK RNA 8843741 protein-coding Arhgap22 Rho GTPase activating protein 22 INVOLVED IN regulation of postsynapse organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); long QT syndrome (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955556 1462366 1588589 + 102007820 AGCD01073194;AGCD01073195;AGCD01073196;AGCD01073197;GBCE01045808;XM_005412590 XP_005412647 MODEL 8888378 protein-coding Slc44a3 solute carrier family 44 member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955435 3851 80691 + 102023947 AGCD01032711;GBCE01127157;GBDI01354385;XM_005388779;XM_005388780;XM_013516523;XM_013516524;XM_013516525 XP_005388836;XP_005388837;XP_013371977;XP_013371978;XP_013371979 MODEL 39131910 rrna 5S_rRNA 5S ribosomal RNA 8852395 protein-coding LOC102006087 vegetative cell wall protein gp1-like NW_004955450 9118960 9126357 + 102006087 AGCD01042585;GBBH01149209;XM_013518830 XP_013374284 MODEL 8863969 protein-coding LOC102011051 tetratricopeptide repeat protein 39B-like NW_004955441 6423398 6437402 + 102011051 AGCD01036920;GBDF01008292;XM_005390888 XP_005390945 MODEL 8948869 protein-coding Pm20d2 peptidase M20 domain containing 2 ENCODES a protein that exhibits dipeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN proteolysis (ortholog); regulation of protein metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955411 15932367 15943946 + 102017434 AGCD01011962;GBCQ01101234;GBDI01384473;XM_013510884 XP_013366338 MODEL 8930836 protein-coding Clpb ClpB family mitochondrial disaggregase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent protein disaggregase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to heat (ortholog); granulocyte differentiation (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); 3-methylglutaconic aciduria type 7a (ortholog); 3-methylglutaconic aciduria type 7b (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955414 18968144 19106241 + 102025453 AGCD01015297;GBDF01006462;XM_005379988;XM_005379989 XP_005380045;XP_005380046 MODEL 9001773 protein-coding Proser1 proline and serine rich 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955431 7288594 7314393 + 102018756 AGCD01030083;AGCD01030084;GBBH01192909;GBDF01277260;XM_005387643 XP_005387700 MODEL 8786186 ncrna LOC102009094 uncharacterized LOC102009094 NW_004955432 20999224 21001060 + 102009094 AGCD01031213;GBDF01304667;XR_261541 MODEL 8789723 protein-coding LOC102005010 vomeronasal type-2 receptor 116-like NW_004955457 13422847 13441378 - 102005010 AGCD01047044;XM_005397122 XP_005397179 MODEL 8715614 protein-coding Ap3b1 adaptor related protein complex 3 subunit beta 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); GTP-dependent protein binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autoimmune hemolytic anemia (ortholog); autoimmune thrombocytopenic purpura (ortholog); FOUND IN microvesicle (ortholog) NW_004955425 22792616 23051509 + 102015649 AGCD01025833;AGCD01025834;AGCD01025835;AGCD01025836;AGCD01025837;AGCD01025838;GBDF01157461;XM_005386022 XP_005386079 MODEL 8881072 protein-coding LOC102003231 protocadherin beta-12 NW_004955415 12598599 12600263 - 102003231 AGCD01016205;GBDF01191900;XM_005381127 XP_005381184 MODEL 8858369 protein-coding Ildr2 immunoglobulin like domain containing receptor 2 INVOLVED IN cell differentiation (ortholog); homeostasis of number of cells within a tissue (ortholog); insulin secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleus (ortholog); tight junction (ortholog) NW_004955462 9953393 10016339 + 102030613 AGCD01049346;AGCD01049347;AGCD01049348;AGCD01049349;AGCD01049350;GBCE01147847;GBDF01303897;XM_013521459 XP_013376913 MODEL 39134115 misc_rna 7SK 7SK RNA 8750355 protein-coding Rell1 RELT like 1 INVOLVED IN positive regulation of p38MAPK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955443 9461570 9526986 + 102009997 AGCD01038357;GBCE01152742;XM_005392010;XM_013518114 XP_005392067;XP_013373568 MODEL 8988258 protein-coding LOC102007567 uncharacterized LOC102007567 NW_004955494 1182666 1184612 - 102007567 AGCD01061392;GBDI01027077;XM_005405391 XP_005405448 MODEL 8963910 protein-coding Brf1 BRF1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of mRNA stability (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog) NW_004955538 3469322 3544704 - 102005507 AGCD01071164;AGCD01071165;AGCD01071166;AGCD01071167;AGCD01071168;AGCD01071169;GBCB01026253;GBDI01136185;XM_005410860 XP_005410917 MODEL 8905107 pseudo LOC102011909 ATP synthase F(0) complex subunit C2, mitochondrial pseudogene NW_004955538 2556303 2557233 + 102011909 AGCD01071128 MODEL 9003609 protein-coding Acsm4 acyl-CoA synthetase medium chain family member 4 ENCODES a protein that exhibits decanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); fatty-acyl-CoA synthase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955493 6023 31418 + 102028428 AGCD01060835;GBBH01184454;XM_005405028 XP_005405085 MODEL 9060627 protein-coding Cfb complement factor B ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, alternative pathway (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); age related macular degeneration 14 (ortholog); anterior uveitis (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of Golgi membrane (ortholog); extracellular region (ortholog) NW_004955437 461235 466908 + 102005413 AGCD01034137;GBBH01002155;XM_005389399 XP_005389456 MODEL 9055693 protein-coding LOC102012282 uroplakin-3b-like protein NW_004955456 15093798 15098628 + 102012282 AGCD01046662;GBDJ01177525;XM_005396824;XM_013520654 XP_005396881;XP_013376108 MODEL 8923466 ncrna LOC102014221 uncharacterized LOC102014221 NW_004955463 3968794 3970059 - 102014221 AGCD01049600;GBDF01080280;XR_263143 MODEL 8714545 pseudo LOC102008336 60S ribosomal protein L13 pseudogene NW_004955508 1222169 1222822 + 102008336 AGCD01065759 MODEL 8802108 protein-coding Ermp1 endoplasmic reticulum metallopeptidase 1 INVOLVED IN cellular response to oxidative stress (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic kidney disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955434 9772667 9825048 - 102012355 AGCD01032309;AGCD01032310;GBDF01156541;XM_013516296 XP_013371750 MODEL 8735794 protein-coding Dnajb5 DnaJ heat shock protein family (Hsp40) member B5 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); response to unfolded protein (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); neuropathy (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955472 1168568 1177849 - 102016468 AGCD01053378;GBBH01050211;GBCB01001318;XM_013523026 XP_013378480 MODEL 8846350 pseudo LOC102007193 keratin-associated protein 12-1-like NW_004955407 41612826 41613140 + 102007193 AGCD01007872 MODEL 9012587 pseudo LOC102013497 programmed cell death protein 5 pseudogene NW_004955414 20055216 20055636 - 102013497 AGCD01015354 MODEL 8870672 ncrna LOC102022555 uncharacterized LOC102022555 NW_004955450 3762810 3767772 + 102022555 AGCD01042444;GBDF01250880;XR_001235838 MODEL 8950258 protein-coding Ajap1 adherens junctions associated protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); negative regulation of wound healing (ortholog); regulation of polarized epithelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955486 7333663 7441686 - 102020570 AGCD01059129;AGCD01059130;AGCD01059131;GBCQ01143431;XM_005404124 XP_005404181 MODEL 8817344 protein-coding Rtn4rl1 reticulon 4 receptor like 1 ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparin binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN corpus callosum development (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of neuron projection development (ortholog); FOUND IN cell surface (ortholog); membrane raft (ortholog); perikaryon (ortholog) NW_004955481 1209429 1277309 + 102013083 AGCD01056828;AGCD01056829;AGCD01056830;GBCE01021884;XM_005402600;XM_005402601;XM_013503376;XM_013503377;XR_263758;XR_263759;XR_263760;XR_263761;XR_263762 XP_005402657;XP_005402658;XP_013358830;XP_013358831 MODEL 8746899 pseudo LOC102008721 28S ribosomal protein S36, mitochondrial pseudogene NW_004955476 2667352 2667663 - 102008721 AGCD01055231 MODEL 8777274 protein-coding Sh3bp2 SH3 domain binding protein 2 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); SH3 domain binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); Bone Fractures (ortholog) NW_004955514 1700889 1730002 + 102026459 AGCD01067061;AGCD01067062;GBDF01124956;XM_005408740;XM_005408741;XM_013506799;XM_013506800;XM_013506801;XM_013506802 XP_005408797;XP_005408798;XP_013362253;XP_013362254;XP_013362255;XP_013362256 MODEL 8859173 protein-coding Atp13a5 ATPase 13A5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog) NW_004955420 15200164 15303906 + 102008000 AGCD01020968;GBDJ01180966;XM_005383208 XP_005383265 MODEL 8887677 ncrna LOC102005017 uncharacterized LOC102005017 NW_004955466 5718966 5721167 + 102005017 AGCD01050888;GBDF01281132;XR_001236796 MODEL 8957328 protein-coding Abcg1 ATP binding cassette subfamily G member 1 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cellular response to high density lipoprotein particle stimulus (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955407 39410262 39459383 - 102015605 AGCD01007825;AGCD01007826;GBCQ01150155;XM_005375832;XM_005375833 XP_005375889;XP_005375890 MODEL 10170936 protein-coding B3gnt4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); urinary bladder cancer (ortholog) NW_004955482 6359967 6365344 - 106146514 AGCD01057387;GBCE01084791;GBDJ01028511;XM_013503651 XP_013359105 MODEL 8973894 protein-coding LOC102009095 carboxylesterase 1D-like NW_004955433 13464493 13497375 - 102009095 AGCD01031692;GBCQ01008179;XM_005388331;XM_005388332 XP_005388388;XP_005388389 MODEL 8883243 protein-coding Cemip cell migration inducing hyaluronidase 1 ENCODES a protein that exhibits clathrin heavy chain binding (ortholog); ER lumen protein retrieval receptor activity (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN hyaluronan catabolic process (ortholog); hyaluronan metabolic process (ortholog); positive regulation of cell migration (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); clathrin-coated vesicle membrane (ortholog); cytoplasm (ortholog) NW_004955416 11562047 11699925 + 102020800 AGCD01017190;GBCQ01044075;XM_005381436;XM_013512631;XM_013512632;XM_013512633 XP_005381493;XP_013368085;XP_013368086;XP_013368087 MODEL 9023388 protein-coding Cdc42ep3 CDC42 effector protein 3 ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog); lymphoma (ortholog); FOUND IN actin cytoskeleton (ortholog); plasma membrane (ortholog) NW_004955441 5437626 5461085 - 102006613 AGCD01036877;GBDK01130497;XM_005390875 XP_005390932 MODEL 39134262 misc_rna 7SK 7SK RNA 9019446 protein-coding Flad1 flavin adenine dinucleotide synthetase 1 ENCODES a protein that exhibits FAD diphosphatase activity (ortholog); FMN adenylyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN FAD biosynthetic process (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955545 1487929 1495808 + 102017387 AGCD01071856;AGCD01071857;GBDF01155147;XM_005411537;XM_005411538;XM_013508294 XP_005411594;XP_005411595;XP_013363748 MODEL 39131387 protein-coding WFDC8 WAP four-disulfide core domain 8 39131768 rrna 5S_rRNA 5S ribosomal RNA 8900029 ncrna LOC102011056 uncharacterized LOC102011056 NW_004955443 9637905 9651098 + 102011056 AGCD01038358;GBDF01014410;XR_262200;XR_262201 MODEL 8931583 protein-coding Acsm5 acyl-CoA synthetase medium chain family member 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955442 4047059 4075158 + 102014397 AGCD01037517;GBCQ01063612;XM_005391127;XM_005391128 XP_005391184;XP_005391185 MODEL 8962134 protein-coding LOC102018487 olfactory receptor 1030-like NW_004955414 23728226 23729164 + 102018487 AGCD01015518;XM_005380523 XP_005380580 MODEL 8747662 pseudo LOC102013840 putative vomeronasal receptor-like protein 4 NW_004955494 8292174 8293063 - 102013840 AGCD01061582 MODEL 9000119 pseudo LOC102009886 39S ribosomal protein L32, mitochondrial pseudogene NW_004955442 7886469 7887029 + 102009886 AGCD01037628 MODEL 9014299 protein-coding LOC102010296 uncharacterized LOC102010296 NW_004955516 3709709 3720497 + 102010296 AGCD01067503;AGCD01067504;GBCE01103721;XM_005409002 XP_005409059 MODEL 8775197 protein-coding Ccdc158 coiled-coil domain containing 158 ENCODES a protein that exhibits clathrin binding (ortholog); INVOLVED IN receptor-mediated endocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog) NW_004955433 1040193 1120585 - 102013962 AGCD01031344;AGCD01031345;AGCD01031346;AGCD01031347;GBCB01099837;XM_013516286 XP_013371740 MODEL 8705060 pseudo LOC102008726 peptidyl-prolyl cis-trans isomerase FKBP11 pseudogene NW_004955481 3772130 3773131 + 102008726 AGCD01056916 MODEL 8797517 protein-coding Ap3b2 adaptor related protein complex 3 subunit beta 2 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 48 (ortholog); genetic disease (ortholog); FOUND IN neuron projection (ortholog); presynapse (ortholog) NW_004955416 13927655 13956589 + 102006659 AGCD01017240;GBDF01019358;XM_005381476;XM_005381477 XP_005381533;XP_005381534 MODEL 8803018 protein-coding Arhgap23 Rho GTPase activating protein 23 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955451 13627283 13667987 + 102017835 AGCD01043493;AGCD01043494;AGCD01043495;AGCD01043496;GBBH01077113;GBCE01009788;XM_013519356 XP_013374810 MODEL 39133982 misc_rna 7SK 7SK RNA 8835247 protein-coding Ca4 carbonic anhydrase 4 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); response to steroid hormone (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); fundus dystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955451 1485939 1493249 + 102006970 AGCD01042971;AGCD01042972;GBDI01293079;XM_005393960 XP_005394017 MODEL 8855899 protein-coding Rell2 RELT like 2 ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); positive regulation of p38MAPK cascade (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); plasma membrane (ortholog) NW_004955415 12134642 12138071 - 102005796 AGCD01016185;GBDF01165826;XM_005380727;XM_013512220;XM_013512221 XP_005380784;XP_013367674;XP_013367675 MODEL 8744019 protein-coding LOC102006090 neutrophil cationic peptide 2-like NW_004955403 53736552 53738672 + 102006090 AGCD01003071;GBDF01020160;XM_005373838 XP_005373895 MODEL 8785792 protein-coding Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 INVOLVED IN apoptotic process (ortholog); cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955402 44005517 44010722 + 102015363 AGCD01001085;GBDJ01234034;XM_005373005;XM_005373006 XP_005373062;XP_005373063 MODEL 8848300 protein-coding Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN membrane protein proteolysis (ortholog); protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH Cognitive Dysfunction (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN endopeptidase Clp complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955495 3224968 3233482 - 102015539 AGCD01061839;AGCD01061840;AGCD01061841;GBDI01172235;XM_005405726 XP_005405783 MODEL 8883960 protein-coding LOC102013498 vomeronasal type-1 receptor 90-like NW_004955414 15078937 15087520 + 102013498 AGCD01015176;XM_005380444 XP_005380501 MODEL 8990785 protein-coding Adgrg6 adhesion G protein-coupled receptor G6 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); laminin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cartilage development (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955436 17804548 17931667 - 102009873 AGCD01033951;AGCD01033952;GBCE01008915;GBCE01008917;XM_005389253;XM_005389254;XM_013516670;XM_013516671;XM_013516672;XM_013516673;XM_013516674 XP_005389310;XP_005389311;XP_013372124;XP_013372125;XP_013372126;XP_013372127;XP_013372128 MODEL 8709544 protein-coding LOC102022557 serine protease 55 NW_004955403 52130187 52140797 + 102022557 AGCD01003002;AGCD01003003;GBDF01031608;XM_005373804 XP_005373861 MODEL 730469181 misc_rna SOX2OT_exon4 SOX2 overlapping transcript exon 4 8940048 ncrna LOC102004290 uncharacterized LOC102004290 NW_004955493 4019353 4020906 - 102004290 AGCD01061023;GBDF01277572;XR_264081 MODEL 8853203 protein-coding Rtn4rl2 reticulon 4 receptor like 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); corpus callosum development (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955511 2463006 2474045 + 102029773 AGCD01066405;AGCD01066406;AGCD01066407;AGCD01066408;GBDF01148153;XM_013506377 XP_013361831 MODEL 39134116 misc_rna 7SK 7SK RNA 8880582 protein-coding LOC102008337 olfactory receptor 1030 NW_004955511 1667797 1668753 - 102008337 AGCD01066377;XM_005407970 XP_005408027 MODEL 39131911 rrna 5S_rRNA 5S ribosomal RNA 8964151 pseudo LOC102011910 WD repeat-containing protein 25-like NW_004955437 2585766 2597361 - 102011910 AGCD01034277;AGCD01034278 MODEL 9021111 protein-coding Slc44a4 solute carrier family 44 member 4 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); thiamine pyrophosphate transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine biosynthetic process (ortholog); acetylcholine secretion (ortholog); choline transport (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 72 (ortholog); autosomal recessive proximal renal tubular acidosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955437 383523 396456 - 102003278 AGCD01034128;AGCD01034129;GBDF01148766;XM_005389391 XP_005389448 MODEL 8811856 trna trnF(gaa) tRNA-Phe MT 1 66 + 15822237 8764609 protein-coding Cemip2 cell migration inducing hyaluronidase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); hyalurononglucosaminidase activity (ortholog); INVOLVED IN hyaluronan catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chronic Hepatitis B (ortholog); FOUND IN plasma membrane (ortholog) NW_004955434 1400949 1477278 + 102021477 AGCD01032067;AGCD01032068;GBCQ01127880;XM_005388525;XM_005388527;XM_013516338;XM_013516339 XP_005388582;XP_005388584;XP_013371792;XP_013371793 MODEL 8757659 protein-coding Flcn folliculin ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell-cell junction assembly (ortholog); cellular response to amino acid starvation (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Angiofibroma (ortholog); Birt-Hogg-Dube syndrome (ortholog); breast cancer (ortholog); FOUND IN cell-cell contact zone (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955577 672774 694140 + 102019651 AGCD01075409;AGCD01075410;GBCE01099409;XM_005413976;XM_005413977;XM_005413978 XP_005414033;XP_005414034;XP_005414035 MODEL 8880213 protein-coding Cdc42ep4 CDC42 effector protein 4 INVOLVED IN cellular response to type II interferon (ortholog); positive regulation of pseudopodium assembly (ortholog); regulation of cell shape (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytoplasm (ortholog) NW_004955553 311725 335125 - 102030574 AGCD01072853;AGCD01072854;GBCB01087929;XM_005412217;XM_005412218;XM_005412219;XM_005412220 XP_005412274;XP_005412275;XP_005412276;XP_005412277 MODEL 9038917 pseudo LOC102007194 metal-response element-binding transcription factor 2-like NW_004955407 20859491 20861983 - 102007194 AGCD01007345 MODEL 8782395 protein-coding Ern1 endoplasmic reticulum to nucleus signaling 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); endonuclease activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN AIP1-IRE1 complex (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955478 7720664 7803662 + 102028189 AGCD01055988;AGCD01055989;AGCD01055990;AGCD01055991;GBBH01142310;GBDF01040833;XM_013503183 XP_013358637 MODEL 8742383 protein-coding Lrp1 LDL receptor related protein 1 ENCODES a protein that exhibits alpha-2 macroglobulin receptor activity (ortholog); apolipoprotein binding (ortholog); calcium ion binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta clearance by transcytosis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN apical part of cell (ortholog); axonal growth cone (ortholog); basolateral plasma membrane (ortholog) NW_004955458 4861431 4941939 + 102021525 AGCD01047443;AGCD01047444;AGCD01047445;GBCE01001876;XM_005397348 XP_005397405 MODEL 8929141 protein-coding Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 ENCODES a protein that exhibits ATPase activator activity (ortholog); DNA binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); chorio-allantoic fusion (ortholog); chorion development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955579 240058 298592 + 102030684 AGCD01075541;AGCD01075542;GBDI01021155;XM_005414100;XM_005414101 XP_005414157;XP_005414158 MODEL 8892010 protein-coding Ca5a carbonic anhydrase 5A ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH anemia (ortholog); CARBONIC ANHYDRASE VA DEFICIENCY, HYPERAMMONEMIA DUE TO (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955541 2141450 2159955 - 102003176 AGCD01071402;GBBH01033496;XM_005411015 XP_005411072 MODEL 8949886 pseudo LOC102004657 UBX domain-containing protein 2B pseudogene NW_004955402 184252 185227 + 102004657 AGCD01000011 MODEL 8991085 protein-coding Dab1 DAB adaptor protein 1 ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration (ortholog); cerebellum structural organization (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog); FOUND IN apical part of cell (ortholog); brush border (ortholog); cytoplasm (ortholog) NW_004955464 2325529 2721497 + 102019784 AGCD01049964;AGCD01049965;GBDI01207950;XM_013521740;XM_013521741;XM_013521743;XM_013521744;XM_013521745 XP_013377194;XP_013377195;XP_013377197;XP_013377198;XP_013377199 MODEL 9055009 pseudo LOC102011060 MICOS complex subunit MIC27 pseudogene NW_004955444 6968368 6969142 - 102011060 AGCD01038884 MODEL 8723900 ncrna LOC102003232 uncharacterized LOC102003232 NW_004955416 2924029 2929842 + 102003232 AGCD01016863;GBDF01042362;XR_260349;XR_260350;XR_260351 MODEL 8740452 pseudo LOC102013499 superoxide dismutase [Cu-Zn] pseudogene NW_004955472 2854745 2855177 + 102013499 AGCD01053492 MODEL 8826072 protein-coding Ilf2 interleukin enhancer binding factor 2 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955545 308560 316053 - 102018983 AGCD01071783;AGCD01071784;GBDK01416208;XM_005411437;XM_005411438 XP_005411494;XP_005411495 MODEL 8822420 pseudo LOC102007568 calcyclin-binding protein pseudogene NW_004955495 2910765 2911344 - 102007568 AGCD01061810 MODEL 8839753 ncrna LOC102008729 uncharacterized LOC102008729 NW_004955419 12989057 12990429 + 102008729 AGCD01019990;GBDF01083945;XR_001233562 MODEL 8836376 protein-coding Cfd complement factor D ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, alternative pathway (ortholog); Notch signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); arthus reaction (ortholog); asbestosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 6955612 6961317 - 102016395 AGCD01062104;AGCD01062105;GBDI01121981;XM_005406171 XP_005406228 MODEL 8822377 protein-coding B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 ENCODES a protein that exhibits lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity (ortholog); INVOLVED IN central nervous system development (ortholog) NW_004955420 24029867 24061801 - 102004824 AGCD01021270;GBDI01088265;XM_005383366;XM_005383367;XM_013513469;XR_001233722;XR_001233723 XP_005383423;XP_005383424;XP_013368923 MODEL 8793200 protein-coding Brf2 BRF2 general transcription factor IIIB subunit ENCODES a protein that exhibits RNA polymerase III type 3 promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); transcription factor TFIIIB complex (ortholog) NW_004955463 13549571 13553946 - 102013483 AGCD01049871;GBDJ01061574;XM_013521531 XP_013376985 MODEL 9045983 ncrna LOC102012286 uncharacterized LOC102012286 NW_004955408 21941027 22001034 + 102012286 AGCD01008567;GBBH01167569;XR_001232370;XR_259698 MODEL 8743066 protein-coding Ap3d1 adaptor related protein complex 3 subunit delta 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH Albinism (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); endosome membrane (ortholog); glutamatergic synapse (ortholog) NW_004955495 5972177 6012525 + 102018301 AGCD01062045;AGCD01062046;GBDF01051444;XM_005405920;XM_005405921 XP_005405977;XP_005405978 MODEL 39134263 misc_rna 7SK 7SK RNA 8757509 pseudo LOC102014222 pre-mRNA-splicing factor SLU7-like NW_004955410 4406190 4432857 + 102014222 AGCD01010666 MODEL 39131448 protein-coding WFDC9 WAP four-disulfide core domain 9 8906659 protein-coding Arhgap24 Rho GTPase activating protein 24 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of Rac protein signal transduction (ortholog); negative regulation of ruffle assembly (ortholog); wound healing, spreading of epidermal cells (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN focal adhesion (ortholog) NW_004955474 3786264 4224778 - 102023801 AGCD01054348;AGCD01054349;AGCD01054350;AGCD01054351;AGCD01054352;AGCD01054353;AGCD01054354;AGCD01054355;AGCD01054356;AGCD01054357;AGCD01054358;GBCB01089672;XM_005401366;XM_005401367;XM_005401368;XM_005401369;XM_005401371;XM_005401372;XM_005401373;XM_013502767 XP_005401423;XP_005401424;XP_005401425;XP_005401426;XP_005401428;XP_005401429;XP_005401430;XP_013358221 MODEL 10255180 protein-coding Proser2 proline and serine rich 2 NW_004955421 27809610 27823125 + 106148411 AGCD01022296;AGCD01022297;GBCB01022185;GBDJ01030727;XM_013513651 XP_013369105 MODEL 8817665 protein-coding Anapc1 anaphase promoting complex subunit 1 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) NW_004955470 2182163 2262804 + 102029282 AGCD01052673;GBDF01126892;XM_005400611;XM_005400612;XM_005400613;XM_005400614 XP_005400668;XP_005400669;XP_005400670;XP_005400671 MODEL 8954932 protein-coding Ajm1 apical junction component 1 homolog ASSOCIATED WITH COVID-19 (ortholog) NW_004955513 4924344 4930850 + 102024602 AGCD01066943;GBCB01015030;XM_005408557;XM_005408558 XP_005408614;XP_005408615 MODEL 8786448 pseudo LOC102013843 uncharacterized protein C14orf28 homolog pseudogene NW_004955423 27730673 27731556 - 102013843 AGCD01024139 MODEL 8948060 protein-coding LOC102009890 kallikrein-4-like NW_004955558 2014462 2080060 + 102009890 AGCD01073496;AGCD01073497;AGCD01073498;AGCD01073499;AGCD01073500;AGCD01073501;AGCD01073502;AGCD01073503;AGCD01073504;AGCD01073505;AGCD01073506;AGCD01073507;AGCD01073508;AGCD01073509;XM_013508851 XP_013364305 MODEL 8750112 protein-coding Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ENCODES a protein that exhibits ADP binding (ortholog); ankyrin binding (ortholog); ATP binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); intracellular potassium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955435 19537224 19563631 + 102029786 AGCD01033432;AGCD01033433;GBDJ01021062;XM_005389040 XP_005389097 MODEL 8850729 protein-coding LOC102010298 liver carboxylesterase 1 NW_004955433 13504228 13538598 - 102010298 AGCD01031693;AGCD01031694;AGCD01031695;GBBH01016309;XM_005388336;XM_013516222 XP_005388393;XP_013371676 MODEL 8899302 protein-coding Ccdc159 coiled-coil domain containing 159 INVOLVED IN gene expression (ortholog); single fertilization (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN sperm head-tail coupling apparatus (ortholog) NW_004955495 2263350 2270043 + 102019288 AGCD01061760;GBDI01196961;XM_005405650;XM_005405651;XM_005405652;XM_005405653;XM_005405654 XP_005405707;XP_005405708;XP_005405709;XP_005405710;XP_005405711 MODEL 8935489 protein-coding Abcg2 ATP binding cassette subfamily G member 2 (JR blood group) ENCODES a protein that exhibits ABC-type sulfate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN angiogenesis (ortholog); asymmetric cell division (ortholog); biotin transport (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; erlotinib pharmacodynamics pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955474 12365903 12408715 + 102025237 AGCD01054660;AGCD01054661;GBCC01000779;GBCQ01064509;XM_005401452 XP_005401509 MODEL 9061677 protein-coding Reln reelin ENCODES a protein that exhibits lipoprotein particle receptor binding (ortholog); receptor ligand activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN associative learning (ortholog); axon guidance (ortholog); brain development (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955410 8424439 8863966 - 102018268 AGCD01010746;AGCD01010747;AGCD01010748;AGCD01010749;AGCD01010750;AGCD01010751;AGCD01010752;AGCD01010753;GBCE01089394;XM_005377235;XM_005377236 XP_005377292;XP_005377293 MODEL 39134117 misc_rna 7SK 7SK RNA 9045940 protein-coding Ilf3 interleukin enhancer binding factor 3 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of translation (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955495 1814012 1844605 + 102010277 AGCD01061733;AGCD01061734;AGCD01061735;GBDF01047065;XM_005405615;XM_005405616;XM_005405618;XM_005405619;XM_005405621;XM_005405622;XM_005405623;XM_013505145;XM_013505146 XP_005405672;XP_005405673;XP_005405675;XP_005405676;XP_005405678;XP_005405679;XP_005405680;XP_013360599;XP_013360600 MODEL 8755833 protein-coding Slc44a5 solute carrier family 44 member 5 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955423 17260324 17615777 + 102026230 AGCD01023852;AGCD01023853;AGCD01023854;AGCD01023855;AGCD01023856;AGCD01023857;AGCD01023858;GBDF01088885;XM_005385229;XM_013514352;XM_013514353;XM_013514354 XP_005385286;XP_013369806;XP_013369807;XP_013369808 MODEL 8733305 protein-coding Sh3bp4 SH3 domain binding protein 4 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN amino acid import (ortholog); cellular response to amino acid stimulus (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); axonal neuropathy (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955453 1387954 1425268 - 102028930 AGCD01044612;GBDK01141681;XM_005395325;XM_005395328;XM_005395329 XP_005395382;XP_005395385;XP_005395386 MODEL 8919046 protein-coding LOC102018488 uncharacterized LOC102018488 NW_004955473 10382694 10390790 - 102018488 AGCD01054094;GBDF01014963;XM_005401278 XP_005401335 MODEL 9065380 protein-coding Cdc42se1 CDC42 small effector 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cell junction (ortholog) NW_004955588 423091 440248 - 102023861 AGCD01076109;AGCD01076110;GBCE01056319;XM_005414490;XM_013509906 XP_005414547;XP_013365360 MODEL 8980917 protein-coding Acss1 acyl-CoA synthetase short chain family member 1 ENCODES a protein that exhibits acetyl-CoA synthetase activity (ortholog); propionate-CoA ligase activity (ortholog); INVOLVED IN acetate biosynthetic process (ortholog); acetyl-CoA biosynthetic process (ortholog); propionate biosynthetic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; malonic aciduria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955415 31117542 31154654 - 102009378 AGCD01016669;GBDJ01083439;XM_005380983 XP_005381040 MODEL 8719709 protein-coding Clps colipase ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN positive regulation of catalytic activity (ortholog); post-embryonic development (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); thymoma (ortholog); type 2 diabetes mellitus (ortholog) NW_004955437 3624676 3626529 - 102003063 AGCD01034327;XM_005389567 XP_005389624 MODEL 8996972 protein-coding Lrp10 LDL receptor related protein 10 ENCODES a protein that exhibits low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN inner ear development (ortholog); lipid metabolic process (ortholog); lipid transport (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955409 37413471 37419485 - 102003098 AGCD01010512;AGCD01010513;GBDF01005600;GBDJ01017379;XM_005377114 XP_005377171 MODEL 8753410 pseudo LOC102009099 UDP-glucuronosyltransferase 1-1 pseudogene NW_004955433 9487229 9488826 + 102009099 AGCD01031613 MODEL 8911608 protein-coding LOC102022559 ATP-binding cassette sub-family G member 2-like NW_004955405 9444970 9614939 + 102022559 AGCD01004773;AGCD01004774;AGCD01004775;AGCD01004776;AGCD01004777;AGCD01004778;AGCD01004779;AGCD01004780;AGCD01004781;AGCD01004782;AGCD01004783;AGCD01004784;GBCQ01014385;XM_005374296;XM_005374297 XP_005374353;XP_005374354 MODEL 8726228 ncrna LOC102013501 uncharacterized LOC102013501 NW_004955473 5281173 5291335 + 102013501 AGCD01053974;GBDI01312184;XR_001237117;XR_263581 MODEL 9024376 protein-coding Adgrg7 adhesion G protein-coupled receptor G7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955427 2234640 2305510 + 102023379 AGCD01026894;AGCD01026895;GBCQ01162719;XM_005386303;XM_005386304 XP_005386360;XP_005386361 MODEL 9026371 protein-coding LOC102003238 C-C motif chemokine 2-like NW_004955481 8924855 8926701 - 102003238 AGCD01057090;GBDK01146257;XM_005402836 XP_005402893 MODEL 8960211 protein-coding Sox3 SRY-box transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); face development (ortholog); forebrain development (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); hypopituitarism (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, WITH PANHYPOPITUITARISM (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955489 4817753 4819858 + 102021981 AGCD01059916;AGCD01059917;GBDJ01389993;XM_013504464 XP_013359918 MODEL 39133983 misc_rna 7SK 7SK RNA 39131912 rrna 5S_rRNA 5S ribosomal RNA 39131769 rrna 5S_rRNA 5S ribosomal RNA 8924925 pseudo LOC102008732 cytochrome b-c1 complex subunit 7-like NW_004955484 9493540 9493755 - 102008732 AGCD01058418 MODEL 8979103 ncrna LOC102006092 uncharacterized LOC102006092 NW_004955405 12203636 12228952 - 102006092 AGCD01004849;GBDK01148852;XR_001235355;XR_001235356;XR_001235357;XR_001235358 MODEL 9039399 protein-coding Ap3m1 adaptor related protein complex 3 subunit mu 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN postsynaptic recycling endosome (ortholog) NW_004955437 17786419 17810678 + 102004202 AGCD01034758;AGCD01034759;AGCD01034760;AGCD01034761;GBDF01261815;XM_005389931 XP_005389988 MODEL 39134118 misc_rna 7SK 7SK RNA 8876351 ncrna LOC102007199 uncharacterized LOC102007199 NW_004955409 10077543 10110578 - 102007199 AGCD01009457;AGCD01009458;GBDF01260753;XR_001232639;XR_001232640;XR_259766 MODEL 8855044 trna trnG(tcc) tRNA-Gly MT 9396 9464 + 15822209 8827910 ncrna LOC102005020 uncharacterized LOC102005020 NW_004955467 11742739 11757242 - 102005020 AGCD01051616;AGCD01051617;GBDF01289227;XR_263362 MODEL 8855012 protein-coding Bri3 brain protein I3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955460 14165874 14174464 + 102029053 AGCD01048742;GBDF01045177;GBDI01000286;XM_013521167 XP_013376621 MODEL 8762173 protein-coding Fli1 Fli-1 proto-oncogene, ETS transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); megakaryocyte development (ortholog); ASSOCIATED WITH blood coagulation disease (ortholog); Breast Cancer, Familial (ortholog); Epistaxis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 29653621 29773412 + 102012178 AGCD01013284;AGCD01013285;AGCD01013286;GBDK01013563;XM_005378532;XM_013511152;XM_013511153 XP_005378589;XP_013366606;XP_013366607 MODEL 8827319 protein-coding Dnajb7 DnaJ heat shock protein family (Hsp40) member B7 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog) NW_004955413 26510844 26512855 - 102014229 AGCD01014446;GBDF01143714;XM_005379335 XP_005379392 MODEL 8908656 protein-coding Ajuba ajuba LIM protein ENCODES a protein that exhibits actin filament binding (ortholog); alpha-catenin binding (ortholog); chromatin binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); focal adhesion assembly (ortholog); glycerophospholipid biosynthetic process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955409 37318597 37329068 + 102026082 AGCD01010507;GBDI01220023;XM_005377096 XP_005377153 MODEL 8737604 protein-coding Ca5b carbonic anhydrase 5B ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN response to bacterium (ortholog); FOUND IN mitochondrion (ortholog) NW_004955519 2415722 2455052 - 102012120 AGCD01067929;AGCD01067930;AGCD01067931;GBCE01169072;XM_005409159 XP_005409216 MODEL 8836173 protein-coding Dab2 DAB adaptor protein 2 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); cargo receptor activity (ortholog); clathrin binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) NW_004955426 23852752 23883030 - 102010924 AGCD01026658;AGCD01026659;GBBH01006783;GBCE01028917;XM_013514991 XP_013370445 MODEL 8875344 protein-coding LOC102004294 cytochrome P450 4F22 ENCODES a protein that exhibits monooxygenase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); atopic dermatitis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955495 7730881 7763684 - 102004294 AGCD01062162;AGCD01062163;GBDF01280840;XM_005406064;XM_013505318 XP_005406121;XP_013360772 MODEL 8997714 protein-coding Rtp1 receptor transporter protein 1 ENCODES a protein that exhibits olfactory receptor binding (ortholog); INVOLVED IN protein insertion into membrane (ortholog); FOUND IN cell surface (ortholog) NW_004955420 20622226 20625073 - 102026751 AGCD01021095;AGCD01021096;GBBH01073077;XM_005383256 XP_005383313 MODEL 8945647 protein-coding LOC102008338 olfactory receptor 5W2-like NW_004955511 810336 811271 + 102008338 AGCD01066344;XM_005408211 XP_005408268 MODEL 8821884 pseudo LOC102011911 citrate synthase, mitochondrial-like NW_004955438 13790119 13791348 - 102011911 AGCD01035308 MODEL 8894917 protein-coding Cfdp1 chromatin remodeling protein CFDP1 ENCODES a protein that exhibits nucleosome binding (ortholog); satellite DNA binding (ortholog); INVOLVED IN cell adhesion (ortholog); negative regulation of fibroblast apoptotic process (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog); pericentric heterochromatin (ortholog) NW_004955484 2085372 2203177 + 102021558 AGCD01058087;AGCD01058088;AGCD01058089;AGCD01058090;AGCD01058091;AGCD01058092;AGCD01058093;GBDF01047807;XM_005403448;XM_005403449 XP_005403505;XP_005403506 MODEL 8869850 protein-coding Cenatac centrosomal AT-AC splicing factor INVOLVED IN chromosome separation (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of centrosome duplication (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); U12-type precatalytic spliceosome (ortholog) NW_004955412 20113844 20126783 + 102021540 AGCD01012993;AGCD01012994;GBDF01223007;XM_005378286 XP_005378343 MODEL 8794119 protein-coding Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amygdala development (ortholog); ATP metabolic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); alternating esotropia (ortholog); alternating hemiplegia of childhood (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955468 11898786 11924341 + 102014344 AGCD01052139;GBDF01156916;XM_005400194 XP_005400251 MODEL 8749708 protein-coding B3gnt6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog) NW_004955414 14728067 14729896 - 102010895 AGCD01015156;XM_013512055 XP_013367509 MODEL 8981777 protein-coding LOC102014224 serotriflin-like NW_004955411 8272227 8279483 + 102014224 AGCD01011722;AGCD01011723;AGCD01011724;GBBH01225617;XM_005377929 XP_005377986 MODEL 9005928 protein-coding Abcg4 ATP binding cassette subfamily G member 4 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to high density lipoprotein particle stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); endosome (ortholog) NW_004955412 20256467 20270172 + 102028393 AGCD01013001;GBDI01112120;XM_005378311;XM_013511081 XP_005378368;XP_013366535 MODEL 39134264 misc_rna 7SK 7SK RNA 8987086 protein-coding Relt RELT TNF receptor INVOLVED IN amelogenesis (ortholog); apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 3C (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955414 18074487 18104972 - 102016465 AGCD01015268;AGCD01015269;AGCD01015270;GBDK01307406;XM_005379952;XM_005379953;XM_005379954;XM_013511811 XP_005380009;XP_005380010;XP_005380011;XP_013367265 MODEL 8813947 protein-coding Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955442 16573094 16577650 - 102024168 AGCD01037901;GBDK01343854;XM_005391633 XP_005391690 MODEL 8794988 protein-coding Proser3 proline and serine rich 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955468 2786736 2796851 - 102023137 AGCD01051838;GBDI01293635;XM_013522290 XP_013377744 MODEL 39134119 misc_rna 7SK 7SK RNA 8999041 protein-coding Slc45a1 solute carrier family 45 member 1 ENCODES a protein that exhibits D-glucose:proton symporter activity (ortholog); galactose:proton symporter activity (ortholog); hexose transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); galactose transmembrane transport (ortholog); transmembrane transport from lysosomal lumen to cytosol (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); epilepsy (ortholog); esophageal cancer (ortholog); FOUND IN lysosomal membrane (ortholog); membrane (ortholog) NW_004955486 4701889 4732008 - 102023605 AGCD01059063;AGCD01059064;AGCD01059065;AGCD01059066;GBDF01222620;GBDJ01042970;XM_013504132 XP_013359586 MODEL 8770267 ncrna LOC102006093 uncharacterized LOC102006093 NW_004955452 11238563 11263569 + 102006093 AGCD01044333;GBBH01084072;XR_001236059;XR_001236060;XR_001236061;XR_001236062;XR_262679 MODEL 9040438 protein-coding LOC102013845 regenerating islet-derived protein 3-gamma-like NW_004955424 7354388 7357516 + 102013845 AGCD01024435;GBDF01061193;XM_005385459 XP_005385516 MODEL 8955860 protein-coding Acss2 acyl-CoA synthetase short chain family member 2 ENCODES a protein that exhibits acetyl-CoA synthetase activity (ortholog); chromatin binding (ortholog); propionate-CoA ligase activity (ortholog); INVOLVED IN acetate biosynthetic process (ortholog); acetyl-CoA biosynthetic process (ortholog); ethanol catabolic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; Leigh disease pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955422 26450899 26500336 - 102017786 AGCD01023288;GBBH01140448;XM_005384812;XM_005384813;XM_013514052 XP_005384869;XP_005384870;XP_013369506 MODEL 9002245 ncrna LOC102007578 uncharacterized LOC102007578 NW_004955430 1701824 1706200 - 102007578 AGCD01029131;AGCD01029132;GBDF01156088;XR_001234556 MODEL 8707874 ncrna LOC102010301 uncharacterized LOC102010301 NW_004955524 791217 792333 + 102010301 AGCD01068708;GBDF01013580;XR_001231946 MODEL 8875818 protein-coding Cdc42se2 CDC42 small effector 2 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN regulation of signal transduction (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955408 2780126 2881800 + 102020208 AGCD01008034;AGCD01008035;AGCD01008036;AGCD01008037;AGCD01008038;AGCD01008039;GBBH01065425;XM_005376069;XM_005376071 XP_005376126;XP_005376128 MODEL 8793170 ncrna LOC102012289 uncharacterized LOC102012289 NW_004955410 7716614 7721059 + 102012289 AGCD01010722;GBDK01172238;XR_259826 MODEL 8893791 protein-coding LOC102013509 uncharacterized LOC102013509 NW_004955485 6368092 6370491 + 102013509 AGCD01058616;XM_005403920 XP_005403977 MODEL 9000648 pseudo LOC102003239 coiled-coil domain-containing protein 90B, mitochondrial pseudogene NW_004955481 173004 173995 - 102003239 AGCD01056783 MODEL 8993017 protein-coding Pmch pro-melanin concentrating hormone ENCODES a protein that exhibits melanin-concentrating hormone activity (ortholog); type 1 melanin-concentrating hormone receptor binding (ortholog); INVOLVED IN drinking behavior (ortholog); feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Insulin Resistance (ortholog); obesity (ortholog); sleeping sickness (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog) NW_004955405 37357468 37360695 - 102029697 AGCD01005452;GBBH01147925;XM_005374562 XP_005374619 MODEL 9000038 protein-coding LOC102004660 spermatogenesis-associated protein 31E1-like NW_004955637 27177 28652 - 102004660 AGCD01077641;GBDF01002545;GBDF01006017;XM_013510170 XP_013365624 MODEL 8750752 protein-coding Rtp2 receptor transporter protein 2 ENCODES a protein that exhibits olfactory receptor binding (ortholog); INVOLVED IN protein insertion into membrane (ortholog); FOUND IN cell surface (ortholog) NW_004955420 20043153 20047082 + 102024803 AGCD01021071;GBBH01107471;XM_005383249 XP_005383306 MODEL 9025237 protein-coding LOC102011061 olfactory receptor 7G2-like NW_004955563 307152 309101 - 102011061 AGCD01074060;XM_013509132;XM_013509133 XP_013364586;XP_013364587 MODEL 9022957 protein-coding Arhgap25 Rho GTPase activating protein 25 INVOLVED IN actin filament organization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); phagocytosis, engulfment (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN phagocytic cup (ortholog) NW_004955424 16166285 16241481 - 102019292 AGCD01024738;GBDK01142007;XM_005385657;XM_005385658;XM_005385660;XM_013514712 XP_005385714;XP_005385715;XP_005385717;XP_013370166 MODEL 8759121 protein-coding Sh3bp5 SH3 domain binding protein 5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); ASSOCIATED WITH lung cancer (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); mitochondrion (ortholog); nuclear body (ortholog) NW_004955430 2251544 2266166 + 102014074 AGCD01029161;AGCD01029162;GBCB01005483;XM_005387310 XP_005387367 MODEL 8970204 ncrna LOC102009891 uncharacterized LOC102009891 NW_004955444 753602 758219 - 102009891 AGCD01038683;GBDF01111656;XR_001235508 MODEL 8713747 protein-coding Clptm1 CLPTM1 regulator of GABA type A receptor forward trafficking ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN inhibitory chemical synaptic transmission (ortholog); memory (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); GABA-ergic synapse (ortholog) NW_004955555 2029591 2056321 + 102029671 AGCD01073126;GBDF01005692;XM_005412483 XP_005412540 MODEL 8996389 ncrna LOC102009100 uncharacterized LOC102009100 NW_004955523 130276 134656 - 102009100 AGCD01068435;XR_001231912 MODEL 9032650 protein-coding LOC102022569 neural Wiskott-Aldrich syndrome protein-like NW_004955457 15824734 15826663 + 102022569 AGCD01047099;GBCQ01093605;XM_005397108 XP_005397165 MODEL 8947233 protein-coding Flii FLII actin remodeling protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN sarcomere organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN brush border (ortholog); podosome (ortholog) NW_004955478 11061728 11075370 + 102021340 AGCD01056157;AGCD01056158;GBBH01061469;GBDI01005007;XM_013503179 XP_013358633 MODEL 8902247 protein-coding Lrp11 LDL receptor related protein 11 ENCODES a protein that exhibits phosphoprotein binding (ortholog); INVOLVED IN multicellular organismal response to stress (ortholog); response to cold (ortholog); response to heat (ortholog) NW_004955439 11426283 11475260 + 102006958 AGCD01035908;AGCD01035909;AGCD01035910;GBCE01007076;GBCQ01097167;XM_013517316 XP_013372770 MODEL 8933062 pseudo LOC102004295 coiled-coil domain-containing protein 94 pseudogene NW_004955423 23602366 23603386 + 102004295 AGCD01024009 MODEL 8962958 protein-coding Ak1 adenylate kinase 1 ENCODES a protein that exhibits AMP kinase activity (ortholog); dAMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); cerebellum development (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; ASSOCIATED WITH congenital nonspherocytic hemolytic anemia (ortholog); congenital nonspherocytic hemolytic anemia 3 (ortholog); hemolytic anemia (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955419 799415 807138 + 102024677 AGCD01019612;GBDF01157929;XM_005382404;XM_005382405 XP_005382461;XP_005382462 MODEL 9021239 protein-coding Dab2ip DAB2 interacting protein ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); death receptor binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell motility involved in cerebral cortex radial glia guided migration (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); atherosclerosis (ortholog); carotid artery occlusion (ortholog); FOUND IN AIP1-IRE1 complex (ortholog); axon (ortholog); cerebellar mossy fiber (ortholog) NW_004955419 6229437 6416619 - 102011992 AGCD01019852;AGCD01019853;AGCD01019854;AGCD01019855;AGCD01019856;AGCD01019857;AGCD01019858;GBDF01128674;XM_005382543;XM_005382544;XM_005382545;XM_005382546;XM_005382549;XM_005382553;XM_005382554;XM_005382555;XM_013513228 XP_005382600;XP_005382601;XP_005382602;XP_005382603;XP_005382606;XP_005382610;XP_005382611;XP_005382612;XP_013368682 MODEL 39133984 misc_rna 7SK 7SK RNA 8758286 protein-coding Ern2 endoplasmic reticulum to nucleus signaling 2 ENCODES a protein that exhibits ATP binding (ortholog); endonuclease activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955493 2217187 2233920 - 102014683 AGCD01060935;GBBH01165480;GBBH01165568;XM_013504864 XP_013360318 MODEL 8957872 protein-coding LOC102007579 olfactory receptor 5B3-like NW_004955511 3369163 3370107 - 102007579 AGCD01066459;XM_005408264 XP_005408321 MODEL 8802878 protein-coding LOC102008750 rho GTPase-activating protein 21-like NW_004955503 2090544 2097475 + 102008750 AGCD01064595;AGCD01064596;XM_013505847 XP_013361301 MODEL 8810119 protein-coding Acss3 acyl-CoA synthetase short chain family member 3 ENCODES a protein that exhibits acetyl-CoA synthetase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); propionate-CoA ligase activity (ortholog); PARTICIPATES IN 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; fatty acid beta degradation pathway; malonic aciduria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955405 19677191 19836086 + 102023866 AGCD01005043;AGCD01005044;AGCD01005045;AGCD01005046;AGCD01005047;GBCQ01000817;XM_005374371;XM_005374372;XM_013517967 XP_005374428;XP_005374429;XP_013373421 MODEL 9021784 protein-coding Anapc10 anaphase promoting complex subunit 10 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Mayer-Rokitansky-Kuster-Hauser syndrome type 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytoplasm (ortholog) NW_004955428 945238 1029818 - 102030448 AGCD01027594;AGCD01027595;AGCD01027596;AGCD01027597;AGCD01027598;GBDJ01028582;XM_005386637;XM_005386638;XM_005386639;XM_013515276 XP_005386694;XP_005386695;XP_005386696;XP_013370730 MODEL 8901313 protein-coding Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); D1 dopamine receptor binding (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); blood circulation (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Abdominal Pain (ortholog); alternating hemiplegia of childhood (ortholog); Alternating Hemiplegia of Childhood 2 (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); calyx of Held (ortholog) NW_004955555 869508 892510 + 102005309 AGCD01073051;GBBH01169114;XM_005412401 XP_005412458 MODEL 8796021 protein-coding LOC102004662 interleukin-3 receptor subunit alpha-like NW_004956002 9149 9686 - 102004662 AGCD01078846;GBCE01069509;GBDK01099765;XM_005415160 XP_005415217 MODEL 8915776 protein-coding Cfi complement factor I INVOLVED IN cellular response to interleukin-6 (ortholog); complement activation (ortholog); gene expression (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); age related macular degeneration 13 (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN extracellular region (ortholog); serine-type endopeptidase complex (ortholog) NW_004955496 492217 553398 + 102025262 AGCD01062228;AGCD01062229;AGCD01062230;AGCD01062231;AGCD01062232;AGCD01062233;AGCD01062234;AGCD01062235;GBCE01089340;XM_013505440;XM_013505441 XP_013360894;XP_013360895 MODEL 9021599 protein-coding Bri3bp BRI3 binding protein ASSOCIATED WITH colon adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955482 4710937 4716534 - 102026528 AGCD01057306;GBCQ01176014;GBDF01123268;XM_013503743 XP_013359197 MODEL 8999270 protein-coding Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955451 10976748 10982482 - 102029352 AGCD01043338;GBCB01111308;XM_005394122 XP_005394179 MODEL 8800139 protein-coding Ca6 carbonic anhydrase 6 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955486 4234293 4249026 - 102025128 AGCD01059057;GBBH01198071;XM_005404045 XP_005404102 MODEL 8820002 protein-coding Slc45a2 solute carrier family 45 member 2 ENCODES a protein that exhibits D-glucose:proton symporter activity (ortholog); sucrose:proton symporter activity (ortholog); INVOLVED IN developmental pigmentation (ortholog); lysosomal lumen pH elevation (ortholog); melanin biosynthetic process from tyrosine (ortholog); ASSOCIATED WITH Albinism (ortholog); arthrogryposis multiplex congenita-4 (ortholog); basal cell carcinoma (ortholog); FOUND IN melanosome membrane (ortholog) NW_004955426 19498942 19530628 - 102027881 AGCD01026547;GBDF01043012;XM_005386166;XM_005386167;XM_013514938;XM_013514939 XP_005386223;XP_005386224;XP_013370392;XP_013370393 MODEL 39131913 rrna 5S_rRNA 5S ribosomal RNA 8738928 protein-coding Adgrl1 adhesion G protein-coupled receptor L1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); G protein-coupled receptor activity (ortholog); latrotoxin receptor activity (ortholog); INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); DEVELOPMENTAL DELAY, BEHAVIORAL ABNORMALITIES, AND NEUROPSYCHIATRIC DISORDERS (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) NW_004955415 32849066 32883628 - 102011653 AGCD01016737;AGCD01016738;GBDK01083473;XM_005381088;XM_005381089;XM_013512288 XP_005381145;XP_005381146;XP_013367742 MODEL 8774091 protein-coding Sox30 SRY-box transcription factor 30 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of Wnt signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Liver Metastasis (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromocenter (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 11790145 11830426 - 102016785 AGCD01008318;AGCD01008319;GBDF01000048;XM_005376239;XM_013508812 XP_005376296;XP_013364266 MODEL 8836314 protein-coding LOC102013512 olfactory receptor 4C12-like NW_004955422 189260 205015 - 102013512 AGCD01022401;GBDF01234708;XM_005383939 XP_005383996 MODEL 8878597 pseudo LOC102009101 DNA-directed RNA polymerases I, II, and III subunit RPABC1 pseudogene NW_004955434 8689984 8692539 - 102009101 AGCD01032262 MODEL 8743746 ncrna LOC102018490 uncharacterized LOC102018490 NW_004955415 16685821 16705592 + 102018490 AGCD01016391;AGCD01016392;AGCD01016393;GBDF01076606;XR_260300 MODEL 8924944 protein-coding Cend1 cell cycle exit and neuronal differentiation 1 INVOLVED IN adult walking behavior (ortholog); cerebellar granular layer maturation (ortholog); cerebellar Purkinje cell differentiation (ortholog); FOUND IN mitochondrion (ortholog); vesicle (ortholog) NW_004955476 11339586 11341996 + 102011200 AGCD01055452;GBDI01168023;XM_005401817 XP_005401874 MODEL 8950525 protein-coding Abcg5 ATP binding cassette subfamily G member 5 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); negative regulation of intestinal cholesterol absorption (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); autosomal dominant tubulointerstitial kidney disease 5 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); ATP-binding cassette (ABC) transporter complex (ortholog) NW_004955441 10964588 10987771 - 102028684 AGCD01037098;GBBH01022720;XM_005390938 XP_005390995 MODEL 8824899 protein-coding Cdc45 cell division cycle 45 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); androgen insensitivity syndrome (ortholog); Androgen Insensitivity Syndrome due to Coactivator Deficiency (ortholog); FOUND IN ciliary basal body (ortholog); CMG complex (ortholog); cytosol (ortholog) NW_004955442 18513398 18548317 - 102017513 AGCD01038009;AGCD01038010;GBDF01252151;GBDF01252157;XM_013517954 XP_013373408 MODEL 39134265 misc_rna 7SK 7SK RNA 8784605 protein-coding Rem1 RRAD and GEM like GTPase 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); regulation of skeletal muscle contraction by calcium ion signaling (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN I band (ortholog); T-tubule (ortholog) NW_004955422 29434477 29443172 - 102021886 AGCD01023394;GBDK01342980;XM_005384913 XP_005384970 MODEL 8798371 protein-coding Ap3m2 adaptor related protein complex 3 subunit mu 2 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synaptic vesicle (ortholog) NW_004955536 767470 900268 - 102010629 AGCD01070739;AGCD01070740;AGCD01070741;AGCD01070742;AGCD01070743;AGCD01070744;GBCE01183162;XM_005410517;XM_005410518;XM_005410519;XM_005410520 XP_005410574;XP_005410575;XP_005410576;XP_005410577 MODEL 9009210 protein-coding Ccdc160 coiled-coil domain containing 160 ASSOCIATED WITH genetic disease (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955473 725822 742698 - 102025113 AGCD01053853;GBBH01204252;XM_005401202;XM_005401203 XP_005401259;XP_005401260 MODEL 8852135 protein-coding Dnajb8 DnaJ heat shock protein family (Hsp40) member B8 ENCODES a protein that exhibits protein folding chaperone (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of inclusion body assembly (ortholog); protein folding (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955429 15349346 15350343 + 102025384 AGCD01028804;GBDF01011338;XM_005387042 XP_005387099 MODEL 8991588 protein-coding Prox1 prospero homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA binding domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acinar cell differentiation (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); esophageal cancer (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955406 3715140 3770019 - 102012922 AGCD01005674;GBCQ01174906;XM_005374720;XM_005374721;XM_005374722;XM_005374723;XM_013519987 XP_005374777;XP_005374778;XP_005374779;XP_005374780;XP_013375441 MODEL 39134120 misc_rna 7SK 7SK RNA 8738626 protein-coding Arhgap26 Rho GTPase activating protein 26 ENCODES a protein that exhibits phospholipid binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome membrane (ortholog) NW_004955415 10635410 11066551 - 102023466 AGCD01016137;AGCD01016138;AGCD01016139;AGCD01016140;AGCD01016141;AGCD01016142;AGCD01016143;AGCD01016144;AGCD01016145;AGCD01016146;GBBH01219201;GBDF01305074;XM_013512302 XP_013367756 MODEL 8840791 pseudo LOC102013847 T-complex protein 1 subunit zeta pseudogene NW_004955497 4429226 4430102 - 102013847 AGCD01062575 MODEL 8820311 ncrna LOC102008342 uncharacterized LOC102008342 NW_004955432 20887908 20912192 - 102008342 AGCD01031210;GBDF01207508;XR_261537 MODEL 8784960 protein-coding LOC102006094 intestinal-type alkaline phosphatase-like NW_004955453 3530091 3533832 + 102006094 AGCD01044662;AGCD01044663;XM_005395706 XP_005395763 MODEL 39131770 rrna 5S_rRNA 5S ribosomal RNA 9058628 pseudo LOC102011913 60S ribosomal protein L35 pseudogene NW_004955545 891588 891958 - 102011913 AGCD01071824 MODEL 8712526 protein-coding Clptm1l CLPTM1 like ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955504 677824 695660 - 102007920 AGCD01064826;GBBH01064845;XM_005407055;XM_005407056 XP_005407112;XP_005407113 MODEL 8801248 pseudo LOC102010302 glutathione S-transferase Mu 1-like NW_004955435 13225086 13240501 + 102010302 AGCD01033197;AGCD01033198;AGCD01033199 MODEL 8802976 ncrna LOC102012292 uncharacterized LOC102012292 NW_004955463 1605016 1606453 - 102012292 AGCD01049525;GBDJ01265798;XR_001236656 MODEL 8757341 protein-coding B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN keratan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955453 4178544 4180738 - 102007404 AGCD01044682;GBBH01150502;GBDJ01011170;XM_013519878 XP_013375332 MODEL 8874124 protein-coding Ilk integrin linked kinase ENCODES a protein that exhibits ATP binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH cardiomyopathy (ortholog); Cocaine-Related Disorders (ortholog); Colonic Polyps (ortholog); FOUND IN axon (ortholog); cell-cell junction (ortholog); centrosome (ortholog) NW_004955414 22316243 22322979 + 102027399 AGCD01015452;GBDF01047463;XM_005380164 XP_005380221 MODEL 8860859 ncrna LOC102014225 uncharacterized LOC102014225 NW_004955465 9702260 9741251 - 102014225 AGCD01050495;GBDK01058628;XR_001236719;XR_263262 MODEL 8983600 trna trnH(gtg) tRNA-His MT 11549 11617 + 15822212 8784127 protein-coding LOC102005024 mucosal pentraxin-like NW_004955468 11064309 11067510 + 102005024 AGCD01052113;XM_005400166 XP_005400223 MODEL 10092336 protein-coding Lrp12 LDL receptor related protein 12 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); integrin activation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 28 (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955417 28248620 28299845 - 106148202 AGCD01018576;AGCD01018577;AGCD01018578;GBBH01207935;GBDK01395295;XM_013512743 XP_013368197 MODEL 8855260 pseudo LOC102007580 protein kinase C iota type pseudogene NW_004955430 14241459 14243053 - 102007580 AGCD01029564 MODEL 8723060 protein-coding Rtp3 receptor transporter protein 3 INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955420 25545752 25550044 - 102025364 AGCD01021365;GBDK01129519;XM_005383440;XM_005383441;XM_005383442;XM_013513589;XM_013513590 XP_005383497;XP_005383498;XP_005383499;XP_013369043;XP_013369044 MODEL 9025217 protein-coding Ero1a endoplasmic reticulum oxidoreductase 1 alpha ENCODES a protein that exhibits flavin-dependent sulfhydryl oxidase activity (ortholog); oxidoreductase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell redox homeostasis (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Hypoxia-Ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955409 10495892 10533383 + 102009917 AGCD01009474;AGCD01009475;GBCE01145796;XM_005376780 XP_005376837 MODEL 9010348 ncrna LOC102008756 uncharacterized LOC102008756 NW_004955429 17376692 17378662 + 102008756 AGCD01028854;GBDF01303361;XR_001234496 MODEL 9054702 protein-coding Abcg8 ATP binding cassette subfamily G member 8 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); negative regulation of intestinal cholesterol absorption (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); ATP-binding cassette (ABC) transporter complex (ortholog); plasma membrane (ortholog) NW_004955441 10982307 11004789 + 102027905 AGCD01037098;GBDF01226499;XM_005390935;XM_005390936 XP_005390992;XP_005390993 MODEL 8883171 protein-coding Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); cardiac muscle contraction (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955462 8072519 8095311 - 102016245 AGCD01049314;AGCD01049315;GBBH01031781;GBDI01007069;XM_005398203 XP_005398260 MODEL 8812332 protein-coding Ap3s1 adaptor related protein complex 3 subunit sigma 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN AP-3 adaptor complex (ortholog); membrane (ortholog); synaptic vesicle (ortholog) NW_004955408 35621062 35680620 + 102025088 AGCD01008957;AGCD01008958;AGCD01008959;AGCD01008960;GBDF01005589;XM_005376529;XM_005376530 XP_005376586;XP_005376587 MODEL 8791428 protein-coding LOC102022571 low affinity immunoglobulin gamma Fc region receptor III-like NW_004955462 14728809 14740340 - 102022571 AGCD01049456;GBBH01117101;XM_005398310;XM_013521433;XM_013521434 XP_005398367;XP_013376887;XP_013376888 MODEL 8895307 pseudo LOC102007200 actin, cytoplasmic 2-like NW_004955409 20791291 20792243 + 102007200 AGCD01009930 MODEL 8804657 protein-coding Arhgap27 Rho GTPase activating protein 27 ENCODES a protein that exhibits actin filament binding (ortholog); GTPase activator activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN protein heterooligomerization (ortholog); receptor-mediated endocytosis (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN endosome (ortholog) NW_004955451 18012050 18040013 - 102026708 AGCD01043788;AGCD01043789;AGCD01043790;GBBH01031724;GBCE01077884;XM_013519297 XP_013374751 MODEL 8771794 protein-coding Slc45a3 solute carrier family 45 member 3 ENCODES a protein that exhibits sucrose:proton symporter activity (ortholog); INVOLVED IN positive regulation of fatty acid biosynthetic process (ortholog); positive regulation of glucose metabolic process (ortholog); regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955406 41362077 41381981 - 102010669 AGCD01006678;AGCD01006679;GBDK01319488;XM_005375364;XM_005375368;XM_013522930;XM_013522934;XM_013522936;XM_013522940;XM_013522943 XP_005375421;XP_005375425;XP_013378384;XP_013378388;XP_013378390;XP_013378394;XP_013378397 MODEL 8796542 protein-coding Ca7 carbonic anhydrase 7 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN intracellular pH reduction (ortholog); positive regulation of synaptic transmission, GABAergic (ortholog); regulation of chloride transport (ortholog); ASSOCIATED WITH melanoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytosol (ortholog) NW_004955433 23365832 23374517 + 102023732 AGCD01031959;GBDF01241916;XM_005388474;XM_013516269;XM_013516270 XP_005388531;XP_013371723;XP_013371724 MODEL 8985440 pseudo LOC102011914 N-alpha-acetyltransferase 50 pseudogene NW_004955441 5500863 5501537 + 102011914 AGCD01036878 MODEL 8777303 protein-coding Dach1 dachshund family transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell population proliferation (ortholog); development of primary female sexual characteristics (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955404 34739780 35118037 + 102026936 AGCD01004105;AGCD01004106;AGCD01004107;AGCD01004108;AGCD01004109;AGCD01004110;AGCD01004111;AGCD01004112;AGCD01004113;AGCD01004114;AGCD01004115;AGCD01004116;GBDK01421830;XM_013516960 XP_013372414 MODEL 10322056 protein-coding Sox4 SRY-box transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN ascending aorta morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); cardiac right ventricle morphogenesis (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Asphyxia (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955483 5076664 5077059 - 106146545 AGCD01057752;GBDJ01023868;GBDJ01107737;XM_013503841 XP_013359295 MODEL 8865165 ncrna LOC102018491 uncharacterized LOC102018491 NW_004955416 21069345 21083402 + 102018491 AGCD01017496;GBCB01076411;XR_001233319;XR_001233320;XR_260403;XR_260405;XR_260406 MODEL 8935611 pseudo LOC102004666 zinc finger and SCAN domain-containing protein 4-like NW_004955405 11735072 11756169 - 102004666 AGCD01004838;AGCD01004839;AGCD01004840;AGCD01004841 MODEL 8747775 protein-coding Sh3bp5l SH3 binding domain protein 5 like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955418 29884660 29893611 - 102019063 AGCD01019488;GBDF01276737;XM_005382328;XM_013513008 XP_005382385;XP_013368462 MODEL 8955044 protein-coding Bricd5 BRICHOS domain containing 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955442 15054116 15056506 + 102028586 AGCD01037856;GBDF01024331;XM_005391445;XM_005391446;XM_013517734;XM_013517735 XP_005391502;XP_005391503;XP_013373188;XP_013373189 MODEL 8968557 protein-coding Rem2 RRAD and GEM like GTPase 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955409 37403758 37408312 - 102030048 AGCD01010511;GBDI01226110;XM_005377113 XP_005377170 MODEL 39134121 misc_rna 7SK 7SK RNA 9052553 ncrna LOC102004298 uncharacterized LOC102004298 NW_004955425 26216844 26372863 + 102004298 AGCD01025943;AGCD01025944;AGCD01025945;AGCD01025946;AGCD01025947;AGCD01025948;GBDK01344416;XR_001234297;XR_001234298 MODEL 8981889 protein-coding Prox2 prospero homeobox 2 ASSOCIATED WITH melanoma (ortholog); sarcoma (ortholog) NW_004955523 697475 708675 + 102016410 AGCD01068476;GBDF01279087;XM_005409386 XP_005409443 MODEL 8933771 protein-coding Flna filamin A ENCODES a protein that exhibits actin filament binding (ortholog); DNA-binding transcription factor binding (ortholog); Fc-gamma receptor I complex binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; integrin mediated signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actin filament bundle (ortholog) NW_004955580 874233 895172 + 102028037 AGCD01075628;GBDI01017513;GBDJ01003927;XM_013509692 XP_013365146 MODEL 39131914 rrna 5S_rRNA 5S ribosomal RNA 39133985 misc_rna 7SK 7SK RNA 8936219 ncrna LOC102006097 uncharacterized LOC102006097 NW_004955456 4283151 4286706 - 102006097 AGCD01046296;GBDF01251661;XR_262881 MODEL 39131771 rrna 5S_rRNA 5S ribosomal RNA 8912546 protein-coding Ak2 adenylate kinase 2 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleobase-containing compound kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); dATP metabolic process (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; de novo purine biosynthetic pathway; tenofovir pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog); sperm flagellum (ortholog); sperm mitochondrial sheath (ortholog) NW_004955452 11254853 11275587 - 102005553 AGCD01044333;GBCQ01035299;XM_005395104;XM_005395105 XP_005395161;XP_005395162 MODEL 8916597 protein-coding Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit X ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent peptidase activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH Erythropoietic Protoporphyria 2 (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endopeptidase Clp complex (ortholog); mitochondrial endopeptidase Clp complex (ortholog); mitochondrial matrix (ortholog) NW_004955450 10256124 10289832 + 102008999 AGCD01042609;GBDF01006056;XM_005393725;XM_005393726 XP_005393782;XP_005393783 MODEL 9042418 protein-coding LOC102009114 olfactory receptor 1F1-like NW_004955442 14172448 14196764 - 102009114 AGCD01037803;AGCD01037804;AGCD01037805;AGCD01037806;GBDF01061825;XM_005391855 XP_005391912 MODEL 8977401 protein-coding Slc46a1 solute carrier family 46 member 1 ENCODES a protein that exhibits folic acid transmembrane transporter activity (ortholog); folic acid:proton symporter activity (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN folate import across plasma membrane (ortholog); folate transmembrane transport (ortholog); folic acid transport (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH anemia (ortholog); chronic kidney disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955481 4735325 4741810 + 102004814 AGCD01056950;GBDK01190488;XM_005402755 XP_005402812 MODEL 8857945 protein-coding Anapc13 anaphase promoting complex subunit 13 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955501 4096026 4103212 + 102021369 AGCD01064111;GBDF01088790;XM_005406787 XP_005406844 MODEL 9036180 protein-coding Ilkap ILK associated serine/threonine phosphatase ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); regulation of nuclear cell cycle DNA replication (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955542 2391432 2407559 + 102015769 AGCD01071522;GBCQ01094302;GBDF01124379;XM_013508014 XP_013363468 MODEL 8879634 protein-coding Cenpa centromere protein A INVOLVED IN CENP-A containing chromatin assembly (ortholog); establishment of mitotic spindle orientation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN CENP-A containing chromatin (ortholog); CENP-A containing nucleosome (ortholog); chromosome, centromeric region (ortholog) NW_004955469 8799312 8819637 + 102015830 AGCD01052482;GBDF01084944;XM_005400440;XM_005400441 XP_005400497;XP_005400498 MODEL 39134266 misc_rna 7SK 7SK RNA 8826230 protein-coding Cfl1 cofilin 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); actin filament severing activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); cell motility (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH brain compression (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cell leading edge (ortholog); cell-cell junction (ortholog); cofilin-actin rod (ortholog) NW_004955422 19479181 19482571 + 102027078 AGCD01023011;GBDI01011011;XM_013513851 XP_013369305 MODEL 8824490 trna trnI tRNA-Ile MT 3680 3747 + 15822203 8966539 protein-coding LOC102011064 transmembrane protease serine 11D NW_004955447 4999930 5082159 + 102011064 AGCD01040736;AGCD01040737;AGCD01040738;AGCD01040739;AGCD01040740;AGCD01040741;GBDI01165135;XM_013518471 XP_013373925 MODEL 8933402 protein-coding Rtp4 receptor transporter protein 4 INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Human Influenza (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955420 20435924 20459440 - 102028423 AGCD01021092;XM_013513337 XP_013368791 MODEL 8825057 protein-coding Sox5 SRY-box transcription factor 5 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN asymmetric neuroblast division (ortholog); cartilage condensation (ortholog); cartilage development (ortholog); ASSOCIATED WITH Asthma-Chronic Obstructive Pulmonary Disease Overlap Syndrome (ortholog); astigmatism (ortholog); atrial fibrillation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955413 18831931 19676371 - 102025340 AGCD01014193;AGCD01014194;AGCD01014195;AGCD01014196;AGCD01014197;AGCD01014198;AGCD01014199;AGCD01014200;AGCD01014201;GBDJ01347233;XM_005379082;XM_005379083;XM_005379084;XM_005379086;XM_005379087;XM_005379090;XM_005379093;XM_013511607;XM_013511608;XM_013511609 XP_005379139;XP_005379140;XP_005379141;XP_005379143;XP_005379144;XP_005379147;XP_005379150;XP_013367061;XP_013367062;XP_013367063 MODEL 8723910 pseudo LOC102003240 bridging integrator 2-like NW_004955418 22080594 22081909 - 102003240 AGCD01019279 MODEL 8804149 pseudo LOC102008343 40S ribosomal protein S6 pseudogene NW_004955515 3520030 3520862 + 102008343 AGCD01067288 MODEL 8963736 protein-coding Pmel premelanosome protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN eye development (ortholog); melanin biosynthetic process (ortholog); melanosome organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); coat/hair pigmentation trait (ortholog); esophageal cancer (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955458 3544855 3555453 - 102025878 AGCD01047317;AGCD01047318;AGCD01047319;GBBH01103110;XM_005397275;XM_005397277;XM_005397278 XP_005397332;XP_005397334;XP_005397335 MODEL 9004461 protein-coding Atp1b2 ATPase Na+/K+ transporting subunit beta 2 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN cell-substrate adhesion (ortholog); intracellular potassium ion homeostasis (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cerebellar ataxia (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte end-foot (ortholog); astrocyte projection (ortholog) NW_004955467 9261775 9268743 - 102005129 AGCD01051486;GBDF01252804;XM_005399462 XP_005399519 MODEL 8992440 protein-coding LOC102010304 protein LEG1 homolog NW_004955436 8564756 8573875 + 102010304 AGCD01033743;GBBH01076388;XM_005389173 XP_005389230 MODEL 9025663 protein-coding Adgrl2 adhesion G protein-coupled receptor L2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN excitatory synapse assembly (ortholog); response to bacterium (ortholog); synapse organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) NW_004955423 11789313 12062478 - 102008638 AGCD01023705;AGCD01023706;AGCD01023707;AGCD01023708;AGCD01023709;AGCD01023710;GBDK01090032;XM_013514474;XM_013514475;XM_013514476;XM_013514477;XM_013514478;XM_013514479;XM_013514480;XM_013514481;XM_013514482;XM_013514483;XM_013514484;XM_013514485 XP_013369928;XP_013369929;XP_013369930;XP_013369931;XP_013369932;XP_013369933;XP_013369934;XP_013369935;XP_013369936;XP_013369937;XP_013369938;XP_013369939 MODEL 8802157 protein-coding LOC102013514 vomeronasal type-1 receptor 4-like NW_004955494 8280036 8280923 + 102013514 AGCD01061582;XM_005405545 XP_005405602 MODEL 8916076 protein-coding LOC102012303 NADH-cytochrome b5 reductase 3 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); INVOLVED IN nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955413 27971140 27979905 - 102012303 AGCD01014539;GBCB01020264;GBDI01016413;XM_013511507 XP_013366961 MODEL 8806755 protein-coding LOC102014231 interferon lambda-4-like NW_004955468 295047 309275 - 102014231 AGCD01051688;AGCD01051689;XM_013522287 XP_013377741 MODEL 8860849 protein-coding Cdc50b cell division cycle 50 P4-ATPase accessory subunit B ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); INVOLVED IN aminophospholipid transport (ortholog); endosomal transport (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) NW_004955466 8426706 8430851 + 102013399 AGCD01050989;GBCE01074938;GBDK01075274;XM_005399166 XP_005399223 MODEL 8804578 protein-coding LOC102022572 indolethylamine N-methyltransferase NW_004955410 31925147 31930528 + 102022572 AGCD01011334;GBCE01074653;XM_005377506 XP_005377563 MODEL 8951451 pseudo LOC102011915 solute carrier family 35 member G1-like NW_004955549 2589395 2589895 + 102011915 AGCD01072478 MODEL 8911930 pseudo LOC102008757 60S acidic ribosomal protein P0 pseudogene NW_004955429 2174980 2180342 + 102008757 AGCD01028416 MODEL 9050627 pseudo LOC102018502 mitochondrial folate transporter/carrier pseudogene NW_004955487 5235509 5238027 - 102018502 AGCD01059323 MODEL 8968408 protein-coding Ero1b endoplasmic reticulum oxidoreductase 1 beta ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); extracellular matrix organization (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); membrane (ortholog) NW_004955492 3845406 3911671 + 102021987 AGCD01060701;AGCD01060702;AGCD01060703;AGCD01060704;AGCD01060705;GBBH01198228;GBDF01009565;XM_013504712 XP_013360166 MODEL 8841483 protein-coding LOC102013850 S-methylmethionine--homocysteine S-methyltransferase BHMT2 NW_004955425 22029596 22040812 - 102013850 AGCD01025812;GBDK01350932;XM_005386016 XP_005386073 MODEL 39131423 protein-coding AP3S2 adaptor related protein complex 3 subunit sigma 2 8921295 ncrna LOC102007202 uncharacterized LOC102007202 NW_004955410 35720695 35722354 + 102007202 AGCD01011413;GBDF01055303;XR_259904 MODEL 9022162 protein-coding Acta1 actin alpha 1, skeletal muscle ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to potassium ion (ortholog); response to mechanical stimulus (ortholog); response to steroid hormone (ortholog); ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); aortic dissection (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); sarcomere (ortholog) NW_004955492 8644696 8647412 + 102017886 AGCD01060822;GBDK01324003;XM_005405008 XP_005405065 MODEL 8871431 protein-coding B3gnt8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955555 357726 359695 - 102018340 AGCD01073024;GBDJ01029590;XM_005412350 XP_005412407 MODEL 8735993 protein-coding Sox6 SRY-box transcription factor 6 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte differentiation (ortholog); brain development (ortholog); cardiac muscle cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 30965626 31532473 - 102027517 AGCD01015742;AGCD01015743;AGCD01015744;AGCD01015745;AGCD01015746;AGCD01015747;AGCD01015748;AGCD01015749;AGCD01015750;AGCD01015751;AGCD01015752;AGCD01015753;AGCD01015754;GBDF01281648;XM_005380342;XM_005380343;XM_005380355;XM_005380356;XM_005380357;XM_013511913;XM_013511914;XM_013511915;XM_013511916;XM_013511917;XM_013511918;XM_013511919;XM_013511920;XM_013511921;XM_013511922;XM_013511923;XM_013511924;XM_013511925;XM_013511926;XM_013511927;XM_013511928;XM_013511929;XM_013511930;XM_013511931;XM_013511932;XM_013511933 XP_005380399;XP_005380400;XP_005380412;XP_005380413;XP_005380414;XP_013367367;XP_013367368;XP_013367369;XP_013367370;XP_013367371;XP_013367372;XP_013367373;XP_013367374;XP_013367375;XP_013367376;XP_013367377;XP_013367378;XP_013367379;XP_013367380;XP_013367381;XP_013367382;XP_013367383;XP_013367384;XP_013367385;XP_013367386;XP_013367387 MODEL 8772269 pseudo LOC102009892 zinc finger CCCH domain-containing protein 15-like NW_004955566 44899 55696 + 102009892 AGCD01074343 MODEL 8728733 ncrna LOC102006098 uncharacterized LOC102006098 NW_004955456 14622794 14651850 - 102006098 AGCD01046645;AGCD01046646;GBDF01252370;XR_001236327;XR_001236328;XR_001236329;XR_001236330;XR_262904;XR_262905 MODEL 8799819 pseudo LOC102007581 glutamate dehydrogenase 1, mitochondrial-like NW_004955433 562648 564548 - 102007581 AGCD01031327 MODEL 8785522 protein-coding Clrn1 clarin 1 INVOLVED IN actin filament organization (ortholog); auditory receptor cell development (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH branchiootorenal syndrome (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN basal part of cell (ortholog); lamellipodium (ortholog); microtubule cytoskeleton (ortholog) NW_004955448 2062647 2106548 - 102027797 AGCD01041274;AGCD01041275;AGCD01041276;XM_005393016;XM_005393017;XM_005393018 XP_005393073;XP_005393074;XP_005393075 MODEL 8921769 protein-coding Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); misfolded protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN B cell differentiation (ortholog); ERAD pathway (ortholog); positive regulation of immunoglobulin production (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955410 12814993 12820852 + 102012070 AGCD01010872;AGCD01010873;GBCE01004384;XM_005377307 XP_005377364 MODEL 9029607 protein-coding Wfs1 wolframin ER transmembrane glycoprotein ENCODES a protein that exhibits ATPase binding (ortholog); calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); anemia (ortholog); Ataxia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); secretory granule (ortholog) NW_004955514 3902508 3924281 - 102020042 AGCD01067119;AGCD01067120;AGCD01067121;GBCB01055926;GBDK01133953;XM_013506848 XP_013362302 MODEL 39134267 misc_rna 7SK 7SK RNA 8702196 ncrna LOC102004673 uncharacterized LOC102004673 NW_004955406 23278454 23287251 - 102004673 AGCD01006169;GBDK01311017;XR_001230927;XR_259505 MODEL 8981293 protein-coding Anapc15 anaphase promoting complex subunit 15 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955414 19218727 19222138 + 102027513 AGCD01015308;GBCB01023059;XM_005379996;XM_005379998;XM_005380000;XM_005380003;XM_005380004;XM_005380005;XM_013511824 XP_005380053;XP_005380055;XP_005380057;XP_005380060;XP_005380061;XP_005380062;XP_013367278 MODEL 8772544 protein-coding Cfl2 cofilin 2 ENCODES a protein that exhibits actin filament binding (ortholog); actin filament severing activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); muscle cell cellular homeostasis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN I band (ortholog); Z disc (ortholog) NW_004955409 26247050 26250082 + 102006429 AGCD01010166;GBDF01004915;GBDJ01086349;XM_013510377 XP_013365831 MODEL 8823120 trna trnK(ttt) tRNA-Lys MT 7704 7770 + 15822206 8794498 protein-coding Brinp1 BMP/retinoic acid inducible neural specific 1 INVOLVED IN behavioral fear response (ortholog); brain development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955419 8529213 8704113 + 102029398 AGCD01019899;AGCD01019900;GBBH01200609;XM_005382605 XP_005382662 MODEL 8893510 protein-coding LOC102004305 olfactory receptor 9I1-like NW_004955511 3072937 3073479 + 102004305 AGCD01066440;XM_013506379 XP_013361833 MODEL 8820968 protein-coding Proz protein Z, vitamin K dependent plasma glycoprotein INVOLVED IN blood coagulation (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH Behcet's disease (ortholog); blood coagulation disease (ortholog); brain ischemia (ortholog); FOUND IN extracellular region (ortholog) NW_004955404 647217 657256 - 102006862 AGCD01003206;XM_005373954;XM_013515581;XM_013515592 XP_005374011;XP_013371035;XP_013371046 MODEL 8856621 protein-coding Pmepa1 prostate transmembrane protein, androgen induced 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); R-SMAD binding (ortholog); WW domain binding (ortholog); INVOLVED IN negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome membrane (ortholog); endosome membrane (ortholog); Golgi membrane (ortholog) NW_004955445 1837084 1847214 + 102030250 AGCD01039346;GBCE01055931;XM_005392247 XP_005392304 MODEL 39131915 rrna 5S_rRNA 5S ribosomal RNA 8717997 protein-coding Flnb filamin B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to type II interferon (ortholog); epithelial cell morphogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Absent Patella (ortholog); acute myeloid leukemia (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955430 7680394 7832124 + 102020827 AGCD01029367;AGCD01029368;AGCD01029369;AGCD01029370;AGCD01029371;GBDF01196019;XM_005387431;XM_005387432;XM_005387433;XM_013515640 XP_005387488;XP_005387489;XP_005387490;XP_013371094 MODEL 8718147 protein-coding Ak3 adenylate kinase 3 ENCODES a protein that exhibits AMP kinase activity (ortholog); identical protein binding (ortholog); nucleoside triphosphate adenylate kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); AMP phosphorylation (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo purine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH chronic lymphocytic leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955434 8998357 9010468 - 102027332 AGCD01032282;GBBH01062690;GBCE01029526;XM_013516310 XP_013371764 MODEL 8997876 ncrna LOC102005026 uncharacterized LOC102005026 NW_004955414 4244433 4270227 + 102005026 AGCD01014860;GBDF01127962;XR_001233072;XR_001233073;XR_260151 MODEL 8815169 protein-coding Atp1b3 ATPase Na+/K+ transporting subunit beta 3 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN intracellular potassium ion homeostasis (ortholog); intracellular sodium ion homeostasis (ortholog); membrane repolarization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955508 3848745 3875992 - 102016938 AGCD01065839;AGCD01065840;AGCD01065841;AGCD01065842;AGCD01065843;GBDF01224103;XM_005407753;XM_013506258 XP_005407810;XP_013361712 MODEL 8775914 protein-coding Dach2 dachshund family transcription factor 2 INVOLVED IN development of primary female sexual characteristics (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog) NW_004955525 667452 1285776 + 102017909 AGCD01069004;AGCD01069005;AGCD01069006;AGCD01069007;AGCD01069008;AGCD01069009;AGCD01069010;AGCD01069011;AGCD01069012;AGCD01069013;AGCD01069014;AGCD01069015;AGCD01069016;AGCD01069017;AGCD01069018;AGCD01069019;AGCD01069020;AGCD01069021;AGCD01069022;AGCD01069023;AGCD01069024;AGCD01069025;AGCD01069026;AGCD01069027;AGCD01069028;AGCD01069029;AGCD01069030;AGCD01069031;XM_005409722 XP_005409779 MODEL 9012331 protein-coding Slc46a2 solute carrier family 46 member 2 ENCODES a protein that exhibits cyclic-GMP-AMP transmembrane transporter activity (ortholog); INVOLVED IN cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); negative regulation of T cell apoptotic process (ortholog); positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN cell surface (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) NW_004955419 14547393 14557447 + 102030424 AGCD01020028;GBDJ01084745;XM_005382700 XP_005382757 MODEL 8937174 pseudo LOC102022573 centrosomal protein of 57 kDa-like NW_004955410 22742948 22744516 + 102022573 AGCD01011082 MODEL 8760038 protein-coding Abhd1 abhydrolase domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955469 9092074 9097635 + 102021232 AGCD01052489;GBDF01176276;XM_005400458;XM_005400459;XM_005400460;XM_005400461 XP_005400515;XP_005400516;XP_005400517;XP_005400518 MODEL 8703205 protein-coding Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of protein localization to nucleus (ortholog); negative regulation of tumor necrosis factor production (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955437 2697998 2769998 - 102018326 AGCD01034284;AGCD01034285;GBDF01007654;GBDK01126877;XM_005389532 XP_005389589 MODEL 8750242 ncrna LOC102007586 uncharacterized LOC102007586 NW_004955435 13055123 13064175 + 102007586 AGCD01033177;GBBH01079921;XR_261684 MODEL 8835181 protein-coding Cenpb centromere protein B ASSOCIATED WITH inner ear disease (ortholog); primary biliary cholangitis (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955415 14626154 14628749 - 102005800 AGCD01016301;GBBH01060400;GBCQ01041208;XM_005381132 XP_005381189 MODEL 39134122 misc_rna 7SK 7SK RNA 8932790 protein-coding Ca8 carbonic anhydrase 8 (inactive) INVOLVED IN positive regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 34 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955444 18414006 18510800 + 102015251 AGCD01039238;AGCD01039239;AGCD01039240;AGCD01039241;AGCD01039242;GBCE01129803;GBDJ01215247;XM_013518186 XP_013373640 MODEL 9035663 protein-coding Sh3d19 SH3 domain containing 19 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN positive regulation of membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955471 5724303 5810868 - 102023256 AGCD01053113;GBDJ01086123;GBDK01085587;XM_013522884;XM_013522885;XM_013522886;XM_013522887 XP_013378338;XP_013378339;XP_013378340;XP_013378341 MODEL 9066599 protein-coding Ren renin ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); insulin-like growth factor receptor binding (ortholog); INVOLVED IN angiotensin maturation (ortholog); cell maturation (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN benazepril pharmacodynamics pathway; candesartan pharmacodynamics pathway; captopril pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); anemia (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955406 40016624 40026286 - 102018155 AGCD01006651;XM_005375286 XP_005375343 MODEL 8949870 protein-coding Rtp5 receptor transporter protein 5 (putative) ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955542 40344 43885 - 102029120 AGCD01071456;XM_005411103 XP_005411160 MODEL 9043073 pseudo LOC102008345 phosducin-like protein 3 pseudogene NW_004955434 11550951 11551673 + 102008345 AGCD01032380 MODEL 8989798 protein-coding LOC102003241 MARVEL domain-containing protein 3-like NW_004955484 4331566 4346570 + 102003241 AGCD01058209;AGCD01058210;GBCQ01038738;XM_013503949 XP_013359403 MODEL 39131772 rrna 5S_rRNA 5S ribosomal RNA 9007653 protein-coding Arhgap28 Rho GTPase activating protein 28 INVOLVED IN negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH allergic disease (ortholog); cervical cancer (ortholog); endometriosis (ortholog) NW_004955402 4417978 4531683 - 102004993 AGCD01000122;AGCD01000123;GBCE01069815;XM_013516584;XM_013516601;XM_013516633;XM_013516662 XP_013372038;XP_013372055;XP_013372087;XP_013372116 MODEL 8941900 protein-coding Cdc5l cell division cycle 5 like ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); leucine zipper domain binding (ortholog); INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-2 (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); DNA replication factor A complex (ortholog) NW_004955437 9990613 10032034 + 102024383 AGCD01034555;AGCD01034556;GBDF01003263;XM_013517013 XP_013372467 MODEL 8838885 pseudo LOC102007204 IST1 homolog pseudogene NW_004955463 5955659 5975823 - 102007204 AGCD01049650;AGCD01049651;AGCD01049652 MODEL 8810527 pseudo LOC102012305 60S ribosomal protein L26-like 1 pseudogene NW_004955468 11168153 11174462 - 102012305 AGCD01052119 MODEL 8784459 protein-coding Lrp1b LDL receptor related protein 1B ENCODES a protein that exhibits low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN membrane (ortholog); signaling receptor complex (ortholog) NW_004955440 7048527 8475566 - 102017063 AGCD01036325;AGCD01036326;AGCD01036327;AGCD01036328;AGCD01036329;AGCD01036330;AGCD01036331;AGCD01036332;AGCD01036333;AGCD01036334;AGCD01036335;AGCD01036336;AGCD01036337;AGCD01036338;AGCD01036339;AGCD01036340;AGCD01036341;AGCD01036342;AGCD01036343;AGCD01036344;AGCD01036345;AGCD01036346;AGCD01036347;AGCD01036348;AGCD01036349;AGCD01036350;AGCD01036351;AGCD01036352;AGCD01036353;AGCD01036354;AGCD01036355;AGCD01036356;AGCD01036357;GBDF01182714;XM_013517439 XP_013372893 MODEL 8753411 ncrna LOC102009116 uncharacterized LOC102009116 NW_004955561 1295394 1311775 + 102009116 AGCD01073847;AGCD01073848;GBDF01260254;XR_001232356 MODEL 8740468 ncrna LOC102014232 uncharacterized LOC102014232 NW_004955470 3643885 3651775 + 102014232 AGCD01052706;GBDF01189926;XR_263467 MODEL 8809302 protein-coding B3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); rheumatoid arthritis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955484 9462517 9467314 + 102016919 AGCD01058415;GBDI01255314;XM_005403702 XP_005403759 MODEL 8934089 protein-coding LOC102013519 probable N-acetyltransferase CML1 NW_004955424 12047830 12049545 + 102013519 AGCD01024593;GBCQ01036376;XM_005385553 XP_005385610 MODEL 8705699 pseudo LOC102005028 FACT complex subunit SSRP1 pseudogene NW_004955469 10948388 10950687 - 102005028 AGCD01052552 MODEL 8755540 pseudo LOC102011065 60S ribosomal protein L4-like NW_004955447 17826623 17831419 + 102011065 AGCD01041137 MODEL 8847609 protein-coding Dact1 dishevelled binding antagonist of beta catenin 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); delta-catenin binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); dendrite morphogenesis (ortholog); embryonic hindgut morphogenesis (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome (ortholog); Colorectal Neoplasms (ortholog); lung cancer (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955466 12367760 12374141 + 102022483 AGCD01051127;GBCE01045780;GBCQ01030468;XM_013522014 XP_013377468 MODEL 8851458 protein-coding Atp1b4 ATPase Na+/K+ transporting family member beta 4 INVOLVED IN regulation of DNA-templated transcription (ortholog); transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) NW_004955572 1507290 1524359 - 102005526 AGCD01074954;GBDI01089270;XM_005413663;XM_005413664;XM_005413665;XM_013509443 XP_005413720;XP_005413721;XP_005413722;XP_013364897 MODEL 8766255 protein-coding Slc46a3 solute carrier family 46 member 3 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN cellular response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); vacuolar transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955497 8015244 8034195 - 102007674 AGCD01062692;GBCE01134273;XM_005406361;XM_005406362;XR_264212 XP_005406418;XP_005406419 MODEL 8914901 protein-coding LOC102013854 uncharacterized LOC102013854 NW_004955506 4657596 4686979 + 102013854 AGCD01065342;GBDI01275212;XM_013506140;XR_001231607;XR_001231608;XR_001231609;XR_001231610;XR_001231611;XR_001231612;XR_001231613;XR_001231614;XR_001231615;XR_264353 XP_013361594 MODEL 9006878 protein-coding Erp27 endoplasmic reticulum protein 27 ASSOCIATED WITH acute myeloid leukemia (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955413 11650920 11670127 - 102004050 AGCD01013966;GBCE01143801;XM_005379014;XM_013511584;XM_013511585 XP_005379071;XP_013367038;XP_013367039 MODEL 8885314 protein-coding Anapc16 anaphase promoting complex subunit 16 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 19367662 19381607 - 102030475 AGCD01034846;AGCD01034847;GBCQ01001144;XM_005390017;XM_005390018 XP_005390074;XP_005390075 MODEL 8793483 protein-coding Cflar CASP8 and FADD like apoptosis regulator ENCODES a protein that exhibits death receptor binding (ortholog); enzyme activator activity (ortholog); peptidase activator activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Carotid Artery Injuries (ortholog); congestive heart failure (ortholog); FOUND IN caspase complex (ortholog); CD95 death-inducing signaling complex (ortholog); cytoplasm (ortholog) NW_004955403 415092 442214 - 102021722 AGCD01001691;GBCE01120410;XM_005373203;XM_005373204;XM_005373205;XM_005373206;XM_005373208;XM_013511733;XM_013511737;XM_013511739;XM_013511740 XP_005373260;XP_005373261;XP_005373262;XP_005373263;XP_005373265;XP_013367187;XP_013367191;XP_013367193;XP_013367194 MODEL 8950745 pseudo LOC102010305 protein archease pseudogene NW_004955532 1134983 1135508 + 102010305 AGCD01070166 MODEL 8900195 protein-coding Ap4b1 adaptor related protein complex 4 subunit beta 1 INVOLVED IN protein localization to somatodendritic compartment (ortholog); protein targeting (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 47 (ortholog); FOUND IN AP-4 adaptor complex (ortholog); cytoplasmic side of trans-Golgi network transport vesicle membrane (ortholog); cytosol (ortholog) NW_004955435 17163099 17173427 - 102015562 AGCD01033347;GBCB01025564;XM_005388988;XM_005388989;XM_005388990;XM_005388991;XM_013516537 XP_005389045;XP_005389046;XP_005389047;XP_005389048;XP_013371991 MODEL 8926856 protein-coding Adgrl3 adhesion G protein-coupled receptor L3 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion mediator activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell-cell adhesion (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN anchoring junction (ortholog); axon (ortholog); cell-cell junction (ortholog) NW_004955447 9912679 10708743 - 102017720 AGCD01040866;AGCD01040867;AGCD01040868;AGCD01040869;AGCD01040870;AGCD01040871;AGCD01040872;AGCD01040873;AGCD01040874;AGCD01040875;AGCD01040876;AGCD01040877;AGCD01040878;AGCD01040879;AGCD01040880;AGCD01040881;AGCD01040882;AGCD01040883;AGCD01040884;AGCD01040885;AGCD01040886;AGCD01040887;GBCB01124366;XM_005392854;XM_005392856;XM_005392857;XM_005392859;XM_005392861;XM_005392862;XM_005392863;XM_013518568;XM_013518569;XM_013518570;XM_013518571 XP_005392911;XP_005392913;XP_005392914;XP_005392916;XP_005392918;XP_005392919;XP_005392920;XP_013374022;XP_013374023;XP_013374024;XP_013374025 MODEL 8865643 protein-coding LOC102011918 extensin-like NW_004955559 469599 475119 + 102011918 AGCD01073586;AGCD01073587;GBDF01008163;XM_005412762;XM_005412763;XM_013508926;XR_001232336 XP_005412819;XP_005412820;XP_013364380 MODEL 8952132 pseudo LOC102009895 DNA damage-regulated autophagy modulator protein 2 pseudogene NW_004955446 16745148 16746679 - 102009895 AGCD01040349 MODEL 8793078 ncrna LOC102008759 uncharacterized LOC102008759 NW_004955432 20992358 20999001 - 102008759 AGCD01031212;AGCD01031213;GBDF01076071;XR_261539 MODEL 730469039 misc_rna CLRN1-AS1 CLRN1 antisense RNA 1 conserved region 10217406 protein-coding Ccdc162 chromosome unknown C6orf183 homolog NW_004955411 34213618 34330343 + 106146276 AGCD01012389;AGCD01012390;AGCD01012391;AGCD01012392;AGCD01012393;AGCD01012394;AGCD01012395;AGCD01012396;AGCD01012397;GBDI01020843;XM_013510799;XM_013510800;XM_013510801;XM_013510802;XM_013510803;XM_013510804;XM_013510805 XP_013366253;XP_013366254;XP_013366255;XP_013366256;XP_013366257;XP_013366258;XP_013366259 MODEL 8715244 trna trnL1(tag) tRNA-Leu MT 11681 11750 + 15822232 9040876 protein-coding Whamm WASP homolog associated with actin, golgi membranes and microtubules ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH Fanconi syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955416 13825925 13849883 - 102005372 AGCD01017234;AGCD01017235;GBBH01172264;GBCB01026385;XM_013512488 XP_013367942 MODEL 8893681 ncrna LOC102007596 uncharacterized LOC102007596 NW_004955441 5524667 5614034 - 102007596 AGCD01036879;AGCD01036880;GBDF01251487;XR_262050 MODEL 9036921 protein-coding Ca9 carbonic anhydrase 9 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); molecular function activator activity (ortholog); zinc ion binding (ortholog); INVOLVED IN morphogenesis of an epithelium (ortholog); response to hypoxia (ortholog); response to testosterone (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Anaplasia (ortholog); breast carcinoma (ortholog); chronic myelogenous leukemia, BCR-ABL1 positive (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955472 619084 625570 - 102010361 AGCD01053342;AGCD01053343;GBCB01065795;XM_005401177 XP_005401234 MODEL 8712895 protein-coding Pmfbp1 polyamine modulated factor 1 binding protein 1 INVOLVED IN gene expression (ortholog); intracellular protein localization (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog); sperm head (ortholog) NW_004955484 4776358 4822312 - 102018933 AGCD01058232;GBDF01043820;XM_005403532;XM_013503846;XM_013503847 XP_005403589;XP_013359300;XP_013359301 MODEL 8945811 protein-coding Acta2 actin alpha 2, smooth muscle ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); glomerular mesangial cell development (ortholog); juxtaglomerular apparatus development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH aortic disease (ortholog); aortic dissection (ortholog); atrial heart septal defect (ortholog); FOUND IN actin cytoskeleton (ortholog); basement membrane (ortholog); cytoplasm (ortholog) NW_004955425 4023001 4039980 + 102019511 AGCD01025307;AGCD01025308;GBCQ01033579;XM_005385859 XP_005385916 MODEL 9016517 protein-coding Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ENCODES a protein that exhibits beta-1 adrenergic receptor binding (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN modulation of excitatory postsynaptic potential (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); regulation of synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955495 4502173 4531758 + 102009625 AGCD01061926;AGCD01061927;GBDF01121282;XM_005405800;XM_005405801 XP_005405857;XP_005405858 MODEL 39131916 rrna 5S_rRNA 5S ribosomal RNA 8782340 protein-coding Sox7 SRY-box transcription factor 7 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN endoderm formation (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955403 52253816 52259884 - 102024079 AGCD01003003;GBDJ01190984;XM_005373806 XP_005373863 MODEL 9027280 protein-coding Prp4k pre-mRNA processing factor kinase PRP4K ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of hippo signaling (ortholog); positive regulation of protein export from nucleus (ortholog); regulation of mitotic cell cycle spindle assembly checkpoint (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromosome (ortholog); kinetochore (ortholog) NW_004955465 9359634 9392913 - 102012619 AGCD01050491;AGCD01050492;GBBH01026999;XM_005398892;XR_001236750;XR_263254;XR_263256;XR_263258;XR_263259;XR_263260 XP_005398949 MODEL 8803533 protein-coding Arhgap29 Rho GTPase activating protein 29 ENCODES a protein that exhibits PDZ domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cleft lip (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955423 511635 570593 + 102009958 AGCD01023414;GBCB01101021;GBCE01076037;XM_005384999 XP_005385056 MODEL 8790293 protein-coding Flnc filamin C ENCODES a protein that exhibits ankyrin binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN muscle cell development (ortholog); sarcomere organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sarcolemma (ortholog) NW_004955479 9633817 9661725 + 102003129 AGCD01056485;GBCB01006284;XM_005402388;XM_005402389;XM_005402390;XM_005402391 XP_005402445;XP_005402446;XP_005402447;XP_005402448 MODEL 8836714 protein-coding Ak4 adenylate kinase 4 ENCODES a protein that exhibits AMP kinase activity (ortholog); CMP kinase activity (ortholog); dAMP kinase activity (ortholog); INVOLVED IN AMP metabolic process (ortholog); ATP metabolic process (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955423 25395086 25402324 - 102006256 AGCD01024070;GBCQ01001095;GBDI01026715;XM_013514473 XP_013369927 MODEL 8739347 protein-coding LOC102007206 histone H2A type 1 NW_004955465 13392074 13392621 - 102007206 AGCD01050607;XM_005398951 XP_005399008 MODEL 8935277 ncrna LOC102009117 uncharacterized LOC102009117 NW_004955563 897520 906409 - 102009117 AGCD01074095;GBDF01019723;XR_001232368;XR_265015 MODEL 8759302 pseudo LOC102022574 eukaryotic translation initiation factor 4B pseudogene NW_004955464 1895737 1897508 + 102022574 AGCD01049957;XR_263224 MODEL 8824262 protein-coding LOC102018506 cytochrome c oxidase subunit 4 isoform 2, mitochondrial INVOLVED IN cellular response to hypoxia (ortholog); mitochondrial electron transport, cytochrome c to oxygen (ortholog); ASSOCIATED WITH Exocrine Pancreatic Insufficiency, Dyserythropoietic Anemia, and Calvarial Hyperostosis (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955422 29320720 29329082 - 102018506 AGCD01023390;GBBH01150060;GBCQ01033098;XM_005384903 XP_005384960 MODEL 8777398 ncrna LOC102004680 uncharacterized LOC102004680 NW_004955461 2769426 3001729 + 102004680 AGCD01048841;AGCD01048842;AGCD01048843;AGCD01048844;AGCD01048845;GBCE01007435;XR_001236575;XR_001236576;XR_001236577;XR_001236578;XR_001236579;XR_001236580;XR_263075 MODEL 8996279 protein-coding B3gntl1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 ENCODES a protein that exhibits tRNA-queuosine(34) galactosyltransferase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA modification (ortholog); tRNA wobble guanine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955506 165383 272051 + 102003989 AGCD01065216;AGCD01065217;AGCD01065218;GBDF01248941;XM_005407178;XM_005407179;XM_013506005;XM_013506006 XP_005407235;XP_005407236;XP_013361459;XP_013361460 MODEL 8877950 protein-coding Ilvbl ilvB acetolactate synthase like INVOLVED IN fatty acid alpha-oxidation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955495 8130875 8140152 + 102011677 AGCD01062185;GBDI01187952;XM_005406091;XM_005406093;XM_005406094 XP_005406148;XP_005406150;XP_005406151 MODEL 8881952 protein-coding LOC102009896 transmembrane protease serine 11F NW_004955447 4757521 4834971 + 102009896 AGCD01040733;GBDF01305457;XM_005392827 XP_005392884 MODEL 8911879 protein-coding LOC102006100 TIR domain-containing adapter molecule 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of chemokine (C-C motif) ligand 5 production (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955408 35342733 35382821 - 102006100 AGCD01008938;AGCD01008939;GBBH01033904;GBDK01342442;XM_005376595 XP_005376652 MODEL 8862910 ncrna LOC102004307 uncharacterized LOC102004307 NW_004955431 5084453 5109317 - 102004307 AGCD01030014;AGCD01030015;GBDF01050896;XR_001234597;XR_261453;XR_261454;XR_261455 MODEL 8918194 protein-coding Cenpc centromere protein C ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN chromosome segregation (ortholog); kinetochore assembly (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); CREST syndrome (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) NW_004955447 5345617 5406889 + 102013025 AGCD01040751;AGCD01040752;AGCD01040753;GBDF01048245;XM_005392837 XP_005392894 MODEL 8741540 protein-coding Ccdc166 coiled-coil domain containing 166 NW_004955454 2394109 2396694 - 102010864 AGCD01045019;GBDF01194228;XM_005395801 XP_005395858 MODEL 8877078 pseudo LOC102008351 39S ribosomal protein L47, mitochondrial pseudogene NW_004955438 21220270 21221541 - 102008351 AGCD01035530 MODEL 8847927 ncrna LOC102003244 uncharacterized LOC102003244 NW_004955486 8568818 8579925 + 102003244 AGCD01059151;GBDF01224300;XR_001231117;XR_001231118;XR_001231119;XR_263964 MODEL 8827231 pseudo LOC102012309 RAC-gamma serine/threonine-protein kinase-like NW_004955414 21907536 21908908 - 102012309 AGCD01015437 MODEL 8921335 protein-coding Dnajc1 DnaJ heat shock protein family (Hsp40) member C1 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN protein folding (ortholog); regulation of protein secretion (ortholog); regulation of translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955429 6806456 6987579 + 102012989 AGCD01028565;AGCD01028566;AGCD01028567;AGCD01028568;AGCD01028569;AGCD01028570;AGCD01028571;AGCD01028572;AGCD01028573;GBCQ01068779;GBDF01119044;XM_013515403 XP_013370857 MODEL 8943463 protein-coding Renbp renin binding protein ENCODES a protein that exhibits ATP binding (ortholog); enzyme inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN N-acetylglucosamine catabolic process (ortholog); N-acetylglucosamine metabolic process (ortholog); N-acetylmannosamine catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog) NW_004955580 610112 615019 - 102024067 AGCD01075615;GBCE01052970;GBCQ01072116;XM_013509702 XP_013365156 MODEL 39134268 misc_rna 7SK 7SK RNA 8717278 pseudo LOC102011922 protein kinase C iota type pseudogene NW_004955446 1525926 1528371 + 102011922 AGCD01039967;XM_005392599 MODEL 8739258 protein-coding Caap1 caspase activity and apoptosis inhibitor 1 INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955472 7937702 7993252 + 102027966 AGCD01053635;AGCD01053636;AGCD01053637;GBBH01101942;GBDF01086677;XM_013523025 XP_013378479 MODEL 39133986 misc_rna 7SK 7SK RNA 8818004 ncrna LOC102013520 uncharacterized LOC102013520 NW_004955500 5962838 5972280 + 102013520 AGCD01063865;GBDF01213566;XR_264230 MODEL 39134123 misc_rna 7SK 7SK RNA 8797993 protein-coding Dact2 dishevelled binding antagonist of beta catenin 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); delta-catenin binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner medullary collecting duct development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Liver Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955411 4972080 4976011 + 102024538 AGCD01011592;GBCE01037505;GBDF01059772;XM_013510920 XP_013366374 MODEL 8880619 protein-coding Rtraf RNA transcription, translation and transport factor ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); mitotic spindle (ortholog) NW_004955409 11034815 11049400 - 102012165 AGCD01009497;AGCD01009498;AY533217;GBCB01006025;XM_005376787 AAS59420;XP_005376844 MODEL 8915934 protein-coding Atp23 ATP23 metallopeptidase and ATP synthase assembly factor homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955458 5632679 5650270 + 102003948 AGCD01047515;AGCD01047516;AGCD01047517;AGCD01047518;AGCD01047519;GBCB01041142;GBDJ01389434;XM_013521026 XP_013376480 MODEL 39131773 rrna 5S_rRNA 5S ribosomal RNA 8733083 protein-coding LOC102013855 olfactory receptor 5AK2-like NW_004955511 2146091 2147020 + 102013855 AGCD01066394;XM_005407985 XP_005408042 MODEL 9054170 protein-coding Erp29 endoplasmic reticulum protein 29 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); negative regulation of gene expression (ortholog); negative regulation of protein secretion (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955482 8572227 8579589 + 102006663 AGCD01057536;AGCD01057537;GBDF01045015;XM_005403185;XM_005403186 XP_005403242;XP_005403243 MODEL 8968040 protein-coding Whr1 winged helix repair factor 1 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of Ras protein signal transduction (ortholog); positive regulation of single strand break repair (ortholog); transcription-coupled nucleotide-excision repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955437 485110 492493 + 102006607 AGCD01034137;GBDF01043359;XM_005389405 XP_005389462 MODEL 39131643 rrna 5S_rRNA 5S ribosomal RNA 8832391 protein-coding Cfp complement factor properdin INVOLVED IN complement activation, alternative pathway (ortholog); positive regulation of complement activation, alternative pathway (ortholog); protein stabilization (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); factor VIII deficiency (ortholog); FOUND IN cytoplasmic side of Golgi membrane (ortholog); extracellular region (ortholog); secretory granule (ortholog) NW_004955516 449993 455897 + 102015039 AGCD01067385;GBDJ01230368;XM_013506912;XM_013506913 XP_013362366;XP_013362367 MODEL 8776186 protein-coding LOC102007598 keratin, type II cuticular Hb5-like NW_004955547 2695857 2706205 + 102007598 AGCD01072294;GBDK01062119;XM_005411937 XP_005411994 MODEL 8831740 protein-coding Ap4e1 adaptor related protein complex 4 subunit epsilon 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congenital disorder of glycosylation Ig (ortholog); FOUND IN AP-4 adaptor complex (ortholog) NW_004955409 3476527 3532683 - 102026401 AGCD01009242;AGCD01009243;AGCD01009244;AGCD01009245;GBBH01198101;GBDJ01422441;XM_013510289 XP_013365743 MODEL 8922858 protein-coding Cdc6 cell division cycle 6 ENCODES a protein that exhibits chromatin binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to vasopressin (ortholog); positive regulation of chromosome segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955451 14857174 14871324 + 102011615 AGCD01043578;AGCD01043579;GBDJ01220384;XM_005394353;XM_005394354;XM_013519196;XM_013519197;XM_013519198 XP_005394410;XP_005394411;XP_013374650;XP_013374651;XP_013374652 MODEL 8872281 protein-coding Ccdc167 coiled-coil domain containing 167 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lymphoma (ortholog) NW_004955437 5707236 5720541 + 102018436 AGCD01034397;GBCQ01033283;XM_005389616 XP_005389673 MODEL 8785931 protein-coding Pml PML nuclear body scaffold ENCODES a protein that exhibits cobalt ion binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); apoptotic process (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); PARTICIPATES IN mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 3654854 3692057 - 102020735 AGCD01042439;AGCD01042440;AGCD01042441;GBDJ01009152;XM_013518918;XM_013518919;XM_013518920;XM_013518921;XR_001235868 XP_013374372;XP_013374373;XP_013374374;XP_013374375 MODEL 9036522 protein-coding Lrp2 LDL receptor related protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); calcium ion binding (ortholog); cargo receptor activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); aorta development (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); acute kidney failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955449 5155109 5314886 + 102030138 AGCD01041922;AGCD01041923;AGCD01041924;AGCD01041925;AGCD01041926;GBCQ01000856;XM_013518692 XP_013374146 MODEL 8856463 protein-coding Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); lipid tube assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); glutamatergic synapse (ortholog) NW_004955434 20332727 20381320 + 102022955 AGCD01032615;AGCD01032616;GBCQ01093746;XM_013516394 XP_013371848 MODEL 8779633 protein-coding Arhgap30 Rho GTPase activating protein 30 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog) NW_004955468 12822489 12840705 - 102025108 AGCD01052189;GBCE01034581;XM_005400232;XM_005400233 XP_005400289;XP_005400290 MODEL 8930493 protein-coding LOC102005029 olfactory receptor 51I2-like NW_004955414 21361256 21362200 - 102005029 AGCD01015416;XM_005380085 XP_005380142 MODEL 8753696 protein-coding Abhd10 abhydrolase domain containing 10, depalmitoylase ENCODES a protein that exhibits hydrolase activity, hydrolyzing O-glycosyl compounds (ortholog); mycophenolic acid acyl-glucuronide esterase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN xenobiotic metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955427 12388945 12403703 + 102023721 AGCD01027212;AGCD01027213;GBDK01016264;XM_005386378;XM_013515213 XP_005386435;XP_013370667 MODEL 8976858 protein-coding Adgrl4 adhesion G protein-coupled receptor L4 INVOLVED IN protein-containing complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955423 14395712 14487803 + 102009961 AGCD01023761;GBDK01413276;XM_005385180 XP_005385237 MODEL 8909584 pseudo LOC102011069 multifunctional protein ADE2 pseudogene NW_004955402 52895248 52897277 + 102011069 AGCD01001350 MODEL 8793966 pseudo LOC102008760 ATP-dependent RNA helicase DDX50-like NW_004955519 1840874 1843190 - 102008760 AGCD01067909 MODEL 9033392 pseudo LOC102022575 phosphoglycerate mutase 1-like NW_004955411 32207891 32260701 + 102022575 AGCD01012294;AGCD01012295;AGCD01012296;AGCD01012297;AGCD01012298 MODEL 8945805 ncrna LOC102018513 uncharacterized LOC102018513 NW_004955426 16028415 16032540 + 102018513 AGCD01026457;GBDF01159738;XR_261197 MODEL 8801171 protein-coding Clrn2 clarin 2 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); inner ear auditory receptor cell differentiation (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 117 (ortholog); Hearing Loss (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN stereocilium bundle (ortholog) NW_004955480 6634653 6645499 - 102008943 AGCD01056686;GBCE01141855;GBDF01112364;XM_005402498 XP_005402555 MODEL 8761737 protein-coding Slc48a1 solute carrier family 48 member 1 ENCODES a protein that exhibits heme binding (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN heme export (ortholog); heme export from vacuole to cytoplasm (ortholog); heme metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endolysosome (ortholog); endosome membrane (ortholog) NW_004955500 6675631 6691942 + 102020028 AGCD01063890;AGCD01063891;GBBH01089082;XM_005406620;XM_005406621;XM_005406622 XP_005406677;XP_005406678;XP_005406679 MODEL 9045988 protein-coding LOC102012311 olfactory receptor 480-like NW_004955414 23617985 23618923 - 102012311 AGCD01015506;XM_005380205 XP_005380262 MODEL 8886399 protein-coding LOC102009898 prolactin-like NW_004955576 934768 939343 + 102009898 AGCD01075348;XM_013509612 XP_013365066 MODEL 8933570 pseudo LOC102010306 L-lactate dehydrogenase A chain pseudogene NW_004955437 1653118 1654576 - 102010306 AGCD01034224 MODEL 9016001 pseudo LOC102004309 ESF1 homolog NW_004955432 19133089 19170480 - 102004309 AGCD01031169 MODEL 8892272 protein-coding Brinp2 BMP/retinoic acid inducible neural specific 2 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); locomotion (ortholog); ASSOCIATED WITH oral squamous cell carcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955406 16748824 16840924 + 102018683 AGCD01006000;GBDJ01100677;XM_005374909 XP_005374966 MODEL 8861987 pseudo LOC102003248 60S ribosomal protein L17 pseudogene NW_004955422 7684598 7685166 + 102003248 AGCD01022643;XM_005384099 MODEL 8766878 protein-coding Prpf18 pre-mRNA processing factor 18 INVOLVED IN negative regulation of protein metabolic process (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955429 20581457 20613258 - 102009742 AGCD01028986;GBBH01209489;XM_005387160;XM_013515516 XP_005387217;XP_013370970 MODEL 9007908 protein-coding Cftr CF transmembrane conductance regulator ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP hydrolysis activity (ortholog); bicarbonate transmembrane transporter activity (ortholog); INVOLVED IN amelogenesis (ortholog); bicarbonate transport (ortholog); cellular response to anoxia (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute kidney failure (ortholog); acute pancreatitis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955432 23179645 23328347 + 102016737 AGCD01031282;AGCD01031283;GBBH01149524;XM_005388136;XM_013515961 XP_005388193;XP_013371415 MODEL 8793435 protein-coding Pmm1 phosphomannomutase 1 ENCODES a protein that exhibits phosphomannomutase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955413 27090291 27097088 - 102020552 AGCD01014492;GBDI01127252;XM_005379355 XP_005379412 MODEL 8956245 protein-coding Lrp2bp LRP2 binding protein NW_004955403 23657994 23678042 + 102027369 AGCD01002249;AGCD01002250;GBBH01072551;XM_005373466;XM_005373467;XM_005373468;XR_001233531 XP_005373523;XP_005373524;XP_005373525 MODEL 8774454 protein-coding B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 ENCODES a protein that exhibits (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity (ortholog); acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); ganglioside biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955458 5351924 5361755 - 102008382 AGCD01047480;AGCD01047481;AGCD01047482;AGCD01047483;GBBH01001973;GBDI01009436;XM_005397405 XP_005397462 MODEL 9030338 protein-coding Anapc2 anaphase promoting complex subunit 2 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); negative regulation of gene expression (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); esophageal cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleoplasm (ortholog) NW_004955513 5183472 5194253 - 102004743 AGCD01066961;GBDF01082252;XM_005408582 XP_005408639 MODEL 8813963 protein-coding Immp1l inner mitochondrial membrane peptidase subunit 1 PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955476 9784838 9850076 - 102025906 AGCD01055397;AGCD01055398;AGCD01055399;AGCD01055400;GBCQ01044833;XM_005401775;XM_005401776;XM_005401778;XM_005401779;XM_005401780;XM_013502937 XP_005401832;XP_005401833;XP_005401835;XP_005401836;XP_005401837;XP_013358391 MODEL 9057518 protein-coding Adgrv1 adhesion G protein-coupled receptor V1 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955418 20603323 21039891 - 102025794 AGCD01019240;AGCD01019241;AGCD01019242;AGCD01019243;AGCD01019244;AGCD01019245;AGCD01019246;AGCD01019247;AGCD01019248;AGCD01019249;AGCD01019250;AGCD01019251;AGCD01081641;GBBH01228156;GBCQ01099833;XM_013512957 XP_013368411 MODEL 9062900 pseudo LOC102008354 pre-mRNA-processing factor 17-like NW_004955441 193642 199372 - 102008354 AGCD01036688 MODEL 8894400 protein-coding Rttn rotatin INVOLVED IN determination of left/right symmetry (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); autistic disorder (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955402 53600985 53753218 - 102005430 AGCD01001370;AGCD01001371;GBDF01281354;XM_005373054 XP_005373111 MODEL 8780088 protein-coding LOC102013857 olfactory receptor 5T2-like NW_004955511 1051558 1052376 + 102013857 AGCD01066354;XM_013506421 XP_013361875 MODEL 9033050 protein-coding Cenpe centromere protein E ENCODES a protein that exhibits kinetochore binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); attachment of spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955496 5468759 5514915 + 102012001 AGCD01062355;GBDJ01258207;XM_013505426;XM_013505427;XM_013505428;XM_013505429 XP_013360880;XP_013360881;XP_013360882;XP_013360883 MODEL 8870579 protein-coding LOC102018514 L-xylulose reductase NW_004955506 1135924 1137671 + 102018514 AGCD01065246;GBDK01008359;XM_005407226 XP_005407283 MODEL 9029478 protein-coding Sox8 SRY-box transcription factor 8 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); astrocyte fate commitment (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); esophageal cancer (ortholog); Joubert syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 16236286 16241093 - 102013559 AGCD01037893;GBBH01171342;XM_005391596 XP_005391653 MODEL 8860675 ncrna LOC102007599 uncharacterized LOC102007599 NW_004955556 1440615 1452951 + 102007599 AGCD01073194;GBCE01045813;XR_264977 MODEL 8785571 pseudo LOC102004682 U1 small nuclear ribonucleoprotein C pseudogene NW_004955411 31410189 31410670 - 102004682 AGCD01012272 MODEL 8921636 protein-coding Ccdc169 coiled-coil domain containing 169 NW_004955431 9794294 9852944 + 102030458 AGCD01030194;AGCD01030195;GBDF01006343;XM_005387687;XM_005387688;XM_013515882 XP_005387744;XP_005387745;XP_013371336 MODEL 8996948 protein-coding Ap4m1 adaptor related protein complex 4 subunit mu 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); Golgi to endosome transport (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Ataxia (ortholog); FOUND IN AP-4 adaptor complex (ortholog); early endosome (ortholog); trans-Golgi network (ortholog) NW_004955573 759222 763222 - 102030254 AGCD01075004;GBDI01178585;XM_005413751;XM_013509465 XP_005413808;XP_013364919 MODEL 39133987 misc_rna 7SK 7SK RNA 9025073 protein-coding Cab39 calcium binding protein 39 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase activator activity (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN response to activity (ortholog); response to thyroid hormone (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); hyperthyroidism (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog); serine/threonine protein kinase complex (ortholog) NW_004955453 4582530 4670978 - 102026711 AGCD01044692;AGCD01044693;AGCD01044694;AGCD01044695;GBDF01010077;XM_005395412;XM_005395413;XM_005395414 XP_005395469;XP_005395470;XP_005395471 MODEL 39134124 misc_rna 7SK 7SK RNA 8834059 protein-coding Rep15 RAB15 effector protein INVOLVED IN receptor recycling (ortholog); transferrin transport (ortholog); FOUND IN early endosome membrane (ortholog); endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955505 7189592 7190928 - 102021262 AGCD01065201;GBDJ01171786;XM_005407162 XP_005407219 MODEL 9065969 protein-coding Brinp3 BMP/retinoic acid inducible neural specific 3 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); exploration behavior (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); cerebral infarction (ortholog); Chronic Periodontitis (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955406 27870115 28240328 - 102015074 AGCD01006290;AGCD01006291;AGCD01006292;AGCD01006293;AGCD01006294;AGCD01006295;GBDF01307752;XM_005375093;XM_005375094;XM_005375095 XP_005375150;XP_005375151;XP_005375152 MODEL 8843669 trna trnL2 tRNA-Leu MT 2643 2718 + 15822217 8911148 pseudo LOC102006101 serine incorporator 3-like NW_004955459 2481300 2493364 - 102006101 AGCD01047991 MODEL 39131936 rrna 5S_rRNA 5S ribosomal RNA 8979037 protein-coding Actb actin beta ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); apical protein localization (ortholog); axonogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; INO80 family mediated chromatin remodeling pathway; mitochondria transport pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical junction complex (ortholog) NW_004955460 10358100 10361585 - 102030392 AGCD01048580;AGCD01048581;DQ826531;GBDJ01017709;XM_005397842 ABI22175;XP_005397899 MODEL 8814462 protein-coding Clrn3 clarin 3 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog) NW_004955477 5663188 5676430 - 102014560 AGCD01055598;GBCQ01010623;XM_005402012 XP_005402069 MODEL 8791802 ncrna LOC102009902 uncharacterized LOC102009902 NW_004956152 10489 11424 - 102009902 AGCD01079147;GBBH01228485;XR_265206 MODEL 8864638 pseudo LOC102004312 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 pseudogene NW_004955434 9625813 9626382 - 102004312 AGCD01032306 MODEL 8962639 protein-coding Whrn whirlin ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cerebellar Purkinje cell layer formation (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH asthma (ortholog); autosomal recessive nonsyndromic deafness 31 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin filament (ortholog); apical dendrite (ortholog); axon collateral (ortholog) NW_004955419 13116001 13207266 + 102010486 AGCD01019996;AGCD01019997;GBDK01284958;XM_005382629;XM_005382630;XM_005382631;XM_005382633;XM_013513190;XM_013513191 XP_005382686;XP_005382687;XP_005382688;XP_005382690;XP_013368644;XP_013368645 MODEL 9036121 ncrna LOC102013522 uncharacterized LOC102013522 NW_004955426 6475719 6492062 - 102013522 AGCD01026157;GBDF01145587;XR_261192 MODEL 8979912 protein-coding Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); calcium-dependent ATPase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alcohol Myopathy (ortholog); anxiety disorder (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); H zone (ortholog); I band (ortholog) NW_004955493 6559995 6578461 - 102013308 AGCD01061119;GBCB01099818;XM_005405160 XP_005405217 MODEL 8794673 protein-coding LOC102011927 uncharacterized LOC102011927 NW_004955450 3259515 3262466 + 102011927 AGCD01042426;GBDF01042694;XM_005393550 XP_005393607 MODEL 8791005 protein-coding LOC102005030 olfactory receptor 226 ENCODES a protein that exhibits G protein-coupled olfactory receptor activity (ortholog); G protein-coupled receptor activity (ortholog); olfactory receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN plasma membrane (ortholog) NW_004955414 22706291 22707274 - 102005030 AGCD01015472;XM_005380180 XP_005380237 MODEL 8723280 protein-coding LOC102007210 NKG2-D type II integral membrane protein NW_004955413 7623358 7639703 - 102007210 AGCD01013827;GBDI01345487;XM_005378934 XP_005378991 MODEL 8919194 protein-coding Abhd11 abhydrolase domain containing 11 ENCODES a protein that exhibits lipase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) NW_004955456 14019073 14021536 + 102023004 AGCD01046631;GBDK01009837;XM_005396765 XP_005396822 MODEL 8950895 protein-coding Arhgap31 Rho GTPase activating protein 31 ENCODES a protein that exhibits GTPase activator activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 1 (ortholog); autistic disorder (ortholog); FOUND IN lamellipodium (ortholog) NW_004955427 19019008 19136298 + 102017479 AGCD01027358;AGCD01027359;GBDK01236183;XM_005386441;XM_005386442 XP_005386498;XP_005386499 MODEL 9054203 ncrna LOC102008766 uncharacterized LOC102008766 NW_004955435 5849029 5853706 - 102008766 AGCD01032901;AGCD01032902;GBDF01188936;XR_261666 MODEL 8963331 protein-coding LOC102011070 vomeronasal type-1 receptor 4-like NW_004955603 546797 561763 + 102011070 AGCD01076853;AGCD01076854;AGCD01076855;XM_005414848 XP_005414905 MODEL 8757923 protein-coding Ccdc17 coiled-coil domain containing 17 ASSOCIATED WITH cervical cancer (ortholog); colorectal adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog) NW_004955464 12661440 12667388 + 102027389 AGCD01050214;GBDJ01002886;XM_013521581 XP_013377035 MODEL 8916360 protein-coding LOC102022578 heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like NW_004955467 3848579 3956203 + 102022578 AGCD01051347;AGCD01051348;AGCD01051349;AGCD01051350;AGCD01051351;AGCD01051352;AGCD01051353;AGCD01051354;GBBH01213909;GBCQ01153185;XM_013522023 XP_013377477 MODEL 8931945 protein-coding Dad1 defender against cell death 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN blastocyst development (ortholog); glycoprotein biosynthetic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN oligosaccharyltransferase complex (ortholog); oligosaccharyltransferase complex A (ortholog); oligosaccharyltransferase complex B (ortholog) NW_004955409 37670266 37688226 + 102008385 AGCD01010533;GBDF01006584;XM_005377131;XM_013510454 XP_005377188;XP_013365908 MODEL 8817338 ncrna LOC102012320 uncharacterized LOC102012320 NW_004955416 18878338 18879499 - 102012320 AGCD01017411;GBDF01086604;XR_260394 MODEL 8711879 protein-coding Slc49a3 solute carrier family 49 member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955514 289301 295443 - 102007146 AGCD01067006;GBDJ01187158;XM_005408673;XM_013506845;XM_013506846;XR_001231781 XP_005408730;XP_013362299;XP_013362300 MODEL 8831437 protein-coding Erp44 endoplasmic reticulum protein 44 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); protein folding (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955419 25584404 25665590 + 102013936 AGCD01020388;AGCD01020389;GBCQ01063714;XM_005382816 XP_005382873 MODEL 8955917 protein-coding Flot1 flotillin 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); caveola assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955583 717246 729924 - 102018347 AGCD01075855;AGCD01075856;AGCD01075857;GBDJ01001358;GBDK01004420;XM_005414316 XP_005414373 MODEL 39131644 rrna 5S_rRNA 5S ribosomal RNA 8824938 protein-coding Ak5 adenylate kinase 5 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955423 15587233 15796314 - 102020929 AGCD01023811;AGCD01023812;AGCD01023813;GBDF01114509;GBDJ01355615;XM_005385219 XP_005385276 MODEL 8728965 pseudo LOC102010310 eukaryotic translation initiation factor 3 subunit F-like NW_004955441 1151626 1157056 - 102010310 AGCD01036747 MODEL 8712595 pseudo LOC102008356 kinetochore-associated protein DSN1 homolog pseudogene NW_004955444 350531 351610 - 102008356 AGCD01038664;XM_005392056 MODEL 8814445 ncrna LOC102013858 uncharacterized LOC102013858 NW_004955513 4433883 4437916 - 102013858 AGCD01066927;GBDF01088196;XR_264478;XR_264479 MODEL 8803725 ncrna LOC102018521 uncharacterized LOC102018521 NW_004955515 3179303 3190163 + 102018521 AGCD01067274;GBDI01275277;XR_264522;XR_264523 MODEL 8893043 protein-coding Cenpf centromere protein F ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); dynein complex binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chromosome segregation (ortholog); kidney development (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); chromosome, centromeric region (ortholog) NW_004955406 3225788 3273037 - 102011835 AGCD01005669;GBDF01121464;XM_005374718 XP_005374775 MODEL 8755936 protein-coding Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of clathrin-dependent endocytosis (ortholog); positive regulation of neuron differentiation (ortholog); regulation of clathrin-dependent endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955416 13151288 13297878 - 102030075 AGCD01017219;AGCD01017220;AGCD01017221;GBDF01002482;XM_005381462;XM_013512668;XM_013512669;XM_013512670 XP_005381519;XP_013368122;XP_013368123;XP_013368124 MODEL 8774829 protein-coding Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); ethanol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); behavioral response to ethanol (ortholog); ethanol catabolic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Binge Drinking (ortholog); FOUND IN cytosol (ortholog) NW_004955496 8136279 8149496 + 102026021 AGCD01062390;GBCQ01011154;XM_005406277 XP_005406334 MODEL 8833996 protein-coding Sox9 SRY-box transcription factor 9 ENCODES a protein that exhibits beta-catenin binding (ortholog); bHLH transcription factor binding (ortholog); chromatin binding (ortholog); INVOLVED IN anterior head development (ortholog); aortic valve morphogenesis (ortholog); astrocyte fate commitment (ortholog); ASSOCIATED WITH 46,XX sex reversal 2 (ortholog); 46,XY sex reversal 10 (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955478 941684 945563 - 102020005 AGCD01055751;GBDJ01031941;XM_005402098 XP_005402155 MODEL 9052463 protein-coding LOC102003250 transient receptor potential cation channel subfamily V member 5 NW_004955494 693654 721271 + 102003250 AGCD01061383;GBDF01039033;XM_005405380;XM_013504911 XP_005405437;XP_013360365 MODEL 8883542 protein-coding Prpf19 pre-mRNA processing factor 19 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); double-strand break repair via nonhomologous end joining (ortholog); inner cell mass cell proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); DNA replication factor A complex (ortholog) NW_004955511 5546212 5552368 - 102003266 AGCD01066568;GBDF01006561;GBDI01004319;XM_005408116 XP_005408173 MODEL 8701226 protein-coding LOC102014248 olfactory receptor 6F1-like NW_004955418 30394643 30395602 + 102014248 AGCD01019515;XM_005382375 XP_005382432 MODEL 39131774 rrna 5S_rRNA 5S ribosomal RNA 9011401 protein-coding Cga glycoprotein hormones, alpha polypeptide ENCODES a protein that exhibits follicle-stimulating hormone activity (ortholog); hormone activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); developmental growth (ortholog); follicle-stimulating hormone secretion (ortholog); PARTICIPATES IN follicle-stimulating hormone signaling pathway; luteinizing hormone signaling pathway; ASSOCIATED WITH adrenal gland disease (ortholog); atrial fibrillation (ortholog); breast cancer (ortholog); FOUND IN extracellular region (ortholog); follicle-stimulating hormone complex (ortholog); pituitary gonadotropin complex (ortholog) NW_004955411 14092743 14168297 - 102023341 AGCD01011908;AGCD01011909;GBDF01173117;XM_005377714 XP_005377771 MODEL 8854654 protein-coding Pmm2 phosphomannomutase 2 ENCODES a protein that exhibits phosphomannomutase activity (ortholog); INVOLVED IN GDP-mannose biosynthetic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); anemia (ortholog); Ataxia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955442 9390789 9411722 - 102016753 AGCD01037679;GBBH01090482;XM_005391214;XM_005391216;XM_005391217 XP_005391271;XP_005391273;XP_005391274 MODEL 8907210 protein-coding Repin1 replication initiator 1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); regulation of fatty acid transport (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); lipid droplet (ortholog) NW_004955491 4973192 4977970 + 102018610 AGCD01060466;GBDF01002881;XM_005404768;XM_005404772;XM_005404774;XM_013504594 XP_005404825;XP_005404829;XP_005404831;XP_013360048 MODEL 8788822 protein-coding B4galnt2 beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group) ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); N-acetylneuraminylgalactosylglucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of cell-cell adhesion (ortholog); protein import (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) NW_004955451 12260885 12281301 - 102028047 AGCD01043382;AGCD01043383;AGCD01043384;GBDK01078472;XM_005394221 XP_005394278 MODEL 8782861 protein-coding Immp2l inner mitochondrial membrane peptidase subunit 2 ENCODES a protein that exhibits peptidase activity (ortholog); signal peptidase activity (ortholog); INVOLVED IN blood circulation (ortholog); brain development (ortholog); cerebellum vasculature development (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH autistic disorder (ortholog); diffuse large B-cell lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane peptidase complex (ortholog); mitochondrion (ortholog) NW_004955410 14567787 15420025 - 102014333 AGCD01010910;AGCD01010911;AGCD01010912;AGCD01010913;AGCD01010914;AGCD01010915;AGCD01010916;AGCD01010917;AGCD01010918;AGCD01010919;AGCD01010920;AGCD01010921;AGCD01010922;AGCD01010923;AGCD01010924;AGCD01010925;AGCD01010926;GBCQ01071840;XM_005377314 XP_005377371 MODEL 8726338 protein-coding Anapc4 anaphase promoting complex subunit 4 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) NW_004955443 19620480 19653179 - 102021287 AGCD01038631;GBBH01141916;XM_005392036;XM_005392037 XP_005392093;XP_005392094 MODEL 8728890 protein-coding LOC102009120 leukocyte-associated immunoglobulin-like receptor 1 NW_004955567 1481960 1491331 - 102009120 AGCD01074476;GBBH01229034;XM_013509284;XM_013509285;XM_013509286;XM_013509287;XM_013509288 XP_013364738;XP_013364739;XP_013364740;XP_013364741;XP_013364742 MODEL 8774510 pseudo LOC102009903 probable U3 small nucleolar RNA-associated protein 11 pseudogene NW_004957626 626 1246 + 102009903 AGCD01081022 MODEL 8719603 protein-coding Cdc7 cell division cycle 7 ENCODES a protein that exhibits kinase activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cell cycle phase transition (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Dbf4-dependent protein kinase complex (ortholog); intercellular bridge (ortholog) NW_004955423 2902352 2923743 - 102027995 AGCD01023492;AGCD01023493;GBCE01072842;XM_005385064;XM_005385065 XP_005385121;XP_005385122 MODEL 8955311 protein-coding Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); disulfide oxidoreductase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); protein folding in endoplasmic reticulum (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955403 14681015 14717060 - 102016545 AGCD01002029;GBCQ01063275;XM_005373345 XP_005373402 MODEL 9038780 protein-coding Rubcn rubicon autophagy regulator ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of autophagosome maturation (ortholog); negative regulation of autophagy (ortholog); negative regulation of endocytosis (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 15 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) NW_004955420 12124193 12187154 + 102029749 AGCD01020855;AGCD01020856;AGCD01020857;GBDF01120735;XM_005383093;XM_005383094;XM_005383095 XP_005383150;XP_005383151;XP_005383152 MODEL 8894372 protein-coding LOC102004314 vomeronasal type-2 receptor 116-like NW_004955524 1994507 2020685 + 102004314 AGCD01068790;AGCD01068791;AGCD01068792;XM_013507192 XP_013362646 MODEL 8908823 protein-coding LOC102004683 uncharacterized LOC102004683 NW_004955464 12780991 12785037 + 102004683 AGCD01050228;GBDF01008922;XM_013521579 XP_013377033 MODEL 39133988 misc_rna 7SK 7SK RNA 8842986 protein-coding LOC102007211 60S ribosomal protein L9-like NW_004955468 1922431 1924783 + 102007211 AGCD01051787;GBDF01014892;XM_005399914 XP_005399971 MODEL 39134125 misc_rna 7SK 7SK RNA 8799638 trna trnM(cat) tRNA-Met MT 3818 3886 + 15822219 8792700 protein-coding Cab39l calcium binding protein 39 like ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955431 2781714 2899857 - 102022840 AGCD01029939;AGCD01029940;AGCD01029941;AGCD01029942;GBDJ01131213;XM_005387582;XM_005387583;XM_005387584;XM_005387585;XM_005387588;XM_005387589 XP_005387639;XP_005387640;XP_005387641;XP_005387642;XP_005387645;XP_005387646 MODEL 8941536 ncrna LOC102006108 uncharacterized LOC102006108 NW_004955411 31891671 31897535 - 102006108 AGCD01012289;GBDK01379399;XR_001232822;XR_001232823 MODEL 8843061 protein-coding Brip1 BRCA1 interacting DNA helicase 1 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); chromatin binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to hypoxia (ortholog); cellular response to vitamin (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN BRCA1-B complex (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) NW_004955451 2705834 2820610 - 102010854 AGCD01043022;AGCD01043023;GBDK01359826;XM_013519414 XP_013374868 MODEL 8751547 protein-coding Ccdc170 coiled-coil domain containing 170 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Estrogen Resistance (ortholog); FOUND IN ciliary basal body (ortholog); Golgi apparatus (ortholog) NW_004955439 10010421 10114323 - 102029329 AGCD01035848;AGCD01035849;AGCD01035850;AGCD01035851;AGCD01035852;AGCD01035853;AGCD01035854;AGCD01035855;AGCD01035856;GBDI01169107;XM_005390576;XM_005390577;XM_013517399;XM_013517400 XP_005390633;XP_005390634;XP_013372853;XP_013372854 MODEL 8939467 protein-coding Actbl2 actin beta like 2 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) NW_004955446 10508647 10509777 + 102010645 AGCD01040183;XM_005392677;XM_005392678 XP_005392734;XP_005392735 MODEL 8728125 protein-coding LOC102007601 kallikrein-4-like NW_004955558 1612493 1615729 + 102007601 AGCD01073453;XM_005412748 XP_005412805 MODEL 9000429 protein-coding Ak6 adenylate kinase 6 ENCODES a protein that exhibits AMP kinase activity (ortholog); FOUND IN Cajal body (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955575 61082 78415 - 102022240 AGCD01075200;AGCD01075201;GBCB01023039;XM_005413912 XP_005413969 MODEL 8998850 pseudo LOC102013523 heat shock protein HSP 90-alpha pseudogene NW_004955426 26341646 26343835 - 102013523 AGCD01026756 MODEL 8958675 ncrna LOC102018523 uncharacterized LOC102018523 NW_004955434 172998 207712 + 102018523 AGCD01031998;AGCD01031999;AGCD01032000;GBCQ01181420;XR_001234825;XR_001234826;XR_261605 MODEL 8977655 protein-coding LOC102013859 zinc finger protein 709-like NW_004955432 4110745 4145337 - 102013859 AGCD01030693;AGCD01030694;AGCD01030695;AGCD01030696;GBDF01011095;XM_013515924 XP_013371378 MODEL 9016101 pseudo LOC102011930 tripartite motif-containing protein 59-like NW_004955450 13491725 13492879 - 102011930 AGCD01042735 MODEL 9029822 protein-coding Wif1 WNT inhibitory factor 1 INVOLVED IN positive regulation of fat cell differentiation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH breast cancer (ortholog); Colorectal Neoplasms (ortholog); Endometrioid Carcinomas (ortholog) NW_004955458 11755147 11834047 - 102009152 AGCD01047759;AGCD01047760;GBBH01163275;GBCE01002151;XM_013521009 XP_013376463 MODEL 8893361 protein-coding Lrp3 LDL receptor related protein 3 INVOLVED IN negative regulation of fat cell differentiation (ortholog); negative regulation of gene expression (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog) NW_004955468 2957156 2967678 + 102026624 AGCD01051849;GBCE01118149;GBDJ01017389;XM_013522476 XP_013377930 MODEL 8920508 protein-coding Arhgap32 Rho GTPase activating protein 32 INVOLVED IN cerebellum development (ortholog); positive regulation of axon extension (ortholog); positive regulation of neuron migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); cell cortex (ortholog); cytosol (ortholog) NW_004955412 29910395 30113959 - 102016251 AGCD01013287;AGCD01013288;GBDF01041198;XM_005378544;XM_005378546;XM_013511093;XM_013511094 XP_005378601;XP_005378603;XP_013366547;XP_013366548 MODEL 8812703 protein-coding LOC102011071 PRAME family member 8-like NW_004955618 112533 125114 - 102011071 AGCD01077296;AGCD01077297;GBDF01153091;XM_005415002 XP_005415059 MODEL 39131950 rrna 5S_rRNA 5S ribosomal RNA 9006576 pseudo LOC102022585 N-alpha-acetyltransferase 50 pseudogene NW_004955468 4644545 4645075 + 102022585 AGCD01051919 MODEL 8860411 protein-coding Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); aldehyde oxidase activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN ethanol catabolic process (ortholog); ethanol metabolic process (ortholog); fatty acid omega-oxidation (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Laryngeal Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955496 8065943 8100878 + 102025025 AGCD01062388;GBBH01150230;XM_005406273;XM_005406274;XM_013505402;XM_013505404;XM_013505405 XP_005406330;XP_005406331;XP_013360856;XP_013360858;XP_013360859 MODEL 9003969 protein-coding LOC102012322 galectin-5-like NW_004955481 5560268 5566976 - 102012322 AGCD01056994;AGCD01056995;GBDK01183989;XM_005402780 XP_005402837 MODEL 9001933 protein-coding Clspn claspin ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); DNA secondary structure binding (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA replication checkpoint signaling (ortholog); mitotic DNA replication checkpoint signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 13801073 13842387 - 102022561 AGCD01044435;AGCD01044436;AGCD01044437;GBDI01166470;XM_013519608;XM_013519609 XP_013375062;XP_013375063 MODEL 9029629 protein-coding Slc49a4 solute carrier family 49 member 4 INVOLVED IN pyridoxine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955427 22005161 22093700 + 102025270 AGCD01027464;GBBH01172313;GBCB01007670;XM_005386622 XP_005386679 MODEL 8836628 protein-coding Errfi1 ERBB receptor feedback inhibitor 1 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN apoptotic process (ortholog); bile acid biosynthetic process (ortholog); cartilage development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955486 4941143 4955693 + 102030200 AGCD01059072;AGCD01059073;GBCE01052630;XM_005404060 XP_005404117 MODEL 39131645 rrna 5S_rRNA 5S ribosomal RNA 8796740 pseudo LOC102010312 transcription and mRNA export factor ENY2 pseudogene NW_004955553 1476433 1476725 - 102010312 AGCD01072886 MODEL 8786200 protein-coding LOC102009121 zinc finger protein 345-like NW_004955569 1713912 1862497 + 102009121 AGCD01074678;AGCD01074679;AGCD01074680;AGCD01074681;AGCD01074682;AGCD01074683;AGCD01074684;AGCD01074685;AGCD01074686;AGCD01074687;AGCD01074688;AGCD01074689;AGCD01074690;AGCD01074691;AGCD01074692;XM_013509366 XP_013364820 MODEL 8932406 protein-coding Reps1 RALBP1 associated Eps domain containing 1 ENCODES a protein that exhibits SH3 domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN clathrin-coated pit (ortholog); plasma membrane (ortholog) NW_004955436 20677676 20752842 + 102014485 AGCD01034035;AGCD01034036;AGCD01034037;AGCD01034038;GBBH01164522;GBBH01164524;XM_005389265;XM_005389266 XP_005389322;XP_005389323 MODEL 8989914 pseudo LOC102008359 erythrocyte band 7 integral membrane protein pseudogene NW_004955572 890630 891453 - 102008359 AGCD01074927 MODEL 8782246 protein-coding Anapc5 anaphase promoting complex subunit 5 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog); spindle (ortholog) NW_004955482 6951496 6980498 + 102017573 AGCD01057433;GBDF01011272;XM_005403131;XM_005403132 XP_005403188;XP_005403189 MODEL 9055077 protein-coding Ap4s1 adaptor related protein complex 4 subunit sigma 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN AP-4 adaptor complex (ortholog) NW_004955409 29482820 29530691 - 102014651 AGCD01010268;AGCD01010269;AGCD01010270;AGCD01010271;AGCD01010272;AGCD01010273;AGCD01010274;AGCD01010275;AGCD01010276;GBBH01057360;GBCB01041496;XM_013510385 XP_013365839 MODEL 9001383 protein-coding LOC102005031 sulfotransferase 1C1-like NW_004955470 11811445 11825101 - 102005031 AGCD01052900;AGCD01052901;GBBH01222010;GBDJ01271388;XM_013522679 XP_013378133 MODEL 8799698 protein-coding Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel regulator activity (ortholog); calcium ion binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome membrane docking (ortholog); calcium ion import into sarcoplasmic reticulum (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acrokeratosis verruciformis (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN apical ectoplasmic specialization (ortholog); calcium ion-transporting ATPase complex (ortholog); endoplasmic reticulum (ortholog) NW_004955482 7233336 7295754 + 102004070 AGCD01057449;AGCD01057450;AGCD01057451;AGCD01057452;GBCB01043523;GBDK01076268;XM_013503694;XR_001230987 XP_013359148 MODEL 8940113 pseudo LOC102008769 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955536 609566 611847 + 102008769 AGCD01070732 MODEL 8898445 protein-coding Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 ENCODES a protein that exhibits fatty acid binding (ortholog); identical protein binding (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN 'de novo' post-translational protein folding (ortholog); autophagic cell death (ortholog); cellular response to amino acid starvation (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955423 7393186 7414199 - 102020135 AGCD01023599;GBCB01019971;GBDF01006186;XM_013514504;XM_013514505;XM_013514506;XM_013514507 XP_013369958;XP_013369959;XP_013369960;XP_013369961 MODEL 9025758 protein-coding Rubcnl rubicon like autophagy enhancer ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagosome-endosome fusion (ortholog); autophagosome-lysosome fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN autophagosome membrane (ortholog) NW_004955431 140999 206570 - 102010828 AGCD01029856;AGCD01029857;AGCD01029858;AGCD01029859;GBDJ01387854;XM_005387542;XM_005387544;XM_005387545;XM_013515872;XM_013515873;XM_013515874;XM_013515875 XP_005387599;XP_005387601;XP_005387602;XP_013371326;XP_013371327;XP_013371328;XP_013371329 MODEL 8894736 protein-coding LOC102014254 uncharacterized LOC102014254 NW_004955420 29515927 29530159 + 102014254 AGCD01021509;GBDJ01291266;XM_013513574;XR_001233782;XR_001233783;XR_001233784;XR_001233785;XR_001233786;XR_001233787 XP_013369028 MODEL 39133989 misc_rna 7SK 7SK RNA 8854816 protein-coding Sp1 Sp1 transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to insulin stimulus (ortholog); cellular response to wortmannin (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Carotid Artery Injuries (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) NW_004955458 644435 677360 + 102020425 AGCD01047144;AGCD01047145;AGCD01047146;AGCD01047147;GBCE01004928;XM_005397176;XM_013520955;XM_013520956 XP_005397233;XP_013376409;XP_013376410 MODEL 8716819 protein-coding Prpf3 pre-mRNA processing factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 429259 455449 - 102015301 AGCD01013465;AGCD01013466;AGCD01013467;AGCD01013468;GBDK01133619;XM_005378686;XM_005378687;XR_001232982 XP_005378743;XP_005378744 MODEL 9050400 protein-coding Cgas cyclic GMP-AMP synthase ENCODES a protein that exhibits 2',3'-cyclic GMP-AMP synthase activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955493 8593104 8607297 - 102009194 AGCD01061315;GBBH01048234;GBCE01080276;XM_005405328 XP_005405385 MODEL 8738170 protein-coding Cabcoco1 ciliary associated calcium binding coiled-coil 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN sperm flagellum assembly (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Hepatomegaly (ortholog); sarcoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) NW_004955425 15007833 15115084 + 102018510 AGCD01025574;GBDF01089420;XM_005385945 XP_005386002 MODEL 8868002 protein-coding Dag1 dystroglycan 1 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); dystroglycan binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); axon regeneration (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2P (ortholog); bronchopulmonary dysplasia (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955532 1446553 1465310 + 102014285 AGCD01070188;AGCD01070189;GBBH01117057;GBDK01089592;XM_005410205 XP_005410262 MODEL 8936534 protein-coding Pmp22 peripheral myelin protein 22 ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adult locomotory behavior (ortholog); adult walking behavior (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); aspiration pneumonia (ortholog); astigmatism (ortholog); FOUND IN bicellular tight junction (ortholog); cell surface (ortholog); compact myelin (ortholog) NW_004955467 2422181 2456925 + 102021226 AGCD01051310;GBBH01065423;XM_005399333;XM_005399334 XP_005399390;XP_005399391 MODEL 8896121 protein-coding B4galnt3 beta-1,4-N-acetyl-galactosaminyltransferase 3 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955454 6583405 6603715 - 102028158 AGCD01045250;AGCD01045251;AGCD01045252;GBBH01011317;GBDK01183447;XM_013520228 XP_013375682 MODEL 8724846 protein-coding Flot2 flotillin 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); negative regulation of amyloid precursor protein catabolic process (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN acrosomal membrane (ortholog); adherens junction (ortholog); apical plasma membrane (ortholog) NW_004955481 4276847 4298523 + 102018287 AGCD01056933;GBBH01061429;XM_005402703;XM_005402704;XM_005402705;XM_005402707;XM_013503420 XP_005402760;XP_005402761;XP_005402762;XP_005402764;XP_013358874 MODEL 8765696 pseudo LOC102009912 KATNB1-like protein 1 pseudogene NW_004955406 13799840 13800569 + 102009912 AGCD01005954 MODEL 8972932 protein-coding Brix1 biogenesis of ribosomes BRX1 FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955426 20042274 20051606 + 102005397 AGCD01026560;GBDF01054030;XM_005386187 XP_005386244 MODEL 8988348 protein-coding Abhd12 abhydrolase domain containing 12, lysophospholipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); adult walking behavior (ortholog); glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); cone dystrophy (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cytoplasm (ortholog); dendrite cytoplasm (ortholog) NW_004955415 31284947 31337703 - 102011199 AGCD01016672;AGCD01016673;AGCD01016674;GBDF01082244;GBDK01081859;XM_013512239 XP_013367693 MODEL 8980401 protein-coding Dnajc11 DnaJ heat shock protein family (Hsp40) member C11 INVOLVED IN cristae formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN MIB complex (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955486 5959083 6011177 + 102024239 AGCD01059096;AGCD01059097;AGCD01059098;AGCD01059099;AGCD01059100;GBDF01121226;XM_013504143 XP_013359597 MODEL 8752181 pseudo LOC102004316 myb/SANT-like DNA-binding domain-containing protein 3 pseudogene NW_004955530 335889 336767 + 102004316 AGCD01069846 MODEL 8730602 protein-coding LOC102003251 olfactory receptor 4C3-like NW_004955422 242830 243737 - 102003251 AGCD01022401;XM_013513877 XP_013369331 MODEL 8810400 ncrna LOC102007602 uncharacterized LOC102007602 NW_004955443 8592132 8720400 + 102007602 AGCD01038329;AGCD01038330;AGCD01038331;AGCD01038332;AGCD01038333;AGCD01038334;GBDI01032702;XR_262196;XR_262197 MODEL 8814864 pseudo LOC102004685 death effector domain-containing protein pseudogene NW_004955467 541544 543081 - 102004685 AGCD01051226 MODEL 39131775 rrna 5S_rRNA 5S ribosomal RNA 8936036 protein-coding Ak7 adenylate kinase 7 ENCODES a protein that exhibits AMP kinase activity (ortholog); CMP kinase activity (ortholog); dCMP kinase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hydrocephalus (ortholog); FOUND IN cytosol (ortholog); sperm principal piece (ortholog) NW_004955438 18178822 18233051 + 102023529 AGCD01035466;AGCD01035467;GBDF01008611;GBDK01130472;XM_005390399 XP_005390456 MODEL 8936224 protein-coding LOC102007212 C-reactive protein NW_004955468 11525824 11527555 - 102007212 AGCD01052134;XM_013522300 XP_013377754 MODEL 8976659 trna trnN(gtt) tRNA-Asn MT 5085 5157 - 15822222 8973084 protein-coding LOC102011936 nuclear pore complex protein Nup50-like NW_004955801 1035 19256 - 102011936 AGCD01078375;GBDK01393605;XM_005415113;XM_013510195;XM_013510196 XP_005415170;XP_013365649;XP_013365650 MODEL 8881813 pseudo LOC102006110 brain mitochondrial carrier protein 1 pseudogene NW_004955411 25443595 25445484 + 102006110 AGCD01012158 MODEL 8938961 protein-coding Immt inner membrane mitochondrial protein INVOLVED IN cristae formation (ortholog); mitochondrial calcium ion homeostasis (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholangiocarcinoma (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955424 1438158 1476552 + 102018941 AGCD01024237;GBDI01082771;XM_005385400;XM_005385402;XM_005385403;XM_005385404;XM_005385405;XM_013514670 XP_005385457;XP_005385459;XP_005385460;XP_005385461;XP_005385462;XP_013370124 MODEL 8998848 pseudo LOC102011081 SH3 domain-binding glutamic acid-rich-like protein pseudogene NW_004955406 24054455 24054920 + 102011081 AGCD01006188 MODEL 8926604 protein-coding Cenph centromere protein H ENCODES a protein that exhibits kinetochore binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) NW_004955446 131703 135873 - 102008676 AGCD01039929;XM_013518420;XR_001235681 XP_013373874 MODEL 8844984 protein-coding LOC102012324 olfactory receptor 14I1-like NW_004955418 30244034 30244983 + 102012324 AGCD01019507;XM_013512881 XP_013368335 MODEL 8967634 protein-coding Ccdc171 coiled-coil domain containing 171 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955434 18401276 18760776 + 102020834 AGCD01032565;AGCD01032566;AGCD01032567;AGCD01032568;AGCD01032569;AGCD01032570;AGCD01032571;AGCD01032572;AGCD01032573;AGCD01032574;AGCD01032575;AGCD01032576;AGCD01032577;AGCD01032578;AGCD01032579;GBDF01127705;GBDF01127709;XM_013516391 XP_013371845 MODEL 8723771 protein-coding Actc1 actin alpha cardiac muscle 1 ENCODES a protein that exhibits ATP binding (ortholog); microfilament motor activity (ortholog); myosin binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); actin-myosin filament sliding (ortholog); actomyosin structure organization (ortholog); ASSOCIATED WITH atrial heart septal defect 5 (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955416 2139541 2144678 - 102028962 AGCD01016849;GBDI01008524;XM_005381179 XP_005381236 MODEL 8705988 ncrna LOC102013862 uncharacterized LOC102013862 NW_004955435 22115074 22120032 + 102013862 AGCD01033491;GBDF01153273;XR_001234904 MODEL 8814550 pseudo LOC102018525 transcription factor BTF3 pseudogene NW_004955435 12032177 12032814 - 102018525 AGCD01033133 MODEL 39134126 misc_rna 7SK 7SK RNA 8921463 protein-coding Wipf1 WAS/WASL interacting protein family member 1 ENCODES a protein that exhibits cytoskeletal adaptor activity (ortholog); protein folding chaperone (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); positive regulation of protein export from nucleus (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog) NW_004955449 760382 831007 + 102021190 AGCD01041772;AGCD01041773;AGCD01041774;GBBH01142069;GBDF01014452;XM_013518745 XP_013374199 MODEL 8719625 protein-coding Ap5b1 adaptor related protein complex 5 subunit beta 1 INVOLVED IN endosomal transport (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); macular degeneration (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog) NW_004955422 19544255 19547212 + 102028981 AGCD01023018;GBCE01085788;GBDK01317435;XM_005384462 XP_005384519 MODEL 39131952 rrna 5S_rRNA 5S ribosomal RNA 39133990 misc_rna 7SK 7SK RNA 8911052 trna trnP(tgg) tRNA-Pro MT 15374 15440 - 15822235 8999737 protein-coding Arhgap33 Rho GTPase activating protein 33 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of dendritic spine morphogenesis (ortholog); regulation of postsynapse assembly (ortholog); response to toxic substance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955468 2769108 2783746 - 102020233 AGCD01051836;AGCD01051837;GBDF01083352;XM_005399960;XM_005399961;XM_005399963 XP_005400017;XP_005400018;XP_005400020 MODEL 8968083 protein-coding Sp100 SP100 nuclear body protein ENCODES a protein that exhibits chromo shadow domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); maintenance of protein location (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Mre11 complex (ortholog); nuclear body (ortholog) NW_004955453 4774739 4856238 - 102008057 AGCD01044698;AGCD01044699;AGCD01044700;GBCE01115892;XM_013519802;XM_013519803;XM_013519804;XM_013519805;XM_013519806;XM_013519807;XM_013519808;XM_013519809 XP_013375256;XP_013375257;XP_013375258;XP_013375259;XP_013375260;XP_013375261;XP_013375262;XP_013375263 MODEL 39131646 rrna 5S_rRNA 5S ribosomal RNA 8857789 protein-coding Adhfe1 alcohol dehydrogenase iron containing 1 ENCODES a protein that exhibits hydroxyacid-oxoacid transhydrogenase activity (ortholog); INVOLVED IN ketone body catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955444 12706404 12745106 - 102017281 AGCD01039078;AGCD01039079;AGCD01039080;AGCD01039081;GBBH01059619;GBBH01208438;XM_005392153 XP_005392210 MODEL 8810238 protein-coding Esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN regulation of DNA replication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955402 10207621 10257363 - 102027027 AGCD01000252;AGCD01000253;AGCD01000254;GBCQ01174846;XM_013520167;XM_013520204;XM_013520246;XR_001236265;XR_001236273;XR_001236282 XP_013375621;XP_013375658;XP_013375700 MODEL 9003816 ncrna LOC102008361 uncharacterized LOC102008361 NW_004955448 3629090 3639590 + 102008361 AGCD01041336;XR_001235764;XR_262459 MODEL 8883002 protein-coding Slc4a1 solute carrier family 4 member 1 (Diego blood group) ENCODES a protein that exhibits actin binding (ortholog); ankyrin binding (ortholog); bicarbonate transmembrane transporter activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); blood coagulation (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH Acidoses (ortholog); Alkalosis (ortholog); anemia (ortholog); FOUND IN ankyrin-1 complex (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955451 17318600 17330943 - 102011722 AGCD01043740;AGCD01043741;GBDF01076823;XM_005394528;XM_005394529;XM_013519370 XP_005394585;XP_005394586;XP_013374824 MODEL 8895643 protein-coding B4galnt4 beta-1,4-N-acetyl-galactosaminyltransferase 4 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955476 11624612 11635317 - 102012641 AGCD01055466;AGCD01055467;GBDI01059942;GBDJ01087029;XM_013502997 XP_013358451 MODEL 9035918 protein-coding Reps2 RALBP1 associated Eps domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955519 1131027 1358313 - 102005076 AGCD01067882;AGCD01067883;AGCD01067884;AGCD01067885;AGCD01067886;AGCD01067887;AGCD01067888;AGCD01067889;GBCE01084254;GBDJ01193078;XM_005409136 XP_005409193 MODEL 8783819 protein-coding Flrt1 fibronectin leucine rich transmembrane protein 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN dendrite development (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); neuron projection extension (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); cytoplasmic vesicle (ortholog) NW_004955422 20944875 20958618 - 102022396 AGCD01023098;GBBH01221857;XM_005384646;XM_005384647;XM_005384648 XP_005384703;XP_005384704;XP_005384705 MODEL 8855045 protein-coding Lrp4 LDL receptor related protein 4 ENCODES a protein that exhibits apolipoprotein binding (ortholog); coreceptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN amyloid-beta clearance by cellular catabolic process (ortholog); dendrite morphogenesis (ortholog); dorsal/ventral pattern formation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cenani-Lenz syndactyly syndrome (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); neuromuscular junction (ortholog) NW_004955422 1191338 1238227 + 102003144 AGCD01022449;AGCD01022450;AGCD01022451;GBDF01290662;GBDJ01313047;XM_013513935 XP_013369389 MODEL 8799990 protein-coding Adi1 acireductone dioxygenase 1 ENCODES a protein that exhibits acireductone dioxygenase (Ni2+-requiring) activity (ortholog); acireductone dioxygenase [iron(II)-requiring] activity (ortholog); oxidoreductase activity (ortholog); INVOLVED IN L-methionine cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 3816428 3822663 + 102018293 AGCD01059294;GBDF01081975;XM_013504345 XP_013359799 MODEL 8747663 ncrna LOC102013863 uncharacterized LOC102013863 NW_004955533 211564 218477 + 102013863 AGCD01070312;GBDK01343357;XR_264736 MODEL 8821590 protein-coding LOC102022587 interleukin-36 beta NW_004955470 1261429 1274387 + 102022587 AGCD01052631;AGCD01052632;AGCD01052633;GBDI01161382;XM_005400590 XP_005400647 MODEL 8793702 pseudo LOC102004689 L-lactate dehydrogenase A chain pseudogene NW_004955414 13639147 13640738 - 102004689 AGCD01015115;XR_260167 MODEL 39131776 rrna 5S_rRNA 5S ribosomal RNA 9020022 protein-coding Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); calcium ion transmembrane transporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport from cytosol to endoplasmic reticulum (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); cervical cancer (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) NW_004955467 12911679 12941322 + 102016039 AGCD01051659;GBBH01031864;GBDK01432511;XM_005399699 XP_005399756 MODEL 8869230 protein-coding Dnajc12 DnaJ heat shock protein family (Hsp40) member C12 ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) NW_004955425 20202264 20236416 - 102029418 AGCD01025720;AGCD01025721;AGCD01025722;GBCQ01121999;XM_005385971;XM_013514902;XM_013514903;XM_013514904;XM_013514905;XM_013514906;XM_013514907;XM_013514908;XR_001234300;XR_001234301 XP_005386028;XP_013370356;XP_013370357;XP_013370358;XP_013370359;XP_013370360;XP_013370361;XP_013370362 MODEL 8907598 pseudo LOC102007214 treacle protein pseudogene NW_004955413 22801161 22804226 + 102007214 AGCD01014317 MODEL 8938572 protein-coding Ak8 adenylate kinase 8 ENCODES a protein that exhibits AMP binding (ortholog); AMP kinase activity (ortholog); CMP kinase activity (ortholog); INVOLVED IN ventricular system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); sperm flagellum (ortholog) NW_004955513 2069187 2185469 - 102029775 AGCD01066868;AGCD01066869;AGCD01066870;GBBH01062292;XM_005408390;XM_013506604;XM_013506605 XP_005408447;XP_013362058;XP_013362059 MODEL 8960607 ncrna LOC102011937 uncharacterized LOC102011937 NW_004955403 40009315 40019121 + 102011937 AGCD01002656;AGCD01002657;GBDF01192639;XR_259230 MODEL 8863502 protein-coding Cggbp1 CGG triplet repeat binding protein 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 5434954 5443713 + 102023002 AGCD01006914;AGCD01006915;GBBH01152254;XM_005375528;XM_005375529;XM_013503658 XP_005375585;XP_005375586;XP_013359112 MODEL 8983252 protein-coding Clstn1 calsyntenin 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); kinesin binding (ortholog); X11-like protein binding (ortholog); INVOLVED IN neurotransmitter receptor transport to postsynaptic membrane (ortholog); regulation of cell growth (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) NW_004955486 3706969 3813858 + 102021672 AGCD01059036;AGCD01059037;AGCD01059038;GBCB01098444;GBDF01048171;XM_013504165 XP_013359619 MODEL 8924479 protein-coding LOC102006112 olfactory receptor 147-like NW_004955412 25143673 25144628 - 102006112 AGCD01013136;XM_005378416 XP_005378473 MODEL 8927963 ncrna LOC102010314 uncharacterized LOC102010314 NW_004955555 108802 119271 + 102010314 AGCD01073024;GBBH01226678;XR_264947;XR_264948 MODEL 8738905 protein-coding LOC102009123 transmembrane protease serine 11E NW_004955447 4505454 4611439 + 102009123 AGCD01040721;AGCD01040722;AGCD01040723;AGCD01040724;AGCD01040725;GBDF01013955;XM_005392824;XM_005392826;XM_013518541 XP_005392881;XP_005392883;XP_013373995 MODEL 8958557 ncrna LOC102013525 uncharacterized LOC102013525 NW_004955505 4680056 4680662 + 102013525 AGCD01065126;GBDF01224478;XR_264309 MODEL 39133991 misc_rna 7SK 7SK RNA 8928631 protein-coding LOC102009913 keratin-associated protein 20-2-like NW_004955407 30225299 30225502 + 102009913 AGCD01007628;XM_005375649 XP_005375706 MODEL 8902344 pseudo LOC102011085 dynein light chain 1, cytoplasmic-like NW_004955407 27230910 27231275 + 102011085 AGCD01007548 MODEL 9061999 ncrna LOC102005032 uncharacterized LOC102005032 NW_004955414 25971218 25973185 - 102005032 AGCD01015636;GBCE01175775;XR_260196 MODEL 8940434 protein-coding Anapc7 anaphase promoting complex subunit 7 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); brain development (ortholog); protein branched polyubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN anaphase-promoting complex (ortholog); heterochromatin (ortholog); intercellular bridge (ortholog) NW_004955482 7302853 7328145 - 102020668 AGCD01057454;AGCD01057455;GBCQ01072880;XM_005403142;XM_013503736 XP_005403199;XP_013359190 MODEL 8845808 protein-coding Abhd12b abhydrolase domain containing 12B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955409 12007471 12036999 - 102017851 AGCD01009530;GBCC01011963;XM_005376804;XM_005376806 XP_005376861;XP_005376863 MODEL 9050824 ncrna LOC102003254 uncharacterized LOC102003254 NW_004955423 19319841 19322762 - 102003254 AGCD01023889;GBDF01056704;XR_260982 MODEL 8837464 protein-coding Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 ENCODES a protein that exhibits acetyltransferase activity (ortholog); L-lysine N6-acetyltransferase activity, acting on acetyl phosphate as donor (ortholog); protein-lysine-acetyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); double-strand break repair (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH breast cancer (ortholog); familial hypercholesterolemia (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome (ortholog) NW_004955403 50306726 50328015 + 102008172 AGCD01002964;AGCD01002965;GBDF01190888;XM_005373754;XM_013514290 XP_005373811;XP_013369744 MODEL 8766182 protein-coding Actg1 actin gamma 1 ENCODES a protein that exhibits identical protein binding (ortholog); profilin binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to type II interferon (ortholog); morphogenesis of a polarized epithelium (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Abdominal Pain (ortholog); Abnormal Reflexes (ortholog); Acute Coronary Syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical junction complex (ortholog) NW_004955506 1546678 1549611 + 102005491 AGCD01065271;GBDI01040603;XM_013506066 XP_013361520 MODEL 8985883 protein-coding Sh3glb2 SH3 domain containing GRB2 like, endophilin B2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955570 1370106 1379405 - 102025738 AGCD01074812;GBCE01028722;GBDJ01007498;XM_013509416;XM_013509417;XM_013509418;XM_013509419;XM_013509420;XM_013509421;XM_013509422;XM_013509423 XP_013364870;XP_013364871;XP_013364872;XP_013364873;XP_013364874;XP_013364875;XP_013364876;XP_013364877 MODEL 8821965 protein-coding Prpf31 pre-mRNA processing factor 31 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ribonucleoprotein complex localization (ortholog); snoRNA localization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; spliceosome pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN Cajal body (ortholog); MLL1 complex (ortholog); nuclear speck (ortholog) NW_004955604 125489 136209 - 102014515 AGCD01076864;GBDF01079967;XM_005414861;XM_005414862;XM_005414863 XP_005414918;XP_005414919;XP_005414920 MODEL 8890021 protein-coding Cdc73 cell division cycle 73 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); endodermal cell fate commitment (ortholog); mRNA 3'-end processing (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); angioedema (ortholog); breast cancer (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 30533919 30665812 + 102021416 AGCD01006375;AGCD01006376;AGCD01006377;AGCD01006378;GBCQ01098672;GBDF01182228;XM_013521863 XP_013377317 MODEL 8744839 protein-coding Dagla diacylglycerol lipase alpha ENCODES a protein that exhibits hydrolase activity (ortholog); monoacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); diacylglycerol catabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN dendrite membrane (ortholog); dendritic spine membrane (ortholog); early endosome membrane (ortholog) NW_004955511 5952134 5997280 - 102011893 AGCD01066594;GBDK01117691;XM_005408144;XM_013506495 XP_005408201;XP_013361949 MODEL 9013956 protein-coding Pmpca peptidase, mitochondrial processing subunit alpha ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN mitochondrial protein processing (ortholog); protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH Abnormal Reflexes (ortholog); autosomal recessive spinocerebellar ataxia 2 (ortholog); blindness (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial processing peptidase complex (ortholog) NW_004955513 4315159 4322609 - 102006379 AGCD01066925;GBDF01081940;XM_005408489;XM_013506655 XP_005408546;XP_013362109 MODEL 8836264 pseudo LOC102012334 60S ribosomal protein L21 pseudogene NW_004955422 13359228 13359730 + 102012334 AGCD01022822;XM_005384951 MODEL 8796085 ncrna LOC102008772 uncharacterized LOC102008772 NW_004955442 14332729 14334118 - 102008772 AGCD01037810;GBBH01025947;XR_001235407 MODEL 8782579 protein-coding Arhgap35 Rho GTPase activating protein 35 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); GTPase activator activity (ortholog); phospholipid binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); camera-type eye development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Anophthalmia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955574 915604 984744 + 102003394 AGCD01075140;GBCQ01066224;GBDF01002385;XM_013509560 XP_013365014 MODEL 10108911 protein-coding Trnp1 TMF1 regulated nuclear protein 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); neural precursor cell proliferation (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN euchromatin (ortholog); nucleus (ortholog) NW_004955452 6335463 6341657 + 106149755 AGCD01044105;AGCD01044106;GBBH01186332;GBDF01207830;XM_013519741 XP_013375195 MODEL 39131647 rrna 5S_rRNA 5S ribosomal RNA 8707882 protein-coding LOC102011087 olfactory receptor 9K2-like NW_004955458 2223510 2224451 + 102011087 AGCD01047218;XM_005397237 XP_005397294 MODEL 8779222 protein-coding LOC102014255 3-ketoacyl-CoA thiolase B, peroxisomal-like NW_004955421 4985856 4998119 - 102014255 AGCD01021709;AGCD01021710;GBCQ01008989;XM_005383729 XP_005383786 MODEL 8825329 protein-coding Rufy1 RUN and FYVE domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); SH2 domain binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endosomal vesicle fusion (ortholog); protein transport (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome membrane (ortholog) NW_004955408 946842 991717 - 102005110 AGCD01007944;AGCD01007945;GBCQ01003838;GBDJ01073789;XM_013507916 XP_013363370 MODEL 9001189 protein-coding Ap5m1 adaptor related protein complex 5 subunit mu 1 INVOLVED IN endosomal transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog); cytosol (ortholog); late endosome (ortholog) NW_004955466 11191511 11216274 + 102025777 AGCD01051085;GBDF01225513;XM_005399202 XP_005399259 MODEL 8764986 protein-coding Wipf2 WAS/WASL interacting protein family member 2 ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955451 14821924 14856304 + 102011269 AGCD01043575;AGCD01043576;AGCD01043577;AGCD01043578;GBDI01020357;XM_005394352 XP_005394409 MODEL 8866276 protein-coding Cabin1 calcineurin binding protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein phosphatase 2B binding (ortholog); INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); negative regulation of apoptotic process (ortholog); response to activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN HIR complex (ortholog); nucleoplasm (ortholog) NW_004955455 8162365 8312932 - 102007854 AGCD01045881;AGCD01045882;AGCD01045883;AGCD01045884;AGCD01045885;AGCD01045886;GBBH01092386;XM_013520395;XM_013520396;XM_013520398;XM_013520399;XM_013520400;XM_013520401 XP_013375849;XP_013375850;XP_013375852;XP_013375853;XP_013375854;XP_013375855 MODEL 8820897 pseudo LOC102004690 glucocorticoid modulatory element-binding protein 1 pseudogene NW_004955469 10849261 10850647 + 102004690 AGCD01052551 MODEL 8707172 pseudo LOC102007219 tRNA methyltransferase 10 homolog B pseudogene NW_004955472 2140534 2143118 - 102007219 AGCD01053437 MODEL 8804211 protein-coding Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); calcium ion transmembrane transporter activity (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion export across plasma membrane (ortholog); cellular response to corticosterone stimulus (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955405 26872379 26932270 - 102015279 AGCD01005205;GBBH01050604;XM_005374438;XM_005374440;XM_005374444;XM_013518195 XP_005374495;XP_005374497;XP_005374501;XP_013373649 MODEL 8893065 ncrna LOC102011940 uncharacterized LOC102011940 NW_004955403 54668718 54673281 + 102011940 AGCD01003101;GBDF01280593;XR_001234182;XR_001234183 MODEL 8705437 protein-coding Cdca2 cell division cycle associated 2 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog) NW_004955403 48374276 48417130 + 102023316 AGCD01002918;AGCD01002919;AGCD01002920;GBDF01004693;XM_005373713;XM_005373714;XM_005373715;XM_013514099 XP_005373770;XP_005373771;XP_005373772;XP_013369553 MODEL 8961889 protein-coding LOC102010318 seminal vesicle major clotting proteins-like NW_004955445 12149377 12156385 - 102010318 AGCD01039740;AGCD01039741;AGCD01039742;XM_005392442 XP_005392499 MODEL 8797907 protein-coding Ccdc172 coiled-coil domain containing 172 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); sperm midpiece (ortholog) NW_004955431 21099475 21193932 + 102022004 AGCD01030491;AGCD01030492;AGCD01030493;AGCD01030494;GBDF01159648;XM_013515752;XM_013515753;XM_013515754;XM_013515755;XR_001234579;XR_001234580 XP_013371206;XP_013371207;XP_013371208;XP_013371209 MODEL 9043280 ncrna LOC102018526 uncharacterized LOC102018526 NW_004955527 465817 467792 + 102018526 AGCD01069385;GBDF01190302;XR_264664 MODEL 9003977 protein-coding LOC102013527 olfactory receptor 5AK2-like NW_004955511 2117904 2118839 + 102013527 AGCD01066392;XM_005407984 XP_005408041 MODEL 39134127 misc_rna 7SK 7SK RNA 8798179 pseudo LOC102005033 COMM domain-containing protein 2 pseudogene NW_004955414 29282270 29282913 - 102005033 AGCD01015702 MODEL 8954718 protein-coding Slc4a10 solute carrier family 4 member 10 ENCODES a protein that exhibits sodium,bicarbonate:chloride antiporter activity (ortholog); sodium:bicarbonate symporter activity (ortholog); INVOLVED IN brain morphogenesis (ortholog); locomotory exploration behavior (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cognitive disorder (ortholog); FOUND IN apical dendrite (ortholog); apical plasma membrane (ortholog); axon terminus (ortholog) NW_004955449 11879070 12159981 - 102019870 AGCD01042094;AGCD01042095;AGCD01042096;AGCD01042097;AGCD01042098;AGCD01042099;AGCD01042100;AGCD01042101;AGCD01042102;AGCD01042103;AGCD01042104;AGCD01042105;AGCD01042106;GBBH01068682;XM_005393323;XM_005393324;XM_005393329 XP_005393380;XP_005393381;XP_005393386 MODEL 8867776 protein-coding Flrt2 fibronectin leucine rich transmembrane protein 2 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); basement membrane organization (ortholog); cell adhesion involved in heart morphogenesis (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uveal melanoma (ortholog); FOUND IN cell-cell junction (ortholog); extracellular region (ortholog); focal adhesion (ortholog) NW_004955438 8565319 8656195 + 102029008 AGCD01035161;AGCD01035162;GBCE01053936;XM_005390242;XM_005390243;XM_005390244;XM_005390246;XM_013517210;XM_013517211;XM_013517212;XM_013517213 XP_005390299;XP_005390300;XP_005390301;XP_005390303;XP_013372664;XP_013372665;XP_013372666;XP_013372667 MODEL 8762053 protein-coding Rer1 retention in endoplasmic reticulum sorting receptor 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN maintenance of protein localization in endoplasmic reticulum (ortholog); neuromuscular junction development (ortholog); positive regulation of protein localization to plasma membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955486 8791457 8802691 - 102007903 AGCD01059156;GBDJ01075964;XM_005404170;XM_005404171 XP_005404227;XP_005404228 MODEL 9019383 pseudo LOC102013866 ribosome maturation protein SBDS pseudogene NW_004955537 879385 880788 - 102013866 AGCD01070879 MODEL 9040848 protein-coding Lrp5 LDL receptor related protein 5 ENCODES a protein that exhibits coreceptor activity (ortholog); toxin transmembrane transporter activity (ortholog); Wnt receptor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); amino acid transport (ortholog); anatomical structure regression (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; N-cadherin signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955422 17394371 17475244 - 102004829 AGCD01022921;AGCD01022922;GBDK01238671;XM_013514225;XM_013514226 XP_013369679;XP_013369680 MODEL 8911630 protein-coding LOC102022588 olfactory receptor 51G2-like NW_004955414 20645409 20646350 + 102022588 AGCD01015385;XM_005380064 XP_005380121 MODEL 8754840 protein-coding Esd esterase D ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); identical protein binding (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Hypoxia (ortholog); osteoarthritis (ortholog); FOUND IN cytosol (ortholog) NW_004955431 524491 551871 - 102010084 AGCD01029869;AGCD01029870;GBBH01065118;GBCB01022499;XM_013515897 XP_013371351 MODEL 8967107 protein-coding Imp3 IMP U3 small nucleolar ribonucleoprotein 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN Mpp10 complex (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955450 2690814 2692336 + 102026925 AGCD01042395;GBDF01087621;XM_005393505 XP_005393562 MODEL 8737621 protein-coding Cenpi centromere protein I INVOLVED IN follicle-stimulating hormone signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN inner kinetochore (ortholog); kinetochore (ortholog); nuclear body (ortholog) NW_004955503 7237080 7341702 + 102014265 AGCD01064785;AGCD01064786;AGCD01064787;AGCD01064788;AGCD01064789;XM_005415260 XP_005415317 MODEL 8938590 protein-coding Sh3kbp1 SH3 domain containing kinase binding protein 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of B cell activation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955509 6157 344930 - 102003043 AGCD01065924;AGCD01065925;AGCD01065926;AGCD01065927;AGCD01065928;AGCD01065929;AGCD01065930;GBBH01118244;GBCB01003048;XM_005407792 XP_005407849 MODEL 8855956 protein-coding Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 INVOLVED IN endocytic recycling (ortholog); endosome organization (ortholog); membrane organization (ortholog); PARTICIPATES IN altered retromer-mediated pathway; Parkinson's disease pathway; retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) NW_004955501 5980407 6111424 - 102007035 AGCD01064176;AGCD01064177;AGCD01064178;GBBH01051729;GBCQ01064951;XM_005406836 XP_005406893 MODEL 8781223 ncrna LOC102007605 uncharacterized LOC102007605 NW_004955447 15774756 15787240 - 102007605 AGCD01041068;AGCD01041069;GBDF01126660;XR_001235716;XR_001235717 MODEL 8713163 protein-coding LOC102004318 vomeronasal type-2 receptor 116-like NW_004955532 320637 360886 - 102004318 AGCD01070114;AGCD01070115;AGCD01070116;XM_013507576 XP_013363030 MODEL 8770891 protein-coding Ak9 adenylate kinase 9 ENCODES a protein that exhibits AMP kinase activity (ortholog); CMP kinase activity (ortholog); dAMP kinase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955402 704 128521 - 102003075 AGCD01000001;AGCD01000002;AGCD01000003;AGCD01000004;AGCD01000005;AGCD01000006;AGCD01000007;AGCD01000008;GBDF01190641;XM_005372536;XM_005372537;XM_005372538;XM_005372541;XM_005372542;XM_013512310;XM_013512375 XP_005372593;XP_005372594;XP_005372595;XP_005372598;XP_005372599;XP_013367764;XP_013367829 MODEL 8722054 protein-coding Prpf38a pre-mRNA processing factor 38A INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955464 6742200 6761059 - 102021106 AGCD01050038;GBDJ01016093;XM_005398588 XP_005398645 MODEL 9067337 protein-coding LOC102006113 beta-galactosidase-1-like protein 3 NW_004955412 35224061 35251279 + 102006113 AGCD01013407;GBDF01102556;XM_013510984 XP_013366438 MODEL 8853927 protein-coding Clstn2 calsyntenin 2 INVOLVED IN associative learning (ortholog); inhibitory synapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); glutamatergic synapse (ortholog) NW_004955508 5069872 5656621 - 102023383 AGCD01065898;AGCD01065899;AGCD01065900;AGCD01065901;AGCD01065902;AGCD01065903;GBDI01035836;XM_005407778;XM_005407779 XP_005407835;XP_005407836 MODEL 8982300 protein-coding LOC102007220 olfactory receptor 52H1-like NW_004955414 21459569 21460513 - 102007220 AGCD01015420;XM_005380497 XP_005380554 MODEL 8940178 ncrna LOC102009915 uncharacterized LOC102009915 NW_004955458 5401003 5402675 + 102009915 AGCD01047487;GBBH01073358;XR_262984 MODEL 8764140 protein-coding Arhgap36 Rho GTPase activating protein 36 INVOLVED IN lateral motor column neuron differentiation (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955473 3914769 3922938 - 102004064 AGCD01053941;XM_013523052 XP_013378506 MODEL 9028095 ncrna LOC102003258 uncharacterized LOC102003258 NW_004955424 19212442 19216315 - 102003258 AGCD01024810;GBDF01079876;XR_261081 MODEL 8884281 protein-coding Abhd13 abhydrolase domain containing 13 ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); ASSOCIATED WITH thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite cytoplasm (ortholog) NW_004955404 3587277 3605649 - 102023865 AGCD01003278;GBCB01088372;XM_005374009 XP_005374066 MODEL 39131953 rrna 5S_rRNA 5S ribosomal RNA 8812605 protein-coding Adig adipogenin INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); lipid droplet formation (ortholog); ASSOCIATED WITH sarcoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955445 18134107 18138198 - 102005854 AGCD01039898;GBDF01176282;XM_005392586 XP_005392643 MODEL 39131777 rrna 5S_rRNA 5S ribosomal RNA 8703523 protein-coding Angel1 angel homolog 1 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein domain specific binding (ortholog); RNA 2',3'-cyclic phosphatase activity (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, non-stop decay (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955438 776213 805020 - 102004006 AGCD01034963;GBDF01001997;XM_005390162;XM_005390163;XM_005390164;XM_005390165;XM_005390166;XM_013517174 XP_005390219;XP_005390220;XP_005390221;XP_005390222;XP_005390223;XP_013372628 MODEL 8718094 protein-coding Slc4a11 solute carrier family 4 member 11 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); borate efflux transmembrane transporter activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); borate transport (ortholog); cellular hypotonic response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); congenital hereditary endothelial dystrophy of cornea (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955415 14123021 14133437 - 102025571 AGCD01016288;GBCE01153106;GBDK01418034;XM_013512257 XP_013367711 MODEL 8766212 protein-coding Rufy2 RUN and FYVE domain containing 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955425 20632271 20658582 - 102007573 AGCD01025751;GBCE01097206;GBDF01000428;XM_005385993;XM_005385995;XM_005385997;XM_013514826;XR_261163 XP_005386050;XP_005386052;XP_005386054;XP_013370280 MODEL 8922723 protein-coding Wipf3 WAS/WASL interacting protein family member 3 ENCODES a protein that exhibits SH3 domain binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN synapse (ortholog) NW_004955410 31166874 31227377 + 102027826 AGCD01011317;AGCD01011318;GBCQ01031184;XM_013510497 XP_013365951 MODEL 9006538 protein-coding Cgn cingulin ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); epithelial cell morphogenesis (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical junction complex (ortholog); bicellular tight junction (ortholog); brush border (ortholog) NW_004955589 855715 881123 - 102020623 AGCD01076183;GBCQ01070264;XM_005414571;XM_013509956;XM_013509957;XM_013509958 XP_005414628;XP_013365410;XP_013365411;XP_013365412 MODEL 8907317 protein-coding Daglb diacylglycerol lipase beta ENCODES a protein that exhibits lipase activity (ortholog); monoacylglycerol lipase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); icosanoid metabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 13226574 13268060 + 102021529 AGCD01048674;AGCD01048675;AGCD01048676;AGCD01048677;AGCD01048678;GBDK01146299;XM_005397891 XP_005397948 MODEL 9014771 protein-coding Pmpcb peptidase, mitochondrial processing subunit beta ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN mitochondrial protein processing (ortholog); protein localization to mitochondrion (ortholog); protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Deglutition Disorders (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial processing peptidase complex (ortholog); mitochondrion (ortholog) NW_004955410 8304088 8317639 + 102016455 AGCD01010744;GBDK01229185;XM_005377228;XM_005377229 XP_005377285;XP_005377286 MODEL 8970231 protein-coding Imp4 IMP U3 small nucleolar ribonucleoprotein 4 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN Mpp10 complex (ortholog); nucleolus (ortholog); preribosome (ortholog) NW_004955459 30502 33589 + 102012066 AGCD01047923;GBDF01049446;XM_005397541 XP_005397598 MODEL 8959247 ncrna LOC102008363 uncharacterized LOC102008363 NW_004955449 1293468 1297009 + 102008363 AGCD01041795;GBDF01187862;XR_262482 MODEL 8912451 trna trnQ(ttg) tRNA-Gln MT 3745 3815 - 15822236 8940114 protein-coding LOC102008777 atherin-like NW_004955558 851314 852320 + 102008777 AGCD01073394;GBCE01172818;GBDF01225096;XM_013508881 XP_013364335 MODEL 8746955 protein-coding B4galt1 beta-1,4-galactosyltransferase 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); beta-tubulin binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); angiogenesis involved in wound healing (ortholog); binding of sperm to zona pellucida (ortholog); PARTICIPATES IN galactose metabolic pathway; galactosemia pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) NW_004955472 2490649 2536053 + 102011303 AGCD01053467;AGCD01053468;AGCD01053469;AGCD01053470;AGCD01053471;GBCE01026609;XM_005401108;XM_013522991;XM_013522992;XM_013522993;XM_013522994;XM_013522995 XP_005401165;XP_013378445;XP_013378446;XP_013378447;XP_013378448;XP_013378449 MODEL 8720848 protein-coding Cdca3 cell division cycle associated 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN adherens junction (ortholog) NW_004955413 4448711 4450917 - 102004048 AGCD01013615;GBDI01105802;XM_013511344 XP_013366798 MODEL 8955256 protein-coding LOC102012336 guanylate-binding protein 4-like NW_004955423 4956079 4970449 + 102012336 AGCD01023550;GBDK01006373;XM_013514414;XM_013514415 XP_013369868;XP_013369869 MODEL 8848088 protein-coding Actg2 actin gamma 2, smooth muscle INVOLVED IN cellular response to acetaldehyde (ortholog); cellular response to interleukin-6 (ortholog); response to ethanol (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcoholic liver cirrhosis (ortholog); autosomal dominant familial visceral neuropathy (ortholog); FOUND IN cell periphery (ortholog) NW_004955424 11779805 11802446 - 102007914 AGCD01024574;GBDJ01017125;XM_005385535 XP_005385592 MODEL 9005360 protein-coding LOC102005034 cyclin-dependent kinase inhibitor 2A-like NW_004955472 12312045 12318961 + 102005034 AGCD01053794;GBBH01193886;XM_005401166 XP_005401223 MODEL 8933403 protein-coding Sp110 SP110 nuclear body protein INVOLVED IN positive regulation of apoptotic process (ortholog); response to bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955453 4915541 4939438 + 102028713 AGCD01044701;GBCQ01123762;XM_005395419;XM_005395420;XM_013519981 XP_005395476;XP_005395477;XP_013375435 MODEL 8806893 protein-coding Cables1 Cdk5 and Abl enzyme substrate 1 INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955402 11415913 11514132 + 102019553 AGCD01000300;AGCD01000301;GBCE01064555;GBCQ01094084;XM_013503852 XP_013359306 MODEL 39133992 misc_rna 7SK 7SK RNA 8761309 protein-coding LOC102009124 uncharacterized LOC102009124 NW_004955447 15117933 15159860 - 102009124 AGCD01041033;AGCD01041034;AGCD01041035;AGCD01041036;AGCD01041037;GBDF01196985;XM_013518482 XP_013373936 MODEL 8942190 protein-coding LOC102007606 prolactin-like NW_004955576 1119907 1125387 + 102007606 AGCD01075360;GBCQ01002340;XM_005413941 XP_005413998 MODEL 39131648 rrna 5S_rRNA 5S ribosomal RNA 10135390 protein-coding Brk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell motility (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN lamellipodium (ortholog); SCAR complex (ortholog) NW_004955561 1545921 1554423 + 106147451 AGCD01073856;GBDF01010733;XM_013509100 XP_013364554 MODEL 9045862 pseudo LOC102007222 protein SPT2 homolog pseudogene NW_004955474 802672 804690 - 102007222 AGCD01054229 MODEL 8901444 ncrna LOC102010321 uncharacterized LOC102010321 NW_004955402 42833311 42840895 + 102010321 AGCD01001049;GBCB01051675;XR_259085 MODEL 9048523 protein-coding Ccdc174 coiled-coil domain containing 174 ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Infantile Hypotonia with Psychomotor Retardation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955429 17201563 17218726 + 102006373 AGCD01028847;AGCD01028848;GBDI01116212;XM_013515548 XP_013371002 MODEL 8822595 protein-coding LOC102011088 olfactory receptor 1361-like NW_004955408 1647226 1658966 + 102011088 AGCD01007970;XM_005376563 XP_005376620 MODEL 8753505 protein-coding LOC102013528 olfactory receptor 8I2 NW_004955511 1030944 1031876 + 102013528 AGCD01066354;XM_005408222 XP_005408279 MODEL 8856161 ncrna LOC102014256 uncharacterized LOC102014256 NW_004955421 27341522 27382472 - 102014256 AGCD01022282;GBDJ01081484;XR_001233846;XR_001233847;XR_001233848 MODEL 8884607 protein-coding Ap5s1 adaptor related protein complex 5 subunit sigma 1 INVOLVED IN double-strand break repair via homologous recombination (ortholog); endosomal transport (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog); cytosol (ortholog); late endosome (ortholog) NW_004955415 14665450 14669456 + 102004803 AGCD01016304;GBDF01193099;XM_005380809;XM_005380810 XP_005380866;XP_005380867 MODEL 8770945 pseudo LOC102003261 40S ribosomal protein S20 pseudogene NW_004955501 30940 31292 + 102003261 AGCD01063987 MODEL 8930602 protein-coding Arhgap39 Rho GTPase activating protein 39 INVOLVED IN postsynapse organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955454 3153755 3213298 - 102014867 AGCD01045057;AGCD01045058;GBDK01021559;XM_005395919;XM_005395920;XM_005395921 XP_005395976;XP_005395977;XP_005395978 MODEL 9063569 protein-coding Flrt3 fibronectin leucine rich transmembrane protein 3 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cell-cell adhesion (ortholog); embryonic morphogenesis (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism 21 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); Spontaneous Abortions (ortholog); FOUND IN axon terminus (ortholog); axonal growth cone (ortholog); cell-cell junction (ortholog) NW_004955415 23669749 23683235 - 102004804 AGCD01016560;GBDK01192877;XM_005380892;XM_013512282 XP_005380949;XP_013367736 MODEL 39131956 rrna 5S_rRNA 5S ribosomal RNA 8808602 protein-coding Abhd14a abhydrolase domain containing 14A ENCODES a protein that exhibits acetyltransferase activity (ortholog); FOUND IN cytoplasm (ortholog); Golgi membrane (ortholog) NW_004955532 3612440 3624797 + 102023394 AGCD01070289;AGCD01070290;AGCD01070291;GBCQ01179200;XM_005410333;XM_013507619 XP_005410390;XP_013363073 MODEL 8971979 ncrna LOC102022592 uncharacterized LOC102022592 NW_004955415 28798790 28804171 - 102022592 AGCD01016645;XR_260321 MODEL 8732752 protein-coding LOC102004691 leucine-rich repeat-containing protein 51 NW_004955414 19236475 19252002 - 102004691 AGCD01015308;GBBH01154964;XM_005380016;XM_005380017;XM_005380018;XM_013511820;XM_013511821;XM_013511822;XM_013511823 XP_005380073;XP_005380074;XP_005380075;XP_013367274;XP_013367275;XP_013367276;XP_013367277 MODEL 8704622 protein-coding Cenpk centromere protein K INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); castration-resistant prostate carcinoma (ortholog); cervical cancer (ortholog); FOUND IN inner kinetochore (ortholog); nucleus (ortholog) NW_004955446 3531702 3583914 + 102021058 AGCD01040022;GBDF01226475;XM_005392631 XP_005392688 MODEL 9002152 ncrna LOC102004322 uncharacterized LOC102004322 NW_004955438 21001399 21004768 - 102004322 AGCD01035528;GBDJ01373094;XR_001235152 MODEL 8801405 protein-coding Prpf38b pre-mRNA processing factor 38B ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); High Myopia (ortholog) NW_004955435 12162730 12172136 + 102019729 AGCD01033135;GBDJ01081283;XM_005388832 XP_005388889 MODEL 9061503 protein-coding Akain1 A-kinase anchor inhibitor 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of protein-containing complex assembly (ortholog); FOUND IN cytosol (ortholog) NW_004955402 5814876 5864612 + 102011257 AGCD01000142;AGCD01000143;XM_005372642 XP_005372699 MODEL 9007740 protein-coding Sp140 SP140 nuclear body protein ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog) NW_004955453 4864812 4911699 - 102008376 AGCD01044700;AGCD01044701;GBDI01121434;XM_013519810;XM_013519811 XP_013375264;XP_013375265 MODEL 8990249 protein-coding Cgnl1 cingulin like 1 INVOLVED IN actin filament organization (ortholog); angiogenesis (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); apical junction complex (ortholog); bicellular tight junction (ortholog) NW_004955450 16785358 16913718 - 102020624 AGCD01042853;AGCD01042854;GBDJ01137564;XM_005393852;XM_013518875 XP_005393909;XP_013374329 MODEL 8909297 protein-coding Wipi1 WD repeat domain, phosphoinositide interacting 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); nuclear estrogen receptor binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH cholestasis (ortholog); lipid storage disease (ortholog); FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) NW_004955478 4309975 4341107 + 102028856 AGCD01055847;GBDF01159484;XM_013503209;XM_013503210;XM_013503211 XP_013358663;XP_013358664;XP_013358665 MODEL 8937104 protein-coding LOC102018529 putative olfactory receptor 2B3 NW_004955537 2603825 2604915 - 102018529 AGCD01070933;GBDF01030354;XM_005410626 XP_005410683 MODEL 39134128 misc_rna 7SK 7SK RNA 8917689 protein-coding Rufy3 RUN and FYVE domain containing 3 ENCODES a protein that exhibits dynactin binding (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of axonogenesis (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955447 2200788 2266008 - 102022439 AGCD01040535;AGCD01040536;GBCE01184705;XM_005392776;XM_005392777;XM_005392778;XM_005392779;XM_013518505;XM_013518506 XP_005392833;XP_005392834;XP_005392835;XP_005392836;XP_013373959;XP_013373960 MODEL 8797648 protein-coding Clstn3 calsyntenin 3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); enzyme inhibitor activity (ortholog); neurexin family protein binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); cold-induced thermogenesis (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 4690637 4719929 + 102012942 AGCD01013624;GBBH01006299;XM_005378860 XP_005378917 MODEL 8830438 trna trnR(tcg) tRNA-Arg MT 9812 9879 + 15822210 9038940 pseudo LOC102008374 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955452 16615403 16615951 + 102008374 AGCD01044520 MODEL 9052000 pseudo LOC102009916 KATNB1-like protein 1 pseudogene NW_004955458 3895009 3896301 + 102009916 AGCD01047353 MODEL 8935000 protein-coding Rere arginine-glutamic acid dipeptide repeats ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN branching morphogenesis of a nerve (ortholog); cerebellar granule cell precursor proliferation (ortholog); cerebellar Purkinje cell layer maturation (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN histone deacetylase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955486 4303573 4695800 + 102026871 AGCD01059057;AGCD01059058;AGCD01059059;AGCD01059060;AGCD01059061;AGCD01059062;AGCD01059063;GBBH01091311;GBDF01085949;XM_013504212 XP_013359666 MODEL 8838886 protein-coding LOC102007223 cystatin-C-like NW_004955415 30634590 30646109 + 102007223 AGCD01016666;GBDI01294913;XM_005380976;XM_013512135 XP_005381033;XP_013367589 MODEL 8768871 protein-coding Cdca4 cell division cycle associated 4 ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955538 3345116 3356463 - 102003066 AGCD01071160;AGCD01071161;GBDK01219071;XM_005410853;XM_013507888;XM_013507889;XM_013507890;XM_013507891;XM_013507892;XM_013507893 XP_005410910;XP_013363342;XP_013363343;XP_013363344;XP_013363345;XP_013363346;XP_013363347 MODEL 8765697 protein-coding LOC102010322 cytochrome P450 1A2 ENCODES a protein that exhibits caffeine oxidase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN alkaloid metabolic process (ortholog); cellular respiration (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; caffeine pharmacokinetics pathway; clomipramine pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); Atrophy (ortholog) NW_004955450 3165107 3171894 - 102010322 AGCD01042426;GBBH01140851;XM_005393544;XM_005393545 XP_005393601;XP_005393602 MODEL 9031206 ncrna LOC102011091 uncharacterized LOC102011091 NW_004955409 10810505 10829604 + 102011091 AGCD01009485;GBDI01024783;XR_259768 MODEL 8871925 protein-coding Lrp6 LDL receptor related protein 6 ENCODES a protein that exhibits apolipoprotein binding (ortholog); coreceptor activity (ortholog); frizzled binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis elongation (ortholog); axis elongation involved in somitogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autosomal dominant osteopetrosis 4 (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955413 9080901 9237644 - 102014436 AGCD01013892;AGCD01013893;AGCD01013894;AGCD01013895;AGCD01013896;AGCD01013897;AGCD01013898;AGCD01013899;AGCD01013900;GBCB01110976;XM_005378957 XP_005379014 MODEL 8819446 protein-coding Ccdc175 coiled-coil domain containing 175 ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955466 13225350 13277682 - 102008929 AGCD01051154;AGCD01051155;AGCD01051156;GBDF01127452;XM_013521950;XM_013521951;XR_001236804;XR_001236805 XP_013377404;XP_013377405 MODEL 9016750 protein-coding Angel2 angel homolog 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA 2',3'-cyclic phosphatase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); mitochondrial mRNA 3'-end processing (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) NW_004955406 4589849 4606380 + 102015920 AGCD01005697;AGCD01005698;AGCD01005699;GBDF01055236;XM_005374730;XM_005374732;XM_005374733;XM_013520014;XM_013520031 XP_005374787;XP_005374789;XP_005374790;XP_013375468;XP_013375485 MODEL 9010093 protein-coding Adipoq adiponectin, C1Q and collagen domain containing ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); brown fat cell differentiation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); amyloidosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955420 20911181 20922992 - 102027858 AGCD01021111;GBCB01001605;XM_005383261;XM_005383262 XP_005383318;XP_005383319 MODEL 9046725 pseudo LOC102011943 allograft inflammatory factor 1 pseudogene NW_004955404 28664142 28664895 + 102011943 AGCD01003957;XM_005374142 MODEL 8836021 protein-coding LOC102006115 C-type lectin domain family 7 member A-like NW_004955413 7254513 7276098 - 102006115 AGCD01013806;AGCD01013807;AGCD01013808;GBBH01168364;XM_005378930 XP_005378987 MODEL 8825593 protein-coding Dalrd3 DALR anticodon binding domain containing 3 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN tRNA C3-cytosine methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy 86 (ortholog) NW_004955532 1038861 1042362 - 102007589 AGCD01070162;AGCD01070163;GBDK01142248;XM_005410183 XP_005410240 MODEL 9000553 protein-coding Cables2 Cdk5 and Abl enzyme substrate 2 INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); gastrulation (ortholog); gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955528 1656475 1674632 + 102028230 AGCD01069567;AGCD01069568;GBCQ01012494;XM_005410021;XM_013507498 XP_005410078;XP_013362952 MODEL 8893293 protein-coding Dnajc14 DnaJ heat shock protein family (Hsp40) member C14 ENCODES a protein that exhibits dopamine receptor binding (ortholog); G protein-coupled receptor binding (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955458 3454894 3467546 - 102022888 AGCD01047302;AGCD01047303;GBCE01004932;XM_005397265 XP_005397322 MODEL 8920840 protein-coding LOC102009127 extracellular matrix protein 2 NW_004955580 238638 245468 + 102009127 AGCD01075592;AGCD01075593;GBDI01378283;XM_005414221 XP_005414278 MODEL 8806967 protein-coding Impa1 inositol monophosphatase 1 ENCODES a protein that exhibits fructose-1-phosphatase activity (ortholog); glucose-1-phosphatase activity (ortholog); glucose-6-phosphatase activity (ortholog); INVOLVED IN phosphate-containing compound metabolic process (ortholog); phosphatidylinositol biosynthetic process (ortholog); signal transduction (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 59 (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955417 14114 40128 - 102023696 AGCD01017781;AGCD01017782;AGCD01017783;AGCD01017784;GBCQ01072950;XM_005381716;XM_013512813;XM_013512814 XP_005381773;XP_013368267;XP_013368268 MODEL 8974796 protein-coding LOC102013867 nucleosome assembly protein 1-like 4 NW_004955538 1376841 1381873 - 102013867 AGCD01071056;XM_013507820 XP_013363274 MODEL 39131778 rrna 5S_rRNA 5S ribosomal RNA 8757645 protein-coding Cgref1 cell growth regulator with EF-hand domain 1 INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Liver Neoplasms (ortholog) NW_004955469 9072333 9086427 - 102019381 AGCD01052489;GBCE01148200;XM_005400451;XM_005400452 XP_005400508;XP_005400509 MODEL 8984713 ncrna LOC102013534 uncharacterized LOC102013534 NW_004955434 16255649 16273655 - 102013534 AGCD01032521;AGCD01032522;AGCD01032523;AGCD01032524;GBDF01288452;XR_261620 MODEL 9010161 protein-coding Sh3pxd2a SH3 and PX domains 2A ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); osteoclast fusion (ortholog); reactive oxygen species metabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); podosome (ortholog) NW_004955485 6811857 7008011 + 102030427 AGCD01058629;AGCD01058630;GBDF01004113;GBDI01009548;XM_005403799 XP_005403856 MODEL 39131976 rrna 5S_rRNA 5S ribosomal RNA 9037443 protein-coding Pms1 PMS1 homolog 1, mismatch repair system component ENCODES a protein that exhibits DNA endonuclease activity (ortholog); enzyme binding (ortholog); INVOLVED IN mismatch repair (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN MutLbeta complex (ortholog); nucleus (ortholog) NW_004955403 9021488 9100442 - 102005433 AGCD01001900;AGCD01001901;GBDK01434121;XM_005373313;XM_013512339 XP_005373370;XP_013367793 MODEL 8858868 protein-coding LOC102022594 protein FAM24A-like NW_004955477 1070372 1097654 - 102022594 AGCD01055502;GBDF01046801;XM_005401947;XM_005401948;XM_005401949;XM_013503111;XM_013503112;XM_013503113 XP_005402004;XP_005402005;XP_005402006;XP_013358565;XP_013358566;XP_013358567 MODEL 8736223 pseudo LOC102004327 nuclear inhibitor of protein phosphatase 1 pseudogene NW_004955548 1082609 1083641 + 102004327 AGCD01072356 MODEL 39131489 protein-coding AKAIN1 A-kinase anchor inhibitor 1 8882824 protein-coding Prpf39 pre-mRNA processing factor 39 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955409 16824638 16845778 - 102008194 AGCD01009744;GBDF01060020;XM_005376861;XM_005376863;XM_005376864;XM_005376865;XM_005376866;XM_013510344 XP_005376918;XP_005376920;XP_005376921;XP_005376922;XP_005376923;XP_013365798 MODEL 8775736 protein-coding LOC102012342 uncharacterized LOC102012342 NW_004955504 2063804 2068813 - 102012342 AGCD01064853;GBDI01262175;GBDK01263929;XM_013505916 XP_013361370 MODEL 8929936 protein-coding LOC102008778 olfactory receptor 1361-like NW_004955442 14157622 14158563 - 102008778 AGCD01037803;XM_005391854 XP_005391911 MODEL 8725587 protein-coding Brme1 break repair meiotic recombinase recruitment factor 1 ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); site of double-strand break (ortholog) NW_004955415 32652978 32667873 - 102015838 AGCD01016730;GBBH01138965;XM_013512198;XM_013512199;XM_013512200;XM_013512201;XM_013512202;XM_013512203;XM_013512204;XM_013512205;XM_013512206;XM_013512207 XP_013367652;XP_013367653;XP_013367654;XP_013367655;XP_013367656;XP_013367657;XP_013367658;XP_013367659;XP_013367660;XP_013367661 MODEL 8858267 protein-coding Wipi2 WD repeat domain, phosphoinositide interacting 2 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytosol (ortholog) NW_004955460 10090343 10132724 + 102026612 AGCD01048572;AGCD01048573;GBDF01050079;XM_005397828;XM_005397829;XM_005397830;XM_005397831;XM_005397833;XM_013521133;XM_013521134 XP_005397885;XP_005397886;XP_005397887;XP_005397888;XP_005397890;XP_013376587;XP_013376588 MODEL 9000631 trna trnS1(gct) tRNA-Ser MT 11621 11681 + 15822231 9024072 protein-coding LOC102009925 olfactory receptor 8B12-like NW_004955412 25567776 25568708 - 102009925 AGCD01013160;XM_005378426 XP_005378483 MODEL 8708855 protein-coding Actl10 actin like 10 NW_004955422 27650166 27651452 - 102026990 AGCD01023331;GBDF01090365;XM_005384923 XP_005384980 MODEL 8700199 protein-coding Clta clathrin light chain A ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN clathrin coat (ortholog); clathrin complex (ortholog); clathrin-coated pit (ortholog) NW_004955472 96958 117230 - 102029957 AGCD01053314;AGCD01053315;GBBH01000318;GBDI01022015;XM_013522981 XP_013378435 MODEL 8894546 pseudo LOC102007224 selenide, water dikinase 2-like NW_004955417 15154063 15155323 + 102007224 AGCD01018224 MODEL 8711063 protein-coding Slc4a1ap solute carrier family 4 member 1 adaptor protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955469 9617238 9654972 + 102007215 AGCD01052510;AGCD01052511;GBDF01089096;XM_005400510;XM_005400511 XP_005400567;XP_005400568 MODEL 8772004 protein-coding Arhgap4 Rho GTPase activating protein 4 ENCODES a protein that exhibits GTPase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); negative regulation of fibroblast migration (ortholog); nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); growth cone (ortholog) NW_004955580 586986 600299 - 102022869 AGCD01075613;GBDI01115454;XM_013509693;XM_013509694 XP_013365147;XP_013365148 MODEL 8916839 protein-coding Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); calcium-dependent ATPase activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transport (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cilium (ortholog) NW_004955561 1727935 1851907 - 102019541 AGCD01073864;GBDJ01014644;XM_005413071;XM_005413077 XP_005413128;XP_005413134 MODEL 39133993 misc_rna 7SK 7SK RNA 8991392 protein-coding Esf1 ESF1 nucleolar pre-rRNA processing protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955415 23156521 23221027 - 102003229 AGCD01016551;AGCD01016552;GBCQ01150807;XM_005380886 XP_005380943 MODEL 8885401 protein-coding LOC102004692 olfactory receptor 51I1 NW_004955414 21341220 21342158 - 102004692 AGCD01015415;XM_005380084 XP_005380141 MODEL 8771779 pseudo LOC102010323 40S ribosomal protein S20 pseudogene NW_004955596 302819 303144 - 102010323 AGCD01076514 MODEL 8982864 pseudo LOC102006116 28S ribosomal protein S36, mitochondrial pseudogene NW_004955413 12416468 12416769 - 102006116 AGCD01013988 MODEL 8722088 protein-coding Ccdc178 coiled-coil domain containing 178 INVOLVED IN manchette assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) NW_004955402 20076834 20429089 - 102023311 AGCD01000569;AGCD01000570;AGCD01000571;AGCD01000572;AGCD01000573;AGCD01000574;GBDF01123390;XM_005372759;XM_013507772;XM_013507853;XM_013507897;XM_013507911;XM_013507942 XP_005372816;XP_013363226;XP_013363307;XP_013363351;XP_013363365;XP_013363396 MODEL 9046460 protein-coding Adipor1 adiponectin receptor 1 ENCODES a protein that exhibits adipokinetic hormone receptor activity (ortholog); adiponectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid oxidation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 38939167 38955647 - 102003834 AGCD01006613;AGCD01006614;GBBH01088732;GBCB01021805;XM_013522468 XP_013377922 MODEL 8731100 pseudo LOC102018531 thioredoxin pseudogene NW_004955547 1523626 1523939 + 102018531 AGCD01072227 MODEL 8946261 protein-coding LOC102005035 ATP-binding cassette sub-family C member 11 NW_004955474 7090746 7169568 + 102005035 AGCD01054513;AGCD01054514;AGCD01054515;XM_013502712 XP_013358166 MODEL 8939448 ncrna LOC102008377 uncharacterized LOC102008377 NW_004955406 39188080 39231357 + 102008377 AGCD01006621;AGCD01006622;AGCD01006623;GBBH01127399;XR_001236960;XR_001236961;XR_001236965;XR_259524 MODEL 8940674 protein-coding Cabp1 calcium binding protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of cell communication by electrical coupling (ortholog); negative regulation of protein import into nucleus (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); melanoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955455 11000763 11068922 - 102007300 AGCD01045974;AGCD01045975;AGCD01045976;AGCD01045977;AGCD01045978;GBDF01187384;XM_005396494;XM_005396495;XM_005396496 XP_005396551;XP_005396552;XP_005396553 MODEL 8937415 protein-coding Ap5z1 adaptor related protein complex 5 subunit zeta 1 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); axon development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955460 10997554 11009435 - 102007521 AGCD01048626;GBDF01119923;XM_005397853 XP_005397910 MODEL 9055587 pseudo LOC102008782 protein SET-like NW_004955563 171952 176650 - 102008782 AGCD01074050;AGCD01074051 MODEL 9066467 protein-coding Rerg RAS like estrogen regulated growth inhibitor ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); response to hormone (ortholog); ASSOCIATED WITH breast cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955413 11825235 11940390 - 102004687 AGCD01013973;AGCD01013974;AGCD01013975;AGCD01013976;GBCQ01095141;XM_005379016;XM_013511678 XP_005379073;XP_013367132 MODEL 8985996 pseudo LOC102003264 PHD finger protein 7-like NW_004955429 11735749 11737540 - 102003264 AGCD01028693 MODEL 8868229 protein-coding Abhd14b abhydrolase domain containing 14B ENCODES a protein that exhibits hydrolase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955532 3615214 3619637 - 102023739 AGCD01070290;GBBH01228009;GBDI01068224;XM_005410334 XP_005410391 MODEL 39131549 protein-coding CDCA5 cell division cycle associated 5 8823933 pseudo LOC102007607 ubiquitin-fold modifier 1 pseudogene NW_004955583 28661 29029 - 102007607 AGCD01075791 MODEL 8953675 pseudo LOC102011094 ubiquitin-conjugating enzyme E2 D3-like NW_004955409 26283548 26284242 - 102011094 AGCD01010170 MODEL 39131649 rrna 5S_rRNA 5S ribosomal RNA 8771385 protein-coding Cenpl centromere protein L ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN inner kinetochore (ortholog) NW_004955406 13949697 13963827 - 102007968 AGCD01005955;AGCD01005956;GBDI01246384;XM_005374873 XP_005374930 MODEL 8944017 ncrna LOC102011945 uncharacterized LOC102011945 NW_004955405 15509552 15549105 + 102011945 AGCD01004947;AGCD01004948;GBDF01052663;XR_259378;XR_259379 MODEL 9012915 protein-coding Lrp8 LDL receptor related protein 8 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN ammon gyrus development (ortholog); cellular response to cholesterol (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN axon (ortholog); caveola (ortholog); cell surface (ortholog) NW_004955464 5837002 5912178 + 102025556 AGCD01050015;GBDF01193162;GBDI01325997;XM_013521674;XM_013521675;XM_013521676;XM_013521677;XM_013521678;XM_013521679;XM_013521680;XM_013521681;XM_013521682;XM_013521683;XM_013521684;XM_013521685;XM_013521686 XP_013377128;XP_013377129;XP_013377130;XP_013377131;XP_013377132;XP_013377133;XP_013377134;XP_013377135;XP_013377136;XP_013377137;XP_013377138;XP_013377139;XP_013377140 MODEL 8913397 protein-coding Sp2 Sp2 transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circulatory system development (ortholog); embryonic organ development (ortholog); fibroblast proliferation (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 13205463 13231181 - 102012492 AGCD01043460;AGCD01043461;AGCD01043462;GBDI01263587;XM_005394259;XM_005394260;XM_005394261 XP_005394316;XP_005394317;XP_005394318 MODEL 39134129 misc_rna 7SK 7SK RNA 8814457 protein-coding Dand5 DAN domain BMP antagonist family member 5 ENCODES a protein that exhibits morphogen activity (ortholog); nodal binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN atrial septum development (ortholog); determination of heart left/right asymmetry (ortholog); determination of left/right asymmetry in lateral mesoderm (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); uterine corpus endometrial carcinoma (ortholog); visceral heterotaxy 13 (ortholog) NW_004955415 32012637 32015965 + 102014242 AGCD01016708;XM_005381142 XP_005381199 MODEL 8878856 protein-coding LOC102014258 mortality factor 4-like protein 1 NW_004955422 14066167 14067136 + 102014258 AGCD01022848;XM_013513833 XP_013369287 MODEL 8732073 protein-coding Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 INVOLVED IN cellular response to starvation (ortholog); negative regulation of mitochondrial electron transport, NADH to ubiquinone (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955518 941610 1016097 + 102005292 AGCD01067750;AGCD01067751;AGCD01067752;AGCD01067753;AGCD01067754;GBCQ01153813;XM_005409057;XM_013506969 XP_005409114;XP_013362423 MODEL 8798348 protein-coding LOC102009128 zinc finger protein 304 NW_004955584 189872 203610 + 102009128 AGCD01075926;GBDF01154035;XM_005414360 XP_005414417 MODEL 8822692 protein-coding Rufy4 RUN and FYVE domain containing 4 ENCODES a protein that exhibits dynactin binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to interleukin-4 (ortholog); multivesicular body-lysosome fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN autophagosome (ortholog); endolysosome (ortholog); lysosome (ortholog) NW_004955453 15243125 15259086 - 102016885 AGCD01044890;GBCE01034218;XM_005395668;XM_013519836 XP_005395725;XP_013375290 MODEL 8976223 protein-coding Impa2 inositol monophosphatase 2 ENCODES a protein that exhibits glucose-1-phosphatase activity (ortholog); glycerol-2-phosphatase activity (ortholog); inositol monophosphate 1-phosphatase activity (ortholog); INVOLVED IN response to lithium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955402 1119376 1143589 - 102015360 AGCD01000048;GBDI01175847;XM_005372574 XP_005372631 MODEL 39131779 rrna 5S_rRNA 5S ribosomal RNA 9036126 protein-coding LOC102013536 uncharacterized LOC102013536 NW_004955526 4264331 4315647 - 102013536 AGCD01069364;AGCD01069365;GBDJ01399642;XM_013507356 XP_013362810 MODEL 9036153 protein-coding Brms1 BRMS1 transcriptional repressor and anoikis regulator ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of anoikis (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 18981984 18989730 + 102014370 AGCD01022970;GBDJ01187942;XM_005384413;XM_005384415;XM_005384417;XM_013514159 XP_005384470;XP_005384472;XP_005384474;XP_013369613 MODEL 8975974 protein-coding Wiz WIZ zinc finger ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); histone methyltransferase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of nuclear cell cycle DNA replication (ortholog); protein stabilization (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 7810145 7834908 + 102005610 AGCD01062166;AGCD01062167;AGCD01062168;GBBH01165686;GBDI01322868;XM_013505122 XP_013360576 MODEL 9050136 protein-coding Angpt1 angiopoietin 1 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ regeneration (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); PARTICIPATES IN angiopoietin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); brain ischemia (ortholog); FOUND IN extracellular region (ortholog); membrane raft (ortholog); microvillus (ortholog) NW_004955417 30199508 30386695 - 102028535 AGCD01018618;AGCD01018619;AGCD01018620;GBCB01098477;GBDJ01356193;XM_005381965 XP_005382022 MODEL 8998837 protein-coding Cltb clathrin light chain B ENCODES a protein that exhibits peptide binding (ortholog); INVOLVED IN synaptic vesicle endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN ciliary membrane (ortholog); clathrin coat (ortholog); plasma membrane (ortholog) NW_004955408 28692933 28717566 - 102010977 AGCD01008722;AGCD01008723;GBCC01027306;GBDF01051234;XM_005376376;XM_005376377 XP_005376433;XP_005376434 MODEL 39131979 rrna 5S_rRNA 5S ribosomal RNA 8731492 protein-coding B4galt2 beta-1,4-galactosyltransferase 2 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); lactose synthase activity (ortholog); N-acetyllactosamine synthase activity (ortholog); INVOLVED IN brain development (ortholog); cerebellar Purkinje cell layer development (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955537 3506836 3516436 + 102012578 AGCD01070960;GBBH01172270;XM_005410710;XM_013507782 XP_005410767;XP_013363236 MODEL 8909719 pseudo LOC102013537 coiled-coil domain-containing protein 90B, mitochondrial pseudogene NW_004955533 59109 60126 - 102013537 AGCD01070311 MODEL 39133994 misc_rna 7SK 7SK RNA 8876928 protein-coding LOC102004693 olfactory receptor 6 NW_004955414 22664983 22665967 - 102004693 AGCD01015469;GBBH01083993;XM_013511766 XP_013367220 MODEL 8867073 ncrna LOC102006117 uncharacterized LOC102006117 NW_004955468 6251392 6252627 - 102006117 AGCD01051983;GBDF01085640;XR_263393 MODEL 8841458 protein-coding Ccdc179 coiled-coil domain containing 179 NW_004955476 3243974 3250305 - 102011113 AGCD01055240;GBDK01356477;XM_005401737 XP_005401794 MODEL 8713381 ncrna LOC102012343 uncharacterized LOC102012343 NW_004955427 8525675 8532142 - 102012343 AGCD01027075;GBDF01226078;XR_261241 MODEL 8807323 protein-coding Flt1 fms related receptor tyrosine kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel morphogenesis (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN axitinib pharmacodynamics pathway; bevacizumab pharmacodynamics pathway; glypican signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955497 7653309 7831737 - 102006932 AGCD01062681;AGCD01062682;GBDK01093188;XM_005406358;XM_005406359;XM_005406360 XP_005406415;XP_005406416;XP_005406417 MODEL 8715454 protein-coding Akap1 A-kinase anchoring protein 1 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); apoptotic process (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955451 5756648 5787617 - 102010655 AGCD01043175;AGCD01043176;GBCE01114894;XM_005394060;XM_013519400;XM_013519401;XM_013519402 XP_005394117;XP_013374854;XP_013374855;XP_013374856 MODEL 8830704 pseudo LOC102013868 transmembrane protein 53 pseudogene NW_004955437 4200050 4200989 - 102013868 AGCD01034362 MODEL 9032164 ncrna LOC102005036 uncharacterized LOC102005036 NW_004955416 8146068 8156513 + 102005036 AGCD01017033;AGCD01017034;GBCQ01153475;XR_001233315;XR_260366 MODEL 8886836 protein-coding Sh3pxd2b SH3 and PX domains 2B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); cranial skeletal system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); angle-closure glaucoma (ortholog); Animal Disease Models (ortholog); FOUND IN cytoplasm (ortholog); podosome (ortholog) NW_004955408 25103278 25169934 - 102025876 AGCD01008630;GBCE01104618;XM_013509338 XP_013364792 MODEL 9019231 protein-coding LOC102003265 ankyrin repeat domain-containing protein 26-like NW_004955510 3513464 3597054 + 102003265 AGCD01066239;AGCD01066240;AGCD01066241;AGCD01066242;GBDF01123488;XM_005407878 XP_005407935 MODEL 8762880 protein-coding Actl6a actin like 6A ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blastocyst formation (ortholog); chromatin remodeling (ortholog); nervous system development (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; INO80 family mediated chromatin remodeling pathway; pancreatic cancer pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); asthma (ortholog); FOUND IN Ino80 complex (ortholog); npBAF complex (ortholog); NuA4 histone acetyltransferase complex (ortholog) NW_004955420 8745390 8764993 + 102012436 AGCD01020731;AGCD01020732;GBDF01053206;XM_005383042;XM_013513572 XP_005383099;XP_013369026 MODEL 9054182 protein-coding LOC102007228 olfactory receptor 1L8-like NW_004955419 5406757 5407689 - 102007228 AGCD01019806;XM_005382527 XP_005382584 MODEL 9001101 protein-coding Esm1 endothelial cell specific molecule 1 ENCODES a protein that exhibits hepatocyte growth factor receptor binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of hepatocyte growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Liver Neoplasms (ortholog); stomach cancer (ortholog) NW_004955446 12644220 12665351 + 102021812 AGCD01040239;GBBH01086228;XM_005392712 XP_005392769 MODEL 8769579 ncrna LOC102007609 uncharacterized LOC102007609 NW_004955450 683168 685850 - 102007609 AGCD01042342;GBCQ01139779;XR_262512 MODEL 8723354 ncrna LOC102010324 uncharacterized LOC102010324 NW_004955403 1876109 1880828 - 102010324 AGCD01001726;GBCQ01179100;XR_259132 MODEL 8947780 pseudo LOC102022595 zinc finger protein 606-like NW_004955416 31745756 31749064 - 102022595 AGCD01017769 MODEL 8799736 pseudo LOC102004331 N-formyl peptide receptor 2-like NW_004955558 710555 711378 - 102004331 AGCD01073385 MODEL 8749942 protein-coding Pms2 PMS1 homolog 2, mismatch repair system component ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA binding (ortholog); MutSalpha complex binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); meiotic mismatch repair (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN MutLalpha complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955460 13762854 13791462 + 102023443 AGCD01048722;AGCD01048723;GBDF01225942;XM_005397895;XM_013521160 XP_005397952;XP_013376614 MODEL 8960611 ncrna LOC102011946 uncharacterized LOC102011946 NW_004955452 12789670 12791076 - 102011946 AGCD01044366;GBDF01032085;XR_262681 MODEL 8760889 protein-coding Adipor2 adiponectin receptor 2 ENCODES a protein that exhibits adipokinetic hormone receptor activity (ortholog); adiponectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to fatty acid (ortholog); female pregnancy (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-associated liver disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955454 4243898 4327255 + 102025869 AGCD01045119;AGCD01045120;AGCD01045121;GBBH01142646;XM_005395954 XP_005396011 MODEL 39134130 misc_rna 7SK 7SK RNA 9063866 protein-coding Cltc clathrin heavy chain ENCODES a protein that exhibits ankyrin binding (ortholog); clathrin light chain binding (ortholog); disordered domain specific binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; FasL mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); atrial heart septal defect (ortholog); FOUND IN clathrin coat (ortholog); clathrin complex (ortholog); clathrin-coated pit (ortholog) NW_004955451 3380304 3445973 - 102013895 AGCD01043053;AGCD01043054;GBDI01020316;XM_005393983;XM_005393984 XP_005394040;XP_005394041 MODEL 8771179 ncrna LOC102018535 uncharacterized LOC102018535 NW_004955443 7145804 7158741 + 102018535 AGCD01038273;GBDJ01214408;XR_001235482;XR_001235483 MODEL 8750770 protein-coding Prpf4 pre-mRNA splicing tri-snRNP complex factor PRPF4 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN Cajal body (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955419 14190146 14206086 - 102025798 AGCD01020013;GBDF01190621;XM_005382685 XP_005382742 MODEL 8874476 protein-coding LOC102009926 chromosome unknown open reading frame, human C12orf57 INVOLVED IN camera-type eye morphogenesis (ortholog); cognition (ortholog); corpus callosum morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog) NW_004955413 4524236 4525760 + 102009926 AGCD01013621;GBDI01019226;XM_005378850 XP_005378907 MODEL 8766111 trna trnS2(tga) tRNA-Ser MT 6876 6944 - 15822205 8718955 protein-coding Dao D-amino acid oxidase ENCODES a protein that exhibits D-amino-acid dehydrogenase activity (ortholog); D-amino-acid oxidase activity (ortholog); FAD binding (ortholog); INVOLVED IN amino acid catabolic process (ortholog); antibacterial humoral response (ortholog); D-alanine catabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955455 10095597 10127244 + 102028267 AGCD01045938;AGCD01045939;AGCD01045940;AGCD01045941;AGCD01045942;AGCD01045943;AGCD01045944;AGCD01045945;GBDF01299326;XM_005396478 XP_005396535 MODEL 39131780 rrna 5S_rRNA 5S ribosomal RNA 9014804 protein-coding Rumy1 regulator of UNG2 and MKLN1 interacting yippee protein 1 INVOLVED IN positive regulation of apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955406 41788278 41801141 - 102017629 AGCD01006692;GBDF01115968;XM_005375387;XM_013523086 XP_005375444;XP_013378540 MODEL 8719673 protein-coding Slc4a2 solute carrier family 4 member 2 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); enzyme binding (ortholog); INVOLVED IN amelogenesis (ortholog); chloride transport (ortholog); digestive tract development (ortholog); ASSOCIATED WITH Alkalosis (ortholog); Autosomal Recessive Osteopetrosis 9 (ortholog); autosomal recessive polycystic kidney disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) NW_004955491 5498472 5513389 + 102030539 AGCD01060485;GBDJ01004266;XM_005404810;XM_005404811;XM_013504586 XP_005404867;XP_005404868;XP_013360040 MODEL 8836856 protein-coding Rergl RERG like ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 14324734 14334992 - 102010353 AGCD01014040;GBDJ01387403;XM_005379035;XM_005379036 XP_005379092;XP_005379093 MODEL 8706071 protein-coding Cdca5 cell division cycle associated 5 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN double-strand break repair (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955422 20114565 20129679 + 102017464 AGCD01023066;GBDK01415409;XM_005384519;XM_005384521;XM_013514192;XM_013514193;XM_013514194;XR_001233977;XR_001233978 XP_005384576;XP_005384578;XP_013369646;XP_013369647;XP_013369648 MODEL 8845116 protein-coding LOC102018539 zinc finger protein 33B-like NW_004955445 10896408 10911266 + 102018539 AGCD01039680;GBDF01291239;XM_005392376 XP_005392433 MODEL 9038957 protein-coding Atp2b3 ATPase plasma membrane Ca2+ transporting 3 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); PDZ domain binding (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); neural retina development (ortholog); regulation of cytosolic calcium ion concentration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); parallel fiber (ortholog) NW_004955580 286092 332657 + 102011378 AGCD01075594;AGCD01075595;AGCD01075596;GBCB01000157;XM_013509708;XM_013509709;XM_013509710 XP_013365162;XP_013365163;XP_013365164 MODEL 9046476 protein-coding Lrpap1 LDL receptor related protein associated protein 1 ENCODES a protein that exhibits lipase binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); receptor antagonist activity (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); negative regulation of amyloid-beta clearance (ortholog); negative regulation of receptor internalization (ortholog); PARTICIPATES IN Hedgehog signaling pathway; Reelin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cell surface (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum (ortholog) NW_004955514 2195228 2208258 - 102004961 AGCD01067075;GBCE01007107;XM_005408765 XP_005408822 MODEL 8821776 ncrna LOC102006121 uncharacterized LOC102006121 NW_004955470 11481867 11487499 + 102006121 AGCD01052889;XR_263505 MODEL 8777760 ncrna LOC102014263 uncharacterized LOC102014263 NW_004955425 3158459 3207750 - 102014263 AGCD01025281;AGCD01025282;GBDF01056331;XR_261122 MODEL 8820151 protein-coding Cgrrf1 cell growth regulator with ring finger domain 1 INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleoplasm (ortholog) NW_004955409 8939793 8966351 - 102003736 AGCD01009426;GBDJ01421140;XM_005376766;XM_005376767 XP_005376823;XP_005376824 MODEL 8706098 protein-coding Ccdc18 coiled-coil domain containing 18 INVOLVED IN positive regulation of adipose tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriolar satellite (ortholog) NW_004955423 1357515 1423094 - 102019613 AGCD01023433;AGCD01023434;GBDF01187769;XM_013514360 XP_013369814 MODEL 8876558 protein-coding Cabp2 calcium binding protein 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN sensory perception of sound (ortholog); visual perception (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive nonsyndromic deafness 93 (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955422 17967313 17972468 + 102013306 AGCD01022933;XM_005384309;XM_005384310 XP_005384366;XP_005384367 MODEL 8989934 protein-coding Impact impact RWD domain protein ENCODES a protein that exhibits actin binding (ortholog); protein sequestering activity (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955402 12752748 12781238 + 102010754 AGCD01000403;GBCB01110995;XM_005372721;XM_013504956 XP_005372778;XP_013360410 MODEL 8968829 protein-coding Abhd15 abhydrolase domain containing 15 INVOLVED IN adipose tissue development (ortholog); lipid catabolic process (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955481 3686900 3691384 + 102010259 AGCD01056913;GBDJ01136395;XM_005402677 XP_005402734 MODEL 8811398 protein-coding Apaf1 apoptotic peptidase activating factor 1 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cardiac muscle cell apoptotic process (ortholog); cell differentiation (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN apoptosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 34619780 34693616 + 102018463 AGCD01005380;AGCD01005381;AGCD01005382;GBBH01172252;GBDF01305895;XM_013518590;XM_013518592 XP_013374044;XP_013374046 MODEL 8848216 ncrna LOC102013870 uncharacterized LOC102013870 NW_004955438 12906410 12911495 - 102013870 AGCD01035275;GBDF01162314;XR_001235129;XR_261929 MODEL 9005366 protein-coding Arhgap40 Rho GTPase activating protein 40 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955445 18099490 18121225 - 102005192 AGCD01039898;GBDF01093939;XM_013518245 XP_013373699 MODEL 8820757 protein-coding Brms1l BRMS1 like transcriptional repressor ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955409 25286312 25319557 - 102027153 AGCD01010110;AGCD01010111;AGCD01010112;GBDI01025327;XM_005376913 XP_005376970 MODEL 9010377 ncrna LOC102011095 uncharacterized LOC102011095 NW_004955463 784664 786273 + 102011095 AGCD01049497;GBDF01014364;XR_263139 MODEL 39131650 rrna 5S_rRNA 5S ribosomal RNA 8819623 protein-coding Wls Wnt ligand secretion mediator ENCODES a protein that exhibits identical protein binding (ortholog); mu-type opioid receptor binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cementum mineralization (ortholog); exocrine pancreas development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Zaki syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955423 23374401 23465308 + 102013625 AGCD01024005;GBDK01002213;XM_005385271 XP_005385328 MODEL 39131980 rrna 5S_rRNA 5S ribosomal RNA 8946223 ncrna LOC102003268 uncharacterized LOC102003268 NW_004955431 22677734 22698546 + 102003268 AGCD01030517;AGCD01030518;GBDF01235025;XR_001234627;XR_261493 MODEL 9032684 protein-coding Ccdc180 coiled-coil domain containing 180 ASSOCIATED WITH pneumoconiosis (ortholog) NW_004955419 28002063 28066145 - 102026427 AGCD01020453;GBBH01143208;XM_005382852;XM_005382853;XM_013513250;XM_013513251 XP_005382909;XP_005382910;XP_013368704;XP_013368705 MODEL 8711089 protein-coding Angpt2 angiopoietin 2 ENCODES a protein that exhibits receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ regeneration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); adenocarcinoma (ortholog); alcohol-associated liver disease (ortholog); FOUND IN cell projection (ortholog); extracellular region (ortholog) NW_004955403 54139823 54193740 + 102009568 AGCD01003089;GBCQ01175373;XM_005373846 XP_005373903 MODEL 8862710 protein-coding Cenpm centromere protein M ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN inner kinetochore (ortholog) NW_004955413 27349283 27360052 - 102027395 AGCD01014503;GBCQ01091357;XM_005379379;XM_005379381;XM_005379382;XM_013511269;XM_013511270 XP_005379436;XP_005379438;XP_005379439;XP_013366723;XP_013366724 MODEL 8897081 pseudo LOC102007231 ubiquitin-40S ribosomal protein S27a-like NW_004955484 7752603 7753800 - 102007231 AGCD01058345 MODEL 39133995 misc_rna 7SK 7SK RNA 9019379 protein-coding LOC102013545 olfactory receptor 12-like NW_004955542 1216378 1219233 - 102013545 AGCD01071494;AGCD01071495;XM_005411243 XP_005411300 MODEL 9058377 pseudo LOC102004694 tubulin alpha chain-like NW_004955470 11493665 11502589 + 102004694 AGCD01052889 MODEL 9051425 protein-coding Espl1 extra spindle pole bodies like 1, separase ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); separase-securin complex (ortholog) NW_004955458 530269 553919 + 102017308 AGCD01047132;AGCD01047133;GBDF01082490;XM_005397164;XM_005397165;XM_005397166;XM_005397167 XP_005397221;XP_005397222;XP_005397223;XP_005397224 MODEL 8953536 protein-coding LOC102009133 vomeronasal type-1 receptor 4-like NW_004955603 230078 230680 + 102009133 AGCD01076823;XM_005414842 XP_005414899 MODEL 9065668 pseudo LOC102012344 protein AMN1 homolog pseudogene NW_004955505 4070700 4071337 + 102012344 AGCD01065083;XR_264308 MODEL 8809165 pseudo LOC102011948 NF-kappa-B inhibitor-interacting Ras-like protein 1 NW_004955453 11424663 11425286 - 102011948 AGCD01044807 MODEL 8708415 protein-coding Pmvk phosphomevalonate kinase ENCODES a protein that exhibits ATP binding (ortholog); phosphomevalonate kinase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); geranylgeranyl diphosphate biosynthetic process (ortholog); isopentenyl diphosphate biosynthetic process, mevalonate pathway (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) NW_004955545 1421562 1440038 - 102015153 AGCD01071854;AGCD01071855;GBCB01025659;XM_005411529;XM_013508335 XP_005411586;XP_013363789 MODEL 8800621 protein-coding Dnajc16 DnaJ heat shock protein family (Hsp40) member C16 INVOLVED IN regulation of autophagosome size (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955527 2576861 2609925 - 102011801 AGCD01069453;AGCD01069454;AGCD01069455;GBCE01183033;XM_005409868;XM_005409869;XM_005409870;XM_013507424 XP_005409925;XP_005409926;XP_005409927;XP_013362878 MODEL 8816520 protein-coding Akap10 A-kinase anchoring protein 10 ENCODES a protein that exhibits protein kinase A binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955467 919207 990753 - 102008609 AGCD01051242;AGCD01051243;AGCD01051244;GBDI01297241;XM_005399292;XM_013522190 XP_005399349;XP_013377644 MODEL 8991423 pseudo LOC102005039 R-spondin-3 pseudogene NW_004955479 254149 254962 + 102005039 AGCD01056180 MODEL 8966086 pseudo LOC102014264 ribosome biogenesis protein BRX1 homolog NW_004955502 5831939 5852642 + 102014264 AGCD01064380 MODEL 730469078 misc_rna DAOA-AS1_1 DAOA antisense RNA 1 conserved region 1 8865540 protein-coding Prpf40a pre-mRNA processing factor 40A ENCODES a protein that exhibits proline-rich region binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear matrix (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955440 18083838 18128701 - 102008770 AGCD01036595;AGCD01036596;GBCE01097815;GBDI01081076;XM_005390816 XP_005390873 MODEL 8916741 protein-coding Actl6b actin like 6B INVOLVED IN chromatin remodeling (ortholog); dendrite development (ortholog); nervous system development (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN nBAF complex (ortholog); nucleus (ortholog); SWI/SNF complex (ortholog) NW_004955573 259133 272043 + 102016961 AGCD01074971;AGCD01074972;GBDF01116752;XM_005413703 XP_005413760 MODEL 8739986 protein-coding Sp3 Sp3 transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); definitive hemopoiesis (ortholog); embryonic camera-type eye morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Facial Asymmetry (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955449 1347781 1404368 + 102008905 AGCD01041796;AGCD01041797;AGCD01041798;AGCD01041799;AGCD01041800;GBBH01098526;XM_005393193 XP_005393250 MODEL 8799605 protein-coding Slc4a3 solute carrier family 4 member 3 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); enzyme binding (ortholog); INVOLVED IN bicarbonate transport (ortholog); cardiac conduction (ortholog); pH reduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955453 13846444 13859707 - 102028157 AGCD01044854;GBCE01154397;XM_005395505;XM_005395506;XM_005395507;XM_013519939;XM_013519940 XP_005395562;XP_005395563;XP_005395564;XP_013375393;XP_013375394 MODEL 8841602 ncrna LOC102018544 uncharacterized LOC102018544 NW_004955577 464682 467971 + 102018544 AGCD01075396;GBCQ01030476;XR_265080 MODEL 8970058 protein-coding LOC102008379 zinc finger protein 454 NW_004955408 1440967 1461815 - 102008379 AGCD01007959;GBBH01113383;XM_013507982;XM_013507985 XP_013363436;XP_013363439 MODEL 39131651 rrna 5S_rRNA 5S ribosomal RNA 8831642 pseudo LOC102022596 zinc finger protein 649 pseudogene NW_004955479 7209599 7211237 + 102022596 AGCD01056403 MODEL 39134131 misc_rna 7SK 7SK RNA 8721050 pseudo LOC102009927 centrin-3 pseudogene NW_004955467 10028525 10029023 + 102009927 AGCD01051543 MODEL 8806302 protein-coding Lrpprc leucine rich pentatricopeptide repeat containing ENCODES a protein that exhibits actin filament binding (ortholog); beta-tubulin binding (ortholog); mRNA binding (ortholog); INVOLVED IN mitochondrial mRNA polyadenylation (ortholog); negative regulation of mitochondrial mRNA catabolic process (ortholog); negative regulation of mitochondrial RNA catabolic process (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN condensed nuclear chromosome (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955441 11012910 11116965 - 102029009 AGCD01037100;GBCB01022369;XM_013517542 XP_013372996 MODEL 9039717 protein-coding Ccdc181 coiled-coil domain containing 181 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN manchette assembly (ortholog); sperm flagellum assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); manchette (ortholog) NW_004955462 7820176 7838931 + 102013700 AGCD01049309;GBDF01010334;XM_005398195;XM_005398198;XM_005398199;XM_005398200;XM_013521404;XM_013521406 XP_005398252;XP_005398255;XP_005398256;XP_005398257;XP_013376858;XP_013376860 MODEL 39131781 rrna 5S_rRNA 5S ribosomal RNA 9061320 protein-coding Rundc1 RUN domain containing 1 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955451 16777348 16784876 + 102003510 AGCD01043706;AGCD01043707;GBCE01186563;GBDI01219560;XM_013519241 XP_013374695 MODEL 8781290 protein-coding Cltcl1 clathrin heavy chain like 1 INVOLVED IN mitotic cell cycle (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); receptor-mediated endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); coated vesicle (ortholog) NW_004955442 18688019 18803458 + 102010205 AGCD01038014;AGCD01038015;AGCD01038016;AGCD01038017;AGCD01038018;AGCD01038019;GBCB01006220;XM_005391782;XM_005391783;XM_005391784;XM_005391785;XM_013517955 XP_005391839;XP_005391840;XP_005391841;XP_005391842;XP_013373409 MODEL 9048541 protein-coding Sh3rf1 SH3 domain containing ring finger 1 ENCODES a protein that exhibits MAP kinase scaffold activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); neuron migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog) NW_004955403 36989509 37141188 + 102006972 AGCD01002558;AGCD01002559;AGCD01002560;AGCD01002561;AGCD01002562;GBDF01253018;GBDI01325736;XM_013513376 XP_013368830 MODEL 8858682 pseudo LOC102013871 olfactory receptor 12-like NW_004955542 1252343 1253122 - 102013871 AGCD01071498 MODEL 8913903 protein-coding B4galt3 beta-1,4-galactosyltransferase 3 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); galactosyltransferase activity (ortholog); N-acetyllactosamine synthase activity (ortholog); INVOLVED IN glucosylceramide metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955468 12934521 12945435 - 102004919 AGCD01052193;GBDF01248735;XM_005400263;XM_013522353;XM_013522354;XM_013522355 XP_005400320;XP_013377807;XP_013377808;XP_013377809 MODEL 8999441 protein-coding Cdca7 cell division cycle associated 7 ENCODES a protein that exhibits hemi-methylated DNA-binding (ortholog); INVOLVED IN regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); immunodeficiency-centromeric instability-facial anomalies syndrome 3 (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955449 1912125 1923026 - 102010320 AGCD01041816;GBDJ01163685;XM_005393197;XM_005393198;XM_005393200 XP_005393254;XP_005393255;XP_005393257 MODEL 8944889 protein-coding Impdh1 inosine monophosphate dehydrogenase 1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); GMP biosynthetic process (ortholog); lymphocyte proliferation (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955479 9388241 9406717 - 102026109 AGCD01056463;AGCD01056464;GBCE01009782;XM_005402371 XP_005402428 MODEL 9061456 protein-coding LOC102010328 putative tripartite motif-containing protein 64C NW_004955790 9857 10650 + 102010328 AGCD01078353;XM_013510192 XP_013365646 MODEL 9066639 protein-coding Abhd16a abhydrolase domain containing 16A, phospholipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN monoacylglycerol catabolic process (ortholog); phosphatidylserine catabolic process (ortholog); prostaglandin catabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955437 227407 241702 - 102020953 AGCD01034111;AGCD01034112;GBDI01070349;XM_005389356;XM_005389357;XM_013516848;XM_013516849;XM_013516850 XP_005389413;XP_005389414;XP_013372302;XP_013372303;XP_013372304 MODEL 9042862 ncrna LOC102003269 uncharacterized LOC102003269 NW_004955515 5580629 5582659 - 102003269 AGCD01067363;AGCD01067364;GBDJ01129228;XR_264529 MODEL 39133996 misc_rna 7SK 7SK RNA 8786843 protein-coding Adissp adipose secreted signaling protein ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN extracellular region (ortholog) NW_004955415 14596522 14610181 - 102029737 AGCD01016300;GBCB01043999;XM_005380801 XP_005380858 MODEL 9029785 pseudo LOC102004696 V-type proton ATPase subunit F pseudogene NW_004955414 25610808 25611315 + 102004696 AGCD01015615;XM_005380431 MODEL 8818665 pseudo LOC102012345 coiled-coil domain-containing protein 169-like NW_004955427 322526 326614 + 102012345 AGCD01026827 MODEL 8813441 ncrna LOC102008387 uncharacterized LOC102008387 NW_004955410 24882847 24896816 + 102008387 AGCD01011136;GBDK01431851;XR_001232709 MODEL 8811681 protein-coding Angptl1 angiopoietin like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 18160164 18224822 - 102025319 AGCD01006023;AGCD01006024;GBDK01229909;XM_005374936;XM_005374937;XM_005374938;XM_013521102 XP_005374993;XP_005374994;XP_005374995;XP_013376556 MODEL 8916616 pseudo LOC102009135 cyclin-G1 pseudogene NW_004955647 79945 80944 + 102009135 AGCD01077761 MODEL 8931538 protein-coding Resf1 retroelement silencing factor 1 ENCODES a protein that exhibits histone methyltransferase binding (ortholog); INVOLVED IN response to bacterium (ortholog); transposable element silencing by heterochromatin formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955505 3684848 3709624 - 102011340 AGCD01065047;GBDJ01085100;XM_005407130;XM_005407131;XM_013505939 XP_005407187;XP_005407188;XP_013361393 MODEL 8945721 ncrna LOC102011096 uncharacterized LOC102011096 NW_004955463 13120267 13130733 + 102011096 AGCD01049861;GBBH01212613;XR_001236627 MODEL 8971443 ncrna LOC102004333 uncharacterized LOC102004333 NW_004955559 1812453 1815477 - 102004333 AGCD01073670;GBDK01430414;XR_265003 MODEL 8775555 protein-coding Arhgap42 Rho GTPase activating protein 42 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of Rho protein signal transduction (ortholog); negative regulation of systemic arterial blood pressure (ortholog); negative regulation of vascular associated smooth muscle contraction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955412 4367369 4601653 + 102007095 AGCD01012596;AGCD01012597;AGCD01012598;GBBH01193440;GBCQ01001044;XM_005377961 XP_005378018 MODEL 8780812 protein-coding Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calmodulin binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955406 39552034 39645694 + 102013048 AGCD01006631;AGCD01006632;GBBH01025079;XM_005375268;XM_005375269;XM_005375270;XM_013522622;XM_013522634 XP_005375325;XP_005375326;XP_005375327;XP_013378076;XP_013378088 MODEL 8993982 protein-coding LOC102008784 leukocyte immunoglobulin-like receptor subfamily A member 2 NW_004955567 1128512 1147473 + 102008784 AGCD01074460;GBDK01141152;XM_013509292;XM_013509293;XM_013509294;XM_013509295;XM_013509296;XM_013509297;XM_013509298;XM_013509299;XR_001232407 XP_013364746;XP_013364747;XP_013364748;XP_013364749;XP_013364750;XP_013364751;XP_013364752;XP_013364753 MODEL 8817190 pseudo LOC102006123 short/branched chain specific acyl-CoA dehydrogenase, mitochondrial pseudogene NW_004955415 14660369 14661840 - 102006123 AGCD01016304 MODEL 9007829 protein-coding LOC102013554 olfactory receptor 4L1-like NW_004955550 104998 126818 - 102013554 AGCD01072481;AGCD01072482;XM_005412028 XP_005412085 MODEL 8710499 ncrna LOC102007232 uncharacterized LOC102007232 NW_004955484 9389101 9390143 - 102007232 AGCD01058415;GBDF01039018;XR_001231046 MODEL 8868452 protein-coding Cenpn centromere protein N ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN inner kinetochore (ortholog); nucleoplasm (ortholog) NW_004955522 3801856 3818675 + 102028329 AGCD01068398;GBDF01120914;XM_005409347;XM_005409348 XP_005409404;XP_005409405 MODEL 8906302 protein-coding Wnk1 WNK lysine deficient protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN Erk5 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GABA-ergic synapse (ortholog) NW_004955454 6228492 6358690 - 102007507 AGCD01045225;AGCD01045226;AGCD01045227;AGCD01045228;AGCD01045229;AGCD01045230;GBDI01065217;XM_005395988;XM_005395991;XM_005395992;XM_005395993;XM_005395994;XM_005395996;XM_005395997;XM_005395999;XM_005396003;XM_013520148;XM_013520149;XM_013520150;XM_013520151;XM_013520152;XM_013520153;XM_013520155;XM_013520156;XM_013520157 XP_005396045;XP_005396048;XP_005396049;XP_005396050;XP_005396051;XP_005396053;XP_005396054;XP_005396056;XP_005396060;XP_013375602;XP_013375603;XP_013375604;XP_013375605;XP_013375606;XP_013375607;XP_013375609;XP_013375610;XP_013375611 MODEL 8987116 protein-coding Ch25h cholesterol 25-hydroxylase ENCODES a protein that exhibits cholesterol 25-hydroxylase activity (ortholog); steroid hydroxylase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); cholesterol metabolic process (ortholog); negative regulation of cholesterol metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955425 3763302 3764432 + 102018413 AGCD01025297;GBBH01026526;XM_005385856 XP_005385913 MODEL 8888469 protein-coding Espn espin ENCODES a protein that exhibits actin filament binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); locomotory behavior (ortholog); microvillar actin bundle assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 91 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 28 (ortholog); FOUND IN actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog); brush border (ortholog) NW_004955486 6130190 6156859 - 102025585 AGCD01059108;AGCD01059109;GBDF01000176;GBDF01000177;XM_013504283 XP_013359737 MODEL 8976105 ncrna LOC102011951 uncharacterized LOC102011951 NW_004955455 571092 575802 - 102011951 AGCD01045562;XR_262804;XR_262805 MODEL 39134132 misc_rna 7SK 7SK RNA 8794146 protein-coding Pnck pregnancy up-regulated nonubiquitous CaM kinase ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955580 401411 406663 - 102014842 AGCD01075603;AGCD01075604;GBBH01054212;XM_005414137;XM_005414138;XM_013509673;XM_013509675 XP_005414194;XP_005414195;XP_013365127;XP_013365129 MODEL 8915945 ncrna LOC102005041 uncharacterized LOC102005041 NW_004955417 3384305 3386148 + 102005041 AGCD01017913;GBDF01093683;XR_260458 MODEL 8857460 protein-coding LOC102004703 leucine-rich repeat-containing protein 48 NW_004955478 11265115 11298661 - 102004703 AGCD01056165;AGCD01056166;GBBH01117002;GBDJ01386727;XM_013503219 XP_013358673 MODEL 8925021 pseudo LOC102014268 dnaJ homolog subfamily A member 1 pseudogene NW_004955428 10510547 10511683 - 102014268 AGCD01027868 MODEL 730468935 misc_rna DAOA-AS1_2 DAOA antisense RNA 1 conserved region 2 8819228 protein-coding Lrr1 leucine rich repeat protein 1 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nucleus (ortholog) NW_004955409 13039029 13048038 - 102003097 AGCD01009587;GBDF01305385;XM_005376844;XM_005376845;XM_005376846 XP_005376901;XP_005376902;XP_005376903 MODEL 8855233 protein-coding Ccdc182 coiled-coil domain containing 182 INVOLVED IN female gonad development (ortholog) NW_004955451 5216761 5218204 + 102006854 AGCD01043166;GBDF01002175;XM_005394048 XP_005394105 MODEL 8863133 protein-coding Rundc3a RUN domain containing 3A INVOLVED IN cGMP metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955451 17348822 17352271 + 102006736 AGCD01043743;GBDF01014728;GBDK01247607;XM_013519260 XP_013374714 MODEL 39131981 rrna 5S_rRNA 5S ribosomal RNA 9058658 protein-coding Cltrn collectrin, amino acid transport regulator ENCODES a protein that exhibits protein homodimerization activity (ortholog); transporter activator activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); calcium-ion regulated exocytosis (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955519 2522154 2569722 + 102014702 AGCD01067936;AGCD01067937;GBCE01101633;XM_005409160;XM_005409161;XM_013507008;XM_013507009;XM_013507010 XP_005409217;XP_005409218;XP_013362462;XP_013362463;XP_013362464 MODEL 39131417 protein-coding SP3 Sp3 transcription factor 8949221 trna trnT(tgt) tRNA-Thr MT 15303 15370 + 15822215 8942112 protein-coding Cdca7l cell division cycle associated 7 like INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955410 24353024 24366987 - 102005680 AGCD01011126;GBBH01051851;GBDI01216639;XM_013510578;XM_013510579;XM_013510580 XP_013366032;XP_013366033;XP_013366034 MODEL 39131652 rrna 5S_rRNA 5S ribosomal RNA 8939669 pseudo LOC102018549 14-3-3 protein sigma-like NW_004955451 4012131 4013628 + 102018549 AGCD01043087 MODEL 8785654 pseudo LOC102010330 translationally-controlled tumor protein pseudogene NW_004955452 860898 861359 - 102010330 AGCD01043827 MODEL 8803140 protein-coding Slc4a4 solute carrier family 4 member 4 ENCODES a protein that exhibits identical protein binding (ortholog); sodium:bicarbonate symporter activity (ortholog); symporter activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); metanephric proximal tubule development (ortholog); positive regulation of glycolytic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal recessive proximal renal tubular acidosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955447 1599986 1900791 - 102021061 AGCD01040522;AGCD01040523;GBCQ01094065;XM_005392771;XM_005392772;XM_005392773;XM_013518567 XP_005392828;XP_005392829;XP_005392830;XP_013374021 MODEL 8908836 protein-coding Flt3 fms related receptor tyrosine kinase 3 ENCODES a protein that exhibits cytokine receptor activity (ortholog); nuclear glucocorticoid receptor binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955497 7357533 7441215 - 102006150 AGCD01062671;AGCD01062672;AGCD01062673;AGCD01062674;GBBH01210557;GBDI01027559;XM_013505445 XP_013360899 MODEL 8949009 ncrna LOC102022600 uncharacterized LOC102022600 NW_004955419 746130 748094 - 102022600 AGCD01019608;XR_260597 MODEL 8777166 protein-coding Cabp4 calcium binding protein 4 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN photoreceptor cell morphogenesis (ortholog); phototransduction (ortholog); retinal bipolar neuron differentiation (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH achromatopsia (ortholog); congenital stationary night blindness (ortholog); Congenital Stationary Night Blindness 2B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); presynapse (ortholog) NW_004955422 18023639 18028845 - 102018613 AGCD01022935;GBBH01046929;XM_005384330 XP_005384387 MODEL 9038087 pseudo LOC102007611 60 kDa heat shock protein, mitochondrial pseudogene NW_004955402 53200161 53201948 + 102007611 AGCD01001363 MODEL 9060317 protein-coding Akap11 A-kinase anchoring protein 11 ENCODES a protein that exhibits kinase regulator activity (ortholog); protein kinase A catalytic subunit binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); intracellular protein localization (ortholog); positive regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) NW_004955518 4032738 4083720 - 102021381 AGCD01067818;AGCD01067819;AGCD01067820;GBCB01098177;XM_005409104;XM_013506958;XM_013506959;XM_013506960;XM_013506961;XM_013506962 XP_005409161;XP_013362412;XP_013362413;XP_013362414;XP_013362415;XP_013362416 MODEL 8902162 protein-coding Apba1 amyloid beta precursor protein binding family A member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); gamma-aminobutyric acid secretion (ortholog); glutamate secretion (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955434 3384978 3588771 + 102004109 AGCD01032133;AGCD01032134;AGCD01032135;AGCD01032136;GBBH01045926;XM_005388560;XM_013516352;XM_013516353 XP_005388617;XP_013371806;XP_013371807 MODEL 8989933 pseudo LOC102009138 heterogeneous nuclear ribonucleoprotein M pseudogene NW_004955403 28891551 28908137 - 102009138 AGCD01002352 MODEL 9018905 protein-coding Brox BRO1 domain and CAAX motif containing INVOLVED IN mitotic nuclear membrane reassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955520 1797657 1819359 - 102017050 AGCD01068062;GBCQ01127688;XM_005409252;XM_005409253;XM_013507023;XM_013507025;XM_013507026 XP_005409309;XP_005409310;XP_013362477;XP_013362479;XP_013362480 MODEL 8953375 protein-coding Prpf40b pre-mRNA processing factor 40B ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN nuclear body (ortholog) NW_004955547 232286 252922 + 102003384 AGCD01072140;AGCD01072141;GBDF01119507;XM_005411832;XM_005411833;XM_005411834;XM_005411836;XM_013508466 XP_005411889;XP_005411890;XP_005411891;XP_005411893;XP_013363920 MODEL 8738421 protein-coding Resp18 regulated endocrine specific protein 18 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); hypertension (ortholog); renal fibrosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); Golgi lumen (ortholog) NW_004955453 14106430 14111920 + 102008493 AGCD01044858;GBDI01385707;XM_005395532 XP_005395589 MODEL 8735775 pseudo LOC102013873 mortality factor 4-like protein 2 NW_004955439 20947402 20948202 - 102013873 AGCD01036133 MODEL 8763191 protein-coding Actl7a actin like 7A INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH bladder urothelial carcinoma (ortholog); male infertility (ortholog); spermatogenic failure 86 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955419 18102980 18106405 - 102021767 AGCD01020168;GBDF01005069;XM_005382760 XP_005382817 MODEL 39131982 rrna 5S_rRNA 5S ribosomal RNA 9036761 protein-coding Impdh2 inosine monophosphate dehydrogenase 2 ENCODES a protein that exhibits identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); nucleotide binding (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); cellular response to interleukin-4 (ortholog); circadian rhythm (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; mycophenolic acid pharmacokinetics pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955532 1047138 1051980 - 102006279 AGCD01070164;GBDI01080320;XM_005410178;XM_013507582 XP_005410235;XP_013363036 MODEL 8951351 pseudo LOC102008786 coiled-coil domain-containing protein 152-like NW_004955569 1719680 1720876 - 102008786 AGCD01074678 MODEL 39133997 misc_rna 7SK 7SK RNA 8890268 protein-coding Arhgap44 Rho GTPase activating protein 44 ENCODES a protein that exhibits GTPase activator activity (ortholog); phospholipid binding (ortholog); small GTPase binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of filopodium assembly (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute myeloid leukemia (ortholog); cervical cancer (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955467 4428738 4590877 - 102004049 AGCD01051368;AGCD01051369;AGCD01051370;AGCD01051371;AGCD01051372;GBBH01117743;XM_005399741 XP_005399798 MODEL 8716148 ncrna LOC102009929 uncharacterized LOC102009929 NW_004955468 11697494 11712294 + 102009929 AGCD01052137;GBBH01041129;XR_001236933;XR_263414;XR_263415 MODEL 39131653 rrna 5S_rRNA 5S ribosomal RNA 8944601 pseudo LOC102012346 protein FAM184A pseudogene NW_004955428 4406203 4408237 + 102012346 AGCD01027690 MODEL 8768950 protein-coding LOC102011956 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955456 13079418 13133056 - 102011956 AGCD01046578;GBDK01016339;XM_013520498;XM_013520499;XM_013520500;XM_013520502;XM_013520503;XM_013520504;XM_013520505 XP_013375952;XP_013375953;XP_013375954;XP_013375956;XP_013375957;XP_013375958;XP_013375959 MODEL 8751534 protein-coding Espnl espin like ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN stereocilium tip (ortholog) NW_004955542 2430610 2453738 - 102028235 AGCD01071522;GBBH01227849;XM_005411198 XP_005411255 MODEL 8883217 protein-coding Sh3rf2 SH3 domain containing ring finger 2 ENCODES a protein that exhibits phosphatase binding (ortholog); protein phosphatase 1 binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of JNK cascade (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 8024984 8148970 - 102019057 AGCD01016063;AGCD01016064;AGCD01016065;GBCB01038742;XM_005380683;XM_005380684;XM_005380685 XP_005380740;XP_005380741;XP_005380742 MODEL 8746803 protein-coding Adk adenosine kinase ENCODES a protein that exhibits adenosine kinase activity (ortholog); deoxyadenosine kinase activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); AMP salvage (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Hypoxia-Ischemia (ortholog); brain infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955437 17279541 17786140 - 102003281 AGCD01034744;AGCD01034745;AGCD01034746;AGCD01034747;AGCD01034748;AGCD01034749;AGCD01034750;AGCD01034751;AGCD01034752;AGCD01034753;AGCD01034754;AGCD01034755;AGCD01034756;AGCD01034757;AGCD01034758;GBDF01159873;XM_005389928;XM_005389929;XM_013516884 XP_005389985;XP_005389986;XP_013372338 MODEL 730469057 misc_rna DAOA-AS1_2 DAOA antisense RNA 1 conserved region 2 9057127 protein-coding B4galt4 beta-1,4-galactosyltransferase 4 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); N-acetyllactosamine synthase activity (ortholog); UDP-galactosyltransferase activity (ortholog); INVOLVED IN keratan sulfate proteoglycan biosynthetic process (ortholog); lactosylceramide biosynthetic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); high grade glioma (ortholog); Mesothelioma (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955427 18964578 18982090 - 102016176 AGCD01027357;GBDI01354182;GBDK01395918;XM_013515223 XP_013370677 MODEL 9016484 pseudo LOC102004334 zona pellucida sperm-binding protein 2 pseudogene NW_004955443 8434034 8436392 - 102004334 AGCD01038326 MODEL 8755096 protein-coding Ccdc183 coiled-coil domain containing 183 INVOLVED IN centriole assembly (ortholog); cytoplasm organization (ortholog); manchette assembly (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog) NW_004955513 4897359 4904559 + 102023944 AGCD01066943;GBDF01010089;XM_005408555 XP_005408612 MODEL 10309212 protein-coding Abhd16b abhydrolase domain containing 16B ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955528 391749 395181 - 106146221 AGCD01069526;GBDF01083654;XM_013507489 XP_013362943 MODEL 39131782 rrna 5S_rRNA 5S ribosomal RNA 8816438 pseudo LOC102006124 motile sperm domain-containing protein 1 pseudogene NW_004955476 50263 52111 + 102006124 AGCD01055190 MODEL 8779878 pseudo LOC102008390 intraflagellar transport protein 74 homolog pseudogene NW_004955411 1172768 1173854 - 102008390 AGCD01011473 MODEL 39131473 protein-coding CH25H cholesterol 25-hydroxylase 39131983 rrna 5S_rRNA 5S ribosomal RNA 8739935 protein-coding Angptl2 angiopoietin like 2 ASSOCIATED WITH dermatomyositis (ortholog) NW_004955419 1417773 1450199 + 102006664 AGCD01019648;GBDJ01024830;XM_005382438 XP_005382495 MODEL 9019207 protein-coding Cenpo centromere protein O ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN inner kinetochore (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955469 6913438 6933254 + 102030295 AGCD01052399;GBBH01066882;XM_005400396 XP_005400453 MODEL 39134133 misc_rna 7SK 7SK RNA 8707955 protein-coding Flt3lg fms related receptor tyrosine kinase 3 ligand ENCODES a protein that exhibits identical protein binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); dendritic cell differentiation (ortholog); embryonic hemopoiesis (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); colon carcinoma (ortholog); Fanconi anemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955559 1364056 1371245 - 102014503 AGCD01073641;GBBH01091697;XM_013509008;XM_013509009;XM_013509010;XM_013509011;XM_013509012;XM_013509013;XM_013509014;XM_013509015;XM_013509016;XM_013509017 XP_013364462;XP_013364463;XP_013364464;XP_013364465;XP_013364466;XP_013364467;XP_013364468;XP_013364469;XP_013364470;XP_013364471 MODEL 9037437 ncrna LOC102005042 uncharacterized LOC102005042 NW_004955417 24614807 24627073 - 102005042 AGCD01018467;GBDF01305977;XR_001233396 MODEL 8713337 pseudo LOC102011101 HAUS augmin-like complex subunit 6 pseudogene NW_004955467 12349080 12357812 + 102011101 AGCD01051631;XR_263364 MODEL 8827554 protein-coding Pnisr PNN interacting serine and arginine rich protein ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear speck (ortholog) NW_004955411 25270569 25297571 - 102023787 AGCD01012151;GBCB01022118;XM_005377803;XM_005377804;XM_005377805;XM_013510778;XM_013510779;XM_013510780;XM_013510781;XM_013510782 XP_005377860;XP_005377861;XP_005377862;XP_013366232;XP_013366233;XP_013366234;XP_013366235;XP_013366236 MODEL 8784098 protein-coding LOC102004707 putative spermatogenesis-associated protein 31D3 NW_004955417 24627190 24630152 + 102004707 AGCD01018467;GBDF01006014;XM_005381905 XP_005381962 MODEL 8853606 ncrna LOC102014272 uncharacterized LOC102014272 NW_004955431 13595122 13605665 + 102014272 AGCD01030311;GBCE01113209;XR_001234614;XR_001234615 MODEL 8889673 protein-coding Lrrc1 leucine rich repeat containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955411 2189882 2259733 - 102008608 AGCD01011499;AGCD01011500;AGCD01011501;AGCD01011502;AGCD01011503;GBBH01116719;GBCE01115160;XM_013510755 XP_013366209 MODEL 8810204 protein-coding Rundc3b RUN domain containing 3B ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955432 5032468 5186402 + 102026143 AGCD01030755;AGCD01030756;AGCD01030757;AGCD01030758;AGCD01030759;AGCD01030760;AGCD01030761;AGCD01030762;AGCD01030763;AGCD01030764;AGCD01030765;AGCD01030766;AGCD01030767;GBDF01251872;XM_013515918 XP_013371372 MODEL 8992928 protein-coding Dnajc17 DnaJ heat shock protein family (Hsp40) member C17 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); myopia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955416 7620553 7672344 - 102027404 AGCD01016995;AGCD01016996;AGCD01016997;AGCD01016998;AGCD01016999;AGCD01017000;GBDF01158979;XM_005381263;XM_013512569 XP_005381320;XP_013368023 MODEL 8933132 protein-coding Clu clusterin ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP hydrolysis activity (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); cell morphogenesis (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN aggresome (ortholog); apical dendrite (ortholog); cell periphery (ortholog) NW_004955403 50160598 50175876 - 102007076 AGCD01002959;GBDF01127388;XM_005373750;XM_013514284 XP_005373807;XP_013369738 MODEL 8961125 protein-coding Brpf1 bromodomain and PHD finger containing 1 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); common myeloid progenitor cell proliferation (ortholog); neural tube formation (ortholog); ASSOCIATED WITH ankyloglossia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); histone acetyltransferase complex (ortholog) NW_004955561 1260237 1275953 + 102006294 AGCD01073845;GBDF01089085;XM_005413023;XM_005413024;XM_005413025;XM_005413026;XM_005413027;XM_005413028;XM_013509081 XP_005413080;XP_005413081;XP_005413082;XP_005413083;XP_005413084;XP_005413085;XP_013364535 MODEL 8990296 protein-coding Trnt1 tRNA nucleotidyl transferase 1 ENCODES a protein that exhibits CCA tRNA nucleotidyltransferase activity (ortholog); CCACCA tRNA nucleotidyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial tRNA 3'-end processing (ortholog); rescue of stalled cytosolic ribosome (ortholog); tRNA 3'-terminal CCA addition (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955421 10192065 10211527 - 102021249 AGCD01021870;GBBH01037146;XM_005383747;XM_005383748;XM_005383749 XP_005383804;XP_005383805;XP_005383806 MODEL 8899020 pseudo LOC102007233 THAP domain-containing protein 5 pseudogene NW_004955419 22760508 22761334 - 102007233 AGCD01020307 MODEL 8753486 protein-coding Cdca8 cell division cycle associated 8 INVOLVED IN chromosome organization (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromocenter (ortholog); chromosome passenger complex (ortholog); chromosome, centromeric region (ortholog) NW_004955452 15486515 15501838 + 102013470 AGCD01044486;GBDF01085373;XM_005395215;XM_005395216;XM_013519695 XP_005395272;XP_005395273;XP_013375149 MODEL 8894373 protein-coding B4galt5 beta-1,4-galactosyltransferase 5 ENCODES a protein that exhibits N-acetyllactosamine synthase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); ganglioside biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955445 8471684 8559672 + 102004759 AGCD01039595;AGCD01039596;AGCD01039597;AGCD01039598;AGCD01039599;AGCD01039600;AGCD01039601;AGCD01039602;AGCD01039603;GBBH01033957;XM_005392328;XM_013518294;XM_013518295 XP_005392385;XP_013373748;XP_013373749 MODEL 9050909 protein-coding Slc4a5 solute carrier family 4 member 5 ENCODES a protein that exhibits sodium:bicarbonate symporter activity (ortholog); INVOLVED IN cerebrospinal fluid secretion (ortholog); epithelial cell development (ortholog); mitochondrion distribution (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955424 11426020 11537141 + 102003983 AGCD01024566;AGCD01024567;AGCD01024568;GBDF01158181;XM_005385520;XM_005385521;XM_005385522;XM_005385523;XM_013514621 XP_005385577;XP_005385578;XP_005385579;XP_005385580;XP_013370075 MODEL 9019867 pseudo LOC102010333 U1 small nuclear ribonucleoprotein C pseudogene NW_004955453 8264707 8265255 + 102010333 AGCD01044758;XM_005395715 MODEL 8808089 protein-coding Wnk2 WNK lysine deficient protein kinase 2 INVOLVED IN monoatomic ion homeostasis (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955515 4730647 4852920 - 102010615 AGCD01067330;AGCD01067331;GBCB01002306;GBDK01219428;XM_013506886 XP_013362340 MODEL 9001454 ncrna LOC102007612 uncharacterized LOC102007612 NW_004955451 5393479 5395031 - 102007612 AGCD01043166;GBDF01289099;XR_262582 MODEL 9033877 protein-coding Arhgap45 Rho GTPase activating protein 45 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955495 6800988 6815941 - 102012871 AGCD01062097;GBDI01001976;XM_005405997;XM_005405998 XP_005406054;XP_005406055 MODEL 8955719 protein-coding Cabp5 calcium binding protein 5 ASSOCIATED WITH lung cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955609 212176 225415 + 102010011 AGCD01077054;GBDJ01292062;XM_005414924;XM_005414925;XM_005414926;XM_005414927 XP_005414981;XP_005414982;XP_005414983;XP_005414984 MODEL 8964818 protein-coding LOC102009139 phosphatidylcholine transfer protein-like NW_004955451 6915885 6945860 - 102009139 AGCD01043218;AGCD01043219;AGCD01043220;GBDK01010809;XM_013519061 XP_013374515 MODEL 8889589 protein-coding Akap12 A-kinase anchoring protein 12 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955439 10241298 10262416 - 102004008 AGCD01035861;AGCD01035862;GBBH01051193;XM_005390585;XM_013517396 XP_005390642;XP_013372850 MODEL 8885744 protein-coding Apba2 amyloid beta precursor protein binding family A member 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); in utero embryonic development (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); presynapse (ortholog); Schaffer collateral - CA1 synapse (ortholog) NW_004955416 29390601 29591815 - 102014778 AGCD01017655;AGCD01017656;AGCD01017657;GBDJ01028472;XM_005381659;XM_005381660;XM_013512683 XP_005381716;XP_005381717;XP_013368137 MODEL 9061457 protein-coding Atp2c1 ATPase secretory pathway Ca2+ transporting 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); calcium ion transport (ortholog); calcium-dependent cell-cell adhesion (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cis-Golgi network membrane (ortholog); Golgi apparatus (ortholog); Golgi cisterna membrane (ortholog) NW_004955501 7382657 7519789 - 102010386 AGCD01064214;AGCD01064215;AGCD01064216;GBDK01089522;XM_005406844;XM_013505732;XM_013505734 XP_005406901;XP_013361186;XP_013361188 MODEL 8992249 ncrna LOC102003275 uncharacterized LOC102003275 NW_004955435 19660196 19672146 - 102003275 AGCD01033436;GBBH01155403;XR_001234913;XR_001234914;XR_001234915 MODEL 9034222 protein-coding Esr1 estrogen receptor 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); antral ovarian follicle growth (ortholog); baculum development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; follicle-stimulating hormone signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955439 9588631 9953606 - 102028019 AGCD01035840;AGCD01035841;AGCD01035842;AGCD01035843;AGCD01035844;AGCD01035845;AGCD01035846;GBCB01061195;XM_005390573;XM_005390574;XM_013517315 XP_005390630;XP_005390631;XP_013372769 MODEL 8993542 pseudo LOC102013875 40S ribosomal protein S2 pseudogene NW_004955440 4357399 4360937 - 102013875 AGCD01036261;AGCD01036262 MODEL 8750915 pseudo LOC102004336 olfactory receptor 7G1-like NW_004955563 207086 223744 + 102004336 AGCD01074053 MODEL 9018087 protein-coding Impg1 interphotoreceptor matrix proteoglycan 1 INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); esophageal cancer (ortholog); fundus dystrophy (ortholog); FOUND IN gel phase of interstitial matrix (ortholog); interphotoreceptor matrix (ortholog); photoreceptor inner segment (ortholog) NW_004955502 4359071 4502623 - 102013312 AGCD01064334;AGCD01064335;AGCD01064336;AGCD01064337;GBDF01259084;XM_013505815 XP_013361269 MODEL 39133998 misc_rna 7SK 7SK RNA 8758561 protein-coding Actl7b actin like 7B FOUND IN cytoplasm (ortholog) NW_004955419 18106542 18107955 + 102022085 AGCD01020168;GBDF01010361;XM_005382761 XP_005382818 MODEL 8999109 protein-coding Abhd17a abhydrolase domain containing 17A, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); negative regulation of protein localization to microtubule (ortholog); negative regulation of skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN endosome membrane (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955495 6159314 6167429 + 102025024 AGCD01062055;GBDI01062611;XM_005405944;XM_013505273 XP_005406001;XP_013360727 MODEL 8804901 ncrna LOC102008788 uncharacterized LOC102008788 NW_004955446 7907980 7940327 - 102008788 AGCD01040132;AGCD01040133;GBBH01101806;XR_001235659;XR_001235660;XR_001235661;XR_001235662;XR_001235663;XR_262390 MODEL 8891761 pseudo LOC102022603 liver carboxylesterase 2-like NW_004955484 9789580 9816841 - 102022603 AGCD01058431;AGCD01058432 MODEL 8887013 pseudo LOC102006128 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955417 3954110 3955411 - 102006128 AGCD01017933 MODEL 9037669 protein-coding LOC102012347 uncharacterized LOC102012347 NW_004955508 3322424 3325128 + 102012347 AGCD01065806;GBCQ01193228;XM_005407736 XP_005407793 MODEL 8716228 protein-coding LOC102012773 fatty acid-binding protein, liver NW_004955424 624397 629958 + 102012773 AGCD01024188;GBCQ01000092;XM_005385381 XP_005385438 MODEL 8743600 ncrna LOC102011960 uncharacterized LOC102011960 NW_004955459 5331828 5338432 - 102011960 AGCD01048044;XR_263016 MODEL 39131368 protein-coding PRPF6 pre-mRNA processing factor 6 8837334 protein-coding Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog); Notch binding (ortholog); INVOLVED IN glutathione catabolic process (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); trans-Golgi network (ortholog) NW_004955416 7828917 7831368 + 102003019 AGCD01017014;GBDK01117054;XM_005381272 XP_005381329 MODEL 8810629 protein-coding B4galt6 beta-1,4-galactosyltransferase 6 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); ganglioside biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog) NW_004955402 18945013 19024132 - 102018666 AGCD01000543;AGCD01000544;GBCE01061577;GBCE01087318;XM_005372744;XM_013507100;XM_013507170;XM_013507213;XM_013507247 XP_005372801;XP_013362554;XP_013362624;XP_013362667;XP_013362701 MODEL 8844752 protein-coding Sh3rf3 SH3 domain containing ring finger 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of JNK cascade (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955470 12446604 12615689 + 102006652 AGCD01052932;AGCD01052933;AGCD01052934;AGCD01052935;GBDF01142813;XM_005400847 XP_005400904 MODEL 9014263 protein-coding Adm adrenomedullin ENCODES a protein that exhibits adrenomedullin receptor binding (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); androgen metabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; p38 MAPK signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acidoses (ortholog); Albuminuria (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955414 25951473 25953593 + 102004695 AGCD01015635;GBCE01160076;XM_005380275 XP_005380332 MODEL 8732769 pseudo LOC102005043 Golgi apparatus membrane protein TVP23 homolog B pseudogene NW_004955482 7561663 7562789 - 102005043 AGCD01057475 MODEL 8844665 protein-coding Dap death associated protein INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955426 398593 452004 - 102005396 AGCD01026001;AGCD01026002;GBCQ01002216;XM_005386121 XP_005386178 MODEL 8969933 protein-coding Sp4 Sp4 transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of heart contraction (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); bipolar disorder (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955410 23955408 24015667 + 102004910 AGCD01011120;AGCD01011121;GBCB01019139;XM_005377368;XM_005377370 XP_005377425;XP_005377427 MODEL 8785117 protein-coding LOC102014275 coiled-coil domain-containing protein 160-like NW_004955433 1192697 1195183 - 102014275 AGCD01031350;GBDF01044090;XM_005388185;XM_005388186;XM_013516210 XP_005388242;XP_005388243;XP_013371664 MODEL 9045802 protein-coding Ret ret proto-oncogene ENCODES a protein that exhibits calcium ion binding (ortholog); protein tyrosine kinase activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); embryonic epithelial tube formation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); appendicitis (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); early endosome (ortholog) NW_004955546 1221995 1252147 + 102005303 AGCD01072043;AGCD01072044;GBDF01009147;XM_005411762 XP_005411819 MODEL 8946419 protein-coding LOC102009144 complement receptor type 1 NW_004955406 42927757 42997196 + 102009144 AGCD01006720;AGCD01006721;AGCD01006722;AGCD01006723;GBBH01063618;GBCE01049944;XM_013503302 XP_013358756 MODEL 8974572 protein-coding Esr2 estrogen receptor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN amygdala development (ortholog); behavioral fear response (ortholog); brain development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; tamoxifen pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955466 5587003 5644765 + 102004260 AGCD01050885;GBDF01079691;XM_005399136;XM_013521918 XP_005399193;XP_013377372 MODEL 8754969 protein-coding Dnajc18 DnaJ heat shock protein family (Hsp40) member C18 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955418 1119699 1149891 + 102017570 AGCD01018709;AGCD01018710;AGCD01018711;GBDF01085412;XM_005382068;XM_005382069;XM_005382070 XP_005382125;XP_005382126;XP_005382127 MODEL 39131783 rrna 5S_rRNA 5S ribosomal RNA 8961076 protein-coding Cluh CLUH binding protein of NUMT mRNA ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN intracellular distribution of mitochondria (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955481 583554 606566 + 102005376 AGCD01056798;GBDF01161845;XM_005402573;XM_005402574;XM_005402576;XM_013503512;XM_013503513;XM_013503514 XP_005402630;XP_005402631;XP_005402633;XP_013358966;XP_013358967;XP_013358968 MODEL 8923969 protein-coding Atp2c2 ATPase secretory pathway Ca2+ transporting 2 ENCODES a protein that exhibits P-type calcium transporter activity (ortholog); P-type manganese transporter activity (ortholog); INVOLVED IN mammary gland epithelium development (ortholog); positive regulation of calcium ion import (ortholog); protein localization to plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955541 47803 95074 + 102013340 AGCD01071344;AGCD01071345;GBBH01000294;XM_005410958;XM_013507971 XP_005411015;XP_013363425 MODEL 8891365 ncrna LOC102009931 uncharacterized LOC102009931 NW_004955469 1231307 1236093 - 102009931 AGCD01052250;XR_263423 MODEL 8862130 ncrna LOC102007234 uncharacterized LOC102007234 NW_004955485 7286010 7288361 - 102007234 AGCD01058650;GBBH01030082;XR_263917 MODEL 39132511 rrna 5S_rRNA 5S ribosomal RNA 8789854 ncrna LOC102011132 uncharacterized LOC102011132 NW_004955424 5106865 5118485 + 102011132 AGCD01024384;GBDF01016619;XR_261042 MODEL 10311493 ncrna LOC106147407 uncharacterized LOC106147407 NW_004955555 1888854 1891540 - 106147407 AGCD01073111;AGCD01073112;XR_001232303 MODEL 9007062 ncrna LOC102011112 uncharacterized LOC102011112 NW_004955415 26765225 26765881 - 102011112 AGCD01016604;XR_260318 MODEL 8739323 protein-coding LOC102004709 uncharacterized LOC102004709 NW_004955482 1567935 1574274 + 102004709 AGCD01057221;GBDJ01033180;XM_005402995;XR_263820;XR_263821;XR_263822 XP_005403052 MODEL 9031341 ncrna LOC102018551 uncharacterized LOC102018551 NW_004955451 11692981 11705179 - 102018551 AGCD01043363;GBDF01220707;XR_001235941;XR_001235942;XR_262593 MODEL 8758203 protein-coding Pnkd PNKD metallo-beta-lactamase domain containing INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); negative regulation of neurotransmitter secretion (ortholog); neuromuscular process controlling posture (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); choreatic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955453 15030436 15104084 - 102012398 AGCD01044881;AGCD01044882;AGCD01044883;AGCD01044884;AGCD01044885;GBDI01171046;XM_005395654;XM_005395655;XM_005395656;XM_013519933 XP_005395711;XP_005395712;XP_005395713;XP_013375387 MODEL 8985956 protein-coding Ccdc184 coiled-coil domain containing 184 FOUND IN cytoplasm (ortholog) NW_004955500 7051998 7053848 + 102027762 AGCD01063899;GBBH01045922;GBDF01005594;XM_005406646 XP_005406703 MODEL 39131654 rrna 5S_rRNA 5S ribosomal RNA 8943932 protein-coding Brpf3 bromodomain and PHD finger containing 3 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of DNA replication (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog); nucleus (ortholog) NW_004955437 3951160 3985133 + 102005966 AGCD01034358;GBCB01061515;GBCE01141854;XM_005389580 XP_005389637 MODEL 8887040 protein-coding LOC102008392 olfactory receptor 147-like NW_004955412 25370885 25371823 - 102008392 AGCD01013151;XM_005378421 XP_005378478 MODEL 8831349 protein-coding Dap3 death associated protein 3 ENCODES a protein that exhibits GTPase activity (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); mitochondrial translation (ortholog); PARTICIPATES IN Trail mediated signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955545 1951008 1981174 + 102010094 AGCD01071876;GBBH01005546;XM_005411615 XP_005411672 MODEL 39131325 protein-coding IMPG1 interphotoreceptor matrix proteoglycan 1 9032997 protein-coding Angptl3 angiopoietin like 3 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); growth factor activity (ortholog); integrin binding (ortholog); INVOLVED IN acylglycerol homeostasis (ortholog); artery morphogenesis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN lipid metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); familial hypobetalipoproteinemia 2 (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular region (ortholog) NW_004955423 27113378 27121339 - 102010380 AGCD01024115;GBCQ01000094;XM_005385334 XP_005385391 MODEL 9037830 protein-coding Wnk3 WNK lysine deficient protein kinase 3 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); maintenance of blood-brain barrier (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); autistic disorder (ortholog); epilepsy (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955475 1441068 1641599 - 102020660 AGCD01054753;AGCD01054754;AGCD01054755;AGCD01054756;AGCD01054757;GBDF01016694;XM_013502857;XM_013502858;XM_013502859;XM_013502860;XM_013502861 XP_013358311;XP_013358312;XP_013358313;XP_013358314;XP_013358315 MODEL 8786096 protein-coding Cenpp centromere protein P ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN inner kinetochore (ortholog); nucleoplasm (ortholog) NW_004955515 5220257 5448347 - 102028784 AGCD01067343;AGCD01067344;AGCD01067345;AGCD01067346;AGCD01067347;AGCD01067348;AGCD01067349;AGCD01067350;AGCD01067351;AGCD01067352;AGCD01067353;GBDJ01218792;XM_005408912;XM_013506873;XM_013506874 XP_005408969;XP_013362327;XP_013362328 MODEL 8855261 ncrna LOC102007614 uncharacterized LOC102007614 NW_004956066 2115 8161 - 102007614 AGCD01078986;GBDI01339207;XR_001232606;XR_265204 MODEL 8975418 ncrna LOC102009935 uncharacterized LOC102009935 NW_004955471 831025 838931 - 102009935 AGCD01052965;GBDF01265719;XR_263511 MODEL 8806576 protein-coding LOC102012348 ankyrin repeat domain-containing protein 26-like NW_004955429 6598602 6603032 - 102012348 AGCD01028554;XM_013515351 XP_013370805 MODEL 8716014 protein-coding Cabp7 calcium binding protein 7 INVOLVED IN gene expression (ortholog); muscle contraction (ortholog); muscle tissue development (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN trans-Golgi network membrane (ortholog) NW_004955455 3977977 3981646 + 102004561 AGCD01045662;GBDI01161267;XM_005396566 XP_005396623 MODEL 8804781 ncrna LOC102003276 uncharacterized LOC102003276 NW_004955528 1806550 1808282 + 102003276 AGCD01069571;AGCD01069572;XR_001231991 MODEL 8909699 protein-coding Apba3 amyloid beta precursor protein binding family A member 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); in utero embryonic development (ortholog); regulation of gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955495 5647274 5654634 - 102012873 AGCD01062017;AGCD01062018;AGCD01062019;GBCE01170764;GBDI01115253;XM_013505233 XP_013360687 MODEL 8822607 protein-coding Akap13 A-kinase anchoring protein 13 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); MAP kinase scaffold activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); bone development (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); cell cortex (ortholog) NW_004955416 19006206 19327523 - 102014136 AGCD01017414;AGCD01017415;AGCD01017416;AGCD01017417;AGCD01017418;AGCD01017419;AGCD01017420;AGCD01017421;AGCD01017422;GBCE01117069;XM_005381591;XM_013512530;XM_013512531;XM_013512532;XM_013512533;XM_013512534 XP_005381648;XP_013367984;XP_013367985;XP_013367986;XP_013367987;XP_013367988 MODEL 8794491 protein-coding Adm2 adrenomedullin 2 ENCODES a protein that exhibits hormone activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); angiogenesis (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); phlebitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955413 33460975 33469935 + 102028629 AGCD01014670;AGCD01014671;AGCD01014672;GBDF01106640;XM_005379567 XP_005379624 MODEL 9031813 protein-coding LOC102013879 olfactory receptor 4N5-like NW_004955550 250120 251046 - 102013879 AGCD01072489;GBBH01106105;XM_005412029 XP_005412086 MODEL 9017465 trna trnV(tac) tRNA-Val MT 1021 1087 + 15822216 8755219 protein-coding Col5a3 collagen type V alpha 3 chain ENCODES a protein that exhibits heparin binding (ortholog); proteoglycan binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN collagen type V trimer (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955495 1347171 1386683 - 102026991 AGCD01061684;AGCD01061685;GBDI01224741;XM_005405578;XR_001231389 XP_005405635 MODEL 8857611 pseudo LOC102014276 mortality factor 4-like protein 1 pseudogene NW_004955433 8231311 8233189 + 102014276 AGCD01031587 MODEL 39131565 protein-coding CDCP1 CUB domain containing protein 1 39133999 misc_rna 7SK 7SK RNA 9062219 pseudo LOC102009153 stereocilin-like NW_004955409 22950828 22960330 - 102009153 AGCD01010048;AGCD01010049 MODEL 8773304 pseudo LOC102022608 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform pseudogene NW_004955488 3365733 3367870 - 102022608 AGCD01059574;XM_005404459;XM_005404460;XM_005404461 MODEL 8957178 pseudo LOC102008791 alpha-enolase pseudogene NW_004955447 16493351 16494703 + 102008791 AGCD01041088 MODEL 8790087 protein-coding Abhd17b abhydrolase domain containing 17B, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of protein localization to microtubule (ortholog); positive regulation of protein localization to endosome (ortholog); regulation of dendritic spine maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) NW_004955434 1262956 1302877 + 102020481 AGCD01032060;AGCD01032061;GBBH01207117;XM_005388523;XM_005388524;XM_013516341;XM_013516342;XM_013516343;XM_013516344 XP_005388580;XP_005388581;XP_013371795;XP_013371796;XP_013371797;XP_013371798 MODEL 8782359 protein-coding Flt4 fms related receptor tyrosine kinase 4 ENCODES a protein that exhibits growth factor binding (ortholog); protein homodimerization activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); lung alveolus development (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 98995 137922 + 102025873 AGCD01007908;AGCD01007909;GBCE01084871;XM_013507813 XP_013363267 MODEL 8949714 protein-coding Esrp1 epithelial splicing regulatory protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 109 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 10813831 10881238 + 102027070 AGCD01018096;AGCD01018097;AGCD01018098;AGCD01018099;AGCD01018100;AGCD01018101;AGCD01018102;AGCD01018103;AGCD01018104;AGCD01018105;GBCE01186588;GBDI01133147;XM_005381812;XM_005381813;XM_005381816;XM_005381817 XP_005381869;XP_005381870;XP_005381873;XP_005381874 MODEL 8704094 protein-coding Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 INVOLVED IN regulation of cardiolipin metabolic process (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); 3-methylglutaconic aciduria type 5 (ortholog); cervical cancer (ortholog); FOUND IN inner mitochondrial membrane protein complex (ortholog); matrix side of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955420 9974466 9978789 - 102020673 AGCD01020772;GBDI01061774;XM_005383071;XM_005383072 XP_005383128;XP_005383129 MODEL 9032121 protein-coding Chac2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog) NW_004955441 19502389 19509736 + 102029331 AGCD01037348;GBCB01043730;XM_005391020 XP_005391077 MODEL 8706749 protein-coding Prpf8 pre-mRNA processing factor 8 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955481 1499634 1530670 + 102017981 AGCD01056833;AGCD01056834;GBDF01002836;XM_005402612 XP_005402669 MODEL 9063580 ncrna LOC102005050 uncharacterized LOC102005050 NW_004955488 8461648 8536710 - 102005050 AGCD01059713;AGCD01059714;AGCD01059715;AGCD01059716;AGCD01059717;AGCD01059718;GBDF01148383;XR_001231164 MODEL 8978372 protein-coding Sh3tc1 SH3 domain and tetratricopeptide repeats 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955514 2752499 2786067 - 102010399 AGCD01067087;AGCD01067088;GBCE01069521;XM_005408779;XM_013506767;XM_013506768;XM_013506769;XM_013506770 XP_005408836;XP_013362221;XP_013362222;XP_013362223;XP_013362224 MODEL 8901131 protein-coding Runx1 RUNX family transcription factor 1 PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); asthma (ortholog) NW_004955407 34108653 34342657 - 102029935 AGCD01007717;AGCD01007718;AGCD01007719;AGCD01007720;GBBH01187973;XM_005375708;XM_005375710 XP_005375765;XP_005375767 MODEL 8906653 protein-coding Sp5 Sp5 transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); post-anal tail morphogenesis (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) NW_004955449 4076872 4079887 - 102023758 AGCD01041874;GBDJ01193009;XM_005393244 XP_005393301 MODEL 8991702 protein-coding Slc4a7 solute carrier family 4 member 7 ENCODES a protein that exhibits sodium:bicarbonate symporter activity (ortholog); INVOLVED IN auditory receptor cell development (ortholog); camera-type eye photoreceptor cell differentiation (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955430 18991615 19059590 - 102017367 AGCD01029704;GBBH01198258;GBCQ01154648;XM_013515625 XP_013371079 MODEL 8751648 pseudo LOC102006131 polypeptide N-acetylgalactosaminyltransferase 11 pseudogene NW_004955418 29489392 29494643 + 102006131 AGCD01019466;AGCD01019467 MODEL 39131784 rrna 5S_rRNA 5S ribosomal RNA 9065088 pseudo LOC102007239 40S ribosomal protein S7 pseudogene NW_004955421 17106374 17106961 + 102007239 AGCD01022014 MODEL 8721335 protein-coding Actl8 actin like 8 INVOLVED IN epithelial cell differentiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); stomach cancer (ortholog) NW_004955527 1217950 1274453 - 102020702 AGCD01069392;AGCD01069393;AGCD01069394;AGCD01069395;AGCD01069396;GBDF01193552;XM_005409807;XM_005409808 XP_005409864;XP_005409865 MODEL 8976933 pseudo LOC102012779 dynactin subunit 6 pseudogene NW_004955425 21033663 21038693 - 102012779 AGCD01025781 MODEL 9035318 ncrna LOC102011962 uncharacterized LOC102011962 NW_004955410 25402864 25406681 - 102011962 AGCD01011152;GBDF01041224;XR_259864 MODEL 9031999 protein-coding Clul1 clusterin like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog) NW_004955402 9312643 9361358 - 102023757 AGCD01000213;GBDF01192451;XM_005372675;XM_005372676;XM_005372677;XM_005372679;XM_005372680 XP_005372732;XP_005372733;XP_005372734;XP_005372736;XP_005372737 MODEL 39132513 rrna 5S_rRNA 5S ribosomal RNA 8950651 pseudo LOC102008792 F-box/LRR-repeat protein 20 pseudogene NW_004955447 14849540 14851022 - 102008792 AGCD01041022 MODEL 8782346 protein-coding Lrrc10 leucine rich repeat containing 10 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoskeleton (ortholog); mitochondrion (ortholog); myofibril (ortholog) NW_004955405 9908866 9910375 - 102025649 AGCD01004799;XM_005374302 XP_005374359 MODEL 8908957 ncrna LOC102011133 uncharacterized LOC102011133 NW_004955496 4331938 4345273 + 102011133 AGCD01062320;GBDF01074903;XR_264176 MODEL 8968030 protein-coding B4galt7 beta-1,4-galactosyltransferase 7 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); galactosyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN glycosaminoglycan biosynthetic process (ortholog); negative regulation of fibroblast proliferation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955408 29837982 29847891 + 102005344 AGCD01008776;GBBH01142392;XM_013506598 XP_013362052 MODEL 8847499 pseudo LOC102018555 mesoderm induction early response protein 1-like NW_004955403 3675122 3683686 + 102018555 AGCD01001771 MODEL 8776301 pseudo LOC102009936 probable RNA-binding protein 46 pseudogene NW_004955414 12245219 12246350 - 102009936 AGCD01015095 MODEL 8788880 protein-coding Wnk4 WNK lysine deficient protein kinase 4 ENCODES a protein that exhibits chloride ion binding (ortholog); ion channel inhibitor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN aldosterone secretion (ortholog); calcium ion homeostasis (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955451 16593840 16606817 + 102028924 AGCD01043695;AGCD01043696;GBBH01026714;GBDF01163377;XM_013519256 XP_013374710 MODEL 8967496 ncrna LOC102012357 uncharacterized LOC102012357 NW_004955436 8984095 9017211 + 102012357 AGCD01033755;GBDF01158995;XR_261779;XR_261780 MODEL 10220341 protein-coding LOC106147408 vegetative cell wall protein gp1-like NW_004955555 2419604 2421477 + 106147408 AGCD01073152;AGCD01073153;GBCB01007212;XM_013508711 XP_013364165 MODEL 8884434 protein-coding Retn resistin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of feeding behavior (ortholog); positive regulation of progesterone secretion (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Albuminuria (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955563 1607814 1609273 - 102028141 AGCD01074153;GBDK01016678;XM_005413172 XP_005413229 MODEL 8720369 ncrna LOC102003284 uncharacterized LOC102003284 NW_004955438 10342037 10345901 + 102003284 AGCD01035203;GBDF01305498;XR_261924 MODEL 8952730 protein-coding Ccdc186 coiled-coil domain containing 186 INVOLVED IN glucose homeostasis (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); response to bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955431 19120937 19171332 - 102013530 AGCD01030441;AGCD01030442;AGCD01030443;GBDI01012386;XM_005387811;XM_005387812;XM_005387813;XM_013515849 XP_005387868;XP_005387869;XP_005387870;XP_013371303 MODEL 9026176 pseudo LOC102013888 protein AF1q-like NW_004955588 224254 224784 + 102013888 AGCD01076095 MODEL 8785742 protein-coding Brs3 bombesin receptor subtype 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN neuronal cell body (ortholog) NW_004955489 8627569 8631810 - 102013423 AGCD01060021;XM_005404590 XP_005404647 MODEL 8867425 protein-coding Apbb1 amyloid beta precursor protein binding family B member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN axon guidance (ortholog); DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955414 22121867 22137849 - 102020000 AGCD01015443;GBCQ01066769;GBDJ01011806;XM_013511828 XP_013367282 MODEL 9066826 protein-coding Sh3tc2 SH3 domain and tetratricopeptide repeats 2 INVOLVED IN myelination in peripheral nervous system (ortholog); peripheral nervous system myelin maintenance (ortholog); regulation of endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); brachydactyly (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog); recycling endosome (ortholog) NW_004955415 5286475 5354880 + 102030301 AGCD01015992;AGCD01015993;AGCD01015994;GBDF01192243;XM_005380627;XM_005380628;XM_005380629;XM_005380630;XM_005380631;XM_013512395;XM_013512396;XM_013512397;XR_001233271 XP_005380684;XP_005380685;XP_005380686;XP_005380687;XP_005380688;XP_013367849;XP_013367850;XP_013367851 MODEL 9010605 protein-coding Atp4a ATPase H+/K+ transporting subunit alpha ENCODES a protein that exhibits magnesium ion binding (ortholog); P-type potassium:proton transporter activity (ortholog); potassium ion binding (ortholog); INVOLVED IN pH reduction (ortholog); potassium ion transmembrane transport (ortholog); regulation of proton transport (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; esomeprazole pharmacokinetics pathway; ASSOCIATED WITH stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); potassium:proton exchanging ATPase complex (ortholog) NW_004955468 4778327 4844498 - 102023458 AGCD01051922;GBDF01080855;XM_013522382;XM_013522383 XP_013377836;XP_013377837 MODEL 8952435 protein-coding Dapk1 death associated protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to hydroperoxide (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); DAPK1-calmodulin complex (ortholog) NW_004955432 29925 254327 - 102021789 AGCD01030554;AGCD01030555;AGCD01030556;AGCD01030557;AGCD01030558;AGCD01030559;AGCD01030560;GBDJ01028198;XM_013516025;XM_013516026;XM_013516027 XP_013371479;XP_013371480;XP_013371481 MODEL 8836186 ncrna LOC102011114 uncharacterized LOC102011114 NW_004955416 28362023 28367569 + 102011114 AGCD01017627;GBCQ01114433;XR_001233378;XR_001233379;XR_260430;XR_260431;XR_260433 MODEL 9033490 protein-coding Impg2 interphotoreceptor matrix proteoglycan 2 ENCODES a protein that exhibits heparin binding (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); intracellular protein localization (ortholog); retina morphogenesis in camera-type eye (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN gel phase of interstitial matrix (ortholog); interphotoreceptor matrix (ortholog); signaling receptor complex (ortholog) NW_004955427 2825940 2919282 - 102027552 AGCD01026905;AGCD01026906;AGCD01026907;GBDI01097241;XM_013515197 XP_013370651 MODEL 9056964 ncrna LOC102007618 uncharacterized LOC102007618 NW_004955452 2440793 2444300 - 102007618 AGCD01043895;GBDK01010271;XR_262640 MODEL 8965483 protein-coding Pnkp polynucleotide kinase 3'-phosphatase ENCODES a protein that exhibits ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); polynucleotide 3'-phosphatase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via nonhomologous end joining (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Ataxia (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955559 1064924 1070120 + 102018779 AGCD01073627;AGCD01073628;GBCB01005335;GBCQ01040513;XM_013508947 XP_013364401 MODEL 8725157 protein-coding Cenpq centromere protein Q INVOLVED IN metaphase chromosome alignment (ortholog); positive regulation of protein localization to kinetochore (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN inner kinetochore (ortholog); nucleoplasm (ortholog) NW_004955410 33463041 33480573 - 102003524 AGCD01011371;GBDJ01369703;XM_005377535 XP_005377592 MODEL 8829884 protein-coding Esrp2 epithelial splicing regulatory protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); cleft lip (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8426453 8433902 + 102012434 AGCD01058383;GBCQ01177080;XM_005403591 XP_005403648 MODEL 8996883 protein-coding Cabs1 calcium binding protein, spermatid associated 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Anaphylaxis (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); mitochondrial inner membrane (ortholog) NW_004955447 2581173 2582481 - 102026487 AGCD01040548;GBDF01007154;XM_013518486 XP_013373940 MODEL 39131655 rrna 5S_rRNA 5S ribosomal RNA 8777558 protein-coding Akap14 A-kinase anchoring protein 14 ENCODES a protein that exhibits protein kinase A binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); sperm fibrous sheath (ortholog) NW_004955534 120603 137227 - 102006952 AGCD01070439;AGCD01070440;GBDF01249690;XM_005410427;XM_013507698 XP_005410484;XP_013363152 MODEL 8956595 protein-coding Chad chondroadherin INVOLVED IN bone development (ortholog); cartilage condensation (ortholog); negative regulation of bone trabecula formation (ortholog) NW_004955451 11285822 11289644 + 102013038 AGCD01043345;GBBH01207076;XM_005394170 XP_005394227 MODEL 8815120 ncrna LOC102014277 uncharacterized LOC102014277 NW_004955433 14106863 14109014 - 102014277 AGCD01031706;GBDF01146409;XR_261591 MODEL 8739427 protein-coding Arhgap5 Rho GTPase activating protein 5 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN mammary gland development (ortholog); positive regulation of cell migration (ortholog); positive regulation of mesenchymal cell proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Mammary Neoplasms (ortholog); lung metastasis (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955409 28627176 28682302 - 102009356 AGCD01010237;AGCD01010238;AGCD01010239;AGCD01010240;GBCC01000954;GBCQ01122523;XM_005376949 XP_005377006 MODEL 9012098 protein-coding Adnp activity dependent neuroprotector homeobox ENCODES a protein that exhibits beta-catenin binding (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cGMP metabolic process (ortholog); estrous cycle (ortholog); ASSOCIATED WITH Abdominal Obesity (ortholog); allergic disease (ortholog); allergic rhinitis (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); extracellular region (ortholog) NW_004955445 7498223 7530828 + 102022978 AGCD01039543;GBBH01187236;GBCE01134997;XM_005392308 XP_005392365 MODEL 9003117 protein-coding Runx1t1 RUNX1 partner transcriptional co-repressor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 8580355 8714267 - 102016265 AGCD01018029;AGCD01018030;AGCD01018031;AGCD01018032;GBCB01020155;XM_005381778 XP_005381835 MODEL 8912328 protein-coding Slc4a8 solute carrier family 4 member 8 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride transmembrane transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN basolateral protein secretion (ortholog); bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); asymmetric synapse (ortholog); axon terminus (ortholog) NW_004955547 1896597 1975285 + 102025945 AGCD01072250;AGCD01072251;GBDF01263263;XM_005415404 XP_005415461 MODEL 8761316 protein-coding LOC102009160 putative olfactory receptor 2W6 NW_004955465 13945042 13945998 - 102009160 AGCD01050638;XM_005399018 XP_005399075 MODEL 8712256 protein-coding LOC102022609 putative MAGE domain-containing protein MAGEA13P NW_004955489 6761364 6855797 - 102022609 AGCD01059965;AGCD01059966;AGCD01059967;GBDF01303343;XM_013504466;XM_013504467 XP_013359920;XP_013359921 MODEL 8966488 ncrna LOC102007245 uncharacterized LOC102007245 NW_004955495 6585034 6603591 - 102007245 AGCD01062085;GBDF01168574;XR_001231373;XR_264166 MODEL 9032833 ncrna LOC102004338 uncharacterized LOC102004338 NW_004955569 1198723 1215199 - 102004338 AGCD01074644;GBDF01080568;XR_001232427;XR_265045 MODEL 8873055 protein-coding Abhd17c abhydrolase domain containing 17C, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of protein localization to microtubule (ortholog); positive regulation of protein localization to endosome (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density membrane (ortholog) NW_004955416 11495651 11543276 + 102020244 AGCD01017188;AGCD01017189;GBBH01143645;XM_005381433 XP_005381490 MODEL 8881211 protein-coding Apbb1ip amyloid beta precursor protein binding family B member 1 interacting protein INVOLVED IN positive regulation of cell adhesion (ortholog); T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) NW_004955429 2874783 2973321 - 102009407 AGCD01028444;AGCD01028445;AGCD01028446;GBCE01163226;GBDI01006228;XM_013515446 XP_013370900 MODEL 9004477 protein-coding Actmap actin maturation protease ENCODES a protein that exhibits cysteine-type aminopeptidase activity (ortholog); initiator methionyl aminopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955578 590202 596846 + 102006966 AGCD01075489;GBDI01000116;XM_005414025;XR_001232466;XR_265085;XR_265086 XP_005414082 MODEL 8774005 protein-coding Flvcr1 FLVCR choline and heme transporter 1 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); heme B transmembrane transporter activity (ortholog); INVOLVED IN blood vessel development (ortholog); choline transport (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asphyxiating thoracic dystrophy (ortholog); asthma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955406 4673797 4702858 - 102013798 AGCD01005699;AGCD01005700;AGCD01005701;GBCE01057352;GBDI01219305;XM_013520040;XM_013520050 XP_013375494;XP_013375504 MODEL 8969762 protein-coding Clvs1 clavesin 1 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN lysosome organization (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endosome (ortholog); trans-Golgi network (ortholog) NW_004955444 17319905 17515397 - 102027582 AGCD01039213;AGCD01039214;AGCD01039215;AGCD01039216;GBDJ01218136;XM_005392175 XP_005392232 MODEL 9060584 trna trnW(tca) tRNA-Trp MT 4942 5010 + 15822204 9042449 protein-coding LOC102011137 olfactory receptor 4D11-like NW_004955511 4022531 4023466 + 102011137 AGCD01066488;XM_013506353 XP_013361807 MODEL 9002280 protein-coding LOC102008394 arachidonate 12-lipoxygenase, 12S-type NW_004955467 9919322 9931806 - 102008394 AGCD01051535;AGCD01051536;GBBH01140041;XM_005399578 XP_005399635 MODEL 10257704 ncrna LOC106147409 uncharacterized LOC106147409 NW_004955555 2434079 2440302 - 106147409 AGCD01073153;AGCD01073154;XR_001232304 MODEL 39134000 misc_rna 7SK 7SK RNA 8939295 pseudo LOC102003287 60S ribosomal protein L23a pseudogene NW_004955442 14142494 14143509 + 102003287 AGCD01037802 MODEL 8763667 protein-coding Sp6 Sp6 transcription factor INVOLVED IN epithelial to mesenchymal transition (ortholog); odontogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1K (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 13264537 13270104 + 102013239 AGCD01043463;AGCD01043464;GBDF01261731;XM_005394262 XP_005394319 MODEL 9041102 protein-coding Ccdc187 coiled-coil domain containing 187 NW_004955513 4393583 4433285 + 102014158 AGCD01066927;GBBH01061817;XM_013506618;XM_013506619;XM_013506620;XM_013506621;XM_013506622;XM_013506623;XM_013506624;XM_013506625;XM_013506626;XM_013506627;XM_013506628;XM_013506629;XM_013506630;XM_013506631;XM_013506632;XM_013506633;XM_013506634;XM_013506635;XM_013506636;XM_013506637 XP_013362072;XP_013362073;XP_013362074;XP_013362075;XP_013362076;XP_013362077;XP_013362078;XP_013362079;XP_013362080;XP_013362081;XP_013362082;XP_013362083;XP_013362084;XP_013362085;XP_013362086;XP_013362087;XP_013362088;XP_013362089;XP_013362090;XP_013362091 MODEL 9029942 ncrna LOC102012781 uncharacterized LOC102012781 NW_004955506 899099 904521 - 102012781 AGCD01065240;GBCE01032246;XR_264316 MODEL 9043490 protein-coding Brsk1 BR serine/threonine kinase 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); magnesium ion binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN associative learning (ortholog); axonogenesis (ortholog); centrosome duplication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cholinergic synapse (ortholog); cytoplasm (ortholog) NW_004955567 924728 943092 - 102027122 AGCD01074446;AGCD01074447;GBCE01016557;GBDJ01062535;XM_013509249 XP_013364703 MODEL 8773901 protein-coding LOC102008793 collagen alpha-2(I) chain NW_004955580 161170 172197 - 102008793 AGCD01075587;AGCD01075588;AGCD01075589;GBDF01080395;XM_005414114 XP_005414171 MODEL 8856664 protein-coding Sh3yl1 SH3 and SYLF domain containing 1 ENCODES a protein that exhibits phosphatase binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN phosphatidylinositol biosynthetic process (ortholog); regulation of ruffle assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN ruffle membrane (ortholog) NW_004955487 258116 290377 - 102005047 AGCD01059215;AGCD01059216;GBCQ01039979;XM_005404334;XM_005404336;XM_013504378 XP_005404391;XP_005404393;XP_013359832 MODEL 8938013 protein-coding Atp4b ATPase H+/K+ transporting subunit beta ENCODES a protein that exhibits heterocyclic compound binding (ortholog); INVOLVED IN pH reduction (ortholog); potassium ion transmembrane transport (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; esomeprazole pharmacokinetics pathway; ASSOCIATED WITH atrophic gastritis (ortholog); autoimmune gastritis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN plasma membrane (ortholog); potassium:proton exchanging ATPase complex (ortholog) NW_004955404 362410 372077 + 102030030 AGCD01003199;GBDK01001430;XM_005373937 XP_005373994 MODEL 8865628 protein-coding LOC102011120 filamin-interacting protein FAM101A ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN actin filament bundle organization (ortholog); negative regulation of bone mineralization involved in bone maturation (ortholog); negative regulation of chondrocyte development (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN actin filament bundle (ortholog) NW_004955482 5034075 5044162 - 102011120 AGCD01057318;GBCE01016386;XM_005403010;XM_005403011;XM_013503639 XP_005403067;XP_005403068;XP_013359093 MODEL 8885898 protein-coding Dapk2 death associated protein kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN anoikis (ortholog); intracellular signal transduction (ortholog); neutrophil migration (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955450 11348566 11443908 + 102021824 AGCD01042659;AGCD01042660;AGCD01042661;GBCE01115793;XM_013519004 XP_013374458 MODEL 8909007 protein-coding B4gat1 beta-1,4-glucuronyltransferase 1 ENCODES a protein that exhibits glucuronosyltransferase activity (ortholog); N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN axon guidance (ortholog); glycoprotein biosynthetic process (ortholog); poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); congenital muscular dystrophy-dystroglycanopathy type A13 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955422 18979545 18981889 + 102012768 AGCD01022970;GBBH01026998;XM_005384408 XP_005384465 MODEL 8987121 ncrna LOC102018557 uncharacterized LOC102018557 NW_004955405 28168327 28173766 - 102018557 AGCD01005232;GBDF01303388;XR_259405 MODEL 9043169 protein-coding Col6a1 collagen type VI alpha 1 chain ENCODES a protein that exhibits collagen binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); adipose tissue development (ortholog); apoptotic nuclear changes (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Bethlem myopathy (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955407 42461837 42479048 + 102015480 AGCD01007892;GBDJ01018240;XM_005375923 XP_005375980 MODEL 8808218 protein-coding Pnldc1 PARN like ribonuclease domain containing exonuclease 1 ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN blastocyst formation (ortholog); nuclear-transcribed mRNA poly(A) tail shortening (ortholog); piRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955439 21039638 21058558 - 102014496 AGCD01036135;GBDF01220476;XM_005390708;XM_005390709;XM_013517325;XM_013517326 XP_005390765;XP_005390766;XP_013372779;XP_013372780 MODEL 8957237 protein-coding Cdcp1 CUB domain containing protein 1 INVOLVED IN cell population proliferation (ortholog); establishment of protein localization (ortholog); hepatocyte growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955420 26596932 26636207 + 102009846 AGCD01021418;AGCD01021419;AGCD01021420;GBBH01206955;XM_013513348 XP_013368802 MODEL 8944585 protein-coding Retreg1 reticulophagy regulator 1 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN autophagy (ortholog); collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Charcot-Marie-Tooth disease (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955426 5574207 5688236 - 102012106 AGCD01026130;AGCD01026131;AGCD01026132;AGCD01026133;AGCD01026134;AGCD01026135;AGCD01026136;AGCD01026137;AGCD01026138;GBCB01023016;XM_005386135;XM_005386136 XP_005386192;XP_005386193 MODEL 8781205 ncrna LOC102006132 uncharacterized LOC102006132 NW_004955419 22988158 23031113 - 102006132 AGCD01020311;GBDF01280732;XR_260655 MODEL 9063855 protein-coding Angptl4 angiopoietin like 4 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); PARTICIPATES IN lipid metabolic pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955563 1024163 1030816 - 102013662 AGCD01074105;AGCD01074106;AGCD01074107;GBBH01155465;GBDI01168623;XM_013509151 XP_013364605 MODEL 8814453 ncrna LOC102013892 uncharacterized LOC102013892 NW_004955592 626798 629024 - 102013892 AGCD01076320;GBCC01000850;XR_265141 MODEL 8870444 protein-coding LOC102014278 smad nuclear-interacting protein 1-like NW_004955433 17532271 17555122 - 102014278 AGCD01031821;AGCD01031822;XM_013516108 XP_013371562 MODEL 8946980 ncrna LOC102011963 uncharacterized LOC102011963 NW_004955410 30060160 30071952 - 102011963 AGCD01011301;GBDF01192837;XR_259886 MODEL 39132515 rrna 5S_rRNA 5S ribosomal RNA 8781372 protein-coding Chadl chondroadherin like ENCODES a protein that exhibits collagen binding (ortholog); collagen fibril binding (ortholog); INVOLVED IN negative regulation of chondrocyte differentiation (ortholog); negative regulation of collagen fibril organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); gel phase of interstitial matrix (ortholog) NW_004955413 26846714 26862082 - 102012085 AGCD01014482;AGCD01014483;AGCD01014484;GBBH01207075;XM_013511352 XP_013366806 MODEL 8755376 protein-coding LOC102003292 E3 ubiquitin-protein ligase RNF114 NW_004955445 8256029 8268349 - 102003292 AGCD01039569;AGCD01039570;GBBH01035032;GBCB01026100;XM_005392324 XP_005392381 MODEL 8812564 protein-coding Arhgap6 Rho GTPase activating protein 6 ENCODES a protein that exhibits GTPase activator activity (ortholog); phospholipase activator activity (ortholog); phospholipase binding (ortholog); INVOLVED IN actin filament organization (ortholog); focal adhesion assembly (ortholog); negative regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Prostate Cancer (ortholog); microphthalmia (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955544 1619742 2095314 + 102004975 AGCD01071728;AGCD01071729;AGCD01071730;AGCD01071731;AGCD01071732;GBCB01111614;XM_005411385;XM_005411386;XM_005411387;XM_005411388 XP_005411442;XP_005411443;XP_005411444;XP_005411445 MODEL 8841654 protein-coding LOC102022610 olfactory receptor 10AC1-like NW_004955491 70906 72516 - 102022610 AGCD01060319;GBDF01160348;XM_005404876 XP_005404933 MODEL 8993979 protein-coding LOC102007626 keratin-associated protein 20-1-like NW_004955407 30169411 30169593 + 102007626 AGCD01007628;XM_005375642 XP_005375699 MODEL 9009924 protein-coding Lrrc10b leucine rich repeat containing 10B NW_004955511 6096626 6098344 - 102021157 AGCD01066596;GBBH01032881;XM_013506504 XP_013361958 MODEL 8814304 ncrna LOC102009937 uncharacterized LOC102009937 NW_004955415 6291304 6307243 - 102009937 AGCD01016013;AGCD01016014;GBBH01127465;XR_001233263 MODEL 8745432 protein-coding Slc4a9 solute carrier family 4 member 9 ENCODES a protein that exhibits chloride:bicarbonate antiporter activity (ortholog); sodium,bicarbonate:chloride antiporter activity (ortholog); sodium:bicarbonate symporter activity (ortholog); INVOLVED IN monoatomic anion transport (ortholog); saliva secretion (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) NW_004955418 273383 288675 - 102005141 AGCD01018671;GBBH01001332;XM_013512899;XM_013512900;XM_013512901;XM_013512902;XM_013512903;XR_001233497 XP_013368353;XP_013368354;XP_013368355;XP_013368356;XP_013368357 MODEL 8751758 pseudo LOC102012361 iron-sulfur cluster assembly 1 homolog, mitochondrial pseudogene NW_004955437 12049308 12050497 - 102012361 AGCD01034594 MODEL 8731730 protein-coding Flvcr2 FLVCR choline and putative heme transporter 2 ENCODES a protein that exhibits choline binding (ortholog); choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); choline transport (ortholog); endothelial tip cell fate specification (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog); plasma membrane (ortholog) NW_004955612 46723 99012 + 102023420 AGCD01077180;GBDK01076389;XM_005414963;XM_005414964;XM_013510128;XM_013510129 XP_005415020;XP_005415021;XP_013365582;XP_013365583 MODEL 9003015 protein-coding Apbb2 amyloid beta precursor protein binding family B member 2 INVOLVED IN axon guidance (ortholog); extracellular matrix organization (ortholog); maintenance of lens transparency (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955443 6513762 6786247 + 102013223 AGCD01038261;AGCD01038262;AGCD01038263;GBCQ01034557;XM_005391938;XM_005391948;XM_013518039;XM_013518040;XM_013518041;XM_013518042;XM_013518043;XM_013518044;XM_013518045;XM_013518046;XM_013518047;XM_013518048;XM_013518049;XM_013518050 XP_005391995;XP_005392005;XP_013373493;XP_013373494;XP_013373495;XP_013373496;XP_013373497;XP_013373498;XP_013373499;XP_013373500;XP_013373501;XP_013373502;XP_013373503;XP_013373504 MODEL 9041720 protein-coding Esrra estrogen related receptor alpha ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955422 20768450 20775205 - 102011328 AGCD01023086;GBCB01005642;GBDF01188656;XM_005384600 XP_005384657 MODEL 39131656 rrna 5S_rRNA 5S ribosomal RNA 8874092 protein-coding Clvs2 clavesin 2 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN lysosome organization (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endosome (ortholog); trans-Golgi network (ortholog) NW_004955436 4758749 4823383 + 102026669 AGCD01033673;AGCD01033674;GBCE01019750;XM_005389152 XP_005389209 MODEL 8805688 protein-coding Cabyr calcium binding tyrosine phosphorylation regulated ENCODES a protein that exhibits calcium ion binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colorectal Neoplasms (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); motile cilium (ortholog) NW_004955402 12508524 12529230 + 102008364 AGCD01000391;GBDF01002956;XM_005372711;XM_005372713;XM_005372714;XM_013504625;XM_013504661 XP_005372768;XP_005372770;XP_005372771;XP_013360079;XP_013360115 MODEL 39131785 rrna 5S_rRNA 5S ribosomal RNA 9001158 protein-coding Akap17a A-kinase anchoring protein 17A ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955499 1119658 1130250 + 102025028 AGCD01063321;AGCD01063322;AGCD01063323;GBCB01043489;GBCB01043491;XM_013505618 XP_013361072 MODEL 8965912 protein-coding LOC102008396 apolipoprotein L6-like NW_004955413 21987513 22022979 + 102008396 AGCD01014278;AGCD01014279;GBDF01146804;XM_013511275 XP_013366729 MODEL 39133873 misc_rna 7SK 7SK RNA 8746407 protein-coding Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of cell growth (ortholog); negative regulation of DNA biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955410 8317640 8338407 - 102015933 AGCD01010744;GBDF01089388;XM_005377226 XP_005377283 MODEL 8901502 protein-coding Ina internexin neuronal intermediate filament protein alpha ENCODES a protein that exhibits protein-containing complex binding (ortholog); structural constituent of postsynaptic intermediate filament cytoskeleton (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); intermediate filament cytoskeleton organization (ortholog); neurofilament cytoskeleton organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); High Myopia (ortholog); Lupus Vasculitis, Central Nervous System (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); glutamatergic synapse (ortholog); neurofilament (ortholog) NW_004955485 7238723 7266995 - 102014787 AGCD01058648;AGCD01058649;GBDF01213804;XM_005403924 XP_005403981 MODEL 8866998 pseudo LOC102005051 nucleosome assembly protein 1-like 1 pseudogene NW_004955491 8228056 8233055 + 102005051 AGCD01060610 MODEL 8835268 protein-coding LOC102009161 lupus La protein-like NW_004955412 27605630 27607235 - 102009161 AGCD01013242;GBBH01116715;GBCC01021705;XM_005378521 XP_005378578 MODEL 8782217 protein-coding Prph peripherin ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN terminal bouton; axon (ortholog); C-fiber (ortholog) NW_004955500 8106371 8117221 + 102016172 AGCD01063978;AGCD01063979;AGCD01063980;GBCE01007281;XM_005406695 XP_005406752 MODEL 9062546 protein-coding Ccdc188 coiled-coil domain containing 188 INVOLVED IN single fertilization (ortholog); sperm mitochondrial sheath assembly (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); male infertility due to acephalic spermatozoa (ortholog) NW_004955442 17962249 17965261 + 102022129 AGCD01037990;GBDF01044084;XM_005391726;XM_005391727;XM_005391728;XM_005391729;XM_005391730;XM_013517767;XM_013517768 XP_005391783;XP_005391784;XP_005391785;XP_005391786;XP_005391787;XP_013373221;XP_013373222 MODEL 8932382 ncrna LOC102012784 uncharacterized LOC102012784 NW_004955428 17863566 17878885 + 102012784 AGCD01028052;GBCQ01167239;XR_261304 MODEL 9038218 protein-coding Wnt1 Wnt family member 1 ENCODES a protein that exhibits cytokine activity (ortholog); protein domain specific binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte-dopaminergic neuron signaling (ortholog); bone development (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atherosclerosis (ortholog); Bradycardia (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955500 7797063 7811142 + 102010502 AGCD01063947;AGCD01063948;AGCD01063949;GBDF01147903;XM_005406674 XP_005406731 MODEL 9031747 protein-coding Chaf1a chromatin assembly factor 1 subunit A ENCODES a protein that exhibits chromo shadow domain binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colon cancer (ortholog); FOUND IN CAF-1 complex (ortholog); chromatin (ortholog); nucleoplasm (ortholog) NW_004955495 4467317 4499419 - 102008121 AGCD01061924;AGCD01061925;AGCD01061926;GBDI01384930;XM_005405794;XM_013505362;XM_013505363;XM_013505364 XP_005405851;XP_013360816;XP_013360817;XP_013360818 MODEL 9049082 ncrna LOC102008798 uncharacterized LOC102008798 NW_004955592 168536 235179 + 102008798 AGCD01076300;AGCD01076301;GBDF01077466;XR_001232541;XR_001232542;XR_265134;XR_265135;XR_265136 MODEL 9058261 protein-coding Atp5f1a ATP synthase F1 subunit alpha ENCODES a protein that exhibits ADP binding (ortholog); angiostatin binding (ortholog); ATP binding (ortholog); INVOLVED IN ATP biosynthetic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to nitric oxide (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) NW_004955402 31652226 31662114 - 102027364 AGCD01000801;GBDK01016982;XM_005372864 XP_005372921 MODEL 8716170 pseudo LOC102011138 mitochondrial calcium uniporter regulator 1 pseudogene NW_004955430 1898687 1900786 - 102011138 AGCD01029142 MODEL 10341827 protein-coding LOC106147411 atherin-like NW_004955408 9908864 9989195 + 106147411 AGCD01008259;AGCD01008260;GBCE01162942;GBDF01228059;XM_013508750 XP_013364204 MODEL 8866559 protein-coding Col6a2 collagen type VI alpha 2 chain ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN neuron apoptotic process (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to glucose (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Bethlem myopathy (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955407 42575677 42600967 + 102016562 AGCD01007894;GBDI01001309;XM_005375925;XM_005375927 XP_005375982;XP_005375984 MODEL 8982854 protein-coding Cdcp2 CUB domain containing protein 2 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955464 5098102 5115555 + 102004792 AGCD01049999;GBDK01218834;XM_005398534 XP_005398591 MODEL 9002638 protein-coding Pnliprp1 pancreatic lipase related protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); lipase activity (ortholog); INVOLVED IN pancreas development (ortholog); response to glucocorticoid (ortholog); response to peptide hormone (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); prostate cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955431 21391166 21406617 + 102023510 AGCD01030496;XM_005387852 XP_005387909 MODEL 8979723 ncrna LOC102006138 uncharacterized LOC102006138 NW_004955420 26173887 26191360 - 102006138 AGCD01021392;GBDF01207381;XR_001233810;XR_260757 MODEL 8792571 protein-coding Sp7 Sp7 transcription factor ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to parathyroid hormone stimulus (ortholog); cellular response to zinc ion starvation (ortholog); cementum mineralization (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); osteogenesis imperfecta (ortholog); osteogenesis imperfecta type 12 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 583981 602856 - 102019671 AGCD01047137;AGCD01047138;AGCD01047139;AGCD01047140;GBBH01190592;XM_005397173;XM_005397174;XM_005397175;XM_013520954 XP_005397230;XP_005397231;XP_005397232;XP_013376408 MODEL 9058673 protein-coding Cenps centromere protein S ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); interstrand cross-link repair (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955486 3157535 3167424 - 102015527 AGCD01059018;GBBH01188068;XM_005404017;XM_013504292 XP_005404074;XP_013359746 MODEL 39133874 misc_rna 7SK 7SK RNA 8917975 protein-coding Abhd18 abhydrolase domain containing 18 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955428 13461446 13519184 - 102004188 AGCD01027953;AGCD01027954;AGCD01027955;AGCD01027956;GBDF01303927;XM_005386733;XM_005386734;XM_013515329;XM_013515330;XM_013515331 XP_005386790;XP_005386791;XP_013370783;XP_013370784;XP_013370785 MODEL 8797847 protein-coding Inafm2 InaF motif containing 2 NW_004955416 7251468 7253776 + 102018596 AGCD01016971;GBBH01076529;GBDI01296119;XM_013512601 XP_013368055 MODEL 8715938 pseudo LOC102003293 exportin-6 pseudogene NW_004955445 11816035 11825133 + 102003293 AGCD01039717 MODEL 8924825 trna trnY(gta) tRNA-Tyr MT 5259 5325 - 15822224 8947551 protein-coding Dapk3 death associated protein kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin filament (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) NW_004955495 4809475 4822210 + 102015644 AGCD01061951;AGCD01061952;GBDF01046832;XM_005405820;XM_005405821;XM_005405822 XP_005405877;XP_005405878;XP_005405879 MODEL 8736728 protein-coding LOC102009952 uncharacterized LOC102009952 NW_004955420 29396157 29403592 - 102009952 AGCD01021499;AGCD01021500;GBCE01185548;XM_013513408;XR_001233705;XR_001233706;XR_001233707;XR_260774;XR_260775 XP_013368862 MODEL 39131657 rrna 5S_rRNA 5S ribosomal RNA 9042078 protein-coding Retreg2 reticulophagy regulator family member 2 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); reticulophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955453 14258523 14263573 - 102021839 AGCD01044860;GBCQ01006315;XM_005395587 XP_005395644 MODEL 8878534 ncrna LOC102007252 uncharacterized LOC102007252 NW_004955427 4321562 4338950 + 102007252 AGCD01026962;GBDF01219849;XR_001234341;XR_001234342;XR_261230 MODEL 8751440 protein-coding Runx2 RUNX family transcription factor 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone regeneration (ortholog); cell maturation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Aortic Calcification (ortholog); Bone Fractures (ortholog); FOUND IN chromatin (ortholog); core-binding factor complex (ortholog); cytoplasm (ortholog) NW_004955437 10598145 10885858 + 102025170 AGCD01034563;AGCD01034564;AGCD01034565;AGCD01034566;AGCD01034567;AGCD01034568;GBCE01001577;XM_005389822;XM_005389823;XM_005389831;XM_013516854;XM_013516855;XM_013516856;XM_013516857 XP_005389879;XP_005389880;XP_005389888;XP_013372308;XP_013372309;XP_013372310;XP_013372311 MODEL 39131786 rrna 5S_rRNA 5S ribosomal RNA 8782045 protein-coding Dapl1 death associated protein like 1 INVOLVED IN cell population proliferation (ortholog); gene expression (ortholog); negative regulation of CD8-positive, alpha-beta T cell activation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955449 14696413 14716520 - 102008480 AGCD01042172;GBDI01295898;XM_005393382 XP_005393439 MODEL 8949322 protein-coding Angptl5 angiopoietin like 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955412 5236268 5254866 - 102008831 AGCD01012621;AGCD01012622;GBDK01366137;XM_005377966 XP_005378023 MODEL 8939296 protein-coding Actn1 actinin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal regulatory protein binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); actin filament organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH blood coagulation disease (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN actin filament (ortholog); anchoring junction (ortholog); brush border (ortholog) NW_004955466 1388507 1480990 + 102003424 AGCD01050705;AGCD01050706;AGCD01050707;AGCD01050708;GBDJ01024886;XM_005399045;XM_005399046;XM_005399047;XM_005399048 XP_005399102;XP_005399103;XP_005399104;XP_005399105 MODEL 8726374 protein-coding LOC102022613 uncharacterized LOC102022613 NW_004955494 2980579 2986183 - 102022613 AGCD01061458;GBDF01238692;XM_005405425 XP_005405482 MODEL 8912503 pseudo LOC102005056 cullin-4B pseudogene NW_004955422 28787889 28796918 + 102005056 AGCD01023368;AGCD01023369;AGCD01023370 MODEL 8706521 protein-coding Lrrc14 leucine rich repeat containing 14 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN negative regulation of toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955454 3142621 3146470 + 102010226 AGCD01045057;GBDI01115994;XM_005395903;XM_005395907;XM_013520075;XM_013520076;XM_013520077;XM_013520078;XM_013520079;XM_013520080;XM_013520081;XM_013520082;XM_013520083 XP_005395960;XP_005395964;XP_013375529;XP_013375530;XP_013375531;XP_013375532;XP_013375533;XP_013375534;XP_013375535;XP_013375536;XP_013375537 MODEL 8818666 pseudo LOC102012364 protein angel homolog 2-like NW_004955439 11699313 11700945 - 102012364 AGCD01035919 MODEL 8927793 protein-coding Slc50a1 solute carrier family 50 member 1 ENCODES a protein that exhibits glucoside transmembrane transporter activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endomembrane system (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955545 1617725 1620804 + 102026355 AGCD01071863;GBCQ01141801;XM_005411573;XM_005411574;XM_005411575;XM_013508366;XM_013508367 XP_005411630;XP_005411631;XP_005411632;XP_013363820;XP_013363821 MODEL 8924806 protein-coding Adnp2 ADNP homeobox 2 INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955402 63312588 63346307 + 102029344 AGCD01001669;AGCD01001670;GBDF01156162;XM_005373126;XM_005373127 XP_005373183;XP_005373184 MODEL 8800582 protein-coding Chaf1b chromatin assembly factor 1 subunit B INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN CAF-1 complex (ortholog); chromatin (ortholog); nucleoplasm (ortholog) NW_004955407 35601992 35618287 + 102011083 AGCD01007749;GBCB01094059;XM_005375738;XM_005375739 XP_005375795;XP_005375796 MODEL 9017189 protein-coding Flywch1 FLYWCH-type zinc finger 1 ENCODES a protein that exhibits transcription coactivator binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 14392901 14419178 - 102012692 AGCD01037815;AGCD01037816;GBDJ01238933;XM_005391393;XM_005391394;XM_013517968;XM_013517969;XM_013517970;XM_013517971;XM_013517972;XM_013517973;XM_013517974;XM_013517975;XM_013517976 XP_005391450;XP_005391451;XP_013373422;XP_013373423;XP_013373424;XP_013373425;XP_013373426;XP_013373427;XP_013373428;XP_013373429;XP_013373430 MODEL 8886137 protein-coding Apbb3 amyloid beta precursor protein binding family B member 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN negative regulation of cell cycle phase transition (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of protein secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nuclear body (ortholog) NW_004955418 118577 126021 + 102030632 AGCD01018668;GBDJ01340796;XM_005382021;XM_005382024;XM_013512904;XM_013512905 XP_005382078;XP_005382081;XP_013368358;XP_013368359 MODEL 9063230 protein-coding Cacfd1 calcium channel flower domain containing 1 INVOLVED IN endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955513 2787098 2796132 + 102018630 AGCD01066890;GBBH01214050;XM_005408450;XM_005408451 XP_005408507;XP_005408508 MODEL 8860854 protein-coding LOC102013897 type 2 lactosamine alpha-2,3-sialyltransferase NW_004956238 417 2786 + 102013897 AGCD01079299;GBCE01084662;GBDI01291305;XM_005415184 XP_005415241 MODEL 8768475 protein-coding LOC102014286 cancer/testis antigen 47A-like NW_004955534 877150 879824 - 102014286 AGCD01070476;GBDF01016690;XM_005410452 XP_005410509 MODEL 9023900 protein-coding Atp5f1b ATP synthase F1 subunit beta ENCODES a protein that exhibits ADP binding (ortholog); angiostatin binding (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); ATP biosynthetic process (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH acute kidney failure (ortholog); Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) NW_004955458 4188167 4195575 - 102028384 AGCD01047381;AGCD01047382;AGCD01047383;GBCQ01010805;XM_013520804 XP_013376258 MODEL 8724761 pseudo LOC102011964 40S ribosomal protein S3a pseudogene NW_004955410 19855730 19856950 - 102011964 AGCD01011031 MODEL 39132519 rrna 5S_rRNA 5S ribosomal RNA 8878660 protein-coding Col6a3 collagen type VI alpha 3 chain INVOLVED IN neuron apoptotic process (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to glucose (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute promyelocytic leukemia (ortholog); asthma (ortholog); FOUND IN collagen trimer (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955542 2869183 2950569 + 102009762 AGCD01071541;GBCE01033024;XM_005411233;XM_005411235;XM_005411236;XM_005411237;XM_013508116 XP_005411290;XP_005411292;XP_005411293;XP_005411294;XP_013363570 MODEL 8978338 protein-coding Bach2 BACH transcriptional regulator 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); primary adaptive immune response involving T cells and B cells (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); celiac disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955411 16607546 16947359 - 102009920 AGCD01011978;AGCD01011979;AGCD01011980;AGCD01011981;AGCD01011982;AGCD01011983;GBDJ01370411;XM_005377762;XM_005377763;XM_005377764;XM_013510775;XM_013510776;XM_013510777 XP_005377819;XP_005377820;XP_005377821;XP_013366229;XP_013366230;XP_013366231 MODEL 8953506 protein-coding LOC102007627 ral guanine nucleotide dissociation stimulator-like NW_004955407 35377264 35380004 - 102007627 AGCD01007740;GBDF01084243;XM_005375725;XM_013504566 XP_005375782;XP_013360020 MODEL 9050409 protein-coding Dnajc21 DnaJ heat shock protein family (Hsp40) member C21 ASSOCIATED WITH acute myeloid leukemia (ortholog); Bone Marrow Failure Syndrome 3 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955426 20060734 20076549 + 102009300 AGCD01026562;GBDF01046748;GBDF01046750;XM_013515016 XP_013370470 MODEL 8880268 protein-coding Brsk2 BR serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); ATPase binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axonogenesis (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); distal axon (ortholog) NW_004955476 10911515 10951544 - 102003123 AGCD01055431;GBDF01194489;XM_013502987;XM_013502988;XM_013502989;XM_013502990;XM_013502991;XM_013502992;XM_013502993;XM_013502994;XR_001230801 XP_013358441;XP_013358442;XP_013358443;XP_013358444;XP_013358445;XP_013358446;XP_013358447;XP_013358448 MODEL 8818807 ncrna LOC102018561 uncharacterized LOC102018561 NW_004955406 37905165 37930172 - 102018561 AGCD01006580;GBDF01063968;XR_001236867 MODEL 8811601 protein-coding Dapp1 dual adaptor of phosphotyrosine and 3-phosphoinositides 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955496 7813540 7855754 - 102022941 AGCD01062385;GBDJ01094345;XM_005406268;XM_013505383 XP_005406325;XP_013360837 MODEL 8723885 protein-coding B9d1 B9 domain containing 1 ENCODES a protein that exhibits hedgehog receptor activity (ortholog); INVOLVED IN camera-type eye development (ortholog); cilium assembly (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); ciliopathy (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955467 405487 415887 + 102003222 AGCD01051219;GBDF01002264;XM_005399272;XM_005399273;XM_013522256 XP_005399329;XP_005399330;XP_013377710 MODEL 8891788 protein-coding Prph2 peripherin 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); photoreceptor cell outer segment organization (ortholog); protein heterooligomerization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH anxiety disorder (ortholog); bestrophinopathy (ortholog); bipolar disorder (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) NW_004955437 8784211 8794789 - 102023632 AGCD01034497;AGCD01034498;GBBH01103789;XM_005389723 XP_005389780 MODEL 8838790 protein-coding Ccdc190 coiled-coil domain containing 190 ASSOCIATED WITH esophageal cancer (ortholog) NW_004955462 13524706 13532251 + 102010040 AGCD01049427;GBDF01251289;XM_005398262;XM_005398263;XM_005398264;XM_005398265;XM_005398266;XM_005398267 XP_005398319;XP_005398320;XP_005398321;XP_005398322;XP_005398323;XP_005398324 MODEL 8891744 protein-coding Cenpt centromere protein T INVOLVED IN chromosome organization (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) NW_004955484 8862221 8867881 + 102022500 AGCD01058398;GBDF01240506;XM_005403622 XP_005403679 MODEL 8863296 protein-coding LOC102012785 histone H1x ENCODES a protein that exhibits structural constituent of chromatin (ortholog); INVOLVED IN chromosome condensation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955429 13671907 13673689 - 102012785 AGCD01028760;AGCD01028761;GBBH01032046;GBCE01001858;XM_005387002 XP_005387059 MODEL 8859967 protein-coding Inava innate immunity activator INVOLVED IN adherens junction maintenance (ortholog); innate immune response (ortholog); intestinal epithelial structure maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955406 37086302 37107221 + 102006977 AGCD01006571;GBDI01027678;XM_005375150;XM_005375151;XM_005375152 XP_005375207;XP_005375208;XP_005375209 MODEL 9009383 pseudo LOC102003295 gonadotropin-releasing hormone receptor pseudogene NW_004955447 5170735 5171274 + 102003295 AGCD01040747;XM_005392953 MODEL 8866145 protein-coding Esrrb estrogen related receptor beta ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cell population proliferation (ortholog); embryonic placenta development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 35 (ortholog); cholangiocarcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); cytoplasm (ortholog) NW_004955438 365375 534086 + 102029663 AGCD01034946;AGCD01034947;AGCD01034948;AGCD01034949;AGCD01034950;AGCD01034951;GBCQ01188054;XM_005390154;XM_013517291;XM_013517292 XP_005390211;XP_013372745;XP_013372746 MODEL 8906704 protein-coding Tro trophinin INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955475 2266522 2278016 + 102024454 AGCD01054800;GBDK01001381;XM_005401530;XM_013502848;XM_013502849;XM_013502850;XM_013502851;XM_013502852;XM_013502853 XP_005401587;XP_013358302;XP_013358303;XP_013358304;XP_013358305;XP_013358306;XP_013358307 MODEL 8707196 pseudo LOC102008404 RNA-binding protein with serine-rich domain 1 pseudogene NW_004955415 22507523 22528364 - 102008404 AGCD01016538;AGCD01016539 MODEL 8769645 pseudo LOC102011140 thioredoxin pseudogene NW_004955512 2762023 2762354 - 102011140 AGCD01066685 MODEL 8792442 protein-coding LOC102011124 olfactory receptor 2K2 NW_004955419 15925491 15926438 + 102011124 AGCD01020094;XM_013513143 XP_013368597 MODEL 8758771 ncrna LOC102006139 uncharacterized LOC102006139 NW_004955487 380275 384952 - 102006139 AGCD01059217;AGCD01059218;GBDF01221413;XR_263979 MODEL 8966936 protein-coding Retreg3 reticulophagy regulator family member 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); endoplasmic reticulum tubular network organization (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) NW_004955451 16468845 16486773 - 102020406 AGCD01043679;AGCD01043680;GBBH01145983;XM_005394466 XP_005394523 MODEL 8954511 protein-coding Shank1 SH3 and multiple ankyrin repeat domains 1 ENCODES a protein that exhibits ankyrin repeat binding (ortholog); G protein-coupled receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA selective glutamate receptor signaling pathway (ortholog); associative learning (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); excitatory synapse (ortholog) NW_004955559 522466 566275 + 102015463 AGCD01073591;AGCD01073592;AGCD01073593;GBCQ01015314;XM_013508943 XP_013364397 MODEL 8882745 protein-coding Cdh1 cadherin 1 ENCODES a protein that exhibits alpha-catenin binding (ortholog); ankyrin binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adherens junction organization (ortholog); bicellular tight junction assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical junction complex (ortholog) NW_004955484 7782409 7861082 - 102006134 AGCD01058346;AGCD01058347;AGCD01058348;AGCD01058349;AGCD01058350;AGCD01058351;AGCD01058352;GBBH01002202;GBCE01028842;XM_013503937 XP_013359391 MODEL 8894665 pseudo LOC102009162 Krueppel-like factor 3 pseudogene NW_004955412 32434354 32435058 - 102009162 AGCD01013355;XR_260036 MODEL 8802364 protein-coding Pnliprp2 pancreatic lipase related protein 2 ENCODES a protein that exhibits calcium ion binding (ortholog); galactolipase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN cellular defense response (ortholog); galactolipid catabolic process (ortholog); intestinal lipid catabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog); neuron projection (ortholog); zymogen granule membrane (ortholog) NW_004955431 21425345 21442979 + 102023834 AGCD01030496;GBDJ01313541;XM_005387853 XP_005387910 MODEL 39131787 rrna 5S_rRNA 5S ribosomal RNA 8877326 protein-coding Runx3 RUNX family transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); cell maturation (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); ankylosing spondylitis (ortholog); FOUND IN chromatin (ortholog); core-binding factor complex (ortholog); cytoplasm (ortholog) NW_004955452 4580444 4606820 - 102015800 AGCD01043986;GBDI01170141;GBDI01227289;XM_013519718 XP_013375172 MODEL 9036422 protein-coding Angptl6 angiopoietin like 6 ASSOCIATED WITH COVID-19 (ortholog); gestational diabetes (ortholog); hepatocellular carcinoma (ortholog); FOUND IN secretory granule (ortholog) NW_004955495 1437024 1446328 - 102026544 AGCD01061691;AGCD01061692;GBBH01135211;GBDF01122182;XM_013505314;XM_013505315 XP_013360768;XP_013360769 MODEL 8965806 protein-coding Sp8 Sp8 transcription factor ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN dorsal/ventral pattern formation (ortholog); embryonic limb morphogenesis (ortholog); proximal/distal pattern formation (ortholog) NW_004955410 23401888 23404654 - 102004254 AGCD01011100;AGCD01011101;GBDF01128758;XM_013510495 XP_013365949 MODEL 9038190 ncrna LOC102008799 uncharacterized LOC102008799 NW_004955402 56514337 56517087 + 102008799 AGCD01001468;GBDF01212633;XR_259105 MODEL 8845281 ncrna LOC102022616 uncharacterized LOC102022616 NW_004955423 16800375 16816919 + 102022616 AGCD01023839;GBDF01251583;XR_260974 MODEL 155598685 protein-coding AKAP17A A-kinase anchoring protein 17A 8776082 protein-coding Wnt10a Wnt family member 10A ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); epidermis morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Arthralgia (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955453 14528373 14540801 - 102030594 AGCD01044868;AGCD01044869;GBDJ01300231;XM_005395620 XP_005395677 MODEL 10322069 ncrna LOC106147412 uncharacterized LOC106147412 NW_004955555 1293558 1294139 + 106147412 AGCD01073070;GBDK01203640;XR_001232310 MODEL 8887047 protein-coding LOC102009953 uncharacterized LOC102009953 NW_004955489 8135465 8209866 - 102009953 AGCD01060001;AGCD01060002;AGCD01060003;AGCD01060004;AGCD01060005;AGCD01060006;AGCD01060007;GBDJ01241202;XM_013504450 XP_013359904 MODEL 8799909 ncrna LOC102012792 uncharacterized LOC102012792 NW_004955514 558603 620325 + 102012792 AGCD01067014;AGCD01067015;AGCD01067016;GBDF01088853;XR_001231784;XR_264491 MODEL 9018333 protein-coding Champ1 chromosome alignment maintaining phosphoprotein 1 INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); protein localization to kinetochore (ortholog); protein localization to microtubule (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); allergic disease (ortholog); FOUND IN condensed chromosome (ortholog); kinetochore (ortholog); nuclear body (ortholog) NW_004955404 3228 14695 - 102025204 AGCD01003193;GBCQ01154957;XM_005373921;XM_013515422 XP_005373978;XP_013370876 MODEL 8777752 protein-coding LOC102013898 uncharacterized LOC102013898 NW_004955451 15016843 15022852 - 102013898 AGCD01043592;AGCD01043593;GBDI01270044;XM_013519357;XM_013519358;XR_001235980 XP_013374811;XP_013374812 MODEL 9019631 protein-coding Arhgap8 Rho GTPase activating protein 8 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell migration (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog) NW_004955413 29385840 29434345 + 102025450 AGCD01014583;AGCD01014584;GBBH01208530;XM_005379469;XM_005379471;XM_013511540;XM_013511542 XP_005379526;XP_005379528;XP_013366994;XP_013366996 MODEL 39133875 misc_rna 7SK 7SK RNA 8824466 protein-coding Dnajc22 DnaJ heat shock protein family (Hsp40) member C22 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955500 8150186 8154905 + 102030215 AGCD01063981;GBBH01171388;XM_013505629 XP_013361083 MODEL 9057163 protein-coding Actn2 actinin alpha 2 ENCODES a protein that exhibits actin filament binding (ortholog); channel activator activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament uncapping (ortholog); cardiac muscle cell development (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); bicuspid aortic valve disease (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); filopodium (ortholog); focal adhesion (ortholog) NW_004955492 3483704 3554831 - 102016925 AGCD01060698;GBDI01007507;XM_005404929 XP_005404986 MODEL 8962258 protein-coding Clxn calaxin INVOLVED IN regulation of cilium movement (ortholog); regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH primary ciliary dyskinesia 53 (ortholog); thymoma (ortholog); urinary bladder cancer (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) NW_004955454 8570014 8591904 - 102024424 AGCD01045325;GBCE01059363;XM_005396042;XM_005396043;XM_005396044;XM_013520218;XR_262782;XR_262783 XP_005396099;XP_005396100;XP_005396101;XP_013375672 MODEL 8776538 protein-coding Lrrc14b leucine rich repeat containing 14B ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955504 9559 13238 + 102016826 AGCD01064813;GBDF01145974;XM_005406982 XP_005407039 MODEL 8924153 protein-coding Prps1 phosphoribosyl pyrophosphate synthetase 1 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); AMP biosynthetic process (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arts syndrome (ortholog); aspiration pneumonia (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) NW_004955490 8303775 8330713 - 102019073 AGCD01060279;AGCD01060280;GBBH01207860;XM_005404697 XP_005404754 MODEL 8961551 protein-coding Ado 2-aminoethanethiol dioxygenase ENCODES a protein that exhibits cysteamine dioxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); taurine biosynthetic process (ortholog); PARTICIPATES IN taurine and hypotaurine metabolic pathway; FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955425 16049194 16052275 + 102022832 AGCD01025594;GBBH01005931;XM_005385953 XP_005386010 MODEL 8939432 ncrna LOC102007257 uncharacterized LOC102007257 NW_004955510 4095118 4095706 - 102007257 AGCD01066254;GBDF01078004;XR_264407 MODEL 8752015 protein-coding Cachd1 cache domain containing 1 ENCODES a protein that exhibits channel activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN neurogenesis (ortholog); positive regulation of protein localization to cell surface (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955423 25675396 25818924 - 102026993 AGCD01024083;AGCD01024084;AGCD01024085;GBBH01163494;XM_013514449;XM_013514450;XM_013514451 XP_013369903;XP_013369904;XP_013369905 MODEL 8765754 ncrna LOC102014290 uncharacterized LOC102014290 NW_004955441 6783381 6790395 - 102014290 AGCD01036941;AGCD01036942;GBDF01251741;XR_262053 MODEL 9007630 protein-coding Abhd2 abhydrolase domain containing 2, acylglycerol lipase ENCODES a protein that exhibits acetylesterase activity (ortholog); diacylglycerol lipase activity (ortholog); hormone binding (ortholog); INVOLVED IN acrosome reaction (ortholog); acylglycerol catabolic process (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); sperm flagellum (ortholog); sperm plasma membrane (ortholog) NW_004955416 15878972 15983322 - 102004383 AGCD01017346;AGCD01017347;AGCD01017348;GBDK01278438;XM_005381560 XP_005381617 MODEL 8723365 pseudo LOC102011967 serine-rich single-pass membrane protein 1-like NW_004955411 5417085 5417628 - 102011967 AGCD01011638 MODEL 39132525 rrna 5S_rRNA 5S ribosomal RNA 8919582 protein-coding Atp5f1c ATP synthase F1 subunit gamma ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to nitric oxide (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955421 24234473 24253640 + 102008541 AGCD01022209;GBDF01008934;XM_005383875;XM_005383876;XM_005383877;XM_013513724 XP_005383932;XP_005383933;XP_005383934;XP_013369178 MODEL 8849684 pseudo LOC102006140 C-Myc-binding protein pseudogene NW_004955488 2573938 2602551 + 102006140 AGCD01059547 MODEL 9066181 ncrna LOC102007630 uncharacterized LOC102007630 NW_004955457 12213711 12215439 + 102007630 AGCD01047004;GBCQ01183768;XR_262943 MODEL 9032967 protein-coding LOC102009166 TRIO and F-actin-binding protein-like NW_004955413 24091962 24110422 + 102009166 AGCD01014347;AGCD01014348;XM_013511302 XP_013366756 MODEL 8924647 pseudo LOC102018563 tubulin alpha-1 chain-like NW_004955406 11720895 11730389 + 102018563 AGCD01005894;XM_005375458 MODEL 9031308 protein-coding Shank2 SH3 and multiple ankyrin repeat domains 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); SH3 domain binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN adult behavior (ortholog); adult locomotory behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); ciliary membrane (ortholog) NW_004955422 15295800 15818067 + 102018504 AGCD01022876;AGCD01022877;AGCD01022878;AGCD01022879;AGCD01022880;AGCD01022881;AGCD01022882;GBBH01227949;XM_013514155;XM_013514156;XM_013514157 XP_013369609;XP_013369610;XP_013369611 MODEL 39131788 rrna 5S_rRNA 5S ribosomal RNA 9041885 protein-coding B9d2 B9 domain containing 2 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH ciliopathy (ortholog); epilepsy (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955555 288919 295861 - 102015459 AGCD01073024;GBDK01361917;XM_005412340;XM_005412341 XP_005412397;XP_005412398 MODEL 8933203 protein-coding Angptl7 angiopoietin like 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of vasculature development involved in avascular cornea development in camera-type eye (ortholog); regulation of extracellular matrix organization (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 2539781 2545630 - 102011011 AGCD01058999;GBCB01111542;XM_005404003 XP_005404060 MODEL 8739315 protein-coding LOC102004343 general transcription factor II-I repeat domain-containing protein 1-like NW_004955402 7011600 7036323 - 102004343 AGCD01000164;AGCD01000165;GBDJ01109813;XM_005373133 XP_005373190 MODEL 8958804 protein-coding LOC102022617 olfactory receptor 7E24-like NW_004955495 644019 644993 - 102022617 AGCD01061645;XM_005406123 XP_005406180 MODEL 9043837 ncrna LOC102012371 uncharacterized LOC102012371 NW_004955443 10531041 10537221 - 102012371 AGCD01038378;GBBH01158501;XR_001235449 MODEL 8809063 protein-coding Sp9 Sp9 transcription factor ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic limb morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog) NW_004955449 1003462 1006023 - 102007715 AGCD01041780;AGCD01041781;XM_005393191 XP_005393248 MODEL 9019323 protein-coding Ccdc191 coiled-coil domain containing 191 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955427 14060863 14138850 - 102007791 AGCD01027266;AGCD01027267;GBBH01198044;XM_005386409 XP_005386466 MODEL 9011577 protein-coding Akap19 A-kinase anchoring protein 19 ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 8797416 8847431 - 102003714 AGCD01001889;AGCD01001890;AGCD01001891;AGCD01001892;AGCD01001893;AGCD01001894;AGCD01001895;GBDF01008336;XM_005373308;XM_005373309;XM_005373311 XP_005373365;XP_005373366;XP_005373368 MODEL 8927254 protein-coding Cenpu centromere protein U INVOLVED IN chordate embryonic development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); inner kinetochore (ortholog) NW_004955403 24245197 24278631 + 102004661 AGCD01002271;GBBH01173741;XM_005373484 XP_005373541 MODEL 8870085 protein-coding Fmc1 formation of mitochondrial complex V assembly factor 1 INVOLVED IN apoptotic mitochondrial changes (ortholog); dopaminergic neuron differentiation (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH Parkinson's Disease, Mitochondrial (ortholog); secondary Parkinson disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955494 3722359 3730217 - 102028308 AGCD01061481;GBDJ01007860;XM_005405445;XM_013504962;XM_013504963;XM_013504965 XP_005405502;XP_013360416;XP_013360417;XP_013360419 MODEL 8920226 pseudo LOC102003297 MICOS complex subunit MIC27 pseudogene NW_004955449 412796 415575 + 102003297 AGCD01041765 MODEL 8707836 protein-coding Slc51a solute carrier family 51 member A ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholestasis (ortholog); cognitive disorder (ortholog); FOUND IN basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955420 12452562 12463369 + 102009507 AGCD01020865;GBDF01222832;XM_005383122;XM_005383123;XM_013513396;XM_013513397 XP_005383179;XP_005383180;XP_013368850;XP_013368851 MODEL 8804296 protein-coding Troap trophinin associated protein ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955500 8129031 8137235 + 102016493 AGCD01063981;GBDF01084874;XM_005406696;XM_005406697;XM_005406698;XM_005406699 XP_005406753;XP_005406754;XP_005406755;XP_005406756 MODEL 8926718 pseudo LOC102011145 protein salvador homolog 1 pseudogene NW_004955532 3962130 3963932 - 102011145 AGCD01070305 MODEL 8748194 ncrna LOC102008409 uncharacterized LOC102008409 NW_004955477 11222230 11223234 + 102008409 AGCD01055725;GBBH01224847;XR_263677 MODEL 8740345 protein-coding Esrrg estrogen related receptor gamma ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); estrogen response element binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); congenital nonprogressive movement disorder with ataxia and eye movement abnormalities (ortholog); Fetal Growth Retardation (ortholog) NW_004955406 1260240 1784652 + 102009797 AGCD01005630;AGCD01005631;AGCD01005632;AGCD01005633;AGCD01005634;AGCD01005635;AGCD01005636;GBCB01100801;XM_005374714;XM_013519877;XM_013519883;XM_013519891;XM_013519896;XM_013519901;XM_013519909;XM_013519919;XM_013519926 XP_005374771;XP_013375331;XP_013375337;XP_013375345;XP_013375350;XP_013375355;XP_013375363;XP_013375373;XP_013375380 MODEL 8762203 protein-coding Bad BCL2 associated agonist of cell death ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); cysteine-type endopeptidase activator activity (ortholog); lipid binding (ortholog); INVOLVED IN ADP metabolic process (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN BAD-BCL-2 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 20795585 20809039 + 102014914 AGCD01023087;AGCD01023088;AGCD01023089;GBDF01008867;XM_005384615;XM_005384616;XM_005384617;XM_005384618;XM_005384619;XM_005384620;XM_013514299 XP_005384672;XP_005384673;XP_005384674;XP_005384675;XP_005384676;XP_005384677;XP_013369753 MODEL 8795625 protein-coding LOC102014291 natural resistance-associated macrophage protein 2 NW_004955547 1495286 1524795 - 102014291 AGCD01072226;AGCD01072227;GBDJ01050751;XM_013508458 XP_013363912 MODEL 8849085 protein-coding Cdh10 cadherin 10 INVOLVED IN synaptic membrane adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic specialization membrane (ortholog) NW_004955426 11803669 11974051 - 102015545 AGCD01026322;AGCD01026323;AGCD01026324;GBDF01290123;XM_005386142 XP_005386199 MODEL 8886726 protein-coding Brwd1 bromodomain and WD repeat domain containing 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN axoneme (ortholog); motile cilium (ortholog); nucleolus (ortholog) NW_004955407 38003386 38107958 - 102022466 AGCD01007792;AGCD01007793;AGCD01007794;GBCB01009000;GBDJ01213321;XM_013504832;XM_013504835;XM_013504839 XP_013360286;XP_013360289;XP_013360293 MODEL 8998604 protein-coding Retsat retinol saturase ENCODES a protein that exhibits all-trans-retinol 13,14-reductase activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); retinol metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog); nuclear outer membrane (ortholog) NW_004955424 2107602 2122029 + 102004946 AGCD01024262;AGCD01024263;GBDF01226131;XM_005385436 XP_005385493 MODEL 8754799 protein-coding Rusc1 RUN and SH3 domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955545 1765364 1773889 + 102006825 AGCD01071869;GBDK01118008;XM_013508229;XM_013508230;XM_013508231;XM_013508232;XM_013508233 XP_013363683;XP_013363684;XP_013363685;XP_013363686;XP_013363687 MODEL 39131658 rrna 5S_rRNA 5S ribosomal RNA 8904815 protein-coding Inca1 inhibitor of CDK, cyclin A1 interacting protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of apoptotic signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955467 10391957 10397212 - 102025339 AGCD01051562;GBCB01087285;GBDJ01290751;XM_013522077 XP_013377531 MODEL 8971678 protein-coding Wnt10b Wnt family member 10B INVOLVED IN bone trabecula formation (ortholog); canonical Wnt signaling pathway (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN extracellular region (ortholog) NW_004955500 7782782 7800281 - 102010818 AGCD01063946;AGCD01063947;AGCD01063948;GBDI01165157;XM_005406675;XM_005406676;XM_005406677;XM_005406678;XM_005406679;XM_013505648 XP_005406732;XP_005406733;XP_005406734;XP_005406735;XP_005406736;XP_013361102 MODEL 9043808 ncrna LOC102009955 uncharacterized LOC102009955 NW_004955490 5851097 5894388 + 102009955 AGCD01060211;GBDK01242204;XR_001231206;XR_001231207;XR_264028 MODEL 8705385 protein-coding LOC102021910 olfactory receptor 10C1-like NW_004955524 278339 279310 + 102021910 AGCD01068674;XM_005409658 XP_005409715 MODEL 8843085 protein-coding LOC102011127 zinc finger protein 852 NW_004955420 26958234 26960564 + 102011127 AGCD01021441;XM_013513349 XP_013368803 MODEL 10147444 ncrna LOC106147413 uncharacterized LOC106147413 NW_004955555 340650 344365 - 106147413 AGCD01073024;GBBH01066023;XR_001232311 MODEL 8917209 protein-coding Chat choline O-acetyltransferase ENCODES a protein that exhibits choline binding (ortholog); choline O-acetyltransferase activity (ortholog); INVOLVED IN acetylcholine biosynthetic process (ortholog); adult walking behavior (ortholog); antral ovarian follicle growth (ortholog); PARTICIPATES IN acetylcholine metabolic pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); Alzheimer's disease (ortholog); angle-closure glaucoma (ortholog); FOUND IN neuronal cell body; axon (ortholog); cytoplasm (ortholog) NW_004955556 650290 695135 - 102028690 AGCD01073178;AGCD01073179;XM_005412567 XP_005412624 MODEL 8906453 protein-coding Col6a6 collagen type VI alpha 6 chain ASSOCIATED WITH cervical cancer (ortholog); congenital myopathy (ortholog); esophageal cancer (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955501 7683344 7816859 - 102014691 AGCD01064221;AGCD01064222;AGCD01064223;GBDJ01421649;XM_005406861;XM_013505758;XM_013505759;XM_013505760 XP_005406918;XP_013361212;XP_013361213;XP_013361214 MODEL 8781934 pseudo LOC102006517 vegetative cell wall protein gp1-like NW_004955588 440381 447451 - 102006517 AGCD01076110 MODEL 39133877 misc_rna 7SK 7SK RNA 39133876 misc_rna 7SK 7SK RNA 8742575 protein-coding Pnma2 PNMA family member 2 ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955403 49183280 49184855 - 102027806 AGCD01002935;XM_005415298 XP_005415355 MODEL 9053819 protein-coding Trpa1 transient receptor potential cation channel subfamily A member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); plasma membrane (ortholog) NW_004955444 7876284 7922010 + 102027018 AGCD01038922;GBCQ01156908;XM_005392098 XP_005392155 MODEL 9067247 protein-coding Arhgap9 Rho GTPase activating protein 9 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955458 5193708 5201625 - 102029482 AGCD01047467;GBBH01142430;XM_005397379;XM_005397384;XM_013520879;XM_013520880;XM_013520881;XM_013520882;XM_013520883 XP_005397436;XP_005397441;XP_013376333;XP_013376334;XP_013376335;XP_013376336;XP_013376337 MODEL 8823994 protein-coding LOC102008803 vomeronasal type-1 receptor 4-like NW_004955603 30312 31232 - 102008803 AGCD01076804;XM_005414841 XP_005414898 MODEL 8930147 protein-coding Shank3 SH3 and multiple ankyrin repeat domains 3 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA glutamate receptor clustering (ortholog); associative learning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN ciliary membrane (ortholog); glutamatergic synapse (ortholog); neuron projection (ortholog) NW_004955413 33660025 33714649 + 102015943 AGCD01014686;AGCD01014687;AGCD01014688;GBDI01163328;GBDK01181044;XM_005379674 XP_005379731 MODEL 8798891 protein-coding Dnajc24 DnaJ heat shock protein family (Hsp40) member C24 ENCODES a protein that exhibits ATPase activator activity (ortholog); ferrous iron binding (ortholog); zinc ion binding (ortholog); INVOLVED IN protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955476 9742909 9780321 + 102022695 AGCD01055396;AGCD01055397;GBDF01121205;XM_005401768;XM_005401769 XP_005401825;XP_005401826 MODEL 8906041 protein-coding Chchd6 coiled-coil-helix-coiled-coil-helix domain containing 6 INVOLVED IN cristae formation (ortholog); DNA damage response (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955429 16546397 16786139 - 102022626 AGCD01028834;AGCD01028835;AGCD01028836;GBDJ01187901;XM_005387259;XM_013515549;XM_013515550;XM_013515551;XM_013515552 XP_005387316;XP_013371003;XP_013371004;XP_013371005;XP_013371006 MODEL 8718522 ncrna LOC102012794 uncharacterized LOC102012794 NW_004955515 468692 476022 + 102012794 AGCD01067199;GBDF01281122;XR_264518 MODEL 8728972 pseudo LOC102012373 ubiquitin-conjugating enzyme E2 Q1 pseudogene NW_004955444 9094091 9096386 + 102012373 AGCD01038958 MODEL 8940055 protein-coding Akap3 A-kinase anchoring protein 3 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); motile cilium (ortholog); sperm fibrous sheath (ortholog) NW_004955413 2411618 2432658 - 102005353 AGCD01013545;AGCD01013546;GBDF01008114;XM_005378739 XP_005378796 MODEL 9040141 protein-coding Cenpv centromere protein V ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN ameboidal-type cell migration (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); kinetochore (ortholog); microtubule cytoskeleton (ortholog) NW_004955467 1657765 1669758 - 102029494 AGCD01051272;GBBH01005792;GBCQ01068615;XM_013522048 XP_013377502 MODEL 8960992 protein-coding Lrrc15 leucine rich repeat containing 15 ENCODES a protein that exhibits collagen binding (ortholog); fibronectin binding (ortholog); laminin binding (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); negative regulation of protein localization to plasma membrane (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); glutamatergic synapse (ortholog) NW_004955420 14401080 14410277 + 102030318 AGCD01020944;GBDJ01246683;XM_005383195;XM_005383196 XP_005383252;XP_005383253 MODEL 8997881 protein-coding LOC102005068 olfactory receptor 8K3-like NW_004955511 1446139 1447077 + 102005068 AGCD01066367;XM_005407961 XP_005408018 MODEL 8711177 pseudo LOC102012383 zinc finger protein 132-like NW_004955584 1075427 1081804 - 102012383 AGCD01075978;XR_265112;XR_265113 MODEL 9064812 protein-coding Wnt11 Wnt family member 11 ENCODES a protein that exhibits protein kinase activator activity (ortholog); INVOLVED IN adrenal gland development (ortholog); artery morphogenesis (ortholog); atrial septum development (ortholog); PARTICIPATES IN the Wnt/calcium signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); Animal Disease Models (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955414 15674478 15694758 + 102020902 AGCD01015187;AGCD01015188;GBDK01241149;XM_005379875;XM_005379876;XM_013512079 XP_005379932;XP_005379933;XP_013367533 MODEL 8809824 protein-coding Atp5f1d ATP synthase F1 subunit delta ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN aerobic respiration (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Aortic Calcification (ortholog); Cardiomegaly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955495 6664394 6666693 - 102011018 AGCD01062087;GBDJ01021003;XM_005405992;XM_005405993 XP_005406049;XP_005406050 MODEL 9045286 pseudo LOC102014297 ferritin light chain pseudogene NW_004955442 16402352 16402854 + 102014297 AGCD01037900 MODEL 39133878 misc_rna 7SK 7SK RNA 8834040 protein-coding Baalc BAALC binder of MAP3K1 and KLF4 ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane raft (ortholog) NW_004955417 27426764 27436620 + 102020913 AGCD01018555;AGCD01018556;GBCE01034603;GBDF01013252;XM_013512841 XP_013368295 MODEL 8998189 protein-coding Cdh11 cadherin 11 INVOLVED IN aortic valve formation (ortholog); cell migration (ortholog); cell-substrate adhesion (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Elsahy-Waters syndrome (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955433 21613909 21770968 - 102019097 AGCD01031928;AGCD01031929;AGCD01031930;GBCE01004160;XM_005388459;XM_005388460;XM_013516243 XP_005388516;XP_005388517;XP_013371697 MODEL 9011920 protein-coding Brwd3 bromodomain and WD repeat domain containing 3 ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); asthma (ortholog) NW_004955529 834459 992259 - 102018130 AGCD01069659;AGCD01069660;AGCD01069661;AGCD01069662;AGCD01069663;AGCD01069664;GBDK01342474;XM_005410071 XP_005410128 MODEL 8890366 protein-coding Actn3 actinin alpha 3 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); focal adhesion assembly (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN brush border (ortholog); focal adhesion (ortholog); sarcomere (ortholog) NW_004955422 18799372 18812458 - 102007909 AGCD01022961;GBCB01004475;XM_005384391 XP_005384448 MODEL 9004906 protein-coding Angptl8 angiopoietin like 8 ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN cell maturation (ortholog); fat cell differentiation (ortholog); glucose metabolic process (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 2205424 2207611 + 102016286 AGCD01061753;GBDJ01401913;XM_005405640;XM_013505180 XP_005405697;XP_013360634 MODEL 8933218 protein-coding Rev1 REV1 DNA directed polymerase ENCODES a protein that exhibits deoxycytidyl transferase activity (ortholog); DNA binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); error-prone translesion synthesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nuclear replication fork (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955470 5677222 5738362 - 102013164 AGCD01052758;AGCD01052759;GBDJ01313280;XM_005400749;XM_005400750;XM_005400751 XP_005400806;XP_005400807;XP_005400808 MODEL 8949061 protein-coding Prps1l1 phosphoribosyl pyrophosphate synthetase 1 like 1 INVOLVED IN male gonad development (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway NW_004955410 20987289 20988852 - 102024983 AGCD01011054;GBDF01044095;XM_005377343 XP_005377400 MODEL 9044235 ncrna LOC102003298 uncharacterized LOC102003298 NW_004955449 5422486 5428279 - 102003298 AGCD01041932;AGCD01041933;GBDF01075789;XR_262489 MODEL 8979304 pseudo LOC102013900 putative C-mannosyltransferase DPY19L2P2 NW_004955452 10407032 10408684 + 102013900 AGCD01044275 MODEL 8817877 protein-coding Incenp inner centromere protein ENCODES a protein that exhibits molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN central element (ortholog); chromocenter (ortholog); chromosome passenger complex (ortholog) NW_004955511 5705948 5724167 - 102006057 AGCD01066576;AGCD01066577;GBBH01050425;XM_005408127;XM_005408128 XP_005408184;XP_005408185 MODEL 8728904 protein-coding Adora1 adenosine A1 receptor ENCODES a protein that exhibits G protein-coupled adenosine receptor activity (ortholog); G protein-coupled receptor binding (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN response to auditory stimulus; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cognition (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); Bradycardia (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN asymmetric synapse (ortholog); axolemma (ortholog); basolateral plasma membrane (ortholog) NW_004955406 39148811 39183577 + 102009685 AGCD01006621;GBDJ01197471;XM_013522558;XM_013522560;XM_013522562;XM_013522567;XM_013522569;XM_013522572;XM_013522574 XP_013378012;XP_013378014;XP_013378016;XP_013378021;XP_013378023;XP_013378026;XP_013378028 MODEL 8817271 protein-coding Slc51b SLC51 subunit beta ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); protein heterodimerization activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid secretion (ortholog); ASSOCIATED WITH cholestasis (ortholog); cognitive disorder (ortholog); Diabetes Complications (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955450 10365554 10374209 - 102009562 AGCD01042614;AGCD01042615;GBCQ01066742;XM_005393727 XP_005393784 MODEL 8813518 protein-coding Ess2 ess-2 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); nervous system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); DiGeorge syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog) NW_004955442 18829037 18840542 + 102012369 AGCD01038021;AGCD01038022;GBDF01125719;XM_005391788 XP_005391845 MODEL 9049584 pseudo LOC102008412 transmembrane protein 208 pseudogene NW_004955417 13153802 13154322 + 102008412 AGCD01018172 MODEL 8919989 pseudo LOC102021911 protein kinase C iota type pseudogene NW_004955435 4713737 4714888 - 102021911 AGCD01032843 MODEL 8976032 pseudo LOC102006141 BAG family molecular chaperone regulator 5-like NW_004955492 7211744 7213061 + 102006141 AGCD01060779 MODEL 8970043 ncrna LOC102007631 uncharacterized LOC102007631 NW_004955408 21175728 21206688 - 102007631 AGCD01008553;GBDF01153618;XR_001232359;XR_001232366;XR_259693;XR_259694;XR_259695 MODEL 8931997 protein-coding Chchd7 coiled-coil-helix-coiled-coil-helix domain containing 7 ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955454 15284114 15286761 + 102012728 AGCD01045491;GBBH01141590;GBDK01186701;XM_013520257 XP_013375711 MODEL 8818132 pseudo LOC102018568 tripartite motif-containing protein 44 pseudogene NW_004955407 42667907 42670883 + 102018568 AGCD01007895 MODEL 39131789 rrna 5S_rRNA 5S ribosomal RNA 8826247 protein-coding Col7a1 collagen type VII alpha 1 chain ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN collagen fibril organization (ortholog); endodermal cell differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); anemia (ortholog); atrial fibrillation (ortholog); FOUND IN basement membrane (ortholog) NW_004955532 650913 681186 - 102028464 AGCD01070143;GBBH01050641;XM_013507646 XP_013363100 MODEL 8933198 ncrna LOC102009168 uncharacterized LOC102009168 NW_004955471 210298 228033 - 102009168 AGCD01052952;GBDF01209473;XR_263509 MODEL 8701722 protein-coding Chchd1 coiled-coil-helix-coiled-coil-helix domain containing 1 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955437 18117090 18118586 - 102013006 AGCD01034774;GBDK01143051;XM_005389962 XP_005390019 MODEL 9062220 ncrna LOC102009188 uncharacterized LOC102009188 NW_004955420 29161260 29164099 + 102009188 AGCD01021493;GBDJ01119670;XR_260772 MODEL 8743223 protein-coding LOC102021913 melanoma-associated antigen B1-like NW_004955531 838720 839739 - 102021913 AGCD01070014;XM_005410143 XP_005410200 MODEL 8939868 protein-coding Arhgdia Rho GDP dissociation inhibitor alpha ENCODES a protein that exhibits fatty acid binding (ortholog); Hsp90 protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to redox state (ortholog); negative regulation of cell migration (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955506 1297604 1300072 + 102025601 AGCD01065255;AGCD01065256;GBDI01015947;XM_005407251;XM_013506076 XP_005407308;XP_013361530 MODEL 8895333 pseudo LOC102008806 28S ribosomal protein S36, mitochondrial pseudogene NW_004955451 2025250 2026677 + 102008806 AGCD01043004;XM_005393966 MODEL 9038745 protein-coding Pnmt phenylethanolamine N-methyltransferase ENCODES a protein that exhibits phenylethanolamine N-methyltransferase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Contusions (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955451 14414836 14417972 + 102028817 AGCD01043552;GBCB01077385;XM_005394315;XM_005394316 XP_005394372;XP_005394373 MODEL 39131421 protein-coding CCDC195 coiled-coil domain containing 195 8758181 protein-coding Rusc2 RUN and SH3 domain containing 2 ENCODES a protein that exhibits small GTPase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 61 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955472 698021 742966 - 102011981 AGCD01053351;AGCD01053352;AGCD01053353;AGCD01053354;GBBH01088464;GBDI01256209;XM_013522959 XP_013378413 MODEL 8866424 protein-coding Cacna1a calcium voltage-gated channel subunit alpha1 A ENCODES a protein that exhibits calmodulin binding (ortholog); high voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Alternating Hemiplegia of Childhood 1 (ortholog); FOUND IN dendrite; neuronal cell body; calyx of Held (ortholog) NW_004955415 32182536 32457511 - 102014559 AGCD01016714;AGCD01016715;AGCD01016716;AGCD01016717;AGCD01016718;AGCD01016719;AGCD01016720;AGCD01016721;GBDI01088844;GBDI01386674;XM_013512132 XP_013367586 MODEL 8942737 protein-coding Fmn1 formin 1 ENCODES a protein that exhibits microtubule binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); forelimb morphogenesis (ortholog); gene expression (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955416 1365797 1774025 + 102026105 AGCD01016834;AGCD01016835;AGCD01016836;AGCD01016837;AGCD01016838;AGCD01016839;AGCD01016840;GBDF01084814;XM_005381169;XM_005381170;XM_005381171;XM_005381172;XM_005381173;XM_013512614 XP_005381226;XP_005381227;XP_005381228;XP_005381229;XP_005381230;XP_013368068 MODEL 8753426 pseudo LOC102009960 guanylate-binding protein 6-like NW_004955423 4772863 4789903 + 102009960 AGCD01023545 MODEL 8943241 protein-coding LOC102011150 uncharacterized LOC102011150 NW_004955440 3381418 3382941 - 102011150 AGCD01036241;GBDF01052510;XM_005390767;XM_013517492 XP_005390824;XP_013372946 MODEL 8741246 protein-coding Sharpin SHANK associated RH domain interactor ENCODES a protein that exhibits identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic nuclear changes (ortholog); defense response to bacterium (ortholog); epidermis development (ortholog); PARTICIPATES IN integrin mediated signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH atopic dermatitis (ortholog); AUTOINFLAMMATION WITH EPISODIC FEVER AND IMMUNE DYSREGULATION (ortholog); dermatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955454 2761725 2765929 - 102025652 AGCD01045033;GBDK01082298;XM_005395857;XR_001236235 XP_005395914 MODEL 8834490 protein-coding LOC102011130 chromosome unknown open reading frame, human C20orf173 ASSOCIATED WITH esophageal cancer (ortholog) NW_004955422 25895181 25897125 + 102011130 AGCD01023269;AGCD01023270;GBDF01017778;XM_005384792 XP_005384849 MODEL 8857530 pseudo LOC102006520 pinin-like NW_004955402 55201413 55203705 - 102006520 AGCD01001428 MODEL 8891940 protein-coding LOC102004346 ADP/ATP translocase 3-like NW_004956002 67 3761 + 102004346 AGCD01078844;AGCD01078845;GBCC01015784;GBDJ01370059;XM_013510213 XP_013365667 MODEL 8904492 ncrna LOC102006143 uncharacterized LOC102006143 NW_004955493 8176730 8196458 - 102006143 AGCD01061275;AGCD01061276;AGCD01061277;AGCD01061278;AGCD01061279;AGCD01061280;GBDK01245153;XR_001231286;XR_001231287;XR_264097 MODEL 8895466 protein-coding Spa17 sperm autoantigenic protein 17 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); Merkel cell carcinoma (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); external side of plasma membrane (ortholog) NW_004955412 25741369 25753681 + 102011188 AGCD01013173;GBDF01006464;XM_005378430 XP_005378487 MODEL 39132527 rrna 5S_rRNA 5S ribosomal RNA 9003011 pseudo LOC102012374 methyl-CpG-binding domain protein 3-like 2 pseudogene NW_004955563 759987 761698 + 102012374 AGCD01074086;XM_005413203 MODEL 8731328 protein-coding Dnajc27 DnaJ heat shock protein family (Hsp40) member C27 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955469 7046671 7078666 - 102003431 AGCD01052405;GBDF01185604;XM_013522664 XP_013378118 MODEL 8917663 protein-coding Anhx anomalous homeobox ASSOCIATED WITH esophageal cancer (ortholog) NW_004955482 3083 9557 - 102021662 AGCD01057159;XM_005403232 XP_005403289 MODEL 8897503 ncrna LOC102021918 uncharacterized LOC102021918 NW_004955438 17912640 17920107 - 102021918 AGCD01035456;XR_261946 MODEL 8993496 protein-coding Bscl2 BSCL2 lipid droplet biogenesis associated, seipin ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cytosolic lipolysis (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Asthenozoospermia (ortholog); autosomal dominant distal hereditary motor neuronopathy 13 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955599 505725 514225 + 102011605 AGCD01076654;GBDJ01021043;XM_013510053;XM_013510054;XM_013510055;XM_013510056 XP_013365507;XP_013365508;XP_013365509;XP_013365510 MODEL 8995749 protein-coding LOC102012796 vomeronasal type-2 receptor 116-like NW_004955524 3477585 3506250 - 102012796 AGCD01068903;AGCD01068904;AGCD01068905;GBDJ01017969;XM_013507196 XP_013362650 MODEL 8874428 protein-coding Rusf1 RUS family member 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955493 8329618 8341009 - 102008546 AGCD01061291;GBCE01000932;XM_005405326 XP_005405383 MODEL 8986360 protein-coding Akap4 A-kinase anchoring protein 4 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); establishment of protein localization (ortholog); flagellated sperm motility (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); male infertility (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cilium (ortholog); motile cilium (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955543 1358086 1367838 + 102016520 AGCD01071620;AGCD01071621;GBDF01006503;XM_005411352 XP_005411409 MODEL 8851640 ncrna LOC102012385 uncharacterized LOC102012385 NW_004955592 538916 543806 - 102012385 AGCD01076317;GBDI01163562;XR_265140 MODEL 8744666 protein-coding Cenpw centromere protein W INVOLVED IN chromosome organization (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) NW_004955436 7557595 7563238 + 102005412 AGCD01033708;GBDK01214350;XM_005389164 XP_005389221 MODEL 8954947 protein-coding Inf2 inverted formin 2 INVOLVED IN actin nucleation (ortholog); gene expression (ortholog); regulation of cellular component size (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955538 3154670 3176510 + 102025725 AGCD01071151;AGCD01071152;GBDK01240114;XM_005410836;XM_005410837;XM_005410838 XP_005410893;XP_005410894;XP_005410895 MODEL 8760570 protein-coding Lrrc17 leucine rich repeat containing 17 INVOLVED IN bone marrow development (ortholog); negative regulation of osteoclast differentiation (ortholog); osteoblast differentiation (ortholog); FOUND IN extracellular region (ortholog) NW_004955410 8093621 8128623 + 102013149 AGCD01010733;GBCE01096496;XM_005377215;XM_013510520 XP_005377272;XP_013365974 MODEL 8935551 ncrna LOC102003639 uncharacterized LOC102003639 NW_004955467 6581757 6582473 - 102003639 AGCD01051417;GBDF01227082;XR_263345 MODEL 39134510 misc_rna 7SK 7SK RNA 9045238 protein-coding Trpc1 transient receptor potential cation channel subfamily C member 1 ENCODES a protein that exhibits ATPase binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); cellular response to hypoxia (ortholog); melanin biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cervical cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cation channel complex (ortholog); costamere (ortholog) NW_004955508 3143868 3211613 - 102013194 AGCD01065805;GBCE01163015;GBDF01158759;XM_005407739 XP_005407796 MODEL 8980989 protein-coding Slc13a3 solute carrier family 13 member 3 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); citrate transmembrane transporter activity (ortholog); dicarboxylic acid transmembrane transporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); citrate transport (ortholog); dicarboxylic acid transport (ortholog); ASSOCIATED WITH Acute Reversible Leukoencephalopathy with Increased Urinary Alpha-ketoglutarate (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955445 10755336 10829797 + 102017174 AGCD01039679;GBDF01074885;XM_005392372;XM_005392373;XM_013518382;XM_013518383;XM_013518384 XP_005392429;XP_005392430;XP_013373836;XP_013373837;XP_013373838 MODEL 9019824 protein-coding Wnt16 Wnt family member 16 INVOLVED IN bone remodeling (ortholog); cardiac epithelial to mesenchymal transition (ortholog); keratinocyte differentiation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955479 3065312 3077260 + 102007764 AGCD01056290;AGCD01056291;GBCE01032577;XM_005402314 XP_005402371 MODEL 8772718 protein-coding Atp5f1e ATP synthase F1 subunit epsilon ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Fluoride Poisoning (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 3 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955445 563642 567865 + 102018537 AGCD01039320;GBDK01015787;XM_005392211 XP_005392268 MODEL 39131790 rrna 5S_rRNA 5S ribosomal RNA 39133879 misc_rna 7SK 7SK RNA 8925355 pseudo LOC102005409 CTD small phosphatase-like protein 2 pseudogene NW_004955520 665791 667200 - 102005409 AGCD01068028 MODEL 8735738 protein-coding Baat bile acid-CoA:amino acid N-acyltransferase ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); choloyl-CoA hydrolase activity (ortholog); glycine N-choloyltransferase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); animal organ regeneration (ortholog); bile acid biosynthetic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); disease of metabolism (ortholog); familial hypercholanemia 1 (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) NW_004955419 24469213 24521728 + 102009722 AGCD01020347;AGCD01020348;AGCD01020349;AGCD01020350;GBCQ01123350;XM_005382802;XM_005382803 XP_005382859;XP_005382860 MODEL 8766113 protein-coding Arhgdib Rho GDP dissociation inhibitor beta ENCODES a protein that exhibits GTPase activity (ortholog); Rho GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to redox state (ortholog); negative regulation of trophoblast cell migration (ortholog); regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955413 11670889 11688357 - 102003529 AGCD01013966;GBCE01001032;XM_005379013 XP_005379070 MODEL 8700638 protein-coding Cdh12 cadherin 12 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog) NW_004955426 9652418 10610762 - 102015218 AGCD01026253;AGCD01026254;AGCD01026255;AGCD01026256;AGCD01026257;AGCD01026258;AGCD01026259;AGCD01026260;AGCD01026261;AGCD01026262;AGCD01026263;AGCD01026264;AGCD01026265;AGCD01026266;AGCD01026267;AGCD01026268;AGCD01026269;AGCD01026270;AGCD01026271;AGCD01026272;AGCD01026273;AGCD01026274;AGCD01026275;AGCD01026276;GBDK01336238;XM_005386141 XP_005386198 MODEL 8839483 protein-coding Prps2 phosphoribosyl pyrophosphate synthetase 2 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); AMP biosynthetic process (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) NW_004955544 480587 512019 - 102030240 AGCD01071705;AGCD01071706;GBCE01044643;XM_005411376 XP_005411433 MODEL 10245666 ncrna LOC106147414 uncharacterized LOC106147414 NW_004955555 2274477 2278858 + 106147414 AGCD01073143;GBDI01199241;XR_001232314 MODEL 8999565 ncrna LOC102013902 uncharacterized LOC102013902 NW_004955406 3835927 3838964 - 102013902 AGCD01005677;GBDF01177185;XR_259472 MODEL 8778277 protein-coding Actn4 actinin alpha 4 ENCODES a protein that exhibits actin filament binding (ortholog); chromatin DNA binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); bicellular tight junction assembly (ortholog); gene expression (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); anchoring junction (ortholog); cell-cell junction (ortholog) NW_004955468 770573 841859 - 102010788 AGCD01051739;AGCD01051740;GBCB01059599;XM_005399834;XM_005399835;XM_013522442 XP_005399891;XP_005399892;XP_013377896 MODEL 9050946 protein-coding Esx1 ESX homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN blood vessel development (ortholog); labyrinthine layer blood vessel development (ortholog); labyrinthine layer morphogenesis (ortholog); ASSOCIATED WITH lung cancer (ortholog); spermatogenic failure 57 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955548 1087441 1095070 - 102004647 AGCD01072356;AGCD01072357;AGCD01072358;GBDF01189839;XM_005412009 XP_005412066 MODEL 8752892 pseudo LOC102008417 serine/threonine-protein kinase Chk1 pseudogene NW_004955484 9066985 9070701 + 102008417 AGCD01058404 MODEL 8850081 protein-coding Cacna1b calcium voltage-gated channel subunit alpha1 B ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); protein phosphatase 2A binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); amblyopia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN basolateral plasma membrane; dendrite; neuron projection terminus NW_004955513 5654915 5823094 + 102019306 AGCD01066980;AGCD01066981;AGCD01066982;AGCD01066983;AGCD01066984;AGCD01066985;AGCD01066986;AGCD01066987;GBDF01025399;GBDF01152901;XM_013506726;XM_013506727;XM_013506728 XP_013362180;XP_013362181;XP_013362182 MODEL 8786262 protein-coding LOC102011152 serine protease 29-like NW_004955442 15971410 15973505 + 102011152 AGCD01037889;XM_005391589 XP_005391646 MODEL 8970793 protein-coding Ank1 ankyrin 1 ENCODES a protein that exhibits ATPase binding (ortholog); cytoskeletal adaptor activity (ortholog); enzyme binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); erythrocyte development (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); ASSOCIATED WITH anemia (ortholog); bone development disease (ortholog); Fever (ortholog); FOUND IN A band (ortholog); ankyrin-1 complex (ortholog); axolemma (ortholog) NW_004955536 1049325 1237943 + 102012241 AGCD01070748;AGCD01070749;AGCD01070750;AGCD01070751;GBDF01253297;XM_005410521;XM_005410522;XM_005410523;XM_013507729;XM_013507730;XM_013507731;XR_001232062 XP_005410578;XP_005410579;XP_005410580;XP_013363183;XP_013363184;XP_013363185 MODEL 9052174 protein-coding Bag1 BAG cochaperone 1 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); phosphoprotein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of motor neuron apoptotic process (ortholog); neuron differentiation (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955472 2394317 2405199 + 102015835 AGCD01053458;AGCD01053459;GBDF01006247;GBDJ01083605;XM_013522952;XM_013522953 XP_013378406;XP_013378407 MODEL 8847500 ncrna LOC102018570 uncharacterized LOC102018570 NW_004955456 15338642 15344744 + 102018570 AGCD01046668;GBDF01041403;XR_001236341;XR_001236342 MODEL 10329818 ncrna LOC106147415 uncharacterized LOC106147415 NW_004955408 11565450 11574683 - 106147415 AGCD01008312;XR_001232315 MODEL 8813303 protein-coding Chct1 CHD1 helical C-terminal domain containing 1 ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 1709938 1719278 + 102004882 AGCD01042979;AGCD01042980;GBDF01003863;XM_013519151 XP_013374605 MODEL 8991500 protein-coding LOC102009190 uncharacterized LOC102009190 NW_004955420 26585304 26590726 - 102009190 AGCD01021418;GBBH01189737;XM_013513347 XP_013368801 MODEL 9024177 protein-coding Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 INVOLVED IN inner mitochondrial membrane organization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Ataxia (ortholog); atrophic muscular disease (ortholog); cervical cancer (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955455 8472833 8474745 + 102013475 AGCD01045896;GBCQ01010321;XM_005396426 XP_005396483 MODEL 8915909 protein-coding LOC102003647 olfactory receptor 51G2-like NW_004955414 20928805 20929740 - 102003647 AGCD01015395;XM_005380487 XP_005380544 MODEL 8918901 pseudo LOC102008810 dnaJ homolog subfamily B member 6-like NW_004955403 27722644 27770774 - 102008810 AGCD01002323;AGCD01002324;AGCD01002325;AGCD01002326 MODEL 9055542 ncrna LOC102006144 uncharacterized LOC102006144 NW_004955494 945399 951856 - 102006144 AGCD01061388;GBBH01099440;XR_001231328;XR_001231329;XR_001231330 MODEL 8963310 protein-coding Dars1 aspartyl-tRNA synthetase 1 ENCODES a protein that exhibits aspartate-tRNA ligase activity (ortholog); INVOLVED IN aspartyl-tRNA aminoacylation (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955440 3268648 3345808 - 102010837 AGCD01036240;GBBH01117599;XM_013517491 XP_013372945 MODEL 8993516 pseudo LOC102012375 stathmin-2 pseudogene NW_004955568 690849 691813 + 102012375 AGCD01074525;XM_005413457 MODEL 8907454 protein-coding Actr10 actin related protein 10 INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); microtubule-based movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN dynactin complex (ortholog) NW_004955466 11948711 11969981 + 102029949 AGCD01051106;GBBH01061775;XM_005399211 XP_005399268 MODEL 8864745 pseudo LOC102007638 allograft inflammatory factor 1 pseudogene NW_004955464 13479825 13484167 - 102007638 AGCD01050284;AGCD01050285 MODEL 8758132 protein-coding LOC102009169 putative olfactory receptor 56B2 NW_004955414 21743001 21743960 + 102009169 AGCD01015431;XM_005380502 XP_005380559 MODEL 8855266 protein-coding Pnn pinin, desmosome associated protein INVOLVED IN cell-cell adhesion (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); desmosome (ortholog) NW_004955409 22102016 22110505 - 102007867 AGCD01010013;AGCD01010014;AGCD01010015;GBCB01043496;GBDI01071652;XM_013510356 XP_013365810 MODEL 8779766 protein-coding Bag2 BAG cochaperone 2 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of protein ubiquitination (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Carpenter syndrome 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic microtubule (ortholog) NW_004955502 2984233 2994457 - 102026767 AGCD01064307;AGCD01064308;GBCB01002701;XM_013505839 XP_013361293 MODEL 39131791 rrna 5S_rRNA 5S ribosomal RNA 9053374 ncrna LOC102005410 uncharacterized LOC102005410 NW_004955435 5085524 5096408 - 102005410 AGCD01032876;GBDF01087889;XR_001234879 MODEL 9042378 protein-coding Defb115 defensin beta 115 NW_004955422 29676981 29681067 + 102007030 AGCD01023407;XM_005384994 XP_005385051 MODEL 8908082 protein-coding Adora2a adenosine A2a receptor ENCODES a protein that exhibits alpha-actinin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); astrocyte activation (ortholog); eating behavior (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH amphetamine abuse (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN asymmetric synapse (ortholog); axolemma (ortholog); axon (ortholog) NW_004955455 7886720 7906214 + 102028266 AGCD01045866;GBDJ01093845;XM_005396382;XM_005396384;XM_005396385;XM_005396386;XM_013520322;XM_013520323;XM_013520324 XP_005396439;XP_005396441;XP_005396442;XP_005396443;XP_013375776;XP_013375777;XP_013375778 MODEL 8754661 protein-coding Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of mitochondrial ATP synthesis coupled electron transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955456 8260533 8265488 - 102030499 AGCD01046465;GBDI01032492;XM_005396701 XP_005396758 MODEL 8786842 protein-coding LOC102029687 uncharacterized LOC102029687 NW_004955606 323594 327516 + 102029687 AGCD01076960;XM_013510108 XP_013365562 MODEL 8842899 protein-coding Babam1 BRISC and BRCA1 A complex member 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); hematopoietic stem cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955524 939250 944457 - 102005169 AGCD01068730;GBCE01029546;XM_005409520;XM_005409521;XM_005409522;XM_005409523 XP_005409577;XP_005409578;XP_005409579;XP_005409580 MODEL 8699945 protein-coding LOC102021923 malonyl-CoA decarboxylase, mitochondrial NW_004955564 281274 328682 - 102021923 AGCD01074195;AGCD01074196;AGCD01074197;AGCD01074198;GBDI01256173;XM_005413231;XM_005413232;XM_005413233;XM_005413234;XM_005413235;XM_005413236;XM_013509208 XP_005413288;XP_005413289;XP_005413290;XP_005413291;XP_005413292;XP_005413293;XP_013364662 MODEL 9067827 protein-coding Prpsap1 phosphoribosyl pyrophosphate synthetase associated protein 1 ENCODES a protein that exhibits enzyme regulator activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN negative regulation of kinase activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) NW_004955506 5951210 5987658 + 102026134 AGCD01065394;AGCD01065395;AGCD01065396;GBDF01001593;XM_005407435 XP_005407492 MODEL 9005946 protein-coding Akap5 A-kinase anchoring protein 5 ENCODES a protein that exhibits actin binding (ortholog); adenylate cyclase binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amylase secretion (ortholog); calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); COVID-19 (ortholog); FOUND IN asymmetric synapse (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955466 5411190 5422043 - 102029603 AGCD01050879;AGCD01050880;AGCD01050881;GBDJ01123085;XM_005399128;XM_005399129 XP_005399185;XP_005399186 MODEL 8868683 protein-coding Dars2 aspartyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits aspartate-tRNA ligase activity (ortholog); aspartate-tRNA(Asn) ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial asparaginyl-tRNA aminoacylation (ortholog); tRNA aminoacylation (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); asthma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955406 13964087 13991691 + 102008592 AGCD01005956;GBCE01165299;XM_005374874 XP_005374931 MODEL 9014511 protein-coding Ruvbl1 RuvB like AAA ATPase 1 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); gene expression (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955429 15598465 15632290 + 102026554 AGCD01028810;AGCD01028811;GBDF01010843;XM_005387045 XP_005387102 MODEL 8729767 protein-coding Cenpx centromere protein X ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); replication fork processing (ortholog); resolution of meiotic recombination intermediates (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955506 1149566 1151919 + 102019188 AGCD01065247;GBDI01079507;XM_013506049;XM_013506050 XP_013361503;XP_013361504 MODEL 9002456 protein-coding Col8a1 collagen type VIII alpha 1 chain INVOLVED IN camera-type eye morphogenesis (ortholog); endodermal cell differentiation (ortholog); epithelial cell proliferation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Congenital Abnormalities (ortholog); diastolic heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN collagen type VIII trimer (ortholog) NW_004955427 1187550 1335794 + 102018203 AGCD01026868;AGCD01026869;AGCD01026870;AGCD01026871;GBDK01021566;XM_005386285;XM_005386286;XM_005386287 XP_005386342;XP_005386343;XP_005386344 MODEL 39134511 misc_rna 7SK 7SK RNA 8762735 protein-coding Lrrc18 leucine rich repeat containing 18 NW_004955556 1213871 1237281 + 102005975 AGCD01073187;AGCD01073188;AGCD01073189;AGCD01073190;GBDF01010139;XM_005412580;XM_005412581;XM_005412582;XM_005412583;XM_005412584;XM_005412586 XP_005412637;XP_005412638;XP_005412639;XP_005412640;XP_005412641;XP_005412643 MODEL 8943019 protein-coding Trpc3 transient receptor potential cation channel subfamily C member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-activated cation channel activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); positive regulation of calcium ion transport into cytosol (ortholog); positive regulation of cardiac muscle hypertrophy in response to stress (ortholog); ASSOCIATED WITH Albuminuria (ortholog); bipolar disorder (ortholog); cerebellar ataxia type 41 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955428 18628951 18678525 + 102017360 AGCD01028069;GBCB01100950;XM_005386779;XM_013515247 XP_005386836;XP_013370701 MODEL 8700081 protein-coding Cacna1c calcium voltage-gated channel subunit alpha1 C ENCODES a protein that exhibits alpha-actinin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon development (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute stress disorder (ortholog); alcohol dependence (ortholog); FOUND IN axon cytoplasm; basal pole of outer hair cell; basolateral plasma membrane NW_004955454 4573647 5199046 + 102026943 AGCD01045125;AGCD01045126;AGCD01045127;AGCD01045128;AGCD01045129;AGCD01045130;AGCD01045131;AGCD01045132;GBCE01065707;XM_005395963;XM_013520117;XM_013520118;XM_013520119;XM_013520120;XM_013520121;XM_013520122;XM_013520123;XM_013520124;XM_013520125;XM_013520126;XM_013520127;XM_013520128;XM_013520129 XP_005396020;XP_013375571;XP_013375572;XP_013375573;XP_013375574;XP_013375575;XP_013375576;XP_013375577;XP_013375578;XP_013375579;XP_013375580;XP_013375581;XP_013375582;XP_013375583 MODEL 8819659 protein-coding Wnt2 Wnt family member 2 ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN atrial cardiac muscle tissue morphogenesis (ortholog); canonical Wnt signaling pathway (ortholog); cardiac epithelial to mesenchymal transition (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH autistic disorder (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955432 22988208 23024530 - 102015880 AGCD01031272;GBCQ01174742;GBDK01118076;XM_013515906 XP_013371360 MODEL 8805546 pseudo LOC102003299 epidermal growth factor receptor substrate 15 pseudogene NW_004955449 17953369 17956566 + 102003299 AGCD01042278 MODEL 9041833 protein-coding Atp5if1 ATP synthase inhibitory factor subunit 1 ENCODES a protein that exhibits angiostatin binding (ortholog); ATPase binding (ortholog); ATPase inhibitor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); heme biosynthetic process (ortholog); mitochondrial depolarization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); mitochondrion (ortholog) NW_004955452 7372917 7375072 + 102013899 AGCD01044147;GBDF01007352;XM_005394945 XP_005395002 MODEL 39133880 misc_rna 7SK 7SK RNA 8824474 protein-coding Spaca1 sperm acrosome associated 1 INVOLVED IN acrosome assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); spermatogenic failure 85 (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog) NW_004955411 14946324 14960901 + 102030397 AGCD01011926;AGCD01011927;GBDF01043494;XM_005377737 XP_005377794 MODEL 39132529 rrna 5S_rRNA 5S ribosomal RNA 8707748 protein-coding Chd1 chromodomain helicase DNA binding protein 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); gene expression (ortholog); host-mediated activation of viral transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); castration-resistant prostate carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear chromosome (ortholog); nucleus (ortholog) NW_004955418 14200618 14268361 + 102007339 AGCD01019069;GBBH01162092;GBCQ01088613;XM_005382216 XP_005382273 MODEL 8947632 protein-coding Fmn2 formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 47 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955406 11358585 11666102 - 102018256 AGCD01005884;AGCD01005885;AGCD01005886;AGCD01005887;AGCD01005888;AGCD01005889;AGCD01005890;AGCD01005891;AGCD01005892;AGCD01005893;GBDK01276272;XM_005375457 XP_005375514 MODEL 8700144 protein-coding Ccdc198 coiled-coil domain containing 198 INVOLVED IN energy homeostasis (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955466 11331799 11369866 - 102026959 AGCD01051087;AGCD01051088;AGCD01051089;GBCQ01007372;XM_005399205;XM_005399206;XM_005399207 XP_005399262;XP_005399263;XP_005399264 MODEL 8943123 protein-coding Shb SH2 domain containing adaptor protein B ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); signaling receptor complex adaptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); blood vessel development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955419 28423354 28555948 + 102027856 AGCD01020464;AGCD01020465;GBCQ01070022;GBDJ01352611;XM_005382857 XP_005382914 MODEL 8790851 protein-coding Cdh13 cadherin 13 ENCODES a protein that exhibits adiponectin binding (ortholog); cadherin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); cellular response to toxic substance (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); arteriosclerosis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); external side of plasma membrane (ortholog) NW_004955564 407120 1549880 - 102024622 AGCD01074204;AGCD01074205;AGCD01074206;AGCD01074207;AGCD01074208;AGCD01074209;AGCD01074210;AGCD01074211;AGCD01074212;AGCD01074213;AGCD01074214;AGCD01074215;AGCD01074216;AGCD01074217;AGCD01074218;AGCD01074219;AGCD01074220;AGCD01074221;AGCD01074222;AGCD01074223;AGCD01074224;AGCD01074225;AGCD01074226;GBCB01039476;XM_005413239;XM_013509197 XP_005413296;XP_013364651 MODEL 8866370 pseudo LOC102012388 serine/threonine-protein kinase VRK1-like NW_004955402 55411512 55414352 + 102012388 AGCD01001435 MODEL 9027228 ncrna LOC102010334 uncharacterized LOC102010334 NW_004955406 19328963 19363689 - 102010334 AGCD01006077;GBDF01119607;XR_001236563;XR_001236565;XR_001236566;XR_001236567;XR_001236568;XR_001236569 MODEL 8935659 pseudo LOC102006522 60S ribosomal protein L27a pseudogene NW_004955402 43985649 43988282 - 102006522 AGCD01001085;XM_005373176 MODEL 8871171 pseudo LOC102008418 40S ribosomal protein S13 pseudogene NW_004955485 7336794 7337638 - 102008418 AGCD01058654;XM_005403816 MODEL 8838137 ncrna LOC102011155 uncharacterized LOC102011155 NW_004955446 10576607 10593188 + 102011155 AGCD01040183;GBDF01235922;XR_262391 MODEL 8886087 protein-coding Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit ENCODES a protein that exhibits DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); error-prone translesion synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); site of DNA damage (ortholog); zeta DNA polymerase complex (ortholog) NW_004955411 36068248 36246607 - 102029601 AGCD01012464;AGCD01012465;AGCD01012466;AGCD01012467;AGCD01012468;AGCD01012469;GBDK01092750;XM_005377901;XM_005377902;XM_005377904;XM_005377905;XM_013510833;XM_013510834 XP_005377958;XP_005377959;XP_005377961;XP_005377962;XP_013366287;XP_013366288 MODEL 9039818 protein-coding Ank2 ankyrin 2 ENCODES a protein that exhibits ATPase binding (ortholog); channel activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); atrial cardiac muscle cell to AV node cell communication (ortholog); atrial septum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankyrin-B-related cardiac arrhythmia (ortholog); anxiety disorder (ortholog); FOUND IN A band (ortholog); basolateral plasma membrane (ortholog); costamere (ortholog) NW_004955457 13624590 13938427 - 102015379 AGCD01047049;AGCD01047050;AGCD01047051;AGCD01047052;AGCD01047053;AGCD01047054;GBDF01193274;XM_005397083;XM_005397085;XM_013520726 XP_005397140;XP_005397142;XP_013376180 MODEL 8977832 protein-coding LOC102018571 olfactory receptor 6C6-like NW_004955458 2623103 2624062 - 102018571 AGCD01047240;XM_005397496 XP_005397553 MODEL 8865045 protein-coding Actr1a actin related protein 1A INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); spermatogenesis (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH colon cancer (ortholog); Down syndrome (ortholog); esophageal cancer (ortholog); FOUND IN cell cortex (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955485 7926744 7944648 + 102015851 AGCD01058680;GBDF01044280;XM_005403835;XM_013504044 XP_005403892;XP_013359498 MODEL 8789204 ncrna LOC102009200 uncharacterized LOC102009200 NW_004955505 3088445 3096275 + 102009200 AGCD01065015;GBDF01203512;XR_264305 MODEL 8918761 ncrna LOC102003654 uncharacterized LOC102003654 NW_004955417 11249264 11260937 - 102003654 AGCD01018126;AGCD01018127;GBBH01160626;XR_260474 MODEL 8819650 protein-coding Arhgdig Rho GDP dissociation inhibitor gamma ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); GTPase regulator activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955442 16901951 16903147 - 102015572 AGCD01037921;GBCE01013589;GBDJ01218686;XM_013517745 XP_013373199 MODEL 9003786 pseudo LOC102006151 cyclin-dependent-like kinase 5 pseudogene NW_004955503 2378754 2379747 - 102006151 AGCD01064606 MODEL 8743194 protein-coding Bsdc1 BSD domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955452 10694113 10723342 - 102021513 AGCD01044289;AGCD01044290;GBCQ01037702;XM_005395063 XP_005395120 MODEL 39131793 rrna 5S_rRNA 5S ribosomal RNA 8719921 ncrna LOC102012800 uncharacterized LOC102012800 NW_004955436 20441094 20445316 - 102012800 AGCD01034024;GBCB01036539;XR_261802 MODEL 8862066 ncrna LOC102005411 uncharacterized LOC102005411 NW_004955435 20027434 20045778 - 102005411 AGCD01033445;GBDF01117536;XR_261728 MODEL 9060687 protein-coding Thoc3 THO complex 3 INVOLVED IN mRNA export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); THO complex part of transcription export complex (ortholog) NW_004955408 28467540 28480613 - 102008381 AGCD01008713;GBDK01394321;XM_005376367 XP_005376424 MODEL 9059308 pseudo LOC102012379 60S ribosomal protein L6-like NW_004955573 953680 960330 - 102012379 AGCD01075010 MODEL 8913763 protein-coding LOC102029688 olfactory receptor 4F3/4F16/4F29-like NW_004955614 66353 67318 + 102029688 AGCD01077226;XM_005414976 XP_005415033 MODEL 8872496 protein-coding Esyt1 extended synaptotagmin 1 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid transfer activity (ortholog); INVOLVED IN intermembrane lipid transfer (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955458 3732968 3746856 + 102026723 AGCD01047340;AGCD01047341;AGCD01047342;GBCQ01033561;GBDK01346750;XM_013520965 XP_013376419 MODEL 8830870 ncrna LOC102021929 uncharacterized LOC102021929 NW_004955597 320901 337898 + 102021929 AGCD01076554;GBDF01041765;XR_001232548 MODEL 9054207 protein-coding Slc13a4 solute carrier family 13 member 4 ENCODES a protein that exhibits sodium:sulfate symporter activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955494 7013577 7057767 + 102009072 AGCD01061545;GBDJ01270862;XM_005405472;XM_013505027 XP_005405529;XP_013360481 MODEL 8855238 protein-coding Prpsap2 phosphoribosyl pyrophosphate synthetase associated protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) NW_004955467 676845 722175 - 102007531 AGCD01051231;AGCD01051232;AGCD01051233;AGCD01051234;AGCD01051235;GBDK01279678;XM_005399288;XM_013522228 XP_005399345;XP_013377682 MODEL 8884247 protein-coding Bsg basigin (Ok blood group) ENCODES a protein that exhibits protein carrier activity (ortholog); signaling receptor activity (ortholog); virus receptor activity (ortholog); INVOLVED IN decidualization (ortholog); embryo implantation (ortholog); endothelial tube morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN acrosomal membrane (ortholog); basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955495 7148806 7156296 - 102023491 AGCD01062122;GBCC01008459;XM_005406036;XM_013505312 XP_005406093;XP_013360766 MODEL 9032212 protein-coding LOC102007642 skin secretory protein xP2-like NW_004955467 8730837 8734563 + 102007642 AGCD01051466;AGCD01051467;GBDF01044983;XM_005399752 XP_005399809 MODEL 8972251 protein-coding Akap6 A-kinase anchoring protein 6 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN action potential (ortholog); cAMP/PKA signal transduction (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH anorexia nervosa (ortholog); atrial fibrillation (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN calcium channel complex (ortholog); caveola (ortholog); cytoplasm (ortholog) NW_004955409 28067814 28516881 - 102008602 AGCD01010226;AGCD01010227;AGCD01010228;AGCD01010229;AGCD01010230;AGCD01010231;AGCD01010232;AGCD01010233;AGCD01010234;AGCD01010235;AGCD01010236;GBCB01023293;XM_005376946;XM_013510378 XP_005377003;XP_013365832 MODEL 8907004 pseudo LOC102009179 60S ribosomal protein L23a pseudogene NW_004955418 372775 373635 - 102009179 AGCD01018673 MODEL 8863087 protein-coding Daw1 dynein assembly factor with WD repeats 1 INVOLVED IN cerebrospinal fluid circulation (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog) NW_004955453 6736998 6788214 - 102005887 AGCD01044729;AGCD01044730;AGCD01044731;GBDF01045707;XM_005395436;XM_005395438;XM_013519986 XP_005395493;XP_005395495;XP_013375440 MODEL 8940560 protein-coding Col8a2 collagen type VIII alpha 2 chain INVOLVED IN camera-type eye morphogenesis (ortholog); epithelial cell proliferation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Corneal Dystrophy, Fuchs' Endothelial, 1 (ortholog); Fuchs' endothelial dystrophy (ortholog); genetic disease (ortholog) NW_004955452 14127654 14149582 - 102026826 AGCD01044452;GBCE01000327;XM_005395170 XP_005395227 MODEL 8779551 protein-coding Pno1 partner of NOB1 homolog INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955424 16697109 16705963 - 102023494 AGCD01024748;GBDI01227497;XM_005385673 XP_005385730 MODEL 9039941 protein-coding LOC102018572 uncharacterized protein C2orf78-like NW_004955409 22962231 22969880 + 102018572 AGCD01010049;GBDF01047261;XM_005376894;XM_013510259;XR_001232609 XP_005376951;XP_013365713 MODEL 8947428 protein-coding LOC102007648 olfactory receptor 52B6 NW_004955414 21480839 21485708 + 102007648 AGCD01015421;XM_005380092 XP_005380149 MODEL 8747352 protein-coding Cacna1d calcium voltage-gated channel subunit alpha1 D ENCODES a protein that exhibits alpha-actinin binding (ortholog); ankyrin binding (ortholog); calcium channel activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; insulin secretion pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoma (ortholog); Alcohol Withdrawal Seizures (ortholog); FOUND IN basolateral plasma membrane; dendrite; neuron projection terminus NW_004955430 3450151 3796983 + 102030453 AGCD01029217;AGCD01029218;AGCD01029219;AGCD01029220;AGCD01029221;AGCD01029222;AGCD01029223;GBCE01065714;XM_005387368;XM_005387369;XM_005387371;XM_005387372;XM_005387373;XM_013515605;XM_013515606;XM_013515607;XM_013515608;XM_013515609 XP_005387425;XP_005387426;XP_005387428;XP_005387429;XP_005387430;XP_013371059;XP_013371060;XP_013371061;XP_013371062;XP_013371063 MODEL 8931988 protein-coding Bag3 BAG cochaperone 3 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); protein-containing complex binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to unfolded protein (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); atrial fibrillation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955551 446322 468329 + 102011814 AGCD01072656;AGCD01072657;GBBH01114721;XM_005412164;XM_013508589;XM_013508590 XP_005412221;XP_013364043;XP_013364044 MODEL 8936827 protein-coding LOC102005069 glycine N-acyltransferase-like protein Keg1 NW_004955511 3599452 3633026 - 102005069 AGCD01066468;AGCD01066469;GBCQ01010946;XM_005408044;XM_005408045;XM_005408046 XP_005408101;XP_005408102;XP_005408103 MODEL 10071277 ncrna LOC106147416 uncharacterized LOC106147416 NW_004955408 11683044 11687252 + 106147416 AGCD01008314;XR_001232317 MODEL 8717272 protein-coding Adora2b adenosine A2b receptor ENCODES a protein that exhibits G protein-coupled adenosine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled adenosine receptor signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); esophageal cancer (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955467 1342271 1363149 + 102011637 AGCD01051262;GBDJ01175337;XM_005399305 XP_005399362 MODEL 8763602 pseudo LOC102010338 uncharacterized protein C3orf38 homolog pseudogene NW_004955456 8222073 8223194 - 102010338 AGCD01046462 MODEL 8877786 protein-coding Thoc5 THO complex subunit 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); cell morphogenesis (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH anemia (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955455 3761933 3795517 - 102008060 AGCD01045650;AGCD01045651;GBCB01056026;XM_005396212;XM_013520426 XP_005396269;XP_013375880 MODEL 8956205 protein-coding Ruvbl2 RuvB like AAA ATPase 2 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to UV (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955559 1657241 1674272 - 102026269 AGCD01073658;AGCD01073659;GBDF01009024;XM_005412916 XP_005412973 MODEL 8997650 protein-coding Cep104 centrosomal protein 104 ENCODES a protein that exhibits glutamate binding (ortholog); glycine binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 77 (ortholog); FOUND IN centriole (ortholog); cilium (ortholog) NW_004955486 7849921 7877598 + 102024237 AGCD01059138;AGCD01059139;GBDF01120028;XM_005404138;XM_005404139;XM_013504197 XP_005404195;XP_005404196;XP_013359651 MODEL 8837222 protein-coding Lrrc19 leucine rich repeat containing 19 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN host-mediated modulation of intestinal microbiota composition (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN plasma membrane (ortholog) NW_004955472 7841459 7850906 + 102026967 AGCD01053632;GBCQ01066517;XM_005401155 XP_005401212 MODEL 39133881 misc_rna 7SK 7SK RNA 39132538 rrna 5S_rRNA 5S ribosomal RNA 39131556 protein-coding DEFB116 defensin beta 116 8849921 protein-coding Ing1 inhibitor of growth family member 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein import into nucleus (ortholog); regulation of programmed cell death (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955404 1998665 1999615 - 102012052 AGCD01003243;GBDF01087133;GBDI01222670;XM_013515751 XP_013371205 MODEL 8730016 protein-coding Spaca3 sperm acrosome associated 3 ENCODES a protein that exhibits lysozyme activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); ASSOCIATED WITH melanoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal membrane (ortholog); acrosomal vesicle (ortholog) NW_004955481 7832518 7840130 + 102028859 AGCD01057078;GBDF01008490;XM_005402831;XM_005402832;XM_005402833 XP_005402888;XP_005402889;XP_005402890 MODEL 8868600 ncrna LOC102006153 uncharacterized LOC102006153 NW_004955511 3567813 3569808 - 102006153 AGCD01066468;GBDF01146056;XR_264424 MODEL 8997029 pseudo LOC102004350 protein artemis pseudogene NW_004955406 36605973 36608435 + 102004350 AGCD01006559 MODEL 39131794 rrna 5S_rRNA 5S ribosomal RNA 8971258 protein-coding Col9a1 collagen type IX alpha 1 chain ENCODES a protein that exhibits carbohydrate binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cartilage development (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); aortic valve disease 2 (ortholog); aortic valve stenosis (ortholog); FOUND IN collagen type IX trimer (ortholog) NW_004955488 5296895 5384940 - 102025692 AGCD01059618;AGCD01059619;GBDI01105833;XM_005404469;XM_005404470;XM_013504448;XM_013504449 XP_005404526;XP_005404527;XP_013359902;XP_013359903 MODEL 8975972 pseudo LOC102005070 olfactory receptor 5D18-like NW_004955511 636613 637572 + 102005070 AGCD01066336 MODEL 9064526 protein-coding Ccdc22 CCC complex scaffolding subunit CCDC22 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane transport (ortholog); intracellular copper ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); protein-containing complex (ortholog) NW_004955543 719185 731788 + 102014493 AGCD01071599;GBCQ01100165;XM_005411347 XP_005411404 MODEL 8725467 protein-coding LOC102012389 PRAME family member 6-like NW_004955618 32981 36268 - 102012389 AGCD01077283;AGCD01077284;XM_013510147 XP_013365601 MODEL 8748986 protein-coding Cacna1e calcium voltage-gated channel subunit alpha1 E ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); voltage-gated monoatomic cation channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); arthrogryposis multiplex congenita (ortholog); autistic disorder (ortholog); FOUND IN neuronal cell body; GABA-ergic synapse (ortholog); perikaryon (ortholog) NW_004955406 20356564 20824679 + 102014412 AGCD01006105;AGCD01006106;AGCD01006107;AGCD01006108;GBDF01106809;XM_005374993;XM_013521375;XM_013521381;XM_013521387;XM_013521398;XM_013521405;XM_013521412 XP_005375050;XP_013376829;XP_013376835;XP_013376841;XP_013376852;XP_013376859;XP_013376866 MODEL 8846327 protein-coding LOC102006523 uncharacterized LOC102006523 NW_004955602 502456 576189 - 102006523 AGCD01076789;AGCD01076790;AGCD01076791;AGCD01076792;AGCD01076793;AGCD01076794;AGCD01076795;AGCD01076796;AGCD01076797;AGCD01076798;AGCD01076799;XM_013510077 XP_013365531 MODEL 8723359 pseudo LOC102011156 glutathione S-transferase alpha-3 pseudogene NW_004955446 4760282 4767429 + 102011156 AGCD01040045 MODEL 8842062 ncrna LOC102003300 uncharacterized LOC102003300 NW_004955588 694209 720110 + 102003300 AGCD01076118;AGCD01076119;GBDF01073805;XR_001232529;XR_265119 MODEL 8917623 protein-coding Trpc4 transient receptor potential cation channel subfamily C member 4 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); calcium channel complex (ortholog); cation channel complex (ortholog) NW_004955431 8283585 8479524 + 102020596 AGCD01030124;AGCD01030125;AGCD01030126;GBDJ01262104;XM_005387650;XM_005387651;XM_013515720 XP_005387707;XP_005387708;XP_013371174 MODEL 8903285 protein-coding Atp5mc1 ATP synthase membrane subunit c locus 1 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); proton channel activity (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); cold acclimation (ortholog); negative regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cation channel complex (ortholog); distal axon (ortholog); mitochondrion (ortholog) NW_004955451 12426309 12429460 - 102029813 AGCD01043393;AGCD01043394;GBCE01002341;XM_005394227;XM_005394228 XP_005394284;XP_005394285 MODEL 8892998 ncrna LOC102009202 uncharacterized LOC102009202 NW_004955508 2070981 2129438 - 102009202 AGCD01065779;AGCD01065780;AGCD01065781;AGCD01065782;GBDF01234233;XR_001231648;XR_001231649;XR_001231650;XR_001231651;XR_001231652;XR_264387 MODEL 8772149 protein-coding LOC102003656 zinc finger protein 878-like NW_004955483 540140 571870 + 102003656 AGCD01057622;AGCD01057623;GBDF01054439;XM_013503796;XM_013503797 XP_013359250;XP_013359251 MODEL 8780852 protein-coding Chd1l chromodomain helicase DNA binding protein 1 like ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); histone reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH Alport syndrome (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955568 1132594 1189176 - 102015060 AGCD01074541;AGCD01074542;AGCD01074543;GBDF01157291;XM_005413466;XM_005413468 XP_005413523;XP_005413525 MODEL 8809041 protein-coding Thoc6 THO complex subunit 6 INVOLVED IN central nervous system development (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH Beaulieu-Boycott-Innes Syndrome (ortholog); cryptorchidism (ortholog); Developmental Disabilities (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955442 14314100 14317726 - 102007059 AGCD01037810;GBDK01189523;XM_005391375;XM_005391377 XP_005391432;XP_005391434 MODEL 8923889 protein-coding Babam2 BRISC and BRCA1 A complex member 2 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); tumor necrosis factor receptor binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955469 9831488 10246631 + 102009707 AGCD01052517;AGCD01052518;AGCD01052519;AGCD01052520;AGCD01052521;AGCD01052522;AGCD01052523;AGCD01052524;AGCD01052525;AGCD01052526;AGCD01052527;AGCD01052528;AGCD01052529;GBCQ01036978;XM_005400518;XM_005400519;XM_013522605;XR_263443 XP_005400575;XP_005400576;XP_013378059 MODEL 8824773 protein-coding Ank3 ankyrin 3 ENCODES a protein that exhibits cadherin binding (ortholog); channel activator activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); axon development (ortholog); axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-related birth defects (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); basal plasma membrane (ortholog) NW_004955425 13522233 13851286 - 102015129 AGCD01025538;AGCD01025539;AGCD01025540;AGCD01025541;AGCD01025542;AGCD01025543;AGCD01025544;GBDJ01224829;XM_013514807;XM_013514808;XM_013514809;XM_013514810;XM_013514811;XM_013514812;XM_013514813;XM_013514814;XM_013514815;XM_013514816;XM_013514817;XM_013514818;XM_013514819;XM_013514820;XM_013514821;XM_013514822;XM_013514823;XM_013514824;XM_013514825 XP_013370261;XP_013370262;XP_013370263;XP_013370264;XP_013370265;XP_013370266;XP_013370267;XP_013370268;XP_013370269;XP_013370270;XP_013370271;XP_013370272;XP_013370273;XP_013370274;XP_013370275;XP_013370276;XP_013370277;XP_013370278;XP_013370279 MODEL 8860439 protein-coding Fmnl1 formin like 1 ENCODES a protein that exhibits actin filament binding (ortholog); GTPase activating protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin filament severing (ortholog); substrate-dependent cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); phagocytic vesicle (ortholog); plasma membrane (ortholog) NW_004955451 17876017 17893683 + 102026066 AGCD01043780;AGCD01043781;GBDI01002143;GBDJ01389975;XM_013519160 XP_013374614 MODEL 8988157 protein-coding Arhgef1 Rho guanine nucleotide exchange factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN microtubule depolymerization (ortholog); Rho-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955555 941539 961407 - 102006167 AGCD01073054;GBCB01059864;XM_005412406;XM_005412407;XM_005412409;XM_013508714;XM_013508715;XM_013508716;XM_013508717 XP_005412463;XP_005412464;XP_005412466;XP_013364168;XP_013364169;XP_013364170;XP_013364171 MODEL 8884892 pseudo LOC102018574 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like NW_004955409 28949729 28974461 - 102018574 AGCD01010248;AGCD01010249 MODEL 8837515 ncrna LOC102012801 uncharacterized LOC102012801 NW_004955437 8031121 8040440 - 102012801 AGCD01034477;GBDF01226069;XR_261867 MODEL 8747346 protein-coding LOC102029689 olfactory receptor 2T3-like NW_004955630 127927 135581 - 102029689 AGCD01077523;XM_013510166 XP_013365620 MODEL 8900526 protein-coding Cdh15 cadherin 15 ASSOCIATED WITH autosomal dominant intellectual developmental disorder 1 (ortholog); autosomal dominant intellectual developmental disorder 3 (ortholog); epilepsy (ortholog); FOUND IN caveola (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) NW_004955541 2881374 2893885 + 102027788 AGCD01071429;AGCD01071430;GBCB01109170;GBCQ01072076;XM_013507987 XP_013363441 MODEL 8793024 protein-coding Defb116 defensin beta 116 NW_004955422 29569787 29613939 + 102006679 AGCD01023402;AGCD01023403;XM_005384993 XP_005385050 MODEL 8863916 ncrna LOC102008419 uncharacterized LOC102008419 NW_004955420 12338859 12346661 + 102008419 AGCD01020861;GBDF01156176;XR_001233788;XR_001233789;XR_260709 MODEL 8918593 ncrna LOC102021930 uncharacterized LOC102021930 NW_004955403 4854568 4862986 + 102021930 AGCD01001799;GBDF01251789;XR_259151 MODEL 10377262 pseudo LOC106147417 endogenous retrovirus group K member 25 Pol protein-like NW_004955557 185832 187652 - 106147417 AGCD01073230 MODEL 8832082 protein-coding Wnt2b Wnt family member 2B INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to starvation (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Diarrhea 9 (ortholog); endodermal sinus tumor (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955435 15948262 15962958 + 102003274 AGCD01033291;GBDF01056432;XM_005388958;XM_013516420 XP_005389015;XP_013371874 MODEL 8781238 protein-coding LOC102009182 zinc finger protein 709-like NW_004955483 60152 101435 + 102009182 AGCD01057595;AGCD01057596;AGCD01057597;AGCD01057598;XM_005403269;XM_013503758 XP_005403326;XP_013359212 MODEL 8787773 ncrna LOC102010339 uncharacterized LOC102010339 NW_004955408 5326384 5328418 + 102010339 AGCD01008132;GBDF01177225;XR_259661 MODEL 8800706 protein-coding Prr11 proline rich 11 INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 3813617 3839521 - 102016335 AGCD01043074;AGCD01043075;GBDJ01400550;XM_005393991;XM_013519224;XM_013519225 XP_005394048;XP_013374678;XP_013374679 MODEL 8789063 protein-coding Daxx death domain associated protein ENCODES a protein that exhibits ATP-dependent H3-H4 histone complex chaperone activity (ortholog); enzyme binding (ortholog); histone binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); apoptotic signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN aldosterone signaling pathway; histone modification pathway; p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); appendiceal neoplasm (ortholog); FOUND IN cell body (ortholog); cell cortex (ortholog); chromosome, centromeric region (ortholog) NW_004955437 1869692 1874041 - 102003905 AGCD01034241;GBDF01047879;XM_013516888 XP_013372342 MODEL 8972996 protein-coding Bsn bassoon presynaptic cytomatrix protein ENCODES a protein that exhibits dynein light chain binding (ortholog); enzyme inhibitor activity (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN axo-dendritic transport (ortholog); modulation of chemical synaptic transmission (ortholog); presynaptic active zone assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); axon cytoplasm (ortholog); cell cortex (ortholog) NW_004955532 1527336 1578394 + 102008256 AGCD01070191;AGCD01070192;AGCD01070193;AGCD01070194;GBDF01249114;XM_013507574 XP_013363028 MODEL 8737570 protein-coding LOC102011157 olfactory receptor 2B11-like NW_004955576 1315227 1322081 + 102011157 AGCD01075372;XM_005413952 XP_005414009 MODEL 8786793 protein-coding Actr1b actin related protein 1B ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Duane retraction syndrome (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955470 4328895 4336441 - 102026312 AGCD01052729;GBCB01006391;XM_005400694;XM_013522835;XM_013522837 XP_005400751;XP_013378289;XP_013378291 MODEL 8758096 protein-coding Chchd3 coiled-coil-helix-coiled-coil-helix domain containing 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN cristae formation (ortholog); inner mitochondrial membrane organization (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); MICOS complex (ortholog); mitochondrial inner membrane (ortholog) NW_004955410 34818660 35093398 + 102006105 AGCD01011405;AGCD01011406;AGCD01011407;AGCD01011408;AGCD01011409;GBDJ01138148;XM_005377542;XM_013510637 XP_005377599;XP_013366091 MODEL 8869605 protein-coding Pnoc prepronociceptin ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to ethanol (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH Acute Alcohol Sensitivity (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN synaptic membrane (ortholog) NW_004955403 50735567 50755892 + 102012392 AGCD01002969;GBDF01284017;XM_005373768;XM_005373769;XM_005373770 XP_005373825;XP_005373826;XP_005373827 MODEL 8845481 ncrna LOC102003659 uncharacterized LOC102003659 NW_004955420 14434101 14442240 + 102003659 AGCD01020946;GBDF01020272;XR_260715;XR_260716 MODEL 39134446 misc_rna 7SK 7SK RNA 8987193 protein-coding Bag4 BAG cochaperone 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); negative regulation of mRNA modification (ortholog); PARTICIPATES IN ceramide signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); high grade glioma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955463 13788852 13824135 + 102021535 AGCD01049886;AGCD01049887;AGCD01049888;AGCD01049889;AGCD01049890;GBDF01161731;XM_005398437 XP_005398494 MODEL 9007772 protein-coding Rex1bd required for excision 1-B domain containing ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955524 3003820 3005677 - 102009210 AGCD01068848;GBCE01001434;GBDJ01073176;XM_013507290 XP_013362744 MODEL 8866243 pseudo LOC102006157 spermatogenesis-associated protein 2 pseudogene NW_004955433 1909956 1910500 - 102006157 AGCD01031373 MODEL 9006095 protein-coding Esyt2 extended synaptotagmin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); INVOLVED IN fibroblast migration (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955579 971556 1052575 - 102006404 AGCD01075561;AGCD01075562;AGCD01075563;AGCD01075564;GBDJ01073043;XM_013509669 XP_013365123 MODEL 8906359 protein-coding Bacc1 BPTF associated chromatin complex component 1 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN MLL1 complex (ortholog); NURF complex (ortholog) NW_004955467 9911925 9914811 - 102008931 AGCD01051535;GBDJ01083783;XM_013522103;XM_013522104;XM_013522105;XM_013522106;XM_013522107;XM_013522108;XM_013522109 XP_013377557;XP_013377558;XP_013377559;XP_013377560;XP_013377561;XP_013377562;XP_013377563 MODEL 9029802 protein-coding Slc13a5 solute carrier family 13 member 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); identical protein binding (ortholog); organic acid:sodium symporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); cellular response to lithium ion (ortholog); citrate transport (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); colon adenocarcinoma (ortholog); developmental and epileptic encephalopathy 25 (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955467 12181555 12217280 - 102007978 AGCD01051625;GBDF01196108;XM_005399670;XM_013522142;XM_013522144 XP_005399727;XP_013377596;XP_013377598 MODEL 8804376 protein-coding Akap7 A-kinase anchoring protein 7 ENCODES a protein that exhibits AMP binding (ortholog); protein domain specific binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN action potential (ortholog); cAMP/PKA signal transduction (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955436 11883840 12002668 + 102017601 AGCD01033822;AGCD01033823;AGCD01033824;GBBH01106984;GBCE01089361;XM_013516678 XP_013372132 MODEL 39133882 misc_rna 7SK 7SK RNA 8737908 pseudo LOC102003301 60S ribosomal protein L9 pseudogene NW_004955402 38686017 38686662 + 102003301 AGCD01000966 MODEL 10323061 pseudo LOC106147418 round spermatid basic protein 1-like protein NW_004955557 2266647 2271525 + 106147418 AGCD01073328;AGCD01073329 MODEL 8740844 protein-coding Shbg sex hormone binding globulin INVOLVED IN primary spermatocyte growth (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); diabetes mellitus (ortholog); dilated cardiomyopathy (ortholog) NW_004955467 9301173 9305010 - 102006891 AGCD01051493;AGCD01051494;GBCQ01035544;XM_005399468;XM_005399469;XM_005399470;XM_013522146 XP_005399525;XP_005399526;XP_005399527;XP_013377600 MODEL 8702202 protein-coding Cep112 centrosomal protein 112 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN gene expression (ortholog); receptor localization to synapse (ortholog); regulation of translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955478 5065925 5583624 - 102005929 AGCD01055864;AGCD01055865;AGCD01055866;AGCD01055867;AGCD01055868;AGCD01055869;AGCD01055870;AGCD01055871;AGCD01055872;AGCD01055873;AGCD01055874;AGCD01055875;AGCD01055876;AGCD01055877;AGCD01055878;AGCD01055879;GBDK01264291;XM_005402139;XM_005402140;XM_005402141;XM_005402146;XM_013503230;XM_013503231 XP_005402196;XP_005402197;XP_005402198;XP_005402203;XP_013358684;XP_013358685 MODEL 8832907 ncrna LOC102009203 uncharacterized LOC102009203 NW_004955429 19713878 19748003 - 102009203 AGCD01028967;AGCD01028968;GBDK01115535;XR_001234525;XR_261366;XR_261367 MODEL 8928448 protein-coding LOC102005416 complement C4-A NW_004955437 492806 505554 + 102005416 AGCD01034137;AGCD01034138;GBCE01002333;XM_013516778 XP_013372232 MODEL 8897402 protein-coding Chd2 chromodomain helicase DNA binding protein 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); histone binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); hematopoietic stem cell differentiation (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); anxiety disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955416 21085570 21210321 + 102019061 AGCD01017496;AGCD01017497;AGCD01017498;GBDI01182725;XM_005381599 XP_005381656 MODEL 8990779 protein-coding Spaca4 sperm acrosome associated 4 INVOLVED IN binding of sperm to zona pellucida (ortholog); fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog); inner acrosomal membrane (ortholog); outer acrosomal membrane (ortholog) NW_004955559 1937747 1938789 - 102008901 AGCD01073682;GBDF01009196;XM_005412948 XP_005413005 MODEL 9031883 protein-coding Fmnl2 formin like 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955440 17925982 18077176 + 102019643 AGCD01036589;AGCD01036590;AGCD01036591;AGCD01036592;AGCD01036593;AGCD01036594;AGCD01036595;GBBH01197804;XM_013517443 XP_013372897 MODEL 8701712 protein-coding LOC102012802 uncharacterized LOC102012802 NW_004955541 36527 43417 + 102012802 AGCD01071344;GBDI01026247;XM_005410957;XM_013507937;XM_013507938 XP_005411014;XP_013363391;XP_013363392 MODEL 8957846 protein-coding LOC102006524 PRAME family member 9/15-like NW_004955608 205572 208767 - 102006524 AGCD01077013;AGCD01077014;GBDF01281184;XM_013510116 XP_013365570 MODEL 8926496 protein-coding Defb118 defensin beta 118 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); membrane destabilizing activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH stomach cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 29554310 29560660 - 102024353 AGCD01023402;GBDF01056234;XM_005384922 XP_005384979 MODEL 8750727 protein-coding LOC102021933 protein asunder homolog NW_004956483 1036 3435 + 102021933 AGCD01079671;GBCC01016012;XM_013510229 XP_013365683 MODEL 8858528 ncrna LOC102008426 uncharacterized LOC102008426 NW_004955493 5730211 5734272 - 102008426 AGCD01061075;GBCQ01114580;XR_001231278;XR_264085 MODEL 9032743 protein-coding Rwdd1 RWD domain containing 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955526 94518 120421 - 102027449 AGCD01069210;AGCD01069211;AGCD01069212;GBDJ01131321;XM_005409748 XP_005409805 MODEL 8890431 protein-coding Cacna1f calcium voltage-gated channel subunit alpha1 F ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN axonogenesis (ortholog); dendrite morphogenesis (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH achromatopsia (ortholog); Aland Island eye disease (ortholog); amblyopia (ortholog); FOUND IN membrane (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) NW_004955543 692035 717364 - 102009879 AGCD01071599;GBDK01363496;XM_013508152 XP_013363606 MODEL 8755165 protein-coding Lrrc2 leucine rich repeat containing 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955420 25492277 25528530 + 102024805 AGCD01021363;AGCD01021364;AGCD01021365;GBDF01266882;GBDJ01107392;XM_013513588 XP_013369042 MODEL 9010871 pseudo LOC102007650 zinc finger and BTB domain-containing protein 14-like NW_004955470 12771610 12776657 - 102007650 AGCD01052939;AGCD01052940 MODEL 8994964 ncrna LOC102010340 uncharacterized LOC102010340 NW_004955457 12942492 12966671 + 102010340 AGCD01047033;GBBH01124502;XR_262946 MODEL 39132539 rrna 5S_rRNA 5S ribosomal RNA 8789974 protein-coding Trpc4ap transient receptor potential cation channel subfamily C member 4 associated protein ENCODES a protein that exhibits phosphatase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN hair follicle maturation (ortholog); protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog) NW_004955422 26301937 26383464 + 102016719 AGCD01023284;AGCD01023285;AGCD01023286;AGCD01023287;AGCD01023288;GBDF01005507;XM_005384808;XM_005384809 XP_005384865;XP_005384866 MODEL 8748231 ncrna LOC102011163 uncharacterized LOC102011163 NW_004955450 15153068 15157236 - 102011163 AGCD01042782;GBCB01071256;XR_001235830;XR_001235831 MODEL 39131795 rrna 5S_rRNA 5S ribosomal RNA 8827587 protein-coding Atp5mc2 ATP synthase membrane subunit c locus 2 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); INVOLVED IN pore complex assembly (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); response to ethanol (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cation channel complex (ortholog); mitochondrion (ortholog) NW_004955458 952817 960963 - 102024430 AGCD01047160;GBDJ01017247;XM_005397191;XM_005397192 XP_005397248;XP_005397249 MODEL 8964967 protein-coding Thoc7 THO complex subunit 7 INVOLVED IN mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955517 2037406 2046694 + 102020368 AGCD01067614;AGCD01067615;GBDF01082152;GBDI01068250;XM_013506938 XP_013362392 MODEL 8749563 protein-coding Dazl deleted in azoospermia like ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR binding (ortholog); translation activator activity (ortholog); INVOLVED IN female meiosis II (ortholog); germ cell development (ortholog); oocyte maturation (ortholog); ASSOCIATED WITH azoospermia (ortholog); stomach cancer (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955430 8869419 8880782 - 102005622 AGCD01029396;GBDF01043369;XM_013515564 XP_013371018 MODEL 8924439 pseudo LOC102005074 ferritin heavy chain-like NW_004955515 5069307 5090074 - 102005074 AGCD01067337 MODEL 8880421 protein-coding Ankar ankyrin and armadillo repeat containing ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955403 9132988 9174959 - 102006088 AGCD01001901;GBDF01126831;XM_005373315;XM_005373316;XM_013512359;XM_013512361;XR_001233247 XP_005373372;XP_005373373;XP_013367813;XP_013367815 MODEL 8952184 ncrna LOC102012393 uncharacterized LOC102012393 NW_004955403 55119286 55129586 - 102012393 AGCD01003110;GBDF01159103;XR_001234447;XR_259276 MODEL 8935291 protein-coding Ccdc24 coiled-coil domain containing 24 ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955537 3516502 3520559 + 102012025 AGCD01070960;GBDJ01061341;XM_005410706;XM_013507780;XM_013507781;XR_001232081 XP_005410763;XP_013363234;XP_013363235 MODEL 8920155 protein-coding LOC102029702 complement factor H-related protein 3-like NW_004955406 33597625 33619541 - 102029702 AGCD01006483;XM_013503252 XP_013358706 MODEL 8904259 protein-coding Ccdc3 coiled-coil domain containing 3 INVOLVED IN blood vessel development (ortholog); calcium ion homeostasis (ortholog); cholesterol metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955462 909300 1013927 - 102024317 AGCD01049092;AGCD01049093;AGCD01049094;AGCD01049095;AGCD01049096;GBBH01002230;XM_013521472 XP_013376926 MODEL 8899332 protein-coding Thop1 thimet oligopeptidase 1 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); peptidase activity (ortholog); peptide binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); peptide catabolic process (ortholog); peptide metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955495 5055389 5070710 + 102019711 AGCD01061973;GBDF01128633;XM_005405835 XP_005405892 MODEL 8820400 protein-coding Bag5 BAG cochaperone 5 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-folding chaperone binding (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN Golgi organization (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); dilated cardiomyopathy 2F (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); inclusion body (ortholog); junctional membrane complex (ortholog) NW_004955538 2412297 2416094 - 102011586 AGCD01071124;AGCD01071125;GBDI01065509;XM_005410783;XM_005410784;XM_005410785;XM_005410786 XP_005410840;XP_005410841;XP_005410842;XP_005410843 MODEL 8836279 protein-coding Spaca5 sperm acrosome associated 5 NW_004955516 103674 106082 - 102012568 AGCD01067369;GBDF01189240;XM_005408932 XP_005408989 MODEL 9020056 protein-coding Esyt3 extended synaptotagmin 3 INVOLVED IN fibroblast migration (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955501 537195 585640 - 102016293 AGCD01064032;AGCD01064033;AGCD01064034;GBDJ01208218;GBDK01433210;XM_005406863 XP_005406920 MODEL 8822158 protein-coding Bsnd barttin CLCNK type accessory subunit beta ENCODES a protein that exhibits chloride channel activity (ortholog); chloride channel regulator activity (ortholog); INVOLVED IN chloride transport (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness (ortholog); Bartter disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955464 4459686 4468749 - 102023448 AGCD01049991;GBCQ01002696;XM_013521764 XP_013377218 MODEL 8974702 protein-coding Akap8 A-kinase anchoring protein 8 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cell cycle G2/M phase transition (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to prostaglandin E stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN condensed chromosome (ortholog); cytoplasm (ortholog); female pronucleus (ortholog) NW_004955495 7874655 7893209 + 102008956 AGCD01062170;GBDF01160004;XM_005406082;XM_005406083 XP_005406139;XP_005406140 MODEL 8751024 protein-coding Ing2 inhibitor of growth family member 2 ENCODES a protein that exhibits DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); male germ-line stem cell asymmetric division (ortholog); male meiosis I (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 25325600 25331175 - 102009672 AGCD01002286;AGCD01002287;GBDF01188823;XM_005373503 XP_005373560 MODEL 39133883 misc_rna 7SK 7SK RNA 9032812 pseudo LOC102003302 COMM domain-containing protein 10-like NW_004955602 139591 140263 + 102003302 AGCD01076763 MODEL 8882146 protein-coding LOC102018575 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 9790084 9814789 - 102018575 AGCD01048552;AGCD01048553;AGCD01048554;AGCD01048555;GBBH01072462;GBDJ01273101;XM_013521140 XP_013376594 MODEL 8997702 protein-coding Pnp purine nucleoside phosphorylase ENCODES a protein that exhibits guanosine phosphorylase activity (ortholog); identical protein binding (ortholog); nucleoside binding (ortholog); INVOLVED IN allantoin metabolic process (ortholog); dAMP catabolic process (ortholog); deoxyadenosine catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955550 1290816 1299553 + 102026162 AGCD01072560;GBCE01002066;XM_005412065 XP_005412122 MODEL 8837733 protein-coding Col9a2 collagen type IX alpha 2 chain ENCODES a protein that exhibits protein homodimerization activity (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN collagen type IX trimer (ortholog) NW_004955537 139481 152866 - 102024610 AGCD01070853;GBCE01154173;XM_005410553 XP_005410610 MODEL 8973871 protein-coding Actr2 actin related protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal protein binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); associative learning (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cap (ortholog); Arp2/3 protein complex (ortholog); cell cortex (ortholog) NW_004955424 19293949 19333170 - 102003465 AGCD01024814;AGCD01024815;GBDK01029184;XM_005385690;XM_005385691 XP_005385747;XP_005385748 MODEL 39134447 misc_rna 7SK 7SK RNA 8897813 protein-coding LOC102003660 cytochrome P450 2J2-like NW_004955420 23534311 23545670 + 102003660 AGCD01021248;GBDJ01218648;XM_013513341 XP_013368795 MODEL 8802581 protein-coding Cstpp1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); regulation of protein complex stability (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN centriolar satellite (ortholog) NW_004955422 1005941 1179128 - 102029188 AGCD01022444;AGCD01022445;AGCD01022446;AGCD01022447;GBDJ01371432;XM_005384000;XM_005384001;XM_013513931;XM_013513932;XM_013513933;XM_013513934 XP_005384057;XP_005384058;XP_013369385;XP_013369386;XP_013369387;XP_013369388 MODEL 8766947 protein-coding LOC102012401 myotubularin-related protein 3-like NW_004955455 4250135 4256614 - 102012401 AGCD01045673;GBDK01132871;XM_005396226;XM_005396227 XP_005396283;XP_005396284 MODEL 8967078 protein-coding Rexo1 RNA exonuclease 1 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955495 6194380 6219907 + 102025594 AGCD01062056;AGCD01062057;GBDF01010614;XM_005405946 XP_005406003 MODEL 8923639 protein-coding LOC102021936 Ig-like V-type domain-containing protein FAM187A NW_004955451 17693409 17695551 + 102021936 AGCD01043767;GBCE01037287;XM_005394557 XP_005394614 MODEL 8802733 protein-coding Fmnl3 formin like 3 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell migration (ortholog); filopodium assembly (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955547 253149 311157 - 102005513 AGCD01072141;AGCD01072142;AGCD01072143;GBCB01007830;XM_005411841;XM_005411842;XM_005411843;XM_005411844;XM_013508461;XM_013508462 XP_005411898;XP_005411899;XP_005411900;XP_005411901;XP_013363915;XP_013363916 MODEL 8819123 protein-coding Adpgk ADP dependent glucokinase ENCODES a protein that exhibits ADP-specific glucokinase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955450 4593295 4625091 + 102026275 AGCD01042469;AGCD01042470;GBDI01256553;XM_005393601;XM_005393602 XP_005393658;XP_005393659 MODEL 8908683 protein-coding Sytl5 synaptotagmin like 5 INVOLVED IN exocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955601 76647 210198 + 102026928 AGCD01076746;AGCD01076747;GBDI01057595;XM_005414815 XP_005414872 MODEL 8869252 protein-coding Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cellular response to oxidative stress (ortholog); mitochondrial DNA repair (ortholog); PARTICIPATES IN intermembrane space assembly pathway of mitochondrial protein import; ASSOCIATED WITH brain disease (ortholog); Breast Cancer, Familial (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955429 16911392 16921353 - 102003166 AGCD01028841;GBDK01285086;XM_005387058 XP_005387115 MODEL 8910197 protein-coding Cacna1g calcium voltage-gated channel subunit alpha1 G ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); scaffold protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN action potential (ortholog); artery smooth muscle contraction (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH absence epilepsy (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955451 11136885 11194321 - 102004345 AGCD01043342;GBDK01097835;XM_005394133;XM_005394135;XM_005394137;XM_005394138;XM_005394139;XM_005394142;XM_005394143;XM_005394144;XM_005394146;XM_005394148;XM_005394149;XM_005394152;XM_005394154;XM_013519070;XM_013519071;XM_013519072;XM_013519073;XM_013519074;XM_013519075;XM_013519076;XM_013519077;XM_013519078;XM_013519079;XM_013519081 XP_005394190;XP_005394192;XP_005394194;XP_005394195;XP_005394196;XP_005394199;XP_005394200;XP_005394201;XP_005394203;XP_005394205;XP_005394206;XP_005394209;XP_005394211;XP_013374524;XP_013374525;XP_013374526;XP_013374527;XP_013374528;XP_013374529;XP_013374530;XP_013374531;XP_013374532;XP_013374533;XP_013374535 MODEL 8877206 protein-coding Arhgef10 Rho guanine nucleotide exchange factor 10 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinesin binding (ortholog); INVOLVED IN centrosome duplication (ortholog); mitotic spindle assembly (ortholog); myelination in peripheral nervous system (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-related birth defects (ortholog); autism spectrum disorder (ortholog); FOUND IN centrosome (ortholog) NW_004955403 57820003 57907324 - 102013788 AGCD01003160;AGCD01003161;AGCD01003162;AGCD01003163;AGCD01003164;AGCD01003165;AGCD01003166;AGCD01003167;GBCQ01176982;XM_013515006;XM_013515009;XM_013515012;XM_013515017 XP_013370460;XP_013370463;XP_013370466;XP_013370471 MODEL 8938520 protein-coding LOC102025089 olfactory receptor 9-like NW_004955458 3200530 3201468 - 102025089 AGCD01047278;XM_013520865 XP_013376319 MODEL 8927955 protein-coding LOC102009205 olfactory receptor 5AN1-like NW_004955511 3886762 3887700 - 102009205 AGCD01066481;XM_005408267 XP_005408324 MODEL 8945604 protein-coding LOC102005424 trafficking protein particle complex subunit 6A NW_004955555 2169073 2183696 - 102005424 AGCD01073131;GBCQ01014265;XM_005412499;XM_005412500;XM_005412502;XM_013508760;XM_013508761;XM_013508762;XM_013508763 XP_005412556;XP_005412557;XP_005412559;XP_013364214;XP_013364215;XP_013364216;XP_013364217 MODEL 8725972 ncrna LOC102005075 uncharacterized LOC102005075 NW_004955433 12925114 12937990 - 102005075 AGCD01031673;XR_261590 MODEL 39131450 protein-coding WNT3 Wnt family member 3 8799243 protein-coding Dbf4 DBF4-CDC7 kinase regulatory subunit ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Dbf4-dependent protein kinase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955432 5245039 5266104 + 102017371 AGCD01030770;GBDF01080724;XM_005387976;XM_005387977;XM_013516044 XP_005388033;XP_005388034;XP_013371498 MODEL 8881689 protein-coding Chd3 chromodomain helicase DNA binding protein 3 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN centrosome cycle (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autistic disorder (ortholog); basal cell carcinoma (ortholog); bipolar disorder (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955467 9024112 9050062 - 102029728 AGCD01051481;GBBH01116472;GBCQ01096262;XM_013522050;XM_013522051;XM_013522052;XM_013522053;XM_013522054;XM_013522055;XM_013522056;XM_013522057;XM_013522058;XM_013522059 XP_013377504;XP_013377505;XP_013377506;XP_013377507;XP_013377508;XP_013377509;XP_013377510;XP_013377511;XP_013377512;XP_013377513 MODEL 8803822 protein-coding Slc14a1 solute carrier family 14 member 1 (Kidd blood group) ENCODES a protein that exhibits urea channel activity (ortholog); urea transmembrane transporter activity (ortholog); water transmembrane transporter activity (ortholog); INVOLVED IN urea transmembrane transport (ortholog); urea transport (ortholog); water transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autoimmune hemolytic anemia (ortholog); cervical cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955402 31320897 31343774 + 102024403 AGCD01000785;GBDI01163529;XM_005372859;XM_005372860 XP_005372916;XP_005372917 MODEL 10381383 protein-coding LOC106148512 proline-rich protein 36-like NW_004955423 23722846 23726302 + 106148512 AGCD01024014;AGCD01024015;XM_013514364 XP_013369818 MODEL 8963970 protein-coding LOC102006527 DNA dC->dU-editing enzyme APOBEC-3C-like NW_004957268 331 1246 + 102006527 AGCD01080664;GBCC01040991;GBDJ01005875;XM_005415226 XP_005415283 MODEL 8704832 protein-coding Bace1 beta-secretase 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); amyloid-beta metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955412 18596643 18620089 - 102026730 AGCD01012945;GBDJ01018816;XM_005378205 XP_005378262 MODEL 9018592 protein-coding Ccdc25 coiled-coil domain containing 25 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN endomembrane system (ortholog); plasma membrane (ortholog) NW_004955403 50268490 50304033 - 102008490 AGCD01002962;AGCD01002963;AGCD01002964;GBDF01006328;XM_005373756;XM_013514313 XP_005373813;XP_013369767 MODEL 8776745 protein-coding Defb119 defensin beta 119 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN innate immune response (ortholog); ASSOCIATED WITH female reproductive system disease (ortholog) NW_004955422 29544805 29550815 + 102024021 AGCD01023401;GBDF01006575;XM_005384921 XP_005384978 MODEL 8932641 protein-coding Dazap1 DAZ associated protein 1 ENCODES a protein that exhibits poly(G) binding (ortholog); poly(U) RNA binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN cell population proliferation (ortholog); maternal placenta development (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955495 6499553 6516227 - 102004293 AGCD01062082;GBBH01091781;GBCB01025416;XM_005405970;XM_005405971;XM_005405972;XM_005405973 XP_005406027;XP_005406028;XP_005406029;XP_005406030 MODEL 8794086 protein-coding Rwdd2a RWD domain containing 2A ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955411 10925958 10929340 + 102013151 AGCD01011798;GBDK01364773;XM_005377687;XM_005377688;XM_013510759 XP_005377744;XP_005377745;XP_013366213 MODEL 8929512 protein-coding Shc1 SHC adaptor protein 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); epidermal growth factor binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) NW_004955545 1468391 1479209 - 102015985 AGCD01071856;GBDF01158976;XM_005411532;XM_005411534 XP_005411589;XP_005411591 MODEL 8821015 protein-coding LOC102007653 protocadherin gamma-A2 NW_004955415 12431046 12434469 - 102007653 AGCD01016196;GBDI01053094;XM_013512164 XP_013367618 MODEL 10061789 protein-coding LOC106147419 vomeronasal type-1 receptor 4-like NW_004955558 322947 323945 + 106147419 AGCD01073364;XM_013508843 XP_013364297 MODEL 8830697 protein-coding Bsph1 binder of sperm protein homolog 1 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN sperm capacitation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog) NW_004955609 261937 266866 + 102013675 AGCD01077055;XM_005414937 XP_005414994 MODEL 39132540 rrna 5S_rRNA 5S ribosomal RNA 8979819 ncrna LOC102011164 uncharacterized LOC102011164 NW_004955403 2029851 2035069 + 102011164 AGCD01001728;GBDF01163401;XR_001233149;XR_001233150 MODEL 9026766 protein-coding Trpc5 transient receptor potential cation channel subfamily C member 5 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN negative regulation of dendrite morphogenesis (ortholog); neuron apoptotic process (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Albuminuria (ortholog); Congenital Microtia (ortholog); dental enamel hypoplasia (ortholog); FOUND IN calcium channel complex (ortholog); cation channel complex (ortholog); dendrite (ortholog) NW_004955490 3777756 4057275 + 102029978 AGCD01060174;AGCD01060175;AGCD01060176;AGCD01060177;AGCD01060178;AGCD01060179;AGCD01060180;XM_005404633;XM_013504508 XP_005404690;XP_013359962 MODEL 39131796 rrna 5S_rRNA 5S ribosomal RNA 8985416 protein-coding Akap8l A-kinase anchoring protein 8 like ENCODES a protein that exhibits histone deacetylase binding (ortholog); lamin binding (ortholog); INVOLVED IN cell cycle G2/M phase transition (ortholog); mitotic chromosome condensation (ortholog); mRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955495 7839339 7874432 + 102008432 AGCD01062169;AGCD01062170;GBDF01004787;XM_005406080;XM_005406081 XP_005406137;XP_005406138 MODEL 8714507 protein-coding Ing3 inhibitor of growth family member 3 ENCODES a protein that exhibits histone H2A acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955479 2741554 2771524 + 102006242 AGCD01056281;GBDF01158853;XM_005402308;XM_005402309;XM_005402310;XM_013503291;XM_013503292 XP_005402365;XP_005402366;XP_005402367;XP_013358745;XP_013358746 MODEL 8925601 protein-coding Eif4e2 eukaryotic translation initiation factor 4E family member 2 ENCODES a protein that exhibits mRNA cap binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); negative regulation of translation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); P-body (ortholog) NW_004955453 3395483 3424649 - 102013901 AGCD01044658;GBCQ01098153;XM_005395367;XM_005395369;XM_013519962;XM_013519963 XP_005395424;XP_005395426;XP_013375416;XP_013375417 MODEL 8835525 protein-coding Ankdd1a ankyrin repeat and death domain containing 1A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog) NW_004955450 10630303 10651918 - 102014514 AGCD01042627;AGCD01042628;GBDF01278959;XM_005393745;XM_005393746 XP_005393802;XP_005393803 MODEL 10323072 protein-coding Ct55 cancer/testis antigen 55 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH X-linked spermatogenic failure 7 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) NW_004956648 483 703 - 106147686 AGCD01079949;GBDF01225515;XM_013510232 XP_013365686 MODEL 8888891 protein-coding Prr12 proline rich 12 INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); body dysmorphic disorder (ortholog); FOUND IN nucleus (ortholog); postsynaptic density (ortholog) NW_004955559 1253216 1279414 - 102011703 AGCD01073638;AGCD01073639;GBBH01228692;XM_005412863;XM_013508984 XP_005412920;XP_013364438 MODEL 8767039 protein-coding Spaca7 sperm acrosome associated 7 INVOLVED IN negative regulation of cell adhesion (ortholog); single fertilization (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog) NW_004955404 1050098 1077184 - 102014315 AGCD01003217;AGCD01003218;GBDF01009174;XM_013515703;XM_013515707 XP_013371157;XP_013371161 MODEL 8877249 protein-coding Lrrc20 leucine rich repeat containing 20 ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955437 20900740 20968294 + 102014287 AGCD01034893;GBDF01118637;XM_005390060;XM_005390062;XM_013517010;XM_013517011;XM_013517012 XP_005390117;XP_005390119;XP_013372464;XP_013372465;XP_013372466 MODEL 8855500 protein-coding Bag6 BAG cochaperone 6 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); misfolded protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); brain development (ortholog); endoplasmic reticulum stress-induced pre-emptive quality control (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN BAT3 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 176848 188243 - 102015444 AGCD01034108;GBCE01031762;XM_005389335;XM_005389336;XM_005389339;XM_005389340;XM_005389341;XM_005389343;XM_005389345;XM_013516841;XM_013516842;XM_013516843;XM_013516844;XM_013516845 XP_005389392;XP_005389393;XP_005389396;XP_005389397;XP_005389398;XP_005389400;XP_005389402;XP_013372295;XP_013372296;XP_013372297;XP_013372298;XP_013372299 MODEL 8886949 protein-coding Etaa1 ETAA1 activator of ATR kinase ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2/M transition checkpoint (ortholog); regulation of DNA damage checkpoint (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nuclear replication fork (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955424 17271690 17321276 - 102025480 AGCD01024759;GBDF01261344;XM_005385677;XM_005385678;XR_001234226;XR_001234227;XR_001234228;XR_001234229;XR_001234230;XR_001234231;XR_001234232;XR_001234233;XR_001234234;XR_001234235;XR_001234236;XR_001234237;XR_261075 XP_005385734;XP_005385735 MODEL 8948405 protein-coding LOC102021937 alcohol dehydrogenase 4 NW_004955405 9357258 9377324 - 102021937 AGCD01004771;GBDI01329017;XM_005374294 XP_005374351 MODEL 8867853 pseudo LOC102006158 nucleobindin-2 pseudogene NW_004955434 753047 754103 - 102006158 AGCD01032038 MODEL 39133884 misc_rna 7SK 7SK RNA 8776985 pseudo LOC102009207 THO complex subunit 4-like NW_004955512 905817 925046 + 102009207 AGCD01066626 MODEL 8944805 protein-coding Col9a3 collagen type IX alpha 3 chain ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN female gonad development (ortholog); male gonad development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); Autoinflammation, Immune Dysregulation, and Eosinophilia (ortholog); Camurati-Engelmann disease (ortholog); FOUND IN collagen type IX trimer (ortholog) NW_004955528 1286314 1305863 - 102024161 AGCD01069558;GBBH01203176;XM_005410012 XP_005410069 MODEL 8975913 protein-coding Actr3 actin related protein 3 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATPase binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); astrocyte differentiation (ortholog); asymmetric cell division (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin filament (ortholog); apical ectoplasmic specialization (ortholog); apical tubulobulbar complex (ortholog) NW_004955459 15216914 15284013 - 102029596 AGCD01048312;AGCD01048313;AGCD01048314;AGCD01048315;AGCD01048316;AGCD01048317;AY533216;GBCC01000263;XM_005397698 AAS59419;XP_005397755 MODEL 8872381 protein-coding Arhgef10l Rho guanine nucleotide exchange factor 10 like ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN positive regulation of stress fiber assembly (ortholog); SREBP signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955527 1315509 1448306 - 102021274 AGCD01069397;AGCD01069398;AGCD01069399;AGCD01069400;AGCD01069401;GBCB01001954;XM_005409809;XM_005409810;XM_005409811;XM_005409812;XM_005409813;XM_013507400;XM_013507401 XP_005409866;XP_005409867;XP_005409868;XP_005409869;XP_005409870;XP_013362854;XP_013362855 MODEL 8864597 protein-coding LOC102003661 starch-binding domain-containing protein 1-like NW_004955421 9799138 9801408 - 102003661 AGCD01021858;XM_013513646 XP_013369100 MODEL 8860742 protein-coding LOC102010344 tubulin alpha-3 chain NW_004955461 6060418 6069340 - 102010344 AGCD01048891;GBDK01010972;XM_005398006 XP_005398063 MODEL 8942950 protein-coding Pnpla1 patatin like domain 1, omega-hydroxyceramide transacylase ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); omega-hydroxyceramide transacylase activity (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); keratinocyte differentiation (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 10 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog) NW_004955437 4008814 4047895 + 102008889 AGCD01034359;GBCQ01173759;XM_013517129;XM_013517130 XP_013372583;XP_013372584 MODEL 8937414 pseudo LOC102005429 uncharacterized LOC102005429 NW_004955585 307477 456009 + 102005429 AGCD01075996;AGCD01075997 MODEL 8704413 protein-coding Chd4 chromodomain helicase DNA binding protein 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); double-strand break repair via homologous recombination (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN centrosome (ortholog); cerebellar granule cell to Purkinje cell synapse (ortholog); chromosome, telomeric region (ortholog) NW_004955413 4191619 4228225 - 102015302 AGCD01013601;AGCD01013602;AGCD01013603;AGCD01013604;GBDK01016911;XM_005378770;XM_013511310;XM_013511311;XM_013511312 XP_005378827;XP_013366764;XP_013366765;XP_013366766 MODEL 8918972 protein-coding Rexo2 RNA exonuclease 2 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN mitochondrial RNA surveillance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) NW_004955412 16025304 16035925 + 102013269 AGCD01012891;GBCQ01066636;XM_005378159;XM_005378160 XP_005378216;XP_005378217 MODEL 9060925 protein-coding Thpo thrombopoietin ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); megakaryocyte development (ortholog); megakaryocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis obliterans (ortholog); cardiomyopathy (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955420 23120828 23128894 + 102017242 AGCD01021227;AGCD01021228;GBDJ01109659;XM_005383308;XM_005383309;XM_005383310;XM_013513327;XM_013513328;XM_013513329 XP_005383365;XP_005383366;XP_005383367;XP_013368781;XP_013368782;XP_013368783 MODEL 9031261 protein-coding Wnt3a Wnt family member 3A ENCODES a protein that exhibits co-receptor binding (ortholog); frizzled binding (ortholog); identical protein binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis elongation involved in somitogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH cervical cancer (ortholog); Experimental Mammary Neoplasms (ortholog); hypothyroidism (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955581 351375 382541 - 102016538 AGCD01075667;AGCD01075668;AGCD01075669;GBDK01185286;XM_005414244 XP_005414301 MODEL 8866009 protein-coding Slc14a2 solute carrier family 14 member 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); urea transmembrane transporter activity (ortholog); INVOLVED IN urea transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955402 30877808 31283983 + 102023214 AGCD01000781;AGCD01000782;GBCQ01010210;XM_005372853;XM_005372854;XM_005372855;XM_005372856;XM_005372857;XM_013510367;XM_013510368;XM_013510374 XP_005372910;XP_005372911;XP_005372912;XP_005372913;XP_005372914;XP_013365821;XP_013365822;XP_013365828 MODEL 9063378 protein-coding Bace2 beta-secretase 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN astrocyte activation (ortholog); glucose homeostasis (ortholog); melanosome organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dense core granule (ortholog); Golgi apparatus (ortholog); melanosome (ortholog) NW_004955407 40792089 40879872 + 102022467 AGCD01007850;AGCD01007851;AGCD01007852;GBBH01042998;GBCE01054363;XM_013505275 XP_013360729 MODEL 8753161 protein-coding Dazap2 DAZ associated protein 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN cytoplasmic stress granule assembly (ortholog); protein destabilization (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear body (ortholog) NW_004955547 1736945 1741623 + 102024284 AGCD01072245;GBCQ01010362;XM_005411904 XP_005411961 MODEL 8902123 protein-coding Atp5mc3 ATP synthase membrane subunit c locus 3 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); INVOLVED IN pore complex assembly (ortholog); response to (R)-carnitine (ortholog); response to ethanol (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cation channel complex (ortholog); mitochondrion (ortholog) NW_004955449 310839 314086 + 102029247 AGCD01041762;GBDJ01006372;XM_005393170 XP_005393227 MODEL 8997349 protein-coding Syvn1 synoviolin 1 ENCODES a protein that exhibits ATPase binding (ortholog); DNA-binding transcription factor binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN ERAD pathway (ortholog); immature B cell differentiation (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); encephalomalacia (ortholog); FOUND IN Derlin-1 retrotranslocation complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955422 20067933 20074947 + 102014912 AGCD01023064;GBDF01047250;XM_005384510;XM_005384511;XM_005384512;XM_013514056 XP_005384567;XP_005384568;XP_005384569;XP_013369510 MODEL 8810179 ncrna LOC102025091 uncharacterized LOC102025091 NW_004955409 24554548 24560508 + 102025091 AGCD01010087;GBDF01074865;XR_001232659;XR_259792 MODEL 8872307 pseudo LOC102018577 cold shock domain-containing protein E1-like NW_004955411 12520079 12522603 + 102018577 AGCD01011850 MODEL 8970252 ncrna LOC102012807 uncharacterized LOC102012807 NW_004955442 3947192 3955740 - 102012807 AGCD01037517;GBBH01153642;XR_262112 MODEL 39134448 misc_rna 7SK 7SK RNA 9034821 protein-coding Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator INVOLVED IN negative regulation of angiogenesis (ortholog); positive regulation of endothelial cell apoptotic process (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955418 1108805 1116338 + 102018288 AGCD01018709;GBCE01053616;XM_005382071;XM_013512910 XP_005382128;XP_013368364 MODEL 8812469 protein-coding LOC102029703 keratin-associated protein 26-1 NW_004955407 29660058 29660955 - 102029703 AGCD01007613;XM_005375626 XP_005375683 MODEL 8955093 ncrna LOC102005078 uncharacterized LOC102005078 NW_004955526 2723249 2727334 - 102005078 AGCD01069312;GBCQ01078069;XR_264658 MODEL 8922139 protein-coding Actr3b actin related protein 3B ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955491 6690246 6741900 + 102004717 AGCD01060570;AGCD01060571;GBBH01036550;GBCE01159382;XM_013504654 XP_013360108 MODEL 8951010 protein-coding Fmo1 flavin containing dimethylaniline monoxygenase 1 ENCODES a protein that exhibits hypotaurine monooxygenase activity (ortholog); monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); glutathione metabolic process (ortholog); negative regulation of fatty acid oxidation (ortholog); PARTICIPATES IN tamoxifen pharmacodynamics pathway; tamoxifen pharmacokinetics pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autism spectrum disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955406 11882656 11915875 + 102022158 AGCD01005897;AGCD01005898;GBDF01063029;XM_005374832;XM_005374833 XP_005374889;XP_005374890 MODEL 8884494 protein-coding LOC102006528 L-gulonolactone oxidase NW_004955403 50132066 50154216 + 102006528 AGCD01002959;GBCE01014649;XM_005373748;XM_005373749;XM_013514239;XM_013514245 XP_005373805;XP_005373806;XP_013369693;XP_013369699 MODEL 8971957 protein-coding Prr13 proline rich 13 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 730805 735528 + 102021208 AGCD01047151;AGCD01047152;GBDF01003931;XM_005397178 XP_005397235 MODEL 9033706 protein-coding Defb121 defensin beta 121 NW_004955422 29525435 29526857 + 102006362 AGCD01023401;GBDJ01258373;XM_005384992 XP_005385049 MODEL 8955503 protein-coding Ccdc27 coiled-coil domain containing 27 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); lung cancer (ortholog) NW_004955486 7895376 7907678 - 102024913 AGCD01059139;GBDF01125652;XM_005404140;XM_013504198;XM_013504199;XR_001231107 XP_005404197;XP_013359652;XP_013359653 MODEL 8741095 protein-coding Adprh ADP-ribosylarginine hydrolase ENCODES a protein that exhibits ADP-ribosylarginine-[protein] hydrolase activity (ortholog); magnesium ion binding (ortholog); potassium ion binding (ortholog); INVOLVED IN protein de-ADP-ribosylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Carcinogenesis (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955427 19271734 19280189 + 102018748 AGCD01027363;GBBH01164641;XM_005386445;XM_013515215 XP_005386502;XP_013370669 MODEL 9032219 pseudo LOC102007654 eukaryotic translation initiation factor 4 gamma 2 pseudogene NW_004955474 10505913 10506428 + 102007654 AGCD01054596;XM_005401468 MODEL 8927634 protein-coding Shc2 SHC adaptor protein 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955495 7216806 7236056 + 102017680 AGCD01062125;GBCB01098221;GBDF01153002;XM_013505336 XP_013360790 MODEL 8879177 protein-coding Spaca9 sperm acrosome associated 9 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN axoneme assembly (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome classic type 1 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal microtubule (ortholog); axonemal microtubule doublet inner sheath (ortholog) NW_004955513 2184878 2196367 + 102028322 AGCD01066870;GBDF01222876;XM_005408384;XM_005408385;XM_005408386;XM_005408387;XM_005408388;XM_005408389 XP_005408441;XP_005408442;XP_005408443;XP_005408444;XP_005408445;XP_005408446 MODEL 8888486 protein-coding Chchd5 coiled-coil-helix-coiled-coil-helix domain containing 5 ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955470 1704461 1708675 - 102025782 AGCD01052653;GBDJ01084263;XM_005400600 XP_005400657 MODEL 39132548 rrna 5S_rRNA 5S ribosomal RNA 8730919 protein-coding Slc15a1 solute carrier family 15 member 1 ENCODES a protein that exhibits channel inhibitor activity (ortholog); dipeptide transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); metanephric proximal tubule development (ortholog); negative regulation of amino acid transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); membrane (ortholog) NW_004955404 11799370 11856854 + 102014734 AGCD01003446;GBDF01119603;XM_005374072 XP_005374129 MODEL 8993938 protein-coding Bahcc1 BAH domain and coiled-coil containing 1 INVOLVED IN chromatin organization (ortholog); locomotory behavior (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955506 1578943 1639048 - 102005822 AGCD01065272;GBDJ01348288;XM_005407278;XM_013506090;XM_013506091;XM_013506092;XM_013506093;XM_013506094;XM_013506095 XP_005407335;XP_013361544;XP_013361545;XP_013361546;XP_013361547;XP_013361548;XP_013361549 MODEL 8982705 protein-coding Etf1 eukaryotic translation termination factor 1 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); sequence-specific mRNA binding (ortholog); translation release factor activity (ortholog); INVOLVED IN regulation of translational termination (ortholog); translational termination (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); nucleus (ortholog) NW_004955418 1943233 1974241 + 102025793 AGCD01018735;GBDF01005274;XM_005382097;XM_005382099;XM_013512964 XP_005382154;XP_005382156;XP_013368418 MODEL 8932351 ncrna LOC102011165 uncharacterized LOC102011165 NW_004955403 10472232 10477715 + 102011165 AGCD01001922;GBDF01249569;XR_259169 MODEL 39131797 rrna 5S_rRNA 5S ribosomal RNA 8776073 protein-coding Trpc5os TRPC5 opposite strand NW_004955490 3952565 3981690 - 102029636 AGCD01060178;AGCD01060179;GBDF01209797;XM_005404632;XM_013504509 XP_005404689;XP_013359963 MODEL 8978905 protein-coding Akap9 A-kinase anchoring protein 9 ENCODES a protein that exhibits molecular adaptor activity (ortholog); potassium channel activator activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); maintenance of centrosome location (ortholog); microtubule nucleation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); Brugada syndrome 1 (ortholog); FOUND IN 9+2 motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955432 8933037 9090872 + 102025829 AGCD01030891;AGCD01030892;GBDJ01000790;XM_005388001;XM_013515942;XM_013515943;XM_013515944;XM_013515945;XM_013515946;XM_013515947 XP_005388058;XP_013371396;XP_013371397;XP_013371398;XP_013371399;XP_013371400;XP_013371401 MODEL 10078643 protein-coding LOC106148513 uncharacterized LOC106148513 NW_004955423 23752193 23759938 + 106148513 AGCD01024016;GBCQ01041065;XM_013514365 XP_013369819 MODEL 8779976 ncrna LOC102012811 uncharacterized LOC102012811 NW_004955559 2195047 2205058 - 102012811 AGCD01073700;AGCD01073701;GBBH01056100;XR_265004 MODEL 8839867 protein-coding Ccdc30 coiled-coil domain containing 30 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955537 2086971 2207825 + 102010523 AGCD01070917;AGCD01070918;AGCD01070919;GBCQ01090404;XM_005410599;XM_005410600;XM_005410601;XM_005410602;XM_005410603;XM_005410604;XM_005410605;XM_005410606;XM_005410607;XM_005410608;XM_013507757;XM_013507758;XM_013507759;XM_013507760;XM_013507761;XM_013507762 XP_005410656;XP_005410657;XP_005410658;XP_005410659;XP_005410660;XP_005410661;XP_005410662;XP_005410663;XP_005410664;XP_005410665;XP_013363211;XP_013363212;XP_013363213;XP_013363214;XP_013363215;XP_013363216 MODEL 8958546 protein-coding LOC102012404 olfactory receptor 6C74-like NW_004955458 2414762 2415699 - 102012404 AGCD01047233;XM_013520846 XP_013376300 MODEL 9038569 protein-coding Dbh dopamine beta-hydroxylase ENCODES a protein that exhibits copper ion binding (ortholog); dopamine beta-monooxygenase activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral response to ethanol (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Anorexia (ortholog); attention deficit hyperactivity disorder (ortholog); brain ischemia (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); dendrite (ortholog) NW_004955513 2918085 2932481 + 102021158 AGCD01066892;GBDK01427732;XM_005408455 XP_005408512 MODEL 8814818 pseudo LOC102003304 putative zinc finger protein 724 NW_004955607 218870 244872 - 102003304 AGCD01076979;AGCD01076980;AGCD01076981;XM_005414905 MODEL 8963666 protein-coding Ct83 cancer/testis antigen 83 NW_004955534 3459257 3460553 + 102020376 AGCD01070584;GBDF01156435;XM_005410471 XP_005410528 MODEL 8788740 protein-coding Ankdd1b ankyrin repeat and death domain containing 1B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); sarcoma (ortholog) NW_004955425 25094742 25154497 - 102023498 AGCD01025909;AGCD01025910;GBDJ01041314;XM_005386046;XM_013514785;XM_013514786;XM_013514787;XM_013514788 XP_005386103;XP_013370239;XP_013370240;XP_013370241;XP_013370242 MODEL 8780625 protein-coding LOC102005435 beta-defensin 33-like NW_004955403 53686697 53694266 + 102005435 AGCD01003067;AGCD01003068;AGCD01003069;GBDK01170251;XM_005373836 XP_005373893 MODEL 8969024 protein-coding Rwdd2b RWD domain containing 2B ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955407 28363476 28371491 - 102024762 AGCD01007581;GBCB01076811;XM_005375609;XM_005375610;XM_005375611 XP_005375666;XP_005375667;XP_005375668 MODEL 8786201 protein-coding Actr5 actin related protein 5 INVOLVED IN chromatin remodeling (ortholog); double-strand break repair (ortholog); positive regulation of DNA repair (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); Ino80 complex (ortholog); nucleus (ortholog) NW_004955445 17991969 18024525 - 102009433 AGCD01039897;AGCD01039898;GBDJ01134091;XM_005392530 XP_005392587 MODEL 39133885 misc_rna 7SK 7SK RNA 8781246 ncrna LOC102009208 uncharacterized LOC102009208 NW_004955514 376958 384322 + 102009208 AGCD01067008;AGCD01067009;GBDF01062503;XR_264490 MODEL 8930253 protein-coding Ing4 inhibitor of growth family member 4 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 4263647 4274476 - 102022903 AGCD01013604;GBDJ01129502;XM_005378800;XM_005378801;XM_005378802;XM_005378803;XM_013511346;XM_013511347;XM_013511348 XP_005378857;XP_005378858;XP_005378859;XP_005378860;XP_013366800;XP_013366801;XP_013366802 MODEL 8919508 protein-coding Colec10 collectin subfamily member 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); D-mannose binding (ortholog); INVOLVED IN complement activation, lectin pathway (ortholog); cranial skeletal system development (ortholog); positive regulation of opsonization (ortholog); ASSOCIATED WITH 3MC syndrome 3 (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955417 24954969 24994188 + 102005592 AGCD01018469;GBDF01130629;XM_005381907 XP_005381964 MODEL 8728966 pseudo LOC102010348 zinc finger CCHC domain-containing protein 8-like NW_004955411 3492784 3499691 - 102010348 AGCD01011553 MODEL 8727328 protein-coding Eif4e3 eukaryotic translation initiation factor 4E family member 3 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955421 16354282 16520422 + 102006921 AGCD01021999;AGCD01022000;AGCD01022001;AGCD01022002;AGCD01022003;AGCD01022004;GBBH01218978;GBCE01142138;XM_005383789;XM_013513679 XP_005383846;XP_013369133 MODEL 8983091 protein-coding Arhgef11 Rho guanine nucleotide exchange factor 11 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of L-glutamate import across plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955545 2988676 3099159 - 102016953 AGCD01071930;AGCD01071931;AGCD01071932;AGCD01071933;GBDK01016455;XM_005411732;XM_005411733;XM_013508275;XM_013508276;XM_013508277;XM_013508279;XM_013508280;XM_013508281;XM_013508282;XM_013508283;XM_013508284 XP_005411789;XP_005411790;XP_013363729;XP_013363730;XP_013363731;XP_013363733;XP_013363734;XP_013363735;XP_013363736;XP_013363737;XP_013363738 MODEL 8786970 protein-coding Lrrc23 leucine rich repeat containing 23 INVOLVED IN flagellated sperm motility (ortholog); radial spoke assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sperm flagellum (ortholog) NW_004955413 4491443 4498283 + 102007100 AGCD01013619;GBDF01003541;XM_005378841;XM_005378842;XM_013511339;XM_013511341 XP_005378898;XP_005378899;XP_013366793;XP_013366795 MODEL 8942093 protein-coding LOC102003305 olfactory receptor 4F4-like NW_004955614 319933 320880 - 102003305 AGCD01077239;XM_005414977 XP_005415034 MODEL 8746088 ncrna LOC102006159 uncharacterized LOC102006159 NW_004955526 3480118 3482226 - 102006159 AGCD01069336;GBDF01015650;XR_264662 MODEL 8902003 pseudo LOC102021938 casein kinase I isoform epsilon pseudogene NW_004955452 11410970 11412430 - 102021938 AGCD01044335;AGCD01044336;XM_005395310 MODEL 8969526 protein-coding Dsg3 desmoglein 3 ENCODES a protein that exhibits protein dimerization activity (ortholog); INVOLVED IN actin filament organization (ortholog); adherens junction assembly (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH BLISTERING, ACANTHOLYTIC, OF ORAL AND LARYNGEAL MUCOSA (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anchoring junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955402 18781511 18811675 + 102017724 AGCD01000540;GBDI01022621;XM_005372742;XM_013506734 XP_005372799;XP_013362188 MODEL 8833442 protein-coding Bach1 BTB domain and CNC homolog 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN DNA repair (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiotoxicity (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955407 28678181 28701115 + 102027488 AGCD01007593;AGCD01007594;GBDF01225784;XM_013504068 XP_013359522 MODEL 8776576 protein-coding Arhgef17 Rho guanine nucleotide exchange factor 17 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955414 18100907 18172905 - 102017653 AGCD01015269;AGCD01015270;AGCD01015271;AGCD01015272;GBCQ01068043;GBDF01178048;XM_013511810 XP_013367264 MODEL 9037256 protein-coding Rad51 RAD51 recombinase ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); chromatin binding (ortholog); INVOLVED IN cellular response to alkaloid (ortholog); cellular response to camptothecin (ortholog); cellular response to cisplatin (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); Brachydactyly, Type E (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955416 7566715 7590628 + 102024794 AGCD01016991;AGCD01016992;AGCD01016993;AGCD01016994;GBDF01087352;XM_005381253 XP_005381310 MODEL 8976319 ncrna LOC102018579 uncharacterized LOC102018579 NW_004955412 17854861 17864100 - 102018579 AGCD01012919;GBDF01209681;XR_259997 MODEL 39133275 snrna U4 U4 spliceosomal RNA 8919442 pseudo LOC102029705 40S ribosomal protein S24 pseudogene NW_004955455 4379776 4380336 - 102029705 AGCD01045673 MODEL 8911576 protein-coding Bahd1 bromo adjacent homology domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin silencing complex (ortholog); nucleoplasm (ortholog) NW_004955416 7376794 7388577 + 102020799 AGCD01016976;GBDF01188849;XM_005381237;XM_013512626;XM_013512627 XP_005381294;XP_013368080;XP_013368081 MODEL 8928418 protein-coding LOC102003664 apoptosis-associated speck-like protein containing a CARD NW_004955493 8053687 8055442 - 102003664 AGCD01061257;GBDF01238687;XM_005405309 XP_005405366 MODEL 8836136 protein-coding Pnpla2 patatin like domain 2, triacylglycerol lipase ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acylglycerol O-acyltransferase activity (ortholog); diolein transacylation activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); intracellular triglyceride homeostasis (ortholog); lipid catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chanarin-Dorfman syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955476 11304660 11309755 - 102009048 AGCD01055448;AGCD01055449;GBCB01003982;GBDI01017656;XM_005401809 XP_005401866 MODEL 10253468 protein-coding LOC106148514 uncharacterized LOC106148514 NW_004955423 28162686 28173956 + 106148514 AGCD01024144;AGCD01024145;GBDF01079843;XM_013514368 XP_013369822 MODEL 8902892 ncrna LOC102012812 uncharacterized LOC102012812 NW_004955446 2324596 2337167 - 102012812 AGCD01039981;GBDF01040343;XR_001235685 MODEL 8803177 protein-coding Ccdc32 coiled-coil domain containing 32 INVOLVED IN cilium organization (ortholog); head development (ortholog); regulation of clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH Cardiofacioneurodevelopmental Syndrome (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN clathrin-coated pit (ortholog) NW_004955416 7464498 7482153 - 102022593 AGCD01016982;AGCD01016983;AGCD01016984;GBDI01224742;XM_005381244;XM_005381245;XM_005381246;XM_005381248;XM_013512647;XM_013512648 XP_005381301;XP_005381302;XP_005381303;XP_005381305;XP_013368101;XP_013368102 MODEL 9066994 protein-coding Rexo4 REX4 homolog, 3'-5' exonuclease ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); double-stranded DNA binding (ortholog); endonuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA repair (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955513 2745220 2754927 - 102015878 AGCD01066888;GBBH01077836;XM_005408440;XM_005408443;XM_005408444;XM_005408445 XP_005408497;XP_005408500;XP_005408501;XP_005408502 MODEL 8952999 protein-coding Fmo2 flavin containing dimethylaniline monoxygenase 2 ENCODES a protein that exhibits monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); NADP+ metabolic process (ortholog); negative regulation of fatty acid oxidation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN membrane (ortholog) NW_004955406 11851694 11875314 + 102021840 AGCD01005897;GBDK01012920;XM_005374831 XP_005374888 MODEL 8845518 pseudo LOC102006532 10 kDa heat shock protein, mitochondrial pseudogene NW_004955451 3071650 3074700 - 102006532 AGCD01043035 MODEL 8736453 protein-coding Arhgef12 Rho guanine nucleotide exchange factor 12 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of blood pressure (ortholog); Rho-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955412 21344671 21497951 + 102012176 AGCD01013021;AGCD01013022;AGCD01013023;XM_005378351;XM_013511068;XM_013511069 XP_005378408;XP_013366522;XP_013366523 MODEL 8877016 protein-coding Wnt4 Wnt family member 4 ENCODES a protein that exhibits frizzled binding (ortholog); receptor ligand activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH 46,XX Sex Reversal with Dysgenesis of Kidneys, Adrenals, and Lungs (ortholog); acute kidney failure (ortholog); Addison's disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular matrix (ortholog) NW_004955452 2319446 2344740 - 102006534 AGCD01043890;AGCD01043891;GBDF01041136;XM_005394734 XP_005394791 MODEL 9004164 protein-coding Ankef1 ankyrin repeat and EF-hand domain containing 1 ASSOCIATED WITH developmental and epileptic encephalopathy 12 (ortholog) NW_004955415 19967234 19988725 + 102023585 AGCD01016482;GBDF01047742;XM_005380869;XM_013512109 XP_005380926;XP_013367563 MODEL 8809253 protein-coding Prr14 proline rich 14 ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nuclear lamina (ortholog); nucleoplasm (ortholog) NW_004955493 7512420 7518310 + 102016718 AGCD01061196;GBDF01043185;XM_005405264;XM_005405266;XM_013504762 XP_005405321;XP_005405323;XP_013360216 MODEL 8724206 protein-coding Defb123 defensin beta 123 NW_004955422 29494221 29496697 - 102023372 AGCD01023399;GBDF01049661;XM_005384919 XP_005384976 MODEL 8869187 protein-coding Szrd1 SUZ RNA binding domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog) NW_004955527 1938477 1961524 - 102027450 AGCD01069420;GBDI01020498;XM_005409829;XM_005409830;XM_005409831;XM_005409832;XM_013507385;XM_013507386 XP_005409886;XP_005409887;XP_005409888;XP_005409889;XP_013362839;XP_013362840 MODEL 8814674 pseudo LOC102025093 zinc finger protein 23-like NW_004955460 9964512 9970986 - 102025093 AGCD01048565 MODEL 8922686 protein-coding LOC102024001 mas-related G-protein coupled receptor member A-like NW_004955414 33461482 33462480 - 102024001 AGCD01015809;XM_005380535 XP_005380592 MODEL 39132549 rrna 5S_rRNA 5S ribosomal RNA 39134449 misc_rna 7SK 7SK RNA 8881260 protein-coding LOC102011167 glycosyltransferase-like protein LARGE1 NW_004955650 55837 106695 - 102011167 AGCD01077795;AGCD01077796;AGCD01077797;AGCD01077798;AGCD01077799;GBDF01278631;GBDI01324495;XM_005415053 XP_005415110 MODEL 8722816 protein-coding Shc3 SHC adaptor protein 3 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); INVOLVED IN learning or memory (ortholog); synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ependymomas (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955515 2858971 3016467 + 102017690 AGCD01067260;AGCD01067261;AGCD01067262;AGCD01067263;AGCD01067264;AGCD01067265;AGCD01067266;AGCD01067267;GBDI01163152;GBDI01244672;XM_005408881 XP_005408938 MODEL 8875310 protein-coding Rad51ap1 RAD51 associated protein 1 ENCODES a protein that exhibits D-loop DNA binding (ortholog); DNA binding (ortholog); DNA secondary structure binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); DNA recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955413 2335431 2362781 + 102004153 AGCD01013544;XM_005378737;XM_013511568 XP_005378794;XP_013367022 MODEL 8700307 ncrna LOC102005079 uncharacterized LOC102005079 NW_004955437 3889822 3896136 - 102005079 AGCD01034353;AGCD01034354;GBDF01014278;XR_001235105;XR_001235106;XR_261849;XR_261850 MODEL 9039289 protein-coding Akip1 A-kinase interacting protein 1 INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); diastolic heart failure (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955414 24667718 24677556 + 102024215 AGCD01015552;GBDF01120946;XM_005380245;XM_005380246;XM_013512045;XM_013512046;XR_001233171 XP_005380302;XP_005380303;XP_013367499;XP_013367500 MODEL 8808180 pseudo LOC102012409 5-azacytidine-induced protein 2 pseudogene NW_004955409 26519198 26520981 - 102012409 AGCD01010189 MODEL 8783600 protein-coding Chd5 chromodomain helicase DNA binding protein 5 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cerebral cortex neuron differentiation (ortholog); chromatin remodeling (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); anxiety disorder (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); heterochromatin (ortholog) NW_004955486 6320380 6369020 + 102014675 AGCD01059118;AGCD01059119;GBDJ01304435;XM_005404102;XM_005404103;XM_005404104;XM_005404105 XP_005404159;XP_005404160;XP_005404161;XP_005404162 MODEL 8772237 protein-coding Thra thyroid hormone receptor alpha ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); animal organ morphogenesis (ortholog); cartilage condensation (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955451 14731746 14743545 + 102009675 AGCD01043569;AGCD01043570;GBCB01002160;XM_005394347 XP_005394404 MODEL 8892538 protein-coding Dbi diazepam binding inhibitor, acyl-CoA binding protein ENCODES a protein that exhibits benzodiazepine receptor binding (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to nutrient (ortholog); conditioned place preference (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN contractile muscle fiber (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955459 10342528 10347700 - 102023439 AGCD01048186;GBBH01031932;XM_005397678;XM_013521081 XP_005397735;XP_013376535 MODEL 8809962 protein-coding Ccdc28a coiled-coil domain containing 28A INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955436 20849493 20875284 - 102015563 AGCD01034043;GBDF01003241;XM_005389270;XM_013516693;XM_013516694;XM_013516695;XM_013516696 XP_005389327;XP_013372147;XP_013372148;XP_013372149;XP_013372150 MODEL 9036934 pseudo LOC102012410 cullin-4B pseudogene NW_004955462 1327574 1331025 - 102012410 AGCD01049112 MODEL 9058367 ncrna LOC102003306 uncharacterized LOC102003306 NW_004955403 49841723 49842763 + 102003306 AGCD01002951;GBDF01153033;XR_259250 MODEL 9023358 protein-coding Slc15a2 solute carrier family 15 member 2 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); high-affinity oligopeptide transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); dipeptide import across plasma membrane (ortholog); dipeptide transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog); phagocytic vesicle membrane (ortholog) NW_004955427 21221778 21255725 + 102005279 AGCD01027436;AGCD01027437;AGCD01027438;AGCD01027439;GBCE01001662;XM_005386496;XM_013515099;XM_013515100 XP_005386553;XP_013370553;XP_013370554 MODEL 39131799 rrna 5S_rRNA 5S ribosomal RNA 39133886 misc_rna 7SK 7SK RNA 8876460 protein-coding LOC102009212 uncharacterized LOC102009212 NW_004955436 1320800 1334990 - 102009212 AGCD01033575;GBDK01015463;XM_013516600;XR_001234945;XR_001234946;XR_001234947;XR_001234948;XR_001234949;XR_261735;XR_261738 XP_013372054 MODEL 8825045 protein-coding Ecsit ECSIT signaling integrator ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); mesoderm formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial complex I intermediate assembly complex (ortholog) NW_004955495 2375992 2385962 - 102025021 AGCD01061769;GBBH01098612;XM_005405668;XM_013505114;XM_013505115 XP_005405725;XP_013360568;XP_013360569 MODEL 8763512 protein-coding Trpc6 transient receptor potential cation channel subfamily C member 6 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to hypoxia (ortholog); negative regulation of dendrite morphogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Brain Hypoxia-Ischemia (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955412 4905039 5019678 - 102008513 AGCD01012608;AGCD01012609;AGCD01012610;AGCD01012611;AGCD01012612;GBCE01034660;GBDK01169350;XM_013511254 XP_013366708 MODEL 8751217 protein-coding Colec11 collectin subfamily member 11 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent carbohydrate binding (ortholog); D-mannose binding (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); complement activation (ortholog); complement activation, lectin pathway (ortholog); ASSOCIATED WITH 3MC syndrome (ortholog); 3MC syndrome 1 (ortholog); 3MC syndrome 2 (ortholog); FOUND IN extracellular region (ortholog) NW_004955487 3778901 3789852 - 102017991 AGCD01059293;AGCD01059294;GBDK01061498;XM_005404374;XM_013504346 XP_005404431;XP_013359800 MODEL 9008608 protein-coding Ing5 inhibitor of growth family member 5 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog); histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog) NW_004955542 135634 160991 - 102004642 AGCD01071457;AGCD01071458;AGCD01071459;AGCD01071460;AGCD01071461;GBCQ01093107;XM_005411116;XM_005411118;XM_013508089;XM_013508090;XM_013508091;XM_013508092;XM_013508093;XM_013508094;XM_013508095 XP_005411173;XP_005411175;XP_013363543;XP_013363544;XP_013363545;XP_013363546;XP_013363547;XP_013363548;XP_013363549 MODEL 8775797 protein-coding Ctage5 CTAGE family member 5, ER export factor ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955409 21968308 22081072 - 102014985 AGCD01009998;AGCD01009999;AGCD01010000;AGCD01010001;AGCD01010002;AGCD01010003;AGCD01010004;AGCD01010005;AGCD01010006;AGCD01010007;AGCD01010008;GBCB01001295;XM_005376883 XP_005376940 MODEL 8965540 protein-coding Pnpla3 patatin like domain 3, 1-acylglycerol-3-phosphate O-acyltransferase ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); A2-type glycerophospholipase activity (ortholog); diolein transacylation activity (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to insulin stimulus (ortholog); glycerophospholipid metabolic process (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); alcoholic liver cirrhosis (ortholog); anxiety disorder (ortholog); FOUND IN lipid droplet (ortholog); membrane (ortholog) NW_004955413 28879646 28896224 + 102019902 AGCD01014572;GBDK01116835;XM_005379450;XM_005379451 XP_005379507;XP_005379508 MODEL 8777159 protein-coding Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein phosphatase 2A binding (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to hypoxia (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955463 13702434 13720875 + 102018576 AGCD01049885;GBBH01185303;XM_005398430 XP_005398487 MODEL 8988150 ncrna LOC102005440 uncharacterized LOC102005440 NW_004955405 37765968 37767069 + 102005440 AGCD01005459;GBDF01250670;XR_001236121 MODEL 8787692 pseudo LOC102007660 calcyclin-binding protein-like NW_004955418 14381275 14381936 + 102007660 AGCD01019075 MODEL 10123570 protein-coding LOC106147420 vomeronasal type-1 receptor 4-like NW_004955558 500333 501256 - 106147420 AGCD01073374;XM_013508844 XP_013364298 MODEL 8804133 ncrna LOC102006162 uncharacterized LOC102006162 NW_004955534 59116 62830 + 102006162 AGCD01070434;AGCD01070435;XR_264754 MODEL 8856318 protein-coding Rwdd3 RWD domain containing 3 INVOLVED IN positive regulation of hypoxia-inducible factor-1alpha signaling pathway (ortholog); positive regulation of protein sumoylation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955435 398707 412476 + 102019947 AGCD01032725;AGCD01032726;GBCQ01096523;XM_005388762;XM_013516467 XP_005388819;XP_013371921 MODEL 8743853 protein-coding Chd6 chromodomain helicase DNA binding protein 6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); transcription coregulator binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH adult spinal cord ependymoma (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955445 15360074 15576410 + 102028808 AGCD01039843;AGCD01039844;AGCD01039845;AGCD01039846;AGCD01039847;GBDF01040678;XM_005392507;XM_005392508;XM_005392509;XM_013518270;XM_013518271;XM_013518272;XM_013518273;XM_013518274 XP_005392564;XP_005392565;XP_005392566;XP_013373724;XP_013373725;XP_013373726;XP_013373727;XP_013373728 MODEL 730469372 snorna SNORA43 Small nucleolar RNA SNORA43 8720145 protein-coding LOC102021945 granzyme H-like NW_004955409 35505067 35515345 + 102021945 AGCD01010424;AGCD01010425;GBDK01074391;XM_005376986;XM_005376989;XM_005376990;XM_013510455 XP_005377043;XP_005377046;XP_005377047;XP_013365909 MODEL 8921997 protein-coding Dsg4 desmoglein 4 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell-cell adhesion (ortholog); hair follicle development (ortholog); ASSOCIATED WITH alopecia (ortholog); genetic disease (ortholog); hypotrichosis (ortholog); FOUND IN desmosome (ortholog); plasma membrane (ortholog) NW_004955402 18724959 18754232 + 102024074 AGCD01000537;AGCD01000538;XM_005373160 XP_005373217 MODEL 8737941 protein-coding Arhgef18 Rho/Rac guanine nucleotide exchange factor 18 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); negative regulation of stress fiber assembly (ortholog); protein localization to cell-cell junction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); cytosol (ortholog) NW_004955563 1745202 1823411 - 102006295 AGCD01074160;AGCD01074161;AGCD01074162;AGCD01074163;GBBH01064561;GBCE01135118;XM_013509143;XM_013509144 XP_013364597;XP_013364598 MODEL 39133277 snrna U4 U4 spliceosomal RNA 8907204 pseudo LOC102018581 14-3-3 protein zeta/delta pseudogene NW_004955466 5972796 5973429 + 102018581 AGCD01050899;XM_005399250 MODEL 8988956 ncrna LOC102003665 uncharacterized LOC102003665 NW_004955422 25513884 25522156 + 102003665 AGCD01023251;GBDF01153136;XR_260914 MODEL 8805733 protein-coding Shc4 SHC adaptor protein 4 ENCODES a protein that exhibits protein domain specific binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); positive regulation of cell population proliferation (ortholog); regulation of gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955409 5000209 5111352 + 102010874 AGCD01009306;AGCD01009307;GBDF01188743;XM_005376697 XP_005376754 MODEL 8773692 protein-coding Rad51ap2 RAD51 associated protein 2 ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955469 312601 320227 - 102025563 AGCD01052219;AGCD01052220;GBDF01078994;XM_005415294 XP_005415351 MODEL 8739501 protein-coding Baiap2 BAR/IMD domain containing adaptor protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955506 1868624 1936786 - 102014380 AGCD01065277;GBBH01064214;XM_005407312;XM_005407314;XM_013506073;XM_013506074;XM_013506075 XP_005407369;XP_005407371;XP_013361527;XP_013361528;XP_013361529 MODEL 39133887 misc_rna 7SK 7SK RNA 8735834 protein-coding Spacdr sperm acrosome developmental regulator INVOLVED IN spermatid development (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955410 31509985 31513231 - 102019038 AGCD01011327;GBDF01001669;XM_005377495;XM_005377496 XP_005377552;XP_005377553 MODEL 8800074 protein-coding Akirin1 akirin 1 INVOLVED IN myoblast migration involved in skeletal muscle regeneration (ortholog); negative regulation of satellite cell differentiation (ortholog); negative regulation of skeletal muscle satellite cell proliferation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 16607980 16624376 + 102021083 AGCD01044520;AGCD01044521;GBDF01008545;XM_005395237 XP_005395294 MODEL 8840166 protein-coding Lrrc24 leucine rich repeat containing 24 NW_004955454 3146712 3151828 - 102015921 AGCD01045057;GBDI01226178;XM_005395923;XM_005395928;XM_013520073;XM_013520074 XP_005395980;XP_005395985;XP_013375527;XP_013375528 MODEL 8708441 protein-coding Ccdc33 coiled-coil domain containing 33 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN peroxisome (ortholog) NW_004955450 3485789 3576768 - 102015260 AGCD01042436;GBDK01395390;XM_005393560;XM_005393569;XM_005393570;XM_013519027;XM_013519028;XM_013519029;XM_013519030;XM_013519031;XM_013519032;XM_013519033;XM_013519034;XM_013519035 XP_005393617;XP_005393626;XP_005393627;XP_013374481;XP_013374482;XP_013374483;XP_013374484;XP_013374485;XP_013374486;XP_013374487;XP_013374488;XP_013374489 MODEL 9020423 protein-coding Rexo5 RNA exonuclease 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955493 103588 144412 + 102028764 AGCD01060838;AGCD01060839;GBDK01195535;XM_005405029;XM_005405030;XM_005405032;XM_005405033 XP_005405086;XP_005405087;XP_005405089;XP_005405090 MODEL 8969464 protein-coding Ccdc28b coiled-coil domain containing 28B INVOLVED IN cilium assembly (ortholog); social behavior (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); cone-rod dystrophy (ortholog); FOUND IN centrosome (ortholog) NW_004955452 10568992 10573811 + 102017297 AGCD01044280;GBDF01307658;XM_005395052 XP_005395109 MODEL 8807940 protein-coding Thrap3 thyroid hormone receptor associated protein 3 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian rhythm (ortholog); mRNA stabilization (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN exon-exon junction complex (ortholog); mediator complex (ortholog); nuclear speck (ortholog) NW_004955452 14233155 14282521 + 102003201 AGCD01044459;AGCD01044460;AGCD01044461;AGCD01044462;GBDF01049619;XM_005395182;XM_005395183;XM_005395184 XP_005395239;XP_005395240;XP_005395241 MODEL 8823913 protein-coding Wnt5a Wnt family member 5A ENCODES a protein that exhibits chemoattractant activity involved in axon guidance (ortholog); cytokine activity (ortholog); frizzled binding (ortholog); INVOLVED IN ameboidal-type cell migration (ortholog); anterior/posterior axis specification, embryo (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955430 5304817 5325684 - 102006806 AGCD01029259;AY463493;GBCE01188526;GBDJ01145960;XM_005387380 XP_005387437 MODEL 8961424 protein-coding Etfa electron transfer flavoprotein subunit alpha ENCODES a protein that exhibits electron transfer activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); genetic disease (ortholog); glutaric acidemia type 3 (ortholog); FOUND IN electron transfer flavoprotein complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955450 1392526 1451591 - 102017080 AGCD01042364;GBDF01121130;XM_005393471 XP_005393528 MODEL 39131563 protein-coding DEFB124 defensin beta 124 8993626 protein-coding Arhgef15 Rho guanine nucleotide exchange factor 15 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN negative regulation of synapse maturation (ortholog); positive regulation of Rho protein signal transduction (ortholog); positive regulation of stress fiber assembly (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH brain small vessel disease 5 with osteoporosis (ortholog); Breast Cancer, Familial (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955467 8590217 8603778 - 102018908 AGCD01051459;AGCD01051460;AGCD01051461;GBDK01137479;XM_005399414;XM_005399415;XM_013522174;XM_013522175;XM_013522176 XP_005399471;XP_005399472;XP_013377628;XP_013377629;XP_013377630 MODEL 8979331 protein-coding Prr14l proline rich 14 like ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955455 5802877 5875442 - 102015282 AGCD01045753;AGCD01045754;AGCD01045755;AGCD01045756;AGCD01045757;GBDF01253157;XM_005396334;XM_005396335;XM_013520339;XM_013520340;XM_013520341;XM_013520342;XM_013520343;XM_013520344 XP_005396391;XP_005396392;XP_013375793;XP_013375794;XP_013375795;XP_013375796;XP_013375797;XP_013375798 MODEL 8964463 protein-coding Szt2 SZT2 subunit of KICSTOR complex INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); central nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN GATOR1 complex (ortholog); GATOR2 complex (ortholog); KICSTOR complex (ortholog) NW_004955537 2968839 3017863 + 102027676 AGCD01070940;GBCE01137134;XM_005410657;XM_005410658;XM_013507749 XP_005410714;XP_005410715;XP_013363203 MODEL 39132552 rrna 5S_rRNA 5S ribosomal RNA 8892583 protein-coding LOC102025094 ubiquitin carboxyl-terminal hydrolase 42 NW_004955460 13645785 13690072 - 102025094 AGCD01048713;AGCD01048714;AGCD01048715;AGCD01048716;AGCD01048717;AGCD01048718;GBDI01136910;GBDJ01280509;XM_013521210 XP_013376664 MODEL 8902891 pseudo LOC102011168 telomeric repeat-binding factor 1 pseudogene NW_004957891 76 1145 - 102011168 AGCD01081287 MODEL 8709888 ncrna LOC102010349 uncharacterized LOC102010349 NW_004955465 9065822 9075222 + 102010349 AGCD01050484;GBDK01032471;XR_001236720;XR_263253 MODEL 9042857 protein-coding LOC102029709 uncharacterized LOC102029709 NW_004955407 152915 155449 - 102029709 AGCD01006730;XM_013505864 XP_013361318 MODEL 8953922 protein-coding Slc15a3 solute carrier family 15 member 3 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); peptidoglycan transmembrane transporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); peptidoglycan transport (ortholog); positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); melanoma (ortholog); FOUND IN endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955511 5574686 5582992 - 102019192 AGCD01066571;AGCD01066572;GBDI01323373;GBDJ01315022;XM_005408288 XP_005408345 MODEL 10276401 ncrna LOC106148515 uncharacterized LOC106148515 NW_004955423 23695375 23699710 - 106148515 AGCD01024011;AGCD01024012;GBDK01177112;XR_001234047 MODEL 8763434 protein-coding LOC102005080 transcription termination factor 3, mitochondrial-like NW_004955536 102197 103480 + 102005080 AGCD01070713;XM_013507725 XP_013363179 MODEL 9042548 pseudo LOC102012813 general transcription factor IIH subunit 2-like NW_004955446 10843415 10844092 + 102012813 AGCD01040191 MODEL 8725099 protein-coding Dbn1 drebrin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal motor inhibitor activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell communication by chemical coupling (ortholog); cell communication by electrical coupling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); anchoring junction (ortholog) NW_004955408 29695442 29705417 - 102027948 AGCD01008766;AGCD01008767;GBBH01209235;GBCB01098197;XM_013506526 XP_013361980 MODEL 8775760 protein-coding Ctbp1 C-terminal binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); GABA-ergic synapse (ortholog) NW_004955514 630168 652817 - 102014387 AGCD01067016;GBCC01048888;XM_005408694;XM_005408695 XP_005408751;XP_005408752 MODEL 8994071 protein-coding Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); translation repressor activity (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); memory (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); neuronal ribonucleoprotein granule (ortholog); nucleus (ortholog) NW_004955437 20844750 20879874 - 102013760 AGCD01034888;AGCD01034889;AGCD01034890;GBDI01072458;XM_005390059;XM_013517009 XP_005390116;XP_013372463 MODEL 9012132 ncrna LOC102024003 uncharacterized LOC102024003 NW_004955416 1130935 1134505 + 102024003 AGCD01016825;GBDF01211129;XR_260345 MODEL 8988136 pseudo LOC102003307 uncharacterized protein C12orf31 homolog pseudogene NW_004955451 1129592 1137451 - 102003307 AGCD01042960 MODEL 39134450 misc_rna 7SK 7SK RNA 730469205 snorna SNORA43 Small nucleolar RNA SNORA43 39131800 rrna 5S_rRNA 5S ribosomal RNA 8964549 protein-coding Ect2 epithelial cell transforming 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); cell morphogenesis (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955420 2769542 2827843 + 102003552 AGCD01020608;AGCD01020609;GBDF01158253;XM_005383013;XM_005383014;XM_013513629;XM_013513630;XM_013513631 XP_005383070;XP_005383071;XP_013369083;XP_013369084;XP_013369085 MODEL 9062884 ncrna LOC102006535 uncharacterized LOC102006535 NW_004955452 9481411 9485884 + 102006535 AGCD01044238;GBDF01118568;XR_001236068;XR_001236069;XR_001236070;XR_001236071 MODEL 8761432 protein-coding Shcbp1 SHC binding and spindle associated 1 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN midbody (ortholog); mitotic spindle (ortholog) NW_004955448 74969 141627 - 102013229 AGCD01041217;AGCD01041218;AGCD01041219;AGCD01041220;AGCD01041221;AGCD01041222;GBDF01086273;XM_005392972;XM_005392973;XM_013518688 XP_005393029;XP_005393030;XP_013374142 MODEL 8901951 protein-coding Colec12 collectin subfamily member 12 ENCODES a protein that exhibits low-density lipoprotein particle binding (ortholog); pattern recognition receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); immune response (ortholog); phagocytosis, recognition (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955402 9445419 9614956 + 102017936 AGCD01000217;AGCD01000218;AGCD01000219;AGCD01000220;AGCD01000221;AGCD01000222;AGCD01000223;AGCD01000224;GBCE01101961;XM_005373148 XP_005373205 MODEL 39133888 misc_rna 7SK 7SK RNA 9066356 protein-coding Fmo4 flavin containing dimethylaniline monoxygenase 4 ENCODES a protein that exhibits monooxygenase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); negative regulation of fatty acid oxidation (ortholog); xenobiotic catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 11967045 11987105 + 102019569 AGCD01005900;GBCQ01059459;XM_013520621;XM_013520625 XP_013376075;XP_013376079 MODEL 39132080 snorna SNORD24 Small nucleolar RNA SNORD24 8873443 protein-coding Inha inhibin subunit alpha ENCODES a protein that exhibits inhibin binding (ortholog); protein sequestering activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN hemoglobin biosynthetic process (ortholog); male gonad development (ortholog); negative regulation of activin receptor signaling pathway (ortholog); ASSOCIATED WITH dysgerminoma (ortholog); embryonal carcinoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN extracellular region (ortholog); inhibin A complex (ortholog); inhibin B complex (ortholog) NW_004955453 13902443 13905008 - 102030150 AGCD01044854;GBDJ01080673;XM_005395512 XP_005395569 MODEL 8716753 ncrna LOC102012411 uncharacterized LOC102012411 NW_004955411 2942448 2946613 + 102012411 AGCD01011526;GBCQ01140642;XR_259913 MODEL 8959727 protein-coding Rad51b RAD51 paralog B ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); double-stranded DNA binding (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN blastocyst growth (ortholog); double-strand break repair via homologous recombination (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Rad51B-Rad51C-Rad51D-XRCC2 complex (ortholog); replication fork (ortholog) NW_004955466 1686472 2388146 - 102006230 AGCD01050717;AGCD01050718;AGCD01050719;AGCD01050720;AGCD01050721;AGCD01050722;AGCD01050723;AGCD01050724;AGCD01050725;AGCD01050726;AGCD01050727;AGCD01050728;AGCD01050729;AGCD01050730;AGCD01050731;AGCD01050732;AGCD01050733;AGCD01050734;AGCD01050735;AGCD01050736;GBBH01025954;XM_005399051;XM_005399052;XM_013521905;XM_013521906;XM_013521907;XM_013521908;XM_013521909;XM_013521910;XM_013521912;XM_013521913;XM_013521914;XM_013521915;XM_013521916;XM_013521917;XR_001236784;XR_001236785;XR_001236786;XR_001236787;XR_001236788;XR_001236789;XR_001236790;XR_001236791 XP_005399108;XP_005399109;XP_013377359;XP_013377360;XP_013377361;XP_013377362;XP_013377363;XP_013377364;XP_013377366;XP_013377367;XP_013377368;XP_013377369;XP_013377370;XP_013377371 MODEL 8954256 protein-coding LOC102005442 endothelin-converting enzyme-like 1 NW_004955453 3475528 3480680 + 102005442 AGCD01044660;GBDJ01085718;GBDK01397222;XM_013520001 XP_013375455 MODEL 8824623 protein-coding Pxt1 peroxisomal testis enriched protein 1 INVOLVED IN positive regulation of apoptotic process (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); peroxisome (ortholog) NW_004955437 4096740 4105794 - 102009986 AGCD01034360;GBDF01177457;XM_005389592;XM_005389593 XP_005389649;XP_005389650 MODEL 8849300 protein-coding Lrrc25 leucine rich repeat containing 25 INVOLVED IN canonical NF-kappaB signal transduction (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); gene expression (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955524 3118305 3122125 + 102023067 AGCD01068859;GBBH01185481;XM_005409572 XP_005409629 MODEL 8941072 ncrna LOC102021946 uncharacterized LOC102021946 NW_004955461 13349769 13385164 - 102021946 AGCD01049036;AGCD01049037;GBDF01261825;XR_263085 MODEL 8764373 protein-coding Cacna1h calcium voltage-gated channel subunit alpha1 H ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); scaffold protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN aldosterone biosynthetic process (ortholog); calcium ion import (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); apraxia (ortholog); FOUND IN caveola (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955442 16047965 16108862 - 102012368 AGCD01037891;GBDI01368048;XM_013517978;XM_013517979;XM_013517980;XM_013517981;XM_013517982;XM_013517983;XR_001235422 XP_013373432;XP_013373433;XP_013373434;XP_013373435;XP_013373436;XP_013373437 MODEL 8899639 protein-coding Wnt5b Wnt family member 5B ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); esophageal cancer (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) NW_004955454 4158648 4192709 + 102025082 AGCD01045118;AGCD01045119;GBDK01139056;XM_005395951;XM_005395953;XM_013520275;XM_013520276;XM_013520277 XP_005396008;XP_005396010;XP_013375729;XP_013375730;XP_013375731 MODEL 8863582 protein-coding Chd7 chromodomain helicase DNA binding protein 7 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); promoter-specific chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN adult heart development (ortholog); adult walking behavior (ortholog); aorta development (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH 3MC syndrome (ortholog); 46, XY Disorders of Sex Development (ortholog); 46,XY complete gonadal dysgenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955444 17859999 18067623 - 102029131 AGCD01039226;AGCD01039227;GBDJ01315010;XM_005392181;XM_005392182;XM_005392183 XP_005392238;XP_005392239;XP_005392240 MODEL 8958786 protein-coding Dsn1 DSN1 component of MIS12 kinetochore complex INVOLVED IN skeletal muscle satellite cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN fibrillar center (ortholog); kinetochore (ortholog); MIS12/MIND type complex (ortholog) NW_004955422 24876340 24896435 + 102021359 AGCD01023238;GBDF01052835;XM_005384734;XM_005384736;XM_013514023 XP_005384791;XP_005384793;XP_013369477 MODEL 39133280 snrna U4 U4 spliceosomal RNA 8712631 ncrna LOC102009219 uncharacterized LOC102009219 NW_004955438 11481547 11499549 - 102009219 AGCD01035239;AGCD01035240;GBDF01306429;XR_261927 MODEL 8984242 protein-coding Arhgef16 Rho guanine nucleotide exchange factor 16 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); positive regulation of protein localization to plasma membrane (ortholog); regulation of Cdc42 protein signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955486 8109291 8128184 - 102027986 AGCD01059147;GBBH01164246;XM_005404151;XM_005404152;XM_005404153 XP_005404208;XP_005404209;XP_005404210 MODEL 9008537 protein-coding Arhgef19 Rho guanine nucleotide exchange factor 19 INVOLVED IN regulation of actin cytoskeleton organization (ortholog); wound healing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955527 2073009 2087291 + 102003060 AGCD01069421;GBBH01003131;XM_005409842;XM_005409843;XM_005409844;XM_013507389;XM_013507390 XP_005409899;XP_005409900;XP_005409901;XP_013362843;XP_013362844 MODEL 8999123 ncrna LOC102025097 uncharacterized LOC102025097 NW_004955411 5016033 5019994 + 102025097 AGCD01011593;GBDJ01318909;XR_259918 MODEL 39131801 rrna 5S_rRNA 5S ribosomal RNA 8986734 protein-coding Slc15a4 solute carrier family 15 member 4 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); L-histidine transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); histidine transport (ortholog); L-histidine transmembrane export from vacuole (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome membrane (ortholog); endosome membrane (ortholog) NW_004955482 2327137 2343980 + 102006458 AGCD01057244;GBBH01117824;XM_013503714 XP_013359168 MODEL 9019891 pseudo LOC102011172 translationally-controlled tumor protein pseudogene NW_004955405 31816779 31817304 - 102011172 AGCD01005306;XM_005374671 MODEL 8978206 protein-coding Baiap2l1 BAR/IMD domain containing adaptor protein 2 like 1 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN positive regulation of actin filament polymerization (ortholog); regulation of actin cytoskeleton organization (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955460 14174592 14259416 - 102029716 AGCD01048742;GBDF01160954;GBDK01139385;XM_005397915 XP_005397972 MODEL 8731970 protein-coding Akirin2 akirin 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); defense response to bacterium (ortholog); embryo development ending in birth or egg hatching (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleoplasm (ortholog) NW_004955411 14600106 14619374 - 102029487 AGCD01011922;AGCD01011923;GBCB01023416;GBCE01077564;XM_005377736 XP_005377793 MODEL 8941523 protein-coding LOC102005082 heat shock 70 kDa protein 1B NW_004955437 356898 358735 + 102005082 AGCD01034126;GBBH01030858;GBCB01006678;XM_005390107 XP_005390164 MODEL 10388049 pseudo LOC106147421 zinc finger protein 615-like NW_004955558 567931 569339 - 106147421 AGCD01073376 MODEL 8848038 protein-coding LOC102006164 24-hydroxycholesterol 7-alpha-hydroxylase ENCODES a protein that exhibits 24S-hydroxycholesterol 7-alpha-hydroxylase activity (ortholog); steroid 7-alpha-hydroxylase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); cholesterol catabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955437 11444780 11497268 - 102006164 AGCD01034574;GBDK01017216;XM_005389856 XP_005389913 MODEL 8831496 protein-coding Ccdc34 coiled-coil domain containing 34 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN sperm end piece (ortholog); sperm head-tail coupling apparatus (ortholog); sperm midpiece (ortholog) NW_004955476 6589506 6604070 - 102015837 AGCD01055335;AGCD01055336;GBBH01140938;GBBH01140941;XM_013502966 XP_013358420 MODEL 8822981 protein-coding Defb127 defensin beta 127 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog) NW_004955597 38613 40241 + 102025199 AGCD01076533;XM_005414733 XP_005414790 MODEL 39131360 protein-coding EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3 8892553 ncrna LOC102024006 uncharacterized LOC102024006 NW_004955417 28844701 28851338 - 102024006 AGCD01018588;GBDK01125490;XR_260512 MODEL 39132558 rrna 5S_rRNA 5S ribosomal RNA 8971233 protein-coding Taar1 trace amine associated receptor 1 ENCODES a protein that exhibits G protein-coupled amine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); trace-amine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN endomembrane system (ortholog); plasma membrane (ortholog) NW_004955436 13204876 13207928 - 102024376 AGCD01033855;XM_005389216 XP_005389273 MODEL 8789674 protein-coding LOC102003666 dnaJ homolog subfamily B member 6-like NW_004955423 9538198 9539071 - 102003666 AGCD01023662;GBDF01008801;XM_013514572 XP_013370026 MODEL 8961466 protein-coding LOC102018584 C-type lectin domain family 12 member A-like NW_004955413 5408723 5416010 - 102018584 AGCD01013670;GBDK01238521;XM_005378879;XM_005378881;XR_001232931 XP_005378936;XP_005378938 MODEL 8997979 ncrna LOC102010354 uncharacterized LOC102010354 NW_004955468 803292 804816 + 102010354 AGCD01051739;GBDF01089481;XR_263369 MODEL 730469209 snorna SNORA43 Small nucleolar RNA SNORA43 9007734 ncrna LOC102007661 uncharacterized LOC102007661 NW_004955482 3985965 4000816 - 102007661 AGCD01057276;AGCD01057277;AGCD01057278;GBDF01089354;XR_001231002;XR_001231003;XR_263828 MODEL 9012535 pseudo LOC102012815 poly(rC)-binding protein 2 pseudogene NW_004955576 1428099 1429219 + 102012815 AGCD01075376 MODEL 10356258 protein-coding LOC106148516 uncharacterized LOC106148516 NW_004955423 23705756 23706658 + 106148516 AGCD01024012;GBDK01062321;XM_013514372 XP_013369826 MODEL 8991425 protein-coding Ptbp3 polypyrimidine tract binding protein 3 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); negative regulation of RNA splicing (ortholog); regulation of cell differentiation (ortholog) NW_004955419 15002780 15101588 + 102005474 AGCD01020055;AGCD01020056;AGCD01020057;GBDF01088480;GBDF01088481;XM_013513256;XM_013513257;XM_013513258;XM_013513259 XP_013368710;XP_013368711;XP_013368712;XP_013368713 MODEL 8742122 protein-coding Rwdd4 RWD domain containing 4 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955403 25211506 25229830 + 102009136 AGCD01002283;AGCD01002284;AGCD01002285;GBDF01153464;XM_005373501;XM_005373502;XM_013513123;XM_013513131 XP_005373558;XP_005373559;XP_013368577;XP_013368585 MODEL 39132075 snorna SNORD24 Small nucleolar RNA SNORD24 9034120 protein-coding Dbndd1 dysbindin domain containing 1 ASSOCIATED WITH stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955541 3462667 3465769 - 102022015 AGCD01071449;GBDK01196871;GBDK01196872;XM_013507966 XP_013363420 MODEL 8785592 protein-coding Ctbp2 C-terminal binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); nuclear retinoic acid receptor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of retinoic acid receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955477 2922334 3082088 - 102006028 AGCD01055535;AGCD01055536;AGCD01055537;AGCD01055538;GBBH01119744;XM_005401984;XM_005401985;XM_005401986;XM_013503033 XP_005402041;XP_005402042;XP_005402043;XP_013358487 MODEL 8916424 protein-coding Shcbp1l SHC binding and spindle associated 1 like INVOLVED IN positive regulation of chromosome organization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH melanoma (ortholog); prostate cancer (ortholog); stomach cancer (ortholog); FOUND IN meiotic spindle (ortholog) NW_004955406 21754461 21785156 - 102024425 AGCD01006142;AGCD01006143;GBDF01008400;XM_013521488 XP_013376942 MODEL 8774380 protein-coding LOC102005443 keratin-associated protein 20-1-like NW_004955407 30075930 30076100 + 102005443 AGCD01007625;XM_005375636 XP_005375693 MODEL 9041775 protein-coding Thrb thyroid hormone receptor beta ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); cellular response to thyroid hormone stimulus (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); attention deficit hyperactivity disorder (ortholog); breast cancer (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955430 15992146 16322696 - 102011571 AGCD01029630;AGCD01029631;AGCD01029632;AGCD01029633;AGCD01029634;GBDI01296864;XM_005387482;XM_013515651 XP_005387539;XP_013371105 MODEL 8828295 protein-coding Rad51c RAD51 paralog C ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN DNA recombination (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH bilateral breast cancer (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955451 4053195 4178226 - 102017412 AGCD01043089;AGCD01043090;AGCD01043091;AGCD01043092;AGCD01043093;AGCD01043094;AGCD01043095;AGCD01043096;GBDF01190598;XM_005393995;XM_005393996;XM_005393997;XM_013519222;XM_013519223;XR_001235967 XP_005394052;XP_005394053;XP_005394054;XP_013374676;XP_013374677 MODEL 8781413 protein-coding Etfb electron transfer flavoprotein subunit beta ENCODES a protein that exhibits electron transfer activity (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH cervical cancer (ortholog); chronic kidney disease (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN electron transfer flavoprotein complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955558 1032743 1046300 + 102013655 AGCD01073411;AGCD01073412;GBCQ01010793;XM_005412686 XP_005412743 MODEL 8933676 protein-coding Pnpla4 patatin like domain 4, phospholipase and triacylglycerol lipase ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acylglycerol O-acyltransferase activity (ortholog); diolein transacylation activity (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955499 5875706 5925809 - 102018307 AGCD01063532;AGCD01063533;GBCQ01151838;XM_005406541;XM_013505580;XM_013505581 XP_005406598;XP_013361034;XP_013361035 MODEL 10391195 protein-coding LOC106147422 kallikrein-4-like NW_004955558 1567523 1573538 + 106147422 AGCD01073448;XM_013508848 XP_013364302 MODEL 8898874 ncrna LOC102003310 uncharacterized LOC102003310 NW_004955453 2086507 2095184 - 102003310 AGCD01044622;GBDF01223525;XR_001236135;XR_001236136;XR_001236137 MODEL 39134451 misc_rna 7SK 7SK RNA 8797187 pseudo LOC102024009 prefoldin subunit 1 pseudogene NW_004955484 7047221 7048723 - 102024009 AGCD01058306 MODEL 8908191 protein-coding Cacna1i calcium voltage-gated channel subunit alpha1 I ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transport (ortholog); calcium ion transport into cytosol (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Developmental Disabilities (ortholog); hydrocephalus (ortholog) NW_004955413 25440533 25538367 + 102005358 AGCD01014407;AGCD01014408;AGCD01014409;GBDF01237729;XM_005379301 XP_005379358 MODEL 8900877 protein-coding Ect2l epithelial cell transforming 2 like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog) NW_004955436 20754395 20843015 - 102015238 AGCD01034038;AGCD01034039;AGCD01034040;AGCD01034041;GBDF01223049;XM_013516618;XM_013516619;XM_013516620;XM_013516621;XM_013516622;XM_013516623;XM_013516624;XM_013516625;XM_013516626;XM_013516627;XM_013516629;XR_001234967 XP_013372072;XP_013372073;XP_013372074;XP_013372075;XP_013372076;XP_013372077;XP_013372078;XP_013372079;XP_013372080;XP_013372081;XP_013372083 MODEL 9023152 ncrna LOC102025099 uncharacterized LOC102025099 NW_004955411 35546106 35572131 - 102025099 AGCD01012440;XR_259954 MODEL 8911419 protein-coding Fmo5 flavin containing dimethylaniline monoxygenase 5 ENCODES a protein that exhibits monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN regulation of cholesterol metabolic process (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955568 1225136 1247352 + 102016533 AGCD01074543;GBDK01240451;XM_005413472;XM_005413473 XP_005413529;XP_005413530 MODEL 8923815 protein-coding LOC102003667 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7690774 7703651 - 102003667 AGCD01062160;GBDI01129621;XM_013505322;XM_013505323 XP_013360776;XP_013360777 MODEL 9014762 protein-coding Prr15 proline rich 15 NW_004955410 31012402 31016035 + 102016140 AGCD01011313;GBCQ01093607;XM_005377484;XR_001232750;XR_001232751 XP_005377541 MODEL 8754851 protein-coding Akna AT-hook transcription factor INVOLVED IN delamination (ortholog); epithelial to mesenchymal transition (ortholog); neuroblast delamination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); fibrillar center (ortholog) NW_004955419 13218060 13261289 + 102011870 AGCD01019997;AGCD01019998;AGCD01019999;GBBH01060776;GBCE01188222;XM_005382635 XP_005382692 MODEL 9054803 protein-coding Rfc1 replication factor C subunit 1 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN FasL mediated signaling pathway; mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bilateral Vestibulopathy (ortholog); breast cancer (ortholog); FOUND IN DNA replication factor C complex (ortholog); Elg1 RFC-like complex (ortholog); nucleoplasm (ortholog) NW_004955443 7969117 8051734 + 102004016 AGCD01038305;AGCD01038306;AGCD01038307;AGCD01038308;GBBH01228492;GBDF01085359;XM_013518069;XM_013518070 XP_013373523;XP_013373524 MODEL 8756748 protein-coding Ccdc38 coiled-coil domain containing 38 ENCODES a protein that exhibits ubiquitin-modified histone reader activity (ortholog); INVOLVED IN acrosome assembly (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); manchette (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955405 32242811 32285252 - 102006868 AGCD01005331;GBDF01049929;XM_005374488 XP_005374545 MODEL 8997884 protein-coding Lrrc26 leucine rich repeat containing 26 ENCODES a protein that exhibits potassium channel activator activity (ortholog); potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955513 5178631 5180462 - 102005405 AGCD01066961;GBDI01129411;XM_005408584 XP_005408641 MODEL 8704538 protein-coding Pxylp1 2-phosphoxylose phosphatase 1 ENCODES a protein that exhibits phosphatase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); positive regulation of heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955508 4390647 4449782 - 102020038 AGCD01065866;GBDJ01388065;XM_005407772;XM_005407773;XM_013506265;XM_013506266;XM_013506267;XM_013506268;XM_013506269;XM_013506270;XM_013506271;XM_013506272;XM_013506273;XM_013506274;XM_013506275;XM_013506276;XM_013506277 XP_005407829;XP_005407830;XP_013361719;XP_013361720;XP_013361721;XP_013361722;XP_013361723;XP_013361724;XP_013361725;XP_013361726;XP_013361727;XP_013361728;XP_013361729;XP_013361730;XP_013361731 MODEL 39133283 snrna U4 U4 spliceosomal RNA 8920667 pseudo LOC102021947 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955410 10055721 10056207 + 102021947 AGCD01010788 MODEL 8831303 pseudo LOC102009222 C-Myc-binding protein pseudogene NW_004955440 3127945 3130866 - 102009222 AGCD01036236 MODEL 8943156 protein-coding Wnt6 Wnt family member 6 INVOLVED IN axis specification (ortholog); branching involved in ureteric bud morphogenesis (ortholog); epithelial-mesenchymal cell signaling (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) NW_004955453 14547427 14560001 - 102003202 AGCD01044869;AGCD01044870;GBBH01046953;GBDJ01266063;XM_005395621 XP_005395678 MODEL 39131422 protein-coding TAAR2 trace amine associated receptor 2 (gene/pseudogene) 8833242 protein-coding Dsp desmoplakin ENCODES a protein that exhibits protein kinase C binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN adherens junction organization (ortholog); bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH alopecia (ortholog); anhidrosis (ortholog); anxiety disorder (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955465 6356970 6391206 - 102021539 AGCD01050441;GBBH01088064;GBDI01068103;XM_013521834 XP_013377288 MODEL 39133889 misc_rna 7SK 7SK RNA 8789766 protein-coding LOC102006540 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like NW_004955406 38984291 38988524 - 102006540 AGCD01006616;AGCD01006617;GBDF01005693;GBDK01309458;XM_013503363 XP_013358817 MODEL 8794446 protein-coding Colgalt1 collagen beta(1-O)galactosyltransferase 1 ENCODES a protein that exhibits procollagen galactosyltransferase activity (ortholog); INVOLVED IN positive regulation of collagen fibril organization (ortholog); protein O-linked glycosylation via galactose (ortholog); ASSOCIATED WITH brain small vessel disease 3 (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955524 773997 782911 - 102025503 AGCD01068705;AGCD01068706;GBDF01128027;GBDI01019605;XM_013507236 XP_013362690 MODEL 9052895 protein-coding Inhba inhibin subunit beta A ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); androgen metabolic process (ortholog); androst-4-ene-3,17-dione biosynthetic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Brain Hypoxia-Ischemia (ortholog); congestive heart failure (ortholog); FOUND IN activin A complex (ortholog); extracellular region (ortholog); inhibin A complex (ortholog) NW_004955460 2054879 2066628 + 102015383 AGCD01048386;GBDJ01189469;XM_005397723 XP_005397780 MODEL 8900117 protein-coding Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament organization (ortholog); asymmetric neuroblast division (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN Reelin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoskeleton (ortholog) NW_004955545 2149107 2192986 - 102015052 AGCD01071886;AGCD01071887;GBDJ01075928;GBDJ01075942;XM_013508266;XM_013508267 XP_013363720;XP_013363721 MODEL 8987484 protein-coding Slc15a5 solute carrier family 15 member 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955413 12832193 12924836 - 102007323 AGCD01014001;AGCD01014002;AGCD01014003;AGCD01014004;XM_005379024 XP_005379081 MODEL 8977587 protein-coding Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN membrane organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell-cell contact zone (ortholog); clathrin complex (ortholog); vesicle membrane (ortholog) NW_004955413 24406856 24430779 - 102009825 AGCD01014366;AGCD01014367;GBDF01089669;XM_013511544 XP_013366998 MODEL 8764433 protein-coding LOC102012817 histone H2B type 3-B NW_004955581 91596 93803 - 102012817 AGCD01075657;XM_005414232 XP_005414289 MODEL 9052817 protein-coding LOC102012414 cytochrome P450 4B1 ENCODES a protein that exhibits heterocyclic compound binding (ortholog); medium-chain fatty acid omega-1 hydroxylase activity (ortholog); medium-chain fatty acid omega-hydroxylase activity (ortholog); INVOLVED IN biphenyl metabolic process (ortholog); fatty acid oxidation (ortholog); xenobiotic metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); chronic obstructive pulmonary disease (ortholog) NW_004955464 11539467 11556519 - 102012414 AGCD01050155;GBDF01188215;XM_005398649;XM_005398650 XP_005398706;XP_005398707 MODEL 39132692 snorna SNORD28 Small nucleolar RNA SNORD28 8838874 protein-coding LOC102006165 cytochrome c-type heme lyase ENCODES a protein that exhibits heme binding (ortholog); holocytochrome-c synthase activity (ortholog); INVOLVED IN cytochrome c biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrion (ortholog) NW_004955544 2105486 2117830 - 102006165 AGCD01071732;GBCB01062002;XM_005411390 XP_005411447 MODEL 8736827 protein-coding Fmod fibromodulin INVOLVED IN odontogenesis of dentin-containing tooth (ortholog); skin development (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); esophageal cancer (ortholog); gingivitis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955406 39328743 39340113 - 102012279 AGCD01006626;AGCD01006627;GBDI01178831;XM_005375266 XP_005375323 MODEL 8792792 protein-coding Defb128 defensin beta 128 INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); response to wounding (ortholog) NW_004955597 64950 66692 - 102025530 AGCD01076536;GBDF01142541;XM_005414734 XP_005414791 MODEL 8839648 protein-coding Thrsp thyroid hormone responsive ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN regulation of lipid biosynthetic process (ortholog); regulation of triglyceride biosynthetic process (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); attention deficit hyperactivity disorder (ortholog); carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955414 13879095 13883378 - 102006448 AGCD01015123;GBDI01010753;XM_005379823 XP_005379880 MODEL 8750379 protein-coding Chd8 chromodomain helicase DNA binding protein 8 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN brain development (ortholog); chromatin remodeling (ortholog); digestive tract development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); apraxia (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955550 2115649 2175687 - 102010636 AGCD01072611;GBDK01006485;XM_005412107;XM_005412108;XM_005412109;XM_005412110;XM_005412111;XM_005412112;XM_005412113;XM_005412115 XP_005412164;XP_005412165;XP_005412166;XP_005412167;XP_005412168;XP_005412169;XP_005412170;XP_005412172 MODEL 10365421 protein-coding LOC106147423 kallikrein-4-like NW_004955558 2223068 2242462 + 106147423 AGCD01073528;AGCD01073529;AGCD01073530;AGCD01073531;XM_013508852 XP_013364306 MODEL 9033835 protein-coding Rad51d RAD51 paralog D ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); ATP-dependent DNA damage sensor activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); DNA damage response (ortholog); DNA strand invasion (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH breast cancer (ortholog); Chromosome Deletion (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955481 9795102 9810426 - 102011205 AGCD01057117;AGCD01057118;GBDK01318937;XM_005402864;XM_005402867;XM_013503403 XP_005402921;XP_005402924;XP_013358857 MODEL 8864170 ncrna LOC102018592 uncharacterized LOC102018592 NW_004955414 33004937 33019763 + 102018592 AGCD01015794;AGCD01015795;GBCQ01142945;XR_001233135;XR_001233136 MODEL 730469210 snorna SNORA43 Small nucleolar RNA SNORA43 8870362 protein-coding LOC102011176 keratin-associated protein 20-2-like NW_004955407 30259322 30259501 + 102011176 AGCD01007630;XM_005375653 XP_005375710 MODEL 8746211 pseudo LOC102010355 protein tyrosine phosphatase type IVA 1 pseudogene NW_004955414 6560097 6560687 - 102010355 AGCD01014920;XM_005379741;XM_005379742;XM_005379743 MODEL 8769388 pseudo LOC102024011 ubiquitin-conjugating enzyme E2 D3 pseudogene NW_004955484 2154271 2155118 - 102024011 AGCD01058092 MODEL 10062667 ncrna LOC106148517 uncharacterized LOC106148517 NW_004955423 17029342 17031729 + 106148517 AGCD01023843;GBDF01276864;XR_001234048 MODEL 8822029 protein-coding Trpc7 transient receptor potential cation channel subfamily C member 7 ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); manganese ion transport (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); urinary bladder cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955408 31260767 31408852 - 102015178 AGCD01008824;GBDF01075659;XM_013507541 XP_013362995 MODEL 8820373 protein-coding Thsd1 thrombospondin type 1 domain containing 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN focal adhesion assembly (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic aneurysm (ortholog); cervical cancer (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955431 5472209 5495937 + 102010933 AGCD01030033;GBCE01160079;GBDK01230446;XM_005387630 XP_005387687 MODEL 9006063 protein-coding Ptcd2 pentatricopeptide repeat domain 2 INVOLVED IN heart development (ortholog); kidney development (ortholog); liver development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955575 1126978 1156727 + 102004763 AGCD01075233;GBDJ01350323;XM_005413937;XM_005413938;XM_013509609 XP_005413994;XP_005413995;XP_013365063 MODEL 8880184 protein-coding LOC102029710 nuclear envelope pore membrane protein POM 121C NW_004955456 14336122 14380882 - 102029710 AGCD01046639;GBBH01101848;XM_005396787;XM_005396788 XP_005396844;XP_005396845 MODEL 8987495 protein-coding Dbndd2 dysbindin domain containing 2 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); ERK1 and ERK2 cascade (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); lysosome (ortholog) NW_004955445 11931996 11936534 - 102007713 AGCD01039726;AGCD01039727;GBCB01004423;XM_013518316;XM_013518317 XP_013373770;XP_013373771 MODEL 8961829 protein-coding Rxfp1 relaxin family peptide receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cell differentiation (ortholog); ASSOCIATED WITH endometriosis (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog) NW_004955471 8860906 8963016 - 102009710 AGCD01053196;GBDJ01229708;XM_005400936;XM_005400937;XM_005400938;XM_013522859;XM_013522860;XM_013522861 XP_005400993;XP_005400994;XP_005400995;XP_013378313;XP_013378314;XP_013378315 MODEL 8737297 protein-coding LOC102012822 sulfotransferase family cytosolic 2B member 1-like NW_004955804 1914 12609 + 102012822 AGCD01078378;AGCD01078379;GBCE01003625;XM_005415116 XP_005415173 MODEL 39134452 misc_rna 7SK 7SK RNA 8758787 protein-coding Arhgef25 Rho guanine nucleotide exchange factor 25 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN myofibril (ortholog); plasma membrane (ortholog) NW_004955458 5334401 5341485 + 102007861 AGCD01047476;AGCD01047477;GBCB01111403;XM_005397403 XP_005397460 MODEL 9005211 protein-coding LOC102003313 chromosome unknown open reading frame, human C1orf21 ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955406 23126976 23257616 + 102003313 AGCD01006165;AGCD01006166;AGCD01006167;AGCD01006168;GBCQ01126238;XM_005375052;XM_005375054;XM_013521592 XP_005375109;XP_005375111;XP_013377046 MODEL 39131802 rrna 5S_rRNA 5S ribosomal RNA 39133285 snrna U4 U4 spliceosomal RNA 8766178 ncrna LOC102005085 uncharacterized LOC102005085 NW_004955442 14237107 14240594 + 102005085 AGCD01037806;GBDF01150434;XR_001235364;XR_262140 MODEL 8879679 protein-coding LOC102018593 short transient receptor potential channel 2-like NW_004955414 19424090 19460149 + 102018593 AGCD01015315;AGCD01015316;AGCD01015317;AGCD01081640;GBDF01086082;XM_013511714 XP_013367168 MODEL 8830199 pseudo LOC102024014 arginine--tRNA ligase, cytoplasmic pseudogene NW_004955421 2200401 2202377 - 102024014 AGCD01021620 MODEL 8916256 protein-coding Eda ectodysplasin A ENCODES a protein that exhibits cytokine activity (ortholog); death receptor agonist activity (ortholog); death receptor binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); cytokine-mediated signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH anodontia (ortholog); Arthralgia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) NW_004955475 9177911 9592150 + 102017331 AGCD01055059;AGCD01055060;AGCD01055061;AGCD01055062;AGCD01055063;AGCD01055064;AGCD01055065;AGCD01055066;AGCD01055067;AGCD01055068;GBBH01162077;XM_005401598;XM_005401599;XM_005401600;XM_005401601;XM_005401602 XP_005401655;XP_005401656;XP_005401657;XP_005401658;XP_005401659 MODEL 8840509 protein-coding Colgalt2 collagen beta(1-O)galactosyltransferase 2 INVOLVED IN cell population proliferation (ortholog); gene expression (ortholog); T cell apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 22674692 22775079 - 102029263 AGCD01006160;AGCD01006161;GBCE01181738;XM_005375048;XM_005375049 XP_005375105;XP_005375106 MODEL 8826553 protein-coding Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ENCODES a protein that exhibits kinase binding (ortholog); mRNA binding (ortholog); nuclear export signal receptor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); mRNA stabilization (ortholog); negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955455 5612087 5660543 - 102009460 AGCD01045743;AGCD01045744;AGCD01045745;AGCD01045746;GBDK01183925;XM_005396313;XM_005396314;XM_005396315;XM_005396316 XP_005396370;XP_005396371;XP_005396372;XP_005396373 MODEL 39132559 rrna 5S_rRNA 5S ribosomal RNA 8773874 pseudo LOC102005444 zinc finger protein 649-like NW_004955408 34633994 34635786 + 102005444 AGCD01008914 MODEL 8928511 protein-coding Baiap3 BAI1 associated protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); phospholipid binding (ortholog); SNARE binding (ortholog); INVOLVED IN dense core granule maturation (ortholog); G protein-coupled receptor signaling pathway (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); dense core granule (ortholog); early endosome membrane (ortholog) NW_004955442 15884034 15897894 - 102006961 AGCD01037884;GBDI01166935;XM_005391574;XM_013517830 XP_005391631;XP_013373284 MODEL 8707178 protein-coding Slc16a1 solute carrier family 16 member 1 ENCODES a protein that exhibits carboxylic acid transmembrane transporter activity (ortholog); identical protein binding (ortholog); lactate transmembrane transporter activity (ortholog); INVOLVED IN behavioral response to nutrient (ortholog); carboxylic acid transmembrane transport (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955435 16334382 16361737 - 102007930 AGCD01033319;GBDF01006604;XM_005388972;XM_005388973;XM_005388975 XP_005389029;XP_005389030;XP_005389032 MODEL 9034303 protein-coding Ppcdc phosphopantothenoylcysteine decarboxylase ENCODES a protein that exhibits FMN binding (ortholog); identical protein binding (ortholog); phosphopantothenoylcysteine decarboxylase activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN phosphopantothenoylcysteine decarboxylase complex (ortholog) NW_004955450 2971874 2985034 - 102003923 AGCD01042416;GBDF01014837;XM_005393522;XM_005393523;XM_005393524;XM_013518850;XM_013518851;XM_013518852;XM_013518853;XM_013518854;XM_013518855;XR_001235857;XR_262523 XP_005393579;XP_005393580;XP_005393581;XP_013374304;XP_013374305;XP_013374306;XP_013374307;XP_013374308;XP_013374309 MODEL 8939945 protein-coding Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN negative regulation of fatty acid beta-oxidation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955411 35999583 36025805 + 102028280 AGCD01012462;AGCD01012463;GBBH01053291;XM_005377897;XM_005377898;XM_005377899;XM_005377900;XR_001232832 XP_005377954;XP_005377955;XP_005377956;XP_005377957 MODEL 39133603 snorna SNORD29 Small nucleolar RNA SNORD29 8728534 protein-coding Rfc2 replication factor C subunit 2 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); nucleoplasm (ortholog) NW_004955456 13659122 13671405 + 102018895 AGCD01046609;AGCD01046610;GBDK01239240;XM_005396752;XM_013520619 XP_005396809;XP_013376073 MODEL 8994895 ncrna LOC102007675 uncharacterized LOC102007675 NW_004955425 7720216 7730019 + 102007675 AGCD01025391;AGCD01025392;GBDK01047433;XR_261136 MODEL 8884805 protein-coding Ccdc39 coiled-coil domain 39 molecular ruler complex subunit INVOLVED IN axonemal dynein complex assembly (ortholog); brain development (ortholog); central nervous system myelination (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); atopic dermatitis (ortholog); autism spectrum disorder (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955420 9689076 9727806 - 102017987 AGCD01020761;GBBH01164498;XM_005383062 XP_005383119 MODEL 8813836 ncrna LOC102021950 uncharacterized LOC102021950 NW_004955464 6997967 7031483 + 102021950 AGCD01050051;AGCD01050052;AGCD01050053;GBDJ01111080;XR_001236684;XR_001236685;XR_263208 MODEL 8976284 protein-coding Fmr1 Fragile X messenger ribonucleoprotein 1 ENCODES a protein that exhibits chromatin binding (ortholog); dynein complex binding (ortholog); G-quadruplex RNA binding (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); cellular response to potassium ion (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); Cajal body (ortholog) NW_004955498 566741 594837 + 102017998 AGCD01062722;AGCD01062723;GBBH01150636;GBCC01033779;XM_005406383 XP_005406440 MODEL 9019199 protein-coding Dspp dentin sialophosphoprotein ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); biomineral tissue development (ortholog); ASSOCIATED WITH Autosomal Dominant Deafness 39 with Dentinogenesis Imperfecta 1 (ortholog); dentin dysplasia (ortholog); dentin dysplasia type II (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955474 2254842 2259303 - 102029177 AGCD01054286;AGCD01054287;XM_005401458 XP_005401515 MODEL 9026129 protein-coding LOC102009223 cytochrome P450 1B1 ENCODES a protein that exhibits estrogen 16-alpha-hydroxylase activity (ortholog); estrogen 2-hydroxylase activity (ortholog); heme binding (ortholog); INVOLVED IN adrenal gland development (ortholog); angiogenesis (ortholog); arachidonate metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); adenoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) NW_004955441 5803397 5812131 - 102009223 AGCD01036887;GBDF01179111;XM_005390882;XM_013517545 XP_005390939;XP_013372999 MODEL 8778210 protein-coding Cacna1s calcium voltage-gated channel subunit alpha1 S ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); molecular function activator activity (ortholog); small molecule binding (ortholog); INVOLVED IN calcium ion transport (ortholog); endoplasmic reticulum organization (ortholog); extraocular skeletal muscle development (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine head (ortholog); I band (ortholog) NW_004955406 37201180 37263328 - 102009684 AGCD01006572;GBCE01169715;XM_005375160;XM_013522110 XP_005375217;XP_013377564 MODEL 8771358 pseudo LOC102006542 insulin-like growth factor 2 mRNA-binding protein 2 NW_004955407 20470335 20479986 - 102006542 AGCD01007330 MODEL 8769339 protein-coding Taar5 trace amine associated receptor 5 ENCODES a protein that exhibits trace-amine receptor activity (ortholog); trimethylamine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cognition (ortholog); sensory perception of chemical stimulus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955436 13152345 13153358 - 102023071 AGCD01033854;XM_005389213 XP_005389270 MODEL 9011754 protein-coding Arhgef26 Rho guanine nucleotide exchange factor 26 INVOLVED IN endothelial cell morphogenesis (ortholog); ruffle assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955448 5494571 5627107 + 102012141 AGCD01041371;AGCD01041372;AGCD01041373;GBDJ01273015;GBDK01021149;XM_005393056;XM_005393057 XP_005393113;XP_005393114 MODEL 730469272 snorna SNORA44 Small nucleolar RNA SNORA44 8991410 pseudo LOC102003668 uncharacterized LOC102003668 NW_004955423 22908358 22973034 - 102003668 AGCD01023981;AGCD01023982;AGCD01023983;AGCD01023984;AGCD01023985;AGCD01023986 MODEL 9046449 protein-coding Ctbs chitobiase ENCODES a protein that exhibits chitinase activity (ortholog); hydrolase activity, acting on glycosyl bonds (ortholog); INVOLVED IN carbohydrate catabolic process (ortholog); chitin catabolic process (ortholog); oligosaccharide catabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN lysosome (ortholog) NW_004955423 9327945 9343923 + 102030437 AGCD01023657;GBDJ01274029;XM_005385159 XP_005385216 MODEL 9025655 protein-coding Inhbb inhibin subunit beta B ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); cellular response to calcium ion (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH Brain Death (ortholog); congenital hypothyroidism (ortholog); familial male-limited precocious puberty (ortholog); FOUND IN cell periphery (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955459 9482998 9488489 - 102008066 AGCD01048158;GBCE01049899;GBDK01360992;XM_013521093 XP_013376547 MODEL 8837814 protein-coding Aknad1 AKNA domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog) NW_004955435 12275079 12314424 - 102025504 AGCD01033139;GBDF01003157;XM_013516539;XM_013516540 XP_013371993;XP_013371994 MODEL 8849034 pseudo LOC102012421 5-azacytidine-induced protein 2 pseudogene NW_004955414 22550353 22553184 + 102012421 AGCD01015461 MODEL 8860435 protein-coding Defb129 defensin beta 129 NW_004955597 116468 119192 + 102025861 AGCD01076541;XM_005414735 XP_005414792 MODEL 8765235 protein-coding Dbnl drebrin like ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament severing (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955456 7912827 7924373 - 102024530 AGCD01046435;GBDF01153971;XM_005396684 XP_005396741 MODEL 9000478 protein-coding Lrrc27 leucine rich repeat containing 27 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955477 9970199 10005562 + 102024797 AGCD01055688;GBDF01045980;XM_005402041;XM_013503095;XM_013503096;XM_013503097;XM_013503098;XM_013503099;XM_013503100 XP_005402098;XP_013358549;XP_013358550;XP_013358551;XP_013358552;XP_013358553;XP_013358554 MODEL 39134453 misc_rna 7SK 7SK RNA 8843675 protein-coding Wnt7a Wnt family member 7A ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); asymmetric protein localization involved in cell fate determination (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955429 12647993 12693998 + 102004623 AGCD01028728;GBDJ01171100;XM_005386976 XP_005387033 MODEL 39131727 snorna SNORD30 Small nucleolar RNA SNORD30 8724212 protein-coding Chd9 chromodomain helicase DNA binding protein 9 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN chromatin organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955433 10900771 11161161 + 102024041 AGCD01031639;AGCD01031640;AGCD01031641;AGCD01031642;AGCD01031643;AGCD01031644;AGCD01031645;AGCD01031646;AGCD01031647;AGCD01031648;AGCD01031649;GBCE01009599;XM_005388286;XM_005388287;XM_005388293;XM_005388294;XM_013516196;XM_013516197;XM_013516198;XM_013516199;XM_013516200;XM_013516201 XP_005388343;XP_005388344;XP_005388350;XP_005388351;XP_013371650;XP_013371651;XP_013371652;XP_013371653;XP_013371654;XP_013371655 MODEL 8806175 protein-coding LOC102025102 uncharacterized LOC102025102 NW_004955466 10805473 10806476 + 102025102 AGCD01051077;GBDF01213392;XM_005399201 XP_005399258 MODEL 8771073 protein-coding Rad52 RAD52 DNA repair protein ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA recombination (ortholog); ASSOCIATED WITH adrenocortical carcinoma (ortholog); Breast Cancer, Familial (ortholog); colon cancer (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) NW_004955454 6206195 6227859 + 102011082 AGCD01045225;GBDI01263386;XM_005396004;XM_005396005;XM_005396006;XM_005396007;XM_005396008;XM_005396009;XM_013520158;XM_013520160;XM_013520161 XP_005396061;XP_005396062;XP_005396063;XP_005396064;XP_005396065;XP_005396066;XP_013375612;XP_013375614;XP_013375615 MODEL 8998006 ncrna LOC102011177 uncharacterized LOC102011177 NW_004955408 10359375 10380970 - 102011177 AGCD01008267;AGCD01008268;GBDF01237961;XR_259677 MODEL 10190939 protein-coding LOC102010356 uncharacterized LOC102010356 NW_004955470 374789 391272 - 102010356 AGCD01052609;GBCE01002380;XM_013522686 XP_013378140 MODEL 8867395 protein-coding Pnpla5 patatin like domain 5, triacylglycerol lipase ENCODES a protein that exhibits triacylglycerol lipase activity (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955413 28825673 28835476 - 102019159 AGCD01014568;GBDJ01219176;XM_005379447;XM_005379449 XP_005379504;XP_005379506 MODEL 8971068 protein-coding Ptcd3 pentatricopeptide repeat domain 3 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955424 1480934 1507621 - 102020581 AGCD01024237;GBDI01127765;XM_005385406;XM_013514671;XM_013514672 XP_005385463;XP_013370125;XP_013370126 MODEL 8733791 protein-coding Trpm1 transient receptor potential cation channel subfamily M member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); cellular response to light stimulus (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1C (ortholog); Ependymomas (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955416 29846374 29880922 - 102017234 AGCD01017668;XM_013512689 XP_013368143 MODEL 8706896 protein-coding Pycr1 pyrroline-5-carboxylate reductase 1 ENCODES a protein that exhibits identical protein binding (ortholog); pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); L-glutamate catabolic process (ortholog); L-glutamine catabolic process (ortholog); ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); Agenesis of Corpus Callosum (ortholog); anxiety disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); pyrroline-5-carboxylate reductase complex (ortholog) NW_004955506 1231874 1236550 + 102023056 AGCD01065251;GBCB01119841;XM_005407242;XM_005407244;XM_013506062;XM_013506063 XP_005407299;XP_005407301;XP_013361516;XP_013361517 MODEL 8705121 protein-coding LOC102012823 inositol-3-phosphate synthase 1-like NW_004958180 30 610 + 102012823 AGCD01081576;GBBH01061916;XM_005415238 XP_005415295 MODEL 8856231 protein-coding Rxfp2 relaxin family peptide receptor 2 ENCODES a protein that exhibits peptide hormone binding (ortholog); protein-hormone receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); male gonad development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cryptorchidism (ortholog); disorder of sexual development (ortholog); FOUND IN plasma membrane (ortholog) NW_004955431 14050537 14105852 - 102016505 AGCD01030318;AGCD01030319;GBDF01231821;XM_013515731 XP_013371185 MODEL 39133890 misc_rna 7SK 7SK RNA 39131803 rrna 5S_rRNA 5S ribosomal RNA 8852141 protein-coding Slc16a10 solute carrier family 16 member 10 ENCODES a protein that exhibits aromatic amino acid transmembrane transporter activity (ortholog); L-phenylalanine transmembrane transporter activity (ortholog); L-tryptophan transmembrane transporter activity (ortholog); INVOLVED IN aromatic amino acid transport (ortholog); thyroid hormone generation (ortholog); thyroid hormone transport (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); plasma membrane (ortholog) NW_004955411 35758612 35871179 + 102025888 AGCD01012457;GBCB01059371;XM_013510862;XM_013510863;XM_013510864;XM_013510865;XR_001232837;XR_001232838 XP_013366316;XP_013366317;XP_013366318;XP_013366319 MODEL 39133287 snrna U4 U4 spliceosomal RNA 8701648 protein-coding Rfc3 replication factor C subunit 3 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA binding (ortholog); DNA clamp loader activity (ortholog); INVOLVED IN DNA replication (ortholog); DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); nucleoplasm (ortholog) NW_004955431 12071465 12084570 - 102007456 AGCD01030254;GBCB01075231;XM_005387702 XP_005387759 MODEL 8860106 protein-coding Shd Src homology 2 domain containing transforming protein D ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955495 4579252 4587192 - 102010816 AGCD01061934;AGCD01061935;GBBH01135216;XM_005405804 XP_005405861 MODEL 8814128 protein-coding LOC102005087 protein phosphatase 1 regulatory subunit 37 NW_004955555 2117438 2165515 + 102005087 AGCD01073130;AGCD01073131;GBBH01124509;XM_005412493;XM_013508759 XP_005412550;XP_013364213 MODEL 8964142 ncrna LOC102009224 uncharacterized LOC102009224 NW_004955441 12505345 12519740 + 102009224 AGCD01037123;GBDF01308251;XR_262074 MODEL 8881468 protein-coding LOC102018604 neutrophil gelatinase-associated lipocalin-like NW_004955419 330399 334636 - 102018604 AGCD01019576;XM_013513093 XP_013368547 MODEL 8722193 protein-coding Dst dystonin ENCODES a protein that exhibits integrin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell motility (ortholog); cytoplasmic microtubule organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cell leading edge (ortholog) NW_004955502 3175918 3610823 + 102027880 AGCD01064312;AGCD01064313;AGCD01064314;AGCD01064315;AGCD01064316;AGCD01064317;GBDF01287480;XM_005406890;XM_005406892;XM_005406893;XM_013505819;XM_013505820;XM_013505821;XM_013505822;XM_013505823 XP_005406947;XP_005406949;XP_005406950;XP_013361273;XP_013361274;XP_013361275;XP_013361276;XP_013361277 MODEL 8870118 ncrna LOC102029721 uncharacterized LOC102029721 NW_004955410 11442219 11445476 + 102029721 AGCD01010824;GBDF01262275;XR_259835 MODEL 8868605 pseudo LOC102006168 40S ribosomal protein S2 pseudogene NW_004955442 9115157 9116092 + 102006168 AGCD01037662 MODEL 8917295 protein-coding Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity involved in bundle of His cell action potential (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brain infarction (ortholog); breast carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); L-type voltage-gated calcium channel complex (ortholog) NW_004955410 3544398 3963582 + 102003216 AGCD01010651;AGCD01010652;AGCD01010653;AGCD01010654;AGCD01010655;AGCD01010656;GBDI01170091;XM_005377191;XM_013510508;XM_013510509;XM_013510510 XP_005377248;XP_013365962;XP_013365963;XP_013365964 MODEL 730469438 snorna SNORA44 Small nucleolar RNA SNORA44 8987674 protein-coding Eda2r ectodysplasin A2 receptor ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955475 6080153 6143339 - 102011535 AGCD01054950;AGCD01054951;AGCD01054952;GBDK01000096;XM_005401579;XM_013502891;XM_013502892;XM_013502894 XP_005401636;XP_013358345;XP_013358346;XP_013358348 MODEL 8983699 protein-coding Arhgef28 Rho guanine nucleotide exchange factor 28 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN central nervous system neuron axonogenesis (ortholog); neurofilament cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955425 26690863 26987900 - 102005278 AGCD01025951;AGCD01025952;AGCD01025953;AGCD01025954;AGCD01025955;AGCD01025956;AGCD01025957;GBBH01089639;GBDI01179840;XM_005386067 XP_005386124 MODEL 8705338 protein-coding Ctc1 CST telomere replication complex component 1 ENCODES a protein that exhibits G-rich strand telomeric DNA binding (ortholog); single-stranded DNA binding (ortholog); telomeric repeat DNA binding (ortholog); INVOLVED IN bone marrow development (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); brain disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); CST complex (ortholog); nucleoplasm (ortholog) NW_004955467 8673069 8700730 + 102021327 AGCD01051466;GBDJ01339470;XM_005399422;XM_005399423;XM_005399425 XP_005399479;XP_005399480;XP_005399482 MODEL 9032398 ncrna LOC102012422 uncharacterized LOC102012422 NW_004955474 1783853 1789261 + 102012422 AGCD01054268;GBDK01242651;XR_263587 MODEL 9024948 protein-coding Ppcs phosphopantothenoylcysteine synthetase ENCODES a protein that exhibits identical protein binding (ortholog); phosphopantothenate--cysteine ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); coenzyme A biosynthetic process (ortholog); heart process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway; ASSOCIATED WITH dilated cardiomyopathy 2C (ortholog); FOUND IN catalytic complex (ortholog) NW_004955537 2080865 2084199 + 102013336 AGCD01070917;GBDK01187161;XM_005410610;XM_005410611;XM_013507766 XP_005410667;XP_005410668;XP_013363220 MODEL 10149400 pseudo LOC106147424 60S ribosomal protein L21 pseudogene NW_004955408 13204104 13206419 - 106147424 AGCD01008350 MODEL 8919476 pseudo LOC102003314 40S ribosomal protein S17 pseudogene NW_004955406 36161717 36162486 - 102003314 AGCD01006543 MODEL 8983502 protein-coding Inhbc inhibin subunit beta C ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog) NW_004955458 5148923 5173136 + 102027615 AGCD01047461;AGCD01047462;AGCD01047463;AGCD01047464;AGCD01047465;AGCD01047466;AGCD01047467;GBDF01268750;XM_005397372 XP_005397429 MODEL 9017579 protein-coding Bak1 BCL2 antagonist/killer 1 ENCODES a protein that exhibits BH domain binding (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); apoptotic process (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); ataxia telangiectasia (ortholog); FOUND IN BAK complex (ortholog); Bcl-2 family protein complex (ortholog); cytoplasm (ortholog) NW_004955437 2036415 2041997 - 102008887 AGCD01034255;GBBH01062496;XM_005389504;XM_005389505 XP_005389561;XP_005389562 MODEL 8750991 pseudo LOC102007677 40S ribosomal protein S3a pseudogene NW_004955426 13259846 13261749 + 102007677 AGCD01026360 MODEL 10291915 protein-coding Defb134 defensin beta 134 ASSOCIATED WITH thoracic aortic aneurysm (ortholog) NW_004955403 53215271 53221539 - 106148664 AGCD01003043;AGCD01003044;AGCD01003045;XM_013514937 XP_013370391 MODEL 9039994 protein-coding Fmr1nb FMR1 neighbor ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955498 611443 643011 + 102020264 AGCD01062723;AGCD01062724;GBDF01085541;XM_005406393 XP_005406450 MODEL 8951104 ncrna LOC102024026 uncharacterized LOC102024026 NW_004955498 3548837 3565146 - 102024026 AGCD01062905;AGCD01062906;GBDF01286420;XR_264214 MODEL 8809006 protein-coding LOC102006544 cytochrome b-c1 complex subunit 8 INVOLVED IN cerebellar Purkinje cell layer development (ortholog); hippocampus development (ortholog); hypothalamus development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955408 4240072 4241342 + 102006544 AGCD01008099;GBDF01003550;XM_005376118;XM_005376119 XP_005376175;XP_005376176 MODEL 8894317 protein-coding Lrrc28 leucine rich repeat containing 28 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955416 26668712 26786945 + 102004277 AGCD01017602;AGCD01017603;AGCD01017604;AGCD01017605;GBDF01002081;XM_005381627;XM_005381628;XM_013512542 XP_005381684;XP_005381685;XP_013367996 MODEL 8894285 protein-coding Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 ENCODES a protein that exhibits kinase activator activity (ortholog); MAP kinase kinase kinase activity (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN aorta development (ortholog); canonical NF-kappaB signal transduction (ortholog); cardiac septum development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 25290733 25315267 + 102029384 AGCD01014401;GBDK01062559;XM_005379290 XP_005379347 MODEL 8792298 ncrna LOC102003669 uncharacterized LOC102003669 NW_004955497 6927114 6931241 + 102003669 AGCD01062651;GBDF01281346;XR_264207;XR_264208 MODEL 8813197 protein-coding Rad54b RAD54 homolog B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); DNA translocase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); site of double-strand break (ortholog) NW_004955417 10598295 10685999 - 102026004 AGCD01018081;AGCD01018082;AGCD01018083;AGCD01018084;AGCD01018085;AGCD01018086;GBCQ01115191;XM_013512842 XP_013368296 MODEL 8900724 protein-coding Colq collagen like tail subunit of asymmetric acetylcholinesterase ENCODES a protein that exhibits heparin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); negative regulation of synaptic transmission, cholinergic (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN neuromuscular junction (ortholog); synapse (ortholog) NW_004955430 1956833 2019581 - 102012349 AGCD01029144;AGCD01029145;GBCE01037452;XM_005387306;XM_013515712 XP_005387363;XP_013371166 MODEL 39132562 rrna 5S_rRNA 5S ribosomal RNA 8710396 pseudo LOC102005447 rho-associated protein kinase 1-like NW_004955459 1724049 1732649 + 102005447 AGCD01047977 MODEL 8974936 protein-coding Eif4g1 eukaryotic translation initiation factor 4 gamma 1 ENCODES a protein that exhibits ATP binding (ortholog); eukaryotic initiation factor 4E binding (ortholog); mRNA binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to nutrient levels (ortholog); energy homeostasis (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955420 23161541 23179788 - 102020675 AGCD01021230;AGCD01021231;GBBH01061725;GBDJ01083746;XM_013513357 XP_013368811 MODEL 9015824 protein-coding Etfdh electron transfer flavoprotein dehydrogenase ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); electron transfer activity (ortholog); electron-transferring-flavoprotein dehydrogenase activity (ortholog); INVOLVED IN electron transport chain (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); response to oxidative stress (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955471 12282601 12308792 + 102018591 AGCD01053282;AGCD01053283;AGCD01053284;AGCD01053285;GBBH01142163;GBDF01124988;XM_005400964 XP_005401021 MODEL 8762701 protein-coding Ptch1 patched 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cyclin binding (ortholog); hedgehog family protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN apical part of cell (ortholog); axonal growth cone (ortholog); caveola (ortholog) NW_004955422 22362330 22418062 - 102005945 AGCD01023158;GBCE01185669;GBDF01209723;XM_013514312 XP_013369766 MODEL 8718414 protein-coding Thsd4 thrombospondin type 1 domain containing 4 INVOLVED IN elastic fiber assembly (ortholog); microfibril assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); microfibril (ortholog) NW_004955450 5296670 5827252 - 102009131 AGCD01042499;AGCD01042500;AGCD01042501;AGCD01042502;AGCD01042503;AGCD01042504;AGCD01042505;AGCD01042506;AGCD01042507;AGCD01042508;AGCD01042509;AGCD01042510;GBBH01142626;GBCQ01066873;XM_013518949 XP_013374403 MODEL 8811959 protein-coding Edar ectodysplasin A receptor ENCODES a protein that exhibits signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia (ortholog); ectodermal dysplasia 10A (ortholog); FOUND IN apical part of cell (ortholog); plasma membrane (ortholog) NW_004955470 12310680 12362555 - 102011109 AGCD01052926;AGCD01052927;GBDI01338416;XM_005400813 XP_005400870 MODEL 8894559 protein-coding Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); muscle cell development (ortholog); neuromuscular junction development (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynaptic active zone membrane (ortholog); voltage-gated calcium channel complex (ortholog) NW_004955532 2163529 2283509 - 102007694 AGCD01070221;AGCD01070222;GBDI01289999;XM_005410276;XM_005410278;XM_005410279;XM_005410280;XM_005410281;XM_005410282;XM_005410283;XM_005410284;XM_013507588;XM_013507589;XM_013507590;XM_013507591 XP_005410333;XP_005410335;XP_005410336;XP_005410337;XP_005410338;XP_005410339;XP_005410340;XP_005410341;XP_013363042;XP_013363043;XP_013363044;XP_013363045 MODEL 10291910 ncrna LOC106148518 uncharacterized LOC106148518 NW_004955423 21388631 21393578 - 106148518 AGCD01023942;GBDF01180411;XR_001234049 MODEL 9001903 pseudo LOC102021951 39S ribosomal protein L47, mitochondrial pseudogene NW_004955464 13716913 13717742 + 102021951 AGCD01050291 MODEL 9055370 protein-coding Ccdc40 coiled-coil domain 40 molecular ruler complex subunit INVOLVED IN axonemal dynein complex assembly (ortholog); axoneme assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955506 2783837 2840248 - 102023827 AGCD01065301;GBCE01084843;XM_005407506;XM_013505994 XP_005407563;XP_013361448 MODEL 39134454 misc_rna 7SK 7SK RNA 8837438 protein-coding Dbp D-box binding PAR bZIP transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN liver development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) NW_004955559 1915424 1921322 + 102007061 AGCD01073681;AGCD01073682;GBBH01002125;GBDI01015879;XM_013508997 XP_013364451 MODEL 39133891 misc_rna 7SK 7SK RNA 39131804 rrna 5S_rRNA 5S ribosomal RNA 8942984 ncrna LOC102011178 uncharacterized LOC102011178 NW_004955457 13088413 13091964 + 102011178 AGCD01047037;GBBH01088650;XR_262949 MODEL 39133289 snrna U4 U4 spliceosomal RNA 8868835 protein-coding She Src homology 2 domain containing E ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955545 989390 1011100 - 102012248 AGCD01071830;AGCD01071831;GBDF01178649;GBDF01192726;XM_005411520 XP_005411577 MODEL 9044868 protein-coding Pnpla6 patatin like domain 6, lysophospholipase ENCODES a protein that exhibits B-type glycerophospholipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Ataxia (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955563 1681112 1703287 - 102030676 AGCD01074156;AGCD01074157;GBDJ01081263;XM_005413181;XM_005413182;XM_005413184;XM_005413185 XP_005413238;XP_005413239;XP_005413241;XP_005413242 MODEL 9030955 pseudo LOC102029723 forkhead box protein M1 pseudogene NW_004955463 3787182 3789475 - 102029723 AGCD01049593 MODEL 8873342 protein-coding Trpm2 transient receptor potential cation channel subfamily M member 2 ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); calcium ion binding (ortholog); hydrolase activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); lysosomal membrane (ortholog) NW_004955407 41062217 41110500 - 102025656 AGCD01007854;AGCD01007855;GBBH01060494;GBBH01060499;XM_005375860;XM_005375861;XM_013505319;XM_013505324;XM_013505330;XM_013505335 XP_005375917;XP_005375918;XP_013360773;XP_013360778;XP_013360784;XP_013360789 MODEL 8762189 protein-coding LOC102012824 cytochrome c oxidase subunit 6B1-like NW_004955452 216986 217314 - 102012824 AGCD01043804;XM_005394661 XP_005394718 MODEL 39131977 snorna SNORD31 Small nucleolar RNA SNORD31 8958372 protein-coding Chdh choline dehydrogenase ENCODES a protein that exhibits choline dehydrogenase activity (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); congestive heart failure (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955430 3797924 3831326 - 102003678 AGCD01029223;AGCD01029224;AGCD01029225;AGCD01029226;AGCD01029227;GBBH01089524;GBDJ01406665;XM_013515612 XP_013371066 MODEL 9029664 protein-coding Bambi BMP and activin membrane bound inhibitor ENCODES a protein that exhibits frizzled binding (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of osteoblast differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic valve stenosis (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955429 21024396 21025890 + 102026898 AGCD01028996;GBBH01187263;GBCQ01093600;XM_013515562 XP_013371016 MODEL 8852551 protein-coding Slc16a11 solute carrier family 16 member 11 ENCODES a protein that exhibits pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955467 9891909 9894192 + 102007209 AGCD01051535;GBDF01184767;XM_005399574;XM_005399575;XM_005399576 XP_005399631;XP_005399632;XP_005399633 MODEL 9031136 protein-coding LOC102010358 olfactory receptor 52H1-like NW_004955414 21638413 21639375 + 102010358 AGCD01015425;XM_005380101 XP_005380158 MODEL 8705061 ncrna LOC102009225 uncharacterized LOC102009225 NW_004955549 375942 379270 + 102009225 AGCD01072423;GBDF01288013;XR_264913 MODEL 10351430 ncrna LOC106148519 uncharacterized LOC106148519 NW_004955423 10060674 10091430 + 106148519 AGCD01023668;AGCD01023669;GBCE01058302;XR_001234050 MODEL 8829035 protein-coding LOC102018607 probable ATP-dependent RNA helicase DDX5 NW_004955420 170507 219822 - 102018607 AGCD01020535;AGCD01020536;AGCD01020537;AGCD01020538;GBBH01074208;XM_013513565;XR_001233769;XR_001233770;XR_001233771;XR_001233772;XR_001233773 XP_013369019 MODEL 8867093 pseudo LOC102006547 lupus La protein pseudogene NW_004955458 8690267 8691504 + 102006547 AGCD01047620 MODEL 39133292 snrna U4 U4 spliceosomal RNA 8950512 protein-coding Akr1a1 aldo-keto reductase family 1 member A1 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); aldose reductase (NADPH) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN aldehyde catabolic process (ortholog); cellular detoxification of aldehyde (ortholog); D-glucuronate catabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; prostaglandin biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); synapse (ortholog) NW_004955464 12715238 12729034 - 102028510 AGCD01050220;AGCD01050221;GBCQ01009224;XM_005398702;XM_013521760 XP_005398759;XP_013377214 MODEL 730469175 snorna SNORA44 Small nucleolar RNA SNORA44 8727567 protein-coding Tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); molecular adaptor activity (ortholog); zinc ion binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); heart development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955439 11826469 11903103 - 102014175 AGCD01035924;AGCD01035925;GBCB01022887;XM_005390614;XM_005390615;XM_005390616;XM_013517374;XM_013517375;XM_013517376 XP_005390671;XP_005390672;XP_005390673;XP_013372828;XP_013372829;XP_013372830 MODEL 9053481 ncrna LOC102012424 uncharacterized LOC102012424 NW_004955415 32886303 32889353 - 102012424 AGCD01016738;GBDI01281650;XR_260333 MODEL 8810495 protein-coding Arhgef3 Rho guanine nucleotide exchange factor 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955430 6515949 6837997 - 102011569 AGCD01029303;AGCD01029304;AGCD01029305;AGCD01029306;AGCD01029307;AGCD01029308;AGCD01029309;AGCD01029310;AGCD01029311;AGCD01029312;AGCD01029313;AGCD01029314;AGCD01029315;AGCD01029316;GBBH01102437;GBCB01001908;XM_013515653 XP_013371107 MODEL 8704636 protein-coding Shf Src homology 2 domain containing F PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955409 8219295 8227877 + 102021316 AGCD01009387;GBDJ01390482;XM_013510314;XM_013510315 XP_013365768;XP_013365769 MODEL 9051895 protein-coding Pycr2 pyrroline-5-carboxylate reductase 2 ENCODES a protein that exhibits pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); L-glutamate catabolic process (ortholog); L-glutamine catabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955489 138600 143112 - 102008736 AGCD01059778;GBBH01031760;GBDJ01018987;XM_005404488 XP_005404545 MODEL 10334402 ncrna LOC106147425 uncharacterized LOC106147425 NW_004955558 788014 790469 - 106147425 AGCD01073390;GBCE01126974;XR_001232324;XR_001232325 MODEL 8963002 protein-coding Inhbe inhibin subunit beta E ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN negative regulation of adipose tissue development (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); lipid storage disease (ortholog) NW_004955458 5177036 5179095 + 102027947 AGCD01047467;XM_005397373 XP_005397430 MODEL 8984404 protein-coding Wnt7b Wnt family member 7B ENCODES a protein that exhibits chemoattractant activity involved in axon guidance (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN anatomical structure regression (ortholog); angiogenesis (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH breast cancer (ortholog); breast fibroadenoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955413 30146185 30185693 - 102005922 AGCD01014601;AGCD01014602;GBBH01026258;GBCE01031612;XM_013511611;XM_013511613 XP_013367065;XP_013367067 MODEL 9040946 ncrna LOC102007678 uncharacterized LOC102007678 NW_004955427 4628626 4654041 - 102007678 AGCD01026970;AGCD01026971;GBDF01253448;XR_261233 MODEL 9046492 ncrna LOC102005088 uncharacterized LOC102005088 NW_004955563 1734092 1737196 - 102005088 AGCD01074160;GBDF01006732;XR_001232369;XR_265018 MODEL 8819473 protein-coding Ptch2 patched 2 ENCODES a protein that exhibits hedgehog family protein binding (ortholog); hedgehog receptor activity (ortholog); smoothened binding (ortholog); INVOLVED IN cell fate determination (ortholog); epidermal cell fate specification (ortholog); epidermis development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955464 13387844 13403991 + 102009156 AGCD01050274;AGCD01050275;GBDJ01143446;XM_005398741;XM_013521618;XM_013521619;XM_013521620;XM_013521621;XM_013521622;XM_013521623;XM_013521624;XM_013521625 XP_005398798;XP_013377072;XP_013377073;XP_013377074;XP_013377075;XP_013377076;XP_013377077;XP_013377078;XP_013377079 MODEL 10104730 protein-coding Defb135 defensin beta 135 ASSOCIATED WITH lymphoma (ortholog); thoracic aortic aneurysm (ortholog) NW_004955403 53199675 53211089 + 106148662 AGCD01003043;GBDF01267137;XM_013514932 XP_013370386 MODEL 8938628 protein-coding Thsd7a thrombospondin type 1 domain containing 7A INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog); podocyte foot (ortholog) NW_004955432 17896273 18111903 - 102003051 AGCD01031132;AGCD01031133;AGCD01031134;GBCE01162918;GBDJ01062851;XM_005388151 XP_005388208 MODEL 8743448 protein-coding Cacna2d3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); regulation of presynapse organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynaptic active zone membrane (ortholog) NW_004955430 4091308 4939899 + 102006487 AGCD01029241;AGCD01029242;AGCD01029243;AGCD01029244;AGCD01029245;AGCD01029246;AGCD01029247;AGCD01029248;AGCD01029249;AGCD01029250;GBCE01166764;GBDJ01394632;XM_013515709;XM_013515710;XM_013515711 XP_013371163;XP_013371164;XP_013371165 MODEL 8800982 protein-coding Rxfp3 relaxin family peptide receptor 3 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); INVOLVED IN phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of cytokinesis (ortholog) NW_004955426 19493990 19497074 + 102027551 AGCD01026547;XM_005386165 XP_005386222 MODEL 8979178 protein-coding Dstn destrin, actin depolymerizing factor ENCODES a protein that exhibits actin filament binding (ortholog); actin filament severing activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); cell motility (ortholog); positive regulation of actin filament depolymerization (ortholog); ASSOCIATED WITH Acute Otitis Media; Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955415 26567457 26598978 + 102009832 AGCD01016599;AGCD01016600;GBCB01022551;XM_005380907 XP_005380964 MODEL 9037887 protein-coding LOC102024027 granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like NW_004955499 966081 982611 + 102024027 AGCD01063302;AGCD01063303;GBBH01118355;GBBH01118356;XM_013505607 XP_013361061 MODEL 9000697 protein-coding LOC102006174 lipopolysaccharide-binding protein-like NW_004955445 18292277 18311475 - 102006174 AGCD01039901;AGCD01039902;GBDK01402655;XM_005392587 XP_005392644 MODEL 8950981 protein-coding Chek1 checkpoint kinase 1 ENCODES a protein that exhibits histone H3T11 kinase activity (ortholog); protein domain specific binding (ortholog); protein kinase activity (ortholog); INVOLVED IN apoptotic process involved in development (ortholog); cellular response to caffeine (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN G2/M DNA damage checkpoint pathway; p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); endometrial cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955412 26627606 26650554 + 102021953 AGCD01013204;GBDF01278392;XM_005378464 XP_005378521 MODEL 8716548 protein-coding LOC102005449 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 10831510 10832892 + 102005449 AGCD01048617;XM_013521142 XP_013376596 MODEL 8824283 protein-coding Commd1 copper metabolism domain containing 1 ENCODES a protein that exhibits copper ion binding (ortholog); identical protein binding (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); copper ion homeostasis (ortholog); Golgi to plasma membrane transport (ortholog); ASSOCIATED WITH allergic disease (ortholog); cervical cancer (ortholog); Chronic Hepatitis (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955424 21962837 22067745 - 102020137 AGCD01024921;AGCD01024922;AGCD01024923;AGCD01024924;AGCD01024925;AGCD01024926;AGCD01024927;AGCD01024928;AGCD01024929;AGCD01024930;GBCE01056265;GBDI01125496;XM_013514647 XP_013370101 MODEL 8963115 protein-coding LOC102003315 keratin-associated protein 13-1-like NW_004955407 29787812 29788369 + 102003315 AGCD01007615;XM_005375630 XP_005375687 MODEL 8802893 protein-coding Ppdpf pancreatic progenitor cell differentiation and proliferation factor INVOLVED IN liver development (ortholog); TOR signaling (ortholog); TORC1 signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955528 701182 718037 - 102010406 AGCD01069542;AGCD01069543;AGCD01069544;GBCE01002191;GBCQ01007600;XM_013507430 XP_013362884 MODEL 8740188 protein-coding Ctcf CCCTC-binding factor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin insulator sequence binding (ortholog); chromatin loop anchoring activity (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); chromatin looping (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); alveolar rhabdomyosarcoma (ortholog); Anosmia (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) NW_004955484 9041226 9092924 - 102027306 AGCD01058404;AGCD01058405;GBDK01184696;XM_005403639;XM_005403640;XM_013503946;XM_013503947 XP_005403696;XP_005403697;XP_013359400;XP_013359401 MODEL 8933391 ncrna LOC102025104 uncharacterized LOC102025104 NW_004955467 4852986 4885256 + 102025104 AGCD01051375;XR_001236831;XR_263334 MODEL 8753806 pseudo LOC102029724 cytochrome c oxidase subunit 7B, mitochondrial pseudogene NW_004955411 30546807 30547652 - 102029724 AGCD01012258 MODEL 8996451 ncrna LOC102012834 uncharacterized LOC102012834 NW_004955409 11180475 11194137 + 102012834 AGCD01009500;AGCD01009501;GBBH01138314;XR_001232647;XR_001232648 MODEL 8996490 protein-coding Ccdc42 coiled-coil domain containing 42 INVOLVED IN acrosome assembly (ortholog); centrosome cycle (ortholog); cilium assembly (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); FOUND IN centrosome (ortholog); manchette (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955467 8207590 8220426 + 102013489 AGCD01051445;GBDJ01422457;XM_005399393 XP_005399450 MODEL 39133892 misc_rna 7SK 7SK RNA 8754673 protein-coding Inip INTS3 and NABP interacting protein INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog) NW_004955419 14729275 14732971 + 102003023 AGCD01020042;AGCD01020043;GBCQ01099369;GBCQ01099370;XM_005382701 XP_005382758 MODEL 39131805 rrna 5S_rRNA 5S ribosomal RNA 8746034 protein-coding Dbt dihydrolipoamide branched chain transacylase E2 ENCODES a protein that exhibits dihydrolipoamide branched chain acyltransferase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); L-isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955435 4975664 5005126 - 102004512 AGCD01032868;GBCE01089296;GBCQ01065544;XM_005388795 XP_005388852 MODEL 9011050 pseudo LOC102011180 multifunctional protein ADE2-like NW_004955458 11807530 11818009 - 102011180 AGCD01047760 MODEL 9067303 ncrna LOC102003670 uncharacterized LOC102003670 NW_004955424 25890232 25893041 - 102003670 AGCD01025056;GBDF01023092;XR_261109 MODEL 8918115 pseudo LOC102010366 regulator of nonsense transcripts 2 pseudogene NW_004955416 11225709 11227659 + 102010366 AGCD01017181 MODEL 8808425 protein-coding Eif4g2 eukaryotic translation initiation factor 4 gamma 2 ENCODES a protein that exhibits translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN heart development (ortholog); negative regulation of autophagy (ortholog); positive regulation of axon extension (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 26389125 26399916 - 102020796 AGCD01015642;AGCD01015643;XM_005380528 XP_005380585 MODEL 39133294 snrna U4 U4 spliceosomal RNA 9015895 pseudo LOC102024028 serine-rich coiled-coil domain-containing protein 2 pseudogene NW_004955425 25294131 25298646 + 102024028 AGCD01025912;XR_261170 MODEL 8901511 protein-coding Pnpla7 patatin like domain 7, lysophospholipase ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN phosphatidylcholine catabolic process (ortholog); ASSOCIATED WITH Autosomal Recessive Peripheral Neuropathy with or without Impaired Intellectual Development (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955513 5376690 5436095 - 102016084 AGCD01066969;GBDF01043420;XM_005408619;XM_005408620;XM_005408621;XM_013506659;XM_013506660 XP_005408676;XP_005408677;XP_005408678;XP_013362113;XP_013362114 MODEL 8750196 protein-coding Dbx1 developing brain homeobox 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ventral spinal cord interneuron specification (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955476 1018715 1022648 - 102005463 AGCD01055200;XM_005401719 XP_005401776 MODEL 8979565 ncrna LOC102025811 uncharacterized LOC102025811 NW_004955423 17199291 17206236 + 102025811 AGCD01023847;GBDF01177742;XR_001234125;XR_001234126;XR_260980 MODEL 8821589 pseudo LOC102021952 ribonuclease T2 pseudogene NW_004955411 30267102 30267877 + 102021952 AGCD01012251 MODEL 8747882 protein-coding Trpm3 transient receptor potential cation channel subfamily M member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); monoatomic cation transport (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955434 2017809 2543827 + 102022219 AGCD01032082;AGCD01032083;AGCD01032084;AGCD01032085;AGCD01032086;AGCD01032087;AGCD01032088;AGCD01032089;AGCD01032090;AGCD01032091;AGCD01032092;AGCD01032093;AGCD01032094;AGCD01032095;AGCD01032096;AGCD01032097;GBDK01308805;XM_005388528;XM_005388530;XM_005388531;XM_005388535;XM_005388536;XM_005388541;XM_005388542;XM_005388548;XM_005388550;XM_005388552 XP_005388585;XP_005388587;XP_005388588;XP_005388592;XP_005388593;XP_005388598;XP_005388599;XP_005388605;XP_005388607;XP_005388609 MODEL 39132287 snorna SNORD33 Small nucleolar RNA Z195/SNORD33/SNORD32 family 9035198 protein-coding Pycr3 pyrroline-5-carboxylate reductase 3 ENCODES a protein that exhibits identical protein binding (ortholog); pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN L-glutamine catabolic process (ortholog); L-proline biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955454 2305485 2311280 - 102007405 AGCD01045015;GBCB01101013;XM_005395787 XP_005395844 MODEL 8899837 pseudo LOC102005092 golgin subfamily A member 5 pseudogene NW_004955594 631055 633335 - 102005092 AGCD01076436 MODEL 39132569 rrna 5S_rRNA 5S ribosomal RNA 10133507 protein-coding Defb136 defensin beta 136 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); antifungal innate immune response (ortholog); defense response to Gram-negative bacterium (ortholog); ASSOCIATED WITH thoracic aortic aneurysm (ortholog) NW_004955403 53168733 53170177 - 106148661 AGCD01003039;GBCQ01107685;XM_013514930 XP_013370384 MODEL 8736420 protein-coding Thsd7b thrombospondin type 1 domain containing 7B ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog) NW_004955440 4054497 4834962 + 102012029 AGCD01036255;AGCD01036256;AGCD01036257;AGCD01036258;AGCD01036259;AGCD01036260;AGCD01036261;AGCD01036262;AGCD01036263;AGCD01036264;AGCD01036265;AGCD01036266;AGCD01036267;AGCD01036268;AGCD01036269;GBBH01217705;XM_013517433 XP_013372887 MODEL 8968888 protein-coding Rxfp4 relaxin family peptide/INSL5 receptor 4 INVOLVED IN positive regulation of feeding behavior (ortholog) NW_004955545 2143832 2145939 + 102013548 AGCD01071886;XM_005411627 XP_005411684 MODEL 10103355 ncrna LOC106148520 uncharacterized LOC106148520 NW_004955423 7310060 7360188 + 106148520 AGCD01023596;XR_001234051 MODEL 9065083 ncrna LOC102006548 uncharacterized LOC102006548 NW_004955460 7441771 7442931 + 102006548 AGCD01048482;GBDF01093828;XR_263038 MODEL 9025031 protein-coding Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cone dystrophy (ortholog); FOUND IN voltage-gated calcium channel complex (ortholog) NW_004955454 4329520 4430460 - 102026185 AGCD01045121;AGCD01045122;GBDF01238757;XM_005396111 XP_005396168 MODEL 8720362 protein-coding Etfrf1 electron transfer flavoprotein regulatory factor 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN negative regulation of oxidative phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 20287287 20294430 + 102029279 AGCD01014212;GBDF01080150;XM_005379098;XM_013511449 XP_005379155;XP_013366903 MODEL 8836600 protein-coding Rfc4 replication factor C subunit 4 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); Elg1 RFC-like complex (ortholog) NW_004955420 20948549 20967845 + 102028973 AGCD01021114;AGCD01021115;AGCD01021116;AGCD01021117;GBBH01051801;XM_005383263 XP_005383320 MODEL 8908732 protein-coding Tab3 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); molecular adaptor activity (ortholog); zinc ion binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); non-canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); serine/threonine protein kinase complex (ortholog) NW_004955535 3547556 3612705 + 102029792 AGCD01070703;GBCE01186737;XM_005410491;XM_005410492;XM_005410493;XM_005410494;XM_005410496;XM_013507711;XM_013507712;XM_013507713;XM_013507714 XP_005410548;XP_005410549;XP_005410550;XP_005410551;XP_005410553;XP_013363165;XP_013363166;XP_013363167;XP_013363168 MODEL 39134455 misc_rna 7SK 7SK RNA 8969423 protein-coding Arhgef33 Rho guanine nucleotide exchange factor 33 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955441 6553460 6638776 + 102013553 AGCD01036930;AGCD01036931;AGCD01036932;AGCD01036933;AGCD01036934;AGCD01036935;AGCD01036936;GBDF01257952;XM_005391043 XP_005391100 MODEL 8895235 pseudo LOC102003316 plasma membrane calcium-transporting ATPase 4 pseudogene NW_004955455 2108161 2110677 + 102003316 AGCD01045588 MODEL 8876144 pseudo LOC102029725 vomeronasal type-1 receptor 4-like NW_004955465 12994315 12995153 - 102029725 AGCD01050576;XM_005399002 MODEL 8845050 protein-coding Fn1 fibronectin 1 ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); mercury ion binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media; acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basement membrane (ortholog); cell surface (ortholog) NW_004955457 629599 694948 + 102017427 AGCD01046712;GBCE01002201;XM_005396902;XM_005396903;XM_005396904;XM_005396905;XM_005396909;XM_005396910;XM_005396911;XM_005396912;XM_005396913;XM_013520687;XM_013520688;XM_013520689 XP_005396959;XP_005396960;XP_005396961;XP_005396962;XP_005396966;XP_005396967;XP_005396968;XP_005396969;XP_005396970;XP_013376141;XP_013376142;XP_013376143 MODEL 8982069 protein-coding Commd10 COMM domain containing 10 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 35887995 36045085 + 102026607 AGCD01008964;AGCD01008965;AGCD01008966;AGCD01008967;AGCD01008968;AGCD01008969;GBDI01256112;XM_005376533;XM_005376534;XM_005376535;XM_005376536 XP_005376590;XP_005376591;XP_005376592;XP_005376593 MODEL 8905714 protein-coding Wnt8a Wnt family member 8A ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell morphogenesis (ortholog); endoderm development (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH atrial fibrillation (ortholog); congenital fibrosis of the extraocular muscles (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN extracellular region (ortholog) NW_004955418 2332636 2338099 - 102007429 AGCD01018762;XM_005382133 XP_005382190 MODEL 8821720 protein-coding Ctcfl CCCTC-binding factor like ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone binding (ortholog); INVOLVED IN establishment of protein localization to chromatin (ortholog); genomic imprinting (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955445 1944845 1969502 + 102003913 AGCD01039347;GBDF01278023;XM_005392251;XM_005392252 XP_005392308;XP_005392309 MODEL 9033762 protein-coding Lrrc29 Leucine-rich repeat-containing protein 29 ASSOCIATED WITH pneumoconiosis (ortholog) NW_004955484 9399034 9414493 + 102009060 AGCD01058415;GBDF01053368;XM_005403671;XM_005403674;XM_013503906;XM_013503908;XM_013503909;XM_013503910;XM_013503911;XM_013503912;XM_013503913 XP_005403728;XP_005403731;XP_013359360;XP_013359362;XP_013359363;XP_013359364;XP_013359365;XP_013359366;XP_013359367 MODEL 8982933 protein-coding LOC102007680 olfactory receptor 13A1-like NW_004955507 6487198 6488139 - 102007680 AGCD01065718;XM_005407725 XP_005407782 MODEL 8810849 protein-coding Rad54l RAD54 like ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent DNA/DNA annealing activity (ortholog); INVOLVED IN chromosome organization (ortholog); determination of adult lifespan (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog); site of double-strand break (ortholog) NW_004955464 11996512 12033525 - 102020542 AGCD01050170;AGCD01050171;AGCD01050172;AGCD01050173;GBDI01210773;XM_005398677;XM_005398678;XM_005398680 XP_005398734;XP_005398735;XP_005398737 MODEL 8890664 protein-coding Slc16a12 solute carrier family 16 member 12 ENCODES a protein that exhibits creatine transmembrane transporter activity (ortholog); uniporter activity (ortholog); INVOLVED IN creatine transmembrane transport (ortholog); creatinine metabolic process (ortholog); ASSOCIATED WITH cataract 47 (ortholog); coloboma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955425 3474814 3560138 + 102015744 AGCD01025290;AGCD01025291;GBCQ01098505;XM_005385849 XP_005385906 MODEL 8752923 pseudo LOC102009226 40S ribosomal protein S13 pseudogene NW_004955550 1911159 1911637 - 102009226 AGCD01072597 MODEL 8754380 protein-coding Banf1 barrier to autointegration nuclear assembly factor 1 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN chromatin organization (ortholog); DNA integration (ortholog); mitotic nuclear membrane reassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); condensed chromosome (ortholog) NW_004955422 19337038 19338824 - 102022089 AGCD01023001;GBDK01018620;XM_005384437 XP_005384494 MODEL 8851058 protein-coding Chek2 checkpoint kinase 2 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to bisphenol A (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); basal cell carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); PML body (ortholog) NW_004955455 2969113 3008004 - 102022254 AGCD01045607;GBDF01014927;XM_005396164;XM_013520374;XM_013520375;XM_013520376;XM_013520377;XM_013520378;XM_013520379 XP_005396221;XP_013375828;XP_013375829;XP_013375830;XP_013375831;XP_013375832;XP_013375833 MODEL 9065673 protein-coding Ptchd1 patched domain containing 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cognition (ortholog); excitatory chemical synaptic transmission (ortholog); inhibitory chemical synaptic transmission (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); plasma membrane (ortholog); synapse (ortholog) NW_004955509 3716086 3767541 + 102013108 AGCD01066032;AGCD01066033;GBCE01090342;XM_005407829 XP_005407886 MODEL 8962839 protein-coding Inka1 inka box actin regulator 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN neural tube development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955532 1695956 1697521 + 102019430 AGCD01070198;GBCE01188453;GBCQ01178275;XM_005410222 XP_005410279 MODEL 8957456 pseudo LOC102018614 olfactory receptor 7E24-like NW_004955495 629283 630229 - 102018614 AGCD01061645 MODEL 8934547 protein-coding Dstyk dual serine/threonine and tyrosine protein kinase INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955406 40922972 40971433 - 102006095 AGCD01006667;GBDJ01279572;XM_005375347 XP_005375404 MODEL 8857490 protein-coding LOC102006178 UDP-glucuronosyltransferase 2B17-like NW_004955447 3671283 3776024 + 102006178 AGCD01040635;AGCD01040636;AGCD01040637;AGCD01040638;AGCD01040639;AGCD01040640;AGCD01040641;AGCD01040642;AGCD01040643;AGCD01040644;AGCD01040645;AGCD01040646;AGCD01040647;AGCD01040648;AGCD01040649;AGCD01040650;AGCD01040651;AGCD01040652;AGCD01040653;AGCD01040654;AGCD01040655;AGCD01040656;AGCD01040657;AGCD01040658;AGCD01040659;AGCD01040660;GBCQ01008307;XM_005392814;XM_005392815;XM_013518531;XM_013518532 XP_005392871;XP_005392872;XP_013373985;XP_013373986 MODEL 9052836 protein-coding LOC102012426 BBSome-interacting protein 1-like NW_004955478 7258776 7259420 - 102012426 AGCD01055956;XM_005402160 XP_005402217 MODEL 8928726 protein-coding Edaradd EDAR associated via death domain INVOLVED IN hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Cafe-au-Lait Spots (ortholog); ectodermal dysplasia (ortholog) NW_004955492 3709819 3777506 - 102019182 AGCD01060699;AGCD01060700;AGCD01060701;GBDI01249623;XM_005404937;XM_005404939;XM_005404940;XM_013504737 XP_005404994;XP_005404996;XP_005404997;XP_013360191 MODEL 8776912 ncrna LOC102005450 uncharacterized LOC102005450 NW_004955409 37458586 37465397 - 102005450 AGCD01010520;GBDJ01346495;XR_001232672;XR_259810 MODEL 8852130 ncrna LOC102025106 uncharacterized LOC102025106 NW_004955413 19310741 19316830 + 102025106 AGCD01014198;XR_260088 MODEL 8927205 protein-coding Shfl shiftless antiviral inhibitor of ribosomal frameshifting ENCODES a protein that exhibits identical protein binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of translational frameshifting (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955495 1431677 1437035 + 102027994 AGCD01061690;AGCD01061691;GBCE01030619;GBDK01073870;XM_005405581 XP_005405638 MODEL 8871740 protein-coding Eif4g3 eukaryotic translation initiation factor 4 gamma 3 ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); positive regulation of meiosis I (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); synapse (ortholog) NW_004955452 1328103 1625341 - 102024417 AGCD01043846;AGCD01043847;AGCD01043848;AGCD01043849;AGCD01043850;AGCD01043851;AGCD01043852;AGCD01043853;GBCE01118471;GBDK01197105;XM_013519508;XM_013519509;XM_013519510;XM_013519511;XM_013519512;XM_013519513;XM_013519514;XM_013519515 XP_013374962;XP_013374963;XP_013374964;XP_013374965;XP_013374966;XP_013374967;XP_013374968;XP_013374969 MODEL 8912222 protein-coding Dbx2 developing brain homeobox 2 INVOLVED IN epidermal growth factor receptor signaling pathway (ortholog); G2/M transition of mitotic cell cycle (ortholog); gene expression (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog) NW_004955500 4212848 4238727 - 102022309 AGCD01063772;GBDF01281507;XM_013505652 XP_013361106 MODEL 9010434 pseudo LOC102012837 glycerophosphocholine phosphodiesterase GPCPD1 pseudogene NW_004955410 7980036 7985561 - 102012837 AGCD01010730 MODEL 9014446 protein-coding LOC102021954 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 NW_004955467 3209822 3249484 - 102021954 AGCD01051331;AGCD01051332;GBCQ01153180;XM_005399335 XP_005399392 MODEL 39132289 snorna SNORD33 Small nucleolar RNA Z195/SNORD33/SNORD32 family 39133893 misc_rna 7SK 7SK RNA 8874737 protein-coding Ccdc43 coiled-coil domain containing 43 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955451 17548674 17559168 - 102013138 AGCD01043759;GBDJ01102972;XM_005394533;XM_005394534 XP_005394590;XP_005394591 MODEL 8813481 ncrna LOC102011190 uncharacterized LOC102011190 NW_004955413 27903491 27912153 + 102011190 AGCD01014537;GBDI01285497;XR_260120 MODEL 9031653 protein-coding LOC102005097 beta-defensin 8-like NW_004955403 53669665 53672863 + 102005097 AGCD01003067;GBDK01012916;XM_005373835 XP_005373892 MODEL 39133297 snrna U4 U4 spliceosomal RNA 39131390 protein-coding PPDPF pancreatic progenitor cell differentiation and proliferation factor 10193888 ncrna LOC106148521 uncharacterized LOC106148521 NW_004955423 23671298 23674780 - 106148521 AGCD01024010;XR_001234052 MODEL 8751388 protein-coding Rxra retinoid X receptor alpha ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA binding domain binding (ortholog); INVOLVED IN axon regeneration (ortholog); camera-type eye development (ortholog); cardiac muscle cell proliferation (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcoholic cardiomyopathy (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955513 3313544 3386544 + 102024492 AGCD01066901;GBDJ01079793;XM_005408467;XM_013506714 XP_005408524;XP_013362168 MODEL 8893022 protein-coding Pnpla8 patatin like domain 8, phospholipase A2 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); arachidonate secretion (ortholog); cardiolipin metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955410 12715072 12753433 - 102011514 AGCD01010864;GBDK01277528;XM_005377305;XM_005377306 XP_005377362;XP_005377363 MODEL 39134456 misc_rna 7SK 7SK RNA 8929016 protein-coding LOC102025812 calcium-activated chloride channel regulator 4-like NW_004955423 7580393 7613276 - 102025812 AGCD01023608;AGCD01023609;GBDF01291561;XM_005385358 XP_005385415 MODEL 8857388 pseudo LOC102003317 mRNA-decapping enzyme 1A pseudogene NW_004955407 3818922 3820235 - 102003317 AGCD01006866 MODEL 730469168 snorna SNORA44 Small nucleolar RNA SNORA44 8754107 protein-coding Pygb glycogen phosphorylase B ENCODES a protein that exhibits 1,4-alpha-oligoglucan phosphorylase activity (ortholog); carbohydrate binding (ortholog); glycogen phosphorylase activity (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog) NW_004955415 31254240 31283651 + 102011761 AGCD01016672;GBBH01062054;XM_005380992 XP_005381049 MODEL 8981103 protein-coding Commd2 COMM domain containing 2 ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955448 948642 964932 - 102021291 AGCD01041245;GBCE01053949;XM_005393002;XM_005393003;XM_013518682;XM_013518683 XP_005393059;XP_005393060;XP_013374136;XP_013374137 MODEL 8865513 protein-coding Fn3k fructosamine 3 kinase ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (ortholog); protein-ribulosamine 3-kinase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fructosamine metabolic process (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955506 434613 451063 - 102005399 AGCD01065226;AGCD01065227;AGCD01065228;GBDJ01126427;XM_013506007;XM_013506008;XM_013506009;XM_013506010;XM_013506011;XM_013506012 XP_013361461;XP_013361462;XP_013361463;XP_013361464;XP_013361465;XP_013361466 MODEL 8794655 ncrna LOC102010368 uncharacterized LOC102010368 NW_004955417 26506352 26519514 - 102010368 AGCD01018512;AGCD01018513;GBDJ01093566;XR_001233419;XR_001233420;XR_001233421 MODEL 8950406 protein-coding Lrrc3 leucine rich repeat containing 3 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955407 41053671 41056103 - 102025324 AGCD01007854;GBDF01287458;XM_005375859 XP_005375916 MODEL 39132572 rrna 5S_rRNA 5S ribosomal RNA 8898072 protein-coding Banf2 BANF family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955415 26671039 26692478 + 102010798 AGCD01016602;GBBH01129166;XM_005380909 XP_005380966 MODEL 8753427 protein-coding Degs1 delta 4-desaturase, sphingolipid 1 ENCODES a protein that exhibits retinol isomerase activity (ortholog); sphingolipid delta-4 desaturase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); myelin maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 18 (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog) NW_004955520 1139568 1143149 - 102010618 AGCD01068044;GBDF01002918;GBDJ01020741;XM_005409229 XP_005409286 MODEL 8913281 pseudo LOC102006549 E3 ISG15--protein ligase HERC5-like NW_004955409 19021413 19028218 + 102006549 AGCD01009854 MODEL 8826414 protein-coding Ptchd3 patched domain containing 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); sperm midpiece (ortholog) NW_004955476 11870822 11895903 - 102004160 AGCD01055475;GBDF01052329;XM_005401894 XP_005401951 MODEL 8994314 pseudo LOC102018615 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 pseudogene NW_004955423 116522 118457 + 102018615 AGCD01023410 MODEL 8962367 protein-coding Cherp calcium homeostasis endoplasmic reticulum protein ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955524 1224698 1235192 + 102029435 AGCD01068739;AGCD01068740;GBBH01142712;GBDF01005378;XM_013507227 XP_013362681 MODEL 10155974 ncrna LOC106147426 uncharacterized LOC106147426 NW_004955558 798091 805169 - 106147426 AGCD01073391;AGCD01073392;XR_001232326 MODEL 8803771 protein-coding Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); high voltage-gated calcium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to amyloid-beta (ortholog); protein targeting to membrane (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); congenital muscular dystrophy-dystroglycanopathy type A12 (ortholog); lung cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) NW_004955451 14041848 14059740 - 102023219 AGCD01043525;AGCD01043526;AGCD01043527;GBCE01131655;XM_005394294;XM_005394295;XM_005394296;XM_005394298 XP_005394351;XP_005394352;XP_005394353;XP_005394355 MODEL 39133306 snrna U4 U4 spliceosomal RNA 8710547 ncrna LOC102012427 uncharacterized LOC102012427 NW_004955479 4854411 4862694 - 102012427 AGCD01056335;AGCD01056336;GBDF01305284;XR_001230876 MODEL 9014846 protein-coding Rfc5 replication factor C subunit 5 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); Rad17 RFC-like complex (ortholog) NW_004955455 13325912 13337241 - 102020758 AGCD01046069;GBDF01300839;XM_005396539 XP_005396596 MODEL 8985873 protein-coding LOC102025110 taste receptor type 2 member 14-like NW_004955413 8203676 8204596 - 102025110 AGCD01013854;XM_005379632 XP_005379689 MODEL 8750859 protein-coding LOC102029733 interferon-induced very large GTPase 1-like NW_004955414 22520562 22530383 - 102029733 AGCD01015460;GBBH01155721;XM_005380172 XP_005380229 MODEL 8991873 protein-coding Tac1 tachykinin precursor 1 ENCODES a protein that exhibits neuromedin K receptor binding (ortholog); neuropeptide activity (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); associative learning (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); allergic disease (ortholog); amnestic disorder (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955432 13991647 13999665 + 102022114 AGCD01031034;GBDI01209813;XM_005388077;XM_005388078;XM_005388079;XM_005388080 XP_005388134;XP_005388135;XP_005388136;XP_005388137 MODEL 39131806 rrna 5S_rRNA 5S ribosomal RNA 8943052 protein-coding Arhgef37 Rho guanine nucleotide exchange factor 37 INVOLVED IN clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lymphoma (ortholog) NW_004955415 4850120 4900483 - 102021235 AGCD01015986;AGCD01015987;GBCE01179367;XM_005380595;XM_005380596;XM_005380598;XM_005380599;XM_005380601;XM_013512369;XM_013512370;XM_013512371 XP_005380652;XP_005380653;XP_005380655;XP_005380656;XP_005380658;XP_013367823;XP_013367824;XP_013367825 MODEL 8885517 protein-coding LOC102009229 kallikrein-4-like NW_004955558 1932972 1936783 + 102009229 AGCD01073488;GBDF01079517;XM_005412753 XP_005412810 MODEL 8728420 protein-coding Dcaf1 DDB1 and CUL4 associated factor 1 ENCODES a protein that exhibits histone H2AT120 kinase activity (ortholog); nuclear estrogen receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cell competition in a multicellular organism (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); COP9 signalosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955532 3085386 3153952 - 102016515 AGCD01070267;AGCD01070268;AGCD01070269;GBCB01076935;XM_005410312;XM_005410314;XM_013507626;XM_013507627 XP_005410369;XP_005410371;XP_013363080;XP_013363081 MODEL 8970289 protein-coding Thtpa thiamine triphosphatase ENCODES a protein that exhibits magnesium ion binding (ortholog); thiamine triphosphate phosphatase activity (ortholog); INVOLVED IN thiamine diphosphate biosynthetic process (ortholog); thiamine diphosphate metabolic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955409 36803721 36808094 - 102016453 AGCD01010481;AGCD01010482;GBBH01188134;XM_005377061;XM_013510425;XM_013510426;XM_013510427 XP_005377118;XP_013365879;XP_013365880;XP_013365881 MODEL 8816060 pseudo LOC102024030 E3 ubiquitin-protein ligase Praja-2 pseudogene NW_004955503 7343198 7345404 + 102024030 AGCD01064789 MODEL 8866129 protein-coding Inka2 inka box actin regulator 2 ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955435 15179883 15195457 - 102028459 AGCD01033263;GBDF01056552;XM_005388952 XP_005389009 MODEL 9050556 protein-coding Ethe1 ETHE1 persulfide dioxygenase ENCODES a protein that exhibits identical protein binding (ortholog); iron ion binding (ortholog); sulfur dioxygenase activity (ortholog); INVOLVED IN glutathione metabolic process (ortholog); sulfide oxidation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ethylmalonic encephalopathy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955555 1262860 1279714 - 102016105 AGCD01073068;AGCD01073069;GBDJ01127270;XM_005412440 XP_005412497 MODEL 9028731 pseudo LOC102006179 histidine triad nucleotide-binding protein 1 pseudogene NW_004955575 1174358 1174782 + 102006179 AGCD01075234 MODEL 8828714 pseudo LOC102005452 protein kinase C iota type pseudogene NW_004955411 3980164 3982123 - 102005452 AGCD01011566 MODEL 8919683 protein-coding Edc3 enhancer of mRNA decapping 3 ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 50 (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog) NW_004955450 3193150 3249933 + 102011380 AGCD01042426;GBDF01082254;XM_005393548;XM_005393549 XP_005393605;XP_005393606 MODEL 9063969 protein-coding Eif4h eukaryotic translation initiation factor 4H INVOLVED IN developmental growth (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955456 13699012 13710065 - 102019472 AGCD01046612;GBCB01007540;XM_013520517 XP_013375971 MODEL 8765304 protein-coding Ctdnep1 CTD nuclear envelope phosphatase 1 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN gamete generation (ortholog); mesoderm development (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); medulloblastoma non-WNT/non-SHH (ortholog); medulloblastoma non-WNT/non-SHH group 3 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); Nem1-Spo7 phosphatase complex (ortholog) NW_004955467 9660088 9666878 + 102025671 AGCD01051520;AGCD01051521;GBBH01119701;GBCB01006512;XM_005399537 XP_005399594 MODEL 8827848 protein-coding LOC102003671 zinc finger protein 431-like NW_004955499 450865 478358 - 102003671 AGCD01063232;GBDI01258841;XM_005406501;XM_013505568;XM_013505569 XP_005406558;XP_013361022;XP_013361023 MODEL 8741504 protein-coding Wnt8b Wnt family member 8B ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of gene expression (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955485 9658432 9679371 - 102010268 AGCD01058777;AGCD01058778;AGCD01058779;GBDI01289442;XM_005403912 XP_005403969 MODEL 8971750 pseudo LOC102012841 LYR motif-containing protein 1 pseudogene NW_004955466 2598628 2602417 - 102012841 AGCD01050748 MODEL 9026840 protein-coding LOC102007682 olfactory receptor 5M3 NW_004955511 1640219 1641157 - 102007682 AGCD01066377;XM_005407968 XP_005408025 MODEL 8861263 pseudo LOC102003320 UDP-N-acetylhexosamine pyrophosphorylase-like NW_004955460 10516392 10518340 - 102003320 AGCD01048586 MODEL 8782713 protein-coding Slc16a13 solute carrier family 16 member 13 ASSOCIATED WITH lung squamous cell carcinoma (ortholog); sarcoma (ortholog); Short Stature with Nonspecific Skeletal Abnormalities 1 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955467 9894833 9900295 - 102006645 AGCD01051535;GBDJ01261667;XM_005399572;XM_013522101;XM_013522102 XP_005399629;XP_013377555;XP_013377556 MODEL 39131948 snorna SNORD34 Small nucleolar RNA SNORD34 8779469 protein-coding LOC102021956 alpha-2-macroglobulin ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); calcium-dependent protein binding (ortholog); endopeptidase inhibitor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); acute-phase response (ortholog); embryonic liver development (ortholog); PARTICIPATES IN Alzheimer's disease pathway; immune response pathway; inflammatory response pathway; ASSOCIATED WITH otitis media; Otitis Media with Effusion; suppurative otitis media; FOUND IN extracellular region NW_004955413 6019457 6062366 + 102021956 AGCD01013700;AGCD01013701;AGCD01013702;AGCD01013703;GBDI01021440;XM_005378889 XP_005378946 MODEL 8952964 protein-coding Ccdc47 coiled-coil domain containing 47 ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); ribosome binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog) NW_004955478 8053057 8074530 + 102020803 AGCD01056005;GBDF01086670;XM_005402187;XM_005402188 XP_005402244;XP_005402245 MODEL 8967426 ncrna LOC102011192 uncharacterized LOC102011192 NW_004955469 9744913 9758948 + 102011192 AGCD01052516;GBCB01088434;XR_263445 MODEL 39132574 rrna 5S_rRNA 5S ribosomal RNA 9010237 protein-coding Fn3krp fructosamine 3 kinase related protein ENCODES a protein that exhibits protein-ribulosamine 3-kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955506 451455 461073 - 102005733 AGCD01065228;GBCQ01066287;XM_005407184 XP_005407241 MODEL 9064744 protein-coding Rad54l2 RAD54 like 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); DNA/RNA helicase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); R-loop processing (ortholog); transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH Apnea (ortholog); brain disease (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nuclear speck (ortholog) NW_004955532 3177655 3271683 + 102017811 AGCD01070270;AGCD01070271;AGCD01070272;AGCD01070273;AGCD01070274;AGCD01070275;GBDF01252419;XM_005410317;XM_005410318 XP_005410374;XP_005410375 MODEL 8971563 ncrna LOC102006552 uncharacterized LOC102006552 NW_004955463 9133087 9192984 - 102006552 AGCD01049772;AGCD01049773;AGCD01049774;GBDF01280994;XR_263162 MODEL 8836550 protein-coding Ppdpfl pancreatic progenitor cell differentiation and proliferation factor like ASSOCIATED WITH lung cancer (ortholog) NW_004955454 8902630 8907721 + 102025977 AGCD01045328;GBCB01001157;XM_005396047 XP_005396104 MODEL 8991887 protein-coding Trpm4 transient receptor potential cation channel subfamily M member 4 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN calcium ion transport (ortholog); calcium-mediated signaling (ortholog); cellular response to ATP (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); atrioventricular block (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955559 1539036 1581800 - 102022131 AGCD01073648;AGCD01073649;AGCD01073650;AGCD01073651;GBDJ01147170;XM_005412902;XM_005412903 XP_005412959;XP_005412960 MODEL 8920943 protein-coding Ptchd4 patched domain containing 4 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955437 12253731 12423865 - 102014709 AGCD01034603;AGCD01034604;AGCD01034605;AGCD01034606;AGCD01034607;AGCD01034608;GBDF01162944;XM_005389880 XP_005389937 MODEL 8888727 protein-coding Shh sonic hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); cholesterol-protein transferase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); androgen metabolic process (ortholog); angiogenesis (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; forkhead class A signaling pathway; glypican signaling pathway; ASSOCIATED WITH acrocallosal syndrome (ortholog); Agenesis of Corpus Callosum (ortholog); anemia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955491 8647133 8657381 - 102007024 AGCD01060619;AGCD01060620;GBCQ01149994;GBDK01027253;XM_013504572 XP_013360026 MODEL 9009717 protein-coding Pnpo pyridoxamine 5'-phosphate oxidase ENCODES a protein that exhibits FMN binding (ortholog); protein homodimerization activity (ortholog); pyridoxal phosphate binding (ortholog); INVOLVED IN pyridoxal 5'-phosphate biosynthetic process (ortholog); vitamin B6 metabolic process (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955451 13184861 13190933 - 102011938 AGCD01043458;GBDI01173325;XM_005394258 XP_005394315 MODEL 39134457 misc_rna 7SK 7SK RNA 8721119 ncrna LOC102012428 uncharacterized LOC102012428 NW_004955417 7483800 7490830 + 102012428 AGCD01018005;AGCD01018006;GBDF01137161;XR_260463 MODEL 9018036 protein-coding Arhgef38 Rho guanine nucleotide exchange factor 38 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955496 3584693 3700620 - 102009627 AGCD01062296;AGCD01062297;AGCD01062298;GBBH01201336;XM_005406224;XM_005406225;XM_013505412 XP_005406281;XP_005406282;XP_013360866 MODEL 8753930 ncrna LOC102005104 uncharacterized LOC102005104 NW_004955405 37762470 37765454 + 102005104 AGCD01005459;GBDF01250665;XR_001236112 MODEL 8727583 protein-coding Pygl glycogen phosphorylase L ENCODES a protein that exhibits 1,4-alpha-oligoglucan phosphorylase activity (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); glucose homeostasis (ortholog); glycogen catabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen degradation pathway; glycogen metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955409 11970112 12007102 + 102014538 AGCD01009530;GBBH01062062;XM_005376795 XP_005376852 MODEL 9009867 protein-coding Commd3 COMM domain containing 3 INVOLVED IN gene expression (ortholog); intracellular copper ion homeostasis (ortholog); response to hormone (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955429 6559824 6563701 - 102018119 AGCD01028553;GBBH01092657;GBBH01092658;XM_005386934 XP_005386991 MODEL 9068082 protein-coding LOC102010369 galectin-9-like NW_004955481 5706510 5744393 - 102010369 AGCD01057000;AGCD01057001;AGCD01057002;GBCE01150879;XM_013503348;XM_013503349 XP_013358802;XP_013358803 MODEL 8714189 protein-coding Dtd1 D-aminoacyl-tRNA deacylase 1 ENCODES a protein that exhibits DNA binding (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955415 27089117 27195034 + 102018386 AGCD01016622;AGCD01016623;GBDF01081467;XM_005380934;XM_005380935 XP_005380991;XP_005380992 MODEL 8725206 protein-coding Lrrc30 leucine rich repeat containing 30 NW_004955402 4174990 4178170 - 102004214 AGCD01000113;GBCB01044200;XM_005372621 XP_005372678 MODEL 8773867 protein-coding Degs2 delta 4-desaturase, sphingolipid 2 ENCODES a protein that exhibits sphingolipid C4-monooxygenase activity (ortholog); sphingolipid delta-4 desaturase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); sphinganine metabolic process (ortholog); sphingolipid biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955438 21300118 21313330 - 102005417 AGCD01035532;GBCQ01124650;XM_005390429 XP_005390486 MODEL 10205573 ncrna LOC106147427 uncharacterized LOC106147427 NW_004955558 789810 792199 + 106147427 AGCD01073390;GBDF01066394;XR_001232327 MODEL 8744440 pseudo LOC102018617 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7595180 7606574 - 102018617 AGCD01062154 MODEL 10197110 ncrna LOC106148522 uncharacterized LOC106148522 NW_004955423 23680219 23683700 - 106148522 AGCD01024011;XR_001234053 MODEL 8936891 protein-coding LOC102006182 arylacetamide deacetylase-like NW_004955448 3031084 3044420 + 102006182 AGCD01041300;AGCD01041301;GBBH01008796;XM_005393036 XP_005393093 MODEL 8829084 protein-coding Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 ENCODES a protein that exhibits actin filament binding (ortholog); calcium channel regulator activity (ortholog); high voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); chemical synaptic transmission (ortholog); membrane depolarization during atrial cardiac muscle cell action potential (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog); photoreceptor ribbon synapse (ortholog); voltage-gated calcium channel complex (ortholog) NW_004955429 9642725 9966175 - 102023505 AGCD01028652;AGCD01028653;AGCD01028654;AGCD01028655;AGCD01028656;AGCD01028657;AGCD01028658;AGCD01028659;AGCD01028660;GBCE01186840;GBCE01186846;XM_013515436;XM_013515437;XM_013515438 XP_013370890;XP_013370891;XP_013370892 MODEL 39133311 snrna U4 U4 spliceosomal RNA 39133894 misc_rna 7SK 7SK RNA 9068137 protein-coding Rfesd Rieske Fe-S domain containing NW_004955418 16897714 16900324 - 102015723 AGCD01019133;GBBH01113392;GBCB01057071;XM_013513067 XP_013368521 MODEL 8814984 protein-coding Ppef1 protein phosphatase with EF-hand domain 1 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); lung cancer (ortholog) NW_004955586 597620 761433 - 102007831 AGCD01076035;AGCD01076036;AGCD01076037;AGCD01076038;AGCD01076039;AGCD01076040;AGCD01076041;AGCD01076042;AGCD01076043;AGCD01076044;GBDF01194348;XM_005414441;XM_013509899;XM_013509900;XM_013509901 XP_005414498;XP_013365353;XP_013365354;XP_013365355 MODEL 8770277 protein-coding Eif5 eukaryotic translation initiation factor 5 ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); formation of translation preinitiation complex (ortholog); regulation of translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955538 2226493 2233275 + 102008982 AGCD01071110;GBDF01008662;XM_005410773 XP_005410830 MODEL 8706379 protein-coding Pnpt1 polyribonucleotide nucleotidyltransferase 1 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); identical protein binding (ortholog); miRNA binding (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); cellular response to oxidative stress (ortholog); liver regeneration (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); autosomal recessive nonsyndromic deafness 70 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 27407451 27449830 + 102006366 AGCD01025116;AGCD01025117;GBBH01149997;XM_005385770;XM_013514724 XP_005385827;XP_013370178 MODEL 8729836 protein-coding LOC102021959 major allergen I polypeptide chain 1-like NW_004955468 4185332 4186669 + 102021959 AGCD01051895;XM_013522295 XP_013377749 MODEL 8841914 protein-coding Dcaf10 DDB1 and CUL4 associated factor 10 ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955419 28617171 28671475 - 102029970 AGCD01020470;AGCD01020471;AGCD01020472;AGCD01020473;GBBH01155192;GBCB01089630;XM_005382862 XP_005382919 MODEL 8826199 ncrna LOC102024032 uncharacterized LOC102024032 NW_004955427 19936159 19952591 + 102024032 AGCD01027389;GBDF01126122;XR_001234392;XR_261282 MODEL 8896051 protein-coding Etnk1 ethanolamine kinase 1 ENCODES a protein that exhibits ethanolamine kinase activity (ortholog); INVOLVED IN phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 18036646 18094875 + 102024781 AGCD01014167;GBDF01044052;XM_005379081 XP_005379138 MODEL 8924018 protein-coding Chfr checkpoint with forkhead and ring finger domains ENCODES a protein that exhibits nucleotide binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN meiotic spindle checkpoint signaling (ortholog); mitotic cell cycle (ortholog); mitotic G2/M transition checkpoint (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN nucleus (ortholog); PML body (ortholog) NW_004955482 233485 267064 + 102016596 AGCD01057167;AGCD01057168;GBDK01193286;XM_005402938;XM_005402939 XP_005402995;XP_005402996 MODEL 8882384 protein-coding Rxrb retinoid X receptor beta ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); cellular response to retinoic acid (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955437 1767833 1774401 - 102028128 AGCD01034233;GBCE01004573;XM_005389474;XM_005389475;XM_005389477 XP_005389531;XP_005389532;XP_005389534 MODEL 8868138 protein-coding Rad9a RAD9 checkpoint clamp component A ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); double-stranded DNA 3'-5' DNA exonuclease activity (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN checkpoint clamp complex (ortholog); cytoplasm (ortholog); nuclear body (ortholog) NW_004955422 18079634 18146122 - 102021357 AGCD01022936;AGCD01022937;GBBH01142846;XM_005384341;XM_005384342;XM_005384343;XM_013513939;XM_013513940;XM_013513941;XM_013513942;XM_013513943 XP_005384398;XP_005384399;XP_005384400;XP_013369393;XP_013369394;XP_013369395;XP_013369396;XP_013369397 MODEL 8947314 protein-coding LOC102025815 melanoma-associated antigen 8-like NW_004955498 4946583 4947701 - 102025815 AGCD01063033;XM_005406489 XP_005406546 MODEL 39131807 rrna 5S_rRNA 5S ribosomal RNA 8756732 protein-coding LOC102005453 olfactory receptor 8D1-like NW_004955412 25120340 25121215 - 102005453 AGCD01013135;XM_013511250 XP_013366704 MODEL 8922057 protein-coding LOC102029734 olfactory receptor 52D1-like NW_004955414 20853356 20854300 - 102029734 AGCD01015392;XM_013511726 XP_013367180 MODEL 9056834 protein-coding LOC102025111 T-cell ecto-ADP-ribosyltransferase 1-like NW_004955414 18887480 18897593 - 102025111 AGCD01015292;GBDJ01402723;XM_005379987 XP_005380044 MODEL 8992721 protein-coding Edc4 enhancer of mRNA decapping 4 PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8820578 8832428 - 102020916 AGCD01058398;GBBH01033452;XM_005403616;XM_013503883 XP_005403673;XP_013359337 MODEL 8962480 pseudo LOC102003672 60S ribosomal protein L17 pseudogene NW_004955424 27996316 28003860 - 102003672 AGCD01025143;AGCD01025144;XM_005385817 MODEL 8843888 pseudo LOC102012843 T-complex protein 1 subunit alpha pseudogene NW_004955466 3144704 3150696 - 102012843 AGCD01050787 MODEL 8887541 protein-coding Ctdp1 CTD phosphatase 1 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); Tat protein binding (ortholog); TFIIF-class transcription factor complex binding (ortholog); INVOLVED IN exit from mitosis (ortholog); host-mediated activation of viral transcription (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Ataxia (ortholog); cataract (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); midbody (ortholog); nucleoplasm (ortholog) NW_004955402 62817822 62914250 + 102025860 AGCD01001649;AGCD01001650;GBBH01006923;GBDF01053785;XM_005373116;XM_013511639 XP_005373173;XP_013367093 MODEL 39134458 misc_rna 7SK 7SK RNA 9029470 pseudo LOC102012430 39S ribosomal protein L21, mitochondrial pseudogene NW_004955417 9985249 9986014 + 102012430 AGCD01018063 MODEL 8828732 pseudo LOC102009232 phosphorylated adapter RNA export protein pseudogene NW_004955444 566028 567654 + 102009232 AGCD01038678 MODEL 8812114 protein-coding Wnt9a Wnt family member 9A ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); embryonic forelimb morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; pancreatic cancer pathway; Wnt signaling pathway; ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955581 422028 438321 + 102016863 AGCD01075672;GBCB01076994;XM_005414245 XP_005414302 MODEL 8881843 protein-coding Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); protein kinase binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); L-type voltage-gated calcium channel complex (ortholog) NW_004955500 7676331 7685174 + 102007251 AGCD01063940;GBCE01031695;GBCQ01113306;XM_005406665 XP_005406722 MODEL 39132938 snorna SNORD35 Small nucleolar RNA SNORD35 8803964 protein-coding Slc16a14 solute carrier family 16 member 14 ASSOCIATED WITH cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955453 5011638 5044259 + 102029585 AGCD01044702;AGCD01044703;AGCD01044704;GBCE01147531;GBDJ01095780;XM_005395421 XP_005395478 MODEL 8753248 protein-coding Thumpd1 THUMP domain 1 NAT10 acetyltransferase adaptor ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH SPEECH DELAY AND VARIABLE OCULAR ANOMALIES (ortholog) NW_004955493 32326 40283 - 102027865 AGCD01060835;GBCE01097709;XM_005405026 XP_005405083 MODEL 8953683 protein-coding LOC102011194 cytochrome c oxidase assembly factor 4 homolog, mitochondrial ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955414 17658281 17661867 + 102011194 AGCD01015247;AGCD01015248;GBDF01220602;XM_005379932 XP_005379989 MODEL 39132580 rrna 5S_rRNA 5S ribosomal RNA 8944491 ncrna LOC102005111 uncharacterized LOC102005111 NW_004955456 1951198 1954207 + 102005111 AGCD01046243;GBDF01252185;XR_001236331;XR_001236332 MODEL 8795844 protein-coding Fnbp1 formin binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955513 86004 137631 - 102020597 AGCD01066814;GBCQ01067279;GBDJ01176334;XM_013506667;XM_013506668;XM_013506669;XM_013506670;XM_013506671;XM_013506672 XP_013362121;XP_013362122;XP_013362123;XP_013362124;XP_013362125;XP_013362126 MODEL 8720377 pseudo LOC102006553 CAP-Gly domain-containing linker protein 1 pseudogene NW_004955463 5125915 5126991 - 102006553 AGCD01049632 MODEL 9000602 protein-coding Pygm glycogen phosphorylase, muscle associated ENCODES a protein that exhibits 1,4-alpha-oligoglucan phosphorylase activity (ortholog); AMP binding (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); brachydactyly (ortholog); cervical cancer (ortholog); FOUND IN sarcoplasmic reticulum (ortholog) NW_004955422 20411480 20424676 + 102030205 AGCD01023079;GBBH01100132;XM_005384564 XP_005384621 MODEL 8934344 protein-coding Ptcra pre T cell antigen receptor alpha INVOLVED IN alpha-beta T cell differentiation (ortholog); negative regulation of thymocyte apoptotic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Immunodeficiency 126 (ortholog); polycystic ovary syndrome (ortholog); Zellweger syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 8920997 8927354 + 102025508 AGCD01034507;GBCQ01091734;XM_005389728;XM_005389729;XM_005389730;XM_005389731;XM_005389732;XM_013516772 XP_005389785;XP_005389786;XP_005389787;XP_005389788;XP_005389789;XP_013372226 MODEL 8859072 protein-coding Bank1 B cell scaffold protein with ankyrin repeats 1 ENCODES a protein that exhibits phospholipase binding (ortholog); protease binding (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN B cell activation (ortholog); negative regulation of B cell activation (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autoimmune thyroiditis (ortholog); cervical cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955496 6267618 6511195 - 102030212 AGCD01062366;AGCD01062367;GBDI01294378;XM_013505420;XM_013505421 XP_013360874;XP_013360875 MODEL 9025654 protein-coding Dek DEK proto-oncogene ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of double-strand break repair (ortholog); regulation of double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN B-WICH complex (ortholog); contractile muscle fiber (ortholog); nucleoplasm (ortholog) NW_004955408 28470207 28472083 - 102008065 AGCD01008713;XM_013509494 XP_013364948 MODEL 8900963 protein-coding Tac3 tachykinin precursor 3 ENCODES a protein that exhibits neuromedin K receptor binding (ortholog); receptor ligand activity (ortholog); substance K receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating tachykinin receptor signaling pathway (ortholog); positive regulation of blood pressure (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Delayed Puberty (ortholog); hypertension (ortholog); FOUND IN extracellular region (ortholog) NW_004955458 4765153 4771122 - 102018806 AGCD01047440;GBDF01226093;XM_005397338;XM_013520998 XP_005397395;XP_013376452 MODEL 8954698 ncrna LOC102018618 uncharacterized LOC102018618 NW_004955496 6005138 6016243 + 102018618 AGCD01062360;GBDF01112432;XR_001231412;XR_001231413;XR_001231414;XR_001231415;XR_001231416;XR_001231417;XR_001231418;XR_001231419;XR_001231420;XR_001231421;XR_264181 MODEL 8734398 protein-coding Etnk2 ethanolamine kinase 2 ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); multicellular organism growth (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955406 39996850 40013753 - 102017842 AGCD01006650;GBDK01051887;XM_005375285 XP_005375342 MODEL 8994906 protein-coding Trpm5 transient receptor potential cation channel subfamily M member 5 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN monoatomic ion transmembrane transport (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955422 14180067 14202041 - 102009068 AGCD01022855;GBBH01106809;XM_013514348;XM_013514349 XP_013369802;XP_013369803 MODEL 8972168 pseudo LOC102003321 zinc finger protein 64 homolog NW_004955409 16616488 16619136 + 102003321 AGCD01009731 MODEL 39133312 snrna U4 U4 spliceosomal RNA 8709907 protein-coding Ccdc50 coiled-coil domain containing 50 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 44 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955420 16884985 16948038 - 102013510 AGCD01021008;AGCD01021009;AGCD01021010;AGCD01021011;GBCE01117027;XM_005383218 XP_005383275 MODEL 8745311 protein-coding Ino80 INO80 complex ATPase subunit ENCODES a protein that exhibits alpha-tubulin binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 7870521 8020862 - 102003865 AGCD01017017;AGCD01017018;AGCD01017019;AGCD01017020;AGCD01017021;AGCD01017022;GBCE01141933;XM_005381275;XM_005381276;XM_013512574 XP_005381332;XP_005381333;XP_013368028 MODEL 8950715 protein-coding LOC102009234 prolactin-like NW_004955576 435369 491017 + 102009234 AGCD01075276;AGCD01075277;AGCD01075278;AGCD01075279;AGCD01075280;AGCD01075281;AGCD01075282;AGCD01075283;XM_005413946 XP_005414003 MODEL 8871221 pseudo LOC102010370 tax1-binding protein 1 homolog NW_004955418 30088883 30095400 + 102010370 AGCD01019503 MODEL 8819306 protein-coding Pnrc1 proline rich nuclear receptor coactivator 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog) NW_004955411 15837491 15841277 + 102004363 AGCD01011952;AGCD01011953;GBDF01303221;GBDJ01006301;XM_013510921 XP_013366375 MODEL 9066791 protein-coding Commd4 COMM domain containing 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955450 2891920 2895009 - 102028254 AGCD01042410;GBDF01053982;XM_013518817;XM_013518818 XP_013374271;XP_013374272 MODEL 10186588 protein-coding LOC106147429 basic proline-rich protein-like NW_004955558 860196 861286 + 106147429 AGCD01073395;AGCD01073396;GBDF01118753;GBDF01118755;XM_013508885 XP_013364339 MODEL 9007841 protein-coding Lrrc32 leucine rich repeat containing 32 ENCODES a protein that exhibits receptor ligand inhibitor activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN establishment of protein localization to extracellular region (ortholog); negative regulation of activated T cell proliferation (ortholog); negative regulation of cytokine production (ortholog); ASSOCIATED WITH asthma (ortholog); brain glioblastoma multiforme (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955414 15296704 15309088 + 102014441 AGCD01015182;GBBH01168987;XM_005379850;XM_005379851;XM_005379852;XM_005379853;XM_013512077 XP_005379907;XP_005379908;XP_005379909;XP_005379910;XP_013367531 MODEL 8956902 protein-coding Shisa2 shisa family member 2 INVOLVED IN negative regulation of fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955497 5453682 5459680 - 102024702 AGCD01062593;GBCE01134715;GBDK01235162;XM_005406336 XP_005406393 MODEL 8835072 protein-coding Chga chromogranin A INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); mast cell activation (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); end stage renal disease (ortholog); FOUND IN chromaffin granule (ortholog); extracellular region (ortholog); neuronal dense core vesicle (ortholog) NW_004955438 15092267 15104321 + 102029121 AGCD01035359;GBDI01062982;XM_005390335;XM_005390336;XM_005390337;XM_005390338;XM_005390339 XP_005390392;XP_005390393;XP_005390394;XP_005390395;XP_005390396 MODEL 9056275 protein-coding LOC102007683 olfactory receptor 10AG1-like NW_004955511 725892 726854 - 102007683 AGCD01066341;XM_005408209 XP_005408266 MODEL 39131808 rrna 5S_rRNA 5S ribosomal RNA 8889608 protein-coding Rxrg retinoid X receptor gamma ENCODES a protein that exhibits identical protein binding (ortholog); molecular condensate scaffold activity (ortholog); nuclear receptor activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); heart development (ortholog); neuron differentiation (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog); melanoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955462 11238963 11281905 + 102005681 AGCD01049388;AGCD01049389;GBDK01322855;XM_005398248;XM_013521352;XM_013521353 XP_005398305;XP_013376806;XP_013376807 MODEL 8774820 protein-coding LOC102025112 olfactory receptor 51T1 NW_004955414 20490013 20494165 + 102025112 AGCD01015376;XM_005380474 XP_005380531 MODEL 9042100 protein-coding Rad9b RAD9 checkpoint clamp component B ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955482 7405520 7459240 + 102023472 AGCD01057466;AGCD01057467;AGCD01057468;GBDF01050748;XM_005403153;XM_005403154;XM_013503652;XM_013503653;XM_013503654;XM_013503655 XP_005403210;XP_005403211;XP_013359106;XP_013359107;XP_013359108;XP_013359109 MODEL 8798066 pseudo LOC102029735 cytochrome c, somatic pseudogene NW_004955415 566764 567068 + 102029735 AGCD01015844 MODEL 8983913 protein-coding Arhgef39 Rho guanine nucleotide exchange factor 39 INVOLVED IN positive regulation of cell migration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955472 633474 636440 + 102010690 AGCD01053344;GBBH01162941;GBDJ01123704;XM_013523038 XP_013378492 MODEL 9013849 ncrna LOC102003674 uncharacterized LOC102003674 NW_004955427 13594699 13599884 + 102003674 AGCD01027253;GBDF01143677;XR_001234373 MODEL 8907832 protein-coding Eif5a eukaryotic translation initiation factor 5A ENCODES a protein that exhibits RNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); cellular response to virus (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 9603800 9608490 - 102021110 AGCD01051519;GBDK01109542;XM_005399521;XM_005399522 XP_005399578;XP_005399579 MODEL 39132937 snorna SNORD35 Small nucleolar RNA SNORD35 9049007 protein-coding Wnt9b Wnt family member 9B ENCODES a protein that exhibits co-receptor binding (ortholog); receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; FOUND IN extracellular region (ortholog) NW_004955478 10816405 10841416 + 102003128 AGCD01056151;AGCD01056152;GBCQ01093789;XM_005402302 XP_005402359 MODEL 8771102 protein-coding Dtd2 D-aminoacyl-tRNA deacylase 2 ENCODES a protein that exhibits Ala-tRNA(Thr) deacylase activity (ortholog); D-aminoacyl-tRNA deacylase activity (ortholog); D-tyrosyl-tRNA(Tyr) deacylase activity (ortholog); INVOLVED IN aminoacyl-tRNA metabolism involved in translational fidelity (ortholog); ASSOCIATED WITH sarcoma (ortholog) NW_004955409 29151779 29160734 + 102011182 AGCD01010253;GBBH01016347;XM_005376956 XP_005377013 MODEL 9018540 protein-coding Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); protein kinase binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Ataxia (ortholog); dilated cardiomyopathy (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear speck (ortholog); plasma membrane (ortholog) NW_004955440 17364996 17497446 - 102006612 AGCD01036569;AGCD01036570;AGCD01036571;AGCD01036572;AGCD01036573;AGCD01036574;AGCD01036575;GBDJ01171361;XM_005390810;XM_005390811 XP_005390867;XP_005390868 MODEL 8776326 protein-coding Dcaf11 DDB1 and CUL4 associated factor 11 INVOLVED IN cognition (ortholog); exploration behavior (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) NW_004955409 36272184 36279985 - 102012168 AGCD01010454;GBBH01034603;XM_005377047;XM_005377048;XM_005377049;XM_013510410 XP_005377104;XP_005377105;XP_005377106;XP_013365864 MODEL 8949287 pseudo LOC102005113 basigin pseudogene NW_004955408 34149587 34150365 + 102005113 AGCD01008895;XM_005376594 MODEL 8828031 protein-coding LOC102009235 signal recognition particle 19 kDa protein NW_004955449 1420800 1421601 - 102009235 AGCD01041800;XM_005393194 XP_005393251 MODEL 626189210 snorna SNORA44 Small nucleolar RNA SNORA44 9012186 pseudo LOC102025816 translation initiation factor IF-2, mitochondrial-like NW_004955424 15769513 15793267 + 102025816 AGCD01024726;AGCD01024727;AGCD01024728;AGCD01024729 MODEL 8904491 pseudo LOC102005454 lupus La protein homolog pseudogene NW_004955412 30675648 30678489 + 102005454 AGCD01013305 MODEL 9046352 protein-coding Banp BTG3 associated nuclear protein ENCODES a protein that exhibits identical protein binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nuclear speck (ortholog) NW_004955541 2169303 2256779 + 102029225 AGCD01071404;AGCD01071405;AGCD01071406;GBDF01122106;XM_005411011;XM_005411012;XM_005411013;XM_005411014;XM_013507967;XM_013507969;XM_013507970 XP_005411068;XP_005411069;XP_005411070;XP_005411071;XP_013363421;XP_013363423;XP_013363424 MODEL 8889042 protein-coding Lrrc34 leucine rich repeat containing 34 INVOLVED IN gene expression (ortholog); telomere maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955420 44454 66222 - 102015015 AGCD01020530;GBBH01149709;XM_005382958;XM_005382959 XP_005383015;XP_005383016 MODEL 9007454 protein-coding Etnppl ethanolamine-phosphate phospho-lyase ENCODES a protein that exhibits ethanolamine-phosphate phospho-lyase activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); ceramide phosphoethanolamine catabolic process (ortholog); gene expression (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog) NW_004955496 1274929 1292802 + 102028103 AGCD01062252;GBDF01054944;XM_005406194 XP_005406251 MODEL 8981356 protein-coding Ppef2 protein phosphatase with EF-hand domain 2 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955474 1758988 1770427 + 102028528 AGCD01054267;AGCD01054268;GBDF01228178;XM_013523094 XP_013378548 MODEL 8794623 protein-coding Shisa3 shisa family member 3 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955443 5367306 5372091 - 102008900 AGCD01038236;GBCQ01012580;XM_005391921;XM_013518028;XM_013518029 XP_005391978;XP_013373482;XP_013373483 MODEL 8772168 protein-coding Trpm6 transient receptor potential cation channel subfamily M member 6 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); magnesium ion transmembrane transport (ortholog); metal ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); nucleus (ortholog) NW_004955512 4179194 4323523 + 102006059 AGCD01066733;AGCD01066734;AGCD01066735;AGCD01066736;AGCD01066737;AGCD01066738;AGCD01066739;AGCD01066740;AGCD01066741;GBDJ01377962;XM_005408321;XM_013506547 XP_005408378;XP_013362001 MODEL 9038088 protein-coding LOC102007688 spermatogenesis-associated protein 31E1-like NW_004955515 2514202 2517200 - 102007688 AGCD01067256;GBDK01098218;XM_005408922;XM_013506865 XP_005408979;XP_013362319 MODEL 8980950 ncrna LOC102012432 uncharacterized LOC102012432 NW_004955418 28369715 28371889 + 102012432 AGCD01019436;GBDF01147816;XR_260592 MODEL 8982399 protein-coding Ctdsp1 CTD small phosphatase 1 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of neurogenesis (ortholog); negative regulation of neuron differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955453 14971276 14976667 - 102010544 AGCD01044879;GBDF01278846;XM_005395647;XM_005395648;XM_005395649 XP_005395704;XP_005395705;XP_005395706 MODEL 8886179 protein-coding LOC102003326 histone H2A type 1-J-like NW_004955465 13124247 13124484 + 102003326 AGCD01050588;XM_005399005 XP_005399062 MODEL 8724298 protein-coding Ccdc51 coiled-coil domain containing 51 ENCODES a protein that exhibits mitochondrial ATP-gated potassium channel activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); mitochondrial potassium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial ATP-gated potassium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955532 500963 509437 - 102025164 AGCD01070127;GBDK01397852;XM_005410149;XM_005410150;XM_013507608 XP_005410206;XP_005410207;XP_013363062 MODEL 8824881 protein-coding Thumpd2 THUMP domain 2 tRNA and snRNA guanosine methyltransferase ENCODES a protein that exhibits U6 snRNA (guanine-N(2))-methyltransferase activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN methyltransferase complex (ortholog); nucleus (ortholog); tRNA methyltransferase complex (ortholog) NW_004955441 7329468 7369957 - 102016851 AGCD01036958;AGCD01036959;AGCD01036960;AGCD01036961;GBDJ01125332;XM_005390906;XM_005390907;XM_013517626;XM_013517627 XP_005390963;XP_005390964;XP_013373080;XP_013373081 MODEL 8788689 protein-coding Pygo1 pygopus family PHD finger 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); hematopoietic progenitor cell differentiation (ortholog); kidney development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955409 446548 459139 + 102020222 AGCD01009148;AGCD01009149;GBBH01036528;GBCB01072777;XM_013510021 XP_013365475 MODEL 8969224 protein-coding LOC102006556 histone H3.1 NW_004955465 13374516 13388289 + 102006556 AGCD01050605;AGCD01050606;AGCD01050607;GBDJ01218778;XM_013521798;XM_013521799 XP_013377252;XP_013377253 MODEL 39133895 misc_rna 7SK 7SK RNA 8968235 protein-coding Fnbp1l formin binding protein 1 like ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN cilium assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955423 1115828 1220316 - 102014145 AGCD01023428;AGCD01023429;AGCD01023430;GBDJ01272685;XM_005385016;XM_005385017;XM_013514438 XP_005385073;XP_005385074;XP_013369892 MODEL 8900059 protein-coding Ctdsp2 CTD small phosphatase 2 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog) NW_004955458 5523548 5549190 - 102013389 AGCD01047497;AGCD01047498;AGCD01047499;GBCB01020492;XM_005397421 XP_005397478 MODEL 8706796 protein-coding LOC102018620 melanoma-associated antigen 8-like NW_004955498 2322033 2323007 - 102018620 AGCD01062784;XM_013505524 XP_013360978 MODEL 8907471 protein-coding LOC102003327 uncharacterized LOC102003327 NW_004955466 5485952 5548346 + 102003327 AGCD01050881;AGCD01050882;GBDF01043768;XM_005399132;XM_005399133;XM_005399134;XM_005399135;XM_013522017;XM_013522018 XP_005399189;XP_005399190;XP_005399191;XP_005399192;XP_013377471;XP_013377472 MODEL 8752893 protein-coding Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase ENCODES a protein that exhibits p53 binding (ortholog); protease binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endosome membrane (ortholog) NW_004955481 9718369 9788048 - 102008852 AGCD01057112;AGCD01057113;AGCD01057114;AGCD01057115;AGCD01057116;GBDF01089520;XM_005402854;XM_005402855;XM_005402858;XM_005402862 XP_005402911;XP_005402912;XP_005402915;XP_005402919 MODEL 9024939 protein-coding LOC102012844 polycystic kidney disease protein 1-like 2 NW_004955413 408570 412526 + 102012844 AGCD01013464;GBDJ01203527;XM_005378678;XM_013511472 XP_005378735;XP_013366926 MODEL 8941077 protein-coding LOC102021961 olfactory receptor 51A4-like NW_004955414 20597523 20619093 - 102021961 AGCD01015382;AGCD01015383;AGCD01015384;XM_005380063 XP_005380120 MODEL 39131809 rrna 5S_rRNA 5S ribosomal RNA 9030578 protein-coding Chgb chromogranin B ENCODES a protein that exhibits chloride channel activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); prostate cancer (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog); secretory granule membrane (ortholog) NW_004955415 16311769 16324962 + 102014891 AGCD01016376;GBDI01355443;XM_005380843 XP_005380900 MODEL 8931069 protein-coding Rxylt1 ribitol xylosyltransferase 1 ENCODES a protein that exhibits ribitol beta-1,4-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); congenital muscular dystrophy-dystroglycanopathy type A10 (ortholog); genetic disease (ortholog); FOUND IN catalytic complex (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955458 10649364 10674913 + 102007862 AGCD01047698;AGCD01047699;GBCQ01005457;GBDJ01181625;XM_013521008 XP_013376462 MODEL 8799087 protein-coding LOC102011197 vomeronasal type-1 receptor 90-like NW_004955414 14915467 14916408 - 102011197 AGCD01015162;XM_005380438 XP_005380495 MODEL 8835822 ncrna LOC102025114 uncharacterized LOC102025114 NW_004955415 29659897 29684279 - 102025114 AGCD01016654;GBCE01080812;XR_001233189;XR_001233190;XR_260322 MODEL 8743251 pseudo LOC102024033 60S ribosome subunit biogenesis protein NIP7 homolog pseudogene NW_004955428 4681870 4684650 - 102024033 AGCD01027700 MODEL 8735670 pseudo LOC102006187 serine/threonine/tyrosine-interacting protein pseudogene NW_004955588 34411 37242 - 102006187 AGCD01076076;AGCD01076077 MODEL 8720435 ncrna LOC102010374 uncharacterized LOC102010374 NW_004955487 1473174 1486730 + 102010374 AGCD01059246;GBDF01209774;XR_263982 MODEL 8785570 pseudo LOC102003677 protein phosphatase 1 regulatory subunit 42-like NW_004955511 3024029 3025033 - 102003677 AGCD01066439 MODEL 8936003 protein-coding Ino80b INO80 complex subunit B INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN Ino80 complex (ortholog); nuclear body (ortholog); nucleolus (ortholog) NW_004955424 11324741 11327466 - 102021896 AGCD01024563;GBCE01116801;XM_013514657 XP_013370111 MODEL 8737172 protein-coding Wrap53 WD repeat containing antisense to TP53 ENCODES a protein that exhibits histone binding (ortholog); identical protein binding (ortholog); protein carrier activity (ortholog); INVOLVED IN Cajal body organization (ortholog); positive regulation of DNA repair (ortholog); positive regulation of double-strand break repair (ortholog); ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); autosomal recessive dyskeratosis congenita 3 (ortholog); Body Weight (ortholog); FOUND IN Cajal body (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955467 9225506 9240756 - 102006011 AGCD01051484;GBDK01319101;XM_005399465;XM_013522145 XP_005399522;XP_013377599 MODEL 8830029 protein-coding Commd5 COMM domain containing 5 INVOLVED IN positive regulation of cell growth (ortholog); positive regulation of epithelial cell differentiation (ortholog); proximal tubule morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955454 3322253 3324313 - 102017841 AGCD01045066;GBDK01146066;XM_005395929;XM_005395930 XP_005395986;XP_005395987 MODEL 8716362 protein-coding Tac4 tachykinin precursor 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); substance K receptor binding (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); negative regulation of sensory perception of pain (ortholog); negative regulation of systemic arterial blood pressure (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955451 11755645 11763281 + 102018879 AGCD01043364;GBBH01091448;XM_005394188 XP_005394245 MODEL 10167908 ncrna LOC106147430 uncharacterized LOC106147430 NW_004955558 1217199 1222167 + 106147430 AGCD01073422;AGCD01073423;GBDK01433447;XR_001232334 MODEL 8902761 protein-coding Ptdss1 phosphatidylserine synthase 1 ENCODES a protein that exhibits L-serine-phosphatidylcholine phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955417 12268908 12327127 + 102005804 AGCD01018160;AGCD01018161;AGCD01018162;GBDF01049061;XM_005381833 XP_005381890 MODEL 39133313 snrna U4 U4 spliceosomal RNA 39133896 misc_rna 7SK 7SK RNA 8718142 protein-coding LOC102025817 taste receptor type 2 member 1-like NW_004955504 6903932 6904825 - 102025817 AGCD01064930;XM_005407094 XP_005407151 MODEL 10313469 ncrna LOC106148523 uncharacterized LOC106148523 NW_004955423 388835 415862 - 106148523 AGCD01023412;GBDK01261293;XR_001234054 MODEL 8802989 protein-coding Bap1 BRCA1 associated deubiquitinase 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cysteine-type deubiquitinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); common myeloid progenitor cell proliferation (ortholog); erythrocyte differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); adrenocortical carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955430 2391970 2400645 - 102015750 AGCD01029165;GBDF01009197;XM_005387315;XM_013515572 XP_005387372;XP_013371026 MODEL 8726016 pseudo LOC102007689 DNA-3-methyladenine glycosylase pseudogene NW_004955516 1140332 1141187 + 102007689 AGCD01067413 MODEL 8986160 protein-coding LOC102012845 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10861527 10905757 - 102012845 AGCD01051587;GBCE01022349;XM_013522159;XM_013522160 XP_013377613;XP_013377614 MODEL 9061429 protein-coding Cacng1 calcium voltage-gated channel auxiliary subunit gamma 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); sarcoplasmic reticulum calcium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); malignant hyperthermia (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog) NW_004955478 6295046 6305625 + 102008723 AGCD01055891;AGCD01055892;GBCB01005162;XM_005402150 XP_005402207 MODEL 8834284 pseudo LOC102005116 solute carrier family 25 member 36 pseudogene NW_004955459 839058 893923 - 102005116 AGCD01047955;AGCD01047956;AGCD01047957 MODEL 8935282 ncrna LOC102009239 uncharacterized LOC102009239 NW_004955586 997656 1002493 + 102009239 AGCD01076049;GBDJ01242970;XR_265115 MODEL 8718979 protein-coding Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ENCODES a protein that exhibits alpha-mannosidase activity (ortholog); mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); misfolded protein binding (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); positive regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955421 8196631 8225561 - 102029754 AGCD01021799;AGCD01021800;GBDI01139845;GBDK01133751;XM_005383919;XM_013513728 XP_005383976;XP_013369182 MODEL 730469090 snorna SNORA44 Small nucleolar RNA SNORA44 39131455 protein-coding PYGO1 pygopus family PHD finger 1 8858183 protein-coding Slc16a2 solute carrier family 16 member 2 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); identical protein binding (ortholog); thyroid hormone transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); amino acid metabolic process (ortholog); hormone transport (ortholog); ASSOCIATED WITH Allan-Herndon-Dudley syndrome (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955562 305850 455764 + 102023963 AGCD01073921;AGCD01073922;AGCD01073923;AGCD01073924;AGCD01073925;GBDK01218930;XM_005413081 XP_005413138 MODEL 39132581 rrna 5S_rRNA 5S ribosomal RNA 39133897 misc_rna 7SK 7SK RNA 8825383 protein-coding Radil Rap associating with DIL domain INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN microtubule (ortholog); protein-containing complex (ortholog) NW_004955460 10906944 10990369 + 102005905 AGCD01048623;AGCD01048624;AGCD01048625;AGCD01048626;GBDF01126679;XM_005397849;XM_013521246 XP_005397906;XP_013376700 MODEL 8796371 protein-coding Shisa4 shisa family member 4 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog) NW_004955406 37959156 37961972 + 102019664 AGCD01006581;GBCB01005287;GBCE01115144;XM_013522274 XP_013377728 MODEL 8895184 protein-coding Lrrc36 leucine rich repeat containing 36 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog) NW_004955484 9254049 9310033 - 102005597 AGCD01058413;AGCD01058414;GBDI01076538;XM_005403659;XM_013503895 XP_005403716;XP_013359349 MODEL 39134228 snorna SNORD36 Small nucleolar RNA SNORD36 39131810 rrna 5S_rRNA 5S ribosomal RNA 8974771 pseudo LOC102012433 calcyclin-binding protein pseudogene NW_004955419 25409135 25411025 - 102012433 AGCD01020385 MODEL 8852638 protein-coding Ets1 ETS proto-oncogene 1, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); cell motility (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN altered p53 signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); celiac disease (ortholog); coarctation of the aorta (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 29433730 29602389 - 102010567 AGCD01013279;AGCD01013280;AGCD01013281;AGCD01013282;AGCD01013283;GBCC01027243;XM_005378524;XM_005378525;XM_005378526;XM_005378527;XM_005378529;XM_013511111;XM_013511112;XM_013511113 XP_005378581;XP_005378582;XP_005378583;XP_005378584;XP_005378586;XP_013366565;XP_013366566;XP_013366567 MODEL 8787693 protein-coding Chi3l1 chitinase 3 like 1 ENCODES a protein that exhibits chitin binding (ortholog); chitinase activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); inflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955406 39195101 39201808 - 102008059 AGCD01006621;GBBH01100979;XM_005375251 XP_005375308 MODEL 8967469 protein-coding Dthd1 death domain containing 1 ASSOCIATED WITH fundus dystrophy (ortholog); Norum disease (ortholog); optic atrophy (ortholog) NW_004955443 10444916 10501215 - 102012032 AGCD01038377;AGCD01038378;GBDI01000525;XM_005392015 XP_005392072 MODEL 9044392 protein-coding LOC102011198 signal-regulatory protein beta-1 NW_004955415 12897443 12955738 - 102011198 AGCD01016236;AGCD01016237;GBCE01043667;XM_013512246;XM_013512247;XM_013512248 XP_013367700;XP_013367701;XP_013367702 MODEL 8957830 protein-coding LOC102006191 zinc finger protein 449-like NW_004955602 489329 501914 + 102006191 AGCD01076788;AGCD01076789;XM_013510075 XP_013365529 MODEL 8746093 protein-coding Dcaf12 DDB1 and CUL4 associated factor 12 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN regulation of autophagy (ortholog); T cell activation (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955472 1943477 1974938 + 102006238 AGCD01053424;AGCD01053425;GBCQ01123987;GBDF01044441;XM_005401095 XP_005401152 MODEL 8749442 protein-coding Thumpd3 THUMP domain 3 tRNA guanosine methyltransferase ENCODES a protein that exhibits tRNA (guanine(6)-N2)-methyltransferase activity (ortholog); tRNA (guanine(7)-N2)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955561 933168 956457 + 102028693 AGCD01073827;GBDI01041484;XM_005413004;XM_005413005 XP_005413061;XP_005413062 MODEL 8972191 protein-coding Ino80c INO80 complex subunit C INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN fibrillar center (ortholog); Ino80 complex (ortholog); MLL1 complex (ortholog) NW_004955402 22189943 22210315 - 102007288 AGCD01000603;AGCD01000604;GBDI01168667;XM_005372802;XM_013509834;XM_013509865 XP_005372859;XP_013365288;XP_013365319 MODEL 8779541 protein-coding Commd6 COMM domain containing 6 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog) NW_004955404 31473054 31487169 + 102022776 AGCD01004020;GBDF01127489;XM_005374177;XM_013516578;XM_013516579 XP_005374234;XP_013372032;XP_013372033 MODEL 8840680 protein-coding Ctdspl CTD small phosphatase like INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog) NW_004955421 4705664 4831463 + 102009724 AGCD01021700;AGCD01021701;AGCD01021702;GBBH01126080;GBDK01131136;XM_005383711 XP_005383768 MODEL 8829036 protein-coding LOC102018625 leucine-rich repeat-containing protein 37A2-like NW_004955506 6704785 6744679 + 102018625 AGCD01065442;AGCD01065443;AGCD01065444;AGCD01065445;AGCD01065446;AGCD01065447;AGCD01065448;AGCD01065449;AGCD01065450;AGCD01065451;GBBH01032482;GBCE01006258;XM_005407497 XP_005407554 MODEL 8730585 protein-coding LOC102029738 uncharacterized protein CXorf49 homolog NW_004955475 11204885 11208059 - 102029738 AGCD01055144;GBDF01225977;XM_013502809 XP_013358263 MODEL 8728744 protein-coding Fnbp4 formin binding protein 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 613817 641691 + 102006145 AGCD01022422;AGCD01022423;AGCD01022424;GBCB01056703;GBDJ01016812;XM_013514047 XP_013369501 MODEL 8950390 protein-coding Pnrc2 proline rich nuclear receptor coactivator 2 INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); P-body (ortholog) NW_004955452 3826337 3829896 + 102024081 AGCD01043949;GBCQ01004889;XM_005394788 XP_005394845 MODEL 9054459 protein-coding LOC102021963 uncharacterized LOC102021963 NW_004955470 874205 883508 - 102021963 AGCD01052624;XM_005400823 XP_005400880 MODEL 9027952 protein-coding LOC102025818 uncharacterized LOC102025818 NW_004955505 2242542 2279429 + 102025818 AGCD01064988;AGCD01064989;AGCD01064990;XM_013505920 XP_013361374 MODEL 9043529 protein-coding Trpm7 transient receptor potential cation channel subfamily M member 7 ENCODES a protein that exhibits actin binding (ortholog); calcium channel activity (ortholog); kinase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoma (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); neuronal cell body (ortholog) NW_004955409 3690722 3787139 + 102028060 AGCD01009259;AGCD01009260;GBDF01237858;XM_005376661;XM_005376664;XM_005376665 XP_005376718;XP_005376721;XP_005376722 MODEL 8785871 protein-coding Ppfia1 PPFI scaffold protein A1 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cortical microtubule organization (ortholog); negative regulation of protein localization to plasma membrane (ortholog); negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN axon (ortholog); cell cortex (ortholog); cytosol (ortholog) NW_004955422 15892945 15998786 - 102019607 AGCD01022883;AGCD01022884;AGCD01022885;AGCD01022886;GBDF01043150;GBDJ01234038;XM_013514113 XP_013369567 MODEL 8843523 protein-coding LOC102025115 heat shock factor protein 3-like NW_004955475 5498275 5555299 - 102025115 AGCD01054919;AGCD01054920;AGCD01054921;GBDF01165225;XM_013502808 XP_013358262 MODEL 8908952 protein-coding Ccdc54 coiled-coil domain containing 54 NW_004955427 8082515 8083798 + 102010389 AGCD01027063;GBDF01046712;XM_005386345 XP_005386402 MODEL 10113412 ncrna LOC106148524 uncharacterized LOC106148524 NW_004955423 19069992 19137215 + 106148524 AGCD01023884;AGCD01023885;AGCD01023886;GBDF01234160;XR_001234055 MODEL 8976735 protein-coding Rybp RING1 and YY1 binding protein ENCODES a protein that exhibits DNA binding (ortholog); nucleic acid binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); brachydactyly (ortholog); Congenital Microtia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 15728778 15803150 + 102005268 AGCD01021991;AGCD01021992;GBDF01118383;GBDI01356522;XM_013513794 XP_013369248 MODEL 8866975 pseudo LOC102003679 glutamine synthetase pseudogene NW_004955431 4833847 4835235 + 102003679 AGCD01030014 MODEL 8768937 protein-coding LOC102006557 putative olfactory receptor 2W6 NW_004955465 13441807 13444827 + 102006557 AGCD01050609;XM_005399012 XP_005399069 MODEL 39134459 misc_rna 7SK 7SK RNA 9032996 pseudo LOC102010378 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955422 11267452 11268307 - 102010378 AGCD01022753 MODEL 8954275 ncrna LOC102005457 uncharacterized LOC102005457 NW_004955413 21113074 21147758 + 102005457 AGCD01014246;AGCD01014247;GBBH01122379;XR_001232964;XR_001232965;XR_001232966 MODEL 9055945 protein-coding Wrap73 WD repeat containing, antisense to TP73 INVOLVED IN mitotic spindle assembly (ortholog); positive regulation of non-motile cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) NW_004955486 7992684 8006121 + 102026530 AGCD01059144;AGCD01059145;GBDF01119400;XM_005404146;XM_005404147 XP_005404203;XP_005404204 MODEL 8919299 protein-coding Tacc1 transforming acidic coiled-coil containing protein 1 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); nuclear glucocorticoid receptor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cerebral cortex development (ortholog); interkinetic nuclear migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); epilepsy (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); nucleus (ortholog) NW_004955463 14314201 14409848 + 102025554 AGCD01049907;AGCD01049908;GBBH01076350;GBDK01232861;XM_013521504 XP_013376958 MODEL 39133316 snrna U4 U4 spliceosomal RNA 10229531 protein-coding LOC106147431 cytoplasmic tRNA 2-thiolation protein 1-like NW_004955558 1391498 1394494 + 106147431 AGCD01073440;GBDJ01420841;GBDK01308643;XM_013508902 XP_013364356 MODEL 8960217 protein-coding Ptdss2 phosphatidylserine synthase 2 ENCODES a protein that exhibits CDP-diacylglycerol-serine O-phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955476 11554962 11585574 - 102022914 AGCD01055466;GBDJ01080587;XM_005401863;XM_013502927;XM_013502928;XM_013502929;XM_013502930;XM_013502931;XM_013502932 XP_005401920;XP_013358381;XP_013358382;XP_013358383;XP_013358384;XP_013358385;XP_013358386 MODEL 8741987 pseudo LOC102003333 60S ribosomal protein L27 pseudogene NW_004955413 15155101 15155528 + 102003333 AGCD01014066 MODEL 730469088 snorna SNORA44 Small nucleolar RNA SNORA44 39131382 protein-coding PYGO2 pygopus family PHD finger 2 8723653 protein-coding Eif5a2 eukaryotic translation initiation factor 5A2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955420 1032801 1044393 - 102022604 AGCD01020560;AGCD01020561;GBDI01317060;GBDJ01306217;XM_013513425 XP_013368879 MODEL 8866514 protein-coding Ctdspl2 CTD small phosphatase like 2 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); embryonic skeletal system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN nucleus (ortholog) NW_004955416 10970487 11046179 + 102015840 AGCD01017169;AGCD01017170;AGCD01017171;GBDF01158268;XM_005381416;XM_005381418;XM_013512468 XP_005381473;XP_005381475;XP_013367922 MODEL 8909214 protein-coding LOC102024035 acyl-CoA desaturase 1-like NW_004955507 6193698 6208835 + 102024035 AGCD01065697;XM_005407697;XM_005407698 XP_005407754;XP_005407755 MODEL 8704601 protein-coding Bard1 BRCA1 associated RING domain 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to ionizing radiation (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-B complex (ortholog); BRCA1-BARD1 complex (ortholog) NW_004955457 1187942 1258475 + 102020764 AGCD01046721;AGCD01046722;GBDF01159748;XM_005396916 XP_005396973 MODEL 39131659 rrna 5S_rRNA 5S ribosomal RNA 9053410 ncrna LOC102007690 uncharacterized LOC102007690 NW_004955435 16245726 16250388 - 102007690 AGCD01033304;GBDF01049547;XR_261703 MODEL 8708410 ncrna LOC102012439 uncharacterized LOC102012439 NW_004955421 24954942 25002542 - 102012439 AGCD01022225;AGCD01022226;AGCD01022227;GBCQ01157706;XR_001233829;XR_260827 MODEL 8847392 protein-coding Arhgef4 Rho guanine nucleotide exchange factor 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN filopodium assembly (ortholog); lamellipodium assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); melanoma (ortholog) NW_004955459 321683 534108 + 102015179 AGCD01047931;AGCD01047932;AGCD01047933;AGCD01047934;AGCD01047935;AGCD01047936;GBDJ01033283;XM_005397549;XM_005397550;XM_005397552;XM_013521054 XP_005397606;XP_005397607;XP_005397609;XP_013376508 MODEL 8953689 pseudo LOC102011201 40S ribosomal protein S27-like pseudogene NW_004955477 3377398 3380933 - 102011201 AGCD01055553 MODEL 9000039 ncrna LOC102005117 uncharacterized LOC102005117 NW_004955460 7231987 7232762 - 102005117 AGCD01048479;GBDF01013953;XR_001236514;XR_263035 MODEL 8865214 protein-coding Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN eye blink reflex (ortholog); membrane depolarization (ortholog); membrane hyperpolarization (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 10 (ortholog); childhood absence epilepsy (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell surface (ortholog); cerebellar mossy fiber (ortholog) NW_004955413 23136369 23248231 - 102021115 AGCD01014328;AGCD01014329;XM_005379165 XP_005379222 MODEL 8773039 pseudo LOC102009242 nucleolar and spindle-associated protein 1 pseudogene NW_004955402 63057108 63065990 + 102009242 AGCD01001653 MODEL 8828854 protein-coding Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); positive regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955422 26243034 26271849 + 102015325 AGCD01023283;AGCD01023284;GBDI01078947;XM_005384804 XP_005384861 MODEL 8814779 protein-coding Rfk riboflavin kinase ENCODES a protein that exhibits riboflavin kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); reactive oxygen species metabolic process (ortholog); riboflavin metabolic process (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Prostatic Neoplasms (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) NW_004955512 2889265 2898195 + 102029315 AGCD01066691;AGCD01066692;GBBH01065333;GBDF01001741;XM_005408308 XP_005408365 MODEL 8991751 ncrna LOC102018626 uncharacterized LOC102018626 NW_004955507 2802458 2809081 + 102018626 AGCD01065594;GBDF01153258;XR_264374 MODEL 8724047 protein-coding Ino80d INO80 complex subunit D INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Ino80 complex (ortholog) NW_004955457 8913625 8983859 + 102017955 AGCD01046922;AGCD01046923;AGCD01046924;GBDK01343093;XM_005397001;XM_005397003 XP_005397058;XP_005397060 MODEL 8818691 protein-coding Slc16a3 solute carrier family 16 member 3 ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); lactate:proton symporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate catabolic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); lateral plasma membrane (ortholog) NW_004955506 935783 945014 - 102013105 AGCD01065241;GBBH01139889;XM_005407207;XM_013506039;XM_013506040;XM_013506041;XM_013506042 XP_005407264;XP_013361493;XP_013361494;XP_013361495;XP_013361496 MODEL 39133898 misc_rna 7SK 7SK RNA 9064923 protein-coding LOC102029740 sperm flagellar protein 1-like NW_004955477 10888123 10894201 - 102029740 AGCD01055709;GBDF01047882;XM_013503045;XM_013503047;XM_013503048 XP_013358499;XP_013358501;XP_013358502 MODEL 9024315 protein-coding Lrrc38 leucine rich repeat containing 38 ENCODES a protein that exhibits potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) NW_004955527 4265027 4288222 + 102021040 AGCD01069501;AGCD01069502;GBBH01135094;GBCB01125691;XM_013507425 XP_013362879 MODEL 8866999 protein-coding Rae1 ribonucleic acid export 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN regulation of mitotic spindle organization (ortholog); FOUND IN fibrillar center (ortholog); mitotic spindle pole (ortholog); nuclear envelope (ortholog) NW_004955445 2069791 2084210 - 102005190 AGCD01039350;GBCE01074921;XM_005392255 XP_005392312 MODEL 8857598 protein-coding LOC102012851 late histone H2B.L4-like NW_004955413 862577 885893 - 102012851 AGCD01013492;AGCD01013493;GBDI01162044;XM_013511494 XP_013366948 MODEL 8977075 protein-coding Ets2 ETS proto-oncogene 2, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN ectodermal cell fate commitment (ortholog); mesoderm development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955407 37747152 37764170 + 102020309 AGCD01007785;GBDF01304491;XM_005375762 XP_005375819 MODEL 8990611 protein-coding Trpm8 transient receptor potential cation channel subfamily M member 8 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955453 2185534 2265261 - 102004035 AGCD01044623;AGCD01044624;GBDF01103492;XM_005395332 XP_005395389 MODEL 8780673 protein-coding LOC102006193 PRAME family member 22-like NW_004955615 261822 264278 + 102006193 AGCD01077252;XM_013510140 XP_013365594 MODEL 8979645 protein-coding Chic1 cysteine rich hydrophobic domain 1 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955591 581415 659840 + 102029575 AGCD01076275;AGCD01076276;AGCD01076277;GBDF01066444;XM_005414595;XM_005414596;XM_005414597 XP_005414652;XP_005414653;XP_005414654 MODEL 8960089 protein-coding Dcaf12l2 DDB1 and CUL4 associated factor 12 like 2 NW_004955473 8744863 8746589 + 102016914 AGCD01054058;XM_005401272 XP_005401329 MODEL 8990949 protein-coding Ccdc57 coiled-coil domain containing 57 INVOLVED IN axoneme assembly (ortholog); centriole replication (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955506 954473 1060703 + 102014693 AGCD01065242;GBCE01129993;XM_013506055;XM_013506056;XM_013506057;XM_013506058 XP_013361509;XP_013361510;XP_013361511;XP_013361512 MODEL 8844354 protein-coding Ppfia2 PPFI scaffold protein A2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); structural constituent of postsynaptic density (ortholog); structural constituent of presynapse (ortholog); INVOLVED IN dense core granule cytoskeletal transport (ortholog); regulation of dendritic spine development (ortholog); regulation of dendritic spine morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955405 19837749 20291666 - 102024420 AGCD01005047;AGCD01005048;AGCD01005049;AGCD01005050;AGCD01005051;AGCD01005052;AGCD01005053;AGCD01005054;GBCE01046938;XM_005374377;XM_005374388;XM_013517986;XM_013517988;XM_013517990;XM_013517995;XM_013518004;XM_013518006;XM_013518011;XM_013518014;XM_013518017;XM_013518024;XM_013518025 XP_005374434;XP_005374445;XP_013373440;XP_013373442;XP_013373444;XP_013373449;XP_013373458;XP_013373460;XP_013373465;XP_013373468;XP_013373471;XP_013373478;XP_013373479 MODEL 8998774 protein-coding Thy1 Thy-1 cell surface antigen ENCODES a protein that exhibits enzyme binding (ortholog); GPI anchor binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Reperfusion Injury (ortholog); FOUND IN apical plasma membrane (ortholog); axolemma (ortholog); cell surface (ortholog) NW_004955412 20480284 20484958 - 102008928 AGCD01013009;GBDI01065511;XM_005378342 XP_005378399 MODEL 8719766 protein-coding Commd7 COMM domain containing 7 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955422 28454984 28464885 + 102007443 AGCD01023354;AGCD01023355;AGCD01023356;GBCB01020579;GBCQ01006048;XM_013514154 XP_013369608 MODEL 39132585 rrna 5S_rRNA 5S ribosomal RNA 8863930 protein-coding Fndc1 fibronectin type III domain containing 1 INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); regulation of protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) NW_004955439 3251851 3356679 - 102009106 AGCD01035671;AGCD01035672;AGCD01035673;GBDI01054738;GBDJ01019727;XM_005390511;XM_013517412 XP_005390568;XP_013372866 MODEL 8885404 pseudo LOC102005120 centromere protein H pseudogene NW_004955462 13884190 13890236 - 102005120 AGCD01049434 MODEL 8961638 protein-coding Shisa5 shisa family member 5 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); WW domain binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog) NW_004955532 535992 544542 - 102027566 AGCD01070130;GBBH01033742;GBCB01120615;XM_013507610;XM_013507611 XP_013363064;XP_013363065 MODEL 8743958 protein-coding LOC102003334 uncharacterized LOC102003334 NW_004955470 2780581 2789641 + 102003334 AGCD01052682;GBDF01222195;XM_005400615;XM_005400616;XM_005400617;XM_005400618 XP_005400672;XP_005400673;XP_005400674;XP_005400675 MODEL 8877743 protein-coding Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955406 23329400 23401282 - 102005222 AGCD01006171;GBDJ01317528;XM_005375059;XM_013521605 XP_005375116;XP_013377059 MODEL 8781275 protein-coding Poc1a POC1 centriolar protein A INVOLVED IN bone development (ortholog); growth plate cartilage chondrocyte development (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH argininosuccinic aciduria (ortholog); astigmatism (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955532 3707680 3790565 - 102010197 AGCD01070295;AGCD01070296;AGCD01070297;AGCD01070298;GBBH01006023;GBDF01155240;XM_013507661;XM_013507662;XM_013507663;XM_013507664 XP_013363115;XP_013363116;XP_013363117;XP_013363118 MODEL 8813192 ncrna LOC102025820 uncharacterized LOC102025820 NW_004955427 24791667 24794509 - 102025820 AGCD01027521;AGCD01027522;GBDK01316391;XR_261288 MODEL 10147453 ncrna LOC106148525 uncharacterized LOC106148525 NW_004955423 12635509 12645298 - 106148525 AGCD01023722;AGCD01023723;GBDF01278423;XR_001234056;XR_001234057 MODEL 10102463 protein-coding Ctf1 cardiotrophin 1 ENCODES a protein that exhibits cytokine activity (ortholog); leukemia inhibitory factor receptor binding (ortholog); INVOLVED IN cardiac muscle cell apoptotic process (ortholog); cardiac muscle hypertrophy (ortholog); leukemia inhibitory factor signaling pathway (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog) NW_004955493 7735996 7737559 + 106146727 AGCD01061222;GBCE01176310;GBDI01227883;XM_013504887 XP_013360341 MODEL 8772156 protein-coding LOC102003680 uncharacterized LOC102003680 NW_004955513 4114603 4116964 + 102003680 AGCD01066920;GBDK01076605;XM_013506579 XP_013362033 MODEL 39134460 misc_rna 7SK 7SK RNA 9052009 ncrna LOC102010381 uncharacterized LOC102010381 NW_004955495 7993126 7997095 - 102010381 AGCD01062174;GBCQ01010353;XR_264169 MODEL 8974411 protein-coding Dtl denticleless E3 ubiquitin protein ligase adapter ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955406 5256057 5299573 - 102023869 AGCD01005718;GBDF01043531;XM_005374751;XM_013520188;XM_013520193 XP_005374808;XP_013375642;XP_013375647 MODEL 9067035 protein-coding Etv1 ETS variant transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); mechanosensory behavior (ortholog); muscle organ development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colorectal Neoplasms (ortholog); esophageal cancer (ortholog) NW_004955410 17445496 17535856 - 102018368 AGCD01010989;GBDF01182370;XM_013510658;XM_013510659;XM_013510660;XM_013510662;XM_013510663 XP_013366112;XP_013366113;XP_013366114;XP_013366116;XP_013366117 MODEL 8825018 protein-coding Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH childhood absence epilepsy (ortholog); macular degeneration (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite (ortholog); excitatory synapse (ortholog) NW_004955493 2742096 2841353 + 102024018 AGCD01060962;AGCD01060963;AGCD01060964;AGCD01060965;AGCD01060966;AGCD01060967;AGCD01060968;AGCD01060969;XM_005405105 XP_005405162 MODEL 8931047 protein-coding Rflnb refilin B ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle organization (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament bundle (ortholog) NW_004955481 2102576 2107947 - 102006457 AGCD01056866;GBCB01008384;GBDK01281227;XM_013503522 XP_013358976 MODEL 730469474 snorna SNORA44 Small nucleolar RNA SNORA44 8813158 protein-coding Pym1 PYM1 exon junction complex associated factor ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN exon-exon junction complex disassembly (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exon-exon junction complex (ortholog) NW_004955458 3499217 3515108 - 102024190 AGCD01047310;AGCD01047311;AGCD01047312;AGCD01047313;AGCD01047314;GBBH01187590;GBDI01138449;XM_005397268 XP_005397325 MODEL 8706988 protein-coding Pten phosphatase and tensin homolog ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult behavior (ortholog); angiogenesis (ortholog); apoptotic process (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955425 5007811 5091829 - 102026655 AGCD01025329;AGCD01025330;AGCD01025331;AGCD01025332;GBDJ01081006;XM_013514767 XP_013370221 MODEL 39133899 misc_rna 7SK 7SK RNA 8747254 pseudo LOC102025116 phosphoglycerate kinase 2-like NW_004955416 1358051 1359301 - 102025116 AGCD01016834 MODEL 8833817 protein-coding Eif5b eukaryotic translation initiation factor 5B ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); translation initiation factor activity (ortholog); INVOLVED IN regulation of translational initiation (ortholog); ribosome assembly (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955470 5622128 5676533 + 102012631 AGCD01052756;AGCD01052757;AGCD01052758;GBDF01004389;XM_005400747 XP_005400804 MODEL 39131660 rrna 5S_rRNA 5S ribosomal RNA 8977235 protein-coding Ryk receptor like tyrosine kinase ENCODES a protein that exhibits ATP binding (ortholog); frizzled binding (ortholog); protein kinase activity (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); chemorepulsion of dopaminergic neuron axon (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cleft palate (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955501 4360051 4419083 + 102024706 AGCD01064128;AGCD01064129;GBCE01055771;XM_005406801;XM_013505792;XM_013505793 XP_005406858;XP_013361246;XP_013361247 MODEL 8972701 protein-coding Barhl1 BarH like homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN midbrain development (ortholog); negative regulation of neuron apoptotic process (ortholog); neuron migration (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Hearing Loss (ortholog); high grade glioma (ortholog); FOUND IN nucleus (ortholog) NW_004955513 1955906 1970110 + 102022526 AGCD01066866;AGCD01066867;GBBH01063530;GBDJ01269024;XM_013506597 XP_013362051 MODEL 8941435 protein-coding Lrrc39 leucine rich repeat containing 39 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955435 4900976 4961310 - 102003902 AGCD01032861;AGCD01032862;AGCD01032863;AGCD01032864;AGCD01032865;AGCD01032866;GBBH01082390;XM_005388794;XM_013516440 XP_005388851;XP_013371894 MODEL 8934086 protein-coding LOC102012852 olfactory receptor 52K1-like NW_004955414 19929257 19930261 - 102012852 AGCD01015343;XM_005380042 XP_005380099 MODEL 8870123 protein-coding Dele1 DAP3 binding cell death enhancer 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular response to stress (ortholog); DNA damage response (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955415 11851023 11869905 - 102030065 AGCD01016178;GBDK01238175;XM_005380717;XM_013512317;XM_013512318;XM_013512319;XM_013512320 XP_005380774;XP_013367771;XP_013367772;XP_013367773;XP_013367774 MODEL 9028704 protein-coding LOC102005458 zinc finger protein 793 NW_004955468 1948677 2003834 + 102005458 AGCD01051789;AGCD01051790;AGCD01051791;AGCD01051792;AGCD01051793;GBDF01306191;XM_005399907;XM_005399908;XM_005399911;XM_013522326;XM_013522327;XM_013522328 XP_005399964;XP_005399965;XP_005399968;XP_013377780;XP_013377781;XP_013377782 MODEL 9017796 protein-coding LOC102021966 uncharacterized LOC102021966 NW_004955476 11530073 11534189 + 102021966 AGCD01055464;AGCD01055465;GBCB01109792;XM_005401860;XR_263647 XP_005401917 MODEL 9020582 protein-coding Cth cystathionine gamma-lyase ENCODES a protein that exhibits cystathionine gamma-lyase activity (ortholog); identical protein binding (ortholog); L-cystine L-cysteine-lyase (deaminating) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glutathione metabolic process (ortholog); hydrogen sulfide biosynthetic process (ortholog); PARTICIPATES IN cystathioninuria pathway; cysteine metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); cataract (ortholog); FOUND IN cytosol (ortholog) NW_004955423 21542587 21567935 - 102005725 AGCD01023945;GBCQ01034035;XM_005385247 XP_005385304 MODEL 8962398 protein-coding Wrn WRN RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 3'-5' exonuclease activity (ortholog); 3'-flap-structured DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to gamma radiation (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); anxiety disorder (ortholog); FOUND IN centrosome (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955463 7495243 7633532 + 102030614 AGCD01049734;AGCD01049735;AGCD01049736;AGCD01049737;AGCD01049738;AGCD01049739;AGCD01049740;AGCD01049741;GBDF01144959;XM_005398387;XM_005398388;XM_005398389;XM_005398390;XM_013521530 XP_005398444;XP_005398445;XP_005398446;XP_005398447;XP_013376984 MODEL 39133318 snrna U4 U4 spliceosomal RNA 8859237 protein-coding LOC102009244 high mobility group protein B1-like NW_004957564 9 553 + 102009244 AGCD01080960;XM_005415232 XP_005415289 MODEL 8845125 protein-coding LOC102018628 olfactory receptor 8K3-like NW_004955511 1357599 1358540 + 102018628 AGCD01066365;XM_013506373 XP_013361827 MODEL 10352396 protein-coding LOC106147434 kallikrein-4-like NW_004955559 28145 63909 + 106147434 AGCD01073534;AGCD01073535;AGCD01073536;AGCD01073537;AGCD01073538;AGCD01073539;AGCD01073540;XM_013508938 XP_013364392 MODEL 8902944 protein-coding Tacc2 transforming acidic coiled-coil containing protein 2 ENCODES a protein that exhibits nuclear receptor binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955477 338990 552100 + 102016051 AGCD01055485;AGCD01055486;AGCD01055487;AGCD01055488;AGCD01055489;AGCD01055490;AGCD01055491;GBDF01046178;XM_005401923;XM_005401927;XM_005401929;XM_005401930;XM_013503062;XM_013503063;XM_013503064;XM_013503065;XM_013503066;XM_013503067;XM_013503068;XM_013503069 XP_005401980;XP_005401984;XP_005401986;XP_005401987;XP_013358516;XP_013358517;XP_013358518;XP_013358519;XP_013358520;XP_013358521;XP_013358522;XP_013358523 MODEL 9016443 pseudo LOC102029743 translationally-controlled tumor protein pseudogene NW_004955482 6045673 6047330 - 102029743 AGCD01057370 MODEL 8736631 protein-coding Ino80e INO80 complex subunit E INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN Ino80 complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955493 6953945 6963910 - 102026988 AGCD01061152;GBDF01002093;XM_005405204;XM_013504785;XM_013504786;XM_013504787;XM_013504788 XP_005405261;XP_013360239;XP_013360240;XP_013360241;XP_013360242 MODEL 9025335 protein-coding Slc16a4 solute carrier family 16 member 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955435 13865956 13892687 - 102017378 AGCD01033212;GBCB01050157;XM_005388918;XM_005388919;XM_005388920;XM_013516513;XM_013516515;XM_013516516;XM_013516517 XP_005388975;XP_005388976;XP_005388977;XP_013371967;XP_013371969;XP_013371970;XP_013371971 MODEL 8717162 ncrna LOC102007693 uncharacterized LOC102007693 NW_004955437 532416 541946 + 102007693 AGCD01034142;AGCD01034143;AGCD01034144;GBDJ01142993;XR_261816 MODEL 8928493 pseudo LOC102006560 histone-binding protein RBBP4 pseudogene NW_004955412 4399982 4403024 - 102006560 AGCD01012596 MODEL 9000470 protein-coding LOC102024037 olfactory receptor 140-like NW_004955511 175875 177677 + 102024037 AGCD01066321;XM_005407938 XP_005407995 MODEL 8770727 pseudo LOC102025822 translationally-controlled tumor protein-like NW_004955506 4281834 4288280 - 102025822 AGCD01065332 MODEL 8956908 protein-coding Edf1 endothelial differentiation related factor 1 ENCODES a protein that exhibits TFIID-class transcription factor complex binding (ortholog); transcription coactivator activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy 14 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955513 4942268 4945645 - 102025493 AGCD01066944;AGCD01066945;GBDF01170783;XM_005408560;XM_013506641 XP_005408617;XP_013362095 MODEL 8787664 ncrna LOC102006194 uncharacterized LOC102006194 NW_004956032 1817 5572 + 102006194 AGCD01078914;GBBH01223549;XR_265202 MODEL 8881977 protein-coding LOC102011202 circumsporozoite protein-like NW_004955478 6863782 6864540 - 102011202 AGCD01055921;AGCD01055922;XM_005402156;XM_013503235;XM_013503236;XM_013503237 XP_005402213;XP_013358689;XP_013358690;XP_013358691 MODEL 8831627 protein-coding Dcaf13 DDB1 and CUL4 associated factor 13 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN decidualization (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); oocyte growth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleolus (ortholog) NW_004955417 27545128 27567829 + 102022497 AGCD01018559;GBDF01049536;XM_005381951 XP_005382008 MODEL 8782011 protein-coding Arhgef40 Rho guanine nucleotide exchange factor 40 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anchoring junction (ortholog); cytoplasm (ortholog) NW_004955550 1837903 1854490 + 102008151 AGCD01072589;GBCB01076435;GBDK01195388;XM_005412102;XM_005412103;XM_013508576;XM_013508577 XP_005412159;XP_005412160;XP_013364030;XP_013364031 MODEL 9038808 protein-coding Ccdc59 coiled-coil domain containing 59 ASSOCIATED WITH colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955405 20732649 20738678 - 102030148 AGCD01005062;GBCE01169532;XM_005374398 XP_005374455 MODEL 8801495 protein-coding Ppfia3 PPFI scaffold protein A3 INVOLVED IN neurotransmitter secretion (ortholog); regulation of short-term neuronal synaptic plasticity (ortholog); synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); epididymosome (ortholog) NW_004955559 1587633 1610065 - 102022974 AGCD01073652;AGCD01073653;GBCQ01152568;XM_005412904;XM_013508999;XM_013509000;XM_013509001 XP_005412961;XP_013364453;XP_013364454;XP_013364455 MODEL 39132589 rrna 5S_rRNA 5S ribosomal RNA 8846200 protein-coding Thyn1 thymocyte nuclear protein 1 ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 35061874 35067631 - 102003426 AGCD01013397;GBDJ01191132;XM_005378596;XM_013511064;XM_013511065;XM_013511066;XM_013511067 XP_005378653;XP_013366518;XP_013366519;XP_013366520;XP_013366521 MODEL 8898370 protein-coding Fndc10 fibronectin type III domain containing 10 NW_004955486 9301802 9303246 + 102018501 AGCD01059176;GBBH01012092;GBDF01015261;XM_013504159 XP_013359613 MODEL 8831046 protein-coding Commd8 COMM domain containing 8 ASSOCIATED WITH Arachnodactyly (ortholog); atrial heart septal defect (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955443 1098053 1108873 + 102028908 AGCD01038128;GBDF01125836;XM_005391894 XP_005391951 MODEL 8768235 protein-coding LOC102005121 cysteine-rich secretory protein 3-like NW_004955411 8128236 8151585 + 102005121 AGCD01011719;GBBH01140337;XM_005377667 XP_005377724 MODEL 8760564 pseudo LOC102012453 heterogeneous nuclear ribonucleoprotein A3-like NW_004955425 6920489 6940923 - 102012453 AGCD01025375;AGCD01025376 MODEL 8722505 protein-coding Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ionotropic glutamate receptor binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN positive regulation of AMPA receptor activity (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); response to cocaine (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); Breast Cancer, Familial (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell body (ortholog); cell surface (ortholog) NW_004955478 6219637 6278759 + 102008410 AGCD01055890;AGCD01055891;GBDF01128850;XM_005402149 XP_005402206 MODEL 9040460 protein-coding Pyroxd1 pyridine nucleotide-disulphide oxidoreductase domain 1 ENCODES a protein that exhibits molecular sensor activity (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); NADH dehydrogenase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); tRNA exon ligation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sarcomere (ortholog) NW_004955413 17097859 17115148 + 102016905 AGCD01014129;GBDF01196381;XM_005379057 XP_005379114 MODEL 8794520 protein-coding LOC102003335 olfactory receptor 2S2-like NW_004955472 333588 338863 + 102003335 AGCD01053329;GBDK01098752;XM_005400985;XM_013522931 XP_005401042;XP_013378385 MODEL 9017356 protein-coding Trps1 transcriptional repressor GATA binding 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); chondrocyte differentiation (ortholog); hair follicle development (ortholog); ASSOCIATED WITH alopecia areata (ortholog); Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 21674545 21913137 - 102028191 AGCD01018402;AGCD01018403;AGCD01018404;AGCD01018405;AGCD01018406;GBCQ01151050;XM_005381890;XM_005381891;XM_005381893;XM_013512789;XM_013512790;XM_013512791;XM_013512792;XM_013512793 XP_005381947;XP_005381948;XP_005381950;XP_013368243;XP_013368244;XP_013368245;XP_013368246;XP_013368247 MODEL 39134461 misc_rna 7SK 7SK RNA 8809134 ncrna LOC102010382 uncharacterized LOC102010382 NW_004955424 3479982 3493499 + 102010382 AGCD01024311;GBDF01055317;XR_001234144 MODEL 8892161 protein-coding Chic2 cysteine rich hydrophobic domain 2 ENCODES a protein that exhibits protein complex scaffold activity (ortholog); protein-macromolecule adaptor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi-associated vesicle (ortholog); plasma membrane (ortholog) NW_004955447 16723598 16805878 + 102010211 AGCD01041101;AGCD01041102;AGCD01041103;AGCD01041104;AGCD01041105;AGCD01041106;AGCD01041107;GBDF01157265;XM_005392900 XP_005392957 MODEL 8788107 ncrna LOC102024038 uncharacterized LOC102024038 NW_004955429 22472048 22477861 - 102024038 AGCD01029028;GBCB01002019;XR_001234460;XR_261388 MODEL 8965331 ncrna LOC102012854 uncharacterized LOC102012854 NW_004955471 10905684 10911425 - 102012854 AGCD01053235;GBDF01112987;XR_263533 MODEL 8708307 protein-coding Barhl2 BarH like homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell fate commitment (ortholog); cell fate determination (ortholog); nervous system development (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Lymphatic Metastasis (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955423 3516973 3522459 + 102005484 AGCD01023515;GBDF01014640;GBDF01014641;XM_013514374 XP_013369828 MODEL 8711305 protein-coding Ryr1 ryanodine receptor 1 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-induced calcium release activity (ortholog); enzyme binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955468 879807 1000118 - 102016148 AGCD01051742;AGCD01051743;AGCD01051744;AGCD01051745;AGCD01051746;AGCD01051747;AGCD01051748;GBCB01005975;GBDI01002716;XM_013522408 XP_013377862 MODEL 8972223 protein-coding Raet1e retinoic acid early transcript 1E ENCODES a protein that exhibits natural killer cell lectin-like receptor binding (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); positive regulation of natural killer cell mediated cytotoxicity (ortholog); T cell mediated cytotoxicity (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); membrane (ortholog) NW_004955439 11413978 11420902 + 102007593 AGCD01035906;GBDF01014346;XM_013517302 XP_013372756 MODEL 8869786 pseudo LOC102018632 protein SET-like NW_004955432 3642624 3644695 + 102018632 AGCD01030672 MODEL 8874082 protein-coding Etv2 ETS variant transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); blood vessel morphogenesis (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Aortic Remodeling (ortholog); hypoplastic left heart syndrome (ortholog); limb ischemia (ortholog) NW_004955468 4857023 4859926 + 102026095 AGCD01051923;GBDF01048409;XM_013522386 XP_013377840 MODEL 8799737 protein-coding Shisa6 shisa family member 6 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN excitatory chemical synaptic transmission (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); postsynaptic neurotransmitter receptor diffusion trapping (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric, glutamatergic, excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955467 5701521 5998910 - 102004368 AGCD01051397;AGCD01051398;AGCD01051399;AGCD01051400;AGCD01051401;GBDF01307813;XM_005399742 XP_005399799 MODEL 8830875 protein-coding Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); positive regulation of Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955506 1110146 1113130 + 102022207 AGCD01065245;AGCD01065246;GBBH01119203;GBBH01119219;XM_005407503 XP_005407560 MODEL 8863678 pseudo LOC102029745 proteasome activator complex subunit 2 pseudogene NW_004955419 10131049 10131778 - 102029745 AGCD01019939 MODEL 39133900 misc_rna 7SK 7SK RNA 10100611 ncrna LOC106148526 uncharacterized LOC106148526 NW_004955423 26388898 26394635 + 106148526 AGCD01024095;GBCE01127705;XR_001234060;XR_001234061;XR_001234062 MODEL 39131661 rrna 5S_rRNA 5S ribosomal RNA 8881916 protein-coding Commd9 COMM domain containing 9 INVOLVED IN cholesterol homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 10149957 10186202 + 102008004 AGCD01022732;AGCD01022733;GBBH01063319;XM_005384118;XM_005384119;XM_005384120;XM_013514314 XP_005384175;XP_005384176;XP_005384177;XP_013369768 MODEL 9005236 ncrna LOC102003682 uncharacterized LOC102003682 NW_004955432 17288234 17299687 - 102003682 AGCD01031120;GBDF01039986;XR_001234642;XR_261531 MODEL 8751086 protein-coding Eif6 eukaryotic translation initiation factor 6 ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog); lamin filament (ortholog) NW_004956210 226 6819 + 102011720 AGCD01079244;GBBH01031356;XM_005415177 XP_005415234 MODEL 8731899 pseudo LOC102025825 olfactory receptor 1013-like NW_004955511 1840614 1841529 + 102025825 AGCD01066381 MODEL 8714999 protein-coding Dtna dystrobrevin alpha ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphatase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell projection (ortholog) NW_004955402 21414122 21676389 + 102026692 AGCD01000590;AGCD01000591;AGCD01000592;GBDJ01229810;XM_005372772;XM_005372773;XM_005372775;XM_005372778;XM_005372779;XM_005372780;XM_005372782;XM_005372783;XM_005372786;XM_005372788;XM_005372790;XM_013508451;XM_013508483;XM_013508554;XM_013508773;XM_013508872 XP_005372829;XP_005372830;XP_005372832;XP_005372835;XP_005372836;XP_005372837;XP_005372839;XP_005372840;XP_005372843;XP_005372845;XP_005372847;XP_013363905;XP_013363937;XP_013364008;XP_013364227;XP_013364326 MODEL 8767494 protein-coding Dema1 DPM1 ER membrane anchor 1 ASSOCIATED WITH visceral heterotaxy (ortholog) NW_004955424 22709676 22712178 - 102024590 AGCD01024981;GBDF01045251;XM_013514609;XM_013514610;XR_001234161 XP_013370063;XP_013370064 MODEL 9065833 protein-coding Edil3 EGF like and discoidin domains 3 INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955418 26391309 26680553 + 102004165 AGCD01019394;AGCD01019395;AGCD01019396;AGCD01019397;AGCD01019398;GBBH01020972;XM_013513061 XP_013368515 MODEL 9010589 protein-coding LOC102021968 serine/threonine-protein kinase B-raf-like NW_004955416 31492945 31499854 + 102021968 AGCD01017758;XM_013512431 XP_013367885 MODEL 9045391 protein-coding Cthrc1 collagen triple helix repeat containing 1 ENCODES a protein that exhibits frizzled binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN cell migration (ortholog); cochlea morphogenesis (ortholog); establishment of planar polarity involved in neural tube closure (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955417 27520420 27525907 + 102021126 AGCD01018559;GBBH01218853;GBDF01208824;XM_013512691 XP_013368145 MODEL 8895212 protein-coding Dcaf15 DDB1 and CUL4 associated factor 15 ENCODES a protein that exhibits small molecule binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); regulation of natural killer cell activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955415 32701701 32710051 + 102008091 AGCD01016730;AGCD01016731;GBCE01001095;XM_005381076 XP_005381133 MODEL 10179767 protein-coding Ccdc6 coiled-coil domain containing 6 ENCODES a protein that exhibits identical protein binding (ortholog); protein complex scaffold activity (ortholog); INVOLVED IN positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog) NW_004955425 13344926 13444802 - 106148619 AGCD01025535;GBDJ01016803;XM_013514770 XP_013370224 MODEL 39132592 rrna 5S_rRNA 5S ribosomal RNA 9065048 protein-coding Arhgef5 Rho guanine nucleotide exchange factor 5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); hematopoietic stem cell homeostasis (ortholog); myeloid dendritic cell chemotaxis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Genetic Predisposition to Disease (ortholog); Lung Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955491 539040 561494 + 102005479 AGCD01060340;GBCE01064828;XM_005404726;XM_005404727 XP_005404783;XP_005404784 MODEL 10093929 protein-coding LOC106147435 uncharacterized LOC106147435 NW_004955559 778019 780705 - 106147435 AGCD01073611;GBCQ01075670;XM_013508944 XP_013364398 MODEL 8988216 protein-coding Tia1 TIA1 cytotoxic granule associated RNA binding protein ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN cytoplasmic stress granule assembly (ortholog); negative regulation of cytokine production (ortholog); negative regulation of translation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 26 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955424 14887722 14920844 + 102006791 AGCD01024664;GBDF01163127;XM_005385618;XM_005385619;XM_005385620;XM_005385621;XM_005385622;XM_005385623;XM_013514641;XR_001234178 XP_005385675;XP_005385676;XP_005385677;XP_005385678;XP_005385679;XP_005385680;XP_013370095 MODEL 8728628 ncrna LOC102025118 uncharacterized LOC102025118 NW_004955416 9380213 9382086 - 102025118 AGCD01017086;GBDK01117927;XR_001233292;XR_001233293 MODEL 8935083 protein-coding Pter phosphotriesterase related ENCODES a protein that exhibits N-acetyltaurine hydrolase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); regulation of appetite (ortholog); taurine metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955429 11296833 11356082 - 102030449 AGCD01028686;AGCD01028687;GBDK01220368;XM_005386971;XM_013515555;XM_013515556;XM_013515557 XP_005387028;XP_013371009;XP_013371010;XP_013371011 MODEL 8893878 protein-coding Tacc3 transforming acidic coiled-coil containing protein 3 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955514 973457 986640 + 102016301 AGCD01067028;GBCQ01189113;XM_005408701 XP_005408758 MODEL 8830394 protein-coding Inpp1 inositol polyphosphate-1-phosphatase PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955403 8713565 8742725 - 102030142 AGCD01001887;AGCD01001888;AGCD01001889;GBDK01142523;XM_005373303;XM_005373304;XM_005373305;XM_005373306;XM_013512293;XM_013512299;XM_013512307 XP_005373360;XP_005373361;XP_005373362;XP_005373363;XP_013367747;XP_013367753;XP_013367761 MODEL 8834822 protein-coding Slc16a5 solute carrier family 16 member 5 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); lymphoma (ortholog) NW_004955553 1969371 1996170 + 102019441 AGCD01072910;AGCD01072911;GBBH01219043;XM_013508643;XM_013508644;XM_013508645;XM_013508646;XM_013508647 XP_013364097;XP_013364098;XP_013364099;XP_013364100;XP_013364101 MODEL 9025858 protein-coding Lrrc3b leucine rich repeat containing 3B ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog) NW_004955430 18351763 18440120 + 102015654 AGCD01029690;AGCD01029691;AGCD01029692;GBDJ01392673;XM_005387498 XP_005387555 MODEL 39131662 rrna 5S_rRNA 5S ribosomal RNA 8916035 pseudo LOC102011203 multifunctional protein ADE2 pseudogene NW_004955481 3893416 3894341 + 102011203 AGCD01056921;XR_263775 MODEL 8935649 protein-coding LOC102006195 geranylgeranyl transferase type-2 subunit alpha-like NW_004957120 9 1764 + 102006195 AGCD01080516;GBBH01089051;GBCE01054026;XM_005415225 XP_005415282 MODEL 8700760 pseudo LOC102024039 RNA exonuclease 1 homolog pseudogene NW_004955431 8914638 8931636 - 102024039 AGCD01030148;AGCD01030149;XM_005387663 MODEL 8729472 pseudo LOC102009251 heterogeneous nuclear ribonucleoprotein D-like pseudogene NW_004955455 3817536 3818804 + 102009251 AGCD01045653;XR_262827 MODEL 8820198 protein-coding Ppfia4 PPFI scaffold protein A4 ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); parallel fiber to Purkinje cell synapse (ortholog); presynapse (ortholog) NW_004955406 39047069 39094663 + 102006420 AGCD01006618;GBCE01131582;XM_013522498;XM_013522500;XM_013522503;XM_013522514;XR_001236928;XR_001236930;XR_001236934 XP_013377952;XP_013377954;XP_013377957;XP_013377968 MODEL 39132594 rrna 5S_rRNA 5S ribosomal RNA 8799462 protein-coding Wrnip1 WRN helicase interacting protein 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN DNA synthesis involved in DNA repair (ortholog); regulation of DNA-templated DNA replication initiation (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955465 10574601 10594570 - 102026302 AGCD01050510;AGCD01050511;GBBH01090406;GBCQ01093710;XM_005398930 XP_005398987 MODEL 8768395 ncrna LOC102012454 uncharacterized LOC102012454 NW_004955426 21276896 21279599 - 102012454 AGCD01026583;GBDF01235356;XR_261214 MODEL 8710393 protein-coding LOC102005126 olfactory receptor 149-like NW_004955412 25061204 25062136 + 102005126 AGCD01013133;XM_005378414 XP_005378471 MODEL 8942923 protein-coding LOC102006562 olfactory receptor 10J1-like NW_004955468 11188817 11189746 + 102006562 AGCD01052120;XM_013522346 XP_013377800 MODEL 39133901 misc_rna 7SK 7SK RNA 8793874 protein-coding Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 FOUND IN AMPA glutamate receptor complex (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955478 6110440 6152677 + 102008097 AGCD01055888;AGCD01055889;GBDK01217001;XM_005402148 XP_005402205 MODEL 8810988 pseudo LOC102029746 UBX domain-containing protein 2A pseudogene NW_004955483 226235 227340 + 102029746 AGCD01057602 MODEL 8728363 protein-coding Pyroxd2 pyridine nucleotide-disulphide oxidoreductase domain 2 INVOLVED IN mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Leigh disease (ortholog); lung cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955507 4384626 4407603 - 102012985 AGCD01065648;GBDK01322816;XM_005407661;XM_005407662;XM_005407663 XP_005407718;XP_005407719;XP_005407720 MODEL 8979720 protein-coding LOC102003337 olfactory receptor 51G2-like NW_004955414 20918933 20919880 - 102003337 AGCD01015395;XM_005380486 XP_005380543 MODEL 39134462 misc_rna 7SK 7SK RNA 8982585 protein-coding Trpt1 tRNA phosphotransferase 1 ENCODES a protein that exhibits tRNA 2'-phosphotransferase activity (ortholog); INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955422 20851806 20854349 + 102020577 AGCD01023095;GBDF01118758;XM_005384638;XM_005384641;XM_013513959 XP_005384695;XP_005384698;XP_013369413 MODEL 8791821 pseudo LOC102010387 selenide, water dikinase 2-like NW_004955502 7355026 7356276 - 102010387 AGCD01064441 MODEL 8834281 protein-coding LOC102003683 taste receptor type 2 member 7-like NW_004955432 18798901 18799800 + 102003683 AGCD01031161;XM_005388153 XP_005388210 MODEL 9018510 protein-coding Chid1 chitinase domain containing 1 ENCODES a protein that exhibits oligosaccharide binding (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955476 11246745 11276341 + 102006452 AGCD01055445;AGCD01055446;GBCE01033146;XM_005401799;XM_013502940;XM_013502941;XM_013502942;XM_013502943;XM_013502944;XM_013502945;XM_013502947 XP_005401856;XP_013358394;XP_013358395;XP_013358396;XP_013358397;XP_013358398;XP_013358399;XP_013358401 MODEL 8788461 protein-coding LOC102012855 vomeronasal type-1 receptor 90-like NW_004955414 15022049 15022963 - 102012855 AGCD01015170;XM_005380442 XP_005380499 MODEL 8762499 pseudo LOC102025826 GTP-binding protein SAR1b pseudogene NW_004955512 1337153 1337741 - 102025826 AGCD01066638 MODEL 8819364 protein-coding Lrrc3c leucine rich repeat containing 3C ASSOCIATED WITH allergic asthma (ortholog) NW_004955451 14644464 14647078 + 102005877 AGCD01043564;GBDK01099220;XM_005394332;XM_005394333;XM_005394334;XM_005394335 XP_005394389;XP_005394390;XP_005394391;XP_005394392 MODEL 8787900 protein-coding Poc1b POC1 centriolar protein B INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH cone-rod dystrophy 20 (ortholog); oligoasthenoteratozoospermia (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955405 26720279 26786385 - 102014527 AGCD01005204;GBDF01005071;XM_005374437;XM_013518180 XP_005374494;XP_013373634 MODEL 8893754 protein-coding Barx1 BARX homeobox 1 INVOLVED IN animal organ development (ortholog); anterior/posterior pattern specification (ortholog); cell-cell signaling (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); esophagus adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955515 4230713 4234189 + 102009310 AGCD01067318;GBBH01116403;GBCE01029812;XM_005408924 XP_005408981 MODEL 9048564 protein-coding Fndc11 fibronectin type III domain containing 11 ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); melanoma (ortholog) NW_004955528 670563 672995 - 102009102 AGCD01069541;GBDI01323623;XM_005409959 XP_005410016 MODEL 8910313 ncrna LOC102007697 uncharacterized LOC102007697 NW_004955438 985521 989683 - 102007697 AGCD01034966;GBDF01049911;XR_001235136 MODEL 8927481 protein-coding Ryr2 ryanodine receptor 2 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-induced calcium release activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN A band (ortholog); calcium channel complex (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955492 2647597 3275512 - 102016064 AGCD01060680;AGCD01060681;AGCD01060682;AGCD01060683;AGCD01060684;AGCD01060685;AGCD01060686;AGCD01060687;AGCD01060688;AGCD01060689;AGCD01060690;AGCD01060691;AGCD01060692;AGCD01060693;GBCE01082492;GBDJ01219452;XM_013504700;XM_013504701;XM_013504702;XM_013504703;XM_013504704;XM_013504705;XM_013504706 XP_013360154;XP_013360155;XP_013360156;XP_013360157;XP_013360158;XP_013360159;XP_013360160 MODEL 8747232 protein-coding Dcaf16 DDB1 and CUL4 associated factor 16 ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleus (ortholog) NW_004955480 6437329 6438797 + 102023910 AGCD01056684;GBDK01429530;XM_005402545 XP_005402602 MODEL 39131529 protein-coding CCDC6 coiled-coil domain containing 6 8850973 protein-coding Raf1 Raf-1 proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); ATP binding (ortholog); INVOLVED IN cell differentiation (ortholog); death-inducing signaling complex assembly (ortholog); ERBB signaling pathway (ortholog); PARTICIPATES IN altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; ceramide signaling pathway; endothelin signaling pathway; ASSOCIATED WITH Abdominal Pain (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955429 17980956 18049723 + 102019518 AGCD01028872;AGCD01028873;AGCD01028874;GBDF01086292;XM_005387107;XM_005387108;XM_005387109;XM_013515404;XM_013515405 XP_005387164;XP_005387165;XP_005387166;XP_013370858;XP_013370859 MODEL 8741657 protein-coding Etv3l ETS variant transcription factor 3 like ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog) NW_004955545 3121363 3132748 - 102017507 AGCD01071933;GBDI01354928;XM_005411734;XM_013508351;XM_013508352;XM_013508353;XM_013508354;XM_013508355;XM_013508356;XM_013508357;XR_001232196 XP_005411791;XP_013363805;XP_013363806;XP_013363807;XP_013363808;XP_013363809;XP_013363810;XP_013363811 MODEL 8773163 protein-coding Rfpl4b ret finger protein like 4B NW_004955526 4242108 4253095 - 102013207 AGCD01069364;XM_013507355 XP_013362809 MODEL 8929342 protein-coding Arhgef6 Rac/Cdc42 guanine nucleotide exchange factor 6 INVOLVED IN lamellipodium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); lamellipodium (ortholog) NW_004955489 8360027 8459309 + 102011450 AGCD01060018;GBCE01024500;XM_005404583;XM_005404584;XM_013504490;XM_013504491;XM_013504492 XP_005404640;XP_005404641;XP_013359944;XP_013359945;XP_013359946 MODEL 10160294 ncrna LOC106148527 uncharacterized LOC106148527 NW_004955423 53987 58961 - 106148527 AGCD01023410;XR_001234063 MODEL 39133902 misc_rna 7SK 7SK RNA 8774319 protein-coding Comt catechol-O-methyltransferase ENCODES a protein that exhibits catechol O-methyltransferase activity (ortholog); INVOLVED IN positive regulation of lactation; artery development (ortholog); behavioral fear response (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Acute Pain (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cell body; extracellular region; glial cell projection NW_004955442 18130282 18152153 - 102028906 AGCD01037997;AGCD01037998;GBDF01121489;XM_005391754;XM_013517802 XP_005391811;XP_013373256 MODEL 626189180 snorna SNORA46 Small nucleolar RNA SNORA46 8987850 ncrna LOC102024042 uncharacterized LOC102024042 NW_004955522 936102 943819 - 102024042 AGCD01068353;AGCD01068354;GBDF01208604;XR_001231896 MODEL 8921477 ncrna LOC102021975 uncharacterized LOC102021975 NW_004955419 27635866 27705302 + 102021975 AGCD01020444;AGCD01020445;AGCD01020446;AGCD01020447;GBDI01327220;XR_001233611;XR_001233612;XR_001233613;XR_001233614;XR_001233615;XR_001233616;XR_001233617;XR_001233618;XR_260666 MODEL 8902306 protein-coding Ctif cap binding complex dependent translation initiation factor INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of translational initiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955402 33706824 33986476 + 102009780 AGCD01000842;AGCD01000843;AGCD01000844;GBDI01105779;XM_005372899;XM_005372901;XM_005372902;XM_013510556 XP_005372956;XP_005372958;XP_005372959;XP_013366010 MODEL 8861004 ncrna LOC102018635 uncharacterized LOC102018635 NW_004955433 21104127 21129938 + 102018635 AGCD01031916;GBDJ01222197;XR_261603 MODEL 8819380 protein-coding Dtnb dystrobrevin beta ENCODES a protein that exhibits DNA binding (ortholog); molecular adaptor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN neuron differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN basal plasma membrane (ortholog); cytoplasm (ortholog); GABA-ergic synapse (ortholog) NW_004955469 7402777 7771767 - 102007104 AGCD01052415;AGCD01052416;AGCD01052417;AGCD01052418;AGCD01052419;AGCD01052420;AGCD01052421;AGCD01052422;AGCD01052423;AGCD01052424;AGCD01052425;AGCD01052426;AGCD01052427;AGCD01052428;AGCD01052429;AGCD01052430;AGCD01052431;AGCD01052432;GBDK01182459;XM_013522576;XM_013522577;XM_013522578;XM_013522579;XM_013522580;XM_013522581;XM_013522582;XM_013522583;XM_013522584;XM_013522585;XM_013522586;XM_013522587;XM_013522588;XM_013522589;XM_013522590;XM_013522591;XM_013522592;XM_013522593;XM_013522594;XM_013522595 XP_013378030;XP_013378031;XP_013378032;XP_013378033;XP_013378034;XP_013378035;XP_013378036;XP_013378037;XP_013378038;XP_013378039;XP_013378040;XP_013378041;XP_013378042;XP_013378043;XP_013378044;XP_013378045;XP_013378046;XP_013378047;XP_013378048;XP_013378049 MODEL 8991045 protein-coding Barx2 BARX homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage condensation (ortholog); myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog); transcription regulator complex (ortholog) NW_004955412 30345837 30418186 + 102017210 AGCD01013298;GBCB01038794;XM_005378547 XP_005378604 MODEL 8706553 protein-coding Tial1 TIA1 cytotoxic granule associated RNA binding protein like 1 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); protein-RNA adaptor activity (ortholog); INVOLVED IN germ cell development (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955551 370792 395836 - 102010637 AGCD01072655;GBCQ01042559;XM_005412159;XM_005412160;XM_013508586;XM_013508587 XP_005412216;XP_005412217;XP_013364040;XP_013364041 MODEL 39133319 snrna U4 U4 spliceosomal RNA 8852726 protein-coding Ptf1a pancreas associated transcription factor 1a ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cell differentiation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH cerebellar disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955429 5807804 5809522 - 102011348 AGCD01028536;AGCD01028537;GBDF01208599;XM_005387232 XP_005387289 MODEL 8773900 pseudo LOC102006568 prefoldin subunit 1 pseudogene NW_004955472 1989943 1990819 - 102006568 AGCD01053427 MODEL 9058248 protein-coding Slc16a6 solute carrier family 16 member 6 ASSOCIATED WITH endometriosis (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955478 4449362 4467866 + 102027069 AGCD01055851;GBBH01055718;XM_005402118;XM_005402119 XP_005402175;XP_005402176 MODEL 8910633 protein-coding Eipr1 EARP complex and GARP complex interacting protein 1 INVOLVED IN endocytic recycling (ortholog); positive regulation of endocytic recycling (ortholog); positive regulation of retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN EARP complex (ortholog); GARP complex (ortholog); nucleolus (ortholog) NW_004955487 3865469 3959750 + 102018608 AGCD01059295;AGCD01059296;AGCD01059297;GBDF01086957;XM_005404376 XP_005404433 MODEL 9063518 protein-coding Rft1 RFT1 glycolipid translocator homolog ENCODES a protein that exhibits glycolipid floppase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); glycolipid translocation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); bruxism (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955430 3055766 3096501 - 102029213 AGCD01029191;GBDI01215765;XM_005387364 XP_005387421 MODEL 39131663 rrna 5S_rRNA 5S ribosomal RNA 9005647 protein-coding Edn1 endothelin 1 ENCODES a protein that exhibits cytokine activity (ortholog); endothelin A receptor binding (ortholog); endothelin B receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); artery smooth muscle contraction (ortholog); axon extension (ortholog); PARTICIPATES IN endothelin signaling pathway; hypoxia inducible factor pathway; inflammatory response pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN basal part of cell (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955465 2287906 2314945 - 102016360 AGCD01050349;AGCD01050350;GBCQ01058513;XM_005398820 XP_005398877 MODEL 8974604 protein-coding Dennd10 DENN domain containing 10 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosome transport via multivesicular body sorting pathway (ortholog); protein transport (ortholog); regulation of early endosome to late endosome transport (ortholog); FOUND IN late endosome (ortholog) NW_004955431 23601338 23623852 + 102006380 AGCD01030543;AGCD01030544;AGCD01030545;GBDF01154405;XM_005387885;XM_013515881 XP_005387942;XP_013371335 MODEL 8897189 pseudo LOC102010388 uncharacterized LOC102010388 NW_004955503 3309922 3337412 - 102010388 AGCD01064622 MODEL 8997263 ncrna LOC102009252 uncharacterized LOC102009252 NW_004955407 17252038 17275416 - 102009252 AGCD01007243;AGCD01007244;AGCD01007245;AGCD01007246;GBDF01238047;XR_001231027;XR_259564;XR_259565 MODEL 9019134 protein-coding LOC102025827 mediator of RNA polymerase II transcription subunit 27 NW_004955513 1462308 1582894 - 102025827 AGCD01066857;AGCD01066858;GBDJ01423463;XM_013506710 XP_013362164 MODEL 8723035 ncrna LOC102025119 uncharacterized LOC102025119 NW_004955416 31751765 31788345 + 102025119 AGCD01017770;AGCD01017771;AGCD01017772;AGCD01017773;GBDF01288200;XR_001233286;XR_260453;XR_260454;XR_260455;XR_260456 MODEL 8760503 protein-coding LOC102009253 keratin-associated protein 20-2-like NW_004955407 30214295 30214462 + 102009253 AGCD01007628;XM_005375647 XP_005375704 MODEL 9040895 protein-coding LOC102005462 chromosome unknown open reading frame, human C19orf53 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955415 32590287 32592465 + 102005462 AGCD01016726;GBDI01013906;XM_005381066 XP_005381123 MODEL 8856160 pseudo LOC102012457 charged multivesicular body protein 5-like NW_004955509 3240394 3241053 + 102012457 AGCD01066019 MODEL 8795868 protein-coding Ctla4 cytotoxic T-lymphocyte associated protein 4 ENCODES a protein that exhibits receptor decoy activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); DNA damage response (ortholog); negative regulation of B cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); alcohol-associated liver disease (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955457 11028707 11034898 - 102021631 AGCD01046961;GBDI01208688;XM_005397012;XM_005397013;XM_005397014 XP_005397069;XP_005397070;XP_005397071 MODEL 8971880 protein-coding Tacr1 tachykinin receptor 1 ENCODES a protein that exhibits substance P receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); aggressive behavior (ortholog); angiotensin-mediated drinking behavior (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute necrotizing pancreatitis (ortholog); alcohol use disorder (ortholog); FOUND IN cell body (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955424 10614340 10761872 + 102018411 AGCD01024522;AGCD01024523;AGCD01024524;AGCD01024525;AGCD01024526;GBBH01188694;XM_005385472 XP_005385529 MODEL 8787656 pseudo LOC102005128 adenylate kinase 4, mitochondrial pseudogene NW_004955412 30505705 30506289 - 102005128 AGCD01013301 MODEL 9055287 protein-coding Dcaf17 DDB1 and CUL4 associated factor 17 INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); diabetes mellitus (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) NW_004955449 3428311 3458723 - 102020503 AGCD01041851;GBCE01092377;XM_005393236;XM_005393237;XM_005393239;XM_013518768;XM_013518769 XP_005393293;XP_005393294;XP_005393296;XP_013374222;XP_013374223 MODEL 9043590 pseudo LOC102029747 40S ribosomal protein SA-like NW_004955419 15378624 15379899 + 102029747 AGCD01020076 MODEL 9013463 protein-coding Cacng6 calcium voltage-gated channel auxiliary subunit gamma 6 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog) NW_004955604 189261 205058 - 102016771 AGCD01076867;AGCD01076868;GBCB01007536;XM_005414869 XP_005414926 MODEL 8957836 ncrna LOC102006201 uncharacterized LOC102006201 NW_004955452 2332910 2343134 + 102006201 AGCD01043890;GBDF01181028;XR_262638;XR_262639 MODEL 8917734 protein-coding Trpv1 transient receptor potential cation channel subfamily V member 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel activity (ortholog); calmodulin binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); external side of plasma membrane (ortholog) NW_004955467 13221391 13239089 + 102022802 AGCD01051668;AGCD01051669;XM_005399725 XP_005399782 MODEL 39133903 misc_rna 7SK 7SK RNA 8913815 ncrna LOC102003684 uncharacterized LOC102003684 NW_004955520 82188 91113 - 102003684 AGCD01068004;GBDI01367358;XR_264580 MODEL 8915488 ncrna LOC102012860 uncharacterized LOC102012860 NW_004955418 16415786 16489113 - 102012860 AGCD01019124;GBDF01307770;XR_001233536;XR_260562;XR_260563 MODEL 10254376 protein-coding Shisa7 shisa family member 7 ENCODES a protein that exhibits GABA receptor binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid receptor clustering (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); memory (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric, glutamatergic, excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955567 840193 845093 + 106147486 AGCD01074438;AGCD01074439;GBDJ01371014;GBDJ01371016;XM_013509311 XP_013364765 MODEL 10070852 ncrna LOC106147436 uncharacterized LOC106147436 NW_004955559 2173390 2184797 + 106147436 AGCD01073697;AGCD01073698;GBBH01132400;XR_001232340 MODEL 150537112 snorna SNORD37 Small nucleolar RNA SNORD37 8884224 protein-coding Poc5 POC5 centriolar protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN centriole elongation (ortholog); negative regulation of centriole elongation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955425 25055259 25092101 + 102022720 AGCD01025908;AGCD01025909;GBCB01111720;GBDF01187988;XM_013514890;XM_013514891;XM_013514892 XP_013370344;XP_013370345;XP_013370346 MODEL 39132600 rrna 5S_rRNA 5S ribosomal RNA 8965498 protein-coding Fndc3a fibronectin type III domain containing 3A INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955431 2553311 2696596 + 102019193 AGCD01029934;AGCD01029935;AGCD01029936;AGCD01029937;GBDF01080939;XM_005387570;XM_005387571;XM_005387573;XM_005387574 XP_005387627;XP_005387628;XP_005387630;XP_005387631 MODEL 8855631 protein-coding Ccdc60 coiled-coil domain containing 60 NW_004955455 11998223 12163986 - 102017097 AGCD01046027;AGCD01046028;AGCD01046029;AGCD01046030;AGCD01046031;AGCD01046032;GBDF01154387;XM_005396527 XP_005396584 MODEL 8970554 protein-coding Dtnbp1 dystrobrevin binding protein 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); BLOC-1 complex (ortholog); cell body (ortholog) NW_004955590 276143 382812 + 102025745 AGCD01076199;AGCD01076200;AGCD01076201;AGCD01076202;GBCQ01103688;XM_013509961;XM_013509962 XP_013365415;XP_013365416 MODEL 9041222 protein-coding Wsb1 WD repeat and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein aggregate center assembly (ortholog); protein K27-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); Lewy body (ortholog) NW_004955481 6014218 6034850 - 102015405 AGCD01057006;GBDJ01022597;XM_005402791;XM_013503496;XM_013503497 XP_005402848;XP_013358950;XP_013358951 MODEL 8894931 protein-coding Ppfibp1 PPFIB scaffold protein 1 INVOLVED IN cortical microtubule organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog) NW_004955505 7191751 7394506 - 102021579 AGCD01065201;AGCD01065202;AGCD01065203;AGCD01065204;GBCQ01071728;XM_005407163;XM_005407168;XM_005407169;XM_013505927;XM_013505928;XM_013505929;XM_013505930;XM_013505931;XM_013505932;XM_013505933 XP_005407220;XP_005407225;XP_005407226;XP_013361381;XP_013361382;XP_013361383;XP_013361384;XP_013361385;XP_013361386;XP_013361387 MODEL 8765453 pseudo LOC102003338 zinc finger protein 3-like NW_004955415 14712827 14722881 - 102003338 AGCD01016308 MODEL 8842262 protein-coding Pyurf PIGY upstream open reading frame INVOLVED IN protein stabilization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) NW_004955474 11944579 11945906 + 102008310 AGCD01054643;GBCE01000203;XM_013523090 XP_013378544 MODEL 39134463 misc_rna 7SK 7SK RNA 9052015 ncrna LOC102011204 uncharacterized LOC102011204 NW_004955418 503166 505034 - 102011204 AGCD01018678;GBDF01041809;XR_260531 MODEL 9018823 protein-coding Arhgef7 Rho guanine nucleotide exchange factor 7 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); gamma-tubulin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN astrocyte cell migration (ortholog); Golgi organization (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955404 1749051 1835455 - 102014970 AGCD01003228;AGCD01003229;AGCD01003230;AGCD01003231;GBCE01029760;GBCQ01039724;XM_013515723 XP_013371177 MODEL 10234123 ncrna LOC106148528 uncharacterized LOC106148528 NW_004955423 21782517 21787470 + 106148528 AGCD01023948;GBDF01268069;XR_001234064 MODEL 8831395 protein-coding Tiam1 TIAM Rac1 associated GEF 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); cardiac muscle hypertrophy (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axonal growth cone (ortholog); cell junction (ortholog); cell-cell contact zone (ortholog) NW_004955407 30804769 31178420 - 102012732 AGCD01007639;AGCD01007640;AGCD01007641;AGCD01007642;GBDF01087706;XM_005375657;XM_005375658;XM_005375660;XM_013504080;XM_013504086;XM_013504090 XP_005375714;XP_005375715;XP_005375717;XP_013359534;XP_013359540;XP_013359544 MODEL 8720378 protein-coding LOC102006569 olfactory receptor 51L1-like NW_004955414 21331309 21332259 - 102006569 AGCD01015415;XM_005380496 XP_005380553 MODEL 8972683 protein-coding Elac1 elaC ribonuclease Z 1 ENCODES a protein that exhibits 3'-tRNA processing endoribonuclease activity (ortholog); tRNA-specific ribonuclease activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); tRNA 3'-end processing (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH colorectal cancer (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955402 35904552 35918120 + 102021502 AGCD01000908;GBDK01193175;XM_005372936;XM_005372938;XM_005372939 XP_005372993;XP_005372995;XP_005372996 MODEL 8889012 protein-coding Slc16a7 solute carrier family 16 member 7 ENCODES a protein that exhibits identical protein binding (ortholog); lactate transmembrane transporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955458 7232886 7352782 + 102014648 AGCD01047582;AGCD01047583;GBDF01156412;XM_005397423;XM_005397424;XM_005397425;XM_005397427 XP_005397480;XP_005397481;XP_005397482;XP_005397484 MODEL 8982678 protein-coding Comtd1 catechol-O-methyltransferase domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955437 16853516 16854867 + 102023847 AGCD01034715;GBCQ01065913;GBDF01055494;XM_013516968 XP_013372422 MODEL 9008229 protein-coding Lrrc4 leucine rich repeat containing 4 INVOLVED IN excitatory synapse assembly (ortholog); modulation of chemical synaptic transmission (ortholog); postsynaptic density protein 95 clustering (ortholog); FOUND IN dendritic spine (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955479 9012253 9066940 - 102023804 AGCD01056456;GBDF01210045;XM_005402363;XM_005402364;XM_005402365;XM_013503285;XR_001230881;XR_263738 XP_005402420;XP_005402421;XP_005402422;XP_013358739 MODEL 8727902 ncrna LOC102024044 uncharacterized LOC102024044 NW_004955435 14761331 14782655 + 102024044 AGCD01033249;AGCD01033250;GBDF01046413;XR_001234869;XR_001234870;XR_261690;XR_261691;XR_261692;XR_261693;XR_261694 MODEL 9063563 protein-coding Rag1 recombination activating 1 ENCODES a protein that exhibits endonuclease activity (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); B cell differentiation (ortholog); negative regulation of T cell apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenosine deaminase deficiency (ortholog); Albuminuria (ortholog); FOUND IN nucleus (ortholog) NW_004955422 9891878 9928569 - 102004611 AGCD01022724;AGCD01022725;AGCD01022726;GBDF01299674;JN414958;KF590658;XM_005384104;XM_013514280 AEP18785;AGW05221;XP_005384161;XP_013369734 MODEL 8779106 pseudo LOC102007698 V-type proton ATPase subunit F pseudogene NW_004955438 4435333 4445285 + 102007698 AGCD01035043;AGCD01035044 MODEL 8818979 protein-coding LOC102021976 pyrethroid hydrolase Ces2e-like NW_004955484 9720410 9750518 - 102021976 AGCD01058425;AGCD01058426;AGCD01058427;XM_005403717 XP_005403774 MODEL 8714229 pseudo LOC102018637 dnaJ homolog subfamily B member 11-like NW_004955524 100914 102457 - 102018637 AGCD01068664 MODEL 9037414 protein-coding Etv4 ETS variant transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); motor neuron axon guidance (ortholog); negative regulation of mammary gland epithelial cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955451 16965404 16976503 - 102004880 AGCD01043714;AGCD01043715;GBBH01050865;GBBH01050866;XM_013519235;XM_013519236 XP_013374689;XP_013374690 MODEL 8709578 protein-coding LOC102025832 vomeronasal type-2 receptor 116-like NW_004955432 4760218 4786103 + 102025832 AGCD01030744;XM_013515917 XP_013371371 MODEL 9062800 protein-coding Inpp4a inositol polyphosphate-4-phosphatase type I A ENCODES a protein that exhibits inositol-1,3,4-trisphosphate 4-phosphatase activity (ortholog); inositol-3,4-bisphosphate 4-phosphatase activity (ortholog); phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity (ortholog); INVOLVED IN regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autosomal dominant dyskeratosis congenita 1 (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); glutamatergic synapse (ortholog) NW_004955470 4930568 5040153 + 102003011 AGCD01052741;AGCD01052742;GBDF01050934;XM_005400714;XM_005400715;XM_005400718;XM_005400720;XM_005400722;XM_013522723;XM_013522724;XM_013522726;XM_013522727;XM_013522728;XM_013522729;XM_013522730;XM_013522732 XP_005400771;XP_005400772;XP_005400775;XP_005400777;XP_005400779;XP_013378177;XP_013378178;XP_013378180;XP_013378181;XP_013378182;XP_013378183;XP_013378184;XP_013378186 MODEL 39133320 snrna U4 U4 spliceosomal RNA 8751626 pseudo LOC102005464 KATNB1-like protein 1 NW_004955415 14290724 14297874 + 102005464 AGCD01016295 MODEL 8823142 protein-coding Dcaf4 DDB1 and CUL4 associated factor 4 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955523 2395834 2421337 - 102004510 AGCD01068578;AGCD01068579;AGCD01068580;GBCE01116984;XM_005409439 XP_005409496 MODEL 9042382 protein-coding Chit1 chitinase 1 ENCODES a protein that exhibits chitinase activity (ortholog); endochitinase activity (ortholog); INVOLVED IN chitin catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH allergic asthma (ortholog); allergic disease (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 39229161 39253328 - 102007296 AGCD01006623;AGCD01006624;GBBH01193383;XM_005375249;XM_013522548;XM_013522551;XM_013522552 XP_005375306;XP_013378002;XP_013378005;XP_013378006 MODEL 8973305 protein-coding Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of dendrite extension (ortholog); regulation of mRNA stability (ortholog); ASSOCIATED WITH cervical cancer (ortholog); intellectual disability (ortholog); melanoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cerebellar mossy fiber (ortholog); early endosome (ortholog) NW_004955604 242627 260594 - 102017829 AGCD01076874;GBDF01263543;XM_005414870 XP_005414927 MODEL 8725117 protein-coding Rftn1 raftlin, lipid raft linker 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); dsRNA transport (ortholog); membrane raft assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); glaucoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); membrane raft (ortholog) NW_004955430 8605057 8801187 - 102028668 AGCD01029390;AGCD01029391;AGCD01029392;AGCD01029393;GBDF01187691;GBDJ01316097;XM_013515694 XP_013371148 MODEL 8955131 protein-coding Edn2 endothelin 2 ENCODES a protein that exhibits endothelin B receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN angiogenesis (ortholog); artery smooth muscle contraction (ortholog); axon extension (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Aortic Rupture (ortholog); Bradycardia (ortholog); Dissecting Aneurysm (ortholog); FOUND IN extracellular region (ortholog) NW_004955537 1228062 1233784 - 102006954 AGCD01070890;GBBH01169615;XM_005410587 XP_005410644 MODEL 9003733 pseudo LOC102003685 39S ribosomal protein L22, mitochondrial pseudogene NW_004955520 2732442 2737379 + 102003685 AGCD01068082 MODEL 8795519 protein-coding LOC102010393 uncharacterized LOC102010393 NW_004955428 1963436 1974145 + 102010393 AGCD01027626;GBBH01018275;XM_005386840 XP_005386897 MODEL 8980722 protein-coding Dennd11 DENN domain containing 11 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955494 1868793 1921919 + 102007028 AGCD01061424;AGCD01061425;AGCD01061426;AGCD01061427;AGCD01061428;AGCD01061429;GBBH01156369;XM_013504920 XP_013360374 MODEL 9053769 ncrna LOC102025121 uncharacterized LOC102025121 NW_004955418 20489068 20501173 + 102025121 AGCD01019228;GBDF01017286;XR_260574 MODEL 10286422 ncrna LOC106147438 uncharacterized LOC106147438 NW_004955559 1612329 1613069 + 106147438 AGCD01073653;GBDI01209450;XR_001232341 MODEL 39132602 rrna 5S_rRNA 5S ribosomal RNA 8787848 ncrna LOC102012458 uncharacterized LOC102012458 NW_004955429 17740928 17746251 - 102012458 AGCD01028865;GBDF01045489;XR_001234510 MODEL 9011784 protein-coding Podn podocan ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955464 6070842 6084463 - 102013705 AGCD01050017;GBBH01062255;GBDK01075021;XM_013521746 XP_013377200 MODEL 9012377 ncrna LOC102005131 uncharacterized LOC102005131 NW_004955413 25513569 25515865 - 102005131 AGCD01014408;AGCD01014409;GBDK01271867;XR_001233049;XR_260114 MODEL 8977220 protein-coding Ccdc61 coiled-coil domain containing 61 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN centriole assembly (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); centriolar subdistal appendage (ortholog); centrosome (ortholog) NW_004955574 387070 423526 + 102024395 AGCD01075104;AGCD01075105;GBCQ01180477;GBDI01326858;XM_013509570 XP_013365024 MODEL 8929816 ncrna LOC102029750 uncharacterized LOC102029750 NW_004955486 4803111 4819248 - 102029750 AGCD01059069;GBCE01167568;XR_263952 MODEL 8959534 protein-coding Tacr2 tachykinin receptor 2 ENCODES a protein that exhibits substance K receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); intestine smooth muscle contraction (ortholog); negative regulation of luteinizing hormone secretion (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); asthma (ortholog); bronchial disease (ortholog); FOUND IN plasma membrane (ortholog); sperm flagellum (ortholog); sperm head (ortholog) NW_004955437 21719246 21731963 + 102023195 AGCD01034919;AGCD01034920;GBDK01300429;XM_005390085;XM_005390086 XP_005390142;XP_005390143 MODEL 39131664 rrna 5S_rRNA 5S ribosomal RNA 39133843 snorna SNORA47 Small nucleolar RNA SNORA47 8702252 ncrna LOC102006202 uncharacterized LOC102006202 NW_004955452 4902765 4908470 + 102006202 AGCD01044001;GBCC01009101;XR_262655 MODEL 8915463 pseudo LOC102011206 isochorismatase domain-containing protein 1 pseudogene NW_004955485 129742 131023 + 102011206 AGCD01058442;XM_005403914 MODEL 8968225 protein-coding LOC102012862 2'-5'-oligoadenylate synthase 1-like NW_004955482 9327058 9336478 + 102012862 AGCD01057565;AGCD01081652;GBDI01244959;XM_005403208 XP_005403265 MODEL 8951421 protein-coding Ptgdr prostaglandin D2 receptor ENCODES a protein that exhibits prostaglandin D receptor activity (ortholog); prostaglandin J receptor activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); cellular response to prostaglandin D stimulus (ortholog); inflammatory response (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin D2 signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955409 10801370 10810161 - 102011282 AGCD01009485;GBDK01397856;XM_005376785 XP_005376842 MODEL 8893335 protein-coding LOC102024046 trace amine-associated receptor 3-like NW_004955436 13181451 13182480 - 102024046 AGCD01033855;XM_013516587 XP_013372041 MODEL 8822883 protein-coding Elac2 elaC ribonuclease Z 2 ENCODES a protein that exhibits tRNA-specific ribonuclease activity (ortholog); INVOLVED IN mitochondrial tRNA 3'-end processing (ortholog); tRNA 3'-end processing (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoribonuclease complex (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955467 4406947 4428769 + 102023131 AGCD01051367;AGCD01051368;GBCQ01066161;XM_005399338;XM_005399342;XM_013522152 XP_005399395;XP_005399399;XP_013377606 MODEL 8931610 protein-coding Edn3 endothelin 3 ENCODES a protein that exhibits endothelin B receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); axon extension (ortholog); axon guidance (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Ataxia (ortholog); Bradycardia (ortholog); congenital central hypoventilation syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955445 215910 238153 - 102016530 AGCD01039306;GBDK01184690;XM_005392203;XM_005392204 XP_005392260;XP_005392261 MODEL 8797150 protein-coding Ctnna1 catenin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN apical junction assembly (ortholog); axon regeneration (ortholog); cellular response to indole-3-methanol (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); anchoring junction (ortholog) NW_004955418 1592555 1754423 - 102024007 AGCD01018724;AGCD01018725;AGCD01018726;AGCD01018727;GBCB01002985;XM_005382092;XM_013513007 XP_005382149;XP_013368461 MODEL 9013291 protein-coding Dtwd1 DTW motif tRNA-uridine aminocarboxypropyltransferase 1 ENCODES a protein that exhibits tRNA-uridine aminocarboxypropyltransferase activity (ortholog); INVOLVED IN tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955409 4550906 4568484 - 102009021 AGCD01009292;GBCQ01127324;XM_005376691;XM_005376693;XM_013510297 XP_005376748;XP_005376750;XP_013365751 MODEL 8765517 protein-coding Etv5 ETS variant transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); locomotory behavior (ortholog); male germ-line stem cell asymmetric division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955420 21503820 21576539 + 102008001 AGCD01021138;AGCD01021139;AGCD01021140;AGCD01021141;GBDF01249226;XM_013513339 XP_013368793 MODEL 8974923 protein-coding Wsb2 WD repeat and SOCS box containing 2 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); Luo-Agrawal neurodevelopmental syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955455 13313072 13324496 + 102020418 AGCD01046069;GBBH01140149;GBDI01126390;XM_005396538 XP_005396595 MODEL 39133904 misc_rna 7SK 7SK RNA 8995179 protein-coding Ryr3 ryanodine receptor 3 ENCODES a protein that exhibits calcium-induced calcium release activity (ortholog); intracellularly gated calcium channel activity (ortholog); ryanodine-sensitive calcium-release channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); brain disease (ortholog); cerebral palsy (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); junctional membrane complex (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955416 712506 1260111 - 102024222 AGCD01016819;AGCD01016820;AGCD01016821;AGCD01016822;AGCD01016823;AGCD01016824;AGCD01016825;AGCD01016826;AGCD01016827;AGCD01016828;AGCD01016829;AGCD01016830;AGCD01016831;GBDJ01280043;XM_005381167 XP_005381224 MODEL 10180629 ncrna LOC106148529 uncharacterized LOC106148529 NW_004955423 4865658 4901101 + 106148529 AGCD01023548;AGCD01023549;GBDJ01022965;XR_001234065;XR_001234066;XR_001234067 MODEL 39131665 rrna 5S_rRNA 5S ribosomal RNA 8718252 protein-coding Arhgef9 Cdc42 guanine nucleotide exchange factor 9 INVOLVED IN receptor clustering (ortholog); regulation of postsynaptic specialization assembly (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cell cortex (ortholog); cytosol (ortholog); GABA-ergic synapse (ortholog) NW_004955475 4020922 4214464 - 102030524 AGCD01054863;AGCD01054864;AGCD01054865;AGCD01054866;AGCD01054867;GBBH01172150;XM_005401551;XM_005401552;XM_005401553;XM_013502875;XM_013502876;XM_013502877;XM_013502878;XM_013502879 XP_005401608;XP_005401609;XP_005401610;XP_013358329;XP_013358330;XP_013358331;XP_013358332;XP_013358333 MODEL 9023981 protein-coding LOC102006574 profilin-1-like NW_004955475 4545432 4545893 + 102006574 AGCD01054882;GBDF01303632;XM_005401561 XP_005401618 MODEL 9035835 protein-coding Dcaf5 DDB1 and CUL4 associated factor 5 INVOLVED IN protein catabolic process (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955466 1216966 1322704 + 102030400 AGCD01050696;AGCD01050697;AGCD01050698;AGCD01050699;AGCD01050700;GBBH01187496;XM_005399043;XM_005399044 XP_005399100;XP_005399101 MODEL 8703794 protein-coding Shisa8 shisa family member 8 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955413 27328632 27330304 - 102012751 AGCD01014501;AGCD01014502;GBBH01127137;GBDI01328292;XM_013511364 XP_013366818 MODEL 8705713 protein-coding Chka choline kinase alpha ENCODES a protein that exhibits ATP binding (ortholog); choline binding (ortholog); choline kinase activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); choline metabolic process (ortholog); ethanolamine metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colon adenoma (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog) NW_004955422 17710981 17766256 + 102006673 AGCD01022932;GBDF01051159;XM_005384285;XM_005384286 XP_005384342;XP_005384343 MODEL 9051365 protein-coding Rftn2 raftlin family member 2 INVOLVED IN dsRNA transport (ortholog); response to exogenous dsRNA (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955403 2982753 3030594 + 102013674 AGCD01001744;AGCD01001745;GBDF01055374;XM_005373263;XR_001233175 XP_005373320 MODEL 8780199 protein-coding Tiam2 TIAM Rac1 associated GEF 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955439 6942702 7147145 - 102019737 AGCD01035762;AGCD01035763;GBDJ01185825;XM_005390545;XM_005390546;XM_005390547;XM_013517329;XM_013517330 XP_005390602;XP_005390603;XP_005390604;XP_013372783;XP_013372784 MODEL 8802150 protein-coding Basp1 brain abundant membrane attached signal protein 1 ENCODES a protein that exhibits calmodulin binding (ortholog); protein domain specific binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); podocyte differentiation (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); astigmatism (ortholog); FOUND IN chromatin (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955426 6149756 6193222 + 102013190 AGCD01026147;AGCD01026148;GBCB01080674;XM_013514993 XP_013370447 MODEL 8883812 ncrna LOC102009257 uncharacterized LOC102009257 NW_004955460 11538025 11540811 + 102009257 AGCD01048633;GBDF01077791;XR_263059 MODEL 8744085 protein-coding Lrrc40 leucine rich repeat containing 40 ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955423 21706336 21749720 + 102009398 AGCD01023947;AGCD01023948;GBDF01123516;XM_005385259;XM_005385260;XM_013514398;XM_013514399 XP_005385316;XP_005385317;XP_013369852;XP_013369853 MODEL 9042676 ncrna LOC102021977 uncharacterized LOC102021977 NW_004955486 3990448 3991077 + 102021977 AGCD01059050;GBDF01308051;XR_263950 MODEL 8791222 protein-coding Cop1 COP1 E3 ubiquitin ligase ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of fatty acid biosynthetic process (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); Golgi membrane (ortholog) NW_004955406 15662546 15859306 - 102017093 AGCD01005981;AGCD01005982;AGCD01005983;AGCD01005984;GBCB01041975;GBCB01041978;XM_013520960;XM_013520966 XP_013376414;XP_013376420 MODEL 730469018 snorna SNORD38 Small nucleolar RNA SNORD38 9052013 pseudo LOC102010394 heterogeneous nuclear ribonucleoprotein K pseudogene NW_004955429 5495670 5504446 - 102010394 AGCD01028516;AGCD01028517 MODEL 8734711 protein-coding Fndc3b fibronectin type III domain containing 3B INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955420 2173804 2435324 + 102028420 AGCD01020588;AGCD01020589;AGCD01020590;AGCD01020591;AGCD01020592;AGCD01020593;AGCD01020594;AGCD01020595;GBDF01248543;XM_005383007;XM_013513455 XP_005383064;XP_013368909 MODEL 8796350 pseudo LOC102018639 polycomb complex protein BMI-1-like NW_004955529 1100230 1104601 - 102018639 AGCD01069673 MODEL 8819122 pseudo LOC102025833 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L pseudogene NW_004955519 4496858 4498898 - 102025833 AGCD01067983 MODEL 39132604 rrna 5S_rRNA 5S ribosomal RNA 39134464 misc_rna 7SK 7SK RNA 8992261 pseudo LOC102003345 tubulin alpha-1C chain-like NW_004955483 529540 535066 - 102003345 AGCD01057622;XR_263877 MODEL 9014812 protein-coding Ptgdr2 prostaglandin D2 receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); prostaglandin binding (ortholog); prostaglandin D receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); chemotaxis (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic asthma (ortholog) NW_004955511 5536602 5539944 - 102018518 AGCD01066567;AGCD01066568;GBDI01346045;XM_005408286 XP_005408343 MODEL 8799028 protein-coding Qars1 glutaminyl-tRNA synthetase 1 ENCODES a protein that exhibits glutamine-tRNA ligase activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN brain development (ortholog); glutaminyl-tRNA aminoacylation (ortholog); negative regulation of apoptotic signaling pathway (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955532 1093444 1100591 - 102008659 AGCD01070165;GBDF01001584;XM_005410187 XP_005410244 MODEL 39133321 snrna U4 U4 spliceosomal RNA 8719200 protein-coding Inpp4b inositol polyphosphate-4-phosphatase type II B ENCODES a protein that exhibits inositol-1,3,4-trisphosphate 4-phosphatase activity (ortholog); inositol-3,4-bisphosphate 4-phosphatase activity (ortholog); lipid binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); negative regulation of osteoclast differentiation (ortholog); phosphatidylinositol dephosphorylation (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955471 938005 1291695 + 102010359 AGCD01052969;AGCD01052970;AGCD01052971;AGCD01052972;AGCD01052973;AGCD01052974;GBDF01155666;XM_005400855;XM_005400857;XM_005400858 XP_005400912;XP_005400914;XP_005400915 MODEL 8921061 protein-coding Trpv3 transient receptor potential cation channel subfamily V member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN negative regulation of hair cycle (ortholog); positive regulation of calcium ion import (ortholog); response to temperature stimulus (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); autosomal dominant mutilating palmoplantar keratoderma with periorificial keratotic plaques (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); membrane (ortholog) NW_004955467 13246099 13276741 + 102024887 AGCD01051669;AGCD01051670;GBDF01247435;XM_013522250 XP_013377704 MODEL 8817914 protein-coding Podnl1 podocan like 1 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955415 32683256 32688736 - 102007425 AGCD01016730;GBDI01215428;XM_005381073;XM_013512208;XM_013512209;XM_013512210;XM_013512211 XP_005381130;XP_013367662;XP_013367663;XP_013367664;XP_013367665 MODEL 8712482 ncrna LOC102029753 uncharacterized LOC102029753 NW_004955421 15677291 15677895 + 102029753 AGCD01021987;GBCQ01116030;XR_260796 MODEL 8884763 protein-coding Etv6 ETS variant transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); hematopoietic stem cell proliferation (ortholog); mesenchymal cell apoptotic process (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog) NW_004955413 8698412 8912011 + 102012300 AGCD01013886;AGCD01013887;GBDI01290570;GBDJ01030940;XM_013511474 XP_013366928 MODEL 8741138 protein-coding Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ionotropic glutamate receptor binding (ortholog); protein phosphatase 2B binding (ortholog); INVOLVED IN positive regulation of AMPA receptor activity (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH antisocial personality disorder (ortholog); dilated cardiomyopathy (ortholog); esophageal cancer (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite membrane (ortholog); glutamatergic synapse (ortholog) NW_004955604 204482 221833 - 102021194 AGCD01076868;AGCD01076869;AGCD01076870;AGCD01076871;GBDF01255784;XM_013510086 XP_013365540 MODEL 730468982 snorna SNORA48 Small nucleolar RNA SNORA48 9048358 protein-coding LOC102003687 vomeronasal type-2 receptor 116-like NW_004955524 1903056 1933183 + 102003687 AGCD01068783;AGCD01068784;AGCD01068785;AGCD01068786;AGCD01068787;GBDF01097477;XM_013507191 XP_013362645 MODEL 10283863 ncrna LOC106148530 uncharacterized LOC106148530 NW_004955423 5159377 5159937 - 106148530 AGCD01023556;XR_001234068 MODEL 9014572 protein-coding Rag2 recombination activating 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K4me3 reader activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell homeostatic proliferation (ortholog); B cell lineage commitment (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH combined cellular and humoral immune defects with granulomas (ortholog); common variable immunodeficiency (ortholog); Eosinophilia (ortholog) NW_004955422 9867307 9869732 + 102003558 AGCD01022723;AY303201;GBDF01207383;XM_005384100 AAQ76995;XP_005384157 MODEL 8822421 protein-coding Ppfibp2 PPFIB scaffold protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN presynapse (ortholog) NW_004955414 23269050 23418804 + 102007883 AGCD01015496;AGCD01015497;GBDF01003858;XM_005380195;XM_005380196;XM_005380198;XM_013511943;XM_013511944;XM_013511945;XM_013511946;XM_013511948;XM_013511949;XM_013511950;XM_013511951;XM_013511952;XM_013511953 XP_005380252;XP_005380253;XP_005380255;XP_013367397;XP_013367398;XP_013367399;XP_013367400;XP_013367402;XP_013367403;XP_013367404;XP_013367405;XP_013367406;XP_013367407 MODEL 9050043 pseudo LOC102025125 golgin subfamily A member 7 pseudogene NW_004955419 5623710 5624828 + 102025125 AGCD01019830 MODEL 8960233 protein-coding LOC102024047 uncharacterized LOC102024047 NW_004955436 1581428 1589015 - 102024047 AGCD01033580;AGCD01033581;GBDF01020972;XM_013516580 XP_013372034 MODEL 8977964 protein-coding Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); positive regulation of autophagosome assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955435 12531651 12626969 + 102024373 AGCD01033150;AGCD01033151;AGCD01033152;AGCD01033153;AGCD01033154;AGCD01033155;AGCD01033156;AGCD01033157;AGCD01033158;GBDI01003986;XM_005388847;XM_005388848 XP_005388904;XP_005388905 MODEL 8972946 protein-coding Fndc4 fibronectin type III domain containing 4 INVOLVED IN apoptotic process (ortholog); heart development (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955469 9456964 9459721 - 102006566 AGCD01052503;GBCB01056372;GBDJ01318705;XM_005400508 XP_005400565 MODEL 8783987 pseudo LOC102025840 multifunctional protein ADE2 pseudogene NW_004955534 2738886 2740158 + 102025840 AGCD01070547 MODEL 9028490 protein-coding Ccdc62 coiled-coil domain containing 62 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); cellular response to estradiol stimulus (ortholog); estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955482 5911233 5948178 - 102026008 AGCD01057357;GBDI01254213;XM_005403067;XM_005403068;XM_005403069;XM_005403070;XM_005403071;XM_005403072;XM_005403073 XP_005403124;XP_005403125;XP_005403126;XP_005403127;XP_005403128;XP_005403129;XP_005403130 MODEL 8924544 protein-coding Tacr3 tachykinin receptor 3 ENCODES a protein that exhibits neuromedin K receptor activity (ortholog); tachykinin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); conditioned place preference (ortholog); drinking behavior (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amenorrhea (ortholog); FOUND IN axon terminus (ortholog); dendrite membrane (ortholog); dendritic spine head (ortholog) NW_004955496 5152134 5222565 + 102011678 AGCD01062346;AGCD01062347;AGCD01062348;GBDJ01006793;XM_005406230 XP_005406287 MODEL 9045287 protein-coding Slc16a8 solute carrier family 16 member 8 ASSOCIATED WITH COVID-19 (ortholog); macular degeneration (ortholog); sarcoma (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955413 24400621 24406754 - 102015095 AGCD01014364;AGCD01014365;AGCD01014366;GBBH01069709;GBCE01068470;XM_013511545 XP_013366999 MODEL 8757293 ncrna LOC102006203 uncharacterized LOC102006203 NW_004955404 45391064 45417702 - 102006203 AGCD01004443;GBDF01040437;XR_259340 MODEL 8824113 pseudo LOC102011208 40S ribosomal protein S12 pseudogene NW_004955489 506441 506882 - 102011208 AGCD01059807 MODEL 9033716 pseudo LOC102007704 soluble lamin-associated protein of 75 kDa pseudogene NW_004955441 15516264 15525569 - 102007704 AGCD01037250 MODEL 8743154 protein-coding Arid1a AT-rich interaction domain 1A ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); DNA binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cardiac chamber development (ortholog); cardiac muscle cell differentiation (ortholog); chromatin organization (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; pancreatic cancer pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH Acute Hepatitis (ortholog); adenocarcinoma (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromatin (ortholog); nBAF complex (ortholog); npBAF complex (ortholog) NW_004955452 6068631 6120759 + 102020876 AGCD01044088;AGCD01044089;GBDF01006095;XM_005394868;XM_005394871 XP_005394925;XP_005394928 MODEL 8917130 protein-coding Dennd1a DENN domain containing 1A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); endocytosis (ortholog); regulation of Rab protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); clathrin-coated vesicle membrane (ortholog); dendrite (ortholog) NW_004955419 4120095 4605002 + 102026324 AGCD01019754;AGCD01019755;AGCD01019756;AGCD01019757;AGCD01019758;AGCD01019759;AGCD01019760;GBDF01194053;XM_005382503;XM_013513192 XP_005382560;XP_013368646 MODEL 9008796 pseudo LOC102012863 FH1/FH2 domain-containing protein 1 pseudogene NW_004955485 3175160 3181031 - 102012863 AGCD01058533 MODEL 9002953 protein-coding Chkb choline kinase beta ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); megaconial type congenital muscular dystrophy (ortholog); muscular dystrophy (ortholog) NW_004955413 33588375 33592054 - 102007984 AGCD01014681;GBCE01056009;XM_005379593;XM_005379594 XP_005379650;XP_005379651 MODEL 10281190 protein-coding LOC106147439 translation initiation factor IF-2-like NW_004955559 1317431 1318953 + 106147439 AGCD01073640;GBDF01164377;XM_013509007 XP_013364461 MODEL 8987817 protein-coding Lrrc41 leucine rich repeat containing 41 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955464 11976259 11996588 + 102021536 AGCD01050169;AGCD01050170;GBDF01002957;XM_005398681;XM_013521589 XP_005398738;XP_013377043 MODEL 8882673 ncrna LOC102005132 uncharacterized LOC102005132 NW_004955470 10770420 10783689 - 102005132 AGCD01052876;AGCD01052877;GBDF01112853;XR_263499;XR_263500 MODEL 8808913 protein-coding LOC102005466 mas-related G-protein coupled receptor member X1 NW_004955476 26643 27677 - 102005466 AGCD01055190;XM_005401897 XP_005401954 MODEL 8792445 protein-coding Ednra endothelin receptor type A ENCODES a protein that exhibits endothelin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); aorta development (ortholog); PARTICIPATES IN endothelin signaling pathway; inflammatory response pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog); T-tubule (ortholog) NW_004955428 3062303 3114761 + 102011786 AGCD01027648;GBCE01097518;XM_005386667 XP_005386724 MODEL 39134465 misc_rna 7SK 7SK RNA 39131666 rrna 5S_rRNA 5S ribosomal RNA 39133905 misc_rna 7SK 7SK RNA 8975191 protein-coding Fndc5 fibronectin type III domain containing 5 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of brown fat cell differentiation (ortholog); response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); cervical cancer (ortholog); endomyocardial fibrosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); peroxisomal membrane (ortholog) NW_004955452 11120823 11127010 - 102030147 AGCD01044327;GBDJ01261961;XM_005395095;XM_005395096 XP_005395152;XP_005395153 MODEL 8872948 protein-coding S100a1 S100 calcium binding protein A1 ENCODES a protein that exhibits ATPase binding (ortholog); calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN ATP metabolic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of sprouting angiogenesis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); intracranial vasospasm (ortholog); Myocardial Ischemia (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955545 276868 281015 + 102016098 AGCD01071781;GBDI01063284;XM_005411426 XP_005411483 MODEL 8982280 protein-coding LOC102006204 hematopoietic prostaglandin D synthase NW_004955405 565811 595570 + 102006204 AGCD01004574;AGCD01004575;AGCD01004576;AGCD01004577;AGCD01004578;AGCD01004579;GBBH01172499;GBCE01033157;XM_013517297 XP_013372751 MODEL 8982017 protein-coding Shisa9 shisa family member 9 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN regulation of short-term neuronal synaptic plasticity (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendritic spine membrane (ortholog); glutamatergic synapse (ortholog) NW_004955442 5537372 5817076 - 102021804 AGCD01037566;AGCD01037567;AGCD01037568;AGCD01037569;AGCD01037570;GBDF01237808;XM_005391145;XM_005391146 XP_005391202;XP_005391203 MODEL 9043935 protein-coding Eva1a eva-1 homolog A, regulator of programmed cell death INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); cardiac left ventricle morphogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955424 10308586 10358477 + 102016071 AGCD01024511;AGCD01024512;GBCE01133628;XM_005385464;XM_005385465;XM_005385466;XM_005385467;XM_005385470;XM_005385471;XM_013514721;XM_013514722 XP_005385521;XP_005385522;XP_005385523;XP_005385524;XP_005385527;XP_005385528;XP_013370175;XP_013370176 MODEL 9059602 protein-coding Rfwd3 ring finger and WD repeat domain 3 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); p53 binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Fanconi anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955484 2824057 2857321 + 102025010 AGCD01058136;AGCD01058137;AGCD01058138;AGCD01058139;AGCD01058140;AGCD01058141;AGCD01058142;GBDJ01316140;XM_005403457;XM_005403458;XM_005403460;XM_005403461;XM_005403462;XM_013503864 XP_005403514;XP_005403515;XP_005403517;XP_005403518;XP_005403519;XP_013359318 MODEL 8789175 protein-coding Batf basic leucine zipper ATF-like transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN defense response to protozoan (ortholog); DNA damage response (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955523 42365 66103 - 102008763 AGCD01068430;AGCD01068431;AGCD01068432;AGCD01068433;GBDK01429928;XM_005409366 XP_005409423 MODEL 39133747 snorna SNORD39 Small nucleolar RNA SNORD55/SNORD39 8970244 protein-coding LOC102012465 transmembrane emp24 domain-containing protein 11 NW_004955514 560181 584300 - 102012465 AGCD01067014;GBDJ01333431;XM_005408689 XP_005408746 MODEL 39132611 rrna 5S_rRNA 5S ribosomal RNA 8901578 protein-coding LOC102025126 glutathione S-transferase omega-1 NW_004955485 6391364 6403112 - 102025126 AGCD01058618;GBCB01001864;GBDJ01025506;XM_005403783 XP_005403840 MODEL 9043617 pseudo LOC102003347 ras-related protein Rab-5A pseudogene NW_004955419 16896961 16899862 + 102003347 AGCD01020131;AGCD01020132;AGCD01020133 MODEL 8907057 protein-coding Ctnna2 catenin alpha 2 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); brain morphogenesis (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 9 (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955424 5985170 7055830 - 102012337 AGCD01024414;AGCD01024415;AGCD01024416;AGCD01024417;AGCD01024418;AGCD01024419;AGCD01024420;AGCD01024421;AGCD01024422;AGCD01024423;AGCD01024424;AGCD01024425;AGCD01024426;AGCD01024427;AGCD01024428;AGCD01024429;AGCD01024430;AGCD01024431;AGCD01024432;GBDF01085911;XM_005385453;XM_005385454 XP_005385510;XP_005385511 MODEL 8781061 protein-coding Qdpr quinoid dihydropteridine reductase ENCODES a protein that exhibits 6,7-dihydropteridine reductase activity (ortholog); identical protein binding (ortholog); NADH binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); liver development (ortholog); response to aluminum ion (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; dopamine biosynthetic pathway; epinephrine biosynthetic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); BH4-deficient hyperphenylalaninemia C (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955480 6646088 6666866 + 102024227 AGCD01056687;GBBH01163988;GBDF01119216;XM_005402546 XP_005402603 MODEL 9042789 protein-coding Inpp5a inositol polyphosphate-5-phosphatase A ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); inositol-polyphosphate 5-phosphatase activity (ortholog); INVOLVED IN inositol phosphate metabolic process (ortholog); negative regulation of calcium-mediated signaling (ortholog); negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955477 10148032 10384361 + 102026635 AGCD01055691;AGCD01055692;AGCD01055693;AGCD01055694;GBDF01085133;GBDK01129426;XM_005402047 XP_005402104 MODEL 8917398 protein-coding Podxl podocalyxin like INVOLVED IN cell migration (ortholog); epithelial tube formation (ortholog); leukocyte migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); carotid artery disease (ortholog); early-onset Parkinson's disease (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955410 36191797 36239970 + 102007635 AGCD01011422;GBBH01063522;GBCB01119929;XM_005377546 XP_005377603 MODEL 8922058 pseudo LOC102029760 60S ribosomal protein L6-like NW_004955423 17358161 17359091 - 102029760 AGCD01023852 MODEL 8701664 ncrna LOC102009258 uncharacterized LOC102009258 NW_004955410 7298409 7299909 + 102009258 AGCD01010712;GBDK01133796;XR_259823;XR_259824 MODEL 8930924 protein-coding Ccdc63 coiled-coil domain containing 63 INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955482 7673495 7707065 + 102027410 AGCD01057486;AGCD01057487;AGCD01057488;GBBH01094342;XM_005403166;XM_005403167 XP_005403223;XP_005403224 MODEL 8788500 protein-coding Slc16a9 solute carrier family 16 member 9 ENCODES a protein that exhibits carnitine transmembrane transporter activity (ortholog); creatine transmembrane transporter activity (ortholog); INVOLVED IN carnitine transmembrane transport (ortholog); creatine transmembrane transport (ortholog); urate metabolic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); testicular germ cell cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955425 13249903 13300705 - 102013521 AGCD01025529;GBCQ01010027;XM_005385930;XM_005385931;XM_005385932;XM_005385933;XM_013514881;XM_013514882 XP_005385987;XP_005385988;XP_005385989;XP_005385990;XP_013370335;XP_013370336 MODEL 9068204 pseudo LOC102021979 26S proteasome non-ATPase regulatory subunit 14 pseudogene NW_004955488 2643464 2644330 - 102021979 AGCD01059549 MODEL 10081613 ncrna LOC106148531 uncharacterized LOC106148531 NW_004955423 1784900 1785433 + 106148531 AGCD01023455;GBDI01316701;XR_001234069 MODEL 8710719 protein-coding Fndc7 fibronectin type III domain containing 7 ASSOCIATED WITH acute myeloid leukemia (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955435 12185187 12213242 + 102020045 AGCD01033135;AGCD01033136;XM_005388833 XP_005388890 MODEL 8867797 protein-coding LOC102003691 vomeronasal type-2 receptor 116-like NW_004955532 145761 208308 + 102003691 AGCD01070101;AGCD01070102;AGCD01070103;AGCD01070104;AGCD01070105;AGCD01070106;AGCD01070107;AGCD01070108;AGCD01070109;AGCD01070110;XM_013507569 XP_013363023 MODEL 8735155 protein-coding Copa coat protein complex I subunit alpha ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN pancreatic juice secretion (ortholog); protein localization to axon (ortholog); protein localization to cell leading edge (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arthritis (ortholog); autoimmune disease (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955468 12062942 12111048 - 102017651 AGCD01052140;AGCD01052141;AGCD01052142;AGCD01052143;GBDK01074088;XM_005400206;XM_005400207 XP_005400263;XP_005400264 MODEL 8906016 protein-coding LOC102018640 melanoma-associated antigen B1-like NW_004955531 724330 725875 + 102018640 AGCD01070007;XM_005410133 XP_005410190 MODEL 8787920 protein-coding Rai1 retinoic acid induced 1 INVOLVED IN circadian regulation of gene expression (ortholog); negative regulation of multicellular organism growth (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955577 185404 296613 - 102015065 AGCD01075384;AGCD01075385;AGCD01075386;AGCD01075387;AGCD01075388;GBBH01207954;XM_005413962;XM_005413965;XM_005413966;XM_013509617;XM_013509618;XM_013509619;XR_265076 XP_005414019;XP_005414022;XP_005414023;XP_013365071;XP_013365072;XP_013365073 MODEL 9004926 protein-coding Arid1b AT-rich interaction domain 1B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); dendritic cell dendrite assembly (ortholog); dendritic spine development (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; pancreatic cancer pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN nBAF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955439 5041111 5454692 - 102018225 AGCD01035723;AGCD01035724;AGCD01035725;AGCD01035726;AGCD01035727;AGCD01035728;GBCQ01000937;GBDF01127492;XM_013517332 XP_013372786 MODEL 39133322 snrna U4 U4 spliceosomal RNA 8965650 ncrna LOC102024049 uncharacterized LOC102024049 NW_004955537 9950 26774 - 102024049 AGCD01070845;AGCD01070846;AGCD01070847;GBDF01112305;XR_264768 MODEL 8736669 protein-coding Ptgds prostaglandin D2 synthase ENCODES a protein that exhibits fatty acid binding (ortholog); prostaglandin-D synthase activity (ortholog); retinoid binding (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); gene expression (ortholog); negative regulation of male germ cell proliferation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH arteriosclerosis (ortholog); Breast Cancer, Familial (ortholog); carotid artery disease (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); rough endoplasmic reticulum (ortholog) NW_004955513 5009530 5012781 + 102028669 AGCD01066949;AGCD01066950;GBCQ01008032;XM_005408569 XP_005408626 MODEL 8851020 protein-coding Dcaf6 DDB1 and CUL4 associated factor 6 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); cervical cancer (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955462 9036710 9176981 - 102021858 AGCD01049332;AGCD01049333;GBBH01050429;GBCB01004394;XM_013521421 XP_013376875 MODEL 8959460 protein-coding Trpv4 transient receptor potential cation channel subfamily V member 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); ATP export (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); anxiety disorder (ortholog); Arachnodactyly (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) NW_004955455 8744865 8781644 + 102018566 AGCD01045908;AGCD01045909;GBCQ01123903;XM_005396446;XM_005396447;XM_013520488 XP_005396503;XP_005396504;XP_013375942 MODEL 39134466 misc_rna 7SK 7SK RNA 8869333 protein-coding LOC102005144 cytidine monophosphate-N-acetylneuraminic acid hydroxylase NW_004955483 1836388 2025256 + 102005144 AGCD01057655;AGCD01057656;AGCD01057657;AGCD01057658;AGCD01057659;AGCD01057660;AGCD01057661;AGCD01057662;AGCD01057663;AGCD01057664;AGCD01057665;AGCD01057666;GBCE01108999;XM_005403351;XM_005403352;XM_005403353;XM_013503835;XM_013503836;XM_013503837 XP_005403408;XP_005403409;XP_005403410;XP_013359289;XP_013359290;XP_013359291 MODEL 8781536 protein-coding Tacstd2 tumor associated calcium signal transducer 2 INVOLVED IN negative regulation of branching involved in ureteric bud morphogenesis (ortholog); negative regulation of cell motility (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); endometriosis (ortholog); gelatinous drop-like corneal dystrophy (ortholog); FOUND IN basal plasma membrane (ortholog); extracellular region (ortholog); lateral plasma membrane (ortholog) NW_004955464 1282989 1284785 + 102017552 AGCD01049946;GBCQ01007569;XM_005398491 XP_005398548 MODEL 39131314 protein-coding CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 9038826 protein-coding Ticam1 toll like receptor adaptor molecule 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH amblyopia (ortholog); Anisocoria (ortholog); brain disease (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955495 4197083 4204999 + 102004084 AGCD01061902;GBDI01013112;XM_005405780;XM_005405782 XP_005405837;XP_005405839 MODEL 9019350 protein-coding LOC102011211 cationic trypsin-3-like NW_004955494 1248108 1252850 + 102011211 AGCD01061393;XM_005405394 XP_005405451 MODEL 39133906 misc_rna 7SK 7SK RNA 9000120 pseudo LOC102010397 forkhead box protein H1 pseudogene NW_004955431 1005823 1006729 - 102010397 AGCD01029888 MODEL 730469500 snorna SNORA48 Small nucleolar RNA SNORA48 8880453 protein-coding LOC102006209 uncharacterized LOC102006209 NW_004955406 38742352 38743020 + 102006209 AGCD01006609;XM_005375478 XP_005375535 MODEL 8812503 protein-coding Pphln1 periphilin 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN constitutive heterochromatin formation (ortholog); negative regulation of gene expression, epigenetic (ortholog); negative regulation of type I interferon production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955500 1744968 1892056 + 102003041 AGCD01063681;AGCD01063682;AGCD01063683;AGCD01063684;AGCD01063685;AGCD01063686;AGCD01063687;AGCD01063688;GBBH01140452;GBDF01047222;XM_013505665;XM_013505666;XM_013505667;XM_013505668;XM_013505670;XM_013505671 XP_013361119;XP_013361120;XP_013361121;XP_013361122;XP_013361124;XP_013361125 MODEL 8891894 protein-coding Dtwd2 DTW motif tRNA-uridine aminocarboxypropyltransferase 2 ENCODES a protein that exhibits tRNA-uridine aminocarboxypropyltransferase activity (ortholog); INVOLVED IN glycoRNA biosynthetic process (ortholog); tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955408 38497442 38609561 - 102029939 AGCD01009041;AGCD01009042;AGCD01009043;AGCD01009044;AGCD01009045;AGCD01009046;AGCD01009047;GBBH01226018;GBCB01111751;XM_013506983 XP_013362437 MODEL 8998512 protein-coding Dennd1b DENN domain containing 1B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endocytic recycling (ortholog); positive regulation of T-helper 2 cell cytokine production (ortholog); regulation of immune response (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog) NW_004955406 34021508 34241735 - 102030037 AGCD01006496;AGCD01006497;AGCD01006498;GBCB01075374;GBDI01111475;XM_013521889 XP_013377343 MODEL 8781935 protein-coding Lrrc42 leucine rich repeat containing 42 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955464 5278474 5299125 - 102006755 AGCD01050003;AGCD01050004;GBBH01228032;XM_005398542 XP_005398599 MODEL 8951818 protein-coding Chl1 cell adhesion molecule L1 like ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axon guidance (ortholog); axon regeneration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); epilepsy (ortholog); esophageal cancer (ortholog); FOUND IN apical part of cell (ortholog); dendrite (ortholog) NW_004955421 12763432 12957852 - 102024015 AGCD01021928;AGCD01021929;AGCD01021930;AGCD01021931;AGCD01021932;AGCD01021933;GBDI01106875;XM_005383757;XM_005383758;XM_005383759;XM_005383760;XM_005383761;XM_013513790;XM_013513791;XM_013513792 XP_005383814;XP_005383815;XP_005383816;XP_005383817;XP_005383818;XP_013369244;XP_013369245;XP_013369246 MODEL 8785102 pseudo LOC102012468 ribose-phosphate pyrophosphokinase 1-like NW_004955519 2455691 2458425 + 102012468 AGCD01067931;AGCD01067932 MODEL 8774473 protein-coding Rfx1 regulatory factor X1 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 32710135 32737918 - 102008620 AGCD01016731;AGCD01016732;GBCC01047226;XM_005381077;XM_013512197 XP_005381134;XP_013367651 MODEL 8725211 pseudo LOC102005472 CWF19-like protein 2 NW_004955481 1830281 1834787 + 102005472 AGCD01056855 MODEL 8784143 ncrna LOC102006577 uncharacterized LOC102006577 NW_004955417 25228937 25242091 - 102006577 AGCD01018475;GBDF01078277;XR_260491 MODEL 8718145 pseudo LOC102025841 60S ribosomal protein L26-like 1 pseudogene NW_004955437 18774210 18776027 + 102025841 AGCD01034814 MODEL 8834264 protein-coding LOC102003349 uncharacterized LOC102003349 NW_004955420 23430746 23448623 - 102003349 AGCD01021246;AGCD01021247;AGCD01021248;GBDJ01304436;XM_005383606 XP_005383663 MODEL 8787949 protein-coding Ednrb endothelin receptor type B ENCODES a protein that exhibits endothelin receptor activity (ortholog); peptide hormone binding (ortholog); type 1 angiotensin receptor binding (ortholog); INVOLVED IN aldosterone metabolic process (ortholog); calcium ion transmembrane transport (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase signaling pathway; endothelin signaling pathway; inflammatory response pathway; ASSOCIATED WITH ABCD syndrome (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog) NW_004955404 29394253 29425358 + 102015277 AGCD01003975;GBCQ01024197;XM_005374148 XP_005374205 MODEL 8765516 pseudo LOC102007705 tumor suppressor p53-binding protein 1-like NW_004955548 2402607 2409082 + 102007705 AGCD01072395 MODEL 39131667 rrna 5S_rRNA 5S ribosomal RNA 8853293 protein-coding Qki QKI, KH domain containing RNA binding ENCODES a protein that exhibits internal N(7)-methylguanine-containing RNA reader activity (ortholog); miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); axon ensheathment (ortholog); intracellular mRNA localization (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); demyelinating disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955439 17925205 18079727 - 102005844 AGCD01036045;AGCD01036046;AGCD01036047;AGCD01036048;AGCD01036049;GBDJ01179084;XM_013517307 XP_013372761 MODEL 8742225 protein-coding Inpp5b inositol polyphosphate-5-phosphatase B ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); in utero embryonic development (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955452 15628852 15682514 - 102015597 AGCD01044491;AGCD01044492;AGCD01044493;GBBH01016131;XM_005395221;XM_005395223;XM_013519687 XP_005395278;XP_005395280;XP_013375141 MODEL 8745521 ncrna LOC102009260 uncharacterized LOC102009260 NW_004955463 9987660 9990965 - 102009260 AGCD01049803;GBDF01112751;XR_263165 MODEL 8975448 protein-coding LOC102012865 olfactory receptor 4C12-like NW_004955422 140434 143718 - 102012865 AGCD01022395;XM_005383937 XP_005383994 MODEL 10177599 ncrna LOC106148532 uncharacterized LOC106148532 NW_004955423 15316501 15320862 + 106148532 AGCD01023804;GBDJ01024417;XR_001234071 MODEL 8949014 protein-coding Shisal1 shisa like 1 ASSOCIATED WITH lung cancer (ortholog) NW_004955413 29084441 29185524 - 102023138 AGCD01014576;AGCD01014577;AGCD01014578;GBCQ01175065;XM_005379460;XM_005379461;XM_005379462;XM_005379463 XP_005379517;XP_005379518;XP_005379519;XP_005379520 MODEL 8864639 protein-coding Eva1b eva-1 homolog B NW_004955452 14296607 14298331 - 102004667 AGCD01044463;GBDK01020136;XM_013519505 XP_013374959 MODEL 8814627 protein-coding Batf2 basic leucine zipper ATF-like transcription factor 2 INVOLVED IN defense response to protozoan (ortholog); myeloid dendritic cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); melanoma (ortholog); pulmonary tuberculosis (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) NW_004955422 20188965 20195886 + 102021137 AGCD01023068;GBCE01003452;XM_005384530;XM_005384531 XP_005384587;XP_005384588 MODEL 39132613 rrna 5S_rRNA 5S ribosomal RNA 9007408 protein-coding LOC102025127 somatostatin-like NW_004955420 20082135 20083273 + 102025127 AGCD01021071;XM_005383250 XP_005383307 MODEL 8801845 protein-coding Rai14 retinoic acid induced 14 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955426 19831811 19980717 + 102029537 AGCD01026554;AGCD01026555;AGCD01026556;AGCD01026557;AGCD01026558;AGCD01026559;AGCD01026560;GBBH01006738;XM_005386173;XM_005386174;XM_005386175;XM_013514963 XP_005386230;XP_005386231;XP_005386232;XP_013370417 MODEL 9039255 protein-coding Arid2 AT-rich interaction domain 2 ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); DNA binding (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); chromatin remodeling (ortholog); circulatory system development (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN nucleoplasm (ortholog); SWI/SNF complex (ortholog) NW_004955500 4998555 5177180 + 102022621 AGCD01063822;AGCD01063823;AGCD01063824;GBCB01087730;GBDK01183270;XM_013505655 XP_013361109 MODEL 8773751 protein-coding Ctnna3 catenin alpha 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); regulation of heart rate by cardiac conduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular dysplasia 13 (ortholog); asthma (ortholog); FOUND IN adherens junction (ortholog); fascia adherens (ortholog); lamellipodium (ortholog) NW_004955425 18623645 20126200 - 102028655 AGCD01025676;AGCD01025677;AGCD01025678;AGCD01025679;AGCD01025680;AGCD01025681;AGCD01025682;AGCD01025683;AGCD01025684;AGCD01025685;AGCD01025686;AGCD01025687;AGCD01025688;AGCD01025689;AGCD01025690;AGCD01025691;AGCD01025692;AGCD01025693;AGCD01025694;AGCD01025695;AGCD01025696;AGCD01025697;AGCD01025698;AGCD01025699;AGCD01025700;AGCD01025701;AGCD01025702;AGCD01025703;AGCD01025704;AGCD01025705;AGCD01025706;AGCD01025707;AGCD01025708;AGCD01025709;AGCD01025710;AGCD01025711;AGCD01025712;AGCD01025713;AGCD01025714;AGCD01025715;AGCD01025716;GBCB01051182;XM_005385969;XM_005385970;XM_013514887;XM_013514888 XP_005386026;XP_005386027;XP_013370341;XP_013370342 MODEL 8860508 protein-coding Wscd1 WSC domain sialate O sulfotransferase 1 ENCODES a protein that exhibits sulfotransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955467 11642318 11684265 + 102030293 AGCD01051614;AGCD01051615;AGCD01051616;GBDJ01225220;XM_005399657;XM_005399659 XP_005399714;XP_005399716 MODEL 8931334 protein-coding Podxl2 podocalyxin like 2 INVOLVED IN leukocyte tethering or rolling (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955429 15968877 15995617 - 102028778 AGCD01028824;GBCE01187822;XM_013515485 XP_013370939 MODEL 8772520 protein-coding LOC102029762 zinc finger protein 14-like NW_004955499 146840 149919 - 102029762 AGCD01063189;GBDJ01019074;XM_013505557 XP_013361011 MODEL 9028853 protein-coding S100a10 S100 calcium binding protein A10 ENCODES a protein that exhibits lipid binding (ortholog); protein homodimerization activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN membrane raft assembly (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); depressive disorder (ortholog); FOUND IN AnxA2-p11 complex (ortholog); cell surface (ortholog); membrane raft (ortholog) NW_004955589 435798 446361 + 102010849 AGCD01076171;GBCQ01009914;XM_005414536 XP_005414593 MODEL 8830147 protein-coding LOC102021985 GSK-3-binding protein FRAT2 NW_004955422 2871445 2965411 - 102021985 AGCD01022495;AGCD01022496;GBDI01224871;XM_013514199 XP_013369653 MODEL 8776278 protein-coding Ccdc65 coiled-coil domain containing 65 INVOLVED IN brain development (ortholog); cell population proliferation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955500 7733054 7744135 + 102009296 AGCD01063943;AGCD01063944;GBDF01214263;XM_005406671;XM_005406672;XM_013505645 XP_005406728;XP_005406729;XP_013361099 MODEL 8827000 protein-coding Slc17a1 solute carrier family 17 member 1 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); INVOLVED IN sodium-dependent phosphate transport (ortholog); urate metabolic process (ortholog); urate transport (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955483 1269153 1296329 + 102029082 AGCD01057645;GBDF01022721;XM_005403339;XM_005403340;XM_005403341;XM_013503757 XP_005403396;XP_005403397;XP_005403398;XP_013359211 MODEL 8844587 protein-coding LOC102003692 cytoplasmic FMR1-interacting protein 1 NW_004955533 1057633 1203027 + 102003692 AGCD01070337;AGCD01070338;AGCD01070339;AGCD01070340;AGCD01070341;AGCD01070342;AGCD01070343;AGCD01070344;AGCD01070345;AGCD01070346;AGCD01070347;AGCD01070348;GBBH01063748;GBDF01122441;XM_013507676 XP_013363130 MODEL 8964264 pseudo LOC102018643 tubulin alpha-1 chain-like NW_004955534 1689738 1691268 - 102018643 AGCD01070507 MODEL 730469034 snorna SNORA48 Small nucleolar RNA SNORA48 9016378 protein-coding Elapor2 endosome-lysosome associated apoptosis and autophagy regulator family member 2 INVOLVED IN positive regulation of BMP signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955410 47021 98055 + 102027498 AGCD01010580;AGCD01010581;AGCD01010582;GBDK01130372;XM_005377188 XP_005377245 MODEL 8904253 ncrna LOC102024051 uncharacterized LOC102024051 NW_004955540 1528360 1541262 - 102024051 AGCD01071304;GBDF01156252;XR_001232115;XR_001232116 MODEL 8744767 protein-coding LOC102006578 olfactory receptor 1Q1-like NW_004955419 5347299 5348225 - 102006578 AGCD01019802;XM_005382525 XP_005382582 MODEL 39134467 misc_rna 7SK 7SK RNA 8971245 protein-coding Dcaf7 DDB1 and CUL4 associated factor 7 ASSOCIATED WITH Craniofacial Abnormalities (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog); nuclear matrix (ortholog) NW_004955478 8213679 8241214 - 102025574 AGCD01056015;AGCD01056016;GBDI01009756;XM_005402206;XR_263709 XP_005402263 MODEL 8835147 protein-coding Trpv6 transient receptor potential cation channel subfamily V member 6 ENCODES a protein that exhibits calcium channel activity (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion import (ortholog); calcium ion import across plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); craniosynostosis (ortholog); genetic disease (ortholog); FOUND IN calcium channel complex (ortholog); plasma membrane (ortholog) NW_004955494 820801 835931 - 102004942 AGCD01061385;AGCD01061386;GBCE01039170;XM_005405387 XP_005405444 MODEL 8915950 protein-coding LOC102005146 olfactory receptor 13C8-like NW_004955419 21810593 21816934 - 102005146 AGCD01020283;AGCD01020284;XM_005382788 XP_005382845 MODEL 8866803 protein-coding Tada1 transcriptional adaptor 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955462 10057468 10073871 + 102028065 AGCD01049350;AGCD01049351;GBDF01082667;XM_005398237;XM_013521452 XP_005398294;XP_013376906 MODEL 8901153 protein-coding LOC102003352 inositol 1,4,5-trisphosphate receptor type 1 NW_004955421 8603264 8928051 - 102003352 AGCD01021821;AGCD01021822;AGCD01021823;AGCD01021824;AGCD01021825;AGCD01021826;GBCE01055382;GBDF01285678;XM_013513709;XM_013513710;XM_013513711;XM_013513712;XM_013513713;XM_013513714;XM_013513715 XP_013369163;XP_013369164;XP_013369165;XP_013369166;XP_013369167;XP_013369168;XP_013369169 MODEL 9043098 pseudo LOC102011212 rRNA-processing protein FCF1 homolog pseudogene NW_004955494 5808071 5843724 - 102011212 AGCD01061526 MODEL 39133907 misc_rna 7SK 7SK RNA 8787087 protein-coding LOC102010401 carboxylesterase 1D-like NW_004955433 13332713 13350578 - 102010401 AGCD01031684;AGCD01031685;XM_013516104 XP_013371558 MODEL 8842657 protein-coding Copb1 coat protein complex I subunit beta 1 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Baralle-Macken Syndrome (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955414 29626314 29661453 - 102023143 AGCD01015709;AGCD01015710;GBBH01065781;XM_005380331 XP_005380388 MODEL 8718189 pseudo LOC102029763 heterochromatin protein 1-binding protein 3 pseudogene NW_004955424 22152445 22160546 + 102029763 AGCD01024934;XR_261113 MODEL 8719739 protein-coding LOC102005152 olfactory receptor 2A2-like NW_004955491 447741 450169 + 102005152 AGCD01060335;XM_005404725 XP_005404782 MODEL 8882764 pseudo LOC102006212 adenosine deaminase-like protein pseudogene NW_004955407 20334537 20335032 - 102006212 AGCD01007327 MODEL 39133324 snrna U4 U4 spliceosomal RNA 8762031 protein-coding Dtx1 deltex E3 ubiquitin ligase 1 ENCODES a protein that exhibits Notch binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glial cell differentiation (ortholog); negative regulation of neuron differentiation (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); disease of cellular proliferation (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955482 9416456 9447265 + 102007663 AGCD01057569;AGCD01057570;GBCE01117061;GBCQ01064129;XM_013503713 XP_013359167 MODEL 9042516 pseudo LOC102012474 39S ribosomal protein L18, mitochondrial pseudogene NW_004955540 2266992 2270829 - 102012474 AGCD01071316 MODEL 10065705 ncrna LOC106147440 uncharacterized LOC106147440 NW_004955408 14367950 14384000 + 106147440 AGCD01008394;GBDI01054270;XR_001232342 MODEL 8799221 protein-coding Ppia peptidylprolyl isomerase A ENCODES a protein that exhibits cyclosporin A binding (ortholog); heparan sulfate binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process (ortholog); cell adhesion molecule production (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); atopic dermatitis (ortholog); Bell's palsy (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955456 7381923 7383203 - 102016448 AGCD01046413;GBBH01002379;GBCQ01008235;XM_005396653 XP_005396710 MODEL 8714607 protein-coding Dennd1c DENN domain containing 1C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955495 3139411 3148389 + 102010278 AGCD01061828;GBBH01150256;XM_005405710;XM_005405711;XM_013505301;XM_013505302;XM_013505303;XM_013505304;XM_013505305 XP_005405767;XP_005405768;XP_013360755;XP_013360756;XP_013360757;XP_013360758;XP_013360759 MODEL 8769812 protein-coding Ptger1 prostaglandin E receptor 1 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); maternal process involved in parturition (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); allergic asthma (ortholog); Animal Mammary Neoplasms (ortholog) NW_004955415 33063052 33067580 - 102016702 AGCD01016748;GBDJ01401845;XM_005381104 XP_005381161 MODEL 8905968 protein-coding Rfx2 regulatory factor X2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN acrosome assembly (ortholog); cellular response to leukemia inhibitory factor (ortholog); cilium assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955495 3414737 3485393 + 102017583 AGCD01061856;AGCD01061857;AGCD01061858;AGCD01061859;AGCD01061860;AGCD01061861;GBDF01044808;XM_005405732;XM_005405733;XM_005405735;XM_005405736;XM_005405737;XM_005405739;XM_005405740;XM_013505325;XM_013505326 XP_005405789;XP_005405790;XP_005405792;XP_005405793;XP_005405794;XP_005405796;XP_005405797;XP_013360779;XP_013360780 MODEL 8890107 pseudo LOC102024054 60S ribosomal protein L36 pseudogene NW_004955545 2470677 2471253 - 102024054 AGCD01071903 MODEL 8917974 protein-coding Ticam2 toll like receptor adaptor molecule 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to virus (ortholog); negative regulation of chemokine (C-C motif) ligand 5 production (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); Coronavirus infectious disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955411 31010373 31042321 - 102003848 AGCD01012265;GBDJ01125148;XM_013510720 XP_013366174 MODEL 9062166 protein-coding Edrf1 erythroid differentiation regulatory factor 1 INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog) NW_004955477 3604186 3648061 + 102008095 AGCD01055557;AGCD01055558;AGCD01055559;GBDF01187670;XM_005401992;XM_005401993;XM_005401994 XP_005402049;XP_005402050;XP_005402051 MODEL 8853225 ncrna LOC102007708 uncharacterized LOC102007708 NW_004955443 5130686 5141731 - 102007708 AGCD01038232;GBCB01015177;XR_262176 MODEL 39131668 rrna 5S_rRNA 5S ribosomal RNA 8981975 protein-coding Dennd2a DENN domain containing 2A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955494 2768097 2831809 + 102021140 AGCD01061450;AGCD01061451;GBCE01111512;GBDK01245228;XM_013505021 XP_013360475 MODEL 616940634 snorna SNORD41 Small nucleolar RNA SNORD41 8789846 protein-coding Fndc8 fibronectin type III domain containing 8 INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN perinuclear theca (ortholog) NW_004955481 9812402 9820070 + 102010904 AGCD01057119;GBDF01002286;XM_005402863 XP_005402920 MODEL 10389235 ncrna LOC106148533 uncharacterized LOC106148533 NW_004955423 28185252 28195028 + 106148533 AGCD01024145;GBDK01199315;XR_001234072;XR_001234073;XR_001234074 MODEL 39133908 misc_rna 7SK 7SK RNA 8829995 protein-coding Batf3 basic leucine zipper ATF-like transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN dendritic cell differentiation (ortholog); myeloid dendritic cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955815 2852 11035 + 102014633 AGCD01078403;GBBH01214177;GBCE01089580;XM_005415122 XP_005415179 MODEL 8792231 protein-coding Lrrc43 leucine rich repeat containing 43 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog) NW_004955482 6366437 6375697 - 102029516 AGCD01057388;GBCE01085230;GBDF01081449;XM_013503751;XM_013503752;XR_001231000 XP_013359205;XP_013359206 MODEL 8899846 protein-coding LOC102005475 E3 ubiquitin-protein ligase Topors-like NW_004955419 22119355 22127230 - 102005475 AGCD01020294;AGCD01020295;GBDF01224788;XM_005382789 XP_005382846 MODEL 730469487 snorna SNORA48 Small nucleolar RNA SNORA48 8870051 pseudo LOC102025849 zinc finger protein 83-like NW_004955558 7510 10389 + 102025849 AGCD01073338 MODEL 8932685 protein-coding Cactin cactin, spliceosome C complex subunit INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955495 5561359 5571945 - 102006364 AGCD01062014;GBDI01221201;XM_005405877 XP_005405934 MODEL 8885335 protein-coding Rai2 retinoic acid induced 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); dextrocardia (ortholog) NW_004955519 494463 553839 + 102030562 AGCD01067876;AGCD01067877;GBCE01153611;GBDJ01234060;XM_005409127 XP_005409184 MODEL 39134468 misc_rna 7SK 7SK RNA 9049610 ncrna LOC102009262 uncharacterized LOC102009262 NW_004955411 32414637 32423545 - 102009262 AGCD01012315;AGCD01012316;AGCD01012317;GBCQ01032791;XR_001232824;XR_259951 MODEL 8794738 pseudo LOC102012868 ubiquitin-like modifier-activating enzyme 1 pseudogene NW_004955494 8277150 8278221 - 102012868 AGCD01061582 MODEL 8987629 protein-coding Inpp5d inositol polyphosphate-5-phosphatase D ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-4,5-bisphosphate 5-phosphatase activity (ortholog); inositol-polyphosphate 5-phosphatase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); immunoglobulin mediated immune response (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN erythropoietin signaling pathway; Fc epsilon receptor mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Experimental Liver Cirrhosis (ortholog); Paget disease of bone (ortholog); FOUND IN actin filament (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955453 2938659 3037211 - 102011272 AGCD01044645;AGCD01044646;AGCD01044647;AGCD01044648;GBDI01180043;XM_005395358;XM_005395359 XP_005395415;XP_005395416 MODEL 8879930 pseudo LOC102021986 high mobility group protein B1 pseudogene NW_004955491 7562214 7570310 + 102021986 AGCD01060601 MODEL 8840932 ncrna LOC102018644 uncharacterized LOC102018644 NW_004955536 3109313 3110744 + 102018644 AGCD01070809;GBDF01306563;XR_001232063;XR_001232064 MODEL 8901604 protein-coding Slc17a2 solute carrier family 17 member 2 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); urate transmembrane transporter activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); liver cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955483 1185775 1201851 + 102027187 AGCD01057644;XM_005403332;XM_005403333;XM_005403334 XP_005403389;XP_005403390;XP_005403391 MODEL 8865810 protein-coding Shisal2a shisa like 2A ASSOCIATED WITH urinary bladder cancer (ortholog) NW_004955464 6520481 6547181 - 102016574 AGCD01050029;AGCD01050030;GBDJ01051237;XM_005398572;XM_005398573 XP_005398629;XP_005398630 MODEL 39131599 snorna SNORD42 Small nucleolar RNA SNORD42 39132620 rrna 5S_rRNA 5S ribosomal RNA 8787326 protein-coding LOC102025135 epithelial chloride channel protein-like NW_004955423 7433747 7456786 - 102025135 AGCD01023601;AGCD01023602;AGCD01023603;GBDF01286325;XM_005385357 XP_005385414 MODEL 8999165 protein-coding Copb2 coat protein complex I subunit beta 2 ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN COPI vesicle coat (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955508 6201989 6231840 + 102025604 AGCD01065917;AGCD01065918;GBDF01046821;XM_005407784 XP_005407841 MODEL 10236561 ncrna LOC106147441 uncharacterized LOC106147441 NW_004955559 730730 731738 + 106147441 AGCD01073609;GBCQ01130735;XR_001232343 MODEL 8806811 protein-coding Ppib peptidylprolyl isomerase B ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); RNA polymerase binding (ortholog); INVOLVED IN bone development (ortholog); host-mediated activation of viral genome replication (ortholog); host-mediated activation of viral process (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); melanosome (ortholog) NW_004955450 11241279 11246628 + 102019007 AGCD01042652;GBCE01002181;XM_005393760 XP_005393817 MODEL 8876586 protein-coding Arid3a AT-rich interaction domain 3A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane raft (ortholog); nucleoplasm (ortholog) NW_004955495 6884077 6912625 - 102015540 AGCD01062100;GBDJ01401900;XM_005406008;XM_005406009;XM_005406010;XM_005406011;XM_005406012;XM_013505104;XM_013505105 XP_005406065;XP_005406066;XP_005406067;XP_005406068;XP_005406069;XP_013360558;XP_013360559 MODEL 9067402 protein-coding Dtx2 deltex E3 ubiquitin ligase 2 INVOLVED IN Notch signaling pathway (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955456 15034214 15070521 + 102009689 AGCD01046661;GBDK01084193;XM_005396816;XM_005396817;XM_005396820;XM_013520604;XM_013520605;XM_013520606;XM_013520607;XM_013520608;XM_013520609 XP_005396873;XP_005396874;XP_005396877;XP_013376058;XP_013376059;XP_013376060;XP_013376061;XP_013376062;XP_013376063 MODEL 8915717 protein-coding Wscd2 WSC domain sialate O sulfotransferase 2 ENCODES a protein that exhibits sulfotransferase activity (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955455 9433628 9549862 + 102022566 AGCD01045921;AGCD01045922;AGCD01045923;GBBH01097863;GBCQ01173215;XM_013520454;XM_013520455 XP_013375908;XP_013375909 MODEL 8902180 protein-coding Ctnnal1 catenin alpha like 1 INVOLVED IN Rho protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955419 17975242 18028100 + 102004283 AGCD01020168;GBBH01209679;XM_005382935 XP_005382992 MODEL 8844691 protein-coding Qng1 Q-nucleotide N-glycosylase 1 ENCODES a protein that exhibits queuosine nucleosidase activity (ortholog); INVOLVED IN nucleoside salvage (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955432 3273161 3284261 + 102006267 AGCD01030647;GBDF01126625;GBDF01126628;XM_013516079 XP_013371533 MODEL 8756518 protein-coding Pof1b POF1B actin binding protein ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); bicellular tight junction (ortholog) NW_004955529 4137746 4224542 - 102024377 AGCD01069818;AGCD01069819;AGCD01069820;GBCC01000347;XM_005410090;XM_013507535;XM_013507536 XP_005410147;XP_013362989;XP_013362990 MODEL 8887810 protein-coding Trrap transformation/transcription domain associated protein ENCODES a protein that exhibits chromatin binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); aphasia (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955460 14641891 14761641 + 102003739 AGCD01048757;AGCD01048758;AGCD01048759;AGCD01048760;GBDF01050549;XM_005397925;XM_005397926;XM_005397928;XM_005397930;XM_013521171;XM_013521172;XM_013521173;XM_013521174;XM_013521175;XM_013521176;XM_013521177 XP_005397982;XP_005397983;XP_005397985;XP_005397987;XP_013376625;XP_013376626;XP_013376627;XP_013376628;XP_013376629;XP_013376630;XP_013376631 MODEL 8750369 protein-coding S100a11 S100 calcium binding protein A11 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); S100 protein binding (ortholog); INVOLVED IN positive regulation of smooth muscle cell migration (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955589 405544 409936 + 102010111 AGCD01076171;GBDF01162287;XM_005414534;XM_005414535;XM_013509959;XM_013509960 XP_005414591;XP_005414592;XP_013365413;XP_013365414 MODEL 9022618 protein-coding LOC102003354 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7648769 7675912 - 102003354 AGCD01062155;AGCD01062156;XM_005406061 XP_005406118 MODEL 8789268 ncrna LOC102011218 uncharacterized LOC102011218 NW_004955424 20490173 20500552 + 102011218 AGCD01024856;AGCD01024857;AGCD01024858;GBCB01025533;XR_001234179;XR_261091 MODEL 9032302 protein-coding Ccdc66 coiled-coil domain containing 66 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); cilium disassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); centriolar satellite (ortholog); centrosome (ortholog) NW_004955430 6402622 6440154 + 102009972 AGCD01029290;AGCD01029291;AGCD01029292;GBDK01232533;XM_005387392;XM_005387394;XM_005387396;XM_005387397;XM_013515615 XP_005387449;XP_005387451;XP_005387453;XP_005387454;XP_013371069 MODEL 39131669 rrna 5S_rRNA 5S ribosomal RNA 8936120 protein-coding LOC102003694 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like NW_004955538 3385693 3395187 - 102003694 AGCD01071162;GBCE01032832;XM_005410855;XM_013507906;XM_013507908;XM_013507909;XM_013507910;XR_001232100 XP_005410912;XP_013363360;XP_013363362;XP_013363363;XP_013363364 MODEL 8766898 pseudo LOC102010402 small integral membrane protein 15-like NW_004955434 9168651 9169463 + 102010402 AGCD01032291 MODEL 8747471 pseudo LOC102006216 mitochondrial calcium uniporter regulator 1 pseudogene NW_004955408 1490717 1491878 + 102006216 AGCD01007960 MODEL 39133325 snrna U4 U4 spliceosomal RNA 8985665 protein-coding Elavl1 ELAV like RNA binding protein 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); lncRNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cell population proliferation (ortholog); lncRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); degenerative disc disease (ortholog); endometriosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytoplasmic vesicle (ortholog) NW_004955563 1283424 1315283 + 102017516 AGCD01074139;AGCD01074140;GBDF01002281;GBDF01002282;XM_005413137 XP_005413194 MODEL 8982998 pseudo LOC102012478 60S ribosomal protein L39 pseudogene NW_004955442 7979367 7988554 - 102012478 AGCD01037634;AGCD01037635;XM_005391201;XM_005391202 MODEL 9002603 protein-coding Shisal2b shisa like 2B NW_004955446 4268531 4289011 - 102022341 AGCD01040034;GBDI01277575;XM_005392635 XP_005392692 MODEL 9028540 protein-coding Bax BCL2 associated X, apoptosis regulator ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); channel activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic process (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN ceramide signaling pathway; intrinsic apoptotic pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN BAK complex (ortholog); BAX complex (ortholog); Bcl-2 family protein complex (ortholog) NW_004955559 1695960 1700246 - 102027909 AGCD01073660;GBDF01213412;GBDJ01180019;XM_005412921 XP_005412978 MODEL 39133326 snrna U4 U4 spliceosomal RNA 8853230 protein-coding Lrrc45 leucine rich repeat containing 45 INVOLVED IN cilium assembly (ortholog); protein localization to centriolar satellite (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955506 1142090 1149502 - 102019515 AGCD01065247;XM_005407229;XM_013506043;XM_013506044 XP_005407286;XP_013361497;XP_013361498 MODEL 9012893 pseudo LOC102024056 crooked neck-like protein 1 NW_004955443 299763 302020 - 102024056 AGCD01038096 MODEL 8904318 protein-coding Ticrr TOPBP1 interacting checkpoint and replication regulator ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN regulation of DNA-templated DNA replication initiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 15572789 15615556 - 102027971 AGCD01017335;AGCD01017336;GBDF01278969;XM_005381551;XM_013512555;XM_013512556 XP_005381608;XP_013368009;XP_013368010 MODEL 8718814 protein-coding Eea1 early endosome antigen 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); GTP-dependent protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); endocytosis (ortholog); vesicle fusion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN axonal spine (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955405 29760332 29959553 - 102022251 AGCD01005256;AGCD01005257;AGCD01005258;AGCD01005259;AGCD01005260;AGCD01005261;AGCD01005262;AGCD01005263;GBDJ01165087;XM_013518252 XP_013373706 MODEL 8799840 pseudo LOC102007711 26S protease regulatory subunit 10B pseudogene NW_004955444 11911103 11912271 + 102007711 AGCD01039057 MODEL 8875108 protein-coding Tada2a transcriptional adaptor 2A ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); mitotic cell cycle (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN ATAC complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955451 548373 599739 - 102026378 AGCD01042940;AGCD01042941;GBDF01279468;XM_005393934;XM_005393935;XM_005393936;XM_013519173 XP_005393991;XP_005393992;XP_005393993;XP_013374627 MODEL 8773654 protein-coding Ppic peptidylprolyl isomerase C ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955521 1138779 1143345 - 102021698 AGCD01068173;AGCD01068174;GBCQ01070591;GBCQ01098286;XM_013507085 XP_013362539 MODEL 8896589 protein-coding Eva1c eva-1 homolog C ENCODES a protein that exhibits heparin binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955407 31934954 32043827 + 102016021 AGCD01007663;AGCD01007664;AGCD01007665;AGCD01007666;AGCD01007667;AGCD01007668;GBCE01085482;XM_005375667;XM_005375668;XM_005375669;XM_013504147;XM_013504151;XM_013504153 XP_005375724;XP_005375725;XP_005375726;XP_013359601;XP_013359605;XP_013359607 MODEL 8915544 protein-coding Chlsn cholesin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN negative regulation of cholesterol biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955460 8714109 8839162 - 102015813 AGCD01048531;AGCD01048532;GBDF01125762;XM_005397799;XM_013521224;XM_013521225 XP_005397856;XP_013376678;XP_013376679 MODEL 8871607 protein-coding Dennd2b DENN domain containing 2B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Bone Fractures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog); recycling endosome (ortholog) NW_004955414 24470795 24632507 - 102020794 AGCD01015547;AGCD01015548;AGCD01015549;AGCD01015550;GBBH01115663;XM_013511888;XM_013511889;XM_013511890;XM_013511891;XM_013511892;XM_013511893;XM_013511894;XM_013511895;XM_013511896;XM_013511897 XP_013367342;XP_013367343;XP_013367344;XP_013367345;XP_013367346;XP_013367347;XP_013367348;XP_013367349;XP_013367350;XP_013367351 MODEL 8754654 ncrna LOC102029765 uncharacterized LOC102029765 NW_004955425 20273279 20278876 - 102029765 AGCD01025725;GBDF01053524;XR_001234271;XR_261160;XR_261161 MODEL 8781200 ncrna LOC102005154 uncharacterized LOC102005154 NW_004955493 5108829 5118871 - 102005154 AGCD01061059;GBDF01187998;XR_264083 MODEL 10263997 ncrna LOC106148534 uncharacterized LOC106148534 NW_004955403 52128871 52130112 - 106148534 AGCD01003002;GBDF01224337;XR_001234078 MODEL 8769532 protein-coding Inpp5e inositol polyphosphate-5-phosphatase E ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); negative regulation of protein localization to cilium (ortholog); PARTICIPATES IN phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Ciliary Motility Disorders (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955513 4304483 4313087 + 102006700 AGCD01066925;GBDF01049179;XM_005408490 XP_005408547 MODEL 39133909 misc_rna 7SK 7SK RNA 8893552 pseudo LOC102006579 histone H2A type 1-H-like NW_004955483 1224848 1228126 + 102006579 AGCD01057644 MODEL 730469058 snorna SNORA48 Small nucleolar RNA SNORA48 8892238 protein-coding Dcaf8 DDB1 and CUL4 associated factor 8 INVOLVED IN myotube cell development (ortholog); single fertilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955468 11991779 12037541 - 102015828 AGCD01052140;GBDK01131808;XM_005400200;XM_005400201;XM_005400202;XM_013522419 XP_005400257;XP_005400258;XP_005400259;XP_013377873 MODEL 8998335 pseudo LOC102025851 transmembrane protein 50A pseudogene NW_004955443 5769344 5769975 + 102025851 AGCD01038243 MODEL 8771540 protein-coding Rfx3 regulatory factor X3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); cilium assembly (ortholog); cilium-dependent cell motility (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955434 7635363 7910056 - 102019728 AGCD01032243;AGCD01032244;AGCD01032245;AGCD01032246;AGCD01032247;GBDF01254252;XM_005388617;XM_013516355;XM_013516356;XM_013516357;XM_013516358;XM_013516359;XM_013516360 XP_005388674;XP_013371809;XP_013371810;XP_013371811;XP_013371812;XP_013371813;XP_013371814 MODEL 39134469 misc_rna 7SK 7SK RNA 8760379 protein-coding Cacul1 CDK2 associated cullin domain 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955431 23242959 23319440 - 102004841 AGCD01030532;AGCD01030533;AGCD01030534;GBDK01013599;XM_005387880;XM_005387881 XP_005387937;XP_005387938 MODEL 8943982 protein-coding Qpct glutaminyl-peptide cyclotransferase ENCODES a protein that exhibits glutaminyl-peptide cyclotransferase activity (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog) NW_004955441 5138477 5168056 + 102006286 AGCD01036870;AGCD01036871;GBCE01029735;XM_005390874;XM_013517539 XP_005390931;XP_013372993 MODEL 8956659 protein-coding Lrrc46 leucine rich repeat containing 46 INVOLVED IN axoneme assembly (ortholog); maintenance of cell number (ortholog); single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955451 13276878 13281868 - 102014407 AGCD01043464;GBDF01007360;XM_005394266 XP_005394323 MODEL 8983031 protein-coding Fndc9 fibronectin type III domain containing 9 NW_004955408 11540165 11544681 - 102014420 AGCD01008312;XM_005376231 XP_005376288 MODEL 8761807 protein-coding Trub1 TruB pseudouridine synthase family member 1 ENCODES a protein that exhibits pre-miRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of pre-miRNA processing (ortholog); tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955431 19840827 19877930 + 102020477 AGCD01030455;AGCD01030456;GBDF01225347;XM_005387841 XP_005387898 MODEL 8991204 ncrna LOC102021988 uncharacterized LOC102021988 NW_004955422 26750279 26754798 - 102021988 AGCD01023300;GBDF01187334;XR_001233969;XR_001233970 MODEL 9048590 protein-coding LOC102012872 olfactory receptor 1I1 NW_004955495 8171204 8172145 - 102012872 AGCD01062187;XM_005406096 XP_005406153 MODEL 39131670 rrna 5S_rRNA 5S ribosomal RNA 8834197 protein-coding Slc17a3 solute carrier family 17 member 3 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); toxin transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN transmembrane transport (ortholog); urate metabolic process (ortholog); urate transport (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); gout (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955483 1235122 1260161 + 102028541 AGCD01057644;GBCQ01036124;XM_005403337;XM_005403338 XP_005403394;XP_005403395 MODEL 9049626 protein-coding Ptger2 prostaglandin E receptor 2 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cAMP metabolic process (ortholog); ASSOCIATED WITH Abscess (ortholog); allergic asthma (ortholog); asthma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); synapse (ortholog) NW_004955409 10760801 10775197 - 102010556 AGCD01009482;AGCD01009483;GBDJ01164140;XM_005376782;XM_005376783;XM_013510326;XM_013510327 XP_005376839;XP_005376840;XP_013365780;XP_013365781 MODEL 39132621 rrna 5S_rRNA 5S ribosomal RNA 10311725 ncrna LOC106147442 uncharacterized LOC106147442 NW_004955408 14319020 14325469 - 106147442 AGCD01008392;XR_001232344;XR_001232345;XR_001232347;XR_001232348 MODEL 8844207 protein-coding Rala RAS like proto-oncogene A ENCODES a protein that exhibits ATPase binding (ortholog); Edg-2 lysophosphatidic acid receptor binding (ortholog); GDP binding (ortholog); INVOLVED IN membrane raft localization (ortholog); neural tube closure (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); genetic disease (ortholog); HIATT-NEU-COOPER NEURODEVELOPMENTAL SYNDROME (ortholog); FOUND IN cell surface (ortholog); cleavage furrow (ortholog); endocytic vesicle (ortholog) NW_004955460 3789136 3853315 - 102018164 AGCD01048422;GBDF01124362;XM_005397729;XM_005397730;XR_263026 XP_005397786;XP_005397787 MODEL 8924367 protein-coding Elavl2 ELAV like RNA binding protein 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of synapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); synapse (ortholog) NW_004955472 10550138 10710756 + 102029958 AGCD01053717;AGCD01053718;AGCD01053719;AGCD01053720;AGCD01053721;AGCD01053722;GBDF01227616;XM_005401159;XM_005401160;XM_005401161;XM_005401163;XM_013522923;XM_013522924;XM_013522925 XP_005401216;XP_005401217;XP_005401218;XP_005401220;XP_013378377;XP_013378378;XP_013378379 MODEL 8724576 protein-coding Dtx3 deltex E3 ubiquitin ligase 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 5328723 5334092 + 102006546 AGCD01047476;GBDI01009417;XM_005397398;XM_005397399 XP_005397455;XP_005397456 MODEL 9059247 pseudo LOC102009264 mitochondrial import inner membrane translocase subunit Tim9 pseudogene NW_004955412 19546401 19547571 - 102009264 AGCD01012960 MODEL 39133328 snrna U4 U4 spliceosomal RNA 8888036 protein-coding Pofut1 protein O-fucosyltransferase 1 ENCODES a protein that exhibits peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); heart development (ortholog); nervous system development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Dowling-Degos disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955422 28809901 28833186 - 102010377 AGCD01023370;AGCD01023371;GBCQ01062176;XM_005384876 XP_005384933 MODEL 9056976 protein-coding Wt1 WT1 transcription factor ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal cortex formation (ortholog); adrenal gland development (ortholog); apoptotic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955476 10464688 10504473 - 102010054 AGCD01055423;GBDJ01006823;GBDJ01006829;XM_005401901;XM_013503000;XM_013503001;XM_013503002 XP_005401958;XP_013358454;XP_013358455;XP_013358456 MODEL 8922352 protein-coding Tie1 tyrosine kinase with immunoglobulin like and EGF like domains 1 INVOLVED IN aortic valve morphogenesis (ortholog); blood vessel development (ortholog); branching involved in lymph vessel morphogenesis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955537 2894913 2914284 + 102024611 AGCD01070939;GBDK01005466;XM_005410646;XM_005410647 XP_005410703;XP_005410704 MODEL 8839556 protein-coding LOC102003701 vomeronasal type-1 receptor 1-like NW_004955558 687163 688056 + 102003701 AGCD01073385;XM_005412741 XP_005412798 MODEL 9030792 protein-coding LOC102024059 CD209 antigen-like protein E NW_004955563 1520908 1536722 + 102024059 AGCD01074151;AGCD01074152;GBDJ01280070;XM_005413157;XM_013509180;XM_013509181;XM_013509182 XP_005413214;XP_013364634;XP_013364635;XP_013364636 MODEL 8989445 protein-coding S100a13 S100 calcium binding protein A13 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); fibroblast growth factor binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955545 266674 282408 - 102016637 AGCD01071781;GBDI01022123;XM_005411432;XM_005411433;XM_005411435;XM_013508324;XM_013508325;XM_013508326;XM_013508327;XM_013508328;XM_013508329;XM_013508330;XM_013508331 XP_005411489;XP_005411490;XP_005411492;XP_013363778;XP_013363779;XP_013363780;XP_013363781;XP_013363782;XP_013363783;XP_013363784;XP_013363785 MODEL 9060791 ncrna LOC102011220 uncharacterized LOC102011220 NW_004955425 27826699 27828785 - 102011220 AGCD01025989;GBDF01079916;XR_261178 MODEL 8852633 ncrna LOC102010405 uncharacterized LOC102010405 NW_004955436 1481983 1512078 + 102010405 AGCD01033577;AGCD01033578;AGCD01033579;GBDF01153927;XR_001234957;XR_001234958;XR_001234959;XR_001234960;XR_001234961;XR_001234962;XR_001234963;XR_001234964 MODEL 8758761 ncrna LOC102005477 uncharacterized LOC102005477 NW_004955420 14717038 14721487 + 102005477 AGCD01020954;GBBH01152513;XR_260717 MODEL 8993255 pseudo LOC102006218 attractin pseudogene NW_004955458 8263305 8377868 - 102006218 AGCD01047602;AGCD01047603;AGCD01047604 MODEL 8798067 pseudo LOC102029769 receptor-binding cancer antigen expressed on SiSo cells-like NW_004955505 4408296 4411548 + 102029769 AGCD01065111 MODEL 8842591 protein-coding Chm CHM Rab escort protein ENCODES a protein that exhibits protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN blood vessel development (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Choroideremia (ortholog); FOUND IN cytosol (ortholog); Rab-protein geranylgeranyltransferase complex (ortholog) NW_004955525 359393 563930 - 102017270 AGCD01068997;AGCD01068998;AGCD01068999;AGCD01069000;AGCD01069001;GBDI01106223;XM_005409721;XR_001231961 XP_005409778 MODEL 10200905 ncrna LOC106148536 uncharacterized LOC106148536 NW_004955423 957751 961835 - 106148536 AGCD01023424;AGCD01023425;GBDJ01387636;XR_001234079;XR_001234080 MODEL 39133910 misc_rna 7SK 7SK RNA 8791886 protein-coding Arid3b AT-rich interaction domain 3B INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955450 3272820 3318820 - 102013031 AGCD01042426;AGCD01042427;GBDI01325417;XM_005393554;XM_013518993;XM_013518994 XP_005393611;XP_013374447;XP_013374448 MODEL 39132629 rrna 5S_rRNA 5S ribosomal RNA 8956923 protein-coding LOC102025853 zinc finger protein 878-like NW_004955569 119683 145674 + 102025853 AGCD01074561;AGCD01074562;AGCD01074563;GBDJ01003786;XM_005413489;XM_005413490 XP_005413546;XP_005413547 MODEL 9023727 protein-coding Dcakd dephospho-CoA kinase domain containing ENCODES a protein that exhibits dephospho-CoA kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955451 17769268 17791509 - 102022875 AGCD01043773;GBCE01055043;XM_005394560;XM_005394561;XM_005394562;XM_013519155;XM_013519156 XP_005394617;XP_005394618;XP_005394619;XP_013374609;XP_013374610 MODEL 8913814 protein-coding LOC102003358 zinc finger protein 709-like NW_004955499 342903 348346 + 102003358 AGCD01063222;GBDI01384946;XM_013505570 XP_013361024 MODEL 8780735 protein-coding LOC102007712 basic proline-rich protein-like NW_004955445 2689893 2693822 - 102007712 AGCD01039361;GBDF01211368;XM_005392263;XR_001235561;XR_262297 XP_005392320 MODEL 8983318 protein-coding Rfx4 regulatory factor X4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); cilium assembly (ortholog); dorsal spinal cord development (ortholog); FOUND IN nucleus (ortholog) NW_004955405 40483391 40648992 + 102022457 AGCD01005518;AGCD01005519;AGCD01005520;AGCD01005521;AGCD01005522;GBDF01004566;XM_005374622;XM_005374623;XM_005374624;XM_005374625 XP_005374679;XP_005374680;XP_005374681;XP_005374682 MODEL 8753840 protein-coding Cope coat protein complex I subunit epsilon INVOLVED IN protein localization to axon (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN COPI-coated vesicle (ortholog); Golgi apparatus (ortholog) NW_004955524 2767996 2779671 + 102003273 AGCD01068834;GBCE01000519;XM_005409597;XM_005409598 XP_005409654;XP_005409655 MODEL 8996544 protein-coding Tada2b transcriptional adaptor 2B PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN SAGA complex (ortholog); SAGA-type complex (ortholog) NW_004955514 3468078 3478085 - 102015558 AGCD01067096;GBBH01164639;GBDF01085926;XM_005408796 XP_005408853 MODEL 8905341 protein-coding Evc EvC ciliary complex subunit 1 INVOLVED IN cartilage development (ortholog); endochondral bone growth (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ciliary basal body (ortholog); ciliary membrane (ortholog); cilium (ortholog) NW_004955514 4279603 4330897 - 102022418 AGCD01067129;AGCD01067130;AGCD01067131;GBCQ01005915;XM_013506839;XM_013506840;XM_013506841;XR_001231780 XP_013362293;XP_013362294;XP_013362295 MODEL 8844441 protein-coding Ccdc68 coiled-coil domain containing 68 INVOLVED IN intracellular protein localization (ortholog); microtubule anchoring at centrosome (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Habitual Abortions (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog) NW_004955402 39426158 39493655 - 102027591 AGCD01000981;AGCD01000982;GBCQ01127483;XM_005372956;XM_013510881;XM_013510885;XM_013510887;XM_013510889;XM_013510892;XM_013510895;XM_013510898;XM_013510903;XM_013510910;XM_013510913;XM_013510919;XM_013510924;XM_013510934;XM_013510937;XM_013510939 XP_005373013;XP_013366335;XP_013366339;XP_013366341;XP_013366343;XP_013366346;XP_013366349;XP_013366352;XP_013366357;XP_013366364;XP_013366367;XP_013366373;XP_013366378;XP_013366388;XP_013366391;XP_013366393 MODEL 8954642 protein-coding Qpctl glutaminyl-peptide cyclotransferase like ENCODES a protein that exhibits glutaminyl-peptide cyclotransferase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN protein maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955574 165031 172713 + 102017522 AGCD01075088;GBDF01222689;XM_005413799;XM_013509513;XM_013509514 XP_005413856;XP_013364967;XP_013364968 MODEL 8708820 protein-coding LOC102025137 melanoma-associated antigen 10-like NW_004955498 4797137 4797895 + 102025137 AGCD01063020;GBDF01246816;XM_005406487 XP_005406544 MODEL 8861049 protein-coding Dennd2c DENN domain containing 2C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955435 17859521 17960008 - 102019101 AGCD01033375;AGCD01033376;AGCD01033377;AGCD01033378;AGCD01033379;GBCE01080878;XM_005389001;XM_005389002;XM_013516546 XP_005389058;XP_005389059;XP_013372000 MODEL 8965590 protein-coding Fnip1 folliculin interacting protein 1 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to starvation (ortholog); immature B cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog) NW_004955408 3117258 3238223 - 102023333 AGCD01008047;AGCD01008048;AGCD01008049;AGCD01008050;GBCE01105034;XM_005376081;XM_005376082 XP_005376138;XP_005376139 MODEL 8798418 protein-coding Inpp5f inositol polyphosphate-5-phosphatase F ENCODES a protein that exhibits inositol monophosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); familial hypercholesterolemia (ortholog); melanoma (ortholog); FOUND IN axon (ortholog); clathrin-coated endocytic vesicle (ortholog); clathrin-coated pit (ortholog) NW_004955551 634724 641266 + 102012133 AGCD01072666;GBCQ01070019;XM_005412166 XP_005412223 MODEL 8804190 pseudo LOC102012875 uncharacterized LOC102012875 NW_004955497 3366221 3391937 + 102012875 AGCD01062536;AGCD01062537;AGCD01062538;AGCD01062539 MODEL 8704359 protein-coding LOC102012479 uncharacterized LOC102012479 NW_004955559 461354 469388 - 102012479 AGCD01073586;GBDK01094411;XM_013508927;XM_013508928;XM_013508929;XM_013508930;XM_013508931;XM_013508932;XM_013508933;XM_013508934 XP_013364381;XP_013364382;XP_013364383;XP_013364384;XP_013364385;XP_013364386;XP_013364387;XP_013364388 MODEL 9065593 pseudo LOC102006580 olfactory receptor 13C4-like NW_004955419 21896616 21897652 + 102006580 AGCD01020289 MODEL 730469305 snorna SNORA48 Small nucleolar RNA SNORA48 8750247 protein-coding Ctnnb1 catenin beta 1 ENCODES a protein that exhibits alpha-catenin binding (ortholog); cadherin binding (ortholog); chromatin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); adherens junction organization (ortholog); angiogenesis (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; E-cadherin signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); adamantinous craniopharyngioma (ortholog); adenocarcinoma (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apical junction complex (ortholog) NW_004955420 29030716 29047447 - 102007777 AGCD01021492;GBCB01005191;GBCE01051940;XM_005383567 XP_005383624 MODEL 9065582 ncrna LOC102006219 uncharacterized LOC102006219 NW_004955409 9811332 9815400 - 102006219 AGCD01009449;GBDF01214479;XR_259763 MODEL 8891437 protein-coding Shkbp1 SH3KBP1 binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN lysosome (ortholog) NW_004955578 716818 730593 - 102011711 AGCD01075493;GBDK01090513;XM_005414043 XP_005414100 MODEL 10357212 ncrna LOC106148537 uncharacterized LOC106148537 NW_004955423 789806 796651 - 106148537 AGCD01023420;GBCQ01161640;XR_001234083 MODEL 10256815 ncrna LOC106147443 uncharacterized LOC106147443 NW_004955408 14496344 14524772 + 106147443 AGCD01008399;XR_001232349 MODEL 8832960 protein-coding Eed embryonic ectoderm development ENCODES a protein that exhibits chromatin binding (ortholog); enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); facultative heterochromatin formation (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN chromatin silencing complex (ortholog); ESC/E(Z) complex (ortholog); nucleoplasm (ortholog) NW_004955414 6659144 6685530 - 102011107 AGCD01014926;GBBH01214076;XM_005379744;XM_013511798 XP_005379801;XP_013367252 MODEL 9046681 ncrna LOC102009265 uncharacterized LOC102009265 NW_004955412 20503994 20512991 + 102009265 AGCD01013010;GBDF01155155;XR_260005 MODEL 8781077 protein-coding Elavl3 ELAV like RNA binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); polycystic ovary syndrome (ortholog) NW_004955495 2338939 2360843 - 102025374 AGCD01061767;AGCD01061768;GBDF01254190;XM_005405670;XM_005405671 XP_005405727;XP_005405728 MODEL 8906405 protein-coding Dtx3l deltex E3 ubiquitin ligase 3L ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); histone binding (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955427 21806170 21812701 + 102011223 AGCD01027459;GBCE01170484;XM_005386514 XP_005386571 MODEL 8999362 ncrna LOC102005155 uncharacterized LOC102005155 NW_004955494 4421919 4432652 + 102005155 AGCD01061498;GBDF01157914;XR_001231313;XR_264112;XR_264113 MODEL 8753141 protein-coding Lrrc47 leucine rich repeat containing 47 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955486 7880259 7890709 + 102023479 AGCD01059139;GBDI01127111;XM_005404136;XM_005404137 XP_005404193;XP_005404194 MODEL 8908789 ncrna LOC102003703 uncharacterized LOC102003703 NW_004955444 18667764 18677902 + 102003703 AGCD01039249;GBBH01195406;XR_001235492 MODEL 8723609 protein-coding LOC102021990 olfactory receptor 18-like NW_004955495 512537 513481 - 102021990 AGCD01061633;XM_013505092 XP_013360546 MODEL 8934635 pseudo LOC102011221 DNA-directed RNA polymerase II subunit RPB3 pseudogene NW_004955426 24102744 24103895 + 102011221 AGCD01026668 MODEL 8932661 protein-coding LOC102005483 olfactory receptor 4B1-like NW_004955422 365286 366218 - 102005483 AGCD01022404;XM_005384937 XP_005384994 MODEL 8768717 protein-coding Trub2 TruB pseudouridine synthase family member 2 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); tRNA pseudouridine(55) synthase activity (ortholog); INVOLVED IN mitochondrial tRNA pseudouridine synthesis (ortholog); mRNA pseudouridine synthesis (ortholog); positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); ribonucleoprotein granule (ortholog) NW_004955570 826776 837116 - 102024393 AGCD01074769;GBDI01220800;XM_005413537 XP_005413594 MODEL 8988873 ncrna LOC102029772 uncharacterized LOC102029772 NW_004955510 1224469 1317910 + 102029772 AGCD01066189;AGCD01066190;AGCD01066191;AGCD01066192;GBDF01127039;XR_264402 MODEL 8866887 protein-coding Slc17a4 solute carrier family 17 member 4 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); thyroid hormone transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN sodium-dependent phosphate transport (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955483 1307081 1345962 - 102029969 AGCD01057645;GBCQ01012294;XM_005403342;XM_013503755 XP_005403399;XP_013359209 MODEL 39134470 misc_rna 7SK 7SK RNA 8782984 ncrna LOC102018646 uncharacterized LOC102018646 NW_004955538 2638259 2653814 + 102018646 AGCD01071133;AGCD01071134;GBDK01170259;XR_001232095 MODEL 8783522 protein-coding Baz1a bromodomain adjacent to zinc finger domain 1A INVOLVED IN chromatin remodeling (ortholog); DNA-templated DNA replication (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ACF complex (ortholog); CHRAC (ortholog); nuclear chromosome (ortholog) NW_004955409 26136961 26231960 + 102010779 AGCD01010158;AGCD01010159;AGCD01010160;AGCD01010161;AGCD01010162;AGCD01010163;AGCD01010164;GBBH01102027;GBDI01259061;XM_013510376 XP_013365830 MODEL 39133911 misc_rna 7SK 7SK RNA 39133329 snrna U4 U4 spliceosomal RNA 39132630 rrna 5S_rRNA 5S ribosomal RNA 730469195 misc_rna WT1-AS_3 WT1 antisense RNA conserved region 3 8797119 protein-coding Cacybp calcyclin binding protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to calcium ion (ortholog); cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955406 14823509 14840127 + 102021845 AGCD01005971;AGCD01005972;AGCD01005973;AGCD01005974;GBCB01002196;XM_005375460 XP_005375517 MODEL 8961535 protein-coding Dcbld1 discoidin, CUB and LCCL domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog) NW_004955436 688546 726952 + 102022424 AGCD01033554;AGCD01033555;AGCD01033556;GBBH01077171;GBDF01158986;XM_013516615 XP_013372069 MODEL 8874515 pseudo LOC102010411 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955545 1844626 1846296 - 102010411 AGCD01071873 MODEL 8743113 protein-coding Tifa TRAF interacting protein with forkhead associated domain INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); innate immune response (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); ubiquitin ligase complex (ortholog) NW_004955457 14444811 14460168 + 102020529 AGCD01047073;GBDF01293417;XM_005397102;XM_005397103;XR_262952;XR_262953 XP_005397159;XP_005397160 MODEL 9029961 protein-coding S100a14 S100 calcium binding protein A14 ENCODES a protein that exhibits chemokine receptor binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); positive regulation of granulocyte chemotaxis (ortholog); positive regulation of monocyte chemotaxis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955545 261483 263689 - 102014174 AGCD01071781;GBDJ01073258;XM_005411418 XP_005411475 MODEL 8787079 pseudo LOC102009267 60S ribosomal protein L7a pseudogene NW_004955467 9883721 9884522 + 102009267 AGCD01051535 MODEL 39131671 rrna 5S_rRNA 5S ribosomal RNA 39131383 protein-coding PTGER3 prostaglandin E receptor 3 8949791 protein-coding Elavl4 ELAV like RNA binding protein 4 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); associative learning (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH High Myopia (ortholog); hypothyroidism (ortholog); learning disability (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955464 8699142 8847289 - 102028278 AGCD01050095;AGCD01050096;AGCD01050097;GBDF01146229;XM_005398613;XM_005398615;XM_005398616;XM_005398617;XM_005398618;XM_005398619;XM_005398622 XP_005398670;XP_005398672;XP_005398673;XP_005398674;XP_005398675;XP_005398676;XP_005398679 MODEL 10392019 protein-coding Chml CHM like Rab escort protein ENCODES a protein that exhibits small GTPase binding (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); Rab-protein geranylgeranyltransferase complex (ortholog) NW_004955406 10455367 10461934 + 106146235 AGCD01005861;GBDF01223071;XM_013520518 XP_013375972 MODEL 9067068 protein-coding Ppid peptidylprolyl isomerase D ENCODES a protein that exhibits cyclosporin A binding (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular response to UV-A (ortholog); lipid droplet organization (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955471 12309224 12323198 - 102018917 AGCD01053285;AGCD01053286;GBDI01137437;XM_005400965 XP_005401022 MODEL 39131598 snorna SNORD42 Small nucleolar RNA SNORD42 8719559 pseudo LOC102025857 tyrosine-protein phosphatase non-receptor type 9 pseudogene NW_004955578 378235 383809 + 102025857 AGCD01075479 MODEL 8930452 pseudo LOC102003359 transmembrane protein 254 pseudogene NW_004955424 24750779 24751166 - 102003359 AGCD01025032 MODEL 8863679 ncrna LOC102029776 uncharacterized LOC102029776 NW_004955431 22065599 22087630 + 102029776 AGCD01030509;AGCD01030510;GBDF01192236;XR_001234582;XR_261492 MODEL 8921322 protein-coding Pofut2 protein O-fucosyltransferase 2 ENCODES a protein that exhibits fucosyltransferase activity (ortholog); peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN mesoderm formation (ortholog); positive regulation of protein folding (ortholog); protein O-linked glycosylation via fucose (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955407 41972833 41984095 - 102012501 AGCD01007884;GBCQ01098842;XM_005375911 XP_005375968 MODEL 10182861 ncrna LOC106148538 uncharacterized LOC106148538 NW_004955423 796680 816937 - 106148538 AGCD01023420;AGCD01023421;GBCB01095417;XR_001234084 MODEL 8905416 protein-coding LOC102024063 neutrophil gelatinase-associated lipocalin-like NW_004955570 492312 495847 + 102024063 AGCD01074730;XM_005413637 XP_005413694 MODEL 10182838 ncrna LOC106147444 uncharacterized LOC106147444 NW_004955408 14328702 14354971 - 106147444 AGCD01008393;XR_001232351;XR_001232352 MODEL 8740288 protein-coding Rfx5 regulatory factor X5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of MHC class II biosynthetic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955588 687086 695696 - 102004022 AGCD01076118;GBCQ01031430;XM_005414519;XM_005414520;XM_005414522;XM_005414523;XM_013509923;XM_013509924;XM_013509925 XP_005414576;XP_005414577;XP_005414579;XP_005414580;XP_013365377;XP_013365378;XP_013365379 MODEL 8717900 protein-coding Ccdc69 coiled-coil domain containing 69 INVOLVED IN spindle midzone assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN midbody (ortholog); spindle midzone (ortholog) NW_004955408 2471157 2498611 + 102016979 AGCD01008007;GBCB01038685;XM_005376057 XP_005376114 MODEL 8780315 protein-coding Evc2 EvC ciliary complex subunit 2 INVOLVED IN smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); nucleus (ortholog) NW_004955514 4332624 4430844 + 102023182 AGCD01067131;AGCD01067132;AGCD01067133;GBDK01357154;XM_005408823;XM_005408825;XM_005408826;XM_005408827;XM_013506842;XM_013506843;XM_013506844 XP_005408880;XP_005408882;XP_005408883;XP_005408884;XP_013362296;XP_013362297;XP_013362298 MODEL 9006315 pseudo LOC102012878 mitochondrial import inner membrane translocase subunit TIM14 pseudogene NW_004955426 25828943 25829298 - 102012878 AGCD01026728 MODEL 9062543 pseudo LOC102021993 60S ribosomal protein L39 pseudogene NW_004955426 23811335 23811493 - 102021993 AGCD01026658;XM_005386237 MODEL 8918957 pseudo LOC102012481 uncharacterized LOC102012481 NW_004955446 7640915 7696303 + 102012481 AGCD01040126;AGCD01040127;AGCD01040128 MODEL 8700974 pseudo LOC102005496 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955433 1844022 1845319 - 102005496 AGCD01031371 MODEL 10205578 ncrna LOC106147445 uncharacterized LOC106147445 NW_004955559 2113545 2115031 - 106147445 AGCD01073691;GBDI01355253;XR_001232350 MODEL 730469466 snorna SNORA48 Small nucleolar RNA SNORA48 8923305 protein-coding Lrrc49 leucine rich repeat containing 49 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); microtubule (ortholog) NW_004955450 5903345 6030279 - 102009445 AGCD01042514;AGCD01042515;AGCD01042516;AGCD01042517;AGCD01042518;GBDF01051822;XM_005393636;XM_005393637;XM_005393639 XP_005393693;XP_005393694;XP_005393696 MODEL 8848716 protein-coding LOC102006582 serine protease 44-like NW_004955420 25378681 25382275 + 102006582 AGCD01021355;GBDF01077365;XM_013513624 XP_013369078 MODEL 8739789 protein-coding Dennd2d DENN domain containing 2D ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955435 14744226 14764034 - 102025162 AGCD01033249;GBBH01165854;XM_005388943;XM_013516455;XM_013516456;XM_013516457;XM_013516458 XP_005389000;XP_013371909;XP_013371910;XP_013371911;XP_013371912 MODEL 8907591 pseudo LOC102006221 evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial pseudogene NW_004955409 19008763 19009507 - 102006221 AGCD01009854 MODEL 39131389 protein-coding CTNNBIP1 catenin beta interacting protein 1 9004768 protein-coding Arid3c AT-rich interaction domain 3C ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN macrophage differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); nucleus (ortholog) NW_004955472 1503448 1510965 + 102013927 AGCD01053396;AGCD01053397;GBCE01026351;XM_005401184 XP_005401241 MODEL 39134471 misc_rna 7SK 7SK RNA 8904022 protein-coding Shld1 shieldin complex subunit 1 INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); site of double-strand break (ortholog) NW_004955415 16180074 16282937 + 102013928 AGCD01016375;AGCD01016376;GBDJ01222624;XM_005380839;XM_005380840;XM_005380841;XM_005380842 XP_005380896;XP_005380897;XP_005380898;XP_005380899 MODEL 8930280 protein-coding Slc17a5 solute carrier family 17 member 5 ENCODES a protein that exhibits D-glucuronate transmembrane transporter activity (ortholog); sialic acid transmembrane transporter activity (ortholog); sialic acid:proton symporter activity (ortholog); INVOLVED IN neurotransmitter loading into synaptic vesicle (ortholog); response to bacterium (ortholog); sialic acid transport (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); Anisocoria (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) NW_004955493 8693933 8719250 - 102023049 AGCD01061332;AGCD01061333;AGCD01061334;AGCD01061335;AGCD01061336;GBDJ01130112;GBDK01135048;XM_013504876 XP_013360330 MODEL 8914672 protein-coding LOC102007716 zinc finger protein 416 NW_004955584 345732 357089 - 102007716 AGCD01075940;GBDF01260674;XM_013509856;XR_001232513;XR_001232514 XP_013365310 MODEL 8976836 protein-coding Tada3 transcriptional adaptor 3 ENCODES a protein that exhibits nuclear receptor binding (ortholog); protein domain specific binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN chromatin organization (ortholog); mitotic cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN ATAC complex (ortholog); mitotic spindle (ortholog); nucleoplasm (ortholog) NW_004955561 1304222 1314092 - 102008779 AGCD01073848;GBCQ01040112;XM_005413033 XP_005413090 MODEL 9003821 protein-coding Eef1a1 eukaryotic translation elongation factor 1 alpha 1 ENCODES a protein that exhibits calmodulin binding (ortholog); GTPase activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; translation elongation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Burns (ortholog); carcinoma (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955493 8661317 8663190 - 102009516 AGCD01061325;GBBH01000801;GBCE01002384;XM_005405329 XP_005405386 MODEL 8960538 protein-coding Dtx4 deltex E3 ubiquitin ligase 4 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of innate immune response (ortholog); proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955511 3758631 3782560 + 102009204 AGCD01066476;GBDJ01419868;GBDJ01419870;XM_005408058 XP_005408115 MODEL 9010649 pseudo LOC102025138 ribosome-recycling factor, mitochondrial pseudogene NW_004955424 15678952 15680946 - 102025138 AGCD01024722 MODEL 39131672 rrna 5S_rRNA 5S ribosomal RNA 8906494 protein-coding Ralb RAS like proto-oncogene B ENCODES a protein that exhibits ATPase binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN positive regulation of autophagosome assembly (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); positive regulation of innate immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN midbody (ortholog); plasma membrane (ortholog) NW_004955459 9533081 9574464 - 102016136 AGCD01048159;AGCD01048160;AGCD01048161;GBDI01080246;XM_005397650;XM_005397651 XP_005397707;XP_005397708 MODEL 8894819 protein-coding Fnip2 folliculin interacting protein 2 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955471 12329686 12444782 + 102019265 AGCD01053286;AGCD01053287;AGCD01053288;AGCD01053289;AGCD01053290;AGCD01053291;AGCD01053292;GBDF01304363;XM_005400966;XM_005400967;XM_013522873;XM_013522874;XM_013522875;XM_013522876;XM_013522877;XM_013522878;XM_013522879 XP_005401023;XP_005401024;XP_013378327;XP_013378328;XP_013378329;XP_013378330;XP_013378331;XP_013378332;XP_013378333 MODEL 8876213 protein-coding Inpp5j inositol polyphosphate-5-phosphatase J ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); dendritic shaft (ortholog); growth cone (ortholog) NW_004955455 5304346 5314432 + 102005008 AGCD01045720;GBDF01023354;XM_013520477;XM_013520478 XP_013375931;XP_013375932 MODEL 730469393 misc_rna Evf-2_5p Embryonic ventral forebrain-2 long ncRNA 8858319 protein-coding Tigar TP53 induced glycolysis regulatory phosphatase ENCODES a protein that exhibits fructose-2,6-bisphosphate 2-phosphatase activity (ortholog); INVOLVED IN cellular response to cobalt ion (ortholog); cellular response to hypoxia (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Nerve Degeneration (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955413 2129719 2153873 + 102029277 AGCD01013540;AGCD01013541;GBDF01122114;XM_005378727;XM_005378728 XP_005378784;XP_005378785 MODEL 8924044 protein-coding Dcbld2 discoidin, CUB and LCCL domain containing 2 INVOLVED IN negative regulation of cell growth (ortholog); wound healing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955427 453820 536720 - 102016729 AGCD01026834;AGCD01026835;AGCD01026836;AGCD01026837;GBCB01098564;XM_013515115;XM_013515116;XM_013515117;XM_013515118;XM_013515119 XP_013370569;XP_013370570;XP_013370571;XP_013370572;XP_013370573 MODEL 8759788 protein-coding S100a16 S100 calcium binding protein A16 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN response to calcium ion (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955545 254370 260471 - 102013649 AGCD01071781;GBCE01004299;XM_005411416;XM_005411417 XP_005411473;XP_005411474 MODEL 39133912 misc_rna 7SK 7SK RNA 8787674 protein-coding LOC102006584 kita-kyushu lung cancer antigen 1 homolog NW_004955490 5015885 5017132 - 102006584 AGCD01060199;GBDF01123449;XM_005404649 XP_005404706 MODEL 10334409 ncrna LOC106147446 uncharacterized LOC106147446 NW_004955560 354475 357738 + 106147446 AGCD01073721;GBDF01286169;XR_001232353 MODEL 39133331 snrna U4 U4 spliceosomal RNA 39132637 rrna 5S_rRNA 5S ribosomal RNA 8868888 protein-coding Baz1b bromodomain adjacent to zinc finger domain 1B ENCODES a protein that exhibits histone binding (ortholog); histone H2AXY142 kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN chromatin organization (ortholog); chromatin remodeling (ortholog); DNA damage response (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN B-WICH complex (ortholog); condensed chromosome (ortholog); nuclear replication fork (ortholog) NW_004955456 14185091 14242391 + 102013587 AGCD01046636;AGCD01046637;GBDF01045151;GBDJ01091843;XM_013520577 XP_013376031 MODEL 8752182 protein-coding LOC102005156 olfactory receptor 4X2-like NW_004955422 356829 357764 + 102005156 AGCD01022404;XM_005384936 XP_005384993 MODEL 8853448 protein-coding Qprt quinolinate phosphoribosyltransferase ENCODES a protein that exhibits identical protein binding (ortholog); nicotinate-nucleotide diphosphorylase (carboxylating) activity (ortholog); INVOLVED IN 'de novo' NAD+ biosynthetic process from L-tryptophan (ortholog); NAD+ biosynthetic process (ortholog); quinolinate catabolic process (ortholog); PARTICIPATES IN de novo nicotinamide adenine dinucleotide biosynthetic pathway; niacin metabolic pathway; ASSOCIATED WITH Huntington's disease (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN catalytic complex (ortholog); cytosol (ortholog) NW_004955493 7225472 7243078 - 102011554 AGCD01061168;AGCD01061169;AGCD01061170;GBCQ01003527;XM_005405247 XP_005405304 MODEL 8982804 protein-coding Ppie peptidylprolyl isomerase E ENCODES a protein that exhibits mRNA binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); poly(A) binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of viral genome replication (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 17242255 17256776 + 102028929 AGCD01044545;AGCD01044546;GBBH01228246;GBDJ01225065;XM_013519652 XP_013375106 MODEL 8839916 protein-coding LOC102011222 translation initiation factor IF-2-like NW_004955504 1462038 1467322 + 102011222 AGCD01064839;AGCD01064840;GBDI01357943;GBDK01076347;XM_013505915 XP_013361369 MODEL 8934261 protein-coding Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ENCODES a protein that exhibits aspartate carbamoyltransferase activity (ortholog); carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (ortholog); dihydroorotase activity (ortholog); INVOLVED IN 'de novo' CTP biosynthetic process (ortholog); 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); 'de novo' UMP biosynthetic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; beta-ureidopropionase deficiency pathway; Canavan disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell projection (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955469 9203433 9227526 + 102023574 AGCD01052496;AGCD01052497;GBBH01101491;XM_005400467;XM_005400468;XM_005400469;XM_005400470;XM_013522640 XP_005400524;XP_005400525;XP_005400526;XP_005400527;XP_013378094 MODEL 9010183 protein-coding LOC102003706 WAP four-disulfide core domain protein 6A-like NW_004955445 11697127 11701399 + 102003706 AGCD01039713;GBDF01265082;XM_005392421 XP_005392478 MODEL 8736240 protein-coding Ccdc70 coiled-coil domain containing 70 FOUND IN plasma membrane (ortholog) NW_004955431 5166451 5170263 + 102005287 AGCD01030016;GBDF01001040;XM_005387609;XM_005387610 XP_005387666;XP_005387667 MODEL 8791327 protein-coding LOC102018647 uncharacterized LOC102018647 NW_004955538 3457041 3463322 - 102018647 AGCD01071164;GBDI01201463;XM_013507825 XP_013363279 MODEL 730469092 snorna SNORD44 Small nucleolar RNA SNORD44 39131407 protein-coding CHML CHM like Rab escort protein 41410896 snorna SNORA49 Small nucleolar RNA SNORA49 8957090 ncrna LOC102005498 uncharacterized LOC102005498 NW_004955522 4121118 4127681 - 102005498 AGCD01068413;GBDF01226154;XR_001231895;XR_264630 MODEL 8984627 protein-coding Copg1 coat protein complex I subunit gamma 1 INVOLVED IN establishment of Golgi localization (ortholog); organelle transport along microtubule (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955429 13582676 13615801 + 102011890 AGCD01028755;AGCD01028756;AGCD01028757;GBDF01050042;XM_005386999 XP_005387056 MODEL 9027619 protein-coding LOC102003362 60S ribosomal protein L29-like NW_004955505 6929524 6988367 + 102003362 AGCD01065190;AGCD01065191;AGCD01065192;AGCD01065193;XM_005407177 XP_005407234 MODEL 8964199 protein-coding Ctnnbl1 catenin beta like 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); somatic diversification of immunoglobulins (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); Prp19 complex (ortholog) NW_004955445 18809389 18975858 - 102016960 AGCD01039906;AGCD01039907;AGCD01039908;GBBH01188717;XM_005392553;XM_005392554 XP_005392610;XP_005392611 MODEL 8904498 ncrna LOC102006222 uncharacterized LOC102006222 NW_004955461 4118997 4141681 + 102006222 AGCD01048858;AGCD01048859;AGCD01048860;XR_263079 MODEL 10061152 ncrna LOC106148539 uncharacterized LOC106148539 NW_004955423 782921 784170 - 106148539 AGCD01023420;XR_001234086 MODEL 39132149 snorna SNORD45 Small nucleolar RNA SNORD45 8725998 ncrna LOC102006589 uncharacterized LOC102006589 NW_004955495 6548347 6552199 + 102006589 AGCD01062085;GBDF01303427;XR_264164 MODEL 8745488 protein-coding Rfx6 regulatory factor X6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN endocrine pancreas development (ortholog); glucose homeostasis (ortholog); pancreatic A cell differentiation (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); epilepsy (ortholog); familial hyperlipidemia (ortholog); FOUND IN nucleus (ortholog) NW_004955436 213810 278699 + 102007270 AGCD01033537;AGCD01033538;AGCD01033539;GBDF01078446;XM_005389119 XP_005389176 MODEL 8764911 protein-coding LOC102007719 RNA polymerase II elongation factor ELL2-like NW_004955595 658812 660714 - 102007719 AGCD01076475;GBDF01287937;XM_005414679 XP_005414736 MODEL 8701675 protein-coding Eef1a2 eukaryotic translation elongation factor 1 alpha 2 ENCODES a protein that exhibits protein kinase binding (ortholog); translation elongation factor activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); regulation of postsynaptic specialization assembly (ortholog); response to electrical stimulus (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Alzheimer's disease (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); eukaryotic translation elongation factor 1 complex (ortholog) NW_004955528 717338 726383 + 102010729 AGCD01069544;AGCD01069545;GBCB01005764;GBDF01110613;XM_005409964 XP_005410021 MODEL 8885525 protein-coding LOC102009273 tripartite motif-containing protein 34 NW_004955414 21592178 21600802 + 102009273 AGCD01015423;AGCD01015424;GBDI01215595;XM_005380097;XM_005380098;XM_013512000;XM_013512001 XP_005380154;XP_005380155;XP_013367454;XP_013367455 MODEL 8846316 protein-coding Dtymk deoxythymidylate kinase ENCODES a protein that exhibits ATP binding (ortholog); dTMP kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); dTDP biosynthetic process (ortholog); dTTP biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Neoplasms (ortholog); NEURODEGENERATION, CHILDHOOD-ONSET, WITH PROGRESSIVE MICROCEPHALY (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955542 155741 163759 + 102006392 AGCD01071460;AGCD01071461;GBCE01076903;XM_005411121;XM_005411122 XP_005411178;XP_005411179 MODEL 8876553 ncrna LOC102012879 uncharacterized LOC102012879 NW_004955504 2373902 2394467 + 102012879 AGCD01064857;AGCD01064858;GBCB01109961;XR_001231540;XR_264288 MODEL 8833200 protein-coding Inpp5k inositol polyphosphate-5-phosphatase K ENCODES a protein that exhibits inositol bisphosphate phosphatase activity (ortholog); inositol trisphosphate phosphatase activity (ortholog); inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cataract (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955481 1651422 1674402 + 102020444 AGCD01056840;AGCD01056841;GBDF01007950;XM_013503399;XM_013503400 XP_013358853;XP_013358854 MODEL 8834168 protein-coding LOC102025859 uncharacterized LOC102025859 NW_004955584 509190 561048 - 102025859 AGCD01075944;AGCD01075945;AGCD01075946;AGCD01075947;AGCD01075948;XM_013509845 XP_013365299 MODEL 730469308 misc_rna WT1-AS_7 WT1 antisense RNA conserved region 7 9031359 protein-coding Dennd3 DENN domain containing 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955454 185299 253935 + 102020306 AGCD01044945;AGCD01044946;AGCD01044947;AGCD01044948;AGCD01044949;GBDJ01317334;GBDK01081145;XM_013520212 XP_013375666 MODEL 8961201 protein-coding Slc17a6 solute carrier family 17 member 6 ENCODES a protein that exhibits chloride channel activity (ortholog); L-glutamate uniporter activity (ortholog); potassium:proton antiporter activity (ortholog); INVOLVED IN hippocampus development (ortholog); hyaloid vascular plexus regression (ortholog); L-glutamate import (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); learning disability (ortholog); Memory Disorders (ortholog); FOUND IN early endosome (ortholog); excitatory synapse (ortholog); neuron projection (ortholog) NW_004955476 2813368 2854371 + 102009833 AGCD01055235;XM_005401732 XP_005401789 MODEL 8917079 protein-coding LOC102024075 protein mago nashi homolog NW_004955403 475609 476239 - 102024075 AGCD01001693;XM_005373213 XP_005373270 MODEL 8913164 protein-coding Arid4a AT-rich interaction domain 4A ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN chromatin organization (ortholog); erythrocyte development (ortholog); establishment of Sertoli cell barrier (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription repressor complex (ortholog) NW_004955466 12017588 12087667 + 102003106 AGCD01051107;AGCD01051108;GBDF01051037;XM_005399212;XM_005399213 XP_005399269;XP_005399270 MODEL 9030494 protein-coding S100a3 S100 calcium binding protein A3 ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955545 195834 205442 - 102012686 AGCD01071776;GBDJ01404708;XM_005411412;XM_005411413;XM_013508202;XM_013508203;XM_013508204 XP_005411469;XP_005411470;XP_013363656;XP_013363657;XP_013363658 MODEL 8721089 ncrna LOC102010412 uncharacterized LOC102010412 NW_004955545 2843891 2852564 - 102010412 AGCD01071925;GBDI01188014;XR_264882 MODEL 39133913 misc_rna 7SK 7SK RNA 8743696 protein-coding Lrrc4b leucine rich repeat containing 4B ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN positive regulation of synapse assembly (ortholog); regulation of postsynaptic density assembly (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cerebellar mossy fiber (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955559 621458 651007 + 102016527 AGCD01073602;AGCD01073603;AGCD01073604;AGCD01073605;AGCD01073606;GBDF01015462;XM_013509059 XP_013364513 MODEL 9023434 protein-coding Tsbp1 testis expressed basic protein 1 NW_004955437 830178 915199 - 102007696 AGCD01034169;AGCD01034170;AGCD01034171;AGCD01034172;AGCD01034173;AGCD01034174;GBDF01082664;XM_013516714;XM_013516715;XM_013516716;XM_013516717 XP_013372168;XP_013372169;XP_013372170;XP_013372171 MODEL 8755411 protein-coding Ptger3 prostaglandin E receptor 3 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bicarbonate transport (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH allergic asthma (ortholog); aspirin-induced respiratory disease (ortholog); asthma (ortholog); FOUND IN brush border membrane (ortholog); cell surface (ortholog); neuronal cell body (ortholog) NW_004955423 21096926 21164435 + 102004944 AGCD01023935;GBDF01208544;XM_005385244 XP_005385301 MODEL 8943506 protein-coding LOC102025141 taste receptor type 2 member 1-like NW_004955504 6888806 6889702 - 102025141 AGCD01064930;XM_005407092 XP_005407149 MODEL 8892929 ncrna LOC102006226 uncharacterized LOC102006226 NW_004955412 3986877 4028160 - 102006226 AGCD01012589;AGCD01012590;GBDF01111005;XR_259969 MODEL 8859682 ncrna LOC102021998 uncharacterized LOC102021998 NW_004955429 22441592 22449273 - 102021998 AGCD01029027;GBCQ01181689;XR_261383;XR_261384 MODEL 8981513 protein-coding LOC102003707 vomeronasal type-1 receptor 2-like NW_004955569 1079109 1080002 - 102003707 AGCD01074636;XM_013509364 XP_013364818 MODEL 8845759 protein-coding LOC102012483 olfactory receptor 2B2-like NW_004955576 1406995 1407939 + 102012483 AGCD01075375;XM_005413956 XP_005414013 MODEL 39131673 rrna 5S_rRNA 5S ribosomal RNA 8859347 protein-coding Baz2a bromodomain adjacent to zinc finger domain 2A ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin silencing complex (ortholog); NoRC complex (ortholog); nuclear speck (ortholog) NW_004955458 4149610 4186647 - 102011959 AGCD01047379;AGCD01047380;AGCD01047381;GBCE01024577;XM_005397321;XM_005397322;XM_005397324;XM_013520867;XM_013520868 XP_005397378;XP_005397379;XP_005397381;XP_013376321;XP_013376322 MODEL 8833897 protein-coding Fnta farnesyltransferase, CAAX box, subunit alpha ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); alpha-tubulin binding (ortholog); CAAX-protein geranylgeranyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog); microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) NW_004955457 13260825 13294025 + 102014014 AGCD01047040;GBDF01047752;XM_005397076 XP_005397133 MODEL 9053981 pseudo LOC102029779 ras GTPase-activating protein-binding protein 1-like NW_004955517 2707009 2708851 - 102029779 AGCD01067637 MODEL 9015525 protein-coding Tigd2 tigger transposable element derived 2 NW_004955405 80872 84184 + 102004447 AGCD01004553;GBDI01262079;XM_013517268 XP_013372722 MODEL 8834417 protein-coding Pofut3 protein O-fucosyltransferase 3 ENCODES a protein that exhibits alpha-(1->3)-fucosyltransferase activity (ortholog); fucosyltransferase activity (ortholog); peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN cerebral cortex radially oriented cell migration (ortholog); Lewis x epitope biosynthetic process (ortholog); N-glycan processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955463 9552387 9629029 - 102007203 AGCD01049788;AGCD01049789;AGCD01049790;AGCD01049791;AGCD01049792;AGCD01049793;AGCD01049794;GBCB01077274;GBCB01077275;XM_013521503;XR_001236637;XR_001236638 XP_013376957 MODEL 8792308 pseudo LOC102005500 sorting nexin-2 pseudogene NW_004955434 22965591 22967140 - 102005500 AGCD01032690 MODEL 39132836 snorna SNORA5 Small nucleolar RNA SNORA5 39132643 rrna 5S_rRNA 5S ribosomal RNA 8934707 protein-coding Shld2 shieldin complex subunit 2 INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955510 6021477 6114745 + 102013637 AGCD01066299;AGCD01066300;AGCD01066301;GBDF01147026;XM_005407911;XM_005407912;XM_005407913;XM_013506312;XR_001231666 XP_005407968;XP_005407969;XP_005407970;XP_013361766 MODEL 39133333 snrna U4 U4 spliceosomal RNA 9066516 protein-coding Chmp1a charged multivesicular body protein 1A ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cell division (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); condensed nuclear chromosome (ortholog) NW_004955541 3216972 3223636 - 102013007 AGCD01071440;GBDI01072457;XM_005411048;XM_005411049 XP_005411105;XP_005411106 MODEL 8902331 protein-coding Elf1 E74 like ETS transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955404 50952907 51020229 - 102011078 AGCD01004541;AGCD01004542;GBDK01235415;XM_005374217;XM_013516770 XP_005374274;XP_013372224 MODEL 8809451 protein-coding Ctnnd1 catenin delta 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH blepharocheilodontic syndrome 2 (ortholog); COVID-19 (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apicolateral plasma membrane (ortholog) NW_004955511 2658879 2705992 + 102022316 AGCD01066425;AGCD01066426;GBBH01032167;XM_005408012;XM_005408017;XM_005408018;XM_013506443;XM_013506444;XM_013506445;XM_013506446;XM_013506447;XM_013506448;XM_013506449;XM_013506450;XM_013506451 XP_005408069;XP_005408074;XP_005408075;XP_013361897;XP_013361898;XP_013361899;XP_013361900;XP_013361901;XP_013361902;XP_013361903;XP_013361904;XP_013361905 MODEL 10231753 protein-coding LOC106148540 THAP domain-containing protein 4-like NW_004955423 4361090 4361954 - 106148540 AGCD01023534;GBBH01172557;XM_013514442 XP_013369896 MODEL 8926177 protein-coding Ccdc71 coiled-coil domain containing 71 ASSOCIATED WITH esophageal cancer (ortholog) NW_004955532 1150053 1153965 - 102010628 AGCD01070166;GBDJ01180456;XM_005410193;XM_005410194 XP_005410250;XP_005410251 MODEL 8948256 protein-coding Cadm1 cell adhesion molecule 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); bone development (ortholog); calcium-independent cell-cell adhesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); cell body fiber (ortholog) NW_004955412 16673401 17005082 - 102016685 AGCD01012903;AGCD01012904;AGCD01012905;GBDI01278225;XM_005378170;XM_005378171;XM_005378172;XM_005378173;XM_005378174;XM_005378175 XP_005378227;XP_005378228;XP_005378229;XP_005378230;XP_005378231;XP_005378232 MODEL 8995857 protein-coding Evi2a ecotropic viral integration site 2A FOUND IN plasma membrane (ortholog) NW_004955481 6346024 6350216 - 102016709 AGCD01057024;GBDF01307664;XM_005402795;XM_013503425 XP_005402852;XP_013358879 MODEL 8751975 ncrna LOC102025146 uncharacterized LOC102025146 NW_004955429 15336841 15349273 - 102025146 AGCD01028803;AGCD01028804;GBDF01017223;XR_261338 MODEL 8713347 protein-coding Eef1akmt1 EEF1A lysine methyltransferase 1 ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog) NW_004955497 1509855 1540786 - 102012103 AGCD01062464;AGCD01062465;GBDK01144753;XM_005406311;XM_013505465 XP_005406368;XP_013360919 MODEL 39131674 rrna 5S_rRNA 5S ribosomal RNA 10243306 protein-coding LOC106147447 kielin/chordin-like protein NW_004955560 1887125 1928100 - 106147447 AGCD01073777;AGCD01073778;AGCD01073779;AGCD01073780;AGCD01073781;AGCD01073782;AGCD01073783;AGCD01073784;AGCD01073785;XM_013509068 XP_013364522 MODEL 8844659 pseudo LOC102005159 E3 SUMO-protein ligase PIAS2-like NW_004955503 7889282 7891162 + 102005159 AGCD01064803 MODEL 9059877 protein-coding LOC102003708 UDP-glucuronosyltransferase 2B20-like NW_004955447 4180631 4374845 - 102003708 AGCD01040708;AGCD01040709;AGCD01040710;AGCD01040711;AGCD01040712;AGCD01040713;AGCD01040714;AGCD01040715;GBDF01017425;XM_005392805;XM_005392807;XM_005392808 XP_005392862;XP_005392864;XP_005392865 MODEL 8922533 pseudo LOC102011225 olfactory receptor 1013-like NW_004955511 1812470 1813401 + 102011225 AGCD01066380 MODEL 8726261 protein-coding Qrfp pyroglutamylated RFamide peptide ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide hormone activity (ortholog); orexigenic neuropeptide QRFP receptor binding (ortholog); INVOLVED IN grooming behavior (ortholog); locomotory behavior (ortholog); neuropeptide signaling pathway (ortholog) NW_004955513 802809 805835 - 102017901 AGCD01066832;GBCE01009059;XM_005408349 XP_005408406 MODEL 39133914 misc_rna 7SK 7SK RNA 8756279 protein-coding Pofut4 protein O-fucosyltransferase 4 ENCODES a protein that exhibits fucosyltransferase activity (ortholog); peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN N-glycan processing (ortholog); positive regulation of protein secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 18126165 18132874 - 102014710 AGCD01034775;AGCD01034776;AGCD01034777;GBDF01010401;GBDF01010402;XM_005389967 XP_005390024 MODEL 8776131 pseudo LOC102006591 mimitin, mitochondrial pseudogene NW_004955423 25450663 25451169 - 102006591 AGCD01024075 MODEL 8904230 protein-coding Ralbp1 ralA binding protein 1 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN doxorubicin transport (ortholog); endocytosis (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; vinblastine pharmacodynamics pathway; vincristine pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); nuclear body (ortholog) NW_004955402 2571672 2616040 - 102023859 AGCD01000084;AGCD01000085;AGCD01000086;GBCB01039887;XM_005372598;XM_005372599;XM_005372600;XM_005372601 XP_005372655;XP_005372656;XP_005372657;XP_005372658 MODEL 8848976 ncrna LOC102009277 uncharacterized LOC102009277 NW_004955474 12346167 12355317 - 102009277 AGCD01054658;GBDK01287845;XR_001230737;XR_001230738 MODEL 8734750 protein-coding Lrrc4c leucine rich repeat containing 4C ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cell-cell adhesion mediator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of excitatory synapse assembly (ortholog); regulation of axonogenesis (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN dendritic spine membrane (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955422 5637650 6854173 + 102028978 AGCD01022582;AGCD01022583;AGCD01022584;AGCD01022585;AGCD01022586;AGCD01022587;AGCD01022588;AGCD01022589;AGCD01022590;AGCD01022591;AGCD01022592;AGCD01022593;AGCD01022594;AGCD01022595;AGCD01022596;AGCD01022597;AGCD01022598;AGCD01022599;AGCD01022600;AGCD01022601;AGCD01022602;AGCD01022603;AGCD01022604;AGCD01022605;AGCD01022606;AGCD01022607;AGCD01022608;AGCD01022609;GBBH01192644;XM_005384093;XM_005384094;XM_005384095;XM_005384097;XM_013514327;XR_001234018 XP_005384150;XP_005384151;XP_005384152;XP_005384154;XP_013369781 MODEL 8793634 protein-coding Tsc1 TSC complex subunit 1 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); adult locomotory behavior (ortholog); associative learning (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); Angiofibroma (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell projection (ortholog) NW_004955513 2197037 2244992 - 102030108 AGCD01066870;AGCD01066871;GBCE01045723;XM_005408396;XM_005408397;XM_005408399;XM_013506599;XM_013506600;XM_013506601;XM_013506602;XM_013506603 XP_005408453;XP_005408454;XP_005408456;XP_013362053;XP_013362054;XP_013362055;XP_013362056;XP_013362057 MODEL 8868369 protein-coding Duox1 dual oxidase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); FAD binding (ortholog); heme binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cuticle development (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell leading edge (ortholog); cell surface (ortholog) NW_004955409 8228754 8256575 - 102026407 AGCD01009388;AGCD01009389;GBBH01189153;GBDI01081510;XM_005377149;XM_013510312;XM_013510313 XP_005377206;XP_013365766;XP_013365767 MODEL 8745669 pseudo LOC102018653 uncharacterized protein C1orf131 homolog pseudogene NW_004955551 792384 801724 - 102018653 AGCD01072674;AGCD01072675 MODEL 8915487 pseudo LOC102012486 histone H3.1-like NW_004955581 100297 101951 + 102012486 AGCD01075657 MODEL 9011113 protein-coding LOC102012883 putative olfactory receptor 5AK3 NW_004955511 2055889 2056836 + 102012883 AGCD01066387;XM_005407982 XP_005408039 MODEL 8903092 protein-coding Coprs coordinator of PRMT5 and differentiation stimulator ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); muscle organ development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN methylosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955481 6794088 6797723 - 102020118 AGCD01057035;GBDF01046061;GBDJ01349647;XM_013503534 XP_013358988 MODEL 8991270 protein-coding Inppl1 inositol polyphosphate phosphatase like 1 ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN actin filament organization (ortholog); apoptotic process (ortholog); endochondral ossification (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; phosphatidylinositol 3-kinase class I signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN basal plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 19146304 19163923 - 102026208 AGCD01015301;AGCD01015302;GBDF01162302;GBDI01065852;XM_005379991;XM_005379992 XP_005380048;XP_005380049 MODEL 8865501 protein-coding LOC102003363 olfactory receptor 8K5-like NW_004955511 1379800 1390219 + 102003363 AGCD01066366;XM_005407957;XM_005407958;XM_005407959 XP_005408014;XP_005408015;XP_005408016 MODEL 730469173 misc_rna WT1-AS_8 WT1 antisense RNA conserved region 8 8946359 protein-coding Taf1 TATA-box binding protein associated factor 1 ENCODES a protein that exhibits acetyl-CoA binding (ortholog); DNA binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN cellular response to ATP (ortholog); cellular response to UV (ortholog); DNA damage response (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Adrenal Insufficiency (ortholog); allergic disease (ortholog); FOUND IN chromatin (ortholog); MLL1 complex (ortholog); nucleolus (ortholog) NW_004955475 10930175 11006876 + 102008090 AGCD01055127;AGCD01055128;AGCD01055129;AGCD01055130;AGCD01055131;GBDJ01313931;XM_005401669;XM_005401670;XM_005401671;XM_013502870 XP_005401726;XP_005401727;XP_005401728;XP_013358324 MODEL 8802648 protein-coding Baz2b bromodomain adjacent to zinc finger domain 2B ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955449 14008538 14278227 + 102004438 AGCD01042156;AGCD01042157;AGCD01042158;AGCD01042159;AGCD01042160;AGCD01042161;AGCD01042162;AGCD01042163;GBDK01140899;XM_013518699;XM_013518700;XM_013518701;XM_013518702;XM_013518703;XM_013518704;XM_013518705 XP_013374153;XP_013374154;XP_013374155;XP_013374156;XP_013374157;XP_013374158;XP_013374159 MODEL 8710773 pseudo LOC102024077 olfactory receptor-like protein OLF4 NW_004955626 120729 121640 + 102024077 AGCD01077468 MODEL 8717966 protein-coding Ppif peptidylprolyl isomerase F ENCODES a protein that exhibits cyclosporin A binding (ortholog); enzyme inhibitor activity (ortholog); peptide binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic process (ortholog); cellular response to arsenic-containing substance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial permeability transition pore complex (ortholog) NW_004955437 13295766 13301918 - 102018024 AGCD01034655;GBCQ01093166;XM_005389888 XP_005389945 MODEL 126903055 snorna SNORA5 Small nucleolar RNA SNORA5 8801385 protein-coding Slc17a7 solute carrier family 17 member 7 ENCODES a protein that exhibits chloride channel activity (ortholog); extracellularly glutamate-gated chloride channel activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chloride transport (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH learning disability (ortholog); Memory Disorders (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cerebellar mossy fiber (ortholog); excitatory synapse (ortholog); membrane (ortholog) NW_004955559 1399182 1409074 + 102017170 AGCD01073644;GBDF01145535;XM_005412884 XP_005412941 MODEL 8884753 protein-coding S100a4 S100 calcium binding protein A4 ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); clear cell renal cell carcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleoplasm (ortholog) NW_004955545 192236 194468 - 102012128 AGCD01071776;GBCE01002936;XM_005411410 XP_005411467 MODEL 9039477 ncrna LOC102007724 uncharacterized LOC102007724 NW_004955403 45845767 45849351 - 102007724 AGCD01002838;GBDF01008253;XR_259240 MODEL 39133334 snrna U4 U4 spliceosomal RNA 8959807 protein-coding Rfx7 regulatory factor X7 ENCODES a protein that exhibits RNA polymerase II core promoter sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 71 with behavioral abnormalities (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955409 59535 121157 + 102006985 AGCD01009138;GBDI01261564;XM_005376598;XM_005376600;XM_005376601 XP_005376655;XP_005376657;XP_005376658 MODEL 39134472 misc_rna 7SK 7SK RNA 8902229 ncrna LOC102006227 uncharacterized LOC102006227 NW_004955465 7168095 7203880 + 102006227 AGCD01050456;AGCD01050457;GBBH01168662;XR_263249;XR_263250 MODEL 9012143 protein-coding Ptger4 prostaglandin E receptor 4 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); allergic asthma (ortholog); Alzheimer's disease (ortholog); FOUND IN neuron projection terminus (ortholog); neuronal cell body (ortholog); nuclear membrane (ortholog) NW_004955426 24997811 25010822 + 102024139 AGCD01026701;GBDF01055599;XM_005386240 XP_005386297 MODEL 8957254 protein-coding LOC102011226 olfactory receptor 10AG1-like NW_004955511 918179 920370 - 102011226 AGCD01066346;XM_005408217 XP_005408274 MODEL 8861293 protein-coding Ctnnd2 catenin delta 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN dendritic spine morphogenesis (ortholog); learning (ortholog); morphogenesis of a branching structure (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleus (ortholog); perikaryon (ortholog) NW_004955426 635287 1007389 - 102004402 AGCD01026003;AGCD01026004;AGCD01026005;GBCE01050163;GBDF01278836;XM_013515019;XM_013515020;XM_013515021;XM_013515022 XP_013370473;XP_013370474;XP_013370475;XP_013370476 MODEL 8984178 protein-coding LOC102025863 keratin-associated protein 16-1-like NW_004955451 15500701 15514727 - 102025863 AGCD01043611;AGCD01043612;XM_013519126 XP_013374580 MODEL 8917095 protein-coding LOC102025147 mannose-binding protein A-like NW_004955510 239781 243643 - 102025147 AGCD01066142;GBDF01235188;XM_005407864;XM_005407865;XM_013506332 XP_005407921;XP_005407922;XP_013361786 MODEL 8896025 protein-coding Fntb farnesyltransferase, CAAX box, subunit beta ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); geranylgeranyl diphosphate synthase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) NW_004955466 4858628 4940247 - 102024323 AGCD01050853;AGCD01050854;AGCD01050855;AGCD01050856;AGCD01050857;AGCD01050858;AGCD01050859;AGCD01050860;AGCD01050861;GBBH01005420;XM_005399112;XM_013521891 XP_005399169;XP_013377345 MODEL 8982980 protein-coding Tigd3 tigger transposable element derived 3 ASSOCIATED WITH stomach cancer (ortholog); urinary bladder cancer (ortholog); uveal melanoma (ortholog) NW_004955422 19880777 19883567 - 102010815 AGCD01023044;GBDF01055732;XM_005384499 XP_005384556 MODEL 730469076 snorna SNORD45 Small nucleolar RNA SNORD45 8861341 protein-coding Lrrc52 leucine rich repeat containing 52 ENCODES a protein that exhibits potassium channel activator activity (ortholog); potassium channel activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955462 11115888 11137501 - 102005346 AGCD01049385;GBDF01001668;XM_005398247 XP_005398304 MODEL 8962494 protein-coding Eef1akmt2 EEF1A lysine methyltransferase 2 ENCODES a protein that exhibits methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955477 2739310 2779184 - 102005371 AGCD01055526;AGCD01055527;AGCD01055528;AGCD01055529;AGCD01055530;AGCD01055531;AGCD01055532;GBBH01222270;XM_005401982 XP_005402039 MODEL 8965988 ncrna LOC102010413 uncharacterized LOC102010413 NW_004955440 18515406 18523978 + 102010413 AGCD01036611;AGCD01036612;GBDI01160681;XR_262044 MODEL 8992809 protein-coding Arid4b AT-rich interaction domain 4B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN chromatin organization (ortholog); establishment of Sertoli cell barrier (ortholog); genomic imprinting (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955492 4593335 4730073 + 102023710 AGCD01060726;AGCD01060727;AGCD01060728;GBDF01049060;XM_005404948;XM_005404950 XP_005405005;XP_005405007 MODEL 8732285 protein-coding Chmp1b charged multivesicular body protein 1B ENCODES a protein that exhibits identical protein binding (ortholog); MIT domain binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cell division (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); endosome membrane (ortholog) NW_004955402 1196912 1199480 - 102015902 AGCD01000051;GBBH01206444;XM_005372575 XP_005372632 MODEL 8884960 protein-coding Shmt1 serine hydroxymethyltransferase 1 ENCODES a protein that exhibits aldehyde-lyase activity (ortholog); amino acid binding (ortholog); glycine hydroxymethyltransferase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); carnitine biosynthetic process (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Animal Disease Models (ortholog); breast cancer (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955478 10972791 11001535 + 102019598 AGCD01056156;AGCD01056157;GBDJ01273556;XM_005402276;XM_005402277;XM_013503178 XP_005402333;XP_005402334;XP_013358632 MODEL 9055858 protein-coding Dcc DCC netrin 1 receptor ENCODES a protein that exhibits identical protein binding (ortholog); netrin receptor activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN anterior/posterior axon guidance (ortholog); axon development (ortholog); axon guidance (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); amenorrhea (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); growth cone membrane (ortholog); membrane (ortholog) NW_004955402 37123112 38218876 + 102023650 AGCD01000941;AGCD01000942;AGCD01000943;AGCD01000944;AGCD01000945;AGCD01000946;AGCD01000947;AGCD01000948;AGCD01000949;AGCD01000950;AGCD01000951;AGCD01000952;AGCD01000953;AGCD01000954;AGCD01000955;AGCD01000956;AGCD01000957;AGCD01000958;GBDF01123902;XM_005372942;XM_005372943;XM_005372944 XP_005372999;XP_005373000;XP_005373001 MODEL 8897509 protein-coding LOC102021999 uncharacterized LOC102021999 NW_004955511 2647517 2649065 - 102021999 AGCD01066422;GBDF01304076;XM_013506441 XP_013361895 MODEL 10308957 ncrna LOC106148541 uncharacterized LOC106148541 NW_004955423 4217686 4230292 - 106148541 AGCD01023529;GBBH01138077;XR_001234087 MODEL 8867349 protein-coding Ccdc71l coiled-coil domain containing 71 like NW_004955434 21505839 21509427 - 102018126 AGCD01032631;GBDI01041309;GBDK01201868;XM_013516289 XP_013371743 MODEL 8777879 protein-coding Qrfpr pyroglutamylated RFamide peptide receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH bone structure disease (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN non-motile cilium (ortholog) NW_004955428 19238479 19290510 + 102020145 AGCD01028088;AGCD01028089;AGCD01028090;AGCD01028091;XM_005386788 XP_005386845 MODEL 8802281 protein-coding Elf2 E74 like ETS transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955428 4458962 4550783 + 102020823 AGCD01027693;AGCD01027694;AGCD01027695;GBDI01140584;XM_005386699;XM_005386701;XM_005386702;XM_005386703;XM_013515278;XM_013515279;XM_013515280;XM_013515281;XM_013515282;XM_013515283;XM_013515284;XM_013515285;XM_013515286 XP_005386756;XP_005386758;XP_005386759;XP_005386760;XP_013370732;XP_013370733;XP_013370734;XP_013370735;XP_013370736;XP_013370737;XP_013370738;XP_013370739;XP_013370740 MODEL 8742618 protein-coding Pogk pogo transposable element derived with KRAB domain ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955462 10075834 10089954 - 102028390 AGCD01049351;AGCD01049352;GBBH01101820;GBBH01101821;XM_005398238 XP_005398295 MODEL 8809653 pseudo LOC102029781 ribosomal L1 domain-containing protein 1 pseudogene NW_004955519 1415666 1421801 + 102029781 AGCD01067890 MODEL 9017245 pseudo LOC102018657 cryptochrome-1-like NW_004955555 1524678 1525436 - 102018657 AGCD01073085 MODEL 39132649 rrna 5S_rRNA 5S ribosomal RNA 8811038 protein-coding LOC102005501 chloride channel protein ClC-Ka NW_004955527 2203583 2213969 - 102005501 AGCD01069424;GBCQ01008207;XM_005409849;XM_005409850;XM_013507416 XP_005409906;XP_005409907;XP_013362870 MODEL 8887802 protein-coding LOC102003364 olfactory receptor 9I1-like NW_004955511 2907070 2908010 - 102003364 AGCD01066433;AGCD01066434;XM_013506378 XP_013361832 MODEL 8853253 ncrna LOC102003710 uncharacterized LOC102003710 NW_004955575 880017 890569 + 102003710 AGCD01075230;GBDF01020002;XR_265070 MODEL 8928253 protein-coding Taf10 TATA-box binding protein associated factor 10 ENCODES a protein that exhibits DNA binding (ortholog); enzyme binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN allantois development (ortholog); apoptotic process (ortholog); DNA-templated transcription initiation (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); familial hypertrophic cardiomyopathy (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 22322954 22324412 - 102027062 AGCD01015452;AGCD01015453;GBBH01001860;GBDF01006506;XM_005380163 XP_005380220 MODEL 39133915 misc_rna 7SK 7SK RNA 8799016 pseudo LOC102006594 tRNA methyltransferase 10 homolog A-like NW_004955425 7417174 7418366 + 102006594 AGCD01025385 MODEL 9064120 protein-coding Ppig peptidylprolyl isomerase G ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955449 4915747 4958456 - 102027130 AGCD01041902;AGCD01041903;GBBH01033225;XM_005393254;XM_005393255;XM_005393256 XP_005393311;XP_005393312;XP_005393313 MODEL 39134473 misc_rna 7SK 7SK RNA 8860734 pseudo LOC102009279 60S ribosomal protein L34 pseudogene NW_004955477 5072715 5073707 + 102009279 AGCD01055590 MODEL 9045347 protein-coding Rfx8 regulatory factor X8 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955470 7128811 7191466 - 102017765 AGCD01052792;AGCD01052793;AGCD01052794;GBDF01085190;XM_005400761 XP_005400818 MODEL 8734707 protein-coding Ptges prostaglandin E synthase ENCODES a protein that exhibits glutathione binding (ortholog); glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN cellular response to resveratrol (ortholog); chronic inflammatory response (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Barrett's esophagus (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955445 10053745 10056981 + 102028350 AGCD01039640;XM_005392576 XP_005392633 MODEL 8969773 protein-coding Ralgapa1 Ral GTPase activating protein catalytic subunit alpha 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955409 25336503 25582881 + 102027724 AGCD01010113;AGCD01010114;AGCD01010115;AGCD01010116;AGCD01010117;AGCD01010118;GBDF01112173;XM_005376915;XM_005376917;XM_005376919;XM_013510369;XM_013510370;XM_013510371;XM_013510372;XM_013510373 XP_005376972;XP_005376974;XP_005376976;XP_013365823;XP_013365824;XP_013365825;XP_013365826;XP_013365827 MODEL 8817908 protein-coding LOC102006228 histone H3 ENCODES a protein that exhibits structural constituent of chromatin (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); nucleosome assembly (ortholog); FOUND IN chromatin (ortholog); extracellular exosome (ortholog); nucleoplasm (ortholog) NW_004955465 13338289 13339268 + 102006228 AGCD01050601;XM_005398948 XP_005399005 MODEL 9064412 ncrna LOC102011229 uncharacterized LOC102011229 NW_004955515 241 57618 - 102011229 AGCD01067170;AGCD01067171;AGCD01067172;AGCD01067173;AGCD01067174;AGCD01067175;AGCD01067176;AGCD01067177;AGCD01067178;AGCD01067179;AGCD01067180;AGCD01067181;GBCE01018606;XR_264517 MODEL 9054062 protein-coding Dennd4a DENN domain containing 4A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955450 9723234 9851303 + 102003506 AGCD01042596;AGCD01042597;AGCD01042598;AGCD01042599;AGCD01042600;GBDI01262700;XM_005393707;XM_005393708;XM_005393709;XM_005393710;XM_005393711;XM_005393712;XM_005393713 XP_005393764;XP_005393765;XP_005393766;XP_005393767;XP_005393768;XP_005393769;XP_005393770 MODEL 9004275 protein-coding Duox2 dual oxidase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN adenohypophysis morphogenesis (ortholog); bone mineralization (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); cholera (ortholog); FOUND IN anchoring junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955409 8270657 8288201 + 102026725 AGCD01009391;AGCD01009392;AGCD01009393;GBDI01081489;XM_013510065 XP_013365519 MODEL 10167159 ncrna LOC106147448 uncharacterized LOC106147448 NW_004955561 964179 968551 - 106147448 AGCD01073827;GBDF01000293;XR_001232355 MODEL 8818909 protein-coding Ctns cystinosin, lysosomal cystine transporter ENCODES a protein that exhibits L-cystine transmembrane transporter activity (ortholog); solute:proton symporter activity (ortholog); INVOLVED IN adult walking behavior (ortholog); ATP metabolic process (ortholog); brain development (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH Abderhalden-Kaufmann-Lignac Syndrome (ortholog); acne (ortholog); astigmatism (ortholog); FOUND IN early endosome (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) NW_004955467 13151663 13169005 - 102021112 AGCD01051667;GBDF01082657;XM_005399718;XM_005399719;XM_005399720;XM_005399721 XP_005399775;XP_005399776;XP_005399777;XP_005399778 MODEL 8941615 protein-coding LOC102012885 olfactory receptor 1052-like NW_004955511 1009362 1010300 + 102012885 AGCD01066353;XM_005408220 XP_005408277 MODEL 9053379 protein-coding Cops2 COP9 signalosome subunit 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); inner cell mass cell proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); endometriosis (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); intercellular bridge (ortholog) NW_004955409 4859971 4888487 + 102006217 AGCD01009300;AGCD01009301;GBDF01082166;XM_005376679;XM_005376680 XP_005376736;XP_005376737 MODEL 8705700 ncrna LOC102005160 uncharacterized LOC102005160 NW_004955505 2073316 2169827 - 102005160 AGCD01064984;AGCD01064985;GBDF01195356;XR_001231571;XR_264302;XR_264303 MODEL 8835999 protein-coding Bbc3 BCL2 binding component 3 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH brain ischemia (ortholog); Burkitt lymphoma (ortholog); Esophageal Neoplasms (ortholog); FOUND IN lysosome (ortholog); mitochondrion (ortholog) NW_004955574 1167790 1174966 - 102005648 AGCD01075159;AGCD01075160;GBDF01158488;XM_005413854;XM_013509578 XP_005413911;XP_013365032 MODEL 8797788 protein-coding Wtap WT1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA processing (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) NW_004955439 21149970 21174479 - 102017706 AGCD01036142;AGCD01036143;GBCE01054140;GBDJ01127571;XM_013517328 XP_013372782 MODEL 8969023 pseudo LOC102024080 protein SGT1 homolog NW_004955403 2839891 2841159 + 102024080 AGCD01001739 MODEL 730468945 snorna SNORA5 Small nucleolar RNA SNORA5 8889750 protein-coding LOC102010423 olfactory receptor 7G2-like NW_004955563 285695 286633 - 102010423 AGCD01074059;XM_013509134 XP_013364588 MODEL 8899682 protein-coding Focad focadhesin ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog) NW_004955434 22951571 23230790 + 102003371 AGCD01032689;AGCD01032690;AGCD01032691;AGCD01032692;AGCD01032693;AGCD01032694;AGCD01032695;AGCD01032696;AGCD01032697;AGCD01032698;AGCD01032699;GBBH01214113;XM_005388739;XM_005388740;XM_005388741;XM_013516350 XP_005388796;XP_005388797;XP_005388798;XP_013371804 MODEL 9050234 protein-coding Lrrc53 leucine rich repeat containing 53 NW_004955423 18141159 18204497 + 102030440 AGCD01023866;XM_013514452 XP_013369906 MODEL 8756996 protein-coding Slc17a8 solute carrier family 17 member 8 ENCODES a protein that exhibits chloride channel activity (ortholog); L-glutamate uniporter activity (ortholog); sodium:phosphate symporter activity (ortholog); INVOLVED IN cochlea development (ortholog); L-glutamate import (ortholog); L-glutamate transmembrane transport (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 25 (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical dendrite (ortholog); axon terminus (ortholog); basal dendrite (ortholog) NW_004955405 36063688 36115312 + 102021302 AGCD01005409;XM_005374531;XM_005374532 XP_005374588;XP_005374589 MODEL 9002250 protein-coding LOC102007725 ubiquitin carboxyl-terminal hydrolase 16-like NW_004957393 10 1496 + 102007725 AGCD01080789;GBCC01037265;XM_013510251 XP_013365705 MODEL 8743302 protein-coding Cadm2 cell adhesion molecule 2 INVOLVED IN synaptic membrane adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955407 7070355 7355841 - 102026830 AGCD01006971;AGCD01006972;AGCD01006973;AGCD01006974;AGCD01006975;GBDI01319083;XM_005375539 XP_005375596 MODEL 8999687 protein-coding Arid5a AT-rich interaction domain 5A ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); chondrocyte differentiation (ortholog); ASSOCIATED WITH stomach cancer (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955470 3951010 3964391 + 102018821 AGCD01052713;GBDJ01387156;XM_005400666;XM_013522832;XM_013522833 XP_005400723;XP_013378286;XP_013378287 MODEL 9033228 protein-coding Evi2b ecotropic viral integration site 2B INVOLVED IN positive regulation of granulocyte differentiation (ortholog) NW_004955481 6332220 6342374 - 102017236 AGCD01057024;GBDK01241136;XM_005402796 XP_005402853 MODEL 39131675 rrna 5S_rRNA 5S ribosomal RNA 8979075 protein-coding LOC102003711 protein FAM170A-like NW_004955582 198318 205621 + 102003711 AGCD01075748;AGCD01075749;GBDF01050789;XM_005414281;XM_005414282 XP_005414338;XP_005414339 MODEL 8776719 protein-coding LOC102022000 uncharacterized LOC102022000 NW_004955429 15258958 15261931 - 102022000 AGCD01028800;GBCQ01069001;XM_005387257 XP_005387314 MODEL 8721807 ncrna LOC102012487 uncharacterized LOC102012487 NW_004955449 15407328 15451351 + 102012487 AGCD01042194;XR_262507 MODEL 8926086 protein-coding Tsc2 TSC complex subunit 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); GTPase activator activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN anoikis (ortholog); cell projection organization (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN mitogen activated protein kinase signaling pathway; mTOR signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); Acute Hepatitis (ortholog); acute myeloid leukemia (ortholog); FOUND IN caveola (ortholog); cell projection (ortholog); cytoplasm (ortholog) NW_004955442 15178356 15216978 - 102006398 AGCD01037860;GBDI01113122;XM_005391468;XM_005391470;XM_013517657;XM_013517658;XM_013517660;XM_013517661;XM_013517662 XP_005391525;XP_005391527;XP_013373111;XP_013373112;XP_013373114;XP_013373115;XP_013373116 MODEL 8725005 protein-coding LOC102025149 olfactory receptor 1013-like NW_004955511 1785957 1786877 + 102025149 AGCD01066380;XM_005408244 XP_005408301 MODEL 8746831 protein-coding Ins insulin ENCODES a protein that exhibits zinc ion binding; hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN protein hexamerization; acute-phase response (ortholog); alpha-beta T cell activation (ortholog); PARTICIPATES IN altered insulin signaling pathway; forkhead class A signaling pathway; gliclazide pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955422 13909408 13910419 - 102004941 AGCD01022841;AY823469;XM_005384189 AAX33327;XP_005384246 MODEL 8954683 protein-coding Poglut1 protein O-glucosyltransferase 1 ENCODES a protein that exhibits EGF-domain serine glucosyltransferase activity (ortholog); EGF-domain serine xylosyltransferase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN axial mesoderm development (ortholog); circulatory system development (ortholog); muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2Z (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955427 19188512 19206050 + 102018417 AGCD01027359;AGCD01027360;GBDJ01299744;XM_005386444 XP_005386501 MODEL 626189176 snorna SNORD45 Small nucleolar RNA SNORD45 8938852 protein-coding Eef1akmt3 EEF1A lysine methyltransferase 3 ENCODES a protein that exhibits heat shock protein binding (ortholog); methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955458 5482524 5488040 + 102012741 AGCD01047494;GBDI01385591;XM_005397419 XP_005397476 MODEL 8912391 protein-coding Tigd4 tigger transposable element derived 4 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955471 7221636 7238289 - 102028953 AGCD01053142;AGCD01053143;GBCB01089350;XM_005400910;XM_013522901;XM_013522902 XP_005400967;XP_013378355;XP_013378356 MODEL 8888053 protein-coding S100a5 S100 calcium binding protein A5 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog); FOUND IN neuronal cell body (ortholog); nucleus (ortholog) NW_004955545 187159 190399 - 102011149 AGCD01071776;GBBH01139402;XM_005411406;XM_005411407;XM_005411408;XM_005411409 XP_005411463;XP_005411464;XP_005411465;XP_005411466 MODEL 8932825 protein-coding Chmp2a charged multivesicular body protein 2A ENCODES a protein that exhibits membrane bending activity (ortholog); phosphatidylcholine binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); chromatin (ortholog) NW_004955584 1156828 1160056 - 102021404 AGCD01075982;GBDF01047694;XM_005414402;XM_005414403;XM_013509884 XP_005414459;XP_005414460;XP_013365338 MODEL 10378497 protein-coding Dcd dermcidin ENCODES a protein that exhibits lipid binding (ortholog); monoatomic anion channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN antibacterial humoral response (ortholog); antibacterial innate immune response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Liver Neoplasms (ortholog); FOUND IN extracellular region (ortholog); extrinsic component of membrane (ortholog); membrane (ortholog) NW_004955458 1875244 1879434 - 106149940 AGCD01047206;GBCQ01054564;XM_013520796 XP_013376250 MODEL 10140563 ncrna LOC106148542 uncharacterized LOC106148542 NW_004955403 52243429 52249252 + 106148542 AGCD01003003;GBDJ01360189;XR_001234088 MODEL 8985980 pseudo LOC102029782 B-cell CLL/lymphoma 7 protein family member C pseudogene NW_004955520 303135 303678 - 102029782 AGCD01068015 MODEL 8875947 protein-coding Elf3 E74 like ETS transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); blastocyst development (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH biliary tract benign neoplasm (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 38126633 38131292 + 102021843 AGCD01006594;GBCQ01003498;XM_005375202;XM_013522296 XP_005375259;XP_013377750 MODEL 8815252 ncrna LOC102018669 uncharacterized LOC102018669 NW_004955450 1821752 1837551 + 102018669 AGCD01042371;GBDF01222200;XR_001235919;XR_262519 MODEL 8927331 protein-coding Ppih peptidylprolyl isomerase H ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN positive regulation of viral genome replication (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); U4/U6 snRNP (ortholog) NW_004955537 2211566 2229444 + 102010198 AGCD01070919;GBDF01086103;XM_005410598 XP_005410655 MODEL 8725629 protein-coding Ptges2 prostaglandin E synthase 2 ENCODES a protein that exhibits 12-hydroxyheptadecatrienoic acid synthase activity (ortholog); DNA binding (ortholog); lyase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); lipid metabolic process (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN prostaglandin biosynthetic pathway; type II interferon signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); Carbon Tetrachloride Poisoning (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrion (ortholog) NW_004955419 608313 612813 + 102017772 AGCD01019598;GBDF01127195;XM_005382381 XP_005382438 MODEL 39133335 snrna U4 U4 spliceosomal RNA 8989259 protein-coding LOC102012891 uncharacterized LOC102012891 NW_004955523 1028153 1037283 - 102012891 AGCD01068489;GBCE01116809;XM_013507151;XR_001231927;XR_001231928;XR_001231929;XR_001231930;XR_001231931;XR_001231932;XR_001231933;XR_001231934;XR_001231935;XR_001231936;XR_001231937 XP_013362605 MODEL 8936968 protein-coding Bbip1 BBSome interacting protein 1 INVOLVED IN B cell homeostasis (ortholog); cilium assembly (ortholog); eating behavior (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 18 (ortholog); cone-rod dystrophy (ortholog); esophageal cancer (ortholog); FOUND IN BBSome (ortholog); ciliary basal body (ortholog); ciliary membrane (ortholog) NW_004955485 518161 530575 + 102011009 AGCD01058451;AGCD01058452;GBDF01050063;GBDK01146124;XM_005403735 XP_005403792 MODEL 39133916 misc_rna 7SK 7SK RNA 8905044 pseudo LOC102010427 signal recognition particle subunit SRP72-like NW_004955569 166179 187432 - 102010427 AGCD01074565;AGCD01074566 MODEL 8997578 protein-coding Shmt2 serine hydroxymethyltransferase 2 ENCODES a protein that exhibits amino acid binding (ortholog); chromatin binding (ortholog); glycine hydroxymethyltransferase activity (ortholog); INVOLVED IN formate biosynthetic process (ortholog); glycine biosynthetic process (ortholog); glycine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN BRISC complex (ortholog); cytoplasm (ortholog); mitochondrial inner membrane (ortholog) NW_004955458 4957614 4962691 + 102022166 AGCD01047446;GBCQ01036093;XM_005397350 XP_005397407 MODEL 8852140 pseudo LOC102025870 selenide, water dikinase 1-like NW_004955454 3602847 3604239 - 102025870 AGCD01045094 MODEL 8879226 protein-coding Ccdc73 coiled-coil domain containing 73 ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955476 10612530 10726343 - 102028961 AGCD01055426;AGCD01055427;AGCD01055428;GBDF01224614;GBDF01224619;XM_013502982 XP_013358436 MODEL 8739900 protein-coding Qrich1 glutamine rich 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); integrated stress response signaling (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955532 1052174 1092211 - 102005298 AGCD01070164;AGCD01070165;GBDF01081240;XM_005410175;XM_005410176;XM_013507580;XM_013507581 XP_005410232;XP_005410233;XP_013363034;XP_013363035 MODEL 8864604 protein-coding Folh1b Putative N-acetylated-alpha-linked acidic dipeptidase ENCODES a protein that exhibits Ac-Asp-Glu binding (ortholog); metallocarboxypeptidase activity (ortholog); INVOLVED IN L-glutamate biosynthetic process (ortholog); positive regulation of glutamate receptor signaling pathway (ortholog) NW_004955414 3874182 3920616 - 102003751 AGCD01014845;AGCD01014846;GBBH01106825;XM_013512091 XP_013367545 MODEL 8842395 protein-coding LOC102009284 uncharacterized LOC102009284 NW_004955420 26735389 26736424 + 102009284 AGCD01021427;GBDF01043434;XM_005383475 XP_005383532 MODEL 8982356 protein-coding Rfxank regulatory factor X associated ankyrin containing protein ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); disease by infectious agent (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955524 2635358 2642206 - 102009536 AGCD01068827;GBDK01070389;XM_005409620;XM_005409621;XM_013507211;XM_013507212;XM_013507214 XP_005409677;XP_005409678;XP_013362665;XP_013362666;XP_013362668 MODEL 39133917 misc_rna 7SK 7SK RNA 8942682 protein-coding Evi5 ecotropic viral integration site 5 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955423 1784255 1997561 + 102021566 AGCD01023455;AGCD01023456;AGCD01023457;AGCD01023458;AGCD01023459;AGCD01023460;AGCD01023461;GBDI01158274;XM_005385043;XM_005385044;XM_013514416;XM_013514417;XM_013514418;XM_013514419;XM_013514420;XM_013514421;XM_013514422 XP_005385100;XP_005385101;XP_013369870;XP_013369871;XP_013369872;XP_013369873;XP_013369874;XP_013369875;XP_013369876 MODEL 8885925 protein-coding Ralgapa2 Ral GTPase activating protein catalytic subunit alpha 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN Ral protein signal transduction (ortholog); regulation of exocyst localization (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955415 28414856 28663485 - 102022075 AGCD01016641;AGCD01016642;AGCD01016643;GBCQ01150403;XM_005380947;XM_013512249 XP_005381004;XP_013367703 MODEL 8777023 protein-coding Tsc22d1 TSC22 domain family member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of hematopoietic stem cell proliferation (ortholog); negative regulation of programmed cell death (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955518 2322566 2451519 - 102010937 AGCD01067775;AGCD01067776;AGCD01067777;AGCD01067778;GBDF01010659;GBDF01010660;XM_005409075 XP_005409132 MODEL 9059924 protein-coding LOC102005505 homeobox protein ESX1-like NW_004955534 3330 9799 + 102005505 AGCD01070431;GBDF01222868;XM_005410423 XP_005410480 MODEL 8836665 pseudo LOC102003366 protein archease pseudogene NW_004955513 4104178 4104694 + 102003366 AGCD01066919 MODEL 10235051 protein-coding LOC106147449 cell death activator CIDE-3-like NW_004955561 1371052 1373545 - 106147449 AGCD01073852;GBDJ01009119;XM_013509093 XP_013364547 MODEL 730469162 snorna SNORD45 Small nucleolar RNA SNORD45 8841338 ncrna LOC102005164 uncharacterized LOC102005164 NW_004955432 18505196 18551305 - 102005164 AGCD01031143;AGCD01031144;AGCD01031145;AGCD01031146;AGCD01031147;GBDF01151735;XR_261533 MODEL 8977997 protein-coding Insc INSC spindle orientation adaptor protein ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of protein stability (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955414 30181402 30282279 + 102026418 AGCD01015728;AGCD01015729;AGCD01015730;GBCQ01127867;XM_013512094;XM_013512096 XP_013367548;XP_013367550 MODEL 8844232 protein-coding Cops3 COP9 signalosome subunit 3 INVOLVED IN in utero embryonic development (ortholog); positive regulation of keratinocyte differentiation (ortholog); protein deneddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955577 639616 664390 + 102019120 AGCD01075409;GBDF01002804;XM_005413974;XM_005413975 XP_005414031;XP_005414032 MODEL 730469407 snorna SNORA5 Small nucleolar RNA SNORA5 8957601 pseudo LOC102024082 ATP-dependent RNA helicase DDX18 pseudogene NW_004955405 18903983 18905723 - 102024082 AGCD01005029 MODEL 8753630 protein-coding Taf11 TATA-box binding protein associated factor 11 ENCODES a protein that exhibits DNA binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); nuclear vitamin D receptor binding (ortholog); INVOLVED IN host-mediated activation of viral transcription (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIID complex (ortholog) NW_004955437 2908939 2916154 - 102019843 AGCD01034292;GBCB01073288;XM_005389535 XP_005389592 MODEL 8907232 protein-coding Arid5b AT-rich interaction domain 5B ENCODES a protein that exhibits DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN adipose tissue development (ortholog); adrenal gland development (ortholog); cell development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN catalytic complex (ortholog) NW_004955425 15253951 15433246 + 102018846 AGCD01025575;AGCD01025576;AGCD01025577;AGCD01025578;AGCD01025579;AGCD01025580;GBCQ01066544;XM_005385946;XM_005385948 XP_005386003;XP_005386005 MODEL 8812593 protein-coding Wtip WT1 interacting protein ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); negative regulation of hippo signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN P-body (ortholog) NW_004955468 4082681 4106265 + 102005130 AGCD01051886;AGCD01051887;AGCD01051888;AGCD01051889;AGCD01051890;GBCE01095541;GBDI01225629;XM_013522520 XP_013377974 MODEL 39131676 rrna 5S_rRNA 5S ribosomal RNA 8877065 ncrna LOC102007728 uncharacterized LOC102007728 NW_004955405 808318 848689 - 102007728 AGCD01004585;AGCD01004586;AGCD01004587;AGCD01004588;GBDF01303416;XR_259358 MODEL 8930133 protein-coding Lrrc55 leucine rich repeat containing 55 ENCODES a protein that exhibits potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) NW_004955511 2278638 2287435 + 102014384 AGCD01066396;GBDF01113350;XM_013506516 XP_013361970 MODEL 8709099 protein-coding LOC102006596 3-ketoacyl-CoA thiolase B, peroxisomal NW_004955427 25541841 25552096 - 102006596 AGCD01027545;GBDK01085734;XM_013515208 XP_013370662 MODEL 9017804 pseudo LOC102022001 olfactory receptor 4A15-like NW_004955511 66830 67734 - 102022001 AGCD01066313 MODEL 8814119 pseudo LOC102003712 N-alpha-acetyltransferase 50 pseudogene NW_004955402 792233 792986 - 102003712 AGCD01000033 MODEL 8791097 pseudo LOC102011231 heterogeneous nuclear ribonucleoprotein F-like NW_004955516 4862856 4863984 - 102011231 AGCD01067538 MODEL 8984655 pseudo LOC102012489 B-cell CLL/lymphoma 7 protein family member C pseudogene NW_004955402 2619020 2627815 + 102012489 AGCD01000086 MODEL 8789252 protein-coding LOC102010431 olfactory receptor 13H1-like NW_004955580 1266092 1267030 - 102010431 AGCD01075652;XM_005414225 XP_005414282 MODEL 10186766 ncrna LOC106148543 uncharacterized LOC106148543 NW_004955423 18137256 18139188 - 106148543 AGCD01023866;XR_001234089 MODEL 8884264 protein-coding Duoxa1 dual oxidase maturation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide biosynthetic process (ortholog); hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell leading edge (ortholog); endoplasmic reticulum (ortholog) NW_004955409 8256707 8266891 + 102023560 AGCD01009390;AGCD01009391;GBCE01009592;XM_005376741;XM_005376742;XM_005376743;XM_013510336;XM_013510337 XP_005376798;XP_005376799;XP_005376800;XP_013365790;XP_013365791 MODEL 8817138 protein-coding Ctps1 CTP synthase 1 ENCODES a protein that exhibits CTP synthase activity (ortholog); histone H1N76/N77 asparagine deamidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN B cell proliferation (ortholog); CTP biosynthetic process (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); biliary tract benign neoplasm (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoophidium (ortholog) NW_004955537 773664 811084 + 102005415 AGCD01070874;AGCD01070875;GBDI01217608;XM_005410582;XM_005410584;XM_005410585 XP_005410639;XP_005410641;XP_005410642 MODEL 8926699 protein-coding Elf4 E74 like ETS transcription factor 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN natural killer cell proliferation (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of interleukin-1 beta production (ortholog); ASSOCIATED WITH autistic disorder (ortholog); AUTOINFLAMMATORY SYNDROME, FAMILIAL, X-LINKED, BEHCET-LIKE 2 (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); PML body (ortholog) NW_004955473 4934770 4986283 + 102010053 AGCD01053962;AGCD01053963;GBCQ01031364;XM_005401248;XM_005401249;XM_013523065;XM_013523066;XM_013523067 XP_005401305;XP_005401306;XP_013378519;XP_013378520;XP_013378521 MODEL 8958562 protein-coding Ptges3 prostaglandin E synthase 3 ENCODES a protein that exhibits DNA polymerase binding (ortholog); enzyme binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN cell population proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955458 4203075 4209967 - 102013802 AGCD01047385;GBDI01002083;GBDJ01074687;XM_005397329 XP_005397386 MODEL 39134474 misc_rna 7SK 7SK RNA 8938460 protein-coding Tigd5 tigger transposable element derived 5 NW_004955454 2299244 2304795 + 102023225 AGCD01045015;GBCE01018783;XM_013520026 XP_013375480 MODEL 8709084 protein-coding S100a9 S100 calcium binding protein A9 INVOLVED IN actin cytoskeleton organization (ortholog); astrocyte development (ortholog); autocrine signaling (ortholog); ASSOCIATED WITH Acute Otitis Media; adult respiratory distress syndrome (ortholog); celiac disease (ortholog); FOUND IN calprotectin complex (ortholog); cornified envelope (ortholog); cytoplasm (ortholog) NW_004955592 90647 93842 - 102006189 AGCD01076300;GBCC01036093;XM_005414603;XM_013509984 XP_005414660;XP_013365438 MODEL 8815736 protein-coding LOC102012892 uncharacterized LOC102012892 NW_004955526 2993975 3028797 + 102012892 AGCD01069325;AGCD01069326;XM_013507354 XP_013362808 MODEL 8980427 protein-coding Chmp2b charged multivesicular body protein 2B ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cognition (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955407 6014478 6047916 - 102026186 AGCD01006940;AGCD01006941;AGCD01006942;GBBH01142066;XM_005375538 XP_005375595 MODEL 8900418 pseudo LOC102024086 aldose reductase-related protein 2 pseudogene NW_004955454 8367664 8368575 + 102024086 AGCD01045324 MODEL 8975942 protein-coding Cadm3 cell adhesion molecule 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN heterophilic cell-cell adhesion (ortholog); homophilic cell-cell adhesion (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Charcot-Marie-Tooth Disease Axonal Type 2FF (ortholog); genetic disease (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); GABA-ergic synapse (ortholog) NW_004955468 10963773 10994266 + 102003332 AGCD01052109;GBDK01250126;XM_005400161;XM_005400163 XP_005400218;XP_005400220 MODEL 39132654 rrna 5S_rRNA 5S ribosomal RNA 8935185 protein-coding LOC102006229 histone H2A type 1-like NW_004955465 13334742 13337254 + 102006229 AGCD01050600;AGCD01050601;XM_005399011 XP_005399068 MODEL 39131677 rrna 5S_rRNA 5S ribosomal RNA 8891875 ncrna LOC102029789 uncharacterized LOC102029789 NW_004955436 15814250 15842765 + 102029789 AGCD01033901;GBDI01193176;XR_261791 MODEL 39133918 misc_rna 7SK 7SK RNA 8785472 protein-coding Qrich2 glutamine rich 2 INVOLVED IN flagellated sperm motility (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Asthenozoospermia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleus (ortholog) NW_004955506 5990070 6015808 + 102026451 AGCD01065396;AGCD01065397;AGCD01065398;GBDF01010040;XM_013506111;XM_013506112;XM_013506113 XP_013361565;XP_013361566;XP_013361567 MODEL 9015758 protein-coding Rfxap regulatory factor X associated protein ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hepatic fibrosis (ortholog); liver cirrhosis (ortholog); MHC class II deficiency (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955431 9200006 9209588 - 102014933 AGCD01030160;AGCD01030161;GBCB01034736;GBDJ01029212;XM_013515899 XP_013371353 MODEL 9027605 protein-coding Poglut2 protein O-glucosyltransferase 2 ENCODES a protein that exhibits EGF-domain serine glucosyltransferase activity (ortholog); EGF-domain serine xylosyltransferase activity (ortholog); UDP-glucosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog); protein O-linked glycosylation via xylose (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); nucleoplasm (ortholog) NW_004955404 8358542 8374216 + 102030378 AGCD01003351;GBDJ01275469;XM_005374028 XP_005374085 MODEL 39133336 snrna U4 U4 spliceosomal RNA 8947158 protein-coding Eef1b2 eukaryotic translation elongation factor 1 beta 2 INVOLVED IN response to ethanol (ortholog); PARTICIPATES IN translation elongation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) NW_004955457 8835121 8837816 - 102017633 AGCD01046919;GBDF01003870;XM_005397000 XP_005397057 MODEL 8868781 protein-coding Ralgapb Ral GTPase activating protein non-catalytic subunit beta ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN Ral protein signal transduction (ortholog); regulation of exocyst localization (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955445 18146316 18241128 - 102010426 AGCD01039898;AGCD01039899;AGCD01039900;AGCD01039901;GBCE01075919;XM_005392533;XM_005392534;XM_013518287;XM_013518288 XP_005392590;XP_005392591;XP_013373741;XP_013373742 MODEL 8960373 pseudo LOC102005166 cactin pseudogene NW_004955433 1837660 1843410 - 102005166 AGCD01031371 MODEL 9065210 protein-coding Slc17a9 solute carrier family 17 member 9 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); ATP transmembrane transporter activity (ortholog); guanine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); ATP export (ortholog); ATP transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromaffin granule membrane (ortholog); lysosomal membrane (ortholog); mucin granule (ortholog) NW_004955528 1124430 1139476 - 102019730 AGCD01069552;GBDK01265855;XM_005409998;XM_005410000;XM_005410001 XP_005410055;XP_005410057;XP_005410058 MODEL 8902221 protein-coding Insig1 insulin induced gene 1 ENCODES a protein that exhibits oxysterol binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to sterol (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); SREBP-SCAP-Insig complex (ortholog) NW_004955491 8333624 8344658 + 102005718 AGCD01060613;AGCD01060614;GBDF01005321;GBDF01005322;XM_005404901 XP_005404958 MODEL 8928136 protein-coding Bbln bublin coiled coil protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); bone development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); cell junction (ortholog); intermediate filament (ortholog) NW_004955570 709009 712573 + 102021188 AGCD01074759;AGCD01074760;GBDF01193225;XM_005413526 XP_005413583 MODEL 8893070 protein-coding Dcdc2 doublecortin domain containing 2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN cilium assembly (ortholog); dendrite morphogenesis (ortholog); neuron migration (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive nonsyndromic deafness 66 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955483 2608063 2783872 + 102011993 AGCD01057682;AGCD01057683;AGCD01057684;AGCD01057685;AGCD01057686;AGCD01057687;AGCD01057688;AGCD01057689;GBBH01142103;XM_005403372;XM_005403373;XM_005403375 XP_005403429;XP_005403430;XP_005403432 MODEL 8760780 protein-coding Dennd4b DENN domain containing 4B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of Rab protein signal transduction (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955545 526057 541118 - 102022964 AGCD01071799;GBDI01131695;GBDI01131819;XM_005411455;XM_013508225 XP_005411512;XP_013363679 MODEL 8825026 protein-coding LOC102024088 transmembrane epididymal protein 1A-like NW_004955406 21319459 21320241 + 102024088 AGCD01006123;XM_005375465 XP_005375522 MODEL 8877583 protein-coding Ccdc77 coiled-coil domain containing 77 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955454 6721624 6769223 - 102028494 AGCD01045263;AGCD01045264;AGCD01045265;AGCD01045266;AGCD01045267;AGCD01045268;GBBH01030599;GBDK01016879;XM_013520216 XP_013375670 MODEL 8857221 protein-coding LOC102025154 zinc finger protein 85-like NW_004955432 4681460 4704789 - 102025154 AGCD01030733;AGCD01030734;AGCD01030735;AGCD01030736;AGCD01030737;GBBH01213954;GBCQ01068809;XM_013515932 XP_013371386 MODEL 8745483 ncrna LOC102006597 uncharacterized LOC102006597 NW_004955511 5768199 5770593 + 102006597 AGCD01066580;GBCB01022175;XR_001231697 MODEL 9067063 ncrna LOC102018672 uncharacterized LOC102018672 NW_004955450 16469003 16471165 - 102018672 AGCD01042844;GBDF01179379;XR_001235843 MODEL 39132274 rrna 5S_rRNA 5S ribosomal RNA 8706237 protein-coding Tsc22d2 TSC22 domain family member 2 INVOLVED IN negative regulation of cell cycle (ortholog); response to osmotic stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955448 1639463 1678279 + 102024397 AGCD01041265;GBCE01089585;GBDI01261302;XM_013518634 XP_013374088 MODEL 8834985 protein-coding Ppil1 peptidylprolyl isomerase like 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN embryonic brain development (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955437 6131013 6143474 + 102024382 AGCD01034418;AGCD01034419;AGCD01034420;GBBH01121509;XM_005389635 XP_005389692 MODEL 8877767 ncrna LOC102005511 uncharacterized LOC102005511 NW_004955545 2705974 2709122 - 102005511 AGCD01071919;GBDI01034537;XR_001232179;XR_264880 MODEL 8713119 ncrna LOC102003369 uncharacterized LOC102003369 NW_004955518 211147 307647 + 102003369 AGCD01067721;AGCD01067722;AGCD01067723;AGCD01067724;AGCD01067725;AGCD01067726;AGCD01067727;GBDF01095069;XR_001231851;XR_001231852 MODEL 10257894 ncrna LOC106147450 uncharacterized LOC106147450 NW_004955561 1737039 1737795 + 106147450 AGCD01073864;GBDK01424128;XR_001232358 MODEL 39133919 misc_rna 7SK 7SK RNA 9024632 protein-coding Cops4 COP9 signalosome subunit 4 INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955474 6540022 6581881 - 102030414 AGCD01054481;AGCD01054482;GBCE01096177;XM_005401387;XM_013502770 XP_005401444;XP_013358224 MODEL 39131402 protein-coding TAF12 TATA-box binding protein associated factor 12 8930877 ncrna LOC102025871 uncharacterized LOC102025871 NW_004955455 3370611 3377968 - 102025871 AGCD01045622;GBDF01086770;XR_262818 MODEL 8971570 protein-coding Shoc1 shortage in chiasmata 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN reciprocal meiotic recombination (ortholog); resolution of meiotic recombination intermediates (ortholog); synaptonemal complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955419 15563949 15644502 + 102008317 AGCD01020083;AGCD01020084;GBDF01052150;XM_005382715;XM_005382716;XM_005382717 XP_005382772;XP_005382773;XP_005382774 MODEL 8879409 protein-coding LOC102007735 uncharacterized LOC102007735 NW_004955455 3711041 3735232 - 102007735 AGCD01045648;XM_005396209;XR_001236266 XP_005396266 MODEL 9009386 pseudo LOC102005168 uncharacterized LOC102005168 NW_004955434 10798324 10816183 - 102005168 AGCD01032363;AGCD01032364;AGCD01032365 MODEL 8822238 protein-coding Folr1 folate receptor alpha ENCODES a protein that exhibits folic acid binding (ortholog); folic acid receptor activity (ortholog); INVOLVED IN anterior neural tube closure (ortholog); axon regeneration (ortholog); cardiac neural crest cell migration involved in outflow tract morphogenesis (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; ASSOCIATED WITH cerebral folate receptor alpha deficiency (ortholog); Colonic Neoplasms (ortholog); Congenital Abnormalities (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955414 19188830 19197728 - 102026741 AGCD01015304;AGCD01015305;GBDI01075358;XM_005379993;XM_005379994;XM_013511700;XM_013511701 XP_005380050;XP_005380051;XP_013367154;XP_013367155 MODEL 9004566 protein-coding Tigit T cell immunoreceptor with Ig and ITIM domains ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of interleukin-12 production (ortholog); negative regulation of natural killer cell mediated cytotoxicity (ortholog); negative regulation of T cell activation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955427 14358326 14381074 + 102009969 AGCD01027271;GBBH01008722;XM_005386413 XP_005386470 MODEL 39131357 protein-coding S100A9 S100 calcium binding protein A9 8910170 protein-coding LOC102003715 prolactin-like NW_004955634 57648 64392 - 102003715 AGCD01077606;XM_005415042 XP_005415099 MODEL 39131678 rrna 5S_rRNA 5S ribosomal RNA 8752348 ncrna LOC102010432 uncharacterized LOC102010432 NW_004955449 7929705 7955196 - 102010432 AGCD01042005;XR_262495 MODEL 8720440 protein-coding LOC102012491 kinesin-like protein KIF13B NW_004955802 3103 18233 - 102012491 AGCD01078376;GBDK01191507;GBDK01191509;XM_005415115 XP_005415172 MODEL 8751717 protein-coding LOC102011232 liver carboxylesterase 1-like NW_004955433 13570134 13598314 - 102011232 AGCD01031695;AGCD01031696;GBCQ01034315;XM_005388340;XM_005388341 XP_005388397;XP_005388398 MODEL 730468943 snorna SNORD45 Small nucleolar RNA SNORD45 10156106 protein-coding LOC106148544 uncharacterized LOC106148544 NW_004955423 23374521 23403227 + 106148544 AGCD01024005;GBDK01316163;XM_013514459;XM_013514460;XM_013514461;XR_001234090 XP_013369913;XP_013369914;XP_013369915 MODEL 8735288 protein-coding Duoxa2 dual oxidase maturation factor 2 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide biosynthetic process (ortholog); hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); familial thyroid dyshormonogenesis (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); cell leading edge (ortholog) NW_004955409 8266873 8270486 - 102023009 AGCD01009391;GBDI01008400;XM_005376739;XM_005376740 XP_005376796;XP_005376797 MODEL 730469504 snorna SNORA5 Small nucleolar RNA SNORA5 39133337 snrna U4 U4 spliceosomal RNA 8975820 protein-coding Dennd4c DENN domain containing 4C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); protein localization to plasma membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); insulin-responsive compartment (ortholog) NW_004955434 21640068 21740842 + 102026145 AGCD01032647;AGCD01032648;AGCD01032649;AGCD01032650;AGCD01032651;AGCD01032652;GBBH01141559;XM_005388729;XM_013516304;XM_013516305 XP_005388786;XP_013371758;XP_013371759 MODEL 39131551 protein-coding PTGES3L prostaglandin E synthase 3 like 8838103 protein-coding Wwc1 WW and C2 domain containing 1 ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cell migration (ortholog); hippo signaling (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 21362644 21529164 + 102010976 AGCD01008554;GBDJ01134962;GBDJ01134963;XM_005376298;XM_005376299 XP_005376355;XP_005376356 MODEL 10229344 pseudo LOC106147452 molybdopterin synthase catalytic subunit-like NW_004955562 1392279 1398829 - 106147452 AGCD01073977 MODEL 9054982 pseudo LOC102009285 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955487 7895732 7897622 - 102009285 AGCD01059414 MODEL 8998624 protein-coding Eef1d eukaryotic translation elongation factor 1 delta ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to ionizing radiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); fibrillar center (ortholog) NW_004955454 2284892 2299169 - 102005558 AGCD01045015;GBCQ01000760;XM_013520018;XM_013520019;XM_013520020;XM_013520021;XM_013520022;XM_013520023;XM_013520024;XM_013520025 XP_013375472;XP_013375473;XP_013375474;XP_013375475;XP_013375476;XP_013375477;XP_013375478;XP_013375479 MODEL 8989873 protein-coding Ralgds ral guanine nucleotide dissociation stimulator ENCODES a protein that exhibits GTPase regulator activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955513 2386293 2405161 - 102006939 AGCD01066878;GBCE01096266;GBDF01128189;XM_005408411 XP_005408468 MODEL 9063365 ncrna LOC102022002 uncharacterized LOC102022002 NW_004955430 21709076 21728235 - 102022002 AGCD01029774;AGCD01029775;XR_001234548 MODEL 8936663 protein-coding Chmp4b charged multivesicular body protein 4B ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); ASSOCIATED WITH cataract 31 multiple types (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955422 27482239 27526798 - 102026226 AGCD01023323;AGCD01023324;AGCD01023325;AGCD01023326;GBCB01007585;GBDK01003467;XM_005384838 XP_005384895 MODEL 39133338 snrna U4 U4 spliceosomal RNA 8820965 protein-coding LOC102006233 olfactory receptor 10J4-like NW_004955468 11106424 11107365 - 102006233 AGCD01052114;XM_005400170 XP_005400227 MODEL 8955348 protein-coding Cadm4 cell adhesion molecule 4 ENCODES a protein that exhibits protein phosphatase binding (ortholog); receptor tyrosine kinase binding (ortholog); vascular endothelial growth factor receptor 1 binding (ortholog); INVOLVED IN central nervous system myelination (ortholog); negative regulation of vascular endothelial growth factor receptor signaling pathway (ortholog); negative regulation of vascular endothelial growth factor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cell leading edge (ortholog); cell-cell contact zone (ortholog); Golgi membrane (ortholog) NW_004955555 1356143 1361404 - 102017067 AGCD01073074;GBDI01182821;XM_013508780 XP_013364234 MODEL 8840212 protein-coding Dcdc2b doublecortin domain containing 2B ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog) NW_004955452 10577746 10583087 + 102018556 AGCD01044280;GBBH01001035;XM_013519556;XM_013519557 XP_013375010;XP_013375011 MODEL 8971099 protein-coding Evi5l ecotropic viral integration site 5 like ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955563 1384694 1401107 - 102021183 AGCD01074145;AGCD01074146;GBDK01234997;XM_013509169;XM_013509170;XM_013509171;XM_013509172;XM_013509173 XP_013364623;XP_013364624;XP_013364625;XP_013364626;XP_013364627 MODEL 9050567 protein-coding Ccdc78 coiled-coil domain containing 78 INVOLVED IN de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); centronuclear myopathy (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); deuterosome (ortholog) NW_004955442 16478219 16482452 + 102017819 AGCD01037901;GBDF01222967;XM_005391612;XM_005391613;XM_013517748;XM_013517749;XM_013517750;XM_013517751;XM_013517752;XM_013517754 XP_005391669;XP_005391670;XP_013373202;XP_013373203;XP_013373204;XP_013373205;XP_013373206;XP_013373208 MODEL 8914282 ncrna LOC102018674 uncharacterized LOC102018674 NW_004955451 315679 320230 - 102018674 AGCD01042932;GBDK01028726;XR_262564 MODEL 8748780 protein-coding Ctps2 CTP synthase 2 ENCODES a protein that exhibits CTP synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN CTP biosynthetic process (ortholog); PARTICIPATES IN de novo pyrimidine biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoophidium (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) NW_004955519 1587998 1647810 + 102008448 AGCD01067900;AGCD01067901;AGCD01067902;GBCE01134676;XM_013506997;XM_013506998;XM_013506999;XM_013507000;XM_013507001 XP_013362451;XP_013362452;XP_013362453;XP_013362454;XP_013362455 MODEL 8893898 protein-coding Elf5 E74 like ETS transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN ectoderm development (ortholog); ectodermal cell fate commitment (ortholog); mammary gland epithelial cell differentiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 11751073 11779313 + 102016484 AGCD01022765;GBBH01077250;XM_005384141;XM_005384142;XM_005384143 XP_005384198;XP_005384199;XP_005384200 MODEL 39134475 misc_rna 7SK 7SK RNA 39133920 misc_rna 7SK 7SK RNA 8819676 protein-coding Tsc22d3 TSC22 domain family member 3 ENCODES a protein that exhibits MRF binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN body fluid secretion (ortholog); negative regulation of activation-induced cell death of T cells (ortholog); negative regulation of skeletal muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); hyperinsulinism (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955490 8177356 8238373 + 102017672 AGCD01060277;GBCE01115007;GBDF01157293;XM_005404695 XP_005404752 MODEL 8773973 protein-coding LOC102012894 A-kinase anchor protein 17B-like NW_004955534 648006 696921 + 102012894 AGCD01070461;AGCD01070462;AGCD01070463;AGCD01070464;AGCD01070465;AGCD01070466;AGCD01070467;GBBH01217459;XM_005410447;XM_005410448 XP_005410504;XP_005410505 MODEL 8745186 ncrna LOC102025880 uncharacterized LOC102025880 NW_004955409 24661068 24666415 + 102025880 AGCD01010093;GBDI01259143;XR_259793 MODEL 8753292 pseudo LOC102029790 pre-mRNA-splicing regulator WTAP pseudogene NW_004955437 348833 349701 - 102029790 AGCD01034125 MODEL 8711974 protein-coding Wwc2 WW and C2 domain containing 2 ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN hippo signaling (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of hippo signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955403 25482601 25602412 - 102011268 AGCD01002289;AGCD01002290;AGCD01002291;GBDK01018936;XM_013513141 XP_013368595 MODEL 8937820 ncrna LOC102024089 uncharacterized LOC102024089 NW_004955456 2073926 2095524 - 102024089 AGCD01046246;AGCD01046247;GBDF01286846;XR_262868 MODEL 8841448 protein-coding Ptgfr prostaglandin F receptor ENCODES a protein that exhibits prostaglandin F receptor activity (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); maternal process involved in female pregnancy (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Airway Obstruction (ortholog); endometriosis (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955423 14768208 14816462 - 102010499 AGCD01023777;AGCD01023778;AGCD01023779;GBCQ01179014;XM_005385183;XM_013514554;XM_013514555 XP_005385240;XP_013370008;XP_013370009 MODEL 8861544 protein-coding Shoc2 SHOC2 leucine rich repeat scaffold protein ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN cellular response to growth hormone stimulus (ortholog); negative regulation of keratinocyte differentiation (ortholog); negative regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atopic dermatitis (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955485 430493 517767 - 102012201 AGCD01058447;AGCD01058448;AGCD01058449;AGCD01058450;AGCD01058451;GBDJ01177936;XM_005403740;XM_005403743;XM_005403744;XM_013504084;XM_013504085 XP_005403797;XP_005403800;XP_005403801;XP_013359538;XP_013359539 MODEL 8924221 pseudo LOC102025155 prefoldin subunit 4-like NW_004955516 1138625 1139234 - 102025155 AGCD01067413 MODEL 9010870 protein-coding LOC102006598 olfactory receptor 5B2-like NW_004955511 3228174 3232952 - 102006598 AGCD01066450;XM_013506387 XP_013361841 MODEL 8775748 protein-coding Poglut3 protein O-glucosyltransferase 3 ENCODES a protein that exhibits EGF-domain serine glucosyltransferase activity (ortholog); EGF-domain serine xylosyltransferase activity (ortholog); UDP-glucosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog); protein O-linked glycosylation via xylose (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955412 10582169 10598153 - 102014338 AGCD01012771;GBCE01045208;GBCE01045210;XM_013511000 XP_013366454 MODEL 39131679 rrna 5S_rRNA 5S ribosomal RNA 730469087 snorna SNORD45 Small nucleolar RNA SNORD45 10382550 protein-coding LOC106148545 coiled-coil domain-containing protein 71-like NW_004955423 23373887 23374405 + 106148545 AGCD01024005;GBBH01101188;XM_013514462 XP_013369916 MODEL 8897742 protein-coding Ppil2 peptidylprolyl isomerase like 2 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); protein polyubiquitination (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 17426154 17449079 - 102014295 AGCD01037955;GBBH01166387;XM_005391698;XM_005391699;XM_013517867;XM_013517868;XM_013517869;XM_013517870;XM_013517871;XR_001235406 XP_005391755;XP_005391756;XP_013373321;XP_013373322;XP_013373323;XP_013373324;XP_013373325 MODEL 8877342 protein-coding Lrrc56 leucine rich repeat containing 56 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog) NW_004955476 11493299 11507022 - 102017010 AGCD01055460;GBBH01165706;XM_013502922 XP_013358376 MODEL 8813050 protein-coding Bbof1 basal body orientation factor 1 INVOLVED IN cilium movement involved in cell motility (ortholog); flagellated sperm motility (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN axoneme (ortholog); sperm flagellum (ortholog) NW_004955523 1363246 1405022 - 102020275 AGCD01068514;AGCD01068515;AGCD01068516;GBBH01032015;GBDF01084330;XM_005409398;XM_005409399;XM_005409400;XM_013507127 XP_005409455;XP_005409456;XP_005409457;XP_013362581 MODEL 8928878 protein-coding Slc18a1 solute carrier family 18 member A1 ENCODES a protein that exhibits enzyme binding (ortholog); monoamine:proton antiporter activity (ortholog); serotonin:sodium:chloride symporter activity (ortholog); INVOLVED IN cellular response to lithium ion (ortholog); dopamine uptake (ortholog); negative regulation of serotonin uptake (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); ovarian cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); secretory granule membrane (ortholog); synapse (ortholog) NW_004955403 43821978 43848403 - 102024521 AGCD01002789;GBDJ01219652;XM_005373626;XM_013513636;XM_013513637 XP_005373683;XP_013369090;XP_013369091 MODEL 8953517 protein-coding Cops5 COP9 signalosome subunit 5 ENCODES a protein that exhibits enzyme binding (ortholog); macrophage migration inhibitory factor binding (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN exosomal secretion (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955444 12217337 12233570 + 102008673 AGCD01039063;AGCD01039064;GBDF01003538;XM_005392123;XM_005392125 XP_005392180;XP_005392182 MODEL 39133921 misc_rna 7SK 7SK RNA 8986103 protein-coding Fos Fos proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hormone stimulus (ortholog); PARTICIPATES IN endothelin signaling pathway; fibroblast growth factor signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute myocardial infarction (ortholog); alcohol dependence (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nuclear matrix (ortholog) NW_004955523 307181 310728 - 102010620 AGCD01068444;AGCD01068445;GBBH01092783;XM_005409369 XP_005409426 MODEL 8950630 ncrna LOC102005172 uncharacterized LOC102005172 NW_004955436 16334399 16358588 + 102005172 AGCD01033914;AGCD01033915;GBDK01148627;XR_001234980 MODEL 8727339 protein-coding Qrsl1 glutaminyl-tRNA amidotransferase subunit QRSL1 ENCODES a protein that exhibits glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) NW_004955411 31950727 31981522 + 102006992 AGCD01012289;AGCD01012290;GBDF01157003;XM_005377831 XP_005377888 MODEL 8897014 pseudo LOC102003718 N-alpha-acetyltransferase 50 pseudogene NW_004955988 4743 5256 + 102003718 AGCD01078815 MODEL 8823551 protein-coding Rgcc regulator of cell cycle ENCODES a protein that exhibits kinase activator activity (ortholog); protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); complement receptor mediated signaling pathway (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Myocardial Ischemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955518 4788857 4800273 - 102024839 AGCD01067838;GBBH01089561;XM_005409116 XP_005409173 MODEL 39132278 rrna 5S_rRNA 5S ribosomal RNA 8948445 pseudo LOC102025882 prefoldin subunit 6 pseudogene NW_004955462 4270597 4271256 + 102025882 AGCD01049218;XM_005398149 MODEL 8766703 protein-coding Arih1 ariadne RBR E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955450 4683118 4737793 - 102029925 AGCD01042474;AGCD01042475;GBBH01007354;GBCB01005936;XM_013518906 XP_013374360 MODEL 8982458 pseudo LOC102012495 quinone oxidoreductase pseudogene NW_004955405 19872 21878 + 102012495 AGCD01004551 MODEL 8819606 protein-coding LOC102011234 40S ribosomal protein S17-like NW_004955523 399503 400042 - 102011234 AGCD01068454;GBDJ01263809;XM_013507145 XP_013362599 MODEL 8823121 pseudo LOC102003373 bile acid receptor-like NW_004955435 18126734 18135541 + 102003373 AGCD01033389;AGCD01033390 MODEL 9052351 ncrna LOC102025165 uncharacterized LOC102025165 NW_004955532 1964848 1970998 + 102025165 AGCD01070208;GBBH01020719;XR_001232022;XR_264720 MODEL 9034186 protein-coding Insig2 insulin induced gene 2 ENCODES a protein that exhibits oxysterol binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cholesterol biosynthetic process (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); SREBP-SCAP-Insig complex (ortholog) NW_004955459 11571582 11596069 - 102025440 AGCD01048233;GBDF01213828;XM_005397686;XM_005397687;XM_013521090 XP_005397743;XP_005397744;XP_013376544 MODEL 8798707 protein-coding Dus1l dihydrouridine synthase 1 like ENCODES a protein that exhibits tRNA-dihydrouridine16 synthase activity (ortholog); tRNA-dihydrouridine17 synthase activity (ortholog); INVOLVED IN tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955506 1097255 1104918 + 102015747 AGCD01065245;GBDF01153424;XM_005407216;XM_005407217;XM_005407218;XM_005407219 XP_005407273;XP_005407274;XP_005407275;XP_005407276 MODEL 39134476 misc_rna 7SK 7SK RNA 9035656 protein-coding Taf13 TATA-box binding protein associated factor 13 ENCODES a protein that exhibits DNA binding (ortholog); TBP-class protein binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 60 (ortholog); autosomal recessive primary microcephaly (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955435 12488578 12496894 - 102023068 AGCD01033149;GBBH01069822;XM_005388844 XP_005388901 MODEL 8926503 protein-coding Dennd5a DENN domain containing 5A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); body dysmorphic disorder (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); retromer complex (ortholog) NW_004955414 24861950 24955031 - 102027063 AGCD01015559;AGCD01015560;AGCD01015561;AGCD01015562;AGCD01015563;GBDF01050600;XM_005380255 XP_005380312 MODEL 8772045 protein-coding Tsc22d4 TSC22 domain family member 4 INVOLVED IN glucose homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron cellular homeostasis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); nucleus (ortholog) NW_004955573 414984 425480 + 102023089 AGCD01074976;AGCD01074977;GBDK01081440;XM_005413727;XM_013509480 XP_005413784;XP_013364934 MODEL 8748513 protein-coding Chmp4c charged multivesicular body protein 4C ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Ovarian Neoplasms (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); Flemming body (ortholog) NW_004955417 96674 135601 + 102025003 AGCD01017786;AGCD01017787;GBBH01047695;XM_005381721 XP_005381778 MODEL 39133339 snrna U4 U4 spliceosomal RNA 8854842 protein-coding S100b S100 calcium binding protein B ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); astrocyte differentiation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955407 42972584 42980510 - 102021420 AGCD01007902;GBDI01019684;XM_005375939 XP_005375996 MODEL 9027641 protein-coding Ralgps1 Ral GEF with PH domain and SH3 binding motif 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of Ral protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955419 1334627 1593828 - 102007341 AGCD01019647;AGCD01019648;AGCD01019649;AGCD01019650;AGCD01019651;GBDJ01260608;XM_005382439;XM_005382440;XM_005382441;XM_005382442;XM_005382443;XM_005382444;XM_005382445;XM_005382446;XM_013513184;XM_013513185 XP_005382496;XP_005382497;XP_005382498;XP_005382499;XP_005382500;XP_005382501;XP_005382502;XP_005382503;XP_013368638;XP_013368639 MODEL 8787657 protein-coding Timcc TIM double twin CX3C motif chaperone ASSOCIATED WITH Breast Cancer, Familial (ortholog); Meniere's disease (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955424 14837264 14841354 + 102005819 AGCD01024660;GBBH01228913;XM_005385615 XP_005385672 MODEL 8876489 protein-coding LOC102010434 small proline-rich protein 3-like NW_004955592 374906 377181 - 102010434 AGCD01076311;GBDI01016407;XM_005414613;XM_005414614 XP_005414670;XP_005414671 MODEL 8781168 protein-coding Evl Enah/Vasp-like ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); cellular response to type II interferon (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) NW_004955438 21198761 21298657 + 102004644 AGCD01035530;AGCD01035531;AGCD01035532;GBDK01078332;XM_005390426;XM_005390427;XM_005390428 XP_005390483;XP_005390484;XP_005390485 MODEL 9046023 pseudo LOC102012900 probable G-protein coupled receptor 160 NW_004955440 2492344 2496582 - 102012900 AGCD01036208 MODEL 9022507 protein-coding Cadps calcium dependent secretion activator ENCODES a protein that exhibits calcium ion binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); protein kinase binding (ortholog); INVOLVED IN catecholamine secretion (ortholog); neuronal dense core vesicle exocytosis (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); dense core granule (ortholog) NW_004955517 2965471 3420183 + 102025038 AGCD01067644;AGCD01067645;AGCD01067646;AGCD01067647;AGCD01067648;AGCD01067649;AGCD01067650;AGCD01067651;GBDF01239763;XM_013506934 XP_013362388 MODEL 8843474 pseudo LOC102024094 coiled-coil domain-containing protein 152 pseudogene NW_004955458 3065969 3066651 + 102024094 AGCD01047269 MODEL 8734376 protein-coding Dcdc2c doublecortin domain containing 2C FOUND IN cytoplasm (ortholog); sperm end piece (ortholog); sperm flagellum (ortholog) NW_004955487 3698708 3756669 - 102016276 AGCD01059292;AGCD01059293;GBDF01051361;XM_005404368;XM_013504342;XM_013504343;XR_001231153;XR_001231154 XP_005404425;XP_013359796;XP_013359797 MODEL 8817216 pseudo LOC102006599 protein kinase C iota type-like NW_004955430 12745518 12748115 - 102006599 AGCD01029509;AGCD01029510 MODEL 8796034 protein-coding Shox SHOX homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955499 716476 725455 + 102005614 AGCD01063271;GBCB01029721;XM_005406505 XP_005406562 MODEL 8877567 protein-coding Ccdc8 coiled-coil domain containing 8 subunit of 3M complex INVOLVED IN microtubule cytoskeleton organization (ortholog); regulation of mitotic nuclear division (ortholog); ASSOCIATED WITH genetic disease (ortholog); Three M Syndrome 3 (ortholog); FOUND IN 3M complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955574 551582 553829 - 102027024 AGCD01075110;GBBH01197963;XM_005413833 XP_005413890 MODEL 8983611 ncrna LOC102003724 uncharacterized LOC102003724 NW_004955452 17445620 17459241 - 102003724 AGCD01044554;AGCD01044555;GBDI01162489;XR_262704 MODEL 8904982 pseudo LOC102007740 39S ribosomal protein L47, mitochondrial pseudogene NW_004955459 7511838 7512274 + 102007740 AGCD01048113 MODEL 8920872 ncrna LOC102012499 uncharacterized LOC102012499 NW_004955407 30651094 30671049 - 102012499 AGCD01007639;GBDJ01066236;XR_001231688;XR_259595 MODEL 8882175 protein-coding Pogz pogo transposable element derived with ZNF domain INVOLVED IN double-strand break repair via homologous recombination (ortholog); kinetochore assembly (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH anemia (ortholog); anisometropia (ortholog); anxiety disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955589 920729 975242 + 102020969 AGCD01076184;AGCD01076185;GBCE01188432;XM_005414572;XM_005414573;XM_013509945;XM_013509946;XM_013509947;XM_013509948 XP_005414629;XP_005414630;XP_013365399;XP_013365400;XP_013365401;XP_013365402 MODEL 10353084 protein-coding LOC106147453 serine/arginine repetitive matrix protein 1-like NW_004955408 21361836 21362295 - 106147453 AGCD01008553;GBCQ01030344;XM_013509124 XP_013364578 MODEL 8764683 protein-coding Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); progeria (ortholog); stomach cancer (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955465 5878055 5895232 + 102025223 AGCD01050433;GBDF01126485;XM_005398844;XM_005398845;XR_001236757;XR_263242 XP_005398901;XP_005398902 MODEL 39134477 misc_rna 7SK 7SK RNA 8874445 protein-coding Wwc3 WWC family member 3 ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN hippo signaling (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of hippo signaling (ortholog); ASSOCIATED WITH Arachnodactyly (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955544 3012602 3126518 - 102008666 AGCD01071747;AGCD01071748;GBCE01023937;GBCQ01101676;XM_005411401 XP_005411458 MODEL 8789620 protein-coding Tsen15 tRNA splicing endonuclease subunit 15 INVOLVED IN tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Developmental Disabilities (ortholog); FOUND IN tRNA-intron endonuclease complex (ortholog) NW_004955406 22787090 22806231 + 102029824 AGCD01006161;GBDK01323609;XM_005375050 XP_005375107 MODEL 39132794 snorna SNORA50 Small nucleolar RNA SNORA50 39132280 rrna 5S_rRNA 5S ribosomal RNA 8710056 protein-coding LOC102018675 uncharacterized LOC102018675 NW_004955622 83258 210783 - 102018675 AGCD01077384;AGCD01077385;AGCD01077386;AGCD01077387;AGCD01077388;AGCD01077389;AGCD01077390;AGCD01077391;AGCD01077392;AGCD01077393;AGCD01077394;AGCD01077395;XM_013510157 XP_013365611 MODEL 8837161 protein-coding Ralgps2 Ral GEF with PH domain and SH3 binding motif 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 18161587 18267737 + 102026072 AGCD01006023;AGCD01006024;AGCD01006025;GBDK01430642;GBDK01430645;XM_005374939 XP_005374996 MODEL 8959292 pseudo LOC102009287 E3 SUMO-protein ligase PIAS2-like NW_004955421 24211084 24213430 - 102009287 AGCD01022209 MODEL 626189160 snorna SNORD46 Small nucleolar RNA SNORD46 10291173 ncrna LOC106148546 uncharacterized LOC106148546 NW_004955423 23415041 23425810 + 106148546 AGCD01024005;GBDJ01371968;XR_001234091 MODEL 8699530 pseudo LOC102003375 mortality factor 4-like protein 1 pseudogene NW_004955532 142317 143401 + 102003375 AGCD01070101 MODEL 8709091 protein-coding LOC102006234 apolipoprotein L2-like NW_004955413 22477358 22499340 - 102006234 AGCD01014302;GBDK01079420;XM_005379648 XP_005379705 MODEL 8855738 protein-coding LOC102025166 HLA class II histocompatibility antigen, DO alpha chain ENCODES a protein that exhibits MHC class II protein complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); negative regulation of antigen processing and presentation of peptide antigen via MHC class II (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN MHC class II protein complex (ortholog) NW_004955437 1603395 1606800 - 102025166 AGCD01034219;GBDI01009349;XM_005389464;XM_005389465;XM_013516976;XM_013516977 XP_005389521;XP_005389522;XP_013372430;XP_013372431 MODEL 8751103 protein-coding Bbox1 gamma-butyrobetaine hydroxylase 1 ENCODES a protein that exhibits gamma-butyrobetaine dioxygenase activity (ortholog); identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN carnitine biosynthetic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955476 6368842 6433797 + 102015106 AGCD01055330;AGCD01055331;GBBH01127279;XM_005401746;XM_005401747;XM_013502996 XP_005401803;XP_005401804;XP_013358450 MODEL 8727192 protein-coding Ppil3 peptidylprolyl isomerase like 3 PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog) NW_004955403 640956 648498 + 102029462 AGCD01001700;GBCQ01038792;XM_005373232;XM_005373233;XM_005373234;XM_005373235 XP_005373289;XP_005373290;XP_005373291;XP_005373292 MODEL 8831882 protein-coding Slc18a2 solute carrier family 18 member A2 ENCODES a protein that exhibits amine transmembrane transporter activity (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); cellular response to ammonium ion (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN dopamine biosynthetic pathway; epinephrine biosynthetic pathway; norepinephrine biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell body (ortholog) NW_004955431 21949553 21979679 + 102028670 AGCD01030506;AGCD01030507;GBBH01203229;XM_005387871;XM_005387872;XM_013515846 XP_005387928;XP_005387929;XP_013371300 MODEL 8941081 protein-coding LOC102022006 putative histone-lysine N-methyltransferase PRDM6 NW_004955521 1207144 1292667 + 102022006 AGCD01068179;GBDF01076337;GBDK01358422;XM_013507093 XP_013362547 MODEL 8952571 protein-coding Cops6 COP9 signalosome subunit 6 INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955573 770271 775222 - 102028245 AGCD01075004;GBBH01035107;XM_005413743;XM_005413744 XP_005413800;XP_005413801 MODEL 8756076 protein-coding LOC102005515 zinc finger protein 350 NW_004955558 546358 562360 + 102005515 AGCD01073376;GBBH01131689;XM_005412662;XM_005412664;XM_005412665;XM_005412666;XM_005412667;XM_005412668;XM_013508866;XM_013508867 XP_005412719;XP_005412721;XP_005412722;XP_005412723;XP_005412724;XP_005412725;XP_013364320;XP_013364321 MODEL 8731281 protein-coding LOC102029797 zinc finger protein 33B-like NW_004955546 898463 940129 - 102029797 AGCD01072032;AGCD01072033;GBCQ01058191;XM_013508383;XM_013508384;XM_013508385;XM_013508386 XP_013363837;XP_013363838;XP_013363839;XP_013363840 MODEL 8963878 protein-coding LOC102005173 trace amine-associated receptor 2 NW_004955436 13191916 13192815 - 102005173 AGCD01033855;XM_005415330 XP_005415387 MODEL 39133230 snrna U4 U4 spliceosomal RNA 39131680 rrna 5S_rRNA 5S ribosomal RNA 8960421 protein-coding S100g S100 calcium binding protein G PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH gestational diabetes (ortholog); pre-eclampsia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955519 1623695 1625164 - 102008138 AGCD01067902;XM_005409148;XM_013507002 XP_005409205;XP_013362456 MODEL 8833038 protein-coding LOC102012901 general transcription factor 3C polypeptide 6-like NW_004955441 6322077 6323436 - 102012901 AGCD01036912;XM_013517515 XP_013372969 MODEL 8735700 protein-coding Ctr9 CTR9 component of Paf1/RNA polymerase II complex ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN blastocyst growth (ortholog); blastocyst hatching (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) NW_004955414 26347508 26373726 + 102008715 AGCD01015641;GBDF01125431;XM_005380285 XP_005380342 MODEL 8726577 protein-coding Arih2 ariadne RBR E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN hematopoietic stem cell proliferation (ortholog); positive regulation of protein localization to mitochondrion (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955532 933749 1008619 + 102004200 AGCD01070159;AGCD01070160;GBDF01043720;XM_005410170;XM_013507578 XP_005410227;XP_013363032 MODEL 730469389 snorna SNORA50 Small nucleolar RNA SNORA50 8910885 protein-coding Shox2 SHOX homeobox 2 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac pacemaker cell differentiation (ortholog); cardiac right atrium morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cholangiocarcinoma (ortholog); cleft palate (ortholog) NW_004955448 8937656 8947890 - 102024863 AGCD01041456;GBBH01225102;XM_005393094;XM_005393095 XP_005393151;XP_005393152 MODEL 9034568 protein-coding Dchs1 dachsous cadherin-related 1 INVOLVED IN anatomical structure morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); cervical cancer (ortholog); FOUND IN apical part of cell (ortholog) NW_004955414 22331590 22365761 - 102011111 AGCD01015453;AGCD01015454;AGCD01015455;GBBH01172650;GBCB01010159;XM_013512060;XM_013512061 XP_013367514;XP_013367515 MODEL 8889058 protein-coding Insl3 insulin like 3 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); hormone activity (ortholog); protease binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled serotonin receptor signaling pathway (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); cryptorchidism (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955524 3413764 3415691 + 102015440 AGCD01068896;GBDF01010966;XM_005409546 XP_005409603 MODEL 9053164 protein-coding Lrrc57 leucine rich repeat containing 57 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955416 9230362 9237799 - 102024005 AGCD01017080;AGCD01017081;GBDK01124064;XM_005381347;XM_005381348;XM_005381349 XP_005381404;XP_005381405;XP_005381406 MODEL 39133922 misc_rna 7SK 7SK RNA 8811939 protein-coding Dus2 dihydrouridine synthase 2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); FMN binding (ortholog); NADPH binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); tRNA dihydrouridine synthesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955484 8564015 8609987 - 102011008 AGCD01058393;GBDJ01422933;XM_005403588;XM_013503874;XM_013503875;XM_013503876;XM_013503877;XM_013503878 XP_005403645;XP_013359328;XP_013359329;XP_013359330;XP_013359331;XP_013359332 MODEL 8964548 pseudo LOC102003378 S-phase kinase-associated protein 1 pseudogene NW_004955537 3218460 3219427 - 102003378 AGCD01070953 MODEL 9050634 protein-coding Taf15 TATA-box binding protein associated factor 15 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN gene expression (ortholog); mRNA stabilization (ortholog); RNA splicing (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955481 10242839 10274961 + 102021127 AGCD01057138;GBDF01080958;XM_005402892;XM_013503452 XP_005402949;XP_013358906 MODEL 8917357 protein-coding Ptgfrn prostaglandin F2 receptor inhibitor INVOLVED IN lipid droplet organization (ortholog); myoblast fusion involved in skeletal muscle regeneration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955435 20046712 20092051 + 102004001 AGCD01033445;GBDJ01272892;XM_005389111 XP_005389168 MODEL 39131358 protein-coding CHMP5 charged multivesicular body protein 5 10297441 protein-coding Dennd5b DENN domain containing 5B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of triglyceride transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aphasia (ortholog); asthma (ortholog) NW_004955505 4134686 4295112 + 106146927 AGCD01065092;AGCD01065093;AGCD01065094;AGCD01065095;AGCD01065096;GBDF01118818;XM_013505934 XP_013361388 MODEL 8769766 protein-coding Fosb FosB proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to calcium ion (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955555 2438864 2445846 + 102013347 AGCD01073154;GBDF01189117;XM_005412526;XM_013508712 XP_005412583;XP_013364166 MODEL 9002678 protein-coding Qser1 glutamine and serine rich 1 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromosome (ortholog) NW_004955422 13207000 13287585 - 102025916 AGCD01022815;AGCD01022816;AGCD01022817;GBCE01001035;GBDF01236338;XM_005384170 XP_005384227 MODEL 39134478 misc_rna 7SK 7SK RNA 9065200 protein-coding Timd4 T cell immunoglobulin and mucin domain containing 4 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); ASSOCIATED WITH alveolar echinococcosis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955408 10969413 10998042 - 102019476 AGCD01008280;AGCD01008281;AGCD01008282;GBBH01126834;XM_013506889;XM_013506895;XM_013506900 XP_013362343;XP_013362349;XP_013362354 MODEL 8726199 ncrna LOC102011238 uncharacterized LOC102011238 NW_004955435 16675032 16735309 - 102011238 AGCD01033336;AGCD01033337;GBDF01045771;XR_001234857;XR_001234858;XR_261711;XR_261713 MODEL 8854107 protein-coding Rgl1 ral guanine nucleotide dissociation stimulator like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955406 22419137 22670537 + 102027940 AGCD01006158;AGCD01006159;AGCD01006160;GBDF01090295;XM_005375043;XM_005375044;XM_005375045;XM_005375046 XP_005375100;XP_005375101;XP_005375102;XP_005375103 MODEL 8946871 protein-coding Evpl envoplakin INVOLVED IN keratinocyte differentiation (ortholog); regulation of antibacterial peptide production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cornified envelope (ortholog); cytosol (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955506 6227488 6246339 + 102007355 AGCD01065403;AGCD01065404;GBDK01022181;XM_005407464 XP_005407521 MODEL 8824667 protein-coding Cadps2 calcium dependent secretion activator 2 INVOLVED IN cellular response to starvation (ortholog); hematopoietic stem cell homeostasis (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955479 3961877 4485710 - 102011765 AGCD01056313;AGCD01056314;AGCD01056315;AGCD01056316;AGCD01056317;AGCD01056318;AGCD01056319;AGCD01056320;AGCD01056321;AGCD01056322;AGCD01056323;GBBH01051665;GBBH01051672;XM_013503273 XP_013358727 MODEL 39132283 rrna 5S_rRNA 5S ribosomal RNA 9038514 protein-coding Tsen2 tRNA splicing endonuclease subunit 2 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); tRNA-intron endonuclease complex (ortholog) NW_004955429 14970105 14997459 + 102018956 AGCD01028787;AGCD01028788;GBDK01001142;XM_005387020;XM_005387021;XM_013515519;XR_001234537;XR_261333 XP_005387077;XP_005387078;XP_013370973 MODEL 8727392 protein-coding LOC102007742 probable C-mannosyltransferase DPY19L2 NW_004955460 7871421 7960495 + 102007742 AGCD01048500;AGCD01048501;AGCD01048502;AGCD01048503;AGCD01048504;AGCD01048505;AGCD01048506;AGCD01048507;AGCD01048508;GBDF01196111;XM_013521290;XM_013521291;XM_013521292 XP_013376744;XP_013376745;XP_013376746 MODEL 8923475 protein-coding Eef1g eukaryotic translation elongation factor 1 gamma INVOLVED IN response to virus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955599 607021 615662 + 102016438 AGCD01076661;GBDF01002505;XM_005414794 XP_005414851 MODEL 8761762 protein-coding Pola1 DNA polymerase alpha 1, catalytic subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA polymerase activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); DNA replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); bone marrow disease (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog); chromatin (ortholog); cytosol (ortholog) NW_004955509 5007385 5319683 + 102020470 AGCD01066094;AGCD01066095;AGCD01066096;AGCD01066097;AGCD01066098;AGCD01066099;AGCD01066100;GBBH01097790;XM_005407854;XM_013506296 XP_005407911;XP_013361750 MODEL 9038956 pseudo LOC102010436 centromere protein L-like NW_004955402 50936205 51007657 + 102010436 AGCD01001288;AGCD01001289 MODEL 8918067 protein-coding Bbs1 Bardet-Biedl syndrome 1 ENCODES a protein that exhibits patched binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); brain morphogenesis (ortholog); cartilage development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); centrosome (ortholog) NW_004955422 18825756 18843820 - 102009193 AGCD01022962;AGCD01022963;AGCD01022964;GBDF01048179;XM_005384395 XP_005384452 MODEL 8954010 ncrna LOC102025894 uncharacterized LOC102025894 NW_004955413 11432189 11457574 + 102025894 AGCD01013962;GBCB01074027;XR_001232974;XR_001232975 MODEL 8913661 protein-coding LOC102022008 histone H3.3-like NW_004955435 12425986 12426994 + 102022008 AGCD01033147;GBDK01387908;XM_005388840 XP_005388897 MODEL 9059663 protein-coding Wwox WW domain containing oxidoreductase ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amelogenesis imperfecta type 1H (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955522 1265732 2185372 + 102026035 AGCD01068359;AGCD01068360;AGCD01068361;AGCD01068362;AGCD01068363;AGCD01068364;AGCD01068365;GBDF01158326;GBDF01158329;XM_013507098 XP_013362552 MODEL 8992758 protein-coding Elfn1 extracellular leucine rich repeat and fibronectin type III domain containing 1 INVOLVED IN chemical synaptic transmission (ortholog); establishment of protein localization (ortholog); synapse assembly (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Dursun-Ozgul neurodevelopmental syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); dendrite (ortholog) NW_004955460 9250522 9305895 + 102021212 AGCD01048542;AGCD01048543;GBDJ01337944;XM_005397815;XM_005397816;XM_013521103 XP_005397872;XP_005397873;XP_013376557 MODEL 8913820 ncrna LOC102003727 uncharacterized LOC102003727 NW_004955453 14568514 14584297 - 102003727 AGCD01044871;GBDF01078382;XR_262740 MODEL 8849203 protein-coding Taf1a TATA-box binding protein associated factor, RNA polymerase I subunit A INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN RNA polymerase transcription factor SL1 complex (ortholog) NW_004955520 1900802 1921350 + 102018636 AGCD01068068;AGCD01068069;GBBH01006250;XM_005409257;XM_005409258;XM_013507028;XM_013507029;XM_013507031 XP_005409314;XP_005409315;XP_013362482;XP_013362483;XP_013362485 MODEL 9019318 protein-coding LOC102006600 ATP-binding cassette sub-family G member 2-like NW_004955433 125610 276438 + 102006600 AGCD01031303;AGCD01031304;AGCD01031305;AGCD01031306;AGCD01031307;AGCD01031308;AGCD01031309;AGCD01031310;AGCD01031311;GBCE01134192;XM_013516145;XM_013516146;XM_013516147;XM_013516148;XM_013516149;XM_013516150;XM_013516151;XM_013516152;XM_013516153;XM_013516154;XM_013516155;XM_013516156;XM_013516157;XM_013516158;XM_013516159;XM_013516160;XM_013516161;XM_013516162;XR_001234729;XR_001234730;XR_001234731;XR_001234732 XP_013371599;XP_013371600;XP_013371601;XP_013371602;XP_013371603;XP_013371604;XP_013371605;XP_013371606;XP_013371607;XP_013371608;XP_013371609;XP_013371610;XP_013371611;XP_013371612;XP_013371613;XP_013371614;XP_013371615;XP_013371616 MODEL 8707225 pseudo LOC102012902 E3 ubiquitin-protein ligase RNF13-like NW_004955550 44557 45787 + 102012902 AGCD01072481 MODEL 8824923 protein-coding S100p S100 calcium binding protein P ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endothelial cell migration (ortholog); ASSOCIATED WITH Mouth Neoplasms (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955514 3704002 3707098 - 102019423 AGCD01067107;AGCD01067108;GBDF01193973;GBDJ01017243;XM_005408812 XP_005408869 MODEL 8801185 ncrna LOC102009289 uncharacterized LOC102009289 NW_004955422 20690361 20700604 - 102009289 AGCD01023085;AGCD01023086;GBCB01050340;XR_260904 MODEL 8840774 protein-coding LOC102012500 uncharacterized LOC102012500 NW_004955456 6824286 6831920 + 102012500 AGCD01046378;GBDF01048469;XM_013520512;XR_001236319;XR_001236320 XP_013375966 MODEL 8964662 protein-coding LOC102006239 olfactory receptor 51J1-like NW_004955414 21313687 21314640 + 102006239 AGCD01015412;XM_005380495 XP_005380552 MODEL 9068247 pseudo LOC102025167 THUMP domain-containing protein 3 pseudogene NW_004955534 1630167 1631771 - 102025167 AGCD01070504 MODEL 10201634 protein-coding LOC106147454 olfactory receptor 7G3-like NW_004955563 330116 331045 - 106147454 AGCD01074061;XM_013509123 XP_013364577 MODEL 39133923 misc_rna 7SK 7SK RNA 8726752 protein-coding Ppil4 peptidylprolyl isomerase like 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955439 11705096 11745478 + 102012687 AGCD01035919;AGCD01035920;AGCD01035921;AGCD01035922;GBDF01189460;XM_005390608 XP_005390665 MODEL 8804758 protein-coding LOC102029801 vomeronasal type-1 receptor 4-like NW_004955558 534070 534984 - 102029801 AGCD01073376;XM_005412738 XP_005412795 MODEL 8786033 protein-coding Cops7a COP9 signalosome subunit 7A INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Disease Progression (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955413 4337117 4343640 + 102027284 AGCD01013609;GBCQ01034243;XM_005378818;XM_005378819;XM_005378820;XM_005378821;XM_005378822;XM_013511342 XP_005378875;XP_005378876;XP_005378877;XP_005378878;XP_005378879;XP_013366796 MODEL 8912743 ncrna LOC102007747 uncharacterized LOC102007747 NW_004955462 12097970 12113964 + 102007747 AGCD01049397;GBDF01234407;XR_263131 MODEL 8841114 protein-coding Dus3l dihydrouridine synthase 3 like ENCODES a protein that exhibits mRNA dihydrouridine synthase activity (ortholog); tRNA-dihydrouridine47 synthase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955495 3653613 3660331 + 102022937 AGCD01061874;GBBH01166430;XM_005405754;XM_005405755;XM_005405756;XM_005405757;XM_005405758;XM_013505195 XP_005405811;XP_005405812;XP_005405813;XP_005405814;XP_005405815;XP_013360649 MODEL 8784131 ncrna LOC102005180 uncharacterized LOC102005180 NW_004955540 2515392 2519809 + 102005180 AGCD01071321;GBDF01244999;XR_264826 MODEL 39133232 snrna U4 U4 spliceosomal RNA 39131681 rrna 5S_rRNA 5S ribosomal RNA 8920953 protein-coding Eef2 eukaryotic translation elongation factor 2 ENCODES a protein that exhibits 5S rRNA binding (ortholog); actin filament binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); glial cell proliferation (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; translation elongation pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955495 4800103 4807714 + 102015327 AGCD01061951;GBDF01004729;XM_005405819 XP_005405876 MODEL 8883071 protein-coding Dennd6a DENN domain containing 6A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of cell-cell adhesion mediated by cadherin (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); recycling endosome (ortholog) NW_004955430 7327602 7396961 - 102015751 AGCD01029348;AGCD01029349;GBDJ01008907;XM_005387413;XM_013515601;XM_013515602;XM_013515603 XP_005387470;XP_013371055;XP_013371056;XP_013371057 MODEL 730469462 snorna SNORD47 Small nucleolar RNA SNORD47 10086793 ncrna LOC106148547 uncharacterized LOC106148547 NW_004955403 52251486 52258343 + 106148547 AGCD01003003;GBDF01066030;XR_001234095;XR_001234096 MODEL 8993531 protein-coding Ctrc chymotrypsin C ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); proteolysis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic pancreatitis (ortholog); colorectal cancer (ortholog) NW_004955527 2714001 2719598 - 102013445 AGCD01069464;GBCQ01015982;XM_005409874 XP_005409931 MODEL 8837143 protein-coding Raly RALY heterogeneous nuclear ribonucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 27269167 27360224 - 102025699 AGCD01023317;AGCD01023318;AGCD01023319;GBCQ01050320;XM_005384836;XM_005384837;XM_013514160;XM_013514161;XM_013514162 XP_005384893;XP_005384894;XP_013369614;XP_013369615;XP_013369616 MODEL 8743533 protein-coding Evx1 even-skipped homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryo development ending in birth or egg hatching (ortholog); interneuron migration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN axon (ortholog); cell body (ortholog) NW_004955410 28939416 28942751 + 102007748 AGCD01011267;XM_005377464 XP_005377521 MODEL 39132286 rrna 5S_rRNA 5S ribosomal RNA 8754321 protein-coding Shpk sedoheptulokinase ENCODES a protein that exhibits sedoheptulokinase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); cellular response to interleukin-13 (ortholog); cellular response to interleukin-4 (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); SEDOHEPTULOKINASE DEFICIENCY (ortholog); FOUND IN cytoplasm (ortholog) NW_004955467 13169072 13209585 + 102020549 AGCD01051667;AGCD01051668;GBCQ01123966;XM_005399716;XM_005399717 XP_005399773;XP_005399774 MODEL 8878988 protein-coding Lrrc58 leucine rich repeat containing 58 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of taurine biosynthetic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) NW_004955427 19896034 19911233 - 102022947 AGCD01027388;GBBH01024743;XM_005386619 XP_005386676 MODEL 8917228 protein-coding Slc18a3 solute carrier family 18 member A3 ENCODES a protein that exhibits acetylcholine transmembrane transporter activity (ortholog); acetylcholine:proton antiporter activity (ortholog); monoamine:proton antiporter activity (ortholog); INVOLVED IN acetylcholine transport (ortholog); acetylcholine uptake (ortholog); neurotransmitter loading into synaptic vesicle (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); Binge Drinking (ortholog); FOUND IN perikaryon; AP-1 adaptor complex (ortholog); AP-2 adaptor complex (ortholog) NW_004955556 696779 698869 - 102029334 AGCD01073179;XM_005412568 XP_005412625 MODEL 9054138 protein-coding LOC102005516 uncharacterized LOC102005516 NW_004955442 7211768 7238684 + 102005516 AGCD01037621;XM_013517646 XP_013373100 MODEL 8795416 protein-coding Dchs2 dachsous cadherin-related 2 INVOLVED IN condensed mesenchymal cell proliferation (ortholog); nephron development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog) NW_004955471 8485532 8707033 - 102007329 AGCD01053187;AGCD01053188;AGCD01053189;AGCD01053190;AGCD01053191;GBCE01061980;XM_005400929 XP_005400986 MODEL 8772446 ncrna LOC102024095 uncharacterized LOC102024095 NW_004955460 10079307 10081202 + 102024095 AGCD01048572;GBDF01161695;XR_263045 MODEL 9049702 protein-coding LOC102012903 CMRF35-like molecule 4 NW_004955553 1487167 1496439 - 102012903 AGCD01072886;GBCE01119428;XM_005412249;XM_005412250 XP_005412306;XP_005412307 MODEL 39134479 misc_rna 7SK 7SK RNA 8720735 protein-coding Ccdc80 coiled-coil domain containing 80 ENCODES a protein that exhibits fibronectin binding (ortholog); glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); response to bacterium (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colorectal cancer (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); interstitial matrix (ortholog) NW_004955427 12945230 12975020 - 102028661 AGCD01027230;GBCE01076690;XM_005386391 XP_005386448 MODEL 8764475 protein-coding Chmp6 charged multivesicular body protein 6 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); late endosome to lysosome transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); endosome membrane (ortholog) NW_004955506 1987710 1994731 - 102016177 AGCD01065286;AGCD01065287;GBCB01022811;XM_005407316 XP_005407373 MODEL 8804393 protein-coding LOC102018676 protein SPACA7-like NW_004955404 1903444 1922226 + 102018676 AGCD01003236;AGCD01003237;GBDF01001013;XM_005373996;XM_013515729 XP_005374053;XP_013371183 MODEL 8927828 protein-coding Ptgir prostaglandin I2 receptor INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of platelet-derived growth factor receptor signaling pathway (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin I2 signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); atrial fibrillation (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955574 686156 690126 - 102028353 AGCD01075122;GBDK01305224;XM_005413837;XM_005413838;XM_013509573 XP_005413894;XP_005413895;XP_013365027 MODEL 9064842 ncrna LOC102022010 uncharacterized LOC102022010 NW_004955437 1401348 1411809 + 102022010 AGCD01034205;GBDF01291022;XR_001235001;XR_001235002;XR_001235003 MODEL 730469170 snorna SNORA51 Small nucleolar RNA SNORA51 8846363 protein-coding Timeless timeless circadian regulator ENCODES a protein that exhibits enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cell cycle phase transition (ortholog); ASSOCIATED WITH advanced sleep phase syndrome 4 (ortholog); alcohol use disorder (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955458 3999143 4029523 - 102009354 AGCD01047360;AGCD01047361;AGCD01047362;GBDF01162534;XM_005397313;XM_013521023 XP_005397370;XP_013376477 MODEL 8967189 protein-coding Rgl2 ral guanine nucleotide dissociation stimulator like 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of Ral protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog) NW_004955437 1851005 1857567 - 102003279 AGCD01034239;GBBH01030712;XM_005389484 XP_005389541 MODEL 8772962 protein-coding Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN axonogenesis (ortholog); forelimb morphogenesis (ortholog); innervation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog) NW_004955402 31867651 31975930 + 102030256 AGCD01000809;AGCD01000810;GBCE01180160;XM_005372872 XP_005372929 MODEL 8950552 protein-coding Elfn2 extracellular leucine rich repeat and fibronectin type III domain containing 2 INVOLVED IN chemical synaptic transmission (ortholog); establishment of protein localization (ortholog); gene expression (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN postsynaptic density membrane (ortholog); synapse (ortholog) NW_004955413 23805494 23862067 - 102030621 AGCD01014335;AGCD01014336;AGCD01014337;GBDF01124369;XM_005379199;XM_005379200;XM_005379201;XM_013511682;XM_013511683;XM_013511684;XM_013511685;XM_013511686;XM_013511687;XM_013511688 XP_005379256;XP_005379257;XP_005379258;XP_013367136;XP_013367137;XP_013367138;XP_013367139;XP_013367140;XP_013367141;XP_013367142 MODEL 8892715 protein-coding Dus4l dihydrouridine synthase 4 like INVOLVED IN tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIi (ortholog) NW_004955410 11919710 11931593 + 102030159 AGCD01010837;GBDF01252851;XM_005377271;XM_005377272;XM_005377273;XM_005377274;XM_005377275;XM_005377276;XM_005377277;XM_005377278 XP_005377328;XP_005377329;XP_005377330;XP_005377331;XP_005377332;XP_005377333;XP_005377334;XP_005377335 MODEL 8793798 protein-coding Wwp1 WW domain containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955417 4011302 4064584 + 102006455 AGCD01017935;AGCD01017936;AGCD01017937;GBCC01046163;XM_013512748;XM_013512749;XM_013512750 XP_013368202;XP_013368203;XP_013368204 MODEL 8705691 ncrna LOC102003728 uncharacterized LOC102003728 NW_004955454 12328311 12330494 + 102003728 AGCD01045409;XR_262791 MODEL 8790923 protein-coding Cage1 cancer antigen 1 ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955465 6506177 6539094 + 102027730 AGCD01050443;AGCD01050444;GBDF01048849;XM_005398852;XM_005398853;XM_005398854;XM_005398855;XM_013521811;XM_013521812;XM_013521813;XM_013521814 XP_005398909;XP_005398910;XP_005398911;XP_005398912;XP_013377265;XP_013377266;XP_013377267;XP_013377268 MODEL 8805535 protein-coding Insl4 insulin like 4 NW_004955434 9365212 9367503 + 102029992 AGCD01032299;GBDK01328682;XM_005388657 XP_005388714 MODEL 8943639 pseudo LOC102006611 uncharacterized protein C11orf57-like NW_004955439 11295688 11296585 + 102006611 AGCD01035896 MODEL 9006267 protein-coding Tsen34 tRNA splicing endonuclease subunit 34 INVOLVED IN tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Deglutition Disorders (ortholog); intellectual disability (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); tRNA-intron endonuclease complex (ortholog) NW_004955604 84072 89419 - 102011716 AGCD01076861;GBCE01054099;XM_005414852;XM_005414853;XM_005414854;XM_005414855;XM_013510089 XP_005414909;XP_005414910;XP_005414911;XP_005414912;XP_013365543 MODEL 9023936 ncrna LOC102003383 uncharacterized LOC102003383 NW_004955440 16475861 16478883 - 102003383 AGCD01036518;GBDF01286061;XR_262033 MODEL 8986967 ncrna LOC102012502 uncharacterized LOC102012502 NW_004955456 10052149 10054952 + 102012502 AGCD01046517;GBDF01261841;XR_262892 MODEL 39133924 misc_rna 7SK 7SK RNA 8949666 protein-coding Qsox1 quiescin sulfhydryl oxidase 1 ENCODES a protein that exhibits FAD binding (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein disulfide isomerase activity (ortholog); INVOLVED IN extracellular matrix assembly (ortholog); negative regulation of macroautophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular exosome (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955406 19363938 19402134 + 102023111 AGCD01006078;AGCD01006079;AGCD01006080;AGCD01006081;AGCD01006082;GBDF01002852;GBDI01262267;XM_005375463;XM_013521310 XP_005375520;XP_013376764 MODEL 8709291 protein-coding Pola2 DNA polymerase alpha 2, accessory subunit ENCODES a protein that exhibits DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA replication (ortholog); DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 19939971 19963753 - 102012445 AGCD01023049;AGCD01023050;GBDF01279643;XM_005384504;XM_005384505;XM_005384506 XP_005384561;XP_005384562;XP_005384563 MODEL 8902881 protein-coding LOC102010437 vomeronasal type-1 receptor 4-like NW_004955603 500248 501171 - 102010437 AGCD01076850;XM_005414846 XP_005414903 MODEL 8766049 protein-coding LOC102025898 T-cell surface glycoprotein CD1e, membrane-associated-like NW_004955468 10215831 10218600 + 102025898 AGCD01052073;XM_005400312 XP_005400369 MODEL 9036935 protein-coding Bbs10 Bardet-Biedl syndrome 10 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); cone retinal bipolar cell differentiation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 10 (ortholog) NW_004955405 15571458 15574568 - 102012725 AGCD01004948;GBDJ01298756;XM_005374342 XP_005374399 MODEL 8916579 pseudo LOC102007751 olfactory receptor 147-like NW_004955412 25290203 25291080 + 102007751 AGCD01013143 MODEL 8996651 protein-coding Cops7b COP9 signalosome subunit 7B INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN COP9 signalosome (ortholog); nucleoplasm (ortholog) NW_004955453 3967241 3991802 - 102019770 AGCD01044671;AGCD01044672;GBDJ01177150;XM_005395389;XM_005395390;XM_005395391;XM_005395392;XM_013519955 XP_005395446;XP_005395447;XP_005395448;XP_005395449;XP_013375409 MODEL 8966399 ncrna LOC102005183 uncharacterized LOC102005183 NW_004955439 1843897 1881335 + 102005183 AGCD01035628;GBDF01100877;XR_001235170;XR_001235171;XR_261965;XR_261966 MODEL 39134480 misc_rna 7SK 7SK RNA 8833451 protein-coding S100pbp S100P binding protein ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955452 11078170 11114061 + 102027937 AGCD01044323;AGCD01044324;AGCD01044325;AGCD01044326;AGCD01044327;GBDK01169419;XM_005395086;XM_005395087;XM_005395088;XM_005395089;XM_005395091;XM_005395092;XM_005395093;XM_013519554;XM_013519555 XP_005395143;XP_005395144;XP_005395145;XP_005395146;XP_005395148;XP_005395149;XP_005395150;XP_013375008;XP_013375009 MODEL 8954781 protein-coding Ctrl chymotrypsin like ENCODES a protein that exhibits peptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); long QT syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955484 8781928 8783929 + 102019917 AGCD01058396;GBDJ01138415;XM_005403613 XP_005403670 MODEL 10216673 protein-coding LOC106147455 putative methyl-CpG-binding domain protein 3-like 5 NW_004955563 649052 650756 + 106147455 AGCD01074072;XM_013509127 XP_013364581 MODEL 8800425 protein-coding Evx2 even-skipped homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN limb morphogenesis (ortholog); ASSOCIATED WITH Synpolydactyly 1 (ortholog) NW_004955403 20578813 20582409 + 102006198 AGCD01002167;AGCD01002168;XM_005373888 XP_005373945 MODEL 8883330 protein-coding Fosl1 FOS like 1, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); female pregnancy (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical squamous cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); presynaptic membrane (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955422 19425741 19431801 + 102024245 AGCD01023006;GBDF01280096;XM_005384444 XP_005384501 MODEL 8902792 pseudo LOC102006616 renin receptor pseudogene NW_004955442 7678453 7681635 + 102006616 AGCD01037628;XM_005391180 MODEL 8776751 pseudo LOC102024097 transcription factor BTF3 homolog 4 pseudogene NW_004955460 13187620 13196978 + 102024097 AGCD01048674 MODEL 8947875 protein-coding Slc18b1 solute carrier family 18 member B1 ENCODES a protein that exhibits monoamine:proton antiporter activity (ortholog); polyamine:proton antiporter activity (ortholog); INVOLVED IN serotonin uptake (ortholog); spermidine transport (ortholog); spermine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN secretory granule membrane (ortholog); synaptic vesicle membrane (ortholog) NW_004955436 13286811 13316037 - 102025390 AGCD01033856;GBDK01322576;XM_005389219;XM_013516687;XM_013516688 XP_005389276;XP_013372141;XP_013372142 MODEL 39133233 snrna U4 U4 spliceosomal RNA 39133268 snorna SNORD48 Small nucleolar RNA SNORD48 8838861 protein-coding Ptgis prostaglandin I2 synthase ENCODES a protein that exhibits heme binding (ortholog); hydroperoxy icosatetraenoate dehydratase activity (ortholog); prostaglandin-I synthase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arterial Occlusive Diseases (ortholog); atherosclerosis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955445 8624228 8663385 + 102005315 AGCD01039608;AGCD01039609;GBCE01000913;XM_005392329 XP_005392386 MODEL 8975797 protein-coding Dennd6b DENN domain containing 6B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog) NW_004955413 33324081 33336518 - 102025995 AGCD01014663;GBBH01065557;GBCE01074576;XM_005379556 XP_005379613 MODEL 8968151 protein-coding LOC102009291 uncharacterized LOC102009291 NW_004955495 1844763 1851588 - 102009291 AGCD01061735;GBBH01140669;XM_005405612;XM_005405613;XM_005405614;XM_013505148 XP_005405669;XP_005405670;XP_005405671;XP_013360602 MODEL 10236565 protein-coding LOC106148548 uncharacterized LOC106148548 NW_004955423 25426008 25427079 - 106148548 AGCD01024073;GBDI01314805;XM_013514471;XM_013514472 XP_013369925;XP_013369926 MODEL 8795440 protein-coding LOC102007756 two pore calcium channel protein 2-like NW_004955470 3199435 3237984 - 102007756 AGCD01052693;GBDK01185352;XM_005400630;XM_005400631;XM_005400632;XM_013522828;XM_013522829 XP_005400687;XP_005400688;XP_005400689;XP_013378282;XP_013378283 MODEL 39132288 rrna 5S_rRNA 5S ribosomal RNA 8708247 protein-coding Rgl3 ral guanine nucleotide dissociation stimulator like 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955495 2304820 2319171 - 102029874 AGCD01061764;AGCD01061765;AGCD01061766;GBCE01074618;XM_013505110 XP_013360564 MODEL 8776668 protein-coding Insl5 insulin like 5 INVOLVED IN positive regulation of feeding behavior (ortholog) NW_004955423 24113596 24116795 + 102019078 AGCD01024031;GBDF01119655;XM_005385288 XP_005385345 MODEL 8790281 ncrna LOC102029804 uncharacterized LOC102029804 NW_004955445 1723762 1728903 - 102029804 AGCD01039345;GBDJ01105838;XR_001235543;XR_262292 MODEL 9030889 protein-coding Shprh SNF2 histone linker PHD RING helicase ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955436 14698210 14779231 + 102028463 AGCD01033875;AGCD01033876;GBDF01251664;XM_005389229 XP_005389286 MODEL 8795560 protein-coding Calb1 calbindin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); INVOLVED IN cochlea development (ortholog); learning or memory (ortholog); locomotory behavior (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); bilirubin metabolic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN neuronal cell body; terminal bouton; axon (ortholog) NW_004955417 6944300 6969341 - 102011116 AGCD01017994;AGCD01017995;GBCQ01008880;XM_005381764 XP_005381821 MODEL 8978965 protein-coding Tsen54 tRNA splicing endonuclease subunit 54 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar hypoplasia (ortholog); FOUND IN tRNA-intron endonuclease complex (ortholog) NW_004955553 2367476 2376704 + 102027464 AGCD01072935;GBDF01083927;XM_005412297;XM_013508627;XM_013508628 XP_005412354;XP_013364081;XP_013364082 MODEL 8726480 protein-coding Dck deoxycytidine kinase ENCODES a protein that exhibits ATP binding (ortholog); cytidine kinase activity (ortholog); deoxyadenosine kinase activity (ortholog); INVOLVED IN deoxycytidine metabolic process (ortholog); nucleoside phosphate biosynthetic process (ortholog); purine nucleotide salvage (ortholog); PARTICIPATES IN gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955447 2031851 2067005 - 102026689 AGCD01040526;AGCD01040527;AGCD01040528;GBDJ01304367;GBDJ01336545;XM_005392943 XP_005393000 MODEL 8791025 pseudo LOC102005525 protein kinase C iota type pseudogene NW_004955445 18126528 18128715 + 102005525 AGCD01039898 MODEL 8956722 protein-coding Ppil6 peptidylprolyl isomerase like 6 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955411 34449508 34481370 - 102018067 AGCD01012401;GBDI01024216;XM_005377868;XM_005377869;XM_005377870;XM_005377871;XM_005377872;XM_005377873;XM_005377874;XM_013510822;XM_013510823 XP_005377925;XP_005377926;XP_005377927;XP_005377928;XP_005377929;XP_005377930;XP_005377931;XP_013366276;XP_013366277 MODEL 39131682 rrna 5S_rRNA 5S ribosomal RNA 8734323 protein-coding LOC102012904 heterogeneous nuclear ribonucleoproteins A2/B1-like NW_004955442 15309996 15311329 - 102012904 AGCD01037865;GBDF01258035;XM_005391493 XP_005391550 MODEL 8851986 ncrna LOC102018682 uncharacterized LOC102018682 NW_004955405 39905538 39909717 + 102018682 AGCD01005503;GBDJ01111460;XR_259449 MODEL 8786749 protein-coding Ctsa cathepsin A ENCODES a protein that exhibits carboxypeptidase activity (ortholog); enzyme activator activity (ortholog); serine-type carboxypeptidase activity (ortholog); INVOLVED IN negative regulation of chaperone-mediated autophagy (ortholog); proteolysis (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); amblyopia (ortholog); brain small vessel disease 6 with leukoencephalopathy (ortholog); FOUND IN lysosome (ortholog) NW_004955445 11399151 11405069 - 102025735 AGCD01039690;GBDF01087146;XM_005392401 XP_005392458 MODEL 8881448 protein-coding Chmp7 charged multivesicular body protein 7 INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); exit from mitosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); chromatin (ortholog) NW_004955403 46467463 46478897 + 102017294 AGCD01002859;AGCD01002860;GBDF01152869;XM_005373696 XP_005373753 MODEL 8847357 protein-coding Eef2k eukaryotic elongation factor 2 kinase ENCODES a protein that exhibits calmodulin binding (ortholog); elongation factor-2 kinase activity (ortholog); INVOLVED IN cellular response to anoxia (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955493 865830 922765 + 102014911 AGCD01060868;AGCD01060869;AGCD01060870;AGCD01060871;GBDJ01005099;XM_005405078;XM_005405079;XM_005405080;XM_005405081;XM_005405083;XM_013504852 XP_005405135;XP_005405136;XP_005405137;XP_005405138;XP_005405140;XP_013360306 MODEL 9016582 protein-coding Bbs12 Bardet-Biedl syndrome 12 INVOLVED IN chaperone-mediated protein complex assembly (ortholog); eating behavior (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 12 (ortholog) NW_004955428 17957672 17966638 - 102013634 AGCD01028054;AGCD01028055;GBDJ01171174;XM_005386764;XM_005386765;XM_005386766;XM_005386767;XM_005386768 XP_005386821;XP_005386822;XP_005386823;XP_005386824;XP_005386825 MODEL 730469516 snorna SNORA51 Small nucleolar RNA SNORA51 8946101 ncrna LOC102025169 uncharacterized LOC102025169 NW_004955537 234120 234410 + 102025169 AGCD01070855;GBDI01045663;XR_264769 MODEL 9003734 ncrna LOC102003731 uncharacterized LOC102003731 NW_004955407 34830164 34933219 - 102003731 AGCD01007727;AGCD01007728;GBDF01191929;XR_259609 MODEL 8894159 protein-coding Dusp1 dual specificity phosphatase 1 ENCODES a protein that exhibits growth factor binding (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to chemokine (ortholog); cellular response to hormone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Amyloid Neuropathies (ortholog); anti-basement membrane glomerulonephritis (ortholog); arteriosclerosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955408 25481294 25484381 - 102026722 AGCD01008647;GBCE01000631;XM_005376341 XP_005376398 MODEL 9014131 protein-coding Ralyl RALY RNA binding protein like ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955417 2123050 2747906 + 102025909 AGCD01017870;AGCD01017871;AGCD01017872;AGCD01017873;AGCD01017874;AGCD01017875;AGCD01017876;AGCD01017877;AGCD01017878;AGCD01017879;AGCD01017880;AGCD01017881;AGCD01017882;GBDI01355838;XM_005381724;XM_005381725;XM_005381727;XM_013512855;XM_013512856 XP_005381781;XP_005381782;XP_005381784;XP_013368309;XP_013368310 MODEL 8907336 protein-coding Wwp2 WW domain containing E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN extracellular transport (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of potassium ion export across plasma membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955484 6853820 6967261 - 102021879 AGCD01058297;AGCD01058298;AGCD01058299;AGCD01058300;GBCB01059211;XM_013503940;XM_013503941 XP_013359394;XP_013359395 MODEL 8968284 protein-coding Elk1 ETS transcription factor ELK1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to lipid (ortholog); cellular response to testosterone stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); mitochondrial membrane (ortholog) NW_004955516 431081 444871 + 102015338 AGCD01067385;GBCE01187012;XM_005408941;XM_005408942 XP_005408998;XP_005408999 MODEL 8761382 ncrna LOC102011240 uncharacterized LOC102011240 NW_004955435 21229107 21260847 + 102011240 AGCD01033474;GBDI01025489;XR_001234872;XR_261731;XR_261732 MODEL 8998560 protein-coding LOC102003389 vomeronasal type-1 receptor 1-like NW_004955558 668713 669606 + 102003389 AGCD01073385;XM_005412740 XP_005412797 MODEL 9064795 protein-coding S100z S100 calcium binding protein Z ENCODES a protein that exhibits calcium ion binding (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955425 24014039 24022842 - 102019932 AGCD01025872;GBCE01049545;XM_005386034;XM_005386036;XM_005386037;XM_013514756;XM_013514757;XM_013514758;XM_013514759;XM_013514760;XM_013514761;XM_013514762 XP_005386091;XP_005386093;XP_005386094;XP_013370210;XP_013370211;XP_013370212;XP_013370213;XP_013370214;XP_013370215;XP_013370216 MODEL 9026018 protein-coding Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B ENCODES a protein that exhibits RNA polymerase I core promoter sequence-specific DNA binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); RNA polymerase I preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleolus (ortholog); RNA polymerase I core factor complex (ortholog); RNA polymerase transcription factor SL1 complex (ortholog) NW_004955487 5359132 5394564 + 102025691 AGCD01059330;GBDF01081287;XM_005404399 XP_005404456 MODEL 8932363 protein-coding Ccdc81 coiled-coil domain containing 81 ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) NW_004955414 6567722 6623043 - 102012306 AGCD01014921;AGCD01014922;AGCD01014923;AGCD01014924;GBBH01193590;GBDI01027155;XM_013511796 XP_013367250 MODEL 9010916 protein-coding Polb DNA polymerase beta ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); damaged DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); base-excision repair (ortholog); base-excision repair, gap-filling (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955536 542179 595198 - 102008456 AGCD01070729;AGCD01070730;AGCD01070731;AGCD01070732;GBDF01009059;XM_005410509 XP_005410566 MODEL 9014487 ncrna LOC102024098 uncharacterized LOC102024098 NW_004955462 4008169 4011134 - 102024098 AGCD01049214;XR_263093 MODEL 9057089 protein-coding Qsox2 quiescin sulfhydryl oxidase 2 INVOLVED IN female gonad development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) NW_004955513 4438078 4463276 + 102013529 AGCD01066927;GBDK01241930;XM_005408519 XP_005408576 MODEL 8773419 pseudo LOC102006241 40S ribosomal protein S27-like pseudogene NW_004955475 4541672 4542105 + 102006241 AGCD01054882 MODEL 8748904 protein-coding Fosl2 FOS like 2, AP-1 transcription factor subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); B cell differentiation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH APLASIA CUTIS-ENAMEL DYSPLASIA SYNDROME (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955469 10297179 10319180 + 102011972 AGCD01052531;GBCQ01072990;XM_005400525;XM_005400527;XM_013522638;XM_013522639 XP_005400582;XP_005400584;XP_013378092;XP_013378093 MODEL 8762389 protein-coding LOC102022011 IQ domain-containing protein F5 NW_004955532 3547528 3549402 - 102022011 AGCD01070286;GBDK01320263;XM_005410329 XP_005410386 MODEL 39134481 misc_rna 7SK 7SK RNA 8940608 protein-coding Ark2n arkadia (RNF111) N-terminal like PKA signaling regulator 2N ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of viral life cycle (ortholog); response to activity (ortholog); skeletal muscle fiber development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955402 31717996 31810401 + 102028597 AGCD01000803;AGCD01000804;AGCD01000805;AGCD01000806;AGCD01000807;GBCB01056316;XM_005372867;XM_005372868;XM_005372869;XM_005372870 XP_005372924;XP_005372925;XP_005372926;XP_005372927 MODEL 9002394 protein-coding Cops8 COP9 signalosome subunit 8 INVOLVED IN negative regulation of cell population proliferation (ortholog); protein deneddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955542 3129184 3140232 - 102011245 AGCD01071548;GBDI01117246;XM_005411238 XP_005411295 MODEL 8909410 protein-coding Chn1 chimerin 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); motor neuron axon guidance (ortholog); regulation of axonogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); Duane retraction syndrome (ortholog) NW_004955449 574407 635566 + 102003921 AGCD01041770;AGCD01041771;AY533210;XM_005393180;XM_013518798;XM_013518799 AAS59413;XP_005393237;XP_013374252;XP_013374253 MODEL 8738028 ncrna LOC102009292 uncharacterized LOC102009292 NW_004955423 372935 383250 + 102009292 AGCD01023411;GBDI01297765;XR_260937 MODEL 8853520 pseudo LOC102012508 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955459 6804477 6804982 + 102012508 AGCD01048085;XR_263017 MODEL 8764765 protein-coding Denr density regulated re-initiation and release factor INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); translation initiation complex (ortholog) NW_004955482 5954319 5970832 - 102027851 AGCD01057357;AGCD01057358;AGCD01057359;GBCB01020540;XM_005403074 XP_005403131 MODEL 8850637 pseudo LOC102007759 rho-related GTP-binding protein RhoG-like NW_004955475 10913053 10914439 + 102007759 AGCD01055126 MODEL 8725807 pseudo LOC102025172 vasculin pseudogene NW_004955540 1909030 1917626 + 102025172 AGCD01071308;XR_264822 MODEL 8973019 ncrna LOC102010438 uncharacterized LOC102010438 NW_004955649 5929 9935 + 102010438 AGCD01077777;AGCD01077778;GBDJ01151562;XR_265178 MODEL 8797513 ncrna LOC102006617 uncharacterized LOC102006617 NW_004955554 279370 284309 - 102006617 AGCD01072943;XR_264944 MODEL 8775056 protein-coding Calb2 calbindin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); regulation of synaptic plasticity (ortholog); synaptic signaling (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Endometrial Neoplasms (ortholog); FOUND IN neuronal cell body; vestibular calyx terminal; cuticular plate (ortholog) NW_004955484 4075103 4103509 + 102007998 AGCD01058202;GBDF01159941;XM_005403497 XP_005403554 MODEL 9055678 protein-coding Tsfm Ts translation elongation factor, mitochondrial INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); combined oxidative phosphorylation deficiency 3 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 5489551 5498572 + 102012162 AGCD01047494;AGCD01047495;GBDI01117542;XM_005397417;XM_005397418 XP_005397474;XP_005397475 MODEL 8896312 ncrna LOC102005186 uncharacterized LOC102005186 NW_004955553 939259 940745 - 102005186 AGCD01072866;GBDF01291522;XR_264933 MODEL 9046730 protein-coding LOC102012905 tektin-4-like NW_004955442 16149329 16154459 + 102012905 AGCD01037891;AGCD01037892;GBDF01003534;XM_005391594 XP_005391651 MODEL 8828174 protein-coding Slc19a1 solute carrier family 19 member 1 ENCODES a protein that exhibits 2',3'-cyclic GMP-AMP binding (ortholog); antiporter activity (ortholog); cyclic-GMP-AMP transmembrane transporter activity (ortholog); INVOLVED IN cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); female pregnancy (ortholog); folate import across plasma membrane (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); adenoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955407 42132216 42154252 - 102013801 AGCD01007885;GBBH01088077;XM_005375919;XM_005375920;XM_013505554;XM_013505559;XM_013505567;XM_013505573;XM_013505575;XM_013505579;XM_013505583;XM_013505590;XM_013505595;XM_013505600;XM_013505606;XM_013505612;XM_013505619;XM_013505628;XM_013505630;XM_013505636;XM_013505639;XM_013505642 XP_005375976;XP_005375977;XP_013361008;XP_013361013;XP_013361021;XP_013361027;XP_013361029;XP_013361033;XP_013361037;XP_013361044;XP_013361049;XP_013361054;XP_013361060;XP_013361066;XP_013361073;XP_013361082;XP_013361084;XP_013361090;XP_013361093;XP_013361096 MODEL 39133237 snrna U4 U4 spliceosomal RNA 8710613 protein-coding Lrrc59 leucine rich repeat containing 59 ASSOCIATED WITH glioblastoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial nucleoid (ortholog) NW_004955451 11316139 11328107 + 102013896 AGCD01043349;GBDF01007688;XM_005394173 XP_005394230 MODEL 730469510 snorna SNORA51 Small nucleolar RNA SNORA51 8717136 protein-coding LOC102006243 calsyntenin-1 NW_004955479 9732376 9734653 + 102006243 AGCD01056494;GBCE01076233;GBDI01068209;XM_013503286 XP_013358740 MODEL 9054350 protein-coding Bbs2 Bardet-Biedl syndrome 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); artery smooth muscle contraction (ortholog); brain morphogenesis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/2, Digenic (ortholog); FOUND IN BBSome (ortholog); ciliary basal body (ortholog); ciliary membrane (ortholog) NW_004955433 14266190 14321780 - 102016408 AGCD01031711;GBDK01058610;XM_005388353;XM_013516125 XP_005388410;XP_013371579 MODEL 39133925 misc_rna 7SK 7SK RNA 39132290 rrna 5S_rRNA 5S ribosomal RNA 8702289 protein-coding Elk3 ETS transcription factor ELK3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955405 32526911 32559580 + 102009344 AGCD01005334;GBDJ01136162;XM_005374495;XM_013518514;XM_013518521;XR_259422 XP_005374552;XP_013373968;XP_013373975 MODEL 10134904 ncrna LOC106148549 uncharacterized LOC106148549 NW_004955423 25431119 25434791 + 106148549 AGCD01024074;AGCD01024075;GBBH01096215;XR_001234097 MODEL 9028373 protein-coding Rgma repulsive guidance molecule BMP co-receptor a ENCODES a protein that exhibits coreceptor activity (ortholog); signaling receptor binding (ortholog); transferrin receptor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of collateral sprouting (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); middle cerebral artery infarction (ortholog); multiple sclerosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955416 21221023 21261831 - 102019388 AGCD01017498;AGCD01017499;AGCD01017500;GBCB01024629;GBDI01174076;XM_005381602 XP_005381659 MODEL 8898757 protein-coding Insl6 insulin like 6 INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); male gonad development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Hereditary Neoplastic Syndromes (ortholog) NW_004955434 9349033 9355817 - 102029657 AGCD01032299;GBDF01045874;XM_005388656 XP_005388713 MODEL 8937284 protein-coding Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor INVOLVED IN positive regulation of TORC1 signaling (ortholog); protein-RNA complex assembly (ortholog); regulation of androgen receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955421 15358387 15455534 + 102027862 AGCD01021980;GBCE01080321;XM_005383768;XM_005383769 XP_005383825;XP_005383826 MODEL 8923201 pseudo LOC102029805 60S ribosomal protein L39 pseudogene NW_004955445 8134194 8134349 + 102029805 AGCD01039561;XM_005392320 MODEL 9065187 protein-coding Timm10 translocase of inner mitochondrial membrane 10 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); unfolded protein holdase activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); rhabdomyosarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) NW_004955511 2498498 2500828 - 102017900 AGCD01066409;GBCE01052696;XM_005407996 XP_005408053 MODEL 8836200 protein-coding Depdc1 DEP domain containing 1 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955423 23137841 23157548 + 102011214 AGCD01023994;GBDF01159170;XM_005385261;XM_005385263;XM_005385265;XM_005385267;XM_013514542 XP_005385318;XP_005385320;XP_005385322;XP_005385324;XP_013369996 MODEL 9001312 protein-coding Dclk1 doublecortin like kinase 1 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN axon extension (ortholog); axonogenesis (ortholog); brain development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) NW_004955431 9975629 10302605 + 102003267 AGCD01030200;AGCD01030201;AGCD01030202;GBBH01017176;XM_005387689;XM_005387690;XM_005387693 XP_005387746;XP_005387747;XP_005387750 MODEL 8897962 protein-coding Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 ENCODES a protein that exhibits 5-diphosphoinositol pentakisphosphate 1-kinase activity (ortholog); inositol hexakisphosphate 1-kinase activity (ortholog); inositol hexakisphosphate 5-kinase activity (ortholog); INVOLVED IN inositol metabolic process (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955416 10074239 10113268 - 102008408 AGCD01017105;AGCD01017106;GBCB01060923;XM_005381392;XM_005381393;XM_005381402;XM_013512448;XM_013512449;XM_013512450;XM_013512451;XM_013512452;XM_013512453;XM_013512454;XM_013512455;XM_013512456 XP_005381449;XP_005381450;XP_005381459;XP_013367902;XP_013367903;XP_013367904;XP_013367905;XP_013367906;XP_013367907;XP_013367908;XP_013367909;XP_013367910 MODEL 730468932 snorna SNORD49 Small nucleolar RNA SNORD49 8843378 protein-coding Pold1 DNA polymerase delta 1, catalytic subunit ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); chromatin binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); delta DNA polymerase complex (ortholog); nucleoplasm (ortholog) NW_004955559 712375 730551 - 102020387 AGCD01073609;GBBH01102863;XM_005412790;XM_013509023;XM_013509024;XM_013509025;XM_013509026;XM_013509027 XP_005412847;XP_013364477;XP_013364478;XP_013364479;XP_013364480;XP_013364481 MODEL 8764659 ncrna LOC102024099 uncharacterized LOC102024099 NW_004955463 6815241 6819726 - 102024099 AGCD01049706;GBDJ01170656;XR_001236633 MODEL 8810989 protein-coding Ctsb cathepsin B ENCODES a protein that exhibits collagen binding (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagy (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to thyroid hormone stimulus (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute necrotizing pancreatitis (ortholog); Albuminuria (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); cell surface (ortholog) NW_004955403 53086236 53100217 - 102003509 AGCD01003032;AGCD01003033;AGCD01003034;GBBH01000375;XM_005373830 XP_005373887 MODEL 8728640 protein-coding Eef2kmt eukaryotic elongation factor 2 lysine methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955442 12467077 12475902 + 102026804 AGCD01037736;GBBH01209835;XM_005391251 XP_005391308 MODEL 8760021 protein-coding Foxa1 forkhead box A1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); anatomical structure formation involved in morphogenesis (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); brain glioma (ortholog); breast cancer (ortholog); FOUND IN fibrillar center (ortholog); microvillus (ortholog); nucleoplasm (ortholog) NW_004955409 23598127 23599827 + 102021102 AGCD01010069;GBBH01000603;GBDI01059753;XM_013510358 XP_013365812 MODEL 10262069 protein-coding LOC106147457 putative gustatory receptor clone PTE03 NW_004955563 339803 340762 - 106147457 AGCD01074062;XM_013509131 XP_013364585 MODEL 8917120 protein-coding Arl1 ARF like GTPase 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi vesicle transport (ortholog); protein localization to Golgi apparatus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955405 36913011 36932383 - 102026286 AGCD01005429;AGCD01005430;GBBH01031870;XM_005374549 XP_005374606 MODEL 8837929 protein-coding Ramac RNA guanine-7 methyltransferase activating subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); molecular function activator activity (ortholog); RNA binding (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN methyltransferase complex (ortholog); mRNA cap methyltransferase RNMT:RAMAC complex (ortholog); mRNA capping enzyme complex (ortholog) NW_004955416 13686997 13691792 - 102004382 AGCD01017232;GBCE01097705;XM_005381468;XM_013512498 XP_005381525;XP_013367952 MODEL 9013531 protein-coding Dusp10 dual specificity phosphatase 10 ENCODES a protein that exhibits JUN kinase binding (ortholog); MAP kinase phosphatase activity (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN negative regulation of epithelial cell migration (ortholog); negative regulation of epithelial cell proliferation (ortholog); negative regulation of epithelium regeneration (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955520 2338548 2371591 + 102020480 AGCD01068078;AGCD01068079;GBDK01116090;XM_005409261;XM_013507067 XP_005409318;XP_013362521 MODEL 8893980 protein-coding Wwtr1 WW domain containing transcription regulator 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cilium assembly (ortholog); glomerulus development (ortholog); heart process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alveolar rhabdomyosarcoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955448 745419 868313 - 102020732 AGCD01041237;AGCD01041238;GBCB01003406;GBDJ01135085;XM_005393000 XP_005393057 MODEL 8962479 pseudo LOC102003391 pre-mRNA-splicing factor RBM22 pseudogene NW_004955443 7720328 7734609 + 102003391 AGCD01038296;AGCD01038297 MODEL 39131683 rrna 5S_rRNA 5S ribosomal RNA 8852351 protein-coding LOC102005530 arylacetamide deacetylase-like NW_004955448 2938773 2958946 + 102005530 AGCD01041296;AGCD01041297;AGCD01041298;AGCD01041299;GBCQ01129513;XM_005393035 XP_005393092 MODEL 8886345 pseudo LOC102007760 uncharacterized LOC102007760 NW_004955476 4007426 4119894 - 102007760 AGCD01055264;AGCD01055265;AGCD01055266 MODEL 8815370 protein-coding LOC102025899 olfactory receptor 51G2-like NW_004955414 20989645 20990598 + 102025899 AGCD01015399;XM_005380070 XP_005380127 MODEL 8975375 protein-coding S1pr1 sphingosine-1-phosphate receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G protein-coupled receptor binding (ortholog); sphingolipid binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Cardiomegaly (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); presynapse (ortholog) NW_004955435 5880266 5882823 + 102008975 AGCD01032903;GBDI01225054;XM_013516565 XP_013372019 MODEL 8871473 protein-coding Taf1c TATA-box binding protein associated factor, RNA polymerase I subunit C ENCODES a protein that exhibits RNA polymerase I core promoter sequence-specific DNA binding (ortholog); RNA polymerase I general transcription initiation factor activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955564 121988 132347 + 102019118 AGCD01074187;GBDF01193645;XM_005413220;XM_005413222;XM_005413223;XM_013509199;XM_013509201;XM_013509202 XP_005413277;XP_005413279;XP_005413280;XP_013364653;XP_013364655;XP_013364656 MODEL 9017911 protein-coding Ccdc82 coiled-coil domain containing 82 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog) NW_004955412 1178695 1208883 - 102004914 AGCD01012509;AGCD01012510;AGCD01012511;GBCE01009133;GBCE01009135;XM_005377958 XP_005378015 MODEL 8920367 protein-coding Ptgr1 prostaglandin reductase 1 ENCODES a protein that exhibits 13-lipoxin reductase activity (ortholog); 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); 2-alkenal reductase (NADPH) activity (ortholog); INVOLVED IN leukotriene B4 metabolic process (ortholog); lipoxin A4 metabolic process (ortholog); negative regulation of positive chemotaxis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955419 15708456 15738774 + 102009949 AGCD01020087;AGCD01020088;AGCD01020089;GBDK01361003;XM_005382721;XM_005382722 XP_005382778;XP_005382779 MODEL 8791260 protein-coding Qtman queuosine-tRNA mannosyltransferase ENCODES a protein that exhibits tRNA-queuosine(34) beta-mannosyltransferase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA modification (ortholog); tRNA wobble guanine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955440 10334584 10702436 - 102017605 AGCD01036390;AGCD01036391;AGCD01036392;AGCD01036393;AGCD01036394;AGCD01036395;AGCD01036396;AGCD01036397;GBCB01025133;XM_005390782;XM_005390783;XM_005390784;XM_005390785;XM_005390786;XM_005390787;XM_013517453;XM_013517454;XM_013517455;XM_013517456 XP_005390839;XP_005390840;XP_005390841;XP_005390842;XP_005390843;XP_005390844;XP_013372907;XP_013372908;XP_013372909;XP_013372910 MODEL 39134482 misc_rna 7SK 7SK RNA 39133238 snrna U4 U4 spliceosomal RNA 8897015 protein-coding LOC102003733 E3 ubiquitin-protein ligase TRIM50 NW_004955456 14320894 14328341 + 102003733 AGCD01046639;GBDF01267146;XM_005396793;XM_005396795;XM_013520599 XP_005396850;XP_005396852;XP_013376053 MODEL 39131352 protein-coding CHN1 chimerin 1 8720449 pseudo LOC102012517 60S ribosomal protein L38 pseudogene NW_004955412 19711838 19712048 + 102012517 AGCD01012971 MODEL 8838948 ncrna LOC102010442 uncharacterized LOC102010442 NW_004955452 2929736 2933649 - 102010442 AGCD01043906;GBDF01177228;XR_262642 MODEL 8958681 pseudo LOC102018687 translationally-controlled tumor protein pseudogene NW_004955454 7152912 7153484 - 102018687 AGCD01045283;XM_005396028 MODEL 8828092 protein-coding Insm1 INSM transcriptional repressor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); cyclin binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal chromaffin cell differentiation (ortholog); cell differentiation (ortholog); endocrine pancreas development (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN nucleus (ortholog); transcription repressor complex (ortholog) NW_004955415 28396176 28398114 + 102010364 AGCD01016641;GBBH01179747;XM_013512134 XP_013367588 MODEL 9024369 protein-coding Timm10b translocase of inner mitochondrial membrane 10B INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN carrier pathway of mitochondrial protein import; ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) NW_004955414 22214457 22217351 + 102023142 AGCD01015449;GBDK01146994;XM_005380148 XP_005380205 MODEL 8898669 protein-coding Calcb calcitonin related polypeptide beta ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN calcitonin gene-related peptide receptor signaling pathway (ortholog); ASSOCIATED WITH migraine (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 30126637 30131214 + 102026100 AGCD01015727;GBDF01041171;XM_005380339;XM_013511759 XP_005380396;XP_013367213 MODEL 8914888 ncrna LOC102012908 uncharacterized LOC102012908 NW_004955444 12340446 12343731 - 102012908 AGCD01039069;GBDK01125336;XR_262259 MODEL 730468940 snorna SNORD49 Small nucleolar RNA SNORD49 9005788 protein-coding Tsg101 tumor susceptibility 101 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell differentiation (ortholog); endosome to lysosome transport (ortholog); exosomal secretion (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); cervix carcinoma (ortholog); endometrial adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955414 33154812 33193769 - 102023023 AGCD01015799;AGCD01015800;GBCE01077499;XM_005380422;XM_005380423 XP_005380479;XP_005380480 MODEL 8956321 protein-coding Ewsr1 EWS RNA binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 3571025 3599975 + 102030274 AGCD01045636;GBDF01002227;XM_005396190;XM_005396191;XM_005396193 XP_005396247;XP_005396248;XP_005396250 MODEL 8965471 protein-coding Lrrc61 leucine rich repeat containing 61 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955491 4942934 4954705 + 102018103 AGCD01060465;XM_013504595 XP_013360049 MODEL 8857193 protein-coding Ptgr2 prostaglandin reductase 2 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); zinc ion binding (ortholog); INVOLVED IN prostaglandin metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955523 1519767 1549998 - 102024499 AGCD01068523;AGCD01068524;AGCD01068525;GBCQ01000257;XM_005409413 XP_005409470 MODEL 8857087 protein-coding Cops9 COP9 signalosome subunit 9 INVOLVED IN cellular response to UV (ortholog); negative regulation of protein localization to nucleolus (ortholog); negative regulation of protein neddylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN chromatin (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955542 1131110 1135871 + 102019202 AGCD01071489;GBDI01018786;XM_005411169 XP_005411226 MODEL 8929971 pseudo LOC102009294 volume-regulated anion channel subunit LRRC8D-like NW_004955497 504156 510636 - 102009294 AGCD01062420;AGCD01062421 MODEL 9039610 protein-coding LOC102011242 triggering receptor expressed on myeloid cells 1 NW_004955437 7849199 7863437 - 102011242 AGCD01034469;AGCD01034470;GBDJ01061958;XM_005389685;XM_013517118 XP_005389742;XP_013372572 MODEL 39133926 misc_rna 7SK 7SK RNA 8711873 ncrna LOC102006247 uncharacterized LOC102006247 NW_004955418 22849622 22877924 - 102006247 AGCD01019292;GBDF01144012;XR_260583 MODEL 39132292 rrna 5S_rRNA 5S ribosomal RNA 8777958 protein-coding LOC102025174 chromosome unknown open reading frame, human C16orf95 ASSOCIATED WITH esophageal cancer (ortholog); stomach cancer (ortholog); thymoma (ortholog) NW_004955541 1795301 1807870 - 102025174 AGCD01071388;GBDF01003427;XM_005410998;XM_005410999;XM_005411000 XP_005411055;XP_005411056;XP_005411057 MODEL 10358988 ncrna LOC106147459 uncharacterized LOC106147459 NW_004955563 1613021 1617518 + 106147459 AGCD01074153;GBDK01373082;XR_001232371 MODEL 8740819 pseudo LOC102003734 RWD domain-containing protein 1 pseudogene NW_004955457 11994927 11995651 + 102003734 AGCD01046997 MODEL 8976881 protein-coding Arl10 ARF like GTPase 10 ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955408 28671451 28678711 + 102010032 AGCD01008722;GBBH01223940;XM_005376373;XM_013509552 XP_005376430;XP_013365006 MODEL 8707158 ncrna LOC102006623 uncharacterized LOC102006623 NW_004955563 2035807 2036366 + 102006623 AGCD01074168;GBDF01050491;XR_265019 MODEL 8918918 protein-coding Elk4 ETS transcription factor ELK4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955406 41325921 41333503 - 102010336 AGCD01006677;GBCE01022092;GBDF01222223;XM_013522928 XP_013378382 MODEL 8958932 protein-coding Rgmb repulsive guidance molecule BMP co-receptor b ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell adhesion (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH lymphoma (ortholog); Prostatic Neoplasms (ortholog); rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); plasma membrane (ortholog) NW_004955418 14305634 14321804 - 102027979 AGCD01019071;GBCE01044704;GBDK01009283;XM_013513020 XP_013368474 MODEL 8871022 protein-coding LOC102029807 UDP-glucuronosyltransferase 2B17-like NW_004955447 4322427 4331601 + 102029807 AGCD01040712;XM_013518537 XP_013373991 MODEL 8909976 pseudo LOC102022012 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 pseudogene NW_004955534 3841086 3842295 + 102022012 AGCD01070603;XM_005410477 MODEL 8821926 protein-coding Slc19a2 solute carrier family 19 member 2 ENCODES a protein that exhibits thiamine transmembrane transporter activity (ortholog); INVOLVED IN pyridoxine transport (ortholog); spermatogenesis (ortholog); thiamine diphosphate biosynthetic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH angle-closure glaucoma (ortholog); cataract (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955462 7786920 7804828 + 102012933 AGCD01049309;GBDF01308169;XM_005398189 XP_005398246 MODEL 8876044 protein-coding Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 ENCODES a protein that exhibits 5-diphosphoinositol pentakisphosphate 1-kinase activity (ortholog); ATP binding (ortholog); inositol hexakisphosphate 1-kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 100 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog) NW_004955418 10822220 10898070 - 102026976 AGCD01018987;AGCD01018988;GBDF01157112;XM_005382192;XM_005382193;XM_005382195;XM_005382196;XM_005382197;XM_005382198;XM_005382199;XM_005382200;XM_005382201;XM_005382204;XM_013513002;XM_013513003;XM_013513004;XM_013513005;XM_013513006 XP_005382249;XP_005382250;XP_005382252;XP_005382253;XP_005382254;XP_005382255;XP_005382256;XP_005382257;XP_005382258;XP_005382261;XP_013368456;XP_013368457;XP_013368458;XP_013368459;XP_013368460 MODEL 9020507 protein-coding S1pr2 sphingosine-1-phosphate receptor 2 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); filopodium assembly (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 68 (ortholog); disease of cellular proliferation (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); presynapse (ortholog) NW_004955495 1528963 1530527 - 102029193 AGCD01061698;GBBH01149946;GBDK01431367;XM_005405584 XP_005405641 MODEL 9008246 protein-coding LOC102024103 acrosomal protein SP-10-like NW_004955412 26731649 26733395 + 102024103 AGCD01013211;XM_005378471 XP_005378528 MODEL 8850257 protein-coding Calcoco1 calcium binding and coiled-coil domain 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN nuclear receptor-mediated steroid hormone signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955458 994511 1009430 - 102024978 AGCD01047160;GBBH01091176;XM_005397193;XM_005397194 XP_005397250;XP_005397251 MODEL 8823706 protein-coding Foxa2 forkhead box A2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH combined pituitary hormone deficiency 3 (ortholog); Delayed Puberty (ortholog); Diaphragmatic Hernia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955415 29982940 29987093 - 102028742 AGCD01016656;GBDK01076707;XM_005380957;XM_005380958 XP_005381014;XP_005381015 MODEL 8729318 protein-coding Bbs4 Bardet-Biedl syndrome 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); dynactin binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adult behavior (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); centriole (ortholog) NW_004955450 4624634 4668470 - 102027595 AGCD01042470;AGCD01042471;AGCD01042472;AGCD01042473;AGCD01042474;GBDJ01314473;XM_013518828 XP_013374282 MODEL 9030597 protein-coding Ramp1 receptor activity modifying protein 1 ENCODES a protein that exhibits amylin receptor activity (ortholog); calcitonin gene-related peptide binding (ortholog); calcitonin gene-related peptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); amylin receptor signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cell surface (ortholog); CGRP receptor complex (ortholog); extracellular region (ortholog) NW_004955542 2530349 2564072 - 102016423 AGCD01071524;AGCD01071525;GBBH01000037;GBDF01085513;XM_013508020 XP_013363474 MODEL 8804283 protein-coding Shroom1 shroom family member 1 ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog) NW_004955408 4194296 4218616 - 102016242 AGCD01008091;AGCD01008092;AGCD01008093;AGCD01008094;GBBH01224044;GBCE01081633;XM_013507376 XP_013362830 MODEL 9038307 protein-coding Chn2 chimerin 2 NW_004955410 30711970 30988787 + 102012291 AGCD01011313;GBDI01328531;XM_005377472;XM_005377474;XM_005377475 XP_005377529;XP_005377531;XP_005377532 MODEL 8863730 protein-coding Xab2 XPA binding protein 2 INVOLVED IN blastocyst development (ortholog); cerebral cortex development (ortholog); DNA-templated transcription (ortholog); PARTICIPATES IN nucleotide excision repair pathway; spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955563 1630403 1638333 + 102030358 AGCD01074153;GBDF01051839;XM_005413180 XP_005413237 MODEL 8753358 protein-coding LOC102005187 zinc finger protein 432 NW_004955558 575848 589065 - 102005187 AGCD01073376;GBCE01115771;XM_005412661 XP_005412718 MODEL 8871839 pseudo LOC102025901 eukaryotic translation initiation factor 1 pseudogene NW_004955414 33467663 33468004 - 102025901 AGCD01015809 MODEL 8719457 ncrna LOC102018688 uncharacterized LOC102018688 NW_004955406 40043515 40046054 + 102018688 AGCD01006652;GBCQ01091085;XR_259528 MODEL 8925057 protein-coding Dclk2 doublecortin like kinase 2 ENCODES a protein that exhibits microtubule binding (ortholog); protein kinase activity (ortholog); INVOLVED IN hippocampus development (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955471 4903077 5044426 + 102019689 AGCD01053093;AGCD01053094;GBBH01132153;GBCE01135589;XM_005400882;XM_005400883;XM_005400884;XM_005400885 XP_005400939;XP_005400940;XP_005400941;XP_005400942 MODEL 9020868 protein-coding Ccdc83 coiled-coil domain containing 83 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955414 6982591 7029337 - 102017440 AGCD01014944;GBDI01165521;XM_005379766;XM_013511801;XM_013511802;XM_013511803;XM_013511804;XM_013511805;XM_013511806 XP_005379823;XP_013367255;XP_013367256;XP_013367257;XP_013367258;XP_013367259;XP_013367260 MODEL 730469598 snorna SNORA51 Small nucleolar RNA SNORA51 8955262 protein-coding Timm13 translocase of inner mitochondrial membrane 13 INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space chaperone complex (ortholog); mitochondrion (ortholog) NW_004955495 5781024 5782300 + 102013516 AGCD01062029;GBDF01047197;XM_005405902 XP_005405959 MODEL 39133240 snrna U4 U4 spliceosomal RNA 39134483 misc_rna 7SK 7SK RNA 8919715 ncrna LOC102012909 uncharacterized LOC102012909 NW_004955445 3519216 3530963 + 102012909 AGCD01039396;GBDF01083032;XR_262300 MODEL 8995308 protein-coding Eefsec eukaryotic elongation factor, selenocysteine-tRNA specific ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN selenium compound metabolic process (ortholog); selenocysteine incorporation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder (ortholog); chronic obstructive pulmonary disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); ribonucleoprotein complex (ortholog) NW_004955429 15381257 15598355 - 102026029 AGCD01028805;AGCD01028806;AGCD01028807;AGCD01028808;AGCD01028809;AGCD01028810;GBCQ01066156;XM_005387043;XM_005387044 XP_005387100;XP_005387101 MODEL 8959704 protein-coding LOC102003392 WAP four-disulfide core domain protein 10A NW_004955445 11634309 11635726 - 102003392 AGCD01039708;GBDF01230954;XM_005392420 XP_005392477 MODEL 8945118 protein-coding Dusp11 dual specificity phosphatase 11 ENCODES a protein that exhibits phosphatase activity (ortholog); polynucleotide 5'-phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955424 11978118 11990169 - 102011458 AGCD01024584;GBDK01239255;XM_005385545;XM_005385546 XP_005385602;XP_005385603 MODEL 8885347 ncrna LOC102005533 uncharacterized LOC102005533 NW_004955402 4830997 4925604 + 102005533 AGCD01000128;AGCD01000129;GBDF01177440;XR_001235012;XR_259028 MODEL 9029471 pseudo LOC102012518 mortality factor 4-like protein 2 NW_004955466 3112875 3113758 - 102012518 AGCD01050786 MODEL 8792967 protein-coding LOC102006248 olfactory receptor 1B1 NW_004955419 5318963 5319916 - 102006248 AGCD01019801;XM_005382524 XP_005382581 MODEL 9062899 pseudo LOC102007765 mitochondrial fission factor-like NW_004955416 10152452 10153091 + 102007765 AGCD01017109 MODEL 8821152 pseudo LOC102010443 calnexin pseudogene NW_004955405 3150890 3152245 - 102010443 AGCD01004631 MODEL 9013553 protein-coding Taf1d TATA-box binding protein associated factor, RNA polymerase I subunit D ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); RNA polymerase transcription factor SL1 complex (ortholog) NW_004955414 799124 806242 + 102020555 AGCD01014748;GBDF01189890;GBDF01189898;XM_005379694 XP_005379751 MODEL 8951694 protein-coding Pold2 DNA polymerase delta 2, accessory subunit ENCODES a protein that exhibits DNA polymerase binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA replication (ortholog); DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN delta DNA polymerase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955456 7853476 7860108 + 102021629 AGCD01046435;GBDF01080182;XM_005396671;XM_013520626 XP_005396728;XP_013376080 MODEL 8911885 protein-coding LOC102006625 ankyrin repeat domain-containing protein 26-like NW_004955582 71374 168669 + 102006625 AGCD01075741;AGCD01075742;AGCD01075743;AGCD01075744;AGCD01075745;AGCD01075746;AGCD01075747;GBDF01000111;XM_005414285 XP_005414342 MODEL 8951005 ncrna LOC102022014 uncharacterized LOC102022014 NW_004955438 1658563 1664283 - 102022014 AGCD01034986;GBDF01119763;XR_001235138 MODEL 9018582 protein-coding Ctsc cathepsin C ENCODES a protein that exhibits chloride ion binding (ortholog); cysteine-type peptidase activity (ortholog); dipeptidyl-peptidase activity (ortholog); INVOLVED IN negative regulation of myelination (ortholog); positive regulation of apoptotic signaling pathway (ortholog); positive regulation of microglial cell activation (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); aggressive periodontitis 1 (ortholog); allergic contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog) NW_004955414 5062355 5092631 + 102007990 AGCD01014888;GBDI01169299;GBDI01169301;XM_013511971 XP_013367425 MODEL 8725341 protein-coding Qtrt1 queuine tRNA-ribosyltransferase catalytic subunit 1 ENCODES a protein that exhibits tRNA-guanosine(34) queuine transglycosylase activity (ortholog); INVOLVED IN tRNA wobble guanine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955495 1851861 1857599 + 102008955 AGCD01061735;AGCD01061736;GBCE01028382;XM_005405610 XP_005405667 MODEL 8892055 protein-coding Exd1 exonuclease 3'-5' domain containing 1 INVOLVED IN piRNA processing (ortholog); regulatory ncRNA-mediated gene silencing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); stomach cancer (ortholog); FOUND IN PET complex (ortholog) NW_004955416 8032189 8089903 - 102004701 AGCD01017024;AGCD01017025;AGCD01017026;AGCD01017027;AGCD01017028;GBCQ01032561;GBDI01232396;XM_013512483 XP_013367937 MODEL 8924879 protein-coding Tsga10 testis specific 10 ENCODES a protein that exhibits structural molecule activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); motile cilium (ortholog) NW_004955470 5376749 5471904 - 102008086 AGCD01052749;AGCD01052750;AGCD01052751;GBDI01255512;XM_005400731;XM_005400734;XM_013522795;XM_013522796;XM_013522797;XM_013522799;XM_013522800 XP_005400788;XP_005400791;XP_013378249;XP_013378250;XP_013378251;XP_013378253;XP_013378254 MODEL 8883817 ncrna LOC102009295 uncharacterized LOC102009295 NW_004955424 20161293 20182303 - 102009295 AGCD01024845;GBDF01236664;XR_261089 MODEL 39131684 rrna 5S_rRNA 5S ribosomal RNA 8904442 protein-coding Ccdc85a coiled-coil domain containing 85A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN adherens junction (ortholog) NW_004955424 26756844 26934525 - 102003890 AGCD01025088;AGCD01025089;AGCD01025090;AGCD01025091;AGCD01025092;GBDK01316929;XM_005385762;XM_005385763;XM_005385764;XM_005385765;XM_005385766;XM_005385767;XM_005385768 XP_005385819;XP_005385820;XP_005385821;XP_005385822;XP_005385823;XP_005385824;XP_005385825 MODEL 8963640 protein-coding Lrrc63 leucine rich repeat containing 63 NW_004955518 3891612 3940698 + 102019727 AGCD01067811;AGCD01067812;AGCD01067813;AGCD01067814;AGCD01067815;GBDF01222845;XM_005409100;XM_005409101;XM_005409102;XM_005409103;XR_264570 XP_005409157;XP_005409158;XP_005409159;XP_005409160 MODEL 39134484 misc_rna 7SK 7SK RNA 9054152 protein-coding Depdc1b DEP domain containing 1B INVOLVED IN cell migration (ortholog); positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955446 7792778 7857218 + 102005980 AGCD01040130;AGCD01040131;AGCD01040132;GBDF01121403;XM_005392659;XM_005392660 XP_005392716;XP_005392717 MODEL 39132293 rrna 5S_rRNA 5S ribosomal RNA 8924612 protein-coding Ptgr3 prostaglandin reductase 3 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955402 58634433 58642498 - 102014848 AGCD01001535;AGCD01001536;AGCD01001537;GBBH01187216;GBCQ01006883;XM_005373085 XP_005373142 MODEL 8786018 protein-coding LOC102025178 uncharacterized LOC102025178 NW_004955546 1105712 1113339 + 102025178 AGCD01072041;GBDI01248776;XM_013508411;XM_013508412;XR_001232206 XP_013363865;XP_013363866 MODEL 9014539 protein-coding Calcoco2 calcium binding and coiled-coil domain 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of autophagosome maturation (ortholog); response to type II interferon (ortholog); xenophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 12443262 12469608 - 102030374 AGCD01043397;AGCD01043398;GBDJ01017568;XM_005394229;XM_013519115;XM_013519116;XM_013519117;XM_013519118;XR_001235948 XP_005394286;XP_013374569;XP_013374570;XP_013374571;XP_013374572 MODEL 10369625 ncrna LOC106147460 uncharacterized LOC106147460 NW_004955563 1609581 1610621 + 106147460 AGCD01074153;XR_001232372 MODEL 8817033 protein-coding Bbs5 Bardet-Biedl syndrome 5 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 5 (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centriolar satellite (ortholog) NW_004955449 5043034 5061806 - 102028919 AGCD01041906;GBDF01089344;XM_005393261;XM_005393262 XP_005393318;XP_005393319 MODEL 9034538 protein-coding Insm2 INSM transcriptional repressor 2 NW_004955409 25584543 25586025 - 102010456 AGCD01010118;GBDF01214949;XM_013510261 XP_013365715 MODEL 8792736 protein-coding Ell elongation factor for RNA polymerase II ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN aldosterone signaling pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) NW_004955524 3054296 3094125 + 102023388 AGCD01068853;AGCD01068854;GBDF01009023;XM_005409573 XP_005409630 MODEL 9058436 protein-coding LOC102006251 olfactory receptor 13C3-like NW_004955419 21880670 21881698 + 102006251 AGCD01020289;XM_013513142 XP_013368596 MODEL 8954913 protein-coding Rgn regucalcin ENCODES a protein that exhibits calcium ion binding (ortholog); gluconolactonase activity (ortholog); superoxide dismutase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); kidney development (ortholog); L-ascorbic acid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955516 958416 978829 - 102024267 AGCD01067406;AGCD01067407;GBDI01162056;XM_005408970;XM_005408971 XP_005409027;XP_005409028 MODEL 8706350 pseudo LOC102005191 WW domain-binding protein 5-like NW_004955445 15861773 15862606 + 102005191 AGCD01039857 MODEL 8881622 ncrna LOC102025902 uncharacterized LOC102025902 NW_004955415 5041744 5047128 - 102025902 AGCD01015989;GBBH01192973;XR_260268 MODEL 626189162 snorna SNORD49 Small nucleolar RNA SNORD49 730469580 snorna SNORA51 Small nucleolar RNA SNORA51 9009279 protein-coding Dclk3 doublecortin like kinase 3 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN negative regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955421 3593328 3618427 - 102029186 AGCD01021661;AGCD01021662;GBDK01281819;XM_013513810 XP_013369264 MODEL 8876263 protein-coding Copz1 coat protein complex I subunit zeta 1 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN COPI vesicle coat (ortholog) NW_004955458 1569077 1592851 + 102005567 AGCD01047193;GBDF01119095;XM_005397218 XP_005397275 MODEL 10070049 ncrna LOC106148550 uncharacterized LOC106148550 NW_004955423 25436707 25442213 + 106148550 AGCD01024075;GBDI01372861;XR_001234100;XR_001234101;XR_001234102 MODEL 9022984 protein-coding Timm17a translocase of inner mitochondrial membrane 17A ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955406 38020886 38031651 + 102020305 AGCD01006582;GBDF01003865;XM_005375197 XP_005375254 MODEL 39133927 misc_rna 7SK 7SK RNA 8956589 protein-coding LOC102012915 uncharacterized LOC102012915 NW_004955450 14986194 14993012 + 102012915 AGCD01042775;GBDF01058226;XM_013518836 XP_013374290 MODEL 9014257 ncrna LOC102003737 uncharacterized LOC102003737 NW_004955459 3075325 3077325 - 102003737 AGCD01048007;GBCQ01075158;XR_263012 MODEL 39131346 protein-coding RAMP1 receptor activity modifying protein 1 9016444 pseudo LOC102029808 heterogeneous nuclear ribonucleoprotein A3-like NW_004955449 5291155 5292270 - 102029808 AGCD01041926 MODEL 9065247 protein-coding Eeig1 estrogen-induced osteoclastogenesis regulator 1 INVOLVED IN positive regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); nucleus (ortholog) NW_004955419 707850 738763 + 102020669 AGCD01019607;AGCD01019608;GBDI01000094;GBDJ01174614;XM_005382390 XP_005382447 MODEL 8919745 protein-coding Chodl chondrolectin ENCODES a protein that exhibits hyaluronic acid binding (ortholog); INVOLVED IN regulation of neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955407 19483569 19507270 + 102014320 AGCD01007306;GBDI01221529;XM_005375582;XM_005375583 XP_005375639;XP_005375640 MODEL 8838920 protein-coding Xaf1 XIAP associated factor 1 ENCODES a protein that exhibits molecular sequestering activity (ortholog); INVOLVED IN negative regulation of protein-containing complex assembly (ortholog); negative regulation of type I interferon production (ortholog); response to interferon-beta (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955467 12240075 12257595 + 102009488 AGCD01051626;AGCD01051627;GBBH01163422;XM_005399676;XM_005399677 XP_005399733;XP_005399734 MODEL 8751490 protein-coding Shroom2 shroom family member 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical plasma membrane (ortholog) NW_004955499 8031961 8103307 + 102027320 AGCD01063614;AGCD01063615;AGCD01063616;GBCQ01149920;GBDJ01063804;XM_013505603;XM_013505604 XP_013361057;XP_013361058 MODEL 8758766 protein-coding LOC102005537 protein S100-A15A NW_004955592 62455 67295 + 102005537 AGCD01076300;XM_005414601 XP_005414658 MODEL 8798281 protein-coding Slc19a3 solute carrier family 19 member 3 ENCODES a protein that exhibits thiamine transmembrane transporter activity (ortholog); INVOLVED IN pyridoxine transport (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine transmembrane transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); basal ganglia disease (ortholog); biotin-responsive basal ganglia disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955453 6935372 6957808 + 102007731 AGCD01044734;GBDF01196023;XM_005395442;XM_013519971;XM_013519972;XM_013519973;XM_013519974;XM_013519975;XM_013519976;XM_013519977;XM_013519978 XP_005395499;XP_013375425;XP_013375426;XP_013375427;XP_013375428;XP_013375429;XP_013375430;XP_013375431;XP_013375432 MODEL 9041298 protein-coding S1pr3 sphingosine-1-phosphate receptor 3 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); inflammatory response (ortholog); negative regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN plasma membrane (ortholog); presynapse (ortholog) NW_004955515 3024258 3035996 - 102018012 AGCD01067267;GBCE01095063;XM_005408882 XP_005408939 MODEL 8873123 pseudo LOC102022018 poly [ADP-ribose] polymerase 6 pseudogene NW_004955543 115943 118540 - 102022018 AGCD01071557 MODEL 8769646 pseudo LOC102011246 rRNA-processing protein FCF1 homolog pseudogene NW_004955438 12170534 12171127 - 102011246 AGCD01035254 MODEL 9030246 protein-coding Ppl periplakin INVOLVED IN regulation of antibacterial peptide production (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); lateral plasma membrane (ortholog) NW_004955442 12581918 12627407 + 102029011 AGCD01037740;AGCD01037741;GBCE01133637;XM_005391258 XP_005391315 MODEL 8950912 protein-coding Bbs7 Bardet-Biedl syndrome 7 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN brain development (ortholog); eye development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 7 (ortholog); cone-rod dystrophy (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centrosome (ortholog) NW_004955428 18682072 18724560 + 102017686 AGCD01028069;GBDF01123997;XM_005386780;XM_005386781;XM_013515309;XM_013515310 XP_005386837;XP_005386838;XP_013370763;XP_013370764 MODEL 9032181 pseudo LOC102005195 arylacetamide deacetylase-like NW_004955448 2874204 2882455 - 102005195 AGCD01041291 MODEL 8984297 protein-coding Ctsd cathepsin D ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); aspartic-type peptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); execution phase of apoptosis (ortholog); PARTICIPATES IN ceramide signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog); endosome lumen (ortholog); endosome membrane (ortholog) NW_004955422 13576315 13584267 - 102028645 AGCD01022835;GBCB01005314;GBCE01002329;XM_005384179 XP_005384236 MODEL 8802510 protein-coding Arl11 ARF like GTPase 11 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955431 3086983 3090423 + 102026778 AGCD01029946;GBDK01151437;XM_005387598 XP_005387655 MODEL 9005137 protein-coding S1pr4 sphingosine-1-phosphate receptor 4 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); sphingosine-1-phosphate receptor signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrion (ortholog); presynapse (ortholog) NW_004955495 5243797 5247649 - 102026125 AGCD01061987;GBBH01024899;XM_005405851 XP_005405908 MODEL 8912261 protein-coding Tsga10ip testis specific 10 interacting protein NW_004955422 19372072 19389144 - 102022710 AGCD01023002;AGCD01023003;AGCD01023004;AGCD01023005;GBDF01008093;XM_005384439 XP_005384496 MODEL 8789286 pseudo LOC102012529 nicotinamide phosphoribosyltransferase-like NW_004955414 15004805 15007553 + 102012529 AGCD01015167 MODEL 8809432 pseudo LOC102018689 thymocyte nuclear protein 1 pseudogene NW_004955454 4953581 4954554 - 102018689 AGCD01045129 MODEL 8976803 protein-coding Ptgs1 prostaglandin-endoperoxide synthase 1 ENCODES a protein that exhibits oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); peroxidase activity (ortholog); prostaglandin-endoperoxide synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); learning (ortholog); maintenance of blood-brain barrier (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Abscess (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) NW_004955419 5678750 5699305 - 102008534 AGCD01019834;GBCQ01066127;XM_005382532;XM_013513294 XP_005382589;XP_013368748 MODEL 8864746 protein-coding LOC102007770 olfactory receptor 2T27-like NW_004955418 29729166 29730179 + 102007770 AGCD01019481;XM_005382359 XP_005382416 MODEL 8916423 pseudo LOC102024104 mth938 domain-containing protein pseudogene NW_004955466 13831017 13831425 + 102024104 AGCD01051187 MODEL 8861210 protein-coding Eeig2 EEIG family member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955435 12061112 12126310 + 102025163 AGCD01033133;AGCD01033134;GBBH01218671;XM_005389101 XP_005389158 MODEL 8980648 protein-coding Pold3 DNA polymerase delta 3, accessory subunit ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA-templated DNA replication (ortholog); error-prone translesion synthesis (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Colorectal Neoplasms (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); delta DNA polymerase complex (ortholog); nucleoplasm (ortholog) NW_004955414 17064379 17111946 - 102006120 AGCD01015233;AGCD01015234;GBDF01128109;XM_005379914;XM_005379915 XP_005379971;XP_005379972 MODEL 8865081 protein-coding Insr insulin receptor ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta clearance (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN altered insulin signaling pathway; altered leptin system pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); acute myeloid leukemia (ortholog); AIDS Dementia Complex (ortholog); FOUND IN caveola (ortholog); cell body (ortholog); dendrite (ortholog) NW_004955563 1867400 2011845 + 102016857 AGCD01074166;AGCD01074167;GBCB01025012;GBCE01008623;XM_013509165 XP_013364619 MODEL 9041622 protein-coding Taf2 TATA-box binding protein associated factor 2 ENCODES a protein that exhibits transcription cis-regulatory region binding (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 40 (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog); transcription factor TFIID complex (ortholog); transcription factor TFTC complex (ortholog) NW_004955417 25457615 25515923 - 102008103 AGCD01018482;AGCD01018483;AGCD01018484;AGCD01018485;GBBH01033252;GBDK01191649;XM_005381913 XP_005381970 MODEL 8969104 pseudo LOC102025903 cytochrome c oxidase subunit 7B, mitochondrial pseudogene NW_004955473 5730553 5730842 - 102025903 AGCD01053983 MODEL 8890093 protein-coding Foxa3 forkhead box A3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to starvation (ortholog); hematopoietic stem cell homeostasis (ortholog); intracellular glucose homeostasis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955574 293344 301955 + 102022649 AGCD01075097;GBDF01014072;XM_005413818;XM_005413819 XP_005413875;XP_005413876 MODEL 39133366 snorna SNORD5 Small nucleolar RNA SNORD5 8954218 pseudo LOC102003393 zinc finger protein 14-like NW_004955569 1162650 1186999 - 102003393 AGCD01074643;XM_005413495 MODEL 9042470 protein-coding Lrrc66 leucine rich repeat containing 66 ASSOCIATED WITH hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955447 18493752 18497789 + 102011710 AGCD01041175;GBCQ01014491;XM_005415352 XP_005415409 MODEL 10357882 ncrna LOC106148551 uncharacterized LOC106148551 NW_004955423 25470520 25475069 + 106148551 AGCD01024079;GBDK01117676;XR_001234103 MODEL 9049295 protein-coding Dusp12 dual specificity phosphatase 12 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of hexokinase activity (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955462 14555919 14565046 - 102016678 AGCD01049450;GBCB01001840;XM_005398286;XM_005398287;XM_013521439 XP_005398343;XP_005398344;XP_013376893 MODEL 8991063 protein-coding Ppm1a protein phosphatase, Mg2+/Mn2+ dependent 1A ENCODES a protein that exhibits calmodulin-dependent protein phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); neuron projection (ortholog) NW_004955466 9315227 9331213 - 102018273 AGCD01051034;GBCQ01042357;GBDF01218126;XM_013521996 XP_013377450 MODEL 8840529 pseudo LOC102003747 aldo-keto reductase family 1 member B10-like NW_004955467 4392827 4400286 + 102003747 AGCD01051366 MODEL 8948074 ncrna LOC102010445 uncharacterized LOC102010445 NW_004955406 13995073 13998877 - 102010445 AGCD01005956;GBDJ01024864;XR_001236437 MODEL 39131535 protein-coding RAMP2 receptor activity modifying protein 2 8865746 protein-coding Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ENCODES a protein that exhibits protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Abdominal Pain (ortholog); absence epilepsy (ortholog); acute myeloid leukemia (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); GATOR1 complex (ortholog) NW_004955455 5881631 6005514 + 102016020 AGCD01045758;AGCD01045759;AGCD01045760;AGCD01045761;AGCD01045762;AGCD01045763;GBDF01188888;XM_005396337;XM_005396338;XM_013520345;XM_013520346;XM_013520347;XM_013520348;XM_013520349;XM_013520350;XM_013520351;XM_013520352;XM_013520353;XM_013520354;XM_013520355;XM_013520356;XM_013520357 XP_005396394;XP_005396395;XP_013375799;XP_013375800;XP_013375801;XP_013375802;XP_013375803;XP_013375804;XP_013375805;XP_013375806;XP_013375807;XP_013375808;XP_013375809;XP_013375810;XP_013375811 MODEL 8742902 protein-coding Calcr calcitonin receptor ENCODES a protein that exhibits amylin receptor activity (ortholog); amyloid-beta binding (ortholog); calcitonin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); amylin receptor complex 1 (ortholog); amylin receptor complex 2 (ortholog) NW_004955432 10310776 10391029 - 102009867 AGCD01030930;GBCQ01059373;XM_005388037 XP_005388094 MODEL 9017093 protein-coding LOC102006633 keratin-associated protein 20-2-like NW_004955407 30151533 30151730 + 102006633 AGCD01007628;XM_005375639 XP_005375696 MODEL 39133243 snrna U4 U4 spliceosomal RNA 8783437 ncrna LOC102006252 uncharacterized LOC102006252 NW_004955486 9666236 9670686 - 102006252 AGCD01059195;GBDK01396724;XR_001231108;XR_001231109;XR_001231110;XR_001231111;XR_001231112;XR_263975;XR_263977 MODEL 8892147 protein-coding Rgp1 RGP1 partner of RAB6A GEF complex ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of protein catabolic process (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955472 550198 554038 - 102009375 AGCD01053340;GBBH01207777;GBDK01228476;XM_005401008 XP_005401065 MODEL 9046740 protein-coding Ell2 elongation factor for RNA polymerase II 2 INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); transcription elongation factor complex (ortholog) NW_004955418 16615340 16686632 + 102013295 AGCD01019127;AGCD01019128;GBDF01004410;XM_005382233 XP_005382290 MODEL 730469267 snorna SNORA51 Small nucleolar RNA SNORA51 8811905 protein-coding Qtrt2 queuine tRNA-ribosyltransferase accessory subunit 2 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN tRNA wobble guanine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955427 14139024 14169402 + 102008752 AGCD01027267;GBDF01111812;XM_005386411 XP_005386468 MODEL 9021760 protein-coding Exd2 exonuclease 3'-5' domain containing 2 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN DNA double-strand break processing (ortholog); double-strand break repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN chromosome (ortholog); mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog) NW_004955466 1114299 1169124 - 102029275 AGCD01050689;AGCD01050690;AGCD01050691;AGCD01050692;AGCD01050693;GBCE01153423;XM_005399039;XM_005399040 XP_005399096;XP_005399097 MODEL 39131685 rrna 5S_rRNA 5S ribosomal RNA 39132294 rrna 5S_rRNA 5S ribosomal RNA 9055653 pseudo LOC102011252 coiled-coil domain-containing protein 94 pseudogene NW_004955549 1407026 1453477 + 102011252 AGCD01072448;AGCD01072449 MODEL 9012127 protein-coding Ccdc85b coiled-coil domain containing 85B ENCODES a protein that exhibits delta-catenin binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of fat cell differentiation (ortholog); FOUND IN adherens junction (ortholog); centrosome (ortholog); nucleus (ortholog) NW_004955422 19432368 19433386 - 102023922 AGCD01023006;GBCB01019854;XM_005384443 XP_005384500 MODEL 8707549 protein-coding Timm17b translocase of inner mitochondrial membrane 17B ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955543 425076 430767 - 102027342 AGCD01071585;GBCE01032810;XM_005411288 XP_005411345 MODEL 8974590 protein-coding LOC102005196 uncharacterized LOC102005196 NW_004955448 10972348 11016806 + 102005196 AGCD01041508;AGCD01041509;AGCD01041510;GBDF01042677;XM_013518600 XP_013374054 MODEL 8834993 ncrna LOC102025180 uncharacterized LOC102025180 NW_004955441 15926164 15928611 + 102025180 AGCD01037262;GBDF01043836;XR_262089;XR_262090 MODEL 8883909 protein-coding Foxb1 forkhead box B1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon target recognition (ortholog); cell migration in diencephalon (ortholog); epithelial cell differentiation involved in mammary gland alveolus development (ortholog); FOUND IN nucleus (ortholog) NW_004955450 14867941 14902990 - 102012596 AGCD01042766;AGCD01042767;XM_005393895 XP_005393952 MODEL 8859537 protein-coding Ctse cathepsin E ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); protein autoprocessing (ortholog); proteolysis (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endosome (ortholog) NW_004955406 41641412 41653261 - 102015922 AGCD01006688;GBCQ01167818;XM_005375381;XM_005375382 XP_005375438;XP_005375439 MODEL 10388568 ncrna LOC106147461 uncharacterized LOC106147461 NW_004955563 1273169 1279640 - 106147461 AGCD01074138;GBCQ01152505;XR_001232373;XR_001232374;XR_001232375;XR_001232376;XR_001232377 MODEL 9023398 protein-coding Bbs9 Bardet-Biedl syndrome 9 INVOLVED IN cilium assembly (ortholog); fat cell differentiation (ortholog); protein localization to cilium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); ciliary membrane (ortholog) NW_004955582 222926 628514 + 102007287 AGCD01075751;AGCD01075752;AGCD01075753;AGCD01075754;AGCD01075755;AGCD01075756;AGCD01075757;AGCD01075758;AGCD01075759;AGCD01075760;AGCD01075761;AGCD01075762;AGCD01075763;AGCD01075764;AGCD01075765;AGCD01075766;AGCD01075767;AGCD01075768;AGCD01075769;AGCD01075770;GBCE01018725;GBDF01162296;XM_013509769 XP_013365223 MODEL 8899588 pseudo LOC102029809 mediator of RNA polymerase II transcription subunit 13-like NW_004955449 13906831 13924434 - 102029809 AGCD01042148;AGCD01042149;AGCD01042150;AGCD01042151 MODEL 8922542 protein-coding LOC102012916 tripartite motif-containing protein 60 NW_004955403 40239714 40250397 - 102012916 AGCD01002675;AGCD01002676;GBDF01161849;XM_005373589;XM_013515246;XM_013515248 XP_005373646;XP_013370700;XP_013370702 MODEL 8972957 protein-coding S1pr5 sphingosine-1-phosphate receptor 5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN regulation of neuron differentiation (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); systemic scleroderma (ortholog); FOUND IN presynapse (ortholog) NW_004955495 1717549 1722257 - 102007029 AGCD01061714;AGCD01061715;AGCD01061716;GBDI01108035;XM_013505132 XP_013360586 MODEL 8734583 protein-coding Xbp1 X-box binding protein 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); angiogenesis (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; forkhead class A signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); borna disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955455 3037885 3041827 - 102023773 AGCD01045609;GBDI01012427;GBDK01000036;XM_013520381 XP_013375835 MODEL 8876262 pseudo LOC102005539 integrin beta-1-like NW_004955602 28357 31946 + 102005539 AGCD01076761 MODEL 8784639 protein-coding Dusp14 dual specificity phosphatase 14 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955451 515889 537762 - 102023547 AGCD01042937;AGCD01042938;GBCE01077211;XM_005393924;XM_005393925;XM_005393926;XM_013519169;XM_013519170;XM_013519171 XP_005393981;XP_005393982;XP_005393983;XP_013374623;XP_013374624;XP_013374625 MODEL 8792406 pseudo LOC102009303 39S ribosomal protein L28, mitochondrial pseudogene NW_004955428 16029765 16030480 - 102009303 AGCD01028014 MODEL 8928170 pseudo LOC102022019 52 kDa repressor of the inhibitor of the protein kinase-like NW_004955439 8849377 8852363 - 102022019 AGCD01035814;AGCD01035815 MODEL 8892558 protein-coding Slc1a1 solute carrier family 1 member 1 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); D-aspartate transmembrane transporter activity (ortholog); glutamate binding (ortholog); INVOLVED IN adult behavior (ortholog); behavioral fear response (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Atrophy (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN apical dendrite (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955434 8790685 8879757 + 102024270 AGCD01032276;AGCD01032277;AGCD01032278;GBCE01069636;XM_005388636 XP_005388693 MODEL 8851554 protein-coding Copz2 coat protein complex I subunit zeta 2 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN COPI vesicle coat (ortholog) NW_004955451 13121271 13129256 + 102010016 AGCD01043450;GBCB01040035;XM_005394251 XP_005394308 MODEL 8865657 protein-coding Dclre1a DNA cross-link repair 1A ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); beta-lactamase activity (ortholog); INVOLVED IN nucleotide-excision repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955431 18812951 18831744 - 102012350 AGCD01030435;AGCD01030436;GBDI01323627;XM_005387808;XM_005387809 XP_005387865;XP_005387866 MODEL 39133928 misc_rna 7SK 7SK RNA 626189205 snorna SNORD50 Small nucleolar RNA SNORD50 8753350 pseudo LOC102003398 ubiquitin domain-containing protein 2 pseudogene NW_004955633 68363 69344 + 102003398 AGCD01077591 MODEL 9020512 protein-coding Chordc1 cysteine and histidine rich domain containing 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); calcium ion binding (ortholog); INVOLVED IN negative regulation of Rho protein signal transduction (ortholog); protein folding (ortholog); regulation of cellular response to heat (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic myeloid leukemia (ortholog); colon adenocarcinoma (ortholog) NW_004955414 3699652 3717200 + 102030623 AGCD01014838;AGCD01014839;GBCE01099244;XM_005379722 XP_005379779 MODEL 8762303 pseudo LOC102018690 voltage-dependent anion-selective channel protein 1 pseudogene NW_004955407 3264485 3268366 + 102018690 AGCD01006856;XR_259547 MODEL 8961022 protein-coding Shroom3 shroom family member 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) NW_004955433 1135589 1423449 + 102004844 AGCD01031348;AGCD01031349;AGCD01031350;AGCD01031351;AGCD01031352;AGCD01031353;AGCD01031354;AGCD01031355;AGCD01031356;GBBH01187068;XM_013516209 XP_013371663 MODEL 8833726 ncrna LOC102010449 uncharacterized LOC102010449 NW_004955408 9399013 9409596 + 102010449 AGCD01008249;GBDF01235295;XR_259676 MODEL 8833910 protein-coding Ptgs2 prostaglandin-endoperoxide synthase 2 ENCODES a protein that exhibits enzyme binding (ortholog); heme binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Abscess (ortholog); acute kidney failure (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955406 25077988 25086259 - 102014110 AGCD01006213;AGCD01006214;GBCQ01175625;GBDJ01276049;XM_005375091 XP_005375148 MODEL 39134485 misc_rna 7SK 7SK RNA 9041395 protein-coding LOC102024105 T-cell surface glycoprotein CD1b2-like NW_004955468 10193294 10196217 + 102024105 AGCD01052071;XM_005400146;XM_005400147 XP_005400203;XP_005400204 MODEL 8941886 protein-coding Depdc7 DEP domain containing 7 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog) NW_004955422 13167191 13189080 - 102023485 AGCD01022811;AGCD01022812;AGCD01022813;GBCQ01008642;XM_005384163 XP_005384220 MODEL 8856369 protein-coding Pold4 DNA polymerase delta 4, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); positive regulation of endothelial cell proliferation (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN delta DNA polymerase complex (ortholog); nucleus (ortholog) NW_004955422 18116604 18118280 + 102020020 AGCD01022937;GBDJ01139891;XM_005384335;XM_005384336 XP_005384392;XP_005384393 MODEL 39131424 protein-coding XBP1 X-box binding protein 1 8808835 protein-coding Rgr retinal G protein coupled receptor INVOLVED IN retinoid metabolic process (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN plasma membrane (ortholog) NW_004955510 3752118 3762251 + 102004738 AGCD01066247;XM_005407884 XP_005407941 MODEL 8856841 protein-coding Taf3 TATA-box binding protein associated factor 3 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); p53 binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 24263395 24414472 + 102009954 AGCD01022209;AGCD01022210;AGCD01022211;AGCD01022212;GBCQ01153140;XM_005383879;XM_005383880;XM_013513725 XP_005383936;XP_005383937;XP_013369179 MODEL 8777679 protein-coding Insrr insulin receptor related receptor ENCODES a protein that exhibits transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to alkaline pH (ortholog); male sex determination (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955545 2911691 2928335 - 102013450 AGCD01071929;AGCD01071930;GBCQ01038964;XM_013508211;XM_013508212;XM_013508213;XM_013508214;XM_013508215;XM_013508216 XP_013363665;XP_013363666;XP_013363667;XP_013363668;XP_013363669;XP_013363670 MODEL 9042612 protein-coding Arl13b ARF like GTPase 13B ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); cystic kidney disease (ortholog); genetic disease (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axoneme (ortholog); ciliary base (ortholog) NW_004955407 3402214 3477839 - 102017631 AGCD01006858;AGCD01006859;AGCD01006860;GBBH01003091;GBBH01003439;XM_005375514 XP_005375571 MODEL 8700369 protein-coding Tsga13 testis specific 13 ASSOCIATED WITH pheochromocytoma/paraganglioma syndrome 1 (ortholog); urinary bladder cancer (ortholog) NW_004955410 36964398 36982042 + 102009259 AGCD01011441;AGCD01011442;GBDF01010268;XM_005377551;XM_005377552;XM_005377553;XM_013510641 XP_005377608;XP_005377609;XP_005377610;XP_013366095 MODEL 9025248 pseudo LOC102012538 peroxiredoxin-6-like NW_004955482 9359566 9361203 + 102012538 AGCD01057566 MODEL 8747102 protein-coding Ccdc85c coiled-coil domain containing 85C INVOLVED IN cell population proliferation (ortholog); cerebral cortex development (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); cell junction (ortholog) NW_004955438 20851085 20909512 - 102017060 AGCD01035524;GBBH01164384;GBDI01220531;XM_005390452 XP_005390509 MODEL 8899113 protein-coding LOC102011255 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1233166 1237734 - 102011255 AGCD01074465;GBDF01000430;XM_005413374 XP_005413431 MODEL 8721741 pseudo LOC102007773 BAG family molecular chaperone regulator 5-like NW_004955484 8703188 8705376 + 102007773 AGCD01058394 MODEL 39131437 protein-coding FOXB1 forkhead box B1 8881083 pseudo LOC102003752 26S protease regulatory subunit 4 pseudogene NW_004955469 9387077 9396448 - 102003752 AGCD01052500;AGCD01052501 MODEL 8805499 protein-coding Ppm1b protein phosphatase, Mg2+/Mn2+ dependent 1B ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of defense response to virus (ortholog); negative regulation of interferon-beta production (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hypotonia-cystinuria syndrome (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955441 11276525 11338586 + 102029903 AGCD01037107;GBDF01043427;GBDF01043428;XM_005390941 XP_005390998 MODEL 8922235 protein-coding LOC102012918 atherin-like NW_004955452 3351568 3354575 - 102012918 AGCD01043921;GBDF01123090;XM_005394752;XM_013519519 XP_005394809;XP_013374973 MODEL 39133244 snrna U4 U4 spliceosomal RNA 9054931 protein-coding LOC102006635 keratin-associated protein 12-3-like NW_004955407 41624924 41625555 - 102006635 AGCD01007874;XM_013505462 XP_013360916 MODEL 8703566 pseudo LOC102006253 elongation factor 1-alpha 1-like NW_004955420 25364489 25376572 + 102006253 AGCD01021353;AGCD01021354 MODEL 8737268 protein-coding Calcrl calcitonin receptor like receptor ENCODES a protein that exhibits adrenomedullin binding (ortholog); adrenomedullin receptor activity (ortholog); calcitonin gene-related peptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); angiogenesis (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); brain infarction (ortholog); COVID-19 (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); CGRP receptor complex (ortholog); cytoplasm (ortholog) NW_004955403 11016753 11118494 + 102011931 AGCD01001945;AGCD01001946;AGCD01001947;AGCD01001948;GBDK01017484;XM_005373330;XM_005373331;XM_005373332;XM_005373333;XM_005373334;XM_013512405 XP_005373387;XP_005373388;XP_005373389;XP_005373390;XP_005373391;XP_013367859 MODEL 730469341 snorna SNORA51 Small nucleolar RNA SNORA51 9007427 pseudo LOC102025905 triosephosphate isomerase-like NW_004955474 6153045 6175838 + 102025905 AGCD01054451;AGCD01054452;AGCD01054453;AGCD01054454;AGCD01054455 MODEL 8943139 protein-coding Dclre1b DNA cross-link repair 1B ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); beta-lactamase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); protection from non-homologous end joining at telomere (ortholog); telomere capping (ortholog); ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); Autosomal Recessive Dyskeratosis Congenita 8 (ortholog); Fanconi anemia complementation group C (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); nuclear body (ortholog) NW_004955435 17173975 17179986 + 102029438 AGCD01033347;GBCQ01155004;XM_005389108 XP_005389165 MODEL 39131686 rrna 5S_rRNA 5S ribosomal RNA 8796808 protein-coding Ell3 elongation factor for RNA polymerase II 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA-templated transcription elongation (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription elongation factor complex (ortholog) NW_004955416 10223213 10226978 - 102011441 AGCD01017119;GBBH01198088;XM_005381405 XP_005381462 MODEL 8713997 protein-coding Slc1a2 solute carrier family 1 member 2 ENCODES a protein that exhibits glutamate:sodium symporter activity (ortholog); high-affinity L-glutamate transmembrane transporter activity (ortholog); L-cysteine transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); cellular response to cocaine (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN amyotrophic lateral sclerosis pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN astrocyte projection (ortholog); axolemma (ortholog); axon (ortholog) NW_004955422 10929987 11082220 + 102009619 AGCD01022749;GBDK01332009;XM_005384124;XM_005384125;XM_013514335 XP_005384181;XP_005384182;XP_013369789 MODEL 8730448 pseudo LOC102025184 vacuolar protein sorting-associated protein 45 pseudogene NW_004955443 208496 220334 + 102025184 AGCD01038092;AGCD01038093;AGCD01038094 MODEL 8832472 protein-coding Xcl1 X-C motif chemokine ligand 1 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell-cell signaling (ortholog); cellular response to interleukin-4 (ortholog); ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955462 8594416 8598101 - 102017550 AGCD01049322;GBDJ01337507;XM_005398206 XP_005398263 MODEL 8714588 protein-coding Timm21 translocase of inner mitochondrial membrane 21 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955402 57586651 57598817 + 102009241 AGCD01001501;GBDF01305105;XM_005373066;XR_259107;XR_259108 XP_005373123 MODEL 8921926 protein-coding Lrrc69 leucine rich repeat containing 69 ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955417 7875381 7969767 + 102015315 AGCD01018017;AGCD01018018;AGCD01018019;GBDF01082941;XM_005381774;XM_005381775;XM_005381776;XM_005381777 XP_005381831;XP_005381832;XP_005381833;XP_005381834 MODEL 8886135 pseudo LOC102029812 sorting nexin-2 pseudogene NW_004955748 339 3883 + 102029812 AGCD01078258;AGCD01078259 MODEL 8882929 protein-coding Bbx BBX high mobility group box domain containing ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN bone development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955427 8221339 8476405 + 102010713 AGCD01027068;AGCD01027069;AGCD01027070;AGCD01027071;AGCD01027072;AGCD01027073;AGCD01027074;GBBH01150536;XM_005386346;XM_005386349;XM_005386351;XM_005386352;XM_013515184;XM_013515185;XM_013515186;XM_013515187 XP_005386403;XP_005386406;XP_005386408;XP_005386409;XP_013370638;XP_013370639;XP_013370640;XP_013370641 MODEL 8754776 protein-coding Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 INVOLVED IN positive regulation of cholesterol efflux (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 7095977 7198632 - 102004788 AGCD01048478;AGCD01048479;GBDJ01033319;XM_005397768;XM_013521285 XP_005397825;XP_013376739 MODEL 39131478 protein-coding S1PR5 sphingosine-1-phosphate receptor 5 8905595 protein-coding LOC102005543 PRAME family member 20-like NW_004955615 219115 226336 + 102005543 AGCD01077251;XM_013510139 XP_013365593 MODEL 8932742 protein-coding Foxb2 forkhead box B2 NW_004955512 2380887 2382185 - 102010509 AGCD01066676;AGCD01066677;XM_005408326 XP_005408383 MODEL 8964960 protein-coding Pth parathyroid hormone ENCODES a protein that exhibits hormone activity (ortholog); parathyroid hormone receptor binding (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); bone resorption (ortholog); PARTICIPATES IN parathyroid hormone signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 28828389 28831417 - 102020327 AGCD01015689;GBDF01224218;XM_005380323 XP_005380380 MODEL 39133246 snrna U4 U4 spliceosomal RNA 8865238 ncrna LOC102022020 uncharacterized LOC102022020 NW_004955440 13712668 13726570 + 102022020 AGCD01036452;GBDF01045531;XR_262020;XR_262021 MODEL 8940667 protein-coding LOC102003753 olfactory receptor 51L1-like NW_004955414 21288601 21289554 + 102003753 AGCD01015411;XM_005380082 XP_005380139 MODEL 10342817 protein-coding Exd3 exonuclease 3'-5' domain containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955513 5314370 5336052 - 106147039 AGCD01066967;XM_013506584 XP_013362038 MODEL 39132295 rrna 5S_rRNA 5S ribosomal RNA 8887507 protein-coding LOC102024107 taste receptor type 2 member 140-like NW_004955413 8099439 8100275 - 102024107 AGCD01013846;XM_005379629 XP_005379686 MODEL 39133929 misc_rna 7SK 7SK RNA 8882684 protein-coding LOC102005199 small integral membrane protein 15-like NW_004955588 770792 771016 + 102005199 AGCD01076122;XM_005414524 XP_005414581 MODEL 10069460 ncrna LOC106148552 uncharacterized LOC106148552 NW_004955423 12093871 12099584 + 106148552 AGCD01023710;GBDK01032176;XR_001234104 MODEL 8712997 protein-coding Ramp2 receptor activity modifying protein 2 ENCODES a protein that exhibits adrenomedullin binding (ortholog); adrenomedullin receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adherens junction assembly (ortholog); adrenomedullin receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adult respiratory distress syndrome (ortholog); Cardiomegaly (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955451 16584742 16586093 + 102022993 AGCD01043695;GBCB01022684;GBDJ01020216;XM_005394475 XP_005394532 MODEL 10350548 protein-coding LOC106147462 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2-like NW_004955564 2079465 2093223 - 106147462 AGCD01074257;AGCD01074258;AGCD01074259;GBDF01251090;XM_013509196 XP_013364650 MODEL 8997221 protein-coding Ctsf cathepsin F ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955422 18794207 18799245 + 102007564 AGCD01022961;GBDF01006473;XM_013514058 XP_013369512 MODEL 8847508 pseudo LOC102018692 coiled-coil domain-containing protein 152-like NW_004955457 9051097 9052057 + 102018692 AGCD01046927 MODEL 8710200 protein-coding LOC102025187 zinc finger protein 709-like NW_004955569 27899 63427 + 102025187 AGCD01074557;AGCD01074558;GBCE01006195;XM_005413488 XP_005413545 MODEL 9066159 protein-coding Dclre1c DNA cross-link repair 1C ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); single-stranded DNA endonuclease activity (ortholog); INVOLVED IN B cell differentiation (ortholog); chromosome organization (ortholog); DNA recombination (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nonhomologous end joining complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955429 19461446 19501908 + 102006802 AGCD01028960;AGCD01028961;AGCD01028962;AGCD01028963;GBBH01180586;XM_005387152 XP_005387209 MODEL 8991411 protein-coding Chp1 calcineurin like EF-hand protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); kinase binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); intracellular sodium ion homeostasis (ortholog); membrane docking (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cation-transporting ATPase complex (ortholog); cytoplasm (ortholog); endomembrane system (ortholog) NW_004955416 8090034 8131605 + 102004381 AGCD01017028;AGCD01017029;AGCD01017030;AGCD01017031;GBDF01003296;XM_013512484 XP_013367938 MODEL 39134486 misc_rna 7SK 7SK RNA 8765133 protein-coding Shroom4 shroom family member 4 ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament organization (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); intellectual disability (ortholog); lymphoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical plasma membrane (ortholog) NW_004955543 1810125 2046144 - 102017704 AGCD01071632;AGCD01071633;AGCD01071634;AGCD01071635;AGCD01071636;AGCD01071637;AGCD01071638;AGCD01071639;AGCD01071640;GBDJ01421933;XM_013508168 XP_013363622 MODEL 8757567 protein-coding R3hcc1 R3H domain and coiled-coil containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lymphoma (ortholog) NW_004955403 46482255 46502194 + 102017622 AGCD01002860;GBDF01003219;XM_005373697;XM_013513971 XP_005373754;XP_013369425 MODEL 9054227 protein-coding LOC102009305 olfactory receptor 1030-like NW_004955511 1711783 1712721 + 102009305 AGCD01066377;XM_005407973 XP_005408030 MODEL 8976129 protein-coding LOC102012925 myotubularin-related protein 3 NW_004955455 4120714 4264635 + 102012925 AGCD01045667;AGCD01045668;AGCD01045669;AGCD01045670;AGCD01045671;AGCD01045672;AGCD01045673;GBDF01118467;XM_005396228;XM_005396229;XM_005396230;XM_005396231;XM_005396232;XM_005396233;XM_005396234;XM_005396235;XM_005396237;XM_005396238;XM_005396239 XP_005396285;XP_005396286;XP_005396287;XP_005396288;XP_005396289;XP_005396290;XP_005396291;XP_005396292;XP_005396294;XP_005396295;XP_005396296 MODEL 730469347 snorna SNORD50 Small nucleolar RNA SNORD50 8854423 protein-coding Poldip2 DNA polymerase delta interacting protein 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN error-free translesion synthesis (ortholog); mitochondrion organization (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); midbody (ortholog); mitochondrial matrix (ortholog) NW_004955481 4776721 4785817 + 102006912 AGCD01056952;GBDF01009609;GBDI01062561;XM_005402761 XP_005402818 MODEL 10084596 protein-coding Foxd1 forkhead box D1 ENCODES a protein that exhibits DNA binding (ortholog); DNA binding, bending (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon guidance (ortholog); branching involved in ureteric bud morphogenesis (ortholog); canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH breast cancer (ortholog) NW_004955425 27158601 27159447 + 106148614 AGCD01025964;GBCE01007616;XM_013514755 XP_013370209 MODEL 8785843 protein-coding Rgs1 regulator of G protein signaling 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); leukotriene signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Arsenic Poisoning (ortholog); COVID-19 (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955406 30042354 30047172 + 102017535 AGCD01006357;GBDK01060690;XM_005375098 XP_005375155 MODEL 9057954 protein-coding Taf4 TATA-box binding protein associated factor 4 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 73 (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromatin (ortholog); MLL1 complex (ortholog); nucleoplasm (ortholog) NW_004955528 1951952 2020592 + 102013646 AGCD01069580;GBBH01127372;GBCQ01129362;XM_013507495 XP_013362949 MODEL 9040056 protein-coding LOC102024108 olfactory receptor 51F1-like NW_004955414 20369929 20370864 - 102024108 AGCD01015371;XM_005380471 XP_005380528 MODEL 8961019 protein-coding LOC102003754 olfactory receptor 2AG1-like NW_004955414 22578726 22579673 + 102003754 AGCD01015464;XM_005380177 XP_005380234 MODEL 8901695 protein-coding Ccdc86 coiled-coil domain containing 86 INVOLVED IN chromosome segregation (ortholog); mitotic nuclear division (ortholog); ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955511 5533895 5535984 + 102030655 AGCD01066567;GBCQ01128476;GBDF01162536;XM_013506511 XP_013361965 MODEL 9014005 protein-coding Xg Xg glycoprotein (Xg blood group) ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955499 1654037 1684150 + 102010921 AGCD01063377;AGCD01063378;AGCD01063379;GBDI01371761;XM_013505593;XM_013505594;XM_013505596;XM_013505597 XP_013361047;XP_013361048;XP_013361050;XP_013361051 MODEL 8938501 protein-coding Tshb thyroid stimulating hormone subunit beta INVOLVED IN response to calcium ion (ortholog); response to estrogen (ortholog); response to vitamin A (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Coma (ortholog); congenital nongoitrous hypothyroidism 4 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 18316585 18339935 + 102023390 AGCD01033400;AGCD01033401;AGCD01033402;AGCD01033403;GBDF01010175;XM_005389018;XM_005389019;XM_013516550 XP_005389075;XP_005389076;XP_013372004 MODEL 8977515 pseudo LOC102007778 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955488 8069378 8071802 - 102007778 AGCD01059700 MODEL 8744818 protein-coding LOC102011261 vomeronasal type-1 receptor 4-like NW_004955584 575353 576579 - 102011261 AGCD01075948;XM_005414368 XP_005414425 MODEL 8860751 protein-coding LOC102010451 olfactory receptor 1361-like NW_004955408 1580644 1581941 + 102010451 AGCD01007965;XM_005376561 XP_005376618 MODEL 8961483 ncrna LOC102018695 uncharacterized LOC102018695 NW_004955458 9885317 9887026 - 102018695 AGCD01047664;GBDK01334184;XR_262992 MODEL 8736408 protein-coding Coq10a coenzyme Q10A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 3878844 3880429 + 102006318 AGCD01047353;GBDI01174975;GBDJ01165173;XM_005397302 XP_005397359 MODEL 8998886 protein-coding Saal1 serum amyloid A like 1 INVOLVED IN positive regulation of synoviocyte proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 32853291 32868061 - 102015191 AGCD01015784;GBDJ01386150;XM_005380399 XP_005380456 MODEL 8777477 ncrna LOC102005544 uncharacterized LOC102005544 NW_004955403 19218644 19229973 + 102005544 AGCD01002120;GBDF01056356;XR_001233395 MODEL 730469035 snorna SNORA51 Small nucleolar RNA SNORA51 9030971 protein-coding Arl14 ARF like GTPase 14 NW_004955448 11182120 11183142 + 102005531 AGCD01041517;GBCQ01188521;XM_005393124 XP_005393181 MODEL 39131687 rrna 5S_rRNA 5S ribosomal RNA 8767706 ncrna LOC102012930 uncharacterized LOC102012930 NW_004955408 11342486 11344637 + 102012930 AGCD01008307;GBDF01286807;XR_259678 MODEL 8964609 pseudo LOC102005201 phosphatase and actin regulator 4 pseudogene NW_004955591 755440 812129 - 102005201 AGCD01076284;AGCD01076285;AGCD01076286 MODEL 8744261 pseudo LOC102012540 ubiquitin carboxyl-terminal hydrolase 28 pseudogene NW_004955485 2178951 2183590 - 102012540 AGCD01058507;XM_005403918 MODEL 9016982 protein-coding Timm22 translocase of inner mitochondrial membrane 22 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN carrier pathway of mitochondrial protein import; ASSOCIATED WITH colon adenocarcinoma (ortholog); combined oxidative phosphorylation deficiency 43 (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM22 mitochondrial import inner membrane insertion complex (ortholog) NW_004955481 2494943 2501532 + 102029078 AGCD01056876;GBDF01153078;XM_005402649 XP_005402706 MODEL 10095146 ncrna LOC106148553 uncharacterized LOC106148553 NW_004955423 12284347 12414452 - 106148553 AGCD01023717;AGCD01023718;XR_001234105 MODEL 8945095 protein-coding Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to starvation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; p38 MAPK signaling pathway; p53 signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); Arnold-Chiari Malformation (ortholog); astigmatism (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955451 1878110 1915794 + 102008169 AGCD01042992;AGCD01042993;AGCD01042994;AGCD01042995;AGCD01042996;AGCD01042997;AGCD01042998;GBDF01009582;GBDF01009585;XM_005393964 XP_005394021 MODEL 8979735 ncrna LOC102006638 uncharacterized LOC102006638 NW_004955409 9973340 9976636 - 102006638 AGCD01009449;GBDF01306881;XR_259765 MODEL 8781407 protein-coding Depp1 DEPP autophagy regulator 1 INVOLVED IN regulation of autophagy (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); endometriosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); peroxisome (ortholog) NW_004955546 2291829 2293375 - 102013551 AGCD01072084;GBCB01025706;XM_005411783 XP_005411840 MODEL 8797202 protein-coding LOC102025908 uncharacterized LOC102025908 NW_004955478 5680983 5685037 - 102025908 AGCD01055883;AGCD01055884;GBDJ01293934;XM_005402291 XP_005402348 MODEL 9056963 pseudo LOC102006254 rab11 family-interacting protein 5-like NW_004955421 18213737 18219501 - 102006254 AGCD01022039 MODEL 9032080 protein-coding Bcam basal cell adhesion molecule (Lutheran blood group) ENCODES a protein that exhibits laminin binding (ortholog); laminin receptor activity (ortholog); INVOLVED IN cell adhesion (ortholog); cell-matrix adhesion (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955555 1943445 1950810 + 102027119 AGCD01073118;GBBH01004296;GBDI01013618;XM_013508693 XP_013364147 MODEL 8787094 protein-coding Efcab11 EF-hand calcium binding domain 11 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955438 12269610 12420775 - 102011046 AGCD01035256;AGCD01035257;GBDF01157581;XM_005390275;XM_013517275;XM_013517276;XM_013517277;XM_013517278 XP_005390332;XP_013372729;XP_013372730;XP_013372731;XP_013372732 MODEL 8989146 pseudo LOC102010453 adenosine kinase pseudogene NW_004955458 14363282 14364041 - 102010453 AGCD01047832 MODEL 8848489 protein-coding Dcn decorin ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN kidney development (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell migration (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH asthma (ortholog); breast carcinoma (ortholog); congenital stromal corneal dystrophy (ortholog); FOUND IN collagen type VI trimer (ortholog); extracellular region (ortholog) NW_004955405 28335493 28371912 - 102019976 AGCD01005235;AGCD01005236;GBCE01001609;XM_005374450;XM_005374451 XP_005374507;XP_005374508 MODEL 8788630 protein-coding Pth1r parathyroid hormone 1 receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); parathyroid hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; parathyroid hormone signaling pathway; ASSOCIATED WITH brachydactyly type E1 (ortholog); chondrodysplasia Blomstrand type (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955420 25274269 25291984 - 102019506 AGCD01021348;GBDF01221234;XM_013513585 XP_013369039 MODEL 8771752 protein-coding LOC102009306 olfactory receptor 10AG1-like NW_004955511 845267 846223 - 102009306 AGCD01066345;XM_005408213 XP_005408270 MODEL 8770067 protein-coding Shtn1 shootin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cell adhesion molecule binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle retrograde transport (ortholog); axonogenesis (ortholog); Cdc42 protein signal transduction (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); cell leading edge (ortholog) NW_004955431 21653415 21734160 - 102027776 AGCD01030496;GBCQ01149394;XM_005387870;XM_013515871 XP_005387927;XP_013371325 MODEL 39132298 rrna 5S_rRNA 5S ribosomal RNA 8702607 protein-coding LOC102022022 olfactory receptor 4K2-like NW_004955550 506630 507583 - 102022022 AGCD01072509;XM_005412132 XP_005412189 MODEL 8804403 protein-coding LOC102018698 laminin subunit beta-4 NW_004955410 12319755 12419631 - 102018698 AGCD01010852;AGCD01010853;AGCD01010854;AGCD01010855;AGCD01010856;AGCD01010857;GBDK01203911;XM_013510493 XP_013365947 MODEL 8894233 protein-coding Elmo1 engulfment and cell motility 1 ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based process (ortholog); cell motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); guanyl-nucleotide exchange factor complex (ortholog) NW_004955460 6044827 6580770 + 102028385 AGCD01048466;AGCD01048467;AGCD01048468;AGCD01048469;AGCD01048470;AGCD01048471;GBCQ01162510;XM_005397755;XM_013521230;XM_013521231;XM_013521232 XP_005397812;XP_013376684;XP_013376685;XP_013376686 MODEL 8774641 protein-coding Exo1 exonuclease 1 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN DNA recombination (ortholog); DNA strand resection involved in replication fork processing (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; mismatch repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 10248981 10276207 - 102016665 AGCD01005851;GBDF01014333;XM_005374813;XM_005374814;XM_005374815;XM_013520497;XM_013520501 XP_005374870;XP_005374871;XP_005374872;XP_013375951;XP_013375955 MODEL 8899166 protein-coding Slc1a3 solute carrier family 1 member 3 ENCODES a protein that exhibits acidic amino acid transmembrane transporter activity (ortholog); amino acid binding (ortholog); glutamate binding (ortholog); INVOLVED IN auditory behavior (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell periphery (ortholog) NW_004955426 21371985 21450749 + 102012877 AGCD01026587;GBDI01024508;XM_005386210;XM_013514995 XP_005386267;XP_013370449 MODEL 8908758 protein-coding LOC102029814 uncharacterized LOC102029814 NW_004955961 625 13893 + 102029814 AGCD01078752;AGCD01078753;AGCD01078754;AGCD01078755;XM_005415154 XP_005415211 MODEL 10340622 ncrna LOC106147463 uncharacterized LOC106147463 NW_004955408 23159296 23162095 + 106147463 AGCD01008584;GBCQ01078839;XR_001232382 MODEL 8712598 protein-coding Lrrc7 leucine rich repeat containing 7 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN clustering of voltage-gated calcium channels (ortholog); positive regulation of neuron projection development (ortholog); regulation of long-term synaptic depression (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal dominant intellectual developmental disorder 77 (ortholog); cocaine dependence (ortholog); FOUND IN actin cytoskeleton (ortholog); axon initial segment (ortholog); cytoplasm (ortholog) NW_004955423 21764046 22269590 - 102009075 AGCD01023948;AGCD01023949;AGCD01023950;AGCD01023951;AGCD01023952;AGCD01023953;AGCD01023954;AGCD01023955;AGCD01023956;AGCD01023957;AGCD01023958;AGCD01023959;AGCD01023960;AGCD01023961;GBCE01048900;XM_013514395;XM_013514396;XM_013514397 XP_013369849;XP_013369850;XP_013369851 MODEL 8719926 pseudo LOC102012938 60S ribosomal protein L37a-like NW_004955464 13764223 13764774 + 102012938 AGCD01050293 MODEL 8819607 protein-coding Ctsh cathepsin H ENCODES a protein that exhibits aminopeptidase activity (ortholog); cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); bradykinin catabolic process (ortholog); cellular response to thyroid hormone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); alveolar lamellar body (ortholog); axoneme (ortholog) NW_004955533 39237 54881 - 102012024 AGCD01070311;GBDK01013472;XM_005410376;XM_013507687 XP_005410433;XP_013363141 MODEL 8701934 pseudo LOC102025191 60S ribosomal protein L23a pseudogene NW_004955578 358817 360090 + 102025191 AGCD01075477 MODEL 8921357 protein-coding Cald1 caldesmon 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); positive regulation of protein binding (ortholog); ASSOCIATED WITH Acute Otitis Media; cholangiocarcinoma (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN actin cap (ortholog); actin cytoskeleton (ortholog); actin filament (ortholog) NW_004955494 7578162 7675558 - 102016067 AGCD01061553;GBCQ01003575;XM_005405503;XM_013504981;XM_013504982;XM_013504983;XM_013504984;XM_013504985 XP_005405560;XP_013360435;XP_013360436;XP_013360437;XP_013360438;XP_013360439 MODEL 8876781 protein-coding Insyn1 inhibitory synaptic factor 1 INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); inhibitory postsynaptic potential (ortholog); postsynaptic specialization organization (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic specialization (ortholog) NW_004955450 3857563 3867905 + 102023094 AGCD01042446;GBDJ01311313;XM_005393590 XP_005393647 MODEL 8881076 protein-coding LOC102003401 protein MTO1 homolog, mitochondrial-like NW_004955981 5824 8486 + 102003401 AGCD01078801;AGCD01078802;XM_013510212 XP_013365666 MODEL 8930496 protein-coding LOC102005547 breast cancer type 1 susceptibility protein homolog NW_004956027 800 5983 - 102005547 AGCD01078904;GBBH01191619;GBCQ01157973;XM_005415162 XP_005415219 MODEL 8990404 protein-coding Coq10b coenzyme Q10B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955403 3080945 3090978 - 102024750 AGCD01001747;GBCB01073806;GBCE01074854;XM_013512067 XP_013367521 MODEL 8916523 protein-coding Foxd2 forkhead box D2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); kidney failure (ortholog); nephrotic syndrome (ortholog) NW_004955464 11117677 11120663 - 102029488 AGCD01050135;AGCD01050136;GBCQ01139279;XM_005398780 XP_005398837 MODEL 8886272 ncrna LOC102005202 uncharacterized LOC102005202 NW_004955599 391655 395193 + 102005202 AGCD01076643;AGCD01076644;GBCB01040783;XR_001232557;XR_001232558 MODEL 8927290 protein-coding Ccdc87 coiled-coil domain containing 87 INVOLVED IN positive regulation of acrosome reaction (ortholog); positive regulation of fertilization (ortholog) NW_004955422 18772869 18775548 + 102006470 AGCD01022960;GBDF01086002;XM_005384386 XP_005384443 MODEL 8839203 protein-coding Taf4b TATA-box binding protein associated factor 4b ENCODES a protein that exhibits DNA binding (ortholog); NF-kappaB binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of stem cell proliferation (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955402 14296202 14425298 + 102020862 AGCD01000424;AGCD01000425;AGCD01000426;AGCD01000427;AGCD01000428;GBDF01013559;GBDF01013560;XM_013505611 XP_013361065 MODEL 8859305 protein-coding LOC102011263 cornifin-B NW_004955592 410702 412632 - 102011263 AGCD01076312;GBCC01001188;XM_005414616 XP_005414673 MODEL 9035741 protein-coding Tshr thyroid stimulating hormone receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); protein-containing complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH adenoma (ortholog); Adrenal Gland Neoplasms (ortholog); autoimmune thyroiditis (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955438 4601765 4758922 + 102024276 AGCD01035046;AGCD01035047;AGCD01035048;GBDF01190268;XM_005390231;XM_005390232;XM_005390233;XM_013517232;XM_013517233 XP_005390288;XP_005390289;XP_005390290;XP_013372686;XP_013372687 MODEL 39133249 snrna U4 U4 spliceosomal RNA 39134487 misc_rna 7SK 7SK RNA 9021421 protein-coding Ppm1e protein phosphatase, Mg2+/Mn2+ dependent 1E ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to xenobiotic stimulus (ortholog); positive regulation of stress fiber assembly (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955451 3989575 4137400 - 102018877 AGCD01043087;AGCD01043088;AGCD01043089;AGCD01043090;AGCD01043091;AGCD01043092;GBDF01190593;XM_005393998 XP_005394055 MODEL 8707896 protein-coding R3hcc1l R3H domain and coiled-coil containing 1 like ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN exon-exon junction complex (ortholog) NW_004955507 4150389 4228412 + 102011345 AGCD01065640;AGCD01065641;AGCD01065642;GBDF01123772;XM_005407656;XM_005407657;XM_005407659;XM_005407660 XP_005407713;XP_005407714;XP_005407716;XP_005407717 MODEL 39133930 misc_rna 7SK 7SK RNA 9019314 pseudo LOC102006259 programmed cell death protein 5 pseudogene NW_004955502 7085665 7086085 - 102006259 AGCD01064429;XM_005406906 MODEL 616940618 snorna SNORD51 Small nucleolar RNA SNORD51 8851335 protein-coding Dcp1a decapping mRNA 1A ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); identical protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN mRNA methylguanosine-cap decapping (ortholog); protein localization to cytoplasmic stress granule (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); dendrite (ortholog) NW_004955430 3225840 3284058 - 102004100 AGCD01029199;GBDF01225893;XM_005387374;XM_013515611 XP_005387431;XP_013371065 MODEL 9007304 protein-coding Arl14ep ARF like GTPase 14 effector protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog) NW_004955476 8858387 8868504 + 102019595 AGCD01055375;GBBH01064977;GBCB01024452;XM_005401762 XP_005401819 MODEL 8837536 protein-coding Ramp3 receptor activity modifying protein 3 ENCODES a protein that exhibits adrenomedullin receptor activity (ortholog); amylin receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); amylin receptor 3 signaling pathway (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); amylin receptor complex 3 (ortholog); cell surface (ortholog) NW_004955456 7159845 7168718 - 102014115 AGCD01046391;GBBH01141274;XM_005396645 XP_005396702 MODEL 9015813 protein-coding Pth2 parathyroid hormone 2 NW_004955559 1409966 1414881 + 102017514 AGCD01073644;GBDF01104303;XM_005412886;XM_013509049 XP_005412943;XP_013364503 MODEL 39131688 rrna 5S_rRNA 5S ribosomal RNA 39132300 rrna 5S_rRNA 5S ribosomal RNA 9003751 protein-coding LOC102003755 uncharacterized LOC102003755 NW_004955470 10483806 10485953 - 102003755 AGCD01052870;GBDF01294395;XM_005400841 XP_005400898 MODEL 9057948 ncrna LOC102012541 uncharacterized LOC102012541 NW_004955420 22215125 22224734 - 102012541 AGCD01021189;GBDJ01422894;XR_260735 MODEL 8995606 protein-coding LOC102007781 cytochrome b-c1 complex subunit 2, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 5 (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955493 655619 689705 + 102007781 AGCD01060859;GBDF01004785;XM_005405054 XP_005405111 MODEL 8783943 protein-coding LOC102024110 nucleolin-like NW_004955475 4819884 4825301 + 102024110 AGCD01054894;XM_005401704 XP_005401761 MODEL 10257719 ncrna LOC106148554 uncharacterized LOC106148554 NW_004955423 12290807 12298619 + 106148554 AGCD01023717;GBDF01147926;XR_001234106 MODEL 8789528 protein-coding Timm23b translocase of inner mitochondrial membrane 23 homolog B FOUND IN mitochondrion (ortholog) NW_004955556 414345 435182 - 102025949 AGCD01073175;GBDJ01378436;XM_005412558 XP_005412615 MODEL 8888205 protein-coding Chp2 calcineurin like EF-hand protein 2 ENCODES a protein that exhibits calcium ion binding (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); thymoma (ortholog); FOUND IN cation-transporting ATPase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955493 2278494 2281125 + 102015021 AGCD01060943;GBCE01072558;GBDF01158981;XM_005405340 XP_005405397 MODEL 8969750 ncrna LOC102025192 uncharacterized LOC102025192 NW_004955402 9308678 9320535 + 102025192 AGCD01000213;GBDF01192767;XR_259045 MODEL 8834702 protein-coding Ctsk cathepsin K ENCODES a protein that exhibits collagen binding (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN bone resorption (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Acro-Osteolysis (ortholog); Alveolar Bone Loss (ortholog); Bone Fractures (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955588 149036 158093 - 102015468 AGCD01076093;AGCD01076094;GBDK01394350;XM_005414457 XP_005414514 MODEL 8872126 protein-coding Poldip3 DNA polymerase delta interacting protein 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN poly(A)+ mRNA export from nucleus (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nuclear speck (ortholog) NW_004955413 27944109 27968156 - 102011755 AGCD01014538;AGCD01014539;GBBH01060544;XM_005379420 XP_005379477 MODEL 9014751 protein-coding Efcab12 EF-hand calcium binding domain 12 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); colon adenocarcinoma (ortholog) NW_004955429 17870292 17877846 + 102015033 AGCD01028868;GBBH01141216;GBDI01225653;XM_005387094 XP_005387151 MODEL 9031964 protein-coding Sac3d1 SAC3 domain containing 1 INVOLVED IN centrosome duplication (ortholog); negative regulation of receptor signaling pathway via JAK-STAT (ortholog); regulation of immune response (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); microtubule cytoskeleton (ortholog); nucleus (ortholog) NW_004955422 20146359 20149152 - 102021361 AGCD01023067;AGCD01023068;GBBH01082267;GBCE01123690;XM_013514235 XP_013369689 MODEL 8721567 protein-coding Chpf chondroitin polymerizing factor ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrial matrix (ortholog) NW_004955453 13932822 13937587 + 102029261 AGCD01044855;GBCQ01040789;XM_005395509 XP_005395566 MODEL 730469025 snorna SNORA51 Small nucleolar RNA SNORA51 8909570 ncrna LOC102009308 uncharacterized LOC102009308 NW_004955431 13033825 13037782 - 102009308 AGCD01030276;GBDF01225489;XR_001234590 MODEL 8823308 protein-coding Insyn2a inhibitory synaptic factor 2A INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); inhibitory postsynaptic potential (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic specialization (ortholog) NW_004955477 4945431 5003381 - 102012425 AGCD01055589;GBDF01261199;XM_005402006;XM_005402007;XM_005402008 XP_005402063;XP_005402064;XP_005402065 MODEL 9061217 protein-coding Xiap X-linked inhibitor of apoptosis ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); defense response to bacterium (ortholog); DNA damage response (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; intrinsic apoptotic pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955473 10823795 10878256 - 102029504 AGCD01054116;AGCD01054117;GBBH01094341;GBCE01183072;XM_013523059 XP_013378513 MODEL 8720600 pseudo LOC102018700 receptor-type tyrosine-protein phosphatase alpha pseudogene NW_004955411 21173967 21176388 - 102018700 AGCD01012069 MODEL 8987502 protein-coding R3hdm1 R3H domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955440 2908721 3076522 + 102008573 AGCD01036228;AGCD01036229;AGCD01036230;AGCD01036231;GBDF01053670;XM_013517471;XM_013517472;XM_013517473;XM_013517474;XM_013517475;XM_013517476;XM_013517477;XM_013517478;XM_013517479 XP_013372925;XP_013372926;XP_013372927;XP_013372928;XP_013372929;XP_013372930;XP_013372931;XP_013372932;XP_013372933 MODEL 8750669 protein-coding Elmo2 engulfment and cell motility 2 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); positive regulation of dendritic spine morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Epistaxis (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955445 10943838 10982653 + 102018868 AGCD01039680;GBCE01117628;XM_005392377;XM_005392380 XP_005392434;XP_005392437 MODEL 8926564 protein-coding Slc1a4 solute carrier family 1 member 4 ENCODES a protein that exhibits chloride channel activity (ortholog); L-alanine transmembrane transporter activity (ortholog); L-aspartate transmembrane transporter activity (ortholog); INVOLVED IN cognition (ortholog); hydroxyproline transport (ortholog); L-alanine import across plasma membrane (ortholog); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog); dendrite (ortholog); intermediate filament (ortholog) NW_004955424 19474082 19499592 - 102005394 AGCD01024827;GBBH01089723;XM_005385695 XP_005385752 MODEL 8912409 protein-coding Coq2 coenzyme Q2, polyprenyltransferase ENCODES a protein that exhibits 4-hydroxybenzoate polyprenyltransferase activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN glycerol metabolic process (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); brain disease (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955474 6403409 6422135 + 102029736 AGCD01054475;AGCD01054476;AGCD01054477;GBBH01163425;XM_005415401 XP_005415458 MODEL 8936684 protein-coding Exo5 exonuclease 5 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); single-stranded DNA 5'-3' DNA exonuclease activity (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955537 328608 334559 + 102027456 AGCD01070861;AGCD01070862;GBDF01041249;XM_005410561;XM_005410569;XM_005410570;XM_013507800;XM_013507801;XM_013507802;XM_013507803 XP_005410618;XP_005410626;XP_005410627;XP_013363254;XP_013363255;XP_013363256;XP_013363257 MODEL 10323062 ncrna LOC106147464 uncharacterized LOC106147464 NW_004955564 342564 349986 + 106147464 AGCD01074199;AGCD01074200;XR_001232381 MODEL 9066820 pseudo LOC102029815 E3 ubiquitin-protein ligase RNF13 pseudogene NW_004956926 936 2244 - 102029815 AGCD01080321 MODEL 8756554 protein-coding Lrrc70 leucine rich repeat containing 70 INVOLVED IN positive regulation of response to cytokine stimulus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955446 6088863 6090306 - 102024859 AGCD01040087;GBDI01277956;XM_005415354 XP_005415411 MODEL 8907592 ncrna LOC102006644 uncharacterized LOC102006644 NW_004955466 12342203 12365183 - 102006644 AGCD01051124;AGCD01051125;AGCD01051126;GBDK01153059;XR_263319 MODEL 8916617 ncrna LOC102012543 uncharacterized LOC102012543 NW_004955421 4876441 4882855 + 102012543 AGCD01021704;GBCQ01090963;XR_001233851 MODEL 8841411 protein-coding Deptor DEP domain containing MTOR interacting protein ENCODES a protein that exhibits phosphatidic acid binding (ortholog); protein kinase inhibitor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell size (ortholog); negative regulation of TOR signaling (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955417 25538609 25563374 + 102008413 AGCD01018490;AGCD01018491;GBCB01025767;XM_005381914;XM_005381915;XM_013512835 XP_005381971;XP_005381972;XP_013368289 MODEL 8801982 protein-coding LOC102003756 olfactory receptor 52E8-like NW_004955414 21787675 21788613 + 102003756 AGCD01015432;XM_005380430 XP_005380487 MODEL 9013245 protein-coding Ccdc88a coiled-coil and HOOK domain protein 88A ENCODES a protein that exhibits actin binding (ortholog); epidermal growth factor receptor binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN cell migration (ortholog); lamellipodium assembly (ortholog); maintenance of protein location in plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell leading edge (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955424 27617833 27771385 + 102008553 AGCD01025122;AGCD01025123;AGCD01025124;AGCD01025125;AGCD01025126;GBCE01176369;GBDF01048950;XM_005385778;XM_005385779;XM_005385780;XM_013514611;XM_013514612;XM_013514613;XR_001234162 XP_005385835;XP_005385836;XP_005385837;XP_013370065;XP_013370066;XP_013370067 MODEL 8836725 protein-coding Bcan brevican INVOLVED IN cell-matrix adhesion (ortholog); gliogenesis (ortholog); hippocampus development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cell surface (ortholog) NW_004955545 2723780 2739334 + 102006498 AGCD01071921;GBDJ01354414;XM_005411692 XP_005411749 MODEL 8859240 ncrna LOC102010457 uncharacterized LOC102010457 NW_004955462 7333301 7356659 - 102010457 AGCD01049301;AGCD01049302;GBDF01308302;XR_001236602;XR_001236603 MODEL 8759777 protein-coding Dusp15 dual specificity phosphatase 15 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955422 29109901 29119829 + 102013427 AGCD01023379;GBDF01007156;XM_005384884 XP_005384941 MODEL 8848014 protein-coding Calhm1 calcium homeostasis modulator 1 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); identical protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN ATP export (ortholog); ATP transport (ortholog); monoatomic cation transport (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955485 7102059 7105396 + 102005266 AGCD01058635;XM_005403805 XP_005403862 MODEL 9041653 protein-coding Si sucrase-isomaltase ENCODES a protein that exhibits alpha-1,4-glucosidase activity (ortholog); beta-fructofuranosidase activity (ortholog); oligo-1,6-glucosidase activity (ortholog); INVOLVED IN carbohydrate utilization (ortholog); intestinal epithelial cell maturation (ortholog); response to cortisone (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen storage disease type III pathway; glycogen storage disease type IV pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colitis (ortholog); congenital sucrase-isomaltase deficiency (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955448 14686315 14777298 - 102009668 AGCD01041642;AGCD01041643;AGCD01041644;AGCD01041645;GBCQ01066789;XM_005393136 XP_005393193 MODEL 8779513 ncrna LOC102022028 uncharacterized LOC102022028 NW_004955444 6714099 6722009 - 102022028 AGCD01038874;GBBH01224885;XR_262244 MODEL 8834269 protein-coding LOC102003403 formin-like protein 1 NW_004955451 16903163 16906378 - 102003403 AGCD01043711;GBDF01002809;XM_005394500;XM_005394501;XM_013519234 XP_005394557;XP_005394558;XP_013374688 MODEL 39133931 misc_rna 7SK 7SK RNA 9005915 protein-coding Dcp1b decapping mRNA 1B INVOLVED IN cellular response to interleukin-17 (ortholog); protein localization to nucleus (ortholog); protein localization to P-body (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); P-body (ortholog) NW_004955454 4464399 4518613 - 102028378 AGCD01045122;AGCD01045123;GBCE01085759;XM_005395964;XM_013520130;XM_013520131;XM_013520132 XP_005396021;XP_013375584;XP_013375585;XP_013375586 MODEL 8959157 pseudo LOC102005203 tetraspanin-3 pseudogene NW_004955402 42278428 42282472 + 102005203 AGCD01001038 MODEL 9030562 protein-coding Taf5 TATA-box binding protein associated factor 5 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955485 7159199 7176269 - 102014455 AGCD01058638;AGCD01058639;GBDF01127903;XM_013504089 XP_013359543 MODEL 39133251 snrna U4 U4 spliceosomal RNA 8956289 protein-coding Exoc1 exocyst complex component 1 INVOLVED IN embryo implantation (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955447 15049087 15100628 - 102029915 AGCD01041032;GBDJ01190754;XM_005392876;XM_005392877;XM_005392879;XM_005392880;XM_005392881;XM_013518548;XM_013518549;XM_013518550 XP_005392933;XP_005392934;XP_005392936;XP_005392937;XP_005392938;XP_013374002;XP_013374003;XP_013374004 MODEL 8926075 protein-coding LOC102005548 cytochrome P450 2D6-like NW_004957079 5 1733 + 102005548 AGCD01080475;GBDI01036375;XM_013510243 XP_013365697 MODEL 151707875 snorna SNORD52 Small nucleolar RNA SNORD52 8945752 protein-coding Ctso cathepsin O ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); lymphoma (ortholog) NW_004955471 11201934 11225493 + 102013076 AGCD01053249;AGCD01053250;AGCD01053251;GBDK01128336;XM_005400946;XM_005400947;XM_013522905 XP_005401003;XP_005401004;XP_013378359 MODEL 8889748 pseudo LOC102009309 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955514 3732965 3733577 - 102009309 AGCD01067111 MODEL 8740769 protein-coding Arl14epl ARF like GTPase 14 effector protein like ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hereditary Neoplastic Syndromes (ortholog); stomach cancer (ortholog) NW_004955408 35859152 35864159 + 102026296 AGCD01008964;GBBH01041752;XM_005376532 XP_005376589 MODEL 8728678 protein-coding Ran RAN, member RAS oncogene family ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); G protein activity (ortholog); GDP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to mineralocorticoid stimulus (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN CRM1 export pathway; microRNA pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN centriole (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955482 1222944 1223891 - 102029862 AGCD01057206;GBCQ01009220;GBDF01002060;XM_005402988 XP_005403045 MODEL 8851192 protein-coding Exoc2 exocyst complex component 2 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane transport (ortholog); regulation of entry of bacterium into host cell (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta type 1F (ortholog); Breast Cancer, Familial (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary base (ortholog); ciliary shaft (ortholog) NW_004955465 12327423 12457171 + 102029602 AGCD01050546;AGCD01050547;AGCD01050548;GBCB01028772;XM_005398935;XM_013521838 XP_005398992;XP_013377292 MODEL 151707878 snorna SNORD53_SNORD92 Small nucleolar RNA SNORD53/SNORD92 8934962 protein-coding Xirp1 xin actin binding repeat containing 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); cardiac muscle cell development (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hypertrophic cardiomyopathy (ortholog); melanoma (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); fascia adherens (ortholog) NW_004955427 24778157 24787691 + 102024824 AGCD01027521;GBCB01007246;XM_005386558;XM_005386559;XM_005386560;XM_005386561 XP_005386615;XP_005386616;XP_005386617;XP_005386618 MODEL 8712392 protein-coding LOC102025910 olfactory receptor-like protein DTMT NW_004955481 29339 30283 - 102025910 AGCD01056777;XM_005402548 XP_005402605 MODEL 8877149 pseudo LOC102011265 E3 ubiquitin-protein ligase RNF13 pseudogene NW_004955450 12920957 12924698 - 102011265 AGCD01042721 MODEL 39131575 protein-coding TSHZ1 teashirt zinc finger homeobox 1 10272577 ncrna LOC106148555 uncharacterized LOC106148555 NW_004955423 7429808 7439530 + 106148555 AGCD01023601;XR_001234115 MODEL 10178924 ncrna LOC106147465 uncharacterized LOC106147465 NW_004955565 1711711 1723510 + 106147465 AGCD01074329;XR_001232388 MODEL 8919289 protein-coding LOC102025195 vomeronasal type-1 receptor 4-like NW_004955584 426988 427899 - 102025195 AGCD01075941;XM_005414411 XP_005414468 MODEL 8827055 protein-coding LOC102029816 keratin, type I cytoskeletal 19 NW_004955451 15842383 15865690 - 102029816 AGCD01043638;GBDI01009635;XM_005394404;XM_005394406;XM_005394407;XM_005394409;XM_013519185 XP_005394461;XP_005394463;XP_005394464;XP_005394466;XP_013374639 MODEL 8895770 protein-coding Ppm1f protein phosphatase, Mg2+/Mn2+ dependent 1F ENCODES a protein that exhibits calmodulin-dependent protein phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); intracellular signal transduction (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955442 17233258 17256009 + 102016525 AGCD01037946;AGCD01037947;GBCB01067010;XM_013517654 XP_013373108 MODEL 8786155 protein-coding LOC102006262 60S acidic ribosomal protein P1-like NW_004955506 3889447 3890523 - 102006262 AGCD01065321;XM_005407374;XM_005407375 XP_005407431;XP_005407432 MODEL 9009767 pseudo LOC102012546 ribosome biogenesis protein NSA2 homolog pseudogene NW_004955492 272333 273124 + 102012546 AGCD01060632 MODEL 8879454 protein-coding Rgs10 regulator of G protein signaling 10 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled acetylcholine receptor signaling pathway (ortholog); response to amphetamine (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955551 318229 348578 - 102009228 AGCD01072654;GBDI01084285;XM_005412158;XM_013508591 XP_005412215;XP_013364045 MODEL 8898119 protein-coding Efcab14 EF-hand calcium binding domain 14 ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955464 11619010 11653516 + 102012937 AGCD01050160;GBCQ01062683;XM_005398651;XM_005398653;XM_005398654;XM_005398655 XP_005398708;XP_005398710;XP_005398711;XP_005398712 MODEL 8843810 protein-coding LOC102010459 potassium channel subfamily U member 1-like NW_004955463 12698574 12705738 + 102010459 AGCD01049856;AGCD01049857;GBBH01200395;XM_005398408 XP_005398465 MODEL 8709435 protein-coding Pole DNA polymerase epsilon, catalytic subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); anemia (ortholog); FOUND IN epsilon DNA polymerase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955482 373467 418000 + 102019698 AGCD01057171;AGCD01057172;GBDF01088484;XM_005402950;XM_005402952;XM_013503642;XM_013503643 XP_005403007;XP_005403009;XP_013359096;XP_013359097 MODEL 8739441 protein-coding Foxd4 forkhead box D4 NW_004955434 4723198 4725013 - 102010192 AGCD01032168;XM_013516292 XP_013371746 MODEL 39132304 rrna 5S_rRNA 5S ribosomal RNA 8798004 protein-coding Pth2r parathyroid hormone 2 receptor ENCODES a protein that exhibits parathyroid hormone receptor activity (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955457 6584627 6674990 - 102025875 AGCD01046846;AGCD01046847;AGCD01046848;AGCD01046849;AGCD01046850;XM_005397112 XP_005397169 MODEL 8924426 ncrna LOC102003404 uncharacterized LOC102003404 NW_004955404 18428351 18441554 + 102003404 AGCD01003616;GBDF01251601;XR_259317 MODEL 39131689 rrna 5S_rRNA 5S ribosomal RNA 8959313 ncrna LOC102012948 uncharacterized LOC102012948 NW_004955469 10456258 10462046 - 102012948 AGCD01052535;GBCE01121126;XR_001236982;XR_001236983;XR_263447 MODEL 8917084 ncrna LOC102024112 uncharacterized LOC102024112 NW_004955417 16930439 16936030 - 102024112 AGCD01018277;GBDF01075894;XR_260483 MODEL 8992637 pseudo LOC102018702 U2 small nuclear ribonucleoprotein B'' pseudogene NW_004955465 10212506 10213202 - 102018702 AGCD01050503 MODEL 9037512 ncrna LOC102007790 uncharacterized LOC102007790 NW_004955426 20154984 20166755 + 102007790 AGCD01026563;AGCD01026564;GBDF01299083;XR_261208 MODEL 8936107 protein-coding Timm29 translocase of inner mitochondrial membrane 29 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955495 2005929 2007238 + 102028873 AGCD01061744;AGCD01061745;GBCE01024245;GBCE01024246;XM_013505174 XP_013360628 MODEL 8971203 protein-coding Coq3 coenzyme Q3, methyltransferase ENCODES a protein that exhibits 3-demethylubiquinol 3-O-methyltransferase activity (ortholog); 3-demethylubiquinone 3-O-methyltransferase activity (ortholog); O-methyltransferase activity (ortholog); INVOLVED IN glycerol metabolic process (ortholog); methylation (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955411 25243684 25268225 - 102023449 AGCD01012150;AGCD01012151;GBDK01277684;XM_005377802 XP_005377859 MODEL 8841659 protein-coding R3hdm2 R3H domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 4981967 5127409 - 102023559 AGCD01047446;AGCD01047447;AGCD01047448;AGCD01047449;AGCD01047450;AGCD01047451;AGCD01047452;AGCD01047453;AGCD01047454;AGCD01047455;AGCD01047456;GBDK01001499;XM_005397354;XM_005397356;XM_005397358;XM_013520852;XM_013520853;XM_013520854;XM_013520855;XM_013520856;XM_013520857;XM_013520858;XM_013520859;XM_013520860;XM_013520861;XM_013520862 XP_005397411;XP_005397413;XP_005397415;XP_013376306;XP_013376307;XP_013376308;XP_013376309;XP_013376310;XP_013376311;XP_013376312;XP_013376313;XP_013376314;XP_013376315;XP_013376316 MODEL 8938779 protein-coding Elmo3 engulfment and cell motility 3 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog) NW_004955484 9414573 9421255 - 102010808 AGCD01058415;GBDK01048610;XM_005403678;XM_005403679;XM_013503904;XM_013503905 XP_005403735;XP_005403736;XP_013359358;XP_013359359 MODEL 8935810 protein-coding Lrrc71 leucine rich repeat containing 71 ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955545 2977829 2988520 + 102015350 AGCD01071930;GBDI01070693;XM_005411725;XM_005411726;XM_005411729;XM_005411730;XM_005411731;XM_013508285;XM_013508287;XM_013508288;XM_013508289;XM_013508290 XP_005411782;XP_005411783;XP_005411786;XP_005411787;XP_005411788;XP_013363739;XP_013363741;XP_013363742;XP_013363743;XP_013363744 MODEL 8842099 protein-coding LOC102003757 olfactory receptor 11L1-like NW_004955473 3769632 3770567 + 102003757 AGCD01053938;XM_005401224 XP_005401281 MODEL 8931454 protein-coding Bcap29 B cell receptor associated protein 29 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955410 11934158 11988479 + 102006104 AGCD01010838;AGCD01010839;AGCD01010840;GBDF01083953;XM_005377284 XP_005377341 MODEL 8899082 protein-coding Ccdc88b coiled-coil and HOOK domain protein 88B INVOLVED IN defense response to protozoan (ortholog); positive regulation of cytokine production (ortholog); positive regulation of T cell activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955422 20738202 20751016 - 102010272 AGCD01023086;GBBH01228305;XM_013514221;XM_013514222;XM_013514223;XM_013514224 XP_013369675;XP_013369676;XP_013369677;XP_013369678 MODEL 730469186 snorna SNORA51 Small nucleolar RNA SNORA51 9006379 protein-coding Taf5l TATA-box binding protein associated factor 5 like ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); regulation of somatic stem cell population maintenance (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955492 8478147 8515988 + 102014793 AGCD01060812;AGCD01060813;AGCD01060814;AGCD01060815;AGCD01060816;GBBH01057779;XM_005405001;XM_005405002;XM_005405003;XM_013504717;XM_013504718 XP_005405058;XP_005405059;XP_005405060;XP_013360171;XP_013360172 MODEL 39133932 misc_rna 7SK 7SK RNA 8734297 protein-coding Siae sialic acid acetylesterase ENCODES a protein that exhibits sialate O-acetylesterase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); regulation of immune system process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autoimmune disease (ortholog); disease by infectious agent (ortholog); FOUND IN lysosome (ortholog) NW_004955412 25704024 25741646 - 102011521 AGCD01013171;AGCD01013172;AGCD01013173;GBBH01172315;XM_005378431;XM_005378432 XP_005378488;XP_005378489 MODEL 8715665 protein-coding Dcp2 decapping mRNA 2 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); mRNA catabolic process (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog); P-body (ortholog) NW_004955408 32868184 32923788 + 102018473 AGCD01008857;AGCD01008858;GBDF01250860;XM_005376510;XM_013506864 XP_005376567;XP_013362318 MODEL 39134488 misc_rna 7SK 7SK RNA 9064310 protein-coding Ctss cathepsin S ENCODES a protein that exhibits collagen binding (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of peptide antigen (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); late endosome (ortholog) NW_004955413 99279 124793 + 102007752 AGCD01013438;GBDI01062469;XM_005378661;XM_005378662 XP_005378718;XP_005378719 MODEL 151707879 snorna SNORD53_SNORD92 Small nucleolar RNA SNORD53/SNORD92 8848006 protein-coding LOC102005204 PRAME family member 12-like NW_004955608 68987 90514 - 102005204 AGCD01077000;XM_013510117 XP_013365571 MODEL 9027720 protein-coding Xirp2 xin actin binding repeat containing 2 ENCODES a protein that exhibits actin filament binding (ortholog); alpha-actinin binding (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); cell-cell junction organization (ortholog); positive regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Congenital Heart Defects, Multiple Types, 4 (ortholog); depressive disorder (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); focal adhesion (ortholog) NW_004955449 7054636 7131668 - 102008586 AGCD01041972;AGCD01041973;GBCB01003932;XM_013518803 XP_013374257 MODEL 8769880 protein-coding Exoc3 exocyst complex component 3 PARTICIPATES IN E-cadherin signaling pathway; insulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); presynaptic membrane (ortholog) NW_004955504 195743 223812 + 102020356 AGCD01064816;GBDF01047252;XM_005406996;XM_005406997;XM_005406998;XM_013505897 XP_005407053;XP_005407054;XP_005407055;XP_013361351 MODEL 8710803 protein-coding Sack1a scaffolding CK1 anchoring protein A ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell population proliferation (ortholog); epidermal growth factor receptor signaling pathway (ortholog); positive regulation of adipose tissue development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955540 2070396 2095341 + 102028131 AGCD01071312;GBDK01170278;XM_005410920;XM_005410921 XP_005410977;XP_005410978 MODEL 39133252 snrna U4 U4 spliceosomal RNA 8901590 pseudo LOC102025207 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L pseudogene NW_004955454 3332608 3333948 + 102025207 AGCD01045067 MODEL 8921665 protein-coding Dera deoxyribose-phosphate aldolase ENCODES a protein that exhibits deoxyribose-phosphate aldolase activity (ortholog); INVOLVED IN 2'-deoxyribonucleoside catabolic process (ortholog); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955413 12571341 12682985 + 102006998 AGCD01013992;AGCD01013993;AGCD01013994;AGCD01013995;GBDF01053025;XM_005379023;XM_013511619 XP_005379080;XP_013367073 MODEL 9041304 protein-coding R3hdm4 R3H domain containing 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog) NW_004955495 6926619 6936128 + 102018508 AGCD01062103;AGCD01062104;GBDJ01079366;GBDK01218961;XM_013505107 XP_013360561 MODEL 8961531 ncrna LOC102022029 uncharacterized LOC102022029 NW_004955444 13751675 13756534 + 102022029 AGCD01039108;GBCQ01182547;XR_262269 MODEL 9064278 pseudo LOC102006264 nucleophosmin pseudogene NW_004955511 3225794 3227751 + 102006264 AGCD01066450 MODEL 8893523 pseudo LOC102005551 40S ribosomal protein S3a-like NW_004955451 2638931 2646792 + 102005551 AGCD01043017 MODEL 8742257 protein-coding Bcap31 B cell receptor associated protein 31 ENCODES a protein that exhibits MHC class I protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of ERAD pathway (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH deafness, dystonia, and cerebral hypomyelination (ortholog); Developmental Disabilities (ortholog); Failure to Thrive (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955580 429223 459168 - 102015790 AGCD01075606;AGCD01075607;GBBH01032180;XM_005414141 XP_005414198 MODEL 9052032 protein-coding Ccdc88c coiled-coil and HOOK domain protein 88C ENCODES a protein that exhibits frizzled binding (ortholog); G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN apical constriction (ortholog); cilium movement (ortholog); cilium organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN anchoring junction (ortholog); apical junction complex (ortholog); cell junction (ortholog) NW_004955438 13585469 13708170 - 102011590 AGCD01035295;AGCD01035296;AGCD01035297;GBDI01077384;GBDJ01133774;XM_005390438 XP_005390495 MODEL 8814490 protein-coding Efcab2 EF-hand calcium binding domain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955406 8115813 8239352 + 102017303 AGCD01005792;AGCD01005793;AGCD01005794;AGCD01005795;AGCD01005796;AGCD01005797;AGCD01005798;AGCD01005799;AGCD01005800;AGCD01005801;GBBH01131572;GBCE01162934;XM_013520411 XP_013375865 MODEL 8771072 pseudo LOC102009311 mitochondrial fission factor pseudogene NW_004955516 2393052 2393940 - 102009311 AGCD01067455 MODEL 8985824 protein-coding Arl15 ARF like GTPase 15 INVOLVED IN adipose tissue development (ortholog); bone mineralization (ortholog); cell migration (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955446 13239180 13633141 + 102024174 AGCD01040248;AGCD01040249;AGCD01040250;AGCD01040251;AGCD01040252;AGCD01040253;AGCD01040254;AGCD01040255;GBCB01018445;XM_005392717;XM_005392718 XP_005392774;XP_005392775 MODEL 8813165 protein-coding Ranbp1 RAN binding protein 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); INVOLVED IN cellular response to leptomycin B (ortholog); cellular response to xenobiotic stimulus (ortholog); positive regulation of mitotic centrosome separation (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon cytoplasm (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955442 17985456 17992945 - 102024288 AGCD01037991;GBDF01008685;XM_005391735;XM_005391736 XP_005391792;XP_005391793 MODEL 9022701 protein-coding LOC102006651 sulfotransferase 1C2 NW_004955470 11975224 11987943 + 102006651 AGCD01052916;AGCD01052917;GBCQ01000070;XM_005400797;XM_005400798;XM_005400799 XP_005400854;XP_005400855;XP_005400856 MODEL 8851126 pseudo LOC102025911 60S ribosomal protein L23a pseudogene NW_004955482 3503687 3504161 - 102025911 AGCD01057266 MODEL 8982554 protein-coding LOC102018708 free fatty acid receptor 2 NW_004955468 4681077 4683818 + 102018708 AGCD01051919;XM_005400052;XM_013522278;XM_013522279 XP_005400109;XP_013377732;XP_013377733 MODEL 8780694 protein-coding Chpf2 chondroitin polymerizing factor 2 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955491 5649079 5653158 + 102006586 AGCD01060494;GBDF01155655;XM_005404824 XP_005404881 MODEL 8982307 protein-coding LOC102007793 solute carrier family 22 member 13 NW_004955427 25740144 25743458 + 102007793 AGCD01027551;GBDF01180895;XM_013515058 XP_013370512 MODEL 8822598 pseudo LOC102011274 translocation protein SEC62 pseudogene NW_004955453 11024593 11120561 + 102011274 AGCD01044797;AGCD01044798;AGCD01044799;AGCD01044800 MODEL 8931552 protein-coding Ctsv cathepsin V ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); sarcoma (ortholog) NW_004955422 23722899 23728426 + 102012448 AGCD01023204;AGCD01023205;GBDI01064068;XM_005384704 XP_005384761 MODEL 8944390 ncrna LOC102029818 uncharacterized LOC102029818 NW_004955404 16555291 16568371 + 102029818 AGCD01003564;GBDJ01223861;XR_001234764;XR_001234770;XR_259315 MODEL 8912484 protein-coding Ppm1g protein phosphatase, Mg2+/Mn2+ dependent 1G ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955469 9344968 9350123 - 102004592 AGCD01052498;GBDJ01076537;GBDJ01076538;XM_005400501 XP_005400558 MODEL 8717722 protein-coding Calhm2 calcium homeostasis modulator family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN ATP export (ortholog); calcium ion import (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); dementia (ortholog); depressive disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955485 7106926 7111745 + 102004935 AGCD01058635;GBBH01186775;XM_005403804 XP_005403861 MODEL 8818740 protein-coding Insyn2b inhibitory synaptic factor family member 2B NW_004955408 22842645 22864156 - 102014421 AGCD01008581;GBDF01044092;XM_005376309;XR_001232379 XP_005376366 MODEL 8756228 ncrna LOC102012550 uncharacterized LOC102012550 NW_004955422 29069963 29074568 + 102012550 AGCD01023378;GBDJ01405387;XR_260929 MODEL 9042344 protein-coding Rgs11 regulator of G protein signaling 11 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); dendrite terminus (ortholog) NW_004955442 16905982 16914772 + 102004206 AGCD01037922;AGCD01037923;GBDF01207822;XM_005391662;XM_005391663;XM_005391664;XM_005391665;XM_005391666 XP_005391719;XP_005391720;XP_005391721;XP_005391722;XP_005391723 MODEL 730469101 snorna SNORA51 Small nucleolar RNA SNORA51 39132307 rrna 5S_rRNA 5S ribosomal RNA 8783306 ncrna LOC102003405 uncharacterized LOC102003405 NW_004955452 4390516 4398593 - 102003405 AGCD01043981;GBDK01434065;XR_262649 MODEL 39131690 rrna 5S_rRNA 5S ribosomal RNA 8788001 protein-coding Pthlh parathyroid hormone like hormone ENCODES a protein that exhibits hormone activity (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); endochondral ossification (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH achondroplasia (ortholog); acute necrotizing pancreatitis (ortholog); alcoholic pancreatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955505 6834533 6846909 + 102018623 AGCD01065187;GBBH01206343;GBDK01026033;XM_005407152 XP_005407209 MODEL 9012137 ncrna LOC102024113 uncharacterized LOC102024113 NW_004955418 18836977 18846965 - 102024113 AGCD01019183;GBDF01179969;XR_260571 MODEL 9028218 protein-coding LOC102012951 olfactory receptor 52N2 NW_004955414 21777014 21940262 - 102012951 AGCD01015432;AGCD01015433;AGCD01015434;AGCD01015435;AGCD01015436;AGCD01015437;AGCD01015438;GBDF01075977;XM_005380109;XM_005380110;XM_005380111;XM_005380112;XM_013511697 XP_005380166;XP_005380167;XP_005380168;XP_005380169;XP_013367151 MODEL 39134489 misc_rna 7SK 7SK RNA 8987757 protein-coding Timm44 translocase of inner mitochondrial membrane 44 ENCODES a protein that exhibits enzyme binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); intracellular protein transport (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955563 1328374 1342011 + 102018138 AGCD01074140;AGCD01074141;GBDJ01080690;XM_005413138 XP_005413195 MODEL 8874397 pseudo LOC102006654 40S ribosomal protein SA-like NW_004955414 3111109 3159323 + 102006654 AGCD01014815;AGCD01014816 MODEL 8886566 protein-coding Dusp16 dual specificity phosphatase 16 ENCODES a protein that exhibits JUN kinase binding (ortholog); mitogen-activated protein kinase binding (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN negative regulation of MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 9404259 9481061 - 102016904 AGCD01013903;AGCD01013904;AGCD01013905;AGCD01013906;GBDF01088602;XM_013511422;XM_013511423;XM_013511424;XM_013511425 XP_013366876;XP_013366877;XP_013366878;XP_013366879 MODEL 8864507 protein-coding Elmod1 ELMO domain containing 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cilium assembly (ortholog); intracellular protein localization (ortholog); protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cilium (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955412 9975110 10013932 + 102028513 AGCD01012753;AGCD01012754;GBCE01023906;GBDI01135314;XM_013511123 XP_013366577 MODEL 9027635 ncrna LOC102005205 uncharacterized LOC102005205 NW_004955403 8964592 8970691 - 102005205 AGCD01001898;GBDF01159891;XR_001234497 MODEL 730469457 misc_rna Xist_exon1 X-chromosome inactivation exon 1 8889235 protein-coding Lrrc72 leucine rich repeat containing 72 ASSOCIATED WITH colon adenocarcinoma (ortholog) NW_004955410 19714223 19774630 + 102022368 AGCD01011030;GBDF01004934;XM_005377335 XP_005377392 MODEL 8841217 pseudo LOC102010460 40S ribosomal protein S14 pseudogene NW_004955463 13024771 13025227 - 102010460 AGCD01049860 MODEL 10173859 protein-coding Foxe1 forkhead box E1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cell migration (ortholog); cellular response to insulin stimulus (ortholog); chordate pharynx development (ortholog); ASSOCIATED WITH Bamforth-Lazarus syndrome (ortholog); congenital hypothyroidism (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) NW_004955419 27616606 27619908 - 106148302 AGCD01020443;AGCD01020444;GBDI01006499;XM_013513218 XP_013368672 MODEL 8734029 protein-coding Taf6 TATA-box binding protein associated factor 6 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alazami-Yuan Syndrome (ortholog); Breast Cancer, Familial (ortholog); Cornelia de Lange syndrome 1 (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955573 752646 759292 + 102003074 AGCD01075004;GBDF01052297;XM_005413754;XM_005413755 XP_005413811;XP_005413812 MODEL 8795883 ncrna LOC102022031 uncharacterized LOC102022031 NW_004955447 11648372 11723145 - 102022031 AGCD01040911;AGCD01040912;AGCD01040913;AGCD01040914;AGCD01040915;GBDF01052321;XR_001235704;XR_262421 MODEL 8896336 pseudo LOC102006265 serine/arginine-rich splicing factor 12 pseudogene NW_004955430 10505467 10561459 + 102006265 AGCD01029436;AGCD01029437;AGCD01029438 MODEL 39133933 misc_rna 7SK 7SK RNA 9021302 pseudo LOC102012551 leucine-rich repeat-containing protein 58 pseudogene NW_004955494 8245217 8247491 + 102012551 AGCD01061581 MODEL 8774439 protein-coding Siah1 siah E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); male meiosis I (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH BURATTI-HAREL SYNDROME (ortholog); genetic disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955474 6970383 6982231 + 102006904 AGCD01054511;GBCB01039065;GBDF01043021;XM_005401400 XP_005401457 MODEL 8826392 protein-coding Dcph1 damage control phosphatase 1 ENCODES a protein that exhibits enzyme binding (ortholog); fructose 6-phosphate aldolase activity (ortholog); fructose-1-phosphatase activity (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog) NW_004955439 10136393 10151178 - 102003178 AGCD01035857;AGCD01035858;GBCQ01032562;XM_005390582 XP_005390639 MODEL 9002445 protein-coding Tshz1 teashirt zinc finger homeobox 1 INVOLVED IN anterior/posterior pattern specification (ortholog); middle ear morphogenesis (ortholog); soft palate development (ortholog); ASSOCIATED WITH Congenital Aural Atresia (ortholog); Familial Prostate Cancer (ortholog); intellectual disability (ortholog) NW_004955402 58695150 58717926 + 102015164 AGCD01001539;GBDK01397330;XM_013511962 XP_013367416 MODEL 8702700 protein-coding Coq4 coenzyme Q4 ENCODES a protein that exhibits 4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase activity (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955570 837216 846653 + 102024062 AGCD01074769;GBDJ01131032;XM_005413536 XP_005413593 MODEL 8779702 ncrna LOC102025914 uncharacterized LOC102025914 NW_004955490 514897 522805 - 102025914 AGCD01060066;AGCD01060067;GBDJ01095169;XR_001231208;XR_264027 MODEL 153211032 snorna SNORD53_SNORD92 Small nucleolar RNA SNORD53/SNORD92 9000332 ncrna LOC102018711 uncharacterized LOC102018711 NW_004955469 11293500 11308124 + 102018711 AGCD01052559;AGCD01052560;GBDF01306362;XR_263452 MODEL 8712693 protein-coding Exoc3l1 exocyst complex component 3 like 1 INVOLVED IN exocytosis (ortholog); peptide hormone secretion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN exocyst (ortholog); secretory granule (ortholog) NW_004955484 9429578 9434982 + 102013087 AGCD01058415;GBDJ01264398;XM_005403687;XM_013503982;XM_013503983;XM_013503984 XP_005403744;XP_013359436;XP_013359437;XP_013359438 MODEL 8944367 protein-coding Pole2 DNA polymerase epsilon 2, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN epsilon DNA polymerase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955409 12983488 13014669 + 102029717 AGCD01009585;AGCD01009586;GBBH01205801;GBDF01081361;XM_013510466 XP_013365920 MODEL 8826063 protein-coding R3hdml R3H domain containing like ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955445 12991667 13004174 - 102018663 AGCD01039766;GBCQ01049962;XM_005392473 XP_005392530 MODEL 8976447 protein-coding Ctsw cathepsin W ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955422 19439997 19443451 - 102024811 AGCD01023006;GBDJ01229701;XM_005384446;XM_005384447 XP_005384503;XP_005384504 MODEL 39133257 snrna U4 U4 spliceosomal RNA 8800159 protein-coding Derl1 derlin 1 ENCODES a protein that exhibits ATPase binding (ortholog); identical protein binding (ortholog); MHC class I protein binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); cellular response to unfolded protein (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN ATPase complex (ortholog); Derlin-1 retrotranslocation complex (ortholog); Derlin-1-VIMP complex (ortholog) NW_004955540 1918230 1944186 - 102025511 AGCD01071308;GBCE01054838;XM_005410910 XP_005410967 MODEL 9000818 pseudo LOC102009312 60S ribosomal protein L17 pseudogene NW_004955434 13427369 13427899 + 102009312 AGCD01032402 MODEL 8843298 protein-coding Ccdc89 coiled-coil domain containing 89 NW_004955414 7197533 7200234 + 102017973 AGCD01014950;GBDF01124462;XM_005379768 XP_005379825 MODEL 8762091 protein-coding Efcab3 EF-hand calcium binding domain 3 ASSOCIATED WITH hepatocellular carcinoma (ortholog); uveal melanoma (ortholog) NW_004955478 9284421 9778849 - 102009052 AGCD01056061;AGCD01056062;AGCD01056063;AGCD01056064;AGCD01056065;AGCD01056066;AGCD01056067;AGCD01056068;AGCD01056069;AGCD01056070;AGCD01056071;AGCD01056072;AGCD01056073;AGCD01056074;AGCD01056075;AGCD01056076;AGCD01056077;AGCD01056078;AGCD01056079;AGCD01056080;AGCD01056081;AGCD01056082;AGCD01056083;AGCD01056084;AGCD01056085;AGCD01056086;AGCD01056087;AGCD01056088;AGCD01056089;AGCD01056090;AGCD01056091;AGCD01056092;AGCD01056093;AGCD01056094;AGCD01056095;AGCD01056096;AGCD01056097;GBDK01169061;XM_005402243;XM_005402244;XM_005402245;XM_005402246;XM_005402247 XP_005402300;XP_005402301;XP_005402302;XP_005402303;XP_005402304 MODEL 9023923 protein-coding Arl16 ARF like GTPase 16 ASSOCIATED WITH Childhood Schizophrenia (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); photoreceptor inner segment (ortholog) NW_004955506 1418132 1420937 + 102028993 AGCD01065262;AGCD01065263;GBDF01155516;XM_005407263 XP_005407320 MODEL 8717872 protein-coding LOC102012953 olfactory receptor 491-like NW_004955414 23663348 23664286 - 102012953 AGCD01015514;XM_013511761 XP_013367215 MODEL 8730603 ncrna LOC102003758 uncharacterized LOC102003758 NW_004955415 5445231 5497596 + 102003758 AGCD01015995;GBDK01101825;XR_260270 MODEL 10073890 ncrna LOC106147466 uncharacterized LOC106147466 NW_004955565 1741780 1752046 + 106147466 AGCD01074329;XR_001232389 MODEL 9006014 protein-coding Chpt1 choline phosphotransferase 1 ENCODES a protein that exhibits diacylglycerol cholinephosphotransferase activity (ortholog); phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN phosphatidylcholine biosynthetic process (ortholog); platelet activating factor biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955405 37081024 37093798 + 102002990 AGCD01005437;AGCD01005438;GBBH01142824;GBDK01239060;XM_013518716 XP_013374170 MODEL 8879264 ncrna LOC102029828 uncharacterized LOC102029828 NW_004955408 8570067 8578401 - 102029828 AGCD01008220;GBDJ01262905;XR_001232284;XR_001232285;XR_001232286 MODEL 408395152 protein-coding SLC1A5 8793600 protein-coding LOC102025212 zinc finger protein 709-like NW_004955408 2924 43257 + 102025212 AGCD01007905;AGCD01007906;AGCD01007907;GBDF01011173;XM_005375996;XM_013507810 XP_005376053;XP_013363264 MODEL 8729440 protein-coding Ppm1h protein phosphatase, Mg2+/Mn2+ dependent 1H ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein phosphatase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955458 9742629 9899167 - 102007198 AGCD01047661;AGCD01047662;AGCD01047663;AGCD01047664;AGCD01047665;GBBH01091029;XM_013520940 XP_013376394 MODEL 8932390 protein-coding Elmod2 ELMO domain containing 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of defense response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); long QT syndrome (ortholog) NW_004955428 3289593 3308927 - 102013315 AGCD01027652;GBCQ01127045;XM_005386672;XM_005386673 XP_005386729;XP_005386730 MODEL 8768577 protein-coding LOC102018712 olfactory receptor 51F2 NW_004955414 20398735 20399715 + 102018712 AGCD01015371;XM_005380056 XP_005380113 MODEL 8983621 protein-coding Calhm3 calcium homeostasis modulator 3 ENCODES a protein that exhibits voltage-gated channel activity (ortholog); voltage-gated monoatomic ion channel activity (ortholog); INVOLVED IN ATP export (ortholog); ATP transport (ortholog); protein heterooligomerization (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955485 7089268 7092968 + 102003970 AGCD01058634;GBBH01110679;XM_005403802;XM_005403803 XP_005403859;XP_005403860 MODEL 8797004 protein-coding Ints1 integrator complex subunit 1 INVOLVED IN blastocyst growth (ortholog); embryo implantation (ortholog); inner cell mass cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); brachydactyly (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nucleus (ortholog) NW_004955460 9116650 9149470 - 102020093 AGCD01048539;AGCD01048540;GBDI01084167;XM_013521197;XM_013521198;XM_013521199;XM_013521200;XM_013521201 XP_013376651;XP_013376652;XP_013376653;XP_013376654;XP_013376655 MODEL 730468926 snorna SNORA51 Small nucleolar RNA SNORA51 8870173 protein-coding Bcar1 BCAR1 scaffold protein, Cas family member ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); antigen receptor-mediated signaling pathway (ortholog); PARTICIPATES IN endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin-like growth factor signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast ductal carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955484 2223306 2258444 + 102022602 AGCD01058094;AGCD01058095;AGCD01058096;GBDF01288380;XM_005403450;XM_013503857;XM_013503858 XP_005403507;XP_013359311;XP_013359312 MODEL 8894346 protein-coding Ctsz cathepsin Z ENCODES a protein that exhibits carboxypeptidase activity (ortholog); cysteine-type carboxypeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN epithelial tube branching involved in lung morphogenesis (ortholog); negative regulation of plasminogen activation (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955445 586901 597753 + 102019446 AGCD01039320;GBDJ01304284;XM_005392214;XM_013518268 XP_005392271;XP_013373722 MODEL 8727798 protein-coding Taf6l TATA-box binding protein associated factor 6 like ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); regulation of somatic stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955599 453275 461571 - 102020863 AGCD01076649;AGCD01076650;GBCB01057066;GBDF01163264;XM_013510041 XP_013365495 MODEL 39132312 rrna 5S_rRNA 5S ribosomal RNA 8847908 ncrna LOC102006268 uncharacterized LOC102006268 NW_004955432 9553990 9572917 + 102006268 AGCD01030908;AGCD01030909;GBDF01017350;XR_261521 MODEL 8768711 ncrna LOC102024114 uncharacterized LOC102024114 NW_004955483 8673978 8681030 - 102024114 AGCD01057842;GBDF01306700;XR_001231015;XR_001231016;XR_263875 MODEL 8808899 protein-coding Sack1b scaffolding CK1 anchoring protein B ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); epidermal growth factor receptor binding (ortholog); phosphatidylinositol 3-kinase catalytic subunit binding (ortholog); INVOLVED IN cell population proliferation (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955411 1248945 1306848 - 102005014 AGCD01011475;AGCD01011476;GBDJ01264594;XM_005377589;XM_013510904 XP_005377646;XP_013366358 MODEL 8956076 protein-coding Ranbp10 RAN binding protein 10 ENCODES a protein that exhibits beta-tubulin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); nucleus (ortholog) NW_004955484 8889349 8960122 + 102023702 AGCD01058400;AGCD01058401;GBDF01123418;XM_005403623 XP_005403680 MODEL 8840649 ncrna LOC102007794 uncharacterized LOC102007794 NW_004955506 4248624 4261163 - 102007794 AGCD01065330;GBDI01281509;XR_264348 MODEL 39134490 misc_rna 7SK 7SK RNA 8989063 protein-coding Dcps decapping enzyme, scavenger ENCODES a protein that exhibits 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity (ortholog); identical protein binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); mRNA methylguanosine-cap decapping (ortholog); ASSOCIATED WITH Al-Raqad Syndrome (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); m7G(5')pppN diphosphatase complex (ortholog) NW_004955412 27326946 27367455 + 102006559 AGCD01013234;AGCD01013235;AGCD01013236;GBDF01121111;XM_005378510 XP_005378567 MODEL 8714840 protein-coding Timm50 translocase of inner mitochondrial membrane 50 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity (ortholog); interleukin-2 receptor binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN mitochondrial membrane organization (ortholog); protein import into mitochondrial matrix (ortholog); release of cytochrome c from mitochondria (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH 3-methylglutaconic aciduria type 9 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); mitochondrial inner membrane (ortholog) NW_004955468 85681 94300 - 102020644 AGCD01051681;GBDF01010510;XM_005399767 XP_005399824 MODEL 8996837 protein-coding LOC102025919 taste receptor type 2 member 39-like NW_004955494 454992 455991 - 102025919 AGCD01061378;XM_013504915 XP_013360369 MODEL 730469233 misc_rna Xist_exon4 X-chromosome inactivation exon 4 8744562 protein-coding Dusp18 dual specificity phosphatase 18 ENCODES a protein that exhibits phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of bone resorption (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); nucleoplasm (ortholog) NW_004955455 4899090 4906785 - 102027487 AGCD01045704;AGCD01045705;GBBH01110550;XM_005396282;XM_005396283;XM_013520328 XP_005396339;XP_005396340;XP_013375782 MODEL 8789734 pseudo LOC102005556 ATP-binding cassette sub-family F member 2 pseudogene NW_004955406 13707389 13709243 + 102005556 AGCD01005949 MODEL 8915404 protein-coding Lrrc73 leucine rich repeat containing 73 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); uveal melanoma (ortholog) NW_004955437 9337538 9340360 - 102010522 AGCD01034526;GBCQ01031442;XM_005389777 XP_005389834 MODEL 8770314 pseudo LOC102010465 acyl carrier protein, mitochondrial pseudogene NW_004955467 7728117 7728770 - 102010465 AGCD01051438;XM_005399383 MODEL 10158849 ncrna LOC106148556 uncharacterized LOC106148556 NW_004955423 17988129 17996948 - 106148556 AGCD01023866;GBDI01238295;XR_001234116 MODEL 8878980 protein-coding LOC102022034 chromosome unknown open reading frame, human C1orf56 INVOLVED IN regulation of cell population proliferation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955588 417837 421880 + 102022034 AGCD01076109;GBDF01009026;XM_005414483 XP_005414540 MODEL 8963976 protein-coding Rgs12 regulator of G protein signaling 12 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); GTPase regulator activity (ortholog); INVOLVED IN negative regulation of G protein-coupled receptor signaling pathway (ortholog); termination of G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; G protein mediated signaling pathway via Galpha12/Galpha13 family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN apical dendrite (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955514 2081575 2154414 + 102006701 AGCD01067072;AGCD01067073;AGCD01067074;GBBH01064970;GBDF01306453;XM_013506795 XP_013362249 MODEL 9019281 protein-coding Elmod3 ELMO domain containing 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN auditory receptor cell development (ortholog); cilium assembly (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant nonsyndromic deafness 81 (ortholog); autosomal recessive nonsyndromic deafness 88 (ortholog); FOUND IN cilium (ortholog); Golgi apparatus (ortholog) NW_004955424 2082480 2107599 - 102005273 AGCD01024262;GBBH01150506;XM_005385437;XM_005385438;XM_013514628 XP_005385494;XP_005385495;XP_013370082 MODEL 8783574 protein-coding Derl2 derlin 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signal recognition particle binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955467 10824922 10837408 - 102012520 AGCD01051585;AGCD01051586;GBCC01027755;GBDI01134494;XM_013522214 XP_013377668 MODEL 9032813 protein-coding LOC102003410 DNA fragmentation factor subunit alpha-like NW_004955454 12312169 12320100 + 102003410 AGCD01045408;GBDF01264302;XM_005396061 XP_005396118 MODEL 8734614 protein-coding Ptk2 protein tyrosine kinase 2 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); cell migration (ortholog); PARTICIPATES IN integrin mediated signaling pathway; long term potentiation; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); ciliary basal body (ortholog) NW_004955461 14337914 14622779 - 102025551 AGCD01049055;AGCD01049056;GBBH01185452;GBCB01040518;XM_005398062;XM_005398063;XM_013521315;XM_013521316;XM_013521317;XM_013521318;XM_013521319;XM_013521320;XM_013521321;XM_013521322;XM_013521323 XP_005398119;XP_005398120;XP_013376769;XP_013376770;XP_013376771;XP_013376772;XP_013376773;XP_013376774;XP_013376775;XP_013376776;XP_013376777 MODEL 8839928 pseudo LOC102011280 probable methyltransferase-like protein 15 NW_004955457 7384810 7385987 - 102011280 AGCD01046877 MODEL 8724084 protein-coding Siah2 siah E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN estrogen signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH lens disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955448 1907478 1926445 - 102018449 AGCD01041271;GBDJ01180931;GBDK01196937;XM_013518651 XP_013374105 MODEL 8821811 protein-coding Efcab5 EF-hand calcium binding domain 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); cholangiocarcinoma (ortholog) NW_004955481 3207789 3381228 - 102009176 AGCD01056895;AGCD01056896;AGCD01056897;AGCD01056898;AGCD01056899;AGCD01056900;AGCD01056901;AGCD01056902;AGCD01056903;GBDF01088005;XM_013503350;XM_013503351;XM_013503352;XM_013503353;XM_013503354;XM_013503355 XP_013358804;XP_013358805;XP_013358806;XP_013358807;XP_013358808;XP_013358809 MODEL 8765206 protein-coding LOC102022035 glyoxalase domain-containing protein 4 NW_004955892 4493 13806 - 102022035 AGCD01078595;GBCB01023686;GBCE01074554;XM_005415140 XP_005415197 MODEL 8824239 protein-coding Tshz2 teashirt zinc finger homeobox 2 INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog) NW_004955445 5571587 5830728 - 102016322 AGCD01039472;AGCD01039473;AGCD01039474;AGCD01039475;GBDF01222748;XM_005392287 XP_005392344 MODEL 8714554 protein-coding Coq5 coenzyme Q5, methyltransferase ENCODES a protein that exhibits 2-methoxy-6-polyprenyl-1,4-benzoquinol methyltransferase activity (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog); melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955455 11124009 11142665 + 102008820 AGCD01045984;GBDF01251415;XM_005396500;XM_005396501 XP_005396557;XP_005396558 MODEL 8860198 pseudo LOC102012954 SAP domain-containing ribonucleoprotein pseudogene NW_004955472 1335239 1335980 - 102012954 AGCD01053386 MODEL 8701357 protein-coding Chrac1 chromatin accessibility complex subunit 1 INVOLVED IN chromatin remodeling (ortholog); nucleosome assembly (ortholog); regulation of DNA replication (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN pericentric heterochromatin (ortholog) NW_004955461 14184318 14189645 + 102023235 AGCD01049048;GBBH01119368;XM_005398053;XM_013521311 XP_005398110;XP_013376765 MODEL 8705067 protein-coding Rab10 RAB10, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GDP-dissociation inhibitor binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); axonogenesis (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); CIC-rearranged sarcoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cilium (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) NW_004955469 8057235 8138983 + 102009369 AGCD01052446;AGCD01052447;AGCD01052448;AGCD01052449;AGCD01052450;AGCD01052451;AGCD01052452;GBDF01090181;XM_005400418 XP_005400475 MODEL 39131691 rrna 5S_rRNA 5S ribosomal RNA 9065323 protein-coding Foxf1 forkhead box F1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood vessel development (ortholog); cardiac left ventricle morphogenesis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH atrioventricular septal defect (ortholog); bladder neck obstruction (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955541 1341715 1345397 + 102022634 AGCD01071376;GBDI01293572;GBDK01009651;XM_005410989;XR_264836 XP_005411046 MODEL 39133934 misc_rna 7SK 7SK RNA 8744266 ncrna LOC102012556 uncharacterized LOC102012556 NW_004955500 5638086 5640274 - 102012556 AGCD01063847;GBDF01250373;XR_264229 MODEL 8711088 protein-coding LOC102009319 HLA class II histocompatibility antigen, DRB1-1 beta chain-like NW_004955437 1228243 1262090 - 102009319 AGCD01034197;AGCD01034198;GBDK01061271;XM_013517040;XM_013517041 XP_013372494;XP_013372495 MODEL 8751711 protein-coding Taf7 TATA-box binding protein associated factor 7 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); histone H3K27me3 reader activity (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); estrogen receptor signaling pathway (ortholog); mRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytoplasm (ortholog); MLL1 complex (ortholog); nucleus (ortholog) NW_004955415 12453655 12456070 + 102009938 AGCD01016196;GBBH01033487;XM_005380736 XP_005380793 MODEL 39132316 rrna 5S_rRNA 5S ribosomal RNA 8872317 protein-coding Cttn cortactin ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); cadherin binding involved in cell-cell adhesion (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axon extension (ortholog); cell motility (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH acute chest syndrome (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin filament (ortholog); anchoring junction (ortholog); apical plasma membrane (ortholog) NW_004955422 15838036 15874067 - 102019074 AGCD01022882;AGCD01022883;GBCQ01005954;XM_005384232;XM_005384233;XM_013514240 XP_005384289;XP_005384290;XP_013369694 MODEL 8878216 protein-coding Arl2 ARF like GTPase 2 ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN acetylcholine transport (ortholog); centrosome cycle (ortholog); maintenance of protein location in nucleus (ortholog); ASSOCIATED WITH melanoma (ortholog); Microcornea, Rod-Cone Dystrophy, Cataract, and Posterior Staphyloma 1 (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955422 20166956 20172954 - 102020576 AGCD01023068;GBDI01002739;XM_005384528;XM_005384529 XP_005384585;XP_005384586 MODEL 8951641 protein-coding Pole3 DNA polymerase epsilon 3, accessory subunit INVOLVED IN chromatin remodeling (ortholog); DNA-templated DNA replication (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN ATAC complex (ortholog); epsilon DNA polymerase complex (ortholog); pericentric heterochromatin (ortholog) NW_004955419 14086940 14089906 + 102019174 AGCD01020011;AGCD01020012;GBBH01117842;GBDF01085263;XM_005382662 XP_005382719 MODEL 8856656 ncrna LOC102003760 uncharacterized LOC102003760 NW_004955475 4403226 4412590 - 102003760 AGCD01054876;AGCD01054877;GBDK01406757;XR_001230760;XR_001230761;XR_263610 MODEL 8869807 protein-coding Ranbp17 RAN binding protein 17 ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955408 23777501 24092993 + 102019032 AGCD01008590;AGCD01008591;AGCD01008592;AGCD01008593;AGCD01008594;GBDF01045449;XM_005376323;XM_005376324;XM_005376325;XM_005376326 XP_005376380;XP_005376381;XP_005376382;XP_005376383 MODEL 8995288 ncrna LOC102025217 uncharacterized LOC102025217 NW_004955409 3253468 3265102 - 102025217 AGCD01009237;GBDF01078183;XR_259747 MODEL 10120733 ncrna LOC106147467 uncharacterized LOC106147467 NW_004955565 1364399 1366888 + 106147467 AGCD01074315;GBDI01212007;XR_001232390 MODEL 8841928 protein-coding Slc1a5 solute carrier family 1 member 5 ENCODES a protein that exhibits antiporter activity (ortholog); L-aspartate transmembrane transporter activity (ortholog); L-glutamine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); L-aspartate import across plasma membrane (ortholog); L-glutamine import across plasma membrane (ortholog); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN basal plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955574 798004 806631 - 102030015 AGCD01075130;GBDF01209889;XM_013509576 XP_013365030 MODEL 39133163 snrna U4 U4 spliceosomal RNA 9065069 protein-coding Ppm1j protein phosphatase, Mg2+/Mn2+ dependent 1J ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); Mesothelioma (ortholog) NW_004955435 16124087 16129296 - 102006493 AGCD01033295;GBDF01004408;XM_005388968 XP_005389025 MODEL 8846032 protein-coding Timm8a translocase of inner mitochondrial membrane 8A ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); protein localization to mitochondrion (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Animal Disease Models (ortholog); Auditory Neuropathy (ortholog); deafness-dystonia-optic neuronopathy syndrome (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog); mitochondrion (ortholog) NW_004955503 7480075 7483218 - 102025707 AGCD01064794;GBCE01065783;XM_005406950 XP_005407007 MODEL 9061414 protein-coding Exoc3l2 exocyst complex component 3 like 2 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH BRAIN MALFORMATION RENAL SYNDROME (ortholog); Breast Cancer, Familial (ortholog); clubfoot (ortholog) NW_004955555 2260885 2281784 - 102007818 AGCD01073142;AGCD01073143;GBCE01100000;GBCQ01063072;XM_005412504 XP_005412561 MODEL 8993613 protein-coding LOC102018714 serine/threonine-protein kinase 33-like NW_004955414 24256281 24303682 - 102018714 AGCD01015539;AGCD01015540;AGCD01015541;GBDI01261988;XM_013511741 XP_013367195 MODEL 9059933 protein-coding Tshz3 teashirt zinc finger homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); kidney morphogenesis (ortholog); kidney smooth muscle cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); congenital anomalies of the kidney and urinary tract (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN growth cone (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955468 6448167 6669706 + 102006647 AGCD01051985;AGCD01051986;AGCD01051987;AGCD01051988;GBDJ01311365;XM_005400095;XR_263394 XP_005400152 MODEL 730468999 snorna SNORA51 Small nucleolar RNA SNORA51 8826960 protein-coding Calhm4 calcium homeostasis modulator family member 4 ASSOCIATED WITH epilepsy (ortholog) NW_004955526 126100 137551 - 102026906 AGCD01069212;GBDF01261152;XM_005409746;XM_005409747 XP_005409803;XP_005409804 MODEL 8960874 protein-coding Ints10 integrator complex subunit 10 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nucleus (ortholog) NW_004955403 43519239 43546209 + 102022036 AGCD01002773;GBDF01049941;XM_005373620;XM_005373621;XM_005373622;XM_005373623;XM_013513619;XM_013513628 XP_005373677;XP_005373678;XP_005373679;XP_005373680;XP_013369073;XP_013369082 MODEL 9058487 protein-coding Ccdc9 coiled-coil domain containing 9 ENCODES a protein that exhibits RNA binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN exon-exon junction complex (ortholog) NW_004955574 1190611 1203274 + 102007063 AGCD01075164;GBDI01121830;GBDJ01084028;XM_013509529;XM_013509530;XM_013509531;XM_013509532;XM_013509533;XM_013509534;XM_013509535 XP_013364983;XP_013364984;XP_013364985;XP_013364986;XP_013364987;XP_013364988;XP_013364989 MODEL 9033046 protein-coding LOC102010472 olfactory receptor 688 NW_004955414 21882234 21901979 + 102010472 AGCD01015436;XM_005380504 XP_005380561 MODEL 8872756 protein-coding LOC102005206 PRAME family member 20-like NW_004955615 197175 199688 + 102005206 AGCD01077251;XM_005414983 XP_005415040 MODEL 8892077 ncrna LOC102006656 uncharacterized LOC102006656 NW_004955415 5972499 5982441 - 102006656 AGCD01016005;GBDJ01024058;XR_260272 MODEL 8890822 protein-coding Eln elastin ENCODES a protein that exhibits extracellular matrix binding (ortholog); extracellular matrix constituent conferring elasticity (ortholog); INVOLVED IN aorta development (ortholog); aortic valve morphogenesis (ortholog); blood vessel remodeling (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Anetoderma (ortholog); anxiety disorder (ortholog); FOUND IN elastic fiber (ortholog); extracellular region (ortholog) NW_004955456 13788992 13818836 - 102020983 AGCD01046622;AGCD01046623;GBDF01022221;XM_013520582;XM_013520583;XM_013520584;XM_013520585;XM_013520586;XM_013520587;XM_013520588;XM_013520589;XM_013520590;XM_013520591;XM_013520592;XM_013520593 XP_013376036;XP_013376037;XP_013376038;XP_013376039;XP_013376040;XP_013376041;XP_013376042;XP_013376043;XP_013376044;XP_013376045;XP_013376046;XP_013376047 MODEL 9044015 protein-coding Rgs13 regulator of G protein signaling 13 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955406 30111770 30134605 + 102017840 AGCD01006358;AGCD01006359;GBDI01160957;XM_005375099;XM_005375100;XM_013521830 XP_005375156;XP_005375157;XP_013377284 MODEL 8756103 pseudo LOC102006269 cytochrome b-c1 complex subunit Rieske, mitochondrial-like NW_004955432 23785334 23799271 + 102006269 AGCD01031294;AGCD01031295 MODEL 8851553 pseudo LOC102009321 MORC family CW-type zinc finger protein 2A pseudogene NW_004955438 6361423 6366279 + 102009321 AGCD01035101 MODEL 8944979 pseudo LOC102029829 39S ribosomal protein L22, mitochondrial pseudogene NW_004955457 8708246 8708883 + 102029829 AGCD01046915 MODEL 8811701 pseudo LOC102025920 bleomycin hydrolase pseudogene NW_004955422 24103732 24105230 - 102025920 AGCD01023215 MODEL 39132321 rrna 5S_rRNA 5S ribosomal RNA 8724121 protein-coding LOC102022037 serine protease 55-like NW_004955403 52114823 52124047 - 102022037 AGCD01003001;AGCD01003002;GBDF01002536;XM_013514424;XM_013514426;XM_013514430 XP_013369878;XP_013369880;XP_013369884 MODEL 8912896 protein-coding Dusp19 dual specificity phosphatase 19 ENCODES a protein that exhibits JUN kinase phosphatase activity (ortholog); MAP kinase scaffold activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); INVOLVED IN JNK cascade (ortholog); negative regulation of JNK cascade (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955403 14421057 14439829 - 102016010 AGCD01081636;GBDK01039617;XM_005373344 XP_005373401 MODEL 8796837 protein-coding Bcar3 BCAR3 adaptor protein, NSP family member ENCODES a protein that exhibits kinase binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN endothelin receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); membrane (ortholog) NW_004955423 991046 1105033 + 102012102 AGCD01023426;AGCD01023427;AGCD01023428;GBCQ01122548;GBDI01163711;XM_013514437 XP_013369891 MODEL 39131692 rrna 5S_rRNA 5S ribosomal RNA 8840427 protein-coding LOC102024116 olfactory receptor 50-like NW_004955419 5579409 5580775 - 102024116 AGCD01019825;XM_005382924;XM_013513121 XP_005382981;XP_013368575 MODEL 8964898 protein-coding Derl3 derlin 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signal recognition particle binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955455 8415868 8418753 + 102010869 AGCD01045891;GBDI01131857;XM_005396416;XM_005396417 XP_005396473;XP_005396474 MODEL 8859774 protein-coding Foxf2 forkhead box F2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic camera-type eye morphogenesis (ortholog); embryonic digestive tract development (ortholog); establishment of planar polarity of embryonic epithelium (ortholog); ASSOCIATED WITH stroke (ortholog); urinary bladder cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955465 11740374 11744619 - 102025101 AGCD01050533;GBBH01062472;GBDK01190171;XM_013521862 XP_013377316 MODEL 39134491 misc_rna 7SK 7SK RNA 8733104 protein-coding Siah3 siah E3 ubiquitin protein ligase family member 3 INVOLVED IN negative regulation of protein localization to mitochondrion (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955518 3473120 3539086 - 102016738 AGCD01067804;AGCD01067805;GBDF01111139;XM_005409091;XM_013506955;XR_001231838 XP_005409148;XP_013362409 MODEL 9058903 protein-coding Taf7l TATA-box binding protein associated factor 7 like INVOLVED IN flagellated sperm motility (ortholog); spermatid development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); oligospermia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955503 7429876 7451051 - 102024933 AGCD01064790;AGCD01064791;GBDK01149160;XM_005406947;XM_005406949;XM_013505851 XP_005407004;XP_005407006;XP_013361305 MODEL 730469397 misc_rna XIST_intron XIST 3' intron conserved motif 8952717 pseudo LOC102012956 septin-2 pseudogene NW_004955474 8331644 8332821 - 102012956 AGCD01054549 MODEL 8902663 protein-coding Dcst1 DC-STAMP domain containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); sperm-egg recognition (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955545 1529926 1545459 + 102022859 AGCD01071859;GBDF01089916;XM_005411560;XM_005411562;XM_005411566 XP_005411617;XP_005411619;XP_005411623 MODEL 8979090 protein-coding LOC102005559 FUN14 domain-containing protein 1-like NW_004955406 23472527 23473294 - 102005559 AGCD01006171;GBDF01050560;XM_005375060 XP_005375117 MODEL 9047719 protein-coding Pole4 DNA polymerase epsilon 4, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN ATAC complex (ortholog); epsilon DNA polymerase complex (ortholog); nucleoplasm (ortholog) NW_004955424 10839639 10844985 - 102018742 AGCD01024531;GBDI01113587;XM_005385473 XP_005385530 MODEL 8802498 protein-coding LOC102025923 zinc finger protein 561-like NW_004955495 1061087 1095931 - 102025923 AGCD01061671;AGCD01061672;AGCD01061673;GBDF01305511;XM_013505080;XM_013505081 XP_013360534;XP_013360535 MODEL 8710322 pseudo LOC102003411 nuclease-sensitive element-binding protein 1 pseudogene NW_004955454 11898396 11903297 + 102003411 AGCD01045401;AGCD01045402;XR_262803 MODEL 8799538 protein-coding Timm8b translocase of inner mitochondrial membrane 8 homolog B PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955412 13766532 13768453 - 102026956 AGCD01012845;GBDF01002080;XM_005378108 XP_005378165 MODEL 39133935 misc_rna 7SK 7SK RNA 8826602 protein-coding LOC102010478 translation initiation factor IF-2-like NW_004955415 26656571 26658785 + 102010478 AGCD01016602;GBDF01082702;XM_013512111 XP_013367565 MODEL 8860011 pseudo LOC102007795 zinc finger FYVE domain-containing protein 1 pseudogene NW_004955429 6957166 6968391 + 102007795 AGCD01028571;AGCD01028572 MODEL 8704333 ncrna LOC102011284 uncharacterized LOC102011284 NW_004955460 12592756 12593305 - 102011284 AGCD01048661;GBDF01041740;XR_263061 MODEL 8946332 pseudo LOC102006657 anion exchange transporter-like NW_004955474 8327235 8329031 - 102006657 AGCD01054549 MODEL 9041909 protein-coding Efcab6 EF-hand calcium binding domain 6 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 28569080 28783455 - 102018278 AGCD01014561;AGCD01014562;AGCD01014563;AGCD01014564;AGCD01014565;AGCD01014566;AGCD01014567;GBDF01009010;XM_005379444;XM_005379445 XP_005379501;XP_005379502 MODEL 8805579 protein-coding Cttnbp2 cortactin binding protein 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN regulation of modification of postsynaptic actin cytoskeleton (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN dendritic spine (ortholog); FAR/SIP/STRIPAK complex (ortholog); glutamatergic synapse (ortholog) NW_004955432 23364193 23527300 - 102005956 AGCD01031283;AGCD01031284;AGCD01031285;AGCD01031286;GBDK01323978;XM_005388158 XP_005388215 MODEL 8849818 ncrna LOC102009325 uncharacterized LOC102009325 NW_004955442 15855701 15859607 - 102009325 AGCD01037883;GBDF01303907;XR_262159 MODEL 9030752 protein-coding Coq6 coenzyme Q6, monooxygenase ENCODES a protein that exhibits 2-methoxy-6-polyprenolphenol 4-hydroxylase activity (ortholog); 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955523 1444675 1458769 - 102023838 AGCD01068519;GBCQ01090372;XM_005409410;XR_001231919 XP_005409467 MODEL 9032182 protein-coding LOC102005207 tetratricopeptide repeat protein 30B NW_004955403 19185628 19196278 + 102005207 AGCD01002119;GBCE01133727;XM_005373399 XP_005373456 MODEL 8849290 protein-coding Arl2bp ARF like GTPase 2 binding protein ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955433 14887094 14894119 + 102022529 AGCD01031731;GBBH01089280;XM_005388374 XP_005388431 MODEL 8840530 protein-coding LOC102003764 collagen alpha-1(III) chain-like NW_004955478 11060155 11061599 - 102003764 AGCD01056157;GBCB01001731;XM_005402303 XP_005402360 MODEL 10088067 ncrna LOC106148557 uncharacterized LOC106148557 NW_004955423 324496 334261 + 106148557 AGCD01023411;GBDF01262212;XR_001234118 MODEL 8722367 protein-coding Lrrc74a leucine rich repeat containing 74A ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955438 805119 834335 + 102003283 AGCD01034963;AGCD01034964;GBDF01210386;XM_005390160;XM_005390161;XM_013517175;XM_013517176 XP_005390217;XP_005390218;XP_013372629;XP_013372630 MODEL 8876819 protein-coding LOC102025218 leishmanolysin-like NW_004955409 37199857 37203329 + 102025218 AGCD01010498;GBDF01254756;XM_005377093;XM_005377094 XP_005377150;XP_005377151 MODEL 39132325 rrna 5S_rRNA 5S ribosomal RNA 10360979 ncrna LOC106147468 uncharacterized LOC106147468 NW_004955565 1442730 1448135 + 106147468 AGCD01074318;AGCD01074319;AGCD01074320;GBDJ01342078;XR_001232391 MODEL 8741949 protein-coding Chrd chordin ENCODES a protein that exhibits BMP binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN artery morphogenesis (ortholog); BMP signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955420 23111690 23120038 - 102029405 AGCD01021226;GBBH01113396;GBDJ01402854;XM_013513322;XM_013513323;XM_013513324 XP_013368776;XP_013368777;XP_013368778 MODEL 9035215 protein-coding Ranbp2 RAN binding protein 2 ENCODES a protein that exhibits kinase activator activity (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN centrosome localization (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); NLS-bearing protein import into nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; mitochondria transport pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasmic periphery of the nuclear pore complex (ortholog); nuclear envelope (ortholog) NW_004955470 12180426 12247737 + 102009934 AGCD01052922;AGCD01052923;AGCD01052924;AGCD01052925;GBDF01156107;XM_005400808;XM_005400809;XM_005400811 XP_005400865;XP_005400866;XP_005400868 MODEL 8947506 protein-coding Slc1a6 solute carrier family 1 member 6 ENCODES a protein that exhibits glutamate:sodium symporter activity (ortholog); high-affinity L-glutamate transmembrane transporter activity (ortholog); L-aspartate transmembrane transporter activity (ortholog); INVOLVED IN L-aspartate import across plasma membrane (ortholog); L-glutamate import across plasma membrane (ortholog); L-glutamate transmembrane transport (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955495 8270601 8314874 + 102014259 AGCD01062195;AGCD01062196;AGCD01062197;AGCD01062198;GBDF01224187;XM_005406101;XM_005406102;XM_005406103;XM_005406104 XP_005406158;XP_005406159;XP_005406160;XP_005406161 MODEL 730469004 snorna SNORA51 Small nucleolar RNA SNORA51 8976471 protein-coding Ppm1k protein phosphatase, Mg2+/Mn2+ dependent 1K ENCODES a protein that exhibits [3-methyl-2-oxobutanoate dehydrogenase (lipoamide)]-phosphatase activity (ortholog); manganese ion binding (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); positive regulation of amino acid metabolic process (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); congestive heart failure (ortholog); maple syrup urine disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955474 12229658 12250783 + 102024898 AGCD01054653;GBDI01006145;XM_013502772;XM_013502774 XP_013358226;XP_013358228 MODEL 9015041 protein-coding Rab11a RAB11A, member RAS oncogene family ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); G protein activity (ortholog); GTP binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); astral microtubule organization (ortholog); endocytic recycling (ortholog); PARTICIPATES IN autophagy pathway; eicosanoid signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Adducted Thumbs Syndrome (ortholog); anxiety disorder (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955450 9638761 9656291 - 102030586 AGCD01042594;GBCQ01006854;XM_005393706 XP_005393763 MODEL 8805417 protein-coding Calhm5 calcium homeostasis modulator family member 5 ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); regulation of artery smooth muscle contraction (ortholog); FOUND IN plasma membrane (ortholog) NW_004955526 203971 213328 - 102025614 AGCD01069215;GBDI01311146;XM_005409741 XP_005409798 MODEL 405822144 snorna SNORD56 Small nucleolar RNA SNORD56 8971448 protein-coding Tsks testis specific serine kinase substrate ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); myoepithelioma (ortholog); FOUND IN centriole (ortholog) NW_004955559 1151247 1162856 + 102004756 AGCD01073632;GBCE01108010;XM_005412834;XM_005412835;XM_005412836;XM_005412837;XM_005412838;XM_005412839;XM_005412840;XM_005412841;XM_005412843;XM_005412845 XP_005412891;XP_005412892;XP_005412893;XP_005412894;XP_005412895;XP_005412896;XP_005412897;XP_005412898;XP_005412900;XP_005412902 MODEL 8981518 protein-coding Ptk2b protein tyrosine kinase 2 beta ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); enzyme binding (ortholog); INVOLVED IN actin filament organization (ortholog); activation of GTPase activity (ortholog); activation of Janus kinase activity (ortholog); PARTICIPATES IN endothelin signaling pathway; fibroblast growth factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cell body (ortholog) NW_004955403 49856056 49970800 + 102003931 AGCD01002951;AGCD01002952;AGCD01002953;GBCE01000568;XM_005373738;XM_005373739;XM_005373740;XM_005373741;XM_013514189;XM_013514191 XP_005373795;XP_005373796;XP_005373797;XP_005373798;XP_013369643;XP_013369645 MODEL 8863548 protein-coding Ccdc90b coiled-coil domain containing 90B ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955414 9329210 9349875 + 102025676 AGCD01015018;AGCD01015019;GBDF01120296;XM_005379796 XP_005379853 MODEL 8823883 protein-coding Exoc3l4 exocyst complex component 3 like 4 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955538 2140599 2155781 + 102006709 AGCD01071101;AGCD01071102;GBDI01338301;XM_005410766;XM_005410767;XM_005410768;XM_005410769;XM_005410770;XM_005410771 XP_005410823;XP_005410824;XP_005410825;XP_005410826;XP_005410827;XP_005410828 MODEL 8937841 protein-coding Ints11 integrator complex subunit 11 ENCODES a protein that exhibits RNA endonuclease activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA 3'-end processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) NW_004955486 9479057 9491629 + 102026531 AGCD01059188;GBBH01141476;XM_005404242 XP_005404299 MODEL 39131693 rrna 5S_rRNA 5S ribosomal RNA 8832879 protein-coding LOC102006272 zinc finger protein 474-like NW_004955521 253407 305771 + 102006272 AGCD01068134;GBDJ01215638;XM_005409288;XM_013507095;XM_013507096 XP_005409345;XP_013362549;XP_013362550 MODEL 8722832 protein-coding Eloa elongin A INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN elongin complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 3668868 3681506 + 102018252 AGCD01043934;GBDF01087483;XM_013519496 XP_013374950 MODEL 8841742 protein-coding Rgs14 regulator of G protein signaling 14 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); GTPase activating protein binding (ortholog); INVOLVED IN cell division (ortholog); chromosome segregation (ortholog); learning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955408 29602654 29616793 + 102024093 AGCD01008765;GBDI01222250;XM_005376427 XP_005376484 MODEL 8879931 pseudo LOC102022038 nucleophosmin pseudogene NW_004955403 53663363 53664371 + 102022038 AGCD01003067 MODEL 8913595 pseudo LOC102018717 cullin-2 pseudogene NW_004955472 6363888 6365161 - 102018717 AGCD01053598 MODEL 8865674 pseudo LOC102012558 non-histone chromosomal protein HMG-17 pseudogene NW_004955426 25793912 25801578 + 102012558 AGCD01026728 MODEL 8703803 protein-coding Arl3 ARF like GTPase 3 ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cilium assembly (ortholog); Golgi to plasma membrane transport (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955485 7739556 7772582 + 102013508 AGCD01058674;AGCD01058675;GBDK01131229;XM_005403829 XP_005403886 MODEL 8873382 protein-coding Dusp2 dual specificity phosphatase 2 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955470 3735224 3737667 - 102025900 AGCD01052708;AGCD01052709;GBBH01228596;GBDI01186539;XM_013522699 XP_013378153 MODEL 8771331 ncrna LOC102003412 uncharacterized LOC102003412 NW_004955407 34652125 34732104 - 102003412 AGCD01007724;AGCD01007725;GBDF01014151;XR_001231192;XR_259607 MODEL 8728391 protein-coding Sack1c scaffolding CK1 anchoring protein C ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 26106053 26112548 + 102013731 AGCD01023275;GBBH01014061;XM_005384800 XP_005384857 MODEL 39133936 misc_rna 7SK 7SK RNA 8707331 protein-coding Bcas1 brain enriched myelin associated protein 1 INVOLVED IN myelination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); synapse (ortholog) NW_004955445 4951645 5049925 + 102015058 AGCD01039434;AGCD01039435;AGCD01039436;AGCD01039437;GBDJ01021202;XM_005392286;XM_013518334;XM_013518335 XP_005392343;XP_013373788;XP_013373789 MODEL 8732875 ncrna LOC102007798 uncharacterized LOC102007798 NW_004955430 5482042 5492358 + 102007798 AGCD01029262;XR_261417 MODEL 8774521 ncrna LOC102010491 uncharacterized LOC102010491 NW_004955486 2457928 2464475 + 102010491 AGCD01058997;GBDF01144358;XR_263941 MODEL 8771950 protein-coding Sidt1 SID1 transmembrane family member 1 ENCODES a protein that exhibits cholesterol binding (ortholog); double-stranded RNA binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955427 13649216 13747983 + 102021028 AGCD01027254;AGCD01027255;AGCD01027256;AGCD01027257;GBBH01198041;GBCE01010856;XM_005386616 XP_005386673 MODEL 8709854 protein-coding Ptk6 protein tyrosine kinase 6 ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell migration (ortholog); cellular response to retinoic acid (ortholog); intestinal epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955528 687996 695596 + 102009754 AGCD01069542;GBCQ01083858;XM_005409962 XP_005410019 MODEL 8878194 protein-coding Taf8 TATA-box binding protein associated factor 8 INVOLVED IN DNA-templated transcription open complex formation (ortholog); inner cell mass cell proliferation (ortholog); maintenance of protein location in nucleus (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 8317437 8328544 + 102020049 AGCD01034485;AGCD01034486;GBDK01233514;XM_005389711;XM_005389713;XM_013516780;XM_013516781 XP_005389768;XP_005389770;XP_013372234;XP_013372235 MODEL 730469015 misc_rna XIST_intron XIST 3' intron conserved motif 8903338 pseudo LOC102006273 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial pseudogene NW_004955522 3958620 3960291 + 102006273 AGCD01068410 MODEL 9060732 ncrna LOC102009328 uncharacterized LOC102009328 NW_004955558 871030 888543 + 102009328 AGCD01073396;AGCD01073397;AGCD01073398;AGCD01073399;GBDF01225099;XR_001232328;XR_001232329 MODEL 8826422 protein-coding Efcab7 EF-hand calcium binding domain 7 INVOLVED IN positive regulation of protein import into nucleus (ortholog); positive regulation of protein localization to ciliary membrane (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955423 26473310 26510704 - 102004495 AGCD01024097;GBCB01077144;XM_005385327;XM_005385328;XM_005385329;XM_005385330 XP_005385384;XP_005385385;XP_005385386;XP_005385387 MODEL 8932486 protein-coding Dcst2 DC-STAMP domain containing 2 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955545 1518917 1529865 - 102017917 AGCD01071858;AGCD01071859;GBDF01192050;XM_005411539;XM_005411540;XM_013508299;XM_013508301;XM_013508302;XM_013508303;XM_013508304 XP_005411596;XP_005411597;XP_013363753;XP_013363755;XP_013363756;XP_013363757;XP_013363758 MODEL 8720263 pseudo LOC102025925 stathmin pseudogene NW_004955500 7348048 7348466 + 102025925 AGCD01063916 MODEL 8834238 protein-coding Polg DNA polymerase gamma, catalytic subunit ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-deoxyribose-5-phosphate lyase activity (ortholog); chromatin binding (ortholog); INVOLVED IN base-excision repair (ortholog); base-excision repair, gap-filling (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); Abnormal Reflexes (ortholog); Acute Liver Failure (ortholog); FOUND IN gamma DNA polymerase complex (ortholog); mitochondrial chromosome (ortholog); mitochondrial matrix (ortholog) NW_004955416 15773005 15788736 + 102003340 AGCD01017343;GBDI01169870;XM_005381556 XP_005381613 MODEL 8943205 protein-coding Timm9 translocase of inner mitochondrial membrane 9 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); unfolded protein holdase activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) NW_004955466 12115003 12125024 - 102005688 AGCD01051113;GBCE01045930;XM_005399218;XM_005399219;XM_013521977 XP_005399275;XP_005399276;XP_013377431 MODEL 9004183 pseudo LOC102024122 casein kinase I isoform alpha pseudogene NW_004955421 547617 566169 + 102024122 AGCD01021566 MODEL 10375207 ncrna LOC106147469 uncharacterized LOC106147469 NW_004955565 1607630 1615612 + 106147469 AGCD01074328;GBDI01193799;XR_001232392 MODEL 39134492 misc_rna 7SK 7SK RNA 9055052 protein-coding Slc1a7 solute carrier family 1 member 7 ENCODES a protein that exhibits extracellularly glutamate-gated chloride channel activity (ortholog); glutamate:sodium symporter activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); L-glutamate transmembrane transport (ortholog); monoatomic anion transmembrane transport (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); photoreceptor cell terminal bouton (ortholog) NW_004955464 6032629 6069483 + 102013395 AGCD01050017;GBBH01023325;XM_005398562 XP_005398619 MODEL 8773591 protein-coding LOC102018719 phospholipid scramblase 2-like NW_004955474 10991013 11067397 + 102018719 AGCD01054605;AGCD01054606;AGCD01054607;AGCD01054608;GBDF01044008;XM_005401433;XM_005401434;XM_005401435;XM_005401436 XP_005401490;XP_005401491;XP_005401492;XP_005401493 MODEL 8942065 pseudo LOC102029833 poly(rC)-binding protein 2-like NW_004955410 35179025 35202234 + 102029833 AGCD01011410 MODEL 8827310 protein-coding Tsku tsukushi, small leucine rich proteoglycan ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); camera-type eye development (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 15166349 15178284 - 102013919 AGCD01015181;GBBH01001334;XM_005379848;XM_005379849 XP_005379905;XP_005379906 MODEL 9045847 protein-coding Des desmin ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN intermediate filament organization (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 9 (ortholog); FOUND IN cardiac myofibril (ortholog); cell tip (ortholog); cell-cell junction (ortholog) NW_004955453 14039502 14046572 - 102006976 AGCD01044857;GBDK01160362;XM_005395527 XP_005395584 MODEL 39133191 snrna U4 U4 spliceosomal RNA 8995004 pseudo LOC102012958 retinol dehydrogenase 14 pseudogene NW_004955476 11736864 11740171 - 102012958 AGCD01055474 MODEL 8826450 protein-coding Exoc4 exocyst complex component 4 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); cilium assembly (ortholog); establishment of cell polarity (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colorectal Cancer 10 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cell leading edge (ortholog); centrosome (ortholog) NW_004955410 33937825 34672790 - 102005013 AGCD01011393;AGCD01011394;AGCD01011395;AGCD01011396;AGCD01011397;AGCD01011398;AGCD01011399;AGCD01011400;AGCD01011401;AGCD01011402;AGCD01011403;GBCE01044996;XM_005377540;XM_013510636 XP_005377597;XP_013366090 MODEL 8945640 ncrna LOC102006658 uncharacterized LOC102006658 NW_004955415 30510340 30526011 + 102006658 AGCD01016664;GBDF01195211;XR_001233255;XR_001233256;XR_001233257;XR_001233258 MODEL 8734059 pseudo LOC102005209 peptidyl-prolyl cis-trans isomerase D pseudogene NW_004955762 7725 8459 + 102005209 AGCD01078304 MODEL 8741413 protein-coding Coq7 coenzyme Q7, hydroxylase ENCODES a protein that exhibits 3-demethoxyubiquinone 3-hydroxylase (NADH) activity (ortholog); chromatin binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); determination of adult lifespan (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 9 (ortholog); Cachexia (ortholog); Carcinoma, Lewis Lung (ortholog); FOUND IN chromosome (ortholog); extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955442 3026458 3033582 - 102005306 AGCD01037492;GBDJ01421075;XM_005391098;XM_005391099 XP_005391155;XP_005391156 MODEL 39132327 rrna 5S_rRNA 5S ribosomal RNA 730469055 snorna SNORA51 Small nucleolar RNA SNORA51 8836229 protein-coding Xk X-linked Kx blood group antigen, Kell and VPS13A binding protein ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); intracellular magnesium ion homeostasis (ortholog); myelination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arthralgia (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955587 668871 725829 + 102011713 AGCD01076069;GBCB01097779;XM_005414450 XP_005414507 MODEL 8853523 ncrna LOC102012559 uncharacterized LOC102012559 NW_004955427 8687167 8694960 + 102012559 AGCD01027076;GBDF01110884;XR_001234415;XR_261242 MODEL 9010206 protein-coding Efcab8 EF-hand calcium binding domain 8 NW_004955422 28269996 28337345 - 102005054 AGCD01023345;GBDF01299149;XM_013514341;XM_013514342;XM_013514343;XM_013514344 XP_013369795;XP_013369796;XP_013369797;XP_013369798 MODEL 39133453 snorna SNORD58 Small nucleolar RNA SNORD58 39131481 protein-coding FOXG1 forkhead box G1 8854701 protein-coding Arl4a ARF like GTPase 4A ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955410 16400342 16403200 + 102017314 AGCD01010960;GBCE01052668;XM_005377323 XP_005377380 MODEL 8789675 protein-coding Dusp21 dual specificity phosphatase 21 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) NW_004955516 3369548 3370403 - 102003795 AGCD01067490;GBDF01156584;XM_005408994 XP_005409051 MODEL 39131694 rrna 5S_rRNA 5S ribosomal RNA 39133800 misc_rna 7SK 7SK RNA 8948477 protein-coding Cttnbp2nl CTTNBP2 N-terminal like ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); INVOLVED IN negative regulation of transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); FAR/SIP/STRIPAK complex (ortholog) NW_004955435 15858056 15910486 + 102030233 AGCD01033287;AGCD01033288;AGCD01033289;GBCQ01153403;XM_005388955;XM_005388956;XM_005388957 XP_005389012;XP_005389013;XP_005389014 MODEL 8873723 protein-coding Elob elongin B ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); target-directed miRNA degradation (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Familial Prostate Cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); elongin complex (ortholog) NW_004955442 14498666 14501895 - 102015897 AGCD01037821;GBCQ01007574;GBDF01006908;XM_005391402 XP_005391459 MODEL 9042866 protein-coding LOC102003769 protein NipSnap homolog 3A-like NW_004955419 21692598 21700920 - 102003769 AGCD01020281;GBCB01039739;GBDK01115357;XM_013513175 XP_013368629 MODEL 9044027 protein-coding Rgs16 regulator of G protein signaling 16 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955406 21439536 21444822 - 102018361 AGCD01006128;GBDI01354177;XM_005375005 XP_005375062 MODEL 10283071 ncrna LOC106148558 uncharacterized LOC106148558 NW_004955423 23112931 23145220 - 106148558 AGCD01023994;GBBH01177181;XR_001234120;XR_001234121;XR_001234122 MODEL 8918608 pseudo LOC102022041 eukaryotic initiation factor 4A-II pseudogene NW_004955404 24517244 24519261 + 102022041 AGCD01003820 MODEL 8723254 protein-coding Chrdl1 chordin like 1 ENCODES a protein that exhibits BMP binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); BMP signaling pathway (ortholog); cell fate determination (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); megalocornea (ortholog); FOUND IN extracellular region (ortholog) NW_004955490 5108308 5218679 + 102006922 AGCD01060203;GBCE01116210;XM_005404651;XM_005404652;XM_005404653;XM_005404654;XM_013504551;XM_013504552 XP_005404708;XP_005404709;XP_005404710;XP_005404711;XP_013360005;XP_013360006 MODEL 8745670 protein-coding Ptk7 protein tyrosine kinase 7 (inactive) ENCODES a protein that exhibits ATP binding (ortholog); kinase activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axis elongation (ortholog); cell migration (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN cell-cell junction (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955437 9037933 9094237 + 102019323 AGCD01034515;GBDK01100991;XM_005390133;XM_013516906 XP_005390190;XP_013372360 MODEL 8815608 protein-coding Ppm1l protein phosphatase, Mg2+/Mn2+ dependent 1L ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); obesity (ortholog) NW_004955448 11265988 11548258 + 102006184 AGCD01041520;AGCD01041521;AGCD01041522;AGCD01041523;AGCD01041524;AGCD01041525;AGCD01041526;AGCD01041527;GBCE01057334;GBCE01057335;XM_005393125 XP_005393182 MODEL 10332444 protein-coding Taf9 TATA-box binding protein associated factor 9 ENCODES a protein that exhibits ATPase binding (ortholog); C2H2 zinc finger domain binding (ortholog); DNA binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955575 74506 76272 - 106146233 AGCD01075200;XM_013509601 XP_013365055 MODEL 8855067 pseudo LOC102003415 keratinocyte-associated protein 2-like NW_004955457 11849410 11853825 + 102003415 AGCD01046988 MODEL 10276254 ncrna LOC106147470 uncharacterized LOC106147470 NW_004955566 1104685 1106212 - 106147470 AGCD01074354;AGCD01074355;GBDK01198338;XR_001232393 MODEL 8908894 protein-coding Ints12 integrator complex subunit 12 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nuclear body (ortholog) NW_004955496 3564548 3580178 + 102008746 AGCD01062296;GBDF01052169;XM_005406221 XP_005406278 MODEL 39134493 misc_rna 7SK 7SK RNA 8868070 protein-coding Bcas2 BCAS2 pre-mRNA processing factor INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); dendrite development (ortholog); dendrite morphogenesis (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH breast cancer (ortholog); diffuse large B-cell lymphoma (ortholog); esophageal cancer (ortholog); FOUND IN DNA replication factor A complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955435 17830532 17857360 - 102018761 AGCD01033373;AGCD01033374;AGCD01033375;GBCB01023597;XM_005389000;XM_013516556 XP_005389057;XP_013372010 MODEL 8857645 protein-coding Foxg1 forkhead box G1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous system neuron development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); Agenesis of Corpus Callosum (ortholog); Apnea (ortholog); FOUND IN nucleus (ortholog) NW_004955409 31672960 31674970 - 102015296 AGCD01010335;GBDF01128055;GBDF01128056;XM_013510456 XP_013365910 MODEL 8888259 ncrna LOC102018720 uncharacterized LOC102018720 NW_004955415 16882130 16886583 - 102018720 AGCD01016404;XR_260301 MODEL 8837294 ncrna LOC102029834 uncharacterized LOC102029834 NW_004955464 4819483 4825621 + 102029834 AGCD01049995;GBDF01045560;XR_001236711;XR_001236712;XR_001236713;XR_001236714 MODEL 8855679 protein-coding Lrrc74b leucine rich repeat containing 74B ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955442 19272350 19296090 + 102021714 AGCD01038045;AGCD01038046;AGCD01038047;AGCD01038048;AGCD01038049;GBDF01016721;XM_013517985 XP_013373439 MODEL 8822192 pseudo LOC102025222 luc7-like protein 3 NW_004955411 35479981 35483380 - 102025222 AGCD01012433 MODEL 39133086 snrna U4 U4 spliceosomal RNA 39131695 rrna 5S_rRNA 5S ribosomal RNA 8889200 protein-coding Desi1 desumoylating isopeptidase 1 ENCODES a protein that exhibits deSUMOylase activity (ortholog); identical protein binding (ortholog); importin-alpha family protein binding (ortholog); INVOLVED IN protein desumoylation (ortholog); protein export from nucleus (ortholog); regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955413 27115130 27135625 - 102021117 AGCD01014495;GBDK01134746;XM_005379358;XM_005379359 XP_005379415;XP_005379416 MODEL 9031441 protein-coding Sidt2 SID1 transmembrane family member 2 ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); glucose homeostasis (ortholog); regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog); plasma membrane (ortholog) NW_004955412 18505453 18521667 + 102024322 AGCD01012944;GBDJ01139640;XM_005378196;XM_005378197 XP_005378253;XP_005378254 MODEL 8768279 ncrna LOC102006276 uncharacterized LOC102006276 NW_004955435 16129063 16131676 + 102006276 AGCD01033295;GBCB01093390;XR_001234853;XR_261702 MODEL 8741746 protein-coding Ranbp3 RAN binding protein 3 ENCODES a protein that exhibits R-SMAD binding (ortholog); small GTPase binding (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 3495179 3549528 + 102020134 AGCD01061861;AGCD01061862;GBDF01011028;XM_005405743;XM_005405744;XM_005405745;XM_005405746;XM_005405747;XM_005405748;XM_005405749;XM_013505313 XP_005405800;XP_005405801;XP_005405802;XP_005405803;XP_005405804;XP_005405805;XP_005405806;XP_013360767 MODEL 8847126 ncrna LOC102009338 uncharacterized LOC102009338 NW_004955403 20129167 20220568 - 102009338 AGCD01002154;XR_259187 MODEL 8768761 protein-coding Exoc5 exocyst complex component 5 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); establishment of planar polarity (ortholog); kidney development (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary base (ortholog); midbody (ortholog) NW_004955466 11115902 11191353 - 102026304 AGCD01051084;AGCD01051085;GBDF01013286;XM_005399204;XM_013521923;XM_013521924 XP_005399261;XP_013377377;XP_013377378 MODEL 8805071 protein-coding Rab11b RAB11B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); cellular response to acidic pH (ortholog); constitutive secretory pathway (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); genetic disease (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); phagocytic vesicle (ortholog) NW_004955563 1008267 1017315 - 102014839 AGCD01074102;AGCD01074103;AGCD01074104;GBBH01031204;GBCE01001173;XM_005413131 XP_005413188 MODEL 8771225 protein-coding Dcstamp dendrocyte expressed seven transmembrane protein INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to macrophage colony-stimulating factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog) NW_004955417 28156046 28169481 + 102022816 AGCD01018574;GBDK01042204;XM_005381952;XM_013512745 XP_005382009;XP_013368199 MODEL 8891514 protein-coding Coq8a coenzyme Q8A ENCODES a protein that exhibits ADP binding (ortholog); enzyme activator activity (ortholog); kinase activity (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Ataxia (ortholog); atrial heart septal defect (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955406 10180415 10217450 - 102013047 AGCD01005849;GBCB01004411;XM_005374797 XP_005374854 MODEL 8737796 ncrna LOC102025931 uncharacterized LOC102025931 NW_004955508 6197605 6201892 - 102025931 AGCD01065917;GBDF01303522;XR_001231647 MODEL 10358997 ncrna LOC106148559 uncharacterized LOC106148559 NW_004955423 8775890 8781850 - 106148559 AGCD01023637;AGCD01023638;AGCD01023639;XR_001234124 MODEL 9031823 protein-coding Ccdc91 coiled-coil domain containing 91 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN Golgi to lysosome transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); trans-Golgi network (ortholog) NW_004955505 6269667 6613191 - 102016827 AGCD01065168;AGCD01065169;AGCD01065170;AGCD01065171;AGCD01065172;AGCD01065173;AGCD01065174;AGCD01065175;AGCD01065176;AGCD01065177;AGCD01065178;AGCD01065179;AGCD01065180;GBCB01043003;XM_005407144;XM_005407146;XM_005407149;XM_005407150;XM_005407151;XM_013505940;XM_013505941;XM_013505942;XM_013505943;XM_013505944;XM_013505945;XM_013505946;XM_013505947;XM_013505948;XM_013505949 XP_005407201;XP_005407203;XP_005407206;XP_005407207;XP_005407208;XP_013361394;XP_013361395;XP_013361396;XP_013361397;XP_013361398;XP_013361399;XP_013361400;XP_013361401;XP_013361402;XP_013361403 MODEL 8863835 ncrna LOC102005562 uncharacterized LOC102005562 NW_004955455 10714691 10715717 + 102005562 AGCD01045961;GBDJ01194372;XR_262853 MODEL 8857531 protein-coding Sack1d scaffolding CK1 anchoring protein D ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH glioblastoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955445 17837099 17861421 - 102007604 AGCD01039896;AGCD01039897;GBDI01089938;XM_005392523 XP_005392580 MODEL 8744578 protein-coding Polg2 DNA polymerase gamma 2, accessory subunit ENCODES a protein that exhibits DNA polymerase binding (ortholog); DNA polymerase processivity factor activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); in utero embryonic development (ortholog); mitochondrial DNA metabolic process (ortholog); ASSOCIATED WITH autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ortholog); Experimental Diabetes Mellitus (ortholog); mitochondrial DNA depletion syndrome 16 (ortholog); FOUND IN gamma DNA polymerase complex (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955478 7376240 7396647 + 102027847 AGCD01055959;AGCD01055960;GBBH01117427;GBDI01128987;XM_013503174;XM_013503175 XP_013358628;XP_013358629 MODEL 10156556 protein-coding Ptma prothymosin alpha ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenoma (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955453 4036503 4037788 - 106149798 AGCD01044672;GBBH01002333;GBDF01000055;XM_013519995 XP_013375449 MODEL 8982872 protein-coding Xkr4 XK related 4 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine exposure on apoptotic cell surface (ortholog); ASSOCIATED WITH melanoma (ortholog); Mesothelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955454 14311466 14704334 + 102006978 AGCD01045469;AGCD01045470;AGCD01045471;AGCD01045472;AGCD01045473;AGCD01045474;AGCD01045475;AGCD01045476;GBBH01053233;XM_005396125 XP_005396182 MODEL 8737996 ncrna LOC102007799 uncharacterized LOC102007799 NW_004955431 12189719 12210492 + 102007799 AGCD01030254;GBDF01124095;XR_261466;XR_261467 MODEL 8996869 protein-coding Tslig1 tRNA splicing ligase complex subunit 1 ENCODES a protein that exhibits protein guanylyltransferase activity (ortholog); RNA ligase (GTP) activity (ortholog); INVOLVED IN IRE1-mediated unfolded protein response (ortholog); mRNA splicing, via endonucleolytic cleavage and ligation (ortholog); RNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955452 10944281 10955250 - 102026285 AGCD01044317;GBDJ01080976;XM_005395081;XM_005395082;XM_013519548 XP_005395138;XP_005395139;XP_013375002 MODEL 9019112 protein-coding Slc20a1 solute carrier family 20 member 1 ENCODES a protein that exhibits high-affinity phosphate:sodium symporter activity (ortholog); sodium:phosphate symporter activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); cell population proliferation (ortholog); phosphate ion transport (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Calcification of Aortic Valve (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955470 1634470 1649234 - 102025232 AGCD01052650;AGCD01052651;GBDF01188180;XM_005400598 XP_005400655 MODEL 9013062 protein-coding Arl4c ARF like GTPase 4C ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN endocytic recycling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955453 1799917 1803498 + 102030149 AGCD01044619;GBCE01172355;GBCQ01064232;XM_005395330 XP_005395387 MODEL 9066441 protein-coding Calhm6 calcium homeostasis modulator family member 6 ENCODES a protein that exhibits voltage-gated channel activity (ortholog); INVOLVED IN ATP export (ortholog); regulation of natural killer cell cytokine production (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN immunological synapse (ortholog); plasma membrane (ortholog) NW_004955526 319920 321985 - 102028227 AGCD01069223;GBDI01327371;XM_005415313 XP_005415370 MODEL 39133801 misc_rna 7SK 7SK RNA 8899858 pseudo LOC102006665 10 kDa heat shock protein, mitochondrial pseudogene NW_004955482 8898964 8899780 - 102006665 AGCD01057555 MODEL 8862284 protein-coding LOC102010492 zinc finger protein 660 NW_004955420 26897949 26926759 - 102010492 AGCD01021435;GBDF01039917;XM_005383479;XM_013513416;XM_013513417;XM_013513418;XM_013513419;XM_013513420;XM_013513421;XM_013513422;XM_013513423 XP_005383536;XP_013368870;XP_013368871;XP_013368872;XP_013368873;XP_013368874;XP_013368875;XP_013368876;XP_013368877 MODEL 8728732 pseudo LOC102005210 bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA pseudogene NW_004955403 36749260 36750838 + 102005210 AGCD01002547 MODEL 39132328 rrna 5S_rRNA 5S ribosomal RNA 8833359 protein-coding Rgs17 regulator of G protein signaling 17 INVOLVED IN response to amphetamine (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleus (ortholog) NW_004955439 8687775 8805229 + 102025048 AGCD01035806;AGCD01035807;AGCD01035808;AGCD01035809;AGCD01035810;AGCD01035811;AGCD01035812;AGCD01035813;GBDF01116147;XM_005390564;XM_005390565;XM_013517293 XP_005390621;XP_005390622;XP_013372747 MODEL 8772321 protein-coding Timmdc1 translocase of inner mitochondrial membrane domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955427 19208029 19234763 + 102018005 AGCD01027360;AGCD01027361;AGCD01027362;GBDF01223947;XM_005386443;XM_013515089 XP_005386500;XP_013370543 MODEL 8879320 ncrna LOC102003417 uncharacterized LOC102003417 NW_004955409 3940674 3968535 + 102003417 AGCD01009268;AGCD01009269;GBDF01016673;XR_259752 MODEL 8701075 protein-coding Ccdc92 coiled-coil domain containing 92 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH Coronary Disease (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955482 5196238 5206210 + 102011990 AGCD01057323;GBDF01006230;XM_005403014;XM_005403015;XM_005403016;XM_013503548 XP_005403071;XP_005403072;XP_005403073;XP_013359002 MODEL 39134494 misc_rna 7SK 7SK RNA 8721786 pseudo LOC102011286 mitochondrial import inner membrane translocase subunit Tim9 pseudogene NW_004955410 11964895 11965083 - 102011286 AGCD01010838 MODEL 8727994 protein-coding Lrrc75a leucine rich repeat containing 75A NW_004955467 1771857 1820707 - 102029844 AGCD01051287;AGCD01051288;AGCD01051289;GBDF01058932;GBDJ01016844;XM_013522211 XP_013377665 MODEL 8920822 pseudo LOC102029839 U6 snRNA-associated Sm-like protein LSm3 pseudogene NW_004955412 24666503 24666812 - 102029839 AGCD01013121 MODEL 39132713 snrna U4 U4 spliceosomal RNA 8726904 protein-coding Eloc elongin C ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription corepressor binding (ortholog); INVOLVED IN positive regulation of transcription elongation by RNA polymerase II (ortholog); protein ubiquitination (ortholog); target-directed miRNA degradation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); elongin complex (ortholog) NW_004955444 6400721 6415881 + 102020296 AGCD01038864;AGCD01038865;GBDF01004742;XM_005392079;XM_005392080 XP_005392136;XP_005392137 MODEL 9001349 pseudo LOC102003773 60S ribosomal protein L27a pseudogene NW_004955491 6023903 6024578 + 102003773 AGCD01060512 MODEL 730469073 snorna SNORA51 Small nucleolar RNA SNORA51 8844985 pseudo LOC102012564 zinc finger CCHC domain-containing protein 9-like NW_004955506 4557255 4572734 + 102012564 AGCD01065339;AGCD01065340 MODEL 8708805 ncrna LOC102024125 uncharacterized LOC102024125 NW_004955422 26926363 26963457 - 102024125 AGCD01023305;AGCD01023306;AGCD01023307;GBDF01036002;XR_260925 MODEL 8872815 protein-coding Ppm1m protein phosphatase, Mg2+/Mn2+ dependent 1M ENCODES a protein that exhibits manganese ion binding (ortholog); phosphoprotein phosphatase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955532 3854699 3858923 + 102010518 AGCD01070302;GBCB01040412;GBDK01008951;XM_005410373;XM_013507628 XP_005410430;XP_013363082 MODEL 8923153 protein-coding Efcab9 EF-hand calcium binding domain 9 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sensor activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN CatSper complex (ortholog); cytoplasm (ortholog); sperm principal piece (ortholog) NW_004955408 24987401 24993284 + 102025216 AGCD01008627;GBDF01114797;XM_005376337 XP_005376394 MODEL 8907847 protein-coding Taf9b TATA-box binding protein associated factor 9b INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell growth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); intellectual disability (ortholog); FOUND IN transcription factor TFIID complex (ortholog); transcription factor TFTC complex (ortholog) NW_004955557 1607589 1617748 - 102021713 AGCD01073300;GBCQ01153750;XM_005412631 XP_005412688 MODEL 8915499 pseudo LOC102012960 E3 ubiquitin-protein ligase Mdm2 pseudogene NW_004955416 14407621 14422095 - 102012960 AGCD01017262;AGCD01017263;AGCD01017264 MODEL 8834627 ncrna LOC102012565 uncharacterized LOC102012565 NW_004955507 4294100 4350414 + 102012565 AGCD01065647;AGCD01065648;GBDF01133790;XR_001231617;XR_264382 MODEL 8920172 protein-coding Dusp22 dual specificity phosphatase 22 ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein tyrosine kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); intracellular signal transduction (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); filamentous actin (ortholog); leading edge of lamellipodium (ortholog) NW_004955465 12551063 12597386 - 102030165 AGCD01050550;GBCB01021922;XM_005398940;XM_013521850 XP_005398997;XP_013377304 MODEL 8880345 protein-coding Ints13 integrator complex subunit 13 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN centrosome localization (ortholog); mitotic spindle organization (ortholog); protein localization to nuclear envelope (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chloracne (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955413 21779417 21813804 - 102004920 AGCD01014265;AGCD01014266;AGCD01014267;GBCB01003595;XM_005379644 XP_005379701 MODEL 10210341 protein-coding Ctu1 cytosolic thiouridylase subunit 1 ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955558 959819 960369 - 106147428 AGCD01073408;GBCQ01013477;GBDI01384051;XM_013508884 XP_013364338 MODEL 8955422 protein-coding Polh DNA polymerase eta ENCODES a protein that exhibits DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN cellular response to UV-C (ortholog); DNA damage tolerance (ortholog); DNA synthesis involved in DNA repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 9392484 9409186 + 102020609 AGCD01034528;AGCD01034529;GBDF01124027;GBDK01171313;XM_013516824;XM_013516825;XM_013516826 XP_013372278;XP_013372279;XP_013372280 MODEL 9041316 ncrna LOC102018722 uncharacterized LOC102018722 NW_004955476 7403453 7410048 + 102018722 AGCD01055353;GBDF01016286;XR_263625 MODEL 8717640 protein-coding LOC102025226 olfactory receptor 1468-like NW_004955467 13332532 13333473 + 102025226 AGCD01051671;XM_005399734 XP_005399791 MODEL 8899959 protein-coding Bcas3 BCAS3 microtubule associated cell migration factor ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); cellular response to estrogen stimulus (ortholog); positive regulation of endothelial cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN cell leading edge (ortholog); cell periphery (ortholog); cytoplasm (ortholog) NW_004955451 1929857 2450225 + 102009134 AGCD01042999;AGCD01043000;AGCD01043001;AGCD01043002;AGCD01043003;AGCD01043004;AGCD01043005;AGCD01043006;AGCD01043007;AGCD01043008;AGCD01043009;GBBH01077707;GBDJ01275049;XM_013519304 XP_013374758 MODEL 9067959 protein-coding Arl4d ARF like GTPase 4D ASSOCIATED WITH COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955451 16912424 16913447 + 102003084 AGCD01043712;GBCE01116960;GBDF01127683;XM_005394499 XP_005394556 MODEL 39133802 misc_rna 7SK 7SK RNA 8733591 pseudo LOC102010496 normal mucosa of esophagus-specific gene 1 protein pseudogene NW_004955421 23376672 23380513 - 102010496 AGCD01022183 MODEL 9008672 protein-coding Desi2 desumoylating isopeptidase 2 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955406 7881815 7894690 + 102007966 AGCD01005779;GBBH01150375;GBCC01014190;XM_013520388 XP_013375842 MODEL 8824130 protein-coding Calm1 calmodulin 1 ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog) NW_004955438 12842437 12854028 + 102013544 AGCD01035274;AGCD01035275;GBDJ01024189;XM_005390283 XP_005390340 MODEL 39133454 snorna SNORD58 Small nucleolar RNA SNORD58 8710397 protein-coding Chrdl2 chordin like 2 INVOLVED IN cell differentiation (ortholog); negative regulation of BMP signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955414 16986199 17018166 + 102005586 AGCD01015232;AGCD01015233;GBDJ01311671;XM_005379912;XM_005379913 XP_005379969;XP_005379970 MODEL 8933081 protein-coding Exoc6 exocyst complex component 6 INVOLVED IN erythrocyte differentiation (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955425 389940 560683 - 102005729 AGCD01025182;AGCD01025183;AGCD01025184;AGCD01025185;AGCD01025186;GBDF01195546;GBDK01316958;XM_013514880 XP_013370334 MODEL 9067327 protein-coding LOC102005211 mRNA cap guanine-N7 methyltransferase NW_004956021 841 8406 + 102005211 AGCD01078894;GBCC01050559;XM_013510215 XP_013365669 MODEL 8748975 protein-coding Rab11fip1 RAB11 family interacting protein 1 INVOLVED IN negative regulation of adiponectin secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); recycling endosome (ortholog) NW_004955463 13565956 13600016 - 102013808 AGCD01049872;AGCD01049873;AGCD01049874;AGCD01049875;GBCE01186560;XM_005398418;XM_005398419 XP_005398475;XP_005398476 MODEL 10068095 protein-coding LOC106147471 glycine, alanine and asparagine-rich protein-like NW_004955566 1371636 1373667 + 106147471 AGCD01074358;XM_013509212 XP_013364666 MODEL 8942620 protein-coding Rgs18 regulator of G protein signaling 18 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955406 29573127 29594991 + 102016232 AGCD01006335;GBDK01432974;XM_005375096 XP_005375153 MODEL 8946745 protein-coding LOC102025933 olfactory receptor 4C15-like NW_004955511 440386 441357 - 102025933 AGCD01066331;XM_005407944 XP_005408001 MODEL 8876388 protein-coding Coq8b coenzyme Q8B ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN cerebellar Purkinje cell layer morphogenesis (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); anxiety disorder (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955578 615820 635488 + 102007829 AGCD01075489;AGCD01075490;GBDF01022451;XM_005414027;XM_005414028;XM_005414029;XM_005414030;XM_005414031;XM_005414032 XP_005414084;XP_005414085;XP_005414086;XP_005414087;XP_005414088;XP_005414089 MODEL 8923267 protein-coding LOC102005563 chromosome unknown open reading frame, human C5orf52 ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog) NW_004955455 4906038 4911269 + 102005563 AGCD01045705;GBDF01215498;XM_013520307 XP_013375761 MODEL 9000566 protein-coding Ptms parathymosin ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 4376955 4378253 + 102029065 AGCD01013612;GBCQ01007684;GBDJ01018919;XM_013511349 XP_013366803 MODEL 8737186 ncrna LOC102007802 uncharacterized LOC102007802 NW_004955433 6683298 6685871 - 102007802 AGCD01031546;GBDF01076212;XR_261563 MODEL 8986693 pseudo LOC102003418 neuroplastin pseudogene NW_004955409 8959472 8960507 + 102003418 AGCD01009426 MODEL 8872531 protein-coding Tslig2 tRNA splicing ligase complex subunit 2 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); tRNA-splicing ligase complex (ortholog) NW_004955470 10223467 10234309 + 102026964 AGCD01052859;GBDF01118856;XM_005400782 XP_005400839 MODEL 8787019 protein-coding Xkr5 XK related 5 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); ovarian cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 53964767 53981549 + 102007726 AGCD01003082;AGCD01003083;GBBH01134536;XM_005373843;XM_005373845;XM_013514597;XM_013514598;XM_013514601 XP_005373900;XP_005373902;XP_013370051;XP_013370052;XP_013370055 MODEL 39131696 rrna 5S_rRNA 5S ribosomal RNA 8754407 protein-coding Sigirr single Ig and TIR domain containing INVOLVED IN acute-phase response (ortholog); negative regulation of chemokine production (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN membrane (ortholog) NW_004955476 11603375 11610606 + 102023587 AGCD01055466;GBCE01074106;XM_005401866;XM_013502933;XM_013502934;XM_013502935 XP_005401923;XP_013358387;XP_013358388;XP_013358389 MODEL 8898471 protein-coding LOC102022042 chromosome unknown open reading frame, human C1orf216 ASSOCIATED WITH sarcoma (ortholog) NW_004955452 13784336 13789377 - 102022042 AGCD01044435;GBBH01204495;XM_005395155;XM_005395156 XP_005395212;XP_005395213 MODEL 8841398 protein-coding Dusp23 dual specificity phosphatase 23 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955468 11579624 11581975 + 102008210 AGCD01052135;GBCE01025200;XM_005400175;XM_013522499 XP_005400232;XP_013377953 MODEL 8719141 protein-coding LOC102009339 netrin receptor UNC5D-like NW_004955775 2794 4739 - 102009339 AGCD01078325;GBBH01098166;XM_005415109 XP_005415166 MODEL 8942296 protein-coding Ranbp3l RAN binding protein 3 like ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN mesenchymal cell differentiation involved in bone development (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of myoblast differentiation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955426 21054463 21106290 - 102011888 AGCD01026578;AGCD01026579;AGCD01026580;GBCQ01004472;XM_013515011;XM_013515013;XM_013515014;XM_013515015 XP_013370465;XP_013370467;XP_013370468;XP_013370469 MODEL 8896681 protein-coding Dct dopachrome tautomerase ENCODES a protein that exhibits dopachrome isomerase activity (ortholog); INVOLVED IN cell development (ortholog); developmental pigmentation (ortholog); eye pigmentation (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH age related macular degeneration 7 (ortholog); Breast Cancer, Familial (ortholog); congenital nystagmus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); melanosome (ortholog) NW_004955404 15359402 15395556 + 102020410 AGCD01003541;AGCD01003542;AGCD01003543;XM_005374234 XP_005374291 MODEL 39132331 rrna 5S_rRNA 5S ribosomal RNA 10178340 pseudo LOC106148560 60S ribosomal protein L23a pseudogene NW_004955423 8002059 8002568 - 106148560 AGCD01023618 MODEL 8917411 protein-coding Sack1e scaffolding CK1 anchoring protein E ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955559 1933345 1942707 + 102009231 AGCD01073682;GBBH01186442;XM_005412949;XM_013509066 XP_005413006;XP_013364520 MODEL 8805802 protein-coding Timp1 TIMP metallopeptidase inhibitor 1 ENCODES a protein that exhibits cytokine activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); peptidase inhibitor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to acetaldehyde (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); adult respiratory distress syndrome (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955516 507113 511360 - 102013747 AGCD01067385;GBCQ01096551;XM_005408935;XM_005408936;XM_013506915;XM_013506916 XP_005408992;XP_005408993;XP_013362369;XP_013362370 MODEL 9015553 protein-coding Slc20a2 solute carrier family 20 member 2 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); virus receptor activity (ortholog); INVOLVED IN positive regulation of bone mineralization (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH anxiety disorder (ortholog); aphasia (ortholog); Back Pain (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955536 392341 496616 + 102006389 AGCD01070726;AGCD01070727;AGCD01070728;GBCQ01041012;GBDK01002048;XM_005410504 XP_005410561 MODEL 8700322 protein-coding Foxh1 forkhead box H1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); co-SMAD binding (ortholog); DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); aorta morphogenesis (ortholog); axial mesoderm development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH agnathia-otocephaly complex (ortholog); Conotruncal Cardiac Defects (ortholog); esophageal cancer (ortholog); FOUND IN activin responsive factor complex (ortholog); chromatin (ortholog); nucleus (ortholog) NW_004955454 3094015 3096060 - 102007189 AGCD01045051;GBDF01073904;XM_005395891 XP_005395948 MODEL 9014637 protein-coding Efcc1 EF-hand and coiled-coil domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955450 10494407 10523125 - 102009000 AGCD01042622;AGCD01042623;AGCD01042624;GBBH01206079;GBCE01123547;XM_013518907 XP_013374361 MODEL 8909017 pseudo LOC102012961 reactive oxygen species modulator 1 pseudogene NW_004955479 10848845 10849614 + 102012961 AGCD01056562 MODEL 8984416 protein-coding LOC102006285 vegetative cell wall protein gp1-like NW_004955546 1258104 1261505 - 102006285 AGCD01072044;GBDF01260251;XM_005411765;XM_005411766 XP_005411822;XP_005411823 MODEL 8850790 protein-coding LOC102012566 fatty acid desaturase 2-like protein FADS2P1 NW_004955511 1986298 2020040 + 102012566 AGCD01066386;AGCD01066387;GBCE01044968;XM_005407981 XP_005408038 MODEL 8803489 protein-coding LOC102007803 liver carboxylesterase 1-like NW_004955433 13305854 13329280 - 102007803 AGCD01031684;GBBH01002391;XM_005388326;XM_005388327 XP_005388383;XP_005388384 MODEL 8714430 protein-coding LOC102029843 C-type lectin domain family 4 member A-like NW_004955413 6845798 6858340 + 102029843 AGCD01013780;AGCD01013781;GBDK01343126;XM_005378918;XM_005378919 XP_005378975;XP_005378976 MODEL 39133803 misc_rna 7SK 7SK RNA 8775346 protein-coding LOC102018725 somatotropin-like NW_004955478 7920783 7923119 + 102018725 AGCD01055998;GBDJ01024839;XM_005402180 XP_005402237 MODEL 9000649 ncrna LOC102003774 uncharacterized LOC102003774 NW_004955422 13750163 13762795 - 102003774 AGCD01022838;GBCB01073765;XR_001233882;XR_001233883;XR_260871;XR_260872 MODEL 626189209 snorna SNORA51 Small nucleolar RNA SNORA51 9064075 protein-coding LOC102024127 secretory carrier-associated membrane protein 4 NW_004955495 6123148 6142488 - 102024127 AGCD01062051;AGCD01062052;GBCB01076724;XM_005405943;XM_013505268;XM_013505269;XM_013505270;XM_013505271;XM_013505272 XP_005406000;XP_013360722;XP_013360723;XP_013360724;XP_013360725;XP_013360726 MODEL 8978403 protein-coding LOC102010497 chromosome unknown open reading frame, human C16orf54 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955493 7204452 7207168 + 102010497 AGCD01061164;GBCQ01165127;XM_005405245;XM_005405246;XR_264093 XP_005405302;XP_005405303 MODEL 39133455 snorna SNORD58 Small nucleolar RNA SNORD58 8747515 protein-coding Det1 DET1 partner of COP1 E3 ubiquitin ligase ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955416 16393199 16408144 + 102008098 AGCD01017354;AGCD01017355;GBCB01056645;XM_005381574;XM_005381575;XM_013512684;XM_013512685 XP_005381631;XP_005381632;XP_013368138;XP_013368139 MODEL 8966209 protein-coding Calm2 calmodulin 2 ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); cannabis abuse (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog) NW_004955441 13973147 13988665 - 102017710 AGCD01037166;AGCD01037167;AGCD01037168;GBBH01002477;GBDF01001010;XM_005391051 XP_005391108 MODEL 8806374 protein-coding Chrm1 cholinergic receptor muscarinic 1 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN entrainment of circadian clock (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); neuromuscular synaptic transmission (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH asthma (ortholog); brain ischemia (ortholog); epilepsy (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); cholinergic synapse (ortholog) NW_004955599 349744 356714 + 102004442 AGCD01076640;GBDF01252230;GBDI01253861;XM_013510063 XP_013365517 MODEL 39131326 protein-coding PPM1N protein phosphatase, Mg2+/Mn2+ dependent 1N (putative) 9001436 protein-coding LOC102005212 regulator of G-protein signaling 12-like NW_004957078 697 1275 - 102005212 AGCD01080474;GBCE01118568;GBCE01118569;XM_005415222 XP_005415279 MODEL 8711659 protein-coding Exoc6b exocyst complex component 6B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955424 12777638 13308358 + 102021892 AGCD01024619;AGCD01024620;AGCD01024621;AGCD01024622;AGCD01024623;AGCD01024624;AGCD01024625;AGCD01024626;AGCD01024627;AGCD01024628;AGCD01024629;AGCD01024630;GBDF01252038;XM_005385581;XM_005385582;XM_005385583;XM_013514675;XM_013514676;XM_013514677 XP_005385638;XP_005385639;XP_005385640;XP_013370129;XP_013370130;XP_013370131 MODEL 8858689 protein-coding Tafa1 TAFA chemokine like family member 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN neuroblast differentiation (ortholog); regulation of neuroblast proliferation (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955421 19249435 19734903 - 102014679 AGCD01022070;AGCD01022071;AGCD01022072;AGCD01022073;AGCD01022074;AGCD01022075;AGCD01022076;AGCD01022077;AGCD01022078;GBDK01272788;XM_005383817;XM_005383818 XP_005383874;XP_005383875 MODEL 8728764 pseudo LOC102006671 nuclear FMR1 interacting protein 2-like NW_004955491 8637891 8639987 - 102006671 AGCD01060619 MODEL 8782076 ncrna LOC102011289 uncharacterized LOC102011289 NW_004955411 10258447 10278073 - 102011289 AGCD01011777;GBDF01225406;XR_001232804 MODEL 39132716 snrna U4 U4 spliceosomal RNA 39131697 rrna 5S_rRNA 5S ribosomal RNA 8738375 protein-coding Arl5a ARF like GTPase 5A INVOLVED IN protein localization to Golgi membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955440 17329450 17341836 - 102005845 AGCD01036564;GBCC01008227;XM_005390808 XP_005390865 MODEL 8939595 protein-coding Lrrc75b leucine rich repeat containing 75B NW_004955455 8068573 8074399 - 102015284 AGCD01045872;GBBH01208958;GBCE01155527;XM_013520451 XP_013375905 MODEL 8750554 pseudo LOC102012567 transcription initiation factor TFIID subunit 2 pseudogene NW_004955511 981095 984836 - 102012567 AGCD01066350 MODEL 8947861 protein-coding Xkr6 XK related 6 ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 52410318 52636952 - 102025203 AGCD01003003;AGCD01003004;AGCD01003005;AGCD01003006;AGCD01003007;AGCD01003008;AGCD01003009;AGCD01003010;AGCD01003011;GBDJ01373326;XM_005373810 XP_005373867 MODEL 10087470 protein-coding LOC106147472 putative DNA helicase ino80 NW_004955566 1378986 1382229 - 106147472 AGCD01074358;XM_013509213 XP_013364667 MODEL 8861832 protein-coding Rgs19 regulator of G protein signaling 19 ENCODES a protein that exhibits actin binding (ortholog); G-protein alpha-subunit binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); chemical synaptic transmission (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN brush border (ortholog); cell junction (ortholog); clathrin-coated vesicle (ortholog) NW_004955528 183067 185703 + 102022632 AGCD01069514;GBCE01116836;GBDJ01317429;XM_013507518 XP_013362972 MODEL 39134495 misc_rna 7SK 7SK RNA 8946118 protein-coding Ccdc93 CCC complex scaffolding subunit CCDC93 INVOLVED IN aorta development (ortholog); artery development (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955459 11668605 11748327 + 102026609 AGCD01048234;AGCD01048235;GBDF01082760;XM_005397689;XM_005397691 XP_005397746;XP_005397748 MODEL 8990513 protein-coding Ctu2 cytosolic thiouridylase subunit 2 ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955541 2610021 2618197 + 102026798 AGCD01071418;AGCD01071419;GBBH01185371;XM_013507940 XP_013363394 MODEL 8898897 pseudo LOC102003422 40S ribosomal protein S6 pseudogene NW_004955411 36312248 36313022 - 102003422 AGCD01012470 MODEL 9010106 protein-coding Timp2 TIMP metallopeptidase inhibitor 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); integrin binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of mitotic cell cycle (ortholog); negative regulation of proteolysis (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); Brain Injuries (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955506 3769113 3812896 + 102029096 AGCD01065319;GBCE01002810;XM_005407364 XP_005407421 MODEL 8820691 protein-coding Poli DNA polymerase iota ENCODES a protein that exhibits DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN cellular response to UV-C (ortholog); translesion synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955402 38866528 38891235 + 102024741 AGCD01000971;GBDI01226624;XM_013510810;XM_013510820 XP_013366264;XP_013366274 MODEL 9060382 protein-coding LOC102025227 cytochrome c oxidase subunit 6B1 INVOLVED IN substantia nigra development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955468 2884958 2891952 - 102025227 AGCD01051842;GBDI01012604;XM_005399978 XP_005400035 MODEL 9023850 protein-coding Tslig3a tRNA splicing ligase complex subunit 3A ENCODES a protein that exhibits protein methyltransferase activity (ortholog); INVOLVED IN lysosome localization (ortholog); positive regulation of ruffle assembly (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955441 1799453 1814096 - 102027117 AGCD01036757;AGCD01036758;GBDJ01045504;XM_005390857 XP_005390914 MODEL 9009403 protein-coding Efemp1 EGF-like fibulin extracellular matrix protein 1 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955424 27181717 27240067 + 102006046 AGCD01025105;GBCE01000010;XM_005385769 XP_005385826 MODEL 9060195 protein-coding Foxi1 forkhead box I1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN inner ear morphogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 4 (ortholog); cervical cancer (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleolus (ortholog) NW_004955408 23074876 23078766 + 102015288 AGCD01008583;GBCQ01151064;XM_005376311 XP_005376368 MODEL 9032728 protein-coding Elof1 elongation factor 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN transcription-coupled nucleotide-excision repair (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955495 2403566 2406182 - 102026651 AGCD01061770;GBDF01005723;XM_005405674;XM_013505116;XM_013505117 XP_005405731;XP_013360570;XP_013360571 MODEL 9011515 protein-coding Siglec1 sialic acid binding Ig like lectin 1 ENCODES a protein that exhibits virion binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); clathrin-dependent endocytosis of virus by host cell (ortholog); negative regulation of phagocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN early endosome (ortholog); endocytic vesicle (ortholog); late endosome (ortholog) NW_004955415 14539284 14560614 - 102028630 AGCD01016300;GBBH01214194;XM_005380797;XR_001233251 XP_005380854 MODEL 8838914 protein-coding LOC102009342 translation initiation factor IF-2-like NW_004955404 10719070 10720405 + 102009342 AGCD01003391;GBDF01220559;XM_005374052 XP_005374109 MODEL 39133470 snrna U4 U4 spliceosomal RNA 8891422 ncrna LOC102011290 uncharacterized LOC102011290 NW_004955464 5744512 5747225 + 102011290 AGCD01050012;AGCD01050013;GBDF01041677;XR_263200 MODEL 9061898 protein-coding LOC102025934 olfactory receptor 9Q1-like NW_004955511 2971725 2972660 + 102025934 AGCD01066437;XM_005408022 XP_005408079 MODEL 8795588 protein-coding Dctd dCMP deaminase ENCODES a protein that exhibits 5-hydroxymethyl-dUMP N-hydrolase activity (ortholog); identical protein binding (ortholog); INVOLVED IN nucleoside salvage (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; gemcitabine pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955403 25825366 25849511 + 102011934 AGCD01002295;GBCB01003249;XM_005373508 XP_005373565 MODEL 8750168 protein-coding Rab11fip2 RAB11 family interacting protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN establishment of cell polarity (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); phagocytosis (ortholog); PARTICIPATES IN vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN endosome (ortholog); phagocytic cup (ortholog) NW_004955431 22637605 22674107 - 102030657 AGCD01030516;GBBH01043971;GBCB01073562;XM_005387876 XP_005387933 MODEL 8962343 protein-coding Coq9 coenzyme Q9 ENCODES a protein that exhibits enzyme activator activity (ortholog); isoprenoid binding (ortholog); lipid binding (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); coenzyme Q10 deficiency disease (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); ubiquinone biosynthesis complex (ortholog) NW_004955433 15081390 15094441 + 102026784 AGCD01031745;GBDF01054028;XM_005388389 XP_005388446 MODEL 8832126 pseudo LOC102005565 histone-binding protein RBBP4-B-like NW_004955407 19026615 19027887 - 102005565 AGCD01007294 MODEL 39131560 protein-coding XKR7 XK related 7 730468961 snorna SNORA52 Small nucleolar RNA SNORA52 10267287 ncrna LOC106148561 uncharacterized LOC106148561 NW_004955403 53062133 53067292 - 106148561 AGCD01003031;GBDJ01060271;XR_001234127 MODEL 8726626 protein-coding Ptn pleiotrophin ENCODES a protein that exhibits carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to D-galactosamine (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH adrenal carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Body Weight (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955494 5580264 5681848 + 102006927 AGCD01061522;AGCD01061523;GBCE01001843;XM_013505031;XM_013505032 XP_013360485;XP_013360486 MODEL 8869995 protein-coding Deup1 deuterosome assembly protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN deuterosome (ortholog) NW_004955414 1062968 1126698 - 102025452 AGCD01014757;GBBH01011302;GBCE01162883;XM_005379707;XM_013512047;XM_013512048;XM_013512049;XM_013512050;XM_013512051;XM_013512052 XP_005379764;XP_013367501;XP_013367502;XP_013367503;XP_013367504;XP_013367505;XP_013367506 MODEL 8880640 ncrna LOC102012964 uncharacterized LOC102012964 NW_004955418 2720066 2727457 + 102012964 AGCD01018774;GBDF01250695;XR_001233484;XR_001233485 MODEL 8972200 protein-coding Chrm2 cholinergic receptor muscarinic 2 ENCODES a protein that exhibits arrestin family protein binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; ASSOCIATED WITH asthma (ortholog); bipolar disorder (ortholog); Bradycardia (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); cholinergic synapse (ortholog) NW_004955494 5845581 5975614 - 102007442 AGCD01061526;AGCD01061527;GBDF01014366;XM_005405469 XP_005405526 MODEL 8980668 pseudo LOC102006293 protein kinase C iota type pseudogene NW_004955443 17422253 17426023 + 102006293 AGCD01038579 MODEL 8732681 protein-coding Exoc7 exocyst complex component 7 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of mitotic cytokinetic process (ortholog); protein localization to ciliary membrane (ortholog); protein transmembrane transport (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centriolar satellite (ortholog); ciliary basal body (ortholog) NW_004955506 6150297 6166920 + 102030652 AGCD01065402;GBDF01049891;XM_005407446;XM_005407447;XM_005407448;XM_005407449;XM_005407450;XM_005407451;XM_005407452;XM_005407453 XP_005407503;XP_005407504;XP_005407505;XP_005407506;XP_005407507;XP_005407508;XP_005407509;XP_005407510 MODEL 8863922 protein-coding Dusp26 dual specificity phosphatase 26 ENCODES a protein that exhibits p53 binding (ortholog); phosphoprotein phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell adhesion (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) NW_004955463 9712943 9718959 - 102008926 AGCD01049796;GBCB01005948;GBCQ01009430;XM_005398407 XP_005398464 MODEL 8728818 pseudo LOC102007808 T-complex protein 1 subunit delta pseudogene NW_004955434 3956987 3963609 + 102007808 AGCD01032151;AGCD01032152;XR_261648 MODEL 9066139 protein-coding Ranbp6 RAN binding protein 6 ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog) NW_004955434 9995734 9999194 - 102005836 AGCD01032317;GBBH01071300;XM_005388668;XM_005388670 XP_005388725;XP_005388727 MODEL 39132335 rrna 5S_rRNA 5S ribosomal RNA 39133804 misc_rna 7SK 7SK RNA 8928157 protein-coding Arl5b ARF like GTPase 5B INVOLVED IN protein localization to Golgi membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955429 9564685 9589997 - 102021996 AGCD01028650;AGCD01028651;GBDF01159964;XM_005386939;XM_005386940;XM_013515509 XP_005386996;XP_005386997;XP_013370963 MODEL 8795351 protein-coding LOC102003778 cationic trypsin-3-like NW_004955494 1217574 1223680 + 102003778 AGCD01061392;XM_013504918 XP_013360372 MODEL 9030056 protein-coding LOC102018726 uncharacterized LOC102018726 NW_004955478 10841511 10868929 - 102018726 AGCD01056152;GBDF01195145;XM_005402275;XM_013503217;XR_001230851;XR_001230852;XR_001230853 XP_005402332;XP_013358671 MODEL 8998755 protein-coding Slc22a11 solute carrier family 22 member 11 ENCODES a protein that exhibits prostaglandin transmembrane transporter activity (ortholog); secondary active transmembrane transporter activity (ortholog); solute:inorganic anion antiporter activity (ortholog); INVOLVED IN prostaglandin transport (ortholog); transmembrane transport (ortholog); urate metabolic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); external side of plasma membrane (ortholog) NW_004955422 20582736 20595872 - 102008741 AGCD01023084;GBCQ01008134;XM_005384592;XM_013513819 XP_005384649;XP_013369273 MODEL 39133452 snorna SNORD58 Small nucleolar RNA SNORD58 8970787 protein-coding LOC102010503 lariat debranching enzyme-like NW_004955501 822211 823819 + 102010503 AGCD01064040;GBDF01305393;XM_005406749 XP_005406806 MODEL 8857471 protein-coding Ints14 integrator complex subunit 14 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955450 9892476 9925231 + 102005868 AGCD01042600;GBDK01320478;XM_005393717;XM_005393718 XP_005393774;XP_005393775 MODEL 9029933 protein-coding Ppm1n protein phosphatase, Mg2+/Mn2+ dependent 1N (putative) ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955574 11728 16786 + 102012702 AGCD01075077;GBDF01178017;XM_013509550;XM_013509551;XM_013509553;XM_013509554;XM_013509555 XP_013365004;XP_013365005;XP_013365007;XP_013365008;XP_013365009 MODEL 39134496 misc_rna 7SK 7SK RNA 8974371 ncrna LOC102022044 uncharacterized LOC102022044 NW_004955406 5152131 5165702 - 102022044 AGCD01005714;GBDF01220762;XR_001236233 MODEL 8742361 protein-coding Rgs2 regulator of G protein signaling 2 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); beta-tubulin binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); maternal process involved in female pregnancy (ortholog); negative regulation of cardiac muscle hypertrophy (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955406 30261757 30265389 + 102018685 AGCD01006363;GBBH01140341;XM_005375101 XP_005375158 MODEL 39131698 rrna 5S_rRNA 5S ribosomal RNA 9051697 pseudo LOC102029845 rRNA-processing protein FCF1 homolog pseudogene NW_004955468 5208628 5209202 - 102029845 AGCD01051959 MODEL 8887793 protein-coding Timp3 TIMP metallopeptidase inhibitor 3 INVOLVED IN cellular response to hypoxia (ortholog); cellular response to interleukin-6 (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH asthma (ortholog); bladder disease (ortholog); breast cancer (ortholog); FOUND IN basement membrane (ortholog) NW_004955405 41613976 41655813 + 102003311 AGCD01005557;GBCE01004412;XM_005374652 XP_005374709 MODEL 8962038 pseudo LOC102012571 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955434 15042346 15042821 - 102012571 AGCD01032459 MODEL 9042750 protein-coding Polk DNA polymerase kappa ENCODES a protein that exhibits DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA biosynthetic process (ortholog); DNA damage response (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955425 25164749 25228064 - 102025704 AGCD01025910;AGCD01025911;GBDK01191546;XM_005386051;XM_013514789;XM_013514790;XM_013514791;XM_013514792;XM_013514793;XM_013514794 XP_005386108;XP_013370243;XP_013370244;XP_013370245;XP_013370246;XP_013370247;XP_013370248 MODEL 9013676 protein-coding Efemp2 EGF-like fibulin extracellular matrix protein 2 ENCODES a protein that exhibits heparin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aorta development (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); artery development (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); aortic disease (ortholog); aortic dissection (ortholog); FOUND IN basement membrane (ortholog); elastic fiber (ortholog); non-collagenous component of basement membrane (ortholog) NW_004955422 19463090 19470605 + 102026333 AGCD01023010;AGCD01023011;GBBH01165207;XM_005384452;XM_005384453;XM_005384454;XM_013513845 XP_005384509;XP_005384510;XP_005384511;XP_013369299 MODEL 8810476 protein-coding Lrrc8a leucine rich repeat containing 8 VRAC subunit A ENCODES a protein that exhibits cyclic-GMP-AMP transmembrane transporter activity (ortholog); identical protein binding (ortholog); monoatomic anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cell volume homeostasis (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 5 (ortholog); FOUND IN cell surface (ortholog); lysosomal membrane (ortholog); membrane (ortholog) NW_004955570 1270710 1295658 + 102010956 AGCD01074807;GBDK01143504;XM_005413593;XM_005413595;XM_005413596;XM_005413597;XM_005413598;XM_013509413 XP_005413650;XP_005413652;XP_005413653;XP_005413654;XP_005413655;XP_013364867 MODEL 9024008 pseudo LOC102009346 ribosome biogenesis protein BRX1 homolog pseudogene NW_004955453 6480308 6481349 + 102009346 AGCD01044720 MODEL 9010709 protein-coding LOC102025936 olfactory receptor 4C11-like NW_004955511 245457 275350 + 102025936 AGCD01066325;AGCD01066326;GBCE01094201;XM_013506351 XP_013361805 MODEL 8713044 protein-coding Bcas4 breast carcinoma amplified sequence 4 ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955445 7542545 7603896 - 102026052 AGCD01039544;AGCD01039545;AGCD01039546;GBCE01013075;GBDI01222160;XM_013518344;XM_013518345;XM_013518346 XP_013373798;XP_013373799;XP_013373800 MODEL 9037413 pseudo LOC102003782 solute carrier organic anion transporter family member 4C1 pseudogene NW_004955496 8201732 8203098 - 102003782 AGCD01062392 MODEL 10380307 ncrna LOC106147473 uncharacterized LOC106147473 NW_004955566 1168632 1171220 + 106147473 AGCD01074356;XR_001232394 MODEL 9057001 protein-coding LOC102011291 cytochrome P450 4A11-like NW_004955464 11487951 11500616 - 102011291 AGCD01050155;GBBH01214209;XM_005398645;XM_005398647 XP_005398702;XP_005398704 MODEL 39131533 protein-coding TAFA2 TAFA chemokine like family member 2 730469548 snorna SNORA52 Small nucleolar RNA SNORA52 8830038 protein-coding Ctxn1 cortexin 1 NW_004955563 1343212 1344056 + 102018444 AGCD01074142;GBBH01001939;GBCB01089641;XM_005413139 XP_005413196 MODEL 8711803 protein-coding Corin corin, serine peptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN female pregnancy (ortholog); peptide hormone processing (ortholog); regulation of blood pressure (ortholog); PARTICIPATES IN atrial natriuretic peptide signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiomegaly (ortholog); colorectal cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955443 721655 970600 + 102027350 AGCD01038119;AGCD01038120;AGCD01038121;AGCD01038122;AGCD01038123;AGCD01038124;AGCD01038125;AGCD01038126;AGCD01038127;GBDJ01377729;XM_005391890;XM_013518121;XM_013518122 XP_005391947;XP_013373575;XP_013373576 MODEL 9000172 protein-coding Ccdc97 coiled-coil domain containing 97 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955555 255906 269432 + 102013973 AGCD01073024;GBDJ01315732;XM_005412337;XM_013508690;XM_013508691 XP_005412394;XP_013364144;XP_013364145 MODEL 8819299 pseudo LOC102003423 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955464 11721827 11722678 - 102003423 AGCD01050161 MODEL 8879374 protein-coding LOC102006674 ATP-binding cassette sub-family A member 3-like NW_004955493 488799 638781 + 102006674 AGCD01060854;AGCD01060855;AGCD01060856;AGCD01060857;AGCD01060858;GBDF01290732;XM_005405051;XM_005405052;XM_013504904;XM_013504905;XM_013504906;XM_013504907;XM_013504908 XP_005405108;XP_005405109;XP_013360358;XP_013360359;XP_013360360;XP_013360361;XP_013360362 MODEL 8752979 protein-coding LOC102012965 uncharacterized LOC102012965 NW_004955481 9182564 9207329 + 102012965 AGCD01057096;AGCD01057097;GBDF01015936;XM_005402931 XP_005402988 MODEL 8968138 protein-coding Tslig3b tRNA splicing ligase complex subunit 3B ENCODES a protein that exhibits identical protein binding (ortholog); protein methyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 5457232 5486744 + 102008845 AGCD01016912;AGCD01016913;GBBH01025779;GBDF01193034;XM_013512677 XP_013368131 MODEL 8773171 protein-coding Foxi2 forkhead box I2 NW_004955477 5548676 5552882 + 102014244 AGCD01055598;GBBH01012085;XM_005402011 XP_005402068 MODEL 8882298 ncrna LOC102024130 uncharacterized LOC102024130 NW_004955424 13576197 13580849 - 102024130 AGCD01024636;GBDF01251114;XR_261063 MODEL 8894089 protein-coding Siglec15 sialic acid binding Ig like lectin 15 INVOLVED IN regulation of actin cytoskeleton organization (ortholog); regulation of bone resorption (ortholog); regulation of osteoclast development (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955402 31403765 31418954 + 102025196 AGCD01000788;GBCE01055940;XM_013510392 XP_013365846 MODEL 9039046 pseudo LOC102012573 40S ribosomal protein S11-like NW_004955526 2916961 2917447 + 102012573 AGCD01069324 MODEL 9050103 protein-coding Calm3 calmodulin 3 ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); familial hypertrophic cardiomyopathy (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog) NW_004955574 672441 680924 + 102028035 AGCD01075122;GBCE01060621;GBDK01014277;XM_005413836 XP_005413893 MODEL 8931447 protein-coding LOC102005213 homeobox protein Hox-B6 NW_004955403 20538174 20539079 - 102005213 AGCD01002162;GBCQ01033155;GBDI01385068;XM_013512796 XP_013368250 MODEL 8948582 pseudo LOC102005569 UDP-N-acetylhexosamine pyrophosphorylase pseudogene NW_004955458 8136442 8138154 - 102005569 AGCD01047600 MODEL 8938081 protein-coding Slc22a12 solute carrier family 22 member 12 ENCODES a protein that exhibits PDZ domain binding (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); renal urate salt excretion (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); clear cell renal cell carcinoma (ortholog); Congenital Abnormalities (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); membrane (ortholog) NW_004955422 20555458 20561818 - 102007566 AGCD01023083;GBCQ01008135;XM_005384586;XM_005384588;XM_005384590 XP_005384643;XP_005384645;XP_005384647 MODEL 8776800 protein-coding Dctn1 dynactin subunit 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN axonal transport (ortholog); centriole-centriole cohesion (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN mitochondria transport pathway; N-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cell cortex (ortholog); cell leading edge (ortholog); centriolar subdistal appendage (ortholog) NW_004955424 11362240 11413140 + 102028987 AGCD01024564;AGCD01024565;AGCD01024566;GBCQ01014965;XM_005385510;XM_005385512;XM_005385513;XM_005385514;XM_005385515;XM_005385516;XM_013514618;XM_013514619;XM_013514620 XP_005385567;XP_005385569;XP_005385570;XP_005385571;XP_005385572;XP_005385573;XP_013370072;XP_013370073;XP_013370074 MODEL 9013157 protein-coding Dexi Dexi homolog NW_004955442 7585954 7599413 + 102005514 AGCD01037625;GBDF01049155;XM_005391177;XM_005391178;XM_013518003 XP_005391234;XP_005391235;XP_013373457 MODEL 8818994 pseudo LOC102022047 centromere protein Q-like NW_004955456 231873 232590 - 102022047 AGCD01046201 MODEL 9055588 protein-coding Ppme1 protein phosphatase methylesterase 1 ENCODES a protein that exhibits lncRNA binding (ortholog); protein kinase binding (ortholog); protein methylesterase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955414 17384695 17444269 - 102009272 AGCD01015241;GBDK01143985;XM_005379925 XP_005379982 MODEL 8742749 protein-coding LOC102006296 zinc finger protein 709-like NW_004955569 1353747 1371972 - 102006296 AGCD01074650;AGCD01074651;GBCE01006118;XM_005413500 XP_005413557 MODEL 8888498 protein-coding Elovl1 ELOVL fatty acid elongase 1 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ICHTHYOTIC KERATODERMA, SPASTICITY, HYPOMYELINATION, AND DYSMORPHIC FACIAL FEATURES (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955537 2945509 2950146 - 102026566 AGCD01070940;GBCE01055429;XM_005410653;XM_013507748 XP_005410710;XP_013363202 MODEL 8817817 pseudo LOC102003428 40S ribosomal protein S2 pseudogene NW_004955467 3259017 3259823 - 102003428 AGCD01051332 MODEL 8859232 protein-coding Exoc8 exocyst complex component 8 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endosome organization (ortholog); exocytosis (ortholog); extracellular matrix disassembly (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, SEIZURES, AND BRAIN ATROPHY (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cell leading edge (ortholog); ciliary base (ortholog) NW_004955492 7476866 7481186 + 102008633 AGCD01060798;GBCE01166882;XM_005404976 XP_005405033 MODEL 39132337 rrna 5S_rRNA 5S ribosomal RNA 8965048 protein-coding LOC102029850 olfactory receptor 51B4 NW_004955414 21230082 21231017 - 102029850 AGCD01015410;XM_005380078 XP_005380135 MODEL 8793843 protein-coding LOC102007810 glutathione S-transferase Mu 2 NW_004955435 13099385 13175462 + 102007810 AGCD01033184;AGCD01033185;AGCD01033186;AGCD01033187;AGCD01033188;AGCD01033189;AGCD01033190;AGCD01033191;AGCD01033192;AGCD01033193;GBCE01002116;GBDI01010302;XM_005388888 XP_005388945 MODEL 39133451 snorna SNORD58 Small nucleolar RNA SNORD58 8846606 protein-coding LOC102018733 uncharacterized LOC102018733 NW_004955420 25222759 25231032 - 102018733 AGCD01021347;GBBH01116817;XM_005383418;XR_001233696;XR_260751 XP_005383475 MODEL 8960616 protein-coding Arl6 ARF like GTPase 6 INVOLVED IN brain development (ortholog); cilium assembly (ortholog); fat cell differentiation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN ciliary tip (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955407 360898 387563 - 102012059 AGCD01006738;AGCD01006739;GBCQ01033877;XM_013503500;XM_013503509;XM_013503515 XP_013358954;XP_013358963;XP_013358969 MODEL 8989057 protein-coding Xkr7 XK related 7 FOUND IN plasma membrane (ortholog) NW_004955422 29015901 29024414 - 102006042 AGCD01023377;GBDF01135049;XM_013513843 XP_013369297 MODEL 8774859 protein-coding Rab11fip3 RAB11 family interacting protein 3 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane protein transport (ortholog); negative regulation of adiponectin secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); endocytic vesicle membrane (ortholog) NW_004955442 16678136 16760663 - 102027239 AGCD01037905;AGCD01037906;AGCD01037907;AGCD01037908;AGCD01037909;GBBH01228926;GBDJ01230394;XM_013517818;XM_013517819 XP_013373272;XP_013373273 MODEL 8751917 protein-coding LOC102024131 phospholipid-transporting ATPase IB NW_004955497 4990555 5444957 + 102024131 AGCD01062590;AGCD01062591;AGCD01062592;AGCD01062593;GBCE01063645;GBDF01004666;XM_005406335;XM_013505503;XM_013505504;XM_013505505 XP_005406392;XP_013360957;XP_013360958;XP_013360959 MODEL 8721581 protein-coding Ptov1 PTOV1 extended AT-hook containing adaptor protein ASSOCIATED WITH cervical cancer (ortholog); Disease Progression (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955559 1070856 1079052 - 102029454 AGCD01073628;AGCD01073629;GBDK01007823;GBDK01196056;XM_013508969 XP_013364423 MODEL 8753417 protein-coding LOC102009347 translation initiation factor IF-2-like NW_004955406 23881198 23887173 - 102009347 AGCD01006186;GBCQ01162563;XM_005375074;XM_013521722 XP_005375131;XP_013377176 MODEL 8749979 pseudo LOC102025229 small EDRK-rich factor 1 pseudogene NW_004955468 10128117 10128305 - 102025229 AGCD01052067;XM_005400310 MODEL 39134497 misc_rna 7SK 7SK RNA 8755646 protein-coding Chrm3 cholinergic receptor muscarinic 3 ENCODES a protein that exhibits acetylcholine binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); G protein-coupled acetylcholine receptor binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; ASSOCIATED WITH Ascites (ortholog); asthma (ortholog); bladder disease (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); basal plasma membrane (ortholog) NW_004955492 958347 1429832 - 102015019 AGCD01060652;AGCD01060653;AGCD01060654;AGCD01060655;AGCD01060656;AGCD01060657;AGCD01060658;AGCD01060659;GBDK01098808;XM_005404924;XM_013504730;XM_013504731;XM_013504732;XM_013504733;XM_013504734;XR_001231254 XP_005404981;XP_013360184;XP_013360185;XP_013360186;XP_013360187;XP_013360188 MODEL 10103902 ncrna LOC106148562 uncharacterized LOC106148562 NW_004955423 9233694 9249226 - 106148562 AGCD01023656;GBDF01043853;XR_001234128 MODEL 41410897 snorna SNORA52 Small nucleolar RNA SNORA52 9041603 protein-coding Sack1f scaffolding CK1 anchoring protein F ASSOCIATED WITH oligospermia (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 25775107 25807592 + 102006999 AGCD01014414;GBDF01112276;XM_005379307 XP_005379364 MODEL 39131699 rrna 5S_rRNA 5S ribosomal RNA 8866233 protein-coding Rgs20 regulator of G protein signaling 20 INVOLVED IN response to amphetamine (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); trans-Golgi network (ortholog) NW_004955454 13271409 13305730 + 102005338 AGCD01045432;GBDK01335709;XM_005396066 XP_005396123 MODEL 8955933 protein-coding Ccdc9b coiled-coil domain containing 9B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955416 7258446 7268342 - 102018827 AGCD01016971;GBDK01127159;XM_013512619 XP_013368073 MODEL 8713186 ncrna LOC102006677 uncharacterized LOC102006677 NW_004955422 22593229 22599979 + 102006677 AGCD01023163;GBDF01074983;XR_260905 MODEL 39133805 misc_rna 7SK 7SK RNA 8724078 protein-coding Dusp28 dual specificity phosphatase 28 ENCODES a protein that exhibits phosphatase activity (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog) NW_004955542 909239 911139 - 102018333 AGCD01071484;AGCD01071485;GBBH01102815;XM_005411166 XP_005411223 MODEL 8890232 protein-coding Timp4 TIMP metallopeptidase inhibitor 4 INVOLVED IN Notch signaling pathway (ortholog); ovulation cycle (ortholog); response to cytokine (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Arteriovenous Fistula (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog); sarcomere (ortholog) NW_004955429 14689016 14693211 - 102017362 AGCD01028784;GBDI01354181;XM_005387015 XP_005387072 MODEL 8949683 protein-coding Poll DNA polymerase lambda ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955485 8691886 8700681 + 102025467 AGCD01058724;GBDJ01225502;XM_005403869;XM_005403870;XM_013504091 XP_005403926;XP_005403927;XP_013359545 MODEL 8946244 protein-coding Efhb EF-hand domain family member B ENCODES a protein that exhibits calcium ion sensor activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of store-operated calcium entry (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955430 11932753 11986985 - 102004190 AGCD01029468;AGCD01029469;AGCD01029470;AGCD01029471;AGCD01029472;GBDJ01405223;XM_005387460;XM_013515691 XP_005387517;XP_013371145 MODEL 9023669 protein-coding Ints15 integrator complex subunit 15 INVOLVED IN brain development (ortholog); eye development (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955460 13106906 13118531 - 102019147 AGCD01048671;GBDF01154363;XM_005397884;XM_013521245 XP_005397941;XP_013376699 MODEL 8797367 pseudo LOC102003430 olfactory receptor 10J5-like NW_004955468 11314436 11315226 - 102003430 AGCD01052125 MODEL 9023519 protein-coding LOC102010505 olfactory receptor 5A1 NW_004955511 3947526 3953543 + 102010505 AGCD01066484;XM_005408061 XP_005408118 MODEL 8704246 protein-coding Siglec5 sialic acid binding Ig like lectin 5 ENCODES a protein that exhibits monosaccharide binding (ortholog); sialic acid binding (ortholog); INVOLVED IN regulation of endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN lysosome (ortholog) NW_004955558 932981 945623 + 102005310 AGCD01073406;AGCD01073407;GBBH01003474;GBDF01009380;XM_013508882 XP_013364336 MODEL 39132342 rrna 5S_rRNA 5S ribosomal RNA 8859781 ncrna LOC102025939 uncharacterized LOC102025939 NW_004955435 1521893 1545539 - 102025939 AGCD01032748;GBCE01014488;XR_001234909;XR_001234910;XR_001234911;XR_001234912 MODEL 8741825 protein-coding Calml4 calmodulin like 4 ENCODES a protein that exhibits myosin head/neck binding (ortholog); INVOLVED IN brush border assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN microvillus (ortholog) NW_004955450 7886565 7894143 + 102022656 AGCD01042552;GBDI01021491;XM_005393681;XM_013518901;XM_013518902;XM_013518903;XM_013518904 XP_005393738;XP_013374355;XP_013374356;XP_013374357;XP_013374358 MODEL 8850638 ncrna LOC102007811 uncharacterized LOC102007811 NW_004955436 506358 507779 - 102007811 AGCD01033545;GBCB01129963;XR_261734 MODEL 8817638 protein-coding Bcat1 branched chain amino acid transaminase 1 ENCODES a protein that exhibits branched-chain-amino-acid:2-oxoglutarate transaminase activity (ortholog); identical protein binding (ortholog); L-isoleucine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); L-isoleucine catabolic process (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955413 19975395 20087656 - 102028072 AGCD01014204;AGCD01014205;AGCD01014206;AGCD01014207;AGCD01014208;GBDF01118828;XM_005379094;XM_013511614 XP_005379151;XP_013367068 MODEL 10201637 ncrna LOC106147474 uncharacterized LOC106147474 NW_004955566 1517647 1519621 - 106147474 AGCD01074364;GBBH01073221;XR_001232395 MODEL 8913280 pseudo LOC102005572 tRNA pseudouridine(38/39) synthase-like NW_004955409 17846564 17848790 + 102005572 AGCD01009800 MODEL 39133471 snrna U4 U4 spliceosomal RNA 8906443 protein-coding Ctxn2 cortexin 2 ASSOCIATED WITH hepatocellular carcinoma (ortholog); sarcoma (ortholog); thymoma (ortholog) NW_004955409 5685318 5695682 - 102013255 AGCD01009321;GBDF01260793;XM_005376706;XM_005376707 XP_005376763;XP_005376764 MODEL 8915530 protein-coding Slc22a13 solute carrier family 22 member 13 ENCODES a protein that exhibits nicotinate transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN negative regulation of fatty acid metabolic process (ortholog); nicotinate transport (ortholog); positive regulation of T cell mediated cytotoxicity directed against tumor cell target (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955421 5027568 5040000 - 102015731 AGCD01021710;GBCQ01007054;XM_005383735;XM_013513635 XP_005383792;XP_013369089 MODEL 39134498 misc_rna 7SK 7SK RNA 8824295 protein-coding Dffa DNA fragmentation factor subunit alpha ENCODES a protein that exhibits deoxyribonuclease inhibitor activity (ortholog); INVOLVED IN negative regulation of apoptotic DNA fragmentation (ortholog); negative regulation of execution phase of apoptosis (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955486 3273712 3274510 + 102020676 AGCD01059020;XM_013504141 XP_013359595 MODEL 8924457 protein-coding Dctn2 dynactin subunit 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); spectrin binding (ortholog); INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); melanosome transport (ortholog); mitotic metaphase chromosome alignment (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); dynactin complex (ortholog) NW_004955458 5247871 5264424 - 102005776 AGCD01047470;GBDF01009997;XM_005397395;XM_005397396;XM_005397397 XP_005397452;XP_005397453;XP_005397454 MODEL 8840868 protein-coding Foxi3 forkhead box I3 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN epidermal cell fate specification (ortholog); hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH Clouston syndrome (ortholog); Craniofacial Microsomia 2 (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) NW_004955424 356951 358221 + 102017037 AGCD01024174;GBDF01133221;XM_013514600 XP_013370054 MODEL 10339085 ncrna LOC106148563 uncharacterized LOC106148563 NW_004955424 19049546 19051638 + 106148563 AGCD01024803;GBCE01026993;XR_001234135;XR_001234136 MODEL 39131700 rrna 5S_rRNA 5S ribosomal RNA 8879327 pseudo LOC102003785 translocation protein SEC62-like NW_004955426 65589 86951 + 102003785 AGCD01025993 MODEL 8717128 ncrna LOC102005214 uncharacterized LOC102005214 NW_004955451 1877295 1878130 - 102005214 AGCD01042992;GBDF01085621;XR_001235999 MODEL 9060919 protein-coding Rgs21 regulator of G protein signaling 21 INVOLVED IN sensory perception of bitter taste (ortholog); sensory perception of sweet taste (ortholog); sensory perception of umami taste (ortholog) NW_004955406 29778745 29800009 + 102016886 AGCD01006341;AGCD01006342;XM_005375097 XP_005375154 MODEL 8824275 pseudo LOC102018737 dnaJ homolog subfamily A member 1-like NW_004955489 1322766 1323948 - 102018737 AGCD01059836 MODEL 8795035 protein-coding LOC102024133 melanoma-associated antigen 4-like NW_004955498 4509990 4510988 + 102024133 AGCD01063001;XM_005406484 XP_005406541 MODEL 8711734 pseudo LOC102025231 60S ribosomal protein L36 pseudogene NW_004955469 290871 292912 + 102025231 AGCD01052216 MODEL 9046916 protein-coding Coro1a coronin 1A ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); axon (ortholog) NW_004955493 6815148 6820295 - 102020927 AGCD01061141;GBBH01001010;GBBH01150340;XM_005405184 XP_005405241 MODEL 8747659 protein-coding LOC102012966 olfactory receptor 13G1 NW_004955418 30326157 30327080 - 102012966 AGCD01019513;XM_005382372 XP_005382429 MODEL 8897517 protein-coding Ptp4a1 protein tyrosine phosphatase 4A1 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); early endosome (ortholog) NW_004955502 322827 329226 - 102023377 AGCD01064234;GBDK01070331;XM_005406875 XP_005406932 MODEL 8936849 pseudo LOC102005573 peroxiredoxin-1 pseudogene NW_004955410 34010516 34011152 - 102005573 AGCD01011394 MODEL 8760621 protein-coding Elovl2 ELOVL fatty acid elongase 2 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); fatty acid elongase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); very long-chain fatty acid biosynthetic process (ortholog); ASSOCIATED WITH male infertility (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955465 3413923 3433558 + 102019043 AGCD01050378;GBDJ01127241;XM_005398829 XP_005398886 MODEL 8817913 pseudo LOC102006298 heat shock factor-binding protein 1 pseudogene NW_004955582 64495 67098 - 102006298 AGCD01075739;AGCD01075740 MODEL 9032234 protein-coding Chrm4 cholinergic receptor muscarinic 4 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH Catatonia (ortholog); congestive heart failure (ortholog); Tremor (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); glutamatergic synapse (ortholog) NW_004955422 1647663 1655363 + 102008737 AGCD01022467;GBDF01011379;XM_005384028;XM_005384029;XM_005384030;XR_001233927 XP_005384085;XP_005384086;XP_005384087 MODEL 8723145 pseudo LOC102029853 microspherule protein 1 pseudogene NW_004955414 16007175 16008531 - 102029853 AGCD01015194 MODEL 8781905 protein-coding Exog exo/endonuclease G ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); endonuclease activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Brugada syndrome (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955427 25394019 25426930 - 102004733 AGCD01027539;AGCD01027540;GBBH01172707;XM_005386588 XP_005386645 MODEL 8700011 protein-coding Dctn3 dynactin subunit 3 INVOLVED IN cytoskeleton-dependent cytokinesis (ortholog); dynein-driven meiotic oscillatory nuclear movement (ortholog); microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955472 1511984 1521148 + 102022382 AGCD01053397;AGCD01053398;GBDI01005417;XM_005401050;XM_005401053 XP_005401107;XP_005401110 MODEL 8807163 pseudo LOC102003433 heterogeneous nuclear ribonucleoprotein A1-like NW_004955469 9146985 9148365 + 102003433 AGCD01052493 MODEL 9067189 protein-coding Polm DNA polymerase mu ENCODES a protein that exhibits DNA-directed DNA polymerase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN B cell differentiation (ortholog); somatic hypermutation of immunoglobulin genes (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955456 7886182 7893800 + 102022672 AGCD01046435;GBDI01125354;XM_005396675;XM_005396676;XM_005396677;XM_005396678;XM_005396679 XP_005396732;XP_005396733;XP_005396734;XP_005396735;XP_005396736 MODEL 8866903 protein-coding Arl6ip1 ARL6 interacting reticulophagy regulator 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cotranslational protein targeting to membrane (ortholog); endoplasmic reticulum tubular network formation (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955442 2540676 2550531 - 102030480 AGCD01037468;GBDF01002518;XM_005391087 XP_005391144 MODEL 9008764 protein-coding Rab11fip4 RAB11 family interacting protein 4 ENCODES a protein that exhibits protein homodimerization activity (ortholog); small GTPase binding (ortholog); INVOLVED IN neural retina development (ortholog); positive regulation of G1 to G0 transition (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasmic vesicle (ortholog); endocytic vesicle (ortholog) NW_004955481 6501704 6554448 + 102010695 AGCD01057029;AGCD01057030;GBBH01052215;XM_013503485;XM_013503486 XP_013358939;XP_013358940 MODEL 8965573 protein-coding LOC102022048 uncharacterized LOC102022048 NW_004955407 40772585 40774323 - 102022048 AGCD01007850;GBCQ01148300;XM_013506362;XR_259635 XP_013361816 MODEL 8751044 protein-coding Ranbp9 RAN binding protein 9 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of amyloid precursor protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955465 1042649 1122824 + 102010784 AGCD01050330;AGCD01050331;GBBH01102333;GBDF01003318;XM_005398797 XP_005398854 MODEL 8904983 protein-coding LOC102007821 N-formyl peptide receptor 2 NW_004955558 780076 787914 - 102007821 AGCD01073389;AGCD01073390;GBDI01325712;XM_005412670;XM_013508870;XM_013508871 XP_005412727;XP_013364324;XP_013364325 MODEL 8982833 protein-coding Ppox protoporphyrinogen oxidase ENCODES a protein that exhibits protoporphyrinogen oxidase activity, oxygen as acceptor (ortholog); INVOLVED IN heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); heme biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); acute porphyria (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial membrane (ortholog) NW_004955468 12930387 12934437 + 102004053 AGCD01052192;AGCD01052193;GBDF01155905;XM_005400257;XM_013522352 XP_005400314;XP_013377806 MODEL 8798320 protein-coding Lrrc8b leucine rich repeat containing 8 VRAC subunit B ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN monoatomic anion transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); monoatomic ion channel complex (ortholog); plasma membrane (ortholog) NW_004955423 4585902 4612008 - 102008550 AGCD01023540;GBDF01083900;XM_005385088;XM_005385091;XM_013514456;XM_013514457;XM_013514458 XP_005385145;XP_005385148;XP_013369910;XP_013369911;XP_013369912 MODEL 39133806 misc_rna 7SK 7SK RNA 8824225 protein-coding Tafa2 TAFA chemokine like family member 2 INVOLVED IN memory (ortholog); visual learning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 8935792 9351358 - 102016133 AGCD01047627;AGCD01047628;AGCD01047629;AGCD01047630;AGCD01047631;AGCD01047632;AGCD01047633;AGCD01047634;AGCD01047635;AGCD01047636;AGCD01047637;AGCD01047638;GBCE01183273;XM_013521029;XM_013521030;XM_013521031 XP_013376483;XP_013376484;XP_013376485 MODEL 8751788 protein-coding Slc22a14 solute carrier family 22 member 14 ENCODES a protein that exhibits riboflavin transmembrane transporter activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); sperm principal piece (ortholog) NW_004955421 5009560 5023833 - 102014789 AGCD01021710;GBDF01124260;XM_005383731;XM_005383732;XM_005383733;XM_005383734;XM_013513634 XP_005383788;XP_005383789;XP_005383790;XP_005383791;XP_013369088 MODEL 39133449 snorna SNORD58 Small nucleolar RNA SNORD58 8960158 protein-coding Dffb DNA fragmentation factor subunit beta ENCODES a protein that exhibits DNA binding (ortholog); DNA nuclease activity (ortholog); enzyme binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); apoptotic DNA fragmentation (ortholog); DNA catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chromosome Breakage (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955486 7836013 7849875 - 102021247 AGCD01059138;GBDK01277050;XM_005404126;XM_005404127;XM_005404128;XM_005404129;XM_005404131;XM_013504195 XP_005404183;XP_005404184;XP_005404185;XP_005404186;XP_005404188;XP_013359649 MODEL 8846397 protein-coding Ints2 integrator complex subunit 2 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955451 2822081 2876117 - 102010115 AGCD01043023;AGCD01043024;GBDJ01299082;XM_005393971 XP_005394028 MODEL 8920562 protein-coding Xkr8 XK related 8 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN engulfment of apoptotic cell (ortholog); neutrophil clearance (ortholog); phosphatidylserine exposure on apoptotic cell surface (ortholog); ASSOCIATED WITH lung cancer (ortholog); thymoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 7141088 7148571 + 102018681 AGCD01044136;AGCD01044137;GBBH01041411;GBDF01195794;XM_013519543 XP_013374997 MODEL 8871301 protein-coding Efhc1 EF-hand domain containing 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN cerebral cortex cell migration (ortholog); flagellated sperm motility (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955411 5624510 5676165 - 102012618 AGCD01011654;GBBH01114393;GBDF01002191;XM_013510761 XP_013366215 MODEL 8721093 ncrna LOC102010512 uncharacterized LOC102010512 NW_004955432 10654891 10664188 - 102010512 AGCD01030936;GBCE01078510;XR_001234668;XR_261522 MODEL 8744069 ncrna LOC102009348 uncharacterized LOC102009348 NW_004955455 11123017 11124542 - 102009348 AGCD01045984;GBDF01074169;XR_262855;XR_262856 MODEL 39132346 rrna 5S_rRNA 5S ribosomal RNA 8976681 ncrna LOC102003787 uncharacterized LOC102003787 NW_004955505 1073276 1075559 - 102003787 AGCD01064967;GBDF01042900;XR_264300 MODEL 8810185 pseudo LOC102025943 heterogeneous nuclear ribonucleoproteins A2/B1-like NW_004955543 2450899 2498166 - 102025943 AGCD01071653;AGCD01071654 MODEL 8848229 protein-coding Siglecl1 SIGLEC family like 1 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955558 1101532 1116578 - 102014502 AGCD01073415;AGCD01073416;GBDF01190924;GBDF01190934;XM_013508840 XP_013364294 MODEL 8845675 protein-coding Caln1 calneuron 1 INVOLVED IN gene expression (ortholog); Golgi organization (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN postsynaptic density (ortholog); trans-Golgi network membrane (ortholog) NW_004955456 9079917 9547459 + 102010771 AGCD01046506;AGCD01046507;AGCD01046508;AGCD01046509;AGCD01046510;AGCD01046511;AGCD01046512;GBDF01134483;XM_005396727;XM_005396728;XM_005396729;XM_005396730;XM_013520647;XM_013520648;XM_013520649 XP_005396784;XP_005396785;XP_005396786;XP_005396787;XP_013376101;XP_013376102;XP_013376103 MODEL 8705219 pseudo LOC102018738 reactive oxygen species modulator 1 pseudogene NW_004955493 7585489 7586094 - 102018738 AGCD01061202;XM_005405270 MODEL 8829468 protein-coding Arl6ip4 ARF like GTPase 6 interacting protein 4 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955482 5804393 5807460 - 102027526 AGCD01057348;AGCD01057349;GBCB01106910;GBCQ01007285;XM_013503665 XP_013359119 MODEL 9030958 protein-coding Sack1g scaffolding CK1 anchoring protein G INVOLVED IN BMP signaling pathway (ortholog); ASSOCIATED WITH palmoplantar keratosis (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955467 594921 623661 + 102005018 AGCD01051226;AGCD01051227;GBDK01060112;XM_005399278;XM_013522189 XP_005399335;XP_013377643 MODEL 8831598 protein-coding Poln DNA polymerase nu ENCODES a protein that exhibits cyclin binding (ortholog); DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); translesion synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955514 1214867 1342172 - 102022319 AGCD01067041;AGCD01067042;AGCD01067043;AGCD01067044;AGCD01067045;AGCD01067046;AGCD01067047;GBDJ01030074;XM_013506823;XM_013506824;XM_013506825;XM_013506826;XM_013506827;XM_013506829 XP_013362277;XP_013362278;XP_013362279;XP_013362280;XP_013362281;XP_013362283 MODEL 9053486 protein-coding LOC102012969 uncharacterized LOC102012969 NW_004955486 114376 172776 - 102012969 AGCD01058804;AGCD01058805;AGCD01058806;AGCD01058807;AGCD01058808;AGCD01058809;AGCD01058810;AGCD01058811;AGCD01058812;AGCD01058813;AGCD01058814;AGCD01058815;AGCD01058816;GBDF01153096;XM_013504134 XP_013359588 MODEL 39134499 misc_rna 7SK 7SK RNA 8923945 protein-coding LOC102011292 translation initiation factor IF-2-like NW_004955411 5098018 5101336 - 102011292 AGCD01011594;GBDF01039872;XM_005377923 XP_005377980 MODEL 8797806 protein-coding Coro1b coronin 1B ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament branching (ortholog); actin filament bundle assembly (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin filament (ortholog); cell leading edge (ortholog); cell periphery (ortholog) NW_004955422 18035629 18041009 + 102017782 AGCD01022936;GBDJ01011066;XM_005384327;XM_005384328;XM_013513936 XP_005384384;XP_005384385;XP_013369390 MODEL 8835764 protein-coding LOC102022049 uncharacterized LOC102022049 NW_004955407 41023365 41029770 - 102022049 AGCD01007854;XM_005375988 XP_005376045 MODEL 8935078 protein-coding Dusp29 dual specificity phosphatase 29 ENCODES a protein that exhibits MAP kinase phosphatase activity (ortholog); protein homodimerization activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); muscle cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955437 17002269 17037750 + 102028894 AGCD01034729;AGCD01034730;GBBH01060435;XM_013517070;XM_013517071;XM_013517072;XM_013517073;XM_013517074 XP_013372524;XP_013372525;XP_013372526;XP_013372527;XP_013372528 MODEL 39131701 rrna 5S_rRNA 5S ribosomal RNA 8781097 protein-coding Foxj1 forkhead box J1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axoneme assembly (ortholog); brain development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); congenital heart disease (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) NW_004955506 6127551 6132302 + 102027554 AGCD01065402;GBDI01063226;XM_005407440 XP_005407497 MODEL 8805567 ncrna LOC102005221 uncharacterized LOC102005221 NW_004955454 2294868 2299079 + 102005221 AGCD01045015;GBDI01003932;XR_262766;XR_262767 MODEL 10279190 ncrna LOC106147475 uncharacterized LOC106147475 NW_004955566 1364512 1369326 - 106147475 AGCD01074358;GBCB01007922;XR_001232396 MODEL 150537103 snorna SNORA53 Small nucleolar RNA SNORA53 39133472 snrna U4 U4 spliceosomal RNA 8952266 protein-coding Ccer1 coiled-coil glutamate rich protein 1 INVOLVED IN sperm DNA condensation (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) NW_004955405 28171582 28173380 - 102018055 AGCD01005232;GBDF01007441;XM_005374445 XP_005374502 MODEL 8830918 pseudo LOC102024134 eukaryotic translation initiation factor 5 pseudogene NW_004955424 14792124 14793737 + 102024134 AGCD01024660 MODEL 8914309 protein-coding Ints3 integrator complex subunit 3 INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955545 352170 394751 + 102019851 AGCD01071790;GBDF01007991;XM_005411440 XP_005411497 MODEL 8792457 ncrna LOC102012575 uncharacterized LOC102012575 NW_004955437 2310695 2312191 + 102012575 AGCD01034263;XR_261833 MODEL 8900974 protein-coding Rab11fip5 RAB11 family interacting protein 5 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to type II interferon (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); mitochondrial outer membrane (ortholog) NW_004955424 12506738 12544284 + 102019291 AGCD01024613;AGCD01024614;GBBH01155266;GBDF01046089;XM_005385572;XM_005385573;XM_005385574 XP_005385629;XP_005385630;XP_005385631 MODEL 10204494 ncrna LOC106148564 uncharacterized LOC106148564 NW_004955424 23450310 23453592 + 106148564 AGCD01025014;GBDF01035040;XR_001234137 MODEL 8945846 protein-coding Elovl3 ELOVL fatty acid elongase 3 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955485 8141818 8144458 - 102020124 AGCD01058692;XM_005403852;XM_013504025 XP_005403909;XP_013359479 MODEL 8880004 protein-coding Calr calreticulin ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to electrical stimulus (ortholog); cellular response to lithium ion (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Burkitt lymphoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); cytolytic granule (ortholog) NW_004955415 31985147 31989372 + 102025785 AGCD01016704;GBDF01006931;XM_005381041 XP_005381098 MODEL 8748778 pseudo LOC102007822 60S ribosomal protein L27a pseudogene NW_004955442 13747235 13747833 + 102007822 AGCD01037787 MODEL 9061266 pseudo LOC102029854 60S ribosomal protein L8 pseudogene NW_004955473 10934771 10936678 + 102029854 AGCD01054122 MODEL 8861842 protein-coding Chrm5 cholinergic receptor muscarinic 5 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN regulation of dopamine secretion (ortholog); regulation of phosphatidylinositol dephosphorylation (ortholog); transmission of nerve impulse (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis dependence (ortholog); Cocaine-Related Disorders (ortholog) NW_004955416 526718 528353 - 102022696 AGCD01016810;XM_005381165 XP_005381222 MODEL 9018083 ncrna LOC102012970 uncharacterized LOC102012970 NW_004955420 29437923 29445279 + 102012970 AGCD01021502;GBDJ01336190;XR_001233709;XR_001233710 MODEL 8925626 protein-coding Tslig3c tRNA splicing ligase complex subunit 3C ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955468 1021711 1025566 - 102014227 AGCD01051748;GBCE01154383;XM_005399847 XP_005399904 MODEL 9043692 protein-coding Tafa3 TAFA chemokine like family member 3 INVOLVED IN negative regulation of microglial cell activation (ortholog); positive regulation of microglial cell activation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN extracellular region (ortholog) NW_004955435 16132345 16142291 + 102006816 AGCD01033296;GBCB01120795;GBDI01094729;XM_005388970 XP_005389027 MODEL 8877264 protein-coding Rgs22 regulator of G protein signaling 22 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955417 15284368 15381984 - 102014356 AGCD01018227;AGCD01018228;AGCD01018229;AGCD01018230;AGCD01018231;GBBH01116898;XM_013512826 XP_013368280 MODEL 8994646 protein-coding Slc22a15 solute carrier family 22 member 15 ENCODES a protein that exhibits amino-acid betaine transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955435 19183832 19260412 + 102028228 AGCD01033422;AGCD01033423;AGCD01033424;GBBH01127158;GBCE01159916;XM_005389035 XP_005389092 MODEL 39131702 rrna 5S_rRNA 5S ribosomal RNA 8701672 protein-coding LOC102009351 olfactory receptor 1361-like NW_004955408 1568710 1569651 + 102009351 AGCD01007965;XM_005376033 XP_005376090 MODEL 8846332 ncrna LOC102006682 uncharacterized LOC102006682 NW_004955423 21568062 21582267 + 102006682 AGCD01023945;GBDF01193731;XR_260985 MODEL 8866976 protein-coding LOC102003791 olfactory receptor 5D18-like NW_004955511 564979 565959 - 102003791 AGCD01066333;XM_005408200 XP_005408257 MODEL 8841209 protein-coding Ctxn3 cortexin 3 NW_004955415 731895 741765 + 102030412 AGCD01015853;XM_005380546 XP_005380603 MODEL 8912965 protein-coding Tslp thymic stromal lymphopoietin ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-7 receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Albuminuria (ortholog); allergic contact dermatitis (ortholog); FOUND IN astrocyte projection (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955418 4041529 4045534 - 102025006 AGCD01018807;XM_005382342 XP_005382399 MODEL 8777141 protein-coding Ptp4a2 protein tyrosine phosphatase 4A2 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955452 10293958 10331868 - 102013578 AGCD01044271;AGCD01044272;AGCD01044273;GBDI01068104;XM_005395037 XP_005395094 MODEL 39133474 snrna U4 U4 spliceosomal RNA 8740437 protein-coding Arl6ip5 ARF like GTPase 6 interacting protein 5 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); glutathione metabolic process (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); Experimental Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955421 18747729 18766559 - 102012205 AGCD01022053;GBCC01015736;XM_005383809;XM_005383810 XP_005383866;XP_005383867 MODEL 8869956 ncrna LOC102024140 uncharacterized LOC102024140 NW_004955504 398960 407704 + 102024140 AGCD01064819;GBDK01412395;XR_001231548;XR_001231549;XR_264269 MODEL 8775019 protein-coding Lrrc8c leucine rich repeat containing 8 VRAC subunit C ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cellular response to osmotic stress (ortholog); cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); multiple sclerosis (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); monoatomic ion channel complex (ortholog) NW_004955423 4460212 4494317 - 102006788 AGCD01023535;GBDI01105547;XM_005385085;XM_013514541 XP_005385142;XP_013369995 MODEL 8899589 protein-coding Bcat2 branched chain amino acid transaminase 2 ENCODES a protein that exhibits branched-chain-amino-acid:2-oxoglutarate transaminase activity (ortholog); L-isoleucine:2-oxoglutarate transaminase activity (ortholog); L-leucine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN branched-chain amino acid biosynthetic process (ortholog); branched-chain amino acid catabolic process (ortholog); branched-chain amino acid metabolic process (ortholog); PARTICIPATES IN valine, leucine and isoleucine biosynthetic pathway; valine, leucine and isoleucine degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); hypervalinemia and hyperleucine-isoleucinemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955559 1785253 1796838 + 102030010 AGCD01073666;GBBH01065802;XM_013509037 XP_013364491 MODEL 8708921 protein-coding Polq DNA polymerase theta ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); ATP hydrolysis activity (ortholog); chromatin binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); mitochondrial nucleoid (ortholog); nucleoplasm (ortholog) NW_004955427 20779332 20895094 - 102029881 AGCD01027416;AGCD01027417;AGCD01027418;AGCD01027419;AGCD01027420;AGCD01027421;AGCD01027422;AGCD01027423;GBDJ01300677;XM_005386484;XM_013515227;XM_013515228 XP_005386541;XP_013370681;XP_013370682 MODEL 8942715 protein-coding Exosc1 exosome component 1 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nucleolus (ortholog) NW_004955507 3576555 3583183 - 102024828 AGCD01065631;GBDJ01181029;XM_005407601 XP_005407658 MODEL 8844479 protein-coding Dgat1 diacylglycerol O-acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); acyltransferase activity (ortholog); diacylglycerol binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); fatty acid homeostasis (ortholog); glycerolipid metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH cardiomyopathy (ortholog); cervical cancer (ortholog); chronic kidney disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955454 2933904 2944675 - 102029149 AGCD01045040;GBDK01293190;XM_005395868 XP_005395925 MODEL 9057666 pseudo LOC102029855 60S ribosomal protein L39-like NW_004955474 2584321 2609521 - 102029855 AGCD01054299 MODEL 9014717 protein-coding Dctn4 dynactin subunit 4 INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); dynactin complex (ortholog) NW_004955415 3850475 3886953 + 102012531 AGCD01015956;AGCD01015957;AGCD01015958;GBDK01283632;XM_005380566;XM_013512222 XP_005380623;XP_013367676 MODEL 8885594 ncrna LOC102010513 uncharacterized LOC102010513 NW_004955518 2093768 2169658 - 102010513 AGCD01067771;GBDI01245852;XR_001231842;XR_001231843;XR_001231844;XR_001231845;XR_001231846;XR_001231847;XR_001231848;XR_264567 MODEL 39132351 rrna 5S_rRNA 5S ribosomal RNA 8718174 protein-coding Xkr9 XK related 9 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine exposure on apoptotic cell surface (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955444 9027662 9059911 - 102029130 AGCD01038953;AGCD01038954;AGCD01038955;AGCD01038956;GBCQ01014012;XM_005392101;XM_005392102;XM_013518143;XM_013518144;XM_013518145 XP_005392158;XP_005392159;XP_013373597;XP_013373598;XP_013373599 MODEL 8718368 protein-coding Tinag tubulointerstitial nephritis antigen INVOLVED IN cell adhesion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN basement membrane (ortholog); non-collagenous component of basement membrane (ortholog) NW_004955411 1718969 1809370 - 102006107 AGCD01011487;AGCD01011488;AGCD01011489;AGCD01011490;GBCQ01040782;XM_005377590;XM_013510703 XP_005377647;XP_013366157 MODEL 8703224 pseudo LOC102018739 non-histone chromosomal protein HMG-14 pseudogene NW_004955422 17353812 17357226 + 102018739 AGCD01022920;AGCD01022921 MODEL 9050973 pseudo LOC102005574 ATP-binding cassette sub-family F member 2-like NW_004955463 4656863 4661099 + 102005574 AGCD01049614 MODEL 8707739 pseudo LOC102006300 60S ribosomal protein L30-like NW_004955402 43644927 43645275 + 102006300 AGCD01001075 MODEL 8703988 protein-coding Rangap1 Ran GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); RNA binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to peptide hormone stimulus (ortholog); cellular response to vasopressin (ortholog); negative regulation of protein export from nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Carotid Artery Injuries (ortholog); FOUND IN axon cytoplasm (ortholog); cytoplasm (ortholog); cytoplasmic periphery of the nuclear pore complex (ortholog) NW_004955413 26869487 26894192 - 102016691 AGCD01014485;GBDJ01275353;XM_005379343;XM_005379344;XM_013511354 XP_005379400;XP_005379401;XP_013366808 MODEL 8996227 pseudo LOC102029857 28S ribosomal protein S15, mitochondrial pseudogene NW_004955416 2809650 2810595 - 102029857 AGCD01016862 MODEL 8839223 protein-coding Ppp1ca protein phosphatase 1 catalytic subunit alpha ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); iron ion binding (ortholog); phosphatase activity (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; Bone morphogenetic proteins signaling pathway; dopamine signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN adherens junction (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955422 18076670 18079859 + 102022506 AGCD01022936;GBDF01050912;XM_005384345 XP_005384402 MODEL 39134500 misc_rna 7SK 7SK RNA 8959976 protein-coding Sack1h scaffolding CK1 anchoring protein H ENCODES a protein that exhibits keratin filament binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intermediate filament cytoskeleton organization (ortholog); positive regulation of cell migration (ortholog); protein localization to cytoskeleton (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 3A (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); keratin filament (ortholog) NW_004955454 2421393 2436012 - 102012607 AGCD01045020;AGCD01045021;GBCE01152697;XM_005395808;XM_005395810;XM_005395811;XM_013520054 XP_005395865;XP_005395867;XP_005395868;XP_013375508 MODEL 8890070 pseudo LOC102022051 methionine aminopeptidase 2-like NW_004955408 16895723 16898339 + 102022051 AGCD01008448 MODEL 39133450 snorna SNORD58 Small nucleolar RNA SNORD58 8987695 pseudo LOC102012971 spermine synthase pseudogene NW_004955422 11371620 11373194 + 102012971 AGCD01022755 MODEL 10062671 pseudo LOC106148565 transcription elongation factor B polypeptide 1 pseudogene NW_004955424 22950989 22952814 - 106148565 AGCD01024995 MODEL 8797368 protein-coding LOC102003434 olfactory receptor 51M1-like NW_004955414 21278585 21279689 + 102003434 AGCD01015411;XM_013511772 XP_013367226 MODEL 8946911 protein-coding LOC102007826 zinc finger protein 14-like NW_004955569 1580699 1628988 + 102007826 AGCD01074671;AGCD01074672;AGCD01074673;GBDI01333117;XM_005413504 XP_005413561 MODEL 8714405 pseudo LOC102025233 olfactory receptor 52B2-like NW_004955414 20838501 20839444 - 102025233 AGCD01015390 MODEL 8865229 protein-coding Sigmar1 sigma non-opioid intracellular receptor 1 ENCODES a protein that exhibits G protein-coupled opioid receptor activity (ortholog); identical protein binding (ortholog); mu-type opioid receptor binding (ortholog); INVOLVED IN conditioned place preference (ortholog); cyclooxygenase pathway (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amnestic disorder (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955472 1493896 1496377 + 102021872 AGCD01053395;GBDI01070822;XM_005401048 XP_005401105 MODEL 9019269 protein-coding LOC102005225 SEC14-like protein 4 NW_004955455 4754888 4766499 - 102005225 AGCD01045688;GBDK01339586;XM_013520306 XP_013375760 MODEL 8896317 protein-coding Efhc2 EF-hand domain containing 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); ciliary basal body (ortholog) NW_004955516 3867542 4036049 + 102005495 AGCD01067515;AGCD01067516;GBDF01195979;XM_005408997 XP_005409054 MODEL 8717015 protein-coding LOC102025955 NXPE family member 3-like NW_004955573 723592 744642 + 102025955 AGCD01075003;AGCD01075004;GBCE01055284;XM_005413736 XP_005413793 MODEL 730469240 snorna SNORA53 Small nucleolar RNA SNORA53 10230970 protein-coding LOC106147476 olfactory receptor 1G1-like NW_004955567 161744 180130 + 106147476 AGCD01074382;AGCD01074383;AGCD01074384;AGCD01074385;GBBH01156591;XM_013509221 XP_013364675 MODEL 8757427 ncrna LOC102012577 uncharacterized LOC102012577 NW_004955437 7996387 8008061 - 102012577 AGCD01034476;GBDF01158367;XR_261866 MODEL 8897914 ncrna LOC102006684 uncharacterized LOC102006684 NW_004955497 7496522 7500425 - 102006684 AGCD01062678;GBDJ01389347;XR_001231425;XR_264211 MODEL 39131569 protein-coding CTXND1 cortexin domain containing 1 8769547 protein-coding Ints4 integrator complex subunit 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955414 13934830 14053648 + 102006762 AGCD01015131;AGCD01015132;AGCD01015133;AGCD01015134;AGCD01015135;AGCD01015136;AGCD01015137;AGCD01015138;AGCD01015139;AGCD01015140;AGCD01015141;GBDF01123228;XM_005379824;XM_005379825 XP_005379881;XP_005379882 MODEL 8950473 protein-coding Coro1c coronin 1C ENCODES a protein that exhibits actin filament binding (ortholog); small GTPase binding (ortholog); INVOLVED IN corpus callosum development (ortholog); endosomal transport (ortholog); endosome fission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); endosome membrane (ortholog) NW_004955455 9905243 9952504 - 102027145 AGCD01045932;AGCD01045933;GBBH01005477;XM_013520465 XP_013375919 MODEL 39133485 snrna U4 U4 spliceosomal RNA 8861575 pseudo LOC102012580 SPRY domain-containing protein 4 pseudogene NW_004955538 3531985 3536331 - 102012580 AGCD01071169 MODEL 8732067 protein-coding Dusp3 dual specificity phosphatase 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); MAP kinase phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); flagellated sperm motility (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); lung cancer (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); cytosol (ortholog); immunological synapse (ortholog) NW_004955451 17064739 17069964 - 102004773 AGCD01043716;GBCB01004598;GBDF01053135;XM_013519428 XP_013374882 MODEL 9055997 protein-coding Rab12 RAB12, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); endosome to lysosome transport (ortholog); positive regulation of macroautophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN autophagosome (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955402 3102709 3109701 - 102028917 AGCD01000096;GBCB01005815;GBDK01084463;XM_013516234 XP_013371688 MODEL 8828591 protein-coding Calr3 calreticulin 3 ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FAMILIAL HYPERTROPHIC CARDIOMYOPATHY 19 (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) NW_004955524 1245607 1256528 + 102025612 AGCD01068740;GBDK01091722;XM_005409493;XM_005409495 XP_005409550;XP_005409552 MODEL 8905023 protein-coding Arl6ip6 ARF like GTPase 6 interacting protein 6 ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear inner membrane (ortholog) NW_004955440 18131030 18166804 + 102009654 AGCD01036597;AGCD01036598;GBDF01122433;XM_013517457;XM_013517458;XM_013517459;XR_001235264;XR_001235265;XR_001235266;XR_001235267;XR_001235268 XP_013372911;XP_013372912;XP_013372913 MODEL 8963225 protein-coding Chrna1 cholinergic receptor nicotinic alpha 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); muscle cell cellular homeostasis (ortholog); musculoskeletal movement (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 1A (ortholog); congenital myasthenic syndrome 1B (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955449 661310 683873 + 102005534 AGCD01041771;GBBH01129594;XM_005393183 XP_005393240 MODEL 39131703 rrna 5S_rRNA 5S ribosomal RNA 8819018 protein-coding Dgat2 diacylglycerol O-acyltransferase 2 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); diacylglycerol O-acyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to oleic acid (ortholog); cholesterol homeostasis (ortholog); diacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955414 16059781 16089727 - 102022183 AGCD01015197;GBDF01054643;XM_005379877;XM_005379878 XP_005379934;XP_005379935 MODEL 8839133 protein-coding Rgs3 regulator of G protein signaling 3 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955419 13918274 14042090 - 102019811 AGCD01020009;GBBH01229198;XM_005382663;XM_005382665;XM_005382666;XM_005382668;XM_005382669;XM_005382670;XM_005382672;XM_005382673;XM_013513122;XM_013513124 XP_005382720;XP_005382722;XP_005382723;XP_005382725;XP_005382726;XP_005382727;XP_005382729;XP_005382730;XP_013368576;XP_013368578 MODEL 8903857 ncrna LOC102005231 uncharacterized LOC102005231 NW_004955458 14978213 15025603 - 102005231 AGCD01047858;AGCD01047859;AGCD01047860;GBDF01226889;XR_001236482;XR_263001 MODEL 8965336 protein-coding LOC102012974 ubiquinol-cytochrome-c reductase complex assembly factor 1 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN Cbp3p-Cbp6 complex (ortholog); cytoplasmic vesicle (ortholog); mitochondrial inner membrane (ortholog) NW_004955422 26009078 26096300 + 102012974 AGCD01023273;AGCD01023274;AGCD01023275;GBDF01119443;XM_005384797 XP_005384854 MODEL 8769971 protein-coding Dctn5 dynactin subunit 5 INVOLVED IN aorta development (ortholog); coronary vasculature development (ortholog); dynein-driven meiotic oscillatory nuclear movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); dynactin complex (ortholog) NW_004955493 2175585 2204742 + 102023486 AGCD01060932;AGCD01060933;AGCD01060934;AGCD01060935;GBDF01123485;XM_005405104;XR_264075 XP_005405161 MODEL 8838828 pseudo LOC102003793 R-spondin-3 pseudogene NW_004955514 156613 206653 - 102003793 AGCD01066997;AGCD01066998;AGCD01066999;AGCD01067000;AGCD01067001 MODEL 9033867 protein-coding Tsn translin ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN RISC complex assembly (ortholog); siRNA processing (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); endoribonuclease complex (ortholog); nucleoplasm (ortholog) NW_004955459 8285442 8299329 - 102012835 AGCD01048139;GBDJ01275284;XM_005397637 XP_005397694 MODEL 8716906 ncrna LOC102018740 uncharacterized LOC102018740 NW_004955423 15350156 15352340 + 102018740 AGCD01023805;GBCB01061780;XR_260970 MODEL 8825996 protein-coding Elovl4 ELOVL fatty acid elongase 4 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN circadian rhythm (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Ataxia (ortholog); autosomal recessive congenital ichthyosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955502 7764451 7774503 - 102016495 AGCD01064461;GBCC01001147;XM_013505842 XP_013361296 MODEL 9038631 pseudo LOC102024142 TATA box-binding protein-associated factor RNA polymerase I subunit D pseudogene NW_004955505 4170938 4174564 - 102024142 AGCD01065092 MODEL 8836357 protein-coding Ptp4a3 protein tyrosine phosphatase 4A3 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); endothelial cell migration (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colonic Neoplasms (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955454 429051 440328 + 102015689 AGCD01044958;GBDI01229359;XM_005395723;XM_013520280;XM_013520281;XM_013520282 XP_005395780;XP_013375734;XP_013375735;XP_013375736 MODEL 8773230 protein-coding Ppp1cb protein phosphatase 1 catalytic subunit beta ENCODES a protein that exhibits myosin-light-chain-phosphatase activity (ortholog); phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; dopamine signaling pathway; glycogen biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cryptorchidism (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955469 10657029 10682398 + 102015501 AGCD01052544;GBCQ01003561;XM_005400536;XM_013522618 XP_005400593;XP_013378072 MODEL 9018379 protein-coding Foxj2 forkhead box J2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN male meiosis I (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of blood vessel endothelial cell differentiation (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 6692343 6705760 + 102027629 AGCD01013772;GBDK01083131;XM_013511495;XM_013511496 XP_013366949;XP_013366950 MODEL 8725502 protein-coding Slc22a2 solute carrier family 22 member 2 ENCODES a protein that exhibits acetylcholine transmembrane transporter activity (ortholog); amine transmembrane transporter activity (ortholog); choline transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine transport (ortholog); amine transport (ortholog); amino acid import across plasma membrane (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); clear cell renal cell carcinoma (ortholog); end stage renal disease (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955439 20567241 20608281 + 102012688 AGCD01036118;AGCD01036119;GBCQ01009150;XM_005390703;XM_005390704 XP_005390760;XP_005390761 MODEL 8749697 protein-coding Bccip BRCA2 and CDKN1A interacting protein ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); kinase regulator activity (ortholog); INVOLVED IN DNA damage response (ortholog); establishment of mitotic spindle orientation (ortholog); microtubule anchoring (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); mitotic spindle pole (ortholog) NW_004955477 3707230 3721195 + 102009834 AGCD01055561;AGCD01055562;GBDI01170730;XM_005401998 XP_005402055 MODEL 8775130 protein-coding LOC102012581 uncharacterized LOC102012581 NW_004955437 3361650 3366877 + 102012581 AGCD01034309;GBDF01223138;XM_013516728 XP_013372182 MODEL 10101759 pseudo LOC106148566 translation initiation factor IF-2, mitochondrial pseudogene NW_004955424 21310778 21311989 - 106148566 AGCD01024896 MODEL 39133807 misc_rna 7SK 7SK RNA 8942066 protein-coding Ccer2 coiled-coil glutamate rich protein 2 NW_004955468 614223 616989 + 102030060 AGCD01051719;GBDJ01278351;XM_005399803;XM_013522418 XP_005399860;XP_013377872 MODEL 8930363 pseudo LOC102025235 DNA-(apurinic or apyrimidinic site) lyase-like NW_004955472 7626486 7627408 - 102025235 AGCD01053624 MODEL 39131704 rrna 5S_rRNA 5S ribosomal RNA 9028489 pseudo LOC102025964 condensin-2 complex subunit G2 pseudogene NW_004955450 6008349 6010451 - 102025964 AGCD01042517 MODEL 9042646 protein-coding Rangrf RAN guanine nucleotide release factor ENCODES a protein that exhibits channel activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); mitotic spindle assembly (ortholog); positive regulation of membrane depolarization during cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Cardiac Arrhythmias (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 8622843 8624401 - 102019489 AGCD01051463;GBDI01136193;XM_005399416 XP_005399473 MODEL 8938032 ncrna LOC102003796 uncharacterized LOC102003796 NW_004955433 12458790 12516903 - 102003796 AGCD01031664;GBBH01126520;XR_001234747;XR_001234748;XR_001234749;XR_001234750;XR_001234751;XR_001234752;XR_261587 MODEL 8826588 protein-coding Rgs4 regulator of G protein signaling 4 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN dorsal root ganglion development (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); negative regulation of dopamine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; calcium signaling pathway via the calcium-sensing receptor; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH alcohol dependence (ortholog); bladder disease (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955462 13340812 13347598 - 102009474 AGCD01049425;GBCQ01144636;XM_005398260;XM_005398261 XP_005398317;XP_005398318 MODEL 8811877 protein-coding LOC102005576 histone H2B NW_004955465 13104644 13110046 - 102005576 AGCD01050585;GBDF01248769;XM_005398947 XP_005399004 MODEL 8768678 protein-coding Ints5 integrator complex subunit 5 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH melanoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) NW_004955599 551989 556341 + 102021504 AGCD01076659;GBDJ01144296;XM_005414805 XP_005414862 MODEL 8817217 protein-coding Sacm1l SAC1 like phosphatidylinositide phosphatase ENCODES a protein that exhibits phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); neurotransmitter receptor transport to postsynaptic membrane (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955420 26231597 26280516 - 102006918 AGCD01021396;AGCD01021397;AGCD01021398;GBDI01179708;XM_005383470 XP_005383527 MODEL 8949575 protein-coding Polr1a RNA polymerase I subunit A ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN negative regulation of protein localization to nucleolus (ortholog); rRNA transcription (ortholog); transcription by RNA polymerase I (ortholog); PARTICIPATES IN nucleotide excision repair pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH acrofacial dysostosis Cincinnati type (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); fibrillar center (ortholog) NW_004955424 1507935 1595068 + 102021143 AGCD01024237;AGCD01024238;AGCD01024239;AGCD01024240;GBDK01177247;XM_005385408;XM_005385411 XP_005385465;XP_005385468 MODEL 8791098 protein-coding Exosc10 exosome component 10 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); RNA exonuclease activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN CUT catabolic process (ortholog); histone mRNA catabolic process (ortholog); maturation of 5.8S rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955486 2601362 2626451 + 102011668 AGCD01058999;AGCD01059000;GBDF01048997;XM_005404005;XR_263942 XP_005404062 MODEL 8883968 protein-coding Tafa4 TAFA chemokine like family member 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN macrophage chemotaxis (ortholog); phagocytosis (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); synaptic vesicle membrane (ortholog) NW_004955421 18920551 19083792 + 102014368 AGCD01022061;GBBH01123399;XM_005383816;XM_013513639;XM_013513640 XP_005383873;XP_013369093;XP_013369094 MODEL 39132358 rrna 5S_rRNA 5S ribosomal RNA 8872806 pseudo LOC102009352 DCN1-like protein 5 pseudogene NW_004955456 8139806 8140820 + 102009352 AGCD01046454 MODEL 9057926 ncrna LOC102010517 uncharacterized LOC102010517 NW_004955530 2532397 2639683 + 102010517 AGCD01069921;AGCD01069922;AGCD01069923;AGCD01069924;AGCD01069925;AGCD01069926;AGCD01069927;GBDF01160127;XR_001231996;XR_001231997;XR_001231998;XR_264710 MODEL 8739725 protein-coding Dusp4 dual specificity phosphatase 4 ENCODES a protein that exhibits MAP kinase serine/threonine phosphatase activity (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955463 5778945 5794282 - 102021217 AGCD01049644;GBCE01111467;XM_005398363 XP_005398420 MODEL 730469411 snorna SNORA54 Small nucleolar RNA SNORA54 9013909 protein-coding Arl8a ARF like GTPase 8A ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); spindle midzone (ortholog) NW_004955406 38223115 38226563 - 102005561 AGCD01006597;GBCE01096074;GBDF01193465;XM_005375476 XP_005375533 MODEL 8832226 protein-coding Tinagl1 tubulointerstitial nephritis antigen like 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); laminin binding (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955452 9995658 10007418 + 102010121 AGCD01044267;GBCE01096097;XM_005395027;XM_005395028 XP_005395084;XP_005395085 MODEL 8989040 protein-coding Efhd1 EF-hand domain family member D1 ENCODES a protein that exhibits calcium ion sensor activity (ortholog); INVOLVED IN neuron projection development (ortholog); regulation of cellular hyperosmotic salinity response (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog); mitochondrial inner membrane (ortholog) NW_004955453 3344919 3378157 - 102004779 AGCD01044657;GBCQ01011819;XM_013519767;XM_013519768 XP_013375221;XP_013375222 MODEL 8823183 pseudo LOC102005232 keratinocyte-associated protein 2-like NW_004955458 7970440 7970901 - 102005232 AGCD01047597 MODEL 8891740 ncrna LOC102022053 uncharacterized LOC102022053 NW_004955459 2657683 2664979 - 102022053 AGCD01047994;GBDF01086385;XR_263008 MODEL 8808000 protein-coding Lrrc8d leucine rich repeat containing 8 VRAC subunit D ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cellular response to osmotic stress (ortholog); cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955423 4237263 4360352 - 102006476 AGCD01023529;AGCD01023530;AGCD01023531;AGCD01023532;AGCD01023533;GBBH01077207;GBDI01223844;XM_013514441 XP_013369895 MODEL 730469271 snorna SNORD59 Small nucleolar RNA SNORD59 8815342 protein-coding Cchcr1 coiled-coil alpha-helical rod protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia areata (ortholog); amphetamine abuse (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955583 979138 989267 - 102025526 AGCD01075876;GBCE01153941;XM_013509809;XM_013509810;XM_013509811;XM_013509812;XM_013509813;XM_013509814;XM_013509815;XM_013509816;XM_013509817;XM_013509818;XM_013509819;XM_013509820 XP_013365263;XP_013365264;XP_013365265;XP_013365266;XP_013365267;XP_013365268;XP_013365269;XP_013365270;XP_013365271;XP_013365272;XP_013365273;XP_013365274 MODEL 39133486 snrna U4 U4 spliceosomal RNA 8954226 pseudo LOC102003435 olfactory receptor 2AG2-like NW_004955414 22564831 22565788 - 102003435 AGCD01015463 MODEL 8974850 protein-coding Coro2a coronin 2A ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN brush border (ortholog); transcription repressor complex (ortholog) NW_004955419 27323164 27386488 + 102018498 AGCD01020430;AGCD01020431;AGCD01020432;GBDJ01015509;XM_005382829;XM_005382831;XM_005382833 XP_005382886;XP_005382888;XP_005382890 MODEL 8787961 protein-coding Ptpa protein phosphatase 2 phosphatase activator ENCODES a protein that exhibits ATP binding (ortholog); phosphatase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Disease Progression (ortholog); FOUND IN ATPase complex (ortholog); calcium channel complex (ortholog); cytoplasm (ortholog) NW_004955570 1429316 1454820 + 102015788 AGCD01074814;GBDI01022159;XM_005413611 XP_005413668 MODEL 8920114 protein-coding Ppp1cc protein phosphatase 1 catalytic subunit gamma ENCODES a protein that exhibits lamin binding (ortholog); phosphatase activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN blastocyst development (ortholog); circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; dopamine signaling pathway; glycogen biosynthetic pathway; ASSOCIATED WITH cervical cancer (ortholog); congestive heart failure (ortholog); lung cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955482 7582605 7605340 - 102026527 AGCD01057477;GBDF01006573;XM_005403165 XP_005403222 MODEL 8713732 protein-coding Calu calumenin ENCODES a protein that exhibits calcium ion binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN peripheral nervous system axon regeneration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955479 9541574 9572189 + 102028748 AGCD01056480;AGCD01056481;AGCD01056482;GBCE01001921;XM_005402382;XM_013503287 XP_005402439;XP_013358741 MODEL 9061084 protein-coding Xkrx XK related X-linked ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955503 7037200 7066070 - 102023378 AGCD01064776;AGCD01064777;AGCD01064778;GBDI01286611;XM_005406943 XP_005407000 MODEL 8877419 protein-coding Chrna10 cholinergic receptor nicotinic alpha 10 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); axon (ortholog); cholinergic synapse (ortholog) NW_004955414 19487840 19495368 - 102018918 AGCD01015320;AGCD01015321;GBBH01148635;XM_005380457 XP_005380514 MODEL 8846268 protein-coding Sik1 salt inducible kinase 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); cAMP response element binding protein binding (ortholog); INVOLVED IN anoikis (ortholog); cardiac muscle cell differentiation (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955407 38739062 38749293 + 102004242 AGCD01007812;GBBH01061904;GBDK01073494;XM_005375790 XP_005375847 MODEL 8864018 protein-coding LOC102012583 putative alpha-1-antitrypsin-related protein NW_004955438 14225509 14229594 + 102012583 AGCD01035332;XM_005390440 XP_005390497 MODEL 8866262 protein-coding Bcdin3d BCDIN3 domain containing RNA methyltransferase ENCODES a protein that exhibits O-methyltransferase activity (ortholog); pre-miRNA binding (ortholog); RNA methyltransferase activity (ortholog); INVOLVED IN negative regulation of pre-miRNA processing (ortholog); pre-miRNA processing (ortholog); tRNA methylation (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955547 427127 432482 - 102007597 AGCD01072154;AGCD01072155;GBDF01280886;XM_005411848 XP_005411905 MODEL 8701516 pseudo LOC102029858 aldo-keto reductase family 1 member B10 pseudogene NW_004955478 10537415 10548336 + 102029858 AGCD01056134 MODEL 10228620 protein-coding LOC106148567 uncharacterized LOC106148567 NW_004955424 14787 32056 + 106148567 AGCD01024165;XM_013514584 XP_013370038 MODEL 39133808 misc_rna 7SK 7SK RNA 8903871 ncrna LOC102006301 uncharacterized LOC102006301 NW_004955450 13203566 13210711 - 102006301 AGCD01042729;GBDF01222682;XR_001235845;XR_001235847;XR_001235848 MODEL 10134223 protein-coding LOC106147477 olfactory receptor 10Q1-like NW_004955567 224383 226341 - 106147477 AGCD01074388;AGCD01074389;XM_013509222 XP_013364676 MODEL 8906269 protein-coding LOC102006686 granulocyte-macrophage colony-stimulating factor receptor subunit alpha NW_004955499 987241 1000290 + 102006686 AGCD01063304;AGCD01063305;GBCE01182198;XM_005406506;XM_005406507 XP_005406563;XP_005406564 MODEL 8892349 protein-coding Tsnare1 t-SNARE domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955454 743022 1203483 - 102020635 AGCD01044960;AGCD01044961;AGCD01044962;AGCD01044963;AGCD01044964;AGCD01044965;GBDF01179211;XM_013520010 XP_013375464 MODEL 8756768 protein-coding Dctn6 dynactin subunit 6 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); mitotic spindle organization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); dynactin complex (ortholog) NW_004955463 6612124 6645962 + 102008201 AGCD01049686;AGCD01049687;AGCD01049688;AGCD01049689;GBBH01229700;GBDF01122568;XM_013521561;XM_013521562 XP_013377015;XP_013377016 MODEL 8882966 protein-coding Elovl5 ELOVL fatty acid elongase 5 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dendritic tree (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955411 2747232 2812544 + 102011288 AGCD01011516;AGCD01011517;AGCD01011518;GBDF01007036;XM_005377606 XP_005377663 MODEL 8866090 protein-coding Rab13 RAB13, member RAS oncogene family ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); G protein activity (ortholog); GTP binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); cellular response to insulin stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog); cytoplasmic vesicle (ortholog) NW_004955545 590021 594191 - 102026260 AGCD01071802;GBDJ01137960;XM_005411465;XM_013508365 XP_005411522;XP_013363819 MODEL 8778194 protein-coding Rgs5 regulator of G protein signaling 5 INVOLVED IN negative regulation of vascular associated smooth muscle cell proliferation (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH colorectal adenocarcinoma (ortholog); essential hypertension (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955462 13228110 13288063 + 102008706 AGCD01049422;AGCD01049423;GBDF01305569;XM_005398257;XM_005398258 XP_005398314;XP_005398315 MODEL 8955140 protein-coding LOC102007827 UDP-glucuronosyltransferase 2B17-like NW_004955447 4402579 4413284 - 102007827 AGCD01040717;GBCB01083295;XM_005392819;XM_013518535 XP_005392876;XP_013373989 MODEL 9060849 protein-coding Sacs sacsin molecular chaperone ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN negative regulation of inclusion body assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); Ataxia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955497 3701515 3752627 - 102016491 AGCD01062552;AGCD01062553;GBCB01097721;GBCE01012315;XM_005406316 XP_005406373 MODEL 39134501 misc_rna 7SK 7SK RNA 8974723 ncrna LOC102009353 uncharacterized LOC102009353 NW_004955408 30404465 30505925 + 102009353 AGCD01008807;AGCD01008808;AGCD01008809;GBDI01286730;XR_001231749;XR_001231750;XR_259727 MODEL 8841048 protein-coding Dgat2l6 diacylglycerol O-acyltransferase 2 like 6 ENCODES a protein that exhibits diacylglycerol O-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955475 9708402 9733712 + 102020004 AGCD01055069;AGCD01055070;AGCD01055071;GBDJ01212951;XM_005401609 XP_005401666 MODEL 8720560 protein-coding Exosc2 exosome component 2 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) NW_004955513 639798 648360 + 102017042 AGCD01066829;GBCE01033210;XM_005408346 XP_005408403 MODEL 8754508 protein-coding LOC102025236 olfactory receptor 11L1-like NW_004955473 3784391 3785317 - 102025236 AGCD01053938;XM_005401295 XP_005401352 MODEL 39131705 rrna 5S_rRNA 5S ribosomal RNA 8724412 protein-coding Cubn cubilin ENCODES a protein that exhibits cargo receptor activity (ortholog); hemoglobin binding (ortholog); identical protein binding (ortholog); INVOLVED IN cobalamin catabolic process (ortholog); cobalamin metabolic process (ortholog); cobalamin transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Albuminuria (ortholog); amphetamine abuse (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955429 10789674 11038297 + 102028666 AGCD01028680;AGCD01028681;AGCD01028682;AGCD01028683;AGCD01028684;AGCD01028685;GBCQ01008980;XM_005386965 XP_005387022 MODEL 8987956 ncrna LOC102025965 uncharacterized LOC102025965 NW_004955613 264675 272999 + 102025965 AGCD01077206;XR_001232578;XR_265171 MODEL 9043286 ncrna LOC102018745 uncharacterized LOC102018745 NW_004955425 3755805 3770222 - 102018745 AGCD01025296;AGCD01025297;GBDF01112248;XR_261124 MODEL 8703756 protein-coding Bche butyrylcholinesterase ENCODES a protein that exhibits acetylcholinesterase activity (ortholog); choline binding (ortholog); cholinesterase activity (ortholog); INVOLVED IN choline metabolic process (ortholog); learning (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN heroin pharmacodynamics pathway; heroin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Acholinesterasemia (ortholog); Alzheimer's disease (ortholog); amnestic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) NW_004955448 15327374 15396827 - 102010751 AGCD01041663;AGCD01041664;GBDJ01278447;JN633046;XM_005393137;XM_005393138;XM_013518684 AEO94791;XP_005393194;XP_005393195;XP_013374138 MODEL 8999372 ncrna LOC102005233 uncharacterized LOC102005233 NW_004955460 10800696 10803686 + 102005233 AGCD01048610;XR_001236511;XR_263052 MODEL 8788869 protein-coding Rap1a RAP1A, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cAMP (ortholog); cellular response to forskolin (ortholog); PARTICIPATES IN adenosine signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); dense core granule (ortholog) NW_004955435 15090521 15171397 + 102028125 AGCD01033262;GBCQ01034816;XM_005388951;XM_013516528;XM_013516529 XP_005389008;XP_013371982;XP_013371983 MODEL 9018015 protein-coding Foxj3 forkhead box J3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male meiosis I (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955537 1816431 1936380 - 102008890 AGCD01070905;AGCD01070906;GBCB01042216;XM_005410594;XM_005410595;XM_013507784;XM_013507785;XM_013507786;XM_013507787 XP_005410651;XP_005410652;XP_013363238;XP_013363239;XP_013363240;XP_013363241 MODEL 8804555 protein-coding LOC102022056 olfactory receptor 49 NW_004955409 37608279 37609402 - 102022056 AGCD01010531;XM_005377185 XP_005377242 MODEL 8984666 protein-coding Slc22a20 solute carrier family 22 member 20 NW_004955422 19979250 20005115 - 102013181 AGCD01023052;AGCD01023053;AGCD01023054;AGCD01023055;AGCD01023056;AGCD01023057;GBDF01294741;XM_005384507 XP_005384564 MODEL 10220772 pseudo LOC102011300 Ig heavy chain V-I region 5-like NW_004955470 472783 473374 - 102011300 AGCD01052614 MODEL 9027800 protein-coding Tafa5 TAFA chemokine like family member 5 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of vascular associated smooth muscle cell migration (ortholog); negative regulation of vascular associated smooth muscle cell proliferation (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955413 32094438 32200276 + 102015305 AGCD01014637;AGCD01014638;GBCE01064957;GBDJ01030688;XM_005379522;XM_013511696 XP_005379579;XP_013367150 MODEL 39132364 rrna 5S_rRNA 5S ribosomal RNA 8901481 protein-coding LOC102012975 keratin-associated protein 5-5-like NW_004955422 13414755 13423735 - 102012975 AGCD01022823;AGCD01022824;AGCD01022825;XM_013513832 XP_013369286 MODEL 8711416 protein-coding Ppp1r10 protein phosphatase 1 regulatory subunit 10 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase 1 binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); negative regulation of mitotic DNA damage checkpoint (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955583 621380 635595 - 102016764 AGCD01075842;AGCD01075843;GBBH01092539;XM_005414310;XM_005414312;XM_005414313;XM_013509798 XP_005414367;XP_005414369;XP_005414370;XP_013365252 MODEL 8848508 protein-coding Coro2b coronin 2B ENCODES a protein that exhibits talin binding (ortholog); vinculin binding (ortholog); INVOLVED IN focal adhesion assembly (ortholog); negative regulation of cell-substrate adhesion (ortholog); negative regulation of establishment of protein localization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN focal adhesion (ortholog) NW_004955450 7522447 7573043 - 102020179 AGCD01042540;AGCD01042541;GBDJ01228574;XM_005393673;XM_005393674 XP_005393730;XP_005393731 MODEL 8928062 protein-coding Dusp5 dual specificity phosphatase 5 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of vasoconstriction (ortholog); positive regulation of cerebral blood circulation (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Brain Injuries (ortholog); Cardiac Fibrosis (ortholog) NW_004955485 914250 927640 - 102016273 AGCD01058466;AGCD01058467;GBBH01223883;GBDF01144994;XM_013504121 XP_013359575 MODEL 9041896 protein-coding Arl8b ARF like GTPase 8B ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); G protein activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); antigen processing and presentation following phagocytosis (ortholog); antigen processing and presentation of polysaccharide antigen via MHC class II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); cytolytic granule membrane (ortholog); cytoplasm (ortholog) NW_004955421 8231337 8276907 - 102017131 AGCD01021801;AGCD01021802;AGCD01021803;AGCD01021804;GBBH01228154;GBCQ01069271;XM_013513729 XP_013369183 MODEL 8945064 protein-coding Chrna2 cholinergic receptor nicotinic alpha 2 subunit ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cellular response to nicotine (ortholog); cerebral cortex GABAergic interneuron development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH asthma (ortholog); autosomal dominant nocturnal frontal lobe epilepsy (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 4 (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell periphery (ortholog); neuron projection cytoplasm (ortholog) NW_004955403 49970398 49989095 - 102005096 AGCD01002953;XM_013514203 XP_013369657 MODEL 9036914 pseudo LOC102009355 transcription elongation factor B polypeptide 1 pseudogene NW_004955459 15151409 15153569 + 102009355 AGCD01048312 MODEL 8906165 protein-coding LOC102029861 uncharacterized LOC102029861 NW_004955417 30998080 31011050 - 102029861 AGCD01018637;GBCB01028634;XM_005381968;XM_013512782;XM_013512783;XM_013512784 XP_005382025;XP_013368236;XP_013368237;XP_013368238 MODEL 8789331 protein-coding Efhd2 EF-hand domain family member D2 ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); calcium ion sensor activity (ortholog); INVOLVED IN actin crosslink formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Binge Drinking (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN lamellipodium (ortholog) NW_004955527 2724607 2739324 - 102013754 AGCD01069464;GBBH01060768;XM_005409875 XP_005409932 MODEL 9047727 protein-coding Tiparp TCDD inducible poly(ADP-ribose) polymerase ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); face morphogenesis (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955448 7687668 7716481 + 102019653 AGCD01041422;GBDF01125248;XM_005393080 XP_005393137 MODEL 8740709 pseudo LOC102024147 laccase domain-containing protein 1-like NW_004955509 6401840 6403071 + 102024147 AGCD01066121 MODEL 39133809 misc_rna 7SK 7SK RNA 8996269 pseudo LOC102003803 calmodulin-like NW_004955437 19660488 19661153 + 102003803 AGCD01034865 MODEL 8926583 protein-coding LOC102006303 basic salivary proline-rich protein 4-like NW_004955451 12633382 12651062 - 102006303 AGCD01043417;GBCQ01011558;XM_005394240;XR_001235989 XP_005394297 MODEL 8762757 pseudo LOC102006688 actin-related protein 2/3 complex subunit 1A pseudogene NW_004955426 11475451 11481911 - 102006688 AGCD01026317 MODEL 8990865 protein-coding Ccin calicin INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 91 (ortholog); FOUND IN cytoskeletal calyx (ortholog); perinuclear theca (ortholog); sperm glycocalyx (ortholog) NW_004958151 6 1111 + 102012493 AGCD01081547;GBDF01128060;GBDK01343189;XM_005415237 XP_005415294 MODEL 39133487 snrna U4 U4 spliceosomal RNA 8765317 protein-coding Polr1b RNA polymerase I subunit B ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN embryo implantation (ortholog); nucleologenesis (ortholog); rRNA transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955470 1714156 1737749 - 102026311 AGCD01052653;AGCD01052654;GBDI01296356;XM_005400601;XM_005400604 XP_005400658;XP_005400661 MODEL 9000006 protein-coding Caly calcyon neuron specific vesicular protein ENCODES a protein that exhibits clathrin light chain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); clathrin coat assembly (ortholog); positive regulation of clathrin coat assembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); attention deficit hyperactivity disorder (ortholog); essential hypertension (ortholog); FOUND IN axon (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) NW_004955477 10983602 10993371 - 102003652 AGCD01055712;AGCD01055713;GBCE01072507;GBDF01305094;XM_013503059 XP_013358513 MODEL 8821153 protein-coding LOC102010524 protein S100-A6-like NW_004955545 107981 108711 - 102010524 AGCD01071767;XM_005411404 XP_005411461 MODEL 730469297 snorna SNORA54 Small nucleolar RNA SNORA54 8837689 protein-coding Xpa XPA, DNA damage recognition and repair factor ENCODES a protein that exhibits damaged DNA binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA repair (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); multicellular organism growth (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); DNA replication factor A complex (ortholog); nuclear body (ortholog) NW_004955419 27751042 27774917 + 102023038 AGCD01020448;GBDJ01229564;XM_005382841;XR_260670 XP_005382898 MODEL 8953899 protein-coding Rab14 RAB14, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN apical protein localization (ortholog); body fluid secretion (ortholog); early endosome to Golgi transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN alveolar lamellar body (ortholog); apical plasma membrane (ortholog); cilium (ortholog) NW_004955419 6790110 6812870 + 102018832 AGCD01019864;AGCD01019865;GBDF01058003;XM_005382571;XM_005382572 XP_005382628;XP_005382629 MODEL 8721643 protein-coding Rgs6 regulator of G protein signaling 6 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); lung cancer (ortholog); morphine dependence (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955523 2763143 3366851 - 102004846 AGCD01068588;AGCD01068589;AGCD01068590;AGCD01068591;AGCD01068592;AGCD01068593;AGCD01068594;AGCD01068595;AGCD01068596;AGCD01068597;AGCD01068598;AGCD01068599;AGCD01068600;AGCD01068601;AGCD01068602;AGCD01068603;AGCD01068604;AGCD01068605;GBDJ01403741;XM_005409440;XM_005409442;XM_005409443;XM_013507178 XP_005409497;XP_005409499;XP_005409500;XP_013362632 MODEL 10094501 pseudo LOC106148568 RNA exonuclease 1 homolog pseudogene NW_004955424 57495 58910 - 106148568 AGCD01024165 MODEL 730469484 snorna SNORD59 Small nucleolar RNA SNORD59 9041564 protein-coding LOC102005577 uncharacterized LOC102005577 NW_004955465 13237704 13244781 + 102005577 AGCD01050593;GBCE01177470;XM_013521808 XP_013377262 MODEL 10127670 pseudo LOC106147478 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1251305 1263909 - 106147478 AGCD01074465 MODEL 9018792 protein-coding Ints6 integrator complex subunit 6 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN dendritic spine morphogenesis (ortholog); protein localization to chromatin (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 78 (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); INTAC complex (ortholog) NW_004955431 4728011 4810236 - 102013324 AGCD01030007;AGCD01030008;AGCD01030009;AGCD01030010;AGCD01030011;GBBH01107233;GBCQ01151782;XM_013515760 XP_013371214 MODEL 8740818 pseudo LOC102003437 probable asparagine--tRNA ligase, mitochondrial pseudogene NW_004955414 18585477 18586305 + 102003437 AGCD01015285 MODEL 8942136 protein-coding Cuedc1 CUE domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955451 5054633 5124318 + 102005764 AGCD01043162;AGCD01043163;GBCB01001214;XM_005394044;XM_005394045;XM_005394046 XP_005394101;XP_005394102;XP_005394103 MODEL 8782665 pseudo LOC102005234 tRNA pseudouridine(38/39) synthase pseudogene NW_004955409 17845827 17846565 - 102005234 AGCD01009800 MODEL 8853212 pseudo LOC102029863 E3 SUMO-protein ligase PIAS1 pseudogene NW_004955482 8331021 8334222 + 102029863 AGCD01057515 MODEL 8820164 pseudo LOC102003804 thyrotropin-releasing hormone receptor-like NW_004955541 2505471 2509425 - 102003804 AGCD01071413 MODEL 9026268 protein-coding Elovl6 ELOVL fatty acid elongase 6 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fatty acid elongase complex (ortholog) NW_004955496 179634 301908 + 102022717 AGCD01062223;AGCD01062224;AGCD01062225;GBCQ01134913;XM_005406181;XM_005406182;XM_013505419 XP_005406238;XP_005406239;XP_013360873 MODEL 8874983 protein-coding Ptpdc1 protein tyrosine phosphatase domain containing 1 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955515 3912495 4044999 + 102021161 AGCD01067307;AGCD01067308;AGCD01067309;AGCD01067310;AGCD01067311;AGCD01067312;AGCD01067313;GBDF01081967;XM_005408888;XM_005408890;XM_005408891;XM_005408892;XM_005408894 XP_005408945;XP_005408947;XP_005408948;XP_005408949;XP_005408951 MODEL 8804840 protein-coding Rap1b RAP1B, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell population proliferation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); cytosol (ortholog) NW_004955458 15110709 15121868 + 102005445 AGCD01047864;GBDK01005189;XM_013520897 XP_013376351 MODEL 8892859 protein-coding Cck cholecystokinin ENCODES a protein that exhibits hormone activity (ortholog); neuropeptide hormone activity (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); axonogenesis (ortholog); cholecystokinin signaling pathway (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); alcohol dependence (ortholog); Alcohol Withdrawal Delirium (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); axon initial segment (ortholog) NW_004955420 28438806 28443458 + 102003245 AGCD01021477;AGCD01021478;GBDF01050844;XM_005383549 XP_005383606 MODEL 8830654 protein-coding LOC102011301 olfactory receptor 56B1-like NW_004955414 21711391 21712350 + 102011301 AGCD01015429;XM_005380104 XP_005380161 MODEL 8765735 pseudo LOC102012585 cytochrome c oxidase protein 20 homolog pseudogene NW_004955441 6084988 6089834 + 102012585 AGCD01036899;XM_005391041 MODEL 39132370 rrna 5S_rRNA 5S ribosomal RNA 8740610 protein-coding Lrrc8e leucine rich repeat containing 8 VRAC subunit E ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cell volume homeostasis (ortholog); cellular response to osmotic stress (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) NW_004955563 1362266 1370221 - 102020297 AGCD01074144;GBDK01117974;XM_005413146;XM_005413147;XM_013509174 XP_005413203;XP_005413204;XP_013364628 MODEL 8981707 protein-coding Dgcr2 DiGeorge syndrome critical region gene 2 INVOLVED IN cognition (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN membrane (ortholog) NW_004955442 18857222 18938552 + 102013222 AGCD01038022;AGCD01038023;AGCD01038024;GBDF01052698;XM_005391789;XM_005391790;XM_005391791;XM_005391792 XP_005391846;XP_005391847;XP_005391848;XP_005391849 MODEL 8733326 protein-coding Exosc3 exosome component 3 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN CUT catabolic process (ortholog); DNA deamination (ortholog); isotype switching (ortholog); ASSOCIATED WITH cerebellar hypoplasia (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog) NW_004955419 28683896 28692006 + 102028969 AGCD01020473;GBCQ01174458;XM_005382860 XP_005382917 MODEL 8914562 protein-coding Sae1 SUMO1 activating enzyme subunit 1 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); protein heterodimerization activity (ortholog); small protein activating enzyme binding (ortholog); INVOLVED IN positive regulation of protein localization to mitochondrion (ortholog); positive regulation of protein sumoylation (ortholog); protein sumoylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); SUMO activating enzyme complex (ortholog) NW_004955574 1090446 1158266 + 102005089 AGCD01075153;AGCD01075154;AGCD01075155;AGCD01075156;AGCD01075157;AGCD01075158;GBDF01002543;XM_005413849 XP_005413906 MODEL 8973994 protein-coding Ppp1r11 protein phosphatase 1 regulatory inhibitor subunit 11 ENCODES a protein that exhibits phosphatase binding (ortholog); protein phosphatase inhibitor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cytokine production (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955583 198233 201312 + 102011259 AGCD01075802;GBDF01007793;XM_005414297 XP_005414354 MODEL 8735828 protein-coding Dctpp1 dCTP pyrophosphatase 1 ENCODES a protein that exhibits dCTP diphosphatase activity (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN dCTP catabolic process (ortholog); DNA protection (ortholog); dTTP catabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955493 7357204 7360034 - 102018841 AGCD01061183;GBDF01090247;XM_005405348 XP_005405405 MODEL 9050514 protein-coding Dusp6 dual specificity phosphatase 6 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); brain ischemia (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955405 26662018 26666314 - 102014004 AGCD01005204;GBDK01000937;XM_005374434 XP_005374491 MODEL 8995565 protein-coding Coro6 coronin 6 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog) NW_004955481 3636287 3644330 + 102007013 AGCD01056909;GBDI01211250;XM_005402667;XM_005402668;XM_005402669;XM_005402670 XP_005402724;XP_005402725;XP_005402726;XP_005402727 MODEL 8862851 protein-coding Tsnax translin associated factor X ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); protein-containing complex binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN mitotic DNA damage checkpoint signaling (ortholog); RISC complex assembly (ortholog); siRNA processing (ortholog); FOUND IN cytoplasm (ortholog); endoribonuclease complex (ortholog); nucleoplasm (ortholog) NW_004955492 7304982 7335512 - 102006784 AGCD01060784;AGCD01060785;AGCD01060786;GBDF01124616;XM_005404969;XM_013504735 XP_005405026;XP_013360189 MODEL 8944742 protein-coding Bckdha branched chain keto acid dehydrogenase E1 subunit alpha ENCODES a protein that exhibits branched-chain 2-oxo acid dehydrogenase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); L-isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH esophageal cancer (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955555 334253 357417 + 102017818 AGCD01073024;GBDF01080285;XM_005412348;XM_005412349 XP_005412405;XP_005412406 MODEL 8858927 protein-coding LOC102024148 olfactory receptor 1020 NW_004955511 1745965 1747014 - 102024148 AGCD01066378;XM_005408241 XP_005408298 MODEL 8965816 ncrna LOC102006305 uncharacterized LOC102006305 NW_004955404 24896406 24991834 - 102006305 AGCD01003836;AGCD01003837;AGCD01003838;AGCD01003839;AGCD01003840;GBDF01084048;XR_001235103;XR_001235104 MODEL 10187389 protein-coding LOC106147479 proline-rich protein 2-like NW_004955567 1865294 1866342 + 106147479 AGCD01074496;GBDF01087157;XM_013509235 XP_013364689 MODEL 8863519 protein-coding Slc22a23 solute carrier family 22 member 23 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955465 9840017 10006114 + 102024102 AGCD01050496;AGCD01050497;AGCD01050498;GBBH01214447;GBDF01050917;XM_005398990;XR_001236751;XR_001236752 XP_005399047 MODEL 8765904 protein-coding Sik2 salt inducible kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); nucleus (ortholog) NW_004955412 13342032 13458076 + 102017966 AGCD01012833;AGCD01012834;AGCD01012835;AGCD01012836;GBCB01023497;GBDK01238669;XM_005378076 XP_005378133 MODEL 39134502 misc_rna 7SK 7SK RNA 9031553 protein-coding Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); INVOLVED IN cardiolipin acyl-chain remodeling (ortholog); cardiolipin metabolic process (ortholog); cristae formation (ortholog); PARTICIPATES IN cardiolipin metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Barth syndrome (ortholog); cardiomyopathy (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955580 915668 921703 + 102029680 AGCD01075630;GBCQ01125460;XM_005414194;XR_001232478 XP_005414251 MODEL 8939787 pseudo LOC102025240 ATP-binding cassette sub-family A member 8-B-like NW_004955478 3891326 3947184 + 102025240 AGCD01055834;AGCD01055835;AGCD01055836;XM_005402290 MODEL 8833039 protein-coding LOC102012976 guanylate-binding protein 6 NW_004955423 5080353 5100169 - 102012976 AGCD01023554;AGCD01023555;GBCQ01164165;XM_005385101;XM_005385102;XM_005385103 XP_005385158;XP_005385159;XP_005385160 MODEL 8919698 protein-coding Chrna3 cholinergic receptor nicotinic alpha 3 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral response to nicotine (ortholog); excitatory postsynaptic potential (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; nicotine pharmacodynamics pathway; nicotine pharmacokinetics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) NW_004955450 979630 1011316 - 102011926 AGCD01042346;AGCD01042347;AGCD01042348;AGCD01042349;GBBH01004760;XM_005393455 XP_005393512 MODEL 8811702 protein-coding LOC102025966 nucleoside diphosphate kinase A ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); acetyl-CoA binding (ortholog); ADP binding (ortholog); INVOLVED IN acetyl-CoA catabolic process (ortholog); apoptotic DNA fragmentation (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; de novo pyrimidine biosynthetic pathway; E-cadherin signaling pathway; ASSOCIATED WITH breast cancer (ortholog); breast carcinoma (ortholog); Cardiomegaly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 10737976 10744261 - 102025966 AGCD01043330;GBDF01082596;GBDF01082598;XM_013519278 XP_013374732 MODEL 39133810 misc_rna 7SK 7SK RNA 8845450 protein-coding Tipin TIMELESS interacting protein INVOLVED IN cell cycle phase transition (ortholog); DNA damage checkpoint signaling (ortholog); DNA replication checkpoint signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955450 9259838 9279479 + 102029924 AGCD01042589;GBDF01222347;XM_005415299;XM_013518980 XP_005415356;XP_013374434 MODEL 8805941 ncrna LOC102022060 uncharacterized LOC102022060 NW_004955464 3304287 3323290 - 102022060 AGCD01049973;GBCB01109756;XR_001236673 MODEL 8734106 ncrna LOC102006691 uncharacterized LOC102006691 NW_004955506 1675374 1677648 - 102006691 AGCD01065272;GBDI01279025;XR_264324 MODEL 8885985 protein-coding Ints6l integrator complex subunit 6 like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955489 9192428 9224445 - 102024241 AGCD01060031;GBBH01051174;XM_013504487;XM_013504488;XM_013504489 XP_013359941;XP_013359942;XP_013359943 MODEL 8764207 protein-coding LOC102005239 vomeronasal type-1 receptor 4-like NW_004955465 13086650 13087604 + 102005239 AGCD01050584;XM_005398946 XP_005399003 MODEL 8863270 protein-coding Polr1c RNA polymerase I and III subunit C INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955437 9346397 9350591 + 102011146 AGCD01034527;GBDJ01006305;XM_005389779 XP_005389836 MODEL 8857570 ncrna LOC102010525 uncharacterized LOC102010525 NW_004955440 3346013 3352979 + 102010525 AGCD01036240;GBBH01169042;XR_262002 MODEL 8763459 protein-coding Ptpmt1 protein tyrosine phosphatase mitochondrial 1 ENCODES a protein that exhibits phosphatidylglycerophosphatase activity (ortholog); phosphatidylinositol-5-phosphate phosphatase activity (ortholog); INVOLVED IN cardiolipin biosynthetic process (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; inositol metabolic pathway; ASSOCIATED WITH Neurodevelopmental disorder with ataxia and brain abnormalities (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955422 723236 724761 - 102007132 AGCD01022432;GBBH01076389;GBCQ01018067;XM_005384942 XP_005384999 MODEL 8935443 protein-coding Xpc XPC complex subunit, DNA damage recognition and repair factor ENCODES a protein that exhibits damaged DNA binding (ortholog); DNA damage sensor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); mitotic intra-S DNA damage checkpoint signaling (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); amino acid metabolic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955429 16935901 16968285 - 102023284 AGCD01028842;AGCD01028843;GBBH01000085;GBCQ01035510;XM_005387261 XP_005387318 MODEL 8855148 protein-coding Elovl7 ELOVL fatty acid elongase 7 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); very long-chain fatty acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955446 7732291 7758842 + 102005647 AGCD01040128;AGCD01040129;GBDF01215158;XM_013518450;XM_013518451 XP_013373904;XP_013373905 MODEL 39132376 rrna 5S_rRNA 5S ribosomal RNA 8799074 ncrna LOC102009360 uncharacterized LOC102009360 NW_004955410 29294602 29317106 + 102009360 AGCD01011281;AGCD01011282;GBCQ01057489;XR_001232714 MODEL 8766958 ncrna LOC102012592 uncharacterized LOC102012592 NW_004955583 223012 224427 - 102012592 AGCD01075806;GBDF01221589;XR_001232492 MODEL 8725642 protein-coding Rgs7 regulator of G protein signaling 7 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); positive regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); Experimental Seizures (ortholog); FOUND IN cell tip (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 10669127 11127564 + 102019356 AGCD01005869;AGCD01005870;AGCD01005871;AGCD01005872;AGCD01005873;AGCD01005874;AGCD01005875;AGCD01005876;AGCD01005877;AGCD01005878;AGCD01005879;AGCD01005880;AGCD01005881;AGCD01005882;GBCE01084812;GBCE01084814;XM_005374822;XM_005374823;XM_005374824;XM_005374825;XM_005374826;XM_013520541;XM_013520556 XP_005374879;XP_005374880;XP_005374881;XP_005374882;XP_005374883;XP_013375995;XP_013376010 MODEL 730469177 snorna SNORD59 Small nucleolar RNA SNORD59 8792267 protein-coding Lrrcc1 leucine rich repeat and coiled-coil centrosomal protein 1 ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955417 3082821 3115136 + 102029623 AGCD01017904;GBDF01044023;XM_005381735;XM_005381737;XM_005381738;XM_013512797;XM_013512798 XP_005381792;XP_005381794;XP_005381795;XP_013368251;XP_013368252 MODEL 8835037 protein-coding Efl1 elongation factor like GTPase 1 ENCODES a protein that exhibits GTPase activity (ortholog); ribosome binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); GTP metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); astigmatism (ortholog); Breast Cancer, Familial (ortholog) NW_004955416 12658177 12789657 - 102028855 AGCD01017212;GBDI01255378;XM_005381460;XM_005381461;XM_013512538 XP_005381517;XP_005381518;XP_013367992 MODEL 39133488 snrna U4 U4 spliceosomal RNA 9024722 protein-coding Foxk1 forkhead box K1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); intracellular glucose homeostasis (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955460 11011498 11067443 - 102008069 AGCD01048626;AGCD01048627;GBDJ01313582;GBDK01137473;XM_005397856 XP_005397913 MODEL 8800471 protein-coding LOC102007836 uncharacterized LOC102007836 NW_004955599 462585 469137 + 102007836 AGCD01076650;AGCD01076651;GBDJ01147444;XM_005414765;XR_265153 XP_005414822 MODEL 8790765 protein-coding Exosc4 exosome component 4 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA deamination (ortholog); histone mRNA catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955454 2732308 2734398 + 102021305 AGCD01045029;GBDF01053020;XM_005395841;XM_005395842 XP_005395898;XP_005395899 MODEL 8851310 ncrna LOC102003439 uncharacterized LOC102003439 NW_004955415 12033874 12040445 - 102003439 AGCD01016183;GBDF01015290;XR_001233199 MODEL 39133811 misc_rna 7SK 7SK RNA 8965817 protein-coding Camk1 calcium/calmodulin dependent protein kinase I ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); nucleocytoplasmic transport (ortholog); positive regulation of dendritic spine development (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955561 1282970 1292710 - 102007710 AGCD01073845;AGCD01073846;GBBH01141570;GBDF01058161;XM_013509086 XP_013364540 MODEL 8858720 protein-coding Cuedc2 CUE domain containing 2 INVOLVED IN intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of macrophage cytokine production (ortholog); ASSOCIATED WITH melanoma (ortholog); Mesothelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955485 7969389 7977073 + 102016480 AGCD01058684;GBDF01047348;XM_005403837;XM_005403838;XM_005403839;XM_005403840 XP_005403894;XP_005403895;XP_005403896;XP_005403897 MODEL 8844224 ncrna LOC102018746 uncharacterized LOC102018746 NW_004955426 16039687 16052875 + 102018746 AGCD01026457;AGCD01026458;AGCD01026459;GBDF01075223;XR_261198 MODEL 10256821 ncrna LOC106147480 uncharacterized LOC106147480 NW_004955567 18679 19665 - 106147480 AGCD01074372;GBCE01161374;XR_001232400;XR_001232401 MODEL 9052570 protein-coding Arl9 ARF like GTPase 9 ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955447 14500696 14515286 - 102006841 AGCD01041007;AGCD01041008;AGCD01041009;AGCD01041010;GBDF01010415;GBDK01356160;XM_013518501;XM_013518502 XP_013373955;XP_013373956 MODEL 10065038 ncrna LOC106148569 uncharacterized LOC106148569 NW_004955403 53621582 53628057 - 106148569 AGCD01003067;GBDJ01162974;XR_001234141 MODEL 8849354 protein-coding Sik3 SIK family kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cartilage development involved in endochondral bone morphogenesis (ortholog); endochondral ossification (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955412 18177175 18280687 - 102023676 AGCD01012927;AGCD01012928;AGCD01012929;GBDK01233303;XM_005378194;XM_013511104;XM_013511105;XM_013511106;XM_013511107;XM_013511108 XP_005378251;XP_013366558;XP_013366559;XP_013366560;XP_013366561;XP_013366562 MODEL 8757824 protein-coding Rab15 RAB15, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN positive regulation of regulated secretory pathway (ortholog); receptor-mediated endocytosis (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) NW_004955466 4958414 4981464 + 102025224 AGCD01050864;GBBH01091286;XM_005399114;XR_001236781 XP_005399171 MODEL 8731061 protein-coding Cckar cholecystokinin A receptor ENCODES a protein that exhibits cholecystokinin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); axonogenesis (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); cholelithiasis (ortholog); Gallbladder Neoplasms (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955443 18738029 18748684 + 102017071 AGCD01038609;GBDI01035734;XM_005392028 XP_005392085 MODEL 9025581 protein-coding Rap1gap RAP1 GTPase activating protein ENCODES a protein that exhibits GTPase activator activity (ortholog); protein homodimerization activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to glial cell derived neurotrophic factor (ortholog); negative regulation of microvillus assembly (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955452 1886557 1950942 - 102029817 AGCD01043869;AGCD01043870;GBDI01071245;XM_013519605;XM_013519606;XM_013519607;XR_001236073;XR_001236074;XR_001236075;XR_001236076;XR_001236077;XR_001236078;XR_001236079;XR_001236080 XP_013375059;XP_013375060;XP_013375061 MODEL 8757033 protein-coding Dcun1d1 defective in cullin neddylation 1 domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); regulation of protein neddylation (ortholog); regulation of protein ubiquitination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); ubiquitin ligase complex (ortholog) NW_004955420 11706649 11747471 - 102022502 AGCD01020830;AGCD01020831;AGCD01020832;GBBH01149746;GBDF01296186;XM_013513568 XP_013369022 MODEL 8880750 protein-coding Dgcr6l DiGeorge syndrome critical region gene 6 like ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 17810570 17815905 + 102020386 AGCD01037986;GBDF01004537;XM_005391720 XP_005391777 MODEL 8864422 protein-coding Safb scaffold attachment factor B ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); hormone metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN midbody (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 3743673 3775073 - 102026440 AGCD01061879;GBDK01009759;XM_005405765;XM_005405766 XP_005405822;XP_005405823 MODEL 8836712 pseudo LOC102005578 Y+L amino acid transporter 2 pseudogene NW_004955466 2383953 2385889 - 102005578 AGCD01050736 MODEL 8807676 protein-coding Ppp1r12a protein phosphatase 1 regulatory subunit 12A ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); enzyme inhibitor activity (ortholog); phosphatase regulator activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); centrosome cycle (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN A band (ortholog); actin cytoskeleton (ortholog); centrosome (ortholog) NW_004955405 18594191 18727345 - 102019767 AGCD01005022;AGCD01005023;AGCD01005024;AGCD01005025;GBDJ01073959;XM_005374361;XM_005374363;XM_013517866;XM_013517875;XM_013517877;XM_013517885;XM_013517896;XM_013517904;XM_013517907 XP_005374418;XP_005374420;XP_013373320;XP_013373329;XP_013373331;XP_013373339;XP_013373350;XP_013373358;XP_013373361 MODEL 8725381 protein-coding Coro7 coronin 7 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin filament polymerization (ortholog); cell migration (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); trans-Golgi network (ortholog) NW_004955442 13010032 13084897 + 102011815 AGCD01037753;AGCD01037754;AGCD01037755;AGCD01037756;AGCD01037757;GBDF01086615;XM_005391296;XM_005391297;XM_005391298 XP_005391353;XP_005391354;XP_005391355 MODEL 8704724 protein-coding Tsnaxip1 translin associated factor X interacting protein 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955484 8868022 8889089 - 102024010 AGCD01058398;AGCD01058399;AGCD01058400;GBDK01187927;XM_005403624;XM_005403625;XM_013503887;XM_013503888 XP_005403681;XP_005403682;XP_013359341;XP_013359342 MODEL 616940646 snorna SNORA55 Small nucleolar RNA SNORA55 8702178 ncrna LOC102003807 uncharacterized LOC102003807 NW_004955546 1036841 1042659 - 102003807 AGCD01072038;GBDF01208163;XR_264887 MODEL 8797188 ncrna LOC102024149 uncharacterized LOC102024149 NW_004955431 15828867 15848471 - 102024149 AGCD01030364;GBDF01014760;XR_001234583;XR_261480 MODEL 39131706 rrna 5S_rRNA 5S ribosomal RNA 39134503 misc_rna 7SK 7SK RNA 8777635 pseudo LOC102011308 protein slowmo homolog 2 pseudogene NW_004955415 30282254 30283847 + 102011308 AGCD01016660 MODEL 9058472 protein-coding LOC102006693 cytochrome P450 2C26-like NW_004955507 1438970 1475012 + 102006693 AGCD01065558;AGCD01065559;AGCD01065560;AGCD01065561;GBDJ01058629;XM_013506234 XP_013361688 MODEL 8744866 protein-coding Slc22a3 solute carrier family 22 member 3 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); dopamine:sodium symporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); INVOLVED IN catecholamine uptake (ortholog); cellular detoxification (ortholog); choline transport (ortholog); PARTICIPATES IN lamivudine pharmacokinetics pathway; metformin pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Coxsackievirus Infections (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); endomembrane system (ortholog) NW_004955439 20367324 20476891 - 102012365 AGCD01036111;AGCD01036112;AGCD01036113;AGCD01036114;GBBH01205688;GBDJ01352885;XM_005390702 XP_005390759 MODEL 9015682 ncrna LOC102010530 uncharacterized LOC102010530 NW_004955446 355157 517018 + 102010530 AGCD01039940;AGCD01039941;AGCD01039942;AGCD01039943;AGCD01039944;GBDF01235331;XR_001235683;XR_262362 MODEL 8961815 protein-coding Tagap T cell activation RhoGTPase activating protein INVOLVED IN defense response to virus (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Crohn's disease (ortholog); lymphoma (ortholog) NW_004955439 3479041 3488403 + 102009422 AGCD01035678;GBCB01086817;XM_005390512 XP_005390569 MODEL 8920441 ncrna LOC102012977 uncharacterized LOC102012977 NW_004955495 5748410 5760737 - 102012977 AGCD01062024;AGCD01062025;AGCD01062026;GBCB01002782;XR_001231365 MODEL 8951897 protein-coding Ptpn1 protein tyrosine phosphatase non-receptor type 1 ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to angiotensin (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); Breast Cancer, Familial (ortholog); Calcification of Aortic Valve (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); early endosome (ortholog) NW_004955445 7754313 7819229 - 102025630 AGCD01039551;AGCD01039552;GBDF01190580;XM_005392314;XM_005392315;XM_005392316 XP_005392371;XP_005392372;XP_005392373 MODEL 8982726 ncrna LOC102025967 uncharacterized LOC102025967 NW_004955915 4732 10513 - 102025967 AGCD01078662;GBDF01188258;XR_265196 MODEL 8744555 protein-coding Dusp7 dual specificity phosphatase 7 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955532 3685137 3691933 - 102026152 AGCD01070294;GBCB01023261;GBCE01096661;XM_005410343 XP_005410400 MODEL 8728142 protein-coding Bckdhb branched chain keto acid dehydrogenase E1 subunit beta ENCODES a protein that exhibits branched-chain 2-oxo acid dehydrogenase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); L-isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Developmental Disabilities (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955411 8427875 8626564 + 102008389 AGCD01011729;AGCD01011730;AGCD01011731;AGCD01011732;GBBH01117792;GBDK01235567;XM_005377677 XP_005377734 MODEL 8941654 protein-coding Chrna4 cholinergic receptor nicotinic alpha 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); B cell activation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) NW_004955528 825314 840994 + 102015046 AGCD01069547;GBDJ01273817;XM_005409981 XP_005410038 MODEL 730469130 snorna SNORD60 Small nucleolar RNA SNORD60 8797232 protein-coding Lrrd1 leucine rich repeats and death domain containing 1 NW_004955432 9132229 9166690 - 102027442 AGCD01030894;AGCD01030895;AGCD01030896;AGCD01030897;AGCD01030898;GBDF01082957;XM_013515909;XM_013515910 XP_013371363;XP_013371364 MODEL 8703293 protein-coding Rgs7bp regulator of G protein signaling 7 binding protein INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of postsynaptic membrane potential (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendritic shaft (ortholog) NW_004955446 4354689 4451269 - 102022648 AGCD01040034;AGCD01040035;AGCD01040036;AGCD01040037;GBDJ01301600;XM_005392636 XP_005392693 MODEL 8830388 protein-coding LOC102029866 C-C chemokine receptor type 1-like NW_004955420 25925770 25927905 + 102029866 AGCD01021383;GBDK01319325;XM_005383456 XP_005383513 MODEL 8792324 pseudo LOC102007837 28S ribosomal protein S31, mitochondrial pseudogene NW_004955402 45114932 45115802 - 102007837 AGCD01001130 MODEL 8708122 protein-coding Efna1 ephrin A1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); endocardial cushion to mesenchymal transition involved in heart valve formation (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; hypoxia inducible factor pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); focal adhesion (ortholog); plasma membrane (ortholog) NW_004955545 1610929 1617217 + 102025845 AGCD01071863;GBBH01228706;XM_005411571 XP_005411628 MODEL 8965782 protein-coding Dcun1d2 defective in cullin neddylation 1 domain containing 2 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); regulation of protein neddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955404 463238 491385 + 102002986 AGCD01003202;GBDI01220195;XM_005373939;XM_005373940;XM_005373941;XM_013515539;XM_013515541;XM_013515553 XP_005373996;XP_005373997;XP_005373998;XP_013370993;XP_013370995;XP_013371007 MODEL 8967541 protein-coding Cort cortistatin ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); regulation of circadian sleep/wake cycle, sleep (ortholog); ASSOCIATED WITH brain infarction (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 3152745 3154956 - 102016059 AGCD01059018;GBDI01244129;XM_005404018 XP_005404075 MODEL 626189143 snorna SNORA57 Small nucleolar RNA SNORA57 8886991 ncrna LOC102005243 uncharacterized LOC102005243 NW_004955467 11763835 11774999 + 102005243 AGCD01051617;GBDF01234200;XR_263363 MODEL 8853886 protein-coding Ints7 integrator complex subunit 7 INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); INTAC complex (ortholog) NW_004955406 5299696 5371496 + 102022459 AGCD01005718;AGCD01005719;AGCD01005720;GBDF01085195;XM_005374746;XM_005374750;XM_013520176 XP_005374803;XP_005374807;XP_013375630 MODEL 39131718 rrna 5S_rRNA 5S ribosomal RNA 39132380 rrna 5S_rRNA 5S ribosomal RNA 10221268 protein-coding LOC106148570 uncharacterized LOC106148570 NW_004955424 2065238 2066513 - 106148570 AGCD01024262;GBBH01204385;XM_013514586 XP_013370040 MODEL 8896992 protein-coding Rab17 RAB17, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); cilium assembly (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); dendrite (ortholog) NW_004955542 2751953 2759661 + 102016749 AGCD01071536;AGCD01071537;XM_005411250 XP_005411307 MODEL 9043291 protein-coding Xpnpep1 X-prolyl aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); manganese ion binding (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN bradykinin catabolic process (ortholog); negative regulation of programmed cell death (ortholog); proteolysis (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955485 1436834 1501408 + 102019066 AGCD01058479;AGCD01058480;AGCD01058481;AGCD01058482;GBDI01236003;XM_005403764;XM_005403767;XM_005403768;XM_013504117;XM_013504118;XM_013504119;XM_013504120 XP_005403821;XP_005403824;XP_005403825;XP_013359571;XP_013359572;XP_013359573;XP_013359574 MODEL 8924130 protein-coding Tiprl TOR signaling pathway regulator ENCODES a protein that exhibits protein phosphatase inhibitor activity (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955462 8921678 8939785 - 102018696 AGCD01049331;GBDF01003611;XM_005398209;XM_005398210;XM_005398213 XP_005398266;XP_005398267;XP_005398270 MODEL 9063370 protein-coding LOC102022061 cytochrome b-c1 complex subunit 6, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); quinol-cytochrome-c reductase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955464 11963706 11975959 - 102022061 AGCD01050169;GBCC01028028;XM_005398683 XP_005398740 MODEL 9006776 protein-coding Rap1gap2 RAP1 GTPase activating protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); regulation of cell size (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955481 296411 537490 - 102029741 AGCD01056784;AGCD01056785;AGCD01056786;AGCD01056787;AGCD01056788;AGCD01056789;AGCD01056790;AGCD01056791;AGCD01056792;GBDF01189289;JN235985;XM_005402558;XM_005402559;XM_005402561;XM_013503470;XM_013503472;XM_013503473;XM_013503475;XM_013503476;XM_013503477;XM_013503478;XM_013503479;XM_013503480;XM_013503481;XM_013503482;XM_013503483;XM_013503484;XR_263755;XR_263756 AEO17026;XP_005402615;XP_005402616;XP_005402618;XP_013358924;XP_013358926;XP_013358927;XP_013358929;XP_013358930;XP_013358931;XP_013358932;XP_013358933;XP_013358934;XP_013358935;XP_013358936;XP_013358937;XP_013358938 MODEL 8772816 protein-coding Dgcr8 DGCR8 microprocessor complex subunit ENCODES a protein that exhibits double-stranded RNA binding (ortholog); heme binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of pre-miRNA processing (ortholog); primary miRNA processing (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); microprocessor complex (ortholog) NW_004955442 17998565 18034247 - 102025296 AGCD01037991;AGCD01037992;AGCD01037993;AGCD01037994;GBCE01023470;XM_005391742;XM_013517769 XP_005391799;XP_013373223 MODEL 8702530 protein-coding Exosc5 exosome component 5 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA deamination (ortholog); mRNA catabolic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); CEREBELLAR ATAXIA, BRAIN ABNORMALITIES, AND CARDIAC CONDUCTION DEFECTS (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); euchromatin (ortholog); exosome (RNase complex) (ortholog) NW_004955555 328130 334106 - 102017167 AGCD01073024;GBBH01163376;XM_005412347 XP_005412404 MODEL 8989693 pseudo LOC102025241 U6 snRNA-associated Sm-like protein LSm3 pseudogene NW_004955480 8692235 8697603 - 102025241 AGCD01056730 MODEL 8751959 protein-coding LOC102024151 odorant-binding protein 2b NW_004955513 2677180 2678707 - 102024151 AGCD01066885;GBBH01002292;GBCE01008927;XM_005408643 XP_005408700 MODEL 8962066 protein-coding Polr1d RNA polymerase I and III subunit D INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase I complex (ortholog); RNA polymerase III complex (ortholog) NW_004955497 7029556 7030128 + 102015417 AGCD01062655;GBCE01074470;GBDK01141758;XM_005406376 XP_005406433 MODEL 8851530 protein-coding Camk1d calcium/calmodulin dependent protein kinase ID ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955462 391235 819240 + 102007201 AGCD01049078;AGCD01049079;AGCD01049080;AGCD01049081;AGCD01049082;AGCD01049083;AGCD01049084;AGCD01049085;AGCD01049086;AGCD01049087;AGCD01049088;GBDF01211716;XM_005398082;XM_005398083;XM_005398084;XM_005398085;XM_013521454 XP_005398139;XP_005398140;XP_005398141;XP_005398142;XP_013376908 MODEL 8901557 protein-coding Arln allregulin ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955428 20939680 20957133 + 102020037 AGCD01028128;GBCQ01098217;XM_013515255 XP_013370709 MODEL 9014295 protein-coding LOC102009370 protein FAM69A NW_004955469 9920282 9922602 + 102009370 AGCD01052521;GBCB01040907;GBDJ01083890;XM_005400517 XP_005400574 MODEL 8892359 protein-coding Elp1 elongator acetyltransferase complex subunit 1 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); INVOLVED IN I-kappaB phosphorylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955419 18035197 18097681 + 102020672 AGCD01020168;GBDF01196206;XM_005382757;XM_013513174 XP_005382814;XP_013368628 MODEL 8700722 protein-coding Sike1 suppressor of IKBKE 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of hippo signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); FAR/SIP/STRIPAK complex (ortholog) NW_004955435 18066428 18076422 - 102022534 AGCD01033383;AGCD01033384;GBCQ01129412;XM_005389015;XM_013516466 XP_005389072;XP_013371920 MODEL 8746723 protein-coding Cul1 cullin 1 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); cell population proliferation (ortholog); PARTICIPATES IN neddylation pathway; Notch signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog); Parkin-FBXW7-Cul1 ubiquitin ligase complex (ortholog); plasma membrane (ortholog) NW_004955491 4165400 4212483 + 102026875 AGCD01060419;AGCD01060420;GBDF01010811;XM_005404888 XP_005404945 MODEL 8897077 protein-coding LOC102006694 olfactory receptor 13A1-like NW_004955507 6424542 6432509 + 102006694 AGCD01065716;XM_005407723 XP_005407780 MODEL 39133489 snrna U4 U4 spliceosomal RNA 39132386 rrna 5S_rRNA 5S ribosomal RNA 8841343 protein-coding LOC102006309 UDP-glucuronosyltransferase 1-8 NW_004955453 2386649 2547914 - 102006309 AGCD01044625;AGCD01044626;AGCD01044627;AGCD01044628;AGCD01044629;AGCD01044630;AGCD01044631;GBDI01068255;XM_005395338;XM_005395339;XM_005395340;XM_005395341;XM_013519894;XM_013519895;XM_013519897;XM_013519898 XP_005395395;XP_005395396;XP_005395397;XP_005395398;XP_013375348;XP_013375349;XP_013375351;XP_013375352 MODEL 8818417 protein-coding Safb2 scaffold attachment factor B2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of androgen receptor signaling pathway (ortholog); Sertoli cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955495 3775301 3802642 + 102025921 AGCD01061879;AGCD01061880;AGCD01061881;GBBH01115695;GBDK01009747;XM_005405763 XP_005405820 MODEL 8849411 protein-coding Tspan1 tetraspanin 1 INVOLVED IN protein stabilization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955464 12089589 12095000 - 102024321 AGCD01050180;GBBH01003796;XM_005398688 XP_005398745 MODEL 9019357 protein-coding Chrna5 cholinergic receptor nicotinic alpha 5 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral response to nicotine (ortholog); cellular response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) NW_004955450 945400 974129 + 102012488 AGCD01042346;GBBH01226333;XM_005393456;XM_005393457;XM_013518824;XM_013518825 XP_005393513;XP_005393514;XP_013374278;XP_013374279 MODEL 39133812 misc_rna 7SK 7SK RNA 8755375 pseudo LOC102029870 suppressor of cytokine signaling 6-like NW_004955492 5905754 5907366 - 102029870 AGCD01060756 MODEL 8890241 protein-coding Rgs8 regulator of G protein signaling 8 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled acetylcholine receptor signaling pathway (ortholog); regulation of dopamine receptor signaling pathway (ortholog); response to amphetamine (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955406 21482810 21523518 - 102018888 AGCD01006128;AGCD01006129;AGCD01006130;GBDF01058403;XM_005375009;XM_005375010;XM_005375011;XM_013521471;XM_013521476 XP_005375066;XP_005375067;XP_005375068;XP_013376925;XP_013376930 MODEL 39134504 misc_rna 7SK 7SK RNA 9043841 ncrna LOC102012598 uncharacterized LOC102012598 NW_004955403 57139269 57141788 + 102012598 AGCD01003149;GBBH01126380;XR_001234448;XR_259277;XR_259278 MODEL 730468967 snorna SNORA57 Small nucleolar RNA SNORA57 9005382 ncrna LOC102005245 uncharacterized LOC102005245 NW_004955468 5664674 5675915 + 102005245 AGCD01051973;GBDF01154207;XR_001236889;XR_263388;XR_263389;XR_263390 MODEL 8886161 pseudo LOC102010531 60S ribosomal protein L37 pseudogene NW_004955446 2571700 2571990 + 102010531 AGCD01039985 MODEL 8983154 protein-coding Cckbr cholecystokinin B receptor ENCODES a protein that exhibits cholecystokinin receptor activity (ortholog); gastrin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN behavioral defense response (ortholog); cholecystokinin signaling pathway (ortholog); digestive tract development (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); colitis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955414 22001351 22011275 + 102018177 AGCD01015440;GBBH01051685;XM_005380128;XM_005380130 XP_005380185;XP_005380187 MODEL 8805423 protein-coding Tagln transgelin INVOLVED IN cellular response to platelet-derived growth factor stimulus (ortholog); cytoskeleton organization (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic dissection (ortholog); Carotid Artery Injuries (ortholog) NW_004955412 18523469 18529285 + 102025667 AGCD01012944;GBCE01122330;XM_005378201;XM_005378202 XP_005378258;XP_005378259 MODEL 8708010 protein-coding Foxk2 forkhead box K2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular respiration (ortholog); intracellular glucose homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955506 567770 614505 - 102020270 AGCD01065232;GBCB01044212;GBDF01003155;XM_005407499 XP_005407556 MODEL 8855855 pseudo LOC102003440 ankyrin repeat domain-containing protein 27 pseudogene NW_004955474 5254195 5258861 - 102003440 AGCD01054402 MODEL 8703700 protein-coding Ptpn11 protein tyrosine phosphatase non-receptor type 11 ENCODES a protein that exhibits cadherin binding (ortholog); cell adhesion molecule binding (ortholog); D1 dopamine receptor binding (ortholog); INVOLVED IN atrioventricular canal development (ortholog); axonogenesis (ortholog); Bergmann glial cell differentiation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955482 8934734 9031230 + 102009502 AGCD01057558;AGCD01057559;AGCD01057560;GBDF01081705;XM_005403196;XM_005403197;XM_005403198;XM_013503715;XM_013503717 XP_005403253;XP_005403254;XP_005403255;XP_013359169;XP_013359171 MODEL 9004427 ncrna LOC102003811 uncharacterized LOC102003811 NW_004955442 15113086 15113646 + 102003811 AGCD01037859;GBBH01035320;XR_262150 MODEL 8906806 protein-coding Bckdk branched chain keto acid dehydrogenase kinase ENCODES a protein that exhibits [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity (ortholog); ATP binding (ortholog); protein kinase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); L-isoleucine catabolic process (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN valine, leucine and isoleucine degradation pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Arachnoid Cysts (ortholog); asthma (ortholog); FOUND IN mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) NW_004955493 7940358 7946317 + 102028429 AGCD01061242;AGCD01061243;GBDF01000930;GBDK01069971;XM_005405298 XP_005405355 MODEL 8764888 protein-coding LOC102006696 olfactory receptor 1038-like NW_004955511 1584309 1585274 + 102006696 AGCD01066372;XM_005407966 XP_005408023 MODEL 8723404 protein-coding Xpnpep2 X-prolyl aminopeptidase 2 ENCODES a protein that exhibits aminopeptidase activity (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); acute myeloid leukemia (ortholog); angioedema (ortholog); FOUND IN extracellular exosome (ortholog) NW_004955473 5248065 5274469 - 102013166 AGCD01053973;GBCQ01010121;XM_005401259 XP_005401316 MODEL 8780380 protein-coding Ppp1r12b protein phosphatase 1 regulatory subunit 12B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast lobular carcinoma (ortholog); FOUND IN A band (ortholog); Z disc (ortholog) NW_004955406 38405297 38636503 + 102024760 AGCD01006601;AGCD01006602;AGCD01006603;AGCD01006604;AGCD01006605;AGCD01006606;AGCD01006607;AGCD01006608;AGCD01006609;GBCB01001973;XM_005375213;XM_005375215;XM_005375216;XM_005375218;XM_005375220;XM_005375223;XM_013522381;XM_013522389;XM_013522394;XM_013522404;XR_001236900;XR_001236901;XR_259519;XR_259520 XP_005375270;XP_005375272;XP_005375273;XP_005375275;XP_005375277;XP_005375280;XP_013377835;XP_013377843;XP_013377848;XP_013377858 MODEL 8952288 pseudo LOC102018749 serine/threonine-protein kinase WNK1-like NW_004955427 10801144 10809468 - 102018749 AGCD01027157 MODEL 8951256 protein-coding LOC102007838 vomeronasal type-1 receptor 2-like NW_004955603 405739 406635 + 102007838 AGCD01076843;XM_005414838 XP_005414895 MODEL 10289161 ncrna LOC106147481 uncharacterized LOC106147481 NW_004955567 60768 71971 + 106147481 AGCD01074376;GBCQ01143758;XR_001232402 MODEL 8802923 pseudo LOC102011311 methionine aminopeptidase 2 pseudogene NW_004955416 12398435 12418557 - 102011311 AGCD01017205;AGCD01017206 MODEL 8730248 protein-coding Cotl1 coactosin like F-actin binding protein 1 ENCODES a protein that exhibits actin binding (ortholog); enzyme binding (ortholog); INVOLVED IN defense response to fungus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955541 153542 183965 - 102014395 AGCD01071345;GBBH01000331;GBDI01017951;XM_005410962 XP_005411019 MODEL 8714964 protein-coding Dgka diacylglycerol kinase alpha ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955458 3517519 3544651 + 102024532 AGCD01047314;AGCD01047315;AGCD01047316;AGCD01047317;GBCE01166881;XM_005397269;XM_013520902;XM_013520903;XM_013520904;XM_013520905 XP_005397326;XP_013376356;XP_013376357;XP_013376358;XP_013376359 MODEL 9013773 protein-coding Exosc6 exosome component 6 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN DNA deamination (ortholog); isotype switching (ortholog); positive regulation of isotype switching (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nucleolus (ortholog) NW_004955484 3088133 3089551 - 102028636 AGCD01058153;AGCD01058154;GBDJ01421667;GBDK01319978;XM_013503930 XP_013359384 MODEL 10230186 protein-coding LOC106148571 uncharacterized LOC106148571 NW_004955424 15175606 15179880 + 106148571 AGCD01024695;XM_013514589 XP_013370043 MODEL 8984309 protein-coding Ints8 integrator complex subunit 8 INVOLVED IN protein localization to chromatin (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); INTAC complex (ortholog) NW_004955417 10975716 11027697 + 102028858 AGCD01018113;AGCD01018114;AGCD01018115;AGCD01018116;AGCD01018117;AGCD01018118;GBDF01005684;XM_005381819 XP_005381876 MODEL 8768755 protein-coding LOC102025968 cytochrome c oxidase assembly factor 3 homolog, mitochondrial ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); mitochondrial complex IV deficiency nuclear type 1 (ortholog); mitochondrial complex IV deficiency nuclear type 14 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955451 16607495 16608732 - 102025968 AGCD01043696;GBDK01080832;XM_005394486 XP_005394543 MODEL 8875091 protein-coding Camk1g calcium/calmodulin dependent protein kinase IG ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); endomembrane system (ortholog); plasma membrane (ortholog) NW_004955489 2604030 2629394 - 102025693 AGCD01059872;GBBH01066788;XM_005404544 XP_005404601 MODEL 8963940 protein-coding LOC102005583 apolipoprotein L2-like NW_004955413 22371700 22393689 - 102005583 AGCD01014294;AGCD01014295;AGCD01014296;AGCD01014297;AGCD01014298;AGCD01014299;XM_005379646 XP_005379703 MODEL 626189195 snorna SNORD60 Small nucleolar RNA SNORD60 8765624 protein-coding Elp2 elongator acetyltransferase complex subunit 2 ENCODES a protein that exhibits protein kinase binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN regulation of receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955402 22698817 22742691 + 102009129 AGCD01000609;AGCD01000610;GBDF01125422;XM_005372807;XM_005372808 XP_005372864;XP_005372865 MODEL 9003351 protein-coding Armc1 armadillo repeat containing 1 INVOLVED IN intracellular distribution of mitochondria (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955444 13537904 13570718 + 102021489 AGCD01039103;GBDF01155972;XM_005392165;XM_005392166;XM_013518216;XM_013518217 XP_005392222;XP_005392223;XP_013373670;XP_013373671 MODEL 8840237 protein-coding Sil1 SIL1 nucleotide exchange factor ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cataract (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955418 1322644 1583352 + 102022083 AGCD01018715;AGCD01018716;AGCD01018717;AGCD01018718;AGCD01018719;AGCD01018720;AGCD01018721;AGCD01018722;AGCD01018723;GBDF01053304;XM_005382084;XM_005382085;XM_005382087;XM_013512922;XM_013512923 XP_005382141;XP_005382142;XP_005382144;XP_013368376;XP_013368377 MODEL 39133490 snrna U4 U4 spliceosomal RNA 8941477 protein-coding Tirap TIR domain containing adaptor protein ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Bacteremia (ortholog); Immunodeficiency 67 (ortholog); malaria (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) NW_004955412 27303548 27315031 + 102004684 AGCD01013233;GBCE01142482;XM_005378502 XP_005378559 MODEL 8901558 pseudo LOC102022062 aldose reductase-related protein 2 pseudogene NW_004955412 7565711 7566629 - 102022062 AGCD01012701 MODEL 9017466 protein-coding Foxl2 forkhead box L2 ENCODES a protein that exhibits cysteine-type endopeptidase regulator activity involved in apoptotic process (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); embryonic eye morphogenesis (ortholog); extraocular skeletal muscle development (ortholog); ASSOCIATED WITH blepharophimosis (ortholog); Blepharophimosis Syndrome Type 1 (ortholog); Blepharophimosis Syndrome Type 2 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955501 83965 84476 + 102003566 AGCD01063987;GBDF01292934;GBDJ01297885;XM_013505728 XP_013361182 MODEL 9050829 protein-coding Lrrfip1 LRR binding FLII interacting protein 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955542 2632933 2737922 - 102003380 AGCD01071530;AGCD01071531;AGCD01071532;AGCD01071533;GBBH01034483;XM_005411206;XM_005411212;XM_005411213;XM_013508023;XM_013508025;XM_013508026;XM_013508027;XM_013508028;XM_013508029;XM_013508030;XM_013508031;XM_013508032;XM_013508033;XM_013508034;XM_013508036;XM_013508037;XM_013508038;XM_013508039;XM_013508040;XM_013508041;XM_013508042;XM_013508043;XM_013508044;XM_013508045;XM_013508046;XM_013508047;XM_013508048;XM_013508049;XM_013508050;XM_013508051;XM_013508052;XM_013508053;XM_013508054;XM_013508055 XP_005411263;XP_005411269;XP_005411270;XP_013363477;XP_013363479;XP_013363480;XP_013363481;XP_013363482;XP_013363483;XP_013363484;XP_013363485;XP_013363486;XP_013363487;XP_013363488;XP_013363490;XP_013363491;XP_013363492;XP_013363493;XP_013363494;XP_013363495;XP_013363496;XP_013363497;XP_013363498;XP_013363499;XP_013363500;XP_013363501;XP_013363502;XP_013363503;XP_013363504;XP_013363505;XP_013363506;XP_013363507;XP_013363508;XP_013363509 MODEL 8799804 protein-coding Efna2 ephrin A2 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); bone remodeling (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN neuromuscular junction (ortholog); perikaryon (ortholog) NW_004955495 6614828 6627287 - 102007446 AGCD01062085;GBBH01085949;XM_013505059 XP_013360513 MODEL 8873584 pseudo LOC102006312 uncharacterized LOC102006312 NW_004955454 13491911 13530089 - 102006312 AGCD01045438;AGCD01045439;AGCD01045440;AGCD01045441;AGCD01045442;AGCD01045443;AGCD01045444 MODEL 8983683 protein-coding Dcun1d3 defective in cullin neddylation 1 domain containing 3 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein neddylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955493 153226 186824 - 102004718 AGCD01060840;AGCD01060841;GBDK01116995;XM_005405044;XM_005405045;XM_005405046;XM_005405047;XM_013504830;XM_013504831 XP_005405101;XP_005405102;XP_005405103;XP_005405104;XP_013360284;XP_013360285 MODEL 8715687 protein-coding Rap1gds1 Rap1 GTPase-GDP dissociation stimulator 1 ENCODES a protein that exhibits GTPase regulator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); CAAX-box protein maturation (ortholog); cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ALFADHEL SYNDROME (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955405 8555117 8708604 + 102019351 AGCD01004747;AGCD01004748;AGCD01004749;AGCD01004750;GBDF01002792;GBDF01002797;XM_013517446;XM_013517447 XP_013372900;XP_013372901 MODEL 8730431 ncrna LOC102024154 uncharacterized LOC102024154 NW_004955515 4883104 4889729 - 102024154 AGCD01067332;GBDF01014882;XR_264527 MODEL 8909018 ncrna LOC102012980 uncharacterized LOC102012980 NW_004955426 6108020 6117151 - 102012980 AGCD01026144;GBCE01090878;XR_001234326;XR_261191 MODEL 8737732 protein-coding Chrna6 cholinergic receptor nicotinic alpha 6 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral response to nicotine (ortholog); membrane depolarization (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol use disorder (ortholog); Breast Cancer, Familial (ortholog); cocaine abuse (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); dopaminergic synapse (ortholog); postsynaptic membrane (ortholog) NW_004955536 166212 172551 + 102022426 AGCD01070716;AGCD01070717;XM_013507721 XP_013363175 MODEL 9058092 pseudo LOC102018751 protein DBF4 homolog A pseudogene NW_004955428 18917893 18919918 - 102018751 AGCD01028074 MODEL 8975162 protein-coding Dusp8 dual specificity phosphatase 8 ENCODES a protein that exhibits phosphatase activity (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway NW_004955476 10816647 10826787 + 102029618 AGCD01055431;GBCE01057397;GBDF01144903;XM_013503009 XP_013358463 MODEL 8876239 protein-coding LOC102005247 apolipoprotein L6-like NW_004955413 21930891 21954562 + 102005247 AGCD01014275;AGCD01014276;AGCD01014277;GBDJ01276595;XM_005379645 XP_005379702 MODEL 8771618 protein-coding Rab18 RAB18, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); lipid droplet organization (ortholog); sterol homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955462 1380158 1411804 + 102025662 AGCD01049116;AGCD01049117;GBDF01088111;GBDF01088112;XM_013521463 XP_013376917 MODEL 39132387 rrna 5S_rRNA 5S ribosomal RNA 8761605 protein-coding Cul2 cullin 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955462 2580117 2659849 + 102019037 AGCD01049176;AGCD01049177;GBDI01222773;XM_005398124;XM_013521460;XM_013521461;XM_013521462 XP_005398181;XP_013376914;XP_013376915;XP_013376916 MODEL 8789680 pseudo LOC102003813 small nuclear ribonucleoprotein Sm D2 pseudogene NW_004955561 1082911 1083548 - 102003813 AGCD01073830 MODEL 9003567 protein-coding Slc22a31 solute carrier family 22 member 31 ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955541 2894053 2897032 - 102028132 AGCD01071430;GBCQ01164308;XM_013507988 XP_013363442 MODEL 8720381 protein-coding LOC102006698 olfactory receptor 1020-like NW_004955511 682056 682990 + 102006698 AGCD01066337;XM_013506361 XP_013361815 MODEL 8845470 protein-coding Tspan10 tetraspanin 10 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955506 1442378 1448726 - 102003161 AGCD01065263;AGCD01065264;GBCE01121011;XM_005407269;XM_005407270 XP_005407326;XP_005407327 MODEL 8944438 pseudo LOC102029875 E2F-associated phosphoprotein pseudogene NW_004955496 5233234 5236059 + 102029875 AGCD01062348 MODEL 39134505 misc_rna 7SK 7SK RNA 8931053 protein-coding Polr1e RNA polymerase I subunit E ENCODES a protein that exhibits RNA polymerase I general transcription initiation factor binding (ortholog); INVOLVED IN nucleolar large rRNA transcription by RNA polymerase I (ortholog); RNA polymerase I preinitiation complex assembly (ortholog); transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955419 28970982 28983862 - 102006779 AGCD01020481;GBDF01224045;XM_005382878 XP_005382935 MODEL 8952705 ncrna LOC102009372 uncharacterized LOC102009372 NW_004955470 3387443 3399619 - 102009372 AGCD01052700;GBDF01014209;XR_263462 MODEL 10346777 protein-coding LOC106147482 uncharacterized LOC106147482 NW_004955567 1149476 1179237 - 106147482 AGCD01074460;AGCD01074461;XM_013509289 XP_013364743 MODEL 8985441 protein-coding LOC102012606 dual specificity protein phosphatase 18-like NW_004955453 12279178 12280813 + 102012606 AGCD01044830;XM_013519757 XP_013375211 MODEL 9051791 protein-coding LOC102006314 keratin-associated protein 20-2-like NW_004955407 30126888 30127076 + 102006314 AGCD01007628;XM_005375638 XP_005375695 MODEL 730469443 snorna SNORA58 Small nucleolar RNA SNORA58 8716690 protein-coding LOC102011313 uncharacterized LOC102011313 NW_004955417 26374063 26401589 - 102011313 AGCD01018507;AGCD01018508;AGCD01018509;GBBH01003039;XM_005381923;XM_013512715;XM_013512716;XM_013512717;XM_013512718;XM_013512719;XM_013512720;XM_013512721;XM_013512722;XM_013512723;XM_013512724;XM_013512725;XM_013512726;XM_013512727;XM_013512728;XM_013512729;XM_013512730;XM_013512731;XM_013512732;XM_013512734;XR_001233417;XR_001233418 XP_005381980;XP_013368169;XP_013368170;XP_013368171;XP_013368172;XP_013368173;XP_013368174;XP_013368175;XP_013368176;XP_013368177;XP_013368178;XP_013368179;XP_013368180;XP_013368181;XP_013368182;XP_013368183;XP_013368184;XP_013368185;XP_013368186;XP_013368188 MODEL 8725945 protein-coding Ccl1 C-C motif chemokine ligand 1 ENCODES a protein that exhibits chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to interleukin-17 (ortholog); chemotaxis (ortholog); ASSOCIATED WITH asthma (ortholog); chronic obstructive pulmonary disease (ortholog); endometriosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955481 9085943 9089147 - 102004708 AGCD01057094;GBDK01334841;XM_005402841;XM_005402842 XP_005402898;XP_005402899 MODEL 8903025 protein-coding Dgkb diacylglycerol kinase beta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extrinsic component of postsynaptic density membrane (ortholog) NW_004955410 17677375 18304409 - 102019368 AGCD01010991;AGCD01010992;AGCD01010993;AGCD01010994;AGCD01010995;AGCD01010996;AGCD01010997;AGCD01010998;AGCD01010999;AGCD01011000;AGCD01011001;AGCD01011002;GBDJ01401747;XM_005377328;XM_013510618;XM_013510619;XM_013510620;XM_013510621;XM_013510623;XM_013510624 XP_005377385;XP_013366072;XP_013366073;XP_013366074;XP_013366075;XP_013366077;XP_013366078 MODEL 8741352 pseudo LOC102003443 mitochondrial fission factor pseudogene NW_004955416 13475518 13476401 - 102003443 AGCD01017224;XM_005381465 MODEL 8963946 ncrna LOC102005587 uncharacterized LOC102005587 NW_004955470 11311958 11314586 - 102005587 AGCD01052885;GBDF01111978;XR_263502 MODEL 39131719 rrna 5S_rRNA 5S ribosomal RNA 9009561 protein-coding Sag S-antigen visual arrestin ENCODES a protein that exhibits opsin binding (ortholog); phosphoprotein binding (ortholog); protein sequestering activity (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cone-rod dystrophy (ortholog); congenital stationary night blindness (ortholog); FOUND IN membrane (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) NW_004955453 2845561 2878342 - 102009796 AGCD01044642;AGCD01044643;AGCD01044644;AGCD01044645;GBDK01342716;XM_005395351;XM_005395352;XM_013519856;XM_013519857 XP_005395408;XP_005395409;XP_013375310;XP_013375311 MODEL 8956138 protein-coding Bcl10 BCL10 immune signaling adaptor ENCODES a protein that exhibits CARD domain binding (ortholog); general transcription initiation factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH colon carcinoma (ortholog); disease of cellular proliferation (ortholog); extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); cytoplasmic microtubule (ortholog) NW_004955423 8710231 8720530 + 102025023 AGCD01023635;GBCQ01126750;XM_005385139;XM_013514539 XP_005385196;XP_013369993 MODEL 8891548 protein-coding Dusp9 dual specificity phosphatase 9 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); thymoma (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955580 388277 392269 + 102013565 AGCD01075602;AGCD01075603;GBCQ01088638;XM_013509676 XP_013365130 MODEL 8821644 ncrna LOC102025248 uncharacterized LOC102025248 NW_004955485 8508562 8510362 - 102025248 AGCD01058717;GBDF01051854;XR_263929 MODEL 8734061 protein-coding Ppp1r12c protein phosphatase 1 regulatory subunit 12C ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955567 1058676 1072555 + 102005426 AGCD01074457;AGCD01074458;GBCE01055419;GBDJ01084720;XM_013509250;XM_013509251;XM_013509252;XM_013509253;XM_013509254 XP_013364704;XP_013364705;XP_013364706;XP_013364707;XP_013364708 MODEL 9055654 protein-coding Elp3 elongator acetyltransferase complex subunit 3 ENCODES a protein that exhibits acetyltransferase activity (ortholog); INVOLVED IN central nervous system development (ortholog); neuron migration (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Animal Disease Models (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955403 50565496 50635226 + 102011270 AGCD01002967;GBDF01124985;XM_005373765;XM_005373767 XP_005373822;XP_005373824 MODEL 8768459 protein-coding Armc10 armadillo repeat containing 10 ENCODES a protein that exhibits DNA binding domain binding (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of growth rate (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955410 8203127 8217421 + 102014020 AGCD01010737;AGCD01010738;GBDF01193884;XM_005377218;XM_005377219 XP_005377275;XP_005377276 MODEL 8903301 protein-coding Rgs9 regulator of G protein signaling 9 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN dark adaptation (ortholog); G protein-coupled dopamine receptor signaling pathway (ortholog); light adaption (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH bradyopsia (ortholog); bradyopsia 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cone photoreceptor outer segment (ortholog); glutamatergic synapse (ortholog); photoreceptor inner segment (ortholog) NW_004955478 4614730 4683152 + 102004811 AGCD01055853;AGCD01055854;AGCD01055855;GBDF01291760;XM_005402137 XP_005402194 MODEL 9045435 protein-coding Foxm1 forkhead box M1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); phosphatidylinositol 3-kinase catalytic subunit binding (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); G2/M transition of mitotic cell cycle (ortholog); liver development (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); Experimental Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955429 18392545 18405254 - 102022838 AGCD01028900;AGCD01028901;GBDF01010762;XM_005387119;XM_005387120;XM_005387121;XM_013515474 XP_005387176;XP_005387177;XP_005387178;XP_013370928 MODEL 8777377 protein-coding COX1 cytochrome c oxidase subunit I MT 5331 6875 + 15822225 JX312692 AFQ55779;YP_008080747 REVIEWED 9055392 protein-coding LOC102024155 zinc finger protein 709-like NW_004955432 4485530 4494277 + 102024155 AGCD01030722;AGCD01030723;GBDF01195694;XM_013515914 XP_013371368 MODEL 9057953 pseudo LOC102012982 60S ribosomal protein L5 pseudogene NW_004955503 7021624 7022501 - 102012982 AGCD01064776 MODEL 8749244 protein-coding LOC102018754 vomeronasal type-1 receptor 90-like NW_004955429 12434233 12435165 + 102018754 AGCD01028716;XM_005387250 XP_005387307 MODEL 8841169 pseudo LOC102025970 UPF0587 protein C1orf123 pseudogene NW_004955404 33187380 33187862 + 102025970 AGCD01004058 MODEL 8842640 protein-coding Chrna7 cholinergic receptor nicotinic alpha 7 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); associative learning (ortholog); B cell activation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); Auditory Perceptual Disorders (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); apical plasma membrane (ortholog); asymmetric synapse (ortholog) NW_004955416 30687518 30798700 + 102021007 AGCD01017700;AGCD01017701;AGCD01017702;GBCE01011635;XM_013512688 XP_013368142 MODEL 8810341 protein-coding LOC102005250 olfactory receptor 51L1-like NW_004955414 21095282 21096259 - 102005250 AGCD01015407;XM_005380492 XP_005380549 MODEL 39133491 snrna U4 U4 spliceosomal RNA 8996427 protein-coding Ptpn12 protein tyrosine phosphatase non-receptor type 12 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); regulation of epidermal growth factor receptor signaling pathway (ortholog); tissue regeneration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); podosome (ortholog) NW_004955410 7556283 7599170 - 102011513 AGCD01010719;AGCD01010720;GBBH01228182;XM_005377213 XP_005377270 MODEL 39133813 misc_rna 7SK 7SK RNA 9049670 protein-coding Xpnpep3 X-prolyl aminopeptidase 3 ENCODES a protein that exhibits aminopeptidase activity (ortholog); manganese ion binding (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN glomerular filtration (ortholog); protein processing (ortholog); proteolysis (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955413 26507860 26564105 + 102012848 AGCD01014446;AGCD01014447;AGCD01014448;AGCD01014449;AGCD01014450;GBDF01158243;XM_005379329;XM_005379330;XM_005379334;XM_013511350;XM_013511351 XP_005379386;XP_005379387;XP_005379391;XP_013366804;XP_013366805 MODEL 8804625 protein-coding Sim1 SIM bHLH transcription factor 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); ureteric bud development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleus (ortholog) NW_004955411 26173009 26256545 - 102025885 AGCD01012174;AGCD01012175;GBDK01307262;XM_005377811 XP_005377868 MODEL 9018643 protein-coding Tjap1 tight junction associated protein 1 INVOLVED IN Golgi organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); Golgi apparatus (ortholog) NW_004955437 9314472 9337021 + 102008661 AGCD01034525;AGCD01034526;GBCE01098674;XM_005389769;XM_005389770;XM_005389773;XM_005389774;XM_005389776;XM_013516816;XM_013516818;XM_013516819 XP_005389826;XP_005389827;XP_005389830;XP_005389831;XP_005389833;XP_013372270;XP_013372272;XP_013372273 MODEL 9051090 protein-coding LOC102007845 cadherin-4 NW_004956069 2464 8492 + 102007845 AGCD01078992;GBDF01207475;XM_005415167 XP_005415224 MODEL 8996270 ncrna LOC102003814 uncharacterized LOC102003814 NW_004955444 9445917 9463729 - 102003814 AGCD01038970;GBDF01128007;XR_262253;XR_262254 MODEL 9066213 ncrna LOC102010532 uncharacterized LOC102010532 NW_004955447 16858642 16860472 - 102010532 AGCD01041110;GBDF01286927;XR_001235700 MODEL 9036056 protein-coding Exosc7 exosome component 7 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nuclear speck (ortholog) NW_004955420 26677692 26697977 - 102010166 AGCD01021427;GBCQ01041300;XM_005383478 XP_005383535 MODEL 8931908 pseudo LOC102006699 acyl-protein thioesterase 1 pseudogene NW_004955430 12369664 12370317 + 102006699 AGCD01029499 MODEL 8851393 protein-coding Lrrfip2 LRR binding FLII interacting protein 2 ENCODES a protein that exhibits LRR domain binding (ortholog); INVOLVED IN MyD88-dependent toll-like receptor 4 signaling pathway (ortholog); MyD88-independent toll-like receptor signaling pathway (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955421 3938054 4066701 - 102005383 AGCD01021673;AGCD01021674;AGCD01021675;AGCD01021676;GBDI01358248;XM_005383693;XM_005383702;XM_013513681;XM_013513682;XM_013513683;XM_013513684;XM_013513685;XM_013513686;XM_013513687;XM_013513688;XM_013513689;XM_013513690;XM_013513691 XP_005383750;XP_005383759;XP_013369135;XP_013369136;XP_013369137;XP_013369138;XP_013369139;XP_013369140;XP_013369141;XP_013369142;XP_013369143;XP_013369144;XP_013369145 MODEL 8720045 protein-coding Slc22a4 solute carrier family 22 member 4 ENCODES a protein that exhibits acetylcholine transmembrane transporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); amino-acid betaine transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine uptake (ortholog); amino acid import across plasma membrane (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN cisplatin response pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); clear cell renal cell carcinoma (ortholog); Coxsackievirus Infections (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); mitochondrial membrane (ortholog) NW_004955408 3671772 3737946 + 102014984 AGCD01008071;AGCD01008072;AGCD01008073;GBDI01289956;XM_013508300 XP_013363754 MODEL 9000326 protein-coding Rap2a RAP2A, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); establishment of protein localization (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); endolysosome (ortholog); Golgi apparatus (ortholog) NW_004955404 12897518 12936964 - 102018678 AGCD01003477;GBDI01138502;GBDK01273710;XM_005374084 XP_005374141 MODEL 39134506 misc_rna 7SK 7SK RNA 8746919 protein-coding Tagln2 transgelin 2 INVOLVED IN epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); esophageal cancer (ortholog) NW_004955468 11713809 11721125 - 102009367 AGCD01052137;AY533232;GBBH01003714;XM_005400179;XM_005400180 XP_005400236;XP_005400237 MODEL 9022906 protein-coding Ints9 integrator complex subunit 9 INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) NW_004955403 51111418 51199430 - 102016222 AGCD01002988;GBDF01222215;XM_005373781 XP_005373838 MODEL 10175401 protein-coding LOC106148572 uncharacterized LOC106148572 NW_004955424 19446864 19459238 + 106148572 AGCD01024825;AGCD01024826;AGCD01024827;GBBH01224543;XM_013514591 XP_013370045 MODEL 8716284 protein-coding Camk2a calcium/calmodulin dependent protein kinase II alpha ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); glutamate receptor binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); calcium ion transport (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; fibroblast growth factor signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN axon (ortholog); calcium- and calmodulin-dependent protein kinase complex (ortholog); dendrite (ortholog) NW_004955415 4247307 4307402 + 102017328 AGCD01015968;GBDF01299177;XM_005380581;XM_005380582 XP_005380638;XP_005380639 MODEL 8833033 protein-coding LOC102012609 ras-related protein Rap-1A NW_004955407 658498 659795 + 102012609 AGCD01006756;XM_005375497 XP_005375554 MODEL 8767407 protein-coding Ccl14 C-C motif chemokine ligand 14 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955481 10336758 10340397 - 102022701 AGCD01057142;GBDK01277516;XM_005402898 XP_005402955 MODEL 8781001 protein-coding Rab19 RAB19, member RAS oncogene family ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955494 2878562 2885766 - 102021776 AGCD01061452;AGCD01061453;AGCD01061454;GBCQ01072981;XM_005405422 XP_005405479 MODEL 8800605 protein-coding LOC102011316 olfactory receptor 2T2-like NW_004955418 30170706 30175904 - 102011316 AGCD01019506;GBBH01082943;XM_005382368 XP_005382425 MODEL 8971889 protein-coding Cul3 cullin 3 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); Notch binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; Wnt signaling, canonical pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN centrosome (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955453 9546554 9629976 + 102018560 AGCD01044772;AGCD01044773;AGCD01044774;GBBH01114512;GBCB01007204;XM_013519956 XP_013375410 MODEL 9054956 protein-coding Camk2b calcium/calmodulin dependent protein kinase II beta ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); identical protein binding (ortholog); phospholipase binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); calcium ion transport (ortholog); cell projection morphogenesis (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; p38 MAPK signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH anemia (ortholog); asthma (ortholog); astigmatism (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955456 7711583 7760506 + 102008700 AGCD01046430;AGCD01046431;GBCB01000457;XM_013520515 XP_013375969 MODEL 8795136 ncrna LOC102025249 uncharacterized LOC102025249 NW_004955420 13631690 13636547 + 102025249 AGCD01020925;GBDF01082247;XR_260714 MODEL 8703235 protein-coding Sall1 spalt like transcription factor 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN adrenal gland development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); embryonic digestive tract development (ortholog); ASSOCIATED WITH Arachnoid Cysts (ortholog); Bone Fractures (ortholog); brachydactyly (ortholog); FOUND IN chromocenter (ortholog); cytoplasm (ortholog); heterochromatin (ortholog) NW_004955433 9146074 9161171 - 102019424 AGCD01031610;GBDI01327095;XM_005388281 XP_005388338 MODEL 9011999 protein-coding Dcun1d4 defective in cullin neddylation 1 domain containing 4 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955447 18562946 18641179 - 102019218 AGCD01041180;AGCD01041181;GBBH01131669;XM_005392924;XM_013518545;XM_013518546 XP_005392981;XP_013373999;XP_013374000 MODEL 9010156 protein-coding LOC102029877 tubulin alpha-1 chain ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Breast Cancer, Familial (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 24 (ortholog); FOUND IN cilium (ortholog); cytoplasmic microtubule (ortholog); membrane raft (ortholog) NW_004955500 8083239 8092137 + 102029877 AGCD01063975;AGCD01063976;AGCD01063977;GBDF01253503;XM_013505641 XP_013361095 MODEL 8809700 protein-coding Tspan12 tetraspanin 12 ENCODES a protein that exhibits Wnt receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); maintenance of blood-brain barrier (ortholog); Norrin signaling pathway (ortholog); ASSOCIATED WITH Disease Susceptibility (ortholog); exudative vitreoretinopathy (ortholog); exudative vitreoretinopathy 5 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955479 2570937 2636884 - 102005930 AGCD01056276;AGCD01056277;GBCB01074924;GBCE01134144;XM_013503288 XP_013358742 MODEL 8852622 ncrna LOC102009373 uncharacterized LOC102009373 NW_004955471 267562 303293 + 102009373 AGCD01052952;AGCD01052953;AGCD01052954;GBDK01102526;XR_001237060;XR_263510 MODEL 8786955 ncrna LOC102006319 uncharacterized LOC102006319 NW_004955460 7406510 7414067 - 102006319 AGCD01048481;XR_263037 MODEL 730469268 snorna SNORD60 Small nucleolar RNA SNORD60 39132392 rrna 5S_rRNA 5S ribosomal RNA 8963841 protein-coding Foxn1 forkhead box N1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); epidermis development (ortholog); hair follicle development (ortholog); ASSOCIATED WITH alopecia (ortholog); autistic disorder (ortholog); DiGeorge syndrome (ortholog) NW_004955481 4611246 4640606 - 102003446 AGCD01056948;GBDF01157227;XM_005402750;XM_005402751;XM_013503336;XM_013503337;XM_013503338;XM_013503339;XM_013503340 XP_005402807;XP_005402808;XP_013358790;XP_013358791;XP_013358792;XP_013358793;XP_013358794 MODEL 8818995 ncrna LOC102022063 uncharacterized LOC102022063 NW_004955466 4134667 4136679 - 102022063 AGCD01050819;AGCD01050820;GBDF01115192;XR_263288 MODEL 8984664 pseudo LOC102012983 charged multivesicular body protein 3-like NW_004955427 345772 346720 + 102012983 AGCD01026828 MODEL 8961488 ncrna LOC102018759 uncharacterized LOC102018759 NW_004955434 343225 349646 + 102018759 AGCD01032022;AGCD01032023;AGCD01032024;GBDK01384477;XR_261606 MODEL 9064255 ncrna LOC102005254 uncharacterized LOC102005254 NW_004955417 12247480 12249907 + 102005254 AGCD01018159;GBDF01276663;XR_260475 MODEL 8968687 protein-coding Dgkd diacylglycerol kinase delta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN diacylglycerol catabolic process (ortholog); diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955453 2740922 2802669 - 102007619 AGCD01044636;AGCD01044637;GBCB01039518;GBCB01111507;XM_013519863;XM_013519864;XM_013519865;XM_013519866;XM_013519867 XP_013375317;XP_013375318;XP_013375319;XP_013375320;XP_013375321 MODEL 39133492 snrna U4 U4 spliceosomal RNA 8768922 protein-coding LOC102005588 olfactory receptor 51L1-like NW_004955414 21113707 21117034 - 102005588 AGCD01015407;XM_005380493 XP_005380550 MODEL 8972871 protein-coding Polr1f RNA polymerase I subunit F INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH lung cancer (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); RNA polymerase I complex (ortholog) NW_004955410 22435136 22442839 - 102028505 AGCD01011074;GBCB01041940;XM_005377356 XP_005377413 MODEL 8797631 protein-coding Dut deoxyuridine triphosphatase ENCODES a protein that exhibits dUTP diphosphatase activity (ortholog); identical protein binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN dTMP biosynthetic process (ortholog); dUMP biosynthetic process (ortholog); dUTP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH Bone Marrow Failure and Diabetes Mellitus Syndrome (ortholog); Brain Neoplasms (ortholog); High Myopia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955409 5574810 5584135 - 102012506 AGCD01009319;AGCD01009320;GBDF01000559;XM_005376703;XM_005376704;XM_013510306 XP_005376760;XP_005376761;XP_013365760 MODEL 8764029 protein-coding Elp4 elongator acetyltransferase complex subunit 4 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH aniridia (ortholog); aniridia 1 (ortholog); Aniridia 2 (ortholog); FOUND IN cytoplasm (ortholog); elongator holoenzyme complex (ortholog); nucleoplasm (ortholog) NW_004955476 9850110 10054313 + 102025238 AGCD01055400;AGCD01055401;AGCD01055402;AGCD01055403;AGCD01055404;AGCD01055405;AGCD01055406;AGCD01055407;GBDF01160723;XM_005401773;XM_005401774 XP_005401830;XP_005401831 MODEL 626189172 snorna SNORA58 Small nucleolar RNA SNORA58 8711925 pseudo LOC102010533 olfactory receptor 2B6-like NW_004955576 1225109 1226068 - 102010533 AGCD01075364;XM_005413950 MODEL 8878325 protein-coding LOC102024157 vomeronasal type-2 receptor 116-like NW_004955524 574634 590185 - 102024157 AGCD01068685;XM_013507187 XP_013362641 MODEL 9021137 pseudo LOC102003444 vesicle transport through interaction with t-SNAREs homolog 1B pseudogene NW_004955478 11045244 11049588 + 102003444 AGCD01056157 MODEL 9061901 pseudo LOC102025974 60S ribosomal protein L7a pseudogene NW_004955453 596129 603760 + 102025974 AGCD01044596;XR_262760 MODEL 8983413 protein-coding Efna3 ephrin A3 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); negative regulation of angiogenesis (ortholog); positive regulation of amyloid precursor protein catabolic process (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis NW_004955545 1570351 1578610 + 102024852 AGCD01071860;AGCD01071861;GBBH01189460;XM_005411568;XM_005411570;XM_013508362;XM_013508363 XP_005411625;XP_005411627;XP_013363816;XP_013363817 MODEL 9053756 protein-coding Tagln3 transgelin 3 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN nucleus (ortholog); synapse (ortholog) NW_004955427 12412959 12426400 + 102024031 AGCD01027213;AGCD01027214;GBCB01053023;XM_013515214 XP_013370668 MODEL 9019833 protein-coding Intu inturned planar cell polarity protein ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN cilium assembly (ortholog); embryonic digit morphogenesis (ortholog); hair follicle morphogenesis (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955428 13670756 13743030 - 102008243 AGCD01027960;AGCD01027961;AGCD01027962;GBBH01048791;XM_005386749;XM_013515336;XM_013515337 XP_005386806;XP_013370790;XP_013370791 MODEL 8909288 protein-coding Bcl11a BCL11 transcription factor A ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to L-glutamate (ortholog); negative regulation of branching morphogenesis of a nerve (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); anxiety disorder (ortholog); apraxia (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nuclear body (ortholog) NW_004955424 23233523 23330679 + 102028770 AGCD01025009;AGCD01025010;AGCD01025011;AGCD01025012;GBDI01237635;XM_005385757;XM_013514702;XM_013514703;XM_013514704;XM_013514705;XM_013514707;XM_013514708;XM_013514709 XP_005385814;XP_013370156;XP_013370157;XP_013370158;XP_013370159;XP_013370161;XP_013370162;XP_013370163 MODEL 39133814 misc_rna 7SK 7SK RNA 8894356 protein-coding LOC102022067 putative olfactory receptor 10D4 NW_004955412 24714814 24715746 + 102022067 AGCD01013123;XM_005378635 XP_005378692 MODEL 8989903 protein-coding LOC102007848 olfactory receptor 4D1-like NW_004955451 4849254 4855277 - 102007848 AGCD01043143;AGCD01043144;GBDF01064574;XM_005394585 XP_005394642 MODEL 9054371 protein-coding Ppp1r13b protein phosphatase 1 regulatory subunit 13B INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of cellular process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Childhood Schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955538 2519765 2594769 - 102017603 AGCD01071128;AGCD01071129;GBDI01140082;XM_005410809;XM_005410811;XM_013507841;XM_013507842 XP_005410866;XP_005410868;XP_013363295;XP_013363296 MODEL 8770866 protein-coding Armc12 armadillo repeat containing 12 INVOLVED IN flagellated sperm motility (ortholog); positive regulation of cell growth (ortholog); sperm mitochondrial sheath assembly (ortholog); ASSOCIATED WITH melanoma (ortholog); prostate cancer (ortholog); spermatogenic failure 90 (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955437 3591343 3599887 + 102029899 AGCD01034326;GBBH01173802;XM_005389564;XM_005389565;XM_013516905 XP_005389621;XP_005389622;XP_013372359 MODEL 8766488 protein-coding Sim2 SIM bHLH transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN embryonic pattern specification (ortholog); lung development (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cleft palate (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 35828250 35869067 + 102018159 AGCD01007752;AGCD01007753;GBCE01094132;GBCQ01175819;XM_013504633 XP_013360087 MODEL 10364396 protein-coding LOC106147484 collagen alpha-1(I) chain-like NW_004955567 744459 745214 + 106147484 AGCD01074429;GBBH01210980;XM_013509303 XP_013364757 MODEL 8742731 protein-coding LOC102003815 vomeronasal type-2 receptor 116-like NW_004955563 73850 94496 - 102003815 AGCD01074040;AGCD01074041;AGCD01074042;XM_005413096 XP_005413153 MODEL 8771812 protein-coding Tjp1 tight junction protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); connexin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); adherens junction maintenance (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); bile duct cancer (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apical junction complex (ortholog) NW_004955416 28640807 28869717 + 102012321 AGCD01017634;AGCD01017635;AGCD01017636;AGCD01017637;AGCD01017638;GBDF01053729;XM_005381650;XM_005381653;XM_005381654;XM_005381656;XM_005381657 XP_005381707;XP_005381710;XP_005381711;XP_005381713;XP_005381714 MODEL 9027147 pseudo LOC102006703 cyclin-O pseudogene NW_004955515 1305213 1307829 + 102006703 AGCD01067223 MODEL 9018161 protein-coding Cox15 cytochrome c oxidase assembly factor COX15 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-CH group of donors (ortholog); INVOLVED IN cytochrome complex assembly (ortholog); heme A biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); cervical cancer (ortholog); FOUND IN cytochrome complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955507 5600605 5617556 - 102017801 AGCD01065680;GBDK01358382;XM_005407677 XP_005407734 MODEL 39134507 misc_rna 7SK 7SK RNA 8966762 protein-coding Sall2 spalt like transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein-containing complex binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eye development (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH coloboma (ortholog) NW_004955550 2236129 2250829 - 102014613 AGCD01072615;AGCD01072616;GBDF01045984;XM_005412122 XP_005412179 MODEL 9025630 protein-coding Slc22a6 solute carrier family 22 member 6 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); antiporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); metanephric proximal tubule development (ortholog); monoatomic anion transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH calcinosis (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955599 302026 307503 + 102003713 AGCD01076637;GBCQ01008752;XM_005414753;XM_013510035 XP_005414810;XP_013365489 MODEL 10282773 protein-coding LOC106147485 uncharacterized LOC106147485 NW_004955567 428690 441840 - 106147485 AGCD01074404;GBDK01233099;XM_013509305;XM_013509306;XM_013509307 XP_013364759;XP_013364760;XP_013364761 MODEL 8742476 protein-coding Tspan13 tetraspanin 13 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN regulation of calcium ion transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 19971216 19979923 + 102021637 AGCD01011039;GBBH01095569;XM_013510494 XP_013365948 MODEL 39131720 rrna 5S_rRNA 5S ribosomal RNA 39132395 rrna 5S_rRNA 5S ribosomal RNA 8947664 protein-coding Chrna9 cholinergic receptor nicotinic alpha 9 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH lung small cell carcinoma (ortholog); Neoplastic Cell Transformation (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); plasma membrane (ortholog) NW_004955443 7148604 7157824 - 102018865 AGCD01038273;GBBH01074482;XM_013518117 XP_013373571 MODEL 8740920 protein-coding LOC102009376 olfactory receptor 13J1 NW_004955472 452846 454056 + 102009376 AGCD01053339;XM_005401175 XP_005401232 MODEL 8946454 ncrna LOC102011319 uncharacterized LOC102011319 NW_004955484 8530719 8557626 + 102011319 AGCD01058391;AGCD01058392;AGCD01058393;GBDF01038957;XR_263894 MODEL 8912229 protein-coding Xpo1 exportin 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); nuclear export signal receptor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to salt (ortholog); cellular response to triglyceride (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; Hedgehog signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); atrial fibrillation (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955424 22370006 22420568 + 102022407 AGCD01024966;AGCD01024967;GBDF01082052;XM_005385738;XM_005385739 XP_005385795;XP_005385796 MODEL 8841728 protein-coding Ccl15 C-C motif chemokine ligand 15 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); INVOLVED IN positive regulation of inflammatory response (ortholog); ASSOCIATED WITH calcinosis (ortholog); Experimental Liver Cirrhosis (ortholog); heart valve disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955481 10350128 10352556 - 102024008 AGCD01057143;GBDI01326596;XM_005402901;XM_005402902 XP_005402958;XP_005402959 MODEL 8923499 protein-coding Ptpn13 protein tyrosine phosphatase non-receptor type 13 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cellular response to toxic substance (ortholog); negative regulation of excitatory synapse assembly (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) NW_004955474 2988109 3140520 - 102019164 AGCD01054318;AGCD01054319;AGCD01054320;AGCD01054321;AGCD01054322;GBDI01182369;XM_005401347;XM_005401348;XM_005401349;XM_005401354;XM_013502736;XM_013502737;XM_013502738;XM_013502739;XM_013502740;XM_013502741;XM_013502742;XM_013502743;XM_013502744 XP_005401404;XP_005401405;XP_005401406;XP_005401411;XP_013358190;XP_013358191;XP_013358192;XP_013358193;XP_013358194;XP_013358195;XP_013358196;XP_013358197;XP_013358198 MODEL 8935538 protein-coding Rgs9bp regulator of G protein signaling 9 binding protein INVOLVED IN detection of light stimulus involved in visual perception (ortholog); photoresponse recovery (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH bradyopsia (ortholog); bradyopsia 2 (ortholog); FOUND IN photoreceptor outer segment (ortholog) NW_004955468 5311318 5313612 - 102030513 AGCD01051963;GBCQ01162978;XM_005400087 XP_005400144 MODEL 8721704 ncrna LOC102005589 uncharacterized LOC102005589 NW_004955415 23433810 23434272 + 102005589 AGCD01016554;GBDF01207363;XR_260313 MODEL 8730876 protein-coding Cul4a cullin 4A ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955404 583261 617914 - 102014001 AGCD01003203;AGCD01003204;GBDK01143401;XM_013515570 XP_013371024 MODEL 9016895 protein-coding Exosc8 exosome component 8 ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) NW_004955431 9048210 9058079 - 102024367 AGCD01030154;GBDF01085255;XM_005387665;XM_005387666 XP_005387722;XP_005387723 MODEL 8765301 protein-coding LOC102025254 olfactory receptor 2A1/2A42-like NW_004955491 466262 467182 + 102025254 AGCD01060336;XM_005404883 XP_005404940 MODEL 8772405 protein-coding LOC102022072 collagen alpha-1(I) chain-like NW_004955471 2601321 2604050 + 102022072 AGCD01053023;AGCD01053024;GBDF01078910;XM_013522883 XP_013378337 MODEL 8819699 protein-coding Dcun1d5 defective in cullin neddylation 1 domain containing 5 ENCODES a protein that exhibits cullin family protein binding (ortholog); NEDD8 transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of protein neddylation (ortholog); regulation of cell growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); spindle (ortholog) NW_004955412 6185858 6217935 - 102019154 AGCD01012666;AGCD01012667;AGCD01012668;GBCB01021113;XM_005377993 XP_005378050 MODEL 39131348 protein-coding RAP2B RAP2B, member of RAS oncogene family 8933938 protein-coding Lrriq1 leucine rich repeats and IQ motif containing 1 INVOLVED IN apoptotic process (ortholog); gene expression (ortholog); single fertilization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955405 23004726 23245774 + 102004886 AGCD01005116;AGCD01005117;AGCD01005118;AGCD01005119;AGCD01005120;AGCD01005121;AGCD01005122;GBDF01120031;XM_013518073;XM_013518074;XM_013518081;XM_013518086;XM_013518087;XM_013518090;XM_013518092;XM_013518100;XM_013518105;XM_013518106;XM_013518110 XP_013373527;XP_013373528;XP_013373535;XP_013373540;XP_013373541;XP_013373544;XP_013373546;XP_013373554;XP_013373559;XP_013373560;XP_013373564 MODEL 730469123 snorna SNORA61 Small nucleolar RNA SNORA61 8996108 protein-coding Elp5 elongator acetyltransferase complex subunit 5 INVOLVED IN positive regulation of cell migration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955467 9654532 9660035 - 102024204 AGCD01051520;GBDF01005053;XM_005399532;XM_005399533;XM_005399534;XM_013522088 XP_005399589;XP_005399590;XP_005399591;XP_013377542 MODEL 8869370 protein-coding LOC102006320 TERF1-interacting nuclear factor 2 NW_004955409 36120339 36165515 + 102006320 AGCD01010445;AGCD01010446;AGCD01010447;AGCD01010448;AGCD01010449;AGCD01010450;GBDF01003589;XM_005377026;XM_005377027;XM_013510401 XP_005377083;XP_005377084;XP_013365855 MODEL 8938220 ncrna LOC102012610 uncharacterized LOC102012610 NW_004955407 39310523 39313107 + 102012610 AGCD01007824;GBBH01151673;XR_259626 MODEL 8785200 protein-coding LOC102018763 uncharacterized LOC102018763 NW_004955527 8085 9252 + 102018763 AGCD01069371;GBDF01002839;XM_013507372 XP_013362826 MODEL 8886290 ncrna LOC102005256 uncharacterized LOC102005256 NW_004955481 2964634 3031561 - 102005256 AGCD01056891;GBDF01045486;XR_001230937;XR_263772 MODEL 8747246 protein-coding Efna4 ephrin A4 ENCODES a protein that exhibits ephrin receptor binding (ortholog) NW_004955545 1557107 1561234 + 102024509 AGCD01071859;GBDF01210187;XM_005411567 XP_005411624 MODEL 9056455 protein-coding Dgke diacylglycerol kinase epsilon ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); atypical hemolytic-uremic syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955451 5966773 5988004 - 102013367 AGCD01043194;GBDF01052985;GBDF01154242;XM_005394069 XP_005394126 MODEL 8932136 protein-coding Camk2d calcium/calmodulin dependent protein kinase II delta ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cardiac muscle cell contraction (ortholog); cardiac muscle contraction (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Cafe-au-Lait Spots (ortholog); FOUND IN axon initial segment (ortholog); calcium- and calmodulin-dependent protein kinase complex (ortholog); cochlear hair cell ribbon synapse (ortholog) NW_004955428 25583501 25880395 + 102003472 AGCD01028289;AGCD01028290;GBCB01042196;XM_005386817;XM_005386818;XM_005386824;XM_005386825;XM_005386831;XM_005386832;XM_005386834;XM_005386836;XM_013515306;XM_013515307;XM_013515308 XP_005386874;XP_005386875;XP_005386881;XP_005386882;XP_005386888;XP_005386889;XP_005386891;XP_005386893;XP_013370760;XP_013370761;XP_013370762 MODEL 9065540 protein-coding LOC102029878 cell cycle control protein 50A NW_004955502 3769453 3798364 - 102029878 AGCD01064321;AGCD01064322;GBCC01027114;XM_005406895 XP_005406952 MODEL 10350235 protein-coding Duxb double homeobox B NW_004955510 120981 140525 + 106146973 AGCD01066138;AGCD01066139;GBDF01221746;XM_013506306 XP_013361760 MODEL 9066226 protein-coding Armc2 armadillo repeat containing 2 INVOLVED IN cell morphogenesis (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955411 33921459 34021375 + 102013266 AGCD01012376;AGCD01012377;GBBH01117983;XM_005377849;XM_005377850 XP_005377906;XP_005377907 MODEL 39132023 snorna SNORD61 Small nucleolar RNA SNORD61 8742145 pseudo LOC102012984 small acidic protein-like NW_004955428 6319241 6325753 + 102012984 AGCD01027734 MODEL 8810733 protein-coding Foxn2 forkhead box N2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955441 14882312 14950878 + 102019854 AGCD01037230;AGCD01037231;AGCD01037232;AGCD01037233;AGCD01037234;AGCD01037235;GBDI01164952;XM_005390995;XM_005390997;XM_005390998;XM_013517612;XM_013517613 XP_005391052;XP_005391054;XP_005391055;XP_013373066;XP_013373067 MODEL 8743414 protein-coding Rab1a RAB1A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cell migration (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); dilated cardiomyopathy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955424 19393589 19421373 + 102004180 AGCD01024821;AGCD01024822;AGCD01024823;AGCD01024824;AGCD01024825;GBDF01051813;XM_005385692 XP_005385749 MODEL 8781993 protein-coding Slc22a7 solute carrier family 22 member 7 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); secondary active transmembrane transporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); prostaglandin transport (ortholog); response to stilbenoid (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955437 9204414 9210350 + 102007276 AGCD01034522;GBDJ01341934;XM_005389765 XP_005389822 MODEL 39133493 snrna U4 U4 spliceosomal RNA 8786141 protein-coding Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); astrocyte fate commitment (ortholog); basophil differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); lymphoid leukemia (ortholog); T-cell acute lymphoblastic leukemia (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955464 11304611 11317420 + 102030163 AGCD01050143;AGCD01050144;GBBH01209848;XM_013521747;XM_013521748;XM_013521749 XP_013377201;XP_013377202;XP_013377203 MODEL 9017805 protein-coding Ccl16 C-C motif chemokine ligand 16 ENCODES a protein that exhibits chemoattractant activity (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog) NW_004955481 10332022 10334781 - 102023034 AGCD01057142;GBDI01141085;XM_005415289 XP_005415346 MODEL 8870438 protein-coding Polr1g RNA polymerase I subunit G INVOLVED IN rRNA transcription (ortholog); transcription elongation by RNA polymerase I (ortholog); transcription initiation at RNA polymerase I promoter (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); multiple myeloma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955555 2389569 2393410 + 102013014 AGCD01073149;GBDF01040878;XM_005412525;XM_013508708 XP_005412582;XP_013364162 MODEL 10345860 ncrna LOC106147487 uncharacterized LOC106147487 NW_004955567 817228 820682 + 106147487 AGCD01074433;AGCD01074434;GBDF01016436;XR_001232414;XR_001232415;XR_001232416;XR_001232417 MODEL 9031589 pseudo LOC102003820 40S ribosomal protein S16 pseudogene NW_004955579 331808 332248 - 102003820 AGCD01075545 MODEL 8884648 protein-coding Simc1 SUMO interacting motifs containing 1 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); SUMO polymer binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); PML body (ortholog) NW_004955408 28562372 28630420 + 102009467 AGCD01008716;AGCD01008717;AGCD01008718;AGCD01008719;AGCD01008720;AGCD01008721;GBDF01002279;XM_005376371;XM_005376372 XP_005376428;XP_005376429 MODEL 9018296 protein-coding Ppp1r13l protein phosphatase 1 regulatory subunit 13 like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cardiac right ventricle morphogenesis (ortholog); embryonic camera-type eye development (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH ARRHYTHMOGENIC CARDIOMYOPATHY WITH VARIABLE ECTODERMAL ABNORMALITIES (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); autosomal recessive disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955555 2373088 2390973 - 102022549 AGCD01073148;AGCD01073149;GBCE01005109;GBCQ01038365;XM_013508705;XM_013508706;XM_013508707 XP_013364159;XP_013364160;XP_013364161 MODEL 10324511 protein-coding LOC106148573 translation initiation factor IF-2-like NW_004955424 21145345 21153437 + 106148573 AGCD01024895;GBBH01167913;XM_013514592 XP_013370046 MODEL 8838018 protein-coding LOC102006704 type-1 protein phosphatase inhibitor 4-like NW_004955516 5498178 5498969 + 102006704 AGCD01067562;GBDF01004265;XM_005409000 XP_005409057 MODEL 8832926 protein-coding LOC102010535 protein FAM47A-like NW_004955587 258217 259881 - 102010535 AGCD01076061;GBDF01017135;XM_005414446 XP_005414503 MODEL 9035010 ncrna LOC102025255 uncharacterized LOC102025255 NW_004955422 16465199 16472125 + 102025255 AGCD01022898;GBCE01047979;XR_260891 MODEL 9035728 ncrna LOC102024158 uncharacterized LOC102024158 NW_004955435 18613685 18623159 + 102024158 AGCD01033408;GBDF01076618;XR_261722 MODEL 8763412 protein-coding COX2 cytochrome c oxidase subunit II MT 7018 7701 + 15822227 JX312692 AFQ55780;YP_008080748 REVIEWED 8721613 ncrna LOC102003450 uncharacterized LOC102003450 NW_004955485 6812985 6814556 - 102003450 AGCD01058629;GBDF01041975;XR_263914 MODEL 39132792 snorna SNORD62 Small nucleolar RNA SNORD62 9009179 protein-coding Sall3 spalt like transcription factor 3 INVOLVED IN forelimb morphogenesis (ortholog); hindlimb morphogenesis (ortholog); negative regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Burkitt lymphoma (ortholog); cervical cancer (ortholog) NW_004955402 62157988 62163977 + 102022445 AGCD01001636;GBCQ01019586;XM_005373104 XP_005373161 MODEL 39132397 rrna 5S_rRNA 5S ribosomal RNA 8927285 ncrna LOC102006322 uncharacterized LOC102006322 NW_004955463 8147644 8156564 - 102006322 AGCD01049756;GBDF01286788;XR_263161 MODEL 39133815 misc_rna 7SK 7SK RNA 8715523 ncrna LOC102012988 uncharacterized LOC102012988 NW_004955429 20903019 20922730 - 102012988 AGCD01028992;GBDF01263063;XR_261369 MODEL 8926236 protein-coding Chrnb1 cholinergic receptor nicotinic beta 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); monoatomic cation transport (ortholog); muscle cell development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH apraxia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) NW_004955467 9471962 9482370 - 102013271 AGCD01051513;GBCB01005969;XM_005399490;XM_005399491;XM_005399492;XM_005399493;XM_005399494;XM_013522232;XM_013522233 XP_005399547;XP_005399548;XP_005399549;XP_005399550;XP_005399551;XP_013377686;XP_013377687 MODEL 8811919 ncrna LOC102009377 uncharacterized LOC102009377 NW_004955474 7388629 7400816 + 102009377 AGCD01054519;GBDF01303398;XR_001230720;XR_263601 MODEL 9026158 ncrna LOC102011320 uncharacterized LOC102011320 NW_004955485 7682452 7684730 - 102011320 AGCD01058670;GBCB01006341;XR_263922 MODEL 8920249 protein-coding LOC102005257 zinc finger protein 14-like NW_004955417 31483286 31502861 - 102005257 AGCD01018652;AGCD01018653;GBBH01203101;XM_005381973 XP_005382030 MODEL 8833789 protein-coding Ptpn14 protein tyrosine phosphatase non-receptor type 14 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN lymphangiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of protein export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 3368833 3463170 + 102012155 AGCD01005671;AGCD01005672;GBCE01077552;XM_005374719;XM_013519964 XP_005374776;XP_013375418 MODEL 8811883 ncrna LOC102005590 uncharacterized LOC102005590 NW_004955479 2051181 2061238 - 102005590 AGCD01056261;GBDF01038985;XR_001230885;XR_001230886 MODEL 8913825 protein-coding Cul4b cullin 4B ENCODES a protein that exhibits damaged DNA binding (ortholog); ubiquitin ligase complex scaffold activity (ortholog); INVOLVED IN astrocyte differentiation (ortholog); gene expression (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); allergic contact dermatitis (ortholog); amblyopia (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) NW_004955572 1308491 1365147 + 102003816 AGCD01074949;GBDF01160515;XM_005413656;XM_005413657;XM_005413658;XM_005413659;XM_013509444 XP_005413713;XP_005413714;XP_005413715;XP_005413716;XP_013364898 MODEL 8766057 protein-coding LOC102025975 lymphocyte antigen 6F NW_004955454 1875022 1878705 + 102025975 AGCD01044991;GBDF01043166;XM_005395755 XP_005395812 MODEL 8962504 protein-coding Tjp2 tight junction protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); homotypic cell-cell adhesion (ortholog); intestinal absorption (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant nonsyndromic deafness 51 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955434 3781368 3923240 - 102005497 AGCD01032143;AGCD01032144;AGCD01032145;AGCD01032146;AGCD01032147;AGCD01032148;GBCE01075388;GBDJ01089898;XM_005388570;XM_013516340 XP_005388627;XP_013371794 MODEL 8975562 protein-coding Bcl11b BCL11 transcription factor B ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); axonogenesis (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN neuron projection (ortholog); nucleus (ortholog); SWI/SNF complex (ortholog) NW_004955438 20562345 20637662 - 102016750 AGCD01035516;AGCD01035517;GBDJ01172501;XM_005390451 XP_005390508 MODEL 39134508 misc_rna 7SK 7SK RNA 8983196 protein-coding Exosc9 exosome component 9 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN mRNA catabolic process (ortholog); nuclear mRNA surveillance (ortholog); nuclear polyadenylation-dependent rRNA catabolic process (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); blepharophimosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) NW_004955428 18732733 18743743 - 102018750 AGCD01028069;GBDI01225849;XM_005386784 XP_005386841 MODEL 8938453 pseudo LOC102022076 serine/arginine-rich splicing factor 10 pseudogene NW_004955415 23017572 23021966 + 102022076 AGCD01016549 MODEL 8853456 protein-coding Rap2b RAP2B, member of RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); negative regulation of cell migration (ortholog); platelet activation (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell contact zone (ortholog); cytosol (ortholog) NW_004955448 4668477 4671629 + 102011822 AGCD01041350;AGCD01041351;GBCE01118185;GBDJ01276338;XM_005393055 XP_005393112 MODEL 8801573 protein-coding Dvl1 dishevelled segment polarity protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); frizzled binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN axon (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955486 9464390 9469984 + 102024343 AGCD01059187;GBBH01061708;GBBH01061716;XM_013504189 XP_013359643 MODEL 39131721 rrna 5S_rRNA 5S ribosomal RNA 730469085 snorna SNORA61 Small nucleolar RNA SNORA61 10347550 protein-coding LOC106148574 translation initiation factor IF-2-like NW_004955424 22701696 22702498 - 106148574 AGCD01024980;GBDF01026792;GBDF01306472;XM_013514593 XP_013370047 MODEL 9054309 protein-coding Elp6 elongator acetyltransferase complex subunit 6 INVOLVED IN apoptotic process (ortholog); autophagosome maturation (ortholog); autophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955420 24795416 24807790 + 102013177 AGCD01021332;AGCD01021333;GBDF01253292;XM_005383396;XM_005383397;XM_005383398;XM_005383399 XP_005383453;XP_005383454;XP_005383455;XP_005383456 MODEL 8821925 pseudo LOC102012616 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like NW_004955410 34241134 34241470 - 102012616 AGCD01011399 MODEL 9020399 protein-coding LOC102025258 taste receptor type 2 member 143-like NW_004955494 228691 229575 - 102025258 AGCD01061370;XM_005405524 XP_005405581 MODEL 9053416 ncrna LOC102007849 uncharacterized LOC102007849 NW_004955452 2488589 2501328 + 102007849 AGCD01043896;GBDJ01336024;XR_001236017 MODEL 8821895 protein-coding Xpo4 exportin 4 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of protein export from nucleus (ortholog); protein export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955497 1562945 1661379 - 102012451 AGCD01062465;AGCD01062466;GBDJ01386012;XM_005406312;XM_005406313;XM_013505464 XP_005406369;XP_005406370;XP_013360918 MODEL 39133494 snrna U4 U4 spliceosomal RNA 8988418 protein-coding Rgsl1 regulator of G protein signaling like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 21274546 21395534 + 102016666 AGCD01006121;AGCD01006122;AGCD01006123;AGCD01006124;AGCD01006125;AGCD01006126;AGCD01006127;GBDF01194182;GBDF01194183;XM_013521438 XP_013376892 MODEL 9015848 protein-coding Efna5 ephrin A5 ENCODES a protein that exhibits chemorepellent activity (ortholog); ephrin receptor binding (ortholog); neurotrophin TRKB receptor binding (ortholog); INVOLVED IN apoptotic process (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH anencephaly (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); cell periphery (ortholog) NW_004955418 6919270 7188561 + 102021764 AGCD01018883;AGCD01018884;AGCD01018885;GBDJ01318639;XM_005382179 XP_005382236 MODEL 8706334 pseudo LOC102029879 40S ribosomal protein S12-like NW_004955426 3752953 3753829 - 102029879 AGCD01026083 MODEL 8993330 protein-coding Camk2g calcium/calmodulin dependent protein kinase II gamma ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN calcium ion transport (ortholog); G1/S transition of mitotic cell cycle (ortholog); protein autophosphorylation (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; N-cadherin signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 59 (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); glutamatergic synapse (ortholog); postsynaptic cytosol (ortholog) NW_004955437 18036614 18089876 + 102007467 AGCD01034774;GBCB01006648;GBDJ01011605;XM_013516755 XP_013372209 MODEL 8713810 protein-coding Dcx doublecortin ENCODES a protein that exhibits microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN axon extension (ortholog); brain development (ortholog); central nervous system projection neuron axonogenesis (ortholog); ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); alcohol use disorder (ortholog); Ataxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955490 4354307 4469055 + 102004827 AGCD01060187;AGCD01060188;XM_005404644;XM_005404645 XP_005404701;XP_005404702 MODEL 8727981 protein-coding Tspan14 tetraspanin 14 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); tetraspanin-enriched microdomain (ortholog) NW_004955510 463548 490635 + 102028319 AGCD01066149;AGCD01066150;GBDJ01088086;XM_005407874 XP_005407931 MODEL 8973230 protein-coding Armc3 armadillo repeat containing 3 INVOLVED IN flagellated sperm motility (ortholog); ribophagy (ortholog); spermatid development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955429 5949180 6050690 - 102015872 AGCD01028538;AGCD01028539;AGCD01028540;AGCD01028541;GBDK01193407;XM_005386929;XM_005386930;XM_013515510;XM_013515511;XM_013515512 XP_005386986;XP_005386987;XP_013370964;XP_013370965;XP_013370966 MODEL 8712034 protein-coding Cul5 cullin 5 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cell migration (ortholog); cerebral cortex radially oriented cell migration (ortholog); negative regulation of focal adhesion assembly (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); Breast Neoplasms (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955412 10266072 10336156 + 102014031 AGCD01012764;AGCD01012765;AGCD01012766;GBDF01053200;XM_013510972 XP_013366426 MODEL 8739342 ncrna LOC102006708 uncharacterized LOC102006708 NW_004955437 17938818 17949903 - 102006708 AGCD01034764;AGCD01034765;XR_001235038;XR_261890 MODEL 8886605 ncrna LOC102018765 uncharacterized LOC102018765 NW_004955533 928041 929816 - 102018765 AGCD01070335;GBCB01020311;XR_264741 MODEL 39132796 snorna SNORD62 Small nucleolar RNA SNORD62 9000819 protein-coding Foxn3 forkhead box N3 INVOLVED IN craniofacial suture morphogenesis (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955438 11720563 12126185 - 102009421 AGCD01035247;AGCD01035248;AGCD01035249;AGCD01035250;AGCD01035251;AGCD01035252;AGCD01035253;GBDI01173345;XM_005390270;XM_005390271;XM_005390273;XM_013517169 XP_005390327;XP_005390328;XP_005390330;XP_013372623 MODEL 8756845 ncrna LOC102012991 uncharacterized LOC102012991 NW_004955431 707760 745153 - 102012991 AGCD01029876;AGCD01029877;AGCD01029878;GBDF01223749;XR_261438;XR_261439 MODEL 9057252 protein-coding Sall4 spalt like transcription factor 4 INVOLVED IN embryonic limb morphogenesis (ortholog); gene expression (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); congenital heart disease (ortholog); FOUND IN heterochromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 6824797 6841141 + 102017823 AGCD01039521;AGCD01039522;GBDF01028383;XM_005392290 XP_005392347 MODEL 8814696 protein-coding Tal2 TAL bHLH transcription factor 2 INVOLVED IN midbrain development (ortholog); multicellular organism growth (ortholog); post-embryonic development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog) NW_004955419 20899292 20907288 - 102027073 AGCD01020257;GBDI01174310;XM_005382772;XM_005382773;XM_005382774;XM_005382775;XM_013513293 XP_005382829;XP_005382830;XP_005382831;XP_005382832;XP_013368747 MODEL 8813589 protein-coding Chrnb2 cholinergic receptor nicotinic beta 2 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); associative learning (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dopaminergic synapse (ortholog) NW_004955545 1065457 1077056 + 102014086 AGCD01071836;GBDF01025054;XM_005411526 XP_005411583 MODEL 8703055 protein-coding Polr1h RNA polymerase I subunit H INVOLVED IN transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Experimental Neoplasms (ortholog); Stomach Neoplasms (ortholog); FOUND IN fibrillar center (ortholog); RNA polymerase I complex (ortholog) NW_004955583 191252 195563 + 102010006 AGCD01075801;AGCD01075802;GBDF01080016;XM_005414292;XM_005414293 XP_005414349;XP_005414350 MODEL 8790356 protein-coding LOC102003821 HLA class I histocompatibility antigen, B-14 alpha chain-like NW_004955583 520916 524888 + 102003821 AGCD01075833;AGCD01075834;GBBH01118053;XM_013509777 XP_013365231 MODEL 8924299 protein-coding Sin3a SIN3 transcription regulator family member A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to dopamine (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN DNA modification pathway; Hedgehog signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); APLASIA/HYPOPLASIA INVOLVING BONES OF THE LOWER LIMBS (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN chromatin (ortholog); histone deacetylase complex (ortholog); kinetochore (ortholog) NW_004955450 2804551 2870450 + 102027592 AGCD01042407;AGCD01042408;AGCD01042409;AGCD01042410;GBDI01010558;XM_005393507;XM_013518961 XP_005393564;XP_013374415 MODEL 8764787 protein-coding Lrriq3 leucine rich repeats and IQ motif containing 3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955423 18438848 18585627 + 102029411 AGCD01023873;AGCD01023874;AGCD01023875;AGCD01023876;GBDF01053937;XM_013514453;XM_013514454 XP_013369907;XP_013369908 MODEL 8744226 protein-coding Invs inversin INVOLVED IN animal organ development (ortholog); embryonic heart tube left/right pattern formation (ortholog); epithelial cilium movement involved in determination of left/right asymmetry (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ciliary base (ortholog); ciliary inversin compartment (ortholog); cilium (ortholog) NW_004955419 25445404 25584244 - 102011666 AGCD01020385;AGCD01020386;AGCD01020387;AGCD01020388;GBDF01113701;XM_005382808;XM_005382810;XM_013513189 XP_005382865;XP_005382867;XP_013368643 MODEL 9053767 pseudo LOC102024160 nuclear receptor-binding factor 2-like NW_004955435 9380995 9387375 - 102024160 AGCD01033048;AGCD01033049 MODEL 39134509 misc_rna 7SK 7SK RNA 8798962 protein-coding COX3 cytochrome c oxidase subunit III MT 8612 9395 + 15822208 JX312692 AFQ55783;YP_008080751 REVIEWED 8999385 protein-coding Exph5 exophilin 5 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN keratinocyte development (ortholog); multivesicular body sorting pathway (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH epidermolysis bullosa (ortholog); Epidermolysis Bullosa Simplex 4, Localized or Generalized Intermediate, Autosomal Recessive (ortholog); esophageal cancer (ortholog); FOUND IN endosome (ortholog) NW_004955412 10604853 10674683 - 102006643 AGCD01012773;AGCD01012774;AGCD01012775;GBBH01182424;XM_005378040;XM_013511189;XM_013511191 XP_005378097;XP_013366643;XP_013366645 MODEL 8830182 protein-coding Bcl2 BCL2 apoptosis regulator ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); channel activity (ortholog); INVOLVED IN actin filament organization (ortholog); animal organ morphogenesis (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN ceramide signaling pathway; erythropoietin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN BAD-BCL-2 complex (ortholog); BCL-2 complex (ortholog); cytoplasm (ortholog) NW_004955402 46911125 47084214 - 102022347 AGCD01001169;AGCD01001170;GBCB01075663;XM_013511218 XP_013366672 MODEL 8970631 ncrna LOC102003456 uncharacterized LOC102003456 NW_004955492 6404109 6413616 + 102003456 AGCD01060766;GBDF01016640;XR_001231259;XR_001231260;XR_264055 MODEL 39132093 snorna SNORA61 Small nucleolar RNA SNORA61 39133816 misc_rna 7SK 7SK RNA 8815011 pseudo LOC102009380 40S ribosomal protein S8 pseudogene NW_004955415 27385133 27385744 + 102009380 AGCD01016630 MODEL 9023550 ncrna LOC102011323 uncharacterized LOC102011323 NW_004955422 1718157 1721300 + 102011323 AGCD01022470;GBDF01161787;XR_260843 MODEL 9021303 ncrna LOC102012627 uncharacterized LOC102012627 NW_004955414 6716037 6849197 - 102012627 AGCD01014930;AGCD01014931;AGCD01014932;AGCD01014933;AGCD01014934;AGCD01014935;AGCD01014936;AGCD01014937;AGCD01014938;AGCD01014939;AGCD01014940;GBDK01105428;XR_001233085;XR_001233086;XR_001233087;XR_001233088;XR_001233089;XR_001233090;XR_001233091;XR_001233092;XR_001233093;XR_260159;XR_260161 MODEL 9022696 ncrna LOC102005258 uncharacterized LOC102005258 NW_004955481 9167420 9182478 - 102005258 AGCD01057096;GBDF01041181;XR_263795 MODEL 10343503 protein-coding Ccl17 C-C motif chemokine ligand 17 ENCODES a protein that exhibits CCR4 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); negative regulation of myoblast differentiation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic bronchopulmonary aspergillosis (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955433 15052616 15054732 + 106146250 AGCD01031745;GBDI01261696;XM_013516202 XP_013371656 MODEL 39133495 snrna U4 U4 spliceosomal RNA 8834839 protein-coding Ppp1r14a protein phosphatase 1 regulatory inhibitor subunit 14A INVOLVED IN cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Mesothelioma (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955468 1174946 1179289 + 102019585 AGCD01051760;GBCE01159119;XM_005399866 XP_005399923 MODEL 9009387 protein-coding LOC102005594 olfactory receptor 1L6-like NW_004955419 5236631 5237566 - 102005594 AGCD01019793;XM_005382523 XP_005382580 MODEL 8835382 ncrna LOC102010538 uncharacterized LOC102010538 NW_004955403 1911461 1914126 - 102010538 AGCD01001726;GBDF01042347;XR_259133 MODEL 8803863 pseudo LOC102025976 zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene NW_004955406 34227276 34229189 - 102025976 AGCD01006498 MODEL 8828160 pseudo LOC102012993 RING1 and YY1-binding protein pseudogene NW_004955432 3966376 3967076 + 102012993 AGCD01030683 MODEL 8782942 protein-coding Efnb1 ephrin B1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); embryonic pattern specification (ortholog); nervous system development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cholangiocarcinoma (ortholog); craniofrontonasal syndrome (ortholog); craniosynostosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955475 8360504 8372431 + 102015627 AGCD01055040;GBCQ01070936;XM_005401594 XP_005401651 MODEL 8908573 ncrna LOC102022080 uncharacterized LOC102022080 NW_004955480 10241219 10313855 - 102022080 AGCD01056760;AGCD01056761;AGCD01056762;AGCD01056763;GBDF01121481;XR_263752 MODEL 9048278 protein-coding Rap2c RAP2C, member of RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); negative regulation of cell migration (ortholog); Rap protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell contact zone (ortholog); cytoplasm (ortholog) NW_004955473 2709407 2723453 + 102028409 AGCD01053907;GBBH01011809;GBDF01235018;XM_005401215 XP_005401272 MODEL 8716185 protein-coding Polr2a RNA polymerase II subunit A ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to oxygen levels (ortholog); DNA-templated transcription termination (ortholog); positive regulation of RNA splicing (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 9423540 9447530 - 102011523 AGCD01051511;GBCQ01005514;XM_005399484 XP_005399541 MODEL 8711447 protein-coding Rab1b RAB1B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); establishment of endothelial intestinal barrier (ortholog); Golgi organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955422 19039741 19047088 - 102017133 AGCD01022973;GBDJ01003487;XM_005384425 XP_005384482 MODEL 8901704 protein-coding Slc22a8 solute carrier family 22 member 8 ENCODES a protein that exhibits antiporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); protein kinase C binding (ortholog); INVOLVED IN glutathione transport (ortholog); prostaglandin transport (ortholog); quaternary ammonium group transport (ortholog); PARTICIPATES IN ibuprofen pharmacodynamics pathway; ibuprofen pharmacokinetics pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); Human Influenza (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955599 284038 299603 + 102002974 AGCD01076637;GBDF01062374;XM_005414750;XM_005414751;XM_005414752 XP_005414807;XP_005414808;XP_005414809 MODEL 8747472 protein-coding LOC102006323 testis-specific Y-encoded-like protein 1 NW_004955464 13241650 13244996 - 102006323 AGCD01050265;XM_013521580 XP_013377034 MODEL 10329514 protein-coding LOC106148575 beta-defensin 1-like NW_004955403 53920320 53922803 + 106148575 AGCD01003081;XM_013514594 XP_013370048 MODEL 8994561 protein-coding LOC102025259 spermatogenesis-associated protein 31E1-like NW_004955422 23945051 23950044 - 102025259 AGCD01023211;GBDF01157943;GBDF01250244;XM_005384977 XP_005385034 MODEL 8794002 protein-coding Elspbp1 epididymal sperm binding protein 1 ASSOCIATED WITH colorectal cancer (ortholog); uterine carcinosarcoma (ortholog) NW_004955609 227424 241987 - 102011266 AGCD01077054;XM_005414929;XM_013510121 XP_005414986;XP_013365575 MODEL 8980737 protein-coding Dgkg diacylglycerol kinase gamma ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955420 21296515 21481651 + 102007235 AGCD01021134;AGCD01021135;AGCD01021136;AGCD01021137;AGCD01021138;GBBH01017583;XM_005383282;XM_005383283;XM_005383284 XP_005383339;XP_005383340;XP_005383341 MODEL 8897956 pseudo LOC102007851 cyclin-G1 pseudogene NW_004955404 47890555 47891422 - 102007851 AGCD01004488 MODEL 8726727 protein-coding Ptpn18 protein tyrosine phosphatase non-receptor type 18 ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955459 65191 90459 + 102012407 AGCD01047924;GBDK01194260;XM_005397542;XM_005397543;XM_005397544 XP_005397599;XP_005397600;XP_005397601 MODEL 8848071 protein-coding Rhag Rh associated glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); carbon dioxide transmembrane transport (ortholog); carbon dioxide transport (ortholog); ASSOCIATED WITH developmental dysplasia of the hip (ortholog); hemolytic anemia (ortholog); Hepatomegaly (ortholog); FOUND IN ankyrin-1 complex (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955411 8335223 8354430 + 102006754 AGCD01011727;GBBH01082480;XM_005377673 XP_005377730 MODEL 8732988 protein-coding Xpo5 exportin 5 ENCODES a protein that exhibits mRNA binding (ortholog); nuclear export signal receptor activity (ortholog); pre-miRNA binding (ortholog); INVOLVED IN pre-miRNA export from nucleus (ortholog); protein export from nucleus (ortholog); PARTICIPATES IN microRNA pathway; ribosome biogenesis pathway; ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955437 9351045 9392396 - 102011478 AGCD01034527;AGCD01034528;GBDF01048032;XM_005389780;XM_013516820;XM_013516821 XP_005389837;XP_013372274;XP_013372275 MODEL 8932620 ncrna LOC102029884 uncharacterized LOC102029884 NW_004955429 18972955 18975913 - 102029884 AGCD01028930;GBDK01028808;XR_001234468;XR_001234469;XR_261363 MODEL 8982899 protein-coding Tjp3 tight junction protein 3 INVOLVED IN regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) NW_004955495 5620817 5647211 + 102007672 AGCD01062015;AGCD01062016;AGCD01062017;GBBH01087934;XM_005405882;XM_005405883;XM_013505215 XP_005405939;XP_005405940;XP_013360669 MODEL 8854801 protein-coding Ccl19 C-C motif chemokine ligand 19 ENCODES a protein that exhibits CCR chemokine receptor binding (ortholog); CCR10 chemokine receptor binding (ortholog); CCR7 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); CCL19-activated CCR7 signaling pathway (ortholog); cell maturation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); allergic disease (ortholog); aspergillosis (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955472 1444598 1446488 + 102019796 AGCD01053393;GBCE01155917;XM_005401043 XP_005401100 MODEL 8909802 protein-coding Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 ENCODES a protein that exhibits calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN long-term memory (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); COVID-19 (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); postsynaptic density (ortholog) NW_004955452 1044696 1046657 - 102019015 AGCD01043829;GBDF01015827;GBDI01179249;XM_005394680 XP_005394737 MODEL 8702257 protein-coding Dda1 DET1 and DDB1 associated 1 INVOLVED IN protein polyubiquitination (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955524 912752 920714 - 102007049 AGCD01068725;AGCD01068726;GBDK01139764;XM_005409525;XM_005409526;XM_005409527;XM_013507242;XM_013507243;XM_013507244;XM_013507245;XM_013507246 XP_005409582;XP_005409583;XP_005409584;XP_013362696;XP_013362697;XP_013362698;XP_013362699;XP_013362700 MODEL 39131722 rrna 5S_rRNA 5S ribosomal RNA 39132402 rrna 5S_rRNA 5S ribosomal RNA 8817050 protein-coding Sin3b SIN3 transcription regulator family member B ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); negative regulation of DNA-templated transcription (ortholog); skeletal muscle tissue development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); coloboma (ortholog); FOUND IN autosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955524 1049828 1067637 - 102029111 AGCD01068733;AGCD01068734;GBBH01118323;XM_013507309 XP_013362763 MODEL 9016936 protein-coding Dvl2 dishevelled segment polarity protein 2 ENCODES a protein that exhibits frizzled binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); convergent extension involved in neural plate elongation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); dextro-looped transposition of the great arteries (ortholog); FOUND IN apical part of cell (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955467 9675912 9683996 + 102027735 AGCD01051521;GBDF01125281;XM_005399545;XM_005399546 XP_005399602;XP_005399603 MODEL 8897347 protein-coding Ip6k1 inositol hexakisphosphate kinase 1 ENCODES a protein that exhibits inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955532 1625298 1644973 - 102018435 AGCD01070196;GBCE01052322;XM_013507604;XM_013507605;XM_013507606 XP_013363058;XP_013363059;XP_013363060 MODEL 8869787 ncrna LOC102018766 uncharacterized LOC102018766 NW_004955437 5832129 5834651 + 102018766 AGCD01034403;GBDF01189685;XR_261858 MODEL 8927866 protein-coding Ext1 exostosin glycosyltransferase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); axon guidance (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955417 23798044 24067759 - 102003237 AGCD01018447;AGCD01018448;AGCD01018449;AGCD01018450;GBCQ01093252;GBDJ01080892;XM_005381900 XP_005381957 MODEL 8846566 protein-coding Bcl2a1 BCL2 related protein A1 ENCODES a protein that exhibits BH domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cerebral cortex development (ortholog); response to cisplatin (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH allergic disease (ortholog); Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955533 773912 785040 - 102016308 AGCD01070329;GBDJ01389835;XM_005410388;XR_001232042 XP_005410445 MODEL 8899405 protein-coding Foxn4 forkhead box N4 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cell differentiation (ortholog); neuron fate commitment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955455 9182405 9210365 + 102021846 AGCD01045915;AGCD01045916;GBDF01157224;XM_013520288;XM_013520289;XM_013520290 XP_013375742;XP_013375743;XP_013375744 MODEL 8927624 protein-coding Samd1 sterile alpha motif domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN foam cell differentiation (ortholog); lipoprotein lipid oxidation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN chromosome (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955415 32789937 32791421 - 102016804 AGCD01016733;GBCB01057825;GBCQ01129414;XM_013512353 XP_013367807 MODEL 8742739 ncrna LOC102003823 uncharacterized LOC102003823 NW_004955403 768478 771303 + 102003823 AGCD01001708;GBDI01035702;XR_259130 MODEL 8825728 protein-coding Taldo1 transaldolase 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN fructose 6-phosphate metabolic process (ortholog); glyceraldehyde-3-phosphate metabolic process (ortholog); pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); carbohydrate metabolic disorder (ortholog); cataract (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955476 11356601 11364573 - 102011536 AGCD01055453;AGCD01055454;GBDI01015937;XM_005401818;XM_013502979 XP_005401875;XP_013358433 MODEL 8713631 protein-coding Tspan15 tetraspanin 15 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) NW_004955437 21643018 21687355 - 102022633 AGCD01034919;GBDI01066539;XM_005390084;XM_013517075;XM_013517076 XP_005390141;XP_013372529;XP_013372530 MODEL 9029371 protein-coding Armc5 armadillo repeat containing 5 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN adrenal cortex development (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); defense response to virus (ortholog); ASSOCIATED WITH ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); ACTH-independent macronodular adrenal hyperplasia 2 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); Cul3-RING ubiquitin ligase complex (ortholog) NW_004955493 8295868 8302638 + 102006676 AGCD01061289;GBDF01221849;XM_005405319 XP_005405376 MODEL 8887647 protein-coding Cul7 cullin 7 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); Golgi organization (ortholog); microtubule cytoskeleton organization (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH 3-M syndrome (ortholog); acute myeloid leukemia (ortholog); atrioventricular septal defect (ortholog); FOUND IN 3M complex (ortholog); centrosome (ortholog); Cul7-RING ubiquitin ligase complex (ortholog) NW_004955437 9003482 9018260 - 102030667 AGCD01034512;AGCD01034513;GBBH01088710;XM_005389748;XM_013516962;XM_013516963 XP_005389805;XP_013372416;XP_013372417 MODEL 8932948 protein-coding LOC102025978 sodium/glucose cotransporter 1-like NW_004955455 7427164 7489654 + 102025978 AGCD01045855;AGCD01045856;AGCD01045857;AGCD01045858;AGCD01045859;GBDF01052696;XM_005396369;XM_005396370 XP_005396426;XP_005396427 MODEL 8883997 protein-coding Cox7a2l cytochrome c oxidase subunit 7A2 like ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitochondrial respirasome assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955441 9732168 9743052 - 102015775 AGCD01037028;AGCD01037029;GBBH01030574;GBDF01084854;XM_013517633 XP_013373087 MODEL 9008564 pseudo LOC102003467 laccase domain-containing protein 1 pseudogene NW_004955425 25984730 25986065 - 102003467 AGCD01025940 MODEL 730469014 snorna SNORA61 Small nucleolar RNA SNORA61 8713459 protein-coding Rab20 RAB20, member RAS oncogene family INVOLVED IN cellular response to type II interferon (ortholog); phagosome acidification (ortholog); phagosome-lysosome fusion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); phagocytic vesicle (ortholog) NW_004955404 2087580 2088545 + 102014972 AGCD01003250;GBCQ01098101;GBDK01193260;XM_013515757 XP_013371211 MODEL 8796694 protein-coding LOC102009384 galectin-5-like NW_004955481 5414837 5422402 - 102009384 AGCD01056977;GBBH01036969;XM_013503347 XP_013358801 MODEL 9022818 ncrna LOC102011333 uncharacterized LOC102011333 NW_004955424 5069373 5154243 + 102011333 AGCD01024384;GBDF01080540;XR_001234147;XR_261043 MODEL 8744471 protein-coding Slc23a1 solute carrier family 23 member 1 ENCODES a protein that exhibits dehydroascorbic acid transmembrane transporter activity (ortholog); L-ascorbate:sodium symporter activity (ortholog); L-ascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); dehydroascorbic acid transport (ortholog); L-ascorbic acid transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); brush border (ortholog) NW_004955418 1176390 1192270 + 102019599 AGCD01018712;GBDJ01116644;XM_005382074;XM_005382075;XM_005382076;XM_005382077;XM_013512911 XP_005382131;XP_005382132;XP_005382133;XP_005382134;XP_013368365 MODEL 10284868 ncrna LOC106147488 uncharacterized LOC106147488 NW_004955567 1119931 1121246 + 106147488 AGCD01074460;XR_001232418 MODEL 10089221 ncrna LOC106148576 uncharacterized LOC106148576 NW_004955424 3498988 3499864 + 106148576 AGCD01024311;GBDF01089093;XR_001234143 MODEL 8961065 protein-coding LOC102005261 olfactory receptor 1L6 NW_004955419 5210223 5211170 - 102005261 AGCD01019789;XM_005382522 XP_005382579 MODEL 39133496 snrna U4 U4 spliceosomal RNA 8808506 protein-coding Ppp1r14b protein phosphatase 1 regulatory inhibitor subunit 14B ENCODES a protein that exhibits phosphatase inhibitor activity (ortholog); protein phosphatase regulator activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955422 20832224 20834317 + 102022305 AGCD01023092;GBDI01006659;GBDJ01006929;XM_005384972 XP_005385029 MODEL 8983906 protein-coding LOC102010539 T-complex protein 1 subunit alpha-like NW_004957703 193 1109 - 102010539 AGCD01081099;GBCC01015007;GBDI01244130;XM_005415234 XP_005415291 MODEL 8769524 pseudo LOC102005595 26S proteasome non-ATPase regulatory subunit 8 pseudogene NW_004955419 11675117 11798906 - 102005595 AGCD01019960;AGCD01019961 MODEL 39134378 misc_rna 7SK 7SK RNA 8789920 pseudo LOC102012995 myb-related protein B pseudogene NW_004955433 16071001 16073415 - 102012995 AGCD01031785 MODEL 8788360 pseudo LOC102006710 protein C3orf33 pseudogene NW_004955437 718511 719164 - 102006710 AGCD01034156 MODEL 8889216 protein-coding LOC102022087 zinc finger protein OZF-like NW_004955421 22041918 22093237 + 102022087 AGCD01022127;GBBH01210033;XM_013513778;XM_013513779;XM_013513780;XM_013513781 XP_013369232;XP_013369233;XP_013369234;XP_013369235 MODEL 9066864 protein-coding LOC102003827 beta-defensin 130-like NW_004955403 53263393 53266892 - 102003827 AGCD01003047;GBDF01142643;XM_005373831 XP_005373888 MODEL 8759889 protein-coding Tamalin trafficking regulator and scaffold protein tamalin ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of postsynaptic neurotransmitter receptor internalization (ortholog); signal transduction (ortholog); ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) NW_004955547 2377612 2385918 + 102017509 AGCD01072277;AGCD01072278;AGCD01072279;GBBH01150769;GBDK01141280;XM_013508501;XM_013508503 XP_013363955;XP_013363957 MODEL 8898630 protein-coding Rapgef1 Rap guanine nucleotide exchange factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN blood vessel development (ortholog); cell-cell adhesion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; E-cadherin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anti-basement membrane glomerulonephritis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955513 1224418 1328176 - 102024834 AGCD01066849;AGCD01066850;AGCD01066851;GBDK01129240;XM_013506678;XM_013506679;XM_013506680;XM_013506681;XM_013506682;XM_013506683;XM_013506684;XM_013506685 XP_013362132;XP_013362133;XP_013362134;XP_013362135;XP_013362136;XP_013362137;XP_013362138;XP_013362139 MODEL 39132406 rrna 5S_rRNA 5S ribosomal RNA 39133817 misc_rna 7SK 7SK RNA 8949894 protein-coding LOC102006328 zinc finger protein 792-like NW_004955468 4283745 4310889 + 102006328 AGCD01051904;AGCD01051905;GBDK01043079;XM_005400008;XM_005400009;XM_005400010;XM_005400011;XM_013522364;XM_013522365 XP_005400065;XP_005400066;XP_005400067;XP_005400068;XP_013377818;XP_013377819 MODEL 9014866 protein-coding Polr2b RNA polymerase II subunit B ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955447 14110182 14150556 - 102023209 AGCD01040979;AGCD01040980;AGCD01040981;AGCD01040982;AGCD01040983;AGCD01040984;AGCD01040985;GBBH01062307;XM_005392864;XM_013518517 XP_005392921;XP_013373971 MODEL 8978886 protein-coding LOC102025261 olfactory receptor 7C1-like NW_004955495 785679 795701 - 102025261 AGCD01061653;XM_013505047 XP_013360501 MODEL 8985442 pseudo LOC102012628 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955414 14752641 14753521 - 102012628 AGCD01015156 MODEL 8744595 protein-coding Emb embigin INVOLVED IN cell adhesion (ortholog); plasma membrane lactate transport (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog); synapse (ortholog) NW_004955446 16716677 16757031 + 102028592 AGCD01040349;GBBH01001163;XM_005392729 XP_005392786 MODEL 8971193 protein-coding Chrnb3 cholinergic receptor nicotinic beta 3 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); bipolar disorder (ortholog); cocaine dependence (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); dopaminergic synapse (ortholog); protein-containing complex (ortholog) NW_004955536 189881 229835 - 102022743 AGCD01070720;AGCD01070721;AGCD01070722;GBDI01244676;XM_013507722 XP_013363176 MODEL 39132799 snorna SNORD62 Small nucleolar RNA SNORD62 9056618 protein-coding Bcl2l1 BCL2 like 1 ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); clathrin binding (ortholog); INVOLVED IN apoptotic process in bone marrow cell (ortholog); cell population proliferation (ortholog); cellular response to alkaloid (ortholog); PARTICIPATES IN erythropoietin signaling pathway; interleukin-3 signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); centrosome (ortholog); clathrin-coated pit (ortholog) NW_004955422 29254440 29307104 + 102016487 AGCD01023387;AGCD01023388;GBBH01214380;XM_005384894;XM_005384895;XM_005384896;XM_005384897;XM_005384898;XM_005384899;XM_005384900;XM_005384901;XM_005384902 XP_005384951;XP_005384952;XP_005384953;XP_005384954;XP_005384955;XP_005384956;XP_005384957;XP_005384958;XP_005384959 MODEL 9017616 protein-coding Rhbdd1 rhomboid domain containing 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); cellular response to UV (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955453 7527090 7656689 - 102010767 AGCD01044747;AGCD01044748;AGCD01044749;GBDJ01117091;XM_005395453;XM_005395455;XM_005395456;XM_005395457;XM_005395458;XM_005395459;XM_005395460 XP_005395510;XP_005395512;XP_005395513;XP_005395514;XP_005395515;XP_005395516;XP_005395517 MODEL 9023679 protein-coding Rab21 RAB21, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); positive regulation of dendrite morphogenesis (ortholog); positive regulation of early endosome to late endosome transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955405 11766674 11778637 + 102019564 AGCD01004842;GBCB01003208;GBCE01134842;XM_013517632 XP_013373086 MODEL 8859207 protein-coding Ptpn2 protein tyrosine phosphatase non-receptor type 2 ENCODES a protein that exhibits integrin binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); erythrocyte differentiation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); Crohn's disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955402 771410 846671 + 102008478 AGCD01000033;AGCD01000034;GBCE01096711;XM_005372550;XM_013513054;XM_013513107;XM_013513139;XM_013513163;XM_013513183;XM_013513207;XM_013513238;XM_013513272;XM_013513296;XM_013513319;XM_013513343 XP_005372607;XP_013368508;XP_013368561;XP_013368593;XP_013368617;XP_013368637;XP_013368661;XP_013368692;XP_013368726;XP_013368750;XP_013368773;XP_013368797 MODEL 8998923 protein-coding Efnb2 ephrin B2 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adherens junction organization (ortholog); angiogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cervical cancer (ortholog); colon carcinoma (ortholog); colorectal carcinoma (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955404 5000906 5030068 + 102016557 AGCD01003303;GBDJ01130272;XM_013516817 XP_013372271 MODEL 8976980 protein-coding Lrriq4 leucine rich repeats and IQ motif containing 4 ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955420 66770 100154 + 102013613 AGCD01020530;AGCD01020531;AGCD01020532;GBDF01225997;XM_005382953;XM_005382955;XM_013513525;XM_013513526 XP_005383010;XP_005383012;XP_013368979;XP_013368980 MODEL 10271974 ncrna LOC106148577 uncharacterized LOC106148577 NW_004955424 12716271 12720866 + 106148577 AGCD01024618;GBBH01204887;XR_001234145 MODEL 8998341 protein-coding Camk2n2 calcium/calmodulin dependent protein kinase II inhibitor 2 ENCODES a protein that exhibits calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; FOUND IN nucleus (ortholog); synapse (ortholog) NW_004955420 23226270 23227403 + 102026118 AGCD01021236;GBDF01205796;XM_005383345 XP_005383402 MODEL 9062891 protein-coding Ccl20 C-C motif chemokine ligand 20 ENCODES a protein that exhibits CCR6 chemokine receptor binding (ortholog); chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); calcium-mediated signaling (ortholog); cell chemotaxis (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN extracellular region (ortholog) NW_004955453 6846625 6850007 - 102007187 AGCD01044732;GBDK01358667;XM_005395441;XM_013519756 XP_005395498;XP_013375210 MODEL 39131723 rrna 5S_rRNA 5S ribosomal RNA 8915173 protein-coding Ddah1 dimethylarginine dimethylaminohydrolase 1 ENCODES a protein that exhibits dimethylargininase activity (ortholog); nitric-oxide synthase inhibitor activity (ortholog); INVOLVED IN L-arginine catabolic process (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of cellular response to hypoxia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cardiovascular system disease (ortholog); coronary artery disease (ortholog) NW_004955423 8637116 8673881 + 102024696 AGCD01023635;GBDF01159806;XM_005385138 XP_005385195 MODEL 8928663 protein-coding Sinhcaf SIN3-HDAC complex associated factor INVOLVED IN negative regulation of cell differentiation (ortholog); negative regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Sin3-type complex (ortholog) NW_004955505 4344465 4377463 + 102012560 AGCD01065104;AGCD01065105;AGCD01065106;AGCD01065107;GBBH01186638;XM_005407132 XP_005407189 MODEL 9066614 pseudo LOC102018769 zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene NW_004955439 2361444 2362083 + 102018769 AGCD01035643 MODEL 8997832 protein-coding Dvl3 dishevelled segment polarity protein 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); frizzled binding (ortholog); protease binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); autosomal dominant Robinow syndrome 3 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 23291650 23301695 - 102030085 AGCD01021240;AGCD01021241;GBDI01077356;GBDK01277196;XM_013513361 XP_013368815 MODEL 8987230 protein-coding Dgkh diacylglycerol kinase eta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); phosphatidic acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); endosome (ortholog) NW_004955518 4104700 4263657 - 102022731 AGCD01067820;AGCD01067821;AGCD01067822;AGCD01067823;GBBH01109666;GBDK01075088;XM_005409113 XP_005409170 MODEL 8865511 pseudo LOC102003469 integrator complex subunit 10-like NW_004955426 26056064 26062306 + 102003469 AGCD01026736;AGCD01026737 MODEL 8878308 protein-coding Ext2 exostosin glycosyltransferase 2 ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); endochondral bone morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955422 3303948 3438381 - 102024123 AGCD01022507;AGCD01022508;AGCD01022509;GBBH01088284;GBDK01079257;XM_013514241 XP_013369695 MODEL 8897538 ncrna LOC102024162 uncharacterized LOC102024162 NW_004955437 1572617 1575264 - 102024162 AGCD01034218;GBDF01220897;XR_261824 MODEL 8765662 protein-coding Xpo6 exportin 6 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955493 6172860 6265269 - 102009620 AGCD01061085;GBBH01033663;XM_005405146;XM_005405147;XM_005405149;XM_013504862;XM_013504863 XP_005405203;XP_005405204;XP_005405206;XP_013360316;XP_013360317 MODEL 8934546 protein-coding LOC102005263 E3 ubiquitin-protein ligase TRIM38-like NW_004955483 1063852 1071092 + 102005263 AGCD01057639;XM_013503764 XP_013359218 MODEL 8805716 protein-coding Tk1 thymidine kinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); thymidine kinase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN digestive tract development (ortholog); DNA synthesis involved in mitotic DNA replication (ortholog); fetal process involved in parturition (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); breast cancer (ortholog) NW_004955506 4379830 4390729 + 102008876 AGCD01065337;GBDK01117779;XM_005407382;XM_005407383 XP_005407439;XP_005407440 MODEL 8725372 protein-coding Samd10 sterile alpha motif domain containing 10 ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog) NW_004955528 279481 284386 + 102010090 AGCD01069523;AGCD01069524;GBCE01142429;GBDK01284591;XM_013507483 XP_013362937 MODEL 8993993 protein-coding Slc23a2 solute carrier family 23 member 2 ENCODES a protein that exhibits L-ascorbate:sodium symporter activity (ortholog); L-ascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN blood circulation (ortholog); cellular response to ethanol (ortholog); L-ascorbic acid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Binge Drinking (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955415 15565344 15677935 - 102009494 AGCD01016349;AGCD01016350;AGCD01016351;AGCD01016352;AGCD01016353;GBCE01023386;XM_005380822;XM_005380823 XP_005380879;XP_005380880 MODEL 8950005 pseudo LOC102010540 Golgi apparatus membrane protein TVP23 homolog B pseudogene NW_004955403 54262808 54264290 + 102010540 AGCD01003090 MODEL 8740323 pseudo LOC102005596 TCDD-inducible poly [ADP-ribose] polymerase pseudogene NW_004955483 1094919 1097507 - 102005596 AGCD01057640 MODEL 9003403 ncrna LOC102022098 uncharacterized LOC102022098 NW_004955495 5175818 5177703 - 102022098 AGCD01061979;GBDF01120725;XR_001231368 MODEL 8723546 protein-coding Tspan16 tetraspanin 16 ASSOCIATED WITH sarcoma (ortholog) NW_004955495 2234098 2249884 + 102018409 AGCD01061756;AGCD01061757;AGCD01061758;AGCD01061759;GBDF01001019;GBDF01058236;XM_005405647;XM_005405648 XP_005405704;XP_005405705 MODEL 8753395 protein-coding LOC102007853 uncharacterized LOC102007853 NW_004955406 41658569 41676699 + 102007853 AGCD01006688;GBDK01152399;XM_005375483 XP_005375540 MODEL 8703567 protein-coding Armc6 armadillo repeat containing 6 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955524 2695720 2709163 - 102006492 AGCD01068829;GBBH01226770;XM_005409610;XM_005409611 XP_005409667;XP_005409668 MODEL 8911819 protein-coding Cul9 cullin 9 INVOLVED IN microtubule cytoskeleton organization (ortholog); protein ubiquitination (ortholog); regulation of mitotic nuclear division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arthritis (ortholog); atrial heart septal defect (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog) NW_004955437 9109997 9145181 + 102004519 AGCD01034516;AGCD01034517;AGCD01034518;GBDJ01353552;XM_013516908 XP_013372362 MODEL 39131724 rrna 5S_rRNA 5S ribosomal RNA 730469375 snorna SNORA61 Small nucleolar RNA SNORA61 39133818 misc_rna 7SK 7SK RNA 8961409 protein-coding Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog ENCODES a protein that exhibits phosphatidate cytidylyltransferase activity (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955429 14452473 14500441 - 102016831 AGCD01028783;GBDI01325805;XM_005387013;XM_005387014;XM_013515554 XP_005387070;XP_005387071;XP_013371008 MODEL 8850129 protein-coding Rapgef2 Rap guanine nucleotide exchange factor 2 ENCODES a protein that exhibits beta-1 adrenergic receptor binding (ortholog); cAMP binding (ortholog); cGMP binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); blood vessel development (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); familial adult myoclonic epilepsy 7 (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955471 12670837 12838910 + 102020438 AGCD01053303;AGCD01053304;AGCD01053305;AGCD01053306;AGCD01053307;AGCD01053308;GBCE01137795;GBDF01084835;XM_013522900 XP_013378354 MODEL 8713993 protein-coding LOC102009385 olfactory receptor 2T27-like NW_004955418 29991095 30001887 - 102009385 AGCD01019496;XM_005382363 XP_005382420 MODEL 8998502 protein-coding LOC102029885 olfactory receptor 8K3-like NW_004955511 1289135 1290094 + 102029885 AGCD01066362;GBDF01038994;XM_013506371 XP_013361825 MODEL 9014614 protein-coding LOC102006333 olfactory receptor 52D1 NW_004955414 21395818 21396783 + 102006333 AGCD01015418;XM_005380089 XP_005380146 MODEL 8934664 protein-coding Foxo1 forkhead box O1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); blood vessel development (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alveolar rhabdomyosarcoma (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955431 5797359 5890758 + 102013199 AGCD01030044;AGCD01030045;AGCD01030046;GBBH01077908;GBDK01025362;XM_005387637 XP_005387694 MODEL 39133497 snrna U4 U4 spliceosomal RNA 10191528 ncrna LOC106147489 uncharacterized LOC106147489 NW_004955567 797119 801109 + 106147489 AGCD01074433;GBCQ01145493;XR_001232419 MODEL 8780799 protein-coding Chrnb4 cholinergic receptor nicotinic beta 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); behavioral response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); chronic obstructive pulmonary disease (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell junction (ortholog); cholinergic synapse (ortholog) NW_004955450 1013897 1030232 - 102013030 AGCD01042349;GBDJ01147141;XM_005393458;XM_005393459 XP_005393515;XP_005393516 MODEL 39134379 misc_rna 7SK 7SK RNA 8940806 protein-coding Emc1 ER membrane protein complex subunit 1 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955527 19069 45951 + 102014484 AGCD01069371;AGCD01069372;GBDF01001898;XM_005409788;XM_005409789 XP_005409845;XP_005409846 MODEL 8998012 ncrna LOC102012998 uncharacterized LOC102012998 NW_004955435 13458284 13466728 + 102012998 AGCD01033202;AGCD01033203;XR_261687 MODEL 8959600 pseudo LOC102025980 eukaryotic translation initiation factor 4E pseudogene NW_004955408 35832410 35833045 - 102025980 AGCD01008963 MODEL 8759575 protein-coding Bcl2l11 BCL2 like 11 ENCODES a protein that exhibits dynein complex binding (ortholog); microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic process involved in embryonic digit morphogenesis (ortholog); B cell homeostasis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); BIM-BCL-2 complex (ortholog); BIM-BCL-xl complex (ortholog) NW_004955470 2740682 2780225 - 102004270 AGCD01052681;GBCQ01129618;GBDF01162654;XM_013522758;XM_013522760;XM_013522761;XM_013522762 XP_013378212;XP_013378214;XP_013378215;XP_013378216 MODEL 8813809 protein-coding Rab22a RAB22A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN endocytosis (ortholog); endosomal transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955445 1167941 1224932 - 102021493 AGCD01039330;AGCD01039331;AGCD01039332;AGCD01039333;AGCD01039334;GBBH01076597;GBDK01284734;XM_013518261 XP_013373715 MODEL 9003756 protein-coding Coxfa4 cytochrome c oxidase associated subunit FA4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955432 17502272 17509517 - 102004105 AGCD01031126;GBDF01003997;XM_005388104 XP_005388161 MODEL 8806509 protein-coding Ptpn20 protein tyrosine phosphatase non-receptor type 20 FOUND IN centriolar satellite (ortholog) NW_004955556 1850933 1943318 + 102010842 AGCD01073204;AGCD01073205;AGCD01073206;GBBH01151275;XM_005412599;XM_005412600;XM_005412601;XM_005412602;XM_005412603;XM_005412604;XM_005412605;XM_005412606;XM_005412607;XM_005412608;XM_005412609;XM_013508810 XP_005412656;XP_005412657;XP_005412658;XP_005412659;XP_005412660;XP_005412661;XP_005412662;XP_005412663;XP_005412664;XP_005412665;XP_005412666;XP_013364264 MODEL 8851566 protein-coding LOC102010542 toll-like receptor 12 NW_004955452 11635179 11638291 + 102010542 AGCD01044342;GBDK01385301;XM_013519712 XP_013375166 MODEL 8889919 protein-coding Camk4 calcium/calmodulin dependent protein kinase IV ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN gene expression (ortholog); long-term memory (ortholog); myeloid dendritic cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); GABA-ergic synapse (ortholog) NW_004955418 3664352 3887175 - 102016710 AGCD01018797;AGCD01018798;AGCD01018799;AGCD01018800;AGCD01018801;GBDF01152935;GBDF01152936;XM_005382166 XP_005382223 MODEL 8956572 ncrna LOC102011336 uncharacterized LOC102011336 NW_004955500 5251418 5257274 + 102011336 AGCD01063826;GBDJ01403986;XR_001231513;XR_264228 MODEL 8866376 protein-coding LOC102012632 olfactory receptor 52L1 NW_004955414 21869937 21870911 - 102012632 AGCD01015436;XM_005380106 XP_005380163 MODEL 730469212 snorna SNORD65 Small nucleolar RNA SNORD65 9017971 protein-coding Ppp1r14c protein phosphatase 1 regulatory inhibitor subunit 14C ENCODES a protein that exhibits protein serine/threonine phosphatase inhibitor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Coronavirus infectious disease (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955439 11142520 11238660 - 102005843 AGCD01035892;AGCD01035893;GBDI01117555;XM_005390591;XM_013517322;XM_013517323;XR_001235188;XR_001235189;XR_001235190;XR_001235191;XR_001235192;XR_001235193;XR_261978;XR_261979 XP_005390648;XP_013372776;XP_013372777 MODEL 8882792 protein-coding LOC102006713 keratin, type II cuticular Hb1-like NW_004955547 2624360 2629144 + 102006713 AGCD01072287;GBDF01003670;XM_013508439 XP_013363893 MODEL 8744759 protein-coding Rhbdd2 rhomboid domain containing 2 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); Mesothelioma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955456 14652995 14666155 + 102006543 AGCD01046647;AGCD01046648;GBDF01052883;XM_005396802 XP_005396859 MODEL 8762622 pseudo LOC102003830 lysophospholipid acyltransferase LPCAT4 pseudogene NW_004955404 19109521 19111476 - 102003830 AGCD01003637 MODEL 8961068 protein-coding LOC102005270 uncharacterized LOC102005270 NW_004955494 876724 895412 - 102005270 AGCD01061387;AGCD01061388;GBDI01038326;XM_013505014;XR_001231324;XR_001231325;XR_001231326;XR_001231327 XP_013360468 MODEL 10359883 ncrna LOC106148578 uncharacterized LOC106148578 NW_004955424 4079325 4090300 - 106148578 AGCD01024337;AGCD01024338;GBDF01053942;XR_001234146 MODEL 8857438 protein-coding Ip6k2 inositol hexakisphosphate kinase 2 ENCODES a protein that exhibits flavonoid binding (ortholog); inositol hexakisphosphate 5-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN cellular response to flavonoid (ortholog); inositol phosphate biosynthetic process (ortholog); inositol phosphate metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955532 766577 794461 - 102003690 AGCD01070152;AGCD01070153;GBDF01252337;XM_005410169;XM_013507647;XM_013507648 XP_005410226;XP_013363101;XP_013363102 MODEL 8928271 protein-coding Ddah2 DDAH family member 2, ADMA-independent ENCODES a protein that exhibits dimethylargininase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955437 265727 269016 - 102027108 AGCD01034115;GBCQ01040939;XM_005389381;XM_005389382;XM_013516810 XP_005389438;XP_005389439;XP_013372264 MODEL 8847566 protein-coding Tk2 thymidine kinase 2 ENCODES a protein that exhibits deoxycytidine kinase activity (ortholog); thymidine kinase activity (ortholog); INVOLVED IN deoxycytidine metabolic process (ortholog); deoxyribonucleotide metabolic process (ortholog); mitochondrial DNA metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 3 (ortholog); colorectal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955433 23075930 23106281 - 102019943 AGCD01031952;GBCB01120791;XM_005388462;XM_005388463;XM_005388466;XM_013516240;XM_013516241;XM_013516242 XP_005388519;XP_005388520;XP_005388523;XP_013371694;XP_013371695;XP_013371696 MODEL 8723570 protein-coding Ccl21 C-C motif chemokine ligand 21 ENCODES a protein that exhibits CCR7 chemokine receptor binding (ortholog); chemokine activity (ortholog); chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); CCL21-activated CCR7 signaling pathway (ortholog); cell chemotaxis (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog); pulmonary fibrosis (ortholog); rheumatoid arthritis (ortholog) NW_004955472 1427660 1428771 + 102019495 AGCD01053390;GBCE01007174;XM_005401042 XP_005401099 MODEL 9016356 protein-coding LOC102025265 melanoma-associated antigen 10-like NW_004955498 4274086 4299079 - 102025265 AGCD01062986;AGCD01062987;AGCD01062988;AGCD01062989;AGCD01062990;AGCD01062991;AGCD01062992;GBDF01077002;XM_013505527 XP_013360981 MODEL 8923858 pseudo LOC102005598 pre-mRNA-splicing factor SLU7 pseudogene NW_004955419 21338887 21343992 - 102005598 AGCD01020272 MODEL 8735904 protein-coding LOC102022099 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 NW_004955423 16160378 16174472 - 102022099 AGCD01023824;GBDF01176664;XM_013514557;XM_013514558 XP_013370011;XP_013370012 MODEL 8825299 protein-coding Sipa1 signal-induced proliferation-associated 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cellular response to water deprivation (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog) NW_004955422 19615440 19627195 - 102003459 AGCD01023024;GBDJ01018460;XM_005384470;XM_013513855;XM_013513856;XM_013513857;XM_013513858 XP_005384527;XP_013369309;XP_013369310;XP_013369311;XP_013369312 MODEL 8714532 protein-coding Dxo decapping exoribonuclease ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); magnesium ion binding (ortholog); mRNA 5'-diphosphatase activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); NAD-cap decapping (ortholog); nuclear mRNA surveillance (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 482866 484989 - 102007366 AGCD01034137;GBBH01005656;XM_005389406 XP_005389463 MODEL 730469204 snorna SNORA61 Small nucleolar RNA SNORA61 9036076 protein-coding Extl1 exostosin like glycosyltransferase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955452 5490801 5506178 + 102011497 AGCD01044036;GBCB01089527;XM_005394837;XM_013519676;XM_013519677 XP_005394894;XP_013375130;XP_013375131 MODEL 8823844 protein-coding Dgki diacylglycerol kinase iota ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); excitatory postsynaptic potential (ortholog); habituation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955494 5119419 5541058 + 102006587 AGCD01061518;AGCD01061519;AGCD01061520;AGCD01061521;AGCD01061522;GBDF01250767;XM_013505028 XP_013360482 MODEL 8849394 pseudo LOC102024163 60S ribosomal protein L30-like NW_004955534 1136896 1137291 + 102024163 AGCD01070487 MODEL 9006740 protein-coding Xpo7 exportin 7 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nuclear pore (ortholog); nucleus (ortholog) NW_004955403 45470932 45508691 + 102029143 AGCD01002816;GBBH01206500;XM_005373641;XM_005373642 XP_005373698;XP_005373699 MODEL 8835204 protein-coding Efnb3 ephrin B3 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon choice point recognition (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); movement disease (ortholog); sarcoma (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); plasma membrane (ortholog) NW_004955467 9217796 9225223 - 102006325 AGCD01051484;GBBH01129008;XM_005399466;XM_005399467 XP_005399523;XP_005399524 MODEL 9034902 protein-coding Slc23a3 solute carrier family 23 member 3 INVOLVED IN hypoxanthine transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); cervical cancer (ortholog) NW_004955453 14271343 14278233 + 102022157 AGCD01044861;GBCQ01068748;XM_005395589;XM_005395590 XP_005395646;XP_005395647 MODEL 39133498 snrna U4 U4 spliceosomal RNA 8868743 protein-coding Lrrk1 leucine rich repeat kinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone resorption (ortholog); osteoclast development (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955416 27860934 27988279 + 102009943 AGCD01017622;AGCD01017623;GBDI01187263;XM_013512546;XM_013512547 XP_013368000;XP_013368001 MODEL 8753468 protein-coding Foxo3 forkhead box O3 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN antral ovarian follicle growth (ortholog); brain morphogenesis (ortholog); cellular response to amyloid-beta (ortholog); PARTICIPATES IN insulin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955411 33655958 33770829 + 102011965 AGCD01012375;GBBH01076277;XM_005377848;XM_013510798 XP_005377905;XP_013366252 MODEL 39132408 rrna 5S_rRNA 5S ribosomal RNA 39134380 misc_rna 7SK 7SK RNA 8860249 protein-coding Chrnd cholinergic receptor nicotinic delta subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); musculoskeletal movement (ortholog); regulation of membrane potential (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Breast Cancer, Familial (ortholog); centronuclear myopathy (ortholog); congenital myasthenic syndrome (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) NW_004955453 3433915 3440534 - 102016444 AGCD01044658;GBBH01073781;XM_005395377;XM_013520002;XM_013520003 XP_005395434;XP_013375456;XP_013375457 MODEL 8839737 protein-coding LOC102007856 uncharacterized protein C3orf26 homolog NW_004955407 20972503 20976017 - 102007856 AGCD01007347;XM_013505935 XP_013361389 MODEL 9042263 protein-coding Polr2c RNA polymerase II subunit C INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Deafness (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 15096324 15104435 + 102028888 AGCD01031745;GBCE01074461;XM_005388397 XP_005388454 MODEL 8817316 protein-coding Bcl2l12 BCL2 like 12 ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cellular senescence (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955559 1217797 1224875 - 102011055 AGCD01073636;AGCD01073637;GBDF01137503;XM_013508948 XP_013364402 MODEL 9040167 protein-coding CUNH10orf105 chromosome unknown C10orf105 homolog ASSOCIATED WITH autosomal recessive nonsyndromic deafness 12 (ortholog); Usher syndrome (ortholog) NW_004955437 19767395 19772447 + 102004321 AGCD01034865;GBDF01170530;XM_005390023;XM_005390024;XM_005390025;XM_005390026 XP_005390080;XP_005390081;XP_005390082;XP_005390083 MODEL 8784937 pseudo LOC102003470 L-lactate dehydrogenase A chain pseudogene NW_004955505 1011597 1012538 + 102003470 AGCD01064964 MODEL 9041456 protein-coding Rab23 RAB23, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular defense response (ortholog); cilium assembly (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955502 2947170 2980634 + 102026236 AGCD01064306;AGCD01064307;GBBH01102042;XM_005406882 XP_005406939 MODEL 8881396 protein-coding Tspan17 tetraspanin 17 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog); regulation of membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955408 28914392 28924352 + 102016239 AGCD01008734;GBCQ01039281;XM_005376397;XM_013509645;XM_013509648;XM_013509649 XP_005376454;XP_013365099;XP_013365102;XP_013365103 MODEL 39131725 rrna 5S_rRNA 5S ribosomal RNA 8929279 pseudo LOC102010543 ferritin light chain pseudogene NW_004955405 19953476 19961761 - 102010543 AGCD01005050 MODEL 8982564 protein-coding Armc7 armadillo repeat containing 7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); U12-type catalytic step 2 spliceosome (ortholog) NW_004955553 2002636 2010619 + 102020165 AGCD01072911;GBCE01003548;XM_005412273;XM_005412275;XM_013508648;XM_013508649;XR_001232287;XR_001232288;XR_001232289 XP_005412330;XP_005412332;XP_013364102;XP_013364103 MODEL 9053426 ncrna LOC102009386 uncharacterized LOC102009386 NW_004955483 2296014 2317875 + 102009386 AGCD01057673;GBDF01118867;XR_001231019 MODEL 8819219 protein-coding LOC102029886 olfactory receptor 1444 NW_004955511 3440643 3445008 - 102029886 AGCD01066461;XM_005408033 XP_005408090 MODEL 8769289 protein-coding Rapgef3 Rap guanine nucleotide exchange factor 3 ENCODES a protein that exhibits cAMP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN artery development (ortholog); associative learning (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); amyloidosis (ortholog); Arterial Injury (ortholog); FOUND IN apical part of cell (ortholog); axon terminus (ortholog); basal plasma membrane (ortholog) NW_004955500 6655056 6674311 - 102021367 AGCD01063889;GBCE01117886;GBDK01021143;XM_005406623 XP_005406680 MODEL 8738402 protein-coding Samd11 sterile alpha motif domain containing 11 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); PH domain binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); retinal rod cell development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nucleus (ortholog); PRC1 complex (ortholog) NW_004955486 9763704 9781132 - 102007238 AGCD01059198;AGCD01059199;GBDI01105768;XM_005404271 XP_005404328 MODEL 8775609 protein-coding Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 INVOLVED IN dendritic spine maintenance (ortholog); myoblast fusion (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955449 14353693 14586010 - 102007717 AGCD01042164;AGCD01042165;AGCD01042166;AGCD01042167;GBDK01276459;XM_005393379;XM_005393380;XM_005393381;XM_013518760;XM_013518761;XM_013518762;XM_013518763;XM_013518764;XM_013518765;XM_013518767 XP_005393436;XP_005393437;XP_005393438;XP_013374214;XP_013374215;XP_013374216;XP_013374217;XP_013374218;XP_013374219;XP_013374221 MODEL 10320700 ncrna LOC106147490 uncharacterized LOC106147490 NW_004955567 419170 428642 - 106147490 AGCD01074404;GBDK01255717;XR_001232420 MODEL 8712010 protein-coding LOC102013001 putative spermatogenesis-associated protein 31D3 NW_004955530 1751228 1756912 - 102013001 AGCD01069899;GBDF01052090;XM_013507542;XM_013507543;XM_013507544 XP_013362996;XP_013362997;XP_013362998 MODEL 8792843 protein-coding Ppp1r14d protein phosphatase 1 regulatory inhibitor subunit 14D ENCODES a protein that exhibits protein serine/threonine phosphatase inhibitor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955416 7681138 7693644 - 102028187 AGCD01017001;AGCD01017002;AGCD01017003;GBDI01254082;XM_005381265;XM_013512622 XP_005381322;XP_013368076 MODEL 8830279 protein-coding LOC102025981 uncharacterized LOC102025981 NW_004955408 26937492 26964064 - 102025981 AGCD01008676;GBDF01076789;XM_005376587 XP_005376644 MODEL 8890062 protein-coding Coxfa4l2 cytochrome c oxidase hypoxia associated subunit FA4L2 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); negative regulation of mitochondrial electron transport, NADH to ubiquinone (ortholog); negative regulation of reactive oxygen species biosynthetic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); rheumatoid arthritis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 4962868 4965838 - 102021854 AGCD01047446;GBDF01052187;XM_005397349 XP_005397406 MODEL 9038231 protein-coding Efr3a EFR3 homolog A INVOLVED IN protein localization to plasma membrane (ortholog); synaptic vesicle priming (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955461 6588178 6687499 + 102010676 AGCD01048910;AGCD01048911;GBCQ01067382;XM_005398007;XM_005398008;XM_005398009;XM_005398010;XM_005398011 XP_005398064;XP_005398065;XP_005398066;XP_005398067;XP_005398068 MODEL 39133819 misc_rna 7SK 7SK RNA 8952633 pseudo LOC102006337 peptidyl-prolyl cis-trans isomerase G pseudogene NW_004955414 2350960 2358590 - 102006337 AGCD01014790;AGCD01014791;AGCD01014792 MODEL 8918654 protein-coding Ccl22 C-C motif chemokine ligand 22 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); monocyte chemotaxis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anti-basement membrane glomerulonephritis (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog) NW_004955433 15002001 15007324 + 102025388 AGCD01031743;GBDF01023639;XM_005388385 XP_005388442 MODEL 8786929 protein-coding Ptpn21 protein tyrosine phosphatase non-receptor type 21 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955438 11087906 11162592 - 102006283 AGCD01035224;AGCD01035225;AGCD01035226;AGCD01035227;GBDJ01312275;XM_005390257;XM_013517163;XM_013517164;XM_013517165;XM_013517166 XP_005390314;XP_013372617;XP_013372618;XP_013372619;XP_013372620 MODEL 8936850 pseudo LOC102005606 eukaryotic translation initiation factor 5A-2 pseudogene NW_004955422 22271814 22272275 - 102005606 AGCD01023153 MODEL 8988830 protein-coding Efr3b EFR3 homolog B INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); social behavior (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955469 7159087 7215234 + 102029498 AGCD01052411;GBCB01076312;XM_005400569 XP_005400626 MODEL 8968340 protein-coding Emc10 ER membrane protein complex subunit 10 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell migration (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) NW_004955559 672055 676569 - 102018659 AGCD01073607;GBBH01088737;GBCQ01033482;XM_005412783 XP_005412840 MODEL 8985349 protein-coding Sipa1l1 signal induced proliferation associated 1 like 1 ENCODES a protein that exhibits actin filament binding (ortholog); ephrin receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); ephrin receptor signaling pathway (ortholog); postsynaptic actin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955523 3545807 3908329 - 102005837 AGCD01068616;AGCD01068617;AGCD01068618;AGCD01068619;AGCD01068620;AGCD01068621;AGCD01068622;GBDF01128061;XM_005409444;XM_005409446;XM_005409448;XM_005409449;XM_005409450;XM_013507169;XR_264641 XP_005409501;XP_005409503;XP_005409505;XP_005409506;XP_005409507;XP_013362623 MODEL 8760438 pseudo LOC102005275 transcription factor BTF3 pseudogene NW_004955497 481788 482491 + 102005275 AGCD01062416 MODEL 8728075 protein-coding Rhbdd3 rhomboid domain containing 3 INVOLVED IN liver development (ortholog); MAPK cascade (ortholog); negative regulation of natural killer cell activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955455 3564867 3570910 - 102003730 AGCD01045636;GBDF01047829;XM_005396194;XM_005396195;XM_005396196 XP_005396251;XP_005396252;XP_005396253 MODEL 8852981 protein-coding LOC102018771 ETS translocation variant 3 NW_004955545 3146221 3160533 - 102018771 AGCD01071933;GBDK01237418;XM_005411739;XM_005411741 XP_005411796;XP_005411798 MODEL 8809146 protein-coding Ip6k3 inositol hexakisphosphate kinase 3 ENCODES a protein that exhibits inositol hexakisphosphate 6-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN inositol phosphate biosynthetic process (ortholog); locomotion (ortholog); phosphatidylinositol metabolic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955437 2128337 2150714 - 102011041 AGCD01034260;GBCB01021741;XM_005389508;XM_013516932 XP_005389565;XP_013372386 MODEL 39132414 rrna 5S_rRNA 5S ribosomal RNA 8969110 ncrna LOC102025982 uncharacterized LOC102025982 NW_004955409 12686951 12701458 + 102025982 AGCD01009556;GBCB01000856;XR_259779 MODEL 8753437 pseudo LOC102011337 transcription elongation factor B polypeptide 1 pseudogene NW_004955502 352527 352808 - 102011337 AGCD01064237;XM_005406918 MODEL 8771470 protein-coding Tkfc triokinase and FMN cyclase ENCODES a protein that exhibits FAD-AMP lyase (cyclizing) activity (ortholog); glycerone kinase activity (ortholog); triokinase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); carbohydrate phosphorylation (ortholog); fructose catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog) NW_004955511 6200433 6235855 - 102017593 AGCD01066598;GBCE01135212;XM_005408164;XM_005408165;XM_005408166;XM_005408167;XM_005408168 XP_005408221;XP_005408222;XP_005408223;XP_005408224;XP_005408225 MODEL 8727832 ncrna LOC102022100 uncharacterized LOC102022100 NW_004955424 1611798 1616189 + 102022100 AGCD01024240;GBBH01004877;XR_001234200;XR_261023 MODEL 8800117 protein-coding Polr2d RNA polymerase II subunit D INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955459 2687005 2696388 + 102022472 AGCD01047996;GBCE01096350;XM_005397575 XP_005397632 MODEL 9042053 protein-coding Chrne cholinergic receptor nicotinic epsilon subunit ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN monoatomic cation transport (ortholog); regulation of membrane potential (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Breast Cancer, Familial (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 4 (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); postsynaptic membrane (ortholog) NW_004955467 10312620 10318700 - 102021111 AGCD01051558;GBCB01098117;XM_005399619;XM_005399621;XM_013522172 XP_005399676;XP_005399678;XP_013377626 MODEL 8874336 ncrna LOC102003471 uncharacterized LOC102003471 NW_004955428 13113557 13178517 - 102003471 AGCD01027942;AGCD01027943;AGCD01027944;GBDI01311971;XR_001234449;XR_001234450;XR_261299 MODEL 8904568 pseudo LOC102010545 COP9 signalosome complex subunit 8-like NW_004955406 37300353 37301399 - 102010545 AGCD01006573 MODEL 151707882 snorna SNORD65 Small nucleolar RNA SNORD65 39131726 rrna 5S_rRNA 5S ribosomal RNA 10289125 protein-coding Tspan18 tetraspanin 18 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); calcium-mediated signaling (ortholog); hemostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cell periphery (ortholog) NW_004955422 2833124 2871460 - 106146238 AGCD01022495;XM_013514197;XM_013514198 XP_013369651;XP_013369652 MODEL 8719523 protein-coding Rab24 RAB24, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); autophagy (ortholog); meiotic nuclear division (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); clear cell renal cell carcinoma (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955408 29548839 29551184 - 102023117 AGCD01008762;GBCB01023942;XM_005376424 XP_005376481 MODEL 9065856 protein-coding Extl2 exostosin like glycosyltransferase 2 ENCODES a protein that exhibits alpha-1,4-N-acetylgalactosaminyltransferase activity (ortholog); glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); UDP-N-acetylgalactosamine metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955435 5509648 5527751 - 102006385 AGCD01032890;GBCB01020697;GBDF01193174;XM_005388800 XP_005388857 MODEL 9058373 protein-coding LOC102003832 UDP-glucuronosyltransferase 1-8-like NW_004955453 2647244 2648138 - 102003832 AGCD01044635;GBDJ01098935;XM_005395700 XP_005395757 MODEL 8924749 protein-coding LOC102024164 elongation factor 1-alpha 1-like NW_004955437 17981299 17983136 + 102024164 AGCD01034770;AGCD01034771;XM_013516741 XP_013372195 MODEL 8834753 protein-coding Dgkk diacylglycerol kinase kappa ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); intracellular signal transduction (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955543 1468328 1601101 - 102017385 AGCD01071623;AGCD01071624;AGCD01071625;XM_005411355 XP_005411412 MODEL 8872046 protein-coding Slc24a1 solute carrier family 24 member 1 ENCODES a protein that exhibits calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); intracellular calcium ion homeostasis (ortholog); potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH Cerebral Hemorrhage (ortholog); congenital stationary night blindness (ortholog); congenital stationary night blindness 1D (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); rod photoreceptor outer segment (ortholog) NW_004955450 9850170 9881172 - 102005093 AGCD01042600;GBBH01101110;XM_005393714;XM_005393715;XM_005393716;XM_013518968;XM_013518969 XP_005393771;XP_005393772;XP_005393773;XP_013374422;XP_013374423 MODEL 8758984 protein-coding Rapgef4 Rap guanine nucleotide exchange factor 4 ENCODES a protein that exhibits cAMP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); Burns (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955449 2172354 2453367 - 102011601 AGCD01041823;AGCD01041824;AGCD01041825;AGCD01041826;AGCD01041827;GBDK01319992;XM_005393202;XM_005393203;XM_005393204;XM_005393205;XM_005393208;XM_013518783;XM_013518784;XM_013518785 XP_005393259;XP_005393260;XP_005393261;XP_005393262;XP_005393265;XP_013374237;XP_013374238;XP_013374239 MODEL 8887285 protein-coding Xpot exportin for tRNA ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN tRNA export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear pore (ortholog) NW_004955458 11162612 11206515 + 102020214 AGCD01047726;AGCD01047727;AGCD01047728;AGCD01047729;AGCD01047730;GBCQ01038249;XM_005397439;XM_013520915;XM_013520916;XM_013520917;XM_013520918 XP_005397496;XP_013376369;XP_013376370;XP_013376371;XP_013376372 MODEL 8743020 protein-coding Ddb1 damage specific DNA binding protein 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); damaged DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); cellular response to UV (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) NW_004955511 6209777 6233594 + 102017262 AGCD01066598;GBCQ01006346;XM_005408163 XP_005408220 MODEL 8810304 protein-coding Foxo4 forkhead box O4 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of angiogenesis (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH alcohol-induced mental disorder (ortholog); gastric ulcer (ortholog); hemangioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955475 10666024 10673717 + 102028959 AGCD01055108;GBCB01003664;XM_005401642 XP_005401699 MODEL 8951860 protein-coding LOC102025273 olfactory receptor 4C16-like NW_004955511 350502 351545 + 102025273 AGCD01066328;XM_005407942 XP_005407999 MODEL 9004368 protein-coding Ppp1r15a protein phosphatase 1 regulatory subunit 15A ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); molecular adaptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to antibiotic (ortholog); cellular response to calcium ion starvation (ortholog); cellular response to carbohydrate stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute-On-Chronic Liver Failure (ortholog); Amaurosis Fugax (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955559 1750227 1753607 - 102029674 AGCD01073666;GBCQ01101763;XM_005412927 XP_005412984 MODEL 8974694 protein-coding LOC102007857 gamma-crystallin A NW_004955457 6963680 6966414 + 102007857 AGCD01046861;XM_005396969 XP_005397026 MODEL 9010431 protein-coding LOC102012634 olfactory receptor 481 NW_004955414 23630286 23633450 + 102012634 AGCD01015508;AGCD01015509;XM_005380206 XP_005380263 MODEL 9041247 protein-coding Camkk1 calcium/calmodulin dependent protein kinase kinase 1 ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); positive regulation of protein kinase activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955467 12973667 13002098 + 102017321 AGCD01051661;GBBH01198888;XM_005399704;XM_013522156;XM_013522157;XM_013522158 XP_005399761;XP_013377610;XP_013377611;XP_013377612 MODEL 730468980 snorna SNORA61 Small nucleolar RNA SNORA61 8943519 protein-coding CUNH10orf53 chromosome unknown C10orf53 homolog ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955556 625327 640289 - 102028025 AGCD01073178;GBBH01141531;XM_005412566 XP_005412623 MODEL 8989794 protein-coding LOC102029888 olfactory receptor 5D13-like NW_004955511 506088 514969 + 102029888 AGCD01066332;AGCD01066333;XM_013506358 XP_013361812 MODEL 8816327 protein-coding Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 ENCODES a protein that exhibits structural constituent of postsynaptic density (ortholog); INVOLVED IN dense core granule cytoskeletal transport (ortholog); in utero embryonic development (ortholog); regulation of dendritic spine development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955478 8370813 8757132 - 102003127 AGCD01056024;AGCD01056025;AGCD01056026;AGCD01056027;AGCD01056028;AGCD01056029;AGCD01056030;AGCD01056031;AGCD01056032;AGCD01056033;AGCD01056034;AGCD01056035;AGCD01056036;AGCD01056037;AGCD01056038;AGCD01056039;GBDF01252904;XM_005402226;XM_005402228;XM_005402229;XM_005402230;XM_005402233;XM_013503196 XP_005402283;XP_005402285;XP_005402286;XP_005402287;XP_005402290;XP_013358650 MODEL 8922241 protein-coding Ptpn22 protein tyrosine phosphatase non-receptor type 22 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN cellular response to muramyl dipeptide (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH Addison's disease (ortholog); alopecia areata (ortholog); Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); nucleus (ortholog) NW_004955435 17082762 17139067 - 102014165 AGCD01033345;GBDK01393931;XM_005388984 XP_005389041 MODEL 8778156 protein-coding LOC102005607 uncharacterized protein C7orf34 homolog NW_004955494 875367 876635 + 102005607 AGCD01061387;GBDF01006174;XM_005405389;XM_005405390 XP_005405446;XP_005405447 MODEL 8994755 protein-coding Samd12 sterile alpha motif domain containing 12 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); familial adult myoclonic epilepsy 1 (ortholog) NW_004955417 24137340 24541572 - 102003765 AGCD01018453;AGCD01018454;AGCD01018455;AGCD01018456;AGCD01018457;AGCD01018458;AGCD01018459;AGCD01018460;AGCD01018461;AGCD01018462;AGCD01018463;GBDJ01028414;XM_005381901;XM_005381902;XM_005381903;XM_005381904;XM_013512785;XM_013512787;XM_013512788 XP_005381958;XP_005381959;XP_005381960;XP_005381961;XP_013368239;XP_013368241;XP_013368242 MODEL 8727811 protein-coding Efs embryonal Fyn-associated substrate ENCODES a protein that exhibits protein domain specific binding (ortholog); SH3 domain binding (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955409 36973522 36981079 + 102021103 AGCD01010485;GBBH01207846;XM_005377079;XM_005377081 XP_005377136;XP_005377138 MODEL 8778824 protein-coding Lrrk2 leucine rich repeat kinase 2 ENCODES a protein that exhibits actin binding (ortholog); beta-catenin destruction complex binding (ortholog); clathrin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to curcumin (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN amphisome (ortholog); autolysosome (ortholog); axon (ortholog) NW_004955505 84324 216923 - 102028660 AGCD01064948;AGCD01064949;AGCD01064950;GBBH01075475;GBDK01182204;XM_013505951 XP_013361405 MODEL 39134381 misc_rna 7SK 7SK RNA 8911053 ncrna LOC102003836 uncharacterized LOC102003836 NW_004955407 41449979 41453452 + 102003836 AGCD01007866;XR_259639 MODEL 9060122 pseudo LOC102013004 L-lactate dehydrogenase A chain pseudogene NW_004955537 2130074 2131685 + 102013004 AGCD01070918;XR_264773 MODEL 8803378 protein-coding Sipa1l2 signal induced proliferation associated 1 like 2 INVOLVED IN presynaptic signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density, intracellular component (ortholog); presynapse (ortholog) NW_004955492 6611430 6709016 + 102004492 AGCD01060770;AGCD01060771;GBDF01252947;XM_013504726;XM_013504727;XM_013504728;XM_013504729 XP_013360180;XP_013360181;XP_013360182;XP_013360183 MODEL 9049014 protein-coding Emc2 ER membrane protein complex subunit 2 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog); endoplasmic reticulum (ortholog) NW_004955417 31019389 31048143 + 102003445 AGCD01018638;GBDJ01140382;XM_005381969;XM_005381970;XM_005381971 XP_005382026;XP_005382027;XP_005382028 MODEL 39132418 rrna 5S_rRNA 5S ribosomal RNA 9031508 protein-coding Dydc1 DPY30 domain containing 1 ASSOCIATED WITH melanoma (ortholog); FOUND IN radial spoke (ortholog) NW_004955510 319535 337268 - 102027211 AGCD01066145;GBDF01043580;XM_005407870 XP_005407927 MODEL 8864704 pseudo LOC102006714 prostaglandin E synthase 3 pseudogene NW_004955441 1043090 1044707 - 102006714 AGCD01036746 MODEL 8933501 pseudo LOC102007860 60S ribosomal protein L5-like NW_004955408 33188427 33213642 + 102007860 AGCD01008863 MODEL 39133499 snrna U4 U4 spliceosomal RNA 8735654 protein-coding Ccl24 C-C motif chemokine ligand 24 ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); chemotaxis (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955456 14582812 14588574 - 102005566 AGCD01046645;GBCE01108374;XM_013520511 XP_013375965 MODEL 8964897 pseudo LOC102010546 ras-related protein Rab-5A-like NW_004955455 241706 244246 - 102010546 AGCD01045555 MODEL 8820864 protein-coding LOC102003475 olfactory receptor 5D18-like NW_004955511 551616 552566 - 102003475 AGCD01066333;XM_005408199 XP_005408256 MODEL 8740154 protein-coding Rab25 RAB25, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); myosin V binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog); pseudopodium (ortholog) NW_004955545 2243237 2250507 + 102020487 AGCD01071891;GBDI01021690;XM_005411651;XM_013508333 XP_005411708;XP_013363787 MODEL 8929159 protein-coding Bcl2l13 BCL2 like 13 INVOLVED IN apoptotic process (ortholog); ATP biosynthetic process (ortholog); canonical glycolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) NW_004955454 5692027 5770897 + 102004892 AGCD01045182;AGCD01045183;AGCD01045184;AGCD01045185;AGCD01045186;AGCD01045187;GBDJ01295690;XM_005395979;XM_005395980;XM_013520178;XM_013520179;XM_013520180;XM_013520181 XP_005396036;XP_005396037;XP_013375632;XP_013375633;XP_013375634;XP_013375635 MODEL 8968765 protein-coding Rhbdf1 rhomboid 5 homolog 1 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955442 17090962 17098068 + 102009327 AGCD01037937;GBDJ01079685;GBDJ01079692;XM_005391681 XP_005391738 MODEL 9035296 protein-coding Xpr1 xenotropic and polytropic retrovirus receptor 1 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); inositol hexakisphosphate binding (ortholog); phosphate transmembrane transporter activity (ortholog); INVOLVED IN intracellular phosphate ion homeostasis (ortholog); phosphate ion transmembrane transport (ortholog); response to virus (ortholog); ASSOCIATED WITH basal ganglia disease (ortholog); Breast Cancer, Familial (ortholog); calcinosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 19831398 19980994 + 102011949 AGCD01006093;AGCD01006094;AGCD01006095;GBDF01122624;XM_013503153 XP_013358607 MODEL 8999725 protein-coding Coxfa4l3 cytochrome c oxidase associated subunit FA4L3 INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) NW_004955409 8023847 8027043 - 102020092 AGCD01009374;GBDF01009619;XM_005376729;XM_005376730 XP_005376786;XP_005376787 MODEL 8828799 pseudo LOC102011339 actin filament-associated protein 1-like 2 pseudogene NW_004955503 4487948 4488394 + 102011339 AGCD01064669 MODEL 8939220 protein-coding Ddb2 damage specific DNA binding protein 2 ENCODES a protein that exhibits damaged DNA binding (ortholog); protein-containing complex binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); nucleotide-excision repair (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH genetic disease (ortholog); melanoma (ortholog); ovarian cancer (ortholog); FOUND IN chromosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955422 961602 977066 - 102028867 AGCD01022442;AGCD01022443;GBCQ01117857;XM_005383999;XM_013513922;XR_001233894;XR_001233895;XR_001233896 XP_005384056;XP_013369376 MODEL 9010642 protein-coding Ppp1r15b protein phosphatase 1 regulatory subunit 15B ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); molecular adaptor activity (ortholog); protein phosphatase 1 binding (ortholog); INVOLVED IN ER overload response (ortholog); response to endoplasmic reticulum stress (ortholog); response to hydrogen peroxide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN protein phosphatase type 1 complex (ortholog) NW_004955406 40232516 40238711 - 102024874 AGCD01006658;GBDF01119554;XM_013522788 XP_013378242 MODEL 8926760 protein-coding LOC102013015 mastin-like NW_004955442 15945683 15947421 + 102013015 AGCD01037888;GBDF01098386;XM_013517711 XP_013373165 MODEL 9027013 ncrna LOC102022102 uncharacterized LOC102022102 NW_004955424 22345842 22349200 - 102022102 AGCD01024963;GBDF01279008;XR_261101 MODEL 8802791 ncrna LOC102006338 uncharacterized LOC102006338 NW_004955472 12747044 12750245 - 102006338 AGCD01053814;GBDJ01152684;XR_263575 MODEL 8750141 protein-coding Tkt transketolase ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN D-xylulose 5-phosphate biosynthetic process (ortholog); glyceraldehyde-3-phosphate biosynthetic process (ortholog); pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); nuclear body (ortholog) NW_004955430 3178830 3193241 - 102029887 AGCD01029194;GBCE01001144;GBDF01082121;XM_005387366 XP_005387423 MODEL 8893790 pseudo LOC102012636 40S ribosomal protein S2 pseudogene NW_004955472 1057016 1058005 - 102012636 AGCD01053370 MODEL 10316760 ncrna LOC106148579 uncharacterized LOC106148579 NW_004955402 1276064 1277205 - 106148579 AGCD01000052;GBDF01307402;XR_001234160 MODEL 8884829 protein-coding Camkk2 calcium/calmodulin dependent protein kinase kinase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); CAMKK-AMPK signaling cascade (ortholog); positive regulation of autophagy of mitochondrion (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955482 7000010 7029623 + 102018094 AGCD01057435;GBDI01290549;XM_005403133;XM_005403135;XM_005403136;XM_013503675;XM_013503676;XM_013503677 XP_005403190;XP_005403192;XP_005403193;XP_013359129;XP_013359130;XP_013359131 MODEL 10164899 ncrna LOC106147491 uncharacterized LOC106147491 NW_004955567 764426 768708 - 106147491 AGCD01074432;GBDF01306347;XR_001232421 MODEL 730469284 snorna SNORD66 Small nucleolar RNA SNORD66 39131728 rrna 5S_rRNA 5S ribosomal RNA 8776368 protein-coding Chrng cholinergic receptor nicotinic gamma subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); regulation of membrane potential (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); bone development disease (ortholog); cholangiocarcinoma (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) NW_004955453 3425603 3432695 - 102014863 AGCD01044658;GBDF01100651;XM_005395371;XM_005395372;XM_005395376 XP_005395428;XP_005395429;XP_005395433 MODEL 8744950 protein-coding Cp ceruloplasmin ENCODES a protein that exhibits copper ion binding (ortholog); ferroxidase activity (ortholog); glutathione peroxidase activity (ortholog); INVOLVED IN CAMKK-AMPK signaling cascade (ortholog); fatty acid oxidation (ortholog); female pregnancy (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; iron efflux pathway; ASSOCIATED WITH aceruloplasminemia (ortholog); acute kidney failure (ortholog); Albuminuria (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955448 470063 522909 - 102016651 AGCD01041232;AGCD01041233;GBDI01091505;XM_005392985;XM_005392987;XM_005392988;XM_013518624 XP_005393042;XP_005393044;XP_005393045;XP_013374078 MODEL 8925348 ncrna LOC102005277 uncharacterized LOC102005277 NW_004955425 6668270 6682257 - 102005277 AGCD01025372;GBDF01088350;XR_001234268;XR_001234269 MODEL 8884318 ncrna LOC102024169 uncharacterized LOC102024169 NW_004955443 19903033 19910517 + 102024169 AGCD01038639;GBBH01044033;XR_001235444;XR_001235445;XR_001235446 MODEL 9029266 protein-coding Dgkq diacylglycerol kinase theta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to bile acid (ortholog); diacylglycerol metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955514 452548 475240 - 102004415 AGCD01067010;AGCD01067011;GBCB01099242;XM_005408848 XP_005408905 MODEL 8787441 protein-coding Slc24a2 solute carrier family 24 member 2 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cone photoreceptor outer segment (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955434 21871319 22091125 - 102028225 AGCD01032658;AGCD01032659;AGCD01032660;GBCB01100094;GBCQ01087320;XM_013516390 XP_013371844 MODEL 39133820 misc_rna 7SK 7SK RNA 8846217 protein-coding Samd13 sterile alpha motif domain containing 13 ASSOCIATED WITH esophageal cancer (ortholog); high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955423 9531538 9574312 - 102003979 AGCD01023662;GBDF01083942;XM_005385162;XM_005385163;XM_005385164;XM_013514573;XM_013514574 XP_005385219;XP_005385220;XP_005385221;XP_013370027;XP_013370028 MODEL 8838597 protein-coding Ipcef1 interaction protein for cytohesin exchange factors 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); lymphoid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955439 7666246 7836481 + 102023296 AGCD01035772;AGCD01035773;AGCD01035774;AGCD01035775;AGCD01035776;GBDI01386749;XM_005390558;XM_005390559;XM_005390561;XM_013517366;XM_013517367;XM_013517368;XM_013517369;XM_013517370;XM_013517371 XP_005390615;XP_005390616;XP_005390618;XP_013372820;XP_013372821;XP_013372822;XP_013372823;XP_013372824;XP_013372825 MODEL 8727359 protein-coding Rapgef5 Rap guanine nucleotide exchange factor 5 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 24525748 24716151 - 102007634 AGCD01011131;AGCD01011132;AGCD01011133;AGCD01011134;GBBH01203298;XM_005377379 XP_005377436 MODEL 8858247 protein-coding LOC102025985 T-cell surface glycoprotein CD1c3-like NW_004955462 1490616 1494592 - 102025985 AGCD01049124;GBBH01132147;GBDK01092910;XM_005398317;XM_013521351 XP_005398374;XP_013376805 MODEL 8818875 protein-coding Eftud2 elongation factor Tu GTP binding domain containing 2 INVOLVED IN cellular response to xenobiotic stimulus (ortholog); mRNA splicing, via spliceosome (ortholog); response to cocaine (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog) NW_004955451 17655659 17690117 - 102020875 AGCD01043765;AGCD01043766;AGCD01043767;GBBH01001764;XM_005394553 XP_005394610 MODEL 8984553 protein-coding LOC102009387 bile acid-CoA:amino acid N-acyltransferase-like NW_004955419 24443222 24466306 + 102009387 AGCD01020347;GBDJ01035584;XM_005382801;XM_013513082 XP_005382858;XP_013368536 MODEL 9034461 protein-coding Armc8 armadillo repeat containing 8 ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955501 705967 800884 - 102008643 AGCD01064038;AGCD01064039;AGCD01064040;GBDK01360569;XM_005406741;XM_005406746;XM_013505762;XM_013505763;XM_013505764 XP_005406798;XP_005406803;XP_013361216;XP_013361217;XP_013361218 MODEL 730469494 snorna SNORA61 Small nucleolar RNA SNORA61 39132419 rrna 5S_rRNA 5S ribosomal RNA 8934652 protein-coding Polr2e RNA polymerase II, I and III subunit E INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Dwarfism (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase I complex (ortholog) NW_004955495 6779557 6788241 + 102012554 AGCD01062093;AGCD01062094;GBDJ01005001;XM_005405996 XP_005406053 MODEL 9056905 protein-coding CUNH10orf62 chromosome unknown C10orf62 homolog NW_004955507 3691334 3692636 + 102028664 AGCD01065632;GBDK01273929;XM_005407615 XP_005407672 MODEL 8812521 protein-coding Tspan2 tetraspanin 2 INVOLVED IN astrocyte development (ortholog); axon development (ortholog); inflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN myelin sheath (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955435 18344320 18371248 - 102003689 AGCD01033403;GBCB01057093;XM_013516547;XM_013516548 XP_013372001;XP_013372002 MODEL 9038065 protein-coding LOC102005611 bcl-2-like protein 13 NW_004955423 25019836 25046086 + 102005611 AGCD01024050;AGCD01024051;XM_013514366 XP_013369820 MODEL 9007207 protein-coding Ccl25 C-C motif chemokine ligand 25 ENCODES a protein that exhibits CCR10 chemokine receptor binding (ortholog); chemokine activity (ortholog); chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell chemotaxis (ortholog); chemotaxis (ortholog); ASSOCIATED WITH Jaundice (ortholog); ovarian serous cystadenocarcinoma (ortholog); pleurisy (ortholog) NW_004955563 1249098 1255469 - 102016432 AGCD01074137;GBDJ01143526;XM_005413136 XP_005413193 MODEL 8887735 protein-coding Tango2 transport and golgi organization 2 homolog ASSOCIATED WITH Alstrom syndrome (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955442 18036477 18074036 - 102026680 AGCD01037995;GBDF01086531;XM_005391746;XM_013517770;XM_013517771;XM_013517772;XM_013517773;XM_013517774;XM_013517775 XP_005391803;XP_013373224;XP_013373225;XP_013373226;XP_013373227;XP_013373228;XP_013373229 MODEL 8914520 ncrna LOC102003476 uncharacterized LOC102003476 NW_004955431 22858925 22862195 + 102003476 AGCD01030524;GBDJ01402645;XR_261494 MODEL 8880610 protein-coding LOC102010548 keratin-associated protein 20-2-like NW_004955407 30234861 30239217 - 102010548 AGCD01007628;AGCD01007629;XM_005375651;XM_013506303 XP_005375708;XP_013361757 MODEL 8763983 protein-coding Lrrn1 leucine rich repeat neuronal 1 INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog) NW_004955421 9519468 9558038 - 102020922 AGCD01021850;AGCD01021851;GBDJ01307945;XM_005383746 XP_005383803 MODEL 8955800 protein-coding Foxo6 forkhead box O6 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN memory (ortholog); positive regulation of dendritic spine development (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955537 1108711 1129287 + 102016094 AGCD01070887;AGCD01070888;AGCD01070889;GBDF01278237;XM_013507743 XP_013363197 MODEL 9015771 protein-coding Emc3 ER membrane protein complex subunit 3 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955561 1442953 1459988 - 102016760 AGCD01073855;GBDF01004644;XM_005413063 XP_005413120 MODEL 8885008 protein-coding Chst1 carbohydrate sulfotransferase 1 ENCODES a protein that exhibits keratan sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN galactose metabolic process (ortholog); keratan sulfate proteoglycan biosynthetic process (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog) NW_004955422 2269791 2274714 + 102020454 AGCD01022483;GBCE01155996;XM_005384071 XP_005384128 MODEL 8994435 protein-coding Sipa1l3 signal induced proliferation associated 1 like 3 INVOLVED IN cytoskeleton organization (ortholog); epithelial cell morphogenesis (ortholog); establishment of epithelial cell polarity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cataract 45 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); glutamatergic synapse (ortholog) NW_004955468 1212102 1438527 - 102023344 AGCD01051762;AGCD01051763;AGCD01051764;AGCD01051765;AGCD01051766;AGCD01051767;AGCD01051768;GBDF01067550;XM_005399879;XM_013522426 XP_005399936;XP_013377880 MODEL 8838452 protein-coding Ipmk inositol polyphosphate multikinase ENCODES a protein that exhibits 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); flavonoid binding (ortholog); inositol-1,3,4,5-tetrakisphosphate 6-kinase activity (ortholog); INVOLVED IN inositol phosphate biosynthetic process (ortholog); inositol trisphosphate metabolic process (ortholog); necroptotic process (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955425 11949849 12000610 - 102018847 AGCD01025496;GBDK01187137;XM_013514870;XM_013514871 XP_013370324;XP_013370325 MODEL 8752118 ncrna LOC102029891 uncharacterized LOC102029891 NW_004955431 5029371 5032436 - 102029891 AGCD01030014;GBDF01207158;XR_261447;XR_261448 MODEL 8929704 protein-coding Rhbdf2 rhomboid 5 homolog 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN gene expression (ortholog); hair cell differentiation (ortholog); hair follicle cell proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatoblastoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955506 5805415 5828286 + 102023826 AGCD01065390;GBDK01396584;XM_005407428 XP_005407485 MODEL 8725832 protein-coding Dydc2 DPY30 domain containing 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955510 337286 348640 + 102026895 AGCD01066145;GBDF01053016;XM_013506330 XP_013361784 MODEL 8893553 ncrna LOC102006718 uncharacterized LOC102006718 NW_004955443 8651958 8680827 - 102006718 AGCD01038333;GBDF01053223;XR_001235434;XR_001235435;XR_001235436;XR_001235437;XR_001235438;XR_001235439;XR_262189;XR_262190 MODEL 8810528 protein-coding Extl3 exostosin like glycosyltransferase 3 ENCODES a protein that exhibits glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute necrotizing pancreatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) NW_004955403 51076323 51102435 + 102015272 AGCD01002988;GBDF01192978;XM_005373777;XM_005373778;XM_005373779;XM_005373780 XP_005373834;XP_005373835;XP_005373836;XP_005373837 MODEL 8912012 ncrna LOC102013017 uncharacterized LOC102013017 NW_004955444 2369111 2395806 - 102013017 AGCD01038759;AGCD01038760;AGCD01038761;GBDJ01063177;XR_001235512;XR_001235513;XR_001235514 MODEL 8885648 ncrna LOC102012639 uncharacterized LOC102012639 NW_004955415 32915416 32918889 - 102012639 AGCD01016740;GBBH01160712;XR_260334 MODEL 8714406 protein-coding LOC102025274 olfactory receptor 9I1-like NW_004955511 2929294 2930226 + 102025274 AGCD01066436;XM_005408021 XP_005408078 MODEL 8904930 pseudo LOC102003840 matrin-3 pseudogene NW_004955408 32750191 32754243 - 102003840 AGCD01008854 MODEL 9062876 pseudo LOC102005282 uncharacterized protein C8orf59 homolog NW_004955429 2855876 2858540 - 102005282 AGCD01028442 MODEL 8709553 ncrna LOC102024170 uncharacterized LOC102024170 NW_004955445 701392 713169 + 102024170 AGCD01039323;GBDK01292464;XR_001235572;XR_001235573;XR_262289 MODEL 8762260 protein-coding Cpa1 carboxypeptidase A1 ENCODES a protein that exhibits exopeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); INVOLVED IN protein catabolic process (ortholog); response to cadmium ion (ortholog); ASSOCIATED WITH Anorexia (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN extracellular region (ortholog) NW_004955479 11011928 11017908 + 102018092 AGCD01056570;XM_005402443 XP_005402500 MODEL 9050479 ncrna LOC102011343 uncharacterized LOC102011343 NW_004955507 2011410 2055347 - 102011343 AGCD01065577;AGCD01065578;GBDK01390619;XR_001231618;XR_264370 MODEL 8865675 protein-coding Bcl2l14 BCL2 like 14 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955413 9040272 9069266 + 102012624 AGCD01013891;AGCD01013892;GBDF01045938;XM_005378949;XM_005378950;XM_005378951;XM_005378952;XM_005378953;XM_005378954;XM_005378955;XM_005378956;XM_013511475;XM_013511476;XM_013511478 XP_005379006;XP_005379007;XP_005379008;XP_005379009;XP_005379010;XP_005379011;XP_005379012;XP_005379013;XP_013366929;XP_013366930;XP_013366932 MODEL 8827158 ncrna LOC102006342 uncharacterized LOC102006342 NW_004955415 25402361 25405667 + 102006342 AGCD01016581;GBDF01097468;XR_260314 MODEL 9001204 protein-coding LOC102025986 glutathione S-transferase A-like NW_004955411 5147568 5305083 + 102025986 AGCD01011600;AGCD01011601;AGCD01011602;AGCD01011603;AGCD01011604;AGCD01011605;AGCD01011606;AGCD01011607;AGCD01011608;AGCD01011609;AGCD01011610;AGCD01011611;AGCD01011612;AGCD01011613;AGCD01011614;AGCD01011615;AGCD01011616;AGCD01011617;AGCD01011618;AGCD01011619;AGCD01011620;AGCD01011621;AGCD01011622;AGCD01011623;AGCD01011624;AGCD01011625;AGCD01011626;AGCD01011627;XM_005377650;XM_005377651 XP_005377707;XP_005377708 MODEL 9009025 protein-coding Rapgef6 Rap guanine nucleotide exchange factor 6 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); positive regulation of microvillus assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); endocytic vesicle (ortholog) NW_004955408 2902530 3109273 - 102021314 AGCD01008041;AGCD01008042;AGCD01008043;AGCD01008044;AGCD01008045;AGCD01008046;AGCD01008047;GBCE01055755;XM_005376072 XP_005376129 MODEL 8898264 protein-coding Ptpn23 protein tyrosine phosphatase non-receptor type 23 ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 24869737 24897196 - 102014365 AGCD01021337;AGCD01021338;GBDF01119078;XM_005383401 XP_005383458 MODEL 8894167 protein-coding Tktl1 transketolase like 1 ENCODES a protein that exhibits transketolase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955580 829653 851422 + 102027129 AGCD01075625;AGCD01075626;GBDF01008565;XM_005414185 XP_005414242 MODEL 10267435 ncrna LOC106148580 uncharacterized LOC106148580 NW_004955424 25753714 25779039 + 106148580 AGCD01025050;AGCD01025051;AGCD01025052;AGCD01025053;GBDF01290250;XR_001234149;XR_001234150 MODEL 9026560 protein-coding LOC102018772 keratin, type II cytoskeletal 6C-like NW_004955547 2822399 2871054 - 102018772 AGCD01072294;AGCD01072295;AGCD01072296;AGCD01072297;AGCD01072298;AGCD01072299;GBDI01355999;XM_013508446 XP_013363900 MODEL 39134382 misc_rna 7SK 7SK RNA 39133772 snorna SNORD67 Small nucleolar RNA SNORD67 10260254 ncrna LOC106147492 uncharacterized LOC106147492 NW_004955567 883151 885150 - 106147492 AGCD01074443;GBDF01251944;XR_001232422 MODEL 8968002 protein-coding CUNH10orf71 chromosome unknown C10orf71 homolog INVOLVED IN cardiac muscle cell contraction (ortholog); cardiac muscle cell differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); dilated cardiomyopathy 10Q (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Z disc (ortholog) NW_004955556 894707 917196 - 102003387 AGCD01073179;GBCB01007197;XM_005412570;XM_005412571;XM_005412572 XP_005412627;XP_005412628;XP_005412629 MODEL 8998264 protein-coding Rhbdl1 rhomboid like 1 ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955442 16525009 16528780 - 102021604 AGCD01037901;GBDF01194169;XM_005391625;XM_005391626;XM_005391627;XM_013517764;XM_013517765;XM_013517766 XP_005391682;XP_005391683;XP_005391684;XP_013373218;XP_013373219;XP_013373220 MODEL 8994793 protein-coding Rab26 RAB26, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GMP binding (ortholog); GTP binding (ortholog); INVOLVED IN exocrine system development (ortholog); Golgi to plasma membrane protein transport (ortholog); regulated exocytosis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog); secretory granule membrane (ortholog) NW_004955442 15114333 15119481 - 102004014 AGCD01037859;GBBH01180568;XM_005391459;XM_005391461;XM_005391463;XM_005391464;XM_013517638 XP_005391516;XP_005391518;XP_005391520;XP_005391521;XP_013373092 MODEL 39133821 misc_rna 7SK 7SK RNA 8917381 protein-coding Ccl26 C-C motif chemokine ligand 26 ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); CX3C chemokine receptor binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); chemokine-mediated signaling pathway (ortholog); monocyte chemotaxis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); allergic rhinitis (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog) NW_004955456 14554583 14558967 - 102005229 AGCD01046642;AGCD01046643;AGCD01046644;GBDI01244810;XM_005396799 XP_005396856 MODEL 8821435 protein-coding Ptpn3 protein tyrosine phosphatase non-receptor type 3 ENCODES a protein that exhibits ATPase binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN liver regeneration (ortholog); negative regulation of membrane protein ectodomain proteolysis (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955419 17560664 17645420 + 102018833 AGCD01020159;GBBH01026019;GBCQ01067663;XM_013513248 XP_013368702 MODEL 8700387 protein-coding Dgkz diacylglycerol kinase zeta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); enzyme inhibitor activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) NW_004955422 1658237 1687000 - 102009511 AGCD01022468;AGCD01022469;GBDI01006776;XM_005384031;XM_005384033;XM_005384035;XM_005384038;XM_013514024 XP_005384088;XP_005384090;XP_005384092;XP_005384095;XP_013369478 MODEL 8865835 protein-coding Xrcc1 X-ray repair cross complementing 1 ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); enzyme binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage response (ortholog); DNA repair (ortholog); PARTICIPATES IN base excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH 5 Alpha Fluorouracil Toxicity (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955555 1293416 1315839 - 102016958 AGCD01073070;AGCD01073071;AGCD01073072;GBDF01053241;XM_005412443;XM_005412444 XP_005412500;XP_005412501 MODEL 8884290 protein-coding Egf epidermal growth factor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; ceramide signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN extracellular exosome (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955496 325954 401430 - 102024024 AGCD01062225;GBCQ01008809;XM_005406183;XM_013505425 XP_005406240;XP_013360879 MODEL 39133500 snrna U4 U4 spliceosomal RNA 730469040 snorna SNORA61 Small nucleolar RNA SNORA61 39132424 rrna 5S_rRNA 5S ribosomal RNA 8757030 protein-coding LOC102022110 olfactory receptor 8K5-like NW_004955511 5121480 5122424 + 102022110 AGCD01066549;XM_005408086 XP_005408143 MODEL 8859831 protein-coding Ddc dopa decarboxylase ENCODES a protein that exhibits 5-hydroxy-L-tryptophan decarboxylase activity (ortholog); amino acid binding (ortholog); aromatic-L-amino-acid decarboxylase activity (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); cellular response to alkaloid (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); aromatic L-amino acid decarboxylase deficiency (ortholog); astigmatism (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955456 3513779 3582851 + 102027270 AGCD01046276;GBCQ01100816;XM_005396601;XM_005396602;XM_005396603;XM_005396605;XM_013520640 XP_005396658;XP_005396659;XP_005396660;XP_005396662;XP_013376094 MODEL 8804479 protein-coding Armc9 armadillo repeat containing 9 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atopic dermatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) NW_004955453 4202540 4294548 - 102021940 AGCD01044684;AGCD01044685;AGCD01044686;GBBH01114523;XM_005395396;XM_005395397;XM_013519879;XM_013519880;XM_013519881;XM_013519882;XM_013519884;XM_013519885;XM_013519886;XM_013519887;XM_013519888;XM_013519889;XM_013519890;XR_001236179 XP_005395453;XP_005395454;XP_013375333;XP_013375334;XP_013375335;XP_013375336;XP_013375338;XP_013375339;XP_013375340;XP_013375341;XP_013375342;XP_013375343;XP_013375344 MODEL 8829581 protein-coding Foxp1 forkhead box P1 ENCODES a protein that exhibits chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to tumor necrosis factor (ortholog); DNA damage response (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); amblyopia (ortholog); anxiety disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955421 16595445 17075923 + 102003143 AGCD01022006;AGCD01022007;AGCD01022008;AGCD01022009;AGCD01022010;AGCD01022011;AGCD01022012;AGCD01022013;AGCD01022014;GBDF01207729;XM_005383772;XM_005383776;XM_005383777;XM_005383778;XM_005383779;XM_013513674;XM_013513675;XM_013513676;XM_013513677;XM_013513678 XP_005383829;XP_005383833;XP_005383834;XP_005383835;XP_005383836;XP_013369128;XP_013369129;XP_013369130;XP_013369131;XP_013369132 MODEL 8830393 pseudo LOC102029894 dnaJ homolog subfamily B member 6-like NW_004955432 9168685 9170676 - 102029894 AGCD01030898 MODEL 39131729 rrna 5S_rRNA 5S ribosomal RNA 9019370 protein-coding Polr2f RNA polymerase II, I and III subunit F INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 24300340 24309798 + 102013404 AGCD01014360;GBDF01005505;XM_005379236 XP_005379293 MODEL 8805796 protein-coding LOC102013019 nuclear factor interleukin-3-regulated protein NW_004955563 825025 844211 - 102013019 AGCD01074090;AGCD01074091;XM_005413205 XP_005413262 MODEL 8763266 protein-coding Ipo11 importin 11 NW_004955446 6034277 6225627 - 102025188 AGCD01040085;AGCD01040086;AGCD01040087;AGCD01040088;AGCD01040089;AGCD01040090;GBCQ01123362;XM_005392641;XM_013518422 XP_005392698;XP_013373876 MODEL 8884411 protein-coding Eya1 EYA transcriptional coactivator and phosphatase 1 ENCODES a protein that exhibits histone H2AXY142 phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aorta morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH anterior segment dysgenesis (ortholog); Ataxia (ortholog); branchiooculofacial syndrome (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955444 8336071 8655041 + 102028140 AGCD01038933;AGCD01038934;AGCD01038935;AGCD01038936;AGCD01038937;AGCD01038938;AGCD01038939;AGCD01038940;AGCD01038941;AGCD01038942;AGCD01038943;GBCE01186170;XM_013518202;XM_013518203;XM_013518204;XM_013518205;XM_013518206;XM_013518207;XM_013518208;XM_013518209;XM_013518210;XM_013518211;XM_013518212;XM_013518213;XM_013518214 XP_013373656;XP_013373657;XP_013373658;XP_013373659;XP_013373660;XP_013373661;XP_013373662;XP_013373663;XP_013373664;XP_013373665;XP_013373666;XP_013373667;XP_013373668 MODEL 8776911 pseudo LOC102003478 pre-mRNA-splicing regulator WTAP-like NW_004955514 116863 117609 + 102003478 AGCD01066997 MODEL 8883672 protein-coding LOC102005616 cytochrome P450 2C18-like NW_004955507 1041847 1146933 + 102005616 AGCD01065501;AGCD01065502;AGCD01065503;AGCD01065504;AGCD01065505;AGCD01065506;AGCD01065507;AGCD01065508;AGCD01065509;AGCD01065510;AGCD01065511;AGCD01065512;AGCD01065513;AGCD01065514;AGCD01065515;AGCD01065516;GBDF01111538;XM_013506232 XP_013361686 MODEL 8763015 protein-coding Samd14 sterile alpha motif domain containing 14 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hereditary breast ovarian cancer syndrome (ortholog); lung cancer (ortholog) NW_004955451 11536639 11547402 + 102016012 AGCD01043358;AGCD01043359;GBDF01240504;GBDJ01056730;XM_013519104 XP_013374558 MODEL 8716687 protein-coding LOC102010566 olfactory receptor 151-like NW_004955412 25630768 25631700 + 102010566 AGCD01013166;XM_005378428 XP_005378485 MODEL 8975973 pseudo LOC102005284 olfactory receptor 5B3-like NW_004955511 3132708 3133618 - 102005284 AGCD01066444 MODEL 8727950 protein-coding Lrrn2 leucine rich repeat neuronal 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955406 40442680 40499945 - 102026715 AGCD01006661;GBCE01162909;XM_005375318 XP_005375375 MODEL 9032962 protein-coding LOC102007872 olfactory receptor 2B6-like NW_004955465 13408100 13409973 - 102007872 AGCD01050608;XM_005398953 XP_005399010 MODEL 8773613 protein-coding Emc4 ER membrane protein complex subunit 4 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955416 375736 380825 - 102019059 AGCD01016798;GBCB01023546;XM_005381153 XP_005381210 MODEL 9058986 protein-coding Siral1 SIR2 antiphage like 1 ENCODES a protein that exhibits identical protein binding (ortholog); NAD+ nucleosidase activity (ortholog); INVOLVED IN immune response (ortholog); regulation of toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955412 27239420 27287097 + 102029063 AGCD01013232;AGCD01013233;GBDK01318709;XM_005378495;XM_013511028;XM_013511029 XP_005378552;XP_013366482;XP_013366483 MODEL 8834714 protein-coding Cpa2 carboxypeptidase A2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH Hypoxia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955479 10909466 10937720 + 102015633 AGCD01056570;GBDF01128408;XM_005402433;XM_005402435;XM_005402436 XP_005402490;XP_005402492;XP_005402493 MODEL 8834882 protein-coding Ptpn4 protein tyrosine phosphatase non-receptor type 4 ENCODES a protein that exhibits glutamate receptor binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); membrane (ortholog) NW_004955459 9803421 9981392 - 102020217 AGCD01048171;AGCD01048172;AGCD01048173;AGCD01048174;AGCD01048175;AGCD01048176;AGCD01048177;GBDI01108232;XM_005397664;XM_013521057;XM_013521058;XM_013521059 XP_005397721;XP_013376511;XP_013376512;XP_013376513 MODEL 126903041 protein-coding DYDC2 DPY30 domain containing 2 9007688 protein-coding LOC102006343 cystatin-C-like NW_004955415 30580664 30583924 - 102006343 AGCD01016666;GBDF01051588;XM_005380974;XR_001233254 XP_005381031 MODEL 8802559 protein-coding Egfl6 EGF like domain multiple 6 INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog) NW_004955519 4557007 4616095 - 102027780 AGCD01067986;AGCD01067987;AGCD01067988;GBDJ01301779;XM_005409208 XP_005409265 MODEL 8947893 protein-coding LOC102025991 putative olfactory receptor 8G3 pseudogene NW_004955412 24956591 24957488 + 102025991 AGCD01013132;AGCD01013133;XM_005378643 XP_005378700 MODEL 8757432 protein-coding LOC102012640 cystatin-SA NW_004955415 30607068 30613196 - 102012640 AGCD01016666;XM_005381141 XP_005381198 MODEL 8819795 protein-coding Rapgefl1 Rap guanine nucleotide exchange factor like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); familial cold autoinflammatory syndrome 2 (ortholog) NW_004955451 14802094 14818096 + 102021076 AGCD01043573;AGCD01043574;AGCD01043575;GBDJ01262942;XM_013519122 XP_013374576 MODEL 150537114 snorna SNORD69 Small nucleolar RNA SNORD69 8872467 pseudo LOC102025275 heterogeneous nuclear ribonucleoprotein H3-like NW_004955429 20021277 20022100 - 102025275 AGCD01028976 MODEL 8959579 protein-coding CUNH10orf88 chromosome unknown C10orf88 homolog ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955477 1127067 1141360 - 102024111 AGCD01055503;GBDI01055762;XM_005401951 XP_005402008 MODEL 8782053 protein-coding Ppp1r16a protein phosphatase 1 regulatory subunit 16A ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian cancer (ortholog); sarcoma (ortholog) NW_004955454 3097218 3127896 + 102009458 AGCD01045051;AGCD01045052;AGCD01045053;AGCD01045054;AGCD01045055;AGCD01045056;AGCD01045057;GBCB01035513;XM_005395898;XM_005395899;XM_005395900 XP_005395955;XP_005395956;XP_005395957 MODEL 8812077 protein-coding Chst10 carbohydrate sulfotransferase 10 ENCODES a protein that exhibits HNK-1 sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); learning (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955470 6448167 6468386 - 102014550 AGCD01052771;GBBH01207463;XM_005400754;XM_013522834 XP_005400811;XP_013378288 MODEL 39133822 misc_rna 7SK 7SK RNA 9056124 protein-coding Camkmt calmodulin-lysine N-methyltransferase ENCODES a protein that exhibits calmodulin-lysine N-methyltransferase activity (ortholog); heat shock protein binding (ortholog); INVOLVED IN mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleolus (ortholog) NW_004955441 11453939 11830893 + 102003909 AGCD01037109;AGCD01037110;AGCD01037111;AGCD01037112;AGCD01037113;AGCD01037114;GBDF01156800;XM_005390947;XM_005390948;XM_005390949;XM_005390950 XP_005391004;XP_005391005;XP_005391006;XP_005391007 MODEL 8795468 protein-coding Ipo13 importin 13 ENCODES a protein that exhibits nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955537 3472866 3494552 + 102007936 AGCD01070959;GBCE01099023;XM_005410689;XM_013507752 XP_005410746;XP_013363206 MODEL 8755577 protein-coding Rab27a RAB27A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); blood coagulation (ortholog); complement-dependent cytotoxicity (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Chediak-Higashi syndrome (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); dendrite (ortholog); exocytic vesicle (ortholog) NW_004955409 588725 621874 + 102012406 AGCD01009156;AGCD01009157;AGCD01009158;GBCQ01179256;XM_005376611;XM_005376612;XM_005376613;XM_005376614 XP_005376668;XP_005376669;XP_005376670;XP_005376671 MODEL 39133501 snrna U4 U4 spliceosomal RNA 9037698 protein-coding Samd15 sterile alpha motif domain containing 15 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); pheochromocytoma/paraganglioma syndrome 1 (ortholog) NW_004955438 1273054 1283424 + 102014947 AGCD01034977;GBDF01081089;XM_005390196;XM_005390199;XM_013517155 XP_005390253;XP_005390256;XP_013372609 MODEL 39132051 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 8879932 pseudo LOC102022112 26S protease regulatory subunit 10B pseudogene NW_004955432 541788 542950 - 102022112 AGCD01030568 MODEL 9037805 pseudo LOC102018774 epidermal growth factor receptor substrate 15-like NW_004955550 90761 93344 - 102018774 AGCD01072481 MODEL 9045371 protein-coding Emc6 ER membrane protein complex subunit 6 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955467 13144659 13146434 - 102020231 AGCD01051667;GBBH01164107;XM_005399715 XP_005399772 MODEL 8730729 protein-coding Tango6 transport and golgi organization 6 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955484 7574194 7774802 - 102007899 AGCD01058339;AGCD01058340;AGCD01058341;AGCD01058342;AGCD01058343;AGCD01058344;AGCD01058345;AGCD01058346;GBCB01086514;XM_005403579;XM_013503936 XP_005403636;XP_013359390 MODEL 10373510 ncrna LOC106148581 uncharacterized LOC106148581 NW_004955424 23703266 23713941 - 106148581 AGCD01025017;AGCD01025018;GBDF01009385;XR_001234152 MODEL 10251910 protein-coding LOC106147493 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1756350 1772884 + 106147493 AGCD01074489;XM_013509314 XP_013364768 MODEL 8985142 protein-coding LOC102029900 histone acetyltransferase KAT6B NW_004955437 17042242 17106556 - 102029900 AGCD01034730;AGCD01034731;AGCD01034732;GBDJ01233497;XM_013516975 XP_013372429 MODEL 8704139 protein-coding LOC102024173 testis-specific serine/threonine-protein kinase 1-like NW_004955446 5256392 5257796 - 102024173 AGCD01040061;GBDK01384059;XM_005392640 XP_005392697 MODEL 8750609 protein-coding Eya2 EYA transcriptional coactivator and phosphatase 2 ENCODES a protein that exhibits histone H2AXY142 phosphatase activity (ortholog); magnesium ion binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway in absence of ligand (ortholog); mitochondrial outer membrane permeabilization (ortholog); striated muscle tissue development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955445 10368869 10520246 - 102015786 AGCD01039672;AGCD01039673;AGCD01039674;AGCD01039675;GBDI01137306;XM_013518289 XP_013373743 MODEL 8998011 pseudo LOC102011352 transcriptional coactivator YAP1-like NW_004955431 1758354 1764850 + 102011352 AGCD01029917 MODEL 8908528 protein-coding Ccl27 C-C motif chemokine ligand 27 ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); positive regulation of T cell chemotaxis (ortholog); regulation of actin cytoskeleton organization (ortholog); ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog) NW_004955472 1470407 1474800 + 102020106 AGCD01053394;AGCD01053395;GBDF01048978;XM_005401044 XP_005401101 MODEL 8741032 protein-coding Xrcc2 X-ray repair cross complementing 2 ENCODES a protein that exhibits four-way junction DNA binding (ortholog); INVOLVED IN centrosome cycle (ortholog); DNA damage response (ortholog); DNA repair (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH breast cancer (ortholog); breast carcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN centrosome (ortholog); Rad51B-Rad51C-Rad51D-XRCC2 complex (ortholog); replication fork (ortholog) NW_004955491 6579443 6629410 - 102013094 AGCD01060554;AGCD01060555;AGCD01060556;AGCD01060557;GBDF01185427;XM_005404847;XM_005404851;XM_013504663;XR_001231241;XR_001231242 XP_005404904;XP_005404908;XP_013360117 MODEL 9038488 protein-coding Bcl2l15 BCL2 like 15 FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955435 17151721 17158808 - 102015237 AGCD01033347;GBDJ01257385;XM_005388987 XP_005389044 MODEL 8700975 protein-coding LOC102005618 UPF0061 protein ETA_18310-like NW_004955429 2822671 2866918 + 102005618 AGCD01028439;AGCD01028440;AGCD01028441;AGCD01028442;AGCD01028443;GBBH01006669;GBCQ01067969;XM_005386894 XP_005386951 MODEL 8992688 protein-coding Tspan3 tetraspanin 3 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); lung cancer (ortholog) NW_004955450 1916067 1937364 - 102020506 AGCD01042371;GBCB01005521;XM_005393482 XP_005393539 MODEL 39134383 misc_rna 7SK 7SK RNA 8788837 protein-coding Armcx1 armadillo repeat containing X-linked 1 INVOLVED IN hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955503 7633088 7637415 + 102028107 AGCD01064796;GBBH01205439;XM_005406957;XM_005406958;XM_005406959;XM_005406960;XM_005406961;XM_005406962;XM_005406963;XM_005406964;XM_005406965 XP_005407014;XP_005407015;XP_005407016;XP_005407017;XP_005407018;XP_005407019;XP_005407020;XP_005407021;XP_005407022 MODEL 8923561 protein-coding Slc24a3 solute carrier family 24 member 3 ENCODES a protein that exhibits calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion transmembrane transport (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell periphery (ortholog); plasma membrane (ortholog) NW_004955415 27477801 27930108 + 102019800 AGCD01016632;AGCD01016633;AGCD01016634;AGCD01016635;AGCD01016636;GBCE01151533;GBDK01146008;XM_005380939 XP_005380996 MODEL 8846396 pseudo LOC102009388 liver carboxylesterase 2-like NW_004955484 9699400 9714908 - 102009388 AGCD01058425 MODEL 39132049 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 8724324 protein-coding Ptpn5 protein tyrosine phosphatase non-receptor type 5 ENCODES a protein that exhibits identical protein binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN exploration behavior (ortholog); negative regulation of MAP kinase activity (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Nerve Degeneration (ortholog); FOUND IN axon (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) NW_004955414 33381783 33436974 - 102025349 AGCD01015805;AGCD01015806;GBDF01076364;XM_005380426;XM_013512076 XP_005380483;XP_013367530 MODEL 9033362 protein-coding Rhbdl2 rhomboid like 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 16506830 16553594 - 102020301 AGCD01044514;GBDF01188796;XM_005395233;XM_005395235 XP_005395290;XP_005395292 MODEL 8721815 pseudo LOC102013028 protein-lysine N-methyltransferase N6AMT2 pseudogene NW_004955587 123785 124367 - 102013028 AGCD01076059 MODEL 8925462 protein-coding Polr2g RNA polymerase II subunit G INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II, core complex (ortholog) NW_004955599 469233 471761 - 102008278 AGCD01076651;GBDI01120679;XM_005414767 XP_005414824 MODEL 8732730 pseudo LOC102003479 tumor susceptibility gene 101 protein pseudogene NW_004955515 383004 383850 - 102003479 AGCD01067198;XR_264530 MODEL 8754735 protein-coding Egfl7 EGF like domain multiple 7 ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN blood vessel development (ortholog); negative regulation of cell migration (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955513 4145059 4154918 - 102004191 AGCD01066922;AGCD01066923;GBDI01006336;XM_005408482;XM_005408483;XM_013506698;XM_013506699;XM_013506700 XP_005408539;XP_005408540;XP_013362152;XP_013362153;XP_013362154 MODEL 8756219 ncrna LOC102010568 uncharacterized LOC102010568 NW_004955413 250256 256400 + 102010568 AGCD01013452;AGCD01013453;GBDF01303978;XR_260042 MODEL 8704975 protein-coding Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 INVOLVED IN axon extension (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN cell leading edge (ortholog); plasma membrane (ortholog) NW_004955457 11394572 11462617 + 102030500 AGCD01046968;AGCD01046969;AGCD01046970;GBDF01154438;XM_013520695;XM_013520696;XM_013520697;XM_013520698;XM_013520699;XM_013520700 XP_013376149;XP_013376150;XP_013376151;XP_013376152;XP_013376153;XP_013376154 MODEL 8863892 pseudo LOC102007875 AP-3 complex subunit sigma-1 pseudogene NW_004955412 13389131 13390789 - 102007875 AGCD01012835 MODEL 39132428 rrna 5S_rRNA 5S ribosomal RNA 8812040 protein-coding Lrrn3 leucine rich repeat neuronal 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN positive regulation of protein phosphorylation (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN clathrin adaptor complex (ortholog) NW_004955410 14954301 14986896 + 102013699 AGCD01010916;GBDI01298022;XM_005377312 XP_005377369 MODEL 8912692 protein-coding Ddhd1 DDHD domain containing 1 INVOLVED IN positive regulation of mitochondrial fission (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); colon adenocarcinoma (ortholog) NW_004955409 10111299 10185603 + 102007519 AGCD01009459;AGCD01009460;GBDF01047416;XM_005376772;XM_013510321 XP_005376829;XP_013365775 MODEL 39131730 rrna 5S_rRNA 5S ribosomal RNA 9046474 pseudo LOC102003842 protein CASC4 pseudogene NW_004955459 21261 22548 - 102003842 AGCD01047923 MODEL 39133502 snrna U4 U4 spliceosomal RNA 8850879 protein-coding Samd3 sterile alpha motif domain containing 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955436 11017336 11074020 - 102016743 AGCD01033804;AGCD01033805;AGCD01033806;AGCD01033807;GBDF01114641;XM_005389195 XP_005389252 MODEL 9038430 protein-coding Tktl2 transketolase like 2 FOUND IN cytoplasm (ortholog) NW_004955403 41526329 41528591 + 102015167 AGCD01002723;GBDK01218247;XM_013515256 XP_013370710 MODEL 8902395 protein-coding Cpa3 carboxypeptidase A3 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN angiotensin maturation (ortholog); regulation of angiotensin levels in blood (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955474 8602958 8626436 - 102015508 AGCD01054555;GBDF01073529;XM_005401423 XP_005401480 MODEL 8902238 protein-coding LOC102006347 syncytin-1-like NW_004955417 31573854 31588270 + 102006347 AGCD01018657;GBDF01112288;GBDK01015773;XM_005381976;XM_013512777 XP_005382033;XP_013368231 MODEL 8972400 protein-coding LOC102012646 uncharacterized LOC102012646 NW_004955416 14157382 14202260 + 102012646 AGCD01017243;AGCD01017244;AGCD01017245;AGCD01017246;GBCQ01192362;XM_013512420 XP_013367874 MODEL 8790883 protein-coding LOC102025994 olfactory receptor 10T2-like NW_004955468 10316621 10317565 - 102025994 AGCD01052075;XM_005400151 XP_005400208 MODEL 8876978 pseudo LOC102005285 poly [ADP-ribose] polymerase 8 pseudogene NW_004955430 8008251 8010551 - 102005285 AGCD01029378 MODEL 10240081 ncrna LOC106148582 uncharacterized LOC106148582 NW_004955424 423947 426615 + 106148582 AGCD01024176;GBDF01075675;XR_001234155;XR_001234156 MODEL 10296267 protein-coding LOC106147494 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1820363 1824975 + 106147494 AGCD01074491;GBDF01000431;XM_013509315 XP_013364769 MODEL 8699634 ncrna LOC102006723 uncharacterized LOC102006723 NW_004955576 651455 652726 - 102006723 AGCD01075304;GBDF01286939;XR_265073 MODEL 8990424 protein-coding LOC102025276 olfactory receptor 4C15-like NW_004955511 248515 251927 + 102025276 AGCD01066325;XM_013506350 XP_013361804 MODEL 8806570 ncrna LOC102011354 uncharacterized LOC102011354 NW_004955432 10743652 10745702 - 102011354 AGCD01030936;GBDF01250417;XR_261523 MODEL 8859926 protein-coding Ccl28 C-C motif chemokine ligand 28 ENCODES a protein that exhibits chemokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell chemotaxis (ortholog); negative regulation of leukocyte tethering or rolling (ortholog); ASSOCIATED WITH asthma (ortholog); bronchial disease (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) NW_004955446 18902465 18925178 + 102004434 AGCD01040418;GBBH01102278;XM_013518448 XP_013373902 MODEL 8932253 protein-coding Foxp2 forkhead box P2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN camera-type eye development (ortholog); caudate nucleus development (ortholog); cerebellar Purkinje cell differentiation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); apraxia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955432 20205369 20589608 + 102008021 AGCD01031200;AGCD01031201;AGCD01031202;AGCD01031203;AGCD01031204;AGCD01031205;AGCD01031206;GBCE01185244;XM_013516054;XM_013516055;XM_013516056;XM_013516057;XM_013516058 XP_013371508;XP_013371509;XP_013371510;XP_013371511;XP_013371512 MODEL 8736802 protein-coding Dym dymeclin ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN bone development (ortholog); Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955402 34150783 34541944 - 102011262 AGCD01000852;AGCD01000853;AGCD01000854;AGCD01000855;AGCD01000856;AGCD01000857;AGCD01000858;AGCD01000859;AGCD01000860;AGCD01000861;AGCD01000862;GBDK01133357;XM_005372905;XM_005372906 XP_005372962;XP_005372963 MODEL 8945916 protein-coding Rapsn receptor associated protein of the synapse ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); ionotropic glutamate receptor binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN establishment of protein localization to postsynaptic membrane (ortholog); neuromuscular junction development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH anxiety disorder (ortholog); autoimmune disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); neuromuscular junction (ortholog) NW_004955422 826556 834483 + 102021454 AGCD01022437;GBDI01027570;XM_005383970 XP_005384027 MODEL 8992802 protein-coding LOC102022115 uncharacterized LOC102022115 NW_004955524 3165835 3175594 - 102022115 AGCD01068862;AGCD01068863;GBDF01100035;XM_005409568;XM_013507310;XM_013507311;XM_013507312 XP_005409625;XP_013362764;XP_013362765;XP_013362766 MODEL 8828038 protein-coding LOC102009392 60S ribosomal protein L10-like NW_004955491 5944474 5944994 - 102009392 AGCD01060510;XM_005404834 XP_005404891 MODEL 8840265 protein-coding Emc7 ER membrane protein complex subunit 7 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955416 459668 482562 + 102022189 AGCD01016802;AGCD01016803;AGCD01016804;GBDF01007726;XM_005381163 XP_005381220 MODEL 8983567 ncrna LOC102029901 uncharacterized LOC102029901 NW_004955437 19332032 19334686 - 102029901 AGCD01034844;GBCB01122688;XR_001235009;XR_261896 MODEL 8829206 protein-coding Tank TRAF family member associated NFKB activator ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to ionizing radiation (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955449 12470203 12561364 - 102024402 AGCD01042115;AGCD01042116;AGCD01042117;AGCD01042118;GBCE01008309;XM_005393341;XM_005393343;XM_013518753;XM_013518754;XM_013518755;XM_013518757;XM_013518758;XM_013518759 XP_005393398;XP_005393400;XP_013374207;XP_013374208;XP_013374209;XP_013374211;XP_013374212;XP_013374213 MODEL 8928020 protein-coding CUNH10orf90 chromosome unknown C10orf90 homolog ENCODES a protein that exhibits histone deacetylase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955477 4299277 4510702 - 102012090 AGCD01055581;AGCD01055582;AGCD01055583;AGCD01055584;GBCQ01114390;XM_005402005;XM_013503016;XM_013503017;XM_013503018;XM_013503019 XP_005402062;XP_013358470;XP_013358471;XP_013358472;XP_013358473 MODEL 8828161 pseudo LOC102013029 cyclic AMP-dependent transcription factor ATF-4 pseudogene NW_004955402 34589714 34591735 + 102013029 AGCD01000866 MODEL 8736685 pseudo LOC102003482 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 pseudogene NW_004955535 3151906 3152089 + 102003482 AGCD01070687 MODEL 8760129 ncrna LOC102024176 uncharacterized LOC102024176 NW_004955448 1571760 1595646 + 102024176 AGCD01041261;AGCD01041262;GBDF01273897;XR_262454 MODEL 9039500 protein-coding Ppp1r16b protein phosphatase 1 regulatory subunit 16B ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN establishment of endothelial barrier (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955445 17864103 17961295 - 102008675 AGCD01039897;GBDI01295625;XM_005392527;XM_005392529 XP_005392584;XP_005392586 MODEL 39133823 misc_rna 7SK 7SK RNA 8811003 protein-coding Siral2 SIR2 antiphage like 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955413 29685697 29707860 + 102003643 AGCD01014592;GBDF01193282;GBDJ01075980;XM_013511625;XM_013511626 XP_013367079;XP_013367080 MODEL 8879791 protein-coding Camkv CaM kinase like vesicle associated ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of modification of postsynaptic structure (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955532 1747359 1762978 - 102020839 AGCD01070200;GBDF01238148;XM_005410227;XM_005410228;XM_005410229;XM_005410230;XM_013507615 XP_005410284;XP_005410285;XP_005410286;XP_005410287;XP_013363069 MODEL 8872680 protein-coding Eya3 EYA transcriptional coactivator and phosphatase 3 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AXY142 phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN double-strand break repair (ortholog); positive regulation of DNA repair (ortholog); response to ionizing radiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 7148762 7273886 - 102011833 AGCD01044137;AGCD01044138;AGCD01044139;AGCD01044140;AGCD01044141;AGCD01044142;GBDF01054198;XM_005394937;XM_005394938;XM_005394939;XM_005394940;XM_013519541;XM_013519542 XP_005394994;XP_005394995;XP_005394996;XP_005394997;XP_013374995;XP_013374996 MODEL 9037478 protein-coding Ipo4 importin 4 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); INVOLVED IN protein import into nucleus (ortholog); protein localization to nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955409 36214704 36223714 + 102007412 AGCD01010453;GBDI01123457;XM_005377029 XP_005377086 MODEL 10207234 protein-coding LOC106147495 natural cytotoxicity triggering receptor 1 NW_004955567 1855257 1856265 - 106147495 AGCD01074493;GBDJ01321609;XM_013509317 XP_013364771 MODEL 8730363 protein-coding Bcl3 BCL3 transcription coactivator ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Bcl3-Bcl10 complex (ortholog); Bcl3/NF-kappaB2 complex (ortholog); cytoplasm (ortholog) NW_004955555 1898280 1911466 + 102020960 AGCD01073114;AGCD01073115;GBBH01139881;GBDK01193635;XM_005412543 XP_005412600 MODEL 8934762 protein-coding Xrcc3 X-ray repair cross complementing 3 ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH basal cell carcinoma (ortholog); brain glioma (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear replication fork (ortholog) NW_004955538 2499297 2511898 - 102014168 AGCD01071127;AGCD01071128;GBDI01054433;XM_013507843;XM_013507844;XM_013507845;XM_013507846;XM_013507847;XM_013507848;XM_013507849;XM_013507850 XP_013363297;XP_013363298;XP_013363299;XP_013363300;XP_013363301;XP_013363302;XP_013363303;XP_013363304 MODEL 8857232 ncrna LOC102025278 uncharacterized LOC102025278 NW_004955513 3497931 3501438 - 102025278 AGCD01066906;GBDF01195803;XR_264468 MODEL 8933336 protein-coding LOC102018778 tubulin alpha-3 chain NW_004955442 19231448 19233877 - 102018778 AGCD01038042;AGCD01038043;GBBH01211441;XM_005391874 XP_005391931 MODEL 8858743 protein-coding Lrrn4 leucine rich repeat neuronal 4 INVOLVED IN long-term memory (ortholog); visual learning (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955415 16413666 16423605 - 102017449 AGCD01016379;AGCD01016380;GBDK01362649;XM_005380853;XM_005380854 XP_005380910;XP_005380911 MODEL 39131731 rrna 5S_rRNA 5S ribosomal RNA 39133374 snorna SNORD70 Small nucleolar RNA SNORD70 8729245 protein-coding Ddhd2 DDHD domain containing 2 ENCODES a protein that exhibits diacylglycerol lipase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN lipid droplet organization (ortholog); locomotory behavior (ortholog); positive regulation of mitochondrial fission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955463 13836401 13856430 + 102022059 AGCD01049891;AGCD01049892;GBDF01119212;GBDI01173737;XM_013521496 XP_013376950 MODEL 9049819 protein-coding Dglucy D-glutamate cyclase ENCODES a protein that exhibits D-glutamate cyclase activity (ortholog); INVOLVED IN glutamate metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955438 13440883 13554969 + 102015449 AGCD01035286;AGCD01035287;AGCD01035288;AGCD01035289;AGCD01035290;AGCD01035291;AGCD01035292;AGCD01081645;GBCQ01129162;XM_013517220;XM_013517221;XM_013517222 XP_013372674;XP_013372675;XP_013372676 MODEL 8757250 protein-coding Samd4a sterile alpha motif domain containing 4A ENCODES a protein that exhibits translation repressor activity (ortholog); INVOLVED IN positive regulation of translation (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955409 8716432 8916398 - 102029594 AGCD01009424;AGCD01009425;GBCB01020589;XM_005376760 XP_005376817 MODEL 8994995 protein-coding LOC102012648 galectin-9-like NW_004955481 5681486 5685579 - 102012648 AGCD01057000;XM_005402781 XP_005402838 MODEL 9017643 protein-coding Chst11 carbohydrate sulfotransferase 11 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); dermatan 4-sulfotransferase activity (ortholog); N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity (ortholog); INVOLVED IN cartilage development (ortholog); chondrocyte development (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955405 38985046 39134130 + 102012275 AGCD01005494;AGCD01005495;AGCD01005496;GBCE01072737;GBDI01161466;XM_005374594;XM_005374595 XP_005374651;XP_005374652 MODEL 8801590 protein-coding Rhbdl3 rhomboid like 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955481 7233305 7276085 + 102024907 AGCD01057058;GBBH01210574;GBCE01043483;XM_005402817 XP_005402874 MODEL 8950227 protein-coding Polr2h RNA polymerase II, I and III subunit H ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog); protein-DNA complex (ortholog); RNA polymerase I complex (ortholog) NW_004955420 23132053 23136954 - 102017989 AGCD01021228;GBCQ01122427;XM_005383311 XP_005383368 MODEL 8825686 pseudo LOC102010572 methionine adenosyltransferase 2 subunit beta pseudogene NW_004955467 10161772 10163152 + 102010572 AGCD01051547 MODEL 8868606 ncrna LOC102006725 uncharacterized LOC102006725 NW_004955449 6040808 6089424 - 102006725 AGCD01041947;AGCD01041948;GBDF01079246;XR_001235824 MODEL 8757276 ncrna LOC102005620 uncharacterized LOC102005620 NW_004955430 3876763 3953407 + 102005620 AGCD01029230;AGCD01029231;AGCD01029232;AGCD01029233;AGCD01029234;AGCD01029235;AGCD01029236;AGCD01029237;AGCD01029238;AGCD01029239;GBDF01177758;XR_001234564;XR_261415 MODEL 9015917 protein-coding Rab27b RAB27B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); multivesicular body sorting pathway (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Disease Progression (ortholog); FOUND IN apical plasma membrane (ortholog); Golgi apparatus (ortholog); Golgi stack (ortholog) NW_004955402 39357500 39415530 + 102026492 AGCD01000980;AGCD01000981;GBCE01129930;XM_005372952;XM_013510869 XP_005373009;XP_013366323 MODEL 8967277 protein-coding CUNH11orf24 chromosome unknown C11orf24 homolog ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955422 17563188 17573079 + 102005153 AGCD01022926;AGCD01022927;AGCD01022928;GBBH01102136;XM_005384279;XM_013514340 XP_005384336;XP_013369794 MODEL 8788406 protein-coding Tspan31 tetraspanin 31 ASSOCIATED WITH cholangiocarcinoma (ortholog); familial melanoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955458 5455012 5457912 + 102010452 AGCD01047493;GBDI01358535;XM_005397412 XP_005397469 MODEL 39134384 misc_rna 7SK 7SK RNA 8701549 pseudo LOC102003845 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955462 10272846 10275300 + 102003845 AGCD01049360 MODEL 39133503 snrna U4 U4 spliceosomal RNA 9018351 protein-coding Slc24a4 solute carrier family 24 member 4 ENCODES a protein that exhibits calcium, potassium:sodium antiporter activity (ortholog); calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); INVOLVED IN amelogenesis (ortholog); calcium ion export across plasma membrane (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta (ortholog); amelogenesis imperfecta hypomaturation type 2A5 (ortholog); FOUND IN apical plasma membrane (ortholog); cone photoreceptor outer segment (ortholog); cytoplasm (ortholog) NW_004955438 14609779 14765516 + 102026477 AGCD01035347;AGCD01035348;AGCD01035349;AGCD01035350;GBDI01034773;XM_005390329;XM_013517214 XP_005390386;XP_013372668 MODEL 8945042 protein-coding Armcx2 armadillo repeat containing X-linked 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955503 7756032 7760573 - 102004186 AGCD01064799;GBDK01059988;XM_005406973;XM_005406974;XM_005406975;XM_005406976;XM_013505846 XP_005407030;XP_005407031;XP_005407032;XP_005407033;XP_013361300 MODEL 8834519 protein-coding Foxp3 forkhead box P3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult T-cell leukemia/lymphoma (ortholog); Airway Remodeling (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955543 731707 742606 - 102011809 AGCD01071599;AGCD01071600;GBBH01200989;XM_013508158 XP_013363612 MODEL 8936900 pseudo LOC102006348 transcription factor 4 pseudogene NW_004955418 11676381 11678020 + 102006348 AGCD01019007 MODEL 8704307 protein-coding Ptpn6 protein tyrosine phosphatase non-receptor type 6 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cytokine receptor binding (ortholog); natural killer cell lectin-like receptor binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); CD27 signaling pathway (ortholog); cell differentiation (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH anogenital venereal wart (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); apical dendrite (ortholog); cell-cell junction (ortholog) NW_004955413 4525954 4547177 + 102009165 AGCD01013621;GBCQ01152113;XM_005378847;XM_005378848 XP_005378904;XP_005378905 MODEL 8990675 ncrna LOC102005286 uncharacterized LOC102005286 NW_004955512 4093717 4097420 - 102005286 AGCD01066728;GBCQ01087532;XR_001231725 MODEL 9046756 protein-coding Egfl8 EGF like domain multiple 8 INVOLVED IN in utero embryonic development (ortholog) NW_004955437 630099 633592 + 102013968 AGCD01034152;GBDI01325138;XM_005389429;XM_005389431;XM_005389432 XP_005389486;XP_005389488;XP_005389489 MODEL 8709250 ncrna LOC102009395 uncharacterized LOC102009395 NW_004955422 28736276 28739914 + 102009395 AGCD01023368;GBDF01220110;XR_260928 MODEL 39132430 rrna 5S_rRNA 5S ribosomal RNA 8767672 ncrna LOC102007879 uncharacterized LOC102007879 NW_004955413 30303353 30306413 - 102007879 AGCD01014605;GBDJ01200944;XR_260137 MODEL 8809654 protein-coding LOC102029905 olfactory receptor 10G2 NW_004955550 2330758 2331832 - 102029905 AGCD01072623;XM_005412152 XP_005412209 MODEL 8902898 pseudo LOC102013034 mitochondrial inner membrane protease ATP23 homolog NW_004955402 57646854 57653921 + 102013034 AGCD01001505 MODEL 39133824 misc_rna 7SK 7SK RNA 9037605 protein-coding LOC102011357 death-inducer obliterator 1-like NW_004955528 1209085 1240649 + 102011357 AGCD01069553;AGCD01069554;AGCD01069555;AGCD01069556;GBDF01089866;XM_013507433 XP_013362887 MODEL 39132436 rrna 5S_rRNA 5S ribosomal RNA 39133310 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 8929852 protein-coding Camlg calcium modulating ligand ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIz (ortholog); myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955408 29968962 29977896 + 102005674 AGCD01008791;GBDF01089234;XM_005376462 XP_005376519 MODEL 8880799 protein-coding Ptpn7 protein tyrosine phosphatase non-receptor type 7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955406 38233409 38249940 - 102022461 AGCD01006598;AGCD01006599;GBCE01150962;XM_005375204;XM_005375205;XM_005375206;XM_005375207;XM_013522339;XM_013522342;XM_013522343 XP_005375261;XP_005375262;XP_005375263;XP_005375264;XP_013377793;XP_013377796;XP_013377797 MODEL 8999207 protein-coding Dynap dynactin-associated protein NW_004955402 39169208 39173132 + 102026173 AGCD01000977;GBDI01343183;NM_001371758;XM_005372951 NP_001358687;XP_005373008 INFERRED 730469394 snorna SNORD70 Small nucleolar RNA SNORD70 8745595 protein-coding Cpa4 carboxypeptidase A4 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN hormone catabolic process (ortholog); peptide catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955479 10940269 10963629 + 102016592 AGCD01056570;GBDI01032686;XM_005402437 XP_005402494 MODEL 8907424 pseudo LOC102025997 vasculin-like protein 1 pseudogene NW_004955471 9096712 9098135 + 102025997 AGCD01053201 MODEL 8701178 protein-coding Lrrn4cl LRRN4 C-terminal like ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955599 514328 516684 + 102012387 AGCD01076654;GBDI01220215;XM_005414782 XP_005414839 MODEL 8716381 protein-coding Emc8 ER membrane protein complex subunit 8 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog); endoplasmic reticulum (ortholog) NW_004955541 873354 884247 - 102020052 AGCD01071363;GBDI01066673;GBDJ01075485;XM_005410981;XM_013507992 XP_005411038;XP_013363446 MODEL 8806603 pseudo LOC102012649 pre-mRNA-splicing factor SLU7 pseudogene NW_004955481 9058890 9071635 + 102012649 AGCD01057094 MODEL 10225542 ncrna LOC106148583 uncharacterized LOC106148583 NW_004955424 23815687 23822131 - 106148583 AGCD01025018;GBDF01263517;XR_001234157;XR_001234158 MODEL 8857548 pseudo LOC102009396 kinesin-associated protein 3 pseudogene NW_004955422 9676287 9678648 + 102009396 AGCD01022717 MODEL 8924289 protein-coding Ppp1r17 protein phosphatase 1 regulatory subunit 17 ENCODES a protein that exhibits phosphatase inhibitor activity (ortholog); protein phosphatase inhibitor activity (ortholog); protein serine/threonine phosphatase inhibitor activity (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); Hypercholesterolemia (ortholog) NW_004955410 32720954 32737676 + 102027052 AGCD01011349;XM_005377523;XM_005377524 XP_005377580;XP_005377581 MODEL 8766000 protein-coding Ccl5 C-C motif chemokine ligand 5 ENCODES a protein that exhibits CCR1 chemokine receptor binding (ortholog); CCR5 chemokine receptor binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell-cell signaling (ortholog); cellular response to alkyl hydroperoxide (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955481 10293758 10301118 - 102022390 AGCD01057139;GBDK01092156;XM_005402897 XP_005402954 MODEL 8947921 protein-coding Eya4 EYA transcriptional coactivator and phosphatase 4 ENCODES a protein that exhibits transcription factor binding (ortholog); INVOLVED IN inner ear development (ortholog); middle ear morphogenesis (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness 10 (ortholog); Breast Cancer, Familial (ortholog) NW_004955436 13710366 13982379 + 102026467 AGCD01033862;AGCD01033863;AGCD01033864;AGCD01033865;AGCD01033866;AGCD01033867;GBDI01088097;XM_013516661;XM_013516663;XM_013516664;XM_013516665;XM_013516666;XM_013516667;XM_013516668;XM_013516669 XP_013372115;XP_013372117;XP_013372118;XP_013372119;XP_013372120;XP_013372121;XP_013372122;XP_013372123 MODEL 8905163 protein-coding Ipo5 importin 5 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); NLS-bearing protein import into nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955404 12416755 12480281 - 102018053 AGCD01003461;AGCD01003462;AGCD01003463;GBCB01002187;GBDF01004438;XM_005374083;XM_013516134 XP_005374140;XP_013371588 MODEL 9011629 protein-coding LOC102005621 olfactory receptor 5B3-like NW_004955511 3197583 3200113 - 102005621 AGCD01066448;XM_013506384 XP_013361838 MODEL 8803341 protein-coding LOC102029909 zinc finger protein 665-like NW_004955558 38306 57028 + 102029909 AGCD01073339;GBDJ01243110;XM_013508857;XM_013508858;XM_013508859;XM_013508860;XM_013508861;XM_013508862 XP_013364311;XP_013364312;XP_013364313;XP_013364314;XP_013364315;XP_013364316 MODEL 9049138 protein-coding Xrcc4 X-ray repair cross complementing 4 ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); DNA binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to lithium ion (ortholog); central nervous system development (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); condensed chromosome (ortholog) NW_004955418 27174510 27426245 - 102010162 AGCD01019404;AGCD01019405;AGCD01019406;AGCD01019407;AGCD01019408;GBCE01069514;XM_005382305;XM_005382306 XP_005382362;XP_005382363 MODEL 8726944 protein-coding Rab28 RAB28, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN photoreceptor cell maintenance (ortholog); visual perception (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cone dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) NW_004955480 10220811 10374021 + 102021555 AGCD01056760;AGCD01056761;AGCD01056762;AGCD01056763;AGCD01056764;AGCD01056765;AGCD01056766;GBCE01031034;XM_005402540;XM_005402541;XM_013503323;XM_013503324;XM_013503325;XM_013503326;XR_001230910 XP_005402597;XP_005402598;XP_013358777;XP_013358778;XP_013358779;XP_013358780 MODEL 8893359 pseudo LOC102025284 NAD-dependent malic enzyme, mitochondrial pseudogene NW_004955525 4345346 4349829 + 102025284 AGCD01069189 MODEL 39131732 rrna 5S_rRNA 5S ribosomal RNA 8915565 protein-coding CUNH11orf42 chromosome unknown C11orf42 homolog ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955414 21946935 21954111 + 102016695 AGCD01015438;GBDF01047803;XM_005380122;XM_005380123 XP_005380179;XP_005380180 MODEL 8970391 protein-coding Ddi1 DDI proteasomal shuttling factor 1 INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); regulation of DNA stability (ortholog) NW_004955412 6980778 6982453 + 102020780 AGCD01012685;GBDF01003996;XM_013511229 XP_013366683 MODEL 8726571 pseudo LOC102003484 RNA-binding protein 25 pseudogene NW_004955437 14612893 14618799 - 102003484 AGCD01034678 MODEL 8720833 protein-coding Armcx3 armadillo repeat containing X-linked 3 INVOLVED IN axonal transport of mitochondrion (ortholog); intracellular protein localization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955503 7705821 7709169 + 102003468 AGCD01064799;GBCE01005020;XM_005406971;XM_005406972 XP_005407028;XP_005407029 MODEL 8719963 protein-coding Slc24a5 solute carrier family 24 member 5 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion import (ortholog); monoatomic ion transmembrane transport (ortholog); negative regulation of melanin biosynthetic process (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Albinism (ortholog); genetic disease (ortholog); ocular albinism 1 (ortholog); FOUND IN melanosome (ortholog); trans-Golgi network (ortholog) NW_004955409 5747624 5768122 - 102013803 AGCD01009322;AGCD01009323;GBDI01093137;XM_005376708 XP_005376765 MODEL 8879934 protein-coding Samd4b sterile alpha motif domain containing 4B ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN cerebellar neuron development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955468 172331 199230 - 102023572 AGCD01051684;GBDJ01084508;XM_005399777;XM_005399779;XM_013522377;XM_013522378 XP_005399834;XP_005399836;XP_013377831;XP_013377832 MODEL 8911149 protein-coding LOC102006353 sodium- and chloride-dependent transporter XTRP3A NW_004955420 26159281 26191883 + 102006353 AGCD01021392;GBCE01175467;XM_005383468 XP_005383525 MODEL 8833168 protein-coding Chst12 carbohydrate sulfotransferase 12 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hypertension (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955460 12847440 12875614 - 102015084 AGCD01048664;GBDJ01197236;XM_005397875;XM_005397876;XM_013521288 XP_005397932;XP_005397933;XP_013376742 MODEL 8997720 protein-coding Rhbg Rh family B glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); transepithelial ammonium transport (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955545 2491417 2504013 + 102027116 AGCD01071906;AGCD01071907;GBCQ01000909;XM_005411675;XM_005411676;XM_013508364;XR_001232203 XP_005411732;XP_005411733;XP_013363818 MODEL 8962666 ncrna LOC102010573 uncharacterized LOC102010573 NW_004955468 2472919 2491755 + 102010573 AGCD01051821;AGCD01051822;AGCD01051823;GBDF01158088;XR_263379 MODEL 8791806 protein-coding Polr2i RNA polymerase II subunit I INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II, core complex (ortholog) NW_004955468 2494120 2495578 + 102009928 AGCD01051823;GBDI01059799;XM_005399922 XP_005399979 MODEL 8823193 protein-coding LOC102006726 saoe class I histocompatibility antigen, C alpha chain-like NW_004955583 1134089 1136685 - 102006726 AGCD01075893;GBCC01000509;GBDK01001536;XM_013509825 XP_013365279 MODEL 8729759 protein-coding LOC102018782 zinc finger protein 709-like NW_004955569 1517762 1537562 + 102018782 AGCD01074661;AGCD01074662;AGCD01074663;AGCD01074664;GBDF01080575;XM_013509365 XP_013364819 MODEL 8807761 protein-coding LOC102022116 trace amine-associated receptor 7b-like NW_004955436 13096534 13097565 - 102022116 AGCD01033854;XM_005389211 XP_005389268 MODEL 8895955 protein-coding Tlcd1 TLC domain containing 1 INVOLVED IN membrane assembly (ortholog); phospholipid homeostasis (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955481 4429923 4433147 + 102022289 AGCD01056937;AGCD01056938;GBBH01123169;GBCQ01100660;XM_005402717 XP_005402774 MODEL 39133825 misc_rna 7SK 7SK RNA 9007799 protein-coding Rara retinoic acid receptor alpha ENCODES a protein that exhibits alpha-actinin binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); bone development (ortholog); cellular response to estrogen stimulus (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 14876663 14917134 + 102012391 AGCD01043579;AGCD01043580;AGCD01043581;AGCD01043582;GBDF01083494;GBDK01083214;XM_005394357;XM_013519320;XM_013519321;XM_013519322 XP_005394414;XP_013374774;XP_013374775;XP_013374776 MODEL 39134385 misc_rna 7SK 7SK RNA 9056748 protein-coding Bcl6 BCL6 transcription repressor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); B cell differentiation (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); diffuse large B-cell lymphoma (ortholog); Gastrointestinal Hemorrhage (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); paraspeckles (ortholog) NW_004955420 19998960 20021200 + 102023603 AGCD01021070;GBCQ01038861;XM_005383244;XM_005383245;XM_005383246;XM_005383247;XM_005383248;XM_013513551 XP_005383301;XP_005383302;XP_005383303;XP_005383304;XP_005383305;XP_013369005 MODEL 8758599 ncrna LOC102024177 uncharacterized LOC102024177 NW_004955448 8662974 8691442 - 102024177 AGCD01041450;GBDF01020951;XR_262465 MODEL 9000781 protein-coding Taok1 TAO kinase 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); kinase activity (ortholog); INVOLVED IN central nervous system neuron development (ortholog); DNA damage response (ortholog); execution phase of apoptosis (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytosol (ortholog); microtubule cytoskeleton (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955481 3698686 3836209 - 102008414 AGCD01056913;AGCD01056914;AGCD01056915;AGCD01056916;AGCD01056917;GBBH01160616;GBDK01127204;XM_013503358 XP_013358812 MODEL 8938589 pseudo LOC102029914 protein RRP5 homolog NW_004955572 1004079 1005702 + 102029914 AGCD01074934 MODEL 8906913 ncrna LOC102005289 uncharacterized LOC102005289 NW_004955514 2421476 2423697 + 102005289 AGCD01067079;GBDF01075509;XR_264495 MODEL 8718318 protein-coding Dynap dynactin associated protein INVOLVED IN cellular response to ergosterol (ortholog); positive regulation of cell population proliferation (ortholog); regulation of apoptotic process (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955402 39097723 39142938 + 102004539 AGCD01000976;AGCD01000977;XM_013510770 XP_013366224 MODEL 10267286 pseudo LOC106147496 serine/threonine-protein kinase 3 pseudogene NW_004955408 24746083 24747709 + 106147496 AGCD01008625 MODEL 8791133 protein-coding Lrrtm1 leucine rich repeat transmembrane neuronal 1 INVOLVED IN exploration behavior (ortholog); locomotory behavior (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955424 6322284 6337550 + 102011783 AGCD01024421;AGCD01024422;GBBH01128637;XM_013514747 XP_013370201 MODEL 8820253 protein-coding LOC102007886 putative olfactory receptor 52P1 NW_004955414 21670016 21670951 - 102007886 AGCD01015426;XM_005380499 XP_005380556 MODEL 8849067 pseudo LOC102013036 olfactory receptor 2L3-like NW_004955619 80032 80977 + 102013036 AGCD01077334 MODEL 10274419 ncrna LOC106148584 uncharacterized LOC106148584 NW_004955424 8037484 8168035 + 106148584 AGCD01024452;AGCD01024453;AGCD01024454;AGCD01024455;AGCD01024456;XR_001234159 MODEL 10277301 protein-coding Chst13 carbohydrate sulfotransferase 13 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog) NW_004955421 21770083 21787563 + 106148435 AGCD01022117;AGCD01022118;AGCD01022119;GBCE01150800;XM_013513809 XP_013369263 MODEL 8893738 protein-coding Tspan32 tetraspanin 32 INVOLVED IN blood coagulation (ortholog); cytoskeleton organization (ortholog); defense response to protozoan (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell surface (ortholog); integrin alphaIIb-beta3 complex (ortholog) NW_004955422 14101833 14121784 + 102008544 AGCD01022852;GBDK01393243;XM_005384201;XM_005384202 XP_005384258;XP_005384259 MODEL 8814966 protein-coding Rhce Rh blood group CcEe antigens INVOLVED IN ammonium transmembrane transport (ortholog); erythrocyte development (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); congenital hemolytic anemia (ortholog); hepatocellular carcinoma (ortholog); FOUND IN ankyrin-1 complex (ortholog); membrane (ortholog) NW_004955452 4912882 4956174 - 102007179 AGCD01044001;AGCD01044002;AGCD01044003;GBDF01248710;XM_005394822;XM_013519668 XP_005394879;XP_013375122 MODEL 39133309 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 8926813 protein-coding Camp cathelicidin antimicrobial peptide INVOLVED IN amyloid fibril formation (ortholog); antibacterial innate immune response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); dentin caries (ortholog); FOUND IN cell projection (ortholog); extracellular region (ortholog); specific granule (ortholog) NW_004955420 24911920 24914698 + 102014676 AGCD01021338;GBBH01002601;XM_005383402 XP_005383459 MODEL 8976389 protein-coding Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); facultative heterochromatin formation (ortholog); hepatocyte homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cow milk allergy (ortholog); FOUND IN chromosome, telomeric region (ortholog); ESC/E(Z) complex (ortholog); heterochromatin (ortholog) NW_004955451 16548898 16563449 - 102022246 AGCD01043690;GBCB01043891;XM_013519144 XP_013374598 MODEL 8894547 protein-coding Dguok deoxyguanosine kinase ENCODES a protein that exhibits deoxyadenosine kinase activity (ortholog); deoxyguanosine kinase activity (ortholog); deoxynucleoside kinase activity (ortholog); INVOLVED IN dAMP salvage (ortholog); dGTP metabolic process (ortholog); mitochondrial ATP synthesis coupled electron transport (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ortholog); Breast Cancer, Familial (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955424 11739904 11773884 - 102007350 AGCD01024573;AGCD01024574;GBDI01313341;XM_005385533;XM_005385534 XP_005385590;XP_005385591 MODEL 8992308 ncrna LOC102005624 uncharacterized LOC102005624 NW_004955518 1052939 1058556 - 102005624 AGCD01067755;GBDF01055606;XR_001231850;XR_264561;XR_264562 MODEL 8773485 protein-coding Foxp4 forkhead box P4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN embryonic foregut morphogenesis (ortholog); heart development (ortholog); lung secretory cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); congestive heart failure (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 8029346 8056243 + 102013003 AGCD01034477;GBDF01125145;XM_013516993 XP_013372447 MODEL 10316170 protein-coding LOC106148585 translation initiation factor IF-2-like NW_004955424 22434487 22434851 - 106148585 AGCD01024968;GBBH01069420;GBDK01094834;XM_013514608 XP_013370062 MODEL 39133376 snorna SNORD70 Small nucleolar RNA SNORD70 8907164 protein-coding Cpa5 carboxypeptidase A5 ENCODES a protein that exhibits peptidase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog) NW_004955479 10981724 11002572 + 102017125 AGCD01056570;GBDF01045820;XM_005402439;XM_005402440;XM_005402441;XM_005402442 XP_005402496;XP_005402497;XP_005402498;XP_005402499 MODEL 8994315 protein-coding Egflam EGF like, fibronectin type III and laminin G domains ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); synapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); extracellular matrix (ortholog) NW_004955426 22856515 23030517 + 102018622 AGCD01026627;AGCD01026628;AGCD01026629;AGCD01026630;AGCD01026631;AGCD01026632;GBDF01182451;XM_005386224 XP_005386281 MODEL 8767685 protein-coding Sirpa signal regulatory protein alpha ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); GTPase regulator activity (ortholog); protein antigen binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell migration (ortholog); cell motility (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955415 13030752 13072735 + 102011533 AGCD01016239;AGCD01016240;AGCD01016241;AGCD01016242;GBBH01061866;XM_005380740;XM_005380741;XM_005380742;XM_013512244;XM_013512245 XP_005380797;XP_005380798;XP_005380799;XP_013367698;XP_013367699 MODEL 8739858 protein-coding LOC102003491 U3 small nucleolar RNA-associated protein 14 homolog A-like NW_004955546 975313 987398 + 102003491 AGCD01072034;GBBH01046731;XM_005411756 XP_005411813 MODEL 8943657 protein-coding Ddi2 DDI proteasomal shuttling factor 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); protein processing (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955527 2498211 2534768 - 102010728 AGCD01069439;AGCD01069440;AGCD01069441;AGCD01069442;AGCD01069443;AGCD01069444;GBCE01085284;GBDJ01084867;XM_005409866 XP_005409923 MODEL 9015689 ncrna LOC102011358 uncharacterized LOC102011358 NW_004955436 18358012 18378034 - 102011358 AGCD01033960;GBDF01225067;XR_001234940 MODEL 8948111 protein-coding Slc25a1 solute carrier family 25 member 1 ENCODES a protein that exhibits citrate secondary active transmembrane transporter activity (ortholog); citrate:succinate antiporter activity (ortholog); tricarboxylic acid transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial citrate transmembrane transport (ortholog); negative regulation of ferroptosis (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); Agenesis of Corpus Callosum (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955442 18804319 18807353 + 102011484 AGCD01038020;GBCE01076067;GBDJ01089948;XM_005391786 XP_005391843 MODEL 8837990 protein-coding LOC102005291 transcription initiation factor TFIID subunit 4-like NW_004955432 22101100 22117718 + 102005291 AGCD01031246;AGCD01031247;XM_013515921 XP_013371375 MODEL 10237270 pseudo LOC106147497 RNA-binding motif, single-stranded-interacting protein 1 pseudogene NW_004955568 1191751 1194361 + 106147497 AGCD01074543 MODEL 8811238 pseudo LOC102010574 sodium channel modifier 1 pseudogene NW_004955413 9333530 9334670 - 102010574 AGCD01013903 MODEL 39132437 rrna 5S_rRNA 5S ribosomal RNA 9026698 protein-coding Ipo7 importin 7 ENCODES a protein that exhibits histone binding (ortholog); SMAD binding (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of odontoblast differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955414 25131703 25195892 + 102028737 AGCD01015576;AGCD01015577;AGCD01015578;AGCD01015579;AGCD01015580;AGCD01015581;GBCE01098244;XM_005380260;XM_013511836 XP_005380317;XP_013367290 MODEL 8757143 pseudo LOC102026003 TIMELESS-interacting protein-like NW_004955416 8733181 8735686 + 102026003 AGCD01017065 MODEL 9036102 protein-coding Rab29 RAB29, member RAS oncogene family ENCODES a protein that exhibits dynein complex binding (ortholog); G protein activity (ortholog); GDP binding (ortholog); INVOLVED IN cellular detoxification (ortholog); cilium assembly (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 41452733 41468467 - 102012400 AGCD01006684;GBDI01312292;XM_005375371;XM_005375372;XM_005375373;XM_013522973;XM_013522978;XM_013522980;XM_013522983;XM_013522990 XP_005375428;XP_005375429;XP_005375430;XP_013378427;XP_013378432;XP_013378434;XP_013378437;XP_013378444 MODEL 8956875 protein-coding CUNH11orf52 chromosome unknown C11orf52 homolog ASSOCIATED WITH Carney-Stratakis syndrome (ortholog); FOUND IN cell junction (ortholog) NW_004955412 13635088 13640604 + 102023886 AGCD01012843;GBCB01120660;XM_005378097;XM_005378098 XP_005378154;XP_005378155 MODEL 8800654 ncrna LOC102012650 uncharacterized LOC102012650 NW_004955418 28431582 28460778 - 102012650 AGCD01019438;AGCD01019439;GBDI01285082;XR_001233482;XR_260593 MODEL 8968791 protein-coding Emc9 ER membrane protein complex subunit 9 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog) NW_004955409 36257904 36262120 + 102009357 AGCD01010454;GBDK01277777;XM_005377037 XP_005377094 MODEL 8797070 protein-coding Samd5 sterile alpha motif domain containing 5 ASSOCIATED WITH Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955867 2559 3237 - 102020516 AGCD01078524;GBCQ01114304;GBDK01194475;XM_005415139 XP_005415196 MODEL 8706351 ncrna LOC102005629 uncharacterized LOC102005629 NW_004955526 3115354 3136784 + 102005629 AGCD01069328;XR_264659 MODEL 8838051 ncrna LOC102009397 uncharacterized LOC102009397 NW_004955423 12414062 12469348 + 102009397 AGCD01023718;GBDK01419002;XR_260967 MODEL 39133340 snrna U4 U4 spliceosomal RNA 8720593 protein-coding Ppp1r18 protein phosphatase 1 regulatory subunit 18 ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); Familial Prostate Cancer (ortholog) NW_004955583 673634 681439 - 102018043 AGCD01075848;AGCD01075849;AGCD01075850;GBDI01067824;GBDK01075378;XM_005414315 XP_005414372 MODEL 8870766 protein-coding Dync1h1 dynein cytoplasmic 1 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); identical protein binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to nerve growth factor stimulus (ortholog); cytoplasmic stress granule assembly (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955538 1388595 1458166 + 102025509 AGCD01071057;AGCD01071058;AGCD01071059;AGCD01071060;AGCD01071061;AGCD01071062;AGCD01071063;GBBH01031319;GBCB01112090;XM_013507827;XM_013507828 XP_013363281;XP_013363282 MODEL 8712078 protein-coding Ccm2 CCM2 scaffold protein INVOLVED IN blood vessel development (ortholog); blood vessel endothelial cell differentiation (ortholog); cell-cell junction organization (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cavernous hemangioma (ortholog); Central Nervous System Vascular Malformations (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955456 7232224 7251012 - 102015078 AGCD01046401;GBDJ01137048;GBDJ01137052;XM_013520603 XP_013376057 MODEL 8800821 protein-coding LOC102018784 arylacetamide deacetylase-like NW_004955448 2910775 2917084 - 102018784 AGCD01041293;GBDJ01157315;XM_013518615 XP_013374069 MODEL 8936027 protein-coding Lrrtm2 leucine rich repeat transmembrane neuronal 2 ENCODES a protein that exhibits neurexin family protein binding (ortholog); INVOLVED IN long-term synaptic potentiation (ortholog); negative regulation of receptor internalization (ortholog); regulation of postsynaptic density assembly (ortholog); FOUND IN excitatory synapse (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955418 1636906 1643430 + 102023471 AGCD01018724;XM_005382088 XP_005382145 MODEL 8771718 ncrna LOC102005636 uncharacterized LOC102005636 NW_004955542 148238 153369 + 102005636 AGCD01071458;AGCD01071459;GBDF01025206;XR_264850 MODEL 9040632 pseudo LOC102022120 THAP domain-containing protein 5-like NW_004955536 1401488 1402761 + 102022120 AGCD01070756 MODEL 8986635 protein-coding Ptpn9 protein tyrosine phosphatase non-receptor type 9 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); positive regulation of protein localization to plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); neuron projection terminus (ortholog) NW_004955450 2725755 2796390 + 102027249 AGCD01042400;AGCD01042401;AGCD01042402;AGCD01042403;AGCD01042404;AGCD01042405;AGCD01042406;AGCD01042407;GBCB01073974;GBDF01189354;XM_005393506 XP_005393563 MODEL 8886577 protein-coding Tlcd2 TLC domain containing 2 INVOLVED IN membrane assembly (ortholog); phospholipid homeostasis (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955481 1475748 1478447 + 102017659 AGCD01056833;GBDI01280068;XM_005402611 XP_005402668 MODEL 39131733 rrna 5S_rRNA 5S ribosomal RNA 8725810 protein-coding LOC102025288 A-kinase anchor protein 5-like NW_004955543 2222873 2226189 + 102025288 AGCD01071648;AGCD01071649;XM_013508141 XP_013363595 MODEL 8722318 protein-coding Slc25a10 solute carrier family 25 member 10 ENCODES a protein that exhibits dicarboxylic acid transmembrane transporter activity (ortholog); malate transmembrane transporter activity (ortholog); phosphate transmembrane transporter activity (ortholog); INVOLVED IN glyceraldehyde-3-phosphate biosynthetic process (ortholog); malate transport (ortholog); phosphate ion transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955506 1389798 1396670 - 102028111 AGCD01065262;GBCQ01002900;XM_005407261 XP_005407318 MODEL 8729907 protein-coding Xrcc5 X-ray repair cross complementing 5 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN activation of innate immune response (ortholog); cell population proliferation (ortholog); cellular hyperosmotic salinity response (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); basal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955453 16967453 17054634 - 102024526 AGCD01044916;AGCD01044917;GBCB01075567;XM_005395688;XM_005395689 XP_005395745;XP_005395746 MODEL 39131386 protein-coding CHST13 carbohydrate sulfotransferase 13 39133307 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 9021314 protein-coding Rarb retinoic acid receptor beta ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); heterocyclic compound binding (ortholog); nuclear receptor activity (ortholog); INVOLVED IN bone development (ortholog); embryonic digestive tract development (ortholog); embryonic eye morphogenesis (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Anophthalmia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 17067536 17457558 + 102013109 AGCD01029649;AGCD01029650;AGCD01029651;AGCD01029652;AGCD01029653;AGCD01029654;AGCD01029655;AGCD01029656;AGCD01029657;GBDF01287994;XM_005387488 XP_005387545 MODEL 8781150 ncrna LOC102029918 uncharacterized LOC102029918 NW_004955402 11086744 11120121 - 102029918 AGCD01000295;GBDF01042949;XR_259050 MODEL 8931319 protein-coding Rhcg Rh family C glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium excretion (ortholog); ammonium transmembrane transport (ortholog); intracellular monoatomic ion homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Hypoaldosteronism (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955416 15639425 15657708 + 102028747 AGCD01017336;AGCD01017337;AGCD01017338;GBDI01026790;XM_005381554 XP_005381611 MODEL 9010311 protein-coding Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); cell development (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); FOUND IN chromatin (ortholog); chromatin silencing complex (ortholog); chromosome (ortholog) NW_004955491 4215353 4292229 - 102008543 AGCD01060420;AGCD01060421;AGCD01060422;AGCD01060423;GBDJ01080738;XM_005404737;XM_013504606;XM_013504607;XM_013504608;XM_013504609;XM_013504610 XP_005404794;XP_013360060;XP_013360061;XP_013360062;XP_013360063;XP_013360064 MODEL 8823831 protein-coding Bcl6b BCL6B transcription repressor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955467 9900392 9906610 - 102006326 AGCD01051535;GBDJ01140936;XM_005399571;XM_013522100 XP_005399628;XP_013377554 MODEL 8705570 protein-coding Armcx4 armadillo repeat containing X-linked 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955503 7603395 7613711 + 102027763 AGCD01064796;GBDK01060405;XM_013505860 XP_013361314 MODEL 8856723 protein-coding LOC102006354 small ubiquitin-related modifier 2-like NW_004955491 597140 597413 + 102006354 AGCD01060341;XM_005404728;XM_005404729 XP_005404785;XP_005404786 MODEL 8716984 protein-coding Dhcr24 24-dehydrocholesterol reductase ENCODES a protein that exhibits Delta24(24-1) sterol reductase activity (ortholog); Delta24-sterol reductase activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cholesterol biosynthetic process (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955464 4533928 4557893 + 102024198 AGCD01049992;GBCE01031278;XM_005398508 XP_005398565 MODEL 8913061 protein-coding Taok2 TAO kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase kinase activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axonogenesis (ortholog); basal dendrite arborization (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axonal growth cone (ortholog) NW_004955493 6968537 6986608 - 102028765 AGCD01061153;GBDJ01228215;XM_005405211;XM_005405212;XM_005405214;XM_005405215;XM_005405216;XR_264090 XP_005405268;XP_005405269;XP_005405271;XP_005405272;XP_005405273 MODEL 10348906 protein-coding Foxq1 forkhead box Q1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN hair follicle morphogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog) NW_004955465 11802947 11803381 - 106150115 AGCD01050535;GBDJ01224995;XM_013521800 XP_013377254 MODEL 8886486 protein-coding Polr2j RNA polymerase II subunit J ENCODES a protein that exhibits LRR domain binding (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian cancer (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II, core complex (ortholog) NW_004955456 15146713 15151320 + 102014745 AGCD01046662;GBDI01007145;XM_005396834 XP_005396891 MODEL 8966506 protein-coding Cpa6 carboxypeptidase A6 ASSOCIATED WITH cervical cancer (ortholog); epilepsy (ortholog); familial febrile seizures 11 (ortholog) NW_004955444 11624842 11922293 + 102008037 AGCD01039047;AGCD01039048;AGCD01039049;AGCD01039050;AGCD01039051;AGCD01039052;AGCD01039053;AGCD01039054;AGCD01039055;AGCD01039056;AGCD01039057;GBDJ01401155;XM_005392121 XP_005392178 MODEL 8782591 protein-coding LOC102003846 aldose reductase NW_004955410 33554985 33569352 + 102003846 AGCD01011372;AGCD01011373;GBCQ01005098;XM_005377536 XP_005377593 MODEL 8726769 protein-coding LOC102013037 solute carrier organic anion transporter family member 5A1-like NW_004955655 54988 70910 - 102013037 AGCD01077842;GBCB01004342;GBDF01097203;XM_013510175 XP_013365629 MODEL 10353899 ncrna LOC106147498 uncharacterized LOC106147498 NW_004955568 121850 122561 + 106147498 AGCD01074503;GBCE01011332;XR_001232424 MODEL 8997933 protein-coding LOC102007889 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like NW_004955476 1983725 1985174 + 102007889 AGCD01055217;GBDF01044591;XM_005401726 XP_005401783 MODEL 8875498 pseudo LOC102010575 60S ribosomal protein L19 pseudogene NW_004955414 19517744 19518919 - 102010575 AGCD01015321 MODEL 150537106 snorna SNORD71 Small nucleolar RNA SNORD71 8708121 pseudo LOC102025302 zinc finger protein 791 pseudogene NW_004955448 14214649 14216042 - 102025302 AGCD01041628 MODEL 8791690 protein-coding CUNH11orf65 chromosome unknown C11orf65 homolog INVOLVED IN negative regulation of mitochondrial fission (ortholog); negative regulation of protein localization to mitochondrion (ortholog); ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955412 10533174 10567364 - 102006324 AGCD01012769;AGCD01012770;AGCD01012771;GBDI01370053;XM_005378039 XP_005378096 MODEL 10080244 protein-coding LOC106148586 uncharacterized LOC106148586 NW_004955403 54056448 54059550 + 106148586 AGCD01003085;AGCD01003086;GBCE01184673;GBDK01226537;XM_013514617 XP_013370071 MODEL 8795990 protein-coding Egfr epidermal growth factor receptor ENCODES a protein that exhibits actin filament binding (ortholog); calmodulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cell morphogenesis (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; cetuximab pharmacodynamics pathway; E-cadherin signaling pathway; ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) NW_004955456 321222 456431 - 102003837 AGCD01046203;AGCD01046204;GBDJ01088996;XM_005396877 XP_005396934 MODEL 8938401 protein-coding Emcn endomucin ENCODES a protein that exhibits carbohydrate binding (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955496 7413228 7498983 + 102020583 AGCD01062379;GBCQ01007628;XM_005406259;XM_005406260 XP_005406316;XP_005406317 MODEL 8814108 protein-coding Ddias DNA damage induced apoptosis suppressor INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to gamma radiation (ortholog); cellular response to hydroperoxide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955414 9607338 9636941 - 102030296 AGCD01015029;AGCD01015030;AGCD01015031;GBDF01015330;XM_013512024 XP_013367478 MODEL 8844786 pseudo LOC102009401 CGG triplet repeat-binding protein 1-like NW_004955503 3186612 3188685 + 102009401 AGCD01064619 MODEL 8887067 protein-coding LOC102011365 immunoglobulin iota chain NW_004955442 17173705 17174412 - 102011365 AGCD01037944;GBBH01018271;XM_005391688 XP_005391745 MODEL 8827915 pseudo LOC102005294 stromal membrane-associated protein 1 pseudogene NW_004955521 63437 64755 + 102005294 AGCD01068128 MODEL 8993397 protein-coding Tspan33 tetraspanin 33 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN pore complex assembly (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955479 9920192 9941395 + 102007766 AGCD01056508;AGCD01056509;GBCQ01004646;XM_005402406;XM_005402407 XP_005402463;XP_005402464 MODEL 8955886 protein-coding Camsap1 calmodulin regulated spectrin associated protein 1 ENCODES a protein that exhibits calmodulin binding (ortholog); microtubule binding (ortholog); microtubule minus-end binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); neuron projection development (ortholog); regulation of microtubule polymerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); microtubule (ortholog); microtubule minus-end (ortholog) NW_004955513 4649816 4704282 + 102018212 AGCD01066938;GBCB01024793;XM_005408534;XM_005408537;XM_013506691;XM_013506692;XM_013506693;XM_013506694 XP_005408591;XP_005408594;XP_013362145;XP_013362146;XP_013362147;XP_013362148 MODEL 9035453 ncrna LOC102018786 uncharacterized LOC102018786 NW_004955589 799399 809196 + 102018786 AGCD01076183;GBCQ01013843;XR_001232533;XR_001232534 MODEL 9042221 protein-coding Lrrtm3 leucine rich repeat transmembrane neuronal 3 INVOLVED IN positive regulation of amyloid-beta formation (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955425 19480944 19657178 + 102028314 AGCD01025692;AGCD01025693;AGCD01025694;AGCD01025695;AGCD01025696;AGCD01025697;XM_005385968 XP_005386025 MODEL 8706552 pseudo LOC102010577 fatty acid-binding protein, epidermal pseudogene NW_004955414 14243606 14244127 + 102010577 AGCD01015144 MODEL 8728765 ncrna LOC102006728 uncharacterized LOC102006728 NW_004955449 14135156 14158149 - 102006728 AGCD01042159;AGCD01042160;GBDF01209448;XR_262503 MODEL 8949700 protein-coding Tlcd3a TLC domain containing 3A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955481 2283620 2292100 + 102025791 AGCD01056873;GBBH01007264;GBDF01128173;XM_005402638;XM_013503379 XP_005402695;XP_013358833 MODEL 8780559 protein-coding Rab2a RAB2A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN autophagosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955444 18091640 18169971 - 102030675 AGCD01039229;GBCE01032380;XM_005392185 XP_005392242 MODEL 8892307 protein-coding Slc25a11 solute carrier family 25 member 11 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); oxoglutarate:malate antiporter activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN gluconeogenesis (ortholog); malate-aspartate shuttle (ortholog); PARTICIPATES IN fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; glycogen storage disease type Ia pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); pheochromocytoma/paraganglioma syndrome 6 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955467 10349378 10352649 - 102019491 AGCD01051561;GBCB01004634;XM_005399613;XM_005399615 XP_005399670;XP_005399672 MODEL 8908136 ncrna LOC102003492 uncharacterized LOC102003492 NW_004955442 7304160 7304657 + 102003492 AGCD01037623;GBDF01000001;XR_262125 MODEL 9029748 protein-coding Rheb Ras homolog, mTORC1 binding ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of cold-induced thermogenesis (ortholog); positive regulation of oligodendrocyte differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; Rheb mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Drug Resistant Epilepsy (ortholog); epilepsy (ortholog); FOUND IN dendrite (ortholog); endomembrane system (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955491 5795040 5833897 - 102003454 AGCD01060503;AGCD01060504;AGCD01060505;GBBH01062052;XM_013504611 XP_013360065 MODEL 39134386 misc_rna 7SK 7SK RNA 9045916 protein-coding Bcl7a BAF chromatin remodeling complex subunit BCL7A INVOLVED IN cellular respiration (ortholog); cognition (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); disease of cellular proliferation (ortholog); esophageal cancer (ortholog); FOUND IN SWI/SNF complex (ortholog) NW_004955482 6473535 6491398 - 102009180 AGCD01057398;GBBH01077232;GBDJ01230097;XM_005403103 XP_005403160 MODEL 8769525 protein-coding LOC102006357 cytochrome c oxidase subunit 6A2, mitochondrial ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 18 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex IV (ortholog) NW_004955493 8261297 8261961 - 102006357 AGCD01061282;GBCB01005316;XM_005405318 XP_005405375 MODEL 8964156 protein-coding Ppp1r1a protein phosphatase 1 regulatory inhibitor subunit 1A ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN extracellular region (ortholog) NW_004955458 1819366 1823864 - 102013478 AGCD01047205;GBCQ01008716;GBDI01013591;XM_013520994 XP_013376448 MODEL 39132445 rrna 5S_rRNA 5S ribosomal RNA 8768257 protein-coding Ccm2l CCM2 like scaffold protein INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac muscle tissue growth (ortholog); negative regulation of homotypic cell-cell adhesion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955422 28989242 29005827 - 102005724 AGCD01023376;AGCD01023377;GBBH01106937;GBCE01049493;XM_013514318 XP_013369772 MODEL 8873880 protein-coding Dync1i1 dynein cytoplasmic 1 intermediate chain 1 ENCODES a protein that exhibits dynein light chain binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN intracellular transport of virus (ortholog); vesicle transport along microtubule (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN axon cytoplasm (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955432 12383582 12657491 + 102018961 AGCD01030978;AGCD01030979;AGCD01030980;AGCD01030981;AGCD01030982;AGCD01030983;AGCD01030984;AGCD01030985;AGCD01030986;GBDF01161863;GBDI01243738;XM_013516078 XP_013371532 MODEL 8794771 protein-coding Polr2k RNA polymerase II, I and III subunit K INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleus (ortholog); RNA polymerase I complex (ortholog) NW_004955417 15412527 15416090 + 102015404 AGCD01018232;GBDF01122589;XM_005381864 XP_005381921 MODEL 8974772 ncrna LOC102013039 uncharacterized LOC102013039 NW_004955403 57271566 57272877 + 102013039 AGCD01003149;GBCB01111792;XR_259280 MODEL 8797383 protein-coding LOC102003847 NADH-cytochrome b5 reductase-like ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); melanoma (ortholog) NW_004955464 5065935 5087968 + 102003847 AGCD01049998;AGCD01049999;GBDJ01349008;XM_005398530;XM_005398531;XM_013521665 XP_005398587;XP_005398588;XP_013377119 MODEL 39131743 rrna 5S_rRNA 5S ribosomal RNA 9033653 protein-coding LOC102005637 cytochrome c oxidase subunit 8C, mitochondrial FOUND IN mitochondrion (ortholog) NW_004955438 15480509 15481812 + 102005637 AGCD01035370;GBDF01049097;XM_005390345 XP_005390402 MODEL 9004389 protein-coding Ddit3 DNA damage inducible transcript 3 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); apoptotic process (ortholog); artery development (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); Acute-Phase Reaction (ortholog); FOUND IN CHOP-ATF3 complex (ortholog); CHOP-ATF4 complex (ortholog); CHOP-C/EBP complex (ortholog) NW_004955458 5232979 5238513 - 102003212 AGCD01047470;GBDF01053797;XM_005397386 XP_005397443 MODEL 8883745 ncrna LOC102007891 uncharacterized LOC102007891 NW_004955417 4393900 4397203 + 102007891 AGCD01017946;GBDF01263566;XR_260459 MODEL 8956036 protein-coding Chst14 carbohydrate sulfotransferase 14 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan metabolic process (ortholog); ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); autism spectrum disorder (ortholog); clubfoot (ortholog) NW_004955416 7391281 7393137 + 102021967 AGCD01016977;GBCQ01154295;GBDJ01229673;XM_005381242 XP_005381299 MODEL 8791883 protein-coding LOC102012651 olfactory receptor 5V1-like NW_004955418 30263575 30290368 + 102012651 AGCD01019508;AGCD01019509;AGCD01019510;AGCD01019511;XM_005382371 XP_005382428 MODEL 8918424 protein-coding Rarg retinoic acid receptor gamma ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); bone morphogenesis (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiotoxicity (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955458 480257 501172 - 102016349 AGCD01047129;AGCD01047130;GBCC01032927;XM_013520911;XM_013520912;XM_013520913;XM_013520914 XP_013376365;XP_013376366;XP_013376367;XP_013376368 MODEL 8766123 protein-coding Sirt1 sirtuin 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); caspase binding (ortholog); deacetylase activity (ortholog); INVOLVED IN angiogenesis (ortholog); behavioral response to starvation (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN histone modification pathway; hypoxia inducible factor pathway; p53 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); chromatin silencing complex (ortholog) NW_004955425 20280725 20307663 + 102003783 AGCD01025726;AGCD01025727;AGCD01025728;GBCE01123136;GBDF01081323;XM_013514840 XP_013370294 MODEL 39133826 misc_rna 7SK 7SK RNA 9049852 protein-coding Samd7 sterile alpha motif domain containing 7 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); retinal rod cell development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); macular degeneration (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); PRC1 complex (ortholog) NW_004955420 161353 178768 + 102015524 AGCD01020535;XM_005382960;XM_013513564 XP_005383017;XP_013369018 MODEL 8722880 protein-coding Armcx5 armadillo repeat containing X-linked 5 NW_004955548 107660 113316 + 102019741 AGCD01072317;XM_013508519;XM_013508520 XP_013363973;XP_013363974 MODEL 9019771 pseudo LOC102006731 thymosin beta-10 pseudogene NW_004955402 41974553 41978585 + 102006731 AGCD01001028;XM_005372978 MODEL 8938904 protein-coding Dhcr7 7-dehydrocholesterol reductase ENCODES a protein that exhibits 7-dehydrocholesterol reductase activity (ortholog); cholesterol-5,6-oxide hydrolase activity (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); INVOLVED IN blood vessel development (ortholog); cell differentiation (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN cholesterol biosynthetic pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); Animal Disease Models (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear outer membrane (ortholog) NW_004955422 15119155 15136771 + 102016485 AGCD01022876;GBCE01123738;XM_005384227;XM_005384228;XM_005384229;XM_013514319 XP_005384284;XP_005384285;XP_005384286;XP_013369773 MODEL 8822861 protein-coding Foxr1 forkhead box R1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN brain development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955412 20096633 20108344 + 102022266 AGCD01012992;AGCD01012993;GBDF01050668;XM_005378289;XM_013511128;XM_013511129 XP_005378346;XP_013366582;XP_013366583 MODEL 8974742 pseudo LOC102011366 protein RUFY3 pseudogene NW_004955442 14907176 14908675 + 102011366 AGCD01037848 MODEL 8997577 pseudo LOC102022132 geranylgeranyl transferase type-1 subunit beta pseudogene NW_004955561 354024 359834 + 102022132 AGCD01073821 MODEL 9046561 ncrna LOC102006358 uncharacterized LOC102006358 NW_004955494 958163 966632 + 102006358 AGCD01061389;GBDI01027847;XR_264101 MODEL 8776110 protein-coding Cpap centrosome assembly and centriole elongation protein ENCODES a protein that exhibits gamma-tubulin binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astral microtubule nucleation (ortholog); centriole assembly (ortholog); centriole elongation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autosomal recessive primary microcephaly (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955497 432595 497335 - 102005612 AGCD01062411;AGCD01062412;AGCD01062413;AGCD01062414;AGCD01062415;AGCD01062416;AGCD01062417;AGCD01062418;AGCD01062419;AGCD01062420;GBDF01124703;XM_005406290;XM_013505458;XM_013505459;XM_013505460;XM_013505461 XP_005406347;XP_013360912;XP_013360913;XP_013360914;XP_013360915 MODEL 8726454 pseudo LOC102026006 UDP-N-acetylglucosamine transporter-like NW_004955481 1573638 1578463 - 102026006 AGCD01056837;AGCD01056838 MODEL 9017252 protein-coding Ptpra protein tyrosine phosphatase receptor type A ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); integrin-mediated signaling pathway (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal cancer (ortholog); gastric adenocarcinoma (ortholog); FOUND IN focal adhesion (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955415 13819934 13967068 + 102020110 AGCD01016269;AGCD01016270;AGCD01016271;AGCD01016272;AGCD01016273;AGCD01016274;AGCD01016275;AGCD01016276;AGCD01016277;AGCD01016278;GBCE01032562;XM_005380770;XM_005380771;XM_013512312;XM_013512313 XP_005380827;XP_005380828;XP_013367766;XP_013367767 MODEL 39133305 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 8765406 pseudo LOC102029922 interleukin-1 receptor accessory protein pseudogene NW_004955450 4891873 4894423 + 102029922 AGCD01042485 MODEL 8770617 protein-coding Xrcc6 X-ray repair cross complementing 6 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular hyperosmotic salinity response (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); basal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); DNA-dependent protein kinase complex (ortholog) NW_004955413 27135785 27158344 + 102021869 AGCD01014495;AGCD01014496;GBCE01053767;XM_005379361;XM_005379362;XM_005379363;XM_005379364;XM_013511358;XM_013511359;XM_013511360 XP_005379418;XP_005379419;XP_005379420;XP_005379421;XP_013366812;XP_013366813;XP_013366814 MODEL 8913707 protein-coding Ezhip EZH inhibitory protein ENCODES a protein that exhibits histone methyltransferase inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chromatin organization (ortholog); epigenetic regulation of gene expression (ortholog); oocyte development (ortholog); ASSOCIATED WITH posterior fossa group A ependymoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955543 2532636 2537978 + 102026259 AGCD01071655;AGCD01071656;GBDF01237876;XM_013508142 XP_013363596 MODEL 39133341 snrna U4 U4 spliceosomal RNA 150537110 snorna SNORD72 Small nucleolar RNA SNORD72 8846729 pseudo LOC102025304 high mobility group protein B1 pseudogene NW_004955402 47542016 47542603 + 102025304 AGCD01001190 MODEL 8732307 protein-coding Taok3 TAO kinase 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); MAPK cascade (ortholog); marginal zone B cell differentiation (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); membrane raft (ortholog) NW_004955455 13020618 13207539 + 102019028 AGCD01046056;AGCD01046057;AGCD01046058;AGCD01046059;AGCD01046060;GBDF01250902;XM_005396533;XM_005396534 XP_005396590;XP_005396591 MODEL 8805101 protein-coding Lrrtm4 leucine rich repeat transmembrane neuronal 4 ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); neurotransmitter-gated ion channel clustering (ortholog); regulation of presynaptic membrane organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955424 8606660 9277125 + 102014919 AGCD01024476;AGCD01024477;AGCD01024478;AGCD01024479;AGCD01024480;AGCD01024481;AGCD01024482;AGCD01024483;AGCD01024484;AGCD01024485;AGCD01024486;AGCD01024487;AGCD01024488;AGCD01024489;AGCD01024490;AGCD01024491;GBBH01131117;XM_005385460 XP_005385517 MODEL 8866371 protein-coding CUNH11orf71 chromosome unknown C11orf71 homolog NW_004955412 15995551 15996159 - 102012415 AGCD01012888;GBDI01171582;XM_005415374 XP_005415431 MODEL 8996395 pseudo LOC102009404 sorting nexin-6 pseudogene NW_004955427 21883319 21885923 - 102009404 AGCD01027461 MODEL 9003787 protein-coding Egln1 egl-9 family hypoxia inducible factor 1 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); heart trabecula formation (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955492 7407800 7454851 + 102007130 AGCD01060797;AGCD01060798;GBCB01005053;GBCQ01067610;XM_005404970 XP_005405027 MODEL 10276258 ncrna LOC106147499 uncharacterized LOC106147499 NW_004955408 25659454 25665560 - 106147499 AGCD01008649;GBDK01249518;XR_001232425;XR_001232426 MODEL 9025322 protein-coding Rhebl1 RHEB like 1 ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); TOR signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955500 7894686 7898035 - 102014584 AGCD01063955;GBDF01077128;XM_005406691 XP_005406748 MODEL 8927401 protein-coding Ipo8 importin 8 INVOLVED IN positive regulation of RNA import into nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955505 4490738 4574969 + 102013193 AGCD01065114;AGCD01065115;AGCD01065116;GBDF01126107;XM_005407134 XP_005407191 MODEL 8818861 protein-coding Ppp1r1b protein phosphatase 1 regulatory inhibitor subunit 1B ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); D2 dopamine receptor binding (ortholog); D3 dopamine receptor binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to cocaine (ortholog); DNA-templated transcription (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); brain infarction (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine head (ortholog); dendritic spine neck (ortholog) NW_004955451 14378186 14394910 + 102020077 AGCD01043550;AGCD01043551;AGCD01043552;GBDI01001254;XM_013519237 XP_013374691 MODEL 8737937 ncrna LOC102005638 uncharacterized LOC102005638 NW_004955439 17644083 17645810 + 102005638 AGCD01036042;GBDF01110804;XR_001235185;XR_261994 MODEL 9013490 protein-coding LOC102018787 uncharacterized LOC102018787 NW_004955450 3641318 3645239 + 102018787 AGCD01042439;GBDJ01361209;XM_005393575 XP_005393632 MODEL 8920865 ncrna LOC102010579 uncharacterized LOC102010579 NW_004955416 6320380 6345046 + 102010579 AGCD01016940;AGCD01016941;XR_260358 MODEL 8837795 protein-coding Tlcd3b TLC domain containing 3B ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cone-rod dystrophy 22 (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955493 6929477 6940109 + 102024921 AGCD01061148;AGCD01061149;GBDF01049970;XM_005405196;XM_005405197;XM_005405198;XM_005405199 XP_005405253;XP_005405254;XP_005405255;XP_005405256 MODEL 8846088 protein-coding Chst15 carbohydrate sulfotransferase 15 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate binding (ortholog); N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity (ortholog); INVOLVED IN hexose biosynthetic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); Lung Neoplasms (ortholog) NW_004955477 2065251 2147565 - 102028294 AGCD01055517;GBDI01354926;XM_005401967;XM_013503071;XM_013503072;XM_013503073;XM_013503074 XP_005402024;XP_013358525;XP_013358526;XP_013358527;XP_013358528 MODEL 10192202 ncrna LOC106148587 uncharacterized LOC106148587 NW_004955424 1910931 1919250 + 106148587 AGCD01024250;GBDK01130691;XR_001234163 MODEL 39134387 misc_rna 7SK 7SK RNA 8706302 protein-coding Emd emerin ENCODES a protein that exhibits actin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cellular response to growth factor stimulus (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); dilated cardiomyopathy 1A (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955580 864532 866904 - 102027697 AGCD01075627;GBDK01089927;XM_005414187 XP_005414244 MODEL 39133828 misc_rna 7SK 7SK RNA 8795932 protein-coding Rarres1 retinoic acid receptor responder 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Familial Pancreatic Carcinoma (ortholog); follicular lymphoma (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog) NW_004955448 9437365 9466565 - 102027799 AGCD01041474;GBDJ01011329;XM_005393105;XM_005393106;XM_013518647;XM_013518648 XP_005393162;XP_005393163;XP_013374101;XP_013374102 MODEL 9008630 pseudo LOC102005302 protein C3orf33 pseudogene NW_004955438 15478440 15479305 - 102005302 AGCD01035370 MODEL 39132448 rrna 5S_rRNA 5S ribosomal RNA 8909255 protein-coding Bcl7b BAF chromatin remodeling complex subunit BCL7B ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN SWI/SNF complex (ortholog) NW_004955456 14149484 14166753 + 102027944 AGCD01046634;GBDK01074047;XM_005396784;XM_013520575;XR_262902 XP_005396841;XP_013376029 MODEL 8833633 protein-coding Tspan4 tetraspanin 4 ENCODES a protein that exhibits antigen binding (ortholog); integrin binding (ortholog); INVOLVED IN mitocytosis (ortholog); protein-containing complex assembly (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN migrasome (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955476 11277881 11291008 - 102007656 AGCD01055446;AGCD01055447;GBDK01000814;XM_005401804;XM_005401805;XM_013502958 XP_005401861;XP_005401862;XP_013358412 MODEL 10256792 protein-coding Polr2l RNA polymerase II, I and III subunit L ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase I complex (ortholog) NW_004955476 11291215 11293536 + 106146378 AGCD01055447;AY533215;GBDI01017433;XM_013502959 AAS59418;Q6QN04;XP_013358413 MODEL 8867808 ncrna LOC102003849 uncharacterized LOC102003849 NW_004955412 914841 917029 + 102003849 AGCD01012505;GBDK01170246;XR_259961 MODEL 8958003 pseudo LOC102013043 60S ribosomal protein L29 pseudogene NW_004955404 82336 85302 + 102013043 AGCD01003194 MODEL 8889311 protein-coding Ccn1 cellular communication network factor 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process involved in heart morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrioventricular valve morphogenesis (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Heart Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955423 8416498 8419029 - 102024022 AGCD01023629;GBBH01030882;XM_005385136 XP_005385193 MODEL 8865878 protein-coding Dync1i2 dynein cytoplasmic 1 intermediate chain 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955449 3204839 3256059 - 102018042 AGCD01041845;AGCD01041846;GBDJ01007532;XM_005393228;XM_005393230;XM_005393231;XM_013518773;XM_013518774 XP_005393285;XP_005393287;XP_005393288;XP_013374227;XP_013374228 MODEL 8760463 ncrna LOC102007892 uncharacterized LOC102007892 NW_004955417 12654544 12663569 - 102007892 AGCD01018162;GBDF01040430;XR_001233450;XR_260476 MODEL 9056006 protein-coding Ddit4 DNA damage inducible transcript 4 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); leukemia (ortholog); mouth disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955437 19322407 19324562 - 102029555 AGCD01034844;GBDJ01073108;XM_005390015 XP_005390072 MODEL 39132814 snorna SNORA63 Small nucleolar RNA SNORA63 8913001 protein-coding LOC102026009 uncharacterized LOC102026009 NW_004955418 6811123 6824711 - 102026009 AGCD01018882;AGCD01018883;GBDJ01282837;XM_005382344 XP_005382401 MODEL 8958963 protein-coding Ptprb protein tyrosine phosphatase receptor type B ENCODES a protein that exhibits cadherin binding (ortholog); protein tyrosine phosphatase activity (ortholog); transmembrane receptor protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); glial cell migration (ortholog); osteoblast differentiation (ortholog); ASSOCIATED WITH angiosarcoma (ortholog); brain glioma (ortholog); breast angiosarcoma (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955405 10647777 10766909 - 102028492 AGCD01004816;AGCD01004817;AGCD01004818;AGCD01004819;AGCD01004820;AGCD01004821;AGCD01004822;GBDK01004065;XM_005374311;XM_005374312 XP_005374368;XP_005374369 MODEL 8756232 protein-coding LOC102012655 PRAME family member 9/15-like NW_004955486 31204 93920 - 102012655 AGCD01058788;AGCD01058789;AGCD01058790;AGCD01058791;AGCD01058792;AGCD01058793;AGCD01058794;AGCD01058795;AGCD01058796;AGCD01058797;AGCD01058798;AGCD01058799;AGCD01058800;GBBH01072713;XM_013504133 XP_013359587 MODEL 39133342 snrna U4 U4 spliceosomal RNA 8854225 protein-coding LOC102003495 protein PBDC1-like NW_004955562 2207581 2209840 + 102003495 AGCD01074028;GBCE01099202;GBDI01000979;XM_005413095 XP_005413152 MODEL 8787143 protein-coding Rab2b RAB2B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN defense response to virus (ortholog); Golgi organization (ortholog); innate immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); autophagosome membrane (ortholog); Golgi apparatus (ortholog) NW_004955550 2180326 2195523 - 102013652 AGCD01072611;GBDF01007040;XM_005412119 XP_005412176 MODEL 39132934 snorna SNORD73 Small nucleolar RNA SNORD73 8730526 protein-coding Samd8 sterile alpha motif domain containing 8 ENCODES a protein that exhibits ceramide phosphoethanolamine synthase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide phosphoethanolamine biosynthetic process (ortholog); regulation of ceramide biosynthetic process (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 16900756 16969042 - 102028336 AGCD01034718;AGCD01034719;AGCD01034720;AGCD01034721;AGCD01034722;AGCD01034723;GBDF01153789;GBDI01243361;XM_005389922 XP_005389979 MODEL 8741443 pseudo LOC102006733 spindle and kinetochore-associated protein 2-like NW_004955403 19423695 19424310 - 102006733 AGCD01002125 MODEL 8963181 protein-coding Sirt2 sirtuin 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); INVOLVED IN cellular response to caloric restriction (ortholog); cellular response to epinephrine stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955468 626365 644441 + 102005244 AGCD01051719;GBDF01006521;XM_005399813;XM_005399815;XM_005399816;XM_005399817;XM_005399818;XM_005399819;XM_005399820 XP_005399870;XP_005399872;XP_005399873;XP_005399874;XP_005399875;XP_005399876;XP_005399877 MODEL 8715999 protein-coding Foxred1 FAD dependent oxidoreductase domain containing 1 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955412 27293467 27300522 + 102004367 AGCD01013233;GBBH01209105;XM_005378501;XM_013511027 XP_005378558;XP_013366481 MODEL 8812671 protein-coding Tap1 transporter 1, ATP binding cassette subfamily B member ENCODES a protein that exhibits ABC-type peptide antigen transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); cytosol to endoplasmic reticulum transport (ortholog); defense response (ortholog); ASSOCIATED WITH allergic disease (ortholog); ankylosing spondylitis (ortholog); asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955437 1504549 1511110 - 102009988 AGCD01034212;GBBH01001146;GBDJ01003324;XM_013516935 XP_013372389 MODEL 8954667 protein-coding Dhdds dehydrodolichyl diphosphate synthase subunit ENCODES a protein that exhibits ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN dolichyl diphosphate biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN dehydrodolichyl diphosphate synthase complex (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955452 5811053 5844992 + 102017944 AGCD01044055;AGCD01044056;AGCD01044057;AGCD01044058;GBDK01196360;XM_005394858;XM_013519674 XP_005394915;XP_013375128 MODEL 9037517 protein-coding LOC102009405 suppressor protein SRP40-like NW_004955428 50432 51439 - 102009405 AGCD01027559;XM_005386839 XP_005386896 MODEL 39131592 rrna 5S_rRNA 5S ribosomal RNA 8949909 pseudo LOC102006363 eukaryotic translation initiation factor 1 pseudogene NW_004955423 9833774 9834101 - 102006363 AGCD01023668 MODEL 9004579 pseudo LOC102011370 olfactory receptor 7G1-like NW_004955563 374406 376655 + 102011370 AGCD01074064 MODEL 39132452 rrna 5S_rRNA 5S ribosomal RNA 8797341 protein-coding Egln2 egl-9 family hypoxia inducible factor 2 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); ferrous iron binding (ortholog); hypoxia-inducible factor-proline dioxygenase activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); positive regulation of protein catabolic process (ortholog); regulation of neuron apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH nicotine dependence (ortholog); renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955578 541723 557609 - 102003188 AGCD01075488;AGCD01075489;GBDK01016596;XM_005414013;XM_005414014;XR_265083 XP_005414070;XP_005414071 MODEL 8977030 protein-coding Cpb1 carboxypeptidase B1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); lung cancer (ortholog); stomach cancer (ortholog) NW_004955474 8632733 8697197 - 102015836 AGCD01054555;AGCD01054556;GBDJ01389119;XM_005401424;XM_013502714 XP_005401481;XP_013358168 MODEL 9049002 pseudo LOC102029934 ubiquitin-like-conjugating enzyme ATG3 NW_004955453 1111659 1113712 + 102029934 AGCD01044606 MODEL 8896772 protein-coding LOC102024178 uncharacterized LOC102024178 NW_004955584 208498 209484 - 102024178 AGCD01075926;GBDF01224162;XM_005414409 XP_005414466 MODEL 9059429 protein-coding Ppp1r1c protein phosphatase 1 regulatory inhibitor subunit 1C ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 15219140 15340467 - 102018247 AGCD01002042;GBCQ01047452;XM_013515176 XP_013370630 MODEL 8733915 pseudo LOC102025306 zinc finger and BTB domain-containing protein 44 pseudogene NW_004955600 457007 459128 + 102025306 AGCD01076723 MODEL 8951388 ncrna LOC102010581 uncharacterized LOC102010581 NW_004955478 6558216 6561171 + 102010581 AGCD01055900;GBDF01140094;XR_001230864;XR_263703 MODEL 8784901 protein-coding Lrsam1 leucine rich repeat and sterile alpha motif containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of endocytosis (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of xenophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955419 1121127 1154356 - 102030312 AGCD01019641;AGCD01019642;AGCD01019643;GBCQ01101040;XM_005382423;XM_013513214 XP_005382480;XP_013368668 MODEL 8767340 ncrna LOC102022133 uncharacterized LOC102022133 NW_004955563 1392184 1393331 + 102022133 AGCD01074145;GBDF01189491;XR_265016 MODEL 8853396 protein-coding CUNH11orf87 chromosome unknown C11orf87 homolog NW_004955412 11447935 11455153 + 102008205 AGCD01012795;XM_005378044;XM_005378045;XM_005378046;XM_005378047 XP_005378101;XP_005378102;XP_005378103;XP_005378104 MODEL 9044543 protein-coding Eme1 essential meiotic structure-specific endonuclease 1 ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN double-strand break repair (ortholog); replication fork processing (ortholog); resolution of mitotic recombination intermediates (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); endodeoxyribonuclease complex (ortholog); heterochromatin (ortholog) NW_004955451 11328759 11336099 - 102014521 AGCD01043349;GBDK01116633;XM_005394175;XM_013519096 XP_005394232;XP_013374550 MODEL 10185753 ncrna LOC106147501 uncharacterized LOC106147501 NW_004955569 1585930 1589649 - 106147501 AGCD01074671;GBDJ01218452;XR_001232428 MODEL 8765089 protein-coding Rhex regulator of hemoglobinization and erythroid cell expansion ENCODES a protein that exhibits erythropoietin receptor binding (ortholog); INVOLVED IN cellular response to erythropoietin (ortholog); erythropoietin-mediated signaling pathway (ortholog); positive regulation of erythrocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 41687577 41703282 + 102016446 AGCD01006688;GBDK01309194;XM_005375383;XM_005375384;XM_013523064 XP_005375440;XP_005375441;XP_013378518 MODEL 8949000 protein-coding Bcl7c BAF chromatin remodeling complex subunit BCL7C ASSOCIATED WITH Ependymomas (ortholog); FOUND IN SWI/SNF complex (ortholog) NW_004955493 7728229 7733086 - 102022395 AGCD01061222;GBCC01020237;XM_005405278 XP_005405335 MODEL 9041949 protein-coding Ipo9 importin 9 ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); nuclear import signal receptor activity (ortholog); INVOLVED IN proteasome localization (ortholog); protein import into nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955406 37898415 37946991 + 102018890 AGCD01006580;GBDF01003416;XM_005375192;XM_005375193 XP_005375249;XP_005375250 MODEL 9055161 protein-coding Slc25a12 solute carrier family 25 member 12 ENCODES a protein that exhibits 3-sulfino-L-alanine: proton, glutamate antiporter activity (ortholog); acidic amino acid transmembrane transporter activity (ortholog); aspartate:glutamate, proton antiporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); intracellular glutamate homeostasis (ortholog); L-glutamate transmembrane transport (ortholog); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Asperger syndrome (ortholog); autistic disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955449 3093603 3182513 + 102017288 AGCD01041845;GBCQ01007693;GBDJ01025625;XM_005393225 XP_005393282 MODEL 8896652 protein-coding LOC102018789 protocadherin alpha-10-like NW_004955611 330456 333750 - 102018789 AGCD01077163;XM_013510124 XP_013365578 MODEL 8892171 protein-coding Ezr ezrin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); astral microtubule organization (ortholog); PARTICIPATES IN FasL mediated signaling pathway; parathyroid hormone signaling pathway; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical part of cell (ortholog) NW_004955439 3701722 3740345 + 102010409 AGCD01035688;GBCE01002353;XM_013517360 XP_013372814 MODEL 8984781 protein-coding Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); microtubule-based movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); endocytic vesicle membrane (ortholog) NW_004955620 46535 82595 - 102016219 AGCD01077361;GBDF01045921;XM_005415011;XM_013510152 XP_005415068;XP_013365606 MODEL 9019253 protein-coding Ccn2 cellular communication network factor 2 ENCODES a protein that exhibits fibronectin binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN angiogenesis (ortholog); calcium ion transmembrane import into cytosol (ortholog); cartilage condensation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Aggressive Fibromatosis (ortholog); aortic valve insufficiency (ortholog); FOUND IN cell cortex (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955436 12523602 12526986 - 102003277 AGCD01033842;AGCD01033843;GBCE01002481;GBDJ01011208;XM_013516697 XP_013372151 MODEL 8906872 protein-coding Ddit4l DNA damage inducible transcript 4 like ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955496 7618731 7622180 + 102003154 AGCD01062383;GBDJ01422210;XM_005406287 XP_005406344 MODEL 39133343 snrna U4 U4 spliceosomal RNA 10341579 ncrna LOC106148588 uncharacterized LOC106148588 NW_004955402 1403132 1409404 - 106148588 AGCD01000055;XR_001234177 MODEL 39133830 misc_rna 7SK 7SK RNA 9046892 protein-coding Rarres2 retinoic acid receptor responder 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to insulin stimulus (ortholog); embryonic digestive tract development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); essential hypertension (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); G protein-coupled receptor complex (ortholog) NW_004955491 4954809 4957724 - 102020453 AGCD01060465;GBDF01126597;XM_005404775;XM_005404776;XM_005404777;XM_005404778 XP_005404832;XP_005404833;XP_005404834;XP_005404835 MODEL 9067964 ncrna LOC102005311 uncharacterized LOC102005311 NW_004955443 3210313 3216060 - 102005311 AGCD01038188;GBDF01281727;XR_262174 MODEL 9039588 ncrna LOC102010585 uncharacterized LOC102010585 NW_004955418 15889079 15907996 + 102010585 AGCD01019113;GBDF01085813;XR_001233526;XR_001233527;XR_260559 MODEL 8763331 protein-coding Sirt3 sirtuin 3 ENCODES a protein that exhibits enzyme binding (ortholog); histone H3K14 deacetylase activity, NAD-dependent (ortholog); NAD-dependent protein lysine deacetylase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); mitochondrial fusion (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955476 11794951 11826244 + 102028186 AGCD01055474;AGCD01055475;GBBH01140166;XM_005401880;XM_005401881;XM_005401882;XM_005401884;XM_005401885;XM_013502916 XP_005401937;XP_005401938;XP_005401939;XP_005401941;XP_005401942;XP_013358370 MODEL 10353094 ncrna LOC106148589 uncharacterized LOC106148589 NW_004955402 1414812 1431909 + 106148589 AGCD01000055;XR_001234181;XR_001234186;XR_001234188 MODEL 9032292 protein-coding LOC102009408 von Ebner gland protein 1-like NW_004955513 2571693 2576942 + 102009408 AGCD01066882;GBBH01002065;XM_005408419 XP_005408476 MODEL 8892951 ncrna LOC102007893 uncharacterized LOC102007893 NW_004955417 25416076 25425950 - 102007893 AGCD01018480;GBDF01236896;XR_260494 MODEL 8852360 protein-coding LOC102005641 sialic acid-binding Ig-like lectin 13 NW_004955558 974508 988735 + 102005641 AGCD01073408;AGCD01073409;GBBH01177448;XM_013508883 XP_013364337 MODEL 8936327 protein-coding Armh1 armadillo like helical domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955464 13501662 13552953 - 102015702 AGCD01050288;AGCD01050289;GBDI01129428;XM_013521637;XM_013521638;XM_013521639;XM_013521640;XM_013521641;XM_013521642;XM_013521643;XM_013521644;XM_013521645;XM_013521646;XM_013521647 XP_013377091;XP_013377092;XP_013377093;XP_013377094;XP_013377095;XP_013377096;XP_013377097;XP_013377098;XP_013377099;XP_013377100;XP_013377101 MODEL 39132817 snorna SNORA63 Small nucleolar RNA SNORA63 8858931 pseudo LOC102024180 protein DBF4 homolog A pseudogene NW_004955612 134262 137323 + 102024180 AGCD01077180 MODEL 8907285 protein-coding Eme2 essential meiotic structure-specific endonuclease subunit 2 ENCODES a protein that exhibits DNA endonuclease activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair (ortholog); replication fork processing (ortholog); resolution of mitotic recombination intermediates (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); endodeoxyribonuclease complex (ortholog); nuclear replication fork (ortholog) NW_004955442 15492925 15496639 - 102020060 AGCD01037875;GBBH01185829;XM_005391517 XP_005391574 MODEL 8717866 ncrna LOC102012658 uncharacterized LOC102012658 NW_004955421 25068843 25105800 + 102012658 AGCD01022227;AGCD01022228;GBCQ01032486;XR_260828 MODEL 8777949 protein-coding Ppp1r2 protein phosphatase 1 regulatory inhibitor subunit 2 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN dendritic spine (ortholog); growth cone (ortholog) NW_004955420 13592508 13613165 + 102024684 AGCD01020925;GBDI01077892;XM_005415381;XM_013513575 XP_005415438;XP_013369029 MODEL 8770545 protein-coding Tlcd4 TLC domain containing 4 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955435 278795 351707 + 102020947 AGCD01032720;AGCD01032721;AGCD01032722;GBCQ01033522;XM_013516468;XM_013516469;XM_013516470;XM_013516471;XM_013516472;XM_013516473;XM_013516474;XM_013516475;XM_013516476 XP_013371922;XP_013371923;XP_013371924;XP_013371925;XP_013371926;XP_013371927;XP_013371928;XP_013371929;XP_013371930 MODEL 9036916 protein-coding Chst2 carbohydrate sulfotransferase 2 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955508 2821724 2824926 - 102010290 AGCD01065797;GBDF01015115;GBDK01277980;XM_005407731 XP_005407788 MODEL 39132935 snorna SNORD73 Small nucleolar RNA SNORD73 8964633 protein-coding Camsap2 calmodulin regulated spectrin associated protein family member 2 ENCODES a protein that exhibits microtubule minus-end binding (ortholog); INVOLVED IN axon development (ortholog); microtubule cytoskeleton organization (ortholog); regulation of dendrite development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955406 36958337 37055748 + 102005771 AGCD01006570;AGCD01006571;GBCQ01093718;XM_005375145;XM_005375146;XM_005375147 XP_005375202;XP_005375203;XP_005375204 MODEL 9054769 protein-coding Slc25a13 solute carrier family 25 member 13 ENCODES a protein that exhibits 3-sulfino-L-alanine: proton, glutamate antiporter activity (ortholog); acidic amino acid transmembrane transporter activity (ortholog); aspartate:glutamate, proton antiporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); ATP biosynthetic process (ortholog); cellular respiration (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult-onset type II citrullinemia (ortholog); Bone Fractures (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955432 12685253 12788307 - 102029430 AGCD01030990;AGCD01030991;AGCD01030992;GBDI01262669;GBDJ01025645;XM_013515919 XP_013371373 MODEL 8927295 protein-coding LOC102006734 cathelin-like NW_004956037 8257 8882 - 102006734 AGCD01078923;GBCE01101299;XM_013510217 XP_013365671 MODEL 8923859 protein-coding Samd9 sterile alpha motif domain containing 9 INVOLVED IN endosomal vesicle fusion (ortholog); ASSOCIATED WITH Addison's disease (ortholog); Adrenal Insufficiency (ortholog); Alacrima (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955432 9957521 9972622 - 102006812 AGCD01030920;GBDK01359400;XM_005388025;XM_013516068;XM_013516069;XM_013516070;XM_013516071 XP_005388082;XP_013371522;XP_013371523;XP_013371524;XP_013371525 MODEL 39131466 protein-coding CCN3 cellular communication network factor 3 8990220 protein-coding Polr2m RNA polymerase II subunit M ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); INVOLVED IN maintenance of ER location (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); FOUND IN neuronal cell body (ortholog); nuclear envelope (ortholog); nucleus (ortholog) NW_004955450 16633975 16642085 - 102018875 AGCD01042847;AGCD01042848;GBDI01062092;XM_005393846 XP_005393903 MODEL 8701340 protein-coding Tspan5 tetraspanin 5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955405 8725761 8759784 - 102020520 AGCD01004751;GBCQ01094713;GBDF01221548;XM_013517460 XP_013372914 MODEL 8776952 pseudo LOC102006370 non-histone chromosomal protein HMG-17 pseudogene NW_004955427 21180390 21189979 - 102006370 AGCD01027432;AGCD01027433;XR_261284 MODEL 8718847 protein-coding Tap2 transporter 2, ATP binding cassette subfamily B member ENCODES a protein that exhibits ABC-type peptide antigen transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent (ortholog); antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Alzheimer's disease (ortholog); ankylosing spondylitis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955437 1480217 1499032 - 102022851 AGCD01034211;AGCD01034212;GBDK01022859;XM_013516933;XM_013516934 XP_013372387;XP_013372388 MODEL 8740018 ncrna LOC102013044 uncharacterized LOC102013044 NW_004955452 10168123 10182403 + 102013044 AGCD01044270;XR_262673 MODEL 39131593 rrna 5S_rRNA 5S ribosomal RNA 8947356 protein-coding LOC102003850 putative vomeronasal receptor-like protein 4 NW_004955465 12732451 12749417 - 102003850 AGCD01050556;AGCD01050557;AGCD01050558;GBDF01114303;XM_005398941;XM_013521802;XM_013521803;XM_013521804;XM_013521805 XP_005398998;XP_013377256;XP_013377257;XP_013377258;XP_013377259 MODEL 8740003 ncrna LOC102011372 uncharacterized LOC102011372 NW_004955445 18244255 18269680 - 102011372 AGCD01039901;GBCQ01003080;XR_001235583;XR_001235584;XR_001235585;XR_001235586;XR_001235587;XR_001235588;XR_001235589;XR_001235590;XR_001235591;XR_001235592 MODEL 39132462 rrna 5S_rRNA 5S ribosomal RNA 9068205 pseudo LOC102022135 olfactory receptor 5V1-like NW_004955568 1014704 1015512 - 102022135 AGCD01074537 MODEL 8843732 protein-coding Egln3 egl-9 family hypoxia inducible factor 3 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); hypoxia-inducible factor-proline dioxygenase activity (ortholog); peptidyl-proline 4-dioxygenase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of ferroptosis (ortholog); protein stabilization (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955409 26939933 26967156 + 102007741 AGCD01010203;GBCQ01004650;XM_005376943 XP_005377000 MODEL 8776080 pseudo LOC102029940 peptidyl-prolyl cis-trans isomerase G-like NW_004955408 30345114 30362461 - 102029940 AGCD01008805;AGCD01008806 MODEL 9037785 protein-coding Cpb2 carboxypeptidase B2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); fibrinolysis (ortholog); liver regeneration (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH amenorrhea (ortholog); Angina Pectoris (ortholog); Bacteremia (ortholog); FOUND IN extracellular region (ortholog) NW_004955518 3740348 3803540 - 102018634 AGCD01067808;AGCD01067809;AGCD01067810;GBDF01190736;XM_005409096;XM_005409097 XP_005409153;XP_005409154 MODEL 10307026 ncrna LOC106148590 uncharacterized LOC106148590 NW_004955424 22114824 22125669 - 106148590 AGCD01024933;GBDI01194000;XR_001234180 MODEL 8963119 ncrna LOC102003499 uncharacterized LOC102003499 NW_004955446 7604429 7625603 + 102003499 AGCD01040126;GBDF01002983;XR_262378;XR_262379 MODEL 8965695 protein-coding Rab30 RAB30, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN Golgi organization (ortholog); lipid homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN autolysosome membrane (ortholog); autophagosome membrane (ortholog); cis-Golgi network (ortholog) NW_004955414 9497276 9582747 + 102028176 AGCD01015027;AGCD01015028;GBCE01114038;XM_005379804;XM_005379805;XM_005379807;XM_013512054 XP_005379861;XP_005379862;XP_005379864;XP_013367508 MODEL 8788629 pseudo LOC102018791 zinc finger and BTB domain-containing protein 16-like NW_004955670 20782 22615 - 102018791 AGCD01077935 MODEL 8702201 pseudo LOC102005642 T-complex protein 1 subunit theta pseudogene NW_004955443 13804351 13806658 - 102005642 AGCD01038484 MODEL 8735237 protein-coding Foxred2 FAD dependent oxidoreductase domain containing 2 ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); INVOLVED IN ERAD pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955413 23070715 23091402 - 102020232 AGCD01014326;GBCQ01030988;XM_005379162;XM_005379163 XP_005379219;XP_005379220 MODEL 8881077 ncrna LOC102003500 uncharacterized LOC102003500 NW_004955575 638720 645615 + 102003500 AGCD01075227;GBDK01352758;XR_265069 MODEL 8977210 protein-coding LOC102024182 trafficking protein particle complex subunit 2-like NW_004955405 29926824 29930245 - 102024182 AGCD01005262;GBDF01119098;XM_005374461;XR_259410 XP_005374518 MODEL 8816666 protein-coding Xrn1 5'-3' exoribonuclease 1 ENCODES a protein that exhibits 5'-3' RNA exonuclease activity (ortholog); G-quadruplex DNA binding (ortholog); G-quadruplex RNA binding (ortholog); INVOLVED IN cellular response to cycloheximide (ortholog); cellular response to puromycin (ortholog); histone mRNA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955508 3441540 3561896 + 102014073 AGCD01065811;AGCD01065812;AGCD01065813;AGCD01065814;AGCD01065815;AGCD01065816;GBBH01016162;XM_005407742;XM_013506250;XM_013506251;XM_013506252 XP_005407799;XP_013361704;XP_013361705;XP_013361706 MODEL 9017900 pseudo LOC102026010 40S ribosomal protein S20 pseudogene NW_004955484 9634928 9635406 + 102026010 AGCD01058424 MODEL 8875990 protein-coding Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955429 18408121 18415832 + 102024260 AGCD01028902;AGCD01028903;GBDF01047104;XM_005387125;XM_005387126;XM_005387127;XM_005387128;XM_013515475;XR_001234519;XR_001234520 XP_005387182;XP_005387183;XP_005387184;XP_005387185;XP_013370929 MODEL 9060585 protein-coding Ptprc protein tyrosine phosphatase receptor type C ENCODES a protein that exhibits ankyrin binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN bleb (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955406 35005577 35127395 + 102002992 AGCD01006516;AGCD01006517;GBDI01007524;XM_013521946;XM_013521949;XM_013521953;XM_013521962;XM_013521970;XM_013521971 XP_013377400;XP_013377403;XP_013377407;XP_013377416;XP_013377424;XP_013377425 MODEL 8978856 ncrna LOC102024185 uncharacterized LOC102024185 NW_004955453 16940401 16952753 - 102024185 AGCD01044916;GBDJ01248425;XR_001236187 MODEL 8739383 ncrna LOC102007895 uncharacterized LOC102007895 NW_004955482 3978633 3990270 + 102007895 AGCD01057276;AGCD01057277;GBDI01191861;XR_263829 MODEL 9033470 pseudo LOC102025308 zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene NW_004955451 681864 682532 - 102025308 AGCD01042950 MODEL 8749915 protein-coding Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); centrosome localization (ortholog); microtubule cytoskeleton organization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); kinetochore (ortholog) NW_004955433 23262981 23286506 - 102022530 AGCD01031956;GBDF01090277;XM_005388471;XM_013516193;XM_013516194 XP_005388528;XP_013371647;XP_013371648 MODEL 39133346 snrna U4 U4 spliceosomal RNA 8825740 protein-coding F10 coagulation factor X ENCODES a protein that exhibits phospholipid binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of TOR signaling (ortholog); proteolysis (ortholog); zymogen activation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH aplastic anemia (ortholog); blood coagulation disease (ortholog); bone marrow disease (ortholog); FOUND IN serine-type endopeptidase complex (ortholog) NW_004955404 666142 682598 - 102011617 AGCD01003206;AGCD01003207;GBDF01240863;XM_005373972 XP_005374029 MODEL 8923188 protein-coding Dhdh dihydrodiol dehydrogenase ENCODES a protein that exhibits D-xylose 1-dehydrogenase (NADP+) activity (ortholog); galactose 1-dehydrogenase (NADP+) activity (ortholog); glucose 1-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN D-xylose catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955559 1706950 1719220 - 102028476 AGCD01073662;AGCD01073663;AGCD01073664;GBCQ01129279;XM_005412923 XP_005412980 MODEL 39133832 misc_rna 7SK 7SK RNA 8764323 protein-coding Emg1 EMG1 N1-specific pseudouridine methyltransferase ENCODES a protein that exhibits identical protein binding (ortholog); rRNA (pseudouridine) methyltransferase activity (ortholog); INVOLVED IN blastocyst development (ortholog); nucleologenesis (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Bowen-Conradi syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955413 4563864 4570809 + 102010240 AGCD01013621;GBDJ01228048;XM_005378851 XP_005378908 MODEL 10315929 ncrna LOC106147502 uncharacterized LOC106147502 NW_004955569 1128461 1130913 - 106147502 AGCD01074640;GBDF01074837;XR_001232429 MODEL 8946791 protein-coding Chst3 carbohydrate sulfotransferase 3 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); keratan sulfotransferase activity (ortholog); proteoglycan sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); peripheral nervous system axon regeneration (ortholog); response to axon injury (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Hip Dislocation (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955437 19563645 19605747 - 102003587 AGCD01034858;AGCD01034859;AGCD01034860;GBBH01057404;GBCE01122963;XM_005390020 XP_005390077 MODEL 9065153 protein-coding Camsap3 calmodulin regulated spectrin associated protein family member 3 ENCODES a protein that exhibits actin filament binding (ortholog); microtubule minus-end binding (ortholog); INVOLVED IN cilium movement (ortholog); embryo development ending in birth or egg hatching (ortholog); epithelial cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955563 1639369 1648826 - 102016207 AGCD01074154;AGCD01074155;GBCE01131503;GBDF01220733;XM_013509146 XP_013364600 MODEL 8845527 protein-coding Samd9l sterile alpha motif domain containing 9 like INVOLVED IN common myeloid progenitor cell proliferation (ortholog); endosomal vesicle fusion (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Ataxia (ortholog); FOUND IN early endosome (ortholog); mitochondrion (ortholog) NW_004955432 10007631 10028989 - 102007360 AGCD01030921;AGCD01030922;AGCD01030923;GBDK01230974;XM_005388027;XM_005388029;XM_013516048;XM_013516049;XM_013516050;XM_013516051 XP_005388084;XP_005388086;XP_013371502;XP_013371503;XP_013371504;XP_013371505 MODEL 9036953 protein-coding Bcl9 BCL9 transcription coactivator ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); myotube differentiation involved in skeletal muscle regeneration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955568 785361 866986 - 102013353 AGCD01074525;AGCD01074526;GBCE01104993;XM_005413460;XM_005413462;XM_005413463;XM_013509351 XP_005413517;XP_005413519;XP_005413520;XP_013364805 MODEL 8838553 protein-coding Polr3a RNA polymerase III subunit A ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); termination of RNA polymerase III transcription (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alacrima (ortholog); Ataxia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 14446059 14483336 + 102021175 AGCD01034672;AGCD01034673;GBDI01264392;XM_005389899 XP_005389956 MODEL 9058965 protein-coding Ipp intracisternal A particle-promoted polypeptide ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955464 12562824 12589976 + 102027054 AGCD01050207;AGCD01050208;AGCD01050209;AGCD01050210;GBBH01138930;GBDF01077438;XM_005398697;XM_013521582;XM_013521583 XP_005398754;XP_013377036;XP_013377037 MODEL 39131594 rrna 5S_rRNA 5S ribosomal RNA 8994049 protein-coding Sirt4 sirtuin 4 ENCODES a protein that exhibits lipoamidase activity (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein-cysteine ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); DNA damage response (ortholog); L-glutamine metabolic process (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955455 11322812 11334786 - 102013381 AGCD01045997;GBCB01086523;XM_005396513;XM_005396514 XP_005396570;XP_005396571 MODEL 8896414 pseudo LOC102009409 unconventional prefoldin RPB5 interactor 1 pseudogene NW_004955431 245211 246820 + 102009409 AGCD01029861 MODEL 39132463 rrna 5S_rRNA 5S ribosomal RNA 8816921 ncrna LOC102022139 uncharacterized LOC102022139 NW_004955448 1024522 1030655 - 102022139 AGCD01041248;GBDK01123674;XR_001235762;XR_001235763;XR_262452 MODEL 39132808 snorna SNORA63 Small nucleolar RNA SNORA63 8859786 protein-coding Egr1 early growth response 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to antibiotic (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN long term potentiation; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); aortic valve stenosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955418 2001509 2005269 - 102026526 AGCD01018737;GBBH01033334;GBBH01033337;XM_005382100 XP_005382157 MODEL 10265532 pseudo LOC106148591 protein FAM161A pseudogene NW_004955424 22149724 22150406 + 106148591 AGCD01024934 MODEL 39132469 rrna 5S_rRNA 5S ribosomal RNA 8812610 pseudo LOC102006737 acyl carrier protein, mitochondrial pseudogene NW_004955452 9572395 9574890 - 102006737 AGCD01044240 MODEL 8859943 protein-coding Lrtm1 leucine rich repeat transmembrane protein 1 INVOLVED IN positive regulation of synapse assembly (ortholog) NW_004955430 4784643 4794318 - 102006154 AGCD01029249;GBDI01251545;XM_005387378 XP_005387435 MODEL 9003407 protein-coding Rab31 RAB31, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); Golgi to plasma membrane protein transport (ortholog); Golgi vesicle transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); early phagosome membrane (ortholog) NW_004955402 2354399 2446537 - 102022140 AGCD01000076;AGCD01000077;AGCD01000078;AGCD01000079;GBDF01081715;XM_005372596;XM_013515338 XP_005372653;XP_013370792 MODEL 8821781 protein-coding Ccn3 cellular communication network factor 3 ENCODES a protein that exhibits hormone activity (ortholog); integrin binding (ortholog); Notch binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone regeneration (ortholog); cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); long QT syndrome (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955417 25218613 25225755 + 102006244 AGCD01018475;GBCB01111187;GBDI01264541;XM_005381909 XP_005381966 MODEL 39133347 snrna U4 U4 spliceosomal RNA 39133834 misc_rna 7SK 7SK RNA 8721816 protein-coding LOC102013050 homeobox protein Hox-A4-like NW_004955407 36080940 36082388 - 102013050 AGCD01007755;GBCQ01047171;XM_013504651 XP_013360105 MODEL 9015159 protein-coding LOC102011373 zinc finger protein 664-like NW_004955569 341373 356350 + 102011373 AGCD01074574;AGCD01074575;XM_005413508 XP_005413565 MODEL 8912587 protein-coding LOC102006372 olfactory receptor 13G1-like NW_004955507 6393509 6394453 + 102006372 AGCD01065713;XM_005407722 XP_005407779 MODEL 8959545 protein-coding Xrn2 5'-3' exoribonuclease 2 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); identical protein binding (ortholog); INVOLVED IN hippocampus development (ortholog); neuron differentiation (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; ribosome biogenesis pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955415 29107060 29175374 + 102023586 AGCD01016647;AGCD01016648;AGCD01016649;GBDF01082246;XM_005380952 XP_005381009 MODEL 8974071 protein-coding Foxs1 forkhead box S1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blood vessel development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuromuscular process controlling balance (ortholog); FOUND IN nucleus (ortholog) NW_004955422 29132325 29133641 + 102013732 AGCD01023379;GBDI01310335;XM_005384885 XP_005384942 MODEL 8760565 ncrna LOC102012659 uncharacterized LOC102012659 NW_004955422 126981 128331 + 102012659 AGCD01022394;GBDF01161749;XR_260841 MODEL 9036726 protein-coding Camta1 calmodulin binding transcription activator 1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN neuromuscular process controlling balance (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Arnold-Chiari Malformation (ortholog); astigmatism (ortholog); autistic disorder (ortholog) NW_004955486 5115469 5890028 - 102005940 AGCD01059076;AGCD01059077;AGCD01059078;AGCD01059079;AGCD01059080;AGCD01059081;AGCD01059082;AGCD01059083;AGCD01059084;AGCD01059085;AGCD01059086;AGCD01059087;AGCD01059088;AGCD01059089;AGCD01059090;AGCD01059091;AGCD01059092;AGCD01059093;GBBH01123896;XM_005404071;XM_005404072;XM_005404073 XP_005404128;XP_005404129;XP_005404130 MODEL 8807154 ncrna LOC102029945 uncharacterized LOC102029945 NW_004955410 11493132 11494976 + 102029945 AGCD01010825;GBDF01080397;XR_259836 MODEL 8864182 protein-coding Ppp1r21 protein phosphatase 1 regulatory subunit 21 ENCODES a protein that exhibits mRNA binding (ortholog); protein-macromolecule adaptor activity (ortholog); RNA binding (ortholog); INVOLVED IN regulation of intracellular mRNA localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955441 15002126 15061967 + 102018988 AGCD01037238;AGCD01037239;AGCD01037240;AGCD01037241;GBDI01081035;XM_013517520 XP_013372974 MODEL 730469049 snorna SNORD74 Small nucleolar RNA SNORD74 8912072 pseudo LOC102018795 aldose reductase-related protein 2 pseudogene NW_004955404 10139110 10140052 + 102018795 AGCD01003376 MODEL 8853880 protein-coding CUNH11orf91 chromosome unknown C11orf91 homolog NW_004955422 12536515 12539332 + 102021136 AGCD01022796;GBDF01043279;XM_005384157 XP_005384214 MODEL 8727518 protein-coding Tlcd5 TLC domain containing 5 ASSOCIATED WITH exfoliation syndrome (ortholog); melanoma (ortholog) NW_004955412 21344464 21350675 + 102011421 AGCD01013021;GBCE01163283;XM_005378348;XM_005378349;XM_005378350 XP_005378405;XP_005378406;XP_005378407 MODEL 8861340 pseudo LOC102005312 uncharacterized LOC102005312 NW_004955443 13092892 13167982 + 102005312 AGCD01038462;AGCD01038463;AGCD01038464 MODEL 8891478 protein-coding Rars1 arginyl-tRNA synthetase 1 ENCODES a protein that exhibits arginine binding (ortholog); arginine-tRNA ligase activity (ortholog); ATP binding (ortholog); INVOLVED IN arginyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 21536426 21574683 + 102011958 AGCD01008554;AGCD01008555;GBDI01169815;XM_005376302 XP_005376359 MODEL 8720398 protein-coding LOC102007896 olfactory receptor 1J1-like NW_004955419 5455988 5456929 + 102007896 AGCD01019810;XM_005382528 XP_005382585 MODEL 8964625 protein-coding LOC102005646 zinc finger protein 136-like NW_004955569 1261038 1282057 - 102005646 AGCD01074645;GBDI01011361;XM_005413498;XM_013509376 XP_005413555;XP_013364830 MODEL 8914094 protein-coding Sirt5 sirtuin 5 ENCODES a protein that exhibits NAD+ binding (ortholog); protein-glutaryllysine deglutarylase activity (ortholog); protein-malonyllysine demalonylase activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); negative regulation of reactive oxygen species metabolic process (ortholog); regulation of ketone biosynthetic process (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955465 1129217 1167604 - 102011419 AGCD01050331;AGCD01050332;AGCD01050333;AGCD01050334;AGCD01050335;AGCD01050336;GBDJ01185808;XM_005398799 XP_005398856 MODEL 8831386 protein-coding Rho rhodopsin ENCODES a protein that exhibits retinal binding (ortholog); spectrin binding (ortholog); INVOLVED IN absorption of visible light (ortholog); cellular response to light stimulus (ortholog); detection of light stimulus (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH blindness (ortholog); cataract (ortholog); Coats disease (ortholog); FOUND IN cell-cell junction (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955429 17787337 17791982 - 102012673 AGCD01028867;GBBH01131777;XM_005387085 XP_005387142 MODEL 39134388 misc_rna 7SK 7SK RNA 8980698 protein-coding Slc25a14 solute carrier family 25 member 14 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); regulation of cellular response to oxidative stress (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrial envelope (ortholog); mitochondrion (ortholog) NW_004955473 4697901 4731688 - 102007006 AGCD01053957;GBCE01089348;XM_005401236;XM_005401237;XM_005401238;XM_005401239;XM_013523087;XM_013523088 XP_005401293;XP_005401294;XP_005401295;XP_005401296;XP_013378541;XP_013378542 MODEL 10323086 ncrna LOC106148592 uncharacterized LOC106148592 NW_004955403 56403011 56409610 - 106148592 AGCD01003134;GBDF01040662;XR_001234184 MODEL 9022719 pseudo LOC102006739 40S ribosomal protein S4, X isoform-like NW_004955453 3829718 3830520 + 102006739 AGCD01044669 MODEL 9035886 protein-coding LOC102003851 olfactory receptor 150-like NW_004955412 24925251 24928447 + 102003851 AGCD01013131;XM_005378411 XP_005378468 MODEL 8774905 protein-coding Tapbp TAP binding protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); peptide antigen binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent (ortholog); defense response (ortholog); MHC class I protein complex assembly (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); MHC class I deficiency (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); MHC class I peptide loading complex (ortholog) NW_004955437 1860057 1865645 - 102003584 AGCD01034240;GBDI01163633;GBDK01008349;XM_005389485 XP_005389542 MODEL 8708859 protein-coding Emid1 EMI domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); Golgi apparatus (ortholog) NW_004955455 3514350 3564584 + 102027713 AGCD01045632;AGCD01045633;AGCD01045634;AGCD01045635;AGCD01045636;GBBH01172676;GBDI01170247;XM_005396178;XM_005396179;XM_005396180;XM_005396181;XM_005396182;XM_005396188 XP_005396235;XP_005396236;XP_005396237;XP_005396238;XP_005396239;XP_005396245 MODEL 9001794 protein-coding Bcl9l BCL9 like ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); positive regulation of epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955412 20029988 20059057 - 102018906 AGCD01012992;GBDI01119157;XM_005378276;XM_005378277;XM_005378278;XM_005378280;XM_005378281;XM_013511109;XM_013511110 XP_005378333;XP_005378334;XP_005378335;XP_005378337;XP_005378338;XP_013366563;XP_013366564 MODEL 8754963 protein-coding Ptprcap protein tyrosine phosphatase receptor type C associated protein FOUND IN plasma membrane (ortholog) NW_004955422 18041094 18043687 + 102017463 AGCD01022936;GBDK01171715;XM_005384326 XP_005384383 MODEL 8803800 protein-coding LOC102024186 cytochrome P450 11B2, mitochondrial-like NW_004955454 1627309 1662347 + 102024186 AGCD01044977;XM_013520011 XP_013375465 MODEL 8942528 protein-coding Ippk inositol-pentakisphosphate 2-kinase ENCODES a protein that exhibits inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955515 5170164 5219130 + 102029103 AGCD01067342;AGCD01067343;GBDJ01189661;XM_005408913;XM_005408914;XM_013506872 XP_005408970;XP_005408971;XP_013362326 MODEL 8764122 protein-coding Ppp1r26 protein phosphatase 1 regulatory subunit 26 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955513 4039819 4046482 + 102029316 AGCD01066914;GBCE01037443;XM_005408477;XM_005408478 XP_005408534;XP_005408535 MODEL 8982202 pseudo LOC102003512 60S ribosomal protein L17-like NW_004955405 31689835 31691569 + 102003512 AGCD01005302 MODEL 8766272 protein-coding Armh2 armadillo like helical domain containing 2 NW_004955483 2271132 2273986 + 102007897 AGCD01057673;GBDF01085007;XM_005403358 XP_005403415 MODEL 8794239 ncrna LOC102018796 uncharacterized LOC102018796 NW_004955405 8543243 8547181 - 102018796 AGCD01004747;GBDF01238909;XR_259364 MODEL 8889132 protein-coding Tspan6 tetraspanin 6 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog) NW_004955503 6782264 6788533 - 102020466 AGCD01064769;AGCD01064770;GBBH01229992;XM_005406932 XP_005406989 MODEL 8768992 protein-coding Dhfr dihydrofolate reductase ENCODES a protein that exhibits dihydrofolate reductase activity (ortholog); dihydrofolic acid binding (ortholog); folate reductase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); axon regeneration (ortholog); dihydrofolate metabolic process (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; dopa responsive dystonia pathway; folate cycle metabolic pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955418 29274170 29283028 + 102014049 AGCD01019455;GBCE01039261;XM_005382314 XP_005382371 MODEL 10288535 ncrna LOC106147503 uncharacterized LOC106147503 NW_004955570 1633402 1639631 + 106147503 AGCD01074820;GBDK01096877;XR_001232430 MODEL 8850330 ncrna LOC102026011 uncharacterized LOC102026011 NW_004955489 2649612 2673929 + 102026011 AGCD01059875;GBDJ01247666;XR_264016 MODEL 39133836 misc_rna 7SK 7SK RNA 8937340 protein-coding Cpd carboxypeptidase D ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); protein phosphatase 2A binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to interleukin-2 (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955481 2885243 2951574 - 102003131 AGCD01056887;AGCD01056888;AGCD01056889;AGCD01056890;AGCD01056891;GBBH01087971;GBCQ01037241;XM_005402656;XM_013503460 XP_005402713;XP_013358914 MODEL 8730871 ncrna LOC102013053 uncharacterized LOC102013053 NW_004955456 10144425 10145561 + 102013053 AGCD01046518;GBDF01025520;XR_262893 MODEL 9039599 protein-coding LOC102010591 acyl-CoA desaturase 1 NW_004955485 9758703 9773277 + 102010591 AGCD01058780;GBDK01014034;XM_005403913 XP_005403970 MODEL 8937212 ncrna LOC102025311 uncharacterized LOC102025311 NW_004955731 721 6575 - 102025311 AGCD01078225;GBDJ01142499;XR_001232594 MODEL 8896472 protein-coding LOC102011379 histone H2B type 1-B-like NW_004955581 88920 89732 + 102011379 AGCD01075657;XM_005414228 XP_005414285 MODEL 8819100 protein-coding Fpgs folylpolyglutamate synthase ENCODES a protein that exhibits tetrahydrofolylpolyglutamate synthase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell population proliferation (ortholog); glycine metabolic process (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial inner membrane (ortholog) NW_004955419 853891 871729 - 102025244 AGCD01019617;AGCD01019618;AGCD01019619;GBDF01187482;XM_005382406;XM_013513168;XM_013513169;XM_013513170;XM_013513171 XP_005382463;XP_013368622;XP_013368623;XP_013368624;XP_013368625 MODEL 9004629 protein-coding Dync2h1 dynein cytoplasmic 2 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); coronary vasculature development (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular dysplasia 10 (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955412 6267726 6518888 + 102013071 AGCD01012671;AGCD01012672;AGCD01012673;AGCD01012674;AGCD01012675;GBCE01156315;GBCE01171445;XM_013511077 XP_013366531 MODEL 8973255 protein-coding F11 coagulation factor XI ENCODES a protein that exhibits identical protein binding (ortholog); serine-type aminopeptidase activity (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); plasminogen activation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Apnea (ortholog); Bradycardia (ortholog); central sleep apnea (ortholog); FOUND IN extracellular region (ortholog); serine-type endopeptidase complex (ortholog) NW_004955403 22811211 22830281 - 102016869 AGCD01002231;GBDJ01168243;XM_005373429;XM_005373430 XP_005373486;XP_005373487 MODEL 9031418 protein-coding Egr2 early growth response 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aorta development (ortholog); brain segmentation (ortholog); facial nerve structural organization (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955425 16055748 16068429 - 102023171 AGCD01025594;GBDK01360900;XM_005385956;XM_013514884;XM_013514885 XP_005386013;XP_013370338;XP_013370339 MODEL 9002026 protein-coding LOC102025314 keratin-associated protein 4-7-like NW_004955451 15520664 15521510 - 102025314 AGCD01043612;AGCD01043613;XM_013519127 XP_013374581 MODEL 8717240 protein-coding Iqank1 IQ motif and ankyrin repeat containing 1 ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955454 2427621 2461556 + 102011174 AGCD01045020;AGCD01045021;GBCE01142105;XM_005395804;XM_005395805;XM_005395806;XM_013520055;XM_013520056;XM_013520057 XP_005395861;XP_005395862;XP_005395863;XP_013375509;XP_013375510;XP_013375511 MODEL 8821022 pseudo LOC102007900 la-related protein 7-like NW_004955419 25039993 25040565 - 102007900 AGCD01020367 MODEL 39133348 snrna U4 U4 spliceosomal RNA 8855751 protein-coding Ppp1r27 protein phosphatase 1 regulatory subunit 27 ENCODES a protein that exhibits phosphatase binding (ortholog); ASSOCIATED WITH thymoma (ortholog) NW_004955506 1327073 1328187 + 102026238 AGCD01065256;GBCB01002479;XM_005407253;XM_005407254 XP_005407310;XP_005407311 MODEL 8713794 pseudo LOC102003513 UDP-glucuronosyltransferase 1-8-like NW_004955453 2600059 2624326 - 102003513 AGCD01044634 MODEL 39131595 rrna 5S_rRNA 5S ribosomal RNA 9030869 protein-coding Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ENCODES a protein that exhibits deoxynucleoside triphosphate hydrolase activity (ortholog); dGTP binding (ortholog); dGTPase activity (ortholog); INVOLVED IN dATP catabolic process (ortholog); defense response to virus (ortholog); deoxyribonucleotide catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 5 (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 24714103 24780672 + 102028206 AGCD01023230;AGCD01023231;AGCD01023232;AGCD01023233;AGCD01023234;AGCD01023235;GBBH01005982;GBDF01177065;XM_013514015 XP_013369469 MODEL 39132805 snorna SNORA63 Small nucleolar RNA SNORA63 8885451 ncrna LOC102006744 uncharacterized LOC102006744 NW_004955408 16899632 16911435 - 102006744 AGCD01008448;GBBH01062027;XR_001232354 MODEL 8820415 protein-coding Slc25a15 solute carrier family 25 member 15 ENCODES a protein that exhibits antiporter activity (ortholog); arginine:ornithine antiporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); INVOLVED IN L-arginine transmembrane transport (ortholog); L-lysine transmembrane transport (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Breast Cancer, Familial (ortholog); citrullinemia (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955431 5673207 5691615 - 102012116 AGCD01030038;GBCQ01031607;GBDF01083462;XM_013515895 XP_013371349 MODEL 8920890 ncrna LOC102012660 uncharacterized LOC102012660 NW_004955422 11202376 11214424 - 102012660 AGCD01022751;GBDF01159067;XR_260856;XR_260857 MODEL 9046294 protein-coding LOC102022141 histone H2A type 1-D ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN nucleosome disassembly (ortholog); UV-damage excision repair (ortholog); FOUND IN nucleoplasm (ortholog); nucleosome (ortholog) NW_004955581 93494 100249 + 102022141 AGCD01075657;GBDF01114770;XM_013509722 XP_013365176 MODEL 9048829 protein-coding Camta2 calmodulin binding transcription activator 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cardiac muscle hypertrophy in response to stress (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955467 10375017 10391546 - 102022581 AGCD01051561;AGCD01051562;GBBH01118707;XM_005399625;XM_005399626;XM_005399628;XM_005399629;XM_005399630;XM_013522075;XM_013522076 XP_005399682;XP_005399683;XP_005399685;XP_005399686;XP_005399687;XP_013377529;XP_013377530 MODEL 8782805 gene LOC102010596 T-cell receptor beta-1 chain C region-like NW_004955494 1000095 1115539 - 102010596 AGCD01061390;AGCD01061391;XM_005405393 MODEL 8702945 pseudo LOC102005316 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial pseudogene NW_004955445 11834175 11839386 - 102005316 AGCD01039717;XM_005392425 MODEL 8847647 protein-coding Bclaf1 BCL2 associated transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955439 608849 641005 + 102023745 AGCD01035590;AGCD01035591;GBDF01118482;XM_005390473;XM_005390474;XM_005390475;XM_005390476;XM_005390477;XM_005390478;XM_005390479;XM_013517364;XM_013517365 XP_005390530;XP_005390531;XP_005390532;XP_005390533;XP_005390534;XP_005390535;XP_005390536;XP_013372818;XP_013372819 MODEL 9023876 protein-coding Rars2 arginyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits arginine-tRNA ligase activity (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955411 14470479 14527895 - 102028171 AGCD01011920;AGCD01011921;GBDJ01276669;XM_005377731 XP_005377788 MODEL 8945466 protein-coding Ddn dendrin ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955500 7828759 7833397 - 102028559 AGCD01063951;AGCD01063952;GBCQ01030325;XM_013505680;XM_013505681 XP_013361134;XP_013361135 MODEL 10281399 protein-coding CUNH11orf97 chromosome unknown C11orf97 homolog INVOLVED IN cilium assembly (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog) NW_004955605 411307 421934 - 106147638 AGCD01076946;GBBH01166937;XM_013510106 XP_013365560 MODEL 39134389 misc_rna 7SK 7SK RNA 8991169 protein-coding Polr3b RNA polymerase III subunit B ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); snRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); amblyopia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955405 40353289 40451445 + 102021939 AGCD01005515;AGCD01005516;AGCD01005517;GBDF01078628;XM_005374620;XM_013519054 XP_005374677;XP_013374508 MODEL 9062925 pseudo LOC102009413 protein PBDC1 pseudogene NW_004955433 10564178 10564675 + 102009413 AGCD01031632 MODEL 8734060 pseudo LOC102005317 tubulin alpha-1C chain-like NW_004955569 1268620 1269973 + 102005317 AGCD01074645 MODEL 9035015 pseudo LOC102025316 cyclic AMP-dependent transcription factor ATF-2 pseudogene NW_004955404 32070084 32076574 + 102025316 AGCD01004032 MODEL 8842102 protein-coding LOC102003853 myosin-3 ENCODES a protein that exhibits actin filament binding (ortholog); ATP hydrolysis activity (ortholog); microfilament motor activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN contractile muscle fiber (ortholog); myosin complex (ortholog) NW_004955467 6561609 6583228 + 102003853 AGCD01051416;AGCD01051417;GBDF01285104;XM_005399362 XP_005399419 MODEL 8801985 protein-coding Xrra1 X-ray radiation resistance associated 1 INVOLVED IN response to X-ray (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955414 16825118 16893518 + 102004057 AGCD01015225;AGCD01015226;AGCD01015227;GBDF01005769;XM_005379906;XM_005379907;XM_005379909;XM_013511844 XP_005379963;XP_005379964;XP_005379966;XP_013367298 MODEL 8981091 protein-coding Emilin1 elastin microfibril interfacer 1 ENCODES a protein that exhibits extracellular matrix constituent conferring elasticity (ortholog); identical protein binding (ortholog); integrin binding involved in cell-matrix adhesion (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cell adhesion mediated by integrin (ortholog); cell migration (ortholog); ASSOCIATED WITH arterial tortuosity syndrome (ortholog); ARTERIAL TORTUOSITY-BONE FRAGILITY SYNDROME (ortholog); autosomal dominant distal hereditary motor neuronopathy 10 (ortholog); FOUND IN EMILIN complex (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955469 9049666 9057692 + 102019051 AGCD01052488;GBCE01031448;XM_005400450 XP_005400507 MODEL 8785566 ncrna LOC102029947 uncharacterized LOC102029947 NW_004955410 28791107 28794791 + 102029947 AGCD01011259;GBCQ01067608;XR_259876 MODEL 9056307 protein-coding Ppp1r35 protein phosphatase 1 regulatory subunit 35 INVOLVED IN notochord morphogenesis (ortholog); positive regulation of centriole elongation (ortholog); positive regulation of cilium assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955573 523512 524979 + 102010428 AGCD01074988;AGCD01074989;GBBH01065691;GBDF01134060;XM_013509474 XP_013364928 MODEL 39133838 misc_rna 7SK 7SK RNA 39132476 rrna 5S_rRNA 5S ribosomal RNA 8849395 pseudo LOC102024188 biogenesis of lysosome-related organelles complex 1 subunit 1 pseudogene NW_004955454 2557743 2558120 + 102024188 AGCD01045023;XM_005396109 MODEL 8908392 pseudo LOC102011382 ubiquitin carboxyl-terminal hydrolase 1 pseudogene NW_004955402 52962185 52963700 + 102011382 AGCD01001352 MODEL 8887584 protein-coding Lrtm2 leucine rich repeat transmembrane protein 2 INVOLVED IN positive regulation of synapse assembly (ortholog) NW_004955454 4355698 4372041 + 102026184 AGCD01045121;GBDI01358360;XM_005395955;XM_013520229;XM_013520230;XM_013520231;XM_013520232;XM_013520233 XP_005396012;XP_013375683;XP_013375684;XP_013375685;XP_013375686;XP_013375687 MODEL 8835678 protein-coding Tldc2 TBC/LysM-associated domain containing 2 INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955422 24781476 24795112 - 102018842 AGCD01023235;AGCD01023236;GBBH01208237;XM_005384726;XM_013514016;XM_013514017;XM_013514018;XM_013514020 XP_005384783;XP_013369470;XP_013369471;XP_013369472;XP_013369474 MODEL 8703550 ncrna LOC102005651 uncharacterized LOC102005651 NW_004955449 5758290 5762221 + 102005651 AGCD01041942;XR_262490 MODEL 8764212 protein-coding Rab32 RAB32, member RAS oncogene family ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); endosome to melanosome transport (ortholog); melanosome assembly (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN early endosome (ortholog); early endosome lumen (ortholog); endoplasmic reticulum (ortholog) NW_004955436 14171123 14177255 - 102005504 AGCD01033868;GBCC01045894;GBCQ01062627;XM_013516677 XP_013372131 MODEL 8748072 protein-coding Fpgt fucose-1-phosphate guanylyltransferase ENCODES a protein that exhibits fucose-1-phosphate guanylyltransferase activity (ortholog); INVOLVED IN GDP-L-fucose salvage (ortholog); L-fucose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH renal cell carcinoma (ortholog) NW_004955423 18430520 18438760 - 102029759 AGCD01023873;GBDF01305242;XM_005385241 XP_005385298 MODEL 8791703 protein-coding Dync2i1 dynein 2 intermediate chain 1 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); embryonic skeletal system morphogenesis (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); Apnea (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); cilium (ortholog) NW_004955579 1056291 1124623 + 102006724 AGCD01075565;AGCD01075566;AGCD01075567;AGCD01075568;AGCD01075569;AGCD01075570;GBBH01208310;GBDI01257019;XM_013509671 XP_013365125 MODEL 39132477 rrna 5S_rRNA 5S ribosomal RNA 8933341 pseudo LOC102018802 UMP-CMP kinase pseudogene NW_004955407 36136514 36150095 + 102018802 AGCD01007758;AGCD01007759 MODEL 8916483 protein-coding Cand1 cullin associated and neddylation dissociated 1 ENCODES a protein that exhibits TBP-class protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of RNA polymerase II transcription preinitiation complex assembly (ortholog); PARTICIPATES IN neddylation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955458 13815819 13850007 + 102026947 AGCD01047814;GBBH01119800;GBDF01281171;XM_005397463 XP_005397520 MODEL 8805685 protein-coding LOC102006374 olfactory receptor 5AL1-like NW_004955511 1550026 1550967 + 102006374 AGCD01066371;XM_005407965 XP_005408022 MODEL 8778672 protein-coding Armh3 armadillo like helical domain containing 3 INVOLVED IN cGAS/STING signaling pathway (ortholog); establishment of protein localization (ortholog); Golgi to endosome transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955485 8297785 8453165 + 102024117 AGCD01058709;AGCD01058710;AGCD01058711;AGCD01058712;GBBH01150382;GBDF01089675;XM_013504087 XP_013359541 MODEL 8924753 pseudo LOC102026012 dnaJ homolog subfamily B member 6-like NW_004955490 4325803 4326491 - 102026012 AGCD01060187 MODEL 8732879 protein-coding Tspan7 tetraspanin 7 INVOLVED IN axonogenesis (ortholog); collateral sprouting (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); Dwarfism (ortholog); FOUND IN postsynapse (ortholog) NW_004955566 75576 203512 + 102007825 AGCD01074344;GBBH01119190;XM_005413275 XP_005413332 MODEL 9059451 protein-coding Tapbpl TAP binding protein like ENCODES a protein that exhibits MHC class I protein complex binding (ortholog); INVOLVED IN negative regulation of antigen processing and presentation of peptide antigen via MHC class I (ortholog); peptide antigen assembly with MHC class I protein complex (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi membrane (ortholog) NW_004955413 4108044 4116413 + 102019490 AGCD01013600;GBDK01069809;XM_005378785;XM_005378786;XM_005378787;XM_013511329 XP_005378842;XP_005378843;XP_005378844;XP_013366783 MODEL 9066269 protein-coding Dhodh dihydroorotate dehydrogenase (quinone) ENCODES a protein that exhibits dihydroorotate dehydrogenase (quinone) activity (ortholog); dihydroorotate dehydrogenase activity (ortholog); FMN binding (ortholog); INVOLVED IN 'de novo' CTP biosynthetic process (ortholog); 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); 'de novo' UMP biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH beta thalassemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955484 4699743 4713466 + 102017238 AGCD01058230;GBDJ01191379;XM_005403527 XP_005403584 MODEL 9025194 protein-coding Iqcb1 IQ motif containing B1 ENCODES a protein that exhibits BBSome binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN cilium assembly (ortholog); cytosolic ciliogenesis (ortholog); maintenance of animal organ identity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); photoreceptor connecting cilium (ortholog) NW_004955427 21120012 21171838 - 102007450 AGCD01027432;GBDF01126511;XM_013515101;XM_013515102;XM_013515103 XP_013370555;XP_013370556;XP_013370557 MODEL 730469196 snorna SNORD74 Small nucleolar RNA SNORD74 8747588 pseudo LOC102009415 cell division cycle and apoptosis regulator protein 1 pseudogene NW_004955434 8711959 8714535 + 102009415 AGCD01032265 MODEL 8863175 protein-coding Ptprd protein tyrosine phosphatase receptor type D ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); heterophilic cell-cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); presynaptic membrane (ortholog) NW_004955434 12033825 14132636 - 102009647 AGCD01032383;AGCD01032384;AGCD01032385;AGCD01032386;AGCD01032387;AGCD01032388;AGCD01032389;AGCD01032390;AGCD01032391;AGCD01032392;AGCD01032393;AGCD01032394;AGCD01032395;AGCD01032396;AGCD01032397;AGCD01032398;AGCD01032399;AGCD01032400;AGCD01032401;AGCD01032402;AGCD01032403;AGCD01032404;AGCD01032405;AGCD01032406;AGCD01032407;AGCD01032408;AGCD01032409;AGCD01032410;AGCD01032411;AGCD01032412;AGCD01032413;AGCD01032414;AGCD01032415;AGCD01032416;AGCD01032417;AGCD01032418;GBBH01036507;XM_013516328;XM_013516329;XM_013516330;XM_013516331;XM_013516332;XM_013516333;XM_013516334;XM_013516335;XM_013516336;XM_013516337 XP_013371782;XP_013371783;XP_013371784;XP_013371785;XP_013371786;XP_013371787;XP_013371788;XP_013371789;XP_013371790;XP_013371791 MODEL 8779964 protein-coding Cpe carboxypeptidase E ENCODES a protein that exhibits carboxypeptidase activity (ortholog); cell adhesion molecule binding (ortholog); cobalt ion binding (ortholog); INVOLVED IN cardiac left ventricle morphogenesis (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH alcohol dependence (ortholog); atherosclerosis (ortholog); BDV Syndrome (ortholog); FOUND IN dendrite (ortholog); dense core granule (ortholog); extracellular region (ortholog) NW_004955403 39862893 39971902 - 102012049 AGCD01002649;AGCD01002650;AGCD01002651;AGCD01002652;GBBH01139891;GBDI01001661;XM_005373897 XP_005373954 MODEL 8805780 protein-coding Rhoa ras homolog family member A ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); alpha-beta T cell lineage commitment (ortholog); androgen receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; E-cadherin signaling pathway; eicosanoid signaling pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acute myocardial infarction (ortholog); alopecia (ortholog); FOUND IN apical junction complex (ortholog); axon (ortholog); cell cortex (ortholog) NW_004955532 1300821 1347453 - 102012473 AGCD01070177;AGCD01070178;AGCD01070179;GBDF01010839;XM_005410198;XM_005410200 XP_005410255;XP_005410257 MODEL 10289171 pseudo LOC106148593 probable N-acetyltransferase CML3 NW_004955424 12008552 12009229 + 106148593 AGCD01024588 MODEL 9063399 protein-coding F11r F11 receptor ENCODES a protein that exhibits integrin binding (ortholog); PDZ domain binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); cell adhesion (ortholog); cell differentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atherosclerosis (ortholog); breast cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955468 12764968 12785956 - 102023683 AGCD01052186;AGCD01052187;GBBH01000819;XM_005400228;XM_013522519 XP_005400285;XP_013377973 MODEL 8734292 ncrna LOC102011385 uncharacterized LOC102011385 NW_004955403 10477798 10481600 + 102011385 AGCD01001922;GBDF01013779;XR_259170 MODEL 8762046 ncrna LOC102007901 uncharacterized LOC102007901 NW_004955485 9441277 9448021 + 102007901 AGCD01058766;GBDF01017147;XR_263934;XR_263935 MODEL 10213477 ncrna LOC106147504 uncharacterized LOC106147504 NW_004955570 1497324 1502789 - 106147504 AGCD01074815;GBDF01126186;XR_001232431 MODEL 39133349 snrna U4 U4 spliceosomal RNA 8823950 protein-coding Rasa1 RAS p21 protein activator 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); GTPase binding (ortholog); kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); angiogenesis (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arteriovenous malformation (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955418 23807740 23897699 - 102008221 AGCD01019313;AGCD01019314;GBDI01008697;GBDK01184895;XM_005382300 XP_005382357 MODEL 9055617 protein-coding Rab33a RAB33A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955473 4875230 4891898 - 102009493 AGCD01053961;AGCD01053962;GBDJ01147195;XM_005401246;XM_005401247 XP_005401303;XP_005401304 MODEL 39132811 snorna SNORA63 Small nucleolar RNA SNORA63 8821253 pseudo LOC102013054 nuclear inhibitor of protein phosphatase 1-like NW_004955407 28446035 28447589 + 102013054 AGCD01007586 MODEL 8705314 protein-coding Samm50 SAMM50 sorting and assembly machinery component INVOLVED IN cristae formation (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955413 28901124 28925093 + 102020647 AGCD01014572;GBDF01046690;XM_005379452 XP_005379509 MODEL 8845654 protein-coding Chst4 carbohydrate sulfotransferase 4 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN leukocyte tethering or rolling (ortholog); N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); melanoma (ortholog); FOUND IN Golgi membrane (ortholog); trans-Golgi network (ortholog) NW_004955484 4234677 4245092 + 102010590 AGCD01058206;GBBH01126644;XM_005403503;XM_005403504;XM_005403507;XM_013503843;XM_013503844;XM_013503845 XP_005403560;XP_005403561;XP_005403564;XP_013359297;XP_013359298;XP_013359299 MODEL 8828498 protein-coding Slc25a16 solute carrier family 25 member 16 ENCODES a protein that exhibits coenzyme A transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN coenzyme A transport (ortholog); mitochondrial coenzyme A transmembrane transport (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 16 (ortholog); Breast Cancer, Familial (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955425 20705758 20739692 - 102023054 AGCD01025754;AGCD01025755;AGCD01025756;AGCD01025757;GBCQ01100435;XM_005386098 XP_005386155 MODEL 8767813 protein-coding Emilin2 elastin microfibril interfacer 2 INVOLVED IN negative regulation of cell migration (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN EMILIN complex (ortholog); extracellular region (ortholog) NW_004955402 7507674 7519978 - 102016008 AGCD01000175;AGCD01000176;GBDF01025495;GBDI01175041;XM_013518815 XP_013374269 MODEL 9057027 protein-coding LOC102012661 solute carrier family 23 member 1-like NW_004955494 7357079 7405398 + 102012661 AGCD01061551;AGCD01061552;GBDI01178715;XM_005405484;XM_005405485;XM_005405486;XM_013504941;XM_013504942;XM_013504943;XM_013504944 XP_005405541;XP_005405542;XP_005405543;XP_013360395;XP_013360396;XP_013360397;XP_013360398 MODEL 8860233 protein-coding Ccn4 cellular communication network factor 4 INVOLVED IN bone development (ortholog); glucose homeostasis (ortholog); negative regulation of chondrocyte differentiation (ortholog); ASSOCIATED WITH Airway Remodeling (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955461 7748399 7780359 + 102015386 AGCD01048922;GBDF01027727;XM_005398024;XM_005398025;XM_013521349 XP_005398081;XP_005398082;XP_013376803 MODEL 8763089 protein-coding Ppp1r36 protein phosphatase 1 regulatory subunit 36 ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog) NW_004955466 5312602 5339402 - 102017969 AGCD01050873;AGCD01050874;AGCD01050875;GBDF01176713;XM_013521899;XM_013521900;XM_013521901 XP_013377353;XP_013377354;XP_013377355 MODEL 9035323 protein-coding Sirt6 sirtuin 6 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cardiac muscle cell differentiation (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); Cardiotoxicity (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, subtelomeric region (ortholog) NW_004955495 4641883 4650518 + 102011999 AGCD01061938;GBDI01262314;XM_013505251;XM_013505252 XP_013360705;XP_013360706 MODEL 8979708 protein-coding Tspan8 tetraspanin 8 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN negative regulation of blood coagulation (ortholog); regulation of gene expression (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Arterial Occlusive Diseases (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955405 11200290 11233094 - 102030592 AGCD01004827;GBBH01001841;XM_005374318 XP_005374375 MODEL 8825814 protein-coding Egr3 early growth response 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); ASSOCIATED WITH Ataxia (ortholog); COVID-19 (ortholog); thymoma (ortholog) NW_004955403 46105447 46108149 - 102014312 AGCD01002849;GBDF01192293;XM_005373688 XP_005373745 MODEL 8905081 pseudo LOC102010598 60S ribosomal protein L7-like 1 pseudogene NW_004955494 4924654 4934243 - 102010598 AGCD01061515 MODEL 8932824 protein-coding Lrtm3 leucine rich repeat transmembrane protein 3 ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955404 8401713 8425519 + 102018151 AGCD01003352;AGCD01003353;GBDF01148279;XM_013516846 XP_013372300 MODEL 39131349 protein-coding DDN dendrin 8832104 protein-coding Bclaf3 BCLAF1 and THRAP3 family member 3 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); positive regulation of stem cell population maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955509 383083 435163 - 102004624 AGCD01065931;AGCD01065932;GBDK01028165;XM_005407799;XM_005407800;XM_005407801;XM_013506297;XM_013506298;XM_013506299 XP_005407856;XP_005407857;XP_005407858;XP_013361751;XP_013361752;XP_013361753 MODEL 10227157 protein-coding CUNH11orf98 chromosome unknown C11orf98 homolog INVOLVED IN positive regulation of sister chromatid cohesion (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955599 546973 548685 + 106147623 AGCD01076658;GBDF01088651;XM_013510069 XP_013365523 MODEL 8923205 ncrna LOC102003516 uncharacterized LOC102003516 NW_004955456 14326450 14331839 - 102003516 AGCD01046639;GBBH01024435;XR_001236348;XR_262903 MODEL 8735335 ncrna LOC102025323 uncharacterized LOC102025323 NW_004955456 3093732 3094240 + 102025323 AGCD01046263;XR_262875 MODEL 9052302 pseudo LOC102022146 uncharacterized LOC102022146 NW_004955402 16988675 17054385 - 102022146 AGCD01000491;AGCD01000492;AGCD01000493 MODEL 8859125 protein-coding LOC102006375 olfactory receptor 5B3-like NW_004955511 3661944 3662882 - 102006375 AGCD01066472;XM_005408047 XP_005408104 MODEL 8938535 protein-coding LOC102026013 GTPase IMAP family member 5 NW_004955491 5158948 5166924 + 102026013 AGCD01060472;GBDI01128266;XM_013504613;XM_013504614;XM_013504615;XM_013504616;XM_013504617 XP_013360067;XP_013360068;XP_013360069;XP_013360070;XP_013360071 MODEL 8983572 pseudo LOC102029948 germ cell-less protein-like 1 pseudogene NW_004955462 7544814 7550335 - 102029948 AGCD01049306 MODEL 39133840 misc_rna 7SK 7SK RNA 8972534 protein-coding Xtbd1 XRN2 binding domain containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955408 5581512 5587473 - 102016023 AGCD01008142;AGCD01008143;GBCQ01006641;XM_005376150 XP_005376207 MODEL 730468998 snorna SNORD75 Small nucleolar RNA SNORD75 8977058 protein-coding Rab33b RAB33B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); intra-Golgi vesicle-mediated transport (ortholog); negative regulation of constitutive secretory pathway (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH genetic disease (ortholog); osteochondrodysplasia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi lumen (ortholog); Golgi membrane (ortholog) NW_004955428 4192357 4211740 - 102017898 AGCD01027670;GBDF01144317;XM_005386688 XP_005386745 MODEL 8973541 protein-coding LOC102024194 chymase ENCODES a protein that exhibits endopeptidase activity (ortholog); peptide binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN basement membrane disassembly (ortholog); cellular response to glucose stimulus (ortholog); cytokine precursor processing (ortholog); PARTICIPATES IN angiotensin II signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH Anaphylaxis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); extracellular region (ortholog); secretory granule (ortholog) NW_004955409 35831686 35834710 + 102024194 AGCD01010434;GBCE01119297;XM_005376994;XM_005376995 XP_005377051;XP_005377052 MODEL 9062331 protein-coding Ptpre protein tyrosine phosphatase receptor type E ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine phosphatase signaling pathway (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); regulation of mast cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955477 5688936 5838264 + 102014893 AGCD01055598;GBDF01075904;XM_005402013;XM_005402014;XM_005402018;XM_005402019;XM_013503075;XM_013503076;XM_013503077;XM_013503078 XP_005402070;XP_005402071;XP_005402075;XP_005402076;XP_013358529;XP_013358530;XP_013358531;XP_013358532 MODEL 10154706 ncrna LOC106148594 uncharacterized LOC106148594 NW_004955424 12018580 12023166 - 106148594 AGCD01024589;GBCQ01035851;XR_001234185 MODEL 8927906 protein-coding LOC102005653 cytochrome c oxidase subunit 5A, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); mitochondrial complex IV deficiency nuclear type 20 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955450 3036387 3049121 + 102005653 AGCD01042420;GBCQ01008019;XM_005393528;XM_005393529 XP_005393585;XP_005393586 MODEL 39131596 rrna 5S_rRNA 5S ribosomal RNA 39132485 rrna 5S_rRNA 5S ribosomal RNA 8979326 protein-coding Rhob ras homolog family member B ENCODES a protein that exhibits GDP binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to ionizing radiation (ortholog); ASSOCIATED WITH Avian Sarcoma (ortholog); breast cancer (ortholog); cerebral palsy (ortholog); FOUND IN cleavage furrow (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955469 2964968 2966998 + 102015099 AGCD01052289;GBCB01076295;GBCQ01002704;XM_005400352 XP_005400409 MODEL 8707725 pseudo LOC102005318 BRISC complex subunit Abro1 pseudogene NW_004955446 7660056 7661294 - 102005318 AGCD01040126 MODEL 8919161 protein-coding Polr3c RNA polymerase III subunit C ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); termination of RNA polymerase III transcription (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955568 242834 263053 - 102021492 AGCD01074506;AGCD01074507;AGCD01074508;AGCD01074509;GBCB01109428;GBDJ01127774;XM_013509335 XP_013364789 MODEL 9066928 protein-coding LOC102007904 C-C chemokine receptor type 1-like NW_004955420 25908976 25909943 + 102007904 AGCD01021382;XM_013513596 XP_013369050 MODEL 9003770 protein-coding Bco1 beta-carotene oxygenase 1 ENCODES a protein that exhibits beta-carotene 15,15'-dioxygenase activity (ortholog); INVOLVED IN beta-carotene metabolic process (ortholog); carotene catabolic process (ortholog); retinal metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955522 3985515 4018116 + 102004509 AGCD01068410;AGCD01068411;AGCD01068412;GBBH01095123;XM_005409358 XP_005409415 MODEL 8787224 protein-coding Dhps deoxyhypusine synthase ENCODES a protein that exhibits deoxyhypusine synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); peptidyl-hypusine biosynthetic process (ortholog); positive regulation of T cell proliferation (ortholog); ASSOCIATED WITH epilepsy (ortholog); Neurodevelopmental Disorder with Seizures and Speech and Walking Impairment (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955415 31778632 31782782 - 102017865 AGCD01016697;GBDK01188232;XM_005381015 XP_005381072 MODEL 8966949 protein-coding CUNH12orf56 chromosome unknown C12orf56 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); high grade glioma (ortholog) NW_004955458 11091456 11144074 - 102020531 AGCD01047717;AGCD01047718;AGCD01047719;AGCD01047720;AGCD01047721;AGCD01047722;AGCD01047723;GBBH01135200;GBDF01120995;XM_013520919 XP_013376373 MODEL 8738925 pseudo LOC102009416 60S ribosomal protein L13 pseudogene NW_004955435 16416187 16416933 - 102009416 AGCD01033326;XR_261708 MODEL 8917459 pseudo LOC102012662 protein kinase C iota type pseudogene NW_004955422 13396657 13398480 + 102012662 AGCD01022823 MODEL 8890336 protein-coding Cpeb1 cytoplasmic polyadenylation element binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amenorrhea (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); glioblastoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 13963300 14038691 + 102007658 AGCD01017240;AGCD01017241;GBDI01295225;XM_005381479;XM_005381480;XM_005381481;XM_005381482 XP_005381536;XP_005381537;XP_005381538;XP_005381539 MODEL 8765714 pseudo LOC102010601 28S ribosomal protein S36, mitochondrial pseudogene NW_004955497 1775669 1783185 - 102010601 AGCD01062473 MODEL 8773708 protein-coding Tspan9 tetraspanin 9 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN collagen-activated tyrosine kinase receptor signaling pathway (ortholog); mitocytosis (ortholog); neutrophil homeostasis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN extracellular matrix (ortholog); membrane (ortholog); migrasome (ortholog) NW_004955429 18696528 18772593 + 102026660 AGCD01028921;GBDF01307566;XM_005387133 XP_005387190 MODEL 8964947 pseudo LOC102018807 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 pseudogene NW_004955408 8524447 8526888 - 102018807 AGCD01008220 MODEL 8869555 protein-coding LOC102011387 serine/threonine-protein phosphatase with EF-hands 2-like NW_004955797 7064 18498 + 102011387 AGCD01078368;GBCQ01026990;GBDJ01093079;XM_013510194 XP_013365648 MODEL 8700207 protein-coding Dync2i2 dynein 2 intermediate chain 2 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955570 1076498 1086629 - 102030680 AGCD01074785;AGCD01074786;GBDJ01014754;XM_005413560;XM_013509405;XM_013509406;XM_013509407;XM_013509408;XM_013509409 XP_005413617;XP_013364859;XP_013364860;XP_013364861;XP_013364862;XP_013364863 MODEL 8756335 protein-coding Cand2 cullin associated and neddylation dissociated 2 (putative) ENCODES a protein that exhibits TBP-class protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955429 17891306 17913961 - 102016733 AGCD01028869;GBCB01000872;XM_013515513;XM_013515514;XM_013515515 XP_013370967;XP_013370968;XP_013370969 MODEL 10361305 protein-coding LOC106147505 neutrophil gelatinase-associated lipocalin-like NW_004955570 290848 294987 + 106147505 AGCD01081655;XM_013509379 XP_013364833 MODEL 9031540 protein-coding Armh4 armadillo like helical domain containing 4 ENCODES a protein that exhibits TORC2 complex binding (ortholog); INVOLVED IN regulation of inflammatory response (ortholog); regulation of TORC2 signaling (ortholog); response to lithium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955466 11771258 11889444 - 102029062 AGCD01051100;AGCD01051101;AGCD01051102;AGCD01051103;AGCD01051104;AGCD01051105;GBDJ01028355;XM_005399209;XM_005399210 XP_005399266;XP_005399267 MODEL 8939485 protein-coding Tapt1 transmembrane anterior posterior transformation 1 INVOLVED IN embryonic skeletal system development (ortholog); positive regulation of cilium assembly (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Bone Fractures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) NW_004955480 7833883 7892948 + 102011988 AGCD01056710;AGCD01056711;AGCD01056712;GBDF01053644;XM_005402514 XP_005402571 MODEL 8903326 protein-coding LOC102005320 UDP-glucuronosyltransferase 2B17-like NW_004955447 3893198 3953572 + 102005320 AGCD01040684;AGCD01040685;AGCD01040686;AGCD01040687;AGCD01040688;AGCD01040689;AGCD01040690;GBDJ01074833;XM_005392811;XM_013518530 XP_005392868;XP_013373984 MODEL 9023214 protein-coding Rasa2 RAS p21 protein activator 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955508 4097455 4199954 - 102029422 AGCD01065862;GBDK01323932;XM_013506264 XP_013361718 MODEL 8732843 protein-coding Samsn1 SAM domain, SH3 domain and nuclear localization signals 1 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); INVOLVED IN negative regulation of adaptive immune response (ortholog); negative regulation of B cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 16329838 16377763 - 102007298 AGCD01007213;AGCD01007214;GBDI01254171;XM_005375567;XM_013503803;XM_013503806;XR_001231017 XP_005375624;XP_013359257;XP_013359260 MODEL 8903401 protein-coding Tle1 TLE family member 1, transcriptional corepressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of anoikis (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955530 1936936 2028803 + 102008658 AGCD01069903;AGCD01069904;GBBH01187430;GBCB01002607;XM_005410111;XM_005410112;XM_005410113;XM_005410114;XM_013507549 XP_005410168;XP_005410169;XP_005410170;XP_005410171;XP_013363003 MODEL 39134390 misc_rna 7SK 7SK RNA 8779862 protein-coding LOC102006376 olfactory receptor 5L1-like NW_004955511 671617 672567 + 102006376 AGCD01066337;XM_005408205 XP_005408262 MODEL 8989246 protein-coding Slc25a17 solute carrier family 25 member 17 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); AMP transmembrane transporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN ATP transport (ortholog); fatty acid beta-oxidation (ortholog); fatty acid transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955413 26423805 26474158 - 102012523 AGCD01014441;AGCD01014442;AGCD01014443;AGCD01014444;AGCD01014445;GBDI01136067;XM_005379328 XP_005379385 MODEL 39131333 protein-coding FPR1 formyl peptide receptor 1 8825168 protein-coding Emilin3 elastin microfibril interfacer 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); EMILIN complex (ortholog) NW_004955445 15590996 15599813 + 102028030 AGCD01039848;GBDK01269639;XM_005392503;XM_005392505;XM_013518276 XP_005392560;XP_005392562;XP_013373730 MODEL 8717564 protein-coding Sirt7 sirtuin 7 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K18 deacetylase activity, NAD-dependent (ortholog); NAD-dependent protein lysine deacetylase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); homologous chromosome pairing at meiosis (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase I transcription pathway; Sirtuin mediated pathway; ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955506 1252271 1258728 + 102021374 AGCD01065252;GBDF01192905;XM_005407236;XM_005407237;XM_005407238;XM_005407239;XM_005407240;XM_013506059;XM_013506060 XP_005407293;XP_005407294;XP_005407295;XP_005407296;XP_005407297;XP_013361513;XP_013361514 MODEL 9020099 protein-coding Ccn5 cellular communication network factor 5 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); regulation of cell growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955445 12623333 12640127 - 102016645 AGCD01039759;AGCD01039760;AGCD01039761;GBDK01061750;XM_005392466;XM_013518365 XP_005392523;XP_013373819 MODEL 8822051 protein-coding Egr4 early growth response 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); middle cerebral artery infarction (ortholog) NW_004955424 12339152 12341925 + 102015739 AGCD01024604;GBDF01288078;XM_005385561 XP_005385618 MODEL 8969834 protein-coding F12 coagulation factor XII ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN blood coagulation (ortholog); Factor XII activation (ortholog); plasma kallikrein-kinin cascade (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acquired angioedema (ortholog); angioedema (ortholog); C1 inhibitor deficiency (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 29644279 29665161 - 102027946 AGCD01008765;GBDF01084005;XM_005376441;XM_005376442 XP_005376498;XP_005376499 MODEL 8813111 protein-coding Rab34 RAB34, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP-dependent protein binding (ortholog); GTPase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to glucose stimulus (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955481 4441290 4445969 + 102023152 AGCD01056939;GBDF01044851;XM_005402720;XM_005402721 XP_005402777;XP_005402778 MODEL 39133350 snrna U4 U4 spliceosomal RNA 8879080 protein-coding LOC102024196 phosphoglycerate mutase 1-like NW_004955462 9673636 9674936 + 102024196 AGCD01049341;XM_013521425 XP_013376879 MODEL 8710483 protein-coding LOC102006745 chromosome unknown open reading frame, human C5orf24 ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955408 30043402 30054015 + 102006745 AGCD01008792;AGCD01008793;GBDI01171520;XM_005376466;XM_005376467;XM_005376468 XP_005376523;XP_005376524;XP_005376525 MODEL 8939356 protein-coding LOC102003857 mediator of RNA polymerase II transcription subunit 6-like NW_004955413 23892506 23893445 - 102003857 AGCD01014339;XM_005379202;XM_013511365 XP_005379259;XP_013366819 MODEL 8975249 ncrna LOC102003519 uncharacterized LOC102003519 NW_004955459 3020453 3021512 - 102003519 AGCD01048006;GBDF01017116;XR_263011 MODEL 8845780 protein-coding LOC102013056 olfactory receptor 6C74 NW_004955458 2437549 2438499 - 102013056 AGCD01047233;XM_005397240 XP_005397297 MODEL 8771617 pseudo LOC102025325 centrosomal protein of 57 kDa-like NW_004955408 25270112 25367598 + 102025325 AGCD01008636;AGCD01008637;AGCD01008638;AGCD01008639 MODEL 8759728 protein-coding Tspear thrombospondin type laminin G domain and EAR repeats INVOLVED IN hair cycle process (ortholog); Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH anhidrosis (ortholog); asthma (ortholog); atrioventricular septal defect (ortholog); FOUND IN cell surface (ortholog); ciliary membrane (ortholog); extracellular region (ortholog) NW_004955407 41513538 41566931 - 102009147 AGCD01007870;GBDJ01386456;XM_013506099 XP_013361553 MODEL 8771381 pseudo LOC102007906 vomeronasal type-1 receptor 48-like NW_004955421 21878638 21880909 - 102007906 AGCD01022124;XM_005383931 MODEL 8833408 protein-coding Chst7 carbohydrate sulfotransferase 7 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); N-acetylglucosamine metabolic process (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955516 1435972 1466249 - 102026462 AGCD01067426;AGCD01067427;GBCB01008873;XM_005408977;XM_005408978;XM_005408979;XR_264531 XP_005409034;XP_005409035;XP_005409036 MODEL 8957718 protein-coding Bco2 beta-carotene oxygenase 2 ENCODES a protein that exhibits beta,beta-carotene-9',10'-cleaving oxygenase activity (ortholog); oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (ortholog); INVOLVED IN carotene catabolic process (ortholog); carotene metabolic process (ortholog); carotenoid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955412 13838260 13872886 + 102029836 AGCD01012846;GBDF01116400;XM_005378119;XM_013511045 XP_005378176;XP_013366499 MODEL 9023794 protein-coding Xxylt1 xyloside xylosyltransferase 1 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog); protein O-linked glycosylation via N-acetylgalactosamine (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955420 13781391 13921711 + 102025129 AGCD01020930;GBBH01063336;GBCB01101112;XM_013513577 XP_013369031 MODEL 8980768 protein-coding Ppp1r3a protein phosphatase 1 regulatory subunit 3A PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 9 (ortholog); diabetes mellitus (ortholog); hypoglycemia (ortholog) NW_004955432 19854649 19893148 - 102007460 AGCD01031193;GBCB01005118;XM_005388110;XM_005388111 XP_005388167;XP_005388168 MODEL 8932699 protein-coding CUNH12orf73 chromosome unknown C12orf73 homolog INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955405 38651787 38656564 - 102008056 AGCD01005482;GBBH01003432;XM_005374579 XP_005374636 MODEL 8783869 protein-coding Ddo D-aspartate oxidase ENCODES a protein that exhibits D-aspartate oxidase activity (ortholog); D-glutamate oxidase activity (ortholog); FAD binding (ortholog); INVOLVED IN aspartate metabolic process (ortholog); D-amino acid catabolic process (ortholog); grooming behavior (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN cytosol (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955411 35142415 35163234 - 102022896 AGCD01012420;GBCQ01014237;XM_005377886;XM_005377887;XM_013510893;XM_013510894 XP_005377943;XP_005377944;XP_013366347;XP_013366348 MODEL 8826631 protein-coding LOC102012663 adenylate kinase isoenzyme 1 NW_004955495 3193444 3209238 - 102012663 AGCD01061835;AGCD01061836;AGCD01061837;GBDF01307680;XM_005405718;XR_001231378;XR_264139;XR_264140;XR_264141 XP_005405775 MODEL 9044640 protein-coding Iqcc IQ motif containing C ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog) NW_004955452 10574034 10576898 + 102018253 AGCD01044280;GBCQ01124429;XM_005395053 XP_005395110 MODEL 10161169 ncrna LOC106148595 uncharacterized LOC106148595 NW_004955424 19460514 19463091 + 106148595 AGCD01024827;GBDF01260862;XR_001234187 MODEL 9050628 ncrna LOC102018808 uncharacterized LOC102018808 NW_004955409 12167060 12175776 - 102018808 AGCD01009538;GBCE01171561;XR_001232649 MODEL 8783238 protein-coding Ptprf protein tyrosine phosphatase receptor type F ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN cell migration (ortholog); homophilic cell-cell adhesion (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH Aplasia or Hypoplasia of Breasts and/or Nipples 2 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endosome (ortholog); excitatory synapse (ortholog); growth cone (ortholog) NW_004955537 3096601 3185682 + 102029007 AGCD01070946;AGCD01070947;AGCD01070948;GBDI01341617;XM_005410662;XM_005410663;XM_005410664;XM_005410665;XM_005410670 XP_005410719;XP_005410720;XP_005410721;XP_005410722;XP_005410727 MODEL 39132487 rrna 5S_rRNA 5S ribosomal RNA 9048480 protein-coding LOC102005656 retinol dehydrogenase 7-like NW_004955641 46039 49565 - 102005656 AGCD01077703;AGCD01077704;XM_005415046 XP_005415103 MODEL 9025242 protein-coding LOC102011388 cytochrome P450 2D16-like NW_004956190 7085 8242 + 102011388 AGCD01079215;GBCQ01011641;GBDK01146022;XM_005415175 XP_005415232 MODEL 8958132 protein-coding Rhobtb1 Rho related BTB domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955425 14299128 14366732 - 102017254 AGCD01025558;AGCD01025559;GBDI01355365;XM_005385941;XM_005385942;XM_013514879 XP_005385998;XP_005385999;XP_013370333 MODEL 8907425 pseudo LOC102026017 acidic leucine-rich nuclear phosphoprotein 32 family member E pseudogene NW_004955422 22142218 22142933 - 102026017 AGCD01023146;XR_260934 MODEL 9009390 protein-coding Polr3d RNA polymerase III subunit D ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); termination of RNA polymerase III transcription (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955403 45721266 45727214 + 102005657 AGCD01002826;GBDK01187148;XM_005373655 XP_005373712 MODEL 8861228 protein-coding Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); intraciliary transport involved in cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); centrosome (ortholog) NW_004955441 10928577 10961194 + 102027573 AGCD01037096;AGCD01037097;AGCD01037098;GBDF01006691;XM_005390934 XP_005390991 MODEL 10371143 protein-coding LOC106147506 neutrophil gelatinase-associated lipocalin-like NW_004955570 474594 492183 + 106147506 AGCD01074728;AGCD01074729;AGCD01074730;XM_013509382 XP_013364836 MODEL 8929076 pseudo LOC102029950 olfactory receptor 8B3-like NW_004955412 25315754 25333256 - 102029950 AGCD01013143;AGCD01013144;AGCD01013145;AGCD01013146;AGCD01013147 MODEL 730469343 snorna SNORD77 Small nucleolar RNA SNORD77 9006345 protein-coding Arnt aryl hydrocarbon receptor nuclear translocator ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to oxidative stress (ortholog); circadian rhythm (ortholog); PARTICIPATES IN aryl hydrocarbon receptor signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); FOUND IN cytoplasm (ortholog); nuclear aryl hydrocarbon receptor complex (ortholog); nuclear body (ortholog) NW_004955588 159462 233047 - 102014511 AGCD01076094;AGCD01076095;GBDK01282880;XM_005414453;XM_005414454;XM_005414455;XM_005414456;XM_013509931 XP_005414510;XP_005414511;XP_005414512;XP_005414513;XP_013365385 MODEL 8987781 protein-coding Dhrs1 dehydrogenase/reductase 1 ENCODES a protein that exhibits carbonyl reductase (NADPH) activity (ortholog); oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955409 36002576 36040595 + 102018811 AGCD01010438;AGCD01010439;AGCD01010440;GBCE01000652;GBDK01020457;XM_013510399 XP_013365853 MODEL 9057896 protein-coding LOC102009418 uncharacterized LOC102009418 NW_004955528 214625 215535 - 102009418 AGCD01069515;XM_005410049 XP_005410106 MODEL 8883978 protein-coding Lrwd1 leucine rich repeats and WD repeat domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K27me3 reader activity (ortholog); methyl-CpG binding (ortholog); INVOLVED IN chromatin organization (ortholog); establishment of protein localization to chromatin (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); kinetochore (ortholog); nuclear origin of replication recognition complex (ortholog) NW_004955456 15151275 15158332 - 102014419 AGCD01046662;GBDF01088635;XM_005396833 XP_005396890 MODEL 9013738 protein-coding Chst8 carbohydrate sulfotransferase 8 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN hormone biosynthetic process (ortholog); proteoglycan biosynthetic process (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog) NW_004955468 3357368 3486195 + 102028401 AGCD01051859;AGCD01051860;GBDF01158746;XM_005399989;XM_005399990;XM_005399991;XM_005399992 XP_005400046;XP_005400047;XP_005400048;XP_005400049 MODEL 8892623 protein-coding Rasa3 RAS p21 protein activator 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN cellular response to heat (ortholog); platelet activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog) NW_004955404 140906 225278 + 102026386 AGCD01003197;AGCD01003198;GBDI01126335;XM_005373923;XM_005373928;XM_013515439;XM_013515445;XM_013515454 XP_005373980;XP_005373985;XP_013370893;XP_013370899;XP_013370908 MODEL 39131597 rrna 5S_rRNA 5S ribosomal RNA 8868414 protein-coding Tle2 TLE family member 2, transcriptional corepressor ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear body (ortholog) NW_004955495 5347496 5366743 + 102026761 AGCD01062002;GBBH01012059;GBDI01296754;XM_013505226 XP_013360680 MODEL 39132820 snorna SNORA63 Small nucleolar RNA SNORA63 8845469 pseudo LOC102010608 RWD domain-containing protein 1 pseudogene NW_004955429 4973092 4973820 - 102010608 AGCD01028499 MODEL 8718710 protein-coding Cpeb2 cytoplasmic polyadenylation element binding protein 2 ENCODES a protein that exhibits GTPase inhibitor activity (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); negative regulation of cytoplasmic translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955480 8853449 8906859 - 102019499 AGCD01056733;GBCQ01006152;GBDK01277233;XM_013503330 XP_013358784 MODEL 39133842 misc_rna 7SK 7SK RNA 9042876 ncrna LOC102003860 uncharacterized LOC102003860 NW_004955470 10705641 10717884 + 102003860 AGCD01052875;GBCE01089457;XR_263497 MODEL 9030587 protein-coding Rab35 RAB35, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to nerve growth factor stimulus (ortholog); endosomal transport (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell projection membrane (ortholog); clathrin-coated endocytic vesicle (ortholog); clathrin-coated pit (ortholog) NW_004955455 11484557 11502630 + 102014978 AGCD01046006;AGCD01046007;GBDF01246895;XM_005396519 XP_005396576 MODEL 8880648 protein-coding LOC102013057 interferon-inducible GTPase 1-like NW_004955408 2302552 2307297 - 102013057 AGCD01008003;GBDJ01001366;XM_013507347 XP_013362801 MODEL 8744015 ncrna LOC102005321 uncharacterized LOC102005321 NW_004955575 1196092 1210167 + 102005321 AGCD01075234;GBDF01148249;XR_265071 MODEL 8920691 protein-coding Tarbp1 tRNA guanosine 2 -O-methyltransferase TARBP1 ENCODES a protein that exhibits tRNA (guanine(18)-2'-O-ribose)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955492 5252949 5313008 + 102027313 AGCD01060739;AGCD01060740;GBBH01126216;GBBH01126227;XM_005404955;XM_013504710 XP_005405012;XP_013360164 MODEL 8852868 protein-coding Tspo translocator protein ENCODES a protein that exhibits androgen binding (ortholog); benzodiazepine receptor activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN adrenal gland development (ortholog); behavioral response to pain (ortholog); C21-steroid hormone biosynthetic process (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH cholesterol ester storage disease (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955413 28309105 28315075 + 102016254 AGCD01014556;GBDK01018713;XM_005379436;XM_005379437;XM_005379438 XP_005379493;XP_005379494;XP_005379495 MODEL 39134391 misc_rna 7SK 7SK RNA 8994491 protein-coding Sanbr SANT and BTB domain regulator of CSR ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN isotype switching (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955424 22728802 22785374 - 102024931 AGCD01024983;AGCD01024984;AGCD01024985;AGCD01024986;AGCD01024987;GBDI01291851;GBDJ01419693;XM_013514723 XP_013370177 MODEL 8811103 ncrna LOC102006378 uncharacterized LOC102006378 NW_004955431 11018368 11079905 + 102006378 AGCD01030216;AGCD01030217;AGCD01030218;AGCD01030219;AGCD01030220;AGCD01030221;AGCD01030222;AGCD01030223;GBDF01303264;XR_001234572;XR_261463 MODEL 8718994 protein-coding Fra10ac1 fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); astigmatism (ortholog); FOUND IN nucleus (ortholog) NW_004955507 182212 242313 - 102030101 AGCD01065464;AGCD01065465;GBBH01006628;XM_005407520;XM_005407521;XM_005407522 XP_005407577;XP_005407578;XP_005407579 MODEL 8921245 protein-coding Slc25a18 solute carrier family 25 member 18 ENCODES a protein that exhibits amino acid:proton symporter activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955454 5648255 5668754 + 102003409 AGCD01045179;AGCD01045180;GBDI01215966;XM_005395974;XM_005395975;XM_005395977 XP_005396031;XP_005396032;XP_005396034 MODEL 8749893 ncrna LOC102022149 uncharacterized LOC102022149 NW_004955451 4480697 4489701 + 102022149 AGCD01043126;GBDF01048873;XR_001235968;XR_262573;XR_262574 MODEL 8905022 pseudo LOC102009420 proteasome assembly chaperone 2 pseudogene NW_004955536 716838 717352 + 102009420 AGCD01070737 MODEL 9011666 pseudo LOC102006747 spermatid perinuclear RNA-binding protein-like NW_004955459 3238938 3257604 - 102006747 AGCD01048011;AGCD01048012 MODEL 8929684 protein-coding Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); oligosaccharyltransferase complex (ortholog) NW_004955452 1186733 1195691 - 102020745 AGCD01043835;GBDJ01006766;XM_005394684 XP_005394741 MODEL 8839654 protein-coding F13a1 coagulation factor XIII A chain ENCODES a protein that exhibits protein-glutamine gamma-glutamyltransferase activity (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, fibrin clot formation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); arteriosclerosis (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955465 7444118 7617366 + 102006885 AGCD01050461;AGCD01050462;AGCD01050463;AGCD01050464;GBBH01102684;XM_013521832;XM_013521833 XP_013377286;XP_013377287 MODEL 8955019 protein-coding Cant1 calcium activated nucleotidase 1 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); calcium ion binding (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); proteoglycan biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH Desbuquois dysplasia (ortholog); Desbuquois Dysplasia 1 (ortholog); Dwarfism (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955506 3707028 3722339 + 102027207 AGCD01065319;GBCQ01101032;XM_005407348;XM_005407349;XM_005407350;XM_005407351;XM_005407352 XP_005407405;XP_005407406;XP_005407407;XP_005407408;XP_005407409 MODEL 9035096 pseudo LOC102003520 60S ribosomal protein L39 pseudogene NW_004955459 14326789 14327010 - 102003520 AGCD01048297 MODEL 9003502 ncrna LOC102025326 uncharacterized LOC102025326 NW_004955409 8371307 8391398 + 102025326 AGCD01009402;AGCD01009403;AGCD01009404;AGCD01009405;AGCD01009406;GBDF01190789;XR_001232688;XR_259758 MODEL 8905832 protein-coding Tle3 TLE family member 3, transcriptional corepressor ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955450 6604915 6645305 + 102011928 AGCD01042523;GBDJ01015569;XM_005393646;XM_005393647;XM_005393648;XM_005393649;XM_005393650;XM_005393651;XM_005393652;XM_005393654;XM_005393655;XM_005393656;XM_005393657;XM_013518996;XM_013518998 XP_005393703;XP_005393704;XP_005393705;XP_005393706;XP_005393707;XP_005393708;XP_005393709;XP_005393711;XP_005393712;XP_005393713;XP_005393714;XP_013374450;XP_013374452 MODEL 8881808 ncrna LOC102005660 uncharacterized LOC102005660 NW_004955404 45053525 45082173 - 102005660 AGCD01004437;XR_001234995;XR_259339 MODEL 8754825 ncrna LOC102007907 uncharacterized LOC102007907 NW_004955491 1073965 1082901 - 102007907 AGCD01060347;GBCB01024533;XR_264032 MODEL 8750635 protein-coding Rhobtb2 Rho related BTB domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) NW_004955403 46367390 46390551 + 102016123 AGCD01002856;GBBH01177038;XM_005373692;XM_005373693;XM_013513944 XP_005373749;XP_005373750;XP_013369398 MODEL 8773472 protein-coding Sit1 signaling threshold regulating transmembrane adaptor 1 ENCODES a protein that exhibits kinase binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN regulation of T cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955472 643923 645802 + 102010991 AGCD01053344;AGCD01053345;GBBH01063625;GBCE01055336;XM_005401179 XP_005401236 MODEL 8855336 protein-coding Dynll1 dynein light chain LC8-type 1 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN intraciliary retrograde transport (ortholog); mitocytosis (ortholog); motile cilium assembly (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); cardiac arrest (ortholog); FOUND IN axon cytoplasm (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955455 11148041 11150860 - 102010027 AGCD01045984;GBCB01022810;XM_005396503;XM_005396504 XP_005396560;XP_005396561 MODEL 8972080 protein-coding Xylb xylulokinase ENCODES a protein that exhibits D-xylulokinase activity (ortholog); INVOLVED IN xylulose metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog) NW_004955427 25492505 25528674 - 102026893 AGCD01027543;AGCD01027544;GBBH01016241;GBCQ01008840;XM_013515188 XP_013370642 MODEL 8917253 protein-coding Eml1 EMAP like 1 ENCODES a protein that exhibits microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN brain development (ortholog); hematopoietic progenitor cell differentiation (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); congenital nervous system abnormality (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955438 20991432 21137570 + 102030477 AGCD01035528;AGCD01035529;GBCB01022439;XM_005390419;XM_005390420;XM_005390421;XM_005390422;XM_005390423;XM_005390424;XM_005390425 XP_005390476;XP_005390477;XP_005390478;XP_005390479;XP_005390480;XP_005390481;XP_005390482 MODEL 8980676 protein-coding Ccn6 cellular communication network factor 6 INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH arthropathy (ortholog); breast metaplastic carcinoma (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); mitochondrion (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955526 4501331 4525866 - 102006705 AGCD01069368;GBDJ01313420;XM_013507358 XP_013362812 MODEL 39133351 snrna U4 U4 spliceosomal RNA 8749865 protein-coding Ppp1r3b protein phosphatase 1 regulatory subunit 3B ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); enzyme binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN negative regulation of glycogen catabolic process (ortholog); positive regulation of glycogen biosynthetic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN glycogen granule (ortholog); protein phosphatase type 1 complex (ortholog) NW_004955463 5208127 5220970 - 102019783 AGCD01049637;GBBH01150362;XM_005398360;XM_005398361 XP_005398417;XP_005398418 MODEL 8886505 protein-coding Ehbp1 EH domain binding protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955424 21151473 21500044 - 102015647 AGCD01024895;AGCD01024896;AGCD01024897;AGCD01024898;GBDF01043859;XM_005385724;XM_005385725;XM_005385727;XM_005385730;XM_013514691;XM_013514692 XP_005385781;XP_005385782;XP_005385784;XP_005385787;XP_013370145;XP_013370146 MODEL 8786433 protein-coding LOC102012664 guanylate-binding protein 5 NW_004955423 5021524 5040124 + 102012664 AGCD01023551;AGCD01023552;AGCD01023553;GBDK01006467;XM_005385100 XP_005385157 MODEL 8780185 ncrna LOC102018813 uncharacterized LOC102018813 NW_004955462 2479323 2494809 + 102018813 AGCD01049169;GBDJ01029436;XR_001236615 MODEL 8743583 ncrna LOC102010609 uncharacterized LOC102010609 NW_004955508 2826273 2855521 + 102010609 AGCD01065798;GBBH01228727;XR_001231644 MODEL 39132489 rrna 5S_rRNA 5S ribosomal RNA 8713405 protein-coding Iqce IQ motif containing E INVOLVED IN limb morphogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to motile cilium (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955460 12676649 12724613 + 102013257 AGCD01048661;AGCD01048662;GBBH01003129;GBDF01005523;XM_013521153 XP_013376607 MODEL 8878290 protein-coding LOC102022150 olfactory receptor 19 NW_004955626 1451 5132 - 102022150 AGCD01077461;XM_005415023 XP_005415080 MODEL 8968201 protein-coding LOC102011390 kynurenine/alpha-aminoadipate aminotransferase, mitochondrial-like NW_004955403 36263930 36284758 + 102011390 AGCD01002535;AGCD01002536;GBCQ01008057;GBCQ01008066;XM_013513334 XP_013368788 MODEL 8820091 protein-coding Ptprg protein tyrosine phosphatase receptor type G ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of epithelial cell migration (ortholog); negative regulation of neuron projection development (ortholog); regulation of homophilic cell adhesion (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955517 3676342 4352909 - 102003052 AGCD01067669;AGCD01067670;AGCD01067671;AGCD01067672;AGCD01067673;AGCD01067674;AGCD01067675;AGCD01067676;AGCD01067677;AGCD01067678;AGCD01067679;AGCD01067680;AGCD01067681;AGCD01067682;AGCD01067683;AGCD01067684;AGCD01067685;AGCD01067686;AGCD01067687;AGCD01067688;AGCD01067689;GBDF01090393;GBDF01090403;XM_013506946 XP_013362400 MODEL 8887906 ncrna LOC102003861 uncharacterized LOC102003861 NW_004955472 10850722 10854380 + 102003861 AGCD01053727;GBDF01178480;XR_263568 MODEL 8982275 pseudo LOC102005322 tubulin beta chain-like NW_004955402 252450 252882 - 102005322 AGCD01000015 MODEL 8889828 protein-coding LOC102013060 chromosome-associated kinesin KIF4A-like NW_004955409 19322565 19326894 - 102013060 AGCD01009867;GBDF01046103;XM_005376878 XP_005376935 MODEL 8858150 protein-coding Rab36 RAB36, member RAS oncogene family NW_004955455 7574376 7590024 + 102023775 AGCD01045861;GBDI01171154;XM_005396362;XM_005396363;XM_005396364;XM_013520319;XR_262841 XP_005396419;XP_005396420;XP_005396421;XP_013375773 MODEL 8814673 pseudo LOC102024197 60 kDa heat shock protein, mitochondrial pseudogene NW_004955410 27911219 27913074 + 102024197 AGCD01011228 MODEL 8951594 protein-coding Arnt2 aryl hydrocarbon receptor nuclear translocator 2 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN brain development (ortholog); central nervous system development (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955416 11279866 11429365 + 102018392 AGCD01017182;AGCD01017183;AGCD01017184;GBDF01254089;XM_005381432;XM_013512637;XM_013512638;XM_013512639;XM_013512640;XM_013512641;XM_013512642;XM_013512643 XP_005381489;XP_013368091;XP_013368092;XP_013368093;XP_013368094;XP_013368095;XP_013368096;XP_013368097 MODEL 8819354 protein-coding Tspo2 translocator protein 2 ENCODES a protein that exhibits 5-aminolevulinic acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); INVOLVED IN 5-aminolevulinic acid import across plasma membrane (ortholog); enucleate erythrocyte differentiation (ortholog); import across plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955437 7714107 7715796 + 102005506 AGCD01034465;GBBH01126606;XM_005389665;XM_005389666 XP_005389722;XP_005389723 MODEL 8787195 protein-coding Chst9 carbohydrate sulfotransferase 9 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN sulfur compound metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955402 14892707 15115846 - 102014958 AGCD01000439;AGCD01000440;AGCD01000441;GBDJ01114105;XM_005372733;XM_005372734;XM_005372735;XM_013506087;XM_013506121;XM_013506152 XP_005372790;XP_005372791;XP_005372792;XP_013361541;XP_013361575;XP_013361606 MODEL 8715172 protein-coding Rhobtb3 Rho related BTB domain containing 3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); small GTPase binding (ortholog); INVOLVED IN male gonad development (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955418 16772363 16839347 - 102028966 AGCD01019128;AGCD01019129;GBCE01159877;GBDK01193526;XM_013512974 XP_013368428 MODEL 10238133 pseudo LOC106148596 zinc finger Ran-binding domain-containing protein 2 pseudogene NW_004955403 31584353 31585710 - 106148596 AGCD01002421 MODEL 9033119 protein-coding Rasa4b RAS p21 protein activator 4B ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955456 15114525 15143493 + 102012611 AGCD01046662;GBDI01067417;XM_005396825;XM_005396826;XM_013520629;XM_013520630;XM_013520631;XM_013520632;XM_013520633;XR_001236353;XR_001236354 XP_005396882;XP_005396883;XP_013376083;XP_013376084;XP_013376085;XP_013376086;XP_013376087 MODEL 39132802 snorna SNORA63 Small nucleolar RNA SNORA63 8809183 protein-coding Eml2 EMAP like 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); regulation of microtubule nucleation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitotic spindle (ortholog) NW_004955574 106788 135289 - 102014957 AGCD01075084;AGCD01075085;GBDF01043668;XM_005413789 XP_005413846 MODEL 8725008 protein-coding Slc25a19 solute carrier family 25 member 19 ENCODES a protein that exhibits deoxynucleotide transmembrane transporter activity (ortholog); thiamine pyrophosphate transmembrane transporter activity (ortholog); INVOLVED IN deoxynucleotide transport (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine pyrophosphate transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Amish Lethal Microcephaly (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955553 2134715 2160777 - 102025729 AGCD01072924;AGCD01072925;AGCD01072926;AGCD01072927;AGCD01072928;AGCD01072929;GBBH01228703;XM_005412291;XM_005412292;XM_013508653 XP_005412348;XP_005412349;XP_013364107 MODEL 39133844 misc_rna 7SK 7SK RNA 8836844 protein-coding LOC102009424 keratin, type II cytoskeletal 5-like NW_004955547 2759440 2771836 - 102009424 AGCD01072294;XM_005411942 XP_005411999 MODEL 10189781 protein-coding LOC106147507 uncharacterized LOC106147507 NW_004955570 1757296 1759831 + 106147507 AGCD01074828;GBDK01070947;XM_013509384 XP_013364838 MODEL 8851259 protein-coding LOC102029951 zinc finger protein 850 NW_004955468 1902794 2180711 - 102029951 AGCD01051786;AGCD01051787;AGCD01051788;AGCD01051789;AGCD01051790;AGCD01051791;AGCD01051792;AGCD01051793;AGCD01051794;AGCD01051795;AGCD01051796;AGCD01051797;AGCD01051798;AGCD01051799;AGCD01051800;GBDJ01213566;XM_013522334 XP_013377788 MODEL 8835666 protein-coding CUNH12orf75 chromosome unknown C12orf75 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955405 39595762 39623671 + 102018154 AGCD01005502;GBDF01133707;XM_005374610;XM_013518997 XP_005374667;XP_013374451 MODEL 8721617 pseudo LOC102003523 dimethylaniline monooxygenase [N-oxide-forming] 5-like NW_004955462 10251055 10272845 - 102003523 AGCD01049359;AGCD01049360 MODEL 730469118 snorna SNORD77 Small nucleolar RNA SNORD77 8728823 ncrna LOC102007912 uncharacterized LOC102007912 NW_004955495 2955662 2964666 + 102007912 AGCD01061813;GBDF01294554;XR_264137 MODEL 9022604 protein-coding Dhrs11 dehydrogenase/reductase 11 ENCODES a protein that exhibits 17-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN steroid biosynthetic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog) NW_004955451 1335134 1343271 - 102029349 AGCD01042966;GBCE01152721;GBCQ01009204;XM_005393942 XP_005393999 MODEL 8792637 protein-coding Tarbp2 TARBP2 subunit of RISC loading complex ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN miRNA processing (ortholog); multicellular organism growth (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); RISC complex (ortholog) NW_004955458 793753 798755 + 102021736 AGCD01047154;GBDF01005633;XM_005397180;XM_005397181;XM_005397182;XM_005397183 XP_005397237;XP_005397238;XP_005397239;XP_005397240 MODEL 8782912 protein-coding Tle4 TLE family member 4, transcriptional corepressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955530 3795336 3932596 - 102014942 AGCD01069963;AGCD01069964;GBCC01033359;GBDF01281043;XM_013507550 XP_013363004 MODEL 8866380 protein-coding Lsamp limbic system associated membrane protein INVOLVED IN locomotory exploration behavior (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytosol (ortholog); postsynaptic membrane (ortholog); presynaptic membrane (ortholog) NW_004955427 15871178 16475975 - 102013104 AGCD01027304;AGCD01027305;AGCD01027306;AGCD01027307;AGCD01027308;AGCD01027309;AGCD01027310;AGCD01027311;AGCD01027312;AGCD01027313;AGCD01027314;AGCD01027315;GBDJ01356430;XM_005386425;XM_005386426 XP_005386482;XP_005386483 MODEL 39134392 misc_rna 7SK 7SK RNA 39131600 rrna 5S_rRNA 5S ribosomal RNA 9044652 protein-coding Fras1 Fraser extracellular matrix complex subunit 1 INVOLVED IN embryonic limb morphogenesis (ortholog); metanephros morphogenesis (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Axenfeld-Rieger syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basement membrane (ortholog); non-collagenous component of basement membrane (ortholog); plasma membrane (ortholog) NW_004955433 2547228 2957294 + 102019942 AGCD01031399;AGCD01031400;AGCD01031401;AGCD01031402;AGCD01031403;AGCD01031404;GBCE01155180;XM_005388203;XM_005388207;XM_013516132 XP_005388260;XP_005388264;XP_013371586 MODEL 9040942 ncrna LOC102006752 uncharacterized LOC102006752 NW_004955410 28863475 28865857 + 102006752 AGCD01011262;GBCB01001006;XR_259878 MODEL 8914688 protein-coding Ppp1r3c protein phosphatase 1 regulatory subunit 3C ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); enzyme binding (ortholog); glycogen binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); glycogen metabolic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); prostate cancer (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); glycogen granule (ortholog) NW_004955425 1606069 1611001 + 102007916 AGCD01025235;AGCD01025236;GBDI01326617;XM_005385829 XP_005385886 MODEL 8813534 protein-coding Polr3e RNA polymerase III subunit E INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955493 933381 962314 + 102012547 AGCD01060873;GBDF01119676;XM_005405071;XM_005405076;XM_005405077;XM_013504853 XP_005405128;XP_005405133;XP_005405134;XP_013360307 MODEL 39132494 rrna 5S_rRNA 5S ribosomal RNA 8900301 protein-coding Ddr1 discoidin domain receptor tyrosine kinase 1 ENCODES a protein that exhibits collagen binding (ortholog); protein tyrosine kinase collagen receptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); axon development (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcoholic hepatitis (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border (ortholog); plasma membrane (ortholog) NW_004955583 820893 838515 + 102019869 AGCD01075866;AGCD01075867;AGCD01075868;GBCB01060373;XM_005414320;XM_013509826;XM_013509827;XM_013509828;XM_013509829;XM_013509830;XM_013509831;XM_013509832;XM_013509833 XP_005414377;XP_013365280;XP_013365281;XP_013365282;XP_013365283;XP_013365284;XP_013365285;XP_013365286;XP_013365287 MODEL 8984525 protein-coding Bcor BCL6 corepressor ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); alveolar rhabdomyosarcoma (ortholog); FOUND IN BCOR complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955566 1412540 1510339 - 102008470 AGCD01074359;AGCD01074360;AGCD01074361;AGCD01074362;AGCD01074363;GBBH01126083;XM_005413277;XM_005413278;XM_005413279;XM_005413280;XM_005413281;XM_013509214;XM_013509215;XM_013509216;XM_013509217 XP_005413334;XP_005413335;XP_005413336;XP_005413337;XP_005413338;XP_013364668;XP_013364669;XP_013364670;XP_013364671 MODEL 9032679 ncrna LOC102025329 uncharacterized LOC102025329 NW_004955461 14190918 14214161 + 102025329 AGCD01049048;GBDI01306582;XR_001236562 MODEL 8851735 protein-coding Rasal1 RAS protein activator like 1 INVOLVED IN positive regulation of dendrite extension (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955482 9447984 9471852 - 102013722 AGCD01057570;AGCD01057571;GBBH01069782;GBCQ01151933;XM_013503712 XP_013359166 MODEL 8964990 protein-coding LOC102022151 olfactory receptor 8B12-like NW_004956494 2419 3366 - 102022151 AGCD01079688;XM_005415202 XP_005415259 MODEL 8790384 protein-coding LOC102005661 hematopoietic prostaglandin D synthase-like NW_004955405 437618 453991 + 102005661 AGCD01004560;GBDK01126143;XM_005374245;XR_001235167;XR_001235168;XR_259351 XP_005374302 MODEL 8759565 ncrna LOC102003862 uncharacterized LOC102003862 NW_004955474 6739005 6740107 + 102003862 AGCD01054490;GBDF01162687;XR_263599 MODEL 8991492 pseudo LOC102006382 non-histone chromosomal protein HMG-14 pseudogene NW_004955515 1139391 1139869 - 102006382 AGCD01067220 MODEL 39132500 rrna 5S_rRNA 5S ribosomal RNA 39133352 snrna U4 U4 spliceosomal RNA 8867999 pseudo LOC102013061 cysteine-rich with EGF-like domain protein 2 pseudogene NW_004955409 26647055 26648471 + 102013061 AGCD01010196 MODEL 8975176 protein-coding Xylt1 xylosyltransferase 1 ENCODES a protein that exhibits protein xylosyltransferase activity (ortholog); INVOLVED IN cellular response to heat (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); embryonic skeletal system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); Golgi cis cisterna (ortholog) NW_004955442 1787338 2042523 + 102030008 AGCD01037453;GBDI01292471;XM_013517878 XP_013373332 MODEL 8889623 protein-coding Cpeb3 cytoplasmic polyadenylation element binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to amino acid stimulus (ortholog); long-term memory (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical dendrite (ortholog); CCR4-NOT complex (ortholog); cytoplasm (ortholog) NW_004955425 1032446 1224300 + 102006933 AGCD01025215;AGCD01025216;AGCD01025217;AGCD01025218;GBDF01010045;XM_013514850;XM_013514851 XP_013370304;XP_013370305 MODEL 8872567 protein-coding Ccna1 cyclin A1 PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cyclin A1-CDK2 complex (ortholog); microtubule cytoskeleton (ortholog) NW_004955431 9658301 9668659 - 102028450 AGCD01030190;AGCD01030191;GBDF01010345;XM_005387680 XP_005387737 MODEL 8702957 protein-coding Arpc1a actin related protein 2/3 complex subunit 1A INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Arp2/3 protein complex (ortholog); glutamatergic synapse (ortholog); muscle cell projection membrane (ortholog) NW_004955460 15022663 15050955 + 102006751 AGCD01048767;GBDF01050144;XM_005397933 XP_005397990 MODEL 8857593 ncrna LOC102012665 uncharacterized LOC102012665 NW_004955425 2406340 2448278 - 102012665 AGCD01025262;AGCD01025263;GBDF01006731;XR_261120 MODEL 8858992 protein-coding Tspoap1 TSPO associated protein 1 ENCODES a protein that exhibits benzodiazepine receptor binding (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); INVOLVED IN regulation of neurotransmitter secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN calyx of Held (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955451 4707440 4733179 + 102027599 AGCD01043140;GBDK01066816;XM_013519267;XM_013519268;XM_013519269;XM_013519270;XM_013519271;XM_013519272 XP_013374721;XP_013374722;XP_013374723;XP_013374724;XP_013374725;XP_013374726 MODEL 9005530 protein-coding LOC102010611 olfactory receptor 1013-like NW_004955511 1796248 1797165 + 102010611 AGCD01066380;XM_005407977 XP_005408034 MODEL 8783345 protein-coding Canx calnexin ENCODES a protein that exhibits apolipoprotein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); dendrite cytoplasm (ortholog); dendritic spine (ortholog) NW_004955408 850773 894362 - 102004245 AGCD01007937;AGCD01007938;AGCD01007939;GBCQ01000683;XM_005376018;XM_005376019 XP_005376075;XP_005376076 MODEL 8909146 protein-coding Iqcf2 IQ motif containing F2 NW_004955532 3532747 3534214 + 102021173 AGCD01070286;GBDF01117995;XM_005410326 XP_005410383 MODEL 8969387 ncrna LOC102009425 uncharacterized LOC102009425 NW_004955549 824578 919142 - 102009425 AGCD01072431;GBCE01065742;XR_001232253;XR_001232254;XR_001232255;XR_001232256;XR_001232257;XR_264914 MODEL 8901726 protein-coding Slc25a20 solute carrier family 25 member 20 ENCODES a protein that exhibits carnitine:O-acyl-L-carnitine antiporter activity (ortholog); O-acyl-L-carnitine transmembrane transporter activity (ortholog); INVOLVED IN carnitine shuttle (ortholog); carnitine transmembrane transport (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); carnitine-acylcarnitine translocase deficiency (ortholog); carnitine-acylcarnitine translocase deficiency (ortholog); FOUND IN mitochondrion (ortholog) NW_004955532 902937 933675 - 102004750 AGCD01070158;AGCD01070159;GBDJ01176959;XM_005410172;XM_005410173 XP_005410229;XP_005410230 MODEL 39131343 protein-coding SIT1 signaling threshold regulating transmembrane adaptor 1 8903601 protein-coding Sap130 Sin3A associated protein 130 INVOLVED IN embryonic placenta development (ortholog); in utero embryonic development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog) NW_004955459 2529373 2602864 + 102019034 AGCD01047992;AGCD01047993;GBDI01221722;XM_013521047 XP_013376501 MODEL 10118238 ncrna LOC106147508 uncharacterized LOC106147508 NW_004955570 1156274 1163013 + 106147508 AGCD01074793;AGCD01074794;GBCQ01139193;XR_001232432 MODEL 730469551 snorna SNORD78 Small nucleolar RNA SNORD78 8799746 ncrna LOC102005323 uncharacterized LOC102005323 NW_004955402 4782171 4812521 - 102005323 AGCD01000126;AGCD01000127;GBDI01204334;XR_001236325;XR_259027 MODEL 8739191 pseudo LOC102024199 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955464 4129161 4130292 + 102024199 AGCD01049984 MODEL 8947897 protein-coding CUNH13orf46 chromosome unknown C13orf46 homolog NW_004955404 227635 237264 + 102026067 AGCD01003198;GBDF01006237;XM_005373922 XP_005373979 MODEL 8832670 ncrna LOC102026018 uncharacterized LOC102026018 NW_004955495 1270624 1272616 + 102026018 AGCD01061678;GBDF01262339;XR_264132 MODEL 8750062 protein-coding Lsg1 large 60S subunit nuclear export GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN nuclear export (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 14216430 14244289 + 102027531 AGCD01020933;AGCD01020934;GBDF01160483;XM_005383186 XP_005383243 MODEL 8792921 protein-coding Ehbp1l1 EH domain binding protein 1 like 1 INVOLVED IN cell morphogenesis (ortholog); enucleation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN recycling endosome (ortholog) NW_004955422 19670778 19689008 - 102005388 AGCD01023026;AGCD01023027;GBCB01006443;GBDI01078671;XM_005384477;XM_005384478;XM_005384479;XM_005384480;XM_005384481;XM_005384482;XM_005384483;XM_013513864;XM_013513865;XM_013513866;XM_013513867 XP_005384534;XP_005384535;XP_005384536;XP_005384537;XP_005384538;XP_005384539;XP_005384540;XP_013369318;XP_013369319;XP_013369320;XP_013369321 MODEL 730469075 snorna SNORA64 Small nucleolar RNA SNORA64/SNORA10 family 8722001 protein-coding Chsy1 chondroitin sulfate synthase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955416 28070981 28136848 - 102019389 AGCD01017623;AGCD01017624;AGCD01017625;GBBH01135196;GBDJ01128858;XM_005381708 XP_005381765 MODEL 8857061 protein-coding LOC102018816 uncharacterized LOC102018816 NW_004955412 18081520 18091575 + 102018816 AGCD01012924;GBDF01160803;XM_013510954;XM_013510955;XM_013510956;XM_013510958;XM_013510959 XP_013366408;XP_013366409;XP_013366410;XP_013366412;XP_013366413 MODEL 9043386 protein-coding F13b coagulation factor XIII B chain INVOLVED IN blood coagulation (ortholog); blood coagulation, fibrin clot formation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH factor XIII deficiency (ortholog); Factor XIII, B Subunit, Deficiency Of (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 33633911 33660506 - 102023224 AGCD01006485;AGCD01006486;GBDF01131030;XM_005375114;XM_005375115;XM_005375116 XP_005375171;XP_005375172;XP_005375173 MODEL 8888670 protein-coding Frat1 FRAT regulator of WNT signaling pathway 1 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); embryonic axis specification (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955507 3472035 3486868 + 102003473 AGCD01065626;AGCD01065627;GBDF01126132;GBDF01128332;XM_013506226 XP_013361680 MODEL 8725557 protein-coding Eml3 EMAP like 3 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); midbody (ortholog) NW_004955599 580203 587268 + 102015584 AGCD01076660;GBCE01002611;XM_013510059;XM_013510060 XP_013365513;XP_013365514 MODEL 8870400 pseudo LOC102011391 dnaJ homolog subfamily B member 6-like NW_004955451 11366508 11386075 + 102011391 AGCD01043350;AGCD01043351;AGCD01043352 MODEL 9052565 ncrna LOC102006753 uncharacterized LOC102006753 NW_004955463 9484775 9495936 + 102006753 AGCD01049784;AGCD01049785;XR_263163 MODEL 8918691 ncrna LOC102029952 uncharacterized LOC102029952 NW_004955413 25287547 25290767 - 102029952 AGCD01014401;GBDF01226083;XR_260111 MODEL 8939353 pseudo LOC102003534 stAR-related lipid transfer protein 4 pseudogene NW_004955474 6726759 6727385 + 102003534 AGCD01054486;XM_005401390 MODEL 9044923 protein-coding Dynll2 dynein light chain LC8-type 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); scaffold protein binding (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic dynein complex (ortholog) NW_004955451 4929186 4936027 - 102003609 AGCD01043149;GBDJ01011660;XM_005394039 XP_005394096 MODEL 8712518 protein-coding LOC102007913 uncharacterized LOC102007913 NW_004955423 26618752 26622551 + 102007913 AGCD01024102;AGCD01024103;GBDF01148474;XM_005385372 XP_005385429 MODEL 8828098 protein-coding Rab37 RAB37, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); regulation of eye photoreceptor cell development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); photoreceptor connecting cilium (ortholog); secretory granule (ortholog) NW_004955553 1580234 1638290 + 102010638 AGCD01072892;AGCD01072893;GBDJ01241647;XM_005412240;XM_005412241;XM_005412242;XM_005412243;XM_013508642 XP_005412297;XP_005412298;XP_005412299;XP_005412300;XP_013364096 MODEL 39131602 rrna 5S_rRNA 5S ribosomal RNA 8922323 protein-coding Dhrs13 dehydrogenase/reductase 13 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955481 4270948 4276774 + 102019500 AGCD01056933;GBDF01146621;XM_005402708 XP_005402765 MODEL 8858850 protein-coding LOC102022152 keratin-associated protein 9-3-like NW_004955451 15443373 15444392 - 102022152 AGCD01043607;XM_005394381 XP_005394438 MODEL 8949887 protein-coding Rhoc ras homolog family member C INVOLVED IN apical junction assembly (ortholog); mitotic cytokinesis (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cleavage furrow (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955435 16115095 16117736 - 102005962 AGCD01033294;GBBH01000714;GBCQ01011782;XM_005388967 XP_005389024 MODEL 9060147 protein-coding Tardbp TAR DNA binding protein ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); 3'-UTR-mediated mRNA stabilization (ortholog); amyloid fibril formation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cytoplasm (ortholog); interchromatin granule (ortholog); mitochondrion (ortholog) NW_004955486 2656121 2674808 - 102013088 AGCD01059002;AGCD01059003;GBDI01005512;XM_005404010;XM_005404011;XM_013504182;XR_001231105;XR_001231106 XP_005404067;XP_005404068;XP_013359636 MODEL 8901837 protein-coding Tle5 TLE family member 5, transcriptional modulator ENCODES a protein that exhibits identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955495 5328299 5336195 + 102011556 AGCD01062000;GBCE01002154;GBDI01010761;XM_013505260 XP_013360714 MODEL 10214220 ncrna LOC106148597 uncharacterized LOC106148597 NW_004955424 19696999 19701963 - 106148597 AGCD01024833;GBBH01202841;XR_001234198;XR_001234199 MODEL 39133845 misc_rna 7SK 7SK RNA 9051638 protein-coding Ptprh protein tyrosine phosphatase receptor type H ENCODES a protein that exhibits cadherin binding (ortholog); protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); microvillus (ortholog) NW_004955567 992880 1018343 + 102024391 AGCD01074450;AGCD01074451;AGCD01074452;AGCD01074453;GBDK01387246;XM_013509243;XM_013509244;XM_013509245;XR_001232403 XP_013364697;XP_013364698;XP_013364699 MODEL 8802129 pseudo LOC102012667 translationally-controlled tumor protein pseudogene NW_004955502 3634252 3634801 + 102012667 AGCD01064317 MODEL 8774824 ncrna LOC102025330 uncharacterized LOC102025330 NW_004955410 21642542 21670562 - 102025330 AGCD01011064;GBDF01276812;XR_001232740;XR_259855 MODEL 8909475 protein-coding Ddr2 discoidin domain receptor tyrosine kinase 2 ENCODES a protein that exhibits collagen binding (ortholog); protein tyrosine kinase collagen receptor activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to angiotensin (ortholog); ASSOCIATED WITH adenosquamous gallbladder carcinoma (ortholog); alcoholic liver cirrhosis (ortholog); colorectal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955462 13578638 13644834 - 102004790 AGCD01049428;AGCD01049429;AGCD01049430;GBBH01076825;GBDK01239606;XM_013521453 XP_013376907 MODEL 8724722 ncrna LOC102011392 uncharacterized LOC102011392 NW_004955404 682584 698750 + 102011392 AGCD01003207;XR_259283 MODEL 39134393 misc_rna 7SK 7SK RNA 8886301 ncrna LOC102005663 uncharacterized LOC102005663 NW_004955405 42749975 42752628 - 102005663 AGCD01005586;GBDF01179322;XR_259461 MODEL 8817191 pseudo LOC102006386 muskelin-like NW_004955526 3588762 3591143 - 102006386 AGCD01069337 MODEL 8748452 protein-coding Slc25a21 solute carrier family 25 member 21 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial alpha-ketoglutarate transmembrane transport (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 23949794 24421944 + 102023668 AGCD01010074;AGCD01010075;AGCD01010076;AGCD01010077;AGCD01010078;AGCD01010079;AGCD01010080;AGCD01010081;AGCD01010082;AGCD01010083;GBDF01040578;XM_005376906;XM_005376907;XM_013510365;XM_013510366 XP_005376963;XP_005376964;XP_013365819;XP_013365820 MODEL 8791901 ncrna LOC102013066 uncharacterized LOC102013066 NW_004955411 33836261 33840026 + 102013066 AGCD01012375;GBDF01143020;XR_259952 MODEL 39133353 snrna U4 U4 spliceosomal RNA 8813987 ncrna LOC102026020 uncharacterized LOC102026020 NW_004955423 17249611 17260259 - 102026020 AGCD01023851;AGCD01023852;GBDF01050009;XR_260981 MODEL 8958472 protein-coding Xylt2 xylosyltransferase 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); protein xylosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); cataract (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955451 11347254 11354489 - 102011075 AGCD01043349;GBBH01051841;GBDF01249355;XM_013519097;XM_013519098 XP_013374551;XP_013374552 MODEL 8769002 protein-coding Ppp1r3d protein phosphatase 1 regulatory subunit 3D ENCODES a protein that exhibits enzyme binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN regulation of glycogen biosynthetic process (ortholog); regulation of glycogen catabolic process (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; glycogen biosynthetic pathway; glycogen degradation pathway; FOUND IN glycogen granule (ortholog) NW_004955528 3804557 3807309 + 102014282 AGCD01069611;GBBH01225092;XM_013507523 XP_013362977 MODEL 8943106 protein-coding CUNH14orf119 chromosome unknown C14orf119 homolog ASSOCIATED WITH COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 37203604 37206853 - 102024654 AGCD01010498;GBBH01035248;XM_005377092;XM_013510446 XP_005377149;XP_013365900 MODEL 8701002 protein-coding Arpc1b actin related protein 2/3 complex subunit 1B ENCODES a protein that exhibits actin filament binding (ortholog); protein-containing complex binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); response to estradiol (ortholog); response to estrogen (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN Arp2/3 protein complex (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955460 15055753 15069093 + 102007091 AGCD01048767;AGCD01048768;GBBH01000811;GBDF01088644;XM_013521227 XP_013376681 MODEL 8936266 protein-coding LOC102010612 olfactory receptor 10AG1-like NW_004955511 892359 900459 - 102010612 AGCD01066346;XM_005408216 XP_005408273 MODEL 8750177 protein-coding Frat2 FRAT regulator of WNT signaling pathway 2 INVOLVED IN Wnt signaling pathway (ortholog) NW_004955507 3498193 3500240 - 102003789 AGCD01065628;AGCD01065629;GBDF01126133;GBDI01224874;XM_013506227 XP_013361681 MODEL 9059248 ncrna LOC102009427 uncharacterized LOC102009427 NW_004955442 18649285 18656714 - 102009427 AGCD01038012;GBDF01055895;XR_262168 MODEL 8858591 protein-coding Bcorl1 BCL6 corepressor like 1 ASSOCIATED WITH adenoid cystic carcinoma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955473 4990974 5054829 - 102010992 AGCD01053963;AGCD01053964;GBCQ01012577;XM_005401251;XM_005401252;XM_005401253;XM_013523072;XM_013523073;XM_013523074;XM_013523075 XP_005401308;XP_005401309;XP_005401310;XP_013378526;XP_013378527;XP_013378528;XP_013378529 MODEL 8906792 protein-coding Ehd1 EH domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); Disease Progression (ortholog); esophageal cancer (ortholog); FOUND IN ciliary pocket membrane (ortholog); ciliary transition zone (ortholog); cilium (ortholog) NW_004955422 20302409 20324591 + 102027079 AGCD01023074;GBCQ01035903;XM_005384552 XP_005384609 MODEL 8800067 protein-coding Iqcf3 IQ motif containing F3 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog) NW_004955532 3493451 3494864 + 102020840 AGCD01070285;GBDF01001012;XM_005410325 XP_005410382 MODEL 8884158 protein-coding Rasal2 RAS protein activator like 2 INVOLVED IN adipose tissue development (ortholog); gene expression (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955406 17602584 17904611 + 102020977 AGCD01006012;AGCD01006013;AGCD01006014;AGCD01006015;AGCD01006016;GBDF01123106;XM_005374920;XM_005374922;XM_005374926;XM_005374927;XM_013521024;XM_013521034;XM_013521035;XM_013521039;XM_013521043;XM_013521052 XP_005374977;XP_005374979;XP_005374983;XP_005374984;XP_013376478;XP_013376488;XP_013376489;XP_013376493;XP_013376497;XP_013376506 MODEL 39132501 rrna 5S_rRNA 5S ribosomal RNA 8836623 ncrna LOC102029954 uncharacterized LOC102029954 NW_004955414 16743715 16770815 - 102029954 AGCD01015223;AGCD01015224;AGCD01015225;GBDF01221659;XR_001233083 MODEL 8814827 ncrna LOC102003538 uncharacterized LOC102003538 NW_004955476 203227 208111 + 102003538 AGCD01055192;GBDI01270308;XR_263615 MODEL 8954227 protein-coding LOC102003863 protocadherin beta-7 NW_004955415 12610873 12620570 - 102003863 AGCD01016207;AGCD01016208;XM_013512126 XP_013367580 MODEL 8884389 protein-coding Siva1 SIVA1 apoptosis inducing factor ENCODES a protein that exhibits CD27 receptor binding (ortholog); tumor necrosis factor receptor binding (ortholog); virus receptor activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Coxsackievirus Infections (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955538 3197983 3202782 + 102027012 AGCD01071153;GBCB01000476;XM_005410841 XP_005410898 MODEL 10281951 protein-coding LOC106147509 neural Wiskott-Aldrich syndrome protein-like NW_004955570 1658159 1660879 - 106147509 AGCD01074822;GBCQ01087673;XM_013509427 XP_013364881 MODEL 730469387 ribozyme CPEB3_ribozyme Mammalian CPEB3 ribozyme 8816927 protein-coding Dynlrb1 dynein light chain roadblock-type 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to light stimulus (ortholog); visual behavior (ortholog); PARTICIPATES IN mitochondria transport pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955422 26787879 26807901 - 102022713 AGCD01023303;GBCQ01008485;XM_005384828;XM_005384829;XM_005384830 XP_005384885;XP_005384886;XP_005384887 MODEL 8753367 protein-coding Rab38 RAB38, member RAS oncogene family ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); INVOLVED IN endosome to melanosome transport (ortholog); eye pigmentation (ortholog); melanosome assembly (ortholog); ASSOCIATED WITH Albuminuria (ortholog); Hermansky-Pudlak syndrome (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell body (ortholog); early endosome (ortholog); early endosome lumen (ortholog) NW_004955414 5158860 5214108 + 102006016 AGCD01014888;AGCD01014889;GBCQ01095846;XM_005379731 XP_005379788 MODEL 730469250 snorna SNORA64 Small nucleolar RNA SNORA64/SNORA10 family 8727921 protein-coding Dhrs3 dehydrogenase/reductase 3 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cardiac septum morphogenesis (ortholog); negative regulation of retinoic acid receptor signaling pathway (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH craniosynostosis (ortholog); craniosynostosis-scoliosis syndrome (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955486 1439179 1473476 + 102024235 AGCD01058955;AGCD01058956;GBCE01028543;XM_005403948 XP_005404005 MODEL 10138633 ncrna LOC106148598 uncharacterized LOC106148598 NW_004955424 22334086 22358721 + 106148598 AGCD01024961;AGCD01024962;AGCD01024963;AGCD01024964;AGCD01024965;AGCD01024966;GBDF01193053;XR_001234202;XR_001234203 MODEL 8817436 ncrna LOC102018823 uncharacterized LOC102018823 NW_004955472 1375543 1398861 - 102018823 AGCD01053390;GBDF01161710;XR_263542 MODEL 9016445 protein-coding F2 coagulation factor II, thrombin ENCODES a protein that exhibits endopeptidase activity (ortholog); heparin binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); blood coagulation, common pathway (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955422 1356675 1367788 - 102003453 AGCD01022456;GBDI01106150;XM_005384007 XP_005384064 MODEL 9016345 protein-coding Chsy3 chondroitin sulfate synthase 3 ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955415 2748776 2994041 + 102024331 AGCD01015916;AGCD01015917;AGCD01015918;AGCD01015919;AGCD01015920;AGCD01015921;GBCE01168857;GBDF01182882;XM_013512391 XP_013367845 MODEL 8970257 protein-coding LOC102013070 endothelial cell-selective adhesion molecule NW_004955412 25824222 25832315 - 102013070 AGCD01013174;GBBH01227824;XM_005378437 XP_005378494 MODEL 8854321 protein-coding Cap1 cyclase associated actin cytoskeleton regulatory protein 1 INVOLVED IN actin cytoskeleton organization (ortholog); ameboidal-type cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955452 17503530 17528049 + 102004448 AGCD01044558;AGCD01044559;GBDF01010423;XM_005395275;XM_005395276;XM_005395277;XM_013519550 XP_005395332;XP_005395333;XP_005395334;XP_013375004 MODEL 8992767 protein-coding Eml4 EMAP like 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); mitotic metaphase chromosome alignment (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intercellular bridge (ortholog) NW_004955441 9633906 9715866 + 102021802 AGCD01037026;GBDI01081618;XM_013517609;XM_013517610;XR_001235328 XP_013373063;XP_013373064 MODEL 8701590 protein-coding LOC102006758 olfactory receptor 147-like NW_004955412 25230240 25240655 + 102006758 AGCD01013141;XM_005378417;XM_013510987 XP_005378474;XP_013366441 MODEL 8921737 protein-coding Sap18 Sin3A associated protein 18 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); positive regulation of apoptotic process (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN ASAP complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955497 1862026 1869974 + 102010920 AGCD01062478;AGCD01062479;GBBH01031880;GBDF01000571;XM_013505506 XP_013360960 MODEL 9002863 protein-coding Ptprj protein tyrosine phosphatase receptor type J ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); delta-catenin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); blood coagulation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; somatostatin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon carcinoma (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); cell-cell junction (ortholog) NW_004955422 396266 438792 - 102005815 AGCD01022405;AGCD01022406;GBDJ01233455;GBDJ01239540;XM_013514213 XP_013369667 MODEL 8874028 pseudo LOC102024200 phosphoglycerate kinase 1-like NW_004955411 34665490 34723313 - 102024200 AGCD01012414;AGCD01012415 MODEL 9005393 protein-coding LOC102005326 zinc finger protein 271-like NW_004955402 22009497 22049009 + 102005326 AGCD01000595;AGCD01000596;AGCD01000597;AGCD01000598;GBDJ01165251;XM_005372797;XM_005372798;XM_005372799;XM_013509230;XM_013509319;XM_013509375;XM_013509440 XP_005372854;XP_005372855;XP_005372856;XP_013364684;XP_013364773;XP_013364829;XP_013364894 MODEL 39131603 rrna 5S_rRNA 5S ribosomal RNA 39134394 misc_rna 7SK 7SK RNA 8817993 ncrna LOC102011396 uncharacterized LOC102011396 NW_004955405 4622780 4660674 - 102011396 AGCD01004650;GBDF01088044;XR_001235203;XR_001235204 MODEL 8906414 protein-coding Tspyl1 TSPY like 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); gonadal dysgenesis (ortholog); sudden infant death syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955526 539178 552120 + 102011239 AGCD01069240;GBDI01081447;XM_013507351 XP_013362805 MODEL 8802225 protein-coding Ccna2 cyclin A2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell cycle G1/S phase transition (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN G1/S transition pathway; p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Carotid Artery Injuries (ortholog); cervical cancer (ortholog); FOUND IN cyclin A2-CDK1 complex (ortholog); cyclin A2-CDK2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955428 18725969 18732478 + 102018419 AGCD01028069;GBDF01006345;XM_005386783 XP_005386840 MODEL 9067021 protein-coding Polr3f RNA polymerase III subunit F ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); termination of RNA polymerase III transcription (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955415 27022081 27036475 + 102016803 AGCD01016621;AGCD01016622;GBDF01221498;XM_013512230;XM_013512231 XP_013367684;XP_013367685 MODEL 39133355 snrna U4 U4 spliceosomal RNA 8740779 protein-coding Tars1 threonyl-tRNA synthetase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); threonine-tRNA ligase activity (ortholog); INVOLVED IN threonyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955426 19086817 19110609 + 102026550 AGCD01026540;GBDF01159910;XM_013514933 XP_013370387 MODEL 8963787 protein-coding Rhod ras homolog family member D ENCODES a protein that exhibits GTP binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN early endosome (ortholog) NW_004955422 18343611 18353269 - 102026536 AGCD01022946;GBCQ01039817;XM_005384359 XP_005384416 MODEL 8724356 protein-coding LOC102026023 female-specific lacrimal gland protein-like NW_004955499 3047393 3051411 + 102026023 AGCD01063451;XM_005406560 XP_005406617 MODEL 39133846 misc_rna 7SK 7SK RNA 8731983 protein-coding Cpeb4 cytoplasmic polyadenylation element binding protein 4 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to decreased oxygen levels (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955408 26535281 26597317 + 102003416 AGCD01008668;AGCD01008669;GBDI01187363;XM_005376353;XM_005376354;XM_005376356 XP_005376410;XP_005376411;XP_005376413 MODEL 8946993 pseudo LOC102012669 protein slowmo homolog 2-like NW_004955503 6860185 6860772 + 102012669 AGCD01064772 MODEL 39132861 snorna SNORD79 Small nucleolar RNA SNORD79 8970529 protein-coding LOC102025331 cleavage stimulation factor subunit 2 tau variant-like NW_004955462 1290389 1314225 - 102025331 AGCD01049111;AGCD01049112;XM_005398315 XP_005398372 MODEL 8960241 protein-coding Ddrgk1 DDRGK domain containing 1 ENCODES a protein that exhibits ubiquitin-like protein ligase binding (ortholog); UFM1-modified protein reader activity (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); transferase complex (ortholog) NW_004955415 14085404 14098220 - 102024453 AGCD01016284;AGCD01016285;GBCB01023181;XM_005380785 XP_005380842 MODEL 8948621 ncrna LOC102007919 uncharacterized LOC102007919 NW_004955501 6607112 6613567 - 102007919 AGCD01064198;GBDF01156852;XR_264255 MODEL 8895781 protein-coding Frem1 FRAS1 related extracellular matrix 1 INVOLVED IN cell-matrix adhesion (ortholog); craniofacial suture morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arnold-Chiari Malformation (ortholog); autistic disorder (ortholog); FOUND IN basement membrane (ortholog) NW_004955434 17754002 17901416 - 102017693 AGCD01032540;AGCD01032541;AGCD01032542;AGCD01032543;AGCD01032544;GBCQ01113906;XM_005388701;XM_005388702;XM_013516387;XM_013516388;XM_013516389 XP_005388758;XP_005388759;XP_013371841;XP_013371842;XP_013371843 MODEL 8841831 protein-coding Bcr BCR activator of RhoGEF and GTPase ENCODES a protein that exhibits enzyme binding (ortholog); GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); brain development (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955455 7598794 7727386 + 102026502 AGCD01045862;GBDF01188592;GBDI01355626;XM_005396371 XP_005396428 MODEL 8810755 protein-coding Lsm1 LSM1 homolog, mRNA degradation associated ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); negative regulation of neuron differentiation (ortholog); stem cell population maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FICUS syndrome (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955463 13775639 13788784 - 102019988 AGCD01049886;GBCE01152341;XM_005398433;XM_005398434;XM_005398435;XM_005398436 XP_005398490;XP_005398491;XP_005398492;XP_005398493 MODEL 8884105 protein-coding Rasal3 RAS protein activator like 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of Ras protein signal transduction (ortholog); positive regulation of NK T cell proliferation (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of membrane (ortholog); plasma membrane (ortholog) NW_004955495 7795619 7808674 + 102019290 AGCD01062164;AGCD01062165;AGCD01062166;GBCE01135351;GBDK01007096;XM_013505123;XM_013505124 XP_013360577;XP_013360578 MODEL 8977426 pseudo LOC102005328 peroxiredoxin-1 pseudogene NW_004955402 31453916 31455006 + 102005328 AGCD01000789 MODEL 8921188 protein-coding Dynlrb2 dynein light chain roadblock-type 2 PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic dynein complex (ortholog) NW_004955522 3353087 3364276 + 102027668 AGCD01068381;GBCQ01069321;XM_005409345 XP_005409402 MODEL 8772274 pseudo LOC102011398 ubiquitin-conjugating enzyme E2 D2 pseudogene NW_004955406 14133361 14133789 - 102011398 AGCD01005958 MODEL 39133359 snrna U4 U4 spliceosomal RNA 8735602 protein-coding Rab39a RAB39A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); phagosome acidification (ortholog); phagosome-lysosome fusion (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN autolysosome membrane (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955412 10224074 10240270 + 102004366 AGCD01012762;GBDF01262894;XM_013510971 XP_013366425 MODEL 8768356 protein-coding LOC102009432 olfactory receptor 7G2-like NW_004955563 246588 247514 + 102009432 AGCD01074056;XM_005413197 XP_005413254 MODEL 8785220 protein-coding F2r coagulation factor II thrombin receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN cell-cell junction maintenance (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); establishment of synaptic specificity at neuromuscular junction (ortholog); PARTICIPATES IN G protein mediated signaling pathway; protease mediated signaling via protease-activated receptor 1; ASSOCIATED WITH brain edema (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); early endosome (ortholog) NW_004955425 24144905 24164498 - 102020935 AGCD01025878;AGCD01025879;GBDI01187951;XM_005386038 XP_005386095 MODEL 8989529 protein-coding Iqcf6 IQ motif containing F6 NW_004955532 3363575 3364276 - 102019199 AGCD01070279;GBDF01001665;XM_005410322 XP_005410379 MODEL 9030355 ncrna LOC102006393 uncharacterized LOC102006393 NW_004955439 11260396 11262507 + 102006393 AGCD01035896;GBBH01057642;XR_261980 MODEL 8708722 protein-coding LOC102022153 uncharacterized LOC102022153 NW_004955403 379285 396291 - 102022153 AGCD01001691;GBDI01039089;XM_013511757 XP_013367211 MODEL 8961284 protein-coding Tle6 TLE family member 6, subcortical maternal complex member ENCODES a protein that exhibits structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN actin filament organization (ortholog); embryonic process involved in female pregnancy (ortholog); endoplasmic reticulum localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic lattice (ortholog) NW_004955495 5367237 5369601 - 102011885 AGCD01062002;GBDF01076043;XM_013505057 XP_013360511 MODEL 8960550 protein-coding Eml5 EMAP like 5 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955438 11225910 11366996 - 102010307 AGCD01035231;AGCD01035232;AGCD01035233;AGCD01035234;AGCD01035235;GBBH01176854;GBDK01223254;XM_013517167 XP_013372621 MODEL 8826401 protein-coding LOC102003539 protocadherin beta-10 NW_004955415 12555720 12609335 - 102003539 AGCD01016200;AGCD01016201;AGCD01016202;AGCD01016203;AGCD01016204;AGCD01016205;AGCD01016206;GBCE01115691;GBDF01153200;XM_013512254 XP_013367708 MODEL 39132954 misc_rna Y_RNA Y RNA 8933548 protein-coding Slc25a22 solute carrier family 25 member 22 ENCODES a protein that exhibits amino acid:proton symporter activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955476 11334508 11338781 + 102010254 AGCD01055451;GBBH01118900;GBDF01154109;XM_013502999 XP_013358453 MODEL 39131446 protein-coding F2RL1 F2R like trypsin receptor 1 8711849 protein-coding LOC102003870 eotaxin ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN actin filament organization (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); allergic conjunctivitis (ortholog); allergic disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955481 9017930 9020436 + 102003870 AGCD01057092;GBDF01030595;XM_005402838 XP_005402895 MODEL 8699839 protein-coding Six1 SIX homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aorta morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cellular response to 3,3',5-triiodo-L-thyronine (ortholog); ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 23 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955466 8961597 8966069 + 102016994 AGCD01051010;AGCD01051011;GBDI01084435;XM_005399176 XP_005399233 MODEL 8966638 protein-coding Ptprk protein tyrosine phosphatase receptor type K ENCODES a protein that exhibits beta-catenin binding (ortholog); gamma-catenin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); cellular response to reactive oxygen species (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955436 8975742 9371608 - 102012681 AGCD01033755;AGCD01033756;AGCD01033757;AGCD01033758;AGCD01033759;GBBH01167041;XM_013516643 XP_013372097 MODEL 8904096 protein-coding CUNH14orf39 chromosome unknown C14orf39 homolog INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic cell cycle (ortholog); meiotic DNA double-strand break processing involved in reciprocal meiotic recombination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN central element (ortholog); chromosome (ortholog) NW_004955466 9158022 9194088 + 102017318 AGCD01051030;GBDF01251571;XM_013521883 XP_013377337 MODEL 8816567 pseudo LOC102010616 60S ribosomal protein L28 pseudogene NW_004955516 3854520 3859651 - 102010616 AGCD01067515 MODEL 8727485 protein-coding Tspyl2 TSPY like 2 INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Endometrial Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955475 160768 167359 + 102010477 AGCD01054680;GBBH01208279;XM_005401476 XP_005401533 MODEL 8890797 protein-coding LOC102018824 NACHT, LRR and PYD domains-containing protein 10 NW_004955414 23795260 23797298 - 102018824 AGCD01015525;GBDF01034039;XM_013512059 XP_013367513 MODEL 10355199 ncrna LOC106148599 uncharacterized LOC106148599 NW_004955424 15897593 15902326 + 106148599 AGCD01024733;GBBH01204590;XR_001234204 MODEL 8850818 protein-coding Chtf18 chromosome transmission fidelity factor 18 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN cell development (ortholog); male meiotic nuclear division (ortholog); negative regulation of chromosome segregation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955442 16414564 16423386 - 102014715 AGCD01037900;GBDF01192967;XM_005391601;XM_013517865 XP_005391658;XP_013373319 MODEL 9051784 pseudo LOC102005667 uncharacterized LOC102005667 NW_004955454 13267651 13286711 + 102005667 AGCD01045432 MODEL 9060807 pseudo LOC102012670 coiled-coil domain-containing protein 112 pseudogene NW_004955427 341416 343438 - 102012670 AGCD01026827;AGCD01026828 MODEL 8833157 protein-coding Ehd2 EH domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); endocytic recycling (ortholog); endocytosis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN caveola (ortholog); cytosol (ortholog); endosome membrane (ortholog) NW_004955574 1490877 1503651 + 102014187 AGCD01075183;GBDJ01021130;XM_005413883 XP_005413940 MODEL 39132502 rrna 5S_rRNA 5S ribosomal RNA 8794318 protein-coding Cap2 cyclase associated actin cytoskeleton regulatory protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); regulation of modification of postsynaptic actin cytoskeleton (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); dilated cardiomyopathy (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); postsynaptic density (ortholog) NW_004955483 8484427 8602748 - 102023267 AGCD01057837;AGCD01057838;AGCD01057839;GBDI01292666;XM_005403406 XP_005403463 MODEL 8748091 ncrna LOC102029956 uncharacterized LOC102029956 NW_004955470 10576188 10577281 + 102029956 AGCD01052871;GBDF01055047;XR_263492 MODEL 39131969 snorna SNORD81 Small nucleolar RNA SNORD81 39134395 misc_rna 7SK 7SK RNA 8753680 protein-coding Ppp1r3e protein phosphatase 1 regulatory subunit 3E ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of glycogen biosynthetic process (ortholog); regulation of glycogen biosynthetic process (ortholog); regulation of glycogen catabolic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; FOUND IN glycogen granule (ortholog) NW_004955409 37016851 37025125 + 102022055 AGCD01010488;AGCD01010489;GBDF01113415;XM_013510438;XM_013510439 XP_013365892;XP_013365893 MODEL 8844310 protein-coding Frem2 FRAS1 related extracellular matrix 2 INVOLVED IN cell adhesion (ortholog); embryonic digit morphogenesis (ortholog); eye development (ortholog); ASSOCIATED WITH buphthalmos (ortholog); cervical cancer (ortholog); Childhood Schizophrenia (ortholog); FOUND IN basement membrane (ortholog) NW_004955431 7364937 7541419 - 102019832 AGCD01030087;AGCD01030088;AGCD01030089;AGCD01030090;GBCE01060742;XM_005387646 XP_005387703 MODEL 8895308 protein-coding Bcs1l BCS1 ubiquinol-cytochrome c reductase complex chaperone ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH Bjornstad syndrome (ortholog); brain disease (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955453 14762237 14766693 - 102007967 AGCD01044873;GBDK01357365;XM_005395637;XM_005395638;XM_005395639;XM_005395640;XM_013519927;XM_013519928;XM_013519929;XM_013519930 XP_005395694;XP_005395695;XP_005395696;XP_005395697;XP_013375381;XP_013375382;XP_013375383;XP_013375384 MODEL 626189190 snorna SNORA64 Small nucleolar RNA SNORA64/SNORA10 family 8707149 ncrna LOC102005329 uncharacterized LOC102005329 NW_004955602 418672 420204 - 102005329 AGCD01076784;GBDF01158942;XR_265157 MODEL 8993695 protein-coding Dhrs7b dehydrogenase/reductase 7B ENCODES a protein that exhibits acylglycerone-phosphate reductase (NADP+) activity (ortholog); DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); ether lipid biosynthetic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog); nucleus (ortholog) NW_004955577 1071904 1122204 + 102022241 AGCD01075435;AGCD01075436;GBDF01008512;XM_005413986;XM_005413987;XM_013509623 XP_005414043;XP_005414044;XP_013365077 MODEL 39133847 misc_rna 7SK 7SK RNA 8761204 protein-coding Cped1 cadherin like and PC-esterase domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955479 2782057 3039440 + 102007010 AGCD01056282;AGCD01056283;AGCD01056284;AGCD01056285;AGCD01056286;AGCD01056287;AGCD01056288;AGCD01056289;GBCE01065059;XM_005402311;XM_005402312;XR_001230879 XP_005402368;XP_005402369 MODEL 9021138 protein-coding Rhof ras homolog family member F, filopodia associated INVOLVED IN actin filament organization (ortholog) NW_004955482 6631327 6643634 + 102003447 AGCD01057408;AGCD01057409;GBBH01188779;GBDF01044096;XM_005403257 XP_005403314 MODEL 8701060 pseudo LOC102011405 chromodomain Y-like protein pseudogene NW_004955407 28152182 28153855 - 102011405 AGCD01007576 MODEL 39133360 snrna U4 U4 spliceosomal RNA 8717200 protein-coding LOC102009434 zinc finger protein 709-like NW_004955569 187430 209724 + 102009434 AGCD01074566;GBDF01011185;XM_013509367 XP_013364821 MODEL 8759321 protein-coding Rab39b RAB39B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); myosin V binding (ortholog); INVOLVED IN regulation of autophagy (ortholog); synapse organization (ortholog); vesicle-mediated transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); Developmental Disabilities (ortholog); FOUND IN autolysosome membrane (ortholog); cytoplasmic vesicle membrane (ortholog); Golgi apparatus (ortholog) NW_004955594 424642 431009 + 102023416 AGCD01076427;GBBH01210155;XM_005414644 XP_005414701 MODEL 8969212 protein-coding Ddt D-dopachrome tautomerase ENCODES a protein that exhibits cytokine receptor binding (ortholog); D-dopachrome decarboxylase activity (ortholog); phenylpyruvate tautomerase activity (ortholog); INVOLVED IN negative regulation of macrophage chemotaxis (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of inflammatory response (ortholog); FOUND IN extracellular region (ortholog) NW_004955455 10479409 10481080 - 102004038 AGCD01045956;GBDF01000134;XM_005396485 XP_005396542 MODEL 39131604 rrna 5S_rRNA 5S ribosomal RNA 9011433 protein-coding LOC102024203 histone H2A type 2-B FOUND IN nucleoplasm (ortholog) NW_004955413 863965 864451 + 102024203 AGCD01013492;GBBH01014684;XM_005378715 XP_005378772 MODEL 9004062 protein-coding LOC102018831 olfactory receptor 2T29-like NW_004955418 29690201 29788835 - 102018831 AGCD01019480;AGCD01019481;AGCD01019482;AGCD01019483;GBDJ01253002;XM_005382327;XR_001233550;XR_001233551;XR_001233552;XR_001233553;XR_001233554;XR_260594 XP_005382384 MODEL 8702991 protein-coding LOC102007924 olfactory receptor 5B12-like NW_004955511 3402858 3403802 + 102007924 AGCD01066460;XM_005408265 XP_005408322 MODEL 8952119 protein-coding Ccnb1 cyclin B1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); histone kinase activity (ortholog); patched binding (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); cellular response to iron(III) ion (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cyclin B1-CDK1 complex (ortholog); cytoplasm (ortholog) NW_004955446 140661 149500 - 102009557 AGCD01039929;GBCQ01061201;XM_005392593 XP_005392650 MODEL 8952691 protein-coding Tle7 TLE family member 7 NW_004955484 4138324 4150092 - 102009184 AGCD01058202;AGCD01058203;GBDF01074192;GBDJ01410386;NM_001370855;XM_013503981 NP_001357784;XP_013359435 VALIDATED 8992267 pseudo LOC102003541 60S acidic ribosomal protein P1 pseudogene NW_004955416 7907212 7907681 + 102003541 AGCD01017018;XM_005381274 MODEL 39132955 misc_rna Y_RNA Y RNA 8785865 protein-coding Rasd1 ras related dexamethasone induced 1 INVOLVED IN cellular response to nitric oxide (ortholog); intracellular signaling cassette (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955577 452993 454659 + 102018241 AGCD01075396;GBCB01059855;GBDJ01004132;XM_005413972 XP_005414029 MODEL 8709587 pseudo LOC102026025 elongation factor 1-alpha 1 pseudogene NW_004955425 22371390 22372772 + 102026025 AGCD01025819 MODEL 8981675 protein-coding Tars2 threonyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits aminoacyl-tRNA deacylase activity (ortholog); protein homodimerization activity (ortholog); threonine-tRNA ligase activity (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Ataxia (ortholog); brain disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 300142 314703 - 102012519 AGCD01013457;AGCD01013458;GBDF01087784;XM_005378677 XP_005378734 MODEL 8702359 protein-coding Eml6 EMAP like 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955424 28125287 28461646 - 102014262 AGCD01025147;AGCD01025148;AGCD01025149;AGCD01025150;AGCD01025151;AGCD01025152;AGCD01025153;AGCD01025154;AGCD01025155;AGCD01025156;AGCD01025157;AGCD01025158;AGCD01025159;AGCD01025160;AGCD01025161;AGCD01025162;AGCD01025163;AGCD01025164;AGCD01025165;AGCD01025166;AGCD01025167;AGCD01025168;GBDF01277097;XM_013514622;XM_013514623;XM_013514624;XM_013514625;XM_013514626;XR_001234170 XP_013370076;XP_013370077;XP_013370078;XP_013370079;XP_013370080 MODEL 8978578 ncrna LOC102013074 uncharacterized LOC102013074 NW_004955414 17753092 17757875 - 102013074 AGCD01015251;GBCQ01015489;XR_260179 MODEL 8929315 protein-coding Ppp1r3f protein phosphatase 1 regulatory subunit 3F ENCODES a protein that exhibits glycogen binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN regulation of glycogen biosynthetic process (ortholog); ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); Cognitive Dysfunction (ortholog); FOUND IN membrane (ortholog) NW_004955543 750094 767894 + 102011247 AGCD01071600;GBCB01002712;XM_005411333;XM_005411334 XP_005411390;XP_005411391 MODEL 8834394 pseudo LOC102006759 serum albumin-like NW_004955412 36036768 36051307 + 102006759 AGCD01013427;AGCD01013428;AGCD01013429;AGCD01013430;XM_005378660 MODEL 10323066 ncrna LOC106147510 uncharacterized LOC106147510 NW_004955570 1708736 1730326 - 106147510 AGCD01074826;GBCE01160619;XR_001232433 MODEL 8874968 protein-coding Sap25 Sin3A associated protein 25 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog) NW_004955573 328212 329897 + 102021060 AGCD01074975;GBDI01003810;XM_005413719;XM_005413720;XM_005413721 XP_005413776;XP_005413777;XP_005413778 MODEL 39132506 rrna 5S_rRNA 5S ribosomal RNA 8940493 ncrna LOC102022154 uncharacterized LOC102022154 NW_004955404 2424413 2428084 + 102022154 AGCD01003258;GBDJ01337735;XR_001234589;XR_259290 MODEL 8940625 protein-coding Iqcg IQ motif containing G ENCODES a protein that exhibits calmodulin binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN sperm axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); manchette (ortholog) NW_004955420 11960778 11997807 + 102028971 AGCD01020848;AGCD01020849;GBDF01049203;XM_005383090;XM_013513363;XM_013513364;XM_013513365 XP_005383147;XP_013368817;XP_013368818;XP_013368819 MODEL 39131971 snorna SNORD81 Small nucleolar RNA SNORD81 8933752 protein-coding Polr3g RNA polymerase III subunit G ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cell population proliferation (ortholog); positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955418 21116812 21149818 - 102027072 AGCD01019257;AGCD01019258;AGCD01019259;AGCD01019260;GBDK01321607;XM_005382276;XM_005382277;XM_005382278;XM_005382279;XM_013512972 XP_005382333;XP_005382334;XP_005382335;XP_005382336;XP_013368426 MODEL 8944457 pseudo LOC102003871 transcription and mRNA export factor ENY2 pseudogene NW_004955418 2196164 2198005 - 102003871 AGCD01018751;XM_005382119 MODEL 8951129 protein-coding F2rl1 F2R like trypsin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); cell-cell junction maintenance (ortholog); defense response to virus (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 2; ASSOCIATED WITH asthma (ortholog); chronic obstructive pulmonary disease (ortholog); Experimental Arthritis (ortholog); FOUND IN early endosome (ortholog); plasma membrane (ortholog); pseudopodium (ortholog) NW_004955425 24050901 24054039 - 102027322 AGCD01025874;GBCE01044808;XM_013514910 XP_013370364 MODEL 9010362 pseudo LOC102010625 coiled-coil domain-containing protein 126 pseudogene NW_004955526 455881 456356 + 102010625 AGCD01069233 MODEL 8937564 protein-coding Dynlt1 dynein light chain Tctex-type 1 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); GTP-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN axon development (ortholog); cardiac muscle cell apoptotic process (ortholog); dendrite development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN axonal growth cone (ortholog); cell body (ortholog); cytoplasmic dynein complex (ortholog) NW_004955439 3833525 3842393 + 102011912 AGCD01035690;GBDF01005833;XM_005390519 XP_005390576 MODEL 9025092 protein-coding Ptprm protein tyrosine phosphatase receptor type M ENCODES a protein that exhibits cadherin binding (ortholog); identical protein binding (ortholog); phosphatase activity (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955402 3243447 3756457 - 102030364 AGCD01000098;AGCD01000099;AGCD01000100;AGCD01000101;AGCD01000102;AGCD01000103;GBBH01229558;GBCE01153361;XM_005372618 XP_005372675 MODEL 9034602 protein-coding Tspyl4 TSPY like 4 ASSOCIATED WITH melanoma (ortholog) NW_004955526 562891 567892 + 102011580 AGCD01069241;AGCD01069242;GBBH01061852;GBCB01020779;XM_005409782 XP_005409839 MODEL 150537116 snorna SNORA65 Small nucleolar RNA SNORA65 9053788 ncrna LOC102025333 uncharacterized LOC102025333 NW_004955411 5078610 5095696 - 102025333 AGCD01011593;AGCD01011594;GBDF01153961;XR_259919 MODEL 8936987 pseudo LOC102012671 pescadillo homolog pseudogene NW_004955428 5346972 5362433 + 102012671 AGCD01027708;XR_261310 MODEL 8881814 ncrna LOC102006395 uncharacterized LOC102006395 NW_004955440 17375532 17384121 + 102006395 AGCD01036569;GBDF01080603;XR_262034 MODEL 8818837 protein-coding Tars3 threonyl-tRNA synthetase 3 ENCODES a protein that exhibits threonine-tRNA ligase activity (ortholog); INVOLVED IN threonyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955416 28509229 28554050 - 102020007 AGCD01017630;AGCD01017631;AGCD01017632;GBCE01179632;GBDK01432440;XM_013512618 XP_013368072 MODEL 8877694 protein-coding Capg capping actin protein, gelsolin like ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); Flemming body (ortholog) NW_004955424 2064672 2080192 + 102003781 AGCD01024262;GBCE01000802;XM_005385432;XM_005385433;XM_005385434;XM_005385435 XP_005385489;XP_005385490;XP_005385491;XP_005385492 MODEL 9044486 protein-coding Cplane1 ciliogenesis and planar polarity effector complex subunit 1 INVOLVED IN cardiac septum development (ortholog); cerebellum development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN ciliary transition zone (ortholog) NW_004955426 21867876 21991889 - 102014378 AGCD01026597;AGCD01026598;AGCD01026599;AGCD01026600;AGCD01026601;GBDF01004778;GBDF01004782;XM_013514957;XM_013514958;XM_013514959 XP_013370411;XP_013370412;XP_013370413 MODEL 8712275 protein-coding Ehd3 EH domain containing 3 INVOLVED IN cilium assembly (ortholog); early endosome to Golgi transport (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN ciliary pocket membrane (ortholog); ciliary transition zone (ortholog); cilium (ortholog) NW_004955469 12953800 12984296 + 102023575 AGCD01052589;AGCD01052590;GBDK01084893;XM_005400561 XP_005400618 MODEL 8990662 protein-coding Lsm10 LSM10, U7 small nuclear RNA associated ENCODES a protein that exhibits histone pre-mRNA DCP binding (ortholog); U7 snRNA binding (ortholog); INVOLVED IN positive regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN Cajal body (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955452 14354020 14358867 - 102005216 AGCD01044466;GBDI01220071;XM_005395190;XM_005395191;XM_005395192;XM_013519572 XP_005395247;XP_005395248;XP_005395249;XP_013375026 MODEL 8986621 protein-coding CUNH14orf93 chromosome unknown C14orf93 homolog INVOLVED IN cell differentiation (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955409 37290615 37315297 + 102026405 AGCD01010506;AGCD01010507;GBDI01355317;XM_005377097;XM_005377098 XP_005377154;XP_005377155 MODEL 39131605 rrna 5S_rRNA 5S ribosomal RNA 39134396 misc_rna 7SK 7SK RNA 8783366 protein-coding Slc25a23 solute carrier family 25 member 23 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP:phosphate antiporter activity (ortholog); INVOLVED IN adenine nucleotide transport (ortholog); calcium import into the mitochondrion (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955495 3155024 3171279 + 102004728 AGCD01061828;AGCD01061829;AGCD01061830;AGCD01061831;GBBH01117839;GBDI01080406;XM_013505307 XP_013360761 MODEL 8966608 protein-coding Ddx1 DEAD-box helicase 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); chromatin binding (ortholog); DNA/RNA helicase activity (ortholog); INVOLVED IN double-strand break repair (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of myeloid dendritic cell cytokine production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cleavage body (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955487 9085950 9117599 + 102012333 AGCD01059450;AGCD01059451;GBDF01005751;XM_005404443 XP_005404500 MODEL 9052304 protein-coding Bdh1 3-hydroxybutyrate dehydrogenase 1 ENCODES a protein that exhibits 3-hydroxybutyrate dehydrogenase activity (ortholog); phospholipid binding (ortholog); INVOLVED IN adipose tissue development (ortholog); ketone biosynthetic process (ortholog); ketone catabolic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ketone bodies metabolic pathway; succinyl-CoA:3-oxoacid transferase deficiency pathway; ASSOCIATED WITH cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955420 13454379 13486700 - 102023364 AGCD01020922;AGCD01020923;GBCB01044106;XM_005383174;XM_005383176 XP_005383231;XP_005383233 MODEL 39132932 misc_rna Y_RNA Y RNA 8762681 protein-coding LOC102005330 uncharacterized LOC102005330 NW_004955637 38088 43799 + 102005330 AGCD01077644;AGCD01077645;XM_005415045 XP_005415102 MODEL 8815556 protein-coding LOC102003872 olfactory receptor 1A1-like NW_004955481 248188 249135 + 102003872 AGCD01056784;XM_005402915 XP_005402972 MODEL 10135397 pseudo LOC106148600 60S ribosomal protein L39 pseudogene NW_004955403 51524279 51524434 + 106148600 AGCD01002992 MODEL 39133848 misc_rna 7SK 7SK RNA 8922679 protein-coding Ppp1r3g protein phosphatase 1 regulatory subunit 3G ENCODES a protein that exhibits glycogen binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); positive regulation of glycogen biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); protein phosphatase type 1 complex (ortholog) NW_004955465 8485273 8488181 - 102023127 AGCD01050474;AGCD01050475;GBBH01188992;GBDK01306249;XM_013521768 XP_013377222 MODEL 8740216 protein-coding LOC102029959 olfactory receptor 13H1 NW_004955473 3409954 3410879 - 102029959 AGCD01053933;XM_013523051 XP_013378505 MODEL 8982276 ncrna LOC102005668 uncharacterized LOC102005668 NW_004955408 4130103 4136421 + 102005668 AGCD01008089;GBDF01241145;XR_259658 MODEL 8825724 protein-coding LOC102011407 olfactory receptor 9K2-like NW_004955458 2281743 2282727 + 102011407 AGCD01047223;XM_013520797 XP_013376251 MODEL 8856865 protein-coding Rhog ras homolog family member G ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell chemotaxis (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Common Variable Immunodeficiency 15 (ortholog); exanthem (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955414 19630564 19641722 - 102010894 AGCD01015326;GBCE01032932;XM_005380036;XM_005380037 XP_005380093;XP_005380094 MODEL 8805080 protein-coding Arpc2 actin related protein 2/3 complex subunit 2 ENCODES a protein that exhibits actin filament binding (ortholog); AP-1 adaptor complex binding (ortholog); Arp2/3 complex binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN actin filament branch point (ortholog); apical dendrite (ortholog); Arp2/3 protein complex (ortholog) NW_004955453 15117978 15145895 - 102014864 AGCD01044885;GBDF01007865;XM_005395662;XM_005395663 XP_005395719;XP_005395720 MODEL 8962602 protein-coding LOC102009437 uncharacterized LOC102009437 NW_004955447 15549581 15578315 + 102009437 AGCD01041059;AGCD01041060;GBBH01122934;XM_013518483 XP_013373937 MODEL 8929664 protein-coding Rab3a RAB3A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); G protein activity (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); axonogenesis (ortholog); calcium-ion regulated exocytosis (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); endosome (ortholog) NW_004955524 3220108 3224376 + 102019948 AGCD01068867;AGCD01068868;GBDF01156150;XM_005409562 XP_005409619 MODEL 8775663 protein-coding Six2 SIX homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); chronic kidney disease (ortholog); cleft palate (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955441 12029530 12033214 - 102008033 AGCD01037116;GBBH01030680;GBCB01005025;XM_005390965 XP_005391022 MODEL 9065587 protein-coding LOC102006400 galactoside 2-alpha-L-fucosyltransferase 2-like NW_004955559 1877285 1894905 - 102006400 AGCD01073677;AGCD01073678;GBDF01145381;XM_005412939 XP_005412996 MODEL 8845906 protein-coding LOC102022156 cytochrome c-like NW_004955405 15750007 15750318 - 102022156 AGCD01004951;XM_005374685 XP_005374742 MODEL 39131973 snorna SNORD81 Small nucleolar RNA SNORD81 8701327 ncrna LOC102018834 uncharacterized LOC102018834 NW_004955485 1420370 1427704 - 102018834 AGCD01058479;GBCE01148220;XR_263904 MODEL 8812046 protein-coding Capn1 calpain 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); mammary gland involution (ortholog); negative regulation of actin filament polymerization (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); aortic atherosclerosis (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 20006448 20026984 - 102014143 AGCD01023057;GBDJ01022899;XM_005384508;XM_005384509 XP_005384565;XP_005384566 MODEL 8754720 pseudo LOC102003544 arfaptin-1 pseudogene NW_004955416 645573 646813 - 102003544 AGCD01016816 MODEL 39134397 misc_rna 7SK 7SK RNA 8777213 protein-coding Tlk1 tousled like kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN SNARE complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955449 3694624 3840468 + 102022033 AGCD01041863;AGCD01041864;AGCD01041865;AGCD01041866;AGCD01041867;AGCD01041868;GBDK01190119;XM_005393240 XP_005393297 MODEL 8989701 protein-coding LOC102026028 cytochrome P450 2E1 ENCODES a protein that exhibits 4-nitrophenol 2-monooxygenase activity (ortholog); enzyme binding (ortholog); heme binding (ortholog); INVOLVED IN 4-nitrophenol metabolic process (ortholog); lipid hydroxylation (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955507 6293162 6303255 - 102026028 AGCD01065703;GBDJ01062841;XM_005407704 XP_005407761 MODEL 8928033 protein-coding LOC102013077 olfactory receptor 6-like NW_004955414 22675950 22676894 - 102013077 AGCD01015469;XM_005380510 XP_005380567 MODEL 8870296 protein-coding Ddx10 DEAD-box helicase 10 INVOLVED IN anterior head development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955412 10747642 11008039 + 102007871 AGCD01012785;AGCD01012786;AGCD01012787;GBDI01262879;XM_005378043 XP_005378100 MODEL 10338025 ncrna LOC106147511 uncharacterized LOC106147511 NW_004955408 26157766 26248441 + 106147511 AGCD01008663;AGCD01008664;AGCD01008665;AGCD01008666;GBDJ01034794;XR_001232434;XR_001232437 MODEL 9018778 pseudo LOC102012675 uncharacterized LOC102012675 NW_004955429 6718846 6761193 + 102012675 AGCD01028560;AGCD01028561;AGCD01028562;AGCD01028563;AGCD01028564 MODEL 9041449 ncrna LOC102025336 uncharacterized LOC102025336 NW_004955467 5045268 5051230 + 102025336 AGCD01051380;GBDF01145414;XR_263335;XR_263336 MODEL 8715785 protein-coding Sap30 Sin3A associated protein 30 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); melanoma (ortholog); FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 33633028 33639271 - 102026062 AGCD01002457;AGCD01002458;GBBH01076242;GBDF01154171;XM_013513303 XP_013368757 MODEL 8813610 protein-coding Ehd4 EH domain containing 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to growth factor stimulus (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN adherens junction (ortholog); early endosome membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955416 8686709 8758096 - 102016380 AGCD01017065;AGCD01017066;GBCQ01006474;GBDJ01135715;XM_005381320 XP_005381377 MODEL 8996714 protein-coding Ccnb1ip1 cyclin B1 interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN blastocyst formation (ortholog); chiasma assembly (ortholog); reciprocal meiotic recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); lung cancer (ortholog); FOUND IN condensed nuclear chromosome (ortholog); synaptonemal complex (ortholog) NW_004955550 1108764 1138862 - 102021602 AGCD01072549;AGCD01072550;AGCD01072551;GBDK01013864;XM_005412050;XM_005412057;XM_005412059;XM_013508561;XM_013508562;XM_013508563;XM_013508564;XM_013508565;XM_013508566;XM_013508567;XM_013508568 XP_005412107;XP_005412114;XP_005412116;XP_013364015;XP_013364016;XP_013364017;XP_013364018;XP_013364019;XP_013364020;XP_013364021;XP_013364022 MODEL 8756057 protein-coding Chtf8 chromosome transmission fidelity factor 8 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); nucleus (ortholog) NW_004955484 7539887 7542395 + 102004606 AGCD01058337;GBCE01097337;XM_013503977 XP_013359431 MODEL 8966292 protein-coding Emp1 epithelial membrane protein 1 INVOLVED IN apoptotic process (ortholog); bleb assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 10062621 10081551 + 102022803 AGCD01013925;GBCE01001043;XM_005378983 XP_005379040 MODEL 8790518 pseudo LOC102010631 ras-related protein Rab-18 pseudogene NW_004955438 11389072 11389615 - 102010631 AGCD01035237 MODEL 39132457 snorna SNORD82 Small nucleolar RNA SNORD82 8849685 protein-coding LOC102006768 uncharacterized LOC102006768 NW_004955415 15273704 15346189 - 102006768 AGCD01016337;AGCD01016338;XM_013512130 XP_013367584 MODEL 39133361 snrna U4 U4 spliceosomal RNA 730469555 snorna SNORA65 Small nucleolar RNA SNORA65 8943228 protein-coding Dhrs7c dehydrogenase/reductase 7C ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN D-glucose import across plasma membrane (ortholog); intracellular calcium ion homeostasis (ortholog); regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); FOUND IN longitudinal sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) NW_004955467 7330267 7341897 + 102008610 AGCD01051433;GBDI01135172;XM_005399376 XP_005399433 MODEL 8988144 ncrna LOC102005333 uncharacterized LOC102005333 NW_004955452 11263904 11270100 + 102005333 AGCD01044333;GBDJ01321809;XR_001236063;XR_262678 MODEL 9010883 protein-coding Tspyl5 TSPY like 5 INVOLVED IN cellular response to gamma radiation (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog) NW_004955417 13133655 13136768 - 102008102 AGCD01018171;XM_005381841 XP_005381898 MODEL 8965566 protein-coding Dynlt2 dynein light chain Tctex-type 2 INVOLVED IN microtubule-based movement (ortholog); FOUND IN cytoplasmic dynein complex (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955411 3866312 3903862 + 102020225 AGCD01011556;AGCD01011557;AGCD01011558;AGCD01011559;AGCD01011560;AGCD01011561;GBDF01080138;XM_005377635 XP_005377692 MODEL 39132159 rrna 5S_rRNA 5S ribosomal RNA 8810332 protein-coding LOC102029960 uncharacterized LOC102029960 NW_004955415 32153673 32159469 - 102029960 AGCD01016712;GBDJ01268706;XM_005381056;XR_001233204 XP_005381113 MODEL 8830541 ncrna LOC102005676 uncharacterized LOC102005676 NW_004955460 10833953 10838057 + 102005676 AGCD01048618;AGCD01048619;GBDI01033534;XR_263054 MODEL 8817573 protein-coding Iqch IQ motif containing H INVOLVED IN gene expression (ortholog); lncRNA transcription (ortholog); single fertilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog) NW_004955450 8496190 8694810 - 102025640 AGCD01042566;AGCD01042567;AGCD01042568;AGCD01042569;AGCD01042570;AGCD01042571;AGCD01042572;AGCD01042573;AGCD01042574;AGCD01042575;GBBH01073913;XM_013518930;XM_013518931 XP_013374384;XP_013374385 MODEL 8699698 protein-coding LOC102011408 zinc finger protein 354A NW_004955408 1675669 1691620 + 102011408 AGCD01007971;AGCD01007972;AGCD01007973;GBCB01038314;GBCB01038318;XM_013507993 XP_013363447 MODEL 8856806 protein-coding Tas1r1 taste 1 receptor member 1 ENCODES a protein that exhibits taste receptor activity (ortholog); INVOLVED IN sensory perception of umami taste (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955486 6056501 6065038 - 102007774 AGCD01059105;AGCD01059106;GBBH01067179;XM_005404078 XP_005404135 MODEL 8721022 pseudo LOC102009438 nucleobindin-2 pseudogene NW_004955580 212934 215509 + 102009438 AGCD01075591 MODEL 39131606 rrna 5S_rRNA 5S ribosomal RNA 8722909 protein-coding Arpc3 actin related protein 2/3 complex subunit 3 ENCODES a protein that exhibits actin filament binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); cellular response to nerve growth factor stimulus (ortholog); regulation of synaptic vesicle endocytosis (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); diabetes mellitus (ortholog); esophageal cancer (ortholog); FOUND IN Arp2/3 protein complex (ortholog); cell leading edge (ortholog); filamentous actin (ortholog) NW_004955482 7350456 7364266 - 102021012 AGCD01057459;AGCD01057460;GBCE01029082;XM_005403143 XP_005403200 MODEL 8980364 protein-coding Rab3b RAB3B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP-dependent protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); positive regulation of dopamine uptake involved in synaptic transmission (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dopaminergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955464 7117908 7177138 + 102023566 AGCD01050053;AGCD01050054;AGCD01050055;GBCQ01044089;XM_005398596;XM_005398597 XP_005398653;XP_005398654 MODEL 8877455 protein-coding F2rl2 coagulation factor II thrombin receptor like 2 ENCODES a protein that exhibits proteinase-activated receptor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; protease mediated signaling via protease-activated receptor 3; FOUND IN apical plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955425 24246333 24254887 + 102021260 AGCD01025883;GBDK01113155;XM_005386039 XP_005386096 MODEL 9013998 protein-coding Rasd2 RASD family member 2 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); GTP binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN locomotory behavior (ortholog); negative regulation of protein ubiquitination (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 43191530 43196057 + 102009248 AGCD01005602;GBCE01039258;GBDF01077051;XM_005374667 XP_005374724 MODEL 8790591 protein-coding Bdh2 3-hydroxybutyrate dehydrogenase 2 ENCODES a protein that exhibits 3-hydroxybutyrate dehydrogenase activity (ortholog); 4-oxoproline reductase activity (ortholog); NAD binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fatty acid beta-oxidation (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955496 5518403 5534325 + 102012338 AGCD01062355;XM_005406232 XP_005406289 MODEL 8758420 pseudo LOC102018835 transcription elongation factor B polypeptide 2-like NW_004955487 5499289 5500133 - 102018835 AGCD01059338 MODEL 39132941 misc_rna Y_RNA Y RNA 8965456 protein-coding Frey1 Frey regulator of sperm-oocyte fusion 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); gene expression (ortholog); maintenance of protein localization in endoplasmic reticulum (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955422 2063253 2063942 + 102017781 AGCD01022478;GBDF01046819;XM_005384062 XP_005384119 MODEL 8881084 pseudo LOC102003873 40S ribosomal protein S18 pseudogene NW_004955418 24453774 24454252 - 102003873 AGCD01019333 MODEL 8800978 ncrna LOC102026040 uncharacterized LOC102026040 NW_004955436 13438968 13446439 + 102026040 AGCD01033858;GBDF01010335;XR_261789 MODEL 8987338 pseudo LOC102024206 serine/Arginine-related protein 53 pseudogene NW_004955468 1620295 1621668 + 102024206 AGCD01051778 MODEL 8860777 protein-coding Ppp1r42 protein phosphatase 1 regulatory subunit 42 ENCODES a protein that exhibits actin binding (ortholog); dynein complex binding (ortholog); tubulin binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN centrosome (ortholog); manchette (ortholog); microtubule cytoskeleton (ortholog) NW_004955444 12255381 12294605 + 102012136 AGCD01039067;GBDF01008759;XM_005392137;XM_005392138;XM_013518133 XP_005392194;XP_005392195;XP_013373587 MODEL 8701661 pseudo LOC102007925 calmodulin-A pseudogene NW_004955430 14879789 14880358 + 102007925 AGCD01029580;XM_005387538 MODEL 8842406 protein-coding Tsr1 TSR1 ribosome maturation factor ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955481 907441 919613 + 102010367 AGCD01056816;GBDF01127365;XM_005402590 XP_005402647 MODEL 8821472 protein-coding Rhoh ras homolog family member H ENCODES a protein that exhibits GTP binding (ortholog); kinase inhibitor activity (ortholog); INVOLVED IN mast cell activation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of T cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); coronin-1A deficiency (ortholog); FOUND IN cytoplasm (ortholog); immunological synapse (ortholog); plasma membrane (ortholog) NW_004955443 7227751 7269984 - 102019443 AGCD01038274;AGCD01038275;GBBH01183545;XM_005391959;XM_005391960;XM_005391961;XM_005391962;XM_013518115;XM_013518116 XP_005392016;XP_005392017;XP_005392018;XP_005392019;XP_013373569;XP_013373570 MODEL 10103913 protein-coding Iqcj IQ motif containing J NW_004955448 9937259 10186659 + 106149540 AGCD01041485;AGCD01041486;AGCD01041487;GBDF01122827;XM_013518667;XM_013518668;XM_013518669;XM_013518670;XM_013518671;XM_013518672;XM_013518673 XP_013374121;XP_013374122;XP_013374123;XP_013374124;XP_013374125;XP_013374126;XP_013374127 MODEL 8914371 protein-coding LOC102022164 transmembrane protein 198-like NW_004955458 3467969 3473114 + 102022164 AGCD01047303;GBDF01188087;XM_005397262;XM_005397264 XP_005397319;XP_005397321 MODEL 9059415 protein-coding Slc25a24 solute carrier family 25 member 24 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN adenine nucleotide transport (ortholog); cellular response to calcium ion (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); dementia (ortholog); Dwarfism (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) NW_004955435 11895475 11933153 - 102017695 AGCD01033126;GBCQ01062812;XM_005388827;XM_013516545 XP_005388884;XP_013371999 MODEL 39134398 misc_rna 7SK 7SK RNA 8809986 protein-coding Capn10 calpain 10 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cellular response to insulin stimulus (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955542 874083 885085 - 102015768 AGCD01071481;GBDF01159703;XM_005411155;XM_013508102 XP_005411212;XP_013363556 MODEL 8857631 protein-coding Ehf ETS homologous factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN endothelial tube formation (ortholog); epithelial cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); asthma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 11599245 11640828 - 102014792 AGCD01022763;GBCQ01062677;XM_013514292;XM_013514293 XP_013369746;XP_013369747 MODEL 8806369 ncrna LOC102003546 uncharacterized LOC102003546 NW_004955417 24120365 24129898 + 102003546 AGCD01018453;GBDJ01104441;XR_260489 MODEL 8719291 pseudo LOC102013084 cyclic AMP-dependent transcription factor ATF-4 pseudogene NW_004955417 10565016 10567924 - 102013084 AGCD01018079 MODEL 8894513 protein-coding Tlk2 tousled like kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); nucleus localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN intermediate filament (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955478 9100863 9229448 - 102007009 AGCD01056054;AGCD01056055;GBDF01084206;GBDK01189111;XM_013503135 XP_013358589 MODEL 10328636 pseudo LOC106148601 40S ribosomal protein S15 pseudogene NW_004955424 13958505 13970001 - 106148601 AGCD01024640 MODEL 730469458 snorna SNORA65 Small nucleolar RNA SNORA65 10301193 ncrna LOC106147512 uncharacterized LOC106147512 NW_004955571 789881 832257 + 106147512 AGCD01074860;GBBH01171690;XR_001232438 MODEL 8733717 protein-coding Dynlt2b dynein light chain Tctex-type 2B ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary base (ortholog) NW_004955420 12515195 12528863 - 102011449 AGCD01020868;AGCD01020869;AGCD01020870;GBDF01081244;XM_005383130;XM_013513399 XP_005383187;XP_013368853 MODEL 8788954 protein-coding Polr3gl RNA polymerase III subunit GL ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955568 120475 129990 - 102030133 AGCD01074503;GBDJ01234667;XM_005413422;XM_005413423;XM_013509352;XM_013509353 XP_005413479;XP_005413480;XP_013364806;XP_013364807 MODEL 8968484 protein-coding LOC102025337 olfactory receptor 150-like NW_004955412 24941616 24942575 + 102025337 AGCD01013131;XM_005378642 XP_005378699 MODEL 8837278 protein-coding Cplane2 ciliogenesis and planar polarity effector complex subunit 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); cranial skeletal system development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955527 2060063 2064152 + 102029437 AGCD01069421;GBDF01192941;XM_005409837;XM_013507388 XP_005409894;XP_013362842 MODEL 10332758 protein-coding Lsm11 LSM11, U7 small nuclear RNA associated ENCODES a protein that exhibits U7 snRNA binding (ortholog); INVOLVED IN mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of chromatin organization (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 8 (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN histone pre-mRNA 3'end processing complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955408 11871335 11879041 + 106146269 AGCD01008320;GBCE01100505;GBDJ01025182;XM_013508827 XP_013364281 MODEL 8944980 protein-coding LOC102029961 protocadherin gamma-B1 NW_004955415 12422017 12424502 - 102029961 AGCD01016195;AGCD01016196;GBDF01248206;XM_005381124 XP_005381181 MODEL 8940352 protein-coding Sap30bp SAP30 binding protein ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955506 6535566 6574690 - 102016620 AGCD01065430;AGCD01065431;AGCD01065432;GBDI01223301;XM_005407492;XM_005407493;XM_013505977 XP_005407549;XP_005407550;XP_013361431 MODEL 8777594 protein-coding Six3 SIX homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN apoptotic process involved in development (ortholog); brain development (ortholog); camera-type eye development (ortholog); ASSOCIATED WITH genetic disease (ortholog); holoprosencephaly (ortholog); holoprosencephaly 2 (ortholog); FOUND IN nucleus (ortholog) NW_004955441 11966389 11978545 + 102007703 AGCD01037115;AGCD01037116;GBBH01065571;XM_005390963;XM_013517631 XP_005391020;XP_013373085 MODEL 8889468 protein-coding LOC102006403 cytochrome P450 3A9-like NW_004955573 1105990 1253925 - 102006403 AGCD01075020;AGCD01075021;AGCD01075022;AGCD01075023;AGCD01075024;AGCD01075025;AGCD01075026;AGCD01075027;AGCD01075028;AGCD01075029;AGCD01075030;AGCD01075031;AGCD01075032;AGCD01075033;AGCD01075034;GBDJ01045815;XM_005413765;XM_005413766;XM_005413767;XM_005413768 XP_005413822;XP_005413823;XP_005413824;XP_005413825 MODEL 8752224 ncrna LOC102005678 uncharacterized LOC102005678 NW_004955461 3800451 3869319 - 102005678 AGCD01048855;GBDF01224739;XR_001236555;XR_263076;XR_263077 MODEL 8852282 protein-coding CUNH15orf39 chromosome unknown C15orf39 homolog INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955450 2900456 2905748 - 102003077 AGCD01042411;GBDI01216199;XM_013519039 XP_013374493 MODEL 8758264 protein-coding Chtop chromatin target of PRMT1 ENCODES a protein that exhibits methyl-CpG binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); in utero embryonic development (ortholog); mRNA export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); transcription export complex (ortholog) NW_004955545 282342 292428 + 102014495 AGCD01071781;AGCD01071782;GBDJ01010515;XM_005411419;XM_005411421;XM_005411422;XM_005411423;XM_005411424;XM_005411425;XM_013508321;XM_013508322;XM_013508323 XP_005411476;XP_005411478;XP_005411479;XP_005411480;XP_005411481;XP_005411482;XP_013363775;XP_013363776;XP_013363777 MODEL 8803523 protein-coding Arpc4 actin related protein 2/3 complex subunit 4 ENCODES a protein that exhibits actin filament binding (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Acute Otitis Media; Developmental Delay, Language Impairment, and Ocular Abnormalities (ortholog); Down syndrome (ortholog); FOUND IN Arp2/3 protein complex (ortholog); nucleus (ortholog) NW_004955561 1314299 1327300 + 102009661 AGCD01073848;GBCE01001148;XM_005413034 XP_005413091 MODEL 8764356 protein-coding Rasef RAS and EF-hand domain containing ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN zymogen granule exocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955530 690748 747415 + 102012359 AGCD01069863;AGCD01069864;GBBH01098179;XM_013507551;XM_013507552;XM_013507553;XM_013507554;XM_013507555;XM_013507556 XP_013363005;XP_013363006;XP_013363007;XP_013363008;XP_013363009;XP_013363010 MODEL 8968185 ncrna LOC102010634 uncharacterized LOC102010634 NW_004955440 18844372 18859013 - 102010634 AGCD01036623;GBDF01150944;XR_262045 MODEL 9049093 protein-coding Emp2 epithelial membrane protein 2 ENCODES a protein that exhibits integrin binding (ortholog); kinase binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN actin filament organization (ortholog); actin-mediated cell contraction (ortholog); apoptotic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); nephrotic syndrome type 10 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); caveola (ortholog) NW_004955442 7826967 7862035 + 102009227 AGCD01037628;GBCB01040537;XM_005391190 XP_005391247 MODEL 9065087 pseudo LOC102006771 thyroid hormone receptor-associated protein 3-like NW_004955416 9263788 9266478 + 102006771 AGCD01017083 MODEL 39133849 misc_rna 7SK 7SK RNA 8856041 protein-coding Ptprn protein tyrosine phosphatase receptor type N ENCODES a protein that exhibits GTPase binding (ortholog); protein tyrosine phosphatase activity (ortholog); spectrin binding (ortholog); INVOLVED IN dense core granule maturation (ortholog); insulin secretion (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon terminus (ortholog); endosome (ortholog); Golgi apparatus (ortholog) NW_004955453 14126416 14145347 + 102008815 AGCD01044858;GBBH01175455;XM_005395533;XM_005395534;XM_005395537 XP_005395590;XP_005395591;XP_005395594 MODEL 8839501 protein-coding Dhrs9 dehydrogenase/reductase 9 ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); androgen metabolic process (ortholog); progesterone metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Birth Weight (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955449 5360486 5380279 - 102030487 AGCD01041929;GBDF01028240;XM_005393265;XM_013518802 XP_005393322;XP_013374256 MODEL 9011591 protein-coding Ddx11 DEAD/H-box helicase 11 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN cellular response to bleomycin (ortholog); cellular response to cisplatin (ortholog); cellular response to hydroxyurea (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955524 1932988 1957231 + 102004000 AGCD01068787;GBDF01123175;GBDF01123187;XM_013507302;XM_013507303 XP_013362756;XP_013362757 MODEL 8966085 protein-coding LOC102012676 guanylate cyclase soluble subunit beta-2-like NW_004955431 4387868 4457281 - 102012676 AGCD01029996;AGCD01029997;AGCD01029998;AGCD01029999;XM_013515724 XP_013371178 MODEL 8966311 pseudo LOC102024211 tetraspanin-12-like NW_004955469 7511965 7512635 - 102024211 AGCD01052417 MODEL 39132163 rrna 5S_rRNA 5S ribosomal RNA 9065615 protein-coding LOC102007926 ATP-binding cassette sub-family G member 2-like NW_004955433 518685 589650 - 102007926 AGCD01031326;AGCD01031327;AGCD01031328;AGCD01031329;GBDJ01282723;XM_005388161 XP_005388218 MODEL 8825727 pseudo LOC102011411 60S ribosomal protein L18a pseudogene NW_004955459 4048909 4049495 + 102011411 AGCD01048022 MODEL 8806460 ncrna LOC102009439 uncharacterized LOC102009439 NW_004955448 13394879 13451616 + 102009439 AGCD01041588;AGCD01041589;AGCD01041590;AGCD01041591;GBDK01000836;XR_262470 MODEL 39131607 rrna 5S_rRNA 5S ribosomal RNA 8775184 protein-coding Ccnb2 cyclin B2 INVOLVED IN G2/MI transition of meiotic cell cycle (ortholog); in utero embryonic development (ortholog); negative regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 15558874 15587456 - 102013782 AGCD01042795;AGCD01042796;AGCD01042797;GBDF01009616;XM_005393834;XM_013518870 XP_005393891;XP_013374324 MODEL 39132471 snorna SNORD82 Small nucleolar RNA SNORD82 8765999 pseudo LOC102022167 olfactory receptor 6C6-like NW_004955458 2820776 2842036 + 102022167 AGCD01047245;AGCD01047246;AGCD01047247;AGCD01047248;AGCD01047249 MODEL 8828839 protein-coding Bdkrb1 bradykinin receptor B1 ENCODES a protein that exhibits bradykinin receptor activity (ortholog); peptide binding (ortholog); INVOLVED IN cell migration (ortholog); cyclooxygenase pathway (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH Diabetes Complications (ortholog); diabetic angiopathy (ortholog); diabetic neuropathy (ortholog) NW_004955438 16500219 16505394 - 102014289 AGCD01035420;GBDJ01390087;XM_005390373 XP_005390430 MODEL 39132943 misc_rna Y_RNA Y RNA 39133362 snrna U4 U4 spliceosomal RNA 8813340 pseudo LOC102005334 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial pseudogene NW_004955453 2433189 2438637 - 102005334 AGCD01044629 MODEL 9027625 ncrna LOC102003874 uncharacterized LOC102003874 NW_004955482 8396477 8398258 + 102003874 AGCD01057519;GBDF01127761;XR_263850 MODEL 8898798 protein-coding Frk fyn related Src family tyrosine kinase ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); glucose intolerance (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955526 736446 892331 + 102030118 AGCD01069248;AGCD01069249;AGCD01069250;AGCD01069251;AGCD01069252;AGCD01069253;AGCD01069254;GBBH01135063;XM_005409755;XM_005409756;XM_005409757;XM_005409758;XM_005409759 XP_005409812;XP_005409813;XP_005409814;XP_005409815;XP_005409816 MODEL 8809504 pseudo LOC102026041 periphilin-1 pseudogene NW_004955529 485527 486763 - 102026041 AGCD01069639;XM_005410092 MODEL 10211985 ncrna LOC106148602 uncharacterized LOC106148602 NW_004955424 21643439 21652590 - 106148602 AGCD01024902;GBDJ01402020;XR_001234205;XR_001234206 MODEL 8719892 protein-coding Tll1 tolloid like 1 ENCODES a protein that exhibits collagen binding (ortholog); ASSOCIATED WITH atrial heart septal defect 6 (ortholog); cervical cancer (ortholog); congenital heart disease (ortholog) NW_004955403 39299461 39491638 - 102011072 AGCD01002627;AGCD01002628;AGCD01002629;AGCD01002630;GBCE01123233;GBCQ01016540;XM_005373585 XP_005373642 MODEL 8917437 protein-coding Ppp1r7 protein phosphatase 1 regulatory subunit 7 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog) NW_004955542 520605 539699 - 102011697 AGCD01071474;GBDK01076342;XM_005411141;XM_013508062;XM_013508063;XM_013508064 XP_005411198;XP_013363516;XP_013363517;XP_013363518 MODEL 8869911 protein-coding Tsr2 TSR2 ribosome maturation factor ASSOCIATED WITH Diamond-Blackfan anemia 14 with mandibulofacial dysostosis (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955475 1698926 1703404 + 102022384 AGCD01054758;GBCQ01101886;XM_005401522;XM_013502825 XP_005401579;XP_013358279 MODEL 8904660 protein-coding Tas1r2 taste 1 receptor member 2 ENCODES a protein that exhibits sweet taste receptor activity (ortholog); taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of sweet taste (ortholog); positive regulation of cytokinesis (ortholog); sensory perception of sweet taste (ortholog); FOUND IN G protein-coupled receptor dimeric complex (ortholog); signaling receptor complex (ortholog); sweet taste receptor complex (ortholog) NW_004955527 377269 392833 + 102018219 AGCD01069383;GBDF01112496;XM_013507373 XP_013362827 MODEL 8715843 protein-coding F2rl3 F2R like thrombin or trypsin receptor 3 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN platelet activation (ortholog); platelet aggregation (ortholog); positive regulation of release of sequestered calcium ion into cytosol (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 4; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955524 1045493 1047924 - 102029220 AGCD01068733;GBDF01142310;XM_005409505;XM_005409506 XP_005409562;XP_005409563 MODEL 9066355 pseudo LOC102018836 60S ribosomal protein L9 pseudogene NW_004955421 9029923 9030616 + 102018836 AGCD01021830 MODEL 8961186 pseudo LOC102006405 lupus La protein homolog pseudogene NW_004955449 5976871 5978023 + 102006405 AGCD01041946 MODEL 9003884 protein-coding Rab3c RAB3C, member RAS oncogene family ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); GTPase activity (ortholog); myosin V binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) NW_004955446 9335298 9577919 - 102009894 AGCD01040159;AGCD01040160;AGCD01040161;GBCQ01023934;XM_005392675;XM_013518391;XM_013518392 XP_005392732;XP_013373845;XP_013373846 MODEL 39134399 misc_rna 7SK 7SK RNA 8842155 protein-coding CUNH15orf40 chromosome unknown C15orf40 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955416 13669931 13681991 + 102004067 AGCD01017231;AGCD01017232;GBDF01162166;XM_005381467;XM_013512496;XM_013512497 XP_005381524;XP_013367950;XP_013367951 MODEL 8945233 protein-coding Slc25a25 solute carrier family 25 member 25 ENCODES a protein that exhibits ATP:phosphate antiporter activity (ortholog); INVOLVED IN adipose tissue development (ortholog); ATP metabolic process (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955419 621445 656172 - 102018095 AGCD01019598;AGCD01019599;AGCD01019600;AGCD01019601;GBDF01304569;XM_005382383;XM_005382385;XM_005382387 XP_005382440;XP_005382442;XP_005382444 MODEL 8743704 protein-coding Capn11 calpain 11 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955437 9791021 9804769 + 102016847 AGCD01034543;GBDF01000703;XM_005389797;XM_005389798;XM_005389799;XM_005389800;XM_005389801;XM_005389802 XP_005389854;XP_005389855;XP_005389856;XP_005389857;XP_005389858;XP_005389859 MODEL 8743973 protein-coding LOC102003547 C-C motif chemokine 2 NW_004955481 8954125 8956004 + 102003547 AGCD01057090;GBCE01054732;XM_005402837 XP_005402894 MODEL 8712001 protein-coding Emp3 epithelial membrane protein 3 (MAM blood group) INVOLVED IN apoptotic process (ortholog); bleb assembly (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955559 2117200 2121366 - 102012480 AGCD01073691;GBDJ01005369;XM_005412959;XM_013509045 XP_005413016;XP_013364499 MODEL 8945075 protein-coding Rasgef1a RasGEF domain family member 1A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of Ras protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955546 1304126 1332436 - 102006827 AGCD01072047;AGCD01072048;GBDI01288475;XM_013508392;XM_013508393 XP_013363846;XP_013363847 MODEL 39133850 misc_rna 7SK 7SK RNA 8701050 protein-coding Dhrsx dehydrogenase/reductase X-linked ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); dolichal reductase (NADPH) activity (ortholog); polyprenol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN dolichyl monophosphate biosynthetic process (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Congenital disorder of glycosylation, type 1DD (ortholog); FOUND IN extracellular region (ortholog); lipid droplet (ortholog) NW_004955499 1360636 1471141 - 102010069 AGCD01063348;AGCD01063349;AGCD01063350;AGCD01063351;AGCD01063352;AGCD01063353;AGCD01063354;AGCD01063355;GBCB01024741;GBDF01253653;XM_005406518;XM_013505592 XP_005406575;XP_013361046 MODEL 8988877 protein-coding LOC102029964 olfactory receptor 4F15-like NW_004955416 45218 50502 + 102029964 AGCD01016765;XM_005381683 XP_005381740 MODEL 8860960 protein-coding Polr3h RNA polymerase III subunit H ENCODES a protein that exhibits DNA-directed RNA polymerase activity (ortholog); INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH asthma (ortholog); choreatic disease (ortholog); Deglutition Disorders (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 27065785 27072432 - 102018585 AGCD01014491;GBDF01289959;XM_005379351;XM_013511356;XM_013511357 XP_005379408;XP_013366810;XP_013366811 MODEL 8922348 pseudo LOC102024212 ubiquitin-fold modifier 1 pseudogene NW_004955470 1453839 1454161 + 102024212 AGCD01052641;XM_005400594 MODEL 8743540 protein-coding Cplx1 complexin 1 ENCODES a protein that exhibits lipid binding (ortholog); SNARE binding (ortholog); INVOLVED IN insulin secretion (ortholog); regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); ASSOCIATED WITH Ataxia (ortholog); bipolar disorder (ortholog); developmental and epileptic encephalopathy 63 (ortholog); FOUND IN calyx of Held (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955514 359174 376916 - 102008249 AGCD01067008;GBCQ01034253;XM_005408677 XP_005408734 MODEL 8716171 protein-coding Iqck IQ motif containing K ASSOCIATED WITH Alzheimer's disease (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 3428245 3548718 + 102011363 AGCD01037506;AGCD01037507;GBDF01043787;XM_005391117 XP_005391174 MODEL 9066134 ncrna LOC102005685 uncharacterized LOC102005685 NW_004955412 2045158 2062851 - 102005685 AGCD01012534;GBDF01262267;XR_259966 MODEL 39131608 rrna 5S_rRNA 5S ribosomal RNA 8929040 protein-coding Arpc5 actin related protein 2/3 complex subunit 5 ENCODES a protein that exhibits actin filament binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN actin filament network formation (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); cell migration (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH congenital hypothyroidism (ortholog); Experimental Autoimmune Myasthenia Gravis (ortholog); genetic disease (ortholog); FOUND IN Arp2/3 protein complex (ortholog); endosome (ortholog); glutamatergic synapse (ortholog) NW_004955406 22409239 22418950 - 102027378 AGCD01006157;AGCD01006158;GBDK01008763;XM_005375042;XM_013521537 XP_005375099;XP_013376991 MODEL 8962611 protein-coding LOC102009441 zinc finger protein 211 NW_004955584 469784 476250 + 102009441 AGCD01075942;GBDK01431604;XM_005414361;XM_005414362;XM_005414363;XM_005414365 XP_005414418;XP_005414419;XP_005414420;XP_005414422 MODEL 8861639 protein-coding Ccnb3 cyclin B3 ASSOCIATED WITH autistic disorder (ortholog); esophageal cancer (ortholog); Female Infertility (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955543 1377932 1444327 + 102016850 AGCD01071621;AGCD01071622;GBDF01192859;XM_005411353;XM_005411354;XM_013508133 XP_005411410;XP_005411411;XP_013363587 MODEL 8816956 protein-coding LOC102024213 olfactory receptor 52A5-like NW_004955414 20781739 20782683 - 102024213 AGCD01015389;XM_005380067 XP_005380124 MODEL 39132709 snorna SNORD83 Small nucleolar RNA SNORD83 39132945 misc_rna Y_RNA Y RNA 8853421 pseudo LOC102010635 ubiquitin carboxyl-terminal hydrolase 48-like NW_004955441 3586283 3611712 + 102010635 AGCD01036808;AGCD01036809;AGCD01036810;AGCD01036811;AGCD01036812;AGCD01036813 MODEL 10253427 ncrna LOC106147513 uncharacterized LOC106147513 NW_004955572 1530953 1547959 + 106147513 AGCD01074955;GBDK01401846;XR_001232439 MODEL 8818045 protein-coding Bdkrb2 bradykinin receptor B2 ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); bradykinin receptor activity (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); arachidonate secretion (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); asthma (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) NW_004955438 16514300 16537160 - 102014608 AGCD01035420;AGCD01035421;GBDJ01225170;XM_005390374;XM_005390375 XP_005390431;XP_005390432 MODEL 8907648 protein-coding Dynlt3 dynein light chain Tctex-type 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of mitotic cell cycle (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic dynein complex (ortholog); kinetochore (ortholog); mitotic spindle astral microtubule (ortholog) NW_004955587 828730 838614 - 102012384 AGCD01076070;GBBH01004194;XM_005414452 XP_005414509 MODEL 8749136 protein-coding Ehmt1 euchromatic histone lysine methyltransferase 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); histone H3K27 methyltransferase activity (ortholog); histone H3K9 dimethyltransferase activity (ortholog); INVOLVED IN beige fat cell differentiation (ortholog); brown fat cell differentiation (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acne (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nuclear body (ortholog) NW_004955513 5491446 5642559 + 102017487 AGCD01066974;AGCD01066975;AGCD01066976;AGCD01066977;AGCD01066978;AGCD01066979;GBDF01221034;XM_005408624;XM_005408625;XM_005408626;XM_005408627;XM_005408628;XM_005408629;XM_005408630;XM_005408631;XM_013506658 XP_005408681;XP_005408682;XP_005408683;XP_005408684;XP_005408685;XP_005408686;XP_005408687;XP_005408688;XP_013362112 MODEL 8741495 protein-coding Rhoj ras homolog family member J ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); regulation of cell shape (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); clear cell renal cell carcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955466 6476822 6564890 - 102010140 AGCD01050928;GBBH01186921;XM_005399158 XP_005399215 MODEL 8996352 pseudo LOC102005336 60S ribosomal protein L12-like NW_004955406 7460294 7460841 + 102005336 AGCD01005771 MODEL 8914286 protein-coding Ddx17 DEAD-box helicase 17 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); chromatin DNA binding (ortholog); lncRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); androgen receptor signaling pathway (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 73 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955413 24646317 24664614 - 102019792 AGCD01014373;GBDF01049351;XM_005379258;XM_005379259 XP_005379315;XP_005379316 MODEL 8940553 protein-coding LOC102025342 olfactory receptor 10T2 NW_004955468 10264851 10265798 - 102025342 AGCD01052075;XM_005400149 XP_005400206 MODEL 39132164 rrna 5S_rRNA 5S ribosomal RNA 730469329 misc_rna Six3os1_1 Six3os1 conserved region 1 8863986 protein-coding Frmd3 FERM domain containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Chloracne (ortholog) NW_004955432 3830619 3950253 + 102011794 AGCD01030678;AGCD01030679;AGCD01030680;AGCD01030681;AGCD01030682;GBDF01152990;XM_013516072;XM_013516073;XM_013516074;XM_013516075;XM_013516076;XM_013516077 XP_013371526;XP_013371527;XP_013371528;XP_013371529;XP_013371530;XP_013371531 MODEL 9011667 protein-coding Lsm12 LSM12 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955451 17194409 17213547 - 102007965 AGCD01043728;AGCD01043729;GBCE01009781;XM_005394514;XR_262623 XP_005394571 MODEL 8940370 protein-coding Tll2 tolloid like 2 INVOLVED IN negative regulation of skeletal muscle tissue growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955507 2591619 2718161 - 102017483 AGCD01065591;AGCD01065592;GBBH01045943;XM_005407577 XP_005407634 MODEL 8717167 ncrna LOC102007929 uncharacterized LOC102007929 NW_004955435 5612861 5627141 + 102007929 AGCD01032892;AGCD01032893;GBDF01113740;XR_261663 MODEL 9002377 protein-coding Ppp1r8 protein phosphatase 1 regulatory subunit 8 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); protein phosphatase regulator activity (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN cell population proliferation (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955452 7022114 7042770 + 102009908 AGCD01044131;GBBH01186991;XM_005394930;XM_005394931 XP_005394987;XP_005394988 MODEL 9058412 protein-coding Chuk component of inhibitor of nuclear factor kappa B kinase complex ENCODES a protein that exhibits IkappaB kinase activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); cellular response to virus (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; interleukin-1 signaling pathway; ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); bacterial pneumonia (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955507 6066026 6102066 - 102005401 AGCD01065695;AGCD01065696;GBBH01131798;GBCC01033483;XM_005407721 XP_005407778 MODEL 39133354 snorna SNORA66 Small nucleolar RNA SNORA66 9030070 ncrna LOC102018837 uncharacterized LOC102018837 NW_004955421 27841812 27860388 - 102018837 AGCD01022297;GBBH01162065;XR_001233833;XR_001233834 MODEL 8760819 protein-coding Tas1r3 taste 1 receptor member 3 ENCODES a protein that exhibits sweet taste receptor activity (ortholog); taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of sweet taste (ortholog); sensory perception of sweet taste (ortholog); sensory perception of umami taste (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); FOUND IN G protein-coupled receptor dimeric complex (ortholog); plasma membrane (ortholog); sweet taste receptor complex (ortholog) NW_004955486 9469954 9475421 - 102024012 AGCD01059187;GBCQ01086767;XM_005404231;XM_013504184;XM_013504185;XM_013504186;XM_013504188 XP_005404288;XP_013359638;XP_013359639;XP_013359640;XP_013359642 MODEL 8987477 ncrna LOC102006774 uncharacterized LOC102006774 NW_004955482 2917132 2929375 + 102006774 AGCD01057257;GBDF01076956;XR_263823 MODEL 39134400 misc_rna 7SK 7SK RNA 8700901 protein-coding LOC102003877 chromosome unknown open reading frame, human C16orf47 NW_004955484 5772487 5791070 - 102003877 AGCD01058271;XM_005415398 XP_005415455 MODEL 9013929 protein-coding Ptprn2 protein tyrosine phosphatase receptor type N2 INVOLVED IN insulin secretion involved in cellular response to glucose stimulus (ortholog); negative regulation of GTPase activity (ortholog); neurotransmitter secretion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); presynapse (ortholog); secretory granule (ortholog) NW_004955579 366441 862837 - 102006083 AGCD01075546;AGCD01075547;AGCD01075548;AGCD01075549;AGCD01075550;AGCD01075551;AGCD01075552;AGCD01075553;AGCD01075554;AGCD01075555;AGCD01075556;AGCD01075557;GBDF01250942;XM_005414104 XP_005414161 MODEL 9014307 pseudo LOC102012678 60S ribosomal protein L26 pseudogene NW_004955523 522319 523767 - 102012678 AGCD01068463 MODEL 8951152 protein-coding Sap30l SAP30 like ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); non-sequence-specific DNA binding, bending (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN fibrillar center (ortholog); histone deacetylase complex (ortholog); nucleolus (ortholog) NW_004955408 8827744 8832588 + 102030604 AGCD01008226;GBBH01004512;GBDI01012838;XM_005376194 XP_005376251 MODEL 8928379 protein-coding Rasgef1b RasGEF domain family member 1B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955433 5605548 6388880 - 102030339 AGCD01031513;AGCD01031514;AGCD01031515;AGCD01031516;AGCD01031517;AGCD01031518;AGCD01031519;AGCD01031520;AGCD01031521;AGCD01031522;AGCD01031523;AGCD01031524;AGCD01031525;AGCD01031526;AGCD01031527;AGCD01031528;AGCD01031529;AGCD01031530;AGCD01031531;AGCD01031532;AGCD01031533;GBCE01011897;XM_005388230;XM_005388233;XM_005388234;XM_013516120;XM_013516121 XP_005388287;XP_005388290;XP_005388291;XP_013371574;XP_013371575 MODEL 8921813 protein-coding LOC102013091 zinc finger protein 709-like NW_004955420 30017669 30021517 - 102013091 AGCD01021527;AGCD01021528;GBDK01132241;XM_013513351 XP_013368805 MODEL 8806450 protein-coding Tsr3 TSR3 ribosome maturation factor ENCODES a protein that exhibits rRNA small subunit aminocarboxypropyltransferase activity (ortholog); transferase activity (ortholog); INVOLVED IN enzyme-directed rRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog) NW_004955442 15881663 15884222 + 102007944 AGCD01037884;GBBH01118537;XM_005391578 XP_005391635 MODEL 8990641 protein-coding Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 ENCODES a protein that exhibits 2-oxoadipate dehydrogenase activity (ortholog); oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (ortholog); INVOLVED IN amino acid catabolic process (ortholog); generation of precursor metabolites and energy (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH 2-aminoadipic 2-oxoadipic aciduria (ortholog); Abnormal Reflexes (ortholog); brachydactyly (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxoadipate dehydrogenase complex (ortholog) NW_004955462 103501 163472 + 102004909 AGCD01049069;AGCD01049070;AGCD01049071;GBBH01075996;XM_005398075;XM_013521370 XP_005398132;XP_013376824 MODEL 8994863 pseudo LOC102006407 28S ribosomal protein S36, mitochondrial pseudogene NW_004955402 32490863 32492527 - 102006407 AGCD01000824 MODEL 8847074 protein-coding Cplx2 complexin 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); SNARE binding (ortholog); vesicle membrane tethering activity (ortholog); INVOLVED IN positive regulation of synaptic plasticity (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); psychotic disorder (ortholog); schizophrenia (ortholog); FOUND IN calyx of Held (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955408 28308807 28388650 + 102007309 AGCD01008711;GBDF01186507;XM_005376364;XM_005376365 XP_005376421;XP_005376422 MODEL 39133364 snrna U4 U4 spliceosomal RNA 9008329 pseudo LOC102026042 uncharacterized protein C3orf26 homolog NW_004955436 2931930 2958614 - 102026042 AGCD01033615 MODEL 8745076 protein-coding Rab3d RAB3D, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP-dependent protein binding (ortholog); myosin V binding (ortholog); INVOLVED IN bone resorption (ortholog); positive regulation of regulated secretory pathway (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasmic microtubule (ortholog); secretory vesicle (ortholog); zymogen granule (ortholog) NW_004955495 2254336 2259211 - 102018939 AGCD01061759;AGCD01061760;GBBH01063907;XM_005405649;XM_013505109 XP_005405706;XP_013360563 MODEL 8740142 protein-coding Arpc5l actin related protein 2/3 complex subunit 5 like INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN Arp2/3 protein complex (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955419 3360189 3367531 - 102020448 AGCD01019719;GBCB01024721;XM_005382480 XP_005382537 MODEL 8856133 protein-coding Capn12 calpain 12 ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955468 761015 771387 + 102011970 AGCD01051738;AGCD01051739;GBCE01016701;XM_005399839;XM_005399840 XP_005399896;XP_005399897 MODEL 8943797 protein-coding Ccnc cyclin C ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN G0 to G1 transition (ortholog); negative regulation of Notch signaling pathway (ortholog); negative regulation of triglyceride metabolic process (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Burns (ortholog); lymphoma (ortholog); FOUND IN CKM complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); mediator complex (ortholog) NW_004955411 25415023 25447874 - 102024776 AGCD01012156;AGCD01012157;AGCD01012158;GBDK01232929;XM_005377807;XM_005377808;XM_005377809 XP_005377864;XP_005377865;XP_005377866 MODEL 9001346 protein-coding LOC102003548 olfactory receptor 1P1-like NW_004955481 207227 208174 - 102003548 AGCD01056784;XM_005402914 XP_005402971 MODEL 8701061 protein-coding LOC102011427 chromosome unknown open reading frame, human C19orf12 INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Ataxia (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955468 7903438 7914038 + 102011427 AGCD01052015;AGCD01052016;GBCB01022853;XM_005400110 XP_005400167 MODEL 39134401 misc_rna 7SK 7SK RNA 8807547 protein-coding Bdnf brain derived neurotrophic factor ENCODES a protein that exhibits neurotrophin TRKB receptor binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axon target recognition (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ASSOCIATED WITH inner ear disease; acoustic neuroma (ortholog); acute stress disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955476 6773244 6822201 - 102016703 AGCD01055340;AGCD01055341;GBDK01412054;XM_005401751;XM_005401752;XM_005401753;XM_013503014;XM_013503015 XP_005401808;XP_005401809;XP_005401810;XP_013358468;XP_013358469 MODEL 8885251 protein-coding LOC102029966 uncharacterized LOC102029966 NW_004955418 92230 114095 + 102029966 AGCD01018666;AGCD01018667;AGCD01018668;GBDJ01396982;XM_013512889 XP_013368343 MODEL 39133851 misc_rna 7SK 7SK RNA 8836431 pseudo LOC102022169 small ubiquitin-related modifier 2 pseudogene NW_004955460 13632113 13632539 + 102022169 AGCD01048710 MODEL 8975436 protein-coding Polr3k RNA polymerase III subunit K ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); acute myeloid leukemia (ortholog); Disease Progression (ortholog); FOUND IN RNA polymerase III complex (ortholog) NW_004955442 17101585 17106689 + 102010204 AGCD01037937;GBDI01260720;XM_005391684 XP_005391741 MODEL 8707577 protein-coding Ddx18 DEAD-box helicase 18 INVOLVED IN cellular response to estradiol stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955459 11799435 11810973 - 102027723 AGCD01048237;GBCB01076894;XM_005397693 XP_005397750 MODEL 8817798 protein-coding Lsm14a LSM14A mRNA processing body assembly factor ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); mitotic spindle assembly (ortholog); negative regulation of translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytoplasmic stress granule (ortholog) NW_004955468 3799897 3863241 + 102003331 AGCD01051870;AGCD01051871;AGCD01051872;GBDF01154139;XM_005399998;XM_005399999;XM_005400001 XP_005400055;XP_005400056;XP_005400058 MODEL 9020692 protein-coding F3 coagulation factor III, tissue factor ENCODES a protein that exhibits phospholipid binding (ortholog); protease binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); activation of plasma proteins involved in acute inflammatory response (ortholog); blood coagulation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular matrix (ortholog) NW_004955423 254060 264448 + 102008007 AGCD01023411;GBDJ01075489;XM_005384995 XP_005385052 MODEL 8754794 ncrna LOC102005686 uncharacterized LOC102005686 NW_004955465 6940344 6948806 - 102005686 AGCD01050449;GBCB01122620;XR_263246 MODEL 8891627 protein-coding Iqcm IQ motif containing M NW_004955471 4250345 4645729 - 102018715 AGCD01053071;AGCD01053072;AGCD01053073;AGCD01053074;AGCD01053075;AGCD01053076;AGCD01053077;AGCD01053078;AGCD01053079;AGCD01053080;AGCD01053081;AGCD01053082;AGCD01053083;AGCD01053084;GBDF01127836;XM_005400877;XM_005400878;XM_005400879;XM_005400880;XM_013522868;XM_013522869 XP_005400934;XP_005400935;XP_005400936;XP_005400937;XP_013378322;XP_013378323 MODEL 39131609 rrna 5S_rRNA 5S ribosomal RNA 8706589 pseudo LOC102013096 probable E3 ubiquitin-protein ligase HECTD2 NW_004955493 1068126 1073096 + 102013096 AGCD01060877 MODEL 8764680 protein-coding LOC102024218 olfactory receptor 1468-like NW_004955473 3518681 3519637 - 102024218 AGCD01053934;XM_005401293 XP_005401350 MODEL 8974136 protein-coding Slc25a26 solute carrier family 25 member 26 ENCODES a protein that exhibits S-adenosyl-L-methionine transmembrane transporter activity (ortholog); S-adenosyl-L-methionine:S-adenosyl-L-homocysteine antiporter activity (ortholog); INVOLVED IN mitochondrial S-adenosyl-L-methionine transmembrane transport (ortholog); S-adenosyl-L-methionine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); body dysmorphic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955421 21220071 21334330 - 102016605 AGCD01022106;AGCD01022107;GBCQ01094953;XM_013513718;XM_013513719;XM_013513720;XM_013513721;XM_013513722;XM_013513723 XP_013369172;XP_013369173;XP_013369174;XP_013369175;XP_013369176;XP_013369177 MODEL 10375512 protein-coding LOC106148603 collagen alpha-1(I) chain-like NW_004955403 1654901 1663162 - 106148603 AGCD01001723;AGCD01001724;GBDF01103659;XM_013514711 XP_013370165 MODEL 8952810 protein-coding Ppp1r9a protein phosphatase 1 regulatory subunit 9A ENCODES a protein that exhibits actin filament binding (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); calcium-mediated signaling (ortholog); cellular response to toxic substance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); cytoskeleton (ortholog) NW_004955432 11607269 11891568 + 102015138 AGCD01030954;AGCD01030955;AGCD01030956;AGCD01030957;GBCQ01126778;XM_005388052;XM_005388053;XM_005388054;XM_005388055;XM_005388056;XM_005388057;XM_005388058;XM_005388059;XM_013516008;XM_013516009 XP_005388109;XP_005388110;XP_005388111;XP_005388112;XP_005388113;XP_005388114;XP_005388115;XP_005388116;XP_013371462;XP_013371463 MODEL 39132715 snorna SNORD83 Small nucleolar RNA SNORD83 8766313 ncrna LOC102010640 uncharacterized LOC102010640 NW_004955556 1708260 1721389 - 102010640 AGCD01073200;GBBH01223895;XR_264978 MODEL 39132947 misc_rna Y_RNA Y RNA 8746347 protein-coding Emsy EMSY transcriptional repressor, BRCA2 interacting ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); asthma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 15395851 15482490 - 102015398 AGCD01015184;AGCD01015185;AGCD01015186;GBDK01013488;XM_005379854;XM_005379859;XM_005379860;XM_005379861;XM_005379865;XM_013511858;XM_013511859;XM_013511860;XM_013511861;XM_013511862;XM_013511863;XM_013511864;XM_013511865;XM_013511866;XM_013511867;XM_013511868;XM_013511869;XM_013511870;XM_013511871;XR_001233129;XR_001233130 XP_005379911;XP_005379916;XP_005379917;XP_005379918;XP_005379922;XP_013367312;XP_013367313;XP_013367314;XP_013367315;XP_013367316;XP_013367317;XP_013367318;XP_013367319;XP_013367320;XP_013367321;XP_013367322;XP_013367323;XP_013367324;XP_013367325 MODEL 8824120 ncrna LOC102012680 uncharacterized LOC102012680 NW_004955435 7947806 7951442 - 102012680 AGCD01032982;GBDF01049854;XR_001234875;XR_001234876;XR_001234877 MODEL 8781071 protein-coding CUNH15orf61 chromosome unknown C15orf61 homolog ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955450 8473239 8480571 - 102024744 AGCD01042566;GBBH01006691;XM_005393689 XP_005393746 MODEL 39132165 rrna 5S_rRNA 5S ribosomal RNA 8952536 pseudo LOC102025343 40S ribosomal protein S7 pseudogene NW_004955469 6328707 6329270 + 102025343 AGCD01052380 MODEL 8743271 protein-coding Frmd4a FERM domain containing 4A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); negative regulation of protein secretion (ortholog); positive regulation of protein secretion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); CORPUS CALLOSUM, AGENESIS OF, WITH FACIAL ANOMALIES AND CEREBELLAR ATAXIA (ortholog); esophageal cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955429 19981599 20552700 + 102025935 AGCD01028975;AGCD01028976;AGCD01028977;AGCD01028978;AGCD01028979;AGCD01028980;AGCD01028981;AGCD01028982;AGCD01028983;AGCD01028984;GBBH01029225;GBBH01107217;XM_013515429 XP_013370883 MODEL 8996982 protein-coding Ehmt2 euchromatic histone lysine methyltransferase 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); H1-4K26 methyltransferase activity (ortholog); histone H3K27 methyltransferase activity (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to cocaine (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alopecia areata (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nuclear speck (ortholog) NW_004955437 396736 411144 - 102003800 AGCD01034129;GBCE01187461;GBCQ01066738;XM_005389393;XM_005389394;XM_013516776;XM_013516777 XP_005389450;XP_005389451;XP_013372230;XP_013372231 MODEL 9008281 protein-coding Ccnd1 cyclin D1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell population proliferation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN E-cadherin signaling pathway; G1/S transition pathway; Notch signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cyclin D1-CDK4 complex (ortholog); cyclin D1-CDK6 complex (ortholog) NW_004955422 16449921 16462676 - 102024919 AGCD01022898;GBBH01033468;XM_005384251 XP_005384308 MODEL 8825508 protein-coding Tln1 talin 1 ENCODES a protein that exhibits integrin binding (ortholog); LIM domain binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN cell-substrate junction assembly (ortholog); cortical actin cytoskeleton organization (ortholog); cortical microtubule organization (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN adherens junction (ortholog); centriolar satellite (ortholog); cytosol (ortholog) NW_004955472 568939 603676 + 102007109 AGCD01053341;GBCB01022575;XM_005401002;XM_005401004;XM_013522935 XP_005401059;XP_005401061;XP_013378389 MODEL 8759743 pseudo LOC102009446 heat shock cognate 71 kDa protein pseudogene NW_004955402 47210640 47213865 + 102009446 AGCD01001177;XR_259129 MODEL 8919178 pseudo LOC102022171 galactoside 2-alpha-L-fucosyltransferase 1-like NW_004955460 11131749 11133358 - 102022171 AGCD01048629 MODEL 8861374 pseudo LOC102006775 tRNA methyltransferase 10 homolog A pseudogene NW_004955418 23030539 23031447 + 102006775 AGCD01019297 MODEL 10311497 protein-coding LOC106147514 mucin-12-like NW_004955573 15843 45121 - 106147514 AGCD01074957;AGCD01074958;GBDJ01421515;XM_013509446;XM_013509447 XP_013364900;XP_013364901 MODEL 8745190 ncrna LOC102026043 uncharacterized LOC102026043 NW_004955540 2042878 2048223 - 102026043 AGCD01071309;GBDK01150011;XR_264823 MODEL 8844642 pseudo LOC102003880 transcription initiation factor TFIID subunit 7-like pseudogene NW_004955488 7941790 7996454 + 102003880 AGCD01059698;XM_005404481 MODEL 8936844 ncrna LOC102005337 uncharacterized LOC102005337 NW_004955406 13632067 13716155 - 102005337 AGCD01005948;AGCD01005949;GBDF01163324;XR_001236425;XR_001236426;XR_001236427 MODEL 8954288 protein-coding Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); establishment of protein localization to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH amenorrhea (ortholog); cataract (ortholog); cervical cancer (ortholog); FOUND IN cis-Golgi network (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955440 2551015 2645938 + 102007155 AGCD01036210;AGCD01036211;AGCD01036212;AGCD01036213;AGCD01036214;AGCD01036215;AGCD01036216;GBDI01170428;XM_005390760 XP_005390817 MODEL 8715298 protein-coding Ptpro protein tyrosine phosphatase receptor type O ENCODES a protein that exhibits cadherin binding (ortholog); protein homodimerization activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN axon guidance (ortholog); cell morphogenesis (ortholog); glomerulus development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); dendritic spine (ortholog); GABA-ergic synapse (ortholog) NW_004955413 12019026 12248026 + 102005022 AGCD01013977;AGCD01013978;AGCD01013979;AGCD01013980;AGCD01013981;AGCD01013982;AGCD01013983;AGCD01013984;AGCD01013985;GBDJ01377144;XM_005379017;XM_013511680;XM_013511681 XP_005379074;XP_013367134;XP_013367135 MODEL 8969128 protein-coding Sapcd1 suppressor APC domain containing 1 NW_004955437 297605 299242 + 102027898 AGCD01034117;GBDI01139374;XM_005389384;XM_013516811;XM_013516812 XP_005389441;XP_013372265;XP_013372266 MODEL 39134402 misc_rna 7SK 7SK RNA 8833652 protein-coding LOC102007940 NKG2D ligand 1-like NW_004955439 11374237 11379696 + 102007940 AGCD01035901;AGCD01035902;AGCD01035903;GBCE01111523;GBDK01115668;XM_013517300 XP_013372754 MODEL 9010710 protein-coding Churc1 churchill domain containing 1 NW_004955466 4991571 5013568 - 102026091 AGCD01050864;AGCD01050865;GBCQ01011763;XM_005399116 XP_005399173 MODEL 8732617 pseudo LOC102025344 osteoclast-stimulating factor 1 pseudogene NW_004955414 9310670 9311289 - 102025344 AGCD01015017 MODEL 8987814 protein-coding Tas2r16 taste 2 receptor member 16 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955479 4591015 4591920 - 102021343 AGCD01056326;XM_005402452 XP_005402509 MODEL 8887566 protein-coding Dhx15 DEAH-box helicase 15 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); defense response to bacterium (ortholog); defense response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); post-mRNA release spliceosomal complex (ortholog) NW_004955480 451126 502226 + 102026110 AGCD01056582;GBCQ01039272;XM_005402461 XP_005402518 MODEL 8991493 protein-coding Cplx3 complexin 3 ENCODES a protein that exhibits neurotransmitter transmembrane transporter activity (ortholog); SNARE binding (ortholog); INVOLVED IN insulin secretion (ortholog); regulation of neurotransmitter secretion (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nucleus (ortholog) NW_004955450 3105364 3110246 - 102009130 AGCD01042422;XM_005393540 XP_005393597 MODEL 39133370 snrna U4 U4 spliceosomal RNA 39131610 rrna 5S_rRNA 5S ribosomal RNA 8861761 protein-coding Iqcn IQ motif containing N INVOLVED IN single fertilization (ortholog); sperm flagellum assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955524 3181133 3195111 + 102020602 AGCD01068864;AGCD01068865;AGCD01068866;AGCD01068867;GBDF01002962;XM_013507314;XM_013507315;XM_013507316;XM_013507317;XM_013507318 XP_013362768;XP_013362769;XP_013362770;XP_013362771;XP_013362772 MODEL 8725473 protein-coding F5 coagulation factor V INVOLVED IN blood circulation (ortholog); blood coagulation (ortholog); proteolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); blood coagulation disease (ortholog); brain ischemia (ortholog); FOUND IN extracellular region (ortholog); platelet alpha granule (ortholog) NW_004955462 7695004 7757832 + 102012615 AGCD01049309;GBBH01073086;XM_005398188 XP_005398245 MODEL 8959217 protein-coding Dynlt4 dynein light chain Tctex-type 4 ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955464 13417735 13419646 + 102007316 AGCD01050275;GBDI01118775;XM_005398725;XM_005398726;XM_005398727 XP_005398782;XP_005398783;XP_005398784 MODEL 730469113 misc_rna Six3os1_2 Six3os1 conserved region 2 8943699 protein-coding Rhoq ras homolog family member Q ENCODES a protein that exhibits GBD domain binding (ortholog); GTPase activity (ortholog); profilin binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin filament (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955441 13457757 13495221 + 102013343 AGCD01037151;GBBH01164132;GBDK01318868;XM_005390979;XM_013517588 XP_005391036;XP_013373042 MODEL 39132948 misc_rna Y_RNA Y RNA 8967454 ncrna LOC102011431 uncharacterized LOC102011431 NW_004955414 6656760 6678985 + 102011431 AGCD01014926;GBBH01097014;XR_001233094;XR_001233095;XR_001233097;XR_260157 MODEL 8890650 protein-coding Ppp1r9b protein phosphatase 1 regulatory subunit 9B ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); D2 dopamine receptor binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); calcium-mediated signaling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Cognitive Dysfunction (ortholog); Colorectal Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955451 11516548 11530263 + 102015685 AGCD01043357;GBDF01098962;XM_005394179 XP_005394236 MODEL 39131611 rrna 5S_rRNA 5S ribosomal RNA 8941266 protein-coding Bdp1 BDP1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); autosomal recessive nonsyndromic deafness 112 (ortholog); FOUND IN nucleoplasm (ortholog); transcription factor TFIIIB complex (ortholog) NW_004955575 330683 430269 + 102027917 AGCD01075218;AGCD01075219;AGCD01075220;AGCD01075221;GBDF01178164;XM_005413925;XM_005413926;XM_005413927;XM_005413928;XM_005413930 XP_005413982;XP_005413983;XP_005413984;XP_005413985;XP_005413987 MODEL 8843694 pseudo LOC102006412 uncharacterized LOC102006412 NW_004955450 9656148 9662906 + 102006412 AGCD01042594 MODEL 8872556 protein-coding CUNH15orf62 chromosome unknown C15orf62 homolog ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955416 7621794 7624837 + 102027846 AGCD01016995;GBDK01321324;XM_005381264 XP_005381321 MODEL 9053040 protein-coding LOC102018844 neutrophil elastase ENCODES a protein that exhibits cytokine binding (ortholog); endopeptidase activity (ortholog); heparin binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); defense response to bacterium (ortholog); defense response to fungus (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); anthrax disease (ortholog); FOUND IN azurophil granule (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955495 6964577 6967208 - 102018844 AGCD01062105;GBDF01239090;XM_005406018 XP_005406075 MODEL 8837074 protein-coding Ei24 EI24 autophagy associated transmembrane protein ENCODES a protein that exhibits importin-alpha family protein binding (ortholog); INVOLVED IN autophagy (ortholog); cellular response to UV-C (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955412 26574814 26586154 + 102021428 AGCD01013199;AGCD01013200;GBCQ01039359;XM_005378462 XP_005378519 MODEL 150537121 snorna SNORD86 Small nucleolar RNA SNORD86 8872071 ncrna LOC102005689 uncharacterized LOC102005689 NW_004955467 6901040 6907444 - 102005689 AGCD01051425;GBDF01303832;XR_263347 MODEL 9011541 protein-coding Ddx19b DEAD-box helicase 19B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955484 3120480 3137917 + 102029296 AGCD01058155;AGCD01058156;GBDJ01191119;XM_005403472 XP_005403529 MODEL 8962937 ncrna LOC102024219 uncharacterized LOC102024219 NW_004955415 11233747 11246572 - 102024219 AGCD01016154;GBDK01311887;XR_001233240 MODEL 153211028 protein-coding ARPIN actin related protein 2/3 complex inhibitor 8979274 protein-coding LOC102013097 zinc finger protein 782 NW_004955422 23787215 23873788 - 102013097 AGCD01023206;AGCD01023207;AGCD01023208;AGCD01023209;AGCD01023210;GBBH01218955;XM_005384706;XM_013513992;XM_013513993;XM_013513994;XM_013513995;XM_013513996;XM_013513997;XM_013513998;XM_013513999;XM_013514000;XM_013514001;XM_013514002 XP_005384763;XP_013369446;XP_013369447;XP_013369448;XP_013369449;XP_013369450;XP_013369451;XP_013369452;XP_013369453;XP_013369454;XP_013369455;XP_013369456 MODEL 9000005 pseudo LOC102003550 lysine--tRNA ligase-like NW_004955418 23372260 23375258 + 102003550 AGCD01019301 MODEL 8712673 protein-coding LOC102010643 leukocyte immunoglobulin-like receptor subfamily A member 3 NW_004955567 1316802 1426452 - 102010643 AGCD01074467;AGCD01074468;AGCD01074469;AGCD01074470;AGCD01074471;AGCD01074472;AGCD01074473;AGCD01074474;AGCD01074475;AGCD01074476;XM_013509260 XP_013364714 MODEL 39133371 snrna U4 U4 spliceosomal RNA 8870437 pseudo LOC102012683 cyclin-dependent kinase 1-like NW_004955530 1703354 1747813 + 102012683 AGCD01069897;AGCD01069898;AGCD01069899 MODEL 8867141 protein-coding Rasgef1c RasGEF domain family member 1C ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian cancer (ortholog) NW_004955408 482107 515132 + 102008190 AGCD01007922;AGCD01007923;GBBH01010353;XM_013507276 XP_013362730 MODEL 39133357 snorna SNORA66 Small nucleolar RNA SNORA66 8878480 ncrna LOC102005341 uncharacterized LOC102005341 NW_004955408 8988844 8997598 - 102005341 AGCD01008230;GBDF01277633;XR_259674 MODEL 8929077 protein-coding Sapcd2 suppressor APC domain containing 2 INVOLVED IN establishment of mitotic spindle orientation (ortholog); negative regulation of protein localization to cell cortex (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); developmental and epileptic encephalopathy 14 (ortholog); FOUND IN apical cortex (ortholog); apical junction complex (ortholog); apical plasma membrane (ortholog) NW_004955513 5086379 5090876 - 102030109 AGCD01066954;GBDF01156921;XM_013506719 XP_013362173 MODEL 39134403 misc_rna 7SK 7SK RNA 8774746 protein-coding Polrmt RNA polymerase mitochondrial ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); DNA-directed RNA polymerase activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN mitochondrial transcription (ortholog); transcription initiation at mitochondrial promoter (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alpers-Huttenlocher syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955495 7111271 7124005 + 102022939 AGCD01062119;GBDJ01389358;XM_005406033 XP_005406090 MODEL 8820626 protein-coding Ptprq protein tyrosine phosphatase receptor type Q INVOLVED IN detection of mechanical stimulus involved in sensory perception of sound (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 73 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 84A (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); stereocilium base (ortholog) NW_004955405 19123905 19318619 + 102021834 AGCD01005031;AGCD01005032;AGCD01005033;AGCD01005034;AGCD01005035;GBCE01116834;XM_005374365;XM_013517925 XP_005374422;XP_013373379 MODEL 8921196 protein-coding Ccnd2 cyclin D2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); astigmatism (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cyclin D2-CDK4 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955413 2083351 2108450 + 102028624 AGCD01013539;GBDK01142160;XM_005378726 XP_005378783 MODEL 8854610 protein-coding Bean1 brain expressed associated with NEDD4 1 ASSOCIATED WITH esophageal cancer (ortholog); lymphoma (ortholog); spinocerebellar ataxia 31 (ortholog) NW_004955433 23017335 23059054 + 102015559 AGCD01031952;GBCE01163374;XM_005388509 XP_005388566 MODEL 39134404 misc_rna 7SK 7SK RNA 8745813 protein-coding LOC102025345 uncharacterized LOC102025345 NW_004955470 4335967 4370486 + 102025345 AGCD01052729;AGCD01052730;GBCB01120642;XM_005400690;XM_005400691;XM_005400692;XM_005400693 XP_005400747;XP_005400748;XP_005400749;XP_005400750 MODEL 8748158 protein-coding Slc25a27 solute carrier family 25 member 27 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN inner ear development (ortholog); intracellular triglyceride homeostasis (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN apical part of cell (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955437 11497308 11514208 + 102007055 AGCD01034574;GBDF01042740;XM_005389860;XM_005389862 XP_005389917;XP_005389919 MODEL 8868191 ncrna LOC102022173 uncharacterized LOC102022173 NW_004955462 9257426 9259568 - 102022173 AGCD01049335;GBDK01198807;XR_001236611 MODEL 8823160 protein-coding Dhx16 DEAH-box helicase 16 ENCODES a protein that exhibits molecular adaptor activity (ortholog); pattern recognition receptor activity (ortholog); ubiquitin binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955583 657425 668390 - 102004765 AGCD01075846;AGCD01075847;GBBH01061492;GBCB01038131;XM_013509799 XP_013365253 MODEL 10185757 pseudo LOC106147515 insulin receptor substrate 1-like NW_004955573 331063 332779 - 106147515 AGCD01074975 MODEL 8900987 protein-coding Emx1 empty spiracles homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); brain morphogenesis (ortholog); cerebral cortex development (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955424 12666280 12683023 - 102021025 AGCD01024617;GBCQ01035827;XM_005385579 XP_005385636 MODEL 8896874 protein-coding LOC102029967 putative olfactory receptor 3A4 NW_004955481 107749 108711 - 102029967 AGCD01056781;XM_005402911 XP_005402968 MODEL 39132167 rrna 5S_rRNA 5S ribosomal RNA 8722577 protein-coding Iqgap1 IQ motif containing GTPase activating protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); MAP kinase scaffold activity (ortholog); INVOLVED IN caveola assembly (ortholog); cell migration (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955416 14558628 14652031 + 102014354 AGCD01017276;AGCD01017277;AGCD01017278;AGCD01017279;GBDF01087718;XM_005381503 XP_005381560 MODEL 39133852 misc_rna 7SK 7SK RNA 8814118 pseudo LOC102003551 CD63 antigen pseudogene NW_004955484 4514735 4515444 - 102003551 AGCD01058216 MODEL 8932664 protein-coding Lsm14b LSM family member 14B ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN maternal mRNA clearance (ortholog); meiotic cell cycle process involved in oocyte maturation (ortholog); membraneless organelle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog) NW_004955528 1889016 1901051 - 102005964 AGCD01069575;AGCD01069576;GBBH01063613;GBCQ01093370;XM_013507506 XP_013362960 MODEL 9034137 protein-coding Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 ENCODES a protein that exhibits enzyme regulator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN establishment of protein localization to endoplasmic reticulum membrane (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of endoplasmic reticulum tubular network organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GTPase complex (ortholog) NW_004955520 3411504 3483703 + 102022531 AGCD01068102;AGCD01068103;GBDK01092646;XM_005409267;XM_005409268;XM_005409269 XP_005409324;XP_005409325;XP_005409326 MODEL 9062605 protein-coding Rhot1 ras homolog family member T1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); calcium ion binding (ortholog); GDP binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); establishment of mitochondrion localization by microtubule attachment (ortholog); mitochondrial outer membrane permeabilization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955481 7149836 7199296 + 102023596 AGCD01057056;AGCD01057057;GBCE01134334;XM_005402812;XM_005402814;XM_013503493;XM_013503494;XM_013503495 XP_005402869;XP_005402871;XP_013358947;XP_013358948;XP_013358949 MODEL 8807388 protein-coding LOC102009447 vomeronasal type-1 receptor 4-like NW_004955603 356667 357605 - 102009447 AGCD01076839;XM_005414843 XP_005414900 MODEL 10381390 ncrna LOC106148604 uncharacterized LOC106148604 NW_004955424 19232078 19235193 - 106148604 AGCD01024810;GBDK01177030;XR_001234224;XR_001234225 MODEL 8905494 protein-coding Tln2 talin 2 INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fascia adherens (ortholog) NW_004955450 12391049 12740232 - 102004540 AGCD01042701;AGCD01042702;AGCD01042703;AGCD01042704;AGCD01042705;AGCD01042706;AGCD01042707;AGCD01042708;GBCQ01035607;GBDJ01088994;XM_005393813 XP_005393870 MODEL 8827863 protein-coding LOC102003881 olfactory receptor-like protein OLF3 NW_004955491 257421 258371 + 102003881 AGCD01060325;XM_005404721 XP_005404778 MODEL 9006970 protein-coding Capn13 calpain 13 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955469 12497890 12569453 - 102005361 AGCD01052582;AGCD01052583;GBDI01317938;XM_013522570 XP_013378024 MODEL 8943306 protein-coding Ciao1 cytosolic iron-sulfur assembly component 1 INVOLVED IN iron-sulfur cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog); MMXD complex (ortholog) NW_004955470 3822606 3828563 + 102015831 AGCD01052712;GBDF01248841;XM_005400655 XP_005400712 MODEL 39132887 snorna SNORD87 Small nucleolar RNA SNORD87 8956473 ncrna LOC102005690 uncharacterized LOC102005690 NW_004955413 2434741 2435420 - 102005690 AGCD01013546;GBDF01017398;XR_260051 MODEL 9005632 protein-coding Cplx4 complexin 4 ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN regulation of neurotransmitter secretion (ortholog); FOUND IN plasma membrane (ortholog); synapse (ortholog) NW_004955402 43435939 43455704 - 102014513 AGCD01001073;XM_005373002 XP_005373059 MODEL 8782177 protein-coding Ppp2ca protein phosphatase 2 catalytic subunit alpha ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); enzyme binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac ventricle development (ortholog); cellular response to calcium ion (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, centromeric region (ortholog) NW_004955408 5435117 5460361 - 102012929 AGCD01008137;AGCD01008138;GBCQ01004946;XM_005376137 XP_005376194 MODEL 730469391 misc_rna Six3os1_3 Six3os1 conserved region 3 8943252 protein-coding Tssc4 tumor suppressing subtransferable candidate 4 ENCODES a protein that exhibits molecular sequestering activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN spliceosomal snRNP assembly (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); U5 snRNP (ortholog) NW_004955422 14175271 14178991 + 102014579 AGCD01022855;GBDF01024714;XM_013514301;XM_013514302 XP_013369755;XP_013369756 MODEL 8862298 protein-coding F7 coagulation factor VII ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); blood coagulation (ortholog); circadian rhythm (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acquired angioedema (ortholog); Acute Liver Failure (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955404 685170 692797 - 102010860 AGCD01003207;GBCQ01072735;XM_005373970 XP_005374027 MODEL 39132949 misc_rna Y_RNA Y RNA 39131612 rrna 5S_rRNA 5S ribosomal RNA 8860695 pseudo LOC102007941 coiled-coil domain-containing protein 152-like NW_004955440 2711927 2712937 + 102007941 AGCD01036218 MODEL 39133372 snrna U4 U4 spliceosomal RNA 10110819 ncrna LOC106147516 uncharacterized LOC106147516 NW_004955573 64079 65677 - 106147516 AGCD01074959;GBBH01045635;XR_001232440 MODEL 730468975 snorna SNORA67 Small nucleolar RNA SNORA67 8893516 pseudo LOC102005342 COP9 signalosome complex subunit 8 pseudogene NW_004955457 11873480 11874149 - 102005342 AGCD01046991 MODEL 8705732 protein-coding Tas2r3 taste 2 receptor member 3 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) NW_004955494 1799438 1800388 - 102006678 AGCD01061424;XM_005405533 XP_005405590 MODEL 8872874 protein-coding LOC102012689 keratin, type II cytoskeletal 73 NW_004955547 3011391 3021597 - 102012689 AGCD01072303;GBCB01047840;XM_005411952;XM_005411953 XP_005412009;XP_005412010 MODEL 8941061 protein-coding CUNH16orf74 chromosome unknown C16orf74 homolog INVOLVED IN adaptive thermogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955541 824381 843420 - 102019432 AGCD01071361;GBCE01181560;GBDJ01336195;XM_005410980 XP_005411037 MODEL 8936915 protein-coding Pom121l12 POM121 transmembrane nucleoporin like 12 NW_004955465 8249402 8251149 + 102007750 AGCD01050471;GBDF01221912;XM_005398875 XP_005398932 MODEL 8993621 ncrna LOC102018845 uncharacterized LOC102018845 NW_004955499 7438345 7462684 - 102018845 AGCD01063587;GBCE01090104;XR_001231453;XR_264222 MODEL 8952069 protein-coding LOC102006413 60S ribosomal protein L31-like NW_004955403 19401656 19402305 + 102006413 AGCD01002125;XM_005373402 XP_005373459 MODEL 8750732 protein-coding Becn1 beclin 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); autophagosome assembly (ortholog); autophagosome maturation (ortholog); PARTICIPATES IN autophagy pathway; inositol metabolic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute necrotizing pancreatitis (ortholog); alcohol-associated liver disease (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog) NW_004955451 16616595 16625731 - 102024414 AGCD01043696;GBCQ01005143;XM_005394481;XM_013519257 XP_005394538;XP_013374711 MODEL 39134405 misc_rna 7SK 7SK RNA 8798603 pseudo LOC102013101 MICOS complex subunit MIC27 pseudogene NW_004955424 28108796 28113637 - 102013101 AGCD01025147 MODEL 8914386 pseudo LOC102022177 serpin B9-like NW_004955465 10417040 10426823 + 102022177 AGCD01050509;AGCD01050510 MODEL 8962153 protein-coding Arpp19 cAMP regulated phosphoprotein 19 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); protein phosphatase 2A binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); mitotic cell cycle (ortholog); positive regulation of gluconeogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); synapse (ortholog) NW_004955409 2354988 2369846 + 102019248 AGCD01009197;GBDF01002871;XM_005376632 XP_005376689 MODEL 8939475 pseudo LOC102011433 zinc finger protein 35-like NW_004955414 19831492 19837666 - 102011433 AGCD01015339 MODEL 8952141 ncrna LOC102010644 uncharacterized LOC102010644 NW_004955445 12260606 12264915 + 102010644 AGCD01039746;GBDF01008996;XR_001235639 MODEL 8887992 protein-coding Frmd4b FERM domain containing 4B INVOLVED IN establishment of epithelial cell polarity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955421 18423238 18669514 + 102010270 AGCD01022044;AGCD01022045;AGCD01022046;AGCD01022047;AGCD01022048;AGCD01022049;AGCD01022050;AGCD01022051;AGCD01022052;GBDF01049647;XM_005383801;XM_005383803;XM_005383804;XM_005383805 XP_005383858;XP_005383860;XP_005383861;XP_005383862 MODEL 9043964 protein-coding Dhx29 DExH-box helicase 29 ENCODES a protein that exhibits ribonucleoside triphosphate phosphatase activity (ortholog); ribosomal small subunit binding (ortholog); translation activator activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); ribosome assembly (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); Cardiac Arrhythmias (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytosolic small ribosomal subunit (ortholog); eukaryotic 43S preinitiation complex (ortholog) NW_004955446 12362324 12412814 + 102017176 AGCD01040230;GBDF01189845;XM_005392696;XM_005392697 XP_005392753;XP_005392754 MODEL 8943551 protein-coding LOC102003553 somatomedin-B and thrombospondin type-1 domain-containing protein-like NW_004955420 12198618 12206853 + 102003553 AGCD01020857;GBDF01251527;XM_005383099 XP_005383156 MODEL 39131456 protein-coding RASGEF1C RasGEF domain family member 1C 8911233 protein-coding Cpm carboxypeptidase M PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH autistic disorder (ortholog); endometriosis (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955458 15296783 15360753 - 102008920 AGCD01047882;AGCD01047883;AGCD01047884;GBDJ01010130;XM_005397485;XM_013520938 XP_005397542;XP_013376392 MODEL 8720264 protein-coding LOC102026044 A-kinase anchor protein 17A-like NW_004955439 8813335 8830470 - 102026044 AGCD01035813;GBDF01082647;XM_005390568;XM_013517409 XP_005390625;XP_013372863 MODEL 8703582 protein-coding LOC102006777 olfactory receptor 2G6 NW_004955418 29618805 29621581 - 102006777 AGCD01019475;XM_005382357 XP_005382414 MODEL 8791834 protein-coding Eid1 EP300 interacting inhibitor of differentiation 1 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Mesothelioma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 5066042 5067747 - 102010555 AGCD01009307;GBBH01031729;XM_005376696 XP_005376753 MODEL 8857094 protein-coding Ccnd3 cyclin D3 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); hyaluronan biosynthetic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); cervix carcinoma (ortholog); FOUND IN cyclin D3-CDK4 complex (ortholog); cyclin D3-CDK6 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955437 8266523 8273855 - 102019529 AGCD01034483;GBDF01126906;GBDI01000235;XM_013516782;XM_013516783 XP_013372236;XP_013372237 MODEL 10186608 protein-coding LOC106148605 translation initiation factor IF-2-like NW_004955403 3212450 3213998 + 106148605 AGCD01001757;GBCE01151582;XM_013514717 XP_013370171 MODEL 9037897 pseudo LOC102024225 zinc finger protein 181-like NW_004955478 7295033 7296935 + 102024225 AGCD01055956 MODEL 8907252 protein-coding Dynlt5 dynein light chain Tctex-type family member 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955423 24125928 24148629 - 102019407 AGCD01024031;GBDF01135150;XM_005385289 XP_005385346 MODEL 8982640 protein-coding Tlnrd1 talin rod domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN stress fiber (ortholog) NW_004955416 11739879 11742381 + 102021877 AGCD01017190;AGCD01017191;GBBH01207356;GBDK01234268;XM_005381439 XP_005381496 MODEL 8710866 protein-coding Ddx20 DEAD-box helicase 20 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955435 15209640 15219698 + 102028792 AGCD01033264;GBDF01003762;XM_005388953 XP_005389010 MODEL 8895963 protein-coding Capn14 calpain 14 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955469 12899174 12929408 - 102023251 AGCD01052588;AGCD01052589;GBDK01133219;XM_013522553;XM_013522554;XM_013522555;XM_013522556 XP_013378007;XP_013378008;XP_013378009;XP_013378010 MODEL 8942557 protein-coding Slc25a28 solute carrier family 25 member 28 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955507 5520915 5530615 - 102005067 AGCD01065678;GBDJ01079892;GBDK01080161;XM_013506230 XP_013361684 MODEL 8742025 protein-coding LOC102005691 NKG2-D type II integral membrane protein ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); negative regulation of natural killer cell chemotaxis (ortholog); negative regulation of natural killer cell mediated cytotoxicity directed against tumor cell target (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955413 7489158 7503014 + 102005691 AGCD01013822;GBDK01000444;XM_013511691;XM_013511692;XR_260066 XP_013367145;XP_013367146 MODEL 39132168 rrna 5S_rRNA 5S ribosomal RNA 8917431 ncrna LOC102011434 uncharacterized LOC102011434 NW_004955470 12696997 12745344 + 102011434 AGCD01052936;AGCD01052937;GBCE01144649;XR_001237028;XR_001237029;XR_263507 MODEL 39133373 snrna U4 U4 spliceosomal RNA 8918371 protein-coding Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ENCODES a protein that exhibits actin binding (ortholog); cyclin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); cardiac muscle hypertrophy (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH allergic disease (ortholog); allergic rhinitis (ortholog); amblyopia (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955407 36456628 36588940 + 102015174 AGCD01007769;AGCD01007770;AGCD01007771;GBDF01046753;GBDK01234122;XM_005375747;XM_005375749;XM_005375750;XM_005375751;XM_013504724 XP_005375804;XP_005375806;XP_005375807;XP_005375808;XP_013360178 MODEL 8752745 protein-coding Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); Lsm2-8 complex (ortholog) NW_004955437 321367 325556 - 102029115 AGCD01034119;GBDF01050366;XM_005389388 XP_005389445 MODEL 39133853 misc_rna 7SK 7SK RNA 8855280 protein-coding LOC102007943 keratin, type II cuticular Hb3 NW_004955547 2671303 2677998 - 102007943 AGCD01072294;GBDK01416954;XM_005411938 XP_005411995 MODEL 626189171 snorna SNORA67 Small nucleolar RNA SNORA67 8731340 protein-coding LOC102003886 olfactory receptor 4X1-like NW_004955422 269162 270091 - 102003886 AGCD01022401;XM_005384932 XP_005384989 MODEL 8751759 pseudo LOC102012691 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955551 615007 616795 + 102012691 AGCD01072666 MODEL 8820426 protein-coding CUNH16orf78 chromosome unknown C16orf78 homolog ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955433 7603234 7620319 + 102012466 AGCD01031574;GBDF01082318;XM_005388257 XP_005388314 MODEL 8895042 protein-coding LOC102025347 calcitonin FOUND IN neuronal cell body NW_004955414 30038416 30041811 - 102025347 AGCD01015726;GBDI01013654;XM_005380336;XM_005380337 XP_005380393;XP_005380394 MODEL 9026989 protein-coding Ciao2a cytosolic iron-sulfur assembly component 2A INVOLVED IN iron-sulfur cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH colorectal cancer (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955450 11306099 11327688 + 102019655 AGCD01042653;AGCD01042654;AGCD01042655;GBDF01132346;XM_005393761;XM_005393762;XM_005393763 XP_005393818;XP_005393819;XP_005393820 MODEL 8930203 protein-coding Begain brain enriched guanylate kinase associated INVOLVED IN evoked excitatory postsynaptic potential (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955438 21572080 21580311 - 102018650 AGCD01035547;GBDF01209194;XM_013517281 XP_013372735 MODEL 39134406 misc_rna 7SK 7SK RNA 8733057 protein-coding Tssk2 testis specific serine kinase 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN spermatid development (ortholog); FOUND IN acrosomal vesicle (ortholog); centriole (ortholog); cytoplasm (ortholog) NW_004955442 18846491 18847485 - 102012906 AGCD01038022;GBDF01236314;XM_005415367 XP_005415424 MODEL 730469381 misc_rna Six3os1_4 Six3os1 conserved region 4 8897222 pseudo LOC102013103 nuclear receptor-binding factor 2 pseudogene NW_004955425 22838039 22839048 + 102013103 AGCD01025835 MODEL 8775032 protein-coding Rab3il1 RAB3A interacting protein like 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog) NW_004955511 5797528 5810692 + 102006805 AGCD01066585;AGCD01066586;GBDF01005308;XM_005408129;XM_005408130;XM_013506427;XM_013506428;XM_013506429 XP_005408186;XP_005408187;XP_013361881;XP_013361882;XP_013361883 MODEL 8890675 protein-coding Sar1a secretion associated Ras related GTPase 1A ENCODES a protein that exhibits amino acid sensor activity (ortholog); G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to leucine starvation (ortholog); COPII vesicle coat assembly (ortholog); COPII-coated vesicle cargo loading (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN COPII vesicle coat (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955437 21075632 21093608 + 102015889 AGCD01034896;GBDF01048679;XM_005390065;XM_005390066;XM_005390067 XP_005390122;XP_005390123;XP_005390124 MODEL 8809088 pseudo LOC102009451 archaemetzincin-2-like NW_004955403 30870358 30871472 + 102009451 AGCD01002408 MODEL 8853049 protein-coding Rhot2 ras homolog family member T2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); GDP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); mitochondrial outer membrane permeabilization (ortholog); mitochondrion transport along microtubule (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955442 16528886 16534856 - 102021053 AGCD01037901;GBCE01095142;XM_005391623;XM_005391624;XM_013517763 XP_005391680;XP_005391681;XP_013373217 MODEL 8854175 protein-coding Ptprr protein tyrosine phosphatase receptor type R ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN ERBB2 signaling pathway (ortholog); in utero embryonic development (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955405 10767548 11133695 - 102029696 AGCD01004822;AGCD01004823;AGCD01004824;AGCD01004825;AGCD01004826;AGCD01004827;GBDJ01213984;XM_005374316;XM_005374317 XP_005374373;XP_005374374 MODEL 8992853 protein-coding Arpp21 cAMP regulated phosphoprotein 21 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell differentiation (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Prostate Cancer (ortholog); Monomelic Amyotrophy (ortholog); FOUND IN cytoplasm (ortholog) NW_004955421 2681759 2838014 + 102024575 AGCD01021634;AGCD01021635;AGCD01021636;GBCB01043049;XM_005383661;XM_005383662;XM_005383663;XM_005383664;XM_005383665;XM_005383666;XM_005383667;XM_005383668;XM_005383669;XM_005383671;XM_005383672;XM_005383673;XM_005383675;XM_005383676;XM_013513804;XM_013513805;XM_013513806 XP_005383718;XP_005383719;XP_005383720;XP_005383721;XP_005383722;XP_005383723;XP_005383724;XP_005383725;XP_005383726;XP_005383728;XP_005383729;XP_005383730;XP_005383732;XP_005383733;XP_013369258;XP_013369259;XP_013369260 MODEL 39133375 snrna U4 U4 spliceosomal RNA 8906021 ncrna LOC102018850 uncharacterized LOC102018850 NW_004955427 23573541 23591628 - 102018850 AGCD01027486;XR_261286 MODEL 626189154 snorna SNORD88 Small nucleolar RNA SNORD88 8907597 pseudo LOC102006780 serine/threonine-protein phosphatase CPPED1 pseudogene NW_004955484 8142928 8153116 + 102006780 AGCD01058371 MODEL 9023157 pseudo LOC102026054 asparagine synthetase domain-containing protein 1 pseudogene NW_004955447 652287 654813 + 102026054 AGCD01040478 MODEL 8877649 protein-coding Emx2 empty spiracles homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); colorectal cancer (ortholog); esophagus adenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955431 22192446 22199141 + 102030337 AGCD01030511;GBDF01112545;XM_005387875 XP_005387932 MODEL 8877473 pseudo LOC102022180 uncharacterized protein C11orf57 pseudogene NW_004955466 12265025 12265773 + 102022180 AGCD01051118 MODEL 9050389 protein-coding Ppp2cb protein phosphatase 2 catalytic subunit beta ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN dopamine signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); FAR/SIP/STRIPAK complex (ortholog); nucleoplasm (ortholog) NW_004955463 7229717 7249490 - 102009155 AGCD01049725;GBCB01038556;XM_013521563 XP_013377017 MODEL 8768829 protein-coding Ccndbp1 cyclin D1 binding protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 9772823 9782047 + 102029620 AGCD01017099;GBDI01174921;XM_005381367 XP_005381424 MODEL 39132950 misc_rna Y_RNA Y RNA 8984891 protein-coding Iqgap2 IQ motif containing GTPase activating protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); calmodulin binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); regulation of actin cytoskeleton organization (ortholog); thrombin-activated receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); filopodium (ortholog) NW_004955425 24167985 24384912 - 102021575 AGCD01025879;AGCD01025880;AGCD01025881;AGCD01025882;AGCD01025883;AGCD01025884;AGCD01025885;GBDI01062233;XM_005386040;XM_013514848 XP_005386097;XP_013370302 MODEL 9021853 protein-coding Tlr1 toll like receptor 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipopeptide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN cellular response to triacyl bacterial lipopeptide (ortholog); defense response (ortholog); detection of triacyl bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH aspergillosis (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955443 8442419 8450318 + 102004332 AGCD01038326;GBBH01222008;GBCE01080086;XM_005391996 XP_005392053 MODEL 8780160 protein-coding Slc25a29 solute carrier family 25 member 29 ENCODES a protein that exhibits arginine:ornithine antiporter activity (ortholog); basic amino acid transmembrane transporter activity (ortholog); high-affinity L-arginine transmembrane transporter activity (ortholog); INVOLVED IN carnitine transport (ortholog); L-arginine transmembrane transport (ortholog); L-histidine transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955438 21383805 21393897 - 102018028 AGCD01035539;AGCD01035540;AGCD01035541;GBDF01015561;GBDI01129385;XM_013517271 XP_013372725 MODEL 10358993 ncrna LOC106147517 uncharacterized LOC106147517 NW_004955573 786062 790999 - 106147517 AGCD01075005;GBDF01080151;XR_001232441 MODEL 9049183 ncrna LOC102011435 uncharacterized LOC102011435 NW_004955414 23356883 23359067 - 102011435 AGCD01015497;XR_260190 MODEL 8958384 protein-coding Pom121l2 POM121 transmembrane nucleoporin like 2 NW_004955465 13175383 13178722 - 102003954 AGCD01050591;GBDF01007095;XM_005399007 XP_005399064 MODEL 8752460 protein-coding Frmd5 FERM domain containing 5 ENCODES a protein that exhibits integrin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of cell motility (ortholog); positive regulation of cell adhesion (ortholog); regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cerebellar ataxia (ortholog); FOUND IN adherens junction (ortholog) NW_004955416 10338061 10683069 - 102014245 AGCD01017135;AGCD01017136;AGCD01017137;AGCD01017138;AGCD01017139;AGCD01017140;AGCD01017141;AGCD01017142;AGCD01017143;AGCD01017144;AGCD01017145;AGCD01017146;AGCD01017147;AGCD01017148;AGCD01017149;AGCD01017150;AGCD01017151;GBDI01278383;XM_005381411;XM_005381412;XM_005381413;XM_005381414 XP_005381468;XP_005381469;XP_005381470;XP_005381471 MODEL 9039668 protein-coding Dhx30 DExH-box helicase 30 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); chromatin binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN central nervous system development (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); ASSOCIATED WITH astigmatism (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) NW_004955420 24537608 24549771 - 102012330 AGCD01021315;GBCE01115003;GBCQ01129787;XM_013513378 XP_013368832 MODEL 9052062 protein-coding Rasgrf1 Ras protein specific guanine nucleotide releasing factor 1 ENCODES a protein that exhibits glutamate receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cell population proliferation (ortholog); cellular response to antibiotic (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); Drug-Induced Dyskinesia (ortholog); FOUND IN apical dendrite (ortholog); apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955533 69736 167626 - 102012360 AGCD01070312;GBDK01432528;XM_005410378;XM_013507688;XM_013507689;XM_013507690 XP_005410435;XP_013363142;XP_013363143;XP_013363144 MODEL 8817137 protein-coding LOC102005343 cytochrome P450 2J2-like NW_004955457 13519513 13582133 + 102005343 AGCD01047047;AGCD01047048;AGCD01047049;GBCB01120042;XM_013520668 XP_013376122 MODEL 8974021 protein-coding Eid2 EP300 interacting inhibitor of differentiation 2 ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955468 29927 32947 + 102012945 AGCD01051675;AGCD01051676;GBCQ01164995;XM_005400282 XP_005400339 MODEL 8850500 protein-coding Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits U6 snRNA 3'-end binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); Lsm2-8 complex (ortholog) NW_004955429 16968490 16977517 + 102003790 AGCD01028843;GBCQ01039000;XM_005387060 XP_005387117 MODEL 8741438 protein-coding LOC102006414 uncharacterized LOC102006414 NW_004956036 9 5036 + 102006414 AGCD01078919;XM_005415164 XP_005415221 MODEL 8701837 protein-coding Cpn1 carboxypeptidase N subunit 1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN bradykinin catabolic process (ortholog); protein catabolic process (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH carboxypeptidase N deficiency (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955507 5926508 5952515 - 102019517 AGCD01065693;GBDK01395401;XM_005407682;XM_013506245 XP_005407739;XP_013361699 MODEL 9007293 protein-coding Sar1b secretion associated Ras related GTPase 1B ENCODES a protein that exhibits amino acid sensor activity (ortholog); G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to leucine starvation (ortholog); COPII vesicle coat assembly (ortholog); COPII-coated vesicle cargo loading (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955408 5737197 5761228 - 102018896 AGCD01008150;AGCD01008151;GBBH01186879;XM_005376158 XP_005376215 MODEL 10135398 ncrna LOC106148606 uncharacterized LOC106148606 NW_004955424 17263747 17270754 + 106148606 AGCD01024759;XR_001234238;XR_001234239 MODEL 8877656 protein-coding Pomc proopiomelanocortin ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; altered energy homeostasis pathway; altered melanocortin system pathway; ASSOCIATED WITH ACTH Syndrome, Ectopic (ortholog); acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955469 7217233 7220401 - 102003750 AGCD01052411;GBDF01002960;XM_005400399;XM_013522557 XP_005400456;XP_013378011 MODEL 39131613 rrna 5S_rRNA 5S ribosomal RNA 8963761 protein-coding Capn15 calpain 15 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); INVOLVED IN brain development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955442 16649600 16674252 - 102026482 AGCD01037905;GBDK01236677;XM_005391642;XM_005391643;XM_013517816;XM_013517817 XP_005391699;XP_005391700;XP_013373270;XP_013373271 MODEL 8929770 protein-coding Ddx21 DExD-box helicase 21 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of myeloid dendritic cell cytokine production (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN B-WICH complex (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955437 22050029 22071213 - 102027231 AGCD01034927;GBDI01113648;XM_005390100 XP_005390157 MODEL 8810455 protein-coding LOC102010649 zinc finger protein 134 NW_004955584 442199 447345 + 102010649 AGCD01075941;GBDF01124692;XM_005414366;XM_013509874;XM_013509875 XP_005414423;XP_013365328;XP_013365329 MODEL 39132171 rrna 5S_rRNA 5S ribosomal RNA 730468978 misc_rna Six3os1_5 Six3os1 conserved region 5 8771680 protein-coding Tas2r38 taste 2 receptor member 38 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Thiourea Tasting (ortholog); FOUND IN plasma membrane (ortholog) NW_004955494 1659692 1662712 + 102005055 AGCD01061419;XM_013505004 XP_013360458 MODEL 8906918 protein-coding LOC102005692 myosin-8 NW_004955467 6760351 6787249 + 102005692 AGCD01051422;AGCD01051423;GBBH01072423;GBCB01079090;XM_013522113 XP_013377567 MODEL 8769497 ncrna LOC102003554 uncharacterized LOC102003554 NW_004955420 23737531 23739070 - 102003554 AGCD01021255;GBBH01155304;XR_001233760;XR_260743 MODEL 8995172 protein-coding Tssk3 testis specific serine kinase 3 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955452 10690847 10693660 + 102022250 AGCD01044288;AGCD01044289;GBBH01077856;GBDF01000050;XM_005395066 XP_005395123 MODEL 8722175 protein-coding Rab3ip RAB3A interacting protein ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of filopodium assembly (ortholog); protein targeting to membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 10031333 10091438 + 102025971 AGCD01004802;AGCD01004803;AGCD01004804;AGCD01004805;AGCD01004806;AGCD01004807;GBBH01082375;GBDF01009098;XM_013517540 XP_013372994 MODEL 8702642 protein-coding Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); myoblast fusion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 3 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955578 1187128 1195574 + 102022981 AGCD01075511;GBDF01008859;XM_005414085;XM_005414086;XM_005414087;XM_005414088;XM_005414089;XM_005414090 XP_005414142;XP_005414143;XP_005414144;XP_005414145;XP_005414146;XP_005414147 MODEL 8985166 ncrna LOC102029973 uncharacterized LOC102029973 NW_004955486 4863590 4867976 - 102029973 AGCD01059070;GBDF01304265;XR_263953 MODEL 8742497 protein-coding Arr3 arrestin 3 ENCODES a protein that exhibits opsin binding (ortholog); phosphoprotein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN endocytosis (ortholog); negative regulation of opsin-mediated signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; visual phototransduction pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog); synapse (ortholog) NW_004955475 9819783 9835526 + 102022187 AGCD01055075;GBDK01348960;XM_005401617 XP_005401674 MODEL 8914555 ncrna LOC102003895 uncharacterized LOC102003895 NW_004955429 23679053 23685472 + 102003895 AGCD01029078;GBDF01277697;XR_001234522;XR_261397 MODEL 8760915 protein-coding F8 coagulation factor VIII INVOLVED IN blood coagulation, intrinsic pathway (ortholog); proteolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Adrenal Insufficiency (ortholog); aortic disease (ortholog); autoimmune disease (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955594 658686 800101 + 102027251 AGCD01076437;AGCD01076438;AGCD01076439;AGCD01076440;AGCD01076441;AGCD01076442;GBDK01080123;XM_005414663;XM_013509994;XM_013509995;XM_013509996;XM_013509997;XM_013509998;XM_013509999;XM_013510000;XM_013510001;XR_001232543 XP_005414720;XP_013365448;XP_013365449;XP_013365450;XP_013365451;XP_013365452;XP_013365453;XP_013365454;XP_013365455 MODEL 126903056 snorna SNORD88 Small nucleolar RNA SNORD88 8758778 pseudo LOC102006781 calmodulin pseudogene NW_004955420 5731109 5732180 - 102006781 AGCD01020679;XM_005383023 MODEL 8751525 protein-coding Ciao2b cytosolic iron-sulfur assembly component 2B INVOLVED IN chromosome segregation (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955433 23435373 23437383 - 102028007 AGCD01031962;GBDJ01268522;XM_005388490 XP_005388547 MODEL 8857313 protein-coding Bend2 BEN domain containing 2 INVOLVED IN chromatin organization (ortholog); double-strand break repair (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955519 104726 155418 + 102029432 AGCD01067855;GBDF01303209;XM_013506980;XM_013506981 XP_013362434;XP_013362435 MODEL 8946919 protein-coding LOC102007945 kallikrein-4-like NW_004955558 1622962 1627760 + 102007945 AGCD01073453;GBDF01079521;XM_013508853 XP_013364307 MODEL 8896919 protein-coding Iqgap3 IQ motif containing GTPase activating protein 3 ENCODES a protein that exhibits calmodulin binding (ortholog); myosin VI light chain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); lateral plasma membrane (ortholog) NW_004955545 2627334 2663786 - 102003382 AGCD01071914;AGCD01071915;GBDK01080432;XM_005411682;XM_013508311 XP_005411739;XP_013363765 MODEL 8816061 pseudo LOC102024226 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955479 9843625 9844159 + 102024226 AGCD01056499 MODEL 730469596 misc_rna Six3os1_7 Six3os1 conserved region 7 8749426 protein-coding Rhou ras homolog family member U ENCODES a protein that exhibits GTPase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); G1/S transition of mitotic cell cycle (ortholog); positive regulation of focal adhesion disassembly (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN focal adhesion (ortholog); Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955492 8949003 8955502 - 102027538 AGCD01060832;GBCB01088846;GBDJ01277125;XM_005405025 XP_005405082 MODEL 730469005 snorna SNORA67 Small nucleolar RNA SNORA67 8724109 ncrna LOC102018853 uncharacterized LOC102018853 NW_004955433 21601809 21606853 + 102018853 AGCD01031928;GBDF01290084;XR_261604 MODEL 8976513 ncrna LOC102025348 uncharacterized LOC102025348 NW_004955471 8707226 8728861 + 102025348 AGCD01053191;AGCD01053192;GBDK01310632;XR_001237062 MODEL 8893517 ncrna LOC102005345 uncharacterized LOC102005345 NW_004955460 7260247 7263228 + 102005345 AGCD01048480;GBDF01208870;XR_263036 MODEL 8830965 protein-coding LOC102026055 olfactory receptor 2C3-like NW_004955581 767883 769067 - 102026055 AGCD01075693;XM_005414269 XP_005414326 MODEL 39134407 misc_rna 7SK 7SK RNA 39132952 misc_rna Y_RNA Y RNA 8793514 protein-coding LOC102022181 taste receptor type 2 member 13-like NW_004955413 7940665 7941612 + 102022181 AGCD01013838;XM_013511293 XP_013366747 MODEL 8839748 protein-coding En1 engrailed homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cerebellum development (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); ENDOVE SYNDROME, LIMB-BRAIN TYPE (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955459 10839581 10844198 + 102008704 AGCD01048200;GBCB01074283;XM_005397707 XP_005397764 MODEL 9065642 pseudo LOC102009452 serine/arginine repetitive matrix protein 1 pseudogene NW_004955451 7812936 7823923 - 102009452 AGCD01043254 MODEL 8764969 protein-coding Ccne1 cyclin E1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); antral ovarian follicle growth (ortholog); cellular response to nutrient (ortholog); PARTICIPATES IN G1/S transition pathway; mTOR signaling pathway; ASSOCIATED WITH Bowen's Disease (ortholog); breast adenocarcinoma (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); cyclin E1-CDK2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955468 7803610 7814872 - 102010889 AGCD01052008;GBDF01123114;XM_005400106;XM_005400107 XP_005400163;XP_005400164 MODEL 8835092 protein-coding Slc25a3 solute carrier family 25 member 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); Mitochondrial Phosphate Carrier Deficiency (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955405 34584676 34591470 + 102030035 AGCD01005379;AGCD01005380;GBBH01000009;GBDJ01019336;XM_013518582;XM_013518583 XP_013374036;XP_013374037 MODEL 39132173 rrna 5S_rRNA 5S ribosomal RNA 8732835 ncrna LOC102006782 uncharacterized LOC102006782 NW_004955487 482152 483842 + 102006782 AGCD01059218;GBCE01175126;XR_001231161 MODEL 8858332 protein-coding Ptprs protein tyrosine phosphatase receptor type S ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparin binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN cerebellum development (ortholog); cerebral cortex development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); perikaryon (ortholog); plasma membrane (ortholog) NW_004955495 3943075 3991361 + 102029307 AGCD01061889;AGCD01061890;AGCD01061891;AGCD01061892;AGCD01061893;GBCB01088757;GBDF01128475;XM_013505293 XP_013360747 MODEL 39131415 protein-coding TAS2R38 taste 2 receptor member 38 8714655 protein-coding LOC102011437 phospholipid-transporting ATPase FetA-like NW_004955472 770636 868645 - 102011437 AGCD01053355;AGCD01053356;AGCD01053357;AGCD01053358;AGCD01053359;AGCD01053360;AGCD01053361;AGCD01053362;AGCD01053363;GBDK01126213;XM_005401014;XM_005401015;XM_013523039;XM_013523040;XM_013523041;XM_013523042;XM_013523043 XP_005401071;XP_005401072;XP_013378493;XP_013378494;XP_013378495;XP_013378496;XP_013378497 MODEL 39133377 snrna U4 U4 spliceosomal RNA 9036048 ncrna LOC102007947 uncharacterized LOC102007947 NW_004955443 8832249 8845558 - 102007947 AGCD01038338;GBDJ01378112;XR_001235447;XR_001235448;XR_262198;XR_262199 MODEL 8938752 protein-coding Tssk4 testis specific serine kinase 4 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); spermatid development (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN motile cilium (ortholog); sperm flagellum (ortholog) NW_004955409 36190182 36191801 - 102008068 AGCD01010450;GBDF01003132;GBDJ01396043;XM_013510407 XP_013365861 MODEL 8764834 protein-coding Rasgrf2 Ras protein specific guanine nucleotide releasing factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN long-term synaptic potentiation (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955418 28930666 29126495 - 102005807 AGCD01019448;AGCD01019449;AGCD01019450;AGCD01019451;AGCD01019452;AGCD01019453;GBDK01432521;XM_013512878 XP_013368332 MODEL 8822208 protein-coding CUNH16orf86 chromosome unknown C16orf86 homolog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955484 9013743 9015836 - 102025688 AGCD01058403;GBDF01045501;XM_013503956;XM_013503957;XM_013503958 XP_013359410;XP_013359411;XP_013359412 MODEL 8916565 ncrna LOC102006417 uncharacterized LOC102006417 NW_004955404 45816780 45821911 + 102006417 AGCD01004453;GBDF01094431;XR_259341 MODEL 8707038 protein-coding Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955458 14199912 14201712 + 102027496 AGCD01047829;GBDF01187898;GBDJ01087414;XM_013520977 XP_013376431 MODEL 8837703 protein-coding Saraf store-operated calcium entry associated regulatory factor INVOLVED IN regulation of store-operated calcium entry (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955463 6549495 6567589 - 102023238 AGCD01049684;GBDK01014827;XM_005398364 XP_005398421 MODEL 8759443 protein-coding Arrb1 arrestin beta 1 ENCODES a protein that exhibits alpha-1A adrenergic receptor binding (ortholog); alpha-1B adrenergic receptor binding (ortholog); angiotensin receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); desensitization of G protein-coupled receptor signaling pathway (ortholog); endocytosis (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arteriovenous Fistula (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basolateral plasma membrane (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955414 16478843 16568050 + 102027738 AGCD01015216;AGCD01015217;AGCD01015218;AGCD01015219;GBCE01053338;GBDJ01139745;XM_005379893 XP_005379950 MODEL 10322079 ncrna LOC106148607 uncharacterized LOC106148607 NW_004955424 12410443 12418061 + 106148607 AGCD01024604;GBCE01105320;XR_001234240 MODEL 8818519 protein-coding Tlr10 toll like receptor 10 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); pulmonary tuberculosis (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955443 8442439 8468966 + 102004650 AGCD01038326;AGCD01038327;XM_005391997;XM_013518055 XP_005392054;XP_013373509 MODEL 8754149 protein-coding LOC102013106 centrin-4-like NW_004955428 17966176 17970742 + 102013106 AGCD01028055;GBCQ01125606;XM_005386762;XM_005386763 XP_005386819;XP_005386820 MODEL 39133854 misc_rna 7SK 7SK RNA 9029394 protein-coding F9 coagulation factor IX ENCODES a protein that exhibits calcium ion binding (ortholog); endopeptidase activity (ortholog); metal ion binding (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); proteolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH autosomal hemophilia A (ortholog); blood coagulation disease (ortholog); factor VIII deficiency (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955489 5747718 5780899 - 102007779 AGCD01059946;XM_005404570 XP_005404627 MODEL 8887057 ncrna LOC102010653 uncharacterized LOC102010653 NW_004955403 10370654 10380440 + 102010653 AGCD01001921;GBDF01176244;XR_001234452;XR_001234453;XR_259166 MODEL 10229345 ncrna LOC106147518 uncharacterized LOC106147518 NW_004955408 28335484 28416983 - 106147518 AGCD01008711;XR_001232442 MODEL 9000065 pseudo LOC102005693 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955413 21622743 21623904 - 102005693 AGCD01014258 MODEL 8764643 ncrna LOC102022184 uncharacterized LOC102022184 NW_004955470 7992536 7997200 - 102022184 AGCD01052816;AGCD01052817;GBDF01304651;XR_263476 MODEL 8738542 pseudo LOC102012693 splicing factor, proline- and glutamine-rich pseudogene NW_004955442 15809374 15820619 - 102012693 AGCD01037879;XR_262171 MODEL 9032823 ncrna LOC102003556 uncharacterized LOC102003556 NW_004955420 28596394 28604005 + 102003556 AGCD01021480;AGCD01021481;GBBH01098605;XR_001233725;XR_001233726;XR_001233727;XR_001233728;XR_001233729;XR_001233730;XR_260767;XR_260768 MODEL 8757456 protein-coding Frmd6 FERM domain containing 6 INVOLVED IN apical constriction (ortholog); intracellular protein localization (ortholog); regulation of actin filament-based process (ortholog); ASSOCIATED WITH asthma (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN apical junction complex (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955409 11262456 11420892 - 102013059 AGCD01009502;AGCD01009503;AGCD01009504;GBDK01183805;XM_005376789;XM_005376790;XM_005376791;XM_013510329;XM_013510330 XP_005376846;XP_005376847;XP_005376848;XP_013365783;XP_013365784 MODEL 8840664 protein-coding Dhx32 DEAH-box helicase 32 (putative) ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955477 3720988 3778424 - 102009496 AGCD01055562;AGCD01055563;AGCD01055564;AGCD01055565;AGCD01055566;GBBH01050486;GBDJ01273219;XM_013503051 XP_013358505 MODEL 616940617 snorna SNORA68 Small nucleolar RNA SNORA68 8728771 protein-coding Iqsec1 IQ motif and Sec7 domain ArfGEF 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN dendritic spine development (ortholog); positive regulation of focal adhesion disassembly (ortholog); positive regulation of keratinocyte migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955429 13246585 13373189 + 102007255 AGCD01028739;AGCD01028740;AGCD01028741;AGCD01028742;GBBH01188484;GBDF01250621;XM_005386983;XM_005386985;XM_005386986;XM_005386987;XM_005386988;XM_005386989;XM_013515453;XM_013515455;XM_013515456;XM_013515457 XP_005387040;XP_005387042;XP_005387043;XP_005387044;XP_005387045;XP_005387046;XP_013370907;XP_013370909;XP_013370910;XP_013370911 MODEL 8719720 protein-coding Ppp2r1a protein phosphatase 2 scaffold subunit Aalpha ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein antigen binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN chromosome segregation (ortholog); female meiotic nuclear division (ortholog); meiotic sister chromatid cohesion, centromeric (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Adrenal Insufficiency (ortholog); astigmatism (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, centromeric region (ortholog) NW_004955558 381794 410485 + 102004524 AGCD01073369;GBBH01030900;XM_005412660 XP_005412717 MODEL 8761037 protein-coding LOC102003900 CSC1-like protein 1 NW_004955520 110432 115131 + 102003900 AGCD01068006;GBBH01033679;GBCC01001992;XM_013507053 XP_013362507 MODEL 39131614 rrna 5S_rRNA 5S ribosomal RNA 8984941 protein-coding Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); dentate gyrus development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); congenital muscular dystrophy (ortholog); congenital muscular dystrophy-dystroglycanopathy type A3 (ortholog); FOUND IN Golgi membrane (ortholog); membrane (ortholog) NW_004955464 12076815 12086961 + 102022683 AGCD01050179;AGCD01050180;GBBH01142608;GBCC01026286;XM_013521599 XP_013377053 MODEL 39131429 protein-coding TSSK4 testis specific serine kinase 4 730469020 snorna SNORD89 Small nucleolar RNA SNORD89 8750271 protein-coding LOC102007948 leukocyte immunoglobulin-like receptor subfamily B member 3 NW_004955567 1160961 1183994 + 102007948 AGCD01074460;AGCD01074461;GBCE01168958;XM_005413368;XM_013509271;XM_013509272;XM_013509273;XM_013509274;XM_013509275;XM_013509276;XM_013509277;XM_013509278 XP_005413425;XP_013364725;XP_013364726;XP_013364727;XP_013364728;XP_013364729;XP_013364730;XP_013364731;XP_013364732 MODEL 8761090 ncrna LOC102005347 uncharacterized LOC102005347 NW_004955411 1520955 1525362 + 102005347 AGCD01011485;GBDF01208789;XR_259910 MODEL 8903697 pseudo LOC102026058 60S ribosomal protein L7a pseudogene NW_004955449 10010072 10141311 + 102026058 AGCD01042064;AGCD01042065;AGCD01042066;AGCD01042067 MODEL 9021820 protein-coding Capn2 calpain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); calcium-dependent cysteine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN behavioral response to pain (ortholog); blastocyst development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Anthracycline-induced Cardiotoxicity (ortholog); FOUND IN calpain complex (ortholog); cell projection (ortholog); chromatin (ortholog) NW_004955520 1287829 1315318 - 102003055 AGCD01068050;GBCQ01012082;GBDK01013075;XM_013507063 XP_013362517 MODEL 8984501 protein-coding Ddx23 DEAD-box helicase 23 ENCODES a protein that exhibits helicase activity (ortholog); INVOLVED IN R-loop processing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); complex cortical dysplasia with other brain malformations 14B (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955500 7685954 7698880 - 102008435 AGCD01063940;AGCD01063941;GBCE01056276;XM_005406669;XM_005406670;XM_013505643 XP_005406726;XP_005406727;XP_013361097 MODEL 9018971 protein-coding Ciao3 cytosolic iron-sulfur assembly component 3 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); intracellular oxygen homeostasis (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955442 16465759 16475110 + 102018656 AGCD01037901;GBDK01237086;XM_005391615 XP_005391672 MODEL 8867892 protein-coding Bend3 BEN domain containing 3 ENCODES a protein that exhibits rDNA binding (ortholog); INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of ATP metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN heterochromatin (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955411 32346573 32384796 - 102008512 AGCD01012309;GBDF01161780;XM_005377836;XM_013510795;XM_013510796;XM_013510797 XP_005377893;XP_013366249;XP_013366250;XP_013366251 MODEL 9030976 protein-coding En2 engrailed homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic brain development (ortholog); gene expression (ortholog); hindbrain development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); esophageal cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955491 8422295 8427038 + 102006355 AGCD01060616;GBCQ01057725;XM_013504574 XP_013360028 MODEL 9003289 protein-coding Eid2b EP300 interacting inhibitor of differentiation 2B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of myoblast differentiation (ortholog); FOUND IN nucleus (ortholog) NW_004955468 48573 50029 + 102019996 AGCD01051677;GBCQ01058768;XM_005399765 XP_005399822 MODEL 9053529 protein-coding Slc25a30 solute carrier family 25 member 30 ENCODES a protein that exhibits solute:inorganic anion antiporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955518 3182085 3203061 + 102014937 AGCD01067795;GBCQ01178160;XM_005409085 XP_005409142 MODEL 8880456 protein-coding Rab40b RAB40B, member RAS oncogene family ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular detoxification (ortholog); negative regulation of actin filament bundle assembly (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); lamellipodium membrane (ortholog) NW_004955506 480236 509038 + 102006261 AGCD01065228;AGCD01065229;AGCD01065230;GBDI01219730;XM_005407186 XP_005407243 MODEL 8965656 protein-coding LOC102024232 small ubiquitin-related modifier 2-like NW_004955419 19430532 19431458 + 102024232 AGCD01020211;XM_013513265 XP_013368719 MODEL 8953366 protein-coding Cpn2 carboxypeptidase N subunit 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955420 14416308 14425945 + 102003140 AGCD01020944;AGCD01020945;GBCQ01091013;XM_005383197;XM_005383198 XP_005383254;XP_005383255 MODEL 8991966 protein-coding Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits PH domain binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH atherosclerosis (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Lsm2-8 complex (ortholog) NW_004955524 3157607 3165196 + 102022420 AGCD01068861;AGCD01068862;GBDF01050890;XM_005409570;XM_013507313 XP_005409627;XP_013362767 MODEL 8837887 protein-coding Rhov ras homolog family member V ASSOCIATED WITH cervical cancer (ortholog); stomach cancer (ortholog); urinary bladder cancer (ortholog); FOUND IN endosome membrane (ortholog); plasma membrane (ortholog) NW_004955416 7741762 7743816 - 102029074 AGCD01017008;GBDI01297240;XM_005381268 XP_005381325 MODEL 9052303 protein-coding LOC102022185 olfactory receptor 51H1-like NW_004955414 20166170 20167120 + 102022185 AGCD01015358;XM_013511716 XP_013367170 MODEL 8705101 protein-coding LOC102011438 octapeptide-repeat protein T2-like NW_004955414 22365294 22365779 - 102011438 AGCD01015455;XM_005380507 XP_005380564 MODEL 8846730 pseudo LOC102025350 mas-related G-protein coupled receptor member X1-like NW_004955414 33638100 33644821 - 102025350 AGCD01015816;AGCD01015817 MODEL 8949239 pseudo LOC102003901 epidermal growth factor receptor substrate 15 pseudogene NW_004955433 95292 97670 + 102003901 AGCD01031301 MODEL 8924180 protein-coding Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cytoplasmic stress granule disassembly (ortholog); erythrocyte differentiation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear speck (ortholog) NW_004955406 42190043 42199323 + 102020880 AGCD01006697;GBDF01047346;XM_005375399;XM_005375400;XM_005375402;XM_013502732 XP_005375456;XP_005375457;XP_005375459;XP_013358186 MODEL 9057942 ncrna LOC102010654 uncharacterized LOC102010654 NW_004955451 2820724 2842826 + 102010654 AGCD01043023;GBDF01304074;XR_262571 MODEL 8766688 protein-coding Ccne2 cyclin E2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN chromosome organization involved in meiotic cell cycle (ortholog); DNA replication initiation (ortholog); homologous chromosome pairing at meiosis (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); endometriosis (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cyclin E2-CDK2 complex (ortholog); nucleus (ortholog) NW_004955417 11027749 11039945 - 102029624 AGCD01018118;GBCQ01066155;XM_005381822 XP_005381879 MODEL 8784137 protein-coding Tlr2 toll like receptor 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acne (ortholog); acute kidney failure (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) NW_004955471 8011710 8019063 + 102006336 AGCD01053173;AGCD01053174;GBDF01040609;XM_005400927;XM_013522906 XP_005400984;XP_013378360 MODEL 8843659 pseudo LOC102029976 protein slowmo homolog 2-like NW_004955421 16299786 16300334 + 102029976 AGCD01021997 MODEL 8873469 ncrna LOC102006789 uncharacterized LOC102006789 NW_004955424 2250910 2258353 + 102006789 AGCD01024265;GBDF01111914;XR_261034 MODEL 8838666 protein-coding Fa2h fatty acid 2-hydroxylase ENCODES a protein that exhibits 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase activity (ortholog); fatty acid 2-hydroxylase activity (ortholog); free fatty acid 2-hydroxylase activity (ortholog); INVOLVED IN central nervous system myelin maintenance (ortholog); ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955484 2726496 2775763 + 102024680 AGCD01058129;AGCD01058130;AGCD01058131;GBDF01006028;XM_005403456 XP_005403513 MODEL 8826481 protein-coding Tas2r4 taste 2 receptor member 4 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); respiratory gaseous exchange by respiratory system (ortholog) NW_004955494 1790395 1791294 - 102006361 AGCD01061423;XM_005405532 XP_005405589 MODEL 8717521 protein-coding Capn3 calpain 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); catalytic activity (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); cellular response to calcium ion (ortholog); cellular response to salt stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Autosomal Dominant Limb-Girdle Muscular Dystrophy Type 4 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); myofibril (ortholog) NW_004955416 9070479 9121099 + 102021120 AGCD01017075;AGCD01017076;AGCD01017077;GBCB01004371;XM_005381335;XM_005381338;XM_005381339;XM_005381340;XM_005381342;XM_013512462;XM_013512463;XM_013512464;XM_013512466 XP_005381392;XP_005381395;XP_005381396;XP_005381397;XP_005381399;XP_013367916;XP_013367917;XP_013367918;XP_013367920 MODEL 39134408 misc_rna 7SK 7SK RNA 39132953 misc_rna Y_RNA Y RNA 9012150 protein-coding LOC102024233 glutathione S-transferase omega-2 NW_004955485 6370505 6390718 - 102024233 AGCD01058616;AGCD01058617;AGCD01058618;GBDF01002229;XM_005403780 XP_005403837 MODEL 39131615 rrna 5S_rRNA 5S ribosomal RNA 9022049 protein-coding Iqsec2 IQ motif and Sec7 domain ArfGEF 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of long-term synaptic depression (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); apraxia (ortholog); FOUND IN glutamatergic synapse (ortholog); photoreceptor ribbon synapse (ortholog); postsynaptic density (ortholog) NW_004955475 285977 369380 - 102013285 AGCD01054685;AGCD01054686;GBCQ01154978;GBDJ01235195;XM_005401487;XM_005401488;XM_013502863 XP_005401544;XP_005401545;XP_013358317 MODEL 9024009 ncrna LOC102009454 uncharacterized LOC102009454 NW_004955452 11752081 11769463 + 102009454 AGCD01044343;GBCB01079032;XR_262680 MODEL 8784437 protein-coding Ppp2r1b protein phosphatase 2 scaffold subunit Abeta INVOLVED IN apoptotic process involved in morphogenesis (ortholog); positive regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane raft (ortholog); synapse (ortholog) NW_004955412 13458078 13494583 - 102015938 AGCD01012836;AGCD01012837;AGCD01012838;GBDF01004755;XM_013511030;XM_013511031;XM_013511032;XM_013511033;XM_013511034;XM_013511035;XM_013511036;XM_013511037;XM_013511038 XP_013366484;XP_013366485;XP_013366486;XP_013366487;XP_013366488;XP_013366489;XP_013366490;XP_013366491;XP_013366492 MODEL 8921300 pseudo LOC102007950 tubulin-specific chaperone A-like NW_004955446 19105862 19111198 + 102007950 AGCD01040423 MODEL 8962711 ncrna LOC102013107 uncharacterized LOC102013107 NW_004955429 13692856 13696410 + 102013107 AGCD01028762;GBDF01283174;XR_261329 MODEL 9065147 protein-coding Tssk6 testis specific serine kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm DNA condensation (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); nucleus (ortholog); sperm flagellum (ortholog) NW_004955524 2433855 2434864 + 102014164 AGCD01068818;GBDF01008291;XM_005409638 XP_005409695 MODEL 39133855 misc_rna 7SK 7SK RNA 39132175 rrna 5S_rRNA 5S ribosomal RNA 10347013 ncrna LOC106147519 uncharacterized LOC106147519 NW_004955408 28421896 28449575 - 106147519 AGCD01008711;AGCD01008712;AGCD01008713;GBBH01014797;XR_001232443 MODEL 8765167 pseudo LOC102018855 60S ribosomal protein L12-like NW_004955435 12047641 12048394 + 102018855 AGCD01033133 MODEL 8904635 protein-coding LOC102012694 solute carrier organic anion transporter family member 5A1 NW_004955444 9855499 9886614 + 102012694 AGCD01038995;GBCQ01074693;XM_013518225 XP_013373679 MODEL 8782418 protein-coding Frmd7 FERM domain containing 7 INVOLVED IN negative regulation of stress fiber assembly (ortholog); positive regulation of lamellipodium assembly (ortholog); positive regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH Albinism (ortholog); congenital nystagmus 1 (ortholog); fundus dystrophy (ortholog); FOUND IN growth cone (ortholog); neuron projection (ortholog); neuronal cell body (ortholog) NW_004955473 2798736 2817770 + 102028740 AGCD01053907;XM_013523050 XP_013378504 MODEL 8729416 pseudo LOC102006418 biorientation of chromosomes in cell division protein 1 pseudogene NW_004955452 7619927 7620452 - 102006418 AGCD01044178 MODEL 9022670 protein-coding LOC102003559 HRAS-like suppressor 2 NW_004955422 21458082 21474996 + 102003559 AGCD01023119;AGCD01023120;AGCD01023121;GBBH01000367;XM_005384675;XM_013514294;XM_013514295;XM_013514296 XP_005384732;XP_013369748;XP_013369749;XP_013369750 MODEL 8773732 protein-coding CUNH16orf89 chromosome unknown C16orf89 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955442 12496862 12507655 + 102027576 AGCD01037737;GBDF01030121;XM_005391253;XM_005391254;XM_005391255 XP_005391310;XP_005391311;XP_005391312 MODEL 8968521 protein-coding Dhx33 DEAH-box helicase 33 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); double-stranded RNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN canonical inflammasome complex (ortholog); cytoplasm (ortholog); NLRP3 inflammasome complex (ortholog) NW_004955467 10797464 10819083 - 102028397 AGCD01051584;GBCQ01060054;XM_005399647 XP_005399704 MODEL 8914738 protein-coding Rasgrp1 RAS guanyl releasing protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); diacylglycerol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN B cell activation (ortholog); B cell proliferation (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); antiphospholipid syndrome (ortholog); endometriosis (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955416 5494030 5561608 - 102009602 AGCD01016914;GBCE01059250;GBDK01242028;XM_013512606 XP_013368060 MODEL 8900997 protein-coding Sardh sarcosine dehydrogenase ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); folic acid binding (ortholog); sarcosine dehydrogenase activity (ortholog); INVOLVED IN choline catabolic process (ortholog); glycine biosynthetic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN choline metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955513 2933918 2975645 - 102021472 AGCD01066892;GBBH01214329;XM_005408456;XM_013506717 XP_005408513;XP_013362171 MODEL 8881530 protein-coding LOC102022194 olfactory receptor 1J2-like NW_004955419 5338113 5339093 + 102022194 AGCD01019802;XM_005382920 XP_005382977 MODEL 8997293 protein-coding Arrb2 arrestin beta 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); alpha-1A adrenergic receptor binding (ortholog); alpha-1B adrenergic receptor binding (ortholog); INVOLVED IN adult walking behavior (ortholog); cell chemotaxis (ortholog); chemokine-mediated signaling pathway (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); Arteriovenous Fistula (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955467 10109985 10118687 + 102011639 AGCD01051546;GBDI01176626;XM_005399593;XM_013522131 XP_005399650;XP_013377585 MODEL 8735017 protein-coding LOC102011439 interferon-inducible GTPase 1-like NW_004955415 3743539 3769145 + 102011439 AGCD01015950;AGCD01015951;AGCD01015952;GBCB01074015;XM_005380561;XM_013512404 XP_005380618;XP_013367858 MODEL 9060418 pseudo LOC102026060 40S ribosomal protein S10 pseudogene NW_004955450 2685641 2686192 + 102026060 AGCD01042394 MODEL 8969950 ncrna LOC102005695 uncharacterized LOC102005695 NW_004955468 5827349 5829436 + 102005695 AGCD01051978;XR_263391 MODEL 39131616 rrna 5S_rRNA 5S ribosomal RNA 8859445 protein-coding LOC102013110 membrane-spanning 4-domains subfamily A member 12-like NW_004955511 4782390 4792412 - 102013110 AGCD01066526;XM_013506411 XP_013361865 MODEL 616940641 snorna SNORA69 Small nucleolar RNA SNORA69 8918152 protein-coding Eid3 EP300 interacting inhibitor of differentiation 3 FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955405 38897494 38898057 + 102011500 AGCD01005492;GBDF01050141;XM_005374672 XP_005374729 MODEL 8917941 protein-coding Enah ENAH actin regulator ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); WW domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actin polymerization or depolymerization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); filopodium (ortholog); focal adhesion (ortholog) NW_004955520 310482 374800 + 102030115 AGCD01068015;GBDI01069846;XM_013507016 XP_013362470 MODEL 8751678 protein-coding Slc25a31 solute carrier family 25 member 31 ENCODES a protein that exhibits ATP:ADP antiporter activity (ortholog); INVOLVED IN male meiosis I (ortholog); regulation of mitochondrial membrane permeability (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH stomach cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial permeability transition pore complex (ortholog) NW_004955428 13648753 13667133 - 102007921 AGCD01027960;GBDF01052354;XM_005386748 XP_005386805 MODEL 8753293 pseudo LOC102029979 60S ribosomal protein L21-like NW_004955490 9179792 9180282 - 102029979 AGCD01060306 MODEL 9029789 protein-coding Rhoxf1 Rhox homeobox family member 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); positive regulation of gene expression (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955534 39060 39570 + 102005840 AGCD01070432;XM_005410424 XP_005410481 MODEL 8851316 protein-coding Faah fatty acid amide hydrolase ENCODES a protein that exhibits amidase activity (ortholog); fatty acid amide hydrolase activity (ortholog); hydrolase activity, acting on ester bonds (ortholog); INVOLVED IN fatty acid catabolic process (ortholog); fatty acid metabolic process (ortholog); monoacylglycerol catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); cocaine dependence (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) NW_004955464 11873368 11885366 - 102003743 AGCD01050161;AGCD01050162;AGCD01050163;GBCB01043365;GBDJ01228395;XM_013521588 XP_013377042 MODEL 10063778 ncrna LOC106148608 uncharacterized LOC106148608 NW_004955424 20081940 20108034 - 106148608 AGCD01024843;AGCD01024844;AGCD01024845;GBDK01421419;XR_001234243;XR_001234244;XR_001234245;XR_001234246 MODEL 8888144 protein-coding LOC102012695 olfactory receptor 2Z1 ASSOCIATED WITH prostate cancer (ortholog) NW_004955563 779884 780825 - 102012695 AGCD01074088;XM_005413204 XP_005413261 MODEL 151707880 snorna SNORD89 Small nucleolar RNA SNORD89 8991424 pseudo LOC102005348 60S ribosomal protein L9-like NW_004955464 13057600 13058278 + 102005348 AGCD01050255 MODEL 9047503 protein-coding Pomgnt2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); protein O-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN neuron migration (ortholog); protein O-linked glycosylation (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A8 (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955420 27884262 27899293 + 102014572 AGCD01021462;GBCB01098321;XM_005383498;XM_005383499;XM_005383501;XM_013513533;XM_013513534;XR_001233753;XR_001233754;XR_001233755;XR_001233756;XR_001233757;XR_001233758;XR_001233759 XP_005383555;XP_005383556;XP_005383558;XP_013368987;XP_013368988 MODEL 8731137 pseudo LOC102022197 ribose-phosphate pyrophosphokinase 2 pseudogene NW_004955420 10011213 10017218 - 102022197 AGCD01020772 MODEL 8818755 protein-coding Six4 SIX homeobox 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); fungiform papilla morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955466 8902728 8915685 + 102014993 AGCD01051004;AGCD01051005;GBDI01052983;XM_005399170;XM_005399171;XM_005399172;XM_013521927 XP_005399227;XP_005399228;XP_005399229;XP_013377381 MODEL 39133378 snrna U4 U4 spliceosomal RNA 8770191 protein-coding Rasgrp2 RAS guanyl releasing protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955422 20426241 20440540 + 102003249 AGCD01023080;AGCD01023081;GBDJ01030510;GBDK01273984;XM_005384568 XP_005384625 MODEL 9063767 protein-coding LOC102010656 laminin subunit alpha-3-like NW_004955649 79435 83763 - 102010656 AGCD01077784;AGCD01077785;GBDI01289779;GBDJ01229315;XM_013510173 XP_013365627 MODEL 8866819 protein-coding Iqsec3 IQ motif and Sec7 domain ArfGEF 3 INVOLVED IN postsynapse organization (ortholog); regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); GABA-ergic synapse (ortholog); glycinergic synapse (ortholog) NW_004955454 6978317 7079490 - 102028823 AGCD01045274;AGCD01045275;AGCD01045276;GBDF01289579;XM_013520013 XP_013375467 MODEL 9051705 protein-coding Dyrk4 dual specificity tyrosine phosphorylation regulated kinase 4 ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955413 2359480 2410395 + 102003640 AGCD01013544;AGCD01013545;XM_005378732;XM_005378733;XM_013511555;XM_013511556;XM_013511557;XM_013511558;XM_013511559;XM_013511560;XM_013511561;XM_013511562;XM_013511563;XM_013511565;XM_013511566;XM_013511567 XP_005378789;XP_005378790;XP_013367009;XP_013367010;XP_013367011;XP_013367012;XP_013367013;XP_013367014;XP_013367015;XP_013367016;XP_013367017;XP_013367019;XP_013367020;XP_013367021 MODEL 39133856 misc_rna 7SK 7SK RNA 8705831 protein-coding Ccnf cyclin F ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of centrosome duplication (ortholog); placenta development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955442 14864935 14890802 - 102011053 AGCD01037845;AGCD01037846;GBBH01183568;GBDF01001353;XM_013518018 XP_013373472 MODEL 8781093 protein-coding Tas2r40 taste 2 receptor member 40 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) NW_004955494 415607 416569 - 102025474 AGCD01061376;XM_005405364 XP_005405421 MODEL 8982690 protein-coding Rab40c RAB40C, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cell migration (ortholog); lipid droplet formation (ortholog); negative regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); epilepsy (ortholog); esophageal cancer (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955442 16577843 16614132 - 102024512 AGCD01037901;AGCD01037902;AGCD01037903;GBCE01155373;GBCQ01129291;XM_005391634 XP_005391691 MODEL 8749631 protein-coding Cpne1 copine 1 ENCODES a protein that exhibits calcium ion binding (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); negative regulation of gene expression (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955422 25793841 25837680 + 102007441 AGCD01023269;GBDI01081464;XM_005384779;XM_005384782;XM_005384783;XM_013514123;XM_013514124;XM_013514125 XP_005384836;XP_005384839;XP_005384840;XP_013369577;XP_013369578;XP_013369579 MODEL 9024498 protein-coding Ptprt protein tyrosine phosphatase receptor type T ENCODES a protein that exhibits alpha-actinin binding (ortholog); alpha-catenin binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to interleukin-6 (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955445 14185751 14961000 + 102026919 AGCD01039812;AGCD01039813;AGCD01039814;AGCD01039815;AGCD01039816;AGCD01039817;AGCD01039818;AGCD01039819;AGCD01039820;AGCD01039821;AGCD01039822;AGCD01039823;AGCD01039824;AGCD01039825;AGCD01039826;AGCD01039827;AGCD01039828;GBCE01157673;XM_005392501;XM_013518366 XP_005392558;XP_013373820 MODEL 9047271 protein-coding Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); response to bacterium (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) NW_004955617 42829 47999 - 102006525 AGCD01077267;GBDK01241807;XM_005414987 XP_005415044 MODEL 9010386 protein-coding Capn5 calpain 5 INVOLVED IN granulosa cell differentiation (ortholog); luteinization (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN cell surface (ortholog); synapse (ortholog) NW_004955414 14652578 14706833 - 102011859 AGCD01015155;GBCE01186015;XM_005379843;XM_005379844;XM_005379845 XP_005379900;XP_005379901;XP_005379902 MODEL 39134409 misc_rna 7SK 7SK RNA 8972145 protein-coding LOC102029982 olfactory receptor 4C45-like NW_004955422 215524 216453 + 102029982 AGCD01022401;XM_005384931 XP_005384988 MODEL 8979061 protein-coding LOC102003561 BPI fold-containing family A member 2-like NW_004955422 27993083 28136036 + 102003561 AGCD01023340;AGCD01023341;AGCD01023342;AGCD01023343;GBBH01222071;XM_005384852;XM_013514264;XM_013514265;XM_013514266;XM_013514267;XM_013514268;XM_013514269;XM_013514270;XM_013514271;XM_013514273;XM_013514274;XM_013514275 XP_005384909;XP_013369718;XP_013369719;XP_013369720;XP_013369721;XP_013369722;XP_013369723;XP_013369724;XP_013369725;XP_013369727;XP_013369728;XP_013369729 MODEL 8945015 protein-coding LOC102003903 ADP-ribosylation factor-like protein 4A NW_004955436 16294434 16295575 - 102003903 AGCD01033912;GBDF01008117;XM_005389238 XP_005389295 MODEL 8864807 protein-coding Dhx34 DExH-box helicase 34 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); positive regulation of phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955574 1248058 1267399 + 102009334 AGCD01075171;GBDJ01135621;XM_005413866;XM_013509536;XM_013509537 XP_005413923;XP_013364990;XP_013364991 MODEL 8948625 protein-coding Bend4 BEN domain containing 4 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); melanoma (ortholog) NW_004955443 5593351 5613569 + 102009230 AGCD01038242;GBBH01170689;XM_005391922 XP_005391979 MODEL 8739963 protein-coding LOC102007951 cytochrome P450 3A9-like NW_004955573 1323275 1354705 - 102007951 AGCD01075041;AGCD01075042;AGCD01075043;AGCD01075044;XM_013509451 XP_013364905 MODEL 8802521 protein-coding Ppp2r2a protein phosphatase 2 regulatory subunit Balpha ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN regulation of chromosome segregation (ortholog); response to morphine (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Chromosomal Instability (ortholog); colon adenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); protein phosphatase type 2A complex (ortholog); protein serine/threonine phosphatase complex (ortholog) NW_004955403 49042188 49113743 + 102026933 AGCD01002935;GBCB01025310;GBDI01135179;XM_013514116 XP_013369570 MODEL 8888458 protein-coding Tst thiosulfate sulfurtransferase ENCODES a protein that exhibits 5S rRNA binding (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (ortholog); epithelial cell differentiation (ortholog); rRNA import into mitochondrion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colitis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 23528468 23534890 - 102025559 AGCD01014332;GBCB01007472;XM_005379180 XP_005379237 MODEL 39132177 rrna 5S_rRNA 5S ribosomal RNA 8833003 ncrna LOC102011440 uncharacterized LOC102011440 NW_004955476 3980903 3992756 - 102011440 AGCD01055264;GBDF01249578;XR_263619 MODEL 8936907 ncrna LOC102006792 uncharacterized LOC102006792 NW_004955424 19657877 19669500 - 102006792 AGCD01024832;GBBH01074895;XR_001234252;XR_261085 MODEL 8940730 protein-coding Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) NW_004955428 1931684 1944445 + 102010075 AGCD01027626;GBDI01078048;XM_005386661;XM_005386662 XP_005386718;XP_005386719 MODEL 8972812 protein-coding LOC102026064 L-threonine 3-dehydrogenase, mitochondrial-like NW_004955403 52745241 52753896 + 102026064 AGCD01003017;GBCE01040737;GBDF01306332;XM_013514503 XP_013369957 MODEL 10202658 protein-coding LOC106147520 cytochrome P450 3A14 NW_004955573 1424278 1477714 - 106147520 AGCD01075050;AGCD01075051;AGCD01075052;AGCD01075053;AGCD01075054;AGCD01075055;AGCD01075056;AGCD01075057;GBBH01209737;GBCQ01052951;XM_013509482 XP_013364936 MODEL 9064773 protein-coding Tlr3 toll like receptor 3 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); identical protein binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); cellular response to interferon-beta (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); alcohol dependence (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955403 22977882 23001392 - 102019229 AGCD01002237;AGCD01002238;GBDK01060740;XM_005373437;XM_005373438;XM_005373439;XM_005373440;XM_013512872 XP_005373494;XP_005373495;XP_005373496;XP_005373497;XP_013368326 MODEL 9029641 ncrna LOC102025352 uncharacterized LOC102025352 NW_004955415 29717377 29729552 + 102025352 AGCD01016654;GBBH01180208;XR_260323 MODEL 9052841 pseudo LOC102013112 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955514 556735 557501 + 102013112 AGCD01067014 MODEL 730469202 snorna SNORA7 Small nucleolar RNA SNORA7 8897076 protein-coding LOC102006419 intestinal-type alkaline phosphatase-like NW_004955453 3542300 3545477 - 102006419 AGCD01044663;AGCD01044664;XM_013519762 XP_013375216 MODEL 9044833 protein-coding Enam enamelin ENCODES a protein that exhibits structural constituent of tooth enamel (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1B (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955447 2331251 2345459 - 102025189 AGCD01040538;JN414625;XM_013518491 AEP18526;XP_013373945 MODEL 8879098 protein-coding Eif1 eukaryotic translation initiation factor 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN positive regulation of mRNA cis splicing, via spliceosome (ortholog); regulation of translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic 43S preinitiation complex (ortholog); eukaryotic 48S preinitiation complex (ortholog) NW_004955451 15978571 15980352 + 102025315 AGCD01043645;GBBH01003705;GBDK01012882;XM_013519437 XP_013374891 MODEL 8976092 protein-coding Ddx24 DEAD-box helicase 24 PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955438 16100345 16116377 - 102011698 AGCD01035395;GBCB01039889;XM_005390365 XP_005390422 MODEL 8822132 protein-coding Slc25a32 solute carrier family 25 member 32 ENCODES a protein that exhibits FAD transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial FAD transmembrane transport (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Exercise Intolerance (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955417 27530806 27545103 - 102021443 AGCD01018559;GBBH01025020;XM_013512707 XP_013368161 MODEL 8771395 protein-coding Frmd8 FERM domain containing 8 INVOLVED IN positive regulation of tumor necrosis factor production (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955422 19830211 19848653 - 102009514 AGCD01023040;GBDF01223631;XM_005384493;XM_005384495 XP_005384550;XP_005384552 MODEL 9001139 ncrna LOC102024234 uncharacterized LOC102024234 NW_004955420 11214960 11288694 - 102024234 AGCD01020801;GBBH01078303;XR_260703 MODEL 9067841 protein-coding Ciapin1 cytokine induced apoptosis inhibitor 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); iron ion binding (ortholog); INVOLVED IN hemopoiesis (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955433 15065031 15081392 - 102027104 AGCD01031745;GBBH01165720;XM_005388390;XM_005388391;XM_013516203;XM_013516204;XM_013516205 XP_005388447;XP_005388448;XP_013371657;XP_013371658;XP_013371659 MODEL 10225377 ncrna LOC106148609 uncharacterized LOC106148609 NW_004955424 15159116 15173747 - 106148609 AGCD01024694;AGCD01024695;XR_001234247 MODEL 8927241 protein-coding Arrdc1 arrestin domain containing 1 ENCODES a protein that exhibits arrestin family protein binding (ortholog); identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN extracellular transport (ortholog); extracellular vesicle biogenesis (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular exosome (ortholog); extracellular vesicle (ortholog) NW_004955513 5479468 5486489 + 102004308 AGCD01066973;GBCB01121940;GBDI01061781;XM_013506657 XP_013362111 MODEL 9027960 protein-coding Ptpru protein tyrosine phosphatase receptor type U ENCODES a protein that exhibits beta-catenin binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); homotypic cell-cell adhesion (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog) NW_004955452 8223773 8296769 + 102026069 AGCD01044212;AGCD01044213;AGCD01044214;GBDJ01076331;XM_005394989;XM_005394992;XM_005394993;XM_013519598;XM_013519599;XM_013519600 XP_005395046;XP_005395049;XP_005395050;XP_013375052;XP_013375053;XP_013375054 MODEL 39131617 rrna 5S_rRNA 5S ribosomal RNA 8896777 protein-coding CUNH16orf90 chromosome unknown C16orf90 homolog ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955442 13890284 13892362 + 102024618 AGCD01037795;GBDF01062070;XM_005391341;XM_005391342 XP_005391398;XP_005391399 MODEL 39133857 misc_rna 7SK 7SK RNA 8928760 protein-coding Rab42 RAB42, member RAS oncogene family ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); sarcoma (ortholog) NW_004955452 7673187 7676293 + 102019977 AGCD01044180;AGCD01044181;GBCE01167668;GBDJ01214087;XM_013519491 XP_013374945 MODEL 8989021 protein-coding Sarm1 sterile alpha and TIR motif containing 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); identical protein binding (ortholog); NAD+ nucleosidase activity (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); NAD+ catabolic process (ortholog); nervous system process (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955481 4743458 4763766 - 102004279 AGCD01056950;AGCD01056951;GBCE01145647;XM_005402754 XP_005402811 MODEL 8869025 protein-coding Cpne2 copine 2 INVOLVED IN cellular response to calcium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955433 14766247 14808916 + 102021791 AGCD01031728;AGCD01031729;GBBH01093238;GBDF01188029;XM_005388373 XP_005388430 MODEL 8996401 protein-coding LOC102009461 immunoglobulin omega chain-like NW_004955455 6648451 6649016 + 102009461 AGCD01045803;XM_005396575 XP_005396632 MODEL 8852310 pseudo LOC102003562 olfactory receptor 140-like NW_004955422 257720 265363 - 102003562 AGCD01022401 MODEL 10260258 ncrna LOC106148610 uncharacterized LOC106148610 NW_004955424 15171271 15174786 + 106148610 AGCD01024695;XR_001234248 MODEL 39133379 snrna U4 U4 spliceosomal RNA 8955665 protein-coding LOC102007953 olfactory receptor 2B6-like NW_004955576 1156143 1157078 + 102007953 AGCD01075361;XM_005413942 XP_005413999 MODEL 8841304 protein-coding Enc1 ectodermal-neural cortex 1 INVOLVED IN negative regulation of translation (ortholog); positive regulation of neuron projection development (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955425 26017684 26029262 + 102003987 AGCD01025940;GBDF01251229;XM_005386066 XP_005386123 MODEL 39132179 rrna 5S_rRNA 5S ribosomal RNA 9034724 protein-coding Six5 SIX homeobox 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH branchiootorenal syndrome (ortholog); branchiootorenal syndrome 2 (ortholog); vesicoureteral reflux (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955574 221635 225474 - 102016326 AGCD01075092;AGCD01075093;GBBH01185502;GBCE01137897;XM_013509516 XP_013364970 MODEL 9060419 protein-coding LOC102026065 cytoskeleton-associated protein 2-like NW_004955403 5756594 5789342 - 102026065 AGCD01001820;XM_013514731 XP_013370185 MODEL 8994483 protein-coding Tstd1 thiosulfate sulfurtransferase like domain containing 1 ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955468 12813116 12814651 - 102024208 AGCD01052189;GBDF01162197;XM_005400229;XM_013522524;XM_013522525 XP_005400286;XP_013377978;XP_013377979 MODEL 9019949 protein-coding Ppp2r2b protein phosphatase 2 regulatory subunit Bbeta ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mitochondrial fission (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); neuron differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain disease (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955415 7054296 7510179 + 102013283 AGCD01016035;AGCD01016036;AGCD01016037;AGCD01016038;AGCD01016039;AGCD01016040;AGCD01016041;AGCD01016042;AGCD01016043;AGCD01016044;GBDF01195584;XM_005380663;XM_005380664;XM_005380665;XM_013512388 XP_005380720;XP_005380721;XP_005380722;XP_013367842 MODEL 8988098 protein-coding Faah2 fatty acid amide hydrolase 2 ENCODES a protein that exhibits fatty acid amide hydrolase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); Breast Cancer, Familial (ortholog) NW_004955475 3593062 3734920 - 102029856 AGCD01054847;AGCD01054848;AGCD01054849;AGCD01054850;AGCD01054851;AGCD01054852;GBDK01429828;XM_005401548 XP_005401605 MODEL 9020311 protein-coding Dysf dysferlin ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to osmotic stress (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955424 13756130 13970437 - 102025026 AGCD01024637;AGCD01024638;AGCD01024639;AGCD01024640;GBDJ01131542;XM_005385587;XM_005385588;XM_005385589;XM_005385590;XM_005385591;XM_005385592;XM_005385593;XM_005385594;XM_005385595;XM_005385596;XM_005385597;XM_005385598;XM_005385599;XM_005385600;XM_013514696;XM_013514697 XP_005385644;XP_005385645;XP_005385646;XP_005385647;XP_005385648;XP_005385649;XP_005385650;XP_005385651;XP_005385652;XP_005385653;XP_005385654;XP_005385655;XP_005385656;XP_005385657;XP_013370150;XP_013370151 MODEL 8728342 ncrna LOC102012697 uncharacterized LOC102012697 NW_004955445 18404493 18440417 + 102012697 AGCD01039904;GBDF01229799;XR_262357 MODEL 10310678 ncrna LOC106148611 uncharacterized LOC106148611 NW_004955424 19655227 19657857 - 106148611 AGCD01024832;GBBH01070504;XR_001234251 MODEL 9055526 ncrna LOC102005350 uncharacterized LOC102005350 NW_004955465 6890152 6891671 + 102005350 AGCD01050449;GBCB01123633;XR_263244 MODEL 39131707 snorna SNORD90 Small nucleolar RNA SNORD90 39134410 misc_rna 7SK 7SK RNA 9014271 ncrna LOC102006421 uncharacterized LOC102006421 NW_004955455 10924743 10925491 + 102006421 AGCD01045967;GBDF01002624;XR_262854 MODEL 8858830 protein-coding LOC102018858 olfactory receptor 2A5-like NW_004955537 2612449 2613549 - 102018858 AGCD01070933;XM_005410627 XP_005410684 MODEL 8767344 protein-coding LOC102022198 sperm-associated antigen 4 protein-like NW_004955422 29464795 29468790 + 102022198 AGCD01023397;GBDF01000375;XM_005384914;XM_005384915;XM_005384916;XM_005384917 XP_005384971;XP_005384972;XP_005384973;XP_005384974 MODEL 8756689 ncrna LOC102003910 uncharacterized LOC102003910 NW_004955547 2449218 2452224 + 102003910 AGCD01072281;GBDF01261280;XR_001232226;XR_001232227;XR_264909 MODEL 8803349 pseudo LOC102029984 BH3-interacting domain death agonist pseudogene NW_004955424 2014996 2015759 + 102029984 AGCD01024258;XM_005385428 MODEL 9005830 protein-coding LOC102024236 uncharacterized LOC102024236 NW_004955486 4140771 4144719 - 102024236 AGCD01059055;GBDI01207893;GBDK01042435;XM_013504281 XP_013359735 MODEL 8792325 protein-coding Dhx35 DEAH-box helicase 35 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); in utero embryonic development (ortholog); positive regulation of interferon-beta production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955445 17753975 17827748 - 102007949 AGCD01039896;GBCB01099680;XM_005392524 XP_005392581 MODEL 9020721 pseudo LOC102010667 60S acidic ribosomal protein P2 pseudogene NW_004955453 8336273 8336716 - 102010667 AGCD01044760;XM_005395716 MODEL 8969888 protein-coding Frmpd1 FERM and PDZ domain containing 1 INVOLVED IN cell-cell signaling (ortholog); chemical synaptic transmission (ortholog); establishment of protein localization to membrane (ortholog); ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); hepatoblastoma (ortholog); melanoma (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955419 28717277 28888486 - 102003138 AGCD01020473;AGCD01020474;AGCD01020475;AGCD01020476;AGCD01020477;AGCD01020478;AGCD01020479;GBDI01165768;XM_005382863;XM_005382864;XM_005382865;XM_005382866;XM_013513180 XP_005382920;XP_005382921;XP_005382922;XP_005382923;XP_013368634 MODEL 8885025 protein-coding Sarnp SAP domain containing ribonucleoprotein ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); myopathy (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); transcription export complex (ortholog) NW_004955458 3396443 3451193 - 102021210 AGCD01047301;AGCD01047302;GBDJ01421628;XM_005397259;XR_262968 XP_005397316 MODEL 8764700 protein-coding Rasgrp3 RAS guanyl releasing protein 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); kinase binding (ortholog); INVOLVED IN Ras protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); guanyl-nucleotide exchange factor complex (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955441 1679258 1786397 + 102025514 AGCD01036756;AGCD01036757;GBCE01012394;XM_005390850;XM_005390851;XM_005390852;XM_005390853;XM_005390854;XM_005390855;XM_005390856;XM_013517629 XP_005390907;XP_005390908;XP_005390909;XP_005390910;XP_005390911;XP_005390912;XP_005390913;XP_013373083 MODEL 8999277 protein-coding Rhpn1 rhophilin Rho GTPase binding protein 1 INVOLVED IN focal adhesion assembly (ortholog); glomerular filtration (ortholog); kidney development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cell periphery (ortholog); plasma membrane (ortholog) NW_004955454 2086054 2099018 + 102029823 AGCD01045009;GBDF01155289;XM_005395768 XP_005395825 MODEL 8792067 protein-coding Yae1 YAE1 maturation factor of ABCE1 INVOLVED IN protein maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955460 3900245 3904430 - 102018809 AGCD01048422;GBDF01046538;XM_005397731;XM_005397732;XM_013521094 XP_005397788;XP_005397789;XP_013376548 MODEL 9038886 protein-coding LOC102006793 melanoma-associated antigen 10-like NW_004955498 6957142 6971415 - 102006793 AGCD01063139;GBDF01251928;XM_005406437;XM_013505537;XM_013505538 XP_005406494;XP_013360991;XP_013360992 MODEL 8941533 protein-coding Tas2r5 taste 2 receptor member 5 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) NW_004955494 1775222 1776226 - 102006041 AGCD01061422;XM_005405531 XP_005405588 MODEL 10098289 ncrna LOC106147521 uncharacterized LOC106147521 NW_004955408 28415162 28423366 + 106147521 AGCD01008711;XR_001232444 MODEL 8913203 protein-coding Ccng1 cyclin G1 INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of apoptotic process (ortholog); response to gravity (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); breast adenocarcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); nucleoplasm (ortholog) NW_004955408 16846050 16850365 + 102004566 AGCD01008447;GBCE01003446;GBDJ01016073;XM_005376279 XP_005376336 MODEL 8965657 pseudo LOC102025357 caspase-3-like NW_004955417 10514744 10515995 + 102025357 AGCD01018075;AGCD01018076 MODEL 39131618 rrna 5S_rRNA 5S ribosomal RNA 9012315 protein-coding Tlr4 toll like receptor 4 ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); astrocyte development (ortholog); B cell proliferation involved in immune response (ortholog); PARTICIPATES IN titanium dioxide nanoparticle response pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acanthamoeba Keratitis (ortholog); Acne Conglobata (ortholog); Acute Coronary Syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) NW_004955419 10190937 10201896 - 102030080 AGCD01019939;GBBH01209662;XM_005382606 XP_005382663 MODEL 8897035 protein-coding Capn6 calpain 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); regulation of cytoskeleton organization (ortholog); ASSOCIATED WITH essential tremor (ortholog); hypertension (ortholog); lung cancer (ortholog); FOUND IN microtubule (ortholog); perinuclear region of cytoplasm (ortholog); spindle microtubule (ortholog) NW_004955490 4499888 4526060 + 102005385 AGCD01060188;GBDF01112329;XM_005404646 XP_005404703 MODEL 8991955 protein-coding Slc25a33 solute carrier family 25 member 33 ENCODES a protein that exhibits pyrimidine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); mitochondria-nucleus signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955486 3905001 3921501 - 102022298 AGCD01059044;GBBH01118527;GBCB01072973;XM_013504167 XP_013359621 MODEL 8947018 protein-coding Pomk protein O-mannose kinase ENCODES a protein that exhibits carbohydrate kinase activity (ortholog); phosphotransferase activity, alcohol group as acceptor (ortholog); INVOLVED IN brain development (ortholog); carbohydrate phosphorylation (ortholog); learning or memory (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A12 (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955457 13299176 13318535 + 102014324 AGCD01047040;AGCD01047041;GBDF01222484;XM_005397077;XM_005397078;XM_013520674;XM_013520675 XP_005397134;XP_005397135;XP_013376128;XP_013376129 MODEL 9051992 pseudo LOC102009463 cordon-bleu protein-like 1 NW_004955407 25359436 25360666 + 102009463 AGCD01007501 MODEL 8730281 protein-coding Ciart circadian associated repressor of transcription ENCODES a protein that exhibits E-box binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); locomotor rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) NW_004955413 490117 494332 - 102017111 AGCD01013472;GBDF01020471;XM_005378693;XM_013511464;XM_013511465;XM_013511466 XP_005378750;XP_013366918;XP_013366919;XP_013366920 MODEL 10085659 protein-coding Bend5 BEN domain containing 5 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955464 9952128 9997938 + 106146240 AGCD01050118;GBDF01262049;XM_005398627;XM_013521736;XM_013521737 XP_005398684;XP_013377190;XP_013377191 MODEL 8822599 ncrna LOC102011444 uncharacterized LOC102011444 NW_004955417 7040994 7068069 - 102011444 AGCD01017997;GBDF01260563;XR_260460 MODEL 8757439 protein-coding Iqub IQ motif and ubiquitin domain containing INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); mating (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN 9+2 motile cilium (ortholog); acrosomal vesicle (ortholog); motile cilium (ortholog) NW_004955479 4988718 5059800 - 102012757 AGCD01056340;GBDF01085432;XM_005402325 XP_005402382 MODEL 9007500 protein-coding Arrdc3 arrestin domain containing 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); INVOLVED IN fat pad development (ortholog); negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955418 20538858 20550876 + 102029968 AGCD01019234;AGCD01019235;AGCD01019236;GBBH01061457;GBCQ01007358;XM_013513045 XP_013368499 MODEL 8949389 ncrna LOC102013113 uncharacterized LOC102013113 NW_004955432 22553707 22573140 - 102013113 AGCD01031262;GBDJ01369374;XR_001234681;XR_001234682;XR_001234683;XR_001234684;XR_001234685;XR_001234686;XR_001234687;XR_001234688;XR_001234689 MODEL 9008992 protein-coding Ptprz1 protein tyrosine phosphatase receptor type Z1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); integrin binding (ortholog); phosphatase activity (ortholog); INVOLVED IN axonal fasciculation (ortholog); axonogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic spine (ortholog) NW_004955479 3611658 3734225 + 102021008 AGCD01056301;GBDI01323065;XM_013503257 XP_013358711 MODEL 8807450 protein-coding Dhx36 DEAH-box helicase 36 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); DNA helicase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to arsenite ion (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955448 5634072 5676272 - 102012706 AGCD01041373;GBDJ01388906;XM_005393058;XM_013518656 XP_005393115;XP_013374110 MODEL 730469402 snorna SNORA7 Small nucleolar RNA SNORA7 9000066 pseudo LOC102005697 calcyclin-binding protein pseudogene NW_004955414 19427986 19428570 + 102005697 AGCD01015315 MODEL 8705787 protein-coding CUNH16orf96 chromosome unknown C16orf96 homolog ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955442 12834662 12879308 - 102009323 AGCD01037747;AGCD01037748;GBDK01184197;XM_005391288;XM_005391289;XM_013517721;XM_013517722 XP_005391345;XP_005391346;XP_013373175;XP_013373176 MODEL 8749961 protein-coding Sars1 seryl-tRNA synthetase 1 ENCODES a protein that exhibits enzyme binding (ortholog); molecular adaptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955435 12642485 12659833 + 102025160 AGCD01033160;AGCD01033161;GBDF01045746;XM_005388851;XM_013516442 XP_005388908;XP_013371896 MODEL 8816594 protein-coding Rasgrp4 RAS guanyl releasing protein 4 ENCODES a protein that exhibits diacylglycerol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of natural killer cell mediated immunity (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955468 1007082 1020744 + 102013157 AGCD01051748;GBDK01016923;XM_005399844;XM_013522410;XM_013522411;XM_013522412 XP_005399901;XP_013377864;XP_013377865;XP_013377866 MODEL 8734527 protein-coding Eif1ad eukaryotic translation initiation factor 1A domain containing ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 19339111 19343673 + 102021773 AGCD01023001;GBCQ01035749;XM_005384436 XP_005384493 MODEL 8957681 protein-coding Ddx25 DEAD-box helicase 25 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); regulation of translation (ortholog); spermatid development (ortholog); ASSOCIATED WITH azoospermia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 26952655 26973758 + 102027281 AGCD01013224;AGCD01013225;GBDF01007483;XM_005378483;XR_260027 XP_005378540 MODEL 8714452 protein-coding Faap100 FA core complex associated protein 100 ASSOCIATED WITH acute myeloid leukemia (ortholog); Fanconi anemia complementation group X (ortholog); melanoma (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) NW_004955506 1515908 1525660 + 102004187 AGCD01065269;GBDK01145858;XM_005407273;XR_264322 XP_005407330 MODEL 8808908 ncrna LOC102005351 uncharacterized LOC102005351 NW_004955466 1620912 1640471 + 102005351 AGCD01050714;GBDI01342166;XR_001236819;XR_001236820;XR_263277 MODEL 8961220 protein-coding Rab43 RAB43, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955429 13474460 13506979 - 102010504 AGCD01028750;AGCD01028751;AGCD01028752;GBBH01114788;GBCE01117554;XM_005386994 XP_005387051 MODEL 8929914 protein-coding Cpne3 copine 3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to growth factor stimulus (ortholog); ERBB2 signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN anchoring junction (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955417 4115298 4146878 + 102007338 AGCD01017938;AGCD01017939;GBBH01140987;GBCQ01094625;XM_013512811 XP_013368265 MODEL 8795966 protein-coding LOC102029986 olfactory receptor 8S1-like NW_004955500 7435876 7437241 - 102029986 AGCD01063923;XM_005406650 XP_005406707 MODEL 8962718 protein-coding Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH esophageal cancer (ortholog); generalized dystonia (ortholog); Joubert Syndrome 36 (ortholog); FOUND IN cytoplasm (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) NW_004955495 5829976 5836785 + 102014375 AGCD01062035;GBCQ01002760;XM_005405905 XP_005405962 MODEL 39133382 snrna U4 U4 spliceosomal RNA 9035732 ncrna LOC102024238 uncharacterized LOC102024238 NW_004955420 25457014 25461027 - 102024238 AGCD01021358;AGCD01021359;GBDF01226054;XR_260755 MODEL 39132180 rrna 5S_rRNA 5S ribosomal RNA 8984680 protein-coding Frmpd2 FERM and PDZ domain containing 2 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955556 1732140 1847956 + 102013348 AGCD01073201;AGCD01073202;AGCD01073203;AGCD01073204;GBBH01187300;XM_013508799;XM_013508801;XM_013508802;XM_013508803;XM_013508804;XM_013508805;XM_013508806;XM_013508807;XM_013508808;XM_013508809 XP_013364253;XP_013364255;XP_013364256;XP_013364257;XP_013364258;XP_013364259;XP_013364260;XP_013364261;XP_013364262;XP_013364263 MODEL 39133858 misc_rna 7SK 7SK RNA 9012389 ncrna LOC102006794 uncharacterized LOC102006794 NW_004955426 2684376 2772914 - 102006794 AGCD01026053;AGCD01026054;XR_261179 MODEL 8741908 protein-coding Tas2r60 taste 2 receptor member 60 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN membrane (ortholog) NW_004955494 220847 221851 - 102024923 AGCD01061370;XM_005405523 XP_005405580 MODEL 8953192 protein-coding Arrdc4 arrestin domain containing 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN extracellular vesicle biogenesis (ortholog); positive regulation of interferon-beta production (ortholog); protein K63-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955416 25573265 25583928 + 102027407 AGCD01017590;GBCE01069752;GBDF01049169;XM_005381612 XP_005381669 MODEL 10322399 protein-coding LOC106147522 uncharacterized LOC106147522 NW_004955574 66400 68449 + 106147522 AGCD01075083;XM_013509503 XP_013364957 MODEL 9009826 protein-coding Ccng2 cyclin G2 INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colon cancer (ortholog) NW_004955433 1799405 1807050 + 102016188 AGCD01031371;GBDF01154081;GBDF01154083;XM_013516284 XP_013371738 MODEL 8902760 pseudo LOC102003569 40S ribosomal protein S20 pseudogene NW_004955429 19247140 19249410 + 102003569 AGCD01028938 MODEL 8861464 protein-coding Dhx37 DEAH-box helicase 37 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); U3 snoRNA binding (ortholog); INVOLVED IN brain development (ortholog); positive regulation of male gonad development (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH 46,XY sex reversal 11 (ortholog); acute myeloid leukemia (ortholog); amenorrhea (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleolus (ortholog) NW_004955482 4733720 4754754 + 102008853 AGCD01057307;AGCD01057308;GBCE01154824;XM_005403001 XP_005403058 MODEL 8960397 ncrna LOC102006426 uncharacterized LOC102006426 NW_004955409 9876860 10068894 - 102006426 AGCD01009449;AGCD01009450;AGCD01009451;AGCD01009452;AGCD01009453;AGCD01009454;AGCD01009455;AGCD01009456;GBDF01306880;XR_001232611;XR_001232612;XR_001232613 MODEL 9010445 protein-coding Tlr5 toll like receptor 5 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to mechanical stimulus (ortholog); male gonad development (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); alcohol use disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955520 1544840 1562081 + 102013533 AGCD01068058;GBDI01310659;XM_013507068;XM_013507069;XM_013507070;XM_013507071;XM_013507073;XM_013507074;XR_001231877;XR_001231878;XR_001231879;XR_001231880 XP_013362522;XP_013362523;XP_013362524;XP_013362525;XP_013362527;XP_013362528 MODEL 8728093 pseudo LOC102003912 S-phase kinase-associated protein 1 pseudogene NW_004955442 6806797 6817973 + 102003912 AGCD01037597;AGCD01037598;AGCD01037599 MODEL 8865535 protein-coding LOC102007955 olfactory receptor 2H1-like NW_004955583 61165 64037 + 102007955 AGCD01075793;GBDK01227600;XM_005414286 XP_005414343 MODEL 8809822 pseudo LOC102010670 ADP-ribosylation factor-like protein 8B pseudogene NW_004955455 5770199 5771659 - 102010670 AGCD01045751 MODEL 8985655 protein-coding Pomp proteasome maturation protein INVOLVED IN proteasome assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); epilepsy (ortholog); exanthem (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955497 7978434 7996982 + 102017356 AGCD01062689;AGCD01062690;GBDF01005439;XM_013505497 XP_013360951 MODEL 8832308 protein-coding LOC102011445 translation initiation factor IF-2-like NW_004955418 844476 848795 + 102011445 AGCD01018691;GBDF01112395;XM_005382047 XP_005382104 MODEL 8721023 protein-coding LOC102009464 chromosome unknown open reading frame, human C5orf15 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955408 5245336 5256655 - 102009464 AGCD01008129;GBCQ01005179;XM_005376124;XM_005376125 XP_005376181;XP_005376182 MODEL 8914499 protein-coding Bend6 BEN domain containing 6 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955502 3123024 3152121 - 102027550 AGCD01064310;GBDF01305622;XM_005406887 XP_005406944 MODEL 9059166 protein-coding LOC102005354 T-cell surface glycoprotein YE1/48-like NW_004955413 7520787 7531148 + 102005354 AGCD01013822;GBDK01356301;XM_005378928 XP_005378985 MODEL 8989734 protein-coding Dytn dystrotelin ASSOCIATED WITH cervical cancer (ortholog); pancreatic adenocarcinoma (ortholog); thymoma (ortholog) NW_004955457 8269960 8332498 + 102027494 AGCD01046907;GBDF01273348;XM_013520662 XP_013376116 MODEL 39131619 rrna 5S_rRNA 5S ribosomal RNA 8964855 protein-coding Ppp2r2c protein phosphatase 2 regulatory subunit Bgamma ASSOCIATED WITH Breast Cancer, Familial (ortholog); Emphysema (ortholog); esophageal cancer (ortholog) NW_004955514 3863461 3893026 + 102009975 AGCD01067119;GBDF01253553;XM_005408859 XP_005408916 MODEL 8809497 protein-coding LOC102025359 C-C motif chemokine 3 NW_004955481 10400276 10402146 - 102025359 AGCD01057146;GBDK01021644;XM_005402905 XP_005402962 MODEL 10186614 protein-coding LOC106148612 uncharacterized LOC106148612 NW_004955403 16772397 16806400 + 106148612 AGCD01002067;GBDF01109803;XM_013514754 XP_013370208 MODEL 8911021 protein-coding Ptrh1 peptidyl-tRNA hydrolase 1 homolog ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955419 940508 942375 + 102028195 AGCD01019624;GBDI01009713;XM_005382417 XP_005382474 MODEL 730469533 snorna SNORD91 Small nucleolar RNA SNORD91 family 8992638 ncrna LOC102018860 uncharacterized LOC102018860 NW_004955439 13825758 13882758 + 102018860 AGCD01035968;GBDF01154382;XR_001235173 MODEL 8748440 pseudo LOC102022200 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN pseudogene NW_004955498 2454830 2456075 - 102022200 AGCD01062795;XM_005406400 MODEL 8730640 protein-coding LOC102005698 olfactory receptor 51I1-like NW_004955414 21369682 21370626 - 102005698 AGCD01015417;XM_005380087 XP_005380144 MODEL 8999415 protein-coding Endod1 endonuclease domain containing 1 INVOLVED IN DNA repair (ortholog); double-strand break repair (ortholog); homologous recombination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955412 61280 65352 + 102009816 AGCD01012480;GBDJ01177795;XM_013511207 XP_013366661 MODEL 8768286 protein-coding Eif1ax eukaryotic translation initiation factor 1A X-linked INVOLVED IN ribosome assembly (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH diffuse midline glioma, H3 K27-altered (ortholog); disease of cellular proliferation (ortholog); hepatocellular carcinoma (ortholog); FOUND IN eukaryotic 43S preinitiation complex (ortholog); eukaryotic 48S preinitiation complex (ortholog); multi-eIF complex (ortholog) NW_004955509 577975 594028 - 102006801 AGCD01065937;GBBH01065130;XM_005407808 XP_005407865 MODEL 8838056 protein-coding Slc25a34 solute carrier family 25 member 34 INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955527 2433577 2437348 - 102009872 AGCD01069436;GBDI01262999;XM_005409861;XM_005409862 XP_005409918;XP_005409919 MODEL 9020185 protein-coding Six6 SIX homeobox 6 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Isolated Microphthalmia with Cataract 2 (ortholog); myopia (ortholog); optic disc anomalies with retinal and/or macular dystrophy (ortholog) NW_004955466 9120227 9122109 - 102020896 AGCD01051028;XM_013521887 XP_013377341 MODEL 9045150 protein-coding Cpne4 copine 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) NW_004955501 6473669 6941617 + 102008125 AGCD01064194;AGCD01064195;AGCD01064196;AGCD01064197;AGCD01064198;AGCD01064199;AGCD01064200;AGCD01064201;AGCD01064202;GBCQ01032387;XM_005406839;XM_013505812 XP_005406896;XP_013361266 MODEL 9042278 protein-coding Yaf2 YY1 associated factor 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955500 1531884 1626335 - 102029985 AGCD01063657;AGCD01063658;AGCD01063659;AGCD01063660;AGCD01063661;AGCD01063662;AGCD01063663;AGCD01063664;AGCD01063665;AGCD01063666;AGCD01063667;GBBH01107030;XM_005406575;XR_001231508;XR_001231509;XR_001231510;XR_001231511 XP_005406632 MODEL 8878731 protein-coding LOC102010672 uncharacterized LOC102010672 NW_004955456 8615945 8618802 + 102010672 AGCD01046495;AGCD01046496;GBDJ01224884;XM_013520516 XP_013375970 MODEL 8864349 protein-coding Rhpn2 rhophilin Rho GTPase binding protein 2 INVOLVED IN glomerular filtration (ortholog); negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 4932437 4976584 + 102022907 AGCD01051930;GBCQ01096955;GBDF01303848;XM_013522388 XP_013377842 MODEL 8716887 protein-coding Lsm8 LSM8 homolog, U6 small nuclear RNA associated INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lymphoma (ortholog); FOUND IN Lsm2-8 complex (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955432 23818036 23823550 + 102017691 AGCD01031298;GBCE01029815;XM_005388137 XP_005388194 MODEL 730469455 snorna SNORA7 Small nucleolar RNA SNORA7 39133859 misc_rna 7SK 7SK RNA 39131366 protein-coding DYTN dystrotelin 8701229 protein-coding Capn7 calpain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); MIT domain binding (ortholog); INVOLVED IN positive regulation of epithelial cell migration (ortholog); proteolysis (ortholog); self proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955430 2269274 2307801 - 102014700 AGCD01029162;GBBH01149851;GBDF01192466;XM_005387313 XP_005387370 MODEL 8885455 protein-coding CUNH17orf100 chromosome unknown C17orf100 homolog NW_004955467 12155309 12158762 + 102007101 AGCD01051625;GBDF01156145;XM_005399667;XM_005399668 XP_005399724;XP_005399725 MODEL 8900453 pseudo LOC102026071 glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial pseudogene NW_004955405 29962101 29963733 - 102026071 AGCD01005263 MODEL 9027065 protein-coding Faap20 FA core complex associated protein 20 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin-modified protein reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); interstrand cross-link repair (ortholog); translesion synthesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955486 8938352 8944631 + 102026872 AGCD01059157;AGCD01059158;GBDK01196994;XM_013504145 XP_013359599 MODEL 8913986 protein-coding Ddx27 DEAD-box helicase 27 INVOLVED IN rRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955445 8881062 8899895 - 102006506 AGCD01039617;AGCD01039618;GBDJ01176930;XM_005392332 XP_005392389 MODEL 8751346 protein-coding Cib1 calcium and integrin binding 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); Epidermodysplasia Verruciformis 3 (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); centrosome (ortholog) NW_004955416 15102632 15106372 + 102022284 AGCD01017300;AGCD01017301;GBDI01005717;XM_005381532 XP_005381589 MODEL 8993790 protein-coding Rab44 RAB44, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN histamine secretion by mast cell (ortholog); histamine secretion mediated by IgE immunoglobulin (ortholog); mast cell degranulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); familial meningioma (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955437 6223281 6250068 - 102025839 AGCD01034422;AGCD01034423;AGCD01034424;GBBH01203108;XM_005389639;XM_005389640;XM_005389641;XM_005389642;XM_005389643;XM_005389644;XM_005389645;XM_013517131;XM_013517132 XP_005389696;XP_005389697;XP_005389698;XP_005389699;XP_005389700;XP_005389701;XP_005389702;XP_013372585;XP_013372586 MODEL 8938008 ncrna LOC102029989 uncharacterized LOC102029989 NW_004955429 23444217 23448375 + 102029989 AGCD01029067;GBDJ01151665;XR_261395 MODEL 39133383 snrna U4 U4 spliceosomal RNA 8705945 protein-coding LOC102012698 zinc finger protein 709-like NW_004955569 603589 617354 + 102012698 AGCD01074601;AGCD01074602;XM_013509369 XP_013364823 MODEL 39132182 rrna 5S_rRNA 5S ribosomal RNA 8866963 protein-coding Tlr6 toll like receptor 6 ENCODES a protein that exhibits diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); lipopeptide binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to amyloid-beta (ortholog); cellular response to diacyl bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); aspergillosis (ortholog); asthma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955443 8401461 8427175 + 102003592 AGCD01038323;AGCD01038324;AGCD01038325;AGCD01038326;GBDF01165081;XM_005391993;XM_005391995;XM_013518056;XM_013518057;XM_013518058;XM_013518059 XP_005392050;XP_005392052;XP_013373510;XP_013373511;XP_013373512;XP_013373513 MODEL 8742517 protein-coding LOC102024243 olfactory receptor 2F1-like NW_004955491 318142 319272 + 102024243 AGCD01060329;GBDF01212144;XM_005404880 XP_005404937 MODEL 39134411 misc_rna 7SK 7SK RNA 8940088 protein-coding Irag1 inositol 1,4,5-triphosphate receptor associated 1 INVOLVED IN negative regulation of smooth muscle contraction (ortholog); phosphatidylinositol-mediated signaling (ortholog); relaxation of vascular associated smooth muscle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog) NW_004955414 26185226 26297647 - 102008212 AGCD01015640;GBBH01203093;XM_013511906;XM_013511907;XM_013511908;XM_013511909;XM_013511910 XP_013367360;XP_013367361;XP_013367362;XP_013367363;XP_013367364 MODEL 9035295 pseudo LOC102011448 60S ribosomal protein L5-like NW_004955419 28970094 28970946 - 102011448 AGCD01020481 MODEL 9007453 protein-coding Frmpd3 FERM and PDZ domain containing 3 NW_004955490 8330703 8369075 - 102027990 AGCD01060280;AGCD01060281;AGCD01060282;GBDI01208884;XM_013504519 XP_013359973 MODEL 8895412 protein-coding Bend7 BEN domain containing 7 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog) NW_004955429 20674390 20756760 + 102010079 AGCD01028988;AGCD01028989;AGCD01028990;GBCE01135033;GBDK01082325;XM_005387164 XP_005387221 MODEL 8984391 ncrna LOC102005357 uncharacterized LOC102005357 NW_004955413 23947369 23962983 + 102005357 AGCD01014341;AGCD01014342;AGCD01014343;GBCQ01160344;XR_260102 MODEL 8997987 ncrna LOC102010678 uncharacterized LOC102010678 NW_004955410 29688647 29706211 + 102010678 AGCD01011293;GBDF01277999;XR_259884 MODEL 8711878 pseudo LOC102006795 nuclear receptor subfamily 5 group A member 2 pseudogene NW_004955503 337968 338545 + 102006795 AGCD01064497 MODEL 10128233 ncrna LOC106147523 uncharacterized LOC106147523 NW_004955574 1203934 1206178 + 106147523 AGCD01075164;GBBH01114482;XR_001232448 MODEL 9019517 protein-coding Rasip1 Ras interacting protein 1 ENCODES a protein that exhibits GTPase binding (ortholog); protein homodimerization activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); negative regulation of membrane permeability (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell-cell junction (ortholog); protein-containing complex (ortholog) NW_004955559 1830574 1844107 + 102020728 AGCD01073672;AGCD01073673;AGCD01073674;AGCD01073675;GBBH01005709;GBDF01267130;XM_013508989 XP_013364443 MODEL 10204498 ncrna LOC106148613 uncharacterized LOC106148613 NW_004955425 636414 644851 + 106148613 AGCD01025190;GBDI01088772;XR_001234253;XR_001234254 MODEL 730469385 snorna SNORD91 Small nucleolar RNA SNORD91 family 8771462 protein-coding Tasl TLR adaptor interacting with endolysosomal SLC15A4 INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of toll-like receptor 7 signaling pathway (ortholog); positive regulation of toll-like receptor 8 signaling pathway (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endolysosome membrane (ortholog) NW_004955531 207614 293127 + 102017498 AGCD01069977;AGCD01069978;AGCD01069979;AGCD01069980;AGCD01069981;AGCD01069982;AGCD01069983;AGCD01069984;AGCD01069985;AGCD01069986;AGCD01069987;GBCQ01146366;XM_005410129;XM_013507559 XP_005410186;XP_013363013 MODEL 9059206 protein-coding Ccnh cyclin H ENCODES a protein that exhibits kinase activity (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN protein stabilization (ortholog); regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); nucleoplasm (ortholog) NW_004955418 23790398 23807509 + 102007432 AGCD01019313;GBDK01144676;XM_005382297 XP_005382354 MODEL 8706093 ncrna LOC102018861 uncharacterized LOC102018861 NW_004955547 1458211 1476533 - 102018861 AGCD01072224;AGCD01072225;GBDJ01374207;XR_001232216 MODEL 9028449 protein-coding Tstd2 thiosulfate sulfurtransferase like domain containing 2 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955419 27820265 27841210 + 102023477 AGCD01020448;GBDJ01031238;XM_005382843;XM_005382844;XM_005382845;XM_005382847;XM_005382848 XP_005382900;XP_005382901;XP_005382902;XP_005382904;XP_005382905 MODEL 8814870 protein-coding LOC102005700 uncharacterized LOC102005700 NW_004955470 11975332 11978904 - 102005700 AGCD01052916;GBCQ01088386;XM_013522705 XP_013378159 MODEL 9013243 pseudo LOC102007959 fatty acyl-CoA reductase 1-like NW_004955402 53525237 53526901 - 102007959 AGCD01001369 MODEL 8774162 protein-coding Endog endonuclease G ENCODES a protein that exhibits DNA endonuclease activity (ortholog); DNA nuclease activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog); perikaryon (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955570 1200461 1203566 + 102025406 AGCD01074798;AGCD01074799;GBBH01228917;XM_005413641 XP_005413698 MODEL 8846477 protein-coding Eif1b eukaryotic translation initiation factor 1B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955420 29514067 29515362 - 102013617 AGCD01021508;GBDF01155369;GBDJ01141903;XM_005383580 XP_005383637 MODEL 8979477 protein-coding Pomt1 protein O-mannosyltransferase 1 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); mannosyltransferase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of protein O-linked glycosylation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN acrosomal vesicle (ortholog); dolichyl-phosphate-mannose-protein mannosyltransferase complex (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955513 1189169 1203933 + 102021696 AGCD01066845;GBDF01007560;XM_005408363;XM_013506609;XM_013506610;XM_013506611;XM_013506612;XM_013506613 XP_005408420;XP_013362063;XP_013362064;XP_013362065;XP_013362066;XP_013362067 MODEL 39131620 rrna 5S_rRNA 5S ribosomal RNA 8816765 protein-coding Ska1 spindle and kinetochore associated complex subunit 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); kinetochore (ortholog); meiotic spindle (ortholog) NW_004955402 35382531 35395787 + 102018668 AGCD01000884;GBDF01306695;XM_005372927;XM_005372928 XP_005372984;XP_005372985 MODEL 8933051 protein-coding Arrdc5 arrestin domain containing 5 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN membrane (ortholog) NW_004955495 4161144 4166968 + 102030436 AGCD01061898;AGCD01061899;GBDF01000032;XM_005405775 XP_005405832 MODEL 8859908 ncrna LOC102003575 uncharacterized LOC102003575 NW_004955433 12281187 12287342 + 102003575 AGCD01031661;XR_001234717;XR_261586 MODEL 8970498 protein-coding Cpne5 copine 5 INVOLVED IN positive regulation of dendrite extension (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN neuron projection (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) NW_004955437 6153486 6218774 + 102025044 AGCD01034421;AGCD01034422;GBDF01117026;XM_005389636;XM_005389637;XM_005389638;XM_013517116 XP_005389693;XP_005389694;XP_005389695;XP_013372570 MODEL 8739733 protein-coding LOC102022201 melanoma-associated antigen 11-like NW_004955498 4031910 4032668 - 102022201 AGCD01062960;XM_005406480 XP_005406537 MODEL 8886432 pseudo LOC102010681 WD repeat domain phosphoinositide-interacting protein 2-like NW_004955411 4563483 4584420 + 102010681 AGCD01011581 MODEL 8844699 ncrna LOC102006427 uncharacterized LOC102006427 NW_004955459 3352170 3356325 - 102006427 AGCD01048013;XR_263014 MODEL 9021381 protein-coding Dhx38 DEAH-box helicase 38 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 4752834 4770843 + 102018097 AGCD01058232;GBDF01223379;XM_005403530 XP_005403587 MODEL 8813585 pseudo LOC102013114 transmembrane protein 54 pseudogene NW_004955435 7874595 7902075 - 102013114 AGCD01032980;AGCD01032981 MODEL 8735055 protein-coding Capn8 calpain 8 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); celiac disease (ortholog); lung cancer (ortholog) NW_004955520 1340038 1379765 + 102012235 AGCD01068051;AGCD01068052;AGCD01068053;GBCQ01188455;XM_005409235 XP_005409292 MODEL 8934368 ncrna LOC102026073 uncharacterized LOC102026073 NW_004955455 3432716 3456703 - 102026073 AGCD01045626;AGCD01045627;AGCD01045628;GBDF01086767;XR_262819;XR_262820 MODEL 8810723 protein-coding Slc25a35 solute carrier family 25 member 35 ENCODES a protein that exhibits phosphoenolpyruvate transmembrane transporter activity (ortholog); INVOLVED IN glycerol-3-phosphate biosynthetic process (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955467 8618572 8628857 + 102019789 AGCD01051463;GBDK01357239;XM_013522178;XM_013522179;XM_013522180;XM_013522181;XM_013522182 XP_013377632;XP_013377633;XP_013377634;XP_013377635;XP_013377636 MODEL 8780711 protein-coding Cib2 calcium and integrin binding family member 2 ENCODES a protein that exhibits calcium ion binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to ATP (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 48 (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cuticular plate (ortholog); cytoplasm (ortholog); muscle tendon junction (ortholog) NW_004955450 660655 674726 - 102006730 AGCD01042341;GBCE01008843;XM_005393438;XM_013518896;XM_013518897 XP_005393495;XP_013374350;XP_013374351 MODEL 8729841 protein-coding Ppp2r2d protein phosphatase 2 regulatory subunit Bdelta ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN regulation of chromosome segregation (ortholog); FOUND IN cytoplasm (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955477 9571974 9611076 + 102022283 AGCD01055677;GBDF01108912;XM_005402033;XM_005402034 XP_005402090;XP_005402091 MODEL 8930427 protein-coding Sars2 seryl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH cataract (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955468 603778 613475 + 102003009 AGCD01051719;GBCQ01127049;XM_005399804 XP_005399861 MODEL 8775847 protein-coding Lsmem1 leucine rich single-pass membrane protein 1 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); thymoma (ortholog); FOUND IN cytosol (ortholog) NW_004955410 16224294 16235975 + 102016139 AGCD01010951;GBDI01258132;XM_005377321 XP_005377378 MODEL 8778454 protein-coding Ribc1 RIB43A domain with coiled-coils 1 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) NW_004955475 468435 486441 + 102015509 AGCD01054692;GBCE01170361;XM_005401496;XM_005401497;XM_005401498;XM_005401499;XM_005401502 XP_005401553;XP_005401554;XP_005401555;XP_005401556;XP_005401559 MODEL 8796179 protein-coding Ptrh2 peptidyl-tRNA hydrolase 2 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); INVOLVED IN negative regulation of anoikis (ortholog); negative regulation of gene expression (ortholog); positive regulation of anoikis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); Infantile-Onset Multisystem Neurologic, Endocrine, and Pancreatic Disease (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955451 3370761 3375979 + 102013236 AGCD01043053;GBDF01192078;XM_005393981 XP_005394038 MODEL 8840724 protein-coding Yap1 Yes1 associated transcriptional regulator ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN bud elongation involved in lung branching (ortholog); cardiac muscle tissue regeneration (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 5423866 5533728 + 102010882 AGCD01012633;AGCD01012634;GBBH01090880;GBDF01046541;XM_013511126 XP_013366580 MODEL 39133860 misc_rna 7SK 7SK RNA 8982150 protein-coding Tlr7 toll like receptor 7 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); pattern recognition receptor activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to virus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute Otitis Media (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); early phagosome (ortholog); endoplasmic reticulum (ortholog) NW_004955544 424897 443562 - 102029665 AGCD01071705;GBDJ01403647;XM_005411374 XP_005411431 MODEL 8798140 pseudo LOC102003915 SAFB-like transcription modulator NW_004955445 12049621 12053924 - 102003915 AGCD01039731 MODEL 8931485 protein-coding Best1 bestrophin 1 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN chloride transport (ortholog); detection of light stimulus involved in visual perception (ortholog); gamma-aminobutyric acid secretion, neurotransmission (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant vitreoretinochoroidopathy (ortholog); bestrophinopathy (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); chloride channel complex (ortholog) NW_004955511 5773025 5783800 - 102007797 AGCD01066581;GBDF01053629;XM_005408133;XM_005408134;XM_013506425;XM_013506426;XR_001231698 XP_005408190;XP_005408191;XP_013361879;XP_013361880 MODEL 8832127 ncrna LOC102006796 uncharacterized LOC102006796 NW_004955427 4093452 4098801 + 102006796 AGCD01026959;GBDF01145084;XR_261228 MODEL 10290909 protein-coding LOC106147524 translation initiation factor IF-2-like NW_004955574 1493269 1495032 + 106147524 AGCD01075183;GBDK01151612;XM_013509547 XP_013365001 MODEL 8955221 pseudo LOC102009469 non-POU domain-containing octamer-binding protein pseudogene NW_004955458 11867254 11868199 - 102009469 AGCD01047762 MODEL 8780777 protein-coding Ddx28 DEAD-box helicase 28 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955484 8609895 8612309 + 102010698 AGCD01058393;GBDF01192146;XM_005403587 XP_005403644 MODEL 8942822 pseudo LOC102029991 deoxynucleotidyltransferase terminal-interacting protein 2-like NW_004955433 13429572 13432379 + 102029991 AGCD01031690 MODEL 8937722 pseudo LOC102018872 ELAV-like protein 1 pseudogene NW_004955574 1566040 1566941 - 102018872 AGCD01075190 MODEL 8708823 pseudo LOC102025361 coiled-coil domain-containing protein 152 pseudogene NW_004955418 6274363 6275849 + 102025361 AGCD01018870;AGCD01018871 MODEL 39133385 snrna U4 U4 spliceosomal RNA 8938102 pseudo LOC102007960 ubiquitin-conjugating enzyme E2 L3 pseudogene NW_004955403 1242593 1242983 + 102007960 AGCD01001717 MODEL 8912011 pseudo LOC102012703 transmembrane protease serine 11E-like NW_004955447 5103263 5144409 + 102012703 AGCD01040741;AGCD01040742;AGCD01040743 MODEL 8941779 protein-coding Rab4a RAB4A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); neurotransmitter receptor transport postsynaptic membrane to endosome (ortholog); protein transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); endosome (ortholog) NW_004955492 8715252 8743432 - 102018840 AGCD01060825;GBDF01087629;GBDJ01234437;XM_005405009 XP_005405066 MODEL 39134412 misc_rna 7SK 7SK RNA 39131534 protein-coding IRAG2 inositol 1,4,5-triphosphate receptor associated 2 8817542 protein-coding Eif2a eukaryotic translation initiation factor 2A ENCODES a protein that exhibits ribosome binding (ortholog); translation initiation factor activity (ortholog); tRNA binding (ortholog); INVOLVED IN positive regulation of signal transduction (ortholog); regulation of translation (ortholog); response to amino acid starvation (ortholog); PARTICIPATES IN ceramide signaling pathway; endoplasmic reticulum stress - the unfolded protein response pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH borna disease (ortholog); dystonia 33 (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog) NW_004955448 1743060 1781401 + 102025064 AGCD01041267;GBDF01156554;XM_005393010 XP_005393067 MODEL 39132573 snorna SNORA70 Small nucleolar RNA SNORA70 39131328 protein-coding FRMPD3 FERM and PDZ domain containing 3 8901025 protein-coding Ddx31 DEAD-box helicase 31 INVOLVED IN ribosome biogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955513 1970386 2036572 - 102022842 AGCD01066867;GBDF01157939;GBDK01357545;XM_005408640 XP_005408697 MODEL 8887193 protein-coding Dzank1 double zinc ribbon and ankyrin repeat domains 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955415 26969814 27021767 - 102017120 AGCD01016621;GBDJ01297692;XM_013512227;XM_013512228;XM_013512229 XP_013367681;XP_013367682;XP_013367683 MODEL 8925140 protein-coding CUNH17orf107 chromosome unknown C17orf107 homolog ASSOCIATED WITH congenital myasthenic syndrome (ortholog) NW_004955467 10313693 10314724 + 102020788 AGCD01051558;GBDF01005267;XM_005399618 XP_005399675 MODEL 8968574 protein-coding LOC102003578 telomerase protein component 1-like NW_004955433 39594 81672 + 102003578 AGCD01031301;XM_013516101 XP_013371555 MODEL 616940629 snorna SNORD93 Small nucleolar RNA SNORD93 9015579 pseudo LOC102006428 transketolase pseudogene NW_004955459 3131676 3133894 + 102006428 AGCD01048009 MODEL 8757861 protein-coding Tstd3 thiosulfate sulfurtransferase like domain containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); stomach cancer (ortholog) NW_004955411 25392449 25403237 + 102025555 AGCD01012155;GBCE01181628;GBDI01024644;XM_005377810 XP_005377867 MODEL 39132185 rrna 5S_rRNA 5S ribosomal RNA 9027589 protein-coding Tlr8 toll like receptor 8 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); defense response to virus (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic rhinitis (ortholog); anogenital venereal wart (ortholog); FOUND IN endosome membrane (ortholog); external side of plasma membrane (ortholog) NW_004955544 302027 317110 - 102028898 AGCD01071699;GBDK01322932;XM_005411372;XM_005411373 XP_005411429;XP_005411430 MODEL 8883865 pseudo LOC102011451 uncharacterized LOC102011451 NW_004955421 28537400 28548971 - 102011451 AGCD01022331 MODEL 8951786 protein-coding Dzip1 DAZ interacting zinc finger protein 1 ENCODES a protein that exhibits BBSome binding (ortholog); molecular adaptor activity (ortholog); protein sequestering activity (ortholog); INVOLVED IN ciliary basal body organization (ortholog); cilium assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant intellectual developmental disorder 61 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955404 14428026 14481106 + 102023426 AGCD01003509;GBCE01127362;XM_005374099 XP_005374156 MODEL 8929571 protein-coding Endou endonuclease, poly(U) specific ENCODES a protein that exhibits RNA binding (ortholog); RNA endonuclease activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN female pregnancy (ortholog); negative regulation of lipid catabolic process (ortholog); post-transcriptional gene silencing (ortholog); FOUND IN cytoplasm (ortholog) NW_004955500 6631749 6653457 - 102017475 AGCD01063888;AGCD01063889;GBDI01340378;XM_005406609;XM_013505657;XM_013505658;XM_013505660 XP_005406666;XP_013361111;XP_013361112;XP_013361114 MODEL 8753509 protein-coding Pomt2 protein O-mannosyltransferase 2 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); mannosyltransferase activity (ortholog); INVOLVED IN basement membrane organization (ortholog); dentate gyrus development (ortholog); positive regulation of protein O-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN dolichyl-phosphate-mannose-protein mannosyltransferase complex (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955438 1179064 1218860 - 102013869 AGCD01034976;GBDI01292675;XM_005390192;XM_005390193;XM_005390194 XP_005390249;XP_005390250;XP_005390251 MODEL 10317829 protein-coding Ska2 spindle and kinetochore associated complex subunit 2 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN kinetochore (ortholog); meiotic spindle (ortholog); outer kinetochore (ortholog) NW_004955451 3839978 3862200 + 106149657 AGCD01043075;AGCD01043076;AGCD01043077;GBDF01087363;XM_013519227 XP_013374681 MODEL 9062865 protein-coding Ribc2 RIB43A domain with coiled-coils 2 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955413 29765119 29781206 + 102004155 AGCD01014594;GBCE01075814;XM_005379489 XP_005379546 MODEL 10161932 ncrna LOC106148615 uncharacterized LOC106148615 NW_004955425 27171461 27181335 + 106148615 AGCD01025965;GBCE01044095;XR_001234255 MODEL 8886702 protein-coding Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of cytotoxic T cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); Golgi apparatus (ortholog) NW_004955422 19360641 19370623 - 102022394 AGCD01023002;GBCE01006992;XM_005384438 XP_005384495 MODEL 8899037 protein-coding Arsa arylsulfatase A ENCODES a protein that exhibits arylsulfatase activity (ortholog); calcium ion binding (ortholog); cerebroside-sulfatase activity (ortholog); INVOLVED IN autophagy (ortholog); binding of sperm to zona pellucida (ortholog); ganglioside catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH apraxia (ortholog); Ataxia (ortholog); Autosomal Sideroblastic Anemia (ortholog); FOUND IN acrosomal vesicle (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) NW_004955413 33624460 33629491 - 102008522 AGCD01014683;GBDK01093821;XM_005379595;XM_005379596;XM_013511654 XP_005379652;XP_005379653;XP_013367108 MODEL 8775547 protein-coding Rasl10a RAS like family 10 member A NW_004955455 3618656 3621299 - 102005224 AGCD01045640;AGCD01045641;GBDF01268764;XM_005396200 XP_005396257 MODEL 8900184 protein-coding Ccni cyclin I ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear membrane (ortholog) NW_004955433 1698568 1735196 - 102015339 AGCD01031366;GBCB01005241;GBCE01000586;XM_005388188 XP_005388245 MODEL 9008835 protein-coding Cpne6 copine 6 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of dendrite extension (ortholog); postsynaptic actin cytoskeleton organization (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); FOUND IN axon (ortholog); clathrin-coated endocytic vesicle (ortholog); cytoplasm (ortholog) NW_004955409 36315353 36322646 - 102014425 AGCD01010456;XM_005377055;XM_013510257 XP_005377112;XP_013365711 MODEL 8752232 ncrna LOC102005701 uncharacterized LOC102005701 NW_004955471 8033027 8043382 + 102005701 AGCD01053175;GBDF01122898;XR_263529 MODEL 8815560 protein-coding Tasor transcription activation suppressor ENCODES a protein that exhibits chromatin binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN anterior/posterior axis specification, embryo (ortholog); constitutive heterochromatin formation (ortholog); mesodermal to mesenchymal transition involved in gastrulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN chromosome (ortholog); heterochromatin (ortholog); HUSH complex (ortholog) NW_004955430 6440655 6480956 - 102004306 AGCD01029292;AGCD01029293;AGCD01029294;AGCD01029295;AGCD01029296;GBBH01227717;GBDI01138171;XM_013515613;XM_013515614 XP_013371067;XP_013371068 MODEL 8828118 protein-coding LOC102010684 C-type lectin domain family 2 member F-like NW_004955413 7860820 7873954 + 102010684 AGCD01013834;GBDF01050906;XM_005378944 XP_005379001 MODEL 9017316 ncrna LOC102024251 uncharacterized LOC102024251 NW_004955423 17070325 17072112 - 102024251 AGCD01023845;GBDF01112738;XR_001234037;XR_260979 MODEL 8850806 protein-coding LOC102013115 vomeronasal type-2 receptor 116-like NW_004955524 3532203 3543838 - 102013115 AGCD01068906;XM_013507197 XP_013362651 MODEL 8735962 pseudo LOC102026074 histone-lysine N-methyltransferase SUV39H2 pseudogene NW_004955406 24704624 24705263 - 102026074 AGCD01006206 MODEL 8995472 protein-coding Slc25a36 solute carrier family 25 member 36 ENCODES a protein that exhibits pyrimidine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN pyrimidine nucleotide import into mitochondrion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955508 4699668 4721198 - 102030104 AGCD01065885;GBCQ01035640;GBDI01008293;XM_013506278 XP_013361732 MODEL 9020570 protein-coding LOC102005359 olfactory receptor 10J1-like NW_004955468 11069935 11070873 - 102005359 AGCD01052113;XM_005400167 XP_005400224 MODEL 8867389 ncrna LOC102018873 uncharacterized LOC102018873 NW_004955402 23899043 23959834 + 102018873 AGCD01000634;GBDF01014734;XR_259065 MODEL 39133386 snrna U4 U4 spliceosomal RNA 8738250 protein-coding Lsmem2 leucine rich single-pass membrane protein 2 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955532 2096231 2101541 + 102029116 AGCD01070216;GBDK01198044;XM_005410256 XP_005410313 MODEL 8763963 protein-coding Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN eye photoreceptor cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN protein phosphatase type 2A complex (ortholog) NW_004955501 2648017 2751999 - 102018949 AGCD01064091;GBDJ01199144;XM_005406782;XM_005406783;XM_013505755;XM_013505757 XP_005406839;XP_005406840;XP_013361209;XP_013361211 MODEL 9007798 pseudo LOC102011459 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955424 20453388 20454636 + 102011459 AGCD01024856 MODEL 8924774 protein-coding Faap24 FA core complex associated protein 24 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955468 4977024 4980543 - 102026737 AGCD01051930;GBDF01193379;XM_005400075;XM_005400076;XM_005400077 XP_005400132;XP_005400133;XP_005400134 MODEL 8984107 pseudo LOC102022202 probable N-acetyltransferase CML1 NW_004955424 11918874 11919517 - 102022202 AGCD01024579 MODEL 9000084 protein-coding Irak1 interleukin 1 receptor associated kinase 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); identical protein binding (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to heat (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); asthma (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955580 663651 668622 - 102009440 AGCD01075618;GBBH01032142;GBCB01007238;XM_013509690 XP_013365144 MODEL 8862413 protein-coding Ddx39a DExD-box helicase 39A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of innate immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955415 33021976 33030479 - 102015629 AGCD01016746;GBCE01054769;XM_005381099;XM_005381100;XM_005381101 XP_005381156;XP_005381157;XP_005381158 MODEL 8733087 protein-coding CUNH17orf67 chromosome unknown C17orf67 homolog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955451 6003689 6020435 + 102014102 AGCD01043195;AGCD01043196;AGCD01043197;GBCE01007112;XM_005394072 XP_005394129 MODEL 8914806 protein-coding Capn9 calpain 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955492 7809188 7845090 - 102011876 AGCD01060804;GBBH01138772;XM_005404988 XP_005405045 MODEL 39132060 snorna SNORD94 Small nucleolar RNA SNORD94 9032439 protein-coding Dhx40 DEAH-box helicase 40 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955451 3456993 3500310 - 102014728 AGCD01043054;AGCD01043055;AGCD01043056;GBDK01430829;XM_005393985 XP_005394042 MODEL 8970735 ncrna LOC102006799 uncharacterized LOC102006799 NW_004955428 1444762 1465444 - 102006799 AGCD01027611;AGCD01027612;GBDF01016339;XR_001234438;XR_001234439;XR_001234440;XR_261291 MODEL 9034501 ncrna LOC102009472 uncharacterized LOC102009472 NW_004955462 1145564 1150883 - 102009472 AGCD01049102;AGCD01049103;GBDF01041427;XR_263087 MODEL 39132186 rrna 5S_rRNA 5S ribosomal RNA 8803354 ncrna LOC102029993 uncharacterized LOC102029993 NW_004955435 15611755 15650162 - 102029993 AGCD01033276;AGCD01033277;AGCD01033278;XR_001234848;XR_261701 MODEL 39134413 misc_rna 7SK 7SK RNA 39132481 snorna SNORA70 Small nucleolar RNA SNORA70 8701375 protein-coding Tasor2 transcription activation suppressor family member 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of gene expression, epigenetic (ortholog); negative regulation of type I interferon production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955421 22381295 22448115 + 102025253 AGCD01022134;AGCD01022135;AGCD01022136;GBDF01085789;XM_005383842;XM_005383843;XM_005383844;XM_005383845;XM_005383846;XM_005383847;XM_013513662;XM_013513663;XM_013513664 XP_005383899;XP_005383900;XP_005383901;XP_005383902;XP_005383903;XP_005383904;XP_013369116;XP_013369117;XP_013369118 MODEL 8876545 ncrna LOC102012707 uncharacterized LOC102012707 NW_004955584 1044910 1047589 + 102012707 AGCD01075977;GBBH01222868;XR_001232516 MODEL 39131621 rrna 5S_rRNA 5S ribosomal RNA 8861227 pseudo LOC102025363 uracil-DNA glycosylase pseudogene NW_004955484 7703130 7704292 - 102025363 AGCD01058343;AGCD01058344 MODEL 8906226 protein-coding Rab4b RAB4B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN D-glucose import across plasma membrane (ortholog); early endosome to Golgi transport (ortholog); endosomal vesicle fusion (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN early endosome membrane (ortholog); insulin-responsive compartment (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955578 559029 568966 - 102004532 AGCD01075489;GBDI01109935;XM_005414016;XM_005414017;XM_005414018;XM_013509647;XR_001232465;XR_265084 XP_005414073;XP_005414074;XP_005414075;XP_013365101 MODEL 39133861 misc_rna 7SK 7SK RNA 8763433 pseudo LOC102003918 stress-induced-phosphoprotein 1-like NW_004955447 5714882 5718387 - 102003918 AGCD01040769 MODEL 8778957 protein-coding Frmpd4 FERM and PDZ domain containing 4 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN positive regulation of synapse structural plasticity (ortholog); postsynaptic actin cytoskeleton organization (ortholog); ASSOCIATED WITH asthma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955544 586991 1152195 - 102003489 AGCD01071709;AGCD01071710;AGCD01071711;AGCD01071712;AGCD01071713;AGCD01071714;AGCD01071715;AGCD01071716;AGCD01071717;AGCD01071718;GBDK01363705;XM_005411379;XM_013508190 XP_005411436;XP_013363644 MODEL 9040590 protein-coding Best2 bestrophin 2 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); intracellularly ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); chloride channel complex (ortholog); cilium (ortholog) NW_004955415 31846053 31851628 + 102020907 AGCD01016698;GBCC01018119;XM_005381024 XP_005381081 MODEL 10197300 protein-coding LOC106147525 glioma tumor suppressor candidate region gene 1 protein-like NW_004955574 1485401 1486445 + 106147525 AGCD01075182;GBDI01012221;GBDJ01272352;XM_013509548 XP_013365002 MODEL 8996263 ncrna LOC102003579 uncharacterized LOC102003579 NW_004955522 3869752 3871054 + 102003579 AGCD01068402;GBDI01286574;XR_264629 MODEL 8773399 protein-coding Lsp1 lymphocyte specific protein 1 INVOLVED IN cellular response to interleukin-7 (ortholog); chemotaxis (ortholog); defense response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog) NW_004955422 13664594 13697682 + 102030642 AGCD01022837;AGCD01022838;GBDJ01074693;XM_005384187;XM_013514167;XM_013514168;XM_013514169 XP_005384244;XP_013369621;XP_013369622;XP_013369623 MODEL 8820384 protein-coding LOC102011465 olfactory receptor 4D9-like NW_004955511 4030217 4031152 + 102011465 AGCD01066488;XM_005408064 XP_005408121 MODEL 8776955 ncrna LOC102006432 uncharacterized LOC102006432 NW_004955410 5331999 5347043 - 102006432 AGCD01010683;GBBH01023353;XR_001232771;XR_259820 MODEL 8937825 protein-coding LOC102024255 melanoma-associated antigen 8-like NW_004955498 3964985 3967659 - 102024255 AGCD01062955;GBDF01220827;XM_005406404 XP_005406461 MODEL 10167406 pseudo LOC102007961 Ig heavy chain V-III region 23-like NW_004955643 40217 40730 + 102007961 AGCD01077723 MODEL 9033826 protein-coding LOC102010688 olfactory receptor 52D1-like NW_004955414 21652761 21653761 + 102010688 AGCD01015425;XM_005380102 XP_005380159 MODEL 8972903 protein-coding Ttbk1 tau tubulin kinase 1 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of gene expression (ortholog); positive regulation of astrocyte activation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Childhood Schizophrenia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule associated complex (ortholog) NW_004955437 9161880 9195098 + 102005176 AGCD01034521;AGCD01034522;GBDF01162981;XM_005389756;XM_005389758;XM_013517133;XM_013517134;XM_013517135;XM_013517136 XP_005389813;XP_005389815;XP_013372587;XP_013372588;XP_013372589;XP_013372590 MODEL 8797137 protein-coding Endov endonuclease V ENCODES a protein that exhibits DNA binding (ortholog); DNA endonuclease activity, producing 5'-phosphomonoesters (ortholog); magnesium ion binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleolus (ortholog) NW_004955506 2483409 2495484 - 102023504 AGCD01065296;GBCE01094306;XM_013506016;XM_013506017 XP_013361470;XP_013361471 MODEL 9015170 protein-coding LOC102013116 chymotrypsin-like elastase family member 2A NW_004955527 2688070 2701711 - 102013116 AGCD01069463;GBDF01042987;XM_005409873 XP_005409930 MODEL 8994935 protein-coding Capns1 calpain small subunit 1 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN calpain complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955468 2446631 2454369 - 102009268 AGCD01051817;AGCD01051818;GBCB01005315;XM_013522335 XP_013377789 MODEL 8974430 protein-coding Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 ENCODES a protein that exhibits eukaryotic translation initiation factor 2alpha kinase activity (ortholog); heme binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); HRI-mediated signaling (ortholog); integrated stress response signaling (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955460 13723674 13754545 + 102024314 AGCD01048720;AGCD01048721;AGCD01048722;GBBH01142818;XM_005397898;XM_005397899 XP_005397955;XP_005397956 MODEL 10335251 protein-coding Tlr9 toll like receptor 9 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); pattern recognition receptor activity (ortholog); siRNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to chloroquine (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Achlorhydria (ortholog); acute kidney failure (ortholog); acute necrotizing pancreatitis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955532 3828645 3832699 - 106146245 AGCD01070299;GBBH01177352;XM_005410346;XM_013507652;XM_013507653 XP_005410403;XP_013363106;XP_013363107 MODEL 8808376 ncrna LOC102018876 uncharacterized LOC102018876 NW_004955451 369727 371246 - 102018876 AGCD01042932;GBDF01306894;XR_262565 MODEL 8773245 protein-coding Pon1 paraoxonase 1 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); aryldialkylphosphatase activity (ortholog); arylesterase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); cholesterol metabolic process (ortholog); lactone catabolic process (ortholog); PARTICIPATES IN clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; organophosphate response pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN extracellular region (ortholog); high-density lipoprotein particle (ortholog); spherical high-density lipoprotein particle (ortholog) NW_004955432 11893473 11923035 - 102016942 AGCD01030957;GBBH01000456;XM_005388060;XM_005388062 XP_005388117;XP_005388119 MODEL 8810315 protein-coding Yars1 tyrosyl-tRNA synthetase 1 ENCODES a protein that exhibits small molecule binding (ortholog); tyrosine-tRNA ligase activity (ortholog); INVOLVED IN response to starvation (ortholog); tyrosyl-tRNA aminoacylation (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH acute kidney failure (ortholog); anemia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955452 11046047 11078016 - 102029820 AGCD01044322;AGCD01044323;GBDF01118229;XM_005395094 XP_005395151 MODEL 10182818 protein-coding Ppp2r3b protein phosphatase 2 regulatory subunit B''beta ENCODES a protein that exhibits calcium-dependent protein serine/threonine phosphatase activity (ortholog); chromatin binding (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955499 596146 606079 - 106146859 AGCD01063247;AGCD01063248;AGCD01063249;AGCD01063250;AGCD01063251;GBCB01020000;GBDK01183067;XM_013505589 XP_013361043 MODEL 10195713 pseudo LOC106148616 GTP-binding nuclear protein Ran pseudogene NW_004955425 1624561 1624981 - 106148616 AGCD01025237 MODEL 8854809 protein-coding Rasl10b RAS like family 10 member B INVOLVED IN positive regulation of peptide hormone secretion (ortholog); regulation of systemic arterial blood pressure by atrial natriuretic peptide (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955481 10183635 10192155 + 102019805 AGCD01057138;GBCB01022088;GBCE01123565;XM_005402887 XP_005402944 MODEL 8725963 protein-coding Irak1bp1 interleukin 1 receptor associated kinase 1 binding protein 1 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH DEVELOPMENTAL DELAY, INTELLECTUAL DISABILITY, OBESITY, AND DYSMORPHIC FEATURES (ortholog); Sjogren's syndrome (ortholog) NW_004955502 6800532 6811214 + 102005063 AGCD01064421;GBCQ01069000;XM_005406903 XP_005406960 MODEL 8879960 protein-coding Sart3 spliceosome associated factor 3, U4/U6 recycling protein ENCODES a protein that exhibits histone binding (ortholog); protein-macromolecule adaptor activity (ortholog); U4 snRNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); hematopoietic stem cell proliferation (ortholog); homeostasis of number of cells (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955455 9802260 9833326 - 102024529 AGCD01045931;GBCB01076004;XM_005396463;XM_005396464 XP_005396520;XP_005396521 MODEL 9059633 protein-coding Arsb arylsulfatase B ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-acetylgalactosamine-4-sulfatase activity (ortholog); N-acetylgalactosamine-6-sulfatase activity (ortholog); INVOLVED IN anterior head development (ortholog); autophagy (ortholog); chondroitin sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); Corneal Opacity (ortholog); FOUND IN cell surface (ortholog); lysosome (ortholog) NW_004955425 22120507 22281221 + 102025379 AGCD01025816;AGCD01025817;AGCD01025818;GBCQ01034074;GBDF01235622;XM_013514875 XP_013370329 MODEL 8896720 protein-coding LOC102022204 transmembrane protein 45A-like NW_004955427 2117389 2212016 + 102022204 AGCD01026892;AGCD01026893;AGCD01026894;GBCE01065125;XM_005386298;XM_005386299;XM_005386300;XM_005386301;XM_013515224;XM_013515225 XP_005386355;XP_005386356;XP_005386357;XP_005386358;XP_013370678;XP_013370679 MODEL 10337370 protein-coding Ccni2 cyclin I family member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); melanoma (ortholog) NW_004955408 4126198 4129209 + 106147197 AGCD01008088;AGCD01008089;GBBH01151981;XM_013507374 XP_013362828 MODEL 8772790 protein-coding Cib3 calcium and integrin binding family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955524 1386586 1391419 + 102024608 AGCD01068749;GBDF01059038;XM_005409490 XP_005409547 MODEL 8878409 protein-coding Best3 bestrophin 3 ENCODES a protein that exhibits chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); ligand-gated monoatomic anion channel activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); negative regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH aortic dissection (ortholog); atrial fibrillation (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 9957595 10031193 - 102026284 AGCD01004801;AGCD01004802;GBDI01011038;XM_013517529;XM_013517531 XP_013372983;XP_013372985 MODEL 9041515 protein-coding Cpne7 copine 7 INVOLVED IN cellular response to calcium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955541 3159485 3170304 + 102028801 AGCD01071438;AGCD01071439;GBDJ01261914;XM_013507941 XP_013363395 MODEL 8959113 ncrna LOC102003582 uncharacterized LOC102003582 NW_004955526 1543834 1552568 + 102003582 AGCD01069274;GBDF01182742;XR_264657 MODEL 8934673 protein-coding Dhx57 DExH-box helicase 57 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955441 6479107 6541281 - 102013552 AGCD01036924;AGCD01036925;AGCD01036926;AGCD01036927;AGCD01036928;AGCD01036929;GBDF01113897;XM_005390897 XP_005390954 MODEL 8734439 protein-coding Slc25a37 solute carrier family 25 member 37 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN iron import into the mitochondrion (ortholog); positive regulation of hemoglobin biosynthetic process (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH anemia (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955403 46697560 46739082 + 102019559 AGCD01002866;AGCD01002867;GBDF01004000;XM_005373702;XM_013514004;XM_013514005 XP_005373759;XP_013369458;XP_013369459 MODEL 39133387 snrna U4 U4 spliceosomal RNA 8996298 protein-coding Ric1 RIC1 partner of RAB6A GEF complex ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cranial skeletal system development (ortholog); negative regulation of protein catabolic process (ortholog); regulation of extracellular matrix constituent secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); CATIFA Syndrome (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955434 9675654 9770174 + 102004634 AGCD01032308;AGCD01032309;GBDK01079504;XM_005388664;XM_013516307 XP_005388721;XP_013371761 MODEL 39133862 misc_rna 7SK 7SK RNA 9057787 protein-coding Fabp12 fatty acid binding protein 12 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955444 90140 98048 + 102006964 AGCD01038649;AGCD01038650;GBDF01088978;XM_005392051;XM_005392052;XM_005392053 XP_005392108;XP_005392109;XP_005392110 MODEL 8921651 protein-coding LOC102005702 chromosome unknown open reading frame, human C11orf58 ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955414 31621806 31642993 + 102005702 AGCD01015759;GBDF01005761;XM_005380367;XM_005380368 XP_005380424;XP_005380425 MODEL 8748329 protein-coding Pon2 paraoxonase 2 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN lactone catabolic process (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955432 11988009 12020702 - 102018011 AGCD01030958;AGCD01030959;AGCD01030960;GBBH01032040;XM_005388064 XP_005388121 MODEL 8715918 protein-coding Frrs1 ferric chelate reductase 1 ENCODES a protein that exhibits oxidoreductase activity, acting on metal ions (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955435 4531279 4578146 - 102029896 AGCD01032832;AGCD01032833;GBDF01159747;XM_005388788 XP_005388845 MODEL 10230979 ncrna LOC106147526 uncharacterized LOC106147526 NW_004955574 512990 526973 - 106147526 AGCD01075110;GBDF01111549;XR_001232450 MODEL 8999943 protein-coding CUNH17orf78 chromosome unknown C17orf78 homolog NW_004955451 617281 645926 - 102025643 AGCD01042942;AGCD01042943;AGCD01042944;AGCD01042945;AGCD01042946;AGCD01042947;GBDF01065478;XM_005393931;XM_005393932;XM_013519174;XM_013519175 XP_005393988;XP_005393989;XP_013374628;XP_013374629 MODEL 8890208 protein-coding Ptrhd1 peptidyl-tRNA hydrolase domain containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); intellectual disability (ortholog); FOUND IN mitochondrion (ortholog) NW_004955469 6909627 6913411 - 102030622 AGCD01052399;GBCQ01099830;XM_005400397 XP_005400454 MODEL 9017176 protein-coding LOC102011468 carnosine N-methyltransferase NW_004955512 4044108 4112888 + 102011468 AGCD01066722;AGCD01066723;AGCD01066724;AGCD01066725;AGCD01066726;AGCD01066727;AGCD01066728;AGCD01066729;GBCE01103835;GBDF01121011;XM_013506528 XP_013361982 MODEL 8924097 protein-coding Irak2 interleukin 1 receptor associated kinase 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); interleukin-1-mediated signaling pathway (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955561 1585842 1650268 + 102018037 AGCD01073856;AGCD01073857;AGCD01073858;GBDK01284117;XM_005413066 XP_005413123 MODEL 10170186 protein-coding Rasl11a RAS like family 11 member A INVOLVED IN positive regulation of transcription by RNA polymerase I (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Colorectal Neoplasms (ortholog); endometriosis (ortholog); FOUND IN nucleolus (ortholog) NW_004955497 6695354 6697425 + 106146843 AGCD01062645;GBDF01251613;GBDJ01086656;XM_013505509 XP_013360963 MODEL 39134414 misc_rna 7SK 7SK RNA 39132550 snorna SNORA70 Small nucleolar RNA SNORA70 39131622 rrna 5S_rRNA 5S ribosomal RNA 9020771 pseudo LOC102013121 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955442 17346571 17349515 - 102013121 AGCD01037949 MODEL 8854013 protein-coding Ttbk2 tau tubulin kinase 2 ENCODES a protein that exhibits kinesin binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cerebellar granular layer development (ortholog); cerebellar granule cell precursor tangential migration (ortholog); cerebellum development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955416 9412297 9518561 - 102026216 AGCD01017087;AGCD01017088;GBBH01036629;GBCE01141570;XM_013512442 XP_013367896 MODEL 8849623 protein-coding Tasp1 taspase 1 ENCODES a protein that exhibits identical protein binding (ortholog); threonine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955415 22856382 23091732 - 102030625 AGCD01016545;AGCD01016546;AGCD01016547;AGCD01016548;AGCD01016549;AGCD01016550;GBDF01223881;XM_005380885;XR_001233252 XP_005380942 MODEL 8901470 protein-coding LOC102012708 uncharacterized LOC102012708 NW_004955449 15463379 15557849 - 102012708 AGCD01042194;AGCD01042195;AGCD01042196;AGCD01042197;GBDK01148150;XM_005393396;XM_005393397;XR_001235813;XR_001235814;XR_262508;XR_262509 XP_005393453;XP_005393454 MODEL 8894385 protein-coding Rab5a RAB5A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GDP-dissociation inhibitor binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); canonical Wnt signaling pathway (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN autophagy pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Myocardial Ischemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955430 11991548 12040003 + 102004840 AGCD01029472;AGCD01029473;GBDF01119494;XM_005387462;XM_013515692 XP_005387519;XP_013371146 MODEL 8934545 pseudo LOC102003922 tubulin polyglutamylase TTLL4 pseudogene NW_004955585 115408 119336 - 102003922 AGCD01075993 MODEL 8794471 pseudo LOC102026076 protein lin-28 homolog A pseudogene NW_004955407 21955426 21956050 + 102026076 AGCD01007374 MODEL 8762819 protein-coding Ddx39b DExD-box helicase 39B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on RNA (ortholog); ATP-dependent protein binding (ortholog); INVOLVED IN liver development (ortholog); mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; spliceosome pathway; ASSOCIATED WITH type 1 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955437 72835 84045 - 102009541 AGCD01034101;GBCE01002580;XM_013516925;XM_013516926 XP_013372379;XP_013372380 MODEL 8799081 ncrna LOC102009475 uncharacterized LOC102009475 NW_004955463 254981 270114 + 102009475 AGCD01049479;GBDF01303373;XR_263138 MODEL 8838154 protein-coding Dzip1l DAZ interacting zinc finger protein 1 like INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); floor plate development (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); ciliary basal body (ortholog) NW_004955501 895245 965626 + 102011681 AGCD01064043;GBDI01220148;XM_005406770;XM_005406772;XM_013505765;XM_013505766;XM_013505767;XM_013505768;XM_013505769;XM_013505770;XM_013505771;XM_013505772;XM_013505773;XM_013505774;XM_013505775;XM_013505776;XM_013505777;XM_013505778;XM_013505779;XM_013505780 XP_005406827;XP_005406829;XP_013361219;XP_013361220;XP_013361221;XP_013361222;XP_013361223;XP_013361224;XP_013361225;XP_013361226;XP_013361227;XP_013361228;XP_013361229;XP_013361230;XP_013361231;XP_013361232;XP_013361233;XP_013361234 MODEL 8699553 protein-coding LOC102005362 olfactory receptor 51I2 NW_004955414 21355079 21356017 + 102005362 AGCD01015416;XM_005380086 XP_005380143 MODEL 8817192 pseudo LOC102006437 splicing factor 45-like NW_004955411 31564696 31581136 + 102006437 AGCD01012274;AGCD01012275 MODEL 8778606 protein-coding LOC102022209 olfactory receptor 5M9-like NW_004955511 1619937 1620869 - 102022209 AGCD01066376;XM_005408238 XP_005408295 MODEL 8757184 protein-coding Arsg arylsulfatase G ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-sulfoglucosamine-3-sulfatase activity (ortholog); INVOLVED IN gene expression (ortholog); glial cell differentiation (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955478 4326669 4475559 - 102027638 AGCD01055847;AGCD01055848;AGCD01055849;AGCD01055850;AGCD01055851;GBDF01184931;XM_013503199;XM_013503200;XM_013503201;XM_013503202;XM_013503203;XM_013503204;XM_013503205;XM_013503206;XM_013503207;XM_013503208 XP_013358653;XP_013358654;XP_013358655;XP_013358656;XP_013358657;XP_013358658;XP_013358659;XP_013358660;XP_013358661;XP_013358662 MODEL 8753907 protein-coding Cpne8 copine 8 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955505 1360091 1551093 + 102004301 AGCD01064974;GBDK01142516;XM_005407109 XP_005407166 MODEL 9035780 ncrna LOC102025365 uncharacterized LOC102025365 NW_004955488 5333649 5334649 + 102025365 AGCD01059618;GBDF01159254;XR_263999 MODEL 8787400 protein-coding Eng endoglin ENCODES a protein that exhibits BMP binding (ortholog); coreceptor activity (ortholog); galactose binding (ortholog); INVOLVED IN angiogenesis (ortholog); artery morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); arteriovenous malformation (ortholog); arteriovenous malformations of the brain (ortholog); FOUND IN cell surface (ortholog); endothelial microparticle (ortholog); external side of plasma membrane (ortholog) NW_004955419 818797 853319 + 102025796 AGCD01019613;AGCD01019614;AGCD01019615;AGCD01019616;AGCD01019617;GBCQ01003907;XM_013513164;XM_013513165;XM_013513166;XM_013513167 XP_013368618;XP_013368619;XP_013368620;XP_013368621 MODEL 8904594 protein-coding Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); eukaryotic translation initiation factor 2alpha kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to amino acid starvation (ortholog); endoplasmic reticulum unfolded protein response (ortholog); PARTICIPATES IN ceramide signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955441 4908318 4944343 - 102011251 AGCD01036861;AGCD01036862;AGCD01036863;GBBH01062374;GBDJ01018096;XM_013517630 XP_013373084 MODEL 9026487 protein-coding Slc25a38 solute carrier family 25 member 38 ENCODES a protein that exhibits glycine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); glycine import into mitochondrion (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH autosomal recessive pyridoxine-refractory sideroblastic anemia 2 (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955420 29988147 29996485 - 102012762 AGCD01021524;GBCC01041557;GBDJ01135342;XM_013513554 XP_013369008 MODEL 8773292 protein-coding LOC102018880 uncharacterized protein C1orf43 NW_004956345 1240 4569 - 102018880 AGCD01079460;GBDF01045162;GBDI01007030;XM_005415197 XP_005415254 MODEL 730468968 snorna SNORD94 Small nucleolar RNA SNORD94 8827916 protein-coding Yars2 tyrosyl-tRNA synthetase 2 ENCODES a protein that exhibits L-tyrosine binding (ortholog); protein homodimerization activity (ortholog); tRNA binding (ortholog); INVOLVED IN mitochondrial tyrosyl-tRNA aminoacylation (ortholog); tRNA aminoacylation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Cafe au lait Spots, Multiple (ortholog); cardiovascular system disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955505 3004084 3011003 + 102006369 AGCD01065010;GBCB01061117;GBDF01222575;XM_005407111 XP_005407168 MODEL 8812474 protein-coding Ppp2r3c protein phosphatase 2 regulatory subunit B''gamma INVOLVED IN B cell homeostasis (ortholog); positive regulation of B cell differentiation (ortholog); regulation of antimicrobial humoral response (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Myoectodermal Gonadal Dysgenesis Syndrome (ortholog); spermatogenic failure 36 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955409 25920973 25943985 + 102030609 AGCD01010141;AGCD01010142;AGCD01010143;GBDF01005289;XM_005376927;XM_005376928;XM_013510375 XP_005376984;XP_005376985;XP_013365829 MODEL 9045262 protein-coding Lsr lipolysis stimulated lipoprotein receptor INVOLVED IN epithelial structure maintenance (ortholog); establishment of blood-brain barrier (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog); tight junction (ortholog) NW_004955468 4548774 4563341 + 102014228 AGCD01051916;GBBH01063442;XM_005400034;XM_005400035;XM_005400036;XM_005400037;XM_005400038;XM_005400039 XP_005400091;XP_005400092;XP_005400093;XP_005400094;XP_005400095;XP_005400096 MODEL 39132187 rrna 5S_rRNA 5S ribosomal RNA 8854497 protein-coding Ska3 spindle and kinetochore associated complex subunit 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); kinetochore (ortholog); meiotic spindle (ortholog) NW_004955497 1874911 1896588 - 102011217 AGCD01062479;GBBH01161825;GBDF01049973;XM_013505507 XP_013360961 MODEL 8753042 protein-coding Cib4 calcium and integrin binding family member 4 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955469 8604866 8669890 - 102015188 AGCD01052476;AGCD01052477;AGCD01052478;GBDF01156204;XM_005400438 XP_005400495 MODEL 8965289 pseudo LOC102010691 nudC domain-containing protein 2-like NW_004955475 11122125 11122610 - 102010691 AGCD01055143 MODEL 8751739 protein-coding Best4 bestrophin 4 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); ASSOCIATED WITH lymphoma (ortholog) NW_004955464 13434429 13439108 + 102011635 AGCD01050277;AGCD01050278;GBDI01362790;XM_005398742 XP_005398799 MODEL 8762922 protein-coding Ccnj cyclin J NW_004955507 2274695 2293637 + 102013739 AGCD01065584;AGCD01065585;GBDF01111077;XM_005407563;XM_005407565 XP_005407620;XP_005407622 MODEL 8860643 protein-coding Capns2 calpain small subunit 2 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog) NW_004955433 13106820 13107865 + 102005625 AGCD01031676;GBDI01243871;XM_005388318 XP_005388375 MODEL 9061946 protein-coding CUNH17orf99 chromosome unknown C17orf99 homolog INVOLVED IN mature B cell differentiation involved in immune response (ortholog); positive regulation of immunoglobulin production in mucosal tissue (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955506 4397221 4408645 - 102026773 AGCD01065338;GBDI01334322;XM_013505961 XP_013361415 MODEL 8940992 protein-coding Tlx1 T cell leukemia homeobox 1 INVOLVED IN animal organ formation (ortholog); cell fate commitment (ortholog); central nervous system development (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Aneuploidy (ortholog); Neoplastic Cell Transformation (ortholog) NW_004955485 9070601 9076063 - 102018292 AGCD01058744;GBCE01041371;XM_005403934 XP_005403991 MODEL 39134415 misc_rna 7SK 7SK RNA 8986140 protein-coding Dhx58 DExH-box helicase 58 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of innate immune response (ortholog); negative regulation of MDA-5 signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955451 16186263 16191928 - 102012597 AGCD01043658;GBBH01137215;XM_013519384;XM_013519386;XM_013519387 XP_013374838;XP_013374840;XP_013374841 MODEL 8997334 protein-coding Arsh arylsulfatase family member H ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955499 1787356 1818206 + 102012979 AGCD01063385;AGCD01063386;AGCD01063387;XM_005406525;XM_013505555 XP_005406582;XP_013361009 MODEL 10311744 protein-coding LOC106148617 translation initiation factor IF-2-like NW_004955425 12991053 12992544 + 106148617 AGCD01025523;AGCD01025524;GBDJ01095487;XM_013514769 XP_013370223 MODEL 8883181 protein-coding Ric3 RIC3 acetylcholine receptor chaperone ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog); positive regulation of protein localization to cell surface (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955414 23925149 23967772 - 102016259 AGCD01015530;AGCD01015531;AGCD01015532;GBDJ01032040;XM_005380215;XM_013512016 XP_005380272;XP_013367470 MODEL 39133863 misc_rna 7SK 7SK RNA 9061351 pseudo LOC102006803 aldo-keto reductase family 1 member C23-like protein NW_004955429 94455 445853 + 102006803 AGCD01028306;AGCD01028307;AGCD01028308;AGCD01028309;AGCD01028310;AGCD01028311;AGCD01028312;AGCD01028313;AGCD01028314;AGCD01028315;AGCD01028316;AGCD01028317;AGCD01028318;AGCD01028319;AGCD01028320;AGCD01028321;AGCD01028322;AGCD01028323;AGCD01028324;AGCD01028325;AGCD01028326;AGCD01028327;AGCD01028328;AGCD01028329;AGCD01028330;AGCD01028331;AGCD01028332;AGCD01028333;AGCD01028334;AGCD01028335;AGCD01028336;AGCD01028337;AGCD01028338;AGCD01028339;AGCD01028340;AGCD01028341;AGCD01028342;AGCD01028343;AGCD01028344;AGCD01028345;AGCD01028346;AGCD01028347;AGCD01028348;AGCD01028349;AGCD01028350;XM_005387227 MODEL 8930238 protein-coding Ttc1 tetratricopeptide repeat domain 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); unfolded protein holdase activity (ortholog); INVOLVED IN positive regulation of neuroinflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955408 13966957 14007238 + 102022786 AGCD01008379;GBDK01146252;XM_005376252;XM_005376253 XP_005376309;XP_005376310 MODEL 8714119 pseudo LOC102012709 40S ribosomal protein S29 pseudogene NW_004955587 108587 108779 - 102012709 AGCD01076058 MODEL 9021534 protein-coding LOC102024257 olfactory receptor 10AD1-like NW_004955500 7121240 7122420 - 102024257 AGCD01063901;XM_013505634 XP_013361088 MODEL 8805165 protein-coding Sash1 SAM and SH3 domain containing 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell migration (ortholog); positive regulation of lipopolysaccharide-mediated signaling pathway (ortholog); ASSOCIATED WITH alopecia (ortholog); Breast Cancer, Familial (ortholog); Cancer, Alopecia, Pigment Dyscrasia, Onychodystrophy, and Keratoderma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955439 12551361 12729500 - 102016200 AGCD01035939;AGCD01035940;AGCD01035941;AGCD01035942;AGCD01035943;AGCD01035944;AGCD01035945;GBCE01076514;GBDI01179673;XM_013517361 XP_013372815 MODEL 8858367 pseudo LOC102029995 uncharacterized LOC102029995 NW_004955529 3709422 3740571 - 102029995 AGCD01069801 MODEL 8727317 protein-coding LOC102005703 double-strand break repair protein MRE11A-like NW_004955414 105311 171913 + 102005703 AGCD01014702;AGCD01014703;AGCD01014704;AGCD01014705;AGCD01014706;GBCE01032230;GBDF01042621;XM_013512034 XP_013367488 MODEL 8979836 protein-coding Slc25a39 solute carrier family 25 member 39 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); glutathione transmembrane transporter activity (ortholog); INVOLVED IN cellular response to iron ion (ortholog); glutathione import into mitochondrion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955451 17352853 17356466 - 102012272 AGCD01043743;AGCD01043744;GBDI01005619;GBDJ01010093;XM_013519261 XP_013374715 MODEL 8703607 protein-coding LOC102007969 maestro heat-like repeat-containing protein family member 7 NW_004955406 37107660 37135900 + 102007969 AGCD01006571;GBDF01021853;XM_013522084 XP_013377538 MODEL 8742730 pseudo LOC102003583 zinc transporter ZIP2 pseudogene NW_004955436 12539750 12540990 + 102003583 AGCD01033843 MODEL 8904466 protein-coding Frrs1l ferric chelate reductase 1 like ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN regulation of AMPA glutamate receptor clustering (ortholog); regulation of glutamate receptor signaling pathway (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); choreatic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); postsynapse (ortholog) NW_004955419 17825868 17848868 + 102003969 AGCD01020165;GBCE01021181;XM_013513221 XP_013368675 MODEL 8763906 protein-coding Pon3 paraoxonase 3 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); arylesterase activity (ortholog); dihydrocoumarin hydrolase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); coumarin catabolic process (ortholog); lactone catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955432 11945383 11983417 - 102017689 AGCD01030957;AGCD01030958;GBDJ01087076;XM_005388063 XP_005388120 MODEL 8707218 pseudo LOC102011469 60S ribosomal protein L36a-like NW_004955431 5509247 5509567 - 102011469 AGCD01030034 MODEL 9032189 protein-coding LOC102005363 olfactory receptor 10A4 NW_004955414 22800006 22800953 + 102005363 AGCD01015478;XM_005380181 XP_005380238 MODEL 39133389 snrna U4 U4 spliceosomal RNA 8986391 protein-coding Dzip3 DAZ interacting zinc finger protein 3 ENCODES a protein that exhibits phosphatase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); RNA binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955427 9481196 9571483 + 102017260 AGCD01027101;AGCD01027102;GBCQ01179483;XM_005386361;XM_013515123;XM_013515124;XM_013515125;XM_013515126;XM_013515127;XR_001234381 XP_005386418;XP_013370577;XP_013370578;XP_013370579;XP_013370580;XP_013370581 MODEL 39132537 snorna SNORA70 Small nucleolar RNA SNORA70 9011473 pseudo LOC102025367 polyprenol reductase-like NW_004955490 2653858 2656890 + 102025367 AGCD01060146 MODEL 8933571 protein-coding Rasl11b RAS like family 11 member B ENCODES a protein that exhibits transforming growth factor beta receptor binding (ortholog); INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955447 17755277 17758827 - 102010750 AGCD01041134;GBCE01186100;GBDI01325397;XM_013518526 XP_013373980 MODEL 8899185 pseudo LOC102013124 U2 small nuclear ribonucleoprotein B'' pseudogene NW_004955446 10921532 10922206 + 102013124 AGCD01040192 MODEL 8778741 protein-coding Engase endo-beta-N-acetylglucosaminidase ENCODES a protein that exhibits mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955506 3647302 3658676 - 102025928 AGCD01065318;GBDJ01312297;XM_005407343;XM_013506115 XP_005407400;XP_013361569 MODEL 8953012 protein-coding Fabp2 fatty acid binding protein 2 ENCODES a protein that exhibits fatty acid binding (ortholog); long-chain fatty acid binding (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN energy homeostasis (ortholog); fatty acid metabolic process (ortholog); fatty acid transport (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); carotid stenosis (ortholog); coronary artery disease (ortholog); FOUND IN apical cortex (ortholog); microvillus (ortholog) NW_004955428 20930512 20933950 + 102021995 AGCD01028128;XM_005386793 XP_005386850 MODEL 8816373 protein-coding LOC102003924 uncharacterized LOC102003924 NW_004955402 38979252 38993934 + 102003924 AGCD01000974;GBDF01101946;NM_001371756;XM_005373171;XM_013522414 NP_001358685;XP_005373228;XP_013377868 VALIDATED 10309701 protein-coding LOC106147528 dapper homolog 3-like NW_004955574 707908 708987 - 106147528 AGCD01075124;GBDF01189353;GBDK01285168;XM_013509564 XP_013365018 MODEL 8777557 pseudo LOC102006807 oligosaccharyltransferase complex subunit OSTC pseudogene NW_004955512 4327196 4330962 + 102006807 AGCD01066741 MODEL 39132190 rrna 5S_rRNA 5S ribosomal RNA 8723486 protein-coding Ppp2r5a protein phosphatase 2 regulatory subunit B'alpha ENCODES a protein that exhibits kinase binding (ortholog); kinase inhibitor activity (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN negative regulation of protein localization to plasma membrane (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Emphysema (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 5059826 5115312 - 102014416 AGCD01005711;GBDK01003948;XM_005375450 XP_005375507 MODEL 8763230 protein-coding Lss lanosterol synthase ENCODES a protein that exhibits lanosterol synthase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); regulation of protein stability (ortholog); steroid biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia-mental retardation syndrome 4 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955407 42633658 42653399 - 102024648 AGCD01007894;GBDF01088470;XM_013505726 XP_013361180 MODEL 9064179 protein-coding Pts 6-pyruvoyltetrahydropterin synthase ENCODES a protein that exhibits 6-pyruvoyltetrahydropterin synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN tetrahydrobiopterin biosynthetic process (ortholog); tetrahydrobiopterin metabolic process (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); BH4-deficient hyperphenylalaninemia A (ortholog); BH4-deficient hyperphenylalaninemia B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955412 13880937 13888562 + 102030166 AGCD01012846;AGCD01012847;GBDJ01399101;XM_005378120 XP_005378177 MODEL 9039470 protein-coding LOC102006440 olfactory receptor 8D2-like NW_004955412 25129549 25130483 - 102006440 AGCD01013136;XM_013510980 XP_013366434 MODEL 8889230 ncrna LOC102022210 uncharacterized LOC102022210 NW_004955430 21915871 21918767 - 102022210 AGCD01029779;GBDI01242038;XR_001234565;XR_261435 MODEL 8818579 protein-coding Irak3 interleukin 1 receptor associated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 12839995 12880285 + 102010132 AGCD01047791;GBDJ01062726;XM_013520896 XP_013376350 MODEL 39131623 rrna 5S_rRNA 5S ribosomal RNA 8750291 protein-coding Skap1 src kinase associated phosphoprotein 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein phosphatase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of adaptive immune response (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of cell-cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 12791633 13043249 + 102007962 AGCD01043430;AGCD01043431;AGCD01043432;AGCD01043433;AGCD01043434;AGCD01043435;AGCD01043436;AGCD01043437;AGCD01043438;AGCD01043439;AGCD01043440;AGCD01043441;AGCD01043442;AGCD01043443;AGCD01043444;GBDI01286676;XM_005394244;XM_005394245;XM_005394246;XM_013519393 XP_005394301;XP_005394302;XP_005394303;XP_013374847 MODEL 9014587 protein-coding Cpne9 copine family member 9 INVOLVED IN positive regulation of dendrite extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog) NW_004955561 1238916 1258000 + 102005519 AGCD01073844;GBDI01105631;XM_005413020;XM_013509080 XP_005413077;XP_013364534 MODEL 8877151 protein-coding Tat tyrosine aminotransferase ENCODES a protein that exhibits amino acid binding (ortholog); identical protein binding (ortholog); L-tyrosine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); amino acid metabolic process (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH alcohol withdrawal syndrome (ortholog); genetic disease (ortholog); tyrosinemia (ortholog); FOUND IN cytosol (ortholog) NW_004955484 4278083 4287535 - 102011994 AGCD01058206;GBDF01020940;XM_005403508;XM_005403509 XP_005403565;XP_005403566 MODEL 39134416 misc_rna 7SK 7SK RNA 8967815 protein-coding LOC102026077 chromosome unknown open reading frame, human C12orf71 ASSOCIATED WITH lung cancer (ortholog); testicular germ cell cancer (ortholog); Testicular Germ Cell Tumor (ortholog) NW_004955457 4101646 4104511 - 102026077 AGCD01046786;GBDF01192951;XM_005396936;XM_013520737 XP_005396993;XP_013376191 MODEL 8757531 protein-coding Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); eukaryotic translation initiation factor 2alpha kinase activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Chronic Hepatitis B (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 210867 279267 + 102016725 AGCD01024168;AGCD01024169;AGCD01024170;GBBH01143001;GBBH01143002;XM_013514710 XP_013370164 MODEL 10384249 pseudo LOC106148618 40S ribosomal protein SA-like NW_004955403 19573080 19584286 + 106148618 AGCD01002138 MODEL 8834064 protein-coding Tlx2 T cell leukemia homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN enteric nervous system development (ortholog); mesoderm formation (ortholog); negative regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH intestinal pseudo-obstruction (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955424 11269426 11275200 - 102021364 AGCD01024559;AGCD01024560;GBDF01120108;XM_005385483 XP_005385540 MODEL 39133864 misc_rna 7SK 7SK RNA 8795745 protein-coding Arsi arylsulfatase family member I ASSOCIATED WITH autism spectrum disorder (ortholog); hereditary spastic paraplegia (ortholog); malaria (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955415 4234491 4240970 + 102017005 AGCD01015968;GBDK01300795;XM_005380580 XP_005380637 MODEL 8820361 ncrna LOC102009476 uncharacterized LOC102009476 NW_004955463 10007303 10028051 - 102009476 AGCD01049804;AGCD01049805;GBDF01223582;XR_263166 MODEL 8850899 protein-coding Ybey ybeY metalloendoribonuclease ENCODES a protein that exhibits RNA endonuclease activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) NW_004955407 42706407 42710962 + 102017954 AGCD01007895;GBCE01160007;XM_005375930;XR_001231523;XR_259644;XR_259645 XP_005375987 MODEL 8932772 pseudo LOC102012710 GTP:AMP phosphotransferase AK3, mitochondrial pseudogene NW_004955402 34583997 34587079 + 102012710 AGCD01000866 MODEL 9044298 protein-coding Fabp3 fatty acid binding protein 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fatty acid binding (ortholog); icosatetraenoic acid binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cholesterol homeostasis (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Down syndrome (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular region (ortholog); sarcoplasm (ortholog) NW_004955452 9851182 9858735 - 102008178 AGCD01044261;GBDK01270117;XM_013519714 XP_013375168 MODEL 8706800 protein-coding LOC102018881 keratin, type I cytoskeletal 28 NW_004955451 15254864 15264012 - 102018881 AGCD01043603;AGCD01043604;GBDK01170754;XM_005394373 XP_005394430 MODEL 8971229 protein-coding LOC102024261 olfactory receptor 1052-like NW_004955511 2737665 2739242 - 102024261 AGCD01066427;GBDF01076871;XM_005408019 XP_005408076 MODEL 8868588 pseudo LOC102005705 selenoprotein T pseudogene NW_004955474 8104963 8107680 + 102005705 AGCD01054542 MODEL 8813664 protein-coding Caprin1 cell cycle associated protein 1 ENCODES a protein that exhibits ATP binding (ortholog); molecular condensate scaffold activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN generation of neurons (ortholog); intracellular mRNA localization (ortholog); membraneless organelle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955422 12126893 12170877 - 102018612 AGCD01022776;AGCD01022777;AGCD01022778;AGCD01022779;GBDF01011002;XM_005384149;XM_005384151 XP_005384206;XP_005384208 MODEL 8771120 protein-coding CUNH18orf32 chromosome unknown C18orf32 homolog INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Glycosylphosphatidylinositol Biosynthesis Defect 25 (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955402 34562221 34566677 - 102012143 AGCD01000864;AGCD01000865;GBBH01061210;XM_005372908;XM_005372909 XP_005372965;XP_005372966 MODEL 8757079 protein-coding Ccnjl cyclin J like ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955408 14119901 14165545 - 102024649 AGCD01008384;GBBH01009087;GBDF01224331;XM_005376258 XP_005376315 MODEL 8854048 protein-coding Rab5b RAB5B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP-dependent protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); esotropia (ortholog); lung cancer (ortholog); FOUND IN early endosome membrane (ortholog); endocytic vesicle (ortholog); endosome (ortholog) NW_004955458 3563363 3582620 + 102026402 AGCD01047320;AGCD01047321;AGCD01047322;AGCD01047323;AGCD01047324;GBCB01000783;GBDF01126202;XM_013520906 XP_013376360 MODEL 8857378 protein-coding E2f1 E2F transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anoikis (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear chromosome (ortholog) NW_004955422 27638625 27643261 + 102003151 AGCD01023330;GBDF01187864;XM_013513814 XP_013369268 MODEL 616940648 snorna SNORD95 Small nucleolar RNA SNORD95 8723832 protein-coding Ddx3x DEAD-box helicase 3 X-linked ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); CTPase activity (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); cellular response to osmotic stress (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); FOUND IN canonical inflammasome complex (ortholog); cell leading edge (ortholog); centrosome (ortholog) NW_004955565 1387043 1403624 - 102030251 AGCD01074316;AGCD01074317;GBCB01000529;XM_005413259 XP_005413316 MODEL 9062780 protein-coding Ric8a RIC8 guanine nucleotide exchange factor A ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); basement membrane organization (ortholog); cell migration involved in gastrulation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955476 11827004 11833495 - 102029962 AGCD01055475;GBBH01139853;XM_005401889;XM_005401890;XM_013502915 XP_005401946;XP_005401947;XP_013358369 MODEL 9059870 ncrna LOC102030002 uncharacterized LOC102030002 NW_004955544 463773 464538 + 102030002 AGCD01071705;GBDF01001543;XR_264865 MODEL 8753865 pseudo LOC102003588 60S ribosomal protein L37 pseudogene NW_004955440 16839141 16839617 + 102003588 AGCD01036533 MODEL 8826608 pseudo LOC102010693 charged multivesicular body protein 1b-like NW_004955416 11825639 11828480 - 102010693 AGCD01017192 MODEL 10150011 protein-coding LOC106148620 uncharacterized LOC106148620 NW_004955425 20182982 20193741 - 106148620 AGCD01025719;GBBH01195768;XM_013514772 XP_013370226 MODEL 8910507 protein-coding Sash3 SAM and SH3 domain containing 3 INVOLVED IN homeostasis of number of cells within a tissue (ortholog); positive regulation of adaptive immune response (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH asthma (ortholog); Brain Abscess (ortholog); Cafe au lait Spots, Multiple (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955473 5224635 5237066 - 102012856 AGCD01053973;GBBH01090094;XM_005401258 XP_005401315 MODEL 9009375 protein-coding Slc25a4 solute carrier family 25 member 4 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); ATP:ADP antiporter activity (ortholog); enzyme binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); ADP transport (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); Alzheimer's disease (ortholog); autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 2 (ortholog); FOUND IN membrane (ortholog); membrane raft (ortholog); mitochondrial inner membrane (ortholog) NW_004955403 23878329 23882322 - 102003079 AGCD01002262;AGCD01002263;GBCB01005621;XM_005373479 XP_005373536 MODEL 8770290 protein-coding Pop1 POP1 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); tRNA decay (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anauxetic dysplasia 1 (ortholog); anauxetic dysplasia 2 (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955417 13823027 13856448 + 102010157 AGCD01018191;GBCE01138351;XM_005381847 XP_005381904 MODEL 8758750 protein-coding LOC102005364 sulfotransferase 1C3 NW_004955470 11921964 11938687 + 102005364 AGCD01052911;AGCD01052912;AGCD01052913;AGCD01052914;GBCQ01008545;GBCQ01008546;XM_013522838 XP_013378292 MODEL 9053137 protein-coding Ppp2r5b protein phosphatase 2 regulatory subunit B'beta INVOLVED IN cellular response to growth factor stimulus (ortholog); negative regulation of G0 to G1 transition (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN protein phosphatase type 2A complex (ortholog) NW_004955422 20252306 20260776 - 102022091 AGCD01023072;GBCB01023268;XM_005384532;XM_005384533;XM_013513967;XM_013513968 XP_005384589;XP_005384590;XP_013369421;XP_013369422 MODEL 39133391 snrna U4 U4 spliceosomal RNA 8810371 pseudo LOC102006441 rRNA-processing protein UTP23 homolog pseudogene NW_004955412 35586005 35587704 - 102006441 AGCD01013412 MODEL 39132526 snorna SNORA70 Small nucleolar RNA SNORA70 8907411 pseudo LOC102025373 meteorin pseudogene NW_004955422 20231565 20233265 + 102025373 AGCD01023070 MODEL 8791165 protein-coding LOC102013125 olfactory receptor 12D3 NW_004955576 1441105 1442064 - 102013125 AGCD01075376;XM_005413957 XP_005414014 MODEL 8876929 protein-coding Irak4 interleukin 1 receptor associated kinase 4 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-33-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955500 3010505 3039090 + 102005061 AGCD01063725;AGCD01063726;AGCD01063727;GBDF01124062;GBDF01124069;XM_005406580;XM_005406582;XM_005406583;XM_013505686;XM_013505687 XP_005406637;XP_005406639;XP_005406640;XP_013361140;XP_013361141 MODEL 8798141 protein-coding Dhx8 DEAH-box helicase 8 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 16941422 16963690 + 102004549 AGCD01043713;AGCD01043714;GBDF01047527;XM_005394503 XP_005394560 MODEL 8744107 protein-coding Rasl12 RAS like family 12 ASSOCIATED WITH lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955450 10352574 10363906 + 102009901 AGCD01042614;GBCB01061740;GBCE01108831;XM_005393733 XP_005393790 MODEL 39134417 misc_rna 7SK 7SK RNA 39133865 misc_rna 7SK 7SK RNA 8739978 protein-coding LOC102007971 keratin-associated protein 20-2-like NW_004955407 30174961 30175134 + 102007971 AGCD01007628;XM_005375643 XP_005375700 MODEL 8744051 pseudo LOC102006809 40S ribosomal protein SA pseudogene NW_004955431 11112412 11113388 - 102006809 AGCD01030224 MODEL 8772275 ncrna LOC102012713 uncharacterized LOC102012713 NW_004955599 522218 526724 - 102012713 AGCD01076655;GBDI01339273;XR_001232551;XR_001232552;XR_265154 MODEL 8834147 protein-coding Frs2 fibroblast growth factor receptor substrate 2 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); neurotrophin TRKA receptor binding (ortholog); transmembrane receptor protein tyrosine kinase adaptor activity (ortholog); INVOLVED IN anterior/posterior axis specification, embryo (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); renal cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955405 9785857 9884220 + 102024974 AGCD01004796;AGCD01004797;AGCD01004798;GBBH01020952;XM_005374300;XM_013517516;XM_013517522;XM_013517523 XP_005374357;XP_013372970;XP_013372976;XP_013372977 MODEL 8797986 protein-coding LOC102024264 olfactory receptor 4C15-like NW_004955511 221759 222697 + 102024264 AGCD01066325;XM_013506519 XP_013361973 MODEL 8782956 protein-coding Ybx1 Y-box binding protein 1 ENCODES a protein that exhibits C5-methylcytidine-containing RNA reader activity (ortholog); chromatin binding (ortholog); GTPase binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); CRD-mediated mRNA stabilization (ortholog); epidermis development (ortholog); PARTICIPATES IN cisplatin drug pathway; p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN CRD-mediated mRNA stability complex (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955537 2234052 2254528 + 102016420 AGCD01070920;AGCD01070921;GBBH01004351;GBCQ01008012;XM_005410716 XP_005410773 MODEL 8894302 ncrna LOC102030003 uncharacterized LOC102030003 NW_004955440 15726430 15747000 - 102030003 AGCD01036496;AGCD01036497;GBDF01016979;XR_262026 MODEL 8843136 protein-coding Lst1 leukocyte specific transcript 1 INVOLVED IN dendrite development (ortholog); negative regulation of lymphocyte proliferation (ortholog); ASSOCIATED WITH graft-versus-host disease (ortholog); Inflammation (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955437 127430 129835 + 102013647 AGCD01034102;GBDK01077421;XM_005389328;XM_013516930;XM_013516931 XP_005389385;XP_013372384;XP_013372385 MODEL 39131624 rrna 5S_rRNA 5S ribosomal RNA 8849562 protein-coding Enho energy homeostasis associated ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN energy homeostasis (ortholog); positive regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955472 1597488 1599274 + 102028290 AGCD01053403;GBCB01042932;GBDI01326897;XM_005401075 XP_005401132 MODEL 8845504 pseudo LOC102005366 acyl-protein thioesterase 1 pseudogene NW_004955414 31575081 31575919 + 102005366 AGCD01015757 MODEL 9017659 protein-coding CUNH18orf63 chromosome unknown C18orf63 homolog INVOLVED IN male gonad development (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955402 57753626 57805255 + 102012712 AGCD01001510;AGCD01001511;AGCD01001512;AGCD01001513;GBDF01306192;XM_005373078;XM_013502881 XP_005373135;XP_013358335 MODEL 9051021 protein-coding Ttc12 tetratricopeptide repeat domain 12 INVOLVED IN axonemal dynein complex assembly (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alcohol dependence (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955412 14945237 15011560 + 102007096 AGCD01012863;AGCD01012864;AGCD01012865;GBDF01016223;XM_005378139;XM_005378141;XM_005378142;XM_013511097 XP_005378196;XP_005378198;XP_005378199;XP_013366551 MODEL 8756018 protein-coding LOC102003925 protein FAM127A NW_004955602 174103 174639 - 102003925 AGCD01076766;GBCB01040403;XM_005414829 XP_005414886 MODEL 8756670 protein-coding Ccnk cyclin K ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activity (ortholog); protein kinase binding (ortholog); RNA polymerase II CTD heptapeptide repeat kinase activity (ortholog); INVOLVED IN DNA damage response (ortholog); host-mediated suppression of viral genome replication (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH HYPERTELORISM AND DISTINCTIVE FACIES (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cyclin K-CDK12 complex (ortholog); cyclin K-CDK13 complex (ortholog); nucleoplasm (ortholog) NW_004955438 20826818 20850496 + 102028340 AGCD01035523;AGCD01035524;GBDF01008465;XM_013517170 XP_013372624 MODEL 10265739 protein-coding Rab5c RAB5C, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endocytosis (ortholog); endosomal transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH angiokeratoma (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 41 (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); exocytic vesicle (ortholog) NW_004955451 16200442 16215583 - 106146228 AGCD01043660;GBCQ01075012;XM_005394449 XP_005394506 MODEL 9049102 pseudo LOC102009479 60S ribosomal protein L26-like NW_004955466 1763067 1764140 + 102009479 AGCD01050717 MODEL 39132192 rrna 5S_rRNA 5S ribosomal RNA 10205715 ncrna LOC106147530 uncharacterized LOC106147530 NW_004955574 416191 421964 - 106147530 AGCD01075104;AGCD01075105;GBDF01270534;XR_001232451 MODEL 9064547 protein-coding Ddx4 DEAD-box helicase 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); male infertility (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955446 11967222 12025537 - 102015061 AGCD01040220;AGCD01040221;AGCD01040222;GBDF01001983;XM_005392693;XM_005392694 XP_005392750;XP_005392751 MODEL 8828251 protein-coding E2f2 E2F transcription factor 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); lens fiber cell apoptotic process (ortholog); negative regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); Disease Progression (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955452 3498077 3518033 - 102016226 AGCD01043927;AGCD01043928;GBBH01166880;XM_005394765;XM_005394766 XP_005394822;XP_005394823 MODEL 8901390 protein-coding Fabp4 fatty acid binding protein 4 ENCODES a protein that exhibits hormone receptor binding (ortholog); lipase activator activity (ortholog); long-chain fatty acid binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to lithium ion (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); nucleus (ortholog) NW_004955444 141955 146279 + 102007709 AGCD01038652;GBCQ01009929;XM_005392054 XP_005392111 MODEL 9017307 ncrna LOC102022212 uncharacterized LOC102022212 NW_004955513 1174004 1189098 - 102022212 AGCD01066845;GBDF01010708;XR_001231739 MODEL 8714068 protein-coding LOC102011483 tryptase-like NW_004955442 16039127 16040641 + 102011483 AGCD01037891;GBCE01068870;XM_005391590 XP_005391647 MODEL 8957701 protein-coding Pttg1 PTTG1 regulator of sister chromatid separation, securin ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); heat shock protein binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Prostate Cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955408 14293704 14301357 + 102027493 AGCD01008391;GBDF01007519;XM_005376266;XM_005376267 XP_005376323;XP_005376324 MODEL 8715506 protein-coding LOC102010697 olfactory receptor 2L3-like NW_004955418 30109107 30110042 + 102010697 AGCD01019503;XM_005382366 XP_005382423 MODEL 9006037 protein-coding LOC102003590 olfactory receptor 1361-like NW_004955442 14147658 14149906 - 102003590 AGCD01037802;XM_013517700 XP_013373154 MODEL 8739337 ncrna LOC102005707 uncharacterized LOC102005707 NW_004955478 5365809 5429517 + 102005707 AGCD01055871;AGCD01055872;GBDF01254563;XR_001230866;XR_263698 MODEL 9016921 protein-coding Cpo carboxypeptidase O ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955457 8011414 8038758 - 102026834 AGCD01046900;XM_005397114 XP_005397171 MODEL 8966265 protein-coding Sass6 SAS-6 centriolar assembly protein INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); positive regulation of centriole replication (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955435 4832284 4876077 - 102022223 AGCD01032855;AGCD01032856;AGCD01032857;AGCD01032858;AGCD01032859;AGCD01032860;GBDI01383796;GBDK01218416;XM_005389097 XP_005389154 MODEL 8856931 protein-coding Caprin2 caprin family member 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955505 4431921 4477434 + 102012880 AGCD01065113;AGCD01065114;GBBH01155285;GBDF01011219;XM_013505958 XP_013361412 MODEL 8727424 protein-coding Tatdn1 TatD DNase domain containing 1 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); DNA endonuclease activity (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955540 3154273 3198140 - 102008147 AGCD01071335;AGCD01071336;GBBH01177239;XM_013507914;XM_013507915;XM_013507917;XR_001232123;XR_001232124;XR_001232125;XR_001232126 XP_013363368;XP_013363369;XP_013363371 MODEL 39132516 snorna SNORA70 Small nucleolar RNA SNORA70 8821663 pseudo LOC102026080 HORMA domain-containing protein 1-like NW_004955409 24899247 24900573 - 102026080 AGCD01010095 MODEL 8712175 protein-coding Cibar1 CBY1 interacting BAR domain containing 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cilium assembly (ortholog); inner mitochondrial membrane organization (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH ciliopathy (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955417 10060500 10080119 + 102018928 AGCD01018065;GBDF01009145;XM_005381785 XP_005381842 MODEL 8987533 protein-coding Ybx2 Y-box binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); lipid binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); negative regulation of translation (ortholog); oocyte development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); ribonucleoprotein complex (ortholog) NW_004955467 9624506 9629904 + 102008613 AGCD01051520;GBDF01004444;XM_013522114;XM_013522115;XM_013522116;XM_013522117;XM_013522118 XP_013377568;XP_013377569;XP_013377570;XP_013377571;XP_013377572 MODEL 8805749 protein-coding Bet1 Bet1 golgi vesicular membrane trafficking protein INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); vesicle fusion with Golgi apparatus (ortholog); ASSOCIATED WITH congenital muscular dystrophy with rapid progression (ortholog); COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955432 10762973 10774744 - 102011573 AGCD01030936;GBDF01048008;XM_005388040 XP_005388097 MODEL 8809845 protein-coding Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ENCODES a protein that exhibits eukaryotic translation initiation factor 2alpha kinase activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to cold (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955416 6897897 7005602 + 102013603 AGCD01016957;AGCD01016958;AGCD01016959;AGCD01016960;AGCD01016961;GBBH01172188;XM_005381212 XP_005381269 MODEL 8844732 protein-coding LOC102006443 natural killer cells antigen CD94-like NW_004955413 7595934 7604789 - 102006443 AGCD01013826;AGCD01013827;GBDF01001494;XM_005378931;XR_260067;XR_260068 XP_005378988 MODEL 8968803 protein-coding Ireb2 iron responsive element binding protein 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); iron-responsive element binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to hypoxia (ortholog); cellular response to iron(III) ion (ortholog); PARTICIPATES IN doxorubicin response pathway; ferroptosis pathway; iron homeostasis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anemia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 852554 898908 + 102010110 AGCD01042344;AGCD01042345;GBDF01157505;XM_005393448 XP_005393505 MODEL 8868496 protein-coding Arsj arylsulfatase family member J ASSOCIATED WITH stomach cancer (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955428 25373664 25436251 + 102030219 AGCD01028282;GBCE01179357;XM_005386815 XP_005386872 MODEL 8767456 protein-coding Ric8b RIC8 guanine nucleotide exchange factor B ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein folding chaperone (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); sensory perception of smell (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955405 40659946 40782870 + 102023663 AGCD01005522;AGCD01005523;AGCD01005524;AGCD01005525;AGCD01005526;AGCD01005527;AGCD01005528;GBDK01360337;XM_013519064;XM_013519068;XM_013519080;XM_013519087;XM_013519095;XR_001235931;XR_001235932;XR_001235933;XR_001235934;XR_001235936 XP_013374518;XP_013374522;XP_013374534;XP_013374541;XP_013374549 MODEL 8916131 pseudo LOC102012714 heterogeneous nuclear ribonucleoprotein A3-like NW_004955402 57336253 57364330 - 102012714 AGCD01001495 MODEL 8901788 ncrna LOC102006811 uncharacterized LOC102006811 NW_004955514 2676803 2682633 - 102006811 AGCD01067085;GBBH01015914;XR_001231769;XR_001231770;XR_001231771 MODEL 8958331 protein-coding Skap2 src kinase associated phosphoprotein 2 INVOLVED IN negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955410 28447073 28618450 - 102028940 AGCD01011250;AGCD01011251;AGCD01011252;AGCD01011253;AGCD01011254;GBDJ01316638;XM_005377444 XP_005377501 MODEL 9053708 protein-coding Ppp2r5c protein phosphatase 2 regulatory subunit B'gamma ENCODES a protein that exhibits peptidase activity (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN chromosome, centromeric region (ortholog); membrane (ortholog); nucleoplasm (ortholog) NW_004955538 1233511 1363956 + 102022745 AGCD01071054;AGCD01071055;AGCD01071056;GBCE01075191;GBDF01002398;XM_013507826 XP_013363280 MODEL 8790708 protein-coding Frs3 fibroblast growth factor receptor substrate 3 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955437 8166724 8182551 - 102017054 AGCD01034479;AGCD01034480;GBDJ01029585;XM_005389701;XM_005389702;XM_013517052;XM_013517053;XM_013517054;XM_013517056 XP_005389758;XP_005389759;XP_013372506;XP_013372507;XP_013372508;XP_013372510 MODEL 39133447 snorna SNORD96 Small nucleolar RNA SNORD96 family 8847202 protein-coding Lta lymphotoxin alpha INVOLVED IN defense response to Gram-positive bacterium (ortholog); humoral immune response (ortholog); lymph node development (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); allergic disease (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog); tumor necrosis factor receptor superfamily complex (ortholog) NW_004955437 114216 116003 + 102011907 AGCD01034101;GBBH01094522;XM_005389322;XM_005389323 XP_005389379;XP_005389380 MODEL 9020184 pseudo LOC102018882 microtubule-associated protein RP/EB family member 1 pseudogene NW_004955403 4209027 4215282 + 102018882 AGCD01001781 MODEL 8713097 protein-coding CUNH19orf18 chromosome unknown C19orf18 homolog ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955584 682191 690357 - 102027474 AGCD01075955;GBDF01260757;XM_013509846 XP_013365300 MODEL 8807181 protein-coding Rassf1 Ras association domain family member 1 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of protein ubiquitination (ortholog); protein stabilization (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); bladder disease (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleus (ortholog) NW_004955532 2132892 2142106 - 102004113 AGCD01070219;AGCD01070220;GBDF01153768;GBDK01000157;XM_005410266;XM_005410267 XP_005410323;XP_005410324 MODEL 8770648 protein-coding Ccnl1 cyclin L1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); regulation of RNA splicing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cyclin L-CDK11 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog) NW_004955448 8112774 8125912 - 102021926 AGCD01041436;AGCD01041437;GBCQ01070200;GBDK01003148;XM_013518630 XP_013374084 MODEL 10279195 protein-coding LOC106148621 uncharacterized LOC106148621 NW_004955425 21322635 21332394 + 106148621 AGCD01025787;XM_013514774 XP_013370228 MODEL 39133866 misc_rna 7SK 7SK RNA 39133393 snrna U4 U4 spliceosomal RNA 9008276 ncrna LOC102024265 uncharacterized LOC102024265 NW_004955512 989850 1004243 - 102024265 AGCD01066628;XR_264441 MODEL 8771979 protein-coding LOC102022214 netrin-G2 NW_004955513 1701358 1708547 + 102022214 AGCD01066860;GBCB01097797;GBDK01407709;XM_013506742 XP_013362196 MODEL 9017910 pseudo LOC102003591 etoposide-induced protein 2.4 homolog pseudogene NW_004955442 5873690 5874760 - 102003591 AGCD01037571 MODEL 8795534 pseudo LOC102010711 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955502 1434 3248 + 102010711 AGCD01064229 MODEL 8842745 pseudo LOC102025378 pre-mRNA-splicing factor SPF27 pseudogene NW_004955425 25170569 25172343 - 102025378 AGCD01025910 MODEL 8942972 protein-coding Pttg1ip PTTG1 interacting protein ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 41753855 41769107 - 102010126 AGCD01007879;AGCD01007880;AGCD01007881;GBCE01004518;GBDI01017833;XM_005375903 XP_005375960 MODEL 8722047 protein-coding Tlx3 T cell leukemia homeobox 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell fate specification (ortholog); central nervous system development (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH breast cancer (ortholog); congenital central hypoventilation syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 24103123 24105292 + 102020767 AGCD01008594;XM_005376328 XP_005376385 MODEL 8762009 pseudo LOC102005367 complement component 1 Q subcomponent-binding protein, mitochondrial pseudogene NW_004955414 29861056 29862411 - 102005367 AGCD01015717 MODEL 8722159 protein-coding Enkd1 enkurin domain containing 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN establishment of mitotic spindle orientation (ortholog); motile cilium assembly (ortholog); non-motile cilium assembly (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955484 9015744 9019781 + 102025124 AGCD01058403;GBDJ01311527;XM_005403628;XM_005403629 XP_005403685;XP_005403686 MODEL 39134418 misc_rna 7SK 7SK RNA 8907599 protein-coding Ski SKI proto-oncogene ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); bone morphogenesis (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic aneurysm (ortholog); atrial heart septal defect (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear body (ortholog) NW_004955486 8857693 8921821 - 102008948 AGCD01059156;GBCC01038296;GBCE01052647;XM_005404174 XP_005404231 MODEL 8848473 protein-coding Caps calcyphosine INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog) NW_004955495 3549455 3550965 - 102019612 AGCD01061862;GBCE01003994;XM_005405741 XP_005405798 MODEL 8870671 pseudo LOC102022215 beclin 1-associated autophagy-related key regulator pseudogene NW_004955432 3101480 3103277 + 102022215 AGCD01030628 MODEL 8862879 protein-coding LOC102003926 multidrug resistance protein 3 NW_004955607 307152 369339 + 102003926 AGCD01076983;AGCD01076984;XM_005414906;XM_013510114 XP_005414963;XP_013365568 MODEL 9028340 protein-coding Tatdn2 TatD DNase domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955561 1653471 1673260 + 102018344 AGCD01073859;AGCD01073860;AGCD01073861;GBCQ01005537;GBDF01127617;XM_005413068 XP_005413125 MODEL 9008699 ncrna LOC102007974 uncharacterized LOC102007974 NW_004955462 12999013 13022290 + 102007974 AGCD01049421;GBDF01013996;XR_263132 MODEL 8871078 protein-coding Bet1l Bet1 golgi vesicular membrane trafficking protein like ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN regulation of retrograde vesicle-mediated transport, Golgi to ER (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); endometrial adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955476 11833595 11836411 + 102003233 AGCD01055475;GBDK01142903;XM_005401891;XM_013502918 XP_005401948;XP_013358372 MODEL 10334414 ncrna LOC106147531 uncharacterized LOC106147531 NW_004955574 312795 317846 + 106147531 AGCD01075098;GBDF01280755;XR_001232452;XR_001232453 MODEL 8999777 protein-coding Ybx3 Y-box binding protein 3 ENCODES a protein that exhibits DNA binding (ortholog); mRNA 3'-UTR binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular hyperosmotic response (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955413 7090085 7111542 + 102020236 AGCD01013798;AGCD01013799;AGCD01013800;GBBH01032211;GBCE01028229;XM_013511652 XP_013367106 MODEL 8729671 protein-coding Eif2b1 eukaryotic translation initiation factor 2B subunit alpha ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); negative regulation of guanyl-nucleotide exchange factor activity (ortholog); oligodendrocyte development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955482 5380121 5388588 + 102015199 AGCD01057326;GBDF01160540;XM_005403026;XM_013503549 XP_005403083;XP_013359003 MODEL 8802796 protein-coding LOC102006450 cytochrome c oxidase assembly factor 5 INVOLVED IN copper ion homeostasis (ortholog); leukocyte differentiation (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 2 (ortholog); mitochondrial complex IV deficiency nuclear type 9 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955470 5042072 5051007 - 102006450 AGCD01052743;GBCE01159196;XM_005400725 XP_005400782 MODEL 8904063 protein-coding Slc25a40 solute carrier family 25 member 40 ENCODES a protein that exhibits glutathione transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955432 5191197 5244587 - 102016941 AGCD01030767;AGCD01030768;AGCD01030769;GBCQ01073228;GBDF01251683;XM_013516045 XP_013371499 MODEL 8993004 protein-coding Irf1 interferon regulatory factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN apoptotic process (ortholog); canonical NF-kappaB signal transduction (ortholog); CD8-positive, alpha-beta T cell differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; Jak-Stat signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH allergic conjunctivitis (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955408 3882282 3887965 - 102029590 AGCD01008079;GBCQ01125407;GBDK01000102;XM_005376102 XP_005376159 MODEL 9024922 protein-coding Pop4 POP4 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955468 7983394 7994863 - 102012524 AGCD01052018;GBDI01104355;XM_005400112;XM_005400113;XM_005400114;XM_005400115 XP_005400169;XP_005400170;XP_005400171;XP_005400172 MODEL 8755482 protein-coding Fabp5 fatty acid binding protein 5 ENCODES a protein that exhibits fatty acid binding (ortholog); identical protein binding (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); glucose metabolic process (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955444 325515 329248 - 102007823 AGCD01038663;GBCE01001389;GBDK01231352;XM_013518222 XP_013373676 MODEL 8843090 pseudo LOC102011486 RNA-binding protein 4B pseudogene NW_004955446 4882192 4882609 - 102011486 AGCD01040049 MODEL 8985509 pseudo LOC102013131 caldesmon pseudogene NW_004955450 10594679 10597747 - 102013131 AGCD01042627 MODEL 9045232 protein-coding LOC102012716 PRAME family member 23-like NW_004955618 152655 161495 - 102012716 AGCD01077302;AGCD01077303;AGCD01077304;XM_013510148 XP_013365602 MODEL 8842841 protein-coding Ddx41 DEAD-box helicase 41 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cell population proliferation (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); aplastic anemia (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 29748091 29753610 - 102029480 AGCD01008770;GBCE01054904;XM_005376447 XP_005376504 MODEL 8808458 protein-coding Dhx9 DExH-box helicase 9 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 3'-5' DNA/RNA helicase activity (ortholog); 3'-5' RNA helicase activity (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to heat (ortholog); PARTICIPATES IN aldosterone signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant intellectual developmental disorder 75 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); CRD-mediated mRNA stability complex (ortholog) NW_004955406 21697813 21743551 + 102021089 AGCD01006141;AGCD01006142;GBDK01082941;XM_005375015;XM_005375016 XP_005375072;XP_005375073 MODEL 8911382 protein-coding Sat1 spermidine/spermine N1-acetyltransferase 1 ENCODES a protein that exhibits diamine N-acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); polyamine biosynthetic process (ortholog); polyamine catabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; polyamine metabolic pathway; spermidine metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); anxiety disorder (ortholog) NW_004955509 4198876 4202103 + 102015032 AGCD01066057;AGCD01066058;AY533231;GBCE01002359;XM_005407833;XM_013506302 AAS59433;XP_005407890;XP_013361756 MODEL 8796741 protein-coding Ttc13 tetratricopeptide repeat domain 13 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955492 7683353 7743066 + 102010376 AGCD01060802;GBCE01104916;XM_005404982;XM_005404984 XP_005405039;XP_005405041 MODEL 8818448 pseudo LOC102026081 zinc finger protein 23 pseudogene NW_004955460 9831900 9835067 - 102026081 AGCD01048556 MODEL 8792474 protein-coding Cibar2 CBY1 interacting BAR domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Crohn's disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955541 478437 486171 - 102016748 AGCD01071352;GBDK01011302;XM_005410971;XM_013507964 XP_005411028;XP_013363418 MODEL 8841646 protein-coding Rab5if RAB5 interacting factor INVOLVED IN mitochondrial respirasome assembly (ortholog); multi-pass transmembrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 2 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955422 25003195 25017380 - 102022094 AGCD01023239;AGCD01023240;GBDK01078344;XM_005384737 XP_005384794 MODEL 8816627 protein-coding Tm2d1 TM2 domain containing 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955423 27639192 27669907 + 102013517 AGCD01024136;GBCB01002952;XM_013514531 XP_013369985 MODEL 8765168 pseudo LOC102018885 histone H2A.Z pseudogene NW_004955452 16500190 16501449 + 102018885 AGCD01044514;XM_005395228;XM_005395229 MODEL 9052905 protein-coding E2f3 E2F transcription factor 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of fat cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955483 6039569 6116000 - 102015522 AGCD01057768;AGCD01057769;GBBH01045634;GBCB01101037;XM_005403385 XP_005403442 MODEL 8799229 protein-coding Arsk arylsulfatase family member K ENCODES a protein that exhibits arylsulfatase activity (ortholog); glucuronate-2-sulfatase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) NW_004955418 16959736 16989293 - 102016477 AGCD01019139;AGCD01019140;GBDJ01002127;XM_005382245 XP_005382302 MODEL 9065810 ncrna LOC102030007 uncharacterized LOC102030007 NW_004955555 2056043 2060272 - 102030007 AGCD01073126;GBDF01039219;XR_001232309;XR_264970 MODEL 39131625 rrna 5S_rRNA 5S ribosomal RNA 9038875 ncrna LOC102005710 uncharacterized LOC102005710 NW_004955418 22750893 22756659 + 102005710 AGCD01019292;XR_260582 MODEL 39133867 misc_rna 7SK 7SK RNA 8800610 protein-coding Cpox coproporphyrinogen oxidase ENCODES a protein that exhibits coproporphyrinogen oxidase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); heme biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Experimental Arthritis (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955427 152397 163570 - 102011341 AGCD01026808;AGCD01026809;GBCE01044947;GBCQ01096156;XM_005386600 XP_005386657 MODEL 8960938 protein-coding Bex2 brain expressed X-linked 2 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); INVOLVED IN axon development (ortholog); axon regeneration (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955548 439061 505418 - 102023748 AGCD01072332;AGCD01072333;GBCE01172021;XM_005411981;XM_005411982;XM_005411984;XM_005411985;XM_013508531 XP_005412038;XP_005412039;XP_005412041;XP_005412042;XP_013363985 MODEL 9015054 protein-coding Irf2 interferon regulatory factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of type I interferon production (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell junction (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955403 24433334 24517618 + 102005874 AGCD01002273;AGCD01002274;GBDI01079451;XM_005373488;XM_005373489;XM_005373492;XM_005373493;XM_005373494 XP_005373545;XP_005373546;XP_005373549;XP_005373550;XP_005373551 MODEL 8746584 protein-coding Fabp6 fatty acid binding protein 6 ENCODES a protein that exhibits fatty acid binding (ortholog); INVOLVED IN steroid metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955408 14102748 14111487 + 102024092 AGCD01008384;GBDF01007588;XM_005376256;XM_005376257 XP_005376313;XP_005376314 MODEL 9049722 protein-coding Fry FRY microtubule binding protein ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN negative regulation of tubulin deacetylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955431 13562116 13903335 - 102014476 AGCD01030310;AGCD01030311;AGCD01030312;GBBH01229563;XM_005387722;XM_005387724;XM_005387726;XM_005387727;XM_005387729;XM_013515820 XP_005387779;XP_005387781;XP_005387783;XP_005387784;XP_005387786;XP_013371274 MODEL 9009488 protein-coding Lta4h leukotriene A4 hydrolase ENCODES a protein that exhibits aminopeptidase activity (ortholog); epoxide hydrolase activity (ortholog); leukotriene-A4 hydrolase activity (ortholog); INVOLVED IN leukotriene biosynthetic process (ortholog); leukotriene metabolic process (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH otitis media; acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955405 32345005 32377685 - 102007852 AGCD01005333;AY462137;GBCQ01151674;NM_001282364 AAR26536;NP_001269293;Q6S9C8 PROVISIONAL 9014578 protein-coding LOC102005368 translation initiation factor IF-2-like NW_004955472 12291264 12293311 + 102005368 AGCD01053791;AGCD01053792;GBBH01193885;GBDJ01318455;XM_013523032 XP_013378486 MODEL 8998142 protein-coding Ptx3 pentraxin 3 ENCODES a protein that exhibits (1->3)-beta-D-glucan binding (ortholog); complement component C1q complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cystic fibrosis (ortholog); Diabetic Foot (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955448 8366795 8373010 + 102016862 AGCD01041442;AGCD01041443;GBBH01137479;GBCQ01115782;XM_013518628 XP_013374082 MODEL 8946897 protein-coding Enkur enkurin, TRPC channel interacting protein ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN establishment of left/right asymmetry (ortholog); flagellated sperm motility (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); acrosomal vesicle (ortholog) NW_004955429 4182507 4203275 + 102007452 AGCD01028483;GBDF01085329;XM_005386899;XM_005386900 XP_005386956;XP_005386957 MODEL 8811467 protein-coding Ddx42 DEAD-box helicase 42 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); regulation of apoptotic process (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cachexia (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955478 8009155 8052990 - 102021339 AGCD01056005;GBCE01076587;XM_005402189;XM_005402190 XP_005402246;XP_005402247 MODEL 9026361 protein-coding CUNH19orf25 chromosome unknown C19orf25 homolog ASSOCIATED WITH lung cancer (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955495 6461082 6464720 + 102030438 AGCD01062082;GBCE01169384;XM_005405964 XP_005406021 MODEL 10220365 protein-coding LOC106148622 putative POM121-like protein 1 NW_004955425 21963449 21964564 - 106148622 AGCD01025808;GBDI01105487;XM_013514775 XP_013370229 MODEL 8838468 protein-coding Rictor RPTOR independent companion of MTOR complex 2 ENCODES a protein that exhibits ATP binding (ortholog); enzyme-substrate adaptor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); embryo development ending in birth or egg hatching (ortholog); lipid biosynthetic process (ortholog); PARTICIPATES IN mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast ductal carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) NW_004955426 23468112 23582587 - 102020032 AGCD01026644;AGCD01026645;AGCD01026646;GBDJ01139466;XM_005386229;XM_005386232;XM_013514942;XM_013514943;XM_013514945;XM_013514946;XM_013514947;XM_013514948;XM_013514949 XP_005386286;XP_005386289;XP_013370396;XP_013370397;XP_013370399;XP_013370400;XP_013370401;XP_013370402;XP_013370403 MODEL 8991842 protein-coding Ccnl2 cyclin L2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); regulation of RNA splicing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cyclin L-CDK11 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); nuclear speck (ortholog) NW_004955486 9423491 9432811 + 102021453 AGCD01059185;GBDJ01079607;XM_005404222;XM_005404223;XM_005404224 XP_005404279;XP_005404280;XP_005404281 MODEL 8726625 pseudo LOC102006814 cysteine-rich PDZ-binding protein pseudogene NW_004955433 2469951 2470255 - 102006814 AGCD01031393 MODEL 9037741 protein-coding Ydjc YdjC chitooligosaccharide deacetylase homolog ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 17481581 17483858 + 102015669 AGCD01037955;GBDF01253063;XM_005391703 XP_005391760 MODEL 9035736 ncrna LOC102024275 uncharacterized LOC102024275 NW_004955540 1652575 1655151 - 102024275 AGCD01071306;GBDF01189067;XR_264819 MODEL 9035824 protein-coding Tm2d2 TM2 domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955463 14537902 14545147 - 102028728 AGCD01049912;GBCC01027748;XM_005398462;XR_001236652 XP_005398519 MODEL 39133395 snrna U4 U4 spliceosomal RNA 8707093 ncrna LOC102003597 uncharacterized LOC102003597 NW_004955447 15301309 15312329 + 102003597 AGCD01041045;GBDF01277712;XR_262434 MODEL 8789582 protein-coding Ppp2r5d protein phosphatase 2 regulatory subunit B'delta ENCODES a protein that exhibits protein phosphatase activator activity (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN negative regulation of peptidyl-threonine phosphorylation (ortholog); PARTICIPATES IN dopamine signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); allergic rhinitis (ortholog); amblyopia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955437 8968517 8987680 + 102029443 AGCD01034512;GBCE01097976;GBDF01120912;XM_005389743 XP_005389800 MODEL 8916007 ncrna LOC102009480 uncharacterized LOC102009480 NW_004955412 20745073 20752832 + 102009480 AGCD01013012;AGCD01013013;GBDF01262373;XR_001232926;XR_260006 MODEL 8710451 protein-coding Skic2 SKI2 subunit of superkiller complex ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process (ortholog); nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); nuclear-transcribed mRNA catabolic process, non-stop decay (ortholog); ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); Ski complex (ortholog) NW_004955437 473192 482811 + 102005746 AGCD01034137;GBDF01120948;XM_005389400 XP_005389457 MODEL 8753767 protein-coding Fabp7 fatty acid binding protein 7 INVOLVED IN cell proliferation in forebrain (ortholog); epithelial cell proliferation (ortholog); neurogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell body (ortholog); cell periphery (ortholog); cell-cell junction (ortholog) NW_004955436 4642584 4646172 + 102026039 AGCD01033670;GBCQ01037964;XM_005389151 XP_005389208 MODEL 8919008 protein-coding Rassf10 Ras association domain family member 10 INVOLVED IN positive regulation of neural precursor cell proliferation (ortholog); positive regulation of neurogenesis (ortholog); FOUND IN cytosol (ortholog) NW_004955414 28405024 28407734 + 102016260 AGCD01015681;GBBH01165129;XM_005380309 XP_005380366 MODEL 8700907 protein-coding LOC102003927 PRAME family member 20-like NW_004955615 78379 80979 - 102003927 AGCD01077249;XM_013510138 XP_013365592 MODEL 8875411 ncrna LOC102007976 uncharacterized LOC102007976 NW_004955465 144325 179094 + 102007976 AGCD01050304;GBDF01285865;XR_263226 MODEL 8769203 protein-coding Tatdn3 TatD DNase domain containing 3 ENCODES a protein that exhibits DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); single-stranded DNA 3'-5' DNA exonuclease activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 4741448 4764410 - 102019136 AGCD01005702;AGCD01005703;AGCD01005704;GBDI01353936;XM_005374737;XM_005374738 XP_005374794;XP_005374795 MODEL 8987961 protein-coding LOC102026085 zinc finger protein 655-like NW_004955460 15205776 15222996 + 102026085 AGCD01048771;AGCD01048772;GBDJ01187550;XM_013521181;XM_013521182;XM_013521183;XM_013521184;XM_013521185;XM_013521186;XM_013521188;XM_013521189;XM_013521190 XP_013376635;XP_013376636;XP_013376637;XP_013376638;XP_013376639;XP_013376640;XP_013376642;XP_013376643;XP_013376644 MODEL 39132503 snorna SNORA70 Small nucleolar RNA SNORA70 8912913 ncrna LOC102018892 uncharacterized LOC102018892 NW_004955455 1322663 1342562 + 102018892 AGCD01045573;AGCD01045574;GBDF01128397;XR_001236278;XR_001236279;XR_001236280;XR_001236281;XR_262813 MODEL 8842271 protein-coding Pop5 POP5 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); tRNA processing (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955455 11069131 11071814 + 102008497 AGCD01045978;GBCE01034142;XM_005396499 XP_005396556 MODEL 39133737 snorna SNORD97 Small nucleolar RNA SNORD97 8977005 protein-coding Slc25a41 solute carrier family 25 member 41 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); ATP transport (ortholog); mitochondrial ADP transmembrane transport (ortholog); ASSOCIATED WITH sarcoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955495 3175892 3182637 + 102013733 AGCD01061833;GBDF01010067;XM_005405722 XP_005405779 MODEL 8847713 ncrna LOC102025380 uncharacterized LOC102025380 NW_004955426 18639518 18643536 + 102025380 AGCD01026526;GBDF01114609;XR_261204 MODEL 9010383 protein-coding LOC102011487 olfactory receptor 2B6-like NW_004955576 1333991 1334947 + 102011487 AGCD01075372;XM_005413953 XP_005414010 MODEL 8976014 pseudo LOC102005715 60S ribosomal protein L7 pseudogene NW_004955487 5975491 5976261 + 102005715 AGCD01059350 MODEL 8752988 protein-coding LOC102013134 ataxin-2-like protein NW_004955451 14872121 14877579 - 102013134 AGCD01043579;AGCD01043580;GBCQ01028990;XM_005394359;XM_013519323;XM_013519324;XM_013519325 XP_005394416;XP_013374777;XP_013374778;XP_013374779 MODEL 39134419 misc_rna 7SK 7SK RNA 8742682 protein-coding Yeats2 YEATS domain containing 2 ENCODES a protein that exhibits histone binding (ortholog); histone reader activity (ortholog); modification-dependent protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN ATAC complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955420 23590636 23666689 - 102029974 AGCD01021249;AGCD01021250;AGCD01021251;GBDJ01062988;XM_005383359;XM_005383360;XM_005383361 XP_005383416;XP_005383417;XP_005383418 MODEL 8985070 protein-coding Bex3 brain expressed X-linked 3 ENCODES a protein that exhibits death receptor binding (ortholog); identical protein binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); glaucoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955548 526844 528406 + 102025517 AGCD01072333;GBCE01053102;XM_005411988;XM_005411989;XM_005411990;XM_005411991 XP_005412045;XP_005412046;XP_005412047;XP_005412048 MODEL 8732859 protein-coding Sat2 spermidine/spermine N1-acetyltransferase family member 2 ENCODES a protein that exhibits diamine N-acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN nor-spermidine metabolic process (ortholog); polyamine biosynthetic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway NW_004955467 9306210 9308668 + 102007640 AGCD01051494;GBDK01232568;XM_005399471;XM_013522147 XP_005399528;XP_013377601 MODEL 9040228 protein-coding Diablo diablo IAP-binding mitochondrial protein INVOLVED IN apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 64 (ortholog); brain ischemia (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955482 6354502 6364424 + 102007662 AGCD01057387;GBCE01031683;GBDK01080617;XM_005403097 XP_005403154 MODEL 8933749 protein-coding LOC102022220 olfactory receptor 2H2-like NW_004955524 284524 285456 - 102022220 AGCD01068674;XM_005409659 XP_005409716 MODEL 8727393 protein-coding Caps2 calcyphosine 2 INVOLVED IN brain-derived neurotrophic factor receptor signaling pathway (ortholog); cerebellum development (ortholog); dendrite development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN parallel fiber (ortholog); secretory vesicle (ortholog) NW_004955405 14658335 14761708 - 102008053 AGCD01004931;AGCD01004932;AGCD01004933;GBDI01163209;XM_005374329;XM_005374330;XM_005374331;XM_005374332;XM_013517679;XM_013517680;XM_013517683;XM_013517685;XM_013517689 XP_005374386;XP_005374387;XP_005374388;XP_005374389;XP_013373133;XP_013373134;XP_013373137;XP_013373139;XP_013373143 MODEL 8766008 protein-coding Cic capicua transcriptional repressor ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN brain development (ortholog); learning (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog) NW_004955555 613549 641587 - 102025847 AGCD01073039;AGCD01073040;GBCE01135171;XM_013508684;XM_013508685 XP_013364138;XP_013364139 MODEL 8713447 protein-coding Eif2b2 eukaryotic translation initiation factor 2B subunit beta ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN central nervous system development (ortholog); cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955523 553356 559376 - 102014819 AGCD01068464;GBDF01154329;XM_005409380 XP_005409437 MODEL 39131626 rrna 5S_rRNA 5S ribosomal RNA 8730781 protein-coding E2f4 E2F transcription factor 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); cell volume homeostasis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); lung cancer (ortholog); Lynch syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955484 9421396 9427826 - 102010488 AGCD01058415;GBDF01118876;XM_005403677;XM_013503914;XM_013503915 XP_005403734;XP_013359368;XP_013359369 MODEL 8948967 protein-coding Ddx43 DEAD-box helicase 43 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog) NW_004955493 8541937 8578199 + 102022093 AGCD01061309;AGCD01061310;AGCD01061311;AGCD01061312;AGCD01061313;AGCD01061314;GBCE01162665;GBDF01081346;XM_013504889;XM_013504890 XP_013360343;XP_013360344 MODEL 8701517 protein-coding LOC102030009 cytochrome c oxidase subunit 7B2, mitochondrial INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955443 1650087 1768318 + 102030009 AGCD01038139;AGCD01038140;AGCD01038141;AGCD01038142;AGCD01038143;GBDF01004752;XM_005391898;XM_005391899;XM_013518038 XP_005391955;XP_005391956;XP_013373492 MODEL 10306308 protein-coding LOC106148623 serine/arginine repetitive matrix protein 3-like NW_004955425 22686000 22689118 + 106148623 AGCD01025827;AGCD01025828;GBDF01048791;GBDF01048793;XM_013514777 XP_013370231 MODEL 39133868 misc_rna 7SK 7SK RNA 9003008 protein-coding LOC102010712 huntingtin-interacting protein M-like NW_004955503 3419013 3419370 - 102010712 AGCD01064627;GBDF01001006;GBDK01096844;XM_013505852 XP_013361306 MODEL 8751760 ncrna LOC102012718 uncharacterized LOC102012718 NW_004955403 26534439 26537509 + 102012718 AGCD01002308;GBCB01077504;XR_001233580;XR_259205 MODEL 9024714 pseudo LOC102006815 peroxiredoxin-1 pseudogene NW_004955434 1326675 1356641 - 102006815 AGCD01032061;AGCD01032062;AGCD01032063 MODEL 9029086 protein-coding LOC102024281 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like NW_004955439 14974380 14974592 + 102024281 AGCD01035995;XM_005390647 XP_005390704 MODEL 8767896 protein-coding Ccno cyclin O INVOLVED IN cilium assembly (ortholog); mitotic cell cycle (ortholog); multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Ciliary Motility Disorders (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) NW_004955446 12432889 12435435 + 102018997 AGCD01040231;GBDF01250799;XM_005392703 XP_005392760 MODEL 8991975 protein-coding Cpped1 calcineurin like phosphoesterase domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955442 5898055 6023384 + 102022637 AGCD01037573;AGCD01037574;AGCD01037575;AGCD01037576;AGCD01037577;GBDF01120047;XM_005391148 XP_005391205 MODEL 39133396 snrna U4 U4 spliceosomal RNA 8747759 protein-coding Ttc14 tetratricopeptide repeat domain 14 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955420 9677626 9687008 + 102017666 AGCD01020761;GBCE01001619;XM_005383061 XP_005383118 MODEL 8946276 ncrna LOC102005374 uncharacterized LOC102005374 NW_004955479 2013640 2022532 + 102005374 AGCD01056260;GBDF01098004;XR_263728 MODEL 8836724 pseudo LOC102006453 small ubiquitin-related modifier 2-like NW_004955476 1102626 1103054 - 102006453 AGCD01055200 MODEL 8827241 protein-coding Rab6a RAB6A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); early endosome to Golgi transport (ortholog); protein localization to Golgi apparatus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955414 17758071 17806727 + 102013278 AGCD01015251;AGCD01015252;AGCD01015253;AGCD01015254;AGCD01015255;GBDJ01023296;XM_005379939;XM_005379940 XP_005379996;XP_005379997 MODEL 8882421 protein-coding Ptx4 pentraxin 4 ASSOCIATED WITH uveal melanoma (ortholog) NW_004955442 15750881 15757906 + 102028804 AGCD01037878;GBDF01124152;XM_013517677;XM_013517678 XP_013373131;XP_013373132 MODEL 8855390 protein-coding Arsl arylsulfatase L ENCODES a protein that exhibits arylsulfatase activity (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); autism spectrum disorder (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955499 1751663 1773112 - 102012452 AGCD01063383;AGCD01063384;AGCD01063385;GBDK01092445;XM_005406523;XM_005406524 XP_005406580;XP_005406581 MODEL 39132193 rrna 5S_rRNA 5S ribosomal RNA 8819300 ncrna LOC102003928 uncharacterized LOC102003928 NW_004955403 24016583 24021309 + 102003928 AGCD01002266;GBDK01211102;XR_259201 MODEL 9001706 protein-coding Skic3 SKI3 subunit of superkiller complex INVOLVED IN nuclear-transcribed mRNA catabolic process (ortholog); nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955418 16989400 17068479 + 102016809 AGCD01019140;AGCD01019141;AGCD01019142;AGCD01019143;GBDF01158587;XM_005382246;XM_005382248 XP_005382303;XP_005382305 MODEL 9007780 protein-coding Rida reactive intermediate imine deaminase A ENCODES a protein that exhibits 2-iminobutanoate deaminase activity (ortholog); 2-iminopropanoate deaminase activity (ortholog); cation binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); kidney development (ortholog); lung development (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) NW_004955417 13810596 13822982 - 102010482 AGCD01018191;GBDJ01312104;XM_005381848 XP_005381905 MODEL 39132490 snorna SNORA70 Small nucleolar RNA SNORA70 39132936 snorna SNORD98 Small nucleolar RNA SNORD98 9047201 ncrna LOC102030012 uncharacterized LOC102030012 NW_004955445 1779168 1785321 - 102030012 AGCD01039345;GBDF01016603;XR_262293 MODEL 10067484 ncrna LOC106147532 uncharacterized LOC106147532 NW_004955574 325570 331331 + 106147532 AGCD01075098;GBBH01172280;XR_001232454;XR_001232455 MODEL 10242440 protein-coding LOC106148624 translation initiation factor IF-2-like NW_004955425 25385417 25391523 - 106148624 AGCD01025916;GBDF01040552;XM_013514779 XP_013370233 MODEL 8920420 ncrna LOC102012719 uncharacterized LOC102012719 NW_004955403 40191140 40192388 - 102012719 AGCD01002668;AGCD01002669;GBDF01211863;XR_259232 MODEL 8914700 protein-coding Ppp2r5e protein phosphatase 2 regulatory subunit B'epsilon ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Chromosomal Instability (ortholog); FOUND IN cytosol (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955466 6263338 6420685 + 102008518 AGCD01050923;AGCD01050924;AGCD01050925;AGCD01050926;AGCD01050927;GBDF01126130;XM_005399153;XM_005399154;XM_013521973 XP_005399210;XP_005399211;XP_013377427 MODEL 8843480 protein-coding Yeats4 YEATS domain containing 4 ENCODES a protein that exhibits histone H3K18ac reader activity (ortholog); histone H3K27ac reader activity (ortholog); INVOLVED IN gene expression (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955405 9677701 9706541 + 102024641 AGCD01004787;AGCD01004788;AGCD01004789;AGCD01004790;GBDI01290622;XM_005374299 XP_005374356 MODEL 8860481 protein-coding Satb1 SATB homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN activated T cell proliferation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); CD8-positive, alpha-beta T cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); nuclear body (ortholog) NW_004955430 10587539 10683887 - 102029889 AGCD01029438;AGCD01029439;AGCD01029440;GBDI01013807;XM_005387457;XM_005387458;XM_013515670;XM_013515671;XM_013515672 XP_005387514;XP_005387515;XP_013371124;XP_013371125;XP_013371126 MODEL 8774588 protein-coding CUNH19orf47 chromosome unknown C19orf47 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955578 905540 925570 + 102015359 AGCD01075500;AGCD01075501;AGCD01075502;GBCC01018259;XM_005414057;XM_005414058;XM_005414059;XM_005414061;XM_013509655;XM_013509656;XM_013509657 XP_005414114;XP_005414115;XP_005414116;XP_005414118;XP_013365109;XP_013365110;XP_013365111 MODEL 8840618 protein-coding Fabp9 fatty acid binding protein 9 INVOLVED IN acrosome assembly (ortholog); FOUND IN acrosomal vesicle (ortholog); perinuclear theca (ortholog) NW_004955444 151003 153775 + 102007477 AGCD01038652;GBCQ01015779;GBCQ01015780;XM_013518147 XP_013373601 MODEL 8738738 ncrna LOC102026093 uncharacterized LOC102026093 NW_004955413 1319222 1323485 - 102026093 AGCD01013519;AGCD01013520;XR_001232933;XR_001232934;XR_260047 MODEL 8750318 protein-coding Tax1bp1 Tax1 binding protein 1 ENCODES a protein that exhibits kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); phagophore assembly site (ortholog) NW_004955410 29366295 29445205 + 102009586 AGCD01011290;AGCD01011291;AGCD01011292;GBDI01008216;XM_005377466;XM_005377467;XM_013510614 XP_005377523;XP_005377524;XP_013366068 MODEL 9042475 protein-coding Tm2d3 TM2 domain containing 3 INVOLVED IN lateral inhibition (ortholog); Notch receptor processing, ligand-independent (ortholog); positive regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); frontotemporal dementia (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955416 28499077 28507907 - 102011764 AGCD01017630;GBDK01009358;XM_005381648 XP_005381705 MODEL 9043870 protein-coding Pop7 POP7 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog) NW_004955573 217809 218915 - 102014095 AGCD01074968;GBDJ01353728;XM_005413692;XM_005413693 XP_005413749;XP_005413750 MODEL 8940666 pseudo LOC102003598 SRSF protein kinase 1 pseudogene NW_004955447 5510865 5512873 + 102003598 AGCD01040759 MODEL 8891771 protein-coding Irf2bp1 interferon regulatory factor 2 binding protein 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); protein polyubiquitination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955574 309506 311759 - 102023208 AGCD01075098;GBCE01097248;XM_005413820 XP_005413877 MODEL 8870257 protein-coding Slc25a42 solute carrier family 25 member 42 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); ADP transmembrane transporter activity (ortholog); AMP transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); AMP transport (ortholog); ATP transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); colorectal cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955524 2674508 2683304 - 102007050 AGCD01068828;GBCB01022455;XM_005409612;XM_005409613;XM_013507218;XM_013507219 XP_005409669;XP_005409670;XP_013362672;XP_013362673 MODEL 8999395 pseudo LOC102006818 protein SET-like NW_004955436 20911043 20912325 + 102006818 AGCD01034043 MODEL 8980275 protein-coding Fryl FRY like transcription coactivator ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955447 18916371 19182736 + 102022867 AGCD01041198;AGCD01041199;AGCD01041200;AGCD01041201;AGCD01041202;AGCD01041203;AGCD01041204;GBDF01122046;XM_005392935;XM_005392936;XM_005392937;XM_005392938;XM_005392939;XM_005392940;XM_013518515;XM_013518516 XP_005392992;XP_005392993;XP_005392994;XP_005392995;XP_005392996;XP_005392997;XP_013373969;XP_013373970 MODEL 8996811 pseudo LOC102024282 protein slowmo homolog 2 pseudogene NW_004955439 11396392 11398794 + 102024282 AGCD01035905;AGCD01035906 MODEL 9013369 protein-coding LOC102013135 upstream-binding factor 1-like protein 1 NW_004958190 17 1019 - 102013135 AGCD01081586;GBDF01014529;GBDF01014530;XM_005415239 XP_005415296 MODEL 8959268 protein-coding Rassf2 Ras association domain family member 2 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN bone remodeling (ortholog); canonical NF-kappaB signal transduction (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955415 15500726 15542939 - 102008844 AGCD01016346;AGCD01016347;AGCD01016348;AGCD01016349;GBDI01218507;XM_005380820;XM_013512321;XM_013512322;XM_013512323;XM_013512324;XM_013512325;XM_013512326 XP_005380877;XP_013367775;XP_013367776;XP_013367777;XP_013367778;XP_013367779;XP_013367780 MODEL 9005430 protein-coding Diaph1 diaphanous related formin 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); actin nucleation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autoimmune hemolytic anemia (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) NW_004955415 12156152 12272961 + 102007112 AGCD01016185;AGCD01016186;AGCD01016187;GBCQ01066059;XM_005380730;XM_005380731;XM_013512217;XM_013512218 XP_005380787;XP_005380788;XP_013367671;XP_013367672 MODEL 8888817 protein-coding Capsl calcyphosine like INVOLVED IN angiogenesis (ortholog); endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); exudative vitreoretinopathy (ortholog) NW_004955426 20833508 20862356 - 102010285 AGCD01026575;GBCE01097061;XM_005386203;XM_013515010 XP_005386260;XP_013370464 MODEL 9002255 protein-coding LOC102007981 translation initiation factor IF-2-like NW_004955413 24038776 24042868 - 102007981 AGCD01014345;GBDI01226162;XM_005379216 XP_005379273 MODEL 8805575 ncrna LOC102005378 uncharacterized LOC102005378 NW_004955418 11451076 11451817 - 102005378 AGCD01019004;GBDF01090330;XR_260556 MODEL 8745531 protein-coding Cidea cell death inducing DFFA like effector a ENCODES a protein that exhibits lipid transfer activity (ortholog); phosphatidic acid binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cold (ortholog); fat cell differentiation (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); congestive heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); mitochondrial envelope (ortholog) NW_004955402 1090372 1096621 - 102011492 AGCD01000047;GBCB01087694;GBDI01064477;XM_005373138 XP_005373195 MODEL 8908482 pseudo LOC102018893 putative dimethylaniline monooxygenase [N-oxide-forming] 6 NW_004955406 11808291 11826736 + 102018893 AGCD01005896;XM_005375459 MODEL 39132196 rrna 5S_rRNA 5S ribosomal RNA 8773680 ncrna LOC102025381 uncharacterized LOC102025381 NW_004955506 3658763 3660305 + 102025381 AGCD01065318;GBDF01155637;XR_001231606;XR_264341;XR_264342 MODEL 9062087 protein-coding Eif2b3 eukaryotic translation initiation factor 2B subunit gamma ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); oligodendrocyte development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955464 13254228 13378832 + 102006109 AGCD01050265;AGCD01050266;AGCD01050267;AGCD01050268;AGCD01050269;AGCD01050270;AGCD01050271;AGCD01050272;AGCD01050273;AGCD01050274;GBDF01071578;XM_005398721;XM_005398723;XM_005398724 XP_005398778;XP_005398780;XP_005398781 MODEL 8705104 ncrna LOC102011493 uncharacterized LOC102011493 NW_004955403 2475409 2479214 + 102011493 AGCD01001736;GBDF01280925;XR_001234362 MODEL 8880017 ncrna LOC102026094 uncharacterized LOC102026094 NW_004955413 6676261 6678841 + 102026094 AGCD01013768;AGCD01013769;GBDF01046613;XR_001233022 MODEL 9062004 protein-coding Ddx46 DEAD-box helicase 46 INVOLVED IN mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear speck (ortholog); U2-type spliceosomal complex (ortholog) NW_004955408 29981509 30031473 + 102006001 AGCD01008791;AGCD01008792;GBDF01118769;XM_005376463;XM_005376464;XM_005376465 XP_005376520;XP_005376521;XP_005376522 MODEL 8737534 pseudo LOC102009482 growth hormone-inducible transmembrane protein pseudogene NW_004955466 13355054 13356148 - 102009482 AGCD01051156 MODEL 8765715 protein-coding CUNH19orf67 chromosome unknown C19orf67 homolog INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955415 32785472 32789328 - 102010998 AGCD01016733;GBDF01089684;XM_005381086 XP_005381143 MODEL 9030090 protein-coding Rif1 replication timing regulatory factor 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA damage response (ortholog); negative regulation of double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955440 16977710 17047809 + 102019327 AGCD01036555;AGCD01036556;AGCD01036557;AGCD01036558;GBDF01086865;XM_013517488 XP_013372942 MODEL 39132628 snorna SNORA70 Small nucleolar RNA SNORA70 39133399 snrna U4 U4 spliceosomal RNA 8858368 pseudo LOC102030016 protein kish-A pseudogene NW_004955447 4556230 4558670 - 102030016 AGCD01040723 MODEL 8993034 protein-coding Popdc1 popeye domain cAMP effector 1 ENCODES a protein that exhibits cAMP binding (ortholog); structural molecule activity (ortholog); INVOLVED IN cell migration involved in heart development (ortholog); epithelial cell-cell adhesion (ortholog); heart development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2X (ortholog); genetic disease (ortholog); limb-girdle muscular dystrophy (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell junction (ortholog) NW_004955411 30517917 30548424 - 102030054 AGCD01012257;AGCD01012258;GBCB01000928;GBDF01087341;XM_013510787 XP_013366241 MODEL 8803642 protein-coding Bfar bifunctional apoptosis regulator ENCODES a protein that exhibits caspase binding (ortholog); protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of IRE1-mediated unfolded protein response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955442 4229236 4255623 - 102016103 AGCD01037524;AGCD01037525;GBBH01140244;XM_005391133 XP_005391190 MODEL 8917388 pseudo LOC102006459 protein lin-7 homolog A-like NW_004955418 22883973 22884992 - 102006459 AGCD01019293 MODEL 8879203 protein-coding Ttc16 tetratricopeptide repeat domain 16 ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955419 926561 940368 - 102028539 AGCD01019623;AGCD01019624;GBCE01008925;XM_005382418;XM_013513206;XM_013513208;XM_013513209;XM_013513210;XM_013513211;XM_013513212 XP_005382475;XP_013368660;XP_013368662;XP_013368663;XP_013368664;XP_013368665;XP_013368666 MODEL 8839333 ncrna LOC102024285 uncharacterized LOC102024285 NW_004955441 15676243 15697570 + 102024285 AGCD01037251;GBCB01089296;XR_001235297;XR_262085;XR_262086;XR_262087 MODEL 9012187 protein-coding Rab6b RAB6B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); myosin V binding (ortholog); INVOLVED IN Golgi organization (ortholog); protein localization to Golgi membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955501 4751647 4781094 + 102026339 AGCD01064144;GBBH01065558;GBCQ01069711;XM_013505801 XP_013361255 MODEL 9043215 protein-coding Pudp pseudouridine 5'-phosphatase ENCODES a protein that exhibits pseudouridine 5'-phosphatase activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955499 5110297 5181487 - 102017474 AGCD01063508;AGCD01063509;GBDI01066523;XM_005406540 XP_005406597 MODEL 8761047 ncrna LOC102003929 uncharacterized LOC102003929 NW_004955758 2514 8463 + 102003929 AGCD01078291;GBCB01086463;XR_001232596;XR_001232597 MODEL 8972985 protein-coding Art1 ADP-ribosyltransferase 1 ENCODES a protein that exhibits NAD+ poly-ADP-ribosyltransferase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); uveal melanoma (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) NW_004955414 19465969 19487859 + 102007540 AGCD01015318;AGCD01015319;AGCD01015320;AGCD01081640;GBCB01020800;XM_005380024;XM_005380025 XP_005380081;XP_005380082 MODEL 39133869 misc_rna 7SK 7SK RNA 8932229 ncrna LOC102005716 uncharacterized LOC102005716 NW_004955421 23197095 23198981 + 102005716 AGCD01022174;GBCB01036865;XR_260820 MODEL 8780782 pseudo LOC102010717 probable ATP-dependent RNA helicase DDX41 NW_004955428 2954658 3061479 + 102010717 AGCD01027644;AGCD01027645;AGCD01027646;AGCD01027647;AGCD01027648 MODEL 8715733 protein-coding Yes1 YES proto-oncogene 1, Src family tyrosine kinase ENCODES a protein that exhibits enzyme binding (ortholog); epidermal growth factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN cellular response to platelet-derived growth factor stimulus (ortholog); cellular response to retinoic acid (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin filament (ortholog); anchoring junction (ortholog); cell junction (ortholog) NW_004955402 9199704 9255183 + 102021819 AGCD01000209;AGCD01000210;AGCD01000211;GBDF01249763;XM_005372669 XP_005372726 MODEL 39134424 misc_rna 7SK 7SK RNA 8896389 protein-coding Skic8 SKI8 subunit of superkiller complex INVOLVED IN negative regulation of myeloid cell differentiation (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 771646 788895 - 102008797 AGCD01042344;GBCE01077094;XM_005393443;XM_005393444 XP_005393500;XP_005393501 MODEL 8896197 protein-coding Ccnp cyclin P ASSOCIATED WITH lung cancer (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN nucleus (ortholog) NW_004955578 1009159 1013368 + 102026489 AGCD01075504;GBDI01374425;XM_005414093 XP_005414150 MODEL 8759711 protein-coding Ltap1 lipid transport auxiliary protein 1 INVOLVED IN phagocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog); Golgi apparatus (ortholog) NW_004955545 760857 767801 - 102008353 AGCD01071817;GBCQ01003944;XM_005411507;XM_005411508 XP_005411564;XP_005411565 MODEL 39133363 snorna SNORD99 Small nucleolar RNA SNORD99 8869407 protein-coding Cpq carboxypeptidase Q ENCODES a protein that exhibits metallodipeptidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN peptide catabolic process (ortholog); proteolysis (ortholog); thyroid hormone generation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); ovarian cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955417 12585829 13020935 + 102006661 AGCD01018162;AGCD01018163;AGCD01018164;AGCD01018165;AGCD01018166;AGCD01018167;AGCD01018168;AGCD01018169;AGCD01018170;AGCD01018171;GBBH01063334;XM_005381836;XM_005381837 XP_005381893;XP_005381894 MODEL 10386944 ncrna LOC106147533 uncharacterized LOC106147533 NW_004955575 629172 630354 + 106147533 AGCD01075227;GBDI01251521;XR_001232456 MODEL 10247333 protein-coding LOC106148625 uncharacterized LOC106148625 NW_004955425 27128679 27155699 - 106148625 AGCD01025960;AGCD01025961;AGCD01025962;AGCD01025963;GBCE01083639;XM_013514781 XP_013370235 MODEL 8842401 ncrna LOC102009483 uncharacterized LOC102009483 NW_004955412 27560591 27578228 + 102009483 AGCD01013240;AGCD01013241;GBDK01345407;XR_260029 MODEL 8733730 protein-coding Slc25a43 solute carrier family 25 member 43 ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955534 513757 548027 - 102012576 AGCD01070456;GBCQ01100708;XM_005410446 XP_005410503 MODEL 8945134 pseudo LOC102012720 translationally-controlled tumor protein pseudogene NW_004955403 40178459 40178980 - 102012720 AGCD01002666 MODEL 8732083 ncrna LOC102006819 uncharacterized LOC102006819 NW_004955532 2185792 2187582 + 102006819 AGCD01070222;GBCQ01093416;XR_001232007;XR_001232008;XR_001232009 MODEL 39131627 rrna 5S_rRNA 5S ribosomal RNA 39133401 snrna U4 U4 spliceosomal RNA 9037520 protein-coding Satb2 SATB homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cartilage development (ortholog); chromatin remodeling (ortholog); embryonic pattern specification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anisometropia (ortholog); Arthralgia (ortholog); FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 1663676 1811088 + 102010009 AGCD01001724;AGCD01001725;GBCE01064967;XM_013511972 XP_013367426 MODEL 8789110 protein-coding Capza1 capping actin protein of muscle Z-line subunit alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); cell junction assembly (ortholog); dynein-driven meiotic oscillatory nuclear movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN brush border (ortholog); cell-cell junction (ortholog); cortical cytoskeleton (ortholog) NW_004955435 16048213 16087814 + 102004636 AGCD01033293;GBDF01080954;XM_005388962;XM_013516421 XP_005389019;XP_013371875 MODEL 8835000 protein-coding Eno1 enolase 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); GTPase binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955486 4275371 4287152 + 102025912 AGCD01059057;GBDF01006171;XM_005404048;XM_005404051 XP_005404105;XP_005404108 MODEL 39132197 rrna 5S_rRNA 5S ribosomal RNA 8865178 protein-coding Tm4sf1 transmembrane 4 L six family member 1 INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955448 608724 617189 - 102019652 AGCD01041235;GBBH01034830;XM_005392998 XP_005393055 MODEL 8783948 protein-coding Irf2bp2 interferon regulatory factor 2 binding protein 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN immature B cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); anxiety disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955492 4889878 4895508 - 102024244 AGCD01060734;AGCD01060735;GBBH01002287;GBCQ01073372;XM_005405019 XP_005405076 MODEL 9055475 protein-coding Eif2b4 eukaryotic translation initiation factor 2B subunit delta ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); myelination (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Leukoencephalopathies (ortholog); leukoencephalopathy with vanishing white matter (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955469 9328900 9334463 - 102030410 AGCD01052498;GBBH01089100;XM_005400493;XM_005400495;XM_005400497 XP_005400550;XP_005400552;XP_005400554 MODEL 8830585 protein-coding Art3 ADP-ribosyltransferase 3 (inactive) ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955433 743631 850612 + 102009534 AGCD01031336;AGCD01031337;AGCD01031338;AGCD01031339;GBDF01010282;XM_005388166;XM_005388167;XM_005388168;XM_005388169;XM_005388170;XM_005388171;XM_005388172;XM_005388173;XM_005388174;XM_005388175;XM_005388176;XM_005388177;XM_013516261;XM_013516262;XM_013516263;XM_013516264;XM_013516265 XP_005388223;XP_005388224;XP_005388225;XP_005388226;XP_005388227;XP_005388228;XP_005388229;XP_005388230;XP_005388231;XP_005388232;XP_005388233;XP_005388234;XP_013371715;XP_013371716;XP_013371717;XP_013371718;XP_013371719 MODEL 8913437 ncrna LOC102013141 uncharacterized LOC102013141 NW_004955405 33232205 33299557 + 102013141 AGCD01005354;AGCD01005355;GBDF01178491;XR_001235744 MODEL 8920227 protein-coding E2f5 E2F transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 3131282 3155872 + 102003545 AGCD01017904;AGCD01017905;GBCE01129791;XM_005381740 XP_005381797 MODEL 8790979 pseudo LOC102030018 dnaJ homolog subfamily B member 14 pseudogene NW_004955581 1150307 1151075 + 102030018 AGCD01075715 MODEL 8844765 protein-coding LOC102007982 cytochrome P450 2D17-like NW_004955413 27521610 27655636 - 102007982 AGCD01014511;AGCD01014512;AGCD01014513;AGCD01014514;AGCD01014515;AGCD01014516;AGCD01014517;AGCD01014518;AGCD01014519;AGCD01014520;AGCD01014521;AGCD01014522;AGCD01014523;AGCD01014524;AGCD01014525;AGCD01014526;AGCD01014527;AGCD01014528;AGCD01014529;GBDI01255784;XM_013511457;XM_013511458;XM_013511459;XR_001232980 XP_013366911;XP_013366912;XP_013366913 MODEL 8831553 protein-coding Fadd Fas associated via death domain ENCODES a protein that exhibits caspase binding (ortholog); death effector domain binding (ortholog); death receptor binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); behavioral response to cocaine (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN caspase complex (ortholog); CD95 death-inducing signaling complex (ortholog); cell body (ortholog) NW_004955422 16026323 16035808 - 102021355 AGCD01022888;GBCE01065224;XM_005384238 XP_005384295 MODEL 8915618 protein-coding LOC102018897 uncharacterized LOC102018897 NW_004955458 9971865 9973728 + 102018897 AGCD01047669;GBDF01150755;XM_005397436 XP_005397493 MODEL 8867831 protein-coding Cideb cell death inducing DFFA like effector b ENCODES a protein that exhibits identical protein binding (ortholog); lipid transfer activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); COPII-coated vesicle cargo loading (ortholog); execution phase of apoptosis (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955409 35993853 35996935 + 102004249 AGCD01010438;GBCQ01012226;XM_005377019 XP_005377076 MODEL 8824296 protein-coding Rab7a RAB7A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); bone resorption (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN autophagy pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 2B (ortholog); genetic disease (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955429 15103792 15167498 - 102021694 AGCD01028794;AGCD01028795;AGCD01028796;GBBH01004537;XM_013515507 XP_013370961 MODEL 8758566 pseudo LOC102022224 melanoma-associated antigen B3-like NW_004955531 872687 874486 - 102022224 AGCD01070016 MODEL 8904745 protein-coding Tax1bp3 Tax1 binding protein 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleus (ortholog) NW_004955467 13146527 13151109 + 102022271 AGCD01051667;GBDF01120348;XM_005399723 XP_005399780 MODEL 8733726 protein-coding LOC102011496 RAD52 motif-containing protein 1-like NW_004957952 76 531 + 102011496 AGCD01081348;GBDJ01230466;GBDJ01230469;XM_005415236 XP_005415293 MODEL 8994573 ncrna LOC102026096 uncharacterized LOC102026096 NW_004955413 27267143 27271663 - 102026096 AGCD01014500;GBDF01083501;XR_001232991 MODEL 8861275 pseudo LOC102003599 ubiquitin-like protein ATG12 pseudogene NW_004955448 10940263 10942006 + 102003599 AGCD01041506 MODEL 9066760 pseudo LOC102025386 spindlin-1 pseudogene NW_004955433 5076994 5077704 + 102025386 AGCD01031489 MODEL 39134425 misc_rna 7SK 7SK RNA 8925038 protein-coding Ddx47 DEAD-box helicase 47 INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); RNA splicing (ortholog); rRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955413 9703777 9718802 + 102019492 AGCD01013910;GBDK01136315;XM_005378972 XP_005379029 MODEL 8719444 protein-coding Skida1 SKI/DACH domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955429 7181234 7187309 + 102018422 AGCD01028583;AGCD01028584;GBDJ01303835;XM_013515352 XP_013370806 MODEL 8765934 protein-coding Ppp3ca protein phosphatase 3 catalytic subunit alpha ENCODES a protein that exhibits ATPase binding (ortholog); calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcineurin-mediated signaling (ortholog); calcineurin-NFAT signaling cascade (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Arthrogryposis, Cleft Palate, Craniosynostosis, and Impaired Intellectual Development (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955496 6934542 7059745 + 102019410 AGCD01062372;GBCB01004825;GBCQ01066605;XM_013505393 XP_013360847 MODEL 39131734 snorna SNORA70 Small nucleolar RNA SNORA70 8943885 protein-coding Frzb frizzled related protein ENCODES a protein that exhibits Wnt-protein binding (ortholog); INVOLVED IN cochlea morphogenesis (ortholog); convergent extension involved in organogenesis (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 14598765 14627997 + 102029355 AGCD01002028;AGCD01002029;GBCB01001221;XM_013512467 XP_013367921 MODEL 8783453 pseudo LOC102006463 targeting protein for Xklp2 pseudogene NW_004955484 7904220 7935632 - 102006463 AGCD01058355;AGCD01058356;AGCD01058357;AGCD01058358;AGCD01058359 MODEL 8749689 protein-coding Rassf3 Ras association domain family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955458 11400655 11451796 + 102008825 AGCD01047749;AGCD01047750;GBBH01209336;GBDI01147576;XM_005397534 XP_005397591 MODEL 8914346 protein-coding Popdc2 popeye domain cAMP effector 2 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN regulation of heart rate (ortholog); regulation of membrane potential (ortholog); sinoatrial node cell development (ortholog); ASSOCIATED WITH Cardiac Conduction Disease with or without Dilated Cardiomyopathy 2 (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN membrane (ortholog); sarcolemma (ortholog) NW_004955427 19347880 19367759 - 102020590 AGCD01027365;GBCB01073022;XM_005386452;XM_005386453;XM_013515175 XP_005386509;XP_005386510;XP_013370629 MODEL 8726064 protein-coding Bfsp1 beaded filament structural protein 1 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN cell maturation (ortholog); intermediate filament organization (ortholog); lens fiber cell development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cataract 33 (ortholog); coloboma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intermediate filament (ortholog) NW_004955415 26507381 26535545 - 102009495 AGCD01016596;AGCD01016597;AGCD01016598;GBCE01168540;XM_005380906;XM_013512110 XP_005380963;XP_013367564 MODEL 8811866 ncrna LOC102005384 uncharacterized LOC102005384 NW_004955488 8933146 8961329 - 102005384 AGCD01059736;AGCD01059737;AGCD01059738;AGCD01059739;GBDF01190452;XR_264007 MODEL 8801714 protein-coding Cps1 carbamoyl-phosphate synthase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); carbamoyl-phosphate synthase (ammonia) activity (ortholog); INVOLVED IN carbamoyl phosphate biosynthetic process (ortholog); cellular response to ammonium ion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Acidoses (ortholog); alcohol-associated liver disease (ortholog); Animal Hepatitis (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial nucleoid (ortholog) NW_004955457 4848116 4961384 - 102027719 AGCD01046798;AGCD01046799;AGCD01046800;AGCD01046801;AGCD01046802;GBCQ01186219;XM_005396941 XP_005396998 MODEL 8982294 pseudo LOC102006824 sorting nexin-2 pseudogene NW_004955439 2480520 2482408 - 102006824 AGCD01035651 MODEL 8907890 protein-coding Slc25a44 solute carrier family 25 member 44 ENCODES a protein that exhibits branched-chain amino acid transmembrane transporter activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); branched-chain amino acid transport (ortholog); regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955545 2347951 2364935 + 102023077 AGCD01071897;AGCD01071898;GBBH01172218;XM_005411661;XM_013508274 XP_005411718;XP_013363728 MODEL 8736914 protein-coding Diaph2 diaphanous related formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); axon midline choice point recognition (ortholog); ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955503 2324934 3132466 + 102018747 AGCD01064606;AGCD01064607;AGCD01064608;AGCD01064609;AGCD01064610;AGCD01064611;AGCD01064612;AGCD01064613;AGCD01064614;AGCD01064615;AGCD01064616;AGCD01064617;AGCD01064618;GBDI01105959;XM_013505853;XM_013505854 XP_013361307;XP_013361308 MODEL 39133403 snrna U4 U4 spliceosomal RNA 8753734 protein-coding Ttc17 tetratricopeptide repeat domain 17 INVOLVED IN actin filament polymerization (ortholog); cilium organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955422 4019755 4119522 - 102026014 AGCD01022532;AGCD01022533;GBBH01188438;XM_005384085;XM_005384087;XM_013514117;XM_013514118;XM_013514119;XM_013514120;XM_013514121;XM_013514122 XP_005384142;XP_005384144;XP_013369571;XP_013369572;XP_013369573;XP_013369574;XP_013369575;XP_013369576 MODEL 39133870 misc_rna 7SK 7SK RNA 8720025 protein-coding Puf60 poly(U) binding splicing factor 60 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH alopecia (ortholog); amblyopia (ortholog); anisometropia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955454 2482968 2497339 - 102014866 AGCD01045022;GBDK01022705;XM_005395816;XM_005395817;XM_005395818;XM_013520058;XM_013520059;XM_013520060 XP_005395873;XP_005395874;XP_005395875;XP_013375512;XP_013375513;XP_013375514 MODEL 9008631 pseudo LOC102005717 hippocampus abundant transcript 1 protein pseudogene NW_004955490 4529263 4530710 - 102005717 AGCD01060188 MODEL 8735895 protein-coding Sav1 salvador family WW domain containing protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activator activity (ortholog); transcription regulator activator activity (ortholog); INVOLVED IN hair follicle development (ortholog); hippo signaling (ortholog); intestinal epithelial cell differentiation (ortholog); ASSOCIATED WITH colonic disease (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955409 12200721 12221520 + 102021738 AGCD01009541;GBCE01118906;GBDK01129269;XM_005376820 XP_005376877 MODEL 8943343 protein-coding Yif1a Yip1 interacting factor homolog A, membrane trafficking protein ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955422 19028871 19032850 + 102016065 AGCD01022972;GBDF01046174;XM_005384420;XM_005384421 XP_005384477;XP_005384478 MODEL 8836306 protein-coding Ltb lymphotoxin beta INVOLVED IN gene expression (ortholog); lymph node development (ortholog); positive regulation of interleukin-12 production (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); cutaneous leishmaniasis (ortholog); disease of cellular proliferation (ortholog); FOUND IN plasma membrane (ortholog); tumor necrosis factor receptor superfamily complex (ortholog) NW_004955437 120966 123973 - 102013209 AGCD01034101;AGCD01034102;GBBH01089970;GBDJ01064428;XM_013516928 XP_013372382 MODEL 150537115 snorna SNORND104 Small nucleolar RNA SNORD104 8739573 protein-coding CUNH19orf81 chromosome unknown C19orf81 homolog NW_004955559 566878 575429 - 102015780 AGCD01073594;GBDF01050500;XM_005412774;XM_013508936 XP_005412831;XP_013364390 MODEL 8943620 protein-coding Eno2 enolase 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); phosphopyruvate hydratase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); multicellular organismal reproductive process (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Atrophy (ortholog); brain disease (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955413 4498625 4506769 + 102006232 AGCD01013620;GBBH01088486;GBDF01119626;XM_005378839 XP_005378896 MODEL 9064279 protein-coding Irf2bpl interferon regulatory factor 2 binding protein like ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN development of animal secondary female sexual characteristics (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); ASSOCIATED WITH Ataxia (ortholog); atrial fibrillation (ortholog); autism spectrum disorder (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 946044 949315 - 102006610 AGCD01034965;GBDK01005190;XM_013517171 XP_013372625 MODEL 8705466 pseudo LOC102024286 olfactory receptor 11G2-like NW_004955550 750775 751537 + 102024286 AGCD01072520 MODEL 39131628 rrna 5S_rRNA 5S ribosomal RNA 8969422 protein-coding LOC102013142 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like NW_004955405 484163 518839 - 102013142 AGCD01004563;AGCD01004564;AGCD01004565;AGCD01004566;AGCD01004567;GBBH01035630;XM_013517294 XP_013372748 MODEL 8952419 protein-coding Skil SKI like proto-oncogene ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN blastocyst formation (ortholog); lens fiber cell differentiation (ortholog); lymphocyte homeostasis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955420 530531 554308 + 102020343 AGCD01020545;GBDI01355390;GBDJ01349393;XM_005382979 XP_005383036 MODEL 9000861 pseudo LOC102010721 TRMT1-like protein pseudogene NW_004955431 1011390 1013166 - 102010721 AGCD01029888 MODEL 9062278 protein-coding Capza2 capping actin protein of muscle Z-line subunit alpha 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN brush border (ortholog); cortical cytoskeleton (ortholog); F-actin capping protein complex (ortholog) NW_004955432 22595169 22625363 + 102013441 AGCD01031263;GBDJ01075806;XM_013515922 XP_013371376 MODEL 8753689 protein-coding Cidec cell death inducing DFFA like effector c ENCODES a protein that exhibits lipid transfer activity (ortholog); molecular condensate scaffold activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN apoptotic process (ortholog); execution phase of apoptosis (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 5 (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955561 1363907 1376144 - 102023081 AGCD01073851;AGCD01073852;AGCD01073853;GBDJ01009118;XM_013509089;XM_013509090;XM_013509091 XP_013364543;XP_013364544;XP_013364545 MODEL 9027260 protein-coding Ccnq cyclin Q ENCODES a protein that exhibits protein kinase activator activity (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); regulation of cell cycle G2/M phase transition (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955580 336681 349435 - 102012381 AGCD01075596;AGCD01075597;GBDJ01228737;XM_005414126;XM_005414127;XM_005414128 XP_005414183;XP_005414184;XP_005414185 MODEL 10300641 protein-coding Fads1 fatty acid desaturase 1 ENCODES a protein that exhibits acyl-CoA (8-3)-desaturase activity (ortholog); acyl-CoA 6-desaturase activity (ortholog); omega-6 fatty acid desaturase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cellular response to starvation (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955511 5908394 5915764 + 106146259 AGCD01066592;GBBH01034296;GBDJ01124691;XM_013506431 XP_013361885 MODEL 39132199 rrna 5S_rRNA 5S ribosomal RNA 9031796 pseudo LOC102011501 60S ribosomal protein L9 pseudogene NW_004955406 3129354 3129909 + 102011501 AGCD01005665 MODEL 8716520 protein-coding LOC102003601 EKC/KEOPS complex subunit LAGE3-like NW_004955585 4764 6040 + 102003601 AGCD01075987;XM_005414426 XP_005414483 MODEL 10244354 ncrna LOC106147534 uncharacterized LOC106147534 NW_004955575 153913 162288 - 106147534 AGCD01075204;AGCD01075205;GBDK01152282;XR_001232457;XR_001232458 MODEL 8702509 protein-coding Rigi RNA sensor RIG-I ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955472 3093895 3135524 + 102017119 AGCD01053503;AGCD01053504;GBBH01063676;XM_013522945 XP_013378399 MODEL 8877137 pseudo LOC102009484 signal peptide peptidase-like 3 pseudogene NW_004955412 33749516 33760698 + 102009484 AGCD01013370 MODEL 8907091 ncrna LOC102012723 uncharacterized LOC102012723 NW_004955452 3278140 3282430 + 102012723 AGCD01043918;GBDF01194364;XR_262644 MODEL 730469011 snorna SNORND104 Small nucleolar RNA SNORD104 8913038 protein-coding Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN astrocyte development (ortholog); astrocyte differentiation (ortholog); cytoplasmic translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955420 23313405 23322748 - 102027533 AGCD01021242;GBCQ01099142;XM_005383350 XP_005383407 MODEL 8833715 protein-coding Fsaf1 40S small subunit processome assembly factor 1 INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); small-subunit processome (ortholog) NW_004955492 7519800 7535234 + 102008952 AGCD01060798;AGCD01060799;AGCD01060800;GBDF01254069;XM_005404977 XP_005405034 MODEL 8867124 protein-coding LOC102007986 tripartite motif-containing protein 5-like NW_004955414 21541749 21555056 - 102007986 AGCD01015423;GBCQ01013376;XM_005380093;XM_013512002;XM_013512004 XP_005380150;XP_013367456;XP_013367458 MODEL 8714502 ncrna LOC102005387 uncharacterized LOC102005387 NW_004955493 5235633 5241231 + 102005387 AGCD01061061;GBDF01080114;XR_001231263 MODEL 8805272 pseudo LOC102018898 60S ribosomal protein L21 pseudogene NW_004955458 2628825 2629154 - 102018898 AGCD01047240;XM_005397497 MODEL 39131629 rrna 5S_rRNA 5S ribosomal RNA 9044467 protein-coding Rassf4 Ras association domain family member 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955546 2277679 2307877 + 102013876 AGCD01072084;GBDF01073498;XM_005411784;XM_005411785 XP_005411841;XP_005411842 MODEL 8982372 protein-coding Slc25a45 solute carrier family 25 member 45 ENCODES a protein that exhibits dimethylarginine transmembrane transporter activity (ortholog); N(6),N(6),N(6)-trimethyl-L-lysine transmembrane transporter activity (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); carnitine biosynthetic process (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955422 19854935 19864585 + 102010271 AGCD01023041;AGCD01023042;GBDK01101373;XM_005384496;XM_005384497 XP_005384553;XP_005384554 MODEL 8758065 protein-coding Diaph3 diaphanous related formin 3 ENCODES a protein that exhibits actin binding (ortholog); cytoskeletal protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Auditory Neuropathy (ortholog); autosomal dominant auditory neuropathy 1 (ortholog); FOUND IN actin filament bundle (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955404 44653308 45106943 + 102005884 AGCD01004425;AGCD01004426;AGCD01004427;AGCD01004428;AGCD01004429;AGCD01004430;AGCD01004431;AGCD01004432;AGCD01004433;AGCD01004434;AGCD01004435;AGCD01004436;AGCD01004437;GBDF01248888;XM_005374208 XP_005374265 MODEL 8775106 ncrna LOC102010723 uncharacterized LOC102010723 NW_004955518 2285051 2292236 + 102010723 AGCD01067775;GBBH01218705;XR_264568 MODEL 8825954 protein-coding Rab7b RAB7B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); late endosome to Golgi transport (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); osteoporosis (ortholog); FOUND IN Golgi apparatus (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955406 41615302 41638157 - 102015373 AGCD01006688;GBDK01084519;XM_005375379;XM_005375380 XP_005375436;XP_005375437 MODEL 8926430 protein-coding LOC102022225 HLA class II histocompatibility antigen, DO beta chain-like NW_004955437 1442202 1449219 - 102022225 AGCD01034209;GBCE01114002;XM_005389456 XP_005389513 MODEL 10214976 protein-coding LOC106148626 collagen alpha-2(V) chain-like NW_004955425 27289505 27338328 + 106148626 AGCD01025968;AGCD01025969;GBBH01121169;XM_013514782 XP_013370236 MODEL 8922699 ncrna LOC102025389 uncharacterized LOC102025389 NW_004955435 618650 622278 - 102025389 AGCD01032727;GBDF01254184;XR_261650 MODEL 8790286 protein-coding Art4 ADP-ribosyltransferase 4 (inactive) (Dombrock blood group) ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955413 11569779 11586548 - 102030619 AGCD01013964;AGCD01013965;GBDI01055135;XM_005379011 XP_005379068 MODEL 8702169 protein-coding Ltb4r leukotriene B4 receptor ENCODES a protein that exhibits leukotriene B4 receptor activity (ortholog); leukotriene receptor activity (ortholog); INVOLVED IN signal transduction (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH otitis media; Anaphylaxis (ortholog); arteriosclerosis (ortholog) NW_004955409 35984757 35991492 - 102003215 AGCD01010438;GBBH01214872;XM_005377015;XM_005377016 XP_005377072;XP_005377073 MODEL 39132200 rrna 5S_rRNA 5S ribosomal RNA 8761460 protein-coding Ppp3cb protein phosphatase 3 catalytic subunit beta ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcineurin-mediated signaling (ortholog); calcineurin-NFAT signaling cascade (ortholog); calcium-ion regulated exocytosis (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 18323852 18377815 + 102016849 AGCD01034789;AGCD01034790;GBCB01006009;XM_005389972;XM_005389973;XM_005389974;XM_005389975;XM_005389976;XM_005389977;XM_013516758;XM_013516760;XM_013516761 XP_005390029;XP_005390030;XP_005390031;XP_005390032;XP_005390033;XP_005390034;XP_013372212;XP_013372214;XP_013372215 MODEL 9024365 protein-coding LOC102022229 polyprenol reductase-like NW_004955539 2081223 2090140 - 102022229 AGCD01071219;XM_005410906 XP_005410963 MODEL 8822405 protein-coding E2f6 E2F transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 6014476 6029090 - 102006035 AGCD01059351;AGCD01059352;GBCB01002827;XM_005404425 XP_005404482 MODEL 9015984 protein-coding Ddx49 DEAD-box helicase 49 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); RNA helicase activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); regulation of rRNA stability (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955524 2760692 2767709 - 102004196 AGCD01068834;GBCE01077604;XM_005409601 XP_005409658 MODEL 9026064 pseudo LOC102030019 septin-7 pseudogene NW_004955449 17516676 17519119 - 102030019 AGCD01042259;AGCD01042260 MODEL 9053557 protein-coding Riiad1 regulatory subunit of type II PKA R-subunit domain containing 1 ASSOCIATED WITH cholangiocarcinoma (ortholog) NW_004955589 686722 695805 - 102016332 AGCD01076180;AGCD01076181;GBDK01281968;XM_005414556;XM_005414557 XP_005414613;XP_005414614 MODEL 8948687 protein-coding Irf3 interferon regulatory factor 3 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955559 1223986 1228671 + 102010317 AGCD01073637;GBBH01002978;XM_005412858;XM_013508980;XM_013508981;XM_013508982 XP_005412915;XP_013364434;XP_013364435;XP_013364436 MODEL 8713878 ncrna LOC102006829 uncharacterized LOC102006829 NW_004955554 382953 396502 + 102006829 AGCD01072948;GBDF01112731;XR_264945 MODEL 8760058 protein-coding Eno3 enolase 3 ENCODES a protein that exhibits identical protein binding (ortholog); phosphopyruvate hydratase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); response to xenobiotic stimulus (ortholog); skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955467 10363154 10368261 + 102021867 AGCD01051561;GBDF01119625;XM_005399622 XP_005399679 MODEL 9024050 protein-coding Tbata thymus, brain and testes associated ASSOCIATED WITH Hirschsprung's disease (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955437 20569644 20586405 + 102009759 AGCD01034877;GBBH01187342;XM_005390044;XM_005390045;XM_005390046;XM_005390047;XM_013517111;XM_013517112 XP_005390101;XP_005390102;XP_005390103;XP_005390104;XP_013372565;XP_013372566 MODEL 8710624 protein-coding Ttc19 tetratricopeptide repeat domain 19 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH apraxia (ortholog); asthma (ortholog); Ataxia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955467 1381105 1405509 + 102014124 AGCD01051262;AGCD01051263;AGCD01051264;GBCE01045510;GBCQ01125396;XM_005399316 XP_005399373 MODEL 8799652 protein-coding Pum1 pumilio RNA binding family member 1 ENCODES a protein that exhibits miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); miRNA processing (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia type 47 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955452 9487725 9623565 - 102004033 AGCD01044238;AGCD01044239;AGCD01044240;AGCD01044241;AGCD01044242;AGCD01044243;AGCD01044244;AGCD01044245;AGCD01044246;AGCD01044247;GBCB01038506;XM_005395006;XM_005395007;XM_005395009;XM_005395011;XM_005395013;XM_005395014;XM_013519591;XM_013519592;XM_013519593;XM_013519594;XM_013519595;XM_013519596;XM_013519597 XP_005395063;XP_005395064;XP_005395066;XP_005395068;XP_005395070;XP_005395071;XP_013375045;XP_013375046;XP_013375047;XP_013375048;XP_013375049;XP_013375050;XP_013375051 MODEL 9036784 protein-coding Ciita class II major histocompatibility complex transactivator ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to electrical stimulus (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH acute kidney tubular necrosis (ortholog); acute myeloid leukemia (ortholog); Addison's disease (ortholog); FOUND IN cell surface (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 7600903 7647619 - 102006289 AGCD01037625;AGCD01037626;GBDK01084553;XM_013517881;XM_013517882;XM_013517883;XM_013517884;XM_013517886;XM_013517887;XM_013517888;XM_013517889;XM_013517890;XM_013517891;XM_013517892;XM_013517893;XM_013517894 XP_013373335;XP_013373336;XP_013373337;XP_013373338;XP_013373340;XP_013373341;XP_013373342;XP_013373343;XP_013373344;XP_013373345;XP_013373346;XP_013373347;XP_013373348 MODEL 8788569 protein-coding Yif1b Yip1 interacting factor homolog B, membrane trafficking protein INVOLVED IN cilium assembly (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955468 1123924 1133292 + 102017215 AGCD01051757;GBDF01002958;XM_005399857;XM_005399858;XM_005399859;XM_005399860;XM_005399861;XM_005399862;XM_005399864;XM_005399865 XP_005399914;XP_005399915;XP_005399916;XP_005399917;XP_005399918;XP_005399919;XP_005399921;XP_005399922 MODEL 8976686 protein-coding LOC102003930 BPI fold-containing family C protein-like NW_004957031 166 1202 - 102003930 AGCD01080427;XM_005415220 XP_005415277 MODEL 8768599 protein-coding Slc25a46 solute carrier family 25 member 46 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cerebellar Purkinje cell differentiation (ortholog); cristae formation (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Cafe-au-Lait Spots (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955418 4316790 4342748 - 102019172 AGCD01018820;AGCD01018821;GBDJ01348816;XM_005382173;XM_013513025 XP_005382230;XP_013368479 MODEL 8699912 protein-coding Fads2 fatty acid desaturase 2 ENCODES a protein that exhibits acyl-CoA 6-desaturase activity (ortholog); acyl-CoA desaturase activity (ortholog); stearoyl-CoA 9-desaturase activity (ortholog); INVOLVED IN arachidonate metabolite production involved in inflammatory response (ortholog); fatty acid biosynthetic process (ortholog); positive regulation of cellular response to oxidative stress (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH bipolar disorder (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955511 5827797 5842745 - 102020363 AGCD01066587;GBDJ01003271;XM_013506432 XP_013361886 MODEL 10230964 protein-coding CUNH19orf84 chromosome unknown C19orf84 homolog ASSOCIATED WITH COVID-19 (ortholog) NW_004955558 1016920 1019617 + 106147432 AGCD01073411;GBDF01280520;XM_013508903 XP_013364357 MODEL 9048353 protein-coding LOC102003603 polyadenylate-binding protein 1-like 2 NW_004955591 918513 919451 - 102003603 AGCD01076286;XM_005414600 XP_005414657 MODEL 8854232 protein-coding Cpsf1 cleavage and polyadenylation specific factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog) NW_004955454 3024324 3039004 - 102003833 AGCD01045048;GBBH01089190;XM_005395878;XM_005395879 XP_005395935;XP_005395936 MODEL 39133405 snrna U4 U4 spliceosomal RNA 8918707 protein-coding Popdc3 popeye domain cAMP effector 3 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN regulation of membrane potential (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 26 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955411 30566988 30573158 - 102030617 AGCD01012259;GBDF01133919;XM_005377823;XM_013510788 XP_005377880;XP_013366242 MODEL 8986576 protein-coding LOC102026097 taste receptor type 2 member 31-like NW_004955413 8238228 8239157 - 102026097 AGCD01013858;XM_005379634 XP_005379691 MODEL 39133871 misc_rna 7SK 7SK RNA 8978888 protein-coding Fsbp fibrinogen silencer binding protein ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 10649826 10655277 - 102025683 AGCD01018085;GBDI01125813;XM_005381807 XP_005381864 MODEL 8796358 protein-coding Tm4sf18 transmembrane 4 L six family member 18 NW_004955448 550074 569045 - 102019121 AGCD01041233;GBDI01339659;XM_005392995;XM_013518686;XM_013518687 XP_005393052;XP_013374140;XP_013374141 MODEL 39134426 misc_rna 7SK 7SK RNA 8795904 protein-coding Saxo1 stabilizer of axonemal microtubules 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN cellular response to cold (ortholog); cold acclimation (ortholog); positive regulation of cilium assembly (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN axonemal microtubule (ortholog); centriole (ortholog); ciliary basal body (ortholog) NW_004955434 21414937 21454901 - 102024607 AGCD01032628;GBDF01003678;XM_005388724;XM_013516288 XP_005388781;XP_013371742 MODEL 39131735 snorna SNORA70 Small nucleolar RNA SNORA70 8884942 protein-coding Rassf5 Ras association domain family member 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of protein ubiquitination (ortholog); regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); lung cancer (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955406 42086081 42159204 + 102019359 AGCD01006696;AGCD01006697;GBBH01164625;XM_005375394;XM_005375396 XP_005375451;XP_005375453 MODEL 8971700 pseudo LOC102011503 10 kDa heat shock protein, mitochondrial pseudogene NW_004955406 38802378 38802693 + 102011503 AGCD01006609 MODEL 8783454 pseudo LOC102006467 thyroid transcription factor 1-associated protein 26-like NW_004955488 4546212 4563715 + 102006467 AGCD01059598 MODEL 8819076 ncrna LOC102024291 uncharacterized LOC102024291 NW_004955564 1497990 1500048 - 102024291 AGCD01074225;GBDF01014269;XR_265022 MODEL 8764131 protein-coding Bfsp2 beaded filament structural protein 2 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN cell maturation (ortholog); cytoskeleton organization (ortholog); intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 12 multiple types (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog); plasma membrane (ortholog) NW_004955501 5083456 5145256 - 102030332 AGCD01064150;AGCD01064151;AGCD01064152;GBCE01061604;XM_005406819 XP_005406876 MODEL 8964058 protein-coding Tbc1d1 TBC1 domain family member 1 INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of cilium assembly (ortholog); regulation of protein localization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog) NW_004955443 9045312 9270617 - 102008269 AGCD01038342;AGCD01038343;AGCD01038344;AGCD01038345;AGCD01038346;GBCB01025606;GBCQ01036341;XM_013518063 XP_013373517 MODEL 8935774 pseudo LOC102012724 ras-related protein Rab-5A pseudogene NW_004955404 17557735 17563974 - 102012724 AGCD01003594 MODEL 730469363 snorna snosnR60_Z15 Small nucleolar RNA snR60/Z15/Z230/Z193/J17 8717283 protein-coding LOC102013146 gametocyte-specific factor 1-like NW_004955458 1718253 1730596 - 102013146 AGCD01047201;AGCD01047202;GBBH01224139;XM_013520795 XP_013376249 MODEL 8805269 protein-coding Ltb4r2 leukotriene B4 receptor 2 ENCODES a protein that exhibits leukotriene B4 receptor activity (ortholog); INVOLVED IN keratinocyte migration (ortholog); signal transduction (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955409 35989425 35991492 - 102018478 AGCD01010438;XM_013510397 XP_013365851 MODEL 8794256 protein-coding Eif2d eukaryotic translation initiation factor 2D ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955406 42163508 42181482 - 102020307 AGCD01006697;GBDK01278150;XM_005375397;XM_013523095 XP_005375454;XP_013378549 MODEL 8973175 protein-coding E2f7 E2F transcription factor 7 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); hepatocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955405 16148640 16187272 - 102015172 AGCD01004963;GBDF01076465;XM_005374349;XM_005374351;XM_013517776 XP_005374406;XP_005374408;XP_013373230 MODEL 8886684 protein-coding LOC102022231 putative t-complex protein 10A homolog 2 NW_004955439 14849266 14879375 - 102022231 AGCD01035991;GBDF01004436;XM_005390639;XM_013517308;XM_013517309;XM_013517310 XP_005390696;XP_013372762;XP_013372763;XP_013372764 MODEL 8854453 pseudo LOC102007993 28S ribosomal protein S36, mitochondrial pseudogene NW_004955474 11143140 11143451 - 102007993 AGCD01054611;XM_005401469 MODEL 8872743 protein-coding Skor1 SKI family transcriptional corepressor 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); SMAD binding (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); nucleus (ortholog) NW_004955450 8184843 8195626 - 102005094 AGCD01042563;AGCD01042564;GBDF01124401;XM_013518829 XP_013374283 MODEL 8888099 protein-coding Capza3 capping actin protein of muscle Z-line subunit alpha 3 INVOLVED IN actin filament organization (ortholog); cytoplasm organization (ortholog); spermatid development (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN acrosomal vesicle (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) NW_004955413 14846394 14847489 + 102012084 AGCD01014053;GBDF01006903;XM_005379041 XP_005379098 MODEL 8759651 protein-coding Ccnt1 cyclin T1 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase activator activity (ortholog); INVOLVED IN host-mediated activation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); lymphoma (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955500 7580625 7606913 - 102006480 AGCD01063933;AGCD01063934;AGCD01063935;GBCQ01150173;XM_005406661;XR_001231467 XP_005406718 MODEL 8967301 protein-coding LOC102006830 hemoglobin subunit alpha NW_004955442 17005234 17006044 - 102006830 AGCD01037931;GBBH01003742;XM_005391672 XP_005391729 MODEL 8813859 protein-coding Cpsf2 cleavage and polyadenylation specific factor 2 INVOLVED IN mRNA 3'-end processing (ortholog); mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); postsynapse (ortholog) NW_004955438 14449320 14483003 + 102022329 AGCD01035346;GBDF01084085;XM_005390313;XM_005390314;XM_005390315;XM_005390317;XM_005390318;XM_005390319;XM_005390320;XM_005390321;XM_013517185;XM_013517186;XM_013517187;XM_013517189;XM_013517190;XM_013517191;XM_013517192 XP_005390370;XP_005390371;XP_005390372;XP_005390374;XP_005390375;XP_005390376;XP_005390377;XP_005390378;XP_013372639;XP_013372640;XP_013372641;XP_013372643;XP_013372644;XP_013372645;XP_013372646 MODEL 8881227 pseudo LOC102009487 heterogeneous nuclear ribonucleoprotein A1-like NW_004955467 9990149 9991458 + 102009487 AGCD01051538 MODEL 10181322 ncrna LOC106147535 uncharacterized LOC106147535 NW_004955575 134469 142129 - 106147535 AGCD01075204;GBDK01096539;XR_001232459 MODEL 8892522 protein-coding Rab8a RAB8A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN axonogenesis (ortholog); cellular response to insulin stimulus (ortholog); cilium assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); rheumatoid arthritis (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955524 1403811 1416005 - 102023187 AGCD01068749;GBBH01023807;XM_005409485 XP_005409542 MODEL 39132202 rrna 5S_rRNA 5S ribosomal RNA 8858498 protein-coding Art5 ADP-ribosyltransferase 5 ENCODES a protein that exhibits NAD+ nucleosidase activity (ortholog); NAD+-protein-arginine ADP-ribosyltransferase activity (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955414 19460652 19464771 - 102007218 AGCD01081640;GBDJ01335349;XM_005380023 XP_005380080 MODEL 8872761 protein-coding Slc25a47 solute carrier family 25 member 47 ENCODES a protein that exhibits acetyl-CoA transmembrane transporter activity (ortholog); NAD transmembrane transporter activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); prostate cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955438 21406270 21413946 + 102005970 AGCD01035542;GBBH01182249;XM_005390431;XM_005390432 XP_005390488;XP_005390489 MODEL 8807962 protein-coding LOC102005721 RNA-binding protein 14 NW_004955422 18730230 18755479 - 102005721 AGCD01022960;GBBH01033313;XM_005384379;XM_005384380;XM_005384381;XM_005384383;XM_005384385;XM_013513904;XM_013513905;XM_013513906 XP_005384436;XP_005384437;XP_005384438;XP_005384440;XP_005384442;XP_013369358;XP_013369359;XP_013369360 MODEL 8724762 protein-coding Ddx5 DEAD-box helicase 5 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); androgen receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955478 7367049 7375043 + 102012756 AGCD01055958;AGCD01055959;GBDF01007791;XM_013503173 XP_013358627 MODEL 39131630 rrna 5S_rRNA 5S ribosomal RNA 8976324 pseudo LOC102018899 39S ribosomal protein L47, mitochondrial-like NW_004955409 7916768 7917852 - 102018899 AGCD01009369 MODEL 8839380 protein-coding LOC102026101 olfactory receptor 52E2-like NW_004955414 20567868 20568821 + 102026101 AGCD01015380;XM_005380475 XP_005380532 MODEL 39133872 misc_rna 7SK 7SK RNA 8744166 protein-coding LOC102010724 putative inactive carboxylesterase 4 NW_004955433 13538663 13552591 - 102010724 AGCD01031695;XM_013516106 XP_013371560 MODEL 8852951 protein-coding Rilp Rab interacting lysosomal protein ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); small GTPase binding (ortholog); sterol sensor activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); early endosome to late endosome transport (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN endosome membrane (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955481 1531175 1534794 + 102018598 AGCD01056834;AGCD01056835;GBDF01180428;XM_005402615;XM_005402616;XM_013503411;XM_013503412 XP_005402672;XP_005402673;XP_013358865;XP_013358866 MODEL 8986751 protein-coding Por P450 (cytochrome) oxidoreductase ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); electron transfer activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; doxorubicin pharmacokinetics pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); amenorrhea (ortholog); Antley-Bixler syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955456 14698589 14748520 + 102006877 AGCD01046650;GBDI01012447;XM_005396803;XM_013520565 XP_005396860;XP_013376019 MODEL 8969041 pseudo LOC102025391 synapse-associated protein 1 pseudogene NW_004955529 271045 272081 - 102025391 AGCD01069627 MODEL 8766571 pseudo LOC102022232 speckle-type POZ protein pseudogene NW_004955546 4562 5672 + 102022232 AGCD01071942 MODEL 9061137 protein-coding Ttc21a tetratricopeptide repeat domain 21A INVOLVED IN flagellated sperm motility (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955427 24833021 24862199 - 102028112 AGCD01027524;GBDF01085603;XM_013515069;XM_013515070;XM_013515071;XM_013515072;XM_013515073;XM_013515074 XP_013370523;XP_013370524;XP_013370525;XP_013370526;XP_013370527;XP_013370528 MODEL 8841466 protein-coding Tm4sf19 transmembrane 4 L six family member 19 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of osteoclast differentiation (ortholog); FOUND IN actin cytoskeleton (ortholog); filopodium (ortholog); lysosomal membrane (ortholog) NW_004955420 12532435 12558861 - 102011772 AGCD01020871;AGCD01020872;AGCD01020873;AGCD01020874;GBBH01073716;XM_005383131;XM_013513400;XM_013513401 XP_005383188;XP_013368854;XP_013368855 MODEL 39131736 snorna SNORA70 Small nucleolar RNA SNORA70 8862318 protein-coding Pum2 pumilio RNA binding family member 2 ENCODES a protein that exhibits lncRNA binding (ortholog); miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN adipose tissue development (ortholog); chromosome organization (ortholog); cytoplasmic stress granule assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955469 2810825 2886911 - 102013072 AGCD01052285;AGCD01052286;AGCD01052287;AGCD01052288;GBDK01194835;XM_005400344;XM_005400346;XM_005400350;XM_013522625;XM_013522626;XM_013522627;XM_013522628;XM_013522629;XM_013522630;XM_013522631 XP_005400401;XP_005400403;XP_005400407;XP_013378079;XP_013378080;XP_013378081;XP_013378082;XP_013378083;XP_013378084;XP_013378085 MODEL 8842154 pseudo LOC102003933 pannexin-1 pseudogene NW_004955451 1471730 1473218 + 102003933 AGCD01042971 MODEL 8754892 protein-coding Cilk1 ciliogenesis associated kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); intracellular signal transduction (ortholog); intraciliary anterograde transport (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); asphyxiating thoracic dystrophy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); ciliary tip (ortholog) NW_004955411 2997726 3065106 + 102013150 AGCD01011530;AGCD01011531;AGCD01011532;AGCD01011533;GBDI01025878;XM_005377612;XM_013510736;XM_013510737;XM_013510738;XM_013510739 XP_005377669;XP_013366190;XP_013366191;XP_013366192;XP_013366193 MODEL 9011189 protein-coding Rassf6 Ras association domain family member 6 INVOLVED IN positive regulation of apoptotic process (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955657 49115 59237 - 102014850 AGCD01077855;AGCD01077856;AGCD01077857;GBDI01028020;XM_005415062;XM_005415063 XP_005415119;XP_005415120 MODEL 8922489 protein-coding Ccnt2 cyclin T2 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); chromatin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN early viral transcription (ortholog); late viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955440 2424976 2468388 + 102004860 AGCD01036207;GBDF01221338;XM_005390750;XM_005390752;XM_005390754;XM_005390755;XM_013517468;XM_013517469;XR_262000 XP_005390807;XP_005390809;XP_005390811;XP_005390812;XP_013372922;XP_013372923 MODEL 8925478 protein-coding Yipf1 Yip1 domain family member 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi medial cisterna (ortholog); Golgi trans cisterna (ortholog) NW_004955464 5369690 5408470 + 102009700 AGCD01050006;GBDF01051315;XM_005398553;XM_005398554;XM_005398555 XP_005398610;XP_005398611;XP_005398612 MODEL 8889622 pseudo LOC102006469 signal recognition particle 14 kDa protein-like NW_004955492 7321458 7321798 + 102006469 AGCD01060786 MODEL 8860696 protein-coding Ppp3cc protein phosphatase 3 catalytic subunit gamma ENCODES a protein that exhibits calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin-dependent protein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); penetration of zona pellucida (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955403 45915985 45969350 + 102008283 AGCD01002843;AGCD01002844;AGCD01002845;GBDJ01189557;GBDK01398281;XM_005373663 XP_005373720 MODEL 8798102 protein-coding LOC102003605 protein FAM127A NW_004955602 144599 145888 + 102003605 AGCD01076763;AGCD01076764;GBBH01002232;GBCQ01009918;XM_005414828 XP_005414885 MODEL 8871145 pseudo LOC102005391 olfactory receptor 9A4-like NW_004955494 1701718 1710311 - 102005391 AGCD01061420 MODEL 39133407 snrna U4 U4 spliceosomal RNA 8823034 protein-coding Rab8b RAB8B, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); signaling receptor binding (ortholog); TPR domain binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cell-substrate junction organization (ortholog); cilium assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); Liver Reperfusion Injury (ortholog); FOUND IN cell tip (ortholog); endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955450 12026784 12095332 - 102028150 AGCD01042686;AGCD01042687;GBDJ01140085;XM_005393793 XP_005393850 MODEL 8977645 protein-coding Fscb fibrous sheath CABYR binding protein ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN negative regulation of protein sumoylation (ortholog); FOUND IN sperm fibrous sheath (ortholog); sperm principal piece (ortholog) NW_004955409 17433213 17435957 + 102012408 AGCD01009783;GBDK01150669;XM_013510122 XP_013365576 MODEL 9052322 protein-coding Eno4 enolase 4 ENCODES a protein that exhibits phosphopyruvate hydratase activity (ortholog); INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); glycolytic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); male infertility (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955431 21625808 21650282 + 102024713 AGCD01030496;GBCE01181692;XM_005387856;XM_005387858;XM_005387859 XP_005387913;XP_005387915;XP_005387916 MODEL 10261391 protein-coding LOC106148627 calcium-binding protein P-like NW_004955425 27836354 27837795 - 106148627 AGCD01025990;XM_013514783 XP_013370237 MODEL 8999985 protein-coding Skor2 SKI family transcriptional corepressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellum morphogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Dysarthria (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955402 32577189 32618611 - 102027366 AGCD01000826;AGCD01000827;GBDF01021613;XM_013510345 XP_013365799 MODEL 8750803 protein-coding Saxo2 stabilizer of axonemal microtubules 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955416 12789683 12811159 + 102027637 AGCD01017212;AGCD01017213;GBDF01086244;XM_005381455;XM_005381456;XM_005381457;XM_005381458 XP_005381512;XP_005381513;XP_005381514;XP_005381515 MODEL 8797992 pseudo LOC102024292 transcription initiation factor TFIID subunit 2-like NW_004955448 12293896 12314391 - 102024292 AGCD01041546 MODEL 8927989 protein-coding LOC102011504 keratin-associated protein 8-1 NW_004955407 30527468 30528014 - 102011504 AGCD01007636;XM_005375654 XP_005375711 MODEL 8717709 pseudo LOC102030021 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like NW_004955402 35443964 35454925 - 102030021 AGCD01000887 MODEL 8899079 protein-coding LOC102009491 olfactory receptor 52N1-like NW_004955414 21756367 21757263 - 102009491 AGCD01015432;XM_013511765 XP_013367219 MODEL 9063657 protein-coding Fads3 fatty acid desaturase 3 INVOLVED IN gene expression (ortholog); unsaturated fatty acid biosynthetic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog) NW_004955511 5814842 5826288 + 102008967 AGCD01066586;AGCD01066587;GBDJ01003277;XM_005408137;XM_005408138;XM_005408140 XP_005408194;XP_005408195;XP_005408197 MODEL 8869097 protein-coding Bglap bone gamma-carboxyglutamate protein ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); hormone activity (ortholog); INVOLVED IN bone development (ortholog); brain development (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH asthma (ortholog); autosomal dominant hypocalcemia (ortholog); Bone Fractures (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955545 2381091 2382114 + 102022427 AGCD01071898;GBDJ01042544;XM_005411659 XP_005411716 MODEL 8775166 ncrna LOC102012730 uncharacterized LOC102012730 NW_004955407 18730128 18738547 + 102012730 AGCD01007275;GBDF01261213;XR_259575 MODEL 39131737 snorna SNORA70 Small nucleolar RNA SNORA70 8906069 protein-coding Irf4 interferon regulatory factor 4 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); defense response to protozoan (ortholog); myeloid dendritic cell differentiation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); anaplastic large cell lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955465 12497534 12512529 - 102026089 AGCD01050549;GBBH01228624;GBDJ01163364;XM_013521871;XM_013521872;XM_013521873 XP_013377325;XP_013377326;XP_013377327 MODEL 8981706 pseudo LOC102013154 lys-63-specific deubiquitinase BRCC36-like NW_004955466 7752096 7926894 + 102013154 AGCD01050961;AGCD01050962;AGCD01050963;AGCD01050964;AGCD01050965;AGCD01050966;AGCD01050967;AGCD01050968;AGCD01050969;AGCD01050970;AGCD01050971;AGCD01050972 MODEL 39132204 rrna 5S_rRNA 5S ribosomal RNA 8724092 protein-coding Tbc1d10a TBC1 domain family member 10A ENCODES a protein that exhibits GTPase activator activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of proteolysis (ortholog); regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955455 4537634 4570949 - 102018564 AGCD01045679;AGCD01045680;GBDF01052787;XM_005396252 XP_005396309 MODEL 8920298 ncrna LOC102008005 uncharacterized LOC102008005 NW_004955494 6144787 6169872 + 102008005 AGCD01061530;GBDF01223353;XR_001231296;XR_264116 MODEL 8772060 protein-coding Ltbp1 latent transforming growth factor beta binding protein 1 ENCODES a protein that exhibits microfibril binding (ortholog); molecular adaptor activity (ortholog); receptor ligand inhibitor activity (ortholog); INVOLVED IN aorta development (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Autosomal Recessive Cutis Laxa Type IIE (ortholog); basal cell carcinoma (ortholog); FOUND IN dendrite (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955441 1405340 1626668 + 102023637 AGCD01036754;AGCD01036755;AGCD01036756;GBCQ01011811;XM_013517601;XM_013517602;XM_013517603;XM_013517604 XP_013373055;XP_013373056;XP_013373057;XP_013373058 MODEL 39134427 misc_rna 7SK 7SK RNA 8850929 protein-coding Dicer1 dicer 1, ribonuclease III ENCODES a protein that exhibits double-stranded RNA binding (ortholog); miRNA binding (ortholog); pre-miRNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cardiac muscle cell development (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH adult cystic nephroma (ortholog); anxiety disorder (ortholog); breast carcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955438 17374899 17431599 + 102018859 AGCD01035441;GBCQ01012900;XM_013517206 XP_013372660 MODEL 8963522 protein-coding Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ENCODES a protein that exhibits cap-dependent translation initiation factor activity (ortholog); IRES-mediated translation initiation factor activity (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to heat (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955466 2838785 2855443 - 102016902 AGCD01050768;AGCD01050769;GBCB01021958;XM_005399085;XM_005399086;XM_005399087;XM_013521972 XP_005399142;XP_005399143;XP_005399144;XP_013377426 MODEL 8843723 protein-coding Artn artemin ENCODES a protein that exhibits growth factor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); induction of positive chemotaxis (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); Animal Disease Models (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955537 3460176 3464335 + 102007592 AGCD01070959;GBCE01108535;XM_005410688;XM_013507753;XM_013507754;XM_013507755;XM_013507756 XP_005410745;XP_013363207;XP_013363208;XP_013363209;XP_013363210 MODEL 9002617 protein-coding Ppp3r1 protein phosphatase 3 regulatory subunit B, alpha ENCODES a protein that exhibits enzyme binding (ortholog); phosphatase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); calcineurin-NFAT signaling cascade (ortholog); epithelial to mesenchymal transition (ortholog); PARTICIPATES IN calcineurin signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN calcineurin complex (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955424 16624214 16690783 + 102022718 AGCD01024746;AGCD01024747;AGCD01024748;GBDF01190278;XM_005385670;XM_005385671;XM_005385672 XP_005385727;XP_005385728;XP_005385729 MODEL 39133302 misc_rna 7SK 7SK RNA 8986048 protein-coding LOC102006831 uncharacterized LOC102006831 NW_004955442 12111453 12371491 - 102006831 AGCD01037728;AGCD01037729;AGCD01037730;XM_005391851 XP_005391908 MODEL 8709267 protein-coding Capzb capping actin protein of muscle Z-line subunit beta ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); barbed-end actin filament capping (ortholog); cell projection organization (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN brush border (ortholog); cortical cytoskeleton (ortholog); dendritic spine (ortholog) NW_004955452 34454 168514 - 102011618 AGCD01043797;AGCD01043798;AGCD01043799;AGCD01043800;AGCD01043801;AGCD01043802;GBCE01000866;XM_005394657;XM_005394658 XP_005394714;XP_005394715 MODEL 8788936 p