# RGD-PIPELINE: ftp-file-extracts # MODULE: chinchilla-genes-version-2023-03-10 # GENERATED-ON: 2026/02/28 # PURPOSE: information about active chinchilla genes extracted from RGD database # CONTACT: rgd.data@mcw.edu # FORMAT: tab delimited text # NOTES: multiple values in a single column are separated by ';' # #COLUMN INFORMATION: #1 GENE_RGD_ID RGD_ID of the gene #2 GENE_TYPE gene type #3 SYMBOL official gene symbol #4 NAME gene name #5 GENE_DESC gene description (if available) #6 CONTIG contig acc id #7 START_POS start position within contig #8 STOP_POS stop position within contig #9 STRAND strand information #10 NCBI_GENE_ID NCBI Gene ID #11 GENBANK_NUCLEOTIDE GenBank Nucleotide ID(s) #12 GENBANK_PROTEIN GenBank Protein ID(s) #13 GENE_REFSEQ_STATUS gene RefSeq Status (from NCBI) 8864507 protein-coding Elmod1 ELMO domain containing 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cilium assembly (ortholog); intracellular protein localization (ortholog); protein transport (ortholog); FOUND IN cilium (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955412 9975110 10013932 + 102028513 AGCD01012753;AGCD01012754;GBCE01023906;GBDI01135314;XM_013511123 XP_013366577 MODEL 8886297 ncrna LOC102005400 uncharacterized LOC102005400 NW_004955507 3809575 3820981 - 102005400 AGCD01065638;GBDF01158104;XR_001231636 MODEL 8825357 protein-coding LOC102005403 olfactory receptor 8J3-like NW_004955511 1471770 1480062 + 102005403 AGCD01066369;XM_005407962 XP_005408019 MODEL 8932390 protein-coding Elmod2 ELMO domain containing 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of defense response to virus (ortholog); ASSOCIATED WITH long QT syndrome (ortholog) NW_004955428 3289593 3308927 - 102013315 AGCD01027652;GBCQ01127045;XM_005386672;XM_005386673 XP_005386729;XP_005386730 MODEL 8993252 protein-coding LOC102005404 olfactory receptor 5L1-like NW_004955511 647139 648068 + 102005404 AGCD01066337;XM_005408203 XP_005408260 MODEL 8913267 protein-coding LOC102005406 uncharacterized LOC102005406 NW_004955514 858595 900031 - 102005406 AGCD01067024;AGCD01067025;GBBH01100117;XM_013506745 XP_013362199 MODEL 9019281 protein-coding Elmod3 ELMO domain containing 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN auditory receptor cell development (ortholog); cilium assembly (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 81 (ortholog); autosomal recessive nonsyndromic deafness 88 (ortholog); hypomyelinating leukodystrophy 7 (ortholog); FOUND IN cilium (ortholog); Golgi apparatus (ortholog) NW_004955424 2082480 2107599 - 102005273 AGCD01024262;GBBH01150506;XM_005385437;XM_005385438;XM_013514628 XP_005385494;XP_005385495;XP_013370082 MODEL 8704247 pseudo LOC102005408 nucleosome assembly protein 1-like 1 pseudogene NW_004955515 171191 172070 + 102005408 AGCD01067185 MODEL 8890822 protein-coding Eln elastin ENCODES a protein that exhibits extracellular matrix binding (ortholog); extracellular matrix constituent conferring elasticity (ortholog); INVOLVED IN aorta development (ortholog); aortic valve morphogenesis (ortholog); blood vessel remodeling (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Anetoderma (ortholog); aortic aneurysm (ortholog); FOUND IN elastic fiber (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955456 13788992 13818836 - 102020983 AGCD01046622;AGCD01046623;GBDF01022221;XM_013520582;XM_013520583;XM_013520584;XM_013520585;XM_013520586;XM_013520587;XM_013520588;XM_013520589;XM_013520590;XM_013520591;XM_013520592;XM_013520593 XP_013376036;XP_013376037;XP_013376038;XP_013376039;XP_013376040;XP_013376041;XP_013376042;XP_013376043;XP_013376044;XP_013376045;XP_013376046;XP_013376047 MODEL 8925355 pseudo LOC102005409 CTD small phosphatase-like protein 2 pseudogene NW_004955520 665791 667200 - 102005409 AGCD01068028 MODEL 8722832 protein-coding Eloa elongin A INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); FOUND IN elongin complex (ortholog); nuclear speck (ortholog); site of DNA damage (ortholog) NW_004955452 3668868 3681506 + 102018252 AGCD01043934;GBDF01087483;XM_013519496 XP_013374950 MODEL 9053374 ncrna LOC102005410 uncharacterized LOC102005410 NW_004955435 5085524 5096408 - 102005410 AGCD01032876;GBDF01087889;XR_001234879 MODEL 8873723 protein-coding Elob elongin B ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); target-directed miRNA degradation (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); elongin complex (ortholog) NW_004955442 14498666 14501895 - 102015897 AGCD01037821;GBCQ01007574;GBDF01006908;XM_005391402 XP_005391459 MODEL 8862066 ncrna LOC102005411 uncharacterized LOC102005411 NW_004955435 20027434 20045778 - 102005411 AGCD01033445;GBDF01117536;XR_261728 MODEL 8906171 protein-coding CUNHXorf66 chromosome unknown CXorf66 homolog NW_004955489 5318531 5327883 + 102030639 AGCD01059934;AGCD01059935;GBDF01195698;XM_005404549 XP_005404606 MODEL 8726904 protein-coding Eloc elongin C ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription corepressor binding (ortholog); INVOLVED IN positive regulation of transcription elongation by RNA polymerase II (ortholog); protein ubiquitination (ortholog); target-directed miRNA degradation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); elongin complex (ortholog) NW_004955444 6400721 6415881 + 102020296 AGCD01038864;AGCD01038865;GBDF01004742;XM_005392079;XM_005392080 XP_005392136;XP_005392137 MODEL 8928448 protein-coding LOC102005416 complement C4-A NW_004955437 492806 505554 + 102005416 AGCD01034137;AGCD01034138;GBCE01002333;XM_013516778 XP_013372232 MODEL 8739921 protein-coding Cuta cutA divalent cation tolerance homolog ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) NW_004955437 1947139 1948657 - 102005747 AGCD01034245;GBDK01069771;XM_005389493;XM_005389494;XM_013516769 XP_005389550;XP_005389551;XP_013372223 MODEL 9032728 protein-coding Elof1 elongation factor 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN transcription-coupled nucleotide-excision repair (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955495 2403566 2406182 - 102026651 AGCD01061770;GBDF01005723;XM_005405674;XM_013505116;XM_013505117 XP_005405731;XP_013360570;XP_013360571 MODEL 8805200 protein-coding Cutc cutC copper transporter ENCODES a protein that exhibits copper ion binding (ortholog); INVOLVED IN protein tetramerization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955507 5617595 5664131 + 102016622 AGCD01065680;AGCD01065681;AGCD01065682;AGCD01065683;AGCD01065684;GBDF01308367;XM_005407673;XM_005407674;XM_005407675;XM_005407676;XM_013506197;XM_013506198;XR_001231629;XR_001231630 XP_005407730;XP_005407731;XP_005407732;XP_005407733;XP_013361651;XP_013361652 MODEL 8945604 protein-coding LOC102005424 trafficking protein particle complex subunit 6A NW_004955555 2169073 2183696 - 102005424 AGCD01073131;GBCQ01014265;XM_005412499;XM_005412500;XM_005412502;XM_013508760;XM_013508761;XM_013508762;XM_013508763 XP_005412556;XP_005412557;XP_005412559;XP_013364214;XP_013364215;XP_013364216;XP_013364217 MODEL 8807388 protein-coding LOC102009447 vomeronasal type-1 receptor 4-like NW_004955603 356667 357605 - 102009447 AGCD01076839;XM_005414843 XP_005414900 MODEL 8888498 protein-coding Elovl1 ELOVL fatty acid elongase 1 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); ASSOCIATED WITH ICHTHYOTIC KERATODERMA, SPASTICITY, HYPOMYELINATION, AND DYSMORPHIC FACIAL FEATURES (ortholog); optic atrophy (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955537 2945509 2950146 - 102026566 AGCD01070940;GBCE01055429;XM_005410653;XM_013507748 XP_005410710;XP_013363202 MODEL 8809088 pseudo LOC102009451 archaemetzincin-2-like NW_004955403 30870358 30871472 + 102009451 AGCD01002408 MODEL 8937414 pseudo LOC102005429 uncharacterized LOC102005429 NW_004955585 307477 456009 + 102005429 AGCD01075996;AGCD01075997 MODEL 8760621 protein-coding Elovl2 ELOVL fatty acid elongase 2 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); fatty acid elongase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); very long-chain fatty acid biosynthetic process (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955465 3413923 3433558 + 102019043 AGCD01050378;GBDJ01127241;XM_005398829 XP_005398886 MODEL 8852997 protein-coding Cux1 cut like homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN inner ear auditory receptor cell differentiation (ortholog); kidney development (ortholog); lung development (ortholog); ASSOCIATED WITH Carcinogenesis (ortholog); colorectal cancer (ortholog); Duane retraction syndrome (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955456 15292562 15636835 - 102018803 AGCD01046667;AGCD01046668;AGCD01046669;AGCD01046670;AGCD01046671;GBCB01021487;GBDJ01094797;XM_013520550 XP_013376004 MODEL 9065642 pseudo LOC102009452 serine/arginine repetitive matrix protein 1 pseudogene NW_004955451 7812936 7823923 - 102009452 AGCD01043254 MODEL 8945846 protein-coding Elovl3 ELOVL fatty acid elongase 3 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955485 8141818 8144458 - 102020124 AGCD01058692;XM_005403852;XM_013504025 XP_005403909;XP_013359479 MODEL 8780625 protein-coding LOC102005435 beta-defensin 33-like NW_004955403 53686697 53694266 + 102005435 AGCD01003067;AGCD01003068;AGCD01003069;GBDK01170251;XM_005373836 XP_005373893 MODEL 9024009 ncrna LOC102009454 uncharacterized LOC102009454 NW_004955452 11752081 11769463 + 102009454 AGCD01044343;GBCB01079032;XR_262680 MODEL 8963881 protein-coding Cux2 cut like homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cognition (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 67 (ortholog); FOUND IN nucleus (ortholog) NW_004955482 7783483 8045808 + 102005380 AGCD01057490;AGCD01057491;AGCD01057492;AGCD01057493;AGCD01057494;AGCD01057495;AGCD01057496;AGCD01057497;AGCD01057498;AGCD01057499;GBDF01087934;GBDF01087936;XM_013503646 XP_013359100 MODEL 8988150 ncrna LOC102005440 uncharacterized LOC102005440 NW_004955405 37765968 37767069 + 102005440 AGCD01005459;GBDF01250670;XR_001236121 MODEL 8825996 protein-coding Elovl4 ELOVL fatty acid elongase 4 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN circadian rhythm (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH corneal dystrophy (ortholog); diabetic retinopathy (ortholog); fundus dystrophy (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955502 7764451 7774503 - 102016495 AGCD01064461;GBCC01001147;XM_013505842 XP_013361296 MODEL 8996401 protein-coding LOC102009461 immunoglobulin omega chain-like NW_004955455 6648451 6649016 + 102009461 AGCD01045803;XM_005396575 XP_005396632 MODEL 8937771 protein-coding Cuzd1 CUB and zona pellucida like domains 1 INVOLVED IN hormone-mediated signaling pathway (ortholog); trypsinogen activation (ortholog); FOUND IN membrane (ortholog); zymogen granule (ortholog); zymogen granule membrane (ortholog) NW_004955477 1055245 1067702 - 102023588 AGCD01055502;GBDF01014874;XM_005401950 XP_005402007 MODEL 8882966 protein-coding Elovl5 ELOVL fatty acid elongase 5 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH atherosclerosis (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN dendritic tree (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955411 2747232 2812544 + 102011288 AGCD01011516;AGCD01011517;AGCD01011518;GBDF01007036;XM_005377606 XP_005377663 MODEL 8954256 protein-coding LOC102005442 endothelin-converting enzyme-like 1 NW_004955453 3475528 3480680 + 102005442 AGCD01044660;GBDJ01085718;GBDK01397222;XM_013520001 XP_013375455 MODEL 8841411 protein-coding Deptor DEP domain containing MTOR interacting protein ENCODES a protein that exhibits phosphatidic acid binding (ortholog); protein kinase inhibitor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell size (ortholog); negative regulation of protein kinase activity (ortholog); negative regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN lysosomal membrane (ortholog) NW_004955417 25538609 25563374 + 102008413 AGCD01018490;AGCD01018491;GBCB01025767;XM_005381914;XM_005381915;XM_013512835 XP_005381971;XP_005381972;XP_013368289 MODEL 9051992 pseudo LOC102009463 cordon-bleu protein-like 1 NW_004955407 25359436 25360666 + 102009463 AGCD01007501 MODEL 8978811 protein-coding Crppa CDP-L-ribitol pyrophosphorylase A ENCODES a protein that exhibits cytidylyltransferase activity (ortholog); D-ribitol-5-phosphate cytidylyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); glycoprotein biosynthetic process (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2U (ortholog); congenital muscular dystrophy (ortholog); congenital muscular dystrophy due to integrin alpha-7 deficiency (ortholog); FOUND IN cytosol (ortholog) NW_004955410 19359495 19614283 - 102020989 AGCD01011019;AGCD01011020;AGCD01011021;AGCD01011022;AGCD01011023;AGCD01011024;GBBH01022616;GBCQ01032334;XM_013510696 XP_013366150 MODEL 9026268 protein-coding Elovl6 ELOVL fatty acid elongase 6 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); obesity (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fatty acid elongase complex (ortholog) NW_004955496 179634 301908 + 102022717 AGCD01062223;AGCD01062224;AGCD01062225;GBCQ01134913;XM_005406181;XM_005406182;XM_013505419 XP_005406238;XP_005406239;XP_013360873 MODEL 8770695 protein-coding Cwc15 CWC15 spliceosome associated protein homolog INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955605 32721 42981 + 102023419 AGCD01076929;GBCQ01062528;XM_005414886 XP_005414943 MODEL 8774380 protein-coding LOC102005443 keratin-associated protein 20-1-like NW_004955407 30075930 30076100 + 102005443 AGCD01007625;XM_005375636 XP_005375693 MODEL 8921665 protein-coding Dera deoxyribose-phosphate aldolase ENCODES a protein that exhibits deoxyribose-phosphate aldolase activity (ortholog); INVOLVED IN deoxyribonucleoside catabolic process (ortholog); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955413 12571341 12682985 + 102006998 AGCD01013992;AGCD01013993;AGCD01013994;AGCD01013995;GBDF01053025;XM_005379023;XM_013511619 XP_005379080;XP_013367073 MODEL 8721023 protein-coding LOC102009464 chromosome unknown open reading frame, human C5orf15 NW_004955408 5245336 5256655 - 102009464 AGCD01008129;GBCQ01005179;XM_005376124;XM_005376125 XP_005376181;XP_005376182 MODEL 8773874 pseudo LOC102005444 zinc finger protein 649-like NW_004955408 34633994 34635786 + 102005444 AGCD01008914 MODEL 8855148 protein-coding Elovl7 ELOVL fatty acid elongase 7 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); very long-chain fatty acid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955446 7732291 7758842 + 102005647 AGCD01040128;AGCD01040129;GBDF01215158;XM_013518450;XM_013518451 XP_013373904;XP_013373905 MODEL 8790467 protein-coding Crtac1 cartilage acidic protein 1 INVOLVED IN axonal fasciculation (ortholog); olfactory bulb development (ortholog); regulation of synapse assembly (ortholog); FOUND IN glutamatergic synapse (ortholog); growth cone (ortholog); postsynaptic density (ortholog) NW_004955507 3916803 4062118 - 102007922 AGCD01065639;AGCD01065640;GBDJ01253920;XM_005407641;XM_005407643;XM_005407644 XP_005407698;XP_005407700;XP_005407701 MODEL 8816859 protein-coding Cwc22 CWC22 spliceosome associated protein homolog ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955403 17070588 17125918 + 102021297 AGCD01002070;GBCE01007893;XM_005373357;XM_013512563 XP_005373414;XP_013368017 MODEL 8719040 protein-coding Gpr22 G protein-coupled receptor 22 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 11841813 11849441 + 102004576 AGCD01010835;XM_013510539;XM_013510540 XP_013365993;XP_013365994 MODEL 8800159 protein-coding Derl1 derlin 1 ENCODES a protein that exhibits ATPase binding (ortholog); identical protein binding (ortholog); MHC class I protein binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); cellular response to unfolded protein (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH Stevens-Johnson syndrome (ortholog); FOUND IN Derlin-1 retrotranslocation complex (ortholog); Derlin-1-VIMP complex (ortholog); early endosome (ortholog) NW_004955540 1918230 1944186 - 102025511 AGCD01071308;GBCE01054838;XM_005410910 XP_005410967 MODEL 8955221 pseudo LOC102009469 non-POU domain-containing octamer-binding protein pseudogene NW_004955458 11867254 11868199 - 102009469 AGCD01047762 MODEL 8710396 pseudo LOC102005447 rho-associated protein kinase 1-like NW_004955459 1724049 1732649 + 102005447 AGCD01047977 MODEL 8892359 protein-coding Elp1 elongator acetyltransferase complex subunit 1 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); INVOLVED IN I-kappaB phosphorylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Charcot-Marie-Tooth disease (ortholog); Gaucher's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955419 18035197 18097681 + 102020672 AGCD01020168;GBDF01196206;XM_005382757;XM_013513174 XP_005382814;XP_013368628 MODEL 9034501 ncrna LOC102009472 uncharacterized LOC102009472 NW_004955462 1145564 1150883 - 102009472 AGCD01049102;AGCD01049103;GBDF01041427;XR_263087 MODEL 10340989 protein-coding Gpr25 G protein-coupled receptor 25 ENCODES a protein that exhibits C-X-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); leukocyte chemotaxis (ortholog); lymphocyte chemotaxis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 37065511 37066771 + 106150185 AGCD01006571;GBBH01145319;XM_013522068 XP_013377522 MODEL 8950942 protein-coding Crtam cytotoxic and regulatory T cell molecule ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell recognition (ortholog); detection of stimulus (ortholog); FOUND IN immunological synapse (ortholog); plasma membrane (ortholog) NW_004955412 23676171 23706250 + 102018070 AGCD01013092;GBDF01021719;XM_005378367 XP_005378424 MODEL 8783574 protein-coding Derl2 derlin 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signal recognition particle binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955467 10824922 10837408 - 102012520 AGCD01051585;AGCD01051586;GBCC01027755;GBDI01134494;XM_013522214 XP_013377668 MODEL 8748366 protein-coding Cwc25 CWC25 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); U2-type catalytic step 1 spliceosome (ortholog) NW_004955451 13867570 13884433 - 102019657 AGCD01043509;AGCD01043510;AGCD01043511;AGCD01043512;GBDJ01004357;XM_005394284 XP_005394341 MODEL 8765624 protein-coding Elp2 elongator acetyltransferase complex subunit 2 ENCODES a protein that exhibits protein kinase binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN regulation of receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 48 (ortholog); autosomal recessive intellectual developmental disorder 58 (ortholog); FOUND IN cytosol (ortholog); elongator holoenzyme complex (ortholog); nucleoplasm (ortholog) NW_004955402 22698817 22742691 + 102009129 AGCD01000609;AGCD01000610;GBDF01125422;XM_005372807;XM_005372808 XP_005372864;XP_005372865 MODEL 8716548 protein-coding LOC102005449 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 10831510 10832892 + 102005449 AGCD01048617;XM_013521142 XP_013376596 MODEL 8964898 protein-coding Derl3 derlin 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signal recognition particle binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955455 8415868 8418753 + 102010869 AGCD01045891;GBDI01131857;XM_005396416;XM_005396417 XP_005396473;XP_005396474 MODEL 8799081 ncrna LOC102009475 uncharacterized LOC102009475 NW_004955463 254981 270114 + 102009475 AGCD01049479;GBDF01303373;XR_263138 MODEL 8917395 protein-coding LOC102007561 vomeronasal type-1 receptor 48-like NW_004955421 21854981 21855904 - 102007561 AGCD01022122;XM_005383930 XP_005383987 MODEL 8756979 ncrna LOC102020478 uncharacterized LOC102020478 NW_004955432 13175096 13183461 + 102020478 AGCD01031006;GBDF01194976;XR_261525 MODEL 8925499 ncrna LOC102011004 uncharacterized LOC102011004 NW_004955418 480761 481468 + 102011004 AGCD01018677;GBDK01046238;XR_260530 MODEL 9055647 ncrna LOC102010236 uncharacterized LOC102010236 NW_004955465 1021083 1041695 - 102010236 AGCD01050329;GBDF01287130;XR_263230 MODEL 8880582 protein-coding LOC102008337 olfactory receptor 1030 NW_004955511 1667797 1668753 - 102008337 AGCD01066377;XM_005407970 XP_005408027 MODEL 9047464 protein-coding Amt aminomethyltransferase ENCODES a protein that exhibits aminomethyltransferase activity (ortholog); INVOLVED IN glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Acidoses (ortholog); genetic disease (ortholog); glycine encephalopathy (ortholog); FOUND IN mitochondrion (ortholog) NW_004955532 1351743 1358220 - 102013210 AGCD01070179;AGCD01070180;GBCE01187398;XM_005410201 XP_005410258 MODEL 8707116 protein-coding Bpifb6 BPI fold containing family B member 6 NW_004955422 28214188 28224604 - 102004396 AGCD01023345;GBDF01181601;XM_005384854 XP_005384911 MODEL 39131976 rrna 5S_rRNA 5S ribosomal RNA 39133858 misc_rna 7SK 7SK RNA 8962343 protein-coding Coq9 coenzyme Q9 ENCODES a protein that exhibits enzyme activator activity (ortholog); isoprenoid binding (ortholog); lipid binding (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); coenzyme Q10 deficiency disease (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955433 15081390 15094441 + 102026784 AGCD01031745;GBDF01054028;XM_005388389 XP_005388446 MODEL 8867938 protein-coding LOC102009091 late lactation protein B-like NW_004955513 2501589 2504529 + 102009091 AGCD01066880;GBBH01002386;XM_013506585 XP_013362039 MODEL 8988956 ncrna LOC102003665 uncharacterized LOC102003665 NW_004955422 25513884 25522156 + 102003665 AGCD01023251;GBDF01153136;XR_260914 MODEL 8765030 protein-coding Iba57 iron-sulfur cluster assembly factor IBA57 PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 74 (ortholog); microcephaly (ortholog); FOUND IN mitochondrion (ortholog) NW_004955581 284488 289225 - 102013985 AGCD01075665;GBBH01185484;XM_005414235 XP_005414292 MODEL 8732503 protein-coding Cwc27 CWC27 spliceosome associated cyclophilin ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Metaphyseal Chondrodysplasia with Retinitis Pigmentosa (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955446 4032493 4230444 - 102022030 AGCD01040031;AGCD01040032;AGCD01040033;AGCD01040034;GBDI01292969;XM_005392634;XM_013518444 XP_005392691;XP_013373898 MODEL 8871338 protein-coding Fbxl13 F-box and leucine rich repeat protein 13 NW_004955410 8013418 8202826 - 102013480 AGCD01010731;AGCD01010732;AGCD01010733;AGCD01010734;AGCD01010735;AGCD01010736;GBDF01046833;XM_013510514;XM_013510515;XM_013510516;XM_013510517;XM_013510518 XP_013365968;XP_013365969;XP_013365970;XP_013365971;XP_013365972 MODEL 39131979 rrna 5S_rRNA 5S ribosomal RNA 9022021 protein-coding Ephb4 EPH receptor B4 ENCODES a protein that exhibits ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH arteriovenous malformation (ortholog); Breast Neoplasms (ortholog); cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955573 132328 150879 + 102012701 AGCD01074964;GBDK01146486;XM_005413688;XM_013509481 XP_005413745;XP_013364935 MODEL 8897593 protein-coding Gpr26 G protein-coupled receptor 26 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog) NW_004955477 1769585 1789838 + 102027405 AGCD01055509;AGCD01055510;XM_005401962 XP_005402019 MODEL 8731550 protein-coding LOC102015607 olfactory receptor 6C65 NW_004955458 2796704 2797642 + 102015607 AGCD01047244;XM_005397245 XP_005397302 MODEL 8909018 ncrna LOC102012980 uncharacterized LOC102012980 NW_004955426 6108020 6117151 - 102012980 AGCD01026144;GBCE01090878;XR_001234326;XR_261191 MODEL 8786494 protein-coding Crtap cartilage associated protein INVOLVED IN negative regulation of post-translational protein modification (ortholog); peptidyl-proline hydroxylation to 3-hydroxy-L-proline (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); osteogenesis imperfecta (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955421 384668 408214 + 102017243 AGCD01021560;GBCE01028694;XM_005383636 XP_005383693 MODEL 9012513 pseudo LOC102011829 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955402 1161682 1162083 - 102011829 AGCD01000049;XM_005373139 MODEL 9051398 protein-coding LOC102015980 vomeronasal type-2 receptor 116-like NW_004955524 4322863 4376791 - 102015980 AGCD01068967;AGCD01068968;AGCD01068969;AGCD01068970;AGCD01068971;XM_013507206 XP_013362660 MODEL 8916145 pseudo LOC102013370 serine/Arginine-related protein 53 pseudogene NW_004955403 40310550 40311721 - 102013370 AGCD01002680;XM_005373899 MODEL 8887956 ncrna LOC102008711 uncharacterized LOC102008711 NW_004955467 9917224 9927059 + 102008711 AGCD01051535;GBDF01226367;XR_001236854;XR_001236855 MODEL 8814490 protein-coding Efcab2 EF-hand calcium binding domain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955406 8115813 8239352 + 102017303 AGCD01005792;AGCD01005793;AGCD01005794;AGCD01005795;AGCD01005796;AGCD01005797;AGCD01005798;AGCD01005799;AGCD01005800;AGCD01005801;GBBH01131572;GBCE01162934;XM_013520411 XP_013375865 MODEL 8972400 protein-coding LOC102012646 uncharacterized LOC102012646 NW_004955416 14157382 14202260 + 102012646 AGCD01017243;AGCD01017244;AGCD01017245;AGCD01017246;GBCQ01192362;XM_013512420 XP_013367874 MODEL 8843566 protein-coding Amtn amelotin INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 3A (ortholog); amelogenesis imperfecta type 3B (ortholog); FOUND IN basement membrane (ortholog); cell-cell junction (ortholog); extracellular matrix (ortholog) NW_004955447 2422189 2433633 - 102027025 AGCD01040542;XM_013518488 XP_013373942 MODEL 39132211 rrna 5S_rRNA 5S ribosomal RNA 39133859 misc_rna 7SK 7SK RNA 9026177 protein-coding LOC102014501 olfactory receptor 4Q2 NW_004955550 370124 371077 - 102014501 AGCD01072495;XM_005412031 XP_005412088 MODEL 8734292 ncrna LOC102011385 uncharacterized LOC102011385 NW_004955403 10477798 10481600 + 102011385 AGCD01001922;GBDF01013779;XR_259170 MODEL 8864225 protein-coding LOC102020132 aldo-keto reductase family 1 member B10 NW_004955494 7924412 7928689 - 102020132 AGCD01061558;XM_005405509 XP_005405566 MODEL 8777765 protein-coding Kbtbd8 kelch repeat and BTB domain containing 8 INVOLVED IN neural crest cell development (ortholog); neural crest formation (ortholog); protein monoubiquitination (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) NW_004955421 20685884 20698409 - 102015529 AGCD01022094;GBDF01085805;XM_005383820 XP_005383877 MODEL 8871374 ncrna LOC102016366 uncharacterized LOC102016366 NW_004955468 1099889 1103210 + 102016366 AGCD01051756;GBDF01038914;XR_263373 MODEL 8892021 protein-coding Itga8 integrin subunit alpha 8 INVOLVED IN cell-matrix adhesion (ortholog); establishment of protein localization (ortholog); extracellular matrix organization (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; glomerulonephritis pathway; integrin mediated signaling pathway; ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); end stage renal disease (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); dendritic spine membrane (ortholog) NW_004955429 11932764 12120757 + 102004096 AGCD01028697;AGCD01028698;AGCD01028699;AGCD01028700;AGCD01028701;AGCD01028702;GBDF01141385;XM_005386975 XP_005387032 MODEL 8820361 ncrna LOC102009476 uncharacterized LOC102009476 NW_004955463 10007303 10028051 - 102009476 AGCD01049804;AGCD01049805;GBDF01223582;XR_263166 MODEL 8880245 protein-coding Il11ra interleukin 11 receptor subunit alpha ENCODES a protein that exhibits interleukin-11 binding (ortholog); interleukin-11 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); decidualization (ortholog); developmental process (ortholog); ASSOCIATED WITH Craniosynostosis and Dental Anomalies (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); Heat Stroke (ortholog) NW_004955472 1474802 1485352 - 102021002 AGCD01053395;GBBH01063003;XM_005401045;XM_013523015;XM_013523016;XM_013523017;XM_013523018 XP_005401102;XP_013378469;XP_013378470;XP_013378471;XP_013378472 MODEL 8977021 ncrna LOC102013735 uncharacterized LOC102013735 NW_004955500 6046786 6051828 - 102013735 AGCD01063867;GBCB01052384;XR_264231 MODEL 8705779 protein-coding LOC102007563 uncharacterized LOC102007563 NW_004955493 470268 489066 - 102007563 AGCD01060852;AGCD01060853;AGCD01060854;GBDJ01366389;XM_013504742 XP_013360196 MODEL 8964392 protein-coding LOC102024339 E3 ubiquitin-protein ligase TRIM38-like NW_004955483 1042352 1060507 - 102024339 AGCD01057639;GBBH01115170;XM_005403321;XM_005403322;XM_005403323 XP_005403378;XP_005403379;XP_005403380 MODEL 8912805 ncrna LOC102011005 uncharacterized LOC102011005 NW_004955418 27966614 27993848 - 102011005 AGCD01019421;AGCD01019422;GBDF01041994;XR_260587;XR_260588 MODEL 39134416 misc_rna 7SK 7SK RNA 8798051 protein-coding Abcd2 ATP binding cassette subfamily D member 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); fatty acid biosynthetic process (ortholog); myelin maintenance (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); hypothyroidism (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955505 717800 769702 + 102028992 AGCD01064961;GBDF01177037;XM_005407101 XP_005407158 MODEL 8959420 pseudo LOC102017524 40S ribosomal protein S2 pseudogene NW_004955451 137996 138829 + 102017524 AGCD01042920 MODEL 8703607 protein-coding LOC102007969 maestro heat-like repeat-containing protein family member 7 NW_004955406 37107660 37135900 + 102007969 AGCD01006571;GBDF01021853;XM_013522084 XP_013377538 MODEL 8776912 ncrna LOC102005450 uncharacterized LOC102005450 NW_004955409 37458586 37465397 - 102005450 AGCD01010520;GBDJ01346495;XR_001232672;XR_259810 MODEL 9064031 ncrna LOC102021596 uncharacterized LOC102021596 NW_004955541 3430941 3433438 - 102021596 AGCD01071448;GBBH01213905;XR_001232138 MODEL 10210341 protein-coding Ctu1 cytosolic thiouridylase subunit 1 ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog) NW_004955558 959819 960369 - 106147428 AGCD01073408;GBCQ01013477;GBDI01384051;XM_013508884 XP_013364338 MODEL 8941654 protein-coding Chrna4 cholinergic receptor nicotinic alpha 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); B cell activation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) NW_004955528 825314 840994 + 102015046 AGCD01069547;GBDJ01273817;XM_005409981 XP_005410038 MODEL 8914153 protein-coding Ibsp integrin binding sialoprotein ENCODES a protein that exhibits integrin binding (ortholog); small molecule binding (ortholog); INVOLVED IN bone mineralization (ortholog); cell adhesion (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Neoplasm Metastasis (ortholog); Osteolysis (ortholog); FOUND IN extracellular space (ortholog); vesicle (ortholog) NW_004955474 2074659 2086289 - 102013823 AGCD01054275;GBCE01002013;XM_005401333;XM_013502793 XP_005401390;XP_013358247 MODEL 39131980 rrna 5S_rRNA 5S ribosomal RNA 8967697 protein-coding Cwf19l1 CWF19 like cell cycle control factor 1 ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 17 (ortholog); genetic disease (ortholog); intellectual disability (ortholog) NW_004955507 6106245 6136305 - 102021153 AGCD01065697;GBCQ01175305;XM_005407687;XM_005407688;XM_013506212;XM_013506213 XP_005407744;XP_005407745;XP_013361666;XP_013361667 MODEL 8713442 ncrna LOC102014505 uncharacterized LOC102014505 NW_004955568 879303 891710 + 102014505 AGCD01074526;GBDF01226190;XR_265039 MODEL 8846541 protein-coding LOC102015212 guanine nucleotide-binding protein-like 1 NW_004955494 7475377 7475985 + 102015212 AGCD01061553;GBCQ01041918;GBDI01007809;XM_013504939 XP_013360393 MODEL 10098298 protein-coding Gpr27 G protein-coupled receptor 27 INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955421 16352643 16353094 - 106148423 AGCD01021998;GBCE01104270;GBDJ01170215;XM_013513673 XP_013369127 MODEL 8873637 protein-coding Dock7 dedicator of cytokinesis 7 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN axonogenesis (ortholog); establishment of neuroblast polarity (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 23 (ortholog); epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN COP9 signalosome (ortholog); neuromuscular junction (ortholog) NW_004955423 27043621 27233710 + 102010707 AGCD01024113;AGCD01024114;AGCD01024115;AGCD01024116;GBCB01098443;XM_013514367 XP_013369821 MODEL 8728037 protein-coding Ephb6 EPH receptor B6 INVOLVED IN activated T cell proliferation (ortholog); positive regulation of T cell costimulation (ortholog); T cell mediated immunity (ortholog); ASSOCIATED WITH malaria (ortholog); myoepithelioma (ortholog); FOUND IN cell surface (ortholog) NW_004955494 812482 820679 + 102003560 AGCD01061385;GBDF01008198;XM_005405381;XM_005405383;XM_013505009;XM_013505010;XM_013505011;XM_013505012 XP_005405438;XP_005405440;XP_013360463;XP_013360464;XP_013360465;XP_013360466 MODEL 8788402 protein-coding LOC102010238 olfactory receptor 151 NW_004955412 25594862 25595791 + 102010238 AGCD01013161;XM_005378427 XP_005378484 MODEL 9057953 pseudo LOC102012982 60S ribosomal protein L5 pseudogene NW_004955503 7021624 7022501 - 102012982 AGCD01064776 MODEL 8758171 protein-coding LOC102011830 leucine-rich repeat-containing protein 37A3-like NW_004955651 5178 17838 + 102011830 AGCD01077802;AGCD01077803;AGCD01077804;AGCD01077805;AGCD01077806;AGCD01077807;AGCD01077808;GBDF01009797;XM_013510174 XP_013365628 MODEL 8942349 protein-coding LOC102014103 cytochrome P450 2B5-like NW_004955813 9300 18593 - 102014103 AGCD01078398;AGCD01078399;AGCD01078400;XM_005415120;XM_005415121 XP_005415177;XP_005415178 MODEL 8933022 protein-coding Bpifc BPI fold containing family C NW_004955405 41376471 41403410 - 102028820 AGCD01005549;GBCC01004323;GBDI01161130;XM_013519152 XP_013374606 MODEL 9055654 protein-coding Elp3 elongator acetyltransferase complex subunit 3 ENCODES a protein that exhibits acetyltransferase activity (ortholog); INVOLVED IN central nervous system development (ortholog); neuron migration (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Animal Disease Models (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955403 50565496 50635226 + 102011270 AGCD01002967;GBDF01124985;XM_005373765;XM_005373767 XP_005373822;XP_005373824 MODEL 8880790 protein-coding Il12a interleukin 12A ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-12 beta subunit binding (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); Chronic Hepatitis B (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955448 10611131 10617911 + 102022032 AGCD01041496;GBCE01162263;GBDK01148444;XM_005393161 XP_005393218 MODEL 8882174 pseudo LOC102020867 actin-related protein 2/3 complex subunit 3 pseudogene NW_004955623 105619 112426 + 102020867 AGCD01077410;AGCD01077411 MODEL 8957073 protein-coding Hpca hippocalcin ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to calcium ion (ortholog); cellular response to electrical stimulus (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); Huntington's disease (ortholog); isolated growth hormone deficiency (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955452 11142282 11150798 + 102003511 AGCD01044328;GBDF01147911;XM_005395099;XM_005395100 XP_005395156;XP_005395157 MODEL 8789674 protein-coding LOC102003666 dnaJ homolog subfamily B member 6-like NW_004955423 9538198 9539071 - 102003666 AGCD01023662;GBDF01008801;XM_013514572 XP_013370026 MODEL 39131523 protein-coding FBXL14 F-box and leucine rich repeat protein 14 39132213 rrna 5S_rRNA 5S ribosomal RNA 8994995 protein-coding LOC102012648 galectin-9-like NW_004955481 5681486 5685579 - 102012648 AGCD01057000;XM_005402781 XP_005402838 MODEL 8739978 protein-coding LOC102007971 keratin-associated protein 20-2-like NW_004955407 30174961 30175134 + 102007971 AGCD01007628;XM_005375643 XP_005375700 MODEL 8851335 protein-coding Dcp1a decapping mRNA 1A ENCODES a protein that exhibits identical protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN mRNA methylguanosine-cap decapping (ortholog); protein localization to cytoplasmic stress granule (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); dendrite (ortholog) NW_004955430 3225840 3284058 - 102004100 AGCD01029199;GBDF01225893;XM_005387374;XM_013515611 XP_005387431;XP_013371065 MODEL 39133860 misc_rna 7SK 7SK RNA 8711803 protein-coding Corin corin, serine peptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN female pregnancy (ortholog); peptide hormone processing (ortholog); regulation of blood pressure (ortholog); PARTICIPATES IN atrial natriuretic peptide signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955443 721655 970600 + 102027350 AGCD01038119;AGCD01038120;AGCD01038121;AGCD01038122;AGCD01038123;AGCD01038124;AGCD01038125;AGCD01038126;AGCD01038127;GBDJ01377729;XM_005391890;XM_013518121;XM_013518122 XP_005391947;XP_013373575;XP_013373576 MODEL 9052734 protein-coding Amz1 archaelysin family metallopeptidase 1 NW_004955460 12631296 12649891 - 102011846 AGCD01048661;GBCE01079732;XM_013521144;XM_013521145;XM_013521146;XM_013521147 XP_013376598;XP_013376599;XP_013376600;XP_013376601 MODEL 8756984 ncrna LOC102020482 uncharacterized LOC102020482 NW_004955436 4142905 4148903 + 102020482 AGCD01033656;GBDF01080390;XR_001234921 MODEL 10218798 pseudo LOC106149891 cysteine and histidine-rich domain-containing protein 1-like NW_004955456 13702594 13703373 - 106149891 AGCD01046612 MODEL 39132214 rrna 5S_rRNA 5S ribosomal RNA 39133861 misc_rna 7SK 7SK RNA 9026124 ncrna LOC102009092 uncharacterized LOC102009092 NW_004955431 13020164 13023563 + 102009092 AGCD01030276;GBDF01210949;XR_261468 MODEL 8998317 pseudo LOC102024342 60S ribosomal protein L17 pseudogene NW_004955484 3330331 3330824 - 102024342 AGCD01058175 MODEL 8988258 protein-coding LOC102007567 uncharacterized LOC102007567 NW_004955494 1182666 1184612 - 102007567 AGCD01061392;GBDI01027077;XM_005405391 XP_005405448 MODEL 39134417 misc_rna 7SK 7SK RNA 8793199 pseudo LOC102013371 40S ribosomal protein S3a pseudogene NW_004955451 12173170 12175229 - 102013371 AGCD01043377 MODEL 8844229 protein-coding LOC102019053 olfactory receptor 51A7-like NW_004955414 20454679 20455620 + 102019053 AGCD01015375;XM_005380057 XP_005380114 MODEL 9000276 protein-coding LOC102017526 uncharacterized LOC102017526 NW_004955844 877 5035 + 102017526 AGCD01078475;AGCD01078476;GBDK01121913;XM_005415129 XP_005415186 MODEL 9045847 protein-coding Des desmin ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN intermediate filament organization (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 9 (ortholog); FOUND IN cardiac myofibril (ortholog); cell tip (ortholog); cell-cell junction (ortholog) NW_004955453 14039502 14046572 - 102006976 AGCD01044857;GBDK01160362;XM_005395527 XP_005395584 MODEL 9052854 ncrna LOC102014104 uncharacterized LOC102014104 NW_004955403 40326703 40371419 - 102014104 AGCD01002681;AGCD01002682;AGCD01002683;GBBH01144739;XR_259234 MODEL 8740336 protein-coding LOC102008712 oxidized low-density lipoprotein receptor 1 NW_004955413 7662314 7721687 + 102008712 AGCD01013828;AGCD01013829;AGCD01013830;GBDF01111532;XM_005378938 XP_005378995 MODEL 8869555 protein-coding LOC102011387 serine/threonine-protein phosphatase with EF-hands 2-like NW_004955797 7064 18498 + 102011387 AGCD01078368;GBCQ01026990;GBDJ01093079;XM_013510194 XP_013365648 MODEL 8765178 protein-coding LOC102020133 39S ribosomal protein L47, mitochondrial-like NW_004955423 1553573 1554480 + 102020133 AGCD01023442;XM_005385038 XP_005385095 MODEL 8806603 pseudo LOC102012649 pre-mRNA-splicing factor SLU7 pseudogene NW_004955481 9058890 9071635 + 102012649 AGCD01057094 MODEL 8748319 pseudo LOC102015986 60S ribosomal protein L17 pseudogene NW_004955441 7018031 7018593 - 102015986 AGCD01036947 MODEL 8945647 protein-coding LOC102008338 olfactory receptor 5W2-like NW_004955511 810336 811271 + 102008338 AGCD01066344;XM_005408211 XP_005408268 MODEL 9049102 pseudo LOC102009479 60S ribosomal protein L26-like NW_004955466 1763067 1764140 + 102009479 AGCD01050717 MODEL 9019357 protein-coding Chrna5 cholinergic receptor nicotinic alpha 5 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral response to nicotine (ortholog); cellular response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) NW_004955450 945400 974129 + 102012488 AGCD01042346;GBBH01226333;XM_005393456;XM_005393457;XM_013518824;XM_013518825 XP_005393513;XP_005393514;XP_013374278;XP_013374279 MODEL 8930587 ncrna LOC102013737 uncharacterized LOC102013737 NW_004955426 6400851 6492632 + 102013737 AGCD01026156;AGCD01026157;GBDF01164186;XR_001234306;XR_261193 MODEL 8897573 protein-coding Fbxl14 F-box and leucine rich repeat protein 14 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) NW_004955454 4133718 4137363 - 102024759 AGCD01045114;AGCD01045115;AGCD01045116;GBCQ01152982;GBDI01222013;XM_005395950 XP_005396007 MODEL 8863651 protein-coding Amz2 archaelysin family metallopeptidase 2 ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955478 4477597 4485918 - 102029394 AGCD01055851;GBCQ01064160;XM_005402126;XM_005402131;XM_013503246;XM_013503247;XM_013503248;XM_013503249 XP_005402183;XP_005402188;XP_013358700;XP_013358701;XP_013358702;XP_013358703 MODEL 8984664 pseudo LOC102012983 charged multivesicular body protein 3-like NW_004955427 345772 346720 + 102012983 AGCD01026828 MODEL 8778322 pseudo LOC102011831 nuclear receptor-binding factor 2 pseudogene NW_004957988 521 1128 + 102011831 AGCD01081384 MODEL 8916007 ncrna LOC102009480 uncharacterized LOC102009480 NW_004955412 20745073 20752832 + 102009480 AGCD01013012;AGCD01013013;GBDF01262373;XR_001232926;XR_260006 MODEL 9014073 protein-coding LOC102021597 alpha-1-antiproteinase S-like ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN negative regulation of serine-type endopeptidase activity (ortholog); response to chromate (ortholog); response to cytokine (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH otitis media; Otitis Media with Effusion; acute kidney failure (ortholog); FOUND IN extracellular space; endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955438 17920200 17929105 + 102021597 AGCD01035456;GBDF01154079;XM_005390393 XP_005390450 MODEL 8762091 protein-coding Efcab3 EF-hand calcium binding domain 3 NW_004955478 9284421 9778849 - 102009052 AGCD01056061;AGCD01056062;AGCD01056063;AGCD01056064;AGCD01056065;AGCD01056066;AGCD01056067;AGCD01056068;AGCD01056069;AGCD01056070;AGCD01056071;AGCD01056072;AGCD01056073;AGCD01056074;AGCD01056075;AGCD01056076;AGCD01056077;AGCD01056078;AGCD01056079;AGCD01056080;AGCD01056081;AGCD01056082;AGCD01056083;AGCD01056084;AGCD01056085;AGCD01056086;AGCD01056087;AGCD01056088;AGCD01056089;AGCD01056090;AGCD01056091;AGCD01056092;AGCD01056093;AGCD01056094;AGCD01056095;AGCD01056096;AGCD01056097;GBDK01169061;XM_005402243;XM_005402244;XM_005402245;XM_005402246;XM_005402247 XP_005402300;XP_005402301;XP_005402302;XP_005402303;XP_005402304 MODEL 8755682 protein-coding LOC102015610 dehydrogenase/reductase SDR family member 2, mitochondrial-like NW_004955409 36455963 36470704 - 102015610 AGCD01010462;AGCD01010463;GBDJ01240364;XM_013510424 XP_013365878 MODEL 8747700 protein-coding LOC102016368 vomeronasal type-2 receptor 26-like NW_004955413 5213370 5228381 - 102016368 AGCD01013656;AGCD01013657;AGCD01013658;XM_013511289 XP_013366743 MODEL 8783171 protein-coding Hpcal1 hippocalcin like 1 INVOLVED IN liver development (ortholog); ASSOCIATED WITH cataract 13 with adult i phenotype (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955487 5546795 5601489 + 102028303 AGCD01059340;AGCD01059341;GBDF01084681;XM_005404408;XM_005404409 XP_005404465;XP_005404466 MODEL 39131981 rrna 5S_rRNA 5S ribosomal RNA 8791564 protein-coding Itga9 integrin subunit alpha 9 ENCODES a protein that exhibits collagen binding (ortholog); integrin binding involved in cell-matrix adhesion (ortholog); laminin binding (ortholog); INVOLVED IN cell adhesion (ortholog); negative regulation of vasoconstriction (ortholog); neutrophil chemotaxis (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH cerebral infarction (ortholog); congenital chylothorax (ortholog); hypertension (ortholog); FOUND IN basal plasma membrane (ortholog); integrin alpha9-beta1 complex (ortholog) NW_004955421 4331053 4663101 + 102028762 AGCD01021690;AGCD01021691;AGCD01021692;AGCD01021693;AGCD01021694;AGCD01021695;AGCD01021696;GBBH01222011;GBDK01193627;XM_013513777 XP_013369231 MODEL 8942043 protein-coding Crtc1 CREB regulated transcription coactivator 1 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); INVOLVED IN energy homeostasis (ortholog); entrainment of circadian clock by photoperiod (ortholog); memory (ortholog); ASSOCIATED WITH esophagus adenocarcinoma (ortholog); major depressive disorder (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955524 2884654 2940601 - 102029324 AGCD01068843;AGCD01068844;AGCD01068845;GBCE01046058;XM_005409593;XM_005409594;XM_013507306;XM_013507307 XP_005409650;XP_005409651;XP_013362760;XP_013362761 MODEL 39134116 misc_rna 7SK 7SK RNA 39132215 rrna 5S_rRNA 5S ribosomal RNA 9025242 protein-coding LOC102011388 cytochrome P450 2D16-like NW_004956190 7085 8242 + 102011388 AGCD01079215;GBCQ01011641;GBDK01146022;XM_005415175 XP_005415232 MODEL 8882860 protein-coding Abcd3 ATP binding cassette subfamily D member 3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); congenital bile acid synthesis defect 5 (ortholog); Zellweger syndrome (ortholog); FOUND IN mitochondrion (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) NW_004955423 280497 359711 - 102008743 AGCD01023411;GBCB01039248;XM_005384998 XP_005385055 MODEL 8717710 protein-coding Gpr3 G protein-coupled receptor 3 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger (ortholog); negative regulation of cell cycle (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); plasma membrane (ortholog) NW_004955452 6648470 6651938 + 102004233 AGCD01044118;GBDF01030401;XM_005394907;XM_005394908 XP_005394964;XP_005394965 MODEL 8880737 ncrna LOC102019055 uncharacterized LOC102019055 NW_004955414 24422049 24443415 + 102019055 AGCD01015546;GBDF01207599;XR_260194 MODEL 8820311 ncrna LOC102008342 uncharacterized LOC102008342 NW_004955432 20887908 20912192 - 102008342 AGCD01031210;GBDF01207508;XR_261537 MODEL 8942983 pseudo LOC102010239 mortality factor 4-like protein 1 pseudogene NW_004955412 28163408 28164375 + 102010239 AGCD01013249 MODEL 8884636 pseudo LOC102009093 60S ribosomal protein L5-like NW_004955431 17585076 17587986 - 102009093 AGCD01030409 MODEL 8765970 pseudo LOC102020868 growth factor receptor-bound protein 10-like NW_004955403 23021737 23022670 + 102020868 AGCD01002238 MODEL 8764029 protein-coding Elp4 elongator acetyltransferase complex subunit 4 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH aniridia (ortholog); aniridia 1 (ortholog); Aniridia 2 (ortholog); FOUND IN cytoplasm (ortholog); elongator holoenzyme complex (ortholog); nucleoplasm (ortholog) NW_004955476 9850110 10054313 + 102025238 AGCD01055400;AGCD01055401;AGCD01055402;AGCD01055403;AGCD01055404;AGCD01055405;AGCD01055406;AGCD01055407;GBDF01160723;XM_005401773;XM_005401774 XP_005401830;XP_005401831 MODEL 9005915 protein-coding Dcp1b decapping mRNA 1B INVOLVED IN cellular response to interleukin-17 (ortholog); protein localization to nucleus (ortholog); protein localization to P-body (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); P-body (ortholog) NW_004955454 4464399 4518613 - 102028378 AGCD01045122;AGCD01045123;GBCE01085759;XM_005395964;XM_013520130;XM_013520131;XM_013520132 XP_005396021;XP_013375584;XP_013375585;XP_013375586 MODEL 8868627 protein-coding Kcmf1 potassium channel modulatory factor 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN HRI-mediated signaling (ortholog); negative regulation of HRI-mediated signaling (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955424 2348170 2412488 - 102007570 AGCD01024277;AGCD01024278;GBDI01216420;XM_005385444;XM_005385445;XM_013514687;XM_013514688;XM_013514689 XP_005385501;XP_005385502;XP_013370141;XP_013370142;XP_013370143 MODEL 8807488 pseudo LOC102014108 40S ribosomal protein SA-like NW_004955405 2910163 2917915 + 102014108 AGCD01004627 MODEL 8828788 protein-coding LOC102011006 olfactory receptor 2T11 NW_004955418 30157574 30163444 - 102011006 AGCD01019506;XM_005382367 XP_005382424 MODEL 8904647 protein-coding LOC102014509 translation initiation factor IF-2-like NW_004955583 384914 394866 - 102014509 AGCD01075816;GBCE01119296;XM_013509784;XM_013509785;XM_013509786;XM_013509787;XM_013509788;XM_013509789;XM_013509790;XR_001232495;XR_001232496;XR_001232497;XR_001232498 XP_013365238;XP_013365239;XP_013365240;XP_013365241;XP_013365242;XP_013365243;XP_013365244 MODEL 9046916 protein-coding Coro1a coronin 1A ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); coronin-1A deficiency (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); axon (ortholog) NW_004955493 6815148 6820295 - 102020927 AGCD01061141;GBBH01001010;GBBH01150340;XM_005405184 XP_005405241 MODEL 8828714 pseudo LOC102005452 protein kinase C iota type pseudogene NW_004955411 3980164 3982123 - 102005452 AGCD01011566 MODEL 10128276 protein-coding LOC106149892 uncharacterized LOC106149892 NW_004955456 13688948 13689350 + 106149892 AGCD01046610;GBCE01022193;XM_013520620 XP_013376074 MODEL 39133862 misc_rna 7SK 7SK RNA 8822420 pseudo LOC102007568 calcyclin-binding protein pseudogene NW_004955495 2910765 2911344 - 102007568 AGCD01061810 MODEL 8743980 protein-coding Ephx1 epoxide hydrolase 1 ENCODES a protein that exhibits cis-stilbene-oxide hydrolase activity (ortholog); enzyme binding (ortholog); epoxide hydrolase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cellular response to glucocorticoid stimulus (ortholog); diol biosynthetic process (ortholog); PARTICIPATES IN carbamazepine pharmacokinetics pathway; phenytoin pharmacodynamics pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN membrane (ortholog) NW_004955520 116363 142983 - 102004192 AGCD01068006;AGCD01068007;AGCD01068008;GBBH01000987;GBDI01022276;XM_013507052 XP_013362506 MODEL 8821811 protein-coding Efcab5 EF-hand calcium binding domain 5 NW_004955481 3207789 3381228 - 102009176 AGCD01056895;AGCD01056896;AGCD01056897;AGCD01056898;AGCD01056899;AGCD01056900;AGCD01056901;AGCD01056902;AGCD01056903;GBDF01088005;XM_013503350;XM_013503351;XM_013503352;XM_013503353;XM_013503354;XM_013503355 XP_013358804;XP_013358805;XP_013358806;XP_013358807;XP_013358808;XP_013358809 MODEL 8978489 protein-coding Dock8 dedicator of cytokinesis 8 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to chemokine (ortholog); dendritic cell migration (ortholog); immunological synapse formation (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); autosomal dominant intellectual developmental disorder 2 (ortholog); autosomal recessive hyper-IgE syndrome 3 with recurrent infections (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955434 4849147 5050545 + 102011693 AGCD01032172;AGCD01032173;AGCD01032174;AGCD01032175;AGCD01032176;AGCD01032177;GBBH01005459;XM_005388589;XM_013516312 XP_005388646;XP_013371766 MODEL 39134418 misc_rna 7SK 7SK RNA 8737732 protein-coding Chrna6 cholinergic receptor nicotinic alpha 6 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral response to nicotine (ortholog); membrane depolarization (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol use disorder (ortholog); cocaine abuse (ortholog); nicotine dependence (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); dopaminergic synapse (ortholog); postsynaptic membrane (ortholog) NW_004955536 166212 172551 + 102022426 AGCD01070716;AGCD01070717;XM_013507721 XP_013363175 MODEL 8884017 pseudo LOC102017527 histone-binding protein RBBP4 pseudogene NW_004955403 47556881 47558928 - 102017527 AGCD01002891 MODEL 8742145 pseudo LOC102012984 small acidic protein-like NW_004955428 6319241 6325753 + 102012984 AGCD01027734 MODEL 8935804 protein-coding LOC102015213 tumor necrosis factor receptor superfamily member 26-like NW_004955422 14742490 14751804 - 102015213 AGCD01022864;GBDK01165152;XM_005384957 XP_005385014 MODEL 8817665 protein-coding Anapc1 anaphase promoting complex subunit 1 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH High Myopia (ortholog); Rothmund-Thomson Syndrome Type 1 (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) NW_004955470 2182163 2262804 + 102029282 AGCD01052673;GBDF01126892;XM_005400611;XM_005400612;XM_005400613;XM_005400614 XP_005400668;XP_005400669;XP_005400670;XP_005400671 MODEL 8737534 pseudo LOC102009482 growth hormone-inducible transmembrane protein pseudogene NW_004955466 13355054 13356148 - 102009482 AGCD01051156 MODEL 8846680 pseudo LOC102021598 leucine-rich repeat and coiled-coil domain-containing protein 1-like NW_004955439 541151 543625 + 102021598 AGCD01035585 MODEL 8889144 pseudo LOC102020485 programmed cell death protein 5 pseudogene NW_004955439 176852 177293 - 102020485 AGCD01035581 MODEL 8807400 protein-coding Ibtk inhibitor of Bruton tyrosine kinase ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of protein phosphorylation (ortholog); release of sequestered calcium ion into cytosol (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955411 10052584 10132203 - 102010347 AGCD01011770;AGCD01011771;AGCD01011772;GBDJ01272577;XM_005377680;XM_005377681;XM_005377682;XM_005377683;XM_013510860 XP_005377737;XP_005377738;XP_005377739;XP_005377740;XP_013366314 MODEL 39131982 rrna 5S_rRNA 5S ribosomal RNA 8961360 protein-coding LOC102015988 olfactory receptor 4M1 ENCODES a protein that exhibits olfactory receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); positive regulation of appetite (ortholog); FOUND IN plasma membrane (ortholog) NW_004955550 587951 588914 - 102015988 AGCD01072511;GBDF01020840;XM_005412034 XP_005412091 MODEL 8881085 protein-coding Itgad integrin subunit alpha D ENCODES a protein that exhibits cell adhesion receptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell-cell adhesion mediated by integrin (ortholog); heterotypic cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH lung adenocarcinoma (ortholog); prostate cancer (ortholog); FOUND IN integrin alphaD-beta2 complex (ortholog); plasma membrane (ortholog) NW_004955493 8233098 8260613 + 102005814 AGCD01061282;GBDF01233175;XM_013504860 XP_013360314 MODEL 39132217 rrna 5S_rRNA 5S ribosomal RNA 8943708 ncrna LOC102013376 uncharacterized LOC102013376 NW_004955453 7378233 7386961 + 102013376 AGCD01044743;GBDF01180127;XR_262716 MODEL 8785176 protein-coding Fbxl15 F-box and leucine rich repeat protein 15 INVOLVED IN bone mineralization (ortholog); G2/M transition of mitotic cell cycle (ortholog); positive regulation of BMP signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955485 7977222 7979246 - 102018401 AGCD01058684;AGCD01058685;GBBH01035377;GBDF01251761;XM_013504083 XP_013359537 MODEL 8844471 protein-coding Hpcal4 hippocalcin like 4 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN response to heat (ortholog) NW_004955452 17193505 17205174 - 102028611 AGCD01044545;GBDI01080383;XM_005395263;XM_013519650 XP_005395320;XP_013375104 MODEL 8874000 protein-coding Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 ENCODES a protein that exhibits 3'(2'),5'-bisphosphate nucleotidase activity (ortholog); inositol-1,4-bisphosphate 1-phosphatase activity (ortholog); magnesium ion binding (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrion (ortholog) NW_004955520 3521096 3543255 + 102023516 AGCD01068105;GBDF01128212;XM_005409271;XM_005409272;XM_005409273;XM_005409274;XM_005409275;XR_264596 XP_005409328;XP_005409329;XP_005409330;XP_005409331;XP_005409332 MODEL 8791839 protein-coding LOC102011839 keratin-associated protein 7-1 NW_004955407 30545079 30553536 - 102011839 AGCD01007636;GBDF01259648;XM_005375655 XP_005375712 MODEL 8923815 protein-coding LOC102003667 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7690774 7703651 - 102003667 AGCD01062160;GBDI01129621;XM_013505322;XM_013505323 XP_013360776;XP_013360777 MODEL 8937933 protein-coding Cwf19l2 CWF19 like cell cycle control factor 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); spermatogenesis (ortholog); spliceosomal complex assembly (ortholog); FOUND IN spliceosomal complex (ortholog) NW_004955412 9758751 9861019 - 102027957 AGCD01012746;AGCD01012747;AGCD01012748;AGCD01012749;GBDK01116496;XM_005378021 XP_005378078 MODEL 8924920 ncrna LOC102008719 uncharacterized LOC102008719 NW_004955474 1262389 1267127 - 102008719 AGCD01054244;AGCD01054245;GBDI01098588;XR_263586 MODEL 8786186 ncrna LOC102009094 uncharacterized LOC102009094 NW_004955432 20999224 21001060 + 102009094 AGCD01031213;GBDF01304667;XR_261541 MODEL 8888306 protein-coding Abcd4 ATP binding cassette subfamily D member 4 ENCODES a protein that exhibits ABC-type vitamin B12 transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cobalamin metabolic process (ortholog); cobalamin transport (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog); peroxisome (ortholog) NW_004955523 1170306 1181352 + 102019945 AGCD01068504;GBBH01088354;GBCE01076781;XM_013507174;XM_013507176;XM_013507177;XR_001231940 XP_013362628;XP_013362630;XP_013362631 MODEL 9067650 protein-coding LOC102020138 uncharacterized LOC102020138 NW_004955499 8106996 8114025 + 102020138 AGCD01063616;GBDF01144920;XM_005406547 XP_005406604 MODEL 8833943 pseudo LOC102015611 BUB3-interacting and GLEBS motif-containing protein ZNF207-like NW_004955409 31897502 31900908 + 102015611 AGCD01010342 MODEL 9022312 pseudo LOC102020869 bcl-2-associated transcription factor 1-like NW_004955451 8747701 8750177 + 102020869 AGCD01043278 MODEL 8889200 protein-coding Desi1 desumoylating isopeptidase 1 ENCODES a protein that exhibits deSUMOylase activity (ortholog); identical protein binding (ortholog); importin-alpha family protein binding (ortholog); INVOLVED IN protein desumoylation (ortholog); protein export from nucleus (ortholog); regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955413 27115130 27135625 - 102021117 AGCD01014495;GBDK01134746;XM_005379358;XM_005379359 XP_005379415;XP_005379416 MODEL 8800654 ncrna LOC102012650 uncharacterized LOC102012650 NW_004955418 28431582 28460778 - 102012650 AGCD01019438;AGCD01019439;GBDI01285082;XR_001233482;XR_260593 MODEL 9037759 ncrna LOC102016369 uncharacterized LOC102016369 NW_004955469 3101101 3110447 + 102016369 AGCD01052289;GBBH01172987;XR_263427 MODEL 8701900 ncrna LOC102024345 uncharacterized LOC102024345 NW_004955421 2482992 2490133 - 102024345 AGCD01021630;AGCD01021631;GBDF01236551;XR_260784 MODEL 39134117 misc_rna 7SK 7SK RNA 9056815 protein-coding Crtc2 CREB regulated transcription coactivator 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN gluconeogenesis (ortholog); glucose homeostasis (ortholog); obsolete positive regulation of CREB transcription factor activity (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 542916 554675 - 102024280 AGCD01071800;GBCQ01126602;XM_005411457;XR_001232183 XP_005411514 MODEL 8755528 protein-coding LOC102011010 steroid 17-alpha-hydroxylase/17,20 lyase ENCODES a protein that exhibits heme binding (ortholog); steroid 17-alpha-monooxygenase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); androgen biosynthetic process (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH 17,20-Lyase Deficiency, Isolated (ortholog); amenorrhea (ortholog); breast cancer (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); endoplasmic reticulum (ortholog) NW_004955485 7615132 7652899 + 102011010 AGCD01058665;AGCD01058666;AGCD01058667;AGCD01058668;AGCD01058669;GBDF01163210;XM_005403822 XP_005403879 MODEL 8736703 protein-coding Kcna1 potassium voltage-gated channel subfamily A member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); disordered domain specific binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN axon development (ortholog); brain development (ortholog); cell communication by electrical coupling (ortholog); ASSOCIATED WITH epilepsy (ortholog); epilepsy with generalized tonic-clonic seizures (ortholog); episodic ataxia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); axon initial segment (ortholog) NW_004955413 2703030 2711612 + 102006996 AGCD01013558;GBCB01010909;XM_005378744 XP_005378801 MODEL 9008699 ncrna LOC102007974 uncharacterized LOC102007974 NW_004955462 12999013 13022290 + 102007974 AGCD01049421;GBDF01013996;XR_263132 MODEL 10072529 protein-coding Dock8-as1 DOCK8 antisense RNA 1 ASSOCIATED WITH hyper IgE syndrome (ortholog) NW_004955434 4806409 4820650 - 106148961 AGCD01032169;AGCD01032170;AGCD01032171;GBCQ01133036;XM_013516293 XP_013371747 MODEL 8932072 protein-coding Gpr31 G protein-coupled receptor 31 ENCODES a protein that exhibits arachidonate binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); response to acidic pH (ortholog); FOUND IN plasma membrane (ortholog) NW_004955439 14906304 14907574 + 102022965 AGCD01035993;XM_005390642 XP_005390699 MODEL 10275540 ncrna LOC106149893 uncharacterized LOC106149893 NW_004955456 13264037 13266528 - 106149893 AGCD01046582;GBCB01008407;XR_001236349;XR_001236350 MODEL 9001027 protein-coding Itgae integrin subunit alpha E PARTICIPATES IN E-cadherin signaling pathway; integrin mediated signaling pathway; FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955467 13052920 13112896 + 102018705 AGCD01051664;AGCD01051665;AGCD01051666;GBBH01214816;XM_005399709;XM_013522229;XM_013522230 XP_005399766;XP_013377683;XP_013377684 MODEL 8842640 protein-coding Chrna7 cholinergic receptor nicotinic alpha 7 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); activation of protein kinase C activity (ortholog); associative learning (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); Auditory Perceptual Disorders (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); apical plasma membrane (ortholog); asymmetric synapse (ortholog) NW_004955416 30687518 30798700 + 102021007 AGCD01017700;AGCD01017701;AGCD01017702;GBCE01011635;XM_013512688 XP_013368142 MODEL 8874230 ncrna LOC102015615 uncharacterized LOC102015615 NW_004955463 3590647 3599119 - 102015615 AGCD01049591;XR_263144 MODEL 8912026 pseudo LOC102016370 V-type proton ATPase subunit G 1 pseudogene NW_004955469 8848432 8848785 + 102016370 AGCD01052482 MODEL 8933502 protein-coding Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ENCODES a protein that exhibits 3',5'-nucleotide bisphosphate phosphatase activity (ortholog); 3'-nucleotidase activity (ortholog); INVOLVED IN chondrocyte development (ortholog); chondroitin sulfate proteoglycan metabolic process (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH chondrodysplasia with joint dislocations gPAPP type (ortholog); osteochondrodysplasia (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network membrane (ortholog) NW_004955454 15899820 15918222 - 102007970 AGCD01045497;AGCD01045498;GBDF01119202;GBDK01128450;XM_013520210;XM_013520211 XP_013375664;XP_013375665 MODEL 9013545 protein-coding LOC102020486 protein FAM156A/FAM156B-like NW_004955543 3463624 3470902 + 102020486 AGCD01071691;GBDK01280853;XM_005411364 XP_005411421 MODEL 9021784 protein-coding Anapc10 anaphase promoting complex subunit 10 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Mayer-Rokitansky-Kuster-Hauser syndrome type 1 (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytoplasm (ortholog) NW_004955428 945238 1029818 - 102030448 AGCD01027594;AGCD01027595;AGCD01027596;AGCD01027597;AGCD01027598;GBDJ01028582;XM_005386637;XM_005386638;XM_005386639;XM_013515276 XP_005386694;XP_005386695;XP_005386696;XP_013370730 MODEL 8715665 protein-coding Dcp2 decapping mRNA 2 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); mRNA catabolic process (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); P-body (ortholog); RISC complex (ortholog) NW_004955408 32868184 32923788 + 102018473 AGCD01008857;AGCD01008858;GBDF01250860;XM_005376510;XM_013506864 XP_005376567;XP_013362318 MODEL 9060773 protein-coding Hpd 4-hydroxyphenylpyruvate dioxygenase ENCODES a protein that exhibits 4-hydroxyphenylpyruvate dioxygenase activity (ortholog); iron ion binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN L-tyrosine catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955482 6586975 6595034 + 102010484 AGCD01057403;GBDF01017484;XM_005403106 XP_005403163 MODEL 39133863 misc_rna 7SK 7SK RNA 8797806 protein-coding Coro1b coronin 1B ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament branching (ortholog); actin filament bundle assembly (ortholog); FOUND IN actin filament (ortholog); cell leading edge (ortholog); cell periphery (ortholog) NW_004955422 18035629 18041009 + 102017782 AGCD01022936;GBDJ01011066;XM_005384327;XM_005384328;XM_013513936 XP_005384384;XP_005384385;XP_013369390 MODEL 9018271 protein-coding Il12b interleukin 12B ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); ankylosing spondylitis (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955408 13302506 13316300 - 102021422 AGCD01008352;GBBH01220378;XM_005376251 XP_005376308 MODEL 8756732 protein-coding LOC102005453 olfactory receptor 8D1-like NW_004955412 25120340 25121215 - 102005453 AGCD01013135;XM_013511250 XP_013366704 MODEL 39132219 rrna 5S_rRNA 5S ribosomal RNA 39134419 misc_rna 7SK 7SK RNA 9041705 ncrna LOC102010245 uncharacterized LOC102010245 NW_004955468 7542624 7555442 + 102010245 AGCD01052002;GBDF01145028;XR_263402 MODEL 8806863 protein-coding LOC102019058 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7-like NW_004955415 31786275 31788023 + 102019058 AGCD01016697;XM_005381019;XM_013512238 XP_005381076;XP_013367692 MODEL 9041909 protein-coding Efcab6 EF-hand calcium binding domain 6 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); prostate cancer (ortholog); Teratozoospermia (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); nucleoplasm (ortholog); sperm flagellum (ortholog) NW_004955413 28569080 28783455 - 102018278 AGCD01014561;AGCD01014562;AGCD01014563;AGCD01014564;AGCD01014565;AGCD01014566;AGCD01014567;GBDF01009010;XM_005379444;XM_005379445 XP_005379501;XP_005379502 MODEL 8907784 protein-coding Fbxl16 F-box and leucine rich repeat protein 16 FOUND IN cytoplasm (ortholog) NW_004955442 16498903 16510640 + 102018993 AGCD01037901;GBDJ01164561;XM_005391616 XP_005391673 MODEL 8996108 protein-coding Elp5 elongator acetyltransferase complex subunit 5 INVOLVED IN positive regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) NW_004955467 9654532 9660035 - 102024204 AGCD01051520;GBDF01005053;XM_005399532;XM_005399533;XM_005399534;XM_013522088 XP_005399589;XP_005399590;XP_005399591;XP_013377542 MODEL 8726721 ncrna LOC102011840 uncharacterized LOC102011840 NW_004955407 35818286 35827944 - 102011840 AGCD01007751;GBCQ01178585;XR_001231235;XR_001231237;XR_001231238;XR_259614 MODEL 10295351 ncrna LOC106149894 uncharacterized LOC106149894 NW_004955456 16004172 16005972 + 106149894 AGCD01046681;GBDK01118045;XR_001236356 MODEL 8991410 pseudo LOC102003668 uncharacterized LOC102003668 NW_004955423 22908358 22973034 - 102003668 AGCD01023981;AGCD01023982;AGCD01023983;AGCD01023984;AGCD01023985;AGCD01023986 MODEL 8932773 pseudo LOC102013738 putative ataxin-7-like protein 3B NW_004955505 4732285 4732553 + 102013738 AGCD01065131 MODEL 8990513 protein-coding Ctu2 cytosolic thiouridylase subunit 2 ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); CAKUT (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955541 2610021 2618197 + 102026798 AGCD01071418;AGCD01071419;GBBH01185371;XM_013507940 XP_013363394 MODEL 8843355 pseudo LOC102020140 60S ribosomal protein L23a-like NW_004955425 16223031 16238637 - 102020140 AGCD01025599 MODEL 8907126 pseudo LOC102014512 transcription initiation factor IIA subunit 2 pseudogene NW_004955402 34819191 34819915 + 102014512 AGCD01000871 MODEL 9002759 protein-coding Abce1 ATP binding cassette subfamily E member 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); CTPase activity (ortholog); endoribonuclease inhibitor activity (ortholog); INVOLVED IN negative regulation of endoribonuclease activity (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH breast carcinoma (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955428 1029909 1058902 + 102029644 AGCD01027598;AGCD01027599;GBDF01121311;XM_005386633 XP_005386690 MODEL 9008672 protein-coding Desi2 desumoylating isopeptidase 2 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955406 7881815 7894690 + 102007966 AGCD01005779;GBBH01150375;GBCC01014190;XM_013520388 XP_013375842 MODEL 8968201 protein-coding LOC102011390 kynurenine/alpha-aminoadipate aminotransferase, mitochondrial-like NW_004955403 36263930 36284758 + 102011390 AGCD01002535;AGCD01002536;GBCQ01008057;GBCQ01008066;XM_013513334 XP_013368788 MODEL 8804149 pseudo LOC102008343 40S ribosomal protein S6 pseudogene NW_004955515 3520030 3520862 + 102008343 AGCD01067288 MODEL 8785823 protein-coding LOC102017529 uncharacterized LOC102017529 NW_004955404 1839048 1853901 - 102017529 AGCD01003231;GBCE01108327;XM_013516796 XP_013372250 MODEL 8703124 protein-coding Crtc3 CREB regulated transcription coactivator 3 INVOLVED IN energy homeostasis (ortholog); macrophage activation (ortholog); negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955416 14672291 14768879 + 102013291 AGCD01017282;AGCD01017283;GBBH01006313;GBDI01182296;XM_013512506 XP_013367960 MODEL 8857945 protein-coding Anapc13 anaphase promoting complex subunit 13 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955501 4096026 4103212 + 102021369 AGCD01064111;GBDF01088790;XM_005406787 XP_005406844 MODEL 8720060 protein-coding LOC102015215 olfactory receptor 7C2 NW_004955495 8328332 8329291 - 102015215 AGCD01062198;XM_005406105 XP_005406162 MODEL 8746899 pseudo LOC102008721 28S ribosomal protein S36, mitochondrial pseudogene NW_004955476 2667352 2667663 - 102008721 AGCD01055231 MODEL 8842401 ncrna LOC102009483 uncharacterized LOC102009483 NW_004955412 27560591 27578228 + 102009483 AGCD01013240;AGCD01013241;GBDK01345407;XR_260029 MODEL 39131983 rrna 5S_rRNA 5S ribosomal RNA 8709512 protein-coding LOC102020870 magnesium transporter MRS2 homolog, mitochondrial-like NW_004955694 5431 7611 + 102020870 AGCD01078077;GBBH01208983;GBDI01228450;XM_005415072 XP_005415129 MODEL 39134118 misc_rna 7SK 7SK RNA 8791883 protein-coding LOC102012651 olfactory receptor 5V1-like NW_004955418 30263575 30290368 + 102012651 AGCD01019508;AGCD01019509;AGCD01019510;AGCD01019511;XM_005382371 XP_005382428 MODEL 8817378 ncrna LOC102013385 uncharacterized LOC102013385 NW_004955456 7020296 7021629 + 102013385 AGCD01046384;GBDF01208136;XR_262885 MODEL 9002245 ncrna LOC102007578 uncharacterized LOC102007578 NW_004955430 1701824 1706200 - 102007578 AGCD01029131;AGCD01029132;GBDF01156088;XR_001234556 MODEL 8903192 pseudo LOC102024346 UPF0538 protein C2orf76 homolog pseudogene NW_004955489 2537117 2537685 + 102024346 AGCD01059871;XM_005404539 MODEL 8927838 protein-coding Ica1 islet cell autoantigen 1 ENCODES a protein that exhibits membrane curvature sensor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); Golgi membrane (ortholog) NW_004955432 15136606 15297415 - 102029102 AGCD01031059;AGCD01031060;AGCD01031061;GBBH01051699;XM_005388097;XM_005388098;XM_005388099;XM_005388100;XM_005388101 XP_005388154;XP_005388155;XP_005388156;XP_005388157;XP_005388158 MODEL 9039655 protein-coding LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ENCODES a protein that exhibits calcidiol 1-monooxygenase activity (ortholog); secalciferol 1-monooxygenase activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcitriol biosynthetic process from calciol (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955458 5472404 5477001 - 102011841 AGCD01047494;GBDF01140801;XM_005397416 XP_005397473 MODEL 8888174 ncrna LOC102013742 uncharacterized LOC102013742 NW_004955430 2212051 2215118 - 102013742 AGCD01029160;GBDF01195932;XR_261410 MODEL 8699556 protein-coding Ephx2 epoxide hydrolase 2 ENCODES a protein that exhibits epoxide hydrolase activity (ortholog); lipid phosphatase activity (ortholog); lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); dephosphorylation (ortholog); epoxide metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) NW_004955403 49999563 50038800 + 102005434 AGCD01002954;AGCD01002955;GBBH01062366;XM_005373744 XP_005373801 MODEL 8767810 protein-coding LOC102015989 olfactory receptor 4E2 ENCODES a protein that exhibits copper ion binding (ortholog); odorant binding (ortholog); olfactory receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955550 2352164 2353090 + 102015989 AGCD01072625;XM_013508556 XP_013364010 MODEL 8921404 pseudo LOC102016371 ribosome biogenesis protein NSA2 homolog pseudogene NW_004955470 6566274 6569082 + 102016371 AGCD01052773 MODEL 39133864 misc_rna 7SK 7SK RNA 8848182 protein-coding Il12rb1 interleukin 12 receptor subunit beta 1 ENCODES a protein that exhibits coreceptor activity (ortholog); cytokine binding (ortholog); interleukin-12 receptor activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); interleukin-12-mediated signaling pathway (ortholog); interleukin-23-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); brain ischemia (ortholog); FOUND IN external side of plasma membrane (ortholog); interleukin-12 receptor complex (ortholog); interleukin-23 receptor complex (ortholog) NW_004955524 3276932 3299617 + 102011474 AGCD01068876;AGCD01068877;AGCD01068878;AGCD01068879;GBBH01019037;GBDF01252409;XM_013507268 XP_013362722 MODEL 39132220 rrna 5S_rRNA 5S ribosomal RNA 8996562 protein-coding Gpr32 G protein-coupled receptor 32 ASSOCIATED WITH autism spectrum disorder (ortholog) NW_004955559 500852 501880 - 102016206 AGCD01073590;XM_005412970 XP_005413027 MODEL 9023949 protein-coding Hpdl 4-hydroxyphenylpyruvate dioxygenase like ENCODES a protein that exhibits 4-hydroxymandelate synthase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 83 (ortholog); neurodegenerative disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955464 12936996 12940050 - 102005016 AGCD01050240;AGCD01050241;GBBH01049855;XM_013521662 XP_013377116 MODEL 8826093 protein-coding Kcna10 potassium voltage-gated channel subfamily A member 10 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); vestibular disease (ortholog) NW_004955435 13983831 13985366 - 102019315 AGCD01033213;XM_005388925 XP_005388982 MODEL 9027873 pseudo LOC102021601 nuclear receptor coactivator 1-like NW_004955546 2922210 2926579 + 102021601 AGCD01072106 MODEL 8742147 protein-coding Dock9 dedicator of cytokinesis 9 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog) NW_004955404 11542304 11760975 + 102013373 AGCD01003437;AGCD01003438;AGCD01003439;AGCD01003440;AGCD01003441;AGCD01003442;AGCD01003443;AGCD01003444;GBCE01114768;XM_005374066;XM_005374068;XM_005374070;XM_013516091;XM_013516094;XM_013516098;XM_013516099;XM_013516100;XM_013516105;XM_013516109 XP_005374123;XP_005374125;XP_005374127;XP_013371545;XP_013371548;XP_013371552;XP_013371553;XP_013371554;XP_013371559;XP_013371563 MODEL 8973894 protein-coding LOC102009095 carboxylesterase 1D-like NW_004955433 13464493 13497375 - 102009095 AGCD01031692;GBCQ01008179;XM_005388331;XM_005388332 XP_005388388;XP_005388389 MODEL 9001818 protein-coding LOC102019060 intercellular adhesion molecule 5-like NW_004955478 7958977 7970345 - 102019060 AGCD01056003;GBDK01346127;XM_005402181;XM_005402182;XM_013503152;XM_013503154;XM_013503155;XM_013503156 XP_005402238;XP_005402239;XP_013358606;XP_013358608;XP_013358609;XP_013358610 MODEL 8792298 ncrna LOC102003669 uncharacterized LOC102003669 NW_004955497 6927114 6931241 + 102003669 AGCD01062651;GBDF01281346;XR_264207;XR_264208 MODEL 8875411 ncrna LOC102007976 uncharacterized LOC102007976 NW_004955465 144325 179094 + 102007976 AGCD01050304;GBDF01285865;XR_263226 MODEL 8799324 pseudo LOC102020488 chromobox protein homolog 5 pseudogene NW_004955545 2014829 2017147 + 102020488 AGCD01071878;AGCD01071879;AGCD01071880 MODEL 8734368 protein-coding LOC102015618 apolipoprotein L3-like NW_004955413 22612905 22623535 + 102015618 AGCD01014309;GBDI01367440;XM_005379148 XP_005379205 MODEL 8753410 pseudo LOC102009099 UDP-glucuronosyltransferase 1-1 pseudogene NW_004955433 9487229 9488826 + 102009099 AGCD01031613 MODEL 8715523 ncrna LOC102012988 uncharacterized LOC102012988 NW_004955429 20903019 20922730 - 102012988 AGCD01028992;GBDF01263063;XR_261369 MODEL 8860222 pseudo LOC102014111 ribosome biogenesis protein BRX1 homolog NW_004955454 15678137 15679272 - 102014111 AGCD01045496 MODEL 8826392 protein-coding Dcph1 damage control phosphatase 1 ENCODES a protein that exhibits enzyme binding (ortholog); fructose-1-phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN DNA damage response (ortholog) NW_004955439 10136393 10151178 - 102003178 AGCD01035857;AGCD01035858;GBCQ01032562;XM_005390582 XP_005390639 MODEL 8904491 pseudo LOC102005454 lupus La protein homolog pseudogene NW_004955412 30675648 30678489 + 102005454 AGCD01013305 MODEL 9021950 pseudo LOC102010247 S-phase kinase-associated protein 1 pseudogene NW_004955413 5920746 5923360 + 102010247 AGCD01013695 MODEL 8769827 ncrna LOC102017530 uncharacterized LOC102017530 NW_004955452 3571075 3600205 + 102017530 AGCD01043930;AGCD01043931;GBDI01141659;XR_001236010;XR_262646 MODEL 8716787 protein-coding LOC102013743 olfactory receptor 4C6-like NW_004955511 4928189 4955200 + 102013743 AGCD01066539;GBCE01171519;XM_005408279;XM_013506517;XM_013506518 XP_005408336;XP_013361971;XP_013361972 MODEL 8897289 pseudo LOC102015217 transcription factor BTF3 pseudogene NW_004955500 7977756 7982393 + 102015217 AGCD01063969 MODEL 9054309 protein-coding Elp6 elongator acetyltransferase complex subunit 6 INVOLVED IN apoptotic process (ortholog); autophagosome maturation (ortholog); autophagy (ortholog); FOUND IN cytosol (ortholog); elongator holoenzyme complex (ortholog); nucleus (ortholog) NW_004955420 24795416 24807790 + 102013177 AGCD01021332;AGCD01021333;GBDF01253292;XM_005383396;XM_005383397;XM_005383398;XM_005383399 XP_005383453;XP_005383454;XP_005383455;XP_005383456 MODEL 8916185 protein-coding Itgal integrin subunit alpha L ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cell adhesion receptor activity (ortholog); ICAM-3 receptor activity (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell adhesion mediated by integrin (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Behcet's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); external side of plasma membrane (ortholog) NW_004955493 7397813 7435420 + 102015535 AGCD01061187;AGCD01061188;AGCD01061189;AGCD01061190;AGCD01061191;AGCD01061192;AGCD01061193;GBBH01163916;GBDK01136382;XM_013504854 XP_013360308 MODEL 8830038 protein-coding Ctxn1 cortexin 1 NW_004955563 1343212 1344056 + 102018444 AGCD01074142;GBBH01001939;GBCB01089641;XM_005413139 XP_005413196 MODEL 8703253 pseudo LOC102020141 general transcription factor IIH subunit 1 pseudogene NW_004955501 6162583 6163797 + 102020141 AGCD01064181 MODEL 8981293 protein-coding Anapc15 anaphase promoting complex subunit 15 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog) NW_004955414 19218727 19222138 + 102027513 AGCD01015308;GBCB01023059;XM_005379996;XM_005379998;XM_005380000;XM_005380003;XM_005380004;XM_005380005;XM_013511824 XP_005380053;XP_005380055;XP_005380057;XP_005380060;XP_005380061;XP_005380062;XP_013367278 MODEL 8716957 protein-coding Hpgd 15-hydroxyprostaglandin dehydrogenase ENCODES a protein that exhibits 15-hydroxyprostaglandin dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); NAD binding (ortholog); INVOLVED IN ductus arteriosus closure (ortholog); female pregnancy (ortholog); kidney development (ortholog); ASSOCIATED WITH carcinoma (ortholog); colon carcinoma (ortholog); Fever (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955403 32569841 32614860 + 102021932 AGCD01002436;AGCD01002437;AGCD01002438;GBCQ01010378;XM_005373533 XP_005373590 MODEL 8826422 protein-coding Efcab7 EF-hand calcium binding domain 7 INVOLVED IN positive regulation of protein import into nucleus (ortholog); positive regulation of protein localization to ciliary membrane (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Postaxial Polydactyly (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955423 26473310 26510704 - 102004495 AGCD01024097;GBCB01077144;XM_005385327;XM_005385328;XM_005385329;XM_005385330 XP_005385384;XP_005385385;XP_005385386;XP_005385387 MODEL 8994969 ncrna LOC102011013 uncharacterized LOC102011013 NW_004955487 9073542 9074205 + 102011013 AGCD01059449;AGCD01059450;GBDF01127916;XR_263991 MODEL 39134424 misc_rna 7SK 7SK RNA 8827585 pseudo LOC102024347 serine/arginine-rich splicing factor 10 pseudogene NW_004955490 1469012 1472222 + 102024347 AGCD01060108;AGCD01060109 MODEL 8950473 protein-coding Coro1c coronin 1C ENCODES a protein that exhibits actin filament binding (ortholog); small GTPase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); corpus callosum development (ortholog); endosomal transport (ortholog); ASSOCIATED WITH IgA glomerulonephritis (ortholog); lung non-small cell carcinoma (ortholog); proliferative diabetic retinopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); endosome membrane (ortholog) NW_004955455 9905243 9952504 - 102027145 AGCD01045932;AGCD01045933;GBBH01005477;XM_013520465 XP_013375919 MODEL 8756232 protein-coding LOC102012655 PRAME family member 9/15-like NW_004955486 31204 93920 - 102012655 AGCD01058788;AGCD01058789;AGCD01058790;AGCD01058791;AGCD01058792;AGCD01058793;AGCD01058794;AGCD01058795;AGCD01058796;AGCD01058797;AGCD01058798;AGCD01058799;AGCD01058800;GBBH01072713;XM_013504133 XP_013359587 MODEL 9043073 pseudo LOC102008345 phosducin-like protein 3 pseudogene NW_004955434 11550951 11551673 + 102008345 AGCD01032380 MODEL 8917790 protein-coding Bptf bromodomain PHD finger transcription factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN histone modification pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cell body (ortholog); chromatin (ortholog); cytosol (ortholog) NW_004955478 6990816 7088751 + 102026861 AGCD01055938;AGCD01055939;AGCD01055940;AGCD01055941;GBBH01089810;GBCQ01152099;XM_013503185;XM_013503186;XM_013503187;XM_013503188;XM_013503189;XM_013503190;XM_013503191;XM_013503192;XM_013503193;XM_013503194;XM_013503195 XP_013358639;XP_013358640;XP_013358641;XP_013358642;XP_013358643;XP_013358644;XP_013358645;XP_013358646;XP_013358647;XP_013358648;XP_013358649 MODEL 9030663 protein-coding Cwh43 cell wall biogenesis 43 C-terminal homolog INVOLVED IN brain development (ortholog); cell adhesion (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); normal pressure hydrocephalus (ortholog) NW_004955447 18683173 18733546 - 102020393 AGCD01041183;AGCD01041184;GBDJ01334628;XM_005392926 XP_005392983 MODEL 8705060 pseudo LOC102008726 peptidyl-prolyl cis-trans isomerase FKBP11 pseudogene NW_004955481 3772130 3773131 + 102008726 AGCD01056916 MODEL 10287355 protein-coding LOC106149895 uncharacterized LOC106149895 NW_004955456 15265845 15274439 - 106149895 AGCD01046666;GBDK01143761;XM_013520636 XP_013376090 MODEL 8836538 protein-coding Fbxl17 F-box and leucine rich repeat protein 17 INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein polyubiquitination (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955418 6314503 6758531 + 102025687 AGCD01018875;AGCD01018876;AGCD01018877;AGCD01018878;AGCD01018879;AGCD01018880;AGCD01018881;AGCD01018882;GBCE01085097;GBDJ01275606;XM_005382343 XP_005382400 MODEL 8723502 ncrna LOC102014517 uncharacterized LOC102014517 NW_004955611 131423 144766 + 102014517 AGCD01077146;AGCD01077147;GBDF01277864;XR_001232576;XR_265162;XR_265163;XR_265164 MODEL 8947664 protein-coding Chrna9 cholinergic receptor nicotinic alpha 9 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH lung small cell carcinoma (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); plasma membrane (ortholog) NW_004955443 7148604 7157824 - 102018865 AGCD01038273;GBBH01074482;XM_013518117 XP_013373571 MODEL 39131984 rrna 5S_rRNA 5S ribosomal RNA 9013599 ncrna LOC102020871 uncharacterized LOC102020871 NW_004955451 11803076 11804333 + 102020871 AGCD01043366;GBDF01195668;XR_001235943;XR_001235944 MODEL 8839559 protein-coding Abcf1 ATP binding cassette subfamily F member 1 ENCODES a protein that exhibits ATP binding (ortholog); ribosome binding (ortholog); translation activator activity (ortholog); INVOLVED IN positive regulation of translation (ortholog); ribosome biogenesis (ortholog); translational initiation (ortholog); ASSOCIATED WITH allergic disease (ortholog); Disease Progression (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear envelope (ortholog) NW_004955583 600381 607211 + 102004131 AGCD01075841;AGCD01075842;GBCE01052609;GBDK01129598;XM_013509796;XM_013509797 XP_013365250;XP_013365251 MODEL 9003061 protein-coding LOC102015992 mesothelin NW_004955442 16439935 16447814 - 102015992 AGCD01037900;GBDK01016442;XM_005391605;XM_013517948;XM_013517949;XM_013517950;XM_013517951;XM_013517952 XP_005391662;XP_013373402;XP_013373403;XP_013373404;XP_013373405;XP_013373406 MODEL 8870400 pseudo LOC102011391 dnaJ homolog subfamily B member 6-like NW_004955451 11366508 11386075 + 102011391 AGCD01043350;AGCD01043351;AGCD01043352 MODEL 9065681 protein-coding LOC102013387 olfactory receptor 10A2-like NW_004955458 2450590 2451552 - 102013387 AGCD01047233;XM_005397241 XP_005397298 MODEL 8717985 protein-coding Dohh deoxyhypusine hydroxylase ENCODES a protein that exhibits deoxyhypusine monooxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN peptidyl-hypusine biosynthetic process (ortholog); ASSOCIATED WITH Neurodevelopmental Disorder with Microcephaly, Cerebral Atrophy, and Visual Impairment (ortholog); Pulmonary Arterial Hypertension (ortholog); pulmonary hypertension (ortholog) NW_004955495 5073794 5080298 + 102020024 AGCD01061973;GBDF01193806;XM_005405836;XM_013505247;XM_013505248 XP_005405893;XP_013360701;XP_013360702 MODEL 8957872 protein-coding LOC102007579 olfactory receptor 5B3-like NW_004955511 3369163 3370107 - 102007579 AGCD01066459;XM_005408264 XP_005408321 MODEL 8747515 protein-coding Det1 DET1 partner of COP1 E3 ubiquitin ligase ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); protein-containing complex assembly (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955416 16393199 16408144 + 102008098 AGCD01017354;AGCD01017355;GBCB01056645;XM_005381574;XM_005381575;XM_013512684;XM_013512685 XP_005381631;XP_005381632;XP_013368138;XP_013368139 MODEL 8930688 ncrna LOC102016374 uncharacterized LOC102016374 NW_004955473 5770425 5807446 + 102016374 AGCD01053983;AGCD01053984;XR_263582 MODEL 39132221 rrna 5S_rRNA 5S ribosomal RNA 8996537 protein-coding Crx cone-rod homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian rhythm (ortholog); positive regulation of photoreceptor cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); cone-rod dystrophy 2 (ortholog); congenital myopathy 1A (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955574 1544917 1548912 + 102015358 AGCD01075189;XM_005413886 XP_005413943 MODEL 8877137 pseudo LOC102009484 signal peptide peptidase-like 3 pseudogene NW_004955412 33749516 33760698 + 102009484 AGCD01013370 MODEL 8748300 protein-coding Il12rb2 interleukin 12 receptor subunit beta 2 ENCODES a protein that exhibits coreceptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN interleukin-12-mediated signaling pathway (ortholog); peptidyl-tyrosine phosphorylation (ortholog); positive regulation of natural killer cell proliferation (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); primary biliary cholangitis 3 (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955423 23774557 23806744 - 102015967 AGCD01024017;AGCD01024018;GBBH01120818;GBDF01250178;XM_013514509 XP_013369963 MODEL 8783802 ncrna LOC102021603 uncharacterized LOC102021603 NW_004955442 5816330 5828896 + 102021603 AGCD01037570;XR_262117 MODEL 8877078 pseudo LOC102008351 39S ribosomal protein L47, mitochondrial pseudogene NW_004955438 21220270 21221541 - 102008351 AGCD01035530 MODEL 8799876 protein-coding Gpr33 G protein-coupled receptor 33 ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog) NW_004955409 29124200 29130823 + 102010876 AGCD01010253;GBBH01175297;XM_005376955 XP_005377012 MODEL 8858668 protein-coding LOC102011844 cytochrome c oxidase assembly factor 1 homolog INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); FOUND IN mitochondrial complex I intermediate assembly complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955460 182778 285053 + 102011844 AGCD01048337;AGCD01048338;AGCD01048339;GBDF01047278;XM_005397712 XP_005397769 MODEL 8800749 protein-coding Braf B-Raf proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); MAP kinase kinase activity (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; colorectal cancer pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); ameloblastoma (ortholog); Aortic Aneurysm, Giant Congenital (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955494 2567238 2712708 + 102018105 AGCD01061441;AGCD01061442;AGCD01061443;AGCD01061444;AGCD01061445;AGCD01061446;AGCD01061447;AGCD01061448;GBDF01011297;GBDF01011303;XM_005405413;XM_005405415;XM_005405418;XM_005405419;XM_013504993;XM_013504994;XM_013504995;XM_013504996;XM_013504997;XR_001231320;XR_001231321 XP_005405470;XP_005405472;XP_005405475;XP_005405476;XP_013360447;XP_013360448;XP_013360449;XP_013360450;XP_013360451 MODEL 9067303 ncrna LOC102003670 uncharacterized LOC102003670 NW_004955424 25890232 25893041 - 102003670 AGCD01025056;GBDF01023092;XR_261109 MODEL 8794002 protein-coding Elspbp1 epididymal sperm binding protein 1 NW_004955609 227424 241987 - 102011266 AGCD01077054;XM_005414929;XM_013510121 XP_005414986;XP_013365575 MODEL 8710415 protein-coding Ica1l islet cell autoantigen 1 like INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955457 11983201 12085870 + 102005670 AGCD01046997;AGCD01046998;AGCD01046999;GBDF01125399;XM_005397050;XM_005397051;XM_005397052;XM_005397053;XM_005397054 XP_005397107;XP_005397108;XP_005397109;XP_005397110;XP_005397111 MODEL 8960601 pseudo LOC102011014 60S ribosomal protein L32 pseudogene NW_004955422 28865640 28866566 + 102011014 AGCD01023372 MODEL 8956397 protein-coding Itgam integrin subunit alpha M ENCODES a protein that exhibits cargo receptor activity (ortholog); cell adhesion receptor activity (ortholog); complement component C3b binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); amyloid-beta clearance (ortholog); cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955493 8116886 8160806 + 102005053 AGCD01061266;AGCD01061267;AGCD01061268;AGCD01061269;AGCD01061270;AGCD01061271;AGCD01061272;GBCE01084594;XM_005405314;XM_005405316;XM_013504857;XM_013504858 XP_005405371;XP_005405373;XP_013360311;XP_013360312 MODEL 8885314 protein-coding Anapc16 anaphase promoting complex subunit 16 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955437 19367662 19381607 - 102030475 AGCD01034846;AGCD01034847;GBCQ01001144;XM_005390017;XM_005390018 XP_005390074;XP_005390075 MODEL 8970189 protein-coding Ephx3 epoxide hydrolase 3 ENCODES a protein that exhibits epoxide hydrolase activity (ortholog); INVOLVED IN epoxide metabolic process (ortholog); ASSOCIATED WITH melanoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN membrane (ortholog) NW_004955495 7995979 8001423 + 102009853 AGCD01062174;GBDK01360091;XM_005406086;XM_013505126;XM_013505127 XP_005406143;XP_013360580;XP_013360581 MODEL 9042599 ncrna LOC102015620 uncharacterized LOC102015620 NW_004955468 9394422 9397630 - 102015620 AGCD01052047;GBCB01074100;XR_001236870;XR_001236871;XR_263409;XR_263411 MODEL 8926236 protein-coding Chrnb1 cholinergic receptor nicotinic beta 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); monoatomic cation transport (ortholog); muscle cell development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 2A (ortholog); congenital myasthenic syndrome 2C (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) NW_004955467 9471962 9482370 - 102013271 AGCD01051513;GBCB01005969;XM_005399490;XM_005399491;XM_005399492;XM_005399493;XM_005399494;XM_013522232;XM_013522233 XP_005399547;XP_005399548;XP_005399549;XP_005399550;XP_005399551;XP_013377686;XP_013377687 MODEL 8756845 ncrna LOC102012991 uncharacterized LOC102012991 NW_004955431 707760 745153 - 102012991 AGCD01029876;AGCD01029877;AGCD01029878;GBDF01223749;XR_261438;XR_261439 MODEL 8996389 ncrna LOC102009100 uncharacterized LOC102009100 NW_004955523 130276 134656 - 102009100 AGCD01068435;XR_001231912 MODEL 8865495 ncrna LOC102014112 uncharacterized LOC102014112 NW_004955455 1017376 1026939 - 102014112 AGCD01045567;GBDF01192295;XR_262807 MODEL 8983901 protein-coding LOC102010250 mitochondrial ornithine transporter 2 NW_004955415 12462640 12463852 + 102010250 AGCD01016197;GBDF01083463;XM_005380737 XP_005380794 MODEL 8973291 ncrna LOC102017532 uncharacterized LOC102017532 NW_004955405 28134343 28156820 + 102017532 AGCD01005231;AGCD01005232;GBDF01124119;XR_259401 MODEL 8974850 protein-coding Coro2a coronin 2A ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN brush border (ortholog); transcription repressor complex (ortholog) NW_004955419 27323164 27386488 + 102018498 AGCD01020430;AGCD01020431;AGCD01020432;GBDJ01015509;XM_005382829;XM_005382831;XM_005382833 XP_005382886;XP_005382888;XP_005382890 MODEL 8714239 protein-coding Kcna2 potassium voltage-gated channel subfamily A member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); kinesin binding (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); corpus callosum development (ortholog); neuronal action potential (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) NW_004955435 14074346 14080026 - 102019634 AGCD01033215;AGCD01033216;GBDI01208819;XM_005388926;XM_005388927;XM_005388929;XM_005388930;XM_013516559 XP_005388983;XP_005388984;XP_005388986;XP_005388987;XP_013372013 MODEL 8955269 pseudo LOC102015219 dnaJ homolog subfamily A member 1 pseudogene NW_004955502 7160071 7161415 + 102015219 AGCD01064431 MODEL 10377279 protein-coding LOC106149896 polycystic kidney disease protein 1-like 1 NW_004955456 5478010 5496105 + 106149896 AGCD01046330;AGCD01046331;AGCD01046332;GBDI01253281;XM_013520638 XP_013376092 MODEL 8865192 ncrna LOC102020144 uncharacterized LOC102020144 NW_004955428 4408830 4453931 - 102020144 AGCD01027690;AGCD01027691;AGCD01027692;AGCD01027693;GBDF01084251;XR_001234436 MODEL 8906443 protein-coding Ctxn2 cortexin 2 NW_004955409 5685318 5695682 - 102013255 AGCD01009321;GBDF01260793;XM_005376706;XM_005376707 XP_005376763;XP_005376764 MODEL 8741740 protein-coding LOC102019064 40S ribosomal protein S4, X isoform-like NW_004955484 2005024 2008857 + 102019064 AGCD01058077;GBDF01007579;XM_005403440 XP_005403497 MODEL 8928042 protein-coding LOC102014519 disintegrin and metalloproteinase domain-containing protein 20-like NW_004955656 80199 81469 + 102014519 AGCD01077847;GBDF01010727;GBDF01010728;XM_005415061 XP_005415118 MODEL 8930698 ncrna LOC102020872 uncharacterized LOC102020872 NW_004955873 4268 9703 + 102020872 AGCD01078535;XR_265192 MODEL 8753664 protein-coding LOC102020489 beta-microseminoprotein-like NW_004955546 2799719 2807328 + 102020489 AGCD01072101;GBDI01016094;XM_005411810;XM_005411811 XP_005411867;XP_005411868 MODEL 39134425 misc_rna 7SK 7SK RNA 39133865 misc_rna 7SK 7SK RNA 8866043 ncrna LOC102024349 uncharacterized LOC102024349 NW_004955493 2933481 2936489 + 102024349 AGCD01060974;GBDF01276985;XR_264077 MODEL 8717866 ncrna LOC102012658 uncharacterized LOC102012658 NW_004955421 25068843 25105800 + 102012658 AGCD01022227;AGCD01022228;GBCQ01032486;XR_260828 MODEL 8954275 ncrna LOC102005457 uncharacterized LOC102005457 NW_004955413 21113074 21147758 + 102005457 AGCD01014246;AGCD01014247;GBBH01122379;XR_001232964;XR_001232965;XR_001232966 MODEL 8827848 protein-coding LOC102003671 zinc finger protein 431-like NW_004955499 450865 478358 - 102003671 AGCD01063232;GBDI01258841;XM_005406501;XM_013505568;XM_013505569 XP_005406558;XP_013361022;XP_013361023 MODEL 8869995 protein-coding Deup1 deuterosome assembly protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH glioblastoma (ortholog); lung non-small cell carcinoma (ortholog); polycystic kidney disease (ortholog); FOUND IN deuterosome (ortholog) NW_004955414 1062968 1126698 - 102025452 AGCD01014757;GBBH01011302;GBCE01162883;XM_005379707;XM_013512047;XM_013512048;XM_013512049;XM_013512050;XM_013512051;XM_013512052 XP_005379764;XP_013367501;XP_013367502;XP_013367503;XP_013367504;XP_013367505;XP_013367506 MODEL 8839753 ncrna LOC102008729 uncharacterized LOC102008729 NW_004955419 12989057 12990429 + 102008729 AGCD01019990;GBDF01083945;XR_001233562 MODEL 8709730 protein-coding Icam1 intercellular adhesion molecule 1 ENCODES a protein that exhibits integrin binding (ortholog); protein-containing complex binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN eicosanoid signaling pathway; pro-inflammatory cytokine mediated pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) NW_004955495 1561464 1573282 + 102029873 AGCD01061701;AGCD01061702;AGCD01061703;GBDK01022433;XM_005405586;XM_005405587 XP_005405643;XP_005405644 MODEL 8806657 protein-coding Itgav integrin subunit alpha V ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); collagen binding (ortholog); coreceptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); apolipoprotein A-I-mediated signaling pathway (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN integrin mediated signaling pathway; platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); Alveolar Bone Loss (ortholog); FOUND IN alphav-beta3 integrin-HMGB1 complex (ortholog); alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog); cell surface (ortholog) NW_004955403 11588536 11669809 - 102013676 AGCD01001957;GBCE01053605;XM_005373337;XM_013512419;XM_013512423;XM_013512426 XP_005373394;XP_013367873;XP_013367877;XP_013367880 MODEL 8881227 pseudo LOC102009487 heterogeneous nuclear ribonucleoprotein A1-like NW_004955467 9990149 9991458 + 102009487 AGCD01051538 MODEL 9030338 protein-coding Anapc2 anaphase promoting complex subunit 2 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); negative regulation of gene expression (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); Fetal Growth Retardation (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleoplasm (ortholog) NW_004955513 5183472 5194253 - 102004743 AGCD01066961;GBDF01082252;XM_005408582 XP_005408639 MODEL 39131985 rrna 5S_rRNA 5S ribosomal RNA 9002255 protein-coding LOC102007981 translation initiation factor IF-2-like NW_004955413 24038776 24042868 - 102007981 AGCD01014345;GBDI01226162;XM_005379216 XP_005379273 MODEL 9010206 protein-coding Efcab8 EF-hand calcium binding domain 8 NW_004955422 28269996 28337345 - 102005054 AGCD01023345;GBDF01299149;XM_013514341;XM_013514342;XM_013514343;XM_013514344 XP_013369795;XP_013369796;XP_013369797;XP_013369798 MODEL 8979000 protein-coding Fbxl18 F-box and leucine rich repeat protein 18 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955460 10318089 10349135 - 102029715 AGCD01048578;AGCD01048579;GBDI01254817;XM_005397840;XM_005397841;XM_013521127;XM_013521128;XR_263050 XP_005397897;XP_005397898;XP_013376581;XP_013376582 MODEL 8924925 pseudo LOC102008732 cytochrome b-c1 complex subunit 7-like NW_004955484 9493540 9493755 - 102008732 AGCD01058418 MODEL 8724722 ncrna LOC102011392 uncharacterized LOC102011392 NW_004955404 682584 698750 + 102011392 AGCD01003207;XR_259283 MODEL 8957897 protein-coding Hpn hepsin ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN basement membrane disassembly (ortholog); cholesterol homeostasis (ortholog); cochlea morphogenesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); lipid storage disease (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955468 4384630 4399881 + 102010244 AGCD01051908;GBDI01070849;XM_005400020 XP_005400077 MODEL 8919558 protein-coding Abcf2 ATP binding cassette subfamily F member 2 ASSOCIATED WITH Disease Progression (ortholog); FOUND IN cytosol (ortholog) NW_004955491 5630543 5642246 - 102007562 AGCD01060493;GBDF01000389;XM_005404829;XM_013504622;XM_013504623;XM_013504624 XP_005404886;XP_013360076;XP_013360077;XP_013360078 MODEL 8719320 ncrna LOC102013746 uncharacterized LOC102013746 NW_004955513 5355935 5367253 + 102013746 AGCD01066968;GBCB01130230;XR_001231758;XR_264483;XR_264484 MODEL 8718124 protein-coding Cx3cl1 C-X3-C motif chemokine ligand 1 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CX3C chemokine receptor binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); autocrine signaling (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); allergic disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) NW_004955433 15023272 15034650 + 102025717 AGCD01031744;AGCD01031745;GBBH01091020;XM_005388386;XM_005388387 XP_005388443;XP_005388444 MODEL 8981400 protein-coding Brap BRCA1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); nuclear localization sequence binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN MAPK cascade (ortholog); negative regulation of signal transduction (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH myocardial infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); ubiquitin ligase complex (ortholog) NW_004955482 8254709 8282416 - 102029515 AGCD01057515;GBDF01246857;XM_005403172 XP_005403229 MODEL 39132223 rrna 5S_rRNA 5S ribosomal RNA 9031260 pseudo LOC102016375 39S ribosomal protein L20, mitochondrial-like NW_004955415 7808215 7808842 + 102016375 AGCD01016058 MODEL 8895145 protein-coding Il13 interleukin 13 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-13 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); alcoholic hepatitis (ortholog); allergic conjunctivitis (ortholog); FOUND IN cytoplasm (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955408 4046406 4049795 + 102030278 AGCD01008086;GBBH01173848;XM_005376104;XM_013508342 XP_005376161;XP_013363796 MODEL 8822606 pseudo LOC102014117 calcium uptake protein 3, mitochondrial pseudogene NW_004955458 1985879 1991150 + 102014117 AGCD01047209 MODEL 9055329 ncrna LOC102021610 uncharacterized LOC102021610 NW_004955447 10979457 11045604 - 102021610 AGCD01040895;AGCD01040896;AGCD01040897;AGCD01040898;AGCD01040899;GBCB01088708;XR_262419 MODEL 9062900 pseudo LOC102008354 pre-mRNA-processing factor 17-like NW_004955441 193642 199372 - 102008354 AGCD01036688 MODEL 8855260 pseudo LOC102007580 protein kinase C iota type pseudogene NW_004955430 14241459 14243053 - 102007580 AGCD01029564 MODEL 8750630 pseudo LOC102015996 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like pseudogene NW_004955446 17831268 17845230 - 102015996 AGCD01040386;XM_005392759 MODEL 8848508 protein-coding Coro2b coronin 2B ENCODES a protein that exhibits talin binding (ortholog); vinculin binding (ortholog); INVOLVED IN focal adhesion assembly (ortholog); negative regulation of cell-substrate adhesion (ortholog); negative regulation of establishment of protein localization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN focal adhesion (ortholog) NW_004955450 7522447 7573043 - 102020179 AGCD01042540;AGCD01042541;GBDJ01228574;XM_005393673;XM_005393674 XP_005393730;XP_005393731 MODEL 8952206 protein-coding LOC102014118 serine protease 40-like NW_004955459 210829 216046 - 102014118 AGCD01047928;GBDF01008590;XM_005397546 XP_005397603 MODEL 8899079 protein-coding LOC102009491 olfactory receptor 52N1-like NW_004955414 21756367 21757263 - 102009491 AGCD01015432;XM_013511765 XP_013367219 MODEL 8813001 protein-coding LOC102020146 ligand-dependent corepressor NW_004955507 3039562 3195267 + 102020146 AGCD01065610;AGCD01065611;AGCD01065612;AGCD01065613;GBDF01088445;XM_005407585;XM_005407589;XM_005407590;XM_005407591;XM_005407592;XM_005407593;XM_013506199;XM_013506200;XM_013506201 XP_005407642;XP_005407646;XP_005407647;XP_005407648;XP_005407649;XP_005407650;XP_013361653;XP_013361654;XP_013361655 MODEL 39133866 misc_rna 7SK 7SK RNA 39134426 misc_rna 7SK 7SK RNA 39134119 misc_rna 7SK 7SK RNA 8891162 protein-coding Dok1 docking protein 1 INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); intracellular signal transduction (ortholog); macrophage colony-stimulating factor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); Ovarian Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955424 11233601 11236397 - 102024254 AGCD01024559;GBCE01096800;XM_005385493;XM_013514651 XP_005385550;XP_013370105 MODEL 8731910 protein-coding Ephx4 epoxide hydrolase 4 NW_004955423 2389745 2425036 - 102026760 AGCD01023472;GBDJ01093449;XM_005385060 XP_005385117 MODEL 9034545 protein-coding LOC102011016 guanylate-binding protein 4 NW_004955423 4931941 4946708 + 102011016 AGCD01023550;GBBH01026001;GBCQ01139851;XM_013514413 XP_013369867 MODEL 8878597 pseudo LOC102009101 DNA-directed RNA polymerases I, II, and III subunit RPABC1 pseudogene NW_004955434 8689984 8692539 - 102009101 AGCD01032262 MODEL 8828160 pseudo LOC102012993 RING1 and YY1-binding protein pseudogene NW_004955432 3966376 3967076 + 102012993 AGCD01030683 MODEL 9028704 protein-coding LOC102005458 zinc finger protein 793 NW_004955468 1948677 2003834 + 102005458 AGCD01051789;AGCD01051790;AGCD01051791;AGCD01051792;AGCD01051793;GBDF01306191;XM_005399907;XM_005399908;XM_005399911;XM_013522326;XM_013522327;XM_013522328 XP_005399964;XP_005399965;XP_005399968;XP_013377780;XP_013377781;XP_013377782 MODEL 9043097 pseudo LOC102010252 60S ribosomal protein L35a pseudogene NW_004955475 5564528 5564859 + 102010252 AGCD01054922 MODEL 9043427 protein-coding Cry1 cryptochrome circadian regulator 1 ENCODES a protein that exhibits deoxyribodipyrimidine photo-lyase activity (ortholog); DNA (6-4) photolyase activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); alcohol withdrawal syndrome (ortholog); antidepressant type abuse (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955405 40878227 40941664 - 102026388 AGCD01005537;AGCD01005538;GBCB01042575;GBDJ01274072;XM_005374636 XP_005374693 MODEL 8813589 protein-coding Chrnb2 cholinergic receptor nicotinic beta 2 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); associative learning (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dopaminergic synapse (ortholog) NW_004955545 1065457 1077056 + 102014086 AGCD01071836;GBDF01025054;XM_005411526 XP_005411583 MODEL 9016724 pseudo LOC102015221 protein ARMCX6-like NW_004955503 7648675 7650244 + 102015221 AGCD01064797 MODEL 8992088 protein-coding Gpr34 G protein-coupled receptor 34 ASSOCIATED WITH ovarian cyst (ortholog) NW_004955565 1096853 1103610 - 102026682 AGCD01074303;GBBH01036945;XM_005413246;XM_005413247 XP_005413303;XP_005413304 MODEL 8999557 pseudo LOC102013388 calcium-transporting ATPase type 2C member 1 pseudogene NW_004955408 2427135 2428006 + 102013388 AGCD01008006 MODEL 10126340 ncrna LOC106149897 uncharacterized LOC106149897 NW_004955456 9449081 9464760 - 106149897 AGCD01046510;GBDF01306056;XR_001236363;XR_001236364 MODEL 8793234 ncrna LOC102014520 uncharacterized LOC102014520 NW_004955403 30369736 30457874 - 102014520 AGCD01002395;AGCD01002396;AGCD01002397;AGCD01002398;XR_259213 MODEL 8841209 protein-coding Ctxn3 cortexin 3 NW_004955415 731895 741765 + 102030412 AGCD01015853;XM_005380546 XP_005380603 MODEL 8989063 protein-coding Dcps decapping enzyme, scavenger ENCODES a protein that exhibits 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity (ortholog); identical protein binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); mRNA methylguanosine-cap decapping (ortholog); ASSOCIATED WITH Al-Raqad Syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); m7G(5')pppN diphosphatase complex (ortholog) NW_004955412 27326946 27367455 + 102006559 AGCD01013234;AGCD01013235;AGCD01013236;GBDF01121111;XM_005378510 XP_005378567 MODEL 8944773 protein-coding Kcna3 potassium voltage-gated channel subfamily A member 3 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN corpus callosum development (ortholog); optic nerve development (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN axon (ortholog); calyx of Held (ortholog); glutamatergic synapse (ortholog) NW_004955435 14132877 14148911 - 102020836 AGCD01033218;GBDI01085535;GBDI01383956;XM_013516557 XP_013372011 MODEL 8960705 protein-coding Icam2 intercellular adhesion molecule 2 ENCODES a protein that exhibits integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); dendritic cell migration (ortholog); leukocyte cell-cell adhesion (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); malignant mesothelioma (ortholog); Stomach Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cleavage furrow (ortholog); microvillus (ortholog) NW_004955478 7846460 7851889 + 102017233 AGCD01055998;GBDJ01213998;XM_005402176 XP_005402233 MODEL 8857148 ncrna LOC102020490 uncharacterized LOC102020490 NW_004955441 9358282 9362331 - 102020490 AGCD01037019;GBDF01209913;XR_262063 MODEL 8760565 ncrna LOC102012659 uncharacterized LOC102012659 NW_004955422 126981 128331 + 102012659 AGCD01022394;GBDF01161749;XR_260841 MODEL 8957352 ncrna LOC102015621 uncharacterized LOC102015621 NW_004955413 32654378 32678418 + 102015621 AGCD01014642;GBDF01124715;XR_001232938;XR_001232939 MODEL 9039305 pseudo LOC102024355 solute carrier family 2, facilitated glucose transporter member 3 pseudogene NW_004955423 8600576 8602607 + 102024355 AGCD01023634;XM_005385137 MODEL 8802878 protein-coding LOC102008750 rho GTPase-activating protein 21-like NW_004955503 2090544 2097475 + 102008750 AGCD01064595;AGCD01064596;XM_013505847 XP_013361301 MODEL 8962480 pseudo LOC102003672 60S ribosomal protein L17 pseudogene NW_004955424 27996316 28003860 - 102003672 AGCD01025143;AGCD01025144;XM_005385817 MODEL 39134120 misc_rna 7SK 7SK RNA 8755766 protein-coding Hprt1 hypoxanthine phosphoribosyltransferase 1 ENCODES a protein that exhibits guanine phosphoribosyltransferase activity (ortholog); hypoxanthine phosphoribosyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenine metabolic process (ortholog); AMP salvage (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Diabetes Mellitus (ortholog); familial hypocalciuric hypercalcemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955473 462940 510006 - 102021964 AGCD01053838;AGCD01053839;AGCD01053840;AGCD01053841;AGCD01053842;GBDJ01128098;XM_005401290 XP_005401347 MODEL 8752687 protein-coding Abcf3 ATP binding cassette subfamily F member 3 ASSOCIATED WITH prostate cancer (ortholog) NW_004955420 23271925 23280988 - 102026431 AGCD01021240;GBCQ01005116;XM_005383346 XP_005383403 MODEL 8994070 pseudo LOC102013751 prefoldin subunit 4 pseudogene NW_004955435 13502447 13502856 + 102013751 AGCD01033203 MODEL 8738985 ncrna LOC102011849 uncharacterized LOC102011849 NW_004955411 18463238 18501880 - 102011849 AGCD01012008;AGCD01012009;GBDI01303319;XR_259937 MODEL 9013157 protein-coding Dexi Dexi homolog NW_004955442 7585954 7599413 + 102005514 AGCD01037625;GBDF01049155;XM_005391177;XM_005391178;XM_013518003 XP_005391234;XP_005391235;XP_013373457 MODEL 8747187 pseudo LOC102020874 S-adenosylmethionine decarboxylase proenzyme pseudogene NW_004955403 46310228 46311002 + 102020874 AGCD01002854 MODEL 8923153 protein-coding Efcab9 EF-hand calcium binding domain 9 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sensor activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); spermatogenesis (ortholog); FOUND IN CatSper complex (ortholog); cytoplasm (ortholog); sperm principal piece (ortholog) NW_004955408 24987401 24993284 + 102025216 AGCD01008627;GBDF01114797;XM_005376337 XP_005376394 MODEL 8855320 pseudo LOC102009492 RNA-binding protein with serine-rich domain 1 pseudogene NW_004955415 3192634 3193526 - 102009492 AGCD01015927 MODEL 8699859 ncrna LOC102017533 uncharacterized LOC102017533 NW_004955452 15825925 15829234 - 102017533 AGCD01044500;GBDF01153842;XR_001236006;XR_001236007 MODEL 39134427 misc_rna 7SK 7SK RNA 9039987 ncrna LOC102020147 uncharacterized LOC102020147 NW_004955429 7292109 7331328 + 102020147 AGCD01028588;AGCD01028589;GBDF01110939;XR_261321;XR_261322 MODEL 39132225 rrna 5S_rRNA 5S ribosomal RNA 8934879 protein-coding Itgax integrin subunit alpha X ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); INVOLVED IN cell-cell adhesion mediated by integrin (ortholog); defense response to virus (ortholog); heterotypic cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); integrin alphaX-beta2 complex (ortholog) NW_004955493 8196593 8220296 + 102021138 AGCD01061280;AGCD01061281;AGCD01061282;GBCE01009606;GBCE01009608;XM_013504859 XP_013360313 MODEL 39131986 rrna 5S_rRNA 5S ribosomal RNA 8759185 protein-coding Il13ra1 interleukin 13 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-13 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-13-mediated signaling pathway (ortholog); positive regulation of B cell proliferation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); bronchiolitis obliterans (ortholog); FOUND IN plasma membrane (ortholog) NW_004955534 1157758 1205158 - 102016635 AGCD01070487;GBDI01133443;XM_005410457;XM_013507707 XP_005410514;XP_013363161 MODEL 8981983 ncrna LOC102021611 uncharacterized LOC102021611 NW_004955577 873676 895172 - 102021611 AGCD01075417;GBDF01145731;XR_265081 MODEL 9013849 ncrna LOC102003674 uncharacterized LOC102003674 NW_004955427 13594699 13599884 + 102003674 AGCD01027253;GBDF01143677;XR_001234373 MODEL 9040895 protein-coding LOC102005462 chromosome unknown open reading frame, human C19orf53 NW_004955415 32590287 32592465 + 102005462 AGCD01016726;GBDI01013906;XM_005381066 XP_005381123 MODEL 8744595 protein-coding Emb embigin INVOLVED IN cell adhesion (ortholog); plasma membrane lactate transport (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955446 16716677 16757031 + 102028592 AGCD01040349;GBBH01001163;XM_005392729 XP_005392786 MODEL 9042418 protein-coding LOC102009114 olfactory receptor 1F1-like NW_004955442 14172448 14196764 - 102009114 AGCD01037803;AGCD01037804;AGCD01037805;AGCD01037806;GBDF01061825;XM_005391855 XP_005391912 MODEL 8753053 pseudo LOC102015222 actin-related protein 3 pseudogene NW_004955427 2758614 2760152 + 102015222 AGCD01026904 MODEL 8772652 pseudo LOC102014522 RNA-binding protein 34 pseudogene NW_004956247 1522 4250 - 102014522 AGCD01079308 MODEL 8844765 protein-coding LOC102007982 cytochrome P450 2D17-like NW_004955413 27521610 27655636 - 102007982 AGCD01014511;AGCD01014512;AGCD01014513;AGCD01014514;AGCD01014515;AGCD01014516;AGCD01014517;AGCD01014518;AGCD01014519;AGCD01014520;AGCD01014521;AGCD01014522;AGCD01014523;AGCD01014524;AGCD01014525;AGCD01014526;AGCD01014527;AGCD01014528;AGCD01014529;GBDI01255784;XM_013511457;XM_013511458;XM_013511459;XR_001232980 XP_013366911;XP_013366912;XP_013366913 MODEL 10238139 protein-coding LOC106149898 uncharacterized LOC106149898 NW_004955456 13865208 13938399 - 106149898 AGCD01046626;AGCD01046627;AGCD01046628;AGCD01046629;XM_013520652 XP_013376106 MODEL 8799819 pseudo LOC102007581 glutamate dehydrogenase 1, mitochondrial-like NW_004955433 562648 564548 - 102007581 AGCD01031327 MODEL 8974797 pseudo LOC102014125 bleomycin hydrolase pseudogene NW_004955467 12359001 12362302 + 102014125 AGCD01051631 MODEL 39131569 protein-coding CTXND1 cortexin domain containing 1 9047853 protein-coding Fbxl19 F-box and leucine rich repeat protein 19 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); unmethylated CpG binding (ortholog); zinc ion binding (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH psoriasis (ortholog); psoriatic arthritis (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) NW_004955493 7768802 7798546 + 102023924 AGCD01061225;AGCD01061226;AGCD01061227;GBDF01189934;XM_005405282;XM_005405283;XM_013504751;XM_013504752;XM_013504753;XM_013504754;XM_013504755;XM_013504756 XP_005405339;XP_005405340;XP_013360205;XP_013360206;XP_013360207;XP_013360208;XP_013360209;XP_013360210 MODEL 39133867 misc_rna 7SK 7SK RNA 8880759 ncrna LOC102020492 uncharacterized LOC102020492 NW_004955555 478674 504042 - 102020492 AGCD01073033;AGCD01073034;AGCD01073035;GBDF01009942;XR_001232300 MODEL 8902663 protein-coding Dcst1 DC-STAMP domain containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); sperm-egg recognition (ortholog); FOUND IN plasma membrane (ortholog) NW_004955545 1529926 1545459 + 102022859 AGCD01071859;GBDF01089916;XM_005411560;XM_005411562;XM_005411566 XP_005411617;XP_005411619;XP_005411623 MODEL 8909797 protein-coding Kcna4 potassium voltage-gated channel subfamily A member 4 ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Microcephaly, Cataracts, Impaired Intellectual Development, and Dystonia with Abnormal Striatum (ortholog); FOUND IN asymmetric synapse (ortholog); axon (ortholog); axon initial segment (ortholog) NW_004955476 8621019 8624764 - 102018925 AGCD01055370;XM_005401759 XP_005401816 MODEL 8783087 protein-coding Cx3cr1 C-X3-C motif chemokine receptor 1 ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); C-X3-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); autocrine signaling (ortholog); ASSOCIATED WITH age related macular degeneration 12 (ortholog); anti-basement membrane glomerulonephritis (ortholog); arteriosclerosis (ortholog); FOUND IN cell surface (ortholog); dendritic tree (ortholog); neuronal cell body membrane (ortholog) NW_004955427 24691206 24705599 + 102024484 AGCD01027517;GBCE01117768;XM_005386557 XP_005386614 MODEL 8886905 protein-coding Dok2 docking protein 2 ENCODES a protein that exhibits transmembrane receptor protein tyrosine kinase adaptor activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); Ras protein signal transduction (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Crohn's disease (ortholog); lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 45410689 45421366 - 102028367 AGCD01002814;GBDK01073806;XM_005373638;XM_005373639;XM_013513661 XP_005373695;XP_005373696;XP_013369115 MODEL 8747464 protein-coding Epm2a EPM2A glucan phosphatase, laforin ENCODES a protein that exhibits carbohydrate binding (ortholog); carbohydrate phosphatase activity (ortholog); glycogen binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); cataract (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) NW_004955436 14925452 14982357 + 102005839 AGCD01033880;AGCD01033881;AGCD01033882;GBBH01222266;XM_005389308 XP_005389365 MODEL 8712595 pseudo LOC102008356 kinetochore-associated protein DSN1 homolog pseudogene NW_004955444 350531 351610 - 102008356 AGCD01038664;XM_005392056 MODEL 8789920 pseudo LOC102012995 myb-related protein B pseudogene NW_004955433 16071001 16073415 - 102012995 AGCD01031785 MODEL 8897185 ncrna LOC102010253 uncharacterized LOC102010253 NW_004955415 31218654 31219403 - 102010253 AGCD01016671;GBDF01001956;XR_260330 MODEL 8836354 protein-coding LOC102015624 olfactory receptor 52M1 NW_004955414 20157339 20158292 + 102015624 AGCD01015358;XM_005380049 XP_005380106 MODEL 8726338 protein-coding Anapc4 anaphase promoting complex subunit 4 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) NW_004955443 19620480 19653179 - 102021287 AGCD01038631;GBBH01141916;XM_005392036;XM_005392037 XP_005392093;XP_005392094 MODEL 8948341 protein-coding Cry2 cryptochrome circadian regulator 2 ENCODES a protein that exhibits damaged DNA binding (ortholog); deoxyribodipyrimidine photo-lyase activity (ortholog); DNA (6-4) photolyase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH alcohol withdrawal syndrome (ortholog); chronic myeloid leukemia (ortholog); FOUND IN Cry-Per complex (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955422 2084020 2114980 - 102018839 AGCD01022479;AGCD01022480;GBDF01006250;XM_005384066;XM_013514038 XP_005384123;XP_013369492 MODEL 8817993 ncrna LOC102011396 uncharacterized LOC102011396 NW_004955405 4622780 4660674 - 102011396 AGCD01004650;GBDF01088044;XR_001235203;XR_001235204 MODEL 8723594 ncrna LOC102020878 uncharacterized LOC102020878 NW_004955453 10179788 10183274 - 102020878 AGCD01044782;GBDF01253928;XR_262725;XR_262726 MODEL 8877987 protein-coding LOC102013390 uncharacterized LOC102013390 NW_004955409 845678 869527 + 102013390 AGCD01009168;GBDI01372716;XM_005376615;XM_005376617;XM_005376619;XM_005376621;XM_013510467;XM_013510468;XM_013510469;XM_013510470;XM_013510471;XM_013510472;XR_001232685;XR_001232686;XR_001232687 XP_005376672;XP_005376674;XP_005376676;XP_005376678;XP_013365921;XP_013365922;XP_013365923;XP_013365924;XP_013365925;XP_013365926 MODEL 8957328 protein-coding Abcg1 ATP binding cassette subfamily G member 1 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cellular response to high density lipoprotein particle stimulus (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Colorectal Neoplasms (ortholog); end stage renal disease (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955407 39410262 39459383 - 102015605 AGCD01007825;AGCD01007826;GBCQ01150155;XM_005375832;XM_005375833 XP_005375889;XP_005375890 MODEL 8857160 ncrna LOC102021615 uncharacterized LOC102021615 NW_004955403 17548756 17613098 - 102021615 AGCD01002079;AGCD01002080;GBDF01001507;XR_259181 MODEL 8824295 protein-coding Dffa DNA fragmentation factor subunit alpha ENCODES a protein that exhibits deoxyribonuclease inhibitor activity (ortholog); INVOLVED IN negative regulation of apoptotic DNA fragmentation (ortholog); negative regulation of execution phase of apoptosis (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955486 3273712 3274510 + 102020676 AGCD01059020;XM_013504141 XP_013359595 MODEL 8959390 ncrna LOC102016000 uncharacterized LOC102016000 NW_004955449 11115326 11118395 - 102016000 AGCD01042083;GBDF01178343;XR_262497 MODEL 8782075 pseudo LOC102011017 60S ribosomal protein L7 pseudogene NW_004955423 15037609 15043726 + 102011017 AGCD01023788;AGCD01023789 MODEL 10295339 protein-coding Icam4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN cell-cell adhesion mediated by integrin (ortholog); heterotypic cell-cell adhesion (ortholog); leukocyte cell-cell adhesion (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); plasma membrane (ortholog) NW_004955495 1573444 1575595 + 106146785 AGCD01061703;GBDJ01131667;XM_013505169 XP_013360623 MODEL 8826889 ncrna LOC102024364 uncharacterized LOC102024364 NW_004955428 4671289 4689561 - 102024364 AGCD01027700;GBBH01044020;XR_261294 MODEL 8981652 protein-coding Brat1 BRCA1 associated ATM activator 1 ENCODES a protein that exhibits ribonuclease inhibitor activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH D-bifunctional protein deficiency (ortholog); Dravet syndrome (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955460 12662005 12674223 - 102012169 AGCD01048661;GBDI01062771;XM_005397864;XM_013521148;XM_013521149;XM_013521150;XM_013521151;XM_013521152 XP_005397921;XP_013376602;XP_013376603;XP_013376604;XP_013376605;XP_013376606 MODEL 8969572 pseudo LOC102019065 dnaJ homolog subfamily B member 6-like NW_004955484 9636137 9636807 - 102019065 AGCD01058424 MODEL 8958177 protein-coding LOC102017540 carbonyl reductase [NADPH] 1-like NW_004955407 35259036 35262870 + 102017540 AGCD01007734;AGCD01007735;GBCQ01007849;XM_005375980 XP_005376037 MODEL 8849068 ncrna LOC102013755 uncharacterized LOC102013755 NW_004955436 2073082 2077775 + 102013755 AGCD01033601;GBDF01220311;XR_001234933;XR_261743;XR_261744;XR_261745 MODEL 8831381 ncrna LOC102011851 uncharacterized LOC102011851 NW_004955412 12945686 12959032 - 102011851 AGCD01012826;GBDF01076106;XR_259986 MODEL 8971193 protein-coding Chrnb3 cholinergic receptor nicotinic beta 3 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); bipolar disorder (ortholog); cocaine dependence (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); dopaminergic synapse (ortholog); protein-containing complex (ortholog) NW_004955536 189881 229835 - 102022743 AGCD01070720;AGCD01070721;AGCD01070722;GBDI01244676;XM_013507722 XP_013363176 MODEL 8903505 protein-coding Hps1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN blood coagulation (ortholog); cell morphogenesis (ortholog); eye pigmentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 1 (ortholog); FOUND IN BLOC-3 complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955507 4408428 4433219 - 102013740 AGCD01065648;GBCQ01125128;XM_013506202;XM_013506203;XM_013506204;XR_001231634 XP_013361656;XP_013361657;XP_013361658 MODEL 8720063 protein-coding Gpr35 G protein-coupled receptor 35 ENCODES a protein that exhibits C-X-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); chemokine-mediated signaling pathway (ortholog); cytoskeleton organization (ortholog); FOUND IN plasma membrane (ortholog) NW_004955542 851895 856688 - 102015450 AGCD01071481;GBCE01072681;XM_005411154 XP_005411211 MODEL 8753411 ncrna LOC102009116 uncharacterized LOC102009116 NW_004955561 1295394 1311775 + 102009116 AGCD01073847;AGCD01073848;GBDF01260254;XR_001232356 MODEL 8920890 ncrna LOC102012660 uncharacterized LOC102012660 NW_004955422 11202376 11214424 - 102012660 AGCD01022751;GBDF01159067;XR_260856;XR_260857 MODEL 8884775 protein-coding LOC102014523 uncharacterized LOC102014523 NW_004955451 15062033 15063051 - 102014523 AGCD01043593;GBDI01166058;XM_005394361 XP_005394418 MODEL 9032485 protein-coding Hps3 HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 INVOLVED IN eye pigmentation (ortholog); pigmentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-2 complex (ortholog); cytoplasm (ortholog) NW_004955448 438152 465955 + 102017614 AGCD01041231;AGCD01041232;GBDF01221349;XM_013518625 XP_013374079 MODEL 8981763 ncrna LOC102014127 uncharacterized LOC102014127 NW_004955468 11890174 11900706 - 102014127 AGCD01052139;GBDF01260300;XR_001236905;XR_001236906;XR_263416 MODEL 10203566 ncrna LOC106149899 uncharacterized LOC106149899 NW_004955456 16166475 16176491 + 106149899 AGCD01046692;AGCD01046693;XR_001236365 MODEL 8905145 pseudo LOC102016377 fatty acyl-CoA reductase 1 pseudogene NW_004955475 612776 613779 + 102016377 AGCD01054701 MODEL 39134428 misc_rna 7SK 7SK RNA 9043789 pseudo LOC102009499 60S ribosomal protein L17 pseudogene NW_004955417 3418704 3419219 - 102009499 AGCD01017914 MODEL 8869764 protein-coding Fbxl2 F-box and leucine rich repeat protein 2 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein phosphatase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); protein monoubiquitination (ortholog); protein ubiquitination (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955421 512197 617524 + 102018102 AGCD01021564;AGCD01021565;AGCD01021566;AGCD01021567;AGCD01021568;GBDF01143993;XM_005383637;XM_005383638;XM_013513726;XM_013513727 XP_005383694;XP_005383695;XP_013369180;XP_013369181 MODEL 8981862 pseudo LOC102016001 transcription elongation factor B polypeptide 2 pseudogene NW_004955584 879232 879656 + 102016001 AGCD01075967 MODEL 39131987 rrna 5S_rRNA 5S ribosomal RNA 8700629 protein-coding LOC102014528 lysine-rich nucleolar protein 1-like NW_004955452 3249546 3256640 + 102014528 AGCD01043917;XM_013519455 XP_013374909 MODEL 8932486 protein-coding Dcst2 DC-STAMP domain containing 2 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog) NW_004955545 1518917 1529865 - 102017917 AGCD01071858;AGCD01071859;GBDF01192050;XM_005411539;XM_005411540;XM_013508299;XM_013508301;XM_013508302;XM_013508303;XM_013508304 XP_005411596;XP_005411597;XP_013363753;XP_013363755;XP_013363756;XP_013363757;XP_013363758 MODEL 8751626 pseudo LOC102005464 KATNB1-like protein 1 NW_004955415 14290724 14297874 + 102005464 AGCD01016295 MODEL 8807231 protein-coding Epm2aip1 EPM2A interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of glycogen (starch) synthase activity (ortholog); positive regulation of glycogen biosynthetic process (ortholog); response to insulin (ortholog); ASSOCIATED WITH hereditary nonpolyposis colorectal cancer type 2 (ortholog); Lynch syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); nucleus (ortholog) NW_004955421 3882486 3889851 - 102005049 AGCD01021672;GBDI01180311;XM_005383692 XP_005383749 MODEL 8820496 pseudo LOC102015223 lupus La protein pseudogene NW_004955428 13211453 13212912 + 102015223 AGCD01027944 MODEL 8817424 ncrna LOC102015625 uncharacterized LOC102015625 NW_004955472 3335650 3336983 - 102015625 AGCD01053509;GBDF01013258;XR_263549 MODEL 8955547 protein-coding Il13ra2 interleukin 13 receptor subunit alpha 2 ENCODES a protein that exhibits cytokine receptor activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); immunoglobulin mediated immune response (ortholog); interleukin-13-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog); plasma membrane (ortholog) NW_004955490 708144 758195 + 102026754 AGCD01060082;AGCD01060083;AGCD01060084;AGCD01060085;AGCD01060086;GBCE01123394;XM_005404624;XM_013504555;XM_013504556;XM_013504557;XM_013504558;XM_013504559;XM_013504560 XP_005404681;XP_013360009;XP_013360010;XP_013360011;XP_013360012;XP_013360013;XP_013360014 MODEL 8995565 protein-coding Coro6 coronin 6 ASSOCIATED WITH breast ductal carcinoma (ortholog); COVID-19 (ortholog); invasive ductal carcinoma (ortholog) NW_004955481 3636287 3644330 + 102007013 AGCD01056909;GBDI01211250;XM_005402667;XM_005402668;XM_005402669;XM_005402670 XP_005402724;XP_005402725;XP_005402726;XP_005402727 MODEL 9010348 ncrna LOC102008756 uncharacterized LOC102008756 NW_004955429 17376692 17378662 + 102008756 AGCD01028854;GBDF01303361;XR_001234496 MODEL 39134121 misc_rna 7SK 7SK RNA 39133868 misc_rna 7SK 7SK RNA 8865959 pseudo LOC102020148 protein Smaug homolog 2 pseudogene NW_004955510 3048462 3051086 + 102020148 AGCD01066224 MODEL 39132226 rrna 5S_rRNA 5S ribosomal RNA 8935277 ncrna LOC102009117 uncharacterized LOC102009117 NW_004955563 897520 906409 - 102009117 AGCD01074095;GBDF01019723;XR_001232368;XR_265015 MODEL 8979162 protein-coding Kcna5 potassium voltage-gated channel subfamily A member 5 ENCODES a protein that exhibits alpha-actinin binding (ortholog); delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); membrane hyperpolarization (ortholog); membrane repolarization during atrial cardiac muscle cell action potential (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Brugada syndrome 1 (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN cell surface (ortholog); intercalated disc (ortholog); intracellular canaliculus (ortholog) NW_004955413 2835730 2838761 + 102008299 AGCD01013562;GBDJ01265359;XM_005378748 XP_005378805 MODEL 8960158 protein-coding Dffb DNA fragmentation factor subunit beta ENCODES a protein that exhibits DNA binding (ortholog); DNA nuclease activity (ortholog); enzyme binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); apoptotic DNA fragmentation (ortholog); DNA catabolic process (ortholog); ASSOCIATED WITH Chromosome Breakage (ortholog); transient cerebral ischemia (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955486 7836013 7849875 - 102021247 AGCD01059138;GBDK01277050;XM_005404126;XM_005404127;XM_005404128;XM_005404129;XM_005404131;XM_013504195 XP_005404183;XP_005404184;XP_005404185;XP_005404186;XP_005404188;XP_013359649 MODEL 8961726 protein-coding Cxadr CXADR cell adhesion molecule ENCODES a protein that exhibits beta-catenin binding (ortholog); cell adhesion molecule binding (ortholog); connexin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); AV node cell to bundle of His cell communication (ortholog); AV node cell-bundle of His cell adhesion involved in cell communication (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog) NW_004955407 18894853 18927129 + 102005228 AGCD01007289;GBCE01142120;GBDJ01239347;XM_013503863;XM_013503866 XP_013359317;XP_013359320 MODEL 8960084 ncrna LOC102016381 uncharacterized LOC102016381 NW_004955479 5274664 5282636 - 102016381 AGCD01056342;XR_263735 MODEL 8979663 protein-coding Brca1 BRCA1 DNA repair associated ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to indole-3-methanol (ortholog); cellular response to ionizing radiation (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; forkhead class A signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); bilateral breast cancer (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-BARD1 complex (ortholog); chromosome (ortholog) NW_004955451 16819463 16870780 - 102029928 AGCD01043709;AGCD01043710;AGCD01043711;GBDF01225401;GBDF01304989;JN414194;XM_005394496;XM_013519228;XM_013519229;XM_013519230;XM_013519231;XR_001235969 AEP18221;XP_005394553;XP_013374682;XP_013374683;XP_013374684;XP_013374685 MODEL 9014637 protein-coding Efcc1 EF-hand and coiled-coil domain containing 1 NW_004955450 10494407 10523125 - 102009000 AGCD01042622;AGCD01042623;AGCD01042624;GBBH01206079;GBCE01123547;XM_013518907 XP_013374361 MODEL 8836887 ncrna LOC102013759 uncharacterized LOC102013759 NW_004955437 9463189 9469796 + 102013759 AGCD01034531;AGCD01034532;GBDF01015293;XR_001235074;XR_261869 MODEL 8832321 pseudo LOC102013392 ribosomal L1 domain-containing protein 1 pseudogene NW_004955409 26666765 26667942 - 102013392 AGCD01010196 MODEL 8850279 protein-coding Fbxl20 F-box and leucine rich repeat protein 20 INVOLVED IN behavioral fear response (ortholog); regulation of protein catabolic process at presynapse, modulating synaptic transmission (ortholog); regulation of synaptic vesicle exocytosis (ortholog); FOUND IN glutamatergic synapse (ortholog); Schaffer collateral - CA1 synapse (ortholog); synapse (ortholog) NW_004955451 14097664 14201812 - 102025313 AGCD01043533;AGCD01043534;AGCD01043535;AGCD01043536;AGCD01043537;GBDJ01176814;XM_005394302;XM_005394303;XM_013519186;XM_013519187 XP_005394359;XP_005394360;XP_013374640;XP_013374641 MODEL 8808913 protein-coding LOC102005466 mas-related G-protein coupled receptor member X1 NW_004955476 26643 27677 - 102005466 AGCD01055190;XM_005401897 XP_005401954 MODEL 8874956 pseudo LOC102020879 DNA excision repair protein ERCC-6-like pseudogene NW_004955406 11738677 11748591 - 102020879 AGCD01005895;XM_005374828 MODEL 9065111 ncrna LOC102011020 uncharacterized LOC102011020 NW_004955497 1318649 1323855 + 102011020 AGCD01062456;GBCB01078283;XR_264191 MODEL 9057027 protein-coding LOC102012661 solute carrier family 23 member 1-like NW_004955494 7357079 7405398 + 102012661 AGCD01061551;AGCD01061552;GBDI01178715;XM_005405484;XM_005405485;XM_005405486;XM_013504941;XM_013504942;XM_013504943;XM_013504944 XP_005405541;XP_005405542;XP_005405543;XP_013360395;XP_013360396;XP_013360397;XP_013360398 MODEL 8964926 pseudo LOC102014128 tetraspanin-11-like NW_004955413 1127662 1159892 - 102014128 AGCD01013511 MODEL 8848442 pseudo LOC102019069 transcription intermediary factor 1-beta pseudogene NW_004955486 2153713 2156471 + 102019069 AGCD01058991;AGCD01058992;XM_005404301 MODEL 8989914 pseudo LOC102008359 erythrocyte band 7 integral membrane protein pseudogene NW_004955572 890630 891453 - 102008359 AGCD01074927 MODEL 9021627 protein-coding Icam5 intercellular adhesion molecule 5 INVOLVED IN cell-cell adhesion mediated by integrin (ortholog); homophilic cell-cell adhesion (ortholog); phagocytosis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN dendritic spine membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955495 1575669 1583904 + 102027202 AGCD01061703;GBBH01154350;XM_013505160 XP_013360614 MODEL 10194803 ncrna LOC106149900 uncharacterized LOC106149900 NW_004955456 569714 581804 - 106149900 AGCD01046208;GBDJ01119069;XR_001236366;XR_001236367 MODEL 8785570 pseudo LOC102003677 protein phosphatase 1 regulatory subunit 42-like NW_004955511 3024029 3025033 - 102003677 AGCD01066439 MODEL 8843816 protein-coding LOC102011853 uncharacterized LOC102011853 NW_004955466 8078031 8135745 + 102011853 AGCD01050979;GBDJ01302620;XM_005399163;XM_005399164;XM_013521878 XP_005399220;XP_005399221;XP_013377332 MODEL 8881653 protein-coding Itgb1 integrin subunit beta 1 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); C-X3-C chemokine binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon extension (ortholog); basement membrane organization (ortholog); PARTICIPATES IN altered Reelin signaling pathway; glomerulonephritis pathway; integrin mediated signaling pathway; ASSOCIATED WITH calcinosis (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN cell surface; acrosomal vesicle (ortholog); adherens junction (ortholog) NW_004955462 4454809 4483227 + 102027823 AGCD01049227;GBBH01032241;GBCE01007166;XM_013521440 XP_013376894 MODEL 8727236 protein-coding Dok3 docking protein 3 INVOLVED IN Ras protein signal transduction (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955408 29740606 29747986 - 102029831 AGCD01008770;GBDK01360031;XM_005376448;XM_013506590;XM_013506594 XP_005376505;XP_013362044;XP_013362048 MODEL 8867124 protein-coding LOC102007986 tripartite motif-containing protein 5-like NW_004955414 21541749 21555056 - 102007986 AGCD01015423;GBCQ01013376;XM_005380093;XM_013512002;XM_013512004 XP_005380150;XP_013367456;XP_013367458 MODEL 8750242 ncrna LOC102007586 uncharacterized LOC102007586 NW_004955435 13055123 13064175 + 102007586 AGCD01033177;GBBH01079921;XR_261684 MODEL 8772274 pseudo LOC102011398 ubiquitin-conjugating enzyme E2 D2 pseudogene NW_004955406 14133361 14133789 - 102011398 AGCD01005958 MODEL 8782246 protein-coding Anapc5 anaphase promoting complex subunit 5 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog); spindle (ortholog) NW_004955482 6951496 6980498 + 102017573 AGCD01057433;GBDF01011272;XM_005403131;XM_005403132 XP_005403188;XP_005403189 MODEL 8713505 protein-coding Gpr37 G protein-coupled receptor 37 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); heat shock protein binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to reactive oxygen species (ortholog); dendrite development (ortholog); ASSOCIATED WITH Lewy body dementia (ortholog); malignant mesothelioma (ortholog); Parkinson's disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955479 6061424 6080129 - 102017872 AGCD01056375;GBDF01251628;XM_005402343 XP_005402400 MODEL 8780799 protein-coding Chrnb4 cholinergic receptor nicotinic beta 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); behavioral response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); chronic obstructive pulmonary disease (ortholog); cocaine abuse (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell junction (ortholog); cholinergic synapse (ortholog) NW_004955450 1013897 1030232 - 102013030 AGCD01042349;GBDJ01147141;XM_005393458;XM_005393459 XP_005393515;XP_005393516 MODEL 9014342 ncrna LOC102015224 uncharacterized LOC102015224 NW_004955429 14387394 14393082 + 102015224 AGCD01028781;GBBH01042323;XR_261331 MODEL 8844479 protein-coding Dgat1 diacylglycerol O-acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); acyltransferase activity (ortholog); diacylglycerol binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); fatty acid homeostasis (ortholog); glycerolipid metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH cardiomyopathy (ortholog); chronic kidney disease (ortholog); congenital diarrhea 7 with exudative enteropathy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955454 2933904 2944675 - 102029149 AGCD01045040;GBDK01293190;XM_005395868 XP_005395925 MODEL 8935489 protein-coding Abcg2 ATP binding cassette subfamily G member 2 (JR blood group) ENCODES a protein that exhibits ABC-type sulfate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN angiogenesis (ortholog); asymmetric cell division (ortholog); biotin transport (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; erlotinib pharmacodynamics pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955474 12365903 12408715 + 102025237 AGCD01054660;AGCD01054661;GBCC01000779;GBCQ01064509;XM_005401452 XP_005401509 MODEL 9020960 protein-coding LOC102021619 alcohol dehydrogenase class-3 NW_004955405 9311270 9327919 - 102021619 AGCD01004768;AGCD01004769;GBCQ01008804;XM_005374293 XP_005374350 MODEL 8724412 protein-coding Cubn cubilin ENCODES a protein that exhibits cargo receptor activity (ortholog); hemoglobin binding (ortholog); identical protein binding (ortholog); INVOLVED IN cobalamin catabolic process (ortholog); cobalamin metabolic process (ortholog); cobalamin transport (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); autism spectrum disorder (ortholog); Chronic Benign Proteinuria (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955429 10789674 11038297 + 102028666 AGCD01028680;AGCD01028681;AGCD01028682;AGCD01028683;AGCD01028684;AGCD01028685;GBCQ01008980;XM_005386965 XP_005387022 MODEL 8771879 protein-coding Epn1 epsin 1 ENCODES a protein that exhibits clathrin-cargo adaptor activity (ortholog); molecular sequestering activity (ortholog); transcription factor binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); embryonic organ development (ortholog); endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH middle cerebral artery infarction (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955567 669333 683283 - 102013769 AGCD01074423;AGCD01074424;GBCE01052885;GBCQ01011760;XM_005413292 XP_005413349 MODEL 39131331 protein-coding HPS3 HPS3 biosis of lysosomal organelles complex 2 subunit 1 39133869 misc_rna 7SK 7SK RNA 9009403 protein-coding Efemp1 EGF-like fibulin extracellular matrix protein 1 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955424 27181717 27240067 + 102006046 AGCD01025105;GBCE01000010;XM_005385769 XP_005385826 MODEL 39134429 misc_rna 7SK 7SK RNA 8998012 ncrna LOC102012998 uncharacterized LOC102012998 NW_004955435 13458284 13466728 + 102012998 AGCD01033202;AGCD01033203;XR_261687 MODEL 8888759 protein-coding LOC102010255 deleted in malignant brain tumors 1 protein NW_004955477 966067 1052359 + 102010255 AGCD01055497;AGCD01055498;AGCD01055499;AGCD01055500;AGCD01055501;AGCD01055502;GBDF01198016;XM_013503021 XP_013358475 MODEL 39131988 rrna 5S_rRNA 5S ribosomal RNA 8781384 protein-coding Fbxl21 Putative F-box/LRR-repeat protein 21 INVOLVED IN entrainment of circadian clock by photoperiod (ortholog); protein ubiquitination (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955408 30997793 31012276 + 102012832 AGCD01008819;GBDF01052776;XM_005376488;XM_005376489;XM_005376490;XM_005376491;XM_005376492;XM_005376493;XM_013506760;XM_013506765;XM_013506771;XM_013506777;XM_013506785;XM_013506794 XP_005376545;XP_005376546;XP_005376547;XP_005376548;XP_005376549;XP_005376550;XP_013362214;XP_013362219;XP_013362225;XP_013362231;XP_013362239;XP_013362248 MODEL 8971799 pseudo LOC102016011 microfibrillar-associated protein 1 pseudogene NW_004955662 2333 3692 - 102016011 AGCD01077893 MODEL 8724041 pseudo LOC102014530 S-adenosylmethionine decarboxylase proenzyme-like NW_004955453 16645403 16650249 - 102014530 AGCD01044909 MODEL 8771225 protein-coding Dcstamp dendrocyte expressed seven transmembrane protein INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to macrophage colony-stimulating factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); endometriosis (ortholog); Paget's disease of bone (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog) NW_004955417 28156046 28169481 + 102022816 AGCD01018574;GBDK01042204;XM_005381952;XM_013512745 XP_005382009;XP_013368199 MODEL 9024704 protein-coding Cryaa crystallin alpha A ENCODES a protein that exhibits identical protein binding (ortholog); structural molecule activity (ortholog); unfolded protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); apoptotic process (ortholog); apoptotic process involved in morphogenesis (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); cataract (ortholog); cataract 9 multiple types (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955407 38880088 38892946 - 102004562 AGCD01007813;GBBH01101063;XM_005375792;XM_013506172 XP_005375849;XP_013361626 MODEL 9066991 protein-coding LOC102015626 olfactory receptor 10T2-like NW_004955414 23496142 23497107 + 102015626 AGCD01015500;XM_005380517 XP_005380574 MODEL 8748129 protein-coding Kcna6 potassium voltage-gated channel subfamily A member 6 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); esophageal atresia (ortholog); Flatfoot (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); plasma membrane (ortholog) NW_004955413 2614685 2676292 + 102006231 AGCD01013558;GBDJ01143174;XM_005378741;XM_005378742 XP_005378798;XP_005378799 MODEL 8988544 protein-coding LOC102020494 cytochrome c oxidase subunit 7B, mitochondrial INVOLVED IN central nervous system development (ortholog); ASSOCIATED WITH genetic disease (ortholog); linear skin defects with multiple congenital anomalies 1 (ortholog); linear skin defects with multiple congenital anomalies 2 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955557 1341934 1348610 + 102020494 AGCD01073290;GBCB01003743;XM_005412627 XP_005412684 MODEL 8942501 ncrna LOC102024365 uncharacterized LOC102024365 NW_004955429 22477975 22490414 + 102024365 AGCD01029028;GBDJ01202921;XR_261390;XR_261391 MODEL 8798402 protein-coding Il15 interleukin 15 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to vitamin D (ortholog); extrathymic T cell selection (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); aspergillosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955471 1496352 1583919 - 102011302 AGCD01052985;GBDJ01349954;XM_005400859;XM_005400860;XM_013522919 XP_005400916;XP_005400917;XP_013378373 MODEL 8999503 protein-coding Brca2 BRCA2 DNA repair associated ENCODES a protein that exhibits gamma-tubulin binding (ortholog); histone acetyltransferase activity (ortholog); histone H3 acetyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cell population proliferation (ortholog); cellular response to ionizing radiation (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH atrophy of testis (ortholog); bilateral breast cancer (ortholog); breast cancer (ortholog); FOUND IN BRCA2-MAGE-D1 complex (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955431 13449287 13526878 - 102011896 AGCD01030308;GBCB01111140;JN414336;XM_005387715;XM_005387716;XM_005387717;XM_005387718;XM_005387719;XM_005387720;XM_013515889;XM_013515890 AEP18373;XP_005387772;XP_005387773;XP_005387774;XP_005387775;XP_005387776;XP_005387777;XP_013371343;XP_013371344 MODEL 8911930 pseudo LOC102008757 60S acidic ribosomal protein P0 pseudogene NW_004955429 2174980 2180342 + 102008757 AGCD01028416 MODEL 9040254 protein-coding LOC102009503 olfactory receptor 2V2 NW_004955483 151790 152737 + 102009503 AGCD01057601;XM_005403270 XP_005403327 MODEL 8725211 pseudo LOC102005472 CWF19-like protein 2 NW_004955481 1830281 1834787 + 102005472 AGCD01056855 MODEL 8700718 protein-coding LOC102020150 olfactory receptor 5D18-like NW_004955511 4966254 4966832 + 102020150 AGCD01066541;GBBH01201753;XM_005408081 XP_005408138 MODEL 8891610 protein-coding LOC102017542 uncharacterized LOC102017542 NW_004955408 29103923 29110123 - 102017542 AGCD01008738;GBDF01128626;XM_013509707;XM_013509711;XR_001232479 XP_013365161;XP_013365165 MODEL 8940806 protein-coding Emc1 ER membrane protein complex subunit 1 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH cerebellar atrophy, visual impairment, and psychomotor retardation (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955527 19069 45951 + 102014484 AGCD01069371;AGCD01069372;GBDF01001898;XM_005409788;XM_005409789 XP_005409845;XP_005409846 MODEL 8942136 protein-coding Cuedc1 CUE domain containing 1 NW_004955451 5054633 5124318 + 102005764 AGCD01043162;AGCD01043163;GBCB01001214;XM_005394044;XM_005394045;XM_005394046 XP_005394101;XP_005394102;XP_005394103 MODEL 8907705 ncrna LOC102014129 uncharacterized LOC102014129 NW_004955469 10523201 10529646 + 102014129 AGCD01052536;GBDF01279244;XR_263448 MODEL 8728890 protein-coding LOC102009120 leukocyte-associated immunoglobulin-like receptor 1 NW_004955567 1481960 1491331 - 102009120 AGCD01074476;GBBH01229034;XM_013509284;XM_013509285;XM_013509286;XM_013509287;XM_013509288 XP_013364738;XP_013364739;XP_013364740;XP_013364741;XP_013364742 MODEL 8741554 protein-coding Cxcl10 C-X-C motif chemokine ligand 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955433 748392 750890 - 102012569 AGCD01031336;GBDJ01185780;XM_013516266 XP_013371720 MODEL 8921319 protein-coding LOC102011861 vomeronasal type-1 receptor 90-like NW_004955414 14978145 14979125 - 102011861 AGCD01015166;XM_005380440 XP_005380497 MODEL 9056536 ncrna LOC102013762 uncharacterized LOC102013762 NW_004955442 14446257 14463056 + 102013762 AGCD01037821;GBDF01157306;XR_001235427;XR_001235428;XR_001235429;XR_001235430;XR_262142;XR_262143;XR_262144;XR_262145 MODEL 39134122 misc_rna 7SK 7SK RNA 8940434 protein-coding Anapc7 anaphase promoting complex subunit 7 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); brain development (ortholog); protein branched polyubiquitination (ortholog); ASSOCIATED WITH FERGUSON-BONNI NEURODEVELOPMENTAL SYNDROME (ortholog); syndromic intellectual disability (ortholog); FOUND IN anaphase-promoting complex (ortholog); heterochromatin (ortholog); intercellular bridge (ortholog) NW_004955482 7302853 7328145 - 102020668 AGCD01057454;AGCD01057455;GBCQ01072880;XM_005403142;XM_013503736 XP_005403199;XP_013359190 MODEL 8725381 protein-coding Coro7 coronin 7 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin filament polymerization (ortholog); cell migration (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); trans-Golgi network (ortholog) NW_004955442 13010032 13084897 + 102011815 AGCD01037753;AGCD01037754;AGCD01037755;AGCD01037756;AGCD01037757;GBDF01086615;XM_005391296;XM_005391297;XM_005391298 XP_005391353;XP_005391354;XP_005391355 MODEL 8970210 pseudo LOC102011021 TATA box-binding protein-associated factor RNA polymerase I subunit D pseudogene NW_004955502 102213 103039 + 102011021 AGCD01064232 MODEL 8745085 protein-coding Kcna7 potassium voltage-gated channel subfamily A member 7 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog) NW_004955559 1641388 1645476 + 102020388 AGCD01073655;GBDI01262925;XM_005412981 XP_005413038 MODEL 8819018 protein-coding Dgat2 diacylglycerol O-acyltransferase 2 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); diacylglycerol O-acyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to oleic acid (ortholog); cholesterol homeostasis (ortholog); diacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2A1 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955414 16059781 16089727 - 102022183 AGCD01015197;GBDF01054643;XM_005379877;XM_005379878 XP_005379934;XP_005379935 MODEL 9003816 ncrna LOC102008361 uncharacterized LOC102008361 NW_004955448 3629090 3639590 + 102008361 AGCD01041336;XR_001235764;XR_262459 MODEL 8860249 protein-coding Chrnd cholinergic receptor nicotinic delta subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); musculoskeletal movement (ortholog); regulation of membrane potential (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH centronuclear myopathy (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 3A (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) NW_004955453 3433915 3440534 - 102016444 AGCD01044658;GBBH01073781;XM_005395377;XM_013520002;XM_013520003 XP_005395434;XP_013375456;XP_013375457 MODEL 8706847 pseudo LOC102019085 40S ribosomal protein S11-like NW_004955503 5228501 5228977 - 102019085 AGCD01064700 MODEL 8957780 protein-coding Epn2 epsin 2 INVOLVED IN embryonic organ development (ortholog); in utero embryonic development (ortholog); negative regulation of sprouting angiogenesis (ortholog); FOUND IN clathrin coat of endocytic vesicle (ortholog); postsynaptic endocytic zone (ortholog) NW_004955467 419342 505909 - 102003745 AGCD01051219;AGCD01051220;AGCD01051221;AGCD01051222;AGCD01051223;GBCB01023639;XM_005399274;XM_005399276;XM_005399277 XP_005399331;XP_005399333;XP_005399334 MODEL 8736958 protein-coding Ice1 interactor of little elongation complex ELL subunit 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of intracellular protein transport (ortholog); positive regulation of protein-containing complex assembly (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) NW_004955504 3409431 3465245 + 102023173 AGCD01064868;AGCD01064869;GBBH01050745;GBCE01064782;XM_013505895 XP_013361349 MODEL 9013310 ncrna LOC102010258 uncharacterized LOC102010258 NW_004955416 28137227 28141716 + 102010258 AGCD01017625;GBDF01281711;XR_260429 MODEL 39131990 rrna 5S_rRNA 5S ribosomal RNA 8701060 pseudo LOC102011405 chromodomain Y-like protein pseudogene NW_004955407 28152182 28153855 - 102011405 AGCD01007576 MODEL 8888937 ncrna LOC102013393 uncharacterized LOC102013393 NW_004955410 13697777 13709802 - 102013393 AGCD01010893;GBDF01251247;XR_259838 MODEL 39132227 rrna 5S_rRNA 5S ribosomal RNA 8896681 protein-coding Dct dopachrome tautomerase ENCODES a protein that exhibits dopachrome isomerase activity (ortholog); INVOLVED IN cell development (ortholog); developmental pigmentation (ortholog); melanin biosynthetic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH age related macular degeneration 7 (ortholog); Albinism (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); melanosome (ortholog) NW_004955404 15359402 15395556 + 102020410 AGCD01003541;AGCD01003542;AGCD01003543;XM_005374234 XP_005374291 MODEL 8812282 protein-coding LOC102020495 orphan sodium- and chloride-dependent neurotransmitter transporter NTT5-like NW_004955559 1511172 1525751 + 102020495 AGCD01073647;GBDF01128186;XM_005412896;XM_005412897;XM_005412898 XP_005412953;XP_005412954;XP_005412955 MODEL 8917459 pseudo LOC102012662 protein kinase C iota type pseudogene NW_004955422 13396657 13398480 + 102012662 AGCD01022823 MODEL 9064021 protein-coding LOC102020887 olfactory receptor 6C3 NW_004955458 2745873 2746844 - 102020887 AGCD01047243;XM_005397500 XP_005397557 MODEL 39133870 misc_rna 7SK 7SK RNA 8793078 ncrna LOC102008759 uncharacterized LOC102008759 NW_004955432 20992358 20999001 - 102008759 AGCD01031212;AGCD01031213;GBDF01076071;XR_261539 MODEL 9034732 ncrna LOC102016383 uncharacterized LOC102016383 NW_004955481 10068625 10082092 - 102016383 AGCD01057135;GBDF01119571;XR_263807 MODEL 39134430 misc_rna 7SK 7SK RNA 8699771 protein-coding Hps4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein dimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood coagulation (ortholog); lysosome organization (ortholog); melanocyte differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 1 (ortholog); FOUND IN BLOC-3 complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955455 1048946 1076097 - 102014319 AGCD01045568;GBDI01296596;XM_005396143;XM_013520383;XM_013520384;XM_013520385;XM_013520386;XM_013520387 XP_005396200;XP_013375837;XP_013375838;XP_013375839;XP_013375840;XP_013375841 MODEL 9026561 ncrna LOC102020154 uncharacterized LOC102020154 NW_004955431 15144542 15164404 - 102020154 AGCD01030347;GBDF01276795;XR_001234574 MODEL 8899846 protein-coding LOC102005475 E3 ubiquitin-protein ligase Topors-like NW_004955419 22119355 22127230 - 102005475 AGCD01020294;AGCD01020295;GBDF01224788;XM_005382789 XP_005382846 MODEL 8854453 pseudo LOC102007993 28S ribosomal protein S36, mitochondrial pseudogene NW_004955474 11143140 11143451 - 102007993 AGCD01054611;XM_005401469 MODEL 8866975 pseudo LOC102003679 glutamine synthetase pseudogene NW_004955431 4833847 4835235 + 102003679 AGCD01030014 MODEL 8717809 protein-coding LOC102009512 aldehyde dehydrogenase family 3 member B2-like NW_004955422 17841051 17848453 + 102009512 AGCD01022932;GBDK01152699;XM_005384296 XP_005384353 MODEL 9013676 protein-coding Efemp2 EGF-like fibulin extracellular matrix protein 2 ENCODES a protein that exhibits heparin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aorta development (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); artery development (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); aortic disease (ortholog); aortic dissection (ortholog); FOUND IN basement membrane (ortholog); elastic fiber (ortholog); extracellular matrix (ortholog) NW_004955422 19463090 19470605 + 102026333 AGCD01023010;AGCD01023011;GBBH01165207;XM_005384452;XM_005384453;XM_005384454;XM_013513845 XP_005384509;XP_005384510;XP_005384511;XP_013369299 MODEL 8711525 protein-coding Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); molecular function inhibitor activity (ortholog); NADPH binding (ortholog); INVOLVED IN diaphragm development (ortholog); heart development (ortholog); learning or memory (ortholog); ASSOCIATED WITH hypertension (ortholog); Hypoxia (ortholog); temporal lobe epilepsy (ortholog); FOUND IN axon (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955448 7145471 7553090 + 102018545 AGCD01041401;AGCD01041402;AGCD01041403;AGCD01041404;AGCD01041405;AGCD01041406;AGCD01041407;AGCD01041408;AGCD01041409;AGCD01041410;AGCD01041411;AGCD01041412;AGCD01041413;AGCD01041414;GBDI01387048;XM_005393077;XM_005393078 XP_005393134;XP_005393135 MODEL 8819933 protein-coding Itgb1bp1 integrin subunit beta 1 binding protein 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); integrin binding (ortholog); kinase binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); blood vessel diameter maintenance (ortholog); blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH bone development disease (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955487 5134135 5146449 - 102023705 AGCD01059322;GBDI01067015;XM_005404395 XP_005404452 MODEL 8863310 ncrna LOC102015225 uncharacterized LOC102015225 NW_004955429 21526676 21528190 + 102015225 AGCD01029005;GBDF01223361;XR_261374 MODEL 8968340 protein-coding Emc10 ER membrane protein complex subunit 10 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell migration (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with Dysmorphic Facies and Variable Seizures (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) NW_004955559 672055 676569 - 102018659 AGCD01073607;GBBH01088737;GBCQ01033482;XM_005412783 XP_005412840 MODEL 9054308 protein-coding LOC102011862 uncharacterized LOC102011862 NW_004955474 8241162 8246129 - 102011862 AGCD01054547;GBDF01264907;XM_013502768 XP_013358222 MODEL 8729266 protein-coding Gpr37l1 G protein-coupled receptor 37 like 1 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); peptide binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to reactive oxygen species (ortholog); negative regulation of astrocyte differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) NW_004955406 38214490 38223281 + 102022161 AGCD01006597;GBBH01193715;XM_005375203 XP_005375260 MODEL 8917659 ncrna LOC102021620 uncharacterized LOC102021620 NW_004955405 19288876 19336365 - 102021620 AGCD01005034;AGCD01005035;GBCB01087858;XR_001235414 MODEL 8717373 ncrna LOC102015630 uncharacterized LOC102015630 NW_004955476 6348897 6368660 - 102015630 AGCD01055328;AGCD01055329;AGCD01055330;GBBH01045751;XR_001230802;XR_263624 MODEL 8743252 ncrna LOC102024366 uncharacterized LOC102024366 NW_004955430 7934793 7959906 - 102024366 AGCD01029378;GBDF01190263;XR_001234568;XR_001234569;XR_001234570 MODEL 39134123 misc_rna 7SK 7SK RNA 8932076 protein-coding Cryab crystallin alpha B ENCODES a protein that exhibits amyloid-beta binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process involved in morphogenesis (ortholog); camera-type eye development (ortholog); cellular response to gamma radiation (ortholog); ASSOCIATED WITH adult-onset myofibrillar myopathy 2A (ortholog); cardiomyopathy (ortholog); cataract (ortholog); FOUND IN actin filament bundle (ortholog); axon (ortholog); cardiac myofibril (ortholog) NW_004955412 13626018 13629495 - 102024777 AGCD01012843;GBBH01119901;XM_005378100 XP_005378157 MODEL 8766963 ncrna LOC102013766 uncharacterized LOC102013766 NW_004955443 14635436 14675174 - 102013766 AGCD01038520;GBDF01307300;XR_262206 MODEL 9005928 protein-coding Abcg4 ATP binding cassette subfamily G member 4 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to high density lipoprotein particle stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955412 20256467 20270172 + 102028393 AGCD01013001;GBDI01112120;XM_005378311;XM_013511081 XP_005378368;XP_013366535 MODEL 10247351 ncrna LOC106149901 uncharacterized LOC106149901 NW_004955456 15079998 15082331 + 106149901 AGCD01046662;GBDK01263026;XR_001236368 MODEL 8712010 protein-coding LOC102013001 putative spermatogenesis-associated protein 31D3 NW_004955530 1751228 1756912 - 102013001 AGCD01069899;GBDF01052090;XM_013507542;XM_013507543;XM_013507544 XP_013362996;XP_013362997;XP_013362998 MODEL 8884637 protein-coding Il15ra interleukin 15 receptor subunit alpha ENCODES a protein that exhibits interleukin-15 receptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-15-mediated signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Human Influenza (ortholog); Pneumococcal Pneumonia (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955421 22590168 22612835 - 102009192 AGCD01022140;AGCD01022141;GBDJ01025096;XM_013513670;XM_013513671;XM_013513672 XP_013369124;XP_013369125;XP_013369126 MODEL 9056989 protein-coding Fbxl22 F-box and leucine rich repeat protein 22 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog); Z disc (ortholog) NW_004955450 11719678 11728093 - 102010325 AGCD01042671;AGCD01042672;AGCD01042673;GBDF01281568;GBDK01305141;XM_013518843 XP_013374297 MODEL 8772289 ncrna LOC102014532 uncharacterized LOC102014532 NW_004955407 3140916 3143567 + 102014532 AGCD01006851;GBDF01013999;XR_001231684 MODEL 8967541 protein-coding Cort cortistatin ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); regulation of circadian sleep/wake cycle, sleep (ortholog); ASSOCIATED WITH brain infarction (ortholog) NW_004955486 3152745 3154956 - 102016059 AGCD01059018;GBDI01244129;XM_005404018 XP_005404075 MODEL 8893681 ncrna LOC102007596 uncharacterized LOC102007596 NW_004955441 5524667 5614034 - 102007596 AGCD01036879;AGCD01036880;GBDF01251487;XR_262050 MODEL 8986657 protein-coding Dok4 docking protein 4 INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); nervous system development (ortholog); positive regulation of MAPK cascade (ortholog) NW_004955433 15104387 15116118 - 102027891 AGCD01031745;GBDK01146237;XM_005388394;XM_005388395;XM_005388396;XM_013516206;XM_013516207 XP_005388451;XP_005388452;XP_005388453;XP_013371660;XP_013371661 MODEL 8858720 protein-coding Cuedc2 CUE domain containing 2 INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of macrophage cytokine production (ortholog); proteasomal protein catabolic process (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955485 7969389 7977073 + 102016480 AGCD01058684;GBDF01047348;XM_005403837;XM_005403838;XM_005403839;XM_005403840 XP_005403894;XP_005403895;XP_005403896;XP_005403897 MODEL 9034611 protein-coding Epn3 epsin 3 ENCODES a protein that exhibits EH domain binding (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); recessive dystrophic epidermolysis bullosa (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955451 11209454 11218427 - 102011935 AGCD01043342;GBBH01089702;XM_013519085;XM_013519086;XM_013519088;XM_013519089;XM_013519090 XP_013374539;XP_013374540;XP_013374542;XP_013374543;XP_013374544 MODEL 39131991 rrna 5S_rRNA 5S ribosomal RNA 8848941 protein-coding Ice2 interactor of little elongation complex ELL subunit 2 INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); snRNA transcription by RNA polymerase II (ortholog); snRNA transcription by RNA polymerase III (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); Paranoid Disorders (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) NW_004955450 14462730 14512708 + 102008485 AGCD01042746;AGCD01042747;AGCD01042748;AGCD01042749;GBCQ01066936;GBDJ01274437;XM_013518923 XP_013374377 MODEL 8869583 protein-coding Cxcl11 C-X-C motif chemokine ligand 11 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR chemokine receptor binding (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemokine-mediated signaling pathway (ortholog); ASSOCIATED WITH bacterial pneumonia (ortholog); bronchiolitis obliterans (ortholog); celiac disease (ortholog); FOUND IN membrane (ortholog) NW_004955433 769449 771137 - 102012233 AGCD01031336;GBDJ01304389;XM_013516267 XP_013371721 MODEL 8825724 protein-coding LOC102011407 olfactory receptor 9K2-like NW_004955458 2281743 2282727 + 102011407 AGCD01047223;XM_013520797 XP_013376251 MODEL 39132229 rrna 5S_rRNA 5S ribosomal RNA 8961613 protein-coding Brcc3 BRCA1/BRCA2-containing complex subunit 3 ENCODES a protein that exhibits enzyme regulator activity (ortholog); K63-linked deubiquitinase activity (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); chromatin remodeling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Occupational Diseases (ortholog); Pregnancy in Diabetics (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955594 551407 613772 - 102024964 AGCD01076434;AGCD01076435;GBCB01038463;XM_013509990;XM_013509991 XP_013365444;XP_013365445 MODEL 8703523 protein-coding Angel1 angel homolog 1 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein domain specific binding (ortholog); RNA 2',3'-cyclic phosphatase activity (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, non-stop decay (ortholog); FOUND IN cis-Golgi network (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955438 776213 805020 - 102004006 AGCD01034963;GBDF01001997;XM_005390162;XM_005390163;XM_005390164;XM_005390165;XM_005390166;XM_013517174 XP_005390219;XP_005390220;XP_005390221;XP_005390222;XP_005390223;XP_013372628 MODEL 39133871 misc_rna 7SK 7SK RNA 8782951 ncrna LOC102016013 uncharacterized LOC102016013 NW_004955405 34954226 34974683 + 102016013 AGCD01005388;AGCD01005389;GBDF01253664;XR_259432 MODEL 8793966 pseudo LOC102008760 ATP-dependent RNA helicase DDX50-like NW_004955519 1840874 1843190 - 102008760 AGCD01067909 MODEL 8998018 protein-coding LOC102014132 vomeronasal type-1 receptor 90-like NW_004955414 15099427 15100413 - 102014132 AGCD01015176;XM_005380445 XP_005380502 MODEL 9004012 pseudo LOC102016385 60S ribosomal protein L30-like NW_004955419 3092044 3092797 + 102016385 AGCD01019704 MODEL 9049014 protein-coding Emc2 ER membrane protein complex subunit 2 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog); endoplasmic reticulum (ortholog) NW_004955417 31019389 31048143 + 102003445 AGCD01018638;GBDJ01140382;XM_005381969;XM_005381970;XM_005381971 XP_005382026;XP_005382027;XP_005382028 MODEL 9031881 pseudo LOC102019090 60S ribosomal protein L5 pseudogene NW_004955428 18851546 18852411 - 102019090 AGCD01028072 MODEL 8841048 protein-coding Dgat2l6 diacylglycerol O-acyltransferase 2 like 6 ENCODES a protein that exhibits diacylglycerol O-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog) NW_004955475 9708402 9733712 + 102020004 AGCD01055069;AGCD01055070;AGCD01055071;GBDJ01212951;XM_005401609 XP_005401666 MODEL 9042053 protein-coding Chrne cholinergic receptor nicotinic epsilon subunit ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN monoatomic cation transport (ortholog); regulation of membrane potential (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 4 (ortholog); congenital myasthenic syndrome 4A (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); postsynaptic membrane (ortholog) NW_004955467 10312620 10318700 - 102021111 AGCD01051558;GBCB01098117;XM_005399619;XM_005399621;XM_013522172 XP_005399676;XP_005399678;XP_013377626 MODEL 8742920 ncrna LOC102010261 uncharacterized LOC102010261 NW_004955482 6580525 6586861 - 102010261 AGCD01057403;XR_263839 MODEL 8772156 protein-coding LOC102003680 uncharacterized LOC102003680 NW_004955513 4114603 4116964 + 102003680 AGCD01066920;GBDK01076605;XM_013506579 XP_013362033 MODEL 8786200 protein-coding LOC102009121 zinc finger protein 345-like NW_004955569 1713912 1862497 + 102009121 AGCD01074678;AGCD01074679;AGCD01074680;AGCD01074681;AGCD01074682;AGCD01074683;AGCD01074684;AGCD01074685;AGCD01074686;AGCD01074687;AGCD01074688;AGCD01074689;AGCD01074690;AGCD01074691;AGCD01074692;XM_013509366 XP_013364820 MODEL 8823480 protein-coding Hps5 HPS5 biogenesis of lysosomal organelles complex 2 subunit 2 INVOLVED IN blood coagulation (ortholog); pigmentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-2 complex (ortholog); cytosol (ortholog) NW_004955414 32992669 33028620 - 102018822 AGCD01015794;AGCD01015795;GBDJ01237183;XM_005380409;XM_005380410;XM_005380411;XM_005380412;XM_013511905 XP_005380466;XP_005380467;XP_005380468;XP_005380469;XP_013367359 MODEL 9060829 pseudo LOC102015227 60S ribosomal protein L9 pseudogene NW_004955429 10292015 10297453 + 102015227 AGCD01028669 MODEL 8954381 pseudo LOC102011864 up-regulated during skeletal muscle growth protein 5 pseudogene NW_004955416 8440518 8440842 - 102011864 AGCD01017056;XM_005381302 MODEL 8934381 protein-coding Gpr39 G protein-coupled receptor 39 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adult feeding behavior (ortholog); cellular response to zinc ion (ortholog); cholesterol homeostasis (ortholog) NW_004955440 46648 235644 + 102028580 AGCD01036156;AGCD01036157;AGCD01036158;AGCD01036159;GBDJ01115961;XM_005390734;XM_005390735 XP_005390791;XP_005390792 MODEL 8876793 ncrna LOC102024368 uncharacterized LOC102024368 NW_004955431 15852819 15857933 + 102024368 AGCD01030364;GBDF01280634;XR_261481 MODEL 9052288 pseudo LOC102020891 grpE protein homolog 2, mitochondrial pseudogene NW_004955460 10664409 10665010 - 102020891 AGCD01048600 MODEL 8801401 protein-coding LOC102017543 olfactory receptor 10P1-like NW_004955458 3094534 3095475 + 102017543 AGCD01047270;XM_005397250 XP_005397307 MODEL 39134431 misc_rna 7SK 7SK RNA 8770414 protein-coding LOC102013768 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial ENCODES a protein that exhibits 1-alpha,25-dihydroxyvitamin D3 23-hydroxylase activity (ortholog); 1-alpha,25-dihydroxyvitamin D3 24-hydroxylase activity (ortholog); 25-hydroxycholecalciferol-23-hydroxylase activity (ortholog); INVOLVED IN cellular response to vitamin D (ortholog); osteoblast differentiation (ortholog); response to vitamin D (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); breast carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955445 4874583 4891723 + 102013768 AGCD01039433;GBCQ01006441;XM_005392282 XP_005392339 MODEL 8920298 ncrna LOC102008005 uncharacterized LOC102008005 NW_004955494 6144787 6169872 + 102008005 AGCD01061530;GBDF01223353;XR_001231296;XR_264116 MODEL 8758761 ncrna LOC102005477 uncharacterized LOC102005477 NW_004955420 14717038 14721487 + 102005477 AGCD01020954;GBBH01152513;XR_260717 MODEL 39131992 rrna 5S_rRNA 5S ribosomal RNA 8861157 ncrna LOC102021621 uncharacterized LOC102021621 NW_004955405 29311366 29324168 - 102021621 AGCD01005251;GBDF01207441;XR_259409 MODEL 8969408 pseudo LOC102011022 zinc finger protein 649-like NW_004955503 3712980 3714698 + 102011022 AGCD01064640 MODEL 8946244 protein-coding Efhb EF-hand domain family member B ENCODES a protein that exhibits calcium ion sensor activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of store-operated calcium entry (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955430 11932753 11986985 - 102004190 AGCD01029468;AGCD01029469;AGCD01029470;AGCD01029471;AGCD01029472;GBDJ01405223;XM_005387460;XM_013515691 XP_005387517;XP_013371145 MODEL 8757612 protein-coding Kcnab2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); potassium channel regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); myoblast differentiation (ortholog); neuromuscular process (ortholog); ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) NW_004955486 6371212 6442888 - 102018403 AGCD01059119;GBDF01153905;XM_005404118;XM_005404119;XM_005404121;XM_005404122;XM_013504274;XM_013504275;XM_013504276;XM_013504277;XM_013504278 XP_005404175;XP_005404176;XP_005404178;XP_005404179;XP_013359728;XP_013359729;XP_013359730;XP_013359731;XP_013359732 MODEL 39134124 misc_rna 7SK 7SK RNA 8820435 protein-coding Icmt isoprenylcysteine carboxyl methyltransferase ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity (ortholog); INVOLVED IN bone mineralization (ortholog); C-terminal protein methylation (ortholog); CAAX-box protein maturation (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955486 6280838 6289584 + 102013419 AGCD01059117;GBDF01088371;XM_005404099 XP_005404156 MODEL 8795588 protein-coding Dctd dCMP deaminase ENCODES a protein that exhibits 5-hydroxymethyl-dUMP N-hydrolase activity (ortholog); identical protein binding (ortholog); INVOLVED IN nucleoside salvage (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; gemcitabine pharmacodynamics pathway NW_004955403 25825366 25849511 + 102011934 AGCD01002295;GBCB01003249;XM_005373508 XP_005373565 MODEL 8867283 ncrna LOC102015631 uncharacterized LOC102015631 NW_004955416 19735665 19997148 + 102015631 AGCD01017439;AGCD01017440;AGCD01017441;AGCD01017442;AGCD01017443;AGCD01017444;AGCD01017445;AGCD01017446;AGCD01017447;AGCD01017448;GBCE01037520;XR_001233355;XR_001233356;XR_001233357;XR_001233358;XR_001233359;XR_001233360;XR_001233361;XR_001233362;XR_001233363;XR_001233364 MODEL 8826631 protein-coding LOC102012663 adenylate kinase isoenzyme 1 NW_004955495 3193444 3209238 - 102012663 AGCD01061835;AGCD01061836;AGCD01061837;GBDF01307680;XM_005405718;XR_001231378;XR_264139;XR_264140;XR_264141 XP_005405775 MODEL 8797866 ncrna LOC102020155 uncharacterized LOC102020155 NW_004955433 9188880 9223294 + 102020155 AGCD01031610;AGCD01031611;GBDI01212146;XR_261569 MODEL 9006287 protein-coding Cryba1 crystallin beta A1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); lens development in camera-type eye (ortholog); negative regulation of cytokine production (ortholog); ASSOCIATED WITH age related macular degeneration 1 (ortholog); cataract (ortholog); cataract 10 multiple types (ortholog) NW_004955481 3952976 3986548 - 102011868 AGCD01056924;AGCD01056925;AGCD01056926;GBDJ01396530;XM_013503466 XP_013358920 MODEL 8699698 protein-coding LOC102011408 zinc finger protein 354A NW_004955408 1675669 1691620 + 102011408 AGCD01007971;AGCD01007972;AGCD01007973;GBCB01038314;GBCB01038318;XM_013507993 XP_013363447 MODEL 126903048 protein-coding FBXL22 F-box and leucine rich repeat protein 22 39133872 misc_rna 7SK 7SK RNA 9020772 pseudo LOC102013402 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955413 383694 386168 - 102013402 AGCD01013462 MODEL 8978721 protein-coding Brd1 bromodomain containing 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of erythrocyte differentiation (ortholog); response to electrical stimulus (ortholog); response to immobilization stress (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); bipolar disorder (ortholog); Experimental Seizures (ortholog); FOUND IN dendrite (ortholog); histone H3-K14 acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog) NW_004955413 32935827 32973820 - 102016580 AGCD01014652;GBDK01189055;XM_005379525;XM_005379526;XM_013511532 XP_005379582;XP_005379583;XP_013366986 MODEL 8730248 protein-coding Cotl1 coactosin like F-actin binding protein 1 ENCODES a protein that exhibits actin binding (ortholog); enzyme binding (ortholog); INVOLVED IN defense response to fungus (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) NW_004955541 153542 183965 - 102014395 AGCD01071345;GBBH01000331;GBDI01017951;XM_005410962 XP_005411019 MODEL 8768510 ncrna LOC102016016 uncharacterized LOC102016016 NW_004955406 28620517 28625780 - 102016016 AGCD01006300;XR_259507 MODEL 39134432 misc_rna 7SK 7SK RNA 8776186 protein-coding LOC102007598 keratin, type II cuticular Hb5-like NW_004955547 2695857 2706205 + 102007598 AGCD01072294;GBDK01062119;XM_005411937 XP_005411994 MODEL 8879718 pseudo LOC102019091 SAP domain-containing ribonucleoprotein pseudogene NW_004955428 19048985 19053511 - 102019091 AGCD01028081;XM_005386848 MODEL 8736710 protein-coding Itgb1bp2 integrin subunit beta 1 binding protein 2 ENCODES a protein that exhibits calcium ion binding (ortholog); integrin binding (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN Z disc (ortholog) NW_004955475 10854148 10858802 + 102007424 AGCD01055119;GBCB01022012;XM_005401667 XP_005401724 MODEL 8938727 protein-coding LOC102008010 melanoma-associated antigen 10-like NW_004955498 7052955 7064840 - 102008010 AGCD01063141;AGCD01063142;GBDF01251926;XM_013505532;XM_013505533;XM_013505534;XM_013505535 XP_013360986;XP_013360987;XP_013360988;XP_013360989 MODEL 8851654 protein-coding Dok5 docking protein 5 INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); neuron differentiation (ortholog); positive regulation of MAPK cascade (ortholog) NW_004955445 4439299 4601618 - 102013225 AGCD01039421;AGCD01039422;AGCD01039423;AGCD01039424;GBDI01246760;XM_005392280;XM_013518227 XP_005392337;XP_013373681 MODEL 9005236 ncrna LOC102003682 uncharacterized LOC102003682 NW_004955432 17288234 17299687 - 102003682 AGCD01031120;GBDF01039986;XR_001234642;XR_261531 MODEL 8726923 pseudo LOC102020496 long-chain-fatty-acid--CoA ligase 4 pseudogene NW_004955567 204423 206599 - 102020496 AGCD01074386 MODEL 8746723 protein-coding Cul1 cullin 1 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); cell population proliferation (ortholog); PARTICIPATES IN neddylation pathway; Notch signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Stevens-Johnson syndrome (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog); nucleus (ortholog); Parkin-FBXW7-Cul1 ubiquitin ligase complex (ortholog) NW_004955491 4165400 4212483 + 102026875 AGCD01060419;AGCD01060420;GBDF01010811;XM_005404888 XP_005404945 MODEL 39132231 rrna 5S_rRNA 5S ribosomal RNA 8796823 protein-coding Cxcl12 C-X-C motif chemokine ligand 12 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); CXCR chemokine receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); ameboidal-type cell migration (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; syndecan signaling pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); brain ischemia (ortholog); breast carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog); membrane (ortholog) NW_004955546 1929269 1941690 - 102011699 AGCD01072081;GBDI01001502;XM_005411777;XM_005411778 XP_005411834;XP_005411835 MODEL 10100645 ncrna LOC106149902 uncharacterized LOC106149902 NW_004955456 14900042 14902337 - 106149902 AGCD01046655;GBDF01013677;XR_001236370 MODEL 9060122 pseudo LOC102013004 L-lactate dehydrogenase A chain pseudogene NW_004955537 2130074 2131685 + 102013004 AGCD01070918;XR_264773 MODEL 8776368 protein-coding Chrng cholinergic receptor nicotinic gamma subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); regulation of membrane potential (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); bone development disease (ortholog); congenital myasthenic syndrome (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) NW_004955453 3425603 3432695 - 102014863 AGCD01044658;GBDF01100651;XM_005395371;XM_005395372;XM_005395376 XP_005395428;XP_005395429;XP_005395433 MODEL 8998021 ncrna LOC102014533 uncharacterized LOC102014533 NW_004955407 31629285 31633398 + 102014533 AGCD01007654;GBDF01225227;XR_259596;XR_259597 MODEL 8950525 protein-coding Abcg5 ATP binding cassette subfamily G member 5 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); negative regulation of intestinal cholesterol absorption (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); autosomal dominant tubulointerstitial kidney disease 5 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); ATP-binding cassette (ABC) transporter complex (ortholog) NW_004955441 10964588 10987771 - 102028684 AGCD01037098;GBBH01022720;XM_005390938 XP_005390995 MODEL 8815291 protein-coding Il16 interleukin 16 ENCODES a protein that exhibits CD4 receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN induction of positive chemotaxis (ortholog); leukocyte chemotaxis (ortholog); positive regulation of inflammatory response (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); borna disease (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog) NW_004955416 11876317 11987548 + 102023029 AGCD01017193;AGCD01017194;AGCD01017195;AGCD01017196;GBDI01361041;XM_005381442;XM_005381443;XM_005381444;XM_005381449 XP_005381499;XP_005381500;XP_005381501;XP_005381506 MODEL 9056345 ncrna LOC102011023 uncharacterized LOC102011023 NW_004955504 1257357 1259714 - 102011023 AGCD01064836;GBDF01264466;XR_264285 MODEL 8902302 protein-coding LOC102009513 40S ribosomal protein S27-like NW_004955422 18850193 18850985 - 102009513 AGCD01022964;GBCQ01146185;XM_005384396 XP_005384453 MODEL 8874962 protein-coding LOC102020892 uncharacterized LOC102020892 NW_004955461 9951120 9952974 - 102020892 AGCD01048952;GBDF01046379;XM_005398045 XP_005398102 MODEL 8894735 pseudo LOC102014133 lysocardiolipin acyltransferase 1 pseudogene NW_004955472 3041379 3042600 - 102014133 AGCD01053499 MODEL 8809252 pseudo LOC102016386 eukaryotic initiation factor 4A-I-like NW_004955419 15570893 15571641 - 102016386 AGCD01020083 MODEL 8934062 ncrna LOC102010262 uncharacterized LOC102010262 NW_004955482 9098479 9099552 - 102010262 AGCD01057562;GBDF01226253;XR_263851 MODEL 9067501 protein-coding Epo erythropoietin ENCODES a protein that exhibits cytokine activity (ortholog); erythropoietin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN acute-phase response (ortholog); apoptotic process (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN erythropoietin signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Subdural Hematoma (ortholog); Acute-Phase Reaction (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); extracellular space (ortholog) NW_004955573 203875 206078 - 102013562 AGCD01074966;GBDF01164330;XM_005413690 XP_005413747 MODEL 8932661 protein-coding LOC102005483 olfactory receptor 4B1-like NW_004955422 365286 366218 - 102005483 AGCD01022404;XM_005384937 XP_005384994 MODEL 9061206 protein-coding Il17a interleukin 17A ENCODES a protein that exhibits cytokine activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); cellular response to interleukin-1 (ortholog); defense response to fungus (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acne (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955411 5896435 5899911 - 102029486 AGCD01011666;GBDF01098022;XM_005377658 XP_005377715 MODEL 8741062 pseudo LOC102015228 polypyrimidine tract-binding protein 1-like NW_004955431 9288464 9290138 - 102015228 AGCD01030171 MODEL 8981707 protein-coding Dgcr2 DiGeorge syndrome critical region gene 2 INVOLVED IN cognition (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH autistic disorder (ortholog); DiGeorge syndrome (ortholog); schizophrenia (ortholog); FOUND IN membrane (ortholog) NW_004955442 18857222 18938552 + 102013222 AGCD01038022;AGCD01038023;AGCD01038024;GBDF01052698;XM_005391789;XM_005391790;XM_005391791;XM_005391792 XP_005391846;XP_005391847;XP_005391848;XP_005391849 MODEL 39132232 rrna 5S_rRNA 5S ribosomal RNA 9016750 protein-coding Angel2 angel homolog 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA 2',3'-cyclic phosphatase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); mitochondrial mRNA 3'-end processing (ortholog); negative regulation of mitotic cell cycle (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) NW_004955406 4589849 4606380 + 102015920 AGCD01005697;AGCD01005698;AGCD01005699;GBDF01055236;XM_005374730;XM_005374732;XM_005374733;XM_013520014;XM_013520031 XP_005374787;XP_005374789;XP_005374790;XP_013375468;XP_013375485 MODEL 8708669 ncrna LOC102020158 uncharacterized LOC102020158 NW_004955527 937906 940168 + 102020158 AGCD01069387;GBDF01019742;XR_264665 MODEL 8884441 protein-coding Kcnab3 potassium voltage-gated channel subfamily A regulatory beta subunit 3 NW_004955467 9013279 9020716 + 102028396 AGCD01051481;GBDI01102311;XM_005399448 XP_005399505 MODEL 8782194 pseudo LOC102013771 protein FRG1 pseudogene NW_004955446 2803183 2803945 - 102013771 AGCD01039987 MODEL 9054203 ncrna LOC102008766 uncharacterized LOC102008766 NW_004955435 5849029 5853706 - 102008766 AGCD01032901;AGCD01032902;GBDF01188936;XR_261666 MODEL 8959247 ncrna LOC102008363 uncharacterized LOC102008363 NW_004955449 1293468 1297009 + 102008363 AGCD01041795;GBDF01187862;XR_262482 MODEL 39133302 misc_rna 7SK 7SK RNA 8995791 protein-coding LOC102013405 cytochrome P450 2D17-like NW_004955413 27621018 27639195 - 102013405 AGCD01014521;AGCD01014522;AGCD01014523;AGCD01014524;AGCD01014525;AGCD01014526;GBBH01145942;XM_013511462 XP_013366916 MODEL 8715715 protein-coding Fbxl3 F-box and leucine rich repeat protein 3 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN entrainment of circadian clock by photoperiod (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein destabilization (ortholog); ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH SHORT STATURE, FACIAL ANOMALIES, AND SPEECH DEFECTS (ortholog); progressive myoclonus epilepsy (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955404 30215140 30229798 + 102019461 AGCD01004001;GBCE01095386;GBDK01093958;XM_005374164 XP_005374221 MODEL 8768024 ncrna LOC102021625 uncharacterized LOC102021625 NW_004955454 1559046 1567112 + 102021625 AGCD01044973;GBCE01105695;XR_001236256;XR_001236257 MODEL 8961738 protein-coding Brd10 bromodomain containing 10 NW_004955434 9904255 9991651 - 102005499 AGCD01032314;AGCD01032315;AGCD01032316;GBCQ01124872;GBDJ01028811;XM_013516351 XP_013371805 MODEL 8777377 protein-coding COX1 cytochrome c oxidase subunit I MT 5331 6875 + 15822225 JX312692 AFQ55779;YP_008080747 REVIEWED 8841385 ncrna LOC102008011 uncharacterized LOC102008011 NW_004955426 3353899 3375511 + 102008011 AGCD01026078;GBDI01255537;XR_261184;XR_261185 MODEL 8834281 protein-coding LOC102003683 taste receptor type 2 member 7-like NW_004955432 18798901 18799800 + 102003683 AGCD01031161;XM_005388153 XP_005388210 MODEL 8868948 protein-coding Gpr4 G protein-coupled receptor 4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); angiogenesis involved in wound healing (ortholog); cellular response to acidic pH (ortholog); FOUND IN plasma membrane (ortholog) NW_004955574 85619 87928 - 102014400 AGCD01075084;GBDK01306170;XM_005413788 XP_005413845 MODEL 9001999 protein-coding Epor erythropoietin receptor ENCODES a protein that exhibits erythropoietin receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to kainic acid (ortholog); decidualization (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); Brain Hypoxia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955495 2293587 2299302 - 102022714 AGCD01061763;GBCQ01062324;XM_005405664 XP_005405721 MODEL 8970645 protein-coding Dok6 docking protein 6 ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog) NW_004955402 53029311 53454223 + 102005091 AGCD01001355;AGCD01001356;AGCD01001357;AGCD01001358;AGCD01001359;AGCD01001360;AGCD01001361;AGCD01001362;AGCD01001363;AGCD01001364;AGCD01001365;GBCE01160891;XM_005373053 XP_005373110 MODEL 8715479 protein-coding Itgb2 integrin subunit beta 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); cargo receptor activity (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); amyloid-beta clearance (ortholog); cell adhesion (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; integrin mediated signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute promyelocytic leukemia (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); integrin alphaD-beta2 complex (ortholog) NW_004955407 41779849 41805637 - 102010671 AGCD01007882;GBBH01033820;XM_005375904;XM_005375905;XM_005375906;XM_013505502;XM_013505508;XM_013505517;XM_013505519;XM_013505523 XP_005375961;XP_005375962;XP_005375963;XP_013360956;XP_013360962;XP_013360971;XP_013360973;XP_013360977 MODEL 8926760 protein-coding LOC102013015 mastin-like NW_004955442 15945683 15947421 + 102013015 AGCD01037888;GBDF01098386;XM_013517711 XP_013373165 MODEL 9015771 protein-coding Emc3 ER membrane protein complex subunit 3 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955561 1442953 1459988 - 102016760 AGCD01073855;GBDF01004644;XM_005413063 XP_005413120 MODEL 8776800 protein-coding Dctn1 dynactin subunit 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN axonal transport (ortholog); centriole-centriole cohesion (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN mitochondria transport pathway; N-cadherin signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); FOUND IN cell cortex (ortholog); cell leading edge (ortholog); centriolar subdistal appendage (ortholog) NW_004955424 11362240 11413140 + 102028987 AGCD01024564;AGCD01024565;AGCD01024566;GBCQ01014965;XM_005385510;XM_005385512;XM_005385513;XM_005385514;XM_005385515;XM_005385516;XM_013514618;XM_013514619;XM_013514620 XP_005385567;XP_005385569;XP_005385570;XP_005385571;XP_005385572;XP_005385573;XP_013370072;XP_013370073;XP_013370074 MODEL 8937658 protein-coding LOC102015637 dipeptidase 2 NW_004955484 8715037 8729483 + 102015637 AGCD01058394;AGCD01058395;GBDF01235917;XM_005403597;XM_005403598;XM_005403599;XM_005403600;XM_005403601;XM_013503879;XM_013503880;XM_013503881 XP_005403654;XP_005403655;XP_005403656;XP_005403657;XP_005403658;XP_013359333;XP_013359334;XP_013359335 MODEL 39131993 rrna 5S_rRNA 5S ribosomal RNA 8862313 ncrna LOC102011865 uncharacterized LOC102011865 NW_004955477 3946286 3949237 + 102011865 AGCD01055577;GBDF01098162;XR_263654 MODEL 8767974 protein-coding LOC102020497 uncharacterized LOC102020497 NW_004955568 63033 69208 + 102020497 AGCD01074502;XM_013509327 XP_013364781 MODEL 8758605 pseudo LOC102024369 mitochondrial import receptor subunit TOM20 homolog pseudogene NW_004955432 8593440 8593852 + 102024369 AGCD01030884 MODEL 39134125 misc_rna 7SK 7SK RNA 8746306 protein-coding LOC102013406 olfactory receptor 6-like NW_004955414 22692862 22693770 - 102013406 AGCD01015471;GBBH01130436;XM_005380511 XP_005380568 MODEL 8700974 pseudo LOC102005496 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955433 1844022 1845319 - 102005496 AGCD01031371 MODEL 9012667 pseudo LOC102017544 L-lactate dehydrogenase A chain pseudogene NW_004955458 4711786 4713302 + 102017544 AGCD01047431 MODEL 8786433 protein-coding LOC102012664 guanylate-binding protein 5 NW_004955423 5021524 5040124 + 102012664 AGCD01023551;AGCD01023552;AGCD01023553;GBDK01006467;XM_005385100 XP_005385157 MODEL 8987696 pseudo LOC102014536 ATP synthase mitochondrial F1 complex assembly factor 1 pseudogene NW_004955457 8252912 8255146 - 102014536 AGCD01046907 MODEL 8913815 ncrna LOC102003684 uncharacterized LOC102003684 NW_004955520 82188 91113 - 102003684 AGCD01068004;GBDI01367358;XR_264580 MODEL 8825727 pseudo LOC102011411 60S ribosomal protein L18a pseudogene NW_004955459 4048909 4049495 + 102011411 AGCD01048022 MODEL 9011354 protein-coding LOC102020901 killer cell lectin-like receptor 6 NW_004955413 7305360 7314993 + 102020901 AGCD01013812;AGCD01013813;XM_005379619 XP_005379676 MODEL 8947444 pseudo LOC102011024 cyclin-G1-like NW_004955505 3590543 3591876 + 102011024 AGCD01065032 MODEL 8742580 protein-coding Cryba2 crystallin beta A2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 42 (ortholog); cerebrotendinous xanthomatosis (ortholog) NW_004955453 14438658 14444469 + 102027938 AGCD01044864;GBDF01088102;XM_005395611;XM_005395616;XM_005395617;XM_005395618;XM_005395619;XM_013519773;XM_013519774;XM_013519775;XM_013519776 XP_005395668;XP_005395673;XP_005395674;XP_005395675;XP_005395676;XP_013375227;XP_013375228;XP_013375229;XP_013375230 MODEL 8838936 ncrna LOC102009517 uncharacterized LOC102009517 NW_004955423 4665440 4705460 + 102009517 AGCD01023541;AGCD01023542;AGCD01023543;GBDF01110689;XR_260953 MODEL 8757524 protein-coding Hps6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); GTP-dependent protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN blood coagulation (ortholog); lipid homeostasis (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-2 complex (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) NW_004955485 8270997 8273060 - 102016387 AGCD01058705;GBBH01193774;GBCB01130027;XM_013504129 XP_013359583 MODEL 8729616 protein-coding LOC102014140 olfactory receptor 4C12-like NW_004955422 189242 205026 - 102014140 AGCD01022401;GBDF01176192;XM_005383941;XM_013514328 XP_005383998;XP_013369782 MODEL 9050136 protein-coding Angpt1 angiopoietin 1 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN activation of transmembrane receptor protein tyrosine kinase activity (ortholog); angiogenesis (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN angiopoietin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); brain ischemia (ortholog); diabetic retinopathy (ortholog); FOUND IN extracellular space (ortholog); membrane raft (ortholog); microvillus (ortholog) NW_004955417 30199508 30386695 - 102028535 AGCD01018618;AGCD01018619;AGCD01018620;GBCB01098477;GBDJ01356193;XM_005381965 XP_005382022 MODEL 39134433 misc_rna 7SK 7SK RNA 8860675 ncrna LOC102007599 uncharacterized LOC102007599 NW_004955556 1440615 1452951 + 102007599 AGCD01073194;GBCE01045813;XR_264977 MODEL 9054702 protein-coding Abcg8 ATP binding cassette subfamily G member 8 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); negative regulation of intestinal cholesterol absorption (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); ATP-binding cassette (ABC) transporter complex (ortholog); plasma membrane (ortholog) NW_004955441 10982307 11004789 + 102027905 AGCD01037098;GBDF01226499;XM_005390935;XM_005390936 XP_005390992;XP_005390993 MODEL 8986325 pseudo LOC102016019 receptor-interacting serine/threonine-protein kinase 1 pseudogene NW_004955406 7239021 7248768 + 102016019 AGCD01005767 MODEL 8834003 protein-coding LOC102020160 disintegrin and metalloproteinase domain-containing protein 32-like NW_004955536 3191220 3334848 - 102020160 AGCD01070812;AGCD01070813;AGCD01070814;AGCD01070815;AGCD01070816;AGCD01070817;GBDF01006513;XM_013507728 XP_013363182 MODEL 8912012 ncrna LOC102013017 uncharacterized LOC102013017 NW_004955444 2369111 2395806 - 102013017 AGCD01038759;AGCD01038760;AGCD01038761;GBDJ01063177;XR_001235512;XR_001235513;XR_001235514 MODEL 8907701 pseudo LOC102013772 transformer-2 protein homolog alpha-like NW_004955446 12839992 12840785 - 102013772 AGCD01040244 MODEL 8738905 protein-coding LOC102009123 transmembrane protease serine 11E NW_004955447 4505454 4611439 + 102009123 AGCD01040721;AGCD01040722;AGCD01040723;AGCD01040724;AGCD01040725;GBDF01013955;XM_005392824;XM_005392826;XM_013518541 XP_005392881;XP_005392883;XP_013373995 MODEL 8768251 protein-coding Kcnb1 potassium voltage-gated channel subfamily B member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 26 (ortholog); Diaphragmatic Hernia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); cell surface (ortholog) NW_004955445 8680979 8779662 + 102005644 AGCD01039611;AGCD01039612;GBBH01197243;XM_005392330 XP_005392387 MODEL 8940113 pseudo LOC102008769 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955536 609566 611847 + 102008769 AGCD01070732 MODEL 39133308 misc_rna 7SK 7SK RNA 8838313 pseudo LOC102015231 epithelial membrane protein 1 pseudogene NW_004955433 22945510 22945958 - 102015231 AGCD01031949 MODEL 10359006 ncrna LOC106149903 uncharacterized LOC106149903 NW_004955456 5894387 5943914 + 106149903 AGCD01046357;AGCD01046358;GBDJ01298811;XR_001236371;XR_001236372 MODEL 8747811 protein-coding Icos inducible T cell costimulator ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); T cell costimulation (ortholog); T cell tolerance induction (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); arteriosclerosis (ortholog); celiac disease (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955457 10934390 10952318 - 102021098 AGCD01046960;GBDI01295537;XM_005397010;XM_005397011 XP_005397067;XP_005397068 MODEL 8845998 protein-coding Il17b interleukin 17B ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Keratoconus 1 (ortholog) NW_004955415 5037270 5047405 + 102024451 AGCD01015989;GBBH01011723;XM_005380607;XM_005380608;XM_005380609;XM_005380610;XM_005380611;XM_013512106;XM_013512107 XP_005380664;XP_005380665;XP_005380666;XP_005380667;XP_005380668;XP_013367560;XP_013367561 MODEL 8946633 ncrna LOC102021628 uncharacterized LOC102021628 NW_004955407 40113326 40117575 + 102021628 AGCD01007838;GBDF01144645;XR_259633 MODEL 8880750 protein-coding Dgcr6l DiGeorge syndrome critical region gene 6 like ASSOCIATED WITH prostate cancer (ortholog) NW_004955442 17810570 17815905 + 102020386 AGCD01037986;GBDF01004537;XM_005391720 XP_005391777 MODEL 8885008 protein-coding Chst1 carbohydrate sulfotransferase 1 ENCODES a protein that exhibits keratan sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN galactose metabolic process (ortholog); keratan sulfate proteoglycan biosynthetic process (ortholog); sulfur compound metabolic process (ortholog) NW_004955422 2269791 2274714 + 102020454 AGCD01022483;GBCE01155996;XM_005384071 XP_005384128 MODEL 8706866 ncrna LOC102020499 uncharacterized LOC102020499 NW_004955574 228074 230012 + 102020499 AGCD01075093;GBCB01123138;XR_265057;XR_265058 MODEL 8761605 protein-coding Cul2 cullin 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH inflammatory bowel disease (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955462 2580117 2659849 + 102019037 AGCD01049176;AGCD01049177;GBDI01222773;XM_005398124;XM_013521460;XM_013521461;XM_013521462 XP_005398181;XP_013376914;XP_013376915;XP_013376916 MODEL 8747116 protein-coding LOC102019093 vomeronasal type-1 receptor 90-like NW_004955429 12472731 12473747 - 102019093 AGCD01028719;XM_005387251 XP_005387308 MODEL 8752508 protein-coding Eppk1 epiplakin 1 ENCODES a protein that exhibits intermediate filament binding (ortholog); keratin filament binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); intermediate filament bundle assembly (ortholog); intermediate filament organization (ortholog); ASSOCIATED WITH Chloracne (ortholog); myoepithelioma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basal part of cell (ortholog); bicellular tight junction (ortholog) NW_004955454 2512151 2526080 - 102015600 AGCD01045022;GBCE01166943;XM_005395819 XP_005395876 MODEL 8807542 protein-coding LOC102016389 olfactory receptor 4B1-like NW_004955422 316985 318321 + 102016389 AGCD01022404;XM_005383950 XP_005384007 MODEL 8982386 protein-coding LOC102010274 cationic trypsin NW_004955494 1011732 1014914 - 102010274 AGCD01061390;XM_005405392 XP_005405449 MODEL 8871301 protein-coding Efhc1 EF-hand domain containing 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN cerebral cortex cell migration (ortholog); flagellated sperm motility (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); childhood absence epilepsy (ortholog); epilepsy (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955411 5624510 5676165 - 102012618 AGCD01011654;GBBH01114393;GBDF01002191;XM_013510761 XP_013366215 MODEL 39131994 rrna 5S_rRNA 5S ribosomal RNA 8924457 protein-coding Dctn2 dynactin subunit 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); spectrin binding (ortholog); INVOLVED IN melanosome transport (ortholog); microtubule-based process (ortholog); mitotic metaphase chromosome alignment (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); synucleinopathy (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); dynactin complex (ortholog) NW_004955458 5247871 5264424 - 102005776 AGCD01047470;GBDF01009997;XM_005397395;XM_005397396;XM_005397397 XP_005397452;XP_005397453;XP_005397454 MODEL 8745040 protein-coding Cxcl13 C-X-C motif chemokine ligand 13 ENCODES a protein that exhibits CCR10 chemokine receptor binding (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); B cell chemotaxis (ortholog); B cell chemotaxis across high endothelial venule (ortholog); ASSOCIATED WITH endometriosis (ortholog); Experimental Liver Cirrhosis (ortholog); malignant mesothelioma (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955433 2123190 2129119 + 102017597 AGCD01031382;GBDF01093996;XM_005388194 XP_005388251 MODEL 8944003 ncrna LOC102008014 uncharacterized LOC102008014 NW_004955427 4746086 4759360 - 102008014 AGCD01026973;GBDF01305344;XR_261235 MODEL 8943102 ncrna LOC102024370 uncharacterized LOC102024370 NW_004955514 4624748 4630551 + 102024370 AGCD01067139;GBDF01039693;XR_264512 MODEL 8998336 protein-coding Gpr45 G protein-coupled receptor 45 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); protein carrier chaperone (ortholog); FOUND IN ciliary membrane (ortholog) NW_004955470 10166164 10169031 + 102026099 AGCD01052857;GBCQ01030771;XM_005400779 XP_005400836 MODEL 8959490 protein-coding LOC102020905 olfactory receptor 52B4-like NW_004955414 20025872 20026816 + 102020905 AGCD01015351;XM_005380463 XP_005380520 MODEL 8719840 protein-coding LOC102009525 sperm motility kinase 2B-like NW_004955429 13400335 13403083 + 102009525 AGCD01028747;GBDK01097126;XM_005386993 XP_005387050 MODEL 9038940 pseudo LOC102008374 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955452 16615403 16615951 + 102008374 AGCD01044520 MODEL 8964593 protein-coding Dok7 docking protein 7 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN enzyme-linked receptor protein signaling pathway (ortholog); neuromuscular junction development (ortholog); positive regulation of protein phosphorylation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 10 (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN mitochondrion (ortholog); neuromuscular junction (ortholog); nucleoplasm (ortholog) NW_004955514 2166263 2190211 + 102004414 AGCD01067074;AGCD01067075;GBCQ01016401;XM_005408763;XM_005408764;XM_013506796 XP_005408820;XP_005408821;XP_013362250 MODEL 8860223 pseudo LOC102014141 transmembrane protein 183A-like NW_004955422 11446152 11447336 - 102014141 AGCD01022757 MODEL 8711089 protein-coding Angpt2 angiopoietin 2 ENCODES a protein that exhibits receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ regeneration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcohol-associated liver disease (ortholog); angiosarcoma (ortholog); FOUND IN cell projection (ortholog); extracellular space (ortholog) NW_004955403 54139823 54193740 + 102009568 AGCD01003089;GBCQ01175373;XM_005373846 XP_005373903 MODEL 9032631 protein-coding Fbxl4 F-box and leucine rich repeat protein 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); negative regulation of mitophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); mitochondrial DNA depletion syndrome (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955411 24757445 24814642 - 102022175 AGCD01012138;GBCB01042587;XM_005377798 XP_005377855 MODEL 8805796 protein-coding LOC102013019 nuclear factor interleukin-3-regulated protein NW_004955563 825025 844211 - 102013019 AGCD01074090;AGCD01074091;XM_005413205 XP_005413262 MODEL 39132233 rrna 5S_rRNA 5S ribosomal RNA 8796085 ncrna LOC102008772 uncharacterized LOC102008772 NW_004955442 14332729 14334118 - 102008772 AGCD01037810;GBBH01025947;XR_001235407 MODEL 8703793 pseudo LOC102011867 josephin-1-like NW_004955417 14417553 14418271 + 102011867 AGCD01018204 MODEL 8760038 protein-coding Abhd1 abhydrolase domain containing 1 NW_004955469 9092074 9097635 + 102021232 AGCD01052489;GBDF01176276;XM_005400458;XM_005400459;XM_005400460;XM_005400461 XP_005400515;XP_005400516;XP_005400517;XP_005400518 MODEL 8837354 protein-coding Hpse heparanase ENCODES a protein that exhibits heparanase activity (ortholog); syndecan binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); cell-matrix adhesion (ortholog); establishment of endothelial barrier (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); IgA glomerulonephritis (ortholog); FOUND IN endosome (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955474 6367467 6394395 + 102004380 AGCD01054474;AGCD01054475;GBBH01007038;GBDI01357505;XM_013502790 XP_013358244 MODEL 39134126 misc_rna 7SK 7SK RNA 9018161 protein-coding Cox15 cytochrome c oxidase assembly factor COX15 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-CH group of donors (ortholog); INVOLVED IN cytochrome complex assembly (ortholog); heme A biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH cardiomyopathy (ortholog); cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); FOUND IN cytochrome complex (ortholog); mitochondrion (ortholog) NW_004955507 5600605 5617556 - 102017801 AGCD01065680;GBDK01358382;XM_005407677 XP_005407734 MODEL 8857593 ncrna LOC102012665 uncharacterized LOC102012665 NW_004955425 2406340 2448278 - 102012665 AGCD01025262;AGCD01025263;GBDF01006731;XR_261120 MODEL 8953768 pseudo LOC102017545 neurofilament heavy polypeptide pseudogene NW_004955408 5855363 5857838 + 102017545 AGCD01008158 MODEL 8774683 ncrna LOC102021630 uncharacterized LOC102021630 NW_004955456 15990135 16004134 + 102021630 AGCD01046681;GBDF01030945;XR_001236355 MODEL 8832307 pseudo LOC102011028 40S ribosomal protein S8 pseudogene NW_004955510 5851568 5852288 - 102011028 AGCD01066294 MODEL 8721815 pseudo LOC102013028 protein-lysine N-methyltransferase N6AMT2 pseudogene NW_004955587 123785 124367 - 102013028 AGCD01076059 MODEL 8773613 protein-coding Emc4 ER membrane protein complex subunit 4 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955416 375736 380825 - 102019059 AGCD01016798;GBCB01023546;XM_005381153 XP_005381210 MODEL 8840949 protein-coding LOC102019094 mammaglobin-A-like NW_004955511 6298385 6301018 - 102019094 AGCD01066600;XM_005408170 XP_005408227 MODEL 39134434 misc_rna 7SK 7SK RNA 8728125 protein-coding LOC102007601 kallikrein-4-like NW_004955558 1612493 1615729 + 102007601 AGCD01073453;XM_005412748 XP_005412805 MODEL 8774666 protein-coding Cryba4 crystallin beta A4 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of eye lens (ortholog); INVOLVED IN camera-type eye development (ortholog); visual perception (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 23 (ortholog); genetic disease (ortholog) NW_004955455 1176668 1187731 + 102017536 AGCD01045570;GBDI01100472;XM_005396157 XP_005396214 MODEL 8890490 protein-coding Itgb3 integrin subunit beta 3 ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); cell adhesion molecule binding (ortholog); cell adhesion receptor activity (ortholog); INVOLVED IN apolipoprotein A-I-mediated signaling pathway (ortholog); apoptotic cell clearance (ortholog); blood coagulation, fibrin clot formation (ortholog); PARTICIPATES IN abciximab pharmacodynamics pathway; ephrin - ephrin receptor bidirectional signaling axis; eptifibatide pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myeloid leukemia (ortholog); Arterial Occlusive Diseases (ortholog); FOUND IN alpha9-beta1 integrin-ADAM8 complex (ortholog); alphav-beta3 integrin-HMGB1 complex (ortholog); alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog) NW_004955478 9788192 9830254 - 102010257 AGCD01056097;AGCD01056098;GBDI01278989;XM_005402248 XP_005402305 MODEL 9050020 protein-coding Brd2 bromodomain containing 2 ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); histone H3K14ac reader activity (ortholog); histone H4K12ac reader activity (ortholog); INVOLVED IN chromatin looping (ortholog); neural tube closure (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); glioblastoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955437 1584890 1592486 + 102024381 AGCD01034219;GBCB01001835;XM_005389461 XP_005389518 MODEL 10310687 ncrna LOC106149904 uncharacterized LOC106149904 NW_004955456 13978348 13997437 + 106149904 AGCD01046629;AGCD01046630;GBDJ01210651;XR_001236373;XR_001236374 MODEL 8955257 protein-coding Dolk dolichol kinase ENCODES a protein that exhibits dolichol kinase activity (ortholog); INVOLVED IN dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Im (ortholog); dilated cardiomyopathy (ortholog); hypertrophic cardiomyopathy 26 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleolus (ortholog) NW_004955570 1310894 1312952 - 102012699 AGCD01074808;GBDF01125287;XM_005413600 XP_005413657 MODEL 8735089 protein-coding LOC102013407 uncharacterized LOC102013407 NW_004955415 13302201 13314397 + 102013407 AGCD01016246;GBDF01006431;XM_005380747;XM_005380748;XM_005380749;XR_001233193;XR_001233194;XR_001233195;XR_001233196;XR_260288 XP_005380804;XP_005380805;XP_005380806 MODEL 8896317 protein-coding Efhc2 EF-hand domain containing 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH autistic disorder (ortholog); ornithine carbamoyltransferase deficiency (ortholog); X-Linked Intellectual Developmental Disorders (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); ciliary basal body (ortholog) NW_004955516 3867542 4036049 + 102005495 AGCD01067515;AGCD01067516;GBDF01195979;XM_005408997 XP_005409054 MODEL 9003733 pseudo LOC102003685 39S ribosomal protein L22, mitochondrial pseudogene NW_004955520 2732442 2737379 + 102003685 AGCD01068082 MODEL 8742537 protein-coding Il17c interleukin 17C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN neutrophil differentiation (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); FOUND IN extracellular space (ortholog) NW_004955541 2568941 2570440 + 102025843 AGCD01071416;XM_013507999 XP_013363453 MODEL 8967388 ncrna LOC102008015 uncharacterized LOC102008015 NW_004955506 4275716 4276076 - 102008015 AGCD01065332;XR_264349 MODEL 8701061 protein-coding LOC102011427 chromosome unknown open reading frame, human C19orf12 INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); mitochondrial calcium ion homeostasis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); dystonia (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); mitochondrial membrane (ortholog) NW_004955468 7903438 7914038 + 102011427 AGCD01052015;AGCD01052016;GBCB01022853;XM_005400110 XP_005400167 MODEL 8811681 protein-coding Angptl1 angiopoietin like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); FOUND IN extracellular space (ortholog) NW_004955406 18160164 18224822 - 102025319 AGCD01006023;AGCD01006024;GBDK01229909;XM_005374936;XM_005374937;XM_005374938;XM_013521102 XP_005374993;XP_005374994;XP_005374995;XP_013376556 MODEL 8765068 pseudo LOC102015639 protein arginine N-methyltransferase 3 pseudogene NW_004955487 2902814 2904330 - 102015639 AGCD01059272 MODEL 8924737 protein-coding Icoslg inducible T cell costimulator ligand ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN positive regulation of interleukin-4 production (ortholog); T follicular helper cell differentiation (ortholog); ASSOCIATED WITH celiac disease (ortholog); combined immunodeficiency (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955407 41190875 41197521 + 102022674 AGCD01007861;GBBH01118928;GBDF01041989;XM_013505381 XP_013360835 MODEL 9056604 protein-coding LOC102016392 zinc finger protein 699-like NW_004955495 356991 361711 + 102016392 AGCD01061625;GBCE01013017;GBDF01253415;XM_013505078 XP_013360532 MODEL 8772816 protein-coding Dgcr8 DGCR8 microprocessor complex subunit ENCODES a protein that exhibits double-stranded RNA binding (ortholog); heme binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of pre-miRNA processing (ortholog); primary miRNA processing (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH alcohol dependence (ortholog); autism spectrum disorder (ortholog); DiGeorge syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); microprocessor complex (ortholog) NW_004955442 17998565 18034247 - 102025296 AGCD01037991;AGCD01037992;AGCD01037993;AGCD01037994;GBCE01023470;XM_005391742;XM_013517769 XP_005391799;XP_013373223 MODEL 8738608 protein-coding LOC102020167 interferon-inducible GTPase 5 NW_004955555 1452146 1455263 + 102020167 AGCD01073082;XM_005412455 XP_005412512 MODEL 8931097 ncrna LOC102009527 uncharacterized LOC102009527 NW_004955429 19955225 19971743 - 102009527 AGCD01028974;AGCD01028975;XR_001234478;XR_261368 MODEL 8964919 ncrna LOC102013774 uncharacterized LOC102013774 NW_004955447 17694436 17697503 - 102013774 AGCD01041133;GBCB01129695;XR_001235726 MODEL 9015847 pseudo LOC102020908 proteasome subunit beta type-5 pseudogene NW_004955475 1656818 1658188 - 102020908 AGCD01054757 MODEL 8939448 ncrna LOC102008377 uncharacterized LOC102008377 NW_004955406 39188080 39231357 + 102008377 AGCD01006621;AGCD01006622;AGCD01006623;GBBH01127399;XR_001236960;XR_001236961;XR_001236965;XR_259524 MODEL 8889380 protein-coding Eprs1 glutamyl-prolyl-tRNA synthetase 1 ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to type II interferon (ortholog); glutamyl-tRNA aminoacylation (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 15 (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955520 3550558 3606015 + 102025157 AGCD01068105;AGCD01068106;GBDF01046961;XM_005409277 XP_005409334 MODEL 39133397 misc_rna 7SK 7SK RNA 39131995 rrna 5S_rRNA 5S ribosomal RNA 9037051 pseudo LOC102015234 myosin light chain 6B pseudogene NW_004955434 16032905 16034308 - 102015234 AGCD01032509 MODEL 8957090 ncrna LOC102005498 uncharacterized LOC102005498 NW_004955522 4121118 4127681 - 102005498 AGCD01068413;GBDF01226154;XR_001231895;XR_264630 MODEL 8773914 protein-coding LOC102010275 fer-1-like protein 4 NW_004955422 25848531 25882747 + 102010275 AGCD01023269;GBCQ01116103;XM_013514202 XP_013369656 MODEL 39132235 rrna 5S_rRNA 5S ribosomal RNA 8700011 protein-coding Dctn3 dynactin subunit 3 INVOLVED IN cytoskeleton-dependent cytokinesis (ortholog); microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog); cytosol (ortholog); dynactin complex (ortholog) NW_004955472 1511984 1521148 + 102022382 AGCD01053397;AGCD01053398;GBDI01005417;XM_005401050;XM_005401053 XP_005401107;XP_005401110 MODEL 8906506 protein-coding Fbxl5 F-box and leucine rich repeat protein 5 ENCODES a protein that exhibits iron ion binding (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); positive regulation of protein catabolic process (ortholog); PARTICIPATES IN iron homeostasis pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955480 8360957 8397903 + 102016266 AGCD01056720;AGCD01056721;GBCB01022848;GBDF01006353;XM_013503309 XP_013358763 MODEL 9010354 protein-coding Cxcl14 C-X-C motif chemokine ligand 14 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); inner ear development (ortholog); negative regulation of myoblast differentiation (ortholog); ASSOCIATED WITH asthma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); contact dermatitis (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955408 30733079 30740854 - 102009914 AGCD01008815;GBCE01002150;XM_005376477 XP_005376534 MODEL 8730436 ncrna LOC102024372 uncharacterized LOC102024372 NW_004955433 3738370 3744365 + 102024372 AGCD01031433;GBDF01008075;XR_001234706;XR_001234707 MODEL 8753696 protein-coding Abhd10 abhydrolase domain containing 10, depalmitoylase ENCODES a protein that exhibits hydrolase activity, hydrolyzing O-glycosyl compounds (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN protein depalmitoylation (ortholog); xenobiotic metabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955427 12388945 12403703 + 102023721 AGCD01027212;AGCD01027213;GBDK01016264;XM_005386378;XM_013515213 XP_005386435;XP_013370667 MODEL 8708720 pseudo LOC102021634 granzyme B(G,H)-like NW_004955409 35533853 35535909 + 102021634 AGCD01010425 MODEL 8926406 protein-coding LOC102020501 olfactory receptor 12-like NW_004955581 974973 975902 + 102020501 AGCD01075705;XM_005414256 XP_005414313 MODEL 8938738 protein-coding LOC102008016 scavenger receptor cysteine-rich type 1 protein M130-like NW_004955507 6508836 6526813 - 102008016 AGCD01065720;AGCD01065721;AGCD01065722;GBDI01367183;XM_013506149 XP_013361603 MODEL 8909645 protein-coding LOC102011869 butyrophilin subfamily 1 member A1-like NW_004955483 371694 378761 - 102011869 AGCD01057606;AGCD01057607;XM_013503804 XP_013359258 MODEL 8745555 protein-coding Hpse2 heparanase 2 (inactive) ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); heparanase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH CAKUT (ortholog); genetic disease (ortholog); urofacial syndrome (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955507 4442677 5205976 - 102014072 AGCD01065648;AGCD01065649;AGCD01065650;AGCD01065651;AGCD01065652;AGCD01065653;AGCD01065654;AGCD01065655;AGCD01065656;AGCD01065657;AGCD01065658;AGCD01065659;AGCD01065660;AGCD01065661;AGCD01065662;AGCD01065663;AGCD01065664;AGCD01065665;AGCD01065666;AGCD01065667;GBDK01049880;XM_005407665 XP_005407722 MODEL 8763412 protein-coding COX2 cytochrome c oxidase subunit II MT 7018 7701 + 15822227 JX312692 AFQ55780;YP_008080748 REVIEWED 8971889 protein-coding Cul3 cullin 3 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); Notch binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; Wnt signaling, canonical pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant pseudohypoaldosteronism type 1 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN centrosome (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955453 9546554 9629976 + 102018560 AGCD01044772;AGCD01044773;AGCD01044774;GBBH01114512;GBCB01007204;XM_013519956 XP_013375410 MODEL 8937217 protein-coding Kcnb2 potassium voltage-gated channel subfamily B member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); protein heterodimerization activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); colorectal cancer (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); neuronal cell body membrane (ortholog) NW_004955444 7237011 7646399 - 102026681 AGCD01038903;AGCD01038904;AGCD01038905;AGCD01038906;AGCD01038907;AGCD01038908;AGCD01038909;AGCD01038910;AGCD01038911;AGCD01038912;AGCD01038913;AGCD01038914;AGCD01038915;XM_005392097 XP_005392154 MODEL 8715561 ncrna LOC102014142 uncharacterized LOC102014142 NW_004955422 14683499 14685264 + 102014142 AGCD01022863;GBDF01252177;XR_001233942 MODEL 8761309 protein-coding LOC102009124 uncharacterized LOC102009124 NW_004955447 15117933 15159860 - 102009124 AGCD01041033;AGCD01041034;AGCD01041035;AGCD01041036;AGCD01041037;GBDF01196985;XM_013518482 XP_013373936 MODEL 8810400 ncrna LOC102007602 uncharacterized LOC102007602 NW_004955443 8592132 8720400 + 102007602 AGCD01038329;AGCD01038330;AGCD01038331;AGCD01038332;AGCD01038333;AGCD01038334;GBDI01032702;XR_262196;XR_262197 MODEL 8976194 pseudo LOC102014540 E3 ubiquitin-protein ligase TRIM37 pseudogene NW_004955410 4580151 4601435 + 102014540 AGCD01010667 MODEL 8724068 protein-coding Crybb1 crystallin beta B1 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 17 multiple types (ortholog) NW_004955455 1165048 1180826 - 102018059 AGCD01045570;GBBH01043266;XM_005396158 XP_005396215 MODEL 8794548 protein-coding Itgb3bp integrin subunit beta 3 binding protein INVOLVED IN negative regulation of epithelial cell apoptotic process (ortholog); positive regulation of epithelial cell proliferation (ortholog); ASSOCIATED WITH endometriosis (ortholog); intellectual disability (ortholog); FOUND IN kinetochore (ortholog); nucleoplasm (ortholog) NW_004955423 26510979 26568796 + 102004178 AGCD01024097;GBDF01084975;XM_005385326;XM_013514391;XM_013514392;XM_013514393;XM_013514394 XP_005385383;XP_013369845;XP_013369846;XP_013369847;XP_013369848 MODEL 8940114 protein-coding LOC102008777 atherin-like NW_004955558 851314 852320 + 102008777 AGCD01073394;GBCE01172818;GBDF01225096;XM_013508881 XP_013364335 MODEL 39134127 misc_rna 7SK 7SK RNA 8812077 protein-coding Chst10 carbohydrate sulfotransferase 10 ENCODES a protein that exhibits HNK-1 sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); learning (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955470 6448167 6468386 - 102014550 AGCD01052771;GBBH01207463;XM_005400754;XM_013522834 XP_005400811;XP_013378288 MODEL 8844512 protein-coding Brd3 bromodomain containing 3 ENCODES a protein that exhibits histone H3K18cr reader activity (ortholog); histone H3K27cr reader activity (ortholog); histone H3K9cr reader activity (ortholog); INVOLVED IN endodermal cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH medulloblastoma (ortholog); primary ovarian insufficiency (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955513 3145267 3164791 - 102023386 AGCD01066895;AGCD01066896;GBDK01134998;XM_013506673;XM_013506674;XM_013506675;XM_013506676 XP_013362127;XP_013362128;XP_013362129;XP_013362130 MODEL 8895764 protein-coding LOC102016025 chromosome unknown open reading frame, human C5orf58 NW_004955408 23186712 23197682 + 102016025 AGCD01008584;GBBH01090853;XM_013507057;XM_013507065;XM_013507066;XM_013507072;XM_013507076;XM_013507077;XM_013507079 XP_013362511;XP_013362519;XP_013362520;XP_013362526;XP_013362530;XP_013362531;XP_013362533 MODEL 8989040 protein-coding Efhd1 EF-hand domain family member D1 ENCODES a protein that exhibits calcium ion sensor activity (ortholog); INVOLVED IN neuron projection development (ortholog); regulation of cellular hyperosmotic salinity response (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Salivary Gland Neoplasms (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN Golgi apparatus (ortholog); mitochondrial inner membrane (ortholog) NW_004955453 3344919 3378157 - 102004779 AGCD01044657;GBCQ01011819;XM_013519767;XM_013519768 XP_013375221;XP_013375222 MODEL 9045371 protein-coding Emc6 ER membrane protein complex subunit 6 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955467 13144659 13146434 - 102020231 AGCD01051667;GBBH01164107;XM_005399715 XP_005399772 MODEL 8795536 protein-coding LOC102011029 chromosome unknown open reading frame, human C10orf67 ASSOCIATED WITH pancreatic agenesis 2 (ortholog) NW_004955429 5674076 5798289 + 102011029 AGCD01028531;AGCD01028532;AGCD01028533;AGCD01028534;AGCD01028535;AGCD01028536;GBDF01127753;XM_013515364 XP_013370818 MODEL 9014717 protein-coding Dctn4 dynactin subunit 4 INVOLVED IN microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cystic fibrosis (ortholog); Pseudomonas Infections (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); focal adhesion (ortholog) NW_004955415 3850475 3886953 + 102012531 AGCD01015956;AGCD01015957;AGCD01015958;GBDK01283632;XM_005380566;XM_013512222 XP_005380623;XP_013367676 MODEL 8934237 protein-coding LOC102019103 uncharacterized LOC102019103 NW_004955528 1074125 1078875 - 102019103 AGCD01069550;GBDF01306990;XM_005409996;XR_001231983 XP_005410053 MODEL 39134435 misc_rna 7SK 7SK RNA 8739935 protein-coding Angptl2 angiopoietin like 2 ASSOCIATED WITH dermatomyositis (ortholog) NW_004955419 1417773 1450199 + 102006664 AGCD01019648;GBDJ01024830;XM_005382438 XP_005382495 MODEL 9004106 ncrna LOC102020909 uncharacterized LOC102020909 NW_004955477 8629295 8651210 - 102020909 AGCD01055648;GBDF01115855;XR_263663 MODEL 10178266 ncrna LOC106149905 uncharacterized LOC106149905 NW_004955457 7725658 7747335 - 106149905 AGCD01046885;AGCD01046886;GBDK01094097;XR_001236376 MODEL 8798750 ncrna LOC102017548 uncharacterized LOC102017548 NW_004955409 22184677 22188277 - 102017548 AGCD01010027;AGCD01010028;AGCD01010029;GBDF01068620;XR_259786 MODEL 8802129 pseudo LOC102012667 translationally-controlled tumor protein pseudogene NW_004955502 3634252 3634801 + 102012667 AGCD01064317 MODEL 8917460 pseudo LOC102013409 tubulin beta-4B chain pseudogene NW_004955415 32953159 32960953 + 102013409 AGCD01016743;AGCD01016744 MODEL 39132237 rrna 5S_rRNA 5S ribosomal RNA 9048358 protein-coding LOC102003687 vomeronasal type-2 receptor 116-like NW_004955524 1903056 1933183 + 102003687 AGCD01068783;AGCD01068784;AGCD01068785;AGCD01068786;AGCD01068787;GBDF01097477;XM_013507191 XP_013362645 MODEL 8952034 protein-coding Gpr50 G protein-coupled receptor 50 ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955498 6707630 6711854 + 102005276 AGCD01063132;AGCD01063133;XM_005406431 XP_005406488 MODEL 10287539 protein-coding Il17d interleukin 17D ENCODES a protein that exhibits cytokine activity (ortholog); protein homodimerization activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN inflammatory response (ortholog); negative regulation of hemopoiesis (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Chronic Hepatitis C (ortholog); Cytomegalovirus Infections (ortholog); hidradenitis suppurativa (ortholog); FOUND IN extracellular space (ortholog) NW_004955497 1499700 1506557 + 106146836 AGCD01062463;AGCD01062464;GBDF01304881;XM_013505463 XP_013360917 MODEL 8841814 protein-coding Eps15 epidermal growth factor receptor pathway substrate 15 ENCODES a protein that exhibits identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); endocytic recycling (ortholog); Golgi to endosome transport (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; Notch signaling pathway; FOUND IN aggresome (ortholog); AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog) NW_004955464 7569570 7688098 + 102025773 AGCD01050065;AGCD01050066;AGCD01050067;GBCB01020993;XM_005398604;XM_013521700;XM_013521701;XM_013521702 XP_005398661;XP_013377154;XP_013377155;XP_013377156 MODEL 8828161 pseudo LOC102013029 cyclic AMP-dependent transcription factor ATF-4 pseudogene NW_004955402 34589714 34591735 + 102013029 AGCD01000866 MODEL 8794313 ncrna LOC102021635 uncharacterized LOC102021635 NW_004955462 9120697 9137546 + 102021635 AGCD01049332;GBDF01013525;XR_263109 MODEL 8919194 protein-coding Abhd11 abhydrolase domain containing 11 ENCODES a protein that exhibits lipase activity (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) NW_004955456 14019073 14021536 + 102023004 AGCD01046631;GBDK01009837;XM_005396765 XP_005396822 MODEL 8834478 protein-coding LOC102009529 olfactory receptor 5A2-like NW_004955511 3917910 3918862 - 102009529 AGCD01066481;XM_013506389 XP_013361843 MODEL 8805816 ncrna LOC102013777 uncharacterized LOC102013777 NW_004955448 18100507 18140731 - 102013777 AGCD01041736;AGCD01041737;AGCD01041738;AGCD01041739;AGCD01041740;GBDF01054183;XR_001235765 MODEL 8732351 protein-coding Id1 inhibitor of DNA binding 1, HLH protein ENCODES a protein that exhibits identical protein binding (ortholog); proteasome binding (ortholog); transcription factor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell-abiotic substrate adhesion (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; ASSOCIATED WITH cholestasis (ortholog); disease of cellular proliferation (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955422 29337969 29339178 - 102019405 AGCD01023390;GBCE01002189;XM_005384905 XP_005384962 MODEL 39133421 misc_rna 7SK 7SK RNA 39131996 rrna 5S_rRNA 5S ribosomal RNA 8924618 protein-coding Dolpp1 dolichyldiphosphatase 1 ENCODES a protein that exhibits dolichyldiphosphatase activity (ortholog); INVOLVED IN protein N-linked glycosylation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955570 1407700 1415813 + 102015254 AGCD01074813;GBCE01176233;XM_005413609;XM_013509424 XP_005413666;XP_013364878 MODEL 8714964 protein-coding Dgka diacylglycerol kinase alpha ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955458 3517519 3544651 + 102024532 AGCD01047314;AGCD01047315;AGCD01047316;AGCD01047317;GBCE01166881;XM_005397269;XM_013520902;XM_013520903;XM_013520904;XM_013520905 XP_005397326;XP_013376356;XP_013376357;XP_013376358;XP_013376359 MODEL 8940864 ncrna LOC102015235 uncharacterized LOC102015235 NW_004955435 10300244 10325935 - 102015235 AGCD01033084;GBDI01112304;XR_001234839;XR_261677 MODEL 8854849 protein-coding Hpx hemopexin INVOLVED IN heme metabolic process (ortholog); hemoglobin metabolic process (ortholog); positive regulation of humoral immune response mediated by circulating immunoglobulin (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); autoimmune disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN extracellular space (ortholog) NW_004955414 22158654 22169133 - 102021432 AGCD01015444;AGCD01015445;GBBH01033139;XM_005380141;XM_013511830 XP_005380198;XP_013367284 MODEL 8736531 pseudo LOC102014542 multifunctional protein ADE2 pseudogene NW_004955411 9163025 9174530 + 102014542 AGCD01011747 MODEL 8776291 protein-coding Crybb3 crystallin beta B3 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 22 multiple types (ortholog); genetic disease (ortholog) NW_004955455 45499 50694 - 102009686 AGCD01045552;GBDF01078219;XM_013520402 XP_013375856 MODEL 8796304 pseudo LOC102016394 YEATS domain-containing protein 4 pseudogene NW_004955423 524127 524634 - 102016394 AGCD01023414;XM_005385348 MODEL 8755903 protein-coding Fbxl6 F-box and leucine rich repeat protein 6 NW_004955454 2976812 2979835 - 102028265 AGCD01045044;GBCQ01065686;XM_005395865;XM_013520099;XM_013520100;XM_013520101 XP_005395922;XP_013375553;XP_013375554;XP_013375555 MODEL 8840842 protein-coding LOC102015640 ubiquitin carboxyl-terminal hydrolase 17-like protein 6 NW_004955487 109914 111590 - 102015640 AGCD01059207;XM_005404451 XP_005404508 MODEL 9017643 protein-coding Chst11 carbohydrate sulfotransferase 11 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); dermatan 4-sulfotransferase activity (ortholog); N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity (ortholog); INVOLVED IN cartilage development (ortholog); chondrocyte development (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); OSTEOCHONDRODYSPLASIA, BRACHYDACTYLY, AND OVERLAPPING MALFORMED DIGITS (ortholog); Synpolydactyly 1 (ortholog) NW_004955405 38985046 39134130 + 102012275 AGCD01005494;AGCD01005495;AGCD01005496;GBCE01072737;GBDI01161466;XM_005374594;XM_005374595 XP_005374651;XP_005374652 MODEL 8986326 pseudo LOC102016027 olfactory receptor 10C1-like NW_004955458 2404491 2405434 - 102016027 AGCD01047232 MODEL 8800042 protein-coding LOC102020170 olfactory receptor 5-like NW_004955567 184657 185601 + 102020170 AGCD01074385;XM_005413399 XP_005413456 MODEL 8789331 protein-coding Efhd2 EF-hand domain family member D2 ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); calcium ion sensor activity (ortholog); INVOLVED IN actin crosslink formation (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); FOUND IN lamellipodium (ortholog) NW_004955527 2724607 2739324 - 102013754 AGCD01069464;GBBH01060768;XM_005409875 XP_005409932 MODEL 8840265 protein-coding Emc7 ER membrane protein complex subunit 7 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955416 459668 482562 + 102022189 AGCD01016802;AGCD01016803;AGCD01016804;GBDF01007726;XM_005381163 XP_005381220 MODEL 8781223 ncrna LOC102007605 uncharacterized LOC102007605 NW_004955447 15774756 15787240 - 102007605 AGCD01041068;AGCD01041069;GBDF01126660;XR_001235716;XR_001235717 MODEL 8730876 protein-coding Cul4a cullin 4A ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955404 583261 617914 - 102014001 AGCD01003203;AGCD01003204;GBDK01143401;XM_013515570 XP_013371024 MODEL 9053423 protein-coding LOC102008017 olfactory receptor 5M3-like NW_004955511 1648423 1649355 - 102008017 AGCD01066377;XM_005407969 XP_005408026 MODEL 8792308 pseudo LOC102005500 sorting nexin-2 pseudogene NW_004955434 22965591 22967140 - 102005500 AGCD01032690 MODEL 8970058 protein-coding LOC102008379 zinc finger protein 454 NW_004955408 1440967 1461815 - 102008379 AGCD01007959;GBBH01113383;XM_013507982;XM_013507985 XP_013363436;XP_013363439 MODEL 8920840 protein-coding LOC102009127 extracellular matrix protein 2 NW_004955580 238638 245468 + 102009127 AGCD01075592;AGCD01075593;GBDI01378283;XM_005414221 XP_005414278 MODEL 9032997 protein-coding Angptl3 angiopoietin like 3 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); growth factor activity (ortholog); integrin binding (ortholog); INVOLVED IN acylglycerol homeostasis (ortholog); artery morphogenesis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN lipid metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); familial hypobetalipoproteinemia 2 (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular space (ortholog) NW_004955423 27113378 27121339 - 102010380 AGCD01024115;GBCQ01000094;XM_005385334 XP_005385391 MODEL 39133426 misc_rna 7SK 7SK RNA 8967454 ncrna LOC102011431 uncharacterized LOC102011431 NW_004955414 6656760 6678985 + 102011431 AGCD01014926;GBBH01097014;XR_001233094;XR_001233095;XR_001233097;XR_260157 MODEL 39134128 misc_rna 7SK 7SK RNA 151707871 protein-coding BRD3OS BRD3 opposite strand 8967409 protein-coding Cxcl16 C-X-C motif chemokine ligand 16 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); positive regulation of cell growth (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); systemic scleroderma (ortholog); FOUND IN extracellular space (ortholog); membrane (ortholog) NW_004955467 10132461 10136649 - 102010242 AGCD01051546;GBBH01064209;XM_013522132 XP_013377586 MODEL 39132238 rrna 5S_rRNA 5S ribosomal RNA 8827225 pseudo LOC102011874 cytochrome c-type heme lyase pseudogene NW_004955489 679288 680097 - 102011874 AGCD01059812 MODEL 8792461 protein-coding LOC102014144 putative vomeronasal receptor-like protein 4 NW_004955494 8313356 8317792 + 102014144 AGCD01061582;XM_005405546 XP_005405603 MODEL 39134436 misc_rna 7SK 7SK RNA 8798962 protein-coding COX3 cytochrome c oxidase subunit III MT 8612 9395 + 15822208 JX312692 AFQ55783;YP_008080751 REVIEWED 8815042 protein-coding LOC102010276 uncharacterized LOC102010276 NW_004955494 4605410 4658564 - 102010276 AGCD01061508;AGCD01061509;XM_013504923 XP_013360377 MODEL 8855658 ncrna LOC102019105 uncharacterized LOC102019105 NW_004955436 21653886 21682147 + 102019105 AGCD01034066;AGCD01034067;AGCD01034068;GBDF01020993;XR_001234982;XR_001234983;XR_001234984 MODEL 8952193 protein-coding Kcnc1 potassium voltage-gated channel subfamily C member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); kinesin binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); cerebellum development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN axolemma (ortholog); calyx of Held (ortholog); cell surface (ortholog) NW_004955414 32538968 32580370 + 102013926 AGCD01015782;GBCB01098052;XM_005380395 XP_005380452 MODEL 8769971 protein-coding Dctn5 dynactin subunit 5 INVOLVED IN aorta development (ortholog); coronary vasculature development (ortholog); microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog) NW_004955493 2175585 2204742 + 102023486 AGCD01060932;AGCD01060933;AGCD01060934;AGCD01060935;GBDF01123485;XM_005405104;XR_264075 XP_005405161 MODEL 8979789 pseudo LOC102009531 eukaryotic translation initiation factor 4B pseudogene NW_004955512 1013969 1019267 + 102009531 AGCD01066629;XR_264452 MODEL 8988348 protein-coding Abhd12 abhydrolase domain containing 12, lysophospholipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); adult walking behavior (ortholog); glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH cone dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cytoplasm (ortholog); dendrite cytoplasm (ortholog) NW_004955415 31284947 31337703 - 102011199 AGCD01016672;AGCD01016673;AGCD01016674;GBDF01082244;GBDK01081859;XM_013512239 XP_013367693 MODEL 8721413 ncrna LOC102020910 uncharacterized LOC102020910 NW_004955416 21877127 21881463 - 102020910 AGCD01017517;AGCD01017518;GBDF01253505;XR_260409 MODEL 8946993 pseudo LOC102012669 protein slowmo homolog 2-like NW_004955503 6860185 6860772 + 102012669 AGCD01064772 MODEL 8929936 protein-coding LOC102008778 olfactory receptor 1361-like NW_004955442 14157622 14158563 - 102008778 AGCD01037803;XM_005391854 XP_005391911 MODEL 8738992 pseudo LOC102015244 Golgi apparatus membrane protein TVP23 homolog B pseudogene NW_004955439 12044830 12045421 + 102015244 AGCD01035932 MODEL 8909994 protein-coding LOC102024378 DNA helicase MCM9-like NW_004955436 1593994 1628221 - 102024378 AGCD01033582;GBBH01209119;GBBH01209120;XM_013516639 XP_013372093 MODEL 8867797 protein-coding LOC102003691 vomeronasal type-2 receptor 116-like NW_004955532 145761 208308 + 102003691 AGCD01070101;AGCD01070102;AGCD01070103;AGCD01070104;AGCD01070105;AGCD01070106;AGCD01070107;AGCD01070108;AGCD01070109;AGCD01070110;XM_013507569 XP_013363023 MODEL 9026239 pseudo LOC102020502 cell cycle control protein 50A pseudogene NW_004955402 7959763 7962271 - 102020502 AGCD01000188;XM_005372665;XM_005372666 MODEL 8913825 protein-coding Cul4b cullin 4B ENCODES a protein that exhibits damaged DNA binding (ortholog); ubiquitin ligase complex scaffold activity (ortholog); INVOLVED IN astrocyte differentiation (ortholog); gene expression (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) NW_004955572 1308491 1365147 + 102003816 AGCD01074949;GBDF01160515;XM_005413656;XM_005413657;XM_005413658;XM_005413659;XM_013509444 XP_005413713;XP_005413714;XP_005413715;XP_005413716;XP_013364898 MODEL 8798348 protein-coding LOC102009128 zinc finger protein 304 NW_004955584 189872 203610 + 102009128 AGCD01075926;GBDF01154035;XM_005414360 XP_005414417 MODEL 8903025 protein-coding Dgkb diacylglycerol kinase beta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN cytosol (ortholog); extrinsic component of postsynaptic density membrane (ortholog); glutamatergic synapse (ortholog) NW_004955410 17677375 18304409 - 102019368 AGCD01010991;AGCD01010992;AGCD01010993;AGCD01010994;AGCD01010995;AGCD01010996;AGCD01010997;AGCD01010998;AGCD01010999;AGCD01011000;AGCD01011001;AGCD01011002;GBDJ01401747;XM_005377328;XM_013510618;XM_013510619;XM_013510620;XM_013510621;XM_013510623;XM_013510624 XP_005377385;XP_013366072;XP_013366073;XP_013366074;XP_013366075;XP_013366077;XP_013366078 MODEL 8959319 protein-coding Il17f interleukin 17F ENCODES a protein that exhibits cytokine activity (ortholog); cytokine binding (ortholog); cytokine receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic asthma (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular space (ortholog) NW_004955411 5852767 5859208 + 102013268 AGCD01011664;XM_013510734 XP_013366188 MODEL 8748923 protein-coding Itgb4 integrin subunit beta 4 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); insulin-like growth factor I binding (ortholog); neuregulin binding (ortholog); INVOLVED IN autophagy (ortholog); cell adhesion (ortholog); cell motility (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Congenital Myopathy with Neuropathy and Deafness (ortholog); ectodermal dysplasia (ortholog); FOUND IN basal plasma membrane (ortholog); basement membrane (ortholog); cell cortex (ortholog) NW_004955506 6493466 6526778 - 102013633 AGCD01065428;AGCD01065429;GBCE01029062;GBDJ01006555;XM_005407483;XM_005407484;XM_005407485;XM_005407486 XP_005407540;XP_005407541;XP_005407542;XP_005407543 MODEL 9022800 protein-coding LOC102011031 odorant-binding protein 2b-like NW_004955513 2641785 2645058 + 102011031 AGCD01066883;GBBH01003721;XM_005408423;XM_013506570 XP_005408480;XP_013362024 MODEL 9002165 protein-coding Crybg1 crystallin beta-gamma domain containing 1 ASSOCIATED WITH Disease Progression (ortholog); melanoma (ortholog) NW_004955411 31781954 31898017 + 102006436 AGCD01012287;AGCD01012288;AGCD01012289;GBDF01014569;XM_005377829;XM_013510790 XP_005377886;XP_013366244 MODEL 9039203 ncrna LOC102020173 uncharacterized LOC102020173 NW_004955448 665787 671113 + 102020173 AGCD01041236;GBDF01074704;XR_262451 MODEL 8703493 protein-coding Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 INVOLVED IN synaptic vesicle endocytosis (ortholog); FOUND IN clathrin coat of coated pit (ortholog); presynapse (ortholog) NW_004955524 1264035 1309394 + 102029784 AGCD01068741;AGCD01068742;GBCE01030448;XM_013507228;XM_013507229;XM_013507230;XM_013507231 XP_013362682;XP_013362683;XP_013362684;XP_013362685 MODEL 8935311 ncrna LOC102013779 uncharacterized LOC102013779 NW_004955450 1093815 1102231 - 102013779 AGCD01042350;GBBH01079757;XR_262514 MODEL 8943650 protein-coding LOC102008019 olfactory receptor 10AG1-like NW_004955511 736042 745089 + 102008019 AGCD01066342;XM_005408210 XP_005408267 MODEL 10134922 pseudo LOC106149906 tetratricopeptide repeat protein 19, mitochondrial-like NW_004955457 12061294 12065929 + 106149906 AGCD01046998 MODEL 8813441 ncrna LOC102008387 uncharacterized LOC102008387 NW_004955410 24882847 24896816 + 102008387 AGCD01011136;GBDK01431851;XR_001232709 MODEL 8911435 protein-coding Crybg2 crystallin beta-gamma domain containing 2 ASSOCIATED WITH COVID-19 (ortholog) NW_004955452 5720756 5747259 - 102016878 AGCD01044052;GBBH01135316;XM_005394854;XM_005394855;XM_005394856;XM_013519623;XM_013519624 XP_005394911;XP_005394912;XP_005394913;XP_013375077;XP_013375078 MODEL 8872093 protein-coding Id2 inhibitor of DNA binding 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adult locomotory behavior (ortholog); bundle of His development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955487 878326 880783 - 102009189 AGCD01059234;GBDJ01312094;XM_005404347;XM_005404348 XP_005404404;XP_005404405 MODEL 8805826 protein-coding Gpr52 G protein-coupled receptor 52 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN locomotory behavior (ortholog); response to xenobiotic stimulus (ortholog) NW_004955406 14415252 14420251 + 102014008 AGCD01005964;GBDF01025623;XM_005374893;XM_005374894;XM_005374895;XM_013520909 XP_005374950;XP_005374951;XP_005374952;XP_013376363 MODEL 39134129 misc_rna 7SK 7SK RNA 8922303 protein-coding LOC102016398 melanoma-associated antigen 11-like NW_004955498 1977844 1978581 - 102016398 AGCD01062758;XM_013505522 XP_013360976 MODEL 8830561 protein-coding Brd4 bromodomain containing 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); chromatin remodeling (ortholog); chromosome segregation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); autosomal dominant polycystic kidney disease (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955495 7959033 7989216 + 102009518 AGCD01062173;GBDF01154291;XM_013505125 XP_013360579 MODEL 8758332 pseudo LOC102015642 60S ribosomal protein L31 pseudogene NW_004955493 5270440 5279258 - 102015642 AGCD01061061 MODEL 8844587 protein-coding LOC102003692 cytoplasmic FMR1-interacting protein 1 NW_004955533 1057633 1203027 + 102003692 AGCD01070337;AGCD01070338;AGCD01070339;AGCD01070340;AGCD01070341;AGCD01070342;AGCD01070343;AGCD01070344;AGCD01070345;AGCD01070346;AGCD01070347;AGCD01070348;GBBH01063748;GBDF01122441;XM_013507676 XP_013363130 MODEL 8942190 protein-coding LOC102007606 prolactin-like NW_004955576 1119907 1125387 + 102007606 AGCD01075360;GBCQ01002340;XM_005413941 XP_005413998 MODEL 8803637 protein-coding LOC102016028 phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like NW_004955409 22116214 22117258 - 102016028 AGCD01010017;GBDF01002616;XM_005376887 XP_005376944 MODEL 8833168 protein-coding Chst12 carbohydrate sulfotransferase 12 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hypertension (ortholog) NW_004955460 12847440 12875614 - 102015084 AGCD01048664;GBDJ01197236;XM_005397875;XM_005397876;XM_013521288 XP_005397932;XP_005397933;XP_013376742 MODEL 8716381 protein-coding Emc8 ER membrane protein complex subunit 8 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog); endoplasmic reticulum (ortholog) NW_004955541 873354 884247 - 102020052 AGCD01071363;GBDI01066673;GBDJ01075485;XM_005410981;XM_013507992 XP_005411038;XP_013363446 MODEL 8898049 protein-coding Fbxl7 F-box and leucine rich repeat protein 7 INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); mitotic cell cycle (ortholog); protein polyubiquitination (ortholog); FOUND IN centrosome (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955426 4659787 5044074 + 102010181 AGCD01026106;AGCD01026107;AGCD01026108;AGCD01026109;AGCD01026110;AGCD01026111;GBDF01113132;GBDI01354947;XM_005386127 XP_005386184 MODEL 9063251 pseudo LOC102019109 mortality factor 4-like protein 1 pseudogene NW_004955439 2501307 2503035 - 102019109 AGCD01035651 MODEL 8859452 pseudo LOC102013413 peptidyl-prolyl cis-trans isomerase-like 4 pseudogene NW_004955417 10686148 10688391 + 102013413 AGCD01018086 MODEL 9049281 protein-coding Donson DNA replication fork stabilization factor DONSON INVOLVED IN CMG complex assembly (ortholog); DNA damage checkpoint signaling (ortholog); DNA replication (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog); replication fork (ortholog); replisome (ortholog) NW_004955407 33007257 33014600 - 102016563 AGCD01007693;GBCE01016663;GBDF01002000;XM_013504316 XP_013359770 MODEL 8902898 pseudo LOC102013034 mitochondrial inner membrane protease ATP23 homolog NW_004955402 57646854 57653921 + 102013034 AGCD01001505 MODEL 8795283 protein-coding Hr HR lysine demethylase and nuclear receptor corepressor ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); nuclear vitamin D receptor binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH alopecia (ortholog); alopecia universalis (ortholog); atrichia with papular lesions (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955403 45605870 45624386 - 102003402 AGCD01002824;GBDJ01313713;XM_005373647;XM_013513748;XM_013513749;XM_013513757;XR_001233863 XP_005373704;XP_013369202;XP_013369203;XP_013369211 MODEL 9060807 pseudo LOC102012670 coiled-coil domain-containing protein 112 pseudogene NW_004955427 341416 343438 - 102012670 AGCD01026827;AGCD01026828 MODEL 39133427 misc_rna 7SK 7SK RNA 8837092 ncrna LOC102021638 uncharacterized LOC102021638 NW_004955411 24539744 24554375 - 102021638 AGCD01012127;GBDF01145167;XR_259941 MODEL 8948775 protein-coding LOC102014543 uncharacterized LOC102014543 NW_004955465 13812045 13816867 - 102014543 AGCD01050625;GBCE01103803;XM_013521793 XP_013377247 MODEL 39132239 rrna 5S_rRNA 5S ribosomal RNA 9063855 protein-coding Angptl4 angiopoietin like 4 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); PARTICIPATES IN lipid metabolic pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); carcinoma (ortholog); coronary artery disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955563 1024163 1030816 - 102013662 AGCD01074105;AGCD01074106;AGCD01074107;GBBH01155465;GBDI01168623;XM_013509151 XP_013364605 MODEL 8945473 protein-coding Il17ra interleukin 17 receptor A ENCODES a protein that exhibits interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); defense response to fungus (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH brain ischemia (ortholog); chronic mucocutaneous candidiasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955454 5230384 5252769 + 102028716 AGCD01045136;GBBH01142826;GBDK01129636;XM_005395965;XM_013520213;XM_013520214;XM_013520215 XP_005396022;XP_013375667;XP_013375668;XP_013375669 MODEL 8892192 pseudo LOC102011032 aurora kinase A pseudogene NW_004955431 1227505 1229111 - 102011032 AGCD01029892 MODEL 8914173 ncrna LOC102014146 uncharacterized LOC102014146 NW_004955423 23506950 23576432 - 102014146 AGCD01024005;AGCD01024006;AGCD01024007;AGCD01024008;AGCD01024009;GBBH01072420;XR_001234109;XR_001234110;XR_001234111;XR_001234112;XR_001234113;XR_001234114;XR_260988 MODEL 39131997 rrna 5S_rRNA 5S ribosomal RNA 8967462 protein-coding LOC102011879 spermatogenesis-associated protein 31E1-like NW_004955422 23602412 23608132 + 102011879 AGCD01023197;GBDK01288025;XM_005384703 XP_005384760 MODEL 8774529 protein-coding Crybg3 crystallin beta-gamma domain containing 3 ENCODES a protein that exhibits protein kinase A binding (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955407 203315 329017 - 102010769 AGCD01006733;AGCD01006734;AGCD01006735;AGCD01006736;GBDF01052893;XM_005375490;XM_013503474 XP_005375547;XP_013358928 MODEL 9013517 protein-coding Cxcl17 C-X-C motif chemokine ligand 17 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); INVOLVED IN cell migration (ortholog); chemokine-mediated signaling pathway (ortholog); leukocyte chemotaxis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular space (ortholog) NW_004955555 495437 509788 + 102020166 AGCD01073034;AGCD01073035;GBBH01002398;XM_005412354 XP_005412411 MODEL 8968687 protein-coding Dgkd diacylglycerol kinase delta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN diacylglycerol catabolic process (ortholog); diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Lennox-Gastaut syndrome (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN clathrin-coated pit (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955453 2740922 2802669 - 102007619 AGCD01044636;AGCD01044637;GBCB01039518;GBCB01111507;XM_013519863;XM_013519864;XM_013519865;XM_013519866;XM_013519867 XP_013375317;XP_013375318;XP_013375319;XP_013375320;XP_013375321 MODEL 8878145 protein-coding LOC102017549 uncharacterized LOC102017549 NW_004955409 35685901 35755271 + 102017549 AGCD01010428;AGCD01010429;AGCD01010430;AGCD01010431;AGCD01010432;GBBH01115785;XM_013510221 XP_013365675 MODEL 8883997 protein-coding Cox7a2l cytochrome c oxidase subunit 7A2 like ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitochondrial respirasome assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955441 9732168 9743052 - 102015775 AGCD01037028;AGCD01037029;GBBH01030574;GBDF01084854;XM_013517633 XP_013373087 MODEL 8884979 protein-coding LOC102020175 olfactory receptor 14I1-like NW_004955581 896179 896982 - 102020175 AGCD01075702;XM_013509732 XP_013365186 MODEL 8811038 protein-coding LOC102005501 chloride channel protein ClC-Ka NW_004955527 2203583 2213969 - 102005501 AGCD01069424;GBCQ01008207;XM_005409849;XM_005409850;XM_013507416 XP_005409906;XP_005409907;XP_013362870 MODEL 8756768 protein-coding Dctn6 dynactin subunit 6 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN microtubule-based process (ortholog); mitotic spindle organization (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog); dynactin complex (ortholog) NW_004955463 6612124 6645962 + 102008201 AGCD01049686;AGCD01049687;AGCD01049688;AGCD01049689;GBBH01229700;GBDF01122568;XM_013521561;XM_013521562 XP_013377015;XP_013377016 MODEL 8909842 protein-coding Itgb5 integrin subunit beta 5 ENCODES a protein that exhibits integrin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); endodermal cell differentiation (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); thyroid gland disease (ortholog); FOUND IN cell leading edge (ortholog); cell surface (ortholog); focal adhesion (ortholog) NW_004955427 23851475 23952211 - 102020591 AGCD01027493;AGCD01027494;AGCD01027495;GBBH01034040;XM_013515122 XP_013370576 MODEL 8908394 ncrna LOC102013783 uncharacterized LOC102013783 NW_004955403 27358673 27399334 + 102013783 AGCD01002317;GBDF01287042;XR_001234401;XR_001234402 MODEL 9055587 pseudo LOC102008782 protein SET-like NW_004955563 171952 176650 - 102008782 AGCD01074050;AGCD01074051 MODEL 8767252 protein-coding Kcnc2 potassium voltage-gated channel subfamily C member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN action potential (ortholog); cellular response to ammonium ion (ortholog); cellular response to nitric oxide (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 103 (ortholog); epilepsy (ortholog); FOUND IN apical plasma membrane (ortholog); axolemma (ortholog); axon (ortholog) NW_004955405 14420447 14599780 - 102020877 AGCD01004923;AGCD01004924;AGCD01004925;AGCD01004926;AGCD01004927;AGCD01004928;GBCE01027931;GBDF01177927;XM_013517673 XP_013373127 MODEL 8845808 protein-coding Abhd12b abhydrolase domain containing 12B NW_004955409 12007471 12036999 - 102017851 AGCD01009530;GBCC01011963;XM_005376804;XM_005376806 XP_005376861;XP_005376863 MODEL 8919269 ncrna LOC102024384 uncharacterized LOC102024384 NW_004955537 2895294 2898325 - 102024384 AGCD01070939;GBCQ01154811;XR_264779 MODEL 39134437 misc_rna 7SK 7SK RNA 8712034 protein-coding Cul5 cullin 5 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cell migration (ortholog); cerebral cortex radially oriented cell migration (ortholog); negative regulation of focal adhesion assembly (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH Brain Injuries (ortholog); Breast Neoplasms (ortholog); Hemorrhagic Shock (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955412 10266072 10336156 + 102014031 AGCD01012764;AGCD01012765;AGCD01012766;GBDF01053200;XM_013510972 XP_013366426 MODEL 8953536 protein-coding LOC102009133 vomeronasal type-1 receptor 4-like NW_004955603 230078 230680 + 102009133 AGCD01076823;XM_005414842 XP_005414899 MODEL 39133442 misc_rna 7SK 7SK RNA 8874823 pseudo LOC102016399 aldose reductase-related protein 2 pseudogene NW_004955424 1563 9210 + 102016399 AGCD01024164;AGCD01024165 MODEL 8845900 ncrna LOC102021639 uncharacterized LOC102021639 NW_004955411 34857471 34861212 + 102021639 AGCD01012416;GBDF01017865;XR_001232828;XR_259953 MODEL 8823933 pseudo LOC102007607 ubiquitin-fold modifier 1 pseudogene NW_004955583 28661 29029 - 102007607 AGCD01075791 MODEL 8939475 pseudo LOC102011433 zinc finger protein 35-like NW_004955414 19831492 19837666 - 102011433 AGCD01015339 MODEL 9015211 pseudo LOC102016030 cyclin-Y-like protein 1 NW_004955460 81107 101125 - 102016030 AGCD01048333 MODEL 8730233 ncrna LOC102014148 uncharacterized LOC102014148 NW_004955423 28261530 28278611 + 102014148 AGCD01024146;XR_261015 MODEL 8799023 ncrna LOC102008020 uncharacterized LOC102008020 NW_004955512 5854546 5876484 - 102008020 AGCD01066779;AGCD01066780;GBCQ01118865;XR_264451 MODEL 8916184 pseudo LOC102015245 RING finger and transmembrane domain-containing protein 1 pseudogene NW_004955547 363840 367226 + 102015245 AGCD01072151 MODEL 39131386 protein-coding CHST13 carbohydrate sulfotransferase 13 8779878 pseudo LOC102008390 intraflagellar transport protein 74 homolog pseudogene NW_004955411 1172768 1173854 - 102008390 AGCD01011473 MODEL 39131518 protein-coding GPR55 G protein-coupled receptor 55 39134130 misc_rna 7SK 7SK RNA 8865858 protein-coding Id3 inhibitor of DNA binding 3, HLH protein ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); leptomycin B binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to leptomycin B (ortholog); central nervous system development (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Burkitt lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 3537352 3538921 - 102016972 AGCD01043929;GBDK01016702;XM_005394768 XP_005394825 MODEL 8827586 pseudo LOC102024389 laccase domain-containing protein 1 pseudogene NW_004955444 15864562 15865847 - 102024389 AGCD01039157 MODEL 8835037 protein-coding Efl1 elongation factor like GTPase 1 ENCODES a protein that exhibits GTPase activity (ortholog); ribosome binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); GTP metabolic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); genetic disease (ortholog); high grade glioma (ortholog) NW_004955416 12658177 12789657 - 102028855 AGCD01017212;GBDI01255378;XM_005381460;XM_005381461;XM_013512538 XP_005381517;XP_005381518;XP_013367992 MODEL 8936120 protein-coding LOC102003694 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like NW_004955538 3385693 3395187 - 102003694 AGCD01071162;GBCE01032832;XM_005410855;XM_013507906;XM_013507908;XM_013507909;XM_013507910;XR_001232100 XP_005410912;XP_013363360;XP_013363362;XP_013363363;XP_013363364 MODEL 8809089 protein-coding LOC102009539 uncharacterized LOC102009539 NW_004955436 8518608 8525672 + 102009539 AGCD01033743;XM_013516636;XM_013516637;XM_013516638 XP_013372090;XP_013372091;XP_013372092 MODEL 9041243 ncrna LOC102016402 uncharacterized LOC102016402 NW_004955506 5201291 5204170 - 102016402 AGCD01065356;GBDI01314103;XR_264356 MODEL 8864043 protein-coding Fbxl8 F-box and leucine rich repeat protein 8 NW_004955484 9452870 9456239 - 102014672 AGCD01058415;GBDK01393588;XM_005403693;XM_005403694;XM_013503961 XP_005403750;XP_005403751;XP_013359415 MODEL 8833527 protein-coding Eps8 EGFR pathway substrate 8, signaling adaptor ENCODES a protein that exhibits actin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 102 (ortholog); autosomal recessive nonsyndromic deafness 106 (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); glutamatergic synapse (ortholog) NW_004955413 12267701 12386088 - 102005356 AGCD01013986;AGCD01013987;AGCD01013988;GBDI01290198;XM_005379018;XM_005379019;XM_005379020 XP_005379075;XP_005379076;XP_005379077 MODEL 8858843 ncrna LOC102020911 uncharacterized LOC102020911 NW_004955416 30982459 31051244 - 102020911 AGCD01017714;AGCD01017715;AGCD01017716;AGCD01017717;AGCD01017718;AGCD01017719;AGCD01017720;AGCD01017721;AGCD01017722;AGCD01017723;AGCD01017724;GBDF01068906;XR_260441 MODEL 8767981 pseudo LOC102020505 non-histone chromosomal protein HMG-17 pseudogene NW_004955449 288367 289486 - 102020505 AGCD01041762 MODEL 9003756 protein-coding Coxfa4 cytochrome c oxidase associated subunit FA4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 21 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) NW_004955432 17502272 17509517 - 102004105 AGCD01031126;GBDF01003997;XM_005388104 XP_005388161 MODEL 8725421 protein-coding Dop1a DOP1 leucine zipper like protein A FOUND IN Golgi apparatus (ortholog); Golgi-associated vesicle (ortholog) NW_004955411 10836060 10903650 + 102012294 AGCD01011794;AGCD01011795;AGCD01011796;GBCE01159794;XM_013510756;XM_013510757 XP_013366210;XP_013366211 MODEL 8961290 protein-coding LOC102013416 butyrophilin subfamily 2 member A2 NW_004955483 413795 498359 - 102013416 AGCD01057609;AGCD01057610;AGCD01057611;AGCD01057612;AGCD01057613;AGCD01057614;AGCD01057615;AGCD01057616;AGCD01057617;AGCD01057618;AGCD01057619;GBDJ01002979;XM_005403285;XM_013503774;XM_013503775;XM_013503776;XM_013503777;XM_013503779;XM_013503780;XM_013503781 XP_005403342;XP_013359228;XP_013359229;XP_013359230;XP_013359231;XP_013359233;XP_013359234;XP_013359235 MODEL 8735828 protein-coding Dctpp1 dCTP pyrophosphatase 1 ENCODES a protein that exhibits dCTP diphosphatase activity (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN dCTP catabolic process (ortholog); DNA protection (ortholog); dTTP catabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955493 7357204 7360034 - 102018841 AGCD01061183;GBDF01090247;XM_005405348 XP_005405405 MODEL 8936987 pseudo LOC102012671 pescadillo homolog pseudogene NW_004955428 5346972 5362433 + 102012671 AGCD01027708;XR_261310 MODEL 8745766 protein-coding Kcnc3 potassium voltage-gated channel subfamily C member 3 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog); INVOLVED IN corpus callosum development (ortholog); cortical actin cytoskeleton organization (ortholog); optic nerve development (ortholog); ASSOCIATED WITH genetic disease (ortholog); spinocerebellar ataxia 13 (ortholog); FOUND IN axolemma (ortholog); axon terminus (ortholog); calyx of Held (ortholog) NW_004955559 782842 795455 + 102021715 AGCD01073612;GBDK01321009;GBDK01321020;XM_013509065 XP_013364519 MODEL 39132241 rrna 5S_rRNA 5S ribosomal RNA 8821855 protein-coding LOC102010279 guanylate-binding protein 6-like NW_004955423 4800576 4831760 + 102010279 AGCD01023545;AGCD01023546;GBDI01220537;XM_005385092;XM_005385093 XP_005385149;XP_005385150 MODEL 39134438 misc_rna 7SK 7SK RNA 8877860 protein-coding Brd7 bromodomain containing 7 ENCODES a protein that exhibits histone binding (ortholog); histone H3K14ac reader activity (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal carcinoma (ortholog); glioblastoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 8425976 8462431 - 102008761 AGCD01031593;AGCD01031594;GBBH01166493;GBCB01024456;XM_013516217 XP_013371671 MODEL 9052014 pseudo LOC102011036 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L pseudogene NW_004955434 9417014 9421344 + 102011036 AGCD01032299;AGCD01032300 MODEL 8896712 pseudo LOC102021640 L-lactate dehydrogenase B chain pseudogene NW_004955464 13204250 13218462 + 102021640 AGCD01050262;AGCD01050263;AGCD01050264 MODEL 39131998 rrna 5S_rRNA 5S ribosomal RNA 8887647 protein-coding Cul7 cullin 7 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); Golgi organization (ortholog); microtubule cytoskeleton organization (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH 3-M syndrome (ortholog); autistic disorder (ortholog); Dwarfism (ortholog); FOUND IN 3M complex (ortholog); centrosome (ortholog); Cul7-RING ubiquitin ligase complex (ortholog) NW_004955437 9003482 9018260 - 102030667 AGCD01034512;AGCD01034513;GBBH01088710;XM_005389748;XM_013516962;XM_013516963 XP_005389805;XP_013372416;XP_013372417 MODEL 8968791 protein-coding Emc9 ER membrane protein complex subunit 9 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog) NW_004955409 36257904 36262120 + 102009357 AGCD01010454;GBDK01277777;XM_005377037 XP_005377094 MODEL 9059924 protein-coding LOC102005505 homeobox protein ESX1-like NW_004955534 3330 9799 + 102005505 AGCD01070431;GBDF01222868;XM_005410423 XP_005410480 MODEL 9065396 pseudo LOC102024392 keratin, type I cytoskeletal 18 pseudogene NW_004955445 5900650 5901318 - 102024392 AGCD01039475 MODEL 8917431 ncrna LOC102011434 uncharacterized LOC102011434 NW_004955470 12696997 12745344 + 102011434 AGCD01052936;AGCD01052937;GBCE01144649;XR_001237028;XR_001237029;XR_263507 MODEL 8741051 ncrna LOC102014544 uncharacterized LOC102014544 NW_004955412 22223042 22224953 - 102014544 AGCD01013041;GBCQ01039251;XR_260009 MODEL 9028282 pseudo LOC102015248 thioredoxin-related transmembrane protein 1-like NW_004955442 16782819 16799267 - 102015248 AGCD01037913;AGCD01037914;AGCD01037915;AGCD01037916 MODEL 8884281 protein-coding Abhd13 abhydrolase domain containing 13 ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN protein depalmitoylation (ortholog); FOUND IN cytoplasm (ortholog); dendrite cytoplasm (ortholog) NW_004955404 3587277 3605649 - 102023865 AGCD01003278;GBCB01088372;XM_005374009 XP_005374066 MODEL 8952216 protein-coding Hras HRas proto-oncogene, GTPase ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to gamma radiation (ortholog); cellular senescence (ortholog); PARTICIPATES IN adenosine signaling pathway; endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955476 11508446 11510333 + 102015839 AGCD01055461;GBBH01092203;XM_005401836;XM_005401837 XP_005401893;XP_005401894 MODEL 10236746 protein-coding LOC106149907 translation initiation factor IF-2-like NW_004955457 7490189 7514301 - 106149907 AGCD01046883;GBCQ01126269;GBDK01124100;XM_013520660 XP_013376114 MODEL 8816439 protein-coding Fbxo10 F-box protein 10 INVOLVED IN regulation of apoptotic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955419 28915083 28969374 + 102006462 AGCD01020479;AGCD01020480;AGCD01020481;GBDF01194829;XM_005382877 XP_005382934 MODEL 8938401 protein-coding Emcn endomucin ENCODES a protein that exhibits carbohydrate binding (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH thyroid gland carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955496 7413228 7498983 + 102020583 AGCD01062379;GBCQ01007628;XM_005406259;XM_005406260 XP_005406316;XP_005406317 MODEL 39131447 protein-coding CRYGC crystallin gamma C 8916616 pseudo LOC102009135 cyclin-G1 pseudogene NW_004955647 79945 80944 + 102009135 AGCD01077761 MODEL 8866049 protein-coding Gpr55 G protein-coupled receptor 55 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); INVOLVED IN bone resorption (ortholog); negative regulation of osteoclast differentiation (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); hyperglycemia (ortholog); Hypertriglyceridemia (ortholog); FOUND IN plasma membrane (ortholog) NW_004955453 4470602 4520036 + 102024754 AGCD01044691;AGCD01044692;GBDF01222892;XM_005395405;XM_005395406;XM_005395407;XM_013519755;XR_001236125 XP_005395462;XP_005395463;XP_005395464;XP_013375209 MODEL 9027412 ncrna LOC102017553 uncharacterized LOC102017553 NW_004955411 11887043 11891142 - 102017553 AGCD01011833;GBDF01079416;XR_259932 MODEL 8882628 protein-coding Il17rb interleukin 17 receptor B INVOLVED IN positive regulation of inflammatory response (ortholog); positive regulation of interleukin-13 production (ortholog); positive regulation of interleukin-5 production (ortholog); ASSOCIATED WITH asthma (ortholog); interstitial lung disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955430 3831665 3847366 + 102004410 AGCD01029228;AGCD01029229;GBCQ01129637;XM_005387375 XP_005387432 MODEL 8802107 pseudo LOC102011882 thioredoxin pseudogene NW_004955494 7209430 7210242 - 102011882 AGCD01061546 MODEL 8949322 protein-coding Angptl5 angiopoietin like 5 NW_004955412 5236268 5254866 - 102008831 AGCD01012621;AGCD01012622;GBDK01366137;XM_005377966 XP_005378023 MODEL 8769579 ncrna LOC102007609 uncharacterized LOC102007609 NW_004955450 683168 685850 - 102007609 AGCD01042342;GBCQ01139779;XR_262512 MODEL 8849067 pseudo LOC102013036 olfactory receptor 2L3-like NW_004955619 80032 80977 + 102013036 AGCD01077334 MODEL 8772136 protein-coding Cxcl8 C-X-C motif chemokine ligand 8 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR chemokine receptor binding (ortholog); heparin binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN chemokine (C-X-C motif) ligand 8 signaling pathway; mTOR signaling pathway; syndecan signaling pathway; ASSOCIATED WITH otitis media; acute asthma (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog) NW_004955474 247326 250355 + 102003438 AGCD01054209;GBBH01138820;XM_013502794 XP_013358248 MODEL 8953739 ncrna LOC102016403 uncharacterized LOC102016403 NW_004955429 6520317 6531549 - 102016403 AGCD01028550;GBDF01278048;XR_001234524 MODEL 8740141 pseudo LOC102020178 T-complex protein 1 subunit alpha pseudogene NW_004955449 259525 261023 + 102020178 AGCD01041762 MODEL 8839556 protein-coding LOC102003701 vomeronasal type-1 receptor 1-like NW_004955558 687163 688056 + 102003701 AGCD01073385;XM_005412741 XP_005412798 MODEL 8882702 protein-coding Brd8 bromodomain containing 8 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH colorectal adenocarcinoma (ortholog); endometriosis (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955418 2232853 2275812 + 102005259 AGCD01018753;AGCD01018754;GBCE01097970;XM_005382124;XM_005382125;XM_005382126;XM_005382127;XM_005382128;XM_005382129;XM_005382130;XM_013512994;XM_013512995;XM_013512996;XM_013512997 XP_005382181;XP_005382182;XP_005382183;XP_005382184;XP_005382185;XP_005382186;XP_005382187;XP_013368448;XP_013368449;XP_013368450;XP_013368451 MODEL 9015649 ncrna LOC102008027 uncharacterized LOC102008027 NW_004955530 1812786 1910843 - 102008027 AGCD01069900;AGCD01069901;AGCD01069902;GBDF01148074;XR_001232002 MODEL 8998851 protein-coding LOC102013784 cell division control protein 45 homolog NW_004955811 4973 14812 + 102013784 AGCD01078393;GBBH01171184;XM_005415119 XP_005415176 MODEL 9000346 pseudo LOC102020512 optineurin pseudogene NW_004955623 85965 87245 + 102020512 AGCD01077409 MODEL 8837563 ncrna LOC102015643 uncharacterized LOC102015643 NW_004955422 29155045 29182205 + 102015643 AGCD01023379;GBCB01061039;XR_001233972;XR_001233973 MODEL 8887040 protein-coding LOC102008392 olfactory receptor 147-like NW_004955412 25370885 25371823 - 102008392 AGCD01013151;XM_005378421 XP_005378478 MODEL 39133444 misc_rna 7SK 7SK RNA 8890062 protein-coding Coxfa4l2 cytochrome c oxidase hypoxia associated subunit FA4L2 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); negative regulation of mitochondrial electron transport, NADH to ubiquinone (ortholog); negative regulation of reactive oxygen species biosynthetic process (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 4962868 4965838 - 102021854 AGCD01047446;GBDF01052187;XM_005397349 XP_005397406 MODEL 8722000 protein-coding LOC102019110 natural resistance-associated macrophage protein 2-like NW_004955547 1413554 1447203 - 102019110 AGCD01072222;AGCD01072223;GBDJ01084229;XM_013508457 XP_013363911 MODEL 9024466 protein-coding Itgb6 integrin subunit beta 6 ENCODES a protein that exhibits coreceptor activity (ortholog); integrin binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN amelogenesis (ortholog); bone development (ortholog); bronchiole development (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH amelogenesis imperfecta type 1H (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); focal adhesion (ortholog) NW_004955449 13387013 13520879 + 102026693 AGCD01042135;AGCD01042136;AGCD01042137;AGCD01042138;GBCB01023147;XM_005393349;XM_005393354;XM_013518789 XP_005393406;XP_005393411;XP_013374243 MODEL 8708122 protein-coding Efna1 ephrin A1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); endocardial cushion to mesenchymal transition involved in heart valve formation (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; hypoxia inducible factor pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN focal adhesion (ortholog); plasma membrane (ortholog) NW_004955545 1610929 1617217 + 102025845 AGCD01071863;GBBH01228706;XM_005411571 XP_005411628 MODEL 8880698 pseudo LOC102016033 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 pseudogene NW_004955464 11739354 11741775 + 102016033 AGCD01050161 MODEL 39131319 protein-coding CRYGN crystallin gamma N 9038087 pseudo LOC102007611 60 kDa heat shock protein, mitochondrial pseudogene NW_004955402 53200161 53201948 + 102007611 AGCD01001363 MODEL 10277301 protein-coding Chst13 carbohydrate sulfotransferase 13 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog) NW_004955421 21770083 21787563 + 106148435 AGCD01022117;AGCD01022118;AGCD01022119;GBCE01150800;XM_013513809 XP_013369263 MODEL 8993982 protein-coding LOC102008784 leukocyte immunoglobulin-like receptor subfamily A member 2 NW_004955567 1128512 1147473 + 102008784 AGCD01074460;GBDK01141152;XM_013509292;XM_013509293;XM_013509294;XM_013509295;XM_013509296;XM_013509297;XM_013509298;XM_013509299;XR_001232407 XP_013364746;XP_013364747;XP_013364748;XP_013364749;XP_013364750;XP_013364751;XP_013364752;XP_013364753 MODEL 39134131 misc_rna 7SK 7SK RNA 8887140 protein-coding LOC102013418 actin-like NW_004955420 22322153 22323606 - 102013418 AGCD01021196;GBCQ01147818;XM_013513570 XP_013369024 MODEL 8751383 protein-coding LOC102024394 uncharacterized LOC102024394 NW_004955570 564487 673072 + 102024394 AGCD01074742;AGCD01074743;AGCD01074744;AGCD01074745;AGCD01074746;AGCD01074747;AGCD01074748;AGCD01074749;AGCD01074750;AGCD01074751;AGCD01074752;AGCD01074753;AGCD01074754;XM_013509383 XP_013364837 MODEL 9018778 pseudo LOC102012675 uncharacterized LOC102012675 NW_004955429 6718846 6761193 + 102012675 AGCD01028560;AGCD01028561;AGCD01028562;AGCD01028563;AGCD01028564 MODEL 8787038 protein-coding Dop1b DOP1 leucine zipper like protein B INVOLVED IN cognition (ortholog); embryonic pattern specification (ortholog); ASSOCIATED WITH keratoconus (ortholog); FOUND IN early endosome membrane (ortholog) NW_004955407 35437765 35517861 + 102009254 AGCD01007743;AGCD01007744;GBCE01064891;XM_013504576;XM_013504580 XP_013360030;XP_013360034 MODEL 39132243 rrna 5S_rRNA 5S ribosomal RNA 8757033 protein-coding Dcun1d1 defective in cullin neddylation 1 domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); regulation of protein neddylation (ortholog); regulation of protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); ubiquitin ligase complex (ortholog) NW_004955420 11706649 11747471 - 102022502 AGCD01020830;AGCD01020831;AGCD01020832;GBBH01149746;GBDF01296186;XM_013513568 XP_013369022 MODEL 9036422 protein-coding Angptl6 angiopoietin like 6 ASSOCIATED WITH COVID-19 (ortholog); gestational diabetes (ortholog); hepatocellular carcinoma (ortholog); FOUND IN secretory granule (ortholog) NW_004955495 1437024 1446328 - 102026544 AGCD01061691;AGCD01061692;GBBH01135211;GBDF01122182;XM_013505314;XM_013505315 XP_013360768;XP_013360769 MODEL 39131409 protein-coding KCNC3 potassium voltage-gated channel subfamily C member 3 9056455 protein-coding Dgke diacylglycerol kinase epsilon ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); genetic disease (ortholog); hemolytic-uremic syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955451 5966773 5988004 - 102013367 AGCD01043194;GBDF01052985;GBDF01154242;XM_005394069 XP_005394126 MODEL 9046153 protein-coding Id4 inhibitor of DNA binding 4, HLH protein ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN brain development (ortholog); central nervous system myelination (ortholog); cerebral cortex neuron differentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955483 6598804 6601496 - 102017128 AGCD01057783;GBCE01000857;GBDI01072421;XM_005403387 XP_005403444 MODEL 9032373 ncrna LOC102011037 uncharacterized LOC102011037 NW_004955435 7325862 7336787 - 102011037 AGCD01032952;AGCD01032953;AGCD01032954;GBDF01178841;XR_261667 MODEL 9029493 pseudo LOC102014150 ribosome biogenesis protein NSA2 homolog pseudogene NW_004955424 8502072 8502854 - 102014150 AGCD01024472 MODEL 8935459 protein-coding Hrc histidine rich calcium binding protein ENCODES a protein that exhibits ATPase binding (ortholog); calcium ion binding (ortholog); calcium ion sequestering activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); negative regulation of calcium ion import into sarcoplasmic reticulum (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH Body Weight (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN endoplasmic reticulum (ortholog); sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) NW_004955559 1583661 1587457 + 102023305 AGCD01073652;GBDF01125598;XM_005412905;XM_005412907 XP_005412962;XP_005412964 MODEL 8989933 pseudo LOC102009138 heterogeneous nuclear ribonucleoprotein M pseudogene NW_004955403 28891551 28908137 - 102009138 AGCD01002352 MODEL 8875574 protein-coding Il17rc interleukin 17 receptor C ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN defense response to fungus (ortholog); granulocyte chemotaxis (ortholog); interleukin-17A-mediated signaling pathway (ortholog); ASSOCIATED WITH Candidiasis, Familial, 9 (ortholog); Experimental Liver Cirrhosis (ortholog); interstitial lung disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955561 1410100 1423041 + 102010952 AGCD01073855;GBCB01095866;XM_005413040;XM_005413041;XM_005413042;XM_005413044;XM_013509087;XM_013509088 XP_005413097;XP_005413098;XP_005413099;XP_005413101;XP_013364541;XP_013364542 MODEL 8927919 protein-coding Eps8l1 EPS8 signaling adaptor L1 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); T cell receptor binding (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ruffle membrane (ortholog) NW_004955567 1074714 1084259 - 102006837 AGCD01074458;AGCD01074459;GBCE01000821;XM_013509255;XM_013509256;XM_013509257;XM_013509258 XP_013364709;XP_013364710;XP_013364711;XP_013364712 MODEL 8877767 ncrna LOC102005511 uncharacterized LOC102005511 NW_004955545 2705974 2709122 - 102005511 AGCD01071919;GBDI01034537;XR_001232179;XR_264880 MODEL 8908789 ncrna LOC102003703 uncharacterized LOC102003703 NW_004955444 18667764 18677902 + 102003703 AGCD01039249;GBBH01195406;XR_001235492 MODEL 8799804 protein-coding Efna2 ephrin A2 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); bone remodeling (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; FOUND IN neuromuscular junction (ortholog); perikaryon (ortholog) NW_004955495 6614828 6627287 - 102007446 AGCD01062085;GBBH01085949;XM_013505059 XP_013360513 MODEL 8883098 protein-coding LOC102016034 coiled-coil domain-containing protein 162-like NW_004955411 34332752 34419714 + 102016034 AGCD01012397;AGCD01012398;AGCD01012399;GBCB01021639;XM_013510808;XM_013510809;XM_013510811;XM_013510812;XM_013510813;XM_013510814;XM_013510815 XP_013366262;XP_013366263;XP_013366265;XP_013366266;XP_013366267;XP_013366268;XP_013366269 MODEL 9036915 pseudo LOC102010280 tubulin-folding cofactor B pseudogene NW_004955495 5024249 5025001 + 102010280 AGCD01061970 MODEL 8717172 pseudo LOC102008034 MAP3K12-binding inhibitory protein 1 pseudogene NW_004955441 160336 161394 + 102008034 AGCD01036685 MODEL 8800660 protein-coding LOC102014546 scavenger receptor cysteine-rich type 1 protein M130 NW_004955413 5044633 5071935 - 102014546 AGCD01013647;GBDI01077768;XM_005378865;XM_013511513 XP_005378922;XP_013366967 MODEL 9002280 protein-coding LOC102008394 arachidonate 12-lipoxygenase, 12S-type NW_004955467 9919322 9931806 - 102008394 AGCD01051535;AGCD01051536;GBBH01140041;XM_005399578 XP_005399635 MODEL 10121481 protein-coding LOC106149908 translation initiation factor IF-2-like NW_004955457 7661508 7684550 + 106149908 AGCD01046885;GBDF01185661;XM_013520661 XP_013376115 MODEL 8808602 protein-coding Abhd14a abhydrolase domain containing 14A FOUND IN cytoplasm (ortholog) NW_004955532 3612440 3624797 + 102023394 AGCD01070289;AGCD01070290;AGCD01070291;GBCQ01179200;XM_005410333;XM_013507619 XP_005410390;XP_013363073 MODEL 8966085 protein-coding LOC102012676 guanylate cyclase soluble subunit beta-2-like NW_004955431 4387868 4457281 - 102012676 AGCD01029996;AGCD01029997;AGCD01029998;AGCD01029999;XM_013515724 XP_013371178 MODEL 8709853 protein-coding LOC102009550 olfactory receptor 5AU1 NW_004955550 1921231 1923589 - 102009550 AGCD01072598;XM_013508583 XP_013364037 MODEL 8999725 protein-coding Coxfa4l3 cytochrome c oxidase associated subunit FA4L3 FOUND IN mitochondrion (ortholog); nucleus (ortholog) NW_004955409 8023847 8027043 - 102020092 AGCD01009374;GBDF01009619;XM_005376729;XM_005376730 XP_005376786;XP_005376787 MODEL 8723360 ncrna LOC102011884 uncharacterized LOC102011884 NW_004955424 343712 352617 - 102011884 AGCD01024172;AGCD01024173;GBDF01052736;XR_261019 MODEL 8706302 protein-coding Emd emerin ENCODES a protein that exhibits actin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cellular response to growth factor stimulus (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955580 864532 866904 - 102027697 AGCD01075627;GBDK01089927;XM_005414187 XP_005414244 MODEL 8756426 protein-coding LOC102020914 complement C5-like NW_004955419 6953649 6990113 + 102020914 AGCD01019867;GBDI01318814;XM_005382579;XM_013513188 XP_005382636;XP_013368642 MODEL 8838588 protein-coding Gpr6 G protein-coupled receptor 6 ENCODES a protein that exhibits sphingosine-1-phosphate receptor activity (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog) NW_004955411 34781598 34783926 + 102021322 AGCD01012416;XM_005377881 XP_005377938 MODEL 8875705 protein-coding LOC102016406 olfactory receptor 8H1-like NW_004955511 1232068 1233015 + 102016406 AGCD01066360;XM_005408227 XP_005408284 MODEL 8730328 protein-coding LOC102020180 laminin subunit alpha-3-like NW_004955402 11841530 11911794 + 102020180 AGCD01000314;AGCD01000315;AGCD01000316;AGCD01000317;AGCD01000318;AGCD01000319;AGCD01000320;AGCD01000321;AGCD01000322;GBDK01270984;XM_013505348 XP_013360802 MODEL 8721203 protein-coding Itgb7 integrin subunit beta 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); cell-matrix adhesion involved in ameboidal cell migration (ortholog); heterotypic cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; integrin mediated signaling pathway; FOUND IN cell surface (ortholog); integrin alpha4-beta7 complex (ortholog); receptor complex (ortholog) NW_004955458 460619 478361 - 102016026 AGCD01047127;AGCD01047128;AGCD01047129;GBCE01104733;XM_005397161;XM_013520946 XP_005397218;XP_013376400 MODEL 9049183 ncrna LOC102011435 uncharacterized LOC102011435 NW_004955414 23356883 23359067 - 102011435 AGCD01015497;XR_260190 MODEL 8796312 protein-coding LOC102017554 stromelysin-1 NW_004955412 6019457 6027604 - 102017554 AGCD01012664;GBDJ01341055;XM_005377987 XP_005378044 MODEL 9066264 pseudo LOC102015648 cytochrome b-c1 complex subunit 7 pseudogene NW_004955500 6288689 6290469 - 102015648 AGCD01063875;XM_005406608 MODEL 9001454 ncrna LOC102007612 uncharacterized LOC102007612 NW_004955451 5393479 5395031 - 102007612 AGCD01043166;GBDF01289099;XR_262582 MODEL 8951351 pseudo LOC102008786 coiled-coil domain-containing protein 152-like NW_004955569 1719680 1720876 - 102008786 AGCD01074678 MODEL 39134439 misc_rna 7SK 7SK RNA 39133448 misc_rna 7SK 7SK RNA 8956036 protein-coding Chst14 carbohydrate sulfotransferase 14 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan metabolic process (ortholog); ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); autism spectrum disorder (ortholog); clubfoot (ortholog) NW_004955416 7391281 7393137 + 102021967 AGCD01016977;GBCQ01154295;GBDJ01229673;XM_005381242 XP_005381299 MODEL 8902002 pseudo LOC102021641 cytoskeleton-associated protein 2 pseudogene NW_004955411 29344641 29345901 - 102021641 AGCD01012235 MODEL 39131999 rrna 5S_rRNA 5S ribosomal RNA 39132244 rrna 5S_rRNA 5S ribosomal RNA 39134132 misc_rna 7SK 7SK RNA 8726769 protein-coding LOC102013037 solute carrier organic anion transporter family member 5A1-like NW_004955655 54988 70910 - 102013037 AGCD01077842;GBCB01004342;GBDF01097203;XM_013510175 XP_013365629 MODEL 8975539 protein-coding Kcnc4 potassium voltage-gated channel subfamily C member 4 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN axon development (ortholog); cerebral cortex development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Hyperalgesia (ortholog); sciatic neuropathy (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); calyx of Held (ortholog) NW_004955435 13728272 13750420 + 102016413 AGCD01033210;AGCD01033211;GBCB01000104;XM_005388914;XM_005388916;XM_005388917 XP_005388971;XP_005388973;XP_005388974 MODEL 8828322 protein-coding LOC102019111 keratin, type II cytoskeletal 6A NW_004955547 2871318 2880666 - 102019111 AGCD01072300;GBDJ01268420;XM_005411965 XP_005412022 MODEL 9014307 pseudo LOC102012678 60S ribosomal protein L26 pseudogene NW_004955523 522319 523767 - 102012678 AGCD01068463 MODEL 8855312 protein-coding Crygn crystallin gamma N NW_004955491 5780537 5788655 - 102009066 AGCD01060503;GBDI01374472;XM_013504567 XP_013360021 MODEL 8961807 protein-coding Cxcl9 C-X-C motif chemokine ligand 9 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemotaxis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955433 724566 731945 - 102009209 AGCD01031335;GBDK01027907;XM_005388165 XP_005388222 MODEL 8765062 ncrna LOC102015250 uncharacterized LOC102015250 NW_004955444 3423922 3425125 + 102015250 AGCD01038790;GBDF01085447;XR_262235 MODEL 8964818 protein-coding LOC102009139 phosphatidylcholine transfer protein-like NW_004955451 6915885 6945860 - 102009139 AGCD01043218;AGCD01043219;AGCD01043220;GBDK01010809;XM_013519061 XP_013374515 MODEL 9036982 pseudo LOC102013785 transcription elongation factor B polypeptide 1 pseudogene NW_004955403 40364261 40364595 + 102013785 AGCD01002683 MODEL 9068203 pseudo LOC102020513 cytochrome c-like NW_004955403 23033301 23033617 - 102020513 AGCD01002238 MODEL 8784056 protein-coding Brd9 bromodomain containing 9 ENCODES a protein that exhibits histone reader activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH Sezary's disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog) NW_004955504 416145 434132 - 102028991 AGCD01064819;GBCE01000275;XM_005407029;XM_005407030;XM_013505887;XM_013505888;XM_013505889 XP_005407086;XP_005407087;XP_013361341;XP_013361342;XP_013361343 MODEL 8737418 protein-coding LOC102020183 leukocyte immunoglobulin-like receptor subfamily B member 1 NW_004955604 22736 25050 + 102020183 AGCD01076859;GBBH01115395;GBCE01054578;XM_005414876 XP_005414933 MODEL 8720467 protein-coding Il17rd interleukin 17 receptor D INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); arteriovenous malformations of the brain (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955430 6842756 6873195 - 102013322 AGCD01029316;GBDK01095576;GBDK01353156;XM_013515704 XP_013371158 MODEL 8912044 protein-coding Fbxo11 F-box protein 11 ENCODES a protein that exhibits protein-arginine N-methyltransferase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); positive regulation of protein catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH breast carcinoma (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955441 14471283 14495508 - 102018337 AGCD01037208;GBBH01229305;XM_005390992;XM_005390993 XP_005391049;XP_005391050 MODEL 9010183 protein-coding LOC102003706 WAP four-disulfide core domain protein 6A-like NW_004955445 11697127 11701399 + 102003706 AGCD01039713;GBDF01265082;XM_005392421 XP_005392478 MODEL 8974701 pseudo LOC102008035 epimerase family protein SDR39U1 pseudogene NW_004955548 325489 327240 - 102008035 AGCD01072330 MODEL 8911819 protein-coding Cul9 cullin 9 INVOLVED IN microtubule cytoskeleton organization (ortholog); protein ubiquitination (ortholog); regulation of mitotic nuclear division (ortholog); ASSOCIATED WITH imperforate anus (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog) NW_004955437 9109997 9145181 + 102004519 AGCD01034516;AGCD01034517;AGCD01034518;GBDJ01353552;XM_013516908 XP_013372362 MODEL 8965782 protein-coding Dcun1d2 defective in cullin neddylation 1 domain containing 2 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); regulation of protein neddylation (ortholog); ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955404 463238 491385 + 102002986 AGCD01003202;GBDI01220195;XM_005373939;XM_005373940;XM_005373941;XM_013515539;XM_013515541;XM_013515553 XP_005373996;XP_005373997;XP_005373998;XP_013370993;XP_013370995;XP_013371007 MODEL 8980737 protein-coding Dgkg diacylglycerol kinase gamma ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955420 21296515 21481651 + 102007235 AGCD01021134;AGCD01021135;AGCD01021136;AGCD01021137;AGCD01021138;GBBH01017583;XM_005383282;XM_005383283;XM_005383284 XP_005383339;XP_005383340;XP_005383341 MODEL 8717294 ncrna LOC102013421 uncharacterized LOC102013421 NW_004955487 9461547 9465656 - 102013421 AGCD01059459;XR_263994 MODEL 8777948 pseudo LOC102024396 coiled-coil domain-containing protein 152-like NW_004955575 268995 270575 + 102024396 AGCD01075210 MODEL 8862861 protein-coding Itgb8 integrin subunit beta 8 ENCODES a protein that exhibits coreceptor activity (ortholog); extracellular matrix protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); cell-matrix adhesion (ortholog); ganglioside metabolic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); endometriosis (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cell surface (ortholog); integrin alphav-beta8 complex (ortholog) NW_004955410 23011874 23099191 + 102003631 AGCD01011091;AGCD01011092;GBCE01145783;XM_005377365 XP_005377422 MODEL 9044543 protein-coding Eme1 essential meiotic structure-specific endonuclease 1 ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN double-strand break repair (ortholog); replication fork processing (ortholog); resolution of mitotic recombination intermediates (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); Holliday junction resolvase complex (ortholog) NW_004955451 11328759 11336099 - 102014521 AGCD01043349;GBDK01116633;XM_005394175;XM_013519096 XP_005394232;XP_013374550 MODEL 8709419 pseudo LOC102016036 gamma-secretase subunit APH-1A pseudogene NW_004955465 10446172 10447450 - 102016036 AGCD01050510 MODEL 8922939 protein-coding LOC102017558 inactive serine/threonine-protein kinase TEX14-like NW_004955468 2755885 2769051 + 102017558 AGCD01051835;AGCD01051836;GBDF01121864;XM_013522507;XM_013522508;XM_013522509;XM_013522510;XM_013522511;XM_013522512;XM_013522513;XM_013522515;XR_001236935 XP_013377961;XP_013377962;XP_013377963;XP_013377964;XP_013377965;XP_013377966;XP_013377967;XP_013377969 MODEL 8855261 ncrna LOC102007614 uncharacterized LOC102007614 NW_004956066 2115 8161 - 102007614 AGCD01078986;GBDI01339207;XR_001232606;XR_265204 MODEL 39134440 misc_rna 7SK 7SK RNA 39132245 rrna 5S_rRNA 5S ribosomal RNA 8710746 protein-coding LOC102021642 serpin B9-like NW_004955465 10392685 10403396 - 102021642 AGCD01050508;XM_005398915 XP_005398972 MODEL 8965912 protein-coding LOC102008396 apolipoprotein L6-like NW_004955413 21987513 22022979 + 102008396 AGCD01014278;AGCD01014279;GBDF01146804;XM_013511275 XP_013366729 MODEL 10226362 protein-coding LOC106149910 uncharacterized LOC106149910 NW_004955457 10351685 10352493 - 106149910 AGCD01046954;GBCQ01113664;XM_013520666 XP_013376120 MODEL 8702352 pseudo LOC102011889 KATNB1-like protein 1 NW_004955426 24920133 24920909 - 102011889 AGCD01026698 MODEL 8929860 protein-coding Ide insulin degrading enzyme ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta metabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Cognitive Dysfunction (ortholog); diabetic encephalopathy (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955425 819461 926440 + 102006593 AGCD01025202;AGCD01025203;AGCD01025204;AGCD01025205;AGCD01025206;GBDI01296471;XM_005385825 XP_005385882 MODEL 8947337 protein-coding Hrg histidine rich glycoprotein ENCODES a protein that exhibits heme binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to fungus (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Carotid Atherosclerosis (ortholog); hemorrhagic disease (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955420 21020938 21033022 - 102030319 AGCD01021119;GBDI01006649;XM_005383268 XP_005383325 MODEL 8846088 protein-coding Chst15 carbohydrate sulfotransferase 15 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate binding (ortholog); N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity (ortholog); INVOLVED IN hexose biosynthetic process (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog) NW_004955477 2065251 2147565 - 102028294 AGCD01055517;GBDI01354926;XM_005401967;XM_013503071;XM_013503072;XM_013503073;XM_013503074 XP_005402024;XP_013358525;XP_013358526;XP_013358527;XP_013358528 MODEL 8812860 pseudo LOC102016409 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955521 3670616 3671516 + 102016409 AGCD01068239 MODEL 8857539 protein-coding LOC102008036 myelin P2 protein NW_004955444 162419 167955 + 102008036 AGCD01038653;GBBH01135207;XM_005392055 XP_005392112 MODEL 8841331 protein-coding Crygs crystallin gamma S ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 20 multiple types (ortholog); genetic disease (ortholog) NW_004955420 21137964 21144206 + 102005149 AGCD01021127;GBDK01040955;XM_005383275 XP_005383332 MODEL 8744950 protein-coding Cp ceruloplasmin ENCODES a protein that exhibits copper ion binding (ortholog); ferroxidase activity (ortholog); glutathione peroxidase activity (ortholog); INVOLVED IN CAMKK-AMPK signaling cascade (ortholog); fatty acid oxidation (ortholog); female pregnancy (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; iron efflux pathway; ASSOCIATED WITH aceruloplasminemia (ortholog); acute kidney failure (ortholog); Albuminuria (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) NW_004955448 470063 522909 - 102016651 AGCD01041232;AGCD01041233;GBDI01091505;XM_005392985;XM_005392987;XM_005392988;XM_013518624 XP_005393042;XP_005393044;XP_005393045;XP_013374078 MODEL 8983413 protein-coding Efna3 ephrin A3 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); negative regulation of angiogenesis (ortholog); positive regulation of amyloid precursor protein catabolic process (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis NW_004955545 1570351 1578610 + 102024852 AGCD01071860;AGCD01071861;GBBH01189460;XM_005411568;XM_005411570;XM_013508362;XM_013508363 XP_005411625;XP_005411627;XP_013363816;XP_013363817 MODEL 9028639 protein-coding Gpr61 G protein-coupled receptor 61 ENCODES a protein that exhibits arrestin family protein binding (ortholog); INVOLVED IN ligand-independent adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog); receptor complex (ortholog) NW_004955435 12929709 12961755 + 102003581 AGCD01033174;AGCD01033175;AGCD01033176;GBBH01078341;XM_005388870;XR_001234859 XP_005388927 MODEL 9028170 protein-coding Eps8l2 EPS8 signaling adaptor L2 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 106 (ortholog); Meniere's disease (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ruffle membrane (ortholog) NW_004955476 11371928 11390588 - 102012192 AGCD01055454;AGCD01055455;AGCD01055456;GBBH01063738;GBDI01006668;XM_005401820 XP_005401877 MODEL 9020724 protein-coding Dorip1 dopamine receptor interacting protein 1 NW_004955409 17014194 17023953 - 102011283 AGCD01009756;GBCB01024211;XM_005376875 XP_005376932 MODEL 8912875 pseudo LOC102015252 CD209 antigen-like protein E NW_004955563 1428249 1432409 - 102015252 AGCD01074147 MODEL 8926172 ncrna LOC102010281 uncharacterized LOC102010281 NW_004955497 1128473 1136942 + 102010281 AGCD01062452;XR_001231423;XR_264189 MODEL 8804901 ncrna LOC102008788 uncharacterized LOC102008788 NW_004955446 7907980 7940327 - 102008788 AGCD01040132;AGCD01040133;GBBH01101806;XR_001235659;XR_001235660;XR_001235661;XR_001235662;XR_001235663;XR_262390 MODEL 8756076 protein-coding LOC102005515 zinc finger protein 350 NW_004955558 546358 562360 + 102005515 AGCD01073376;GBBH01131689;XM_005412662;XM_005412664;XM_005412665;XM_005412666;XM_005412667;XM_005412668;XM_013508866;XM_013508867 XP_005412719;XP_005412721;XP_005412722;XP_005412723;XP_005412724;XP_005412725;XP_013364320;XP_013364321 MODEL 8769031 pseudo LOC102015650 ADP-ribose pyrophosphatase, mitochondrial pseudogene NW_004955425 2036996 2038353 + 102015650 AGCD01025251 MODEL 9035385 protein-coding Cxcr1 C-X-C motif chemokine receptor 1 ENCODES a protein that exhibits interleukin-8 binding (ortholog); interleukin-8 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog) NW_004955453 15181027 15196224 + 102015802 AGCD01044886;GBDF01195511;XM_005395665;XM_013519957;XM_013519958;XM_013519959 XP_005395722;XP_013375411;XP_013375412;XP_013375413 MODEL 39133459 misc_rna 7SK 7SK RNA 8782271 ncrna LOC102020185 uncharacterized LOC102020185 NW_004955403 16028869 16105664 - 102020185 AGCD01002056;AGCD01002057;AGCD01002058;GBDI01162203;XR_001233327;XR_001233329 MODEL 8868229 protein-coding Abhd14b abhydrolase domain containing 14B ENCODES a protein that exhibits hydrolase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955532 3615214 3619637 - 102023739 AGCD01070290;GBBH01228009;GBDI01068224;XM_005410334 XP_005410391 MODEL 39134133 misc_rna 7SK 7SK RNA 8974772 ncrna LOC102013039 uncharacterized LOC102013039 NW_004955403 57271566 57272877 + 102013039 AGCD01003149;GBCB01111792;XR_259280 MODEL 8817975 pseudo LOC102009551 ATP synthase F(0) complex subunit C1, mitochondrial pseudogene NW_004955442 7881091 7881501 + 102009551 AGCD01037628 MODEL 8700157 protein-coding Brdt bromodomain testis associated ENCODES a protein that exhibits histone binding (ortholog); histone H4 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH azoospermia (ortholog); oligospermia (ortholog); primary ovarian insufficiency (ortholog); FOUND IN nucleus (ortholog) NW_004955423 2434146 2498523 - 102027081 AGCD01023473;AGCD01023474;AGCD01023475;AGCD01023476;AGCD01023477;GBDF01048977;XM_005385061;XM_013514358;XM_013514359 XP_005385118;XP_013369812;XP_013369813 MODEL 8995744 ncrna LOC102011891 uncharacterized LOC102011891 NW_004955429 17730248 17732306 - 102011891 AGCD01028865;GBDF01041050;XR_261353 MODEL 8950958 protein-coding LOC102019112 olfactory receptor 11H12-like NW_004955550 163342 164301 - 102019112 AGCD01072485;XM_013508545 XP_013363999 MODEL 8814261 protein-coding Fbxo15 F-box protein 15 FOUND IN SCF ubiquitin ligase complex (ortholog) NW_004955402 57524726 57586198 - 102009785 AGCD01001500;AGCD01001501;GBDF01122261;XM_005373067;XM_005373069;XM_005373071;XM_005373072;XM_005373073;XM_005373074;XM_013511393 XP_005373124;XP_005373126;XP_005373128;XP_005373129;XP_005373130;XP_005373131;XP_013366847 MODEL 8942096 protein-coding Kcnd1 potassium voltage-gated channel subfamily D member 1 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); PARTICIPATES IN excitatory synaptic transmission pathway; long term potentiation; ASSOCIATED WITH Dwarfism (ortholog); FOUND IN neuronal cell body (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955543 487312 500232 - 102003696 AGCD01071587;GBDJ01236112;XM_005411304;XM_005411305;XM_013508157 XP_005411361;XP_005411362;XP_013363611 MODEL 8946419 protein-coding LOC102009144 complement receptor type 1 NW_004955406 42927757 42997196 + 102009144 AGCD01006720;AGCD01006721;AGCD01006722;AGCD01006723;GBBH01063618;GBCE01049944;XM_013503302 XP_013358756 MODEL 8714655 protein-coding LOC102011437 phospholipid-transporting ATPase FetA-like NW_004955472 770636 868645 - 102011437 AGCD01053355;AGCD01053356;AGCD01053357;AGCD01053358;AGCD01053359;AGCD01053360;AGCD01053361;AGCD01053362;AGCD01053363;GBDK01126213;XM_005401014;XM_005401015;XM_013523039;XM_013523040;XM_013523041;XM_013523042;XM_013523043 XP_005401071;XP_005401072;XP_013378493;XP_013378494;XP_013378495;XP_013378496;XP_013378497 MODEL 8724815 ncrna LOC102016414 uncharacterized LOC102016414 NW_004955527 3800944 3816667 - 102016414 AGCD01069485;AGCD01069486;GBDF01176376;XR_264675 MODEL 9054332 protein-coding LOC102014551 olfactory receptor 56A4-like NW_004955414 21827329 21828279 - 102014551 AGCD01015433;XM_005380114 XP_005380171 MODEL 8787852 ncrna LOC102013431 uncharacterized LOC102013431 NW_004955504 2733042 2738476 - 102013431 AGCD01064859;AGCD01064860;GBDF01281745;XR_264289 MODEL 8981767 protein-coding LOC102014151 uncharacterized LOC102014151 NW_004955497 4505827 4537655 + 102014151 AGCD01062577;AGCD01062578;AGCD01062579;GBDF01128812;XM_013505451 XP_013360905 MODEL 8747246 protein-coding Efna4 ephrin A4 ENCODES a protein that exhibits ephrin receptor binding (ortholog) NW_004955545 1557107 1561234 + 102024509 AGCD01071859;GBDF01210187;XM_005411567 XP_005411624 MODEL 8920625 pseudo LOC102020915 DNA/RNA-binding protein KIN17 pseudogene NW_004955484 6621201 6622379 - 102020915 AGCD01058284 MODEL 8904572 protein-coding LOC102011040 olfactory receptor 56-like NW_004955530 191959 192906 + 102011040 AGCD01069832;XM_005410119 XP_005410176 MODEL 8918170 protein-coding Il17re interleukin 17 receptor E NW_004955561 1397286 1409999 + 102013018 AGCD01073855;GBDF01255893;XM_005413048;XM_005413049;XM_005413050 XP_005413105;XP_005413106;XP_005413107 MODEL 39133460 misc_rna 7SK 7SK RNA 8824120 ncrna LOC102012680 uncharacterized LOC102012680 NW_004955435 7947806 7951442 - 102012680 AGCD01032982;GBDF01049854;XR_001234875;XR_001234876;XR_001234877 MODEL 8740002 pseudo LOC102010284 general transcription factor 3C polypeptide 6 pseudogene NW_004955500 4949060 4951908 + 102010284 AGCD01063817 MODEL 8981513 protein-coding LOC102003707 vomeronasal type-1 receptor 2-like NW_004955569 1079109 1080002 - 102003707 AGCD01074636;XM_013509364 XP_013364818 MODEL 9040167 protein-coding CUNH10orf105 chromosome unknown C10orf105 homolog ASSOCIATED WITH autosomal recessive nonsyndromic deafness 12 (ortholog); Usher syndrome (ortholog) NW_004955437 19767395 19772447 + 102004321 AGCD01034865;GBDF01170530;XM_005390023;XM_005390024;XM_005390025;XM_005390026 XP_005390080;XP_005390081;XP_005390082;XP_005390083 MODEL 8804473 protein-coding LOC102021647 major allergen I polypeptide chain 2-like NW_004955468 4158537 4170751 - 102021647 AGCD01051893;GBDF01099579;XM_013522294 XP_013377748 MODEL 8983683 protein-coding Dcun1d3 defective in cullin neddylation 1 domain containing 3 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein neddylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955493 153226 186824 - 102004718 AGCD01060840;AGCD01060841;GBDK01116995;XM_005405044;XM_005405045;XM_005405046;XM_005405047;XM_013504830;XM_013504831 XP_005405101;XP_005405102;XP_005405103;XP_005405104;XP_013360284;XP_013360285 MODEL 8814206 protein-coding Idh1 isocitrate dehydrogenase (NADP(+)) 1 ENCODES a protein that exhibits identical protein binding (ortholog); isocitrate dehydrogenase (NADP+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); female gonad development (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955457 6851542 6869452 + 102006982 AGCD01046855;AY463492;GBDJ01134359;XM_005396966 XP_005397023 MODEL 8933203 protein-coding Angptl7 angiopoietin like 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of vasculature development involved in avascular cornea development in camera-type eye (ortholog); regulation of extracellular matrix organization (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 2539781 2545630 - 102011011 AGCD01058999;GBCB01111542;XM_005404003 XP_005404060 MODEL 8857606 protein-coding LOC102013786 transmembrane protein 89-like NW_004958235 18 1012 + 102013786 AGCD01081631;GBDK01324497;XM_005415241 XP_005415298 MODEL 39132000 rrna 5S_rRNA 5S ribosomal RNA 8773035 ncrna LOC102008038 uncharacterized LOC102008038 NW_004955445 9004503 9006160 - 102008038 AGCD01039621;GBBH01065534;XR_262322 MODEL 9036916 protein-coding Chst2 carbohydrate sulfotransferase 2 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); sulfur compound metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955508 2821724 2824926 - 102010290 AGCD01065797;GBDF01015115;GBDK01277980;XM_005407731 XP_005407788 MODEL 9063771 protein-coding Cryl1 crystallin lambda 1 ENCODES a protein that exhibits L-gulonate 3-dehydrogenase activity (ortholog); NAD+ binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN D-glucuronate catabolic process to D-xylulose 5-phosphate (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 1A (ortholog); perinatal necrotizing enterocolitis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955497 1183707 1316720 - 102010708 AGCD01062452;AGCD01062453;AGCD01062454;AGCD01062455;GBDF01054972;GBDF01156341;XM_013505481 XP_013360935 MODEL 8740475 protein-coding LOC102015253 vomeronasal type-1 receptor 2-like NW_004955569 918627 919520 + 102015253 AGCD01074626;XM_005413514 XP_005413571 MODEL 8705101 protein-coding LOC102011438 octapeptide-repeat protein T2-like NW_004955414 22365294 22365779 - 102011438 AGCD01015455;XM_005380507 XP_005380564 MODEL 9056964 ncrna LOC102007618 uncharacterized LOC102007618 NW_004955452 2440793 2444300 - 102007618 AGCD01043895;GBDK01010271;XR_262640 MODEL 9017016 protein-coding Itgbl1 integrin subunit beta like 1 NW_004955404 9331407 9545711 - 102004665 AGCD01003368;AGCD01003369;AGCD01003370;GBDI01054502;XM_005374034 XP_005374091 MODEL 8707196 pseudo LOC102008404 RNA-binding protein with serine-rich domain 1 pseudogene NW_004955415 22507523 22528364 - 102008404 AGCD01016538;AGCD01016539 MODEL 9033286 protein-coding LOC102017561 protein FAM205CP-like NW_004955472 1277942 1292106 + 102017561 AGCD01053383;AGCD01053384;AGCD01053385;GBDF01045749;XM_005401036 XP_005401093 MODEL 9066207 protein-coding Cxcr3 C-X-C motif chemokine receptor 3 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955475 11148928 11152313 - 102010362 AGCD01055143;GBDI01290732;XM_005401676 XP_005401733 MODEL 8958003 pseudo LOC102013043 60S ribosomal protein L29 pseudogene NW_004955404 82336 85302 + 102013043 AGCD01003194 MODEL 39134134 misc_rna 7SK 7SK RNA 8882910 protein-coding LOC102009553 chromosome unknown open reading frame, human C16orf91 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955442 15820684 15821784 + 102009553 AGCD01037879;GBDF01189237;XM_005391583 XP_005391640 MODEL 8816121 protein-coding Il18 interleukin 18 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-18 receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell population proliferation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); alcoholic hepatitis (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular space (ortholog) NW_004955412 13807361 13826007 - 102027829 AGCD01012846;GBCQ01010502;XM_005378111;XM_005378112 XP_005378168;XP_005378169 MODEL 8987230 protein-coding Dgkh diacylglycerol kinase eta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); phosphatidic acid biosynthetic process (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); endosome (ortholog) NW_004955518 4104700 4263657 - 102022731 AGCD01067820;AGCD01067821;AGCD01067822;AGCD01067823;GBBH01109666;GBDK01075088;XM_005409113 XP_005409170 MODEL 8837138 ncrna LOC102024398 uncharacterized LOC102024398 NW_004955448 8864773 8881822 + 102024398 AGCD01041452;GBDF01303232;XR_262466 MODEL 8963910 protein-coding Brf1 BRF1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of mRNA stability (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiomegaly (ortholog); cerebellofaciodental syndrome (ortholog) NW_004955538 3469322 3544704 - 102005507 AGCD01071164;AGCD01071165;AGCD01071166;AGCD01071167;AGCD01071168;AGCD01071169;GBCB01026253;GBDI01136185;XM_005410860 XP_005410917 MODEL 8874762 protein-coding Hrh1 histamine receptor H1 ENCODES a protein that exhibits histamine binding (ortholog); histamine receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chemical synaptic transmission (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955429 14022332 14069931 + 102014695 AGCD01028773;AGCD01028774;AGCD01028775;GBCE01180548;XM_005387006;XM_005387007;XM_013515345 XP_005387063;XP_005387064;XP_013370799 MODEL 39134441 misc_rna 7SK 7SK RNA 8762260 protein-coding Cpa1 carboxypeptidase A1 ENCODES a protein that exhibits exopeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); INVOLVED IN protein catabolic process (ortholog); response to cadmium ion (ortholog); ASSOCIATED WITH Cadmium Poisoning (ortholog); chronic pancreatitis (ortholog); cystic fibrosis (ortholog); FOUND IN extracellular space (ortholog) NW_004955479 11011928 11017908 + 102018092 AGCD01056570;XM_005402443 XP_005402500 MODEL 8907285 protein-coding Eme2 essential meiotic structure-specific endonuclease subunit 2 ENCODES a protein that exhibits DNA endonuclease activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair (ortholog); replication fork processing (ortholog); resolution of mitotic recombination intermediates (ortholog); FOUND IN chromosome, telomeric region (ortholog); endodeoxyribonuclease complex (ortholog); nuclear replication fork (ortholog) NW_004955442 15492925 15496639 - 102020060 AGCD01037875;GBBH01185829;XM_005391517 XP_005391574 MODEL 9054138 protein-coding LOC102005516 uncharacterized LOC102005516 NW_004955442 7211768 7238684 + 102005516 AGCD01037621;XM_013517646 XP_013373100 MODEL 8977796 protein-coding Dot1l DOT1 like histone lysine methyltransferase ENCODES a protein that exhibits DNA binding (ortholog); histone H3K79 methyltransferase activity (ortholog); histone H3K79 trimethyltransferase activity (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute biphenotypic leukemia (ortholog); Colorectal Neoplasms (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 5907486 5958241 - 102017788 AGCD01062043;GBDK01147006;XM_005405917;XM_013505205;XM_013505206;XM_013505207;XM_013505208 XP_005405974;XP_013360659;XP_013360660;XP_013360661;XP_013360662 MODEL 39132247 rrna 5S_rRNA 5S ribosomal RNA 9047737 protein-coding LOC102020186 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955403 23065559 23090976 - 102020186 AGCD01002238;AGCD01002239;AGCD01002240;GBDF01016577;XM_013512884 XP_013368338 MODEL 10351740 protein-coding LOC106149911 translation initiation factor IF-2-like NW_004955457 12733466 12735613 - 106149911 AGCD01047026;GBDK01226244;XM_013520667 XP_013376121 MODEL 9043343 protein-coding LOC102020515 serine protease 29-like NW_004955690 42889 45014 - 102020515 AGCD01078063;GBBH01115238;XM_005415071 XP_005415128 MODEL 8968829 protein-coding Abhd15 abhydrolase domain containing 15 INVOLVED IN adipose tissue development (ortholog); lipid catabolic process (ortholog) NW_004955481 3686900 3691384 + 102010259 AGCD01056913;GBDJ01136395;XM_005402677 XP_005402734 MODEL 8748194 ncrna LOC102008409 uncharacterized LOC102008409 NW_004955477 11222230 11223234 + 102008409 AGCD01055725;GBBH01224847;XR_263677 MODEL 10164058 protein-coding Gpr62 G protein-coupled receptor 62 ENCODES a protein that exhibits arrestin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ligand-independent adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of calcium-mediated signaling (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog); receptor complex (ortholog) NW_004955532 3602642 3603230 + 106147238 AGCD01070288;GBCB01089709;XM_013507618 XP_013363072 MODEL 8843339 protein-coding LOC102019114 tubulin alpha-3 chain-like NW_004955442 19296034 19308163 + 102019114 AGCD01038049;AGCD01038050;AGCD01038051;GBDF01010845;GBDK01361085;XM_013517984 XP_013373438 MODEL 9062219 pseudo LOC102009153 stereocilin-like NW_004955409 22950828 22960330 - 102009153 AGCD01010048;AGCD01010049 MODEL 8870437 pseudo LOC102012683 cyclin-dependent kinase 1-like NW_004955530 1703354 1747813 + 102012683 AGCD01069897;AGCD01069898;AGCD01069899 MODEL 8865639 protein-coding LOC102011892 olfactory receptor 9G4 NW_004955511 1843967 1844917 - 102011892 AGCD01066381;XM_005407980 XP_005408037 MODEL 8957178 pseudo LOC102008791 alpha-enolase pseudogene NW_004955447 16493351 16494703 + 102008791 AGCD01041088 MODEL 9063155 protein-coding LOC102016042 histone acetyltransferase p300-like NW_004955413 26818579 26828627 + 102016042 AGCD01014479;AGCD01014480;AGCD01014481;AGCD01014482;GBCE01056132;XM_005379341 XP_005379398 MODEL 9011999 protein-coding Dcun1d4 defective in cullin neddylation 1 domain containing 4 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); FOUND IN nucleus (ortholog) NW_004955447 18562946 18641179 - 102019218 AGCD01041180;AGCD01041181;GBBH01131669;XM_005392924;XM_013518545;XM_013518546 XP_005392981;XP_013373999;XP_013374000 MODEL 8930659 pseudo LOC102015655 olfactory receptor 10AG1-like NW_004955511 5021380 5022347 - 102015655 AGCD01066542 MODEL 8838901 pseudo LOC102008040 very-long-chain 3-oxoacyl-CoA reductase pseudogene NW_004955572 223774 282157 + 102008040 AGCD01074901;AGCD01074902;AGCD01074903;AGCD01074904;AGCD01074905;AGCD01074906 MODEL 8770373 protein-coding LOC102013433 ras-related protein Rab-7a-like NW_004955429 13690345 13691311 - 102013433 AGCD01028762;GBDI01000890;XM_013515500 XP_013370954 MODEL 8750965 protein-coding Il18bp interleukin 18 binding protein ENCODES a protein that exhibits interleukin-18 binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to tumor necrosis factor (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); allergic contact dermatitis (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular space (ortholog) NW_004955414 19327828 19332577 - 102006332 AGCD01015312;GBDI01016320;XM_005380020;XM_005380021;XM_005380022 XP_005380077;XP_005380078;XP_005380079 MODEL 8703303 protein-coding Idh2 isocitrate dehydrogenase (NADP(+)) 2 ENCODES a protein that exhibits isocitrate dehydrogenase (NADP+) activity (ortholog); INVOLVED IN NADP+ biosynthetic process (ortholog); negative regulation of glial cell migration (ortholog); negative regulation of glial cell proliferation (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); peroxisome (ortholog) NW_004955416 15197611 15212919 + 102023150 AGCD01017308;AGCD01017309;GBCQ01003629;XM_005381533;XM_005381534 XP_005381590;XP_005381591 MODEL 8907125 pseudo LOC102014153 protein S100-A10-like NW_004955426 7177248 7177540 - 102014153 AGCD01026186 MODEL 8934781 ncrna LOC102015261 uncharacterized LOC102015261 NW_004955592 702280 703610 - 102015261 AGCD01076321;GBCC01027024;XR_001232540 MODEL 8823844 protein-coding Dgki diacylglycerol kinase iota ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); excitatory postsynaptic potential (ortholog); habituation (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955494 5119419 5541058 + 102006587 AGCD01061518;AGCD01061519;AGCD01061520;AGCD01061521;AGCD01061522;GBDF01250767;XM_013505028 XP_013360482 MODEL 9019979 protein-coding LOC102014555 serum amyloid A-3 protein-like NW_004955414 32910646 32914957 - 102014555 AGCD01015787;GBDF01144882;XM_005380397;XM_013512072 XP_005380454;XP_013367526 MODEL 8860755 ncrna LOC102011050 uncharacterized LOC102011050 NW_004955440 19071638 19074811 - 102011050 AGCD01036626;GBDF01013047;XR_262047 MODEL 8791025 pseudo LOC102005525 protein kinase C iota type pseudogene NW_004955445 18126528 18128715 + 102005525 AGCD01039898 MODEL 8960193 protein-coding LOC102021649 olfactory receptor 52J3-like NW_004955414 20580283 20581221 - 102021649 AGCD01015380;XM_005380062 XP_005380119 MODEL 8943519 protein-coding CUNH10orf53 chromosome unknown C10orf53 homolog NW_004955556 625327 640289 - 102028025 AGCD01073178;GBBH01141531;XM_005412566 XP_005412623 MODEL 8982394 protein-coding LOC102010292 olfactory receptor 1019 NW_004955511 1765100 1766038 + 102010292 AGCD01066379;XM_005407976 XP_005408033 MODEL 8740018 ncrna LOC102013044 uncharacterized LOC102013044 NW_004955452 10168123 10182403 + 102013044 AGCD01044270;XR_262673 MODEL 8762947 protein-coding Fbxo16 F-box protein 16 NW_004955403 50835073 50887523 - 102014201 AGCD01002974;AGCD01002975;AGCD01002976;AGCD01002977;GBDI01053534;XM_005373773;XM_005373775;XR_001234024 XP_005373830;XP_005373832 MODEL 9059877 protein-coding LOC102003708 UDP-glucuronosyltransferase 2B20-like NW_004955447 4180631 4374845 - 102003708 AGCD01040708;AGCD01040709;AGCD01040710;AGCD01040711;AGCD01040712;AGCD01040713;AGCD01040714;AGCD01040715;GBDF01017425;XM_005392805;XM_005392807;XM_005392808 XP_005392862;XP_005392864;XP_005392865 MODEL 8764323 protein-coding Emg1 EMG1 N1-specific pseudouridine methyltransferase ENCODES a protein that exhibits identical protein binding (ortholog); rRNA (pseudouridine) methyltransferase activity (ortholog); INVOLVED IN blastocyst development (ortholog); nucleologenesis (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Bowen-Conradi syndrome (ortholog); genetic disease (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955413 4563864 4570809 + 102010240 AGCD01013621;GBDJ01228048;XM_005378851 XP_005378908 MODEL 8772452 protein-coding Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 ENCODES a protein that exhibits UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity (ortholog); UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ij (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955412 20205381 20217874 - 102026090 AGCD01012996;AGCD01012997;AGCD01012998;GBDJ01278246;XM_005378303;XM_013511212 XP_005378360;XP_013366666 MODEL 39132001 rrna 5S_rRNA 5S ribosomal RNA 8814618 protein-coding Kcnd2 potassium voltage-gated channel subfamily D member 2 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); cardiac muscle cell action potential (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); early myoclonic encephalopathy (ortholog); genetic disease (ortholog); FOUND IN caveola (ortholog); dendrite (ortholog); dendritic spine (ortholog) NW_004955479 2062607 2545576 + 102020665 AGCD01056262;AGCD01056263;AGCD01056264;AGCD01056265;AGCD01056266;AGCD01056267;AGCD01056268;AGCD01056269;AGCD01056270;AGCD01056271;AGCD01056272;AGCD01056273;AGCD01056274;AGCD01056275;AGCD01056276;GBCE01108897;XM_005402450 XP_005402507 MODEL 8862525 pseudo LOC102019115 sodium-coupled neutral amino acid transporter 5 pseudogene NW_004955559 1182193 1184912 + 102019115 AGCD01073634 MODEL 8919651 protein-coding Eps8l3 EPS8 signaling adaptor L3 ENCODES a protein that exhibits actin filament binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of hair cycle (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); hypotrichosis 5 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 13261730 13277117 - 102011142 AGCD01033199;GBDI01324674;XM_005388899;XM_005388900;XM_005388901 XP_005388956;XP_005388957;XP_005388958 MODEL 8992587 protein-coding LOC102016417 charged multivesicular body protein 1b-2 NW_004955529 693587 750753 - 102016417 AGCD01069651;AGCD01069652;AGCD01069653;AGCD01069654;AGCD01069655;AGCD01069656;GBDJ01164486;XM_005410068 XP_005410125 MODEL 8946791 protein-coding Chst3 carbohydrate sulfotransferase 3 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); proteoglycan sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); peripheral nervous system axon regeneration (ortholog); response to axon injury (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Larsen syndrome (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955437 19563645 19605747 - 102003587 AGCD01034858;AGCD01034859;AGCD01034860;GBBH01057404;GBCE01122963;XM_005390020 XP_005390077 MODEL 39133545 misc_rna 7SK 7SK RNA 9015848 protein-coding Efna5 ephrin A5 ENCODES a protein that exhibits chemorepellent activity (ortholog); ephrin receptor binding (ortholog); neurotrophin TRKB receptor binding (ortholog); INVOLVED IN apoptotic process (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH anencephaly (ortholog); COVID-19 (ortholog); Reperfusion Injury (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); cell periphery (ortholog) NW_004955418 6919270 7188561 + 102021764 AGCD01018883;AGCD01018884;AGCD01018885;GBDJ01318639;XM_005382179 XP_005382236 MODEL 8909713 protein-coding LOC102013434 uncharacterized LOC102013434 NW_004955430 2174725 2183009 + 102013434 AGCD01029156;GBDK01214826;XM_005387309 XP_005387366 MODEL 8993979 protein-coding LOC102007626 keratin-associated protein 20-1-like NW_004955407 30169411 30169593 + 102007626 AGCD01007628;XM_005375642 XP_005375699 MODEL 8735017 protein-coding LOC102011439 interferon-inducible GTPase 1-like NW_004955415 3743539 3769145 + 102011439 AGCD01015950;AGCD01015951;AGCD01015952;GBCB01074015;XM_005380561;XM_013512404 XP_005380618;XP_013367858 MODEL 8834714 protein-coding Cpa2 carboxypeptidase A2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH Hypoxia (ortholog); FOUND IN extracellular region (ortholog) NW_004955479 10909466 10937720 + 102015633 AGCD01056570;GBDF01128408;XM_005402433;XM_005402435;XM_005402436 XP_005402490;XP_005402492;XP_005402493 MODEL 39134135 misc_rna 7SK 7SK RNA 8806508 pseudo LOC102010293 olfactory receptor 10AG1-like NW_004955511 885492 889414 - 102010293 AGCD01066346 MODEL 8761316 protein-coding LOC102009160 putative olfactory receptor 2W6 NW_004955465 13945042 13945998 - 102009160 AGCD01050638;XM_005399018 XP_005399075 MODEL 39134442 misc_rna 7SK 7SK RNA 8872874 protein-coding LOC102012689 keratin, type II cytoskeletal 73 NW_004955547 3011391 3021597 - 102012689 AGCD01072303;GBCB01047840;XM_005411952;XM_005411953 XP_005412009;XP_005412010 MODEL 8734899 protein-coding Hrh2 histamine receptor H2 ENCODES a protein that exhibits heterocyclic compound binding (ortholog); histamine receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); digestive tract development (ortholog); epithelial cell morphogenesis (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; cimetidine pharmacokinetics pathway; esomeprazole pharmacodynamics pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); congestive heart failure (ortholog); coronary stenosis (ortholog) NW_004955408 28186316 28225146 + 102006878 AGCD01008709;GBBH01131430;XM_005376363;XM_013509466;XR_259722 XP_005376420;XP_013364920 MODEL 8819699 protein-coding Dcun1d5 defective in cullin neddylation 1 domain containing 5 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of protein neddylation (ortholog); regulation of cell growth (ortholog); FOUND IN nucleus (ortholog); spindle (ortholog) NW_004955412 6185858 6217935 - 102019154 AGCD01012666;AGCD01012667;AGCD01012668;GBCB01021113;XM_005377993 XP_005378050 MODEL 8747668 pseudo LOC102014154 olfactory receptor 5K3-like NW_004955427 3741 6007 + 102014154 AGCD01026796 MODEL 9013475 protein-coding LOC102017562 olfactory receptor 502 NW_004955414 23671645 23672589 - 102017562 AGCD01015514;XM_013511762 XP_013367216 MODEL 8813039 protein-coding LOC102020188 cytochrome P450 2B4-like NW_004955687 15738 39465 - 102020188 AGCD01078040;AGCD01078041;AGCD01078042;AGCD01078043;AGCD01078044;GBCQ01116514;XM_005415070;XM_013510179 XP_005415127;XP_013365633 MODEL 9066639 protein-coding Abhd16a abhydrolase domain containing 16A, phospholipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN monoacylglycerol catabolic process (ortholog); phosphatidylserine catabolic process (ortholog); prostaglandin catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 86 (ortholog) NW_004955437 227407 241702 - 102020953 AGCD01034111;AGCD01034112;GBDI01070349;XM_005389356;XM_005389357;XM_013516848;XM_013516849;XM_013516850 XP_005389413;XP_005389414;XP_013372302;XP_013372303;XP_013372304 MODEL 9024185 protein-coding LOC102013790 uncharacterized LOC102013790 NW_004955452 5607257 5611877 - 102013790 AGCD01044050;GBCQ01082703;XM_013519664 XP_013375118 MODEL 8742990 protein-coding Crym crystallin mu ENCODES a protein that exhibits delta1-piperideine-2-carboxylate reductase activity (ortholog); hormone binding (ortholog); NADP binding (ortholog); INVOLVED IN mitochondrial transport (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); response to hormone (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 40 (ortholog); congestive heart failure (ortholog); Deafness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955493 443956 460041 - 102012101 AGCD01060851;GBCB01023826;GBDF01193692;XM_013504898 XP_013360352 MODEL 8721816 protein-coding LOC102013050 homeobox protein Hox-A4-like NW_004955407 36080940 36082388 - 102013050 AGCD01007755;GBCQ01047171;XM_013504651 XP_013360105 MODEL 8852351 protein-coding LOC102005530 arylacetamide deacetylase-like NW_004955448 2938773 2958946 + 102005530 AGCD01041296;AGCD01041297;AGCD01041298;AGCD01041299;GBCQ01129513;XM_005393035 XP_005393092 MODEL 9002582 protein-coding LOC102020917 olfactory receptor 5C1 NW_004955419 5153126 5154109 - 102020917 AGCD01019786;XM_013513099 XP_013368553 MODEL 8793200 protein-coding Brf2 BRF2 general transcription factor IIIB subunit ENCODES a protein that exhibits RNA polymerase III type 3 promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleolus (ortholog); transcription factor TFIIIB complex (ortholog) NW_004955463 13549571 13553946 - 102013483 AGCD01049871;GBDJ01061574;XM_013521531 XP_013376985 MODEL 8995112 protein-coding Gpr63 G protein-coupled receptor 63 FOUND IN receptor complex (ortholog) NW_004955411 22771570 22817906 - 102019152 AGCD01012097;GBCQ01010247;XM_005377788;XM_013510888 XP_005377845;XP_013366342 MODEL 8960410 ncrna LOC102008041 uncharacterized LOC102008041 NW_004955402 703396 705592 + 102008041 AGCD01000030;GBCE01120029;XR_001233535 MODEL 8987022 ncrna LOC102016044 uncharacterized LOC102016044 NW_004955469 10654826 10680135 - 102016044 AGCD01052544;GBDF01155445;XR_001236977;XR_263450 MODEL 8716919 protein-coding LOC102019119 zinc finger protein 501-like NW_004955569 1687711 1702017 + 102019119 AGCD01074676;AGCD01074677;XM_013509378 XP_013364832 MODEL 8739842 protein-coding Fbxo17 F-box protein 17 FOUND IN SCF ubiquitin ligase complex (ortholog) NW_004955468 591653 598370 + 102029729 AGCD01051718;AGCD01051719;GBCQ01039517;GBDJ01180944;XM_005399801 XP_005399858 MODEL 39132248 rrna 5S_rRNA 5S ribosomal RNA 8954500 ncrna LOC102015270 uncharacterized LOC102015270 NW_004955451 13413208 13414369 + 102015270 AGCD01043475;GBDF01266060;XR_001235973 MODEL 8924667 protein-coding Il18r1 interleukin 18 receptor 1 ENCODES a protein that exhibits interleukin-18 binding (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN interleukin-18-mediated signaling pathway (ortholog); natural killer cell activation (ortholog); negative regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN interleukin-18 receptor complex (ortholog) NW_004955470 7854995 7887810 + 102020793 AGCD01052814;AGCD01052815;GBBH01123228;XM_005400769;XM_005400770;XM_013522841 XP_005400826;XP_005400827;XP_013378295 MODEL 8994818 protein-coding Epsti1 epithelial stromal interaction 1 INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); gene expression (ortholog); ASSOCIATED WITH COVID-19 (ortholog); prostate cancer (ortholog) NW_004955518 790815 919869 - 102004964 AGCD01067745;AGCD01067746;AGCD01067747;AGCD01067748;AGCD01067749;GBDI01325591;XM_005409056;XM_013506970;XM_013506971 XP_005409113;XP_013362424;XP_013362425 MODEL 8889011 pseudo LOC102014556 RNA-binding protein 7 pseudogene NW_004955472 1752350 1754563 - 102014556 AGCD01053411 MODEL 8815049 protein-coding Cxcr4 C-X-C motif chemokine receptor 4 ENCODES a protein that exhibits actin binding (ortholog); C-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); ameboidal-type cell migration (ortholog); aorta development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; hypoxia inducible factor pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bone Metastasis (ortholog); Breast Neoplasms (ortholog); FOUND IN cell leading edge (ortholog); cell surface (ortholog); cell-cell junction (ortholog) NW_004955440 3456165 3460024 - 102011479 AGCD01036242;GBBH01062692;XM_005390768 XP_005390825 MODEL 9049584 pseudo LOC102008412 transmembrane protein 208 pseudogene NW_004955417 13153802 13154322 + 102008412 AGCD01018172 MODEL 9015187 protein-coding LOC102013435 endogenous retrovirus group K member 18 Pol protein-like NW_004955511 4811817 4815683 + 102013435 AGCD01066527;XM_013506412 XP_013361866 MODEL 8834753 protein-coding Dgkk diacylglycerol kinase kappa ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); intracellular signal transduction (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH hypospadias (ortholog); FOUND IN plasma membrane (ortholog) NW_004955543 1468328 1601101 - 102017385 AGCD01071623;AGCD01071624;AGCD01071625;XM_005411355 XP_005411412 MODEL 8833003 ncrna LOC102011440 uncharacterized LOC102011440 NW_004955476 3980903 3992756 - 102011440 AGCD01055264;GBDF01249578;XR_263619 MODEL 9004906 protein-coding Angptl8 angiopoietin like 8 INVOLVED IN cell maturation (ortholog); fat cell differentiation (ortholog); glucose metabolic process (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 2205424 2207611 + 102016286 AGCD01061753;GBDJ01401913;XM_005405640;XM_013505180 XP_005405697;XP_013360634 MODEL 9017215 ncrna LOC102014156 uncharacterized LOC102014156 NW_004955511 2259218 2268513 + 102014156 AGCD01066396;GBDF01178034;XR_264416 MODEL 9010588 pseudo LOC102021653 protein TEX261 pseudogene NW_004955473 37362 38419 + 102021653 AGCD01053831 MODEL 8922879 protein-coding LOC102011894 olfactory receptor 5AS1-like NW_004955511 949994 950932 + 102011894 AGCD01066346;XM_005408219 XP_005408276 MODEL 9056905 protein-coding CUNH10orf62 chromosome unknown C10orf62 homolog NW_004955507 3691334 3692636 + 102028664 AGCD01065632;GBDK01273929;XM_005407615 XP_005407672 MODEL 8953506 protein-coding LOC102007627 ral guanine nucleotide dissociation stimulator-like NW_004955407 35377264 35380004 - 102007627 AGCD01007740;GBDF01084243;XM_005375725;XM_013504566 XP_005375782;XP_013360020 MODEL 8782942 protein-coding Efnb1 ephrin B1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); embryonic pattern specification (ortholog); nervous system development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH craniofrontonasal syndrome (ortholog); craniosynostosis (ortholog); dysostosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955475 8360504 8372431 + 102015627 AGCD01055040;GBCQ01070936;XM_005401594 XP_005401651 MODEL 8950651 pseudo LOC102008792 F-box/LRR-repeat protein 20 pseudogene NW_004955447 14849540 14851022 - 102008792 AGCD01041022 MODEL 8990238 protein-coding LOC102020189 voltage-dependent P/Q-type calcium channel subunit alpha-1A-like NW_004955864 3995 10113 - 102020189 AGCD01078519;GBDJ01287614;XM_013510201 XP_013365655 MODEL 8861623 ncrna LOC102016419 uncharacterized LOC102016419 NW_004955534 1133388 1134648 - 102016419 AGCD01070487;GBDF01212577;XR_264761 MODEL 8718651 protein-coding LOC102015656 zinc finger protein 709-like NW_004955432 4541720 4566319 + 102015656 AGCD01030725;AGCD01030726;GBDF01013752;XM_013515929;XM_013515931 XP_013371383;XP_013371385 MODEL 8812655 protein-coding LOC102009554 kallikrein-4-like NW_004955558 1976188 2013876 + 102009554 AGCD01073492;AGCD01073493;AGCD01073494;AGCD01073495;AGCD01073496;XM_013508850 XP_013364304 MODEL 10318582 ncrna LOC106149912 uncharacterized LOC106149912 NW_004955457 358067 371560 - 106149912 AGCD01046709;AGCD01046710;AGCD01046711;XR_001236377 MODEL 39133580 misc_rna 7SK 7SK RNA 8863969 protein-coding LOC102011051 tetratricopeptide repeat protein 39B-like NW_004955441 6423398 6437402 + 102011051 AGCD01036920;GBDF01008292;XM_005390888 XP_005390945 MODEL 8828778 protein-coding Fbxo2 F-box protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); carbohydrate binding (ortholog); denatured protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955486 2212001 2217260 + 102009844 AGCD01058995;GBDI01225872;GBDJ01313428;XM_005404000 XP_005404057 MODEL 39132002 rrna 5S_rRNA 5S ribosomal RNA 39134001 misc_rna 7SK 7SK RNA 8996838 protein-coding Dpcd deleted in primary ciliary dyskinesia homolog (mouse) INVOLVED IN determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); primary ciliary dyskinesia (ortholog) NW_004955485 8670261 8691545 - 102026222 AGCD01058724;GBDK01142047;XM_005403872;XM_005403873 XP_005403929;XP_005403930 MODEL 8730871 ncrna LOC102013053 uncharacterized LOC102013053 NW_004955456 10144425 10145561 + 102013053 AGCD01046518;GBDF01025520;XR_262893 MODEL 8758225 protein-coding LOC102013792 uncharacterized LOC102013792 NW_004955405 39039227 39041671 - 102013792 AGCD01005495;GBDK01100241;XM_005374598;XM_013518951 XP_005374655;XP_013374405 MODEL 9037993 protein-coding Kcnd3 potassium voltage-gated channel subfamily D member 3 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cardiac muscle cell action potential involved in contraction (ortholog); cell communication involved in cardiac conduction (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Brugada syndrome (ortholog); Brugada syndrome 9 (ortholog); FOUND IN caveola (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) NW_004955435 15227386 15431136 - 102029112 AGCD01033264;AGCD01033265;AGCD01033266;AGCD01033267;AGCD01033268;AGCD01033269;AGCD01033270;GBCQ01171049;XM_005388954 XP_005389011 MODEL 39134443 misc_rna 7SK 7SK RNA 8824931 ncrna LOC102020517 uncharacterized LOC102020517 NW_004955403 47004641 47045570 + 102020517 AGCD01002873;AGCD01002874;GBDJ01189358;XR_001233928;XR_001233929;XR_001233930 MODEL 9060759 protein-coding LOC102010294 chromosome unknown open reading frame, human C4orf50 NW_004955514 4112935 4206895 + 102010294 AGCD01067127;AGCD01067128;GBDF01183618;XM_005408860 XP_005408917 MODEL 8751759 pseudo LOC102012691 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955551 615007 616795 + 102012691 AGCD01072666 MODEL 8889150 protein-coding LOC102020918 arylacetamide deacetylase-like 4 NW_004955486 810084 821062 - 102020918 AGCD01058891;AGCD01058892;XM_005403939 XP_005403996 MODEL 8799841 protein-coding Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ENCODES a protein that exhibits isocitrate dehydrogenase (NAD+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH fundus dystrophy (ortholog); osteoarthritis (ortholog); retinitis pigmentosa (ortholog); FOUND IN isocitrate dehydrogenase complex (NAD+) (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955450 685905 703593 + 102007832 AGCD01042342;AGCD01042343;GBDF01081591;XM_005393440 XP_005393497 MODEL 8754915 pseudo LOC102016048 olfactory receptor 2AT4-like NW_004955414 16709568 16712630 + 102016048 AGCD01015222 MODEL 9044945 protein-coding Gpr65 G protein-coupled receptor 65 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to acidic pH (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH ulcerative colitis (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) NW_004955438 10724069 10730868 + 102004423 AGCD01035216;GBDI01162205;XM_005390250 XP_005390307 MODEL 8845654 protein-coding Chst4 carbohydrate sulfotransferase 4 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN leukocyte tethering or rolling (ortholog); N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN trans-Golgi network (ortholog) NW_004955484 4234677 4245092 + 102010590 AGCD01058206;GBBH01126644;XM_005403503;XM_005403504;XM_005403507;XM_013503843;XM_013503844;XM_013503845 XP_005403560;XP_005403561;XP_005403564;XP_013359297;XP_013359298;XP_013359299 MODEL 8727744 pseudo LOC102019123 arylacetamide deacetylase-like NW_004955448 3049316 3050504 + 102019123 AGCD01041301 MODEL 39132249 rrna 5S_rRNA 5S ribosomal RNA 9062423 pseudo LOC102017567 chromobox protein homolog 5 pseudogene NW_004955417 26988906 26990379 + 102017567 AGCD01018530 MODEL 10186628 ncrna LOC106149913 uncharacterized LOC106149913 NW_004955457 2828070 2833723 + 106149913 AGCD01046751;XR_001236378 MODEL 8721472 protein-coding LOC102024400 olfactory receptor 15-like NW_004955581 637852 638793 - 102024400 AGCD01075684;XM_013509726 XP_013365180 MODEL 9055514 protein-coding Hrh3 histamine receptor H3 ENCODES a protein that exhibits amine binding (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN cAMP metabolic process (ortholog); cognition (ortholog); drinking behavior (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); Experimental Seizures (ortholog); gastric ulcer (ortholog) NW_004955528 1819247 1826707 + 102003480 AGCD01069572;AGCD01069573;GBDF01069327;XM_013507434 XP_013362888 MODEL 8853253 ncrna LOC102003710 uncharacterized LOC102003710 NW_004955575 880017 890569 + 102003710 AGCD01075230;GBDF01020002;XR_265070 MODEL 9051378 ncrna LOC102014561 uncharacterized LOC102014561 NW_004955416 28597114 28642344 - 102014561 AGCD01017633;AGCD01017634;GBDF01160494;XR_001233341;XR_260435 MODEL 8902395 protein-coding Cpa3 carboxypeptidase A3 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN angiotensin maturation (ortholog); regulation of angiotensin levels in blood (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular region (ortholog) NW_004955474 8602958 8626436 - 102015508 AGCD01054555;GBDF01073529;XM_005401423 XP_005401480 MODEL 9029266 protein-coding Dgkq diacylglycerol kinase theta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to bile acid (ortholog); diacylglycerol metabolic process (ortholog); ASSOCIATED WITH Sjogren's syndrome (ortholog); Usher syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955514 452548 475240 - 102004415 AGCD01067010;AGCD01067011;GBCB01099242;XM_005408848 XP_005408905 MODEL 8801654 protein-coding Itih1 inter-alpha-trypsin inhibitor heavy chain 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Liver Neoplasms (ortholog); Osteoarthritis, Hip (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955430 2738128 2751007 + 102025711 AGCD01029180;GBDI01248188;XM_005387351 XP_005387408 MODEL 8885347 ncrna LOC102005533 uncharacterized LOC102005533 NW_004955402 4830997 4925604 + 102005533 AGCD01000128;AGCD01000129;GBDF01177440;XR_001235012;XR_259028 MODEL 8708859 protein-coding Emid1 EMI domain containing 1 FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); Golgi apparatus (ortholog) NW_004955455 3514350 3564584 + 102027713 AGCD01045632;AGCD01045633;AGCD01045634;AGCD01045635;AGCD01045636;GBBH01172676;GBDI01170247;XM_005396178;XM_005396179;XM_005396180;XM_005396181;XM_005396182;XM_005396188 XP_005396235;XP_005396236;XP_005396237;XP_005396238;XP_005396239;XP_005396245 MODEL 8866336 ncrna LOC102008048 uncharacterized LOC102008048 NW_004955403 45870106 45876316 - 102008048 AGCD01002838;GBDJ01116277;XR_259242 MODEL 9066181 ncrna LOC102007630 uncharacterized LOC102007630 NW_004955457 12213711 12215439 + 102007630 AGCD01047004;GBCQ01183768;XR_262943 MODEL 8968002 protein-coding CUNH10orf71 chromosome unknown C10orf71 homolog INVOLVED IN positive regulation of calcineurin-NFAT signaling cascade (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN Z disc (ortholog) NW_004955556 894707 917196 - 102003387 AGCD01073179;GBCB01007197;XM_005412570;XM_005412571;XM_005412572 XP_005412627;XP_005412628;XP_005412629 MODEL 8773901 protein-coding LOC102008793 collagen alpha-2(I) chain NW_004955580 161170 172197 - 102008793 AGCD01075587;AGCD01075588;AGCD01075589;GBDF01080395;XM_005414114 XP_005414171 MODEL 8835268 protein-coding LOC102009161 lupus La protein-like NW_004955412 27605630 27607235 - 102009161 AGCD01013242;GBBH01116715;GBCC01021705;XM_005378521 XP_005378578 MODEL 8707347 ncrna LOC102015660 uncharacterized LOC102015660 NW_004955434 17409506 17447739 + 102015660 AGCD01032535;AGCD01032536;AGCD01032537;GBDJ01404981;XR_001234793;XR_001234794;XR_001234795;XR_001234796;XR_261625 MODEL 8713810 protein-coding Dcx doublecortin ENCODES a protein that exhibits microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN axon extension (ortholog); brain development (ortholog); central nervous system projection neuron axonogenesis (ortholog); ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); alcohol use disorder (ortholog); brain infarction (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955490 4354307 4469055 + 102004827 AGCD01060187;AGCD01060188;XM_005404644;XM_005404645 XP_005404701;XP_005404702 MODEL 39134444 misc_rna 7SK 7SK RNA 9015155 ncrna LOC102009555 uncharacterized LOC102009555 NW_004955443 5716273 5723524 + 102009555 AGCD01038243;GBDF01305708;XR_001235476;XR_262177 MODEL 8752892 pseudo LOC102008417 serine/threonine-protein kinase Chk1 pseudogene NW_004955484 9066985 9070701 + 102008417 AGCD01058404 MODEL 8822599 ncrna LOC102011444 uncharacterized LOC102011444 NW_004955417 7040994 7068069 - 102011444 AGCD01017997;GBDF01260563;XR_260460 MODEL 8917663 protein-coding Anhx anomalous homeobox NW_004955482 3083 9557 - 102021662 AGCD01057159;XM_005403232 XP_005403289 MODEL 8817094 protein-coding Epx eosinophil peroxidase ENCODES a protein that exhibits peroxidase activity (ortholog); INVOLVED IN defense response to nematode (ortholog); eosinophil migration (ortholog); negative regulation of interleukin-10 production (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Eosinophilic Asthma (ortholog) NW_004955451 4818809 4828913 - 102029463 AGCD01043142;GBBH01198007;XM_005394034;XM_005394035 XP_005394091;XP_005394092 MODEL 8900029 ncrna LOC102011056 uncharacterized LOC102011056 NW_004955443 9637905 9651098 + 102011056 AGCD01038358;GBDF01014410;XR_262200;XR_262201 MODEL 9018750 ncrna LOC102011899 uncharacterized LOC102011899 NW_004955517 51555 54459 - 102011899 AGCD01067565;GBDK01097081;XR_264538 MODEL 8827706 protein-coding Cryz crystallin zeta ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR binding (ortholog); NADH binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); protein homotetramerization (ortholog); xenobiotic catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955423 17952783 17975982 + 102026883 AGCD01023866;GBDF01160339;XM_005385231;XM_005385232;XM_005385233 XP_005385288;XP_005385289;XP_005385290 MODEL 8855012 protein-coding Bri3 brain protein I3 ENCODES a protein that exhibits identical protein binding (ortholog) NW_004955460 14165874 14174464 + 102029053 AGCD01048742;GBDF01045177;GBDI01000286;XM_013521167 XP_013376621 MODEL 8751301 protein-coding LOC102021665 complement C5 NW_004955419 6999448 7096842 + 102021665 AGCD01019868;AGCD01019869;AGCD01019870;AGCD01019871;AGCD01019872;AGCD01019873;GBDK01083338;XM_005382580 XP_005382637 MODEL 8742370 protein-coding LOC102020191 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2-like NW_004956420 3401 4413 - 102020191 AGCD01079568;GBDI01258722;GBDK01028378;XM_013510226 XP_013365680 MODEL 8821253 pseudo LOC102013054 nuclear inhibitor of protein phosphatase 1-like NW_004955407 28446035 28447589 + 102013054 AGCD01007586 MODEL 8745595 protein-coding Cpa4 carboxypeptidase A4 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN hormone catabolic process (ortholog); peptide catabolic process (ortholog); FOUND IN extracellular space (ortholog) NW_004955479 10940269 10963629 + 102016592 AGCD01056570;GBDI01032686;XM_005402437 XP_005402494 MODEL 39133582 misc_rna 7SK 7SK RNA 8713441 pseudo LOC102013793 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955405 1278334 1278982 + 102013793 AGCD01004601 MODEL 8796878 ncrna LOC102013440 uncharacterized LOC102013440 NW_004955514 2930944 2934018 - 102013440 AGCD01067090;GBDF01225338;XR_264504 MODEL 8797242 protein-coding Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); potassium channel regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cardiac muscle cell action potential involved in contraction (ortholog); cellular response to acidic pH (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955407 33807581 33814356 - 102027489 AGCD01007709;GBDI01027346;XM_005375703 XP_005375760 MODEL 10309212 protein-coding Abhd16b abhydrolase domain containing 16B ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955528 391749 395181 - 106146221 AGCD01069526;GBDF01083654;XM_013507489 XP_013362943 MODEL 8963272 protein-coding Dpep1 dipeptidase 1 ENCODES a protein that exhibits beta-lactamase activity (ortholog); dipeptidase activity (ortholog); GPI anchor binding (ortholog); INVOLVED IN antibiotic metabolic process (ortholog); cellular response to calcium ion (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH Chemically-Induced Disorders (ortholog); hepatoblastoma (ortholog); osteoarthritis (ortholog); FOUND IN apical part of cell (ortholog); cell junction (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955541 3204421 3215514 + 102010199 AGCD01071440;GBDF01219991;XM_005411038;XM_005411039;XM_005411041;XM_005411042;XM_005411043;XM_005411044;XM_005411045;XM_013507943;XM_013507944;XM_013507945 XP_005411095;XP_005411096;XP_005411098;XP_005411099;XP_005411100;XP_005411101;XP_005411102;XP_013363397;XP_013363398;XP_013363399 MODEL 9018245 ncrna LOC102020930 uncharacterized LOC102020930 NW_004955423 24576706 24593183 + 102020930 AGCD01024037;GBDF01260322;XR_260991 MODEL 8714761 protein-coding LOC102014157 olfactory receptor 8H1-like NW_004955511 1057094 1058032 + 102014157 AGCD01066354;XM_013506419 XP_013361873 MODEL 8792603 protein-coding Cxcr5 C-X-C motif chemokine receptor 5 INVOLVED IN leukocyte chemotaxis (ortholog); lymph node development (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH primary biliary cholangitis (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955412 20016768 20031635 + 102020318 AGCD01012992;GBBH01107031;XM_005378282 XP_005378339 MODEL 39134445 misc_rna 7SK 7SK RNA 9014819 ncrna LOC102019125 uncharacterized LOC102019125 NW_004955402 25007914 25012011 + 102019125 AGCD01000650;GBDF01105810;XR_259066 MODEL 39132003 rrna 5S_rRNA 5S ribosomal RNA 8979075 protein-coding LOC102003711 protein FAM170A-like NW_004955582 198318 205621 + 102003711 AGCD01075748;AGCD01075749;GBDF01050789;XM_005414281;XM_005414282 XP_005414338;XP_005414339 MODEL 8998923 protein-coding Efnb2 ephrin B2 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adherens junction organization (ortholog); angiogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH colon carcinoma (ortholog); colorectal carcinoma (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955404 5000906 5030068 + 102016557 AGCD01003303;GBDJ01130272;XM_013516817 XP_013372271 MODEL 8833408 protein-coding Chst7 carbohydrate sulfotransferase 7 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); N-acetylglucosamine metabolic process (ortholog); sulfur compound metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955516 1435972 1466249 - 102026462 AGCD01067426;AGCD01067427;GBCB01008873;XM_005408977;XM_005408978;XM_005408979;XR_264531 XP_005409034;XP_005409035;XP_005409036 MODEL 9026608 pseudo LOC102024405 60S ribosomal protein L39 pseudogene NW_004955402 38749901 38750123 + 102024405 AGCD01000967;XM_005372945 MODEL 8988403 protein-coding LOC102016421 uncharacterized LOC102016421 NW_004955538 2155703 2159116 - 102016421 AGCD01071102;GBDF01120673;XM_013507821 XP_013363275 MODEL 8903148 protein-coding Fbxo21 F-box protein 21 INVOLVED IN apoptotic process (ortholog); cytokine-mediated signaling pathway (ortholog); ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Weight Gain (ortholog) NW_004955455 13989149 14028309 + 102022567 AGCD01046080;AGCD01046081;GBBH01207617;XM_005396545;XM_005396546 XP_005396602;XP_005396603 MODEL 8822490 pseudo LOC102008050 mitochondrial import receptor subunit TOM22 homolog pseudogene NW_004955452 2641703 2642225 - 102008050 AGCD01043901 MODEL 8967359 protein-coding Itih2 inter-alpha-trypsin inhibitor heavy chain 2 ENCODES a protein that exhibits hyaluronic acid binding (ortholog) NW_004955421 24149081 24189810 + 102008003 AGCD01022208;AGCD01022209;GBDF01081930;XM_005383873;XM_005383874 XP_005383930;XP_005383931 MODEL 9068130 ncrna LOC102015271 uncharacterized LOC102015271 NW_004955403 46127900 46135618 + 102015271 AGCD01002850;GBBH01170811;XR_001233899;XR_259244 MODEL 9043370 protein-coding Il18rap interleukin 18 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); Bronchial Hyperreactivity (ortholog); inflammatory bowel disease (ortholog); FOUND IN interleukin-18 receptor complex (ortholog) NW_004955470 7894900 7923653 + 102021331 AGCD01052816;GBDI01059444;XM_005400771;XM_005400772;XM_013522677 XP_005400828;XP_005400829;XP_013378131 MODEL 9014299 protein-coding LOC102010296 uncharacterized LOC102010296 NW_004955516 3709709 3720497 + 102010296 AGCD01067503;AGCD01067504;GBCE01103721;XM_005409002 XP_005409059 MODEL 8839052 ncrna LOC102016052 uncharacterized LOC102016052 NW_004955478 15350 16498 + 102016052 AGCD01055729;GBDK01097379;XR_263679 MODEL 8845780 protein-coding LOC102013056 olfactory receptor 6C74 NW_004955458 2437549 2438499 - 102013056 AGCD01047233;XM_005397240 XP_005397297 MODEL 10163428 ncrna LOC106149914 uncharacterized LOC106149914 NW_004955457 351907 353877 + 106149914 AGCD01046708;XR_001236379 MODEL 9060024 ncrna LOC102009556 uncharacterized LOC102009556 NW_004955444 690141 694617 - 102009556 AGCD01038682;GBCE01026109;XR_262224;XR_262225 MODEL 39134002 misc_rna 7SK 7SK RNA 9058612 protein-coding Hrh4 histamine receptor H4 ENCODES a protein that exhibits histamine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); COVID-19 (ortholog); Pruritus (ortholog); FOUND IN membrane (ortholog) NW_004955402 12809164 12826952 + 102011067 AGCD01000404;AGCD01000405;GBDK01207919;XM_005372722;XM_005372724;XM_013505130;XR_259052 XP_005372779;XP_005372781;XP_013360584 MODEL 8952183 pseudo LOC102011905 dnaJ homolog subfamily A member 1 pseudogene NW_004955526 2793294 2822895 + 102011905 AGCD01069321 MODEL 8813799 pseudo LOC102020519 histidine triad nucleotide-binding protein 2, mitochondrial pseudogene NW_004955403 42797974 42798458 + 102020519 AGCD01002761 MODEL 9049082 ncrna LOC102008798 uncharacterized LOC102008798 NW_004955592 168536 235179 + 102008798 AGCD01076300;AGCD01076301;GBDF01077466;XR_001232541;XR_001232542;XR_265134;XR_265135;XR_265136 MODEL 8758766 protein-coding LOC102005537 protein S100-A15A NW_004955592 62455 67295 + 102005537 AGCD01076300;XM_005414601 XP_005414658 MODEL 8981091 protein-coding Emilin1 elastin microfibril interfacer 1 ENCODES a protein that exhibits extracellular matrix constituent conferring elasticity (ortholog); identical protein binding (ortholog); integrin binding involved in cell-matrix adhesion (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cell adhesion mediated by integrin (ortholog); cell migration (ortholog); ASSOCIATED WITH arterial tortuosity syndrome (ortholog); ARTERIAL TORTUOSITY-BONE FRAGILITY SYNDROME (ortholog); autosomal dominant distal hereditary motor neuronopathy 10 (ortholog); FOUND IN EMILIN complex (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955469 9049666 9057692 + 102019051 AGCD01052488;GBCE01031448;XM_005400450 XP_005400507 MODEL 8972225 protein-coding LOC102008052 endogenous retrovirus group K member 21 Rec protein-like NW_004955405 858916 862820 + 102008052 AGCD01004588;GBDF01277735;XM_005374249 XP_005374306 MODEL 39132250 rrna 5S_rRNA 5S ribosomal RNA 8998908 protein-coding Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Disease Progression (ortholog); fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN isocitrate dehydrogenase complex (NAD+) (ortholog); mitochondrion (ortholog) NW_004955415 13642804 13649023 - 102016262 AGCD01016263;GBCB01001615;XM_013512289;XM_013512290;XR_001233226;XR_001233227 XP_013367743;XP_013367744 MODEL 8907164 protein-coding Cpa5 carboxypeptidase A5 ENCODES a protein that exhibits peptidase activity (ortholog) NW_004955479 10981724 11002572 + 102017125 AGCD01056570;GBDF01045820;XM_005402439;XM_005402440;XM_005402441;XM_005402442 XP_005402496;XP_005402497;XP_005402498;XP_005402499 MODEL 8702257 protein-coding Dda1 DET1 and DDB1 associated 1 INVOLVED IN protein polyubiquitination (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955524 912752 920714 - 102007049 AGCD01068725;AGCD01068726;GBDK01139764;XM_005409525;XM_005409526;XM_005409527;XM_013507242;XM_013507243;XM_013507244;XM_013507245;XM_013507246 XP_005409582;XP_005409583;XP_005409584;XP_013362696;XP_013362697;XP_013362698;XP_013362699;XP_013362700 MODEL 8891533 protein-coding LOC102013443 pancreatic alpha-amylase NW_004955435 8083712 8090769 - 102013443 AGCD01032994;GBDF01171554;XM_005388816;XM_005388817;XM_005388818 XP_005388873;XP_005388874;XP_005388875 MODEL 8809920 pseudo LOC102014562 40S ribosomal protein S15 pseudogene NW_004955416 15185783 15187715 - 102014562 AGCD01017307 MODEL 39134276 misc_rna 7SK 7SK RNA 8740023 protein-coding LOC102013799 chromosome unknown open reading frame, human C21orf91 INVOLVED IN cerebral cortex neuron differentiation (ortholog); positive regulation of dendritic spine development (ortholog) NW_004955407 19093931 19124997 - 102013799 AGCD01007294;AGCD01007295;GBDJ01043497;XM_005375581 XP_005375638 MODEL 9055009 pseudo LOC102011060 MICOS complex subunit MIC27 pseudogene NW_004955444 6968368 6969142 - 102011060 AGCD01038884 MODEL 8781760 protein-coding Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cardiac muscle cell action potential involved in contraction (ortholog); cellular response to xenobiotic stimulus (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiac Arrhythmias (ortholog); coronary artery disease (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955407 33734969 33736609 + 102026503 AGCD01007707;GBDK01361078;XM_005375700 XP_005375757 MODEL 39134003 misc_rna 7SK 7SK RNA 9018986 protein-coding Epyc epiphycan INVOLVED IN articular cartilage development (ortholog); bone development (ortholog); sensory perception of sound (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955405 28182890 28212864 - 102018797 AGCD01005233;GBCE01000127;XM_005374447 XP_005374504 MODEL 8970043 ncrna LOC102007631 uncharacterized LOC102007631 NW_004955408 21175728 21206688 - 102007631 AGCD01008553;GBDF01153618;XR_001232359;XR_001232366;XR_259693;XR_259694;XR_259695 MODEL 8814119 pseudo LOC102003712 N-alpha-acetyltransferase 50 pseudogene NW_004955402 792233 792986 - 102003712 AGCD01000033 MODEL 9058839 protein-coding Cryzl1 crystallin zeta like 1 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN early endosome (ortholog) NW_004955407 33016289 33055495 - 102023003 AGCD01007694;AGCD01007695;GBCQ01152292;XM_005375689;XM_013504327 XP_005375746;XP_013359781 MODEL 8824290 pseudo LOC102020193 prefoldin subunit 4 pseudogene NW_004955403 39947439 39960187 + 102020193 AGCD01002652;XM_005373866 MODEL 8991053 pseudo LOC102017571 zinc finger protein 23 pseudogene NW_004955418 4269959 4271996 + 102017571 AGCD01018816 MODEL 9021599 protein-coding Bri3bp BRI3 binding protein FOUND IN mitochondrion (ortholog) NW_004955482 4710937 4716534 - 102026528 AGCD01057306;GBCQ01176014;GBDF01123268;XM_013503743 XP_013359197 MODEL 8872922 protein-coding LOC102015275 phospholipase A2, membrane associated-like NW_004955452 611395 613020 - 102015275 AGCD01043820;XM_005394668 XP_005394725 MODEL 8894665 pseudo LOC102009162 Krueppel-like factor 3 pseudogene NW_004955412 32434354 32435058 - 102009162 AGCD01013355;XR_260036 MODEL 8858709 pseudo LOC102015663 periphilin-1 pseudogene NW_004955529 437395 439074 - 102015663 AGCD01069635;XM_005410064;XM_005410065;XM_005410066 MODEL 8958151 protein-coding Gpr68 G protein-coupled receptor 68 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to acidic pH (ortholog); cellular response to pH (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 2A6 (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955438 13553770 13575093 - 102017506 AGCD01035292;AGCD01035293;AGCD01035294;GBCE01179739;XM_005390296;XM_005390297;XM_005390298;XM_005390300;XM_005390301;XM_005390303;XM_013517223;XM_013517224 XP_005390353;XP_005390354;XP_005390355;XP_005390357;XP_005390358;XP_005390360;XP_013372677;XP_013372678 MODEL 8840067 protein-coding Fbxo22 F-box protein 22 INVOLVED IN cellular response to starvation (ortholog); nucleocytoplasmic transport (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Tayoun-Maawali syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955450 1152383 1171257 + 102014725 AGCD01042355;GBDF01155484;XM_005393464 XP_005393521 MODEL 8832308 protein-coding LOC102011445 translation initiation factor IF-2-like NW_004955418 844476 848795 + 102011445 AGCD01018691;GBDF01112395;XM_005382047 XP_005382104 MODEL 8739150 protein-coding Il19 interleukin 19 INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway (ortholog); negative regulation of low-density lipoprotein particle clearance (ortholog); positive regulation of apoptotic signaling pathway (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH asthma (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chronic kidney disease (ortholog) NW_004955406 42376102 42384902 + 102022669 AGCD01006704;AGCD01006705;XM_013502759;XM_013502762 XP_013358213;XP_013358216 MODEL 8709926 protein-coding LOC102014160 zinc finger protein 709-like NW_004955432 4036003 4057987 - 102014160 AGCD01030688;AGCD01030689;GBDI01208211;XM_013515926 XP_013371380 MODEL 8871171 pseudo LOC102008418 40S ribosomal protein S13 pseudogene NW_004955485 7336794 7337638 - 102008418 AGCD01058654;XM_005403816 MODEL 8999109 protein-coding Abhd17a abhydrolase domain containing 17A, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); negative regulation of protein localization to microtubule (ortholog); positive regulation of protein localization to endosome (ortholog); FOUND IN endosome membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955495 6159314 6167429 + 102025024 AGCD01062055;GBDI01062611;XM_005405944;XM_013505273 XP_005406001;XP_013360727 MODEL 8700387 protein-coding Dgkz diacylglycerol kinase zeta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); enzyme inhibitor activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Hypoxia (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) NW_004955422 1658237 1687000 - 102009511 AGCD01022468;AGCD01022469;GBDI01006776;XM_005384031;XM_005384033;XM_005384035;XM_005384038;XM_013514024 XP_005384088;XP_005384090;XP_005384092;XP_005384095;XP_013369478 MODEL 8767813 protein-coding Emilin2 elastin microfibril interfacer 2 INVOLVED IN negative regulation of cell migration (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN extracellular region (ortholog) NW_004955402 7507674 7519978 - 102016008 AGCD01000175;AGCD01000176;GBDF01025495;GBDI01175041;XM_013518815 XP_013374269 MODEL 8785946 protein-coding LOC102021666 uncharacterized LOC102021666 NW_004955419 27619572 27626303 + 102021666 AGCD01020444;GBCE01016841;XM_013513108 XP_013368562 MODEL 8959579 protein-coding CUNH10orf88 chromosome unknown C10orf88 homolog ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955477 1127067 1141360 - 102024111 AGCD01055503;GBDI01055762;XM_005401951 XP_005402008 MODEL 8970793 protein-coding Ank1 ankyrin 1 ENCODES a protein that exhibits ATPase binding (ortholog); cytoskeletal anchor activity (ortholog); enzyme binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); erythrocyte development (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); ASSOCIATED WITH anemia (ortholog); bone development disease (ortholog); genetic disease (ortholog); FOUND IN A band (ortholog); ankyrin-1 complex (ortholog); axolemma (ortholog) NW_004955536 1049325 1237943 + 102012241 AGCD01070748;AGCD01070749;AGCD01070750;AGCD01070751;GBDF01253297;XM_005410521;XM_005410522;XM_005410523;XM_013507729;XM_013507730;XM_013507731;XR_001232062 XP_005410578;XP_005410579;XP_005410580;XP_013363183;XP_013363184;XP_013363185 MODEL 9067218 protein-coding LOC102024406 histone H3-like centromeric protein CSE4 NW_004955589 479165 495697 - 102024406 AGCD01076173;XM_005414584 XP_005414641 MODEL 9020192 protein-coding Dpf1 double PHD fingers 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN nervous system development (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; FOUND IN nBAF complex (ortholog) NW_004955468 1195152 1209774 + 102021114 AGCD01051762;GBDF01305787;XM_005399869;XM_005399870;XM_005399871;XM_005399872;XM_005399875;XM_005399878;XM_013522421;XM_013522422;XM_013522423;XM_013522424 XP_005399926;XP_005399927;XP_005399928;XP_005399929;XP_005399932;XP_005399935;XP_013377875;XP_013377876;XP_013377877;XP_013377878 MODEL 8905107 pseudo LOC102011909 ATP synthase F(0) complex subunit C2, mitochondrial pseudogene NW_004955538 2556303 2557233 + 102011909 AGCD01071128 MODEL 8939119 protein-coding Itih3 inter-alpha-trypsin inhibitor heavy chain 3 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955430 2753974 2767436 + 102026030 AGCD01029180;GBDF01106227;XM_005387352 XP_005387409 MODEL 9031384 pseudo LOC102020523 ubiquitin carboxyl-terminal hydrolase isozyme L3 pseudogene NW_004955405 14169274 14176291 + 102020523 AGCD01004919 MODEL 9038190 ncrna LOC102008799 uncharacterized LOC102008799 NW_004955402 56514337 56517087 + 102008799 AGCD01001468;GBDF01212633;XR_259105 MODEL 8754221 ncrna LOC102016053 uncharacterized LOC102016053 NW_004955479 5234253 5262086 + 102016053 AGCD01056341;GBCE01048213;XR_263733;XR_263734 MODEL 8899522 protein-coding Eqtn equatorin INVOLVED IN acrosomal vesicle exocytosis (ortholog); endocytosis (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955472 7554243 7563620 + 102024109 AGCD01053624;GBDF01050220;XM_005401145 XP_005401202 MODEL 8880648 protein-coding LOC102013057 interferon-inducible GTPase 1-like NW_004955408 2302552 2307297 - 102013057 AGCD01008003;GBDJ01001366;XM_013507347 XP_013362801 MODEL 10309232 ncrna LOC106149915 uncharacterized LOC106149915 NW_004955457 14777601 14826076 + 106149915 AGCD01047083;AGCD01047084;XR_001236380 MODEL 8738542 pseudo LOC102012693 splicing factor, proline- and glutamine-rich pseudogene NW_004955442 15809374 15820619 - 102012693 AGCD01037879;XR_262171 MODEL 39132004 rrna 5S_rRNA 5S ribosomal RNA 8786853 protein-coding Cxcr6 C-X-C motif chemokine receptor 6 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); ASSOCIATED WITH systemic scleroderma (ortholog) NW_004955420 26056464 26061992 - 102003029 AGCD01021389;GBDJ01402626;XM_005383457 XP_005383514 MODEL 8803010 pseudo LOC102016422 tubulin alpha-1C chain-like NW_004955437 6993985 6999689 + 102016422 AGCD01034448 MODEL 39134277 misc_rna 7SK 7SK RNA 8835204 protein-coding Efnb3 ephrin B3 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon choice point recognition (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH movement disease (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); plasma membrane (ortholog) NW_004955467 9217796 9225223 - 102006325 AGCD01051484;GBBH01129008;XM_005399466;XM_005399467 XP_005399523;XP_005399524 MODEL 8945037 protein-coding Gpr75 G protein-coupled receptor 75 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955441 19576490 19579447 - 102004010 AGCD01037354;XM_005391028 XP_005391085 MODEL 9013738 protein-coding Chst8 carbohydrate sulfotransferase 8 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN hormone biosynthetic process (ortholog); proteoglycan biosynthetic process (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); peeling skin syndrome 3 (ortholog) NW_004955468 3357368 3486195 + 102028401 AGCD01051859;AGCD01051860;GBDF01158746;XM_005399989;XM_005399990;XM_005399991;XM_005399992 XP_005400046;XP_005400047;XP_005400048;XP_005400049 MODEL 9030402 protein-coding Hrob homologous recombination factor with OB-fold ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA synthesis involved in DNA repair (ortholog); female gamete generation (ortholog); ASSOCIATED WITH Ovarian Dysgenesis 11 (ortholog); primary ovarian insufficiency (ortholog); FOUND IN site of DNA damage (ortholog) NW_004955451 17256593 17264872 + 102009341 AGCD01043731;GBDF01048431;XM_005394519;XM_005394520;XM_013519053 XP_005394576;XP_005394577;XP_013374507 MODEL 9025237 protein-coding LOC102011061 olfactory receptor 7G2-like NW_004955563 307152 309101 - 102011061 AGCD01074060;XM_013509132;XM_013509133 XP_013364586;XP_013364587 MODEL 8876262 pseudo LOC102005539 integrin beta-1-like NW_004955602 28357 31946 + 102005539 AGCD01076761 MODEL 8862704 pseudo LOC102024411 olfactory receptor 1571-like NW_004955626 143148 144021 + 102024411 AGCD01077469 MODEL 8912371 protein-coding Cs citrate synthase ENCODES a protein that exhibits acyltransferase activity, acyl groups converted into alkyl on transfer (ortholog); citrate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); carbohydrate metabolic process (ortholog); citrate metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH atrial fibrillation (ortholog); bipolar disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955458 3881798 3913044 - 102028061 AGCD01047353;GBBH01060543;XM_005397516 XP_005397573 MODEL 8936399 ncrna LOC102017574 uncharacterized LOC102017574 NW_004955419 16993391 17030182 + 102017574 AGCD01020138;AGCD01020139;GBDF01119453;XR_001233601;XR_001233602;XR_001233603;XR_001233604;XR_001233605;XR_260638;XR_260639 MODEL 9018878 ncrna LOC102015664 uncharacterized LOC102015664 NW_004955437 9780174 9790963 - 102015664 AGCD01034543;GBDF01120701;XR_261871;XR_261872 MODEL 8955044 protein-coding Bricd5 BRICHOS domain containing 5 NW_004955442 15054116 15056506 + 102028586 AGCD01037856;GBDF01024331;XM_005391445;XM_005391446;XM_013517734;XM_013517735 XP_005391502;XP_005391503;XP_013373188;XP_013373189 MODEL 8906960 protein-coding LOC102008062 keratin-associated protein 10-10-like NW_004955407 41537601 41546262 - 102008062 AGCD01007870;XM_013505443 XP_013360897 MODEL 8937108 protein-coding LOC102019130 uncharacterized protein CXorf22-like NW_004955674 10208 53094 + 102019130 AGCD01077956;AGCD01077957;AGCD01077958;AGCD01077959;AGCD01077960;GBCE01169748;XM_005415069 XP_005415126 MODEL 8819520 pseudo LOC102009561 transcription elongation regulator 1 pseudogene NW_004955402 134030 135953 + 102009561 AGCD01000008 MODEL 8725546 protein-coding LOC102013444 vomeronasal type-2 receptor 116-like NW_004955524 3567737 3596413 + 102013444 AGCD01068907;AGCD01068908;AGCD01068909;AGCD01068910;AGCD01068911;AGCD01068912;AGCD01068913;GBDF01116192;XM_005409711 XP_005409768 MODEL 8966506 protein-coding Cpa6 carboxypeptidase A6 ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); Confusion (ortholog); Developmental Disabilities (ortholog) NW_004955444 11624842 11922293 + 102008037 AGCD01039047;AGCD01039048;AGCD01039049;AGCD01039050;AGCD01039051;AGCD01039052;AGCD01039053;AGCD01039054;AGCD01039055;AGCD01039056;AGCD01039057;GBDJ01401155;XM_005392121 XP_005392178 MODEL 8863916 ncrna LOC102008419 uncharacterized LOC102008419 NW_004955420 12338859 12346661 + 102008419 AGCD01020861;GBDF01156176;XR_001233788;XR_001233789;XR_260709 MODEL 8753031 ncrna LOC102013804 uncharacterized LOC102013804 NW_004955409 11616375 11626479 + 102013804 AGCD01009516;GBDF01277087;XR_001232621;XR_001232622 MODEL 8864745 pseudo LOC102007638 allograft inflammatory factor 1 pseudogene NW_004955464 13479825 13484167 - 102007638 AGCD01050284;AGCD01050285 MODEL 8850729 protein-coding LOC102010298 liver carboxylesterase 1 NW_004955433 13504228 13538598 - 102010298 AGCD01031693;AGCD01031694;AGCD01031695;GBBH01016309;XM_005388336;XM_013516222 XP_005388393;XP_013371676 MODEL 8910170 protein-coding LOC102003715 prolactin-like NW_004955634 57648 64392 - 102003715 AGCD01077606;XM_005415042 XP_005415099 MODEL 8790087 protein-coding Abhd17b abhydrolase domain containing 17B, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of protein localization to microtubule (ortholog); positive regulation of protein localization to endosome (ortholog); protein depalmitoylation (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) NW_004955434 1262956 1302877 + 102020481 AGCD01032060;AGCD01032061;GBBH01207117;XM_005388523;XM_005388524;XM_013516341;XM_013516342;XM_013516343;XM_013516344 XP_005388580;XP_005388581;XP_013371795;XP_013371796;XP_013371797;XP_013371798 MODEL 39132251 rrna 5S_rRNA 5S ribosomal RNA 8928020 protein-coding CUNH10orf90 chromosome unknown C10orf90 homolog ENCODES a protein that exhibits histone deacetylase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of cell growth (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955477 4299277 4510702 - 102012090 AGCD01055581;AGCD01055582;AGCD01055583;AGCD01055584;GBCQ01114390;XM_005402005;XM_013503016;XM_013503017;XM_013503018;XM_013503019 XP_005402062;XP_013358470;XP_013358471;XP_013358472;XP_013358473 MODEL 8951436 protein-coding Dpf2 double PHD fingers 2 ENCODES a protein that exhibits histone H3K14ac reader activity (ortholog); histone H3K9me2/3 reader activity (ortholog); histone H4K16ac reader activity (ortholog); INVOLVED IN negative regulation of myeloid progenitor cell differentiation (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Coffin-Siris syndrome (ortholog); Coffin-Siris syndrome 1 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 19894502 19910989 - 102011327 AGCD01023047;GBDI01112518;XM_005384500;XM_013514217;XM_013514218 XP_005384557;XP_013369671;XP_013369672 MODEL 8984008 protein-coding Hs1bp3 HCLS1 binding protein 3 INVOLVED IN regulation of apoptotic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) NW_004955469 3105897 3133918 - 102015711 AGCD01052289;GBCQ01034894;XM_005400353;XM_005400354;XM_013522655;XM_013522656;XR_001236990 XP_005400410;XP_005400411;XP_013378109;XP_013378110 MODEL 9035295 pseudo LOC102011448 60S ribosomal protein L5-like NW_004955419 28970094 28970946 - 102011448 AGCD01020481 MODEL 8734359 ncrna LOC102014563 uncharacterized LOC102014563 NW_004955418 3097536 3098494 - 102014563 AGCD01018779;GBDI01078960;XR_260538 MODEL 8836911 ncrna LOC102014161 uncharacterized LOC102014161 NW_004955514 3250257 3253611 + 102014161 AGCD01067093;GBDF01074600;XR_264505 MODEL 8794402 protein-coding Il1a interleukin 1 alpha ENCODES a protein that exhibits copper ion binding (ortholog); cytokine activity (ortholog); INVOLVED IN cellular response to heat (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); allergic bronchopulmonary aspergillosis (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955470 1527710 1538418 + 102024893 AGCD01052644;AGCD01052645;GBDK01021553;XM_005400596 XP_005400653 MODEL 8904635 protein-coding LOC102012694 solute carrier organic anion transporter family member 5A1 NW_004955444 9855499 9886614 + 102012694 AGCD01038995;GBCQ01074693;XM_013518225 XP_013373679 MODEL 39133584 misc_rna 7SK 7SK RNA 39134004 misc_rna 7SK 7SK RNA 8968662 protein-coding Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN intracellular chloride ion homeostasis (ortholog); negative regulation of delayed rectifier potassium channel activity (ortholog); negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 6 (ortholog); hypokalemic periodic paralysis (ortholog); FOUND IN basolateral part of cell (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955414 17166537 17200385 + 102007421 AGCD01015234;AGCD01015235;GBBH01198236;XM_005379918;XM_005379919;XM_005379920;XM_005379922;XM_005379923;XM_013511942;XR_001233141 XP_005379975;XP_005379976;XP_005379977;XP_005379979;XP_005379980;XP_013367396 MODEL 8775375 protein-coding Eral1 Era like 12S mitochondrial rRNA chaperone 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); RNA folding chaperone (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial small ribosomal subunit assembly (ortholog); ribosomal small subunit assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hearing Loss (ortholog); Perrault syndrome (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955481 4315139 4320983 - 102019803 AGCD01056933;AGCD01056934;GBCE01115661;XM_005402709;XM_013503383 XP_005402766;XP_013358837 MODEL 9035641 ncrna LOC102021667 uncharacterized LOC102021667 NW_004955485 5568877 5574178 + 102021667 AGCD01058597;GBDF01042208;XR_263907 MODEL 8889828 protein-coding LOC102013060 chromosome-associated kinesin KIF4A-like NW_004955409 19322565 19326894 - 102013060 AGCD01009867;GBDF01046103;XM_005376878 XP_005376935 MODEL 9049819 protein-coding Dglucy D-glutamate cyclase ENCODES a protein that exhibits D-glutamate cyclase activity (ortholog); INVOLVED IN glutamate metabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955438 13440883 13554969 + 102015449 AGCD01035286;AGCD01035287;AGCD01035288;AGCD01035289;AGCD01035290;AGCD01035291;AGCD01035292;AGCD01081645;GBCQ01129162;XM_013517220;XM_013517221;XM_013517222 XP_013372674;XP_013372675;XP_013372676 MODEL 8825168 protein-coding Emilin3 elastin microfibril interfacer 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN cytoplasm (ortholog); EMILIN complex (ortholog) NW_004955445 15590996 15599813 + 102028030 AGCD01039848;GBDK01269639;XM_005392503;XM_005392505;XM_013518276 XP_005392560;XP_005392562;XP_013373730 MODEL 8977920 ncrna LOC102020195 uncharacterized LOC102020195 NW_004955405 35941436 35942684 - 102020195 AGCD01005405;GBDK01097372;XR_259433 MODEL 8964151 pseudo LOC102011910 WD repeat-containing protein 25-like NW_004955437 2585766 2597361 - 102011910 AGCD01034277;AGCD01034278 MODEL 9032967 protein-coding LOC102009166 TRIO and F-actin-binding protein-like NW_004955413 24091962 24110422 + 102009166 AGCD01014347;AGCD01014348;XM_013511302 XP_013366756 MODEL 8838314 protein-coding LOC102015289 olfactory receptor 6C75 NW_004955458 2726283 2727218 - 102015289 AGCD01047241;XM_005397244 XP_005397301 MODEL 8905595 protein-coding LOC102005543 PRAME family member 20-like NW_004955615 219115 226336 + 102005543 AGCD01077251;XM_013510139 XP_013365593 MODEL 9039818 protein-coding Ank2 ankyrin 2 ENCODES a protein that exhibits ATPase binding (ortholog); channel activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); atrial cardiac muscle cell to AV node cell communication (ortholog); atrial septum development (ortholog); ASSOCIATED WITH ankyrin-B-related cardiac arrhythmia (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); FOUND IN A band (ortholog); basolateral plasma membrane (ortholog); costamere (ortholog) NW_004955457 13624590 13938427 - 102015379 AGCD01047049;AGCD01047050;AGCD01047051;AGCD01047052;AGCD01047053;AGCD01047054;GBDF01193274;XM_005397083;XM_005397085;XM_013520726 XP_005397140;XP_005397142;XP_013376180 MODEL 8822781 protein-coding Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ENCODES a protein that exhibits enzyme activator activity (ortholog); isocitrate dehydrogenase (NAD+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN isocitrate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Emery-Dreifuss muscular dystrophy (ortholog); retinitis pigmentosa 99 (ortholog); spastic quadriplegic cerebral palsy (ortholog); FOUND IN isocitrate dehydrogenase complex (NAD+) (ortholog); mitochondrion (ortholog); photoreceptor inner segment (ortholog) NW_004955580 500712 507512 - 102017929 AGCD01075607;GBBH01060315;XM_005414148;XM_013509712 XP_005414205;XP_013365166 MODEL 8915173 protein-coding Ddah1 dimethylarginine dimethylaminohydrolase 1 ENCODES a protein that exhibits dimethylargininase activity (ortholog); nitric-oxide synthase regulator activity (ortholog); INVOLVED IN L-arginine catabolic process (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of cellular response to hypoxia (ortholog); ASSOCIATED WITH cardiovascular system disease (ortholog); coronary artery disease (ortholog); hypertension (ortholog) NW_004955423 8637116 8673881 + 102024696 AGCD01023635;GBDF01159806;XM_005385138 XP_005385195 MODEL 8823994 protein-coding LOC102008803 vomeronasal type-1 receptor 4-like NW_004955603 30312 31232 - 102008803 AGCD01076804;XM_005414841 XP_005414898 MODEL 9040693 protein-coding Itih4 inter-alpha-trypsin inhibitor heavy chain 4 INVOLVED IN acute-phase response (ortholog); response to cytokine (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Bacteremia (ortholog); Chronic Hepatitis B (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); plasma membrane (ortholog) NW_004955430 2772064 2787912 - 102026560 AGCD01029180;AGCD01029181;GBDK01322599;XM_005387354 XP_005387411 MODEL 8751815 pseudo LOC102016054 60S ribosomal protein L10a pseudogene NW_004955418 1075870 1076520 + 102016054 AGCD01018708 MODEL 10246395 ncrna LOC106149916 uncharacterized LOC106149916 NW_004955457 515882 533018 - 106149916 AGCD01046711;XR_001236381 MODEL 8769096 protein-coding Cxxc1 CXXC finger protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); unmethylated CpG binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; FOUND IN histone methyltransferase complex (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955402 35335520 35340891 - 102017933 AGCD01000878;GBBH01090896;XM_005372924;XM_005372925;XM_013510694;XM_013510699 XP_005372981;XP_005372982;XP_013366148;XP_013366153 MODEL 8801420 protein-coding LOC102020931 olfactory receptor 7A10-like NW_004955495 8365313 8366269 + 102020931 AGCD01062202;XM_013505129 XP_013360583 MODEL 8771131 ncrna LOC102013813 uncharacterized LOC102013813 NW_004955468 8103085 8110282 - 102013813 AGCD01052020;GBDF01192334;XR_001236949;XR_263405 MODEL 8853150 protein-coding Gpr82 G protein-coupled receptor 82 INVOLVED IN adipose tissue development (ortholog); energy homeostasis (ortholog); response to food (ortholog); ASSOCIATED WITH prostate cancer (ortholog) NW_004955565 1075457 1080418 - 102027242 AGCD01074303;GBCE01020711;XM_005413248;XM_013509211 XP_005413305;XP_013364665 MODEL 8966539 protein-coding LOC102011064 transmembrane protease serine 11D NW_004955447 4999930 5082159 + 102011064 AGCD01040736;AGCD01040737;AGCD01040738;AGCD01040739;AGCD01040740;AGCD01040741;GBDI01165135;XM_013518471 XP_013373925 MODEL 8787195 protein-coding Chst9 carbohydrate sulfotransferase 9 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN sulfur compound metabolic process (ortholog) NW_004955402 14892707 15115846 - 102014958 AGCD01000439;AGCD01000440;AGCD01000441;GBDJ01114105;XM_005372733;XM_005372734;XM_005372735;XM_013506087;XM_013506121;XM_013506152 XP_005372790;XP_005372791;XP_005372792;XP_013361541;XP_013361575;XP_013361606 MODEL 8894547 protein-coding Dguok deoxyguanosine kinase ENCODES a protein that exhibits deoxyadenosine kinase activity (ortholog); deoxyguanosine kinase activity (ortholog); deoxynucleoside kinase activity (ortholog); INVOLVED IN dAMP salvage (ortholog); dGTP metabolic process (ortholog); mitochondrial ATP synthesis coupled electron transport (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ortholog); Cognitive Dysfunction (ortholog); Deoxyguanosine Kinase Deficiency (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955424 11739904 11773884 - 102007350 AGCD01024573;AGCD01024574;GBDI01313341;XM_005385533;XM_005385534 XP_005385590;XP_005385591 MODEL 8701905 ncrna LOC102024423 uncharacterized LOC102024423 NW_004955453 14383498 14394719 - 102024423 AGCD01044864;GBDF01252476;XR_001236145;XR_001236146;XR_262734;XR_262735 MODEL 9032212 protein-coding LOC102007642 skin secretory protein xP2-like NW_004955467 8730837 8734563 + 102007642 AGCD01051466;AGCD01051467;GBDF01044983;XM_005399752 XP_005399809 MODEL 8945300 protein-coding Fbxo24 F-box protein 24 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN axoneme assembly (ortholog); chromatin organization (ortholog); cilium organization (ortholog); FOUND IN nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955573 305516 313107 - 102019969 AGCD01074973;GBDK01342818;XM_005413717;XM_013509469;XM_013509470;XM_013509471;XM_013509472 XP_005413774;XP_013364923;XP_013364924;XP_013364925;XP_013364926 MODEL 39132005 rrna 5S_rRNA 5S ribosomal RNA 9062374 pseudo LOC102015665 60S ribosomal protein L31 pseudogene NW_004955543 1071306 1071676 - 102015665 AGCD01071612 MODEL 8999705 ncrna LOC102019134 uncharacterized LOC102019134 NW_004955405 28220948 28224636 + 102019134 AGCD01005233;GBDF01177491;XR_259406 MODEL 8746931 ncrna LOC102009563 uncharacterized LOC102009563 NW_004955403 20142634 20146416 - 102009563 AGCD01002154;XR_259188 MODEL 39134278 misc_rna 7SK 7SK RNA 9031049 ncrna LOC102008064 uncharacterized LOC102008064 NW_004955408 4366570 4372625 + 102008064 AGCD01008109;GBDF01296436;XR_001231915;XR_001231916;XR_001231917;XR_001231918;XR_259659 MODEL 9022863 pseudo LOC102014564 volume-regulated anion channel subunit LRRC8D-like NW_004955481 10440693 10443053 - 102014564 AGCD01057150 MODEL 8928271 protein-coding Ddah2 DDAH family member 2, ADMA-independent ENCODES a protein that exhibits dimethylargininase activity (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); pre-eclampsia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955437 265727 269016 - 102027108 AGCD01034115;GBCQ01040939;XM_005389381;XM_005389382;XM_013516810 XP_005389438;XP_005389439;XP_013372264 MODEL 8858528 ncrna LOC102008426 uncharacterized LOC102008426 NW_004955493 5730211 5734272 - 102008426 AGCD01061075;GBCQ01114580;XR_001231278;XR_264085 MODEL 8776110 protein-coding Cpap centrosome assembly and centriole elongation protein ENCODES a protein that exhibits gamma-tubulin binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astral microtubule nucleation (ortholog); centriole assembly (ortholog); centriole elongation (ortholog); ASSOCIATED WITH autosomal recessive primary microcephaly (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955497 432595 497335 - 102005612 AGCD01062411;AGCD01062412;AGCD01062413;AGCD01062414;AGCD01062415;AGCD01062416;AGCD01062417;AGCD01062418;AGCD01062419;AGCD01062420;GBDF01124703;XM_005406290;XM_013505458;XM_013505459;XM_013505460;XM_013505461 XP_005406347;XP_013360912;XP_013360913;XP_013360914;XP_013360915 MODEL 8999086 protein-coding Il1b interleukin 1 beta ENCODES a protein that exhibits cytokine activity (ortholog); integrin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cellular response to antibiotic (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH otitis media; Otitis Media with Effusion; abdominal aortic aneurysm (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); secretory granule (ortholog) NW_004955470 1486936 1491888 + 102024552 AGCD01052642;GBCE01179444;XM_005400595 XP_005400652 MODEL 8740163 pseudo LOC102020526 elongation factor 1-beta pseudogene NW_004955406 13063771 13075531 + 102020526 AGCD01005932 MODEL 9038231 protein-coding Efr3a EFR3 homolog A INVOLVED IN protein localization to plasma membrane (ortholog); synaptic vesicle priming (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955461 6588178 6687499 + 102010676 AGCD01048910;AGCD01048911;GBCQ01067382;XM_005398007;XM_005398008;XM_005398009;XM_005398010;XM_005398011 XP_005398064;XP_005398065;XP_005398066;XP_005398067;XP_005398068 MODEL 8888144 protein-coding LOC102012695 olfactory receptor 2Z1 ASSOCIATED WITH prostate cancer (ortholog) NW_004955563 779884 780825 - 102012695 AGCD01074088;XM_005413204 XP_005413261 MODEL 8834085 ncrna LOC102021670 uncharacterized LOC102021670 NW_004955486 3982324 3990407 - 102021670 AGCD01059050;GBDF01221596;XR_001231149 MODEL 8867999 pseudo LOC102013061 cysteine-rich with EGF-like domain protein 2 pseudogene NW_004955409 26647055 26648471 + 102013061 AGCD01010196 MODEL 8821884 pseudo LOC102011911 citrate synthase, mitochondrial-like NW_004955438 13790119 13791348 - 102011911 AGCD01035308 MODEL 8995095 protein-coding Gpr83 G protein-coupled receptor 83 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); FOUND IN cilium (ortholog); non-motile cilium (ortholog); plasma membrane (ortholog) NW_004955414 216867 229659 + 102018078 AGCD01014711;GBDF01221194;GBDF01221196;XM_005379679;XM_005379680 XP_005379736;XP_005379737 MODEL 8777477 ncrna LOC102005544 uncharacterized LOC102005544 NW_004955403 19218644 19229973 + 102005544 AGCD01002120;GBDF01056356;XR_001233395 MODEL 8943748 ncrna LOC102015291 uncharacterized LOC102015291 NW_004955409 5874528 5879794 + 102015291 AGCD01009326;GBDF01211387;XR_259754 MODEL 8782871 protein-coding Csad cysteine sulfinic acid decarboxylase ENCODES a protein that exhibits sulfinoalanine decarboxylase activity (ortholog); INVOLVED IN obsolete L-cysteine catabolic process to hypotaurine (ortholog); taurine biosynthetic process (ortholog); taurine biosynthetic process from L-cysteine (ortholog); PARTICIPATES IN taurine and hypotaurine metabolic pathway; transsulfuration pathway of homocysteine metabolism; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955458 423156 449763 - 102014644 AGCD01047125;AGCD01047126;AGCD01047127;GBCB01087240;XM_005397155;XM_005397156;XM_005397157;XM_005397158;XM_005397159;XM_005397160;XM_013520947;XM_013520948;XM_013520949 XP_005397212;XP_005397213;XP_005397214;XP_005397215;XP_005397216;XP_005397217;XP_013376401;XP_013376402;XP_013376403 MODEL 8883865 pseudo LOC102011451 uncharacterized LOC102011451 NW_004955421 28537400 28548971 - 102011451 AGCD01022331 MODEL 8863334 ncrna LOC102016427 uncharacterized LOC102016427 NW_004955442 4388403 4394267 - 102016427 AGCD01037526;GBDF01208690;XR_262113 MODEL 39133586 misc_rna 7SK 7SK RNA 8956603 ncrna LOC102013451 uncharacterized LOC102013451 NW_004955547 654544 658859 - 102013451 AGCD01072171;GBDK01382015;XR_001232230;XR_264899 MODEL 9044280 protein-coding Itih5 inter-alpha-trypsin inhibitor heavy chain 5 INVOLVED IN uterus development (ortholog); ASSOCIATED WITH prostate cancer (ortholog) NW_004955421 24042405 24125085 - 102007668 AGCD01022204;AGCD01022205;AGCD01022206;GBCE01092378;XM_005383872;XM_013513750;XM_013513751 XP_005383929;XP_013369204;XP_013369205 MODEL 8762936 ncrna LOC102014163 uncharacterized LOC102014163 NW_004955435 8361372 8392355 + 102014163 AGCD01033001;GBCQ01143546;XR_261671 MODEL 8971425 protein-coding Dpf3 double PHD fingers 3 INVOLVED IN muscle cell differentiation (ortholog); nervous system development (ortholog); PARTICIPATES IN histone modification pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN nBAF complex (ortholog); nucleoplasm (ortholog) NW_004955523 2423035 2718930 + 102004110 AGCD01068580;AGCD01068581;AGCD01068582;AGCD01068583;AGCD01068584;AGCD01068585;AGCD01068586;AGCD01068587;GBDF01253567;XM_005409438;XM_013507166;XM_013507168;XR_001231939;XR_264640 XP_005409495;XP_013362620;XP_013362622 MODEL 39134005 misc_rna 7SK 7SK RNA 8786646 protein-coding Kcne4 potassium voltage-gated channel subfamily E regulatory subunit 4 ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); transmembrane transporter binding (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955453 10822977 10826191 - 102022043 AGCD01044790;GBDK01027779;XM_005395490 XP_005395547 MODEL 8707874 ncrna LOC102010301 uncharacterized LOC102010301 NW_004955524 791217 792333 + 102010301 AGCD01068708;GBDF01013580;XR_001231946 MODEL 8934253 protein-coding LOC102020932 melanoma-associated antigen 8-like NW_004955498 3294883 3295887 - 102020932 AGCD01062891;XM_005406476 XP_005406533 MODEL 8897014 pseudo LOC102003718 N-alpha-acetyltransferase 50 pseudogene NW_004955988 4743 5256 + 102003718 AGCD01078815 MODEL 8739454 protein-coding Cxxc4 CXXC finger protein 4 ENCODES a protein that exhibits methyl-CpG binding (ortholog); PDZ domain binding (ortholog); zinc ion binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); Wnt signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); nucleus (ortholog) NW_004955496 4523027 4546671 + 102011334 AGCD01062325;AGCD01062326;GBDF01114472;XM_013505373 XP_013360827 MODEL 39132252 rrna 5S_rRNA 5S ribosomal RNA 8940879 ncrna LOC102017575 uncharacterized LOC102017575 NW_004955484 4718134 4736293 - 102017575 AGCD01058230;AGCD01058231;GBDF01021447;XR_263886 MODEL 8933198 ncrna LOC102009168 uncharacterized LOC102009168 NW_004955471 210298 228033 - 102009168 AGCD01052952;GBDF01209473;XR_263509 MODEL 8873055 protein-coding Abhd17c abhydrolase domain containing 17C, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of protein localization to microtubule (ortholog); positive regulation of protein localization to endosome (ortholog); protein depalmitoylation (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955416 11495651 11543276 + 102020244 AGCD01017188;AGCD01017189;GBBH01143645;XM_005381433 XP_005381490 MODEL 8917253 protein-coding Eml1 EMAP like 1 ENCODES a protein that exhibits microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN brain development (ortholog); hematopoietic progenitor cell differentiation (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH congenital nervous system abnormality (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); microtubule (ortholog); microtubule cytoskeleton (ortholog) NW_004955438 20991432 21137570 + 102030477 AGCD01035528;AGCD01035529;GBCB01022439;XM_005390419;XM_005390420;XM_005390421;XM_005390422;XM_005390423;XM_005390424;XM_005390425 XP_005390476;XP_005390477;XP_005390478;XP_005390479;XP_005390480;XP_005390481;XP_005390482 MODEL 8794498 protein-coding Brinp1 BMP/retinoic acid inducible neural specific 1 INVOLVED IN behavioral fear response (ortholog); brain development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955419 8529213 8704113 + 102029398 AGCD01019899;AGCD01019900;GBBH01200609;XM_005382605 XP_005382662 MODEL 8967277 protein-coding CUNH11orf24 chromosome unknown C11orf24 homolog FOUND IN Golgi apparatus (ortholog) NW_004955422 17563188 17573079 + 102005153 AGCD01022926;AGCD01022927;AGCD01022928;GBBH01102136;XM_005384279;XM_013514340 XP_005384336;XP_013369794 MODEL 8895333 pseudo LOC102008806 28S ribosomal protein S36, mitochondrial pseudogene NW_004955451 2025250 2026677 + 102008806 AGCD01043004;XM_005393966 MODEL 9026966 protein-coding Hs2st1 heparan sulfate 2-O-sulfotransferase 1 ENCODES a protein that exhibits heparan sulfate 2-sulfotransferase activity (ortholog); INVOLVED IN gene expression (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); heparin proteoglycan metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); NEUROFACIOSKELETAL SYNDROME WITH OR WITHOUT RENAL AGENESIS (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955423 7090246 7253608 - 102018843 AGCD01023594;AGCD01023595;AGCD01023596;GBBH01222046;GBDI01323962;XM_005385118;XM_005385119 XP_005385175;XP_005385176 MODEL 39132006 rrna 5S_rRNA 5S ribosomal RNA 8837995 protein-coding Gpr84 G protein-coupled receptor 84 FOUND IN receptor complex (ortholog) NW_004955458 1602241 1604492 - 102005900 AGCD01047193;GBCE01172963;XM_005397219 XP_005397276 MODEL 8824773 protein-coding Ank3 ankyrin 3 ENCODES a protein that exhibits cadherin binding (ortholog); channel activator activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); axon development (ortholog); axon guidance (ortholog); ASSOCIATED WITH alcohol-related birth defects (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 37 (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); basal plasma membrane (ortholog) NW_004955425 13522233 13851286 - 102015129 AGCD01025538;AGCD01025539;AGCD01025540;AGCD01025541;AGCD01025542;AGCD01025543;AGCD01025544;GBDJ01224829;XM_013514807;XM_013514808;XM_013514809;XM_013514810;XM_013514811;XM_013514812;XM_013514813;XM_013514814;XM_013514815;XM_013514816;XM_013514817;XM_013514818;XM_013514819;XM_013514820;XM_013514821;XM_013514822;XM_013514823;XM_013514824;XM_013514825 XP_013370261;XP_013370262;XP_013370263;XP_013370264;XP_013370265;XP_013370266;XP_013370267;XP_013370268;XP_013370269;XP_013370270;XP_013370271;XP_013370272;XP_013370273;XP_013370274;XP_013370275;XP_013370276;XP_013370277;XP_013370278;XP_013370279 MODEL 8942368 pseudo LOC102016428 high mobility group protein B2 pseudogene NW_004955442 15397676 15398555 - 102016428 AGCD01037870 MODEL 9033791 protein-coding LOC102009564 regulator of nonsense transcripts 3A-like NW_004956152 404 2615 - 102009564 AGCD01079146;GBDJ01132460;XM_005415172 XP_005415229 MODEL 8798803 pseudo LOC102020197 KDEL motif-containing protein 2 pseudogene NW_004955405 14139351 14140744 + 102020197 AGCD01004919 MODEL 8815816 pseudo LOC102013815 tetraspanin-9-like NW_004955413 1101938 1110529 + 102013815 AGCD01013511 MODEL 8755540 pseudo LOC102011065 60S ribosomal protein L4-like NW_004955447 17826623 17831419 + 102011065 AGCD01041137 MODEL 8762381 ncrna LOC102021673 uncharacterized LOC102021673 NW_004955488 1906171 1944728 - 102021673 AGCD01059513;AGCD01059514;GBDF01253331;XR_263996 MODEL 8833754 protein-coding Idnk IDNK gluconokinase NW_004955432 3626148 3647285 - 102011033 AGCD01030672;AGCD01030673;GBDI01383927;XM_013516000;XM_013516001 XP_013371454;XP_013371455 MODEL 8947428 protein-coding LOC102007648 olfactory receptor 52B6 NW_004955414 21480839 21485708 + 102007648 AGCD01015421;XM_005380092 XP_005380149 MODEL 9058628 pseudo LOC102011913 60S ribosomal protein L35 pseudogene NW_004955545 891588 891958 - 102011913 AGCD01071824 MODEL 8753712 protein-coding LOC102024431 olfactory receptor 9-like NW_004955458 3112558 3113496 - 102024431 AGCD01047271;XM_013520801 XP_013376255 MODEL 8716984 protein-coding Dhcr24 24-dehydrocholesterol reductase ENCODES a protein that exhibits Delta24(24-1) sterol reductase activity (ortholog); Delta24-sterol reductase activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleus (ortholog) NW_004955464 4533928 4557893 + 102024198 AGCD01049992;GBCE01031278;XM_005398508 XP_005398565 MODEL 9033223 ncrna LOC102015298 uncharacterized LOC102015298 NW_004955410 30514436 30531199 - 102015298 AGCD01011308;AGCD01011309;GBDK01243564;XR_259890 MODEL 8958249 pseudo LOC102021677 40S ribosomal protein S6 pseudogene NW_004955422 2919897 2921786 - 102021677 AGCD01022495 MODEL 9007798 pseudo LOC102011459 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955424 20453388 20454636 + 102011459 AGCD01024856 MODEL 8809183 protein-coding Eml2 EMAP like 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); regulation of microtubule nucleation (ortholog); FOUND IN mitotic spindle (ortholog) NW_004955574 106788 135289 - 102014957 AGCD01075084;AGCD01075085;GBDF01043668;XM_005413789 XP_005413846 MODEL 8862260 protein-coding Erap1 endoplasmic reticulum aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); endopeptidase activity (ortholog); interleukin-6 receptor binding (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); membrane protein ectodomain proteolysis (ortholog); positive regulation of angiogenesis (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); Behcet's disease (ortholog); cervix carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955418 15827560 15859720 + 102010260 AGCD01019112;AGCD01019113;GBCB01073859;GBCQ01099077;XM_013513048 XP_013368502 MODEL 8743020 protein-coding Ddb1 damage specific DNA binding protein 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); damaged DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); cellular response to UV (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); communication disorder (ortholog); congenital heart disease (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) NW_004955511 6209777 6233594 + 102017262 AGCD01066598;GBCQ01006346;XM_005408163 XP_005408220 MODEL 8885736 protein-coding LOC102014565 olfactory receptor 6F1-like NW_004955418 30415504 30416463 + 102014565 AGCD01019518;XM_013512883 XP_013368337 MODEL 9022994 ncrna LOC102020530 uncharacterized LOC102020530 NW_004955408 34283024 34285978 + 102020530 AGCD01008899;AGCD01008900;GBCB01005470;XR_259730 MODEL 8791901 ncrna LOC102013066 uncharacterized LOC102013066 NW_004955411 33836261 33840026 + 102013066 AGCD01012375;GBDF01143020;XR_259952 MODEL 8977030 protein-coding Cpb1 carboxypeptidase B1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog) NW_004955474 8632733 8697197 - 102015836 AGCD01054555;AGCD01054556;GBDJ01389119;XM_005401424;XM_013502714 XP_005401481;XP_013358168 MODEL 8988830 protein-coding Efr3b EFR3 homolog B INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); social behavior (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955469 7159087 7215234 + 102029498 AGCD01052411;GBCB01076312;XM_005400569 XP_005400626 MODEL 8851707 protein-coding Itk IL2 inducible T cell kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); gamma-delta T cell activation (ortholog); NK T cell differentiation (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH autoimmune lymphoproliferative syndrome (ortholog); Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 11387595 11447896 + 102013476 AGCD01008308;GBDF01262832;XM_005376228 XP_005376285 MODEL 8880421 protein-coding Ankar ankyrin and armadillo repeat containing NW_004955403 9132988 9174959 - 102006088 AGCD01001901;GBDF01126831;XM_005373315;XM_005373316;XM_013512359;XM_013512361;XR_001233247 XP_005373372;XP_005373373;XP_013367813;XP_013367815 MODEL 8722001 protein-coding Chsy1 chondroitin sulfate synthase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955416 28070981 28136848 - 102019389 AGCD01017623;AGCD01017624;AGCD01017625;GBBH01135196;GBDJ01128858;XM_005381708 XP_005381765 MODEL 8756334 pseudo LOC102016056 BAG family molecular chaperone regulator 5-like NW_004955419 14208992 14213561 + 102016056 AGCD01020014;AGCD01020015 MODEL 8820574 protein-coding LOC102019137 bcl-2-binding component 3-like NW_004955406 10664969 10668486 - 102019137 AGCD01005868;GBCE01089598;GBCQ01113563;XM_013520537 XP_013375991 MODEL 8701332 protein-coding Csdc2 cold shock domain containing C2 ENCODES a protein that exhibits RNA binding (ortholog); transcription factor binding (ortholog) NW_004955413 27079280 27090082 + 102020234 AGCD01014491;AGCD01014492;GBCE01171981;XM_005379354 XP_005379411 MODEL 8716845 protein-coding LOC102015667 olfactory receptor 4N2 NW_004955550 562632 566690 - 102015667 AGCD01072510;XM_005412033 XP_005412090 MODEL 39134279 misc_rna 7SK 7SK RNA 8892272 protein-coding Brinp2 BMP/retinoic acid inducible neural specific 2 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); locomotion (ortholog); ASSOCIATED WITH oral squamous cell carcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955406 16748824 16840924 + 102018683 AGCD01006000;GBDJ01100677;XM_005374909 XP_005374966 MODEL 39132007 rrna 5S_rRNA 5S ribosomal RNA 8790647 pseudo LOC102013453 gamma-aminobutyric acid receptor-associated protein pseudogene NW_004955442 14455390 14458901 - 102013453 AGCD01037821 MODEL 8916580 ncrna LOC102008434 uncharacterized LOC102008434 NW_004955424 11874487 11899092 + 102008434 AGCD01024575;AGCD01024576;GBDF01252131;XR_001234207;XR_001234208;XR_001234209;XR_001234210;XR_001234211;XR_001234212;XR_001234213;XR_261052 MODEL 8748895 protein-coding Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN glycosaminoglycan biosynthetic process (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); coronary artery disease (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955549 1591605 1623681 + 102011594 AGCD01072454;GBBH01012465;XM_013508540 XP_013363994 MODEL 8728342 ncrna LOC102012697 uncharacterized LOC102012697 NW_004955445 18404493 18440417 + 102012697 AGCD01039904;GBDF01229799;XR_262357 MODEL 8710156 pseudo LOC102021679 zinc finger CCHC domain-containing protein 7-like NW_004955492 3567660 3571346 + 102021679 AGCD01060698 MODEL 9017096 protein-coding Gpr85 G protein-coupled receptor 85 FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955432 19260909 19265744 - 102006702 AGCD01031176;GBDI01105800;XM_005388109;XM_013516083;XM_013516084 XP_005388166;XP_013371537;XP_013371538 MODEL 8983611 ncrna LOC102003724 uncharacterized LOC102003724 NW_004955452 17445620 17459241 - 102003724 AGCD01044554;AGCD01044555;GBDI01162489;XR_262704 MODEL 8740164 pseudo LOC102020933 RING finger protein 122-like NW_004955424 7895833 7898165 + 102020933 AGCD01024444 MODEL 9027868 ncrna LOC102020199 uncharacterized LOC102020199 NW_004955453 15979736 16061516 + 102020199 AGCD01044898;GBDI01367321;XR_262748;XR_262749 MODEL 9050510 protein-coding LOC102013816 olfactory receptor 52B4-like NW_004955414 20062525 20063545 + 102013816 AGCD01015355;XM_005380043 XP_005380100 MODEL 39132253 rrna 5S_rRNA 5S ribosomal RNA 9007944 ncrna LOC102017577 uncharacterized LOC102017577 NW_004955421 601934 608748 - 102017577 AGCD01021568;GBDF01217090;XR_001233853 MODEL 8820384 protein-coding LOC102011465 olfactory receptor 4D9-like NW_004955511 4030217 4031152 + 102011465 AGCD01066488;XM_005408064 XP_005408121 MODEL 8758132 protein-coding LOC102009169 putative olfactory receptor 56B2 NW_004955414 21743001 21743960 + 102009169 AGCD01015431;XM_005380502 XP_005380559 MODEL 8909584 pseudo LOC102011069 multifunctional protein ADE2 pseudogene NW_004955402 52895248 52897277 + 102011069 AGCD01001350 MODEL 8918901 pseudo LOC102008810 dnaJ homolog subfamily B member 6-like NW_004955403 27722644 27770774 - 102008810 AGCD01002323;AGCD01002324;AGCD01002325;AGCD01002326 MODEL 8937704 protein-coding Fbxo25 F-box protein 25 INVOLVED IN protein ubiquitination (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955403 58724206 58767637 - 102017417 AGCD01003190;AGCD01003191;GBDI01217579;XM_005373864;XM_005373865;XM_013515055 XP_005373921;XP_005373922;XP_013370509 MODEL 8917975 protein-coding Abhd18 abhydrolase domain containing 18 FOUND IN mitochondrion (ortholog) NW_004955428 13461446 13519184 - 102004188 AGCD01027953;AGCD01027954;AGCD01027955;AGCD01027956;GBDF01303927;XM_005386733;XM_005386734;XM_013515329;XM_013515330;XM_013515331 XP_005386790;XP_005386791;XP_013370783;XP_013370784;XP_013370785 MODEL 8915565 protein-coding CUNH11orf42 chromosome unknown C11orf42 homolog FOUND IN sperm flagellum (ortholog) NW_004955414 21946935 21954111 + 102016695 AGCD01015438;GBDF01047803;XM_005380122;XM_005380123 XP_005380179;XP_005380180 MODEL 39133588 misc_rna 7SK 7SK RNA 8867857 protein-coding LOC102008067 stereocilin NW_004955409 27019957 27035448 + 102008067 AGCD01010205;GBDF01030323;XM_005376944;XM_005376945 XP_005377001;XP_005377002 MODEL 8882082 ncrna LOC102015304 uncharacterized LOC102015304 NW_004955468 9262127 9356952 - 102015304 AGCD01052042;AGCD01052043;AGCD01052044;AGCD01052045;AGCD01052046;GBDF01252923;XR_001236884;XR_001236885 MODEL 8998209 pseudo LOC102019143 ubiquitin-60S ribosomal protein L40 pseudogene NW_004955407 36420998 36445058 - 102019143 AGCD01007767;AGCD01007768 MODEL 39134280 misc_rna 7SK 7SK RNA 8737225 protein-coding Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); cardiac muscle contraction (ortholog); negative regulation of potassium ion export across plasma membrane (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Sudden Unexpected Nocturnal Death Syndrome (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955490 6242197 6243627 + 102010910 AGCD01060218;GBDJ01215707;XM_005404665 XP_005404722 MODEL 8760598 pseudo LOC102015672 zinc transporter 9 pseudogene NW_004955446 17828072 17829356 + 102015672 AGCD01040386 MODEL 8873736 pseudo LOC102016431 prefoldin subunit 4 pseudogene NW_004955443 6937105 6937491 - 102016431 AGCD01038268 MODEL 8930496 protein-coding LOC102005547 breast cancer type 1 susceptibility protein homolog NW_004956027 800 5983 - 102005547 AGCD01078904;GBBH01191619;GBCQ01157973;XM_005415162 XP_005415219 MODEL 8725557 protein-coding Eml3 EMAP like 3 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); regulation of mitotic spindle assembly (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); midbody (ortholog) NW_004955599 580203 587268 + 102015584 AGCD01076660;GBCE01002611;XM_013510059;XM_013510060 XP_013365513;XP_013365514 MODEL 8781423 protein-coding Cxxc5 CXXC finger protein 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of generation of precursor metabolites and energy (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955418 932198 965894 - 102013719 AGCD01018694;AGCD01018695;GBDK01075972;XM_005382053;XM_005382054;XM_005382055;XM_005382056;XM_005382057;XM_013512966 XP_005382110;XP_005382111;XP_005382112;XP_005382113;XP_005382114;XP_013368420 MODEL 8985440 pseudo LOC102011914 N-alpha-acetyltransferase 50 pseudogene NW_004955441 5500863 5501537 + 102011914 AGCD01036878 MODEL 9010871 pseudo LOC102007650 zinc finger and BTB domain-containing protein 14-like NW_004955470 12771610 12776657 - 102007650 AGCD01052939;AGCD01052940 MODEL 8876798 ncrna LOC102024432 uncharacterized LOC102024432 NW_004955460 10071259 10078235 - 102024432 AGCD01048571;AGCD01048572;GBDF01024354;XR_001236506;XR_001236507 MODEL 8781560 protein-coding Ido1 indoleamine 2,3-dioxygenase 1 ENCODES a protein that exhibits amino acid binding (ortholog); indoleamine 2,3-dioxygenase activity (ortholog); L-tryptophan 2,3-dioxygenase activity (ortholog); INVOLVED IN inflammatory response (ortholog); kynurenic acid biosynthetic process (ortholog); L-tryptophan catabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN cytoplasm (ortholog); smooth muscle contractile fiber (ortholog); stereocilium bundle (ortholog) NW_004955536 2944770 2955829 - 102018327 AGCD01070806;GBDK01080179;XM_005410538 XP_005410595 MODEL 8735886 protein-coding Il1f10 interleukin 1 family member 10 NW_004955470 1198185 1206032 - 102021648 AGCD01052630;GBCC01028004;XM_005400587;XM_013522701 XP_005400644;XP_013378155 MODEL 39134006 misc_rna 7SK 7SK RNA 8792115 protein-coding Csde1 cold shock domain containing E1 ENCODES a protein that exhibits lncRNA binding (ortholog); RISC complex binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); IRES-dependent viral translational initiation (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN CRD-mediated mRNA stability complex (ortholog); cytosol (ortholog) NW_004955435 18009228 18050329 - 102020838 AGCD01033381;AGCD01033382;AGCD01033383;GBCB01003066;XM_005389008;XM_005389009;XM_005389010;XM_005389011 XP_005389065;XP_005389066;XP_005389067;XP_005389068 MODEL 8801248 pseudo LOC102010302 glutathione S-transferase Mu 1-like NW_004955435 13225086 13240501 + 102010302 AGCD01033197;AGCD01033198;AGCD01033199 MODEL 8801295 ncrna LOC102013456 uncharacterized LOC102013456 NW_004955559 488549 488991 + 102013456 AGCD01073587;GBDF01109206;XR_264993 MODEL 9065969 protein-coding Brinp3 BMP/retinoic acid inducible neural specific 3 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); exploration behavior (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); cerebral infarction (ortholog); Chronic Periodontitis (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955406 27870115 28240328 - 102015074 AGCD01006290;AGCD01006291;AGCD01006292;AGCD01006293;AGCD01006294;AGCD01006295;GBDF01307752;XM_005375093;XM_005375094;XM_005375095 XP_005375150;XP_005375151;XP_005375152 MODEL 8970257 protein-coding LOC102013070 endothelial cell-selective adhesion molecule NW_004955412 25824222 25832315 - 102013070 AGCD01013174;GBBH01227824;XM_005378437 XP_005378494 MODEL 9037785 protein-coding Cpb2 carboxypeptidase B2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); fibrinolysis (ortholog); liver regeneration (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH amenorrhea (ortholog); Angina Pectoris (ortholog); Bacteremia (ortholog); FOUND IN extracellular space (ortholog) NW_004955518 3740348 3803540 - 102018634 AGCD01067808;AGCD01067809;AGCD01067810;GBDF01190736;XM_005409096;XM_005409097 XP_005409153;XP_005409154 MODEL 8782278 ncrna LOC102020934 uncharacterized LOC102020934 NW_004955425 15465355 15511571 + 102020934 AGCD01025582;GBDF01234167;XR_261146 MODEL 8828246 protein-coding LOC102016068 olfactory receptor 7D4-like NW_004955495 282769 351052 - 102016068 AGCD01061617;AGCD01061618;AGCD01061619;AGCD01061620;AGCD01061621;AGCD01061622;AGCD01061623;AGCD01061624;GBDF01262314;XM_005405550 XP_005405607 MODEL 8727811 protein-coding Efs embryonal Fyn-associated substrate ENCODES a protein that exhibits protein domain specific binding (ortholog); SH3 domain binding (ortholog); ASSOCIATED WITH Crohn's disease (ortholog) NW_004955409 36973522 36981079 + 102021103 AGCD01010485;GBBH01207846;XM_005377079;XM_005377081 XP_005377136;XP_005377138 MODEL 9053072 protein-coding Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN circadian rhythm (ortholog); glycosaminoglycan biosynthetic process (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH colon cancer (ortholog); lung cancer (ortholog); lung non-small cell carcinoma (ortholog) NW_004955493 1451960 1545156 + 102019282 AGCD01060895;AGCD01060896;GBDF01048807;XM_005405090 XP_005405147 MODEL 8740112 pseudo LOC102017578 non-histone chromosomal protein HMG-14 pseudogene NW_004955487 651945 652237 + 102017578 AGCD01059224 MODEL 9058657 pseudo LOC102014167 cytochrome b-c1 complex subunit 2, mitochondrial pseudogene NW_004955537 3383684 3403702 + 102014167 AGCD01070957 MODEL 8835525 protein-coding Ankdd1a ankyrin repeat and death domain containing 1A NW_004955450 10630303 10651918 - 102014514 AGCD01042627;AGCD01042628;GBDF01278959;XM_005393745;XM_005393746 XP_005393802;XP_005393803 MODEL 8716137 protein-coding LOC102009565 phosphoinositide-3-kinase-interacting protein 1-like NW_004957624 10 1097 - 102009565 AGCD01081020;GBDJ01181150;GBDK01091793;XM_005415233 XP_005415290 MODEL 9020744 protein-coding Dph1 diphthamide biosynthesis 1 ENCODES a protein that exhibits 2-(3-amino-3-carboxypropyl)histidine synthase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ia (ortholog); Dandy-Walker syndrome (ortholog); diphthamide deficiency syndrome (ortholog); FOUND IN 2-(3-amino-3-carboxypropyl)histidine synthase complex (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955481 1194428 1205231 - 102012429 AGCD01056828;XM_005402598 XP_005402655 MODEL 39133599 misc_rna 7SK 7SK RNA 8718403 ncrna LOC102008436 uncharacterized LOC102008436 NW_004955501 720309 731808 + 102008436 AGCD01064038;GBDF01158739;XR_001231521 MODEL 8701850 pseudo LOC102020532 olfactory receptor 6C74-like NW_004955458 2708299 2716739 + 102020532 AGCD01047240 MODEL 8979015 protein-coding Il1r1 interleukin 1 receptor type 1 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); heat acclimation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); aortic dissection (ortholog); Bacterial Keratitis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955470 7685498 7703374 + 102029851 AGCD01052803;GBDJ01419739;XM_005400837 XP_005400894 MODEL 8939220 protein-coding Ddb2 damage specific DNA binding protein 2 ENCODES a protein that exhibits damaged DNA binding (ortholog); protein-containing complex binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); nucleotide-excision repair (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH genetic disease (ortholog); ovarian cancer (ortholog); xeroderma pigmentosum (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) NW_004955422 961602 977066 - 102028867 AGCD01022442;AGCD01022443;GBCQ01117857;XM_005383999;XM_013513922;XR_001233894;XR_001233895;XR_001233896 XP_005384056;XP_013369376 MODEL 8733870 pseudo LOC102019148 60S ribosomal protein L26 pseudogene NW_004955409 36742477 36744893 + 102019148 AGCD01010480 MODEL 9057444 protein-coding Itln1 intelectin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); oligosaccharide binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); positive regulation of protein phosphorylation (ortholog); protein homotrimerization (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); Carotid Atherosclerosis (ortholog); left ventricular failure (ortholog); FOUND IN brush border membrane (ortholog); membrane raft (ortholog); receptor complex (ortholog) NW_004955468 12568465 12573663 - 102023019 AGCD01052158;GBDF01163338;XM_005400225 XP_005400282 MODEL 8986253 ncrna LOC102013817 uncharacterized LOC102013817 NW_004955414 27566936 27572188 - 102013817 AGCD01015663;GBDI01167262;XR_001233114 MODEL 8755608 ncrna LOC102013457 uncharacterized LOC102013457 NW_004955567 1568026 1577962 + 102013457 AGCD01074483;AGCD01074484;GBDF01014518;XR_265032 MODEL 9005065 protein-coding Kcng1 potassium voltage-gated channel modifier subfamily G member 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of potassium ion transmembrane transport (ortholog); regulation of potassium ion transport (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) NW_004955445 7411460 7427602 + 102021490 AGCD01039541;GBDJ01072856;GBDJ01072860;XM_005392303 XP_005392360 MODEL 8926075 protein-coding LOC102005548 cytochrome P450 2D6-like NW_004957079 5 1733 + 102005548 AGCD01080475;GBDI01036375;XM_013510243 XP_013365697 MODEL 8712202 ncrna LOC102020201 uncharacterized LOC102020201 NW_004955406 40111451 40112653 + 102020201 AGCD01006654;GBDF01027492;XR_259530 MODEL 39132254 rrna 5S_rRNA 5S ribosomal RNA 8907004 pseudo LOC102009179 60S ribosomal protein L23a pseudogene NW_004955418 372775 373635 - 102009179 AGCD01018673 MODEL 9016345 protein-coding Chsy3 chondroitin sulfate synthase 3 ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955415 2748776 2994041 + 102024331 AGCD01015916;AGCD01015917;AGCD01015918;AGCD01015919;AGCD01015920;AGCD01015921;GBCE01168857;GBDF01182882;XM_013512391 XP_013367845 MODEL 8951451 pseudo LOC102011915 solute carrier family 35 member G1-like NW_004955549 2589395 2589895 + 102011915 AGCD01072478 MODEL 8938904 protein-coding Dhcr7 7-dehydrocholesterol reductase ENCODES a protein that exhibits 7-dehydrocholesterol reductase activity (ortholog); cholesterol-5,6-oxide hydrolase activity (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); INVOLVED IN blood vessel development (ortholog); cell differentiation (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN cholesterol biosynthetic pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Animal Disease Models (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear outer membrane (ortholog) NW_004955422 15119155 15136771 + 102016485 AGCD01022876;GBCE01123738;XM_005384227;XM_005384228;XM_005384229;XM_013514319 XP_005384284;XP_005384285;XP_005384286;XP_013369773 MODEL 8963331 protein-coding LOC102011070 vomeronasal type-1 receptor 4-like NW_004955603 546797 561763 + 102011070 AGCD01076853;AGCD01076854;AGCD01076855;XM_005414848 XP_005414905 MODEL 8783146 protein-coding Eras ES cell expressed Ras NW_004955543 381756 383093 + 102026258 AGCD01071579;XM_005415247 XP_005415304 MODEL 8868655 ncrna LOC102008072 uncharacterized LOC102008072 NW_004955410 28976836 28996818 + 102008072 AGCD01011267;AGCD01011268;GBDF01307217;XR_259880 MODEL 8956875 protein-coding CUNH11orf52 chromosome unknown C11orf52 homolog ASSOCIATED WITH Carney-Stratakis syndrome (ortholog); FOUND IN cell junction (ortholog) NW_004955412 13635088 13640604 + 102023886 AGCD01012843;GBCB01120660;XM_005378097;XM_005378098 XP_005378154;XP_005378155 MODEL 8950621 protein-coding Hs3st4 heparan sulfate-glucosamine 3-sulfotransferase 4 INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) NW_004955493 4230929 4453508 + 102004613 AGCD01061026;AGCD01061027;AGCD01061028;AGCD01061029;AGCD01061030;AGCD01061031;GBCQ01057566;XM_005405131 XP_005405188 MODEL 39134282 misc_rna 7SK 7SK RNA 8705945 protein-coding LOC102012698 zinc finger protein 709-like NW_004955569 603589 617354 + 102012698 AGCD01074601;AGCD01074602;XM_013509369 XP_013364823 MODEL 39134007 misc_rna 7SK 7SK RNA 8828845 ncrna LOC102014569 uncharacterized LOC102014569 NW_004955420 9020872 9030965 + 102014569 AGCD01020738;GBDF01015376;XR_001233808;XR_260685 MODEL 8753559 pseudo LOC102015306 transcription initiation factor IIA subunit 2 pseudogene NW_004955413 33570657 33570987 - 102015306 AGCD01014679 MODEL 9026258 ncrna LOC102021680 uncharacterized LOC102021680 NW_004955422 20177741 20191497 - 102021680 AGCD01023068;GBDF01306760;XR_001234025;XR_001234026;XR_001234027;XR_001234028 MODEL 8818875 protein-coding Eftud2 elongation factor Tu GTP binding domain containing 2 INVOLVED IN cellular response to xenobiotic stimulus (ortholog); mRNA splicing, via spliceosome (ortholog); response to cocaine (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH colon cancer (ortholog); Developmental Disabilities (ortholog); esophageal atresia (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog) NW_004955451 17655659 17690117 - 102020875 AGCD01043765;AGCD01043766;AGCD01043767;GBBH01001764;XM_005394553 XP_005394610 MODEL 9041242 pseudo LOC102015673 actin-related protein 2/3 complex subunit 1A pseudogene NW_004955574 43213 44487 + 102015673 AGCD01075080 MODEL 8859876 protein-coding Gpr87 G protein-coupled receptor 87 ENCODES a protein that exhibits G protein-coupled purinergic nucleotide receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog) NW_004955448 2403188 2424209 - 102029457 AGCD01041282;GBDI01322143;XM_005393022;XM_005393023 XP_005393079;XP_005393080 MODEL 9017176 protein-coding LOC102011468 carnosine N-methyltransferase NW_004955512 4044108 4112888 + 102011468 AGCD01066722;AGCD01066723;AGCD01066724;AGCD01066725;AGCD01066726;AGCD01066727;AGCD01066728;AGCD01066729;GBCE01103835;GBDF01121011;XM_013506528 XP_013361982 MODEL 8778706 pseudo LOC102024433 sodium/myo-inositol cotransporter-like NW_004955409 5273472 5274818 + 102024433 AGCD01009311 MODEL 8992767 protein-coding Eml4 EMAP like 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); mitotic metaphase chromosome alignment (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); lung adenocarcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intercellular bridge (ortholog) NW_004955441 9633906 9715866 + 102021802 AGCD01037026;GBDI01081618;XM_013517609;XM_013517610;XR_001235328 XP_013373063;XP_013373064 MODEL 8748328 pseudo LOC102017579 elongation factor 1-beta-like NW_004955489 9292062 9293395 + 102017579 AGCD01060035 MODEL 8765013 protein-coding Cybb cytochrome b-245 beta chain ENCODES a protein that exhibits electron transfer activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH Binge Drinking (ortholog); brain infarction (ortholog); chronic granulomatous disease (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); NADPH oxidase complex (ortholog) NW_004955587 781533 818149 + 102012042 AGCD01076070;GBDI01225603;XM_005414451 XP_005414508 MODEL 8815456 protein-coding Fbxo27 F-box protein 27 FOUND IN SCF ubiquitin ligase complex (ortholog) NW_004955468 520321 525051 + 102028946 AGCD01051710;GBCB01060909;GBDJ01318098;XM_013522545 XP_013377999 MODEL 9026209 protein-coding Ido2 indoleamine 2,3-dioxygenase 2 ENCODES a protein that exhibits indoleamine 2,3-dioxygenase activity (ortholog); INVOLVED IN obsolete L-tryptophan catabolic process to L-kynurenine (ortholog); PARTICIPATES IN kynurenine metabolic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Chlamydia pneumonia (ortholog); Endotoxemia (ortholog); FOUND IN cytoplasm (ortholog) NW_004955536 2894410 2938862 - 102018023 AGCD01070804;AGCD01070805;AGCD01070806;GBCQ01095138;XM_013507732 XP_013363186 MODEL 8937340 protein-coding Cpd carboxypeptidase D ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to interleukin-2 (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) NW_004955481 2885243 2951574 - 102003131 AGCD01056887;AGCD01056888;AGCD01056889;AGCD01056890;AGCD01056891;GBBH01087971;GBCQ01037241;XM_005402656;XM_013503460 XP_005402713;XP_013358914 MODEL 8781238 protein-coding LOC102009182 zinc finger protein 709-like NW_004955483 60152 101435 + 102009182 AGCD01057595;AGCD01057596;AGCD01057597;AGCD01057598;XM_005403269;XM_013503758 XP_005403326;XP_013359212 MODEL 8733750 protein-coding LOC102014170 potassium channel subfamily K member 16 NW_004955437 4219222 4222532 + 102014170 AGCD01034363;GBDI01386526;XM_013516721 XP_013372175 MODEL 8788740 protein-coding Ankdd1b ankyrin repeat and death domain containing 1B NW_004955425 25094742 25154497 - 102023498 AGCD01025909;AGCD01025910;GBDJ01041314;XM_005386046;XM_013514785;XM_013514786;XM_013514787;XM_013514788 XP_005386103;XP_013370239;XP_013370240;XP_013370241;XP_013370242 MODEL 8992440 protein-coding LOC102010304 protein LEG1 homolog NW_004955436 8564756 8573875 + 102010304 AGCD01033743;GBBH01076388;XM_005389173 XP_005389230 MODEL 9064875 protein-coding Cse1l chromosome segregation 1 like PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955445 9012953 9053852 - 102027691 AGCD01039621;AGCD01039622;GBDF01083764;XM_013518240 XP_013373694 MODEL 8751119 ncrna LOC102016433 uncharacterized LOC102016433 NW_004955447 7660586 7680211 - 102016433 AGCD01040821;GBDF01160216;XR_001235705;XR_001235706;XR_262413 MODEL 8823979 protein-coding Dph2 diphthamide biosynthesis 2 ENCODES a protein that exhibits 2-(3-amino-3-carboxypropyl)histidine synthase activity (ortholog); INVOLVED IN protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); diphthamide deficiency syndrome (ortholog); diphthamide deficiency syndrome 2 (ortholog); FOUND IN 2-(3-amino-3-carboxypropyl)histidine synthase complex (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955537 3496688 3500147 + 102008457 AGCD01070959;GBCQ01153723;XM_005410691;XM_013507812 XP_005410748;XP_013363266 MODEL 8978578 ncrna LOC102013074 uncharacterized LOC102013074 NW_004955414 17753092 17757875 - 102013074 AGCD01015251;GBCQ01015489;XR_260179 MODEL 9036894 ncrna LOC102008813 uncharacterized LOC102008813 NW_004955452 14619352 14627007 - 102008813 AGCD01044473;GBDF01305185;XR_262691 MODEL 8843061 protein-coding Brip1 BRCA1 interacting DNA helicase 1 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); chromatin binding (ortholog); G-quadruplex unwinding activity (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to hypoxia (ortholog); cellular response to vitamin (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Alzheimer's disease (ortholog); Bone Metastasis (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955451 2705834 2820610 - 102010854 AGCD01043022;AGCD01043023;GBDK01359826;XM_013519414 XP_013374868 MODEL 8928722 pseudo LOC102013820 fatty acyl-CoA reductase 1 pseudogene NW_004955414 15096465 15098121 - 102013820 AGCD01015176 MODEL 9055830 pseudo LOC102019150 ribosome biogenesis protein BRX1 homolog pseudogene NW_004955411 12654807 12655867 + 102019150 AGCD01011851 MODEL 8850855 ncrna LOC102015674 uncharacterized LOC102015674 NW_004955447 17861375 17867429 + 102015674 AGCD01041142;GBBH01047912;XR_001235743;XR_262442 MODEL 8893523 pseudo LOC102005551 40S ribosomal protein S3a-like NW_004955451 2638931 2646792 + 102005551 AGCD01043017 MODEL 8821015 protein-coding LOC102007653 protocadherin gamma-A2 NW_004955415 12431046 12434469 - 102007653 AGCD01016196;GBDI01053094;XM_013512164 XP_013367618 MODEL 8997375 protein-coding Kcng2 potassium voltage-gated channel modifier subfamily G member 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN regulation of potassium ion transport (ortholog); ASSOCIATED WITH intellectual disability (ortholog) NW_004955402 62997807 63033813 + 102015264 AGCD01001651;AGCD01001652;AGCD01001653;GBCB01086119;XM_013512105 XP_013367559 MODEL 9007630 protein-coding Abhd2 abhydrolase domain containing 2, acylglycerol lipase ENCODES a protein that exhibits acetylesterase activity (ortholog); diacylglycerol lipase activity (ortholog); hormone binding (ortholog); INVOLVED IN acrosome reaction (ortholog); acylglycerol catabolic process (ortholog); negative regulation of cell migration (ortholog); FOUND IN acrosomal vesicle (ortholog); sperm flagellum (ortholog); sperm plasma membrane (ortholog) NW_004955416 15878972 15983322 - 102004383 AGCD01017346;AGCD01017347;AGCD01017348;GBDK01278438;XM_005381560 XP_005381617 MODEL 8705786 pseudo LOC102008073 39S ribosomal protein L47, mitochondrial pseudogene NW_004955411 8554284 8555056 + 102008073 AGCD01011730 MODEL 8792392 ncrna LOC102008437 uncharacterized LOC102008437 NW_004955501 6949506 6954792 - 102008437 AGCD01064202;GBDF01210166;XR_264256 MODEL 10285825 ncrna LOC106149917 uncharacterized LOC106149917 NW_004955457 780625 801104 - 106149917 AGCD01046714;AGCD01046715;GBDF01099763;XR_001236382 MODEL 8858834 protein-coding LOC102019158 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955413 9642246 9643405 - 102019158 AGCD01013908;XM_013511580 XP_013367034 MODEL 8789629 protein-coding Erbb2 erb-b2 receptor tyrosine kinase 2 ENCODES a protein that exhibits coreceptor activity (ortholog); ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); INVOLVED IN axon regeneration (ortholog); cell population proliferation (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; endometrial cancer pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); amblyopia (ortholog); Animal Disease Models (ortholog); FOUND IN cell projection; apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955451 14442816 14456009 + 102029927 AGCD01043554;GBDF01303586;XM_005394319 XP_005394376 MODEL 9060204 ncrna LOC102015308 uncharacterized LOC102015308 NW_004955470 3790799 3796782 + 102015308 AGCD01052711;AGCD01052712;GBCB01023210;XR_263468 MODEL 8871086 protein-coding Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); negative regulation of coagulation (ortholog); protein sulfation (ortholog); ASSOCIATED WITH melanoma (ortholog) NW_004955526 2418217 2652025 + 102003797 AGCD01069305;AGCD01069306;AGCD01069307;AGCD01069308;AGCD01069309;GBDF01075917;XM_005409760;XM_005409762;XM_005409763;XM_013507348;XM_013507349;XM_013507350 XP_005409817;XP_005409819;XP_005409820;XP_013362802;XP_013362803;XP_013362804 MODEL 8884151 protein-coding LOC102020939 testis-expressed protein 19.2-like NW_004955506 801430 803792 + 102020939 AGCD01065236;XM_013505963;XM_013505964;XM_013505965 XP_013361417;XP_013361418;XP_013361419 MODEL 8818059 protein-coding LOC102016073 melanoma-associated antigen 8-like NW_004955498 1940940 1953978 - 102016073 AGCD01062755;GBDF01223932;XM_013505521 XP_013360975 MODEL 9032521 protein-coding Il1r2 interleukin 1 receptor type 2 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of interleukin-1 alpha production (ortholog); negative regulation of interleukin-1-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH aggressive periodontitis (ortholog); allergic disease (ortholog); ankylosing spondylitis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955470 7518565 7562219 + 102018381 AGCD01052798;AGCD01052799;AGCD01052800;GBBH01144026;XM_005400763;XM_005400764;XM_005400766;XM_013522801;XM_013522802;XM_013522803;XR_001237023 XP_005400820;XP_005400821;XP_005400823;XP_013378255;XP_013378256;XP_013378257 MODEL 8749874 pseudo LOC102020202 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial pseudogene NW_004955406 12166989 12168622 + 102020202 AGCD01005909 MODEL 39132008 rrna 5S_rRNA 5S ribosomal RNA 39132255 rrna 5S_rRNA 5S ribosomal RNA 8710784 protein-coding Itm2a integral membrane protein 2A INVOLVED IN plasma cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog) NW_004955557 2235223 2243911 - 102025950 AGCD01073326;AGCD01073327;GBCQ01150407;XM_005412649;XM_013508828;XM_013508829;XM_013508830;XM_013508831 XP_005412706;XP_013364282;XP_013364283;XP_013364284;XP_013364285 MODEL 8890510 protein-coding Csf1 colony stimulating factor 1 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to parathyroid hormone stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); amyloidosis (ortholog); FOUND IN CSF1-CSF1R complex (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955435 13404236 13423059 + 102012469 AGCD01033200;GBCE01168984;XM_005388902;XM_005388903;XM_013516530 XP_005388959;XP_005388960;XP_013371984 MODEL 8913820 ncrna LOC102003727 uncharacterized LOC102003727 NW_004955453 14568514 14584297 - 102003727 AGCD01044871;GBDF01078382;XR_262740 MODEL 9049472 protein-coding Dph3 diphthamide biosynthesis 3 INVOLVED IN negative regulation of protein secretion (ortholog); protein histidyl modification to diphthamide (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955430 8544314 8550276 - 102027324 AGCD01029389;GBDK01028709;XM_005387450 XP_005387507 MODEL 39133661 misc_rna 7SK 7SK RNA 8972932 protein-coding Brix1 biogenesis of ribosomes BRX1 FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955426 20042274 20051606 + 102005397 AGCD01026560;GBDF01054030;XM_005386187 XP_005386244 MODEL 8812703 protein-coding LOC102011071 PRAME family member 8-like NW_004955618 112533 125114 - 102011071 AGCD01077296;AGCD01077297;GBDF01153091;XM_005415002 XP_005415059 MODEL 39134285 misc_rna 7SK 7SK RNA 8954667 protein-coding Dhdds dehydrodolichyl diphosphate synthase subunit ENCODES a protein that exhibits ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN dolichyl diphosphate biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH developmental delay and seizures with or without movement abnormalities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN dehydrodolichyl diphosphate synthase complex (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955452 5811053 5844992 + 102017944 AGCD01044055;AGCD01044056;AGCD01044057;AGCD01044058;GBDK01196360;XM_005394858;XM_013519674 XP_005394915;XP_013375128 MODEL 39134008 misc_rna 7SK 7SK RNA 8775776 protein-coding LOC102014571 solute carrier family 35 member E2-like NW_004955486 9225534 9241725 + 102014571 AGCD01059167;AGCD01059168;GBCQ01149092;GBCQ01149097;XM_005404197 XP_005404254 MODEL 8859831 protein-coding Ddc dopa decarboxylase ENCODES a protein that exhibits 5-hydroxy-L-tryptophan decarboxylase activity (ortholog); amino acid binding (ortholog); aromatic-L-amino-acid decarboxylase activity (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); cellular response to alkaloid (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH aromatic L-amino acid decarboxylase deficiency (ortholog); bipolar disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955456 3513779 3582851 + 102027270 AGCD01046276;GBCQ01100816;XM_005396601;XM_005396602;XM_005396603;XM_005396605;XM_013520640 XP_005396658;XP_005396659;XP_005396660;XP_005396662;XP_013376094 MODEL 8883953 protein-coding LOC102013462 uncharacterized LOC102013462 NW_004955402 4568211 4580597 + 102013462 AGCD01000124;AGCD01000125;GBBH01104032;XM_013518141 XP_013373595 MODEL 8926373 ncrna LOC102016436 uncharacterized LOC102016436 NW_004955402 16539771 16580734 - 102016436 AGCD01000481;AGCD01000482;AGCD01000483;GBDF01208470;XR_259055 MODEL 8865643 protein-coding LOC102011918 extensin-like NW_004955559 469599 475119 + 102011918 AGCD01073586;AGCD01073587;GBDF01008163;XM_005412762;XM_005412763;XM_013508926;XR_001232336 XP_005412819;XP_005412820;XP_013364380 MODEL 8978865 pseudo LOC102024436 40S ribosomal protein S25 pseudogene NW_004955463 6739320 6740084 + 102024436 AGCD01049695 MODEL 8789734 pseudo LOC102005556 ATP-binding cassette sub-family F member 2 pseudogene NW_004955406 13707389 13709243 + 102005556 AGCD01005949 MODEL 8743130 ncrna LOC102020533 uncharacterized LOC102020533 NW_004955460 4920865 4924481 - 102020533 AGCD01048444;GBDF01304791;XR_263030 MODEL 39131313 protein-coding CYFIP1 cytoplasmic FMR1 interacting protein 1 8791690 protein-coding CUNH11orf65 chromosome unknown C11orf65 homolog INVOLVED IN negative regulation of mitochondrial fission (ortholog); negative regulation of protein localization to mitochondrion (ortholog); obsolete negative regulation of protein targeting to mitochondrion (ortholog); ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955412 10533174 10567364 - 102006324 AGCD01012769;AGCD01012770;AGCD01012771;GBDI01370053;XM_005378039 XP_005378096 MODEL 8741680 protein-coding LOC102017580 actin-like NW_004955422 15156081 15198900 + 102017580 AGCD01022876;GBDF01053097;XM_013513883;XM_013513884;XM_013513885 XP_013369337;XP_013369338;XP_013369339 MODEL 8960550 protein-coding Eml5 EMAP like 5 NW_004955438 11225910 11366996 - 102010307 AGCD01035231;AGCD01035232;AGCD01035233;AGCD01035234;AGCD01035235;GBBH01176854;GBDK01223254;XM_013517167 XP_013372621 MODEL 8878951 protein-coding Abhd3 abhydrolase domain containing 3, phospholipase ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN phosphatidylcholine metabolic process (ortholog) NW_004955402 10316881 10355760 - 102018874 AGCD01000262;AGCD01000263;GBBH01092371;GBCE01099406;XM_013520539 XP_013375993 MODEL 9062220 ncrna LOC102009188 uncharacterized LOC102009188 NW_004955420 29161260 29164099 + 102009188 AGCD01021493;GBDJ01119670;XR_260772 MODEL 8995702 protein-coding Fbxo28 F-box protein 28 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 100 (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); kinetochore (ortholog); nucleoplasm (ortholog) NW_004955520 1169624 1198277 - 102010939 AGCD01068047;AGCD01068048;GBCQ01127305;XM_005409230;XM_005409231 XP_005409287;XP_005409288 MODEL 8779964 protein-coding Cpe carboxypeptidase E ENCODES a protein that exhibits carboxypeptidase activity (ortholog); cell adhesion molecule binding (ortholog); cobalt ion binding (ortholog); INVOLVED IN cardiac left ventricle morphogenesis (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH alcohol dependence (ortholog); atherosclerosis (ortholog); BDV Syndrome (ortholog); FOUND IN dendrite (ortholog); dense core granule (ortholog); extracellular region (ortholog) NW_004955403 39862893 39971902 - 102012049 AGCD01002649;AGCD01002650;AGCD01002651;AGCD01002652;GBBH01139891;GBDI01001661;XM_005373897 XP_005373954 MODEL 8998848 pseudo LOC102011081 SH3 domain-binding glutamic acid-rich-like protein pseudogene NW_004955406 24054455 24054920 + 102011081 AGCD01006188 MODEL 8873941 pseudo LOC102020535 ribonucleoside-diphosphate reductase subunit M2-like NW_004955460 10653679 10657934 - 102020535 AGCD01048599 MODEL 8992031 protein-coding Gpr88 G protein-coupled receptor 88 ENCODES a protein that exhibits beta2-adrenergic receptor activity (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH Childhood-Onset Chorea with Psychomotor Retardation (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955435 5268746 5271237 + 102023189 AGCD01032879;AGCD01032880;GBDI01344475;XM_005389100 XP_005389157 MODEL 9004164 protein-coding Ankef1 ankyrin repeat and EF-hand domain containing 1 ASSOCIATED WITH congenital myasthenic syndrome 18 (ortholog); developmental and epileptic encephalopathy 12 (ortholog) NW_004955415 19967234 19988725 + 102023585 AGCD01016482;GBDF01047742;XM_005380869;XM_013512109 XP_005380926;XP_013367563 MODEL 10135424 ncrna LOC106149918 uncharacterized LOC106149918 NW_004955457 611440 618723 - 106149918 AGCD01046712;XR_001236383 MODEL 8791048 protein-coding LOC102008817 C4b-binding protein alpha chain-like NW_004955406 42709359 42715864 + 102008817 AGCD01006714;GBBH01192869;XM_005375486 XP_005375543 MODEL 8850818 protein-coding Chtf18 chromosome transmission fidelity factor 18 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN cell development (ortholog); male meiotic nuclear division (ortholog); negative regulation of chromosome segregation (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955442 16414564 16423386 - 102014715 AGCD01037900;GBDF01192967;XM_005391601;XM_013517865 XP_005391658;XP_013373319 MODEL 8980250 protein-coding LOC102020940 zinc finger protein 14-like NW_004955429 18186043 18211596 - 102020940 AGCD01028884;AGCD01028885;AGCD01028886;GBCB01034512;XM_005387112;XM_005387113 XP_005387169;XP_005387170 MODEL 8960668 protein-coding LOC102014573 PRAME family member 12-like NW_004955486 380622 400830 + 102014573 AGCD01058843;AGCD01058844;AGCD01058845;AGCD01058846;XM_013504137 XP_013359591 MODEL 8707218 pseudo LOC102011469 60S ribosomal protein L36a-like NW_004955431 5509247 5509567 - 102011469 AGCD01030034 MODEL 8937117 protein-coding LOC102019162 protein FAM205A NW_004955472 1398923 1404948 + 102019162 AGCD01053390;GBDF01003693;XM_005401041 XP_005401098 MODEL 8701738 protein-coding LOC102015309 olfactory receptor 52K1 NW_004955414 20126801 20127745 + 102015309 AGCD01015358;XM_005380048 XP_005380105 MODEL 39131408 protein-coding KCNG2 potassium voltage-gated channel modifier subfamily G member 2 8714280 protein-coding Ids iduronate 2-sulfatase ENCODES a protein that exhibits calcium ion binding (ortholog); iduronate-2-sulfatase activity (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan catabolic process (ortholog); glycosaminoglycan catabolic process (ortholog); heparan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); genetic disease (ortholog); Lung Neoplasms (ortholog); FOUND IN lysosomal lumen (ortholog); lysosome (ortholog) NW_004955498 1863002 1886720 - 102021366 AGCD01062752;GBCE01115350;XM_005406397 XP_005406454 MODEL 39132267 rrna 5S_rRNA 5S ribosomal RNA 8717278 pseudo LOC102011922 protein kinase C iota type pseudogene NW_004955446 1525926 1528371 + 102011922 AGCD01039967;XM_005392599 MODEL 8705691 ncrna LOC102003728 uncharacterized LOC102003728 NW_004955454 12328311 12330494 + 102003728 AGCD01045409;XR_262791 MODEL 8912011 pseudo LOC102012703 transmembrane protease serine 11E-like NW_004955447 5103263 5144409 + 102012703 AGCD01040741;AGCD01040742;AGCD01040743 MODEL 8801313 protein-coding Il1rap interleukin 1 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-1 receptor activity (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-33-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); protein-containing complex (ortholog); synapse (ortholog) NW_004955420 17463493 17591054 - 102014674 AGCD01021022;AGCD01021023;AGCD01021024;GBDK01278591;XM_005383222;XM_013513507;XM_013513508;XM_013513509;XM_013513510 XP_005383279;XP_013368961;XP_013368962;XP_013368963;XP_013368964 MODEL 8846359 protein-coding LOC102008077 olfactory receptor 8B3 NW_004955412 25357388 25358344 - 102008077 AGCD01013151;XM_005378420 XP_005378477 MODEL 8866371 protein-coding CUNH11orf71 chromosome unknown C11orf71 homolog NW_004955412 15995551 15996159 - 102012415 AGCD01012888;GBDI01171582;XM_005415374 XP_005415431 MODEL 8923188 protein-coding Dhdh dihydrodiol dehydrogenase ENCODES a protein that exhibits D-xylose 1-dehydrogenase (NADP+) activity (ortholog); INVOLVED IN D-xylose catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); Prostatic Neoplasms (ortholog) NW_004955559 1706950 1719220 - 102028476 AGCD01073662;AGCD01073663;AGCD01073664;GBCQ01129279;XM_005412923 XP_005412980 MODEL 9044461 protein-coding LOC102013464 cyclin-dependent kinase inhibitor 1C-like NW_004958204 12 1007 - 102013464 AGCD01081600;GBBH01041050;GBCQ01066908;XM_005415240 XP_005415297 MODEL 9032219 pseudo LOC102007654 eukaryotic translation initiation factor 4 gamma 2 pseudogene NW_004955474 10505913 10506428 + 102007654 AGCD01054596;XM_005401468 MODEL 8984576 protein-coding LOC102009569 protocadherin-8 NW_004955404 50763263 50767330 + 102009569 AGCD01004536;AGCD01004537;GBDF01044218;XM_005374213;XM_013516742 XP_005374270;XP_013372196 MODEL 8811378 pseudo LOC102016074 hypoxanthine-guanine phosphoribosyltransferase-like NW_004955424 15342793 15344617 + 102016074 AGCD01024707 MODEL 39132009 rrna 5S_rRNA 5S ribosomal RNA 8890336 protein-coding Cpeb1 cytoplasmic polyadenylation element binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amenorrhea (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); glioblastoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 13963300 14038691 + 102007658 AGCD01017240;AGCD01017241;GBDI01295225;XM_005381479;XM_005381480;XM_005381481;XM_005381482 XP_005381536;XP_005381537;XP_005381538;XP_005381539 MODEL 8912692 protein-coding Ddhd1 DDHD domain containing 1 INVOLVED IN positive regulation of mitochondrial fission (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog) NW_004955409 10111299 10185603 + 102007519 AGCD01009459;AGCD01009460;GBDF01047416;XM_005376772;XM_013510321 XP_005376829;XP_013365775 MODEL 8969458 protein-coding LOC102014172 olfactory receptor 12-like NW_004955542 1281442 1282674 - 102014172 AGCD01071501;XM_013508127 XP_013363581 MODEL 8958736 protein-coding Fbxo3 F-box protein 3 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN response to lipopolysaccharide (ortholog); SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955422 12462329 12492030 + 102019923 AGCD01022795;AGCD01022796;GBDF01047754;XM_005384153;XM_005384154;XM_005384155 XP_005384210;XP_005384211;XP_005384212 MODEL 39133685 misc_rna 7SK 7SK RNA 8947773 pseudo LOC102021682 ATM interactor pseudogene NW_004955422 20655541 20656652 + 102021682 AGCD01023085 MODEL 10135390 protein-coding Brk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell motility (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; FOUND IN lamellipodium (ortholog); SCAR complex (ortholog) NW_004955561 1545921 1554423 + 106147451 AGCD01073856;GBDF01010733;XM_013509100 XP_013364554 MODEL 8950745 pseudo LOC102010305 protein archease pseudogene NW_004955532 1134983 1135508 + 102010305 AGCD01070166 MODEL 8927308 protein-coding Dph5 diphthamide biosynthesis 5 ENCODES a protein that exhibits diphthine methyl ester synthase activity (ortholog); INVOLVED IN protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH neurodevelopmental disorder with short stature, prominent forehead, and feeding difficulties (ortholog); FOUND IN cytosol (ortholog) NW_004955435 5618646 5659403 - 102008141 AGCD01032892;AGCD01032893;GBCE01096572;XM_005388806 XP_005388863 MODEL 9016046 pseudo LOC102008438 CDC42 small effector protein 1 pseudogene NW_004955503 2028864 2063030 - 102008438 AGCD01064593;AGCD01064594 MODEL 8926938 protein-coding Csf1r colony stimulating factor 1 receptor ENCODES a protein that exhibits cytokine binding (ortholog); macrophage colony-stimulating factor receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cardiac muscle cell proliferation (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); CSF1-CSF1R complex (ortholog) NW_004955415 4434486 4462505 + 102019056 AGCD01015970;GBCE01001881;XM_005380587 XP_005380644 MODEL 39134009 misc_rna 7SK 7SK RNA 9003734 ncrna LOC102003731 uncharacterized LOC102003731 NW_004955407 34830164 34933219 - 102003731 AGCD01007727;AGCD01007728;GBDF01191929;XR_259609 MODEL 8911392 ncrna LOC102015675 uncharacterized LOC102015675 NW_004955402 1143721 1150487 + 102015675 AGCD01000048;GBBH01111580;XR_001233981;XR_259010 MODEL 8937609 protein-coding Cyfip2 cytoplasmic FMR1 interacting protein 2 INVOLVED IN apoptotic process (ortholog); cell-cell adhesion (ortholog); dendrite extension (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 65 (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955408 11483891 11586628 + 102014747 AGCD01008311;AGCD01008312;GBBH01150816;XM_013508767;XM_013508777 XP_013364221;XP_013364231 MODEL 8743330 protein-coding Erbb3 erb-b2 receptor tyrosine kinase 3 ENCODES a protein that exhibits ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amblyopia (ortholog); Breast Neoplasms (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN apical part of cell; apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955458 3683126 3701752 + 102028937 AGCD01047336;AGCD01047337;GBBH01093140;GBDJ01015857;XM_005397284 XP_005397341 MODEL 10353052 protein-coding Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH epilepsy (ortholog); Hereditary Angioedema 8 (ortholog); pneumoconiosis (ortholog) NW_004955442 15337106 15344453 + 106146225 AGCD01037866;GBBH01165018;XM_005391503 XP_005391560 MODEL 9008890 protein-coding LOC102016440 uncharacterized protein C1orf198-like NW_004956284 273 5382 - 102016440 AGCD01079373;GBCQ01042040;GBDI01083284;XM_005415190 XP_005415247 MODEL 9055722 ncrna LOC102014575 uncharacterized LOC102014575 NW_004955491 6637390 6639705 + 102014575 AGCD01060559;GBBH01074594;XR_264040 MODEL 8761889 protein-coding LOC102024439 prostate and testis expressed protein 3 NW_004955412 26865766 26870441 + 102024439 AGCD01013223;GBDF01193345;XM_005378472;XR_001232855;XR_001232856 XP_005378529 MODEL 8863457 protein-coding LOC102020941 olfactory receptor 5AL1-like NW_004955511 1521558 1522538 + 102020941 AGCD01066370;XM_005408234 XP_005408291 MODEL 39134287 misc_rna 7SK 7SK RNA 8884290 protein-coding Egf epidermal growth factor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; ceramide signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); AIDS-Associated Nephropathy (ortholog); FOUND IN extracellular exosome (ortholog); extracellular space (ortholog); plasma membrane (ortholog) NW_004955496 325954 401430 - 102024024 AGCD01062225;GBCQ01008809;XM_005406183;XM_013505425 XP_005406240;XP_013360879 MODEL 8964994 protein-coding Kcng3 potassium voltage-gated channel modifier subfamily G member 3 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN regulation of potassium ion transmembrane transport (ortholog); regulation of potassium ion transport (ortholog); ASSOCIATED WITH Lynch syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955441 9813391 9859960 - 102022749 AGCD01037035;AGCD01037036;AGCD01037037;AGCD01037038;AGCD01037039;GBDF01114804;XM_005390919 XP_005390976 MODEL 8731622 protein-coding LOC102017582 sulfotransferase 1A1-like NW_004955493 6802353 6802959 - 102017582 AGCD01061141;GBDF01224060;XM_005405345 XP_005405402 MODEL 8928033 protein-coding LOC102013077 olfactory receptor 6-like NW_004955414 22675950 22676894 - 102013077 AGCD01015469;XM_005380510 XP_005380567 MODEL 8964925 pseudo LOC102013824 glycine cleavage system H protein, mitochondrial-like NW_004955477 9968046 9968555 + 102013824 AGCD01055688 MODEL 8991500 protein-coding LOC102009190 uncharacterized LOC102009190 NW_004955420 26585304 26590726 - 102009190 AGCD01021418;GBBH01189737;XM_013513347 XP_013368801 MODEL 8826518 protein-coding Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog) NW_004955409 37650220 37662950 - 102007865 AGCD01010533;GBDJ01073960;XM_005377129;XM_005377130 XP_005377186;XP_005377187 MODEL 8861756 ncrna LOC102020537 uncharacterized LOC102020537 NW_004955410 17663904 17685639 + 102020537 AGCD01010991;GBCQ01087275;XR_259847 MODEL 8863301 protein-coding LOC102014173 interferon alpha-inducible protein 27, mitochondrial NW_004955438 16133933 16141370 + 102014173 AGCD01035395;GBDK01002841;XM_013517200;XM_013517201;XM_013517202;XM_013517203 XP_013372654;XP_013372655;XP_013372656;XP_013372657 MODEL 10294489 ncrna LOC106149919 uncharacterized LOC106149919 NW_004955457 8893976 8911353 - 106149919 AGCD01046920;AGCD01046921;GBDJ01352635;XR_001236394;XR_001236395;XR_001236396;XR_001236397 MODEL 8839192 ncrna LOC102020203 uncharacterized LOC102020203 NW_004955407 4537146 4561971 - 102020203 AGCD01006881;AGCD01006882;AGCD01006883;GBDF01039252;XR_001230969;XR_259548 MODEL 8885512 ncrna LOC102008818 uncharacterized LOC102008818 NW_004955407 17028813 17032767 - 102008818 AGCD01007235;GBCB01103543;XR_259562 MODEL 8709971 protein-coding Itm2b integral membrane protein 2B ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway in absence of ligand (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); ASSOCIATED WITH cerebral amyloid angiopathy (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN extracellular space (ortholog); Golgi apparatus (ortholog); Golgi-associated vesicle membrane (ortholog) NW_004955431 1928706 1935010 + 102015136 AGCD01029919;GBCC01001251;XM_005387555 XP_005387612 MODEL 8787692 pseudo LOC102007660 calcyclin-binding protein-like NW_004955418 14381275 14381936 + 102007660 AGCD01019075 MODEL 8772249 protein-coding Gpr89a G protein-coupled receptor 89A ENCODES a protein that exhibits voltage-gated monoatomic anion channel activity (ortholog); INVOLVED IN intracellular pH reduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); skin development (ortholog); FOUND IN Golgi cisterna membrane (ortholog); Golgi-associated vesicle membrane (ortholog) NW_004955568 436817 493188 - 102009771 AGCD01074514;AGCD01074515;AGCD01074516;AGCD01074517;AGCD01074518;AGCD01074519;AGCD01074520;GBDF01126235;XM_005413448;XM_005413449;XM_005413450 XP_005413505;XP_005413506;XP_005413507 MODEL 9055627 pseudo LOC102009574 40S ribosomal protein S12 pseudogene NW_004955406 11910786 11911430 - 102009574 AGCD01005898 MODEL 8768992 protein-coding Dhfr dihydrofolate reductase ENCODES a protein that exhibits dihydrofolate reductase activity (ortholog); dihydrofolic acid binding (ortholog); folate reductase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); axon regeneration (ortholog); dihydrofolate metabolic process (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; dopa responsive dystonia pathway; folate cycle metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955418 29274170 29283028 + 102014049 AGCD01019455;GBCE01039261;XM_005382314 XP_005382371 MODEL 8729245 protein-coding Ddhd2 DDHD domain containing 2 ENCODES a protein that exhibits triacylglycerol lipase activity (ortholog); INVOLVED IN lipid droplet organization (ortholog); locomotory behavior (ortholog); positive regulation of mitochondrial fission (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 54 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955463 13836401 13856430 + 102022059 AGCD01049891;AGCD01049892;GBDF01119212;GBDI01173737;XM_013521496 XP_013376950 MODEL 39132268 rrna 5S_rRNA 5S ribosomal RNA 8714068 protein-coding LOC102011483 tryptase-like NW_004955442 16039127 16040641 + 102011483 AGCD01037891;GBCE01068870;XM_005391590 XP_005391647 MODEL 8756139 ncrna LOC102008079 uncharacterized LOC102008079 NW_004955413 2802254 2809284 + 102008079 AGCD01013559;GBCB01093657;XR_001233052;XR_260052 MODEL 8902344 pseudo LOC102011085 dynein light chain 1, cytoplasmic-like NW_004955407 27230910 27231275 + 102011085 AGCD01007548 MODEL 8702359 protein-coding Eml6 EMAP like 6 ASSOCIATED WITH High Myopia (ortholog); keratoconus (ortholog) NW_004955424 28125287 28461646 - 102014262 AGCD01025147;AGCD01025148;AGCD01025149;AGCD01025150;AGCD01025151;AGCD01025152;AGCD01025153;AGCD01025154;AGCD01025155;AGCD01025156;AGCD01025157;AGCD01025158;AGCD01025159;AGCD01025160;AGCD01025161;AGCD01025162;AGCD01025163;AGCD01025164;AGCD01025165;AGCD01025166;AGCD01025167;AGCD01025168;GBDF01277097;XM_013514622;XM_013514623;XM_013514624;XM_013514625;XM_013514626;XR_001234170 XP_013370076;XP_013370077;XP_013370078;XP_013370079;XP_013370080 MODEL 39131297 protein-coding IL1RAPL1 interleukin 1 receptor accessory protein like 1 8719291 pseudo LOC102013084 cyclic AMP-dependent transcription factor ATF-4 pseudogene NW_004955417 10565016 10567924 - 102013084 AGCD01018079 MODEL 8789204 ncrna LOC102009200 uncharacterized LOC102009200 NW_004955505 3088445 3096275 + 102009200 AGCD01065015;GBDF01203512;XR_264305 MODEL 8979090 protein-coding LOC102005559 FUN14 domain-containing protein 1-like NW_004955406 23472527 23473294 - 102005559 AGCD01006171;GBDF01050560;XM_005375060 XP_005375117 MODEL 9014314 protein-coding Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 INVOLVED IN behavioral fear response (ortholog); equilibrioception (ortholog); locomotor rhythm (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 6269168 6656763 - 102014966 AGCD01043201;AGCD01043202;AGCD01043203;AGCD01043204;AGCD01043205;AGCD01043206;AGCD01043207;AGCD01043208;GBDJ01075914;XM_005394074;XM_005394075;XM_013519405;XM_013519406;XM_013519407;XM_013519408 XP_005394131;XP_005394132;XP_013374859;XP_013374860;XP_013374861;XP_013374862 MODEL 8812226 protein-coding LOC102019163 uncharacterized LOC102019163 NW_004955414 24573632 24634114 + 102019163 AGCD01015548;AGCD01015549;AGCD01015550;XM_005380524 XP_005380581 MODEL 8986327 ncrna LOC102016076 uncharacterized LOC102016076 NW_004955425 14190112 14195622 - 102016076 AGCD01025554;GBDF01281343;XR_261140;XR_261141;XR_261142 MODEL 8908413 protein-coding LOC102015312 olfactory receptor 481-like NW_004955414 23472089 23473030 + 102015312 AGCD01015499;XM_005380516 XP_005380573 MODEL 8909923 ncrna LOC102021687 uncharacterized LOC102021687 NW_004955500 6724671 6728915 + 102021687 AGCD01063892;GBDJ01218162;XR_001231489 MODEL 8794673 protein-coding LOC102011927 uncharacterized LOC102011927 NW_004955450 3259515 3262466 + 102011927 AGCD01042426;GBDF01042694;XM_005393550 XP_005393607 MODEL 8758405 protein-coding Hs6st1 heparan sulfate 6-O-sulfotransferase 1 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); labyrinthine layer blood vessel development (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism 15 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955459 2273100 2310993 + 102017850 AGCD01047988;GBCB01024627;GBDI01125322;XM_005397559 XP_005397616 MODEL 39133686 misc_rna 7SK 7SK RNA 8933570 pseudo LOC102010306 L-lactate dehydrogenase A chain pseudogene NW_004955437 1653118 1654576 - 102010306 AGCD01034224 MODEL 8738552 protein-coding LOC102014580 interferon-induced guanylate-binding protein 1-like NW_004955423 5323996 5335666 + 102014580 AGCD01023560;XM_013514375 XP_013369829 MODEL 8944361 protein-coding Fbxo30 F-box protein 30 INVOLVED IN chromatin organization (ortholog); chromosome condensation (ortholog); chromosome segregation (ortholog) NW_004955436 14837162 14842615 + 102029439 AGCD01033878;GBDF01051890;GBDJ01386563;XM_005389230 XP_005389287 MODEL 8710174 pseudo LOC102024440 elongation factor 1-alpha 1 pseudogene NW_004955466 13847858 13849554 + 102024440 AGCD01051188;XR_263320 MODEL 8719785 pseudo LOC102008440 high mobility group protein B1-like NW_004955427 3052920 3061332 - 102008440 AGCD01026912 MODEL 8793681 protein-coding Dph6 diphthamine biosynthesis 6 ENCODES a protein that exhibits diphthine-ammonia ligase activity (ortholog) NW_004955416 2701724 2860330 - 102030190 AGCD01016862;GBCQ01121510;XM_005381183;XM_013512634;XM_013512635;XM_013512636 XP_005381240;XP_013368088;XP_013368089;XP_013368090 MODEL 39134010 misc_rna 7SK 7SK RNA 8747290 protein-coding Csf2 colony stimulating factor 2 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); agranulocytosis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955408 3452009 3454255 + 102026504 AGCD01008056;GBDK01361855;XM_005376094 XP_005376151 MODEL 8853396 protein-coding CUNH11orf87 chromosome unknown C11orf87 homolog NW_004955412 11447935 11455153 + 102008205 AGCD01012795;XM_005378044;XM_005378045;XM_005378046;XM_005378047 XP_005378101;XP_005378102;XP_005378103;XP_005378104 MODEL 8963431 ncrna LOC102013467 uncharacterized LOC102013467 NW_004955404 29028733 29038238 + 102013467 AGCD01003968;GBDF01118402;XR_001235108 MODEL 8893979 protein-coding LOC102020539 cytohesin-3-like NW_004955463 5346764 5348878 - 102020539 AGCD01049638;XM_013521492 XP_013376946 MODEL 39132010 rrna 5S_rRNA 5S ribosomal RNA 8876625 pseudo LOC102015680 COP9 signalosome complex subunit 8-like NW_004955596 644486 646382 + 102015680 AGCD01076525 MODEL 8796326 protein-coding LOC102017584 interferon-induced protein with tetratricopeptide repeats 1B NW_004955425 3606058 3611013 - 102017584 AGCD01025294;GBBH01026311;XM_005385853 XP_005385910 MODEL 9050585 protein-coding Kcng4 potassium voltage-gated channel modifier subfamily G member 4 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN regulation of potassium ion transmembrane transport (ortholog); regulation of potassium ion transport (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955564 84772 99125 + 102018236 AGCD01074187;GBBH01085436;XM_005413218 XP_005413275 MODEL 10353116 ncrna LOC106149920 uncharacterized LOC106149920 NW_004955457 8966562 9000955 - 106149920 AGCD01046924;AGCD01046925;GBDF01305887;XR_001236398 MODEL 8718710 protein-coding Cpeb2 cytoplasmic polyadenylation element binding protein 2 ENCODES a protein that exhibits GTPase inhibitor activity (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); negative regulation of cytoplasmic translation (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955480 8853449 8906859 - 102019499 AGCD01056733;GBCQ01006152;GBDK01277233;XM_013503330 XP_013358784 MODEL 8897015 protein-coding LOC102003733 E3 ubiquitin-protein ligase TRIM50 NW_004955456 14320894 14328341 + 102003733 AGCD01046639;GBDF01267146;XM_005396793;XM_005396795;XM_013520599 XP_005396850;XP_005396852;XP_013376053 MODEL 9058021 ncrna LOC102016447 uncharacterized LOC102016447 NW_004955407 25449838 25458467 - 102016447 AGCD01007510;GBDF01226215;XR_001231470;XR_259581;XR_259583 MODEL 9007734 ncrna LOC102007661 uncharacterized LOC102007661 NW_004955482 3985965 4000816 - 102007661 AGCD01057276;AGCD01057277;AGCD01057278;GBDF01089354;XR_001231002;XR_001231003;XR_263828 MODEL 8876545 ncrna LOC102012707 uncharacterized LOC102012707 NW_004955584 1044910 1047589 + 102012707 AGCD01075977;GBBH01222868;XR_001232516 MODEL 39134289 misc_rna 7SK 7SK RNA 8940189 protein-coding Idua alpha-L-iduronidase ENCODES a protein that exhibits L-iduronidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); bone development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); gastric ulcer (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); lysosomal lumen (ortholog); lysosome (ortholog) NW_004955514 474830 488007 + 102011470 AGCD01067011;AGCD01067012;GBCE01171800;GBDJ01321944;XM_005408686 XP_005408743 MODEL 8703255 protein-coding Gprasp1 G protein-coupled receptor associated sorting protein 1 INVOLVED IN endosome to lysosome transport (ortholog); G protein-coupled receptor catabolic process (ortholog); FOUND IN cytosol (ortholog) NW_004955548 132373 137817 + 102020290 AGCD01072319;GBDI01177597;XM_005411968 XP_005412025 MODEL 8997536 pseudo LOC102020944 40S ribosomal protein S3a-like NW_004955432 1189191 1190112 + 102020944 AGCD01030586 MODEL 8725587 protein-coding Brme1 break repair meiotic recombinase recruitment factor 1 ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); FOUND IN chromosome (ortholog); site of double-strand break (ortholog) NW_004955415 32652978 32667873 - 102015838 AGCD01016730;GBBH01138965;XM_013512198;XM_013512199;XM_013512200;XM_013512201;XM_013512202;XM_013512203;XM_013512204;XM_013512205;XM_013512206;XM_013512207 XP_013367652;XP_013367653;XP_013367654;XP_013367655;XP_013367656;XP_013367657;XP_013367658;XP_013367659;XP_013367660;XP_013367661 MODEL 8970391 protein-coding Ddi1 DDI proteasomal shuttling factor 1 INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); regulation of DNA stability (ortholog) NW_004955412 6980778 6982453 + 102020780 AGCD01012685;GBDF01003996;XM_013511229 XP_013366683 MODEL 9016101 pseudo LOC102011930 tripartite motif-containing protein 59-like NW_004955450 13491725 13492879 - 102011930 AGCD01042735 MODEL 39133688 misc_rna 7SK 7SK RNA 8717885 protein-coding LOC102016449 mucin-17 NW_004955456 16203150 16214796 - 102016449 AGCD01046694;GBDF01024236;XM_005396900 XP_005396957 MODEL 8726235 protein-coding LOC102014181 olfactory receptor 4K14-like NW_004955550 359157 360092 + 102014181 AGCD01072495;XM_005412030 XP_005412087 MODEL 8705126 protein-coding Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lipase activator activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); phosphatidic acid biosynthetic process (ortholog); positive regulation of lipid catabolic process (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 1 (ortholog); Chanarin-Dorfman syndrome (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog) NW_004955420 27484500 27508360 - 102013938 AGCD01021454;GBDF01266672;XM_005383485 XP_005383542 MODEL 8878298 protein-coding Cygb cytoglobin ENCODES a protein that exhibits carbon monoxide binding (ortholog); catalase activity (ortholog); fatty acid peroxidase activity (ortholog); INVOLVED IN fatty acid oxidation (ortholog); negative regulation of collagen biosynthetic process (ortholog); negative regulation of fibroblast migration (ortholog); ASSOCIATED WITH chronic pancreatitis (ortholog); Experimental Liver Cirrhosis (ortholog); extrahepatic cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuron projection (ortholog) NW_004955506 5766006 5775722 + 102023381 AGCD01065387;GBBH01228785;XM_005407427;XM_013506123;XM_013506124 XP_005407484;XP_013361577;XP_013361578 MODEL 8921813 protein-coding LOC102013091 zinc finger protein 709-like NW_004955420 30017669 30021517 - 102013091 AGCD01021527;AGCD01021528;GBDK01132241;XM_013513351 XP_013368805 MODEL 9044312 protein-coding LOC102008819 glutathione S-transferase theta-4-like NW_004955455 8339972 8366449 - 102008819 AGCD01045887;AGCD01045888;GBBH01060604;XM_005396410;XM_005396411;XM_005396412;XM_013520443 XP_005396467;XP_005396468;XP_005396469;XP_013375897 MODEL 8708824 protein-coding Itm2c integral membrane protein 2C ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); neuron differentiation (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); FOUND IN Golgi apparatus (ortholog); lysosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955453 4546736 4557649 - 102025537 AGCD01044692;GBCQ01010113;XM_005395408;XM_005395409 XP_005395465;XP_005395466 MODEL 9025720 protein-coding LOC102009577 keratin-associated protein 20-2-like NW_004955407 30220342 30220545 + 102009577 AGCD01007628;XM_005375648 XP_005375705 MODEL 9066269 protein-coding Dhodh dihydroorotate dehydrogenase (quinone) ENCODES a protein that exhibits dihydroorotase activity (ortholog); dihydroorotate dehydrogenase (quinone) activity (ortholog); dihydroorotate dehydrogenase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); 'de novo' UMP biosynthetic process (ortholog); female pregnancy (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH beta thalassemia (ortholog); erythroleukemia (ortholog); Experimental Arthritis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955484 4699743 4713466 + 102017238 AGCD01058230;GBDJ01191379;XM_005403527 XP_005403584 MODEL 39132271 rrna 5S_rRNA 5S ribosomal RNA 8937159 ncrna LOC102021688 uncharacterized LOC102021688 NW_004955425 15981368 16020243 - 102021688 AGCD01025594;GBDF01249930;XR_001234295;XR_261147;XR_261148;XR_261149;XR_261150 MODEL 8757477 pseudo LOC102013825 60S ribosomal protein L7a pseudogene NW_004955416 19108776 19109577 + 102013825 AGCD01017415 MODEL 8728965 pseudo LOC102010310 eukaryotic translation initiation factor 3 subunit F-like NW_004955441 1151626 1157056 - 102010310 AGCD01036747 MODEL 8889623 protein-coding Cpeb3 cytoplasmic polyadenylation element binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to amino acid stimulus (ortholog); long-term memory (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical dendrite (ortholog); CCR4-NOT complex (ortholog); cytoplasm (ortholog) NW_004955425 1032446 1224300 + 102006933 AGCD01025215;AGCD01025216;AGCD01025217;AGCD01025218;GBDF01010045;XM_013514850;XM_013514851 XP_013370304;XP_013370305 MODEL 8700630 ncrna LOC102014582 uncharacterized LOC102014582 NW_004955497 1976079 1981871 + 102014582 AGCD01062484;GBDF01225528;XR_001231438 MODEL 8756057 protein-coding Chtf8 chromosome transmission fidelity factor 8 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN positive regulation of DNA-directed DNA polymerase activity (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog) NW_004955484 7539887 7542395 + 102004606 AGCD01058337;GBCE01097337;XM_013503977 XP_013359431 MODEL 8873605 protein-coding LOC102008080 cytochrome c-like NW_004955413 7665162 7665698 - 102008080 AGCD01013828;GBDF01269962;XM_005378936 XP_005378993 MODEL 9031385 ncrna LOC102020544 uncharacterized LOC102020544 NW_004955412 6553663 6556789 - 102020544 AGCD01012677;GBDF01148663;XR_259981 MODEL 8892998 ncrna LOC102009202 uncharacterized LOC102009202 NW_004955508 2070981 2129438 - 102009202 AGCD01065779;AGCD01065780;AGCD01065781;AGCD01065782;GBDF01234233;XR_001231648;XR_001231649;XR_001231650;XR_001231651;XR_001231652;XR_264387 MODEL 8929542 protein-coding Dph7 diphthamide biosynthesis 7 INVOLVED IN protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH prostate cancer (ortholog) NW_004955513 5438746 5449461 - 102017149 AGCD01066969;GBDJ01007252;XM_005408623;XM_013506662;XR_001231740 XP_005408680;XP_013362116 MODEL 9041985 protein-coding LOC102020204 low affinity sodium-glucose cotransporter-like NW_004955455 6532784 6667672 - 102020204 AGCD01045801;AGCD01045802;AGCD01045803;GBDF01138871;XM_013520389;XM_013520390 XP_013375843;XP_013375844 MODEL 39132011 rrna 5S_rRNA 5S ribosomal RNA 8756733 protein-coding Il1rapl2 interleukin 1 receptor accessory protein like 2 INVOLVED IN regulation of presynapse assembly (ortholog); FOUND IN glutamatergic synapse (ortholog) NW_004955548 1462746 2623622 + 102005640 AGCD01072376;AGCD01072377;AGCD01072378;AGCD01072379;AGCD01072380;AGCD01072381;AGCD01072382;AGCD01072383;AGCD01072384;AGCD01072385;AGCD01072386;AGCD01072387;AGCD01072388;AGCD01072389;AGCD01072390;AGCD01072391;AGCD01072392;AGCD01072393;AGCD01072394;AGCD01072395;AGCD01072396;AGCD01072397;AGCD01072398;AGCD01072399;AGCD01072400;AGCD01072401;AGCD01072402;AGCD01072403;AGCD01072404;AGCD01072405;AGCD01072406;AGCD01072407;XM_005412011 XP_005412068 MODEL 8817419 ncrna LOC102015314 uncharacterized LOC102015314 NW_004955416 14878846 14890874 - 102015314 AGCD01017286;GBCQ01113980;XR_260386 MODEL 8779289 protein-coding Ankfy1 ankyrin repeat and FYVE domain containing 1 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); endosomal vesicle fusion (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH Charlevoix-Saguenay spastic ataxia (ortholog); urinary bladder cancer (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955467 12644070 12734546 + 102014762 AGCD01051655;AGCD01051656;AGCD01051657;AGCD01051658;GBBH01166066;GBDI01129342;XM_013522066 XP_013377520 MODEL 8994895 ncrna LOC102007675 uncharacterized LOC102007675 NW_004955425 7720216 7730019 + 102007675 AGCD01025391;AGCD01025392;GBDK01047433;XR_261136 MODEL 8849439 protein-coding Fbxo31 F-box protein 31 ENCODES a protein that exhibits cyclin binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cellular response to oxidative stress (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 45 (ortholog); congenital nongoitrous hypothyroidism 2 (ortholog); spastic cerebral palsy (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955541 1811010 1828734 - 102025942 AGCD01071388;GBCB01007487;XM_005411001;XM_013507983 XP_005411058;XP_013363437 MODEL 9009844 pseudo LOC102016450 60S ribosomal protein L32 pseudogene NW_004955457 8712306 8712791 - 102016450 AGCD01046916 MODEL 8927000 pseudo LOC102021690 zinc finger protein 250-like NW_004955427 17506682 17508299 + 102021690 AGCD01027331 MODEL 8863835 ncrna LOC102005562 uncharacterized LOC102005562 NW_004955455 10714691 10715717 + 102005562 AGCD01045961;GBDJ01194372;XR_262853 MODEL 8707882 protein-coding LOC102011087 olfactory receptor 9K2-like NW_004955458 2223510 2224451 + 102011087 AGCD01047218;XM_005397237 XP_005397294 MODEL 8952215 pseudo LOC102015681 putative 60S ribosomal protein L13a protein RPL13AP3 NW_004955402 7292136 7295989 - 102015681 AGCD01000170 MODEL 8973084 protein-coding LOC102011936 nuclear pore complex protein Nup50-like NW_004955801 1035 19256 - 102011936 AGCD01078375;GBDK01393605;XM_005415113;XM_013510195;XM_013510196 XP_005415170;XP_013365649;XP_013365650 MODEL 8930882 protein-coding Erbb4 erb-b2 receptor tyrosine kinase 4 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac muscle tissue regeneration (ortholog); cell fate commitment (ortholog); cell migration (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amblyopia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 10 (ortholog); FOUND IN basolateral plasma membrane (ortholog); caveola (ortholog); dendrite (ortholog) NW_004955457 3177905 4236152 + 102026721 AGCD01046765;AGCD01046766;AGCD01046767;AGCD01046768;AGCD01046769;AGCD01046770;AGCD01046771;AGCD01046772;AGCD01046773;AGCD01046774;AGCD01046775;AGCD01046776;AGCD01046777;AGCD01046778;AGCD01046779;AGCD01046780;AGCD01046781;AGCD01046782;AGCD01046783;AGCD01046784;AGCD01046785;AGCD01046786;AGCD01046787;GBCQ01117703;GBCQ01117704;XM_005396937;XM_005396938;XM_005396939;XM_005396940;XM_013520736 XP_005396994;XP_005396995;XP_005396996;XP_005396997;XP_013376190 MODEL 8816720 protein-coding LOC102014185 carbonic anhydrase 15-like NW_004955442 18940328 18943376 + 102014185 AGCD01038024;GBCQ01098976;XM_005391793;XM_005391795;XM_005391796;XM_005391797 XP_005391850;XP_005391852;XP_005391853;XP_005391854 MODEL 8740819 pseudo LOC102003734 RWD domain-containing protein 1 pseudogene NW_004955457 11994927 11995651 + 102003734 AGCD01046997 MODEL 8843090 pseudo LOC102011486 RNA-binding protein 4B pseudogene NW_004955446 4882192 4882609 - 102011486 AGCD01040049 MODEL 8731983 protein-coding Cpeb4 cytoplasmic polyadenylation element binding protein 4 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to decreased oxygen levels (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH liver cirrhosis (ortholog); portal hypertension (ortholog); primary biliary cholangitis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955408 26535281 26597317 + 102003416 AGCD01008668;AGCD01008669;GBDI01187363;XM_005376353;XM_005376354;XM_005376356 XP_005376410;XP_005376411;XP_005376413 MODEL 8792615 protein-coding Cylc1 cylicin 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); maintenance of cell number (ortholog); ASSOCIATED WITH male infertility (ortholog); X-linked spermatogenic failure 8 (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal membrane (ortholog); acrosomal vesicle (ortholog) NW_004955529 2996909 3052053 + 102020952 AGCD01069777;AGCD01069778;AGCD01069779;AGCD01069780;AGCD01069781;AGCD01069782;GBDF01089424;XM_005410077;XM_005410078 XP_005410134;XP_005410135 MODEL 39134291 misc_rna 7SK 7SK RNA 8977070 ncrna LOC102020209 uncharacterized LOC102020209 NW_004955457 10030162 10042819 + 102020209 AGCD01046947;GBCQ01035883;XR_262930 MODEL 8772801 protein-coding Itpa inosine triphosphatase ENCODES a protein that exhibits dITP diphosphatase activity (ortholog); identical protein binding (ortholog); nucleoside triphosphate diphosphatase activity (ortholog); INVOLVED IN chromosome organization (ortholog); ITP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH anemia (ortholog); anodontia (ortholog); Chemotherapy-Induced Febrile Neutropenia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955415 14106786 14121975 + 102024997 AGCD01016286;AGCD01016287;AGCD01016288;GBBH01145430;XM_005380786 XP_005380843 MODEL 8847881 protein-coding Ier2 immediate early response 2 INVOLVED IN cell motility (ortholog); neuron differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH childhood acute myeloid leukemia (ortholog); colorectal adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 32159762 32161530 + 102030303 AGCD01016712;GBDK01079819;XM_005381057 XP_005381114 MODEL 8848573 protein-coding Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic ENCODES a protein that exhibits dolichyl-phosphate beta-D-mannosyltransferase activity (ortholog); INVOLVED IN dolichol phosphate mannose biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ie (ortholog); genetic disease (ortholog); FOUND IN dolichol-phosphate-mannose synthase complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955445 7472579 7492632 + 102024171 AGCD01039542;GBDF01043282;XM_005392310;XM_005392311 XP_005392367;XP_005392368 MODEL 9036153 protein-coding Brms1 BRMS1 transcriptional repressor and anoikis regulator ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of anoikis (ortholog); positive regulation of protein deacetylation (ortholog); ASSOCIATED WITH invasive ductal carcinoma (ortholog); Neoplasm Invasiveness (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 18981984 18989730 + 102014370 AGCD01022970;GBDJ01187942;XM_005384413;XM_005384415;XM_005384417;XM_013514159 XP_005384470;XP_005384472;XP_005384474;XP_013369613 MODEL 8968914 pseudo LOC102015317 ATP-dependent RNA helicase DDX50 pseudogene NW_004955417 13310137 13312256 + 102015317 AGCD01018175 MODEL 8966292 protein-coding Emp1 epithelial membrane protein 1 INVOLVED IN apoptotic process (ortholog); bleb assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); Spontaneous Abortions (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 10062621 10081551 + 102022803 AGCD01013925;GBCE01001043;XM_005378983 XP_005379040 MODEL 39133706 misc_rna 7SK 7SK RNA 8984718 ncrna LOC102013827 uncharacterized LOC102013827 NW_004955417 7843248 7844073 - 102013827 AGCD01018017;GBBH01057314;XR_260464 MODEL 8791905 ncrna LOC102013469 uncharacterized LOC102013469 NW_004955405 26349233 26375138 + 102013469 AGCD01005201;GBDK01414416;XR_259396 MODEL 8717962 ncrna LOC102017591 uncharacterized LOC102017591 NW_004955510 6375997 6377249 - 102017591 AGCD01066306;GBDF01087880;XR_264412 MODEL 8943657 protein-coding Ddi2 DDI proteasomal shuttling factor 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); protein processing (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955527 2498211 2534768 - 102010728 AGCD01069439;AGCD01069440;AGCD01069441;AGCD01069442;AGCD01069443;AGCD01069444;GBCE01085284;GBDJ01084867;XM_005409866 XP_005409923 MODEL 10289397 ncrna LOC106149921 uncharacterized LOC106149921 NW_004955457 9000284 9008289 + 106149921 AGCD01046925;GBDJ01393429;XR_001236399 MODEL 8836963 protein-coding LOC102019169 translation initiation factor IF-2-like NW_004955417 15890315 15897505 + 102019169 AGCD01018246;GBDF01147172;XM_013512712 XP_013368166 MODEL 9059575 protein-coding Csf2rb colony stimulating factor 2 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); granulocyte-macrophage colony-stimulating factor signaling pathway (ortholog); interleukin-3-mediated signaling pathway (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-3 signaling pathway; interleukin-5 signaling pathway; ASSOCIATED WITH asthma (ortholog); brain ischemia (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 23442417 23465093 + 102023345 AGCD01014331;GBDJ01276297;XM_005379171;XM_005379172;XM_005379173;XM_005379174;XM_013511574 XP_005379228;XP_005379229;XP_005379230;XP_005379231;XP_013367028 MODEL 8839198 ncrna LOC102020545 uncharacterized LOC102020545 NW_004955412 13502529 13517124 + 102020545 AGCD01012840;GBDF01189310;XR_001232922;XR_001232923;XR_001232924 MODEL 8832907 ncrna LOC102009203 uncharacterized LOC102009203 NW_004955429 19713878 19748003 - 102009203 AGCD01028967;AGCD01028968;GBDK01115535;XR_001234525;XR_261366;XR_261367 MODEL 8849123 protein-coding LOC102016078 lysozyme-like protein 1 NW_004955429 21543970 21562921 + 102016078 AGCD01029005;AGCD01029006;GBDF01045217;XM_005387179;XM_005387180;XM_005387181 XP_005387236;XP_005387237;XP_005387238 MODEL 8901470 protein-coding LOC102012708 uncharacterized LOC102012708 NW_004955449 15463379 15557849 - 102012708 AGCD01042194;AGCD01042195;AGCD01042196;AGCD01042197;GBDK01148150;XM_005393396;XM_005393397;XR_001235813;XR_001235814;XR_262508;XR_262509 XP_005393453;XP_005393454 MODEL 8802559 protein-coding Egfl6 EGF like domain multiple 6 INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog) NW_004955519 4557007 4616095 - 102027780 AGCD01067986;AGCD01067987;AGCD01067988;GBDJ01301779;XM_005409208 XP_005409265 MODEL 8769280 protein-coding LOC102020948 putative olfactory receptor 2W6 NW_004955524 152296 153240 - 102020948 AGCD01068668;XM_005409655 XP_005409712 MODEL 8910867 ncrna LOC102024442 uncharacterized LOC102024442 NW_004955413 29320976 29322513 + 102024442 AGCD01014580;GBDF01002331;XR_260124 MODEL 9047097 protein-coding Hs6st2 heparan sulfate 6-O-sulfotransferase 2 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Paganini-Miozzo syndrome (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955473 2002475 2291868 + 102025998 AGCD01053898;AGCD01053899;GBCB01055654;XM_005401205;XM_005401206;XM_005401207;XM_005401208;XM_005401209;XM_013523047 XP_005401262;XP_005401263;XP_005401264;XP_005401265;XP_005401266;XP_013378501 MODEL 39134011 misc_rna 7SK 7SK RNA 39132012 rrna 5S_rRNA 5S ribosomal RNA 8796740 pseudo LOC102010312 transcription and mRNA export factor ENY2 pseudogene NW_004955553 1476433 1476725 - 102010312 AGCD01072886 MODEL 8761204 protein-coding Cped1 cadherin like and PC-esterase domain containing 1 ASSOCIATED WITH Creutzfeldt-Jakob disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955479 2782057 3039440 + 102007010 AGCD01056282;AGCD01056283;AGCD01056284;AGCD01056285;AGCD01056286;AGCD01056287;AGCD01056288;AGCD01056289;GBCE01065059;XM_005402311;XM_005402312;XR_001230879 XP_005402368;XP_005402369 MODEL 39134293 misc_rna 7SK 7SK RNA 8853880 protein-coding CUNH11orf91 chromosome unknown C11orf91 homolog NW_004955422 12536515 12539332 + 102021136 AGCD01022796;GBDF01043279;XM_005384157 XP_005384214 MODEL 8705998 pseudo LOC102014586 phospholipase DDHD2 pseudogene NW_004955502 6145208 6147408 + 102014586 AGCD01064394 MODEL 8751829 protein-coding Kcnh1 potassium voltage-gated channel subfamily H member 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); calmodulin binding (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); monoatomic ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); colorectal adenocarcinoma (ortholog); Developmental Disease (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); cell surface (ortholog) NW_004955489 1176615 1549880 + 102016924 AGCD01059830;AGCD01059831;AGCD01059832;AGCD01059833;AGCD01059834;AGCD01059835;AGCD01059836;AGCD01059837;AGCD01059838;AGCD01059839;AGCD01059840;AGCD01059841;AGCD01059842;GBDF01207581;XM_005404511;XM_005404512;XM_013504482 XP_005404568;XP_005404569;XP_013359936 MODEL 8777773 pseudo LOC102016456 phosphoglycerate kinase 1-like NW_004955410 16272427 16273969 - 102016456 AGCD01010954;XR_259840 MODEL 8973961 protein-coding Abhd6 abhydrolase domain containing 6, acylglycerol lipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); long-term synaptic depression (ortholog); lysobisphosphatidic acid metabolic process (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955430 1809969 1861441 - 102010506 AGCD01029135;AGCD01029136;AGCD01029137;AGCD01029138;GBDF01013377;XM_005387302 XP_005387359 MODEL 8706589 pseudo LOC102013096 probable E3 ubiquitin-protein ligase HECTD2 NW_004955493 1068126 1073096 + 102013096 AGCD01060877 MODEL 8923267 protein-coding LOC102005563 chromosome unknown open reading frame, human C5orf52 NW_004955455 4906038 4911269 + 102005563 AGCD01045705;GBDF01215498;XM_013520307 XP_013375761 MODEL 8737315 pseudo LOC102013471 poly(rC)-binding protein 2 pseudogene NW_004955405 1213036 1219942 - 102013471 AGCD01004598 MODEL 10095887 protein-coding LOC102008821 uncharacterized LOC102008821 NW_004955455 6620069 6624760 + 102008821 AGCD01045802;XM_013520311 XP_013375765 MODEL 8772561 pseudo LOC102008442 26S proteasome non-ATPase regulatory subunit 14 pseudogene NW_004955428 13615029 13616146 - 102008442 AGCD01027959 MODEL 9003830 protein-coding LOC102009579 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase NW_004955456 8783121 8961174 + 102009579 AGCD01046502;AGCD01046503;AGCD01046504;GBDF01082105;XM_005396723;XM_013520568;XM_013520569;XM_013520570;XM_013520571 XP_005396780;XP_013376022;XP_013376023;XP_013376024;XP_013376025 MODEL 9014257 ncrna LOC102003737 uncharacterized LOC102003737 NW_004955459 3075325 3077325 - 102003737 AGCD01048007;GBCQ01075158;XR_263012 MODEL 8705993 ncrna LOC102014188 uncharacterized LOC102014188 NW_004955448 18347215 18360566 + 102014188 AGCD01041746;GBCQ01112525;XR_262479 MODEL 9061830 protein-coding Gprasp2 G protein-coupled receptor associated sorting protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); intellectual disability (ortholog); X-linked deafness 7 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955548 172442 202686 + 102020613 AGCD01072322;AGCD01072323;GBDF01252846;XM_013508532;XM_013508533;XM_013508534;XM_013508535;XM_013508536;XR_001232250 XP_013363986;XP_013363987;XP_013363988;XP_013363989;XP_013363990 MODEL 8920577 protein-coding Il1rl1 interleukin 1 receptor like 1 ENCODES a protein that exhibits interleukin-33 binding (ortholog); interleukin-33 receptor activity (ortholog); INVOLVED IN cellular response to endothelin (ortholog); cellular response to mechanical stimulus (ortholog); inflammatory response (ortholog); ASSOCIATED WITH acute asthma (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular matrix (ortholog) NW_004955470 7779828 7849157 + 102020238 AGCD01052809;AGCD01052810;AGCD01052811;AGCD01052812;GBCE01046532;XM_005400767;XM_005400768;XM_013522847;XM_013522848;XM_013522849;XM_013522850;XM_013522851;XM_013522852;XM_013522853;XM_013522854 XP_005400824;XP_005400825;XP_013378301;XP_013378302;XP_013378303;XP_013378304;XP_013378305;XP_013378306;XP_013378307;XP_013378308 MODEL 8791076 protein-coding Ankh ANKH inorganic pyrophosphate transport regulator ENCODES a protein that exhibits ATP transmembrane transporter activity (ortholog); phosphate transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN ATP export (ortholog); regulation of bone mineralization (ortholog); ASSOCIATED WITH ankylosis (ortholog); arthritis (ortholog); autosomal dominant craniometaphyseal dysplasia (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955426 3992671 4130754 - 102009521 AGCD01026087;AGCD01026088;GBCE01004397;GBCE01004398;XM_005386126 XP_005386183 MODEL 8787224 protein-coding Dhps deoxyhypusine synthase ENCODES a protein that exhibits deoxyhypusine synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); peptidyl-hypusine biosynthetic process (ortholog); positive regulation of T cell proliferation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorder with Seizures and Speech and Walking Impairment (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN cytosol (ortholog) NW_004955415 31778632 31782782 - 102017865 AGCD01016697;GBDK01188232;XM_005381015 XP_005381072 MODEL 8778942 protein-coding Itpk1 inositol-tetrakisphosphate 1-kinase ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 6-kinase activity (ortholog); inositol-1,3,4-trisphosphate 5-kinase activity (ortholog); inositol-1,3,4-trisphosphate 6-kinase activity (ortholog); INVOLVED IN necroptotic process (ortholog); neural tube development (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH Neoplasm Invasiveness (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955438 15107992 15257730 - 102030346 AGCD01035359;GBDF01124582;XM_005390340;XM_013517236;XM_013517237 XP_005390397;XP_013372690;XP_013372691 MODEL 9007008 pseudo LOC102008087 Y+L amino acid transporter 2 pseudogene NW_004955472 118385 120399 + 102008087 AGCD01053315 MODEL 8820757 protein-coding Brms1l BRMS1 like transcriptional repressor FOUND IN nucleoplasm (ortholog) NW_004955409 25286312 25319557 - 102027153 AGCD01010110;AGCD01010111;AGCD01010112;GBDI01025327;XM_005376913 XP_005376970 MODEL 39133709 misc_rna 7SK 7SK RNA 9049036 protein-coding Fbxo32 F-box protein 32 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); muscle atrophy (ortholog); negative regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); muscular atrophy (ortholog); primary pulmonary hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955540 2309315 2334735 - 102003485 AGCD01071319;GBBH01142971;GBDK01430506;XM_005410930 XP_005410987 MODEL 9019601 protein-coding Hs6st3 heparan sulfate 6-O-sulfotransferase 3 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955404 13461906 14129089 - 102022454 AGCD01003484;AGCD01003485;AGCD01003486;AGCD01003487;AGCD01003488;AGCD01003489;AGCD01003490;AGCD01003491;AGCD01003492;AGCD01003493;AGCD01003494;AGCD01003495;AGCD01003496;AGCD01003497;AGCD01003498;AGCD01003499;AGCD01003500;AGCD01003501;GBDF01021825;GBDF01188326;XM_005374096 XP_005374153 MODEL 9053543 ncrna LOC102015683 uncharacterized LOC102015683 NW_004955403 3112831 3119376 - 102015683 AGCD01001752;GBDF01279437;XR_259144 MODEL 8822595 protein-coding LOC102011088 olfactory receptor 1361-like NW_004955408 1647226 1658966 + 102011088 AGCD01007970;XM_005376563 XP_005376620 MODEL 8960607 ncrna LOC102011937 uncharacterized LOC102011937 NW_004955403 40009315 40019121 + 102011937 AGCD01002656;AGCD01002657;GBDF01192639;XR_259230 MODEL 8966838 ncrna LOC102019181 uncharacterized LOC102019181 NW_004955422 2137150 2166560 + 102019181 AGCD01022480;AGCD01022481;GBDK01327229;XR_001234010;XR_001234011;XR_001234012 MODEL 8973431 protein-coding LOC102020546 uncharacterized LOC102020546 NW_004955465 5665005 5778527 + 102020546 AGCD01050431;AGCD01050432;AGCD01050433;GBDF01117484;XM_005398983 XP_005399040 MODEL 8909135 ncrna LOC102020211 uncharacterized LOC102020211 NW_004955408 24110038 24115850 + 102020211 AGCD01008594;GBDF01118248;XR_001232406 MODEL 8714119 pseudo LOC102012709 40S ribosomal protein S29 pseudogene NW_004955587 108587 108779 - 102012709 AGCD01076058 MODEL 8948042 protein-coding Csf3 colony stimulating factor 3 ENCODES a protein that exhibits cytokine activity (ortholog); enzyme binding (ortholog); granulocyte colony-stimulating factor receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); granulocyte colony-stimulating factor signaling pathway (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN extracellular space (ortholog) NW_004955451 14688181 14690126 + 102007963 AGCD01043566;GBDJ01195230;XM_005394341 XP_005394398 MODEL 8832499 protein-coding Ier3 immediate early response 3 INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); COVID-19 (ortholog); hypertension (ortholog); FOUND IN nucleus (ortholog) NW_004955583 730353 731301 - 102019341 AGCD01075858;GBDF01049433;XM_005414319 XP_005414376 MODEL 8927963 ncrna LOC102010314 uncharacterized LOC102010314 NW_004955555 108802 119271 + 102010314 AGCD01073024;GBBH01226678;XR_264947;XR_264948 MODEL 8780958 protein-coding Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory ENCODES a protein that exhibits dolichyl-phosphate beta-D-mannosyltransferase activity (ortholog); enzyme activator activity (ortholog); enzyme regulator activity (ortholog); INVOLVED IN dolichol phosphate mannose biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Iu (ortholog); FOUND IN dolichol-phosphate-mannose synthase complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955419 740815 743036 + 102020010 AGCD01019608;GBDK01237584;XM_005382389;XM_013513156;XR_260596 XP_005382446;XP_013368610 MODEL 8758264 protein-coding Chtop chromatin target of PRMT1 ENCODES a protein that exhibits methyl-CpG binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); in utero embryonic development (ortholog); mRNA export from nucleus (ortholog); FOUND IN nuclear speck (ortholog); transcription export complex (ortholog) NW_004955545 282342 292428 + 102014495 AGCD01071781;AGCD01071782;GBDJ01010515;XM_005411419;XM_005411421;XM_005411422;XM_005411423;XM_005411424;XM_005411425;XM_013508321;XM_013508322;XM_013508323 XP_005411476;XP_005411478;XP_005411479;XP_005411480;XP_005411481;XP_005411482;XP_013363775;XP_013363776;XP_013363777 MODEL 9049093 protein-coding Emp2 epithelial membrane protein 2 ENCODES a protein that exhibits integrin binding (ortholog); kinase binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin-mediated cell contraction (ortholog); apoptotic process (ortholog); ASSOCIATED WITH nephrotic syndrome type 10 (ortholog); placental insufficiency (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); caveola (ortholog) NW_004955442 7826967 7862035 + 102009227 AGCD01037628;GBCB01040537;XM_005391190 XP_005391247 MODEL 8754735 protein-coding Egfl7 EGF like domain multiple 7 ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN blood vessel development (ortholog); negative regulation of cell migration (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955513 4145059 4154918 - 102004191 AGCD01066922;AGCD01066923;GBDI01006336;XM_005408482;XM_005408483;XM_013506698;XM_013506699;XM_013506700 XP_005408539;XP_005408540;XP_013362152;XP_013362153;XP_013362154 MODEL 10281399 protein-coding CUNH11orf97 chromosome unknown C11orf97 homolog INVOLVED IN cilium assembly (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955605 411307 421934 - 106147638 AGCD01076946;GBBH01166937;XM_013510106 XP_013365560 MODEL 10103369 ncrna LOC106149922 uncharacterized LOC106149922 NW_004955406 12451365 12453416 - 106149922 AGCD01005919;GBDF01009943;XR_001236400 MODEL 8836384 protein-coding LOC102017598 metallothionein-I, hippocampal-like NW_004955433 14372766 14374000 + 102017598 AGCD01031721;GBDF01147217;XM_005388356 XP_005388413 MODEL 8822826 protein-coding LOC102021691 estradiol 17 beta-dehydrogenase 5-like NW_004955429 578697 593487 + 102021691 AGCD01028368;AGCD01028369;GBDF01052126;XM_005386850;XM_005386852 XP_005386907;XP_005386909 MODEL 9013918 protein-coding Itpka inositol-trisphosphate 3-kinase A ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to calcium ion (ortholog); dendritic spine maintenance (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955416 8300059 8310225 + 102005803 AGCD01017040;AGCD01017041;GBBH01166128;GBDJ01198675;XM_013512602 XP_013368056 MODEL 8814108 protein-coding Ddias DNA damage induced apoptosis suppressor INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to gamma radiation (ortholog); cellular response to hydroperoxide (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955414 9607338 9636941 - 102030296 AGCD01015029;AGCD01015030;AGCD01015031;GBDF01015330;XM_013512024 XP_013367478 MODEL 9010383 protein-coding LOC102011487 olfactory receptor 2B6-like NW_004955576 1333991 1334947 + 102011487 AGCD01075372;XM_005413953 XP_005414010 MODEL 8750991 pseudo LOC102007677 40S ribosomal protein S3a pseudogene NW_004955426 13259846 13261749 + 102007677 AGCD01026360 MODEL 9000713 protein-coding Cylc2 cylicin 2 INVOLVED IN acrosome assembly (ortholog); maintenance of cell number (ortholog); manchette assembly (ortholog); FOUND IN cytoskeletal calyx (ortholog); perinuclear theca (ortholog); sperm glycocalyx (ortholog) NW_004955419 23183700 23218555 - 102006350 AGCD01020315;AGCD01020316;AGCD01020317;GBDF01045355;XM_005382791;XM_013513110;XM_013513111;XM_013513112;XM_013513113;XM_013513114;XM_013513115;XM_013513116;XM_013513117;XM_013513118 XP_005382848;XP_013368564;XP_013368565;XP_013368566;XP_013368567;XP_013368568;XP_013368569;XP_013368570;XP_013368571;XP_013368572 MODEL 8892681 protein-coding Abhd8 abhydrolase domain containing 8 INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog) NW_004955524 924128 932046 + 102027448 AGCD01068727;AGCD01068728;AGCD01068729;GBBH01227340;GBDK01393506;XM_013507241 XP_013362695 MODEL 9023469 pseudo LOC102008823 UDP-glucuronosyltransferase 1-8 pseudogene NW_004955407 23170169 23171410 + 102008823 AGCD01007415 MODEL 8979274 protein-coding LOC102013097 zinc finger protein 782 NW_004955422 23787215 23873788 - 102013097 AGCD01023206;AGCD01023207;AGCD01023208;AGCD01023209;AGCD01023210;GBBH01218955;XM_005384706;XM_013513992;XM_013513993;XM_013513994;XM_013513995;XM_013513996;XM_013513997;XM_013513998;XM_013513999;XM_013514000;XM_013514001;XM_013514002 XP_005384763;XP_013369446;XP_013369447;XP_013369448;XP_013369449;XP_013369450;XP_013369451;XP_013369452;XP_013369453;XP_013369454;XP_013369455;XP_013369456 MODEL 8720989 pseudo LOC102008445 proteasome assembly chaperone 1-like NW_004955431 13381828 13382937 - 102008445 AGCD01030304 MODEL 8882147 pseudo LOC102019186 zinc finger protein 280D pseudogene NW_004955501 4636880 4667130 + 102019186 AGCD01064133;AGCD01064134;AGCD01064135;AGCD01064136 MODEL 8789208 pseudo LOC102009581 rRNA-processing protein UTP23 homolog pseudogene NW_004955458 15500020 15501069 + 102009581 AGCD01047897 MODEL 39132013 rrna 5S_rRNA 5S ribosomal RNA 8995798 ncrna LOC102013834 uncharacterized LOC102013834 NW_004955421 71026 77156 - 102013834 AGCD01021542;GBDF01044878;XR_260781 MODEL 39134295 misc_rna 7SK 7SK RNA 8790078 ncrna LOC102020215 uncharacterized LOC102020215 NW_004955409 2720168 2720429 + 102020215 AGCD01009216;GBBH01139966;XR_259746 MODEL 9044486 protein-coding Cplane1 ciliogenesis and planar polarity effector complex subunit 1 INVOLVED IN cardiac septum development (ortholog); cerebellum development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); Jaundice (ortholog); FOUND IN ciliary transition zone (ortholog) NW_004955426 21867876 21991889 - 102014378 AGCD01026597;AGCD01026598;AGCD01026599;AGCD01026600;AGCD01026601;GBDF01004778;GBDF01004782;XM_013514957;XM_013514958;XM_013514959 XP_013370411;XP_013370412;XP_013370413 MODEL 8851512 protein-coding Ier3ip1 immediate early response 3 interacting protein 1 INVOLVED IN brain development (ortholog); cell maturation (ortholog); chromatin organization (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 32532692 32550638 - 102007070 AGCD01000824;AGCD01000825;GBDK01229939;XM_005372888 XP_005372945 MODEL 39133712 misc_rna 7SK 7SK RNA 8832126 pseudo LOC102005565 histone-binding protein RBBP4-B-like NW_004955407 19026615 19027887 - 102005565 AGCD01007294 MODEL 8888636 protein-coding Kcnh2 potassium voltage-gated channel subfamily H member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to xenobiotic stimulus (ortholog); membrane depolarization during action potential (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Alstrom syndrome (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); inward rectifier potassium channel complex (ortholog) NW_004955491 5391444 5422241 - 102027312 AGCD01060482;GBDF01123064;GBDJ01376241;XM_005404800 XP_005404857 MODEL 8927955 protein-coding LOC102009205 olfactory receptor 5AN1-like NW_004955511 3886762 3887700 - 102009205 AGCD01066481;XM_005408267 XP_005408324 MODEL 8707420 ncrna LOC102020950 uncharacterized LOC102020950 NW_004955436 4306094 4347032 - 102020950 AGCD01033661;GBDF01043200;XR_001234965 MODEL 8833138 protein-coding LOC102013474 translation initiation factor IF-2-like NW_004955407 18942404 19075796 + 102013474 AGCD01007290;AGCD01007291;AGCD01007292;AGCD01007293;AGCD01007294;GBDF01304388;XM_013505824 XP_013361278 MODEL 8833325 protein-coding Hsbp1 heat shock factor binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axonal transport of mitochondrion (ortholog); endodermal cell differentiation (ortholog); muscle contraction (ortholog); FOUND IN nuclear speck (ortholog) NW_004955564 396985 400975 - 102023643 AGCD01074204;GBDF01008618;XM_005413237;XR_001232387 XP_005413294 MODEL 8830000 protein-coding Fbxo33 F-box protein 33 NW_004955409 21929863 21952812 + 102014649 AGCD01009996;AGCD01009997;AGCD01009998;GBDF01127060;XM_005376882 XP_005376939 MODEL 39134012 misc_rna 7SK 7SK RNA 8736575 ncrna LOC102020547 uncharacterized LOC102020547 NW_004955466 9565453 9567673 + 102020547 AGCD01051047;GBCC01009470;XR_263302 MODEL 9063822 protein-coding Itpkb inositol-trisphosphate 3-kinase B ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular response to calcium ion (ortholog); common myeloid progenitor cell proliferation (ortholog); ASSOCIATED WITH myeloproliferative neoplasm (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955489 726641 814180 - 102013422 AGCD01059812;AGCD01059813;GBCB01087148;XM_005404501 XP_005404558 MODEL 8840529 pseudo LOC102003747 aldo-keto reductase family 1 member B10-like NW_004955467 4392827 4400286 + 102003747 AGCD01051366 MODEL 39131811 rrna 5S_rRNA 5S ribosomal RNA 8792153 protein-coding Gprasp3 G protein-coupled receptor associated sorting protein family member 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of dendritic spine morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955548 230525 236043 + 102021803 AGCD01072324;AGCD01072325;GBDI01177598;XM_013508530 XP_013363984 MODEL 8827730 protein-coding Ankib1 ankyrin repeat and IBR domain containing 1 FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955432 9220318 9358728 + 102028325 AGCD01030898;AGCD01030899;AGCD01030900;AGCD01030901;AGCD01030902;AGCD01030903;AGCD01030904;GBDF01081537;XM_005388006;XM_005388008;XM_005388009;XM_013515948 XP_005388063;XP_005388065;XP_005388066;XP_013371402 MODEL 9060848 pseudo LOC102016457 alpha-enolase pseudogene NW_004955410 9065318 9066649 - 102016457 AGCD01010758 MODEL 8836104 ncrna LOC102008088 uncharacterized LOC102008088 NW_004955415 25886988 25916316 - 102008088 AGCD01016587;GBBH01171947;XR_260315 MODEL 9026414 protein-coding Csf3r colony stimulating factor 3 receptor ENCODES a protein that exhibits granulocyte colony-stimulating factor binding (ortholog); INVOLVED IN amelogenesis (ortholog); neutrophil chemotaxis (ortholog); regulation of myeloid cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bacterial pneumonia (ortholog); chronic myelomonocytic leukemia (ortholog) NW_004955452 14409484 14425818 - 102007185 AGCD01044466;GBDK01198532;XM_005395200;XM_013519565;XM_013519566;XM_013519567;XM_013519568;XM_013519569;XM_013519570;XM_013519571 XP_005395257;XP_013375019;XP_013375020;XP_013375021;XP_013375022;XP_013375023;XP_013375024;XP_013375025 MODEL 9018905 protein-coding Brox BRO1 domain and CAAX motif containing INVOLVED IN mitotic nuclear membrane reassembly (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955520 1797657 1819359 - 102017050 AGCD01068062;GBCQ01127688;XM_005409252;XM_005409253;XM_013507023;XM_013507025;XM_013507026 XP_005409309;XP_005409310;XP_013362477;XP_013362479;XP_013362480 MODEL 8893065 ncrna LOC102011940 uncharacterized LOC102011940 NW_004955403 54668718 54673281 + 102011940 AGCD01003101;GBDF01280593;XR_001234182;XR_001234183 MODEL 8948205 protein-coding LOC102015684 ubiquitin carboxyl-terminal hydrolase 28-like NW_004955659 2405 15601 + 102015684 AGCD01077875;GBCB01026188;GBDJ01061026;XM_013510176 XP_013365630 MODEL 9049882 protein-coding Erbin erbb2 interacting protein ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); negative regulation of monocyte chemotactic protein-1 production (ortholog); negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); prostate cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955446 3046268 3151796 - 102017075 AGCD01039998;AGCD01039999;AGCD01040000;AGCD01040001;AGCD01040002;GBBH01209360;GBDJ01086651;XM_013518424;XM_013518425;XM_013518427;XM_013518428;XM_013518429;XM_013518430;XM_013518431;XM_013518432 XP_013373878;XP_013373879;XP_013373881;XP_013373882;XP_013373883;XP_013373884;XP_013373885;XP_013373886 MODEL 8944146 protein-coding LOC102021695 olfactory receptor 4A15-like NW_004955511 61146 62063 - 102021695 AGCD01066313;XM_005408176 XP_005408233 MODEL 8725804 protein-coding LOC102024443 taste receptor type 2 member 140-like NW_004955413 8151739 8152674 - 102024443 AGCD01013852;XM_005379630 XP_005379687 MODEL 9046756 protein-coding Egfl8 EGF like domain multiple 8 INVOLVED IN in utero embryonic development (ortholog) NW_004955437 630099 633592 + 102013968 AGCD01034152;GBDI01325138;XM_005389429;XM_005389431;XM_005389432 XP_005389486;XP_005389488;XP_005389489 MODEL 8792014 protein-coding LOC102015319 thioredoxin NW_004955419 16868816 16880245 + 102015319 AGCD01020127;AGCD01020128;GBDI01015857;XM_005382739;XM_005382740 XP_005382796;XP_005382797 MODEL 8932772 pseudo LOC102012710 GTP:AMP phosphotransferase AK3, mitochondrial pseudogene NW_004955402 34583997 34587079 + 102012710 AGCD01000866 MODEL 8798603 pseudo LOC102013101 MICOS complex subunit MIC27 pseudogene NW_004955424 28108796 28113637 - 102013101 AGCD01025147 MODEL 8938336 protein-coding LOC102019190 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like NW_004955510 397595 407996 - 102019190 AGCD01066147;AGCD01066148;XM_013506307 XP_013361761 MODEL 8965931 pseudo LOC102009587 39S ribosomal protein L30, mitochondrial pseudogene NW_004955464 11215198 11215862 + 102009587 AGCD01050139 MODEL 8961889 protein-coding LOC102010318 seminal vesicle major clotting proteins-like NW_004955445 12149377 12156385 - 102010318 AGCD01039740;AGCD01039741;AGCD01039742;XM_005392442 XP_005392499 MODEL 8812013 protein-coding Fbxo34 F-box protein 34 NW_004955466 13981664 13984804 - 102011854 AGCD01051197;GBCQ01155104;XM_013522008 XP_013377462 MODEL 8987781 protein-coding Dhrs1 dehydrogenase/reductase 1 ENCODES a protein that exhibits carbonyl reductase (NADPH) activity (ortholog); oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955409 36002576 36040595 + 102018811 AGCD01010438;AGCD01010439;AGCD01010440;GBCE01000652;GBDK01020457;XM_013510399 XP_013365853 MODEL 39134297 misc_rna 7SK 7SK RNA 8712001 protein-coding Emp3 epithelial membrane protein 3 (MAM blood group) INVOLVED IN apoptotic process (ortholog); bleb assembly (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955559 2117200 2121366 - 102012480 AGCD01073691;GBDJ01005369;XM_005412959;XM_013509045 XP_005413016;XP_013364499 MODEL 8879661 pseudo LOC102017599 phosphatidylinositol-glycan biosynthesis class F protein pseudogene NW_004955525 636451 637094 - 102017599 AGCD01069002 MODEL 10383557 ncrna LOC106149923 uncharacterized LOC106149923 NW_004955457 10005195 10025117 + 106149923 AGCD01046947;XR_001236402;XR_001236403 MODEL 10227157 protein-coding CUNH11orf98 chromosome unknown C11orf98 homolog NW_004955599 546973 548685 + 106147623 AGCD01076658;GBDF01088651;XM_013510069 XP_013365523 MODEL 39133714 misc_rna 7SK 7SK RNA 9040946 ncrna LOC102007678 uncharacterized LOC102007678 NW_004955427 4628626 4654041 - 102007678 AGCD01026970;AGCD01026971;GBDF01253448;XR_261233 MODEL 8948582 pseudo LOC102005569 UDP-N-acetylhexosamine pyrophosphorylase pseudogene NW_004955458 8136442 8138154 - 102005569 AGCD01047600 MODEL 9004389 protein-coding Ddit3 DNA damage inducible transcript 3 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); apoptotic process (ortholog); artery development (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); Acute-Phase Reaction (ortholog); FOUND IN CHOP-ATF3 complex (ortholog); CHOP-ATF4 complex (ortholog); CHOP-C/EBP complex (ortholog) NW_004955458 5232979 5238513 - 102003212 AGCD01047470;GBDF01053797;XM_005397386 XP_005397443 MODEL 8785773 pseudo LOC102014587 small ubiquitin-related modifier 2-like NW_004955503 7468252 7476166 - 102014587 AGCD01064794 MODEL 8776985 pseudo LOC102009207 THO complex subunit 4-like NW_004955512 905817 925046 + 102009207 AGCD01066626 MODEL 9027735 pseudo LOC102008826 creatine kinase U-type, mitochondrial-like NW_004955409 22945071 22950655 + 102008826 AGCD01010048 MODEL 8916529 protein-coding Il1rl2 interleukin 1 receptor like 2 INVOLVED IN cytokine-mediated signaling pathway (ortholog); inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); ASSOCIATED WITH aortic dissection (ortholog); Myocardial Reperfusion Injury (ortholog) NW_004955470 7703369 7742058 + 102030184 AGCD01052803;AGCD01052804;GBDI01346727;XM_013522820;XM_013522821;XM_013522822 XP_013378274;XP_013378275;XP_013378276 MODEL 39134013 misc_rna 7SK 7SK RNA 8820351 ncrna LOC102008451 uncharacterized LOC102008451 NW_004955435 5691131 5736182 + 102008451 AGCD01032894;GBCQ01091899;XR_001234882 MODEL 8715118 protein-coding Abi1 abl interactor 1 ENCODES a protein that exhibits protein tyrosine kinase activator activity (ortholog); SH3 domain binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); lamellipodium morphogenesis (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell leading edge (ortholog); filopodium tip (ortholog); glutamatergic synapse (ortholog) NW_004955429 2682341 2783752 + 102028665 AGCD01028435;AGCD01028436;AGCD01028437;AGCD01028438;GBDF01119577;XM_005386876;XM_005386878;XM_005386879;XM_005386881;XM_005386882;XM_005386884;XM_005386885;XM_005386886;XM_005386888;XM_005386890;XM_005386891;XM_013515431;XM_013515432 XP_005386933;XP_005386935;XP_005386936;XP_005386938;XP_005386939;XP_005386941;XP_005386942;XP_005386943;XP_005386945;XP_005386947;XP_005386948;XP_013370885;XP_013370886 MODEL 39132014 rrna 5S_rRNA 5S ribosomal RNA 9031206 ncrna LOC102011091 uncharacterized LOC102011091 NW_004955409 10810505 10829604 + 102011091 AGCD01009485;GBDI01024783;XR_259768 MODEL 8870476 protein-coding LOC102016079 membrane-spanning 4-domains subfamily A member 4A-like NW_004955511 4468774 4487669 - 102016079 AGCD01066504;AGCD01066505;GBDK01165264;XM_005408077 XP_005408134 MODEL 8936086 protein-coding Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN dolichol phosphate mannose biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH Congenital Disorder of Glycosylation Type 1O (ortholog); muscular dystrophy-dystroglycanopathy type B15 (ortholog); myopathy (ortholog); FOUND IN dolichol-phosphate-mannose synthase complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955545 1621515 1622103 - 102027345 AGCD01071863;GBDK01001487;XM_013508196;XM_013508197 XP_013363650;XP_013363651 MODEL 8772275 ncrna LOC102012713 uncharacterized LOC102012713 NW_004955599 522218 526724 - 102012713 AGCD01076655;GBDI01339273;XR_001232551;XR_001232552;XR_265154 MODEL 8705104 ncrna LOC102011493 uncharacterized LOC102011493 NW_004955403 2475409 2479214 + 102011493 AGCD01001736;GBDF01280925;XR_001234362 MODEL 8887320 protein-coding Gprc5a G protein-coupled receptor class C group 5 member A INVOLVED IN negative regulation of epidermal growth factor-activated receptor activity (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN plasma membrane (ortholog); vesicle (ortholog) NW_004955413 9765564 9784847 + 102020550 AGCD01013910;AGCD01013911;AGCD01013912;AGCD01013913;GBDK01014848;XM_005378975 XP_005379032 MODEL 8864234 protein-coding LOC102020216 olfactory receptor 6C76 NW_004955458 2704483 2705460 - 102020216 AGCD01047240;XM_013520799 XP_013376253 MODEL 8863145 protein-coding LOC102008089 cystatin-C-like NW_004955415 30698518 30701160 + 102008089 AGCD01016666;GBDJ01009478;XM_005380979 XP_005381036 MODEL 8810878 ncrna LOC102020959 uncharacterized LOC102020959 NW_004955442 10985993 11006650 + 102020959 AGCD01037714;GBDF01125761;XR_262135 MODEL 8712207 pseudo LOC102020548 putative monooxygenase p33MONOX pseudogene NW_004955466 8052265 8053164 + 102020548 AGCD01050977 MODEL 8775433 pseudo LOC102024447 acidic leucine-rich nuclear phosphoprotein 32 family member E pseudogene NW_004955414 22245541 22246767 + 102024447 AGCD01015449 MODEL 8709348 protein-coding LOC102014190 E3 ubiquitin-protein ligase TRIM39 NW_004955583 454579 466005 + 102014190 AGCD01075825;GBBH01186352;GBCE01008619;XM_005414304;XM_013509782;XM_013509783 XP_005414361;XP_013365236;XP_013365237 MODEL 8936361 protein-coding Cyld CYLD lysine 63 deubiquitinase ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); homeostasis of number of cells (ortholog); innate immune response (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Brooke-Spiegler syndrome (ortholog); Frontotemporal Dementia and/or Amyotrophic Lateral Sclerosis-8 (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955433 8788867 8845925 + 102017373 AGCD01031603;GBDF01085055;XM_005388274;XM_005388275;XM_005388276;XM_005388277;XM_005388278;XM_005388279 XP_005388331;XP_005388332;XP_005388333;XP_005388334;XP_005388335;XP_005388336 MODEL 8761853 protein-coding Hscb HscB mitochondrial iron-sulfur cluster cochaperone ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); iron-sulfur cluster assembly (ortholog); primitive erythrocyte differentiation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH sideroblastic anemia 5 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955455 3005617 3013393 + 102021942 AGCD01045607;GBDF01160701;XM_005396163 XP_005396220 MODEL 8881083 pseudo LOC102003752 26S protease regulatory subunit 4 pseudogene NW_004955469 9387077 9396448 - 102003752 AGCD01052500;AGCD01052501 MODEL 8734916 protein-coding Itpkc inositol-trisphosphate 3-kinase C ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); coronary aneurysm (ortholog); Kawasaki disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955578 597105 614081 - 102007483 AGCD01075489;GBDF01305939;XM_005414026 XP_005414083 MODEL 9058412 protein-coding Chuk component of inhibitor of nuclear factor kappa B kinase complex ENCODES a protein that exhibits identical protein binding (ortholog); IkappaB kinase activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); cellular response to virus (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; interleukin-1 signaling pathway; ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); bacterial pneumonia (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955507 6066026 6102066 - 102005401 AGCD01065695;AGCD01065696;GBBH01131798;GBCC01033483;XM_005407721 XP_005407778 MODEL 8907916 protein-coding Erc1 ELKS/RAB6-interacting/CAST family member 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); small GTPase binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Macrocephaly, Dysmorphic Facies, and Psychomotor Retardation (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955454 3584910 4036276 + 102023327 AGCD01045094;AGCD01045095;AGCD01045096;AGCD01045097;AGCD01045098;AGCD01045099;AGCD01045100;AGCD01045101;AGCD01045102;AGCD01045103;AGCD01045104;AGCD01045105;AGCD01045106;AGCD01045107;AGCD01045108;GBBH01147455;XM_005395944;XM_005395945;XM_005395946;XM_005395947;XM_005395948;XM_005395949;XM_013520185;XM_013520186;XM_013520187;XM_013520189;XM_013520190;XM_013520191;XM_013520192 XP_005396001;XP_005396002;XP_005396003;XP_005396004;XP_005396005;XP_005396006;XP_013375639;XP_013375640;XP_013375641;XP_013375643;XP_013375644;XP_013375645;XP_013375646 MODEL 8746347 protein-coding Emsy EMSY transcriptional repressor, BRCA2 interacting ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955414 15395851 15482490 - 102015398 AGCD01015184;AGCD01015185;AGCD01015186;GBDK01013488;XM_005379854;XM_005379859;XM_005379860;XM_005379861;XM_005379865;XM_013511858;XM_013511859;XM_013511860;XM_013511861;XM_013511862;XM_013511863;XM_013511864;XM_013511865;XM_013511866;XM_013511867;XM_013511868;XM_013511869;XM_013511870;XM_013511871;XR_001233129;XR_001233130 XP_005379911;XP_005379916;XP_005379917;XP_005379918;XP_005379922;XP_013367312;XP_013367313;XP_013367314;XP_013367315;XP_013367316;XP_013367317;XP_013367318;XP_013367319;XP_013367320;XP_013367321;XP_013367322;XP_013367323;XP_013367324;XP_013367325 MODEL 8994315 protein-coding Egflam EGF like, fibronectin type III and laminin G domains ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); synapse assembly (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); extracellular matrix (ortholog) NW_004955426 22856515 23030517 + 102018622 AGCD01026627;AGCD01026628;AGCD01026629;AGCD01026630;AGCD01026631;AGCD01026632;GBDF01182451;XM_005386224 XP_005386281 MODEL 8920570 ncrna LOC102019194 uncharacterized LOC102019194 NW_004955513 2803458 2806011 + 102019194 AGCD01066890;GBDK01230384;XR_001231760;XR_264459 MODEL 8841146 protein-coding Ier5 immediate early response 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); positive regulation of cellular response to heat (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955406 20140510 20143147 + 102023432 AGCD01006098;AGCD01006099;GBBH01117662;GBDF01075618;XM_013521367 XP_013376821 MODEL 8901444 ncrna LOC102010321 uncharacterized LOC102010321 NW_004955402 42833311 42840895 + 102010321 AGCD01001049;GBCB01051675;XR_259085 MODEL 8837278 protein-coding Cplane2 ciliogenesis and planar polarity effector complex subunit 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); cranial skeletal system development (ortholog); ASSOCIATED WITH VACTERL association (ortholog); visceral heterotaxy (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955527 2060063 2064152 + 102029437 AGCD01069421;GBDF01192941;XM_005409837;XM_013507388 XP_005409894;XP_013362842 MODEL 8878455 protein-coding Ankk1 ankyrin repeat and kinase domain containing 1 INVOLVED IN cellular response to retinoic acid (ortholog); regulation of cell cycle process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol-induced mental disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955412 15036071 15046118 + 102008708 AGCD01012865;GBBH01072256;XM_005378145;XM_013511262;XM_013511263 XP_005378202;XP_013366716;XP_013366717 MODEL 8754161 ncrna LOC102013482 uncharacterized LOC102013482 NW_004955410 30652472 30654572 + 102013482 AGCD01011311;GBDF01251645;XR_001232753 MODEL 9033941 ncrna LOC102015687 uncharacterized LOC102015687 NW_004955405 39366026 39376002 - 102015687 AGCD01005499;GBDI01373801;XR_259446 MODEL 8862798 protein-coding Kcnh3 potassium voltage-gated channel subfamily H member 3 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); FOUND IN plasma membrane (ortholog) NW_004955547 163130 180792 + 102030127 AGCD01072136;GBBH01187924;GBBH01187926;XM_005411830 XP_005411887 MODEL 39133715 misc_rna 7SK 7SK RNA 8955450 pseudo LOC102021699 protein SET-like NW_004955523 1341486 1342336 - 102021699 AGCD01068514 MODEL 8741623 protein-coding LOC102015321 zinc finger protein 14-like NW_004955487 57670 76813 - 102015321 AGCD01059204;AGCD01059205;AGCD01059206;GBDF01011198;XM_013504398;XM_013504399;XM_013504400;XM_013504401;XM_013504402;XM_013504403 XP_013359852;XP_013359853;XP_013359854;XP_013359855;XP_013359856;XP_013359857 MODEL 8724042 pseudo LOC102014591 coiled-coil domain-containing protein 152 pseudogene NW_004955428 11405395 11408989 - 102014591 AGCD01027898 MODEL 8961125 protein-coding Brpf1 bromodomain and PHD finger containing 1 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); common myeloid progenitor cell proliferation (ortholog); neural tube formation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog) NW_004955561 1260237 1275953 + 102006294 AGCD01073845;GBDF01089085;XM_005413023;XM_005413024;XM_005413025;XM_005413026;XM_005413027;XM_005413028;XM_013509081 XP_005413080;XP_005413081;XP_005413082;XP_005413083;XP_005413084;XP_005413085;XP_013364535 MODEL 39131812 rrna 5S_rRNA 5S ribosomal RNA 8901494 protein-coding LOC102013837 olfactory receptor 4C46-like NW_004955422 183190 184119 + 102013837 AGCD01022401;XM_005383940 XP_005383997 MODEL 8897222 pseudo LOC102013103 nuclear receptor-binding factor 2 pseudogene NW_004955425 22838039 22839048 + 102013103 AGCD01025835 MODEL 39134301 misc_rna 7SK 7SK RNA 9027875 protein-coding Abi2 abl interactor 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell migration (ortholog); dendrite development (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); cytosol (ortholog) NW_004955457 11451851 11562692 - 102023229 AGCD01046970;AGCD01046971;AGCD01046972;AGCD01046973;GBCB01057114;GBCQ01070270;XM_005397017;XM_005397018;XM_005397019;XM_005397020;XM_005397021;XM_005397022;XM_005397023;XM_005397024;XM_005397025;XM_005397028;XM_005397029;XM_013520694 XP_005397074;XP_005397075;XP_005397076;XP_005397077;XP_005397078;XP_005397079;XP_005397080;XP_005397081;XP_005397082;XP_005397085;XP_005397086;XP_013376148 MODEL 8818962 protein-coding Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN cartilage development (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); chondroitin sulfate proteoglycan metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); SKELETAL DYSPLASIA, MILD, WITH JOINT LAXITY AND ADVANCED BONE AGE (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955403 43178520 43347121 - 102021724 AGCD01002767;AGCD01002768;GBBH01036975;GBDJ01140032;XM_013513615 XP_013369069 MODEL 8968943 protein-coding LOC102017606 olfactory receptor 11G2-like NW_004955550 856201 857148 + 102017606 AGCD01072527;XM_005412038 XP_005412095 MODEL 8986054 pseudo LOC102008093 calcium-binding protein 39 pseudogene NW_004955476 5340462 5341052 + 102008093 AGCD01055302 MODEL 8913280 pseudo LOC102005572 tRNA pseudouridine(38/39) synthase-like NW_004955409 17846564 17848790 + 102005572 AGCD01009800 MODEL 8731233 protein-coding Dpp10 dipeptidyl peptidase like 10 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of protein localization to plasma membrane (ortholog); protein localization to plasma membrane (ortholog); regulation of potassium ion transmembrane transport (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); Bronchial Hyperreactivity (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955459 13456765 14767495 - 102028831 AGCD01048281;AGCD01048282;AGCD01048283;AGCD01048284;AGCD01048285;AGCD01048286;AGCD01048287;AGCD01048288;AGCD01048289;AGCD01048290;AGCD01048291;AGCD01048292;AGCD01048293;AGCD01048294;AGCD01048295;AGCD01048296;AGCD01048297;AGCD01048298;AGCD01048299;AGCD01048300;AGCD01048301;AGCD01048302;GBDI01318152;XM_005397695;XM_005397696;XM_005397697 XP_005397752;XP_005397753;XP_005397754 MODEL 8982933 protein-coding LOC102007680 olfactory receptor 13A1-like NW_004955507 6487198 6488139 - 102007680 AGCD01065718;XM_005407725 XP_005407782 MODEL 8781246 ncrna LOC102009208 uncharacterized LOC102009208 NW_004955514 376958 384322 + 102009208 AGCD01067008;AGCD01067009;GBDF01062503;XR_264490 MODEL 9056006 protein-coding Ddit4 DNA damage inducible transcript 4 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); leukemia (ortholog); mouth disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955437 19322407 19324562 - 102029555 AGCD01034844;GBDJ01073108;XM_005390015 XP_005390072 MODEL 39134016 misc_rna 7SK 7SK RNA 8971777 pseudo LOC102014192 calmodulin-alpha-like NW_004955588 210107 210570 + 102014192 AGCD01076095 MODEL 39132015 rrna 5S_rRNA 5S ribosomal RNA 8927609 pseudo LOC102016458 methylosome subunit pICln pseudogene NW_004955411 13133891 13135932 - 102016458 AGCD01011873 MODEL 8938138 protein-coding LOC102009589 olfactory receptor 8B12-like NW_004955412 25555457 25557190 - 102009589 AGCD01013160;XM_005378425 XP_005378482 MODEL 8763134 protein-coding Il1rn interleukin 1 receptor antagonist ENCODES a protein that exhibits interleukin-1 receptor antagonist activity (ortholog); interleukin-1 receptor binding (ortholog); interleukin-1 type I receptor antagonist activity (ortholog); INVOLVED IN acute-phase response (ortholog); carboxylic acid metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Abscess (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955470 1145022 1159413 - 102020903 AGCD01052627;GBDJ01263056;XM_005400584;XM_005400585;XM_005400586;XM_013522846 XP_005400641;XP_005400642;XP_005400643;XP_013378300 MODEL 8963721 protein-coding LOC102024449 olfactory receptor 52R1 NW_004955414 20381741 20382694 - 102024449 AGCD01015371;XM_005380472 XP_005380529 MODEL 8963477 protein-coding LOC102016081 olfactory receptor 8H1-like NW_004955511 1201311 1202258 + 102016081 AGCD01066360;XM_013506367 XP_013361821 MODEL 8851767 ncrna LOC102013839 uncharacterized LOC102013839 NW_004955422 18995156 19011808 - 102013839 AGCD01022970;GBDJ01159275;XR_260897 MODEL 9046725 pseudo LOC102011943 allograft inflammatory factor 1 pseudogene NW_004955404 28664142 28664895 + 102011943 AGCD01003957;XM_005374142 MODEL 8815275 pseudo LOC102019195 60S ribosomal protein L23a pseudogene NW_004955515 3451273 3452933 - 102019195 AGCD01067286 MODEL 10186633 ncrna LOC106149924 uncharacterized LOC106149924 NW_004955402 10356702 10388333 + 106149924 AGCD01000264;AGCD01000265;AGCD01000266;AGCD01000267;AGCD01000268;GBBH01124966;XR_001236409 MODEL 8790082 ncrna LOC102020220 uncharacterized LOC102020220 NW_004955409 35001455 35033359 + 102020220 AGCD01010413;GBDF01248623;XR_001232614;XR_259803 MODEL 8922714 protein-coding Ankle1 ankyrin repeat and LEM domain containing 1 ENCODES a protein that exhibits cobalt ion binding (ortholog); DNA endonuclease activity (ortholog); endonuclease activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); midbody (ortholog) NW_004955524 933200 936933 - 102027783 AGCD01068729;GBBH01173695;GBBH01210562;XM_005409673 XP_005409730 MODEL 8795990 protein-coding Egfr epidermal growth factor receptor ENCODES a protein that exhibits actin filament binding (ortholog); calmodulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cell morphogenesis (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; cetuximab pharmacodynamics pathway; E-cadherin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) NW_004955456 321222 456431 - 102003837 AGCD01046203;AGCD01046204;GBDJ01088996;XM_005396877 XP_005396934 MODEL 8989929 ncrna LOC102008827 uncharacterized LOC102008827 NW_004955410 29223762 29228888 - 102008827 AGCD01011276;GBDK01225118;XR_259882 MODEL 9057826 protein-coding Erc2 ELKS/RAB6-interacting/CAST family member 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of presynaptic cytosolic calcium ion concentration (ortholog); synapse organization (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); Golgi-associated vesicle (ortholog) NW_004955430 5345191 6308909 - 102008018 AGCD01029260;AGCD01029261;AGCD01029262;AGCD01029263;AGCD01029264;AGCD01029265;AGCD01029266;AGCD01029267;AGCD01029268;AGCD01029269;AGCD01029270;AGCD01029271;AGCD01029272;AGCD01029273;AGCD01029274;AGCD01029275;AGCD01029276;AGCD01029277;AGCD01029278;AGCD01029279;AGCD01029280;AGCD01029281;AGCD01029282;AGCD01029283;AGCD01029284;AGCD01029285;GBDI01215309;XM_005387385;XM_005387388;XM_013515684;XM_013515685;XM_013515686;XM_013515687;XM_013515688;XM_013515689;XM_013515690;XR_001234567 XP_005387442;XP_005387445;XP_013371138;XP_013371139;XP_013371140;XP_013371141;XP_013371142;XP_013371143;XP_013371144 MODEL 8760748 protein-coding LOC102020553 T-cell surface glycoprotein YE1/48-like NW_004955413 7208798 7216466 + 102020553 AGCD01013804;GBDF01197316;XM_005379618 XP_005379675 MODEL 8869001 pseudo LOC102020962 cyclin-G1 pseudogene NW_004955443 19577848 19578787 + 102020962 AGCD01038630 MODEL 8843012 ncrna LOC102008453 uncharacterized LOC102008453 NW_004955436 8430136 8452234 + 102008453 AGCD01033741;AGCD01033742;GBDJ01154251;XR_261770 MODEL 39131334 protein-coding CYREN cell cycle regulator of NHEJ 8836426 protein-coding LOC102021700 ubiquitin-conjugating enzyme E2 D4-like NW_004955525 2619948 2620976 - 102021700 AGCD01069098;GBDF01225732;XM_005409736 XP_005409793 MODEL 8898913 protein-coding Fbxo36 F-box protein 36 NW_004955453 5051138 5133884 - 102004450 AGCD01044704;AGCD01044705;GBDF01161890;XM_005395432;XM_013519823;XM_013519824;XM_013519825 XP_005395489;XP_013375277;XP_013375278;XP_013375279 MODEL 39134018 misc_rna 7SK 7SK RNA 39131813 rrna 5S_rRNA 5S ribosomal RNA 8744673 protein-coding Itpr2 inositol 1,4,5-trisphosphate receptor type 2 ENCODES a protein that exhibits calcium ion binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); inositol 1,4,5-trisphosphate-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to cAMP (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Brain Hypoxia (ortholog); Cardiomegaly (ortholog); FOUND IN axon (ortholog); cell cortex (ortholog); cytoplasm (ortholog) NW_004955413 21289673 21719610 - 102006014 AGCD01014249;AGCD01014250;AGCD01014251;AGCD01014252;AGCD01014253;AGCD01014254;AGCD01014255;AGCD01014256;AGCD01014257;AGCD01014258;AGCD01014259;AGCD01014260;AGCD01014261;GBBH01228681;GBDI01225022;XM_013511399 XP_013366853 MODEL 8733726 protein-coding LOC102011496 RAD52 motif-containing protein 1-like NW_004957952 76 531 + 102011496 AGCD01081348;GBDJ01230466;GBDJ01230469;XM_005415236 XP_005415293 MODEL 8966949 protein-coding CUNH12orf56 chromosome unknown C12orf56 homolog NW_004955458 11091456 11144074 - 102020531 AGCD01047717;AGCD01047718;AGCD01047719;AGCD01047720;AGCD01047721;AGCD01047722;AGCD01047723;GBBH01135200;GBDF01120995;XM_013520919 XP_013376373 MODEL 8750033 protein-coding Ier5l immediate early response 5 like NW_004955570 1479582 1482281 - 102026053 AGCD01074814;AGCD01074815;GBCE01054506;GBCQ01097922;XM_013509437 XP_013364891 MODEL 8885615 protein-coding Gprc5b G protein-coupled receptor class C group 5 member B ENCODES a protein that exhibits protein kinase activator activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); glucose homeostasis (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Megalencephalic Leukoencephalopathy with Subcortical Cysts 3 (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog); membrane raft (ortholog) NW_004955442 3548478 3571341 - 102011052 AGCD01037507;GBBH01090860;GBCQ01062670;XM_005391116 XP_005391173 MODEL 39134304 misc_rna 7SK 7SK RNA 39131538 protein-coding ABI3 ABI family member 3 39133716 misc_rna 7SK 7SK RNA 9053340 protein-coding Fbxo38 F-box protein 38 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); positive regulation of T cell activation (ortholog); positive regulation of T cell mediated immune response to tumor cell (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); autosomal dominant distal hereditary motor neuronopathy 6 (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955415 5841269 5888830 - 102004801 AGCD01016002;GBDI01216496;XM_005380634;XM_005380635;XM_005380636;XM_005380637;XM_005380638;XM_013512294 XP_005380691;XP_005380692;XP_005380693;XP_005380694;XP_005380695;XP_013367748 MODEL 9037904 protein-coding LOC102024450 equatorin-like NW_004955472 7589444 7603493 + 102024450 AGCD01053624;GBDF01045098;XM_005401147;XM_013522932;XM_013522933 XP_005401204;XP_013378386;XP_013378387 MODEL 8832337 protein-coding Kcnh4 potassium voltage-gated channel subfamily H member 4 NW_004955451 16217021 16233789 - 102013787 AGCD01043660;AGCD01043661;GBBH01113252;XM_013519388;XM_013519389;XM_013519390;XM_013519391 XP_013374842;XP_013374843;XP_013374844;XP_013374845 MODEL 8943913 protein-coding Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955546 1261231 1296420 + 102005639 AGCD01072044;AGCD01072045;AGCD01072046;AGCD01072047;GBDF01124482;XM_005411763;XM_005411764;XM_013508394;XR_264888 XP_005411820;XP_005411821;XP_013363848 MODEL 8953675 pseudo LOC102011094 ubiquitin-conjugating enzyme E2 D3-like NW_004955409 26283548 26284242 - 102011094 AGCD01010170 MODEL 9062330 pseudo LOC102014598 serine/Arginine-related protein 53-like NW_004955433 18418047 18443345 - 102014598 AGCD01031844 MODEL 9022604 protein-coding Dhrs11 dehydrogenase/reductase 11 ENCODES a protein that exhibits 17-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN steroid biosynthetic process (ortholog) NW_004955451 1335134 1343271 - 102029349 AGCD01042966;GBCE01152721;GBCQ01009204;XM_005393942 XP_005393999 MODEL 8835320 protein-coding Dpp3 dipeptidyl peptidase 3 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN protein catabolic process (ortholog); proteolysis (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; FOUND IN cytosol (ortholog) NW_004955422 18844391 18865050 - 102009851 AGCD01022964;GBCQ01096953;XM_005384397;XM_005384398;XM_013514061 XP_005384454;XP_005384455;XP_013369515 MODEL 9026840 protein-coding LOC102007682 olfactory receptor 5M3 NW_004955511 1640219 1641157 - 102007682 AGCD01066377;XM_005407968 XP_005408025 MODEL 8940667 protein-coding LOC102003753 olfactory receptor 51L1-like NW_004955414 21288601 21289554 + 102003753 AGCD01015411;XM_005380082 XP_005380139 MODEL 8774558 protein-coding LOC102014195 alpha-fetoprotein-like NW_004955611 38479 41119 - 102014195 AGCD01077139;GBBH01032074;GBBH01032078;XM_005414938 XP_005414995 MODEL 8943932 protein-coding Brpf3 bromodomain and PHD finger containing 3 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of DNA replication (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog); nucleus (ortholog) NW_004955437 3951160 3985133 + 102005966 AGCD01034358;GBCB01061515;GBCE01141854;XM_005389580 XP_005389637 MODEL 8765697 protein-coding LOC102010322 cytochrome P450 1A2 ENCODES a protein that exhibits caffeine oxidase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN alkaloid metabolic process (ortholog); cellular respiration (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; caffeine pharmacokinetics pathway; clomipramine pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); Atrophy (ortholog) NW_004955450 3165107 3171894 - 102010322 AGCD01042426;GBBH01140851;XM_005393544;XM_005393545 XP_005393601;XP_005393602 MODEL 8860096 pseudo LOC102009590 major facilitator superfamily domain-containing protein 8-like NW_004955467 9964828 9982343 - 102009590 AGCD01051537;AGCD01051538 MODEL 8900987 protein-coding Emx1 empty spiracles homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); brain morphogenesis (ortholog); cerebral cortex development (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955424 12666280 12683023 - 102021025 AGCD01024617;GBCQ01035827;XM_005385579 XP_005385636 MODEL 39134020 misc_rna 7SK 7SK RNA 8821940 ncrna LOC102013484 uncharacterized LOC102013484 NW_004955411 20773140 20790799 + 102013484 AGCD01012062;GBDF01156022;XR_001232796;XR_001232797;XR_259940 MODEL 8747662 pseudo LOC102013840 putative vomeronasal receptor-like protein 4 NW_004955494 8292174 8293063 - 102013840 AGCD01061582 MODEL 10328650 ncrna LOC106149925 uncharacterized LOC106149925 NW_004955457 13630497 13639479 + 106149925 AGCD01047049;XR_001236406;XR_001236407 MODEL 9013525 protein-coding LOC102020223 speedy protein E4-like NW_004955460 10642484 10644532 - 102020223 AGCD01048597;XM_005397967 XP_005398024 MODEL 8767484 protein-coding Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 ENCODES a protein that exhibits 11-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); NADP binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); glucocorticoid biosynthetic process (ortholog); glucocorticoid catabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH Abdominal Obesity (ortholog); allergic contact dermatitis (ortholog); coronary artery disease (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955489 2500928 2524715 - 102024016 AGCD01059871;GBDJ01212897;XM_005404538 XP_005404595 MODEL 8849279 ncrna LOC102020963 uncharacterized LOC102020963 NW_004955444 13521937 13535682 + 102020963 AGCD01039103;GBDF01226107;XR_001235528;XR_262268 MODEL 8916131 pseudo LOC102012714 heterogeneous nuclear ribonucleoprotein A3-like NW_004955402 57336253 57364330 - 102012714 AGCD01001495 MODEL 9010710 protein-coding Churc1 churchill domain containing 1 NW_004955466 4991571 5013568 - 102026091 AGCD01050864;AGCD01050865;GBCQ01011763;XM_005399116 XP_005399173 MODEL 8912829 protein-coding Cyria CYFIP related Rac1 interactor A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955487 9545639 9636183 - 102013618 AGCD01059461;GBCE01085376;XM_005404447;XM_005404449;XM_013504374 XP_005404504;XP_005404506;XP_013359828 MODEL 8754149 protein-coding LOC102013106 centrin-4-like NW_004955428 17966176 17970742 + 102013106 AGCD01028055;GBCQ01125606;XM_005386762;XM_005386763 XP_005386819;XP_005386820 MODEL 8743540 protein-coding Cplx1 complexin 1 ENCODES a protein that exhibits lipid binding (ortholog); SNARE binding (ortholog); INVOLVED IN insulin secretion (ortholog); regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); ASSOCIATED WITH Ataxia (ortholog); bipolar disorder (ortholog); developmental and epileptic encephalopathy 63 (ortholog); FOUND IN calyx of Held (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955514 359174 376916 - 102008249 AGCD01067008;GBCQ01034253;XM_005408677 XP_005408734 MODEL 8916737 protein-coding LOC102015691 transcriptional activator protein Pur-beta-like NW_004955406 7173526 7174308 - 102015691 AGCD01005767;XM_005375453 XP_005375510 MODEL 8773622 protein-coding LOC102019201 olfactory receptor 2D2-like NW_004955537 2630803 2631741 - 102019201 AGCD01070933;XM_005410628 XP_005410685 MODEL 8800744 ncrna LOC102017608 uncharacterized LOC102017608 NW_004955442 14552373 14553007 + 102017608 AGCD01037826;XR_001235384 MODEL 9036983 ncrna LOC102014202 uncharacterized LOC102014202 NW_004955404 1262946 1265247 + 102014202 AGCD01003223;GBDF01087339;XR_001235125;XR_259285 MODEL 8936849 pseudo LOC102005573 peroxiredoxin-1 pseudogene NW_004955410 34010516 34011152 - 102005573 AGCD01011394 MODEL 8812902 protein-coding Ankle2 ankyrin repeat and LEM domain containing 2 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN central nervous system development (ortholog); mitotic nuclear membrane reassembly (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Leukoencephalopathies (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955482 322251 353918 + 102018600 AGCD01057169;AGCD01057170;AGCD01057171;GBCE01114610;GBCQ01058651;XM_005402948 XP_005403005 MODEL 8800498 protein-coding LOC102008828 uncharacterized LOC102008828 NW_004955463 7162477 7169673 + 102008828 AGCD01049720;AGCD01049721;GBDF01056767;XM_013521489 XP_013376943 MODEL 9007832 protein-coding Abi3 ABI family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of lamellipodium assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) NW_004955451 12241084 12248857 - 102014000 AGCD01043379;AGCD01043380;GBDI01171609;XM_013519066 XP_013374520 MODEL 8876460 protein-coding LOC102009212 uncharacterized LOC102009212 NW_004955436 1320800 1334990 - 102009212 AGCD01033575;GBDK01015463;XM_013516600;XR_001234945;XR_001234946;XR_001234947;XR_001234948;XR_001234949;XR_261735;XR_261738 XP_013372054 MODEL 8995816 protein-coding Iffo1 intermediate filament family orphan 1 ENCODES a protein that exhibits cytoskeletal anchor activity (ortholog); INVOLVED IN DNA double-strand break attachment to nuclear envelope (ortholog); double-strand break repair via nonhomologous end joining (ortholog); protein localization to site of double-strand break (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); site of double-strand break (ortholog) NW_004955413 4167461 4180043 - 102016146 AGCD01013601;GBDJ01313478;XM_005378772;XM_005378774;XM_005378775;XM_005378776;XM_005378777 XP_005378829;XP_005378831;XP_005378832;XP_005378833;XP_005378834 MODEL 8717743 protein-coding Gprc5c G protein-coupled receptor class C group 5 member C FOUND IN plasma membrane (ortholog); receptor complex (ortholog) NW_004955553 1303176 1315482 + 102007816 AGCD01072878;GBCB01003226;XM_005412233;XM_013508636 XP_005412290;XP_013364090 MODEL 8906872 protein-coding Ddit4l DNA damage inducible transcript 4 like ASSOCIATED WITH melanoma (ortholog) NW_004955496 7618731 7622180 + 102003154 AGCD01062383;GBDJ01422210;XM_005406287 XP_005406344 MODEL 8709800 pseudo LOC102008454 uncharacterized LOC102008454 NW_004955436 22240028 22281455 + 102008454 AGCD01034088;AGCD01034089 MODEL 9014010 protein-coding Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ENCODES a protein that exhibits 3' overhang single-stranded DNA endodeoxyribonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cell development (ortholog); cell population proliferation (ortholog); chromosome organization (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN chromosome, telomeric region (ortholog); ERCC4-ERCC1 complex (ortholog); nucleoplasm (ortholog) NW_004955555 2393510 2430180 - 102012252 AGCD01073149;AGCD01073150;AGCD01073151;AGCD01073152;AGCD01073153;GBCB01023844;XM_005412522;XM_005412523;XM_005412524;XM_013508709;XM_013508710 XP_005412579;XP_005412580;XP_005412581;XP_013364163;XP_013364164 MODEL 8961405 protein-coding LOC102016467 signal-regulatory protein beta-1-like NW_004955470 300335 320458 - 102016467 AGCD01052609;GBCE01114114;XM_005400819 XP_005400876 MODEL 8944017 ncrna LOC102011945 uncharacterized LOC102011945 NW_004955405 15509552 15549105 + 102011945 AGCD01004947;AGCD01004948;GBDF01052663;XR_259378;XR_259379 MODEL 8951546 protein-coding LOC102016088 general transcription factor II-I repeat domain-containing protein 2A-like NW_004955524 3387847 3391357 + 102016088 AGCD01068893;GBDF01112543;XM_005409548 XP_005409605 MODEL 8901915 protein-coding LOC102014599 small integral membrane protein 12-like NW_004955434 12647780 12648124 + 102014599 AGCD01032389;XM_005388753 XP_005388810 MODEL 9026141 protein-coding Csk C-terminal Src kinase ENCODES a protein that exhibits identical protein binding (ortholog); proline-rich region binding (ortholog); protein kinase A catalytic subunit binding (ortholog); INVOLVED IN adherens junction organization (ortholog); cellular response to peptide hormone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH dermatitis (ortholog); Experimental Arthritis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 3127561 3144550 - 102010008 AGCD01042422;GBDI01060122;GBDK01080247;XM_005393543 XP_005393600 MODEL 9011802 protein-coding Il2 interleukin 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); cytokine activity (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN extracellular space (ortholog) NW_004955428 18163010 18168157 + 102015133 AGCD01028056;AGCD01028057;GBBH01190198;XM_005386770 XP_005386827 MODEL 8922323 protein-coding Dhrs13 dehydrogenase/reductase 13 NW_004955481 4270948 4276774 + 102019500 AGCD01056933;GBDF01146621;XM_005402708 XP_005402765 MODEL 39131814 rrna 5S_rRNA 5S ribosomal RNA 9031796 pseudo LOC102011501 60S ribosomal protein L9 pseudogene NW_004955406 3129354 3129909 + 102011501 AGCD01005665 MODEL 8943306 protein-coding Ciao1 cytosolic iron-sulfur assembly component 1 INVOLVED IN iron-sulfur cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Multiple mitochondrial dysfunctions syndrome 10 (ortholog); neuromuscular disease (ortholog); FOUND IN cytoplasm (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog); MMXD complex (ortholog) NW_004955470 3822606 3828563 + 102015831 AGCD01052712;GBDF01248841;XM_005400655 XP_005400712 MODEL 8932699 protein-coding CUNH12orf73 chromosome unknown C12orf73 homolog INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955405 38651787 38656564 - 102008056 AGCD01005482;GBBH01003432;XM_005374579 XP_005374636 MODEL 8785742 protein-coding Brs3 bombesin receptor subtype 3 ASSOCIATED WITH Hyperphagia (ortholog); hypertension (ortholog); obesity (ortholog); FOUND IN neuronal cell body (ortholog) NW_004955489 8627569 8631810 - 102013423 AGCD01060021;XM_005404590 XP_005404647 MODEL 8786448 pseudo LOC102013843 uncharacterized protein C14orf28 homolog pseudogene NW_004955423 27730673 27731556 - 102013843 AGCD01024139 MODEL 8986839 protein-coding Itpr3 inositol 1,4,5-trisphosphate receptor type 3 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion transport (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acrodermatitis (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955437 2055782 2106709 + 102009419 AGCD01034258;AGCD01034259;AGCD01034260;GBCE01054410;GBDJ01082282;XM_005389506 XP_005389563 MODEL 39134022 misc_rna 7SK 7SK RNA 39134307 misc_rna 7SK 7SK RNA 9027568 pseudo LOC102024456 serine/threonine-protein kinase Kist pseudogene NW_004955475 5028388 5029292 + 102024456 AGCD01054900 MODEL 8830807 ncrna LOC102019204 uncharacterized LOC102019204 NW_004955439 6299763 6305652 - 102019204 AGCD01035750;GBDF01188259;XR_261973 MODEL 9027487 protein-coding LOC102020557 L-lactate dehydrogenase C chain ENCODES a protein that exhibits L-lactate dehydrogenase (NAD+) activity (ortholog); INVOLVED IN ATP biosynthetic process (ortholog); flagellated sperm motility (ortholog); lactate biosynthetic process from pyruvate (ortholog); ASSOCIATED WITH lung disease (ortholog); male infertility (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 33109535 33138756 + 102020557 AGCD01015798;AGCD01015799;GBDF01007080;XM_005380415;XM_005380416;XM_013511839 XP_005380472;XP_005380473;XP_013367293 MODEL 8971700 pseudo LOC102011503 10 kDa heat shock protein, mitochondrial pseudogene NW_004955406 38802378 38802693 + 102011503 AGCD01006609 MODEL 39132016 rrna 5S_rRNA 5S ribosomal RNA 8705816 protein-coding Kcnh5 potassium voltage-gated channel subfamily H member 5 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); Developmental and Epileptic Encephalopathy 112 (ortholog); developmental and epileptic encephalopathy 12 (ortholog); FOUND IN cell surface (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955466 6704431 7042727 + 102010463 AGCD01050932;AGCD01050933;AGCD01050934;AGCD01050935;AGCD01050936;AGCD01050937;AGCD01050938;AGCD01050939;AGCD01050940;AGCD01050941;GBCQ01085123;XM_005399159 XP_005399216 MODEL 9063634 protein-coding Fbxo39 F-box protein 39 NW_004955467 12257700 12264977 + 102008520 AGCD01051627;GBBH01097078;XM_005399672;XM_005399673;XM_005399674;XM_005399675 XP_005399729;XP_005399730;XP_005399731;XP_005399732 MODEL 8875020 ncrna LOC102021702 uncharacterized LOC102021702 NW_004955531 3528962 3534395 + 102021702 AGCD01070075;GBDF01022393;XR_264714 MODEL 9056275 protein-coding LOC102007683 olfactory receptor 10AG1-like NW_004955511 725892 726854 - 102007683 AGCD01066341;XM_005408209 XP_005408266 MODEL 8781231 ncrna LOC102008455 uncharacterized LOC102008455 NW_004955437 7726888 7728942 - 102008455 AGCD01034465;GBDF01111441;XR_261864;XR_261865 MODEL 8961019 protein-coding LOC102003754 olfactory receptor 2AG1-like NW_004955414 22578726 22579673 + 102003754 AGCD01015464;XM_005380177 XP_005380234 MODEL 9045232 protein-coding LOC102012716 PRAME family member 23-like NW_004955618 152655 161495 - 102012716 AGCD01077302;AGCD01077303;AGCD01077304;XM_013510148 XP_013365602 MODEL 8721273 protein-coding Dpp4 dipeptidyl peptidase 4 ENCODES a protein that exhibits chemorepellent activity (ortholog); collagen binding (ortholog); dipeptidyl-peptidase activity (ortholog); INVOLVED IN B-1a B cell differentiation (ortholog); behavioral fear response (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Coronavirus infectious disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); endocytic vesicle (ortholog) NW_004955449 11795994 11873408 + 102019124 AGCD01042093;AGCD01042094;GBDJ01180000;XM_005393318;XM_005393319 XP_005393375;XP_005393376 MODEL 8716108 pseudo LOC102008096 60S ribosomal protein L6-like NW_004955477 11186663 11187511 - 102008096 AGCD01055719 MODEL 8840837 ncrna LOC102015324 uncharacterized LOC102015324 NW_004955494 1826458 1865444 + 102015324 AGCD01061424;GBCB01037072;XR_264104 MODEL 8828733 protein-coding LOC102009596 natural cytotoxicity triggering receptor 3 ligand 1-like NW_004955414 32190761 32204203 + 102009596 AGCD01015777;GBBH01134981;XM_005380382;XM_005380383;XM_013512027 XP_005380439;XP_005380440;XP_013367481 MODEL 39133724 misc_rna 7SK 7SK RNA 8707940 protein-coding LOC102013488 disintegrin and metalloproteinase domain-containing protein 29-like NW_004955466 20379 80896 + 102013488 AGCD01050641;AGCD01050642;AGCD01050643;AGCD01050644;AGCD01050645;AGCD01050646;AGCD01050647;AGCD01050648;AGCD01050649;XM_005399240 XP_005399297 MODEL 10242450 ncrna LOC106149926 uncharacterized LOC106149926 NW_004955457 13617255 13630462 + 106149926 AGCD01047049;XR_001236408 MODEL 8931661 pseudo LOC102020227 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955465 4834420 4837196 - 102020227 AGCD01050417 MODEL 9010377 ncrna LOC102011095 uncharacterized LOC102011095 NW_004955463 784664 786273 + 102011095 AGCD01049497;GBDF01014364;XR_263139 MODEL 8713032 protein-coding Hsd11b1l hydroxysteroid 11-beta dehydrogenase 1 like ENCODES a protein that exhibits cortisol dehydrogenase (NADP+) activity (ortholog) NW_004955495 3732550 3733625 - 102025022 AGCD01061879;GBDF01061504;XM_013505053 XP_013360507 MODEL 9040438 protein-coding LOC102013845 regenerating islet-derived protein 3-gamma-like NW_004955424 7354388 7357516 + 102013845 AGCD01024435;GBDF01061193;XM_005385459 XP_005385516 MODEL 9043490 protein-coding Brsk1 BR serine/threonine kinase 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); magnesium ion binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN associative learning (ortholog); axonogenesis (ortholog); centrosome duplication (ortholog); FOUND IN centrosome (ortholog); cholinergic synapse (ortholog); cytoplasm (ortholog) NW_004955567 924728 943092 - 102027122 AGCD01074446;AGCD01074447;GBCE01016557;GBDJ01062535;XM_013509249 XP_013364703 MODEL 8806117 protein-coding LOC102024459 arpin NW_004955416 15340070 15399017 + 102024459 AGCD01017323;AGCD01017324;AGCD01017325;AGCD01017326;GBDF01308168;XM_005381538 XP_005381595 MODEL 8771779 pseudo LOC102010323 40S ribosomal protein S20 pseudogene NW_004955596 302819 303144 - 102010323 AGCD01076514 MODEL 8756104 protein-coding Cyrib CYFIP related Rac1 interactor B ENCODES a protein that exhibits MHC class Ib protein binding, via antigen binding groove (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to molecule of bacterial origin (ortholog); negative regulation of actin filament polymerization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cilium (ortholog); mitochondrion (ortholog) NW_004955461 4634324 4786723 - 102006550 AGCD01048870;AGCD01048871;AGCD01048872;AGCD01048873;AGCD01048874;AGCD01048875;GBDI01133387;XM_005397991;XM_005397992;XM_005397993;XM_013521325;XM_013521326 XP_005398048;XP_005398049;XP_005398050;XP_013376779;XP_013376780 MODEL 8962711 ncrna LOC102013107 uncharacterized LOC102013107 NW_004955429 13692856 13696410 + 102013107 AGCD01028762;GBDF01283174;XR_261329 MODEL 9007818 protein-coding Fbxo4 F-box protein 4 ENCODES a protein that exhibits protein homodimerization activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); cellular response to ionizing radiation (ortholog); cellular senescence (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog); ubiquitin ligase complex (ortholog) NW_004955426 26046742 26066747 + 102013191 AGCD01026736;AGCD01026737;GBCQ01177989;GBDK01060205;XM_013514998 XP_013370452 MODEL 8877649 protein-coding Emx2 empty spiracles homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); colorectal cancer (ortholog); esophagus adenocarcinoma (ortholog) NW_004955431 22192446 22199141 + 102030337 AGCD01030511;GBDF01112545;XM_005387875 XP_005387932 MODEL 8847074 protein-coding Cplx2 complexin 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN positive regulation of synaptic plasticity (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); psychotic disorder (ortholog); schizophrenia (ortholog); FOUND IN calyx of Held (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955408 28308807 28388650 + 102007309 AGCD01008711;GBDF01186507;XM_005376364;XM_005376365 XP_005376421;XP_005376422 MODEL 9003787 protein-coding Egln1 egl-9 family hypoxia inducible factor 1 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); heart trabecula formation (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); atherosclerosis (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955492 7407800 7454851 + 102007130 AGCD01060797;AGCD01060798;GBCB01005053;GBCQ01067610;XM_005404970 XP_005405027 MODEL 8727921 protein-coding Dhrs3 dehydrogenase/reductase 3 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cardiac septum morphogenesis (ortholog); negative regulation of retinoic acid receptor signaling pathway (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Craniosynostosis Syndrome, Autosomal Recessive (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955486 1439179 1473476 + 102024235 AGCD01058955;AGCD01058956;GBCE01028543;XM_005403948 XP_005404005 MODEL 8709807 pseudo LOC102008830 ATP synthase F(0) complex subunit C3, mitochondrial pseudogene NW_004955464 13405011 13405720 + 102008830 AGCD01050275 MODEL 9026989 protein-coding Ciao2a cytosolic iron-sulfur assembly component 2A INVOLVED IN iron-sulfur cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog); nucleoplasm (ortholog) NW_004955450 11306099 11327688 + 102019655 AGCD01042653;AGCD01042654;AGCD01042655;GBDF01132346;XM_005393761;XM_005393762;XM_005393763 XP_005393818;XP_005393819;XP_005393820 MODEL 39132017 rrna 5S_rRNA 5S ribosomal RNA 8864262 protein-coding Gprc5d G protein-coupled receptor class C group 5 member D FOUND IN plasma membrane (ortholog) NW_004955413 9805848 9815616 - 102020899 AGCD01013913;XM_005378976;XM_005378977 XP_005379033;XP_005379034 MODEL 8822985 protein-coding Itprid1 ITPR interacting domain containing 1 NW_004955410 32564108 32691390 + 102025444 AGCD01011340;AGCD01011341;AGCD01011342;AGCD01011343;AGCD01011344;AGCD01011345;AGCD01011346;AGCD01011347;AGCD01011348;GBDK01242014;XM_005377516;XM_005377517;XM_005377522;XM_013510630;XM_013510631;XM_013510633 XP_005377573;XP_005377574;XP_005377579;XP_013366084;XP_013366085;XP_013366087 MODEL 8802380 protein-coding Abi3bp ABI family member 3 binding protein ENCODES a protein that exhibits actin filament binding (ortholog); collagen binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN dendritic shaft (ortholog); dendritic spine (ortholog); extracellular matrix (ortholog) NW_004955427 2362403 2581970 - 102024481 AGCD01026897;AGCD01026898;AGCD01026899;GBDK01304717;XM_005386307;XM_005386313;XM_013515130;XM_013515131;XM_013515132;XM_013515133;XM_013515134;XM_013515135;XM_013515136;XM_013515137;XM_013515138;XM_013515139;XM_013515140;XM_013515141;XM_013515142;XM_013515143;XM_013515144;XM_013515145;XM_013515146;XM_013515147;XM_013515148;XM_013515149;XM_013515150;XM_013515151;XM_013515152;XM_013515153;XM_013515154;XM_013515155 XP_005386364;XP_005386370;XP_013370584;XP_013370585;XP_013370586;XP_013370587;XP_013370588;XP_013370589;XP_013370590;XP_013370591;XP_013370592;XP_013370593;XP_013370594;XP_013370595;XP_013370596;XP_013370597;XP_013370598;XP_013370599;XP_013370600;XP_013370601;XP_013370602;XP_013370603;XP_013370604;XP_013370605;XP_013370606;XP_013370607;XP_013370608;XP_013370609 MODEL 8841640 protein-coding LOC102021703 IQ domain-containing protein F1 ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN positive regulation of acrosome reaction (ortholog); positive regulation of flagellated sperm motility involved in capacitation (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955532 3559990 3561238 - 102021703 AGCD01070287;GBDF01010023;XM_005410328 XP_005410385 MODEL 8877323 protein-coding LOC102015695 olfactory receptor 10A7 NW_004955458 2359659 2360621 + 102015695 AGCD01047227;XM_005397494 XP_005397551 MODEL 9038088 protein-coding LOC102007688 spermatogenesis-associated protein 31E1-like NW_004955515 2514202 2517200 - 102007688 AGCD01067256;GBDK01098218;XM_005408922;XM_013506865 XP_005408979;XP_013362319 MODEL 8751760 ncrna LOC102012718 uncharacterized LOC102012718 NW_004955403 26534439 26537509 + 102012718 AGCD01002308;GBCB01077504;XR_001233580;XR_259205 MODEL 8821945 protein-coding Cskmt citrate synthase lysine methyltransferase ENCODES a protein that exhibits lysine N-methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine dimethylation (ortholog); peptidyl-lysine monomethylation (ortholog); peptidyl-lysine trimethylation (ortholog); FOUND IN mitochondrion (ortholog) NW_004955599 545490 546972 - 102013989 AGCD01076658;GBCE01109441;XM_005414785 XP_005414842 MODEL 8730291 protein-coding LOC102017609 RIMS-binding protein 3A-like NW_004955442 17581675 17586967 + 102017609 AGCD01037968;GBDF01001981;XM_005391709 XP_005391766 MODEL 8991663 ncrna LOC102014205 uncharacterized LOC102014205 NW_004955405 34201814 34209313 - 102014205 AGCD01005369;GBDF01287702;XR_259428 MODEL 8776970 protein-coding Il20 interleukin 20 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-20 receptor binding (ortholog); interleukin-22 receptor binding (ortholog); INVOLVED IN positive regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); end stage renal disease (ortholog); Experimental Arthritis (ortholog); FOUND IN extracellular space (ortholog) NW_004955406 42398510 42401561 + 102008495 AGCD01006706;XM_005375485 XP_005375542 MODEL 8775674 protein-coding LOC102008105 translation initiation factor IF-2-like NW_004955481 3628568 3637628 - 102008105 AGCD01056909;GBDI01140316;XM_005402923 XP_005402980 MODEL 8880268 protein-coding Brsk2 BR serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); ATPase binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axonogenesis (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); distal axon (ortholog) NW_004955476 10911515 10951544 - 102003123 AGCD01055431;GBDF01194489;XM_013502987;XM_013502988;XM_013502989;XM_013502990;XM_013502991;XM_013502992;XM_013502993;XM_013502994;XR_001230801 XP_013358441;XP_013358442;XP_013358443;XP_013358444;XP_013358445;XP_013358446;XP_013358447;XP_013358448 MODEL 9050973 pseudo LOC102005574 ATP-binding cassette sub-family F member 2-like NW_004955463 4656863 4661099 + 102005574 AGCD01049614 MODEL 39134024 misc_rna 7SK 7SK RNA 8712631 ncrna LOC102009219 uncharacterized LOC102009219 NW_004955438 11481547 11499549 - 102009219 AGCD01035239;AGCD01035240;GBDF01306429;XR_261927 MODEL 8835666 protein-coding CUNH12orf75 chromosome unknown C12orf75 homolog NW_004955405 39595762 39623671 + 102018154 AGCD01005502;GBDF01133707;XM_005374610;XM_013518997 XP_005374667;XP_013374451 MODEL 39133725 misc_rna 7SK 7SK RNA 39131349 protein-coding DDN dendrin 8987028 protein-coding Ankmy1 ankyrin repeat and MYND domain containing 1 NW_004955542 910258 943546 + 102016310 AGCD01071485;GBCE01072530;XM_005411157;XM_005411158;XM_005411159;XM_005411160;XM_005411161;XM_005411162;XM_005411163;XM_005411164;XM_005411165 XP_005411214;XP_005411215;XP_005411216;XP_005411217;XP_005411218;XP_005411219;XP_005411220;XP_005411221;XP_005411222 MODEL 8835506 protein-coding LOC102013491 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10981913 11033217 - 102013491 AGCD01051593;AGCD01051594;AGCD01051595;AGCD01051596;AGCD01051597;GBDK01014412;XM_013522161;XM_013522162;XM_013522163;XM_013522164 XP_013377615;XP_013377616;XP_013377617;XP_013377618 MODEL 8814551 ncrna LOC102019205 uncharacterized LOC102019205 NW_004955441 14672459 14678221 + 102019205 AGCD01037214;GBDF01176341;XR_262080 MODEL 8989404 pseudo LOC102016469 heat shock protein HSP 90-beta pseudogene NW_004955472 2722752 2724357 - 102016469 AGCD01053489 MODEL 8861772 protein-coding LOC102020964 guanine nucleotide-binding protein G(s) subunit alpha NW_004955445 680391 734796 - 102020964 AGCD01039322;AGCD01039323;GBCC01000922;XM_005392216;XM_005392217;XM_005392218;XM_005392229 XP_005392273;XP_005392274;XP_005392275;XP_005392286 MODEL 8960611 ncrna LOC102011946 uncharacterized LOC102011946 NW_004955452 12789670 12791076 - 102011946 AGCD01044366;GBDF01032085;XR_262681 MODEL 8995647 protein-coding Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); bone mineralization (ortholog); cell population proliferation (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acquired immunodeficiency syndrome (ortholog); acute leukemia (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cytoplasm (ortholog); MMXD complex (ortholog) NW_004955555 2355005 2369599 - 102009659 AGCD01073148;GBDF01126874;XM_005412511;XM_005412512;XM_013508701 XP_005412568;XP_005412569;XP_013364155 MODEL 8979985 ncrna LOC102016089 uncharacterized LOC102016089 NW_004955436 2444597 2454363 + 102016089 AGCD01033609;GBDF01080729;XR_261746 MODEL 8834657 ncrna LOC102014600 uncharacterized LOC102014600 NW_004955435 8468203 8547531 + 102014600 AGCD01033003;AGCD01033004;GBCQ01067414;XR_001234835;XR_001234836;XR_001234837;XR_261674 MODEL 9003751 protein-coding LOC102003755 uncharacterized LOC102003755 NW_004955470 10483806 10485953 - 102003755 AGCD01052870;GBDF01294395;XM_005400841 XP_005400898 MODEL 8841152 ncrna LOC102024462 uncharacterized LOC102024462 NW_004955417 29298430 29304548 - 102024462 AGCD01018595;AGCD01018596;GBDF01180782;XR_001233401;XR_001233402 MODEL 8723354 ncrna LOC102010324 uncharacterized LOC102010324 NW_004955403 1876109 1880828 - 102010324 AGCD01001726;GBCQ01179100;XR_259132 MODEL 8901081 protein-coding Kcnh6 potassium voltage-gated channel subfamily H member 6 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH glucose metabolism disease (ortholog) NW_004955478 8242953 8263369 - 102026002 AGCD01056016;GBBH01106870;XM_005402207;XM_005402210;XM_005402211;XM_013503169 XP_005402264;XP_005402267;XP_005402268;XP_013358623 MODEL 8859445 protein-coding LOC102013110 membrane-spanning 4-domains subfamily A member 12-like NW_004955511 4782390 4792412 - 102013110 AGCD01066526;XM_013506411 XP_013361865 MODEL 9037717 protein-coding LOC102015326 zinc finger protein 317 NW_004955495 265957 274463 + 102015326 AGCD01061616;AGCD01061617;GBDF01253179;XM_005405549 XP_005405606 MODEL 39134310 misc_rna 7SK 7SK RNA 8958627 protein-coding Iffo2 intermediate filament family orphan 2 NW_004955527 294950 332716 + 102017494 AGCD01069380;AGCD01069381;GBCE01013302;XM_005409798;XM_005409799 XP_005409855;XP_005409856 MODEL 8706873 protein-coding LOC102020558 olfactory receptor 52B4-like NW_004955414 20016773 20017717 + 102020558 AGCD01015350;XM_005380462 XP_005380519 MODEL 8812279 protein-coding LOC102020241 olfactory receptor 52B4-like NW_004955414 20006584 20007528 + 102020241 AGCD01015350;XM_005380461 XP_005380518 MODEL 10251931 ncrna LOC106149927 uncharacterized LOC106149927 NW_004955406 12958083 12984947 - 106149927 AGCD01005929;AGCD01005930;GBDF01144794;XR_001236410 MODEL 8839748 protein-coding En1 engrailed homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cerebellum development (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); ENDOVE SYNDROME, LIMB-BRAIN TYPE (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955459 10839581 10844198 + 102008704 AGCD01048200;GBCB01074283;XM_005397707 XP_005397764 MODEL 8700366 protein-coding LOC102008833 olfactory receptor 1F12 NW_004955465 13529663 13530604 + 102008833 AGCD01050613;XM_005398956 XP_005399013 MODEL 8886726 protein-coding Brwd1 bromodomain and WD repeat domain containing 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); male infertility (ortholog); oligospermia (ortholog); FOUND IN axoneme (ortholog); motile cilium (ortholog); nucleolus (ortholog) NW_004955407 38003386 38107958 - 102022466 AGCD01007792;AGCD01007793;AGCD01007794;GBCB01009000;GBDJ01213321;XM_013504832;XM_013504835;XM_013504839 XP_013360286;XP_013360289;XP_013360293 MODEL 8992201 protein-coding Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 ENCODES a protein that exhibits 11-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); NAD binding (ortholog); steroid binding (ortholog); INVOLVED IN cortisol metabolic process (ortholog); female pregnancy (ortholog); glucocorticoid metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH apparent mineralocorticoid excess syndrome (ortholog); asthma (ortholog); fetal alcohol spectrum disorder (ortholog) NW_004955484 9206681 9212356 - 102003139 AGCD01058412;GBCQ01007229;GBDJ01009024;XM_005403649 XP_005403706 MODEL 8950643 pseudo LOC102008467 E3 ubiquitin-protein ligase HECTD3 pseudogene NW_004955442 14068251 14074752 - 102008467 AGCD01037801 MODEL 39131815 rrna 5S_rRNA 5S ribosomal RNA 8861576 ncrna LOC102013495 uncharacterized LOC102013495 NW_004955468 8052975 8220399 + 102013495 AGCD01052019;AGCD01052020;AGCD01052021;AGCD01052022;AGCD01052023;GBCQ01143499;XR_001236948;XR_263403;XR_263404 MODEL 8963997 protein-coding Gprc6a G protein-coupled receptor class C group 6 member A ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH disorder of sexual development (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955436 137809 159481 - 102006948 AGCD01033535;XM_005389118 XP_005389175 MODEL 9037012 protein-coding Dpp6 dipeptidyl peptidase like 6 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN neuronal action potential (ortholog); positive regulation of potassium ion transmembrane transport (ortholog); positive regulation of potassium ion transport (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 33 (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); neuronal cell body (ortholog) NW_004955491 7325720 8167949 + 102015118 AGCD01060595;AGCD01060596;AGCD01060597;AGCD01060598;AGCD01060599;AGCD01060600;AGCD01060601;AGCD01060602;AGCD01060603;AGCD01060604;AGCD01060605;AGCD01060606;AGCD01060607;AGCD01060608;AGCD01060609;GBCE01067536;XM_005404852;XM_005404853;XM_005404854;XM_005404855 XP_005404909;XP_005404910;XP_005404911;XP_005404912 MODEL 8983275 pseudo LOC102021709 60S ribosomal protein L6-like NW_004955439 8223203 8224183 + 102021709 AGCD01035783 MODEL 8927989 protein-coding LOC102011504 keratin-associated protein 8-1 NW_004955407 30527468 30528014 - 102011504 AGCD01007636;XM_005375654 XP_005375711 MODEL 8779832 protein-coding Fbxo40 F-box protein 40 INVOLVED IN muscle cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog) NW_004955427 20979180 20996654 + 102003263 AGCD01027430;AGCD01027431;GBCB01006048;XM_005386488;XM_005386489 XP_005386545;XP_005386546 MODEL 8945721 ncrna LOC102011096 uncharacterized LOC102011096 NW_004955463 13120267 13130733 + 102011096 AGCD01049861;GBBH01212613;XR_001236627 MODEL 8840791 pseudo LOC102013847 T-complex protein 1 subunit zeta pseudogene NW_004955497 4429226 4430102 - 102013847 AGCD01062575 MODEL 8797341 protein-coding Egln2 egl-9 family hypoxia inducible factor 2 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); ferrous iron binding (ortholog); oxygen sensor activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); peptidyl-proline hydroxylation to 4-hydroxy-L-proline (ortholog); positive regulation of protein catabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955578 541723 557609 - 102003188 AGCD01075488;AGCD01075489;GBDK01016596;XM_005414013;XM_005414014;XR_265083 XP_005414070;XP_005414071 MODEL 8716485 protein-coding Ifi16 interferon gamma inducible protein 16 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); identical protein binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear inclusion body (ortholog) NW_004955468 10828726 10845853 + 102029846 AGCD01052105;GBDI01294199;XM_013522456;XM_013522457;XR_001236915 XP_013377910;XP_013377911 MODEL 8831303 pseudo LOC102009222 C-Myc-binding protein pseudogene NW_004955440 3127945 3130866 - 102009222 AGCD01036236 MODEL 8976349 pseudo LOC102020560 gamma-soluble NSF attachment protein pseudogene NW_004955475 903589 940616 + 102020560 AGCD01054718;AGCD01054719;AGCD01054720 MODEL 8751525 protein-coding Ciao2b cytosolic iron-sulfur assembly component 2B INVOLVED IN chromosome segregation (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955433 23435373 23437383 - 102028007 AGCD01031962;GBDJ01268522;XM_005388490 XP_005388547 MODEL 9065271 protein-coding Abitram actin binding transcription modulator ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); regulation of actin filament polymerization (ortholog); regulation of filopodium assembly (ortholog); FOUND IN dendrite (ortholog); filopodium tip (ortholog); growth cone (ortholog) NW_004955419 18029763 18034945 - 102021243 AGCD01020168;GBCE01011765;XM_005382759 XP_005382816 MODEL 8809165 pseudo LOC102011948 NF-kappa-B inhibitor-interacting Ras-like protein 1 NW_004955453 11424663 11425286 - 102011948 AGCD01044807 MODEL 8976857 pseudo LOC102009597 mitochondrial fission factor-like NW_004955414 11395994 11396843 - 102009597 AGCD01015082 MODEL 8963093 protein-coding Itprid2 ITPR interacting domain containing 2 ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH retinitis pigmentosa (ortholog); FOUND IN cytosol (ortholog) NW_004955403 15386116 15421284 - 102029693 AGCD01002044;GBDF01050320;GBDJ01138296;XM_005373880 XP_005373937 MODEL 8945466 protein-coding Ddn dendrin ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955500 7828759 7833397 - 102028559 AGCD01063951;AGCD01063952;GBCQ01030325;XM_013505680;XM_013505681 XP_013361134;XP_013361135 MODEL 8850817 pseudo LOC102014601 periphilin-1-like NW_004955529 113816 115229 - 102014601 AGCD01069622 MODEL 8848377 protein-coding LOC102017611 natural cytotoxicity triggering receptor 1-like NW_004955567 1860919 1864038 - 102017611 AGCD01074494;AGCD01074495;GBDI01309508;GBDK01092488;XM_005413395 XP_005413452 MODEL 8726016 pseudo LOC102007689 DNA-3-methyladenine glycosylase pseudogene NW_004955516 1140332 1141187 + 102007689 AGCD01067413 MODEL 8920420 ncrna LOC102012719 uncharacterized LOC102012719 NW_004955403 40191140 40192388 - 102012719 AGCD01002668;AGCD01002669;GBDF01211863;XR_259232 MODEL 8936288 ncrna LOC102014209 uncharacterized LOC102014209 NW_004955406 20144960 20150756 - 102014209 AGCD01006099;AGCD01006100;GBDI01275825;XR_001236593 MODEL 8844418 ncrna LOC102024464 uncharacterized LOC102024464 NW_004955419 14164557 14168244 - 102024464 AGCD01020013;GBDJ01026578;XR_001233568 MODEL 8700349 ncrna LOC102008106 uncharacterized LOC102008106 NW_004955482 4507858 4511301 + 102008106 AGCD01057294;GBDF01156183;XR_001230999 MODEL 9018971 protein-coding Ciao3 cytosolic iron-sulfur assembly component 3 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); intracellular oxygen homeostasis (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH hereditary hemorrhagic telangiectasia (ortholog); High Myopia (ortholog); FOUND IN cytosolic [4Fe-4S] assembly targeting complex (ortholog) NW_004955442 16465759 16475110 + 102018656 AGCD01037901;GBDK01237086;XM_005391615 XP_005391672 MODEL 8993695 protein-coding Dhrs7b dehydrogenase/reductase 7B ENCODES a protein that exhibits acylglycerone-phosphate reductase (NADP+) activity (ortholog); DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); ether lipid biosynthetic process (ortholog); FOUND IN membrane (ortholog); nucleus (ortholog); peroxisomal membrane (ortholog) NW_004955577 1071904 1122204 + 102022241 AGCD01075435;AGCD01075436;GBDF01008512;XM_005413986;XM_005413987;XM_013509623 XP_005414043;XP_005414044;XP_013365077 MODEL 8826103 protein-coding Il20ra interleukin 20 receptor subunit alpha ENCODES a protein that exhibits interleukin-20 binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); regulation of bone resorption (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); toxic shock syndrome (ortholog) NW_004955436 22281422 22323242 + 102020707 AGCD01034089;AGCD01034090;AGCD01034091;AGCD01034092;AGCD01034093;GBBH01193661;XM_005389282;XM_005389283;XM_005389284;XM_013516702 XP_005389339;XP_005389340;XP_005389341;XP_013372156 MODEL 39134025 misc_rna 7SK 7SK RNA 8811877 protein-coding LOC102005576 histone H2B NW_004955465 13104644 13110046 - 102005576 AGCD01050585;GBDF01248769;XM_005398947 XP_005399004 MODEL 8872121 ncrna LOC102011505 uncharacterized LOC102011505 NW_004955456 6097044 6102845 - 102011505 AGCD01046363;GBDF01134376;XR_262883 MODEL 8947897 protein-coding CUNH13orf46 chromosome unknown C13orf46 homolog NW_004955404 227635 237264 + 102026067 AGCD01003198;GBDF01006237;XM_005373922 XP_005373979 MODEL 39132018 rrna 5S_rRNA 5S ribosomal RNA 9053083 ncrna LOC102020965 uncharacterized LOC102020965 NW_004955445 7023839 7027598 - 102020965 AGCD01039532;GBDF01292008;XR_001235622;XR_001235623;XR_262307 MODEL 8713337 pseudo LOC102011101 HAUS augmin-like complex subunit 6 pseudogene NW_004955467 12349080 12357812 + 102011101 AGCD01051631;XR_263364 MODEL 8874955 pseudo LOC102020243 40S ribosomal protein SA-like NW_004955475 371163 378458 + 102020243 AGCD01054687 MODEL 9055104 ncrna LOC102015696 uncharacterized LOC102015696 NW_004955409 6044092 6050179 + 102015696 AGCD01009329;GBDF01110555;XR_001232625;XR_259756 MODEL 8843732 protein-coding Egln3 egl-9 family hypoxia inducible factor 3 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); peptidyl-proline 4-dioxygenase activity (ortholog); peptidyl-proline dioxygenase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of ferroptosis (ortholog); protein hydroxylation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); clear cell renal cell carcinoma (ortholog); Kidney Reperfusion Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955409 26939933 26967156 + 102007741 AGCD01010203;GBCQ01004650;XM_005376943 XP_005377000 MODEL 8860724 protein-coding LOC102008468 vomeronasal type-2 receptor 116-like NW_004955563 153803 168288 + 102008468 AGCD01074047;AGCD01074048;AGCD01074049;XM_005413196 XP_005413253 MODEL 8991493 protein-coding Cplx3 complexin 3 ENCODES a protein that exhibits neurotransmitter transmembrane transporter activity (ortholog); SNARE binding (ortholog); INVOLVED IN insulin secretion (ortholog); regulation of neurotransmitter secretion (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); photoreceptor ribbon synapse (ortholog) NW_004955450 3105364 3110246 - 102009130 AGCD01042422;XM_005393540 XP_005393597 MODEL 9005725 protein-coding Hsd17b1 hydroxysteroid 17-beta dehydrogenase 1 ENCODES a protein that exhibits 17-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); estradiol binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); cellular response to metal ion (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); endometriosis (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955451 16449333 16452036 + 102019459 AGCD01043677;AGCD01043678;GBCQ01028037;XM_005394464 XP_005394521 MODEL 8754435 protein-coding Csmd1 CUB and Sushi multiple domains 1 INVOLVED IN conditioned place preference (ortholog); female gonad development (ortholog); gene expression (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Asthma-Chronic Obstructive Pulmonary Disease Overlap Syndrome (ortholog); autism spectrum disorder (ortholog) NW_004955403 55809895 57101986 + 102023972 AGCD01003127;AGCD01003128;AGCD01003129;AGCD01003130;AGCD01003131;AGCD01003132;AGCD01003133;AGCD01003134;AGCD01003135;AGCD01003136;AGCD01003137;AGCD01003138;AGCD01003139;AGCD01003140;AGCD01003141;AGCD01003142;AGCD01003143;AGCD01003144;AGCD01003145;AGCD01003146;AGCD01003147;AGCD01003148;GBDF01244781;XM_005373917 XP_005373974 MODEL 8957875 protein-coding LOC102008838 V-set and immunoglobulin domain-containing protein 8 NW_004955468 11648880 11658624 - 102008838 AGCD01052136;GBDK01042318;XM_005400177;XM_005400178 XP_005400234;XP_005400235 MODEL 9052841 pseudo LOC102013112 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955514 556735 557501 + 102013112 AGCD01067014 MODEL 39133726 misc_rna 7SK 7SK RNA 39134313 misc_rna 7SK 7SK RNA 8708291 protein-coding Dpp7 dipeptidyl peptidase 7 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); Experimental Liver Cirrhosis (ortholog); Necrosis (ortholog); FOUND IN lysosome (ortholog); vesicle (ortholog) NW_004955513 5105833 5109676 + 102004102 AGCD01066956;GBDI01001030;XM_005408580;XM_013506709 XP_005408637;XP_013362163 MODEL 9033332 ncrna LOC102019210 uncharacterized LOC102019210 NW_004955443 7120644 7141367 + 102019210 AGCD01038273;GBDF01245079;XR_001235484 MODEL 8992992 protein-coding Cys1 cystin 1 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN inner ear development (ortholog); kidney development (ortholog); obsolete negative regulation of DNA-binding transcription factor activity (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); stomach cancer (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955487 5455820 5461362 - 102027752 AGCD01059333;AGCD01059334;GBBH01180330;GBCQ01098223;XM_013504397 XP_013359851 MODEL 9049982 protein-coding Ankmy2 ankyrin repeat and MYND domain containing 2 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH High Myopia (ortholog) NW_004955410 19778736 19812731 - 102021321 AGCD01011030;GBCC01042899;GBDK01280338;XM_013510568 XP_013366022 MODEL 8841483 protein-coding LOC102013850 S-methylmethionine--homocysteine S-methyltransferase BHMT2 NW_004955425 22029596 22040812 - 102013850 AGCD01025812;GBDK01350932;XM_005386016 XP_005386073 MODEL 8842198 protein-coding Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN apoptotic process (ortholog); DNA repair (ortholog); DNA topological change (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); asphyxia neonatorum (ortholog); FOUND IN nucleoplasm (ortholog); transcription factor TFIID complex (ortholog); transcription factor TFIIH core complex (ortholog) NW_004955459 3210936 3238401 + 102005903 AGCD01048010;AGCD01048011;GBDJ01135141;XM_005397616;XM_005397617;XM_013521085 XP_005397673;XP_005397674;XP_013376539 MODEL 9026129 protein-coding LOC102009223 cytochrome P450 1B1 ENCODES a protein that exhibits estrogen 16-alpha-hydroxylase activity (ortholog); heme binding (ortholog); monooxygenase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); angiogenesis (ortholog); arachidonate metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adenoma (ortholog); anterior segment dysgenesis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955441 5803397 5812131 - 102009223 AGCD01036887;GBDF01179111;XM_005390882;XM_013517545 XP_005390939;XP_013372999 MODEL 8976105 ncrna LOC102011951 uncharacterized LOC102011951 NW_004955455 571092 575802 - 102011951 AGCD01045562;XR_262804;XR_262805 MODEL 9061456 protein-coding LOC102010328 putative tripartite motif-containing protein 64C NW_004955790 9857 10650 + 102010328 AGCD01078353;XM_013510192 XP_013365646 MODEL 8801982 protein-coding LOC102003756 olfactory receptor 52E8-like NW_004955414 21787675 21788613 + 102003756 AGCD01015432;XM_005380430 XP_005380487 MODEL 8734363 pseudo LOC102015328 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 pseudogene NW_004955425 22681002 22682303 + 102015328 AGCD01025827;XM_005386021 MODEL 9038402 pseudo LOC102014602 zinc fingers and homeoboxes protein 3-like NW_004955530 3570059 3572631 - 102014602 AGCD01069957 MODEL 8708721 pseudo LOC102021711 disintegrin and metalloproteinase domain-containing protein 10 pseudogene NW_004955550 500606 504358 - 102021711 AGCD01072509 MODEL 8947028 protein-coding Gprin1 G protein regulated inducer of neurite outgrowth 1 ENCODES a protein that exhibits phosphoprotein binding (ortholog); INVOLVED IN neuron projection development (ortholog); FOUND IN plasma membrane (ortholog) NW_004955408 28871379 28884961 - 102014645 AGCD01008733;GBDF01067460;XM_005376391;XM_005376392;XM_005376393 XP_005376448;XP_005376449;XP_005376450 MODEL 8960685 protein-coding Kcnh7 potassium voltage-gated channel subfamily H member 7 ENCODES a protein that exhibits heme binding (ortholog); inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN circadian rhythm (ortholog); potassium ion transport (ortholog) NW_004955449 11052767 11495193 + 102016437 AGCD01042083;AGCD01042084;AGCD01042085;AGCD01042086;AGCD01042087;AGCD01042088;AGCD01042089;AGCD01042090;AGCD01042091;XM_013518746 XP_013374200 MODEL 8984806 protein-coding Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ENCODES a protein that exhibits actin filament binding (ortholog); ATP binding (ortholog); bubble DNA binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); activated T cell proliferation (ortholog); PARTICIPATES IN p53 signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell leading edge (ortholog); cytoplasm (ortholog) NW_004955513 652048 799182 + 102017368 AGCD01066829;AGCD01066830;AGCD01066831;AGCD01066832;GBDF01082882;XM_005408347;XM_005408348 XP_005408404;XP_005408405 MODEL 8986999 gene LOC102015697 T-cell receptor alpha chain C region-like NW_004955409 37699401 38540341 - 102015697 AGCD01010533;AGCD01010534;AGCD01010535;AGCD01010536;AGCD01010537;AGCD01010538;AGCD01010539;AGCD01010540;AGCD01010541;AGCD01010542;AGCD01010543;AGCD01010544;AGCD01010545;AGCD01010546;AGCD01010547;AGCD01010548;AGCD01010549;AGCD01010550;AGCD01010551;AGCD01010552;AGCD01010553;AGCD01010554;AGCD01010555;AGCD01010556;AGCD01010557;AGCD01010558;AGCD01010559;AGCD01010560;XM_005377133 MODEL 8760135 protein-coding LOC102024465 olfactory receptor 50-like NW_004955419 5591431 5598017 - 102024465 AGCD01019827;XM_005382925 XP_005382982 MODEL 8869504 pseudo LOC102008107 olfactory receptor 56-like NW_004955418 29732474 29747780 + 102008107 AGCD01019481 MODEL 8962195 ncrna LOC102020564 uncharacterized LOC102020564 NW_004955478 2028321 2032929 - 102020564 AGCD01055783;GBDF01248867;XR_263685 MODEL 8979505 pseudo LOC102021719 60S ribosomal protein L26-like NW_004955448 10606482 10609803 - 102021719 AGCD01041495 MODEL 8984780 pseudo LOC102016096 zinc finger protein 606 pseudogene NW_004955437 6967643 6969974 - 102016096 AGCD01034448 MODEL 8832297 protein-coding Ifi30 IFI30 lysosomal thiol reductase ENCODES a protein that exhibits oxidoreductase activity, acting on a sulfur group of donors (ortholog); oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); negative regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN lysosome (ortholog) NW_004955524 3229024 3230955 - 102010831 AGCD01068868;GBBH01004304;GBCB01022981;XM_013507264 XP_013362718 MODEL 8943358 protein-coding Fbxo41 F-box protein 41 INVOLVED IN chemical synaptic transmission (ortholog); dentate gyrus development (ortholog); gene expression (ortholog) NW_004955424 12339588 12378116 + 102016290 AGCD01024604;XM_005385563;XM_005385564;XM_005385565;XM_005385566;XM_013514580 XP_005385620;XP_005385621;XP_005385622;XP_005385623;XP_013370034 MODEL 8904613 pseudo LOC102011508 small glutamine-rich tetratricopeptide repeat-containing protein beta pseudogene NW_004955458 14795983 14797440 + 102011508 AGCD01047847 MODEL 39132020 rrna 5S_rRNA 5S ribosomal RNA 9007062 ncrna LOC102011112 uncharacterized LOC102011112 NW_004955415 26765225 26765881 - 102011112 AGCD01016604;XR_260318 MODEL 8945134 pseudo LOC102012720 translationally-controlled tumor protein pseudogene NW_004955403 40178459 40178980 - 102012720 AGCD01002666 MODEL 8933653 ncrna LOC102016474 uncharacterized LOC102016474 NW_004955478 10412000 10415456 + 102016474 AGCD01056133;GBDF01003391;XR_263715 MODEL 8734358 pseudo LOC102014211 28S ribosomal protein S36, mitochondrial pseudogene NW_004955407 3015541 3015967 + 102014211 AGCD01006848 MODEL 39134027 misc_rna 7SK 7SK RNA 8826709 protein-coding Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ENCODES a protein that exhibits 3' overhang single-stranded DNA endodeoxyribonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); autosomal recessive cerebellar ataxia (ortholog); B-cell acute lymphoblastic leukemia (ortholog); FOUND IN chromosome, telomeric region (ortholog); ERCC4-ERCC1 complex (ortholog); nuclear body (ortholog) NW_004955442 4833453 4861201 - 102018773 AGCD01037543;AGCD01037544;AGCD01037545;GBDI01017324;XM_005391144;XM_013517964 XP_005391201;XP_013373418 MODEL 9030976 protein-coding En2 engrailed homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic brain development (ortholog); gene expression (ortholog); hindbrain development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Parkinsonism (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955491 8422295 8427038 + 102006355 AGCD01060616;GBCQ01057725;XM_013504574 XP_013360028 MODEL 10354886 ncrna LOC106149928 uncharacterized LOC106149928 NW_004955457 12921287 12930631 + 106149928 AGCD01047033;XR_001236411 MODEL 8943228 protein-coding Dhrs7c dehydrogenase/reductase 7C ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN D-glucose import across plasma membrane (ortholog); intracellular calcium ion homeostasis (ortholog); obsolete D-glucose import (ortholog); FOUND IN longitudinal sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) NW_004955467 7330267 7341897 + 102008610 AGCD01051433;GBDI01135172;XM_005399376 XP_005399433 MODEL 9067841 protein-coding Ciapin1 cytokine induced apoptosis inhibitor 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); iron ion binding (ortholog); INVOLVED IN hemopoiesis (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955433 15065031 15081392 - 102027104 AGCD01031745;GBBH01165720;XM_005388390;XM_005388391;XM_013516203;XM_013516204;XM_013516205 XP_005388447;XP_005388448;XP_013371657;XP_013371658;XP_013371659 MODEL 8949389 ncrna LOC102013113 uncharacterized LOC102013113 NW_004955432 22553707 22573140 - 102013113 AGCD01031262;GBDJ01369374;XR_001234681;XR_001234682;XR_001234683;XR_001234684;XR_001234685;XR_001234686;XR_001234687;XR_001234688;XR_001234689 MODEL 8890803 ncrna LOC102019212 uncharacterized LOC102019212 NW_004955444 6086193 6102188 - 102019212 AGCD01038849;GBCB01024205;XR_262243 MODEL 9005605 ncrna LOC102013496 uncharacterized LOC102013496 NW_004955414 14859238 14895910 - 102013496 AGCD01015161;GBDF01156200;XR_260169;XR_260170 MODEL 8814255 protein-coding LOC102009604 laforin NW_004955477 658249 660233 - 102009604 AGCD01055492;AGCD01055493;GBDJ01162178;XM_005402077 XP_005402134 MODEL 8934245 ncrna LOC102020247 uncharacterized LOC102020247 NW_004955484 5704110 5713900 + 102020247 AGCD01058267;AGCD01058268;GBDF01205030;XR_263889 MODEL 8869002 protein-coding LOC102020968 translation initiation factor IF-2-like NW_004955402 2383172 2417577 + 102020968 AGCD01000076;AGCD01000077;AGCD01000078;GBCE01062741;XM_013515082;XR_001234377;XR_001234386;XR_001234393;XR_001234396;XR_001234400;XR_001234406;XR_001234411;XR_001234418;XR_001234419;XR_001234431 XP_013370536 MODEL 9009511 ncrna LOC102008109 uncharacterized LOC102008109 NW_004955419 15542763 15563815 - 102008109 AGCD01020083;GBDF01286433;XR_260633 MODEL 8783869 protein-coding Ddo D-aspartate oxidase ENCODES a protein that exhibits D-aspartate oxidase activity (ortholog); FAD binding (ortholog); INVOLVED IN aspartate metabolic process (ortholog); D-amino acid catabolic process (ortholog); grooming behavior (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Ataxia (ortholog); sexual dysfunction (ortholog); Weight Gain (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) NW_004955411 35142415 35163234 - 102022896 AGCD01012420;GBCQ01014237;XM_005377886;XM_005377887;XM_013510893;XM_013510894 XP_005377943;XP_005377944;XP_013366347;XP_013366348 MODEL 9053410 ncrna LOC102007690 uncharacterized LOC102007690 NW_004955435 16245726 16250388 - 102007690 AGCD01033304;GBDF01049547;XR_261703 MODEL 8970985 protein-coding LOC102017612 collagen alpha-1(X) chain-like NW_004955570 1578957 1598463 + 102017612 AGCD01074819;AGCD01074820;GBCE01055045;XM_005413619;XM_005413620;XM_005413621;XM_005413622;XM_005413623;XM_013509428;XM_013509429;XM_013509430;XM_013509431;XM_013509432;XM_013509433;XR_001232435;XR_001232436 XP_005413676;XP_005413677;XP_005413678;XP_005413679;XP_005413680;XP_013364882;XP_013364883;XP_013364884;XP_013364885;XP_013364886;XP_013364887 MODEL 8859786 protein-coding Egr1 early growth response 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to antibiotic (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN long term potentiation; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); aortic valve stenosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955418 2001509 2005269 - 102026526 AGCD01018737;GBBH01033334;GBBH01033337;XM_005382100 XP_005382157 MODEL 8842099 protein-coding LOC102003757 olfactory receptor 11L1-like NW_004955473 3769632 3770567 + 102003757 AGCD01053938;XM_005401224 XP_005401281 MODEL 8873135 protein-coding Itprip inositol 1,4,5-trisphosphate receptor interacting protein ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN nuclear outer membrane (ortholog) NW_004955485 6335670 6360757 + 102022392 AGCD01058615;AGCD01058616;GBBH01026694;XM_005403774;XM_005403775;XM_005403776;XM_005403777;XM_005403778;XM_005403779;XM_013504062;XM_013504063;XM_013504064;XM_013504065;XM_013504066;XM_013504067;XR_263908 XP_005403831;XP_005403832;XP_005403833;XP_005403834;XP_005403835;XP_005403836;XP_013359516;XP_013359517;XP_013359518;XP_013359519;XP_013359520;XP_013359521 MODEL 9005632 protein-coding Cplx4 complexin 4 ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN regulation of neurotransmitter secretion (ortholog); FOUND IN synapse (ortholog) NW_004955402 43435939 43455704 - 102014513 AGCD01001073;XM_005373002 XP_005373059 MODEL 8999585 protein-coding Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 ENCODES a protein that exhibits (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); 17-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); bile acid biosynthetic process (ortholog); brexanolone metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); azoospermia (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial nucleoid (ortholog); mitochondrial ribonuclease P complex (ortholog) NW_004955475 478690 481029 - 102015007 AGCD01054692;GBCQ01166613;XM_005401494 XP_005401551 MODEL 39131356 protein-coding IL20RB interleukin 20 receptor subunit beta 8734164 protein-coding Csmd2 CUB and Sushi multiple domains 2 INVOLVED IN maintenance of postsynaptic density structure (ortholog); postsynaptic density assembly (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955452 11695182 12274450 - 102009678 AGCD01044343;AGCD01044344;AGCD01044345;AGCD01044346;AGCD01044347;AGCD01044348;AGCD01044349;AGCD01044350;GBDI01214799;XM_005395116;XM_005395117;XM_013519719;XM_013519720;XM_013519721 XP_005395173;XP_005395174;XP_013375173;XP_013375174;XP_013375175 MODEL 8826665 pseudo LOC102015698 ezrin pseudogene NW_004955460 13608269 13609137 - 102015698 AGCD01048706 MODEL 8817270 protein-coding LOC102008841 calcyclin-binding protein-like NW_004955414 6441386 6442088 - 102008841 AGCD01014919;XM_013512070 XP_013367524 MODEL 9011920 protein-coding Brwd3 bromodomain and WD repeat domain containing 3 ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog) NW_004955529 834459 992259 - 102018130 AGCD01069659;AGCD01069660;AGCD01069661;AGCD01069662;AGCD01069663;AGCD01069664;GBDK01342474;XM_005410071 XP_005410128 MODEL 9041564 protein-coding LOC102005577 uncharacterized LOC102005577 NW_004955465 13237704 13244781 + 102005577 AGCD01050593;GBCE01177470;XM_013521808 XP_013377262 MODEL 8904869 protein-coding Kcnh8 potassium voltage-gated channel subfamily H member 8 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); potassium ion transport (ortholog); response to aldosterone (ortholog); ASSOCIATED WITH progressive myoclonus epilepsy 4 (ortholog); retinal degeneration (ortholog); RETINAL DYSTROPHY WITH INNER RETINAL DYSFUNCTION AND GANGLION CELL ABNORMALITIES (ortholog); FOUND IN plasma membrane (ortholog) NW_004955430 11298850 11654835 + 102003572 AGCD01029446;AGCD01029447;AGCD01029448;AGCD01029449;AGCD01029450;AGCD01029451;AGCD01029452;AGCD01029453;AGCD01029454;AGCD01029455;AGCD01029456;XM_005387459 XP_005387516 MODEL 8943106 protein-coding CUNH14orf119 chromosome unknown C14orf119 homolog ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 37203604 37206853 - 102024654 AGCD01010498;GBBH01035248;XM_005377092;XM_013510446 XP_005377149;XP_013365900 MODEL 8916547 protein-coding Ankra2 ankyrin repeat family A member 2 ENCODES a protein that exhibits histone deacetylase binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of protein-containing complex assembly (ortholog); FOUND IN 3M complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955425 27035850 27045253 + 102005820 AGCD01025959;GBDJ01017286;XM_005386069;XM_005386070 XP_005386126;XP_005386127 MODEL 9042608 pseudo LOC102015703 40S ribosomal protein S2 pseudogene NW_004955465 1555464 1557236 + 102015703 AGCD01050340 MODEL 8964142 ncrna LOC102009224 uncharacterized LOC102009224 NW_004955441 12505345 12519740 + 102009224 AGCD01037123;GBDF01308251;XR_262074 MODEL 8861526 ncrna LOC102011516 uncharacterized LOC102011516 NW_004955411 10562211 10565308 + 102011516 AGCD01011781;GBDF01307096;XR_259930 MODEL 8768950 protein-coding LOC102011956 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955456 13079418 13133056 - 102011956 AGCD01046578;GBDK01016339;XM_013520498;XM_013520499;XM_013520500;XM_013520502;XM_013520503;XM_013520504;XM_013520505 XP_013375952;XP_013375953;XP_013375954;XP_013375956;XP_013375957;XP_013375958;XP_013375959 MODEL 39132021 rrna 5S_rRNA 5S ribosomal RNA 8836932 pseudo LOC102015330 bisphosphoglycerate mutase-like NW_004955501 6853024 6853772 + 102015330 AGCD01064202 MODEL 39134316 misc_rna 7SK 7SK RNA 8853318 protein-coding Dpp8 dipeptidyl peptidase 8 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); INVOLVED IN negative regulation of programmed cell death (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955450 9976452 10036652 + 102006410 AGCD01042603;GBDF01122947;XM_005393720 XP_005393777 MODEL 8730603 ncrna LOC102003758 uncharacterized LOC102003758 NW_004955415 5445231 5497596 + 102003758 AGCD01015995;GBDK01101825;XR_260270 MODEL 8872427 protein-coding Cysltr1 cysteinyl leukotriene receptor 1 ENCODES a protein that exhibits leukotriene receptor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH acute asthma (ortholog); Acute Lung Injury (ortholog); allergic asthma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955557 1667518 1702272 - 102022430 AGCD01073303;AGCD01073304;AY462138;GBCE01034656;XM_005412634;XM_005412635 AAR26537;XP_005412691;XP_005412692 MODEL 9055912 ncrna LOC102024466 uncharacterized LOC102024466 NW_004955420 11291287 11311386 - 102024466 AGCD01020801;GBDF01114691;XR_260704 MODEL 8938883 protein-coding Gprin2 G protein regulated inducer of neurite outgrowth 2 NW_004955510 6141516 6155372 + 102014592 AGCD01066302;AGCD01066303;GBCE01107160;XM_005407914;XM_005407915;XM_005407916;XM_005407917;XM_013506342;XM_013506343;XM_013506344 XP_005407971;XP_005407972;XP_005407973;XP_005407974;XP_013361796;XP_013361797;XP_013361798 MODEL 8914901 protein-coding LOC102013854 uncharacterized LOC102013854 NW_004955506 4657596 4686979 + 102013854 AGCD01065342;GBDI01275212;XM_013506140;XR_001231607;XR_001231608;XR_001231609;XR_001231610;XR_001231611;XR_001231612;XR_001231613;XR_001231614;XR_001231615;XR_264353 XP_013361594 MODEL 8764563 pseudo LOC102020569 arylacetamide deacetylase-like 4 pseudogene NW_004955486 790572 791361 + 102020569 AGCD01058889 MODEL 8916944 pseudo LOC102021720 thioredoxin-like NW_004955449 3639955 3645607 - 102021720 AGCD01041858 MODEL 10201666 ncrna LOC106149929 uncharacterized LOC106149929 NW_004955457 12855868 12856884 + 106149929 AGCD01047028;GBCB01050707;XR_001236412 MODEL 9012587 pseudo LOC102013497 programmed cell death protein 5 pseudogene NW_004955414 20055216 20055636 - 102013497 AGCD01015354 MODEL 8891567 ncrna LOC102016099 uncharacterized LOC102016099 NW_004955440 9732822 9743822 - 102016099 AGCD01036384;GBDI01167562;XR_001235269;XR_262012 MODEL 8831055 protein-coding Ifi35 interferon induced protein 35 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN macrophage activation involved in immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Human Influenza (ortholog); Spontaneous Abortions (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955451 16790998 16798993 + 102029254 AGCD01043707;GBBH01032363;XM_005394494 XP_005394551 MODEL 8977355 protein-coding Fbxo42 F-box protein 42 NW_004955527 1967232 2049524 + 102029787 AGCD01069420;AGCD01069421;GBDF01160524;XM_005409838;XM_005409839;XM_005409840;XM_005409841;XM_013507387 XP_005409895;XP_005409896;XP_005409897;XP_005409898;XP_013362841 MODEL 39133744 misc_rna 7SK 7SK RNA 8907091 ncrna LOC102012723 uncharacterized LOC102012723 NW_004955452 3278140 3282430 + 102012723 AGCD01043918;GBDF01194364;XR_262644 MODEL 8899219 ncrna LOC102014604 uncharacterized LOC102014604 NW_004955533 345007 345797 + 102014604 AGCD01070315;GBDI01215215;XR_264737 MODEL 8717162 ncrna LOC102007693 uncharacterized LOC102007693 NW_004955437 532416 541946 + 102007693 AGCD01034142;AGCD01034143;AGCD01034144;GBDJ01142993;XR_261816 MODEL 8826532 protein-coding LOC102008111 UPF0547 protein C16orf87 NW_004955420 26793782 26794800 + 102008111 AGCD01021432;XM_005383473 XP_005383530 MODEL 39134028 misc_rna 7SK 7SK RNA 39132022 rrna 5S_rRNA 5S ribosomal RNA 9031418 protein-coding Egr2 early growth response 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aorta development (ortholog); brain segmentation (ortholog); facial nerve structural organization (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955425 16055748 16068429 - 102023171 AGCD01025594;GBDK01360900;XM_005385956;XM_013514884;XM_013514885 XP_005386013;XP_013370338;XP_013370339 MODEL 8911233 protein-coding Cpm carboxypeptidase M PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH autistic disorder (ortholog); endometriosis (ortholog); silicosis (ortholog) NW_004955458 15296783 15360753 - 102008920 AGCD01047882;AGCD01047883;AGCD01047884;GBDJ01010130;XM_005397485;XM_013520938 XP_005397542;XP_013376392 MODEL 8767907 protein-coding LOC102019219 olfactory receptor 2G2-like NW_004955581 837416 838405 + 102019219 AGCD01075698;XM_005414254 XP_005414311 MODEL 8813585 pseudo LOC102013114 transmembrane protein 54 pseudogene NW_004955435 7874595 7902075 - 102013114 AGCD01032980;AGCD01032981 MODEL 8730281 protein-coding Ciart circadian associated repressor of transcription ENCODES a protein that exhibits E-box binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); locomotor rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) NW_004955413 490117 494332 - 102017111 AGCD01013472;GBDF01020471;XM_005378693;XM_013511464;XM_013511465;XM_013511466 XP_005378750;XP_013366918;XP_013366919;XP_013366920 MODEL 8785654 pseudo LOC102010330 translationally-controlled tumor protein pseudogene NW_004955452 860898 861359 - 102010330 AGCD01043827 MODEL 8955692 ncrna LOC102009605 uncharacterized LOC102009605 NW_004955478 6496663 6507303 + 102009605 AGCD01055896;GBDF01194619;XR_001230836;XR_001230837;XR_001230838;XR_263699 MODEL 8836186 ncrna LOC102011114 uncharacterized LOC102011114 NW_004955416 28362023 28367569 + 102011114 AGCD01017627;GBCQ01114433;XR_001233378;XR_001233379;XR_260430;XR_260431;XR_260433 MODEL 8993496 protein-coding Bscl2 BSCL2 lipid droplet biogenesis associated, seipin ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cytosolic lipolysis (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Asthenozoospermia (ortholog); autosomal dominant distal hereditary motor neuronopathy 13 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955599 505725 514225 + 102011605 AGCD01076654;GBDJ01021043;XM_013510053;XM_013510054;XM_013510055;XM_013510056 XP_013365507;XP_013365508;XP_013365509;XP_013365510 MODEL 8752585 pseudo LOC102016475 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 pseudogene NW_004955416 20842499 20843310 + 102016475 AGCD01017471 MODEL 8983855 protein-coding LOC102008843 olfactory receptor 52N4-like NW_004955414 21721245 21722210 + 102008843 AGCD01015429;XM_005380501 XP_005380558 MODEL 8705061 ncrna LOC102009225 uncharacterized LOC102009225 NW_004955549 375942 379270 + 102009225 AGCD01072423;GBDF01288013;XR_264913 MODEL 8747057 protein-coding LOC102015705 uncharacterized LOC102015705 NW_004955466 1072520 1075515 + 102015705 AGCD01050688;GBDF01250391;XM_005399245 XP_005399302 MODEL 8929684 protein-coding Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ir (ortholog); intellectual disability (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); oligosaccharyltransferase complex (ortholog) NW_004955452 1186733 1195691 - 102020745 AGCD01043835;GBDJ01006766;XM_005394684 XP_005394741 MODEL 8846488 protein-coding LOC102014213 general transcription factor II-I repeat domain-containing protein 2B NW_004955456 13308270 13349556 + 102014213 AGCD01046586;AGCD01046587;GBDF01261563;XM_005396734;XM_005396735;XM_013520535 XP_005396791;XP_005396792;XP_013375989 MODEL 8886449 protein-coding LOC102011519 zinc finger protein with KRAB and SCAN domains 3 NW_004955465 13688307 13696499 + 102011519 AGCD01050618;GBCB01076570;XM_005398966 XP_005399023 MODEL 8921205 protein-coding Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); actin filament organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955406 18435984 18527967 - 102028934 AGCD01006035;AGCD01006036;AGCD01006037;AGCD01006038;AGCD01006039;AGCD01006040;AGCD01006041;AGCD01006042;GBDI01026839;XM_005374945;XM_005374946;XM_005374949;XM_005374950 XP_005375002;XP_005375003;XP_005375006;XP_005375007 MODEL 8799976 protein-coding LOC102017615 zinc finger protein 324A NW_004955584 1087372 1099232 + 102017615 AGCD01075978;AGCD01075979;AGCD01075980;GBBH01102143;XM_005414387 XP_005414444 MODEL 8743600 ncrna LOC102011960 uncharacterized LOC102011960 NW_004955459 5331828 5338432 - 102011960 AGCD01048044;XR_263016 MODEL 9065783 protein-coding Ercc5 ERCC excision repair 5, endonuclease ENCODES a protein that exhibits bubble DNA binding (ortholog); damaged DNA binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN base-excision repair, AP site formation (ortholog); determination of adult lifespan (ortholog); DNA repair (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cerebrooculofacioskeletal syndrome 3 (ortholog); Cockayne syndrome (ortholog); Colorectal Neoplasms (ortholog); FOUND IN DNA replication factor A complex (ortholog); nucleoplasm (ortholog); nucleotide-excision repair complex (ortholog) NW_004955404 8294506 8321505 - 102028608 AGCD01003350;GBDK01132700;XM_005374021 XP_005374078 MODEL 39134319 misc_rna 7SK 7SK RNA 8932474 protein-coding Il20rb interleukin 20 receptor subunit beta ENCODES a protein that exhibits interleukin-20 binding (ortholog); INVOLVED IN homeostasis of number of cells within a tissue (ortholog); immune response-inhibiting signal transduction (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH toxic shock syndrome (ortholog) NW_004955501 1826687 1863261 - 102016401 AGCD01064063;AGCD01064064;GBCC01037652;XM_013505811;XR_001231528 XP_013361265 MODEL 8839041 protein-coding Hsd17b11 hydroxysteroid 17-beta dehydrogenase 11 ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); steroid dehydrogenase activity (ortholog); INVOLVED IN androgen catabolic process (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog) NW_004955474 2477670 2510424 + 102016050 AGCD01054297;GBCE01052669;GBDK01006521;XM_005401337 XP_005401394 MODEL 8917941 protein-coding Enah ENAH actin regulator ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); WW domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actin polymerization or depolymerization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog); filopodium (ortholog); focal adhesion (ortholog) NW_004955520 310482 374800 + 102030115 AGCD01068015;GBDI01069846;XM_013507016 XP_013362470 MODEL 8856656 ncrna LOC102003760 uncharacterized LOC102003760 NW_004955475 4403226 4412590 - 102003760 AGCD01054876;AGCD01054877;GBDK01406757;XR_001230760;XR_001230761;XR_263610 MODEL 8704237 protein-coding Gprin3 GPRIN family member 3 INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); excitatory chemical synaptic transmission (ortholog); locomotory behavior (ortholog) NW_004955405 253917 265309 - 102005103 AGCD01004555;GBDF01115743;XM_013517274 XP_013372728 MODEL 8733083 protein-coding LOC102013855 olfactory receptor 5AK2-like NW_004955511 2146091 2147020 + 102013855 AGCD01066394;XM_005407985 XP_005408042 MODEL 8836712 pseudo LOC102005578 Y+L amino acid transporter 2 pseudogene NW_004955466 2383953 2385889 - 102005578 AGCD01050736 MODEL 8792043 protein-coding Kcnip1 potassium voltage-gated channel interacting protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); potassium channel regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of action potential (ortholog); regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Idiopathic Generalized Epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); dendrite (ortholog) NW_004955408 23299192 23662395 + 102016786 AGCD01008588;AGCD01008589;GBDJ01062789;XM_005376316;XM_005376317;XM_005376318 XP_005376373;XP_005376374;XP_005376375 MODEL 10372034 ncrna LOC106149930 uncharacterized LOC106149930 NW_004955402 5747561 5749079 - 106149930 AGCD01000138;GBDF01196370;XR_001236414 MODEL 39131817 rrna 5S_rRNA 5S ribosomal RNA 8910313 ncrna LOC102007697 uncharacterized LOC102007697 NW_004955438 985521 989683 - 102007697 AGCD01034966;GBDF01049911;XR_001235136 MODEL 8919827 protein-coding Gps1 G protein pathway suppressor 1 INVOLVED IN protein deneddylation (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955506 1105157 1110129 - 102016730 AGCD01065245;GBBH01090750;XM_005407221;XM_005407223;XM_005407224;XM_013506096 XP_005407278;XP_005407280;XP_005407281;XP_013361550 MODEL 8709801 protein-coding LOC102008469 protein FAM209B NW_004955445 2725178 2727984 - 102008469 AGCD01039364;GBDJ01263846;XM_005392264 XP_005392321 MODEL 9065896 pseudo LOC102008112 amyloid beta A4 precursor protein-binding family B member 2-like NW_004955488 9036407 9057644 + 102008112 AGCD01059741;AGCD01059742;AGCD01059743 MODEL 9057106 protein-coding Fbxo43 F-box protein 43 INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of cell cycle process (ortholog); negative regulation of meiotic nuclear division (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 12 (ortholog); spermatogenic failure 64 (ortholog); FOUND IN nucleus (ortholog) NW_004955417 15394481 15406751 - 102014897 AGCD01018231;GBDF01090210;XM_005381862;XM_013512827;XM_013512828;XM_013512829 XP_005381919;XP_013368281;XP_013368282;XP_013368283 MODEL 8954057 protein-coding Csmd3 CUB and Sushi multiple domains 3 INVOLVED IN regulation of dendrite development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hirschsprung's disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955417 19040692 20125790 - 102027071 AGCD01018340;AGCD01018341;AGCD01018342;AGCD01018343;AGCD01018344;AGCD01018345;AGCD01018346;AGCD01018347;AGCD01018348;AGCD01018349;AGCD01018350;AGCD01018351;AGCD01018352;AGCD01018353;AGCD01018354;AGCD01018355;AGCD01018356;AGCD01018357;AGCD01018358;AGCD01018359;AGCD01018360;AGCD01018361;AGCD01018362;AGCD01018363;AGCD01018364;AGCD01018365;AGCD01018366;AGCD01018367;AGCD01018368;GBDF01056629;XM_005381888 XP_005381945 MODEL 8783380 protein-coding Dpp9 dipeptidyl peptidase 9 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of programmed cell death (ortholog); pyroptotic inflammatory response (ortholog); ASSOCIATED WITH idiopathic pulmonary fibrosis (ortholog); Immunodeficiency 111 (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955495 4281262 4313674 + 102005057 AGCD01061910;AGCD01061911;AGCD01061912;GBDI01180667;XM_005405783;XM_005405786;XM_013505184 XP_005405840;XP_005405843;XP_013360638 MODEL 9034067 protein-coding LOC102020573 chromosome unknown open reading frame, human C3orf22 FOUND IN cytoplasm (ortholog) NW_004955421 21945527 21949229 + 102020573 AGCD01022125;GBDF01046381;XM_013513638 XP_013369092 MODEL 8948904 protein-coding LOC102020970 uncharacterized LOC102020970 NW_004955402 60344584 60352660 + 102020970 AGCD01001588;GBCE01063401;XM_013511554;XM_013511564;XM_013511569;XR_259120;XR_259121 XP_013367008;XP_013367018;XP_013367023 MODEL 9040519 protein-coding LOC102020250 cocaine esterase-like NW_004955484 9650749 9665513 - 102020250 AGCD01058424;GBCQ01000107;XM_005403714;XM_013504010;XM_013504011;XM_013504012;XM_013504013;XM_013504014;XM_013504015 XP_005403771;XP_013359464;XP_013359465;XP_013359466;XP_013359467;XP_013359468;XP_013359469 MODEL 8883960 protein-coding LOC102013498 vomeronasal type-1 receptor 90-like NW_004955414 15078937 15087520 + 102013498 AGCD01015176;XM_005380444 XP_005380501 MODEL 8729156 protein-coding LOC102019223 endothelial transcription factor GATA-2 NW_004955402 10652635 10674280 + 102019223 AGCD01000284;AGCD01000285;GBDI01323443;GBDK01085852;XM_013522231 XP_013377685 MODEL 8872959 pseudo LOC102016100 T-complex protein 1 subunit eta pseudogene NW_004955440 5237870 5239148 + 102016100 AGCD01036273 MODEL 8968399 protein-coding LOC102021725 serine protease 52-like NW_004955403 52095441 52106295 - 102021725 AGCD01003001;GBDF01120892;XM_005373801 XP_005373858 MODEL 8850806 protein-coding LOC102013115 vomeronasal type-2 receptor 116-like NW_004955524 3532203 3543838 - 102013115 AGCD01068906;XM_013507197 XP_013362651 MODEL 8780088 protein-coding LOC102013857 olfactory receptor 5T2-like NW_004955511 1051558 1052376 + 102013857 AGCD01066354;XM_013506421 XP_013361875 MODEL 39133745 misc_rna 7SK 7SK RNA 8837479 ncrna LOC102009608 uncharacterized LOC102009608 NW_004955481 940584 941784 - 102009608 AGCD01056818;GBDF01049337;XR_263757 MODEL 8947606 protein-coding Itpripl1 ITPRIP like 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN calcium ion import (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955470 3870296 3873212 + 102016466 AGCD01052712;GBDF01005329;XM_005400657;XM_005400658;XM_013522858 XP_005400714;XP_005400715;XP_013378312 MODEL 8743194 protein-coding Bsdc1 BSD domain containing 1 FOUND IN Golgi apparatus (ortholog) NW_004955452 10694113 10723342 - 102021513 AGCD01044289;AGCD01044290;GBCQ01037702;XM_005395063 XP_005395120 MODEL 8773218 ncrna LOC102015331 uncharacterized LOC102015331 NW_004955427 9210802 9219071 - 102015331 AGCD01027094;GBDF01040198;XR_261246 MODEL 8723480 ncrna LOC102014216 uncharacterized LOC102014216 NW_004955408 22585567 22590646 - 102014216 AGCD01008578;GBDF01208907;XR_001231743 MODEL 39132024 rrna 5S_rRNA 5S ribosomal RNA 8948285 protein-coding Ifih1 interferon induced with helicase C domain 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); defense response to virus (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 7 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955449 11538869 11596502 + 102016765 AGCD01042091;AGCD01042092;GBDK01395379;XM_005393309 XP_005393366 MODEL 8752923 pseudo LOC102009226 40S ribosomal protein S13 pseudogene NW_004955550 1911159 1911637 - 102009226 AGCD01072597 MODEL 9041056 protein-coding LOC102011531 vomeronasal type-1 receptor 90-like NW_004955414 14947178 14948107 - 102011531 AGCD01015163;XM_005380439 XP_005380496 MODEL 39134029 misc_rna 7SK 7SK RNA 9002652 pseudo LOC102024469 E3 ubiquitin-protein ligase RLIM pseudogene NW_004955420 13292515 13293631 + 102024469 AGCD01020919 MODEL 9011989 protein-coding Cysltr2 cysteinyl leukotriene receptor 2 ENCODES a protein that exhibits cysteinyl leukotriene receptor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); negative regulation of glial cell proliferation (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH otitis media; aspirin-induced respiratory disease (ortholog); asthma (ortholog); FOUND IN membrane (ortholog) NW_004955431 2203342 2282635 + 102018629 AGCD01029924;AGCD01029925;AGCD01029926;GBDI01106238;XM_005387568;XM_005387569;XM_013515743 XP_005387625;XP_005387626;XP_013371197 MODEL 8904096 protein-coding CUNH14orf39 chromosome unknown C14orf39 homolog INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic cell cycle (ortholog); meiotic DNA double-strand break processing involved in reciprocal meiotic recombination (ortholog); ASSOCIATED WITH azoospermia (ortholog); primary ovarian insufficiency (ortholog); primary ovarian insufficiency 18 (ortholog); FOUND IN central element (ortholog); chromosome (ortholog) NW_004955466 9158022 9194088 + 102017318 AGCD01051030;GBDF01251571;XM_013521883 XP_013377337 MODEL 8825814 protein-coding Egr3 early growth response 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); ASSOCIATED WITH Ataxia (ortholog); COVID-19 (ortholog) NW_004955403 46105447 46108149 - 102014312 AGCD01002849;GBDF01192293;XM_005373688 XP_005373745 MODEL 8703468 protein-coding Ercc6 ERCC excision repair 6, chromatin remodeling factor ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH age related macular degeneration 5 (ortholog); Agenesis of Corpus Callosum (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955556 745175 812215 + 102029672 AGCD01073179;GBCE01126926;XM_005412569 XP_005412626 MODEL 9019867 pseudo LOC102010333 U1 small nuclear ribonucleoprotein C pseudogene NW_004955453 8264707 8265255 + 102010333 AGCD01044758;XM_005395715 MODEL 8751346 protein-coding Cib1 calcium and integrin binding 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Epidermodysplasia Verruciformis 3 (ortholog); Huntington's disease (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); centrosome (ortholog) NW_004955416 15102632 15106372 + 102022284 AGCD01017300;AGCD01017301;GBDI01005717;XM_005381532 XP_005381589 MODEL 8787190 pseudo LOC102014612 complement C1q-like protein 4 NW_004955547 25035 27971 - 102014612 AGCD01072124 MODEL 39131818 rrna 5S_rRNA 5S ribosomal RNA 8965448 protein-coding LOC102015709 histone acetyltransferase p300-like NW_004955413 26801494 26828627 + 102015709 AGCD01014478;AGCD01014479;AGCD01014480;AGCD01014481;AGCD01014482;GBDF01124584;GBDK01021524;XM_005379340 XP_005379397 MODEL 8853681 protein-coding LOC102016479 histone H4 NW_004955483 808848 811799 - 102016479 AGCD01057632;GBDJ01338008;XM_005403295 XP_005403352 MODEL 8900301 protein-coding Ddr1 discoidin domain receptor tyrosine kinase 1 ENCODES a protein that exhibits collagen binding (ortholog); protein tyrosine kinase collagen receptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); axon development (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcoholic hepatitis (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border (ortholog); plasma membrane (ortholog) NW_004955583 820893 838515 + 102019869 AGCD01075866;AGCD01075867;AGCD01075868;GBCB01060373;XM_005414320;XM_013509826;XM_013509827;XM_013509828;XM_013509829;XM_013509830;XM_013509831;XM_013509832;XM_013509833 XP_005414377;XP_013365280;XP_013365281;XP_013365282;XP_013365283;XP_013365284;XP_013365285;XP_013365286;XP_013365287 MODEL 8800844 protein-coding Gps2 G protein pathway suppressor 2 ENCODES a protein that exhibits cyclin binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of fat cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955467 9600829 9604148 + 102021866 AGCD01051519;GBDI01060015;XM_005399523;XM_005399524;XM_005399525 XP_005399580;XP_005399581;XP_005399582 MODEL 8840530 protein-coding LOC102003764 collagen alpha-1(III) chain-like NW_004955478 11060155 11061599 - 102003764 AGCD01056157;GBCB01001731;XM_005402303 XP_005402360 MODEL 8701837 protein-coding Cpn1 carboxypeptidase N subunit 1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN bradykinin catabolic process (ortholog); protein catabolic process (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH carboxypeptidase N deficiency (ortholog); FOUND IN extracellular space (ortholog) NW_004955507 5926508 5952515 - 102019517 AGCD01065693;GBDK01395401;XM_005407682;XM_013506245 XP_005407739;XP_013361699 MODEL 8993649 protein-coding Fbxo44 F-box protein 44 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955486 2204470 2210604 - 102019397 AGCD01058994;GBCB01060530;GBDI01168344;XM_013504315 XP_013359769 MODEL 8986303 protein-coding Il21 interleukin 21 ENCODES a protein that exhibits cytokine receptor binding (ortholog); interleukin-2 receptor binding (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); allergic disease (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955428 18057096 18065492 + 102014809 AGCD01028056;XM_005386769 XP_005386826 MODEL 9044833 protein-coding Enam enamelin ENCODES a protein that exhibits structural constituent of tooth enamel (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1B (ortholog); amelogenesis imperfecta type 1C (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955447 2331251 2345459 - 102025189 AGCD01040538;JN414625;XM_013518491 AEP18526;XP_013373945 MODEL 9011252 protein-coding Ablim1 actin binding LIM protein 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN axon guidance (ortholog); cilium assembly (ortholog); lamellipodium assembly (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); lamellipodium (ortholog); postsynaptic density (ortholog) NW_004955431 19397136 19684574 - 102017805 AGCD01030448;AGCD01030449;AGCD01030450;AGCD01030451;AGCD01030452;GBCE01077697;XM_005387831;XM_005387832;XM_005387833;XM_005387834;XM_005387836;XM_005387838;XM_013515782;XM_013515783;XM_013515784;XM_013515785;XM_013515786;XM_013515787;XM_013515788;XM_013515789;XM_013515790;XM_013515791 XP_005387888;XP_005387889;XP_005387890;XP_005387891;XP_005387893;XP_005387895;XP_013371236;XP_013371237;XP_013371238;XP_013371239;XP_013371240;XP_013371241;XP_013371242;XP_013371243;XP_013371244;XP_013371245 MODEL 8920404 protein-coding Ankrd1 ankyrin repeat domain 1 ENCODES a protein that exhibits actin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); I band (ortholog) NW_004955425 2258554 2267699 + 102011460 AGCD01025257;GBDI01025686;XM_005385837;XM_005385838 XP_005385894;XP_005385895 MODEL 8878359 protein-coding Hsd17b12 hydroxysteroid 17-beta dehydrogenase 12 ENCODES a protein that exhibits collagen binding (ortholog); fibronectin binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); fatty acid elongation, saturated fatty acid (ortholog); positive regulation of cell-substrate adhesion (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); extracellular matrix (ortholog); fatty acid elongase complex (ortholog) NW_004955422 3721452 3864801 - 102025368 AGCD01022527;AGCD01022528;GBCC01015803;XM_005384084 XP_005384141 MODEL 9057989 protein-coding Ifit1 interferon induced protein with tetratricopeptide repeats 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); RNA binding (ortholog); RNA sequestering activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to type I interferon (ortholog); ASSOCIATED WITH endometriosis (ortholog); Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955425 3581705 3588528 - 102016075 AGCD01025294;GBDJ01403433;XM_005385850 XP_005385907 MODEL 8749257 pseudo LOC102020251 arylacetamide deacetylase-like 4 NW_004955486 740749 753796 - 102020251 AGCD01058878;AGCD01058879;AGCD01058880;AGCD01058881;AGCD01058882 MODEL 8839501 protein-coding Dhrs9 dehydrogenase/reductase 9 ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); androgen metabolic process (ortholog); progesterone metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Birth Weight (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955449 5360486 5380279 - 102030487 AGCD01041929;GBDF01028240;XM_005393265;XM_013518802 XP_005393322;XP_013374256 MODEL 8957477 protein-coding LOC102019224 zinc finger protein 627-like NW_004955599 9018 47613 + 102019224 AGCD01076609;AGCD01076610;AGCD01076611;AGCD01076612;AGCD01076613;AGCD01076614;GBCQ01009278;XM_013510036 XP_013365490 MODEL 8941679 protein-coding Kcnip2 potassium voltage-gated channel interacting protein 2 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN action potential (ortholog); clustering of voltage-gated potassium channels (ortholog); membrane repolarization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); plasma membrane (ortholog) NW_004955485 8468117 8472220 + 102016714 AGCD01058714;AGCD01058715;GBCE01097783;GBDF01003714;XM_013504088 XP_013359542 MODEL 8814445 ncrna LOC102013858 uncharacterized LOC102013858 NW_004955513 4433883 4437916 - 102013858 AGCD01066927;GBDF01088196;XR_264478;XR_264479 MODEL 10146797 ncrna LOC106149931 uncharacterized LOC106149931 NW_004955457 7882946 7885290 + 106149931 AGCD01046891;XR_001236413 MODEL 8817428 protein-coding LOC102017617 uncharacterized LOC102017617 NW_004955402 9150459 9154214 - 102017617 AGCD01000207;GBDF01245775;XM_005373147 XP_005373204 MODEL 39133746 misc_rna 7SK 7SK RNA 9015170 protein-coding LOC102013116 chymotrypsin-like elastase family member 2A NW_004955527 2688070 2701711 - 102013116 AGCD01069463;GBDF01042987;XM_005409873 XP_005409930 MODEL 39134334 misc_rna 7SK 7SK RNA 8725356 protein-coding LOC102009610 dnaJ homolog subfamily C member 25 NW_004955419 15664786 15684889 - 102009610 AGCD01020086;AGCD01020087;GBBH01057437;GBDF01120670;XM_013513302 XP_013368756 MODEL 9035318 ncrna LOC102011962 uncharacterized LOC102011962 NW_004955410 25402864 25406681 - 102011962 AGCD01011152;GBDF01041224;XR_259864 MODEL 8839459 protein-coding Csn1s1 casein alpha s1 FOUND IN extracellular region (ortholog) NW_004955447 2908095 2928444 - 102028036 AGCD01040567;AGCD01040568;GBDF01209795;XM_013518489 XP_013373943 MODEL 39132025 rrna 5S_rRNA 5S ribosomal RNA 8799894 pseudo LOC102011538 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955477 4017638 4038493 + 102011538 AGCD01055577 MODEL 8884247 protein-coding Bsg basigin (Ok blood group) ENCODES a protein that exhibits protein carrier chaperone (ortholog); signaling receptor activity (ortholog); virus receptor activity (ortholog); INVOLVED IN decidualization (ortholog); embryo implantation (ortholog); endothelial tube morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); breast ductal carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); endoplasmic reticulum membrane (ortholog); endosome (ortholog) NW_004955495 7148806 7156296 - 102023491 AGCD01062122;GBCC01008459;XM_005406036;XM_013505312 XP_005406093;XP_013360766 MODEL 8742490 protein-coding Dprx divergent-paired related homeobox ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Dwarfism (ortholog) NW_004955604 370544 376004 - 102022148 AGCD01076895;GBDF01143814;XM_013510088 XP_013365542 MODEL 8935774 pseudo LOC102012724 ras-related protein Rab-5A pseudogene NW_004955404 17557735 17563974 - 102012724 AGCD01003594 MODEL 9014062 pseudo LOC102020579 heat shock cognate 71 kDa protein pseudogene NW_004955423 15738116 15740017 + 102020579 AGCD01023813 MODEL 8963940 protein-coding LOC102005583 apolipoprotein L2-like NW_004955413 22371700 22393689 - 102005583 AGCD01014294;AGCD01014295;AGCD01014296;AGCD01014297;AGCD01014298;AGCD01014299;XM_005379646 XP_005379703 MODEL 8865628 protein-coding LOC102011120 filamin-interacting protein FAM101A ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN actin filament bundle organization (ortholog); negative regulation of bone mineralization involved in bone maturation (ortholog); negative regulation of chondrocyte development (ortholog); FOUND IN actin filament bundle (ortholog) NW_004955482 5034075 5044162 - 102011120 AGCD01057318;GBCE01016386;XM_005403010;XM_005403011;XM_013503639 XP_005403067;XP_005403068;XP_013359093 MODEL 8822051 protein-coding Egr4 early growth response 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog) NW_004955424 12339152 12341925 + 102015739 AGCD01024604;GBDF01288078;XM_005385561 XP_005385618 MODEL 8986621 protein-coding CUNH14orf93 chromosome unknown C14orf93 homolog NW_004955409 37290615 37315297 + 102026405 AGCD01010506;AGCD01010507;GBDI01355317;XM_005377097;XM_005377098 XP_005377154;XP_005377155 MODEL 9027228 ncrna LOC102010334 uncharacterized LOC102010334 NW_004955406 19328963 19363689 - 102010334 AGCD01006077;GBDF01119607;XR_001236563;XR_001236565;XR_001236566;XR_001236567;XR_001236568;XR_001236569 MODEL 8877335 protein-coding LOC102016102 collagen alpha-1(III) chain-like NW_004955441 9860808 9871968 + 102016102 AGCD01037040;GBDI01367168;XM_013517512 XP_013372966 MODEL 8883029 protein-coding Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase ENCODES a protein that exhibits DNA translocase activity (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog) NW_004955475 11596405 11629186 - 102012755 AGCD01055158;AGCD01055159;AGCD01055160;AGCD01055161;AGCD01055162;GBDI01367112;XM_005401684 XP_005401741 MODEL 9020231 ncrna LOC102021734 uncharacterized LOC102021734 NW_004955407 40982526 40988715 + 102021734 AGCD01007854;GBCE01120715;XR_001231377;XR_001231379 MODEL 8779106 pseudo LOC102007698 V-type proton ATPase subunit F pseudogene NW_004955438 4435333 4445285 + 102007698 AGCD01035043;AGCD01035044 MODEL 8856179 ncrna LOC102015334 uncharacterized LOC102015334 NW_004955511 6179748 6184490 - 102015334 AGCD01066598;GBDF01195944;XR_264437 MODEL 8882655 protein-coding Itpripl2 ITPRIP like 2 NW_004955442 2981507 2987633 - 102004980 AGCD01037488;GBCB01099986;GBDI01180684;XM_005391095 XP_005391152 MODEL 39134030 misc_rna 7SK 7SK RNA 8807012 ncrna LOC102024470 uncharacterized LOC102024470 NW_004955421 22223831 22235690 + 102024470 AGCD01022128;GBCB01111021;XR_260814 MODEL 8740452 pseudo LOC102013499 superoxide dismutase [Cu-Zn] pseudogene NW_004955472 2854745 2855177 + 102013499 AGCD01053492 MODEL 8705810 protein-coding Cysrt1 cysteine rich tail 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); establishment of skin barrier (ortholog); FOUND IN cornified envelope (ortholog) NW_004955513 5223124 5224650 + 102010396 AGCD01066963;GBDI01327324;XM_005408604 XP_005408661 MODEL 8711921 protein-coding LOC102008850 centromere protein Q-like NW_004955481 3368425 3369339 + 102008850 AGCD01056902;XM_013503357 XP_013358811 MODEL 8937522 protein-coding Gpsm1 G protein signaling modulator 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); INVOLVED IN negative regulation of GTPase activity (ortholog); negative regulation of guanyl-nucleotide exchange factor activity (ortholog); positive regulation of macroautophagy (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cell cortex (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955513 4363534 4387356 - 102011690 AGCD01066927;GBCE01052148;XM_005408511;XM_005408513;XM_005408516 XP_005408568;XP_005408570;XP_005408573 MODEL 8946980 ncrna LOC102011963 uncharacterized LOC102011963 NW_004955410 30060160 30071952 - 102011963 AGCD01011301;GBDF01192837;XR_259886 MODEL 8841304 protein-coding Enc1 ectodermal-neural cortex 1 INVOLVED IN negative regulation of translation (ortholog); positive regulation of neuron projection development (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955425 26017684 26029262 + 102003987 AGCD01025940;GBDF01251229;XM_005386066 XP_005386123 MODEL 8945768 ncrna LOC102014616 uncharacterized LOC102014616 NW_004955556 2241825 2245100 - 102014616 AGCD01073208;GBCQ01144286;XR_001232318 MODEL 8953366 protein-coding Cpn2 carboxypeptidase N subunit 2 NW_004955420 14416308 14425945 + 102003140 AGCD01020944;AGCD01020945;GBCQ01091013;XM_005383197;XM_005383198 XP_005383254;XP_005383255 MODEL 9000996 protein-coding Dpt dermatopontin ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); INVOLVED IN cell adhesion (ortholog); collagen fibril organization (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); sensorineural hearing loss (ortholog); varicose veins (ortholog) NW_004955462 8451159 8480085 + 102017205 AGCD01049319;GBDJ01003871;XM_005398205 XP_005398262 MODEL 8953515 protein-coding LOC102008473 zinc finger protein OZF-like NW_004955569 1649162 1664829 + 102008473 AGCD01074673;AGCD01074674;GBDJ01263726;XM_013509377 XP_013364831 MODEL 39131819 rrna 5S_rRNA 5S ribosomal RNA 8885517 protein-coding LOC102009229 kallikrein-4-like NW_004955558 1932972 1936783 + 102009229 AGCD01073488;GBDF01079517;XM_005412753 XP_005412810 MODEL 8821803 ncrna LOC102008117 uncharacterized LOC102008117 NW_004955493 654340 655511 - 102008117 AGCD01060859;GBDK01039914;XR_264062 MODEL 10221485 ncrna LOC106149932 uncharacterized LOC106149932 NW_004955458 15456971 15460710 - 106149932 AGCD01047892;GBDI01106016;XR_001236428 MODEL 9019384 ncrna LOC102015713 uncharacterized LOC102015713 NW_004955414 23873136 23879589 - 102015713 AGCD01015527;GBDI01164401;XR_001233159;XR_260193 MODEL 8751816 protein-coding LOC102016481 arylacetamide deacetylase-like 4 NW_004955486 669925 732562 - 102016481 AGCD01058864;AGCD01058865;AGCD01058866;AGCD01058867;AGCD01058868;AGCD01058869;AGCD01058870;AGCD01058871;AGCD01058872;AGCD01058873;AGCD01058874;AGCD01058875;XM_005415332 XP_005415389 MODEL 8710741 ncrna LOC102020972 uncharacterized LOC102020972 NW_004955403 32363451 32367762 - 102020972 AGCD01002433;GBDK01040815;XR_259218 MODEL 8974844 ncrna LOC102017621 uncharacterized LOC102017621 NW_004955451 11658116 11663081 + 102017621 AGCD01043362;GBCE01179796;XR_001235940;XR_262592 MODEL 9020771 pseudo LOC102013121 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955442 17346571 17349515 - 102013121 AGCD01037949 MODEL 9033716 pseudo LOC102007704 soluble lamin-associated protein of 75 kDa pseudogene NW_004955441 15516264 15525569 - 102007704 AGCD01037250 MODEL 9062683 protein-coding Csn2 casein beta ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN lactation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955447 2868899 2889969 + 102027696 AGCD01040567;GBCE01017349;XM_013518473 XP_013373927 MODEL 8726228 ncrna LOC102013501 uncharacterized LOC102013501 NW_004955473 5281173 5291335 + 102013501 AGCD01053974;GBDI01312184;XR_001237117;XR_263581 MODEL 8952241 protein-coding Hsd17b13 hydroxysteroid 17-beta dehydrogenase 13 INVOLVED IN positive regulation of lipid biosynthetic process (ortholog); ASSOCIATED WITH steatotic liver disease (ortholog); FOUND IN lipid droplet (ortholog) NW_004955474 2532213 2554324 + 102016376 AGCD01054298;GBCQ01159342;XM_005401338 XP_005401395 MODEL 8966553 protein-coding Ablim2 actin binding LIM protein family member 2 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN actin cytoskeleton (ortholog); myofibril (ortholog) NW_004955514 2800758 2920926 + 102011353 AGCD01067089;AGCD01067090;GBDJ01123377;XM_005408783;XM_005408784;XM_005408785;XM_005408786;XM_005408787;XM_005408789;XM_013506772;XM_013506773;XM_013506774;XM_013506775;XM_013506776;XM_013506778;XM_013506779;XM_013506780;XM_013506781;XM_013506782;XM_013506783 XP_005408840;XP_005408841;XP_005408842;XP_005408843;XP_005408844;XP_005408846;XP_013362226;XP_013362227;XP_013362228;XP_013362229;XP_013362230;XP_013362232;XP_013362233;XP_013362234;XP_013362235;XP_013362236;XP_013362237 MODEL 8701050 protein-coding Dhrsx dehydrogenase/reductase X-linked ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); dolichal reductase (NADPH) activity (ortholog); polyprenol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN dolichyl monophosphate biosynthetic process (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH Congenital disorder of glycosylation, type 1DD (ortholog); FOUND IN extracellular region (ortholog); lipid droplet (ortholog) NW_004955499 1360636 1471141 - 102010069 AGCD01063348;AGCD01063349;AGCD01063350;AGCD01063351;AGCD01063352;AGCD01063353;AGCD01063354;AGCD01063355;GBCB01024741;GBDF01253653;XM_005406518;XM_013505592 XP_005406575;XP_013361046 MODEL 8781508 pseudo LOC102016106 RWD domain-containing protein 1 pseudogene NW_004955555 1175559 1176286 - 102016106 AGCD01073060 MODEL 8739089 protein-coding LOC102019231 multiple PDZ domain protein-like NW_004955849 9290 12584 + 102019231 AGCD01078489;XM_005415135 XP_005415192 MODEL 8893791 protein-coding LOC102013509 uncharacterized LOC102013509 NW_004955485 6368092 6370491 + 102013509 AGCD01058616;XM_005403920 XP_005403977 MODEL 8886505 protein-coding Ehbp1 EH domain binding protein 1 ASSOCIATED WITH myoepithelioma (ortholog); Prostate Cancer, Hereditary, 12 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955424 21151473 21500044 - 102015647 AGCD01024895;AGCD01024896;AGCD01024897;AGCD01024898;GBDF01043859;XM_005385724;XM_005385725;XM_005385727;XM_005385730;XM_013514691;XM_013514692 XP_005385781;XP_005385782;XP_005385784;XP_005385787;XP_013370145;XP_013370146 MODEL 39133749 misc_rna 7SK 7SK RNA 9062262 protein-coding Kcnip3 potassium voltage-gated channel interacting protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); intracellular protein transport (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; FOUND IN axon (ortholog); axon terminus (ortholog); cytosol (ortholog) NW_004955470 3545434 3613288 + 102012630 AGCD01052703;AGCD01052704;GBDF01144556;XM_005400645;XM_013522855;XM_013522856 XP_005400702;XP_013378309;XP_013378310 MODEL 39134335 misc_rna 7SK 7SK RNA 8817327 pseudo LOC102011539 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial pseudogene NW_004955477 3913414 3916387 - 102011539 AGCD01055577 MODEL 8730162 pseudo LOC102009612 zinc finger matrin-type protein 2 pseudogene NW_004955485 7634595 7636928 - 102009612 AGCD01058668 MODEL 8780711 protein-coding Cib2 calcium and integrin binding family member 2 ENCODES a protein that exhibits calcium ion binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to ATP (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 48 (ortholog); fundus dystrophy (ortholog); FOUND IN cuticular plate (ortholog); cytoplasm (ortholog); muscle tendon junction (ortholog) NW_004955450 660655 674726 - 102006730 AGCD01042341;GBCE01008843;XM_005393438;XM_013518896;XM_013518897 XP_005393495;XP_013374350;XP_013374351 MODEL 9014092 pseudo LOC102024471 10 kDa heat shock protein, mitochondrial-like NW_004955421 4215206 4215943 + 102024471 AGCD01021685 MODEL 9042866 protein-coding LOC102003769 protein NipSnap homolog 3A-like NW_004955419 21692598 21700920 - 102003769 AGCD01020281;GBCB01039739;GBDK01115357;XM_013513175 XP_013368629 MODEL 8775166 ncrna LOC102012730 uncharacterized LOC102012730 NW_004955407 18730128 18738547 + 102012730 AGCD01007275;GBDF01261213;XR_259575 MODEL 8837009 protein-coding LOC102020582 olfactory receptor 7A17-like NW_004955495 8348920 8349873 + 102020582 AGCD01062200;XM_005406178 XP_005406235 MODEL 8955391 ncrna LOC102020252 uncharacterized LOC102020252 NW_004955486 7287493 7296193 + 102020252 AGCD01059128;GBDF01248533;XR_263960 MODEL 8785809 protein-coding LOC102016482 E3 SUMO-protein ligase PIAS2-like NW_004955420 30189775 30195685 + 102016482 AGCD01021538;GBCB01120667;XM_013513632 XP_013369086 MODEL 9063939 protein-coding Ankrd10 ankyrin repeat domain 10 FOUND IN nucleoplasm (ortholog) NW_004955404 1928285 1954193 + 102019014 AGCD01003237;AGCD01003238;GBBH01002947;XM_005373997;XM_013515744;XR_259288 XP_005374054;XP_013371198 MODEL 8763602 pseudo LOC102010338 uncharacterized protein C3orf38 homolog pseudogene NW_004955456 8222073 8223194 - 102010338 AGCD01046462 MODEL 8852282 protein-coding CUNH15orf39 chromosome unknown C15orf39 homolog INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of inflammatory response (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955450 2900456 2905748 - 102003077 AGCD01042411;GBDI01216199;XM_013519039 XP_013374493 MODEL 8772790 protein-coding Cib3 calcium and integrin binding family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog) NW_004955524 1386586 1391419 + 102024608 AGCD01068749;GBDF01059038;XM_005409490 XP_005409547 MODEL 8909475 protein-coding Ddr2 discoidin domain receptor tyrosine kinase 2 ENCODES a protein that exhibits collagen binding (ortholog); protein tyrosine kinase collagen receptor activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to angiotensin (ortholog); ASSOCIATED WITH adenosquamous gallbladder carcinoma (ortholog); alcoholic liver cirrhosis (ortholog); colorectal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955462 13578638 13644834 - 102004790 AGCD01049428;AGCD01049429;AGCD01049430;GBBH01076825;GBDK01239606;XM_013521453 XP_013376907 MODEL 8778209 protein-coding LOC102008851 solute carrier family 7 member 13-like NW_004955417 3044836 3065300 + 102008851 AGCD01017903;XM_013512697 XP_013368151 MODEL 8812095 protein-coding LOC102014618 uncharacterized LOC102014618 NW_004955559 130101 184986 + 102014618 AGCD01073546;AGCD01073547;AGCD01073548;AGCD01073549;AGCD01073550;AGCD01073551;AGCD01073552;AGCD01073553;AGCD01073554;XM_013508941 XP_013364395 MODEL 8921301 ncrna LOC102008122 uncharacterized LOC102008122 NW_004955423 9990855 9994777 + 102008122 AGCD01023668;GBDF01225396;XR_001234046 MODEL 8749631 protein-coding Cpne1 copine 1 ENCODES a protein that exhibits calcium ion binding (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); negative regulation of gene expression (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955422 25793841 25837680 + 102007441 AGCD01023269;GBDI01081464;XM_005384779;XM_005384782;XM_005384783;XM_013514123;XM_013514124;XM_013514125 XP_005384836;XP_005384839;XP_005384840;XP_013369577;XP_013369578;XP_013369579 MODEL 8982880 protein-coding Il21r interleukin 21 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); B-cell lymphoma (ortholog); Behcet's disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955493 5613704 5646692 + 102007025 AGCD01061071;AGCD01061072;GBDI01219894;GBDI01219902;XM_013504819 XP_013360273 MODEL 8972996 protein-coding Bsn bassoon presynaptic cytomatrix protein ENCODES a protein that exhibits dynein light chain binding (ortholog); enzyme inhibitor activity (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN axo-dendritic transport (ortholog); modulation of chemical synaptic transmission (ortholog); presynaptic active zone assembly (ortholog); ASSOCIATED WITH epilepsy (ortholog); heart disease (ortholog); FOUND IN axon (ortholog); axon cytoplasm (ortholog); cell cortex (ortholog) NW_004955532 1527336 1578394 + 102008256 AGCD01070191;AGCD01070192;AGCD01070193;AGCD01070194;GBDF01249114;XM_013507574 XP_013363028 MODEL 8949559 pseudo LOC102020973 ubiquitin-conjugating enzyme E2 N-like NW_004956457 2985 3442 + 102020973 AGCD01079628 MODEL 8963946 ncrna LOC102005587 uncharacterized LOC102005587 NW_004955470 11311958 11314586 - 102005587 AGCD01052885;GBDF01111978;XR_263502 MODEL 9066734 protein-coding Fbxo45 F-box protein 45 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); cerebral cortex radially oriented cell migration (ortholog); cerebral cortex tangential migration (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleoplasm (ortholog); postsynaptic cytosol (ortholog) NW_004955420 12714749 12727600 + 102023811 AGCD01020886;GBBH01138893;GBDF01075808;XM_013513505 XP_013368959 MODEL 8792442 protein-coding LOC102011124 olfactory receptor 2K2 NW_004955419 15925491 15926438 + 102011124 AGCD01020094;XM_013513143 XP_013368597 MODEL 8927603 protein-coding Ifit2 interferon induced protein with tetratricopeptide repeats 2 INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-alpha (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955425 3685626 3692482 - 102016400 AGCD01025295;GBDK01239902;XM_005385851 XP_005385908 MODEL 8873193 protein-coding Itsn1 intersectin 1 ENCODES a protein that exhibits kinase activator activity (ortholog); molecular adaptor activity (ortholog); proline-rich region binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); endocytosis (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN apical dendrite (ortholog); calyx of Held (ortholog); clathrin-coated pit (ortholog) NW_004955407 33056004 33275681 + 102023330 AGCD01007695;AGCD01007696;AGCD01007697;GBDF01046720;XM_005375691;XM_005375693;XM_005375697;XM_013504344;XM_013504347;XM_013504352;XM_013504357;XM_013504361 XP_005375748;XP_005375750;XP_005375754;XP_013359798;XP_013359801;XP_013359806;XP_013359811;XP_013359815 MODEL 8977655 protein-coding LOC102013859 zinc finger protein 709-like NW_004955432 4110745 4145337 - 102013859 AGCD01030693;AGCD01030694;AGCD01030695;AGCD01030696;GBDF01011095;XM_013515924 XP_013371378 MODEL 8724761 pseudo LOC102011964 40S ribosomal protein S3a pseudogene NW_004955410 19855730 19856950 - 102011964 AGCD01011031 MODEL 8867495 protein-coding Gpsm2 G protein signaling modulator 2 ENCODES a protein that exhibits dynein complex binding (ortholog); G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); INVOLVED IN establishment of mitotic spindle orientation (ortholog); maintenance of centrosome location (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 7 (ortholog); Chudley-Mccullough syndrome (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955435 12334462 12387262 + 102020701 AGCD01033144;AGCD01033145;AGCD01033146;AGCD01033147;GBDF01043863;XM_013516518 XP_013371972 MODEL 8999415 protein-coding Endod1 endonuclease domain containing 1 NW_004955412 61280 65352 + 102009816 AGCD01012480;GBDJ01177795;XM_013511207 XP_013366661 MODEL 8912217 ncrna LOC102021735 uncharacterized LOC102021735 NW_004955408 6117602 6136953 + 102021735 AGCD01008164;GBDF01095616;XR_001232266 MODEL 39131820 rrna 5S_rRNA 5S ribosomal RNA 8731549 pseudo LOC102015335 olfactory receptor 10AG1-like NW_004955511 5013534 5016613 - 102015335 AGCD01066542 MODEL 8925870 protein-coding Ablim3 actin binding LIM protein family member 3 INVOLVED IN cilium assembly (ortholog); lamellipodium assembly (ortholog); obsolete positive regulation of protein targeting to mitochondrion (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); stress fiber (ortholog) NW_004955415 5151445 5261300 - 102028410 AGCD01015991;GBCB01041836;XM_005380619;XM_005380622;XM_005380626;XM_013512341;XM_013512342;XM_013512343;XM_013512344 XP_005380676;XP_005380679;XP_005380683;XP_013367795;XP_013367796;XP_013367797;XP_013367798 MODEL 8828732 pseudo LOC102009232 phosphorylated adapter RNA export protein pseudogene NW_004955444 566028 567654 + 102009232 AGCD01038678 MODEL 10249118 ncrna LOC106149933 uncharacterized LOC106149933 NW_004955458 12709287 12721892 - 106149933 AGCD01047788;GBCB01068735;XR_001236429;XR_001236430 MODEL 8783688 ncrna LOC102016108 uncharacterized LOC102016108 NW_004955559 575754 579933 + 102016108 AGCD01073594;GBDF01160759;XR_264996 MODEL 39134031 misc_rna 7SK 7SK RNA 8943167 protein-coding Hsd17b14 hydroxysteroid 17-beta dehydrogenase 14 ENCODES a protein that exhibits D-threo-aldose 1-dehydrogenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN L-fucose catabolic process (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN cytosol (ortholog) NW_004955559 1775889 1784598 + 102003290 AGCD01073666;GBCQ01039526;XM_005412929;XM_013509038 XP_005412986;XP_013364492 MODEL 8836314 protein-coding LOC102013512 olfactory receptor 4C12-like NW_004955422 189260 205015 - 102013512 AGCD01022401;GBDF01234708;XM_005383939 XP_005383996 MODEL 39134336 misc_rna 7SK 7SK RNA 8935846 protein-coding LOC102015714 olfactory receptor 2AT4-like NW_004955414 16679287 16683630 + 102015714 AGCD01015222;XM_005380450 XP_005380507 MODEL 8860274 protein-coding LOC102017623 uncharacterized LOC102017623 NW_004955451 17616484 17619800 + 102017623 AGCD01043763;XM_005394540 XP_005394597 MODEL 8923466 ncrna LOC102014221 uncharacterized LOC102014221 NW_004955463 3968794 3970059 - 102014221 AGCD01049600;GBDF01080280;XR_263143 MODEL 8700554 pseudo LOC102011543 DCN1-like protein 1 pseudogene NW_004955484 8471459 8472600 - 102011543 AGCD01058384 MODEL 8858584 protein-coding Cystm1 cysteine rich transmembrane module containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955418 415703 475796 - 102010694 AGCD01018675;AGCD01018676;GBDI01021426;XM_005382046 XP_005382103 MODEL 8887770 protein-coding Kcnip4 potassium voltage-gated channel interacting protein 4 ENCODES a protein that exhibits calcium ion binding (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955480 2803374 3911081 + 102028296 AGCD01056622;AGCD01056623;AGCD01056624;AGCD01056625;AGCD01056626;AGCD01056627;AGCD01056628;AGCD01056629;AGCD01056630;AGCD01056631;GBDJ01368252;XM_005402468;XM_005402469;XM_005402470;XM_005402471;XM_005402472 XP_005402525;XP_005402526;XP_005402527;XP_005402528;XP_005402529 MODEL 8909233 protein-coding LOC102024472 GTPase IMAP family member 7-like NW_004955491 5229068 5233840 - 102024472 AGCD01060475;AGCD01060476;XM_005404791 XP_005404848 MODEL 8863461 ncrna LOC102020974 uncharacterized LOC102020974 NW_004955452 7825330 7829156 - 102020974 AGCD01044199;AGCD01044200;GBDF01221914;XR_262661 MODEL 8931922 protein-coding Ercc6l2 ERCC excision repair 6 like 2 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); DNA damage response (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); bone marrow disease (ortholog); Bone Marrow Failure Syndrome 2 (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) NW_004955422 22753008 22890339 + 102007243 AGCD01023165;AGCD01023166;AGCD01023167;AGCD01023168;AGCD01023169;AGCD01023170;AGCD01023171;AGCD01023172;GBDJ01044876;XM_005384686;XM_013514250;XM_013514251;XM_013514252 XP_005384743;XP_013369704;XP_013369705;XP_013369706 MODEL 9008290 protein-coding Dpy19l1 dpy-19 like C-mannosyltransferase 1 ENCODES a protein that exhibits mannosyltransferase activity (ortholog); INVOLVED IN protein C-linked glycosylation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955560 895807 997538 + 102025185 AGCD01073744;GBDK01357317;XM_013509069 XP_013364523 MODEL 8886346 ncrna LOC102008474 uncharacterized LOC102008474 NW_004955446 117396 131699 - 102008474 AGCD01039928;AGCD01039929;XR_262359 MODEL 8787773 ncrna LOC102010339 uncharacterized LOC102010339 NW_004955408 5326384 5328418 + 102010339 AGCD01008132;GBDF01177225;XR_259661 MODEL 8749247 protein-coding LOC102019232 doublesex- and mab-3-related transcription factor C1-like NW_004956354 942 4659 + 102019232 AGCD01079474;GBDF01153143;XM_005415198 XP_005415255 MODEL 39133750 misc_rna 7SK 7SK RNA 8990641 protein-coding Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 ENCODES a protein that exhibits 2-oxoadipate dehydrogenase activity (ortholog); INVOLVED IN generation of precursor metabolites and energy (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH 2-aminoadipic 2-oxoadipic aciduria (ortholog); Charcot-Marie-Tooth disease axonal type 2Q (ortholog); Charcot-Marie-Tooth Disease Type 2A2 (ortholog); FOUND IN mitochondrion (ortholog); oxoadipate dehydrogenase complex (ortholog) NW_004955462 103501 163472 + 102004909 AGCD01049069;AGCD01049070;AGCD01049071;GBBH01075996;XM_005398075;XM_013521370 XP_005398132;XP_013376824 MODEL 39131821 rrna 5S_rRNA 5S ribosomal RNA 8765516 pseudo LOC102007705 tumor suppressor p53-binding protein 1-like NW_004955548 2402607 2409082 + 102007705 AGCD01072395 MODEL 8899185 pseudo LOC102013124 U2 small nuclear ribonucleoprotein B'' pseudogene NW_004955446 10921532 10922206 + 102013124 AGCD01040192 MODEL 8960023 ncrna LOC102016110 uncharacterized LOC102016110 NW_004955443 16354739 16374514 - 102016110 AGCD01038567;GBDF01236537;XR_262210 MODEL 8876132 protein-coding Il22 interleukin 22 INVOLVED IN response to glucocorticoid (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); asthma (ortholog); autoimmune hepatitis (ortholog); FOUND IN extracellular space (ortholog) NW_004955458 14747339 14755602 - 102029269 AGCD01047846;GBDF01277454;XM_005397469;XM_013520847;XM_013520848 XP_005397526;XP_013376301;XP_013376302 MODEL 9035524 pseudo LOC102020254 cytochrome c oxidase subunit 7C, mitochondrial pseudogene NW_004955489 2304498 2305186 + 102020254 AGCD01059864;XM_005404523 MODEL 39132026 rrna 5S_rRNA 5S ribosomal RNA 8910506 gene LOC102012734 Ig lambda-2 chain V region-like NW_004955455 6800743 6801214 + 102012734 AGCD01045813 MODEL 8842155 protein-coding CUNH15orf40 chromosome unknown C15orf40 homolog FOUND IN mitochondrion (ortholog) NW_004955416 13669931 13681991 + 102004067 AGCD01017231;AGCD01017232;GBDF01162166;XM_005381467;XM_013512496;XM_013512497 XP_005381524;XP_013367950;XP_013367951 MODEL 8805324 pseudo LOC102021737 eukaryotic initiation factor 4A-I-like NW_004955408 16045127 16045682 + 102021737 AGCD01008432 MODEL 8793056 protein-coding Ankrd11 ankyrin repeat domain containing 11 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN bone development (ortholog); cardiac neural crest cell differentiation involved in heart development (ortholog); cell migration (ortholog); ASSOCIATED WITH astigmatism (ortholog); autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955541 2921230 3033612 - 102008570 AGCD01071433;GBCB01040226;GBDF01157743;XM_005411033 XP_005411090 MODEL 9041059 protein-coding Kcnj1 potassium inwardly rectifying channel subfamily J member 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to magnesium ion (ortholog); circulatory system development (ortholog); gene expression (ortholog); ASSOCIATED WITH Bartter disease (ortholog); Bartter disease type 2 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955412 29801022 29832153 - 102013270 AGCD01013286;GBCQ01012015;XM_005378534;XM_005378536;XM_005378537;XM_005378538;XM_005378539;XM_005378540;XM_005378541;XM_013511264;XM_013511265 XP_005378591;XP_005378593;XP_005378594;XP_005378595;XP_005378596;XP_005378597;XP_005378598;XP_013366718;XP_013366719 MODEL 8774162 protein-coding Endog endonuclease G ENCODES a protein that exhibits DNA endonuclease activity (ortholog); DNA nuclease activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog); perikaryon (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955570 1200461 1203566 + 102025406 AGCD01074798;AGCD01074799;GBBH01228917;XM_005413641 XP_005413698 MODEL 9011139 protein-coding LOC102014622 leukocyte immunoglobulin-like receptor subfamily B member 5 NW_004955567 1881010 1900891 - 102014622 AGCD01074497;GBBH01206827;XM_005413394;XM_013509318;XM_013509320;XM_013509321;XM_013509322;XM_013509323;XM_013509324;XM_013509325 XP_005413451;XP_013364772;XP_013364774;XP_013364775;XP_013364776;XP_013364777;XP_013364778;XP_013364779 MODEL 9009426 protein-coding Ereg epiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH cholesteatoma (ortholog); erythropoietic protoporphyria (ortholog); Experimental Colitis (ortholog); FOUND IN extracellular space (ortholog) NW_004955474 612440 627606 + 102006571 AGCD01054224;GBCC01052167;XM_005401312 XP_005401369 MODEL 8734927 pseudo LOC102008477 40S ribosomal protein S24 pseudogene NW_004955447 14840245 14840673 - 102008477 AGCD01041022 MODEL 8802157 protein-coding LOC102013514 vomeronasal type-1 receptor 4-like NW_004955494 8280036 8280923 + 102013514 AGCD01061582;XM_005405545 XP_005405602 MODEL 9012219 protein-coding Abr ABR activator of RhoGEF and GTPase ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); brain development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955481 2503309 2710667 - 102027641 AGCD01056876;AGCD01056877;AGCD01056878;AGCD01056879;GBCE01117779;GBDJ01075590;XM_005402643 XP_005402700 MODEL 8753405 pseudo LOC102008123 protein S100-A10 pseudogene NW_004955495 7868008 7869132 - 102008123 AGCD01062169 MODEL 39134032 misc_rna 7SK 7SK RNA 8956721 pseudo LOC102017625 uncharacterized protein C11orf57 pseudogene NW_004955405 9393595 9394462 - 102017625 AGCD01004772 MODEL 8843085 protein-coding LOC102011127 zinc finger protein 852 NW_004955420 26958234 26960564 + 102011127 AGCD01021441;XM_013513349 XP_013368803 MODEL 8768922 protein-coding LOC102005588 olfactory receptor 51L1-like NW_004955414 21113707 21117034 - 102005588 AGCD01015407;XM_005380493 XP_005380550 MODEL 8822158 protein-coding Bsnd barttin CLCNK type accessory subunit beta ENCODES a protein that exhibits chloride channel activity (ortholog); chloride channel regulator activity (ortholog); INVOLVED IN chloride transport (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Bartter disease (ortholog); Bartter disease type 4A (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955464 4459686 4468749 - 102023448 AGCD01049991;GBCQ01002696;XM_013521764 XP_013377218 MODEL 8913371 ncrna LOC102011553 uncharacterized LOC102011553 NW_004955421 24665699 24694762 - 102011553 AGCD01022221;GBDF01076912;XR_260823 MODEL 8993599 protein-coding Ifit3 interferon induced protein with tetratricopeptide repeats 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-beta (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congestive heart failure (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955425 3671303 3692478 - 102016726 AGCD01025295;XM_013514858 XP_013370312 MODEL 8723365 pseudo LOC102011967 serine-rich single-pass membrane protein 1-like NW_004955411 5417085 5417628 - 102011967 AGCD01011638 MODEL 8705988 ncrna LOC102013862 uncharacterized LOC102013862 NW_004955435 22115074 22120032 + 102013862 AGCD01033491;GBDF01153273;XR_001234904 MODEL 8803660 protein-coding LOC102016486 eukaryotic translation initiation factor 3 subunit C NW_004955493 6664693 6679942 - 102016486 AGCD01061126;AGCD01061127;GBDI01017539;XM_005405168 XP_005405225 MODEL 8708958 protein-coding CYTB cytochrome b MT 14163 15302 + 15822234 JX312692 AFQ55789;YP_008080757 REVIEWED 8785429 protein-coding Abra actin binding Rho activating protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); myofibril (ortholog); plasma membrane (ortholog) NW_004955417 29874234 29883648 - 102025358 AGCD01018611;GBDI01356628;XM_005381954 XP_005382011 MODEL 8708333 ncrna LOC102008854 uncharacterized LOC102008854 NW_004955418 25551560 25572621 - 102008854 AGCD01019367;GBDF01180351;XR_260584 MODEL 8792921 protein-coding Ehbp1l1 EH domain binding protein 1 like 1 INVOLVED IN cell morphogenesis (ortholog); enucleation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH Hydrops Fetalis (ortholog) NW_004955422 19670778 19689008 - 102005388 AGCD01023026;AGCD01023027;GBCB01006443;GBDI01078671;XM_005384477;XM_005384478;XM_005384479;XM_005384480;XM_005384481;XM_005384482;XM_005384483;XM_013513864;XM_013513865;XM_013513866;XM_013513867 XP_005384534;XP_005384535;XP_005384536;XP_005384537;XP_005384538;XP_005384539;XP_005384540;XP_013369318;XP_013369319;XP_013369320;XP_013369321 MODEL 8960241 protein-coding Ddrgk1 DDRGK domain containing 1 ENCODES a protein that exhibits ubiquitin-like protein ligase binding (ortholog); UFM1-modified protein reader activity (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH genetic disease (ortholog); Spondyloepimetaphyseal Dysplasia, Shohat Type (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955415 14085404 14098220 - 102024453 AGCD01016284;AGCD01016285;GBCB01023181;XM_005380785 XP_005380842 MODEL 8753042 protein-coding Cib4 calcium and integrin binding family member 4 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN spermatogenesis (ortholog) NW_004955469 8604866 8669890 - 102015188 AGCD01052476;AGCD01052477;AGCD01052478;GBDF01156204;XM_005400438 XP_005400495 MODEL 8805843 protein-coding LOC102015337 zinc finger protein 709-like NW_004955432 4507438 4533970 + 102015337 AGCD01030723;AGCD01030724;AGCD01030725;GBCE01123757;XM_013515927;XM_013515928 XP_013371381;XP_013371382 MODEL 8994964 ncrna LOC102010340 uncharacterized LOC102010340 NW_004955457 12942492 12966671 + 102010340 AGCD01047033;GBBH01124502;XR_262946 MODEL 8793972 protein-coding LOC102009615 translation initiation factor IF-2-like NW_004955420 29366247 29393153 - 102009615 AGCD01021498;AGCD01021499;GBBH01125290;XM_013513409;XR_001233708 XP_013368863 MODEL 39134337 misc_rna 7SK 7SK RNA 8869025 protein-coding Cpne2 copine 2 INVOLVED IN cellular response to calcium ion (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955433 14766247 14808916 + 102021791 AGCD01031728;AGCD01031729;GBBH01093238;GBDF01188029;XM_005388373 XP_005388430 MODEL 9063362 protein-coding LOC102020585 melanoma-associated antigen 10-like NW_004955498 3052573 3053343 + 102020585 AGCD01062864;XM_005406475 XP_005406532 MODEL 9001349 pseudo LOC102003773 60S ribosomal protein L27a pseudogene NW_004955491 6023903 6024578 + 102003773 AGCD01060512 MODEL 8853225 ncrna LOC102007708 uncharacterized LOC102007708 NW_004955443 5130686 5141731 - 102007708 AGCD01038232;GBCB01015177;XR_262176 MODEL 8782144 protein-coding Kcnj10 potassium inwardly rectifying channel subfamily J member 10 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cellular response to potassium ion (ortholog); central nervous system myelination (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); amyotrophic lateral sclerosis (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte projection (ortholog); basolateral plasma membrane (ortholog) NW_004955468 11828525 11860365 - 102012626 AGCD01052139;GBBH01193401;XM_005400189 XP_005400246 MODEL 8977026 protein-coding LOC102015716 scavenger receptor cysteine-rich domain-containing protein SCART1-like NW_004955477 11165644 11181951 + 102015716 AGCD01055718;AGCD01055719;GBDI01371050;XM_013503025 XP_013358479 MODEL 8792510 protein-coding Fbxo46 F-box protein 46 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) NW_004955574 177374 191720 - 102018542 AGCD01075090;GBCB01111264;XM_005413803;XM_005413804;XM_005413805;XM_005413806;XM_005413807;XM_005413808;XM_013509515 XP_005413860;XP_005413861;XP_005413862;XP_005413863;XP_005413864;XP_005413865;XP_013364969 MODEL 8814478 ncrna LOC102016112 uncharacterized LOC102016112 NW_004955445 5830503 5848709 + 102016112 AGCD01039475;GBDJ01405649;XR_001235600 MODEL 8750881 protein-coding Dpy19l3 dpy-19 like C-mannosyltransferase 3 ENCODES a protein that exhibits mannosyltransferase activity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955468 5466094 5544956 - 102003748 AGCD01051971;AGCD01051972;GBDF01116910;XM_005400090;XM_013522543;XM_013522544 XP_005400147;XP_013377997;XP_013377998 MODEL 8837215 protein-coding Csn3 casein kappa INVOLVED IN lactation (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN extracellular space (ortholog) NW_004955447 2616337 2623845 - 102026813 AGCD01040548;GBDJ01241159;XM_013518493 XP_013373947 MODEL 8950715 protein-coding LOC102009234 prolactin-like NW_004955576 435369 491017 + 102009234 AGCD01075276;AGCD01075277;AGCD01075278;AGCD01075279;AGCD01075280;AGCD01075281;AGCD01075282;AGCD01075283;XM_005413946 XP_005414003 MODEL 8943753 pseudo LOC102019234 trifunctional purine biosynthetic protein adenosine-3 pseudogene NW_004955403 4274146 4277480 - 102019234 AGCD01001784 MODEL 39133751 misc_rna 7SK 7SK RNA 8757509 pseudo LOC102014222 pre-mRNA-splicing factor SLU7-like NW_004955410 4406190 4432857 + 102014222 AGCD01010666 MODEL 8887566 protein-coding Dhx15 DEAH-box helicase 15 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); defense response to bacterium (ortholog); defense response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); epilepsy (ortholog); FOUND IN nuclear speck (ortholog); U12-type spliceosomal complex (ortholog); U2-type post-mRNA release spliceosomal complex (ortholog) NW_004955480 451126 502226 + 102026110 AGCD01056582;GBCQ01039272;XM_005402461 XP_005402518 MODEL 9033454 protein-coding Hsd17b2 hydroxysteroid 17-beta dehydrogenase 2 ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); testosterone dehydrogenase (NAD+) activity (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); androgen metabolic process (ortholog); bone development (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; testosterone biosynthetic pathway; ASSOCIATED WITH Endometrial Neoplasms (ortholog); endometriosis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955564 1884235 1984182 - 102025186 AGCD01074242;AGCD01074243;AGCD01074244;AGCD01074245;AGCD01074246;AGCD01074247;AGCD01074248;AGCD01074249;AGCD01074250;GBDF01025022;XM_005413241;XM_005413242;XM_013509198 XP_005413298;XP_005413299;XP_013364652 MODEL 8929571 protein-coding Endou endonuclease, poly(U) specific ENCODES a protein that exhibits RNA binding (ortholog); RNA endonuclease activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN female pregnancy (ortholog); negative regulation of lipid catabolic process (ortholog); post-transcriptional gene silencing (ortholog); FOUND IN cytoplasm (ortholog) NW_004955500 6631749 6653457 - 102017475 AGCD01063888;AGCD01063889;GBDI01340378;XM_005406609;XM_013505657;XM_013505658;XM_013505660 XP_005406666;XP_013361111;XP_013361112;XP_013361114 MODEL 8791165 protein-coding LOC102013125 olfactory receptor 12D3 NW_004955576 1441105 1442064 - 102013125 AGCD01075376;XM_005413957 XP_005414014 MODEL 8983248 ncrna LOC102020975 uncharacterized LOC102020975 NW_004955452 10681857 10682499 - 102020975 AGCD01044287;GBDF01148858;XR_001236048 MODEL 9058279 protein-coding Itsn2 intersectin 2 INVOLVED IN cell-cell signaling (ortholog); endocytosis (ortholog); positive regulation of dendrite extension (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Landau-Kleffner syndrome (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog) NW_004955469 6358131 6493956 - 102027397 AGCD01052386;AGCD01052387;AGCD01052388;AGCD01052389;AGCD01052390;GBDI01125250;XM_005400386;XM_013522611;XM_013522612 XP_005400443;XP_013378065;XP_013378066 MODEL 39132028 rrna 5S_rRNA 5S ribosomal RNA 8721704 ncrna LOC102005589 uncharacterized LOC102005589 NW_004955415 23433810 23434272 + 102005589 AGCD01016554;GBDF01207363;XR_260313 MODEL 8834490 protein-coding LOC102011130 chromosome unknown open reading frame, human C20orf173 NW_004955422 25895181 25897125 + 102011130 AGCD01023269;AGCD01023270;GBDF01017778;XM_005384792 XP_005384849 MODEL 8822605 pseudo LOC102012739 olfactory receptor 6C74-like NW_004955458 2426969 2427904 - 102012739 AGCD01047233 MODEL 8830632 protein-coding Kcnj11 potassium inwardly rectifying channel subfamily J member 11 ENCODES a protein that exhibits ankyrin binding (ortholog); ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); apoptotic process (ortholog); CAMKK-AMPK signaling cascade (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; altered insulin secretion pathway; ASSOCIATED WITH atopic dermatitis (ortholog); Congenital Hyperinsulinism (ortholog); Developmental Delay, Epilepsy, and Neonatal Diabetes (ortholog); FOUND IN acrosomal vesicle (ortholog); axolemma (ortholog); cell body fiber (ortholog) NW_004955414 32209426 32212424 - 102010147 AGCD01015777;GBCB01005982;XM_005380384 XP_005380441 MODEL 8781071 protein-coding CUNH15orf61 chromosome unknown C15orf61 homolog FOUND IN mitochondrion (ortholog) NW_004955450 8473239 8480571 - 102024744 AGCD01042566;GBBH01006691;XM_005393689 XP_005393746 MODEL 8995846 protein-coding LOC102016489 olfactory receptor 7A17-like NW_004955495 8483137 8484102 - 102016489 AGCD01062212;XM_005406109 XP_005406166 MODEL 8804191 protein-coding LOC102014623 vomeronasal type-1 receptor 4-like NW_004955569 860899 863798 + 102014623 AGCD01074622;XM_005413512 XP_005413569 MODEL 8960870 protein-coding LOC102021740 olfactory receptor 49-like NW_004955409 37585637 37645425 - 102021740 AGCD01010530;AGCD01010531;AGCD01010532;AGCD01010533;XM_005377184 XP_005377241 MODEL 8811883 ncrna LOC102005590 uncharacterized LOC102005590 NW_004955479 2051181 2061238 - 102005590 AGCD01056261;GBDF01038985;XR_001230885;XR_001230886 MODEL 9050498 protein-coding Abracl ABRA C-terminal like NW_004955436 20634128 20645609 - 102013756 AGCD01034032;AGCD01034033;AGCD01034034;GBBH01207589;XM_005389264 XP_005389321 MODEL 8906792 protein-coding Ehd1 EH domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH Disease Progression (ortholog); high grade glioma (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN ciliary pocket membrane (ortholog); ciliary transition zone (ortholog); cilium (ortholog) NW_004955422 20302409 20324591 + 102027079 AGCD01023074;GBCQ01035903;XM_005384552 XP_005384609 MODEL 8969212 protein-coding Ddt D-dopachrome tautomerase ENCODES a protein that exhibits cytokine receptor binding (ortholog); D-dopachrome decarboxylase activity (ortholog); phenylpyruvate tautomerase activity (ortholog); INVOLVED IN negative regulation of macrophage chemotaxis (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of inflammatory response (ortholog); FOUND IN extracellular space (ortholog) NW_004955455 10479409 10481080 - 102004038 AGCD01045956;GBDF01000134;XM_005396485 XP_005396542 MODEL 8826937 protein-coding Ankrd12 ankyrin repeat domain 12 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955402 2705252 2799682 - 102025636 AGCD01000088;AGCD01000089;AGCD01000090;GBBH01165639;XM_005372604;XM_005372606;XM_013515845;XM_013515902 XP_005372661;XP_005372663;XP_013371299;XP_013371356 MODEL 8934089 protein-coding LOC102013519 probable N-acetyltransferase CML1 NW_004955424 12047830 12049545 + 102013519 AGCD01024593;GBCQ01036376;XM_005385553 XP_005385610 MODEL 8795497 ncrna LOC102009616 uncharacterized LOC102009616 NW_004955487 8301569 8308007 + 102009616 AGCD01059433;GBDF01280847;XR_263987 MODEL 8838681 protein-coding Erf ETS2 repressor factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chorio-allantoic fusion (ortholog); ectodermal cell differentiation (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Arnold-Chiari Malformation (ortholog); brain disease (ortholog); CHITAYAT SYNDROME (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955555 654945 661097 + 102027684 AGCD01073042;GBBH01090836;GBCE01095401;XM_005412381;XM_005412382;XM_013508752 XP_005412438;XP_005412439;XP_013364206 MODEL 8954927 protein-coding LOC102024473 chromosome unknown open reading frame, human C11orf96 ASSOCIATED WITH intellectual disability (ortholog) NW_004955422 3639798 3641449 - 102024473 AGCD01022525;AGCD01022526;GBCQ01062880;GBDJ01000004;XM_005384081 XP_005384138 MODEL 8901070 protein-coding Il22ra1 interleukin 22 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-20 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH Rhinosinusitis (ortholog) NW_004955452 3975597 3992809 - 102025865 AGCD01043962;GBDJ01315187;XM_005394795 XP_005394852 MODEL 8708630 ncrna LOC102017628 uncharacterized LOC102017628 NW_004955454 3267669 3273574 - 102017628 AGCD01045061;GBDF01144321;XR_262778 MODEL 8910558 protein-coding Gpsm3 G protein signaling modulator 3 INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of leukocyte chemotaxis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 654475 656335 - 102016634 AGCD01034153;GBDJ01190051;XM_005389440 XP_005389497 MODEL 9001094 protein-coding LOC102020586 regenerating islet-derived protein 3-gamma-like NW_004955424 7406415 7408798 - 102020586 AGCD01024435;XM_005385804 XP_005385861 MODEL 8887315 protein-coding LOC102020260 malignant T-cell-amplified sequence 1-like NW_004955422 29383965 29386096 - 102020260 AGCD01023393;GBCE01028271;XM_005384907 XP_005384964 MODEL 10097631 ncrna LOC106149934 uncharacterized LOC106149934 NW_004955458 12690350 12694313 - 106149934 AGCD01047788;XR_001236431 MODEL 8830697 protein-coding Bsph1 binder of sperm protein homolog 1 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN sperm capacitation (ortholog); FOUND IN cell surface (ortholog) NW_004955609 261937 266866 + 102013675 AGCD01077055;XM_005414937 XP_005414994 MODEL 8738993 protein-coding Ifit5 interferon induced protein with tetratricopeptide repeats 5 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); poly(U) RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of viral genome replication (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN actin cytoskeleton (ortholog); apical part of cell (ortholog); IkappaB kinase complex (ortholog) NW_004955425 3569448 3575043 - 102015970 AGCD01025292;GBDF01065309;XM_013514766 XP_013370220 MODEL 8737230 protein-coding LOC102011555 probable inactive serine protease 58 NW_004955494 1266343 1273436 + 102011555 AGCD01061393;GBDF01081972;XM_005405395;XM_013504926 XP_005405452;XP_013360380 MODEL 39131823 rrna 5S_rRNA 5S ribosomal RNA 8710505 pseudo LOC102008855 S-formylglutathione hydrolase pseudogene NW_004955483 8647789 8648240 - 102008855 AGCD01057841 MODEL 8820927 protein-coding Cyth1 cytohesin 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955506 3920803 3997012 + 102005281 AGCD01065321;AGCD01065322;AGCD01065323;AGCD01065324;GBBH01209744;XM_005407370;XM_013506064;XM_013506065 XP_005407427;XP_013361518;XP_013361519 MODEL 8766503 protein-coding Fbxo47 F-box protein 47 NW_004955451 13939786 13967049 - 102018459 AGCD01043514;AGCD01043515;AGCD01043516;AGCD01043517;AGCD01043518;GBDF01157498;XM_013519121 XP_013374575 MODEL 8783901 protein-coding Csnk1a1 casein kinase 1 alpha 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); peptide binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to nutrient (ortholog); Golgi organization (ortholog); PARTICIPATES IN dopamine signaling pathway; Hedgehog signaling pathway; p53 signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN beta-catenin destruction complex (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955415 4921356 4966705 + 102023026 AGCD01015989;GBDF01000195;XM_005380602;XM_005380603;XM_005380604;XM_013512278;XM_013512279 XP_005380659;XP_005380660;XP_005380661;XP_013367732;XP_013367733 MODEL 8967392 protein-coding LOC102008482 hornerin NW_004955589 190459 199095 + 102008482 AGCD01076158;AGCD01076159;GBCC01001512;XM_005414528;XM_005414529;XM_005414531;XM_013509953;XM_013509954 XP_005414585;XP_005414586;XP_005414588;XP_013365407;XP_013365408 MODEL 9010276 pseudo LOC102008128 transcription initiation factor TFIID subunit 9-like NW_004955427 1717479 1718907 + 102008128 AGCD01026879 MODEL 8797137 protein-coding Endov endonuclease V ENCODES a protein that exhibits DNA binding (ortholog); DNA endonuclease activity, producing 5'-phosphomonoesters (ortholog); magnesium ion binding (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleolus (ortholog) NW_004955506 2483409 2495484 - 102023504 AGCD01065296;GBCE01094306;XM_013506016;XM_013506017 XP_013361470;XP_013361471 MODEL 8885644 pseudo LOC102011971 60S ribosomal protein L3 pseudogene NW_004955468 5498734 5501315 - 102011971 AGCD01051971;XR_263421 MODEL 9050349 protein-coding Hsd17b3 hydroxysteroid 17-beta dehydrogenase 3 ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); testosterone dehydrogenase (NAD+) activity (ortholog); testosterone dehydrogenase (NADP+) activity (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); cellular response to antibiotic (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; testosterone biosynthetic pathway; ASSOCIATED WITH 17-beta hydroxysteroid dehydrogenase 3 deficiency (ortholog); Alzheimer's disease (ortholog); disorder of sexual development (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955422 23104752 23251250 - 102007784 AGCD01023177;AGCD01023178;AGCD01023179;AGCD01023180;AGCD01023181;AGCD01023182;AGCD01023183;AGCD01023184;AGCD01023185;GBDF01190051;XM_005384688;XM_005384689 XP_005384745;XP_005384746 MODEL 8975534 ncrna LOC102015720 uncharacterized LOC102015720 NW_004955481 4043077 4053360 - 102015720 AGCD01056930;AGCD01056931;GBDF01016521;XR_263776 MODEL 8747663 ncrna LOC102013863 uncharacterized LOC102013863 NW_004955533 211564 218477 + 102013863 AGCD01070312;GBDK01343357;XR_264736 MODEL 8823160 protein-coding Dhx16 DEAH-box helicase 16 ENCODES a protein that exhibits molecular adaptor activity (ortholog); pattern recognition receptor activity (ortholog); ubiquitin binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955583 657425 668390 - 102004765 AGCD01075846;AGCD01075847;GBBH01061492;GBCB01038131;XM_013509799 XP_013365253 MODEL 9034718 ncrna LOC102016113 uncharacterized LOC102016113 NW_004955445 10661247 10664768 + 102016113 AGCD01039677;GBDF01049922;XR_001235557;XR_001235558 MODEL 39133752 misc_rna 7SK 7SK RNA 8865022 protein-coding LOC102015341 vomeronasal type-2 receptor 116-like NW_004955524 4084903 4216382 + 102015341 AGCD01068946;AGCD01068947;AGCD01068948;AGCD01068949;AGCD01068950;AGCD01068951;AGCD01068952;AGCD01068953;AGCD01068954;AGCD01068955;AGCD01068956;AGCD01068957;AGCD01068958;AGCD01068959;XM_013507204 XP_013362658 MODEL 39134338 misc_rna 7SK 7SK RNA 8860742 protein-coding LOC102010344 tubulin alpha-3 chain NW_004955461 6060418 6069340 - 102010344 AGCD01048891;GBDK01010972;XM_005398006 XP_005398063 MODEL 9000649 ncrna LOC102003774 uncharacterized LOC102003774 NW_004955422 13750163 13762795 - 102003774 AGCD01022838;GBCB01073765;XR_001233882;XR_001233883;XR_260871;XR_260872 MODEL 8799840 pseudo LOC102007711 26S protease regulatory subunit 10B pseudogene NW_004955444 11911103 11912271 + 102007711 AGCD01039057 MODEL 8983867 pseudo LOC102009624 nuclear receptor-binding factor 2 pseudogene NW_004955495 3092379 3093300 + 102009624 AGCD01061822 MODEL 8966608 protein-coding Ddx1 DEAD-box helicase 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA/RNA helicase activity (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN double-strand break repair (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of myeloid dendritic cell cytokine production (ortholog); ASSOCIATED WITH endometrial hyperplasia (ortholog); human immunodeficiency virus infectious disease (ortholog); substance-related disorder (ortholog); FOUND IN cleavage body (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955487 9085950 9117599 + 102012333 AGCD01059450;AGCD01059451;GBDF01005751;XM_005404443 XP_005404500 MODEL 39132029 rrna 5S_rRNA 5S ribosomal RNA 8917558 protein-coding Erfe erythroferrone ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of autophagy (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955542 2408504 2415522 - 102016097 AGCD01071522;GBDF01279710;XM_013508015;XM_013508016 XP_013363469;XP_013363470 MODEL 8789854 ncrna LOC102011132 uncharacterized LOC102011132 NW_004955424 5106865 5118485 + 102011132 AGCD01024384;GBDF01016619;XR_261042 MODEL 8834866 protein-coding Ivd isovaleryl-CoA dehydrogenase ENCODES a protein that exhibits 3-methylbutanoyl-CoA dehydrogenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955416 7327557 7341533 + 102019911 AGCD01016973;AGCD01016974;GBDF01193059;XM_005381234 XP_005381291 MODEL 8842380 protein-coding Gpt glutamic--pyruvic transaminase INVOLVED IN cellular response to insulin stimulus (ortholog); positive regulation of gluconeogenesis (ortholog); response to nutrient levels (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; alanine metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Bone Fractures (ortholog); FOUND IN extracellular space (ortholog) NW_004955454 3127997 3132459 + 102009143 AGCD01045057;GBDK01138966;XM_005395897 XP_005395954 MODEL 8712175 protein-coding Cibar1 CBY1 interacting BAR domain containing 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cilium assembly (ortholog); inner mitochondrial membrane organization (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH ciliopathy (ortholog); polydactyly (ortholog); Postaxial Polydactyly, Type A1 (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955417 10060500 10080119 + 102018928 AGCD01018065;GBDF01009145;XM_005381785 XP_005381842 MODEL 10136071 ncrna LOC106149935 uncharacterized LOC106149935 NW_004955458 12708341 12709134 - 106149935 AGCD01047788;GBDF01013092;XR_001236432 MODEL 8941820 ncrna LOC102019237 uncharacterized LOC102019237 NW_004955405 40081412 40101110 - 102019237 AGCD01005504;GBDF01173603;XR_259450 MODEL 8872556 protein-coding CUNH15orf62 chromosome unknown C15orf62 homolog ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955416 7621794 7624837 + 102027846 AGCD01016995;GBDK01321324;XM_005381264 XP_005381321 MODEL 39131824 rrna 5S_rRNA 5S ribosomal RNA 39134033 misc_rna 7SK 7SK RNA 9063648 ncrna LOC102008856 uncharacterized LOC102008856 NW_004955484 4129624 4136398 + 102008856 AGCD01058202;GBDF01220583;XR_001231058;XR_001231059;XR_001231060;XR_001231061;XR_263884 MODEL 8984121 protein-coding Kcnj12 potassium inwardly rectifying channel subfamily J member 12 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN potassium ion transport (ortholog); protein homotetramerization (ortholog); PARTICIPATES IN neuron-to-neuron signaling pathway via the chemical synapse; ASSOCIATED WITH Disease Progression (ortholog); Lymphatic Metastasis (ortholog); urinary bladder cancer (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); neuronal cell body (ortholog) NW_004955577 1348350 1359300 + 102024066 AGCD01075448;GBDI01357774;XM_005413992;XM_005413993;XM_013509641 XP_005414049;XP_005414050;XP_013365095 MODEL 8737323 ncrna LOC102014625 uncharacterized LOC102014625 NW_004955447 6468009 6488280 - 102014625 AGCD01040792;GBDF01016625;XR_262411 MODEL 8911408 ncrna LOC102016118 uncharacterized LOC102016118 NW_004955450 15980124 15994008 + 102016118 AGCD01042826;GBDJ01165643;XR_001235902;XR_001235903 MODEL 8707537 protein-coding Bspry B-box and SPRY domain containing INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955419 14124167 14139181 - 102027074 AGCD01020012;GBCE01170004;GBDI01012219;XM_013513135 XP_013368589 MODEL 8749769 protein-coding Ifitm10 interferon induced transmembrane protein 10 NW_004955422 13556968 13572010 - 102013624 AGCD01022835;GBCE01165385;XM_013514315;XM_013514316 XP_013369769;XP_013369770 MODEL 8929914 protein-coding Cpne3 copine 3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to growth factor stimulus (ortholog); ERBB2 signaling pathway (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955417 4115298 4146878 + 102007338 AGCD01017938;AGCD01017939;GBBH01140987;GBCQ01094625;XM_013512811 XP_013368265 MODEL 9009387 protein-coding LOC102005594 olfactory receptor 1L6-like NW_004955419 5236631 5237566 - 102005594 AGCD01019793;XM_005382523 XP_005382580 MODEL 8997946 protein-coding Cyth2 cytohesin 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN endosome organization (ortholog); negative regulation of dendrite development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN bicellular tight junction (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955559 2014740 2021234 - 102010101 AGCD01073686;GBDF01002920;XM_013509039;XM_013509040 XP_013364493;XP_013364494 MODEL 8728966 pseudo LOC102010348 zinc finger CCHC domain-containing protein 8-like NW_004955411 3492784 3499691 - 102010348 AGCD01011553 MODEL 8818004 ncrna LOC102013520 uncharacterized LOC102013520 NW_004955500 5962838 5972280 + 102013520 AGCD01063865;GBDF01213566;XR_264230 MODEL 39134034 misc_rna 7SK 7SK RNA 8893826 protein-coding Ankrd13a ankyrin repeat domain 13A ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of protein localization to endosome (ortholog); negative regulation of receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); late endosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955455 8576406 8610878 - 102014417 AGCD01045903;GBDK01182644;XM_005396429;XM_005396430 XP_005396486;XP_005396487 MODEL 8913704 protein-coding LOC102024476 melanoma-associated antigen 10-like NW_004955498 4679377 4680138 + 102024476 AGCD01063015;XM_005406485 XP_005406542 MODEL 8740035 protein-coding LOC102014632 olfactory receptor 2AJ1-like NW_004955619 133994 145476 - 102014632 AGCD01077341;AGCD01077342;AGCD01077343;XM_005415007 XP_005415064 MODEL 8786505 pseudo LOC102017630 phosphatidylinositol 5-phosphate 4-kinase type-2 alpha pseudogene NW_004955406 10315071 10316248 - 102017630 AGCD01005855 MODEL 8768436 protein-coding Dpy19l4 dpy-19 like 4 NW_004955417 10900678 10961878 + 102013718 AGCD01018107;AGCD01018108;AGCD01018109;AGCD01018110;AGCD01018111;GBDF01005727;GBDF01005737;XM_013512758 XP_013368212 MODEL 8828031 protein-coding LOC102009235 signal recognition particle 19 kDa protein NW_004955449 1420800 1421601 - 102009235 AGCD01041800;XM_005393194 XP_005393251 MODEL 9019383 pseudo LOC102013866 ribosome maturation protein SBDS pseudogene NW_004955537 879385 880788 - 102013866 AGCD01070879 MODEL 9028873 protein-coding LOC102012740 interferon-inducible GTPase 1-like NW_004955408 2198852 2276939 - 102012740 AGCD01007998;AGCD01007999;AGCD01008000;AGCD01008001;AGCD01008002;AGCD01008003;GBDK01009851;XM_005376044;XM_013508115 XP_005376101;XP_013363569 MODEL 8981777 protein-coding LOC102014224 serotriflin-like NW_004955411 8272227 8279483 + 102014224 AGCD01011722;AGCD01011723;AGCD01011724;GBBH01225617;XM_005377929 XP_005377986 MODEL 8985509 pseudo LOC102013131 caldesmon pseudogene NW_004955450 10594679 10597747 - 102013131 AGCD01042627 MODEL 8865990 ncrna LOC102021742 uncharacterized LOC102021742 NW_004955410 19646329 19650590 + 102021742 AGCD01011025;AGCD01011026;GBDF01304716;XR_001232689;XR_001232690;XR_001232691;XR_001232692 MODEL 9043964 protein-coding Dhx29 DExH-box helicase 29 ENCODES a protein that exhibits ribonucleoside triphosphate phosphatase activity (ortholog); ribosomal small subunit binding (ortholog); translation activator activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); ribosome assembly (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosolic small ribosomal subunit (ortholog); eukaryotic 43S preinitiation complex (ortholog) NW_004955446 12362324 12412814 + 102017176 AGCD01040230;GBDF01189845;XM_005392696;XM_005392697 XP_005392753;XP_005392754 MODEL 8874220 protein-coding Erfl ETS repressor factor like NW_004955555 929984 941311 + 102008465 AGCD01073053;AGCD01073054;GBCE01120286;XM_005412413;XM_013508718 XP_005412470;XP_013364172 MODEL 8716371 ncrna LOC102019238 uncharacterized LOC102019238 NW_004955453 3959312 3961658 - 102019238 AGCD01044670;GBDJ01054424;XR_262710 MODEL 39134339 misc_rna 7SK 7SK RNA 8756990 protein-coding LOC102020978 uncharacterized protein C7orf62-like NW_004955406 38081928 38084150 - 102020978 AGCD01006589;GBDF01053230;XM_005375199 XP_005375256 MODEL 8737531 protein-coding LOC102008486 vomeronasal type-1 receptor 4-like NW_004955603 3670 4617 + 102008486 AGCD01076801;XM_005414840 XP_005414897 MODEL 8702540 protein-coding Il22ra2 interleukin 22 receptor subunit alpha 2 ENCODES a protein that exhibits interleukin-22 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); regulation of tyrosine phosphorylation of STAT protein (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog) NW_004955436 22208267 22219667 + 102019953 AGCD01034087;XM_005389281 XP_005389338 MODEL 8837617 ncrna LOC102020589 uncharacterized LOC102020589 NW_004955427 12073985 12091655 + 102020589 AGCD01027201;AGCD01027202;AGCD01027203;GBDF01275452;XR_261255 MODEL 8808390 protein-coding LOC102020261 uncharacterized LOC102020261 NW_004955423 1597231 1611521 - 102020261 AGCD01023443;GBDF01176402;XM_005385350 XP_005385407 MODEL 9059246 pseudo LOC102008130 40S ribosomal protein S15a pseudogene NW_004955428 3708701 3774517 + 102008130 AGCD01027660;AGCD01027661 MODEL 9058793 protein-coding Fbxo48 F-box protein 48 NW_004955424 16449166 16455034 + 102020815 AGCD01024741;GBDI01279808;XM_005385663;XM_013514733;XM_013514734;XM_013514735;XM_013514736;XM_013514737 XP_005385720;XP_013370187;XP_013370188;XP_013370189;XP_013370190;XP_013370191 MODEL 8787400 protein-coding Eng endoglin ENCODES a protein that exhibits BMP binding (ortholog); coreceptor activity (ortholog); galactose binding (ortholog); INVOLVED IN angiogenesis (ortholog); artery morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); arteriovenous malformation (ortholog); arteriovenous malformations of the brain (ortholog); FOUND IN cell surface (ortholog); endothelial microparticle (ortholog); external side of plasma membrane (ortholog) NW_004955419 818797 853319 + 102025796 AGCD01019613;AGCD01019614;AGCD01019615;AGCD01019616;AGCD01019617;GBCQ01003907;XM_013513164;XM_013513165;XM_013513166;XM_013513167 XP_013368618;XP_013368619;XP_013368620;XP_013368621 MODEL 8705181 ncrna LOC102016496 uncharacterized LOC102016496 NW_004955426 22212445 22224220 - 102016496 AGCD01026613;AGCD01026614;GBDF01006654;XR_261217 MODEL 8789342 ncrna LOC102015721 uncharacterized LOC102015721 NW_004955481 10034469 10041461 + 102015721 AGCD01057135;GBBH01033155;XR_001230930 MODEL 8986337 protein-coding LOC102016119 protocadherin alpha-C2 NW_004955611 153360 357143 - 102016119 AGCD01077147;AGCD01077148;AGCD01077149;AGCD01077150;AGCD01077151;AGCD01077152;AGCD01077153;AGCD01077154;AGCD01077155;AGCD01077156;AGCD01077157;AGCD01077158;AGCD01077159;AGCD01077160;AGCD01077161;AGCD01077162;AGCD01077163;AGCD01077164;GBCQ01014927;XM_005414941;XM_005414943;XM_005414945 XP_005414998;XP_005415000;XP_005415002 MODEL 8943443 protein-coding Cyth3 cytohesin 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); Golgi vesicle transport (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955460 13439634 13492767 + 102023121 AGCD01048688;AGCD01048689;AGCD01048690;AGCD01048691;GBDF01181556;XM_013521212 XP_013376666 MODEL 8943747 pseudo LOC102014634 elongation factor 1-alpha 1-like NW_004955403 43295733 43315915 - 102014634 AGCD01002768 MODEL 8817832 protein-coding Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 ENCODES a protein that exhibits (3R)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); 17-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH COVID-19 (ortholog); D-bifunctional protein deficiency (ortholog); genetic disease (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955408 39041028 39136867 + 102004246 AGCD01009059;AGCD01009060;AGCD01009061;AGCD01009062;AGCD01009063;GBDF01162423;XM_005376550 XP_005376607 MODEL 8870296 protein-coding Ddx10 DEAD-box helicase 10 INVOLVED IN anterior head development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog) NW_004955412 10747642 11008039 + 102007871 AGCD01012785;AGCD01012786;AGCD01012787;GBDI01262879;XM_005378043 XP_005378100 MODEL 39133753 misc_rna 7SK 7SK RNA 8753866 protein-coding Abraxas1 abraxas 1, BRCA1 A complex subunit ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN double-strand break repair (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of DNA repair (ortholog); ASSOCIATED WITH breast cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN BRCA1-A complex (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955474 6252321 6265518 + 102003759 AGCD01054464;AGCD01054465;AGCD01054466;GBDF01127847;GBDK01359129;XM_013502752 XP_013358206 MODEL 8792474 protein-coding Cibar2 CBY1 interacting BAR domain containing 2 ASSOCIATED WITH Crohn's disease (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955541 478437 486171 - 102016748 AGCD01071352;GBDK01011302;XM_005410971;XM_013507964 XP_005411028;XP_013363418 MODEL 39131825 rrna 5S_rRNA 5S ribosomal RNA 9037736 ncrna LOC102015345 uncharacterized LOC102015345 NW_004955533 468505 485203 - 102015345 AGCD01070319;GBDF01051497;XR_001232031;XR_001232032 MODEL 8785749 protein-coding Csnk1d casein kinase 1 delta ENCODES a protein that exhibits kinase activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); circadian regulation of gene expression (ortholog); Golgi organization (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; ribosome biogenesis pathway; ASSOCIATED WITH advanced sleep phase syndrome 1 (ortholog); advanced sleep phase syndrome 2 (ortholog); Alzheimer's disease (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955506 904659 936293 + 102013853 AGCD01065240;AGCD01065241;GBDF01002630;XM_005407211;XM_005407212;XR_264318 XP_005407268;XP_005407269 MODEL 8752988 protein-coding LOC102013134 ataxin-2-like protein NW_004955451 14872121 14877579 - 102013134 AGCD01043579;AGCD01043580;GBCQ01028990;XM_005394359;XM_013519323;XM_013519324;XM_013519325 XP_005394416;XP_013374777;XP_013374778;XP_013374779 MODEL 9013067 protein-coding Cyth4 cytohesin 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 23745797 23774397 + 102030173 AGCD01014335;GBCE01075881;XM_005379197 XP_005379254 MODEL 9036121 ncrna LOC102013522 uncharacterized LOC102013522 NW_004955426 6475719 6492062 - 102013522 AGCD01026157;GBDF01145587;XR_261192 MODEL 8860920 pseudo LOC102017634 matrin-3 pseudogene NW_004955408 32748713 32750084 + 102017634 AGCD01008854 MODEL 8734119 protein-coding Il23a interleukin 23 subunit alpha ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-23 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); defense response to Gram-negative bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Amebic Liver Abscess (ortholog); Animal Toxoplasmosis (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog); interleukin-23 complex (ortholog); plasma membrane (ortholog) NW_004955458 3946964 3949180 + 102008189 AGCD01047355;GBDF01073810;XM_005397309 XP_005397366 MODEL 8840654 pseudo LOC102008132 40S ribosomal protein S15 pseudogene NW_004955429 10102174 10102807 + 102008132 AGCD01028666 MODEL 8795351 protein-coding LOC102003778 cationic trypsin-3-like NW_004955494 1217574 1223680 + 102003778 AGCD01061392;XM_013504918 XP_013360372 MODEL 8945232 pseudo LOC102016497 ras-related protein Rab-22A pseudogene NW_004955503 8216257 8217105 + 102016497 AGCD01064812 MODEL 8778741 protein-coding Engase endo-beta-N-acetylglucosaminidase ENCODES a protein that exhibits mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity (ortholog); INVOLVED IN protein deglycosylation (ortholog) NW_004955506 3647302 3658676 - 102025928 AGCD01065318;GBDJ01312297;XM_005407343;XM_013506115 XP_005407400;XP_013361569 MODEL 8860859 ncrna LOC102014225 uncharacterized LOC102014225 NW_004955465 9702260 9741251 - 102014225 AGCD01050495;GBDK01058628;XR_001236719;XR_263262 MODEL 8941061 protein-coding CUNH16orf74 chromosome unknown C16orf74 homolog NW_004955541 824381 843420 - 102019432 AGCD01071361;GBCE01181560;GBDJ01336195;XM_005410980 XP_005411037 MODEL 8780735 protein-coding LOC102007712 basic proline-rich protein-like NW_004955445 2689893 2693822 - 102007712 AGCD01039361;GBDF01211368;XM_005392263;XR_001235561;XR_262297 XP_005392320 MODEL 8858964 protein-coding Ifitm5 interferon induced transmembrane protein 5 INVOLVED IN bone mineralization (ortholog); bone morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteogenesis imperfecta (ortholog); osteogenesis imperfecta type 5 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955476 11745585 11747006 + 102027177 AGCD01055474;GBCE01007175;XM_005401877 XP_005401934 MODEL 9014004 pseudo LOC102009626 U6 snRNA-associated Sm-like protein LSm6 pseudogene NW_004955423 13610988 13611230 + 102009626 AGCD01023749 MODEL 8737599 protein-coding LOC102011975 olfactory receptor 52B2-like NW_004955414 21918896 21919849 - 102011975 AGCD01015437;XM_005380105 XP_005380162 MODEL 9045150 protein-coding Cpne4 copine 4 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) NW_004955501 6473669 6941617 + 102008125 AGCD01064194;AGCD01064195;AGCD01064196;AGCD01064197;AGCD01064198;AGCD01064199;AGCD01064200;AGCD01064201;AGCD01064202;GBCQ01032387;XM_005406839;XM_013505812 XP_005406896;XP_013361266 MODEL 8709888 ncrna LOC102010349 uncharacterized LOC102010349 NW_004955465 9065822 9075222 + 102010349 AGCD01050484;GBDK01032471;XR_001236720;XR_263253 MODEL 8760632 protein-coding LOC102019240 quinone oxidoreductase-like protein 2 NW_004955406 17523170 17559805 - 102019240 AGCD01006011;AGCD01006012;GBCQ01041000;XM_005374910;XM_013521021 XP_005374967;XP_013376475 MODEL 39134035 misc_rna 7SK 7SK RNA 9000228 protein-coding LOC102015346 uncharacterized LOC102015346 NW_004955534 1116230 1117449 - 102015346 AGCD01070487;GBDF01063886;XM_013507701 XP_013363155 MODEL 8786017 pseudo LOC102024477 serine/threonine-protein kinase Nek2 pseudogene NW_004955424 14868186 14869112 + 102024477 AGCD01024661 MODEL 8908957 ncrna LOC102011133 uncharacterized LOC102011133 NW_004955496 4331938 4345273 + 102011133 AGCD01062320;GBDF01074903;XR_264176 MODEL 8789859 protein-coding Ivl involucrin INVOLVED IN keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); regulation of antibacterial peptide production (ortholog); ASSOCIATED WITH Skin Neoplasms (ortholog); squamous cell carcinoma (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955592 522730 525728 - 102012043 AGCD01076317;GBCQ01139611;XM_005414617;XM_013509985 XP_005414674;XP_013365439 MODEL 10238320 ncrna LOC106149936 uncharacterized LOC106149936 NW_004955458 13881726 13893278 + 106149936 AGCD01047815;GBDF01247795;XR_001236433;XR_001236434 MODEL 8833157 protein-coding Ehd2 EH domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); endocytic recycling (ortholog); endocytosis (ortholog); FOUND IN caveola (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955574 1490877 1503651 + 102014187 AGCD01075183;GBDJ01021130;XM_005413883 XP_005413940 MODEL 9056350 protein-coding Gpt2 glutamic--pyruvic transaminase 2 ENCODES a protein that exhibits L-alanine:2-oxoglutarate aminotransferase activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); cellular response to insulin stimulus (ortholog); gluconeogenesis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Chronic Hepatitis C (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); mitochondrion (ortholog) NW_004955474 8248622 8285449 - 102012189 AGCD01054547;AGCD01054548;GBBH01062376;GBDI01074545;XM_013502769 XP_013358223 MODEL 8723968 pseudo LOC102008864 solute carrier family 25 member 36-like NW_004955421 22468586 22469764 + 102008864 AGCD01022136 MODEL 8940320 protein-coding Bst1 bone marrow stromal cell antigen 1 ENCODES a protein that exhibits NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); regulation of actin cytoskeleton organization (ortholog); regulation of calcium-mediated signaling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, cyclic ribosylation; niacin metabolic pathway; ASSOCIATED WITH lung disease (ortholog); Parkinson's disease (ortholog); FOUND IN plasma membrane (ortholog); uropod (ortholog) NW_004955480 8273887 8304127 - 102015953 AGCD01056717;AGCD01056718;GBDJ01403584;XM_005402522 XP_005402579 MODEL 8922337 ncrna LOC102021744 uncharacterized LOC102021744 NW_004955466 3543674 3550573 + 102021744 AGCD01050796;GBDF01211120;XR_263286;XR_263287 MODEL 8769524 pseudo LOC102005595 26S proteasome non-ATPase regulatory subunit 8 pseudogene NW_004955419 11675117 11798906 - 102005595 AGCD01019960;AGCD01019961 MODEL 8832452 protein-coding Il23r interleukin 23 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-12 receptor binding (ortholog); interleukin-23 binding (ortholog); INVOLVED IN interleukin-23-mediated signaling pathway (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of defense response to virus by host (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); arthritis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); interleukin-23 receptor complex (ortholog); plasma membrane (ortholog) NW_004955423 23841342 23885191 - 102016288 AGCD01024020;AGCD01024021;GBBH01099037;XM_005385277 XP_005385334 MODEL 39134340 misc_rna 7SK 7SK RNA 39132030 rrna 5S_rRNA 5S ribosomal RNA 8981912 protein-coding Erg ETS transcription factor ERG ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); leukemia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 37372471 37613674 - 102019363 AGCD01007780;AGCD01007781;AGCD01007782;AGCD01007783;AGCD01007784;AGCD01007785;GBDK01013561;XM_005375759;XM_005375760;XM_005375761;XM_013504784 XP_005375816;XP_005375817;XP_005375818;XP_013360238 MODEL 8822820 pseudo LOC102020592 S-methyl-5'-thioadenosine phosphorylase pseudogene NW_004955506 689688 693004 + 102020592 AGCD01065234 MODEL 8717181 protein-coding LOC102008487 actin cytoskeleton-regulatory complex protein pan1-like NW_004955451 2446558 2456251 - 102008487 AGCD01043009;GBBH01184630;XM_013519305 XP_013374759 MODEL 8808056 protein-coding Ankrd13b ankyrin repeat domain 13B ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); late endosome (ortholog) NW_004955481 3644332 3662375 - 102009498 AGCD01056909;AGCD01056910;GBBH01223904;GBDJ01273703;XM_005402675 XP_005402732 MODEL 8997537 protein-coding Dpy30 dpy-30 histone methyltransferase complex regulatory subunit ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endosomal transport (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN Golgi apparatus (ortholog); histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog) NW_004955441 440047 450906 - 102020958 AGCD01036706;GBDI01076579;XM_005390835 XP_005390892 MODEL 39134036 misc_rna 7SK 7SK RNA 8974796 protein-coding LOC102013867 nucleosome assembly protein 1-like 4 NW_004955538 1376841 1381873 - 102013867 AGCD01071056;XM_013507820 XP_013363274 MODEL 8850861 ncrna LOC102016120 uncharacterized LOC102016120 NW_004955403 31397939 31408658 + 102016120 AGCD01002416;AGCD01002417;GBCB01074998;XR_001233593;XR_001233594 MODEL 8877318 ncrna LOC102014639 uncharacterized LOC102014639 NW_004955405 34490007 34505882 - 102014639 AGCD01005375;GBDJ01146546;XR_259430 MODEL 9019461 protein-coding LOC102017635 olfactory receptor 6C3-like NW_004955458 2547175 2548122 - 102017635 AGCD01047237;XM_005397495 XP_005397552 MODEL 8938207 protein-coding Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 ENCODES a protein that exhibits 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); 5-alpha-androstane-3-beta,17-beta-diol dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); brain development (ortholog); cell differentiation (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) NW_004955462 13555488 13574506 - 102011416 AGCD01049428;GBDI01065449;XM_005398268 XP_005398325 MODEL 9001603 protein-coding Kcnj13 potassium inwardly rectifying channel subfamily J member 13 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH Leber congenital amaurosis 16 (ortholog); snowflake vitreoretinal degeneration (ortholog); FOUND IN plasma membrane (ortholog) NW_004955453 3259924 3269394 + 102013246 AGCD01044654;GBDF01168433;XM_005395364;XM_013519903 XP_005395421;XP_013375357 MODEL 9011591 protein-coding Ddx11 DEAD/H-box helicase 11 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent activity, acting on RNA (ortholog); INVOLVED IN cellular response to bleomycin (ortholog); cellular response to cisplatin (ortholog); cellular response to hydroxyurea (ortholog); ASSOCIATED WITH Chromosome Breakage (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); midbody (ortholog) NW_004955524 1932988 1957231 + 102004000 AGCD01068787;GBDF01123175;GBDF01123187;XM_013507302;XM_013507303 XP_013362756;XP_013362757 MODEL 8842945 protein-coding Abraxas2 abraxas 2, BRISC complex subunit ENCODES a protein that exhibits microtubule binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); cellular response to freezing (ortholog); chromosome segregation (ortholog); FOUND IN BRISC complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955477 2782604 2811452 + 102005706 AGCD01055533;GBDF01277348;XM_005401983 XP_005402040 MODEL 8778320 pseudo LOC102011560 uncharacterized protein C8orf59 homolog NW_004955500 5318759 5319643 - 102011560 AGCD01063830 MODEL 9039668 protein-coding Dhx30 DExH-box helicase 30 ENCODES a protein that exhibits chromatin binding (ortholog); double-stranded RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN central nervous system development (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) NW_004955420 24537608 24549771 - 102012330 AGCD01021315;GBCE01115003;GBCQ01129787;XM_013513378 XP_013368832 MODEL 8731101 protein-coding LOC102020979 lymphocyte antigen 6E-like NW_004955454 1484779 1491942 - 102020979 AGCD01044970;XM_005396102 XP_005396159 MODEL 8766008 protein-coding Cic capicua transcriptional repressor ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN brain development (ortholog); learning (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog) NW_004955555 613549 641587 - 102025847 AGCD01073039;AGCD01073040;GBCE01135171;XM_013508684;XM_013508685 XP_013364138;XP_013364139 MODEL 9013369 protein-coding LOC102013135 upstream-binding factor 1-like protein 1 NW_004958190 17 1019 - 102013135 AGCD01081586;GBDF01014529;GBDF01014530;XM_005415239 XP_005415296 MODEL 8982540 pseudo LOC102016499 serine/threonine/tyrosine-interacting protein pseudogene NW_004955427 8873238 8884585 + 102016499 AGCD01027080 MODEL 8726903 protein-coding LOC102020262 olfactory receptor 10T2-like NW_004955495 8104546 8109731 + 102020262 AGCD01062183;AGCD01062184;XM_013505150 XP_013360604 MODEL 8935282 ncrna LOC102009239 uncharacterized LOC102009239 NW_004955586 997656 1002493 + 102009239 AGCD01076049;GBDJ01242970;XR_265115 MODEL 8812664 protein-coding LOC102009630 U8 snoRNA-decapping enzyme-like NW_004955501 7101160 7103076 - 102009630 AGCD01064204;GBDF01154480;XM_005406843 XP_005406900 MODEL 8753643 protein-coding Ifnar1 interferon alpha and beta receptor subunit 1 ENCODES a protein that exhibits cytokine binding (ortholog); interferon receptor activity (ortholog); JAK pathway signal transduction adaptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN type I interferon signaling pathway; ASSOCIATED WITH bacterial pneumonia (ortholog); Cardiovirus Infections (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955407 32730973 32755404 + 102019983 AGCD01007680;GBDK01189202;XM_013504266;XM_013504267;XM_013504269 XP_013359720;XP_013359721;XP_013359723 MODEL 8762236 ncrna LOC102015722 uncharacterized LOC102015722 NW_004955418 3638310 3648153 - 102015722 AGCD01018796;AGCD01018797;GBDF01006642;XR_260539 MODEL 8723385 pseudo LOC102012742 gamma-aminobutyric acid receptor-associated protein pseudogene NW_004955409 17452914 17453267 - 102012742 AGCD01009784 MODEL 8728454 protein-coding Cytip cytohesin 1 interacting protein INVOLVED IN regulation of cell adhesion (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955449 15948739 15978641 + 102016766 AGCD01042204;GBDK01239047;XM_005393410;XM_013518801 XP_005393467;XP_013374255 MODEL 39133754 misc_rna 7SK 7SK RNA 39131826 rrna 5S_rRNA 5S ribosomal RNA 9037413 pseudo LOC102003782 solute carrier organic anion transporter family member 4C1 pseudogene NW_004955496 8201732 8203098 - 102003782 AGCD01062392 MODEL 39134037 misc_rna 7SK 7SK RNA 8820426 protein-coding CUNH16orf78 chromosome unknown C16orf78 homolog NW_004955433 7603234 7620319 + 102012466 AGCD01031574;GBDF01082318;XM_005388257 XP_005388314 MODEL 8849562 protein-coding Enho energy homeostasis associated ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN energy homeostasis (ortholog); positive regulation of Notch signaling pathway (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) NW_004955472 1597488 1599274 + 102028290 AGCD01053403;GBCB01042932;GBDI01326897;XM_005401075 XP_005401132 MODEL 8960196 pseudo LOC102021745 28S ribosomal protein S36, mitochondrial pseudogene NW_004955412 24132530 24132928 - 102021745 AGCD01013110;XM_005378380 MODEL 8740323 pseudo LOC102005596 TCDD-inducible poly [ADP-ribose] polymerase pseudogene NW_004955483 1094919 1097507 - 102005596 AGCD01057640 MODEL 8774127 protein-coding Bsx brain specific homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eating behavior (ortholog); locomotory behavior (ortholog); mammary gland involution (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955412 23796973 23801479 - 102019787 AGCD01013095;XM_005378374 XP_005378431 MODEL 8913437 ncrna LOC102013141 uncharacterized LOC102013141 NW_004955405 33232205 33299557 + 102013141 AGCD01005354;AGCD01005355;GBDF01178491;XR_001235744 MODEL 8997979 ncrna LOC102010354 uncharacterized LOC102010354 NW_004955468 803292 804816 + 102010354 AGCD01051739;GBDF01089481;XR_263369 MODEL 8979575 protein-coding Fbxo5 F-box protein 5 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); molecular function inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN DNA damage response (ortholog); microtubule polymerization (ortholog); negative regulation of cellular senescence (ortholog); FOUND IN cytoplasm (ortholog); meiotic spindle (ortholog); nucleoplasm (ortholog) NW_004955439 8830658 8843653 + 102026675 AGCD01035813;AGCD01035814;GBDF01287272;XM_005390570;XM_013517411 XP_005390627;XP_013372865 MODEL 8728399 ncrna LOC102015347 uncharacterized LOC102015347 NW_004955541 3245231 3247302 + 102015347 AGCD01071440;GBDF01187123;XR_001232133;XR_264844 MODEL 9006577 ncrna LOC102024478 uncharacterized LOC102024478 NW_004955502 1117433 1121988 + 102024478 AGCD01064258;GBDF01193812;XR_001231533 MODEL 8970498 protein-coding Cpne5 copine 5 INVOLVED IN positive regulation of dendrite extension (ortholog); FOUND IN neuron projection (ortholog); neuronal cell body (ortholog) NW_004955437 6153486 6218774 + 102025044 AGCD01034421;AGCD01034422;GBDF01117026;XM_005389636;XM_005389637;XM_005389638;XM_013517116 XP_005389693;XP_005389694;XP_005389695;XP_013372570 MODEL 8971611 protein-coding LOC102008488 palladin NW_004955403 37248908 37286650 - 102008488 AGCD01002565;GBCQ01040632;GBDJ01020208;XM_013513428 XP_013368882 MODEL 9045863 pseudo LOC102008136 ras-related protein Rab-8B pseudogene NW_004955431 13166481 13167496 - 102008136 AGCD01030286 MODEL 10366618 ncrna LOC106149937 uncharacterized LOC106149937 NW_004955458 6316072 6320403 + 106149937 AGCD01047557;GBBH01013693;XR_001236435;XR_001236436 MODEL 8773039 pseudo LOC102009242 nucleolar and spindle-associated protein 1 pseudogene NW_004955402 63057108 63065990 + 102009242 AGCD01001653 MODEL 8952687 ncrna LOC102008867 uncharacterized LOC102008867 NW_004955494 7040036 7040325 - 102008867 AGCD01061545;GBDF01288756;XR_264117 MODEL 8779368 ncrna LOC102017636 uncharacterized LOC102017636 NW_004955459 2075530 2078673 + 102017636 AGCD01047982;GBCQ01045566;XR_263005 MODEL 8777602 protein-coding Ivns1abp influenza virus NS1A binding protein INVOLVED IN negative regulation of intrinsic apoptotic signaling pathway (ortholog); negative regulation of protein ubiquitination (ortholog); response to virus (ortholog); ASSOCIATED WITH immunodeficiency 70 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955406 23866705 23881184 - 102009911 AGCD01006186;GBCQ01040029;XM_013521711;XM_013521714;XM_013521717 XP_013377165;XP_013377168;XP_013377171 MODEL 10362863 protein-coding Gpx1 glutathione peroxidase 1 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); peroxidase activity (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); apoptotic process (ortholog); arachidonate metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Lewy body (ortholog) NW_004955532 1298336 1298830 - 106147241 AGCD01070176;GBBH01002887;GBCB01000458;XM_013507631 XP_013363085 MODEL 8806755 protein-coding LOC102014231 interferon lambda-4-like NW_004955468 295047 309275 - 102014231 AGCD01051688;AGCD01051689;XM_013522287 XP_013377741 MODEL 8966172 protein-coding Csnk1e casein kinase 1 epsilon ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to nerve growth factor stimulus (ortholog); circadian behavior (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; ribosome biogenesis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); colon cancer (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); neuronal cell body (ortholog) NW_004955413 24560889 24591669 - 102016909 AGCD01014371;AGCD01014372;GBCB01042084;XM_005379247;XM_005379248;XM_005379250;XM_005379252;XM_013511621;XM_013511622 XP_005379304;XP_005379305;XP_005379307;XP_005379309;XP_013367075;XP_013367076 MODEL 8815965 protein-coding Dpyd dihydropyrimidine dehydrogenase ENCODES a protein that exhibits dihydropyrimidine dehydrogenase (NAD+) activity (ortholog); dihydropyrimidine dehydrogenase (NADP+) activity (ortholog); FAD binding (ortholog); INVOLVED IN circadian rhythm (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); PARTICIPATES IN beta-alanine metabolic pathway; beta-ureidopropionase deficiency pathway; carnosinemia pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955435 2007185 2800907 - 102020281 AGCD01032755;AGCD01032756;AGCD01032757;AGCD01032758;AGCD01032759;AGCD01032760;AGCD01032761;AGCD01032762;AGCD01032763;AGCD01032764;AGCD01032765;AGCD01032766;AGCD01032767;GBCQ01037635;XM_005389092 XP_005389149 MODEL 8998850 pseudo LOC102013523 heat shock protein HSP 90-alpha pseudogene NW_004955426 26341646 26343835 - 102013523 AGCD01026756 MODEL 8826739 ncrna LOC102019243 uncharacterized LOC102019243 NW_004955406 11927100 11938294 + 102019243 AGCD01005898;XR_001236357 MODEL 8878235 ncrna LOC102020980 uncharacterized LOC102020980 NW_004955407 25983361 25986001 - 102020980 AGCD01007522;GBDF01089471;XR_001231055;XR_001231056 MODEL 8856898 protein-coding LOC102011976 lysozyme C-like NW_004955470 12811161 12816338 - 102011976 AGCD01052943;GBCC01001129;XM_005400814 XP_005400871 MODEL 39132031 rrna 5S_rRNA 5S ribosomal RNA 8908613 protein-coding Erg28 ergosterol biosynthesis 28 homolog ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN transport vesicle (ortholog) NW_004955612 99107 109679 - 102022872 AGCD01077180;GBDK01014402;XM_005414961;XM_005414962 XP_005415018;XP_005415019 MODEL 8745531 protein-coding Cidea cell death inducing DFFA like effector a ENCODES a protein that exhibits lipid transfer activity (ortholog); phosphatidic acid binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cold (ortholog); fat cell differentiation (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); mitochondrial envelope (ortholog) NW_004955402 1090372 1096621 - 102011492 AGCD01000047;GBCB01087694;GBDI01064477;XM_005373138 XP_005373195 MODEL 9042449 protein-coding LOC102011137 olfactory receptor 4D11-like NW_004955511 4022531 4023466 + 102011137 AGCD01066488;XM_013506353 XP_013361807 MODEL 8952402 protein-coding LOC102020263 complement C1q and tumor necrosis factor-related protein 9 NW_004955497 4205700 4224087 - 102020263 AGCD01062569;GBBH01119189;XM_005406320;XM_005406321;XM_005406323;XM_013505469;XM_013505470;XM_013505471;XM_013505472;XM_013505473;XM_013505474;XM_013505475;XM_013505476;XM_013505477;XM_013505478;XM_013505479 XP_005406377;XP_005406378;XP_005406380;XP_013360923;XP_013360924;XP_013360925;XP_013360926;XP_013360927;XP_013360928;XP_013360929;XP_013360930;XP_013360931;XP_013360932;XP_013360933 MODEL 9050425 ncrna LOC102009632 uncharacterized LOC102009632 NW_004955427 7305557 7312900 - 102009632 AGCD01027048;GBDF01114554;XR_261237 MODEL 8776132 protein-coding Ankrd13c ankyrin repeat domain 13C ENCODES a protein that exhibits protein carrier chaperone (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); protein targeting to membrane (ortholog); regulation of anoikis (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955423 21599563 21666343 + 102006929 AGCD01023945;AGCD01023946;GBBH01035257;GBDJ01001182;XM_005385250 XP_005385307 MODEL 8850681 protein-coding Fbxo6 F-box protein 6 ENCODES a protein that exhibits carbohydrate binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Stevens-Johnson syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum quality control compartment (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955486 2197296 2205947 - 102009064 AGCD01058994;GBDI01168354;XM_005403997;XM_005403998;XM_005403999;XM_013504313;XM_013504314 XP_005404054;XP_005404055;XP_005404056;XP_013359767;XP_013359768 MODEL 8742346 protein-coding Ifnar2 interferon alpha and beta receptor subunit 2 ENCODES a protein that exhibits cytokine binding (ortholog); protein kinase binding (ortholog); type I interferon binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatitis B (ortholog); immunodeficiency 45 (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) NW_004955407 32601862 32637852 + 102018567 AGCD01007679;GBDI01354641;XM_005375676;XM_005375677;XM_013504240 XP_005375733;XP_005375734;XP_013359694 MODEL 8832602 protein-coding Il24 interleukin 24 INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); negative regulation of cell migration (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Lung Neoplasms (ortholog); pancreatic cancer (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955406 42431845 42437392 + 102023328 AGCD01006707;XM_013502798;XM_013502800;XM_013502801 XP_013358252;XP_013358254;XP_013358255 MODEL 9003366 protein-coding LOC102021746 leucine-rich repeat-containing protein 9 NW_004955466 9624286 9721243 - 102021746 AGCD01051047;AGCD01051048;AGCD01051049;AGCD01051050;AGCD01051051;GBDK01266613;XM_013522015 XP_013377469 MODEL 8879327 pseudo LOC102003785 translocation protein SEC62-like NW_004955426 65589 86951 + 102003785 AGCD01025993 MODEL 8914672 protein-coding LOC102007716 zinc finger protein 416 NW_004955584 345732 357089 - 102007716 AGCD01075940;GBDF01260674;XM_013509856;XR_001232513;XR_001232514 XP_013365310 MODEL 8742332 pseudo LOC102017637 RNA-binding protein 39 pseudogene NW_004955409 3013441 3014560 + 102017637 AGCD01009233 MODEL 8740468 ncrna LOC102014232 uncharacterized LOC102014232 NW_004955470 3643885 3651775 + 102014232 AGCD01052706;GBDF01189926;XR_263467 MODEL 8862403 ncrna LOC102015348 uncharacterized LOC102015348 NW_004955438 17034208 17055292 - 102015348 AGCD01035429;AGCD01035430;GBDF01277238;XR_261941 MODEL 8830704 pseudo LOC102013868 transmembrane protein 53 pseudogene NW_004955437 4200050 4200989 - 102013868 AGCD01034362 MODEL 8969422 protein-coding LOC102013142 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like NW_004955405 484163 518839 - 102013142 AGCD01004563;AGCD01004564;AGCD01004565;AGCD01004566;AGCD01004567;GBBH01035630;XM_013517294 XP_013372748 MODEL 8966981 protein-coding Dpys dihydropyrimidinase ENCODES a protein that exhibits amino acid binding (ortholog); dihydropyrimidinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN beta-alanine biosynthetic process (ortholog); cellular response to zinc ion (ortholog); CMP catabolic process (ortholog); PARTICIPATES IN beta-alanine metabolic pathway; beta-ureidopropionase deficiency pathway; carnosinemia pathway; ASSOCIATED WITH dihydropyrimidinase deficiency (ortholog); dihydropyrimidine dehydrogenase deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955417 28183771 28244309 - 102022082 AGCD01018574;AGCD01018575;GBBH01218824;GBCQ01035823;XM_013512744 XP_013368198 MODEL 8912303 pseudo LOC102024482 lymphoid-restricted membrane protein-like NW_004955504 5887375 5889998 - 102024482 AGCD01064907;XM_005407090 MODEL 8778441 ncrna LOC102014642 uncharacterized LOC102014642 NW_004955407 39365675 39370346 - 102014642 AGCD01007824;GBDF01192098;XR_001231676;XR_259627 MODEL 9055110 pseudo LOC102015725 E3 ubiquitin-protein ligase RNF130 pseudogene NW_004955419 5457561 5458697 - 102015725 AGCD01019810 MODEL 8712275 protein-coding Ehd3 EH domain containing 3 INVOLVED IN cilium assembly (ortholog); early endosome to Golgi transport (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); FOUND IN ciliary pocket membrane (ortholog); ciliary transition zone (ortholog); cilium (ortholog) NW_004955469 12953800 12984296 + 102023575 AGCD01052589;AGCD01052590;GBDK01084893;XM_005400561 XP_005400618 MODEL 9013244 pseudo LOC102008140 28S ribosomal protein S36, mitochondrial pseudogene NW_004955434 3982156 3983215 - 102008140 AGCD01032152 MODEL 39131827 rrna 5S_rRNA 5S ribosomal RNA 8796130 pseudo LOC102011563 serine/threonine-protein kinase Sgk1 pseudogene NW_004955426 24322315 24323612 + 102011563 AGCD01026676 MODEL 39134038 misc_rna 7SK 7SK RNA 8702508 pseudo LOC102016500 charged multivesicular body protein 5 pseudogene NW_004955428 13744889 13782648 + 102016500 AGCD01027962;AGCD01027963 MODEL 8930054 protein-coding Kcnj14 potassium inwardly rectifying channel subfamily J member 14 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); PARTICIPATES IN neuron-to-neuron signaling pathway via the chemical synapse; FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955559 2023993 2028082 - 102010422 AGCD01073687;GBDJ01223840;XM_005412953 XP_005413010 MODEL 8734258 protein-coding Abt1 activator of basal transcription 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); spinal cord motor neuron differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955483 307893 310932 - 102010587 AGCD01057606;GBBH01228186;XM_005403274 XP_005403331 MODEL 39134341 misc_rna 7SK 7SK RNA 8840664 protein-coding Dhx32 DEAH-box helicase 32 (putative) ASSOCIATED WITH Thyroid Neoplasms (ortholog); FOUND IN mitochondrion (ortholog) NW_004955477 3720988 3778424 - 102009496 AGCD01055562;AGCD01055563;AGCD01055564;AGCD01055565;AGCD01055566;GBBH01050486;GBDJ01273219;XM_013503051 XP_013358505 MODEL 8880768 protein-coding LOC102020594 acyl-CoA dehydrogenase family member 9, mitochondrial-like NW_004955429 18133117 18155062 + 102020594 AGCD01028881;GBBH01021101;XM_005387111;XM_013515559 XP_005387168;XP_013371013 MODEL 8923858 pseudo LOC102005598 pre-mRNA-splicing factor SLU7 pseudogene NW_004955419 21338887 21343992 - 102005598 AGCD01020272 MODEL 8822208 protein-coding CUNH16orf86 chromosome unknown C16orf86 homolog NW_004955484 9013743 9015836 - 102025688 AGCD01058403;GBDF01045501;XM_013503956;XM_013503957;XM_013503958 XP_013359410;XP_013359411;XP_013359412 MODEL 8754332 protein-coding Il25 interleukin 25 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN eosinophil differentiation (ortholog); inflammatory response (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH allergic asthma (ortholog); allergic rhinitis (ortholog); Amoebic Dysentery due to Entamoeba Histolytica (ortholog); FOUND IN extracellular space (ortholog) NW_004955409 36960902 36964038 - 102020773 AGCD01010484;XM_013510236 XP_013365690 MODEL 8859584 ncrna LOC102017639 uncharacterized LOC102017639 NW_004955410 16877529 16903847 - 102017639 AGCD01010974;GBDF01000533;XR_001232696;XR_259842 MODEL 39132032 rrna 5S_rRNA 5S ribosomal RNA 8743006 pseudo LOC102016129 E3 ubiquitin-protein ligase RBX1 pseudogene NW_004955454 2567323 2567736 - 102016129 AGCD01045023;XM_005395821 MODEL 8951458 pseudo LOC102012743 spliceosome-associated protein CWC15 homolog pseudogene NW_004955409 26641679 26646568 + 102012743 AGCD01010196 MODEL 9008835 protein-coding Cpne6 copine 6 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of dendrite extension (ortholog); postsynaptic actin cytoskeleton organization (ortholog); FOUND IN axon (ortholog); clathrin-coated endocytic vesicle (ortholog); cytoplasm (ortholog) NW_004955409 36315353 36322646 - 102014425 AGCD01010456;XM_005377055;XM_013510257 XP_005377112;XP_013365711 MODEL 8914286 protein-coding Ddx17 DEAD-box helicase 17 ENCODES a protein that exhibits chromatin DNA binding (ortholog); lncRNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); androgen receptor signaling pathway (ortholog); epithelial to mesenchymal transition (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955413 24646317 24664614 - 102019792 AGCD01014373;GBDF01049351;XM_005379258;XM_005379259 XP_005379315;XP_005379316 MODEL 8740717 protein-coding Cytl1 cytokine like 1 INVOLVED IN cartilage homeostasis (ortholog); chondrocyte differentiation (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog) NW_004955514 4826792 4831424 + 102024943 AGCD01067141;GBCB01053473;XM_005408829 XP_005408886 MODEL 10092747 pseudo LOC106149938 nuclear receptor-binding factor 2-like NW_004955458 4313033 4317638 - 106149938 AGCD01047404;AGCD01047405 MODEL 8859237 protein-coding LOC102009244 high mobility group protein B1-like NW_004957564 9 553 + 102009244 AGCD01080960;XM_005415232 XP_005415289 MODEL 8793086 protein-coding LOC102008868 CD70 antigen-like NW_004955495 3023146 3026631 - 102008868 AGCD01061815;GBDK01116023;XM_005405704;XM_005405705;XM_013505038;XM_013505039 XP_005405761;XP_005405762;XP_013360492;XP_013360493 MODEL 8717283 protein-coding LOC102013146 gametocyte-specific factor 1-like NW_004955458 1718253 1730596 - 102013146 AGCD01047201;AGCD01047202;GBBH01224139;XM_013520795 XP_013376249 MODEL 8931768 protein-coding Iws1 interacts with SUPT6H, CTD assembly factor 1 INVOLVED IN chromatin remodeling (ortholog); gene expression (ortholog); in utero embryonic development (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955459 3021320 3063363 + 102029941 AGCD01048006;AGCD01048007;GBDI01188072;XM_005397606;XM_005397607;XM_005397608;XM_013521080;XR_263010 XP_005397663;XP_005397664;XP_005397665;XP_013376534 MODEL 9051664 protein-coding Gpx2 glutathione peroxidase 2 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); negative regulation of inflammatory response to antigenic stimulus (ortholog); response to salicylic acid (ortholog); ASSOCIATED WITH alcoholic gastritis (ortholog); autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955466 4983532 4987780 + 102025776 AGCD01050864;GBCB01103114;XM_005399115 XP_005399172 MODEL 8958557 ncrna LOC102013525 uncharacterized LOC102013525 NW_004955505 4680056 4680662 + 102013525 AGCD01065126;GBDF01224478;XR_264309 MODEL 39134039 misc_rna 7SK 7SK RNA 8976681 ncrna LOC102003787 uncharacterized LOC102003787 NW_004955505 1073276 1075559 - 102003787 AGCD01064967;GBDF01042900;XR_264300 MODEL 8813610 protein-coding Ehd4 EH domain containing 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to growth factor stimulus (ortholog); endocytic recycling (ortholog); FOUND IN adherens junction (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955416 8686709 8758096 - 102016380 AGCD01017065;AGCD01017066;GBCQ01006474;GBDJ01135715;XM_005381320 XP_005381377 MODEL 39133755 misc_rna 7SK 7SK RNA 8746211 pseudo LOC102010355 protein tyrosine phosphatase type IVA 1 pseudogene NW_004955414 6560097 6560687 - 102010355 AGCD01014920;XM_005379741;XM_005379742;XM_005379743 MODEL 9038553 protein-coding LOC102019244 translation initiation factor IF-2-like NW_004955408 5772215 5775715 - 102019244 AGCD01008152;GBCB01043675;GBDF01074209;XM_013508552 XP_013364006 MODEL 8722159 protein-coding Enkd1 enkurin domain containing 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN establishment of mitotic spindle orientation (ortholog); motile cilium assembly (ortholog); non-motile cilium assembly (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955484 9015744 9019781 + 102025124 AGCD01058403;GBDJ01311527;XM_005403628;XM_005403629 XP_005403685;XP_005403686 MODEL 8859465 protein-coding Btaf1 B-TFIID TATA-box binding protein associated factor 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); transcription coregulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955425 1239640 1350327 - 102014377 AGCD01025219;AGCD01025220;AGCD01025221;AGCD01025222;AGCD01025223;GBBH01149822;GBDK01319184;XM_013514876 XP_013370330 MODEL 8765183 protein-coding LOC102020265 melanoma-associated antigen 8-like NW_004955498 2915975 2916949 - 102020265 AGCD01062848;XM_005406474 XP_005406531 MODEL 8717643 protein-coding Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Contracture (ortholog); neurogenic-type arthrogryposis multiplex congenita-2 (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); nucleoplasm (ortholog) NW_004955408 25540149 25644108 + 102027272 AGCD01008647;GBCB01057939;XM_005376342;XM_013509355;XM_013509357;XM_013509359 XP_005376399;XP_013364809;XP_013364811;XP_013364813 MODEL 8867831 protein-coding Cideb cell death inducing DFFA like effector b ENCODES a protein that exhibits identical protein binding (ortholog); lipid transfer activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); COPII-coated vesicle cargo loading (ortholog); execution phase of apoptosis (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955409 35993853 35996935 + 102004249 AGCD01010438;GBCQ01012226;XM_005377019 XP_005377076 MODEL 9015206 ncrna LOC102015726 uncharacterized LOC102015726 NW_004955485 804026 805336 - 102015726 AGCD01058459;GBDF01265224;XR_263902 MODEL 8885126 protein-coding Ankrd13d ankyrin repeat domain 13D ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955422 18159337 18170480 - 102024810 AGCD01022938;GBCE01123588;XM_005384354;XM_013513947;XM_013513948;XM_013513949;XM_013513951;XM_013513952;XM_013513953;XM_013513954 XP_005384411;XP_013369401;XP_013369402;XP_013369403;XP_013369405;XP_013369406;XP_013369407;XP_013369408 MODEL 8947975 protein-coding Ifnb1 interferon beta 1 ENCODES a protein that exhibits chloramphenicol O-acetyltransferase activity (ortholog); cytokine activity (ortholog); cytokine receptor binding (ortholog); INVOLVED IN adaptive immune response (ortholog); B cell activation involved in immune response (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH amelanotic melanoma (ortholog); anus benign neoplasm (ortholog); Aortic Remodeling (ortholog); FOUND IN extracellular space (ortholog) NW_004955434 23301623 23302304 - 102004511 AGCD01032701;XM_005388742 XP_005388799 MODEL 8921405 protein-coding Csnk1g1 casein kinase 1 gamma 1 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog) NW_004955450 11088601 11239227 + 102017727 AGCD01042647;AGCD01042648;AGCD01042649;AGCD01042650;AGCD01042651;GBCB01036123;GBDF01047813;XM_013518865 XP_013374319 MODEL 8966333 protein-coding Dpysl2 dihydropyrimidinase like 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); endocytosis (ortholog); olfactory bulb development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955403 49188259 49306916 + 102028153 AGCD01002936;AGCD01002937;AGCD01002938;GBBH01036823;XM_005373727;XM_005373729 XP_005373784;XP_005373786 MODEL 9039356 protein-coding Fbxo7 F-box protein 7 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein kinase binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH genetic disease (ortholog); Parkinson's disease (ortholog); Parkinson's disease 15 (ortholog); FOUND IN classical Lewy body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 41429421 41449670 + 102029698 AGCD01005551;AGCD01005552;GBBH01089539;GBDF01004268;XM_013519159 XP_013374613 MODEL 9019007 ncrna LOC102021747 uncharacterized LOC102021747 NW_004955467 2672508 2696145 - 102021747 AGCD01051319;GBDF01160694;XR_001236840;XR_001236841 MODEL 8764911 protein-coding LOC102007719 RNA polymerase II elongation factor ELL2-like NW_004955595 658812 660714 - 102007719 AGCD01076475;GBDF01287937;XM_005414679 XP_005414736 MODEL 9001857 ncrna LOC102020981 uncharacterized LOC102020981 NW_004955407 39837562 39843069 + 102020981 AGCD01007837;GBDF01236228;XR_001231370 MODEL 8946897 protein-coding Enkur enkurin, TRPC channel interacting protein ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN establishment of left/right asymmetry (ortholog); flagellated sperm motility (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); acrosomal vesicle (ortholog) NW_004955429 4182507 4203275 + 102007452 AGCD01028483;GBDF01085329;XM_005386899;XM_005386900 XP_005386956;XP_005386957 MODEL 8701226 protein-coding LOC102014248 olfactory receptor 6F1-like NW_004955418 30394643 30395602 + 102014248 AGCD01019515;XM_005382375 XP_005382432 MODEL 8919494 protein-coding Iyd iodotyrosine deiodinase ENCODES a protein that exhibits FMN binding (ortholog); iodotyrosine deiodinase activity (ortholog); INVOLVED IN thyroid hormone metabolic process (ortholog); tyrosine metabolic process (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); Experimental Liver Cirrhosis (ortholog); thyroid dyshormonogenesis 4 (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955439 10998797 11060078 - 102005418 AGCD01035890;AGCD01035891;GBDI01224509;XM_005390590;XM_013517319;XR_261977 XP_005390647;XP_013372773 MODEL 8968521 protein-coding Dhx33 DEAH-box helicase 33 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); double-stranded RNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN obsolete positive regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog); NLRP3 inflammasome complex (ortholog); nucleolus (ortholog) NW_004955467 10797464 10819083 - 102028397 AGCD01051584;GBCQ01060054;XM_005399647 XP_005399704 MODEL 8835907 protein-coding Il26 interleukin 26 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); positive regulation of cytokine production (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog) NW_004955458 14701471 14718980 - 102028721 AGCD01047844;AGCD01047845;GBBH01023513;XM_005397467 XP_005397524 MODEL 8848216 ncrna LOC102013870 uncharacterized LOC102013870 NW_004955438 12906410 12911495 - 102013870 AGCD01035275;GBDF01162314;XR_001235129;XR_261929 MODEL 8960200 protein-coding LOC102021748 putative olfactory receptor 10D4 NW_004955412 24699372 24700304 + 102021748 AGCD01013121;XM_005378634 XP_005378691 MODEL 8714015 protein-coding LOC102009633 chromosome unknown open reading frame, human C17orf62 INVOLVED IN calcium ion transport (ortholog); gene expression (ortholog); innate immune response (ortholog); ASSOCIATED WITH autosomal recessive chronic granulomatous disease 5 (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955506 697091 702900 + 102009633 AGCD01065234;GBCQ01009071;XM_005407199;XM_005407201;XM_005407202;XM_013506085;XM_013506086 XP_005407256;XP_005407258;XP_005407259;XP_013361539;XP_013361540 MODEL 8918321 protein-coding LOC102014643 keratin-associated protein 19-3-like NW_004955407 29848272 29848502 - 102014643 AGCD01007615;XM_005375971 XP_005376028 MODEL 8842261 pseudo LOC102008143 ras-related protein Rab-28 pseudogene NW_004955435 20586269 20586938 - 102008143 AGCD01033457 MODEL 39131828 rrna 5S_rRNA 5S ribosomal RNA 8803746 protein-coding Cyyr1 cysteine and tyrosine rich 1 NW_004955407 26208335 26313566 - 102021309 AGCD01007525;AGCD01007526;AGCD01007527;GBDJ01299809;XM_005375600 XP_005375657 MODEL 39134342 misc_rna 7SK 7SK RNA 8870099 protein-coding Abtb1 ankyrin repeat and BTB domain containing 1 FOUND IN cytosol (ortholog) NW_004955429 15964584 15968604 - 102029098 AGCD01028824;GBDJ01090295;XM_005387052 XP_005387109 MODEL 8775286 protein-coding Ergic2 ERGIC and golgi 2 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955505 5548588 5583503 + 102015131 AGCD01065152;GBDF01112264;XM_005407138;XM_005407139;XM_005407140;XM_013505937;XM_013505938 XP_005407195;XP_005407196;XP_005407197;XP_013361391;XP_013361392 MODEL 8981706 pseudo LOC102013154 lys-63-specific deubiquitinase BRCC36-like NW_004955466 7752096 7926894 + 102013154 AGCD01050961;AGCD01050962;AGCD01050963;AGCD01050964;AGCD01050965;AGCD01050966;AGCD01050967;AGCD01050968;AGCD01050969;AGCD01050970;AGCD01050971;AGCD01050972 MODEL 8897119 ncrna LOC102008489 uncharacterized LOC102008489 NW_004956123 1825 3767 - 102008489 AGCD01079091;GBDF01090413;XR_001232607;XR_265205 MODEL 8819152 protein-coding Hsd17b8 hydroxysteroid 17-beta dehydrogenase 8 ENCODES a protein that exhibits (3R)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); NADH binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen biosynthetic process (ortholog); estrogen metabolic process (ortholog); FOUND IN membrane (ortholog); mitochondrial envelope (ortholog); mitochondrial matrix (ortholog) NW_004955437 1778276 1780397 + 102027337 AGCD01034233;GBDI01074933;XM_005389472;XR_261825 XP_005389529 MODEL 8716170 pseudo LOC102011138 mitochondrial calcium uniporter regulator 1 pseudogene NW_004955430 1898687 1900786 - 102011138 AGCD01029142 MODEL 8963469 protein-coding CUNH16orf87 chromosome unknown C16orf87 homolog NW_004955448 333903 366598 - 102015256 AGCD01041229;AGCD01041230;GBBH01180476;GBCE01138509;XM_013518584 XP_013374038 MODEL 39133756 misc_rna 7SK 7SK RNA 8938232 pseudo LOC102015349 zinc finger CCCH domain-containing protein 15-like NW_004955543 941013 942296 + 102015349 AGCD01071608 MODEL 8934957 protein-coding LOC102024487 melanoma-associated antigen B5-like NW_004955509 6427045 6430028 + 102024487 AGCD01066122;GBDF01213466;XM_013506290 XP_013361744 MODEL 9014031 ncrna LOC102017640 uncharacterized LOC102017640 NW_004955463 4830363 4852657 + 102017640 AGCD01049617;AGCD01049618;AGCD01049619;XR_263145;XR_263146 MODEL 8930660 protein-coding LOC102016130 histone H2A.V ENCODES a protein that exhibits molecular adaptor activity (ortholog); FOUND IN nucleus (ortholog) NW_004955456 7364329 7374786 + 102016130 AGCD01046412;AGCD01046413;GBDF01008221;XM_005396652 XP_005396709 MODEL 8950800 protein-coding LOC102012744 cleavage stimulation factor subunit 2 tau variant-like NW_004955462 1470966 1474745 + 102012744 AGCD01049120;XM_013521365 XP_013376819 MODEL 9036095 protein-coding LOC102011568 olfactory receptor 1013-like NW_004955511 1833015 1833950 + 102011568 AGCD01066381;XM_005407979 XP_005408036 MODEL 10120789 pseudo LOC106149939 small nuclear ribonucleoprotein E-like NW_004955458 975486 975893 - 106149939 AGCD01047160 MODEL 8724002 protein-coding Btbd1 BTB domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Delayed Emergence from Anesthesia (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); P-body (ortholog) NW_004955416 13621343 13657276 + 102011986 AGCD01017229;GBDF01004869;XM_013512487 XP_013367941 MODEL 8707577 protein-coding Ddx18 DEAD-box helicase 18 INVOLVED IN cellular response to estradiol stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955459 11799435 11810973 - 102027723 AGCD01048237;GBCB01076894;XM_005397693 XP_005397750 MODEL 9041515 protein-coding Cpne7 copine 7 INVOLVED IN cellular response to calcium ion (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955541 3159485 3170304 + 102028801 AGCD01071438;AGCD01071439;GBDJ01261914;XM_013507941 XP_013363395 MODEL 8784216 ncrna LOC102008869 uncharacterized LOC102008869 NW_004955423 21824204 21851556 + 102008869 AGCD01023949;GBCQ01142430;XR_260986 MODEL 8778323 protein-coding LOC102011979 protein unc-13 homolog B NW_004955472 869993 1019542 - 102011979 AGCD01053364;AGCD01053365;AGCD01053366;AGCD01053367;GBDF01156325;GBDK01081960;XM_013522964;XM_013522965;XM_013522966;XM_013522967 XP_013378418;XP_013378419;XP_013378420;XP_013378421 MODEL 8936850 pseudo LOC102005606 eukaryotic translation initiation factor 5A-2 pseudogene NW_004955422 22271814 22272275 - 102005606 AGCD01023153 MODEL 9039477 ncrna LOC102007724 uncharacterized LOC102007724 NW_004955403 45845767 45849351 - 102007724 AGCD01002838;GBDF01008253;XR_259240 MODEL 9003977 protein-coding LOC102013527 olfactory receptor 5AK2-like NW_004955511 2117904 2118839 + 102013527 AGCD01066392;XM_005407984 XP_005408041 MODEL 39132033 rrna 5S_rRNA 5S ribosomal RNA 8748836 ncrna LOC102008872 uncharacterized LOC102008872 NW_004955424 19963501 19969899 + 102008872 AGCD01024841;GBDI01147421;XR_001234129;XR_001234130;XR_001234131;XR_261086;XR_261087 MODEL 8928753 ncrna LOC102019246 uncharacterized LOC102019246 NW_004955408 33245705 33259346 + 102019246 AGCD01008864;AGCD01008865;XR_259729 MODEL 8864807 protein-coding Dhx34 DExH-box helicase 34 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); positive regulation of phosphorylation (ortholog); ASSOCIATED WITH Dwarfism (ortholog); epilepsy (ortholog); Neurodevelopmental Disorders (ortholog) NW_004955574 1248058 1267399 + 102009334 AGCD01075171;GBDJ01135621;XM_005413866;XM_013509536;XM_013509537 XP_005413923;XP_013364990;XP_013364991 MODEL 9036195 protein-coding LOC102016502 vomeronasal type-1 receptor 90-like NW_004955429 12270196 12271125 - 102016502 AGCD01028709;XM_005387243 XP_005387300 MODEL 8753689 protein-coding Cidec cell death inducing DFFA like effector c ENCODES a protein that exhibits lipid transfer activity (ortholog); molecular condensate scaffold activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN apoptotic process (ortholog); execution phase of apoptosis (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 5 (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog) NW_004955561 1363907 1376144 - 102023081 AGCD01073851;AGCD01073852;AGCD01073853;GBDJ01009118;XM_013509089;XM_013509090;XM_013509091 XP_013364543;XP_013364544;XP_013364545 MODEL 8858682 pseudo LOC102013871 olfactory receptor 12-like NW_004955542 1252343 1253122 - 102013871 AGCD01071498 MODEL 8868980 protein-coding Kcnj15 potassium inwardly rectifying channel subfamily J member 15 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); systemic juvenile rheumatoid arthritis (ortholog) NW_004955407 37261892 37313484 + 102018468 AGCD01007779;GBCQ01096829;XM_005375758;XM_013504738;XM_013504739;XM_013504744;XM_013504746;XM_013504750;XM_013504757;XR_001231265;XR_001231266 XP_005375815;XP_013360192;XP_013360193;XP_013360198;XP_013360200;XP_013360204;XP_013360211 MODEL 8947230 protein-coding LOC102020595 olfactory receptor 1044 NW_004955511 1517014 1517973 + 102020595 AGCD01066370;XM_005408233 XP_005408290 MODEL 8948617 protein-coding Ifne interferon epsilon INVOLVED IN defense response to bacterium (ortholog); defense response to virus (ortholog); natural killer cell activation (ortholog) NW_004955472 12795352 12801035 - 102006570 AGCD01053817;XM_005401170 XP_005401227 MODEL 39134040 misc_rna 7SK 7SK RNA 8936557 protein-coding Fbxo8 F-box protein 8 INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN ubiquitin ligase complex (ortholog) NW_004955403 32798827 32845684 + 102022659 AGCD01002441;GBCQ01096548;XM_005373536 XP_005373593 MODEL 8836267 protein-coding Czib CXXC motif containing zinc binding protein ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH carnitine palmitoyltransferase II deficiency (ortholog) NW_004955464 5930805 5937061 + 102012413 AGCD01050015;GBCE01031785;XM_005398560;XM_013521688;XM_013521689;XM_013521690 XP_005398617;XP_013377142;XP_013377143;XP_013377144 MODEL 8931273 pseudo LOC102020991 N-acetylglucosamine-6-sulfatase pseudogene NW_004955464 12189628 12191423 + 102020991 AGCD01050183 MODEL 8989177 protein-coding Dpysl3 dihydropyrimidinase like 3 ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); filamin binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cell body (ortholog); cytosol (ortholog); exocytic vesicle (ortholog) NW_004955415 6703212 6813906 + 102011532 AGCD01016024;AGCD01016025;GBCE01000165;XM_005380656;XM_005380657;XM_005380658 XP_005380713;XP_005380714;XP_005380715 MODEL 8866976 protein-coding LOC102003791 olfactory receptor 5D18-like NW_004955511 564979 565959 - 102003791 AGCD01066333;XM_005408200 XP_005408257 MODEL 8937083 protein-coding Abtb2 ankyrin repeat and BTB domain containing 2 INVOLVED IN cellular response to toxic substance (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 11913334 12082421 + 102017992 AGCD01022773;AGCD01022774;AGCD01022775;AGCD01022776;GBCQ01153025;XM_005384147 XP_005384204 MODEL 8835000 protein-coding Eno1 enolase 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); GTPase binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955486 4275371 4287152 + 102025912 AGCD01059057;GBDF01006171;XM_005404048;XM_005404051 XP_005404105;XP_005404108 MODEL 8791676 protein-coding Izumo1 izumo sperm-oocyte fusion 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein binding involved in heterotypic cell-cell adhesion (ortholog); protein homodimerization activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955559 1825589 1830535 + 102004864 AGCD01073672;GBDF01187490;XM_005412934;XM_013508990;XM_013508991;XM_013508992 XP_005412991;XP_013364444;XP_013364445;XP_013364446 MODEL 8857631 protein-coding Ehf ETS homologous factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 11599245 11640828 - 102014792 AGCD01022763;GBCQ01062677;XM_013514292;XM_013514293 XP_013369746;XP_013369747 MODEL 8769645 pseudo LOC102011140 thioredoxin pseudogene NW_004955512 2762023 2762354 - 102011140 AGCD01066685 MODEL 39133757 misc_rna 7SK 7SK RNA 8773732 protein-coding CUNH16orf89 chromosome unknown C16orf89 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955442 12496862 12507655 + 102027576 AGCD01037737;GBDF01030121;XM_005391253;XM_005391254;XM_005391255 XP_005391310;XP_005391311;XP_005391312 MODEL 8987205 pseudo LOC102021750 40S ribosomal protein S15a pseudogene NW_004955469 6142084 6142956 + 102021750 AGCD01052365 MODEL 8856988 protein-coding Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 ENCODES a protein that exhibits 3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity (ortholog); steroid Delta-isomerase activity (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); C21-steroid hormone biosynthetic process (ortholog); hippocampus development (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH Adrenal Hyperplasia 2 (ortholog); Alzheimer's disease (ortholog); congenital adrenal hyperplasia (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955435 22414605 22421682 + 102015342 AGCD01033503;GBCQ01073845;XM_013516570;XM_013516571 XP_013372024;XP_013372025 MODEL 8959389 pseudo LOC102015743 mitochondrial dynamics protein MID51 pseudogene NW_004955424 14961240 14963238 + 102015743 AGCD01024669 MODEL 9066203 protein-coding LOC102009638 olfactory receptor 5M11-like NW_004955511 1723110 1724093 + 102009638 AGCD01066377;XM_005407974 XP_005408031 MODEL 8926148 pseudo LOC102008145 kinesin-associated protein 3 pseudogene NW_004955436 21887648 21900523 - 102008145 AGCD01034080 MODEL 8887043 ncrna LOC102008873 uncharacterized LOC102008873 NW_004955427 6400197 6403763 + 102008873 AGCD01027028;GBDF01126299;XR_261236 MODEL 8735859 ncrna LOC102019247 uncharacterized LOC102019247 NW_004955458 10688241 10689288 + 102019247 AGCD01047701;GBCQ01143269;XR_262993 MODEL 39131830 rrna 5S_rRNA 5S ribosomal RNA 8872178 pseudo LOC102012748 mothers against decapentaplegic homolog 5 pseudogene NW_004955412 6157467 6159343 + 102012748 AGCD01012666 MODEL 8891070 protein-coding Ankrd16 ankyrin repeat domain 16 INVOLVED IN tRNA modification (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955421 22520707 22535618 - 102027989 AGCD01022138;AGCD01022139;GBDJ01350347;XM_005383851;XM_013513667;XM_013513668 XP_005383908;XP_013369121;XP_013369122 MODEL 39134343 misc_rna 7SK 7SK RNA 8991985 protein-coding Csnk1g2 casein kinase 1 gamma 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; FOUND IN cytosol (ortholog) NW_004955495 6087159 6103413 - 102022938 AGCD01062050;GBBH01030797;XM_005405937;XM_005405938 XP_005405994;XP_005405995 MODEL 9011541 protein-coding Ddx19b DEAD-box helicase 19B PARTICIPATES IN NXF1-NXT1 export pathway; FOUND IN nuclear envelope (ortholog) NW_004955484 3120480 3137917 + 102029296 AGCD01058155;AGCD01058156;GBDJ01191119;XM_005403472 XP_005403529 MODEL 8713550 protein-coding Gpx3 glutathione peroxidase 3 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); identical protein binding (ortholog); mercury ion binding (ortholog); INVOLVED IN hydrogen peroxide catabolic process (ortholog); response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); response to corticosterone (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); FOUND IN extracellular space (ortholog) NW_004955408 2622162 2629088 - 102019030 AGCD01008015;GBCQ01000317;XM_005376065 XP_005376122 MODEL 8981012 protein-coding Btbd10 BTB domain containing 10 INVOLVED IN positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955414 28748835 28809735 - 102017326 AGCD01015685;AGCD01015686;AGCD01015687;AGCD01015688;GBDJ01314884;XM_005380310;XM_005380311;XM_005380313 XP_005380367;XP_005380368;XP_005380370 MODEL 8873618 pseudo LOC102008491 60S ribosomal protein L24 pseudogene NW_004955403 25635577 25636027 + 102008491 AGCD01002291 MODEL 8894736 protein-coding LOC102014254 uncharacterized LOC102014254 NW_004955420 29515927 29530159 + 102014254 AGCD01021509;GBDJ01291266;XM_013513574;XR_001233782;XR_001233783;XR_001233784;XR_001233785;XR_001233786;XR_001233787 XP_013369028 MODEL 8814640 protein-coding Kcnj16 potassium inwardly rectifying channel subfamily J member 16 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); regulation of pH (ortholog); ASSOCIATED WITH Brugada syndrome 1 (ortholog); hypokalemia (ortholog); Hypokalemic Tubulopathy and Deafness (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955478 2775702 2833821 - 102022077 AGCD01055804;AGCD01055805;GBDI01327287;XM_005402101;XM_005402102;XM_005402103;XM_013503245 XP_005402158;XP_005402159;XP_005402160;XP_013358699 MODEL 9002569 protein-coding LOC102020267 chromosome unknown open reading frame, human C5orf22 NW_004955426 17505273 17521743 + 102020267 AGCD01026502;GBCB01058741;XM_005386150 XP_005386207 MODEL 8976222 protein-coding LOC102015351 olfactory receptor 4K3-like NW_004955550 529055 537383 + 102015351 AGCD01072509;XM_013508555 XP_013364009 MODEL 8729472 pseudo LOC102009251 heterogeneous nuclear ribonucleoprotein D-like pseudogene NW_004955455 3817536 3818804 + 102009251 AGCD01045653;XR_262827 MODEL 8964187 protein-coding Il27 interleukin 27 ENCODES a protein that exhibits interleukin-27 receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of defense response to virus by host (ortholog); positive regulation of type II interferon production (ortholog); regulation of T cell proliferation (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Arenaviridae infectious disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955493 6712005 6717417 - 102016819 AGCD01061131;GBDK01404205;XM_005405170 XP_005405227 MODEL 8709564 protein-coding LOC102024488 olfactory receptor 1020-like NW_004955511 1747705 1751671 + 102024488 AGCD01066378;XM_005408242 XP_005408299 MODEL 9046079 pseudo LOC102014647 DNA repair protein complementing XP-A cells-like NW_004955408 3477657 3481466 + 102014647 AGCD01008058 MODEL 10190939 protein-coding LOC102010356 uncharacterized LOC102010356 NW_004955470 374789 391272 - 102010356 AGCD01052609;GBCE01002380;XM_013522686 XP_013378140 MODEL 8733024 protein-coding LOC102011570 olfactory receptor 10AG1-like NW_004955511 924080 925039 - 102011570 AGCD01066346;XM_005408218 XP_005408275 MODEL 8896777 protein-coding CUNH16orf90 chromosome unknown C16orf90 homolog NW_004955442 13890284 13892362 + 102024618 AGCD01037795;GBDF01062070;XM_005391341;XM_005391342 XP_005391398;XP_005391399 MODEL 8883047 protein-coding LOC102013156 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10918926 10962941 - 102013156 AGCD01051587;AGCD01051588;AGCD01051589;AGCD01051590;XM_013522040 XP_013377494 MODEL 8850755 protein-coding Ergic3 ERGIC and golgi 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of intracellular protein transport (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); Experimental Neoplasms (ortholog); lung adenocarcinoma (ortholog) NW_004955422 25884138 25893237 - 102010597 AGCD01023269;GBDF01008497;XM_005384790;XM_005384791 XP_005384847;XP_005384848 MODEL 8792325 protein-coding Dhx35 DEAH-box helicase 35 INVOLVED IN in utero embryonic development (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog) NW_004955445 17753975 17827748 - 102007949 AGCD01039896;GBCB01099680;XM_005392524 XP_005392581 MODEL 39131831 rrna 5S_rRNA 5S ribosomal RNA 8702549 ncrna LOC102020599 uncharacterized LOC102020599 NW_004955515 3783964 3807130 - 102020599 AGCD01067303;AGCD01067304;AGCD01067305;GBDF01304550;XR_264524 MODEL 8804447 protein-coding LOC102019249 olfactory receptor 6C6-like NW_004955458 2636013 2646641 - 102019249 AGCD01047240;XM_005397498;XM_013520811 XP_005397555;XP_013376265 MODEL 8778156 protein-coding LOC102005607 uncharacterized protein C7orf34 homolog NW_004955494 875367 876635 + 102005607 AGCD01061387;GBDF01006174;XM_005405389;XM_005405390 XP_005405446;XP_005405447 MODEL 9055192 protein-coding Ankrd17 ankyrin repeat domain 17 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blood vessel maturation (ortholog); defense response to bacterium (ortholog); innate immune response (ortholog); ASSOCIATED WITH CHOPRA-AMIEL-GORDON SYNDROME (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955447 259654 376147 + 102018039 AGCD01040450;GBDK01196552;XM_005392762;XM_005392763;XM_005392764;XM_005392765;XM_005392766;XM_005392767 XP_005392819;XP_005392820;XP_005392821;XP_005392822;XP_005392823;XP_005392824 MODEL 8755019 pseudo LOC102020992 phosphatidylinositol-glycan biosynthesis class F protein pseudogene NW_004955411 26597485 26598083 + 102020992 AGCD01012180 MODEL 9002250 protein-coding LOC102007725 ubiquitin carboxyl-terminal hydrolase 16-like NW_004957393 10 1496 + 102007725 AGCD01080789;GBCC01037265;XM_013510251 XP_013365705 MODEL 9011052 protein-coding Fbxo9 F-box protein 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); innate immune response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955411 2960517 2993787 - 102012617 AGCD01011528;AGCD01011529;AGCD01011530;GBBH01118710;XM_005377610 XP_005377667 MODEL 9059370 ncrna LOC102016131 uncharacterized LOC102016131 NW_004955407 42491276 42493477 - 102016131 AGCD01007892;XR_259640;XR_259641 MODEL 8846591 protein-coding LOC102017641 tubulin beta-2A chain-like NW_004955465 10090568 10092941 + 102017641 AGCD01050501;GBDK01005775;XM_005398904 XP_005398961 MODEL 39133758 misc_rna 7SK 7SK RNA 10373515 protein-coding LOC106149941 uncharacterized LOC106149941 NW_004955458 3649750 3653101 - 106149941 AGCD01047331;AGCD01047332;XM_013520803 XP_013376257 MODEL 8711549 protein-coding Izumo1r IZUMO1 receptor, JUNO ENCODES a protein that exhibits folic acid binding (ortholog); signaling receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell adhesion (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); single fertilization (ortholog); FOUND IN plasma membrane (ortholog) NW_004955414 283646 287422 - 102018589 AGCD01014715;GBDI01316974;XM_005379681;XM_013511756;XM_013511758 XP_005379738;XP_013367210;XP_013367212 MODEL 8735775 pseudo LOC102013873 mortality factor 4-like protein 2 NW_004955439 20947402 20948202 - 102013873 AGCD01036133 MODEL 8943620 protein-coding Eno2 enolase 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); phosphopyruvate hydratase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); multicellular organismal reproductive process (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Atrophy (ortholog); brain disease (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955413 4498625 4506769 + 102006232 AGCD01013620;GBBH01088486;GBDF01119626;XM_005378839 XP_005378896 MODEL 9036784 protein-coding Ciita class II major histocompatibility complex transactivator ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to electrical stimulus (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Addison's disease (ortholog); Albuminuria (ortholog); FOUND IN cell surface (ortholog); nucleoplasm (ortholog); PML body (ortholog) NW_004955442 7600903 7647619 - 102006289 AGCD01037625;AGCD01037626;GBDK01084553;XM_013517881;XM_013517882;XM_013517883;XM_013517884;XM_013517886;XM_013517887;XM_013517888;XM_013517889;XM_013517890;XM_013517891;XM_013517892;XM_013517893;XM_013517894 XP_013373335;XP_013373336;XP_013373337;XP_013373338;XP_013373340;XP_013373341;XP_013373342;XP_013373343;XP_013373344;XP_013373345;XP_013373346;XP_013373347;XP_013373348 MODEL 39134041 misc_rna 7SK 7SK RNA 39132034 rrna 5S_rRNA 5S ribosomal RNA 8753505 protein-coding LOC102013528 olfactory receptor 8I2 NW_004955511 1030944 1031876 + 102013528 AGCD01066354;XM_005408222 XP_005408279 MODEL 8943569 protein-coding D2hgdh D-2-hydroxyglutarate dehydrogenase ENCODES a protein that exhibits (R)-2-hydroxyglutarate dehydrogenase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN lactate metabolic process (ortholog); malate metabolic process (ortholog); protein destabilization (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); amino acid metabolic disorder (ortholog); D-2-hydroxyglutaric aciduria (ortholog); FOUND IN mitochondrion (ortholog) NW_004955542 99379 130447 - 102003906 AGCD01071456;AGCD01071457;GBCE01077173;XM_005411112;XM_005411114;XM_013508084;XM_013508085;XM_013508086;XR_001232164 XP_005411169;XP_005411171;XP_013363538;XP_013363539;XP_013363540 MODEL 8786808 protein-coding Abtb3 ankyrin repeat and BTB domain containing 3 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN exploration behavior (ortholog); protein stabilization (ortholog); synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955405 41123136 41299803 + 102026939 AGCD01005541;AGCD01005542;AGCD01005543;AGCD01005544;AGCD01005545;AGCD01005546;GBBH01021992;XM_005374637;XM_005374638;XM_005374639 XP_005374694;XP_005374695;XP_005374696 MODEL 39131832 rrna 5S_rRNA 5S ribosomal RNA 8999055 protein-coding Dpysl4 dihydropyrimidinase like 4 ENCODES a protein that exhibits filamin binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN neuron development (ortholog) NW_004955477 9828766 9844975 + 102023692 AGCD01055686;GBCE01163259;XM_005402037 XP_005402094 MODEL 8754216 protein-coding LOC102015352 olfactory receptor 10G3 NW_004955550 2295101 2296367 - 102015352 AGCD01072621;XM_005412125 XP_005412182 MODEL 9068179 protein-coding Btbd16 BTB domain containing 16 ASSOCIATED WITH prostate cancer (ortholog) NW_004955477 560095 627017 + 102019167 AGCD01055492;GBDF01047392;XM_005401934;XM_013503026;XM_013503027 XP_005401991;XP_013358480;XP_013358481 MODEL 8729780 protein-coding LOC102020272 olfactory receptor 1044-like NW_004955511 1485460 1486416 + 102020272 AGCD01066369;XM_005408232 XP_005408289 MODEL 8714818 ncrna LOC102019251 uncharacterized LOC102019251 NW_004955409 23260141 23267863 - 102019251 AGCD01010059;GBBH01137462;XR_259787 MODEL 9013610 pseudo LOC102021752 histone acetyltransferase type B catalytic subunit pseudogene NW_004955471 1960041 1961237 - 102021752 AGCD01052994 MODEL 8782229 protein-coding LOC102016503 cytochrome b ascorbate-dependent protein 3 ENCODES a protein that exhibits transmembrane ascorbate ferrireductase activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955511 6191644 6200099 + 102016503 AGCD01066598;GBDF01121158;XM_005408161;XM_005408162 XP_005408218;XP_005408219 MODEL 9002324 protein-coding Il27ra interleukin 27 receptor subunit alpha ENCODES a protein that exhibits interleukin-27 receptor activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cellular extravasation (ortholog); negative regulation of interleukin-17 production (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); Immunodeficiency 134 (Epstein-Barr virus-specific) (ortholog); pneumoconiosis (ortholog) NW_004955415 32749682 32762532 + 102009171 AGCD01016732;GBBH01006488;XM_005381079;XM_005381080;XM_005381081;XM_005381082 XP_005381136;XP_005381137;XP_005381138;XP_005381139 MODEL 9031136 protein-coding LOC102010358 olfactory receptor 52H1-like NW_004955414 21638413 21639375 + 102010358 AGCD01015425;XM_005380101 XP_005380158 MODEL 8750346 protein-coding LOC102009639 BBSome-interacting protein 1-like NW_004955430 6423139 6423588 - 102009639 AGCD01029292;GBCC01033208;XM_005387391;XM_013515616 XP_005387448;XP_013371070 MODEL 39134344 misc_rna 7SK 7SK RNA 8955525 protein-coding Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ENCODES a protein that exhibits cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); cholesterol catabolic process (ortholog); liver regeneration (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH cholestasis (ortholog); congenital bile acid synthesis defect (ortholog); congenital bile acid synthesis defect 1 (ortholog); FOUND IN lipid droplet (ortholog) NW_004955493 7835160 7838428 + 102025133 AGCD01061229;GBCQ01033335;XM_005405287;XM_005405288 XP_005405344;XP_005405345 MODEL 9011051 pseudo LOC102011574 polyadenylate-binding protein 1 pseudogene NW_004955516 4984024 4988135 + 102011574 AGCD01067543 MODEL 8781804 protein-coding Ifng interferon gamma ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antigen processing and presentation (ortholog); apoptotic process (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acquired immunodeficiency syndrome (ortholog); acute disseminated encephalomyelitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955458 14643333 14648020 - 102028383 AGCD01047841;GBDJ01404961;XM_005397466 XP_005397523 MODEL 8865702 ncrna LOC102012752 uncharacterized LOC102012752 NW_004955469 10486414 10491430 - 102012752 AGCD01052535;GBCE01044034;XR_263446 MODEL 9030627 protein-coding Dpysl5 dihydropyrimidinase like 5 INVOLVED IN negative regulation of dendrite morphogenesis (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Dandy-Walker syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955469 8838167 8920991 + 102016693 AGCD01052482;GBDF01277137;XM_005400442;XM_005400443 XP_005400499;XP_005400500 MODEL 8838828 pseudo LOC102003793 R-spondin-3 pseudogene NW_004955514 156613 206653 - 102003793 AGCD01066997;AGCD01066998;AGCD01066999;AGCD01067000;AGCD01067001 MODEL 8794461 protein-coding CUNH16orf92 chromosome unknown C16orf92 homolog INVOLVED IN fertilization (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); lymphopenia (ortholog); neutropenia (ortholog) NW_004955493 6940226 6941290 - 102025918 AGCD01061149;GBDF01193215;XM_005405200 XP_005405257 MODEL 39134042 misc_rna 7SK 7SK RNA 8997263 ncrna LOC102009252 uncharacterized LOC102009252 NW_004955407 17252038 17275416 - 102009252 AGCD01007243;AGCD01007244;AGCD01007245;AGCD01007246;GBDF01238047;XR_001231027;XR_259564;XR_259565 MODEL 8760058 protein-coding Eno3 enolase 3 ENCODES a protein that exhibits identical protein binding (ortholog); phosphopyruvate hydratase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); response to xenobiotic stimulus (ortholog); skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); genetic disease (ortholog); Glycogen Storage Disease XIII (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955467 10363154 10368261 + 102021867 AGCD01051561;GBDF01119625;XM_005399622 XP_005399679 MODEL 8753907 protein-coding Cpne8 copine 8 NW_004955505 1360091 1551093 + 102004301 AGCD01064974;GBDK01142516;XM_005407109 XP_005407166 MODEL 9044096 protein-coding Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cardiac muscle cell action potential (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Andersen-Tawil syndrome (ortholog); Arsenic Poisoning (ortholog); atrial fibrillation (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955478 2734795 2745217 - 102021553 AGCD01055802;GBBH01082277;XM_005402099;XM_005402100 XP_005402156;XP_005402157 MODEL 8766278 pseudo LOC102008146 DNA damage-regulated autophagy modulator protein 1 pseudogene NW_004955536 576531 579612 - 102008146 AGCD01070732 MODEL 8841427 pseudo LOC102008875 phosducin-like protein 3 pseudogene NW_004955427 21601337 21602111 + 102008875 AGCD01027451 MODEL 8807441 protein-coding LOC102011983 cystatin-9-like NW_004955415 30490600 30492806 - 102011983 AGCD01016664;GBDF01134641;XM_013512168 XP_013367622 MODEL 8836408 pseudo LOC102020273 tripartite motif-containing protein 59-like NW_004955513 5722667 5726079 + 102020273 AGCD01066981 MODEL 8800190 protein-coding Erh ERH mRNA splicing and mitosis factor ENCODES a protein that exhibits methyl-CpG binding (ortholog); FOUND IN methylosome (ortholog); midbody (ortholog); nucleus (ortholog) NW_004955466 960245 976449 + 102027958 AGCD01050685;AGCD01050686;GBBH01031291;XM_005399034 XP_005399091 MODEL 9009913 pseudo LOC102020600 schwannomin-interacting protein 1 pseudogene NW_004955432 22769942 22770616 - 102020600 AGCD01031266 MODEL 8710866 protein-coding Ddx20 DEAD-box helicase 20 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955435 15209640 15219698 + 102028792 AGCD01033264;GBDF01003762;XM_005388953 XP_005389010 MODEL 8794011 ncrna LOC102011575 uncharacterized LOC102011575 NW_004955433 7112388 7165573 + 102011575 AGCD01031565;AGCD01031566;GBDF01115735;XR_001234705;XR_261564 MODEL 8779222 protein-coding LOC102014255 3-ketoacyl-CoA thiolase B, peroxisomal-like NW_004955421 4985856 4998119 - 102014255 AGCD01021709;AGCD01021710;GBCQ01008989;XM_005383729 XP_005383786 MODEL 9038065 protein-coding LOC102005611 bcl-2-like protein 13 NW_004955423 25019836 25046086 + 102005611 AGCD01024050;AGCD01024051;XM_013514366 XP_013369820 MODEL 39132035 rrna 5S_rRNA 5S ribosomal RNA 8799297 protein-coding Hsdl1 hydroxysteroid dehydrogenase like 1 ENCODES a protein that exhibits steroid dehydrogenase activity (ortholog); FOUND IN mitochondrion (ortholog) NW_004955564 155080 172712 + 102020063 AGCD01074188;GBDI01267692;XM_005413224;XM_005413226;XM_013509205 XP_005413281;XP_005413283;XP_013364659 MODEL 8754892 protein-coding Cilk1 ciliogenesis associated kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); intracellular signal transduction (ortholog); intraciliary anterograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); coloboma (ortholog); cranioectodermal dysplasia (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); ciliary tip (ortholog) NW_004955411 2997726 3065106 + 102013150 AGCD01011530;AGCD01011531;AGCD01011532;AGCD01011533;GBDI01025878;XM_005377612;XM_013510736;XM_013510737;XM_013510738;XM_013510739 XP_005377669;XP_013366190;XP_013366191;XP_013366192;XP_013366193 MODEL 8911397 protein-coding LOC102015749 uncharacterized LOC102015749 NW_004955506 1936669 1939131 + 102015749 AGCD01065277;GBDF01087684;XM_013505960 XP_013361414 MODEL 8877065 ncrna LOC102007728 uncharacterized LOC102007728 NW_004955405 808318 848689 - 102007728 AGCD01004585;AGCD01004586;AGCD01004587;AGCD01004588;GBDF01303416;XR_259358 MODEL 39131833 rrna 5S_rRNA 5S ribosomal RNA 9039213 protein-coding Dqx1 DEAQ-box RNA dependent ATPase 1 ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog) NW_004955424 11262502 11271680 + 102021686 AGCD01024559;GBDI01087364;XM_005385484;XM_005385485;XM_005385486;XR_261050 XP_005385541;XP_005385542;XP_005385543 MODEL 39133759 misc_rna 7SK 7SK RNA 8959169 protein-coding Daam1 dishevelled associated activator of morphogenesis 1 INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH epilepsy (ortholog); intrinsic cardiomyopathy (ortholog); FOUND IN ciliary basal body (ortholog); glutamatergic synapse (ortholog); motile cilium (ortholog) NW_004955466 12954557 13129483 + 102006889 AGCD01051147;AGCD01051148;AGCD01051149;AGCD01051150;GBDF01188476;XM_005399225;XM_005399226;XM_013521989;XM_013521990;XM_013521991 XP_005399282;XP_005399283;XP_013377443;XP_013377444;XP_013377445 MODEL 10177620 pseudo LOC106149942 uncharacterized LOC106149942 NW_004955458 4475421 4533274 - 106149942 AGCD01047416;AGCD01047417;AGCD01047418 MODEL 8948306 protein-coding Izumo2 IZUMO family member 2 NW_004955559 888457 894644 + 102017515 AGCD01073619;GBDF01222463;XM_013508945 XP_013364399 MODEL 8762388 pseudo LOC102021755 ras-related protein Rab-5A pseudogene NW_004955475 1653809 1654446 + 102021755 AGCD01054757 MODEL 9020705 ncrna LOC102008492 uncharacterized LOC102008492 NW_004955405 32452517 32475010 - 102008492 AGCD01005333;GBDJ01347641;XR_259420 MODEL 8857582 protein-coding Gpx4 glutathione peroxidase 4 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); identical protein binding (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); arachidonate metabolic process (ortholog); cerebellum development (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Binge Drinking (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nuclear envelope (ortholog) NW_004955495 6767969 6772256 - 102011883 AGCD01062090;AGCD01062091;AGCD01062092;GBDF01008530;XM_005405994 XP_005406051 MODEL 8962681 protein-coding Csnk1g3 casein kinase 1 gamma 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway NW_004955521 1660090 1721811 + 102012017 AGCD01068191;AGCD01068192;GBDJ01227979;XM_005409308;XM_005409309;XM_005409310;XM_005409311;XM_005409312;XM_005409314;XM_005409315;XM_005409316 XP_005409365;XP_005409366;XP_005409367;XP_005409368;XP_005409369;XP_005409371;XP_005409372;XP_005409373 MODEL 8807450 protein-coding Dhx36 DEAH-box helicase 36 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); catalytic activity, acting on a nucleic acid (ortholog); DNA helicase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to arsenite ion (ortholog); cellular response to heat (ortholog); FOUND IN axon (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955448 5634072 5676272 - 102012706 AGCD01041373;GBDJ01388906;XM_005393058;XM_013518656 XP_005393115;XP_013374110 MODEL 8926718 pseudo LOC102011145 protein salvador homolog 1 pseudogene NW_004955532 3962130 3963932 - 102011145 AGCD01070305 MODEL 8938032 ncrna LOC102003796 uncharacterized LOC102003796 NW_004955433 12458790 12516903 - 102003796 AGCD01031664;GBBH01126520;XR_001234747;XR_001234748;XR_001234749;XR_001234750;XR_001234751;XR_001234752;XR_261587 MODEL 8969001 protein-coding LOC102020993 uncharacterized protein C14orf53 homolog NW_004955466 3540104 3552592 - 102020993 AGCD01050796;GBDF01006032;XM_005399101;XM_013521948 XP_005399158;XP_013377402 MODEL 8838388 pseudo LOC102017642 thioredoxin pseudogene NW_004955465 2024398 2024702 - 102017642 AGCD01050347 MODEL 8960134 protein-coding Ifngr1 interferon gamma receptor 1 ENCODES a protein that exhibits type II interferon receptor activity (ortholog); INVOLVED IN astrocyte activation (ortholog); defense response to virus (ortholog); microglial cell activation (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH allergic disease (ortholog); arteriosclerosis (ortholog); asthma (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955436 22183318 22199013 + 102019637 AGCD01034087;GBCE01075143;XM_005389280 XP_005389337 MODEL 8791144 protein-coding LOC102012754 olfactory receptor 2D3-like NW_004955414 22588215 22589156 - 102012754 AGCD01015464;XM_005380509 XP_005380566 MODEL 9014495 protein-coding LOC102024494 chromosome unknown open reading frame, human C9orf153 NW_004955432 1362227 1386118 + 102024494 AGCD01030592;GBDF01124972;XM_005387917;XM_005387918;XM_005387920;XM_013515949 XP_005387974;XP_005387975;XP_005387977;XP_013371403 MODEL 8717372 pseudo LOC102015355 heat shock cognate 71 kDa protein pseudogene NW_004955444 12513405 12515314 - 102015355 AGCD01039075 MODEL 8942642 protein-coding Fbxw10b F-box and WD repeat domain containing 10B NW_004955467 2093067 2124507 + 102019583 AGCD01051300;AGCD01051301;AGCD01051302;GBDF01050485;XM_005399327;XM_005399328;XM_013522173 XP_005399384;XP_005399385;XP_013377627 MODEL 8812233 pseudo LOC102019253 grpE protein homolog 2, mitochondrial pseudogene NW_004955460 9887916 9888533 - 102019253 AGCD01048560 MODEL 39131834 rrna 5S_rRNA 5S ribosomal RNA 8799956 protein-coding LOC102016506 translation initiation factor IF-2-like NW_004955431 15410646 15417651 - 102016506 AGCD01030361;GBCQ01032182;XM_005387901 XP_005387958 MODEL 8918115 pseudo LOC102010366 regulator of nonsense transcripts 2 pseudogene NW_004955416 11225709 11227659 + 102010366 AGCD01017181 MODEL 8852583 protein-coding Btbd17 BTB domain containing 17 NW_004955553 1247702 1271777 - 102008771 AGCD01072873;AGCD01072874;AGCD01072875;AGCD01072876;GBCB01111017;XM_005412235;XM_013508637;XM_013508638 XP_005412292;XP_013364091;XP_013364092 MODEL 9029472 protein-coding LOC102013159 uncharacterized LOC102013159 NW_004955413 887408 905781 + 102013159 AGCD01013494;GBBH01011689;XM_013511285 XP_013366739 MODEL 39134345 misc_rna 7SK 7SK RNA 8749748 protein-coding Kcnj3 potassium inwardly rectifying channel subfamily J member 3 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN potassium ion import across plasma membrane (ortholog); response to electrical stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); inward rectifier potassium channel complex (ortholog) NW_004955440 19716081 19836957 + 102012129 AGCD01036643;AGCD01036644;AGCD01036645;GBBH01015925;XM_005390821;XM_005390822 XP_005390878;XP_005390879 MODEL 9029231 protein-coding Il2ra interleukin 2 receptor subunit alpha ENCODES a protein that exhibits interleukin-2 binding (ortholog); interleukin-2 receptor activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955421 22642004 22694729 - 102029977 AGCD01022143;AGCD01022144;AGCD01022145;AGCD01022146;GBDJ01194803;XM_005383859;XM_005383860;XM_013513633 XP_005383916;XP_005383917;XP_013369087 MODEL 10251171 pseudo LOC106149943 retinol dehydrogenase 16-like NW_004955458 4670971 4690548 - 106149943 AGCD01047425;AGCD01047426;AGCD01047427;AGCD01047428;AGCD01047429;AGCD01047430 MODEL 8702021 protein-coding Ankrd2 ankyrin repeat domain 2 ENCODES a protein that exhibits chromatin binding (ortholog); protein kinase B binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of myoblast differentiation (ortholog); negative regulation of myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955507 3678009 3686967 + 102028215 AGCD01065632;GBCQ01044645;XM_005407614;XR_264378 XP_005407671 MODEL 8900249 ncrna LOC102016134 uncharacterized LOC102016134 NW_004955409 940711 943540 + 102016134 AGCD01009168;GBBH01012462;XR_259742 MODEL 8749136 protein-coding Ehmt1 euchromatic histone lysine methyltransferase 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); histone H3K27 methyltransferase activity (ortholog); histone H3K9 dimethyltransferase activity (ortholog); INVOLVED IN beige fat cell differentiation (ortholog); brown fat cell differentiation (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autistic disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955513 5491446 5642559 + 102017487 AGCD01066974;AGCD01066975;AGCD01066976;AGCD01066977;AGCD01066978;AGCD01066979;GBDF01221034;XM_005408624;XM_005408625;XM_005408626;XM_005408627;XM_005408628;XM_005408629;XM_005408630;XM_005408631;XM_013506658 XP_005408681;XP_005408682;XP_005408683;XP_005408684;XP_005408685;XP_005408686;XP_005408687;XP_005408688;XP_013362112 MODEL 8849915 ncrna LOC102011577 uncharacterized LOC102011577 NW_004955521 1595235 1596832 - 102011577 AGCD01068190;GBDF01280804;XR_264603 MODEL 39134043 misc_rna 7SK 7SK RNA 8943241 protein-coding LOC102011150 uncharacterized LOC102011150 NW_004955440 3381418 3382941 - 102011150 AGCD01036241;GBDF01052510;XM_005390767;XM_013517492 XP_005390824;XP_013372946 MODEL 39132036 rrna 5S_rRNA 5S ribosomal RNA 8760503 protein-coding LOC102009253 keratin-associated protein 20-2-like NW_004955407 30214295 30214462 + 102009253 AGCD01007628;XM_005375647 XP_005375704 MODEL 8736878 protein-coding LOC102015752 olfactory receptor 8H1-like NW_004955511 1182402 1183361 + 102015752 AGCD01066359;XM_005408226 XP_005408283 MODEL 9005465 protein-coding LOC102008878 olfactory receptor 5AN1-like NW_004955511 3869171 3870109 + 102008878 AGCD01066479;XM_005408266 XP_005408323 MODEL 8978301 protein-coding LOC102008154 fMet-Leu-Phe receptor NW_004955558 805352 810836 + 102008154 AGCD01073392;GBDK01070147;XM_005412671 XP_005412728 MODEL 8883672 protein-coding LOC102005616 cytochrome P450 2C18-like NW_004955507 1041847 1146933 + 102005616 AGCD01065501;AGCD01065502;AGCD01065503;AGCD01065504;AGCD01065505;AGCD01065506;AGCD01065507;AGCD01065508;AGCD01065509;AGCD01065510;AGCD01065511;AGCD01065512;AGCD01065513;AGCD01065514;AGCD01065515;AGCD01065516;GBDF01111538;XM_013506232 XP_013361686 MODEL 8995804 protein-coding Ifngr2 interferon gamma receptor 2 ENCODES a protein that exhibits type II interferon receptor activity (ortholog); INVOLVED IN defense response to virus (ortholog); microglial cell activation (ortholog); positive regulation of glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); allergic asthma (ortholog); congenital heart disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955407 32846927 32863155 + 102015925 AGCD01007685;GBCB01022004;GBDK01022293;XM_013504273 XP_013359727 MODEL 39133760 misc_rna 7SK 7SK RNA 8903454 protein-coding LOC102009640 olfactory receptor 10AG1-like NW_004955511 857241 858197 - 102009640 AGCD01066345;XM_013506363 XP_013361817 MODEL 8920972 protein-coding LOC102015754 spermatogenesis-associated protein 31E1-like NW_004955515 2468254 2473814 - 102015754 AGCD01067250;GBDF01046133;XM_005408874 XP_005408931 MODEL 8703909 ncrna LOC102014659 uncharacterized LOC102014659 NW_004955469 8587811 8588814 - 102014659 AGCD01052476;GBDF01187430;XR_263440 MODEL 8726779 protein-coding Acaa2 acetyl-CoA acyltransferase 2 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); acetyl-CoA C-acyltransferase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to hypoxia (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); basal cell carcinoma (ortholog); osteoarthritis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955402 34857317 34885169 - 102014845 AGCD01000872;AGCD01000873;GBDJ01085210;XM_005372912;XM_013510632 XP_005372969;XP_013366086 MODEL 8797503 protein-coding Eri1 exoribonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); histone pre-mRNA stem-loop binding (ortholog); ribosome binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); maturation of 5.8S rRNA (ortholog); rRNA 3'-end processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH amenorrhea (ortholog); Developmental Disabilities (ortholog); Hoxha-Aliu syndrome (ortholog); FOUND IN cytoplasm (ortholog); histone pre-mRNA 3'end processing complex (ortholog); nucleolus (ortholog) NW_004955463 5074921 5104341 + 102006224 AGCD01049629;AGCD01049630;AGCD01049631;AGCD01049632;GBBH01198207;XM_013521560 XP_013377014 MODEL 8829047 ncrna LOC102020601 uncharacterized LOC102020601 NW_004955524 1966728 1975410 + 102020601 AGCD01068789;GBDJ01164716;XR_001231956 MODEL 8929770 protein-coding Ddx21 DExD-box helicase 21 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of myeloid dendritic cell cytokine production (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955437 22050029 22071213 - 102027231 AGCD01034927;GBDI01113648;XM_005390100 XP_005390157 MODEL 8996269 pseudo LOC102003803 calmodulin-like NW_004955437 19660488 19661153 + 102003803 AGCD01034865 MODEL 9048436 protein-coding Hsdl2 hydroxysteroid dehydrogenase like 2 ENCODES a protein that exhibits steroid dehydrogenase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955419 14899141 14974449 - 102004390 AGCD01020046;AGCD01020047;AGCD01020048;AGCD01020049;AGCD01020050;AGCD01020051;AGCD01020052;AGCD01020053;GBCQ01004568;XM_005382705;XM_013513304 XP_005382762;XP_013368758 MODEL 8993542 pseudo LOC102013875 40S ribosomal protein S2 pseudogene NW_004955440 4357399 4360937 - 102013875 AGCD01036261;AGCD01036262 MODEL 8995918 ncrna LOC102017644 uncharacterized LOC102017644 NW_004955412 23698957 23719026 - 102017644 AGCD01013092;GBDF01274071;XR_001232911;XR_001232912;XR_001232913;XR_001232914;XR_001232915 MODEL 9045982 pseudo LOC102011985 mitochondrial import inner membrane translocase subunit Tim8 B pseudogene NW_004955416 17979253 17979575 - 102011985 AGCD01017393 MODEL 8782936 pseudo LOC102015357 MOB-like protein phocein pseudogene NW_004955446 16623486 16624592 + 102015357 AGCD01040340 MODEL 39132037 rrna 5S_rRNA 5S ribosomal RNA 8870140 protein-coding Daam2 dishevelled associated activator of morphogenesis 2 INVOLVED IN determination of left/right symmetry (ortholog); dorsal spinal cord development (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); nephrotic syndrome type 24 (ortholog); osteoporosis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955437 6728703 6839903 + 102030565 AGCD01034443;AGCD01034444;GBDI01353991;XM_005389656;XM_005389657;XM_013516989;XM_013516990 XP_005389713;XP_005389714;XP_013372443;XP_013372444 MODEL 8969626 protein-coding Izumo3 IZUMO family member 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); FOUND IN inner acrosomal membrane (ortholog) NW_004955472 9923831 9958452 + 102019691 AGCD01053699;GBDF01207349;XM_005401190 XP_005401247 MODEL 8794655 ncrna LOC102010368 uncharacterized LOC102010368 NW_004955417 26506352 26519514 - 102010368 AGCD01018512;AGCD01018513;GBDJ01093566;XR_001233419;XR_001233420;XR_001233421 MODEL 8812029 pseudo LOC102013163 olfactory receptor 52B4-like NW_004955414 20049525 20050458 + 102013163 AGCD01015354 MODEL 8906530 protein-coding Gpx7 glutathione peroxidase 7 ENCODES a protein that exhibits catalase activity (ortholog); peroxidase activity (ortholog); ASSOCIATED WITH Barrett's adenocarcinoma (ortholog); Barrett's esophagus (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955464 6560198 6566763 - 102017106 AGCD01050031;AGCD01050032;GBCE01067129;XM_005398574 XP_005398631 MODEL 39133761 misc_rna 7SK 7SK RNA 8856161 ncrna LOC102014256 uncharacterized LOC102014256 NW_004955421 27341522 27382472 - 102014256 AGCD01022282;GBDJ01081484;XR_001233846;XR_001233847;XR_001233848 MODEL 8861464 protein-coding Dhx37 DEAH-box helicase 37 ENCODES a protein that exhibits U3 snoRNA binding (ortholog); INVOLVED IN brain development (ortholog); positive regulation of male gonad development (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Anorchia (ortholog); coloboma of optic nerve (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleolus (ortholog) NW_004955482 4733720 4754754 + 102008853 AGCD01057307;AGCD01057308;GBCE01154824;XM_005403001 XP_005403058 MODEL 9025000 protein-coding Kcnj4 potassium inwardly rectifying channel subfamily J member 4 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH lung adenocarcinoma (ortholog); Nerve Degeneration (ortholog); Parkinson's disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955413 24605887 24634524 - 102018276 AGCD01014372;AGCD01014373;GBDF01055412;XM_005379253;XM_005379254;XM_005379255;XM_005379256;XM_005379257 XP_005379310;XP_005379311;XP_005379312;XP_005379313;XP_005379314 MODEL 9052322 protein-coding Eno4 enolase 4 ENCODES a protein that exhibits phosphopyruvate hydratase activity (ortholog); INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); glycolytic process (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955431 21625808 21650282 + 102024713 AGCD01030496;GBCE01181692;XM_005387856;XM_005387858;XM_005387859 XP_005387913;XP_005387915;XP_005387916 MODEL 9014587 protein-coding Cpne9 copine family member 9 INVOLVED IN positive regulation of dendrite extension (ortholog) NW_004955561 1238916 1258000 + 102005519 AGCD01073844;GBDI01105631;XM_005413020;XM_013509080 XP_005413077;XP_013364534 MODEL 8961768 protein-coding Cilp cartilage intermediate layer protein ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); dinucleotide phosphatase activity (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of insulin-like growth factor receptor signaling pathway (ortholog); negative regulation of SMAD protein signal transduction (ortholog); ASSOCIATED WITH Intervertebral Disc Disease (ortholog); osteoarthritis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) NW_004955450 10231082 10244632 + 102008046 AGCD01042609;GBDF01251243;XM_005393721 XP_005393778 MODEL 8879409 protein-coding LOC102007735 uncharacterized LOC102007735 NW_004955455 3711041 3735232 - 102007735 AGCD01045648;XM_005396209;XR_001236266 XP_005396266 MODEL 8890908 protein-coding LOC102024496 zinc finger protein 709-like NW_004955432 4600161 4605984 + 102024496 AGCD01030730;AGCD01030731;GBDF01262659;XM_013515925 XP_013371379 MODEL 8925658 protein-coding Dr1 down-regulator of transcription 1 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); TBP-class protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN ATAC complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955423 1262633 1281870 - 102015735 AGCD01023430;AGCD01023431;GBDK01135300;XM_005385020 XP_005385077 MODEL 8823528 pseudo LOC102020274 dnaJ homolog subfamily A member 1-like NW_004955432 22754012 22756732 - 102020274 AGCD01031266 MODEL 8984713 ncrna LOC102013534 uncharacterized LOC102013534 NW_004955434 16255649 16273655 - 102013534 AGCD01032521;AGCD01032522;AGCD01032523;AGCD01032524;GBDF01288452;XR_261620 MODEL 9054450 protein-coding LOC102020603 zinc finger protein 791-like NW_004955524 105801 127235 + 102020603 AGCD01068664;AGCD01068665;GBCQ01143020;XM_013507338;XM_013507339;XM_013507340 XP_013362792;XP_013362793;XP_013362794 MODEL 39131835 rrna 5S_rRNA 5S ribosomal RNA 8988487 pseudo LOC102019256 R3H and coiled-coil domain-containing protein 1-like NW_004955413 632082 634543 - 102019256 AGCD01013482 MODEL 39134346 misc_rna 7SK 7SK RNA 8705787 protein-coding CUNH16orf96 chromosome unknown C16orf96 homolog NW_004955442 12834662 12879308 - 102009323 AGCD01037747;AGCD01037748;GBDK01184197;XM_005391288;XM_005391289;XM_013517721;XM_013517722 XP_005391345;XP_005391346;XP_013373175;XP_013373176 MODEL 8908579 protein-coding Csnk2a1 casein kinase 2 alpha 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); kinase activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); DNA damage response (ortholog); double-strand break repair (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955597 326601 397112 - 102022145 AGCD01076554;AGCD01076555;AGCD01076556;GBBH01087974;XM_005414727 XP_005414784 MODEL 8700975 protein-coding LOC102005618 UPF0061 protein ETA_18310-like NW_004955429 2822671 2866918 + 102005618 AGCD01028439;AGCD01028440;AGCD01028441;AGCD01028442;AGCD01028443;GBBH01006669;GBCQ01067969;XM_005386894 XP_005386951 MODEL 8957169 protein-coding LOC102008496 glutathione S-transferase theta-1 NW_004955455 8324748 8336051 - 102008496 AGCD01045886;AGCD01045887;GBDI01296088;XM_005396409 XP_005396466 MODEL 10359836 protein-coding Btbd18 BTB domain containing 18 INVOLVED IN male meiosis I (ortholog); piRNA transcription (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) NW_004955511 2641848 2647679 - 106146243 AGCD01066422;XM_013506440 XP_013361894 MODEL 8756415 protein-coding Ankrd22 ankyrin repeat domain 22 INVOLVED IN calcium ion import (ortholog); cell population proliferation (ortholog); immune response (ortholog) NW_004955425 4123004 4149484 + 102020463 AGCD01025310;GBDK01380102;XM_013514893 XP_013370347 MODEL 9015361 protein-coding LOC102020994 ovostatin-like NW_004955413 5795329 5861153 + 102020994 AGCD01013695;GBBH01125441;XM_005378886 XP_005378943 MODEL 9047547 protein-coding LOC102014660 olfactory receptor 51G2-like NW_004955414 20092094 20093047 + 102014660 AGCD01015357;XM_005380046 XP_005380103 MODEL 39134044 misc_rna 7SK 7SK RNA 8996982 protein-coding Ehmt2 euchromatic histone lysine methyltransferase 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); H1-4K26 methyltransferase activity (ortholog); histone H3K27 methyltransferase activity (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to cocaine (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alopecia areata (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955437 396736 411144 - 102003800 AGCD01034129;GBCE01187461;GBCQ01066738;XM_005389393;XM_005389394;XM_013516776;XM_013516777 XP_005389450;XP_005389451;XP_013372230;XP_013372231 MODEL 8829137 protein-coding Acaca acetyl-CoA carboxylase alpha ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to prostaglandin E stimulus (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; Leigh disease pathway; malonic aciduria pathway; ASSOCIATED WITH Acetyl-Coa Carboxylase Deficiency (ortholog); atherosclerosis (ortholog); congestive heart failure (ortholog); FOUND IN cytosol (ortholog) NW_004955451 679033 909892 + 102024295 AGCD01042950;AGCD01042951;AGCD01042952;AGCD01042953;AGCD01042954;GBCQ01129882;GBDF01277014;XM_013519172 XP_013374626 MODEL 8820164 pseudo LOC102003804 thyrotropin-releasing hormone receptor-like NW_004955541 2505471 2509425 - 102003804 AGCD01071413 MODEL 9064039 protein-coding LOC102021758 tubulin polyglutamylase TTLL13 NW_004955416 15080728 15102506 - 102021758 AGCD01017299;AGCD01017300;GBDI01167579;XM_005381529;XM_013512473;XM_013512474 XP_005381586;XP_013367927;XP_013367928 MODEL 8811918 pseudo LOC102008879 protein kinase C iota type pseudogene NW_004955430 16780162 16781452 + 102008879 AGCD01029645 MODEL 8883812 ncrna LOC102009257 uncharacterized LOC102009257 NW_004955460 11538025 11540811 + 102009257 AGCD01048633;GBDF01077791;XR_263059 MODEL 9016921 protein-coding Cpo carboxypeptidase O ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); FOUND IN plasma membrane (ortholog) NW_004955457 8011414 8038758 - 102026834 AGCD01046900;XM_005397114 XP_005397171 MODEL 8818003 pseudo LOC102011989 F-actin-capping protein subunit alpha-1 pseudogene NW_004955481 9008939 9010077 - 102011989 AGCD01057092 MODEL 8846529 protein-coding Cilp2 cartilage intermediate layer protein 2 ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); dinucleotide phosphatase activity (ortholog) NW_004955524 2414502 2421166 - 102014822 AGCD01068817;GBDJ01042634;XM_005409640 XP_005409697 MODEL 8960935 protein-coding Ifnk interferon kappa ENCODES a protein that exhibits type I interferon receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); regulation of DNA-templated transcription (ortholog); response to virus (ortholog) NW_004955472 7359453 7360055 - 102023465 AGCD01053621;XM_005415249 XP_005415306 MODEL 9059601 pseudo LOC102024497 translocation protein SEC62 pseudogene NW_004955518 4379872 4381320 + 102024497 AGCD01067828 MODEL 8945117 pseudo LOC102009643 tubulin alpha-1C chain-like NW_004955515 4374447 4376136 + 102009643 AGCD01067319 MODEL 10319509 protein-coding LOC106149944 UPF0317 protein KRH_21160-like NW_004955458 9381874 9396866 + 106149944 AGCD01047640;GBCE01061454;XM_013520806 XP_013376260 MODEL 39134347 misc_rna 7SK 7SK RNA 8885455 protein-coding CUNH17orf100 chromosome unknown C17orf100 homolog NW_004955467 12155309 12158762 + 102007101 AGCD01051625;GBDF01156145;XM_005399667;XM_005399668 XP_005399724;XP_005399725 MODEL 8813745 protein-coding Izumo4 IZUMO family member 4 NW_004955495 6014852 6018342 - 102019821 AGCD01062046;GBDF01001768;XM_005405931;XM_013505262;XM_013505263;XM_013505264;XM_013505265;XM_013505266;XM_013505267;XR_001231371 XP_005405988;XP_013360716;XP_013360717;XP_013360718;XP_013360719;XP_013360720;XP_013360721 MODEL 8967925 protein-coding Eri2 ERI1 exoribonuclease family member 2 ASSOCIATED WITH COVID-19 (ortholog) NW_004955493 96758 103669 - 102029981 AGCD01060838;GBCC01027768;XM_005405034;XM_013504827 XP_005405091;XP_013360281 MODEL 39133762 misc_rna 7SK 7SK RNA 8984501 protein-coding Ddx23 DEAD-box helicase 23 ENCODES a protein that exhibits helicase activity (ortholog); INVOLVED IN R-loop processing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH complex cortical dysplasia with other brain malformations 14B (ortholog); Failure to Thrive (ortholog); Fetal Growth Retardation (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); nucleolus (ortholog) NW_004955500 7685954 7698880 - 102008435 AGCD01063940;AGCD01063941;GBCE01056276;XM_005406669;XM_005406670;XM_013505643 XP_005406726;XP_005406727;XP_013361097 MODEL 8793424 protein-coding Gpx8 glutathione peroxidase 8 (putative) ENCODES a protein that exhibits peroxidase activity (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955446 12498276 12504890 - 102019865 AGCD01040235;GBCE01042647;XM_005392706;XM_005392707;XM_013518459 XP_005392763;XP_005392764;XP_013373913 MODEL 8735154 pseudo LOC102016511 60S ribosomal protein L6-like NW_004955434 16492140 16499177 + 102016511 AGCD01032530 MODEL 9031813 protein-coding LOC102013879 olfactory receptor 4N5-like NW_004955550 250120 251046 - 102013879 AGCD01072489;GBBH01106105;XM_005412029 XP_005412086 MODEL 8904982 pseudo LOC102007740 39S ribosomal protein L47, mitochondrial pseudogene NW_004955459 7511838 7512274 + 102007740 AGCD01048113 MODEL 8889286 protein-coding Fbxw11 F-box and WD repeat domain containing 11 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of non-canonical NF-kappaB signal transduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of circadian rhythm (ortholog); PARTICIPATES IN Hedgehog signaling pathway; mTOR signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH NEURODEVELOPMENTAL, JAW, EYE, AND DIGITAL SYNDROME (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 24703477 24834522 - 102023436 AGCD01008621;AGCD01008622;AGCD01008623;AGCD01008624;AGCD01008625;GBDF01162905;XM_005376332;XM_013509313;XM_013509316 XP_005376389;XP_013364767;XP_013364770 MODEL 8929450 protein-coding LOC102014662 zinc finger protein 431-like NW_004955414 22862309 22868912 - 102014662 AGCD01015481;AGCD01015482;GBDF01274079;XM_013512082 XP_013367536 MODEL 8812616 protein-coding LOC102008157 vomeronasal type-2 receptor 116-like NW_004955563 100634 120790 - 102008157 AGCD01074043;AGCD01074044;AGCD01074045;AGCD01074046;GBDF01162776;XM_013509122 XP_013364576 MODEL 8951949 protein-coding Il2rb interleukin 2 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-15-mediated signaling pathway (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); Animal Toxoplasmosis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955413 23623567 23640245 - 102028734 AGCD01014333;GBDI01139428;XM_005379192 XP_005379249 MODEL 9068082 protein-coding LOC102010369 galectin-9-like NW_004955481 5706510 5744393 - 102010369 AGCD01057000;AGCD01057001;AGCD01057002;GBCE01150879;XM_013503348;XM_013503349 XP_013358802;XP_013358803 MODEL 8889872 ncrna LOC102015755 uncharacterized LOC102015755 NW_004955517 1389838 1403846 - 102015755 AGCD01067597;GBCQ01153942;XR_001231819;XR_264541;XR_264542 MODEL 8757276 ncrna LOC102005620 uncharacterized LOC102005620 NW_004955430 3876763 3953407 + 102005620 AGCD01029230;AGCD01029231;AGCD01029232;AGCD01029233;AGCD01029234;AGCD01029235;AGCD01029236;AGCD01029237;AGCD01029238;AGCD01029239;GBDF01177758;XR_001234564;XR_261415 MODEL 8800610 protein-coding Cpox coproporphyrinogen oxidase ENCODES a protein that exhibits coproporphyrinogen oxidase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); heme biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); Experimental Arthritis (ortholog); genetic disease (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955427 152397 163570 - 102011341 AGCD01026808;AGCD01026809;GBCE01044947;GBCQ01096156;XM_005386600 XP_005386657 MODEL 8968885 protein-coding LOC102013165 vomeronasal type-1 receptor 90-like NW_004955414 15050578 15051507 - 102013165 AGCD01015173;XM_005380443 XP_005380500 MODEL 8878856 protein-coding LOC102014258 mortality factor 4-like protein 1 NW_004955422 14066167 14067136 + 102014258 AGCD01022848;XM_013513833 XP_013369287 MODEL 8878773 protein-coding LOC102012761 peroxisomal bifunctional enzyme-like NW_004955420 22249148 22292098 + 102012761 AGCD01021191;AGCD01021192;AGCD01021193;GBBH01217378;XM_005383300 XP_005383357 MODEL 9021381 protein-coding Dhx38 DEAH-box helicase 38 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); retinitis pigmentosa 84 (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog) NW_004955484 4752834 4770843 + 102018097 AGCD01058232;GBDF01223379;XM_005403530 XP_005403587 MODEL 8816156 protein-coding Hsf1 heat shock transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to angiotensin (ortholog); cellular response to cadmium ion (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Cardiomegaly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955454 2907265 2932352 + 102029701 AGCD01045039;AGCD01045040;GBCE01074728;XM_005395870;XM_005395871;XM_005395872;XM_005395873;XM_005395874;XM_005395875;XM_005395876;XM_005395877;XM_013520098 XP_005395927;XP_005395928;XP_005395929;XP_005395930;XP_005395931;XP_005395932;XP_005395933;XP_005395934;XP_013375552 MODEL 8868661 protein-coding Btbd19 BTB domain containing 19 NW_004955464 13401388 13416924 - 102008074 AGCD01050274;AGCD01050275;GBDJ01381390;XM_005398728;XM_005398729;XM_005398730;XM_013521629 XP_005398785;XP_005398786;XP_005398787;XP_013377083 MODEL 8972678 protein-coding LOC102021000 olfactory receptor 51G1 NW_004955414 20531113 20532078 - 102021000 AGCD01015379;XM_005380061 XP_005380118 MODEL 9036126 protein-coding LOC102013536 uncharacterized LOC102013536 NW_004955526 4264331 4315647 - 102013536 AGCD01069364;AGCD01069365;GBDJ01399642;XM_013507356 XP_013362810 MODEL 8702178 ncrna LOC102003807 uncharacterized LOC102003807 NW_004955546 1036841 1042659 - 102003807 AGCD01072038;GBDF01208163;XR_264887 MODEL 8794174 protein-coding Eri3 ERI1 exoribonuclease family member 3 NW_004955464 13855581 13984598 + 102017107 AGCD01050294;AGCD01050295;AGCD01050296;AGCD01050297;AGCD01050298;GBBH01114559;XM_005398762;XM_005398764;XM_013521692;XM_013521693;XM_013521694;XM_013521696;XM_013521697 XP_005398819;XP_005398821;XP_013377146;XP_013377147;XP_013377148;XP_013377150;XP_013377151 MODEL 8729190 pseudo LOC102020277 vomeronasal type-2 receptor 116-like NW_004955524 1976769 1977741 + 102020277 AGCD01068789;XM_005409480 MODEL 39131836 rrna 5S_rRNA 5S ribosomal RNA 8753075 pseudo LOC102016141 protein kinase C iota type pseudogene NW_004955410 8891170 8892515 - 102016141 AGCD01010753 MODEL 8865035 protein-coding LOC102015362 HLA class I histocompatibility antigen, B-42 alpha chain-like NW_004955583 535928 554579 + 102015362 AGCD01075834;AGCD01075835;AGCD01075836;GBDK01001510;XM_005414306 XP_005414363 MODEL 9055831 protein-coding LOC102019258 uncharacterized LOC102019258 NW_004955413 23007320 23038825 - 102019258 AGCD01014323;AGCD01014324;GBDK01319843;XM_013511689;XR_001233057;XR_001233058;XR_001233059;XR_001233060;XR_260095 XP_013367143 MODEL 8981436 protein-coding Acacb acetyl-CoA carboxylase beta ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); D-glucose import across plasma membrane (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); Cardiac Fibrosis (ortholog); FOUND IN mitochondrial fatty acid beta-oxidation multienzyme complex (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955455 10282308 10427439 + 102002995 AGCD01045951;AGCD01045952;AGCD01045953;AGCD01045954;AGCD01045955;AGCD01045956;GBDF01086406;XM_005396484;XM_013520458;XM_013520459;XM_013520460;XM_013520461 XP_005396541;XP_013375912;XP_013375913;XP_013375914;XP_013375915 MODEL 8991085 protein-coding Dab1 DAB adaptor protein 1 ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration (ortholog); cerebellum structural organization (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Peters anomaly (ortholog); spastic ataxia (ortholog); FOUND IN apical part of cell (ortholog); brush border (ortholog); cytoplasm (ortholog) NW_004955464 2325529 2721497 + 102019784 AGCD01049964;AGCD01049965;GBDI01207950;XM_013521740;XM_013521741;XM_013521743;XM_013521744;XM_013521745 XP_013377194;XP_013377195;XP_013377197;XP_013377198;XP_013377199 MODEL 8786262 protein-coding LOC102011152 serine protease 29-like NW_004955442 15971410 15973505 + 102011152 AGCD01037889;XM_005391589 XP_005391646 MODEL 8730818 protein-coding LOC102011991 olfactory receptor 5V1-like NW_004955418 30227847 30228797 + 102011991 AGCD01019507;XM_005382370 XP_005382427 MODEL 9039309 protein-coding LOC102024500 vomeronasal type-2 receptor 116-like NW_004955524 669389 691978 + 102024500 AGCD01068689;AGCD01068690;AGCD01068691;XM_013507232 XP_013362686 MODEL 8934619 protein-coding Csnk2a2 casein kinase 2 alpha 2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); double-strand break repair (ortholog); liver regeneration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH male infertility (ortholog); Oxygen-Induced Retinopathy (ortholog); Skin Neoplasms (ortholog); FOUND IN acrosomal vesicle (ortholog); chromatin (ortholog); nucleus (ortholog) NW_004955433 15677788 15718894 - 102010938 AGCD01031761;AGCD01031762;GBBH01031942;GBDJ01352606;XM_005388434 XP_005388491 MODEL 39134348 misc_rna 7SK 7SK RNA 10302046 protein-coding LOC106149945 coiled-coil domain-containing protein 86-like NW_004955458 10689606 10703839 + 106149945 AGCD01047701;GBCQ01086243;XM_013520807 XP_013376261 MODEL 8972470 protein-coding Kcnj5 potassium inwardly rectifying channel subfamily J member 5 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization (ortholog); INVOLVED IN membrane repolarization during atrial cardiac muscle cell action potential (ortholog); potassium ion import across plasma membrane (ortholog); regulation of heart rate by cardiac conduction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH adenoma (ortholog); Andersen-Tawil syndrome (ortholog); atrial fibrillation (ortholog); FOUND IN external side of plasma membrane (ortholog); inward rectifier potassium channel complex (ortholog); T-tubule (ortholog) NW_004955412 29850097 29874213 + 102015392 AGCD01013287;GBCQ01140795;XM_005378542;XM_005378543 XP_005378599;XP_005378600 MODEL 8765502 protein-coding Enoph1 enolase-phosphatase 1 ENCODES a protein that exhibits acireductone synthase activity (ortholog); INVOLVED IN L-methionine salvage from methylthioadenosine (ortholog); ASSOCIATED WITH pneumoconiosis (ortholog) NW_004955433 6522663 6549352 + 102006942 AGCD01031540;AGCD01031541;GBBH01186039;GBDI01188550;XM_005388244 XP_005388301 MODEL 9011629 protein-coding LOC102005621 olfactory receptor 5B3-like NW_004955511 3197583 3200113 - 102005621 AGCD01066448;XM_013506384 XP_013361838 MODEL 39132038 rrna 5S_rRNA 5S ribosomal RNA 8794779 ncrna LOC102016526 uncharacterized LOC102016526 NW_004955443 17482051 17497508 + 102016526 AGCD01038579;GBDF01277180;XR_262212 MODEL 8912398 protein-coding Dram1 DNA damage regulated autophagy modulator 1 INVOLVED IN cellular response to oxygen-glucose deprivation (ortholog); mitophagy (ortholog); regulation of autophagy (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog) NW_004955405 37153847 37170007 + 102029038 AGCD01005444;GBDK01132997;XM_005374560;XM_013518732 XP_005374617;XP_013374186 MODEL 8883780 protein-coding Gramd1a GRAM domain containing 1A ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); intracellular cholesterol transport (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog); organelle membrane contact site (ortholog) NW_004955468 4347387 4371096 + 102008933 AGCD01051906;AGCD01051907;GBDI01110549;XM_005400014;XM_005400015;XM_005400016;XM_013522359;XM_013522360;XM_013522361;XM_013522362;XM_013522363 XP_005400071;XP_005400072;XP_005400073;XP_013377813;XP_013377814;XP_013377815;XP_013377816;XP_013377817 MODEL 8705137 ncrna LOC102014663 uncharacterized LOC102014663 NW_004955474 2353119 2366287 - 102014663 AGCD01054289;AGCD01054290;AGCD01054291;GBDF01295636;XR_001230725;XR_001230727;XR_001230728;XR_001230729;XR_001230730 MODEL 9008055 protein-coding LOC102021762 uncharacterized LOC102021762 NW_004955417 27505855 27508890 + 102021762 AGCD01018558;GBDF01146423;XM_005381948;XM_005381949;XM_005381950 XP_005382005;XP_005382006;XP_005382007 MODEL 8794280 protein-coding LOC102020606 HLA class II histocompatibility antigen, DRB1-11 beta chain-like NW_004955437 1262182 1269983 - 102020606 AGCD01034198;GBDJ01238235;XM_005389452 XP_005389509 MODEL 10111127 pseudo LOC102021001 Ig heavy chain V-I region 5-like NW_004955470 817793 818334 - 102021001 AGCD01052624 MODEL 8707916 protein-coding LOC102011579 pancreatic alpha-amylase NW_004955435 7974418 8023066 + 102011579 AGCD01032983;AGCD01032984;AGCD01032985;AGCD01032986;AGCD01032987;AGCD01032988;AGCD01032989;GBDK01013521;XM_005388812;XM_013516505;XM_013516506 XP_005388869;XP_013371959;XP_013371960 MODEL 8824622 pseudo LOC102009644 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955516 2584233 2584809 - 102009644 AGCD01067462 MODEL 8871221 pseudo LOC102010370 tax1-binding protein 1 homolog NW_004955418 30088883 30095400 + 102010370 AGCD01019503 MODEL 8864367 protein-coding Ankrd23 ankyrin repeat domain 23 ENCODES a protein that exhibits titin binding (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); regulation of sarcomere organization (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); diastolic heart failure (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN I band (ortholog); intercalated disc (ortholog); myofibril (ortholog) NW_004955470 4195872 4200979 - 102023252 AGCD01052728;GBDI01118906;XM_005400683 XP_005400740 MODEL 8925140 protein-coding CUNH17orf107 chromosome unknown C17orf107 homolog ASSOCIATED WITH congenital myasthenic syndrome (ortholog) NW_004955467 10313693 10314724 + 102020788 AGCD01051558;GBDF01005267;XM_005399618 XP_005399675 MODEL 8864150 pseudo LOC102017645 cyclin-G1 pseudogene NW_004955466 9212833 9213709 + 102017645 AGCD01051031 MODEL 39133763 misc_rna 7SK 7SK RNA 8762905 ncrna LOC102013168 uncharacterized LOC102013168 NW_004955415 32943857 32949925 - 102013168 AGCD01016743;GBDF01193091;XR_260338 MODEL 8976092 protein-coding Ddx24 DEAD-box helicase 24 PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog) NW_004955438 16100345 16116377 - 102011698 AGCD01035395;GBCB01039889;XM_005390365 XP_005390422 MODEL 9026176 pseudo LOC102013888 protein AF1q-like NW_004955588 224254 224784 + 102013888 AGCD01076095 MODEL 8837074 protein-coding Ei24 EI24 autophagy associated transmembrane protein ENCODES a protein that exhibits importin-alpha family protein binding (ortholog); INVOLVED IN autophagy (ortholog); cellular response to UV-C (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955412 26574814 26586154 + 102021428 AGCD01013199;AGCD01013200;GBCQ01039359;XM_005378462 XP_005378519 MODEL 8878591 pseudo LOC102008880 10 kDa heat shock protein, mitochondrial pseudogene NW_004955512 3112785 3135884 - 102008880 AGCD01066696 MODEL 8701664 ncrna LOC102009258 uncharacterized LOC102009258 NW_004955410 7298409 7299909 + 102009258 AGCD01010712;GBDK01133796;XR_259823;XR_259824 MODEL 8825629 protein-coding LOC102008160 zinc finger protein 709-like NW_004955569 1635173 1644301 + 102008160 AGCD01074673;GBDF01011195;XM_005413505 XP_005413562 MODEL 8727392 protein-coding LOC102007742 probable C-mannosyltransferase DPY19L2 NW_004955460 7871421 7960495 + 102007742 AGCD01048500;AGCD01048501;AGCD01048502;AGCD01048503;AGCD01048504;AGCD01048505;AGCD01048506;AGCD01048507;AGCD01048508;GBDF01196111;XM_013521290;XM_013521291;XM_013521292 XP_013376744;XP_013376745;XP_013376746 MODEL 39131838 rrna 5S_rRNA 5S ribosomal RNA 9004427 ncrna LOC102003811 uncharacterized LOC102003811 NW_004955442 15113086 15113646 + 102003811 AGCD01037859;GBBH01035320;XR_262150 MODEL 8954999 protein-coding Ifnlr1 interferon lambda receptor 1 INVOLVED IN defense response to virus (ortholog); mucosal immune response (ortholog); positive regulation of cellular respiration (ortholog); ASSOCIATED WITH psoriasis (ortholog); FOUND IN interleukin-28 receptor complex (ortholog) NW_004955452 4002389 4028193 - 102026180 AGCD01043962;AGCD01043963;GBCE01169046;XM_013519716;XM_013519717 XP_013375170;XP_013375171 MODEL 9066802 protein-coding Il2rg interleukin 2 receptor subunit gamma ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular homeostasis (ortholog); interleukin-15-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH combined immunodeficiency (ortholog); combined T cell and B cell immunodeficiency (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955475 10676592 10680565 - 102028412 AGCD01055108;AGCD01055109;GBBH01142524;GBDI01064080;XM_013502895 XP_013358349 MODEL 8807516 protein-coding LOC102015757 acyl-coenzyme A thioesterase 4 NW_004955523 1778663 1781028 - 102015757 AGCD01068542;GBBH01187375;XM_013507141;XM_013507142 XP_013362595;XP_013362596 MODEL 8842639 protein-coding LOC102020279 vomeronasal type-2 receptor 116-like NW_004955524 4032543 4049377 - 102020279 AGCD01068944;AGCD01068945;XM_013507203 XP_013362657 MODEL 39134045 misc_rna 7SK 7SK RNA 8703413 protein-coding Acad10 acyl-CoA dehydrogenase family member 10 FOUND IN mitochondrion (ortholog) NW_004955482 8282530 8327511 + 102028967 AGCD01057515;GBDF01160099;XM_005403170;XM_013503680;XM_013503681;XM_013503682;XM_013503683 XP_005403227;XP_013359134;XP_013359135;XP_013359136;XP_013359137 MODEL 8777760 ncrna LOC102014263 uncharacterized LOC102014263 NW_004955425 3158459 3207750 - 102014263 AGCD01025281;AGCD01025282;GBDF01056331;XR_261122 MODEL 8991975 protein-coding Cpped1 calcineurin like phosphoesterase domain containing 1 FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955442 5898055 6023384 + 102022637 AGCD01037573;AGCD01037574;AGCD01037575;AGCD01037576;AGCD01037577;GBDF01120047;XM_005391148 XP_005391205 MODEL 8805276 protein-coding LOC102020280 ubiquitin-conjugating enzyme E2 D2-like NW_004955525 2077744 2078537 - 102020280 AGCD01069075;GBDF01157835;XM_005409731;XM_005409732 XP_005409788;XP_005409789 MODEL 8992308 ncrna LOC102005624 uncharacterized LOC102005624 NW_004955518 1052939 1058556 - 102005624 AGCD01067755;GBDF01055606;XR_001231850;XR_264561;XR_264562 MODEL 8724600 protein-coding LOC102008498 interferon-induced GTP-binding protein Mx2-like NW_004955407 35275551 35296838 - 102008498 AGCD01007736;GBBH01139527;XM_005375727;XM_013504510 XP_005375784;XP_013359964 MODEL 9058032 protein-coding Kcnj6 potassium inwardly rectifying channel subfamily J member 6 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); G-protein alpha-subunit binding (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to morphine (ortholog); response to electrical stimulus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Down syndrome (ortholog); heroin dependence (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955407 36670824 36923960 - 102017538 AGCD01007773;AGCD01007774;AGCD01007775;AGCD01007776;XM_005375756 XP_005375813 MODEL 8981863 gene LOC102016150 Ig heavy chain V-I region 5-like NW_004955470 291223 294846 - 102016150 AGCD01052609;XM_005400818 MODEL 8896653 protein-coding LOC102019261 taste receptor type 2 member 10-like NW_004955413 6981018 6981974 + 102019261 AGCD01013788;XM_005379615 XP_005379672 MODEL 8930747 pseudo LOC102021766 ribosome biogenesis protein BRX1 homolog NW_004955418 2267162 2269572 + 102021766 AGCD01018753 MODEL 8864885 ncrna LOC102011996 uncharacterized LOC102011996 NW_004955421 24720574 24725193 + 102011996 AGCD01022221;GBDI01347519;XR_260825 MODEL 8836173 protein-coding Dab2 DAB adaptor protein 2 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); cargo receptor activity (ortholog); clathrin binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); metabolic acidosis (ortholog); FOUND IN apical plasma membrane (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) NW_004955426 23852752 23883030 - 102010924 AGCD01026658;AGCD01026659;GBBH01006783;GBCE01028917;XM_013514991 XP_013370445 MODEL 8714139 protein-coding LOC102017650 Fc receptor-like protein 3 NW_004955468 9539939 9611259 - 102017650 AGCD01052049;AGCD01052050;GBDI01278495;XM_005400124;XM_005400128;XM_013522495;XM_013522496;XM_013522497 XP_005400181;XP_005400185;XP_013377949;XP_013377950;XP_013377951 MODEL 39134349 misc_rna 7SK 7SK RNA 8975743 pseudo LOC102024501 protein DBF4 homolog A-like NW_004955435 9744623 9748017 + 102024501 AGCD01033062;AGCD01033063 MODEL 8867593 protein-coding Gramd1b GRAM domain containing 1B ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); cholesterol homeostasis (ortholog); lysosome to ER cholesterol transport (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955412 24212412 24387798 + 102022064 AGCD01013110;AGCD01013111;AGCD01013112;GBCQ01037515;XM_005378386;XM_005378387;XM_005378389;XM_005378390;XM_005378391;XM_013511136;XM_013511137;XM_013511138;XM_013511139;XM_013511140;XM_013511142 XP_005378443;XP_005378444;XP_005378446;XP_005378447;XP_005378448;XP_013366590;XP_013366591;XP_013366592;XP_013366593;XP_013366594;XP_013366596 MODEL 8781826 protein-coding Jade1 jade family PHD finger 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K16 acetyltransferase activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of cell cycle (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955428 12762629 12835310 - 102028776 AGCD01027933;AGCD01027934;AGCD01027935;GBDK01233591;XM_005386724;XM_005386725;XM_005386726;XM_005386727;XM_005386728;XM_005386729;XM_005386730;XM_005386731;XM_013515275 XP_005386781;XP_005386782;XP_005386783;XP_005386784;XP_005386785;XP_005386786;XP_005386787;XP_005386788;XP_013370729 MODEL 8932508 protein-coding Csnk2b casein kinase 2 beta ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); endothelial tube morphogenesis (ortholog); liver regeneration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); FOUND IN cell projection (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955437 210541 215725 + 102018972 AGCD01034111;GBDF01007324;XM_005389349;XM_005389350 XP_005389406;XP_005389407 MODEL 8724873 protein-coding CUNH17orf50 chromosome unknown C17orf50 homolog FOUND IN nucleoplasm (ortholog) NW_004955481 10202477 10206606 + 102018728 AGCD01057138;GBDK01256624;XM_005402884 XP_005402941 MODEL 8830249 protein-coding Fbxw2 F-box and WD repeat domain containing 2 FOUND IN cytoplasm (ortholog) NW_004955419 7237472 7264482 + 102025797 AGCD01019875;AGCD01019876;GBDK01132156;XM_005382596;XM_013513235;XM_013513236 XP_005382653;XP_013368689;XP_013368690 MODEL 8977147 protein-coding Hsf2 heat shock transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955436 4387498 4406719 + 102021592 AGCD01033662;AGCD01033663;GBCB01002460;GBDF01005455;XM_013516603;XM_013516604;XM_013516605;XM_013516606;XM_013516607;XM_013516608;XM_013516609 XP_013372057;XP_013372058;XP_013372059;XP_013372060;XP_013372061;XP_013372062;XP_013372063 MODEL 10095784 protein-coding LOC106149946 translation initiation factor IF-2-like NW_004955458 11157507 11161567 + 106149946 AGCD01047725;GBCQ01140813;GBDI01088795;XM_013520808 XP_013376262 MODEL 8827526 protein-coding Enosf1 enolase superfamily member 1 ENCODES a protein that exhibits L-fuconate dehydratase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN carbohydrate catabolic process (ortholog); ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN mitochondrion (ortholog) NW_004955402 9266198 9297897 + 102023212 AGCD01000211;AGCD01000212;GBBH01158568;XM_005372673;XM_013519244;XM_013519282;XM_013519332;XM_013519378;XM_013519436;XM_013519451;XM_013519472;XM_013519499;XM_013519540 XP_005372730;XP_013374698;XP_013374736;XP_013374786;XP_013374832;XP_013374890;XP_013374905;XP_013374926;XP_013374953;XP_013374994 MODEL 39134350 misc_rna 7SK 7SK RNA 8873737 ncrna LOC102016528 uncharacterized LOC102016528 NW_004955444 4244420 4281393 - 102016528 AGCD01038808;AGCD01038809;AGCD01038810;GBDF01193897;XR_001235496;XR_262239 MODEL 9021535 protein-coding Erich1 glutamate rich 1 NW_004955403 58508113 58580682 + 102024638 AGCD01003183;AGCD01003184;AGCD01003185;AGCD01003186;GBCQ01178907;GBDJ01117475;XM_013515049 XP_013370503 MODEL 8717195 ncrna LOC102008881 uncharacterized LOC102008881 NW_004955520 1038221 1056799 - 102008881 AGCD01068041;AGCD01068042;GBDF01278076;XR_264581 MODEL 8983037 ncrna LOC102014665 uncharacterized LOC102014665 NW_004955416 19363203 19368313 - 102014665 AGCD01017422;XR_260395 MODEL 8957681 protein-coding Ddx25 DEAD-box helicase 25 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); regulation of translation (ortholog); spermatid development (ortholog); ASSOCIATED WITH azoospermia (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 26952655 26973758 + 102027281 AGCD01013224;AGCD01013225;GBDF01007483;XM_005378483;XR_260027 XP_005378540 MODEL 9062573 protein-coding Dram2 DNA damage regulated autophagy modulator 2 INVOLVED IN cell population proliferation (ortholog); photoreceptor cell maintenance (ortholog); regulation of autophagy (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); cone-rod dystrophy 21 (ortholog); fundus dystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955435 14664292 14704198 - 102022735 AGCD01033246;AGCD01033247;AGCD01033248;AGCD01033249;GBDJ01271409;XM_005388938;XM_005388939 XP_005388995;XP_005388996 MODEL 8838137 ncrna LOC102011155 uncharacterized LOC102011155 NW_004955446 10576607 10593188 + 102011155 AGCD01040183;GBDF01235922;XR_262391 MODEL 8912743 ncrna LOC102007747 uncharacterized LOC102007747 NW_004955462 12097970 12113964 + 102007747 AGCD01049397;GBDF01234407;XR_263131 MODEL 8968137 pseudo LOC102008500 serine/threonine-protein phosphatase 4 regulatory subunit 2-like NW_004955407 23016972 23161621 + 102008500 AGCD01007411;AGCD01007412;AGCD01007413;AGCD01007414;AGCD01007415 MODEL 9027751 ncrna LOC102012771 uncharacterized LOC102012771 NW_004955422 26067668 26092884 - 102012771 AGCD01023274;AGCD01023275;GBDI01368464;XR_260916 MODEL 8789680 pseudo LOC102003813 small nuclear ribonucleoprotein Sm D2 pseudogene NW_004955561 1082911 1083548 - 102003813 AGCD01073830 MODEL 8816539 pseudo LOC102009646 60S ribosomal protein L39 pseudogene NW_004955520 1114140 1114853 + 102009646 AGCD01068043;XM_005409228 MODEL 39134046 misc_rna 7SK 7SK RNA 8794173 pseudo LOC102016152 structural maintenance of chromosomes protein 3 pseudogene NW_004955472 2694507 2698195 - 102016152 AGCD01053485;AGCD01053486 MODEL 9032439 protein-coding Dhx40 DEAH-box helicase 40 NW_004955451 3456993 3500310 - 102014728 AGCD01043054;AGCD01043055;AGCD01043056;GBDK01430829;XM_005393985 XP_005394042 MODEL 8964917 pseudo LOC102011998 derlin-1 pseudogene NW_004955422 13345152 13349677 + 102011998 AGCD01022821 MODEL 8909719 pseudo LOC102013537 coiled-coil domain-containing protein 90B, mitochondrial pseudogene NW_004955533 59109 60126 - 102013537 AGCD01070311 MODEL 8806577 protein-coding Ankrd24 ankyrin repeat domain 24 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); FOUND IN plasma membrane (ortholog); stereocilium (ortholog) NW_004955495 4621059 4636235 - 102012553 AGCD01061937;AGCD01061938;GBDF01115379;XM_013505209;XM_013505210;XM_013505211;XM_013505212 XP_013360663;XP_013360664;XP_013360665;XP_013360666 MODEL 9008797 pseudo LOC102013170 clusterin-associated protein 1 pseudogene NW_004955477 8594751 8596230 - 102013170 AGCD01055648 MODEL 8828677 protein-coding Cimap1a ciliary microtubule associated protein 1A INVOLVED IN flagellated sperm motility (ortholog); FOUND IN outer dense fiber (ortholog); sperm flagellum (ortholog) NW_004955476 11837758 11841059 - 102003540 AGCD01055475;GBDF01002675;XM_005401892;XM_013502917 XP_005401949;XP_013358371 MODEL 39133764 misc_rna 7SK 7SK RNA 8791834 protein-coding Eid1 EP300 interacting inhibitor of differentiation 1 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Mesothelioma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955409 5066042 5067747 - 102010555 AGCD01009307;GBBH01031729;XM_005376696 XP_005376753 MODEL 8869407 protein-coding Cpq carboxypeptidase Q ENCODES a protein that exhibits metallodipeptidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN peptide catabolic process (ortholog); proteolysis (ortholog); thyroid hormone generation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955417 12585829 13020935 + 102006661 AGCD01018162;AGCD01018163;AGCD01018164;AGCD01018165;AGCD01018166;AGCD01018167;AGCD01018168;AGCD01018169;AGCD01018170;AGCD01018171;GBBH01063334;XM_005381836;XM_005381837 XP_005381893;XP_005381894 MODEL 8745521 ncrna LOC102009260 uncharacterized LOC102009260 NW_004955463 9987660 9990965 - 102009260 AGCD01049803;GBDF01112751;XR_263165 MODEL 8974935 pseudo LOC102020607 rho guanine nucleotide exchange factor 7 pseudogene NW_004955537 2763934 2772232 - 102020607 AGCD01070938 MODEL 10099518 protein-coding LOC106149947 inner nuclear membrane protein Man1-like NW_004955458 11883317 11883667 + 106149947 AGCD01047762;GBDF01076502;XM_013520809 XP_013376263 MODEL 8703254 pseudo LOC102020282 serine/threonine-protein kinase N2-like NW_004955529 1397769 1402834 + 102020282 AGCD01069683 MODEL 8827415 pseudo LOC102021003 interferon alpha-4-like NW_004955472 12811695 12814849 - 102021003 AGCD01053817;XM_005401193 MODEL 39131839 rrna 5S_rRNA 5S ribosomal RNA 8739851 protein-coding Il31 interleukin 31 ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); oncostatin-M receptor binding (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); FOUND IN extracellular space (ortholog) NW_004955482 6387289 6389361 + 102029864 AGCD01057390;GBDF01063375;XM_005403253 XP_005403310 MODEL 39132039 rrna 5S_rRNA 5S ribosomal RNA 8799354 ncrna LOC102021009 uncharacterized LOC102021009 NW_004955417 16272290 16298511 + 102021009 AGCD01018256;AGCD01018257;GBDF01075035;XR_260479 MODEL 8913596 protein-coding Kcnj8 potassium inwardly rectifying channel subfamily J member 8 ENCODES a protein that exhibits ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN action potential (ortholog); adaptive immune response (ortholog); apoptotic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 1 (ortholog); coronary artery disease (ortholog); FOUND IN glutamatergic synapse (ortholog); inward rectifying potassium channel (ortholog); myofibril (ortholog) NW_004955413 17364447 17371255 - 102019257 AGCD01014149;GBCE01075130;GBCQ01127914;XM_005379065 XP_005379122 MODEL 8916717 protein-coding Ifrd1 interferon related developmental regulator 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); glial cell proliferation (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Charcot-Marie-Tooth disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955410 16176431 16222006 + 102015613 AGCD01010950;AGCD01010951;GBDK01098501;XM_005377320;XM_013510565;XM_013510566;XM_013510567 XP_005377377;XP_013366019;XP_013366020;XP_013366021 MODEL 9032666 pseudo LOC102024503 probable ribosome biogenesis protein RLP24 pseudogene NW_004955534 1615395 1615936 - 102024503 AGCD01070504 MODEL 9021239 protein-coding Dab2ip DAB2 interacting protein ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); death receptor binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell motility involved in cerebral cortex radial glia guided migration (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); atherosclerosis (ortholog); carotid artery occlusion (ortholog); FOUND IN AIP1-IRE1 complex (ortholog); axon (ortholog); cerebellar mossy fiber (ortholog) NW_004955419 6229437 6416619 - 102011992 AGCD01019852;AGCD01019853;AGCD01019854;AGCD01019855;AGCD01019856;AGCD01019857;AGCD01019858;GBDF01128674;XM_005382543;XM_005382544;XM_005382545;XM_005382546;XM_005382549;XM_005382553;XM_005382554;XM_005382555;XM_013513228 XP_005382600;XP_005382601;XP_005382602;XP_005382603;XP_005382606;XP_005382610;XP_005382611;XP_005382612;XP_013368682 MODEL 8814453 ncrna LOC102013892 uncharacterized LOC102013892 NW_004955592 626798 629024 - 102013892 AGCD01076320;GBCC01000850;XR_265141 MODEL 9033798 ncrna LOC102009650 uncharacterized LOC102009650 NW_004955537 1976715 1992245 - 102009650 AGCD01070909;GBDJ01200201;XR_001232066;XR_001232067;XR_001232068;XR_264772 MODEL 8701935 protein-coding Cspg4 chondroitin sulfate proteoglycan 4 ENCODES a protein that exhibits collagen binding (ortholog); coreceptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN glial cell migration (ortholog); intracellular signal transduction (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autistic disorder (ortholog); basal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog); ruffle (ortholog) NW_004955450 2631310 2663118 + 102025198 AGCD01042392;AGCD01042393;GBCE01123444;XM_005393500 XP_005393557 MODEL 8705883 ncrna LOC102011583 uncharacterized LOC102011583 NW_004955436 8909255 8926076 + 102011583 AGCD01033752;AGCD01033753;AGCD01033754;GBDI01265317;XR_001234994;XR_261775;XR_261776 MODEL 39134351 misc_rna 7SK 7SK RNA 8812861 pseudo LOC102016541 heat shock cognate 71 kDa protein-like NW_004955402 44401794 44403967 + 102016541 AGCD01001113;XR_259086 MODEL 8777466 protein-coding Cimap1b ciliary microtubule associated protein 1B ASSOCIATED WITH polycystic ovary syndrome (ortholog) NW_004955413 33509185 33511002 - 102005246 AGCD01014673;GBDI01020034;XM_005379583;XM_013511512 XP_005379640;XP_013366966 MODEL 8720435 ncrna LOC102010374 uncharacterized LOC102010374 NW_004955487 1473174 1486730 + 102010374 AGCD01059246;GBDF01209774;XR_263982 MODEL 8763827 ncrna LOC102015771 uncharacterized LOC102015771 NW_004955439 4407806 4419003 + 102015771 AGCD01035709;GBBH01021909;XR_261971 MODEL 9020238 ncrna LOC102021768 uncharacterized LOC102021768 NW_004955484 9693663 9696787 + 102021768 AGCD01058425;GBDF01223320;XR_263900 MODEL 8867796 pseudo LOC102017656 phosphatase and actin regulator 2 pseudogene NW_004955475 5638964 5641638 - 102017656 AGCD01054924 MODEL 8916579 pseudo LOC102007751 olfactory receptor 147-like NW_004955412 25290203 25291080 + 102007751 AGCD01013143 MODEL 8966086 pseudo LOC102014264 ribosome biogenesis protein BRX1 homolog NW_004955502 5831939 5852642 + 102014264 AGCD01064380 MODEL 8738656 protein-coding Drap1 DR1 associated protein 1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955422 19406106 19408232 - 102023611 AGCD01023005;GBDF01043362;XM_005384442 XP_005384499 MODEL 8815129 pseudo LOC102015364 ornithine decarboxylase antizyme 1 pseudogene NW_004955402 7185465 7186381 + 102015364 AGCD01000167 MODEL 8922190 protein-coding Gramd1c GRAM domain containing 1C ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog); plasma membrane (ortholog) NW_004955427 13957746 14044473 + 102007253 AGCD01027262;AGCD01027263;AGCD01027264;GBDF01249293;XM_005386407 XP_005386464 MODEL 8996270 ncrna LOC102003814 uncharacterized LOC102003814 NW_004955444 9445917 9463729 - 102003814 AGCD01038970;GBDF01128007;XR_262253;XR_262254 MODEL 8706351 ncrna LOC102005629 uncharacterized LOC102005629 NW_004955526 3115354 3136784 + 102005629 AGCD01069328;XR_264659 MODEL 8998739 protein-coding LOC102008162 uncharacterized protein KIAA1211 NW_004955447 14674162 14715780 - 102008162 AGCD01041019;AGCD01041020;GBBH01097866;GBDI01055287;XM_013518481 XP_013373935 MODEL 9054396 protein-coding Fbxw4 F-box and WD repeat domain containing 4 INVOLVED IN cartilage development (ortholog); embryonic digit morphogenesis (ortholog); limb development (ortholog); ASSOCIATED WITH split hand-foot malformation (ortholog); split hand-foot malformation 3 (ortholog) NW_004955485 8584836 8688416 + 102017667 AGCD01058723;AGCD01058724;GBBH01142165;GBCB01024724;XM_005403932;XM_013504092;XM_013504093;XM_013504094;XM_013504095;XM_013504096;XM_013504097;XM_013504098;XM_013504100;XR_001231089 XP_005403989;XP_013359546;XP_013359547;XP_013359548;XP_013359549;XP_013359550;XP_013359551;XP_013359552;XP_013359554 MODEL 8708601 protein-coding Jade2 jade family PHD finger 2 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K16 acetyltransferase activity (ortholog); INVOLVED IN neuron projection extension (ortholog); positive regulation of neurogenesis (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955408 5676590 5722726 + 102017198 AGCD01008148;AGCD01008149;AGCD01008150;GBCQ01121630;XM_005376152;XM_005376153;XM_005376155;XM_005376156;XM_005376157 XP_005376209;XP_005376210;XP_005376212;XP_005376213;XP_005376214 MODEL 9019379 protein-coding LOC102013545 olfactory receptor 12-like NW_004955542 1216378 1219233 - 102013545 AGCD01071494;AGCD01071495;XM_005411243 XP_005411300 MODEL 8860854 protein-coding LOC102013897 type 2 lactosamine alpha-2,3-sialyltransferase NW_004956238 417 2786 + 102013897 AGCD01079299;GBCE01084662;GBDI01291305;XM_005415184 XP_005415241 MODEL 8723359 pseudo LOC102011156 glutathione S-transferase alpha-3 pseudogene NW_004955446 4760282 4767429 + 102011156 AGCD01040045 MODEL 9049610 ncrna LOC102009262 uncharacterized LOC102009262 NW_004955411 32414637 32423545 - 102009262 AGCD01012315;AGCD01012316;AGCD01012317;GBCQ01032791;XR_001232824;XR_259951 MODEL 8985341 protein-coding Cspg5 chondroitin sulfate proteoglycan 5 INVOLVED IN axon regeneration (ortholog); cytoskeleton organization (ortholog); glial cell projection elongation (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955420 24735155 24746580 + 102005267 AGCD01021330;GBBH01026157;GBCB01038512;XM_013513391;XM_013513392 XP_013368845;XP_013368846 MODEL 8800101 protein-coding Btbd2 BTB domain containing 2 ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN P-body (ortholog) NW_004955495 6072112 6085180 + 102022403 AGCD01062049;AGCD01062050;GBBH01062338;GBDF01084039;XM_005405935 XP_005405992 MODEL 10372417 ncrna LOC106149948 uncharacterized LOC106149948 NW_004955458 3788482 3798974 + 106149948 AGCD01047345;AGCD01047346;AGCD01047347;GBCE01168228;XR_001236438 MODEL 8884003 protein-coding LOC102016159 uncharacterized LOC102016159 NW_004955416 16349780 16351627 - 102016159 AGCD01017352;GBDI01352072;XM_013512424 XP_013367878 MODEL 39134047 misc_rna 7SK 7SK RNA 8733087 protein-coding CUNH17orf67 chromosome unknown C17orf67 homolog NW_004955451 6003689 6020435 + 102014102 AGCD01043195;AGCD01043196;AGCD01043197;GBCE01007112;XM_005394072 XP_005394129 MODEL 8894742 protein-coding Il31ra interleukin 31 receptor A ENCODES a protein that exhibits cytokine binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); defense response to other organism (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); primary cutaneous amyloidosis (ortholog); primary localized cutaneous amyloidosis 2 (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955446 11857882 11963867 - 102014507 AGCD01040215;AGCD01040216;AGCD01040217;AGCD01040218;AGCD01040219;AGCD01040220;GBDK01269090;XM_005392690;XM_005392691;XM_013518468 XP_005392747;XP_005392748;XP_013373922 MODEL 8864559 protein-coding Hsf2bp heat shock transcription factor 2 binding protein INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH primary ovarian insufficiency 19 (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog) NW_004955407 38577463 38671929 + 102030600 AGCD01007809;AGCD01007810;GBDF01038954;XM_013504957;XM_013504964;XM_013504972;XM_013504978 XP_013360411;XP_013360418;XP_013360426;XP_013360432 MODEL 8733739 ncrna LOC102013171 uncharacterized LOC102013171 NW_004955481 5717841 5719119 - 102013171 AGCD01057001;XR_263783 MODEL 8962445 protein-coding Ankrd27 ankyrin repeat domain 27 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); SNARE binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); endosome to melanosome transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH eosinophilic esophagitis (ortholog); FOUND IN early endosome (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955468 5314779 5364925 + 102003111 AGCD01051963;AGCD01051964;GBCB01041034;XM_013522443;XM_013522444;XM_013522445;XM_013522446;XM_013522447 XP_013377897;XP_013377898;XP_013377899;XP_013377900;XP_013377901 MODEL 39133765 misc_rna 7SK 7SK RNA 8713968 protein-coding Draxin dorsal inhibitory axon guidance protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); axon guidance (ortholog); commissural neuron differentiation in spinal cord (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Parkinson's disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 2161927 2185230 - 102008420 AGCD01058992;AGCD01058993;GBDF01260547;XM_013504311;XM_013504312 XP_013359765;XP_013359766 MODEL 8741107 protein-coding LOC102019266 translation initiation factor IF-2-like NW_004955414 19651075 19652661 + 102019266 AGCD01015327;GBCB01111580;GBDK01347780;XM_013511755 XP_013367209 MODEL 9025431 protein-coding LOC102021770 arylacetamide deacetylase-like 4 NW_004955486 1044485 1053799 + 102021770 AGCD01058918;GBCC01033407;XM_005403942;XM_005403943 XP_005403999;XP_005404000 MODEL 9062926 pseudo LOC102009651 synaptonemal complex protein 3-like NW_004955437 1319326 1320146 - 102009651 AGCD01034204 MODEL 8964186 protein-coding LOC102014666 cytochrome b-c1 complex subunit 7 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH depressive disorder (ortholog); inherited metabolic disorder (ortholog); mitochondrial complex III deficiency nuclear type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955417 12225505 12232944 - 102014666 AGCD01018156;AGCD01018157;GBCB01104622;XM_013512701 XP_013368155 MODEL 8769669 ncrna LOC102011584 uncharacterized LOC102011584 NW_004955436 18651414 18692957 + 102011584 AGCD01033976;AGCD01033977;AGCD01033978;GBDF01154303;XR_001234938;XR_001234939 MODEL 8974021 protein-coding Eid2 EP300 interacting inhibitor of differentiation 2 ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955468 29927 32947 + 102012945 AGCD01051675;AGCD01051676;GBCQ01164995;XM_005400282 XP_005400339 MODEL 8978307 ncrna LOC102008501 uncharacterized LOC102008501 NW_004955457 7028448 7038296 + 102008501 AGCD01046864;GBCB01099923;XR_262927 MODEL 8813586 protein-coding LOC102013178 olfactory receptor 4C46-like NW_004955422 151671 152600 + 102013178 AGCD01022395;XM_005383938 XP_005383995 MODEL 39131840 rrna 5S_rRNA 5S ribosomal RNA 9032996 pseudo LOC102010378 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955422 11267452 11268307 - 102010378 AGCD01022753 MODEL 8716228 protein-coding LOC102012773 fatty acid-binding protein, liver NW_004955424 624397 629958 + 102012773 AGCD01024188;GBCQ01000092;XM_005385381 XP_005385438 MODEL 9059247 pseudo LOC102009264 mitochondrial import inner membrane translocase subunit Tim9 pseudogene NW_004955412 19546401 19547571 - 102009264 AGCD01012960 MODEL 8925021 pseudo LOC102014268 dnaJ homolog subfamily A member 1 pseudogene NW_004955428 10510547 10511683 - 102014268 AGCD01027868 MODEL 9012517 ncrna LOC102012000 uncharacterized LOC102012000 NW_004955423 27287604 27301513 + 102012000 AGCD01024120;AGCD01024121;GBCE01127032;XR_001234059 MODEL 8934673 protein-coding Dhx57 DExH-box helicase 57 NW_004955441 6479107 6541281 - 102013552 AGCD01036924;AGCD01036925;AGCD01036926;AGCD01036927;AGCD01036928;AGCD01036929;GBDF01113897;XM_005390897 XP_005390954 MODEL 9051494 protein-coding LOC102021015 histone H2B type 1-B NW_004955483 971317 979330 + 102021015 AGCD01057638;XM_005403309 XP_005403366 MODEL 8719535 protein-coding Erich2 glutamate rich 2 NW_004955449 4013473 4040524 - 102023213 AGCD01041872;GBBH01000968;XM_005393243;XM_013518737;XM_013518738;XM_013518739;XM_013518740;XM_013518741;XM_013518742;XM_013518743 XP_005393300;XP_013374191;XP_013374192;XP_013374193;XP_013374194;XP_013374195;XP_013374196;XP_013374197 MODEL 8741484 ncrna LOC102008892 uncharacterized LOC102008892 NW_004955439 2679785 2686659 - 102008892 AGCD01035657;GBDF01185074;XR_261968 MODEL 8778449 protein-coding LOC102015366 spermatid-specific linker histone H1-like protein NW_004955451 11494164 11495023 + 102015366 AGCD01043355;GBDF01003862;XM_005394178 XP_005394235 MODEL 8983783 protein-coding Enox1 ecto-NOX disulfide-thiol exchanger 1 ENCODES a protein that exhibits NADH dehydrogenase activity (ortholog); protein disulfide isomerase activity (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955518 1124556 1677025 - 102006270 AGCD01067756;AGCD01067757;AGCD01067758;AGCD01067759;AGCD01067760;AGCD01067761;AGCD01067762;GBDF01088322;XM_005409058;XM_005409064;XM_005409068;XM_005409071;XM_013506963;XM_013506964;XM_013506965;XM_013506966;XM_013506967 XP_005409115;XP_005409121;XP_005409125;XP_005409128;XP_013362417;XP_013362418;XP_013362419;XP_013362420;XP_013362421 MODEL 8777303 protein-coding Dach1 dachshund family transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell population proliferation (ortholog); development of primary female sexual characteristics (ortholog); negative regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955404 34739780 35118037 + 102026936 AGCD01004105;AGCD01004106;AGCD01004107;AGCD01004108;AGCD01004109;AGCD01004110;AGCD01004111;AGCD01004112;AGCD01004113;AGCD01004114;AGCD01004115;AGCD01004116;GBDK01421830;XM_013516960 XP_013372414 MODEL 8999943 protein-coding CUNH17orf78 chromosome unknown C17orf78 homolog NW_004955451 617281 645926 - 102025643 AGCD01042942;AGCD01042943;AGCD01042944;AGCD01042945;AGCD01042946;AGCD01042947;GBDF01065478;XM_005393931;XM_005393932;XM_013519174;XM_013519175 XP_005393988;XP_005393989;XP_013374628;XP_013374629 MODEL 39134352 misc_rna 7SK 7SK RNA 8730276 protein-coding LOC102016543 uncharacterized LOC102016543 NW_004955604 157552 165981 + 102016543 AGCD01076865;AGCD01076866;GBBH01212518;XM_013510085 XP_013365539 MODEL 8896106 protein-coding Fbxw5 F-box and WD repeat domain containing 5 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); regulation of centrosome duplication (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955513 4993161 4996922 - 102027775 AGCD01066949;GBDF01002330;XM_005408567;XM_005408568 XP_005408624;XP_005408625 MODEL 8848266 protein-coding Hsf4 heat shock transcription factor 4 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell development (ortholog); eye development (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 5 multiple types (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog) NW_004955484 9447641 9452784 - 102015203 AGCD01058415;GBDI01355509;XM_005403696;XM_005403697;XM_013503959 XP_005403753;XP_005403754;XP_013359413 MODEL 8777752 protein-coding LOC102013898 uncharacterized LOC102013898 NW_004955451 15016843 15022852 - 102013898 AGCD01043592;AGCD01043593;GBDI01270044;XM_013519357;XM_013519358;XR_001235980 XP_013374811;XP_013374812 MODEL 8735330 ncrna LOC102024506 uncharacterized LOC102024506 NW_004955540 1866085 1875395 - 102024506 AGCD01071308;GBCE01172657;XR_264820 MODEL 9056289 pseudo LOC102008504 nuclear receptor subfamily 5 group A member 2 pseudogene NW_004955408 668410 669063 + 102008504 AGCD01007925 MODEL 8710272 protein-coding Ifrd2 interferon related developmental regulator 2 ENCODES a protein that exhibits ribosome binding (ortholog); translation repressor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); negative regulation of translation (ortholog) NW_004955532 2101202 2106779 - 102028796 AGCD01070216;AGCD01070217;GBCB01001546;XM_005410255 XP_005410312 MODEL 8729590 protein-coding Kcnj9 potassium inwardly rectifying channel subfamily J member 9 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN regulation of presynaptic membrane potential (ortholog); FOUND IN inward rectifier potassium channel complex (ortholog); parallel fiber to Purkinje cell synapse (ortholog); presynaptic membrane (ortholog) NW_004955468 11868358 11877298 + 102013275 AGCD01052139;GBBH01087521;XM_005400191;XM_005400192 XP_005400248;XP_005400249 MODEL 9032194 protein-coding Gramd2a GRAM domain containing 2A ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN endoplasmic reticulum-plasma membrane tethering (ortholog); regulation of store-operated calcium entry (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); organelle membrane contact site (ortholog); plasma membrane (ortholog) NW_004955450 4936357 4960643 + 102005431 AGCD01042486;AGCD01042487;GBDK01013410;XM_005393624 XP_005393681 MODEL 8785930 pseudo LOC102020612 60S ribosomal protein L6-like NW_004955441 231433 232280 + 102020612 AGCD01036691 MODEL 8853606 ncrna LOC102014272 uncharacterized LOC102014272 NW_004955431 13595122 13605665 + 102014272 AGCD01030311;GBCE01113209;XR_001234614;XR_001234615 MODEL 8892956 ncrna LOC102008163 uncharacterized LOC102008163 NW_004955448 3515139 3550351 + 102008163 AGCD01041335;GBDF01279163;XR_262458 MODEL 8801714 protein-coding Cps1 carbamoyl-phosphate synthase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); carbamoyl-phosphate synthase (ammonia) activity (ortholog); INVOLVED IN carbamoyl phosphate biosynthetic process (ortholog); cellular response to ammonium ion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Acidoses (ortholog); alcohol-associated liver disease (ortholog); Animal Hepatitis (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial nucleoid (ortholog) NW_004955457 4848116 4961384 - 102027719 AGCD01046798;AGCD01046799;AGCD01046800;AGCD01046801;AGCD01046802;GBCQ01186219;XM_005396941 XP_005396998 MODEL 8882152 ncrna LOC102020283 uncharacterized LOC102020283 NW_004955436 22200426 22209843 - 102020283 AGCD01034087;GBCC01021982;XR_261808 MODEL 9007829 protein-coding LOC102013554 olfactory receptor 4L1-like NW_004955550 104998 126818 - 102013554 AGCD01072481;AGCD01072482;XM_005412028 XP_005412085 MODEL 8843524 protein-coding Ankrd28 ankyrin repeat domain 28 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN positive regulation of focal adhesion assembly (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); protein serine/threonine phosphatase complex (ortholog) NW_004955430 8014631 8197434 - 102025277 AGCD01029378;AGCD01029379;AGCD01029380;AGCD01029381;AGCD01029382;AGCD01029383;GBDI01293224;XM_005387446;XM_005387448;XM_013515633;XM_013515634;XM_013515635;XM_013515636;XM_013515637;XM_013515638 XP_005387503;XP_005387505;XP_013371087;XP_013371088;XP_013371089;XP_013371090;XP_013371091;XP_013371092 MODEL 8722476 protein-coding Acad11 acyl-CoA dehydrogenase family member 11 ENCODES a protein that exhibits long-chain fatty acyl-CoA dehydrogenase activity (ortholog); medium-chain fatty acyl-CoA dehydrogenase activity (ortholog); very-long-chain fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); FOUND IN mitochondrial membrane (ortholog); nucleus (ortholog); peroxisome (ortholog) NW_004955501 5871328 5952786 + 102006481 AGCD01064173;AGCD01064174;AGCD01064175;GBCE01176512;GBCE01176513;XM_005406834;XM_005406835 XP_005406891;XP_005406892 MODEL 8847705 protein-coding Cimap1c ciliary microtubule associated protein 1C NW_004955450 2614377 2617064 - 102024866 AGCD01042389;GBDJ01260584;XM_005393499 XP_005393556 MODEL 8932453 pseudo LOC102015773 something about silencing protein 10-like NW_004955440 3836822 3839886 + 102015773 AGCD01036249 MODEL 9013336 protein-coding Drc1 dynein regulatory complex subunit 1 INVOLVED IN axonemal dynein complex assembly (ortholog); axoneme assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cilium (ortholog); cytosol (ortholog); sperm flagellum (ortholog) NW_004955469 8416934 8479961 + 102011644 AGCD01052466;AGCD01052467;AGCD01052468;AGCD01052469;AGCD01052470;AGCD01052471;AGCD01052472;AGCD01052473;GBDJ01233759;XM_005400426;XM_005400429 XP_005400483;XP_005400486 MODEL 39134353 misc_rna 7SK 7SK RNA 39132040 rrna 5S_rRNA 5S ribosomal RNA 10338240 ncrna LOC106149949 uncharacterized LOC106149949 NW_004955458 14382215 14392808 - 106149949 AGCD01047832;XR_001236440 MODEL 9003289 protein-coding Eid2b EP300 interacting inhibitor of differentiation 2B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of myoblast differentiation (ortholog); FOUND IN nucleus (ortholog) NW_004955468 48573 50029 + 102019996 AGCD01051677;GBCQ01058768;XM_005399765 XP_005399822 MODEL 8795440 protein-coding LOC102007756 two pore calcium channel protein 2-like NW_004955470 3199435 3237984 - 102007756 AGCD01052693;GBDK01185352;XM_005400630;XM_005400631;XM_005400632;XM_013522828;XM_013522829 XP_005400687;XP_005400688;XP_005400689;XP_013378282;XP_013378283 MODEL 8976933 pseudo LOC102012779 dynactin subunit 6 pseudogene NW_004955425 21033663 21038693 - 102012779 AGCD01025781 MODEL 8913986 protein-coding Ddx27 DEAD-box helicase 27 INVOLVED IN rRNA processing (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955445 8881062 8899895 - 102006506 AGCD01039617;AGCD01039618;GBDJ01176930;XM_005392332 XP_005392389 MODEL 8742731 protein-coding LOC102003815 vomeronasal type-2 receptor 116-like NW_004955563 73850 94496 - 102003815 AGCD01074040;AGCD01074041;AGCD01074042;XM_005413096 XP_005413153 MODEL 8889320 pseudo LOC102024507 kinesin-associated protein 3-like NW_004955437 19627016 19630188 + 102024507 AGCD01034861 MODEL 8800431 protein-coding Il33 interleukin 33 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-33 receptor binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to mechanical stimulus (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); allergic asthma (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nucleoplasm (ortholog) NW_004955434 10145449 10187595 + 102006603 AGCD01032327;GBBH01050842;XM_005388671;XM_005388672;XM_013516393 XP_005388728;XP_005388729;XP_013371847 MODEL 8979167 pseudo LOC102008893 60S ribosomal protein L17 pseudogene NW_004955439 18545099 18545654 + 102008893 AGCD01036056 MODEL 39133766 misc_rna 7SK 7SK RNA 9040257 pseudo LOC102009655 dynein assembly factor 3, axonemal homolog NW_004955441 695019 709803 - 102009655 AGCD01036728;AGCD01036729;AGCD01036730;AGCD01036731 MODEL 9024338 protein-coding LOC102021771 vomeronasal type-1 receptor 4-like NW_004955421 22001278 22002312 + 102021771 AGCD01022127;XM_005383835 XP_005383892 MODEL 8751419 protein-coding Jade3 jade family PHD finger 3 INVOLVED IN regulation of cell cycle (ortholog); regulation of DNA biosynthetic process (ortholog); regulation of DNA replication (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955516 998854 1133013 - 102024837 AGCD01067408;AGCD01067409;AGCD01067410;AGCD01067411;AGCD01067412;AGCD01067413;GBDF01251303;XM_005408972 XP_005409029 MODEL 9051384 pseudo LOC102014668 ribosomal protein S6 kinase beta-1-like NW_004955418 29286507 29287739 + 102014668 AGCD01019455 MODEL 9029469 pseudo LOC102011585 small ubiquitin-related modifier 2 pseudogene NW_004955437 7866518 7866791 + 102011585 AGCD01034470 MODEL 39131841 rrna 5S_rRNA 5S ribosomal RNA 9051926 protein-coding Cspp1 centrosome and spindle pole associated protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of cell division (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH Dandy-Walker syndrome (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); spindle (ortholog) NW_004955444 12111375 12217065 - 102009430 AGCD01039060;AGCD01039061;AGCD01039062;AGCD01039063;GBCE01008113;XM_005392126;XM_005392127;XM_005392128;XM_005392129;XM_005392130;XM_005392131;XM_005392132;XM_005392135;XM_013518153;XM_013518154;XM_013518155;XR_262258 XP_005392183;XP_005392184;XP_005392185;XP_005392186;XP_005392187;XP_005392188;XP_005392189;XP_005392192;XP_013373607;XP_013373608;XP_013373609 MODEL 8874791 ncrna LOC102016160 uncharacterized LOC102016160 NW_004955481 10053363 10056863 + 102016160 AGCD01057135;GBDF01249735;XR_263806 MODEL 9042158 protein-coding Btbd3 BTB domain containing 3 INVOLVED IN cerebral cortex development (ortholog); dendrite morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955415 21588669 21602990 + 102027294 AGCD01016513;GBDF01221665;XM_005380880;XM_005380882;XM_013512365 XP_005380937;XP_005380939;XP_013367819 MODEL 39134048 misc_rna 7SK 7SK RNA 9052009 ncrna LOC102010381 uncharacterized LOC102010381 NW_004955495 7993126 7997095 - 102010381 AGCD01062174;GBCQ01010353;XR_264169 MODEL 9066624 protein-coding Ankrd29 ankyrin repeat domain 29 NW_004955402 11751417 11775499 - 102019874 AGCD01000306;AGCD01000307;GBBH01101627;GBDK01000009;XM_013504248 XP_013359702 MODEL 8995090 protein-coding LOC102017662 histone H4 NW_004955483 846605 850748 + 102017662 AGCD01057634;XM_013503799 XP_013359253 MODEL 9046681 ncrna LOC102009265 uncharacterized LOC102009265 NW_004955412 20503994 20512991 + 102009265 AGCD01013010;GBDF01155155;XR_260005 MODEL 9014291 pseudo LOC102008506 nucleoplasmin-3 pseudogene NW_004955409 22543962 22544416 - 102008506 AGCD01010041 MODEL 8740165 pseudo LOC102021017 60S ribosomal protein L22 pseudogene NW_004955489 1859959 1860405 - 102021017 AGCD01059850 MODEL 8948395 protein-coding LOC102019268 cytoskeleton-associated protein 2-like NW_004955475 12067113 12069248 - 102019268 AGCD01055178;GBDI01308945;XM_013502802 XP_013358256 MODEL 8838711 protein-coding Erich3 glutamate rich 3 INVOLVED IN cilium assembly (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955423 18009243 18110340 + 102028651 AGCD01023866;GBDI01375173;XM_005385238;XM_005385239 XP_005385295;XP_005385296 MODEL 8895606 protein-coding LOC102012002 probable N-acetyltransferase CML1 NW_004955424 12018064 12026229 + 102012002 AGCD01024589;GBCQ01036370;XM_005385547;XM_005385548;XM_005385549;XM_005385551;XM_013514658;XM_013514659;XM_013514660;XM_013514661 XP_005385604;XP_005385605;XP_005385606;XP_005385608;XP_013370112;XP_013370113;XP_013370114;XP_013370115 MODEL 8918152 protein-coding Eid3 EP300 interacting inhibitor of differentiation 3 FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); Smc5-Smc6 complex (ortholog) NW_004955405 38897494 38898057 + 102011500 AGCD01005492;GBDF01050141;XM_005374672 XP_005374729 MODEL 8927467 pseudo LOC102015369 DNA endonuclease RBBP8 pseudogene NW_004955405 5020117 5022070 - 102015369 AGCD01004673 MODEL 8852025 pseudo LOC102020616 thiamin pyrophosphokinase 1 pseudogene NW_004955555 1798411 1805160 - 102020616 AGCD01073102;AGCD01073103 MODEL 8780777 protein-coding Ddx28 DEAD-box helicase 28 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955484 8609895 8612309 + 102010698 AGCD01058393;GBDF01192146;XM_005403587 XP_005403644 MODEL 8717173 protein-coding LOC102008165 filaggrin-2 NW_004955589 115942 127045 + 102008165 AGCD01076155;AGCD01076156;GBCC01029912;XM_005414527;XM_013509950;XM_013509951 XP_005414584;XP_013365404;XP_013365405 MODEL 8886233 protein-coding Enox2 ecto-NOX disulfide-thiol exchanger 2 INVOLVED IN electron transport chain (ortholog); ultradian rhythm (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); malignant mesothelioma (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955473 4123403 4455268 + 102004379 AGCD01053946;AGCD01053947;AGCD01053948;AGCD01053949;AGCD01053950;AGCD01053951;GBCE01168964;XM_005401229;XM_005401230;XM_005401231;XM_013523085 XP_005401286;XP_005401287;XP_005401288;XP_013378539 MODEL 39133767 misc_rna 7SK 7SK RNA 9065988 ncrna LOC102016544 uncharacterized LOC102016544 NW_004955451 119497 120688 + 102016544 AGCD01042918;GBDJ01131534;XR_001236000 MODEL 8721499 protein-coding Fbxw7 F-box and WD repeat domain containing 7 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); phosphothreonine residue binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); lung development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); basal cell carcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955471 6852459 7026590 - 102025567 AGCD01053132;AGCD01053133;GBDF01249324;XM_005400897;XM_005400898;XM_005400900;XM_005400901 XP_005400954;XP_005400955;XP_005400957;XP_005400958 MODEL 39134354 misc_rna 7SK 7SK RNA 8979304 pseudo LOC102013900 putative C-mannosyltransferase DPY19L2P2 NW_004955452 10407032 10408684 + 102013900 AGCD01044275 MODEL 9029942 ncrna LOC102012781 uncharacterized LOC102012781 NW_004955506 899099 904521 - 102012781 AGCD01065240;GBCE01032246;XR_264316 MODEL 8737570 protein-coding LOC102011157 olfactory receptor 2B11-like NW_004955576 1315227 1322081 + 102011157 AGCD01075372;XM_005413952 XP_005414009 MODEL 8799146 protein-coding Ift122 intraflagellar transport 122 INVOLVED IN camera-type eye morphogenesis (ortholog); cilium assembly (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH Cardiac Edema (ortholog); Ciliary Motility Disorders (ortholog); cone-rod dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); ciliary transition zone (ortholog) NW_004955429 17795757 17858609 - 102013526 AGCD01028867;AGCD01028868;GBDF01044513;XM_005387088;XM_005387089;XM_005387090 XP_005387145;XP_005387146;XP_005387147 MODEL 8850442 protein-coding Kcnk1 potassium two pore domain channel subfamily K member 1 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); ligand-gated channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); chloride transmembrane transport (ortholog); glutamate secretion (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Chronic Periodontitis (ortholog); Deafness (ortholog); Hyperplasia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); endosome (ortholog) NW_004955492 5805170 5846402 - 102029523 AGCD01060753;GBCE01055129;XM_005404961 XP_005405018 MODEL 8830743 protein-coding Gramd2b GRAM domain containing 2B ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytoplasmic microtubule (ortholog) NW_004955521 4220325 4320452 + 102017267 AGCD01068256;AGCD01068257;AGCD01068258;AGCD01068259;GBDK01284185;XM_005409323;XM_005409325;XM_013507088;XM_013507089 XP_005409380;XP_005409382;XP_013362542;XP_013362543 MODEL 8775914 protein-coding Dach2 dachshund family transcription factor 2 INVOLVED IN development of primary female sexual characteristics (ortholog) NW_004955525 667452 1285776 + 102017909 AGCD01069004;AGCD01069005;AGCD01069006;AGCD01069007;AGCD01069008;AGCD01069009;AGCD01069010;AGCD01069011;AGCD01069012;AGCD01069013;AGCD01069014;AGCD01069015;AGCD01069016;AGCD01069017;AGCD01069018;AGCD01069019;AGCD01069020;AGCD01069021;AGCD01069022;AGCD01069023;AGCD01069024;AGCD01069025;AGCD01069026;AGCD01069027;AGCD01069028;AGCD01069029;AGCD01069030;AGCD01069031;XM_005409722 XP_005409779 MODEL 8827240 pseudo LOC102013182 pre-mRNA-splicing factor SPF27 pseudogene NW_004955494 8279287 8279936 - 102013182 AGCD01061582 MODEL 8883822 ncrna LOC102009657 uncharacterized LOC102009657 NW_004955442 3325633 3327511 + 102009657 AGCD01037505;GBDF01145907;XR_262111 MODEL 8966929 protein-coding LOC102020284 HLA class II histocompatibility antigen, DRB1-1 beta chain-like NW_004955437 1199927 1215823 - 102020284 AGCD01034196;AGCD01034197;GBBH01035307;GBDK01395633;XM_013517039 XP_013372493 MODEL 8814145 protein-coding Il34 interleukin 34 ENCODES a protein that exhibits identical protein binding (ortholog); macrophage colony-stimulating factor receptor binding (ortholog); INVOLVED IN interleukin-34-mediated signaling pathway (ortholog); microglial cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN extracellular space (ortholog) NW_004955484 3362240 3429031 + 102005145 AGCD01058176;AGCD01058177;AGCD01058178;AGCD01058179;AGCD01058180;AGCD01058181;GBCE01095073;XM_005403487;XM_005403488;XM_005403492;XM_013503872;XM_013503873 XP_005403544;XP_005403545;XP_005403549;XP_013359326;XP_013359327 MODEL 8771718 ncrna LOC102005636 uncharacterized LOC102005636 NW_004955542 148238 153369 + 102005636 AGCD01071458;AGCD01071459;GBDF01025206;XR_264850 MODEL 8893159 protein-coding Cimap1d CIMAP1 family member D FOUND IN cytoplasmic microtubule (ortholog) NW_004955495 7210526 7214886 + 102017354 AGCD01062124;GBCB01051776;XM_013505063 XP_013360517 MODEL 9051481 protein-coding LOC102020618 sialic acid-binding Ig-like lectin 14 NW_004955558 1317453 1350888 - 102020618 AGCD01073434;AGCD01073435;AGCD01073436;AGCD01073437;AGCD01073438;GBBH01198034;GBBH01198038;XM_013508897;XM_013508898;XM_013508899 XP_013364351;XP_013364352;XP_013364353 MODEL 39131842 rrna 5S_rRNA 5S ribosomal RNA 8977027 protein-coding LOC102015774 olfactory receptor 13A1 NW_004955546 2478051 2479302 - 102015774 AGCD01072092;XM_005411791;XM_013508416 XP_005411848;XP_013363870 MODEL 8724309 protein-coding Hsf5 heat shock transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription repressor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog); XY body (ortholog) NW_004955451 4564576 4601868 + 102025309 AGCD01043131;AGCD01043132;AGCD01043133;GBDF01053109;GBDF01053111;XM_013519059 XP_013374513 MODEL 10285570 ncrna LOC106149950 uncharacterized LOC106149950 NW_004955458 4878926 4881805 - 106149950 AGCD01047444;GBDK01106220;XR_001236443 MODEL 8986140 protein-coding Dhx58 DExH-box helicase 58 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of innate immune response (ortholog); negative regulation of MDA-5 signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955451 16186263 16191928 - 102012597 AGCD01043658;GBBH01137215;XM_013519384;XM_013519386;XM_013519387 XP_013374838;XP_013374840;XP_013374841 MODEL 9061946 protein-coding CUNH17orf99 chromosome unknown C17orf99 homolog INVOLVED IN mature B cell differentiation involved in immune response (ortholog); positive regulation of immunoglobulin production in mucosal tissue (ortholog); FOUND IN extracellular space (ortholog) NW_004955506 4397221 4408645 - 102026773 AGCD01065338;GBDI01334322;XM_013505961 XP_013361415 MODEL 39134049 misc_rna 7SK 7SK RNA 8785117 protein-coding LOC102014275 coiled-coil domain-containing protein 160-like NW_004955433 1192697 1195183 - 102014275 AGCD01031350;GBDF01044090;XM_005388185;XM_005388186;XM_013516210 XP_005388242;XP_005388243;XP_013371664 MODEL 8910318 ncrna LOC102008507 uncharacterized LOC102008507 NW_004955410 6953396 6959673 - 102008507 AGCD01010708;GBDF01017313;XR_259822 MODEL 9031589 pseudo LOC102003820 40S ribosomal protein S16 pseudogene NW_004955579 331808 332248 - 102003820 AGCD01075545 MODEL 8871021 protein-coding Ankrd30a ankyrin repeat domain 30A ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955546 798445 890288 + 102029226 AGCD01072025;AGCD01072026;AGCD01072027;AGCD01072028;AGCD01072029;AGCD01072030;AGCD01072031;AGCD01072032;GBDJ01277982;XM_013508375;XM_013508376;XM_013508377;XM_013508378;XM_013508379;XM_013508380;XM_013508381 XP_013363829;XP_013363830;XP_013363831;XP_013363832;XP_013363833;XP_013363834;XP_013363835 MODEL 8951352 ncrna LOC102008894 uncharacterized LOC102008894 NW_004955545 2826658 2829716 + 102008894 AGCD01071923;GBDF01218328;XR_264881 MODEL 8730209 pseudo LOC102013556 calmodulin-like NW_004955442 9087589 9088397 + 102013556 AGCD01037662 MODEL 8850074 ncrna LOC102019271 uncharacterized LOC102019271 NW_004955480 8712236 8827968 - 102019271 AGCD01056730;AGCD01056731;AGCD01056732;AGCD01056733;GBBH01073803;XR_001230895;XR_001230896;XR_001230897;XR_001230899;XR_263747 MODEL 8861163 pseudo LOC102021775 cell division cycle 5-like protein NW_004955493 8532315 8537845 + 102021775 AGCD01061309 MODEL 8893098 ncrna LOC102014669 uncharacterized LOC102014669 NW_004955483 632342 690220 + 102014669 AGCD01057625;AGCD01057626;AGCD01057627;GBDF01194267;XR_001231012 MODEL 8836636 protein-coding Acad8 acyl-CoA dehydrogenase family member 8 PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); Isobutyryl-CoA Dehydrogenase Deficiency (ortholog); FOUND IN mitochondrion (ortholog) NW_004955412 35067637 35083889 + 102030402 AGCD01013397;AGCD01013398;AGCD01013399;GBCQ01063988;XM_005378593;XM_005378594;XM_005378595 XP_005378650;XP_005378651;XP_005378652 MODEL 39132041 rrna 5S_rRNA 5S ribosomal RNA 9011073 protein-coding Gramd4 GRAM domain containing 4 INVOLVED IN negative regulation of toll-like receptor 9 signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 30603820 30656940 + 102012850 AGCD01014612;GBBH01207818;XM_005379513;XM_005379514 XP_005379570;XP_005379571 MODEL 39133768 misc_rna 7SK 7SK RNA 8968931 ncrna LOC102016547 uncharacterized LOC102016547 NW_004955403 22757246 22772806 + 102016547 AGCD01002231;GBDF01176504;XR_259197;XR_259198 MODEL 8784244 protein-coding LOC102009660 protein HIRA ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN gastrulation (ortholog); muscle cell differentiation (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); Fanconi anemia complementation group T (ortholog); prostate cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) NW_004955442 18581370 18673590 + 102009660 AGCD01038011;AGCD01038012;GBCQ01129723;GBDI01264132;XM_005391780 XP_005391837 MODEL 8850637 pseudo LOC102007759 rho-related GTP-binding protein RhoG-like NW_004955475 10913053 10914439 + 102007759 AGCD01055126 MODEL 8987314 protein-coding Enpep glutamyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); metalloaminopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); angiotensin maturation (ortholog); cell migration (ortholog); PARTICIPATES IN angiotensin III signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH autistic disorder (ortholog); Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955457 15863881 15943074 - 102023230 AGCD01047099;AGCD01047100;GBCQ01011653;XM_005397109 XP_005397166 MODEL 8966240 pseudo LOC102020620 E3 ubiquitin-protein ligase RNF13 pseudogene NW_004955444 13402641 13403733 - 102020620 AGCD01039100 MODEL 9060620 protein-coding Btbd6 BTB domain containing 6 NW_004955538 3494950 3496888 + 102005179 AGCD01071166;GBBH01033922;GBCE01001883;XM_005410859 XP_005410916 MODEL 8854232 protein-coding Cpsf1 cleavage and polyadenylation specific factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Disease Progression (ortholog); Myopia 27 (ortholog); Stomach Neoplasms (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog) NW_004955454 3024324 3039004 - 102003833 AGCD01045048;GBBH01089190;XM_005395878;XM_005395879 XP_005395935;XP_005395936 MODEL 39134050 misc_rna 7SK 7SK RNA 8932382 ncrna LOC102012784 uncharacterized LOC102012784 NW_004955428 17863566 17878885 + 102012784 AGCD01028052;GBCQ01167239;XR_261304 MODEL 8824522 protein-coding Kcnk10 potassium two pore domain channel subfamily K member 10 ENCODES a protein that exhibits mechanosensitive potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to arachidonate (ortholog); memory (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Deafness (ortholog) NW_004955438 10867695 10996005 - 102005182 AGCD01035218;AGCD01035219;AGCD01035220;GBDF01262571;XM_005390252 XP_005390309 MODEL 8901025 protein-coding Ddx31 DEAD-box helicase 31 INVOLVED IN ribosome biogenesis (ortholog); FOUND IN nucleolus (ortholog) NW_004955513 1970386 2036572 - 102022842 AGCD01066867;GBDF01157939;GBDK01357545;XM_005408640 XP_005408697 MODEL 8848102 pseudo LOC102008167 sorting nexin-2-like NW_004955402 45656377 45658152 - 102008167 AGCD01001141 MODEL 8904048 protein-coding Drc10 dynein regulatory complex subunit 10 FOUND IN ciliary basal body (ortholog) NW_004955482 9515248 9538410 - 102014900 AGCD01057574;GBDK01431222;XM_005403215 XP_005403272 MODEL 8957487 ncrna LOC102019274 uncharacterized LOC102019274 NW_004955482 9786132 9790762 - 102019274 AGCD01057583;XR_263854 MODEL 39131374 protein-coding IL36G interleukin 36 gamma 8815373 protein-coding Jag1 jagged canonical Notch ligand 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); Notch binding (ortholog); phospholipid binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); animal organ regeneration (ortholog); aorta morphogenesis (ortholog); PARTICIPATES IN Alagille syndrome pathway; altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alagille syndrome (ortholog); ALAGILLE SYNDROME 1 (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955415 20490414 20526068 - 102026214 AGCD01016489;GBDI01297353;GBDJ01141831;XM_005380879 XP_005380936 MODEL 8809134 ncrna LOC102010382 uncharacterized LOC102010382 NW_004955424 3479982 3493499 + 102010382 AGCD01024311;GBDF01055317;XR_001234144 MODEL 8760364 protein-coding Btbd7 BTB domain containing 7 INVOLVED IN regulation of branching involved in salivary gland morphogenesis (ortholog); FOUND IN nucleus (ortholog) NW_004955438 15345678 15445705 - 102004643 AGCD01035365;AGCD01035366;AGCD01035367;GBCB01121971;XM_005390344;XM_013517216;XM_013517217;XM_013517218 XP_005390401;XP_013372670;XP_013372671;XP_013372672 MODEL 8780924 pseudo LOC102017663 nuclear receptor-binding factor 2 pseudogene NW_004955419 27290865 27292952 + 102017663 AGCD01020429 MODEL 8930142 ncrna LOC102014671 uncharacterized LOC102014671 NW_004955484 8644610 8649357 + 102014671 AGCD01058393;GBDF01222456;XR_263895 MODEL 8972759 protein-coding Fbxw8 F-box and WD repeat domain containing 8 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); Golgi organization (ortholog); labyrinthine layer blood vessel development (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN 3M complex (ortholog); Cul7-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955455 14099888 14204889 - 102023980 AGCD01046082;AGCD01046083;AGCD01046084;GBBH01114652;XM_005396550;XM_013520439 XP_005396607;XP_013375893 MODEL 39131433 protein-coding CIMAP1D CIMAP1 family member D 8770712 protein-coding LOC102024508 forkhead box protein L1 NW_004955541 1387390 1392842 + 102024508 AGCD01071378;AGCD01071379;GBCE01132585;GBCE01150013;XM_013508009 XP_013363463 MODEL 8748231 ncrna LOC102011163 uncharacterized LOC102011163 NW_004955450 15153068 15157236 - 102011163 AGCD01042782;GBCB01071256;XR_001235830;XR_001235831 MODEL 8794075 protein-coding LOC102012004 cx9C motif-containing protein 4-like NW_004955425 2298142 2298943 - 102012004 AGCD01025257;GBDF01080910;XM_005385839 XP_005385896 MODEL 8729201 protein-coding LOC102021022 multidrug resistance protein 1-like NW_004955494 8128822 8206293 - 102021022 AGCD01061578;AGCD01061579;AGCD01061580;GBDJ01355784;XM_005405512;XM_013505033;XM_013505034;XM_013505035;XM_013505036 XP_005405569;XP_013360487;XP_013360488;XP_013360489;XP_013360490 MODEL 8729783 protein-coding LOC102020625 conserved oligomeric Golgi complex subunit 1-like NW_004956455 1203 4140 - 102020625 AGCD01079623;AGCD01079624;GBBH01032449;GBBH01032450;XM_005415200 XP_005415257 MODEL 8771120 protein-coding CUNH18orf32 chromosome unknown C18orf32 homolog INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Glycosylphosphatidylinositol Biosynthesis Defect 25 (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955402 34562221 34566677 - 102012143 AGCD01000864;AGCD01000865;GBBH01061210;XM_005372908;XM_005372909 XP_005372965;XP_005372966 MODEL 9014306 pseudo LOC102011588 uncharacterized LOC102011588 NW_004955437 2264085 2299089 - 102011588 AGCD01034263 MODEL 8821379 protein-coding LOC102016161 olfactory receptor 2T33-like NW_004955418 30651317 30652267 + 102016161 AGCD01019539;XM_013512885 XP_013368339 MODEL 8787079 pseudo LOC102009267 60S ribosomal protein L7a pseudogene NW_004955467 9883721 9884522 + 102009267 AGCD01051535 MODEL 8729828 ncrna LOC102021779 uncharacterized LOC102021779 NW_004955495 5177777 5182165 + 102021779 AGCD01061979;AGCD01061980;GBDF01046728;XR_264151;XR_264152 MODEL 39134355 misc_rna 7SK 7SK RNA 9024104 pseudo LOC102012006 RWD domain-containing protein 1-like NW_004955502 2548815 2559921 - 102012006 AGCD01064301 MODEL 8999565 ncrna LOC102013902 uncharacterized LOC102013902 NW_004955406 3835927 3838964 - 102013902 AGCD01005677;GBDF01177185;XR_259472 MODEL 9062637 protein-coding Hsh2d hematopoietic SH2 domain containing ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of B cell apoptotic process (ortholog); negative regulation of mitochondrial depolarization (ortholog); T cell activation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955524 1392805 1399662 - 102023629 AGCD01068749;GBDI01217878;XM_005409486;XM_005409489 XP_005409543;XP_005409546 MODEL 8854636 protein-coding LOC102015779 sialic acid-binding Ig-like lectin 5 NW_004955558 1125684 1129673 - 102015779 AGCD01073417;GBBH01003390;GBDK01081187;XM_013508886 XP_013364340 MODEL 8759181 ncrna LOC102016548 uncharacterized LOC102016548 NW_004955451 6983963 6987127 - 102016548 AGCD01043220;GBDK01225635;XR_262587 MODEL 8886345 pseudo LOC102007760 uncharacterized LOC102007760 NW_004955476 4007426 4119894 - 102007760 AGCD01055264;AGCD01055265;AGCD01055266 MODEL 8879098 protein-coding Eif1 eukaryotic translation initiation factor 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN positive regulation of mRNA cis splicing, via spliceosome (ortholog); regulation of translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN cytoplasm (ortholog); eukaryotic 43S preinitiation complex (ortholog); eukaryotic 48S preinitiation complex (ortholog) NW_004955451 15978571 15980352 + 102025315 AGCD01043645;GBBH01003705;GBDK01012882;XM_013519437 XP_013374891 MODEL 8791821 pseudo LOC102010387 selenide, water dikinase 2-like NW_004955502 7355026 7356276 - 102010387 AGCD01064441 MODEL 8821423 protein-coding Erich4 glutamate rich 4 NW_004955555 369918 373848 + 102018655 AGCD01073025;AGCD01073026;GBDI01212353;XM_005412351;XR_001232313 XP_005412408 MODEL 8935392 protein-coding LOC102019275 histone H2A type 1 NW_004955483 901347 913474 - 102019275 AGCD01057637;GBCQ01010632;XM_005403303;XM_005403304 XP_005403360;XP_005403361 MODEL 8968751 pseudo LOC102008511 transmembrane protein 14A pseudogene NW_004955464 11151367 11152100 - 102008511 AGCD01050137;XR_263212 MODEL 8857611 pseudo LOC102014276 mortality factor 4-like protein 1 pseudogene NW_004955433 8231311 8233189 + 102014276 AGCD01031587 MODEL 8798141 protein-coding Dhx8 DEAH-box helicase 8 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 16941422 16963690 + 102004549 AGCD01043713;AGCD01043714;GBDF01047527;XM_005394503 XP_005394560 MODEL 8847609 protein-coding Dact1 dishevelled binding antagonist of beta catenin 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); delta-catenin binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); dendrite morphogenesis (ortholog); embryonic hindgut morphogenesis (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome (ortholog); Colorectal Neoplasms (ortholog); Townes-Brocks syndrome (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955466 12367760 12374141 + 102022483 AGCD01051127;GBCE01045780;GBCQ01030468;XM_013522014 XP_013377468 MODEL 8764255 pseudo LOC102008895 60S ribosomal protein L26-like NW_004955441 12522219 12523098 + 102008895 AGCD01037123 MODEL 8980955 pseudo LOC102013183 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955495 4683150 4684723 - 102013183 AGCD01061943 MODEL 8954133 protein-coding Ankrd31 ankyrin repeat domain 31 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation involved in reciprocal meiotic recombination (ortholog); positive regulation of meiotic DNA double-strand break formation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); long QT syndrome (ortholog); primary ovarian insufficiency (ortholog); FOUND IN chromatin (ortholog) NW_004955425 25483400 25647904 + 102027087 AGCD01025921;AGCD01025922;AGCD01025923;AGCD01025924;AGCD01025925;GBDF01023868;XM_013514798 XP_013370252 MODEL 8967950 protein-coding Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); cyclic-GMP-AMP hydrolase activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate metabolic process (ortholog); adipose tissue development (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN insulin signaling pathway; niacin metabolic pathway; pantothenic acid metabolic pathway; ASSOCIATED WITH Aortic Calcification (ortholog); aortic valve disease 1 (ortholog); arterial calcification of infancy (ortholog); FOUND IN apical dendrite (ortholog); basal dendrite (ortholog); cell body (ortholog) NW_004955436 12416147 12477214 + 102030663 AGCD01033841;GBCE01001596;GBDJ01419766;XM_013516652 XP_013372106 MODEL 8850080 pseudo LOC102019280 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 pseudogene NW_004955420 1690583 1691948 - 102019280 AGCD01020576 MODEL 9033653 protein-coding LOC102005637 cytochrome c oxidase subunit 8C, mitochondrial FOUND IN mitochondrion (ortholog) NW_004955438 15480509 15481812 + 102005637 AGCD01035370;GBDF01049097;XM_005390345 XP_005390402 MODEL 39131844 rrna 5S_rRNA 5S ribosomal RNA 8863296 protein-coding LOC102012785 histone H1x ENCODES a protein that exhibits structural constituent of chromatin (ortholog); INVOLVED IN chromosome condensation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); lung adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955429 13671907 13673689 - 102012785 AGCD01028760;AGCD01028761;GBBH01032046;GBCE01001858;XM_005387002 XP_005387059 MODEL 39133769 misc_rna 7SK 7SK RNA 8981905 protein-coding Kcnk12 potassium two pore domain channel subfamily K member 12 ENCODES a protein that exhibits identical protein binding (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Lynch syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955441 14270030 14281639 - 102018338 AGCD01037191;AGCD01037192;AGCD01037193;GBDF01001426;XM_013517518 XP_013372972 MODEL 8721724 protein-coding Grap GRB2 related adaptor protein INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 114 (ortholog) NW_004955467 559411 581098 + 102006995 AGCD01051226;GBDI01132002;XM_005399286 XP_005399343 MODEL 8818709 protein-coding Acad9 acyl-CoA dehydrogenase family member 9 ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); medium-chain fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN long-chain fatty acid metabolic process (ortholog); medium-chain fatty acid metabolic process (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 20 (ortholog); FOUND IN dendrite (ortholog); mitochondrial complex I intermediate assembly complex (ortholog); mitochondrial membrane (ortholog) NW_004955450 10576615 10603779 - 102013463 AGCD01042627;GBDJ01180620;XM_005393740;XM_013518917 XP_005393797;XP_013374371 MODEL 8920507 pseudo LOC102015374 60S ribosomal protein L4 pseudogene NW_004955406 5796336 5796880 - 102015374 AGCD01005741 MODEL 8953426 protein-coding Ift140 intraflagellar transport 140 INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); autosomal dominant polycystic kidney disease (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955442 15625429 15719006 + 102004648 AGCD01037877;AGCD01037878;GBDJ01108332;XM_005391568;XM_013517666;XM_013517667;XM_013517668 XP_005391625;XP_013373120;XP_013373121;XP_013373122 MODEL 8701964 protein-coding Cimap2 ciliary microtubule associated protein 2 NW_004955464 4571161 4589879 - 102025445 AGCD01049992;GBDF01122493;XM_005398511 XP_005398568 MODEL 8718562 ncrna LOC102013560 uncharacterized LOC102013560 NW_004955443 13036898 13044656 - 102013560 AGCD01038459;GBDF01022385;XR_262205 MODEL 8744537 protein-coding Csrnp1 cysteine and serine rich nuclear protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN face morphogenesis (ortholog); platelet-derived growth factor receptor signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); dilated cardiomyopathy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955427 24825010 24830030 + 102026027 AGCD01027524;GBDF01154253;GBDK01360113;XM_005386562 XP_005386619 MODEL 8979819 ncrna LOC102011164 uncharacterized LOC102011164 NW_004955403 2029851 2035069 + 102011164 AGCD01001728;GBDF01163401;XR_001233149;XR_001233150 MODEL 9005767 protein-coding LOC102020285 olfactory receptor 2A5-like NW_004955537 2745101 2746051 - 102020285 AGCD01070938;XM_005410631 XP_005410688 MODEL 8704596 ncrna LOC102020626 uncharacterized LOC102020626 NW_004955451 15331564 15337087 + 102020626 AGCD01043605;GBDJ01052134;XR_001235959;XR_001235960 MODEL 9039003 ncrna LOC102011589 uncharacterized LOC102011589 NW_004955540 3450472 3456881 - 102011589 AGCD01071339;GBDF01209410;XR_001232117;XR_001232118;XR_264829 MODEL 9010888 protein-coding LOC102008168 vomeronasal type-1 receptor 2-like NW_004955603 429287 430189 - 102008168 AGCD01076845;XM_005414839 XP_005414896 MODEL 8713398 ncrna LOC102013185 uncharacterized LOC102013185 NW_004955495 5765435 5770369 - 102013185 AGCD01062026;AGCD01062027;GBDF01083739;XR_264157 MODEL 8940884 pseudo LOC102017664 HAUS augmin-like complex subunit 2 pseudogene NW_004955419 29773998 29774848 - 102017664 AGCD01020502 MODEL 9039345 protein-coding Ankrd33 ankyrin repeat domain 33 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955547 2263769 2269180 + 102028135 AGCD01072265;GBDK01351700;XM_013508507;XM_013508508;XM_013508509;XM_013508510;XM_013508511 XP_013363961;XP_013363962;XP_013363963;XP_013363964;XP_013363965 MODEL 9062973 ncrna LOC102012008 uncharacterized LOC102012008 NW_004955506 888972 890923 + 102012008 AGCD01065239;GBDF01266491;XR_264312 MODEL 9028411 protein-coding LOC102021781 tubulin alpha-1C chain-like NW_004955499 225128 255221 - 102021781 AGCD01063201;AGCD01063202;AGCD01063203;AGCD01063204;AGCD01063205;AGCD01063206;GBCQ01114400;XM_013505551 XP_013361005 MODEL 8851001 protein-coding Fbxw9 F-box and WD repeat domain containing 9 NW_004955415 31788115 31794174 - 102019593 AGCD01016697;GBCQ01067320;XM_005381020 XP_005381077 MODEL 8799909 ncrna LOC102012792 uncharacterized LOC102012792 NW_004955514 558603 620325 + 102012792 AGCD01067014;AGCD01067015;AGCD01067016;GBDF01088853;XR_001231784;XR_264491 MODEL 8849507 protein-coding Hsp90aa1 heat shock protein 90 alpha family class A member 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to heat (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anaplastic large cell lymphoma (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); axonal growth cone (ortholog); basolateral plasma membrane (ortholog) NW_004955538 1469544 1475010 - 102026352 AGCD01071063;GBCE01002351;GBDK01018086;XM_005410736 XP_005410793 MODEL 39134051 misc_rna 7SK 7SK RNA 8776978 protein-coding LOC102008514 putative olfactory receptor 2B8 NW_004955465 13513122 13518306 - 102008514 AGCD01050613;GBDF01256300;XM_005398955;XM_013521794;XM_013521795 XP_005399012;XP_013377248;XP_013377249 MODEL 8734527 protein-coding Eif1ad eukaryotic translation initiation factor 1A domain containing ASSOCIATED WITH melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 19339111 19343673 + 102021773 AGCD01023001;GBCQ01035749;XM_005384436 XP_005384493 MODEL 9017659 protein-coding CUNH18orf63 chromosome unknown C18orf63 homolog INVOLVED IN male gonad development (ortholog) NW_004955402 57753626 57805255 + 102012712 AGCD01001510;AGCD01001511;AGCD01001512;AGCD01001513;GBDF01306192;XM_005373078;XM_013502881 XP_005373135;XP_013358335 MODEL 8797993 protein-coding Dact2 dishevelled binding antagonist of beta catenin 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); delta-catenin binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner medullary collecting duct development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Liver Neoplasms (ortholog) NW_004955411 4972080 4976011 + 102024538 AGCD01011592;GBCE01037505;GBDF01059772;XM_013510920 XP_013366374 MODEL 10383222 ncrna LOC106149951 uncharacterized LOC106149951 NW_004955458 13289765 13293713 - 106149951 AGCD01047796;GBDF01164666;XR_001236444 MODEL 8808458 protein-coding Dhx9 DExH-box helicase 9 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 3'-5' DNA/RNA helicase activity (ortholog); 3'-5' RNA helicase activity (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to heat (ortholog); PARTICIPATES IN aldosterone signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 75 (ortholog); Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); CRD-mediated mRNA stability complex (ortholog) NW_004955406 21697813 21743551 + 102021089 AGCD01006141;AGCD01006142;GBDK01082941;XM_005375015;XM_005375016 XP_005375072;XP_005375073 MODEL 8995841 protein-coding LOC102016162 histone H2B type 1-H NW_004955483 784433 784869 - 102016162 AGCD01057630;XM_013503795 XP_013359249 MODEL 9042091 protein-coding Il36rn interleukin 36 receptor antagonist INVOLVED IN antifungal humoral response (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); negative regulation of interleukin-17 production (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); Myocardial Reperfusion Injury (ortholog) NW_004955470 1209389 1214730 - 102021960 AGCD01052630;GBCC01027722;XM_005400588;XM_013522678 XP_005400645;XP_013378132 MODEL 8941553 ncrna LOC102009664 uncharacterized LOC102009664 NW_004955566 1804100 1820455 - 102009664 AGCD01074369;GBDI01312924;XR_001232397;XR_001232398;XR_001232399;XR_265024 MODEL 8846662 protein-coding Csrnp2 cysteine and serine rich nuclear protein 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) NW_004955547 1584061 1601556 - 102020056 AGCD01072233;AGCD01072234;GBBH01218735;GBDF01088231;XM_005411889 XP_005411946 MODEL 9010059 protein-coding Drc11 dynein regulatory complex subunit 11 NW_004955453 282601 416715 + 102025973 AGCD01044589;AGCD01044590;AGCD01044591;GBDF01221351;XM_005395314;XM_013519965;XM_013519966;XM_013519967;XM_013519968 XP_005395371;XP_013375419;XP_013375420;XP_013375421;XP_013375422 MODEL 8853998 protein-coding LOC102024510 zinc finger protein 709-like NW_004955546 400816 405424 - 102024510 AGCD01071973;XM_013508420 XP_013363874 MODEL 8844016 protein-coding Btbd9 BTB domain containing 9 INVOLVED IN adult locomotory behavior (ortholog); circadian behavior (ortholog); circadian sleep/wake cycle, non-REM sleep (ortholog); ASSOCIATED WITH intellectual disability (ortholog); restless legs syndrome (ortholog); FOUND IN glutamatergic synapse (ortholog) NW_004955437 4765234 5145033 + 102015147 AGCD01034370;AGCD01034371;AGCD01034372;AGCD01034373;AGCD01034374;AGCD01034375;AGCD01034376;AGCD01034377;AGCD01034378;GBDF01043958;XM_005390124;XM_013516988 XP_005390181;XP_013372442 MODEL 39131350 protein-coding KCNK12 potassium two pore domain channel subfamily K member 12 9062899 pseudo LOC102007765 mitochondrial fission factor-like NW_004955416 10152452 10153091 + 102007765 AGCD01017109 MODEL 8797768 ncrna LOC102015781 uncharacterized LOC102015781 NW_004955443 15377430 15386722 + 102015781 AGCD01038538;GBDF01225293;XR_262208 MODEL 8908535 protein-coding LOC102021024 olfactory receptor 7E24-like NW_004955495 386940 387899 + 102021024 AGCD01061625;XM_013505090 XP_013360544 MODEL 8897189 pseudo LOC102010388 uncharacterized LOC102010388 NW_004955503 3309922 3337412 - 102010388 AGCD01064622 MODEL 8997938 protein-coding Erich5 glutamate rich 5 NW_004955417 13776609 13804241 + 102009607 AGCD01018191;GBDI01354833;XM_005381845;XM_005381846 XP_005381902;XP_005381903 MODEL 9025901 protein-coding LOC102016550 hemicentin-1-like NW_004955835 7426 16611 - 102016550 AGCD01078452;GBCQ01155248;GBDK01321888;XM_005415127 XP_005415184 MODEL 8723936 protein-coding Ankrd33b ankyrin repeat domain 33B NW_004955426 363297 383013 + 102004090 AGCD01026001;GBDI01359209;XM_005386256 XP_005386313 MODEL 8813859 protein-coding Cpsf2 cleavage and polyadenylation specific factor 2 INVOLVED IN mRNA 3'-end processing (ortholog); mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN glutamatergic synapse (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); postsynapse (ortholog) NW_004955438 14449320 14483003 + 102022329 AGCD01035346;GBDF01084085;XM_005390313;XM_005390314;XM_005390315;XM_005390317;XM_005390318;XM_005390319;XM_005390320;XM_005390321;XM_013517185;XM_013517186;XM_013517187;XM_013517189;XM_013517190;XM_013517191;XM_013517192 XP_005390370;XP_005390371;XP_005390372;XP_005390374;XP_005390375;XP_005390376;XP_005390377;XP_005390378;XP_013372639;XP_013372640;XP_013372641;XP_013372643;XP_013372644;XP_013372645;XP_013372646 MODEL 39132042 rrna 5S_rRNA 5S ribosomal RNA 8757357 ncrna LOC102008896 uncharacterized LOC102008896 NW_004955547 2750784 2754477 + 102008896 AGCD01072294;GBBH01190398;XR_001232234;XR_001232235;XR_264910 MODEL 8815120 ncrna LOC102014277 uncharacterized LOC102014277 NW_004955433 14106863 14109014 - 102014277 AGCD01031706;GBDF01146409;XR_261591 MODEL 8786730 protein-coding Cimap3 ciliary microtubule associated protein 3 ENCODES a protein that exhibits beta-tubulin binding (ortholog); gamma-tubulin binding (ortholog); kinesin binding (ortholog); INVOLVED IN cilium organization (ortholog); embryonic heart tube left/right pattern formation (ortholog); positive regulation of kinase activity (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955435 14888554 14898274 + 102025720 AGCD01033256;AGCD01033257;GBDF01000208;XM_005388944;XM_005388945;XM_005388946;XM_005388947 XP_005389001;XP_005389002;XP_005389003;XP_005389004 MODEL 8717510 ncrna LOC102020633 uncharacterized LOC102020633 NW_004955453 16423553 16456778 - 102020633 AGCD01044903;AGCD01044904;GBDI01378176;XR_001236202;XR_001236203;XR_001236204 MODEL 39133770 misc_rna 7SK 7SK RNA 39134356 misc_rna 7SK 7SK RNA 8737937 ncrna LOC102005638 uncharacterized LOC102005638 NW_004955439 17644083 17645810 + 102005638 AGCD01036042;GBDF01110804;XR_001235185;XR_261994 MODEL 8700617 pseudo LOC102013904 zinc finger protein OZF-like NW_004955406 41519064 41522379 + 102013904 AGCD01006685 MODEL 8964013 protein-coding Il3ra interleukin 3 receptor subunit alpha ENCODES a protein that exhibits interleukin-3 binding (ortholog); interleukin-3 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-3-mediated signaling pathway (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; FOUND IN membrane (ortholog) NW_004955499 1004432 1011950 + 102007248 AGCD01063305;GBBH01025894;GBCE01069501;XM_013505601 XP_013361055 MODEL 8929604 protein-coding Jag2 jagged canonical Notch ligand 2 ENCODES a protein that exhibits growth factor activity (ortholog); Notch binding (ortholog); INVOLVED IN auditory receptor cell fate commitment (ortholog); cell differentiation (ortholog); epithelial cell apoptotic process involved in palatal shelf morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 27 (ortholog); Breast Neoplasms (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955538 3421685 3433829 - 102018331 AGCD01071162;GBCE01187516;GBDI01120124;XM_013507878 XP_013363332 MODEL 8851646 ncrna LOC102013192 uncharacterized LOC102013192 NW_004955427 8815744 8828819 + 102013192 AGCD01027078;XR_261244 MODEL 9023657 pseudo LOC102017668 zinc finger and BTB domain-containing protein 44 pseudogene NW_004955420 24964791 24968106 - 102017668 AGCD01021339 MODEL 8987339 protein-coding Acadl acyl-CoA dehydrogenase long chain ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN carnitine catabolic process (ortholog); carnitine metabolic process, CoA-linked (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); long chain 3-hydroxyacyl-CoA dehydrogenase deficiency (ortholog); very long chain acyl-CoA dehydrogenase deficiency (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955457 5266032 5300632 + 102025215 AGCD01046815;GBCQ01006918;XM_013520783 XP_013376237 MODEL 8795575 protein-coding Csrnp3 cysteine and serine rich nuclear protein 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); substance-related disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955449 8450292 8635393 - 102011825 AGCD01042013;AGCD01042014;AGCD01042015;AGCD01042016;GBCE01160197;XM_005393293;XM_005393294;XM_013518805 XP_005393350;XP_005393351;XP_013374259 MODEL 9059103 protein-coding Ift172 intraflagellar transport 172 ENCODES a protein that exhibits transcription factor binding (ortholog); INVOLVED IN bone development (ortholog); brain development (ortholog); cilium assembly (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); atrioventricular septal defect (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle A (ortholog); intraciliary transport particle B (ortholog) NW_004955469 9418599 9455026 - 102004921 AGCD01052503;GBDJ01229225;XM_005400503;XM_013522663 XP_005400560;XP_013378117 MODEL 9039057 protein-coding LOC102013566 uncharacterized LOC102013566 NW_004955448 17433598 17833238 + 102013566 AGCD01041719;AGCD01041720;AGCD01041721;AGCD01041722;AGCD01041723;AGCD01041724;AGCD01041725;AGCD01041726;GBDI01112397;XM_005393168;XM_013518622;XM_013518623;XR_001235774;XR_001235775;XR_001235776;XR_001235777;XR_001235778;XR_001235779 XP_005393225;XP_013374076;XP_013374077 MODEL 8932351 ncrna LOC102011165 uncharacterized LOC102011165 NW_004955403 10472232 10477715 + 102011165 AGCD01001922;GBDF01249569;XR_259169 MODEL 8718409 ncrna LOC102008515 uncharacterized LOC102008515 NW_004955412 14935574 14945274 - 102008515 AGCD01012863;GBCQ01079249;XR_259995 MODEL 9066615 ncrna LOC102019286 uncharacterized LOC102019286 NW_004955494 7882189 7889175 + 102019286 AGCD01061558;GBDF01308021;XR_264121 MODEL 8885525 protein-coding LOC102009273 tripartite motif-containing protein 34 NW_004955414 21592178 21600802 + 102009273 AGCD01015423;AGCD01015424;GBDI01215595;XM_005380097;XM_005380098;XM_013512000;XM_013512001 XP_005380154;XP_005380155;XP_013367454;XP_013367455 MODEL 39131845 rrna 5S_rRNA 5S ribosomal RNA 8725136 protein-coding Ankrd34a ankyrin repeat domain 34A ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955568 130062 134841 + 102029568 AGCD01074503;GBCB01063737;XM_005413420;XM_005413421 XP_005413477;XP_005413478 MODEL 8820980 protein-coding Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); calcium ion binding (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN cell chemotaxis (ortholog); cellular response to cadmium ion (ortholog); cellular response to estradiol stimulus (ortholog); ASSOCIATED WITH Birth Weight (ortholog); Cadmium Poisoning (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN extracellular space (ortholog) NW_004955417 25308424 25384307 - 102007119 AGCD01018478;AGCD01018479;GBCE01135046;XM_005381910;XM_005381911;XM_005381912;XM_013512836 XP_005381967;XP_005381968;XP_005381969;XP_013368290 MODEL 8790356 protein-coding LOC102003821 HLA class I histocompatibility antigen, B-14 alpha chain-like NW_004955583 520916 524888 + 102003821 AGCD01075833;AGCD01075834;GBBH01118053;XM_013509777 XP_013365231 MODEL 8931945 protein-coding Dad1 defender against cell death 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN blastocyst development (ortholog); glycoprotein biosynthetic process (ortholog); negative regulation of apoptotic process (ortholog); FOUND IN oligosaccharyltransferase complex (ortholog); oligosaccharyltransferase complex A (ortholog); oligosaccharyltransferase complex B (ortholog) NW_004955409 37670266 37688226 + 102008385 AGCD01010533;GBDF01006584;XM_005377131;XM_013510454 XP_005377188;XP_013365908 MODEL 8842927 protein-coding Grap2 GRB2 related adaptor protein 2 ASSOCIATED WITH Anaphylaxis (ortholog); hepatitis C (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome (ortholog) NW_004955413 25691824 25758461 + 102005694 AGCD01014412;GBDK01235103;XM_005379302;XM_005379304;XM_013511605;XM_013511606 XP_005379359;XP_005379361;XP_013367059;XP_013367060 MODEL 8849079 ncrna LOC102015375 uncharacterized LOC102015375 NW_004955407 23626174 23638539 - 102015375 AGCD01007431;XR_259578 MODEL 9012822 pseudo LOC102021782 protein numb homolog pseudogene NW_004955425 17697019 17721168 + 102021782 AGCD01025645;AGCD01025646;AGCD01025647;AGCD01025648 MODEL 39131530 protein-coding BTBD9 BTB domain containing 9 8862413 protein-coding Ddx39a DExD-box helicase 39A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of innate immune response (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955415 33021976 33030479 - 102015629 AGCD01016746;GBCE01054769;XM_005381099;XM_005381100;XM_005381101 XP_005381156;XP_005381157;XP_005381158 MODEL 39134052 misc_rna 7SK 7SK RNA 8813783 protein-coding Hsp90ab1 heat shock protein 90 alpha family class B member 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent protein binding (ortholog); CTP binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to interleukin-4 (ortholog); chaperone-mediated protein complex assembly (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH Female Infertility (ortholog); human immunodeficiency virus infectious disease (ortholog); intrahepatic cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); aryl hydrocarbon receptor complex (ortholog); axonal growth cone (ortholog) NW_004955437 9872649 9878459 + 102020377 AGCD01034548;GBDK01013019;XM_005389809;XM_013516839 XP_005389866;XP_013372293 MODEL 8907303 ncrna LOC102020289 uncharacterized LOC102020289 NW_004955441 9225389 9274569 - 102020289 AGCD01037015;XR_262062 MODEL 8754239 pseudo LOC102016551 60S ribosomal protein L12-like NW_004955403 47273269 47306341 - 102016551 AGCD01002884;AGCD01002885;XR_259282 MODEL 8779963 pseudo LOC102011593 tripartite motif-containing protein 44 pseudogene NW_004955441 5319595 5320576 + 102011593 AGCD01036876 MODEL 39132043 rrna 5S_rRNA 5S ribosomal RNA 9023645 protein-coding LOC102016163 vacuolar fusion protein MON1 homolog B-like NW_004955484 1024204 1028196 + 102016163 AGCD01057913;GBDF01195683;XM_005403432;XM_005403433;XM_013503991 XP_005403489;XP_005403490;XP_013359445 MODEL 8826537 pseudo LOC102008170 40S ribosomal protein S18-like NW_004955617 165313 165780 + 102008170 AGCD01077271 MODEL 8870444 protein-coding LOC102014278 smad nuclear-interacting protein 1-like NW_004955433 17532271 17555122 - 102014278 AGCD01031821;AGCD01031822;XM_013516108 XP_013371562 MODEL 8989125 protein-coding LOC102009665 antileukoproteinase NW_004955445 12093023 12095345 + 102009665 AGCD01039735;GBDI01080100;XM_013518386 XP_013373840 MODEL 9066635 protein-coding LOC102020634 beclin-2-like NW_004955406 38072602 38073867 + 102020634 AGCD01006588;XM_013503274 XP_013358728 MODEL 8836659 protein-coding LOC102012009 ferritin-1 heavy chain-like NW_004955427 216126 219395 - 102012009 AGCD01026814;XM_005386602 XP_005386659 MODEL 8819711 protein-coding LOC102019287 olfactory receptor 7E24-like NW_004955495 533469 599025 - 102019287 AGCD01061635;AGCD01061636;AGCD01061637;AGCD01061638;AGCD01061639;AGCD01061640;AGCD01061641;AGCD01061642;GBDF01039324;XM_005405558 XP_005405615 MODEL 8718522 ncrna LOC102012794 uncharacterized LOC102012794 NW_004955515 468692 476022 + 102012794 AGCD01067199;GBDF01281122;XR_264518 MODEL 8795894 protein-coding Fcamr Fc alpha and mu receptor ENCODES a protein that exhibits IgA binding (ortholog); IgM binding (ortholog); transmembrane signaling receptor activity (ortholog) NW_004955406 42484811 42518714 - 102023978 AGCD01006708;AGCD01006709;AGCD01006710;AGCD01006711;GBDI01141073;XM_005375409;XM_013502773;XM_013502777;XM_013502781 XP_005375466;XP_013358227;XP_013358231;XP_013358235 MODEL 9007174 protein-coding Ankrd34b ankyrin repeat domain 34B FOUND IN cytosol (ortholog) NW_004955418 29312312 29322572 + 102015011 AGCD01019457;XM_005382317;XM_013513049;XM_013513050 XP_005382374;XP_013368503;XP_013368504 MODEL 9021468 pseudo LOC102021030 cell division control protein 42 homolog NW_004955428 24153927 24154549 + 102021030 AGCD01028249 MODEL 8849987 ncrna LOC102015785 uncharacterized LOC102015785 NW_004955445 5422871 5426158 + 102015785 AGCD01039470;GBDF01074614;XR_001235565;XR_262304 MODEL 8847213 protein-coding Kcnk13 potassium two pore domain channel subfamily K member 13 ENCODES a protein that exhibits identical protein binding (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN regulation of excitatory synapse pruning (ortholog); regulation of NLRP3 inflammasome complex assembly (ortholog); regulation of resting membrane potential (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955438 12522063 12660078 + 102012362 AGCD01035260;AGCD01035261;AGCD01035262;AGCD01035263;AGCD01035264;AGCD01035265;GBDF01224037;XM_005390280 XP_005390337 MODEL 9038680 protein-coding Acadm acyl-CoA dehydrogenase medium chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); identical protein binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Congenital Hydrocephalus 2, with or without Brain or Eye Anomalies (ortholog); genetic disease (ortholog); Liver Failure (ortholog); FOUND IN axon (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) NW_004955423 17173648 17199189 - 102025477 AGCD01023847;GBCQ01008487;XM_005385228 XP_005385285 MODEL 8868002 protein-coding Dag1 dystroglycan 1 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); dystroglycan binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); axon regeneration (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2P (ortholog); bronchopulmonary dysplasia (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955532 1446553 1465310 + 102014285 AGCD01070188;AGCD01070189;GBBH01117057;GBDK01089592;XM_005410205 XP_005410262 MODEL 8713097 protein-coding CUNH19orf18 chromosome unknown C19orf18 homolog ASSOCIATED WITH substance-related disorder (ortholog) NW_004955584 682191 690357 - 102027474 AGCD01075955;GBDF01260757;XM_013509846 XP_013365300 MODEL 9035208 pseudo LOC102008897 60S ribosomal protein L36a-like NW_004955550 1877604 1877922 - 102008897 AGCD01072592 MODEL 8889264 protein-coding Cpsf3 cleavage and polyadenylation specific factor 3 ENCODES a protein that exhibits 5'-3' RNA exonuclease activity (ortholog); metal ion binding (ortholog); RNA binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Neurodevelopmental Disorder with Hypotonia, Microcephaly, and Seizures (ortholog); neurodevelopmental disorder with microcephaly, hypotonia, nystagmus, and seizures (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog) NW_004955487 5146541 5170077 + 102023041 AGCD01059322;GBBH01140067;XM_005404394 XP_005404451 MODEL 8858507 protein-coding Ift20 intraflagellar transport 20 ENCODES a protein that exhibits opsin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); centrosome localization (ortholog); cilium assembly (ortholog); FOUND IN acrosomal vesicle (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955481 4799548 4807751 + 102007225 AGCD01056953;GBDF01089063;XM_005402762;XM_005402763;XM_005402764;XM_005402766;XM_005402767 XP_005402819;XP_005402820;XP_005402821;XP_005402823;XP_005402824 MODEL 8881260 protein-coding LOC102011167 glycosyltransferase-like protein LARGE1 NW_004955650 55837 106695 - 102011167 AGCD01077795;AGCD01077796;AGCD01077797;AGCD01077798;AGCD01077799;GBDF01278631;GBDI01324495;XM_005415053 XP_005415110 MODEL 8795245 protein-coding Cimip1 ciliary microtubule inner protein 1 FOUND IN cilium (ortholog) NW_004955445 1360659 1370748 - 102029132 AGCD01039338;GBBH01003777;XM_005392246 XP_005392303 MODEL 39134357 misc_rna 7SK 7SK RNA 8959329 protein-coding LOC102013908 interferon-inducible GTPase 1-like NW_004955408 2319577 2332098 - 102013908 AGCD01008004;AGCD01008005;AGCD01008006;GBDK01196295;XM_005376045;XM_013508135 XP_005376102;XP_013363589 MODEL 39131846 rrna 5S_rRNA 5S ribosomal RNA 9066282 protein-coding LOC102017670 zinc finger protein 709-like NW_004955421 8318637 8347417 - 102017670 AGCD01021806;AGCD01021807;GBDI01254648;XM_013513784;XM_013513785;XM_013513786;XM_013513787 XP_013369238;XP_013369239;XP_013369240;XP_013369241 MODEL 8742739 ncrna LOC102003823 uncharacterized LOC102003823 NW_004955403 768478 771303 + 102003823 AGCD01001708;GBDI01035702;XR_259130 MODEL 8917527 protein-coding LOC102015378 uncharacterized LOC102015378 NW_004955456 15179606 15184141 + 102015378 AGCD01046663;GBCE01179145;XM_013520598;XR_262907;XR_262908 XP_013376052 MODEL 8892207 protein-coding Jagn1 jagunal vesicle mediated transporter 1 INVOLVED IN defense response to fungus (ortholog); granulocyte colony-stimulating factor signaling pathway (ortholog); insulin metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); neutropenia (ortholog); severe congenital neutropenia (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955561 1388592 1392107 + 102013767 AGCD01073854;GBBH01205209;XM_005413051;XM_013509092 XP_005413108;XP_013364546 MODEL 8898410 protein-coding Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 ENCODES a protein that exhibits bis(5'-adenosyl)-pentaphosphatase activity (ortholog); bis(5'-adenosyl)-triphosphatase activity (ortholog); bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); basophil activation involved in immune response (ortholog); inorganic diphosphate transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955436 12310773 12384815 + 102019951 AGCD01033838;AGCD01033839;AGCD01033840;GBDK01141658;XM_005389205;XM_005389206 XP_005389262;XP_005389263 MODEL 8818974 ncrna LOC102021786 uncharacterized LOC102021786 NW_004955429 22132995 22153413 + 102021786 AGCD01029018;AGCD01029019;AGCD01029020;GBDI01041468;XR_001234463;XR_001234464;XR_001234465 MODEL 10240862 ncrna LOC106149952 uncharacterized LOC106149952 NW_004955458 4169038 4171209 + 106149952 AGCD01047379;GBDI01045785;XR_001236445 MODEL 8922599 protein-coding Csrp1 cysteine and glycine rich protein 1 INVOLVED IN platelet aggregation (ortholog); ASSOCIATED WITH endometrial hyperplasia (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleus (ortholog) NW_004955406 37595481 37615384 - 102016343 AGCD01006576;GBCQ01010741;XM_005375184 XP_005375241 MODEL 9040228 protein-coding Diablo diablo IAP-binding mitochondrial protein INVOLVED IN apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 64 (ortholog); brain ischemia (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955482 6354502 6364424 + 102007662 AGCD01057387;GBCE01031683;GBDK01080617;XM_005403097 XP_005403154 MODEL 8768286 protein-coding Eif1ax eukaryotic translation initiation factor 1A X-linked INVOLVED IN ribosome assembly (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH multiple myeloma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN eukaryotic 43S preinitiation complex (ortholog); eukaryotic 48S preinitiation complex (ortholog); multi-eIF complex (ortholog) NW_004955509 577975 594028 - 102006801 AGCD01065937;GBBH01065130;XM_005407808 XP_005407865 MODEL 8775840 protein-coding Il4 interleukin 4 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN B cell costimulation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to mercury ion (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-12 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Hepatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955408 4058052 4065999 + 102015609 AGCD01008086;XM_013507371 XP_013362825 MODEL 8819082 protein-coding LOC102024511 disintegrin and metalloproteinase domain-containing protein 20 NW_004955552 2217959 2237548 - 102024511 AGCD01072806;GBDF01081593;XM_005412207;XM_005412208;XM_005412209 XP_005412264;XP_005412265;XP_005412266 MODEL 8744945 pseudo LOC102016165 casein kinase II subunit alpha-like NW_004955486 552614 556089 + 102016165 AGCD01058861 MODEL 9059379 protein-coding LOC102016553 phospholipase A2, membrane associated-like NW_004955452 661878 666147 - 102016553 AGCD01043822;GBDI01323160;XM_005394673;XM_013519731 XP_005394730;XP_013375185 MODEL 8852360 protein-coding LOC102005641 sialic acid-binding Ig-like lectin 13 NW_004955558 974508 988735 + 102005641 AGCD01073408;AGCD01073409;GBBH01177448;XM_013508883 XP_013364337 MODEL 9026361 protein-coding CUNH19orf25 chromosome unknown C19orf25 homolog NW_004955495 6461082 6464720 + 102030438 AGCD01062082;GBCE01169384;XM_005405964 XP_005406021 MODEL 9028073 protein-coding Drc11l dynein regulatory complex subunit 11 like NW_004955491 5609898 5623160 - 102003145 AGCD01060492;AGCD01060493;GBDF01085124;XM_013504573 XP_013360027 MODEL 8738120 protein-coding LOC102013195 ankyrin repeat domain-containing protein 26-like NW_004955429 20924084 20973447 - 102013195 AGCD01028992;AGCD01028993;GBDF01158703;GBDF01251273;XM_013515561;XR_001234544;XR_001234545 XP_013371015 MODEL 8864746 protein-coding LOC102007770 olfactory receptor 2T27-like NW_004955418 29729166 29730179 + 102007770 AGCD01019481;XM_005382359 XP_005382416 MODEL 8806191 protein-coding Erich6 glutamate rich 6 FOUND IN nucleus (ortholog) NW_004955448 1827296 1860699 - 102025958 AGCD01041270;GBDF01054023;XM_005393013;XM_013518579 XP_005393070;XP_013374033 MODEL 8795519 protein-coding LOC102010393 uncharacterized LOC102010393 NW_004955428 1963436 1974145 + 102010393 AGCD01027626;GBBH01018275;XM_005386840 XP_005386897 MODEL 8973920 protein-coding LOC102009673 E3 ubiquitin-protein ligase UHRF1 NW_004955777 1489 17093 + 102009673 AGCD01078327;GBDF01156556;GBDF01156558;XM_005415110 XP_005415167 MODEL 10282525 pseudo LOC102014677 uncharacterized LOC102014677 NW_004955487 21809 29103 - 102014677 AGCD01059204 MODEL 8952189 protein-coding LOC102013196 olfactory receptor 5AK2-like NW_004955511 2103315 2104244 + 102013196 AGCD01066391;XM_005407983 XP_005408040 MODEL 8914152 pseudo LOC102013568 anaphase-promoting complex subunit 15 pseudogene NW_004955450 3337411 3337795 + 102013568 AGCD01042429 MODEL 39134053 misc_rna 7SK 7SK RNA 8843429 pseudo LOC102021031 cleavage and polyadenylation specificity factor subunit 5-like NW_004955429 7449724 7450753 - 102021031 AGCD01028596 MODEL 8921351 ncrna LOC102015791 uncharacterized LOC102015791 NW_004955449 10622348 10629138 - 102015791 AGCD01042072;GBDI01352231;XR_262496 MODEL 8762819 protein-coding Ddx39b DExD-box helicase 39B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on RNA (ortholog); ATP-dependent protein binding (ortholog); INVOLVED IN liver development (ortholog); mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; spliceosome pathway; ASSOCIATED WITH type 1 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955437 72835 84045 - 102009541 AGCD01034101;GBCE01002580;XM_013516925;XM_013516926 XP_013372379;XP_013372380 MODEL 39133773 misc_rna 7SK 7SK RNA 39132044 rrna 5S_rRNA 5S ribosomal RNA 8848976 ncrna LOC102009277 uncharacterized LOC102009277 NW_004955474 12346167 12355317 - 102009277 AGCD01054658;GBDK01287845;XR_001230737;XR_001230738 MODEL 8870419 ncrna LOC102011598 uncharacterized LOC102011598 NW_004955567 1211454 1212041 + 102011598 AGCD01074462;GBDF01038351;XR_265029 MODEL 8902891 pseudo LOC102011168 telomeric repeat-binding factor 1 pseudogene NW_004957891 76 1145 - 102011168 AGCD01081287 MODEL 8793029 protein-coding Cpsf4 cleavage and polyadenylation specific factor 4 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog) NW_004955460 15111624 15128243 + 102007866 AGCD01048768;GBDJ01276706;XM_005397938;XM_005397940;XM_005397941 XP_005397995;XP_005397997;XP_005397998 MODEL 8745881 protein-coding Grb10 growth factor receptor bound protein 10 ENCODES a protein that exhibits identical protein binding (ortholog); insulin receptor binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); gene expression (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955456 3405730 3508967 + 102026718 AGCD01046272;AGCD01046273;AGCD01046274;AGCD01046275;AGCD01046276;GBBH01164509;XM_005396599;XM_005396600;XM_013520627 XP_005396656;XP_005396657;XP_013376081 MODEL 39134358 misc_rna 7SK 7SK RNA 39131847 rrna 5S_rRNA 5S ribosomal RNA 8887328 protein-coding LOC102020636 mucin-5AC NW_004955407 5064489 5191333 - 102020636 AGCD01006899;AGCD01006900;AGCD01006901;AGCD01006902;AGCD01006903;AGCD01006904;AGCD01006905;AGCD01006906;AGCD01006907;GBDF01010817;XM_005375519;XM_005375520;XM_005375521;XM_005375522;XM_005375523;XM_005375524;XM_005375525 XP_005375576;XP_005375577;XP_005375578;XP_005375579;XP_005375580;XP_005375581;XP_005375582 MODEL 9038990 protein-coding Cimip2a ciliary microtubule inner protein 2A INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); ciliary basal body (ortholog); sperm flagellum (ortholog) NW_004955513 5239239 5245859 - 102011572 AGCD01066963;AGCD01066964;GBDK01308056;XM_005408608 XP_005408665 MODEL 9059226 protein-coding Btc betacellulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN epidermal growth factor receptor signaling pathway (ortholog); ERBB2-EGFR signaling pathway (ortholog); ERBB4-ERBB4 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH erythropoietic protoporphyria (ortholog); Experimental Diabetes Mellitus (ortholog); Glucagonoma (ortholog); FOUND IN extracellular space (ortholog) NW_004955474 895573 946152 - 102007545 AGCD01054231;AGCD01054232;GBCB01020646;XM_005401314 XP_005401371 MODEL 8956268 protein-coding Erich6b glutamate rich 6B NW_004955518 3279721 3333159 - 102028567 AGCD01067798;AGCD01067799;GBDF01120562;XM_013506952 XP_013362406 MODEL 8735252 ncrna LOC102020291 uncharacterized LOC102020291 NW_004955442 10175563 10177047 - 102020291 AGCD01037700;GBDF01127172;XR_262131;XR_262132;XR_262133 MODEL 8718567 protein-coding Ankrd34c ankyrin repeat domain 34C NW_004955533 311863 320185 + 102014083 AGCD01070314;XM_005410382;XM_005410383 XP_005410439;XP_005410440 MODEL 9066864 protein-coding LOC102003827 beta-defensin 130-like NW_004955403 53263393 53266892 - 102003827 AGCD01003047;GBDF01142643;XM_005373831 XP_005373888 MODEL 8773434 protein-coding Hsp90b1 heat shock protein 90 beta family member 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); ATP-dependent protein folding chaperone (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN actin rod assembly (ortholog); cellular response to ATP (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH Diabetic Cardiomyopathies (ortholog); Kidney Reperfusion Injury (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) NW_004955405 38629691 38645202 + 102007730 AGCD01005482;GBDK01018798;XM_005374578 XP_005374635 MODEL 8866355 pseudo LOC102009680 60S ribosomal protein L13a pseudogene NW_004955452 571667 572274 - 102009680 AGCD01043817;AGCD01043818 MODEL 8877881 pseudo LOC102008902 nucleolar protein 58 pseudogene NW_004955446 12111400 12115335 + 102008902 AGCD01040224;AGCD01040225 MODEL 8744839 protein-coding Dagla diacylglycerol lipase alpha ENCODES a protein that exhibits hydrolase activity (ortholog); monoacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); diacylglycerol catabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN dendrite membrane (ortholog); dendritic spine membrane (ortholog); early endosome membrane (ortholog) NW_004955511 5952134 5997280 - 102011893 AGCD01066594;GBDK01117691;XM_005408144;XM_013506495 XP_005408201;XP_013361949 MODEL 8881323 ncrna LOC102014678 uncharacterized LOC102014678 NW_004955489 1004762 1008051 - 102014678 AGCD01059825;GBBH01020819;XR_264013 MODEL 8821678 protein-coding Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 ENCODES a protein that exhibits bis(5'-adenosyl)-triphosphatase activity (ortholog); INVOLVED IN positive regulation of blood coagulation (ortholog); purine ribonucleoside catabolic process (ortholog) NW_004955437 11169778 11187544 + 102029793 AGCD01034569;GBDF01046277;XM_005389840;XM_005389841;XM_005389842;XM_005389843;XM_005389845;XM_013516974 XP_005389897;XP_005389898;XP_005389899;XP_005389900;XP_005389902;XP_013372428 MODEL 8768475 protein-coding LOC102014286 cancer/testis antigen 47A-like NW_004955534 877150 879824 - 102014286 AGCD01070476;GBDF01016690;XM_005410452 XP_005410509 MODEL 9005430 protein-coding Diaph1 diaphanous related formin 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); actin nucleation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 1 (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); benign neonatal seizures (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) NW_004955415 12156152 12272961 + 102007112 AGCD01016185;AGCD01016186;AGCD01016187;GBCQ01066059;XM_005380730;XM_005380731;XM_013512217;XM_013512218 XP_005380787;XP_005380788;XP_013367671;XP_013367672 MODEL 8846477 protein-coding Eif1b eukaryotic translation initiation factor 1B NW_004955420 29514067 29515362 - 102013617 AGCD01021508;GBDF01155369;GBDJ01141903;XM_005383580 XP_005383637 MODEL 39133793 misc_rna 7SK 7SK RNA 8743135 protein-coding Ift22 intraflagellar transport 22 FOUND IN centrosome (ortholog); cilium (ortholog); intraciliary transport particle A (ortholog) NW_004955456 15980412 15987573 + 102020763 AGCD01046681;GBDF01088462;XM_005396853;XM_005396854;XR_262912 XP_005396910;XP_005396911 MODEL 8775706 ncrna LOC102012010 uncharacterized LOC102012010 NW_004955506 6455233 6469865 - 102012010 AGCD01065423;AGCD01065424;AGCD01065425;AGCD01065426;GBDF01119360;XR_264363 MODEL 8995749 protein-coding LOC102012796 vomeronasal type-2 receptor 116-like NW_004955524 3477585 3506250 - 102012796 AGCD01068903;AGCD01068904;AGCD01068905;GBDJ01017969;XM_013507196 XP_013362650 MODEL 8702201 pseudo LOC102005642 T-complex protein 1 subunit theta pseudogene NW_004955443 13804351 13806658 - 102005642 AGCD01038484 MODEL 8774588 protein-coding CUNH19orf47 chromosome unknown C19orf47 homolog NW_004955578 905540 925570 + 102015359 AGCD01075500;AGCD01075501;AGCD01075502;GBCC01018259;XM_005414057;XM_005414058;XM_005414059;XM_005414061;XM_013509655;XM_013509656;XM_013509657 XP_005414114;XP_005414115;XP_005414116;XP_005414118;XP_013365109;XP_013365110;XP_013365111 MODEL 39134359 misc_rna 7SK 7SK RNA 8880409 protein-coding Fcer1a Fc fragment of IgE receptor Ia ENCODES a protein that exhibits high-affinity IgE receptor activity (ortholog); IgE binding (ortholog); IgE receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); eosinophil degranulation (ortholog); leukotriene biosynthetic process (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); drug allergy (ortholog); Drug Eruptions (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955468 11094792 11101191 + 102005696 AGCD01052114;GBCE01023162;XM_005400169;XM_013522280;XM_013522281 XP_005400226;XP_013377734;XP_013377735 MODEL 8912907 protein-coding Kcnk15 potassium two pore domain channel subfamily K member 15 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity (ortholog) NW_004955445 12604456 12610502 - 102016324 AGCD01039759;GBCE01185289;XM_005392465 XP_005392522 MODEL 8699899 protein-coding Acads acyl-CoA dehydrogenase short chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN butyrate catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH alcohol use disorder (ortholog); congestive heart failure (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955455 10928560 10942748 - 102019142 AGCD01045967;AGCD01045968;GBBH01207722;GBDF01118831;XM_013520359 XP_013375813 MODEL 8868119 ncrna LOC102020637 uncharacterized LOC102020637 NW_004955407 37887840 37893702 - 102020637 AGCD01007788;GBDF01123976;XR_001231276;XR_259619 MODEL 8983946 protein-coding LOC102013569 late cornified envelope protein 1C NW_004955592 613174 614854 - 102013569 AGCD01076320;GBDI01027737;XM_005414621 XP_005414678 MODEL 9063005 ncrna LOC102013197 uncharacterized LOC102013197 NW_004955430 2124248 2131815 - 102013197 AGCD01029152;AGCD01029153;GBCQ01086414;XR_261409 MODEL 8809835 ncrna LOC102011599 uncharacterized LOC102011599 NW_004955448 16625313 16631092 + 102011599 AGCD01041700;GBDF01305679;XR_001235757;XR_262473 MODEL 8940333 protein-coding LOC102016169 tumor necrosis factor receptor superfamily member 23-like NW_004955422 14853579 14865230 - 102016169 AGCD01022871;AGCD01022872;GBDF01266354;XM_013513880 XP_013369334 MODEL 8723832 protein-coding Ddx3x DEAD-box helicase 3 X-linked ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); CTPase activity (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); cellular response to osmotic stress (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH autistic disorder (ortholog); breast cancer (ortholog); cerebellar hypoplasia (ortholog); FOUND IN cell leading edge (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955565 1387043 1403624 - 102030251 AGCD01074316;AGCD01074317;GBCB01000529;XM_005413259 XP_005413316 MODEL 8701912 protein-coding Il4i1 interleukin 4 induced 1 ENCODES a protein that exhibits L-amino-acid oxidase activity (ortholog); INVOLVED IN L-phenylalanine catabolic process (ortholog); L-tryptophan catabolic process (ortholog); L-tyrosine catabolic process (ortholog); PARTICIPATES IN Canavan disease pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog); immunological synapse (ortholog) NW_004955559 1012634 1047051 + 102025183 AGCD01073626;GBDF01006554;XM_005412805;XM_005412806;XM_005412808;XM_013508954;XM_013508955;XM_013508956;XM_013508957;XM_013508958;XM_013508959;XM_013508960;XM_013508961;XM_013508962;XM_013508963;XM_013508964;XM_013508965 XP_005412862;XP_005412863;XP_005412865;XP_013364408;XP_013364409;XP_013364410;XP_013364411;XP_013364412;XP_013364413;XP_013364414;XP_013364415;XP_013364416;XP_013364417;XP_013364418;XP_013364419 MODEL 8759353 pseudo LOC102024514 small nuclear ribonucleoprotein Sm D2 pseudogene NW_004955560 616311 619707 + 102024514 AGCD01073733;XM_005412991 MODEL 8784600 protein-coding LOC102017677 olfactory receptor 18-like NW_004955495 442150 443091 - 102017677 AGCD01061630;XM_005405555 XP_005405612 MODEL 8962214 protein-coding LOC102021787 olfactory receptor 8K3-like NW_004955511 5111091 5112029 + 102021787 AGCD01066549;XM_013506405 XP_013361859 MODEL 8878070 pseudo LOC102015382 olfactory receptor 12-like NW_004955458 2288891 2292223 + 102015382 AGCD01047223 MODEL 8817542 protein-coding Eif2a eukaryotic translation initiation factor 2A ENCODES a protein that exhibits ribosome binding (ortholog); translation initiation factor activity (ortholog); tRNA binding (ortholog); INVOLVED IN positive regulation of signal transduction (ortholog); protein phosphorylation (ortholog); regulation of translation (ortholog); PARTICIPATES IN ceramide signaling pathway; endoplasmic reticulum stress - the unfolded protein response pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH borna disease (ortholog); dystonia 33 (ortholog); Marinesco-Sjogren syndrome (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog) NW_004955448 1743060 1781401 + 102025064 AGCD01041267;GBDF01156554;XM_005393010 XP_005393067 MODEL 8724624 protein-coding LOC102008516 epididymal secretory glutathione peroxidase NW_004955465 13787944 13795076 + 102008516 AGCD01050624;AGCD01050625;XM_005399016 XP_005399073 MODEL 10207427 ncrna LOC106149953 uncharacterized LOC106149953 NW_004955458 276608 281685 - 106149953 AGCD01047116;GBDF01116207;XR_001236446;XR_001236447 MODEL 9052013 pseudo LOC102010394 heterogeneous nuclear ribonucleoprotein K pseudogene NW_004955429 5495670 5504446 - 102010394 AGCD01028516;AGCD01028517 MODEL 8873610 protein-coding LOC102008171 exonuclease 3'-5' domain-containing protein 1-like NW_004956095 1189 6900 - 102008171 AGCD01079041;AGCD01079042;AGCD01079043;GBDJ01296153;GBDK01051647;XM_005415168 XP_005415225 MODEL 8862386 protein-coding Grb14 growth factor receptor bound protein 14 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphoprotein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); insulin receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH type 2 diabetes mellitus (ortholog); Weight Gain (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); plasma membrane (ortholog) NW_004955449 9466764 9589559 + 102014959 AGCD01042047;AGCD01042048;AGCD01042049;GBBH01077680;GBCE01008663;XM_013518791 XP_013374245 MODEL 8877449 ncrna LOC102021037 uncharacterized LOC102021037 NW_004955518 4085554 4088778 + 102021037 AGCD01067820;GBDF01082470;XR_001231841 MODEL 39134054 misc_rna 7SK 7SK RNA 8763719 protein-coding Csrp2 cysteine and glycine rich protein 2 INVOLVED IN myoblast differentiation (ortholog); ASSOCIATED WITH high grade glioma (ortholog) NW_004955405 16001568 16020642 - 102014859 AGCD01004959;AGCD01004960;GBCE01029256;XM_005374348 XP_005374405 MODEL 8940433 pseudo LOC102020295 mitochondrial uncoupling protein 2 pseudogene NW_004955442 19239377 19240202 - 102020295 AGCD01038044 MODEL 9059896 protein-coding Ankrd35 ankyrin repeat domain 35 NW_004955568 204422 222065 + 102004529 AGCD01074506;GBDF01010622;XM_005413430;XM_005413431;XM_005413432;XM_005413433 XP_005413487;XP_005413488;XP_005413489;XP_005413490 MODEL 8872202 protein-coding LOC102013915 cysteine-rich secretory protein 3-like NW_004955411 8193665 8203985 + 102013915 AGCD01011719;AGCD01011720;XM_005377928 XP_005377985 MODEL 39134360 misc_rna 7SK 7SK RNA 8955374 pseudo LOC102019289 cysteine-rich protein 2-binding protein pseudogene NW_004955423 1306040 1307293 - 102019289 AGCD01023432 MODEL 8966154 ncrna LOC102016554 uncharacterized LOC102016554 NW_004955404 11891642 11904435 - 102016554 AGCD01003446;AGCD01003447;XR_001234726 MODEL 9064359 protein-coding LOC102008903 prolactin-like NW_004955576 90664 96906 - 102008903 AGCD01075255;XM_005413945 XP_005414002 MODEL 8721741 pseudo LOC102007773 BAG family molecular chaperone regulator 5-like NW_004955484 8703188 8705376 + 102007773 AGCD01058394 MODEL 39134055 misc_rna 7SK 7SK RNA 8976668 protein-coding Enpp5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 ENCODES a protein that exhibits NAD+ diphosphatase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN cell communication (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 11195846 11204000 - 102003483 AGCD01034569;GBDF01153945;XM_005389846 XP_005389903 MODEL 8765754 ncrna LOC102014290 uncharacterized LOC102014290 NW_004955441 6783381 6790395 - 102014290 AGCD01036941;AGCD01036942;GBDF01251741;XR_262053 MODEL 8907317 protein-coding Daglb diacylglycerol lipase beta ENCODES a protein that exhibits lipase activity (ortholog); monoacylglycerol lipase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); icosanoid metabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 13226574 13268060 + 102021529 AGCD01048674;AGCD01048675;AGCD01048676;AGCD01048677;AGCD01048678;GBDK01146299;XM_005397891 XP_005397948 MODEL 8710011 protein-coding LOC102016171 olfactory receptor 7A17-like NW_004955495 8434964 8435920 + 102016171 AGCD01062208;XM_005406108 XP_005406165 MODEL 8953129 protein-coding Jak1 Janus kinase 1 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); growth hormone receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interleukin-3 (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; interleukin-2 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Autoinflammation, Immune Dysregulation, and Eosinophilia (ortholog); Chronic Hepatitis B (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955423 25501989 25581826 + 102025478 AGCD01024080;AGCD01024081;GBDF01083837;XM_005385305;XM_005385307;XM_005385308 XP_005385362;XP_005385364;XP_005385365 MODEL 39131848 rrna 5S_rRNA 5S ribosomal RNA 8736914 protein-coding Diaph2 diaphanous related formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); axon midline choice point recognition (ortholog); ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); primary ovarian insufficiency 2A (ortholog) NW_004955503 2324934 3132466 + 102018747 AGCD01064606;AGCD01064607;AGCD01064608;AGCD01064609;AGCD01064610;AGCD01064611;AGCD01064612;AGCD01064613;AGCD01064614;AGCD01064615;AGCD01064616;AGCD01064617;AGCD01064618;GBDI01105959;XM_013505853;XM_013505854 XP_013361307;XP_013361308 MODEL 8827423 protein-coding LOC102021788 major urinary protein-like NW_004955513 4818849 4823574 - 102021788 AGCD01066940;GBDK01223614;XM_005408549 XP_005408606 MODEL 8762622 pseudo LOC102003830 lysophospholipid acyltransferase LPCAT4 pseudogene NW_004955404 19109521 19111476 - 102003830 AGCD01003637 MODEL 39132045 rrna 5S_rRNA 5S ribosomal RNA 8860734 pseudo LOC102009279 60S ribosomal protein L34 pseudogene NW_004955477 5072715 5073707 + 102009279 AGCD01055590 MODEL 8860097 ncrna LOC102009682 uncharacterized LOC102009682 NW_004955453 7009688 7017214 + 102009682 AGCD01044736;XR_001236192 MODEL 8910008 protein-coding Hspa12a heat shock protein family A (Hsp70) member 12A INVOLVED IN import into nucleus (ortholog); inflammatory response (ortholog); liver development (ortholog); ASSOCIATED WITH substance-related disorder (ortholog) NW_004955431 21464578 21625979 - 102025937 AGCD01030496;GBBH01046958;XM_005387861;XM_005387862;XM_005387863;XM_005387864;XM_005387865;XM_013515841;XM_013515842 XP_005387918;XP_005387919;XP_005387920;XP_005387921;XP_005387922;XP_013371295;XP_013371296 MODEL 8893104 pseudo LOC102014681 LYR motif-containing protein 1 pseudogene NW_004955422 14848716 14849710 - 102014681 AGCD01022871 MODEL 8982095 protein-coding Grb2 growth factor receptor bound protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); anatomical structure formation involved in morphogenesis (ortholog); B cell receptor signaling pathway (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH breast cancer (ortholog); endometrial carcinoma (ortholog); prostate adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cell-cell junction (ortholog); COP9 signalosome (ortholog) NW_004955553 2186590 2258964 - 102026679 AGCD01072930;AGCD01072931;AGCD01072932;AGCD01072933;GBDK01071707;XM_005412295 XP_005412352 MODEL 8781360 ncrna LOC102011604 uncharacterized LOC102011604 NW_004955592 442424 444289 + 102011604 AGCD01076315;GBDF01289807;XR_265137 MODEL 8794080 ncrna LOC102012013 uncharacterized LOC102012013 NW_004955431 310644 317292 - 102012013 AGCD01029865;GBDK01414667;XR_261437 MODEL 8719921 ncrna LOC102012800 uncharacterized LOC102012800 NW_004955436 20441094 20445316 - 102012800 AGCD01034024;GBCB01036539;XR_261802 MODEL 8964625 protein-coding LOC102005646 zinc finger protein 136-like NW_004955569 1261038 1282057 - 102005646 AGCD01074645;GBDI01011361;XM_005413498;XM_013509376 XP_005413555;XP_013364830 MODEL 8747479 protein-coding Ift25 intraflagellar transport 25 INVOLVED IN cilium assembly (ortholog); heart development (ortholog); kidney development (ortholog); ASSOCIATED WITH renal agenesis (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); intraciliary transport particle A (ortholog) NW_004955464 5299206 5324136 + 102007636 AGCD01050004;GBDF01224459;XM_005398544;XM_005398545;XM_005398546;XM_005398547;XM_005398549;XM_005398550;XM_013521718;XM_013521719 XP_005398601;XP_005398602;XP_005398603;XP_005398604;XP_005398606;XP_005398607;XP_013377172;XP_013377173 MODEL 8875025 protein-coding Btd biotinidase ENCODES a protein that exhibits biotinidase activity (ortholog); INVOLVED IN biotin metabolic process (ortholog); PARTICIPATES IN biotin metabolic pathway; biotinidase deficiency pathway; holocarboxylase synthetase deficiency pathway; ASSOCIATED WITH autistic disorder (ortholog); biotin deficiency (ortholog); biotinidase deficiency (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog); nucleolus (ortholog) NW_004955430 7960036 7988754 + 102022111 AGCD01029378;GBDF01001926;XM_005387438;XM_005387439;XM_005387440;XM_005387441;XM_005387442;XM_005387443;XM_013515701;XM_013515702 XP_005387495;XP_005387496;XP_005387497;XP_005387498;XP_005387499;XP_005387500;XP_013371155;XP_013371156 MODEL 8904424 protein-coding Erlec1 endoplasmic reticulum lectin 1 ENCODES a protein that exhibits unfolded protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955441 19535425 19557960 + 102003697 AGCD01037349;AGCD01037350;AGCD01037351;AGCD01037352;GBBH01065712;GBDJ01003705;XM_013517526 XP_013372980 MODEL 10140019 protein-coding LOC106149954 translation initiation factor IF-2-like NW_004955458 329439 331047 - 106149954 AGCD01047119;GBBH01141876;GBDK01081827;XM_013520875 XP_013376329 MODEL 8944727 ncrna LOC102015792 uncharacterized LOC102015792 NW_004955588 264857 272070 + 102015792 AGCD01076099;AGCD01076100;GBCB01027579;XR_265117 MODEL 8974430 protein-coding Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 ENCODES a protein that exhibits eukaryotic translation initiation factor 2alpha kinase activity (ortholog); heme binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); HRI-mediated signaling (ortholog); integrated stress response signaling (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Chemical and Drug Induced Liver Injury (ortholog); hemolytic anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955460 13723674 13754545 + 102024314 AGCD01048720;AGCD01048721;AGCD01048722;GBBH01142818;XM_005397898;XM_005397899 XP_005397955;XP_005397956 MODEL 8906293 protein-coding Fcer1g Fc fragment of IgE receptor Ig ENCODES a protein that exhibits identical protein binding (ortholog); IgE binding (ortholog); IgE receptor activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH drug allergy (ortholog); Experimental Liver Cirrhosis (ortholog); Genetic Predisposition to Disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); Fc-epsilon receptor I complex (ortholog) NW_004955468 12971931 12975206 + 102007326 AGCD01052194;GBDK01019203;XM_005400269 XP_005400326 MODEL 9019891 pseudo LOC102011172 translationally-controlled tumor protein pseudogene NW_004955405 31816779 31817304 - 102011172 AGCD01005306;XM_005374671 MODEL 8800213 protein-coding Drc12 dynein regulatory complex subunit 12 homolog ENCODES a protein that exhibits identical protein binding (ortholog) NW_004955412 20292619 20297902 - 102003425 AGCD01013003;GBBH01187565;XM_005378322;XM_005378323;XM_005378326;XM_013511089;XM_013511090;XM_013511091;XM_013511092 XP_005378379;XP_005378380;XP_005378383;XP_013366543;XP_013366544;XP_013366545;XP_013366546 MODEL 8703550 ncrna LOC102005651 uncharacterized LOC102005651 NW_004955449 5758290 5762221 + 102005651 AGCD01041942;XR_262490 MODEL 8765741 ncrna LOC102013571 uncharacterized LOC102013571 NW_004955450 15353511 15354490 + 102013571 AGCD01042789;GBCQ01060641;XR_262557 MODEL 8760721 protein-coding Kcnk18 potassium two pore domain channel subfamily K member 18 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to pH (ortholog); potassium ion export across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH migraine (ortholog); FOUND IN plasma membrane (ortholog) NW_004955431 21916587 21927346 + 102020041 AGCD01030506;XM_005387909 XP_005387966 MODEL 8970439 pseudo LOC102024515 ORM1-like protein 1 pseudogene NW_004955446 6139115 6140325 + 102024515 AGCD01040088 MODEL 8807482 ncrna LOC102013917 uncharacterized LOC102013917 NW_004955466 8471679 8498163 + 102013917 AGCD01050989;AGCD01050990;GBDK01117754;XR_001236825;XR_263297 MODEL 8837483 protein-coding Cpsf6 cleavage and polyadenylation specific factor 6 ENCODES a protein that exhibits exon-exon junction complex binding (ortholog); mRNA binding (ortholog); ribosomal large subunit binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA alternative polyadenylation (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN cytoplasm (ortholog); interchromatin granule (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog) NW_004955458 15684040 15708011 + 102011410 AGCD01047909;GBCQ01099378;GBDK01231100;XM_013520974;XM_013520975;XM_013520976 XP_013376428;XP_013376429;XP_013376430 MODEL 9002231 protein-coding Il4r interleukin 4 receptor ENCODES a protein that exhibits interleukin-4 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-13-mediated signaling pathway (ortholog); interleukin-4-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); allergic conjunctivitis (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog); receptor complex (ortholog) NW_004955493 5546340 5580745 + 102006675 AGCD01061070;AGCD01061071;GBDJ01082206;XM_005405137 XP_005405194 MODEL 8739981 ncrna LOC102008517 uncharacterized LOC102008517 NW_004955412 20462018 20473633 + 102008517 AGCD01013009;GBDF01220421;XR_260003 MODEL 9000120 pseudo LOC102010397 forkhead box protein H1 pseudogene NW_004955431 1005823 1006729 - 102010397 AGCD01029888 MODEL 8765715 protein-coding CUNH19orf67 chromosome unknown C19orf67 homolog NW_004955415 32785472 32789328 - 102010998 AGCD01016733;GBDF01089684;XM_005381086 XP_005381143 MODEL 9017286 pseudo LOC102020640 F-actin-capping protein subunit alpha-2 pseudogene NW_004955464 8171466 8172795 + 102020640 AGCD01050084 MODEL 8816853 pseudo LOC102021038 WD repeat-containing protein 20 pseudogene NW_004955521 639238 759184 + 102021038 AGCD01068140;AGCD01068141;AGCD01068142;AGCD01068143;AGCD01068144;AGCD01068145;AGCD01068146 MODEL 8881021 protein-coding LOC102008175 translation initiation factor IF-2-like NW_004955451 5786082 5786923 - 102008175 AGCD01043175;GBCQ01165193;GBDJ01098516;XM_013519403 XP_013374857 MODEL 8758065 protein-coding Diaph3 diaphanous related formin 3 ENCODES a protein that exhibits actin binding (ortholog); cytoskeletal protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); ASSOCIATED WITH Auditory Neuropathy (ortholog); autosomal dominant auditory neuropathy 1 (ortholog); congenital dyserythropoietic anemia (ortholog); FOUND IN actin filament bundle (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955404 44653308 45106943 + 102005884 AGCD01004425;AGCD01004426;AGCD01004427;AGCD01004428;AGCD01004429;AGCD01004430;AGCD01004431;AGCD01004432;AGCD01004433;AGCD01004434;AGCD01004435;AGCD01004436;AGCD01004437;GBDF01248888;XM_005374208 XP_005374265 MODEL 9058373 protein-coding LOC102003832 UDP-glucuronosyltransferase 1-8-like NW_004955453 2647244 2648138 - 102003832 AGCD01044635;GBDJ01098935;XM_005395700 XP_005395757 MODEL 8729775 pseudo LOC102019293 elongation factor 1-beta pseudogene NW_004955424 22092321 22093115 - 102019293 AGCD01024931 MODEL 8842395 protein-coding LOC102009284 uncharacterized LOC102009284 NW_004955420 26735389 26736424 + 102009284 AGCD01021427;GBDF01043434;XM_005383475 XP_005383532 MODEL 8793979 pseudo LOC102009690 olfactory receptor 1361-like NW_004955408 1614860 1615787 + 102009690 AGCD01007967 MODEL 8828318 ncrna LOC102017678 uncharacterized LOC102017678 NW_004955423 6813818 6814536 - 102017678 AGCD01023587;GBDK01199497;XR_260958 MODEL 9038269 protein-coding Cimip2b ciliary microtubule inner protein 2B INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Meckel syndrome (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955472 695955 698086 + 102010689 AGCD01053351;GBDI01135534;XM_013522960;XM_013522961;XM_013522962;XM_013522963 XP_013378414;XP_013378415;XP_013378416;XP_013378417 MODEL 9064547 protein-coding Ddx4 DEAD-box helicase 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955446 11967222 12025537 - 102015061 AGCD01040220;AGCD01040221;AGCD01040222;GBDF01001983;XM_005392693;XM_005392694 XP_005392750;XP_005392751 MODEL 8742218 protein-coding LOC102013574 probable helicase senataxin NW_004955807 9139 18072 - 102013574 AGCD01078384;AGCD01078385;GBDJ01014667;XM_013510197 XP_013365651 MODEL 8795625 protein-coding LOC102014291 natural resistance-associated macrophage protein 2 NW_004955547 1495286 1524795 - 102014291 AGCD01072226;AGCD01072227;GBDJ01050751;XM_013508458 XP_013363912 MODEL 8927906 protein-coding LOC102005653 cytochrome c oxidase subunit 5A, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); mitochondrial complex IV deficiency nuclear type 20 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955450 3036387 3049121 + 102005653 AGCD01042420;GBCQ01008019;XM_005393528;XM_005393529 XP_005393585;XP_005393586 MODEL 9020822 pseudo LOC102016174 brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 pseudogene NW_004955502 7728610 7730040 - 102016174 AGCD01064460 MODEL 8825593 protein-coding Dalrd3 DALR anticodon binding domain containing 3 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN tRNA C3-cytosine methylation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 86 (ortholog) NW_004955532 1038861 1042362 - 102007589 AGCD01070162;AGCD01070163;GBDK01142248;XM_005410183 XP_005410240 MODEL 8807361 protein-coding Enpp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 ENCODES a protein that exhibits glycerophosphocholine cholinephosphodiesterase activity (ortholog); glycerophosphodiester phosphodiesterase activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN choline metabolic process (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955403 24528644 24788878 + 102007491 AGCD01002274;AGCD01002275;AGCD01002276;AGCD01002277;GBBH01100140;XM_005373495;XM_013513092;XM_013513095 XP_005373552;XP_013368546;XP_013368549 MODEL 8843895 protein-coding LOC102013198 olfactory receptor 1052-like NW_004955511 1015613 1016557 + 102013198 AGCD01066353;XM_005408221 XP_005408278 MODEL 39133794 misc_rna 7SK 7SK RNA 8821648 protein-coding Acadsb acyl-CoA dehydrogenase short/branched chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); electron transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); fatty acid metabolic process (ortholog); L-isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 2-Methylbutyryl-CoA Dehydrogenase Deficiency (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955477 1177704 1213347 + 102025788 AGCD01055503;GBCB01041775;XM_005401957 XP_005402014 MODEL 8831014 protein-coding Jak2 Janus kinase 2 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); growth hormone receptor binding (ortholog); heme binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); axon regeneration (ortholog); cell adhesion (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered Jak-Stat signaling pathway; angiotensin II signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN caveola (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955434 9227897 9341208 + 102028890 AGCD01032292;AGCD01032293;AGCD01032294;AGCD01032295;AGCD01032296;AGCD01032297;AGCD01032298;AGCD01032299;GBCB01056844;GBDJ01080996;XM_005388653 XP_005388710 MODEL 8955590 protein-coding Ankrd37 ankyrin repeat domain 37 FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955403 23655501 23658069 - 102028256 AGCD01002249;GBDI01027968;XM_005373469;XM_013513001 XP_005373526;XP_013368455 MODEL 39134361 misc_rna 7SK 7SK RNA 8755326 protein-coding Hspa12b heat shock protein family A (Hsp70) member 12B INVOLVED IN angiogenesis (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); pulmonary edema (ortholog) NW_004955415 14576956 14596135 + 102028958 AGCD01016300;GBDK01083773;XM_005380798;XM_005380799;XM_005380800 XP_005380855;XP_005380856;XP_005380857 MODEL 8845162 protein-coding LOC102021041 melanoma-associated antigen B10-like NW_004955531 3152723 3156891 - 102021041 AGCD01070062;AGCD01070063;GBDF01042268;XM_005410141 XP_005410198 MODEL 8930213 protein-coding LOC102020652 olfactory receptor 51G2 NW_004955414 20518042 20518983 - 102020652 AGCD01015378;XM_005380060 XP_005380117 MODEL 9040459 pseudo LOC102015385 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 13496374 13531311 - 102015385 AGCD01048692;AGCD01048693;AGCD01048694;AGCD01048695;AGCD01048696;AGCD01048697 MODEL 8721172 ncrna LOC102014682 uncharacterized LOC102014682 NW_004955422 20057801 20067907 - 102014682 AGCD01023063;AGCD01023064;GBBH01003567;XR_260899 MODEL 39134056 misc_rna 7SK 7SK RNA 8887094 protein-coding LOC102011607 3-beta-hydroxysteroid sulfotransferase-like NW_004955609 280400 319841 - 102011607 AGCD01077056;AGCD01077057;GBCB01061931;XM_005414930 XP_005414987 MODEL 39131849 rrna 5S_rRNA 5S ribosomal RNA 8964918 protein-coding LOC102012015 carboxylesterase 1D-like NW_004955433 13630963 13654307 - 102012015 AGCD01031696;GBDF01156979;XM_013516095;XM_013516096 XP_013371549;XP_013371550 MODEL 9048828 pseudo LOC102021796 ras-related protein Ral-A pseudogene NW_004955436 344054 347031 - 102021796 AGCD01033541 MODEL 8745741 protein-coding Ift27 intraflagellar transport 27 INVOLVED IN cochlea development (ortholog); inner ear receptor cell stereocilium organization (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 19 (ortholog); fundus dystrophy (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955413 23295549 23310824 - 102021645 AGCD01014329;GBCE01172334;XM_005379168;XM_013511657;XM_013511658;XM_013511659;XR_001233043 XP_005379225;XP_013367111;XP_013367112;XP_013367113 MODEL 8803342 protein-coding Il5 interleukin 5 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-5 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-4 signaling pathway; interleukin-5 signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); allergic contact dermatitis (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955408 3937128 3951784 - 102029937 AGCD01008083;GBDK01154528;XM_005376103;XR_001231944 XP_005376160 MODEL 39132046 rrna 5S_rRNA 5S ribosomal RNA 8992702 protein-coding Erlin1 ER lipid raft associated 1 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 62 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); protein-containing complex (ortholog) NW_004955507 6029247 6062946 - 102020593 AGCD01065695;GBDF01082079;XM_005407685;XM_005407686 XP_005407742;XP_005407743 MODEL 8786173 protein-coding Btf3 basic transcription factor 3 INVOLVED IN in utero embryonic development (ortholog); negative regulation of protein localization to endoplasmic reticulum (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955425 27099207 27105644 - 102007789 AGCD01025960;GBDF01008196;XM_005386072;XM_005386073 XP_005386129;XP_005386130 MODEL 8912876 protein-coding LOC102015388 cytochrome b5 reductase 4 ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); flavin adenine dinucleotide binding (ortholog); heme binding (ortholog); INVOLVED IN cell development (ortholog); glucose homeostasis (ortholog); insulin secretion (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955411 11424923 11508193 + 102015388 AGCD01011819;AGCD01011820;AGCD01011821;AGCD01011822;GBDI01325383;XM_005377692;XM_013510896 XP_005377749;XP_013366350 MODEL 8928053 protein-coding LOC102015798 DNA repair protein complementing XP-C cells-like NW_004956269 283 3940 + 102015798 AGCD01079352;XM_005415188 XP_005415245 MODEL 8720990 pseudo LOC102008519 mitochondrial import inner membrane translocase subunit TIM14-like NW_004955412 23530210 23530974 + 102008519 AGCD01013090 MODEL 8739573 protein-coding CUNH19orf81 chromosome unknown C19orf81 homolog NW_004955559 566878 575429 - 102015780 AGCD01073594;GBDF01050500;XM_005412774;XM_013508936 XP_005412831;XP_013364390 MODEL 8904594 protein-coding Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); eukaryotic translation initiation factor 2alpha kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to amino acid starvation (ortholog); endoplasmic reticulum unfolded protein response (ortholog); PARTICIPATES IN ceramide signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); Cardiovirus Infections (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955441 4908318 4944343 - 102011251 AGCD01036861;AGCD01036862;AGCD01036863;GBBH01062374;GBDJ01018096;XM_013517630 XP_013373084 MODEL 8870362 protein-coding LOC102011176 keratin-associated protein 20-2-like NW_004955407 30259322 30259501 + 102011176 AGCD01007630;XM_005375653 XP_005375710 MODEL 9053622 protein-coding LOC102020299 keratin, type I cytoskeletal 12 NW_004955451 15302354 15307688 - 102020299 AGCD01043604;AGCD01043605;GBCQ01166155;XM_005394376 XP_005394433 MODEL 8977515 pseudo LOC102007778 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955488 8069378 8071802 - 102007778 AGCD01059700 MODEL 8955337 protein-coding LOC102016559 C-X-C chemokine receptor type 2 NW_004955453 15227990 15234518 - 102016559 AGCD01044890;GBBH01201214;XM_005395667 XP_005395724 MODEL 8832642 protein-coding Fcer2 Fc fragment of IgE receptor II ENCODES a protein that exhibits IgE binding (ortholog); low-affinity IgE receptor activity (ortholog); protease binding (ortholog); INVOLVED IN B cell antigen processing and presentation (ortholog); defense response to bacterium (ortholog); Fc receptor-mediated immune complex endocytosis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH encephalitis (ortholog); human immunodeficiency virus infectious disease (ortholog); Immediate Hypersensitivity (ortholog); FOUND IN plasma membrane (ortholog) NW_004955563 1587471 1596707 + 102025629 AGCD01074153;GBBH01149979;XM_005413162;XM_013509156;XM_013509157;XM_013509158;XM_013509159;XM_013509160 XP_005413219;XP_013364610;XP_013364611;XP_013364612;XP_013364613;XP_013364614 MODEL 8994675 protein-coding Drc7 dynein regulatory complex subunit 7 INVOLVED IN flagellated sperm motility (ortholog); sperm axoneme assembly (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955433 15319829 15340525 + 102003577 AGCD01031751;GBDJ01278749;XM_005388404;XM_005388405 XP_005388461;XP_005388462 MODEL 8865295 ncrna LOC102024517 uncharacterized LOC102024517 NW_004955447 14334061 14335005 - 102024517 AGCD01041000;GBDF01124752;XR_262426 MODEL 8911053 ncrna LOC102003836 uncharacterized LOC102003836 NW_004955407 41449979 41453452 + 102003836 AGCD01007866;XR_259639 MODEL 9054982 pseudo LOC102009285 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955487 7895732 7897622 - 102009285 AGCD01059414 MODEL 9026956 pseudo LOC102017679 60S ribosomal protein L26 pseudogene NW_004955423 7248916 7249482 + 102017679 AGCD01023595 MODEL 8837515 ncrna LOC102012801 uncharacterized LOC102012801 NW_004955437 8031121 8040440 - 102012801 AGCD01034477;GBDF01226069;XR_261867 MODEL 8751704 ncrna LOC102009699 uncharacterized LOC102009699 NW_004955463 10028163 10058844 + 102009699 AGCD01049805;GBDF01179188;XR_263167;XR_263168 MODEL 8737316 protein-coding LOC102013918 interferon lambda-3 NW_004955468 290537 294752 - 102013918 AGCD01051687;AGCD01051688;XM_013522286 XP_013377740 MODEL 8850929 protein-coding Dicer1 dicer 1, ribonuclease III ENCODES a protein that exhibits double-stranded RNA binding (ortholog); miRNA binding (ortholog); pre-miRNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cardiac muscle cell development (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); childhood kidney cell carcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955438 17374899 17431599 + 102018859 AGCD01035441;GBCQ01012900;XM_013517206 XP_013372660 MODEL 10394534 ncrna LOC106149955 uncharacterized LOC106149955 NW_004955458 5199214 5213527 + 106149955 AGCD01047467;AGCD01047468;AGCD01047469;GBCE01149790;XR_001236448 MODEL 8787087 protein-coding LOC102010401 carboxylesterase 1D-like NW_004955433 13332713 13350578 - 102010401 AGCD01031684;AGCD01031685;XM_013516104 XP_013371558 MODEL 9045286 pseudo LOC102014297 ferritin light chain pseudogene NW_004955442 16402352 16402854 + 102014297 AGCD01037900 MODEL 8841585 pseudo LOC102016175 transcription elongation factor A protein-like 2 NW_004955503 8205063 8207037 - 102016175 AGCD01064812 MODEL 8814457 protein-coding Dand5 DAN domain BMP antagonist family member 5 ENCODES a protein that exhibits morphogen activity (ortholog); INVOLVED IN atrial septum development (ortholog); determination of heart left/right asymmetry (ortholog); determination of left/right asymmetry in lateral mesoderm (ortholog); ASSOCIATED WITH visceral heterotaxy (ortholog); visceral heterotaxy 13 (ortholog); visceral heterotaxy 5 (ortholog) NW_004955415 32012637 32015965 + 102014242 AGCD01016708;XM_005381142 XP_005381199 MODEL 9040250 ncrna LOC102008904 uncharacterized LOC102008904 NW_004955580 1286792 1287412 - 102008904 AGCD01075652;GBDK01422065;XR_265090 MODEL 8709213 ncrna LOC102008177 uncharacterized LOC102008177 NW_004955404 49258791 49264921 - 102008177 AGCD01004518;GBCQ01074933;XR_259344 MODEL 8903132 protein-coding LOC102021800 disintegrin and metalloproteinase domain-containing protein 18-like NW_004955536 3675217 3758163 + 102021800 AGCD01070831;AGCD01070832;AGCD01070833;AGCD01070834;GBDF01001976;XM_005410550;XM_013507715;XM_013507716 XP_005410607;XP_013363169;XP_013363170 MODEL 8866688 protein-coding Il5ra interleukin 5 receptor subunit alpha ENCODES a protein that exhibits interleukin-5 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-5 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955421 10211594 10259760 + 102021980 AGCD01021870;AGCD01021871;AGCD01021872;GBDF01113547;XM_005383750 XP_005383807 MODEL 39134362 misc_rna 7SK 7SK RNA 8775499 protein-coding Grb7 growth factor receptor bound protein 7 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); positive regulation of cell migration (ortholog); stress granule assembly (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH adenocarcinoma (ortholog); Breast Neoplasms (ortholog); esophageal carcinoma (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955451 14463032 14470392 + 102030589 AGCD01043555;GBCQ01005848;XM_013519238;XM_013519239;XM_013519240 XP_013374692;XP_013374693;XP_013374694 MODEL 8948078 protein-coding Kcnk2 potassium two pore domain channel subfamily K member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ligand-gated channel activity (ortholog); mechanosensitive potassium channel activity (ortholog); INVOLVED IN cardiac ventricle development (ortholog); cellular response to arachidonate (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH brain ischemia (ortholog); congestive heart failure (ortholog); depressive disorder (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte projection (ortholog); axon (ortholog) NW_004955406 2793493 2975322 - 102010768 AGCD01005662;AGCD01005663;AGCD01005664;GBDK01263945;XM_005374715;XM_005374716;XM_005374717 XP_005374772;XP_005374773;XP_005374774 MODEL 8969235 protein-coding Hspa13 heat shock protein family A (Hsp70) member 13 NW_004955407 16195366 16205371 - 102006742 AGCD01007209;GBBH01032849;XM_005375564 XP_005375621 MODEL 8922269 protein-coding Cimip2c ciliary microtubule inner protein 2C INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955469 8588820 8603333 + 102014346 AGCD01052476;GBDF01047461;XM_005400436 XP_005400493 MODEL 9045257 protein-coding LOC102013576 janus kinase and microtubule-interacting protein 2-like NW_004956233 10107 11664 - 102013576 AGCD01079290;XM_005415183 XP_005415240 MODEL 8742720 protein-coding Csrp3 cysteine and glycine rich protein 3 ENCODES a protein that exhibits actinin binding (ortholog); identical protein binding (ortholog); MRF binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cardiac muscle contraction (ortholog); cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955476 155913 176122 - 102003230 AGCD01055192;GBCB01038402;XM_005401712 XP_005401769 MODEL 8959292 pseudo LOC102009287 E3 SUMO-protein ligase PIAS2-like NW_004955421 24211084 24213430 - 102009287 AGCD01022209 MODEL 9048480 protein-coding LOC102005656 retinol dehydrogenase 7-like NW_004955641 46039 49565 - 102005656 AGCD01077703;AGCD01077704;XM_005415046 XP_005415103 MODEL 8944882 protein-coding Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN fatty acid homeostasis (ortholog); lipid digestion (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi apparatus (ortholog); microvillus (ortholog); plasma membrane (ortholog) NW_004955506 3151133 3154613 - 102025145 AGCD01065313;XM_005407509 XP_005407566 MODEL 8760239 protein-coding Ift43 intraflagellar transport 43 INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); connective tissue disease (ortholog); cranioectodermal dysplasia (ortholog); FOUND IN centriole (ortholog); cilium (ortholog); intercellular bridge (ortholog) NW_004955438 58503 144675 + 102027232 AGCD01034940;AGCD01034941;GBBH01062070;XM_005390147 XP_005390204 MODEL 8833180 pseudo LOC102016181 ferritin light chain-like NW_004955428 13569667 13577405 - 102016181 AGCD01027959 MODEL 8989621 protein-coding Ankrd39 ankyrin repeat domain 39 NW_004955470 4203363 4211560 - 102023576 AGCD01052728;GBCQ01042505;XM_005400684 XP_005400741 MODEL 8756777 ncrna LOC102008525 uncharacterized LOC102008525 NW_004955414 26180989 26187857 + 102008525 AGCD01015640;GBDF01208439;XR_260197 MODEL 10088482 pseudo LOC102020653 Ig kappa chain V-III region VG-like NW_004955470 685190 685883 - 102020653 AGCD01052618 MODEL 8998006 ncrna LOC102011177 uncharacterized LOC102011177 NW_004955408 10359375 10380970 - 102011177 AGCD01008267;AGCD01008268;GBDF01237961;XR_259677 MODEL 8906452 pseudo LOC102014684 RING finger protein 141 pseudogene NW_004955494 1838593 1840199 + 102014684 AGCD01061424 MODEL 8709496 protein-coding LOC102020311 proton-coupled amino acid transporter 1 NW_004955408 5895042 5933710 + 102020311 AGCD01008159;GBDK01305420;XM_005376161;XM_005376162 XP_005376218;XP_005376219 MODEL 8836488 protein-coding LOC102024519 vomeronasal type-1 receptor 1-like NW_004955584 372741 373664 - 102024519 AGCD01075940;XM_005414410 XP_005414467 MODEL 8904930 pseudo LOC102003840 matrin-3 pseudogene NW_004955408 32750191 32754243 - 102003840 AGCD01008854 MODEL 8842841 protein-coding Ddx41 DEAD-box helicase 41 ENCODES a protein that exhibits DNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cell population proliferation (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); aplastic anemia (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955408 29748091 29753610 - 102029480 AGCD01008770;GBCE01054904;XM_005376447 XP_005376504 MODEL 8830631 pseudo LOC102009701 heterogeneous nuclear ribonucleoprotein A1-like NW_004955411 2718176 2739446 - 102009701 AGCD01011515;AGCD01011516 MODEL 8701712 protein-coding LOC102012802 uncharacterized LOC102012802 NW_004955541 36527 43417 + 102012802 AGCD01071344;GBDI01026247;XM_005410957;XM_013507937;XM_013507938 XP_005411014;XP_013363391;XP_013363392 MODEL 39132047 rrna 5S_rRNA 5S ribosomal RNA 9030472 protein-coding Erlin2 ER lipid raft associated 2 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 10 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane raft (ortholog) NW_004955463 13445468 13460370 + 102011633 AGCD01049867;GBBH01031754;XM_005398411;XM_013521497;XM_013521498 XP_005398468;XP_013376951;XP_013376952 MODEL 8810544 pseudo LOC102015390 40S ribosomal protein S4-like NW_004955465 13917721 13921061 - 102015390 AGCD01050636 MODEL 8908636 protein-coding Cimip4 ciliary microtubule inner protein 4 FOUND IN sperm flagellum (ortholog) NW_004955413 23508531 23525964 - 102024988 AGCD01014332;GBDF01006505;XM_005379177;XM_005379178;XM_013511576;XM_013511577;XM_013511578;XM_013511579 XP_005379234;XP_005379235;XP_013367030;XP_013367031;XP_013367032;XP_013367033 MODEL 8925029 pseudo LOC102015799 E3 ubiquitin-protein ligase RNF13 pseudogene NW_004955403 46343655 46345148 - 102015799 AGCD01002856 MODEL 8836866 protein-coding Cst11 cystatin 11 INVOLVED IN defense response to Gram-negative bacterium (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) NW_004955415 30445556 30453439 - 102011655 AGCD01016664;GBDF01176636;XM_005381138 XP_005381195 MODEL 8766898 pseudo LOC102010402 small integral membrane protein 15-like NW_004955434 9168651 9169463 + 102010402 AGCD01032291 MODEL 9003709 protein-coding Acadvl acyl-CoA dehydrogenase very long chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); fatty-acyl-CoA binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; fatty acid beta degradation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiac Arrhythmias (ortholog); dilated cardiomyopathy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrial nucleoid (ortholog) NW_004955467 9684070 9689454 - 102003329 AGCD01051521;GBDI01062741;XM_013522095 XP_013377549 MODEL 8757531 protein-coding Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); eukaryotic translation initiation factor 2alpha kinase activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Chronic Hepatitis B (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 210867 279267 + 102016725 AGCD01024168;AGCD01024169;AGCD01024170;GBBH01143001;GBBH01143002;XM_013514710 XP_013370164 MODEL 8766282 protein-coding Il6 interleukin 6 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); histone H3K9ac reader activity (ortholog); INVOLVED IN autocrine signaling (ortholog); bone remodeling (ortholog); branching involved in salivary gland morphogenesis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH otitis media; Acute Coronary Syndrome (ortholog); Acute Hepatitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog); interleukin-6 receptor complex (ortholog) NW_004955410 25079835 25084390 + 102009154 AGCD01011140;GBDF01056731;XM_005377381 XP_005377438 MODEL 8718955 protein-coding Dao D-amino acid oxidase ENCODES a protein that exhibits D-amino-acid dehydrogenase activity (ortholog); D-amino-acid oxidase activity (ortholog); FAD binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); D-alanine catabolic process (ortholog); D-amino acid catabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955455 10095597 10127244 + 102028267 AGCD01045938;AGCD01045939;AGCD01045940;AGCD01045941;AGCD01045942;AGCD01045943;AGCD01045944;AGCD01045945;GBDF01299326;XM_005396478 XP_005396535 MODEL 8733095 protein-coding LOC102016560 uncharacterized LOC102016560 NW_004955454 508411 513395 + 102016560 AGCD01044959;GBDF01010964;XM_005395726;XM_013520085 XP_005395783;XP_013375539 MODEL 8900040 pseudo LOC102012019 RNA-binding motif protein, X chromosome-like NW_004955436 8932484 8933843 - 102012019 AGCD01033755;XR_261778 MODEL 8717299 protein-coding LOC102013922 uncharacterized LOC102013922 NW_004955470 5868613 5875570 + 102013922 AGCD01052761;GBDF01111358;XM_005400752;XM_005400753;XR_263472 XP_005400809;XP_005400810 MODEL 8839513 ncrna LOC102013200 uncharacterized LOC102013200 NW_004955431 18996533 19001698 + 102013200 AGCD01030438;GBDF01083957;XR_001234628;XR_261489 MODEL 39133795 misc_rna 7SK 7SK RNA 8746502 protein-coding Dido1 death inducer-obliterator 1 INVOLVED IN apoptotic signaling pathway (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); myelodysplastic/myeloproliferative neoplasm (ortholog); neuronal ceroid lipofuscinosis (ortholog); FOUND IN nucleus (ortholog) NW_004955528 1153181 1207346 + 102021701 AGCD01069552;AGCD01069553;GBDF01176165;XM_005410006;XM_005410007;XM_005410008;XM_005410010;XM_005410011;XM_013507449;XM_013507450 XP_005410063;XP_005410064;XP_005410065;XP_005410067;XP_005410068;XP_013362903;XP_013362904 MODEL 8775179 ncrna LOC102013584 uncharacterized LOC102013584 NW_004955456 7084779 7090828 + 102013584 AGCD01046384;GBDF01281673;XR_001236335 MODEL 10230964 protein-coding CUNH19orf84 chromosome unknown C19orf84 homolog ASSOCIATED WITH COVID-19 (ortholog) NW_004955558 1016920 1019617 + 106147432 AGCD01073411;GBDF01280520;XM_013508903 XP_013364357 MODEL 8810551 protein-coding Jak3 Janus kinase 3 ENCODES a protein that exhibits protein phosphatase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN altered Jak-Stat signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute megakaryocytic leukemia (ortholog); adenosine deaminase deficiency (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955524 3399895 3412018 + 102015758 AGCD01068894;AGCD01068895;GBDK01109947;XM_005409547 XP_005409604 MODEL 9064792 protein-coding LOC102019294 melanoma-associated antigen 10-like NW_004955498 2586214 2586879 - 102019294 AGCD01062811;XM_005406471 XP_005406528 MODEL 8858068 protein-coding Il6r interleukin 6 receptor ENCODES a protein that exhibits ciliary neurotrophic factor binding (ortholog); ciliary neurotrophic factor receptor activity (ortholog); cytokine receptor activity (ortholog); INVOLVED IN autocrine signaling (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); ciliary neurotrophic factor receptor complex (ortholog) NW_004955545 932814 979359 + 102022428 AGCD01071826;AGCD01071827;AGCD01071828;AGCD01071829;AGCD01071830;GBBH01050791;XM_013508348;XM_013508349 XP_013363802;XP_013363803 MODEL 9029011 ncrna LOC102021044 uncharacterized LOC102021044 NW_004955538 202245 253351 + 102021044 AGCD01070993;GBCB01132110;XR_001232103;XR_001232104;XR_001232105;XR_001232106;XR_001232107;XR_001232108;XR_001232109;XR_264790;XR_264791 MODEL 8996470 protein-coding Cpsf7 cleavage and polyadenylation specific factor 7 INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA alternative polyadenylation (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog) NW_004955511 6139118 6161130 + 102013321 AGCD01066597;AGCD01066598;GBBH01141872;XM_005408149;XM_005408150 XP_005408206;XP_005408207 MODEL 8990784 pseudo LOC102008909 lupus La protein homolog pseudogene NW_004955402 62999061 63000015 - 102008909 AGCD01001651 MODEL 39134363 misc_rna 7SK 7SK RNA 8946968 protein-coding Ensa endosulfine alpha ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN regulation of insulin secretion (ortholog); response to glucose (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); Spinal Cord Injuries (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 197239 204867 + 102010046 AGCD01013444;GBDK01006530;XM_005378669;XM_005378670;XM_013511414;XM_013511415 XP_005378726;XP_005378727;XP_013366868;XP_013366869 MODEL 8982443 ncrna LOC102011610 uncharacterized LOC102011610 NW_004955451 5820260 5823021 - 102011610 AGCD01043179;GBDJ01389060;XR_001236001;XR_001236002 MODEL 8882765 protein-coding Drd1 dopamine receptor D1 ENCODES a protein that exhibits angiotensin receptor binding (ortholog); arrestin family protein binding (ortholog); ATPase binding (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH Albuminuria (ortholog); alcohol dependence (ortholog); Alzheimer's disease (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955408 28003229 28006595 - 102006214 AGCD01008697;XM_005376361 XP_005376418 MODEL 8970283 protein-coding LOC102016182 uncharacterized LOC102016182 NW_004955429 14278917 14285980 - 102016182 AGCD01028778;XM_005387011;XM_013515397 XP_005387068;XP_013370851 MODEL 8846598 protein-coding LOC102017681 microtubule-associated tumor suppressor candidate 2-like NW_004955497 8132720 8368038 + 102017681 AGCD01062697;AGCD01062698;AGCD01062699;AGCD01062700;AGCD01062701;AGCD01062702;AGCD01062703;AGCD01062704;GBDF01251346;XM_005406382 XP_005406439 MODEL 9014308 protein-coding Kcnk3 potassium two pore domain channel subfamily K member 3 ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); open rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to hypoxia (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Deafness (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955469 8710749 8744423 + 102014884 AGCD01052479;AGCD01052480;AGCD01052481;GBDF01145201;GBDI01357949;XM_005400437 XP_005400494 MODEL 8805284 protein-coding LOC102020670 histone H3 NW_004955483 979276 984732 + 102020670 AGCD01057638;XM_005403308;XM_013503789 XP_005403365;XP_013359243 MODEL 8765260 protein-coding Hspa14 heat shock protein family A (Hsp70) member 14 ASSOCIATED WITH mouth disease (ortholog); FOUND IN cytosol (ortholog); ribosome (ortholog) NW_004955429 19533586 19577834 - 102024939 AGCD01028964;AGCD01028965;GBCB01073264;GBDF01125228;XM_013515372 XP_013370826 MODEL 8824359 pseudo LOC102024520 protein DBF4 homolog A-like NW_004955612 137320 137941 + 102024520 AGCD01077180 MODEL 9048624 protein-coding LOC102014298 kallikrein-4-like NW_004955559 103715 127768 + 102014298 AGCD01073544;AGCD01073545;AGCD01073546;XM_005412964 XP_005413021 MODEL 8992459 ncrna LOC102012023 uncharacterized LOC102012023 NW_004955437 2178719 2183875 + 102012023 AGCD01034261;AGCD01034262;GBDF01160448;XR_001235086;XR_001235087;XR_001235088 MODEL 8811467 protein-coding Ddx42 DEAD-box helicase 42 ENCODES a protein that exhibits RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); regulation of apoptotic process (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Cachexia (ortholog); myelodysplastic syndrome (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955478 8009155 8052990 - 102021339 AGCD01056005;GBCE01076587;XM_005402189;XM_005402190 XP_005402246;XP_005402247 MODEL 8720420 ncrna LOC102008179 uncharacterized LOC102008179 NW_004955405 32467481 32489401 + 102008179 AGCD01005333;GBDF01013620;XR_001235728 MODEL 39134057 misc_rna 7SK 7SK RNA 9026531 pseudo LOC102015393 olfactory receptor 1468-like NW_004955467 13352514 13353443 - 102015393 AGCD01051671 MODEL 8788936 protein-coding CUNH1orf105 chromosome unknown C1orf105 homolog NW_004955406 12883547 12919467 + 102029359 AGCD01005928;GBDF01049966;XM_005374859 XP_005374916 MODEL 8833270 protein-coding LOC102021806 kallikrein-13 NW_004955558 1399746 1434873 + 102021806 AGCD01073442;AGCD01073443;AGCD01073444;GBCQ01148135;XM_005412713;XM_005412715;XM_013508921;XM_013508922;XM_013508923 XP_005412770;XP_005412772;XP_013364375;XP_013364376;XP_013364377 MODEL 39131851 rrna 5S_rRNA 5S ribosomal RNA 8828891 protein-coding Acan aggrecan ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix structural constituent (ortholog); INVOLVED IN cartilage condensation (ortholog); cellular response to growth factor stimulus (ortholog); chondroblast differentiation (ortholog); ASSOCIATED WITH achondroplasia (ortholog); Brain Injuries (ortholog); congestive heart failure (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955416 16125536 16186046 - 102015842 AGCD01017350;AGCD01017351;GBCE01089460;XM_005381703 XP_005381760 MODEL 8870492 protein-coding Fcf1 FCF1 rRNA-processing protein INVOLVED IN endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN small-subunit processome (ortholog) NW_004955523 801117 818521 - 102017807 AGCD01068480;AGCD01068481;GBCQ01095904;XM_005409391 XP_005409448 MODEL 8942984 ncrna LOC102011178 uncharacterized LOC102011178 NW_004955457 13088413 13091964 + 102011178 AGCD01047037;GBBH01088650;XR_262949 MODEL 10195714 ncrna LOC106149956 uncharacterized LOC106149956 NW_004955458 12865762 12870002 + 106149956 AGCD01047791;GBDF01252519;XR_001236451 MODEL 8748413 ncrna LOC102021045 uncharacterized LOC102021045 NW_004955542 1395369 1398553 - 102021045 AGCD01071503;GBDF01251072;XR_264852 MODEL 8809845 protein-coding Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ENCODES a protein that exhibits eukaryotic translation initiation factor 2alpha kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to cold (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH amino acid metabolic disorder (ortholog); genetic disease (ortholog); hair disease (ortholog); FOUND IN cytoplasm (ortholog) NW_004955416 6897897 7005602 + 102013603 AGCD01016957;AGCD01016958;AGCD01016959;AGCD01016960;AGCD01016961;GBBH01172188;XM_005381212 XP_005381269 MODEL 8845878 ncrna LOC102020312 uncharacterized LOC102020312 NW_004955461 9328613 9331182 - 102020312 AGCD01048944;GBDF01159879;XR_263084 MODEL 8778321 pseudo LOC102011611 spliceosome-associated protein CWC15 homolog pseudogene NW_004955403 25832090 25832764 + 102011611 AGCD01002295 MODEL 8862196 protein-coding LOC102008527 olfactory receptor 52N4-like NW_004955414 21703835 21704818 + 102008527 AGCD01015429;XM_013511734 XP_013367188 MODEL 8801185 ncrna LOC102009289 uncharacterized LOC102009289 NW_004955422 20690361 20700604 - 102009289 AGCD01023085;AGCD01023086;GBCB01050340;XR_260904 MODEL 8970252 ncrna LOC102012807 uncharacterized LOC102012807 NW_004955442 3947192 3955740 - 102012807 AGCD01037517;GBBH01153642;XR_262112 MODEL 8716337 pseudo LOC102017682 deoxynucleotidyltransferase terminal-interacting protein 2 pseudogene NW_004955498 2146251 2152131 + 102017682 AGCD01062766;AGCD01062767 MODEL 8709960 protein-coding Erln endoregulin INVOLVED IN negative regulation of ATPase-coupled calcium transmembrane transporter activity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955506 6590028 6592474 - 102014927 AGCD01065432;GBDF01040884;XM_005407489 XP_005407546 MODEL 8830201 protein-coding LOC102024522 glutamate-rich protein 1-like NW_004956601 108 3596 + 102024522 AGCD01079869;AGCD01079870;GBCE01024165;GBDK01393692;XM_005415206 XP_005415263 MODEL 9054330 pseudo LOC102013585 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like NW_004955456 11429523 11430045 + 102013585 AGCD01046551 MODEL 8769677 protein-coding Ift46 intraflagellar transport 46 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955412 19697995 19710965 - 102012175 AGCD01012969;AGCD01012970;AGCD01012971;GBDF01049816;XM_005378250 XP_005378307 MODEL 8999710 ncrna LOC102019297 uncharacterized LOC102019297 NW_004955427 11260026 11277529 - 102019297 AGCD01027179;AGCD01027180;AGCD01027181;GBBH01138238;XR_001234355;XR_261252 MODEL 8852633 ncrna LOC102010405 uncharacterized LOC102010405 NW_004955436 1481983 1512078 + 102010405 AGCD01033577;AGCD01033578;AGCD01033579;GBDF01153927;XR_001234957;XR_001234958;XR_001234959;XR_001234960;XR_001234961;XR_001234962;XR_001234963;XR_001234964 MODEL 8921979 protein-coding Btf3l4 basic transcription factor 3 like 4 NW_004955464 7044634 7069593 - 102022796 AGCD01050053;GBCE01116828;XM_005398593;XM_005398594;XM_005398595 XP_005398650;XP_005398651;XP_005398652 MODEL 8970688 protein-coding Greb1 growth regulating estrogen receptor binding 1 ASSOCIATED WITH endometriosis (ortholog); Prostatic Neoplasms (ortholog) NW_004955487 6032774 6112715 + 102006583 AGCD01059353;AGCD01059354;AGCD01059355;GBDF01111413;XM_005404427;XM_013504384;XM_013504385;XM_013504386;XM_013504387;XM_013504388;XM_013504389;XM_013504390;XM_013504391;XM_013504392;XM_013504393;XM_013504394 XP_005404484;XP_013359838;XP_013359839;XP_013359840;XP_013359841;XP_013359842;XP_013359843;XP_013359844;XP_013359845;XP_013359846;XP_013359847;XP_013359848 MODEL 8830742 pseudo LOC102016561 alpha- and gamma-adaptin-binding protein p34 pseudogene NW_004955455 9962053 9963132 + 102016561 AGCD01045933 MODEL 8950071 protein-coding Il6st interleukin 6 cytokine family signal transducer ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); ciliary neurotrophic factor receptor binding (ortholog); coreceptor activity (ortholog); INVOLVED IN autocrine signaling (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); Alzheimer's disease (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cell body (ortholog); ciliary neurotrophic factor receptor complex (ortholog); dendrite (ortholog) NW_004955446 11790636 11837734 + 102013983 AGCD01040212;AGCD01040213;GBDF01189975;GBDK01071858;XM_005392688 XP_005392745 MODEL 8844665 protein-coding Dap death associated protein INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH ulcerative colitis (ortholog) NW_004955426 398593 452004 - 102005396 AGCD01026001;AGCD01026002;GBCQ01002216;XM_005386121 XP_005386178 MODEL 8756270 ncrna LOC102013201 uncharacterized LOC102013201 NW_004955514 2802131 2803038 - 102013201 AGCD01067089;GBDF01249222;XR_264503 MODEL 9046474 pseudo LOC102003842 protein CASC4 pseudogene NW_004955459 21261 22548 - 102003842 AGCD01047923 MODEL 39133796 misc_rna 7SK 7SK RNA 8951489 pseudo LOC102013930 uncharacterized LOC102013930 NW_004955415 31555747 31559936 + 102013930 AGCD01016683 MODEL 8995606 protein-coding LOC102007781 cytochrome b-c1 complex subunit 2, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 5 (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955493 655619 689705 + 102007781 AGCD01060859;GBDF01004785;XM_005405054 XP_005405111 MODEL 9011050 pseudo LOC102011180 multifunctional protein ADE2-like NW_004955458 11807530 11818009 - 102011180 AGCD01047760 MODEL 8873049 protein-coding Cimip5 ciliary microtubule inner protein 5 FOUND IN cilium (ortholog) NW_004955487 5843411 5847738 + 102019507 AGCD01059348;XM_005404457 XP_005404514 MODEL 8803581 protein-coding LOC102011614 translation initiation factor IF-2-like NW_004955451 13182675 13184330 - 102011614 AGCD01043458;GBDK01206490;XM_005394257;XR_001235982 XP_005394314 MODEL 8861401 protein-coding Cst3 cystatin C ENCODES a protein that exhibits amyloid-beta binding (ortholog); cysteine-type endopeptidase inhibitor activity (ortholog); endopeptidase inhibitor activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to oxidative stress (ortholog); defense response (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); age related macular degeneration 11 (ortholog); FOUND IN axon (ortholog); basement membrane (ortholog); cell projection (ortholog) NW_004955415 30507972 30512109 - 102006906 AGCD01016664;GBDF01008320;XM_005380975 XP_005381032 MODEL 8863316 ncrna LOC102015805 uncharacterized LOC102015805 NW_004955406 28240519 28241931 + 102015805 AGCD01006295;XR_259506 MODEL 8915836 protein-coding Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor ENCODES a protein that exhibits 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity (ortholog); rRNA (adenine-N6,N6-)-dimethyltransferase activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); ribosomal small subunit biogenesis (ortholog); rRNA methylation (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) NW_004955446 6235004 6244422 + 102025522 AGCD01040090;GBDF01225076;XM_005392642;XM_013518423 XP_005392699;XP_013373877 MODEL 8887164 pseudo LOC102014299 transformer-2 protein homolog beta pseudogene NW_004955444 14166177 14166938 + 102014299 AGCD01039116 MODEL 9021213 protein-coding Ankrd40 ankyrin repeat domain 40 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 11078839 11085303 + 102010763 AGCD01043342;GBDI01172269;GBDK01132584;XM_013519433;XM_013519434 XP_013374887;XP_013374888 MODEL 8800184 protein-coding Hspa2 heat shock protein family A (Hsp70) member 2 ENCODES a protein that exhibits enzyme binding (ortholog); glycolipid binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN male meiosis I (ortholog); male meiotic nuclear division (ortholog); negative regulation of inclusion body assembly (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Myocardial Ischemia (ortholog); FOUND IN CatSper complex (ortholog); cell surface (ortholog); cytosol (ortholog) NW_004955466 5344366 5347707 - 102027280 AGCD01050876;GBDF01007443;XM_005399120 XP_005399177 MODEL 39134364 misc_rna 7SK 7SK RNA 9039109 protein-coding LOC102014685 chromosome unknown open reading frame, human C19orf38 NW_004955495 1945560 1956990 + 102014685 AGCD01061740;AGCD01061741;AGCD01061742;GBDI01077237;XM_005405635 XP_005405692 MODEL 10178222 protein-coding CUNH1orf115 chromosome unknown C1orf115 homolog INVOLVED IN regulation of response to drug (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog) NW_004955520 3064235 3065978 - 106147121 AGCD01068093;GBCQ01007383;XM_013507062 XP_013362516 MODEL 8936648 pseudo LOC102024525 60 kDa heat shock protein, mitochondrial-like NW_004955452 17463482 17488548 + 102024525 AGCD01044555;AGCD01044556 MODEL 9058724 protein-coding Ermap erythroblast membrane associated protein (Scianna blood group) FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955537 2340282 2360925 + 102016848 AGCD01070925;AGCD01070926;AGCD01070927;GBBH01072402;XM_013507744;XM_013507745 XP_013363198;XP_013363199 MODEL 8721541 protein-coding Cpt1a carnitine palmitoyltransferase 1A ENCODES a protein that exhibits carnitine O-palmitoyltransferase activity (ortholog); identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to fatty acid (ortholog); eating behavior (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); atherosclerosis (ortholog); Breast Neoplasms (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955422 17105887 17159696 + 102029191 AGCD01022912;AGCD01022913;GBDF01249181;XM_005384264;XM_005384265 XP_005384321;XP_005384322 MODEL 8948967 protein-coding Ddx43 DEAD-box helicase 43 NW_004955493 8541937 8578199 + 102022093 AGCD01061309;AGCD01061310;AGCD01061311;AGCD01061312;AGCD01061313;AGCD01061314;GBCE01162665;GBDF01081346;XM_013504889;XM_013504890 XP_013360343;XP_013360344 MODEL 9007383 protein-coding LOC102021810 olfactory receptor 1052-like NW_004955568 988414 994736 - 102021810 AGCD01074533;AGCD01074534;XM_005413486 XP_005413543 MODEL 39132048 rrna 5S_rRNA 5S ribosomal RNA 8758883 protein-coding Drd2 dopamine receptor D2 ENCODES a protein that exhibits dopamine binding (ortholog); dopamine neurotransmitter receptor activity (ortholog); dopamine neurotransmitter receptor activity, coupled via Gi/Go (ortholog); INVOLVED IN acid secretion (ortholog); activation of protein kinase activity (ortholog); adenohypophysis development (ortholog); PARTICIPATES IN dopamine signaling pathway; dopamine signaling pathway via D2 family of receptors; excitatory synaptic transmission pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alcohol Withdrawal Seizures (ortholog); alcohol-induced mental disorder (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); acrosomal vesicle (ortholog); axon (ortholog) NW_004955412 15054255 15114558 - 102009029 AGCD01012865;GBDF01013546;XM_005378146;XM_013510952 XP_005378203;XP_013366406 MODEL 8747188 protein-coding LOC102021049 beta-microseminoprotein-like NW_004955546 2858387 2870863 - 102021049 AGCD01072102;AGCD01072103;GBBH01135368;XM_005411812;XM_005411813 XP_005411869;XP_005411870 MODEL 8815866 protein-coding LOC102016183 annexin A8 NW_004955510 6272225 6286726 - 102016183 AGCD01066304;GBCE01001287;XM_005407920 XP_005407977 MODEL 8799317 ncrna LOC102020314 uncharacterized LOC102020314 NW_004955463 5307223 5319278 + 102020314 AGCD01049638;GBDF01149770;XR_263152 MODEL 8998256 ncrna LOC102020677 uncharacterized LOC102020677 NW_004955421 9556664 9717614 + 102020677 AGCD01021851;AGCD01021852;AGCD01021853;AGCD01021854;AGCD01021855;AGCD01021856;AGCD01021857;GBDF01187921;XR_260791 MODEL 8919708 protein-coding LOC102012027 uncharacterized LOC102012027 NW_004955438 16193937 16196191 - 102012027 AGCD01035397;GBDI01015943;XM_013517279 XP_013372733 MODEL 8769765 pseudo LOC102013205 DCN1-like protein 1 pseudogene NW_004955523 1164391 1165382 - 102013205 AGCD01068503 MODEL 8991803 protein-coding Jakmip1 janus kinase and microtubule interacting protein 1 ENCODES a protein that exhibits GABA receptor binding (ortholog); kinesin binding (ortholog); RNA binding (ortholog); INVOLVED IN cognition (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); intellectual disability (ortholog); FOUND IN membrane (ortholog); microtubule cytoskeleton (ortholog); ribonucleoprotein complex (ortholog) NW_004955514 3987231 4088762 + 102020598 AGCD01067123;AGCD01067124;AGCD01067125;AGCD01067126;AGCD01067127;XM_013506849;XM_013506850;XM_013506851 XP_013362303;XP_013362304;XP_013362305 MODEL 8968151 protein-coding LOC102009291 uncharacterized LOC102009291 NW_004955495 1844763 1851588 - 102009291 AGCD01061735;GBBH01140669;XM_005405612;XM_005405613;XM_005405614;XM_013505148 XP_005405669;XP_005405670;XP_005405671;XP_013360602 MODEL 39134058 misc_rna 7SK 7SK RNA 8779976 ncrna LOC102012811 uncharacterized LOC102012811 NW_004955559 2195047 2205058 - 102012811 AGCD01073700;AGCD01073701;GBBH01056100;XR_265004 MODEL 9018140 protein-coding LOC102016184 vomeronasal type-1 receptor 90-like NW_004955429 12240723 12241640 - 102016184 AGCD01028708;XM_005387242 XP_005387299 MODEL 8857547 pseudo LOC102008915 R-spondin-3 pseudogene NW_004955406 6122483 6124674 - 102008915 AGCD01005744 MODEL 8871366 ncrna LOC102013588 uncharacterized LOC102013588 NW_004955460 8620087 8620963 - 102013588 AGCD01048528;GBBH01206621;XR_001236520 MODEL 8874515 pseudo LOC102010411 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955545 1844626 1846296 - 102010411 AGCD01071873 MODEL 8877912 pseudo LOC102009712 olfactory receptor 2S2-like NW_004955472 459622 466367 + 102009712 AGCD01053339 MODEL 8848056 protein-coding Enthd1 ENTH domain containing 1 NW_004955413 25580200 25684390 - 102006446 AGCD01014409;AGCD01014410;AGCD01014411;AGCD01014412;GBCB01019792;XM_005379305;XM_013511604 XP_005379362;XP_013367058 MODEL 10070073 protein-coding LOC106149957 uncharacterized LOC106149957 NW_004955458 15204473 15214967 - 106149957 AGCD01047874;AGCD01047875;AGCD01047876;GBBH01193369;GBDK01117171;XM_013520901 XP_013376355 MODEL 8769283 protein-coding Btg1 BTG anti-proliferation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); multiple myeloma (ortholog); protein-energy malnutrition (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955405 29206889 29209407 - 102021082 AGCD01005248;GBCB01021122;XM_005374452 XP_005374509 MODEL 8729671 protein-coding Eif2b1 eukaryotic translation initiation factor 2B subunit alpha ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); negative regulation of guanyl-nucleotide exchange factor activity (ortholog); oligodendrocyte development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955482 5380121 5388588 + 102015199 AGCD01057326;GBDF01160540;XM_005403026;XM_013503549 XP_005403083;XP_013359003 MODEL 8799998 protein-coding Acap1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 NW_004955467 9568455 9583279 - 102018582 AGCD01051518;AGCD01051519;GBDI01062258;XM_005399511;XM_013522119;XR_001236859 XP_005399568;XP_013377573 MODEL 8768400 protein-coding Kcnk4 potassium two pore domain channel subfamily K member 4 ENCODES a protein that exhibits identical protein binding (ortholog); mechanosensitive potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to alkaline pH (ortholog); cellular response to arachidonate (ortholog); ASSOCIATED WITH Facial Dysmorphism, Hypertrichosis, Epilepsy, Intellectual/Developmental Delay, and Gingival Overgrowth Syndrome (ortholog); FOUND IN node of Ranvier (ortholog); plasma membrane (ortholog); potassium channel complex (ortholog) NW_004955422 20780765 20788988 - 102012867 AGCD01023087;GBDI01041896;XM_013514228;XM_013514229;XM_013514230;XM_013514231;XM_013514232;XM_013514233 XP_013369682;XP_013369683;XP_013369684;XP_013369685;XP_013369686;XP_013369687 MODEL 8818566 pseudo LOC102008528 density-regulated protein pseudogene NW_004955415 15527746 15528569 + 102008528 AGCD01016348 MODEL 8777040 pseudo LOC102011616 transcription termination factor 2 pseudogene NW_004955403 54518608 54521373 - 102011616 AGCD01003099 MODEL 8885480 protein-coding LOC102008182 glutathione S-transferase theta-1-like NW_004955455 8317663 8323287 - 102008182 AGCD01045886;GBBH01177305;XM_005396408 XP_005396465 MODEL 8765746 protein-coding LOC102013933 schlafen family member 12-like NW_004955481 9985188 10014736 + 102013933 AGCD01057130;AGCD01057131;AGCD01057132;GBBH01068824;XM_013503415;XM_013503416 XP_013358869;XP_013358870 MODEL 39131852 rrna 5S_rRNA 5S ribosomal RNA 9037512 ncrna LOC102007790 uncharacterized LOC102007790 NW_004955426 20154984 20166755 + 102007790 AGCD01026563;AGCD01026564;GBDF01299083;XR_261208 MODEL 9004087 pseudo LOC102019299 ferritin heavy chain pseudogene NW_004955506 5978894 5981769 + 102019299 AGCD01065396 MODEL 39134059 misc_rna 7SK 7SK RNA 8982645 protein-coding Fcgbp Fc gamma binding protein ASSOCIATED WITH genetic disease (ortholog); Stomach Neoplasms (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955578 1131446 1169440 + 102021925 AGCD01075510;GBDK01133506;XM_005414081;XM_005414082 XP_005414138;XP_005414139 MODEL 8721089 ncrna LOC102010412 uncharacterized LOC102010412 NW_004955545 2843891 2852564 - 102010412 AGCD01071925;GBDI01188014;XR_264882 MODEL 8926846 protein-coding LOC102016565 uncharacterized LOC102016565 NW_004955408 5607325 5608412 - 102016565 AGCD01008145;XM_005376151 XP_005376208 MODEL 8701549 pseudo LOC102003845 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955462 10272846 10275300 + 102003845 AGCD01049360 MODEL 39132050 rrna 5S_rRNA 5S ribosomal RNA 8831349 protein-coding Dap3 death associated protein 3 ENCODES a protein that exhibits GTPase activity (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); mitochondrial translation (ortholog); PARTICIPATES IN Trail mediated signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Perrault Syndrome 1 (ortholog); Perrault syndrome 7 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955545 1951008 1981174 + 102010094 AGCD01071876;GBBH01005546;XM_005411615 XP_005411672 MODEL 8813481 ncrna LOC102011190 uncharacterized LOC102011190 NW_004955413 27903491 27912153 + 102011190 AGCD01014537;GBDI01285497;XR_260120 MODEL 8799199 protein-coding LOC102015403 olfactory receptor 226-like NW_004955477 11120415 11121371 - 102015403 AGCD01055716;XM_005402086 XP_005402143 MODEL 8707425 protein-coding LOC102021052 olfactory receptor 4K5-like NW_004955550 475406 483319 - 102021052 AGCD01072506;AGCD01072507;XM_013508546 XP_013364000 MODEL 8768214 protein-coding Cimip6 ciliary microtubule inner protein 6 NW_004955441 19944178 20041318 + 102004646 AGCD01037385;AGCD01037386;AGCD01037387;AGCD01037388;AGCD01037389;AGCD01037390;AGCD01037391;AGCD01037392;GBCQ01063051;XM_005391030 XP_005391087 MODEL 8788368 protein-coding Dio1 iodothyronine deiodinase 1 ENCODES a protein that exhibits selenium binding (ortholog); thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); thyroid hormone catabolic process (ortholog); thyroid hormone metabolic process (ortholog); ASSOCIATED WITH Abnormal Thyroid Hormone Metabolism 2 (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955464 5340219 5355182 - 102007314 AGCD01050004;GBDI01002388;XM_013521716 XP_013377170 MODEL 8946513 protein-coding LOC102015807 40S ribosomal protein S2-like NW_004955407 42481379 42485367 + 102015807 AGCD01007892;GBDF01023024;XM_005375924 XP_005375981 MODEL 9026283 protein-coding Ift52 intraflagellar transport 52 INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); gastrointestinal stromal tumor (ortholog); Short-Rib Thoracic Dysplasia 16 with or without Polydactyly (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955445 13542726 13580204 - 102025631 AGCD01039791;AGCD01039792;AGCD01039793;AGCD01039794;GBCE01054533;XM_005392497 XP_005392554 MODEL 39134365 misc_rna 7SK 7SK RNA 9053902 protein-coding Jakmip2 janus kinase and microtubule interacting protein 2 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); melanoma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955415 6431045 6593485 + 102027636 AGCD01016016;AGCD01016017;AGCD01016018;AGCD01016019;AGCD01016020;AGCD01016021;AGCD01016022;GBDF01185873;XM_005381120 XP_005381177 MODEL 9049269 ncrna LOC102014688 uncharacterized LOC102014688 NW_004955424 8803391 8810952 - 102014688 AGCD01024480;AGCD01024481;GBDF01180568;XR_261048 MODEL 9031057 protein-coding Hspa4 heat shock protein family A (Hsp70) member 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); kidney development (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Brain Injuries (ortholog); Chagas disease (ortholog); FOUND IN cytosol (ortholog); extracellular exosome (ortholog); lipid droplet (ortholog) NW_004955408 4379825 4422710 + 102008290 AGCD01008110;AGCD01008111;AGCD01008112;GBDF01051107;XM_005376122 XP_005376179 MODEL 8860731 protein-coding LOC102008917 keratin-associated protein 20-2-like NW_004955407 30198704 30198859 + 102008917 AGCD01007628;XM_005375646 XP_005375703 MODEL 8713511 protein-coding Greb1l GREB1 like retinoic acid receptor coactivator INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cardiac muscle cell differentiation (ortholog); cardiac ventricle development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 80 (ortholog); branchiootic syndrome (ortholog); CAKUT (ortholog) NW_004955402 9865934 10204990 + 102018548 AGCD01000233;AGCD01000234;AGCD01000235;AGCD01000236;AGCD01000237;AGCD01000238;AGCD01000239;AGCD01000240;AGCD01000241;AGCD01000242;AGCD01000243;AGCD01000244;AGCD01000245;AGCD01000246;AGCD01000247;AGCD01000248;AGCD01000249;AGCD01000250;AGCD01000251;AGCD01000252;GBDF01250435;XM_013503842 XP_013359296 MODEL 9006572 ncrna LOC102021816 uncharacterized LOC102021816 NW_004955447 11714605 11734638 + 102021816 AGCD01040914;AGCD01040915;AGCD01040916;GBDF01081165;XR_262420 MODEL 8884037 protein-coding Ermard ER membrane associated RNA degradation ASSOCIATED WITH periventricular nodular heterotopia (ortholog); Periventricular Nodular Heterotopia 6 (ortholog) NW_004955411 3838125 3866282 - 102018814 AGCD01011556;GBDK01058947;XM_005377629;XM_005377630;XM_005377631;XM_005377632;XM_005377633;XM_005377634;XM_013510740;XM_013510742 XP_005377686;XP_005377687;XP_005377688;XP_005377689;XP_005377690;XP_005377691;XP_013366194;XP_013366196 MODEL 8895369 pseudo LOC102009713 tubulin alpha-1 chain-like NW_004955415 27942717 27943523 - 102009713 AGCD01016636 MODEL 39133797 misc_rna 7SK 7SK RNA 9062004 protein-coding Ddx46 DEAD-box helicase 46 INVOLVED IN mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nuclear speck (ortholog); U2-type spliceosomal complex (ortholog) NW_004955408 29981509 30031473 + 102006001 AGCD01008791;AGCD01008792;GBDF01118769;XM_005376463;XM_005376464;XM_005376465 XP_005376520;XP_005376521;XP_005376522 MODEL 8734471 pseudo LOC102020315 elongation factor 1-beta pseudogene NW_004955410 18673488 18701633 - 102020315 AGCD01011009;AGCD01011010 MODEL 8881808 ncrna LOC102005660 uncharacterized LOC102005660 NW_004955404 45053525 45082173 - 102005660 AGCD01004437;XR_001234995;XR_259339 MODEL 8795866 pseudo LOC102020678 transketolase-like protein 1 pseudogene NW_004955489 587089 589357 + 102020678 AGCD01059810 MODEL 8836421 protein-coding Cst6 cystatin E/M INVOLVED IN epidermis development (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 4B (ortholog); Breast Neoplasms (ortholog); ectodermal dysplasia 15 (ortholog); FOUND IN cornified envelope (ortholog) NW_004955422 19326302 19327449 - 102021456 AGCD01023000;GBCE01001766;GBCQ01008481;XM_005384435 XP_005384492 MODEL 8721160 protein-coding LOC102013213 uncharacterized LOC102013213 NW_004955538 373207 647107 + 102013213 AGCD01070995;AGCD01070996;AGCD01070997;AGCD01070998;AGCD01070999;AGCD01071000;AGCD01071001;AGCD01071002;AGCD01071003;AGCD01071004;AGCD01071005;AGCD01071006;AGCD01071007;AGCD01071008;AGCD01071009;AGCD01071010;AGCD01071011;AGCD01071012;AGCD01071013;AGCD01071014;AGCD01071015;AGCD01071016;AGCD01071017;AGCD01071018;AGCD01071019;AGCD01071020;AGCD01071021;AGCD01071022;AGCD01071023;AGCD01071024;AGCD01071025;AGCD01071026;AGCD01071027;AGCD01071028;AGCD01071029;AGCD01071030;AGCD01071031;AGCD01071032;GBDF01017551;XM_005410885 XP_005410942 MODEL 8999214 protein-coding Ankrd42 ankyrin repeat domain 42 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN obsolete positive regulation of DNA-binding transcription factor activity (ortholog); obsolete positive regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); FOUND IN nucleus (ortholog) NW_004955414 9351512 9395937 - 102026206 AGCD01015019;AGCD01015020;AGCD01015021;GBDF01086583;XM_005379798;XM_005379800;XM_013511792;XM_013511793;XM_013511794 XP_005379855;XP_005379857;XP_013367246;XP_013367247;XP_013367248 MODEL 8712742 protein-coding CUNH1orf122 chromosome unknown C1orf122 homolog NW_004955452 15579225 15580362 + 102014638 AGCD01044488;GBDF01049582;XM_005395219 XP_005395276 MODEL 8898079 pseudo LOC102011619 60S ribosomal protein L6-like NW_004955405 15379752 15381035 + 102011619 AGCD01004944 MODEL 9003446 protein-coding LOC102024531 PC-esterase domain-containing protein 1A-like NW_004955457 2923724 2925741 - 102024531 AGCD01046755;AGCD01046756;GBDF01209626;XM_013520735 XP_013376189 MODEL 8902892 ncrna LOC102012812 uncharacterized LOC102012812 NW_004955446 2324596 2337167 - 102012812 AGCD01039981;GBDF01040343;XR_001235685 MODEL 8868865 protein-coding Il7 interleukin 7 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN bone resorption (ortholog); cellular response to hypoxia (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); COVID-19 (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955444 2365077 2400953 + 102013224 AGCD01038758;AGCD01038759;AGCD01038760;AGCD01038761;GBCE01057367;GBDK01360525;XM_013518182 XP_013373636 MODEL 8728610 protein-coding Dio2 iodothyronine deiodinase 2 ENCODES a protein that exhibits thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); lipid metabolic process (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955438 3946830 3961049 - 102023633 AGCD01035034;GBCE01029600;XM_005390230;XM_013517246 XP_005390287;XP_013372700 MODEL 10093347 ncrna LOC106149958 uncharacterized LOC106149958 NW_004955458 3546091 3548041 + 106149958 AGCD01047317;XR_001236452 MODEL 39134366 misc_rna 7SK 7SK RNA 8831264 protein-coding Cpt1b carnitine palmitoyltransferase 1B ENCODES a protein that exhibits carnitine O-palmitoyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); carnitine shuttle (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; forkhead class A signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); Liver Neoplasms (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955413 33578734 33588055 - 102007213 AGCD01014680;AGCD01014681;GBDF01007954;XM_005379590;XM_005379591;XM_005379592;XM_013511620 XP_005379647;XP_005379648;XP_005379649;XP_013367074 MODEL 8915616 pseudo LOC102017683 fatty acid-binding protein, liver-like NW_004955424 757151 760005 + 102017683 AGCD01024207 MODEL 8840768 protein-coding Btg2 BTG anti-proliferation factor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); associative learning (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); brain ischemia (ortholog); breast cancer (ortholog) NW_004955406 39303221 39307308 + 102011732 AGCD01006625;GBCE01078173;XM_005375265 XP_005375322 MODEL 9065089 protein-coding Drd3 dopamine receptor D3 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); dopamine neurotransmitter receptor activity, coupled via Gi/Go (ortholog); protein domain specific binding (ortholog); INVOLVED IN acid secretion (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); PARTICIPATES IN dopamine signaling pathway; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH absence epilepsy (ortholog); Alzheimer's disease (ortholog); amnestic disorder (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); dopaminergic synapse (ortholog) NW_004955427 14219519 14252178 - 102009301 AGCD01027268;XM_013515044;XM_013515045 XP_013370498;XP_013370499 MODEL 8718430 protein-coding Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN ADP catabolic process (ortholog); cellular response to aluminum ion (ortholog); cellular response to interferon-alpha (ortholog); ASSOCIATED WITH demyelinating disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN basement membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955507 2035918 2141327 + 102010183 AGCD01065577;AGCD01065578;AGCD01065579;AGCD01065580;GBDF01127217;XM_005407549;XM_005407551;XM_005407553;XM_013506151;XM_013506153 XP_005407606;XP_005407608;XP_005407610;XP_013361605;XP_013361607 MODEL 8973419 protein-coding LOC102019301 membrane-spanning 4-domains subfamily A member 6D-like NW_004955511 4880379 4889743 - 102019301 AGCD01066538;GBCQ01057843;XM_005408078;XM_005408079 XP_005408135;XP_005408136 MODEL 8713447 protein-coding Eif2b2 eukaryotic translation initiation factor 2B subunit beta ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN central nervous system development (ortholog); cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Leukoencephalopathies (ortholog); leukoencephalopathy with vanishing white matter (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955523 553356 559376 - 102014819 AGCD01068464;GBDF01154329;XM_005409380 XP_005409437 MODEL 39132052 rrna 5S_rRNA 5S ribosomal RNA 8830696 pseudo LOC102012028 pre-mRNA 3' end processing protein WDR33 pseudogene NW_004955439 20471999 20472958 - 102012028 AGCD01036114 MODEL 8754528 protein-coding Acap2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament-based process (ortholog); cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); FOUND IN endosome membrane (ortholog); plasma membrane (ortholog); ruffle (ortholog) NW_004955420 13649482 13777353 + 102025801 AGCD01020926;AGCD01020927;AGCD01020928;AGCD01020929;GBDF01188123;XM_005383183;XM_005383184 XP_005383240;XP_005383241 MODEL 8935287 pseudo LOC102009717 cyclin-C-like NW_004955416 11195941 11196968 + 102009717 AGCD01017180;XR_260457 MODEL 8900587 protein-coding LOC102008531 BRCA1-A complex subunit RAP80-like NW_004955417 1529837 1666641 - 102008531 AGCD01017837;AGCD01017838;AGCD01017839;AGCD01017840;AGCD01017841;AGCD01017842;AGCD01017843;AGCD01017844;XM_013512696 XP_013368150 MODEL 8738028 ncrna LOC102009292 uncharacterized LOC102009292 NW_004955423 372935 383250 + 102009292 AGCD01023411;GBDI01297765;XR_260937 MODEL 8967426 ncrna LOC102011192 uncharacterized LOC102011192 NW_004955469 9744913 9758948 + 102011192 AGCD01052516;GBCB01088434;XR_263445 MODEL 8926598 gene LOC102008184 Ig lambda-2 chain V region-like NW_004955455 6522852 6523304 + 102008184 AGCD01045801;XM_005396573 MODEL 8874612 protein-coding Kcnk5 potassium two pore domain channel subfamily K member 5 ENCODES a protein that exhibits outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN potassium ion export across plasma membrane (ortholog); potassium ion import across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH status epilepticus (ortholog) NW_004955437 4275806 4313772 + 102011804 AGCD01034364;GBBH01040953;XM_005389599;XM_005389600;XM_005389602;XM_005389603;XM_013517095;XM_013517096 XP_005389656;XP_005389657;XP_005389659;XP_005389660;XP_013372549;XP_013372550 MODEL 39131853 rrna 5S_rRNA 5S ribosomal RNA 9052937 pseudo LOC102016187 heterogeneous nuclear ribonucleoprotein A3-like NW_004955516 415318 416412 - 102016187 AGCD01067384 MODEL 8907702 protein-coding LOC102013935 putative olfactory receptor 14L1 NW_004955418 30381369 30382328 + 102013935 AGCD01019515;XM_005382374 XP_005382431 MODEL 8952435 protein-coding Dapk1 death associated protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to hydroperoxide (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955432 29925 254327 - 102021789 AGCD01030554;AGCD01030555;AGCD01030556;AGCD01030557;AGCD01030558;AGCD01030559;AGCD01030560;GBDJ01028198;XM_013516025;XM_013516026;XM_013516027 XP_013371479;XP_013371480;XP_013371481 MODEL 39134060 misc_rna 7SK 7SK RNA 8885207 protein-coding Ift56 intraflagellar transport 56 ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH BILIARY, RENAL, NEUROLOGIC, AND SKELETAL SYNDROME (ortholog); Caroli disease (ortholog); hydrocephalus (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955494 3861679 3905499 - 102028648 AGCD01061488;AGCD01061489;AGCD01061490;GBDF01120106;XM_005405446;XM_005405447 XP_005405503;XP_005405504 MODEL 8940802 protein-coding LOC102014302 vomeronasal type-1 receptor 2-like NW_004955569 818117 819010 + 102014302 AGCD01074620;XM_013509362 XP_013364816 MODEL 8927618 ncrna LOC102016566 uncharacterized LOC102016566 NW_004955408 23253468 23276002 - 102016566 AGCD01008586;AGCD01008587;GBDI01211247;XR_259704 MODEL 8752924 protein-coding Il7r interleukin 7 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-7 receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); cell morphogenesis (ortholog); cellular homeostasis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); colon cancer (ortholog); COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955426 20785896 20818512 + 102009522 AGCD01026575;GBDF01110704;XM_005386201;XM_005386202;XM_013515007;XM_013515008 XP_005386258;XP_005386259;XP_013370461;XP_013370462 MODEL 8782591 protein-coding LOC102003846 aldose reductase NW_004955410 33554985 33569352 + 102003846 AGCD01011372;AGCD01011373;GBCQ01005098;XM_005377536 XP_005377593 MODEL 8722920 ncrna LOC102021062 uncharacterized LOC102021062 NW_004955447 10776188 10778367 - 102021062 AGCD01040889;GBDF01017047;XR_262418 MODEL 8725555 pseudo LOC102015407 uncharacterized protein C12orf45 homolog pseudogene NW_004955419 3283262 3285627 + 102015407 AGCD01019716 MODEL 8925038 protein-coding Ddx47 DEAD-box helicase 47 INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); RNA splicing (ortholog); rRNA processing (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN nucleolus (ortholog) NW_004955413 9703777 9718802 + 102019492 AGCD01013910;GBDK01136315;XM_005378972 XP_005379029 MODEL 8982307 protein-coding LOC102007793 solute carrier family 22 member 13 NW_004955427 25740144 25743458 + 102007793 AGCD01027551;GBDF01180895;XM_013515058 XP_013370512 MODEL 8926822 ncrna LOC102015808 uncharacterized LOC102015808 NW_004955408 11586604 11635608 - 102015808 AGCD01008312;AGCD01008313;AGCD01008314;XR_259679 MODEL 8714546 protein-coding Cst7 cystatin F ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); peptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); negative regulation of microglial cell activation (ortholog); positive regulation of myelination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog) NW_004955415 31082978 31086379 + 102008720 AGCD01016669;GBBH01155183;XM_005380981 XP_005381038 MODEL 8866396 protein-coding LOC102013215 olfactory receptor 12-like NW_004955542 1185898 1186848 - 102013215 AGCD01071490;XM_005411242 XP_005411299 MODEL 9027259 pseudo LOC102011620 60S ribosomal protein L27 pseudogene NW_004955452 12777543 12777937 - 102011620 AGCD01044365 MODEL 9038035 protein-coding CUNH1orf141 chromosome unknown C1orf141 homolog NW_004955423 23893703 23936230 + 102005272 AGCD01024023;AGCD01024024;AGCD01024025;GBDF01049937;XM_013514486;XM_013514487;XM_013514488;XM_013514489;XM_013514490;XM_013514491;XM_013514492;XM_013514493;XM_013514494 XP_013369940;XP_013369941;XP_013369942;XP_013369943;XP_013369944;XP_013369945;XP_013369946;XP_013369947;XP_013369948 MODEL 8832637 ncrna LOC102024533 uncharacterized LOC102024533 NW_004955408 35437922 35476125 - 102024533 AGCD01008943;AGCD01008944;AGCD01008945;AGCD01008946;GBDJ01064858;XR_259733 MODEL 8847120 ncrna LOC102008918 uncharacterized LOC102008918 NW_004955408 4765453 4769584 - 102008918 AGCD01008118;GBDF01188494;XR_259660 MODEL 9047679 protein-coding Fcgr2b Fc fragment of IgG receptor IIb ENCODES a protein that exhibits amyloid-beta binding (ortholog); IgG binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN cellular response to amyloid-beta (ortholog); cellular response to lipopolysaccharide (ortholog); cerebellum development (ortholog); PARTICIPATES IN clathrin-mediated endocytosis pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); dendritic spine (ortholog) NW_004955462 14639396 14653801 - 102018697 AGCD01049453;GBDI01129457;XM_005398294;XM_005398296;XM_013521429;XM_013521430 XP_005398351;XP_005398353;XP_013376883;XP_013376884 MODEL 8872991 protein-coding Ermn ermin ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); morphogenesis of a branching structure (ortholog); regulation of cell projection organization (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); filopodium (ortholog) NW_004955449 16056735 16064734 + 102017079 AGCD01042208;GBDK01341423;XM_005393411 XP_005393468 MODEL 10193911 ncrna LOC106149959 uncharacterized LOC106149959 NW_004955458 5329029 5330856 - 106149959 AGCD01047476;GBDI01105749;XR_001236453 MODEL 8879138 protein-coding Grem1 gremlin 1, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); protein homodimerization activity (ortholog); protein sequestering activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); familial adenomatous polyposis (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) NW_004955416 1812725 1825528 - 102027298 AGCD01016841;GBDJ01173171;XM_005381174 XP_005381231 MODEL 8851476 protein-coding Hspa4l heat shock protein family A (Hsp70) member 4 like ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN protein folding (ortholog); response to unfolded protein (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955428 13589532 13644079 - 102006692 AGCD01027959;AGCD01027960;GBDK01080191;XM_005386743;XM_005386747;XM_013515311 XP_005386800;XP_005386804;XP_013370765 MODEL 8890293 protein-coding Cpt1c carnitine palmitoyltransferase 1C ENCODES a protein that exhibits carnitine O-palmitoyltransferase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); fatty acid metabolic process (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 73 (ortholog); melanoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); axon (ortholog); dendrite (ortholog) NW_004955559 1187858 1203523 - 102007475 AGCD01073634;GBCE01162965;XM_005412846;XM_013508972;XM_013508973;XM_013508974;XM_013508975;XM_013508976 XP_005412903;XP_013364426;XP_013364427;XP_013364428;XP_013364429;XP_013364430 MODEL 8745734 pseudo LOC102020316 protein FAM161A pseudogene NW_004955464 7637976 7641348 - 102020316 AGCD01050065 MODEL 8877618 protein-coding Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); apyrase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to interferon-alpha (ortholog); cellular response to interleukin-6 (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); high grade glioma (ortholog); FOUND IN basement membrane (ortholog); cell body (ortholog); cell projection membrane (ortholog) NW_004955513 5070050 5075098 - 102029650 AGCD01066953;GBDI01356592;XM_005408572;XM_005408574 XP_005408629;XP_005408631 MODEL 39132054 rrna 5S_rRNA 5S ribosomal RNA 8999022 pseudo LOC102020679 solute carrier family 25 member 51-like NW_004955492 4358752 4359654 - 102020679 AGCD01060716 MODEL 9014651 ncrna LOC102009719 uncharacterized LOC102009719 NW_004955482 6560784 6566698 + 102009719 AGCD01057403;GBDF01126264;XR_001230965 MODEL 39131854 rrna 5S_rRNA 5S ribosomal RNA 9001663 pseudo LOC102014690 vesicle-associated membrane protein 4 pseudogene NW_004955425 1581875 1582273 - 102014690 AGCD01025234 MODEL 9042548 pseudo LOC102012813 general transcription factor IIH subunit 2-like NW_004955446 10843415 10844092 + 102012813 AGCD01040191 MODEL 8965988 ncrna LOC102010413 uncharacterized LOC102010413 NW_004955440 18515406 18523978 + 102010413 AGCD01036611;AGCD01036612;GBDI01160681;XR_262044 MODEL 8969019 pseudo LOC102021822 uncharacterized LOC102021822 NW_004955449 1866887 1881411 + 102021822 AGCD01041814 MODEL 8790648 ncrna LOC102015411 uncharacterized LOC102015411 NW_004955487 2724146 2728644 + 102015411 AGCD01059266;GBDF01277703;XR_263983 MODEL 8803011 protein-coding Kcnk6 potassium two pore domain channel subfamily K member 6 ENCODES a protein that exhibits potassium channel activity (ortholog); INVOLVED IN negative regulation of systemic arterial blood pressure (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); regulation of lysosome size (ortholog); ASSOCIATED WITH brain infarction (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955468 1108025 1117366 - 102016577 AGCD01051756;AGCD01051757;GBBH01034366;XM_005399855 XP_005399912 MODEL 8937019 pseudo LOC102013939 FGFR1 oncogene partner 2 homolog pseudogene NW_004955486 342946 343511 - 102013939 AGCD01058839 MODEL 8923645 protein-coding Dio3 iodothyronine deiodinase 3 ENCODES a protein that exhibits thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); brown fat cell proliferation (ortholog); positive regulation of multicellular organism growth (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog) NW_004955538 1042949 1045038 + 102022013 AGCD01071043;GBCE01078884;XM_005415334 XP_005415391 MODEL 39133798 misc_rna 7SK 7SK RNA 39134367 misc_rna 7SK 7SK RNA 8790384 protein-coding LOC102005661 hematopoietic prostaglandin D synthase-like NW_004955405 437618 453991 + 102005661 AGCD01004560;GBDK01126143;XM_005374245;XR_001235167;XR_001235168;XR_259351 XP_005374302 MODEL 9065926 protein-coding Drd4 dopamine receptor D4 ENCODES a protein that exhibits dopamine binding (ortholog); dopamine neurotransmitter receptor activity (ortholog); dopamine neurotransmitter receptor activity, coupled via Gi/Go (ortholog); INVOLVED IN adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); arachidonate secretion (ortholog); PARTICIPATES IN dopamine signaling pathway; dopamine signaling pathway via D2 family of receptors; excitatory synaptic transmission pathway; ASSOCIATED WITH alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell cortex (ortholog) NW_004955476 11424347 11426962 - 102011656 AGCD01055457;GBDI01244869;XM_013502972 XP_013358426 MODEL 9043830 ncrna LOC102012030 uncharacterized LOC102012030 NW_004955442 16080957 16097609 + 102012030 AGCD01037891;GBDF01225468;XR_262160;XR_262161 MODEL 8734333 protein-coding Btg3 BTG anti-proliferation factor 3 INVOLVED IN negative regulation of mitotic cell cycle (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH cholestasis (ortholog); renal cell carcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955407 18927211 18939576 - 102012927 AGCD01007289;GBCE01095553;GBDF01047524;XM_013503870 XP_013359324 MODEL 8782188 protein-coding LOC102013593 interferon lambda-2 NW_004955468 254857 256530 - 102013593 AGCD01051686;XM_013522285 XP_013377739 MODEL 9062087 protein-coding Eif2b3 eukaryotic translation initiation factor 2B subunit gamma ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); oligodendrocyte development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Leukoencephalopathies (ortholog); leukoencephalopathy with vanishing white matter (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955464 13254228 13378832 + 102006109 AGCD01050265;AGCD01050266;AGCD01050267;AGCD01050268;AGCD01050269;AGCD01050270;AGCD01050271;AGCD01050272;AGCD01050273;AGCD01050274;GBDF01071578;XM_005398721;XM_005398723;XM_005398724 XP_005398778;XP_005398780;XP_005398781 MODEL 8989104 ncrna LOC102008922 uncharacterized LOC102008922 NW_004955460 11145349 11152507 + 102008922 AGCD01048629;AGCD01048630;GBCQ01032294;XR_001236540 MODEL 9024737 protein-coding LOC102008533 cytochrome c oxidase subunit 7C, mitochondrial ASSOCIATED WITH Alzheimer's disease (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955418 24413883 24416530 - 102008533 AGCD01019331;GBCE01002366;XM_005382301 XP_005382358 MODEL 8872805 pseudo LOC102008185 ATP-dependent RNA helicase DDX3X-like NW_004955407 21081761 21090500 + 102008185 AGCD01007350 MODEL 8929971 pseudo LOC102009294 volume-regulated anion channel subunit LRRC8D-like NW_004955497 504156 510636 - 102009294 AGCD01062420;AGCD01062421 MODEL 9066675 pseudo LOC102021063 chromobox protein homolog 3 pseudogene NW_004955578 1108396 1109003 - 102021063 AGCD01075510 MODEL 8801345 protein-coding Ankrd44 ankyrin repeat domain 44 ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, SEIZURES, AND ABSENT LANGUAGE (ortholog) NW_004955403 3228360 3476988 + 102015909 AGCD01001759;AGCD01001760;AGCD01001761;AGCD01001762;AGCD01001763;AGCD01001764;AGCD01001765;AGCD01001766;GBDK01056004;XM_005373269;XM_005373270;XM_013512075;XM_013512078;XM_013512080;XM_013512083;XM_013512086;XM_013512090;XM_013512095;XM_013512098;XM_013512100 XP_005373326;XP_005373327;XP_013367529;XP_013367532;XP_013367534;XP_013367537;XP_013367540;XP_013367544;XP_013367549;XP_013367552;XP_013367554 MODEL 8937744 protein-coding Jakmip3 Janus kinase and microtubule interacting protein 3 NW_004955477 9681239 9827704 + 102023353 AGCD01055682;AGCD01055683;AGCD01055684;AGCD01055685;AGCD01055686;GBCE01046959;XM_013503115;XM_013503116;XM_013503117;XM_013503118;XM_013503119;XM_013503120;XM_013503121;XM_013503122;XM_013503123;XM_013503124;XM_013503125;XM_013503126;XM_013503127 XP_013358569;XP_013358570;XP_013358571;XP_013358572;XP_013358573;XP_013358574;XP_013358575;XP_013358576;XP_013358577;XP_013358578;XP_013358579;XP_013358580;XP_013358581 MODEL 8840649 ncrna LOC102007794 uncharacterized LOC102007794 NW_004955506 4248624 4261163 - 102007794 AGCD01065330;GBDI01281509;XR_264348 MODEL 8818400 protein-coding CUNH1orf146 chromosome unknown C1orf146 homolog INVOLVED IN reciprocal meiotic recombination (ortholog); synaptonemal complex assembly (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN chromosome (ortholog) NW_004955423 2233445 2251205 - 102024694 AGCD01023470;GBDF01087039;XM_005385054 XP_005385111 MODEL 8863978 protein-coding Cimip7 ciliary microtubule inner protein 7 NW_004955532 1163399 1172197 - 102011476 AGCD01070167;AGCD01070168;GBDF01051831;XM_013507577 XP_013363031 MODEL 9012535 pseudo LOC102012815 poly(rC)-binding protein 2 pseudogene NW_004955576 1428099 1429219 + 102012815 AGCD01075376 MODEL 10136571 ncrna LOC106149960 uncharacterized LOC106149960 NW_004955458 5327632 5328448 - 106149960 AGCD01047476;GBDK01044031;XR_001236454;XR_001236455 MODEL 8946459 protein-coding Fcgrt Fc gamma receptor and transporter ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); IgG binding (ortholog); peptide antigen binding (ortholog) NW_004955559 1320441 1331962 - 102013122 AGCD01073640;GBDJ01017253;XM_005412869 XP_005412926 MODEL 8767239 protein-coding Grem2 gremlin 2, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); heparin binding (ortholog); identical protein binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); determination of dorsal identity (ortholog); embryonic body morphogenesis (ortholog); ASSOCIATED WITH Selective Tooth Agenesis 9 (ortholog); FOUND IN extracellular space (ortholog) NW_004955406 11245960 11343677 + 102020525 AGCD01005884;GBCE01052016;XM_005374827;XM_013520576 XP_005374884;XP_013376030 MODEL 8702485 protein-coding Hspa5 heat shock protein family A (Hsp70) member 5 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to antibiotic (ortholog); cellular response to calcium ion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); asbestosis (ortholog); FOUND IN cell surface (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955419 3055420 3060208 + 102015520 AGCD01019701;GBDF01006448;XM_005382466 XP_005382523 MODEL 9067242 protein-coding Drd5 dopamine receptor D5 ENCODES a protein that exhibits dopamine binding (ortholog); dopamine neurotransmitter receptor activity (ortholog); dopamine neurotransmitter receptor activity, coupled via Gs (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); associative learning (ortholog); PARTICIPATES IN dopamine signaling pathway; dopamine signaling pathway via D1 family of receptors; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); Benign Essential Blepharospasm (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axon (ortholog); brush border membrane (ortholog) NW_004955514 5450495 5452282 + 102029320 AGCD01067155;XM_005408842 XP_005408899 MODEL 9015767 ncrna LOC102016192 uncharacterized LOC102016192 NW_004955435 13810505 13822088 - 102016192 AGCD01033212;GBDF01027837;XR_261688 MODEL 39132056 rrna 5S_rRNA 5S ribosomal RNA 8747650 protein-coding Cpt2 carnitine palmitoyltransferase 2 ENCODES a protein that exhibits acyltransferase activity (ortholog); carnitine O-palmitoyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); carnitine shuttle (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine palmitoyltransferase I deficiency pathway; carnitine-acylcarnitine translocase deficiency; ASSOCIATED WITH brain disease (ortholog); carnitine palmitoyltransferase II deficiency (ortholog); Carnitine Palmitoyltransferase II Deficiency, Infantile (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955464 5942986 5970325 - 102012746 AGCD01050015;AGCD01050016;AGCD01050017;GBBH01150425;XM_005398561 XP_005398618 MODEL 9015984 protein-coding Ddx49 DEAD-box helicase 49 ENCODES a protein that exhibits RNA helicase activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); regulation of rRNA stability (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955524 2760692 2767709 - 102004196 AGCD01068834;GBCE01077604;XM_005409601 XP_005409658 MODEL 8885898 protein-coding Dapk2 death associated protein kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN anoikis (ortholog); intracellular signal transduction (ortholog); neutrophil migration (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); colorectal cancer (ortholog); Hepatomegaly (ortholog); FOUND IN cytoplasm (ortholog) NW_004955450 11348566 11443908 + 102021824 AGCD01042659;AGCD01042660;AGCD01042661;GBCE01115793;XM_013519004 XP_013374458 MODEL 8786420 protein-coding Entpd3 ectonucleoside triphosphate diphosphohydrolase 3 ENCODES a protein that exhibits apyrase activity (ortholog); nucleoside diphosphate phosphatase activity (ortholog); ribonucleoside triphosphate phosphatase activity (ortholog); INVOLVED IN nucleoside diphosphate catabolic process (ortholog); nucleoside triphosphate catabolic process (ortholog); ribonucleoside diphosphate catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 29445252 29471024 - 102012656 AGCD01021502;AGCD01021503;AGCD01021504;GBCQ01152313;GBDF01160505;XM_005383579 XP_005383636 MODEL 8767783 ncrna LOC102015809 uncharacterized LOC102015809 NW_004955408 23149825 23157092 - 102015809 AGCD01008584;GBBH01141898;XR_001232380;XR_259702 MODEL 8840785 protein-coding LOC102013216 uncharacterized LOC102013216 NW_004955438 14271926 14297748 + 102013216 AGCD01035336;AGCD01035337;GBDF01294416;XM_005390442 XP_005390499 MODEL 8948781 pseudo LOC102014696 uncharacterized LOC102014696 NW_004955509 4173999 4185221 - 102014696 AGCD01066055 MODEL 8813644 protein-coding LOC102017684 complement C1q-like protein 4 NW_004955500 8138111 8141865 - 102017684 AGCD01063981;GBDI01140203;XM_005415350 XP_005415407 MODEL 8712019 protein-coding Ift57 intraflagellar transport 57 INVOLVED IN apoptotic process (ortholog); heart looping (ortholog); left/right pattern formation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Huntington's disease (ortholog); orofaciodigital syndrome XVIII (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955427 8814298 8871671 - 102013524 AGCD01027078;AGCD01027079;GBBH01033666;XM_005386354 XP_005386411 MODEL 8840528 pseudo LOC102021823 isocitrate dehydrogenase [NADP], mitochondrial pseudogene NW_004955402 16758485 16759946 + 102021823 AGCD01000488 MODEL 9041612 protein-coding Ankrd45 ankyrin repeat domain 45 INVOLVED IN cell population proliferation (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 13842571 13882625 - 102007295 AGCD01005954;GBDF01308215;XM_005374871 XP_005374928 MODEL 9055721 pseudo LOC102014307 U3 small nucleolar ribonucleoprotein protein MPP10 pseudogene NW_004955402 60700541 60701551 - 102014307 AGCD01001604 MODEL 8802108 protein-coding Ermp1 endoplasmic reticulum metallopeptidase 1 INVOLVED IN cellular response to oxidative stress (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); chronic kidney disease (ortholog) NW_004955434 9772667 9825048 - 102012355 AGCD01032309;AGCD01032310;GBDF01156541;XM_013516296 XP_013371750 MODEL 8700923 protein-coding Kcnk7 potassium two pore domain channel subfamily K member 7 NW_004955422 19666974 19670449 + 102005052 AGCD01023026;GBCB01035404;XM_005384475 XP_005384532 MODEL 39133799 misc_rna 7SK 7SK RNA 8733101 protein-coding LOC102016567 olfactory receptor 6C2-like NW_004955458 2956357 2957295 + 102016567 AGCD01047260;XM_005397248 XP_005397305 MODEL 8797383 protein-coding LOC102003847 NADH-cytochrome b5 reductase-like NW_004955464 5065935 5087968 + 102003847 AGCD01049998;AGCD01049999;GBDJ01349008;XM_005398530;XM_005398531;XM_013521665 XP_005398587;XP_005398588;XP_013377119 MODEL 8953683 protein-coding LOC102011194 cytochrome c oxidase assembly factor 4 homolog, mitochondrial FOUND IN mitochondrion (ortholog) NW_004955414 17658281 17661867 + 102011194 AGCD01015247;AGCD01015248;GBDF01220602;XM_005379932 XP_005379989 MODEL 8875611 ncrna LOC102012033 uncharacterized LOC102012033 NW_004955444 1600025 1605604 + 102012033 AGCD01038732;GBDF01041654;XR_001235529 MODEL 9055475 protein-coding Eif2b4 eukaryotic translation initiation factor 2B subunit delta ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); myelination (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Leukoencephalopathies (ortholog); leukoencephalopathy with vanishing white matter (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955469 9328900 9334463 - 102030410 AGCD01052498;GBBH01089100;XM_005400493;XM_005400495;XM_005400497 XP_005400550;XP_005400552;XP_005400554 MODEL 9014656 protein-coding LOC102009720 olfactory receptor 2AJ1-like NW_004955418 30036459 30037427 - 102009720 AGCD01019499;XM_005382364 XP_005382421 MODEL 8883817 ncrna LOC102009295 uncharacterized LOC102009295 NW_004955424 20161293 20182303 - 102009295 AGCD01024845;GBDF01236664;XR_261089 MODEL 8889750 protein-coding LOC102010423 olfactory receptor 7G2-like NW_004955563 285695 286633 - 102010423 AGCD01074059;XM_013509134 XP_013364588 MODEL 8800620 pseudo LOC102011623 60S ribosomal protein L21 pseudogene NW_004955453 11145197 11145736 + 102011623 AGCD01044801 MODEL 8999716 protein-coding LOC102019302 olfactory receptor 8K5-like NW_004955511 1415677 1416615 + 102019302 AGCD01066366;XM_005408231 XP_005408288 MODEL 8725556 pseudo LOC102015413 40S ribosomal protein S24 pseudogene NW_004955423 1431836 1432412 + 102015413 AGCD01023434 MODEL 8843475 ncrna LOC102024534 uncharacterized LOC102024534 NW_004955458 13179440 13185896 + 102024534 AGCD01047796;GBDF01253149;XR_262996 MODEL 8929419 pseudo LOC102013940 28S ribosomal protein S36, mitochondrial pseudogene NW_004955492 8167760 8168071 + 102013940 AGCD01060808;XM_005404994 MODEL 39134368 misc_rna 7SK 7SK RNA 8841062 protein-coding Dip2a disco interacting protein 2 homolog A ENCODES a protein that exhibits acetate-CoA ligase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); dendritic spine morphogenesis (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); long QT syndrome (ortholog); FOUND IN cell surface (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955407 42857297 42961831 + 102020638 AGCD01007898;AGCD01007899;AGCD01007900;AGCD01007901;AGCD01007902;GBBH01057166;GBCE01095801;XM_005375936 XP_005375993 MODEL 8860011 pseudo LOC102007795 zinc finger FYVE domain-containing protein 1 pseudogene NW_004955429 6957166 6968391 + 102007795 AGCD01028571;AGCD01028572 MODEL 8886301 ncrna LOC102005663 uncharacterized LOC102005663 NW_004955405 42749975 42752628 - 102005663 AGCD01005586;GBDF01179322;XR_259461 MODEL 8937125 ncrna LOC102020319 uncharacterized LOC102020319 NW_004955413 9761188 9765424 - 102020319 AGCD01013910;GBCE01033977;XR_260074 MODEL 8878592 ncrna LOC102008924 uncharacterized LOC102008924 NW_004955410 24913016 24966433 + 102008924 AGCD01011136;GBDK01310034;XR_259862 MODEL 9053634 pseudo LOC102020680 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 pseudogene NW_004955492 7170614 7171540 + 102020680 AGCD01060778 MODEL 8967512 protein-coding Btg4 BTG anti-proliferation factor 4 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN maternal-to-zygotic transition of gene expression (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 8 (ortholog) NW_004955412 13137273 13250261 - 102013397 AGCD01012829;GBBH01185406;XM_005378059;XM_013511008;XM_013511009;XM_013511010;XM_013511011;XM_013511012;XM_013511014;XM_013511015;XM_013511016 XP_005378116;XP_013366462;XP_013366463;XP_013366464;XP_013366465;XP_013366466;XP_013366468;XP_013366469;XP_013366470 MODEL 39134061 misc_rna 7SK 7SK RNA 8716554 protein-coding Cst8 cystatin 8 ASSOCIATED WITH male infertility (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955415 30459008 30466128 + 102005461 AGCD01016664;GBDF01008792;XM_005380971;XM_005380972 XP_005381028;XP_005381029 MODEL 8841963 protein-coding Fcho1 FCH and mu domain containing endocytic adaptor 1 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); positive regulation of T cell activation (ortholog); ASSOCIATED WITH Immunodeficiency 76 (ortholog); pneumoconiosis (ortholog); severe congenital neutropenia (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cytosol (ortholog) NW_004955524 3451204 3470163 - 102013330 AGCD01068899;AGCD01068900;AGCD01068901;GBBH01207271;XM_005409537;XM_005409542;XM_013507319;XM_013507320;XM_013507321 XP_005409594;XP_005409599;XP_013362773;XP_013362774;XP_013362775 MODEL 8877072 protein-coding LOC102008186 gamma-crystallin B NW_004955457 6977737 6979696 + 102008186 AGCD01046862;XM_005396970 XP_005397027 MODEL 39131496 protein-coding HSPA6 heat shock protein family A (Hsp70) member 6 8730198 pseudo LOC102012039 creatine kinase U-type, mitochondrial pseudogene NW_004955447 18787639 18792112 - 102012039 AGCD01041191 MODEL 8852860 ncrna LOC102015810 uncharacterized LOC102015810 NW_004955458 7861529 7899431 + 102015810 AGCD01047592;AGCD01047593;AGCD01047594;GBDF01249843;XR_001236442;XR_262987 MODEL 8947551 protein-coding Dapk3 death associated protein kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to type II interferon (ortholog); FOUND IN actin filament (ortholog); chromosome, centromeric region (ortholog); cytosol (ortholog) NW_004955495 4809475 4822210 + 102015644 AGCD01061951;AGCD01061952;GBDF01046832;XM_005405820;XM_005405821;XM_005405822 XP_005405877;XP_005405878;XP_005405879 MODEL 8732267 protein-coding LOC102014701 olfactory receptor 5L1-like NW_004955511 4990168 4991042 + 102014701 AGCD01066541;XM_013506414 XP_013361868 MODEL 8905879 protein-coding Il9 interleukin 9 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-9 receptor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Airway Obstruction (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog) NW_004955408 30950816 30953571 - 102012504 AGCD01008818;GBDF01218996;XM_005376487 XP_005376544 MODEL 8918722 protein-coding CUNH1orf159 chromosome unknown C1orf159 homolog NW_004955486 9632940 9659682 + 102003555 AGCD01059194;AGCD01059195;GBCE01020372;XM_005404258;XM_005404260;XM_013504296;XM_013504297;XM_013504298;XM_013504300;XM_013504301;XM_013504302;XM_013504303;XR_001231143 XP_005404315;XP_005404317;XP_013359750;XP_013359751;XP_013359752;XP_013359754;XP_013359755;XP_013359756;XP_013359757 MODEL 8799190 protein-coding LOC102013596 olfactory receptor 10A3 NW_004955414 23775674 23776654 - 102013596 AGCD01015522;XM_005380207 XP_005380264 MODEL 8831853 protein-coding Ift74 intraflagellar transport 74 ENCODES a protein that exhibits beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); epidermis development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); autism spectrum disorder (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955472 7779705 7872423 - 102027292 AGCD01053629;AGCD01053630;AGCD01053631;AGCD01053632;AGCD01053633;GBDI01297180;XM_005401156 XP_005401213 MODEL 8871916 protein-coding Cinp cyclin dependent kinase 2 interacting protein ENCODES a protein that exhibits preribosome binding (ortholog); INVOLVED IN DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN nucleus (ortholog) NW_004955538 1649068 1655146 - 102029794 AGCD01071078;GBDF01049565;GBDF01074102;XM_005410749 XP_005410806 MODEL 8916150 protein-coding LOC102014308 MOB-like protein phocein NW_004955403 3035698 3050557 - 102014308 AGCD01001745;GBBH01088265;GBDF01085938;XM_013512065 XP_013367519 MODEL 9057895 pseudo LOC102008535 plasma membrane calcium-transporting ATPase 1-like NW_004955483 8088963 8090785 + 102008535 AGCD01057826 MODEL 8764433 protein-coding LOC102012817 histone H2B type 3-B NW_004955581 91596 93803 - 102012817 AGCD01075657;XM_005414232 XP_005414289 MODEL 9051784 pseudo LOC102005667 uncharacterized LOC102005667 NW_004955454 13267651 13286711 + 102005667 AGCD01045432 MODEL 8958779 ncrna LOC102021064 uncharacterized LOC102021064 NW_004955402 8308752 8322315 + 102021064 AGCD01000193;GBCQ01085996;XR_001236468;XR_259044 MODEL 8711780 protein-coding Grhl1 grainyhead like transcription factor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN desmosome organization (ortholog); epidermis development (ortholog); establishment of skin barrier (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 5407187 5432828 + 102027193 AGCD01059332;GBDF01305732;GBDF01305734;XM_005404405 XP_005404462 MODEL 8809070 protein-coding Drg1 developmentally regulated GTP binding protein 1 ENCODES a protein that exhibits GTPase activity (ortholog); microtubule binding (ortholog); potassium ion binding (ortholog); INVOLVED IN positive regulation of microtubule polymerization (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH Contracture (ortholog); Neurodevelopmental Disorders (ortholog); TAN-ALMURSHEDI SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955455 5588313 5608091 + 102008916 AGCD01045742;AGCD01045743;GBDF01054224;XM_005396311 XP_005396368 MODEL 9010498 protein-coding LOC102016193 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like NW_004955435 22559143 22594210 + 102016193 AGCD01033513;GBCQ01030451;XM_005389081;XM_005389082;XM_005389083;XM_005389084 XP_005389138;XP_005389139;XP_005389140;XP_005389141 MODEL 8741213 protein-coding Acap3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN neuron migration (ortholog); regulation of neuron projection development (ortholog); FOUND IN growth cone (ortholog) NW_004955486 9495087 9508047 + 102025015 AGCD01059188;GBBH01228029;XM_005404234;XM_005404235;XM_013504190 XP_005404291;XP_005404292;XP_013359644 MODEL 8913038 protein-coding Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN astrocyte development (ortholog); astrocyte differentiation (ortholog); cytoplasmic translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Leukoencephalopathies (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) NW_004955420 23313405 23322748 - 102027533 AGCD01021242;GBCQ01099142;XM_005383350 XP_005383407 MODEL 8796164 protein-coding LOC102013217 solute carrier family 22 member 1 NW_004955439 20691662 20716577 - 102013217 AGCD01036124;GBDI01310983;XM_005390705;XM_013517430 XP_005390762;XP_013372884 MODEL 8752679 protein-coding Cptp ceramide-1-phosphate transfer protein ENCODES a protein that exhibits ceramide 1-phosphate binding (ortholog); ceramide 1-phosphate transfer activity (ortholog); phospholipid binding (ortholog); INVOLVED IN ceramide 1-phosphate transport (ortholog); glycolipid transport (ortholog); negative regulation of autophagy (ortholog); FOUND IN cytosol (ortholog); trans-Golgi network membrane (ortholog) NW_004955486 9475520 9478925 - 102024686 AGCD01059187;GBDK01239251;XM_005404233 XP_005404290 MODEL 8792406 pseudo LOC102009303 39S ribosomal protein L28, mitochondrial pseudogene NW_004955428 16029765 16030480 - 102009303 AGCD01028014 MODEL 8746465 protein-coding LOC102017688 olfactory receptor 8K3-like NW_004955511 1324682 1325641 + 102017688 AGCD01066365;XM_005408230 XP_005408287 MODEL 9065288 protein-coding LOC102021828 zinc finger protein 883-like NW_004955624 123806 130903 - 102021828 AGCD01077437;XM_013510160 XP_013365614 MODEL 10195718 ncrna LOC106149961 uncharacterized LOC106149961 NW_004955458 518276 520439 - 106149961 AGCD01047131;GBDI01370925;XR_001236456 MODEL 10090462 protein-coding A1bg alpha-1-B glycoprotein INVOLVED IN growth hormone receptor signaling pathway (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); schizophrenia (ortholog); FOUND IN extracellular region (ortholog) NW_004955584 1025588 1028459 - 106147574 AGCD01075973;AGCD01075974;XM_013509849 XP_013365303 MODEL 8867808 ncrna LOC102003849 uncharacterized LOC102003849 NW_004955412 914841 917029 + 102003849 AGCD01012505;GBDK01170246;XR_259961 MODEL 8994292 protein-coding Ankrd46 ankyrin repeat domain 46 NW_004955417 15740108 15750627 - 102017771 AGCD01018241;GBDK01143312;XM_013512830;XM_013512831;XM_013512832 XP_013368284;XP_013368285;XP_013368286 MODEL 8782395 protein-coding Ern1 endoplasmic reticulum to nucleus signaling 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); endonuclease activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Acute-On-Chronic Liver Failure (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN AIP1-IRE1 complex (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955478 7720664 7803662 + 102028189 AGCD01055988;AGCD01055989;AGCD01055990;AGCD01055991;GBBH01142310;GBDF01040833;XM_013503183 XP_013358637 MODEL 8948240 protein-coding LOC102016568 retinol dehydrogenase 7-like NW_004955458 4565869 4571429 - 102016568 AGCD01047418;XM_005397334 XP_005397391 MODEL 8889702 protein-coding LOC102008930 cytospin-B NW_004955467 1024739 1302878 + 102008930 AGCD01051247;AGCD01051248;AGCD01051249;AGCD01051250;AGCD01051251;AGCD01051252;AGCD01051253;AGCD01051254;AGCD01051255;AGCD01051256;GBBH01086340;XM_005399302;XM_005399304;XM_013522196;XM_013522197;XM_013522198;XM_013522199;XM_013522200;XM_013522201;XM_013522202;XM_013522203;XM_013522204;XM_013522205 XP_005399359;XP_005399361;XP_013377650;XP_013377651;XP_013377652;XP_013377653;XP_013377654;XP_013377655;XP_013377656;XP_013377657;XP_013377658;XP_013377659 MODEL 8778547 protein-coding LOC102020322 Fc receptor-like protein 2 NW_004955468 9737059 9749159 + 102020322 AGCD01052057;GBBH01066864;XM_013522273 XP_013377727 MODEL 8930540 protein-coding Il9r interleukin 9 receptor ENCODES a protein that exhibits interleukin-9 binding (ortholog); interleukin-9 receptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); cystic fibrosis (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955442 17115207 17128899 + 102010526 AGCD01037937;XM_013517828;XM_013517829 XP_013373282;XP_013373283 MODEL 8972628 protein-coding Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 ENCODES a protein that exhibits CDP phosphatase activity (ortholog); CTPase activity (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN CTP metabolic process (ortholog); GDP catabolic process (ortholog); nucleobase-containing small molecule catabolic process (ortholog); FOUND IN autophagosome membrane (ortholog); Golgi membrane (ortholog) NW_004955403 46609211 46637622 - 102018456 AGCD01002864;AGCD01002865;AGCD01002866;GBBH01116869;XM_005373700;XM_005373701 XP_005373757;XP_005373758 MODEL 8974728 protein-coding Jam2 junctional adhesion molecule 2 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cellular extravasation (ortholog); hematopoietic stem cell migration to bone marrow (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autism spectrum disorder (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cell-cell contact zone (ortholog) NW_004955407 25531891 25599551 + 102010448 AGCD01007510;AGCD01007511;AGCD01007512;GBBH01102041;GBCQ01003827;XM_013503918 XP_013359372 MODEL 8905044 pseudo LOC102010427 signal recognition particle subunit SRP72-like NW_004955569 166179 187432 - 102010427 AGCD01074565;AGCD01074566 MODEL 8878648 protein-coding LOC102009721 chromosome unknown open reading frame, human C6orf62 NW_004955483 2346246 2358156 + 102009721 AGCD01057674;AGCD01057675;GBDF01209925;XM_005403364;XM_005403365 XP_005403421;XP_005403422 MODEL 8758286 protein-coding Ern2 endoplasmic reticulum to nucleus signaling 2 ENCODES a protein that exhibits ATP binding (ortholog); endonuclease activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum quality control compartment (ortholog); IRE1-TRAF2-ASK1 complex (ortholog) NW_004955493 2217187 2233920 - 102014683 AGCD01060935;GBBH01165480;GBBH01165568;XM_013504864 XP_013360318 MODEL 8786768 protein-coding Btk Bruton tyrosine kinase ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN B cell affinity maturation (ortholog); B cell receptor signaling pathway (ortholog); cell maturation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Adenoviridae Infections (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 1 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955503 7483819 7515085 - 102026026 AGCD01064794;GBBH01034514;XM_005406951;XM_005406952 XP_005407008;XP_005407009 MODEL 8735754 pseudo LOC102011624 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955406 19815337 19816321 - 102011624 AGCD01006092 MODEL 9050042 pseudo LOC102024539 small acidic protein pseudogene NW_004955464 4195653 4196232 + 102024539 AGCD01049986 MODEL 9003116 pseudo LOC102016195 heterogeneous nuclear ribonucleoprotein C pseudogene NW_004955532 2895443 2896483 + 102016195 AGCD01070258 MODEL 8958064 ncrna LOC102015415 uncharacterized LOC102015415 NW_004955496 5673676 5679010 + 102015415 AGCD01062356;GBDI01253638;XR_264177 MODEL 39134369 misc_rna 7SK 7SK RNA 8732875 ncrna LOC102007798 uncharacterized LOC102007798 NW_004955430 5482042 5492358 + 102007798 AGCD01029262;XR_261417 MODEL 9054227 protein-coding LOC102009305 olfactory receptor 1030-like NW_004955511 1711783 1712721 + 102009305 AGCD01066377;XM_005407973 XP_005408030 MODEL 39132058 rrna 5S_rRNA 5S ribosomal RNA 8724762 protein-coding Ddx5 DEAD-box helicase 5 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); androgen receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); endometriosis (ortholog); skin squamous cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955478 7367049 7375043 + 102012756 AGCD01055958;AGCD01055959;GBDF01007791;XM_013503173 XP_013358627 MODEL 8799087 protein-coding LOC102011197 vomeronasal type-1 receptor 90-like NW_004955414 14915467 14916408 - 102011197 AGCD01015162;XM_005380438 XP_005380495 MODEL 10072535 protein-coding LOC106149962 small nuclear ribonucleoprotein E-like NW_004955406 14676735 14677931 + 106149962 AGCD01005967;XM_013520922 XP_013376376 MODEL 8899349 ncrna LOC102020684 uncharacterized LOC102020684 NW_004955423 24373585 24432499 + 102020684 AGCD01024036;GBDF01085899;XR_001234038;XR_001234039;XR_001234040 MODEL 9015132 protein-coding Csta cystatin A ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); keratinocyte differentiation (ortholog); negative regulation of proteolysis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); eosinophilic chronic rhinosinusitis (ortholog); genetic disease (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955427 21617099 21630712 + 102009201 AGCD01027452;GBDI01078018;XM_005386507 XP_005386564 MODEL 8873619 pseudo LOC102008537 60S ribosomal protein L39 pseudogene NW_004955420 7015115 7015474 - 102008537 AGCD01020693;XM_005383030 MODEL 8815124 protein-coding LOC102014309 olfactory receptor 2L8-like NW_004955619 120634 121572 - 102014309 AGCD01077341;XM_013510150 XP_013365604 MODEL 8996687 ncrna LOC102021071 uncharacterized LOC102021071 NW_004955403 17031181 17056708 + 102021071 AGCD01002070;GBBH01058565;XR_001233332;XR_259180 MODEL 8912779 protein-coding Grhl2 grainyhead like transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anterior neural tube closure (ortholog); bicellular tight junction assembly (ortholog); brain development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 28 (ortholog); corneal dystrophy (ortholog); ECTODERMAL DYSPLASIA/SHORT STATURE SYNDROME (ortholog); FOUND IN cell-cell junction (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 26401337 26533297 + 102010583 AGCD01018509;AGCD01018510;AGCD01018511;AGCD01018512;AGCD01018513;AGCD01018514;GBCE01152436;XM_005381919;XM_005381920;XM_005381921 XP_005381976;XP_005381977;XP_005381978 MODEL 8713342 ncrna LOC102012041 uncharacterized LOC102012041 NW_004955402 6962055 6984367 - 102012041 AGCD01000163;GBDF01177670;XR_001235410;XR_001235416;XR_001235420;XR_001235423;XR_259036 MODEL 8789782 protein-coding LOC102008188 core histone macro-H2A.1 ENCODES a protein that exhibits ADP-D-ribose binding (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA repair (ortholog); dosage compensation by inactivation of X chromosome (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); myelodysplastic syndrome (ortholog); FOUND IN Barr body (ortholog); chromatin (ortholog); condensed chromosome (ortholog) NW_004955408 30497531 30550095 - 102008188 AGCD01008809;AGCD01008810;GBBH01000865;GBDK01090820;XM_005376471 XP_005376528 MODEL 8918624 protein-coding Drg2 developmentally regulated GTP binding protein 2 ENCODES a protein that exhibits GTPase activity (ortholog); RNA binding (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955478 11193245 11210917 - 102023259 AGCD01056162;AGCD01056163;GBDI01116153;XM_005402288;XR_001230865 XP_005402345 MODEL 9031246 ncrna LOC102015815 uncharacterized LOC102015815 NW_004955410 30475748 30514297 + 102015815 AGCD01011308;GBBH01177252;XR_001232752;XR_259892 MODEL 8729018 pseudo LOC102014703 mitochondrial import inner membrane translocase subunit TIM14 pseudogene NW_004955521 2433638 2434121 + 102014703 AGCD01068206 MODEL 8782045 protein-coding Dapl1 death associated protein like 1 INVOLVED IN cell population proliferation (ortholog); gene expression (ortholog); negative regulation of CD8-positive, alpha-beta T cell activation (ortholog); FOUND IN nucleus (ortholog) NW_004955449 14696413 14716520 - 102008480 AGCD01042172;GBDI01295898;XM_005393382 XP_005393439 MODEL 8981727 protein-coding LOC102013941 zinc finger protein 717-like NW_004955422 24138776 24154323 - 102013941 AGCD01023215;GBDF01303385;XM_005384707;XM_005384708 XP_005384764;XP_005384765 MODEL 8794256 protein-coding Eif2d eukaryotic translation initiation factor 2D ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955406 42163508 42181482 - 102020307 AGCD01006697;GBDK01278150;XM_005375397;XM_013523095 XP_005375454;XP_013378549 MODEL 9033918 pseudo LOC102013218 spindle and kinetochore-associated protein 2-like NW_004955440 2553852 2554722 + 102013218 AGCD01036210 MODEL 8992323 protein-coding CUNH1orf167 chromosome unknown C1orf167 homolog ASSOCIATED WITH coronary artery disease (ortholog); stroke (ortholog) NW_004955486 2112698 2131296 - 102006464 AGCD01058988;GBDF01003491;XM_005403989;XM_013504259;XM_013504260 XP_005404046;XP_013359713;XP_013359714 MODEL 9044466 pseudo LOC102013597 prefoldin subunit 4 pseudogene NW_004955471 2445173 2445577 - 102013597 AGCD01053009 MODEL 39134062 misc_rna 7SK 7SK RNA 8948804 pseudo LOC102016196 ras GTPase-activating protein-binding protein 1 pseudogene NW_004955437 18354771 18356910 - 102016196 AGCD01034790;XR_261892 MODEL 8704459 ncrna LOC102015418 uncharacterized LOC102015418 NW_004955424 21476497 21490967 + 102015418 AGCD01024898;GBDF01074469;XR_001234201;XR_261092 MODEL 9049342 protein-coding LOC102021829 HLA class I histocompatibility antigen, B-18 alpha chain-like NW_004955712 7998 9513 - 102021829 AGCD01078145;XM_013510181 XP_013365635 MODEL 8884576 protein-coding A1cf APOBEC1 complementation factor ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA binding (ortholog); INVOLVED IN cytidine to uridine editing (ortholog); embryo implantation (ortholog); mRNA localization resulting in post-transcriptional regulation of gene expression (ortholog); ASSOCIATED WITH gout (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); heterochromatin (ortholog) NW_004955425 5992538 6077769 - 102003986 AGCD01025363;AGCD01025364;AGCD01025365;GBCQ01093432;XM_005385900;XM_005385901;XM_013514917 XP_005385957;XP_005385958;XP_013370371 MODEL 8994900 ncrna LOC102008932 uncharacterized LOC102008932 NW_004955468 2457664 2458509 + 102008932 AGCD01051818;GBDK01424972;XR_263377 MODEL 8866003 protein-coding Hspa6 heat shock protein family A (Hsp70) member 6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular heat acclimation (ortholog); cellular response to heat (ortholog); protein refolding (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN centriole (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955462 14723990 14726420 - 102021948 AGCD01049456;GBDF01177875;XM_005398308 XP_005398365 MODEL 10110829 protein-coding LOC106149963 translation initiation factor IF-2-like NW_004955458 11162068 11162601 - 106149963 AGCD01047726;GBDF01170947;GBDI01387074;XM_013520921 XP_013376375 MODEL 8835305 protein-coding LOC102009725 sperm motility kinase Z-like NW_004955421 18237422 18307124 + 102009725 AGCD01022039;AGCD01022040;AGCD01022041;AGCD01022042;GBBH01067465;XM_005383799;XM_005383800;XM_013513643;XR_001233830 XP_005383856;XP_005383857;XP_013369097 MODEL 8830025 ncrna LOC102017696 uncharacterized LOC102017696 NW_004955435 17195753 17201846 - 102017696 AGCD01033350;GBDF01052175;XR_001234878;XR_261720 MODEL 9025217 protein-coding Ero1a endoplasmic reticulum oxidoreductase 1 alpha ENCODES a protein that exhibits oxidoreductase activity (ortholog); protein-disulfide reductase activity (ortholog); thiol oxidase activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell redox homeostasis (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955409 10495892 10533383 + 102009917 AGCD01009474;AGCD01009475;GBCE01145796;XM_005376780 XP_005376837 MODEL 8799438 pseudo LOC102024540 sodium/potassium-transporting ATPase subunit beta-3 pseudogene NW_004955411 34920604 34921576 + 102024540 AGCD01012417 MODEL 39134370 misc_rna 7SK 7SK RNA 39131380 protein-coding IFT80 intraflagellar transport 80 8982276 ncrna LOC102005668 uncharacterized LOC102005668 NW_004955408 4130103 4136421 + 102005668 AGCD01008089;GBDF01241145;XR_259658 MODEL 8767910 ncrna LOC102019303 uncharacterized LOC102019303 NW_004955513 1028739 1031639 - 102019303 AGCD01066838;GBCB01080479;XR_001231742 MODEL 8868979 pseudo LOC102016570 claudin-10 pseudogene NW_004955409 29927961 29929012 - 102016570 AGCD01010283 MODEL 8942238 protein-coding Fcho2 FCH and mu domain containing endocytic adaptor 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); plasma membrane (ortholog) NW_004955425 27506645 27632983 - 102009199 AGCD01025973;AGCD01025974;AGCD01025975;AGCD01025976;AGCD01025977;AGCD01025978;GBDK01127201;XM_005386078 XP_005386135 MODEL 8990248 pseudo LOC102020323 homeobox protein PKNOX1 pseudogene NW_004955468 3756234 3757363 + 102020323 AGCD01051868 MODEL 8974382 protein-coding Kcnk9 potassium two pore domain channel subfamily K member 9 ENCODES a protein that exhibits identical protein binding (ortholog); outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); negative regulation of aldosterone secretion (ortholog); potassium ion import across plasma membrane (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Birk-Barel syndrome (ortholog); childhood absence epilepsy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); plasma membrane (ortholog); synaptic vesicle (ortholog) NW_004955461 13406969 13476720 - 102022172 AGCD01049037;AGCD01049038;AGCD01049039;GBDF01285685;XM_005398049 XP_005398106 MODEL 39131855 rrna 5S_rRNA 5S ribosomal RNA 8807082 protein-coding Ddx50 DExD-box helicase 50 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleolus (ortholog) NW_004955437 22086704 22118177 - 102028015 AGCD01034929;GBDJ01076042;XM_005390102 XP_005390159 MODEL 8919973 protein-coding LOC102021830 keratin-associated protein 3-1 NW_004955451 15429424 15430011 - 102021830 AGCD01043607;XM_005394380 XP_005394437 MODEL 8987388 protein-coding Jam3 junctional adhesion molecule 3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN adaptive immune response (ortholog); adherens junction assembly (ortholog); angiogenesis (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autism spectrum disorder (ortholog); Carcinoma, Lewis Lung (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell contact zone (ortholog); cell-cell junction (ortholog) NW_004955412 34901850 34967394 + 102028517 AGCD01013395;AGCD01013396;GBBH01165678;XM_005378586;XM_005378587;XM_013511148 XP_005378643;XP_005378644;XP_013366602 MODEL 8789252 protein-coding LOC102010431 olfactory receptor 13H1-like NW_004955580 1266092 1267030 - 102010431 AGCD01075652;XM_005414225 XP_005414282 MODEL 8822666 ncrna LOC102014310 uncharacterized LOC102014310 NW_004955403 28413799 28421702 + 102014310 AGCD01002337;GBDF01100364;XR_001233585;XR_259212 MODEL 8747976 protein-coding Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ENCODES a protein that exhibits ADP phosphatase activity (ortholog); CDP phosphatase activity (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN 'de novo' post-translational protein folding (ortholog); protein N-linked glycosylation (ortholog); UDP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) NW_004955523 1407812 1441829 + 102022732 AGCD01068517;AGCD01068518;AGCD01068519;GBDF01052180;XM_013507129;XM_013507130;XM_013507131;XM_013507132;XM_013507133;XM_013507134;XM_013507135;XM_013507136;XM_013507137 XP_013362583;XP_013362584;XP_013362585;XP_013362586;XP_013362587;XP_013362588;XP_013362589;XP_013362590;XP_013362591 MODEL 8729461 protein-coding LOC102008935 tripartite motif-containing protein 5-like NW_004955414 21565273 21579442 - 102008935 AGCD01015423;GBDI01215630;XM_013512005;XM_013512006 XP_013367459;XP_013367460 MODEL 9009220 protein-coding Grhl3 grainyhead like transcription factor 3 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN central nervous system development (ortholog); cochlea morphogenesis (ortholog); ectoderm development (ortholog); ASSOCIATED WITH cleft palate (ortholog); Fetal Death (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 4125792 4159699 + 102027376 AGCD01043963;GBDI01107923;XM_005394800;XM_013519744 XP_005394857;XP_013375198 MODEL 8737297 protein-coding LOC102012822 sulfotransferase family cytosolic 2B member 1-like NW_004955804 1914 12609 + 102012822 AGCD01078378;AGCD01078379;GBCE01003625;XM_005415116 XP_005415173 MODEL 8945778 ncrna LOC102014705 uncharacterized LOC102014705 NW_004955434 17127457 17173227 - 102014705 AGCD01032534;GBDF01190609;XR_261622;XR_261623 MODEL 9000164 ncrna LOC102013598 uncharacterized LOC102013598 NW_004955414 27677164 27679030 - 102013598 AGCD01015664;XR_260199 MODEL 8811601 protein-coding Dapp1 dual adaptor of phosphotyrosine and 3-phosphoinositides 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); osteoarthritis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955496 7813540 7855754 - 102022941 AGCD01062385;GBDJ01094345;XM_005406268;XM_013505383 XP_005406325;XP_013360837 MODEL 39134063 misc_rna 7SK 7SK RNA 8733887 protein-coding CUNH1orf174 chromosome unknown C1orf174 homolog ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955486 7821396 7834357 + 102020919 AGCD01059136;AGCD01059137;AGCD01059138;GBDF01208076;XM_005404125 XP_005404182 MODEL 8938419 protein-coding LOC102020686 olfactory receptor 18-like NW_004955495 371183 377463 + 102020686 AGCD01061625;XM_013505042 XP_013360496 MODEL 8736224 protein-coding Acat1 acetyl-CoA acetyltransferase 1 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); C-acetyltransferase activity (ortholog); cholesterol O-acyltransferase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA catabolic process (ortholog); adipose tissue development (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; ASSOCIATED WITH arteriosclerosis (ortholog); beta-ketothiolase deficiency (ortholog); carbohydrate metabolic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955412 10350088 10369806 + 102004581 AGCD01012766;AGCD01012767;GBCB01044709;XM_005378034 XP_005378091 MODEL 8889531 protein-coding Ift80 intraflagellar transport 80 INVOLVED IN apoptotic process (ortholog); articular cartilage development (ortholog); bone development (ortholog); ASSOCIATED WITH Asphyxia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 2 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955448 10808940 10819655 - 102003296 AGCD01041503;GBCB01121051;XM_013518599 XP_013374053 MODEL 8864864 pseudo LOC102011627 glyceraldehyde-3-phosphate dehydrogenase pseudogene NW_004955456 12484506 12486673 - 102011627 AGCD01046567 MODEL 8699639 protein-coding LOC102008539 sodium- and chloride-dependent transporter XTRP3A-like NW_004955420 26201378 26228005 + 102008539 AGCD01021392;AGCD01021393;AGCD01021394;AGCD01021395;GBCQ01102604;XM_013513346 XP_013368800 MODEL 8934007 protein-coding Fchsd1 FCH and double SH3 domains 1 INVOLVED IN apoptotic process (ortholog); gene expression (ortholog); import into nucleus (ortholog); FOUND IN cuticular plate (ortholog); cytosol (ortholog); protein-containing complex (ortholog) NW_004955415 12123520 12135412 + 102006572 AGCD01016185;GBDF01114965;XM_005380728;XM_005380729 XP_005380785;XP_005380786 MODEL 9044425 pseudo LOC102012045 chromobox protein homolog 3 pseudogene NW_004955402 54299108 54299688 - 102012045 AGCD01001394 MODEL 8769032 ncrna LOC102015819 uncharacterized LOC102015819 NW_004955464 906749 927812 + 102015819 AGCD01049942;GBDF01099433;XR_263186 MODEL 39132061 rrna 5S_rRNA 5S ribosomal RNA 8946519 protein-coding Cip2a cellular inhibitor of PP2A ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN broken chromosome clustering (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955427 9448102 9480729 - 102017796 AGCD01027101;GBDF01047827;XM_005386362;XM_013515128 XP_005386419;XP_013370582 MODEL 8777212 pseudo LOC102021831 bromodomain-containing protein 7-like NW_004955403 338651 341525 + 102021831 AGCD01001689 MODEL 8801529 protein-coding Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ENCODES a protein that exhibits actin binding (ortholog); calcium-activated potassium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN adult walking behavior (ortholog); blood vessel diameter maintenance (ortholog); cell maturation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); cytoplasm (ortholog) NW_004955437 14749808 15457274 + 102023523 AGCD01034679;AGCD01034680;AGCD01034681;AGCD01034682;AGCD01034683;AGCD01034684;AGCD01034685;AGCD01034686;AGCD01034687;AGCD01034688;AGCD01034689;GBBH01047842;GBCB01074602;XM_005389908;XM_013517024 XP_005389965;XP_013372478 MODEL 8771752 protein-coding LOC102009306 olfactory receptor 10AG1-like NW_004955511 845267 846223 - 102009306 AGCD01066345;XM_005408213 XP_005408270 MODEL 8963522 protein-coding Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ENCODES a protein that exhibits cap-dependent translation initiation factor activity (ortholog); IRES-mediated translation initiation factor activity (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to heat (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955466 2838785 2855443 - 102016902 AGCD01050768;AGCD01050769;GBCB01021958;XM_005399085;XM_005399086;XM_005399087;XM_013521972 XP_005399142;XP_005399143;XP_005399144;XP_013377426 MODEL 8737996 ncrna LOC102007799 uncharacterized LOC102007799 NW_004955431 12189719 12210492 + 102007799 AGCD01030254;GBDF01124095;XR_261466;XR_261467 MODEL 8830541 ncrna LOC102005676 uncharacterized LOC102005676 NW_004955460 10833953 10838057 + 102005676 AGCD01048618;AGCD01048619;GBDI01033534;XR_263054 MODEL 8918437 protein-coding Dip2b disco interacting protein 2 homolog B ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); positive regulation of peptidyl-lysine acetylation (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder type FRA12A (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955547 1012320 1240749 + 102017164 AGCD01072201;AGCD01072202;AGCD01072203;AGCD01072204;GBBH01076687;GBDF01215294;XM_013508452;XM_013508453;XM_013508454 XP_013363906;XP_013363907;XP_013363908 MODEL 8744946 ncrna LOC102016201 uncharacterized LOC102016201 NW_004955441 13879512 13884570 - 102016201 AGCD01037163;GBCB01091731;XR_262077 MODEL 9042402 protein-coding Ildr1 immunoglobulin like domain containing receptor 1 ENCODES a protein that exhibits high-density lipoprotein particle receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); epithelial structure maintenance (ortholog); positive regulation of peptide hormone secretion (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 42 (ortholog); Deafness (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955427 21304460 21333170 - 102007792 AGCD01027440;GBCQ01175397;XM_005386503;XM_013515104;XM_013515105;XM_013515106;XM_013515107;XM_013515108;XM_013515109 XP_005386560;XP_013370558;XP_013370559;XP_013370560;XP_013370561;XP_013370562;XP_013370563 MODEL 8979984 protein-coding LOC102015419 spermatogenesis-associated protein 7 homolog NW_004955498 671164 805118 + 102015419 AGCD01062724;AGCD01062725;AGCD01062726;AGCD01062727;AGCD01062728;AGCD01062729;XM_013505520 XP_013360974 MODEL 39134064 misc_rna 7SK 7SK RNA 8866341 protein-coding LOC102008192 60S ribosomal protein L37a-like NW_004955458 10729549 10729854 - 102008192 AGCD01047704;XM_005397532 XP_005397589 MODEL 39131857 rrna 5S_rRNA 5S ribosomal RNA 8818937 protein-coding Hspa8 heat shock protein family A (Hsp70) member 8 ENCODES a protein that exhibits A1 adenosine receptor binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); axo-dendritic transport (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN androgen signaling pathway; chaperone mediated autophagy pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN asymmetric synapse (ortholog); autophagosome (ortholog); axon (ortholog) NW_004955412 23863513 23867984 - 102021223 AGCD01013100;GBCQ01005649;XM_005378379 XP_005378436 MODEL 8763673 pseudo LOC102013943 ubiquitin-protein ligase E3A-like NW_004955422 14030769 14050042 - 102013943 AGCD01022846;AGCD01022847;XR_260935 MODEL 8731080 protein-coding Acat2 acetyl-CoA acetyltransferase 2 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to nutrient (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH arteriosclerosis (ortholog); coronary artery disease (ortholog); Cytosolic Acetoacetyl-CoA Thiolase Deficiency (ortholog); FOUND IN cytoplasm (ortholog) NW_004955439 21123886 21142562 - 102017388 AGCD01036140;AGCD01036141;GBDF01081090;XM_005390719 XP_005390776 MODEL 8752348 ncrna LOC102010432 uncharacterized LOC102010432 NW_004955449 7929705 7955196 - 102010432 AGCD01042005;XR_262495 MODEL 8933673 protein-coding LOC102017700 olfactory receptor 2D2-like NW_004955537 2595360 2596310 + 102017700 AGCD01070931;XM_005410720 XP_005410777 MODEL 8947356 protein-coding LOC102003850 putative vomeronasal receptor-like protein 4 NW_004955465 12732451 12749417 - 102003850 AGCD01050556;AGCD01050557;AGCD01050558;GBDF01114303;XM_005398941;XM_013521802;XM_013521803;XM_013521804;XM_013521805 XP_005398998;XP_013377256;XP_013377257;XP_013377258;XP_013377259 MODEL 8842458 pseudo LOC102011628 26S proteasome non-ATPase regulatory subunit 14-like NW_004955457 7388758 7389844 + 102011628 AGCD01046877 MODEL 8761524 protein-coding Jaml junction adhesion molecule like ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN gamma-delta T cell activation (ortholog); heterophilic cell-cell adhesion (ortholog); monocyte extravasation (ortholog); FOUND IN bicellular tight junction (ortholog); plasma membrane (ortholog) NW_004955412 19363501 19402213 - 102018484 AGCD01012951;GBBH01026535;XM_013511155;XM_013511156;XM_013511157;XM_013511158;XM_013511159 XP_013366609;XP_013366610;XP_013366611;XP_013366612;XP_013366613 MODEL 8968408 protein-coding Ero1b endoplasmic reticulum oxidoreductase 1 beta ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); protein-disulfide reductase activity (ortholog); thiol oxidase activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); extracellular matrix organization (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH cataract (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); membrane (ortholog) NW_004955492 3845406 3911671 + 102021987 AGCD01060701;AGCD01060702;AGCD01060703;AGCD01060704;AGCD01060705;GBBH01198228;GBDF01009565;XM_013504712 XP_013360166 MODEL 9044392 protein-coding LOC102011198 signal-regulatory protein beta-1 NW_004955415 12897443 12955738 - 102011198 AGCD01016236;AGCD01016237;GBCE01043667;XM_013512246;XM_013512247;XM_013512248 XP_013367700;XP_013367701;XP_013367702 MODEL 8705121 protein-coding LOC102012823 inositol-3-phosphate synthase 1-like NW_004958180 30 610 + 102012823 AGCD01081576;GBBH01061916;XM_005415238 XP_005415295 MODEL 8886265 protein-coding Cstb cystatin B ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amyloid fibril formation (ortholog); negative regulation of proteolysis (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); Dyskinesias (ortholog); dystonia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955407 41475533 41478943 + 102004782 AGCD01007869;GBCE01002074;GBDK01013945;XM_005375884 XP_005375941 MODEL 8841549 protein-coding LOC102014707 uncharacterized LOC102014707 NW_004955524 3789726 3834763 - 102014707 AGCD01068929;AGCD01068930;AGCD01068931;GBBH01025912;XM_013507201 XP_013362655 MODEL 8805875 protein-coding LOC102019312 zinc finger protein 627-like NW_004955524 331603 343440 - 102019312 AGCD01068675;GBDI01011137;XM_005409479 XP_005409536 MODEL 8903064 protein-coding Fchsd2 FCH and double SH3 domains 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); membrane organization (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN clathrin-coated pit (ortholog); plasma membrane (ortholog); stereocilium shaft (ortholog) NW_004955414 18343832 18597675 + 102019494 AGCD01015276;AGCD01015277;AGCD01015278;AGCD01015279;AGCD01015280;AGCD01015281;AGCD01015282;AGCD01015283;AGCD01015284;AGCD01015285;GBDF01248886;XM_005379965 XP_005380022 MODEL 8768017 ncrna LOC102021073 uncharacterized LOC102021073 NW_004955883 101 6586 - 102021073 AGCD01078572;AGCD01078573;AGCD01078574;GBDJ01114613;XR_001232602;XR_001232603 MODEL 8908324 protein-coding Cipc CLOCK interacting pacemaker INVOLVED IN negative regulation of circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 1016721 1036379 + 102007938 AGCD01034970;GBDF01042048;XM_005390168;XM_005390169;XM_005390170;XM_005390171;XM_005390172;XM_005390175;XM_005390176;XM_005390177;XM_005390178;XM_013517172;XM_013517173 XP_005390225;XP_005390226;XP_005390227;XP_005390228;XP_005390229;XP_005390232;XP_005390233;XP_005390234;XP_005390235;XP_013372626;XP_013372627 MODEL 8930387 protein-coding Btla B and T lymphocyte associated ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); immune response-regulating cell surface receptor signaling pathway (ortholog); negative regulation of alpha-beta T cell proliferation (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955427 12804467 12837178 - 102026657 AGCD01027226;AGCD01027227;GBDI01324577;XM_005386387 XP_005386444 MODEL 8800445 protein-coding A3galt2 alpha 1,3-galactosyltransferase 2 ENCODES a protein that exhibits alpha-1,3-galactosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetyllactosaminide 3-alpha-galactosyltransferase activity (ortholog); INVOLVED IN cellular response to manganese ion (ortholog); glycosphingolipid biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog); vesicle (ortholog) NW_004955452 11476485 11489243 - 102007501 AGCD01044337;GBDJ01003070;XM_005395110;XM_013519536;XM_013519537 XP_005395167;XP_013374990;XP_013374991 MODEL 10243474 ncrna LOC106149964 uncharacterized LOC106149964 NW_004955402 8012332 8032846 + 106149964 AGCD01000189;GBDF01059519;XR_001236462 MODEL 8963310 protein-coding Dars1 aspartyl-tRNA synthetase 1 ENCODES a protein that exhibits aspartate-tRNA ligase activity (ortholog); INVOLVED IN aspartyl-tRNA aminoacylation (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH genetic disease (ortholog); Hypomyelination with Brainstem and Spinal Cord Involvement and Leg Spasticity (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955440 3268648 3345808 - 102010837 AGCD01036240;GBBH01117599;XM_013517491 XP_013372945 MODEL 9058100 ncrna LOC102020324 uncharacterized LOC102020324 NW_004955469 5243140 5244995 - 102020324 AGCD01052346;GBDF01148382;XR_263432 MODEL 9028012 protein-coding CUNH1orf185 chromosome unknown C1orf185 homolog ASSOCIATED WITH atrial fibrillation (ortholog) NW_004955464 7858273 7894407 - 102026616 AGCD01050071;GBDK01325480;XM_013521763 XP_013377217 MODEL 8805961 protein-coding Ddx51 DEAD-box helicase 51 ASSOCIATED WITH malignant mesothelioma (ortholog) NW_004955482 632030 636959 + 102022601 AGCD01057179;AGCD01057180;GBCB01077100;GBDF01052846;XM_013503597 XP_013359051 MODEL 8955767 pseudo LOC102014326 olfactory receptor 6C3-like NW_004955458 2606990 2607925 - 102014326 AGCD01047239 MODEL 8905108 protein-coding LOC102013220 olfactory receptor 4N5 NW_004955550 102932 103858 - 102013220 AGCD01072481;XM_005412027 XP_005412084 MODEL 9048668 pseudo LOC102015420 pescadillo homolog pseudogene NW_004955424 12835886 12840197 - 102015420 AGCD01024620 MODEL 8953539 protein-coding Ankrd50 ankyrin repeat domain containing 50 INVOLVED IN endocytic recycling (ortholog) NW_004955428 16360602 16397829 + 102009636 AGCD01028021;GBDK01192159;XM_005386751 XP_005386808 MODEL 8880558 protein-coding LOC102008193 uncharacterized LOC102008193 NW_004955409 10334641 10336946 - 102008193 AGCD01009464;GBDK01043622;XM_005376774;XM_005376775 XP_005376831;XP_005376832 MODEL 39134371 misc_rna 7SK 7SK RNA 8791210 protein-coding LOC102016571 cytochrome P450 2W1 ENCODES a protein that exhibits all-trans retinal binding (ortholog); all-trans-retinol binding (ortholog); retinoic acid 4-hydroxylase activity (ortholog); INVOLVED IN aflatoxin metabolic process (ortholog); phospholipid metabolic process (ortholog); retinoic acid catabolic process (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955460 8705068 8711266 + 102016571 AGCD01048531;GBDI01051075;XM_013521223 XP_013376677 MODEL 8769122 protein-coding Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN cellular response to bile acid (ortholog); cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Diastolic Hypertension, Resistance to (ortholog); Experimental Diabetes Mellitus (ortholog); hypertension (ortholog); FOUND IN membrane (ortholog); neuronal cell body (ortholog); somatodendritic compartment (ortholog) NW_004955408 23306286 23335170 - 102017956 AGCD01008588;GBDJ01089926;XM_005376319;XM_005376320;XM_013509223;XM_013509231 XP_005376376;XP_005376377;XP_013364677;XP_013364685 MODEL 8886556 protein-coding Drgx dorsal root ganglia homeobox ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); detection of chemical stimulus (ortholog) NW_004955556 842714 870248 + 102016757 AGCD01073179;XM_013508784 XP_013364238 MODEL 8779419 protein-coding LOC102020687 apomucin-like NW_004955500 582 31342 + 102020687 AGCD01063628;AGCD01063629;GBBH01061730;XM_005406705 XP_005406762 MODEL 9006878 protein-coding Erp27 endoplasmic reticulum protein 27 NW_004955413 11650920 11670127 - 102004050 AGCD01013966;GBCE01143801;XM_005379014;XM_013511584;XM_013511585 XP_005379071;XP_013367038;XP_013367039 MODEL 8737186 ncrna LOC102007802 uncharacterized LOC102007802 NW_004955433 6683298 6685871 - 102007802 AGCD01031546;GBDF01076212;XR_261563 MODEL 8955232 ncrna LOC102009731 uncharacterized LOC102009731 NW_004955495 6647375 6652586 + 102009731 AGCD01062086;GBDK01350689;XR_264167 MODEL 8810772 protein-coding Ift81 intraflagellar transport 81 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary transport involved in cilium assembly (ortholog); regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); ciliopathy (ortholog); Dwarfism (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955482 7114639 7182378 + 102020121 AGCD01057438;AGCD01057439;AGCD01057440;AGCD01057441;AGCD01057442;AGCD01057443;GBDF01125793;XM_005403140;XM_013503735 XP_005403197;XP_013359189 MODEL 39134065 misc_rna 7SK 7SK RNA 9059997 protein-coding Cirbp cold inducible RNA binding protein ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); poly(U) RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to cold (ortholog); mRNA stabilization (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH Alcohol-Induced Disorders, Nervous System (ortholog); autism spectrum disorder (ortholog); Hypothermia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleoplasm (ortholog) NW_004955495 6634389 6640800 - 102008008 AGCD01062086;GBDF01003750;XM_005405981;XM_005405982;XM_005405984;XM_005405985;XM_013505298 XP_005406038;XP_005406039;XP_005406041;XP_005406042;XP_013360752 MODEL 9021298 ncrna LOC102012046 uncharacterized LOC102012046 NW_004955403 2740603 2756599 + 102012046 AGCD01001738;GBDF01080335;XR_259139 MODEL 8836491 protein-coding LOC102024541 uncharacterized LOC102024541 NW_004955466 10751416 10758838 + 102024541 AGCD01051074;GBDF01119345;XM_005399200;XM_013521874;XR_001236768 XP_005399257;XP_013377328 MODEL 8749983 protein-coding Hspa9 heat shock protein family A (Hsp70) member 9 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); enzyme binding (ortholog); fibroblast growth factor binding (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); cellular response to interleukin-1 (ortholog); erythrocyte differentiation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; presequence pathway of mitochondrial protein import; ASSOCIATED WITH Alzheimer's disease (ortholog); autoimmune disease (ortholog); autosomal dominant sideroblastic anemia 4 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955418 1915985 1931017 + 102025464 AGCD01018735;GBDF01048780;XM_005382096 XP_005382153 MODEL 8868683 protein-coding Dars2 aspartyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits aspartate-tRNA ligase activity (ortholog); aspartate-tRNA(Asn) ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial asparaginyl-tRNA aminoacylation (ortholog); tRNA aminoacylation (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); Charcot-Marie-Tooth disease, axonal, type 2LL (ortholog); clubfoot (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955406 13964087 13991691 + 102008592 AGCD01005956;GBCE01165299;XM_005374874 XP_005374931 MODEL 8726639 protein-coding Grhpr glyoxylate and hydroxypyruvate reductase ENCODES a protein that exhibits carboxylic acid binding (ortholog); glyoxylate reductase (NADPH) activity (ortholog); hydroxypyruvate reductase (NADH) activity (ortholog); INVOLVED IN dicarboxylic acid metabolic process (ortholog); glyoxylate metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); familial hypocalciuric hypercalcemia (ortholog); nephrocalcinosis (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) NW_004955419 29032591 29044046 - 102008319 AGCD01020484;GBDI01225270;XM_005382885 XP_005382942 MODEL 8796262 pseudo LOC102013947 protein-lysine N-methyltransferase Mettl10 pseudogene NW_004955424 28152797 28154395 + 102013947 AGCD01025147 MODEL 8845758 protein-coding LOC102011631 solute carrier family 40 member 1-like NW_004955410 25194888 25237636 - 102011631 AGCD01011145;GBDK01125549;XM_013510582 XP_013366036 MODEL 8716793 protein-coding LOC102014327 uncharacterized LOC102014327 NW_004955408 3419831 3442678 - 102014327 AGCD01008056;GBDF01039360;XM_005376570 XP_005376627 MODEL 9035886 protein-coding LOC102003851 olfactory receptor 150-like NW_004955412 24925251 24928447 + 102003851 AGCD01013131;XM_005378411 XP_005378468 MODEL 8736996 protein-coding Eif2s2 eukaryotic translation initiation factor 2 subunit beta ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); in utero embryonic development (ortholog); male germ cell proliferation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); nucleus (ortholog) NW_004955422 27245381 27263342 + 102025372 AGCD01023317;GBDF01006023;XM_005384835 XP_005384892 MODEL 8752224 ncrna LOC102005678 uncharacterized LOC102005678 NW_004955461 3800451 3869319 - 102005678 AGCD01048855;GBDF01224739;XR_001236555;XR_263076;XR_263077 MODEL 8764256 pseudo LOC102008936 glycoprotein endo-alpha-1,2-mannosidase pseudogene NW_004955414 9246135 9247353 + 102008936 AGCD01015014 MODEL 8945699 protein-coding Entpd6 ectonucleoside triphosphate diphosphohydrolase 6 ENCODES a protein that exhibits CDP phosphatase activity (ortholog); GDP phosphatase activity (ortholog); guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity (ortholog); INVOLVED IN response to calcium ion (ortholog); response to magnesium ion (ortholog); ASSOCIATED WITH obesity (ortholog); seminoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955415 31219909 31245107 + 102010479 AGCD01016671;AGCD01016672;GBDK01241622;XM_005380988 XP_005381045 MODEL 8921307 ncrna LOC102008548 uncharacterized LOC102008548 NW_004955423 309053 319789 + 102008548 AGCD01023411;GBDF01260789;XR_260936 MODEL 8700656 ncrna LOC102015821 uncharacterized LOC102015821 NW_004955412 13142327 13160782 + 102015821 AGCD01012829;GBDF01278571;XR_001232884;XR_001232885;XR_001232886;XR_259991 MODEL 8865998 ncrna LOC102021832 uncharacterized LOC102021832 NW_004955404 13372937 13378332 - 102021832 AGCD01003484;GBDF01277117;XR_259308 MODEL 8731791 protein-coding CUNH1orf198 chromosome unknown C1orf198 homolog FOUND IN cytosol (ortholog) NW_004955492 7762534 7774394 + 102025256 AGCD01060803;GBDI01182845;XM_005405022 XP_005405079 MODEL 39132062 rrna 5S_rRNA 5S ribosomal RNA 8963385 protein-coding Btn1a1 butyrophilin subfamily 1 member A1 NW_004955483 392749 409947 - 102012199 AGCD01057609;GBCB01025102;XM_005403280;XM_005403281;XM_005403282;XM_005403283;XM_005403284;XM_013503766 XP_005403337;XP_005403338;XP_005403339;XP_005403340;XP_005403341;XP_013359220 MODEL 8951650 protein-coding Acbd3 acyl-CoA binding domain containing 3 ENCODES a protein that exhibits protein kinase A regulatory subunit binding (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955489 337578 381557 - 102020016 AGCD01059796;AGCD01059797;AGCD01059798;AGCD01059799;GBBH01050351;GBDF01125939;XM_013504481 XP_013359935 MODEL 8787156 protein-coding Cpvl carboxypeptidase vitellogenic like NW_004955410 30546835 30712795 - 102013701 AGCD01011309;AGCD01011310;AGCD01011311;AGCD01011312;AGCD01011313;GBDK01129892;XM_005377476;XM_005377477;XM_005377478;XM_005377479;XM_005377480;XM_005377481;XM_013510616 XP_005377533;XP_005377534;XP_005377535;XP_005377536;XP_005377537;XP_005377538;XP_013366070 MODEL 8896071 protein-coding Jarid2 jumonji and AT-rich interaction domain containing 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); facultative heterochromatin formation (ortholog); gene expression (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN ESC/E(Z) complex (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955590 383810 512854 - 102026273 AGCD01076202;GBDI01264181;XM_005414590;XM_005414591;XM_013509963 XP_005414647;XP_005414648;XP_013365417 MODEL 8971796 pseudo LOC102015423 nuclease-sensitive element-binding protein 1 pseudogene NW_004955427 22766997 22772487 + 102015423 AGCD01027476;XR_261285 MODEL 9060023 pseudo LOC102008195 40S ribosomal protein S14 pseudogene NW_004955409 22320691 22321337 + 102008195 AGCD01010034 MODEL 8762189 protein-coding LOC102012824 cytochrome c oxidase subunit 6B1-like NW_004955452 216986 217314 - 102012824 AGCD01043804;XM_005394661 XP_005394718 MODEL 39134372 misc_rna 7SK 7SK RNA 8765177 pseudo LOC102019317 ubiquitin-like domain-containing CTD phosphatase 1 pseudogene NW_004955435 16026713 16028322 + 102019317 AGCD01033293 MODEL 8903669 protein-coding LOC102021075 beta-defensin 106A-like NW_004955403 53581580 53584377 + 102021075 AGCD01003064;XM_005373912 XP_005373969 MODEL 8898550 protein-coding Fcmr Fc mu receptor ENCODES a protein that exhibits high-affinity IgM receptor activity (ortholog); IgM binding (ortholog); polymeric immunoglobulin binding (ortholog); INVOLVED IN Fc receptor-mediated immune complex endocytosis (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); immunoglobulin transcytosis in epithelial cells (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); early endosome membrane (ortholog); external side of plasma membrane (ortholog) NW_004955406 42438173 42452339 - 102023000 AGCD01006707;AGCD01006708;GBBH01063332;GBDI01007407;XM_013502785 XP_013358239 MODEL 9005493 protein-coding Cstf1 cleavage stimulation factor subunit 1 INVOLVED IN regulation of mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN nucleoplasm (ortholog) NW_004955445 2816986 2830971 - 102010207 AGCD01039368;AGCD01039369;GBDF01005298;XM_005392270;XM_005392271;XM_005392272;XM_005392273;XM_005392274;XM_013518332 XP_005392327;XP_005392328;XP_005392329;XP_005392330;XP_005392331;XP_013373786 MODEL 8798562 protein-coding Dip2c disco interacting protein 2 homolog C INVOLVED IN gene expression (ortholog); ASSOCIATED WITH genetic disease (ortholog); lung small cell carcinoma (ortholog); Neurodevelopmental Disorders (ortholog) NW_004955492 543026 764697 + 102012866 AGCD01060642;AGCD01060643;AGCD01060644;GBDF01249271;XM_013504713;XM_013504714;XM_013504715;XM_013504716 XP_013360167;XP_013360168;XP_013360169;XP_013360170 MODEL 8858369 protein-coding Ildr2 immunoglobulin like domain containing receptor 2 INVOLVED IN cell differentiation (ortholog); homeostasis of number of cells within a tissue (ortholog); insulin secretion (ortholog); FOUND IN tight junction (ortholog) NW_004955462 9953393 10016339 + 102030613 AGCD01049346;AGCD01049347;AGCD01049348;AGCD01049349;AGCD01049350;GBCE01147847;GBDF01303897;XM_013521459 XP_013376913 MODEL 39131858 rrna 5S_rRNA 5S ribosomal RNA 8876489 protein-coding LOC102010434 small proline-rich protein 3-like NW_004955592 374906 377181 - 102010434 AGCD01076311;GBDI01016407;XM_005414613;XM_005414614 XP_005414670;XP_005414671 MODEL 8793304 protein-coding LOC102017702 natural cytotoxicity triggering receptor 2 NW_004955437 7878039 7880780 + 102017702 AGCD01034470;XM_013516719 XP_013372173 MODEL 8728227 protein-coding LOC102008939 probable E3 ubiquitin-protein ligase HERC6 NW_004955474 12079119 12140769 - 102008939 AGCD01054648;AGCD01054649;AGCD01054650;GBDK01319254;XM_013502713 XP_013358167 MODEL 8803489 protein-coding LOC102007803 liver carboxylesterase 1-like NW_004955433 13305854 13329280 - 102007803 AGCD01031684;GBBH01002391;XM_005388326;XM_005388327 XP_005388383;XP_005388384 MODEL 8845720 protein-coding Ift88 intraflagellar transport 88 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); brain development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); autosomal recessive polycystic kidney disease (ortholog); basal cell carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); axonemal basal plate (ortholog); axoneme (ortholog) NW_004955497 1338959 1454788 + 102011216 AGCD01062457;AGCD01062458;AGCD01062459;AGCD01062460;GBCE01023354;XM_005406308;XM_005406309;XM_005406310;XM_013505482;XM_013505483;XM_013505484;XM_013505486;XR_264192 XP_005406365;XP_005406366;XP_005406367;XP_013360936;XP_013360937;XP_013360938;XP_013360940 MODEL 8953689 pseudo LOC102011201 40S ribosomal protein S27-like pseudogene NW_004955477 3377398 3380933 - 102011201 AGCD01055553 MODEL 8797740 protein-coding LOC102014712 olfactory receptor 6C74-like NW_004955546 2382165 2384732 + 102014712 AGCD01072089;GBDF01123636;XM_013508368 XP_013363822 MODEL 8806010 protein-coding CUNH1orf210 chromosome unknown C1orf210 homolog ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955537 2876176 2892379 - 102022959 AGCD01070939;GBDK01283088;XM_005410640;XM_005410641;XM_005410642;XM_005410643;XM_005410644;XM_013507814 XP_005410697;XP_005410698;XP_005410699;XP_005410700;XP_005410701;XP_013363268 MODEL 8868938 ncrna LOC102013950 uncharacterized LOC102013950 NW_004955426 6661147 6672152 + 102013950 AGCD01026162;AGCD01026163;GBDF01123929;XR_261194 MODEL 8814501 protein-coding Hspb1 heat shock protein family B (small) member 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein folding chaperone (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to butyrate (ortholog); cellular response to hydrogen peroxide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); FOUND IN axon (ortholog); cardiac myofibril (ortholog); contractile muscle fiber (ortholog) NW_004955844 8094 9565 + 102017834 AGCD01078476;GBBH01001226;XM_005415130 XP_005415187 MODEL 8739192 protein-coding LOC102024543 high affinity immunoglobulin gamma Fc receptor I-like NW_004955413 924533 950278 - 102024543 AGCD01013495;AGCD01013496;AGCD01013497;AGCD01013498;GBDK01121288;XM_005378716 XP_005378773 MODEL 10379278 ncrna LOC106149965 uncharacterized LOC106149965 NW_004955458 9802872 9807999 + 106149965 AGCD01047662;GBCE01168777;XR_001236458;XR_001236459 MODEL 8711622 pseudo LOC102020690 L-lactate dehydrogenase A chain pseudogene NW_004955428 23400275 23400773 - 102020690 AGCD01028222 MODEL 9066134 ncrna LOC102005685 uncharacterized LOC102005685 NW_004955412 2045158 2062851 - 102005685 AGCD01012534;GBDF01262267;XR_259966 MODEL 8977650 ncrna LOC102013599 uncharacterized LOC102013599 NW_004955471 11197604 11202115 - 102013599 AGCD01053249;GBBH01075240;XR_001237058 MODEL 39134373 misc_rna 7SK 7SK RNA 8996451 ncrna LOC102012834 uncharacterized LOC102012834 NW_004955409 11180475 11194137 + 102012834 AGCD01009500;AGCD01009501;GBBH01138314;XR_001232647;XR_001232648 MODEL 8879772 protein-coding Ddx52 DExD-box helicase 52 FOUND IN nucleolus (ortholog) NW_004955451 409827 437757 + 102020510 AGCD01042934;AGCD01042935;GBBH01126733;XM_005393911 XP_005393968 MODEL 8909570 ncrna LOC102009308 uncharacterized LOC102009308 NW_004955431 13033825 13037782 - 102009308 AGCD01030276;GBDF01225489;XR_001234590 MODEL 39134066 misc_rna 7SK 7SK RNA 8943694 ncrna LOC102013232 uncharacterized LOC102013232 NW_004955449 2499555 2513694 - 102013232 AGCD01041828;GBDF01307257;XR_262485 MODEL 9023177 protein-coding Ankrd52 ankyrin repeat domain 52 NW_004955458 3849400 3867167 - 102027721 AGCD01047351;GBBH01228075;GBCB01039149;XM_013520831 XP_013376285 MODEL 8716117 pseudo LOC102008549 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 pseudogene NW_004955495 3015938 3016703 + 102008549 AGCD01061815 MODEL 39131859 rrna 5S_rRNA 5S ribosomal RNA 39132063 rrna 5S_rRNA 5S ribosomal RNA 8720069 pseudo LOC102016205 chondroitin sulfate N-acetylgalactosaminyltransferase 2-like NW_004955442 17178781 17201854 - 102016205 AGCD01037944;AGCD01037945;AGCD01037946 MODEL 8849920 pseudo LOC102011632 dnaJ homolog subfamily B member 6-like NW_004955410 15884222 15890903 + 102011632 AGCD01010941 MODEL 8880027 protein-coding Gria1 glutamate ionotropic receptor AMPA type subunit 1 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to amine stimulus (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; Reelin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN neuronal cell body; AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog) NW_004955408 7912223 8226241 + 102026397 AGCD01008209;AGCD01008210;AGCD01008211;AGCD01008212;AGCD01008213;AGCD01008214;GBDJ01377186;XM_005376179;XM_005376180;XM_005376183;XM_005376185 XP_005376236;XP_005376237;XP_005376240;XP_005376242 MODEL 8798804 protein-coding LOC102020325 uncharacterized LOC102020325 NW_004955414 15650867 15654793 - 102020325 AGCD01015187;GBDF01003766;XM_005379874;XR_001233063 XP_005379931 MODEL 8728818 pseudo LOC102007808 T-complex protein 1 subunit delta pseudogene NW_004955434 3956987 3963609 + 102007808 AGCD01032151;AGCD01032152;XR_261648 MODEL 8842102 protein-coding LOC102003853 myosin-3 ENCODES a protein that exhibits actin filament binding (ortholog); ATP hydrolysis activity (ortholog); microfilament motor activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); contractures, pterygia, and spondylocarpotarsal fusion syndrome 1A (ortholog); FOUND IN contractile muscle fiber (ortholog); myosin complex (ortholog) NW_004955467 6561609 6583228 + 102003853 AGCD01051416;AGCD01051417;GBDF01285104;XM_005399362 XP_005399419 MODEL 8799202 ncrna LOC102015428 uncharacterized LOC102015428 NW_004955429 21524845 21543864 - 102015428 AGCD01029005;GBDF01194430;XR_261375;XR_261376 MODEL 9046686 protein-coding Kcnmb2 potassium calcium-activated channel subfamily M regulatory beta subunit 2 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); Premature Obstetric Labor (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955420 7797404 8164199 + 102009389 AGCD01020706;AGCD01020707;AGCD01020708;AGCD01020709;AGCD01020710;AGCD01020711;AGCD01020712;GBDJ01305701;XM_005383031;XM_013513318;XM_013513320;XM_013513321 XP_005383088;XP_013368772;XP_013368774;XP_013368775 MODEL 8719387 protein-coding Eif2s3 eukaryotic translation initiation factor 2 subunit gamma ENCODES a protein that exhibits translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); MEHMO syndrome (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); nucleus (ortholog) NW_004955509 4437044 4457819 + 102016732 AGCD01066065;AGCD01066066;AGCD01066067;GBCQ01034165;XM_005407839 XP_005407896 MODEL 8966791 pseudo LOC102014713 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955551 1042153 1043141 - 102014713 AGCD01072688 MODEL 8997545 pseudo LOC102021079 RNA-binding protein EWS-like NW_004955404 18511209 18513013 - 102021079 AGCD01003618 MODEL 8802316 protein-coding Dipk1a divergent protein kinase domain 1A ASSOCIATED WITH Diamond-Blackfan anemia (ortholog) NW_004955423 1651562 1748651 + 102021023 AGCD01023444;AGCD01023445;AGCD01023446;AGCD01023447;AGCD01023448;AGCD01023449;AGCD01023450;AGCD01023451;GBCE01142261;XM_005385041 XP_005385098 MODEL 8996557 ncrna LOC102015826 uncharacterized LOC102015826 NW_004955413 16848152 16865614 - 102015826 AGCD01014117;GBCQ01176213;XR_001233041;XR_001233042;XR_260082 MODEL 8973101 protein-coding LOC102012047 PRAME family member 9/15-like NW_004955618 227974 229557 - 102012047 AGCD01077320;XM_013510149 XP_013365603 MODEL 8929285 protein-coding Gria2 glutamate ionotropic receptor AMPA type subunit 2 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to amine stimulus (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic rhinitis (ortholog); amphetamine abuse (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog); axon (ortholog) NW_004955471 9970396 10108871 - 102011196 AGCD01053222;AGCD01053223;AGCD01053224;AGCD01053225;AGCD01053226;GBDF01254377;XM_005400940;XM_005400941;XM_005400942;XM_005400943;XR_001237063 XP_005400997;XP_005400998;XP_005400999;XP_005401000 MODEL 8703262 protein-coding Ciroz ciliated left-right organizer protein containing ZP-N domains INVOLVED IN determination of left/right symmetry (ortholog); establishment of left/right asymmetry (ortholog); heart development (ortholog); ASSOCIATED WITH dextrocardia (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 2691850 2717340 + 102020345 AGCD01059006;GBDF01112771;XM_005404305 XP_005404362 MODEL 8706057 protein-coding LOC102016572 granzyme B-like NW_004955409 35563970 35566671 + 102016572 AGCD01010426;XM_005377174 XP_005377231 MODEL 9052103 protein-coding A4galt alpha 1,4-galactosyltransferase (P1PK blood group) ENCODES a protein that exhibits galactosyltransferase activity (ortholog); lactosylceramide 4-alpha-galactosyltransferase activity (ortholog); toxic substance binding (ortholog); INVOLVED IN globoside biosynthetic process (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); Caffey disease (ortholog); NOR POLYAGGLUTINATION SYNDROME (ortholog); FOUND IN membrane (ortholog) NW_004955413 28018363 28038359 - 102012849 AGCD01014543;AGCD01014544;GBDJ01313989;XM_005379423 XP_005379480 MODEL 8863087 protein-coding Daw1 dynein assembly factor with WD repeats 1 INVOLVED IN cerebrospinal fluid circulation (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); Primary Ciliary Dyskinesia 52 (ortholog) NW_004955453 6736998 6788214 - 102005887 AGCD01044729;AGCD01044730;AGCD01044731;GBDF01045707;XM_005395436;XM_005395438;XM_013519986 XP_005395493;XP_005395495;XP_013375440 MODEL 8709430 ncrna LOC102017705 uncharacterized LOC102017705 NW_004955439 13711628 13716911 + 102017705 AGCD01035964;GBDF01041651;XR_261989 MODEL 9053504 protein-coding LOC102014331 cytochrome c oxidase assembly protein COX19 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN intracellular copper ion homeostasis (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); protein maturation (ortholog); FOUND IN cytosol (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955460 8689706 8697494 - 102014331 AGCD01048530;GBCE01005009;XM_005397795 XP_005397852 MODEL 9038617 protein-coding Ankrd53 ankyrin repeat domain 53 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); positive regulation of microtubule polymerization (ortholog); regulation of mitotic cytokinesis (ortholog); FOUND IN spindle (ortholog); spindle pole (ortholog) NW_004955424 14247070 14253072 - 102023820 AGCD01024648;GBDF01123101;XM_013514588 XP_013370042 MODEL 8828083 protein-coding Jazf1 JAZF zinc finger 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); Prostatic Neoplasms (ortholog); systemic lupus erythematosus (ortholog); FOUND IN nucleoplasm (ortholog); transcription repressor complex (ortholog) NW_004955410 29446082 29583383 - 102010345 AGCD01011292;AGCD01011293;GBBH01135337;XM_013510615 XP_013366069 MODEL 9054170 protein-coding Erp29 endoplasmic reticulum protein 29 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); negative regulation of gene expression (ortholog); negative regulation of protein secretion (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung adenocarcinoma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955482 8572227 8579589 + 102006663 AGCD01057536;AGCD01057537;GBDF01045015;XM_005403185;XM_005403186 XP_005403242;XP_005403243 MODEL 8957231 ncrna LOC102009732 uncharacterized LOC102009732 NW_004955424 3418563 3425506 - 102009732 AGCD01024310;GBDF01162625;XR_261036 MODEL 8983212 protein-coding LOC102019320 mamu class II histocompatibility antigen, DR alpha chain ENCODES a protein that exhibits peptide antigen binding (ortholog); polysaccharide binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of peptide or polysaccharide antigen via MHC class II (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); Asthma and Nasal Polyps (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) NW_004955437 1109735 1114742 + 102019320 AGCD01034190;GBBH01030587;XM_005389449 XP_005389506 MODEL 8805981 protein-coding Cstf2 cleavage stimulation factor subunit 2 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); mRNA 3'-end processing (ortholog); regulation of mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH X-Linked Intellectual Developmental Disorder 113 (ortholog); FOUND IN cleavage body (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); nuclear body (ortholog) NW_004955503 6949901 6971281 + 102022623 AGCD01064776;GBDI01166416;XM_005406940;XM_005406941;XM_005406942 XP_005406997;XP_005406998;XP_005406999 MODEL 8790775 pseudo LOC102021837 POU domain, class 5, transcription factor 1-like NW_004955405 15556055 15559935 - 102021837 AGCD01004948 MODEL 8847718 protein-coding Fcn1 ficolin 1 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); pattern recognition receptor activity (ortholog); sialic acid binding (ortholog); INVOLVED IN cell surface pattern recognition receptor signaling pathway (ortholog); complement activation, lectin pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN plasma membrane (ortholog); symbiont cell surface (ortholog) NW_004955513 3690550 3697785 - 102026140 AGCD01066908;GBDI01220302;XM_005408469;XM_005408470;XM_005408471;XM_013506743 XP_005408526;XP_005408527;XP_005408528;XP_013362197 MODEL 8826072 protein-coding Ilf2 interleukin enhancer binding factor 2 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955545 308560 316053 - 102018983 AGCD01071783;AGCD01071784;GBDK01416208;XM_005411437;XM_005411438 XP_005411494;XP_005411495 MODEL 9038956 pseudo LOC102010436 centromere protein L-like NW_004955402 50936205 51007657 + 102010436 AGCD01001288;AGCD01001289 MODEL 8953570 protein-coding Kcnmb3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955420 8428823 8445940 - 102010810 AGCD01020719;GBDF01264141;XM_005383036 XP_005383093 MODEL 9010434 pseudo LOC102012837 glycerophosphocholine phosphodiesterase GPCPD1 pseudogene NW_004955410 7980036 7985561 - 102012837 AGCD01010730 MODEL 9007790 protein-coding Btnl10 Butyrophilin-like protein 10 NW_004955581 62183 69040 + 102011066 AGCD01075656;GBBH01076877;XM_005414227 XP_005414284 MODEL 8822491 ncrna LOC102008554 uncharacterized LOC102008554 NW_004955425 10486431 10493561 + 102008554 AGCD01025446;GBDF01209722;XR_261137 MODEL 39131860 rrna 5S_rRNA 5S ribosomal RNA 8702276 pseudo LOC102008196 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 pseudogene NW_004955410 6003925 6016151 - 102008196 AGCD01010695 MODEL 9025358 protein-coding Cpxm1 carboxypeptidase X, M14 family member 1 FOUND IN extracellular space (ortholog) NW_004955415 13756752 13763764 - 102017563 AGCD01016266;AGCD01016267;GBCE01030643;GBDJ01084283;XM_005380761 XP_005380818 MODEL 8812928 protein-coding Drosha drosha ribonuclease III ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); lipopolysaccharide binding (ortholog); primary miRNA binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH esophageal atresia (ortholog); hepatoblastoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN glutamatergic synapse (ortholog); microprocessor complex (ortholog); nucleoplasm (ortholog) NW_004955426 17387595 17505126 - 102019296 AGCD01026501;AGCD01026502;GBBH01076250;XM_005386146;XM_005386147;XM_005386148;XM_013514978;XM_013514979;XM_013514980 XP_005386203;XP_005386204;XP_005386205;XP_013370432;XP_013370433;XP_013370434 MODEL 8843144 pseudo LOC102013951 eukaryotic translation initiation factor 5 pseudogene NW_004955502 5595726 5597390 - 102013951 AGCD01064373 MODEL 8774363 protein-coding Iftap intraflagellar transport associated protein ENCODES a protein that exhibits intraciliary transport particle A binding (ortholog); INVOLVED IN acrosome reaction (ortholog); fertilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cytosol (ortholog) NW_004955422 9804012 9867580 - 102003882 AGCD01022721;AGCD01022722;AGCD01022723;GBCE01133930;XM_005384101;XM_005384102 XP_005384158;XP_005384159 MODEL 8744344 protein-coding Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 ENCODES a protein that exhibits CTPase activity (ortholog); GTPase activity (ortholog); ribonucleoside triphosphate phosphatase activity (ortholog); INVOLVED IN CTP catabolic process (ortholog); GTP metabolic process (ortholog); nucleobase-containing small molecule catabolic process (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) NW_004955507 5552788 5594911 + 102016297 AGCD01065679;AGCD01065680;GBDF01113293;XM_005407671 XP_005407728 MODEL 8838552 pseudo LOC102020692 olfactory receptor 1052-like NW_004955511 15838 16740 - 102020692 AGCD01066308 MODEL 8939356 protein-coding LOC102003857 mediator of RNA polymerase II transcription subunit 6-like NW_004955413 23892506 23893445 - 102003857 AGCD01014339;XM_005379202;XM_013511365 XP_005379259;XP_013366819 MODEL 39134374 misc_rna 7SK 7SK RNA 9016581 pseudo LOC102013602 zinc finger protein 14-like NW_004955415 31469208 31473139 - 102013602 AGCD01016676;AGCD01016677 MODEL 39134067 misc_rna 7SK 7SK RNA 8887229 ncrna LOC102019322 uncharacterized LOC102019322 NW_004955539 512748 523203 + 102019322 AGCD01071185;GBDF01010156;XR_264813 MODEL 9008904 protein-coding Jcad junctional cadherin 5 associated INVOLVED IN positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955429 21954274 22038953 + 102019936 AGCD01029015;AGCD01029016;GBDJ01403706;XM_013515499;XR_001234529;XR_001234530;XR_001234531;XR_001234532;XR_001234533;XR_001234534;XR_001234535 XP_013370953 MODEL 8889748 pseudo LOC102009309 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955514 3732965 3733577 - 102009309 AGCD01067111 MODEL 9029091 protein-coding Acbd4 acyl-CoA binding domain containing 4 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 17833985 17840071 + 102024637 AGCD01043775;AGCD01043776;GBDI01062558;XM_005394568;XM_005394569;XM_005394570;XM_005394571;XM_005394572 XP_005394625;XP_005394626;XP_005394627;XP_005394628;XP_005394629 MODEL 8994994 pseudo LOC102012048 60S ribosomal protein L12-like NW_004955403 50676234 50697887 - 102012048 AGCD01002969 MODEL 39132064 rrna 5S_rRNA 5S ribosomal RNA 8804589 protein-coding Hspb2 heat shock protein family B (small) member 2 INVOLVED IN somatic muscle development (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 13628098 13631575 + 102024437 AGCD01012843;GBCE01145042;XM_005378099 XP_005378156 MODEL 8922029 protein-coding CUNH1orf52 chromosome unknown C1orf52 homolog FOUND IN nucleoplasm (ortholog) NW_004955423 8728976 8735511 + 102025376 AGCD01023635;GBDJ01349232;XM_005385140 XP_005385197 MODEL 9042876 ncrna LOC102003860 uncharacterized LOC102003860 NW_004955470 10705641 10717884 + 102003860 AGCD01052875;GBCE01089457;XR_263497 MODEL 10325213 ncrna LOC106149966 uncharacterized LOC106149966 NW_004955458 9762195 9774375 + 106149966 AGCD01047662;XR_001236460 MODEL 8837874 protein-coding Kcnmb4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955405 10559074 10615744 + 102028156 AGCD01004816;GBCE01098046;GBCQ01067527;XM_005374310 XP_005374367 MODEL 8789063 protein-coding Daxx death domain associated protein ENCODES a protein that exhibits ATP-dependent H3-H4 histone complex chaperone activity (ortholog); enzyme binding (ortholog); histone binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); apoptotic signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN aldosterone signaling pathway; histone modification pathway; p53 signaling pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); appendiceal neoplasm (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell body (ortholog); cell cortex (ortholog); chromosome, centromeric region (ortholog) NW_004955437 1869692 1874041 - 102003905 AGCD01034241;GBDF01047879;XM_013516888 XP_013372342 MODEL 39131861 rrna 5S_rRNA 5S ribosomal RNA 8838639 protein-coding LOC102024546 zinc finger protein 420 NW_004955468 1759716 1837958 + 102024546 AGCD01051780;AGCD01051781;AGCD01051782;GBDF01277928;XM_005399882;XM_005399883;XM_013522305;XM_013522306;XM_013522307;XM_013522308;XM_013522309;XM_013522310;XM_013522311;XM_013522312;XM_013522313;XM_013522314;XM_013522315 XP_005399939;XP_005399940;XP_013377759;XP_013377760;XP_013377761;XP_013377762;XP_013377763;XP_013377764;XP_013377765;XP_013377766;XP_013377767;XP_013377768;XP_013377769 MODEL 8893974 protein-coding LOC102020326 olfactory receptor 51A7 NW_004955414 20512630 20513568 + 102020326 AGCD01015377;XM_005380059 XP_005380116 MODEL 9020113 pseudo LOC102017715 sialic acid-binding Ig-like lectin 13 NW_004955558 1206318 1210776 - 102017715 AGCD01073422 MODEL 8720505 pseudo LOC102014332 thyroid hormone receptor-associated protein 3 pseudogene NW_004955409 28045982 28056875 - 102014332 AGCD01010226 MODEL 9005639 pseudo LOC102014714 homer protein homolog 2 pseudogene NW_004955555 1146938 1148430 + 102014714 AGCD01073058;XM_005412436;XM_005412437 MODEL 8921746 protein-coding Ankrd54 ankyrin repeat domain 54 ENCODES a protein that exhibits protein kinase regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); positive regulation of erythrocyte differentiation (ortholog); regulation of intracellular signal transduction (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); nucleus (ortholog) NW_004955413 24203653 24216702 - 102011426 AGCD01014356;GBCE01002318;XM_005379229 XP_005379286 MODEL 8998782 protein-coding LOC102009733 probable N-acetyltransferase CML1 NW_004955424 11899258 11900803 - 102009733 AGCD01024576;GBCQ01149453;XM_013514700 XP_013370154 MODEL 9008032 protein-coding Igbp1 immunoglobulin binding protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); mitogen-activated protein kinase kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of stress-activated MAPK cascade (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); corpus callosum agenesis-intellectual disability-coloboma-micrognathia syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); microtubule (ortholog) NW_004955475 9671162 9694926 + 102020332 AGCD01055069;GBDK01196227;XM_005401610;XM_005401612;XM_005401613;XM_013502864;XM_013502865 XP_005401667;XP_005401669;XP_005401670;XP_013358318;XP_013358319 MODEL 8986317 ncrna LOC102015834 uncharacterized LOC102015834 NW_004955472 3820469 3824070 + 102015834 AGCD01053522;GBDF01306419;XR_263550 MODEL 8881977 protein-coding LOC102011202 circumsporozoite protein-like NW_004955478 6863782 6864540 - 102011202 AGCD01055921;AGCD01055922;XM_005402156;XM_013503235;XM_013503236;XM_013503237 XP_005402213;XP_013358689;XP_013358690;XP_013358691 MODEL 9017209 protein-coding LOC102013233 late cornified envelope protein 1A NW_004955592 591385 593007 - 102013233 AGCD01076319;GBCE01061985;XM_005414620 XP_005414677 MODEL 8837964 protein-coding Cstf2t cleavage stimulation factor subunit 2 tau variant ENCODES a protein that exhibits RNA binding (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway NW_004955425 6830775 6834799 - 102004730 AGCD01025375;GBDJ01389913;XM_005385903 XP_005385960 MODEL 8709420 ncrna LOC102016575 uncharacterized LOC102016575 NW_004955467 1729810 1730372 + 102016575 AGCD01051282;GBCE01002421;XR_263330 MODEL 8773479 ncrna LOC102011636 uncharacterized LOC102011636 NW_004955412 12761973 12776122 - 102011636 AGCD01012825;GBDF01277129;XR_001232873 MODEL 8928554 protein-coding Cirsr corepressor of RBPJ and splicing regulator ENCODES a protein that exhibits histone deacetylase binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN centrosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955449 960524 993720 + 102007066 AGCD01041778;AGCD01041779;AGCD01041780;GBDF01118227;XM_005393189 XP_005393246 MODEL 8724043 protein-coding LOC102016208 vomeronasal type-1 receptor 4-like NW_004955569 1032355 1033407 + 102016208 AGCD01074632;XM_005413517 XP_005413574 MODEL 8926852 protein-coding A4gnt alpha-1,4-N-acetylglucosaminyltransferase ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of epithelial cell proliferation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); pancreatic cancer (ortholog) NW_004955501 881851 887977 + 102016934 AGCD01064043;XM_005406864 XP_005406921 MODEL 9068134 protein-coding LOC102015432 olfactory receptor 8K3-like NW_004955511 1171624 1172571 + 102015432 AGCD01066359;XM_005408225 XP_005408282 MODEL 9019832 pseudo LOC102008200 septin-2 pseudogene NW_004955463 231431 232195 - 102008200 AGCD01049478 MODEL 9048784 protein-coding Btnl2 butyrophilin like 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of interleukin-2 production (ortholog); positive regulation of T cell proliferation (ortholog); ASSOCIATED WITH berylliosis (ortholog); coronary artery disease (ortholog); Graves' disease (ortholog) NW_004955437 1084330 1101751 - 102018528 AGCD01034189;GBDJ01214554;XM_005389446;XM_005389447;XM_005389448 XP_005389503;XP_005389504;XP_005389505 MODEL 9012435 ncrna LOC102008944 uncharacterized LOC102008944 NW_004955417 25705054 25707401 - 102008944 AGCD01018493;GBCE01099798;XR_260495 MODEL 8805922 ncrna LOC102021087 uncharacterized LOC102021087 NW_004955453 16394428 16442577 + 102021087 AGCD01044902;AGCD01044903;AGCD01044904;GBDF01083674;XR_001236196;XR_001236197;XR_001236198;XR_262753 MODEL 8831437 protein-coding Erp44 endoplasmic reticulum protein 44 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); protein folding (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955419 25584404 25665590 + 102013936 AGCD01020388;AGCD01020389;GBCQ01063714;XM_005382816 XP_005382873 MODEL 8806949 protein-coding LOC102021842 5-hydroxyisourate hydrolase-like NW_004955454 3525747 3529939 - 102021842 AGCD01045087;GBCQ01176230;XM_005395943;XM_013520070 XP_005396000;XP_013375524 MODEL 9000915 protein-coding Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 ENCODES a protein that exhibits apyrase activity (ortholog); nucleoside diphosphate phosphatase activity (ortholog); ribonucleoside triphosphate phosphatase activity (ortholog); INVOLVED IN nucleoside diphosphate biosynthetic process (ortholog); nucleoside monophosphate biosynthetic process (ortholog); ribonucleoside diphosphate catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; FOUND IN membrane (ortholog) NW_004955513 5352843 5357671 - 102014159 AGCD01066968;GBCQ01038627;XM_005408613;XM_013506722 XP_005408670;XP_013362176 MODEL 9008028 ncrna LOC102020328 uncharacterized LOC102020328 NW_004955414 33108363 33109387 - 102020328 AGCD01015798;GBDF01127948;XR_260225 MODEL 8873335 protein-coding Dipk1b divergent protein kinase domain 1B NW_004955513 4120061 4123964 - 102025494 AGCD01066920;GBBH01186691;GBDJ01316687;XM_005408647 XP_005408704 MODEL 39134068 misc_rna 7SK 7SK RNA 8799325 protein-coding Gria3 glutamate ionotropic receptor AMPA type subunit 3 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN cellular response to glycine (ortholog); long-term synaptic potentiation (ortholog); protein heterotetramerization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); developmental and epileptic encephalopathy (ortholog); Developmental Disabilities (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog); dendrite (ortholog) NW_004955473 11283642 11574836 - 102020657 AGCD01054139;GBDJ01359746;XM_005401286;XM_005401287;XM_005401288;XM_005401289 XP_005401343;XP_005401344;XP_005401345;XP_005401346 MODEL 8721033 ncrna LOC102009735 uncharacterized LOC102009735 NW_004955500 4775193 4791358 - 102009735 AGCD01063811;GBDF01219713;XR_001231484;XR_001231485;XR_001231486 MODEL 8738003 ncrna LOC102008558 uncharacterized LOC102008558 NW_004955430 15103778 15104993 + 102008558 AGCD01029588;GBDF01089462;XR_261428 MODEL 8928036 ncrna LOC102013605 uncharacterized LOC102013605 NW_004955478 10038664 10039724 - 102013605 AGCD01056117;GBDF01253856;XR_263713 MODEL 8735215 protein-coding LOC102019324 tubulin beta-3 chain NW_004955541 3390452 3401774 + 102019324 AGCD01071442;AGCD01071443;GBBH01225915;XM_005411071 XP_005411128 MODEL 8916035 pseudo LOC102011203 multifunctional protein ADE2 pseudogene NW_004955481 3893416 3894341 + 102011203 AGCD01056921;XR_263775 MODEL 8754794 ncrna LOC102005686 uncharacterized LOC102005686 NW_004955465 6940344 6948806 - 102005686 AGCD01050449;GBCB01122620;XR_263246 MODEL 8818010 pseudo LOC102013952 tyrosine--tRNA ligase, cytoplasmic pseudogene NW_004955503 7176606 7183842 + 102013952 AGCD01064783 MODEL 8846286 protein-coding Eif3a eukaryotic translation initiation factor 3 subunit A ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN formation of cytoplasmic translation initiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) NW_004955431 23542842 23578892 - 102005830 AGCD01030538;AGCD01030539;AGCD01030540;GBDJ01086793;XM_005387883 XP_005387940 MODEL 9025460 protein-coding Drp2 dystrophin related protein 2 INVOLVED IN synapse organization (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type X (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955503 7383567 7423489 + 102024361 AGCD01064789;AGCD01064790;GBDF01029954;XM_005406945;XM_005406946 XP_005407002;XP_005407003 MODEL 8744881 protein-coding Ddx53 DEAD-box helicase 53 FOUND IN nucleoplasm (ortholog) NW_004955509 3352639 3354949 + 102012786 AGCD01066020;GBDF01118543;XM_013506291 XP_013361745 MODEL 8816103 protein-coding Cpxm2 carboxypeptidase X, M14 family member 2 ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog) NW_004955477 1840642 1975531 - 102027744 AGCD01055512;AGCD01055513;AGCD01055514;AGCD01055515;GBCE01000985;XM_005401963 XP_005402020 MODEL 8807808 pseudo LOC102024551 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955469 9911436 9913395 + 102024551 AGCD01052520 MODEL 8902881 protein-coding LOC102010437 vomeronasal type-1 receptor 4-like NW_004955603 500248 501171 - 102010437 AGCD01076850;XM_005414846 XP_005414903 MODEL 9045940 protein-coding Ilf3 interleukin enhancer binding factor 3 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of translation (ortholog); negative regulation of viral genome replication (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955495 1814012 1844605 + 102010277 AGCD01061733;AGCD01061734;AGCD01061735;GBDF01047065;XM_005405615;XM_005405616;XM_005405618;XM_005405619;XM_005405621;XM_005405622;XM_005405623;XM_013505145;XM_013505146 XP_005405672;XP_005405673;XP_005405675;XP_005405676;XP_005405678;XP_005405679;XP_005405680;XP_013360599;XP_013360600 MODEL 9011211 pseudo LOC102015433 non-histone chromosomal protein HMG-14 pseudogene NW_004955431 1969993 1970549 - 102015433 AGCD01029919 MODEL 39134375 misc_rna 7SK 7SK RNA 8829910 protein-coding Ankrd55 ankyrin repeat domain 55 ASSOCIATED WITH Chloracne (ortholog); rheumatoid arthritis (ortholog) NW_004955446 11622317 11713690 + 102013227 AGCD01040208;AGCD01040209;GBDJ01034588;XM_005392685;XM_005392686;XM_005392687 XP_005392742;XP_005392743;XP_005392744 MODEL 8839720 protein-coding Igdcc3 immunoglobulin superfamily DCC subclass member 3 INVOLVED IN neuromuscular process controlling balance (ortholog) NW_004955450 10087900 10121671 + 102007720 AGCD01042606;AGCD01042607;GBCE01023302;XM_013519046 XP_013374500 MODEL 8919256 protein-coding Jchain joining chain of multimeric IgA and IgM ENCODES a protein that exhibits IgA binding (ortholog); immunoglobulin receptor binding (ortholog); peptidoglycan binding (ortholog); INVOLVED IN adaptive immune response (ortholog); glomerular filtration (ortholog); innate immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN dimeric IgA immunoglobulin complex (ortholog); extracellular space (ortholog); hexameric IgM immunoglobulin complex (ortholog) NW_004955447 2292387 2321596 + 102024064 AGCD01040538;GBCQ01127862;XM_005392781;XM_005392783 XP_005392838;XP_005392840 MODEL 8805199 pseudo LOC102016576 40S ribosomal protein S19 pseudogene NW_004955412 15418849 15419823 - 102016576 AGCD01012873 MODEL 39132065 rrna 5S_rRNA 5S ribosomal RNA 10243333 ncrna LOC106149967 uncharacterized LOC106149967 NW_004955458 9925818 9930758 + 106149967 AGCD01047667;GBDF01005033;XR_001236461 MODEL 9012504 pseudo LOC102011641 uracil-DNA glycosylase pseudogene NW_004955413 26353261 26357509 - 102011641 AGCD01014435;XM_005379326;XM_005379327 MODEL 8797248 protein-coding Acbd5 acyl-CoA binding domain containing 5 INVOLVED IN pexophagy (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN peroxisome (ortholog) NW_004955429 2623042 2661182 - 102027662 AGCD01028433;AGCD01028434;AGCD01028435;GBCQ01006507;XM_005386871;XM_005386872;XM_005386873;XM_005386874 XP_005386928;XP_005386929;XP_005386930;XP_005386931 MODEL 8879122 protein-coding CUNH1orf53 chromosome unknown C1orf53 homolog FOUND IN mitochondrion (ortholog) NW_004955406 34333868 34339032 + 102026290 AGCD01006501;GBDF01118909;XM_005375123;XM_013521898 XP_005375180;XP_013377352 MODEL 8932641 protein-coding Dazap1 DAZ associated protein 1 ENCODES a protein that exhibits poly(G) binding (ortholog); poly(U) RNA binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN cell population proliferation (ortholog); maternal placenta development (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955495 6499553 6516227 - 102004293 AGCD01062082;GBBH01091781;GBCB01025416;XM_005405970;XM_005405971;XM_005405972;XM_005405973 XP_005406027;XP_005406028;XP_005406029;XP_005406030 MODEL 8733195 protein-coding Hspb3 heat shock protein family B (small) member 3 ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 4 (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); spinal muscular atrophy (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955446 13113854 13114599 - 102023858 AGCD01040246;GBCB01056299;XM_005392716 XP_005392773 MODEL 9031390 protein-coding LOC102020693 uncharacterized LOC102020693 NW_004955513 1040402 1043596 + 102020693 AGCD01066838;GBDK01224462;XM_005408359 XP_005408416 MODEL 8978326 protein-coding Cisd1 CDGSH iron sulfur domain 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); identical protein binding (ortholog); L-cysteine transaminase activity (ortholog); INVOLVED IN protein maturation (ortholog); regulation of cellular respiration (ortholog); FOUND IN cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955425 12009704 12020956 + 102008748 AGCD01025498;GBDF01002017;GBDI01061945;XM_013514872 XP_013370326 MODEL 8874124 protein-coding Ilk integrin linked kinase ENCODES a protein that exhibits ATP binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH cardiomyopathy (ortholog); Cocaine-Related Disorders (ortholog); Colonic Polyps (ortholog); FOUND IN axon (ortholog); cell-cell junction (ortholog); centrosome (ortholog) NW_004955414 22316243 22322979 + 102027399 AGCD01015452;GBDF01047463;XM_005380164 XP_005380221 MODEL 8872071 ncrna LOC102005689 uncharacterized LOC102005689 NW_004955467 6901040 6907444 - 102005689 AGCD01051425;GBDF01303832;XR_263347 MODEL 8880309 protein-coding Fcn3 ficolin 3 ENCODES a protein that exhibits antigen binding (ortholog); carbohydrate derivative binding (ortholog); identical protein binding (ortholog); INVOLVED IN complement activation (ortholog); complement activation, lectin pathway (ortholog); negative regulation of RNA biosynthetic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Immunodeficiency due to Ficolin 3 Deficiency (ortholog); microcephaly (ortholog); FOUND IN symbiont cell surface (ortholog) NW_004955452 6630548 6635334 - 102003722 AGCD01044117;GBDK01000209;XM_005394905 XP_005394962 MODEL 8714120 ncrna LOC102013953 uncharacterized LOC102013953 NW_004955504 3387462 3397789 + 102013953 AGCD01064868;GBCB01085852;XR_264292 MODEL 9059353 ncrna LOC102014716 uncharacterized LOC102014716 NW_004955444 3424793 3436170 - 102014716 AGCD01038790;GBDF01055417;XR_001235531;XR_001235532;XR_262231 MODEL 8974163 pseudo LOC102017725 prefoldin subunit 6 pseudogene NW_004955592 408866 409682 - 102017725 AGCD01076312 MODEL 8968950 protein-coding Aaas aladin WD repeat nucleoporin INVOLVED IN fertilization (ortholog); glutathione metabolic process (ortholog); learning (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); achalasia (ortholog); genetic disease (ortholog); FOUND IN mitotic spindle (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955458 567487 577228 - 102019145 AGCD01047134;AGCD01047135;GBDF01011285;XM_005397171 XP_005397228 MODEL 9045231 pseudo LOC102012050 protein regulator of cytokinesis 1-like NW_004955451 11417605 11442353 + 102012050 AGCD01043354 MODEL 8771072 pseudo LOC102009311 mitochondrial fission factor pseudogene NW_004955516 2393052 2393940 - 102009311 AGCD01067455 MODEL 8835860 protein-coding Entr1 endosome associated trafficking regulator 1 INVOLVED IN endocytic recycling (ortholog); positive regulation of cilium assembly (ortholog); positive regulation of protein localization to cilium (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); early endosome (ortholog) NW_004955513 4322002 4329479 + 102026141 AGCD01066925;AGCD01066926;GBCB01003691;GBDF01008499;XM_005408649 XP_005408706 MODEL 8707197 protein-coding LOC102008559 olfactory receptor 1440-like NW_004955511 3846306 3866765 - 102008559 AGCD01066478;AGCD01066479;XM_013506388 XP_013361842 MODEL 39131862 rrna 5S_rRNA 5S ribosomal RNA 10131119 ncrna LOC106149969 uncharacterized LOC106149969 NW_004955458 3721704 3723206 - 106149969 AGCD01047340;GBDF01065268;XR_001236465 MODEL 39132066 rrna 5S_rRNA 5S ribosomal RNA 8720506 ncrna LOC102014334 uncharacterized LOC102014334 NW_004955463 13600074 13616315 + 102014334 AGCD01049875;GBDF01049402;XR_001236642;XR_001236643;XR_001236644;XR_001236645;XR_001236646;XR_263174 MODEL 8824583 protein-coding Ankrd6 ankyrin repeat domain 6 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955411 16206819 16358322 + 102007415 AGCD01011970;AGCD01011971;AGCD01011972;AGCD01011973;GBDF01040122;XM_005377752;XM_005377754;XM_005377757;XM_013510762;XM_013510763;XM_013510764;XM_013510765;XM_013510766;XM_013510767;XM_013510768 XP_005377809;XP_005377811;XP_005377814;XP_013366216;XP_013366217;XP_013366218;XP_013366219;XP_013366220;XP_013366221;XP_013366222 MODEL 8977581 ncrna LOC102008945 uncharacterized LOC102008945 NW_004955418 195005 213629 + 102008945 AGCD01018668;AGCD01018669;GBDF01000281;XR_001233498;XR_001233499 MODEL 8828444 protein-coding LOC102021088 ly-6/neurotoxin-like protein 1 NW_004955454 1461378 1467194 - 102021088 AGCD01044969;GBBH01121655;XM_005395741;XM_005395742;XM_013520254;XM_013520255;XM_013520256 XP_005395798;XP_005395799;XP_013375708;XP_013375709;XP_013375710 MODEL 8844349 ncrna LOC102021847 uncharacterized LOC102021847 NW_004955455 13948091 13950615 - 102021847 AGCD01046080;GBDI01276709;XR_262858 MODEL 8973019 ncrna LOC102010438 uncharacterized LOC102010438 NW_004955649 5929 9935 + 102010438 AGCD01077777;AGCD01077778;GBDJ01151562;XR_265178 MODEL 8974060 protein-coding LOC102013240 janus kinase and microtubule-interacting protein 2 NW_004956233 948 7905 - 102013240 AGCD01079289;XM_005415182 XP_005415239 MODEL 9054331 pseudo LOC102013956 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955428 10433744 10434754 - 102013956 AGCD01027867 MODEL 8748262 protein-coding Dipk1c divergent protein kinase domain 1C ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN dendritic spine development (ortholog); maintenance of synapse structure (ortholog); memory (ortholog) NW_004955402 57878727 57899315 - 102013364 AGCD01001513;GBCE01121416;GBDJ01269128;XM_005373180 XP_005373237 MODEL 8848590 protein-coding Cstf3 cleavage stimulation factor subunit 3 INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); regulation of mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN mRNA cleavage stimulating factor complex (ortholog); nucleoplasm (ortholog) NW_004955422 13049908 13124274 + 102025587 AGCD01022808;AGCD01022809;AGCD01022810;AGCD01022811;GBDF01087650;XM_005384169 XP_005384226 MODEL 9042421 ncrna LOC102009736 uncharacterized LOC102009736 NW_004955425 27635177 27653923 + 102009736 AGCD01025978;GBDJ01039065;XR_001234273;XR_261177 MODEL 8882092 ncrna LOC102015436 uncharacterized LOC102015436 NW_004955517 1432841 1436327 - 102015436 AGCD01067597;GBDK01244529;XR_001231817;XR_001231818 MODEL 8887906 ncrna LOC102003861 uncharacterized LOC102003861 NW_004955472 10850722 10854380 + 102003861 AGCD01053727;GBDF01178480;XR_263568 MODEL 8749075 ncrna LOC102016210 uncharacterized LOC102016210 NW_004955402 1193524 1194521 + 102016210 AGCD01000051;GBBH01053054;XR_001234142 MODEL 8952098 protein-coding Aacs acetoacetyl-CoA synthetase ENCODES a protein that exhibits acetoacetate-CoA ligase activity (ortholog); short-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to cholesterol (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN ketone bodies metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); obesity (ortholog) NW_004955482 4663818 4694170 - 102008532 AGCD01057301;AGCD01057302;AGCD01057303;AGCD01057304;GBBH01139945;GBDF01051990;XM_005403000 XP_005403057 MODEL 8779196 protein-coding Kcnn1 potassium calcium-activated channel subfamily N member 1 ENCODES a protein that exhibits calmodulin binding (ortholog); inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955524 3323188 3344321 - 102012122 AGCD01068882;AGCD01068883;AGCD01068884;GBCB01100685;GBDJ01092787;XM_013507269 XP_013362723 MODEL 8907700 pseudo LOC102013607 TBC1 domain family member 1-like NW_004955481 9976291 9977512 - 102013607 AGCD01057130 MODEL 9055610 protein-coding Jdp2 Jun dimerization protein 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of fat cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955523 140546 169769 - 102009414 AGCD01068435;AGCD01068436;GBCQ01179566;GBDK01231822;XM_013507179 XP_013362633 MODEL 8791037 ncrna LOC102008203 uncharacterized LOC102008203 NW_004955465 240199 264436 + 102008203 AGCD01050306;GBDF01083705;XR_001236725;XR_001236726;XR_001236727;XR_001236728;XR_001236729;XR_001236730;XR_263227 MODEL 9046707 protein-coding Btnl9 butyrophilin like 9 NW_004955530 263915 284368 - 102011359 AGCD01069836;AGCD01069837;AGCD01069838;GBDI01324980;XM_005410120;XM_013507547 XP_005410177;XP_013363001 MODEL 8948317 protein-coding Eif3b eukaryotic translation initiation factor 3 subunit B ENCODES a protein that exhibits RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN IRES-dependent viral translational initiation (ortholog); regulation of translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) NW_004955460 12918349 12941150 - 102017750 AGCD01048664;GBDK01076722;XM_005397880 XP_005397937 MODEL 8836628 protein-coding Errfi1 ERBB receptor feedback inhibitor 1 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN apoptotic process (ortholog); bile acid biosynthetic process (ortholog); cartilage development (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Diabetic Nephropathies (ortholog); endometrial cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955486 4941143 4955693 + 102030200 AGCD01059072;AGCD01059073;GBCE01052630;XM_005404060 XP_005404117 MODEL 8730997 pseudo LOC102015844 60S ribosomal protein L4 pseudogene NW_004955418 30566655 30589110 - 102015844 AGCD01019529;AGCD01019530;AGCD01019531;AGCD01019532;AGCD01019533;AGCD01019534 MODEL 8956473 ncrna LOC102005690 uncharacterized LOC102005690 NW_004955413 2434741 2435420 - 102005690 AGCD01013546;GBDF01017398;XR_260051 MODEL 8793843 protein-coding LOC102007810 glutathione S-transferase Mu 2 NW_004955435 13099385 13175462 + 102007810 AGCD01033184;AGCD01033185;AGCD01033186;AGCD01033187;AGCD01033188;AGCD01033189;AGCD01033190;AGCD01033191;AGCD01033192;AGCD01033193;GBCE01002116;GBDI01010302;XM_005388888 XP_005388945 MODEL 39131864 rrna 5S_rRNA 5S ribosomal RNA 8903112 pseudo LOC102020329 proteasome subunit alpha type-6 pseudogene NW_004955472 12332579 12333266 - 102020329 AGCD01053795 MODEL 9039124 protein-coding LOC102014718 olfactory receptor 1052-like NW_004955568 974705 988293 - 102014718 AGCD01074532;AGCD01074533;XM_005413465 XP_005413522 MODEL 8809409 protein-coding Jhy junctional cadherin complex regulator INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); cell differentiation (ortholog) NW_004955412 23721638 23781935 + 102018580 AGCD01013093;AGCD01013094;AGCD01013095;GBDJ01352357;XM_005378369 XP_005378426 MODEL 8778498 protein-coding LOC102017726 chromosome unknown open reading frame, human C20orf202 NW_004955596 429206 445151 + 102017726 AGCD01076517;AGCD01076518;AGCD01076519;XM_005414711 XP_005414768 MODEL 9052015 ncrna LOC102011204 uncharacterized LOC102011204 NW_004955418 503166 505034 - 102011204 AGCD01018678;GBDF01041809;XR_260531 MODEL 8812108 protein-coding LOC102016581 rap guanine nucleotide exchange factor 2-like NW_004955414 50666 55998 - 102016581 AGCD01014696;GBDF01253057;XM_013511710 XP_013367164 MODEL 8970017 protein-coding Igdcc4 immunoglobulin superfamily DCC subclass member 4 NW_004955450 10057064 10083484 + 102007393 AGCD01042604;AGCD01042605;GBCB01074217;GBDJ01043120;XM_013518877 XP_013374331 MODEL 8867241 ncrna LOC102012054 uncharacterized LOC102012054 NW_004955405 38958635 38968152 + 102012054 AGCD01005493;GBDK01428567;XR_259444 MODEL 8986127 pseudo LOC102011642 ras-related protein Rab-5A pseudogene NW_004955468 5230636 5231184 + 102011642 AGCD01051959 MODEL 8976033 protein-coding Jkamp JNK1/MAPK8 associated membrane protein ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog) NW_004955466 13205424 13225573 + 102008393 AGCD01051152;AGCD01051153;AGCD01051154;GBDF01160049;XM_005399228;XM_005399229;XM_013521952 XP_005399285;XP_005399286;XP_013377406 MODEL 8883750 pseudo LOC102008560 cell division control protein 42 homolog pseudogene NW_004955430 16590042 16591833 - 102008560 AGCD01029642 MODEL 8758345 protein-coding Dsc1 desmocollin 1 INVOLVED IN desmosome maintenance (ortholog); establishment of skin barrier (ortholog); hair follicle morphogenesis (ortholog); ASSOCIATED WITH Chronic Periodontitis (ortholog); melanoma (ortholog); FOUND IN desmosome (ortholog) NW_004955402 18514657 18543449 - 102016654 AGCD01000534;AGCD01000535;GBCC01000947;XM_005372738;XM_005372739 XP_005372795;XP_005372796 MODEL 8753161 protein-coding Dazap2 DAZ associated protein 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN protein destabilization (ortholog); stress granule assembly (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear body (ortholog) NW_004955547 1736945 1741623 + 102024284 AGCD01072245;GBCQ01010362;XM_005411904 XP_005411961 MODEL 8896166 protein-coding Ddx54 DEAD-box helicase 54 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); RNA helicase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN RNA metabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH epilepsy (ortholog); intellectual disability (ortholog); Liver Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955482 9493840 9509916 - 102014566 AGCD01057574;GBCB01043534;XM_005403214;XM_013503585;XM_013503586;XM_013503587 XP_005403271;XP_013359039;XP_013359040;XP_013359041 MODEL 8758048 protein-coding Aadacl2 arylacetamide deacetylase like 2 NW_004955448 2793842 2823083 + 102004868 AGCD01041290;GBCC01015414;XM_013518580 XP_013374034 MODEL 10315948 ncrna LOC106149970 uncharacterized LOC106149970 NW_004955458 5549504 5550194 + 106149970 AGCD01047499;GBDF01112323;XR_001236466 MODEL 8907572 protein-coding Cpz carboxypeptidase Z ENCODES a protein that exhibits carboxypeptidase activity (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) NW_004955514 2572075 2590274 - 102006061 AGCD01067084;GBDF01207234;XM_005408767;XM_005408769 XP_005408824;XP_005408826 MODEL 8708810 protein-coding LOC102024553 olfactory receptor 52E1-like NW_004955414 20797441 20798379 + 102024553 AGCD01015389;XM_005380068 XP_005380125 MODEL 8788048 ncrna LOC102021095 uncharacterized LOC102021095 NW_004955407 37937136 37939739 - 102021095 AGCD01007789;GBDF01111807;XR_259621 MODEL 39134376 misc_rna 7SK 7SK RNA 8865947 ncrna LOC102019329 uncharacterized LOC102019329 NW_004955441 8184704 8197646 + 102019329 AGCD01036977;AGCD01036978;GBDJ01402532;XR_262057 MODEL 8955451 ncrna LOC102021848 uncharacterized LOC102021848 NW_004955407 40111586 40113235 - 102021848 AGCD01007838;GBDF01059141;XR_001231372 MODEL 8796883 ncrna LOC102013960 uncharacterized LOC102013960 NW_004955431 13827196 13842143 + 102013960 AGCD01030312;GBDI01357223;XR_261470 MODEL 8810238 protein-coding Esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine acetylation (ortholog); post-translational protein acetylation (ortholog); regulation of DNA replication (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog) NW_004955402 10207621 10257363 - 102027027 AGCD01000252;AGCD01000253;AGCD01000254;GBCQ01174846;XM_013520167;XM_013520204;XM_013520246;XR_001236265;XR_001236273;XR_001236282 XP_013375621;XP_013375658;XP_013375700 MODEL 8971750 pseudo LOC102012841 LYR motif-containing protein 1 pseudogene NW_004955466 2598628 2602417 - 102012841 AGCD01050748 MODEL 9000818 pseudo LOC102009312 60S ribosomal protein L17 pseudogene NW_004955434 13427369 13427899 + 102009312 AGCD01032402 MODEL 8914794 protein-coding Acbd6 acyl-CoA binding domain containing 6 ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); lipid binding (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); NEURODEVELOPMENTAL DISORDER WITH PROGRESSIVE MOVEMENT ABNORMALITIES (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955406 19481640 19658807 - 102011275 AGCD01006082;AGCD01006083;AGCD01006084;AGCD01006085;AGCD01006086;AGCD01006087;GBDK01324069;XM_005374985;XM_013521346 XP_005375042;XP_013376800 MODEL 8759565 ncrna LOC102003862 uncharacterized LOC102003862 NW_004955474 6739005 6740107 + 102003862 AGCD01054490;GBDF01162687;XR_263599 MODEL 9016744 protein-coding LOC102015439 acyl-coenzyme A thioesterase 1-like NW_004955523 1749817 1868724 - 102015439 AGCD01068541;AGCD01068542;AGCD01068543;AGCD01068544;AGCD01068545;AGCD01068546;AGCD01068547;AGCD01068548;AGCD01068549;GBCB01023483;GBDJ01018057;XM_005409472 XP_005409529 MODEL 8973442 protein-coding Kcnn2 potassium calcium-activated channel subfamily N member 2 ENCODES a protein that exhibits alpha-actinin binding (ortholog); calcium-activated potassium channel activity (ortholog); calmodulin binding (ortholog); INVOLVED IN membrane repolarization during atrial cardiac muscle cell action potential (ortholog); modulation of chemical synaptic transmission (ortholog); monoatomic ion transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); atrial fibrillation (ortholog); cardiac arrest (ortholog); FOUND IN cell surface (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955408 34223523 34366191 + 102020768 AGCD01008898;AGCD01008899;AGCD01008900;AGCD01008901;GBDJ01115690;XM_013506903;XM_013506905 XP_013362357;XP_013362359 MODEL 39132067 rrna 5S_rRNA 5S ribosomal RNA 8712870 protein-coding Fcrl1 Fc receptor like 1 ENCODES a protein that exhibits coreceptor activity (ortholog); INVOLVED IN B cell activation (ortholog); FOUND IN cell surface (ortholog) NW_004955468 9641739 9660743 - 102018819 AGCD01052052;GBDK01419337;XM_005400129;XM_005400130;XM_005400131;XM_005400132 XP_005400186;XP_005400187;XP_005400188;XP_005400189 MODEL 39134069 misc_rna 7SK 7SK RNA 8944841 protein-coding Gria4 glutamate ionotropic receptor AMPA type subunit 4 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); glutamate-gated receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of smooth muscle cell apoptotic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN neuronal cell body; AMPA glutamate receptor complex (ortholog); dendrite (ortholog) NW_004955412 8306187 8644156 + 102024201 AGCD01012717;AGCD01012718;AGCD01012719;AGCD01012720;GBCE01184813;XM_005378006;XM_005378007;XM_005378008;XM_005378009;XM_005378010;XM_005378011;XM_005378012;XM_013511180;XM_013511181;XM_013511182;XM_013511183;XM_013511184 XP_005378063;XP_005378064;XP_005378065;XP_005378066;XP_005378067;XP_005378068;XP_005378069;XP_013366634;XP_013366635;XP_013366636;XP_013366637;XP_013366638 MODEL 8838948 ncrna LOC102010442 uncharacterized LOC102010442 NW_004955452 2929736 2933649 - 102010442 AGCD01043906;GBDF01177228;XR_262642 MODEL 9024305 ncrna LOC102020333 uncharacterized LOC102020333 NW_004955476 9010691 9023839 + 102020333 AGCD01055377;GBDF01053841;XR_001230806 MODEL 39131865 rrna 5S_rRNA 5S ribosomal RNA 8848310 protein-coding LOC102015848 thioredoxin domain-containing protein 8 NW_004955419 16801943 16838029 + 102015848 AGCD01020125;AGCD01020126;GBDF01087312;XM_005382742;XM_005382743;XM_005382745;XM_013513287;XR_260636;XR_260637 XP_005382799;XP_005382800;XP_005382802;XP_013368741 MODEL 8850638 ncrna LOC102007811 uncharacterized LOC102007811 NW_004955436 506358 507779 - 102007811 AGCD01033545;GBCB01129963;XR_261734 MODEL 39131522 protein-coding DIPK1C divergent protein kinase domain 1C 8699537 protein-coding Entrep1 endosomal transmembrane epsin interactor 1 ENCODES a protein that exhibits ubiquitin ligase activator activity (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); negative adaptation of signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) NW_004955434 3615284 3704014 - 102004633 AGCD01032137;AGCD01032138;AGCD01032139;AGCD01032140;AGCD01032141;GBBH01142742;GBCB01007711;XM_005388562 XP_005388619 MODEL 8803654 protein-coding LOC102016211 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like NW_004955581 335182 336350 - 102016211 AGCD01075667;XM_013509744 XP_013365198 MODEL 8839235 protein-coding Hspb6 heat shock protein family B (small) member 6 ENCODES a protein that exhibits protein folding chaperone (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of angiogenesis (ortholog); protein folding (ortholog); ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); heart disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955468 2797076 2799589 + 102022805 AGCD01051838;GBCE01018933;XM_005399971 XP_005400028 MODEL 8806653 ncrna LOC102013608 uncharacterized LOC102013608 NW_004955418 16719050 16722426 + 102013608 AGCD01019128;GBDI01161353;XR_001233486 MODEL 8710676 protein-coding Cisd2 CDGSH iron sulfur domain 2 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); regulation of autophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); type 2 diabetes mellitus (ortholog); Wolfram syndrome 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955496 5656686 5672888 - 102015646 AGCD01062355;AGCD01062356;GBCE01053957;XM_005406245 XP_005406302 MODEL 9062535 protein-coding Ankrd60 ankyrin repeat domain 60 NW_004955445 1311078 1320906 + 102021811 AGCD01039337;GBDF01000243;XM_005392565 XP_005392622 MODEL 8709927 ncrna LOC102014337 uncharacterized LOC102014337 NW_004955412 25816755 25817421 - 102014337 AGCD01013174;GBDK01223923;XR_260023 MODEL 8903922 ncrna LOC102008561 uncharacterized LOC102008561 NW_004955432 20882075 20884968 - 102008561 AGCD01031209;AGCD01031210;XR_261538 MODEL 8738804 protein-coding Igf1 insulin like growth factor 1 ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); insulin receptor binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); PARTICIPATES IN altered insulin-like growth factor signaling pathway; cardiovascular system disease pathway; ceramide signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acromegaly (ortholog); acute kidney failure (ortholog); FOUND IN alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog); exocytic vesicle (ortholog); extracellular space (ortholog) NW_004955405 37505830 37582152 - 102004234 AGCD01005457;GBDJ01018907;XM_005374571;XM_013518800;XM_013518804;XM_013518808;XM_013518811;XM_013518813;XM_013518816;XM_013518821 XP_005374628;XP_013374254;XP_013374258;XP_013374262;XP_013374265;XP_013374267;XP_013374270;XP_013374275 MODEL 9052661 pseudo LOC102008949 tubulin alpha-1A chain-like NW_004955420 26771001 26771926 - 102008949 AGCD01021431 MODEL 8954227 protein-coding LOC102003863 protocadherin beta-7 NW_004955415 12610873 12620570 - 102003863 AGCD01016207;AGCD01016208;XM_013512126 XP_013367580 MODEL 8726924 protein-coding Eif3d eukaryotic translation initiation factor 3 subunit D ENCODES a protein that exhibits mRNA cap binding (ortholog); RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cap-dependent translational initiation (ortholog); formation of cytoplasmic translation initiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) NW_004955413 23096440 23110312 - 102020790 AGCD01014327;GBBH01030582;GBCE01030924;XM_013511591 XP_013367045 MODEL 8842486 pseudo LOC102013244 tetraspanin-7-like NW_004955452 10222211 10222773 - 102013244 AGCD01044271 MODEL 8964952 protein-coding Aadacl3 arylacetamide deacetylase like 3 NW_004955486 577468 586176 - 102019602 AGCD01058861;GBDF01183065;XM_005403938 XP_005403995 MODEL 8870865 protein-coding Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ENCODES a protein that exhibits beta-catenin binding (ortholog); protein phosphorylated amino acid binding (ortholog); ubiquitin ligase activator activity (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); mammary gland epithelial cell proliferation (ortholog); negative regulation of smoothened signaling pathway (ortholog); PARTICIPATES IN Hedgehog signaling pathway; nuclear factor kappa B signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955485 8724375 8846647 - 102026749 AGCD01058727;AGCD01058728;GBCB01021435;XM_005403874;XM_005403876;XM_005403877;XM_013504108;XM_013504109 XP_005403931;XP_005403933;XP_005403934;XP_013359562;XP_013359563 MODEL 8781482 protein-coding Ddx55 DEAD-box helicase 55 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); large ribosomal subunit rRNA binding (ortholog); INVOLVED IN maturation of LSU-rRNA (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955482 5389195 5401885 - 102015724 AGCD01057326;GBCB01073404;XM_005403028;XM_013503550;XR_263832 XP_005403085;XP_013359004 MODEL 8791456 pseudo LOC102024554 integrator complex subunit 10 pseudogene NW_004955470 2171427 2172046 - 102024554 AGCD01052673 MODEL 8900111 ncrna LOC102014723 uncharacterized LOC102014723 NW_004955448 6397674 6401149 - 102014723 AGCD01041391;GBCB01076293;XR_262460 MODEL 8907517 protein-coding Cr2 complement C3d receptor 2 ENCODES a protein that exhibits complement binding (ortholog); complement receptor activity (ortholog); DNA binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell differentiation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH common variable immunodeficiency (ortholog); common variable immunodeficiency 2 (ortholog); common variable immunodeficiency 7 (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955406 42877041 42910970 + 102004453 AGCD01006720;GBBH01005578;XM_005375433 XP_005375490 MODEL 8915463 pseudo LOC102011206 isochorismatase domain-containing protein 1 pseudogene NW_004955485 129742 131023 + 102011206 AGCD01058442;XM_005403914 MODEL 8897458 ncrna LOC102020697 uncharacterized LOC102020697 NW_004955432 13281054 13321889 + 102020697 AGCD01031009;AGCD01031010;GBDF01146222;XR_001234643;XR_261526 MODEL 39134377 misc_rna 7SK 7SK RNA 8821152 pseudo LOC102010443 calnexin pseudogene NW_004955405 3150890 3152245 - 102010443 AGCD01004631 MODEL 8837464 protein-coding Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 ENCODES a protein that exhibits acetyltransferase activity (ortholog); L-lysine N-acetyltransferase activity, acting on acetyl phosphate as donor (ortholog); INVOLVED IN chromosome segregation (ortholog); double-strand break repair (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Juberg-Hayward Syndrome (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome (ortholog) NW_004955403 50306726 50328015 + 102008172 AGCD01002964;AGCD01002965;GBDF01190888;XM_005373754;XM_013514290 XP_005373811;XP_013369744 MODEL 8761390 protein-coding LOC102011647 olfactory receptor 52B2-like NW_004955414 21925278 21926526 - 102011647 AGCD01015437;XM_013511699 XP_013367153 MODEL 8843888 pseudo LOC102012843 T-complex protein 1 subunit alpha pseudogene NW_004955466 3144704 3150696 - 102012843 AGCD01050787 MODEL 8810417 ncrna LOC102008204 uncharacterized LOC102008204 NW_004955412 4776167 4820984 - 102008204 AGCD01012604;AGCD01012605;AGCD01012606;GBDF01156686;XR_001232850;XR_001232851;XR_259970;XR_259971 MODEL 8984999 protein-coding Dsc2 desmocollin 2 INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cardiac muscle cell-cardiac muscle cell adhesion (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN adherens junction (ortholog); cytoplasmic vesicle (ortholog); desmosome (ortholog) NW_004955402 18465631 18496948 - 102023766 AGCD01000532;AGCD01000533;GBBH01073549;GBDJ01228129;XM_005373159 XP_005373216 MODEL 39132068 rrna 5S_rRNA 5S ribosomal RNA 8904983 protein-coding LOC102007821 N-formyl peptide receptor 2 NW_004955558 780076 787914 - 102007821 AGCD01073389;AGCD01073390;GBDI01325712;XM_005412670;XM_013508870;XM_013508871 XP_005412727;XP_013364324;XP_013364325 MODEL 9019866 pseudo LOC102009737 nucleophosmin pseudogene NW_004955503 3206385 3225585 - 102009737 AGCD01064619 MODEL 9064825 ncrna LOC102021100 uncharacterized LOC102021100 NW_004955408 24151253 24158010 + 102021100 AGCD01008596;GBCB01047828;XR_001232404;XR_001232405;XR_259708 MODEL 8836957 protein-coding LOC102017730 UPF0577 protein KIAA1324-like homolog NW_004955621 163161 230801 + 102017730 AGCD01077376;AGCD01077377;GBDF01190085;GBDK01420995;XM_013510156 XP_013365610 MODEL 9008903 pseudo LOC102019330 synphilin-1-like NW_004955441 17320061 17322072 + 102019330 AGCD01037288 MODEL 8767094 protein-coding LOC102016583 olfactory receptor 51D1 NW_004955414 20229290 20230264 + 102016583 AGCD01015365;XM_013511717 XP_013367171 MODEL 8702502 ncrna LOC102015849 uncharacterized LOC102015849 NW_004955419 26437701 26446195 - 102015849 AGCD01020409;GBDF01144301;XR_260658 MODEL 39131866 rrna 5S_rRNA 5S ribosomal RNA 9036180 protein-coding Ilkap ILK associated serine/threonine phosphatase ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); regulation of nuclear cell cycle DNA replication (ortholog); PARTICIPATES IN integrin mediated signaling pathway NW_004955542 2391432 2407559 + 102015769 AGCD01071522;GBCQ01094302;GBDF01124379;XM_013508014 XP_013363468 MODEL 9063906 pseudo LOC102014727 enkurin pseudogene NW_004955402 6473949 6526219 - 102014727 AGCD01000159;AGCD01000160 MODEL 8985018 protein-coding Jmjd1c jumonji domain containing 1C ENCODES a protein that exhibits histone H3K9 demethylase activity (ortholog); protein demethylase activity (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); lipid biosynthetic process (ortholog); maintenance of cell number (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955425 16343314 16552552 - 102024136 AGCD01025600;AGCD01025601;AGCD01025602;AGCD01025603;AGCD01025604;AGCD01025605;AGCD01025606;AGCD01025607;AGCD01025608;AGCD01025609;AGCD01025610;GBCE01003019;XM_013514771 XP_013370225 MODEL 10143383 pseudo LOC106149971 spindle and kinetochore-associated protein 3 pseudogene NW_004955458 4249312 4249690 - 106149971 AGCD01047394 MODEL 8702358 protein-coding LOC102013611 olfactory receptor 14K1-like NW_004955418 30363345 30372168 + 102013611 AGCD01019514;AGCD01019515;XM_013512882 XP_013368336 MODEL 8749563 protein-coding Dazl deleted in azoospermia like ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR binding (ortholog); translation activator activity (ortholog); INVOLVED IN female meiosis II (ortholog); germ cell development (ortholog); oocyte maturation (ortholog); ASSOCIATED WITH Testicular Germ Cell Tumor (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955430 8869419 8880782 - 102005622 AGCD01029396;GBDF01043369;XM_013515564 XP_013371018 MODEL 39134070 misc_rna 7SK 7SK RNA 8728094 protein-coding Hspb7 heat shock protein family B (small) member 7 ENCODES a protein that exhibits filamin binding (ortholog); ASSOCIATED WITH Moebius syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955527 2219462 2222824 + 102006277 AGCD01069425;GBCB01004969;XM_005409852 XP_005409909 MODEL 8790654 protein-coding Fcrl4 Fc receptor like 4 ASSOCIATED WITH Hydrops Fetalis (ortholog); FOUND IN cell surface (ortholog) NW_004955468 9478180 9503127 - 102016043 AGCD01052047;GBDK01219188;XM_005400119;XM_013522502;XM_013522504;XM_013522505;XM_013522506 XP_005400176;XP_013377956;XP_013377958;XP_013377959;XP_013377960 MODEL 8802218 protein-coding Cisd3 CDGSH iron sulfur domain 3 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); metal ion binding (ortholog); INVOLVED IN protein maturation (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 13814679 13817334 + 102018248 AGCD01043506;GBDJ01073229;XM_005394278 XP_005394335 MODEL 8954481 protein-coding Kcnn3 potassium calcium-activated channel subfamily N member 3 ENCODES a protein that exhibits calmodulin binding (ortholog); inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; schizophrenia pathway; ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); paranoid schizophrenia (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); filopodium (ortholog) NW_004955545 1212240 1374189 - 102014609 AGCD01071848;AGCD01071849;AGCD01071850;AGCD01071851;GBDJ01278250;XM_005411527;XM_013508360;XM_013508361;XR_001232197 XP_005411584;XP_013363814;XP_013363815 MODEL 10073913 protein-coding Ankrd61 ankyrin repeat domain 61 FOUND IN nucleoplasm (ortholog) NW_004955460 13744482 13748863 - 106149991 AGCD01048722;GBDF01043667;XM_013521109 XP_013376563 MODEL 8762799 protein-coding LOC102008562 carboxylesterase 1D-like NW_004955433 13405185 13440775 - 102008562 AGCD01031690;GBDJ01424046;XM_005388329;XM_005388330 XP_005388386;XP_005388387 MODEL 8840232 ncrna LOC102021851 uncharacterized LOC102021851 NW_004955457 14849296 14857146 - 102021851 AGCD01047085;GBDJ01370680;XR_262954 MODEL 9065848 protein-coding Cstl1 cystatin like 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); INVOLVED IN signaling receptor ligand precursor processing (ortholog) NW_004955415 30438013 30441845 + 102005133 AGCD01016664;GBDF01084259;XM_005380970 XP_005381027 MODEL 8914120 protein-coding LOC102012056 basic proline-rich protein-like NW_004955406 37370333 37389779 + 102012056 AGCD01006576;GBDF01003978;XM_005375168;XR_001236862 XP_005375225 MODEL 8860297 ncrna LOC102020334 uncharacterized LOC102020334 NW_004955478 1118663 1128148 + 102020334 AGCD01055756;GBCE01092361;XR_263684 MODEL 9041354 protein-coding Dsc3 desmocollin 3 ENCODES a protein that exhibits gamma-catenin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Hypotrichosis and Recurrent Skin Vesicles (ortholog); intellectual disability (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); desmosome (ortholog) NW_004955402 18401065 18439827 - 102023417 AGCD01000531;GBBH01155200;GBCE01024966;XM_013506482;XM_013506510 XP_013361936;XP_013361964 MODEL 8825194 protein-coding Eif3e eukaryotic translation initiation factor 3 subunit E ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of translation (ortholog); translational initiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; translation initiation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) NW_004955417 30823555 30858975 - 102029513 AGCD01018630;AGCD01018631;AGCD01018632;AGCD01018633;GBCQ01034702;XM_005381967 XP_005382024 MODEL 8711088 protein-coding LOC102009319 HLA class II histocompatibility antigen, DRB1-1 beta chain-like NW_004955437 1228243 1262090 - 102009319 AGCD01034197;AGCD01034198;GBDK01061271;XM_013517040;XM_013517041 XP_013372494;XP_013372495 MODEL 8717792 protein-coding Dipk2a divergent protein kinase domain 2A INVOLVED IN cardiac muscle cell proliferation (ortholog); negative regulation of smooth muscle cell apoptotic process (ortholog); positive regulation of protein kinase C activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); extracellular region (ortholog) NW_004955508 1954600 1975842 - 102008647 AGCD01065777;GBCE01030452;XM_005407727 XP_005407784 MODEL 8971942 protein-coding Entrep2 endosomal transmembrane epsin interactor 2 NW_004955416 29103925 29389149 + 102020337 AGCD01017645;AGCD01017646;AGCD01017647;AGCD01017648;AGCD01017649;AGCD01017650;AGCD01017651;AGCD01017652;AGCD01017653;AGCD01017654;AGCD01017655;GBDF01273920;XM_013512428 XP_013367882 MODEL 39134200 misc_rna 7SK 7SK RNA 8870487 ncrna LOC102016584 uncharacterized LOC102016584 NW_004955414 28426503 28445509 + 102016584 AGCD01015682;GBBH01008326;XR_001233062;XR_260205 MODEL 8742025 protein-coding LOC102005691 NKG2-D type II integral membrane protein ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); negative regulation of GTPase activity (ortholog); negative regulation of natural killer cell chemotaxis (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955413 7489158 7503014 + 102005691 AGCD01013822;GBDK01000444;XM_013511691;XM_013511692;XR_260066 XP_013367145;XP_013367146 MODEL 8826660 ncrna LOC102014340 uncharacterized LOC102014340 NW_004955413 4876560 4879730 - 102014340 AGCD01013636;GBDF01074376;XR_260060 MODEL 8755348 protein-coding Igf1r insulin like growth factor 1 receptor ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); identical protein binding (ortholog); insulin binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta clearance (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adrenocortical carcinoma (ortholog); alcoholic neuropathy (ortholog); FOUND IN alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog); axon (ortholog); caveola (ortholog) NW_004955416 26101090 26382660 - 102029077 AGCD01017594;AGCD01017595;GBDJ01230004;XM_005381615;XM_013512515 XP_005381672;XP_013367969 MODEL 8910354 ncrna LOC102008951 uncharacterized LOC102008951 NW_004955420 29155972 29159064 - 102008951 AGCD01021493;GBCB01016080;XR_260771 MODEL 8887155 pseudo LOC102013961 F-box-like/WD repeat-containing protein TBL1XR1 pseudogene NW_004955431 4870896 4884687 + 102013961 AGCD01030014 MODEL 39132070 rrna 5S_rRNA 5S ribosomal RNA 8820722 protein-coding Aagab alpha and gamma adaptin binding protein ASSOCIATED WITH palmoplantar keratosis (ortholog); punctate palmoplantar keratoderma type I (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955450 8694829 8742816 + 102025069 AGCD01042575;AGCD01042576;GBCQ01094289;XM_005393690 XP_005393747 MODEL 39134071 misc_rna 7SK 7SK RNA 8739542 protein-coding Cish cytokine inducible SH2 containing protein INVOLVED IN cytokine-mediated signaling pathway (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-2 signaling pathway; interleukin-3 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Bacteremia (ortholog); malaria (ortholog); FOUND IN plasma membrane (ortholog) NW_004955532 2380380 2386000 - 102014486 AGCD01070225;AGCD01070226;GBDF01280930;XM_005410305;XM_013507639 XP_005410362;XP_013363093 MODEL 8856226 ncrna LOC102016212 uncharacterized LOC102016212 NW_004955402 7391497 7396480 - 102016212 AGCD01000173;GBDK01265607;XR_001235803;XR_001235805;XR_259042 MODEL 8954322 protein-coding Bub1 BUB1 mitotic checkpoint serine/threonine kinase ENCODES a protein that exhibits histone H2A kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) NW_004955470 3152798 3190185 + 102007217 AGCD01052692;AGCD01052693;GBDF01156049;XM_005400628 XP_005400685 MODEL 9017773 ncrna LOC102020698 uncharacterized LOC102020698 NW_004955433 9297942 9300316 + 102020698 AGCD01031611;GBDF01015799;XR_261572;XR_261573 MODEL 8820599 pseudo LOC102021101 keratin, type I cytoskeletal 19 pseudogene NW_004955408 14199718 14201846 - 102021101 AGCD01008387 MODEL 8796911 protein-coding LOC102015452 chromosome unknown open reading frame, human C14orf132 NW_004955438 16628879 16662868 - 102015452 AGCD01035422;GBCE01114226;XM_013517248 XP_013372702 MODEL 8824113 pseudo LOC102011208 40S ribosomal protein S12 pseudogene NW_004955489 506441 506882 - 102011208 AGCD01059807 MODEL 8906918 protein-coding LOC102005692 myosin-8 NW_004955467 6760351 6787249 + 102005692 AGCD01051422;AGCD01051423;GBBH01072423;GBCB01079090;XM_013522113 XP_013377567 MODEL 9066476 protein-coding Acbd7 acyl-CoA binding domain containing 7 INVOLVED IN energy homeostasis (ortholog); G protein-coupled receptor signaling pathway (ortholog); gene expression (ortholog) NW_004955429 19367352 19372358 + 102004839 AGCD01028949;AGCD01028950;GBDF01002478;XM_005387146;XM_005387147 XP_005387203;XP_005387204 MODEL 8948074 ncrna LOC102010445 uncharacterized LOC102010445 NW_004955406 13995073 13998877 - 102010445 AGCD01005956;GBDJ01024864;XR_001236437 MODEL 39131867 rrna 5S_rRNA 5S ribosomal RNA 8754840 protein-coding Esd esterase D ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Hypoxia (ortholog); osteoarthritis (ortholog); FOUND IN cytosol (ortholog) NW_004955431 524491 551871 - 102010084 AGCD01029869;AGCD01029870;GBBH01065118;GBCB01022499;XM_013515897 XP_013371351 MODEL 8759906 protein-coding LOC102019331 olfactory receptor 11H4 NW_004955550 1024441 1025403 + 102019331 AGCD01072541;XM_005412042 XP_005412099 MODEL 8963506 protein-coding CUNH1orf54 chromosome unknown C1orf54 homolog NW_004955413 496136 505911 - 102016795 AGCD01013472;GBDK01076216;XM_005378692 XP_005378749 MODEL 8703205 protein-coding Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of protein localization to nucleus (ortholog); negative regulation of tumor necrosis factor production (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955437 2697998 2769998 - 102018326 AGCD01034284;AGCD01034285;GBDF01007654;GBDK01126877;XM_005389532 XP_005389589 MODEL 8956094 protein-coding Jmjd4 jumonji domain containing 4 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); peptidyl-lysine 4-dioxygenase activity (ortholog); INVOLVED IN positive regulation of translational termination (ortholog); protein hydroxylation (ortholog); FOUND IN cytoplasm (ortholog) NW_004955581 525545 530589 + 102024068 AGCD01075676;GBCE01136389;GBDK01231362;XM_013509742;XM_013509743 XP_013365196;XP_013365197 MODEL 8945148 ncrna LOC102013615 uncharacterized LOC102013615 NW_004955420 27425185 27435635 + 102013615 AGCD01021453;GBDF01251108;XR_260762 MODEL 10275300 ncrna LOC106149972 uncharacterized LOC106149972 NW_004955458 4265470 4266042 + 106149972 AGCD01047395;GBDF01279215;XR_001236472 MODEL 8799243 protein-coding Dbf4 DBF4-CDC7 kinase regulatory subunit FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955432 5245039 5266104 + 102017371 AGCD01030770;GBDF01080724;XM_005387976;XM_005387977;XM_013516044 XP_005388033;XP_005388034;XP_013371498 MODEL 8868178 protein-coding Kcnn4 potassium calcium-activated channel subfamily N member 4 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); calmodulin binding (ortholog); intermediate conductance calcium-activated potassium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cardiac muscle hypertrophy (ortholog); cell volume homeostasis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Acute Subdural Hematoma (ortholog); angiosarcoma (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); neuronal cell body (ortholog) NW_004955555 1493600 1509113 - 102021712 AGCD01073083;AGCD01073084;GBDI01261438;XM_005412459 XP_005412516 MODEL 8819553 protein-coding Crabp1 cellular retinoic acid binding protein 1 ENCODES a protein that exhibits retinoic acid binding (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); Keloid (ortholog); Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955450 810206 817011 + 102009781 AGCD01042344;GBCE01007045;XM_005393447 XP_005393504 MODEL 8724016 ncrna LOC102012057 uncharacterized LOC102012057 NW_004955406 39330833 39331560 + 102012057 AGCD01006626;GBDK01343682;XR_259526 MODEL 8716895 protein-coding LOC102017731 arylamine N-acetyltransferase 2-like NW_004955403 42305517 42311914 + 102017731 AGCD01002751;GBDJ01116357;XM_005373603 XP_005373660 MODEL 9024939 protein-coding LOC102012844 polycystic kidney disease protein 1-like 2 NW_004955413 408570 412526 + 102012844 AGCD01013464;GBDJ01203527;XM_005378678;XM_013511472 XP_005378735;XP_013366926 MODEL 8714128 pseudo LOC102015852 small ubiquitin-related modifier 1 pseudogene NW_004955486 515925 528616 + 102015852 AGCD01058860;XM_005404296 MODEL 8833922 ncrna LOC102014729 uncharacterized LOC102014729 NW_004955403 21996758 22009765 - 102014729 AGCD01002212;XR_259192 MODEL 8767305 protein-coding Dscam DS cell adhesion molecule ENCODES a protein that exhibits netrin receptor binding (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN axon guidance (ortholog); dendrite morphogenesis (ortholog); dendrite self-avoidance (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); esophageal atresia (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); growth cone (ortholog) NW_004955407 39985501 40473330 - 102021421 AGCD01007838;AGCD01007839;AGCD01007840;AGCD01007841;AGCD01007842;AGCD01007843;GBDF01217422;XM_005375986 XP_005376043 MODEL 8851553 pseudo LOC102009321 MORC family CW-type zinc finger protein 2A pseudogene NW_004955438 6361423 6366279 + 102009321 AGCD01035101 MODEL 8711849 protein-coding LOC102003870 eotaxin NW_004955481 9017930 9020436 + 102003870 AGCD01057092;GBDF01030595;XM_005402838 XP_005402895 MODEL 9019350 protein-coding LOC102011211 cationic trypsin-3-like NW_004955494 1248108 1252850 + 102011211 AGCD01061393;XM_005405394 XP_005405451 MODEL 8945650 protein-coding Accs 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) ENCODES a protein that exhibits 1-aminocyclopropane-1-carboxylate synthase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog) NW_004955422 3442365 3539288 - 102008429 AGCD01022511;AGCD01022512;AGCD01022513;AGCD01022514;AGCD01022515;AGCD01022516;AGCD01022517;AGCD01022518;AGCD01022519;AGCD01022520;AGCD01022521;AGCD01022522;AGCD01022523;GBDF01053397;XM_013513829 XP_013369283 MODEL 8745538 pseudo LOC102013247 transmembrane protein 216-like NW_004955453 14243472 14246662 + 102013247 AGCD01044860 MODEL 9019548 protein-coding Grid1 glutamate ionotropic receptor delta type subunit 1 ENCODES a protein that exhibits G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential (ortholog); GABA receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of synaptic plasticity (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neurodevelopmental Disorders (ortholog); prostate cancer (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955510 4902908 5563924 - 102021467 AGCD01066273;AGCD01066274;AGCD01066275;AGCD01066276;AGCD01066277;AGCD01066278;AGCD01066279;AGCD01066280;AGCD01066281;AGCD01066282;GBCB01008231;XM_013506310 XP_013361764 MODEL 9017322 protein-coding LOC102024556 uncharacterized LOC102024556 NW_004955414 29948314 29960179 + 102024556 AGCD01015720;AGCD01015721;GBDF01111853;XM_013511743 XP_013367197 MODEL 8946942 pseudo LOC102008563 60S ribosomal protein L39-like NW_004955520 1054945 1055417 - 102008563 AGCD01068042 MODEL 8873745 protein-coding Hspb8 heat shock protein family B (small) member 8 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); positive regulation of aggrephagy (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease axonal type 2L (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955455 12290884 12304588 - 102017426 AGCD01046033;GBDJ01000874;XM_005396529 XP_005396586 MODEL 8900256 protein-coding Ddx56 DEAD-box helicase 56 ENCODES a protein that exhibits protein sequestering activity (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN defense response to virus (ortholog); host-mediated perturbation of viral RNA genome replication (ortholog); negative regulation of type I interferon production (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955456 7505260 7513225 + 102019029 AGCD01046419;GBDF01081755;XM_005396662 XP_005396719 MODEL 8974341 ncrna LOC102020335 uncharacterized LOC102020335 NW_004955416 21327879 21329980 + 102020335 AGCD01017503;GBDF01253604;XR_260408 MODEL 8876679 protein-coding Ankrd63 ankyrin repeat domain 63 NW_004955416 7212413 7216526 - 102017122 AGCD01016970;GBDF01016126;XM_005381225;XM_005381226;XM_005381227;XM_013512598 XP_005381282;XP_005381283;XP_005381284;XP_013368052 MODEL 39132120 rrna 5S_rRNA 5S ribosomal RNA 8877950 protein-coding Ilvbl ilvB acetolactate synthase like INVOLVED IN fatty acid alpha-oxidation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955495 8130875 8140152 + 102011677 AGCD01062185;GBDI01187952;XM_005406091;XM_005406093;XM_005406094 XP_005406148;XP_005406150;XP_005406151 MODEL 8931135 protein-coding LOC102011649 NADH-cytochrome b5 reductase 2 ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955414 23421387 23427883 - 102011649 AGCD01015497;GBCE01040815;GBDJ01193166;XM_013511703 XP_013367157 MODEL 8970853 protein-coding Eif3f eukaryotic translation initiation factor 3 subunit F ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); identical protein binding (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN IRES-dependent viral translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 67 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog); synapse (ortholog) NW_004955414 23805406 23812776 + 102013924 AGCD01015527;GBDI01018381;XM_005380208 XP_005380265 MODEL 8753406 protein-coding LOC102008206 olfactory receptor 2B6-like NW_004955465 13463709 13464717 + 102008206 AGCD01050609;XM_005398954 XP_005399011 MODEL 8959018 protein-coding Dipk2b divergent protein kinase domain 2B ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); X-Linked Intellectual Developmental Disorders (ortholog) NW_004955516 3041112 3081740 + 102029321 AGCD01067480;AGCD01067481;GBDK01237416;XM_005408985;XM_013506933 XP_005409042;XP_013362387 MODEL 8932804 protein-coding LOC102016585 olfactory receptor 502-like NW_004955414 23558286 23559251 + 102016585 AGCD01015501;XM_005380520 XP_005380577 MODEL 8790185 protein-coding Entrep3 endosomal transmembrane epsin interactor 3 ENCODES a protein that exhibits WW domain binding (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955545 1703860 1710120 - 102023398 AGCD01071868;AGCD01071869;GBBH01067051;GBDK01395802;XM_013508339;XM_013508340 XP_013363793;XP_013363794 MODEL 8833726 ncrna LOC102010449 uncharacterized LOC102010449 NW_004955408 9399013 9409596 + 102010449 AGCD01008249;GBDF01235295;XR_259676 MODEL 9010515 protein-coding Fcrl5 Fc receptor like 5 ENCODES a protein that exhibits coreceptor activity (ortholog); INVOLVED IN B cell activation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of release of sequestered calcium ion into cytosol (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); receptor complex (ortholog) NW_004955468 9434654 9464907 - 102016579 AGCD01052047;GBBH01226026;XM_005400121;XM_005400122;XM_005400123 XP_005400178;XP_005400179;XP_005400180 MODEL 8739413 protein-coding CUNH1orf87 chromosome unknown C1orf87 homolog FOUND IN axoneme (ortholog); cilium (ortholog) NW_004955423 28893115 28989576 + 102009196 AGCD01024158;AGCD01024159;AGCD01024160;AGCD01024161;AGCD01024162;XM_013514369 XP_013369823 MODEL 8808503 protein-coding LOC102021855 olfactory receptor 6C3-like NW_004955458 2816076 2817020 - 102021855 AGCD01047245;XM_005397502 XP_005397559 MODEL 8938864 protein-coding LOC102013249 short-chain dehydrogenase/reductase family 16C member 6-like NW_004955454 15372653 15401544 - 102013249 AGCD01045493;GBCC01001125;XM_005396086;XM_005396087 XP_005396143;XP_005396144 MODEL 8853612 protein-coding Aak1 AP2 associated kinase 1 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); Notch binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); presynaptic endocytosis (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH tooth agenesis (ortholog); FOUND IN calyx of Held (ortholog); cell leading edge (ortholog); clathrin complex (ortholog) NW_004955424 15480783 15640471 + 102014583 AGCD01024717;AGCD01024718;AGCD01024719;GBDF01234309;XM_005385640;XM_005385641;XM_005385642;XM_005385643;XM_005385644;XM_005385645;XM_005385646;XM_005385647;XM_013514694;XM_013514695 XP_005385697;XP_005385698;XP_005385699;XP_005385700;XP_005385701;XP_005385702;XP_005385703;XP_005385704;XP_013370148;XP_013370149 MODEL 8735148 ncrna LOC102016214 uncharacterized LOC102016214 NW_004955449 11070441 11094994 - 102016214 AGCD01042083;GBDF01178339;XR_262498 MODEL 8781641 pseudo LOC102020700 eukaryotic peptide chain release factor subunit 1-like NW_004955521 621318 636011 - 102020700 AGCD01068140 MODEL 8854546 protein-coding Cit citron rho-interacting serine/threonine kinase ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN dendrite development (ortholog); G2/M transition of mitotic cell cycle (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH Ataxia (ortholog); autosomal recessive primary microcephaly (ortholog); COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955455 11705015 11871762 + 102015283 AGCD01046018;AGCD01046019;AGCD01046020;AGCD01046021;GBDF01248560;XM_005396520;XM_005396521;XM_005396522;XM_005396523;XM_013520469;XM_013520470;XM_013520471 XP_005396577;XP_005396578;XP_005396579;XP_005396580;XP_013375923;XP_013375924;XP_013375925 MODEL 8776416 pseudo LOC102015454 U6 snRNA-associated Sm-like protein LSm3 pseudogene NW_004955440 3420455 3423022 - 102015454 AGCD01036242 MODEL 8824533 protein-coding Ddx59 DEAD-box helicase 59 ASSOCIATED WITH genetic disease (ortholog); orofaciodigital syndrome V (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955406 36861420 36885746 - 102005223 AGCD01006569;AGCD01006570;GBBH01007328;XM_005375143;XM_013522046 XP_005375200;XP_013377500 MODEL 39131868 rrna 5S_rRNA 5S ribosomal RNA 9003855 ncrna LOC102009738 uncharacterized LOC102009738 NW_004955504 990784 1006063 + 102009738 AGCD01064834;GBDI01386594;XR_001231555;XR_001231556;XR_001231557;XR_001231558;XR_001231559;XR_001231560;XR_001231561;XR_001231562;XR_001231563;XR_001231564;XR_001231565;XR_001231566;XR_001231567;XR_001231568;XR_264274;XR_264276 MODEL 8717046 protein-coding Eif3g eukaryotic translation initiation factor 3 subunit G ENCODES a protein that exhibits RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); viral translational termination-reinitiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Cataplexy and Narcolepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) NW_004955495 1452806 1456834 - 102027654 AGCD01061693;GBDF01000179;XM_005405580 XP_005405637 MODEL 8991392 protein-coding Esf1 ESF1 nucleolar pre-rRNA processing protein NW_004955415 23156521 23221027 - 102003229 AGCD01016551;AGCD01016552;GBCQ01150807;XM_005380886 XP_005380943 MODEL 8797466 protein-coding Igf2 insulin like growth factor 2 ENCODES a protein that exhibits growth factor activity (ortholog); insulin receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); cellular response to mechanical stimulus (ortholog); embryonic placenta development (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); adrenocortical carcinoma (ortholog); alcohol use disorder (ortholog); FOUND IN extracellular space (ortholog) NW_004955422 13880525 13907963 - 102005482 AGCD01022840;AGCD01022841;GBDK01090861;XM_005384193;XM_013514303;XM_013514304;XM_013514305 XP_005384250;XP_013369757;XP_013369758;XP_013369759 MODEL 8802581 protein-coding Cstpp1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of protein complex stability (ortholog); FOUND IN centriolar satellite (ortholog) NW_004955422 1005941 1179128 - 102029188 AGCD01022444;AGCD01022445;AGCD01022446;AGCD01022447;GBDJ01371432;XM_005384000;XM_005384001;XM_013513931;XM_013513932;XM_013513933;XM_013513934 XP_005384057;XP_005384058;XP_013369385;XP_013369386;XP_013369387;XP_013369388 MODEL 8938760 protein-coding LOC102008207 glutathione peroxidase 6 NW_004955465 13770938 13774725 - 102008207 AGCD01050623;GBBH01092321;GBDJ01389285;XM_013521797 XP_013377251 MODEL 8787894 pseudo LOC102013965 prostaglandin reductase 1 pseudogene NW_004955530 3388161 3388865 - 102013965 AGCD01069951 MODEL 8849818 ncrna LOC102009325 uncharacterized LOC102009325 NW_004955442 15855701 15859607 - 102009325 AGCD01037883;GBDF01303907;XR_262159 MODEL 9043098 pseudo LOC102011212 rRNA-processing protein FCF1 homolog pseudogene NW_004955494 5808071 5843724 - 102011212 AGCD01061526 MODEL 10124296 ncrna LOC106149973 uncharacterized LOC106149973 NW_004955458 10983507 10997983 - 106149973 AGCD01047711;XR_001236473 MODEL 8963615 protein-coding Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3R2 demethylase activity (ortholog); histone H4R3 demethylase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); blood vessel development (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); melanoma (ortholog); Mesothelioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955506 5577735 5588307 + 102019089 AGCD01065374;GBDF01089437;XM_005407413;XM_005407414;XM_005407415;XM_013506024;XM_013506025 XP_005407470;XP_005407471;XP_005407472;XP_013361478;XP_013361479 MODEL 39133937 misc_rna 7SK 7SK RNA 8777889 protein-coding LOC102021109 olfactory receptor 149-like NW_004955412 24681324 24682255 + 102021109 AGCD01013121;XM_013510977 XP_013366431 MODEL 8835501 protein-coding Hspb9 heat shock protein family B (small) member 9 ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955451 16198747 16199566 + 102013465 AGCD01043659;AGCD01043660;GBCQ01038139;GBDK01139365;XM_005394441 XP_005394498 MODEL 10275255 protein-coding Ankrd65 ankyrin repeat domain 65 NW_004955486 9383502 9384519 + 106146596 AGCD01059179;GBDI01264717;GBDI01264722;XM_013504148 XP_013359602 MODEL 8879317 pseudo LOC102020338 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform pseudogene NW_004955479 519760 520819 - 102020338 AGCD01056201;XR_263740 MODEL 39132123 rrna 5S_rRNA 5S ribosomal RNA 8951590 protein-coding LOC102017735 cytochrome c, somatic-like NW_004955404 12414422 12414848 + 102017735 AGCD01003461;XM_005374082 XP_005374139 MODEL 8787191 ncrna LOC102014730 uncharacterized LOC102014730 NW_004955451 6257017 6259471 - 102014730 AGCD01043200;GBDF01112399;XR_262585 MODEL 8986160 protein-coding LOC102012845 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10861527 10905757 - 102012845 AGCD01051587;GBCE01022349;XM_013522159;XM_013522160 XP_013377613;XP_013377614 MODEL 39133938 misc_rna 7SK 7SK RNA 8754200 protein-coding LOC102014341 apolipoprotein L2-like NW_004955413 22530496 22548924 - 102014341 AGCD01014302;AGCD01014303;GBBH01069604;XM_013511281 XP_013366735 MODEL 8801184 pseudo LOC102008958 AN1-type zinc finger protein 3-like NW_004955497 478857 481296 + 102008958 AGCD01062416 MODEL 8944768 ncrna LOC102019332 uncharacterized LOC102019332 NW_004955442 5088498 5127744 + 102019332 AGCD01037552;GBDF01212046;XR_262114 MODEL 8716878 pseudo LOC102016215 60S ribosomal protein L39 pseudogene NW_004955402 44397823 44398005 - 102016215 AGCD01001113;XM_005373008 MODEL 8732096 protein-coding Aamdc adipogenesis associated Mth938 domain containing INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of fat cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog) NW_004955414 14058445 14085652 - 102007882 AGCD01015141;GBCB01002051;XM_005379828;XM_005379829;XM_005379830;XM_005379831;XM_005379832;XM_005379833 XP_005379885;XP_005379886;XP_005379887;XP_005379888;XP_005379889;XP_005379890 MODEL 9013025 protein-coding Dscaml1 DS cell adhesion molecule like 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN brain development (ortholog); dendrite self-avoidance (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); prostate cancer (ortholog); FOUND IN cell surface (ortholog) NW_004955412 18708444 19022538 - 102029837 AGCD01012945;GBBH01226087;XM_005378218 XP_005378275 MODEL 8860751 protein-coding LOC102010451 olfactory receptor 1361-like NW_004955408 1580644 1581941 + 102010451 AGCD01007965;XM_005376561 XP_005376618 MODEL 8861419 protein-coding Fcrl6 Fc receptor like 6 ENCODES a protein that exhibits MHC class II protein binding (ortholog); phosphatase binding (ortholog); protein phosphatase binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955468 11581225 11617268 + 102007878 AGCD01052135;AGCD01052136;GBDK01386476;XM_005400174 XP_005400231 MODEL 8976831 ncrna LOC102008564 uncharacterized LOC102008564 NW_004955523 46481 51442 + 102008564 AGCD01068431;GBBH01049104;XR_001231942;XR_264632 MODEL 8965953 protein-coding Kcnq1 potassium voltage-gated channel subfamily Q member 1 ENCODES a protein that exhibits calmodulin binding (ortholog); delayed rectifier potassium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); atrial cardiac muscle cell action potential (ortholog); auditory receptor cell development (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Achlorhydria (ortholog); adenocarcinoma (ortholog); atrial fibrillation (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral part of cell (ortholog) NW_004955422 14212563 14544556 + 102009727 AGCD01022855;AGCD01022856;AGCD01022857;AGCD01022858;AGCD01022859;GBBH01026666;XM_005384206;XM_013514208;XM_013514209 XP_005384263;XP_013369662;XP_013369663 MODEL 9001101 protein-coding Esm1 endothelial cell specific molecule 1 ENCODES a protein that exhibits hepatocyte growth factor receptor binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of hepatocyte growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Liver Neoplasms (ortholog) NW_004955446 12644220 12665351 + 102021812 AGCD01040239;GBBH01086228;XM_005392712 XP_005392769 MODEL 8748778 pseudo LOC102007822 60S ribosomal protein L27a pseudogene NW_004955442 13747235 13747833 + 102007822 AGCD01037787 MODEL 8929461 protein-coding Bub1b BUB1 mitotic checkpoint serine/threonine kinase B INVOLVED IN metaphase/anaphase transition of mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); protein localization to chromosome, centromeric region (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); cerebral palsy (ortholog); colon carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955416 7105302 7159121 + 102015008 AGCD01016963;AGCD01016964;AGCD01016965;AGCD01016966;GBDF01053678;XM_005381216;XM_005381217;XM_005381218;XM_013512666;XM_013512667 XP_005381273;XP_005381274;XP_005381275;XP_013368120;XP_013368121 MODEL 8749858 protein-coding CUNH20orf141 chromosome unknown C20orf141 homolog NW_004955415 13770300 13771257 + 102018282 AGCD01016268;GBDF01048459;XM_005380764 XP_005380821 MODEL 8887105 protein-coding LOC102012060 cytochrome c oxidase subunit 6A1, mitochondrial ASSOCIATED WITH Charcot-Marie-Tooth disease recessive intermediate D (ortholog); neuropathy (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955455 11201031 11203644 - 102012060 AGCD01045986;GBCQ01009037;XM_005396510 XP_005396567 MODEL 39134201 misc_rna 7SK 7SK RNA 8859532 ncrna LOC102015853 uncharacterized LOC102015853 NW_004955421 20885464 20907069 - 102015853 AGCD01022098;GBCE01066577;XR_001233827;XR_260798 MODEL 8888167 pseudo LOC102013252 ataxin-1-like NW_004955456 14143590 14145611 + 102013252 AGCD01046634 MODEL 8714078 ncrna LOC102011654 uncharacterized LOC102011654 NW_004955476 4365503 4385423 - 102011654 AGCD01055280;GBDI01309143;XR_001230807;XR_001230808;XR_001230809;XR_001230810 MODEL 9004875 protein-coding LOC102015455 olfactory receptor 13A1-like NW_004955546 2382212 2436072 + 102015455 AGCD01072089;AGCD01072090;AGCD01072091;AGCD01072092;XM_005411790;XM_013508369 XP_005411847;XP_013363823 MODEL 8738750 protein-coding Acd ACD shelterin complex subunit and telomerase recruitment factor ENCODES a protein that exhibits DNA polymerase binding (ortholog); protein-containing complex binding (ortholog); telomerase inhibitor activity (ortholog); INVOLVED IN embryonic limb morphogenesis (ortholog); establishment of protein localization to telomere (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH autosomal dominant dyskeratosis congenita 6 (ortholog); Autosomal Recessive Dyskeratosis Congenita 7 (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear body (ortholog); nuclear telomere cap complex (ortholog) NW_004955484 9022520 9025446 + 102026981 AGCD01058403;GBDJ01271407;XM_005403635 XP_005403692 MODEL 39131870 rrna 5S_rRNA 5S ribosomal RNA 8853779 protein-coding Ddx6 DEAD-box helicase 6 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); negative regulation of neuron differentiation (ortholog); negative regulation of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH genetic disease (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH IMPAIRED LANGUAGE AND DYSMORPHIC FACIES (ortholog); rheumatoid arthritis (ortholog); FOUND IN adherens junction (ortholog); chromatoid body (ortholog); concave side of sperm head (ortholog) NW_004955412 19854785 19889422 - 102018272 AGCD01012983;GBBH01089966;GBDK01239594;XM_013511147 XP_013366601 MODEL 8719343 protein-coding Grid2 glutamate ionotropic receptor delta type subunit 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN cerebellar granule cell differentiation (ortholog); excitatory postsynaptic potential (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 18 (ortholog); genetic disease (ortholog); GRID2-related spinocerebellar ataxia (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); ionotropic glutamate receptor complex (ortholog) NW_004955405 3291793 4411249 + 102014411 AGCD01004634;AGCD01004635;AGCD01004636;AGCD01004637;AGCD01004638;AGCD01004639;AGCD01004640;AGCD01004641;AGCD01004642;AGCD01004643;AGCD01004644;AGCD01004645;AGCD01004646;GBCE01036544;XM_005374673 XP_005374730 MODEL 8833280 protein-coding Eny2 ENY2 transcription and export complex 2 subunit ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); poly(A)+ mRNA export from nucleus (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN DUBm complex (ortholog); nuclear pore nuclear basket (ortholog); SAGA complex (ortholog) NW_004955417 16750563 16760839 + 102022081 AGCD01018273;GBDF01088991;XM_005381877;XM_005381878 XP_005381934;XP_005381935 MODEL 8899655 protein-coding Eif3h eukaryotic translation initiation factor 3 subunit H ENCODES a protein that exhibits metal-dependent deubiquitinase activity (ortholog); translation initiation factor activity (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); breast cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) NW_004955417 22757781 22846349 - 102029395 AGCD01018422;AGCD01018423;GBDI01006244;XM_005381895;XM_005381896 XP_005381952;XP_005381953 MODEL 8867656 protein-coding LOC102024557 olfactory receptor 1019-like NW_004955473 3548903 3549826 + 102024557 AGCD01053935;XM_005401294 XP_005401351 MODEL 8866682 protein-coding LOC102021856 small integral membrane protein 10-like protein 2A NW_004955460 13310462 13331180 + 102021856 AGCD01048680;XM_005397892 XP_005397949 MODEL 9038569 protein-coding Dbh dopamine beta-hydroxylase ENCODES a protein that exhibits copper ion binding (ortholog); dopamine beta-monooxygenase activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral response to ethanol (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Anorexia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); dendrite (ortholog) NW_004955513 2918085 2932481 + 102021158 AGCD01066892;GBDK01427732;XM_005408455 XP_005408512 MODEL 8897227 pseudo LOC102013970 dnaJ homolog subfamily A member 2 pseudogene NW_004955438 16349528 16350769 + 102013970 AGCD01035405 MODEL 10323072 protein-coding Ct55 cancer/testis antigen 55 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH X-linked spermatogenic failure 7 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) NW_004956648 483 703 - 106147686 AGCD01079949;GBDF01225515;XM_013510232 XP_013365686 MODEL 8782767 protein-coding Crabp2 cellular retinoic acid binding protein 2 ENCODES a protein that exhibits cyclin binding (ortholog); retinoic acid binding (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); positive regulation of collateral sprouting (ortholog); retinoic acid metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH methylmalonic acidemia (ortholog); Ovarian Neoplasms (ortholog); Recurrence (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955545 2777523 2782567 - 102007369 AGCD01071923;GBBH01033798;XM_005411695 XP_005411752 MODEL 9000065 pseudo LOC102005693 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955413 21622743 21623904 - 102005693 AGCD01014258 MODEL 10214263 ncrna LOC106149974 uncharacterized LOC106149974 NW_004955458 1828045 1847679 + 106149974 AGCD01047206;GBCQ01121701;XR_001236474 MODEL 8813963 protein-coding Immp1l inner mitochondrial membrane peptidase subunit 1 PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog) NW_004955476 9784838 9850076 - 102025906 AGCD01055397;AGCD01055398;AGCD01055399;AGCD01055400;GBCQ01044833;XM_005401775;XM_005401776;XM_005401778;XM_005401779;XM_005401780;XM_013502937 XP_005401832;XP_005401833;XP_005401835;XP_005401836;XP_005401837;XP_013358391 MODEL 8909860 ncrna LOC102020706 uncharacterized LOC102020706 NW_004955436 12393166 12395586 - 102020706 AGCD01033840;GBDF01251978;XR_001234971 MODEL 8824745 protein-coding LOC102013616 PRAME family member 12-like NW_004955486 324217 327218 + 102013616 AGCD01058836;XM_013504136 XP_013359590 MODEL 8930109 protein-coding Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); LBD domain binding (ortholog); INVOLVED IN brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); embryonic axis specification (ortholog); ASSOCIATED WITH Kidney Reperfusion Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955475 11722514 11725067 - 102013715 AGCD01055167;GBDF01263729;GBDK01278752;XM_005401687 XP_005401744 MODEL 8944457 pseudo LOC102003871 transcription and mRNA export factor ENY2 pseudogene NW_004955418 2196164 2198005 - 102003871 AGCD01018751;XM_005382119 MODEL 8743554 protein-coding Ankrd66 ankyrin repeat domain 66 NW_004955437 11578962 11589164 + 102008981 AGCD01034578;GBDJ01388364;XM_013517100 XP_013372554 MODEL 8918156 protein-coding Hspbap1 HSPB1 associated protein 1 NW_004955427 21931101 22004811 - 102012881 AGCD01027461;AGCD01027462;AGCD01027463;GBDK01393831;XM_005386520;XM_005386521 XP_005386577;XP_005386578 MODEL 39133939 misc_rna 7SK 7SK RNA 8884018 protein-coding Diras1 DIRAS family GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN positive regulation of MAP kinase activity (ortholog); ASSOCIATED WITH early myoclonic encephalopathy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955495 5002803 5005203 - 102017995 AGCD01061969;GBDJ01193820;XM_005405828 XP_005405885 MODEL 8789268 ncrna LOC102011218 uncharacterized LOC102011218 NW_004955424 20490173 20500552 + 102011218 AGCD01024856;AGCD01024857;AGCD01024858;GBCB01025533;XR_001234179;XR_261091 MODEL 8730539 protein-coding Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); dendrite arborization (ortholog); gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); colon adenoma (ortholog); Experimental Neoplasms (ortholog); FOUND IN axon (ortholog); CRD-mediated mRNA stability complex (ortholog); cytoplasm (ortholog) NW_004955451 12312715 12348663 - 102028366 AGCD01043385;AGCD01043386;GBDF01076205;XM_005394222;XM_005394223 XP_005394279;XP_005394280 MODEL 8789802 protein-coding Ddx60 DExD/H-box helicase 60 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); positive regulation of MDA-5 signaling pathway (ortholog); positive regulation of RIG-I signaling pathway (ortholog); ASSOCIATED WITH Human Influenza (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955403 37679939 37765074 + 102008809 AGCD01002574;GBCE01165728;XM_005373576;XM_013513440;XM_013513446;XM_013513451;XM_013513454 XP_005373633;XP_013368894;XP_013368900;XP_013368905;XP_013368908 MODEL 9060732 ncrna LOC102009328 uncharacterized LOC102009328 NW_004955558 871030 888543 + 102009328 AGCD01073396;AGCD01073397;AGCD01073398;AGCD01073399;GBDF01225099;XR_001232328;XR_001232329 MODEL 8998137 ncrna LOC102016588 uncharacterized LOC102016588 NW_004955415 26924885 26941355 - 102016588 AGCD01016617;AGCD01016618;GBDI01036861;XR_001233249;XR_260319 MODEL 10063798 ncrna LOC106149975 uncharacterized LOC106149975 NW_004955458 1973856 1978190 - 106149975 AGCD01047209;GBCQ01057482;XR_001236475 MODEL 8824114 protein-coding LOC102012063 NEDD4-binding protein 2-like 2 NW_004955407 28220425 28222169 + 102012063 AGCD01007577;XM_013505975 XP_013361429 MODEL 8781623 ncrna LOC102020339 uncharacterized LOC102020339 NW_004955417 27291344 27294537 - 102020339 AGCD01018545;GBDF01290011;XR_260505 MODEL 8892538 protein-coding Dbi diazepam binding inhibitor, acyl-CoA binding protein ENCODES a protein that exhibits benzodiazepine receptor binding (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to nutrient (ortholog); conditioned place preference (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN contractile muscle fiber (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955459 10342528 10347700 - 102023439 AGCD01048186;GBBH01031932;XM_005397678;XM_013521081 XP_005397735;XP_013376535 MODEL 8999657 ncrna LOC102017737 uncharacterized LOC102017737 NW_004955404 29784924 29788045 + 102017737 AGCD01003985;GBDJ01123967;XR_259327 MODEL 8961285 ncrna LOC102013261 uncharacterized LOC102013261 NW_004955410 25529093 25547298 + 102013261 AGCD01011158;AGCD01011159;GBDJ01166591;XR_001232700;XR_259865 MODEL 8857598 protein-coding LOC102012851 late histone H2B.L4-like NW_004955413 862577 885893 - 102012851 AGCD01013492;AGCD01013493;GBDI01162044;XM_013511494 XP_013366948 MODEL 8744167 protein-coding Kcnq2 potassium voltage-gated channel subfamily Q member 2 ENCODES a protein that exhibits ankyrin binding (ortholog); calmodulin binding (ortholog); potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); action potential initiation (ortholog); apoptosome assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant nocturnal frontal lobe epilepsy (ortholog); FOUND IN axon initial segment (ortholog); cell surface (ortholog); node of Ranvier (ortholog) NW_004955528 737416 792885 + 102011038 AGCD01069546;GBCE01016863;XM_005409965;XM_005409966;XM_005409967;XM_005409968;XM_005409969;XM_005409970;XM_005409971;XM_005409972;XM_005409973;XM_005409974;XM_013507499 XP_005410022;XP_005410023;XP_005410024;XP_005410025;XP_005410026;XP_005410027;XP_005410028;XP_005410029;XP_005410030;XP_005410031;XP_013362953 MODEL 8858527 pseudo LOC102008208 spermine synthase pseudogene NW_004955412 21750895 21751995 - 102008208 AGCD01013025 MODEL 8948782 protein-coding Ankrd9 ankyrin repeat domain 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN intracellular copper ion homeostasis (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955538 1735898 1739827 - 102014829 AGCD01071083;AGCD01071084;GBCE01187202;GBDF01001658;XM_013507881 XP_013363335 MODEL 8926338 protein-coding LOC102015457 uncharacterized LOC102015457 NW_004955441 9495483 9512225 - 102015457 AGCD01037022;GBDK01417984;XM_005391046 XP_005391103 MODEL 8981871 protein-coding LOC102016216 late cornified envelope protein 3B-like NW_004955592 850418 870805 + 102016216 AGCD01076331;AGCD01076332;AGCD01076333;GBDI01000487;XM_005414627;XM_013509980 XP_005414684;XP_013365434 MODEL 8819718 protein-coding LOC102019333 28S ribosomal protein S18c, mitochondrial NW_004955552 805450 806106 - 102019333 AGCD01072740;XM_005412189 XP_005412246 MODEL 8955362 protein-coding Dscc1 DNA replication and sister chromatid cohesion 1 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN maintenance of mitotic sister chromatid cohesion (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); post-translational protein acetylation (ortholog); FOUND IN chromatin (ortholog); chromosome, centromeric region (ortholog); Ctf18 RFC-like complex (ortholog) NW_004955417 25519341 25527168 - 102018830 AGCD01018486;GBDJ01180682;XM_013512833;XM_013512834 XP_013368287;XP_013368288 MODEL 8989146 pseudo LOC102010453 adenosine kinase pseudogene NW_004955458 14363282 14364041 - 102010453 AGCD01047832 MODEL 9014063 ncrna LOC102021113 uncharacterized LOC102021113 NW_004955413 17607365 17614888 + 102021113 AGCD01014159;GBDF01009939;XR_001233054;XR_001233055;XR_001233056;XR_260083;XR_260084 MODEL 10061771 protein-coding Jmjd7 jumonji domain containing 7 ENCODES a protein that exhibits aminopeptidase activity (ortholog); endopeptidase activity (ortholog); monooxygenase activity (ortholog); INVOLVED IN protein hydroxylation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955416 8626931 8635337 + 106146239 AGCD01017064;GBBH01082721;XM_005381318;XM_005381319;XM_013512525 XP_005381375;XP_005381376;XP_013367979 MODEL 9041808 protein-coding Eogt EGF domain specific O-linked N-acetylglucosamine transferase ENCODES a protein that exhibits protein O-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 4 (ortholog); genetic disease (ortholog) NW_004955421 18845626 18879008 + 102013835 AGCD01022058;AGCD01022059;GBDJ01390366;XM_005383814;XM_005383815;XM_013513795 XP_005383871;XP_005383872;XP_013369249 MODEL 8969950 ncrna LOC102005695 uncharacterized LOC102005695 NW_004955468 5827349 5829436 + 102005695 AGCD01051978;XR_263391 MODEL 9051425 protein-coding Espl1 extra spindle pole bodies like 1, separase ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); meiosis I (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); breast cancer (ortholog); COVID-19 (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog) NW_004955458 530269 553919 + 102017308 AGCD01047132;AGCD01047133;GBDF01082490;XM_005397164;XM_005397165;XM_005397166;XM_005397167 XP_005397221;XP_005397222;XP_005397223;XP_005397224 MODEL 8946911 protein-coding LOC102007826 zinc finger protein 14-like NW_004955569 1580699 1628988 + 102007826 AGCD01074671;AGCD01074672;AGCD01074673;GBDI01333117;XM_005413504 XP_005413561 MODEL 8699813 ncrna LOC102015854 uncharacterized LOC102015854 NW_004955489 8966832 8998732 + 102015854 AGCD01060025;GBDK01379970;XR_264026 MODEL 8880665 ncrna LOC102014733 uncharacterized LOC102014733 NW_004955404 1604950 1607580 + 102014733 AGCD01003224;GBDF01015681;XR_001234575;XR_259286 MODEL 8980438 protein-coding CUNH20orf144 chromosome unknown C20orf144 homolog NW_004955422 27654049 27655356 - 102027199 AGCD01023331;GBDI01161984;XM_005384840 XP_005384897 MODEL 8893761 pseudo LOC102009739 ubiquitin-conjugating enzyme E2 E3 pseudogene NW_004955427 22033843 22034577 - 102009739 AGCD01027464 MODEL 8927319 ncrna LOC102008960 uncharacterized LOC102008960 NW_004955500 4757497 4758238 - 102008960 AGCD01063810;XR_264224 MODEL 9043166 protein-coding LOC102014349 olfactory receptor 2D3 NW_004955414 22824126 22825094 + 102014349 AGCD01015479;XM_005380514 XP_005380571 MODEL 8973203 protein-coding Ace2 angiotensin converting enzyme 2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); angiotensin maturation (ortholog); angiotensin-mediated drinking behavior (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) NW_004955519 2591229 2643705 + 102015756 AGCD01067937;GBCC01002081;GQ262783;NM_001282361;XM_013506974;XM_013506975 ACT66267;NP_001269290;XP_013362428;XP_013362429 PROVISIONAL 39133940 misc_rna 7SK 7SK RNA 8994357 protein-coding Eif3i eukaryotic translation initiation factor 3 subunit I ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Colonic Neoplasms (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog); synapse (ortholog) NW_004955452 10588929 10595869 + 102018884 AGCD01044280;GBDF01010520;XM_005395055 XP_005395112 MODEL 8718794 ncrna LOC102021859 uncharacterized LOC102021859 NW_004955463 6152064 6152789 - 102021859 AGCD01049657;GBDF01145117;XR_001236626 MODEL 8845785 pseudo LOC102013971 nuclear receptor-binding factor 2 pseudogene NW_004955547 1394680 1395701 - 102013971 AGCD01072221 MODEL 8911227 pseudo LOC102008568 ubiquitin-protein ligase E3C-like NW_004955532 1668535 1681482 + 102008568 AGCD01070197 MODEL 8902496 protein-coding Grid2ip Grid2 interacting protein INVOLVED IN long-term synaptic depression (ortholog); regulation of postsynaptic cytosolic calcium ion concentration (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955460 13161761 13189175 + 102019986 AGCD01048674;GBCQ01140437;XM_005397888;XM_005397889;XM_013521105;XM_013521106;XM_013521107;XM_013521108 XP_005397945;XP_005397946;XP_013376559;XP_013376560;XP_013376561;XP_013376562 MODEL 9060791 ncrna LOC102011220 uncharacterized LOC102011220 NW_004955425 27826699 27828785 - 102011220 AGCD01025989;GBDF01079916;XR_261178 MODEL 8956886 protein-coding LOC102024560 transmembrane and coiled-coil domain-containing protein 5B-like NW_004955416 1323376 1331862 + 102024560 AGCD01016833;GBDF01043273;XM_005381168 XP_005381225 MODEL 10356953 protein-coding Cracd capping protein inhibiting regulator of actin dynamics INVOLVED IN epithelial structure maintenance (ortholog); maintenance of gastrointestinal epithelium (ortholog); negative regulation of barbed-end actin filament capping (ortholog) NW_004955447 14650035 14672593 - 106149494 AGCD01041018;GBDF01081844;GBDF01081845;XM_013518504 XP_013373958 MODEL 8968845 protein-coding LOC102011663 olfactory receptor 2T27-like NW_004955418 30179310 30182515 - 102011663 AGCD01019506;XM_013512880 XP_013368334 MODEL 8859240 ncrna LOC102010457 uncharacterized LOC102010457 NW_004955462 7333301 7356659 - 102010457 AGCD01049301;AGCD01049302;GBDF01308302;XR_001236602;XR_001236603 MODEL 8896691 protein-coding LOC102020708 uncharacterized LOC102020708 NW_004955531 2787208 2825362 - 102020708 AGCD01070055;GBDF01261180;XM_005410140 XP_005410197 MODEL 8996566 protein-coding LOC102016591 hyaluronidase-4-like NW_004955479 5297076 5318095 + 102016591 AGCD01056343;AGCD01056344;AGCD01056345;GBDF01051446;GBDK01268321;XM_005402338 XP_005402395 MODEL 8745866 protein-coding Bub3 BUB3 mitotic checkpoint protein INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); protein localization to kinetochore (ortholog); regulation of chromosome segregation (ortholog); ASSOCIATED WITH Premature Aging (ortholog); FOUND IN kinetochore (ortholog); nucleoplasm (ortholog) NW_004955477 1305937 1319330 + 102026634 AGCD01055504;GBDF01043135;XM_005401960;XM_005401961 XP_005402017;XP_005402018 MODEL 39131871 rrna 5S_rRNA 5S ribosomal RNA 9023590 protein-coding Aamp angio associated migratory cell protein ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN smooth muscle cell migration (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955453 15104229 15109487 + 102014007 AGCD01044885;GBDF01047198;XM_005395659;XM_005395660 XP_005395716;XP_005395717 MODEL 10331628 ncrna LOC106149976 uncharacterized LOC106149976 NW_004955458 4823190 4826267 - 106149976 AGCD01047441;XR_001236476 MODEL 8834737 ncrna LOC102015855 uncharacterized LOC102015855 NW_004955492 2416016 2425591 - 102015855 AGCD01060677;GBDF01208554;XR_264046 MODEL 8882064 ncrna LOC102013262 uncharacterized LOC102013262 NW_004955462 13861908 13874784 + 102013262 AGCD01049434;GBDF01307845;XR_001236609 MODEL 9008976 protein-coding LOC102020340 histone H1t-like NW_004955483 926053 926748 + 102020340 AGCD01057637;GBDF01277700;XM_005403307 XP_005403364 MODEL 8791288 pseudo LOC102017738 40S ribosomal protein S18 pseudogene NW_004955405 17787001 17787460 + 102017738 AGCD01005008;XR_259386 MODEL 8934086 protein-coding LOC102012852 olfactory receptor 52K1-like NW_004955414 19929257 19930261 - 102012852 AGCD01015343;XM_005380042 XP_005380099 MODEL 8710812 protein-coding Hspbp1 HSPA (Hsp70) binding protein 1 ENCODES a protein that exhibits molecular sequestering activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); positive regulation of protein ubiquitination (ortholog); FOUND IN extracellular space (ortholog) NW_004955567 948040 960621 + 102028243 AGCD01074448;AGCD01074449;GBDF01051098;XM_005413338;XM_005413345;XM_013509270 XP_005413395;XP_005413402;XP_013364724 MODEL 39134202 misc_rna 7SK 7SK RNA 8994030 protein-coding Kcnq3 potassium voltage-gated channel subfamily Q member 3 ENCODES a protein that exhibits calmodulin binding (ortholog); potassium channel activity (ortholog); protein kinase binding (ortholog); INVOLVED IN action potential initiation (ortholog); apoptosome assembly (ortholog); cellular response to ammonium ion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN axon initial segment (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955461 6793877 7119859 - 102012170 AGCD01048911;AGCD01048912;AGCD01048913;AGCD01048914;AGCD01048915;AGCD01048916;GBDK01419877;XM_005398013 XP_005398070 MODEL 8872707 protein-coding Fcrla Fc receptor like A FOUND IN cytoplasm (ortholog) NW_004955462 14604985 14611935 - 102017551 AGCD01049451;GBDK01219059;XM_005398290;XM_005398291;XM_013521426;XM_013521427;XM_013521428 XP_005398347;XP_005398348;XP_013376880;XP_013376881;XP_013376882 MODEL 8810579 protein-coding LOC102016218 serum albumin-like NW_004955402 63514382 63519795 + 102016218 AGCD01001675;AGCD01001676;GBCE01018604;GBDK01185460;XM_013512233 XP_013367687 MODEL 8720991 protein-coding Igf2bp2 insulin like growth factor 2 mRNA binding protein 2 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN cold-induced thermogenesis (ortholog); CRD-mediated mRNA stabilization (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); autosomal dominant tubulointerstitial kidney disease 1 (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytoskeleton (ortholog) NW_004955420 21818970 21957295 + 102009390 AGCD01021171;AGCD01021172;AGCD01021173;AGCD01021174;AGCD01021175;GBBH01160648;GBDJ01356061;XM_013513485 XP_013368939 MODEL 8847126 ncrna LOC102009338 uncharacterized LOC102009338 NW_004955403 20129167 20220568 - 102009338 AGCD01002154;XR_259187 MODEL 8920463 protein-coding LOC102013978 kallikrein-4-like NW_004955559 91484 103442 + 102013978 AGCD01073544;XM_013508940 XP_013364394 MODEL 39134203 misc_rna 7SK 7SK RNA 8815556 protein-coding LOC102003872 olfactory receptor 1A1-like NW_004955481 248188 249135 + 102003872 AGCD01056784;XM_005402915 XP_005402972 MODEL 39132125 rrna 5S_rRNA 5S ribosomal RNA 8955140 protein-coding LOC102007827 UDP-glucuronosyltransferase 2B17-like NW_004955447 4402579 4413284 - 102007827 AGCD01040717;GBCB01083295;XM_005392819;XM_013518535 XP_005392876;XP_013373989 MODEL 8854603 protein-coding LOC102015462 ankyrin repeat domain-containing protein 18A-like NW_004955556 26547 41723 + 102015462 AGCD01073156;AGCD01073157;AGCD01073158;XM_005412617 XP_005412674 MODEL 8938877 protein-coding Diras2 DIRAS family GTPase 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN positive regulation of MAP kinase activity (ortholog); FOUND IN plasma membrane (ortholog) NW_004955515 1526436 1551811 + 102014479 AGCD01067230;GBBH01086252;GBDK01025126;XM_005408872 XP_005408929 MODEL 10265557 ncrna LOC106149977 uncharacterized LOC106149977 NW_004955458 1257253 1258263 - 106149977 AGCD01047172;GBCQ01085023;XR_001236477 MODEL 8841570 protein-coding Acer1 alkaline ceramidase 1 ENCODES a protein that exhibits N-acylsphingosine amidohydrolase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to calcium ion (ortholog); ceramide catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; FOUND IN endoplasmic reticulum (ortholog) NW_004955495 3247170 3271417 + 102015861 AGCD01061843;AGCD01061844;GBCC01007225;XM_005405727 XP_005405784 MODEL 8984726 pseudo LOC102014357 40S ribosomal protein S4 pseudogene NW_004955417 12217976 12220136 + 102014357 AGCD01018156 MODEL 8947218 ncrna LOC102019334 uncharacterized LOC102019334 NW_004955555 524438 543781 - 102019334 AGCD01073035;AGCD01073036;GBDF01250812;XR_001232299;XR_264950;XR_264952 MODEL 8723112 protein-coding Dse dermatan sulfate epimerase ENCODES a protein that exhibits chondroitin-glucuronate 5-epimerase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome musculocontractural type 2 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955526 348673 393328 - 102028571 AGCD01069226;AGCD01069227;AGCD01069228;AGCD01069229;GBDJ01028388;XM_005409751;XM_005409752 XP_005409808;XP_005409809 MODEL 8782861 protein-coding Immp2l inner mitochondrial membrane peptidase subunit 2 ENCODES a protein that exhibits peptidase activity (ortholog); signal peptidase activity (ortholog); INVOLVED IN blood circulation (ortholog); brain development (ortholog); cerebellum vasculature development (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH autistic disorder (ortholog); diffuse large B-cell lymphoma (ortholog); FOUND IN mitochondrial inner membrane peptidase complex (ortholog); mitochondrion (ortholog) NW_004955410 14567787 15420025 - 102014333 AGCD01010910;AGCD01010911;AGCD01010912;AGCD01010913;AGCD01010914;AGCD01010915;AGCD01010916;AGCD01010917;AGCD01010918;AGCD01010919;AGCD01010920;AGCD01010921;AGCD01010922;AGCD01010923;AGCD01010924;AGCD01010925;AGCD01010926;GBCQ01071840;XM_005377314 XP_005377371 MODEL 8824980 protein-coding LOC102021119 uncharacterized LOC102021119 NW_004955414 26399001 26401431 - 102021119 AGCD01015642;AGCD01015643;XM_013511742 XP_013367196 MODEL 8952464 protein-coding LOC102021862 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase-like NW_004955465 3746876 3764999 - 102021862 AGCD01050389;AGCD01050390;AGCD01050391;GBBH01167444;XM_005398838 XP_005398895 MODEL 8707950 ncrna LOC102013619 uncharacterized LOC102013619 NW_004955421 18803353 18811236 - 102013619 AGCD01022056;GBDF01014486;XR_001233862;XR_260797 MODEL 8935205 pseudo LOC102008572 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955439 2667966 2668976 - 102008572 AGCD01035656 MODEL 8830862 protein-coding Eola1 endothelium and lymphocyte associated ASCH domain 1 INVOLVED IN regulation of gene expression (ortholog); regulation of interleukin-6 production (ortholog); FOUND IN mitochondrion (ortholog) NW_004955498 1911103 1916645 + 102021893 AGCD01062753;GBDJ01129367;XM_005406399 XP_005406456 MODEL 8872871 protein-coding LOC102012064 olfactory receptor 10C1-like NW_004955458 2337356 2338318 - 102012064 AGCD01047225;XM_005397239 XP_005397296 MODEL 9027750 pseudo LOC102011675 BTB/POZ domain-containing protein KCTD3 pseudogene NW_004955422 13339184 13342304 + 102011675 AGCD01022821 MODEL 8888469 protein-coding Espn espin ENCODES a protein that exhibits actin filament binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); locomotory behavior (ortholog); microvillar actin bundle assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 36 (ortholog); Deafness (ortholog); FOUND IN actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog); brush border (ortholog) NW_004955486 6130190 6156859 - 102025585 AGCD01059108;AGCD01059109;GBDF01000176;GBDF01000177;XM_013504283 XP_013359737 MODEL 8737022 protein-coding CUNH21orf140 chromosome unknown C21orf140 homolog NW_004955407 33757974 33758956 - 102027146 AGCD01007707;GBDF01080715;XM_005375702 XP_005375759 MODEL 8725099 protein-coding Dbn1 drebrin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal motor inhibitor activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell communication by chemical coupling (ortholog); cell communication by electrical coupling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cognitive disorder (ortholog); Down syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); asymmetric synapse (ortholog) NW_004955408 29695442 29705417 - 102027948 AGCD01008766;AGCD01008767;GBBH01209235;GBCB01098197;XM_013506526 XP_013361980 MODEL 9015681 pseudo LOC102009740 aldose reductase-related protein 2 pseudogene NW_004955428 145019 146060 + 102009740 AGCD01027566 MODEL 8963666 protein-coding Ct83 cancer/testis antigen 83 NW_004955534 3459257 3460553 + 102020376 AGCD01070584;GBDF01156435;XM_005410471 XP_005410528 MODEL 8964277 protein-coding Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); neuron remodeling (ortholog); substrate-dependent cell migration (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN neuron projection (ortholog) NW_004955437 2916598 3070771 + 102020375 AGCD01034292;AGCD01034293;AGCD01034294;AGCD01034295;AGCD01034296;GBDF01127878;XM_005389537;XM_005389538;XM_013516790;XM_013516791;XM_013516792;XM_013516793;XM_013516794;XM_013516795;XM_013516797;XM_013516798;XM_013516799 XP_005389594;XP_005389595;XP_013372244;XP_013372245;XP_013372246;XP_013372247;XP_013372248;XP_013372249;XP_013372251;XP_013372252;XP_013372253 MODEL 8864105 pseudo LOC102015859 U6 snRNA-associated Sm-like protein LSm6 pseudogene NW_004955422 26409372 26409612 + 102015859 AGCD01023288 MODEL 8829883 pseudo LOC102011682 rho guanine nucleotide exchange factor 38-like NW_004955502 656842 673369 - 102011682 AGCD01064247 MODEL 39133941 misc_rna 7SK 7SK RNA 8932007 protein-coding Deaf1 DEAF1 transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN behavioral fear response (ortholog); embryonic skeletal system development (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955476 11398187 11422633 + 102013079 AGCD01055456;AGCD01055457;GBDF01050073;GBDJ01088437;XM_013502968;XM_013502969 XP_013358422;XP_013358423 MODEL 8965290 protein-coding Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone acetyltransferase binding (ortholog); LBD domain binding (ortholog); INVOLVED IN adrenal cortex formation (ortholog); adrenal gland development (ortholog); blood vessel development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH atrial heart septal defect 8 (ortholog); brain ischemia (ortholog); congenital heart disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955436 20370950 20372677 + 102012124 AGCD01034022;GBDJ01003478;XM_005389258 XP_005389315 MODEL 9039765 protein-coding Hspd1 heat shock protein family D (Hsp60) member 1 ENCODES a protein that exhibits apolipoprotein A-I binding (ortholog); apolipoprotein binding (ortholog); cysteine-type endopeptidase activator activity (ortholog); INVOLVED IN adhesion of symbiont to host (ortholog); apoptotic mitochondrial changes (ortholog); B cell activation (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); coated vesicle (ortholog) NW_004955403 3062724 3073419 + 102014963 AGCD01001746;AGCD01001747;GBBH01032751;GBBH01032752;XM_013512058 XP_013367512 MODEL 8934635 pseudo LOC102011221 DNA-directed RNA polymerase II subunit RPB3 pseudogene NW_004955426 24102744 24103895 + 102011221 AGCD01026668 MODEL 8729019 pseudo LOC102014735 cyclin-G1 pseudogene NW_004955404 29431483 29432538 + 102014735 AGCD01003975 MODEL 8804705 protein-coding Dis3 DIS3 exosome endoribonuclease and 3''-5'' exoribonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); endonuclease activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN CUT catabolic process (ortholog); RNA catabolic process (ortholog); RNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH multiple myeloma (ortholog); Perlman syndrome (ortholog); FOUND IN cytosol (ortholog); nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog) NW_004955404 33897681 33924069 + 102027138 AGCD01004083;AGCD01004084;GBDF01193658;XM_005374190;XM_005374191;XR_001234968 XP_005374247;XP_005374248 MODEL 8957137 protein-coding Cracdl CRACD like NW_004955470 5227759 5343535 - 102007106 AGCD01052747;AGCD01052748;GBBH01004131;XM_005400727;XM_013522804;XM_013522805;XM_013522806;XM_013522807 XP_005400784;XP_013378258;XP_013378259;XP_013378260;XP_013378261 MODEL 9000811 ncrna LOC102008961 uncharacterized LOC102008961 NW_004955500 7699030 7703323 + 102008961 AGCD01063941;GBDF01005578;XR_001231468 MODEL 8714798 ncrna LOC102016593 uncharacterized LOC102016593 NW_004955417 8741394 8742945 + 102016593 AGCD01018033;GBDJ01122966;XR_260466 MODEL 8809888 protein-coding Igf2bp3 insulin like growth factor 2 mRNA binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); malignant mesothelioma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955410 25605323 25734845 - 102014023 AGCD01011162;AGCD01011163;AGCD01011164;AGCD01011165;AGCD01011166;AGCD01011167;AGCD01011168;AGCD01011169;AGCD01011170;AGCD01011171;GBCE01008969;XM_005377396;XM_013510584;XM_013510585 XP_005377453;XP_013366038;XP_013366039 MODEL 8782041 ncrna LOC102008209 uncharacterized LOC102008209 NW_004955467 9932033 9948996 + 102008209 AGCD01051536;AGCD01051537;GBBH01110880;XR_001236856 MODEL 9012759 ncrna LOC102020709 uncharacterized LOC102020709 NW_004955533 1106138 1115387 - 102020709 AGCD01070343;GBCQ01075651;XR_001232034;XR_264745 MODEL 8938961 protein-coding Immt inner membrane mitochondrial protein INVOLVED IN cristae formation (ortholog); mitochondrial calcium ion homeostasis (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); osteoarthritis (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955424 1438158 1476552 + 102018941 AGCD01024237;GBDI01082771;XM_005385400;XM_005385402;XM_005385403;XM_005385404;XM_005385405;XM_013514670 XP_005385457;XP_005385459;XP_005385460;XP_005385461;XP_005385462;XP_013370124 MODEL 39134204 misc_rna 7SK 7SK RNA 39131872 rrna 5S_rRNA 5S ribosomal RNA 8965331 ncrna LOC102012854 uncharacterized LOC102012854 NW_004955471 10905684 10911425 - 102012854 AGCD01053235;GBDF01112987;XR_263533 MODEL 8833132 ncrna LOC102013263 uncharacterized LOC102013263 NW_004955410 30910864 30939783 - 102013263 AGCD01011313;GBDJ01050962;XR_259888 MODEL 8996610 ncrna LOC102017739 uncharacterized LOC102017739 NW_004955452 16271314 16273308 + 102017739 AGCD01044504;XR_262702 MODEL 9000066 pseudo LOC102005697 calcyclin-binding protein pseudogene NW_004955414 19427986 19428570 + 102005697 AGCD01015315 MODEL 8735813 protein-coding Fcrlb Fc receptor like B INVOLVED IN negative regulation of immune response (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955462 14591367 14597183 - 102017206 AGCD01049451;GBCE01092482;XM_005398288 XP_005398345 MODEL 8810106 protein-coding Grifin galectin-related inter-fiber protein NW_004955460 12813228 12814698 - 102023123 AGCD01048664;GBDI01006479;XM_005397969;XM_013521154 XP_005398026;XP_013376608 MODEL 8981881 protein-coding LOC102016221 amine oxidase [flavin-containing] B-like NW_004955832 1753 14560 + 102016221 AGCD01078449;GBCE01162221;XM_005415126 XP_005415183 MODEL 8730640 protein-coding LOC102005698 olfactory receptor 51I1-like NW_004955414 21369682 21370626 - 102005698 AGCD01015417;XM_005380087 XP_005380144 MODEL 8848527 ncrna LOC102021122 uncharacterized LOC102021122 NW_004955478 2702024 2708949 + 102021122 AGCD01055802;GBDF01209258;XR_263686 MODEL 8719141 protein-coding LOC102009339 netrin receptor UNC5D-like NW_004955775 2794 4739 - 102009339 AGCD01078325;GBBH01098166;XM_005415109 XP_005415166 MODEL 8881084 pseudo LOC102003873 40S ribosomal protein S18 pseudogene NW_004955418 24453774 24454252 - 102003873 AGCD01019333 MODEL 8755734 protein-coding Bud13 BUD13 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Achalasia-Progeroid Syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U2-type precatalytic spliceosome (ortholog) NW_004955412 18095069 18113386 - 102020228 AGCD01012924;AGCD01012925;AGCD01012926;GBDF01156360;XM_013511204;XM_013511205 XP_013366658;XP_013366659 MODEL 8926974 ncrna LOC102020344 uncharacterized LOC102020344 NW_004955420 19033302 19040719 + 102020344 AGCD01021053;GBDJ01305271;XR_260724 MODEL 8763593 ncrna LOC102009741 uncharacterized LOC102009741 NW_004955509 2061123 2079468 + 102009741 AGCD01065988;XR_001231659;XR_264399 MODEL 9063739 protein-coding Eif3j eukaryotic translation initiation factor 3 subunit J ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN eukaryotic translation initiation factor 3 complex (ortholog) NW_004955416 11066030 11085054 + 102009383 AGCD01017172;AGCD01017173;AGCD01017174;GBDF01047000;XM_005381693 XP_005381750 MODEL 8810799 protein-coding Jmjd8 jumonji domain containing 8 INVOLVED IN cellular respiration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of sprouting angiogenesis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955442 16519394 16521106 + 102020168 AGCD01037901;GBBH01127026;XM_005391620;XM_005391621 XP_005391677;XP_005391678 MODEL 8756906 pseudo LOC102015465 E3 ubiquitin-protein ligase RLIM pseudogene NW_004955443 15375124 15377155 - 102015465 AGCD01038538;XM_005392026 MODEL 8816133 protein-coding Acer2 alkaline ceramidase 2 ENCODES a protein that exhibits N-acylsphingosine amidohydrolase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); ceramide catabolic process (ortholog); DNA damage response (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955434 21786857 21810648 + 102027892 AGCD01032655;AGCD01032656;GBCE01104129;GBDF01113399;XM_005388734 XP_005388791 MODEL 8960031 protein-coding Anks1b ankyrin repeat and sterile alpha motif domain containing 1B ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); postsynapse to nucleus signaling pathway (ortholog); receptor localization to synapse (ortholog); ASSOCIATED WITH Wilson disease (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); nucleoplasm (ortholog) NW_004955405 34701613 35776076 - 102016229 AGCD01005382;AGCD01005383;AGCD01005384;AGCD01005385;AGCD01005386;AGCD01005387;AGCD01005388;AGCD01005389;AGCD01005390;AGCD01005391;AGCD01005392;AGCD01005393;AGCD01005394;AGCD01005395;AGCD01005396;AGCD01005397;AGCD01005398;AGCD01005399;AGCD01005400;GBDF01207486;GBDJ01338802;XM_005374511;XM_013518589 XP_005374568;XP_013374043 MODEL 9018888 protein-coding Kcnq4 potassium voltage-gated channel subfamily Q member 4 ENCODES a protein that exhibits potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN inner ear morphogenesis (ortholog); negative regulation of synaptic transmission, dopaminergic (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 2A (ortholog); genetic disease (ortholog); Hearing Loss (ortholog) NW_004955537 624217 671407 + 102015765 AGCD01070870;GBCB01057553;GBCB01057557;XM_005410715 XP_005410772 MODEL 8983221 protein-coding LOC102019337 zinc finger protein 112 NW_004955555 1654784 1704689 - 102019337 AGCD01073096;AGCD01073097;GBCE01005259;GBDK01219670;XM_013508735 XP_013364189 MODEL 8843810 protein-coding LOC102010459 potassium channel subfamily U member 1-like NW_004955463 12698574 12705738 + 102010459 AGCD01049856;AGCD01049857;GBBH01200395;XM_005398408 XP_005398465 MODEL 9040485 pseudo LOC102017740 methylosome subunit pICln-like NW_004955452 6163421 6165157 + 102017740 AGCD01044092 MODEL 8943771 pseudo LOC102021863 uncharacterized LOC102021863 NW_004955465 6775792 6836185 + 102021863 AGCD01050448 MODEL 9010363 protein-coding Decr1 2,4-dienoyl-CoA reductase 1 ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); identical protein binding (ortholog); NADPH binding (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH 2,4-Dienoyl-CoA Reductase Deficiency (ortholog); lipid metabolism disorder (ortholog); FOUND IN catalytic complex (ortholog); mitochondrion (ortholog) NW_004955417 6893231 6931754 + 102010802 AGCD01017994;GBCQ01036028;XM_005381763 XP_005381820 MODEL 8904016 protein-coding LOC102013622 zinc finger protein 782-like NW_004955422 23753650 23770962 + 102013622 AGCD01023205;AGCD01023206;GBCB01120769;XM_013513988;XM_013513989 XP_013369442;XP_013369443 MODEL 8737194 protein-coding LOC102008576 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like NW_004955546 1452766 1495831 + 102008576 AGCD01072068;AGCD01072069;GBBH01214822;GBDI01370020;XM_013508414 XP_013363868 MODEL 8839916 protein-coding LOC102011222 translation initiation factor IF-2-like NW_004955504 1462038 1467322 + 102011222 AGCD01064839;AGCD01064840;GBDI01357943;GBDK01076347;XM_013505915 XP_013361369 MODEL 8986694 protein-coding Cited4 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); response to estrogen (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955537 688264 689562 - 102004857 AGCD01070870;GBDK01058306;XM_005410581 XP_005410638 MODEL 8775972 protein-coding Aanat aralkylamine N-acetyltransferase ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); AP-3 adaptor complex binding (ortholog); aralkylamine N-acetyltransferase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); circadian rhythm (ortholog); melatonin biosynthetic process (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH advanced sleep phase syndrome (ortholog); delayed sleep phase syndrome (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955506 5828666 5834812 - 102024363 AGCD01065390;GBCB01082756;XM_005407430;XM_013506018;XM_013506019;XM_013506020;XM_013506021 XP_005407487;XP_013361472;XP_013361473;XP_013361474;XP_013361475 MODEL 9013478 protein-coding Eomes eomesodermin ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); blastocyst development (ortholog); brain development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); autoimmune disease of the nervous system (ortholog); Colonic Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955430 19280460 19287060 - 102018517 AGCD01029712;GBDJ01152655;XM_005387507 XP_005387564 MODEL 8751534 protein-coding Espnl espin like ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); FOUND IN stereocilium tip (ortholog) NW_004955542 2430610 2453738 - 102028235 AGCD01071522;GBBH01227849;XM_005411198 XP_005411255 MODEL 8814870 protein-coding LOC102005700 uncharacterized LOC102005700 NW_004955470 11975332 11978904 - 102005700 AGCD01052916;GBCQ01088386;XM_013522705 XP_013378159 MODEL 8767552 protein-coding Dis3l DIS3 like exosome 3'-5' exoribonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); enzyme binding (ortholog); exoribonuclease II activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); rRNA catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog) NW_004955450 9279323 9313402 - 102029577 AGCD01042589;AGCD01042590;GBDI01186429;GBDK01240217;XM_005393704 XP_005393761 MODEL 8951110 pseudo LOC102024561 xenotropic and polytropic retrovirus receptor 1 pseudogene NW_004955478 9436576 9442072 + 102024561 AGCD01056071 MODEL 8948248 ncrna LOC102016600 uncharacterized LOC102016600 NW_004955420 22929235 22934191 + 102016600 AGCD01021214;AGCD01021215;GBDJ01391250;XR_260741 MODEL 8775797 protein-coding Ctage5 CTAGE family member 5, ER export factor NW_004955409 21968308 22081072 - 102014985 AGCD01009998;AGCD01009999;AGCD01010000;AGCD01010001;AGCD01010002;AGCD01010003;AGCD01010004;AGCD01010005;AGCD01010006;AGCD01010007;AGCD01010008;GBCB01001295;XM_005376883 XP_005376940 MODEL 9046145 pseudo LOC102015860 fibroblast growth factor 4-like NW_004955422 14837357 14843688 - 102015860 AGCD01022870 MODEL 10140023 ncrna LOC106149978 uncharacterized LOC106149978 NW_004955458 2108409 2134724 + 106149978 AGCD01047214;AGCD01047215;GBDI01150316;XR_001236483 MODEL 8901497 ncrna LOC102014364 uncharacterized LOC102014364 NW_004955420 22431967 22442934 - 102014364 AGCD01021199;GBDF01254461;XR_260739 MODEL 39133942 misc_rna 7SK 7SK RNA 8788461 protein-coding LOC102012855 vomeronasal type-1 receptor 90-like NW_004955414 15022049 15022963 - 102012855 AGCD01015170;XM_005380442 XP_005380499 MODEL 8871023 protein-coding Dsel dermatan sulfate epimerase like ENCODES a protein that exhibits chondroitin-glucuronate 5-epimerase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan metabolic process (ortholog); dermatan sulfate proteoglycan metabolic process (ortholog) NW_004955402 51017963 51023508 - 102029921 AGCD01001289;GBBH01036747;GBCE01075963;XM_005373043 XP_005373100 MODEL 8897145 pseudo LOC102009743 tubulin alpha-3E chain pseudogene NW_004955429 3059738 3060342 - 102009743 AGCD01028454 MODEL 8772615 pseudo LOC102012067 high mobility group protein B1 pseudogene NW_004955409 17116938 17117921 - 102012067 AGCD01009766;XR_259785 MODEL 8720329 protein-coding Grik1 glutamate ionotropic receptor kainate type subunit 1 ENCODES a protein that exhibits extracellularly glutamate-gated ion channel activity (ortholog); glutamate binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN adult behavior (ortholog); behavioral response to pain (ortholog); excitatory postsynaptic potential (ortholog); PARTICIPATES IN long term potentiation; ASSOCIATED WITH childhood absence epilepsy (ortholog); status epilepticus (ortholog); visual epilepsy (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); ionotropic glutamate receptor complex (ortholog) NW_004955407 28899643 29308936 - 102027813 AGCD01007596;AGCD01007597;AGCD01007598;AGCD01007599;AGCD01007600;AGCD01007601;AGCD01007602;AGCD01007603;AGCD01007604;AGCD01007605;AGCD01007606;XM_005375621;XM_005375622 XP_005375678;XP_005375679 MODEL 8966102 protein-coding LOC102014736 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 NW_004955405 4833420 4914987 + 102014736 AGCD01004655;AGCD01004656;AGCD01004657;AGCD01004658;AGCD01004659;AGCD01004660;AGCD01004661;AGCD01004662;AGCD01004663;AGCD01004664;GBBH01035610;GBBH01138790;XM_013517354 XP_013372808 MODEL 8844879 protein-coding Hspg2 heparan sulfate proteoglycan 2 ENCODES a protein that exhibits collagen V binding (ortholog); dystroglycan binding (ortholog); protease binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); brain development (ortholog); cardiac muscle tissue development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); carotid artery disease (ortholog); Childhood Schizophrenia (ortholog); FOUND IN basement membrane; extracellular matrix (ortholog) NW_004955452 2056428 2141937 - 102011947 AGCD01043876;AGCD01043877;GBDJ01025170;XM_013519588;XM_013519589 XP_013375042;XP_013375043 MODEL 8907185 pseudo LOC102017743 UPF0160 protein MYG1, mitochondrial pseudogene NW_004955454 2036921 2037774 + 102017743 AGCD01045001 MODEL 9034120 protein-coding Dbndd1 dysbindin domain containing 1 NW_004955541 3462667 3465769 - 102022015 AGCD01071449;GBDK01196871;GBDK01196872;XM_013507966 XP_013363420 MODEL 8800471 protein-coding LOC102007836 uncharacterized LOC102007836 NW_004955599 462585 469137 + 102007836 AGCD01076650;AGCD01076651;GBDJ01147444;XM_005414765;XR_265153 XP_005414822 MODEL 8766864 pseudo LOC102008213 RWD domain-containing protein 1 pseudogene NW_004955472 2276716 2278452 - 102008213 AGCD01053451 MODEL 39134205 misc_rna 7SK 7SK RNA 8838914 protein-coding LOC102009342 translation initiation factor IF-2-like NW_004955404 10719070 10720405 + 102009342 AGCD01003391;GBDF01220559;XM_005374052 XP_005374109 MODEL 8860302 pseudo LOC102020348 nucleophosmin pseudogene NW_004955492 6061344 6066275 + 102020348 AGCD01060762 MODEL 8752660 protein-coding Bud23 BUD23 rRNA methyltransferase and ribosome maturation factor ENCODES a protein that exhibits protein heterodimerization activity (ortholog); rRNA (guanine) methyltransferase activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); ASSOCIATED WITH Williams-Beuren syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955456 14047409 14057483 - 102024647 AGCD01046632;GBBH01060290;XM_005396771 XP_005396828 MODEL 8799473 protein-coding Cracr2a calcium release activated channel regulator 2A ENCODES a protein that exhibits calcium ion binding (ortholog); G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); endosomal transport (ortholog); intracellular protein localization (ortholog); FOUND IN cytoplasm (ortholog); Golgi membrane (ortholog); immunological synapse (ortholog) NW_004955413 1425165 1544226 - 102026306 AGCD01013521;AGCD01013522;GBDK01281143;XM_005378720;XM_005378721;XM_005378722;XM_013511549;XM_013511550;XM_013511551;XM_013511552 XP_005378777;XP_005378778;XP_005378779;XP_013367003;XP_013367004;XP_013367005;XP_013367006 MODEL 8754913 pseudo LOC102013979 amyloid beta A4 protein pseudogene NW_004955444 13139589 13140893 + 102013979 AGCD01039093 MODEL 8860607 protein-coding Fcsk fucose kinase ENCODES a protein that exhibits fucokinase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); GDP-L-fucose salvage (ortholog); response to dopamine (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH Congenital Disorder of Glycosylation with Defective Fucosylation (ortholog); Congenital Disorder of Glycosylation with Defective Fucosylation 2 (ortholog); Neurodevelopmental Disorders (ortholog) NW_004955484 3259165 3278621 + 102003876 AGCD01058168;AGCD01058169;GBDI01127396;XM_005403481;XM_005403482;XM_005403483 XP_005403538;XP_005403539;XP_005403540 MODEL 39132127 rrna 5S_rRNA 5S ribosomal RNA 8755730 ncrna LOC102019338 uncharacterized LOC102019338 NW_004955570 1719054 1724037 + 102019338 AGCD01074826;XR_265047 MODEL 8969485 protein-coding Dis3l2 DIS3 like 3'-5' exoribonuclease 2 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); magnesium ion binding (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN miRNA catabolic process (ortholog); mitotic cell cycle (ortholog); mitotic sister chromatid separation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatoblastoma (ortholog); nephroblastoma (ortholog); FOUND IN cytoplasm (ortholog); P-body (ortholog) NW_004955453 3558744 3851222 - 102017534 AGCD01044664;AGCD01044665;AGCD01044666;AGCD01044667;AGCD01044668;AGCD01044669;GBDK01278639;XM_005395381;XM_005395382;XM_005395383;XM_005395384;XM_005395385;XM_013519947 XP_005395438;XP_005395439;XP_005395440;XP_005395441;XP_005395442;XP_013375401 MODEL 8724654 protein-coding LOC102008964 zinc finger CCHC-type and RNA-binding motif-containing protein 1 NW_004955426 18643581 18647670 - 102008964 AGCD01026526;AGCD01026527;GBCC01039405;XM_005386263 XP_005386320 MODEL 8738007 protein-coding LOC102008580 uncharacterized LOC102008580 NW_004955558 1650552 1710254 + 102008580 AGCD01073456;AGCD01073457;AGCD01073458;AGCD01073459;AGCD01073460;AGCD01073461;AGCD01073462;XM_013508849 XP_013364303 MODEL 8766439 ncrna LOC102016225 uncharacterized LOC102016225 NW_004955404 11945339 11952147 - 102016225 AGCD01003449;GBBH01075036;XR_259302 MODEL 9027625 ncrna LOC102003874 uncharacterized LOC102003874 NW_004955482 8396477 8398258 + 102003874 AGCD01057519;GBDF01127761;XR_263850 MODEL 39131873 rrna 5S_rRNA 5S ribosomal RNA 8821237 protein-coding LOC102011688 uncharacterized LOC102011688 NW_004955429 5818013 5828157 + 102011688 AGCD01028537;XM_013515350 XP_013370804 MODEL 8807101 protein-coding Decr2 2,4-dienoyl-CoA reductase 2 ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); trans-2-enoyl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN unsaturated fatty acid biosynthetic process (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955442 16799927 16807199 - 102028024 AGCD01037916;GBDJ01354928;XM_005391647;XM_005391648 XP_005391704;XP_005391705 MODEL 9019696 protein-coding Aar2 AAR2 splicing factor PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Developmental Disabilities (ortholog) NW_004955422 25306056 25335572 - 102027198 AGCD01023248;GBDF01032600;XM_005384752;XM_013514311 XP_005384809;XP_013369765 MODEL 8983008 pseudo LOC102013264 sorting nexin-1 pseudogene NW_004955410 705354 707003 + 102013264 AGCD01010596 MODEL 8870623 protein-coding LOC102020713 melanoma-associated antigen B4-like NW_004955539 2864527 2870091 - 102020713 AGCD01071236;AGCD01071237;GBDF01280495;XM_005410905 XP_005410962 MODEL 8713386 protein-coding Eif3k eukaryotic translation initiation factor 3 subunit K ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) NW_004955468 849149 858239 - 102012521 AGCD01051741;GBBH01000032;XM_005399841 XP_005399898 MODEL 9046093 protein-coding Ep300 EP300 lysine acetyltransferase ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); acetyltransferase activity (ortholog); acyltransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); B cell differentiation (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); alcohol use disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955413 26647553 26727875 + 102015395 AGCD01014465;AGCD01014466;AGCD01014467;GBBH01093312;GBDF01017704;XM_005379339 XP_005379396 MODEL 10118803 protein-coding LOC106149979 translation initiation factor IF-2-like NW_004955459 2332304 2333294 + 106149979 AGCD01047988;GBCQ01090380;XM_013521050 XP_013376504 MODEL 8796282 pseudo LOC102015470 60S ribosomal protein L7-like NW_004955450 16063028 16064451 + 102015470 AGCD01042829 MODEL 39133943 misc_rna 7SK 7SK RNA 8775760 protein-coding Ctbp1 C-terminal binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); genetic disease (ortholog); HYPOTONIA, ATAXIA, DEVELOPMENTAL DELAY, AND TOOTH ENAMEL DEFECT SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); GABA-ergic synapse (ortholog) NW_004955514 630168 652817 - 102014387 AGCD01067016;GBCC01048888;XM_005408694;XM_005408695 XP_005408751;XP_005408752 MODEL 9033989 protein-coding LOC102015862 olfactory receptor 1078-like NW_004955495 8410886 8411842 + 102015862 AGCD01062205;XM_005406107 XP_005406164 MODEL 8915488 ncrna LOC102012860 uncharacterized LOC102012860 NW_004955418 16415786 16489113 - 102012860 AGCD01019124;GBDF01307770;XR_001233536;XR_260562;XR_260563 MODEL 8841217 pseudo LOC102010460 40S ribosomal protein S14 pseudogene NW_004955463 13024771 13025227 - 102010460 AGCD01049860 MODEL 8810101 protein-coding LOC102021124 probable E3 ubiquitin-protein ligase makorin-3 NW_004955416 31052017 31052794 + 102021124 AGCD01017724;XM_013512430 XP_013367884 MODEL 8724640 protein-coding Cracr2b calcium release activated channel regulator 2B INVOLVED IN store-operated calcium entry (ortholog) NW_004955476 11299353 11304105 - 102008722 AGCD01055448;GBCB01131476;XM_013502948;XM_013502949;XM_013502950;XM_013502951;XM_013502952;XM_013502953;XM_013502954;XM_013502955;XM_013502956;XM_013502957 XP_013358402;XP_013358403;XP_013358404;XP_013358405;XP_013358406;XP_013358407;XP_013358408;XP_013358409;XP_013358410;XP_013358411 MODEL 8845226 pseudo LOC102021865 histone-lysine N-methyltransferase SUV39H2-like NW_004955466 11408957 11433268 - 102021865 AGCD01051093 MODEL 8935628 protein-coding Anks3 ankyrin repeat and sterile alpha motif domain containing 3 ASSOCIATED WITH Dwarfism (ortholog); Hydrops Fetalis (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog) NW_004955442 12752468 12775081 + 102006078 AGCD01037745;GBDI01217752;XM_005391276;XM_013517712;XM_013517713;XM_013517714;XM_013517715;XM_013517716;XM_013517717 XP_005391333;XP_013373166;XP_013373167;XP_013373168;XP_013373169;XP_013373170;XP_013373171 MODEL 8970309 protein-coding Dsg1 desmoglein 1 ENCODES a protein that exhibits gamma-catenin binding (ortholog); INVOLVED IN maternal process involved in female pregnancy (ortholog); protein stabilization (ortholog); response to progesterone (ortholog); ASSOCIATED WITH allergic disease (ortholog); Chronic Periodontitis (ortholog); Congenital Erythroderma with Palmoplantar Keratoderma, Hypotrichosis, and Hyper-IgE (ortholog); FOUND IN apical plasma membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955402 18668717 18704329 + 102017402 AGCD01000536;GBDI01317449;XM_005372741 XP_005372798 MODEL 8922533 pseudo LOC102011225 olfactory receptor 1013-like NW_004955511 1812470 1813401 + 102011225 AGCD01066380 MODEL 8836666 protein-coding Kcnq5 potassium voltage-gated channel subfamily Q member 5 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 46 (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN calyx of Held (ortholog); clathrin coat (ortholog); plasma membrane (ortholog) NW_004955488 7406633 7928526 + 102003557 AGCD01059683;AGCD01059684;AGCD01059685;AGCD01059686;AGCD01059687;AGCD01059688;AGCD01059689;AGCD01059690;AGCD01059691;AGCD01059692;AGCD01059693;AGCD01059694;AGCD01059695;AGCD01059696;AGCD01059697;AGCD01059698;GBCE01157011;GBDI01207132;XM_005404480;XM_013504414;XM_013504415 XP_005404537;XP_013359868;XP_013359869 MODEL 8796210 protein-coding Igf2r insulin like growth factor 2 receptor ENCODES a protein that exhibits D-mannose binding (ortholog); enzyme binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); G protein-coupled receptor signaling pathway (ortholog); liver development (ortholog); PARTICIPATES IN renin-angiotensin cascade pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); Beckwith-Wiedemann syndrome (ortholog); FOUND IN cell surface (ortholog); clathrin coat (ortholog); early endosome (ortholog) NW_004955439 20754915 20874759 - 102013547 AGCD01036128;AGCD01036129;GBCE01004858;GBCE01004865;XM_013517350 XP_013372804 MODEL 8967107 protein-coding Imp3 IMP U3 small nucleolar ribonucleoprotein 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN Mpp10 complex (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955450 2690814 2692336 + 102026925 AGCD01042395;GBDF01087621;XM_005393505 XP_005393562 MODEL 8986507 pseudo LOC102019339 60S acidic ribosomal protein P1 pseudogene NW_004955578 1064468 1064879 - 102019339 AGCD01075508;XM_005414072;XM_005414073 MODEL 8769777 pseudo LOC102014738 dnaJ homolog subfamily A member 1 pseudogene NW_004955406 25486780 25487964 - 102014738 AGCD01006232 MODEL 8792324 pseudo LOC102007837 28S ribosomal protein S31, mitochondrial pseudogene NW_004955402 45114932 45115802 - 102007837 AGCD01001130 MODEL 8849424 protein-coding Jmy junction mediating and regulatory protein, p53 cofactor ENCODES a protein that exhibits microtubule binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN 'de novo' actin filament nucleation (ortholog); actin polymerization-dependent cell motility (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); FOUND IN autophagosome membrane (ortholog); cell leading edge (ortholog); cytoplasmic vesicle (ortholog) NW_004955425 21800113 21902889 - 102024360 AGCD01025803;AGCD01025804;AGCD01025805;GBBH01052172;GBDJ01134939;XM_013514877 XP_013370331 MODEL 9034222 protein-coding Esr1 estrogen receptor 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); antral ovarian follicle growth (ortholog); baculum development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; follicle-stimulating hormone signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955439 9588631 9953606 - 102028019 AGCD01035840;AGCD01035841;AGCD01035842;AGCD01035843;AGCD01035844;AGCD01035845;AGCD01035846;GBCB01061195;XM_005390573;XM_005390574;XM_013517315 XP_005390630;XP_005390631;XP_013372769 MODEL 39134206 misc_rna 7SK 7SK RNA 8713018 ncrna LOC102024562 uncharacterized LOC102024562 NW_004955416 31688788 31730228 + 102024562 AGCD01017769;GBDF01307972;XR_001233366;XR_001233367;XR_001233368;XR_260450 MODEL 8799099 protein-coding Acer3 alkaline ceramidase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN ceramide catabolic process (ortholog); inflammatory response (ortholog); myelination (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH colon cancer (ortholog); Experimental Colitis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955414 14741027 14846931 - 102012949 AGCD01015156;AGCD01015157;AGCD01015158;AGCD01015159;AGCD01015160;GBCB01075983;GBDF01123305;XM_005379846 XP_005379903 MODEL 8823307 pseudo LOC102012068 ribose-phosphate pyrophosphokinase 1-like NW_004955409 26469788 26470881 - 102012068 AGCD01010186 MODEL 8932846 protein-coding Ciz1 CDKN1A interacting zinc finger protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); positive regulation of DNA-templated DNA replication initiation (ortholog); random inactivation of X chromosome (ortholog); ASSOCIATED WITH dystonia (ortholog); dystonia 23 (ortholog); Ewing sarcoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955570 716124 732551 - 102021494 AGCD01074760;AGCD01074761;GBDF01007463;GBDF01007479;XM_013509385 XP_013364839 MODEL 8926501 pseudo LOC102024565 cryptochrome-1 pseudogene NW_004955480 6962604 6964523 - 102024565 AGCD01056693 MODEL 8944939 protein-coding Grik2 glutamate ionotropic receptor kainate type subunit 2 ENCODES a protein that exhibits extracellularly glutamate-gated ion channel activity (ortholog); glutamate receptor activity (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); chemical synaptic transmission (ortholog); detection of cold stimulus involved in thermoception (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 6 (ortholog); bipolar disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendrite cytoplasm (ortholog) NW_004955411 27096214 27759503 + 102027501 AGCD01012184;AGCD01012185;AGCD01012186;AGCD01012187;AGCD01012188;AGCD01012189;AGCD01012190;AGCD01012191;AGCD01012192;AGCD01012193;AGCD01012194;AGCD01012195;AGCD01012196;AGCD01012197;AGCD01012198;GBBH01106371;XM_005377815;XM_005377816;XM_013510935;XM_013510936 XP_005377872;XP_005377873;XP_013366389;XP_013366390 MODEL 8725604 protein-coding Hsph1 heat shock protein family H (Hsp110) member 1 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN negative regulation of apoptotic signaling pathway (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide (ortholog); negative regulation of p38MAPK cascade (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955431 14680364 14706182 + 102017369 AGCD01030337;AGCD01030338;GBDF01153902;XM_005387734;XM_005387735;XM_013515821;XM_013515822;XM_013515823 XP_005387791;XP_005387792;XP_013371275;XP_013371276;XP_013371277 MODEL 8752232 ncrna LOC102005701 uncharacterized LOC102005701 NW_004955471 8033027 8043382 + 102005701 AGCD01053175;GBDF01122898;XR_263529 MODEL 8987495 protein-coding Dbndd2 dysbindin domain containing 2 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); ERK1 and ERK2 cascade (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); lysosome (ortholog) NW_004955445 11931996 11936534 - 102007713 AGCD01039726;AGCD01039727;GBCB01004423;XM_013518316;XM_013518317 XP_013373770;XP_013373771 MODEL 9024008 pseudo LOC102009346 ribosome biogenesis protein BRX1 homolog pseudogene NW_004955453 6480308 6481349 + 102009346 AGCD01044720 MODEL 9034606 ncrna LOC102011689 uncharacterized LOC102011689 NW_004955511 5972095 5975480 + 102011689 AGCD01066594;XR_264436 MODEL 8821964 pseudo LOC102014372 cytochrome c, somatic pseudogene NW_004955494 1851309 1851695 + 102014372 AGCD01061424 MODEL 9024537 protein-coding Dedd death effector domain containing ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN decidualization (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955468 12885547 12897522 - 102027059 AGCD01052190;AGCD01052191;GBDK01187217;XM_005400238;XM_005400240;XM_005400241;XM_013522357 XP_005400295;XP_005400297;XP_005400298;XP_013377811 MODEL 9052232 protein-coding CUNH21orf58 chromosome unknown C21orf58 homolog NW_004955407 42712152 42728690 - 102019471 AGCD01007895;GBDK01018641;XM_013505741;XM_013505747;XM_013505752;XM_013505756;XM_013505761 XP_013361195;XP_013361201;XP_013361206;XP_013361210;XP_013361215 MODEL 9002418 pseudo LOC102013626 tyrosine-protein phosphatase non-receptor type 2 pseudogene NW_004955497 1815456 1816689 + 102013626 AGCD01062473 MODEL 8735755 protein-coding Eif3l eukaryotic translation initiation factor 3 subunit L ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); viral translational termination-reinitiation (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955413 24220188 24250786 + 102011754 AGCD01014356;AGCD01014357;AGCD01014358;AGCD01014359;GBDF01002141;XM_005379230 XP_005379287 MODEL 39132128 rrna 5S_rRNA 5S ribosomal RNA 8788985 protein-coding Fdft1 farnesyl-diphosphate farnesyltransferase 1 ENCODES a protein that exhibits squalene synthase [NAD(P)H] activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis abuse (ortholog); cataract (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955403 53068011 53081499 + 102003195 AGCD01003032;GBBH01062766;GBCQ01002946;XM_005373829 XP_005373886 MODEL 8922785 ncrna LOC102008965 uncharacterized LOC102008965 NW_004955508 2550384 2643799 + 102008965 AGCD01065788;AGCD01065789;AGCD01065790;AGCD01065791;GBDF01249960;XR_264386 MODEL 8957254 protein-coding LOC102011226 olfactory receptor 10AG1-like NW_004955511 918179 920370 - 102011226 AGCD01066346;XM_005408217 XP_005408274 MODEL 8833190 protein-coding Igfals insulin like growth factor binding protein acid labile subunit ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to growth hormone stimulus (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Acid-Labile Subunit Deficiency (ortholog); anorexia nervosa (ortholog); Burns (ortholog); FOUND IN insulin-like growth factor ternary complex (ortholog) NW_004955442 15469602 15482115 + 102018033 AGCD01037874;AGCD01037875;GBCQ01030842;XM_005391510;XM_005391511;XM_013517676 XP_005391567;XP_005391568;XP_013373130 MODEL 8700901 protein-coding LOC102003877 chromosome unknown open reading frame, human C16orf47 NW_004955484 5772487 5791070 - 102003877 AGCD01058271;XM_005415398 XP_005415455 MODEL 8751752 protein-coding Kcnrg potassium channel regulator ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of delayed rectifier potassium channel activity (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955431 3395920 3402494 + 102012351 AGCD01029964;GBDI01312589;XM_005387892 XP_005387949 MODEL 8738388 protein-coding Anks4b ankyrin repeat and sterile alpha motif domain containing 4B INVOLVED IN brush border assembly (ortholog); protein localization to microvillus (ortholog); protein-containing complex assembly (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum membrane (ortholog); microvillus (ortholog) NW_004955493 429339 439456 + 102006356 AGCD01060851;GBCQ01072081;XM_005405050 XP_005405107 MODEL 9055111 protein-coding LOC102016228 unconventional myosin-XVI NW_004955404 2942714 3296639 - 102016228 AGCD01003266;AGCD01003267;AGCD01003268;AGCD01003269;GBCE01150866;GBDF01187230;XM_013515827 XP_013371281 MODEL 8955413 protein-coding LOC102020351 myb-like protein X NW_004955422 19494472 19511742 + 102020351 AGCD01023011;AGCD01023012;AGCD01023013;GBDI01385675;XM_005384968;XM_013513852 XP_005385025;XP_013369306 MODEL 8970231 protein-coding Imp4 IMP U3 small nucleolar ribonucleoprotein 4 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN Mpp10 complex (ortholog); nucleolus (ortholog); preribosome (ortholog) NW_004955459 30502 33589 + 102012066 AGCD01047923;GBDF01049446;XM_005397541 XP_005397598 MODEL 8763580 protein-coding Bud31 BUD31 spliceosome associated protein ENCODES a protein that exhibits nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH schistosomiasis (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955460 15083472 15092217 + 102009584 AGCD01048768;GBDF01047466;XM_005397944;XM_005397945 XP_005398001;XP_005398002 MODEL 8761450 protein-coding LOC102013981 uncharacterized LOC102013981 NW_004955567 1595757 1628166 + 102013981 AGCD01074484;AGCD01074485;GBDK01330281;XM_013509232 XP_013364686 MODEL 9010567 pseudo LOC102020718 putative 60S ribosomal protein L37a NW_004955439 3641729 3642057 + 102020718 AGCD01035683 MODEL 10090225 pseudo LOC102016603 Ig heavy chain V-III region 23-like NW_004955487 151673 152165 - 102016603 AGCD01059208 MODEL 8961855 protein-coding LOC102009744 lipocalin-1-like NW_004955513 2591903 2597295 + 102009744 AGCD01066882;GBBH01003724;XM_005408420 XP_005408477 MODEL 39134207 misc_rna 7SK 7SK RNA 39133944 misc_rna 7SK 7SK RNA 8785592 protein-coding Ctbp2 C-terminal binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); nuclear retinoic acid receptor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of retinoic acid receptor signaling pathway (ortholog); ASSOCIATED WITH Neoplasm Invasiveness (ortholog); Neoplastic Cell Transformation (ortholog); Prostatic Neoplasms (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955477 2922334 3082088 - 102006028 AGCD01055535;AGCD01055536;AGCD01055537;AGCD01055538;GBBH01119744;XM_005401984;XM_005401985;XM_005401986;XM_013503033 XP_005402041;XP_005402042;XP_005402043;XP_013358487 MODEL 8770314 pseudo LOC102010465 acyl carrier protein, mitochondrial pseudogene NW_004955467 7728117 7728770 - 102010465 AGCD01051438;XM_005399383 MODEL 8707427 protein-coding Ep400 E1A binding protein p400 ENCODES a protein that exhibits chromatin binding (ortholog); protein antigen binding (ortholog); INVOLVED IN gene expression (ortholog); nervous system development (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955482 639316 746331 - 102022599 AGCD01057180;AGCD01057181;AGCD01057182;AGCD01057183;AGCD01057184;AGCD01057185;AGCD01057186;GBCQ01006240;XM_005402961;XM_013503598;XM_013503599;XM_013503600;XM_013503601;XM_013503602;XM_013503603;XM_013503604;XM_013503605;XM_013503606;XM_013503607;XM_013503608 XP_005403018;XP_013359052;XP_013359053;XP_013359054;XP_013359055;XP_013359056;XP_013359057;XP_013359058;XP_013359059;XP_013359060;XP_013359061;XP_013359062 MODEL 8869875 ncrna LOC102021868 uncharacterized LOC102021868 NW_004955413 17831133 17838059 - 102021868 AGCD01014164;GBDF01081370;XR_260086 MODEL 9019464 ncrna LOC102017747 uncharacterized LOC102017747 NW_004955409 1823879 1847047 - 102017747 AGCD01009184;GBDK01374880;XR_259745 MODEL 8968225 protein-coding LOC102012862 2'-5'-oligoadenylate synthase 1-like NW_004955482 9327058 9336478 + 102012862 AGCD01057565;AGCD01081652;GBDI01244959;XM_005403208 XP_005403265 MODEL 9052424 protein-coding Dedd2 death effector domain containing 2 INVOLVED IN apoptotic nuclear changes (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); FOUND IN nucleolus (ortholog) NW_004955555 684523 701915 + 102029013 AGCD01073043;AGCD01073044;GBDF01087679;XM_005412386 XP_005412443 MODEL 9059176 protein-coding Disc1 DISC1 scaffold protein ENCODES a protein that exhibits identical protein binding (ortholog); kinesin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in forebrain (ortholog); cerebral cortex radially oriented cell migration (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Asperger syndrome (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); cell body (ortholog); central region of growth cone (ortholog) NW_004955492 6946528 7239328 - 102005813 AGCD01060775;AGCD01060776;AGCD01060777;AGCD01060778;AGCD01060779;GBDK01247100;XM_013504736 XP_013360190 MODEL 39131874 rrna 5S_rRNA 5S ribosomal RNA 8827187 protein-coding LOC102008214 putative olfactory receptor 52P1 NW_004955414 21691721 21692701 + 102008214 AGCD01015427;XM_005380500 XP_005380557 MODEL 8803635 protein-coding LOC102014739 E3 ubiquitin-protein ligase makorin-1-like NW_004955454 6760246 6768976 - 102014739 AGCD01045268;GBCE01055878;XM_013520217 XP_013375671 MODEL 8948633 protein-coding Grik3 glutamate ionotropic receptor kainate type subunit 3 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); glutamate receptor activity (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN G protein-coupled glutamate receptor signaling pathway (ortholog); glutamate receptor signaling pathway (ortholog); negative regulation of synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN axon (ortholog); cochlear hair cell ribbon synapse (ortholog); dendrite (ortholog) NW_004955452 14719072 14933613 - 102009247 AGCD01044476;AGCD01044477;AGCD01044478;GBBH01052636;XM_005395204;XR_001236122 XP_005395261 MODEL 8700856 protein-coding Aars1 alanyl-tRNA synthetase 1 ENCODES a protein that exhibits alanine-tRNA ligase activity (ortholog); amino acid binding (ortholog); aminoacyl-tRNA deacylase activity (ortholog); INVOLVED IN alanyl-tRNA aminoacylation (ortholog); cerebellar Purkinje cell layer development (ortholog); negative regulation of neuron apoptotic process (ortholog); PARTICIPATES IN alanine metabolic pathway; lactic acidosis pathway; primary hyperoxaluria type 1 pathway; ASSOCIATED WITH adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease axonal type 2N (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955484 3090678 3115224 - 102028968 AGCD01058154;GBCE01054191;XM_005403471;XM_013503929 XP_005403528;XP_013359383 MODEL 8765235 protein-coding Dbnl drebrin like ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN neuron projection morphogenesis (ortholog); podosome assembly (ortholog); postsynaptic actin cytoskeleton organization (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955456 7912827 7924373 - 102024530 AGCD01046435;GBDF01153971;XM_005396684 XP_005396741 MODEL 8753417 protein-coding LOC102009347 translation initiation factor IF-2-like NW_004955406 23881198 23887173 - 102009347 AGCD01006186;GBCQ01162563;XM_005375074;XM_013521722 XP_005375131;XP_013377176 MODEL 8912018 pseudo LOC102015471 deoxynucleotidyltransferase terminal-interacting protein 2 pseudogene NW_004955450 17764164 17765669 - 102015471 AGCD01042884 MODEL 9016095 ncrna LOC102011691 uncharacterized LOC102011691 NW_004955432 22073703 22077752 + 102011691 AGCD01031246;GBDF01194467;XR_001234645 MODEL 9013418 ncrna LOC102015864 uncharacterized LOC102015864 NW_004955425 13450137 13458459 + 102015864 AGCD01025536;GBDJ01355455;XR_261139 MODEL 8843769 protein-coding Anks6 ankyrin repeat and sterile alpha motif domain containing 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); heart development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); Cardiovascular Abnormalities (ortholog); cystic kidney disease (ortholog); FOUND IN ciliary inversin compartment (ortholog) NW_004955419 26801924 26852116 + 102009506 AGCD01020416;AGCD01020417;GBCE01013135;GBDI01117462;XM_013513227 XP_013368681 MODEL 8909546 protein-coding Ache acetylcholinesterase (Cartwright blood group) ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholinesterase activity (ortholog); cholinesterase activity (ortholog); INVOLVED IN acetylcholine catabolic process (ortholog); acetylcholine metabolic process (ortholog); acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine metabolic pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute stress disorder (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN axolemma; dendrite; external side of plasma membrane NW_004955573 79606 85799 + 102008995 AGCD01074960;AGCD01074961;GBBH01208078;XM_005413673;XM_005413675;XM_005413676;XM_013509453;XM_013509454 XP_005413730;XP_005413732;XP_005413733;XP_013364907;XP_013364908 MODEL 8799856 pseudo LOC102008582 adiponectin receptor protein 1 pseudogene NW_004955446 6108606 6109553 - 102008582 AGCD01040087 MODEL 8817467 protein-coding LOC102021128 olfactory receptor 2T1 ASSOCIATED WITH prostate cancer (ortholog) NW_004955418 30198087 30199058 - 102021128 AGCD01019506;XM_005382335 XP_005382392 MODEL 9022207 protein-coding Bysl bystin like INVOLVED IN blastocyst formation (ortholog); cell population proliferation (ortholog); cellular response to forskolin (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); chromosome (ortholog) NW_004955437 8257081 8266627 + 102019200 AGCD01034483;GBDF01090288;XM_005389708 XP_005389765 MODEL 8833593 protein-coding Cramp1 cramped chromatin regulator 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); FOUND IN histone locus body (ortholog) NW_004955442 15563545 15625163 - 102006079 AGCD01037877;GBDK01323276;XM_005391571;XM_005391572;XM_013517674 XP_005391628;XP_005391629;XP_013373128 MODEL 8965312 protein-coding CUNH22orf15 chromosome unknown C22orf15 homolog NW_004955455 8474717 8478840 - 102012731 AGCD01045896;GBBH01228066;XM_005396423;XM_005396424;XM_013520434;XM_013520435;XM_013520436;XM_013520437;XM_013520438 XP_005396480;XP_005396481;XP_013375888;XP_013375889;XP_013375890;XP_013375891;XP_013375892 MODEL 8706244 protein-coding Dsg2 desmoglein 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell adhesion (ortholog); desmosome assembly (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); arrhythmogenic right ventricular dysplasia 10 (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955402 18826400 18876188 + 102024409 AGCD01000541;GBDI01013125;GBDK01278961;XM_005373161 XP_005373218 MODEL 39134208 misc_rna 7SK 7SK RNA 9025380 ncrna LOC102019342 uncharacterized LOC102019342 NW_004955402 25014435 25015928 + 102019342 AGCD01000650;GBDF01055968;XR_259067 MODEL 8937504 protein-coding Ckap2 cytoskeleton associated protein 2 INVOLVED IN microtubule polymerization (ortholog); mitotic cytokinesis (ortholog); negative regulation of microtubule depolymerization (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955431 5416596 5429465 - 102010613 AGCD01030028;AGCD01030029;GBDF01008509;GBDI01161937;XM_013515726 XP_013371180 MODEL 8889839 ncrna LOC102013265 uncharacterized LOC102013265 NW_004955411 20689282 20717825 - 102013265 AGCD01012060;AGCD01012061;GBDF01278033;XR_001232800;XR_001232801;XR_001232802;XR_259939 MODEL 8921651 protein-coding LOC102005702 chromosome unknown open reading frame, human C11orf58 NW_004955414 31621806 31642993 + 102005702 AGCD01015759;GBDF01005761;XM_005380367;XM_005380368 XP_005380424;XP_005380425 MODEL 9046449 protein-coding Ctbs chitobiase ENCODES a protein that exhibits chitinase activity (ortholog); hydrolase activity, acting on glycosyl bonds (ortholog); INVOLVED IN carbohydrate catabolic process (ortholog); chitin catabolic process (ortholog); oligosaccharide catabolic process (ortholog); FOUND IN lysosome (ortholog) NW_004955423 9327945 9343923 + 102030437 AGCD01023657;GBDJ01274029;XM_005385159 XP_005385216 MODEL 9066730 protein-coding LOC102021873 olfactory receptor 52M1-like NW_004955414 20140566 20141519 - 102021873 AGCD01015358;XM_005380465 XP_005380522 MODEL 10208788 ncrna LOC106149980 uncharacterized LOC106149980 NW_004955459 1248910 1282515 - 106149980 AGCD01047965;AGCD01047966;GBDF01224976;XR_001236484 MODEL 8844642 pseudo LOC102003880 transcription initiation factor TFIID subunit 7-like pseudogene NW_004955488 7941790 7996454 + 102003880 AGCD01059698;XM_005404481 MODEL 9064412 ncrna LOC102011229 uncharacterized LOC102011229 NW_004955515 241 57618 - 102011229 AGCD01067170;AGCD01067171;AGCD01067172;AGCD01067173;AGCD01067174;AGCD01067175;AGCD01067176;AGCD01067177;AGCD01067178;AGCD01067179;AGCD01067180;AGCD01067181;GBCE01018606;XR_264517 MODEL 8733895 protein-coding Josd1 Josephin domain containing 1 ENCODES a protein that exhibits deubiquitinase activity (ortholog); INVOLVED IN cell motility (ortholog); endocytosis (ortholog); membrane biogenesis (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955413 24803189 24817150 - 102022904 AGCD01014379;GBCQ01097675;XM_005379269 XP_005379326 MODEL 8974572 protein-coding Esr2 estrogen receptor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN amygdala development (ortholog); behavioral fear response (ortholog); brain development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; tamoxifen pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955466 5587003 5644765 + 102004260 AGCD01050885;GBDF01079691;XM_005399136;XM_013521918 XP_005399193;XP_013377372 MODEL 8767504 protein-coding Def6 DEF6 guanine nucleotide exchange factor INVOLVED IN vesicle-mediated transport to the plasma membrane (ortholog); ASSOCIATED WITH immunodeficiency 87 (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cell-cell junction (ortholog); nucleoplasm (ortholog) NW_004955437 3252028 3275512 + 102025506 AGCD01034301;AGCD01034302;AGCD01034303;GBDK01058120;XM_005389551;XM_013516997 XP_005389608;XP_013372451 MODEL 8985523 ncrna LOC102014373 uncharacterized LOC102014373 NW_004955422 26126942 26154652 + 102014373 AGCD01023278;GBCE01071116;XR_001233946;XR_001233947;XR_001233948;XR_001233949;XR_001233950;XR_001233951;XR_001233952;XR_001233953;XR_001233954;XR_001233955 MODEL 8942995 ncrna LOC102012069 uncharacterized LOC102012069 NW_004955410 7679839 7699275 + 102012069 AGCD01010721;AGCD01010722;GBCE01185810;XR_259825 MODEL 8905957 pseudo LOC102016604 C-Myc-binding protein pseudogene NW_004955489 1308702 1309195 - 102016604 AGCD01059836 MODEL 8901851 pseudo LOC102011694 casein kinase I NW_004955434 9624730 9625478 - 102011694 AGCD01032306;XR_261649 MODEL 8792864 protein-coding Eif3m eukaryotic translation initiation factor 3 subunit M ENCODES a protein that exhibits translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN translation (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) NW_004955476 10594670 10612448 + 102029287 AGCD01055424;AGCD01055425;AGCD01055426;GBDF01043875;XM_005401783;XM_013502983 XP_005401840;XP_013358437 MODEL 8934033 protein-coding Fdps farnesyl diphosphate synthase ENCODES a protein that exhibits (2E,6E)-farnesyl diphosphate synthase activity (ortholog); dimethylallyltranstransferase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Porokeratosis 9, Multiple Types (ortholog); Postmenopausal Osteoporosis (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); peroxisome (ortholog) NW_004955545 1757090 1765028 + 102007154 AGCD01071869;GBDF01119739;XM_005411604;XM_005411605 XP_005411661;XP_005411662 MODEL 9015400 ncrna LOC102021133 uncharacterized LOC102021133 NW_004955488 1440083 1474050 + 102021133 AGCD01059498;GBDF01041490;XR_263995 MODEL 8951256 protein-coding LOC102007838 vomeronasal type-1 receptor 2-like NW_004955603 405739 406635 + 102007838 AGCD01076843;XM_005414838 XP_005414895 MODEL 8733126 ncrna LOC102017748 uncharacterized LOC102017748 NW_004955409 7814743 7821735 - 102017748 AGCD01009366;AGCD01009367;GBDF01207876;XR_001232620;XR_259757 MODEL 8967431 protein-coding Epas1 endothelial PAS domain protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); cobalt ion binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); cell differentiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); azoospermia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955441 13244626 13328220 + 102011250 AGCD01037146;AGCD01037147;AGCD01037148;GBBH01002906;XM_005390973 XP_005391030 MODEL 39131876 rrna 5S_rRNA 5S ribosomal RNA 8909655 protein-coding Igfbp1 insulin like growth factor binding protein 1 ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); positive regulation of cell growth (ortholog); response to insulin (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Burns (ortholog); Colonic Neoplasms (ortholog); FOUND IN extracellular space (ortholog) NW_004955456 6810461 6814944 - 102011954 AGCD01046378;GBCQ01013594;XM_005396640 XP_005396697 MODEL 8989909 ncrna LOC102008215 uncharacterized LOC102008215 NW_004955415 2147670 2175932 + 102008215 AGCD01015895;AGCD01015896;AGCD01015897;AGCD01015898;GBDK01355203;XR_260259 MODEL 8945155 ncrna LOC102014740 uncharacterized LOC102014740 NW_004955454 16803222 16835717 - 102014740 AGCD01045527;AGCD01045528;AGCD01045529;XR_262799;XR_262800 MODEL 8746986 pseudo LOC102013982 vomeronasal type-1 receptor 4-like NW_004955569 807810 808559 + 102013982 AGCD01074620 MODEL 8806967 protein-coding Impa1 inositol monophosphatase 1 ENCODES a protein that exhibits identical protein binding (ortholog); inositol monophosphate 1-phosphatase activity (ortholog); inositol monophosphate phosphatase activity (ortholog); INVOLVED IN phosphate-containing compound metabolic process (ortholog); phosphatidylinositol biosynthetic process (ortholog); signal transduction (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 59 (ortholog); intellectual disability (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955417 14114 40128 - 102023696 AGCD01017781;AGCD01017782;AGCD01017783;AGCD01017784;GBCQ01072950;XM_005381716;XM_013512813;XM_013512814 XP_005381773;XP_013368267;XP_013368268 MODEL 8864054 ncrna LOC102014748 uncharacterized LOC102014748 NW_004955408 22833023 22834873 - 102014748 AGCD01008581;GBDF01293457;XR_259701 MODEL 8926611 protein-coding LOC102008966 olfactory receptor 1030-like NW_004955511 1700555 1701493 - 102008966 AGCD01066377;XM_005407972 XP_005408029 MODEL 9033046 protein-coding LOC102010472 olfactory receptor 688 NW_004955414 21882234 21901979 + 102010472 AGCD01015436;XM_005380504 XP_005380561 MODEL 8796303 pseudo LOC102015866 RNA 3'-terminal phosphate cyclase-like protein pseudogene NW_004955502 7724548 7725670 - 102015866 AGCD01064460 MODEL 9008796 pseudo LOC102012863 FH1/FH2 domain-containing protein 1 pseudogene NW_004955485 3175160 3181031 - 102012863 AGCD01058533 MODEL 9060353 protein-coding Acin1 apoptotic chromatin condensation inducer 1 INVOLVED IN apoptotic chromosome condensation (ortholog); erythrocyte differentiation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); FOUND IN ASAP complex (ortholog); exon-exon junction complex (ortholog); nuclear speck (ortholog) NW_004955409 37206675 37246851 + 102024313 AGCD01010498;AGCD01010499;GBDI01000873;GBDK01005483;XM_005377090 XP_005377147 MODEL 8890713 ncrna LOC102016234 uncharacterized LOC102016234 NW_004955407 25388769 25391467 - 102016234 AGCD01007502;XR_259580 MODEL 8807278 protein-coding Htatip2 HIV-1 Tat interactive protein 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of programmed cell death (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein autophosphorylation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955476 1197053 1219679 + 102006027 AGCD01055201;AGCD01055202;GBDF01306860;XM_005401720;XM_005401721;XM_005401722 XP_005401777;XP_005401778;XP_005401779 MODEL 8827411 protein-coding LOC102020353 olfactory receptor 7G2-like NW_004955495 181711 182661 - 102020353 AGCD01061606;XM_005406116 XP_005406173 MODEL 8800933 protein-coding Ckap2l cytoskeleton associated protein 2 like INVOLVED IN cell division (ortholog); chromosome segregation (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH Filippi syndrome (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); microtubule cytoskeleton (ortholog); mitotic spindle (ortholog) NW_004955470 1552279 1581261 + 102023579 AGCD01052647;AGCD01052648;GBCB01105157;GBDF01087147;XM_013522857 XP_013378311 MODEL 8888627 ncrna LOC102009749 uncharacterized LOC102009749 NW_004955519 2189856 2320813 - 102009749 AGCD01067917;AGCD01067918;AGCD01067919;AGCD01067920;AGCD01067921;AGCD01067922;AGCD01067923;AGCD01067924;GBDK01382059;XR_001231859;XR_001231860;XR_001231861 MODEL 8928098 pseudo LOC102017753 peptidyl-prolyl cis-trans isomerase G pseudogene NW_004955411 11900324 11902482 - 102017753 AGCD01011834 MODEL 9005615 pseudo LOC102013627 60S ribosomal protein L17 pseudogene NW_004955424 15289709 15291262 - 102013627 AGCD01024701 MODEL 39133945 misc_rna 7SK 7SK RNA 8741563 protein-coding Grik4 glutamate ionotropic receptor kainate type subunit 4 ENCODES a protein that exhibits glutamate-gated receptor activity (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955412 21563879 21932292 + 102012940 AGCD01013025;AGCD01013026;AGCD01013027;GBBH01131616;XM_005378354;XM_005378355;XM_013511258;XM_013511259;XM_013511260 XP_005378411;XP_005378412;XP_013366712;XP_013366713;XP_013366714 MODEL 8984968 protein-coding Aars2 alanyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits alanine-tRNA ligase activity (ortholog); peptide lactyltransferase (ATP-dependent) activity (ortholog); INVOLVED IN mitochondrial alanyl-tRNA aminoacylation (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); PARTICIPATES IN alanine metabolic pathway; lactic acidosis pathway; primary hyperoxaluria type 1 pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 8 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955437 9915371 9924886 - 102022744 AGCD01034549;GBDI01179754;XM_005389818;XM_013516840 XP_005389875;XP_013372294 MODEL 8701743 protein-coding LOC102015473 ATP-dependent zinc metalloprotease YME1L1 NW_004955826 3824 15193 - 102015473 AGCD01078430;AGCD01078431;GBDF01051276;XM_005415123;XM_005415125;XM_013510198 XP_005415180;XP_005415182;XP_013365652 MODEL 8942609 ncrna LOC102012071 uncharacterized LOC102012071 NW_004955463 1330958 1377220 - 102012071 AGCD01049509;AGCD01049510;AGCD01049511;AGCD01049512;GBDF01208723;XR_263140 MODEL 8917757 protein-coding LOC102024566 chromosome unknown open reading frame, human C17orf75 INVOLVED IN intracellular protein transport (ortholog); vesicle tethering to Golgi (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); trans-Golgi network (ortholog) NW_004955481 7281735 7293246 - 102024566 AGCD01057058;AGCD01057059;GBBH01001483;XM_005402816;XM_013503453 XP_005402873;XP_013358907 MODEL 8905729 protein-coding LOC102008583 olfactory receptor 2J3-like NW_004955576 1306942 1307865 + 102008583 AGCD01075370;XM_005413944 XP_005414001 MODEL 9013390 ncrna LOC102014376 uncharacterized LOC102014376 NW_004955423 27927653 27931012 + 102014376 AGCD01024142;GBDF01260752;XR_261016 MODEL 8831095 protein-coding Bzw1 basic leucine zipper and W2 domains 1 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955403 676384 688353 - 102003303 AGCD01001704;AGCD01001705;GBDF01009056;XM_005373238;XM_013511843 XP_005373295;XP_013367297 MODEL 8991159 protein-coding Ankub1 ankyrin repeat and ubiquitin domain containing 1 NW_004955448 986177 1008175 - 102021817 AGCD01041246;GBDI01354197;XM_005393004;XM_013518681 XP_005393061;XP_013374135 MODEL 8862477 protein-coding Crat carnitine O-acetyltransferase ENCODES a protein that exhibits acyl-CoA oxidase activity (ortholog); carnitine O-acetyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process, CoA-linked (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Carnitine Acetyltransferase Deficiency (ortholog); neurodegeneration with brain iron accumulation (ortholog); Neurodegeneration with Brain Iron Accumulation 8 (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955570 1417608 1428720 - 102016761 AGCD01074813;GBBH01033930;GBCB01004626;XM_005413615 XP_005413672 MODEL 9043865 ncrna LOC102013267 uncharacterized LOC102013267 NW_004955464 13689362 13696059 + 102013267 AGCD01050291;GBCQ01087996;XR_001236689;XR_263217 MODEL 8727317 protein-coding LOC102005703 double-strand break repair protein MRE11A-like NW_004955414 105311 171913 + 102005703 AGCD01014702;AGCD01014703;AGCD01014704;AGCD01014705;AGCD01014706;GBCE01032230;GBDF01042621;XM_013512034 XP_013367488 MODEL 8952622 protein-coding Kcns1 potassium voltage-gated channel modifier subfamily S member 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of potassium ion transmembrane transport (ortholog); ASSOCIATED WITH intracranial hypertension (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955445 12293394 12299741 + 102004530 AGCD01039750;GBCB01012719;XM_013518244 XP_013373698 MODEL 8768672 ncrna LOC102021134 uncharacterized LOC102021134 NW_004955421 22030147 22041896 - 102021134 AGCD01022127;GBDF01234681;XR_001233868;XR_260806 MODEL 8892792 pseudo LOC102021874 transmembrane protein 50A pseudogene NW_004955415 9946775 9947256 - 102021874 AGCD01016117;XM_005380691 MODEL 8852822 protein-coding Fdx1 ferredoxin 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); cholesterol monooxygenase (side-chain-cleaving) activity (ortholog); electron transfer activity (ortholog); INVOLVED IN adrenal gland development (ortholog); cellular response to cAMP (ortholog); cellular response to epinephrine stimulus (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; ASSOCIATED WITH pancreatitis (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955412 12280900 12312930 + 102014654 AGCD01012816;AGCD01012817;AGCD01012818;GBBH01064220;GBDF01156762;XM_013511103 XP_013366557 MODEL 10209618 ncrna LOC106149981 uncharacterized LOC106149981 NW_004955459 4786821 4823661 + 106149981 AGCD01048030;GBBH01099677;XR_001236485 MODEL 9044736 protein-coding LOC102020721 olfactory receptor 4K15 NW_004955550 403729 404676 - 102020721 AGCD01072499;XM_005412130 XP_005412187 MODEL 8705338 protein-coding Ctc1 CST telomere replication complex component 1 ENCODES a protein that exhibits G-rich strand telomeric DNA binding (ortholog); single-stranded DNA binding (ortholog); telomeric DNA binding (ortholog); INVOLVED IN bone marrow development (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); brain disease (ortholog); calcinosis (ortholog); FOUND IN chromosome, telomeric region (ortholog); CST complex (ortholog); nucleoplasm (ortholog) NW_004955467 8673069 8700730 + 102021327 AGCD01051466;GBDJ01339470;XM_005399422;XM_005399423;XM_005399425 XP_005399479;XP_005399480;XP_005399482 MODEL 8744069 ncrna LOC102009348 uncharacterized LOC102009348 NW_004955455 11123017 11124542 - 102009348 AGCD01045984;GBDF01074169;XR_262855;XR_262856 MODEL 8837438 protein-coding Dbp D-box binding PAR bZIP transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN liver development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) NW_004955559 1915424 1921322 + 102007061 AGCD01073681;AGCD01073682;GBBH01002125;GBDI01015879;XM_013508997 XP_013364451 MODEL 39132133 rrna 5S_rRNA 5S ribosomal RNA 8838524 protein-coding Ckap4 cytoskeleton associated protein 4 ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog); rough endoplasmic reticulum (ortholog) NW_004955405 40277082 40279486 - 102020196 AGCD01005510;GBCE01098483;GBDI01222143;XM_013519036 XP_013374490 MODEL 8932807 protein-coding Josd2 Josephin domain containing 2 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog); FOUND IN cytoplasm (ortholog) NW_004955559 655178 659412 + 102017399 AGCD01073606;GBCQ01035382;XM_005412779;XM_005412780;XM_013509061 XP_005412836;XP_005412837;XP_013364515 MODEL 8715509 protein-coding CUNH22orf23 chromosome unknown C22orf23 homolog NW_004955413 24291712 24300294 - 102012847 AGCD01014360;GBDF01011259;XM_005379234;XM_013511473 XP_005379291;XP_013366927 MODEL 8863979 protein-coding LOC102011696 butyrophilin-like protein 8 NW_004955530 347486 352064 - 102011696 AGCD01069846;GBDF01142616;XM_013507548 XP_013363002 MODEL 8872090 protein-coding LOC102008968 olfactory receptor-like protein OLF2 NW_004955511 826804 827742 + 102008968 AGCD01066344;XM_005408212 XP_005408269 MODEL 8826602 protein-coding LOC102010478 translation initiation factor IF-2-like NW_004955415 26656571 26658785 + 102010478 AGCD01016602;GBDF01082702;XM_013512111 XP_013367565 MODEL 9051090 protein-coding LOC102007845 cadherin-4 NW_004956069 2464 8492 + 102007845 AGCD01078992;GBDF01207475;XM_005415167 XP_005415224 MODEL 8923833 protein-coding Ackr1 atypical chemokine receptor 1 (Duffy blood group) ENCODES a protein that exhibits C-C chemokine binding (ortholog); INVOLVED IN inflammatory response (ortholog); regulation of chemokine production (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Arteriovenous Fistula (ortholog); malaria (ortholog) NW_004955468 10994372 10997434 + 102004267 AGCD01052109;GBDF01130183;XM_005400165 XP_005400222 MODEL 9051881 protein-coding Eif4a1 eukaryotic translation initiation factor 4A1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear stress granule (ortholog); nucleus (ortholog) NW_004955467 9344629 9351028 - 102008300 AGCD01051497;AGCD01051498;GBBH01001623;XM_013522083 XP_013377537 MODEL 8791097 pseudo LOC102011231 heterogeneous nuclear ribonucleoprotein F-like NW_004955516 4862856 4863984 - 102011231 AGCD01067538 MODEL 39131877 rrna 5S_rRNA 5S ribosomal RNA 8798300 ncrna LOC102008216 uncharacterized LOC102008216 NW_004955474 1145810 1151690 + 102008216 AGCD01054239;GBDJ01195565;XR_001230733 MODEL 8727623 protein-coding LOC102016240 olfactory receptor 6C4-like NW_004955458 2914387 2916726 - 102016240 AGCD01047255;XM_005397247;XM_013520813 XP_005397304;XP_013376267 MODEL 9047487 pseudo LOC102013992 DCN1-like protein 1 pseudogene NW_004955403 2970789 2975016 - 102013992 AGCD01001743 MODEL 8734345 protein-coding Htatsf1 HIV-1 Tat specific factor 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); poly-ADP-D-ribose modification-dependent protein binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); mRNA splicing, via spliceosome (ortholog); protein localization to site of double-strand break (ortholog); FOUND IN nucleoplasm (ortholog); site of double-strand break (ortholog); U2-type spliceosomal complex (ortholog) NW_004955489 8607649 8622044 - 102013092 AGCD01060020;AGCD01060021;GBBH01229626;GBDI01223809;XM_005404589 XP_005404646 MODEL 39134209 misc_rna 7SK 7SK RNA 8898293 protein-coding Disp1 dispatched RND transporter family member 1 ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); diaphragm development (ortholog); dorsal/ventral pattern formation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH esophageal atresia (ortholog); gastrointestinal stromal tumor (ortholog); holoprosencephaly (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955520 1591831 1711871 - 102014480 AGCD01068059;AGCD01068060;GBDF01195981;XM_005409242;XM_005409243;XM_005409244;XM_005409246;XM_013507055;XM_013507056 XP_005409299;XP_005409300;XP_005409301;XP_005409303;XP_013362509;XP_013362510 MODEL 39133946 misc_rna 7SK 7SK RNA 8928041 pseudo LOC102013629 elongation factor 1-alpha 1-like NW_004955503 7106308 7167094 + 102013629 AGCD01064779;AGCD01064780;AGCD01064781;AGCD01064782;AGCD01064783 MODEL 8924950 ncrna LOC102012073 uncharacterized LOC102012073 NW_004955464 5894847 5895631 - 102012073 AGCD01050015;GBDF01046163;XR_001236693;XR_263202;XR_263203 MODEL 8708504 protein-coding LOC102015474 CSC1-like protein 1 NW_004956265 355 5982 - 102015474 AGCD01079347;GBBH01033680;GBDK01145453;XM_005415187 XP_005415244 MODEL 8969526 protein-coding Dsg3 desmoglein 3 ENCODES a protein that exhibits protein dimerization activity (ortholog); INVOLVED IN actin filament organization (ortholog); adherens junction assembly (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH BLISTERING, ACANTHOLYTIC, OF ORAL AND LARYNGEAL MUCOSA (ortholog); pemphigus vulgaris (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955402 18781511 18811675 + 102017724 AGCD01000540;GBDI01022621;XM_005372742;XM_013506734 XP_005372799;XP_013362188 MODEL 8750629 pseudo LOC102015867 la-related protein 4 pseudogene NW_004955503 7794873 7799158 - 102015867 AGCD01064799 MODEL 8975448 protein-coding LOC102012865 olfactory receptor 4C12-like NW_004955422 140434 143718 - 102012865 AGCD01022395;XM_005383937 XP_005383994 MODEL 8897082 protein-coding Aasdh aminoadipate-semialdehyde dehydrogenase INVOLVED IN amino acid activation for nonribosomal peptide biosynthetic process (ortholog); beta-alanine metabolic process (ortholog) NW_004955447 14623532 14648121 + 102007828 AGCD01041017;AGCD01041018;GBBH01082256;GBCB01131679;XM_013518497 XP_013373951 MODEL 8912073 protein-coding Disp2 dispatched RND transporter family member 2 NW_004955416 7282048 7297896 + 102019166 AGCD01016971;GBDF01021438;XM_005381233 XP_005381290 MODEL 8940122 protein-coding LOC102008972 uncharacterized LOC102008972 NW_004955515 4155520 4227819 - 102008972 AGCD01067316;AGCD01067317;GBCE01099088;XM_013506861 XP_013362315 MODEL 8816883 protein-coding Epb41 erythrocyte membrane protein band 4.1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); actin binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); protein-containing complex assembly (ortholog); regulation of calcium ion transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Elliptocytosis 1 (ortholog); genetic disease (ortholog); hemolytic anemia (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell cortex (ortholog); cortical cytoskeleton (ortholog) NW_004955452 7930095 8123165 + 102021512 AGCD01044202;AGCD01044203;AGCD01044204;AGCD01044205;AGCD01044206;AGCD01044207;AGCD01044208;AGCD01044209;GBBH01033044;XM_005394970;XM_013519473;XM_013519474;XM_013519475;XM_013519476;XM_013519477;XM_013519478 XP_005395027;XP_013374927;XP_013374928;XP_013374929;XP_013374930;XP_013374931;XP_013374932 MODEL 8704332 pseudo LOC102009750 H-2 class II histocompatibility antigen, E-S beta chain pseudogene NW_004955433 10616032 10617329 + 102009750 AGCD01031633 MODEL 8989903 protein-coding LOC102007848 olfactory receptor 4D1-like NW_004955451 4849254 4855277 - 102007848 AGCD01043143;AGCD01043144;GBDF01064574;XM_005394585 XP_005394642 MODEL 8783038 protein-coding Def8 differentially expressed in FDCP 8 homolog INVOLVED IN lysosome localization (ortholog); positive regulation of bone resorption (ortholog); positive regulation of ruffle assembly (ortholog) NW_004955541 3412534 3424010 + 102019640 AGCD01071445;AGCD01071446;GBCB01074199;GBDK01015063;XM_005411072;XM_005411073 XP_005411129;XP_005411130 MODEL 10341850 ncrna LOC106149982 uncharacterized LOC106149982 NW_004955459 581712 585247 + 106149982 AGCD01047940;GBCB01122068;XR_001236486 MODEL 8881432 protein-coding LOC102016607 transmembrane protein 180 NW_004955493 1004258 1056219 + 102016607 AGCD01060874;AGCD01060875;AGCD01060876;AGCD01060877;GBDF01080127;XM_005405084;XM_013504850 XP_005405141;XP_013360304 MODEL 8976223 protein-coding Impa2 inositol monophosphatase 2 ENCODES a protein that exhibits inositol monophosphate 1-phosphatase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN response to lithium ion (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); endometriosis (ortholog); Febrile Seizures (ortholog); FOUND IN cytoplasm (ortholog) NW_004955402 1119376 1143589 - 102015360 AGCD01000048;GBDI01175847;XM_005372574 XP_005372631 MODEL 8968359 ncrna LOC102019343 uncharacterized LOC102019343 NW_004955450 1860097 1867224 + 102019343 AGCD01042371;GBDF01194629;XR_262521 MODEL 8701672 protein-coding LOC102009351 olfactory receptor 1361-like NW_004955408 1568710 1569651 + 102009351 AGCD01007965;XM_005376033 XP_005376090 MODEL 8952308 protein-coding Ackr2 atypical chemokine receptor 2 ENCODES a protein that exhibits C-C chemokine binding (ortholog); C-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN signal transduction (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955420 27990786 28020203 - 102019920 AGCD01021466;AGCD01021467;GBCQ01038701;XM_005383509;XM_005383510;XM_005383513;XM_005383517;XM_005383518;XM_005383520;XM_005383521;XM_005383522;XM_005383523;XM_005383524;XM_005383525;XM_005383526;XM_005383527;XM_013513597;XM_013513598;XM_013513599;XM_013513600;XM_013513601;XM_013513602 XP_005383566;XP_005383567;XP_005383570;XP_005383574;XP_005383575;XP_005383577;XP_005383578;XP_005383579;XP_005383580;XP_005383581;XP_005383582;XP_005383583;XP_005383584;XP_013369051;XP_013369052;XP_013369053;XP_013369054;XP_013369055;XP_013369056 MODEL 8922302 pseudo LOC102016241 retinol dehydrogenase 16-like NW_004955458 4555322 4561003 - 102016241 AGCD01047418 MODEL 8820479 protein-coding LOC102014749 17-beta-hydroxysteroid dehydrogenase type 6-like NW_004955458 4310003 4365000 + 102014749 AGCD01047404;AGCD01047405;AGCD01047406;AGCD01047407;AGCD01047408;AGCD01047409;AGCD01047410;GBCQ01008982;XM_005397332 XP_005397389 MODEL 8897957 ncrna LOC102008217 uncharacterized LOC102008217 NW_004955474 7214695 7216543 - 102008217 AGCD01054516;GBDF01280192;XR_263600 MODEL 8827863 protein-coding LOC102003881 olfactory receptor-like protein OLF3 NW_004955491 257421 258371 + 102003881 AGCD01060325;XM_005404721 XP_005404778 MODEL 8886798 protein-coding CUNH22orf31 chromosome unknown C22orf31 homolog NW_004955455 3290397 3302619 - 102024977 AGCD01045620;AGCD01045621;GBCE01031667;XM_013520305 XP_013375759 MODEL 8944025 ncrna LOC102012074 uncharacterized LOC102012074 NW_004955411 18978377 19015927 - 102012074 AGCD01012029;AGCD01012030;GBDF01115149;XR_259938 MODEL 8900039 pseudo LOC102011704 CCA tRNA nucleotidyltransferase 1, mitochondrial-like NW_004955444 8744286 8760868 + 102011704 AGCD01038945 MODEL 8868588 pseudo LOC102005705 selenoprotein T pseudogene NW_004955474 8104963 8107680 + 102005705 AGCD01054542 MODEL 9043342 pseudo LOC102020355 prefoldin subunit 4 pseudogene NW_004955500 8267493 8270378 - 102020355 AGCD01063985;AGCD01063986 MODEL 9050083 protein-coding Crb1 crumbs cell polarity complex component 1 INVOLVED IN blood vessel remodeling (ortholog); cellular response to light stimulus (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH bestrophinopathy (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) NW_004955406 33817754 34005937 + 102025432 AGCD01006488;AGCD01006489;AGCD01006490;AGCD01006491;AGCD01006492;AGCD01006493;AGCD01006494;GBDF01029707;XM_005375121;XM_005375122;XM_013521884 XP_005375178;XP_005375179;XP_013377338 MODEL 8773662 protein-coding Igfbp2 insulin like growth factor binding protein 2 ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); female pregnancy (ortholog); osteoblast differentiation (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); contact dermatitis (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955453 16556873 16584737 - 102022252 AGCD01044905;AGCD01044906;AGCD01044907;GBCQ01008031;GBDI01223674;XM_013519997 XP_013375451 MODEL 8849101 protein-coding LOC102015868 leukocyte surface antigen CD47-like NW_004955427 9219807 9252882 + 102015868 AGCD01027095;GBDF01156224;XM_005386355;XM_005386356;XM_005386357;XM_005386358;XR_261250 XP_005386412;XP_005386413;XP_005386414;XP_005386415 MODEL 8774521 ncrna LOC102010491 uncharacterized LOC102010491 NW_004955486 2457928 2464475 + 102010491 AGCD01058997;GBDF01144358;XR_263941 MODEL 8740188 protein-coding Ctcf CCCTC-binding factor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin insulator sequence binding (ortholog); chromatin loop anchoring activity (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); chromatin looping (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 21 (ortholog); basal cell carcinoma (ortholog); breast cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome (ortholog); dense fibrillar component (ortholog) NW_004955484 9041226 9092924 - 102027306 AGCD01058404;AGCD01058405;GBDK01184696;XM_005403639;XM_005403640;XM_013503946;XM_013503947 XP_005403696;XP_005403697;XP_013359400;XP_013359401 MODEL 8746034 protein-coding Dbt dihydrolipoamide branched chain transacylase E2 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); maple syrup urine disease (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955435 4975664 5005126 - 102004512 AGCD01032868;GBCE01089296;GBCQ01065544;XM_005388795 XP_005388852 MODEL 8911773 protein-coding Grik5 glutamate ionotropic receptor kainate type subunit 5 ENCODES a protein that exhibits glutamate receptor activity (ortholog); glutamate-gated receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); chemical synaptic transmission (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Experimental Seizures (ortholog); Reperfusion Injury (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955555 804907 865395 + 102003699 AGCD01073049;AGCD01073050;AGCD01073051;GBCE01044985;GBDF01253614;XM_005412394;XM_005412395 XP_005412451;XP_005412452 MODEL 8721762 pseudo LOC102008585 U6 snRNA-associated Sm-like protein LSm3 pseudogene NW_004955583 83314 85152 - 102008585 AGCD01075793 MODEL 8918811 protein-coding Ckap5 cytoskeleton associated protein 5 ENCODES a protein that exhibits microtubule binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); centrosome cycle (ortholog); cytoplasmic translation (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Chromosomal Instability (ortholog); prostate cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955422 1266686 1354323 + 102007444 AGCD01022452;AGCD01022453;AGCD01022454;AGCD01022455;AGCD01022456;GBBH01163556;GBDF01049537;XM_013514063 XP_013369517 MODEL 8998876 ncrna LOC102014383 uncharacterized LOC102014383 NW_004955510 6150370 6155253 - 102014383 AGCD01066303;GBDF01075000;XR_264410 MODEL 8965628 protein-coding Htr1a 5-hydroxytryptamine receptor 1A ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); behavioral fear response (ortholog); behavioral response to nicotine (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN axon hillock (ortholog); GABA-ergic synapse (ortholog); neuronal cell body (ortholog) NW_004955446 4913181 4917726 + 102023540 AGCD01040050;XM_005392639 XP_005392696 MODEL 8949714 protein-coding Esrp1 epithelial splicing regulatory protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 109 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 10813831 10881238 + 102027070 AGCD01018096;AGCD01018097;AGCD01018098;AGCD01018099;AGCD01018100;AGCD01018101;AGCD01018102;AGCD01018103;AGCD01018104;AGCD01018105;GBCE01186588;GBDI01133147;XM_005381812;XM_005381813;XM_005381816;XM_005381817 XP_005381869;XP_005381870;XP_005381873;XP_005381874 MODEL 8844345 ncrna LOC102021139 uncharacterized LOC102021139 NW_004955422 24901333 24901841 - 102021139 AGCD01023238;GBDF01220853;XR_260909 MODEL 9013611 ncrna LOC102021878 uncharacterized LOC102021878 NW_004955418 1272614 1293248 - 102021878 AGCD01018714;GBDF01122696;XR_260535 MODEL 8952842 protein-coding Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 ENCODES a protein that exhibits catalytic activity, acting on a tRNA (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955453 14196728 14204344 - 102015801 AGCD01044859;GBBH01140731;XM_005395563;XM_005395566;XM_005395567;XM_013519851 XP_005395620;XP_005395623;XP_005395624;XP_013375305 MODEL 8756274 ncrna LOC102013274 uncharacterized LOC102013274 NW_004955413 15656502 15680187 + 102013274 AGCD01014081;AGCD01014082;AGCD01014083;AGCD01014084;GBDI01191119;XR_001232941;XR_260081 MODEL 8971175 protein-coding Bzw2 basic leucine zipper and W2 domains 2 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955410 19833008 19874647 + 102022680 AGCD01011031;GBDI01063049;XM_005377337 XP_005377394 MODEL 8872806 pseudo LOC102009352 DCN1-like protein 5 pseudogene NW_004955456 8139806 8140820 + 102009352 AGCD01046454 MODEL 8833959 pseudo LOC102017756 ADP-ribosylation factor 1-like NW_004955467 8516546 8517706 + 102017756 AGCD01051452 MODEL 8862293 protein-coding Kcns2 potassium voltage-gated channel modifier subfamily S member 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of potassium ion transmembrane transport (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955417 14076494 14081556 + 102010803 AGCD01018196;XM_005381849 XP_005381906 MODEL 8777207 ncrna LOC102020722 uncharacterized LOC102020722 NW_004955442 10157723 10165966 - 102020722 AGCD01037700;GBDI01368636;XR_262134 MODEL 8864543 protein-coding Eif4a2 eukaryotic translation initiation factor 4A2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of RNA-dependent RNA polymerase activity (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Neoplasm Metastasis (ortholog); neurodevelopmental disorder with hypotonia and speech delay (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955420 20967848 20974093 - 102028639 AGCD01021117;AGCD01021118;GBDF01010972;XM_005415364 XP_005415421 MODEL 8751717 protein-coding LOC102011232 liver carboxylesterase 1-like NW_004955433 13570134 13598314 - 102011232 AGCD01031695;AGCD01031696;GBCQ01034315;XM_005388340;XM_005388341 XP_005388397;XP_005388398 MODEL 8986972 ncrna LOC102013993 uncharacterized LOC102013993 NW_004955403 11680087 11685223 - 102013993 AGCD01001958;GBBH01086932;XR_259171 MODEL 10346798 ncrna LOC106149983 uncharacterized LOC106149983 NW_004955459 3077389 3092788 + 106149983 AGCD01048007;XR_001236487 MODEL 8773422 protein-coding Igfbp3 insulin like growth factor binding protein 3 ENCODES a protein that exhibits fibronectin binding (ortholog); insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); female pregnancy (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular space (ortholog); heterochromatin (ortholog); insulin-like growth factor binary complex (ortholog) NW_004955456 6795560 6802147 + 102007408 AGCD01046378;GBCE01001939;GBDF01052670;XM_013520639 XP_013376093 MODEL 9019509 protein-coding Jph1 junctophilin 1 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN muscle organ development (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease axonal type 2K (ortholog); congenital myopathy (ortholog); Congenital myopathy 25 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); junctional membrane complex (ortholog) NW_004955444 6108312 6176430 + 102019445 AGCD01038851;AGCD01038852;AGCD01038853;AGCD01038854;GBDF01277952;GBDK01318636;XM_013518218;XM_013518219;XM_013518220 XP_013373672;XP_013373673;XP_013373674 MODEL 8755527 pseudo LOC102009751 pre-mRNA-splicing factor RBM22 pseudogene NW_004955434 8957904 8962702 + 102009751 AGCD01032281;AGCD01032282 MODEL 39133947 misc_rna 7SK 7SK RNA 8862284 protein-coding LOC102010492 zinc finger protein 660 NW_004955420 26897949 26926759 - 102010492 AGCD01021435;GBDF01039917;XM_005383479;XM_013513416;XM_013513417;XM_013513418;XM_013513419;XM_013513420;XM_013513421;XM_013513422;XM_013513423 XP_005383536;XP_013368870;XP_013368871;XP_013368872;XP_013368873;XP_013368874;XP_013368875;XP_013368876;XP_013368877 MODEL 8822671 protein-coding LOC102014751 dehydrogenase/reductase SDR family member 4 NW_004955409 36341756 36353911 - 102014751 AGCD01010456;GBDJ01145997;XM_005377056 XP_005377113 MODEL 8794738 pseudo LOC102012868 ubiquitin-like modifier-activating enzyme 1 pseudogene NW_004955494 8277150 8278221 - 102012868 AGCD01061582 MODEL 8731340 protein-coding LOC102003886 olfactory receptor 4X1-like NW_004955422 269162 270091 - 102003886 AGCD01022401;XM_005384932 XP_005384989 MODEL 9021656 protein-coding Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase ENCODES a protein that exhibits holo-[acyl-carrier-protein] synthase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); protein maturation (ortholog); FOUND IN cytosol (ortholog) NW_004955412 8723828 8747684 + 102027624 AGCD01012722;GBBH01093348;XM_005378020 XP_005378077 MODEL 39131878 rrna 5S_rRNA 5S ribosomal RNA 39132134 rrna 5S_rRNA 5S ribosomal RNA 8739337 ncrna LOC102005707 uncharacterized LOC102005707 NW_004955478 5365809 5429517 + 102005707 AGCD01055871;AGCD01055872;GBDF01254563;XR_001230866;XR_263698 MODEL 8833772 protein-coding LOC102012075 cytochrome P450 4A6-like NW_004955464 11526301 11537560 + 102012075 AGCD01050155;GBBH01214054;XM_005398648;XM_013521715 XP_005398705;XP_013377169 MODEL 9006213 protein-coding Disp3 dispatched RND transporter family member 3 INVOLVED IN negative regulation of neuron differentiation (ortholog); positive regulation of lipid metabolic process (ortholog); positive regulation of neural precursor cell proliferation (ortholog); FOUND IN cytoplasm (ortholog) NW_004955486 2290413 2335193 - 102010164 AGCD01058995;GBDJ01220566;XM_005404001 XP_005404058 MODEL 8991785 protein-coding Crb2 crumbs cell polarity complex component 2 ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN circulatory system development (ortholog); establishment of cell polarity (ortholog); ingression involved in gastrulation with mouth forming second (ortholog); ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); focal segmental glomerulosclerosis 9 (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) NW_004955419 4604883 4626675 - 102020249 AGCD01019760;AGCD01019761;AGCD01019762;GBCQ01174524;XM_005382918 XP_005382975 MODEL 8793311 protein-coding LOC102017758 apolipoprotein L3-like NW_004955413 22826454 22837555 - 102017758 AGCD01014317;GBBH01091386;XM_005379156 XP_005379213 MODEL 8947618 protein-coding LOC102016611 uncharacterized LOC102016611 NW_004955494 2442852 2445128 + 102016611 AGCD01061437;GBBH01068120;XM_005405408 XP_005405465 MODEL 9053416 ncrna LOC102007849 uncharacterized LOC102007849 NW_004955452 2488589 2501328 + 102007849 AGCD01043896;GBDJ01336024;XR_001236017 MODEL 8936901 protein-coding Defb1 defensin beta 1 NW_004955403 53844759 53854329 + 102006735 AGCD01003077;GBDK01143936;XM_005373839 XP_005373896 MODEL 9026647 protein-coding Epb41l1 erythrocyte membrane protein band 4.1 like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 11 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); intellectual disability (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955422 25338135 25456376 - 102028431 AGCD01023248;AGCD01023249;AGCD01023250;GBCE01186960;XM_005384755;XM_005384756;XM_005384758;XM_005384760;XM_013514214;XM_013514215;XM_013514216 XP_005384812;XP_005384813;XP_005384815;XP_005384817;XP_013369668;XP_013369669;XP_013369670 MODEL 8890541 ncrna LOC102013630 uncharacterized LOC102013630 NW_004955504 2770536 2808486 - 102013630 AGCD01064860;AGCD01064861;XR_001231542;XR_264290;XR_264291 MODEL 8921997 protein-coding Dsg4 desmoglein 4 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell-cell adhesion (ortholog); hair follicle development (ortholog); ASSOCIATED WITH alopecia (ortholog); genetic disease (ortholog); hypotrichosis (ortholog); FOUND IN desmosome (ortholog) NW_004955402 18724959 18754232 + 102024074 AGCD01000537;AGCD01000538;XM_005373160 XP_005373217 MODEL 8823222 protein-coding LOC102008222 olfactory receptor 50-like NW_004955419 5484750 5485697 - 102008222 AGCD01019814;XM_005382529 XP_005382586 MODEL 9043208 ncrna LOC102015483 uncharacterized LOC102015483 NW_004955409 5938745 5953096 + 102015483 AGCD01009328;AGCD01009329;GBDK01220228;XR_001232610 MODEL 8910161 protein-coding Fdx2 ferredoxin 2 ENCODES a protein that exhibits electron transfer activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH mitochondrial myopathy (ortholog); Multiple mitochondrial dysfunctions syndrome 8 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955495 1590493 1594760 - 102003252 AGCD01061704;GBBH01143656;XM_005405590 XP_005405647 MODEL 8771272 protein-coding Ackr3 atypical chemokine receptor 3 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); endosome (ortholog) NW_004955453 195346 218034 - 102025429 AGCD01044586;AGCD01044587;AGCD01044588;GBCE01032564;XM_005395313 XP_005395370 MODEL 8748320 protein-coding Ckb creatine kinase B ENCODES a protein that exhibits creatine kinase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to wortmannin (ortholog); cerebellum development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); mitochondrion (ortholog) NW_004955538 2379868 2380771 - 102017056 AGCD01071123;GBCQ01000449;GBDI01007602;XM_013507840 XP_013363294 MODEL 9022862 pseudo LOC102014385 epithelial cell adhesion molecule pseudogene NW_004955430 2266262 2269903 + 102014385 AGCD01029162 MODEL 8787743 protein-coding CUNH22orf39 chromosome unknown C22orf39 homolog INVOLVED IN negative regulation of long-term synaptic potentiation (ortholog); regulation of synaptic plasticity (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog); synaptic cleft (ortholog) NW_004955442 18570867 18575809 + 102008776 AGCD01038010;GBCB01112046;XM_005391778;XM_013517637 XP_005391835;XP_013373091 MODEL 8757412 ncrna LOC102011707 uncharacterized LOC102011707 NW_004955446 1115766 1138545 - 102011707 AGCD01039953;GBDF01181940;XR_262364 MODEL 9000083 pseudo LOC102008973 translationally-controlled tumor protein pseudogene NW_004955516 2157659 2158275 + 102008973 AGCD01067449 MODEL 8783807 protein-coding LOC102021880 olfactory receptor 1J4-like NW_004955419 5304875 5305914 - 102021880 AGCD01019801;XM_005382919 XP_005382976 MODEL 9005109 ncrna LOC102024567 uncharacterized LOC102024567 NW_004955418 19565708 19587079 + 102024567 AGCD01019196;GBCQ01122903;XR_260573 MODEL 9048590 protein-coding LOC102012872 olfactory receptor 1I1 NW_004955495 8171204 8172145 - 102012872 AGCD01062187;XM_005406096 XP_005406153 MODEL 39134210 misc_rna 7SK 7SK RNA 9025334 pseudo LOC102015870 uncharacterized LOC102015870 NW_004955427 4501834 4576758 - 102015870 AGCD01026965;AGCD01026966;AGCD01026967;AGCD01026968;AGCD01026969;AGCD01026970 MODEL 8943561 protein-coding Htr1b 5-hydroxytryptamine receptor 1B ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); bone remodeling (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); amphetamine abuse (ortholog); Anorexia (ortholog); FOUND IN calyx of Held (ortholog); cytoplasm (ortholog); G protein-coupled serotonin receptor complex (ortholog) NW_004955502 5640919 5646899 - 102003673 AGCD01064373;GBDJ01224445;XM_005406899;XR_264265 XP_005406956 MODEL 8989934 protein-coding Impact impact RWD domain protein ENCODES a protein that exhibits actin binding (ortholog); protein sequestering activity (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); intracellular signal transduction (ortholog); FOUND IN cytoplasm (ortholog) NW_004955402 12752748 12781238 + 102010754 AGCD01000403;GBCB01110995;XM_005372721;XM_013504956 XP_005372778;XP_013360410 MODEL 8821720 protein-coding Ctcfl CCCTC-binding factor like ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone binding (ortholog); INVOLVED IN establishment of protein localization to chromatin (ortholog); genomic imprinting (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955445 1944845 1969502 + 102003913 AGCD01039347;GBDF01278023;XM_005392251;XM_005392252 XP_005392308;XP_005392309 MODEL 8897956 pseudo LOC102007851 cyclin-G1 pseudogene NW_004955404 47890555 47891422 - 102007851 AGCD01004488 MODEL 8980825 ncrna LOC102008587 uncharacterized LOC102008587 NW_004955450 5676012 5702239 + 102008587 AGCD01042508;AGCD01042509;GBDF01280526;XR_001235879;XR_262532 MODEL 9033659 protein-coding Grin1 glutamate ionotropic receptor NMDA type subunit 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN basolateral plasma membrane; neuronal cell body; cell surface (ortholog) NW_004955513 5154864 5178636 + 102005740 AGCD01066961;GBDF01032862;XM_005408585;XM_005408586;XM_005408587;XM_005408588;XM_005408589;XM_005408590;XM_005408591;XM_005408592;XR_264481 XP_005408642;XP_005408643;XP_005408644;XP_005408645;XP_005408646;XP_005408647;XP_005408648;XP_005408649 MODEL 8871207 protein-coding LOC102009752 glutathione S-transferase Mu 2 NW_004955435 13200085 13206236 + 102009752 AGCD01033197;GBCQ01122645;XM_013516459;XM_013516460 XP_013371913;XP_013371914 MODEL 8958786 protein-coding Dsn1 DSN1 component of MIS12 kinetochore complex INVOLVED IN skeletal muscle satellite cell proliferation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN fibrillar center (ortholog); kinetochore (ortholog); MIS12/MIND type complex (ortholog) NW_004955422 24876340 24896435 + 102021359 AGCD01023238;GBDF01052835;XM_005384734;XM_005384736;XM_013514023 XP_005384791;XP_005384793;XP_013369477 MODEL 9001856 pseudo LOC102020359 40S ribosomal protein S2 pseudogene NW_004955428 23371700 23372590 - 102020359 AGCD01028222 MODEL 8974723 ncrna LOC102009353 uncharacterized LOC102009353 NW_004955408 30404465 30505925 + 102009353 AGCD01008807;AGCD01008808;AGCD01008809;GBDI01286730;XR_001231749;XR_001231750;XR_259727 MODEL 8829884 protein-coding Esrp2 epithelial splicing regulatory protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH cleft lip (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8426453 8433902 + 102012434 AGCD01058383;GBCQ01177080;XM_005403591 XP_005403648 MODEL 8794244 protein-coding LOC102019345 formin-like protein 16 NW_004955450 7449780 7452569 - 102019345 AGCD01042538;GBDK01081219;XM_005393672 XP_005393729 MODEL 8748420 protein-coding Eif4a3 eukaryotic translation initiation factor 4A3 ENCODES a protein that exhibits ATP binding (ortholog); mRNA binding (ortholog); poly(A) binding (ortholog); INVOLVED IN associative learning (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to selenite ion (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); pancreatic cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955506 2749534 2760873 + 102021264 AGCD01065301;GBDF01005806;XM_005407330 XP_005407387 MODEL 8843411 protein-coding LOC102020725 proline dehydrogenase 1, mitochondrial NW_004955442 17816581 17835636 - 102020725 AGCD01037986;GBDF01118904;XM_005391721;XM_013517945 XP_005391778;XP_013373399 MODEL 9033717 protein-coding Kcns3 potassium voltage-gated channel modifier subfamily S member 3 ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955469 675032 727666 + 102008083 AGCD01052233;AGCD01052234;GBBH01183515;GBDK01004254;XM_005400330;XM_013522671 XP_005400387;XP_013378125 MODEL 8819606 protein-coding LOC102011234 40S ribosomal protein S17-like NW_004955523 399503 400042 - 102011234 AGCD01068454;GBDJ01263809;XM_013507145 XP_013362599 MODEL 8750196 protein-coding Dbx1 developing brain homeobox 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ventral spinal cord interneuron specification (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog) NW_004955476 1018715 1022648 - 102005463 AGCD01055200;XM_005401719 XP_005401776 MODEL 8989561 protein-coding Dixdc1 DIX domain containing 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in forebrain (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955412 13640693 13713926 + 102021643 AGCD01012843;AGCD01012844;GBDK01318184;XM_005378089;XM_005378092;XM_005378093;XM_005378094;XM_013511056;XM_013511057;XM_013511058;XM_013511059 XP_005378146;XP_005378149;XP_005378150;XP_005378151;XP_013366510;XP_013366511;XP_013366512;XP_013366513 MODEL 8856906 ncrna LOC102012076 uncharacterized LOC102012076 NW_004955412 13025707 13029033 - 102012076 AGCD01012827;GBDF01049222;XR_259987 MODEL 39131541 protein-coding IGFBP4 insulin like growth factor binding protein 4 8789403 pseudo LOC102017760 ribosome production factor 2 homolog pseudogene NW_004955414 220864 222594 + 102017760 AGCD01014711 MODEL 8793229 protein-coding Defb110 defensin beta 110 NW_004955411 7949371 7958604 + 102013592 AGCD01011713;XM_005377927 XP_005377984 MODEL 8914555 ncrna LOC102003895 uncharacterized LOC102003895 NW_004955429 23679053 23685472 + 102003895 AGCD01029078;GBDF01277697;XR_001234522;XR_261397 MODEL 8733591 pseudo LOC102010496 normal mucosa of esophagus-specific gene 1 protein pseudogene NW_004955421 23376672 23380513 - 102010496 AGCD01022183 MODEL 8726778 pseudo LOC102014755 B-cell CLL/lymphoma 7 protein family member C pseudogene NW_004955411 3209581 3210469 - 102014755 AGCD01011541 MODEL 8928119 protein-coding LOC102021141 calcium-activated chloride channel regulator 4-like NW_004955423 7486534 7520539 - 102021141 AGCD01023603;GBDF01126331;XM_005385127 XP_005385184 MODEL 39131879 rrna 5S_rRNA 5S ribosomal RNA 8778983 protein-coding Anln anillin actin binding protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); mitotic cytokinesis (ortholog); podocyte cell migration (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); COVID-19 (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN actin cytoskeleton (ortholog); actomyosin contractile ring (ortholog); bleb (ortholog) NW_004955460 6972077 7033900 - 102003627 AGCD01048477;AGCD01048478;GBDF01156973;XM_005397763;XM_005397764;XM_005397767 XP_005397820;XP_005397821;XP_005397824 MODEL 39132138 rrna 5S_rRNA 5S ribosomal RNA 8893042 pseudo LOC102011715 pre-mRNA-splicing factor SLU7 pseudogene NW_004955402 54098472 54100151 + 102011715 AGCD01001386 MODEL 8933647 ncrna LOC102016243 uncharacterized LOC102016243 NW_004955460 2040343 2061691 - 102016243 AGCD01048386;XR_263025 MODEL 9038875 ncrna LOC102005710 uncharacterized LOC102005710 NW_004955418 22750893 22756659 + 102005710 AGCD01019292;XR_260582 MODEL 39131519 protein-coding CRB3 crumbs cell polarity complex component 3 8811334 protein-coding LOC102013994 olfactory receptor 2L3-like NW_004955619 182473 183411 - 102013994 AGCD01077343;XM_005415006 XP_005415063 MODEL 39133948 misc_rna 7SK 7SK RNA 8901744 protein-coding Jph2 junctophilin 2 ENCODES a protein that exhibits phosphatidic acid binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); regulation of cardiac muscle tissue development (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); dilated cardiomyopathy 2E (ortholog); FOUND IN junctional membrane complex (ortholog); membrane (ortholog); nucleus (ortholog) NW_004955445 13117312 13190061 + 102004866 AGCD01039767;AGCD01039768;AGCD01039769;AGCD01039770;GBCB01004208;GBCB01068302;XM_013518286 XP_013373740 MODEL 8896503 protein-coding Htr1d 5-hydroxytryptamine receptor 1D ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); serotonin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); intestine smooth muscle contraction (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Hypotension (ortholog); obsessive-compulsive disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); neuronal dense core vesicle (ortholog); plasma membrane (ortholog) NW_004955452 3207950 3228867 - 102012395 AGCD01043914;AGCD01043915;AGCD01043916;XM_005394751 XP_005394808 MODEL 8895896 ncrna LOC102020727 uncharacterized LOC102020727 NW_004955443 19528075 19529643 - 102020727 AGCD01038628;GBDF01014155;XR_262217 MODEL 8797314 protein-coding Epb41l2 erythrocyte membrane protein band 4.1 like 2 ENCODES a protein that exhibits PH domain binding (ortholog); spectrin binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); COP9 signalosome (ortholog) NW_004955436 11650584 11805822 - 102030344 AGCD01033818;AGCD01033819;AGCD01033820;GBBH01093601;XM_013516681 XP_013372135 MODEL 8728411 ncrna LOC102015488 uncharacterized LOC102015488 NW_004955464 912810 999951 - 102015488 AGCD01049942;AGCD01049943;GBCB01042127;XR_001236695;XR_001236696;XR_263184;XR_263185 MODEL 8983021 ncrna LOC102013631 uncharacterized LOC102013631 NW_004955427 18854952 18901498 - 102013631 AGCD01027352;AGCD01027353;AGCD01027354;GBDF01196054;XR_261278;XR_261279;XR_261280 MODEL 8753395 protein-coding LOC102007853 uncharacterized LOC102007853 NW_004955406 41658569 41676699 + 102007853 AGCD01006688;GBDK01152399;XM_005375483 XP_005375540 MODEL 8877859 pseudo LOC102008588 tetratricopeptide repeat protein 14 pseudogene NW_004955402 62282155 62283653 - 102008588 AGCD01001640 MODEL 39131367 protein-coding C10orf143 chromosome 10 open reading frame 143 8715372 protein-coding Aass aminoadipate-semialdehyde synthase ENCODES a protein that exhibits saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity (ortholog); saccharopine dehydrogenase (NADP+, L-lysine-forming) activity (ortholog); INVOLVED IN L-lysine catabolic process (ortholog); obsolete lysine catabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); hyperlysinemia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955479 3746003 3805835 - 102008622 AGCD01056301;AGCD01056302;AGCD01056303;GBDJ01423946;GBDK01279764;XM_013503294 XP_013358748 MODEL 8703664 protein-coding Ckm creatine kinase, M-type ENCODES a protein that exhibits creatine kinase activity (ortholog); INVOLVED IN phosphocreatine biosynthetic process (ortholog); PARTICIPATES IN creatine metabolic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Colonic Neoplasms (ortholog); ischemia (ortholog); FOUND IN extracellular space (ortholog) NW_004955555 2318072 2330733 - 102009326 AGCD01073144;AGCD01073145;GBDJ01231000;XM_005412510 XP_005412567 MODEL 8717808 pseudo LOC102008974 DNA primase small subunit pseudogene NW_004955434 12000624 12001975 + 102008974 AGCD01032382 MODEL 8892213 protein-coding LOC102014386 olfactory receptor 5D18-like NW_004955511 4982210 4983147 - 102014386 AGCD01066541;XM_013506413 XP_013361867 MODEL 8992801 pseudo LOC102021882 protein RUFY3 pseudogene NW_004955420 9999064 10000427 + 102021882 AGCD01020772 MODEL 39134211 misc_rna 7SK 7SK RNA 8995171 pseudo LOC102020361 hydroxysteroid dehydrogenase-like protein 2 NW_004955429 12779665 12781865 + 102020361 AGCD01028730 MODEL 8796536 protein-coding CUNH22orf46 chromosome unknown C22orf46 homolog NW_004955413 27176899 27184107 + 102023682 AGCD01014497;GBDF01003456;XM_005379366 XP_005379423 MODEL 39132140 rrna 5S_rRNA 5S ribosomal RNA 8710014 ncrna LOC102016612 uncharacterized LOC102016612 NW_004955423 5447517 5458475 - 102016612 AGCD01023560;GBCQ01074215;XR_260954 MODEL 8932056 ncrna LOC102019350 uncharacterized LOC102019350 NW_004955452 1066239 1067076 + 102019350 AGCD01043830;GBDF01124799;XR_262632 MODEL 8806480 protein-coding Eif4b eukaryotic translation initiation factor 4B PARTICIPATES IN mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); major depressive disorder (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); postsynapse (ortholog) NW_004955458 296242 325451 + 102010230 AGCD01047118;AGCD01047119;GBDF01000268;XM_005397137;XM_005397139;XM_005397140 XP_005397194;XP_005397196;XP_005397197 MODEL 8912222 protein-coding Dbx2 developing brain homeobox 2 INVOLVED IN epidermal growth factor receptor signaling pathway (ortholog); G2/M transition of mitotic cell cycle (ortholog); gene expression (ortholog) NW_004955500 4212848 4238727 - 102022309 AGCD01063772;GBDF01281507;XM_013505652 XP_013361106 MODEL 8765304 protein-coding Ctdnep1 CTD nuclear envelope phosphatase 1 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN gamete generation (ortholog); mesoderm development (ortholog); nuclear envelope organization (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); Nem1-Spo7 phosphatase complex (ortholog) NW_004955467 9660088 9666878 + 102025671 AGCD01051520;AGCD01051521;GBBH01119701;GBCB01006512;XM_005399537 XP_005399594 MODEL 9051537 protein-coding Igfbp4 insulin like growth factor binding protein 4 ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); INVOLVED IN positive regulation of insulin-like growth factor receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); regulation of cell growth (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular space (ortholog) NW_004955451 15027184 15029830 + 102022350 AGCD01043593;GBBH01003732;GBDJ01017128;XM_013519360 XP_013374814 MODEL 8761037 protein-coding LOC102003900 CSC1-like protein 1 NW_004955520 110432 115131 + 102003900 AGCD01068006;GBBH01033679;GBCC01001992;XM_013507053 XP_013362507 MODEL 8833242 protein-coding Dsp desmoplakin ENCODES a protein that exhibits protein kinase C binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN adherens junction organization (ortholog); bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH amyloidosis (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955465 6356970 6391206 - 102021539 AGCD01050441;GBBH01088064;GBDI01068103;XM_013521834 XP_013377288 MODEL 8839737 protein-coding LOC102007856 uncharacterized protein C3orf26 homolog NW_004955407 20972503 20976017 - 102007856 AGCD01007347;XM_013505935 XP_013361389 MODEL 39131881 rrna 5S_rRNA 5S ribosomal RNA 8978403 protein-coding LOC102010497 chromosome unknown open reading frame, human C16orf54 ASSOCIATED WITH COVID-19 (ortholog); spondylocostal dysostosis 5 (ortholog) NW_004955493 7204452 7207168 + 102010497 AGCD01061164;GBCQ01165127;XM_005405245;XM_005405246;XR_264093 XP_005405302;XP_005405303 MODEL 8831453 ncrna LOC102014391 uncharacterized LOC102014391 NW_004955434 5451396 5453621 - 102014391 AGCD01032189;GBBH01040902;XR_261610 MODEL 8918547 protein-coding Ano1 anoctamin 1 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to peptide (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH Moyamoya Disease 7 (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog); glutamatergic synapse (ortholog) NW_004955422 16064526 16213614 - 102021678 AGCD01022891;AGCD01022892;GBDK01414131;XM_005384239;XM_005384240;XM_005384241;XM_005384242;XM_005384243;XM_005384244;XM_005384246;XM_005384247;XM_013514309;XM_013514310 XP_005384296;XP_005384297;XP_005384298;XP_005384299;XP_005384300;XP_005384301;XP_005384303;XP_005384304;XP_013369763;XP_013369764 MODEL 8726199 ncrna LOC102011238 uncharacterized LOC102011238 NW_004955435 16675032 16735309 - 102011238 AGCD01033336;AGCD01033337;GBDF01045771;XR_001234857;XR_001234858;XR_261711;XR_261713 MODEL 8856077 protein-coding LOC102008978 putative HLA class I histocompatibility antigen, alpha chain H NW_004955437 59805 63404 - 102008978 AGCD01034100;GBBH01004597;XM_013516921;XM_013516922;XM_013516923;XM_013516924;XR_001235068;XR_001235069 XP_013372375;XP_013372376;XP_013372377;XP_013372378 MODEL 8891143 pseudo LOC102008226 voltage-dependent anion-selective channel protein 1-like NW_004955419 25137127 25158946 + 102008226 AGCD01020373;AGCD01020374 MODEL 8811458 protein-coding Fdxacb1 ferredoxin-fold anticodon binding domain containing 1 NW_004955412 13601032 13605418 - 102021326 AGCD01012842;GBDF01188626;XM_005378088 XP_005378145 MODEL 8976014 pseudo LOC102005715 60S ribosomal protein L7 pseudogene NW_004955487 5975491 5976261 + 102005715 AGCD01059350 MODEL 8944889 protein-coding Impdh1 inosine monophosphate dehydrogenase 1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); GMP biosynthetic process (ortholog); lymphocyte proliferation (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Leber congenital amaurosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955479 9388241 9406717 - 102026109 AGCD01056463;AGCD01056464;GBCE01009782;XM_005402371 XP_005402428 MODEL 8739096 protein-coding Kcnt1 potassium sodium-activated channel subfamily T member 1 ENCODES a protein that exhibits chloride-activated potassium channel activity (ortholog); intracellular sodium-activated potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy 1 (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN plasma membrane (ortholog); postsynaptic density membrane (ortholog) NW_004955513 4712772 4765657 - 102019835 AGCD01066938;AGCD01066939;GBDK01177445;XM_005408541;XM_005408542;XM_005408543;XM_005408544;XM_013506735;XM_013506736;XM_013506737;XM_013506738;XM_013506739 XP_005408598;XP_005408599;XP_005408600;XP_005408601;XP_013362189;XP_013362190;XP_013362191;XP_013362192;XP_013362193 MODEL 39133949 misc_rna 7SK 7SK RNA 8705561 protein-coding Jph3 junctophilin 3 INVOLVED IN exploration behavior (ortholog); learning (ortholog); locomotion (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); genetic disease (ortholog); Huntington's disease-like 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); junctional membrane complex (ortholog) NW_004955541 1969197 2020868 + 102027457 AGCD01071398;GBBH01037412;XM_005411005 XP_005411062 MODEL 8957402 protein-coding LOC102017764 olfactory receptor 51E2 NW_004955414 20281445 20282910 - 102017764 AGCD01015367;XM_005380055 XP_005380112 MODEL 9001508 pseudo LOC102009753 ADP-ribosylation factor-like protein 15 pseudogene NW_004955436 1336836 1341038 - 102009753 AGCD01033575 MODEL 8927383 protein-coding Grin2a glutamate ionotropic receptor NMDA type subunit 2A ENCODES a protein that exhibits ATPase binding (ortholog); calcium channel activity (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN action potential (ortholog); auditory behavior (ortholog); calcium ion transmembrane import into cytosol (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite membrane (ortholog) NW_004955442 8171114 8565187 + 102013012 AGCD01037641;AGCD01037642;AGCD01037643;AGCD01037644;AGCD01037645;AGCD01037646;AGCD01037647;XM_005391203 XP_005391260 MODEL 8775389 protein-coding Htr1e 5-hydroxytryptamine receptor 1E ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); serotonin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955411 13955905 14026555 + 102023013 AGCD01011905;AGCD01011906;AGCD01011907;XM_005377713 XP_005377770 MODEL 9055917 protein-coding LOC102024572 60S ribosomal protein L39-like NW_004955485 6403559 6408184 + 102024572 AGCD01058619;GBCE01062521;GBDK01223219;XM_013504070 XP_013359524 MODEL 10192690 pseudo LOC102013279 Ig kappa chain V-IV region-like NW_004955470 81723 82368 + 102013279 AGCD01052599 MODEL 8804190 pseudo LOC102012875 uncharacterized LOC102012875 NW_004955497 3366221 3391937 + 102012875 AGCD01062536;AGCD01062537;AGCD01062538;AGCD01062539 MODEL 9059369 pseudo LOC102015874 ELAV-like protein 2 NW_004955510 6263150 6264904 - 102015874 AGCD01066304 MODEL 8962039 pseudo LOC102013635 ornithine aminotransferase, mitochondrial pseudogene NW_004955428 10060530 10066301 + 102013635 AGCD01027854 MODEL 8943419 ncrna LOC102021142 uncharacterized LOC102021142 NW_004955423 24566396 24574514 + 102021142 AGCD01024037;XR_260992 MODEL 9041720 protein-coding Esrra estrogen related receptor alpha ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955422 20768450 20775205 - 102011328 AGCD01023086;GBCB01005642;GBDF01188656;XM_005384600 XP_005384657 MODEL 9053299 protein-coding Aatf apoptosis antagonizing transcription factor ENCODES a protein that exhibits leucine zipper domain binding (ortholog); protein kinase binding (ortholog); tau protein binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); negative regulation of apoptotic process (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955451 929278 1033665 - 102027134 AGCD01042954;AGCD01042955;AGCD01042956;AGCD01042957;AGCD01042958;GBCQ01064782;XM_005393937;XM_005393938 XP_005393994;XP_005393995 MODEL 9003964 ncrna LOC102011719 uncharacterized LOC102011719 NW_004955799 1703 3502 + 102011719 AGCD01078370;GBDF01089331;XR_265186 MODEL 8962046 protein-coding Ckmt2 creatine kinase, mitochondrial 2 ENCODES a protein that exhibits cardiolipin binding (ortholog); INVOLVED IN heart development (ortholog); skeletal muscle tissue development (ortholog); FOUND IN mitochondrion (ortholog) NW_004955418 28909999 28929109 - 102013721 AGCD01019447;AGCD01019448;GBDI01007315;XM_005382313;XM_013513078 XP_005382370;XP_013368532 MODEL 8766946 pseudo LOC102012078 ETS translocation variant 5 pseudogene NW_004955412 6032104 6035073 + 102012078 AGCD01012664 MODEL 8969669 protein-coding LOC102020366 uncharacterized LOC102020366 NW_004955431 22145724 22192946 - 102020366 AGCD01030511;GBCE01160470;XM_013515756 XP_013371210 MODEL 8974694 protein-coding LOC102007857 gamma-crystallin A NW_004955457 6963680 6966414 + 102007857 AGCD01046861;XM_005396969 XP_005397026 MODEL 10240238 ncrna LOC106149984 uncharacterized LOC106149984 NW_004955459 8412437 8438840 - 106149984 AGCD01048142;GBDF01207201;XR_001236489 MODEL 39132143 rrna 5S_rRNA 5S ribosomal RNA 8798789 ncrna LOC102019352 uncharacterized LOC102019352 NW_004955405 18424487 18429122 - 102019352 AGCD01005017;GBDJ01223618;XR_259387 MODEL 39131540 protein-coding C11orf53 chromosome 11 open reading frame 53 8780089 ncrna LOC102014756 uncharacterized LOC102014756 NW_004955464 799109 802427 - 102014756 AGCD01049942;GBCB01089079;XR_001236669;XR_263182 MODEL 8841629 protein-coding Eif4e eukaryotic translation initiation factor 4E ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); eukaryotic initiation factor 4G binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to dexamethasone stimulus (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN CRM1 export pathway; mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); mantle cell lymphoma (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955405 9122960 9159095 - 102021080 AGCD01004758;GBDJ01180164;XM_005374292;XM_013517467 XP_005374349;XP_013372921 MODEL 8866145 protein-coding Esrrb estrogen related receptor beta ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cell population proliferation (ortholog); embryonic placenta development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 35 (ortholog); dilated cardiomyopathy (ortholog); FOUND IN condensed chromosome (ortholog); cytoplasm (ortholog); integrator complex (ortholog) NW_004955438 365375 534086 + 102029663 AGCD01034946;AGCD01034947;AGCD01034948;AGCD01034949;AGCD01034950;AGCD01034951;GBCQ01188054;XM_005390154;XM_013517291;XM_013517292 XP_005390211;XP_013372745;XP_013372746 MODEL 9036914 pseudo LOC102009355 transcription elongation factor B polypeptide 1 pseudogene NW_004955459 15151409 15153569 + 102009355 AGCD01048312 MODEL 8721763 protein-coding LOC102008589 protein FAM170A-like NW_004955644 8842 16020 + 102008589 AGCD01077727;GBDF01075273;XM_005415048;XM_005415049 XP_005415105;XP_005415106 MODEL 8908393 pseudo LOC102013280 olfactory receptor 502-like NW_004955414 23688282 23689224 - 102013280 AGCD01015516 MODEL 39134212 misc_rna 7SK 7SK RNA 9054296 protein-coding Crb3 crumbs cell polarity complex component 3 ENCODES a protein that exhibits protein domain specific binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN positive regulation of cell junction assembly (ortholog); protein localization to plasma membrane (ortholog); tight junction organization (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); cell junction (ortholog) NW_004955495 3148729 3152269 - 102011781 AGCD01061828;GBDF01306587;GBDI01170399;XM_013505306 XP_013360760 MODEL 8786462 protein-coding LOC102016246 cytochrome c oxidase assembly factor 7 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia with axonal neuropathy 3 (ortholog); basal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955464 6472158 6490618 + 102016246 AGCD01050028;AGCD01050029;GBDF01221395;XM_005398571 XP_005398628 MODEL 8719330 protein-coding LOC102013995 disintegrin and metalloproteinase domain-containing protein 21 NW_004955656 37920 44620 - 102013995 AGCD01077846;GBDF01082523;XM_005415059 XP_005415116 MODEL 8907554 protein-coding Ackr4 atypical chemokine receptor 4 ENCODES a protein that exhibits chemokine receptor activity (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog) NW_004955501 5922727 5928735 - 102005062 AGCD01064175;GBDK01433060;XM_005406828;XM_005406830;XM_005406832;XM_005406833 XP_005406885;XP_005406887;XP_005406889;XP_005406890 MODEL 39131443 protein-coding DEFB113 defensin beta 113 8742760 protein-coding Dkc1 dyskerin pseudouridine synthase 1 ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); pseudouridine synthase activity (ortholog); RNA binding (ortholog); INVOLVED IN box H/ACA sno(s)RNA metabolic process (ortholog); enzyme-directed rRNA pseudouridine synthesis (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH anemia (ortholog); aplastic anemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); Cajal body (ortholog) NW_004955594 846997 857255 - 102006409 AGCD01076444;AGCD01076445;GBCE01187676;GBDJ01233070;XM_013509993 XP_013365447 MODEL 8922332 ncrna LOC102021144 uncharacterized LOC102021144 NW_004955496 7675102 7705978 - 102021144 AGCD01062383;GBDF01078340;XR_001231393;XR_001231394;XR_001231395;XR_001231396;XR_264182 MODEL 8989333 protein-coding Fdxr ferredoxin reductase ENCODES a protein that exhibits ferredoxin-NADP+ reductase activity (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); Auditory Neuropathy (ortholog); fundus dystrophy (ortholog); FOUND IN mitochondrion (ortholog) NW_004955553 1746759 1755316 - 102015157 AGCD01072899;GBBH01012159;XM_005412257;XM_005412259 XP_005412314;XP_005412316 MODEL 8824837 protein-coding LOC102015491 tubulin beta-2A chain NW_004955465 10042089 10045394 + 102015491 AGCD01050500;GBDF01189379;XM_005398897 XP_005398954 MODEL 8905600 protein-coding Epb41l3 erythrocyte membrane protein band 4.1 like 3 INVOLVED IN axon development (ortholog); myelin maintenance (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); meningioma (ortholog); FOUND IN axolemma (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955402 5459586 5674745 + 102005981 AGCD01000136;AGCD01000137;GBDF01004195;XM_005372623;XM_005372625;XM_005372626;XM_005372627;XM_005372629;XM_005372630;XM_013516834;XM_013516878;XM_013516964;XM_013517037;XM_013517088;XM_013517123;XM_013517195;XM_013517228;XM_013517264;XM_013517295;XM_013517317;XM_013517351;XM_013517381;XM_013517413;XM_013517440 XP_005372680;XP_005372682;XP_005372683;XP_005372684;XP_005372686;XP_005372687;XP_013372288;XP_013372332;XP_013372418;XP_013372491;XP_013372542;XP_013372577;XP_013372649;XP_013372682;XP_013372718;XP_013372749;XP_013372771;XP_013372805;XP_013372835;XP_013372867;XP_013372894 MODEL 8940705 protein-coding LOC102009755 pre-mRNA-processing factor 6 NW_004955528 243869 278279 - 102009755 AGCD01069519;AGCD01069520;AGCD01069521;AGCD01069522;AGCD01069523;GBCQ01156965;XM_013507476;XM_013507477;XM_013507478;XM_013507479;XM_013507480;XM_013507481 XP_013362930;XP_013362931;XP_013362932;XP_013362933;XP_013362934;XP_013362935 MODEL 8949239 pseudo LOC102003901 epidermal growth factor receptor substrate 15 pseudogene NW_004955433 95292 97670 + 102003901 AGCD01031301 MODEL 8739202 ncrna LOC102024573 uncharacterized LOC102024573 NW_004955486 1484368 1502960 + 102024573 AGCD01058956;GBBH01036206;XR_263940 MODEL 9006315 pseudo LOC102012878 mitochondrial import inner membrane translocase subunit TIM14 pseudogene NW_004955426 25828943 25829298 - 102012878 AGCD01026728 MODEL 8924199 protein-coding LOC102021884 zinc finger and SCAN domain-containing protein 2-like NW_004955491 5000354 5007435 + 102021884 AGCD01060466;GBDK01264771;XM_005404781;XM_005404782;XM_005404783;XM_005404784;XM_005404785;XM_005404786;XM_013504603;XM_013504604 XP_005404838;XP_005404839;XP_005404840;XP_005404841;XP_005404842;XP_005404843;XP_013360057;XP_013360058 MODEL 39131882 rrna 5S_rRNA 5S ribosomal RNA 8753030 pseudo LOC102013636 S-phase kinase-associated protein 1 pseudogene NW_004955509 3838009 3838505 + 102013636 AGCD01066036 MODEL 8720621 ncrna LOC102020731 uncharacterized LOC102020731 NW_004955447 18643804 18688153 + 102020731 AGCD01041182;AGCD01041183;AGCD01041184;GBCE01132641;XR_001235746;XR_001235747;XR_001235748 MODEL 9040989 protein-coding CUNH2orf42 chromosome unknown C2orf42 homolog FOUND IN nucleoplasm (ortholog) NW_004955424 14932677 14975332 + 102008871 AGCD01024665;AGCD01024666;AGCD01024667;AGCD01024668;AGCD01024669;AGCD01024670;AGCD01024671;GBDF01005965;XM_005385627;XM_005385628;XM_005385629;XM_005385630;XM_013514642;XM_013514644 XP_005385684;XP_005385685;XP_005385686;XP_005385687;XP_013370096;XP_013370098 MODEL 8761382 ncrna LOC102011240 uncharacterized LOC102011240 NW_004955435 21229107 21260847 + 102011240 AGCD01033474;GBDI01025489;XR_001234872;XR_261731;XR_261732 MODEL 9057105 protein-coding LOC102014392 vomeronasal type-2 receptor 116-like NW_004955524 3748454 3760647 - 102014392 AGCD01068925;AGCD01068926;XM_013507200 XP_013362654 MODEL 9024007 pseudo LOC102008985 60S ribosomal protein L32 pseudogene NW_004955437 1108077 1108584 + 102008985 AGCD01034190 MODEL 8756358 protein-coding Cks1b CDC28 protein kinase regulatory subunit 1B INVOLVED IN cell population proliferation (ortholog); mitotic cell cycle phase transition (ortholog); regulation of DNA-templated transcription (ortholog) NW_004955545 1479454 1483474 + 102016751 AGCD01071856;GBDF01085704;XM_005411535 XP_005411592 MODEL 8728420 protein-coding Dcaf1 DDB1 and CUL4 associated factor 1 ENCODES a protein that exhibits histone H2AT120 kinase activity (ortholog); nuclear estrogen receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cell competition in a multicellular organism (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN centrosome (ortholog); COP9 signalosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955532 3085386 3153952 - 102016515 AGCD01070267;AGCD01070268;AGCD01070269;GBCB01076935;XM_005410312;XM_005410314;XM_013507626;XM_013507627 XP_005410369;XP_005410371;XP_013363080;XP_013363081 MODEL 8887541 protein-coding Ctdp1 CTD phosphatase subunit 1 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); Tat protein binding (ortholog); TFIIF-class transcription factor complex binding (ortholog); INVOLVED IN exit from mitosis (ortholog); host-mediated activation of viral transcription (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Congenital Cataracts, Facial Dysmorphism, and Neuropathy (ortholog); FOUND IN centrosome (ortholog); midbody (ortholog); nucleoplasm (ortholog) NW_004955402 62817822 62914250 + 102025860 AGCD01001649;AGCD01001650;GBBH01006923;GBDF01053785;XM_005373116;XM_013511639 XP_005373173;XP_013367093 MODEL 8932229 ncrna LOC102005716 uncharacterized LOC102005716 NW_004955421 23197095 23198981 + 102005716 AGCD01022174;GBCB01036865;XR_260820 MODEL 8840858 protein-coding Jph4 junctophilin 4 INVOLVED IN learning (ortholog); neuromuscular process controlling balance (ortholog); regulation of cytokine production (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN dendritic shaft (ortholog); smooth endoplasmic reticulum (ortholog) NW_004955409 36785003 36795196 + 102016137 AGCD01010481;GBDI01053474;XM_005377060 XP_005377117 MODEL 9036761 protein-coding Impdh2 inosine monophosphate dehydrogenase 2 ENCODES a protein that exhibits identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); nucleotide binding (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); cellular response to interleukin-4 (ortholog); circadian rhythm (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; mycophenolic acid pharmacokinetics pathway; ASSOCIATED WITH Animal Disease Models (ortholog); dystonia (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955532 1047138 1051980 - 102006279 AGCD01070164;GBDI01080320;XM_005410178;XM_013507582 XP_005410235;XP_013363036 MODEL 8831526 pseudo LOC102017767 UAP56-interacting factor pseudogene NW_004955472 3663252 3663988 + 102017767 AGCD01053517 MODEL 9019199 protein-coding Dspp dentin sialophosphoprotein ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); biomineral tissue development (ortholog); ASSOCIATED WITH Autosomal Dominant Deafness 39 with Dentinogenesis Imperfecta 1 (ortholog); dental pulp calcification (ortholog); dentin dysplasia (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955474 2254842 2259303 - 102029177 AGCD01054286;AGCD01054287;XM_005401458 XP_005401515 MODEL 40834593 protein-coding C11orf80 chromosome 11 open reading frame 80 8999814 protein-coding Grin2b glutamate ionotropic receptor NMDA type subunit 2B ENCODES a protein that exhibits beta-catenin binding (ortholog); calcium channel activity (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN action potential (ortholog); associative learning (ortholog); auditory behavior (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; excitatory synaptic transmission pathway; long term potentiation; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); astigmatism (ortholog); FOUND IN apical dendrite (ortholog); cell surface (ortholog); ciliary tip (ortholog) NW_004955413 10358931 10780004 - 102023457 AGCD01013930;AGCD01013931;AGCD01013932;AGCD01013933;AGCD01013934;AGCD01013935;AGCD01013936;AGCD01013937;GBDF01262737;XM_005378984;XM_005378985 XP_005379041;XP_005379042 MODEL 8774168 protein-coding Htr1f 5-hydroxytryptamine receptor 1F ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); serotonin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); ASSOCIATED WITH migraine (ortholog); FOUND IN plasma membrane (ortholog) NW_004955407 5512124 5632458 - 102025434 AGCD01006921;AGCD01006922;AGCD01006923;AGCD01006924;GBCQ01013730;XM_013506130;XM_013506138;XM_013506141;XM_013506144 XP_013361584;XP_013361592;XP_013361595;XP_013361598 MODEL 8970787 protein-coding LOC102010503 lariat debranching enzyme-like NW_004955501 822211 823819 + 102010503 AGCD01064040;GBDF01305393;XM_005406749 XP_005406806 MODEL 8944731 protein-coding Eif4e1b eukaryotic translation initiation factor 4E family member 1B NW_004955408 28910141 28913692 + 102015926 AGCD01008734;GBDI01053386;XM_005376396;XM_013509642 XP_005376453;XP_013365096 MODEL 8773969 ncrna LOC102011721 uncharacterized LOC102011721 NW_004955403 45969900 45972939 - 102011721 AGCD01002845;XR_259243 MODEL 39134213 misc_rna 7SK 7SK RNA 9041799 protein-coding LOC102012087 interferon-induced very large GTPase 1-like NW_004955414 22472329 22477687 - 102012087 AGCD01015457;XM_005380508 XP_005380565 MODEL 8825637 protein-coding LOC102008228 chemokine XC receptor 1-like NW_004955420 26003029 26017172 + 102008228 AGCD01021384;AGCD01021385;AGCD01021386;AGCD01021387;AGCD01021388;GBDK01289511;XM_013513345 XP_013368799 MODEL 8933501 pseudo LOC102007860 60S ribosomal protein L5-like NW_004955408 33188427 33213642 + 102007860 AGCD01008863 MODEL 8719493 pseudo LOC102019354 ankyrin repeat family A protein 2 pseudogene NW_004955452 7466022 7466911 - 102019354 AGCD01044161 MODEL 39132146 rrna 5S_rRNA 5S ribosomal RNA 39133950 misc_rna 7SK 7SK RNA 9037143 protein-coding Kcnt2 potassium sodium-activated channel subfamily T member 2 ENCODES a protein that exhibits chloride-activated potassium channel activity (ortholog); intracellular sodium-activated potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN potassium ion export across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH Congenital Hyperinsulinism (ortholog); developmental and epileptic encephalopathy 57 (ortholog); epilepsy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 33080570 33441342 - 102022160 AGCD01006462;AGCD01006463;AGCD01006464;AGCD01006465;AGCD01006466;AGCD01006467;AGCD01006468;AGCD01006469;AGCD01006470;AGCD01006471;AGCD01006472;AGCD01006473;AGCD01006474;GBCE01012269;XM_005375110;XM_005375111 XP_005375167;XP_005375168 MODEL 8777601 pseudo LOC102008986 transcription elongation factor A N-terminal and central domain-containing protein-like NW_004955438 5285314 5286378 - 102008986 AGCD01035064 MODEL 8860728 protein-coding LOC102008590 protocadherin gamma-B7-like NW_004957438 6 1466 - 102008590 AGCD01080834;GBCB01007960;XM_005415231 XP_005415288 MODEL 8706690 pseudo LOC102016615 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955500 6543405 6544562 + 102016615 AGCD01063884;XR_264233 MODEL 8909051 protein-coding Ano10 anoctamin 10 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive cerebellar ataxia (ortholog); autosomal recessive spinocerebellar ataxia 10 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 27572561 27682099 + 102014252 AGCD01021456;AGCD01021457;GBDF01079973;XM_005383486 XP_005383543 MODEL 8982399 protein-coding Ctdsp1 CTD small phosphatase 1 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of neurogenesis (ortholog); negative regulation of neuron differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955453 14971276 14976667 - 102010544 AGCD01044879;GBDF01278846;XM_005395647;XM_005395648;XM_005395649 XP_005395704;XP_005395705;XP_005395706 MODEL 8740345 protein-coding Esrrg estrogen related receptor gamma ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); estrogen response element binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Fetal Growth Retardation (ortholog); primary ovarian insufficiency (ortholog) NW_004955406 1260240 1784652 + 102009797 AGCD01005630;AGCD01005631;AGCD01005632;AGCD01005633;AGCD01005634;AGCD01005635;AGCD01005636;GBCB01100801;XM_005374714;XM_013519877;XM_013519883;XM_013519891;XM_013519896;XM_013519901;XM_013519909;XM_013519919;XM_013519926 XP_005374771;XP_013375331;XP_013375337;XP_013375345;XP_013375350;XP_013375355;XP_013375363;XP_013375373;XP_013375380 MODEL 39131578 protein-coding C11orf96 chromosome 11 open reading frame 96 8853598 ncrna LOC102013996 uncharacterized LOC102013996 NW_004955403 28302700 28402563 - 102013996 AGCD01002336;GBCQ01089640;XR_001233584;XR_259210 MODEL 9003980 protein-coding Epb41l4a erythrocyte membrane protein band 4.1 like 4A ASSOCIATED WITH Failure to Thrive (ortholog); Hereditary Neoplastic Syndromes (ortholog) NW_004955418 2876345 3097365 + 102013606 AGCD01018777;AGCD01018778;AGCD01018779;GBCQ01099747;GBDF01195481;XM_005382155;XM_005382156;XM_005382157;XM_013513019 XP_005382212;XP_005382213;XP_005382214;XP_013368473 MODEL 8911068 protein-coding Crbn cereblon ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN locomotory exploration behavior (ortholog); negative regulation of large conductance calcium-activated potassium channel activity (ortholog); negative regulation of monoatomic ion transmembrane transport (ortholog); ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); autosomal recessive intellectual developmental disorder (ortholog); autosomal recessive intellectual developmental disorder 2 (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955421 10166927 10190470 + 102003976 AGCD01021867;AGCD01021868;AGCD01021869;AGCD01021870;GBCB01024270;GBDF01049191;XM_013513747 XP_013369201 MODEL 10118807 ncrna LOC106149985 uncharacterized LOC106149985 NW_004955406 17722370 17778855 - 106149985 AGCD01006015;GBDK01363875;XR_001236490 MODEL 9038563 protein-coding LOC102020372 uncharacterized LOC102020372 NW_004955527 2368171 2373713 + 102020372 AGCD01069433;GBDF01182599;XM_005409896 XP_005409953 MODEL 9042378 protein-coding Defb115 defensin beta 115 NW_004955422 29676981 29681067 + 102007030 AGCD01023407;XM_005384994 XP_005385051 MODEL 8960203 protein-coding Igfbp5 insulin like growth factor binding protein 5 ENCODES a protein that exhibits fibronectin binding (ortholog); insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cAMP (ortholog); female pregnancy (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); congenital diaphragmatic hernia (ortholog); Coronary Disease (ortholog); FOUND IN insulin-like growth factor ternary complex (ortholog) NW_004955453 16530110 16550733 + 102021941 AGCD01044905;GBCE01051975;XM_005395681 XP_005395738 MODEL 8769838 protein-coding Ackr5 atypical chemokine receptor 5 ENCODES a protein that exhibits adrenomedullin receptor activity (ortholog); C-C chemokine binding (ortholog); C-X-C chemokine binding (ortholog); INVOLVED IN response to hypoxia (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); pulmonary hypertension (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) NW_004955458 4749966 4754314 + 102018161 AGCD01047438;GBBH01222017;XM_005397336 XP_005397393 MODEL 39131536 protein-coding DKK1 dickkopf WNT signaling pathway inhibitor 1 8815861 ncrna LOC102014393 uncharacterized LOC102014393 NW_004955437 2443630 2449694 + 102014393 AGCD01034267;GBDF01039208;XR_001235000;XR_261834 MODEL 8925601 protein-coding Eif4e2 eukaryotic translation initiation factor 4E family member 2 ENCODES a protein that exhibits mRNA cap binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); negative regulation of translation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); P-body (ortholog) NW_004955453 3395483 3424649 - 102013901 AGCD01044658;GBCQ01098153;XM_005395367;XM_005395369;XM_013519962;XM_013519963 XP_005395424;XP_005395426;XP_013375416;XP_013375417 MODEL 8712092 ncrna LOC102015875 uncharacterized LOC102015875 NW_004955429 21522975 21526531 + 102015875 AGCD01029005;GBDF01223359;XR_261378 MODEL 8730970 pseudo LOC102014757 R3H domain-containing protein 1-like NW_004955464 6226741 6230179 + 102014757 AGCD01050019 MODEL 8757510 pseudo LOC102015492 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 pseudogene NW_004955412 25888206 25888471 - 102015492 AGCD01013177 MODEL 8724839 protein-coding Cks2 CDC28 protein kinase regulatory subunit 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cell population proliferation (ortholog); meiosis I (ortholog); mitotic cell cycle phase transition (ortholog); ASSOCIATED WITH COVID-19 (ortholog); polycystic ovary syndrome (ortholog) NW_004955515 2731210 2736296 - 102017372 AGCD01067260;GBDF01007976;XM_005408880 XP_005408937 MODEL 8732258 pseudo LOC102013281 40S ribosomal protein SA pseudogene NW_004955472 1342714 1343590 + 102013281 AGCD01053388 MODEL 8762834 ncrna LOC102009756 uncharacterized LOC102009756 NW_004955437 596440 600236 + 102009756 AGCD01034150;AGCD01034151;GBDF01305486;XR_261820 MODEL 39131325 protein-coding IMPG1 interphotoreceptor matrix proteoglycan 1 8876553 ncrna LOC102012879 uncharacterized LOC102012879 NW_004955504 2373902 2394467 + 102012879 AGCD01064857;AGCD01064858;GBCB01109961;XR_001231540;XR_264288 MODEL 9017287 protein-coding LOC102021885 zinc finger protein 709-like NW_004955494 8355432 8383974 + 102021885 AGCD01061583;AGCD01061584;GBDF01086917;XM_013505020 XP_013360474 MODEL 8722193 protein-coding Dst dystonin ENCODES a protein that exhibits integrin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell motility (ortholog); cytoplasmic microtubule organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cardiomyopathy (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cell leading edge (ortholog) NW_004955502 3175918 3610823 + 102027880 AGCD01064312;AGCD01064313;AGCD01064314;AGCD01064315;AGCD01064316;AGCD01064317;GBDF01287480;XM_005406890;XM_005406892;XM_005406893;XM_013505819;XM_013505820;XM_013505821;XM_013505822;XM_013505823 XP_005406947;XP_005406949;XP_005406950;XP_013361273;XP_013361274;XP_013361275;XP_013361276;XP_013361277 MODEL 8760552 protein-coding Htr2a 5-hydroxytryptamine receptor 2A ENCODES a protein that exhibits 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding (ortholog); G protein-coupled serotonin receptor activity (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); behavioral response to cocaine (ortholog); detection of mechanical stimulus involved in sensory perception of pain (ortholog); ASSOCIATED WITH acute stress disorder (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cell body fiber (ortholog); dendrite (ortholog); dendritic shaft (ortholog) NW_004955431 583165 646991 - 102012228 AGCD01029873;GBDK01201101;XM_005387547 XP_005387604 MODEL 8945910 protein-coding LOC102021146 zinc finger protein 709-like NW_004955499 106996 108903 - 102021146 AGCD01063185;XM_013505558 XP_013361012 MODEL 39134214 misc_rna 7SK 7SK RNA 8923359 protein-coding Ano2 anoctamin 2 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN chloride transport (ortholog); FOUND IN glutamatergic synapse (ortholog); non-motile cilium (ortholog); plasma membrane (ortholog) NW_004955413 3333275 3650255 - 102010569 AGCD01013569;AGCD01013570;AGCD01013571;AGCD01013572;AGCD01013573;AGCD01013574;AGCD01013575;AGCD01013576;AGCD01013577;AGCD01013578;GBDF01207637;XM_013511280 XP_013366734 MODEL 8872531 protein-coding CUNH2orf49 chromosome unknown C2orf49 homolog ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); tRNA-splicing ligase complex (ortholog) NW_004955470 10223467 10234309 + 102026964 AGCD01052859;GBDF01118856;XM_005400782 XP_005400839 MODEL 9039610 protein-coding LOC102011242 triggering receptor expressed on myeloid cells 1 NW_004955437 7849199 7863437 - 102011242 AGCD01034469;AGCD01034470;GBDJ01061958;XM_005389685;XM_013517118 XP_005389742;XP_013372572 MODEL 8890509 pseudo LOC102012089 serine racemase pseudogene NW_004955475 6283187 6284059 - 102012089 AGCD01054958 MODEL 8799074 ncrna LOC102009360 uncharacterized LOC102009360 NW_004955410 29294602 29317106 + 102009360 AGCD01011281;AGCD01011282;GBCQ01057489;XR_001232714 MODEL 8926149 protein-coding LOC102008229 vomeronasal type-1 receptor 48-like NW_004955421 21911814 21912737 + 102008229 AGCD01022124;XM_005383932 XP_005383989 MODEL 8841914 protein-coding Dcaf10 DDB1 and CUL4 associated factor 10 FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955419 28617171 28671475 - 102029970 AGCD01020470;AGCD01020471;AGCD01020472;AGCD01020473;GBBH01155192;GBCB01089630;XM_005382862 XP_005382919 MODEL 9032962 protein-coding LOC102007872 olfactory receptor 2B6-like NW_004955465 13408100 13409973 - 102007872 AGCD01050608;XM_005398953 XP_005399010 MODEL 9008631 pseudo LOC102005717 hippocampus abundant transcript 1 protein pseudogene NW_004955490 4529263 4530710 - 102005717 AGCD01060188 MODEL 9031861 ncrna LOC102017768 uncharacterized LOC102017768 NW_004955474 2920107 2934356 - 102017768 AGCD01054312;AGCD01054313;AGCD01054314;GBDF01015351;XR_001230742;XR_263592 MODEL 8794679 protein-coding Aatk apoptosis associated tyrosine kinase ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); brain development (ortholog); neuron apoptotic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955506 1828326 1868302 + 102012563 AGCD01065275;AGCD01065276;AGCD01065277;GBBH01130375;XM_005407305;XM_005407307;XM_005407308;XM_005407310;XM_005407311;XM_013506068;XM_013506069;XM_013506070;XM_013506071 XP_005407362;XP_005407364;XP_005407365;XP_005407367;XP_005407368;XP_013361522;XP_013361523;XP_013361524;XP_013361525 MODEL 8972541 ncrna LOC102016249 uncharacterized LOC102016249 NW_004955412 22847602 22851538 - 102016249 AGCD01013058;GBDJ01295391;XR_260010 MODEL 8796836 pseudo LOC102012095 heterogeneous nuclear ribonucleoprotein M pseudogene NW_004955417 9967960 9969097 + 102012095 AGCD01018063 MODEL 9024314 pseudo LOC102020733 upstream-binding factor 1-like protein 1 NW_004955448 7802383 7803407 - 102020733 AGCD01041425 MODEL 9023519 protein-coding LOC102010505 olfactory receptor 5A1 NW_004955511 3947526 3953543 + 102010505 AGCD01066484;XM_005408061 XP_005408118 MODEL 9065013 protein-coding Grin2c glutamate ionotropic receptor NMDA type subunit 2C ENCODES a protein that exhibits glutamate binding (ortholog); glutamate-gated receptor activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); directional locomotion (ortholog); excitatory postsynaptic potential (ortholog); FOUND IN glutamatergic synapse (ortholog); NMDA selective glutamate receptor complex (ortholog); plasma membrane (ortholog) NW_004955553 1729431 1746754 - 102004754 AGCD01072897;AGCD01072898;AGCD01072899;GBDJ01408115;XM_013508612 XP_013364066 MODEL 39131883 rrna 5S_rRNA 5S ribosomal RNA 8716128 ncrna LOC102008990 uncharacterized LOC102008990 NW_004955549 117973 173721 + 102008990 AGCD01072419;GBDF01076042;XR_001232252;XR_264912 MODEL 8881152 protein-coding LOC102008593 cholesterol 7-alpha-monooxygenase ENCODES a protein that exhibits cholesterol 7-alpha-monooxygenase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); cellular response to cholesterol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); autism spectrum disorder (ortholog); cholestasis (ortholog) NW_004955454 17035105 17078854 - 102008593 AGCD01045541;AGCD01045542;AGCD01045543;AGCD01045544;GBBH01001699;GBCQ01008759;XM_013520108 XP_013375562 MODEL 39131365 protein-coding C13orf42 chromosome 13 open reading frame 42 8900059 protein-coding Ctdsp2 CTD small phosphatase 2 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein phosphorylation (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway NW_004955458 5523548 5549190 - 102013389 AGCD01047497;AGCD01047498;AGCD01047499;GBCB01020492;XM_005397421 XP_005397478 MODEL 8813518 protein-coding Ess2 ess-2 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); nervous system development (ortholog); ASSOCIATED WITH DiGeorge syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog) NW_004955442 18829037 18840542 + 102012369 AGCD01038021;AGCD01038022;GBDF01125719;XM_005391788 XP_005391845 MODEL 8935149 protein-coding Fech ferrochelatase ENCODES a protein that exhibits ferrochelatase activity (ortholog); heme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cholesterol metabolic process (ortholog); detection of UV (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH bile duct disease (ortholog); colon adenocarcinoma (ortholog); cutaneous porphyria (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) NW_004955402 41902868 41938099 - 102005866 AGCD01001027;AGCD01001028;GBDI01250468;XM_005372975 XP_005373032 MODEL 8786895 protein-coding Crcp CGRP receptor component ENCODES a protein that exhibits calcitonin gene-related peptide receptor activity (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN neuropeptide signaling pathway (ortholog); termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Hyperalgesia (ortholog); sciatic neuropathy (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); dendrite (ortholog) NW_004955456 8431161 8479866 + 102005564 AGCD01046479;AGCD01046480;AGCD01046481;AGCD01046482;AGCD01046483;GBCE01097352;XM_005396709;XM_013520644;XM_013520645;XM_013520646 XP_005396766;XP_013376098;XP_013376099;XP_013376100 MODEL 39133951 misc_rna 7SK 7SK RNA 39132150 rrna 5S_rRNA 5S ribosomal RNA 9028418 protein-coding Jpt1 Jupiter microtubule associated homolog 1 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955553 2016822 2034576 - 102022023 AGCD01072911;GBBH01139670;XM_005412279;XM_005412280 XP_005412336;XP_005412337 MODEL 8984852 protein-coding Dkk1 dickkopf WNT signaling pathway inhibitor 1 ENCODES a protein that exhibits co-receptor binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); receptor antagonist activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); endoderm development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH anodontia (ortholog); Bone Fractures (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) NW_004955425 7353964 7357599 + 102017585 AGCD01025383;AGCD01025384;GBDK01196696;XM_013514768 XP_013370222 MODEL 8985855 protein-coding LOC102024577 olfactory receptor 13-like NW_004955491 398929 399861 + 102024577 AGCD01060332;XM_005404881 XP_005404938 MODEL 9064728 protein-coding CUNH2orf66 chromosome unknown C2orf66 homolog NW_004955403 3600567 3604378 + 102017411 AGCD01001770;GBDI01226309;XM_005373272;XM_013512112 XP_005373329;XP_013367566 MODEL 9053809 protein-coding Kcnv1 potassium voltage-gated channel modifier subfamily V member 1 ENCODES a protein that exhibits potassium channel activity (ortholog); FOUND IN plasma membrane (ortholog) NW_004955417 17292459 17298773 - 102026005 AGCD01018289;GBCQ01113591;XM_005381887 XP_005381944 MODEL 8945015 protein-coding LOC102003903 ADP-ribosylation factor-like protein 4A NW_004955436 16294434 16295575 - 102003903 AGCD01033912;GBDF01008117;XM_005389238 XP_005389295 MODEL 8843898 protein-coding LOC102013638 chromosome unknown open reading frame, human C10orf113 NW_004955429 7379866 7403057 + 102013638 AGCD01028592;AGCD01028593;GBDK01367199;XM_005387236 XP_005387293 MODEL 8914228 protein-coding LOC102015496 neuferricin ENCODES a protein that exhibits heme binding (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); FOUND IN extracellular region (ortholog) NW_004955467 12738072 12760212 - 102015496 AGCD01051658;GBDF01148203;XM_005399697;XM_005399698;XM_013522067;XM_013522069 XP_005399754;XP_005399755;XP_013377521;XP_013377523 MODEL 9018087 protein-coding Impg1 interphotoreceptor matrix proteoglycan 1 INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); macular degeneration (ortholog); retinitis pigmentosa (ortholog); FOUND IN gel phase of interstitial matrix (ortholog); interphotoreceptor matrix (ortholog) NW_004955502 4359071 4502623 - 102013312 AGCD01064334;AGCD01064335;AGCD01064336;AGCD01064337;GBDF01259084;XM_013505815 XP_013361269 MODEL 8972409 protein-coding Clasp1 cytoplasmic linker associated protein 1 ENCODES a protein that exhibits dystroglycan binding (ortholog); kinetochore binding (ortholog); microtubule binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); basement membrane organization (ortholog); cell division (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); Cough (ortholog); FOUND IN basal cortex (ortholog); cell cortex (ortholog); centrosomal corona (ortholog) NW_004955459 8382671 8628048 + 102013479 AGCD01048142;AGCD01048143;GBDI01181231;XM_005397639;XM_005397640;XM_005397643;XM_005397644;XM_005397645;XM_005397646;XM_013521069;XM_013521070;XM_013521071;XM_013521072;XM_013521073;XM_013521074;XM_013521075;XM_013521076 XP_005397696;XP_005397697;XP_005397700;XP_005397701;XP_005397702;XP_005397703;XP_013376523;XP_013376524;XP_013376525;XP_013376526;XP_013376527;XP_013376528;XP_013376529;XP_013376530 MODEL 8719988 pseudo LOC102013999 protein mago nashi homolog 2 pseudogene NW_004955403 41539551 41539998 + 102013999 AGCD01002723 MODEL 8753085 pseudo LOC102017770 IST1 homolog NW_004955416 24322305 24340636 - 102017770 AGCD01017567 MODEL 8896656 ncrna LOC102019357 uncharacterized LOC102019357 NW_004955454 7197852 7234878 - 102019357 AGCD01045286;AGCD01045287;AGCD01045288;AGCD01045289;AGCD01045290;GBDF01123367;XR_001236239;XR_001236240;XR_001236241;XR_262780 MODEL 8935973 protein-coding LOC102020373 interleukin-1 receptor accessory protein-like 1 NW_004955531 1088287 1356479 - 102020373 AGCD01070020;AGCD01070021;AGCD01070022;AGCD01070023;AGCD01070024;AGCD01070025;AGCD01070026;AGCD01070027;AGCD01070028;AGCD01070029;XM_013507557 XP_013363011 MODEL 8737255 protein-coding Igfbp6 insulin like growth factor binding protein 6 ENCODES a protein that exhibits identical protein binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of stress-activated MAPK cascade (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); contact dermatitis (ortholog); endometriosis (ortholog); FOUND IN extracellular space (ortholog); insulin-like growth factor binary complex (ortholog) NW_004955458 377929 382109 + 102011740 AGCD01047122;GBDJ01023220;XM_005397143 XP_005397200 MODEL 8731364 protein-coding Acly ATP citrate lyase ENCODES a protein that exhibits ATP citrate synthase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA metabolic process (ortholog); acyl-CoA biosynthetic process (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; ASSOCIATED WITH congestive heart failure (ortholog); hepatocellular carcinoma (ortholog); obesity (ortholog); FOUND IN cytosol (ortholog) NW_004955451 16058916 16091831 - 102008173 AGCD01043651;AGCD01043652;GBCE01052163;XM_005394422;XM_005394423 XP_005394479;XP_005394480 MODEL 8999023 protein-coding Htr2b 5-hydroxytryptamine receptor 2B ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cardiac muscle hypertrophy (ortholog); cellular response to amine stimulus (ortholog); ASSOCIATED WITH brain infarction (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); G protein-coupled serotonin receptor complex (ortholog) NW_004955453 4352278 4367807 + 102023428 AGCD01044686;GBDJ01237410;XM_005395400;XM_005395401;XM_005395402;XM_013519961 XP_005395457;XP_005395458;XP_005395459;XP_013375415 MODEL 9036877 pseudo LOC102008236 tubulin alpha-1C chain-like NW_004955495 3000619 3002493 - 102008236 AGCD01061814 MODEL 8784296 ncrna LOC102011725 uncharacterized LOC102011725 NW_004955404 11149721 11163056 - 102011725 AGCD01003414;AGCD01003415;GBDF01148811;XR_259301 MODEL 8925580 ncrna LOC102013282 uncharacterized LOC102013282 NW_004955415 3826712 3849145 + 102013282 AGCD01015954;AGCD01015955;AGCD01015956;XR_001233214;XR_260262 MODEL 8888214 ncrna LOC102016250 uncharacterized LOC102016250 NW_004955466 8824099 8836048 + 102016250 AGCD01051001;GBDF01015997;XR_263298 MODEL 8776326 protein-coding Dcaf11 DDB1 and CUL4 associated factor 11 INVOLVED IN cognition (ortholog); exploration behavior (ortholog); gene expression (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) NW_004955409 36272184 36279985 - 102012168 AGCD01010454;GBBH01034603;XM_005377047;XM_005377048;XM_005377049;XM_013510410 XP_005377104;XP_005377105;XP_005377106;XP_013365864 MODEL 8733562 protein-coding LOC102009757 ubiquinol-cytochrome-c reductase complex assembly factor 2 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); positive regulation of mitochondrial translation (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 7 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) NW_004955437 2107475 2119892 - 102009757 AGCD01034260;GBDF01065831;XM_005389507 XP_005389564 MODEL 8793024 protein-coding Defb116 defensin beta 116 NW_004955422 29569787 29613939 + 102006679 AGCD01023402;AGCD01023403;XM_005384993 XP_005385050 MODEL 9014845 pseudo LOC102020737 transmembrane protein 59-like NW_004955450 7714611 7725226 + 102020737 AGCD01042545;AGCD01042546 MODEL 8807962 protein-coding LOC102005721 RNA-binding protein 14 NW_004955422 18730230 18755479 - 102005721 AGCD01022960;GBBH01033313;XM_005384379;XM_005384380;XM_005384381;XM_005384383;XM_005384385;XM_013513904;XM_013513905;XM_013513906 XP_005384436;XP_005384437;XP_005384438;XP_005384440;XP_005384442;XP_013369358;XP_013369359;XP_013369360 MODEL 8711176 pseudo LOC102012100 target of rapamycin complex 2 subunit MAPKAP1-like NW_004955421 30163102 30165459 + 102012100 AGCD01022382 MODEL 8979178 protein-coding Dstn destrin, actin depolymerizing factor ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament fragmentation (ortholog); cell motility (ortholog); ASSOCIATED WITH Acute Otitis Media; Animal Disease Models (ortholog); congestive heart failure (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955415 26567457 26598978 + 102009832 AGCD01016599;AGCD01016600;GBCB01022551;XM_005380907 XP_005380964 MODEL 8890002 protein-coding LOC102021149 WAS/WASL-interacting protein family member 3-like NW_004955425 16695120 16696208 - 102021149 AGCD01025618;GBDF01178123;XM_013514909 XP_013370363 MODEL 9009520 pseudo LOC102008594 eukaryotic translation initiation factor 2A-like NW_004955406 5948906 5974852 + 102008594 AGCD01005744 MODEL 9027401 pseudo LOC102015884 heterogeneous nuclear ribonucleoprotein M-like NW_004955434 16085495 16089791 - 102015884 AGCD01032511 MODEL 8769646 pseudo LOC102011246 rRNA-processing protein FCF1 homolog pseudogene NW_004955438 12170534 12171127 - 102011246 AGCD01035254 MODEL 8714766 protein-coding LOC102014759 coiled-coil domain-containing protein 177 NW_004955466 820834 821991 + 102014759 AGCD01050678;XM_005399242 XP_005399299 MODEL 39134215 misc_rna 7SK 7SK RNA 8911504 pseudo LOC102019358 60S ribosomal protein L18a pseudogene NW_004955454 14060960 14061488 - 102019358 AGCD01045461 MODEL 8727328 protein-coding Eif4e3 eukaryotic translation initiation factor 4E family member 3 ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955421 16354282 16520422 + 102006921 AGCD01021999;AGCD01022000;AGCD01022001;AGCD01022002;AGCD01022003;AGCD01022004;GBBH01218978;GBCE01142138;XM_005383789;XM_013513679 XP_005383846;XP_013369133 MODEL 8987115 pseudo LOC102016617 ubiquitin-conjugating enzyme E2 D3 pseudogene NW_004955501 859695 860131 - 102016617 AGCD01064042 MODEL 9014295 protein-coding LOC102009370 protein FAM69A NW_004955469 9920282 9922602 + 102009370 AGCD01052521;GBCB01040907;GBDJ01083890;XM_005400517 XP_005400574 MODEL 8709424 protein-coding Crct1 cysteine rich C-terminal 1 NW_004955592 895325 896939 - 102016768 AGCD01076334;GBDI01182859;XM_005414629;XM_013509979 XP_005414686;XP_013365433 MODEL 8973886 protein-coding Dkk2 dickkopf WNT signaling pathway inhibitor 2 ENCODES a protein that exhibits co-receptor binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN extracellular space (ortholog); Golgi apparatus (ortholog) NW_004955496 2489373 2578310 + 102006790 AGCD01062269;AGCD01062270;GBBH01218890;XM_005406215 XP_005406272 MODEL 8813819 protein-coding LOC102021887 zinc finger protein 26-like NW_004955495 970228 1001874 - 102021887 AGCD01061663;GBCQ01059108;XM_013505065;XM_013505066;XM_013505067;XM_013505068;XM_013505069;XM_013505070 XP_013360519;XP_013360520;XP_013360521;XP_013360522;XP_013360523;XP_013360524 MODEL 10381707 ncrna LOC106149986 uncharacterized LOC106149986 NW_004955459 15441364 15449019 - 106149986 AGCD01048322;GBDF01248965;XR_001236491;XR_001236492 MODEL 8756689 ncrna LOC102003910 uncharacterized LOC102003910 NW_004955547 2449218 2452224 + 102003910 AGCD01072281;GBDF01261280;XR_001232226;XR_001232227;XR_264909 MODEL 8844557 protein-coding Epb41l4b erythrocyte membrane protein band 4.1 like 4B INVOLVED IN actomyosin structure organization (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of gene expression (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog) NW_004955419 17686096 17821884 + 102003658 AGCD01020161;AGCD01020162;AGCD01020163;AGCD01020164;GBCE01117906;GBCE01117907;XM_013513219;XM_013513220 XP_013368673;XP_013368674 MODEL 8721093 ncrna LOC102010512 uncharacterized LOC102010512 NW_004955432 10654891 10664188 - 102010512 AGCD01030936;GBCE01078510;XR_001234668;XR_261522 MODEL 8976850 ncrna LOC102008991 uncharacterized LOC102008991 NW_004955551 215613 228844 - 102008991 AGCD01072651;GBDF01122997;XR_001232270;XR_001232271;XR_001232272;XR_001232273 MODEL 39131884 rrna 5S_rRNA 5S ribosomal RNA 39131556 protein-coding DEFB116 defensin beta 116 8742374 protein-coding LOC102020374 atherin-like NW_004955437 223848 227296 + 102020374 AGCD01034111;GBDF01262028;XM_005389354;XM_005389355;XR_001235058 XP_005389411;XP_005389412 MODEL 8744291 protein-coding Ano3 anoctamin 3 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); detection of mechanical stimulus (ortholog); ASSOCIATED WITH dystonia (ortholog); dystonia 24 (ortholog); Febrile Seizures (ortholog); FOUND IN cilium (ortholog) NW_004955476 5702888 6060545 + 102013601 AGCD01055314;AGCD01055315;AGCD01055316;AGCD01055317;AGCD01055318;AGCD01055319;AGCD01055320;AGCD01055321;AGCD01055322;GBDK01351306;XM_005401742;XM_005401743 XP_005401799;XP_005401800 MODEL 8826406 protein-coding Fem1a fem-1 homolog A ENCODES a protein that exhibits EP4 subtype prostaglandin E2 receptor binding (ortholog); molecular adaptor activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); positive regulation of inflammatory response (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955495 4214250 4217313 - 102003564 AGCD01061903;GBBH01062827;XM_005405778 XP_005405835 MODEL 39132153 rrna 5S_rRNA 5S ribosomal RNA 9011113 protein-coding LOC102012883 putative olfactory receptor 5AK3 NW_004955511 2055889 2056836 + 102012883 AGCD01066387;XM_005407982 XP_005408039 MODEL 8881163 ncrna LOC102008595 uncharacterized LOC102008595 NW_004955455 5552047 5558107 + 102008595 AGCD01045738;GBDF01182597;XR_001236290;XR_001236291 MODEL 8812203 protein-coding Abat 4-aminobutyrate aminotransferase ENCODES a protein that exhibits (S)-3-amino-2-methylpropionate transaminase activity (ortholog); 4-aminobutyrate:2-oxoglutarate transaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cerebellum development (ortholog); copulation (ortholog); exploration behavior (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Alzheimer's disease (ortholog); Anorexia (ortholog); FOUND IN 4-aminobutyrate transaminase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955442 9422849 9516054 - 102018440 AGCD01037679;AGCD01037680;AGCD01037681;AGCD01037682;AGCD01037683;AGCD01037684;GBCQ01152006;XM_005391219;XM_005391220 XP_005391276;XP_005391277 MODEL 8812973 ncrna LOC102019360 uncharacterized LOC102019360 NW_004955455 1777137 1777874 + 102019360 AGCD01045584;GBDF01053108;XR_262814 MODEL 41410888 protein-coding C16orf87 chromosome 16 open reading frame 87 9051520 protein-coding Grin2d glutamate ionotropic receptor NMDA type subunit 2D ENCODES a protein that exhibits glutamate binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); glutamate-gated receptor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); calcium ion transmembrane import into cytosol (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 46 (ortholog); Developmental Disease (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); NMDA selective glutamate receptor complex (ortholog) NW_004955559 2042723 2080706 - 102022027 AGCD01073688;AGCD01073689;AGCD01073690;AGCD01073691;GBCB01120888;GBDF01281630;XM_013508950 XP_013364404 MODEL 8769007 ncrna LOC102015497 uncharacterized LOC102015497 NW_004955413 9351520 9367102 - 102015497 AGCD01013903;XR_260073 MODEL 8935803 pseudo LOC102014399 uncharacterized LOC102014399 NW_004955446 16225508 16290031 - 102014399 AGCD01040317;AGCD01040318;AGCD01040319;AGCD01040320 MODEL 9065175 pseudo LOC102016252 nucleosome assembly protein 1-like 1 NW_004955467 1693812 1695006 + 102016252 AGCD01051276 MODEL 8968131 protein-coding LOC102008239 prolyl-tRNA synthetase associated domain-containing protein 1 NW_004955424 27774507 27776459 - 102008239 AGCD01025126;GBCQ01153725;XM_005385777 XP_005385834 MODEL 9018127 pseudo LOC102014002 cyclin-G1-like NW_004955405 15776517 15779140 - 102014002 AGCD01004952 MODEL 9065482 protein-coding Abca1 ATP binding cassette subfamily A member 1 ENCODES a protein that exhibits apolipoprotein A-I binding (ortholog); apolipoprotein A-I receptor activity (ortholog); apolipoprotein binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cholesterol (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN altered reverse cholesterol transport pathway; retinol metabolic pathway; reverse cholesterol transport pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955419 21553863 21681626 + 102029865 AGCD01020281;GBBH01213940;XM_005382782;XM_005382783 XP_005382839;XP_005382840 MODEL 9064735 protein-coding LOC102017774 haptoglobin NW_004955484 4738412 4742596 + 102017774 AGCD01058231;GBDJ01008430;XM_005403528 XP_005403585 MODEL 8840680 protein-coding Ctdspl CTD small phosphatase like INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog) NW_004955421 4705664 4831463 + 102009724 AGCD01021700;AGCD01021701;AGCD01021702;GBBH01126080;GBDK01131136;XM_005383711 XP_005383768 MODEL 9050946 protein-coding Esx1 ESX homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN blood vessel development (ortholog); labyrinthine layer blood vessel development (ortholog); labyrinthine layer morphogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 57 (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955548 1087441 1095070 - 102004647 AGCD01072356;AGCD01072357;AGCD01072358;GBDF01189839;XM_005412009 XP_005412066 MODEL 8973552 pseudo LOC102024579 heterogeneous nuclear ribonucleoprotein H2-like NW_004955493 2976417 2978113 + 102024579 AGCD01060974 MODEL 8783134 protein-coding Jpt2 Jupiter microtubule associated homolog 2 INVOLVED IN endocytosis involved in viral entry into host cell (ortholog); regulation of calcium-mediated signaling (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955442 15549223 15563027 - 102025848 AGCD01037876;AGCD01037877;GBDK01197515;XM_005391540;XM_005391541 XP_005391597;XP_005391598 MODEL 8928438 protein-coding Igfbp7 insulin like growth factor binding protein 7 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); Burns (ortholog); FOUND IN extracellular space (ortholog) NW_004955447 14048834 14110264 + 102005194 AGCD01040979;GBCB01003373;GBDK01007633;XM_013518518 XP_013373972 MODEL 9055653 pseudo LOC102011252 coiled-coil domain-containing protein 94 pseudogene NW_004955549 1407026 1453477 + 102011252 AGCD01072448;AGCD01072449 MODEL 8822344 protein-coding Acmsd aminocarboxymuconate semialdehyde decarboxylase ENCODES a protein that exhibits aminocarboxymuconate-semialdehyde decarboxylase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); negative regulation of quinolinate biosynthetic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); kidney failure (ortholog); Puromycin Aminonucleoside Nephrosis (ortholog); FOUND IN cytosol (ortholog) NW_004955440 2348434 2412706 + 102003806 AGCD01036206;AGCD01036207;GBCQ01033145;XM_005390746;XM_005390748;XM_005390749;XM_013517510;XM_013517511 XP_005390803;XP_005390805;XP_005390806;XP_013372964;XP_013372965 MODEL 8765745 pseudo LOC102013640 S-formylglutathione hydrolase pseudogene NW_004955431 13529546 13530392 + 102013640 AGCD01030308 MODEL 9030148 ncrna LOC102020378 uncharacterized LOC102020378 NW_004955538 189557 202222 + 102020378 AGCD01070991;AGCD01070992;AGCD01070993;GBBH01198262;XR_001232102;XR_264784;XR_264785;XR_264786;XR_264787 MODEL 8870445 protein-coding LOC102014763 solute carrier organic anion transporter family member 1B1 NW_004955413 16733331 16794870 + 102014763 AGCD01014110;AGCD01014111;AGCD01014112;AGCD01014113;AGCD01014114;XM_005379050 XP_005379107 MODEL 8777159 protein-coding Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein phosphatase 2A binding (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to hypoxia (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); human immunodeficiency virus infectious disease (ortholog); Inflammation (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955463 13702434 13720875 + 102018576 AGCD01049885;GBBH01185303;XM_005398430 XP_005398487 MODEL 8871233 pseudo LOC102011727 GTP:AMP phosphotransferase AK3, mitochondrial-like NW_004955404 141224 156690 - 102011727 AGCD01003197 MODEL 8952705 ncrna LOC102009372 uncharacterized LOC102009372 NW_004955470 3387443 3399619 - 102009372 AGCD01052700;GBDF01014209;XR_263462 MODEL 9027756 pseudo LOC102013284 histone deacetylase 1 pseudogene NW_004955474 8472117 8474602 + 102013284 AGCD01054554 MODEL 8746093 protein-coding Dcaf12 DDB1 and CUL4 associated factor 12 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN regulation of autophagy (ortholog); T cell activation (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955472 1943477 1974938 + 102006238 AGCD01053424;AGCD01053425;GBCQ01123987;GBDF01044441;XM_005401095 XP_005401152 MODEL 9033490 protein-coding Impg2 interphotoreceptor matrix proteoglycan 2 ENCODES a protein that exhibits heparin binding (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); intracellular protein localization (ortholog); retina morphogenesis in camera-type eye (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); Eye Abnormalities (ortholog); fundus dystrophy (ortholog); FOUND IN gel phase of interstitial matrix (ortholog); interphotoreceptor matrix (ortholog); receptor complex (ortholog) NW_004955427 2825940 2919282 - 102027552 AGCD01026905;AGCD01026906;AGCD01026907;GBDI01097241;XM_013515197 XP_013370651 MODEL 8871504 protein-coding Clasp2 cytoplasmic linker associated protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); dystroglycan binding (ortholog); microtubule binding (ortholog); INVOLVED IN basement membrane organization (ortholog); cell migration (ortholog); cellular response to insulin stimulus (ortholog); FOUND IN axonal growth cone (ortholog); basal cortex (ortholog); cell cortex (ortholog) NW_004955421 767648 957160 - 102019605 AGCD01021578;AGCD01021579;AGCD01021580;AGCD01021581;AGCD01021582;AGCD01021583;GBCB01004782;XM_005383646;XM_005383650;XM_005383651;XM_005383653;XM_005383655;XM_013513733;XM_013513734;XM_013513736;XM_013513737;XM_013513738;XM_013513739;XM_013513740;XM_013513741;XM_013513742;XM_013513743;XM_013513744;XM_013513745;XM_013513746 XP_005383703;XP_005383707;XP_005383708;XP_005383710;XP_005383712;XP_013369187;XP_013369188;XP_013369190;XP_013369191;XP_013369192;XP_013369193;XP_013369194;XP_013369195;XP_013369196;XP_013369197;XP_013369198;XP_013369199;XP_013369200 MODEL 8742485 ncrna LOC102021888 uncharacterized LOC102021888 NW_004955423 16031061 16038434 + 102021888 AGCD01023823;GBDF01148255;XR_260972 MODEL 9059268 protein-coding Dkk3 dickkopf WNT signaling pathway inhibitor 3 INVOLVED IN adrenal gland development (ortholog); negative regulation of aldosterone biosynthetic process (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); polycystic liver disease (ortholog) NW_004955414 27466636 27507186 - 102011436 AGCD01015663;GBDK01021738;XM_005380293;XM_013512053 XP_005380350;XP_013367507 MODEL 39133952 misc_rna 7SK 7SK RNA 8863892 pseudo LOC102007875 AP-3 complex subunit sigma-1 pseudogene NW_004955412 13389131 13390789 - 102007875 AGCD01012835 MODEL 8737136 pseudo LOC102005723 putative olfactory receptor 9A1 NW_004955494 1730333 1731273 + 102005723 AGCD01061422 MODEL 8762871 pseudo LOC102012105 39S ribosomal protein L33, mitochondrial pseudogene NW_004955425 1338173 1339060 + 102012105 AGCD01025221;XM_005386083 MODEL 39131886 rrna 5S_rRNA 5S ribosomal RNA 9029023 protein-coding LOC102021151 cytochrome c oxidase copper chaperone ENCODES a protein that exhibits copper chaperone activity (ortholog); copper ion binding (ortholog); cuprous ion binding (ortholog); INVOLVED IN heart development (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH Chronic Hepatitis (ortholog); Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955427 19376482 19384270 - 102021151 AGCD01027366;GBDK01000954;XM_005386454 XP_005386511 MODEL 8767676 ncrna LOC102008245 uncharacterized LOC102008245 NW_004955429 19596397 19597902 - 102008245 AGCD01028966;GBCB01088322;XR_261365 MODEL 39134216 misc_rna 7SK 7SK RNA 8934547 protein-coding Dstyk dual serine/threonine and tyrosine protein kinase INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH CAKUT1 (ortholog); chronic kidney disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955406 40922972 40971433 - 102006095 AGCD01006667;GBDJ01279572;XM_005375347 XP_005375404 MODEL 9043445 protein-coding CUNH2orf68 chromosome unknown C2orf68 homolog NW_004955424 1895757 1897797 + 102026763 AGCD01024249;GBDF01155585;XM_005385419 XP_005385476 MODEL 8926496 protein-coding Defb118 defensin beta 118 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); membrane destabilizing activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog) NW_004955422 29554310 29560660 - 102024353 AGCD01023402;GBDF01056234;XM_005384922 XP_005384979 MODEL 8964948 protein-coding Kcnv2 potassium voltage-gated channel modifier subfamily V member 2 ASSOCIATED WITH cone dystrophy (ortholog); cone dystrophy with supernormal rod responses (ortholog); cone-rod dystrophy (ortholog) NW_004955434 7122287 7133737 + 102018854 AGCD01032227;XM_005388613 XP_005388670 MODEL 10121486 ncrna LOC106149987 uncharacterized LOC106149987 NW_004955459 11592159 11647074 + 106149987 AGCD01048233;GBDF01277077;XR_001236494 MODEL 9063061 pseudo LOC102013641 protein yippee-like 5 NW_004955431 4838789 4839154 + 102013641 AGCD01030014 MODEL 126903047 protein-coding C17orf114 chromosome 17 open reading frame 114 8774134 protein-coding LOC102020743 ubiquitin carboxyl-terminal hydrolase 17 NW_004955403 53540579 53541734 - 102020743 AGCD01003060;XM_013514944 XP_013370398 MODEL 8885594 ncrna LOC102010513 uncharacterized LOC102010513 NW_004955518 2093768 2169658 - 102010513 AGCD01067771;GBDI01245852;XR_001231842;XR_001231843;XR_001231844;XR_001231845;XR_001231846;XR_001231847;XR_001231848;XR_264567 MODEL 9053548 protein-coding LOC102015886 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like NW_004955435 22449820 22464762 + 102015886 AGCD01033503;GBCQ01004122;XM_005389080 XP_005389137 MODEL 9001480 protein-coding LOC102008992 collagen alpha-1(III) chain-like NW_004955442 14342214 14354918 - 102008992 AGCD01037812;AGCD01037813;GBDJ01377609;XM_013517858;XM_013517859;XM_013517860 XP_013373312;XP_013373313;XP_013373314 MODEL 8758011 protein-coding Clasrp CLK4 associating serine/arginine rich protein FOUND IN nucleoplasm (ortholog) NW_004955555 2086356 2109503 + 102003070 AGCD01073129;AGCD01073130;GBBH01119174;XM_005412485;XM_005412486;XM_005412488;XM_013508747 XP_005412542;XP_005412543;XP_005412545;XP_013364201 MODEL 8849525 protein-coding Htr2c 5-hydroxytryptamine receptor 2C ENCODES a protein that exhibits 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding (ortholog); G protein-coupled serotonin receptor activity (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); behavioral fear response (ortholog); behavioral response to nicotine (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); G protein-coupled serotonin receptor complex (ortholog) NW_004955490 912615 1126347 - 102027753 AGCD01060097;AGCD01060098;AGCD01060099;AGCD01060100;AGCD01060101;XM_005404627 XP_005404684 MODEL 8802208 ncrna LOC102016618 uncharacterized LOC102016618 NW_004955505 6516271 6516730 + 102016618 AGCD01065176;GBDF01277071;XR_264310 MODEL 39132154 rrna 5S_rRNA 5S ribosomal RNA 8758606 protein-coding LOC102024582 olfactory receptor-like protein OLF3 NW_004955494 69060 69994 - 102024582 AGCD01061352;GBDF01269797;XM_013504914 XP_013360368 MODEL 9030175 protein-coding Fem1b fem-1 homolog B ENCODES a protein that exhibits death receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN branching involved in prostate gland morphogenesis (ortholog); epithelial cell maturation (ortholog); epithelial cell maturation involved in prostate gland development (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 7834487 7847334 - 102021614 AGCD01042549;AGCD01042550;GBCB01087486;GBDJ01031831;XM_005393677 XP_005393734 MODEL 9019894 protein-coding Creb1 cAMP responsive element binding protein 1 ENCODES a protein that exhibits arrestin family protein binding (ortholog); cAMP response element binding (ortholog); DNA binding (ortholog); INVOLVED IN axonogenesis (ortholog); cAMP/PKA signal transduction (ortholog); cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; follicle-stimulating hormone signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amnestic disorder (ortholog); FOUND IN ATF4-CREB1 transcription factor complex (ortholog); axon (ortholog); chromatin (ortholog) NW_004955457 7424403 7490630 - 102012284 AGCD01046879;AGCD01046880;AGCD01046881;AGCD01046882;AGCD01046883;GBCE01044636;XM_005396981;XM_005396982;XM_013520690;XM_013520691;XM_013520692;XM_013520693;XR_001236401 XP_005397038;XP_005397039;XP_013376144;XP_013376145;XP_013376146;XP_013376147 MODEL 9015840 protein-coding LOC102019361 serine/threonine-protein kinase B-raf-like NW_004955407 3772121 3773907 - 102019361 AGCD01006864;GBDJ01076254;XM_005375516 XP_005375573 MODEL 8727472 protein-coding LOC102009764 keratin, type II cytoskeletal 75 NW_004955547 2773524 2784448 - 102009764 AGCD01072294;GBCB01107480;XM_005411943 XP_005412000 MODEL 8728093 pseudo LOC102003912 S-phase kinase-associated protein 1 pseudogene NW_004955442 6806797 6817973 + 102003912 AGCD01037597;AGCD01037598;AGCD01037599 MODEL 9017705 ncrna LOC102014402 uncharacterized LOC102014402 NW_004955450 3355114 3379108 - 102014402 AGCD01042430;AGCD01042431;AGCD01042432;GBDF01195206;XR_262524 MODEL 8921901 protein-coding Aco1 aconitase 1 ENCODES a protein that exhibits 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); aconitate hydratase activity (ortholog); INVOLVED IN citrate metabolic process (ortholog); intestinal absorption (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN doxorubicin response pathway; iron homeostasis pathway; ASSOCIATED WITH Chronic Allograft Nephropathy (ortholog); Chronic Cerebral Hypoperfusion (ortholog); duodenal ulcer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955472 3141473 3170959 - 102015311 AGCD01053504;GBBH01089727;XM_013522946 XP_013378400 MODEL 39131459 protein-coding GRIN2D glutamate ionotropic receptor NMDA type subunit 2D 9049273 pseudo LOC102016253 E3 ubiquitin-protein ligase makorin-1 pseudogene NW_004955412 15316407 15318427 - 102016253 AGCD01012870 MODEL 8950182 protein-coding Epb41l5 erythrocyte membrane protein band 4.1 like 5 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); apical constriction (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cell leading edge (ortholog); focal adhesion (ortholog); plasma membrane (ortholog) NW_004955459 9641926 9783718 - 102017547 AGCD01048164;AGCD01048165;AGCD01048166;AGCD01048167;AGCD01048168;AGCD01048169;AGCD01048170;AGCD01048171;GBCE01115046;XM_005397654;XM_005397658;XM_005397659 XP_005397711;XP_005397715;XP_005397716 MODEL 10384267 ncrna LOC106149988 uncharacterized LOC106149988 NW_004955459 8729835 8753453 + 106149988 AGCD01048145;GBDJ01118067;XR_001236496 MODEL 8706130 protein-coding Abca12 ATP binding cassette subfamily A member 12 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); lipid transporter activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN ceramide metabolic process (ortholog); ceramide transport (ortholog); corneocyte desquamation (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog); autosomal recessive congenital ichthyosis 4A (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); epidermal lamellar body (ortholog) NW_004955457 885941 1062713 + 102020422 AGCD01046716;AGCD01046717;AGCD01046718;GBCQ01127755;XM_013520777 XP_013376231 MODEL 8866514 protein-coding Ctdspl2 CTD small phosphatase like 2 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); embryonic skeletal system development (ortholog); FOUND IN nucleus (ortholog) NW_004955416 10970487 11046179 + 102015840 AGCD01017169;AGCD01017170;AGCD01017171;GBDF01158268;XM_005381416;XM_005381418;XM_013512468 XP_005381473;XP_005381475;XP_013367922 MODEL 8891615 protein-coding Dkkl1 dickkopf like acrosomal protein 1 INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of testosterone biosynthetic process (ortholog); penetration of zona pellucida (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955559 1445082 1449167 - 102018660 AGCD01073646;GBDF01002816;XM_005412889;XM_005412890 XP_005412946;XP_005412947 MODEL 9004116 protein-coding Ano4 anoctamin 4 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); endometriosis (ortholog); generalized epilepsy with febrile seizures plus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 36350013 36715740 + 102023552 AGCD01005417;AGCD01005418;AGCD01005419;AGCD01005420;AGCD01005421;AGCD01005422;AGCD01005423;AGCD01005424;AGCD01005425;GBCE01103559;XM_005374542;XM_013518664 XP_005374599;XP_013374118 MODEL 8872496 protein-coding Esyt1 extended synaptotagmin 1 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid transfer activity (ortholog); INVOLVED IN intermembrane lipid transfer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955458 3732968 3746856 + 102026723 AGCD01047340;AGCD01047341;AGCD01047342;GBCQ01033561;GBDK01346750;XM_013520965 XP_013376419 MODEL 8941068 pseudo LOC102021152 serine/threonine-protein kinase PRP4 homolog NW_004955428 20318156 20321687 - 102021152 AGCD01028108;XR_261306 MODEL 8757403 protein-coding Igfbpl1 insulin like growth factor binding protein like 1 INVOLVED IN cellular response to tumor cell (ortholog); FOUND IN extracellular space (ortholog) NW_004955419 28133512 28148462 + 102010489 AGCD01020459;AGCD01020460;GBBH01048948;XM_013513091 XP_013368545 MODEL 9014292 protein-coding LOC102008596 keratin-associated protein 20-2-like NW_004955407 30188698 30188859 + 102008596 AGCD01007628;XM_005375645 XP_005375702 MODEL 8941615 protein-coding LOC102012885 olfactory receptor 1052-like NW_004955511 1009362 1010300 + 102012885 AGCD01066353;XM_005408220 XP_005408277 MODEL 8899113 protein-coding LOC102011255 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1233166 1237734 - 102011255 AGCD01074465;GBDF01000430;XM_005413374 XP_005413431 MODEL 9005781 protein-coding CUNH2orf69 chromosome unknown C2orf69 homolog INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 53 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955403 1349489 1352541 - 102022772 AGCD01001717;GBCB01073853;XM_013511947 XP_013367401 MODEL 8864058 protein-coding LOC102014769 olfactory guanylyl cyclase GC-D-like NW_004955414 15178093 15274125 + 102014769 AGCD01015181;AGCD01015182;XM_005380447 XP_005380504 MODEL 9031914 protein-coding LOC102020379 cytochrome c oxidase subunit 4 isoform 1, mitochondrial INVOLVED IN response to nutrient (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 16 (ortholog); mitochondrial metabolism disease (ortholog); protein-energy malnutrition (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955541 885824 890824 + 102020379 AGCD01071364;GBBH01003940;GBCB01002429;XM_005410982 XP_005411039 MODEL 8742146 pseudo LOC102013288 T-cell activation inhibitor, mitochondrial-like NW_004955415 31054123 31073082 + 102013288 AGCD01016669 MODEL 8776745 protein-coding Defb119 defensin beta 119 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN innate immune response (ortholog); ASSOCIATED WITH female reproductive system disease (ortholog) NW_004955422 29544805 29550815 + 102024021 AGCD01023401;GBDF01006575;XM_005384921 XP_005384978 MODEL 8854866 protein-coding Kcp kielin cysteine rich BMP regulator INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); positive regulation of BMP signaling pathway (ortholog); FOUND IN extracellular space (ortholog) NW_004955479 9670430 9727275 - 102023909 AGCD01056486;AGCD01056487;AGCD01056488;AGCD01056489;AGCD01056490;AGCD01056491;AGCD01056492;AGCD01056493;AGCD01056494;GBBH01155393;GBDI01225998;XM_013503259 XP_013358713 MODEL 8853429 protein-coding Htr3a 5-hydroxytryptamine receptor 3A ENCODES a protein that exhibits identical protein binding (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); serotonin binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to growth factor stimulus (ortholog); positive regulation of ion transmembrane transporter activity (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); cleavage furrow (ortholog); glutamatergic synapse (ortholog) NW_004955412 15589117 15602211 + 102010883 AGCD01012882;XM_005378151;XM_005378152 XP_005378208;XP_005378209 MODEL 8901502 protein-coding Ina internexin neuronal intermediate filament protein alpha ENCODES a protein that exhibits protein-containing complex binding (ortholog); structural constituent of postsynaptic intermediate filament cytoskeleton (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); intermediate filament cytoskeleton organization (ortholog); neurofilament cytoskeleton organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); High Myopia (ortholog); Lupus Vasculitis, Central Nervous System (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); glutamatergic synapse (ortholog); neurofilament (ortholog) NW_004955485 7238723 7266995 - 102014787 AGCD01058648;AGCD01058649;GBDF01213804;XM_005403924 XP_005403981 MODEL 8756917 protein-coding LOC102017776 uncharacterized LOC102017776 NW_004955420 25040524 25045906 + 102017776 AGCD01021341;GBCQ01153372;XM_005383415 XP_005383472 MODEL 8960089 protein-coding Dcaf12l2 DDB1 and CUL4 associated factor 12 like 2 NW_004955473 8744863 8746589 + 102016914 AGCD01054058;XM_005401272 XP_005401329 MODEL 8929502 protein-coding LOC102015506 amyloid protein A-like NW_004955414 32956958 32961540 - 102015506 AGCD01015791;GBDI01019735;XM_005380400;XM_005380401;XM_013511904 XP_005380457;XP_005380458;XP_013367358 MODEL 39133953 misc_rna 7SK 7SK RNA 8767672 ncrna LOC102007879 uncharacterized LOC102007879 NW_004955413 30303353 30306413 - 102007879 AGCD01014605;GBDJ01200944;XR_260137 MODEL 9033706 protein-coding Defb121 defensin beta 121 NW_004955422 29525435 29526857 + 102006362 AGCD01023401;GBDJ01258373;XM_005384992 XP_005385049 MODEL 8788376 pseudo LOC102008246 olfactory receptor 5A1-like NW_004955511 3810447 3812052 - 102008246 AGCD01066476 MODEL 39134217 misc_rna 7SK 7SK RNA 8714189 protein-coding Dtd1 D-aminoacyl-tRNA deacylase 1 ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN mitochondrion (ortholog) NW_004955415 27089117 27195034 + 102018386 AGCD01016622;AGCD01016623;GBDF01081467;XM_005380934;XM_005380935 XP_005380991;XP_005380992 MODEL 8710139 protein-coding Jrk Jrk helix-turn-helix protein ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH childhood absence epilepsy (ortholog); generalized epilepsy (ortholog); juvenile myoclonic epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) NW_004955454 1415811 1423705 - 102019566 AGCD01044968;GBDI01323657;XM_005395734;XM_013520234;XM_013520235 XP_005395791;XP_013375688;XP_013375689 MODEL 39132157 rrna 5S_rRNA 5S ribosomal RNA 8994071 protein-coding Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); translation repressor activity (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); memory (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); neuronal ribonucleoprotein granule (ortholog); postsynapse (ortholog) NW_004955437 20844750 20879874 - 102013760 AGCD01034888;AGCD01034889;AGCD01034890;GBDI01072458;XM_005390059;XM_013517009 XP_005390116;XP_013372463 MODEL 8852622 ncrna LOC102009373 uncharacterized LOC102009373 NW_004955471 267562 303293 + 102009373 AGCD01052952;AGCD01052953;AGCD01052954;GBDK01102526;XR_001237060;XR_263510 MODEL 8914907 ncrna LOC102014006 uncharacterized LOC102014006 NW_004955405 33602692 33668908 + 102014006 AGCD01005360;GBDF01094861;XR_001236072;XR_259427 MODEL 8797130 protein-coding Fem1c fem-1 homolog C ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) NW_004955408 35291791 35315628 - 102023006 AGCD01008937;GBDF01003668;XM_013506925 XP_013362379 MODEL 8773909 protein-coding LOC102009769 olfactory receptor 7G2-like NW_004955563 256431 260592 + 102009769 AGCD01074056;AGCD01074057;XM_005413198 XP_005413255 MODEL 9047479 pseudo LOC102013643 DEP domain-containing protein 1A-like NW_004955433 16183789 16212486 - 102013643 AGCD01031790 MODEL 8998880 protein-coding LOC102014403 late cornified envelope protein 1A-like NW_004955592 666311 667795 - 102014403 AGCD01076320;GBCC01001016;XM_005414623 XP_005414680 MODEL 8864384 protein-coding C1d C1D nuclear receptor corepressor ENCODES a protein that exhibits DNA binding (ortholog); nuclear receptor binding (ortholog); RNA binding (ortholog); INVOLVED IN maturation of 5.8S rRNA (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); transcription repressor complex (ortholog) NW_004955424 16787094 16801600 + 102024132 AGCD01024753;GBDF01045582;XM_013514751 XP_013370205 MODEL 8849276 protein-coding LOC102020380 olfactory receptor 12-like NW_004955542 1157297 1158244 - 102020380 AGCD01071490;XM_005411172 XP_005411229 MODEL 8804119 ncrna LOC102005727 uncharacterized LOC102005727 NW_004955424 19528323 19533322 + 102005727 AGCD01024829;GBDI01309346;XR_261083 MODEL 9057926 ncrna LOC102010517 uncharacterized LOC102010517 NW_004955530 2532397 2639683 + 102010517 AGCD01069921;AGCD01069922;AGCD01069923;AGCD01069924;AGCD01069925;AGCD01069926;AGCD01069927;GBDF01160127;XR_001231996;XR_001231997;XR_001231998;XR_264710 MODEL 8706051 ncrna LOC102015894 uncharacterized LOC102015894 NW_004955440 9879399 9883532 - 102015894 AGCD01036385;XR_001235270 MODEL 9017592 ncrna LOC102008997 uncharacterized LOC102008997 NW_004955402 56853757 56893100 + 102008997 AGCD01001479;GBDF01111279;XR_001230748;XR_259106 MODEL 39131744 rrna 5S_rRNA 5S ribosomal RNA 8701757 pseudo LOC102016623 60S ribosomal protein L7-like NW_004955508 3685302 3686073 + 102016623 AGCD01065828 MODEL 8928362 protein-coding Epb42 erythrocyte membrane protein band 4.2 INVOLVED IN cell morphogenesis (ortholog); hemoglobin metabolic process (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spherocytosis (ortholog); hereditary spherocytosis type 1 (ortholog); FOUND IN ankyrin-1 complex (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) NW_004955416 9784211 9800453 - 102029963 AGCD01017099;GBBH01193362;XM_005381368 XP_005381425 MODEL 8849789 protein-coding Ano5 anoctamin 5 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); plasma membrane repair (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog); vesicle (ortholog) NW_004955476 2705596 2777848 + 102009046 AGCD01055234;GBCB01020533;GBCB01020534;XM_013503010 XP_013358464 MODEL 8818388 protein-coding LOC102024584 NUT family member 2G NW_004955422 23875419 23883131 + 102024584 AGCD01023210;GBDF01010838;XM_013513990;XM_013513991 XP_013369444;XP_013369445 MODEL 8840223 protein-coding Igflr1 IGF like family receptor 1 FOUND IN plasma membrane (ortholog) NW_004955468 2806612 2812751 + 102018710 AGCD01051838;GBCE01043528;XM_013522291 XP_013377745 MODEL 8744818 protein-coding LOC102011261 vomeronasal type-1 receptor 4-like NW_004955584 575353 576579 - 102011261 AGCD01075948;XM_005414368 XP_005414425 MODEL 9006095 protein-coding Esyt2 extended synaptotagmin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955579 971556 1052575 - 102006404 AGCD01075561;AGCD01075562;AGCD01075563;AGCD01075564;GBDJ01073043;XM_013509669 XP_013365123 MODEL 8958004 pseudo LOC102013293 60S ribosomal protein L12-like NW_004955418 2871913 2872420 + 102013293 AGCD01018776 MODEL 9044104 protein-coding LOC102021890 guanylate-binding protein 6-like NW_004955423 4714157 4742518 + 102021890 AGCD01023543;AGCD01023544;AGCD01023545;GBDF01110686;XM_005385352 XP_005385409 MODEL 8798140 pseudo LOC102003915 SAFB-like transcription modulator NW_004955445 12049621 12053924 - 102003915 AGCD01039731 MODEL 8702353 ncrna LOC102012107 uncharacterized LOC102012107 NW_004955504 1489501 1499030 + 102012107 AGCD01064841;GBDI01349444;XR_264287 MODEL 8785587 protein-coding Jrkl JRK like NW_004955412 1209524 1212911 + 102005349 AGCD01012512;GBCE01108644;GBCQ01176148;XM_005377959 XP_005378016 MODEL 8809741 protein-coding Grin3a glutamate ionotropic receptor NMDA type subunit 3A ENCODES a protein that exhibits calcium channel activity (ortholog); glutamate-gated receptor activity (ortholog); glycine binding (ortholog); INVOLVED IN calcium ion transport (ortholog); dendrite development (ortholog); ionotropic glutamate receptor signaling pathway (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH impotence (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955419 24105360 24272533 + 102007018 AGCD01020338;AGCD01020339;AGCD01020340;GBDF01095512;XM_005382793;XM_013513084 XP_005382850;XP_013368538 MODEL 10296320 ncrna LOC106149989 uncharacterized LOC106149989 NW_004955460 8061251 8065462 - 106149989 AGCD01048512;GBCB01056225;XR_001236500;XR_001236501 MODEL 8728967 ncrna LOC102011728 uncharacterized LOC102011728 NW_004955405 4802647 4833270 - 102011728 AGCD01004653;AGCD01004654;AGCD01004655;GBDF01208522;XR_001235207;XR_259362 MODEL 8820253 protein-coding LOC102007886 putative olfactory receptor 52P1 NW_004955414 21670016 21670951 - 102007886 AGCD01015426;XM_005380499 XP_005380556 MODEL 8911676 protein-coding Dlat dihydrolipoamide S-acetyltransferase ENCODES a protein that exhibits acetyltransferase activity (ortholog); dihydrolipoyllysine-residue acetyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN pyruvate catabolic process (ortholog); pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) NW_004955412 13718091 13746220 + 102026618 AGCD01012844;GBDF01122953;XM_005378107 XP_005378164 MODEL 8805934 protein-coding LOC102021156 olfactory receptor 8J2-like NW_004955511 5102711 5103658 + 102021156 AGCD01066549;XM_005408084 XP_005408141 MODEL 39134218 misc_rna 7SK 7SK RNA 9020712 protein-coding LOC102008598 keratin-associated protein 10-7-like NW_004955407 41534110 41537176 - 102008598 AGCD01007870;XM_013505446 XP_013360900 MODEL 8989259 protein-coding LOC102012891 uncharacterized LOC102012891 NW_004955523 1028153 1037283 - 102012891 AGCD01068489;GBCE01116809;XM_013507151;XR_001231927;XR_001231928;XR_001231929;XR_001231930;XR_001231931;XR_001231932;XR_001231933;XR_001231934;XR_001231935;XR_001231936;XR_001231937 XP_013362605 MODEL 8873907 protein-coding LOC102019362 low affinity sodium-glucose cotransporter-like NW_004955455 6325614 6404676 - 102019362 AGCD01045787;AGCD01045788;AGCD01045789;AGCD01045790;AGCD01045791;AGCD01045792;GBDI01239871;XM_005396351;XM_005396352 XP_005396408;XP_005396409 MODEL 9032392 protein-coding LOC102011733 cytochrome b-c1 complex subunit 9 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955455 4013197 4015448 + 102011733 AGCD01045662;GBDF01008630;XM_005396224 XP_005396281 MODEL 8720070 pseudo LOC102016255 S-phase kinase-associated protein 1 pseudogene NW_004955413 32899725 32900339 - 102016255 AGCD01014649;XM_005379524 MODEL 8847419 protein-coding LOC102015510 collagen alpha-1(II) chain-like NW_004955415 32621242 32628550 - 102015510 AGCD01016728;GBDJ01008308;XM_005381144 XP_005381201 MODEL 9016820 protein-coding LOC102021163 cadherin-related family member 3 NW_004955517 2064891 2152364 + 102021163 AGCD01067615;AGCD01067616;AGCD01067617;AGCD01067618;AGCD01067619;GBDI01002490;XM_005409033;XM_005409034 XP_005409090;XP_005409091 MODEL 39133954 misc_rna 7SK 7SK RNA 8831627 protein-coding Dcaf13 DDB1 and CUL4 associated factor 13 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN decidualization (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); oocyte growth (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleolus (ortholog) NW_004955417 27545128 27567829 + 102022497 AGCD01018559;GBDF01049536;XM_005381951 XP_005382008 MODEL 8859305 protein-coding LOC102011263 cornifin-B NW_004955592 410702 412632 - 102011263 AGCD01076312;GBCC01001188;XM_005414616 XP_005414673 MODEL 10102463 protein-coding Ctf1 cardiotrophin 1 ENCODES a protein that exhibits cytokine activity (ortholog); leukemia inhibitory factor receptor binding (ortholog); INVOLVED IN leukemia inhibitory factor signaling pathway (ortholog); nervous system development (ortholog); neuron development (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog) NW_004955493 7735996 7737559 + 106146727 AGCD01061222;GBCE01176310;GBDI01227883;XM_013504887 XP_013360341 MODEL 8898926 protein-coding Abca13 ATP binding cassette subfamily A member 13 INVOLVED IN ceramide transport (ortholog); positive regulation of cholesterol transport (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Disease Progression (ortholog); gastric adenocarcinoma (ortholog); FOUND IN intracellular vesicle (ortholog) NW_004955456 4977504 5341259 - 102006422 AGCD01046315;AGCD01046316;AGCD01046317;AGCD01046318;AGCD01046319;AGCD01046320;AGCD01046321;AGCD01046322;AGCD01046323;AGCD01046324;AGCD01046325;AGCD01046326;AGCD01046327;GBBH01203320;XM_013520510 XP_013375964 MODEL 8704083 ncrna LOC102020382 uncharacterized LOC102020382 NW_004955439 14686866 14703870 + 102020382 AGCD01035985;GBBH01173721;XR_261991 MODEL 8724206 protein-coding Defb123 defensin beta 123 NW_004955422 29494221 29496697 - 102023372 AGCD01023399;GBDF01049661;XM_005384919 XP_005384976 MODEL 8992393 protein-coding Creb3 cAMP responsive element binding protein 3 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); CCR1 chemokine receptor binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); endoplasmic reticulum unfolded protein response (ortholog); induction of positive chemotaxis (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955472 564227 568708 - 102008716 AGCD01053341;GBCQ01062428;XM_005401006 XP_005401063 MODEL 8771102 protein-coding Dtd2 D-aminoacyl-tRNA deacylase 2 ENCODES a protein that exhibits Ala-tRNA(Thr) deacylase activity (ortholog); D-tyrosyl-tRNA(Tyr) deacylase activity (ortholog); INVOLVED IN aminoacyl-tRNA metabolism involved in translational fidelity (ortholog) NW_004955409 29151779 29160734 + 102011182 AGCD01010253;GBBH01016347;XM_005376956 XP_005377013 MODEL 8815125 ncrna LOC102014770 uncharacterized LOC102014770 NW_004955472 3065185 3067198 - 102014770 AGCD01053500;GBDF01049456;XR_263548 MODEL 8795867 pseudo LOC102020747 IST1 homolog pseudogene NW_004955404 18325439 18332599 + 102020747 AGCD01003612 MODEL 39131360 protein-coding EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3 39132158 rrna 5S_rRNA 5S ribosomal RNA 9061870 protein-coding LOC102024586 olfactory receptor 7E24-like NW_004955495 767666 768702 + 102024586 AGCD01061653;XM_013505093 XP_013360547 MODEL 8797847 protein-coding Inafm2 InaF motif containing 2 NW_004955416 7251468 7253776 + 102018596 AGCD01016971;GBBH01076529;GBDI01296119;XM_013512601 XP_013368055 MODEL 8740920 protein-coding LOC102009376 olfactory receptor 13J1 NW_004955472 452846 454056 + 102009376 AGCD01053339;XM_005401175 XP_005401232 MODEL 39131414 protein-coding KCP kielin cysteine rich BMP regulator 8805710 protein-coding Fen1 flap structure-specific endonuclease 1 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-flap endonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); DNA replication (ortholog); DNA replication, removal of RNA primer (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); autoimmune disease (ortholog); breast cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955511 5918667 5922506 - 102008650 AGCD01066592;GBCQ01122297;XM_005408136 XP_005408193 MODEL 8994246 protein-coding Htr3b 5-hydroxytryptamine receptor 3B ENCODES a protein that exhibits serotonin-gated monoatomic cation channel activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); positive regulation of ion transmembrane transporter activity (ortholog); serotonin receptor signaling pathway (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Cocaine-Related Disorders (ortholog); depressive disorder (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); neuronal cell body (ortholog) NW_004955412 15524854 15569638 + 102017211 AGCD01012879;AGCD01012880;AGCD01012881;AGCD01012882;GBDF01107879;XM_005378625 XP_005378682 MODEL 9056069 protein-coding Clba1 clathrin binding box of aftiphilin containing 1 NW_004955538 3325052 3340534 + 102030237 AGCD01071159;AGCD01071160;GBCE01153411;XM_005410851;XM_005410852;XM_013507884;XM_013507885;XM_013507887 XP_005410908;XP_005410909;XP_013363338;XP_013363339;XP_013363341 MODEL 8904017 ncrna LOC102013650 uncharacterized LOC102013650 NW_004955547 653716 654466 - 102013650 AGCD01072171;GBDI01166441;XR_001232231 MODEL 8728284 protein-coding Igfn1 immunoglobulin like and fibronectin type III domain containing 1 INVOLVED IN myoblast differentiation (ortholog); myoblast fusion (ortholog); myotube differentiation (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); FOUND IN nucleus (ortholog); Z disc (ortholog) NW_004955406 37332936 37363694 + 102010865 AGCD01006574;AGCD01006575;GBCE01003380;XM_005375163;XM_013522126;XM_013522134;XM_013522139;XM_013522143 XP_005375220;XP_013377580;XP_013377588;XP_013377593;XP_013377597 MODEL 8957307 pseudo LOC102014408 OCIA domain-containing protein 2 pseudogene NW_004955404 1513800 1514203 + 102014408 AGCD01003224 MODEL 8864407 protein-coding C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); intestinal epithelial cell development (ortholog); kidney development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN membrane (ortholog) NW_004955432 14298873 14353824 + 102025281 AGCD01031042;GBBH01190693;XM_005388090 XP_005388147 MODEL 9020056 protein-coding Esyt3 extended synaptotagmin 3 FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955501 537195 585640 - 102016293 AGCD01064032;AGCD01064033;AGCD01064034;GBDJ01208218;GBDK01433210;XM_005406863 XP_005406920 MODEL 8791738 pseudo LOC102008247 anaphase-promoting complex subunit 7 pseudogene NW_004955430 15868219 15872040 - 102008247 AGCD01029620 MODEL 8767644 ncrna LOC102005728 uncharacterized LOC102005728 NW_004955424 27059476 27098465 + 102005728 AGCD01025100;GBDF01207365;XR_261110;XR_261111 MODEL 8999601 protein-coding LOC102015899 kallikrein-4-like NW_004955559 349640 357295 - 102015899 AGCD01073578;XM_005412969 XP_005413026 MODEL 8984881 protein-coding LOC102021164 serine/arginine repetitive matrix protein 2-like NW_004955519 3830018 3830847 - 102021164 AGCD01067970;XM_005409184 XP_005409241 MODEL 8767494 protein-coding CUNH2orf74 chromosome unknown C2orf74 homolog ASSOCIATED WITH visceral heterotaxy (ortholog) NW_004955424 22709676 22712178 - 102024590 AGCD01024981;GBDF01045251;XM_013514609;XM_013514610;XR_001234161 XP_013370063;XP_013370064 MODEL 8715664 pseudo LOC102016624 oxidative stress-responsive serine-rich protein 1 pseudogene NW_004955430 7526938 7528180 - 102016624 AGCD01029355 MODEL 9065152 pseudo LOC102015512 vesicle-associated membrane protein 3-like NW_004955416 10951825 10952960 + 102015512 AGCD01017166 MODEL 10351448 pseudo LOC106149990 cytokine receptor common subunit gamma pseudogene NW_004955460 13238976 13239916 + 106149990 AGCD01048676 MODEL 8893093 ncrna LOC102014009 uncharacterized LOC102014009 NW_004955406 20130414 20137527 - 102014009 AGCD01006098;GBDF01144134;XR_259501 MODEL 8931860 protein-coding Epc1 enhancer of polycomb homolog 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression, epigenetic (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Neointima (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear body (ortholog); nuclear membrane (ortholog) NW_004955429 23819261 23910279 - 102005825 AGCD01029081;AGCD01029082;AGCD01029083;GBCE01136615;XM_005387225;XM_013515434 XP_005387282;XP_013370888 MODEL 8795757 pseudo LOC102017778 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955421 538591 539793 - 102017778 AGCD01021566 MODEL 9028114 protein-coding Ano6 anoctamin 6 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); identical protein binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); bleb assembly (ortholog); blood coagulation (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); Congenital Hydrocephalus 2, with or without Brain or Eye Anomalies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chloride channel complex (ortholog); cholinergic synapse (ortholog); plasma membrane (ortholog) NW_004955500 4462314 4652634 + 102008642 AGCD01063796;AGCD01063797;AGCD01063798;AGCD01063799;AGCD01063800;AGCD01063801;AGCD01063802;AGCD01063803;AGCD01063804;AGCD01063805;GBDK01110938;XM_005406593;XM_013505696;XM_013505697;XM_013505698;XM_013505699 XP_005406650;XP_013361150;XP_013361151;XP_013361152;XP_013361153 MODEL 9005771 ncrna LOC102020748 uncharacterized LOC102020748 NW_004955405 18807578 18812159 + 102020748 AGCD01005027;GBCB01057815;XR_259389 MODEL 8777890 ncrna LOC102021894 uncharacterized LOC102021894 NW_004955424 22221862 22225679 - 102021894 AGCD01024945;AGCD01024946;GBDI01244494;XR_261100 MODEL 8826553 protein-coding Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ENCODES a protein that exhibits kinase binding (ortholog); mRNA binding (ortholog); nuclear export signal receptor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); mRNA stabilization (ortholog); negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955455 5612087 5660543 - 102009460 AGCD01045743;AGCD01045744;AGCD01045745;AGCD01045746;GBDK01183925;XM_005396313;XM_005396314;XM_005396315;XM_005396316 XP_005396370;XP_005396371;XP_005396372;XP_005396373 MODEL 8930574 protein-coding LOC102012115 retinal dehydrogenase 1-like NW_004955512 5973700 6028923 - 102012115 AGCD01066790;AGCD01066791;AGCD01066792;AGCD01066793;AGCD01066794;AGCD01066795;AGCD01066796;AGCD01066797;AGCD01066798;AGCD01066799;AGCD01066800;AGCD01066801;GBCQ01010585;GBDK01002218;XM_013506549 XP_013362003 MODEL 8929960 protein-coding LOC102009002 KN motif and ankyrin repeat domain-containing protein 2-like NW_004955774 14744 24159 - 102009002 AGCD01078322;AGCD01078323;AGCD01078324;GBCQ01009072;GBDJ01022892;XM_013510190 XP_013365644 MODEL 39131745 rrna 5S_rRNA 5S ribosomal RNA 39133955 misc_rna 7SK 7SK RNA 39131563 protein-coding DEFB124 defensin beta 124 9020582 protein-coding Cth cystathionine gamma-lyase ENCODES a protein that exhibits cystathionine gamma-lyase activity (ortholog); identical protein binding (ortholog); L-cystine L-cysteine-lyase (deaminating) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glutathione metabolic process (ortholog); hydrogen sulfide biosynthetic process (ortholog); PARTICIPATES IN cystathioninuria pathway; cysteine metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); cataract (ortholog); cystathioninuria (ortholog) NW_004955423 21542587 21567935 - 102005725 AGCD01023945;GBCQ01034035;XM_005385247 XP_005385304 MODEL 39134223 misc_rna 7SK 7SK RNA 8815736 protein-coding LOC102012892 uncharacterized LOC102012892 NW_004955526 2993975 3028797 + 102012892 AGCD01069325;AGCD01069326;XM_013507354 XP_013362808 MODEL 8802081 protein-coding Creb3l1 cAMP responsive element binding protein 3 like 1 ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); extracellular matrix constituent secretion (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH genetic disease (ortholog); osteogenesis imperfecta type 16 (ortholog); teratoma (ortholog); FOUND IN chromatin (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955422 1702131 1734603 - 102011778 AGCD01022470;AGCD01022471;GBCE01077257;XM_005384039 XP_005384096 MODEL 8958547 protein-coding LOC102013296 olfactory receptor 14A2-like NW_004955418 30355010 30355939 - 102013296 AGCD01019514;XM_005382373 XP_005382430 MODEL 8805275 protein-coding LOC102019365 A-kinase anchor protein 5-like NW_004955408 12165200 12166481 + 102019365 AGCD01008329;XM_013508842 XP_013364296 MODEL 8967469 protein-coding Dthd1 death domain containing 1 ASSOCIATED WITH fundus dystrophy (ortholog); muscular dystrophy (ortholog); Norum disease (ortholog) NW_004955443 10444916 10501215 - 102012032 AGCD01038377;AGCD01038378;GBDI01000525;XM_005392015 XP_005392072 MODEL 8959350 protein-coding Jsrp1 junctional sarcoplasmic reticulum protein 1 INVOLVED IN protein localization to membrane (ortholog); regulation of ryanodine-sensitive calcium-release channel activity (ortholog); FOUND IN sarcoplasmic reticulum (ortholog) NW_004955495 5886008 5893227 + 102015026 AGCD01062042;AGCD01062043;GBCB01004545;XM_005405906;XM_005405907;XM_005405909;XM_005405910;XM_005405912;XM_013505250 XP_005405963;XP_005405964;XP_005405966;XP_005405967;XP_005405969;XP_013360704 MODEL 8795159 protein-coding Epc2 enhancer of polycomb 2 INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH type 2 diabetes mellitus (ortholog) NW_004955440 14573960 14645171 + 102026045 AGCD01036473;GBDK01240424;XM_005390801 XP_005390858 MODEL 8770722 protein-coding LOC102024589 hypoxanthine-guanine phosphoribosyltransferase-like NW_004955498 4154694 4155460 - 102024589 AGCD01062973;XM_005406405 XP_005406462 MODEL 8925030 pseudo LOC102016258 60S ribosomal protein L26 pseudogene NW_004955414 20216393 20216831 + 102016258 AGCD01015364 MODEL 8790672 protein-coding Grin3b glutamate ionotropic receptor NMDA type subunit 3B ENCODES a protein that exhibits calcium channel activity (ortholog); glycine binding (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN cellular response to glycine (ortholog); ionotropic glutamate receptor signaling pathway (ortholog); monoatomic cation transmembrane transport (ortholog); PARTICIPATES IN excitatory synaptic transmission pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); neuronal cell body (ortholog); neurotransmitter receptor complex (ortholog) NW_004955495 6859909 6866297 - 102016070 AGCD01062098;GBDF01262578;XM_013505060 XP_013360514 MODEL 8877149 pseudo LOC102011265 E3 ubiquitin-protein ligase RNF13 pseudogene NW_004955450 12920957 12924698 - 102011265 AGCD01042721 MODEL 8962040 protein-coding LOC102013653 carcinoembryonic antigen-related cell adhesion molecule 3 NW_004955555 1015663 1019840 - 102013653 AGCD01073055;GBDI01085734;XM_005415410 XP_005415467 MODEL 8821153 protein-coding LOC102010524 protein S100-A6-like NW_004955545 107981 108711 - 102010524 AGCD01071767;XM_005411404 XP_005411461 MODEL 9059329 protein-coding Kctd1 potassium channel tetramerization domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Familial Cirrhosis (ortholog); scalp-ear-nipple syndrome (ortholog); FOUND IN nucleus (ortholog) NW_004955402 14478702 14573154 - 102014191 AGCD01000431;AGCD01000432;GBDJ01018565;XM_005372731;XM_013505731 XP_005372788;XP_013361185 MODEL 8738154 ncrna LOC102014410 uncharacterized LOC102014410 NW_004955405 34465027 34476792 - 102014410 AGCD01005375;GBDF01265724;XR_001235745;XR_259429 MODEL 8711564 protein-coding Aco2 aconitase 2 ENCODES a protein that exhibits 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); aconitate hydratase activity (ortholog); INVOLVED IN citrate metabolic process (ortholog); isocitrate metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); adult respiratory distress syndrome (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955413 27027341 27065227 + 102019378 AGCD01014491;GBDF01000245;XM_005379352 XP_005379409 MODEL 8895212 protein-coding Dcaf15 DDB1 and CUL4 associated factor 15 ENCODES a protein that exhibits small molecule binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); regulation of natural killer cell activation (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955415 32701701 32710051 + 102008091 AGCD01016730;AGCD01016731;GBCE01001095;XM_005381076 XP_005381133 MODEL 8817470 protein-coding Clca1 chloride channel accessory 1 INVOLVED IN cellular response to hypoxia (ortholog); ASSOCIATED WITH asbestosis (ortholog); asthma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN membrane (ortholog); microvillus (ortholog); secretory granule (ortholog) NW_004955423 7684741 7714438 - 102021459 AGCD01023610;GBDI01162443;XM_005385128 XP_005385185 MODEL 8997933 protein-coding LOC102007889 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like NW_004955476 1983725 1985174 + 102007889 AGCD01055217;GBDF01044591;XM_005401726 XP_005401783 MODEL 8737893 protein-coding C1galt1c1 C1GALT1 specific chaperone 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN platelet activation (ortholog); platelet morphogenesis (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); congenital disorder of glycosylation (ortholog); HEMOLYTIC UREMIC SYNDROME, ATYPICAL, 8, WITH RHIZOMELIC SHORT STATURE (ortholog) NW_004955572 1254289 1258561 + 102030253 AGCD01074947;GBBH01193344;XM_005413651 XP_005413708 MODEL 8931344 protein-coding Abca2 ATP binding cassette subfamily A member 2 ENCODES a protein that exhibits ATP binding (ortholog); ceramide floppase activity (ortholog); endopeptidase regulator activity (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); ceramide translocation (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy 14 (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH POOR GROWTH AND WITH OR WITHOUT SEIZURES OR ATAXIA (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955513 5035879 5051140 - 102029101 AGCD01066951;GBCB01039194;GBDK01084651;XM_013506707 XP_013362161 MODEL 8846677 protein-coding LOC102020385 olfactory receptor 4K15-like NW_004955550 392606 393649 - 102020385 AGCD01072498;XM_005412129 XP_005412186 MODEL 8703873 protein-coding Dlc1 DLC1 Rho GTPase activating protein ENCODES a protein that exhibits GTPase activator activity (ortholog); phospholipase binding (ortholog); phospholipase C activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to insulin stimulus (ortholog); focal adhesion assembly (ortholog); PARTICIPATES IN Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH amenorrhea (ortholog); colon carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN actin filament (ortholog); caveola (ortholog); cortical actin cytoskeleton (ortholog) NW_004955463 3599415 3981187 + 102014429 AGCD01049591;AGCD01049592;AGCD01049593;AGCD01049594;AGCD01049595;AGCD01049596;AGCD01049597;AGCD01049598;AGCD01049599;AGCD01049600;GBCE01115032;XM_005398346;XM_013521500;XM_013521501;XM_013521502 XP_005398403;XP_013376954;XP_013376955;XP_013376956 MODEL 10327845 pseudo LOC102009773 Ig heavy chain V-III region 23-like NW_004955569 3800 4314 + 102009773 AGCD01074556 MODEL 8953516 pseudo LOC102008599 ATP synthase F(0) complex subunit C2, mitochondrial pseudogene NW_004955408 4475183 4478730 - 102008599 AGCD01008113 MODEL 8885015 protein-coding LOC102021165 chemokine-like factor NW_004955433 23108920 23126737 + 102021165 AGCD01031952;GBCE01152700;XM_005388467 XP_005388524 MODEL 8938224 protein-coding LOC102014776 olfactory receptor 226-like NW_004955477 11066632 11067570 - 102014776 AGCD01055714;XM_005402084 XP_005402141 MODEL 8830717 ncrna LOC102015514 uncharacterized LOC102015514 NW_004955478 7571236 7583201 - 102015514 AGCD01055980;AGCD01055981;GBCE01131674;XR_001230846;XR_001230847;XR_263704 MODEL 8763433 pseudo LOC102003918 stress-induced-phosphoprotein 1-like NW_004955447 5714882 5718387 - 102003918 AGCD01040769 MODEL 8822981 protein-coding Defb127 defensin beta 127 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog) NW_004955597 38613 40241 + 102025199 AGCD01076533;XM_005414733 XP_005414790 MODEL 8859967 protein-coding Inava innate immunity activator INVOLVED IN adherens junction maintenance (ortholog); innate immune response (ortholog); intestinal epithelial structure maintenance (ortholog); ASSOCIATED WITH inflammatory bowel disease (ortholog); inflammatory bowel disease 29 (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955406 37086302 37107221 + 102006977 AGCD01006571;GBDI01027678;XM_005375150;XM_005375151;XM_005375152 XP_005375207;XP_005375208;XP_005375209 MODEL 8936851 pseudo LOC102005731 UPF0711 protein C18orf21 pseudogene NW_004955426 5300983 5301585 + 102005731 AGCD01026120 MODEL 8970740 protein-coding LOC102008248 retinal dehydrogenase 1 NW_004955512 5877696 5918693 + 102008248 AGCD01066780;GBCQ01010586;GBDI01006910;XM_013506548 XP_013362002 MODEL 8974936 protein-coding Eif4g1 eukaryotic translation initiation factor 4 gamma 1 ENCODES a protein that exhibits ATP binding (ortholog); eukaryotic initiation factor 4E binding (ortholog); mRNA binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to nutrient levels (ortholog); energy homeostasis (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); late onset Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955420 23161541 23179788 - 102020675 AGCD01021230;AGCD01021231;GBBH01061725;GBDJ01083746;XM_013513357 XP_013368811 MODEL 8777714 pseudo LOC102013661 cullin-5-like NW_004955444 12502917 12505534 + 102013661 AGCD01039075 MODEL 39131746 rrna 5S_rRNA 5S ribosomal RNA 8839242 protein-coding CUNH2orf76 chromosome unknown C2orf76 homolog NW_004955459 10347766 10406189 + 102022890 AGCD01048186;AGCD01048187;AGCD01048188;GBBH01102075;GBDI01291657;XM_013521083;XM_013521084 XP_013376537;XP_013376538 MODEL 8703787 ncrna LOC102011736 uncharacterized LOC102011736 NW_004955456 6662166 6678865 - 102011736 AGCD01046375;GBDF01041115;XR_001236334 MODEL 8726919 ncrna LOC102020390 uncharacterized LOC102020390 NW_004955445 12888527 12928600 + 102020390 AGCD01039764;AGCD01039765;GBDF01222119;XR_262332 MODEL 10293046 protein-coding LOC106149993 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 9935365 9938039 - 106149993 AGCD01048564;XM_013521114 XP_013376568 MODEL 8811919 ncrna LOC102009377 uncharacterized LOC102009377 NW_004955474 7388629 7400816 + 102009377 AGCD01054519;GBDF01303398;XR_001230720;XR_263601 MODEL 8905162 protein-coding LOC102017785 60S acidic ribosomal protein P0-like NW_004955494 2559510 2560550 + 102017785 AGCD01061440;GBDF01135760;XM_013504925 XP_013360379 MODEL 8746877 protein-coding Ano8 anoctamin 8 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) NW_004955524 903750 912827 + 102008024 AGCD01068725;GBDI01261021;XM_005409528;XM_013507240 XP_005409585;XP_013362694 MODEL 9002490 ncrna LOC102019366 uncharacterized LOC102019366 NW_004955460 4440981 4449248 + 102019366 AGCD01048434;AGCD01048435;GBDF01155457;XR_263027 MODEL 8765969 pseudo LOC102020759 translationally-controlled tumor protein pseudogene NW_004955455 13068051 13113202 + 102020759 AGCD01046057 MODEL 8885922 protein-coding LOC102021895 melanoma-associated antigen 8-like NW_004955498 3686475 3687449 + 102021895 AGCD01062922;XM_005406479 XP_005406536 MODEL 8819312 protein-coding Htr4 5-hydroxytryptamine receptor 4 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); identical protein binding (ortholog); serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH Anorexia (ortholog); anorexia nervosa (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955415 5745056 5802409 + 102004471 AGCD01015998;AGCD01015999;AGCD01016000;AGCD01016001;XM_013512121 XP_013367575 MODEL 39131463 protein-coding IGHM immunoglobulin heavy constant mu 8872355 protein-coding Fer FER tyrosine kinase ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); lipid binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adherens junction assembly (ortholog); adherens junction disassembly (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH Duane retraction syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cell junction (ortholog) NW_004955418 5612919 5981549 - 102020666 AGCD01018846;AGCD01018847;AGCD01018848;AGCD01018849;AGCD01018850;AGCD01018851;AGCD01018852;AGCD01018853;AGCD01018854;AGCD01018855;AGCD01018856;AGCD01018857;AGCD01018858;AGCD01018859;GBDJ01217631;XM_005382177;XM_005382178;XM_013513026;XM_013513027 XP_005382234;XP_005382235;XP_013368480;XP_013368481 MODEL 8974411 protein-coding Dtl denticleless E3 ubiquitin protein ligase adapter ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955406 5256057 5299573 - 102023869 AGCD01005718;GBDF01043531;XM_005374751;XM_013520188;XM_013520193 XP_005374808;XP_013375642;XP_013375647 MODEL 8964944 protein-coding LOC102015901 vomeronasal type-1 receptor 2-like NW_004955569 988836 989759 - 102015901 AGCD01074631;XM_005413516 XP_005413573 MODEL 8955478 pseudo LOC102024591 dnaJ homolog subfamily C member 10 pseudogene NW_004955500 7129982 7156228 - 102024591 AGCD01063901;AGCD01063902 MODEL 8740892 protein-coding LOC102009003 glutamate receptor ionotropic, NMDA 2C NW_004956136 343 7674 - 102009003 AGCD01079116;GBCQ01125682;XM_005415170 XP_005415227 MODEL 9063925 protein-coding LOC102016625 olfactory receptor 1094-like NW_004955511 5057472 5058053 - 102016625 AGCD01066545;XM_013506354 XP_013361808 MODEL 39133956 misc_rna 7SK 7SK RNA 8857570 ncrna LOC102010525 uncharacterized LOC102010525 NW_004955440 3346013 3352979 + 102010525 AGCD01036240;GBBH01169042;XR_262002 MODEL 39131887 rrna 5S_rRNA 5S ribosomal RNA 8744904 ncrna LOC102014010 uncharacterized LOC102014010 NW_004955407 2961065 2985825 - 102014010 AGCD01006845;AGCD01006846;AGCD01006847;AGCD01006848;XR_259544 MODEL 39134224 misc_rna 7SK 7SK RNA 9045391 protein-coding Cthrc1 collagen triple helix repeat containing 1 ENCODES a protein that exhibits frizzled binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN cell migration (ortholog); cochlea morphogenesis (ortholog); establishment of planar polarity involved in neural tube closure (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955417 27520420 27525907 + 102021126 AGCD01018559;GBBH01218853;GBDF01208824;XM_013512691 XP_013368145 MODEL 8753974 protein-coding Dld dihydrolipoamide dehydrogenase ENCODES a protein that exhibits dihydrolipoyl dehydrogenase (NADH) activity (ortholog); flavin adenine dinucleotide binding (ortholog); lipoamide binding (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH dihydrolipoamide dehydrogenase deficiency (ortholog); genetic disease (ortholog); lactic acidosis (ortholog); FOUND IN acrosomal matrix (ortholog); branched-chain alpha-ketoacid dehydrogenase complex (ortholog); cilium (ortholog) NW_004955410 12212981 12238561 + 102008070 AGCD01010846;AGCD01010847;AGCD01010848;AGCD01010849;AGCD01010850;GBCE01096063;XM_005377291;XM_013510668 XP_005377348;XP_013366122 MODEL 8974066 ncrna LOC102013298 uncharacterized LOC102013298 NW_004955485 7764867 7771120 - 102013298 AGCD01058675;GBBH01203416;XR_001231069;XR_001231070;XR_001231071;XR_001231072;XR_001231073 MODEL 8773973 protein-coding LOC102012894 A-kinase anchor protein 17B-like NW_004955534 648006 696921 + 102012894 AGCD01070461;AGCD01070462;AGCD01070463;AGCD01070464;AGCD01070465;AGCD01070466;AGCD01070467;GBBH01217459;XM_005410447;XM_005410448 XP_005410504;XP_005410505 MODEL 8835404 protein-coding Creb3l2 cAMP responsive element binding protein 3 like 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cartilage development (ortholog); chondrocyte differentiation (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; FOUND IN chromatin (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) NW_004955494 5014509 5094220 + 102010914 AGCD01061517;GBCQ01154997;XM_013505001 XP_013360455 MODEL 8959937 ncrna LOC102012121 uncharacterized LOC102012121 NW_004955435 13285870 13323570 + 102012121 AGCD01033200;GBDF01292749;XR_001234893;XR_001234894;XR_261685 MODEL 8934545 pseudo LOC102003922 tubulin polyglutamylase TTLL4 pseudogene NW_004955585 115408 119336 - 102003922 AGCD01075993 MODEL 8822598 pseudo LOC102011274 translocation protein SEC62 pseudogene NW_004955453 11024593 11120561 + 102011274 AGCD01044797;AGCD01044798;AGCD01044799;AGCD01044800 MODEL 8943509 protein-coding Jtb jumping translocation breakpoint ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); mitotic cell cycle (ortholog); mitotic cytokinesis (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); midbody (ortholog) NW_004955545 569473 571725 - 102025944 AGCD01071800;GBCE01000109;XM_005411463 XP_005411520 MODEL 8893173 protein-coding Epcam epithelial cell adhesion molecule ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955441 14155084 14167584 + 102018032 AGCD01037179;AGCD01037180;AGCD01037181;AGCD01037182;GBCE01007173;GBCQ01011851;XM_013517611 XP_013373065 MODEL 8986535 protein-coding Clca2 chloride channel accessory 2 ENCODES a protein that exhibits chloride channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN chloride transport (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog) NW_004955423 7729032 7760340 - 102021778 AGCD01023611;GBCC01011126;XM_005385129 XP_005385186 MODEL 8800031 protein-coding Acod1 aconitate decarboxylase 1 ENCODES a protein that exhibits aconitate decarboxylase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cocaine (ortholog); cellular response to interferon-beta (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH esophageal carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); Invasive Breast Carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955404 30254934 30266898 - 102019764 AGCD01004002;GBDK01343918;XM_013516487;XM_013516490;XM_013516495;XM_013516501;XM_013516502;XM_013516504;XM_013516510;XM_013516514;XM_013516520 XP_013371941;XP_013371944;XP_013371949;XP_013371955;XP_013371956;XP_013371958;XP_013371964;XP_013371968;XP_013371974 MODEL 8948716 pseudo LOC102013663 zinc finger protein 14 pseudogene NW_004955567 1589726 1604507 - 102013663 AGCD01074484;XM_005413380 MODEL 8801332 ncrna LOC102014783 uncharacterized LOC102014783 NW_004955419 16639359 16671251 - 102014783 AGCD01020122;AGCD01020123;GBDF01057878;XR_260635 MODEL 9015682 ncrna LOC102010530 uncharacterized LOC102010530 NW_004955446 355157 517018 + 102010530 AGCD01039940;AGCD01039941;AGCD01039942;AGCD01039943;AGCD01039944;GBDF01235331;XR_001235683;XR_262362 MODEL 9008869 protein-coding LOC102015516 prothymosin alpha-like NW_004955416 16038061 16038444 - 102015516 AGCD01017348;XM_005381702 XP_005381759 MODEL 8792792 protein-coding Defb128 defensin beta 128 INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog) NW_004955597 64950 66692 - 102025530 AGCD01076536;GBDF01142541;XM_005414734 XP_005414791 MODEL 10320450 pseudo LOC106149994 AN1-type zinc finger protein 6 pseudogene NW_004955460 14141310 14146714 - 106149994 AGCD01048740 MODEL 8771529 protein-coding Grina glutamate ionotropic receptor NMDA type subunit associated protein 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955454 2657374 2660591 + 102019663 AGCD01045026;GBCE01029592;XM_005395836 XP_005395893 MODEL 8886949 protein-coding Etaa1 ETAA1 activator of ATR kinase ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2/M transition checkpoint (ortholog); positive regulation of protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN nuclear replication fork (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955424 17271690 17321276 - 102025480 AGCD01024759;GBDF01261344;XM_005385677;XM_005385678;XR_001234226;XR_001234227;XR_001234228;XR_001234229;XR_001234230;XR_001234231;XR_001234232;XR_001234233;XR_001234234;XR_001234235;XR_001234236;XR_001234237;XR_261075 XP_005385734;XP_005385735 MODEL 8963478 protein-coding LOC102016261 olfactory receptor 10T2-like NW_004955414 23540528 23541493 + 102016261 AGCD01015501;XM_005380519 XP_005380576 MODEL 8977173 ncrna LOC102021898 uncharacterized LOC102021898 NW_004955425 24681489 24694908 + 102021898 AGCD01025892;GBDF01146962;XR_001234305;XR_261168 MODEL 8780190 ncrna LOC102019369 uncharacterized LOC102019369 NW_004955463 5190976 5203856 + 102019369 AGCD01049634;AGCD01049635;AGCD01049636;AGCD01049637;GBDF01125889;XR_263149;XR_263150 MODEL 8888349 protein-coding Kctd10 potassium channel tetramerization domain containing 10 ENCODES a protein that exhibits identical protein binding (ortholog); Notch binding (ortholog); INVOLVED IN angiogenesis (ortholog); heart development (ortholog); negative regulation of Notch signaling pathway (ortholog); FOUND IN MKS complex (ortholog); nucleoplasm (ortholog) NW_004955455 9032697 9064827 + 102020527 AGCD01045914;GBDF01080288;XM_005396451;XM_005396452 XP_005396508;XP_005396509 MODEL 8972170 pseudo LOC102005734 deoxynucleotidyltransferase terminal-interacting protein 2 pseudogene NW_004955428 1136198 1138064 + 102005734 AGCD01027605 MODEL 8832187 pseudo LOC102008250 cytochrome c oxidase assembly protein COX16 homolog, mitochondrial pseudogene NW_004955434 4045849 4046615 - 102008250 AGCD01032154;XM_005388576;XM_005388577 MODEL 9013423 ncrna LOC102015905 uncharacterized LOC102015905 NW_004955402 15836454 15841598 + 102015905 AGCD01000465;GBDF01025169;XR_259054 MODEL 8883745 ncrna LOC102007891 uncharacterized LOC102007891 NW_004955417 4393900 4397203 + 102007891 AGCD01017946;GBDF01263566;XR_260459 MODEL 8737535 pseudo LOC102009774 calmodulin-A pseudogene NW_004955573 459943 467278 + 102009774 AGCD01074980 MODEL 9034068 protein-coding LOC102021170 ubiquitin-conjugating enzyme E2 D2-like NW_004955525 2253534 2254410 + 102021170 AGCD01069082;GBDK01156554;XM_005409734;XM_005409735 XP_005409791;XP_005409792 MODEL 8808425 protein-coding Eif4g2 eukaryotic translation initiation factor 4 gamma 2 ENCODES a protein that exhibits translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN heart development (ortholog); negative regulation of autophagy (ortholog); positive regulation of axon extension (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH hypertension (ortholog); liver benign neoplasm (ortholog); renovascular hypertension (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 26389125 26399916 - 102020796 AGCD01015642;AGCD01015643;XM_005380528 XP_005380585 MODEL 8902864 protein-coding LOC102008603 forkhead box protein L1 NW_004955460 8202937 8204916 + 102008603 AGCD01048513;GBDF01028920;XM_005397773 XP_005397830 MODEL 8714999 protein-coding Dtna dystrobrevin alpha ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphatase binding (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); congenital heart disease (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell projection (ortholog) NW_004955402 21414122 21676389 + 102026692 AGCD01000590;AGCD01000591;AGCD01000592;GBDJ01229810;XM_005372772;XM_005372773;XM_005372775;XM_005372778;XM_005372779;XM_005372780;XM_005372782;XM_005372783;XM_005372786;XM_005372788;XM_005372790;XM_013508451;XM_013508483;XM_013508554;XM_013508773;XM_013508872 XP_005372829;XP_005372830;XP_005372832;XP_005372835;XP_005372836;XP_005372837;XP_005372839;XP_005372840;XP_005372843;XP_005372845;XP_005372847;XP_013363905;XP_013363937;XP_013364008;XP_013364227;XP_013364326 MODEL 8957602 protein-coding LOC102024592 tubulin polymerization-promoting protein NW_004955504 341155 416050 - 102024592 AGCD01064817;AGCD01064818;AGCD01064819;GBBH01000645;XM_005407009;XM_005407010;XM_013505871;XM_013505872;XM_013505873;XM_013505874;XM_013505875;XM_013505876;XM_013505877;XM_013505878;XM_013505879;XM_013505880;XM_013505881;XM_013505882;XM_013505883;XM_013505884;XM_013505885;XM_013505886 XP_005407066;XP_005407067;XP_013361325;XP_013361326;XP_013361327;XP_013361328;XP_013361329;XP_013361330;XP_013361331;XP_013361332;XP_013361333;XP_013361334;XP_013361335;XP_013361336;XP_013361337;XP_013361338;XP_013361339;XP_013361340 MODEL 8844852 pseudo LOC102011738 TBC1 domain family member 31-like NW_004955407 28180371 28202117 - 102011738 AGCD01007576;AGCD01007577 MODEL 39131747 rrna 5S_rRNA 5S ribosomal RNA 8974647 protein-coding CUNH2orf80 chromosome unknown C2orf80 homolog NW_004955457 6940355 6961464 + 102007305 AGCD01046861;GBDJ01410635;XM_005396967;XM_005396968;XM_013520672 XP_005397024;XP_005397025;XP_013376126 MODEL 8875849 ncrna LOC102020392 uncharacterized LOC102020392 NW_004955447 1208190 1217812 + 102020392 AGCD01040499;AGCD01040500;GBDK01306325;XR_262403 MODEL 8856413 ncrna LOC102020760 uncharacterized LOC102020760 NW_004955407 39791493 39800659 - 102020760 AGCD01007837;GBBH01210358;XR_001231360 MODEL 9012635 pseudo LOC102014414 protein mago nashi homolog pseudogene NW_004955454 6712718 6713157 - 102014414 AGCD01045261 MODEL 8926808 ncrna LOC102013303 uncharacterized LOC102013303 NW_004955421 26314686 26333180 - 102013303 AGCD01022259;AGCD01022260;GBDF01281827;XR_001233836;XR_001233837;XR_260829 MODEL 8886161 pseudo LOC102010531 60S ribosomal protein L37 pseudogene NW_004955446 2571700 2571990 + 102010531 AGCD01039985 MODEL 8902306 protein-coding Ctif cap binding complex dependent translation initiation factor INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of translational initiation (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955402 33706824 33986476 + 102009780 AGCD01000842;AGCD01000843;AGCD01000844;GBDI01105779;XM_005372899;XM_005372901;XM_005372902;XM_013510556 XP_005372956;XP_005372958;XP_005372959;XP_013366010 MODEL 8765725 protein-coding LOC102012123 uncharacterized LOC102012123 NW_004955436 1773036 1779567 - 102012123 AGCD01033588;AGCD01033589;GBDF01021603;XM_013516581 XP_013372035 MODEL 8864402 protein-coding C1galt1c1l C1GALT1 specific chaperone 1 like NW_004955441 10846009 10847263 - 102024854 AGCD01037095;GBDI01279325;XM_005390923 XP_005390980 MODEL 9022418 protein-coding Abca3 ATP binding cassette subfamily A member 3 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); ATP hydrolysis activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN lung development (ortholog); phosphatidylcholine metabolic process (ortholog); phosphatidylglycerol metabolic process (ortholog); PARTICIPATES IN altered surfactant homeostasis pathway; surfactant homeostasis pathway; transport pathway; ASSOCIATED WITH carbamoyl phosphate synthetase I deficiency disease (ortholog); chromosome 22q11.2 deletion syndrome, distal (ortholog); Colorectal Neoplasms (ortholog); FOUND IN alveolar lamellar body (ortholog); alveolar lamellar body membrane (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955442 14933550 14989492 + 102023749 AGCD01037852;AGCD01037853;GBDK01020576;XM_005391428;XM_005391429 XP_005391485;XP_005391486 MODEL 8816373 protein-coding LOC102003924 uncharacterized LOC102003924 NW_004955402 38979252 38993934 + 102003924 AGCD01000974;GBDF01101946;NM_001371756;XM_005373171;XM_013522414 NP_001358685;XP_005373228;XP_013377868 VALIDATED 9066198 ncrna LOC102009007 uncharacterized LOC102009007 NW_004955404 50480603 50488989 + 102009007 AGCD01004531;GBDF01057260;XR_259345 MODEL 8993560 protein-coding Jun Jun proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon regeneration (ortholog); cellular response to anisomycin (ortholog); PARTICIPATES IN adenosine signaling pathway; endothelin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH Alcohol-Related Disorders (ortholog); angiosarcoma (ortholog); Asphyxia (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) NW_004955464 1107598 1110326 + 102016032 AGCD01049944;AGCD01049945;GBCB01000077;GBDI01073972;XM_005398485 XP_005398542 MODEL 8819723 protein-coding Fer1l5 fer-1 like family member 5 INVOLVED IN binding of sperm to zona pellucida (ortholog); membrane fusion involved in acrosome reaction (ortholog); myoblast fusion (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955470 4020421 4080729 + 102019685 AGCD01052714;AGCD01052715;AGCD01052716;AGCD01052717;GBDF01161468;XM_013522710;XM_013522712 XP_013378164;XP_013378166 MODEL 8712098 ncrna LOC102016629 uncharacterized LOC102016629 NW_004955517 1599049 1602884 - 102016629 AGCD01067601;XR_264544 MODEL 39131888 rrna 5S_rRNA 5S ribosomal RNA 8979413 protein-coding Kctd11 potassium channel tetramerization domain containing 11 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of neuroblast proliferation (ortholog); negative regulation of smoothened signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) NW_004955467 9564905 9567020 - 102017971 AGCD01051518;GBBH01025470;XM_005399508 XP_005399565 MODEL 8989267 protein-coding LOC102013665 vomeronasal type-1 receptor 4-like NW_004955569 770136 772991 - 102013665 AGCD01074614;XM_013509361 XP_013364815 MODEL 8824956 protein-coding Clcc1 chloride channel CLIC like 1 ENCODES a protein that exhibits chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN chloride transport (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa 32 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955435 12387575 12408801 - 102021039 AGCD01033147;GBDK01016230;XM_005388837;XM_005388838;XM_005388839;XM_013516519;XM_013516521 XP_005388894;XP_005388895;XP_005388896;XP_013371973;XP_013371975 MODEL 8765147 ncrna LOC102017793 uncharacterized LOC102017793 NW_004955499 5632515 5635424 - 102017793 AGCD01063523;GBCQ01045824;XR_264219 MODEL 8904815 protein-coding Inca1 inhibitor of CDK, cyclin A1 interacting protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); positive regulation of apoptotic signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955467 10391957 10397212 - 102025339 AGCD01051562;GBCB01087285;GBDJ01290751;XM_013522077 XP_013377531 MODEL 8857278 protein-coding Acot11 acyl-CoA thioesterase 11 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); response to cold (ortholog); response to temperature stimulus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) NW_004955464 4741504 4782383 - 102028066 AGCD01049994;GBBH01110409;XM_005398521;XM_005398524;XM_013521712;XM_013521713 XP_005398578;XP_005398581;XP_013377166;XP_013377167 MODEL 9046023 pseudo LOC102012900 probable G-protein coupled receptor 160 NW_004955440 2492344 2496582 - 102012900 AGCD01036208 MODEL 8738553 ncrna LOC102014784 uncharacterized LOC102014784 NW_004955419 25764769 25771898 + 102014784 AGCD01020392;GBDF01178687;XR_260657 MODEL 8749312 protein-coding Ano9 anoctamin 9 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); chloride channel inhibitor activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955476 11588043 11603027 + 102023258 AGCD01055466;GBBH01197736;XM_005401864 XP_005401921 MODEL 8709668 protein-coding Ighmbp2 immunoglobulin mu DNA binding protein 2 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-3' RNA helicase activity (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuromuscular process (ortholog); spinal cord motor neuron differentiation (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); autosomal dominant distal hereditary motor neuronopathy (ortholog); autosomal dominant distal hereditary motor neuronopathy 1 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 17017855 17047724 - 102028646 AGCD01022906;AGCD01022907;AGCD01022908;GBDF01154386;XM_005384263 XP_005384320 MODEL 8871740 protein-coding Eif4g3 eukaryotic translation initiation factor 4 gamma 3 ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); positive regulation of meiosis I (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH heparin cofactor II deficiency (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); synapse (ortholog) NW_004955452 1328103 1625341 - 102024417 AGCD01043846;AGCD01043847;AGCD01043848;AGCD01043849;AGCD01043850;AGCD01043851;AGCD01043852;AGCD01043853;GBCE01118471;GBDK01197105;XM_013519508;XM_013519509;XM_013519510;XM_013519511;XM_013519512;XM_013519513;XM_013519514;XM_013519515 XP_013374962;XP_013374963;XP_013374964;XP_013374965;XP_013374966;XP_013374967;XP_013374968;XP_013374969 MODEL 8822143 ncrna LOC102021899 uncharacterized LOC102021899 NW_004955426 18018072 18050051 + 102021899 AGCD01026509;AGCD01026510;GBDF01014473;XR_261200 MODEL 8802783 pseudo LOC102005735 L-lactate dehydrogenase A-like 6B NW_004955507 6103959 6105265 - 102005735 AGCD01065696 MODEL 8939052 protein-coding Grip1 glutamate receptor interacting protein 1 ENCODES a protein that exhibits GTPase binding (ortholog); ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to glycine (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH clubfoot (ortholog); Fraser syndrome (ortholog); Fraser syndrome 1 (ortholog); FOUND IN dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) NW_004955458 12970858 13179369 - 102024765 AGCD01047794;AGCD01047795;AGCD01047796;GBDK01434190;XM_005397454;XM_005397455;XM_005397458 XP_005397511;XP_005397512;XP_005397515 MODEL 39134226 misc_rna 7SK 7SK RNA 8977924 ncrna LOC102021171 uncharacterized LOC102021171 NW_004955436 4367993 4378045 - 102021171 AGCD01033661;GBCE01069603;XR_261754 MODEL 8859400 protein-coding LOC102012132 keratin, type II cytoskeletal 72 NW_004955547 2991156 3005189 - 102012132 AGCD01072303;XM_005411950 XP_005412007 MODEL 8815011 pseudo LOC102009380 40S ribosomal protein S8 pseudogene NW_004955415 27385133 27385744 + 102009380 AGCD01016630 MODEL 8816755 pseudo LOC102015517 60S ribosomal protein L17 pseudogene NW_004955417 26639628 26640154 - 102015517 AGCD01018514 MODEL 8871813 ncrna LOC102024593 uncharacterized LOC102024593 NW_004955427 12460417 12476643 - 102024593 AGCD01027214;AGCD01027215;GBDF01222863;XR_001234408;XR_001234409 MODEL 8860435 protein-coding Defb129 defensin beta 129 NW_004955597 116468 119192 + 102025861 AGCD01076541;XM_005414735 XP_005414792 MODEL 8839928 pseudo LOC102011280 probable methyltransferase-like protein 15 NW_004955457 7384810 7385987 - 102011280 AGCD01046877 MODEL 8797777 protein-coding Htr5a 5-hydroxytryptamine receptor 5A ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); ASSOCIATED WITH autistic disorder (ortholog); intracranial hypertension (ortholog); prostate cancer (ortholog); FOUND IN dendrite (ortholog); perikaryon (ortholog); plasma membrane (ortholog) NW_004955491 8258032 8266503 + 102017028 AGCD01060611;XM_005404860 XP_005404917 MODEL 9065199 pseudo LOC102019372 trifunctional enzyme subunit alpha, mitochondrial pseudogene NW_004955411 23447126 23462571 - 102019372 AGCD01012108 MODEL 8817269 pseudo LOC102008251 60S ribosomal protein L17 pseudogene NW_004955523 12998 13552 + 102008251 AGCD01068430 MODEL 8805836 ncrna LOC102014415 uncharacterized LOC102014415 NW_004955454 15816774 15822601 + 102014415 AGCD01045496;GBDF01013643;XR_262797 MODEL 8928099 protein-coding Epcip exosomal polycystin 1 interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitocytosis (ortholog); FOUND IN extracellular exosome (ortholog); migrasome (ortholog) NW_004955407 32229108 32249097 - 102017952 AGCD01007671;GBDJ01114206;XM_005375674 XP_005375731 MODEL 9025291 protein-coding LOC102014016 olfactory receptor 6C1 NW_004955458 2523219 2524157 - 102014016 AGCD01047237;XM_005397243 XP_005397300 MODEL 8917553 pseudo LOC102015906 general transcription factor IIF subunit 2 pseudogene NW_004955402 44325761 44326706 + 102015906 AGCD01001109;XM_005373007 MODEL 8982705 protein-coding Etf1 eukaryotic translation termination factor 1 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); sequence-specific mRNA binding (ortholog); translation release factor activity (ortholog); INVOLVED IN protein methylation (ortholog); regulation of translational termination (ortholog); translational termination (ortholog); PARTICIPATES IN translation termination pathway; FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); nucleus (ortholog) NW_004955418 1943233 1974241 + 102025793 AGCD01018735;GBDF01005274;XM_005382097;XM_005382099;XM_013512964 XP_005382154;XP_005382156;XP_013368418 MODEL 8760463 ncrna LOC102007892 uncharacterized LOC102007892 NW_004955417 12654544 12663569 - 102007892 AGCD01018162;GBDF01040430;XR_001233450;XR_260476 MODEL 9064356 pseudo LOC102008604 calcyclin-binding protein pseudogene NW_004955460 11101580 11102535 - 102008604 AGCD01048629;XR_263056 MODEL 8852225 protein-coding Abca4 ATP binding cassette subfamily A member 4 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); all-trans retinal binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN phospholipid transfer to membrane (ortholog); phospholipid translocation (ortholog); photoreceptor cell maintenance (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH age related macular degeneration (ortholog); age related macular degeneration 14 (ortholog); age related macular degeneration 2 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); photoreceptor outer segment (ortholog) NW_004955423 612098 738702 + 102010915 AGCD01023416;AGCD01023417;GBDJ01166590;XM_005385003 XP_005385060 MODEL 8747232 protein-coding Dcaf16 DDB1 and CUL4 associated factor 16 FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955480 6437329 6438797 + 102023910 AGCD01056684;GBDK01429530;XM_005402545 XP_005402602 MODEL 39131748 rrna 5S_rRNA 5S ribosomal RNA 8966681 protein-coding Dlec1 DLEC1 cilia and flagella associated protein ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955421 4889860 4957787 + 102013511 AGCD01021704;AGCD01021705;AGCD01021706;AGCD01021707;GBDF01153178;XM_005383726 XP_005383783 MODEL 39131890 rrna 5S_rRNA 5S ribosomal RNA 10381713 pseudo LOC106149995 ubiquitin carboxyl-terminal hydrolase 42 pseudogene NW_004955460 9938049 9942676 - 106149995 AGCD01048564 MODEL 8866399 protein-coding CUNH3orf18 chromosome unknown C3orf18 homolog NW_004955532 2339628 2349324 - 102013757 AGCD01070224;GBCB01111799;XM_005410302;XM_005410303 XP_005410359;XP_005410360 MODEL 9027005 pseudo LOC102020397 DNA-directed RNA polymerases I, II, and III subunit RPABC4 pseudogene NW_004955448 6798525 6799244 + 102020397 AGCD01041393;XM_005393159 MODEL 8842634 protein-coding Kctd12 potassium channel tetramerization domain containing 12 ENCODES a protein that exhibits identical protein binding (ortholog); obsolete G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential (ortholog); obsolete G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic membrane (ortholog); presynaptic active zone membrane (ortholog) NW_004955404 30325019 30330953 + 102020078 AGCD01004003;GBBH01119634;GBCE01030852;XM_005374166 XP_005374223 MODEL 8723544 pseudo LOC102016269 tigger transposable element-derived protein 1-like NW_004955417 13872785 13876028 + 102016269 AGCD01018191 MODEL 39133957 misc_rna 7SK 7SK RNA 8974798 pseudo LOC102014791 tubulin alpha-1B chain-like NW_004955491 7039771 7041513 - 102014791 AGCD01060588 MODEL 8833038 protein-coding LOC102012901 general transcription factor 3C polypeptide 6-like NW_004955441 6322077 6323436 - 102012901 AGCD01036912;XM_013517515 XP_013372969 MODEL 8712247 protein-coding LOC102021172 SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like NW_004955437 1350477 1355574 + 102021172 AGCD01034204;GBDJ01016936;XM_005389453 XP_005389510 MODEL 9066213 ncrna LOC102010532 uncharacterized LOC102010532 NW_004955447 16858642 16860472 - 102010532 AGCD01041110;GBDF01286927;XR_001235700 MODEL 8900487 protein-coding Anos1 anosmin 1 ASSOCIATED WITH amenorrhea (ortholog); Delayed Puberty (ortholog); genetic disease (ortholog) NW_004955499 6486287 6686739 - 102026654 AGCD01063547;AGCD01063548;AGCD01063549;AGCD01063550;AGCD01063551;AGCD01063552;AGCD01063553;AGCD01063554;GBCE01028302;GBDI01025617;XM_013505608 XP_013361062 MODEL 8806604 protein-coding Acot12 acyl-CoA thioesterase 12 ENCODES a protein that exhibits acetyl-CoA hydrolase activity (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); acyl-CoA metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH liver cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955418 28829316 28872629 + 102012861 AGCD01019445;GBCQ01154601;XM_005382310 XP_005382367 MODEL 9042426 ncrna LOC102009778 uncharacterized LOC102009778 NW_004955402 5585104 5592598 - 102009778 AGCD01000137;GBDF01225737;XR_259030 MODEL 8771723 protein-coding Kctd13 potassium channel tetramerization domain containing 13 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of Rho protein signal transduction (ortholog); neural precursor cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); spondylocostal dysostosis 5 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955493 7039027 7055798 + 102006471 AGCD01061154;GBDF01049205;XM_005405231 XP_005405288 MODEL 10291915 protein-coding Defb134 defensin beta 134 ASSOCIATED WITH thoracic aortic aneurysm (ortholog) NW_004955403 53215271 53221539 - 106148664 AGCD01003043;AGCD01003044;AGCD01003045;XM_013514937 XP_013370391 MODEL 9063969 protein-coding Eif4h eukaryotic translation initiation factor 4H INVOLVED IN developmental growth (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Williams-Beuren syndrome (ortholog) NW_004955456 13699012 13710065 - 102019472 AGCD01046612;GBCB01007540;XM_013520517 XP_013375971 MODEL 8946286 protein-coding Fer1l6 fer-1 like family member 6 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); INVOLVED IN response to bacterium (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); recycling endosome (ortholog) NW_004955540 2686227 2834877 + 102006282 AGCD01071324;GBBH01143568;XM_013507931;XM_013507932;XM_013507933;XM_013507934;XM_013507935;XM_013507936 XP_013363385;XP_013363386;XP_013363387;XP_013363388;XP_013363389;XP_013363390 MODEL 8990059 protein-coding Creb3l3 cAMP responsive element binding protein 3 like 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); response to endoplasmic reticulum stress (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH HYPERTRIGLYCERIDEMIA 1 (ortholog); HYPERTRIGLYCERIDEMIA 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); nucleus (ortholog) NW_004955495 4651086 4670852 - 102013515 AGCD01061938;AGCD01061939;AGCD01061940;GBDF01196211;XM_005405812;XM_005405813 XP_005405869;XP_005405870 MODEL 8723231 protein-coding LOC102005737 olfactory receptor 8J3-like NW_004955511 1491665 1492606 + 102005737 AGCD01066369;XM_005407963 XP_005408020 MODEL 8958561 pseudo LOC102013666 transmembrane 9 superfamily member 3-like NW_004955581 227506 229739 + 102013666 AGCD01075662 MODEL 8876439 protein-coding LOC102008252 cartilage oligomeric matrix protein NW_004955524 2879519 2884305 + 102008252 AGCD01068843;GBDI01053407;GBDK01101224;XM_013507182 XP_013362636 MODEL 8877031 protein-coding Grip2 glutamate receptor interacting protein 2 ENCODES a protein that exhibits glutamate receptor binding (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); neurotransmitter receptor transport, endosome to postsynaptic membrane (ortholog); Notch signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); dendritic shaft (ortholog) NW_004955429 17132520 17177547 - 102006936 AGCD01028846;GBDJ01115039;XM_005387067;XM_013515423;XM_013515424;XM_013515425;XM_013515426;XM_013515427;XM_013515428 XP_005387124;XP_013370877;XP_013370878;XP_013370879;XP_013370880;XP_013370881;XP_013370882 MODEL 8887376 protein-coding Clcf1 cardiotrophin like cytokine factor 1 ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cell surface receptor signaling pathway (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH cold-induced sweating syndrome (ortholog); cold-induced sweating syndrome 2 (ortholog); COVID-19 (ortholog); FOUND IN CNTFR-CLCF1 complex (ortholog); CRLF-CLCF1 complex (ortholog); extracellular region (ortholog) NW_004955422 18097779 18108628 + 102020812 AGCD01022937;GBDJ01016548;XM_005384338;XM_005384339 XP_005384395;XP_005384396 MODEL 8775747 pseudo LOC102013305 calcyclin-binding protein pseudogene NW_004955492 8003860 8004552 + 102013305 AGCD01060807 MODEL 8906025 ncrna LOC102020761 uncharacterized LOC102020761 NW_004955456 13807823 13809621 + 102020761 AGCD01046623;GBBH01012197;XR_262897 MODEL 8817877 protein-coding Incenp inner centromere protein ENCODES a protein that exhibits molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); melanoma (ortholog); nephronophthisis (ortholog); FOUND IN central element (ortholog); chromocenter (ortholog); chromosome, centromeric region (ortholog) NW_004955511 5705948 5724167 - 102006057 AGCD01066576;AGCD01066577;GBBH01050425;XM_005408127;XM_005408128 XP_005408184;XP_005408185 MODEL 8805134 protein-coding LOC102015519 olfactory receptor 2T8-like NW_004955418 30549727 30550668 + 102015519 AGCD01019528;XM_005382378 XP_005382435 MODEL 8777636 protein-coding LOC102012139 gonadotropin-releasing hormone receptor NW_004955447 5179231 5190335 + 102012139 AGCD01040748;XM_005392835;XM_005392836 XP_005392892;XP_005392893 MODEL 39131303 protein-coding C1orf56 chromosome 1 open reading frame 56 8876659 protein-coding LOC102016277 ubiquitin carboxyl-terminal hydrolase 17-like protein 6 NW_004955487 138278 141472 - 102016277 AGCD01059208;XM_013504334 XP_013359788 MODEL 8704333 ncrna LOC102011284 uncharacterized LOC102011284 NW_004955460 12592756 12593305 - 102011284 AGCD01048661;GBDF01041740;XR_263061 MODEL 8910487 protein-coding LOC102011741 olfactory receptor 12-like NW_004955458 2309459 2310406 + 102011741 AGCD01047223;XM_005397238 XP_005397295 MODEL 8803627 protein-coding LOC102014418 whey acidic protein-like NW_004955456 7190493 7192491 + 102014418 AGCD01046395;GBDJ01124679;XM_005396646 XP_005396703 MODEL 8736565 pseudo LOC102017795 5-azacytidine-induced protein 2 pseudogene NW_004955503 1186824 1187899 + 102017795 AGCD01064558 MODEL 8819380 protein-coding Dtnb dystrobrevin beta ENCODES a protein that exhibits DNA binding (ortholog); phosphatase binding (ortholog); INVOLVED IN neuron differentiation (ortholog); FOUND IN cytoplasm (ortholog); GABA-ergic synapse (ortholog); inhibitory synapse (ortholog) NW_004955469 7402777 7771767 - 102007104 AGCD01052415;AGCD01052416;AGCD01052417;AGCD01052418;AGCD01052419;AGCD01052420;AGCD01052421;AGCD01052422;AGCD01052423;AGCD01052424;AGCD01052425;AGCD01052426;AGCD01052427;AGCD01052428;AGCD01052429;AGCD01052430;AGCD01052431;AGCD01052432;GBDK01182459;XM_013522576;XM_013522577;XM_013522578;XM_013522579;XM_013522580;XM_013522581;XM_013522582;XM_013522583;XM_013522584;XM_013522585;XM_013522586;XM_013522587;XM_013522588;XM_013522589;XM_013522590;XM_013522591;XM_013522592;XM_013522593;XM_013522594;XM_013522595 XP_013378030;XP_013378031;XP_013378032;XP_013378033;XP_013378034;XP_013378035;XP_013378036;XP_013378037;XP_013378038;XP_013378039;XP_013378040;XP_013378041;XP_013378042;XP_013378043;XP_013378044;XP_013378045;XP_013378046;XP_013378047;XP_013378048;XP_013378049 MODEL 8825130 protein-coding Epdr1 ependymin related 1 ENCODES a protein that exhibits ganglioside GM1 binding (ortholog); identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN myofibroblast contraction (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) NW_004955460 5612589 5650222 - 102025881 AGCD01048455;AGCD01048456;GBDJ01134723;XM_005397745;XM_005397746 XP_005397802;XP_005397803 MODEL 8959910 protein-coding Acot13 acyl-CoA thioesterase 13 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); protein homotetramerization (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955483 2360758 2375071 - 102010264 AGCD01057675;GBCQ01010402;XM_005403366 XP_005403423 MODEL 8796694 protein-coding LOC102009384 galectin-5-like NW_004955481 5414837 5422402 - 102009384 AGCD01056977;GBBH01036969;XM_013503347 XP_013358801 MODEL 39131749 rrna 5S_rRNA 5S ribosomal RNA 8758607 pseudo LOC102024594 kinesin-associated protein 3 pseudogene NW_004955427 21459739 21461843 - 102024594 AGCD01027445 MODEL 8795868 protein-coding Ctla4 cytotoxic T-lymphocyte associated protein 4 ENCODES a protein that exhibits receptor decoy activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); DNA damage response (ortholog); negative regulation of B cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); alcohol-associated liver disease (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955457 11028707 11034898 - 102021631 AGCD01046961;GBDI01208688;XM_005397012;XM_005397013;XM_005397014 XP_005397069;XP_005397070;XP_005397071 MODEL 8974777 protein-coding Igip IgA inducing protein NW_004955418 527380 536136 - 102013172 AGCD01018679;GBDI01291441;XM_013512930 XP_013368384 MODEL 8742095 ncrna LOC102009009 uncharacterized LOC102009009 NW_004955452 14645767 14677079 + 102009009 AGCD01044474;AGCD01044475;AGCD01044476;GBDF01115467;XR_001236027 MODEL 9027483 protein-coding LOC102019383 olfactory receptor 51S1 NW_004955414 20464355 20465326 - 102019383 AGCD01015375;XM_005380058 XP_005380115 MODEL 8919157 ncrna LOC102021174 uncharacterized LOC102021174 NW_004955437 6016459 6023729 + 102021174 AGCD01034413;GBDF01226129;XR_001235072;XR_001235073 MODEL 8852882 ncrna LOC102016632 uncharacterized LOC102016632 NW_004955527 3258510 3261122 - 102016632 AGCD01069482;GBDF01207466;XR_001231972 MODEL 8947774 protein-coding Junb JunB proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to hormone stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH anaplastic large cell lymphoma (ortholog); colon cancer (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor AP-1 complex (ortholog) NW_004955415 31876508 31878289 + 102021965 AGCD01016700;GBBH01061809;XM_005381028 XP_005381085 MODEL 8937592 protein-coding LOC102014024 glutathione S-transferase A4-like NW_004955411 3100067 3123039 + 102014024 AGCD01011538;GBCB01001165;XM_005377614;XM_005377615;XM_013510922;XM_013510923 XP_005377671;XP_005377672;XP_013366376;XP_013366377 MODEL 39134227 misc_rna 7SK 7SK RNA 8892951 ncrna LOC102007893 uncharacterized LOC102007893 NW_004955417 25416076 25425950 - 102007893 AGCD01018480;GBDF01236896;XR_260494 MODEL 9018182 protein-coding Anp32a acidic nuclear phosphoprotein 32 family member A ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); INVOLVED IN negative regulation of plasma membrane bounded cell projection assembly (ortholog); negative regulation of protein modification process (ortholog); nucleocytoplasmic transport (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Animal Disease Models (ortholog); Brain Injuries (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 7449368 7484524 + 102018788 AGCD01042538;GBDJ01127727;XM_005393670;XM_005393671 XP_005393727;XP_005393728 MODEL 8981152 protein-coding Abca5 ATP binding cassette subfamily A member 5 INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN transport pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Generalized Hypertrichosis Terminalis, with or without Gingival Hyperplasia (ortholog); genetic disease (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog) NW_004955478 3526376 3586811 + 102023149 AGCD01055825;AGCD01055826;AGCD01055827;GBCE01049814;GBCE01049815;XM_013503232 XP_013358686 MODEL 8782842 ncrna LOC102011744 uncharacterized LOC102011744 NW_004955459 4423019 4424874 - 102011744 AGCD01048026;GBDF01144191;XR_263015 MODEL 8948397 ncrna LOC102020398 uncharacterized LOC102020398 NW_004955402 19310308 19321050 - 102020398 AGCD01000558;AGCD01000559;GBDF01182124;XR_259056 MODEL 9067512 ncrna LOC102013667 uncharacterized LOC102013667 NW_004955583 509021 511236 - 102013667 AGCD01075831;GBDK01419162;XR_001232499;XR_265094 MODEL 8777568 protein-coding CUNH3orf20 chromosome unknown C3orf20 homolog FOUND IN cytoplasm (ortholog) NW_004955429 17222834 17271320 + 102007256 AGCD01028848;AGCD01028849;GBDF01002418;XM_005387068;XM_005387069;XM_005387071 XP_005387125;XP_005387126;XP_005387128 MODEL 8756018 protein-coding LOC102003925 protein FAM127A NW_004955602 174103 174639 - 102003925 AGCD01076766;GBCB01040403;XM_005414829 XP_005414886 MODEL 8707225 pseudo LOC102012902 E3 ubiquitin-protein ligase RNF13-like NW_004955550 44557 45787 + 102012902 AGCD01072481 MODEL 9007086 protein-coding LOC102014800 probable N-acetyltransferase CML1 NW_004955424 12072755 12097350 - 102014800 AGCD01024595;GBCQ01035853;XM_005385558;XM_013514662 XP_005385615;XP_013370116 MODEL 8799943 protein-coding Htr6 5-hydroxytryptamine receptor 6 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); cerebral cortex cell migration (ortholog); G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH Alzheimer's disease (ortholog); amphetamine abuse (ortholog); Memory Disorders (ortholog); FOUND IN cilium (ortholog); dendrite (ortholog); plasma membrane (ortholog) NW_004955452 323641 338312 + 102013466 AGCD01043808;GBCE01082577;XM_005394663 XP_005394720 MODEL 8745775 protein-coding LOC102021900 transmembrane protein 45A-like NW_004955427 2000281 2046098 + 102021900 AGCD01026887;AGCD01026888;AGCD01026889;GBCC01000449;XM_005386297 XP_005386354 MODEL 8708515 protein-coding LOC102015521 histone H3.1 NW_004955483 786482 786943 + 102015521 AGCD01057630;XM_005403292 XP_005403349 MODEL 8949400 protein-coding LOC102013310 regenerating islet-derived protein 3-beta-like NW_004955424 7346797 7348894 + 102013310 AGCD01024435;GBDF01033597;XM_005385457;XM_005385458 XP_005385514;XP_005385515 MODEL 8711925 pseudo LOC102010533 olfactory receptor 2B6-like NW_004955576 1225109 1226068 - 102010533 AGCD01075364;XM_005413950 MODEL 10128260 protein-coding Kctd14 potassium channel tetramerization domain containing 14 NW_004955414 13921233 13921851 + 106147990 AGCD01015130;GBDJ01197096;XM_013511712 XP_013367166 MODEL 8721786 pseudo LOC102011286 mitochondrial import inner membrane translocase subunit Tim9 pseudogene NW_004955410 11964895 11965083 - 102011286 AGCD01010838 MODEL 9051685 protein-coding Ferd3l Fer3 like bHLH transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); floor plate development (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) NW_004955410 22034413 22034978 - 102028167 AGCD01011068;XM_005377355 XP_005377412 MODEL 8961424 protein-coding Etfa electron transfer flavoprotein subunit alpha ENCODES a protein that exhibits electron transfer activity (ortholog); flavin adenine dinucleotide binding (ortholog); oxidoreductase activity (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH genetic disease (ortholog); glutaric acidemia type 3 (ortholog); Glutaric Aciduria 2 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955450 1392526 1451591 - 102017080 AGCD01042364;GBDF01121130;XM_005393471 XP_005393528 MODEL 8795949 protein-coding Dleu7 deleted in lymphocytic leukemia 7 NW_004955431 4205391 4220305 - 102029215 AGCD01029989;XM_005387603 XP_005387660 MODEL 8770277 protein-coding Eif5 eukaryotic translation initiation factor 5 ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); formation of translation preinitiation complex (ortholog); regulation of translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955538 2226493 2233275 + 102008982 AGCD01071110;GBDF01008662;XM_005410773 XP_005410830 MODEL 8755787 protein-coding Creb3l4 cAMP responsive element binding protein 3 like 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Neoplasm Recurrence, Local (ortholog); prostate adenocarcinoma (ortholog); prostate carcinoma in situ (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955545 563710 569224 + 102024951 AGCD01071800;GBDF01148127;XM_005411459;XM_005411460;XM_005411461;XM_005411462 XP_005411516;XP_005411517;XP_005411518;XP_005411519 MODEL 8745459 protein-coding LOC102005739 olfactory receptor 5L1-like NW_004955511 649905 655429 + 102005739 AGCD01066337;XM_013506360 XP_013361814 MODEL 8811387 protein-coding LOC102017797 uncharacterized LOC102017797 NW_004955427 10150908 10170576 - 102017797 AGCD01027128;AGCD01027129;AGCD01027130;AGCD01027131;AGCD01027132;AGCD01027133;GBDF01207976;XM_013515052 XP_013370506 MODEL 39131891 rrna 5S_rRNA 5S ribosomal RNA 10274622 protein-coding LOC106149996 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 9943924 10051409 - 106149996 AGCD01048564;AGCD01048565;AGCD01048566;AGCD01048567;AGCD01048568;AGCD01048569;GBDF01277242;XM_013521137;XM_013521138 XP_013376591;XP_013376592 MODEL 8999857 protein-coding Clcn1 chloride voltage-gated channel 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); chloride transport (ortholog); muscle contraction (ortholog); ASSOCIATED WITH Becker disease (ortholog); cerebral palsy (ortholog); Charcot-Marie-Tooth disease intermediate type (ortholog); FOUND IN plasma membrane (ortholog); sarcolemma (ortholog) NW_004955494 318137 349568 - 102024581 AGCD01061376;GBCB01002166;XM_005405361 XP_005405418 MODEL 8829320 protein-coding Epg5 ectopic P-granules 5 autophagy tethering factor INVOLVED IN anatomical structure homeostasis (ortholog); apoptotic process (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); cardiomyopathy (ortholog); Developmental Disabilities (ortholog); FOUND IN lysosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955402 31422848 31532189 - 102025742 AGCD01000788;AGCD01000789;AGCD01000790;GBDF01280540;XM_005372862;XM_013510404 XP_005372919;XP_013365858 MODEL 8808177 protein-coding LOC102012140 olfactory receptor 2G3-like NW_004955576 1369561 1370502 - 102012140 AGCD01075374;XM_005413955 XP_005414012 MODEL 8763367 protein-coding Gripap1 GRIP1 associated protein 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN negative regulation of protein localization (ortholog); negative regulation of receptor clustering (ortholog); regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane (ortholog); ASSOCIATED WITH epilepsy (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN dendrite (ortholog); extrinsic component of postsynaptic early endosome membrane (ortholog); glutamatergic synapse (ortholog) NW_004955543 500340 527243 - 102029795 AGCD01071587;GBBH01163812;XM_005411297;XM_005411298;XM_005411300;XM_005411301;XM_005411302;XM_013508155;XM_013508156 XP_005411354;XP_005411355;XP_005411357;XP_005411358;XP_005411359;XP_013363609;XP_013363610 MODEL 8790802 protein-coding Abca6 ATP binding cassette subfamily A member 6 ASSOCIATED WITH allergic contact dermatitis (ortholog); Colorectal Neoplasms (ortholog); FOUND IN Golgi membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955478 3639817 3706115 + 102023693 AGCD01055828;AGCD01055829;AGCD01055830;GBCE01081913;XM_005402108;XM_005402109;XM_005402110 XP_005402165;XP_005402166;XP_005402167 MODEL 8909774 protein-coding LOC102015907 late cornified envelope protein 3A-like NW_004955592 806985 807294 + 102015907 AGCD01076324;XM_013509982 XP_013365436 MODEL 8954947 protein-coding Inf2 inverted formin 2 INVOLVED IN actin nucleation (ortholog); gene expression (ortholog); regulation of cellular component size (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease dominant intermediate E (ortholog); Charcot-Marie-Tooth Disease Type 6B (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955538 3154670 3176510 + 102025725 AGCD01071151;AGCD01071152;GBDK01240114;XM_005410836;XM_005410837;XM_005410838 XP_005410893;XP_005410894;XP_005410895 MODEL 8793967 ncrna LOC102009015 uncharacterized LOC102009015 NW_004955407 17180370 17193372 + 102009015 AGCD01007241;XR_259563 MODEL 8757519 ncrna LOC102016279 uncharacterized LOC102016279 NW_004955422 11711943 11726590 - 102016279 AGCD01022765;GBDF01180653;XR_260867 MODEL 9017677 protein-coding C1qa complement C1q A chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN astrocyte activation (ortholog); complement activation, classical pathway (ortholog); complement-mediated synapse pruning (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Brain Injuries (ortholog); C1q Deficiency (ortholog); FOUND IN complement component C1 complex (ortholog); complement component C1q complex (ortholog); extracellular region (ortholog) NW_004955452 2753362 2756220 + 102012920 AGCD01043903;GBDK01006456;XM_013519754 XP_013375208 MODEL 10104730 protein-coding Defb135 defensin beta 135 ASSOCIATED WITH thoracic aortic aneurysm (ortholog) NW_004955403 53199675 53211089 + 106148662 AGCD01003043;GBDF01267137;XM_013514932 XP_013370386 MODEL 8866421 protein-coding LOC102014423 olfactory receptor 12-like NW_004955458 2199187 2200134 - 102014423 AGCD01047216;XM_005397492 XP_005397549 MODEL 9055287 protein-coding Dcaf17 DDB1 and CUL4 associated factor 17 INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodegeneration with brain iron accumulation (ortholog); Woodhouse-Sakati syndrome (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) NW_004955449 3428311 3458723 - 102020503 AGCD01041851;GBCE01092377;XM_005393236;XM_005393237;XM_005393239;XM_013518768;XM_013518769 XP_005393293;XP_005393294;XP_005393296;XP_013374222;XP_013374223 MODEL 9033919 ncrna LOC102014025 uncharacterized LOC102014025 NW_004955411 11085430 11090350 + 102014025 AGCD01011803;GBDF01237810;XR_001232812;XR_001232813;XR_001232814 MODEL 8945258 protein-coding Clcn2 chloride voltage-gated channel 2 ENCODES a protein that exhibits chloride channel regulator activity (ortholog); voltage-gated chloride channel activity (ortholog); voltage-gated monoatomic anion channel activity (ortholog); INVOLVED IN cell differentiation involved in salivary gland development (ortholog); cellular hypotonic response (ortholog); chloride transport (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); cerebral palsy (ortholog); cystic fibrosis (ortholog); FOUND IN astrocyte end-foot (ortholog); axon initial segment (ortholog); basolateral plasma membrane (ortholog) NW_004955420 23138558 23152462 + 102019067 AGCD01021229;GBDF01160744;XM_005383315;XM_005383317;XM_005383319 XP_005383372;XP_005383374;XP_005383376 MODEL 8970554 protein-coding Dtnbp1 dystrobrevin binding protein 1 INVOLVED IN actin cytoskeleton organization (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH disease of mental health (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN axon (ortholog); BLOC-1 complex (ortholog); clathrin-sculpted vesicle (ortholog) NW_004955590 276143 382812 + 102025745 AGCD01076199;AGCD01076200;AGCD01076201;AGCD01076202;GBCQ01103688;XM_013509961;XM_013509962 XP_013365415;XP_013365416 MODEL 8947152 ncrna LOC102016633 uncharacterized LOC102016633 NW_004955436 2623902 2634426 + 102016633 AGCD01033611;GBDF01178321;XR_001234941;XR_261749 MODEL 8863543 ncrna LOC102024595 uncharacterized LOC102024595 NW_004955428 4794656 4795986 - 102024595 AGCD01027700;GBDF01264382;XR_261295 MODEL 39131371 protein-coding ACOT6 acyl-CoA thioesterase 6 9017153 pseudo LOC102009783 60S ribosomal protein L23a pseudogene NW_004955402 42724840 42797870 + 102009783 AGCD01001045;AGCD01001046;AGCD01001047;AGCD01001048;AGCD01001049;XR_259084 MODEL 8943653 ncrna LOC102008606 uncharacterized LOC102008606 NW_004955410 29146901 29160996 - 102008606 AGCD01011276;GBDF01148292;XR_001232701;XR_001232702 MODEL 9020774 protein-coding Iglon5 IgLON family member 5 INVOLVED IN motor behavior (ortholog); neuromuscular process controlling balance (ortholog) NW_004955558 1059263 1066616 - 102013976 AGCD01073413;GBCE01131499;GBDK01125776;XM_013508838 XP_013364292 MODEL 8871668 ncrna LOC102021181 uncharacterized LOC102021181 NW_004955561 1723855 1736998 + 102021181 AGCD01073864;GBDF01047777;XR_001232357 MODEL 8941545 ncrna LOC102008254 uncharacterized LOC102008254 NW_004955436 16825530 16828910 + 102008254 AGCD01033933;GBDF01144258;XR_261796 MODEL 8849285 protein-coding Jund JunD proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); cardiomyopathy (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955524 3176849 3177936 + 102021168 AGCD01068864;GBBH01001664;GBCE01004168;XM_005409566 XP_005409623 MODEL 8735085 ncrna LOC102013311 uncharacterized LOC102013311 NW_004955499 2225788 2230856 + 102013311 AGCD01063428;GBDK01220024;XR_001231465 MODEL 8850870 ncrna LOC102016281 uncharacterized LOC102016281 NW_004955493 865830 871320 - 102016281 AGCD01060868;GBDJ01318375;XR_001231284;XR_001231285;XR_264071;XR_264072 MODEL 39133958 misc_rna 7SK 7SK RNA 8832926 protein-coding LOC102010535 protein FAM47A-like NW_004955587 258217 259881 - 102010535 AGCD01076061;GBDF01017135;XM_005414446 XP_005414503 MODEL 39134229 misc_rna 7SK 7SK RNA 39131750 rrna 5S_rRNA 5S ribosomal RNA 9058595 protein-coding C1qb complement C1q B chain ENCODES a protein that exhibits identical protein binding (ortholog); IgG binding (ortholog); IgM binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); inner ear development (ortholog); response to glucocorticoid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); C1q Deficiency (ortholog); C1q Deficiency 2 (ortholog); FOUND IN complement component C1 complex (ortholog); complement component C1q complex (ortholog); extracellular region (ortholog) NW_004955452 2765844 2771695 + 102010120 AGCD01043903;GBCE01000145;XM_005394745;XM_013519694 XP_005394802;XP_013375148 MODEL 8713993 protein-coding LOC102009385 olfactory receptor 2T27-like NW_004955418 29991095 30001887 - 102009385 AGCD01019496;XM_005382363 XP_005382420 MODEL 8935612 ncrna LOC102005742 uncharacterized LOC102005742 NW_004955432 18897605 18899874 + 102005742 AGCD01031161;GBDF01006386;XR_261534 MODEL 8928113 pseudo LOC102020399 U6 snRNA-associated Sm-like protein LSm5 pseudogene NW_004955450 3686193 3686602 + 102020399 AGCD01042440;XM_005393581 MODEL 8729600 ncrna LOC102013669 uncharacterized LOC102013669 NW_004955402 23332562 23349864 - 102013669 AGCD01000621;AGCD01000622;XR_259064 MODEL 8781413 protein-coding Etfb electron transfer flavoprotein subunit beta ENCODES a protein that exhibits electron transfer activity (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH chronic kidney disease (ortholog); genetic disease (ortholog); multiple acyl-CoA dehydrogenase deficiency (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955558 1032743 1046300 + 102013655 AGCD01073411;AGCD01073412;GBCQ01010793;XM_005412686 XP_005412743 MODEL 8775789 protein-coding LOC102014801 uncharacterized LOC102014801 NW_004955497 6692788 6695333 + 102014801 AGCD01062644;AGCD01062645;GBCQ01143247;XM_013505453 XP_013360907 MODEL 8716418 protein-coding CUNH3orf38 chromosome unknown C3orf38 homolog INVOLVED IN positive regulation of apoptotic process (ortholog); FOUND IN nucleus (ortholog) NW_004955407 5339389 5348894 - 102022463 AGCD01006912;AGCD01006913;GBDK01359287;XM_005375526;XM_005375527 XP_005375583;XP_005375584 MODEL 8863471 protein-coding LOC102021901 thioredoxin domain-containing protein 2-like NW_004955504 1761700 1768176 - 102021901 AGCD01064847;XM_005407083 XP_005407140 MODEL 8862879 protein-coding LOC102003926 multidrug resistance protein 3 NW_004955607 307152 369339 + 102003926 AGCD01076983;AGCD01076984;XM_005414906;XM_013510114 XP_005414963;XP_013365568 MODEL 8942369 protein-coding LOC102019384 uncharacterized LOC102019384 NW_004955470 548231 553573 - 102019384 AGCD01052614;XM_013522687 XP_013378141 MODEL 9039898 ncrna LOC102015525 uncharacterized LOC102015525 NW_004955485 770228 773226 + 102015525 AGCD01058458;GBDF01201799;XR_263901 MODEL 8734097 protein-coding Epgn epithelial mitogen ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FOUND IN extracellular space (ortholog); plasma membrane (ortholog) NW_004955474 564329 573014 + 102006240 AGCD01054223;XM_005401311;XM_013502765;XM_013502766 XP_005401368;XP_013358219;XP_013358220 MODEL 8768005 pseudo LOC102020762 polyadenylate-binding protein-interacting protein 1-like NW_004955407 39022901 39024014 - 102020762 AGCD01007820 MODEL 8703103 protein-coding Htr7 5-hydroxytryptamine receptor 7 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); neurotransmitter receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); behavioral response to pain (ortholog); detection of mechanical stimulus involved in sensory perception of pain (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH alcohol use disorder (ortholog); amnestic disorder (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); cilium (ortholog); dendrite (ortholog) NW_004955425 2321420 2420420 + 102012876 AGCD01025258;AGCD01025259;AGCD01025260;AGCD01025261;AGCD01025262;AGCD01025263;GBDF01050691;GBDF01050693;XM_005385841;XM_005385842;XM_005385844 XP_005385898;XP_005385899;XP_005385901 MODEL 8784848 protein-coding Kctd15 potassium channel tetramerization domain containing 15 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN nucleus (ortholog) NW_004955468 3517470 3531074 + 102029611 AGCD01051861;GBDJ01018566;GBDK01361513;XM_005399994 XP_005400051 MODEL 8987439 protein-coding Grk1 G protein-coupled receptor kinase 1 ENCODES a protein that exhibits rhodopsin kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); photoreceptor cell morphogenesis (ortholog); positive regulation of phosphorylation (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH congenital stationary night blindness (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); photoreceptor outer segment (ortholog) NW_004955404 343009 353683 - 102029694 AGCD01003199;XM_005373936 XP_005373993 MODEL 8739383 ncrna LOC102007895 uncharacterized LOC102007895 NW_004955482 3978633 3990270 + 102007895 AGCD01057276;AGCD01057277;GBDI01191861;XR_263829 MODEL 8797150 protein-coding Ctnna1 catenin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN apical junction assembly (ortholog); axon regeneration (ortholog); cellular response to indole-3-methanol (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); catenin complex (ortholog) NW_004955418 1592555 1754423 - 102024007 AGCD01018724;AGCD01018725;AGCD01018726;AGCD01018727;GBCB01002985;XM_005382092;XM_013513007 XP_005382149;XP_013368461 MODEL 9026854 protein-coding LOC102011750 interstitial collagenase NW_004955412 5994105 6001239 - 102011750 AGCD01012662;XM_005378615 XP_005378672 MODEL 8835382 ncrna LOC102010538 uncharacterized LOC102010538 NW_004955403 1911461 1914126 - 102010538 AGCD01001726;GBDF01042347;XR_259133 MODEL 10251936 protein-coding LOC106149997 basic proline-rich protein-like NW_004955460 10360557 10360799 + 106149997 AGCD01048580;GBBH01150818;XM_013521139 XP_013376593 MODEL 9030055 pseudo LOC102017800 heterogeneous nuclear ribonucleoproteins A2/B1 pseudogene NW_004955428 18182006 18184385 - 102017800 AGCD01028058 MODEL 8770468 protein-coding Dlg1 discs large MAGUK scaffold protein 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); kinesin binding (ortholog); INVOLVED IN actin filament organization (ortholog); activation of protein kinase activity (ortholog); amyloid precursor protein metabolic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH cervix uteri carcinoma in situ (ortholog); cleft palate (ortholog); invasive ductal carcinoma (ortholog); FOUND IN basal plasma membrane (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955420 13068289 13273805 - 102018402 AGCD01020914;AGCD01020915;AGCD01020916;AGCD01020917;AGCD01020918;AGCD01020919;GBCB01057993;XM_005383157;XM_005383158;XM_005383159;XM_005383163;XM_005383165;XM_005383166;XM_005383167;XM_013513450;XM_013513452;XM_013513453 XP_005383214;XP_005383215;XP_005383216;XP_005383220;XP_005383222;XP_005383223;XP_005383224;XP_013368904;XP_013368906;XP_013368907 MODEL 8994078 protein-coding LOC102014026 uncharacterized LOC102014026 NW_004955412 13200937 13230604 + 102014026 AGCD01012829;GBBH01091540;XM_005378060;XM_005378061;XM_005378062;XM_005378063;XM_005378064;XM_005378065;XM_005378066;XM_005378067;XM_013511002;XM_013511003;XM_013511004 XP_005378117;XP_005378118;XP_005378119;XP_005378120;XP_005378121;XP_005378122;XP_005378123;XP_005378124;XP_013366456;XP_013366457;XP_013366458 MODEL 39131892 rrna 5S_rRNA 5S ribosomal RNA 8970211 protein-coding Creb5 cAMP responsive element binding protein 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); basal cell carcinoma (ortholog); Habitual Abortions (ortholog); FOUND IN nucleus (ortholog) NW_004955410 29982965 30371861 + 102011185 AGCD01011299;AGCD01011300;AGCD01011301;AGCD01011302;AGCD01011303;AGCD01011304;GBDI01267826;XM_005377470;XM_005377471 XP_005377527;XP_005377528 MODEL 9048252 protein-coding C1qbp complement C1q binding protein ENCODES a protein that exhibits adrenergic receptor binding (ortholog); C5-methylcytidine-containing RNA reader activity (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); mitochondrial RNA catabolic process (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); combined oxidative phosphorylation deficiency 33 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 10788142 10792272 - 102027161 AGCD01051583;GBDJ01090000;GBDK01129135;XM_013522096 XP_013377550 MODEL 9049702 protein-coding LOC102012903 CMRF35-like molecule 4 NW_004955553 1487167 1496439 - 102012903 AGCD01072886;GBCE01119428;XM_005412249;XM_005412250 XP_005412306;XP_005412307 MODEL 8712674 protein-coding LOC102012144 cytochrome b5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN response to cadmium ion (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Congenital Methemoglobinemia (ortholog); endometriosis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 57701931 57739163 - 102012144 AGCD01001508;AGCD01001509;GBDK01022341;XM_005373076 XP_005373133 MODEL 8782076 ncrna LOC102011289 uncharacterized LOC102011289 NW_004955411 10258447 10278073 - 102011289 AGCD01011777;GBDF01225406;XR_001232804 MODEL 8724632 protein-coding LOC102008614 cytochrome c oxidase subunit 7A1, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog); respiratory chain complex IV (ortholog) NW_004955468 2442819 2445169 + 102008614 AGCD01051817;GBCQ01010676;XM_005399919 XP_005399976 MODEL 10133507 protein-coding Defb136 defensin beta 136 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); antifungal innate immune response (ortholog); defense response to Gram-negative bacterium (ortholog); ASSOCIATED WITH thoracic aortic aneurysm (ortholog) NW_004955403 53168733 53170177 - 106148661 AGCD01003039;GBCQ01107685;XM_013514930 XP_013370384 MODEL 39131432 protein-coding IGLV2-33 immunoglobulin lambda variable 2-33 (non-functional) 8827329 pseudo LOC102014803 ewing's tumor-associated antigen 1 pseudogene NW_004955498 7169790 7172174 - 102014803 AGCD01063145 MODEL 8764573 protein-coding Anp32b acidic nuclear phosphoprotein 32 family member B ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN inner ear development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell differentiation (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH Spinal Cord Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955419 27471539 27553078 - 102021129 AGCD01020438;AGCD01020439;AGCD01020440;AGCD01020441;GBCB01080205;XM_005382838;XM_005382839;XM_013513224 XP_005382895;XP_005382896;XP_013368678 MODEL 8887171 pseudo LOC102016284 protein AF1q-like NW_004955493 6300422 6301768 + 102016284 AGCD01061086 MODEL 8907832 protein-coding Eif5a eukaryotic translation initiation factor 5A ENCODES a protein that exhibits RNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); cellular response to virus (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 9603800 9608490 - 102021110 AGCD01051519;GBDK01109542;XM_005399521;XM_005399522 XP_005399578;XP_005399579 MODEL 8793780 protein-coding Jup junction plakoglobin ENCODES a protein that exhibits alpha-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 12 (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog) NW_004955451 15993055 16004152 - 102006196 AGCD01043645;AGCD01043646;GBDF01123916;GBDK01018922;XM_013519431 XP_013374885 MODEL 8823142 protein-coding Dcaf4 DDB1 and CUL4 associated factor 4 FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955523 2395834 2421337 - 102004510 AGCD01068578;AGCD01068579;AGCD01068580;GBCE01116984;XM_005409439 XP_005409496 MODEL 8962726 protein-coding LOC102014428 carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein NW_004955462 13941877 14243305 - 102014428 AGCD01049435;AGCD01049436;AGCD01049437;AGCD01049438;AGCD01049439;AGCD01049440;AGCD01049441;AGCD01049442;AGCD01049443;GBBH01126298;GBBH01126300;XM_005398278 XP_005398335 MODEL 9013291 protein-coding Dtwd1 DTW motif tRNA-uridine aminocarboxypropyltransferase 1 ENCODES a protein that exhibits tRNA-uridine aminocarboxypropyltransferase activity (ortholog); INVOLVED IN tRNA modification (ortholog); FOUND IN nucleus (ortholog) NW_004955409 4550906 4568484 - 102009021 AGCD01009292;GBCQ01127324;XM_005376691;XM_005376693;XM_013510297 XP_005376748;XP_005376750;XP_013365751 MODEL 8961610 protein-coding LOC102024596 olfactory receptor 4C11-like NW_004955511 318058 318990 + 102024596 AGCD01066327;XM_005407940 XP_005407997 MODEL 9053426 ncrna LOC102009386 uncharacterized LOC102009386 NW_004955483 2296014 2317875 + 102009386 AGCD01057673;GBDF01118867;XR_001231019 MODEL 8856089 pseudo LOC102009017 60S ribosomal protein L14 pseudogene NW_004955408 1564719 1565405 - 102009017 AGCD01007965 MODEL 8824148 protein-coding Abca7 ATP binding cassette subfamily A member 7 ENCODES a protein that exhibits apolipoprotein A-I receptor activity (ortholog); floppase activity (ortholog); phosphatidylcholine floppase activity (ortholog); INVOLVED IN amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta formation (ortholog); apolipoprotein A-I-mediated signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 9 (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955495 6818002 6838177 - 102013842 AGCD01062097;GBBH01062757;XM_013505096;XM_013505097;XM_013505098;XM_013505099;XM_013505100;XM_013505101;XM_013505102 XP_013360550;XP_013360551;XP_013360552;XP_013360553;XP_013360554;XP_013360555;XP_013360556 MODEL 8821238 protein-coding Acot7 acyl-CoA thioesterase 7 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); fatty acid catabolic process (ortholog); long-chain fatty-acyl-CoA catabolic process (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955486 6188102 6258230 + 102012542 AGCD01059113;AGCD01059114;AGCD01059115;GBDI01078626;XM_005404096;XM_005404097;XM_013504310 XP_005404153;XP_005404154;XP_013359764 MODEL 8849921 protein-coding Ing1 inhibitor of growth family member 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein import into nucleus (ortholog); regulation of programmed cell death (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955404 1998665 1999615 - 102012052 AGCD01003243;GBDF01087133;GBDI01222670;XM_013515751 XP_013371205 MODEL 8977679 protein-coding LOC102014027 olfactory receptor 2B11-like NW_004955465 13748530 13762288 - 102014027 AGCD01050621;GBDF01098883;XM_005398974;XM_005398975 XP_005399031;XP_005399032 MODEL 9020739 protein-coding CUNH3orf62 chromosome unknown C3orf62 homolog INVOLVED IN spermatogenesis (ortholog) NW_004955532 1243732 1245499 - 102011802 AGCD01070174;GBDF01008216;GBDI01135952;XM_005410196 XP_005410253 MODEL 8700907 protein-coding LOC102003927 PRAME family member 20-like NW_004955615 78379 80979 - 102003927 AGCD01077249;XM_013510138 XP_013365592 MODEL 39133959 misc_rna 7SK 7SK RNA 9049328 pseudo LOC102019385 signal peptide peptidase-like 2A pseudogene NW_004955472 8166187 8167552 - 102019385 AGCD01053640 MODEL 8710684 protein-coding Fermt1 FERM domain containing kindlin 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN basement membrane organization (ortholog); cell adhesion (ortholog); establishment of epithelial cell polarity (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Atrophy (ortholog); Erythema (ortholog); genetic disease (ortholog); FOUND IN cell junction (ortholog); cell periphery (ortholog); cytoplasm (ortholog) NW_004955415 16447921 16483221 - 102017978 AGCD01016382;AGCD01016383;AGCD01016384;AGCD01016385;AGCD01016386;AGCD01016387;GBBH01008568;GBDK01181773;XM_013512377 XP_013367831 MODEL 8886552 ncrna LOC102016638 uncharacterized LOC102016638 NW_004955441 7376176 7408379 + 102016638 AGCD01036961;AGCD01036962;AGCD01036963;GBBH01145778;XR_001235339;XR_001235340 MODEL 39131751 rrna 5S_rRNA 5S ribosomal RNA 8931695 protein-coding Kctd16 potassium channel tetramerization domain containing 16 ENCODES a protein that exhibits obsolete G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential (ortholog); obsolete G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN behavioral fear response (ortholog); memory (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN postsynaptic membrane (ortholog); presynaptic membrane (ortholog); receptor complex (ortholog) NW_004955415 9511749 9795134 - 102021004 AGCD01016106;AGCD01016107;AGCD01016108;AGCD01016109;AGCD01016110;GBDF01016348;XM_013512333;XM_013512334;XM_013512335 XP_013367787;XP_013367788;XP_013367789 MODEL 8978265 pseudo LOC102005743 zinc finger protein 140-like NW_004955515 861668 865164 + 102005743 AGCD01067211;XM_005408920 MODEL 8907057 protein-coding Ctnna2 catenin alpha 2 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); brain morphogenesis (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 9 (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955424 5985170 7055830 - 102012337 AGCD01024414;AGCD01024415;AGCD01024416;AGCD01024417;AGCD01024418;AGCD01024419;AGCD01024420;AGCD01024421;AGCD01024422;AGCD01024423;AGCD01024424;AGCD01024425;AGCD01024426;AGCD01024427;AGCD01024428;AGCD01024429;AGCD01024430;AGCD01024431;AGCD01024432;GBDF01085911;XM_005385453;XM_005385454 XP_005385510;XP_005385511 MODEL 9019091 protein-coding Epha1 EPH receptor A1 ENCODES a protein that exhibits ephrin receptor activity (ortholog); fibronectin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); negative regulation of cell migration (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Alzheimer's disease (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Colorectal Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955494 256008 268777 + 102024246 AGCD01061372;GBBH01102984;GBDI01325851;XM_005405360;XM_013504977 XP_005405417;XP_013360431 MODEL 10218039 ncrna LOC106149998 uncharacterized LOC106149998 NW_004955460 9778126 9783630 - 106149998 AGCD01048551;XR_001236508 MODEL 8988367 pseudo LOC102011759 coiled-coil domain-containing protein 117 pseudogene NW_004955414 22445100 22446162 - 102011759 AGCD01015456 MODEL 39131894 rrna 5S_rRNA 5S ribosomal RNA 8745735 pseudo LOC102021184 UMP-CMP kinase-like NW_004955445 7315816 7316614 - 102021184 AGCD01039538 MODEL 8797129 pseudo LOC102021902 dnaJ homolog subfamily C member 21 pseudogene NW_004955509 2211423 2213015 - 102021902 AGCD01065993 MODEL 8751857 protein-coding Crebbp CREB binding lysine acetyltransferase ENCODES a protein that exhibits acetyltransferase activity (ortholog); cAMP response element binding protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cAMP/PKA signal transduction (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); histone acetyltransferase complex (ortholog) NW_004955442 13559496 13691913 + 102018134 AGCD01037785;AGCD01037786;GBBH01093313;GBCB01005807;XM_005391317 XP_005391374 MODEL 39134231 misc_rna 7SK 7SK RNA 8942198 protein-coding LOC102008255 steroid 21-hydroxylase ENCODES a protein that exhibits 17-hydroxyprogesterone 21-hydroxylase activity (ortholog); heme binding (ortholog); progesterone 21-hydroxylase activity (ortholog); INVOLVED IN cortisol biosynthetic process (ortholog); steroid biosynthetic process (ortholog); steroid metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); congenital adrenal hyperplasia (ortholog); Congenital Adrenal Hyperplasia due to 21 Hydroxylase Deficiency (ortholog) NW_004955437 513052 516792 + 102008255 AGCD01034140;GBCE01017755;XM_005389407 XP_005389464 MODEL 8830439 protein-coding Clcn3 chloride voltage-gated channel 3 ENCODES a protein that exhibits antiporter activity (ortholog); chloride channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); Disease Progression (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); cytoplasmic vesicle (ortholog) NW_004955403 36625871 36710201 - 102002982 AGCD01002544;AGCD01002545;AGCD01002546;GBCC01015450;XM_005373554;XM_005373555;XM_005373556;XM_005373557;XM_005373558;XM_005373559;XM_005373560;XM_005373561;XM_005373562 XP_005373611;XP_005373612;XP_005373613;XP_005373614;XP_005373615;XP_005373616;XP_005373617;XP_005373618;XP_005373619 MODEL 8902394 pseudo LOC102014804 probable U3 small nucleolar RNA-associated protein 11 pseudogene NW_004955424 267580 270094 + 102014804 AGCD01024170 MODEL 8952678 protein-coding LOC102008615 zinc finger protein 792 NW_004955468 4295637 4302563 - 102008615 AGCD01051905;GBCQ01021284;XM_013522370;XM_013522371;XM_013522372;XM_013522373 XP_013377824;XP_013377825;XP_013377826;XP_013377827 MODEL 8837576 ncrna LOC102016285 uncharacterized LOC102016285 NW_004955422 29292788 29300906 - 102016285 AGCD01023387;GBBH01024620;XR_001233958;XR_260933 MODEL 8753427 protein-coding Degs1 delta 4-desaturase, sphingolipid 1 ENCODES a protein that exhibits retinol isomerase activity (ortholog); sphingolipid delta-4 desaturase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); myelin maintenance (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 18 (ortholog); leukodystrophy (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) NW_004955520 1139568 1143149 - 102010618 AGCD01068044;GBDF01002918;GBDJ01020741;XM_005409229 XP_005409286 MODEL 8785126 protein-coding CUNH3orf70 chromosome unknown C3orf70 homolog ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955420 22426369 22493624 + 102014570 AGCD01021199;AGCD01021200;AGCD01021201;GBBH01126853;GBDI01223181;XM_005383303 XP_005383360 MODEL 8972276 protein-coding Htra1 HtrA serine peptidase 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular function activator activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH age related macular degeneration (ortholog); age related macular degeneration 7 (ortholog); autosomal dominant cerebral arteriopathy with subcortical infarcts and leukoencephalopathy 2 (ortholog); FOUND IN extracellular matrix (ortholog); plasma membrane (ortholog) NW_004955477 761127 808396 + 102009942 AGCD01055495;GBBH01032145;XM_013503081 XP_013358535 MODEL 8871601 ncrna LOC102020408 uncharacterized LOC102020408 NW_004955404 30460342 30494908 + 102020408 AGCD01004008;AGCD01004009;GBDK01040755;XR_001234883;XR_001234884 MODEL 8836503 protein-coding Grk2 G protein-coupled receptor kinase 2 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); delta-type opioid receptor binding (ortholog); Edg-2 lysophosphatidic acid receptor binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to catecholamine stimulus (ortholog); cellular response to chemokine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; ASSOCIATED WITH allergic contact dermatitis (ortholog); asphyxiating thoracic dystrophy (ortholog); bacterial pneumonia (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); basolateral plasma membrane (ortholog) NW_004955422 18173438 18192357 - 102025370 AGCD01022939;GBCC01034320;XM_005384356;XM_013513945;XM_013513946 XP_005384413;XP_013369399;XP_013369400 MODEL 8924631 pseudo LOC102015908 syntenin-1 pseudogene NW_004955402 63207510 63211180 + 102015908 AGCD01001665 MODEL 8724659 protein-coding LOC102009784 small proline-rich protein 2E NW_004955592 315272 316198 + 102009784 AGCD01076302;XM_005414611 XP_005414668 MODEL 8835659 pseudo LOC102017802 transcription factor SPT20 homolog pseudogene NW_004955509 4675525 4678213 - 102017802 AGCD01066084;XM_005407843 MODEL 8939945 protein-coding Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); peptidyl-lysine trimethylation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955411 35999583 36025805 + 102028280 AGCD01012462;AGCD01012463;GBBH01053291;XM_005377897;XM_005377898;XM_005377899;XM_005377900;XR_001232832 XP_005377954;XP_005377955;XP_005377956;XP_005377957 MODEL 9039139 pseudo LOC102015530 40S ribosomal protein S12 pseudogene NW_004955492 1654556 1654953 - 102015530 AGCD01060664 MODEL 8954832 protein-coding Dlg2 discs large MAGUK scaffold protein 2 ENCODES a protein that exhibits kinase binding (ortholog); PDZ domain binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to potassium ion (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH melanoma (ortholog); schizophrenia (ortholog); FOUND IN axon initial segment (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955414 7247248 9171664 + 102022378 AGCD01014951;AGCD01014952;AGCD01014953;AGCD01014954;AGCD01014955;AGCD01014956;AGCD01014957;AGCD01014958;AGCD01014959;AGCD01014960;AGCD01014961;AGCD01014962;AGCD01014963;AGCD01014964;AGCD01014965;AGCD01014966;AGCD01014967;AGCD01014968;AGCD01014969;AGCD01014970;AGCD01014971;AGCD01014972;AGCD01014973;AGCD01014974;AGCD01014975;AGCD01014976;AGCD01014977;AGCD01014978;AGCD01014979;AGCD01014980;AGCD01014981;AGCD01014982;AGCD01014983;AGCD01014984;AGCD01014985;AGCD01014986;AGCD01014987;AGCD01014988;AGCD01014989;AGCD01014990;AGCD01014991;AGCD01014992;AGCD01014993;AGCD01014994;AGCD01014995;AGCD01014996;AGCD01014997;AGCD01014998;AGCD01014999;AGCD01015000;AGCD01015001;AGCD01015002;AGCD01015003;AGCD01015004;AGCD01015005;AGCD01015006;AGCD01015007;AGCD01015008;AGCD01015009;AGCD01015010;GBDK01207539;XM_005379786;XM_005379787;XM_005379790;XM_013511774;XM_013511775;XM_013511776;XM_013511777;XM_013511778;XM_013511779;XM_013511780;XM_013511781;XM_013511782;XM_013511783;XM_013511784;XM_013511785;XM_013511786;XM_013511787;XM_013511788;XM_013511789;XM_013511790;XM_013511791 XP_005379843;XP_005379844;XP_005379847;XP_013367228;XP_013367229;XP_013367230;XP_013367231;XP_013367232;XP_013367233;XP_013367234;XP_013367235;XP_013367236;XP_013367237;XP_013367238;XP_013367239;XP_013367240;XP_013367241;XP_013367242;XP_013367243;XP_013367244;XP_013367245 MODEL 8758135 protein-coding C1qc complement C1q C chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); negative regulation of granulocyte differentiation (ortholog); negative regulation of macrophage differentiation (ortholog); ASSOCIATED WITH C1q Deficiency (ortholog); C1q Deficiency 3 (ortholog); COVID-19 (ortholog); FOUND IN complement component C1 complex (ortholog); complement component C1q complex (ortholog); extracellular region (ortholog) NW_004955452 2759079 2762522 + 102009794 AGCD01043903;GBDI01004925;XM_005394744 XP_005394801 MODEL 8734323 protein-coding LOC102012904 heterogeneous nuclear ribonucleoproteins A2/B1-like NW_004955442 15309996 15311329 - 102012904 AGCD01037865;GBDF01258035;XM_005391493 XP_005391550 MODEL 39131895 rrna 5S_rRNA 5S ribosomal RNA 8891422 ncrna LOC102011290 uncharacterized LOC102011290 NW_004955464 5744512 5747225 + 102011290 AGCD01050012;AGCD01050013;GBDF01041677;XR_263200 MODEL 9042013 ncrna LOC102020765 uncharacterized LOC102020765 NW_004955457 10726401 10733207 + 102020765 AGCD01046956;GBDF01222869;XR_262931 MODEL 8751024 protein-coding Ing2 inhibitor of growth family member 2 ENCODES a protein that exhibits DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); male germ-line stem cell asymmetric division (ortholog); male meiosis I (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 25325600 25331175 - 102009672 AGCD01002286;AGCD01002287;GBDF01188823;XM_005373503 XP_005373560 MODEL 8819300 ncrna LOC102003928 uncharacterized LOC102003928 NW_004955403 24016583 24021309 + 102003928 AGCD01002266;GBDK01211102;XR_259201 MODEL 8720398 protein-coding LOC102007896 olfactory receptor 1J1-like NW_004955419 5455988 5456929 + 102007896 AGCD01019810;XM_005382528 XP_005382585 MODEL 8844251 ncrna LOC102019386 uncharacterized LOC102019386 NW_004955415 31794197 31797398 + 102019386 AGCD01016697;GBDF01178246;XR_001233216;XR_260331 MODEL 8966730 ncrna LOC102013670 uncharacterized LOC102013670 NW_004955588 40134 44201 - 102013670 AGCD01076078;AGCD01076079;GBDF01235165;XR_265116 MODEL 8723653 protein-coding Eif5a2 eukaryotic translation initiation factor 5A2 ASSOCIATED WITH Premature Aging (ortholog) NW_004955420 1032801 1044393 - 102022604 AGCD01020560;AGCD01020561;GBDI01317060;GBDJ01306217;XM_013513425 XP_013368879 MODEL 9060820 ncrna LOC102014430 uncharacterized LOC102014430 NW_004955464 741775 757988 + 102014430 AGCD01049941;GBDF01221961;XR_001236659;XR_001236660;XR_001236661;XR_001236662;XR_001236663;XR_001236664;XR_001236665;XR_001236666 MODEL 39131752 rrna 5S_rRNA 5S ribosomal RNA 8939657 pseudo LOC102016639 DNA-binding protein SATB1-like NW_004955550 693157 695974 - 102016639 AGCD01072516 MODEL 9035835 protein-coding Dcaf5 DDB1 and CUL4 associated factor 5 FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955466 1216966 1322704 + 102030400 AGCD01050696;AGCD01050697;AGCD01050698;AGCD01050699;AGCD01050700;GBBH01187496;XM_005399043;XM_005399044 XP_005399100;XP_005399101 MODEL 8707293 protein-coding LOC102014805 male-specific submandibular salivary gland protein-like NW_004955499 3197990 3217211 - 102014805 AGCD01063457;AGCD01063458;GBCC01016299;XM_005406529;XM_005406530;XM_005406531 XP_005406586;XP_005406587;XP_005406588 MODEL 8891894 protein-coding Dtwd2 DTW motif tRNA-uridine aminocarboxypropyltransferase 2 ENCODES a protein that exhibits tRNA-uridine aminocarboxypropyltransferase activity (ortholog); INVOLVED IN glycoRNA biosynthetic process (ortholog); tRNA modification (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955408 38497442 38609561 - 102029939 AGCD01009041;AGCD01009042;AGCD01009043;AGCD01009044;AGCD01009045;AGCD01009046;AGCD01009047;GBBH01226018;GBCB01111751;XM_013506983 XP_013362437 MODEL 8920903 pseudo LOC102013317 eukaryotic initiation factor 4A-I-like NW_004955428 6591052 6624236 - 102013317 AGCD01027743;AGCD01027744 MODEL 8977656 protein-coding Epha10 EPH receptor A10 ENCODES a protein that exhibits transmembrane-ephrin receptor activity (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 88 (ortholog) NW_004955452 15510054 15547769 - 102014005 AGCD01044486;AGCD01044487;GBDF01009991;XM_013519462 XP_013374916 MODEL 8784006 protein-coding Kctd17 potassium channel tetramerization domain containing 17 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); positive regulation of cilium assembly (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); myoclonic dystonia (ortholog); myoclonic dystonia 26 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955413 23568540 23578292 + 102026847 AGCD01014332;GBDI01160354;XM_005379184;XM_005379185;XM_005379186;XM_005379187;XM_005379188;XM_005379191;XR_001233020 XP_005379241;XP_005379242;XP_005379243;XP_005379244;XP_005379245;XP_005379248 MODEL 8731398 pseudo LOC102009787 glucose 1,6-bisphosphate synthase pseudogene NW_004955402 47456121 47465974 - 102009787 AGCD01001183;AGCD01001184;AGCD01001185;AGCD01001186;AGCD01001187 MODEL 8700555 protein-coding LOC102012146 3-alpha-hydroxysteroid sulfotransferase-like NW_004955609 372015 408109 - 102012146 AGCD01077059;AGCD01077060;GBDI01156067;XM_005414932 XP_005414989 MODEL 8984553 protein-coding LOC102009387 bile acid-CoA:amino acid N-acyltransferase-like NW_004955419 24443222 24466306 + 102009387 AGCD01020347;GBDJ01035584;XM_005382801;XM_013513082 XP_005382858;XP_013368536 MODEL 8761863 protein-coding Htra2 HtrA serine peptidase 2 ENCODES a protein that exhibits identical protein binding (ortholog); peptidase activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 8 (ortholog); Alzheimer's disease (ortholog); asphyxia neonatorum (ortholog); FOUND IN CD40 receptor complex (ortholog); chromatin (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955424 11255756 11259170 - 102023165 AGCD01024559;GBDI01134304;XM_005385489 XP_005385546 MODEL 8793096 protein-coding LOC102009018 up-regulator of cell proliferation NW_004955456 7974915 7999963 + 102009018 AGCD01046440;AGCD01046441;AGCD01046442;AGCD01046443;GBBH01208050;GBCE01137430;XM_013520521 XP_013375975 MODEL 39133960 misc_rna 7SK 7SK RNA 8876574 protein-coding LOC102014028 NXPE family member 1 ENCODES a protein that exhibits N-acetylneuraminate 9-O-acetyltransferase activity (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955412 16107277 16115577 - 102014028 AGCD01012893;XM_005378162;XM_013510993 XP_005378219;XP_013366447 MODEL 153211027 protein-coding IGLV3-1 immunoglobulin lambda variable 3-1 8911222 protein-coding C1ql1 complement C1q like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); motor learning (ortholog); neuron remodeling (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); climbing fiber (ortholog); cytoplasm (ortholog) NW_004955451 17729106 17734657 - 102008049 AGCD01043769;GBBH01106823;GBCQ01122993;XM_005394651 XP_005394708 MODEL 39131896 rrna 5S_rRNA 5S ribosomal RNA 39133961 misc_rna 7SK 7SK RNA 8810937 ncrna LOC102024597 uncharacterized LOC102024597 NW_004955511 2796192 2798196 + 102024597 AGCD01066428;GBDF01194807;XR_264420 MODEL 8753076 ncrna LOC102016289 uncharacterized LOC102016289 NW_004955424 1110503 1115154 - 102016289 AGCD01024231;GBDF01013947;XR_261020 MODEL 8740017 pseudo LOC102011763 40S ribosomal protein S24 pseudogene NW_004955478 9920867 9921511 - 102011763 AGCD01056109 MODEL 8773751 protein-coding Ctnna3 catenin alpha 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); regulation of heart rate by cardiac conduction (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 13 (ortholog); asthma (ortholog); childhood-onset asthma (ortholog); FOUND IN adherens junction (ortholog); fascia adherens (ortholog); lamellipodium (ortholog) NW_004955425 18623645 20126200 - 102028655 AGCD01025676;AGCD01025677;AGCD01025678;AGCD01025679;AGCD01025680;AGCD01025681;AGCD01025682;AGCD01025683;AGCD01025684;AGCD01025685;AGCD01025686;AGCD01025687;AGCD01025688;AGCD01025689;AGCD01025690;AGCD01025691;AGCD01025692;AGCD01025693;AGCD01025694;AGCD01025695;AGCD01025696;AGCD01025697;AGCD01025698;AGCD01025699;AGCD01025700;AGCD01025701;AGCD01025702;AGCD01025703;AGCD01025704;AGCD01025705;AGCD01025706;AGCD01025707;AGCD01025708;AGCD01025709;AGCD01025710;AGCD01025711;AGCD01025712;AGCD01025713;AGCD01025714;AGCD01025715;AGCD01025716;GBCB01051182;XM_005385969;XM_005385970;XM_013514887;XM_013514888 XP_005386026;XP_005386027;XP_013370341;XP_013370342 MODEL 39131753 rrna 5S_rRNA 5S ribosomal RNA 8890880 protein-coding LOC102021185 zinc finger protein 444-like NW_004955567 487229 494912 - 102021185 AGCD01074406;GBBH01167164;GBDI01263884;XM_013509302 XP_013364756 MODEL 8792024 ncrna LOC102015536 uncharacterized LOC102015536 NW_004955494 2042184 2070282 + 102015536 AGCD01061434;GBDF01220369;XR_264105 MODEL 8752632 protein-coding LOC102021903 olfactory receptor 1038 NW_004955511 1563422 1564360 - 102021903 AGCD01066371;XM_005408237 XP_005408294 MODEL 8983906 protein-coding LOC102010539 T-complex protein 1 subunit alpha-like NW_004957703 193 1109 - 102010539 AGCD01081099;GBCC01015007;GBDI01244130;XM_005415234 XP_005415291 MODEL 8866316 protein-coding Fermt2 FERM domain containing kindlin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); cell adhesion (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); angle-closure glaucoma (ortholog); urinary bladder cancer (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955409 10285780 10327286 + 102007863 AGCD01009464;GBDJ01002066;XM_005376773 XP_005376830 MODEL 39134232 misc_rna 7SK 7SK RNA 9010934 protein-coding LOC102008619 E3 ISG15--protein ligase HERC5-like NW_004955474 12020037 12065002 - 102008619 AGCD01054645;AGCD01054646;GBBH01011708;GBCE01069694;XM_013502751 XP_013358205 MODEL 8817967 protein-coding LOC102009019 glycosylation-dependent cell adhesion molecule 1-like NW_004955458 1841699 1848240 - 102009019 AGCD01047206;GBCB01051309;XM_005397231 XP_005397288 MODEL 8802784 protein-coding LOC102005749 tenascin-X-like NW_004955437 562600 578348 - 102005749 AGCD01034146;AGCD01034147;AGCD01034148;AGCD01034149;GBDI01324923;GBDK01430395;XM_013516899 XP_013372353 MODEL 8823934 protein-coding Htra3 HtrA serine peptidase 3 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); proteolysis (ortholog); ASSOCIATED WITH Mycoplasma pneumoniae pneumonia (ortholog) NW_004955514 2716448 2740590 - 102007687 AGCD01067086;AGCD01067087;GBBH01126439;GBDF01112316;XM_013506746 XP_013362200 MODEL 8985571 protein-coding Kalrn kalirin RhoGEF kinase ENCODES a protein that exhibits enzyme binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axonogenesis (ortholog); habituation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cerebral atherosclerosis (ortholog); cerebral infarction (ortholog); coronary artery disease (ortholog); FOUND IN glutamatergic synapse (ortholog); neuronal cell body (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955427 23184751 23823128 + 102016828 AGCD01027482;AGCD01027483;AGCD01027484;AGCD01027485;AGCD01027486;AGCD01027487;AGCD01027488;AGCD01027489;AGCD01027490;AGCD01027491;AGCD01027492;AGCD01027493;GBDJ01071026;XM_005386533;XM_005386534;XM_005386535;XM_005386536;XM_005386537;XM_005386538;XM_005386539;XM_005386540;XM_005386541;XM_013515182;XM_013515183 XP_005386590;XP_005386591;XP_005386592;XP_005386593;XP_005386594;XP_005386595;XP_005386596;XP_005386597;XP_005386598;XP_013370636;XP_013370637 MODEL 8773867 protein-coding Degs2 delta 4-desaturase, sphingolipid 2 ENCODES a protein that exhibits sphingolipid C4-monooxygenase activity (ortholog); sphingolipid delta-4 desaturase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); sphinganine metabolic process (ortholog); sphingolipid biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway NW_004955438 21300118 21313330 - 102005417 AGCD01035532;GBCQ01124650;XM_005390429 XP_005390486 MODEL 8935775 ncrna LOC102013672 uncharacterized LOC102013672 NW_004955402 58006268 58037026 - 102013672 AGCD01001520;AGCD01001521;GBDJ01205595;XR_001232983 MODEL 8998347 protein-coding Grk3 G protein-coupled receptor kinase 3 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); D1 dopamine receptor binding (ortholog); G protein-coupled receptor kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); inositol phosphate metabolic process (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); Cardiomegaly (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN axon terminus (ortholog); dendrite terminus (ortholog); dendritic shaft (ortholog) NW_004955442 19640145 19785803 - 102026805 AGCD01038071;AGCD01038072;AGCD01038073;AGCD01038074;GBDI01324664;XM_005391839;XM_005391840;XM_013517965;XM_013517966 XP_005391896;XP_005391897;XP_013373419;XP_013373420 MODEL 8764493 ncrna LOC102017803 uncharacterized LOC102017803 NW_004955510 6353074 6359985 - 102017803 AGCD01066305;GBCQ01116243;XR_264413 MODEL 8740725 protein-coding Abca9 ATP binding cassette subfamily A member 9 ASSOCIATED WITH Colorectal Neoplasms (ortholog) NW_004955478 3718494 3785147 + 102025460 AGCD01055830;AGCD01055831;GBCE01034596;XM_005402114;XM_005402115 XP_005402171;XP_005402172 MODEL 8966323 protein-coding Acot8 acyl-CoA thioesterase 8 ENCODES a protein that exhibits choloyl-CoA hydrolase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); dicarboxylic acid catabolic process (ortholog); fatty acid biosynthetic process (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955445 11434649 11454806 + 102027914 AGCD01039693;AGCD01039694;AGCD01039695;GBDF01050826;XM_005392408 XP_005392465 MODEL 8873038 protein-coding Anp32e acidic nuclear phosphoprotein 32 family member E ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); phosphatase inhibitor activity (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) NW_004955413 531716 550480 + 102018909 AGCD01013475;AGCD01013476;AGCD01013477;GBCB01056546;GBDF01190815;XM_013511470 XP_013366924 MODEL 8958005 pseudo LOC102013318 nucleolin-like NW_004955510 6049576 6050426 + 102013318 AGCD01066299 MODEL 8949339 protein-coding LOC102009788 vomeronasal type-1 receptor 4-like NW_004955603 389482 390411 - 102009788 AGCD01076843;XM_005414844 XP_005414901 MODEL 8858677 ncrna LOC102012147 uncharacterized LOC102012147 NW_004955652 44834 52840 - 102012147 AGCD01077823;AGCD01077824;GBBH01127077;XR_265180 MODEL 8736580 pseudo LOC102020766 60S ribosomal protein L30-like NW_004955408 13245352 13245694 + 102020766 AGCD01008351 MODEL 9046730 protein-coding LOC102012905 tektin-4-like NW_004955442 16149329 16154459 + 102012905 AGCD01037891;AGCD01037892;GBDF01003534;XM_005391594 XP_005391651 MODEL 8761047 ncrna LOC102003929 uncharacterized LOC102003929 NW_004955758 2514 8463 + 102003929 AGCD01078291;GBCB01086463;XR_001232596;XR_001232597 MODEL 8791740 protein-coding Clcn4 chloride voltage-gated channel 4 ENCODES a protein that exhibits antiporter activity (ortholog); chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); non-motile cilium assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN ciliary base (ortholog); endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog) NW_004955544 2922338 2999979 - 102008352 AGCD01071744;AGCD01071745;AGCD01071746;AGCD01071747;GBCB01042883;XM_005411399 XP_005411456 MODEL 8987713 protein-coding LOC102015912 acyl-protein thioesterase 1-like NW_004955451 16240608 16241441 + 102015912 AGCD01043662;XM_005394451;XM_005394452 XP_005394508;XP_005394509 MODEL 8756407 ncrna LOC102020416 uncharacterized LOC102020416 NW_004955455 2040246 2047736 - 102020416 AGCD01045586;GBCB01023184;XR_262817 MODEL 8714507 protein-coding Ing3 inhibitor of growth family member 3 ENCODES a protein that exhibits histone H2A acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); piccolo histone acetyltransferase complex (ortholog) NW_004955479 2741554 2771524 + 102006242 AGCD01056281;GBDF01158853;XM_005402308;XM_005402309;XM_005402310;XM_013503291;XM_013503292 XP_005402365;XP_005402366;XP_005402367;XP_013358745;XP_013358746 MODEL 8840814 ncrna LOC102014432 uncharacterized LOC102014432 NW_004955465 9816511 9830674 - 102014432 AGCD01050495;GBDK01322747;XR_263263 MODEL 9019310 ncrna LOC102005750 uncharacterized LOC102005750 NW_004955438 21332657 21334526 - 102005750 AGCD01035537;GBDK01039687;XR_261957 MODEL 8881599 pseudo LOC102024598 serine/threonine-protein kinase PLK4-like NW_004955429 19408775 19420812 + 102024598 AGCD01028952 MODEL 8813485 ncrna LOC102011766 uncharacterized LOC102011766 NW_004955480 7767280 7832733 - 102011766 AGCD01056709;GBDI01142229;XR_001230909;XR_263746 MODEL 9015824 protein-coding Etfdh electron transfer flavoprotein dehydrogenase ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); electron transfer activity (ortholog); electron-transferring-flavoprotein dehydrogenase activity (ortholog); INVOLVED IN electron transport chain (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); response to oxidative stress (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH disease of metabolism (ortholog); genetic disease (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955471 12282601 12308792 + 102018591 AGCD01053282;AGCD01053283;AGCD01053284;AGCD01053285;GBBH01142163;GBDF01124988;XM_005400964 XP_005401021 MODEL 8762031 protein-coding Dtx1 deltex E3 ubiquitin ligase 1 ENCODES a protein that exhibits Notch binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glial cell differentiation (ortholog); negative regulation of neuron differentiation (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH oligodendroglioma (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955482 9416456 9447265 + 102007663 AGCD01057569;AGCD01057570;GBCE01117061;GBCQ01064129;XM_013503713 XP_013359167 MODEL 9066394 protein-coding Dlg3 discs large MAGUK scaffold protein 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN establishment of planar polarity (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955475 9992888 10056197 + 102024998 AGCD01055080;AGCD01055081;AGCD01055082;GBDI01210941;XM_005401627;XM_005401628;XM_005401629;XM_005401630;XM_005401631;XM_005401632;XM_005401633 XP_005401684;XP_005401685;XP_005401686;XP_005401687;XP_005401688;XP_005401689;XP_005401690 MODEL 8878516 protein-coding Kctd18 potassium channel tetramerization domain containing 18 NW_004955403 913621 923631 + 102006411 AGCD01001712;GBCE01029918;GBDI01063246;XM_013511934 XP_013367388 MODEL 8758835 protein-coding LOC102008260 PDZ domain-containing protein MAGIX NW_004955543 651286 655627 + 102008260 AGCD01071596;GBCE01116897;XM_005411322;XM_013508147;XM_013508148 XP_005411379;XP_013363601;XP_013363602 MODEL 8902180 protein-coding Ctnnal1 catenin alpha like 1 INVOLVED IN Rho protein signal transduction (ortholog); FOUND IN cytosol (ortholog) NW_004955419 17975242 18028100 + 102004283 AGCD01020168;GBBH01209679;XM_005382935 XP_005382992 MODEL 8700618 protein-coding LOC102014035 ral guanine nucleotide dissociation stimulator-like NW_004955413 4784689 4789519 + 102014035 AGCD01013628;GBDF01155508;XM_005378864 XP_005378921 MODEL 8821022 pseudo LOC102007900 la-related protein 7-like NW_004955419 25039993 25040565 - 102007900 AGCD01020367 MODEL 8753187 protein-coding CUNH4orf17 chromosome unknown C4orf17 homolog NW_004955496 8047756 8068982 - 102024357 AGCD01062388;GBDI01110530;XM_005406272 XP_005406329 MODEL 8901854 protein-coding LOC102013325 putative spermatogenesis-associated protein 31D4 NW_004955432 3999312 4004493 + 102013325 AGCD01030686;GBDF01049444;XM_005387970;XM_005387971 XP_005388027;XP_005388028 MODEL 10208793 ncrna LOC106149999 uncharacterized LOC106149999 NW_004955460 10259974 10263661 - 106149999 AGCD01048576;GBCE01142022;XR_001236509 MODEL 39131898 rrna 5S_rRNA 5S ribosomal RNA 8941825 protein-coding LOC102019395 acylcarnitine hydrolase-like NW_004955484 9624869 9637807 - 102019395 AGCD01058424;GBCQ01037834;XM_005403710;XM_005403711;XM_013504017 XP_005403767;XP_005403768;XP_013359471 MODEL 39133962 misc_rna 7SK 7SK RNA 8740072 protein-coding LOC102016643 sialic acid-binding Ig-like lectin 13 NW_004955558 1164289 1181891 - 102016643 AGCD01073421;GBDI01088226;XM_005412697;XM_005412698;XM_005412699;XM_013508895;XR_001232333 XP_005412754;XP_005412755;XP_005412756;XP_013364349 MODEL 39134233 misc_rna 7SK 7SK RNA 8940838 protein-coding LOC102014806 jerky protein-like NW_004955425 3330595 3331677 + 102014806 AGCD01025286;XM_005385847 XP_005385904 MODEL 8833817 protein-coding Eif5b eukaryotic translation initiation factor 5B ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); translation initiation factor activity (ortholog); INVOLVED IN regulation of translational initiation (ortholog); ribosome assembly (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955470 5622128 5676533 + 102012631 AGCD01052756;AGCD01052757;AGCD01052758;GBDF01004389;XM_005400747 XP_005400804 MODEL 8841586 ncrna LOC102016291 uncharacterized LOC102016291 NW_004955497 3686369 3690846 - 102016291 AGCD01062552;GBDK01031764;XR_264201 MODEL 8753508 pseudo LOC102013677 olfactory receptor 2L5-like NW_004955619 163965 164902 - 102013677 AGCD01077343 MODEL 39131754 rrna 5S_rRNA 5S ribosomal RNA 9065184 protein-coding LOC102017804 vomeronasal type-1 receptor 90-like NW_004955429 12364461 12365522 - 102017804 AGCD01028715;XM_005387247 XP_005387304 MODEL 8722765 pseudo LOC102015537 polyadenylate-binding protein 4 pseudogene NW_004955422 14754359 14755652 + 102015537 AGCD01022864 MODEL 8781541 protein-coding Crebl2 cAMP responsive element binding protein like 2 INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of fat cell differentiation (ortholog); FOUND IN nucleus (ortholog) NW_004955413 9513625 9535817 + 102017557 AGCD01013907;GBDK01130262;XM_005378967 XP_005379024 MODEL 8711635 pseudo LOC102021193 C-terminal-binding protein 2 pseudogene NW_004955450 17232209 17233685 + 102021193 AGCD01042865 MODEL 9031269 protein-coding Abcb1 ATP binding cassette subfamily B member 1 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN adult heart development (ortholog); aldosterone secretion (ortholog); carboxylic acid transmembrane transport (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute lymphoblastic leukemia (ortholog); adrenocortical carcinoma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955432 4911774 5085349 - 102016627 AGCD01030750;AGCD01030751;AGCD01030752;AGCD01030753;AGCD01030754;AGCD01030755;AGCD01030756;AGCD01030757;GBDJ01181374;XM_005387974 XP_005388031 MODEL 8785353 protein-coding Acot9 acyl-CoA thioesterase 9 ENCODES a protein that exhibits acetyl-CoA hydrolase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); long-chain fatty acid metabolic process (ortholog); short-chain fatty acid metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955509 4143246 4167129 - 102023177 AGCD01066054;GBDJ01352477;XM_013506293 XP_013361747 MODEL 39131436 protein-coding IGLV9-49 immunoglobulin lambda variable 9-49 8792751 protein-coding C1ql2 complement C1q like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); postsynaptic density assembly (ortholog); regulation of synapse maturation (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955459 10569064 10571064 + 102024767 AGCD01048192;GBDK01160507;XM_013521053 XP_013376507 MODEL 8843491 protein-coding Anpep alanyl aminopeptidase, membrane ENCODES a protein that exhibits aminopeptidase activity (ortholog); metallopeptidase activity (ortholog); peptide binding (ortholog); INVOLVED IN angiotensin maturation (ortholog); metanephric proximal tubule development (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; glutathione metabolic pathway; glutathione synthase deficiency pathway; ASSOCIATED WITH severe acute respiratory syndrome (ortholog); urinary bladder cancer (ortholog); FOUND IN brush border membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); external side of plasma membrane (ortholog) NW_004955416 15415981 15442032 + 102025000 AGCD01017328;AGCD01017329;AGCD01017330;GBDJ01129227;XM_005381541;XM_005381542;XM_013512629 XP_005381598;XP_005381599;XP_013368083 MODEL 9067402 protein-coding Dtx2 deltex E3 ubiquitin ligase 2 INVOLVED IN Notch signaling pathway (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955456 15034214 15070521 + 102009689 AGCD01046661;GBDK01084193;XM_005396816;XM_005396817;XM_005396820;XM_013520604;XM_013520605;XM_013520606;XM_013520607;XM_013520608;XM_013520609 XP_005396873;XP_005396874;XP_005396877;XP_013376058;XP_013376059;XP_013376060;XP_013376061;XP_013376062;XP_013376063 MODEL 8956492 pseudo LOC102008621 josephin-1 pseudogene NW_004955477 274210 274810 + 102008621 AGCD01055485 MODEL 8928766 protein-coding Fermt3 FERM domain containing kindlin 3 ENCODES a protein that exhibits integrin binding (ortholog); lipid binding (ortholog); INVOLVED IN integrin activation (ortholog); integrin-mediated signaling pathway (ortholog); leukocyte cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); blood platelet disease (ortholog); genetic disease (ortholog); FOUND IN podosome (ortholog) NW_004955422 20854297 20870463 - 102020258 AGCD01023095;GBDF01125226;XM_005384637;XM_013513956 XP_005384694;XP_013369410 MODEL 8965225 protein-coding LOC102009024 pentatricopeptide repeat-containing protein 1, mitochondrial NW_004955460 15091557 15111456 - 102009024 AGCD01048768;GBDI01065355;XM_005397942;XM_005397943 XP_005397999;XP_005398000 MODEL 8991146 protein-coding LOC102020772 granzyme B-like NW_004955409 35665966 35675256 + 102020772 AGCD01010428;GBDF01186080;XM_005376983 XP_005377040 MODEL 9025654 protein-coding Dek DEK proto-oncogene ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of double-strand break repair (ortholog); regulation of double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN contractile muscle fiber (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 28470207 28472083 - 102008065 AGCD01008713;XM_013509494 XP_013364948 MODEL 8861530 protein-coding Htra4 HtrA serine peptidase 4 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog) NW_004955463 14525798 14536948 + 102012072 AGCD01049912;GBCE01122540;GBDK01169288;XM_013521536 XP_013376990 MODEL 39131899 rrna 5S_rRNA 5S ribosomal RNA 9021463 ncrna LOC102020417 uncharacterized LOC102020417 NW_004955407 4599104 4604564 + 102020417 AGCD01006887;XR_259549 MODEL 8790556 protein-coding Kank1 KN motif and ankyrin repeat domains 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell population proliferation (ortholog); cortical microtubule organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955434 5247278 5279043 + 102012236 AGCD01032187;AGCD01032188;GBCB01025517;GBCQ01097797;XM_005388591;XM_005388596 XP_005388648;XP_005388653 MODEL 8846396 pseudo LOC102009388 liver carboxylesterase 2-like NW_004955484 9699400 9714908 - 102009388 AGCD01058425 MODEL 9046382 protein-coding Grk4 G protein-coupled receptor kinase 4 ENCODES a protein that exhibits rhodopsin kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor internalization (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; kinin signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Diabetic Nephropathies (ortholog); essential hypertension (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955514 1837141 1895785 + 102029318 AGCD01067065;AGCD01067066;GBDF01005059;XM_005408752;XM_005408754;XM_005408756;XM_013506761;XR_001231762 XP_005408809;XP_005408811;XP_005408813;XP_013362215 MODEL 8930253 protein-coding Ing4 inhibitor of growth family member 4 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Lymphatic Metastasis (ortholog); prostate cancer (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 4263647 4274476 - 102022903 AGCD01013604;GBDJ01129502;XM_005378800;XM_005378801;XM_005378802;XM_005378803;XM_013511346;XM_013511347;XM_013511348 XP_005378857;XP_005378858;XP_005378859;XP_005378860;XP_013366800;XP_013366801;XP_013366802 MODEL 8992318 ncrna LOC102005756 uncharacterized LOC102005756 NW_004955402 5429973 5443199 - 102005756 AGCD01000135;XR_001236384;XR_259029 MODEL 8766446 pseudo LOC102016292 ribosomal protein S6 kinase alpha-6 pseudogene NW_004955425 3928732 3931783 - 102016292 AGCD01025303 MODEL 8872103 ncrna LOC102009790 uncharacterized LOC102009790 NW_004955403 20132939 20135472 - 102009790 AGCD01002154;GBDJ01243887;XR_259189 MODEL 8972326 pseudo LOC102012149 high mobility group protein B1-like NW_004958114 9 505 + 102012149 AGCD01081510 MODEL 8914888 ncrna LOC102012908 uncharacterized LOC102012908 NW_004955444 12340446 12343731 - 102012908 AGCD01039069;GBDK01125336;XR_262259 MODEL 8785110 ncrna LOC102014036 uncharacterized LOC102014036 NW_004955413 24324493 24370270 + 102014036 AGCD01014360;AGCD01014361;AGCD01014362;GBBH01160502;XR_001232986;XR_001232987;XR_260104 MODEL 8782775 protein-coding LOC102008265 keratin, type II cuticular Hb6 NW_004955547 2650341 2656801 + 102008265 AGCD01072290;AGCD01072291;GBDF01140560;XM_005411939 XP_005411996 MODEL 8786619 protein-coding LOC102021195 zinc finger protein OZF-like NW_004955624 34649 73325 + 102021195 AGCD01077427;AGCD01077428;AGCD01077429;AGCD01077430;AGCD01077431;AGCD01077432;AGCD01077433;XM_005415021 XP_005415078 MODEL 8851020 protein-coding Dcaf6 DDB1 and CUL4 associated factor 6 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); Prostatic Neoplasms (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955462 9036710 9176981 - 102021858 AGCD01049332;AGCD01049333;GBBH01050429;GBCB01004394;XM_013521421 XP_013376875 MODEL 9049718 ncrna LOC102013327 uncharacterized LOC102013327 NW_004955515 1287451 1288282 - 102013327 AGCD01067223;GBDF01052083;XR_264519 MODEL 9057001 protein-coding LOC102011291 cytochrome P450 4A11-like NW_004955464 11487951 11500616 - 102011291 AGCD01050155;GBBH01214209;XM_005398645;XM_005398647 XP_005398702;XP_005398704 MODEL 8999334 protein-coding Epha2 EPH receptor A2 ENCODES a protein that exhibits ephrin receptor activity (ortholog); growth factor binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN axial mesoderm formation (ortholog); blood vessel development (ortholog); blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cataract (ortholog); cataract 6 multiple types (ortholog); disease of cellular proliferation (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); focal adhesion (ortholog) NW_004955527 2120447 2151932 + 102004197 AGCD01069422;AGCD01069423;GBDI01327302;XM_005409845 XP_005409902 MODEL 8846511 pseudo LOC102014434 40S ribosomal protein S2 pseudogene NW_004955466 797566 800573 + 102014434 AGCD01050676 MODEL 8867659 protein-coding LOC102024600 olfactory receptor 4C15-like NW_004955511 234273 235214 + 102024600 AGCD01066325;XM_005408183 XP_005408240 MODEL 8860760 protein-coding LOC102011767 galectin-5-like NW_004955481 5476020 5485385 + 102011767 AGCD01056980;AGCD01056981;GBDF01261565;XM_005402778;XM_005402779 XP_005402835;XP_005402836 MODEL 8852062 pseudo LOC102021905 ATP synthase mitochondrial F1 complex assembly factor 1 pseudogene NW_004955432 3069152 3074952 + 102021905 AGCD01030628 MODEL 8950005 pseudo LOC102010540 Golgi apparatus membrane protein TVP23 homolog B pseudogene NW_004955403 54262808 54264290 + 102010540 AGCD01003090 MODEL 39131755 rrna 5S_rRNA 5S ribosomal RNA 8872212 protein-coding LOC102015541 olfactory receptor 7C2-like NW_004955495 8384024 8384983 - 102015541 AGCD01062204;XM_005406106 XP_005406163 MODEL 8720362 protein-coding Etfrf1 electron transfer flavoprotein regulatory factor 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN negative regulation of oxidative phosphorylation (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 20287287 20294430 + 102029279 AGCD01014212;GBDF01080150;XM_005379098;XM_013511449 XP_005379155;XP_013366903 MODEL 8762046 ncrna LOC102007901 uncharacterized LOC102007901 NW_004955485 9441277 9448021 + 102007901 AGCD01058766;GBDF01017147;XR_263934;XR_263935 MODEL 8999191 protein-coding Abcb10 ATP binding cassette subfamily B member 10 ENCODES a protein that exhibits ABC-type transporter activity (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN erythrocyte development (ortholog); export from the mitochondrion (ortholog); heme biosynthetic process (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955492 8532240 8573211 + 102025917 AGCD01060817;AGCD01060818;AGCD01060819;AGCD01060820;GBBH01076456;XM_005405023 XP_005405080 MODEL 8965455 protein-coding LOC102016298 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like NW_004955430 7397041 7416209 + 102016298 AGCD01029349;AGCD01029350;GBDF01306804;XM_013515604;XR_001234551 XP_013371058 MODEL 8952236 ncrna LOC102015917 uncharacterized LOC102015917 NW_004955452 10492790 10517508 - 102015917 AGCD01044277;AGCD01044278;GBDF01085013;XR_262675 MODEL 9031766 protein-coding LOC102009791 uncharacterized LOC102009791 NW_004955648 46741 47626 - 102009791 AGCD01077769;GBDF01075664;XM_005415051 XP_005415108 MODEL 39133963 misc_rna 7SK 7SK RNA 8933510 ncrna LOC102008623 uncharacterized LOC102008623 NW_004955479 10170741 10180244 - 102008623 AGCD01056526;AGCD01056527;GBDI01103470;XR_263739 MODEL 8919715 ncrna LOC102012909 uncharacterized LOC102012909 NW_004955445 3519216 3530963 + 102012909 AGCD01039396;GBDF01083032;XR_262300 MODEL 8821582 pseudo LOC102021205 CDC42 small effector protein 2-like NW_004955405 14824051 14824304 + 102021205 AGCD01004933 MODEL 8724576 protein-coding Dtx3 deltex E3 ubiquitin ligase 3 INVOLVED IN Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 5328723 5334092 + 102006546 AGCD01047476;GBDI01009417;XM_005397398;XM_005397399 XP_005397455;XP_005397456 MODEL 9032245 protein-coding LOC102009028 uncharacterized LOC102009028 NW_004955411 2334442 2389596 - 102009028 AGCD01011505;AGCD01011506;XM_013510712 XP_013366166 MODEL 8751086 protein-coding Eif6 eukaryotic translation initiation factor 6 ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Neoplasms (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog); lamin filament (ortholog) NW_004956210 226 6819 + 102011720 AGCD01079244;GBBH01031356;XM_005415177 XP_005415234 MODEL 39131900 rrna 5S_rRNA 5S ribosomal RNA 8977057 pseudo LOC102017808 DEP domain-containing protein 1B-like NW_004955434 20258595 20259982 - 102017808 AGCD01032614 MODEL 9013223 protein-coding Kctd19 potassium channel tetramerization domain containing 19 INVOLVED IN male meiotic nuclear division (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN nucleus (ortholog) NW_004955484 9282976 9344882 + 102006915 AGCD01058414;AGCD01058415;GBDF01046564;XM_005403664;XM_013503893;XM_013503894 XP_005403721;XP_013359347;XP_013359348 MODEL 9060518 protein-coding Dlg4 discs large MAGUK scaffold protein 4 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); beta-1 adrenergic receptor binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to potassium ion (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell junction (ortholog); cell periphery (ortholog) NW_004955467 9691733 9715872 + 102028518 AGCD01051521;GBDF01116423;XM_005399548;XM_005399550;XM_005399551;XM_005399553;XM_005399554;XM_005399555;XM_005399556;XM_013522090;XM_013522091;XM_013522092;XM_013522094 XP_005399605;XP_005399607;XP_005399608;XP_005399610;XP_005399611;XP_005399612;XP_005399613;XP_013377544;XP_013377545;XP_013377546;XP_013377548 MODEL 9032890 protein-coding Htt huntingtin ENCODES a protein that exhibits beta-tubulin binding (ortholog); diazepam binding (ortholog); dynactin binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); associative learning (ortholog); PARTICIPATES IN Huntington's disease pathway; ASSOCIATED WITH Cadmium Poisoning (ortholog); cerebral palsy (ortholog); genetic disease (ortholog); FOUND IN autophagosome (ortholog); axon (ortholog); centriole (ortholog) NW_004955514 1906189 2042357 + 102006381 AGCD01067067;AGCD01067068;AGCD01067069;AGCD01067070;AGCD01067071;GBBH01187582;GBCE01064737;XM_013506814;XM_013506815 XP_013362268;XP_013362269 MODEL 8711829 protein-coding Crebrf CREB3 regulatory factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN maternal behavior (ortholog); negative regulation of endoplasmic reticulum unfolded protein response (ortholog); negative regulation of nuclear receptor-mediated glucocorticoid signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955408 25718523 25769551 + 102028501 AGCD01008651;GBDF01224359;XM_005376346;XM_005376347;XM_005376348 XP_005376403;XP_005376404;XP_005376405 MODEL 9057720 protein-coding LOC102005760 phosphatidylinositol-binding clathrin assembly protein-like NW_004955594 504817 535099 - 102005760 AGCD01076429;AGCD01076430;AGCD01076431;AGCD01076432;AGCD01076433;AGCD01076434;GBBH01019273;GBCB01101047;XM_005414676;XM_013510002;XM_013510003 XP_005414733;XP_013365456;XP_013365457 MODEL 10333698 ncrna LOC106150000 uncharacterized LOC106150000 NW_004955460 9840365 9842792 + 106150000 AGCD01048556;XR_001236510 MODEL 8976686 protein-coding LOC102003930 BPI fold-containing family C protein-like NW_004957031 166 1202 - 102003930 AGCD01080427;XM_005415220 XP_005415277 MODEL 8764453 protein-coding Clcn5 chloride voltage-gated channel 5 ENCODES a protein that exhibits identical protein binding (ortholog); voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); endocytosis (ortholog); renal system process (ortholog); ASSOCIATED WITH Bethlem myopathy 1A (ortholog); Dent disease (ortholog); Dent disease 1 (ortholog); FOUND IN apical part of cell (ortholog); endosome (ortholog); Golgi apparatus (ortholog) NW_004955543 1076988 1256352 + 102015983 AGCD01071612;AGCD01071613;AGCD01071614;AGCD01071615;GBBH01191026;XM_005411351;XM_013508169;XM_013508170;XM_013508171 XP_005411408;XP_013363623;XP_013363624;XP_013363625 MODEL 8793820 protein-coding Acox1 acyl-CoA oxidase 1 ENCODES a protein that exhibits acyl-CoA oxidase activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease axonal type 2K (ortholog); Charcot-Marie-Tooth disease recessive intermediate A (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) NW_004955506 6286824 6309764 + 102007679 AGCD01065411;GBCB01041555;GBDF01163252;XM_005407465 XP_005407522 MODEL 9067547 protein-coding Antkmt adenine nucleotide translocase lysine methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine trimethylation (ortholog); FOUND IN mitochondrion (ortholog) NW_004955442 16482450 16484164 - 102014617 AGCD01037901;GBCB01003023;XM_013517756;XM_013517757;XM_013517758 XP_013373210;XP_013373211;XP_013373212 MODEL 8857900 ncrna LOC102020776 uncharacterized LOC102020776 NW_004955410 18783758 18811216 + 102020776 AGCD01011012;AGCD01011013;GBDF01145426;XR_259848 MODEL 8799195 protein-coding LOC102013679 zinc finger protein OZF-like NW_004955656 47449 48378 - 102013679 AGCD01077846;XM_005415058 XP_005415115 MODEL 8918324 protein-coding LOC102014808 adenylate cyclase type 5 NW_004955427 22460766 22596167 - 102014808 AGCD01027468;AGCD01027469;GBBH01127278;GBDF01279478;XM_005386527 XP_005386584 MODEL 8942894 protein-coding Ferry3 FERRY endosomal RAB5 effector complex subunit 3 INVOLVED IN regulation of mast cell degranulation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive intellectual developmental disorder 66 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); protein-containing complex (ortholog) NW_004955413 2298514 2335308 - 102003328 AGCD01013544;GBDK01398152;XM_005378731;XM_013511553 XP_005378788;XP_013367007 MODEL 8923945 protein-coding LOC102011292 translation initiation factor IF-2-like NW_004955411 5098018 5101336 - 102011292 AGCD01011594;GBDF01039872;XM_005377923 XP_005377980 MODEL 8755760 pseudo LOC102020419 protein FAM45A pseudogene NW_004955455 12666202 12672993 + 102020419 AGCD01046047 MODEL 8870123 protein-coding Dele1 DAP3 binding cell death enhancer 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular response to stress (ortholog); DNA damage response (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955415 11851023 11869905 - 102030065 AGCD01016178;GBDK01238175;XM_005380717;XM_013512317;XM_013512318;XM_013512319;XM_013512320 XP_005380774;XP_013367771;XP_013367772;XP_013367773;XP_013367774 MODEL 8828038 protein-coding LOC102009392 60S ribosomal protein L10-like NW_004955491 5944474 5944994 - 102009392 AGCD01060510;XM_005404834 XP_005404891 MODEL 8765011 pseudo LOC102011771 glucose-induced degradation protein 8 homolog pseudogene NW_004955419 29922246 29923728 - 102011771 AGCD01020515 MODEL 8797552 protein-coding Grk5 G protein-coupled receptor kinase 5 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); fat cell differentiation (ortholog); negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH Alzheimer's disease (ortholog); cardiovascular system disease (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN nuclear membrane (ortholog); nuclear speck (ortholog); plasma membrane (ortholog) NW_004955551 43918 255118 + 102008463 AGCD01072649;AGCD01072650;AGCD01072651;GBDF01085529;XM_005412154;XM_005412155 XP_005412211;XP_005412212 MODEL 9008608 protein-coding Ing5 inhibitor of growth family member 5 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of growth (ortholog); FOUND IN histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955542 135634 160991 - 102004642 AGCD01071457;AGCD01071458;AGCD01071459;AGCD01071460;AGCD01071461;GBCQ01093107;XM_005411116;XM_005411118;XM_013508089;XM_013508090;XM_013508091;XM_013508092;XM_013508093;XM_013508094;XM_013508095 XP_005411173;XP_005411175;XP_013363543;XP_013363544;XP_013363545;XP_013363546;XP_013363547;XP_013363548;XP_013363549 MODEL 9041803 ncrna LOC102012150 uncharacterized LOC102012150 NW_004955403 54885558 54890045 - 102012150 AGCD01003107;GBDF01110602;XR_259275 MODEL 8700684 ncrna LOC102016648 uncharacterized LOC102016648 NW_004955447 7681151 7713953 + 102016648 AGCD01040821;GBDF01223785;XR_262414 MODEL 8857340 protein-coding Igsf1 immunoglobulin superfamily member 1 ENCODES a protein that exhibits activin receptor antagonist activity (ortholog); coreceptor activity (ortholog); inhibin binding (ortholog); INVOLVED IN negative regulation of activin receptor signaling pathway (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); Congenital Nongoitrous Hypothyroidism (ortholog); congenital nongoitrous hypothyroidism 1 (ortholog); FOUND IN membrane (ortholog) NW_004955473 3702471 3715506 + 102030300 AGCD01053935;GBDF01237848;XM_005401222;XM_013523048 XP_005401279;XP_013378502 MODEL 8963835 protein-coding C1ql3 complement C1q like 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); postsynaptic density assembly (ortholog); regulation of synapse organization (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955429 11287486 11296716 + 102030103 AGCD01028686;GBDJ01404596;XM_005386970 XP_005387027 MODEL 9066928 protein-coding LOC102007904 C-C chemokine receptor type 1-like NW_004955420 25908976 25909943 + 102007904 AGCD01021382;XM_013513596 XP_013369050 MODEL 8982321 ncrna LOC102008271 uncharacterized LOC102008271 NW_004955445 2704964 2707871 - 102008271 AGCD01039363;GBCE01111187;XR_262299 MODEL 8794885 protein-coding LOC102019396 ATPase family AAA domain-containing protein 3 NW_004955486 9344108 9360974 - 102019396 AGCD01059177;GBDI01218980;XM_005404214;XM_005404216;XM_005404218 XP_005404271;XP_005404273;XP_005404275 MODEL 39134235 misc_rna 7SK 7SK RNA 8955310 pseudo LOC102016300 olfactory receptor 8H1-like NW_004955511 5052990 5060089 + 102016300 AGCD01066545;AGCD01066546 MODEL 10097637 protein-coding LOC106150001 cytohesin-3 NW_004955460 10842860 10843809 - 106150001 AGCD01048619;GBDK01183147;XM_013521143 XP_013376597 MODEL 9066009 protein-coding Kank2 KN motif and ankyrin repeat domains 2 INVOLVED IN kidney epithelium development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); nephrotic syndrome type 16 (ortholog); palmoplantar keratoderma and woolly hair (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955495 2168992 2173581 - 102017468 AGCD01061749;AGCD01061750;GBDF01040871;XM_005405644;XM_013505179 XP_005405701;XP_013360633 MODEL 8787737 ncrna LOC102008635 uncharacterized LOC102008635 NW_004955493 5964146 5970478 + 102008635 AGCD01061081;GBBH01168010;XR_264086 MODEL 8750247 protein-coding Ctnnb1 catenin beta 1 ENCODES a protein that exhibits alpha-catenin binding (ortholog); cadherin binding (ortholog); chromatin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); adherens junction organization (ortholog); angiogenesis (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; E-cadherin signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) NW_004955420 29030716 29047447 - 102007777 AGCD01021492;GBCB01005191;GBCE01051940;XM_005383567 XP_005383624 MODEL 8769186 protein-coding CUNH4orf36 chromosome unknown C4orf36 homolog NW_004955474 2934400 2939999 + 102018385 AGCD01054314;GBDF01089496;XM_005401343 XP_005401400 MODEL 8833960 pseudo LOC102017809 LIM/homeobox protein Lhx2 pseudogene NW_004955529 937279 938433 + 102017809 AGCD01069660 MODEL 8910633 protein-coding Eipr1 EARP complex and GARP complex interacting protein 1 INVOLVED IN endocytic recycling (ortholog); positive regulation of endocytic recycling (ortholog); positive regulation of retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN EARP complex (ortholog); GARP complex (ortholog); nucleolus (ortholog) NW_004955487 3865469 3959750 + 102018608 AGCD01059295;AGCD01059296;AGCD01059297;GBDF01086957;XM_005404376 XP_005404433 MODEL 8849982 ncrna LOC102015542 uncharacterized LOC102015542 NW_004955497 2576338 2582975 - 102015542 AGCD01062511;GBDF01160791;XR_001231429 MODEL 8879592 protein-coding LOC102014040 olfactory receptor 2D2 NW_004955414 22804933 22805880 - 102014040 AGCD01015478;XM_005380513 XP_005380570 MODEL 8780614 protein-coding Kctd2 potassium channel tetramerization domain containing 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog) NW_004955553 1899533 1918534 + 102005086 AGCD01072904;AGCD01072905;GBCE01098286;GBDF01087330;XM_013508657 XP_013364111 MODEL 8830067 protein-coding Dlg5 discs large MAGUK scaffold protein 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN apical protein localization (ortholog); epithelial to mesenchymal transition (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH YUKSEL-VOGEL-BAUER SYNDROME (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); ciliary basal body (ortholog) NW_004955437 14510488 14628768 + 102021484 AGCD01034676;AGCD01034677;AGCD01034678;GBBH01115032;GBDF01192616;XM_005389900;XM_005389902 XP_005389957;XP_005389959 MODEL 8780648 protein-coding LOC102005763 tetratricopeptide repeat protein 30B NW_004955403 19246934 19250365 + 102005763 AGCD01002121;GBDF01044632;XM_005373400 XP_005373457 MODEL 8883561 protein-coding Abcb11 ATP binding cassette subfamily B member 11 ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); bile acid transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid metabolic process (ortholog); canalicular bile acid transport (ortholog); PARTICIPATES IN statin pharmacokinetics pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); benign recurrent intrahepatic cholestasis 2 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955449 5412958 5511629 + 102003503 AGCD01041932;AGCD01041933;AGCD01041934;AGCD01041935;AGCD01041936;AGCD01041937;AGCD01041938;AGCD01041939;GBBH01010252;XM_005393267;XM_005393268;XM_013518807;XM_013518809 XP_005393324;XP_005393325;XP_013374261;XP_013374263 MODEL 8824766 pseudo LOC102014439 U3 small nucleolar ribonucleoprotein protein MPP10 pseudogene NW_004955413 2176535 2177903 - 102014439 AGCD01013542 MODEL 9067826 pseudo LOC102024609 zinc finger protein 277 pseudogene NW_004955525 3961128 3986485 + 102024609 AGCD01069164;AGCD01069165 MODEL 39134236 misc_rna 7SK 7SK RNA 8966850 protein-coding Epha3 EPH receptor A3 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN cell migration (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH atrial fibrillation (ortholog); Fever (ortholog); pancreatic cancer (ortholog); FOUND IN early endosome (ortholog); GABA-ergic synapse (ortholog); plasma membrane (ortholog) NW_004955407 4135671 4500900 - 102019666 AGCD01006872;AGCD01006873;AGCD01006874;AGCD01006875;AGCD01006876;AGCD01006877;AGCD01006878;AGCD01006879;AGCD01006880;AGCD01006881;GBBH01045871;XM_005375517;XM_005375518 XP_005375574;XP_005375575 MODEL 8956589 protein-coding LOC102012915 uncharacterized LOC102012915 NW_004955450 14986194 14993012 + 102012915 AGCD01042775;GBDF01058226;XM_013518836 XP_013374290 MODEL 8906405 protein-coding Dtx3l deltex E3 ubiquitin ligase 3L ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); histone binding (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955427 21806170 21812701 + 102011223 AGCD01027459;GBCE01170484;XM_005386514 XP_005386571 MODEL 9066979 pseudo LOC102014810 phosphoserine aminotransferase pseudogene NW_004955507 5245238 5246310 + 102014810 AGCD01065668 MODEL 8851566 protein-coding LOC102010542 toll-like receptor 12 NW_004955452 11635179 11638291 + 102010542 AGCD01044342;GBDK01385301;XM_013519712 XP_013375166 MODEL 8864798 protein-coding LOC102009030 olfactory receptor 8B12-like NW_004955412 25540272 25542114 - 102009030 AGCD01013160;GBDI01315433;XM_005378423 XP_005378480 MODEL 8991802 pseudo LOC102020421 homeobox-containing protein 1 pseudogene NW_004955407 38284115 38332185 - 102020421 AGCD01007803;AGCD01007804 MODEL 9021380 protein-coding LOC102016302 multidrug resistance protein 1-like NW_004955432 4797562 4881240 - 102016302 AGCD01030745;GBDJ01142870;GBDJ01181385;XM_013516023 XP_013371477 MODEL 8709250 ncrna LOC102009395 uncharacterized LOC102009395 NW_004955422 28736276 28739914 + 102009395 AGCD01023368;GBDF01220110;XR_260928 MODEL 8974604 protein-coding Dennd10 DENN domain containing 10 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosome transport via multivesicular body sorting pathway (ortholog); protein transport (ortholog); regulation of early endosome to late endosome transport (ortholog); FOUND IN late endosome (ortholog) NW_004955431 23601338 23623852 + 102006380 AGCD01030543;AGCD01030544;AGCD01030545;GBDF01154405;XM_005387885;XM_013515881 XP_005387942;XP_013371335 MODEL 9050556 protein-coding Ethe1 ETHE1 persulfide dioxygenase ENCODES a protein that exhibits identical protein binding (ortholog); iron ion binding (ortholog); sulfur dioxygenase activity (ortholog); INVOLVED IN glutathione metabolic process (ortholog); hydrogen sulfide metabolic process (ortholog); ASSOCIATED WITH ethylmalonic encephalopathy (ortholog); genetic disease (ortholog); Nervous System Malformations (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955555 1262860 1279714 - 102016105 AGCD01073068;AGCD01073069;GBDJ01127270;XM_005412440 XP_005412497 MODEL 8842154 pseudo LOC102003933 pannexin-1 pseudogene NW_004955451 1471730 1473218 + 102003933 AGCD01042971 MODEL 8857758 pseudo LOC102015923 homeobox protein Meis2 pseudogene NW_004955407 24891666 24892871 + 102015923 AGCD01007485;XR_259579 MODEL 8906377 pseudo LOC102009792 MAP/microtubule affinity-regulating kinase 3-like NW_004955403 31079581 31081821 + 102009792 AGCD01002411 MODEL 8736586 protein-coding Crebzf CREB/ATF bZIP transcription factor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression, epigenetic (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) NW_004955414 7190234 7213042 + 102021751 AGCD01014949;AGCD01014950;AGCD01014951;GBBH01118420;GBDF01119057;XM_005379784;XM_013511854;XM_013511855;XM_013511856 XP_005379841;XP_013367308;XP_013367309;XP_013367310 MODEL 8725545 pseudo LOC102013333 prefoldin subunit 4-like NW_004955530 2262235 2268611 + 102013333 AGCD01069911 MODEL 8873443 protein-coding Inha inhibin subunit alpha ENCODES a protein that exhibits inhibin binding (ortholog); protein sequestering activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN hemoglobin biosynthetic process (ortholog); male gonad development (ortholog); negative regulation of activin receptor signaling pathway (ortholog); ASSOCIATED WITH dysgerminoma (ortholog); embryonal carcinoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN extracellular space (ortholog); inhibin A complex (ortholog); inhibin B complex (ortholog) NW_004955453 13902443 13905008 - 102030150 AGCD01044854;GBDJ01080673;XM_005395512 XP_005395569 MODEL 8995849 protein-coding LOC102016649 RNA-binding protein Nova-2 NW_004955574 361946 386052 - 102016649 AGCD01075102;AGCD01075103;GBDF01156089;GBDK01025053;XM_013509571 XP_013365025 MODEL 9010718 protein-coding C1qtnf1 C1q and TNF related 1 ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of platelet activation (ortholog); negative regulation of platelet aggregation (ortholog); positive regulation of aldosterone secretion (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) NW_004955506 3680352 3700729 - 102026658 AGCD01065318;AGCD01065319;GBBH01050432;XM_005407346;XM_005407347;XM_013506098 XP_005407403;XP_005407404;XP_013361552 MODEL 8806398 protein-coding Acox2 acyl-CoA oxidase 2 ENCODES a protein that exhibits 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity (ortholog); fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH congenital bile acid synthesis defect 6 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN peroxisome (ortholog) NW_004955430 1638931 1665308 + 102006263 AGCD01029130;GBDJ01052486;XM_005387286 XP_005387343 MODEL 8889145 ncrna LOC102020777 uncharacterized LOC102020777 NW_004955410 26452943 26471154 + 102020777 AGCD01011193;GBDF01235780;XR_259868 MODEL 8882210 protein-coding LOC102021207 testis-specific serine/threonine-protein kinase 1-like NW_004955406 11748669 11750078 + 102021207 AGCD01005895;GBDF01003285;XM_005374829 XP_005374886 MODEL 9022861 pseudo LOC102013685 alpha-endosulfine pseudogene NW_004955405 26387436 26387776 - 102013685 AGCD01005201 MODEL 9049614 protein-coding Kctd20 potassium channel tetramerization domain containing 20 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of phosphorylation (ortholog); FOUND IN cytoplasm (ortholog) NW_004955437 4127823 4141108 + 102010519 AGCD01034362;GBCQ01096384;XM_013516917 XP_013372371 MODEL 8982027 ncrna LOC102021906 uncharacterized LOC102021906 NW_004955433 3118317 3132395 - 102021906 AGCD01031413;AGCD01031414;GBCB01121567;XR_261550 MODEL 39131902 rrna 5S_rRNA 5S ribosomal RNA 10062672 ncrna LOC106150002 uncharacterized LOC106150002 NW_004955460 8243549 8250894 - 106150002 AGCD01048513;XR_001236512 MODEL 39134238 misc_rna 7SK 7SK RNA 8971245 protein-coding Dcaf7 DDB1 and CUL4 associated factor 7 ASSOCIATED WITH Craniofacial Abnormalities (ortholog); myeloid leukemia associated with Down Syndrome (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog); nuclear matrix (ortholog) NW_004955478 8213679 8241214 - 102025574 AGCD01056015;AGCD01056016;GBDI01009756;XM_005402206;XR_263709 XP_005402263 MODEL 8832315 ncrna LOC102012151 uncharacterized LOC102012151 NW_004955452 12802984 12851810 - 102012151 AGCD01044366;AGCD01044367;GBDF01073900;XR_001236023;XR_001236024 MODEL 39133964 misc_rna 7SK 7SK RNA 8889555 protein-coding CUNH4orf54 chromosome unknown C4orf54 homolog NW_004955496 7933953 7949207 + 102003464 AGCD01062387;GBCB01021934;XM_005406288 XP_005406345 MODEL 8831302 pseudo LOC102008273 cytochrome c, somatic pseudogene NW_004955446 3719779 3720140 - 102008273 AGCD01040028 MODEL 8771381 pseudo LOC102007906 vomeronasal type-1 receptor 48-like NW_004955421 21878638 21880909 - 102007906 AGCD01022124;XM_005383931 MODEL 8746054 protein-coding Clcn6 chloride voltage-gated channel 6 ENCODES a protein that exhibits voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Developmental Disabilities (ortholog); neuronal ceroid lipofuscinosis 15 (ortholog) NW_004955486 2066317 2096317 - 102005713 AGCD01058987;AGCD01058988;GBBH01208092;XM_005403984;XM_005403986;XM_013504261 XP_005404041;XP_005404043;XP_013359715 MODEL 8863341 protein-coding Antxr1 ANTXR cell adhesion molecule 1 ENCODES a protein that exhibits actin filament binding (ortholog); collagen binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel development (ortholog); negative regulation of extracellular matrix assembly (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); breast cancer (ortholog); colorectal cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); filopodium membrane (ortholog) NW_004955424 15820734 16034278 - 102017139 AGCD01024730;AGCD01024731;AGCD01024732;AGCD01024733;AGCD01024734;AGCD01024735;AGCD01024736;GBBH01227748;GBCE01074216;XM_013514693 XP_013370147 MODEL 9010191 protein-coding Igsf10 immunoglobulin superfamily member 10 INVOLVED IN ossification (ortholog); regulation of neuron migration (ortholog); tissue regeneration (ortholog); ASSOCIATED WITH Martsolf syndrome 1 (ortholog); Primary Ovarian Failure (ortholog); primary ovarian insufficiency (ortholog); FOUND IN extracellular region (ortholog) NW_004955448 2532973 2557650 - 102004340 AGCD01041283;GBDK01308425;XM_005393032;XM_005393033;XM_013518617 XP_005393089;XP_005393090;XP_013374071 MODEL 8873474 protein-coding Fes FES proto-oncogene, tyrosine kinase ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); microtubule binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); cellular response to vitamin D (ortholog); centrosome cycle (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH coronary artery disease (ortholog); esophagus squamous cell carcinoma (ortholog); female breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955416 14948121 14959035 + 102016590 AGCD01017292;GBDJ01008856;XM_005381509;XM_005381510;XM_013512503 XP_005381566;XP_005381567;XP_013367957 MODEL 39131756 rrna 5S_rRNA 5S ribosomal RNA 8782097 ncrna LOC102011776 uncharacterized LOC102011776 NW_004955421 24690889 24718021 + 102011776 AGCD01022221;GBDF01281561;XR_260824 MODEL 8836892 protein-coding Kank3 KN motif and ankyrin repeat domains 3 ASSOCIATED WITH COVID-19 (ortholog) NW_004955563 1056084 1073391 + 102013980 AGCD01074108;AGCD01074109;AGCD01074110;AGCD01074111;GBBH01114838;GBDK01022992;XM_013509152 XP_013364606 MODEL 9020004 protein-coding Hunk hormonally up-regulated Neu-associated kinase ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog) NW_004955407 31439045 31555542 + 102015287 AGCD01007649;AGCD01007650;AGCD01007651;AGCD01007652;AGCD01007653;AGCD01007654;GBCE01063923;XM_013504110 XP_013359564 MODEL 10220772 pseudo LOC102011300 Ig heavy chain V-I region 5-like NW_004955470 472783 473374 - 102011300 AGCD01052614 MODEL 8949910 protein-coding Acox3 acyl-CoA oxidase 3, pristanoyl ENCODES a protein that exhibits fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); long-chain fatty acyl-CoA oxidase activity (ortholog); INVOLVED IN fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN peroxisome (ortholog) NW_004955514 2653502 2690452 + 102007262 AGCD01067085;GBDF01017532;XM_005408770;XM_005408774;XM_013506788;XM_013506789;XM_013506790;XM_013506791;XM_013506792;XM_013506793;XR_001231764;XR_001231765 XP_005408827;XP_005408831;XP_013362242;XP_013362243;XP_013362244;XP_013362245;XP_013362246;XP_013362247 MODEL 10277319 ncrna LOC106150003 uncharacterized LOC106150003 NW_004955460 8104434 8107046 + 106150003 AGCD01048512;XR_001236513 MODEL 8869054 protein-coding LOC102021907 putative uncharacterized protein C3orf49 NW_004955517 2046893 2064789 - 102021907 AGCD01067615;GBBH01155474;XM_013506936;XM_013506937 XP_013362390;XP_013362391 MODEL 8829406 protein-coding Grk6 G protein-coupled receptor kinase 6 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); G protein-coupled receptor kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); desensitization of G protein-coupled receptor signaling pathway (ortholog); negative regulation of anion channel activity (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; corticotropin-releasing hormone signaling pathway; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Drug-Induced Dyskinesia (ortholog); opiate dependence (ortholog) NW_004955408 29665534 29684225 + 102026506 AGCD01008766;GBCQ01032375;GBDI01171906;XM_013509839 XP_013365293 MODEL 9012026 ncrna LOC102020424 uncharacterized LOC102020424 NW_004955408 24109963 24111698 - 102020424 AGCD01008594;GBDF01187517;XR_001232410 MODEL 8709932 ncrna LOC102014811 uncharacterized LOC102014811 NW_004955429 21319251 21321579 + 102014811 AGCD01029000;GBDF01176350;XR_261372 MODEL 8960538 protein-coding Dtx4 deltex E3 ubiquitin ligase 4 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of innate immune response (ortholog); proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955511 3758631 3782560 + 102009204 AGCD01066476;GBDJ01419868;GBDJ01419870;XM_005408058 XP_005408115 MODEL 8782854 ncrna LOC102014043 uncharacterized LOC102014043 NW_004955416 14532238 14541580 + 102014043 AGCD01017276;GBDK01284550;XR_260383 MODEL 8883495 pseudo LOC102015546 heterogeneous nuclear ribonucleoprotein A3-like NW_004955502 7680400 7683778 - 102015546 AGCD01064457 MODEL 9007979 ncrna LOC102019398 uncharacterized LOC102019398 NW_004955489 1974116 1979078 + 102019398 AGCD01059856;GBDF01111748;XR_264014;XR_264015 MODEL 8728259 protein-coding LOC102009793 uncharacterized LOC102009793 NW_004955451 10468343 10479347 + 102009793 AGCD01043324;XM_013519062 XP_013374516 MODEL 9053556 pseudo LOC102015924 pre-mRNA-splicing factor SPF27 pseudogene NW_004955455 8675269 8676207 + 102015924 AGCD01045904 MODEL 8790610 protein-coding Dlgap1 DLG associated protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN aggresome assembly (ortholog); modulation of chemical synaptic transmission (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density, intracellular component (ortholog) NW_004955402 6809126 7105356 + 102012591 AGCD01000162;AGCD01000163;AGCD01000164;AGCD01000165;GBBH01181793;XM_005372643;XM_005372644;XM_005372645;XM_005372646;XM_005372647;XM_013517746;XM_013517781;XM_013517823 XP_005372700;XP_005372701;XP_005372702;XP_005372703;XP_005372704;XP_013373200;XP_013373235;XP_013373277 MODEL 8764447 ncrna LOC102014444 uncharacterized LOC102014444 NW_004955471 11422360 11507766 + 102014444 AGCD01053253;AGCD01053254;AGCD01053255;GBCQ01130849;XR_001237061 MODEL 8788331 ncrna LOC102005769 uncharacterized LOC102005769 NW_004955405 37792705 37803781 - 102005769 AGCD01005459;AGCD01005460;GBBH01012524;XR_259443 MODEL 8957674 pseudo LOC102024612 afadin- and alpha-actinin-binding protein pseudogene NW_004955543 1710564 1712276 - 102024612 AGCD01071628 MODEL 8876868 protein-coding C1qtnf12 C1q and TNF related 12 ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN negative regulation of gluconeogenesis (ortholog); negative regulation of inflammatory response (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955486 9541466 9545231 + 102028093 AGCD01059190;GBDF01279918;XM_005404246 XP_005404303 MODEL 8714257 protein-coding LOC102020778 low affinity immunoglobulin gamma Fc region receptor III-B-like NW_004955462 14705877 14711037 + 102020778 AGCD01049456;GBDF01001028;XM_005398304;XM_013521431 XP_005398361;XP_013376885 MODEL 8895723 ncrna LOC102013686 uncharacterized LOC102013686 NW_004955405 33571418 33600240 + 102013686 AGCD01005360;GBDF01238801;XR_259425;XR_259426 MODEL 39131903 rrna 5S_rRNA 5S ribosomal RNA 8917169 protein-coding Epha4 EPH receptor A4 ENCODES a protein that exhibits DH domain binding (ortholog); ephrin receptor activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN adherens junction organization (ortholog); adult walking behavior (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); axonal growth cone (ortholog) NW_004955453 12099800 12240199 + 102026827 AGCD01044828;AGCD01044829;GBBH01055701;XM_005395504 XP_005395561 MODEL 8745048 ncrna LOC102017810 uncharacterized LOC102017810 NW_004955436 21304021 21311466 + 102017810 AGCD01034051;GBBH01051674;XR_261805 MODEL 8857548 pseudo LOC102009396 kinesin-associated protein 3 pseudogene NW_004955422 9676287 9678648 + 102009396 AGCD01022717 MODEL 8980722 protein-coding Dennd11 DENN domain containing 11 NW_004955494 1868793 1921919 + 102007028 AGCD01061424;AGCD01061425;AGCD01061426;AGCD01061427;AGCD01061428;AGCD01061429;GBBH01156369;XM_013504920 XP_013360374 MODEL 8983616 ncrna LOC102003935 uncharacterized LOC102003935 NW_004955405 35086 71659 - 102003935 AGCD01004552;GBBH01007880;XR_259346 MODEL 8856531 protein-coding Acoxl acyl-CoA oxidase like ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN cytosol (ortholog) NW_004955470 2788249 3077277 - 102025234 AGCD01052682;AGCD01052683;AGCD01052684;AGCD01052685;AGCD01052686;AGCD01052687;AGCD01052688;AGCD01052689;GBDK01050330;XM_013522692 XP_013378146 MODEL 8902361 ncrna LOC102013334 uncharacterized LOC102013334 NW_004955437 4653031 4657091 + 102013334 AGCD01034368;GBDF01122062;XR_261851 MODEL 8706926 protein-coding Creg1 cellular repressor of E1A stimulated genes 1 ENCODES a protein that exhibits insulin-like growth factor receptor binding (ortholog); INVOLVED IN autophagy (ortholog); endocytosis (ortholog); lysosomal lumen acidification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); diastolic heart failure (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endosome (ortholog); extracellular space (ortholog); lysosome (ortholog) NW_004955462 9440019 9451875 + 102023447 AGCD01049338;GBBH01032942;XM_005398225;XM_005398226 XP_005398282;XP_005398283 MODEL 8896221 protein-coding Abcb5 ATP binding cassette subfamily B member 5 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); INVOLVED IN eye development (ortholog); regulation of membrane potential (ortholog); transmembrane transport (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 23283263 23379000 + 102003951 AGCD01011097;AGCD01011098;AGCD01011099;GBDJ01161751;XM_005377366 XP_005377423 MODEL 9052895 protein-coding Inhba inhibin subunit beta A ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); androgen metabolic process (ortholog); androst-4-ene-3,17-dione biosynthetic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Brain Hypoxia-Ischemia (ortholog); congestive heart failure (ortholog); FOUND IN activin A complex (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955460 2054879 2066628 + 102015383 AGCD01048386;GBDJ01189469;XM_005397723 XP_005397780 MODEL 8903392 protein-coding LOC102008637 C-type lectin domain family 2 member L NW_004955494 3562862 3573552 - 102008637 AGCD01061476;AGCD01061477;GBCE01072603;GBCQ01101254;XM_013504909 XP_013360363 MODEL 39131389 protein-coding CTNNBIP1 catenin beta interacting protein 1 8929279 pseudo LOC102010543 ferritin light chain pseudogene NW_004955405 19953476 19961761 - 102010543 AGCD01005050 MODEL 8791764 ncrna LOC102009031 uncharacterized LOC102009031 NW_004955413 3100551 3144356 - 102009031 AGCD01013567;AGCD01013568;GBBH01229827;XR_001233023;XR_001233024;XR_001233025;XR_001233026;XR_001233027 MODEL 8798081 protein-coding Fetub fetuin B ENCODES a protein that exhibits metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of endopeptidase activity (ortholog); single fertilization (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog) NW_004955420 21041419 21054043 - 102003141 AGCD01021120;AGCD01021121;GBBH01166494;XM_005383270;XM_005383271;XM_005383272;XM_005383273 XP_005383327;XP_005383328;XP_005383329;XP_005383330 MODEL 9049274 protein-coding LOC102016305 vomeronasal type-2 receptor 116-like NW_004955524 4386049 4405870 - 102016305 AGCD01068971;XM_005409718 XP_005409775 MODEL 8972683 protein-coding Elac1 elaC ribonuclease Z 1 ENCODES a protein that exhibits tRNA-specific ribonuclease activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); tRNA 3'-end processing (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955402 35904552 35918120 + 102021502 AGCD01000908;GBDK01193175;XM_005372936;XM_005372938;XM_005372939 XP_005372993;XP_005372995;XP_005372996 MODEL 39134239 misc_rna 7SK 7SK RNA 8830654 protein-coding LOC102011301 olfactory receptor 56B1-like NW_004955414 21711391 21712350 + 102011301 AGCD01015429;XM_005380104 XP_005380161 MODEL 8822495 protein-coding Hus1 HUS1 checkpoint clamp component INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); FOUND IN checkpoint clamp complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955456 5465180 5476380 + 102008597 AGCD01046330;GBCQ01154034;GBCQ01154045;XM_005396631 XP_005396688 MODEL 8892238 protein-coding Dcaf8 DDB1 and CUL4 associated factor 8 INVOLVED IN myotube cell development (ortholog); single fertilization (ortholog); ASSOCIATED WITH giant axonal neuropathy 2 (ortholog); neurofibromatosis 1 (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955468 11991779 12037541 - 102015828 AGCD01052140;GBDK01131808;XM_005400200;XM_005400201;XM_005400202;XM_013522419 XP_005400257;XP_005400258;XP_005400259;XP_013377873 MODEL 8826006 protein-coding LOC102016656 uncharacterized LOC102016656 NW_004955403 3477509 3505071 + 102016656 AGCD01001766;AGCD01001767;GBDF01282412;XM_013514718 XP_013370172 MODEL 8746501 pseudo LOC102020426 zinc finger and BTB domain-containing protein 44 pseudogene NW_004955408 11084995 11106336 + 102020426 AGCD01008290;AGCD01008291;AGCD01008292;AGCD01008293 MODEL 39133965 misc_rna 7SK 7SK RNA 8891262 protein-coding LOC102008274 cytochrome P450 3A17-like NW_004955573 1579916 1582530 - 102008274 AGCD01075071;AGCD01075072;GBDI01160800;GBDK01284967;XM_013509483 XP_013364937 MODEL 8705148 pseudo LOC102015547 26S proteasome non-ATPase regulatory subunit 10-like NW_004955503 7733146 7733943 - 102015547 AGCD01064799 MODEL 8887156 protein-coding LOC102014046 cytochrome c oxidase subunit 6C FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955417 15230562 15241610 - 102014046 AGCD01018224;AGCD01018225;GBDK01016142;XM_005381859 XP_005381916 MODEL 8754825 ncrna LOC102007907 uncharacterized LOC102007907 NW_004955491 1073965 1082901 - 102007907 AGCD01060347;GBCB01024533;XR_264032 MODEL 8922542 protein-coding LOC102012916 tripartite motif-containing protein 60 NW_004955403 40239714 40250397 - 102012916 AGCD01002675;AGCD01002676;GBDF01161849;XM_005373589;XM_013515246;XM_013515248 XP_005373646;XP_013370700;XP_013370702 MODEL 39131757 rrna 5S_rRNA 5S ribosomal RNA 8987810 protein-coding LOC102021211 olfactory receptor 6C3-like NW_004955458 2762135 2763079 + 102021211 AGCD01047243;XM_005397501 XP_005397558 MODEL 8962295 protein-coding Antxr2 ANTXR cell adhesion molecule 2 INVOLVED IN collagen fibril organization (ortholog); single fertilization (ortholog); uterus development (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); anthrax disease (ortholog); congenital myopathy 1A (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955433 4212729 4345611 - 102024717 AGCD01031456;AGCD01031457;AGCD01031458;AGCD01031459;AGCD01031460;AGCD01031461;GBCE01137016;GBDJ01080911;XM_005388217 XP_005388274 MODEL 8714133 protein-coding LOC102015927 olfactory receptor 6C68 NW_004955458 2895155 2896093 + 102015927 AGCD01047255;XM_005397246 XP_005397303 MODEL 8710293 protein-coding Creg2 cellular repressor of E1A stimulated genes 2 FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955470 7094483 7115792 - 102029500 AGCD01052791;GBBH01023857;GBDJ01041433;XM_013522681 XP_013378135 MODEL 9009813 ncrna LOC102013687 uncharacterized LOC102013687 NW_004955453 15052596 15057088 + 102013687 AGCD01044881;GBDF01288060;XR_001236182 MODEL 8896051 protein-coding Etnk1 ethanolamine kinase 1 ENCODES a protein that exhibits ethanolamine kinase activity (ortholog); INVOLVED IN phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); teratoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 18036646 18094875 + 102024781 AGCD01014167;GBDF01044052;XM_005379081 XP_005379138 MODEL 8964199 protein-coding Ctnnbl1 catenin beta like 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); somatic diversification of immunoglobulins (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH colorectal cancer (ortholog); immunodeficiency 99 (ortholog); morbid obesity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); Prp19 complex (ortholog) NW_004955445 18809389 18975858 - 102016960 AGCD01039906;AGCD01039907;AGCD01039908;GBBH01188717;XM_005392553;XM_005392554 XP_005392610;XP_005392611 MODEL 8851620 protein-coding Kank4 KN motif and ankyrin repeat domains 4 ASSOCIATED WITH nephrotic syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955423 27328795 27363484 + 102012218 AGCD01024121;AGCD01024122;GBBH01150542;GBDJ01423805;XM_005385340;XM_005385341;XM_005385342 XP_005385397;XP_005385398;XP_005385399 MODEL 8998849 pseudo LOC102012152 UMP-CMP kinase-like NW_004955405 25714441 25715377 + 102012152 AGCD01005179 MODEL 10095788 ncrna LOC106150004 uncharacterized LOC106150004 NW_004955460 13302274 13310360 - 106150004 AGCD01048680;XR_001236518 MODEL 8846316 protein-coding Dtymk deoxythymidylate kinase ENCODES a protein that exhibits ATP binding (ortholog); dTMP kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); dTDP biosynthetic process (ortholog); dTTP biosynthetic process (ortholog); ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); NEURODEGENERATION, CHILDHOOD-ONSET, WITH PROGRESSIVE MICROCEPHALY (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955542 155741 163759 + 102006392 AGCD01071460;AGCD01071461;GBCE01076903;XM_005411121;XM_005411122 XP_005411178;XP_005411179 MODEL 8836685 protein-coding CUNH5orf34 chromosome unknown C5orf34 homolog NW_004955446 18837488 18862396 + 102003916 AGCD01040415;GBDF01195920;XM_005392740;XM_005392741 XP_005392797;XP_005392798 MODEL 8715429 ncrna LOC102009800 uncharacterized LOC102009800 NW_004955407 17251314 17300456 + 102009800 AGCD01007243;AGCD01007244;AGCD01007245;AGCD01007246;GBDF01192314;XR_001231024 MODEL 8872734 protein-coding Kctd21 potassium channel tetramerization domain containing 21 ENCODES a protein that exhibits cullin family protein binding (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); ubiquitin-dependent protein catabolic process (ortholog) NW_004955414 13779193 13798349 + 102005027 AGCD01015119;GBDF01181327;XM_005379818;XM_005379819;XM_013512063 XP_005379875;XP_005379876;XP_013367517 MODEL 8722622 protein-coding LOC102014445 vomeronasal type-1 receptor 90-like NW_004955414 15126436 15130335 + 102014445 AGCD01015178;XM_005380446 XP_005380503 MODEL 8853156 protein-coding Clcn7 chloride voltage-gated channel 7 INVOLVED IN response to pH (ortholog); transepithelial chloride transport (ortholog); ASSOCIATED WITH autosomal dominant osteopetrosis 2 (ortholog); autosomal recessive osteopetrosis 4 (ortholog); connective tissue disease (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955442 15762369 15791635 + 102028022 AGCD01037878;GBDJ01175955;XM_005391549 XP_005391606 MODEL 8836933 protein-coding Dlgap2 DLG associated protein 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955403 57965571 58493946 - 102016338 AGCD01003170;AGCD01003171;AGCD01003172;AGCD01003173;AGCD01003174;AGCD01003175;AGCD01003176;AGCD01003177;AGCD01003178;AGCD01003179;AGCD01003180;AGCD01003181;AGCD01003182;GBDK01415037;XM_005373860;XM_005373861;XM_013515038 XP_005373917;XP_005373918;XP_013370492 MODEL 8766279 pseudo LOC102008641 zinc finger protein OZF-like NW_004955425 1882091 1882998 - 102008641 AGCD01025249 MODEL 8765195 protein-coding Igsf11 immunoglobulin superfamily member 11 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); maintenance of protein location (ortholog); positive regulation of long-term synaptic potentiation (ortholog); FOUND IN cell-cell junction (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955427 18698774 18716669 - 102021994 AGCD01027348;GBDF01007359;GBDJ01318281;XM_013515231 XP_013370685 MODEL 8964912 pseudo LOC102011785 protein BEX3-like NW_004955425 1246748 1250299 + 102011785 AGCD01025219 MODEL 8850588 protein-coding LOC102005770 endothelin-converting enzyme-like 1 NW_004955453 3471402 3489839 + 102005770 AGCD01044659;AGCD01044660;AGCD01044661;GBBH01082477;GBDJ01085717;XM_013519999;XM_013520000 XP_013375453;XP_013375454 MODEL 8955436 protein-coding LOC102020781 serpin B9-like NW_004955465 10319656 10329579 - 102020781 AGCD01050507;GBDJ01011006;XM_005398912 XP_005398969 MODEL 39131904 rrna 5S_rRNA 5S ribosomal RNA 9008066 ncrna LOC102021908 uncharacterized LOC102021908 NW_004955433 9978528 10091601 - 102021908 AGCD01031621;AGCD01031622;AGCD01031623;AGCD01031624;GBDF01128236;XR_001234701;XR_261583 MODEL 8944247 protein-coding C1qtnf2 C1q and TNF related 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); positive regulation of fatty acid oxidation (ortholog); positive regulation of glycogen biosynthetic process (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog) NW_004955408 14219263 14266832 - 102026189 AGCD01008389;AGCD01008390;AGCD01008391;GBDI01008429;XM_005376261;XM_005376262;XM_005376264;XM_013508952;XM_013508968 XP_005376318;XP_005376319;XP_005376321;XP_013364406;XP_013364422 MODEL 8803699 pseudo LOC102017817 ubiquitin-like protein 7 pseudogene NW_004955442 13459192 13461151 + 102017817 AGCD01037774 MODEL 8953769 protein-coding Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits DNA binding (ortholog); histone ubiquitin ligase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); circadian regulation of gene expression (ortholog); negative regulation of mitochondrial fusion (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); blepharophimosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955475 550643 671771 - 102017655 AGCD01054700;AGCD01054701;AGCD01054702;AGCD01054703;AGCD01054704;GBCQ01058546;GBCQ01101761;XM_013502813;XM_013502814;XM_013502815;XM_013502816;XM_013502817;XM_013502819 XP_013358267;XP_013358268;XP_013358269;XP_013358270;XP_013358271;XP_013358273 MODEL 8962064 protein-coding LOC102014812 olfactory receptor 8H1-like NW_004955511 1112046 1112987 + 102014812 AGCD01066358;XM_013506365 XP_013361819 MODEL 8784321 protein-coding Epha5 EPH receptor A5 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH malignant astrocytoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); cell periphery (ortholog) NW_004955447 7066111 7382046 + 102015063 AGCD01040810;AGCD01040811;AGCD01040812;AGCD01040813;AGCD01040814;AGCD01040815;AGCD01040816;AGCD01040817;AGCD01040818;AGCD01040819;GBCQ01016524;XM_005392842;XM_013518577 XP_005392899;XP_013374031 MODEL 8772359 protein-coding LOC102019399 left-right determination factor 1-like NW_004955489 156460 160630 - 102019399 AGCD01059780;AGCD01059781;GBDJ01029000;GBDJ01388107;XM_013504465 XP_013359919 MODEL 8822883 protein-coding Elac2 elaC ribonuclease Z 2 ENCODES a protein that exhibits tRNA-specific ribonuclease activity (ortholog); INVOLVED IN mitochondrial tRNA 3'-end processing (ortholog); tRNA 3'-end processing (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency 17 (ortholog); congenital disorder of glycosylation type IIn (ortholog); corticosterone methyloxidase deficiency 1 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955467 4406947 4428769 + 102023131 AGCD01051367;AGCD01051368;GBCQ01066161;XM_005399338;XM_005399342;XM_013522152 XP_005399395;XP_005399399;XP_013377606 MODEL 8917130 protein-coding Dennd1a DENN domain containing 1A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); endocytosis (ortholog); positive regulation of GTPase activity (ortholog); FOUND IN clathrin-coated vesicle (ortholog); clathrin-coated vesicle membrane (ortholog); dendrite (ortholog) NW_004955419 4120095 4605002 + 102026324 AGCD01019754;AGCD01019755;AGCD01019756;AGCD01019757;AGCD01019758;AGCD01019759;AGCD01019760;GBDF01194053;XM_005382503;XM_013513192 XP_005382560;XP_013368646 MODEL 8877982 ncrna LOC102013339 uncharacterized LOC102013339 NW_004955437 18137771 18139577 + 102013339 AGCD01034777;XR_261891 MODEL 8739632 pseudo LOC102016660 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955403 46401545 46402830 - 102016660 AGCD01002856;XM_005373694 MODEL 8981568 protein-coding Acp1 acid phosphatase 1 ENCODES a protein that exhibits acid phosphatase activity (ortholog); phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; riboflavin metabolic pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); conduct disorder (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955487 290434 302405 + 102004285 AGCD01059216;GBDF01083460;XM_005404332;XM_005404333;XM_013504379 XP_005404389;XP_005404390;XP_013359833 MODEL 8844424 ncrna LOC102024614 uncharacterized LOC102024614 NW_004955439 15058548 15077326 + 102024614 AGCD01035998;AGCD01035999;GBDF01042735;XR_261992 MODEL 8974282 protein-coding Abcb6 ATP binding cassette subfamily B member 6 (LAN blood group) ENCODES a protein that exhibits ABC-type heme transporter activity (ortholog); ABC-type transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN brain development (ortholog); cellular detoxification of cadmium ion (ortholog); heme B biosynthetic process (ortholog); ASSOCIATED WITH acute intermittent porphyria (ortholog); acute porphyria (ortholog); coloboma (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955453 14215104 14222338 + 102019355 AGCD01044859;GBDF01049213;XM_005395577;XM_013519849 XP_005395634;XP_013375303 MODEL 8922235 protein-coding LOC102012918 atherin-like NW_004955452 3351568 3354575 - 102012918 AGCD01043921;GBDF01123090;XM_005394752;XM_013519519 XP_005394809;XP_013374973 MODEL 9025655 protein-coding Inhbb inhibin subunit beta B ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); cellular response to calcium ion (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH Brain Death (ortholog); congenital hypothyroidism (ortholog); familial male-limited precocious puberty (ortholog); FOUND IN cell periphery (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955459 9482998 9488489 - 102008066 AGCD01048158;GBCE01049899;GBDK01360992;XM_013521093 XP_013376547 MODEL 39131758 rrna 5S_rRNA 5S ribosomal RNA 9017723 ncrna LOC102015931 uncharacterized LOC102015931 NW_004955409 36421675 36465609 + 102015931 AGCD01010459;AGCD01010460;AGCD01010461;AGCD01010462;GBCQ01158580;XR_259807 MODEL 8784783 protein-coding Grk7 G protein-coupled receptor kinase 7 ENCODES a protein that exhibits rhodopsin kinase activity (ortholog); PARTICIPATES IN visual phototransduction pathway NW_004955508 3937132 3982216 - 102029097 AGCD01065850;AGCD01065851;AGCD01065852;AGCD01065853;GBDF01224465;GBDF01224467;XM_013506246 XP_013361700 MODEL 8748199 protein-coding LOC102009035 uncharacterized LOC102009035 NW_004955413 33713020 33714649 + 102009035 AGCD01014688;GBDI01173861;XM_013511547;XM_013511548 XP_013367001;XP_013367002 MODEL 8740493 ncrna LOC102016306 uncharacterized LOC102016306 NW_004955436 2556498 2593946 + 102016306 AGCD01033611;GBDF01014447;XR_001234922;XR_001234923;XR_261747 MODEL 9035358 protein-coding Fev FEV transcription factor, ETS family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN maternal behavior (ortholog); neuron fate specification (ortholog); neuron maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cerebrotendinous xanthomatosis (ortholog); Myocardial Ischemia (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955453 14449352 14453145 + 102013582 AGCD01044864;AGCD01044865;XM_005395719 XP_005395776 MODEL 9016772 protein-coding Cldn1 claudin 1 ENCODES a protein that exhibits identical protein binding (ortholog); virus receptor activity (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); calcium-independent cell-cell adhesion (ortholog); cell junction maintenance (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); atopic dermatitis (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955420 17798974 17815049 + 102016058 AGCD01021031;GBCE01004289;GBDI01009318;XM_005383227 XP_005383284 MODEL 9019262 ncrna LOC102003942 uncharacterized LOC102003942 NW_004955406 42823741 42853661 + 102003942 AGCD01006719;GBDI01207600;XR_259536;XR_259537 MODEL 8777635 pseudo LOC102011308 protein slowmo homolog 2 pseudogene NW_004955415 30282254 30283847 + 102011308 AGCD01016660 MODEL 8785651 protein-coding LOC102008275 olfactory receptor 2B6-like NW_004955576 1201716 1202654 - 102008275 AGCD01075364;XM_005413943 XP_005414000 MODEL 8775139 protein-coding Kansl1 KAT8 regulatory NSL complex subunit 1 INVOLVED IN regulation of mitochondrial transcription (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Chromosome 17 Deletion (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN histone acetyltransferase complex (ortholog); mitochondrion (ortholog); MLL1 complex (ortholog) NW_004955478 10039687 10221170 + 102012645 AGCD01056117;AGCD01056118;AGCD01056119;AGCD01056120;AGCD01056121;AGCD01056122;AGCD01056123;AGCD01056124;AGCD01056125;GBDF01118701;XM_005402256;XM_005402258 XP_005402313;XP_005402315 MODEL 8832920 protein-coding CUNH5orf46 chromosome unknown C5orf46 homolog ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) NW_004955415 6312822 6317652 + 102010151 AGCD01016014;GBCE01159697;XM_005380651 XP_005380708 MODEL 9023727 protein-coding Dcakd dephospho-CoA kinase domain containing ENCODES a protein that exhibits dephospho-CoA kinase activity (ortholog) NW_004955451 17769268 17791509 - 102022875 AGCD01043773;GBCE01055043;XM_005394560;XM_005394561;XM_005394562;XM_013519155;XM_013519156 XP_005394617;XP_005394618;XP_005394619;XP_013374609;XP_013374610 MODEL 8852104 protein-coding Hvcn1 hydrogen voltage gated channel 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); voltage-gated monoatomic cation channel activity (ortholog); INVOLVED IN cellular response to pH (ortholog); cellular response to zinc ion (ortholog); positive regulation of superoxide anion generation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); middle cerebral artery infarction (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog); phagocytic vesicle membrane (ortholog) NW_004955482 7529009 7563273 - 102025007 AGCD01057474;AGCD01057475;GBBH01034214;XM_005403162;XM_005403163;XM_013503672;XM_013503673;XM_013503674 XP_005403219;XP_005403220;XP_013359126;XP_013359127;XP_013359128 MODEL 8728823 ncrna LOC102007912 uncharacterized LOC102007912 NW_004955495 2955662 2964666 + 102007912 AGCD01061813;GBDF01294554;XR_264137 MODEL 8904568 pseudo LOC102010545 COP9 signalosome complex subunit 8-like NW_004955406 37300353 37301399 - 102010545 AGCD01006573 MODEL 8838051 ncrna LOC102009397 uncharacterized LOC102009397 NW_004955423 12414062 12469348 + 102009397 AGCD01023718;GBDK01419002;XR_260967 MODEL 8993438 pseudo LOC102008645 glycolipid transfer protein pseudogene NW_004955501 6968136 6973149 + 102008645 AGCD01064202;XM_005406840 MODEL 8746305 pseudo LOC102011791 nuclear receptor-binding factor 2-like NW_004955512 4113871 4117507 - 102011791 AGCD01066729 MODEL 39134240 misc_rna 7SK 7SK RNA 8744909 protein-coding Creld1 CRELD disulfide isomerase 1 ASSOCIATED WITH Atrioventricular Septal Defect 2 (ortholog); Congenital Heart Defects, Multiple Types, 4 (ortholog); congenital heart disease (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) NW_004955561 1423229 1430679 + 102014091 AGCD01073855;GBDF01049881;XM_005413052;XM_005413053;XM_005413054 XP_005413109;XP_005413110;XP_005413111 MODEL 8915486 pseudo LOC102012157 signal peptidase complex catalytic subunit SEC11A pseudogene NW_004955406 365288 365823 - 102012157 AGCD01005615 MODEL 8743062 pseudo LOC102017822 60S acidic ribosomal protein P0 pseudogene NW_004955563 1331294 1333153 - 102017822 AGCD01074141 MODEL 8891557 protein-coding LOC102013688 major histocompatibility complex class I-related gene protein ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955406 20098544 20117065 + 102013688 AGCD01006097;GBCB01036344;XM_005374992 XP_005375049 MODEL 8771935 protein-coding LOC102020433 uncharacterized LOC102020433 NW_004955412 23868035 23928404 + 102020433 AGCD01013100;GBDF01083172;XM_013511076;XR_001232889;XR_001232890;XR_001232891;XR_001232892 XP_013366530 MODEL 39133966 misc_rna 7SK 7SK RNA 8810267 protein-coding C1qtnf3 C1q and TNF related 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); glucose homeostasis (ortholog); intracellular triglyceride homeostasis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); protein-containing complex (ortholog) NW_004955426 19588637 19606557 - 102028440 AGCD01026549;GBCB01010684;XM_005386168;XM_005386169 XP_005386225;XP_005386226 MODEL 8922558 protein-coding LOC102014814 zinc finger protein 14-like NW_004955432 4418023 4430693 + 102014814 AGCD01030719;AGCD01030720;GBCE01123759;XM_013515913 XP_013371367 MODEL 8868369 protein-coding Duox1 dual oxidase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); FAD binding (ortholog); heme binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cuticle development (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH influenza A (ortholog); FOUND IN apical plasma membrane (ortholog); cell leading edge (ortholog); cell surface (ortholog) NW_004955409 8228754 8256575 - 102026407 AGCD01009388;AGCD01009389;GBBH01189153;GBDI01081510;XM_005377149;XM_013510312;XM_013510313 XP_005377206;XP_013365766;XP_013365767 MODEL 9029836 protein-coding LOC102009805 translation initiation factor IF-2-like NW_004955408 1538854 1542633 - 102009805 AGCD01007963;AGCD01007964;GBCE01168250;XM_013507120 XP_013362574 MODEL 8706189 pseudo LOC102021213 YEATS domain-containing protein 4-like NW_004955460 13231488 13238875 - 102021213 AGCD01048675;AGCD01048676 MODEL 9003056 ncrna LOC102013341 uncharacterized LOC102013341 NW_004955438 12804313 12806768 + 102013341 AGCD01035273;GBDF01040134;XR_261928 MODEL 8977964 protein-coding Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); positive regulation of autophagosome assembly (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog); plasma membrane (ortholog) NW_004955435 12531651 12626969 + 102024373 AGCD01033150;AGCD01033151;AGCD01033152;AGCD01033153;AGCD01033154;AGCD01033155;AGCD01033156;AGCD01033157;AGCD01033158;GBDI01003986;XM_005388847;XM_005388848 XP_005388904;XP_005388905 MODEL 8703987 pseudo LOC102016661 kelch-like protein 12 NW_004955452 13484193 13486084 - 102016661 AGCD01044421 MODEL 8983348 protein-coding Antxrl ANTXR like NW_004955510 6297209 6343033 - 102022727 AGCD01066305;GBDF01085762;XM_013506337;XM_013506338;XM_013506339;XM_013506340;XM_013506341 XP_013361791;XP_013361792;XP_013361793;XP_013361794;XP_013361795 MODEL 8768483 protein-coding Dlgap3 DLG associated protein 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); molecular adaptor activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); modulation of chemical synaptic transmission (ortholog); protein-containing complex assembly (ortholog); FOUND IN cholinergic synapse (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955452 12981375 13039036 - 102014526 AGCD01044376;GBDF01076075;XM_005395128 XP_005395185 MODEL 8779079 ncrna LOC102005772 uncharacterized LOC102005772 NW_004955407 30090339 30104892 - 102005772 AGCD01007625;GBDF01113497;XR_259594 MODEL 8980221 protein-coding Igsf21 immunoglobin superfamily member 21 INVOLVED IN synapse maturation (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); inhibitory synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955527 773340 994679 - 102020371 AGCD01069387;GBCQ01162091;GBDF01111574;XM_005409806 XP_005409863 MODEL 39131905 rrna 5S_rRNA 5S ribosomal RNA 8734398 protein-coding Etnk2 ethanolamine kinase 2 ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); multicellular organism growth (ortholog); phosphatidylethanolamine biosynthetic process (ortholog) NW_004955406 39996850 40013753 - 102017842 AGCD01006650;GBDK01051887;XM_005375285 XP_005375342 MODEL 8851048 protein-coding LOC102021909 TIP41-like protein NW_004955433 23172811 23173440 + 102021909 AGCD01031954;XM_013516111 XP_013371565 MODEL 8716588 protein-coding LOC102009036 60S ribosomal protein L5 NW_004955469 9922760 9923788 - 102009036 AGCD01052521;XM_005400516 XP_005400573 MODEL 8982470 protein-coding LOC102014047 putative RNA-binding protein 15B NW_004955417 11225049 11227515 + 102014047 AGCD01018125;AGCD01018126;GBBH01122453;XM_013512700 XP_013368154 MODEL 8809451 protein-coding Ctnnd1 catenin delta 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH blepharocheilodontic syndrome 2 (ortholog); COVID-19 (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955511 2658879 2705992 + 102022316 AGCD01066425;AGCD01066426;GBBH01032167;XM_005408012;XM_005408017;XM_005408018;XM_013506443;XM_013506444;XM_013506445;XM_013506446;XM_013506447;XM_013506448;XM_013506449;XM_013506450;XM_013506451 XP_005408069;XP_005408074;XP_005408075;XP_013361897;XP_013361898;XP_013361899;XP_013361900;XP_013361901;XP_013361902;XP_013361903;XP_013361904;XP_013361905 MODEL 9068289 protein-coding Grm1 glutamate metabotropic receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential (ortholog); glutamate receptor activity (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to electrical stimulus (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive spinocerebellar ataxia 13 (ortholog); Bone Tissue Neoplasms (ortholog); FOUND IN axon (ortholog); dendriole (ortholog); dendrite (ortholog) NW_004955436 14264470 14377581 - 102027453 AGCD01033871;XM_013516588 XP_013372042 MODEL 8802923 pseudo LOC102011311 methionine aminopeptidase 2 pseudogene NW_004955416 12398435 12418557 - 102011311 AGCD01017205;AGCD01017206 MODEL 8995761 protein-coding Epha6 EPH receptor A6 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis NW_004955407 398415 1220542 - 102012926 AGCD01006740;AGCD01006741;AGCD01006742;AGCD01006743;AGCD01006744;AGCD01006745;AGCD01006746;AGCD01006747;AGCD01006748;AGCD01006749;AGCD01006750;AGCD01006751;AGCD01006752;AGCD01006753;AGCD01006754;AGCD01006755;AGCD01006756;AGCD01006757;AGCD01006758;AGCD01006759;AGCD01006760;AGCD01006761;AGCD01006762;AGCD01006763;AGCD01006764;AGCD01006765;AGCD01006766;AGCD01006767;AGCD01006768;AGCD01006769;AGCD01006770;AGCD01006771;AGCD01006772;AGCD01006773;AGCD01006774;AGCD01006775;AGCD01006776;AGCD01006777;AGCD01006778;AGCD01006779;AGCD01006780;AGCD01006781;AGCD01006782;AGCD01006783;AGCD01006784;AGCD01006785;AGCD01006786;GBCB01033975;XM_005375498;XM_005375499;XM_005375500;XM_013503527 XP_005375555;XP_005375556;XP_005375557;XP_013358981 MODEL 8998512 protein-coding Dennd1b DENN domain containing 1B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endocytic recycling (ortholog); positive regulation of GTPase activity (ortholog); positive regulation of T-helper 2 cell cytokine production (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog) NW_004955406 34021508 34241735 - 102030037 AGCD01006496;AGCD01006497;AGCD01006498;GBCB01075374;GBDI01111475;XM_013521889 XP_013377343 MODEL 8933621 pseudo LOC102014449 60S ribosomal protein L32 pseudogene NW_004955476 6140640 6141050 + 102014449 AGCD01055323 MODEL 8826181 protein-coding Acp2 acid phosphatase 2, lysosomal ENCODES a protein that exhibits acid phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN autophagic cell death (ortholog); lysosome organization (ortholog); response to cGMP (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Acid Phosphatase Deficiency (ortholog); FOUND IN lysosome (ortholog) NW_004955422 954108 961522 + 102023709 AGCD01022442;GBDF01127870;XM_005383978 XP_005384035 MODEL 8864237 ncrna LOC102020784 uncharacterized LOC102020784 NW_004955466 3625098 3632861 + 102020784 AGCD01050797;GBDF01179611;XR_263285 MODEL 9052183 pseudo LOC102015932 EF-hand domain-containing protein D1 pseudogene NW_004955409 32305466 32315030 + 102015932 AGCD01010357;AGCD01010358;AGCD01010359;XR_259814 MODEL 8983502 protein-coding Inhbc inhibin subunit beta C ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955458 5148923 5173136 + 102027615 AGCD01047461;AGCD01047462;AGCD01047463;AGCD01047464;AGCD01047465;AGCD01047466;AGCD01047467;GBDF01268750;XM_005397372 XP_005397429 MODEL 8888912 protein-coding LOC102011792 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 NW_004955431 5628023 5671009 + 102011792 AGCD01030037;AGCD01030038;XM_013515893;XM_013515894 XP_013371347;XP_013371348 MODEL 8821564 protein-coding Fez1 fasciculation and elongation protein zeta 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); establishment of cell polarity (ortholog); establishment of mitochondrion localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Parkinson's disease (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); centrosome (ortholog) NW_004955412 26477995 26530686 - 102020643 AGCD01013190;AGCD01013191;AGCD01013192;GBDJ01029328;XM_005378460;XM_013511169;XM_013511170 XP_005378517;XP_013366623;XP_013366624 MODEL 8800238 pseudo LOC102003943 forkhead box protein M1 pseudogene NW_004955406 36927530 36938489 + 102003943 AGCD01006570 MODEL 8783559 ncrna LOC102012158 uncharacterized LOC102012158 NW_004955407 18483756 18702374 - 102012158 AGCD01007271;AGCD01007272;AGCD01007273;AGCD01007274;AGCD01007275;GBDF01046486;XR_001231621;XR_001231624;XR_001231625;XR_001231626;XR_001231627;XR_001231628;XR_259571 MODEL 39133967 misc_rna 7SK 7SK RNA 8995934 protein-coding Creld2 CRELD disulfide isomerase 2 FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) NW_004955413 33039931 33046622 + 102018586 AGCD01014655;GBDF01007590;XM_005379532 XP_005379589 MODEL 9005810 protein-coding Cldn10 claudin 10 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); HELIX syndrome (ortholog); hypokalemia (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955404 14483217 14597912 - 102023974 AGCD01003509;AGCD01003510;AGCD01003511;AGCD01003512;AGCD01003513;AGCD01003514;AGCD01003515;AGCD01003516;GBBH01139843;XM_005374102;XM_005374103 XP_005374159;XP_005374160 MODEL 8830548 protein-coding C1qtnf4 C1q and TNF related 4 INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); gene expression (ortholog); inflammatory response (ortholog); FOUND IN extracellular space (ortholog) NW_004955422 705165 709261 + 102006787 AGCD01022431;AGCD01022432;GBCE01179740;GBDK01218895;XM_013514050 XP_013369504 MODEL 8736415 protein-coding LOC102008276 olfactory receptor 2H1 NW_004955583 74419 75726 + 102008276 AGCD01075793;GBDI01145055;XM_005414287 XP_005414344 MODEL 8929733 protein-coding LOC102024617 olfactory receptor 11H6-like NW_004955550 766566 767534 + 102024617 AGCD01072522;XM_005412138 XP_005412195 MODEL 8961535 protein-coding Dcbld1 discoidin, CUB and LCCL domain containing 1 ASSOCIATED WITH intellectual disability (ortholog); melanoma (ortholog) NW_004955436 688546 726952 + 102022424 AGCD01033554;AGCD01033555;AGCD01033556;GBBH01077171;GBDF01158986;XM_013516615 XP_013372069 MODEL 8809174 ncrna LOC102014816 uncharacterized LOC102014816 NW_004955515 1885241 1978029 - 102014816 AGCD01067239;AGCD01067240;AGCD01067241;AGCD01067242;GBDF01235615;XR_264520 MODEL 8964897 pseudo LOC102010546 ras-related protein Rab-5A-like NW_004955455 241706 244246 - 102010546 AGCD01045555 MODEL 8748204 protein-coding LOC102009806 inner nuclear membrane protein Man1 NW_004955458 11884435 11954683 + 102009806 AGCD01047763;AGCD01047764;GBBH01024965;GBCE01008629;XM_013520993 XP_013376447 MODEL 39131759 rrna 5S_rRNA 5S ribosomal RNA 8728223 protein-coding LOC102008649 olfactory receptor 5M11-like NW_004955511 1679591 1680559 - 102008649 AGCD01066377;XM_005407971 XP_005408028 MODEL 8930645 ncrna LOC102015548 uncharacterized LOC102015548 NW_004955506 1094592 1095488 + 102015548 AGCD01065244;GBDF01181732;XR_264319 MODEL 8844786 pseudo LOC102009401 CGG triplet repeat-binding protein 1-like NW_004955503 3186612 3188685 + 102009401 AGCD01064619 MODEL 8960680 ncrna LOC102016307 uncharacterized LOC102016307 NW_004955436 21128023 21132342 - 102016307 AGCD01034048;GBDI01232526;XR_261804 MODEL 9016378 protein-coding Elapor2 endosome-lysosome associated apoptosis and autophagy regulator family member 2 INVOLVED IN positive regulation of BMP signaling pathway (ortholog) NW_004955410 47021 98055 + 102027498 AGCD01010580;AGCD01010581;AGCD01010582;GBDK01130372;XM_005377188 XP_005377245 MODEL 8783033 pseudo LOC102019402 kinesin-associated protein 3 pseudogene NW_004955492 2924415 2926457 + 102019402 AGCD01060683 MODEL 8788066 protein-coding Dlgap4 DLG associated protein 4 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cholinergic synapse (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955422 25098914 25221238 - 102023161 AGCD01023245;AGCD01023246;AGCD01023247;GBDF01221819;XM_005384740;XM_005384741;XM_005384742;XM_005384743 XP_005384797;XP_005384798;XP_005384799;XP_005384800 MODEL 39134241 misc_rna 7SK 7SK RNA 8980382 protein-coding Igsf22 immunoglobulin superfamily member 22 NW_004955414 33364637 33378363 - 102023687 AGCD01015805;GBDF01144543;XM_013511745 XP_013367199 MODEL 8867979 protein-coding Kctd3 potassium channel tetramerization domain containing 3 ASSOCIATED WITH autistic disorder (ortholog); cerebellar hypoplasia (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 2500619 2539123 - 102012829 AGCD01005650;AGCD01005651;GBCB01039082;XM_005375446 XP_005375503 MODEL 8762066 pseudo LOC102008651 olfactory receptor 5W2-like NW_004955511 816950 817885 + 102008651 AGCD01066344 MODEL 8959850 protein-coding LOC102009041 natural cytotoxicity triggering receptor 3 ligand 1-like NW_004955414 32155049 32171552 + 102009041 AGCD01015774;AGCD01015775;AGCD01015776;GBDF01277682;XM_005380380;XM_005380381;XM_013512029 XP_005380437;XP_005380438;XP_013367483 MODEL 8818731 ncrna LOC102014048 uncharacterized LOC102014048 NW_004955481 9924244 9930207 - 102014048 AGCD01057127;GBDK01357816;XR_263799 MODEL 8993048 protein-coding Kansl1l KAT8 regulatory NSL complex subunit 1 like NW_004955457 5333490 5424632 + 102030279 AGCD01046817;AGCD01046818;GBDF01023878;XM_005396949 XP_005397006 MODEL 8913876 protein-coding CUNH5orf47 chromosome unknown C5orf47 homolog NW_004955408 26629049 26664803 + 102004678 AGCD01008672;GBDF01085946;GBDF01085947;XM_013507163;XM_013507167 XP_013362617;XP_013362621 MODEL 8920769 protein-coding Hyal1 hyaluronidase 1 ENCODES a protein that exhibits chondroitin hydrolase activity (ortholog); hyalurononglucosaminidase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH Kidney Reperfusion Injury (ortholog); mucopolysaccharidosis (ortholog); mucopolysaccharidosis IX (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular space (ortholog); hyaluranon cable (ortholog) NW_004955532 2113016 2116093 - 102029441 AGCD01070218;GBDI01261298;XM_005410257 XP_005410314 MODEL 8712518 protein-coding LOC102007913 uncharacterized LOC102007913 NW_004955423 26618752 26622551 + 102007913 AGCD01024102;AGCD01024103;GBDF01148474;XM_005385372 XP_005385429 MODEL 8976129 protein-coding LOC102012925 myotubularin-related protein 3 NW_004955455 4120714 4264635 + 102012925 AGCD01045667;AGCD01045668;AGCD01045669;AGCD01045670;AGCD01045671;AGCD01045672;AGCD01045673;GBDF01118467;XM_005396228;XM_005396229;XM_005396230;XM_005396231;XM_005396232;XM_005396233;XM_005396234;XM_005396235;XM_005396237;XM_005396238;XM_005396239 XP_005396285;XP_005396286;XP_005396287;XP_005396288;XP_005396289;XP_005396290;XP_005396291;XP_005396292;XP_005396294;XP_005396295;XP_005396296 MODEL 8716690 protein-coding LOC102011313 uncharacterized LOC102011313 NW_004955417 26374063 26401589 - 102011313 AGCD01018507;AGCD01018508;AGCD01018509;GBBH01003039;XM_005381923;XM_013512715;XM_013512716;XM_013512717;XM_013512718;XM_013512719;XM_013512720;XM_013512721;XM_013512722;XM_013512723;XM_013512724;XM_013512725;XM_013512726;XM_013512727;XM_013512728;XM_013512729;XM_013512730;XM_013512731;XM_013512732;XM_013512734;XR_001233417;XR_001233418 XP_005381980;XP_013368169;XP_013368170;XP_013368171;XP_013368172;XP_013368173;XP_013368174;XP_013368175;XP_013368176;XP_013368177;XP_013368178;XP_013368179;XP_013368180;XP_013368181;XP_013368182;XP_013368183;XP_013368184;XP_013368185;XP_013368186;XP_013368188 MODEL 10257898 protein-coding LOC106150007 uncharacterized LOC106150007 NW_004955460 8648783 8652074 + 106150007 AGCD01048528;XM_013521208;XR_001236519 XP_013376662 MODEL 8791845 protein-coding Epha7 EPH receptor A7 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); chemorepellent activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN brain development (ortholog); branching morphogenesis of a nerve (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); Hemorrhage (ortholog); lung small cell carcinoma (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955411 19652146 19815418 - 102012295 AGCD01012039;AGCD01012040;AGCD01012041;AGCD01012042;GBCQ01095584;XM_005377770;XM_005377771;XM_005377772;XM_005377773 XP_005377827;XP_005377828;XP_005377829;XP_005377830 MODEL 9005656 protein-coding LOC102016663 sperm-tail PG-rich repeat-containing protein 2-like NW_004955405 8290037 8443872 - 102016663 AGCD01004739;AGCD01004740;AGCD01004741;AGCD01004742;AGCD01004743;AGCD01004744;AGCD01004745;AGCD01004746;GBDF01014568;XM_013519373 XP_013374827 MODEL 9030007 pseudo LOC102014454 40S ribosomal protein S2 pseudogene NW_004955419 16537807 16538609 + 102014454 AGCD01020114 MODEL 8742840 protein-coding Anxa1 annexin A1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); alpha-beta T cell differentiation (ortholog); arachidonate secretion (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; ASSOCIATED WITH acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); asthma (ortholog); FOUND IN actin filament (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) NW_004955512 5686508 5703645 - 102007684 AGCD01066772;AGCD01066773;GBCE01002344;XM_005408325 XP_005408382 MODEL 8771261 protein-coding LOC102024620 CD209 antigen-like protein E NW_004955563 1541169 1545686 + 102024620 AGCD01074152;GBDK01148494;XM_013509177;XM_013509178;XM_013509179 XP_013364631;XP_013364632;XP_013364633 MODEL 8743063 protein-coding LOC102017825 vomeronasal type-1 receptor 3-like NW_004955569 1124261 1125758 - 102017825 AGCD01074639;XM_005413519 XP_005413576 MODEL 8868640 protein-coding Acp3 acid phosphatase 3 ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); acid phosphatase activity (ortholog); choline binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); dephosphorylation (ortholog); nucleotide metabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); Prostatic Neoplasms (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN apical part of cell (ortholog); extracellular space (ortholog); filopodium (ortholog) NW_004955501 6168083 6218934 - 102007574 AGCD01064181;AGCD01064182;AGCD01064183;GBBH01101532;XM_005406838;XM_013505810 XP_005406895;XP_013361264 MODEL 9047480 pseudo LOC102013689 signal recognition particle 9 kDa protein pseudogene NW_004955407 1763425 1763685 + 102013689 AGCD01006798 MODEL 8705385 protein-coding LOC102021910 olfactory receptor 10C1-like NW_004955524 278339 279310 + 102021910 AGCD01068674;XM_005409658 XP_005409715 MODEL 9007454 protein-coding Etnppl ethanolamine-phosphate phospho-lyase ENCODES a protein that exhibits ethanolamine-phosphate phospho-lyase activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); ceramide phosphoethanolamine catabolic process (ortholog); lipid homeostasis (ortholog) NW_004955496 1274929 1292802 + 102028103 AGCD01062252;GBDF01054944;XM_005406194 XP_005406251 MODEL 8841059 protein-coding LOC102020434 olfactory receptor 147-like NW_004955412 24590041 24598525 + 102020434 AGCD01013118;XM_005378631;XM_013510938 XP_005378688;XP_013366392 MODEL 9018507 protein-coding LOC102003944 keratin-associated protein 15-1-like NW_004955407 29796762 29797163 + 102003944 AGCD01007615;XM_005375632 XP_005375689 MODEL 8861293 protein-coding Ctnnd2 catenin delta 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN dendritic spine morphogenesis (ortholog); learning (ortholog); morphogenesis of a branching structure (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); perikaryon (ortholog); postsynaptic density (ortholog) NW_004955426 635287 1007389 - 102004402 AGCD01026003;AGCD01026004;AGCD01026005;GBCE01050163;GBDF01278836;XM_013515019;XM_013515020;XM_013515021;XM_013515022 XP_013370473;XP_013370474;XP_013370475;XP_013370476 MODEL 8984079 protein-coding Grm2 glutamate metabotropic receptor 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); glutamate receptor activity (ortholog); group II metabotropic glutamate receptor activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); cellular response to stress (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Binge Drinking (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); glutamatergic synapse (ortholog) NW_004955532 3309034 3320954 + 102018642 AGCD01070277;GBDF01198062;XM_005410320;XM_005410321;XM_013507564 XP_005410377;XP_005410378;XP_013363018 MODEL 8738712 protein-coding Abcb7 ATP binding cassette subfamily B member 7 ENCODES a protein that exhibits ABC-type iron-sulfur cluster transporter activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); iron ion transmembrane transport (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster export pathway; ASSOCIATED WITH Ataxia (ortholog); genetic disease (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955562 1079884 1220806 - 102025401 AGCD01073961;AGCD01073962;AGCD01073963;AGCD01073964;AGCD01073965;AGCD01073966;AGCD01073967;GBCB01058565;XM_005413086 XP_005413143 MODEL 39133968 misc_rna 7SK 7SK RNA 8905476 protein-coding Igsf3 immunoglobulin superfamily member 3 INVOLVED IN cell differentiation (ortholog); lacrimal gland development (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); lacrimal duct obstruction (ortholog); Lacrimal Puncta Agenesis (ortholog) NW_004955435 19703952 19796065 - 102003688 AGCD01033436;AGCD01033437;GBCE01077748;GBDJ01317924;XM_005389042 XP_005389099 MODEL 8852816 ncrna LOC102014050 uncharacterized LOC102014050 NW_004955420 12687317 12694051 + 102014050 AGCD01020884;GBDF01071654;XR_001233747 MODEL 8802328 protein-coding Cldn11 claudin 11 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axon ensheathment (ortholog); cell adhesion (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); hypomyelinating leukodystrophy 22 (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN axon (ortholog); basal part of cell (ortholog); bicellular tight junction (ortholog) NW_004955420 580588 595052 + 102021130 AGCD01020550;GBDF01002100;XM_005382982 XP_005383039 MODEL 9017718 ncrna LOC102014818 uncharacterized LOC102014818 NW_004955433 13814522 13928099 - 102014818 AGCD01031702;AGCD01031703;GBDF01251383;XR_001234723;XR_001234724 MODEL 39131906 rrna 5S_rRNA 5S ribosomal RNA 8802790 protein-coding LOC102005777 uncharacterized LOC102005777 NW_004955408 35127767 35155131 - 102005777 AGCD01008930;XM_013507575 XP_013363029 MODEL 8844995 protein-coding Crem cAMP responsive element modulator ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); fatty acid metabolic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Cardiomegaly (ortholog); Chloracne (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955462 2491504 2547587 - 102016355 AGCD01049169;AGCD01049170;AGCD01049171;GBDF01009042;JN633503;XM_005398113;XM_005398114;XM_005398116;XM_005398118;XM_005398120;XM_005398121;XM_005398122;XM_005398123;XM_013521447;XM_013521448;XM_013521449;XM_013521450;XM_013521451 AEO95174;XP_005398170;XP_005398171;XP_005398173;XP_005398175;XP_005398177;XP_005398178;XP_005398179;XP_005398180;XP_013376901;XP_013376902;XP_013376903;XP_013376904;XP_013376905 MODEL 8728419 pseudo LOC102015936 60S ribosomal protein L26-like 1 pseudogene NW_004955466 8883590 8883988 + 102015936 AGCD01051003 MODEL 10243479 ncrna LOC106150008 uncharacterized LOC106150008 NW_004955460 13641877 13643314 + 106150008 AGCD01048713;GBCC01034086;XR_001236521 MODEL 8924044 protein-coding Dcbld2 discoidin, CUB and LCCL domain containing 2 INVOLVED IN negative regulation of cell growth (ortholog); wound healing (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); Stomach Neoplasms (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955427 453820 536720 - 102016729 AGCD01026834;AGCD01026835;AGCD01026836;AGCD01026837;GBCB01098564;XM_013515115;XM_013515116;XM_013515117;XM_013515118;XM_013515119 XP_013370569;XP_013370570;XP_013370571;XP_013370572;XP_013370573 MODEL 39134242 misc_rna 7SK 7SK RNA 8969745 ncrna LOC102024623 uncharacterized LOC102024623 NW_004955445 11329814 11335144 - 102024623 AGCD01039687;GBCE01071386;XR_001235598;XR_262329 MODEL 8701356 pseudo LOC102021214 interferon regulatory factor 8 pseudogene NW_004955409 1904386 1909564 + 102021214 AGCD01009184 MODEL 8985665 protein-coding Elavl1 ELAV like RNA binding protein 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); lncRNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cell population proliferation (ortholog); lncRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH degenerative disc disease (ortholog); endometriosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytoplasmic vesicle (ortholog) NW_004955563 1283424 1315283 + 102017516 AGCD01074139;AGCD01074140;GBDF01002281;GBDF01002282;XM_005413137 XP_005413194 MODEL 8737240 protein-coding Anxa10 annexin A10 ASSOCIATED WITH hepatocellular carcinoma (ortholog); pancreatic cancer (ortholog) NW_004955403 37780428 37821212 - 102011723 AGCD01002575;GBDK01223538;XM_013513460 XP_013368914 MODEL 8721309 ncrna LOC102019406 uncharacterized LOC102019406 NW_004955422 17689447 17710741 - 102019406 AGCD01022932;GBDF01207243;XR_001233931;XR_001233932 MODEL 8714607 protein-coding Dennd1c DENN domain containing 1C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway NW_004955495 3139411 3148389 + 102010278 AGCD01061828;GBBH01150256;XM_005405710;XM_005405711;XM_013505301;XM_013505302;XM_013505303;XM_013505304;XM_013505305 XP_005405767;XP_005405768;XP_013360755;XP_013360756;XP_013360757;XP_013360758;XP_013360759 MODEL 8716779 protein-coding Kctd4 potassium channel tetramerization domain containing 4 NW_004955518 2977055 2987676 - 102013203 AGCD01067789;GBCC01038644;XM_005409082;XM_005409083 XP_005409139;XP_005409140 MODEL 8995558 protein-coding C1qtnf5 C1q and TNF related 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN inner ear development (ortholog); protein secretion (ortholog); ASSOCIATED WITH isolated microphthalmia 5 (ortholog); late-onset retinal degeneration (ortholog); lens disease (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); extracellular region (ortholog) NW_004955412 20419754 20421541 - 102006558 AGCD01013008;GBDI01171673;XM_005378334 XP_005378391 MODEL 8880610 protein-coding LOC102010548 keratin-associated protein 20-2-like NW_004955407 30234861 30239217 - 102010548 AGCD01007628;AGCD01007629;XM_005375651;XM_013506303 XP_005375708;XP_013361757 MODEL 39131760 rrna 5S_rRNA 5S ribosomal RNA 8855033 protein-coding Hyal2 hyaluronidase 2 ENCODES a protein that exhibits enzyme binding (ortholog); hyaluronic acid binding (ortholog); hyaluronoglucuronidase activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH CLEFT LIP AND PALATE-CRANIOFACIAL DYSMORPHISM-CONGENITAL HEART DEFECT-HEARING LOSS SYNDROME (ortholog); genetic disease (ortholog); Kidney Reperfusion Injury (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955532 2120781 2125083 - 102029997 AGCD01070218;AGCD01070219;GBCE01137215;GBDF01080402;XM_013507587 XP_013363041 MODEL 8966967 protein-coding LOC102020786 olfactory receptor 10S1-like NW_004955412 24624781 24625770 - 102020786 AGCD01013118;XM_005378632 XP_005378689 MODEL 8977046 ncrna LOC102016664 uncharacterized LOC102016664 NW_004955453 7868981 7878428 - 102016664 AGCD01044754;GBDF01279551;XR_262719 MODEL 8817328 ncrna LOC102011796 uncharacterized LOC102011796 NW_004955433 7192628 7234562 + 102011796 AGCD01031566;AGCD01031567;GBDF01254267;XR_001234703;XR_001234704;XR_261565 MODEL 9059341 protein-coding LOC102014456 olfactory receptor 4C45-like NW_004955422 220599 236037 + 102014456 AGCD01022401;GBDF01280928;XM_005383943;XM_005383944 XP_005384000;XP_005384001 MODEL 9004275 protein-coding Duox2 dual oxidase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN adenohypophysis morphogenesis (ortholog); bone mineralization (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH cholera (ortholog); congenital hypothyroidism (ortholog); Crohn's disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); cell leading edge (ortholog) NW_004955409 8270657 8288201 + 102026725 AGCD01009391;AGCD01009392;AGCD01009393;GBDI01081489;XM_013510065 XP_013365519 MODEL 9055045 ncrna LOC102013342 uncharacterized LOC102013342 NW_004955440 5501646 5568701 - 102013342 AGCD01036274;AGCD01036275;AGCD01036276;GBCE01049183;XR_001235281;XR_001235282;XR_001235283 MODEL 8914868 protein-coding LOC102012159 keratin-associated protein 11-1 NW_004955407 30616573 30617451 - 102012159 AGCD01007639;XM_005375656 XP_005375713 MODEL 8878375 protein-coding Dlgap5 DLG associated protein 5 ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955409 8408040 8445587 + 102025879 AGCD01009407;AGCD01009408;AGCD01009409;AGCD01009410;AGCD01009411;GBDF01087616;XM_005376750;XM_013510318;XM_013510319 XP_005376807;XP_013365772;XP_013365773 MODEL 8886398 pseudo LOC102009045 60S ribosomal protein L12-like NW_004955475 11058006 11058745 + 102009045 AGCD01055139 MODEL 9006846 protein-coding Kansl2 KAT8 regulatory NSL complex subunit 2 ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytosol (ortholog); histone acetyltransferase complex (ortholog); mitochondrion (ortholog) NW_004955500 7552747 7572991 - 102030649 AGCD01063932;AGCD01063933;GBBH01089932;GBCQ01099796;XM_013505716 XP_013361170 MODEL 9040548 protein-coding LOC102020436 ovostatin homolog NW_004955413 5685675 5730245 + 102020436 AGCD01013688;AGCD01013689;AGCD01013690;GBDI01013890;XM_005378884;XM_005378885 XP_005378941;XP_005378942 MODEL 8847933 protein-coding CUNH6orf118 chromosome unknown C6orf118 homolog NW_004955439 16386460 16404123 + 102004425 AGCD01036022;GBDF01046521;XM_005390678;XM_005390680;XM_013517417;XR_001235217;XR_261993 XP_005390735;XP_005390737;XP_013372871 MODEL 8866725 ncrna LOC102024625 uncharacterized LOC102024625 NW_004955448 8801047 8863960 - 102024625 AGCD01041450;AGCD01041451;AGCD01041452;GBDF01111681;XR_001235758;XR_262467 MODEL 8948621 ncrna LOC102007919 uncharacterized LOC102007919 NW_004955501 6607112 6613567 - 102007919 AGCD01064198;GBDF01156852;XR_264255 MODEL 8935401 protein-coding LOC102019408 olfactory receptor 7G2-like NW_004955495 141820 142770 - 102019408 AGCD01061603;XM_005406113 XP_005406170 MODEL 8767706 ncrna LOC102012930 uncharacterized LOC102012930 NW_004955408 11342486 11344637 + 102012930 AGCD01008307;GBDF01286807;XR_259678 MODEL 9026321 protein-coding Abcb8 ATP binding cassette subfamily B member 8 ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN cell volume homeostasis (ortholog); mitochondrial potassium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Recurrence (ortholog); Thyroid Neoplasms (ortholog); FOUND IN mitochondrial ATP-gated potassium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955491 5468855 5485568 + 102028644 AGCD01060484;GBCE01116645;XM_005404804;XM_005404805;XM_013504582 XP_005404861;XP_005404862;XP_013360036 MODEL 8800605 protein-coding LOC102011316 olfactory receptor 2T2-like NW_004955418 30170706 30175904 - 102011316 AGCD01019506;GBBH01082943;XM_005382368 XP_005382425 MODEL 8996395 pseudo LOC102009404 sorting nexin-6 pseudogene NW_004955427 21883319 21885923 - 102009404 AGCD01027461 MODEL 8942362 ncrna LOC102014821 uncharacterized LOC102014821 NW_004955435 8860432 8890817 - 102014821 AGCD01033021;GBDF01110732;XR_261675 MODEL 39131761 rrna 5S_rRNA 5S ribosomal RNA 8950289 protein-coding Cldn12 claudin 12 INVOLVED IN tight junction assembly (ortholog); FOUND IN cell periphery (ortholog); lateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955432 7632382 7640024 + 102022527 AGCD01030853;GBDF01035196;XM_005387993 XP_005388050 MODEL 8939181 protein-coding Fez2 fasciculation and elongation protein zeta 2 INVOLVED IN negative regulation of autophagosome assembly (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); Weight Gain (ortholog) NW_004955441 4421936 4456070 - 102027790 AGCD01036839;GBCQ01095795;GBDJ01316168;XM_013517614;XM_013517615 XP_013373068;XP_013373069 MODEL 8819642 pseudo LOC102013690 mediator of RNA polymerase II transcription subunit 28 pseudogene NW_004955407 31231791 31232327 - 102013690 AGCD01007643 MODEL 8919989 pseudo LOC102021911 protein kinase C iota type pseudogene NW_004955435 4713737 4714888 - 102021911 AGCD01032843 MODEL 10305060 ncrna LOC106150009 uncharacterized LOC106150009 NW_004955460 13690622 13695162 - 106150009 AGCD01048718;GBDK01350798;XR_001236522 MODEL 8820360 protein-coding LOC102008652 heterogeneous nuclear ribonucleoprotein A1-like NW_004955514 3637451 3647575 + 102008652 AGCD01067102;XM_013506747 XP_013362201 MODEL 39134243 misc_rna 7SK 7SK RNA 8852638 protein-coding Ets1 ETS proto-oncogene 1, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); cell motility (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN altered p53 signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH celiac disease (ortholog); Experimental Diabetes Mellitus (ortholog); Mouth Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955412 29433730 29602389 - 102010567 AGCD01013279;AGCD01013280;AGCD01013281;AGCD01013282;AGCD01013283;GBCC01027243;XM_005378524;XM_005378525;XM_005378526;XM_005378527;XM_005378529;XM_013511111;XM_013511112;XM_013511113 XP_005378581;XP_005378582;XP_005378583;XP_005378584;XP_005378586;XP_013366565;XP_013366566;XP_013366567 MODEL 8772384 protein-coding LOC102021215 olfactory receptor 10AC1-like NW_004955460 10681262 10683096 - 102021215 AGCD01048600;XM_013521116 XP_013376570 MODEL 8818909 protein-coding Ctns cystinosin, lysosomal cystine transporter ENCODES a protein that exhibits L-cystine transmembrane transporter activity (ortholog); solute:proton symporter activity (ortholog); INVOLVED IN adult walking behavior (ortholog); ATP metabolic process (ortholog); brain development (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH Abderhalden-Kaufmann-Lignac Syndrome (ortholog); cystinosis (ortholog); Cystinosis, Late-Onset Juvenile or Adolescent Nephropathic Type (ortholog); FOUND IN early endosome (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) NW_004955467 13151663 13169005 - 102021112 AGCD01051667;GBDF01082657;XM_005399718;XM_005399719;XM_005399720;XM_005399721 XP_005399775;XP_005399776;XP_005399777;XP_005399778 MODEL 8719849 protein-coding LOC102009819 splicing factor, arginine/serine-rich 19-like NW_004955413 3207197 3209122 - 102009819 AGCD01013568;GBDI01085078;XM_005378751;XM_005378752;XM_013511272;XR_001232932 XP_005378808;XP_005378809;XP_013366726 MODEL 8809961 pseudo LOC102015549 ras-related protein Rab-5A pseudogene NW_004955427 3406284 3411397 - 102015549 AGCD01026938 MODEL 9057974 ncrna LOC102014053 uncharacterized LOC102014053 NW_004955420 22475431 22480000 - 102014053 AGCD01021201;GBDJ01342875;XR_001233774;XR_001233775;XR_001233776;XR_260737 MODEL 8955756 protein-coding Grm3 glutamate metabotropic receptor 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); group II metabotropic glutamate receptor activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN cellular response to stress (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH melanoma (ortholog); schizophrenia (ortholog); temporal lobe epilepsy (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); dendritic spine (ortholog) NW_004955410 103774 185062 - 102012936 AGCD01010582;AGCD01010583;AGCD01010584;GBDK01309584;XM_013510486 XP_013365940 MODEL 8867299 ncrna LOC102016312 uncharacterized LOC102016312 NW_004955439 4522810 4578321 + 102016312 AGCD01035713;GBDF01114321;XR_261972 MODEL 39131907 rrna 5S_rRNA 5S ribosomal RNA 8792398 protein-coding C1qtnf6 C1q and TNF related 6 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog); myocardial infarction (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); protein-containing complex (ortholog) NW_004955413 23661788 23669793 - 102008523 AGCD01014333;GBDK01025155;XM_013511301 XP_013366755 MODEL 8963002 protein-coding Inhbe inhibin subunit beta E ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN negative regulation of adipose tissue development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lipid storage disease (ortholog) NW_004955458 5177036 5179095 + 102027947 AGCD01047467;XM_005397373 XP_005397430 MODEL 8710020 ncrna LOC102017826 uncharacterized LOC102017826 NW_004955447 224885 228738 - 102017826 AGCD01040449;GBDI01039983;XR_262402 MODEL 8993937 pseudo LOC102005778 small nuclear ribonucleoprotein Sm D1 pseudogene NW_004955458 15135529 15136459 - 102005778 AGCD01047865 MODEL 8977075 protein-coding Ets2 ETS proto-oncogene 2, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN ectodermal cell fate commitment (ortholog); mesoderm development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955407 37747152 37764170 + 102020309 AGCD01007785;GBDF01304491;XM_005375762 XP_005375819 MODEL 8982541 protein-coding Crh corticotropin releasing hormone ENCODES a protein that exhibits corticotropin-releasing hormone receptor 1 binding (ortholog); corticotropin-releasing hormone receptor 2 binding (ortholog); INVOLVED IN adrenal gland development (ortholog); associative learning (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN extracellular space (ortholog); neuronal cell body (ortholog); neuronal dense core vesicle lumen (ortholog) NW_004955444 12989210 12991300 + 102017821 AGCD01039088;XM_005392154 XP_005392211 MODEL 8786459 pseudo LOC102015937 replication protein A 70 kDa DNA-binding subunit pseudogene NW_004955412 29948306 29949423 - 102015937 AGCD01013287;XR_260031 MODEL 8969211 pseudo LOC102003945 histone deacetylase 2-like NW_004955455 3394770 3415325 + 102003945 AGCD01045624;AGCD01045625;AGCD01045626 MODEL 8949353 ncrna LOC102011798 uncharacterized LOC102011798 NW_004955521 1606251 1622200 - 102011798 AGCD01068190;GBDF01280812;XR_001231893;XR_001231894 MODEL 9049230 ncrna LOC102013345 uncharacterized LOC102013345 NW_004955442 8943995 9025234 - 102013345 AGCD01037655;AGCD01037656;AGCD01037657;AGCD01037658;AGCD01037659;AGCD01037660;GBDF01040016;XR_262126 MODEL 9036098 ncrna LOC102012163 uncharacterized LOC102012163 NW_004955409 610554 611768 - 102012163 AGCD01009158;GBDF01126147;XR_259741 MODEL 8710178 protein-coding Dlk1 delta like non-canonical Notch ligand 1 INVOLVED IN bone mineralization (ortholog); cell differentiation (ortholog); embryonic skeletal system development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; Notch signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH biliary atresia (ortholog); central precocious puberty (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955627 37886 43730 - 102024746 AGCD01077479;GBDF01049151;GBDK01224500;XM_005415026 XP_005415083 MODEL 8981975 protein-coding Dennd2a DENN domain containing 2A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN retrograde transport, endosome to Golgi (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955494 2768097 2831809 + 102021140 AGCD01061450;AGCD01061451;GBCE01111512;GBDK01245228;XM_013505021 XP_013360475 MODEL 8971374 protein-coding Igsf5 immunoglobulin superfamily member 5 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN bicellular tight junction (ortholog); cell surface (ortholog) NW_004955407 38468873 38510040 + 102027815 AGCD01007807;AGCD01007808;GBCQ01017451;XM_005375775;XM_005375776;XM_005375777;XM_005375778 XP_005375832;XP_005375833;XP_005375834;XP_005375835 MODEL 8798443 protein-coding Epha8 EPH receptor A8 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH High Myopia (ortholog); FOUND IN neuron projection (ortholog); plasma membrane (ortholog) NW_004955452 2702277 2729161 + 102012603 AGCD01043903;GBDF01242136;XM_013519449;XR_001236014 XP_013374903 MODEL 8861444 ncrna LOC102008279 uncharacterized LOC102008279 NW_004955450 14296448 14299942 - 102008279 AGCD01042742;GBDF01052413;XR_001235869;XR_001235870 MODEL 9012606 protein-coding Acp4 acid phosphatase 4 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN negative regulation of ERBB4 signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of protein processing (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1J (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog); synaptic membrane (ortholog) NW_004955559 481953 488464 - 102013765 AGCD01073587;GBDF01196190;XM_005412767;XM_005412769;XM_005412770;XM_013509062;XM_013509063;XM_013509064 XP_005412824;XP_005412826;XP_005412827;XP_013364516;XP_013364517;XP_013364518 MODEL 8960674 pseudo LOC102014828 transmembrane protein 126A pseudogene NW_004955537 66637 67161 + 102014828 AGCD01070850 MODEL 9055858 protein-coding Dcc DCC netrin 1 receptor ENCODES a protein that exhibits identical protein binding (ortholog); netrin receptor activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN anterior/posterior axon guidance (ortholog); axon development (ortholog); axon guidance (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); amenorrhea (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); growth cone membrane (ortholog); postsynaptic density membrane (ortholog) NW_004955402 37123112 38218876 + 102023650 AGCD01000941;AGCD01000942;AGCD01000943;AGCD01000944;AGCD01000945;AGCD01000946;AGCD01000947;AGCD01000948;AGCD01000949;AGCD01000950;AGCD01000951;AGCD01000952;AGCD01000953;AGCD01000954;AGCD01000955;AGCD01000956;AGCD01000957;AGCD01000958;GBDF01123902;XM_005372942;XM_005372943;XM_005372944 XP_005372999;XP_005373000;XP_005373001 MODEL 8922554 ncrna LOC102014457 uncharacterized LOC102014457 NW_004955491 4704581 4706876 + 102014457 AGCD01060458;GBCQ01149630;XR_264035 MODEL 9049552 pseudo LOC102005779 unconventional myosin-Va pseudogene NW_004955459 2117974 2121858 - 102005779 AGCD01047982 MODEL 8982355 protein-coding LOC102009047 protein FAM122A-like NW_004955415 23111023 23111850 + 102009047 AGCD01016551;XM_013512167 XP_013367621 MODEL 10063069 protein-coding LOC106150010 translation initiation factor IF-2-like NW_004955460 7458336 7460814 + 106150010 AGCD01048482;GBDF01006275;XM_013521221 XP_013376675 MODEL 8775855 protein-coding Anxa11 annexin A11 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cytokinetic process (ortholog); phagocytosis (ortholog); response to calcium ion (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 23 (ortholog); genetic disease (ortholog); FOUND IN azurophil granule (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 13119782 13161196 - 102016744 AGCD01034647;GBCC01008901;GBDI01004969;XM_005389885 XP_005389942 MODEL 8998251 ncrna LOC102020437 uncharacterized LOC102020437 NW_004955413 28925186 28946175 - 102020437 AGCD01014572;AGCD01014573;GBDK01298645;XR_001232988;XR_001232989;XR_001232990;XR_260121 MODEL 9019568 protein-coding CUNH6orf132 chromosome unknown C6orf132 homolog NW_004955437 8337580 8362873 - 102021914 AGCD01034486;AGCD01034487;GBCQ01150917;XM_005389717;XM_013516785 XP_005389774;XP_013372239 MODEL 9053768 pseudo LOC102024626 ATP-binding cassette sub-family D member 3-like NW_004955448 13855290 13858175 + 102024626 AGCD01041607 MODEL 8719926 pseudo LOC102012938 60S ribosomal protein L37a-like NW_004955464 13764223 13764774 + 102012938 AGCD01050293 MODEL 9040769 protein-coding Hyal3 hyaluronidase 3 ENCODES a protein that exhibits hyaluronoglucuronidase activity (ortholog); hyalurononglucosaminidase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog) NW_004955532 2107019 2112356 - 102028465 AGCD01070217;GBBH01160662;GBDK01192130;XM_005410254 XP_005410311 MODEL 8715714 pseudo LOC102019411 probable global transcription activator SNF2L2 NW_004955500 1745320 1748206 + 102019411 AGCD01063681 MODEL 8702991 protein-coding LOC102007924 olfactory receptor 5B12-like NW_004955511 3402858 3403802 + 102007924 AGCD01066460;XM_005408265 XP_005408322 MODEL 8714803 pseudo LOC102016668 ras-related protein Rab-5A pseudogene NW_004955406 8075906 8076761 + 102016668 AGCD01005791 MODEL 9037517 protein-coding LOC102009405 suppressor protein SRP40-like NW_004955428 50432 51439 - 102009405 AGCD01027559;XM_005386839 XP_005386896 MODEL 8946454 ncrna LOC102011319 uncharacterized LOC102011319 NW_004955484 8530719 8557626 + 102011319 AGCD01058391;AGCD01058392;AGCD01058393;GBDF01038957;XR_263894 MODEL 8986522 protein-coding LOC102020787 uncharacterized LOC102020787 NW_004955467 9583663 9587823 - 102020787 AGCD01051519;GBDK01413799;XM_005399519;XM_013522123;XM_013522124;XM_013522125;XM_013522127 XP_005399576;XP_013377577;XP_013377578;XP_013377579;XP_013377581 MODEL 39131762 rrna 5S_rRNA 5S ribosomal RNA 9038632 protein-coding Abcb9 ATP binding cassette subfamily B member 9 ENCODES a protein that exhibits ABC-type oligopeptide transporter activity (ortholog); ABC-type peptide transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); peptide metabolic process (ortholog); peptide transport (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955482 5817334 5838642 + 102024229 AGCD01057349;AGCD01057350;GBBH01183746;GBDF01306028;XM_005403060;XM_013503662;XM_013503663 XP_005403117;XP_013359116;XP_013359117 MODEL 9009786 protein-coding Grm4 glutamate metabotropic receptor 4 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); osteosarcoma (ortholog); temporal lobe epilepsy (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); cytoplasmic vesicle (ortholog); dendritic shaft (ortholog) NW_004955437 2358839 2449145 - 102013211 AGCD01034264;AGCD01034265;AGCD01034266;AGCD01034267;GBDF01040768;XM_005389511;XM_013516709 XP_005389568;XP_013372163 MODEL 8884264 protein-coding Duoxa1 dual oxidase maturation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide biosynthetic process (ortholog); hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); FOUND IN cell leading edge (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955409 8256707 8266891 + 102023560 AGCD01009390;AGCD01009391;GBCE01009592;XM_005376741;XM_005376742;XM_005376743;XM_013510336;XM_013510337 XP_005376798;XP_005376799;XP_005376800;XP_013365790;XP_013365791 MODEL 8924367 protein-coding Elavl2 ELAV like RNA binding protein 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of synapse assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); lung small cell carcinoma (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); synapse (ortholog) NW_004955472 10550138 10710756 + 102029958 AGCD01053717;AGCD01053718;AGCD01053719;AGCD01053720;AGCD01053721;AGCD01053722;GBDF01227616;XM_005401159;XM_005401160;XM_005401161;XM_005401163;XM_013522923;XM_013522924;XM_013522925 XP_005401216;XP_005401217;XP_005401218;XP_005401220;XP_013378377;XP_013378378;XP_013378379 MODEL 8876498 protein-coding Cldn14 claudin 14 ASSOCIATED WITH Acidoses (ortholog); autosomal recessive nonsyndromic deafness 29 (ortholog); Deafness (ortholog); FOUND IN bicellular tight junction (ortholog); plasma membrane (ortholog) NW_004955407 35641560 35728105 - 102010550 AGCD01007750;GBDI01155906;XM_005375735;XM_005375736 XP_005375792;XP_005375793 MODEL 8743223 protein-coding LOC102021913 melanoma-associated antigen B1-like NW_004955531 838720 839739 - 102021913 AGCD01070014;XM_005410143 XP_005410200 MODEL 39133969 misc_rna 7SK 7SK RNA 8899212 ncrna LOC102013691 uncharacterized LOC102013691 NW_004955407 36163435 36172339 + 102013691 AGCD01007759;AGCD01007760;GBDF01020070;XR_259615 MODEL 9015264 protein-coding LOC102016669 uncharacterized LOC102016669 NW_004955407 39590200 39601969 - 102016669 AGCD01007831;GBDJ01063082;XM_005375836;XM_005375837;XM_005375838;XM_005375839;XM_013505204;XR_001231358;XR_001231359 XP_005375893;XP_005375894;XP_005375895;XP_005375896;XP_013360658 MODEL 8789174 pseudo LOC102008653 dual specificity mitogen-activated protein kinase kinase 1 pseudogene NW_004955515 3622654 3623565 - 102008653 AGCD01067294 MODEL 9003294 protein-coding Kctd5 potassium channel tetramerization domain containing 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); FOUND IN cytosol (ortholog) NW_004955442 14658612 14684928 - 102020293 AGCD01037832;GBDJ01064500;XM_005391416 XP_005391473 MODEL 9000372 pseudo LOC102021218 glycerophosphodiester phosphodiesterase 1 pseudogene NW_004955463 13811148 13812387 + 102021218 AGCD01049888 MODEL 8716687 protein-coding LOC102010566 olfactory receptor 151-like NW_004955412 25630768 25631700 + 102010566 AGCD01013166;XM_005378428 XP_005378485 MODEL 8703977 pseudo LOC102015560 RNA-binding protein 7 pseudogene NW_004955434 16063246 16064603 - 102015560 AGCD01032511 MODEL 8979794 protein-coding LOC102009822 TRIO and F-actin-binding protein NW_004955413 24125506 24147260 + 102009822 AGCD01014348;AGCD01014349;GBDI01083298;GBDK01078508;XM_005379226 XP_005379283 MODEL 8711253 pseudo LOC102014055 40S ribosomal protein S29 pseudogene NW_004955421 41674 43155 + 102014055 AGCD01021542 MODEL 8993565 pseudo LOC102016313 6.8 kDa mitochondrial proteolipid pseudogene NW_004955441 7081387 7081567 - 102016313 AGCD01036950 MODEL 39131908 rrna 5S_rRNA 5S ribosomal RNA 8754673 protein-coding Inip INTS3 and NABP interacting protein INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog) NW_004955419 14729275 14732971 + 102003023 AGCD01020042;AGCD01020043;GBCQ01099369;GBCQ01099370;XM_005382701 XP_005382758 MODEL 9045170 protein-coding LOC102008284 protocadherin gamma-B7-like NW_004957427 6 1475 - 102008284 AGCD01080823;GBDF01178990;XM_005415230 XP_005415287 MODEL 9067035 protein-coding Etv1 ETS variant transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); mechanosensory behavior (ortholog); muscle organ development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neoplastic Processes (ortholog); Prostatic Neoplasms (ortholog) NW_004955410 17445496 17535856 - 102018368 AGCD01010989;GBDF01182370;XM_013510658;XM_013510659;XM_013510660;XM_013510662;XM_013510663 XP_013366112;XP_013366113;XP_013366114;XP_013366116;XP_013366117 MODEL 8931604 protein-coding LOC102014830 alpha-1-antiproteinase 2-like NW_004955438 16449737 16463768 - 102014830 AGCD01035415;AGCD01035416;AGCD01035417;XM_005390447 XP_005390504 MODEL 9036679 pseudo LOC102003946 acyl-CoA-binding domain-containing protein 6 pseudogene NW_004955407 13736680 13744398 - 102003946 AGCD01007152 MODEL 8992676 protein-coding Crhbp corticotropin releasing hormone binding protein ENCODES a protein that exhibits corticotropin-releasing hormone binding (ortholog); peptide binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to calcium ion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); Binge Drinking (ortholog); cocaine abuse (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955425 23953957 23966207 - 102019619 AGCD01025868;GBCE01003989;XM_005386033 XP_005386090 MODEL 39134244 misc_rna 7SK 7SK RNA 10378497 protein-coding Dcd dermcidin ENCODES a protein that exhibits lipid binding (ortholog); monoatomic anion channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN antibacterial humoral response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); extrinsic component of membrane (ortholog) NW_004955458 1875244 1879434 - 106149940 AGCD01047206;GBCQ01054564;XM_013520796 XP_013376250 MODEL 8757681 protein-coding Kansl3 KAT8 regulatory NSL complex subunit 3 INVOLVED IN regulation of mitochondrial transcription (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN histone acetyltransferase complex (ortholog); mitochondrion (ortholog); NSL complex (ortholog) NW_004955470 3976094 4036656 - 102020651 AGCD01052713;AGCD01052714;AGCD01052715;GBDK01433306;XM_005400676;XM_005400679;XM_013522713;XM_013522714;XM_013522715;XM_013522716;XM_013522717;XM_013522718;XM_013522719;XM_013522721;XM_013522722;XR_001237009;XR_001237010 XP_005400733;XP_005400736;XP_013378167;XP_013378168;XP_013378169;XP_013378170;XP_013378171;XP_013378172;XP_013378173;XP_013378175;XP_013378176 MODEL 8754871 ncrna LOC102012171 uncharacterized LOC102012171 NW_004955462 1256543 1258197 + 102012171 AGCD01049105;GBDF01021159;XR_263088 MODEL 8917387 pseudo LOC102005781 putative 40S ribosomal protein S26-like 1 NW_004955462 251999 253115 + 102005781 AGCD01049074 MODEL 8735288 protein-coding Duoxa2 dual oxidase maturation factor 2 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide biosynthetic process (ortholog); hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); familial thyroid dyshormonogenesis (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); cell leading edge (ortholog); cytosol (ortholog) NW_004955409 8266873 8270486 - 102023009 AGCD01009391;GBDI01008400;XM_005376739;XM_005376740 XP_005376796;XP_005376797 MODEL 9066185 protein-coding Dlk2 delta like non-canonical Notch ligand 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); regulation of fat cell differentiation (ortholog) NW_004955437 9297557 9302581 - 102007813 AGCD01034524;AGCD01034525;GBCC01001936;XM_005389766;XM_005389767;XM_013516814;XM_013516815 XP_005389823;XP_005389824;XP_013372268;XP_013372269 MODEL 8731070 protein-coding Igsf6 immunoglobulin superfamily member 6 ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955493 1109910 1119806 - 102017349 AGCD01060878;GBDK01072125;XM_005405086 XP_005405143 MODEL 8871607 protein-coding Dennd2b DENN domain containing 2B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog) NW_004955414 24470795 24632507 - 102020794 AGCD01015547;AGCD01015548;AGCD01015549;AGCD01015550;GBBH01115663;XM_013511888;XM_013511889;XM_013511890;XM_013511891;XM_013511892;XM_013511893;XM_013511894;XM_013511895;XM_013511896;XM_013511897 XP_013367342;XP_013367343;XP_013367344;XP_013367345;XP_013367346;XP_013367347;XP_013367348;XP_013367349;XP_013367350;XP_013367351 MODEL 9064575 ncrna LOC102015565 uncharacterized LOC102015565 NW_004955533 708206 712745 - 102015565 AGCD01070326;GBCQ01050607;XR_264739 MODEL 8959313 ncrna LOC102012948 uncharacterized LOC102012948 NW_004955469 10456258 10462046 - 102012948 AGCD01052535;GBCE01121126;XR_001236982;XR_001236983;XR_263447 MODEL 9065904 protein-coding Fezf1 FEZ family zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); cell dedifferentiation (ortholog); forebrain anterior/posterior pattern specification (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hypogonadotropic hypogonadism 22 with or without anosmia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955479 3945358 3953924 - 102009944 AGCD01056312;GBDF01087471;GBDF01087472;XM_005402319;XM_005402320;XM_013503255 XP_005402376;XP_005402377;XP_013358709 MODEL 8728929 ncrna LOC102009823 uncharacterized LOC102009823 NW_004955468 7108012 7122808 + 102009823 AGCD01051995;AGCD01051996;GBDF01128606;XR_001236944;XR_001236945;XR_263399;XR_263400;XR_263401 MODEL 8735224 ncrna LOC102019414 uncharacterized LOC102019414 NW_004955504 6797808 6800456 + 102019414 AGCD01064930;GBDJ01316295;XR_264297 MODEL 9026158 ncrna LOC102011320 uncharacterized LOC102011320 NW_004955485 7682452 7684730 - 102011320 AGCD01058670;GBCB01006341;XR_263922 MODEL 39131763 rrna 5S_rRNA 5S ribosomal RNA 9032292 protein-coding LOC102009408 von Ebner gland protein 1-like NW_004955513 2571693 2576942 + 102009408 AGCD01066882;GBBH01002065;XM_005408419 XP_005408476 MODEL 8928785 protein-coding Ephb1 EPH receptor B1 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); protein tyrosine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); camera-type eye morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH aortic dissection (ortholog); autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) NW_004955501 3424112 3821727 - 102020266 AGCD01064105;AGCD01064106;GBDF01113237;XM_005406784 XP_005406841 MODEL 8859322 protein-coding LOC102011799 uncharacterized LOC102011799 NW_004955524 3971442 3983883 + 102011799 AGCD01068941;GBDK01315273;XM_005409534;XM_013507300;XM_013507301 XP_005409591;XP_013362754;XP_013362755 MODEL 8820473 pseudo LOC102014460 protein IWS1 homolog NW_004955494 8473923 8484298 + 102014460 AGCD01061585 MODEL 8890532 protein-coding LOC102013346 carcinoembryonic antigen-related cell adhesion molecule 1-like NW_004955555 1051737 1061066 - 102013346 AGCD01073056;AGCD01073057;GBDJ01174557;XM_005412433 XP_005412490 MODEL 8817138 protein-coding Ctps1 CTP synthase 1 ENCODES a protein that exhibits CTP synthase activity (ortholog); histone H1N76/N77 asparagine deamidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN B cell proliferation (ortholog); CTP biosynthetic process (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH biliary tract benign neoplasm (ortholog); immunodeficiency 24 (ortholog); Nasopharyngeal Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoophidium (ortholog); cytoplasm (ortholog) NW_004955537 773664 811084 + 102005415 AGCD01070874;AGCD01070875;GBDI01217608;XM_005410582;XM_005410584;XM_005410585 XP_005410639;XP_005410641;XP_005410642 MODEL 39133970 misc_rna 7SK 7SK RNA 8735729 pseudo LOC102009049 vascular endothelial zinc finger 1 pseudogene NW_004955476 8879444 8880316 - 102009049 AGCD01055375 MODEL 8997383 pseudo LOC102016674 activated RNA polymerase II transcriptional coactivator p15 pseudogene NW_004955459 9583079 9610377 - 102016674 AGCD01048161;AGCD01048162;AGCD01048163 MODEL 8969000 pseudo LOC102020442 E3 ubiquitin-protein ligase Mdm2 pseudogene NW_004955415 10720955 10722285 - 102020442 AGCD01016138 MODEL 10065713 ncrna LOC106150011 uncharacterized LOC106150011 NW_004955460 8135802 8142315 - 106150011 AGCD01048512;GBDJ01299914;XR_001236532;XR_001236533 MODEL 39131539 protein-coding C1QTNF6 C1q and TNF related 6 8763919 pseudo LOC102017827 dnaJ homolog subfamily A member 1 pseudogene NW_004955448 18477355 18478527 + 102017827 AGCD01041746 MODEL 8997684 ncrna LOC102024629 uncharacterized LOC102024629 NW_004955450 2617199 2624097 + 102024629 AGCD01042389;AGCD01042390;AGCD01042391;GBDF01074668;XR_001235839 MODEL 9026957 protein-coding CUNH6orf136 chromosome unknown C6orf136 homolog NW_004955583 653994 657385 + 102017723 AGCD01075845;AGCD01075846;GBCB01006587;GBDI01062201;XM_013509801 XP_013365255 MODEL 8960374 protein-coding Anxa13 annexin A13 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of Golgi to plasma membrane protein transport (ortholog); positive regulation of Golgi to plasma membrane protein transport (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); exocytic vesicle (ortholog) NW_004955540 2482499 2561569 - 102005508 AGCD01071321;GBDF01252876;XM_005410935;XM_005410936;XM_005410937;XM_013507926 XP_005410992;XP_005410993;XP_005410994;XP_013363380 MODEL 8756219 ncrna LOC102010568 uncharacterized LOC102010568 NW_004955413 250256 256400 + 102010568 AGCD01013452;AGCD01013453;GBDF01303978;XR_260042 MODEL 8736953 protein-coding Hyal4 hyaluronidase 4 ENCODES a protein that exhibits chondroitin hydrolase activity (ortholog); hyalurononglucosaminidase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan catabolic process (ortholog); FOUND IN cell surface (ortholog); lysosome (ortholog) NW_004955479 5355667 5364092 + 102021657 AGCD01056348;GBDK01199344;XM_005402453 XP_005402510 MODEL 8883340 protein-coding Acp5 acid phosphatase 5, tartrate resistant ENCODES a protein that exhibits acid phosphatase activity (ortholog); ferric iron binding (ortholog); ferrous iron binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); bone resorption (ortholog); cellular response to zinc ion starvation (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); Combined Immunodeficiency with Autoimmunity and Spondylometaphyseal Dysplasia (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular space (ortholog); lysosome (ortholog) NW_004955495 2418113 2421181 + 102026992 AGCD01061772;GBCB01039042;GBDI01008532;XM_013505121 XP_013360575 MODEL 8791245 protein-coding Dll1 delta like canonical Notch ligand 1 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN astrocyte development (ortholog); cell-cell signaling (ortholog); cerebellar molecular layer formation (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Breast Neoplasms (ortholog); chronic pancreatitis (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955411 3478943 3486541 + 102017105 AGCD01011552;GBDK01317392;XM_005377625 XP_005377682 MODEL 8871664 ncrna LOC102020795 uncharacterized LOC102020795 NW_004955472 1467889 1468164 - 102020795 AGCD01053394;GBCQ01096208;XR_263544 MODEL 8905923 protein-coding Igsf8 immunoglobulin superfamily member 8 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of cell migration (ortholog); regulation of cell motility (ortholog); FOUND IN axon (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); membrane (ortholog) NW_004955468 11877369 11883962 - 102013814 AGCD01052139;GBDI01182195;XM_005400193 XP_005400250 MODEL 8714451 pseudo LOC102003947 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955408 862783 863268 + 102003947 AGCD01007937 MODEL 8897503 ncrna LOC102021918 uncharacterized LOC102021918 NW_004955438 17912640 17920107 - 102021918 AGCD01035456;XR_261946 MODEL 8868704 pseudo LOC102008654 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 pseudogene NW_004955516 2082890 2085194 + 102008654 AGCD01067447 MODEL 8781077 protein-coding Elavl3 ELAV like RNA binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) NW_004955495 2338939 2360843 - 102025374 AGCD01061767;AGCD01061768;GBDF01254190;XM_005405670;XM_005405671 XP_005405727;XP_005405728 MODEL 39131765 rrna 5S_rRNA 5S ribosomal RNA 8966816 protein-coding Kars1 lysyl-tRNA synthetase 1 ENCODES a protein that exhibits amino acid binding (ortholog); ATP binding (ortholog); ATP:ADP adenylyltransferase activity (ortholog); INVOLVED IN basophil activation involved in immune response (ortholog); diadenosine tetraphosphate biosynthetic process (ortholog); ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 89 (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955484 1924523 1939777 + 102017340 AGCD01058073;GBDF01000398;XM_005403435;XM_005403436 XP_005403492;XP_005403493 MODEL 8784197 protein-coding Kctd6 potassium channel tetramerization domain containing 6 ENCODES a protein that exhibits ankyrin binding (ortholog); cullin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); ubiquitin-dependent protein catabolic process (ortholog) NW_004955430 1667385 1670203 - 102006804 AGCD01029130;GBCQ01175341;GBDK01323183;XM_013515693 XP_013371147 MODEL 8893070 protein-coding Dcdc2 doublecortin domain containing 2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN cilium assembly (ortholog); neuron migration (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive nonsyndromic deafness 66 (ortholog); chylomicron retention disease (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955483 2608063 2783872 + 102011993 AGCD01057682;AGCD01057683;AGCD01057684;AGCD01057685;AGCD01057686;AGCD01057687;AGCD01057688;AGCD01057689;GBBH01142103;XM_005403372;XM_005403373;XM_005403375 XP_005403429;XP_005403430;XP_005403432 MODEL 9020602 ncrna LOC102005782 uncharacterized LOC102005782 NW_004955410 28867225 28871620 + 102005782 AGCD01011262;AGCD01011263;GBDJ01369351;XR_259877 MODEL 8755613 ncrna LOC102014057 uncharacterized LOC102014057 NW_004955421 26557253 26572498 - 102014057 AGCD01022267;GBDK01109655;XR_260831 MODEL 8734391 protein-coding LOC102016314 toll-like receptor 11 NW_004955550 671037 682972 + 102016314 AGCD01072515;GBDF01223394;XM_005412035 XP_005412092 MODEL 8743671 protein-coding LOC102015939 apolipoprotein L3-like NW_004955413 22651953 22664939 + 102015939 AGCD01014311;AGCD01014312;GBDK01241031;XM_005379149;XM_005379150;XM_005379151;XM_005379152;XM_013511671;XM_013511672 XP_005379206;XP_005379207;XP_005379208;XP_005379209;XP_013367125;XP_013367126 MODEL 8840625 protein-coding Grm5 glutamate metabotropic receptor 5 ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); G protein-coupled receptor activity (ortholog); glutamate receptor activity (ortholog); INVOLVED IN associative learning (ortholog); cellular response to amyloid-beta (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcoholic neuropathy (ortholog); FOUND IN astrocyte projection (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955414 4424245 4919399 + 102007652 AGCD01014866;AGCD01014867;AGCD01014868;AGCD01014869;AGCD01014870;AGCD01014871;AGCD01014872;AGCD01014873;AGCD01014874;AGCD01014875;AGCD01014876;AGCD01014877;AGCD01014878;GBDF01115636;XM_005380433 XP_005380490 MODEL 9060478 protein-coding Abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type vitamin B12 transporter activity (ortholog); INVOLVED IN amygdala development (ortholog); amyloid-beta clearance (ortholog); amyloid-beta metabolic process (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); autosomal dominant nonsyndromic deafness (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955442 729322 858826 + 102027792 AGCD01037429;GBDF01153989;XM_005391080 XP_005391137 MODEL 8796704 protein-coding Anxa2 annexin A2 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); bone sialoprotein binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); body fluid secretion (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN AnxA2-p11 complex (ortholog); basolateral plasma membrane (ortholog); cell cortex (ortholog) NW_004955450 14545586 14574161 + 102009669 AGCD01042751;AGCD01042752;GBCB01023488;GBCE01001542;XM_013518924 XP_013374378 MODEL 9023550 ncrna LOC102011323 uncharacterized LOC102011323 NW_004955422 1718157 1721300 + 102011323 AGCD01022470;GBDF01161787;XR_260843 MODEL 9011336 protein-coding LOC102019416 chromosome unknown open reading frame, human C3orf52 ASSOCIATED WITH hypotrichosis 15 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955427 12488729 12518512 + 102019416 AGCD01027216;AGCD01027217;AGCD01027218;GBCE01142565;GBDK01395430;XM_005386611 XP_005386668 MODEL 8874771 protein-coding LOC102014831 P antigen family member 3-like NW_004955543 789995 796402 + 102014831 AGCD01071601;GBDF01047202;XM_005411348;XM_005411349 XP_005411405;XP_005411406 MODEL 8874082 protein-coding Etv2 ETS variant transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); blood vessel morphogenesis (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Aortic Remodeling (ortholog); limb ischemia (ortholog); polydactyly (ortholog) NW_004955468 4857023 4859926 + 102026095 AGCD01051923;GBDF01048409;XM_013522386 XP_013377840 MODEL 8780748 protein-coding Ephb2 EPH receptor B2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; syndecan signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Anorectal Malformations (ortholog); Candidemia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955452 2844713 2986790 + 102010660 AGCD01043905;AGCD01043906;AGCD01043907;GBBH01093218;XM_005394747;XM_005394748;XM_013519671 XP_005394804;XP_005394805;XP_013375125 MODEL 39134248 misc_rna 7SK 7SK RNA 8701661 pseudo LOC102007925 calmodulin-A pseudogene NW_004955430 14879789 14880358 + 102007925 AGCD01029580;XM_005387538 MODEL 39133971 misc_rna 7SK 7SK RNA 8742100 pseudo LOC102009053 ribosome biogenesis protein BRX1 homolog pseudogene NW_004955416 27989601 28018980 - 102009053 AGCD01017623;XM_005381644;XR_260424;XR_260425;XR_260426;XR_260427;XR_260428 MODEL 39131909 rrna 5S_rRNA 5S ribosomal RNA 8798707 protein-coding Dus1l dihydrouridine synthase 1 like ENCODES a protein that exhibits tRNA-dihydrouridine16 synthase activity (ortholog); tRNA-dihydrouridine17 synthase activity (ortholog); INVOLVED IN tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955506 1097255 1104918 + 102015747 AGCD01065245;GBDF01153424;XM_005407216;XM_005407217;XM_005407218;XM_005407219 XP_005407273;XP_005407274;XP_005407275;XP_005407276 MODEL 8949791 protein-coding Elavl4 ELAV like RNA binding protein 4 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); associative learning (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH High Myopia (ortholog); hypothyroidism (ortholog); learning disability (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955464 8699142 8847289 - 102028278 AGCD01050095;AGCD01050096;AGCD01050097;GBDF01146229;XM_005398613;XM_005398615;XM_005398616;XM_005398617;XM_005398618;XM_005398619;XM_005398622 XP_005398670;XP_005398672;XP_005398673;XP_005398674;XP_005398675;XP_005398676;XP_005398679 MODEL 9065684 protein-coding LOC102013693 keratin-associated protein 13-1-like NW_004955407 29696226 29696949 - 102013693 AGCD01007613;AGCD01007614;XM_005375968 XP_005376025 MODEL 8825686 pseudo LOC102010572 methionine adenosyltransferase 2 subunit beta pseudogene NW_004955467 10161772 10163152 + 102010572 AGCD01051547 MODEL 8962839 protein-coding Inka1 inka box actin regulator 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN neural tube development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955532 1695956 1697521 + 102019430 AGCD01070198;GBCE01188453;GBCQ01178275;XM_005410222 XP_005410279 MODEL 8885489 ncrna LOC102008287 uncharacterized LOC102008287 NW_004955406 43139560 43143818 + 102008287 AGCD01006726;GBDF01122753;XR_259542 MODEL 8859607 protein-coding Kash5 KASH domain containing 5 ENCODES a protein that exhibits dynein complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); chromosome localization to nuclear envelope involved in homologous chromosome segregation (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH azoospermia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN chromosome, telomeric region (ortholog); lateral element (ortholog); meiotic nuclear membrane microtubule tethering complex (ortholog) NW_004955559 1416844 1438451 - 102018343 AGCD01073644;AGCD01073645;AGCD01073646;GBDK01220478;XM_013509050 XP_013364504 MODEL 8901591 protein-coding Fezf2 FEZ family zinc finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axonal fasciculation (ortholog); cell dedifferentiation (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog) NW_004955517 3439999 3443477 + 102025387 AGCD01067651;XM_005409044 XP_005409101 MODEL 8943424 protein-coding Cldn15 claudin 15 ENCODES a protein that exhibits paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of intestinal D-glucose absorption (ortholog); regulation of intestinal lipid absorption (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN lateral plasma membrane (ortholog); tight junction (ortholog) NW_004955456 16062044 16067612 + 102021850 AGCD01046686;AGCD01046687;GBDK01040110;XM_005396856;XM_005396857 XP_005396913;XP_005396914 MODEL 8787836 protein-coding LOC102011800 arrestin domain-containing protein 2 NW_004955524 3316609 3321314 - 102011800 AGCD01068880;AGCD01068881;GBCB01002759;GBDI01131111;XM_013507270 XP_013362724 MODEL 8956513 protein-coding Hycc1 hyccin PI4KA lipid kinase complex subunit 1 INVOLVED IN myelination (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 5 (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); neuron projection (ortholog); plasma membrane (ortholog) NW_004955410 25274360 25342112 - 102010039 AGCD01011150;AGCD01011151;GBDF01086043;XM_005377384;XM_005377387;XM_005377389;XM_013510581 XP_005377441;XP_005377444;XP_005377446;XP_013366035 MODEL 8840819 pseudo LOC102014461 MICOS complex subunit MIC26 pseudogene NW_004955423 23593368 23594181 - 102014461 AGCD01024009 MODEL 8734318 pseudo LOC102012173 60S ribosomal protein L39 pseudogene NW_004955463 13487897 13488102 + 102012173 AGCD01049868;XM_005398412 MODEL 8909439 pseudo LOC102003949 uncharacterized protein C9orf85 homolog pseudogene NW_004955409 16860918 16865775 + 102003949 AGCD01009746 MODEL 8705851 protein-coding Igsf9 immunoglobulin superfamily member 9 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); INVOLVED IN dendrite development (ortholog); homophilic cell-cell adhesion (ortholog); regulation of synapse maturation (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955468 11722716 11741622 - 102011298 AGCD01052137;GBDF01166084;XM_005400184;XM_005400186;XM_005400187 XP_005400241;XP_005400243;XP_005400244 MODEL 8802845 protein-coding Abcc10 ATP binding cassette subfamily C member 10 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN leukotriene metabolic process (ortholog); leukotriene transport (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; neviparine pharmacokinetics pathway; vinblastine pharmacodynamics pathway; ASSOCIATED WITH Recurrence (ortholog); Thyroid Neoplasms (ortholog); Zellweger syndrome (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955437 9278977 9297618 + 102008348 AGCD01034524;GBDI01283959;XM_005389768 XP_005389825 MODEL 8764586 protein-coding Anxa3 annexin A3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); phospholipase A2 inhibitor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); defense response to bacterium (ortholog); hippocampus development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); glaucoma (ortholog); Ovarian Neoplasms (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955433 2981113 3043894 + 102021162 AGCD01031408;AGCD01031409;AGCD01031410;AGCD01031411;GBCE01001166;GBCQ01036837;XM_013516133 XP_013371587 MODEL 9057264 ncrna LOC102017828 uncharacterized LOC102017828 NW_004955402 45460545 45502507 - 102017828 AGCD01001136;AGCD01001137;AGCD01001138;AGCD01001139;AGCD01001140;GBDF01236164;XR_259092 MODEL 8988024 protein-coding CUNH6orf141 chromosome unknown C6orf141 homolog INVOLVED IN blastocyst hatching (ortholog) NW_004955410 33414621 33420002 - 102029157 AGCD01011370;GBCE01002650;XM_013510688;XM_013510689;XM_013510690;XM_013510691;XM_013510692;XM_013510693 XP_013366142;XP_013366143;XP_013366144;XP_013366145;XP_013366146;XP_013366147 MODEL 8861049 protein-coding Dennd2c DENN domain containing 2C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955435 17859521 17960008 - 102019101 AGCD01033375;AGCD01033376;AGCD01033377;AGCD01033378;AGCD01033379;GBCE01080878;XM_005389001;XM_005389002;XM_013516546 XP_005389058;XP_005389059;XP_013372000 MODEL 8740862 protein-coding Kctd7 potassium channel tetramerization domain containing 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN intracellular glutamate homeostasis (ortholog); intracellular potassium ion homeostasis (ortholog); membrane hyperpolarization (ortholog); ASSOCIATED WITH epilepsy (ortholog); generalized epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955456 8627763 8637882 + 102007513 AGCD01046496;GBBH01158498;XM_005396715 XP_005396772 MODEL 8896414 pseudo LOC102009409 unconventional prefoldin RPB5 interactor 1 pseudogene NW_004955431 245211 246820 + 102009409 AGCD01029861 MODEL 8893873 protein-coding LOC102015942 palmitoyltransferase ZDHHC3-like NW_004955413 32853796 32854516 + 102015942 AGCD01014647;GBDF01053989;XM_005379523 XP_005379580 MODEL 8958241 pseudo LOC102021221 F-actin-capping protein subunit beta pseudogene NW_004955465 6283370 6300243 + 102021221 AGCD01050439;AGCD01050440 MODEL 8824129 pseudo LOC102013349 small nuclear ribonucleoprotein E pseudogene NW_004955442 15952452 15954108 + 102013349 AGCD01037888;AGCD01037889 MODEL 9042525 protein-coding Acp6 acid phosphatase 6, lysophosphatidic ENCODES a protein that exhibits lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); lysobisphosphatidic acid metabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955568 744453 764402 + 102012696 AGCD01074525;GBDK01361894;XM_005413458;XM_005413459 XP_005413515;XP_005413516 MODEL 8759849 protein-coding Crhr1 corticotropin releasing hormone receptor 1 ENCODES a protein that exhibits corticotrophin-releasing factor receptor activity (ortholog); corticotropin-releasing hormone binding (ortholog); corticotropin-releasing hormone receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); adrenal gland development (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH alcohol use disorder (ortholog); Anorexia (ortholog); anxiety disorder (ortholog); FOUND IN apical part of cell (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955478 10380185 10390838 - 102016157 AGCD01056132;GBDF01278815;XM_013503254 XP_013358708 MODEL 8784308 protein-coding Dll3 delta like canonical Notch ligand 3 ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN compartment pattern specification (ortholog); negative regulation of astrocyte differentiation (ortholog); negative regulation of neurogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH Congenital Abnormalities (ortholog); Craniofacial Abnormalities (ortholog); dysostosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 70714 78831 - 102013276 AGCD01051680;AGCD01051681;GBDF01075164;XM_005400283 XP_005400340 MODEL 9022818 ncrna LOC102011333 uncharacterized LOC102011333 NW_004955424 5069373 5154243 + 102011333 AGCD01024384;GBDF01080540;XR_001234147;XR_261043 MODEL 9007259 pseudo LOC102016675 heterogeneous nuclear ribonucleoprotein A1-like NW_004955409 22154444 22155713 - 102016675 AGCD01010022 MODEL 8892284 protein-coding LOC102019420 vomeronasal type-1 receptor 90-like NW_004955429 12493906 12494835 - 102019420 AGCD01028722;XM_005387252 XP_005387309 MODEL 39131766 rrna 5S_rRNA 5S ribosomal RNA 8748780 protein-coding Ctps2 CTP synthase 2 ENCODES a protein that exhibits CTP synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN CTP biosynthetic process (ortholog); PARTICIPATES IN de novo pyrimidine biosynthetic pathway; ASSOCIATED WITH colorectal cancer (ortholog); Laterality Defects, Autosomal Dominant (ortholog); FOUND IN cytoophidium (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) NW_004955519 1587998 1647810 + 102008448 AGCD01067900;AGCD01067901;AGCD01067902;GBCE01134676;XM_013506997;XM_013506998;XM_013506999;XM_013507000;XM_013507001 XP_013362451;XP_013362452;XP_013362453;XP_013362454;XP_013362455 MODEL 8742333 protein-coding C1qtnf7 C1q and TNF related 7 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN extracellular space (ortholog) NW_004955480 8546222 8644361 - 102018493 AGCD01056729;AGCD01056730;GBDJ01388679;XM_005402531;XM_005402532;XM_005402533 XP_005402588;XP_005402589;XP_005402590 MODEL 8992073 ncrna LOC102024632 uncharacterized LOC102024632 NW_004955403 7768326 7771700 + 102024632 AGCD01001863;GBDF01305594;XR_259161 MODEL 9002159 pseudo LOC102005784 SH2B adapter protein 1 pseudogene NW_004955464 13239686 13248332 - 102005784 AGCD01050265;XM_005398719 MODEL 8982520 protein-coding Ephb3 EPH receptor B3 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH malaria (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 22900588 22919924 - 102016275 AGCD01021213;AGCD01021214;GBDI01185928;GBDJ01230601;XM_013513587 XP_013369041 MODEL 8775529 pseudo LOC102003953 60S ribosomal protein L12 pseudogene NW_004955463 738958 739526 - 102003953 AGCD01049497 MODEL 9028218 protein-coding LOC102012951 olfactory receptor 52N2 NW_004955414 21777014 21940262 - 102012951 AGCD01015432;AGCD01015433;AGCD01015434;AGCD01015435;AGCD01015436;AGCD01015437;AGCD01015438;GBDF01075977;XM_005380109;XM_005380110;XM_005380111;XM_005380112;XM_013511697 XP_005380166;XP_005380167;XP_005380168;XP_005380169;XP_013367151 MODEL 8718652 pseudo LOC102016316 isocitrate dehydrogenase [NADP] cytoplasmic-like NW_004955442 13154777 13160551 - 102016316 AGCD01037762;AGCD01037763 MODEL 9045935 ncrna LOC102009827 uncharacterized LOC102009827 NW_004955414 26483702 26488503 - 102009827 AGCD01015645;GBCB01079189;XR_260198 MODEL 8840212 protein-coding Dcdc2b doublecortin domain containing 2B NW_004955452 10577746 10583087 + 102018556 AGCD01044280;GBBH01001035;XM_013519556;XM_013519557 XP_013375010;XP_013375011 MODEL 8867514 pseudo LOC102020798 protein tyrosine phosphatase type IVA 1 pseudogene NW_004955415 12226682 12227264 - 102020798 AGCD01016186 MODEL 8962666 ncrna LOC102010573 uncharacterized LOC102010573 NW_004955468 2472919 2491755 + 102010573 AGCD01051821;AGCD01051822;AGCD01051823;GBDF01158088;XR_263379 MODEL 8739789 protein-coding Dennd2d DENN domain containing 2D ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); FOUND IN cytosol (ortholog) NW_004955435 14744226 14764034 - 102025162 AGCD01033249;GBBH01165854;XM_005388943;XM_013516455;XM_013516456;XM_013516457;XM_013516458 XP_005389000;XP_013371909;XP_013371910;XP_013371911;XP_013371912 MODEL 8873065 pseudo LOC102020445 mortality factor 4-like protein 1 pseudogene NW_004955417 27320032 27321807 + 102020445 AGCD01018547 MODEL 8702424 ncrna LOC102014832 uncharacterized LOC102014832 NW_004955440 5909959 5927193 + 102014832 AGCD01036285;GBDF01123806;XR_001235246;XR_262009 MODEL 8920557 protein-coding Ffar1 free fatty acid receptor 1 ENCODES a protein that exhibits bioactive lipid receptor activity (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); insulin secretion (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 4626567 4627683 + 102018075 AGCD01051918;XM_005400050 XP_005400107 MODEL 8741657 protein-coding Etv3l ETS variant transcription factor 3 like NW_004955545 3121363 3132748 - 102017507 AGCD01071933;GBDI01354928;XM_005411734;XM_013508351;XM_013508352;XM_013508353;XM_013508354;XM_013508355;XM_013508356;XM_013508357;XR_001232196 XP_005411791;XP_013363805;XP_013363806;XP_013363807;XP_013363808;XP_013363809;XP_013363810;XP_013363811 MODEL 8912850 ncrna LOC102014465 uncharacterized LOC102014465 NW_004955424 8829666 8848239 - 102014465 AGCD01024481;GBDF01021512;XR_261047 MODEL 39134249 misc_rna 7SK 7SK RNA 39133972 misc_rna 7SK 7SK RNA 9060726 protein-coding LOC102009054 uncharacterized LOC102009054 NW_004955416 11049189 11057164 - 102009054 AGCD01017171;AGCD01017172;GBDF01186388;XM_005381692 XP_005381749 MODEL 8916622 protein-coding LOC102014065 guanylate-binding protein 4-like NW_004955423 5188894 5203238 + 102014065 AGCD01023556;GBDI01220545;XM_005385105;XM_005385106 XP_005385162;XP_005385163 MODEL 8780512 protein-coding Igsf9b immunoglobulin superfamily member 9B ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); positive regulation of inhibitory postsynaptic potential (ortholog); synaptic membrane adhesion (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); inhibitory synapse (ortholog) NW_004955412 34712556 34828013 - 102027734 AGCD01013391;AGCD01013392;GBBH01149995;XM_005378583;XM_013511161;XM_013511162 XP_005378640;XP_013366615;XP_013366616 MODEL 8939782 protein-coding LOC102024634 keratin-associated protein 10-11-like NW_004955728 8357 9502 - 102024634 AGCD01078208;XM_005415079 XP_005415136 MODEL 8703187 protein-coding LOC102017830 WAP four-disulfide core domain protein 18-like NW_004955451 195886 200393 + 102017830 AGCD01042928;GBCC01009398;XM_005393904;XM_005393905 XP_005393961;XP_005393962 MODEL 8984561 protein-coding Grm6 glutamate metabotropic receptor 6 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); glutamate receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1B (ortholog); congenital stationary night blindness 1C (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955408 1421132 1432010 + 102009468 AGCD01007959;GBCB01048356;XM_013507979 XP_013363433 MODEL 9007009 protein-coding LOC102008288 keratin-associated protein 20-2-like NW_004955407 30178341 30178529 + 102008288 AGCD01007628;XM_005375644 XP_005375701 MODEL 39132511 rrna 5S_rRNA 5S ribosomal RNA 8791757 ncrna LOC102008655 uncharacterized LOC102008655 NW_004955434 11901814 11906490 - 102008655 AGCD01032382;GBDF01223017;XR_001234777 MODEL 8748236 pseudo LOC102011808 THO complex subunit 5 homolog pseudogene NW_004955540 390461 391906 + 102011808 AGCD01071274 MODEL 8866129 protein-coding Inka2 inka box actin regulator 2 ENCODES a protein that exhibits protein kinase binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955435 15179883 15195457 - 102028459 AGCD01033263;GBDF01056552;XM_005388952 XP_005389009 MODEL 8896979 protein-coding Cldn16 claudin 16 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN paracellular transport (ortholog); positive regulation of calcium ion transport (ortholog); renal absorption (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hypercalciuria (ortholog); hypertension (ortholog); FOUND IN bicellular tight junction (ortholog); tight junction (ortholog) NW_004955420 17684752 17714639 - 102015526 AGCD01021026;GBDJ01338095;XM_005383225;XM_005383226 XP_005383282;XP_005383283 MODEL 8767787 protein-coding LOC102015945 E3 ubiquitin-protein ligase TRIM68 NW_004955414 20201525 20210506 - 102015945 AGCD01015362;GBDF01254273;XM_005380050 XP_005380107 MODEL 8715783 protein-coding LOC102024636 keratin-associated protein 4-3-like NW_004955451 15571355 15602825 - 102024636 AGCD01043618;AGCD01043619;AGCD01043620;AGCD01043621;XM_013519179 XP_013374633 MODEL 8990973 ncrna LOC102015566 uncharacterized LOC102015566 NW_004955534 1023182 1115440 - 102015566 AGCD01070483;AGCD01070484;AGCD01070485;AGCD01070486;AGCD01070487;GBBH01146790;XR_001232056 MODEL 8699945 protein-coding LOC102021923 malonyl-CoA decarboxylase, mitochondrial NW_004955564 281274 328682 - 102021923 AGCD01074195;AGCD01074196;AGCD01074197;AGCD01074198;GBDI01256173;XM_005413231;XM_005413232;XM_005413233;XM_005413234;XM_005413235;XM_005413236;XM_013509208 XP_005413288;XP_005413289;XP_005413290;XP_005413291;XP_005413292;XP_005413293;XP_013364662 MODEL 8910937 protein-coding Hycc2 hyccin PI4KA lipid kinase complex subunit 2 ASSOCIATED WITH Weight Gain (ortholog); FOUND IN cell junction (ortholog) NW_004955403 483671 564509 + 102025420 AGCD01001693;AGCD01001694;AGCD01001695;AGCD01001696;GBBH01118959;XM_005373218;XM_005373219;XM_005373220;XM_005373221;XM_005373222;XM_005373223;XM_005373224;XM_005373225;XM_005373226;XM_005373227 XP_005373275;XP_005373276;XP_005373277;XP_005373278;XP_005373279;XP_005373280;XP_005373281;XP_005373282;XP_005373283;XP_005373284 MODEL 8770323 protein-coding LOC102012181 G2/mitotic-specific cyclin-B1-like NW_004955413 26407831 26409562 - 102012181 AGCD01014441;XM_013511379 XP_013366833 MODEL 8956572 ncrna LOC102011336 uncharacterized LOC102011336 NW_004955500 5251418 5257274 + 102011336 AGCD01063826;GBDJ01403986;XR_001231513;XR_264228 MODEL 9065615 protein-coding LOC102007926 ATP-binding cassette sub-family G member 2-like NW_004955433 518685 589650 - 102007926 AGCD01031326;AGCD01031327;AGCD01031328;AGCD01031329;GBDJ01282723;XM_005388161 XP_005388218 MODEL 8765976 protein-coding Crhr2 corticotropin releasing hormone receptor 2 ENCODES a protein that exhibits corticotrophin-releasing factor receptor activity (ortholog); corticotropin-releasing hormone receptor activity (ortholog); hormone activity (ortholog); INVOLVED IN actin filament organization (ortholog); catecholamine biosynthetic process (ortholog); cellular response to glucocorticoid stimulus (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Anorexia (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell body fiber (ortholog) NW_004955410 31830333 31874384 - 102021636 AGCD01011333;GBCB01073043;XM_005377502;XM_005377503;XM_005377504;XM_005377505;XM_013510477;XM_013510478;XM_013510480;XM_013510481 XP_005377559;XP_005377560;XP_005377561;XP_005377562;XP_013365931;XP_013365932;XP_013365934;XP_013365935 MODEL 9063294 protein-coding LOC102019422 pancreatic triacylglycerol lipase-like NW_004955431 21351823 21373520 + 102019422 AGCD01030496;XM_005387907 XP_005387964 MODEL 8702994 protein-coding Abcc12 ATP binding cassette subfamily C member 12 ASSOCIATED WITH bone marrow disease (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955474 7166148 7238013 + 102008402 AGCD01054515;AGCD01054516;GBDF01120114;XM_005401403;XM_005401404;XM_005401405;XM_005401406 XP_005401460;XP_005401461;XP_005401462;XP_005401463 MODEL 9064871 protein-coding LOC102024639 keratin-associated protein 9-1-like NW_004955451 15671886 15690953 + 102024639 AGCD01043631;AGCD01043632;AGCD01043633;AGCD01043634;XM_013519129 XP_013374583 MODEL 8940064 pseudo LOC102005785 pleckstrin homology domain-containing family B member 2 pseudogene NW_004955411 11025058 11025724 + 102005785 AGCD01011800 MODEL 8711111 protein-coding CUNH6orf201 chromosome unknown C6orf201 homolog NW_004955465 9303368 9339691 - 102011518 AGCD01050489;AGCD01050490;GBDF01006952;XM_005398888 XP_005398945 MODEL 10076501 protein-coding C1qtnf8 C1q and TNF related 8 INVOLVED IN positive regulation of cell motility (ortholog) NW_004955442 16159901 16162152 + 106149289 AGCD01037893;XM_013517653 XP_013373107 MODEL 8898993 protein-coding Kctd8 potassium channel tetramerization domain containing 8 ENCODES a protein that exhibits obsolete G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN postsynapse (ortholog); presynaptic active zone membrane (ortholog); presynaptic membrane (ortholog) NW_004955443 3605845 3836717 + 102006620 AGCD01038197;AGCD01038198;AGCD01038199;AGCD01038200;AGCD01038201;AGCD01038202;GBDJ01115972;XM_005391914 XP_005391971 MODEL 9062925 pseudo LOC102009413 protein PBDC1 pseudogene NW_004955433 10564178 10564675 + 102009413 AGCD01031632 MODEL 9002129 protein-coding LOC102003956 beta-galactosidase-1-like protein 2 NW_004955412 35115232 35201119 + 102003956 AGCD01013400;AGCD01013401;AGCD01013402;AGCD01013403;AGCD01013404;AGCD01013405;GBDF01221467;XM_005378598 XP_005378655 MODEL 8798815 ncrna LOC102021224 uncharacterized LOC102021224 NW_004955412 26549172 26550474 - 102021224 AGCD01013194;GBDF01009694;XR_260026 MODEL 9060172 protein-coding LOC102013350 kallikrein-4-like NW_004955559 2994 9200 + 102013350 AGCD01073532;XM_013508937 XP_013364391 MODEL 39131910 rrna 5S_rRNA 5S ribosomal RNA 8977314 protein-coding Acp7 acid phosphatase 7, tartrate resistant (putative) NW_004955468 432907 452848 - 102028399 AGCD01051698;AGCD01051699;AGCD01051700;AGCD01051701;GBDJ01102501;XM_005399796;XM_005399797;XM_013522275 XP_005399853;XP_005399854;XP_013377729 MODEL 8909773 pseudo LOC102014833 S-phase kinase-associated protein 1 pseudogene NW_004955440 17972082 17972557 - 102014833 AGCD01036590 MODEL 8753307 protein-coding Dll4 delta like canonical Notch ligand 4 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve morphogenesis (ortholog); blood vessel lumenization (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 6 (ortholog) NW_004955416 7807049 7816346 + 102030417 AGCD01017013;GBCB01111083;XM_005381271 XP_005381328 MODEL 8900090 protein-coding Anxa4 annexin A4 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of interleukin-8 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) NW_004955424 15323604 15389136 - 102014261 AGCD01024706;AGCD01024707;AGCD01024708;AGCD01024709;AGCD01024710;GBDF01015085;XM_005385639 XP_005385696 MODEL 8751770 protein-coding LOC102013694 olfactory receptor 6C6-like NW_004955458 2486054 2487013 + 102013694 AGCD01047234;XM_005397242 XP_005397299 MODEL 8811939 protein-coding Dus2 dihydrouridine synthase 2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); FMN binding (ortholog); NADPH binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); tRNA dihydrouridine synthesis (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955484 8564015 8609987 - 102011008 AGCD01058393;GBDJ01422933;XM_005403588;XM_013503874;XM_013503875;XM_013503876;XM_013503877;XM_013503878 XP_005403645;XP_013359328;XP_013359329;XP_013359330;XP_013359331;XP_013359332 MODEL 8902331 protein-coding Elf1 E74 like ETS transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955404 50952907 51020229 - 102011078 AGCD01004541;AGCD01004542;GBDK01235415;XM_005374217;XM_013516770 XP_005374274;XP_013372224 MODEL 8754230 protein-coding LOC102016318 myeloid cell surface antigen CD33-like NW_004955558 1147710 1153953 - 102016318 AGCD01073420;GBBH01177427;XM_005412696 XP_005412753 MODEL 8871315 protein-coding Kat14 lysine acetyltransferase 14 ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN ATAC complex (ortholog); nucleus (ortholog) NW_004955415 26872095 26895009 + 102012957 AGCD01016610;AGCD01016611;GBDF01291273;XM_005380916;XM_005380917;XM_005380919 XP_005380973;XP_005380974;XP_005380976 MODEL 9022768 protein-coding LOC102009828 olfactory receptor 52N2-like NW_004955414 21765507 21766469 + 102009828 AGCD01015432;XM_005380503 XP_005380560 MODEL 8811238 pseudo LOC102010574 sodium channel modifier 1 pseudogene NW_004955413 9333530 9334670 - 102010574 AGCD01013903 MODEL 8734376 protein-coding Dcdc2c doublecortin domain containing 2C ASSOCIATED WITH methylmalonic aciduria and homocystinuria type cblC (ortholog); FOUND IN cytoplasm (ortholog); sperm end piece (ortholog); sperm flagellum (ortholog) NW_004955487 3698708 3756669 - 102016276 AGCD01059292;AGCD01059293;GBDF01051361;XM_005404368;XM_013504342;XM_013504343;XR_001231153;XR_001231154 XP_005404425;XP_013359796;XP_013359797 MODEL 8877012 pseudo LOC102005786 transcription elongation factor B polypeptide 1 pseudogene NW_004955412 19308345 19308746 + 102005786 AGCD01012950;XM_005378228 MODEL 8743547 protein-coding LOC102008662 uncharacterized LOC102008662 NW_004955538 2203100 2223177 - 102008662 AGCD01071109;GBDK01307063;XM_013507815;XM_013507816;XM_013507817 XP_013363269;XP_013363270;XP_013363271 MODEL 39132513 rrna 5S_rRNA 5S ribosomal RNA 9031359 protein-coding Dennd3 DENN domain containing 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog) NW_004955454 185299 253935 + 102020306 AGCD01044945;AGCD01044946;AGCD01044947;AGCD01044948;AGCD01044949;GBDJ01317334;GBDK01081145;XM_013520212 XP_013375666 MODEL 8735700 protein-coding Ctr9 CTR9 component of Paf1/RNA polymerase II complex ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN blastocyst growth (ortholog); blastocyst hatching (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary Wilms' tumor (ortholog); Hypertelorism (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) NW_004955414 26347508 26373726 + 102008715 AGCD01015641;GBDF01125431;XM_005380285 XP_005380342 MODEL 8745311 protein-coding Ino80 INO80 complex ATPase subunit ENCODES a protein that exhibits alpha-tubulin binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH epilepsy (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN cytosol (ortholog); Ino80 complex (ortholog); nuclear body (ortholog) NW_004955416 7870521 8020862 - 102003865 AGCD01017017;AGCD01017018;AGCD01017019;AGCD01017020;AGCD01017021;AGCD01017022;GBCE01141933;XM_005381275;XM_005381276;XM_013512574 XP_005381332;XP_005381333;XP_013368028 MODEL 39133973 misc_rna 7SK 7SK RNA 8935556 protein-coding LOC102003957 asialoglycoprotein receptor 2 NW_004955467 9753634 9773834 + 102003957 AGCD01051524;GBDJ01193720;XM_005399561;XM_005399562;XM_005399563;XM_005399564;XM_005399565;XM_005399566;XM_005399567;XM_013522259;XM_013522260;XM_013522261;XM_013522262;XM_013522263;XM_013522264;XM_013522265 XP_005399618;XP_005399619;XP_005399620;XP_005399621;XP_005399622;XP_005399623;XP_005399624;XP_013377713;XP_013377714;XP_013377715;XP_013377716;XP_013377717;XP_013377718;XP_013377719 MODEL 39134250 misc_rna 7SK 7SK RNA 8717872 protein-coding LOC102012953 olfactory receptor 491-like NW_004955414 23663348 23664286 - 102012953 AGCD01015514;XM_013511761 XP_013367215 MODEL 8914199 protein-coding LOC102014467 male-specific submandibular salivary gland protein-like NW_004955499 3108426 3113958 + 102014467 AGCD01063454;GBBH01002408;XM_005406528 XP_005406585 MODEL 8753437 pseudo LOC102011337 transcription elongation factor B polypeptide 1 pseudogene NW_004955502 352527 352808 - 102011337 AGCD01064237;XM_005406918 MODEL 8947013 ncrna LOC102014067 uncharacterized LOC102014067 NW_004955425 2457947 2463823 + 102014067 AGCD01025263;GBDF01147077;XR_261121 MODEL 8976072 protein-coding Crim1 cysteine rich transmembrane BMP regulator 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of osteoblast differentiation (ortholog) NW_004955441 4275411 4420537 + 102010949 AGCD01036837;AGCD01036838;AGCD01036839;GBDJ01075654;XM_013517514 XP_013372968 MODEL 9054062 protein-coding Dennd4a DENN domain containing 4A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway NW_004955450 9723234 9851303 + 102003506 AGCD01042596;AGCD01042597;AGCD01042598;AGCD01042599;AGCD01042600;GBDI01262700;XM_005393707;XM_005393708;XM_005393709;XM_005393710;XM_005393711;XM_005393712;XM_005393713 XP_005393764;XP_005393765;XP_005393766;XP_005393767;XP_005393768;XP_005393769;XP_005393770 MODEL 8984106 pseudo LOC102020801 L-lactate dehydrogenase A chain-like NW_004955478 2250857 2252297 + 102020801 AGCD01055787 MODEL 8997399 protein-coding Abcc2 ATP binding cassette subfamily C member 2 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN antibiotic metabolic process (ortholog); benzylpenicillin metabolic process (ortholog); bile acid and bile salt transport (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); alopecia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) NW_004955507 5724788 5791281 + 102018421 AGCD01065688;GBCQ01067528;XM_005407678 XP_005407735 MODEL 8749377 protein-coding Ihh Indian hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); patched binding (ortholog); very-low-density lipoprotein particle binding (ortholog); INVOLVED IN bone resorption (ortholog); branching involved in blood vessel morphogenesis (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acrocapitofemoral dysplasia (ortholog); annular pancreas (ortholog); autism spectrum disorder (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955453 14376665 14382536 + 102024084 AGCD01044864;GBCQ01087658;XM_005395596 XP_005395653 MODEL 8897304 protein-coding LOC102016679 60S ribosomal protein L37a-like NW_004955410 31283753 31284723 - 102016679 AGCD01011320;XM_005377486 XP_005377543 MODEL 8891459 ncrna LOC102011810 uncharacterized LOC102011810 NW_004955440 4672850 4697012 - 102011810 AGCD01036266;GBDF01015047;XR_262004 MODEL 8747588 pseudo LOC102009415 cell division cycle and apoptosis regulator protein 1 pseudogene NW_004955434 8711959 8714535 + 102009415 AGCD01032265 MODEL 8782082 protein-coding C1r complement C1r ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); zymogen activation (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome periodontal type 1 (ortholog); Ehlers-Danlos syndrome periodontal type 2 (ortholog); FOUND IN complement component C1 complex (ortholog); extracellular space (ortholog); symbiont cell surface (ortholog) NW_004955413 4652156 4660897 - 102011752 AGCD01013623;GBCE01007078;XM_005378856 XP_005378913 MODEL 8872183 protein-coding Kat2a lysine acetyltransferase 2A ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN alpha-tubulin acetylation (ortholog); cell population proliferation (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN histone modification pathway; p53 signaling pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH hepatitis B (ortholog); lung non-small cell carcinoma (ortholog); neural tube defect (ortholog); FOUND IN ATAC complex (ortholog); centrosome (ortholog); chromatin (ortholog) NW_004955451 16192228 16197103 - 102013137 AGCD01043658;GBBH01163332;GBCQ01066649;XM_013519392 XP_013374846 MODEL 8850923 protein-coding Ffar3 free fatty acid receptor 3 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to fatty acid (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH essential hypertension (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955468 4627686 4634499 + 102018377 AGCD01051918;AGCD01051919;XM_005400051 XP_005400108 MODEL 8919921 pseudo LOC102021225 ubiquitin domain-containing protein UBFD1 pseudogene NW_004955466 9782657 9783494 - 102021225 AGCD01051055 MODEL 39131911 rrna 5S_rRNA 5S ribosomal RNA 8830870 ncrna LOC102021929 uncharacterized LOC102021929 NW_004955597 320901 337898 + 102021929 AGCD01076554;GBDF01041765;XR_001232548 MODEL 9037414 protein-coding Etv4 ETS variant transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); motor neuron axon guidance (ortholog); negative regulation of mammary gland epithelial cell proliferation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Neoplasm Metastasis (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955451 16965404 16976503 - 102004880 AGCD01043714;AGCD01043715;GBBH01050865;GBBH01050866;XM_013519235;XM_013519236 XP_013374689;XP_013374690 MODEL 8717167 ncrna LOC102007929 uncharacterized LOC102007929 NW_004955435 5612861 5627141 + 102007929 AGCD01032892;AGCD01032893;GBDF01113740;XR_261663 MODEL 8757363 protein-coding Acr acrosin ENCODES a protein that exhibits amidase activity (ortholog); D-mannose binding (ortholog); fucose binding (ortholog); INVOLVED IN acrosome matrix dispersal (ortholog); acrosome reaction (ortholog); activation of adenylate cyclase activity (ortholog); ASSOCIATED WITH spermatogenic failure 87 (ortholog); FOUND IN acrosomal vesicle (ortholog); Golgi-associated vesicle (ortholog); protein-containing complex (ortholog) NW_004955413 33721984 33728088 + 102009368 AGCD01014688;GBDJ01305187;XM_005379598 XP_005379655 MODEL 9034568 protein-coding Dchs1 dachsous cadherin-related 1 INVOLVED IN anatomical structure morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cell migration (ortholog); ASSOCIATED WITH CAKUT (ortholog); cardiomyopathy (ortholog); congenital heart disease (ortholog); FOUND IN apical part of cell (ortholog) NW_004955414 22331590 22365761 - 102011111 AGCD01015453;AGCD01015454;AGCD01015455;GBBH01172650;GBCB01010159;XM_013512060;XM_013512061 XP_013367514;XP_013367515 MODEL 8933390 pseudo LOC102024640 SLAIN motif-containing protein 2 pseudogene NW_004955404 30188761 30197752 + 102024640 AGCD01004000 MODEL 9054408 protein-coding LOC102017831 protocadherin alpha-4-like NW_004955611 288464 291968 + 102017831 AGCD01077159;XM_013510123 XP_013365577 MODEL 8845557 ncrna LOC102008291 uncharacterized LOC102008291 NW_004955408 21058606 21068901 - 102008291 AGCD01008549;GBBH01016936;XR_001232367 MODEL 8749819 protein-coding Grm7 glutamate metabotropic receptor 7 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); adenylate cyclase inhibitor activity (ortholog); calcium channel regulator activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult behavior (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN asymmetric synapse (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955421 5723662 6542557 - 102016388 AGCD01021724;AGCD01021725;AGCD01021726;AGCD01021727;AGCD01021728;AGCD01021729;AGCD01021730;AGCD01021731;AGCD01021732;AGCD01021733;AGCD01021734;AGCD01021735;AGCD01021736;AGCD01021737;GBDJ01375281;XM_005383736;XM_005383738;XR_001233876 XP_005383793;XP_005383795 MODEL 8723386 protein-coding CUNH7orf25 chromosome unknown C7orf25 homolog FOUND IN nucleoplasm (ortholog) NW_004955460 895201 897703 + 102013148 AGCD01048350;GBDF01090066;XM_005397716;XM_005397717;XM_005397720;XM_013521293 XP_005397773;XP_005397774;XP_005397777;XP_013376747 MODEL 8734472 protein-coding LOC102020447 olfactory receptor 56-like NW_004955418 30024353 30025291 - 102020447 AGCD01019497;XM_005382333 XP_005382390 MODEL 8848332 pseudo LOC102015946 high mobility group protein B1 pseudogene NW_004955414 23934137 23936821 + 102015946 AGCD01015531 MODEL 9013733 protein-coding Cldn17 claudin 17 ENCODES a protein that exhibits channel activity (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN cellular respiration (ortholog); gene expression (ortholog); inflammatory response (ortholog); FOUND IN plasma membrane (ortholog); tight junction (ortholog) NW_004955407 29519400 29520625 - 102028380 AGCD01007609;GBDI01212283;XM_005375623 XP_005375680 MODEL 8835493 ncrna LOC102013351 uncharacterized LOC102013351 NW_004955444 12343789 12350586 + 102013351 AGCD01039069;GBCE01054272;XR_262262;XR_262263 MODEL 8947631 pseudo LOC102017837 uncharacterized LOC102017837 NW_004955404 7713697 7732135 - 102017837 AGCD01003342 MODEL 8795416 protein-coding Dchs2 dachsous cadherin-related 2 INVOLVED IN condensed mesenchymal cell proliferation (ortholog); nephron development (ortholog); ASSOCIATED WITH Multiple Abnormalities (ortholog); prostate cancer (ortholog) NW_004955471 8485532 8707033 - 102007329 AGCD01053187;AGCD01053188;AGCD01053189;AGCD01053190;AGCD01053191;GBCE01061980;XM_005400929 XP_005400986 MODEL 8838226 pseudo LOC102012184 U1 small nuclear ribonucleoprotein A pseudogene NW_004955413 587042 587756 + 102012184 AGCD01013481 MODEL 8792405 pseudo LOC102009055 60S ribosomal protein L24 pseudogene NW_004955481 3914939 3917042 - 102009055 AGCD01056922 MODEL 39132515 rrna 5S_rRNA 5S ribosomal RNA 10335659 ncrna LOC106150012 uncharacterized LOC106150012 NW_004955402 9171471 9172006 - 106150012 AGCD01000207;GBCE01046074;XR_001236539 MODEL 8842618 pseudo LOC102019436 60 kDa heat shock protein, mitochondrial pseudogene NW_004955439 9837307 9839540 - 102019436 AGCD01035844 MODEL 8993531 protein-coding Ctrc chymotrypsin C ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); proteolysis (ortholog); ASSOCIATED WITH chronic pancreatitis (ortholog); Hereditary Pancreatitis (ortholog) NW_004955527 2714001 2719598 - 102013445 AGCD01069464;GBCQ01015982;XM_005409874 XP_005409931 MODEL 8860198 pseudo LOC102012954 SAP domain-containing ribonucleoprotein pseudogene NW_004955472 1335239 1335980 - 102012954 AGCD01053386 MODEL 9022218 protein-coding Anxa5 annexin A5 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); P-type calcium transporter activity (ortholog); INVOLVED IN cellular response to gonadotropin-releasing hormone (ortholog); cellular response to lead ion (ortholog); negative regulation of blood coagulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN axon terminus (ortholog); cell projection (ortholog); dendrite (ortholog) NW_004955428 18873782 18907955 + 102019417 AGCD01028073;AGCD01028074;GBCC01000191;GBCE01120920;XM_005386786 XP_005386843 MODEL 8767731 ncrna LOC102013696 uncharacterized LOC102013696 NW_004955458 6091649 6099840 + 102013696 AGCD01047549;GBDF01304210;XR_262985 MODEL 8869965 protein-coding Acrbp acrosin binding protein INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); Prostatic Neoplasms (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); extracellular region (ortholog) NW_004955413 4251608 4262095 - 102024780 AGCD01013604;GBCQ01012794;XM_005378808 XP_005378865 MODEL 8804181 ncrna LOC102009829 uncharacterized LOC102009829 NW_004955415 3199565 3227325 + 102009829 AGCD01015927;GBDF01041582;XR_260260;XR_260261 MODEL 8828799 pseudo LOC102011339 actin filament-associated protein 1-like 2 pseudogene NW_004955503 4487948 4488394 + 102011339 AGCD01064669 MODEL 8841114 protein-coding Dus3l dihydrouridine synthase 3 like ENCODES a protein that exhibits mRNA dihydrouridine synthase activity (ortholog); tRNA-dihydrouridine47 synthase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA dihydrouridine synthesis (ortholog) NW_004955495 3653613 3660331 + 102022937 AGCD01061874;GBBH01166430;XM_005405754;XM_005405755;XM_005405756;XM_005405757;XM_005405758;XM_013505195 XP_005405811;XP_005405812;XP_005405813;XP_005405814;XP_005405815;XP_013360649 MODEL 8762230 pseudo LOC102015568 PHD finger-like domain-containing protein 5A pseudogene NW_004955437 21029054 21029994 - 102015568 AGCD01034895 MODEL 8875498 pseudo LOC102010575 60S ribosomal protein L19 pseudogene NW_004955414 19517744 19518919 - 102010575 AGCD01015321 MODEL 8893591 protein-coding Hydin HYDIN axonemal central pair apparatus protein INVOLVED IN axonemal central apparatus assembly (ortholog); brain development (ortholog); cilium movement (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN axonemal central apparatus (ortholog); axonemal central pair projection (ortholog); cilium (ortholog) NW_004955484 3567896 3948807 - 102007343 AGCD01058183;AGCD01058184;AGCD01058185;AGCD01058186;AGCD01058187;AGCD01058188;AGCD01058189;AGCD01058190;AGCD01058191;AGCD01058192;AGCD01058193;AGCD01058194;AGCD01058195;AGCD01058196;AGCD01058197;GBCE01141557;XM_013503969;XM_013503970;XM_013503971;XM_013503972 XP_013359423;XP_013359424;XP_013359425;XP_013359426 MODEL 8818950 protein-coding CUNH8orf33 chromosome unknown C8orf33 homolog NW_004955454 3515898 3518046 + 102021306 AGCD01045086;GBDF01249616;XM_005395940;XM_005395941 XP_005395997;XP_005395998 MODEL 8835267 protein-coding LOC102008663 butyrophilin subfamily 3 member A1-like NW_004955437 1060528 1076067 + 102008663 AGCD01034189;XM_013516725 XP_013372179 MODEL 9012675 ncrna LOC102017839 uncharacterized LOC102017839 NW_004955405 39617278 39622813 - 102017839 AGCD01005502;GBDF01252390;XR_001235917 MODEL 39133974 misc_rna 7SK 7SK RNA 8707694 protein-coding Kat2b lysine acetyltransferase 2B ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to oxidative stress (ortholog); cellular response to parathyroid hormone stimulus (ortholog); PARTICIPATES IN cortisol signaling pathway; histone modification pathway; p53 signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Coronary Disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN A band (ortholog); actomyosin (ortholog); ATAC complex (ortholog) NW_004955430 12109493 12196102 + 102005162 AGCD01029488;AGCD01029489;GBDF01081550;XM_005387463;XM_005387464;XM_013515665;XM_013515666 XP_005387520;XP_005387521;XP_013371119;XP_013371120 MODEL 39134251 misc_rna 7SK 7SK RNA 9026201 ncrna LOC102016320 uncharacterized LOC102016320 NW_004955443 16490629 16501985 + 102016320 AGCD01038569;GBDF01114412;XR_262211 MODEL 9050547 ncrna LOC102014470 uncharacterized LOC102014470 NW_004955426 7373162 7386158 + 102014470 AGCD01026193;GBDJ01377004;XR_261195 MODEL 39131767 rrna 5S_rRNA 5S ribosomal RNA 8853605 pseudo LOC102014068 60S ribosomal protein L12-like NW_004955425 932011 934034 - 102014068 AGCD01025206 MODEL 8802281 protein-coding Elf2 E74 like ETS transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cerebellar ataxia, neuropathy, and vestibular areflexia syndrome (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955428 4458962 4550783 + 102020823 AGCD01027693;AGCD01027694;AGCD01027695;GBDI01140584;XM_005386699;XM_005386701;XM_005386702;XM_005386703;XM_013515278;XM_013515279;XM_013515280;XM_013515281;XM_013515282;XM_013515283;XM_013515284;XM_013515285;XM_013515286 XP_005386756;XP_005386758;XP_005386759;XP_005386760;XP_013370732;XP_013370733;XP_013370734;XP_013370735;XP_013370736;XP_013370737;XP_013370738;XP_013370739;XP_013370740 MODEL 8753675 protein-coding LOC102020806 olfactory receptor 14I1 NW_004955418 30137608 30139452 - 102020806 AGCD01019506;XM_005382334 XP_005382391 MODEL 8895370 protein-coding Crip1 cysteine rich protein 1 ENCODES a protein that exhibits peptide binding (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to antibiotic (ortholog); cellular response to UV-B (ortholog); immune response (ortholog); FOUND IN cytoplasm (ortholog) NW_004955538 3683747 3686468 + 102009760 AGCD01071175;GBBH01002381;XM_005410877 XP_005410934 MODEL 8843691 protein-coding LOC102005787 olfactory receptor 147-like NW_004955412 25191307 25192245 + 102005787 AGCD01013140;XM_005378415 XP_005378472 MODEL 8920595 pseudo LOC102020449 methylosome subunit pICln pseudogene NW_004955485 2203892 2204592 - 102020449 AGCD01058508 MODEL 8860548 protein-coding Abcc3 ATP binding cassette subfamily C member 3 ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); canalicular bile acid transport (ortholog); leukotriene transport (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; etoposide pharmacodynamics pathway; etoposide pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955451 11087246 11130108 - 102003194 AGCD01043342;GBDJ01086374;XM_005394128;XM_005394129 XP_005394185;XP_005394186 MODEL 8766851 protein-coding Iho1 interactor of HORMAD1 1 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); FOUND IN condensed nuclear chromosome (ortholog) NW_004955532 1198316 1226875 + 102007590 AGCD01070171;AGCD01070172;AGCD01070173;GBDF01126604;GBDF01126605;XM_013507565 XP_013363019 MODEL 8768499 pseudo LOC102014834 GTP-binding nuclear protein Ran-like NW_004955441 9343031 9353957 + 102014834 AGCD01037018;AGCD01037019 MODEL 8974237 protein-coding Grm8 glutamate metabotropic receptor 8 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); glutamate receptor activity (ortholog); group III metabotropic glutamate receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955479 7520537 8279942 - 102019168 AGCD01056414;AGCD01056415;AGCD01056416;AGCD01056417;AGCD01056418;AGCD01056419;AGCD01056420;AGCD01056421;AGCD01056422;AGCD01056423;AGCD01056424;AGCD01056425;AGCD01056426;AGCD01056427;AGCD01056428;AGCD01056429;AGCD01056430;AGCD01056431;GBDI01207199;XM_005402348;XM_005402349;XM_005402350;XM_005402351;XM_005402352 XP_005402405;XP_005402406;XP_005402407;XP_005402408;XP_005402409 MODEL 8905111 pseudo LOC102013356 coiled-coil domain-containing protein 152-like NW_004955402 14247257 14248568 + 102013356 AGCD01000422 MODEL 9044426 protein-coding C1rl complement C1r subcomponent like FOUND IN extracellular space (ortholog) NW_004955413 4663643 4670454 - 102012081 AGCD01013623;GBDI01312342;XM_005378857;XM_005378858 XP_005378914;XP_005378915 MODEL 8997016 pseudo LOC102003958 epithelial cell adhesion molecule pseudogene NW_004955413 7190271 7195075 - 102003958 AGCD01013804 MODEL 8895475 protein-coding Dlst dihydrolipoamide S-succinyltransferase ENCODES a protein that exhibits acyltransferase activity (ortholog); dihydrolipoyllysine-residue succinyltransferase activity (ortholog); heat shock protein binding (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Hereditary Paraganglioma-Pheochromocytoma Syndromes (ortholog); oxoglutarate dehydrogenase deficiency (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955523 660413 680878 - 102011235 AGCD01068474;AGCD01068475;GBBH01064906;GBDJ01128538;XM_013507173 XP_013362627 MODEL 8936003 protein-coding Ino80b INO80 complex subunit B INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN Ino80 complex (ortholog); nuclear body (ortholog); nucleolus (ortholog) NW_004955424 11324741 11327466 - 102021896 AGCD01024563;GBCE01116801;XM_013514657 XP_013370111 MODEL 8816780 ncrna LOC102019438 uncharacterized LOC102019438 NW_004955441 14696516 14714360 + 102019438 AGCD01037214;AGCD01037215;AGCD01037216;GBDF01130381;XR_262081 MODEL 8833652 protein-coding LOC102007940 NKG2D ligand 1-like NW_004955439 11374237 11379696 + 102007940 AGCD01035901;AGCD01035902;AGCD01035903;GBCE01111523;GBDK01115668;XM_013517300 XP_013372754 MODEL 10085710 ncrna LOC106150015 uncharacterized LOC106150015 NW_004955460 152469 155457 + 106150015 AGCD01048337;GBDK01160015;XR_001236537 MODEL 8817522 protein-coding Kctd9 potassium channel tetramerization domain containing 9 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell maturation (ortholog); gene expression (ortholog); natural killer cell degranulation (ortholog) NW_004955403 48349349 48373903 - 102024523 AGCD01002917;AGCD01002918;GBDF01157051;XM_005373718;XM_013514111 XP_005373775;XP_013369565 MODEL 39133975 misc_rna 7SK 7SK RNA 8954781 protein-coding Ctrl chymotrypsin like ENCODES a protein that exhibits peptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN extracellular space (ortholog) NW_004955484 8781928 8783929 + 102019917 AGCD01058396;GBDJ01138415;XM_005403613 XP_005403670 MODEL 8827258 pseudo LOC102013697 DNA-directed RNA polymerase II subunit RPB3 pseudogene NW_004955409 29619602 29621572 + 102013697 AGCD01010277 MODEL 8738925 pseudo LOC102009416 60S ribosomal protein L13 pseudogene NW_004955435 16416187 16416933 - 102009416 AGCD01033326;XR_261708 MODEL 8814297 ncrna LOC102009839 uncharacterized LOC102009839 NW_004955418 27098258 27125846 - 102009839 AGCD01019403;GBDK01371466;XR_001233544;XR_001233545;XR_001233546;XR_260585 MODEL 8928059 protein-coding LOC102015947 olfactory receptor 478 NW_004955414 23520391 23521359 - 102015947 AGCD01015501;XM_005380518 XP_005380575 MODEL 8706552 pseudo LOC102010577 fatty acid-binding protein, epidermal pseudogene NW_004955414 14243606 14244127 + 102010577 AGCD01015144 MODEL 8892715 protein-coding Dus4l dihydrouridine synthase 4 like INVOLVED IN tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIi (ortholog) NW_004955410 11919710 11931593 + 102030159 AGCD01010837;GBDF01252851;XM_005377271;XM_005377272;XM_005377273;XM_005377274;XM_005377275;XM_005377276;XM_005377277;XM_005377278 XP_005377328;XP_005377329;XP_005377330;XP_005377331;XP_005377332;XP_005377333;XP_005377334;XP_005377335 MODEL 39131912 rrna 5S_rRNA 5S ribosomal RNA 8849903 protein-coding Cldn18 claudin 18 INVOLVED IN cellular response to estrogen stimulus (ortholog); digestive tract development (ortholog); epithelial cell proliferation (ortholog); ASSOCIATED WITH asthma (ortholog); megacolon (ortholog); FOUND IN cell-cell junction (ortholog); plasma membrane (ortholog); tight junction (ortholog) NW_004955501 962188 991922 - 102011135 AGCD01064043;GBDK01013094;XM_005406751;XM_005406752 XP_005406808;XP_005406809 MODEL 8974001 protein-coding LOC102012188 vomeronasal type-1 receptor 90-like NW_004955414 14997711 14998679 - 102012188 AGCD01015167;XM_005380441 XP_005380498 MODEL 8949334 ncrna LOC102009056 uncharacterized LOC102009056 NW_004955418 15612269 15614198 - 102009056 AGCD01019108;GBDF01097946;XR_260557 MODEL 39132519 rrna 5S_rRNA 5S ribosomal RNA 8726480 protein-coding Dck deoxycytidine kinase ENCODES a protein that exhibits ATP binding (ortholog); cytidine kinase activity (ortholog); deoxyadenosine kinase activity (ortholog); INVOLVED IN deoxycytidine metabolic process (ortholog); nucleoside phosphate biosynthetic process (ortholog); purine nucleotide salvage (ortholog); PARTICIPATES IN gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; lamivudine pharmacokinetics pathway; FOUND IN nucleoplasm (ortholog) NW_004955447 2031851 2067005 - 102026689 AGCD01040526;AGCD01040527;AGCD01040528;GBDJ01304367;GBDJ01336545;XM_005392943 XP_005393000 MODEL 9056887 protein-coding Hyi hydroxypyruvate isomerase (putative) NW_004955537 3017860 3020642 - 102027112 AGCD01070940;GBDK01140725;XM_005410655;XM_013507750 XP_005410712;XP_013363204 MODEL 8765517 protein-coding Etv5 ETS variant transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); locomotory behavior (ortholog); male germ-line stem cell asymmetric division (ortholog); ASSOCIATED WITH Neoplastic Processes (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955420 21503820 21576539 + 102008001 AGCD01021138;AGCD01021139;AGCD01021140;AGCD01021141;GBDF01249226;XM_013513339 XP_013368793 MODEL 8906722 ncrna LOC102024643 uncharacterized LOC102024643 NW_004955405 30035636 30036902 - 102024643 AGCD01005263;XR_259411 MODEL 8942159 protein-coding CUNH8orf34 chromosome unknown C8orf34 homolog NW_004955444 10700697 11071804 - 102006622 AGCD01039024;AGCD01039025;AGCD01039026;AGCD01039027;AGCD01039028;AGCD01039029;AGCD01039030;AGCD01039031;AGCD01039032;AGCD01039033;GBBH01229672;GBDI01263306;XM_013518171;XM_013518172;XM_013518173 XP_013373625;XP_013373626;XP_013373627 MODEL 8865727 pseudo LOC102013359 cryptochrome-1-like NW_004955402 23388755 23392703 + 102013359 AGCD01000622 MODEL 8952717 pseudo LOC102012956 septin-2 pseudogene NW_004955474 8331644 8332821 - 102012956 AGCD01054549 MODEL 8760780 protein-coding Dennd4b DENN domain containing 4B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of Rab protein signal transduction (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Dwarfism (ortholog); Familial Prostate Cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955545 526057 541118 - 102022964 AGCD01071799;GBDI01131695;GBDI01131819;XM_005411455;XM_013508225 XP_005411512;XP_013363679 MODEL 8972191 protein-coding Ino80c INO80 complex subunit C INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN fibrillar center (ortholog); Ino80 complex (ortholog); MLL1 complex (ortholog) NW_004955402 22189943 22210315 - 102007288 AGCD01000603;AGCD01000604;GBDI01168667;XM_005372802;XM_013509834;XM_013509865 XP_005372859;XP_013365288;XP_013365319 MODEL 9050479 ncrna LOC102011343 uncharacterized LOC102011343 NW_004955507 2011410 2055347 - 102011343 AGCD01065577;AGCD01065578;GBDK01390619;XR_001231618;XR_264370 MODEL 8849161 protein-coding Anxa6 annexin A6 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); cholesterol binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); calcium ion transport (ortholog); mitochondrial calcium ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); intercalated disc (ortholog); late endosome membrane (ortholog) NW_004955408 2522027 2565862 + 102017306 AGCD01008011;AGCD01008012;AGCD01008013;AGCD01008014;GBCB01006018;GBDI01016338;XM_013508182 XP_013363636 MODEL 9056595 protein-coding LOC102015573 transmembrane protease serine 9-like NW_004955559 316936 347247 + 102015573 AGCD01073574;AGCD01073575;AGCD01073576;AGCD01073577;AGCD01073578;XM_005412968 XP_005413025 MODEL 39133976 misc_rna 7SK 7SK RNA 8918593 ncrna LOC102021930 uncharacterized LOC102021930 NW_004955403 4854568 4862986 + 102021930 AGCD01001799;GBDF01251789;XR_259151 MODEL 8948933 protein-coding LOC102021231 NKG2-A/NKG2-B type II integral membrane protein-like NW_004955413 7459317 7466055 + 102021231 AGCD01013820;AGCD01013821;GBDK01207340;XM_013511292 XP_013366746 MODEL 8772776 protein-coding Acrv1 acrosomal vesicle protein 1 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955412 26654980 26664989 - 102023570 AGCD01013204;AGCD01013205;GBDF01010364;XM_013510946;XM_013510947;XM_013510948 XP_013366400;XP_013366401;XP_013366402 MODEL 8875947 protein-coding Elf3 E74 like ETS transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); blastocyst development (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH biliary tract benign neoplasm (ortholog); Lung Injury (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955406 38126633 38131292 + 102021843 AGCD01006594;GBCQ01003498;XM_005375202;XM_013522296 XP_005375259;XP_013377750 MODEL 8982581 ncrna LOC102020455 uncharacterized LOC102020455 NW_004955492 3830903 3845283 - 102020455 AGCD01060701;GBDF01127764;XR_001231248 MODEL 8895400 ncrna LOC102009847 uncharacterized LOC102009847 NW_004955487 8288681 8301499 - 102009847 AGCD01059432;AGCD01059433;GBDF01084799;XR_263988 MODEL 8749779 ncrna LOC102014835 uncharacterized LOC102014835 NW_004955550 411694 413213 + 102014835 AGCD01072500;GBDF01112427;XR_264915 MODEL 9026733 protein-coding Ik IK cytokine ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); mRNA splicing, via spliceosome (ortholog); FOUND IN mitotic spindle pole (ortholog); nuclear chromosome (ortholog); nuclear speck (ortholog) NW_004955418 39695 52862 - 102028750 AGCD01018664;AGCD01018665;GBBH01033048;XM_005382016 XP_005382073 MODEL 8790503 protein-coding LOC102008665 dnaJ homolog subfamily B member 6-like NW_004955438 5105330 5113520 - 102008665 AGCD01035057;GBDF01094584;GBDF01237045;XM_013517150 XP_013372604 MODEL 9046475 pseudo LOC102003959 ESF1 homolog pseudogene NW_004955413 20383463 20386134 - 102003959 AGCD01014215 MODEL 39134252 misc_rna 7SK 7SK RNA 8956708 pseudo LOC102016680 60S ribosomal protein L23-like NW_004955463 4515595 4516016 + 102016680 AGCD01049607 MODEL 8969459 pseudo LOC102016328 40S ribosomal protein S28 pseudogene NW_004955448 424686 428304 - 102016328 AGCD01041230;XM_005392984 MODEL 8780783 protein-coding C1s complement C1s ENCODES a protein that exhibits identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); glial cell differentiation (ortholog); protein maturation (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); autoimmune hepatitis (ortholog); Complement Component C1s Deficiency (ortholog); FOUND IN complement component C1 complex (ortholog); extracellular region (ortholog); symbiont cell surface (ortholog) NW_004955413 4620450 4630860 + 102011424 AGCD01013621;GBDF01017372;XM_005378855 XP_005378912 MODEL 8717310 pseudo LOC102014069 high mobility group protein B3 pseudogene NW_004955505 5110525 5111126 + 102014069 AGCD01065145 MODEL 8699801 protein-coding Dlx1 distal-less homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to BMP stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955449 2920705 2924667 - 102015676 AGCD01041839;GBCC01012740;XM_005393218 XP_005393275 MODEL 10063073 ncrna LOC106150016 uncharacterized LOC106150016 NW_004955460 6779113 6790061 - 106150016 AGCD01048477;GBDF01303447;XR_001236538 MODEL 8768844 protein-coding Kat5 lysine acetyltransferase 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); breast cancer (ortholog); iron deficiency anemia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); kinetochore (ortholog) NW_004955422 19557498 19565044 - 102029638 AGCD01023019;GBCE01096942;XM_005384464;XM_005384465;XM_005384466;XM_005384467;XM_013513854 XP_005384521;XP_005384522;XP_005384523;XP_005384524;XP_013369308 MODEL 8773776 protein-coding Ffar4 free fatty acid receptor 4 ENCODES a protein that exhibits arrestin family protein binding (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); fat cell differentiation (ortholog); FOUND IN cilium (ortholog); endocytic vesicle (ortholog); endosome membrane (ortholog) NW_004955507 81910 110047 + 102028663 AGCD01065461;AGCD01065462;GBDK01117139;XM_005407515 XP_005407572 MODEL 8733503 ncrna LOC102005792 uncharacterized LOC102005792 NW_004955414 5124870 5149552 - 102005792 AGCD01014888;XR_260153 MODEL 9049307 ncrna LOC102017844 uncharacterized LOC102017844 NW_004955407 37132665 37188696 - 102017844 AGCD01007778;AGCD01007779;GBDF01281780;XR_001231639;XR_001231640;XR_001231642;XR_259617 MODEL 8811292 protein-coding Grn granulin precursor ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN astrocyte activation involved in immune response (ortholog); blastocyst hatching (ortholog); chondrocyte proliferation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 10 (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) NW_004955451 17368600 17371981 + 102012599 AGCD01043745;GBDF01004036;XM_005394531;XM_005394532 XP_005394588;XP_005394589 MODEL 9027719 pseudo LOC102008295 prefoldin subunit 4 pseudogene NW_004955410 29037966 29038370 - 102008295 AGCD01011273 MODEL 8880653 protein-coding Cldn19 claudin 19 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); apical junction assembly (ortholog); cell junction assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); nephrocalcinosis (ortholog); renal hypomagnesemia 3 (ortholog); FOUND IN apical junction complex (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955537 2265711 2271096 - 102014606 AGCD01070921;GBCQ01010369;XM_005410615;XM_005410616 XP_005410672;XP_005410673 MODEL 8959345 protein-coding LOC102014471 olfactory receptor 5K1 NW_004955427 55618 56677 + 102014471 AGCD01026801;XM_005386270 XP_005386327 MODEL 8860695 pseudo LOC102007941 coiled-coil domain-containing protein 152-like NW_004955440 2711927 2712937 + 102007941 AGCD01036218 MODEL 8919697 pseudo LOC102011811 PCNA-associated factor pseudogene NW_004955440 19528120 19528458 - 102011811 AGCD01036637 MODEL 8944008 protein-coding Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 ENCODES a protein that exhibits KDEL sequence binding (ortholog); INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); T cell apoptotic process (ortholog); T cell differentiation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955559 2080085 2087579 + 102011057 AGCD01073691;GBDJ01021309;XM_005412955 XP_005413012 MODEL 8786749 protein-coding Ctsa cathepsin A ENCODES a protein that exhibits carboxypeptidase activity (ortholog); serine-type carboxypeptidase activity (ortholog); INVOLVED IN negative regulation of chaperone-mediated autophagy (ortholog); proteolysis (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH brain small vessel disease 6 with leukoencephalopathy (ortholog); galactosialidosis (ortholog); genetic disease (ortholog); FOUND IN lysosome (ortholog) NW_004955445 11399151 11405069 - 102025735 AGCD01039690;GBDF01087146;XM_005392401 XP_005392458 MODEL 39131632 rrna 5S_rRNA 5S ribosomal RNA 8998011 pseudo LOC102011352 transcriptional coactivator YAP1-like NW_004955431 1758354 1764850 + 102011352 AGCD01029917 MODEL 9055737 ncrna LOC102015949 uncharacterized LOC102015949 NW_004955475 8524246 8594126 + 102015949 AGCD01055042;AGCD01055043;AGCD01055044;AGCD01055045;GBDK01312973;XR_263613 MODEL 8756577 protein-coding Abcc4 ATP binding cassette subfamily C member 4 (PEL blood group) ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type glutathione S-conjugate transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); cAMP transport (ortholog); cilium assembly (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; lamivudine pharmacokinetics pathway; mercaptopurine pharmacodynamics pathway; ASSOCIATED WITH cholestasis (ortholog); cognitive disorder (ortholog); Colorectal Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); external side of apical plasma membrane (ortholog) NW_004955404 14700808 14927944 + 102025647 AGCD01003520;AGCD01003521;AGCD01003522;AGCD01003523;GBCB01100077;GBCQ01064634;XM_005374108;XM_005374109 XP_005374165;XP_005374166 MODEL 8920865 ncrna LOC102010579 uncharacterized LOC102010579 NW_004955416 6320380 6345046 + 102010579 AGCD01016940;AGCD01016941;XR_260358 MODEL 9001350 protein-coding C2 complement C2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, classical pathway (ortholog); ASSOCIATED WITH age related macular degeneration 14 (ortholog); Alzheimer's disease (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN classical-complement-pathway C3/C5 convertase complex (ortholog); symbiont cell surface (ortholog) NW_004955437 449171 460898 + 102004317 AGCD01034137;GBCE01029038;XM_005389395 XP_005389452 MODEL 39131768 rrna 5S_rRNA 5S ribosomal RNA 39133977 misc_rna 7SK 7SK RNA 8751893 protein-coding LOC102019440 olfactory receptor 4L1-like NW_004955550 183997 184935 + 102019440 AGCD01072485;XM_005412127 XP_005412184 MODEL 8752967 pseudo LOC102012190 heat shock factor-binding protein 1 pseudogene NW_004955415 16038711 16039206 + 102012190 AGCD01016366;XM_005380832 MODEL 8894159 protein-coding Dusp1 dual specificity phosphatase 1 ENCODES a protein that exhibits growth factor binding (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to chemokine (ortholog); cellular response to hormone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Amyloid Neuropathies (ortholog); anti-basement membrane glomerulonephritis (ortholog); arteriosclerosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955408 25481294 25484381 - 102026722 AGCD01008647;GBCE01000631;XM_005376341 XP_005376398 MODEL 8867928 protein-coding LOC102009058 L-amino-acid oxidase-like NW_004955418 29930239 29946380 - 102009058 AGCD01019491;AGCD01019492;XM_005382362 XP_005382419 MODEL 8953547 protein-coding Treml4 triggering receptor expressed on myeloid cells like 4 INVOLVED IN intracellular protein localization (ortholog); phagocytosis, engulfment (ortholog); positive regulation of defense response to virus by host (ortholog); FOUND IN endoplasmic reticulum (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955437 7827329 7846406 - 102010521 AGCD01034469;GBDK01021729;XM_005389682;XM_013517108;XM_013517109 XP_005389739;XP_013372562;XP_013372563 MODEL 8884763 protein-coding Etv6 ETS variant transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); hematopoietic stem cell proliferation (ortholog); mesenchymal cell apoptotic process (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog) NW_004955413 8698412 8912011 + 102012300 AGCD01013886;AGCD01013887;GBDI01290570;GBDJ01030940;XM_013511474 XP_013366928 MODEL 8900387 protein-coding LOC102020809 uncharacterized LOC102020809 NW_004955487 9120669 9125892 + 102020809 AGCD01059452;GBDF01190977;XM_013504349;XM_013504350;XM_013504351 XP_013359803;XP_013359804;XP_013359805 MODEL 8841785 pseudo LOC102024645 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955455 3212258 3213263 - 102024645 AGCD01045617 MODEL 8997258 pseudo LOC102008668 protein S100-A10 pseudogene NW_004955547 477402 477949 + 102008668 AGCD01072162;XM_005411852 MODEL 8867908 protein-coding Crip2 cysteine rich protein 2 INVOLVED IN hemopoiesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cell cortex (ortholog) NW_004955538 3673452 3683384 + 102008984 AGCD01071174;AGCD01071175;GBDK01220548;XM_005410875;XM_013507873 XP_005410932;XP_013363327 MODEL 8995004 pseudo LOC102012958 retinol dehydrogenase 14 pseudogene NW_004955476 11736864 11740171 - 102012958 AGCD01055474 MODEL 9057896 protein-coding LOC102009418 uncharacterized LOC102009418 NW_004955528 214625 215535 - 102009418 AGCD01069515;XM_005410049 XP_005410106 MODEL 8947146 ncrna LOC102016329 uncharacterized LOC102016329 NW_004955448 6905673 6906316 + 102016329 AGCD01041396;GBDJ01045474;XR_262461 MODEL 9039010 protein-coding LOC102011813 keratin, type II cytoskeletal 74 NW_004955547 2973452 2981010 - 102011813 AGCD01072302;GBDF01116746;XM_005411949 XP_005412006 MODEL 8798604 pseudo LOC102013698 V-type proton ATPase subunit G 1 pseudogene NW_004955409 26746607 26747019 + 102013698 AGCD01010201 MODEL 8724047 protein-coding Ino80d INO80 complex subunit D INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway NW_004955457 8913625 8983859 + 102017955 AGCD01046922;AGCD01046923;AGCD01046924;GBDK01343093;XM_005397001;XM_005397003 XP_005397058;XP_005397060 MODEL 10361026 protein-coding LOC106150017 translation initiation factor IF-2-like NW_004955460 315054 315615 + 106150017 AGCD01048340;GBDF01113276;XM_013521284 XP_013376738 MODEL 39131913 rrna 5S_rRNA 5S ribosomal RNA 9053022 protein-coding Anxa7 annexin A7 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN autophagy (ortholog); cell population proliferation (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH breast cancer (ortholog); colon adenocarcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN alveolar lamellar body (ortholog); chromaffin granule membrane (ortholog); cytosol (ortholog) NW_004955437 18394371 18421779 + 102018767 AGCD01034790;AGCD01034791;GBDI01027399;XM_005389980;XM_013516762;XM_013516763 XP_005390037;XP_013372216;XP_013372217 MODEL 8955793 protein-coding Dlx2 distal-less homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN branching morphogenesis of a nerve (ortholog); cartilage development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleus (ortholog) NW_004955449 2907502 2909893 + 102015361 AGCD01041838;GBCE01092339;XM_005393217 XP_005393274 MODEL 8855293 protein-coding Fga fibrinogen alpha chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); structural molecule activity (ortholog); INVOLVED IN acute-phase response (ortholog); blood coagulation (ortholog); blood coagulation, common pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8806964 8814671 + 102008617 AGCD01053195;GBDF01130962;XM_005400932 XP_005400989 MODEL 8926699 protein-coding Elf4 E74 like ETS transcription factor 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN natural killer cell proliferation (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of interleukin-1 beta production (ortholog); ASSOCIATED WITH autistic disorder (ortholog); AUTOINFLAMMATORY SYNDROME, FAMILIAL, X-LINKED, BEHCET-LIKE 2 (ortholog); FOUND IN nuclear body (ortholog); PML body (ortholog) NW_004955473 4934770 4986283 + 102010053 AGCD01053962;AGCD01053963;GBCQ01031364;XM_005401248;XM_005401249;XM_013523065;XM_013523066;XM_013523067 XP_005401305;XP_005401306;XP_013378519;XP_013378520;XP_013378521 MODEL 8785691 protein-coding Hykk hydroxylysine kinase ENCODES a protein that exhibits hydroxylysine kinase activity (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955450 900783 918873 + 102010433 AGCD01042345;GBDI01280889;XM_005393449;XM_005393450;XM_013518985 XP_005393506;XP_005393507;XP_013374439 MODEL 9001312 protein-coding Dclk1 doublecortin like kinase 1 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN axon extension (ortholog); axonogenesis (ortholog); brain development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) NW_004955431 9975629 10302605 + 102003267 AGCD01030200;AGCD01030201;AGCD01030202;GBBH01017176;XM_005387689;XM_005387690;XM_005387693 XP_005387746;XP_005387747;XP_005387750 MODEL 8884616 protein-coding Acsbg1 acyl-CoA synthetase bubblegum family member 1 ENCODES a protein that exhibits long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN long-chain fatty acid biosynthetic process (ortholog); long-chain fatty acid metabolic process (ortholog); ovarian follicle atresia (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); demyelinating disease (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955450 703874 744782 - 102008164 AGCD01042343;GBDF01052909;XM_005393441;XM_013518893;XM_013518894 XP_005393498;XP_013374347;XP_013374348 MODEL 8843135 pseudo LOC102013361 ras-related protein Rab-33B pseudogene NW_004955402 34608545 34611065 - 102013361 AGCD01000866 MODEL 8939439 protein-coding LOC102008301 zinc finger protein 527 NW_004955468 1868700 1887881 + 102008301 AGCD01051785;GBDF01117493;XM_005399918;XM_013522318 XP_005399975;XP_013377772 MODEL 9038028 protein-coding LOC102003961 olfactory receptor 51I1-like NW_004955414 20943623 20944567 + 102003961 AGCD01015396;XM_005380488 XP_005380545 MODEL 9030550 protein-coding CUNH8orf48 chromosome unknown C8orf48 homolog NW_004955463 3553732 3557304 - 102013913 AGCD01049590;GBDF01125165;XM_005415371 XP_005415428 MODEL 39133978 misc_rna 7SK 7SK RNA 8821392 pseudo LOC102016681 cytosolic carboxypeptidase-like protein 5 NW_004955411 11679314 11682887 + 102016681 AGCD01011830 MODEL 9039760 ncrna LOC102014472 uncharacterized LOC102014472 NW_004955507 2354626 2365718 - 102014472 AGCD01065586;GBDF01221738;XR_264371 MODEL 9024969 ncrna LOC102014071 uncharacterized LOC102014071 NW_004955506 4721256 4728012 - 102014071 AGCD01065342;GBDF01221712;XR_001231588;XR_264354 MODEL 8975820 protein-coding Dennd4c DENN domain containing 4C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); protein localization to plasma membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); insulin-responsive compartment (ortholog) NW_004955434 21640068 21740842 + 102026145 AGCD01032647;AGCD01032648;AGCD01032649;AGCD01032650;AGCD01032651;AGCD01032652;GBBH01141559;XM_005388729;XM_013516304;XM_013516305 XP_005388786;XP_013371758;XP_013371759 MODEL 8935333 pseudo LOC102015575 ubiquitin-conjugating enzyme E2 N-like NW_004955444 18531130 18531656 - 102015575 AGCD01039242 MODEL 8748846 protein-coding Kat6a lysine acetyltransferase 6A ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); cellular senescence (ortholog); embryonic hemopoiesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Arboleda-Tham syndrome (ortholog); FOUND IN MOZ/MORF histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955536 900198 1015520 + 102010091 AGCD01070744;AGCD01070745;AGCD01070746;AGCD01070747;GBBH01177589;XM_005410512;XM_005410513 XP_005410569;XP_005410570 MODEL 8984887 ncrna LOC102021233 uncharacterized LOC102021233 NW_004955471 12839000 12842044 - 102021233 AGCD01053308;GBDF01096973;XR_001237056 MODEL 8750727 protein-coding LOC102021933 protein asunder homolog NW_004956483 1036 3435 + 102021933 AGCD01079671;GBCC01016012;XM_013510229 XP_013365683 MODEL 39132525 rrna 5S_rRNA 5S ribosomal RNA 39131633 rrna 5S_rRNA 5S ribosomal RNA 8785774 protein-coding LOC102014836 cytochrome P450 2B4-like NW_004955555 16838 26786 + 102014836 AGCD01073017;AGCD01073018;AGCD01073019;AGCD01073020;GBDK01013626;XM_013508783 XP_013364237 MODEL 8804392 pseudo LOC102017846 heat shock cognate 71 kDa protein-like NW_004955407 35524223 35534029 - 102017846 AGCD01007744;AGCD01007745 MODEL 8758482 protein-coding LOC102020457 aldose reductase-related protein 2-like NW_004955494 7937031 8115110 + 102020457 AGCD01061559;AGCD01061560;AGCD01061561;AGCD01061562;AGCD01061563;AGCD01061564;AGCD01061565;AGCD01061566;AGCD01061567;AGCD01061568;AGCD01061569;AGCD01061570;AGCD01061571;AGCD01061572;AGCD01061573;AGCD01061574;AGCD01061575;AGCD01061576;AGCD01061577;AGCD01061578;GBDF01076191;GBDK01322138;XM_013505015 XP_013360469 MODEL 8806570 ncrna LOC102011354 uncharacterized LOC102011354 NW_004955432 10743652 10745702 - 102011354 AGCD01030936;GBDF01250417;XR_261523 MODEL 39131363 protein-coding C20orf204 chromosome 20 open reading frame 204 8948794 protein-coding Ikbip IKBKB interacting protein INVOLVED IN obsolete negative regulation of NF-kappaB transcription factor activity (ortholog); protein phosphorylation (ortholog); response to interleukin-1 (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955405 34600211 34619614 - 102015476 AGCD01005380;GBDK01395326;XM_005374509;XM_005374510 XP_005374566;XP_005374567 MODEL 8928808 protein-coding Cldn2 claudin 2 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN calcium-independent cell-cell adhesion (ortholog); cell-cell adhesion (ortholog); innate immune response in mucosa (ortholog); ASSOCIATED WITH AZOOSPERMIA, OBSTRUCTIVE, WITH NEPHROLITHIASIS (ortholog); male infertility (ortholog); pancreatitis (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955490 9137157 9180945 - 102021983 AGCD01060306;GBCQ01011511;XM_005404708;XM_005404709;XM_005404710 XP_005404765;XP_005404766;XP_005404767 MODEL 8934243 protein-coding LOC102019442 zinc transporter 1-like NW_004955442 19617356 19619919 - 102019442 AGCD01038070;AGCD01038071;GBDF01252767;XM_013518023 XP_013373477 MODEL 8858681 pseudo LOC102012193 proteasome subunit alpha type-6 pseudogene NW_004955416 8425977 8426698 - 102012193 AGCD01017052 MODEL 8940065 ncrna LOC102005793 uncharacterized LOC102005793 NW_004955470 11386077 11391036 - 102005793 AGCD01052887;GBDF01224584;XR_001237001;XR_263503 MODEL 39133979 misc_rna 7SK 7SK RNA 8717760 protein-coding LOC102008303 zinc finger protein 419-like NW_004955468 4251476 4270784 + 102008303 AGCD01051903;AGCD01051904;GBCE01148167;XM_005400012;XM_013522366 XP_005400069;XP_013377820 MODEL 8915499 pseudo LOC102012960 E3 ubiquitin-protein ligase Mdm2 pseudogene NW_004955416 14407621 14422095 - 102012960 AGCD01017262;AGCD01017263;AGCD01017264 MODEL 8905022 pseudo LOC102009420 proteasome assembly chaperone 2 pseudogene NW_004955536 716838 717352 + 102009420 AGCD01070737 MODEL 39131769 rrna 5S_rRNA 5S ribosomal RNA 8951482 protein-coding Grp gastrin releasing peptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN cellular response to sodium phosphate (ortholog); mast cell degranulation (ortholog); negative regulation of transmission of nerve impulse (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); Aortic Calcification (ortholog); cerebrovascular disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); neuron projection (ortholog) NW_004955402 43382608 43393452 + 102013890 AGCD01001072;GBDJ01214066;XM_005373000 XP_005373057 MODEL 8845043 protein-coding Dlx3 distal-less homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN blood vessel development (ortholog); BMP signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1B (ortholog); amelogenesis imperfecta type 4 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 11635027 11640091 + 102017293 AGCD01043360;AGCD01043361;GBCE01085065;XM_005394184 XP_005394241 MODEL 8802173 protein-coding Anxa9 annexin A9 ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); phosphatidylserine binding (ortholog); phospholipid binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); lateral plasma membrane (ortholog) NW_004955588 352175 374723 + 102016003 AGCD01076106;AGCD01076107;AGCD01076108;GBCQ01039606;XM_005414458;XM_013509917;XM_013509918;XM_013509919;XM_013509920 XP_005414515;XP_013365371;XP_013365372;XP_013365373;XP_013365374 MODEL 8855280 protein-coding LOC102007943 keratin, type II cuticular Hb3 NW_004955547 2671303 2677998 - 102007943 AGCD01072294;GBDK01416954;XM_005411938 XP_005411995 MODEL 8836832 protein-coding Fgb fibrinogen beta chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein-folding chaperone binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH cardiovascular system disease (ortholog); carotid artery disease (ortholog); congenital afibrinogenemia (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8824901 8832836 - 102009374 AGCD01053196;GBCB01021502;XM_005400935 XP_005400992 MODEL 8995786 ncrna LOC102013362 uncharacterized LOC102013362 NW_004955402 58255556 58259494 - 102013362 AGCD01001528;AGCD01001529;GBDF01117366;XR_259109 MODEL 8970638 protein-coding LOC102003963 platelet basic protein-like NW_004955474 308503 310298 + 102003963 AGCD01054213;GBCQ01144875;XM_005401302 XP_005401359 MODEL 8777792 protein-coding Trerf1 transcriptional regulating factor 1 ENCODES a protein that exhibits nuclear progesterone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coactivator binding (ortholog); INVOLVED IN cellular response to progesterone stimulus (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 8411951 8600283 - 102018648 AGCD01034489;AGCD01034490;AGCD01034491;AGCD01034492;GBDF01084113;GBDK01059855;XM_013516789 XP_013372243 MODEL 8833237 ncrna LOC102020810 uncharacterized LOC102020810 NW_004955422 2499651 2506235 - 102020810 AGCD01022485;GBDF01145109;XR_260848 MODEL 9043935 protein-coding Eva1a eva-1 homolog A, regulator of programmed cell death INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); cardiac left ventricle morphogenesis (ortholog) NW_004955424 10308586 10358477 + 102016071 AGCD01024511;AGCD01024512;GBCE01133628;XM_005385464;XM_005385465;XM_005385466;XM_005385467;XM_005385470;XM_005385471;XM_013514721;XM_013514722 XP_005385521;XP_005385522;XP_005385523;XP_005385524;XP_005385527;XP_005385528;XP_013370175;XP_013370176 MODEL 8810989 protein-coding Ctsb cathepsin B ENCODES a protein that exhibits collagen binding (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagy (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to thyroid hormone stimulus (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); Albuminuria (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); cell surface (ortholog) NW_004955403 53086236 53100217 - 102003509 AGCD01003032;AGCD01003033;AGCD01003034;GBBH01000375;XM_005373830 XP_005373887 MODEL 8715568 protein-coding LOC102014473 olfactory receptor 8H1-like NW_004955511 1088261 1089199 + 102014473 AGCD01066356;XM_013506423 XP_013361877 MODEL 8844853 ncrna LOC102011816 uncharacterized LOC102011816 NW_004955443 10236461 10240981 - 102011816 AGCD01038372;GBDF01078584;XR_262203 MODEL 8719744 protein-coding Crip3 cysteine rich protein 3 INVOLVED IN T cell proliferation (ortholog); FOUND IN cytoplasm (ortholog) NW_004955437 9210901 9215471 - 102006163 AGCD01034522;GBDJ01337171;XM_005389761;XM_013516979;XM_013516980 XP_005389818;XP_013372433;XP_013372434 MODEL 8770409 ncrna LOC102013702 uncharacterized LOC102013702 NW_004955463 3486518 3488336 - 102013702 AGCD01049587;GBDF01214538;XR_263142 MODEL 10356262 protein-coding LOC106150018 uncharacterized LOC106150018 NW_004955460 11102710 11108274 + 106150018 AGCD01048629;GBDI01167897;XM_013521289 XP_013376743 MODEL 8951388 ncrna LOC102010581 uncharacterized LOC102010581 NW_004955478 6558216 6561171 + 102010581 AGCD01055900;GBDF01140094;XR_001230864;XR_263703 MODEL 8926503 protein-coding Dennd5a DENN domain containing 5A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 49 (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); retromer complex (ortholog); trans-Golgi network (ortholog) NW_004955414 24861950 24955031 - 102027063 AGCD01015559;AGCD01015560;AGCD01015561;AGCD01015562;AGCD01015563;GBDF01050600;XM_005380255 XP_005380312 MODEL 9057425 pseudo LOC102021234 olfactory receptor 52B4-like NW_004955414 20036051 20036980 - 102021234 AGCD01015352 MODEL 9004565 pseudo LOC102009061 liver carboxylesterase 2-like NW_004955484 9676099 9679287 - 102009061 AGCD01058425 MODEL 8756448 protein-coding Kat7 lysine acetyltransferase 7 ENCODES a protein that exhibits DNA replication origin binding (ortholog); histone acetyltransferase activity (ortholog); histone H3K14 acetyltransferase activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); internal peptidyl-lysine acetylation (ortholog); natural killer cell differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH androgen insensitivity syndrome (ortholog); breast cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN chromosome (ortholog); histone acetyltransferase complex (ortholog); histone H3-K14 acetyltransferase complex (ortholog) NW_004955451 11770201 11802992 - 102021072 AGCD01043364;AGCD01043365;AGCD01043366;GBDK01143318;XM_005394197;XM_005394198 XP_005394254;XP_005394255 MODEL 8883242 pseudo LOC102020461 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like NW_004955424 22114938 22116340 + 102020461 AGCD01024933 MODEL 9013531 protein-coding Dusp10 dual specificity phosphatase 10 ENCODES a protein that exhibits JUN kinase binding (ortholog); MAP kinase phosphatase activity (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of epithelial cell migration (ortholog); negative regulation of epithelial cell proliferation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); Inflammation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955520 2338548 2371591 + 102020480 AGCD01068078;AGCD01068079;GBDK01116090;XM_005409261;XM_013507067 XP_005409318;XP_013362521 MODEL 8952517 protein-coding Hyls1 HYLS1 centriolar and ciliogenesis associated ASSOCIATED WITH hydrolethalus syndrome (ortholog); hydrolethalus syndrome 1 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 26937460 26949571 + 102025103 AGCD01013224;GBDF01043493;XM_005378474;XM_005378475;XM_005378476;XM_005378477;XM_005378478;XM_005378479;XM_013511232 XP_005378531;XP_005378532;XP_005378533;XP_005378534;XP_005378535;XP_005378536;XP_013366686 MODEL 8722126 pseudo LOC102024652 putative hydrolase RBBP9 pseudogene NW_004955408 24651679 24656006 + 102024652 AGCD01008621 MODEL 8925057 protein-coding Dclk2 doublecortin like kinase 2 ENCODES a protein that exhibits microtubule binding (ortholog); protein kinase activity (ortholog); INVOLVED IN hippocampus development (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of protein localization to nucleus (ortholog) NW_004955471 4903077 5044426 + 102019689 AGCD01053093;AGCD01053094;GBBH01132153;GBCE01135589;XM_005400882;XM_005400883;XM_005400884;XM_005400885 XP_005400939;XP_005400940;XP_005400941;XP_005400942 MODEL 8739138 protein-coding Kdelr2 KDEL endoplasmic reticulum protein retention receptor 2 ENCODES a protein that exhibits KDEL sequence binding (ortholog); INVOLVED IN maintenance of protein localization in endoplasmic reticulum (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH osteogenesis imperfecta type 21 (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955460 13202400 13221319 + 102020774 AGCD01048674;GBCQ01041850;XM_005397890;XM_013521168 XP_005397947;XP_013376622 MODEL 8735883 protein-coding Cldn20 claudin 20 FOUND IN plasma membrane (ortholog); tight junction (ortholog) NW_004955439 6923157 6924098 - 102020717 AGCD01035762;XM_005390548 XP_005390605 MODEL 8946919 protein-coding LOC102007945 kallikrein-4-like NW_004955558 1622962 1627760 + 102007945 AGCD01073453;GBDF01079521;XM_013508853 XP_013364307 MODEL 8844120 pseudo LOC102016340 60S ribosomal protein L17 pseudogene NW_004955405 7570200 7570661 + 102016340 AGCD01004720 MODEL 8962710 pseudo LOC102012194 single-stranded DNA-binding protein 2 pseudogene NW_004955477 6506741 6507624 - 102012194 AGCD01055610 MODEL 39131914 rrna 5S_rRNA 5S ribosomal RNA 8743001 ncrna LOC102015952 uncharacterized LOC102015952 NW_004955478 10401955 10406758 + 102015952 AGCD01056132;AGCD01056133;GBDF01234513;XR_263714 MODEL 8756329 protein-coding LOC102015577 vomeronasal type-1 receptor 2-like NW_004955569 946463 947353 - 102015577 AGCD01074628;XM_013509363 XP_013364817 MODEL 9040166 pseudo LOC102003968 striatin-3-like NW_004955483 708746 721428 - 102003968 AGCD01057628 MODEL 8903208 protein-coding Abcc5 ATP binding cassette subfamily C member 5 ENCODES a protein that exhibits ABC-type transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); efflux transmembrane transporter activity (ortholog); INVOLVED IN cAMP transport (ortholog); cGMP transport (ortholog); export across plasma membrane (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); pancreatic cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) NW_004955420 23447920 23522732 + 102027859 AGCD01021248;GBDI01227093;XM_005383351;XM_005383352;XM_005383353;XM_005383354;XM_013513528 XP_005383408;XP_005383409;XP_005383410;XP_005383411;XP_013368982 MODEL 39132527 rrna 5S_rRNA 5S ribosomal RNA 8736725 pseudo LOC102008308 40S ribosomal protein SA pseudogene NW_004955414 6235311 6236262 - 102008308 AGCD01014914;XR_260239 MODEL 9031868 pseudo LOC102017847 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955458 3142433 3143246 + 102017847 AGCD01047274 MODEL 8923639 protein-coding LOC102021936 Ig-like V-type domain-containing protein FAM187A NW_004955451 17693409 17695551 + 102021936 AGCD01043767;GBCE01037287;XM_005394557 XP_005394614 MODEL 8866473 protein-coding LOC102014837 proline-rich receptor-like protein kinase PERK2 NW_004955442 17452487 17461619 - 102014837 AGCD01037955;GBDK01265267;XM_005391700;XM_005391701 XP_005391757;XP_005391758 MODEL 9037605 protein-coding LOC102011357 death-inducer obliterator 1-like NW_004955528 1209085 1240649 + 102011357 AGCD01069553;AGCD01069554;AGCD01069555;AGCD01069556;GBDF01089866;XM_013507433 XP_013362887 MODEL 39131435 protein-coding C21orf62 chromosome 21 open reading frame 62 8893898 protein-coding Elf5 E74 like ETS transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN ectoderm development (ortholog); ectodermal cell fate commitment (ortholog); mammary gland epithelial cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 11751073 11779313 + 102016484 AGCD01022765;GBBH01077250;XM_005384141;XM_005384142;XM_005384143 XP_005384198;XP_005384199;XP_005384200 MODEL 9040249 pseudo LOC102008670 40S ribosomal protein S13 pseudogene NW_004955441 317788 319866 + 102008670 AGCD01036700 MODEL 8955948 protein-coding LOC102019444 splicing factor, arginine/serine-rich 19 NW_004955559 1235878 1243218 - 102019444 AGCD01073638;GBBH01142756;GBDF01090351;XM_013508983 XP_013364437 MODEL 8751807 protein-coding Grpel1 GrpE like 1, mitochondrial ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); identical protein binding (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); middle cerebral artery infarction (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955514 3459774 3467279 + 102015229 AGCD01067096;GBBH01061487;XM_005408795 XP_005408852 MODEL 8780048 protein-coding Acsf2 acyl-CoA synthetase family member 2 ENCODES a protein that exhibits medium-chain fatty acid-CoA ligase activity (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 11276385 11306873 - 102013369 AGCD01043345;AGCD01043346;AGCD01043347;AGCD01043348;GBBH01126803;XM_005394171;XM_013519093;XM_013519094 XP_005394228;XP_013374547;XP_013374548 MODEL 8864939 protein-coding CUNH8orf58 chromosome unknown C8orf58 homolog NW_004955403 46024484 46027834 + 102012917 AGCD01002849;GBCB01089866;GBCQ01177202;XM_005373682 XP_005373739 MODEL 8947626 ncrna LOC102016682 uncharacterized LOC102016682 NW_004955465 2305614 2307175 + 102016682 AGCD01050350;GBCQ01178579;XR_263232 MODEL 8939253 protein-coding Aoah acyloxyacyl hydrolase ENCODES a protein that exhibits acyloxyacyl hydrolase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); lipopolysaccharide catabolic process (ortholog); lipopolysaccharide metabolic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) NW_004955460 6750851 6954185 + 102029597 AGCD01048477;GBBH01082803;XM_013521273;XM_013521274;XM_013521275;XM_013521276 XP_013376727;XP_013376728;XP_013376729;XP_013376730 MODEL 8811337 protein-coding LOC102014076 olfactory receptor 5D18-like NW_004955511 4975490 4976440 + 102014076 AGCD01066541;XM_005408280 XP_005408337 MODEL 8943754 pseudo LOC102020814 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta pseudogene NW_004955494 2731664 2733244 - 102020814 AGCD01061448 MODEL 39133980 misc_rna 7SK 7SK RNA 9018582 protein-coding Ctsc cathepsin C ENCODES a protein that exhibits chloride ion binding (ortholog); cysteine-type peptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of myelination (ortholog); obsolete positive regulation of proteolysis involved in protein catabolic process (ortholog); positive regulation of apoptotic signaling pathway (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); Aggressive Periodontitis, 1 (ortholog); allergic contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog) NW_004955414 5062355 5092631 + 102007990 AGCD01014888;GBDI01169299;GBDI01169301;XM_013511971 XP_013367425 MODEL 39131770 rrna 5S_rRNA 5S ribosomal RNA 8836844 protein-coding LOC102009424 keratin, type II cytoskeletal 5-like NW_004955547 2759440 2771836 - 102009424 AGCD01072294;XM_005411942 XP_005411999 MODEL 9002298 protein-coding Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); IkappaB kinase activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); breast cancer (ortholog); Choroidal Neovascularization (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955536 611965 658647 - 102009105 AGCD01070732;GBDI01225670;XM_005410510 XP_005410567 MODEL 8736631 protein-coding Ino80e INO80 complex subunit E INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH spondylocostal dysostosis 5 (ortholog); FOUND IN Ino80 complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955493 6953945 6963910 - 102026988 AGCD01061152;GBDF01002093;XM_005405204;XM_013504785;XM_013504786;XM_013504787;XM_013504788 XP_005405261;XP_013360239;XP_013360240;XP_013360241;XP_013360242 MODEL 9029045 protein-coding Hyou1 hypoxia up-regulated 1 ENCODES a protein that exhibits ATP binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH immunodeficiency 59 (ortholog); spinocerebellar ataxia 17 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); mitochondrion (ortholog) NW_004955412 20149104 20161378 - 102023677 AGCD01012996;GBDF01002863;XM_005378294;XM_005378295;XM_005378296;XM_005378297 XP_005378351;XP_005378352;XP_005378353;XP_005378354 MODEL 9021863 protein-coding LOC102005795 fibrous sheath-interacting protein 2-like NW_004955473 4588318 4648716 + 102005795 AGCD01053953;AGCD01053954;GBDF01110725;XM_005401232;XM_013523062;XM_013523063 XP_005401289;XP_013378516;XP_013378517 MODEL 39131634 rrna 5S_rRNA 5S ribosomal RNA 8909017 pseudo LOC102012961 reactive oxygen species modulator 1 pseudogene NW_004955479 10848845 10849614 + 102012961 AGCD01056562 MODEL 8819643 protein-coding LOC102013703 glutathione S-transferase A4-like NW_004955411 3077380 3086049 + 102013703 AGCD01011534;AGCD01011535;GBCB01100401;XM_013510713 XP_013366167 MODEL 8977089 protein-coding Kdelr3 KDEL endoplasmic reticulum protein retention receptor 3 ENCODES a protein that exhibits KDEL sequence binding (ortholog); INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); FOUND IN COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 24638551 24648723 + 102020321 AGCD01014373;GBDF01290082;XM_005379260 XP_005379317 MODEL 8714138 pseudo LOC102016684 tyrosine-protein kinase Fyn pseudogene NW_004955465 730076 731579 + 102016684 AGCD01050314 MODEL 9039588 ncrna LOC102010585 uncharacterized LOC102010585 NW_004955418 15889079 15907996 + 102010585 AGCD01019113;GBDF01085813;XR_001233526;XR_001233527;XR_260559 MODEL 9029880 protein-coding Cript CXXC repeat containing interactor of PDZ3 domain ENCODES a protein that exhibits microtubule binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); protein localization to microtubule (ortholog); regulation of postsynaptic density assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); isolated growth hormone deficiency type IA (ortholog); SHORT STATURE WITH MICROCEPHALY AND DISTINCTIVE FACIES (ortholog); FOUND IN dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) NW_004955441 13525686 13533458 + 102011812 AGCD01037151;GBDF01119106;XM_013517589 XP_013373043 MODEL 8971129 ncrna LOC102021236 uncharacterized LOC102021236 NW_004955474 3181086 3181714 + 102021236 AGCD01054325;GBDF01160031;XR_263593 MODEL 8810340 pseudo LOC102003975 tubulin alpha-1 chain-like NW_004955420 23684889 23685741 + 102003975 AGCD01021253 MODEL 10345203 ncrna LOC106150019 uncharacterized LOC106150019 NW_004955460 11115100 11119671 + 106150019 AGCD01048629;XR_001236541 MODEL 10297441 protein-coding Dennd5b DENN domain containing 5B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of triglyceride transport (ortholog) NW_004955505 4134686 4295112 + 106146927 AGCD01065092;AGCD01065093;AGCD01065094;AGCD01065095;AGCD01065096;GBDF01118818;XM_013505934 XP_013361388 MODEL 8852590 pseudo LOC102009062 kinesin-associated protein 3-like NW_004955420 7992286 7995293 - 102009062 AGCD01020709 MODEL 8813080 protein-coding Fgd1 FYVE, RhoGEF and PH domain containing 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); filopodium assembly (ortholog); ASSOCIATED WITH Aarskog syndrome (ortholog); attention deficit hyperactivity disorder (ortholog); Congenital Foot Deformities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955475 1703374 1752710 - 102022074 AGCD01054758;GBDI01024804;XM_013502823 XP_013358277 MODEL 8727016 pseudo LOC102024656 uracil-DNA glycosylase pseudogene NW_004955462 1209532 1210412 - 102024656 AGCD01049103 MODEL 8833961 protein-coding Dlx4 distal-less homeobox 4 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); Neoplasm Invasiveness (ortholog); orofacial cleft 15 (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 11652249 11660083 - 102017833 AGCD01043362;GBCE01057103;XM_005394185;XM_005394186;XM_005394187;XM_013519108;XM_013519109 XP_005394242;XP_005394243;XP_005394244;XP_013374562;XP_013374563 MODEL 8969387 ncrna LOC102009425 uncharacterized LOC102009425 NW_004955549 824578 919142 - 102009425 AGCD01072431;GBCE01065742;XR_001232253;XR_001232254;XR_001232255;XR_001232256;XR_001232257;XR_264914 MODEL 8948405 protein-coding LOC102021937 alcohol dehydrogenase 4 NW_004955405 9357258 9377324 - 102021937 AGCD01004771;GBDI01329017;XM_005374294 XP_005374351 MODEL 8888168 protein-coding LOC102013363 ubiquinol-cytochrome-c reductase complex assembly factor 3 ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cristae formation (ortholog); mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 9 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955599 540598 541643 - 102013363 AGCD01076657;GBCE01052198;XM_005414784 XP_005414841 MODEL 8742925 protein-coding Katna1 katanin catalytic subunit A1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); dynein complex binding (ortholog); microtubule binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); intracellular protein localization (ortholog); microtubule bundle formation (ortholog); FOUND IN axon (ortholog); centriolar satellite (ortholog); centrosome (ortholog) NW_004955439 11620285 11658797 + 102010734 AGCD01035916;AGCD01035917;GBDF01155506;XM_005390601;XM_005390602;XM_005390603;XM_005390604;XM_005390605;XM_005390607 XP_005390658;XP_005390659;XP_005390660;XP_005390661;XP_005390662;XP_005390664 MODEL 8936517 protein-coding C2cd2 C2 calcium dependent domain containing 2 NW_004955407 39627435 39665156 + 102021097 AGCD01007832;GBBH01214687;GBDJ01064517;XM_013505230 XP_013360684 MODEL 9036048 ncrna LOC102007947 uncharacterized LOC102007947 NW_004955443 8832249 8845558 - 102007947 AGCD01038338;GBDJ01378112;XR_001235447;XR_001235448;XR_262198;XR_262199 MODEL 9009279 protein-coding Dclk3 doublecortin like kinase 3 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN negative regulation of protein localization to nucleus (ortholog); peptidyl-serine phosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955421 3593328 3618427 - 102029186 AGCD01021661;AGCD01021662;GBDK01281819;XM_013513810 XP_013369264 MODEL 8826539 protein-coding Acsf3 acyl-CoA synthetase family member 3 ENCODES a protein that exhibits malonyl-CoA synthetase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); malonate catabolic process (ortholog); ASSOCIATED WITH combined malonic and methylmalonic acidemia (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955541 2837487 2876220 + 102008259 AGCD01071426;AGCD01071427;AGCD01071428;GBBH01117625;XM_005411031;XM_013507984;XM_013507986 XP_005411088;XP_013363438;XP_013363440 MODEL 8721167 pseudo LOC102014474 RNA polymerase II subunit A C-terminal domain phosphatase pseudogene NW_004955431 1777431 1784253 - 102014474 AGCD01029918;XM_005387553 MODEL 8988706 protein-coding Trex1 three prime repair exonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); adenyl deoxyribonucleotide binding (ortholog); INVOLVED IN activation of immune response (ortholog); adaptive immune response (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN DNA replication pathway; G2/M DNA damage checkpoint pathway; ASSOCIATED WITH Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 1 (ortholog); brain disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955532 533877 535767 + 102025941 AGCD01070130;GBBH01050782;XM_005410151 XP_005410208 MODEL 8968855 ncrna LOC102012196 uncharacterized LOC102012196 NW_004955417 7422583 7435827 - 102012196 AGCD01018004;GBDF01079001;XR_260462 MODEL 39131915 rrna 5S_rRNA 5S ribosomal RNA 8857889 protein-coding Grpel2 GrpE like 2, mitochondrial ENCODES a protein that exhibits unfolded protein binding (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog) NW_004955853 1443 9278 + 102019557 AGCD01078493;GBBH01131678;GBCE01113023;XM_005415136 XP_005415193 MODEL 9051278 protein-coding LOC102011817 40S ribosomal protein S27-like NW_004955444 12300883 12301137 - 102011817 AGCD01039067;XM_005392136 XP_005392193 MODEL 8738159 ncrna LOC102015956 uncharacterized LOC102015956 NW_004955481 10026699 10028031 + 102015956 AGCD01057133;GBDK01357814;XR_001230929 MODEL 8876614 protein-coding LOC102015579 chromosome unknown open reading frame, human C1orf35 NW_004955581 316424 319109 + 102015579 AGCD01075667;GBDK01091133;XM_005414241 XP_005414298 MODEL 39132529 rrna 5S_rRNA 5S ribosomal RNA 9043072 pseudo LOC102008312 60S ribosomal protein L7 pseudogene NW_004955479 9952660 9953327 - 102008312 AGCD01056510 MODEL 8981947 protein-coding LOC102020816 protein FAM161A NW_004955424 22125868 22142713 + 102020816 AGCD01024933;GBDF01050425;XM_005385735;XM_005385737 XP_005385792;XP_005385794 MODEL 8984297 protein-coding Ctsd cathepsin D ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); aspartic-type peptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); execution phase of apoptosis (ortholog); PARTICIPATES IN ceramide signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog); endosome lumen (ortholog); endosome membrane (ortholog) NW_004955422 13576315 13584267 - 102028645 AGCD01022835;GBCB01005314;GBCE01002329;XM_005384179 XP_005384236 MODEL 9031869 protein-coding LOC102017848 retinol dehydrogenase 16-like NW_004955458 4717769 4736029 - 102017848 AGCD01047433;AGCD01047434;AGCD01047435;AGCD01047436;GBDJ01117348;XM_005397335;XM_013520789 XP_005397392;XP_013376243 MODEL 8945118 protein-coding Dusp11 dual specificity phosphatase 11 ENCODES a protein that exhibits phosphatase activity (ortholog); polynucleotide 5'-phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955424 11978118 11990169 - 102011458 AGCD01024584;GBDK01239255;XM_005385545;XM_005385546 XP_005385602;XP_005385603 MODEL 8864639 protein-coding Eva1b eva-1 homolog B NW_004955452 14296607 14298331 - 102004667 AGCD01044463;GBDK01020136;XM_013519505 XP_013374959 MODEL 8987797 pseudo LOC102019451 arylacetamide deacetylase-like NW_004955448 3159746 3167553 - 102019451 AGCD01041306 MODEL 9059263 protein-coding Cldn22 claudin 22 NW_004955403 25480063 25481646 + 102010968 AGCD01002289;GBDI01210680;XM_005373506 XP_005373563 MODEL 9046146 ncrna LOC102016341 uncharacterized LOC102016341 NW_004955453 7778423 7824063 - 102016341 AGCD01044753;GBDF01155610;XR_262717;XR_262718 MODEL 8959994 pseudo LOC102014078 chromobox protein homolog 3 pseudogene NW_004955433 15960858 15962895 - 102014078 AGCD01031778 MODEL 8811747 protein-coding Aoc1 amine oxidase copper containing 1 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); diamine oxidase activity (ortholog); INVOLVED IN putrescine metabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN bicellular tight junction (ortholog); extracellular exosome (ortholog); extracellular space (ortholog) NW_004955491 5316482 5326262 + 102026986 AGCD01060477;AGCD01060478;GBCQ01033148;XM_005404798;XM_013504575 XP_005404855;XP_013360029 MODEL 8966427 ncrna LOC102005799 uncharacterized LOC102005799 NW_004955476 1188807 1194269 + 102005799 AGCD01055201;GBDK01109467;XR_263617 MODEL 9052849 ncrna LOC102013707 uncharacterized LOC102013707 NW_004955465 9394348 9420768 + 102013707 AGCD01050492;GBDF01054810;XR_263261 MODEL 8750271 protein-coding LOC102007948 leukocyte immunoglobulin-like receptor subfamily B member 3 NW_004955567 1160961 1183994 + 102007948 AGCD01074460;AGCD01074461;GBCE01168958;XM_005413368;XM_013509271;XM_013509272;XM_013509273;XM_013509274;XM_013509275;XM_013509276;XM_013509277;XM_013509278 XP_005413425;XP_013364725;XP_013364726;XP_013364727;XP_013364728;XP_013364729;XP_013364730;XP_013364731;XP_013364732 MODEL 9001268 protein-coding Abcc6 ATP binding cassette subfamily C member 6 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN ATP metabolic process (ortholog); ATP transport (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; ASSOCIATED WITH Animal Disease Models (ortholog); arterial calcification of infancy (ortholog); beta thalassemia (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955442 865292 921739 - 102028136 AGCD01037429;AGCD01037430;GBCQ01155383;XM_005391081 XP_005391138 MODEL 39131771 rrna 5S_rRNA 5S ribosomal RNA 8746332 protein-coding LOC102014478 prolactin-like NW_004955432 4314224 4338252 + 102014478 AGCD01030711;AGCD01030712;AGCD01030713;GBDJ01138352;XM_005387972 XP_005388029 MODEL 8987708 ncrna LOC102014840 uncharacterized LOC102014840 NW_004955447 7106725 7110886 - 102014840 AGCD01040810;GBCQ01058333;XR_001235754 MODEL 8780747 protein-coding LOC102008677 deoxynucleotidyltransferase terminal-interacting protein 2-like NW_004955572 1393253 1395378 - 102008677 AGCD01074950;XM_013509439 XP_013364893 MODEL 9010572 pseudo LOC102021239 ras-related protein Rab-33B pseudogene NW_004955475 1677079 1677769 + 102021239 AGCD01054758 MODEL 8992758 protein-coding Elfn1 extracellular leucine rich repeat and fibronectin type III domain containing 1 INVOLVED IN chemical synaptic transmission (ortholog); establishment of protein localization (ortholog); synapse assembly (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); excitatory synapse (ortholog) NW_004955460 9250522 9305895 + 102021212 AGCD01048542;AGCD01048543;GBDJ01337944;XM_005397815;XM_005397816;XM_013521103 XP_005397872;XP_005397873;XP_013376557 MODEL 8769986 protein-coding CUNH8orf74 chromosome unknown C8orf74 homolog NW_004955403 52224529 52240276 + 102023548 AGCD01003003;GBDF01046056;XM_005373805 XP_005373862 MODEL 8712105 protein-coding Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon ENCODES a protein that exhibits identical protein binding (ortholog); IkappaB kinase activity (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to virus (ortholog); gene expression (ortholog); immune response (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial membrane (ortholog) NW_004955406 42056014 42077701 + 102017949 AGCD01006696;GBDK01143454;XM_005375388;XM_005375389;XM_005375390;XM_005375392;XM_005375393 XP_005375445;XP_005375446;XP_005375447;XP_005375449;XP_005375450 MODEL 8902003 pseudo LOC102021938 casein kinase I isoform epsilon pseudogene NW_004955452 11410970 11412430 - 102021938 AGCD01044335;AGCD01044336;XM_005395310 MODEL 39133981 misc_rna 7SK 7SK RNA 8772410 protein-coding Katnal1 katanin catalytic subunit A1 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule severing ATPase activity (ortholog); INVOLVED IN microtubule severing (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955431 15534032 15616623 + 102022628 AGCD01030361;AGCD01030362;AGCD01030363;AGCD01030364;GBBH01201058;XM_005387747;XM_005387748;XM_005387749;XM_005387750 XP_005387804;XP_005387805;XP_005387806;XP_005387807 MODEL 8983235 protein-coding LOC102019452 cytochrome b reductase 1 ENCODES a protein that exhibits identical protein binding (ortholog); oxidoreductase activity, acting on metal ions (ortholog); transmembrane ascorbate ferrireductase activity (ortholog); INVOLVED IN ascorbate homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); membrane (ortholog) NW_004955449 3368976 3394405 - 102019452 AGCD01041848;AGCD01041849;AGCD01041850;AGCD01041851;GBCE01000144;XM_005393233;XM_013518792 XP_005393290;XP_013374246 MODEL 9015689 ncrna LOC102011358 uncharacterized LOC102011358 NW_004955436 18358012 18378034 - 102011358 AGCD01033960;GBDF01225067;XR_001234940 MODEL 8878215 pseudo LOC102020462 60S ribosomal protein L39 pseudogene NW_004955499 8125958 8126152 - 102020462 AGCD01063618 MODEL 8857247 protein-coding Kdf1 keratinocyte differentiation factor 1 INVOLVED IN developmental growth (ortholog); epidermal cell differentiation (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia 12 (ortholog); genetic disease (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); cell leading edge (ortholog) NW_004955452 6280391 6288985 - 102026068 AGCD01044100;AGCD01044101;GBDI01070239;XM_005394888;XM_005394890;XM_005394891;XM_005394892;XM_005394893 XP_005394945;XP_005394947;XP_005394948;XP_005394949;XP_005394950 MODEL 39131635 rrna 5S_rRNA 5S ribosomal RNA 9036680 protein-coding Aopep aminopeptidase O (putative) ASSOCIATED WITH atrial fibrillation (ortholog); breast cancer (ortholog); dystonia 31 (ortholog); FOUND IN nucleolus (ortholog) NW_004955422 21680488 22020935 + 102004493 AGCD01023138;AGCD01023139;AGCD01023140;AGCD01023141;AGCD01023142;AGCD01023143;AGCD01023144;AGCD01023145;GBDF01016215;XM_013513835 XP_013369289 MODEL 9039599 protein-coding LOC102010591 acyl-CoA desaturase 1 NW_004955485 9758703 9773277 + 102010591 AGCD01058780;GBDK01014034;XM_005403913 XP_005403970 MODEL 8830919 protein-coding Cripto cripto, EGF-CFC family member ENCODES a protein that exhibits coreceptor activity (ortholog); growth factor activity (ortholog); nodal binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); anterior/posterior axis specification, embryo (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH colon cancer (ortholog); congenital heart disease (ortholog); Forebrain Defects (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955420 25476975 25479969 - 102024468 AGCD01021362;GBCE01122409;XM_005383436 XP_005383493 MODEL 8701297 protein-coding LOC102015958 zinc finger protein 208-like NW_004955482 102076 193169 - 102015958 AGCD01057161;AGCD01057162;AGCD01057163;AGCD01057164;AGCD01057165;GBCE01005323;XM_005402935 XP_005402992 MODEL 8936301 protein-coding LOC102015580 myosin regulatory light chain 12B NW_004955402 7237291 7251530 - 102015580 AGCD01000168;AGCD01000169;GBCE01001461;XM_005372655 XP_005372712 MODEL 8766280 pseudo LOC102009073 uncharacterized LOC102009073 NW_004955422 6052412 6078239 - 102009073 AGCD01022588;AGCD01022589 MODEL 8871819 ncrna LOC102024660 uncharacterized LOC102024660 NW_004955465 5887798 5910079 - 102024660 AGCD01050433;AGCD01050434;AGCD01050435;GBCQ01057754;XR_001236758;XR_001236759;XR_001236760;XR_263238 MODEL 8862071 pseudo LOC102005801 ewing's tumor-associated antigen 1 pseudogene NW_004955476 28845 38954 + 102005801 AGCD01055190 MODEL 8921300 pseudo LOC102007950 tubulin-specific chaperone A-like NW_004955446 19105862 19111198 + 102007950 AGCD01040423 MODEL 8883071 protein-coding Dennd6a DENN domain containing 6A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of cell-cell adhesion mediated by cadherin (ortholog); FOUND IN cytoplasm (ortholog); recycling endosome (ortholog) NW_004955430 7327602 7396961 - 102015751 AGCD01029348;AGCD01029349;GBDJ01008907;XM_005387413;XM_013515601;XM_013515602;XM_013515603 XP_005387470;XP_013371055;XP_013371056;XP_013371057 MODEL 8718756 protein-coding Fgd2 FYVE, RhoGEF and PH domain containing 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phosphate binding (ortholog); INVOLVED IN positive regulation of JUN kinase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); ovarian cyst (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); nucleus (ortholog) NW_004955437 6026087 6038740 - 102021388 AGCD01034413;AGCD01034414;GBDK01184372;XM_005389626;XM_005389627;XM_005389628;XM_013516942;XM_013516943 XP_005389683;XP_005389684;XP_005389685;XP_013372396;XP_013372397 MODEL 8947478 protein-coding LOC102013365 vomeronasal type-1 receptor 4-like NW_004955609 69961 70845 - 102013365 AGCD01077050;XM_005414936 XP_005414993 MODEL 39131772 rrna 5S_rRNA 5S ribosomal RNA 9064683 protein-coding Cldn23 claudin 23 INVOLVED IN intracellular protein localization (ortholog); tight junction organization (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog) NW_004955463 4740476 4742283 + 102016991 AGCD01049615;GBCE01025230;XM_005398354 XP_005398411 MODEL 8898684 protein-coding C2cd2l C2CD2 like ENCODES a protein that exhibits insulin binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH RASopathy (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasmic side of apical plasma membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955412 20214915 20232260 + 102026620 AGCD01012997;AGCD01012998;AGCD01012999;GBBH01060462;GBDF01279346;XM_005378305;XM_013511211 XP_005378362;XP_013366665 MODEL 8962851 protein-coding Dlx5 distal-less homeobox 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Birth Weight (ortholog); bone development disease (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955432 13429832 13434160 - 102021270 AGCD01031016;GBDJ01090320;XM_005388074;XM_005388075 XP_005388131;XP_005388132 MODEL 8896589 protein-coding Eva1c eva-1 homolog C ENCODES a protein that exhibits heparin binding (ortholog); FOUND IN extracellular region (ortholog) NW_004955407 31934954 32043827 + 102016021 AGCD01007663;AGCD01007664;AGCD01007665;AGCD01007666;AGCD01007667;AGCD01007668;GBCE01085482;XM_005375667;XM_005375668;XM_005375669;XM_013504147;XM_013504151;XM_013504153 XP_005375724;XP_005375725;XP_005375726;XP_013359601;XP_013359605;XP_013359607 MODEL 9022008 protein-coding Hypk huntingtin interacting protein K ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); protein stabilization (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 10258357 10259699 + 102011762 AGCD01017126;GBDJ01074318;XM_005381406;XM_013512561 XP_005381463;XP_013368015 MODEL 8880640 ncrna LOC102012964 uncharacterized LOC102012964 NW_004955418 2720066 2727457 + 102012964 AGCD01018774;GBDF01250695;XR_001233484;XR_001233485 MODEL 8997329 ncrna LOC102012202 uncharacterized LOC102012202 NW_004955420 8650206 8667134 - 102012202 AGCD01020729;AGCD01020730;GBDF01286252;XR_260684 MODEL 8838219 ncrna LOC102011818 uncharacterized LOC102011818 NW_004955567 1491834 1498408 + 102011818 AGCD01074476;GBDK01309694;XR_001232411;XR_001232412 MODEL 8865657 protein-coding Dclre1a DNA cross-link repair 1A ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); beta-lactamase activity (ortholog); INVOLVED IN nucleotide-excision repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955431 18812951 18831744 - 102012350 AGCD01030435;AGCD01030436;GBDI01323627;XM_005387808;XM_005387809 XP_005387865;XP_005387866 MODEL 8761964 protein-coding Acsl1 acyl-CoA synthetase long chain family member 1 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine palmitoyltransferase I deficiency pathway; carnitine-acylcarnitine translocase deficiency; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cardiomyopathy (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955403 24190674 24235354 + 102004133 AGCD01002270;AGCD01002271;GBCB01035722;XM_005373482;XM_013513016;XM_013513022 XP_005373539;XP_013368470;XP_013368476 MODEL 8883967 pseudo LOC102014079 10 kDa heat shock protein, mitochondrial pseudogene NW_004955521 2000294 2000598 + 102014079 AGCD01068200 MODEL 10383227 ncrna LOC106150020 uncharacterized LOC106150020 NW_004955460 11158234 11160468 + 106150020 AGCD01048630;GBCQ01163568;XR_001236542 MODEL 8937498 protein-coding Grpr gastrin releasing peptide receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); neuropeptide binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); learning or memory (ortholog); motor behavior (ortholog); ASSOCIATED WITH Memory Disorders (ortholog); Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955519 2032500 2063292 - 102009412 AGCD01067913;AGCD01067914;XM_005409151 XP_005409208 MODEL 8788322 ncrna LOC102003977 uncharacterized LOC102003977 NW_004955492 6357508 6415069 - 102003977 AGCD01060766;GBCQ01139758;XR_264056;XR_264057 MODEL 8830394 protein-coding Inpp1 inositol polyphosphate-1-phosphatase PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); cleft palate (ortholog); retinal disease (ortholog) NW_004955403 8713565 8742725 - 102030142 AGCD01001887;AGCD01001888;AGCD01001889;GBDK01142523;XM_005373303;XM_005373304;XM_005373305;XM_005373306;XM_013512293;XM_013512299;XM_013512307 XP_005373360;XP_005373361;XP_005373362;XP_005373363;XP_013367747;XP_013367753;XP_013367761 MODEL 9062199 ncrna LOC102008678 uncharacterized LOC102008678 NW_004955449 1311463 1320185 + 102008678 AGCD01041795;AGCD01041796;GBCB01051011;XR_001235820;XR_001235821;XR_262484 MODEL 8832465 ncrna LOC102016342 uncharacterized LOC102016342 NW_004955453 15162871 15192421 - 102016342 AGCD01044886;GBDF01074770;XR_262743;XR_262744 MODEL 8741711 protein-coding Crispld1 cysteine rich secretory protein LCCL domain containing 1 INVOLVED IN face morphogenesis (ortholog); hematopoietic stem cell homeostasis (ortholog) NW_004955444 5495253 5536277 - 102018235 AGCD01038832;AGCD01038833;GBCQ01103769;GBDI01161979;XM_013518125 XP_013373579 MODEL 8776522 ncrna LOC102016686 uncharacterized LOC102016686 NW_004955412 23184815 23258137 + 102016686 AGCD01013067;AGCD01013068;AGCD01013069;GBDF01222189;XR_001232917;XR_260013 MODEL 8890226 protein-coding Trex2 three prime repair exonuclease 2 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); DNA binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN DNA metabolic process (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); intellectual disability (ortholog) NW_004955580 207903 209426 - 102010534 AGCD01075591;GBDF01123808;XM_005414119 XP_005414176 MODEL 39132538 rrna 5S_rRNA 5S ribosomal RNA 8939819 protein-coding Fgd3 FYVE, RhoGEF and PH domain containing 3 INVOLVED IN filopodium assembly (ortholog) NW_004955515 4967862 5025604 - 102025497 AGCD01067334;GBBH01035013;XM_013506892;XM_013506893;XM_013506894;XM_013506896;XM_013506897;XM_013506898;XM_013506899 XP_013362346;XP_013362347;XP_013362348;XP_013362350;XP_013362351;XP_013362352;XP_013362353 MODEL 8764958 ncrna LOC102008318 uncharacterized LOC102008318 NW_004955484 4122273 4129579 - 102008318 AGCD01058202;GBDF01081938;XR_263880;XR_263882 MODEL 8846483 ncrna LOC102013708 uncharacterized LOC102013708 NW_004955466 8458324 8467859 - 102013708 AGCD01050989;GBCB01072536;XR_001236826;XR_001236827 MODEL 8824199 ncrna LOC102014481 uncharacterized LOC102014481 NW_004955434 16811809 16818079 - 102014481 AGCD01032533;XR_261621 MODEL 8887067 protein-coding LOC102011365 immunoglobulin iota chain NW_004955442 17173705 17174412 - 102011365 AGCD01037944;GBBH01018271;XM_005391688 XP_005391745 MODEL 8782195 pseudo LOC102014844 mitochondrial pyruvate carrier 1 pseudogene NW_004955583 529983 530718 + 102014844 AGCD01075834 MODEL 9059248 ncrna LOC102009427 uncharacterized LOC102009427 NW_004955442 18649285 18656714 - 102009427 AGCD01038012;GBDF01055895;XR_262168 MODEL 9049295 protein-coding Dusp12 dual specificity phosphatase 12 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); positive regulation of hexokinase activity (ortholog); protein dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955462 14555919 14565046 - 102016678 AGCD01049450;GBCB01001840;XM_005398286;XM_005398287;XM_013521439 XP_005398343;XP_005398344;XP_013376893 MODEL 8859537 protein-coding Ctse cathepsin E ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); protein autoprocessing (ortholog); proteolysis (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endosome (ortholog) NW_004955406 41641412 41653261 - 102015922 AGCD01006688;GBCQ01167818;XM_005375381;XM_005375382 XP_005375438;XP_005375439 MODEL 8826056 protein-coding LOC102017852 mast cell protease 4-like NW_004955409 35817333 35819685 + 102017852 AGCD01010433;XM_005377176 XP_005377233 MODEL 8752185 protein-coding Aox1 aldehyde oxidase 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); aldehyde oxidase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN NAD+ catabolic process (ortholog); xenobiotic metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955403 827538 875856 - 102005540 AGCD01001708;AGCD01001709;GBCC01021803;XM_005373246 XP_005373303 MODEL 8902871 ncrna LOC102009080 uncharacterized LOC102009080 NW_004955502 7625008 7627557 + 102009080 AGCD01064452;GBDF01238432;XR_264267 MODEL 8950552 protein-coding Elfn2 extracellular leucine rich repeat and fibronectin type III domain containing 2 INVOLVED IN chemical synaptic transmission (ortholog); establishment of protein localization (ortholog); gene expression (ortholog); FOUND IN postsynaptic density membrane (ortholog); synapse (ortholog) NW_004955413 23805494 23862067 - 102030621 AGCD01014335;AGCD01014336;AGCD01014337;GBDF01124369;XM_005379199;XM_005379200;XM_005379201;XM_013511682;XM_013511683;XM_013511684;XM_013511685;XM_013511686;XM_013511687;XM_013511688 XP_005379256;XP_005379257;XP_005379258;XP_013367136;XP_013367137;XP_013367138;XP_013367139;XP_013367140;XP_013367141;XP_013367142 MODEL 39131916 rrna 5S_rRNA 5S ribosomal RNA 8737038 protein-coding CUNH8orf76 chromosome unknown C8orf76 homolog NW_004955540 2097912 2115921 - 102028896 AGCD01071312;AGCD01071313;AGCD01071314;GBDF01157584;XM_005410922;XM_005410923 XP_005410979;XP_005410980 MODEL 8925844 protein-coding LOC102024662 olfactory receptor 958 NW_004955412 24894780 24897398 + 102024662 AGCD01013130;XM_005378641 XP_005378698 MODEL 8763848 protein-coding LOC102015959 N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 1 NW_004955419 6564839 6604214 + 102015959 AGCD01019859;AGCD01019860;XM_005382563;XM_005382565 XP_005382620;XP_005382622 MODEL 8776917 protein-coding Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ENCODES a protein that exhibits identical protein binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); linear polyubiquitin binding (ortholog); INVOLVED IN anoikis (ortholog); B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN FasL mediated signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); Behcet's disease (ortholog); Bloch-Sulzberger syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); IkappaB kinase complex (ortholog) NW_004955580 1053823 1069802 + 102006084 AGCD01075642;AGCD01075643;GBDI01021108;XM_005414210;XM_005414211;XM_005414213;XM_005414214;XM_013509705;XM_013509706 XP_005414267;XP_005414268;XP_005414270;XP_005414271;XP_013365159;XP_013365160 MODEL 8975797 protein-coding Dennd6b DENN domain containing 6B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog) NW_004955413 33324081 33336518 - 102025995 AGCD01014663;GBBH01065557;GBCE01074576;XM_005379556 XP_005379613 MODEL 39131773 rrna 5S_rRNA 5S ribosomal RNA 8825687 protein-coding Cldn24 claudin 24 FOUND IN apical plasma membrane (ortholog) NW_004955403 25478478 25479173 + 102010657 AGCD01002289;XM_005373505 XP_005373562 MODEL 8759282 pseudo LOC102020465 glutamine synthetase-like NW_004955501 7599438 7600949 - 102020465 AGCD01064219 MODEL 8804450 protein-coding LOC102019456 cytochrome c oxidase assembly protein COX11, mitochondrial INVOLVED IN ATP biosynthetic process (ortholog); intracellular monoatomic cation homeostasis (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); mitochondrial complex IV deficiency nuclear type 23 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955451 7635704 7642724 + 102019456 AGCD01043243;GBDF01193101;XM_005394089 XP_005394146 MODEL 8752979 protein-coding LOC102012965 uncharacterized LOC102012965 NW_004955481 9182564 9207329 + 102012965 AGCD01057096;AGCD01057097;GBDF01015936;XM_005402931 XP_005402988 MODEL 8976350 protein-coding Dlx6 distal-less homeobox 6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); split hand-foot malformation 1 (ortholog); Weissenbacher-Zweymuller syndrome (ortholog) NW_004955432 13415039 13420506 + 102020943 AGCD01031015;AGCD01031016;GBDJ01001146;XM_005388073;XR_001234676 XP_005388130 MODEL 39131636 rrna 5S_rRNA 5S ribosomal RNA 8782805 gene LOC102010596 T-cell receptor beta-1 chain C region-like NW_004955494 1000095 1115539 - 102010596 AGCD01061390;AGCD01061391;XM_005405393 MODEL 8921689 protein-coding Abcc8 ATP binding cassette subfamily C member 8 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to nutrient levels (ortholog); female pregnancy (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; altered insulin secretion pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); brain edema (ortholog); Brain Injuries (ortholog); FOUND IN inward rectifying potassium channel (ortholog); plasma membrane (ortholog); presynaptic membrane (ortholog) NW_004955414 32216243 32289028 - 102010794 AGCD01015777;GBDI01053758;XM_005380385;XM_005380386;XM_013512092;XM_013512093 XP_005380442;XP_005380443;XP_013367546;XP_013367547 MODEL 8883284 ncrna LOC102021241 uncharacterized LOC102021241 NW_004955418 6388627 6419369 - 102021241 AGCD01018875;GBDF01074556;XR_260540 MODEL 8753560 ncrna LOC102015581 uncharacterized LOC102015581 NW_004955589 627175 631403 - 102015581 AGCD01076179;GBDF01248806;XR_265121 MODEL 8926324 pseudo LOC102014482 THUMP domain-containing protein 1 pseudogene NW_004955523 1578367 1580804 - 102014482 AGCD01068527 MODEL 8750726 pseudo LOC102021251 60S ribosomal protein L23a pseudogene NW_004955493 6861814 6862285 + 102021251 AGCD01061146 MODEL 8838990 protein-coding LOC102013366 olfactory receptor 2L13-like NW_004955619 101327 102265 + 102013366 AGCD01077337;XM_005415005 XP_005415062 MODEL 9062800 protein-coding Inpp4a inositol polyphosphate-4-phosphatase type I A INVOLVED IN regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autosomal dominant dyskeratosis congenita 1 (ortholog); basal cell carcinoma (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nuclear membrane (ortholog) NW_004955470 4930568 5040153 + 102003011 AGCD01052741;AGCD01052742;GBDF01050934;XM_005400714;XM_005400715;XM_005400718;XM_005400720;XM_005400722;XM_013522723;XM_013522724;XM_013522726;XM_013522727;XM_013522728;XM_013522729;XM_013522730;XM_013522732 XP_005400771;XP_005400772;XP_005400775;XP_005400777;XP_005400779;XP_013378177;XP_013378178;XP_013378180;XP_013378181;XP_013378182;XP_013378183;XP_013378184;XP_013378186 MODEL 8734773 protein-coding Hypm huntingtin interacting protein M NW_004955601 38906 39259 + 102029686 AGCD01076744;XM_005414824 XP_005414881 MODEL 8706583 protein-coding LOC102012203 dual specificity protein phosphatase 5-like NW_004955485 904628 909295 - 102012203 AGCD01058465;GBDK01430993;XM_005403917 XP_005403974 MODEL 8943139 protein-coding Dclre1b DNA cross-link repair 1B ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); beta-lactamase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); protection from non-homologous end joining at telomere (ortholog); telomere capping (ortholog); ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita 8 (ortholog); Fanconi anemia complementation group C (ortholog); Hoyeraal-Hreidarsson Syndrome (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); nuclear body (ortholog) NW_004955435 17173975 17179986 + 102029438 AGCD01033347;GBCQ01155004;XM_005389108 XP_005389165 MODEL 9027317 protein-coding Kdm1a lysine demethylase 1A ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to cAMP (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN histone modification pathway; Notch signaling pathway; ASSOCIATED WITH ACTH-independent Macronodular Adrenal Hyperplasia 3 (ortholog); alopecia areata (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); DNA repair complex (ortholog) NW_004955452 3044042 3104650 + 102014206 AGCD01043910;AGCD01043911;AGCD01043912;GBBH01143986;GBDF01212309;XM_013519586;XM_013519587 XP_013375040;XP_013375041 MODEL 8860210 protein-coding LOC102014081 vomeronasal type-2 receptor 116-like NW_004955524 3713189 3734931 + 102014081 AGCD01068924;AGCD01068925;XM_013507199 XP_013362653 MODEL 10262080 ncrna LOC106150021 uncharacterized LOC106150021 NW_004955460 11121174 11128894 - 106150021 AGCD01048629;XR_001236543;XR_001236544 MODEL 9034251 protein-coding Ikzf1 IKAROS family zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); B cell differentiation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); chronic myelogenous leukemia, BCR-ABL1 positive (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); pericentric heterochromatin (ortholog) NW_004955456 3617988 3721791 - 102029707 AGCD01046278;AGCD01046279;AGCD01046280;GBDJ01115764;XM_005396609;XM_005396610;XM_005396617;XM_013520610;XM_013520611;XM_013520612;XM_013520613;XM_013520614;XM_013520615;XM_013520616;XM_013520617;XM_013520618 XP_005396666;XP_005396667;XP_005396674;XP_013376064;XP_013376065;XP_013376066;XP_013376067;XP_013376068;XP_013376069;XP_013376070;XP_013376071;XP_013376072 MODEL 8790776 protein-coding Grsf1 G-rich RNA sequence binding factor 1 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); morphogenesis of embryonic epithelium (ortholog); positive regulation of mitochondrial RNA catabolic process (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955447 2181841 2194650 + 102022138 AGCD01040535;GBBH01060226;GBCB01002036;XM_005392775 XP_005392832 MODEL 9017552 ncrna LOC102008323 uncharacterized LOC102008323 NW_004955421 4100911 4102982 - 102008323 AGCD01021680;GBDF01307160;XR_260787 MODEL 8739963 protein-coding LOC102007951 cytochrome P450 3A9-like NW_004955573 1323275 1354705 - 102007951 AGCD01075041;AGCD01075042;AGCD01075043;AGCD01075044;XM_013509451 XP_013364905 MODEL 8844504 protein-coding LOC102020471 uncharacterized LOC102020471 NW_004955510 3482252 3513382 - 102020471 AGCD01066236;AGCD01066237;AGCD01066238;AGCD01066239;GBDF01177513;XM_005407930 XP_005407987 MODEL 9039450 pseudo LOC102005802 60S ribosomal protein L37 pseudogene NW_004955416 8201222 8202250 - 102005802 AGCD01017037;XR_260372 MODEL 8768356 protein-coding LOC102009432 olfactory receptor 7G2-like NW_004955563 246588 247514 + 102009432 AGCD01074056;XM_005413197 XP_005413254 MODEL 39133982 misc_rna 7SK 7SK RNA 9041652 pseudo LOC102008680 wiskott-Aldrich syndrome protein family member 1 pseudogene NW_004955403 9508735 9510324 + 102008680 AGCD01001908 MODEL 9002837 protein-coding Katnal2 katanin catalytic subunit A1 like 2 ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament cytoskeleton (ortholog); microtubule (ortholog) NW_004955402 32407994 32490009 + 102005652 AGCD01000823;AGCD01000824;GBBH01219161;XM_005372884;XM_013510496;XM_013510499;XM_013510502 XP_005372941;XP_013365950;XP_013365953;XP_013365956 MODEL 39131936 rrna 5S_rRNA 5S ribosomal RNA 8892110 protein-coding C2cd3 C2 domain containing 3 centriole elongation regulator INVOLVED IN brain development (ortholog); centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955414 17444299 17557912 + 102008934 AGCD01015241;AGCD01015242;AGCD01015243;GBDF01118457;XM_013511935;XM_013511936;XM_013511937 XP_013367389;XP_013367390;XP_013367391 MODEL 9055027 pseudo LOC102011820 kelch repeat and BTB domain-containing protein 2 pseudogene NW_004955446 5926616 5937581 - 102011820 AGCD01040081 MODEL 8715569 protein-coding LOC102014488 eukaryotic initiation factor 4A-I-like NW_004955537 31525 32199 + 102014488 AGCD01070847;GBDF01010973;XM_013507746 XP_013363200 MODEL 8921459 ncrna LOC102020819 uncharacterized LOC102020819 NW_004955501 3904899 3906820 + 102020819 AGCD01064106;GBDF01122276;XR_264252 MODEL 8905341 protein-coding Evc EvC ciliary complex subunit 1 INVOLVED IN cartilage development (ortholog); endochondral bone growth (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Ellis-Van Creveld syndrome (ortholog); genetic disease (ortholog); nephronophthisis (ortholog); FOUND IN ciliary basal body (ortholog); ciliary membrane (ortholog); cilium (ortholog) NW_004955514 4279603 4330897 - 102022418 AGCD01067129;AGCD01067130;AGCD01067131;GBCQ01005915;XM_013506839;XM_013506840;XM_013506841;XR_001231780 XP_013362293;XP_013362294;XP_013362295 MODEL 8898335 protein-coding CUNH8orf82 chromosome unknown C8orf82 homolog FOUND IN mitochondrion (ortholog) NW_004955454 3150021 3153602 - 102015601 AGCD01045057;GBCB01059809;XM_005395922;XR_001236225;XR_001236226 XP_005395979 MODEL 8764765 protein-coding Denr density regulated re-initiation and release factor INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); FOUND IN cytoplasm (ortholog) NW_004955482 5954319 5970832 - 102027851 AGCD01057357;AGCD01057358;AGCD01057359;GBCB01020540;XM_005403074 XP_005403131 MODEL 8880687 protein-coding LOC102015961 zinc finger protein 709-like NW_004955420 30097025 30113249 + 102015961 AGCD01021533;AGCD01021534;GBDI01091409;XM_005383585;XM_013513538 XP_005383642;XP_013368992 MODEL 8808575 protein-coding Acsl3 acyl-CoA synthetase long chain family member 3 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); long-chain fatty acid import into cell (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH asthma (ortholog); breast cancer (ortholog); Experimental Allergic Asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); lipid droplet (ortholog) NW_004955453 10916423 10963986 - 102022564 AGCD01044793;AGCD01044794;AGCD01044795;GBCE01118896;XM_005395491 XP_005395548 MODEL 39131637 rrna 5S_rRNA 5S ribosomal RNA 8873501 protein-coding LOC102003981 cytochrome P450 4F6-like NW_004955495 7714402 7725532 - 102003981 AGCD01062160;GBDF01159203;XM_005406063;XM_013505320;XM_013505321 XP_005406120;XP_013360774;XP_013360775 MODEL 8974742 pseudo LOC102011366 protein RUFY3 pseudogene NW_004955442 14907176 14908675 + 102011366 AGCD01037848 MODEL 8741055 protein-coding LOC102014853 chymase-like NW_004956248 3515 5792 + 102014853 AGCD01079309;GBDI01200795;XM_005415185 XP_005415242 MODEL 8722924 ncrna LOC102021242 uncharacterized LOC102021242 NW_004955419 7042095 7105331 - 102021242 AGCD01019869;AGCD01019870;AGCD01019871;AGCD01019872;AGCD01019873;GBDI01189022;XR_001233597;XR_260612 MODEL 8784639 protein-coding Dusp14 dual specificity phosphatase 14 ASSOCIATED WITH pulmonary tuberculosis (ortholog) NW_004955451 515889 537762 - 102023547 AGCD01042937;AGCD01042938;GBCE01077211;XM_005393924;XM_005393925;XM_005393926;XM_013519169;XM_013519170;XM_013519171 XP_005393981;XP_005393982;XP_005393983;XP_013374623;XP_013374624;XP_013374625 MODEL 8997221 protein-coding Ctsf cathepsin F ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog) NW_004955422 18794207 18799245 + 102007564 AGCD01022961;GBDF01006473;XM_013514058 XP_013369512 MODEL 616940622 protein-coding TRGC1 T cell receptor gamma constant 1 8783093 protein-coding LOC102024663 T-cell surface glycoprotein CD1e, membrane-associated-like NW_004955468 10224376 10227747 + 102024663 AGCD01052074;GBDF01171361;XM_005400148;XM_013522340 XP_005400205;XP_013377794 MODEL 39132539 rrna 5S_rRNA 5S ribosomal RNA 8769012 protein-coding Crispld2 cysteine rich secretory protein LCCL domain containing 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); face morphogenesis (ortholog); lung development (ortholog); ASSOCIATED WITH liver disease (ortholog); lung disease (ortholog); toxic encephalopathy (ortholog); FOUND IN extracellular matrix (ortholog); transport vesicle (ortholog) NW_004955541 324623 369690 + 102015569 AGCD01071350;AGCD01071351;GBDF01253542;XM_005410966 XP_005411023 MODEL 39131774 rrna 5S_rRNA 5S ribosomal RNA 8968284 protein-coding Elk1 ETS transcription factor ELK1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to lipid (ortholog); cellular response to testosterone stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anxiety disorder (ortholog); Brain Injuries (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); mitochondrial membrane (ortholog) NW_004955516 431081 444871 + 102015338 AGCD01067385;GBCE01187012;XM_005408941;XM_005408942 XP_005408998;XP_005408999 MODEL 9030165 protein-coding LOC102021253 zinc finger protein 426 NW_004955495 883506 889089 - 102021253 AGCD01061658;AGCD01061659;AGCD01061660;GBCE01152430;GBDI01011093;XM_013505048 XP_013360502 MODEL 8719200 protein-coding Inpp4b inositol polyphosphate-4-phosphatase type II B ENCODES a protein that exhibits lipid binding (ortholog); phosphatidylinositol bisphosphate phosphatase activity (ortholog); phosphatidylinositol trisphosphate phosphatase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); negative regulation of osteoclast differentiation (ortholog); phosphatidylinositol dephosphorylation (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); pancreatic cancer (ortholog) NW_004955471 938005 1291695 + 102010359 AGCD01052969;AGCD01052970;AGCD01052971;AGCD01052972;AGCD01052973;AGCD01052974;GBDF01155666;XM_005400855;XM_005400857;XM_005400858 XP_005400912;XP_005400914;XP_005400915 MODEL 8775370 ncrna LOC102019457 uncharacterized LOC102019457 NW_004955676 10316 15752 - 102019457 AGCD01077974;AGCD01077975;GBCE01027582;XR_265182 MODEL 8990945 protein-coding LOC102013712 olfactory receptor 10A5 NW_004955414 22744451 22787701 + 102013712 AGCD01015473;AGCD01015474;AGCD01015475;AGCD01015476;AGCD01015477;AGCD01015478;XM_013511738 XP_013367192 MODEL 39131775 rrna 5S_rRNA 5S ribosomal RNA 8884522 protein-coding Abcc9 ATP binding cassette subfamily C member 9 ENCODES a protein that exhibits ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN action potential (ortholog); ATP metabolic process (ortholog); blood circulation (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); breast ductal carcinoma (ortholog); Brugada syndrome (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); inward rectifying potassium channel (ortholog) NW_004955413 17385966 17510220 - 102019791 AGCD01014150;AGCD01014151;AGCD01014152;AGCD01014153;AGCD01014154;AGCD01014155;AGCD01014156;GBDI01325169;XM_005379069;XM_013511594;XM_013511595;XM_013511596;XM_013511597;XM_013511598;XM_013511599;XM_013511600;XM_013511601;XM_013511602;XM_013511603 XP_005379126;XP_013367048;XP_013367049;XP_013367050;XP_013367051;XP_013367052;XP_013367053;XP_013367054;XP_013367055;XP_013367056;XP_013367057 MODEL 10101218 ncrna LOC106150022 uncharacterized LOC106150022 NW_004955460 8179 30699 + 106150022 AGCD01048326;AGCD01048327;AGCD01048328;AGCD01048329;GBDF01187346;XR_001236545;XR_001236546 MODEL 8731627 pseudo LOC102017856 40S ribosomal protein SA pseudogene NW_004955412 30610458 30611355 - 102017856 AGCD01013303 MODEL 8893762 protein-coding Acsl4 acyl-CoA synthetase long chain family member 4 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN dendritic spine development (ortholog); embryonic process involved in female pregnancy (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autism spectrum disorder (ortholog); depressive disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955490 6143833 6228395 + 102010170 AGCD01060217;AGCD01060218;GBCQ01006031;XM_005404662;XM_005404663;XM_013504536 XP_005404719;XP_005404720;XP_013359990 MODEL 8955665 protein-coding LOC102007953 olfactory receptor 2B6-like NW_004955576 1156143 1157078 + 102007953 AGCD01075361;XM_005413942 XP_005413999 MODEL 8971520 protein-coding Ap1ar adaptor related protein complex 1 associated regulatory protein ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); kinesin binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of cell motility (ortholog); negative regulation of receptor recycling (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); transport vesicle (ortholog) NW_004955457 14456414 14471584 - 102006317 AGCD01047073;GBCB01100575;XM_005397124 XP_005397181 MODEL 9004579 pseudo LOC102011370 olfactory receptor 7G1-like NW_004955563 374406 376655 + 102011370 AGCD01074064 MODEL 8717189 protein-coding LOC102008682 plakophilin-2-like NW_004956130 12 5617 + 102008682 AGCD01079104;GBDK01128349;GBDK01128352;XM_005415169 XP_005415226 MODEL 8876581 protein-coding Cldn25 claudin 25 FOUND IN apical plasma membrane (ortholog); tight junction (ortholog) NW_004955659 58925 59882 - 102015365 AGCD01077876;GBBH01126086;XM_005415246 XP_005415303 MODEL 8745580 protein-coding LOC102014491 olfactory receptor 6B2 NW_004955542 1323873 1325098 + 102014491 AGCD01071502;XM_005411244 XP_005411301 MODEL 8905081 pseudo LOC102010598 60S ribosomal protein L7-like 1 pseudogene NW_004955494 4924654 4934243 - 102010598 AGCD01061515 MODEL 8981785 protein-coding Dmac1 distal membrane arm assembly component 1 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955434 11530632 11539237 - 102014280 AGCD01032379;AGCD01032380;GBBH01140816;XM_005388752 XP_005388809 MODEL 8799439 ncrna LOC102024664 uncharacterized LOC102024664 NW_004955414 7606264 7623903 - 102024664 AGCD01014966;GBDF01041443;XR_260162 MODEL 9066159 protein-coding Dclre1c DNA cross-link repair 1C ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); single-stranded DNA endodeoxyribonuclease activity (ortholog); INVOLVED IN B cell differentiation (ortholog); chromosome organization (ortholog); DNA recombination (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Aicardi-Goutieres Syndrome 1 (ortholog); common variable immunodeficiency (ortholog); Ehlers-Danlos syndrome kyphoscoliotic type 1 (ortholog); FOUND IN nonhomologous end joining complex (ortholog); nucleoplasm (ortholog) NW_004955429 19461446 19501908 + 102006802 AGCD01028960;AGCD01028961;AGCD01028962;AGCD01028963;GBBH01180586;XM_005387152 XP_005387209 MODEL 9042075 protein-coding LOC102021257 olfactory receptor 7A10-like NW_004955495 8472724 8479391 + 102021257 AGCD01062211;XM_005406179 XP_005406236 MODEL 8719339 ncrna LOC102014084 uncharacterized LOC102014084 NW_004955437 20958744 20959376 - 102014084 AGCD01034893;GBDF01307365;XR_261899 MODEL 8801384 pseudo LOC102016344 aminoacyl tRNA synthase complex-interacting multifunctional protein 2 pseudogene NW_004955406 39899949 39901717 - 102016344 AGCD01006645 MODEL 8757362 pseudo LOC102009081 transcription factor CP2-like protein 1 pseudogene NW_004955503 2232097 2233831 + 102009081 AGCD01064604 MODEL 8723303 protein-coding Kdm4c lysine demethylase 4C ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); blastocyst formation (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); pericentric heterochromatin (ortholog) NW_004955434 10646524 11000589 + 102007806 AGCD01032358;AGCD01032359;AGCD01032360;AGCD01032361;AGCD01032362;AGCD01032363;AGCD01032364;AGCD01032365;AGCD01032366;AGCD01032367;AGCD01032368;AGCD01032369;GBDJ01371221;XM_005388674 XP_005388731 MODEL 8856998 pseudo LOC102015585 pre-mRNA-splicing factor 38A pseudogene NW_004955402 63168495 63172523 + 102015585 AGCD01001661 MODEL 8836200 protein-coding Depdc1 DEP domain containing 1 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hirschsprung's disease (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955423 23137841 23157548 + 102011214 AGCD01023994;GBDF01159170;XM_005385261;XM_005385263;XM_005385265;XM_005385267;XM_013514542 XP_005385318;XP_005385320;XP_005385322;XP_005385324;XP_013369996 MODEL 8703278 protein-coding LOC102020472 olfactory receptor 5W2-like NW_004955511 5001133 5002068 + 102020472 AGCD01066542;XM_005408082 XP_005408139 MODEL 8954281 ncrna LOC102005805 uncharacterized LOC102005805 NW_004955417 31526897 31527811 + 102005805 AGCD01018654;GBDI01226891;XR_260525 MODEL 8882072 protein-coding Grtp1 growth hormone regulated TBC protein 1 NW_004955404 532866 555366 + 102013684 AGCD01003203;GBCB01109383;GBCE01117673;XM_005374221 XP_005374278 MODEL 39133983 misc_rna 7SK 7SK RNA 8927693 pseudo LOC102021245 rab proteins geranylgeranyltransferase component A 2-like NW_004955419 5165693 5166738 - 102021245 AGCD01019787 MODEL 39131950 rrna 5S_rRNA 5S ribosomal RNA 8871029 protein-coding Fgd4 FYVE, RhoGEF and PH domain containing 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); INVOLVED IN lamellipodium assembly (ortholog); microspike assembly (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); Charcot-Marie-Tooth disease type 4H (ortholog); FOUND IN filopodium (ortholog); lamellipodium (ortholog) NW_004955505 3108131 3314040 - 102009403 AGCD01065015;AGCD01065016;AGCD01065017;AGCD01065018;AGCD01065019;AGCD01065020;GBBH01177094;GBCE01037509;XM_013505926 XP_013361380 MODEL 8854456 protein-coding Trh thyrotropin releasing hormone ENCODES a protein that exhibits thyrotropin-releasing hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult walking behavior (ortholog); eating behavior (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amnestic disorder (ortholog); Bradycardia (ortholog); FOUND IN extracellular space (ortholog); secretory granule (ortholog) NW_004955429 17487275 17489385 - 102010610 AGCD01028858;GBBH01103008;XM_005387079;XM_013515365 XP_005387136;XP_013370819 MODEL 8713038 protein-coding C2cd4c C2 calcium dependent domain containing 4C FOUND IN cytosol (ortholog) NW_004955495 7236627 7243099 + 102025260 AGCD01062125;GBDF01192259;XM_005406041 XP_005406098 MODEL 9021221 protein-coding LOC102011821 putative olfactory receptor 2B8 NW_004955576 1362244 1363185 + 102011821 AGCD01075374;XM_005413954 XP_005414011 MODEL 39132540 rrna 5S_rRNA 5S ribosomal RNA 8979899 protein-coding CUNH8orf88 chromosome unknown C8orf88 homolog NW_004955417 7738254 7758867 - 102012962 AGCD01018014;GBDF01002053;XM_005381767;XM_013512853 XP_005381824;XP_013368307 MODEL 8918878 ncrna LOC102008684 uncharacterized LOC102008684 NW_004955403 54070872 54077075 - 102008684 AGCD01003087;GBDJ01213136;XR_001234164;XR_001234165;XR_001234166;XR_001234167;XR_001234168;XR_001234169;XR_001234171;XR_001234172;XR_001234173 MODEL 8780315 protein-coding Evc2 EvC ciliary complex subunit 2 INVOLVED IN smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); Beemer-Langer syndrome (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); nucleus (ortholog) NW_004955514 4332624 4430844 + 102023182 AGCD01067131;AGCD01067132;AGCD01067133;GBDK01357154;XM_005408823;XM_005408825;XM_005408826;XM_005408827;XM_013506842;XM_013506843;XM_013506844 XP_005408880;XP_005408882;XP_005408883;XP_005408884;XP_013362296;XP_013362297;XP_013362298 MODEL 8832505 protein-coding LOC102019458 disintegrin and metalloproteinase domain-containing protein 21-like NW_004955403 32154362 32157844 - 102019458 AGCD01002431;GBDK01304845;XM_005373526 XP_005373583 MODEL 8702289 protein-coding Elk3 ETS transcription factor ELK3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Neoplasms (ortholog); congenital chylothorax (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955405 32526911 32559580 + 102009344 AGCD01005334;GBDJ01136162;XM_005374495;XM_013518514;XM_013518521;XR_259422 XP_005374552;XP_013373968;XP_013373975 MODEL 39131776 rrna 5S_rRNA 5S ribosomal RNA 8717200 protein-coding LOC102009434 zinc finger protein 709-like NW_004955569 187430 209724 + 102009434 AGCD01074566;GBDF01011185;XM_013509367 XP_013364821 MODEL 8959493 protein-coding LOC102021258 uncharacterized LOC102021258 NW_004955498 3334724 3388529 - 102021258 AGCD01062897;AGCD01062898;AGCD01062899;AGCD01062900;XM_005406477 XP_005406534 MODEL 8928626 ncrna LOC102009084 uncharacterized LOC102009084 NW_004955427 14231272 14244398 + 102009084 AGCD01027268;GBBH01218259;XR_261275 MODEL 8922155 pseudo LOC102005812 G kinase-anchoring protein 1 pseudogene NW_004955488 1169951 1171056 + 102005812 AGCD01059491 MODEL 8862552 protein-coding LOC102020821 collagen alpha-5(VI) chain NW_004955501 7816642 7925709 - 102020821 AGCD01064223;AGCD01064224;AGCD01064225;GBDF01147948;XM_013505730 XP_013361184 MODEL 8769456 protein-coding Acsl5 acyl-CoA synthetase long chain family member 5 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Diarrhea 13 (ortholog); Experimental Arthritis (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955431 17477113 17524539 + 102028782 AGCD01030408;GBDF01124690;XM_005387762;XM_005387763;XM_005387764 XP_005387819;XP_005387820;XP_005387821 MODEL 8819607 protein-coding Ctsh cathepsin H ENCODES a protein that exhibits aminopeptidase activity (ortholog); cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); bradykinin catabolic process (ortholog); cellular response to thyroid hormone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Contusions (ortholog); FOUND IN acrosomal vesicle (ortholog); alveolar lamellar body (ortholog); axoneme (ortholog) NW_004955533 39237 54881 - 102012024 AGCD01070311;GBDK01013472;XM_005410376;XM_013507687 XP_005410433;XP_013363141 MODEL 8710157 protein-coding Crk CRK proto-oncogene, adaptor protein ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); enzyme binding (ortholog); insulin-like growth factor receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH degenerative disc disease (ortholog); Myocardial Ischemia (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955481 1705595 1748363 + 102022192 AGCD01056843;AGCD01056844;AGCD01056845;AGCD01056846;AGCD01056847;GBDI01185611;XM_005402628;XM_005402629;XM_005402630 XP_005402685;XP_005402686;XP_005402687 MODEL 8908232 protein-coding Ap1b1 adaptor related protein complex 1 subunit beta 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Ichthyosiform Erythroderma, Corneal Involvement, Deafness (ortholog); Kartagener syndrome (ortholog); FOUND IN Golgi apparatus (ortholog); synaptic vesicle (ortholog) NW_004955455 3632053 3686007 - 102005560 AGCD01045642;AGCD01045643;GBCQ01034259;XM_005396205;XM_005396206;XM_005396207;XM_005396208;XM_013520456 XP_005396262;XP_005396263;XP_005396264;XP_005396265;XP_013375910 MODEL 8903011 pseudo LOC102016687 60S ribosomal protein L9 pseudogene NW_004955466 3594591 3595212 + 102016687 AGCD01050796 MODEL 10130735 pseudo LOC102015962 Ig heavy chain V-III region 23-like NW_004955487 127682 130180 - 102015962 AGCD01059207;AGCD01059208 MODEL 8755491 protein-coding Fgd5 FYVE, RhoGEF and PH domain containing 5 ASSOCIATED WITH Breast Neoplasms (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955429 17297123 17367365 + 102008443 AGCD01028850;AGCD01028851;AGCD01028852;AGCD01028853;GBDK01396571;XM_013515358 XP_013370812 MODEL 9020990 protein-coding Ikzf2 IKAROS family zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cochlear outer hair cell electromotile response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); COVID-19 (ortholog); FOUND IN nucleus (ortholog) NW_004955457 2608892 2763036 + 102023666 AGCD01046748;AGCD01046749;GBBH01017109;XM_005396928;XM_005396929;XM_005396930;XM_005396932;XM_013520762;XM_013520763;XM_013520764;XM_013520765;XM_013520766;XM_013520767;XM_013520768;XM_013520769;XM_013520770 XP_005396985;XP_005396986;XP_005396987;XP_005396989;XP_013376216;XP_013376217;XP_013376218;XP_013376219;XP_013376220;XP_013376221;XP_013376222;XP_013376223;XP_013376224 MODEL 8768876 pseudo LOC102003982 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 pseudogene NW_004955423 23273272 23274390 + 102003982 AGCD01023999 MODEL 9022016 ncrna LOC102011824 uncharacterized LOC102011824 NW_004955402 7083653 7093047 - 102011824 AGCD01000165;GBDF01118415;XR_259035 MODEL 8735671 protein-coding Trhde thyrotropin releasing hormone degrading enzyme ASSOCIATED WITH long QT syndrome (ortholog) NW_004955405 12229448 12624753 + 102006536 AGCD01004850;AGCD01004851;AGCD01004852;AGCD01004853;AGCD01004854;AGCD01004855;AGCD01004856;AGCD01004857;AGCD01004858;AGCD01004859;GBDI01314318;XM_005374325 XP_005374382 MODEL 8719292 protein-coding LOC102013368 disintegrin and metalloproteinase domain-containing protein 20-like NW_004955656 248 2205 - 102013368 AGCD01077844;GBDF01010724;GBDF01010725;XM_005415057 XP_005415114 MODEL 10362905 ncrna LOC106150023 uncharacterized LOC106150023 NW_004955461 12937023 12973608 + 106150023 AGCD01049027;GBCE01106320;XR_001236547 MODEL 8995857 protein-coding Evi2a ecotropic viral integration site 2A FOUND IN plasma membrane (ortholog) NW_004955481 6346024 6350216 - 102016709 AGCD01057024;GBDF01307664;XM_005402795;XM_013503425 XP_005402852;XP_013358879 MODEL 8916639 ncrna LOC102014085 uncharacterized LOC102014085 NW_004955438 12937928 12940523 - 102014085 AGCD01035276;GBDK01228462;XR_001235126;XR_261930 MODEL 8708635 pseudo LOC102017857 40S ribosomal protein S15a pseudogene NW_004955412 16023672 16024171 - 102017857 AGCD01012891;XM_005378627 MODEL 8893325 protein-coding Iah1 isoamyl acetate hydrolyzing esterase 1 (putative) ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN gene expression (ortholog) NW_004955487 5172505 5180132 + 102024013 AGCD01059322;GBDJ01007583;XM_005404396 XP_005404453 MODEL 8747659 protein-coding LOC102012966 olfactory receptor 13G1 NW_004955418 30326157 30327080 - 102012966 AGCD01019513;XM_005382372 XP_005382429 MODEL 8751904 protein-coding Kdm4d lysine demethylase 4D ENCODES a protein that exhibits chromatin DNA binding (ortholog); damaged DNA binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH nephroblastoma (ortholog); FOUND IN nucleus (ortholog); pericentric heterochromatin (ortholog); site of double-strand break (ortholog) NW_004955605 7585 32650 - 102023767 AGCD01076929;GBDF01045317;XM_005414887;XM_013510099;XR_001232568 XP_005414944;XP_013365553 MODEL 9054152 protein-coding Depdc1b DEP domain containing 1B INVOLVED IN cell migration (ortholog); positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog) NW_004955446 7792778 7857218 + 102005980 AGCD01040130;AGCD01040131;AGCD01040132;GBDF01121403;XM_005392659;XM_005392660 XP_005392716;XP_005392717 MODEL 8732142 protein-coding Cldn34 claudin 34 NW_004955544 3190014 3190573 + 102009880 AGCD01071750;XM_013508184 XP_013363638 MODEL 39134253 misc_rna 7SK 7SK RNA 8818133 protein-coding Kdm1b lysine demethylase 1B ENCODES a protein that exhibits FAD binding (ortholog); FAD-dependent H3K4me/H3K4me3 demethylase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN epigenetic programing of female pronucleus (ortholog); genomic imprinting (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH atrial fibrillation (ortholog); retinoblastoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955483 8000862 8052486 - 102018602 AGCD01057823;GBCE01175840;GBDF01004261;XM_005403391 XP_005403448 MODEL 39131952 rrna 5S_rRNA 5S ribosomal RNA 39131638 rrna 5S_rRNA 5S ribosomal RNA 8874391 ncrna LOC102005816 uncharacterized LOC102005816 NW_004955423 3544871 3634123 + 102005816 AGCD01023515;AGCD01023516;GBDF01047727;XR_260951 MODEL 9042789 protein-coding Inpp5a inositol polyphosphate-5-phosphatase A ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); inositol-polyphosphate 5-phosphatase activity (ortholog); INVOLVED IN inositol phosphate metabolic process (ortholog); negative regulation of calcium-mediated signaling (ortholog); negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); schizophrenia (ortholog); skin disease (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955477 10148032 10384361 + 102026635 AGCD01055691;AGCD01055692;AGCD01055693;AGCD01055694;GBDF01085133;GBDK01129426;XM_005402047 XP_005402104 MODEL 8879707 protein-coding Dmac2 distal membrane arm assembly component 2 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrion (ortholog) NW_004955555 362287 370276 - 102018992 AGCD01073024;AGCD01073025;GBDJ01091232;XM_005412352;XM_013508782 XP_005412409;XP_013364236 MODEL 8834690 protein-coding LOC102014861 cation-dependent mannose-6-phosphate receptor-like NW_004955405 34512513 34518242 + 102014861 AGCD01005375;GBDF01177414;XM_005374507;XM_013519604;XM_013519610;XM_013519615;XR_259431 XP_005374564;XP_013375058;XP_013375064;XP_013375069 MODEL 8724046 pseudo LOC102016688 60S ribosomal protein L17 pseudogene NW_004955467 10296133 10298358 - 102016688 AGCD01051558 MODEL 8984798 protein-coding LOC102016346 cytochrome c oxidase protein 20 homolog INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); mitochondrial complex IV deficiency nuclear type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955406 7994226 8002639 + 102016346 AGCD01005786;AGCD01005787;GBBH01033142;GBDF01003564;XM_013520397 XP_013375851 MODEL 8752602 protein-coding LOC102019464 uncharacterized LOC102019464 NW_004955405 40216488 40222185 + 102019464 AGCD01005508;GBDF01072121;XM_005374613;XM_013519025 XP_005374670;XP_013374479 MODEL 8750718 ncrna LOC102020473 uncharacterized LOC102020473 NW_004955430 7650285 7652006 - 102020473 AGCD01029362;GBDF01224068;XR_261418;XR_261419 MODEL 8865535 protein-coding LOC102007955 olfactory receptor 2H1-like NW_004955583 61165 64037 + 102007955 AGCD01075793;GBDK01227600;XM_005414286 XP_005414343 MODEL 39131777 rrna 5S_rRNA 5S ribosomal RNA 8759777 protein-coding Dusp15 dual specificity phosphatase 15 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog) NW_004955422 29109901 29119829 + 102013427 AGCD01023379;GBDF01007156;XM_005384884 XP_005384941 MODEL 9002451 pseudo LOC102015963 U6 snRNA-associated Sm-like protein LSm8 pseudogene NW_004955422 11656699 11657139 + 102015963 AGCD01022765 MODEL 8994391 pseudo LOC102021259 60S ribosomal protein L36 pseudogene NW_004955424 10966934 10977357 + 102021259 AGCD01024536 MODEL 8766281 pseudo LOC102009085 beclin 1-associated autophagy-related key regulator pseudogene NW_004955427 20646973 20652239 + 102009085 AGCD01027412 MODEL 9058529 ncrna LOC102008325 uncharacterized LOC102008325 NW_004955491 2918171 2920095 + 102008325 AGCD01060390;GBDF01117852;XR_264034 MODEL 8977572 ncrna LOC102008691 uncharacterized LOC102008691 NW_004955406 921242 942095 - 102008691 AGCD01005623;GBDF01120365;XR_001236178 MODEL 39132548 rrna 5S_rRNA 5S ribosomal RNA 8719364 ncrna LOC102014497 uncharacterized LOC102014497 NW_004955440 5842469 5909890 - 102014497 AGCD01036283;AGCD01036284;AGCD01036285;GBDF01120225;XR_001235242;XR_001235243;XR_001235244;XR_001235245;XR_262007;XR_262008 MODEL 8765714 pseudo LOC102010601 28S ribosomal protein S36, mitochondrial pseudogene NW_004955497 1775669 1783185 - 102010601 AGCD01062473 MODEL 9029950 ncrna LOC102013717 uncharacterized LOC102013717 NW_004955477 5443035 5479970 + 102013717 AGCD01055595;GBDF01054100;XR_001230818;XR_263655;XR_263656 MODEL 10189816 protein-coding CUNH8orf89 chromosome unknown C8orf89 homolog NW_004955444 6918632 6954551 + 106149348 AGCD01038879;AGCD01038880;AGCD01038881;AGCD01038882;AGCD01038883;GBBH01016223;GBDI01028034;XM_013518128;XM_013518129;XM_013518130 XP_013373582;XP_013373583;XP_013373584 MODEL 8848489 protein-coding Dcn decorin ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN kidney development (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell migration (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH asthma (ortholog); breast carcinoma (ortholog); congenital stromal corneal dystrophy (ortholog); FOUND IN collagen type VI trimer (ortholog) NW_004955405 28335493 28371912 - 102019976 AGCD01005235;AGCD01005236;GBCE01001609;XM_005374450;XM_005374451 XP_005374507;XP_005374508 MODEL 9036177 protein-coding LOC102015587 olfactory receptor 2T8-like NW_004955619 202710 203666 - 102015587 AGCD01077348;XM_005415010 XP_005415067 MODEL 8918918 protein-coding Elk4 ETS transcription factor ELK4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955406 41325921 41333503 - 102010336 AGCD01006677;GBCE01022092;GBDF01222223;XM_013522928 XP_013378382 MODEL 8740003 ncrna LOC102011372 uncharacterized LOC102011372 NW_004955445 18244255 18269680 - 102011372 AGCD01039901;GBCQ01003080;XR_001235583;XR_001235584;XR_001235585;XR_001235586;XR_001235587;XR_001235588;XR_001235589;XR_001235590;XR_001235591;XR_001235592 MODEL 8753175 protein-coding Dmac2l distal membrane arm assembly component 2 like FOUND IN mitochondrion (ortholog) NW_004955409 12473891 12485066 - 102024312 AGCD01009549;GBCB01056134;XM_005376828;XM_005376829;XM_013510335 XP_005376885;XP_005376886;XP_013365789 MODEL 8862020 protein-coding Fgd6 FYVE, RhoGEF and PH domain containing 6 ASSOCIATED WITH Kuhnt-Junius degeneration (ortholog); malignant mesothelioma (ortholog) NW_004955405 31700706 31801992 - 102004554 AGCD01005303;AGCD01005304;AGCD01005305;GBDK01361830;XM_005374483;XM_013518446;XR_001235695 XP_005374540;XP_013373900 MODEL 8924514 protein-coding Grwd1 glutamate rich WD repeat containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA replication origin binding (ortholog); histone binding (ortholog); INVOLVED IN DNA replication (ortholog); nucleosome assembly (ortholog); nucleosome disassembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congenital diarrhea (ortholog); congenital diarrhea 14 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955559 2033743 2039493 - 102010741 AGCD01073687;GBDJ01072112;XM_005412954 XP_005413011 MODEL 8833028 ncrna LOC102012206 uncharacterized LOC102012206 NW_004955421 24912739 24916609 - 102012206 AGCD01022223;XR_260826 MODEL 8769055 ncrna LOC102016348 uncharacterized LOC102016348 NW_004955408 5608423 5615545 + 102016348 AGCD01008145;AGCD01008146;GBDI01208582;XR_001232445 MODEL 8975509 ncrna LOC102014092 uncharacterized LOC102014092 NW_004955445 4863812 4869530 + 102014092 AGCD01039433;GBDF01276591;XR_262302 MODEL 9033228 protein-coding Evi2b ecotropic viral integration site 2B INVOLVED IN positive regulation of granulocyte differentiation (ortholog) NW_004955481 6332220 6342374 - 102017236 AGCD01057024;GBDK01241136;XM_005402796 XP_005402853 MODEL 10101754 protein-coding C2cd4d C2 calcium dependent domain containing 4D NW_004955589 582261 583519 + 106147595 AGCD01076176;GBDI01079516;XM_013509939 XP_013365393 MODEL 8792492 protein-coding LOC102017859 C-type lectin domain family 4 member A-like NW_004955413 5371896 5380676 - 102017859 AGCD01013670;GBCE01108550;XM_005378875 XP_005378932 MODEL 8834702 protein-coding Ctsk cathepsin K ENCODES a protein that exhibits collagen binding (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN bone resorption (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); Experimental Arthritis (ortholog); genetic disease (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog); lysosome (ortholog) NW_004955588 149036 158093 - 102015468 AGCD01076093;AGCD01076094;GBDK01394350;XM_005414457 XP_005414514 MODEL 8778406 protein-coding Ap1g1 adaptor related protein complex 1 subunit gamma 1 ENCODES a protein that exhibits collagen binding (ortholog); GTP-dependent protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN endosome to melanosome transport (ortholog); Golgi to lysosome transport (ortholog); positive regulation of natural killer cell degranulation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); USMANI-RIAZUDDIN SYNDROME, AUTOSOMAL DOMINANT (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955484 4430461 4511368 - 102013831 AGCD01058215;AGCD01058216;GBCE01153713;XM_005403516;XM_005403517;XM_013503973;XM_013503974 XP_005403573;XP_005403574;XP_013359427;XP_013359428 MODEL 9012903 protein-coding Crkl CRK like proto-oncogene, adaptor protein ENCODES a protein that exhibits identical protein binding (ortholog); phosphotyrosine residue binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); activation of GTPase activity (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; erythropoietin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); chronic myeloid leukemia (ortholog); colon carcinoma (ortholog); FOUND IN extrinsic component of postsynaptic membrane (ortholog); neuromuscular junction (ortholog); nucleoplasm (ortholog) NW_004955442 19358202 19388552 - 102024958 AGCD01038053;GBCE01154741;XM_005391834 XP_005391891 MODEL 8865248 protein-coding Acsl6 acyl-CoA synthetase long chain family member 6 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); enzyme binding (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955408 3336214 3391117 - 102024427 AGCD01008053;AGCD01008054;AGCD01008055;GBCB01026326;XM_005376085;XM_005376086;XM_005376087;XM_005376089;XM_005376090;XM_005376091;XM_005376093;XM_013508247 XP_005376142;XP_005376143;XP_005376144;XP_005376146;XP_005376147;XP_005376148;XP_005376150;XP_013363701 MODEL 39131639 rrna 5S_rRNA 5S ribosomal RNA 9044597 protein-coding Abcd1 ATP binding cassette subfamily D member 1 ENCODES a protein that exhibits ABC-type fatty-acyl-CoA transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); fatty acid biosynthetic process (ortholog); fatty acid elongation (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Addison's disease (ortholog); adrenoleukodystrophy (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) NW_004955580 459715 475363 + 102016330 AGCD01075607;GBCQ01126666;XM_005414142;XM_013509678 XP_005414199;XP_013365132 MODEL 39131953 rrna 5S_rRNA 5S ribosomal RNA 8811717 protein-coding Kdm2a lysine demethylase 2A ENCODES a protein that exhibits histone H3K36 demethylase activity (ortholog); unmethylated CpG binding (ortholog); zinc ion binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); double-strand break repair via nonhomologous end joining (ortholog); heart looping (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); congestive heart failure (ortholog); Familial Prostate Cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) NW_004955422 18201243 18308163 - 102026015 AGCD01022941;AGCD01022942;AGCD01022943;AGCD01022944;GBDI01113489;GBDI01224165;XM_005384357;XM_005384358 XP_005384414;XP_005384415 MODEL 8925983 protein-coding Katnb1 katanin regulatory subunit B1 ENCODES a protein that exhibits ATPase regulator activity (ortholog); dynein complex binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN microtubule severing (ortholog); negative regulation of microtubule depolymerization (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); lissencephaly 6 (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955433 15345246 15365986 + 102004108 AGCD01031751;AGCD01031752;GBDF01046714;XM_005388406;XM_005388407;XM_005388408 XP_005388463;XP_005388464;XP_005388465 MODEL 8821769 protein-coding LOC102005821 transcription elongation factor A protein-like 3 NW_004955503 8192530 8194504 + 102005821 AGCD01064812;GBDI01313611;XM_005406978 XP_005407035 MODEL 8861263 pseudo LOC102003320 UDP-N-acetylhexosamine pyrophosphorylase-like NW_004955460 10516392 10518340 - 102003320 AGCD01048586 MODEL 8800091 protein-coding LOC102021246 arylacetamide deacetylase-like 4 NW_004955486 922340 931576 + 102021246 AGCD01058906;XM_005403940 XP_005403997 MODEL 8930172 ncrna LOC102016689 uncharacterized LOC102016689 NW_004955413 24552820 24557735 + 102016689 AGCD01014371;GBDK01419334;XR_001232956;XR_260105 MODEL 8795795 ncrna LOC102019466 uncharacterized LOC102019466 NW_004955453 10002932 10006876 - 102019466 AGCD01044781;GBDF01278069;XR_001236152 MODEL 8857165 protein-coding Trhr thyrotropin releasing hormone receptor ENCODES a protein that exhibits identical protein binding (ortholog); thyrotropin-releasing hormone receptor activity (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog); positive regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); congenital nongoitrous hypothyroidism 7 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog) NW_004955417 16529293 16565359 + 102021761 AGCD01018264;AGCD01018265;AGCD01018266;XM_005381876 XP_005381933 MODEL 8823405 protein-coding LOC102015588 phosphatidylcholine transfer protein-like NW_004955451 6877991 6908273 - 102015588 AGCD01043213;AGCD01043214;AGCD01043215;AGCD01043216;AGCD01043217;AGCD01043218;GBBH01077365;XM_005394076;XM_005394077;XM_005394078;XM_005394079 XP_005394133;XP_005394134;XP_005394135;XP_005394136 MODEL 39131778 rrna 5S_rRNA 5S ribosomal RNA 8993566 protein-coding LOC102016351 olfactory receptor 10A4-like NW_004955458 2463382 2464346 - 102016351 AGCD01047233;XM_013520866 XP_013376320 MODEL 8865746 protein-coding Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ENCODES a protein that exhibits protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); benign epilepsy with centrotemporal spikes (ortholog); Developmental and Epileptic Encephalopathy 111 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); GATOR1 complex (ortholog) NW_004955455 5881631 6005514 + 102016020 AGCD01045758;AGCD01045759;AGCD01045760;AGCD01045761;AGCD01045762;AGCD01045763;GBDF01188888;XM_005396337;XM_005396338;XM_013520345;XM_013520346;XM_013520347;XM_013520348;XM_013520349;XM_013520350;XM_013520351;XM_013520352;XM_013520353;XM_013520354;XM_013520355;XM_013520356;XM_013520357 XP_005396394;XP_005396395;XP_013375799;XP_013375800;XP_013375801;XP_013375802;XP_013375803;XP_013375804;XP_013375805;XP_013375806;XP_013375807;XP_013375808;XP_013375809;XP_013375810;XP_013375811 MODEL 8971412 protein-coding Ikzf3 IKAROS family zinc finger 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN B cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955451 14483669 14571108 - 102003825 AGCD01043556;AGCD01043557;AGCD01043558;GBDF01181093;XM_013519415;XM_013519416;XM_013519417;XM_013519418 XP_013374869;XP_013374870;XP_013374871;XP_013374872 MODEL 8962602 protein-coding LOC102009437 uncharacterized LOC102009437 NW_004955447 15549581 15578315 + 102009437 AGCD01041059;AGCD01041060;GBBH01122934;XM_013518483 XP_013373937 MODEL 10320712 ncrna LOC106150024 uncharacterized LOC106150024 NW_004955461 8457281 8506691 - 106150024 AGCD01048928;AGCD01048929;XR_001236548;XR_001236549 MODEL 8775340 protein-coding CUNH9orf152 chromosome unknown C9orf152 homolog NW_004955419 16910030 16917851 + 102017237 AGCD01020135;GBDJ01422372;XM_005382746 XP_005382803 MODEL 8827214 protein-coding LOC102011826 60S ribosomal protein L17 NW_004955402 34568222 34571290 - 102011826 AGCD01000865;GBDF01002140;XM_013510590 XP_013366044 MODEL 8783653 protein-coding Acsm1 acyl-CoA synthetase medium chain family member 1 ENCODES a protein that exhibits benzoate-CoA ligase activity (ortholog); decanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); PARTICIPATES IN butanoate metabolic pathway; fatty acid beta degradation pathway; valproic acid pharmacokinetics pathway; ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955442 4133817 4173932 + 102015458 AGCD01037520;GBDK01191442;XM_005391131;XM_013517947 XP_005391188;XP_013373401 MODEL 9013243 pseudo LOC102007959 fatty acyl-CoA reductase 1-like NW_004955402 53525237 53526901 - 102007959 AGCD01001369 MODEL 8987856 protein-coding LOC102024665 uncharacterized LOC102024665 NW_004955470 9908407 9918428 - 102024665 AGCD01052847;GBCQ01154180;XM_005400776;XM_005400777;XR_001237037;XR_001237038;XR_001237039;XR_263482;XR_263483;XR_263485;XR_263486;XR_263487 XP_005400833;XP_005400834 MODEL 39134254 misc_rna 7SK 7SK RNA 9012033 protein-coding LOC102021261 uncharacterized LOC102021261 NW_004955504 891729 893066 + 102021261 AGCD01064831;GBDF01150503;XM_013505867 XP_013361321 MODEL 8886566 protein-coding Dusp16 dual specificity phosphatase 16 ENCODES a protein that exhibits JUN kinase binding (ortholog); mitogen-activated protein kinase binding (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 9404259 9481061 - 102016904 AGCD01013903;AGCD01013904;AGCD01013905;AGCD01013906;GBDF01088602;XM_013511422;XM_013511423;XM_013511424;XM_013511425 XP_013366876;XP_013366877;XP_013366878;XP_013366879 MODEL 8792736 protein-coding Ell elongation factor for RNA polymerase II ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN aldosterone signaling pathway; RNA polymerase II transcription elongation pathway; FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) NW_004955524 3054296 3094125 + 102023388 AGCD01068853;AGCD01068854;GBDF01009023;XM_005409573 XP_005409630 MODEL 9001699 protein-coding LOC102015965 chromosome unknown open reading frame, human C16orf82 NW_004955493 5286875 5344419 + 102015965 AGCD01061061;AGCD01061062;GBDF01008629;XM_013504745 XP_013360199 MODEL 8708046 protein-coding Cldn4 claudin 4 INVOLVED IN circadian rhythm (ortholog); establishment of skin barrier (ortholog); female pregnancy (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); invasive ductal carcinoma (ortholog); malignant mesothelioma (ortholog); FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955456 13961743 13965498 - 102022359 AGCD01046629;GBDJ01020810;XM_005396763 XP_005396820 MODEL 8773277 protein-coding Dmap1 DNA methyltransferase 1 associated protein 1 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of protein import into nucleus (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH epilepsy (ortholog); Muscle Hypotonia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NuA4 histone acetyltransferase complex (ortholog) NW_004955464 13984748 13993411 - 102018699 AGCD01050298;GBCQ01093703;XM_005398766 XP_005398823 MODEL 9006201 ncrna LOC102009086 uncharacterized LOC102009086 NW_004955428 14583845 14601030 - 102009086 AGCD01027989;AGCD01027990;GBCB01109528;XR_261303 MODEL 8716118 protein-coding LOC102008692 olfactory receptor 5P3-like NW_004955453 4970345 4985354 - 102008692 AGCD01044701;XM_013519758 XP_013375212 MODEL 9025864 protein-coding Kdm5a lysine demethylase 5A ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); facultative heterochromatin formation (ortholog); male gonad development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); ankylosing spondylitis (ortholog); breast cancer (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955454 6774308 6865047 + 102016233 AGCD01045268;AGCD01045269;AGCD01045270;AGCD01045271;GBDF01221368;XM_005396019;XM_005396020;XM_013520162;XM_013520163;XM_013520164 XP_005396076;XP_005396077;XP_013375616;XP_013375617;XP_013375618 MODEL 8771442 pseudo LOC102015595 probable dimethyladenosine transferase pseudogene NW_004955404 2498803 2503708 + 102015595 AGCD01003259 MODEL 8742225 protein-coding Inpp5b inositol polyphosphate-5-phosphatase B ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); in utero embryonic development (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH Dent disease 2 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955452 15628852 15682514 - 102015597 AGCD01044491;AGCD01044492;AGCD01044493;GBBH01016131;XM_005395221;XM_005395223;XM_013519687 XP_005395278;XP_005395280;XP_013375141 MODEL 9002419 protein-coding LOC102013723 zinc finger protein 883-like NW_004955483 674454 696184 - 102013723 AGCD01057627;GBCE01056094;XM_005403286;XM_005403289;XM_013503767;XM_013503768;XM_013503769;XM_013503770 XP_005403343;XP_005403346;XP_013359221;XP_013359222;XP_013359223;XP_013359224 MODEL 8928052 pseudo LOC102014862 keratinocyte-associated protein 2-like NW_004955452 3612993 3613460 + 102014862 AGCD01043931 MODEL 8723613 protein-coding C2cd5 C2 calcium dependent domain containing 5 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); intracellular protein transmembrane transport (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); FOUND IN cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955413 17883411 17972865 - 102022582 AGCD01014165;AGCD01014166;GBDJ01129965;GBDJ01129976;XM_005379074 XP_005379131 MODEL 8807373 protein-coding Crlf1 cytokine receptor like factor 1 ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); cytokine binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); cytokine-mediated signaling pathway (ortholog); negative regulation of motor neuron apoptotic process (ortholog); ASSOCIATED WITH cold-induced sweating syndrome (ortholog); cold-induced sweating syndrome 1 (ortholog); cone-rod dystrophy 12 (ortholog); FOUND IN CRLF-CLCF1 complex (ortholog); extracellular space (ortholog) NW_004955524 2998258 3003553 + 102008882 AGCD01068848;GBDI01221965;GBDI01221966;XM_013507286 XP_013362740 MODEL 39131640 rrna 5S_rRNA 5S ribosomal RNA 9015159 protein-coding LOC102011373 zinc finger protein 664-like NW_004955569 341373 356350 + 102011373 AGCD01074574;AGCD01074575;XM_005413508 XP_005413565 MODEL 8975640 protein-coding LOC102020826 olfactory receptor 5W2-like NW_004955511 5010843 5011778 + 102020826 AGCD01066542;XM_005408083 XP_005408140 MODEL 8972168 pseudo LOC102003321 zinc finger protein 64 homolog NW_004955409 16616488 16619136 + 102003321 AGCD01009731 MODEL 9056474 protein-coding Kdm2b lysine demethylase 2B ENCODES a protein that exhibits histone H3K36 demethylase activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); unmethylated CpG binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); embryonic camera-type eye morphogenesis (ortholog); forebrain development (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PcG protein complex (ortholog) NW_004955482 6774021 6885113 + 102013610 AGCD01057416;AGCD01057417;AGCD01057418;AGCD01057419;AGCD01057420;AGCD01057421;AGCD01057422;AGCD01057423;GBBH01117985;XM_005403116;XM_005403117;XM_005403118;XM_005403119;XM_005403120;XM_005403121;XM_005403122;XM_005403124;XM_005403125;XM_005403126;XM_005403127;XM_005403128;XM_005403129;XM_013503691;XM_013503692 XP_005403173;XP_005403174;XP_005403175;XP_005403176;XP_005403177;XP_005403178;XP_005403179;XP_005403181;XP_005403182;XP_005403183;XP_005403184;XP_005403185;XP_005403186;XP_013359145;XP_013359146 MODEL 9053486 protein-coding LOC102012969 uncharacterized LOC102012969 NW_004955486 114376 172776 - 102012969 AGCD01058804;AGCD01058805;AGCD01058806;AGCD01058807;AGCD01058808;AGCD01058809;AGCD01058810;AGCD01058811;AGCD01058812;AGCD01058813;AGCD01058814;AGCD01058815;AGCD01058816;GBDF01153096;XM_013504134 XP_013359588 MODEL 8968218 ncrna LOC102012211 uncharacterized LOC102012211 NW_004955422 23635752 23644682 - 102012211 AGCD01023199;GBCQ01013438;XR_260906 MODEL 8726040 ncrna LOC102008328 uncharacterized LOC102008328 NW_004955423 11498337 11509824 - 102008328 AGCD01023701;GBDF01306799;XR_260965;XR_260966 MODEL 9031739 protein-coding Grxcr1 glutaredoxin and cysteine rich domain containing 1 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transmembrane transport (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 25 (ortholog); Deafness (ortholog); FOUND IN kinocilium (ortholog); stereocilium (ortholog) NW_004955443 4799056 4908749 - 102007375 AGCD01038222;AGCD01038223;AGCD01038224;AGCD01038225;GBDF01078342;XM_005391916 XP_005391973 MODEL 8773625 ncrna LOC102019468 uncharacterized LOC102019468 NW_004955455 8871582 8873817 - 102019468 AGCD01045910;GBDF01190667;XR_262845;XR_262846 MODEL 8999499 ncrna LOC102011827 uncharacterized LOC102011827 NW_004955592 446843 448929 - 102011827 AGCD01076315;GBCC01022945;XR_265138 MODEL 8947027 pseudo LOC102014498 tubulin alpha-8 chain pseudogene NW_004955440 14888081 14894220 - 102014498 AGCD01036482 MODEL 39132549 rrna 5S_rRNA 5S ribosomal RNA 8822073 pseudo LOC102017862 olfactory receptor 502-like NW_004955414 23701731 23702443 - 102017862 AGCD01015518 MODEL 8845469 pseudo LOC102010608 RWD domain-containing protein 1 pseudogene NW_004955429 4973092 4973820 - 102010608 AGCD01028499 MODEL 8942682 protein-coding Evi5 ecotropic viral integration site 5 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN cytosol (ortholog) NW_004955423 1784255 1997561 + 102021566 AGCD01023455;AGCD01023456;AGCD01023457;AGCD01023458;AGCD01023459;AGCD01023460;AGCD01023461;GBDI01158274;XM_005385043;XM_005385044;XM_013514416;XM_013514417;XM_013514418;XM_013514419;XM_013514420;XM_013514421;XM_013514422 XP_005385100;XP_005385101;XP_013369870;XP_013369871;XP_013369872;XP_013369873;XP_013369874;XP_013369875;XP_013369876 MODEL 8986910 pseudo LOC102009848 transcription elongation factor B polypeptide 1 pseudogene NW_004955489 234222 234732 + 102009848 AGCD01059787 MODEL 8945752 protein-coding Ctso cathepsin O NW_004955471 11201934 11225493 + 102013076 AGCD01053249;AGCD01053250;AGCD01053251;GBDK01128336;XM_005400946;XM_005400947;XM_013522905 XP_005401003;XP_005401004;XP_013378359 MODEL 39133984 misc_rna 7SK 7SK RNA 8747119 ncrna LOC102019813 uncharacterized LOC102019813 NW_004955420 18957081 18961026 + 102019813 AGCD01021053;GBDF01176261;XR_260721;XR_260722 MODEL 8937439 protein-coding Cldn5 claudin 5 INVOLVED IN cell-cell junction assembly (ortholog); establishment of blood-retinal barrier (ortholog); establishment of endothelial barrier (ortholog); ASSOCIATED WITH genetic disease (ortholog); Intestinal Reperfusion Injury (ortholog); malignant mesothelioma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955442 18509501 18511267 + 102007600 AGCD01038009;GBDK01015754;XM_005391775 XP_005391832 MODEL 8765869 protein-coding Ap1g2 adaptor related protein complex 1 subunit gamma 2 FOUND IN Golgi-associated vesicle (ortholog); membrane (ortholog); synapse (ortholog) NW_004955409 36795351 36803605 + 102017429 AGCD01010481;GBDJ01312856;XM_005377065;XM_005377066 XP_005377122;XP_005377123 MODEL 8802022 pseudo LOC102005826 cyclin-dependent kinase 11B pseudogene NW_004955511 3584330 3587487 - 102005826 AGCD01066468 MODEL 8911030 protein-coding Ikzf4 IKAROS family zinc finger 4 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH alopecia areata (ortholog); encephalomyelitis (ortholog); vitiligo (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) NW_004955458 3589865 3627154 + 102028270 AGCD01047325;AGCD01047326;AGCD01047327;AGCD01047328;GBBH01094526;GBDF01304051;XM_013520979;XM_013520980;XM_013520981;XM_013520982;XM_013520983;XM_013520984;XM_013520985 XP_013376433;XP_013376434;XP_013376435;XP_013376436;XP_013376437;XP_013376438;XP_013376439 MODEL 9032463 protein-coding Iapp islet amyloid polypeptide ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); lipid binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); amylin receptor 2 signaling pathway (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); gastric ulcer (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN extracellular space (ortholog); inclusion body (ortholog); neuronal cell body (ortholog) NW_004955413 16834940 16841071 - 102016040 AGCD01014117;XM_013511653 XP_013367107 MODEL 8721022 pseudo LOC102009438 nucleobindin-2 pseudogene NW_004955580 212934 215509 + 102009438 AGCD01075591 MODEL 8886179 protein-coding LOC102003326 histone H2A type 1-J-like NW_004955465 13124247 13124484 + 102003326 AGCD01050588;XM_005399005 XP_005399062 MODEL 8762241 ncrna LOC102015969 uncharacterized LOC102015969 NW_004955497 3508336 3515107 + 102015969 AGCD01062543;GBDF01193122;XR_001231430;XR_264200 MODEL 8921963 protein-coding Grxcr2 glutaredoxin and cysteine rich domain containing 2 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); inner ear receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 101 (ortholog); Hearing Loss (ortholog); FOUND IN microvillus (ortholog); stereocilium base (ortholog); stereocilium shaft (ortholog) NW_004955415 8203968 8220148 + 102019798 AGCD01016067;GBDF01042113;XM_005380686 XP_005380743 MODEL 8744562 protein-coding Dusp18 dual specificity phosphatase 18 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of bone resorption (ortholog); peptidyl-threonine dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 4899090 4906785 - 102027487 AGCD01045704;AGCD01045705;GBBH01110550;XM_005396282;XM_005396283;XM_013520328 XP_005396339;XP_005396340;XP_013375782 MODEL 10099434 protein-coding Dmbt1 deleted in malignant brain tumors 1 ENCODES a protein that exhibits DNA binding (ortholog); heparan sulfate binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); blastocyst development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); glioblastoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955477 863388 899703 + 106146406 AGCD01055495;AGCD01055496;GBCQ01031749;XM_013503090;XM_013503091;XM_013503092;XM_013503093;XM_013503094 XP_013358544;XP_013358545;XP_013358546;XP_013358547;XP_013358548 MODEL 39131956 rrna 5S_rRNA 5S ribosomal RNA 9025974 protein-coding Septin4 septin 4 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); flagellated sperm motility (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Lewy body dementia (ortholog); Parkinson's disease (ortholog); Spermatogenic Failure 99 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasm (ortholog) NW_004955451 4505318 4530387 + 102022448 AGCD01043128;GBDF01047745;XM_005394007;XM_005394008;XM_005394009;XM_005394010;XM_005394011;XM_005394014 XP_005394064;XP_005394065;XP_005394066;XP_005394067;XP_005394068;XP_005394071 MODEL 8941886 protein-coding Depdc7 DEP domain containing 7 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955422 13167191 13189080 - 102023485 AGCD01022811;AGCD01022812;AGCD01022813;GBCQ01008642;XM_005384163 XP_005384220 MODEL 8923059 protein-coding Katnbl1 katanin regulatory subunit B1 like 1 INVOLVED IN cytoplasmic microtubule organization (ortholog); positive regulation of cytoskeleton organization (ortholog); FOUND IN mitotic spindle (ortholog); mitotic spindle pole (ortholog); nucleolus (ortholog) NW_004955416 391335 432806 + 102020561 AGCD01016799;AGCD01016800;AGCD01016801;GBDF01121015;XM_005381160;XM_013512507;XM_013512508 XP_005381217;XP_013367961;XP_013367962 MODEL 9050553 pseudo LOC102014865 cyclin-G1 pseudogene NW_004955454 134924 136162 + 102014865 AGCD01044936 MODEL 8894771 ncrna LOC102016694 uncharacterized LOC102016694 NW_004955470 6578994 6581002 + 102016694 AGCD01052773;GBCQ01031785;XR_263473 MODEL 10231865 protein-coding LOC106150025 translation initiation factor IF-2-like NW_004955461 8035952 8076473 + 106150025 AGCD01048925;GBCB01018848;XM_013521304 XP_013376758 MODEL 39131641 rrna 5S_rRNA 5S ribosomal RNA 8930334 protein-coding Fgf1 fibroblast growth factor 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); branch elongation involved in ureteric bud branching (ortholog); cellular response to heat (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); cleft lip (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955415 11151330 11245554 + 102024452 AGCD01016150;AGCD01016151;AGCD01016152;AGCD01016153;AGCD01016154;GBBH01223382;XM_005380699;XM_005380701;XM_005380702;XM_005380703;XM_005380707;XM_013512345;XM_013512346;XM_013512347;XM_013512348 XP_005380756;XP_005380758;XP_005380759;XP_005380760;XP_005380764;XP_013367799;XP_013367800;XP_013367801;XP_013367802 MODEL 8877944 protein-coding Triap1 TP53 regulated inhibitor of apoptosis 1 ENCODES a protein that exhibits p53 binding (ortholog); phosphatidic acid transfer activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955455 11195399 11198402 + 102011402 AGCD01045986;GBCQ01036220;XM_005396508 XP_005396565 MODEL 8766832 ncrna LOC102006834 uncharacterized LOC102006834 NW_004955445 2237508 2240322 - 102006834 AGCD01039351;GBDF01077375;XR_262296 MODEL 8938102 pseudo LOC102007960 ubiquitin-conjugating enzyme E2 L3 pseudogene NW_004955403 1242593 1242983 + 102007960 AGCD01001717 MODEL 39131779 rrna 5S_rRNA 5S ribosomal RNA 8751911 ncrna LOC102023993 uncharacterized LOC102023993 NW_004955412 31694982 31714129 + 102023993 AGCD01013343;GBDF01157393;XR_001232858;XR_001232859;XR_260033 MODEL 8810925 protein-coding Crlf2 cytokine receptor like factor 2 ENCODES a protein that exhibits coreceptor activity (ortholog); cytokine activity (ortholog); cytokine receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); inflammatory response (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autistic disorder (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955499 940250 955458 - 102023717 AGCD01063298;AGCD01063299;AGCD01063300;AGCD01063301;GBBH01172241;GBDK01276583;XM_013505605 XP_013361059 MODEL 39134255 misc_rna 7SK 7SK RNA 8749103 protein-coding Kdm3a lysine demethylase 3A ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9 demethylase activity (ortholog); histone H3K9me/H3K9me2 demethylase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); cellular response to leukemia inhibitory factor (ortholog); formaldehyde biosynthetic process (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); colon cancer (ortholog); Ewing sarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 1164384 1218607 - 102017353 AGCD01024232;AGCD01024233;GBBH01007022;XM_005385394;XM_005385395;XM_013514631;XR_001234175;XR_001234176 XP_005385451;XP_005385452;XP_013370085 MODEL 9018083 ncrna LOC102012970 uncharacterized LOC102012970 NW_004955420 29437923 29445279 + 102012970 AGCD01021502;GBDJ01336190;XR_001233709;XR_001233710 MODEL 8951540 pseudo LOC102015596 60S acidic ribosomal protein P1 pseudogene NW_004955452 7589803 7590997 - 102015596 AGCD01044174;XM_005394950 MODEL 8788246 protein-coding Iars1 isoleucyl-tRNA synthetase 1 ENCODES a protein that exhibits GTPase binding (ortholog); isoleucine-tRNA ligase activity (ortholog); INVOLVED IN isoleucyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); GROWTH RETARDATION, INTELLECTUAL DEVELOPMENTAL DISORDER, HYPOTONIA, AND HEPATOPATHY (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955515 5506064 5558075 + 102030461 AGCD01067359;AGCD01067360;AGCD01067361;GBDF01087321;GBDK01138860;XM_005408918 XP_005408975 MODEL 8891467 pseudo LOC102011828 transcription initiation factor TFIID subunit 13 pseudogene NW_004955402 57682424 57682792 + 102011828 AGCD01001507 MODEL 8707426 pseudo LOC102021248 nucleolar GTP-binding protein 1 pseudogene NW_004955420 8696925 8699253 + 102021248 AGCD01020731 MODEL 8709690 protein-coding Kdm5b lysine demethylase 5B ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); histone H3K4 demethylase activity (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 65 (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) NW_004955406 38755220 38823094 - 102028822 AGCD01006609;AGCD01006610;GBDK01322713;XM_005375227 XP_005375284 MODEL 39131495 protein-coding C2orf69 chromosome 2 open reading frame 69 9064310 protein-coding Ctss cathepsin S ENCODES a protein that exhibits collagen binding (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of peptide antigen (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); late endosome (ortholog) NW_004955413 99279 124793 + 102007752 AGCD01013438;GBDI01062469;XM_005378661;XM_005378662 XP_005378718;XP_005378719 MODEL 8932432 protein-coding Acsm2b acyl-CoA synthetase medium chain family member 2B ENCODES a protein that exhibits benzoate-CoA ligase activity (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; FOUND IN mitochondrion (ortholog) NW_004955442 4083805 4105324 + 102014950 AGCD01037517;AGCD01037518;AGCD01037519;GBCQ01124686;XM_005391129;XM_005391130 XP_005391186;XP_005391187 MODEL 8896472 protein-coding LOC102011379 histone H2B type 1-B-like NW_004955581 88920 89732 + 102011379 AGCD01075657;XM_005414228 XP_005414285 MODEL 8879987 protein-coding Ikzf5 IKAROS family zinc finger 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Thrombocytopenia 7 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955477 1160183 1177597 - 102024795 AGCD01055503;GBDF01002880;XM_005401953;XM_005401954;XM_005401955;XM_013503085;XM_013503086 XP_005402010;XP_005402011;XP_005402012;XP_013358539;XP_013358540 MODEL 8781407 protein-coding Depp1 DEPP autophagy regulator 1 INVOLVED IN regulation of autophagy (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); endometriosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); peroxisome (ortholog) NW_004955546 2291829 2293375 - 102013551 AGCD01072084;GBCB01025706;XM_005411783 XP_005411840 MODEL 8735699 pseudo LOC102008330 guanine nucleotide-binding protein G(k) subunit alpha pseudogene NW_004955497 3650046 3651027 - 102008330 AGCD01062552 MODEL 8810586 pseudo LOC102016356 proteasome activator complex subunit 3 pseudogene NW_004955462 14428091 14429472 - 102016356 AGCD01049446;XM_005398285 MODEL 8953690 protein-coding LOC102012212 putative DBH-like monooxygenase protein 2 NW_004955494 1292620 1301008 + 102012212 AGCD01061393;GBDF01104482;XM_005405397 XP_005405454 MODEL 8968364 ncrna LOC102019469 uncharacterized LOC102019469 NW_004955407 32676882 32682680 - 102019469 AGCD01007680;GBDI01275175;XR_001231132;XR_001231133;XR_001231134 MODEL 8987629 protein-coding Inpp5d inositol polyphosphate-5-phosphatase D ENCODES a protein that exhibits inositol-4,5-bisphosphate 5-phosphatase activity (ortholog); inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol trisphosphate phosphatase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); immunoglobulin mediated immune response (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN erythropoietin signaling pathway; Fc epsilon receptor mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Experimental Liver Cirrhosis (ortholog); Paget's disease of bone (ortholog); FOUND IN actin filament (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955453 2938659 3037211 - 102011272 AGCD01044645;AGCD01044646;AGCD01044647;AGCD01044648;GBDI01180043;XM_005395358;XM_005395359 XP_005395415;XP_005395416 MODEL 39134256 misc_rna 7SK 7SK RNA 9046740 protein-coding Ell2 elongation factor for RNA polymerase II 2 INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); transcription elongation factor complex (ortholog) NW_004955418 16615340 16686632 + 102013295 AGCD01019127;AGCD01019128;GBDF01004410;XM_005382233 XP_005382290 MODEL 9002525 ncrna LOC102019814 uncharacterized LOC102019814 NW_004955486 6994124 7001608 + 102019814 AGCD01059127;GBDF01146141;XR_001231100;XR_001231101;XR_263958 MODEL 9055736 pseudo LOC102015603 prefoldin subunit 6 pseudogene NW_004955407 23888656 23889043 + 102015603 AGCD01007440 MODEL 8740841 pseudo LOC102005827 60S ribosomal protein L6-like NW_004955430 3987198 3988065 - 102005827 AGCD01029239;XR_261416 MODEL 8927810 protein-coding CUNH9orf43 chromosome unknown C9orf43 homolog NW_004955419 14067894 14086931 - 102026747 AGCD01020011;GBDF01002181;XM_013513125;XM_013513126;XM_013513127;XM_013513128;XM_013513129;XM_013513130;XM_013513132 XP_013368579;XP_013368580;XP_013368581;XP_013368582;XP_013368583;XP_013368584;XP_013368586 MODEL 8912896 protein-coding Dusp19 dual specificity phosphatase 19 ENCODES a protein that exhibits JUN kinase phosphatase activity (ortholog); MAP-kinase scaffold activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); INVOLVED IN JNK cascade (ortholog); negative regulation of JNK cascade (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; FOUND IN cytoplasm (ortholog) NW_004955403 14421057 14439829 - 102016010 AGCD01081636;GBDK01039617;XM_005373344 XP_005373401 MODEL 8720602 protein-coding Dmbx1 diencephalon/mesencephalon homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult feeding behavior (ortholog); adult locomotory behavior (ortholog); brain development (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955464 11788526 11811885 - 102019153 AGCD01050161;GBDF01264890;XM_005398674 XP_005398731 MODEL 8889668 protein-coding Cldn6 claudin 6 ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN cell-cell junction organization (ortholog); FOUND IN apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog); plasma membrane (ortholog) NW_004955442 14323193 14326311 + 102008152 AGCD01037810;GBDF01217625;XM_005391379 XP_005391436 MODEL 8933361 ncrna LOC102020831 uncharacterized LOC102020831 NW_004955431 20933956 20943104 + 102020831 AGCD01030485;GBDF01144314;XR_261491 MODEL 8806460 ncrna LOC102009439 uncharacterized LOC102009439 NW_004955448 13394879 13451616 + 102009439 AGCD01041588;AGCD01041589;AGCD01041590;AGCD01041591;GBDK01000836;XR_262470 MODEL 8743187 protein-coding LOC102021265 secreted and transmembrane protein 1A NW_004955506 823508 832146 + 102021265 AGCD01065236;AGCD01065237;GBDI01197125;GBDJ01319535;XM_013506143 XP_013361597 MODEL 39131642 rrna 5S_rRNA 5S ribosomal RNA 9021338 pseudo LOC102014500 serine/threonine-protein kinase tousled-like 2 pseudogene NW_004955441 9222009 9224674 - 102014500 AGCD01037014 MODEL 8795955 protein-coding Fgf10 fibroblast growth factor 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ formation (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); aplasia of lacrimal and salivary glands (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); nucleus (ortholog) NW_004955446 18163117 18244840 + 102029240 AGCD01040396;GBDF01112025;XM_005392731 XP_005392788 MODEL 8959795 ncrna LOC102006838 uncharacterized LOC102006838 NW_004955445 17445275 17465555 - 102006838 AGCD01039888;AGCD01039889;AGCD01039890;GBDF01307023;XR_001235559;XR_001235560;XR_262346 MODEL 8957407 pseudo LOC102017864 selenoprotein K-like NW_004955415 7938080 7938777 - 102017864 AGCD01016059 MODEL 8907471 protein-coding LOC102003327 uncharacterized LOC102003327 NW_004955466 5485952 5548346 + 102003327 AGCD01050881;AGCD01050882;GBDF01043768;XM_005399132;XM_005399133;XM_005399134;XM_005399135;XM_013522017;XM_013522018 XP_005399189;XP_005399190;XP_005399191;XP_005399192;XP_013377471;XP_013377472 MODEL 8733570 pseudo LOC102009854 cytochrome c oxidase assembly factor 5 pseudogene NW_004955424 27866525 27870117 - 102009854 AGCD01025137 MODEL 8706008 protein-coding Gsap gamma-secretase activating protein ENCODES a protein that exhibits amyloid-beta binding (ortholog); INVOLVED IN positive regulation of amyloid-beta formation (ortholog); regulation of proteolysis (ortholog); FOUND IN trans-Golgi network (ortholog) NW_004955410 7740548 7810563 + 102015486 AGCD01010723;GBCE01057270;GBCQ01176435;XM_013510519 XP_013365973 MODEL 9013379 protein-coding LOC102013725 peroxisomal bifunctional enzyme NW_004955420 22306860 22353190 + 102013725 AGCD01021195;AGCD01021196;GBCE01020247;XM_005383302 XP_005383359 MODEL 39133985 misc_rna 7SK 7SK RNA 8995815 pseudo LOC102015972 calcyclin-binding protein pseudogene NW_004955506 6547195 6548094 + 102015972 AGCD01065430 MODEL 8971099 protein-coding Evi5l ecotropic viral integration site 5 like ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); positive regulation of GTPase activity (ortholog) NW_004955563 1384694 1401107 - 102021183 AGCD01074145;AGCD01074146;GBDK01234997;XM_013509169;XM_013509170;XM_013509171;XM_013509172;XM_013509173 XP_013364623;XP_013364624;XP_013364625;XP_013364626;XP_013364627 MODEL 9046410 protein-coding Ap1m1 adaptor related protein complex 1 subunit mu 1 INVOLVED IN endosome to melanosome transport (ortholog); melanosome organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; FOUND IN synapse (ortholog) NW_004955524 1345125 1360869 - 102030117 AGCD01068745;AGCD01068746;AGCD01068747;AGCD01068748;GBCB01023140;GBCE01032136;XM_013507334 XP_013362788 MODEL 8893532 protein-coding Septin5 septin 5 NW_004955442 18361072 18369648 - 102006399 AGCD01038004;GBCE01030386;XM_005391774;XM_013517956;XM_013517957;XM_013517958;XM_013517959;XM_013517960 XP_005391831;XP_013373410;XP_013373411;XP_013373412;XP_013373413;XP_013373414 MODEL 8989543 protein-coding Dmc1 DNA meiotic recombinase 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA strand exchange activity (ortholog); identical protein binding (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); double-strand break repair via homologous recombination (ortholog); gamete generation (ortholog); ASSOCIATED WITH azoospermia (ortholog); CRYPTOZOOSPERMIA (ortholog); primary ovarian insufficiency (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); condensed nuclear chromosome (ortholog) NW_004955413 24685311 24724269 - 102020645 AGCD01014374;AGCD01014375;AGCD01014376;AGCD01014377;AGCD01014378;GBDF01224109;XM_005379261 XP_005379318 MODEL 8764452 pseudo LOC102014870 40S ribosomal protein SA pseudogene NW_004955407 36446277 36447322 + 102014870 AGCD01007768 MODEL 8962085 protein-coding LOC102016696 serum amyloid A-4 protein NW_004955414 32965284 32973563 - 102016696 AGCD01015791;AGCD01015792;GBDI01263382;XM_013511902;XM_013511903 XP_013367356;XP_013367357 MODEL 10193916 ncrna LOC106150026 uncharacterized LOC106150026 NW_004955461 3038169 3047728 + 106150026 AGCD01048845;GBDF01089417;XR_001236553;XR_001236554 MODEL 8732907 protein-coding Katnip katanin interacting protein ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); negative regulation of motile cilium assembly (ortholog); ASSOCIATED WITH ciliopathy (ortholog); Joubert syndrome (ortholog); Joubert syndrome 1 (ortholog); FOUND IN 9+2 motile cilium (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955493 5724550 5915727 + 102008118 AGCD01061075;AGCD01061076;AGCD01061077;AGCD01061078;GBDF01088295;XM_005405142;XM_013504820;XM_013504821;XM_013504822;XM_013504823;XM_013504824;XM_013504825;XM_013504826;XR_001231277 XP_005405199;XP_013360274;XP_013360275;XP_013360276;XP_013360277;XP_013360278;XP_013360279;XP_013360280 MODEL 8936920 pseudo LOC102008707 retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta pseudogene NW_004955411 1587497 1587967 + 102008707 AGCD01011485;XM_005377918 MODEL 10167406 pseudo LOC102007961 Ig heavy chain V-III region 23-like NW_004955643 40217 40730 + 102007961 AGCD01077723 MODEL 39131780 rrna 5S_rRNA 5S ribosomal RNA 8991861 protein-coding Crlf3 cytokine receptor like factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955481 6928549 6955371 - 102021659 AGCD01057043;GBBH01037053;XM_013503469 XP_013358923 MODEL 8920199 protein-coding Acsm3 acyl-CoA synthetase medium chain family member 3 ENCODES a protein that exhibits fatty acid ligase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); propionate CoA-transferase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); hypertension (ortholog); IgA glomerulonephritis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955493 73306 95521 + 102030541 AGCD01060837;AGCD01060838;GBCQ01008878;XM_005405036 XP_005405093 MODEL 8791739 pseudo LOC102008331 cytoplasmic dynein 1 intermediate chain 2 pseudogene NW_004955500 4123771 4125723 + 102008331 AGCD01063770 MODEL 9039029 protein-coding LOC102012215 aldose reductase-related protein 2-like NW_004955494 7960872 8029450 - 102012215 AGCD01061559;AGCD01061560;AGCD01061561;AGCD01061562;AGCD01061563;AGCD01061564;AGCD01061565;AGCD01061566;AGCD01061567;AGCD01061568;AGCD01061569;GBBH01186150;XM_013505016 XP_013360470 MODEL 9016868 protein-coding Kdm3b lysine demethylase 3B PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955418 2026254 2098223 - 102024338 AGCD01018739;AGCD01018740;GBCE01003081;GBDF01125628;XM_005382340;XM_013512959;XM_013512960;XM_013512961;XM_013512962 XP_005382397;XP_013368413;XP_013368414;XP_013368415;XP_013368416 MODEL 8866998 pseudo LOC102005051 nucleosome assembly protein 1-like 1 pseudogene NW_004955491 8228056 8233055 + 102005051 AGCD01060610 MODEL 39134257 misc_rna 7SK 7SK RNA 8884349 protein-coding Iars2 isoleucyl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH cataract (ortholog); CATARACTS, GROWTH HORMONE DEFICIENCY, SENSORY NEUROPATHY, SENSORINEURAL HEARING LOSS, AND SKELETAL DYSPLASIA (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955520 3485816 3521035 - 102024840 AGCD01068103;AGCD01068104;AGCD01068105;GBBH01143287;GBDI01020406;XM_013507032 XP_013362486 MODEL 8769532 protein-coding Inpp5e inositol polyphosphate-5-phosphatase E ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); negative regulation of protein localization to cilium (ortholog); PARTICIPATES IN phosphoinositide metabolic pathway; ASSOCIATED WITH Ciliary Motility Disorders (ortholog); cleft palate (ortholog); clubfoot (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); Golgi membrane (ortholog) NW_004955513 4304483 4313087 + 102006700 AGCD01066925;GBDF01049179;XM_005408490 XP_005408547 MODEL 8796808 protein-coding Ell3 elongation factor for RNA polymerase II 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA-templated transcription elongation (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription elongation factor complex (ortholog) NW_004955416 10223213 10226978 - 102011441 AGCD01017119;GBBH01198088;XM_005381405 XP_005381462 MODEL 9016002 ncrna LOC102005831 uncharacterized LOC102005831 NW_004955514 2457669 2462790 + 102005831 AGCD01067082;GBDF01145712;XR_264496 MODEL 8743583 ncrna LOC102010609 uncharacterized LOC102010609 NW_004955508 2826273 2855521 + 102010609 AGCD01065798;GBBH01228727;XR_001231644 MODEL 8873382 protein-coding Dusp2 dual specificity phosphatase 2 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955470 3735224 3737667 - 102025900 AGCD01052708;AGCD01052709;GBBH01228596;GBDI01186539;XM_013522699 XP_013378153 MODEL 39132552 rrna 5S_rRNA 5S ribosomal RNA 8883480 protein-coding Trib1 tribbles pseudokinase 1 ENCODES a protein that exhibits mitogen-activated protein kinase kinase binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Hypertriglyceridemia (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955461 494003 501928 + 102030050 AGCD01048795;GBDF01159528;XM_005397987 XP_005398044 MODEL 8827582 protein-coding LOC102023994 olfactory receptor 148-like NW_004955412 24836329 24837261 - 102023994 AGCD01013129;XM_005378639 XP_005378696 MODEL 8987695 pseudo LOC102012971 spermine synthase pseudogene NW_004955422 11371620 11373194 + 102012971 AGCD01022755 MODEL 8876664 pseudo LOC102016697 LYR motif-containing protein 2 pseudogene NW_004955414 17235545 17236007 - 102016697 AGCD01015235 MODEL 8962611 protein-coding LOC102009441 zinc finger protein 211 NW_004955584 469784 476250 + 102009441 AGCD01075942;GBDK01431604;XM_005414361;XM_005414362;XM_005414363;XM_005414365 XP_005414418;XP_005414419;XP_005414420;XP_005414422 MODEL 8901918 protein-coding LOC102014873 cytochrome P450 2J2-like NW_004955457 13469363 13520883 - 102014873 AGCD01047044;AGCD01047045;AGCD01047046;AGCD01047047;GBDJ01132286;XM_005397079;XM_013520782 XP_005397136;XP_013376236 MODEL 8893266 ncrna LOC102021250 uncharacterized LOC102021250 NW_004955422 19299181 19314130 - 102021250 AGCD01022997;AGCD01022998;GBDJ01376834;XR_260898 MODEL 8952261 ncrna LOC102017871 uncharacterized LOC102017871 NW_004955416 29852903 29861728 + 102017871 AGCD01017668;GBDF01099351;XR_001233381;XR_260437 MODEL 8981697 protein-coding Fgf11 fibroblast growth factor 11 ASSOCIATED WITH intellectual disability (ortholog) NW_004955467 9482467 9488992 - 102012941 AGCD01051513;GBDI01383783;XM_005399489;XM_013522234 XP_005399546;XP_013377688 MODEL 8845519 protein-coding LOC102006839 zinc finger protein 709-like NW_004955569 1394409 1414793 + 102006839 AGCD01074651;AGCD01074652;AGCD01074653;AGCD01074654;GBDF01150811;XM_005413501 XP_005413558 MODEL 8898480 ncrna LOC102022278 uncharacterized LOC102022278 NW_004955414 29010951 29081914 + 102022278 AGCD01015698;AGCD01015699;XR_260210 MODEL 9052679 protein-coding Kdm5c lysine demethylase 5C ENCODES a protein that exhibits histone H3K4 demethylase activity (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955475 243666 278064 - 102010996 AGCD01054684;GBBH01093550;XM_005401477;XM_005401478;XM_005401479;XM_005401482;XM_005401483;XM_013502866;XM_013502867 XP_005401534;XP_005401535;XP_005401536;XP_005401539;XP_005401540;XP_013358320;XP_013358321 MODEL 8774104 protein-coding Gsc goosecoid homeobox ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); dorsal/ventral neural tube patterning (ortholog); ear development (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Short Stature, Auditory Canal Atresia, Mandibular Hypoplasia, Skeletal Abnormalities (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); transcription regulator complex (ortholog) NW_004955438 17653149 17655091 + 102019434 AGCD01035447;GBDI01295671;XM_005390387 XP_005390444 MODEL 9041152 protein-coding Crls1 cardiolipin synthase 1 ENCODES a protein that exhibits cardiolipin synthase (CMP-forming) activity (ortholog); INVOLVED IN cardiolipin biosynthetic process (ortholog); response to phosphatidylethanolamine (ortholog); response to thyroxine (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency 57 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955415 16389379 16410486 + 102015194 AGCD01016379;GBBH01186168;GBCE01114703;XM_005380845;XM_005380850;XR_001233222 XP_005380902;XP_005380907 MODEL 8898092 protein-coding Atosb atos homolog B FOUND IN nucleus (ortholog) NW_004955472 1066661 1077960 + 102012635 AGCD01053370;AGCD01053371;AGCD01053372;GBDJ01136370;XM_005401017;XM_005401019;XM_005401021;XM_013522969 XP_005401074;XP_005401076;XP_005401078;XP_013378423 MODEL 8962069 ncrna LOC102015974 uncharacterized LOC102015974 NW_004955430 18806239 18827763 + 102015974 AGCD01029701;GBDF01251071;XR_261430 MODEL 8933519 protein-coding Septin6 septin 6 INVOLVED IN cytoskeleton organization (ortholog); FOUND IN axon terminus (ortholog); cleavage furrow (ortholog); presynapse (ortholog) NW_004955534 306691 381799 + 102009315 AGCD01070448;GBBH01006609;XM_005410435;XM_005410437;XM_005410438;XM_013507703;XM_013507704;XM_013507705;XM_013507706 XP_005410492;XP_005410494;XP_005410495;XP_013363157;XP_013363158;XP_013363159;XP_013363160 MODEL 8705394 protein-coding Il10 interleukin 10 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-10 receptor binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); cellular response to antibiotic (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Actinic Cheilitis (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955406 42307789 42312255 - 102022355 AGCD01006700;GBDJ01151912;XM_005375404 XP_005375461 MODEL 8991833 protein-coding LOC102020832 NUT family member 2G-like NW_004955515 3902660 3910566 - 102020832 AGCD01067307;GBDF01224313;XM_013506862 XP_013362316 MODEL 8931552 protein-coding Ctsv cathepsin V ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog) NW_004955422 23722899 23728426 + 102012448 AGCD01023204;AGCD01023205;GBDI01064068;XM_005384704 XP_005384761 MODEL 8925037 pseudo LOC102019473 40S ribosomal protein S2 pseudogene NW_004955407 37229074 37229776 - 102019473 AGCD01007779 MODEL 10287363 ncrna LOC106150027 uncharacterized LOC106150027 NW_004955461 14625185 14628313 - 106150027 AGCD01049057;GBDK01101991;XR_001236556 MODEL 8824938 protein-coding Ak5 adenylate kinase 5 ENCODES a protein that exhibits nucleoside diphosphate kinase activity (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN cytosol (ortholog) NW_004955423 15587233 15796314 - 102020929 AGCD01023811;AGCD01023812;AGCD01023813;GBDF01114509;GBDJ01355615;XM_005385219 XP_005385276 MODEL 9031816 pseudo LOC102016361 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 pseudogene NW_004955465 318026 359135 + 102016361 AGCD01050306;AGCD01050307 MODEL 8854321 protein-coding Cap1 cyclase associated actin cytoskeleton regulatory protein 1 INVOLVED IN actin cytoskeleton organization (ortholog); ameboidal-type cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Neoplasm Metastasis (ortholog); osteoporosis (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955452 17503530 17528049 + 102004448 AGCD01044558;AGCD01044559;GBDF01010423;XM_005395275;XM_005395276;XM_005395277;XM_013519550 XP_005395332;XP_005395333;XP_005395334;XP_013375004 MODEL 8965336 protein-coding LOC102012974 ubiquinol-cytochrome-c reductase complex assembly factor 1 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); FOUND IN cytoplasmic vesicle (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955422 26009078 26096300 + 102012974 AGCD01023273;AGCD01023274;AGCD01023275;GBDF01119443;XM_005384797 XP_005384854 MODEL 8717791 pseudo LOC102008333 thrombospondin type-1 domain-containing protein 1-like NW_004955426 16226528 16227149 - 102008333 AGCD01026464 MODEL 8934830 protein-coding CUNH9orf50 chromosome unknown C9orf50 homolog FOUND IN cytoplasm (ortholog) NW_004955570 1731774 1737757 - 102020729 AGCD01074826;AGCD01074827;GBDF01046864;XM_005413629 XP_005413686 MODEL 8832104 protein-coding Bclaf3 BCLAF1 and THRAP3 family member 3 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); positive regulation of stem cell population maintenance (ortholog); FOUND IN nucleus (ortholog); spliceosomal complex (ortholog) NW_004955509 383083 435163 - 102004624 AGCD01065931;AGCD01065932;GBDK01028165;XM_005407799;XM_005407800;XM_005407801;XM_013506297;XM_013506298;XM_013506299 XP_005407856;XP_005407857;XP_005407858;XP_013361751;XP_013361752;XP_013361753 MODEL 39133986 misc_rna 7SK 7SK RNA 8908392 pseudo LOC102011382 ubiquitin carboxyl-terminal hydrolase 1 pseudogene NW_004955402 52962185 52963700 + 102011382 AGCD01001352 MODEL 8904889 protein-coding Kdm4a lysine demethylase 4A ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K9 demethylase activity (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); negative regulation of astrocyte differentiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); breast cancer (ortholog); Cardiomegaly (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955537 3199394 3255945 + 102003693 AGCD01070950;AGCD01070951;AGCD01070952;AGCD01070953;GBDF01304480;XM_005410671;XM_005410672;XM_005410673;XM_005410674;XM_013507751 XP_005410728;XP_005410729;XP_005410730;XP_005410731;XP_013363205 MODEL 39134258 misc_rna 7SK 7SK RNA 8781168 protein-coding Evl Enah/Vasp-like ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); cellular response to type II interferon (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) NW_004955438 21198761 21298657 + 102004644 AGCD01035530;AGCD01035531;AGCD01035532;GBDK01078332;XM_005390426;XM_005390427;XM_005390428 XP_005390483;XP_005390484;XP_005390485 MODEL 8981586 protein-coding Hint3 histidine triad nucleotide binding protein 3 ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); identical protein binding (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955436 7254572 7265936 + 102004515 AGCD01033704;GBDF01126114;XM_005389161 XP_005389218 MODEL 9044067 pseudo LOC102021266 zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene NW_004955509 31706 32464 + 102021266 AGCD01065925 MODEL 39131643 rrna 5S_rRNA 5S ribosomal RNA 8767652 ncrna LOC102005832 uncharacterized LOC102005832 NW_004955432 9508053 9514240 + 102005832 AGCD01030907;GBDF01055577;XR_261519 MODEL 8978065 protein-coding Dmd dystrophin ENCODES a protein that exhibits actin binding (ortholog); dystroglycan binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process (ortholog); bone development (ortholog); cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); Ataxia (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); cell junction (ortholog) NW_004955535 1283084 3297015 + 102027455 AGCD01070649;AGCD01070650;AGCD01070651;AGCD01070652;AGCD01070653;AGCD01070654;AGCD01070655;AGCD01070656;AGCD01070657;AGCD01070658;AGCD01070659;AGCD01070660;AGCD01070661;AGCD01070662;AGCD01070663;AGCD01070664;AGCD01070665;AGCD01070666;AGCD01070667;AGCD01070668;AGCD01070669;AGCD01070670;AGCD01070671;AGCD01070672;AGCD01070673;AGCD01070674;AGCD01070675;AGCD01070676;AGCD01070677;AGCD01070678;AGCD01070679;AGCD01070680;AGCD01070681;AGCD01070682;AGCD01070683;AGCD01070684;AGCD01070685;AGCD01070686;AGCD01070687;AGCD01070688;AGCD01070689;AGCD01070690;GBCB01005432;XM_005410485;XM_005410486;XM_005410487;XM_005410488;XM_005410489;XM_013507710 XP_005410542;XP_005410543;XP_005410544;XP_005410545;XP_005410546;XP_013363164 MODEL 8734890 protein-coding LOC102006842 arylacetamide deacetylase-like NW_004955448 3066739 3077788 + 102006842 AGCD01041301;GBDJ01144113;XM_005393038 XP_005393095 MODEL 8789675 protein-coding Dusp21 dual specificity phosphatase 21 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) NW_004955516 3369548 3370403 - 102003795 AGCD01067490;GBDF01156584;XM_005408994 XP_005409051 MODEL 39131781 rrna 5S_rRNA 5S ribosomal RNA 8999846 protein-coding LOC102023997 uncharacterized protein C11orf91 homolog NW_004955468 4813513 4814537 + 102023997 AGCD01051922;GBDF01002276;XM_005400067;XM_005400068;XM_005400069;XM_013522385 XP_005400124;XP_005400125;XP_005400126;XP_013377839 MODEL 8870193 protein-coding Il10ra interleukin 10 receptor subunit alpha ENCODES a protein that exhibits interleukin-10 binding (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN interleukin-10-mediated signaling pathway (ortholog); intestinal epithelial structure maintenance (ortholog); negative regulation of autophagy (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Crohn's disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955412 19182536 19197083 + 102004584 AGCD01012950;GBDK01061604;XM_005378226 XP_005378283 MODEL 8741987 pseudo LOC102003333 60S ribosomal protein L27 pseudogene NW_004955413 15155101 15155528 + 102003333 AGCD01014066 MODEL 8754176 ncrna LOC102013726 uncharacterized LOC102013726 NW_004955486 6290723 6294087 - 102013726 AGCD01059117;GBBH01170469;XR_001231137 MODEL 8822550 ncrna LOC102009857 uncharacterized LOC102009857 NW_004955425 20777011 20788476 - 102009857 AGCD01025762;AGCD01025763;GBDJ01354331;XR_261165;XR_261166 MODEL 8732357 ncrna LOC102019816 uncharacterized LOC102019816 NW_004955491 8941349 8946467 - 102019816 AGCD01060621;GBDF01074465;XR_264044 MODEL 9033097 ncrna LOC102012219 uncharacterized LOC102012219 NW_004955495 5440402 5443188 - 102012219 AGCD01062007;GBDF01145786;XR_001231364 MODEL 8912503 pseudo LOC102005056 cullin-4B pseudogene NW_004955422 28787889 28796918 + 102005056 AGCD01023368;AGCD01023369;AGCD01023370 MODEL 8919204 protein-coding Cldn7 claudin 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); COVID-19 (ortholog); Neoplasm Metastasis (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955467 9652093 9654291 + 102023456 AGCD01051520;GBDJ01078868;XM_005399528 XP_005399585 MODEL 9000429 protein-coding Ak6 adenylate kinase 6 ENCODES a protein that exhibits AMP kinase activity (ortholog); FOUND IN Cajal body (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955575 61082 78415 - 102022240 AGCD01075200;AGCD01075201;GBCB01023039;XM_005413912 XP_005413969 MODEL 9008652 protein-coding Ap1m2 adaptor related protein complex 1 subunit mu 2 NW_004955495 1759247 1768479 - 102007671 AGCD01061725;AGCD01061726;GBDI01176729;XM_005405606;XM_013505143 XP_005405663;XP_013360597 MODEL 8725640 pseudo LOC102017874 eukaryotic translation initiation factor 4E type 2 pseudogene NW_004955481 6307199 6311302 - 102017874 AGCD01057023 MODEL 8868705 ncrna LOC102008709 uncharacterized LOC102008709 NW_004955412 20482901 20493630 + 102008709 AGCD01013009;GBDF01240677;XR_001232902;XR_001232903;XR_260004 MODEL 8779170 protein-coding Gata3 GATA binding protein 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); aortic valve morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 24448446 24477885 + 102010495 AGCD01022216;AGCD01022217;GBCE01042494;XM_005383881;XM_005383882;XM_005383883 XP_005383938;XP_005383939;XP_005383940 MODEL 8743752 protein-coding Kazald1 Kazal type serine peptidase inhibitor domain 1 INVOLVED IN extracellular matrix organization (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) NW_004955485 9131081 9133418 - 102018605 AGCD01058746;GBBH01164469;XM_005403935 XP_005403992 MODEL 8811564 protein-coding Crmp1 collapsin response mediator protein 1 ENCODES a protein that exhibits filamin binding (ortholog); identical protein binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); neuron development (ortholog); regulation of postsynapse assembly (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955514 4216575 4273947 + 102022113 AGCD01067129;GBCE01078501;XM_005408820 XP_005408877 MODEL 9064649 protein-coding LOC102015975 olfactory receptor 10AG1-like NW_004955511 5038953 5039909 - 102015975 AGCD01066544;XM_005408281 XP_005408338 MODEL 39134259 misc_rna 7SK 7SK RNA 8863437 ncrna LOC102019478 uncharacterized LOC102019478 NW_004955409 23587939 23595263 - 102019478 AGCD01010068;GBDI01355144;XR_001232654 MODEL 9058565 protein-coding Trib2 tribbles pseudokinase 2 ENCODES a protein that exhibits nucleotide binding (ortholog); protein kinase activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) NW_004955487 6889571 6915068 + 102008735 AGCD01059386;GBCE01170233;XM_005404436;XM_013504382;XM_013504383 XP_005404493;XP_013359836;XP_013359837 MODEL 8759743 pseudo LOC102009446 heat shock cognate 71 kDa protein pseudogene NW_004955402 47210640 47213865 + 102009446 AGCD01001177;XR_259129 MODEL 8920172 protein-coding Dusp22 dual specificity phosphatase 22 ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein tyrosine kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); intracellular signal transduction (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN cytoplasm (ortholog); filamentous actin (ortholog); leading edge of lamellipodium (ortholog) NW_004955465 12551063 12597386 - 102030165 AGCD01050550;GBCB01021922;XM_005398940;XM_013521850 XP_005398997;XP_013377304 MODEL 8901481 protein-coding LOC102012975 keratin-associated protein 5-5-like NW_004955422 13414755 13423735 - 102012975 AGCD01022823;AGCD01022824;AGCD01022825;XM_013513832 XP_013369286 MODEL 8798418 protein-coding Inpp5f inositol polyphosphate-5-phosphatase F ENCODES a protein that exhibits inositol monophosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); clathrin-dependent endocytosis (ortholog); FOUND IN axon (ortholog); clathrin-coated endocytic vesicle (ortholog); clathrin-coated pit (ortholog) NW_004955551 634724 641266 + 102012133 AGCD01072666;GBCQ01070019;XM_005412166 XP_005412223 MODEL 8743958 protein-coding LOC102003334 uncharacterized LOC102003334 NW_004955470 2780581 2789641 + 102003334 AGCD01052682;GBDF01222195;XM_005400615;XM_005400616;XM_005400617;XM_005400618 XP_005400672;XP_005400673;XP_005400674;XP_005400675 MODEL 8845253 ncrna LOC102022281 uncharacterized LOC102022281 NW_004955476 9313471 9320745 + 102022281 AGCD01055382;GBDF01119901;XR_263628;XR_263629 MODEL 9005530 protein-coding LOC102010611 olfactory receptor 1013-like NW_004955511 1796248 1797165 + 102010611 AGCD01066380;XM_005407977 XP_005408034 MODEL 8756856 protein-coding CUNH9orf78 chromosome unknown C9orf78 homolog ENCODES a protein that exhibits U5 snRNA binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); regulation of homologous chromosome segregation (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955513 38060 43450 - 102013111 AGCD01066810;GBDJ01089128;XM_005408332;XM_013506705 XP_005408389;XP_013362159 MODEL 8894233 protein-coding Elmo1 engulfment and cell motility 1 ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based process (ortholog); cell motility (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); esophagus adenocarcinoma (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); guanyl-nucleotide exchange factor complex (ortholog) NW_004955460 6044827 6580770 + 102028385 AGCD01048466;AGCD01048467;AGCD01048468;AGCD01048469;AGCD01048470;AGCD01048471;GBCQ01162510;XM_005397755;XM_013521230;XM_013521231;XM_013521232 XP_005397812;XP_013376684;XP_013376685;XP_013376686 MODEL 8808610 protein-coding Atox1 antioxidant 1 copper chaperone ENCODES a protein that exhibits ATPase binding (ortholog); copper chaperone activity (ortholog); copper ion binding (ortholog); INVOLVED IN copper ion export (ortholog); copper ion transport (ortholog); intracellular copper ion homeostasis (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Chronic Hepatitis (ortholog); Colorectal Neoplasms (ortholog) NW_004955408 6156334 6168423 - 102023557 AGCD01008164;GBDF01002335;XM_005376170 XP_005376227 MODEL 8841398 protein-coding Dusp23 dual specificity phosphatase 23 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955468 11579624 11581975 + 102008210 AGCD01052135;GBCE01025200;XM_005400175;XM_013522499 XP_005400232;XP_013377953 MODEL 9013810 protein-coding Kdm4b lysine demethylase 4B ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K9 demethylase activity (ortholog); INVOLVED IN brain development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); autosomal dominant intellectual developmental disorder 65 (ortholog); breast cancer (ortholog); FOUND IN nucleoplasm (ortholog); pericentric heterochromatin (ortholog) NW_004955495 4019066 4101577 - 102029641 AGCD01061894;AGCD01061895;AGCD01061896;GBCB01038901;XM_005405772;XM_005405773;XM_005405774;XM_013505294 XP_005405829;XP_005405830;XP_005405831;XP_013360748 MODEL 9003609 protein-coding Acsm4 acyl-CoA synthetase medium chain family member 4 ENCODES a protein that exhibits decanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); fatty-acyl-CoA synthase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; FOUND IN mitochondrion (ortholog) NW_004955493 6023 31418 + 102028428 AGCD01060835;GBBH01184454;XM_005405028 XP_005405085 MODEL 9005317 protein-coding Hip1 huntingtin interacting protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); AP-2 adaptor complex binding (ortholog); clathrin binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); clathrin coat assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955456 14389282 14529317 - 102004457 AGCD01046639;AGCD01046640;GBCQ01095220;XM_005396796;XM_005396797;XM_005396798 XP_005396853;XP_005396854;XP_005396855 MODEL 10386019 ncrna LOC106150028 uncharacterized LOC106150028 NW_004955461 8271377 8274545 - 106150028 AGCD01048927;XR_001236557 MODEL 8904653 ncrna LOC102016699 uncharacterized LOC102016699 NW_004955474 9522543 9531611 - 102016699 AGCD01054571;XR_263602 MODEL 8923676 protein-coding Dmgdh dimethylglycine dehydrogenase ENCODES a protein that exhibits dimethylglycine dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); folic acid binding (ortholog); INVOLVED IN choline catabolic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH dimethylglycine dehydrogenase deficiency (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955425 22045977 22103381 + 102025029 AGCD01025813;AGCD01025814;AGCD01025815;GBCQ01038360;XM_013514886 XP_013370340 MODEL 8950831 protein-coding LOC102016365 solute carrier organic anion transporter family member 1B3 NW_004955413 16924713 17015963 - 102016365 AGCD01014117;AGCD01014118;AGCD01014119;AGCD01014120;AGCD01014121;AGCD01014122;AGCD01014123;AGCD01014124;GBCQ01101850;XM_005379055;XM_013511266;XM_013511267 XP_005379112;XP_013366720;XP_013366721 MODEL 9047052 pseudo LOC102023999 transcription elongation factor B polypeptide 1 pseudogene NW_004955471 5953821 5955145 - 102023999 AGCD01053115 MODEL 9030080 protein-coding Il10rb interleukin 10 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN interleukin-10-mediated signaling pathway (ortholog); positive regulation of cellular respiration (ortholog); positive regulation of receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); COVID-19 (ortholog); graft-versus-host disease (ortholog) NW_004955407 32641097 32659360 + 102019141 AGCD01007680;GBBH01051844;GBBH01051845;XM_005375678 XP_005375735 MODEL 8768551 protein-coding Gsc2 goosecoid homeobox 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) NW_004955442 18824187 18825760 + 102017820 AGCD01038020;AGCD01038021;GBCQ01189947;XM_005391872 XP_005391929 MODEL 8955703 protein-coding Fgf12 fibroblast growth factor 12 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); heparin binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 47 (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955420 15783184 16310743 + 102009951 AGCD01020981;AGCD01020982;AGCD01020983;AGCD01020984;AGCD01020985;AGCD01020986;AGCD01020987;AGCD01020988;AGCD01020989;GBDI01270942;XM_005383217;XM_013513605 XP_005383274;XP_013369059 MODEL 8714545 pseudo LOC102008336 60S ribosomal protein L13 pseudogene NW_004955508 1222169 1222822 + 102008336 AGCD01065759 MODEL 8936266 protein-coding LOC102010612 olfactory receptor 10AG1-like NW_004955511 892359 900459 - 102010612 AGCD01066346;XM_005408216 XP_005408273 MODEL 8865387 protein-coding Kdm6a lysine demethylase 6A ENCODES a protein that exhibits chromatin DNA binding (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to endothelin (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); FOUND IN histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog); nucleus (ortholog) NW_004955516 3151350 3346832 - 102029654 AGCD01067484;AGCD01067485;AGCD01067486;AGCD01067487;AGCD01067488;AGCD01067489;GBDJ01083590;XM_005408986;XM_005408987;XM_005408989;XM_005408990;XM_005408992 XP_005409043;XP_005409044;XP_005409046;XP_005409047;XP_005409049 MODEL 8944925 protein-coding Ap1s1 adaptor related protein complex 1 subunit sigma 1 INVOLVED IN response to virus (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH genetic disease (ortholog); intrahepatic cholestasis (ortholog); lipid storage disease (ortholog); FOUND IN Golgi apparatus (ortholog); presynapse (ortholog); terminal bouton (ortholog) NW_004955456 16127877 16134039 - 102026945 AGCD01046690;GBCB01008302;XM_005396868;XM_005396869 XP_005396925;XP_005396926 MODEL 8936036 protein-coding Ak7 adenylate kinase 7 ENCODES a protein that exhibits AMP kinase activity (ortholog); dCMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); primary ciliary dyskinesia (ortholog); spermatogenic failure 27 (ortholog); FOUND IN cytosol (ortholog); sperm principal piece (ortholog) NW_004955438 18178822 18233051 + 102023529 AGCD01035466;AGCD01035467;GBDF01008611;GBDK01130472;XM_005390399 XP_005390456 MODEL 9065638 protein-coding LOC102008710 olfactory receptor 8B4-like NW_004955412 25399638 25400570 - 102008710 AGCD01013151;XM_005378422 XP_005378479 MODEL 8946871 protein-coding Evpl envoplakin INVOLVED IN keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); regulation of antibacterial peptide production (ortholog); FOUND IN cornified envelope (ortholog); cytosol (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955506 6227488 6246339 + 102007355 AGCD01065403;AGCD01065404;GBDK01022181;XM_005407464 XP_005407521 MODEL 39131782 rrna 5S_rRNA 5S ribosomal RNA 8724933 protein-coding Crnkl1 crooked neck pre-mRNA splicing factor 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cerebral cortex development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955415 28158351 28171335 - 102021756 AGCD01016638;GBDJ01385616;XM_005380946 XP_005381003 MODEL 8719129 protein-coding LOC102006846 peptidoglycan recognition protein 3 NW_004955592 116878 131316 + 102006846 AGCD01076300;GBCQ01082261;XM_005414605;XM_013509976;XM_013509977 XP_005414662;XP_013365430;XP_013365431 MODEL 8794318 protein-coding Cap2 cyclase associated actin cytoskeleton regulatory protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); regulation of modification of postsynaptic actin cytoskeleton (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Dilated Cardiomyopathy 2I (ortholog); hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); postsynaptic density (ortholog) NW_004955483 8484427 8602748 - 102023267 AGCD01057837;AGCD01057838;AGCD01057839;GBDI01292666;XM_005403406 XP_005403463 MODEL 8721043 ncrna LOC102009858 uncharacterized LOC102009858 NW_004955426 4649998 4654801 + 102009858 AGCD01026105;GBDF01248724;XR_261189 MODEL 8868000 pseudo LOC102013730 UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like NW_004955493 1759541 1760151 - 102013730 AGCD01060904 MODEL 8997881 protein-coding LOC102005068 olfactory receptor 8K3-like NW_004955511 1446139 1447077 + 102005068 AGCD01066367;XM_005407961 XP_005408018 MODEL 8826098 pseudo LOC102019819 40S ribosomal protein S15a pseudogene NW_004955423 1535960 1536367 - 102019819 AGCD01023440 MODEL 39133987 misc_rna 7SK 7SK RNA 8788416 ncrna LOC102012223 uncharacterized LOC102012223 NW_004955506 891734 899069 - 102012223 AGCD01065239;AGCD01065240;GBBH01030954;XR_264313 MODEL 39132558 rrna 5S_rRNA 5S ribosomal RNA 8902660 protein-coding LOC102021267 olfactory receptor 5AL1-like NW_004955511 1538367 1539479 + 102021267 AGCD01066371;XM_005408235 XP_005408292 MODEL 8794307 ncrna LOC102020833 uncharacterized LOC102020833 NW_004955518 3974555 3992147 - 102020833 AGCD01067816;GBDF01118991;XR_264571 MODEL 8752739 protein-coding Cldn8 claudin 8 ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955407 29563982 29568728 - 102028719 AGCD01007610;GBCQ01002773;XM_005375624;XM_013504074 XP_005375681;XP_013359528 MODEL 9063594 protein-coding Septin7 septin 7 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); identical protein binding (ortholog); structural constituent of postsynapse (ortholog); INVOLVED IN collateral sprouting (ortholog); cortical cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); FOUND IN actin cytoskeleton (ortholog); axon terminus (ortholog); axoneme (ortholog) NW_004955460 7287452 7374747 - 102005571 AGCD01048480;GBCE01002152;XM_005397770;XM_005397771;XM_013521220 XP_005397827;XP_005397828;XP_013376674 MODEL 39131644 rrna 5S_rRNA 5S ribosomal RNA 9016990 protein-coding Gata4 GATA binding protein 4 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); co-SMAD binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); ASSOCIATED WITH 46,XY sex reversal 3 (ortholog); alcohol use disorder (ortholog); Animal Disease Models (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955403 52958318 53029267 + 102029354 AGCD01003023;AGCD01003024;AGCD01003025;AGCD01003026;AGCD01003027;GBDF01085885;GBDF01085887;XM_005373824;XM_013514543;XM_013514548;XM_013514552 XP_005373881;XP_013369997;XP_013370002;XP_013370006 MODEL 8855913 ncrna LOC102005833 uncharacterized LOC102005833 NW_004955516 4052159 4191251 + 102005833 AGCD01067516;AGCD01067517;AGCD01067518;AGCD01067519;GBBH01058464;XR_264537 MODEL 8707315 pseudo LOC102014876 AN1-type zinc finger protein 1 pseudogene NW_004955411 9595102 9617042 + 102014876 AGCD01011760;AGCD01011761 MODEL 8998229 protein-coding CUNH9orf85 chromosome unknown C9orf85 homolog NW_004955434 1208236 1261788 - 102020156 AGCD01032059;GBDK01324388;XM_005388520;XM_013516345 XP_005388577;XP_013371799 MODEL 39134260 misc_rna 7SK 7SK RNA 9065987 pseudo LOC102015977 zinc finger protein 14-like NW_004955432 4626616 4648702 + 102015977 AGCD01030733 MODEL 8750669 protein-coding Elmo2 engulfment and cell motility 2 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Primary Intraosseous Vascular Malformation (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955445 10943838 10982653 + 102018868 AGCD01039680;GBCE01117628;XM_005392377;XM_005392380 XP_005392434;XP_005392437 MODEL 8863922 protein-coding Dusp26 dual specificity phosphatase 26 ENCODES a protein that exhibits p53 binding (ortholog); phosphoprotein phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell adhesion (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) NW_004955463 9712943 9718959 - 102008926 AGCD01049796;GBCB01005948;GBCQ01009430;XM_005398407 XP_005398464 MODEL 8931583 protein-coding Acsm5 acyl-CoA synthetase medium chain family member 5 FOUND IN mitochondrion (ortholog) NW_004955442 4047059 4075158 + 102014397 AGCD01037517;GBCQ01063612;XM_005391127;XM_005391128 XP_005391184;XP_005391185 MODEL 9003770 protein-coding Bco1 beta-carotene oxygenase 1 ENCODES a protein that exhibits beta-carotene 15,15'-dioxygenase activity (ortholog); INVOLVED IN beta-carotene metabolic process (ortholog); carotene catabolic process (ortholog); retinal metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Hypercarotenemia and Vitamin A Deficiency, Autosomal Dominant (ortholog) NW_004955522 3985515 4018116 + 102004509 AGCD01068410;AGCD01068411;AGCD01068412;GBBH01095123;XM_005409358 XP_005409415 MODEL 8935425 protein-coding Trib3 tribbles pseudokinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); Insulin Resistance (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955597 259209 265896 + 102020072 AGCD01076551;AGCD01076552;GBBH01224966;XM_005414716 XP_005414773 MODEL 9065183 pseudo LOC102017121 ATP synthase mitochondrial F1 complex assembly factor 1 pseudogene NW_004955415 33142829 33143963 + 102017121 AGCD01016752 MODEL 8744411 pseudo LOC102017875 high mobility group protein B1 pseudogene NW_004955418 4498538 4499208 + 102017875 AGCD01018825 MODEL 8876213 protein-coding Inpp5j inositol polyphosphate-5-phosphatase J ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN cytoplasm (ortholog); dendritic shaft (ortholog); growth cone (ortholog) NW_004955455 5304346 5314432 + 102005008 AGCD01045720;GBDF01023354;XM_013520477;XM_013520478 XP_013375931;XP_013375932 MODEL 8794520 protein-coding LOC102003335 olfactory receptor 2S2-like NW_004955472 333588 338863 + 102003335 AGCD01053329;GBDK01098752;XM_005400985;XM_013522931 XP_005401042;XP_013378385 MODEL 8976447 protein-coding Ctsw cathepsin W NW_004955422 19439997 19443451 - 102024811 AGCD01023006;GBDJ01229701;XM_005384446;XM_005384447 XP_005384503;XP_005384504 MODEL 8728616 protein-coding Il11 interleukin 11 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-11 receptor binding (ortholog); INVOLVED IN interleukin-11-mediated signaling pathway (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of hormone secretion (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cystitis (ortholog); Edema (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) NW_004955567 868272 883563 + 102024172 AGCD01074441;AGCD01074442;AGCD01074443;GBDF01023421;XM_005413324;XM_005413325;XM_013509308;XM_013509309 XP_005413381;XP_005413382;XP_013364762;XP_013364763 MODEL 8816567 pseudo LOC102010616 60S ribosomal protein L28 pseudogene NW_004955516 3854520 3859651 - 102010616 AGCD01067515 MODEL 8903147 pseudo LOC102022286 WW domain-binding protein 11 pseudogene NW_004955479 5664384 5666264 - 102022286 AGCD01056360 MODEL 8797575 protein-coding Cldn9 claudin 9 ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN cell-cell junction organization (ortholog); tight junction organization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 116 (ortholog); Hearing Loss (ortholog); nonsyndromic deafness (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); plasma membrane (ortholog) NW_004955442 14326705 14328150 - 102008464 AGCD01037810;GBBH01034314;XM_005391380 XP_005391437 MODEL 39133380 snrna U2 U2 spliceosomal RNA 9045345 pseudo LOC102016700 nucleoporin p54-like NW_004955475 8961087 8962726 - 102016700 AGCD01055054 MODEL 8888424 protein-coding Psmb7 proteasome 20S subunit beta 7 INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); coat/hair pigmentation trait (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955419 3706273 3761603 + 102024910 AGCD01019733;GBDF01010387;XM_005382496 XP_005382553 MODEL 8929205 pseudo LOC102005835 transcription initiation factor TFIID subunit 2-like NW_004955433 1848991 1866778 - 102005835 AGCD01031371;AGCD01031372 MODEL 8922686 protein-coding LOC102024001 mas-related G-protein coupled receptor member A-like NW_004955414 33461482 33462480 - 102024001 AGCD01015809;XM_005380535 XP_005380592 MODEL 39131783 rrna 5S_rRNA 5S ribosomal RNA 8886609 protein-coding Dmkn dermokine INVOLVED IN cornified envelope assembly (ortholog); establishment of skin barrier (ortholog); response to humidity (ortholog); FOUND IN extracellular space (ortholog) NW_004955468 4724652 4738556 - 102019377 AGCD01051919;GBDI01255898;XM_005400058;XM_013522526;XM_013522527;XM_013522528;XM_013522529;XM_013522530 XP_005400115;XP_013377980;XP_013377981;XP_013377982;XP_013377983;XP_013377984 MODEL 9061448 ncrna LOC102009859 uncharacterized LOC102009859 NW_004955427 7919836 7924927 + 102009859 AGCD01027059;GBDF01303674;XR_001234333;XR_001234334 MODEL 8741063 protein-coding Vwa2 von Willebrand factor A domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); regulation of insulin receptor signaling pathway (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955431 19224373 19274475 + 102016083 AGCD01030445;AGCD01030446;AGCD01030447;GBDI01115147;XM_005387824;XM_005387825;XM_013515834 XP_005387881;XP_005387882;XP_013371288 MODEL 8833039 protein-coding LOC102012976 guanylate-binding protein 6 NW_004955423 5080353 5100169 - 102012976 AGCD01023554;AGCD01023555;GBCQ01164165;XM_005385101;XM_005385102;XM_005385103 XP_005385158;XP_005385159;XP_005385160 MODEL 8720612 pseudo LOC102019823 dual specificity protein kinase TTK pseudogene NW_004955425 15961112 15962176 + 102019823 AGCD01025594 MODEL 39132449 snrna U6 U6 spliceosomal RNA 8811311 protein-coding LOC102013734 interferon-induced guanylate-binding protein 1-like NW_004955423 5149254 5165228 + 102013734 AGCD01023556;GBBH01003827;XM_005385104 XP_005385161 MODEL 8807301 protein-coding Gsdma gasdermin A ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); pyroptotic inflammatory response (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955451 14650342 14663609 + 102006857 AGCD01043565;GBDF01254326;XM_005394337;XM_005394338;XM_013519193;XM_013519194 XP_005394394;XP_005394395;XP_013374647;XP_013374648 MODEL 8840050 protein-coding Tgm2 transglutaminase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); GTP binding (ortholog); histone dopaminyltransferase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); blood vessel remodeling (ortholog); branching involved in salivary gland morphogenesis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Breast Neoplasms (ortholog); celiac disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955445 18544192 18576576 + 102014186 AGCD01039906;GBCB01061029;XM_005392542 XP_005392599 MODEL 8829781 protein-coding Fgf13 fibroblast growth factor 13 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN apoptotic process (ortholog); branching morphogenesis of a nerve (ortholog); cerebral cortex cell migration (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 90 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955489 6122707 6621624 + 102008113 AGCD01059957;AGCD01059958;AGCD01059959;AGCD01059960;AGCD01059961;AGCD01059962;GBCB01043793;XM_005404571;XM_005404572;XM_005404573;XM_013504503 XP_005404628;XP_005404629;XP_005404630;XP_013359957 MODEL 8807574 protein-coding Kazn kazrin, periplakin interacting protein FOUND IN cornified envelope (ortholog); cytosol (ortholog); desmosome (ortholog) NW_004955527 2963713 3970331 - 102016843 AGCD01069473;AGCD01069474;AGCD01069475;AGCD01069476;AGCD01069477;AGCD01069478;AGCD01069479;AGCD01069480;AGCD01069481;AGCD01069482;AGCD01069483;AGCD01069484;AGCD01069485;AGCD01069486;AGCD01069487;AGCD01069488;AGCD01069489;AGCD01069490;AGCD01069491;GBDK01215745;XM_005409886;XM_005409887;XM_013507404 XP_005409943;XP_005409944;XP_013362858 MODEL 39132559 rrna 5S_rRNA 5S ribosomal RNA 39131311 protein-coding AP1S2 adaptor related protein complex 1 subunit sigma 2 8767165 protein-coding LOC102019480 myosin-7 NW_004955409 36905845 36928140 + 102019480 AGCD01010483;AGCD01010484;GBCB01040294;XM_005377179 XP_005377236 MODEL 10115520 ncrna LOC106150029 uncharacterized LOC106150029 NW_004955461 43852 50652 - 106150029 AGCD01048788;GBDF01054958;XR_001236560;XR_001236561 MODEL 8730064 protein-coding Kdm6b lysine demethylase 6B ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cell fate commitment (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); breast carcinoma (ortholog); Developmental Disease (ortholog); FOUND IN nucleus (ortholog) NW_004955467 9085239 9106658 - 102004587 AGCD01051483;AGCD01051484;GBCE01170346;XM_005399460;XM_005399461;XM_013522060;XM_013522061;XM_013522062;XM_013522063;XM_013522064 XP_005399517;XP_005399518;XP_013377514;XP_013377515;XP_013377516;XP_013377517;XP_013377518 MODEL 8800273 protein-coding Atp10a ATPase phospholipid transporting 10A (putative) ENCODES a protein that exhibits glycosylceramide flippase activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN positive regulation of membrane tubulation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) NW_004955533 3413607 3533834 + 102004971 AGCD01070420;AGCD01070421;AGCD01070422;GBBH01209305;GBDF01088495;XM_005410422 XP_005410479 MODEL 8743533 protein-coding Evx1 even-skipped homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryo development ending in birth or egg hatching (ortholog); interneuron migration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN axon (ortholog); cell body (ortholog) NW_004955410 28939416 28942751 + 102007748 AGCD01011267;XM_005377464 XP_005377521 MODEL 8759476 protein-coding Hip1r huntingtin interacting protein 1 related ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); clathrin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); digestive system development (ortholog); intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN apical plasma membrane (ortholog); cell cortex (ortholog); clathrin-coated pit (ortholog) NW_004955482 5885807 5896386 - 102028196 AGCD01057356;GBDJ01087807;GBDK01131500;XM_013503574 XP_013359028 MODEL 8828800 protein-coding Gata5 GATA binding protein 5 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cardiac jelly development (ortholog); cellular response to BMP stimulus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); aortic valve disease 1 (ortholog); ARTERIAL DISSECTION (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955528 1595231 1604979 + 102012999 AGCD01069566;GBDJ01420985;XM_005410057 XP_005410114 MODEL 8991270 protein-coding Inppl1 inositol polyphosphate phosphatase like 1 ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN actin filament organization (ortholog); apoptotic process (ortholog); endochondral ossification (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; phosphatidylinositol 3-kinase class I signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN basal plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 19146304 19163923 - 102026208 AGCD01015301;AGCD01015302;GBDF01162302;GBDI01065852;XM_005379991;XM_005379992 XP_005380048;XP_005380049 MODEL 9029793 pseudo LOC102006849 RNA-binding protein FUS-like NW_004955402 44011709 44055168 + 102006849 AGCD01001085;AGCD01001086 MODEL 8724078 protein-coding Dusp28 dual specificity phosphatase 28 ENCODES a protein that exhibits phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog) NW_004955542 909239 911139 - 102018333 AGCD01071484;AGCD01071485;GBBH01102815;XM_005411166 XP_005411223 MODEL 9031711 ncrna LOC102005842 uncharacterized LOC102005842 NW_004955439 2255721 2292358 + 102005842 AGCD01035638;AGCD01035639;AGCD01035640;GBBH01163336;XR_001235211;XR_001235212;XR_261967 MODEL 8980917 protein-coding Acss1 acyl-CoA synthetase short chain family member 1 ENCODES a protein that exhibits acetate-CoA ligase activity (ortholog); propionate-CoA ligase activity (ortholog); INVOLVED IN acetate biosynthetic process (ortholog); acetyl-CoA biosynthetic process (ortholog); propionate biosynthetic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; malonic aciduria pathway; ASSOCIATED WITH Experimental Melanoma (ortholog); Hypothermia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955415 31117542 31154654 - 102009378 AGCD01016669;GBDJ01083439;XM_005380983 XP_005381040 MODEL 8868131 ncrna LOC102021271 uncharacterized LOC102021271 NW_004955433 9333586 9352335 + 102021271 AGCD01031611;GBDF01224018;XR_001234712;XR_261576 MODEL 39131645 rrna 5S_rRNA 5S ribosomal RNA 8899355 protein-coding LOC102020835 zinc finger protein 14-like NW_004955524 1501075 1530183 - 102020835 AGCD01068755;GBDF01157491;XM_013507322;XM_013507323;XM_013507324 XP_013362776;XP_013362777;XP_013362778 MODEL 8979720 protein-coding LOC102003337 olfactory receptor 51G2-like NW_004955414 20918933 20919880 - 102003337 AGCD01015395;XM_005380486 XP_005380543 MODEL 9035762 protein-coding Kbtbd11 kelch repeat and BTB domain containing 11 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955403 57796246 57818666 - 102024301 AGCD01003158;AGCD01003159;AGCD01003160;GBCB01098397;GBDI01221487;XM_013515002 XP_013370456 MODEL 9029295 protein-coding Pla2g3 phospholipase A2 group III ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipase activity (ortholog); obsolete calcium-dependent phospholipase A2 activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cell development (ortholog); cell maturation (ortholog); FOUND IN centriole (ortholog); recycling endosome (ortholog) NW_004955455 5314520 5320151 - 102004676 AGCD01045720;GBCC01027921;XM_005396297;XM_013520479;XM_013520480 XP_005396354;XP_013375933;XP_013375934 MODEL 39134261 misc_rna 7SK 7SK RNA 8775535 protein-coding CUNHXorf38 chromosome unknown CXorf38 homolog FOUND IN mitochondrion (ortholog) NW_004955565 1963195 1983171 + 102004987 AGCD01074336;GBBH01007180;XM_005413269;XM_005413270 XP_005413326;XP_005413327 MODEL 8859166 protein-coding Crnn cornulin INVOLVED IN cell-cell adhesion (ortholog); keratinocyte activation (ortholog); response to heat (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955589 47743 75383 + 102007833 AGCD01076152;AGCD01076153;GBDF01239353;XM_005414526;XM_013509932;XM_013509933;XM_013509934;XM_013509935 XP_005414583;XP_013365386;XP_013365387;XP_013365388;XP_013365389 MODEL 39133384 snrna U2 U2 spliceosomal RNA 8837543 protein-coding Cldnd1 claudin domain containing 1 FOUND IN apical plasma membrane (ortholog) NW_004955427 101159 108655 - 102014807 AGCD01026806;AGCD01026807;GBCC01001269;XM_005386271;XM_005386272;XM_005386273;XM_013515217 XP_005386328;XP_005386329;XP_005386330;XP_013370671 MODEL 8877694 protein-coding Capg capping actin protein, gelsolin like ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); Flemming body (ortholog) NW_004955424 2064672 2080192 + 102003781 AGCD01024262;GBCE01000802;XM_005385432;XM_005385433;XM_005385434;XM_005385435 XP_005385489;XP_005385490;XP_005385491;XP_005385492 MODEL 8936827 protein-coding LOC102005069 glycine N-acyltransferase-like protein Keg1 NW_004955511 3599452 3633026 - 102005069 AGCD01066468;AGCD01066469;GBCQ01010946;XM_005408044;XM_005408045;XM_005408046 XP_005408101;XP_005408102;XP_005408103 MODEL 8820525 pseudo LOC102017124 histone H3.3-like NW_004955416 21843586 21844067 - 102017124 AGCD01017517 MODEL 8779211 ncrna LOC102012226 uncharacterized LOC102012226 NW_004955511 1865704 1875638 + 102012226 AGCD01066381;AGCD01066382;GBDF01188738;XR_264414 MODEL 9009192 protein-coding Psmb8 proteasome 20S subunit beta 8 INVOLVED IN antigen processing and presentation (ortholog); fat cell differentiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN proteasome complex (ortholog); proteasome core complex (ortholog); spermatoproteasome complex (ortholog) NW_004955437 1500477 1504072 - 102022537 AGCD01034212;GBDJ01021170;XM_005389457 XP_005389514 MODEL 8910844 protein-coding Kdm7a lysine demethylase 7A ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH melanoma (ortholog) NW_004955494 3018395 3110528 + 102023162 AGCD01061463;AGCD01061464;AGCD01061465;AGCD01061466;GBDI01289995;XM_013504921 XP_013360375 MODEL 8858406 protein-coding Septin8 septin 8 ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN regulation of intracellular protein transport (ortholog); regulation of protein stability (ortholog); regulation of SNARE complex assembly (ortholog); FOUND IN myelin sheath (ortholog); presynapse (ortholog); septin complex (ortholog) NW_004955408 4129302 4143683 - 102003838 AGCD01008089;GBCE01094947;GBDK01003639;XM_005376114 XP_005376171 MODEL 8938572 protein-coding Ak8 adenylate kinase 8 ENCODES a protein that exhibits AMP binding (ortholog); AMP kinase activity (ortholog); dCMP kinase activity (ortholog); INVOLVED IN ventricular system development (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); sperm flagellum (ortholog) NW_004955513 2069187 2185469 - 102029775 AGCD01066868;AGCD01066869;AGCD01066870;GBBH01062292;XM_005408390;XM_013506604;XM_013506605 XP_005408447;XP_013362058;XP_013362059 MODEL 39132450 snrna U6 U6 spliceosomal RNA 8788052 pseudo LOC102022288 28S ribosomal protein S36, mitochondrial pseudogene NW_004955480 8492496 8493186 - 102022288 AGCD01056725 MODEL 8894346 protein-coding Ctsz cathepsin Z ENCODES a protein that exhibits carboxypeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN epithelial tube branching involved in lung morphogenesis (ortholog); negative regulation of plasminogen activation (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955445 586901 597753 + 102019446 AGCD01039320;GBDJ01304284;XM_005392214;XM_013518268 XP_005392271;XP_013373722 MODEL 8782905 ncrna LOC102014879 uncharacterized LOC102014879 NW_004955413 5014881 5047051 + 102014879 AGCD01013646;AGCD01013647;GBDF01082817;XR_260061 MODEL 8842280 protein-coding Vwa3a von Willebrand factor A domain containing 3A ASSOCIATED WITH urinary bladder cancer (ortholog) NW_004955493 780808 829768 + 102009069 AGCD01060864;AGCD01060865;GBBH01001724;XM_005405057;XM_005405058;XM_005405059;XM_005405060;XM_005405061;XM_005405062;XM_005405063;XM_005405064;XM_013504833;XM_013504834;XM_013504836;XM_013504837;XM_013504838;XM_013504840;XR_001231282;XR_264065;XR_264066;XR_264067;XR_264068;XR_264069;XR_264070 XP_005405114;XP_005405115;XP_005405116;XP_005405117;XP_005405118;XP_005405119;XP_005405120;XP_005405121;XP_013360287;XP_013360288;XP_013360290;XP_013360291;XP_013360292;XP_013360294 MODEL 8930116 protein-coding Tgm3 transglutaminase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); catalytic activity (ortholog); protein-glutamine gamma-glutamyltransferase activity (ortholog); INVOLVED IN keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Uncombable Hair Syndrome (ortholog); Uncombable Hair Syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955415 13391857 13435342 + 102014351 AGCD01016247;AGCD01016248;AGCD01016249;GBDI01257144;XM_005380750 XP_005380807 MODEL 10281225 ncrna LOC106150030 uncharacterized LOC106150030 NW_004955461 14354856 14355769 + 106150030 AGCD01049055;GBDF01021681;XR_001236564 MODEL 8765453 pseudo LOC102003338 zinc finger protein 3-like NW_004955415 14712827 14722881 - 102003338 AGCD01016308 MODEL 8957718 protein-coding Bco2 beta-carotene oxygenase 2 ENCODES a protein that exhibits beta,beta-carotene-9',10'-cleaving oxygenase activity (ortholog); oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (ortholog); INVOLVED IN carotene catabolic process (ortholog); carotene metabolic process (ortholog); carotenoid metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955412 13838260 13872886 + 102029836 AGCD01012846;GBDF01116400;XM_005378119;XM_013511045 XP_005378176;XP_013366499 MODEL 9012132 ncrna LOC102024003 uncharacterized LOC102024003 NW_004955416 1130935 1134505 + 102024003 AGCD01016825;GBDF01211129;XR_260345 MODEL 8938779 protein-coding Elmo3 engulfment and cell motility 3 NW_004955484 9414573 9421255 - 102010808 AGCD01058415;GBDK01048610;XM_005403678;XM_005403679;XM_013503904;XM_013503905 XP_005403735;XP_005403736;XP_013359358;XP_013359359 MODEL 8818068 protein-coding Hipk1 homeodomain interacting protein kinase 1 INVOLVED IN adherens junction assembly (ortholog); anterior/posterior pattern specification (ortholog); embryonic camera-type eye morphogenesis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955435 17201866 17257371 + 102016512 AGCD01033350;AGCD01033351;AGCD01033352;GBBH01093340;GBDF01002027;XM_013516511 XP_013371965 MODEL 8970278 protein-coding Tril TLR4 interactor with leucine rich repeats ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN regulation of cytokine production involved in immune response (ortholog); toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN lipopolysaccharide receptor complex (ortholog) NW_004955410 30497953 30503444 - 102015485 AGCD01011308;GBDK01079499;XM_005377483 XP_005377540 MODEL 8746831 protein-coding Ins insulin ENCODES a protein that exhibits zinc ion binding; hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN protein hexamerization; acute-phase response (ortholog); alpha-beta T cell activation (ortholog); PARTICIPATES IN altered insulin signaling pathway; forkhead class A signaling pathway; gliclazide pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); adenoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955422 13909408 13910419 - 102004941 AGCD01022841;AY823469;XM_005384189 AAX33327;XP_005384246 MODEL 8843157 protein-coding Dmp1 dentin matrix acidic phosphoprotein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); regulation of enamel mineralization (ortholog); ASSOCIATED WITH autosomal recessive hypophosphatemic rickets (ortholog); genetic disease (ortholog); Hypophosphatemic Rickets (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); nucleus (ortholog) NW_004955474 2188090 2200284 - 102014350 AGCD01054281;AGCD01054282;GBCE01002429;JN414501;XM_005401334 AEP17666;XP_005401391 MODEL 9007183 protein-coding CUNHXorf58 chromosome unknown CXorf58 homolog NW_004955509 4325198 4347495 + 102015332 AGCD01066064;GBCQ01050996;XM_005407834;XM_005407835 XP_005407891;XP_005407892 MODEL 8920441 ncrna LOC102012977 uncharacterized LOC102012977 NW_004955495 5748410 5760737 - 102012977 AGCD01062024;AGCD01062025;AGCD01062026;GBCB01002782;XR_001231365 MODEL 9007500 protein-coding Arrdc3 arrestin domain containing 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); INVOLVED IN fat pad development (ortholog); negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) NW_004955418 20538858 20550876 + 102029968 AGCD01019234;AGCD01019235;AGCD01019236;GBBH01061457;GBCQ01007358;XM_013513045 XP_013368499 MODEL 8833200 protein-coding Inpp5k inositol polyphosphate-5-phosphatase K ENCODES a protein that exhibits inositol bisphosphate phosphatase activity (ortholog); inositol trisphosphate phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH congenital muscular dystrophy with cataracts and intellectual disability (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955481 1651422 1674402 + 102020444 AGCD01056840;AGCD01056841;GBDF01007950;XM_013503399;XM_013503400 XP_013358853;XP_013358854 MODEL 9010362 pseudo LOC102010625 coiled-coil domain-containing protein 126 pseudogene NW_004955526 455881 456356 + 102010625 AGCD01069233 MODEL 39132562 rrna 5S_rRNA 5S ribosomal RNA 8862625 protein-coding LOC102021272 mitochondrial amidoxime reducing component 2 NW_004955520 3003740 3026832 - 102021272 AGCD01068088;GBBH01189979;GBCB01025704;XM_013507064 XP_013362518 MODEL 9051121 protein-coding Ap1s2 adaptor related protein complex 1 subunit sigma 2 INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); neuromuscular process controlling balance (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); syndromic X-linked intellectual disability 5 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955519 2351754 2370650 + 102010189 AGCD01067925;AGCD01067926;AGCD01067927;AGCD01067928;GBCB01043995;GBDK01233175;XM_005409152 XP_005409209 MODEL 8935078 protein-coding Dusp29 dual specificity phosphatase 29 ENCODES a protein that exhibits MAP kinase phosphatase activity (ortholog); protein homodimerization activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); muscle cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955437 17002269 17037750 + 102028894 AGCD01034729;AGCD01034730;GBBH01060435;XM_013517070;XM_013517071;XM_013517072;XM_013517073;XM_013517074 XP_013372524;XP_013372525;XP_013372526;XP_013372527;XP_013372528 MODEL 39131646 rrna 5S_rRNA 5S ribosomal RNA 8986517 ncrna LOC102019483 uncharacterized LOC102019483 NW_004955411 12939284 12945654 - 102019483 AGCD01011861;GBDF01122716;XR_259935 MODEL 39131784 rrna 5S_rRNA 5S ribosomal RNA 8706439 protein-coding LOC102006850 vomeronasal type-1 receptor 2-like NW_004955603 165496 166395 - 102006850 AGCD01076814;XM_005414836 XP_005414893 MODEL 8818471 protein-coding Atp10b ATPase phospholipid transporting 10B (putative) ENCODES a protein that exhibits glycosylceramide flippase activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN lysosomal membrane organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955408 14495165 14815648 - 102028828 AGCD01008399;AGCD01008400;AGCD01008401;AGCD01008402;AGCD01008403;AGCD01008404;AGCD01008405;AGCD01008406;AGCD01008407;GBCQ01000712;XM_005376268;XM_005376269;XM_005376270 XP_005376325;XP_005376326;XP_005376327 MODEL 9016047 protein-coding LOC102009861 zinc finger protein 420-like NW_004955429 13414895 13444098 + 102009861 AGCD01028748;AGCD01028749;GBDF01252222;XM_013515503;XM_013515504;XM_013515505;XM_013515506 XP_013370957;XP_013370958;XP_013370959;XP_013370960 MODEL 8975972 pseudo LOC102005070 olfactory receptor 5D18-like NW_004955511 636613 637572 + 102005070 AGCD01066336 MODEL 8892553 ncrna LOC102024006 uncharacterized LOC102024006 NW_004955417 28844701 28851338 - 102024006 AGCD01018588;GBDK01125490;XR_260512 MODEL 8811443 protein-coding LOC102019826 cytochrome P450 2C23-like NW_004955507 5971641 6011264 - 102019826 AGCD01065693;AGCD01065694;GBDF01082078;XM_013506229 XP_013361683 MODEL 9000542 protein-coding Gngt2 G protein subunit gamma transducin 2 ENCODES a protein that exhibits GTPase activity (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN heterotrimeric G-protein complex (ortholog) NW_004955451 12248916 12252101 + 102027478 AGCD01043380;GBDK01028530;XM_005394219;XM_005394220;XM_013519114 XP_005394276;XP_005394277;XP_013374568 MODEL 9039159 protein-coding LOC102017879 A-kinase anchor protein 2 NW_004955419 16940266 17406309 - 102017879 AGCD01020138;AGCD01020139;AGCD01020140;AGCD01020141;AGCD01020142;AGCD01020143;AGCD01020144;AGCD01020145;AGCD01020146;AGCD01020147;AGCD01020148;AGCD01020149;AGCD01020150;AGCD01020151;GBDI01328539;GBDK01021121;XM_005382747 XP_005382804 MODEL 39133988 misc_rna 7SK 7SK RNA 9031922 protein-coding LOC102020837 ubiquitin-conjugating enzyme E2 D2-like NW_004955525 2253543 2264996 + 102020837 AGCD01069082;AGCD01069083;AGCD01069084;GBDF01048297;XM_005409733;XM_013507345;XM_013507346 XP_005409790;XP_013362799;XP_013362800 MODEL 8770891 protein-coding Ak9 adenylate kinase 9 ENCODES a protein that exhibits nucleoside diphosphate kinase activity (ortholog); nucleoside monophosphate kinase activity (ortholog); ASSOCIATED WITH normal pressure hydrocephalus (ortholog); spermatogenic failure 89 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955402 704 128521 - 102003075 AGCD01000001;AGCD01000002;AGCD01000003;AGCD01000004;AGCD01000005;AGCD01000006;AGCD01000007;AGCD01000008;GBDF01190641;XM_005372536;XM_005372537;XM_005372538;XM_005372541;XM_005372542;XM_013512310;XM_013512375 XP_005372593;XP_005372594;XP_005372595;XP_005372598;XP_005372599;XP_013367764;XP_013367829 MODEL 39134262 misc_rna 7SK 7SK RNA 8800425 protein-coding Evx2 even-skipped homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN limb morphogenesis (ortholog); ASSOCIATED WITH Synpolydactyly 1 (ortholog) NW_004955403 20578813 20582409 + 102006198 AGCD01002167;AGCD01002168;XM_005373888 XP_005373945 MODEL 8872317 protein-coding Cttn cortactin ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); profilin binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell motility (ortholog); dendritic spine maintenance (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Leukoplakia (ortholog); squamous cell carcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell junction (ortholog) NW_004955422 15838036 15874067 - 102019074 AGCD01022882;AGCD01022883;GBCQ01005954;XM_005384232;XM_005384233;XM_013514240 XP_005384289;XP_005384290;XP_013369694 MODEL 9021646 protein-coding Kbtbd12 kelch repeat and BTB domain containing 12 NW_004955429 15698544 15760071 - 102027436 AGCD01028814;AGCD01028815;AGCD01028816;AGCD01028817;GBCB01020016;XM_005387047;XM_013515489 XP_005387104;XP_013370943 MODEL 8930623 protein-coding LOC102014880 apolipoprotein L2-like NW_004955413 22577458 22591075 + 102014880 AGCD01014306;AGCD01014307;AGCD01014308;GBDK01241035;XM_005379145;XM_005379146;XM_005379147;XM_013511669 XP_005379202;XP_005379203;XP_005379204;XP_013367123 MODEL 8877296 protein-coding Pla2g4a phospholipase A2 group IVA ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); arachidonate secretion (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; endothelin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); amyotrophic lateral sclerosis (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955406 25257361 25392079 + 102014413 AGCD01006223;AGCD01006224;AGCD01006225;AGCD01006226;AGCD01006227;AGCD01006228;AGCD01006229;AGCD01006230;GBCE01023640;XM_005375092;XM_013521775 XP_005375149;XP_013377229 MODEL 9050262 protein-coding Fam170b family with sequence similarity 170 member B INVOLVED IN positive regulation of acrosome reaction (ortholog); regulation of fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog); outer acrosomal membrane (ortholog) NW_004955556 1072826 1075332 + 102004125 AGCD01073185;GBDK01291965;XM_005412573 XP_005412630 MODEL 8875480 protein-coding Tgm4 transglutaminase 4 INVOLVED IN mating plug formation (ortholog); ASSOCIATED WITH essential tremor (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); Golgi apparatus (ortholog) NW_004955420 26736880 26766386 - 102010493 AGCD01021427;AGCD01021428;AGCD01021429;AGCD01021430;GBDI01171952;GBDJ01424037;XM_005383619 XP_005383676 MODEL 8844256 protein-coding Crocc ciliary rootlet coiled-coil, rootletin ENCODES a protein that exhibits actin binding (ortholog); kinesin binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); centrosome cycle (ortholog); ciliary basal body organization (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN 9+2 motile cilium (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955527 1833348 1874211 - 102019427 AGCD01069417;AGCD01069418;GBBH01063573;GBCB01129983;XM_013507377 XP_013362831 MODEL 8992261 pseudo LOC102003345 tubulin alpha-1C chain-like NW_004955483 529540 535066 - 102003345 AGCD01057622;XR_263877 MODEL 8760439 pseudo LOC102005851 40S ribosomal protein S2-like NW_004955444 6571938 6576569 - 102005851 AGCD01038872;XR_262283 MODEL 8929534 protein-coding LOC102017127 histone H2B type 1 NW_004955483 851209 851809 - 102017127 AGCD01057634;XM_005403297 XP_005403354 MODEL 8749536 protein-coding Fgf14 fibroblast growth factor 14 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); cartilage disease (ortholog); cerebellar ataxia (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955404 8704344 9329917 + 102003829 AGCD01003357;AGCD01003358;AGCD01003359;AGCD01003360;AGCD01003361;AGCD01003362;AGCD01003363;AGCD01003364;AGCD01003365;AGCD01003366;AGCD01003367;AGCD01003368;GBDI01238697;XM_005374032;XM_005374033 XP_005374089;XP_005374090 MODEL 39131375 protein-coding DMP1 dentin matrix acidic phosphoprotein 1 8856710 protein-coding Kdm8 lysine demethylase 8 ENCODES a protein that exhibits aminopeptidase activity (ortholog); chromatin binding (ortholog); endopeptidase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); fibroblast proliferation (ortholog); G2/M transition of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); Coffin-Siris syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955493 5437344 5462849 + 102005605 AGCD01061068;GBCE01005243;XM_005405133;XM_005405134 XP_005405190;XP_005405191 MODEL 8977997 protein-coding Insc INSC spindle orientation adaptor protein ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of protein stability (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955414 30181402 30282279 + 102026418 AGCD01015728;AGCD01015729;AGCD01015730;GBCQ01127867;XM_013512094;XM_013512096 XP_013367548;XP_013367550 MODEL 8788450 protein-coding Trim10 tripartite motif containing 10 INVOLVED IN erythrocyte differentiation (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH irritant dermatitis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955583 268856 277079 - 102012818 AGCD01075808;GBBH01166081;XM_005414300 XP_005414357 MODEL 9042609 pseudo LOC102016701 signal recognition particle 9 kDa protein pseudogene NW_004955475 1325931 1326213 + 102016701 AGCD01054747;XM_005401698 MODEL 39132451 snrna U6 U6 spliceosomal RNA 9029969 protein-coding Septin9 septin 9 INVOLVED IN actin cytoskeleton organization (ortholog); anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adenomatous Polyps (ortholog); amyotrophic neuralgia (ortholog); FOUND IN actin cytoskeleton (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955506 4943108 5033088 - 102014381 AGCD01065350;AGCD01065351;GBBH01030877;GBDF01087331;XM_005407395 XP_005407452 MODEL 8953192 protein-coding Arrdc4 arrestin domain containing 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN extracellular vesicle biogenesis (ortholog); positive regulation of interferon-beta production (ortholog); positive regulation of ubiquitin-protein transferase activity (ortholog); FOUND IN endosome (ortholog); extracellular vesicle (ortholog); plasma membrane (ortholog) NW_004955416 25573265 25583928 + 102027407 AGCD01017590;GBCE01069752;GBDF01049169;XM_005381612 XP_005381669 MODEL 8777134 protein-coding Crocc2 ciliary rootlet coiled-coil, rootletin family member 2 ASSOCIATED WITH COVID-19 (ortholog) NW_004955542 647145 694523 - 102012804 AGCD01071475;GBBH01035127;XM_013508065;XM_013508066;XM_013508067;XM_013508068;XM_013508069;XM_013508070;XM_013508071;XM_013508072;XM_013508073;XM_013508074;XM_013508075;XM_013508076;XM_013508077;XM_013508078;XM_013508079;XR_001232162 XP_013363519;XP_013363520;XP_013363521;XP_013363522;XP_013363523;XP_013363524;XP_013363525;XP_013363526;XP_013363527;XP_013363528;XP_013363529;XP_013363530;XP_013363531;XP_013363532;XP_013363533 MODEL 8982825 protein-coding Gatad1 GATA zinc finger domain containing 1 INVOLVED IN chromatin remodeling (ortholog); ASSOCIATED WITH dilated cardiomyopathy 2B (ortholog); Heimler syndrome 1 (ortholog); hypertrophic cardiomyopathy 2 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955432 9389020 9398791 + 102003477 AGCD01030905;GBCQ01006270;GBDF01053561;XM_013515936 XP_013371390 MODEL 39132569 rrna 5S_rRNA 5S ribosomal RNA 9022162 protein-coding Acta1 actin alpha 1, skeletal muscle INVOLVED IN cellular response to potassium ion (ortholog); response to mechanical stimulus (ortholog); response to steroid hormone (ortholog); ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); aortic dissection (ortholog); centronuclear myopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); sarcomere (ortholog) NW_004955492 8644696 8647412 + 102017886 AGCD01060822;GBDK01324003;XM_005405008 XP_005405065 MODEL 39133388 snrna U2 U2 spliceosomal RNA 39131785 rrna 5S_rRNA 5S ribosomal RNA 8772465 protein-coding Vwa3b von Willebrand factor A domain containing 3B ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 22 (ortholog); Spinocerebellar Ataxias (ortholog); FOUND IN cytosol (ortholog) NW_004955470 4658088 4850277 + 102027837 AGCD01052734;AGCD01052735;AGCD01052736;AGCD01052737;AGCD01052738;AGCD01052739;GBDF01081475;XM_005400699;XM_005400700;XM_005400701;XM_005400703;XM_005400704;XM_005400705;XM_005400706;XM_005400707;XM_013522812 XP_005400756;XP_005400757;XP_005400758;XP_005400760;XP_005400761;XP_005400762;XP_005400763;XP_005400764;XP_013378266 MODEL 8892403 pseudo LOC102020854 activated RNA polymerase II transcriptional coactivator p15 pseudogene NW_004955445 1123002 1125675 + 102020854 AGCD01039329;XR_262358 MODEL 9029519 protein-coding Cfap221 cilia and flagella associated protein 221 ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); motile cilium assembly (ortholog); ASSOCIATED WITH primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 55 (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955459 10070827 10192411 - 102018900 AGCD01048179;AGCD01048180;AGCD01048181;GBDJ01164802;XM_005397660;XM_005397661;XM_013521060 XP_005397717;XP_005397718;XP_013376514 MODEL 10327998 ncrna LOC106147050 uncharacterized LOC106147050 NW_004955513 408434 416094 - 106147050 AGCD01066824;GBDF01181175;XR_001231756;XR_001231757 MODEL 8792310 protein-coding LOC102006855 ATP-binding cassette sub-family A member 13-like NW_004955765 1665 15270 + 102006855 AGCD01078307;GBDF01026194;XM_013510189 XP_013365643 MODEL 8955860 protein-coding Acss2 acyl-CoA synthetase short chain family member 2 ENCODES a protein that exhibits acetate-CoA ligase activity (ortholog); chromatin binding (ortholog); propionate-CoA ligase activity (ortholog); INVOLVED IN acetate biosynthetic process (ortholog); acetyl-CoA biosynthetic process (ortholog); lipid biosynthetic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; Leigh disease pathway; ASSOCIATED WITH Experimental Melanoma (ortholog); Inflammation (ortholog); lymphangioleiomyomatosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955422 26450899 26500336 - 102017786 AGCD01023288;GBBH01140448;XM_005384812;XM_005384813;XM_013514052 XP_005384869;XP_005384870;XP_013369506 MODEL 8702610 ncrna LOC102022290 uncharacterized LOC102022290 NW_004955418 7276604 7378661 + 102022290 AGCD01018886;AGCD01018887;AGCD01018888;AGCD01018889;AGCD01018890;GBDF01261954;XR_260543 MODEL 8790518 pseudo LOC102010631 ras-related protein Rab-18 pseudogene NW_004955438 11389072 11389615 - 102010631 AGCD01035237 MODEL 9006238 protein-coding Togaram1 TOG array regulator of axonemal microtubules 1 INVOLVED IN cilium assembly (ortholog); positive regulation of microtubule polymerization (ortholog); ASSOCIATED WITH BROWN SYNDROME (ortholog); ciliopathy (ortholog); Joubert syndrome (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955409 16885564 16967865 - 102010557 AGCD01009751;AGCD01009752;AGCD01009753;AGCD01009754;AGCD01009755;AGCD01009756;GBBH01077401;XM_005376871 XP_005376928 MODEL 8766639 protein-coding Hipk2 homeodomain interacting protein kinase 2 ENCODES a protein that exhibits DNA binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); nephrosclerosis (ortholog); ureteral obstruction (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear body (ortholog) NW_004955494 3365826 3554735 + 102024812 AGCD01061472;AGCD01061473;AGCD01061474;AGCD01061475;GBDF01157377;XM_005405432;XM_005405433;XM_005405434;XM_005405436;XM_005405437;XM_013504951;XM_013504952 XP_005405489;XP_005405490;XP_005405491;XP_005405493;XP_005405494;XP_013360405;XP_013360406 MODEL 8955270 protein-coding Gnl1 G protein nucleolar 1 INVOLVED IN DNA damage response (ortholog) NW_004955583 570573 578423 - 102016115 AGCD01075838;AGCD01075839;GBDI01171462;GBDI01171463;XM_005414308 XP_005414365 MODEL 8834948 protein-coding LOC102021273 olfactory receptor 2J3-like NW_004955524 178638 179582 - 102021273 AGCD01068669;XM_005409656 XP_005409713 MODEL 39131647 rrna 5S_rRNA 5S ribosomal RNA 10162726 protein-coding LOC106150031 translation initiation factor IF-2-like NW_004955461 4786578 4786856 - 106150031 AGCD01048875;GBBH01162760;GBCE01152258;XM_013521327 XP_013376781 MODEL 8791405 protein-coding Ap1s3 adaptor related protein complex 1 subunit sigma 3 INVOLVED IN protein targeting (ortholog); ASSOCIATED WITH psoriasis (ortholog); psoriasis 15 (ortholog) NW_004955453 10183640 10242195 + 102021206 AGCD01044782;AGCD01044783;GBCE01115394;XM_005395487;XM_013519980 XP_005395544;XP_013375434 MODEL 8834093 protein-coding Psmb9 proteasome 20S subunit beta 9 ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to electrical stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); adult respiratory distress syndrome (ortholog); ankylosing spondylitis (ortholog); FOUND IN cytosol (ortholog); proteasome complex (ortholog); proteasome core complex (ortholog) NW_004955437 1513425 1516164 + 102023191 AGCD01034213;GBBH01002903;GBCB01109043;XM_005389459 XP_005389516 MODEL 8984525 protein-coding Bcor BCL6 corepressor ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); anterior segment dysgenesis 8 (ortholog); FOUND IN BCOR complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955566 1412540 1510339 - 102008470 AGCD01074359;AGCD01074360;AGCD01074361;AGCD01074362;AGCD01074363;GBBH01126083;XM_005413277;XM_005413278;XM_005413279;XM_005413280;XM_005413281;XM_013509214;XM_013509215;XM_013509216;XM_013509217 XP_005413334;XP_005413335;XP_005413336;XP_005413337;XP_005413338;XP_013364668;XP_013364669;XP_013364670;XP_013364671 MODEL 8824767 protein-coding LOC102014882 uncharacterized LOC102014882 NW_004955468 362440 368615 + 102014882 AGCD01051693;GBDK01298141;XM_013522288 XP_013377742 MODEL 9067286 protein-coding CUNHXorf65 chromosome unknown CXorf65 homolog ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gene expression (ortholog); transcription by RNA polymerase II (ortholog) NW_004955475 10674333 10676485 - 102029508 AGCD01055108;GBDF01250388;XM_005401644;XM_005401645;XM_005401646;XM_005401647 XP_005401701;XP_005401702;XP_005401703;XP_005401704 MODEL 8924439 pseudo LOC102005074 ferritin heavy chain-like NW_004955515 5069307 5090074 - 102005074 AGCD01067337 MODEL 9043617 pseudo LOC102003347 ras-related protein Rab-5A pseudogene NW_004955419 16896961 16899862 + 102003347 AGCD01020131;AGCD01020132;AGCD01020133 MODEL 8797187 pseudo LOC102024009 prefoldin subunit 1 pseudogene NW_004955484 7047221 7048723 - 102024009 AGCD01058306 MODEL 8970783 protein-coding LOC102009862 olfactory receptor 1440 NW_004955511 3826101 3827067 - 102009862 AGCD01066477;XM_005408060 XP_005408117 MODEL 8747795 ncrna LOC102019827 uncharacterized LOC102019827 NW_004955508 4370021 4372570 - 102019827 AGCD01065866;GBDK01166181;XR_264395 MODEL 8803977 protein-coding Cfap251 cilia and flagella associated protein 251 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); spermatogenic failure 18 (ortholog); spermatogenic failure 33 (ortholog); FOUND IN sperm end piece (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955482 6508563 6553561 - 102030197 AGCD01057399;AGCD01057400;AGCD01057401;AGCD01057402;GBDF01005425;GBDJ01271432;XM_013503582 XP_013359036 MODEL 8985675 protein-coding LOC102017882 nuclear receptor subfamily 1 group I member 3-like NW_004955489 1878193 1883606 - 102017882 AGCD01059853;GBCQ01063310;XM_005404517;XM_005404518;XM_005404519 XP_005404574;XP_005404575;XP_005404576 MODEL 8812046 protein-coding Capn1 calpain 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); mammary gland involution (ortholog); negative regulation of actin filament polymerization (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); aortic atherosclerosis (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 20006448 20026984 - 102014143 AGCD01023057;GBDJ01022899;XM_005384508;XM_005384509 XP_005384565;XP_005384566 MODEL 8931996 pseudo LOC102012227 DNA/RNA-binding protein KIN17 pseudogene NW_004955511 978926 980086 + 102012227 AGCD01066350 MODEL 8732067 protein-coding Dusp3 dual specificity phosphatase 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); MAP kinase phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); dephosphorylation (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); cytosol (ortholog); immunological synapse (ortholog) NW_004955451 17064739 17069964 - 102004773 AGCD01043716;GBCB01004598;GBDF01053135;XM_013519428 XP_013374882 MODEL 8940144 protein-coding Kdr kinase insert domain receptor ENCODES a protein that exhibits cadherin binding (ortholog); coreceptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenocarcinoma (ortholog); adhesions of uterus (ortholog); FOUND IN cell junction (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955447 15810816 15851702 + 102009775 AGCD01041070;GBBH01206639;GBDF01114733;XM_013518554 XP_013374008 MODEL 8862526 pseudo LOC102019485 protein FAM136A pseudogene NW_004955411 22835359 22835809 - 102019485 AGCD01012098;XM_005377789 MODEL 8721822 protein-coding Trim11 tripartite motif containing 11 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); negative regulation of AIM2 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955581 114750 123410 + 102013126 AGCD01075657;GBDF01080297;XM_005414233;XM_005414234 XP_005414290;XP_005414291 MODEL 39131648 rrna 5S_rRNA 5S ribosomal RNA 8966792 protein-coding Togaram2 TOG array regulator of axonemal microtubules 2 ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Hearing Loss (ortholog) NW_004955469 10860710 10910293 + 102016798 AGCD01052552;GBDI01259936;XM_005400540;XM_013522669 XP_005400597;XP_013378123 MODEL 39134263 misc_rna 7SK 7SK RNA 8993667 protein-coding Hipk3 homeodomain interacting protein kinase 3 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN mRNA transcription (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of JUN kinase activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955422 12841781 12928194 - 102022088 AGCD01022799;GBDF01002606;XM_005384160;XM_013513979 XP_005384217;XP_013369433 MODEL 8974748 protein-coding Gnl2 G protein nucleolar 2 PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog) NW_004955452 15376289 15401285 - 102012053 AGCD01044486;GBCQ01063721;XM_005395210 XP_005395267 MODEL 8956321 protein-coding Ewsr1 EWS RNA binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Ewing sarcoma (ortholog); Neoplastic Processes (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 3571025 3599975 + 102030274 AGCD01045636;GBDF01002227;XM_005396190;XM_005396191;XM_005396193 XP_005396247;XP_005396248;XP_005396250 MODEL 8861992 protein-coding Crot carnitine O-octanoyltransferase ENCODES a protein that exhibits carnitine O-octanoyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); coenzyme A metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN peroxisome (ortholog) NW_004955607 379121 413394 - 102004223 AGCD01076984;GBCQ01005137;GBDI01181966;XM_005414907;XM_013510115 XP_005414964;XP_013365569 MODEL 8960602 protein-coding Kbtbd13 kelch repeat and BTB domain containing 13 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); regulation of the force of skeletal muscle contraction (ortholog); relaxation of skeletal muscle (ortholog); ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); colorectal cancer (ortholog); genetic disease (ortholog) NW_004955450 10344020 10347686 - 102011714 AGCD01042613;GBCB01041383;XM_005393736 XP_005393793 MODEL 8945811 protein-coding Acta2 actin alpha 2, smooth muscle ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); glomerular mesangial cell development (ortholog); juxtaglomerular apparatus development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH aortic disease (ortholog); aortic dissection (ortholog); Breast Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); basement membrane (ortholog); cytoplasm (ortholog) NW_004955425 4023001 4039980 + 102019511 AGCD01025307;AGCD01025308;GBCQ01033579;XM_005385859 XP_005385916 MODEL 39131786 rrna 5S_rRNA 5S ribosomal RNA 8805579 protein-coding Cttnbp2 cortactin binding protein 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN regulation of modification of postsynaptic actin cytoskeleton (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Myocardial Ischemia (ortholog); prostate cancer (ortholog); FOUND IN dendritic spine (ortholog); FAR/SIN/STRIPAK complex (ortholog); glutamatergic synapse (ortholog) NW_004955432 23364193 23527300 - 102005956 AGCD01031283;AGCD01031284;AGCD01031285;AGCD01031286;GBDK01323978;XM_005388158 XP_005388215 MODEL 8768161 protein-coding Fam171a1 family with sequence similarity 171 member A1 INVOLVED IN regulation of cell shape (ortholog); stress fiber assembly (ortholog); FOUND IN plasma membrane (ortholog) NW_004955429 19184886 19241987 + 102030105 AGCD01028936;AGCD01028937;AGCD01028938;GBCB01077683;XM_013515488 XP_013370942 MODEL 8775480 protein-coding Tgm5 transglutaminase 5 ASSOCIATED WITH genetic disease (ortholog); peeling skin syndrome 1 (ortholog); peeling skin syndrome 2 (ortholog) NW_004955416 9808903 9842784 - 102030305 AGCD01017099;GBDI01211861;XM_005381369;XR_001233282 XP_005381426 MODEL 8837012 protein-coding LOC102020855 neutrophil gelatinase-associated lipocalin-like NW_004955570 431413 435267 + 102020855 AGCD01074725;GBDK01101143;XM_013509401 XP_013364855 MODEL 39133989 misc_rna 7SK 7SK RNA 8862766 protein-coding Trim13 tripartite motif containing 13 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin-like protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); innate immune response (ortholog); negative regulation of viral transcription (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); perinuclear endoplasmic reticulum (ortholog) NW_004955431 3324331 3395724 + 102028005 AGCD01029962;AGCD01029963;AGCD01029964;GBCE01111270;XM_005387600;XM_013515780 XP_005387657;XP_013371234 MODEL 8856175 ncrna LOC102014883 uncharacterized LOC102014883 NW_004955469 2962253 2964383 - 102014883 AGCD01052288;GBCE01151646;XR_263425 MODEL 8834922 protein-coding Dmpk DM1 protein kinase ENCODES a protein that exhibits ATP binding (ortholog); myosin phosphatase regulator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); muscle cell apoptotic process (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia 1 (ortholog); genetic disease (ortholog); Myotonia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955574 225615 237526 - 102020856 AGCD01075093;GBBH01011956;XM_005413811;XM_005413812;XM_005413813;XM_013509518;XM_013509519;XM_013509520;XM_013509521;XM_013509522;XM_013509523;XM_013509524;XM_013509525;XM_013509526 XP_005413868;XP_005413869;XP_005413870;XP_013364972;XP_013364973;XP_013364974;XP_013364975;XP_013364976;XP_013364977;XP_013364978;XP_013364979;XP_013364980 MODEL 39132453 snrna U6 U6 spliceosomal RNA 9061503 protein-coding Akain1 A-kinase anchor inhibitor 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of protein-containing complex assembly (ortholog); FOUND IN cytosol (ortholog) NW_004955402 5814876 5864612 + 102011257 AGCD01000142;AGCD01000143;XM_005372642 XP_005372699 MODEL 39133390 snrna U2 U2 spliceosomal RNA 8791941 protein-coding Serac1 serine active site containing 1 INVOLVED IN extracellular matrix organization (ortholog); intracellular cholesterol transport (ortholog); phosphatidylglycerol acyl-chain remodeling (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); Deafness (ortholog); dystonia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); extracellular matrix (ortholog) NW_004955439 4234440 4291947 + 102013761 AGCD01035706;AGCD01035707;AGCD01035708;GBBH01082146;XM_005390526 XP_005390583 MODEL 8925185 protein-coding Atp10d ATPase phospholipid transporting 10D (putative) ENCODES a protein that exhibits glycosylceramide flippase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) NW_004955443 972967 1072797 - 102027685 AGCD01038127;GBBH01114841;XM_005391891;XM_013518093 XP_005391948;XP_013373547 MODEL 10252126 protein-coding LOC106147052 janus kinase and microtubule-interacting protein 2-like NW_004955514 4087297 4102789 + 106147052 AGCD01067127;XM_013506748 XP_013362202 MODEL 8902221 protein-coding Insig1 insulin induced gene 1 ENCODES a protein that exhibits oxysterol binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to sterol (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); SREBP-SCAP-Insig complex (ortholog) NW_004955491 8333624 8344658 + 102005718 AGCD01060613;AGCD01060614;GBDF01005321;GBDF01005322;XM_005404901 XP_005404958 MODEL 39131787 rrna 5S_rRNA 5S ribosomal RNA 8717899 pseudo LOC102016704 40S ribosomal protein S10 pseudogene NW_004955416 8818949 8819438 + 102016704 AGCD01017070 MODEL 8811117 protein-coding LOC102006858 translationally-controlled tumor protein NW_004957308 14 1574 + 102006858 AGCD01080704;GBDI01329672;GBDJ01414259;XM_005415227 XP_005415284 MODEL 15036840 trna Trnar-gcg transfer RNA arginine (anticodon GCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978838 8845261 protein-coding LOC102022294 eukaryotic translation initiation factor 4B-like NW_004955483 1130768 1143285 - 102022294 AGCD01057644;GBDJ01001048;XM_005403314;XM_005403316;XM_013503771 XP_005403371;XP_005403373;XP_013359225 MODEL 8968185 ncrna LOC102010634 uncharacterized LOC102010634 NW_004955440 18844372 18859013 - 102010634 AGCD01036623;GBDF01150944;XR_262045 MODEL 39132572 rrna 5S_rRNA 5S ribosomal RNA 8810119 protein-coding Acss3 acyl-CoA synthetase short chain family member 3 ENCODES a protein that exhibits acetate-CoA ligase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); propionate-CoA ligase activity (ortholog); PARTICIPATES IN 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; fatty acid beta degradation pathway; malonic aciduria pathway; FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955405 19677191 19836086 + 102023866 AGCD01005043;AGCD01005044;AGCD01005045;AGCD01005046;AGCD01005047;GBCQ01000817;XM_005374371;XM_005374372;XM_013517967 XP_005374428;XP_005374429;XP_013373421 MODEL 10218799 ncrna LOC106150032 uncharacterized LOC106150032 NW_004955461 8986832 8989194 + 106150032 AGCD01048940;GBDF01075737;XR_001236570 MODEL 8905285 protein-coding LOC102019828 sperm motility kinase 2B-like NW_004955429 15038189 15055490 - 102019828 AGCD01028788;GBDJ01214873;XM_005387030;XM_013515521;XM_013515522;XM_013515523;XM_013515524;XM_013515525;XM_013515526;XM_013515527;XM_013515528;XM_013515529;XM_013515530;XM_013515531;XM_013515532;XM_013515533;XM_013515534;XM_013515535;XM_013515536;XM_013515537;XM_013515538 XP_005387087;XP_013370975;XP_013370976;XP_013370977;XP_013370978;XP_013370979;XP_013370980;XP_013370981;XP_013370982;XP_013370983;XP_013370984;XP_013370985;XP_013370986;XP_013370987;XP_013370988;XP_013370989;XP_013370990;XP_013370991;XP_013370992 MODEL 8897190 protein-coding Gatad2a GATA zinc finger domain containing 2A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN anterior neuropore closure (ortholog); blood vessel development (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH Genetic Predisposition to Disease (ortholog); Neurodevelopmental Disorders (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); NuRD complex (ortholog) NW_004955524 2439594 2506539 - 102012356 AGCD01068818;GBCE01076477;XM_005409631;XM_005409632;XM_005409634;XM_005409636;XM_013507292;XM_013507293;XM_013507294;XM_013507295 XP_005409688;XP_005409689;XP_005409691;XP_005409693;XP_013362746;XP_013362747;XP_013362748;XP_013362749 MODEL 8702571 protein-coding LOC102021276 disintegrin and metalloproteinase domain-containing protein 5-like NW_004955536 3528401 3648035 - 102021276 AGCD01070827;AGCD01070828;AGCD01070829;AGCD01070830;GBDF01008700;XM_005410548;XM_005410549;XM_013507719;XM_013507720 XP_005410605;XP_005410606;XP_013363173;XP_013363174 MODEL 8897228 protein-coding Pla2g4b phospholipase A2 group IVB ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylethanolamine acyl-chain remodeling (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; alpha-linolenic acid metabolic pathway; antipyrine drug pathway; ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955416 8633249 8643219 + 102014353 AGCD01017064;GBDI01327602;XM_013512524 XP_013367978 MODEL 8861735 pseudo LOC102019486 glycolipid transfer protein-like NW_004955464 11913275 11914481 - 102019486 AGCD01050168 MODEL 8983144 pseudo LOC102017129 arylacetamide deacetylase-like 4 NW_004955486 847089 892899 - 102017129 AGCD01058896;AGCD01058897;AGCD01058898;AGCD01058899;AGCD01058900;AGCD01058901;AGCD01058902;AGCD01058903;AGCD01058904 MODEL 39131649 rrna 5S_rRNA 5S ribosomal RNA 39131489 protein-coding AKAIN1 A-kinase anchor inhibitor 1 8787567 protein-coding Vwa5a von Willebrand factor A domain containing 5A FOUND IN nucleoplasm (ortholog) NW_004955412 24850301 24874498 + 102003105 AGCD01013130;GBBH01115484;XM_005378408;XM_005378409 XP_005378465;XP_005378466 MODEL 39134264 misc_rna 7SK 7SK RNA 8864924 protein-coding Psmc1 proteasome 26S subunit, ATPase 1 ENCODES a protein that exhibits TBP-class protein binding (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH neurodevelopmental disorder with poor growth, spastic tetraplegia, and hearing loss (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) NW_004955438 12705328 12721050 + 102012685 AGCD01035267;GBDF01004856;XM_005390281 XP_005390338 MODEL 8769388 pseudo LOC102024011 ubiquitin-conjugating enzyme E2 D3 pseudogene NW_004955484 2154271 2155118 - 102024011 AGCD01058092 MODEL 8958449 protein-coding LOC102009864 olfactory receptor 4D11-like NW_004955511 3981204 3982139 + 102009864 AGCD01066484;XM_005408268 XP_005408325 MODEL 9027470 protein-coding LOC102017883 zinc finger protein 75D NW_004955489 9388240 9400320 + 102017883 AGCD01060038;AGCD01060039;GBCE01139029;XM_005404607;XM_013504455 XP_005404664;XP_013359909 MODEL 8740972 protein-coding Cfap263 cilia and flagella associated protein 263 INVOLVED IN cilium assembly (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); protein-containing complex (ortholog) NW_004955433 15750921 15775466 + 102011576 AGCD01031764;AGCD01031765;GBDF01190993;XM_005388436;XM_005388437;XM_013516275 XP_005388493;XP_005388494;XP_013371729 MODEL 8774048 protein-coding Tgm6 transglutaminase 6 ENCODES a protein that exhibits protein-glutamine gamma-glutamyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant cerebellar ataxia (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) NW_004955415 13470268 13499500 + 102014664 AGCD01016250;AGCD01016251;GBDF01128911;XM_005380751 XP_005380808 MODEL 8809840 ncrna LOC102012234 uncharacterized LOC102012234 NW_004955433 7547240 7568531 + 102012234 AGCD01031573;GBDF01235477;XR_001234708;XR_001234709;XR_001234710 MODEL 8832071 trna Trnar-ucg transfer RNA arginine (anticodon UCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955483;NW_004955416;NW_004955553;NW_004955553 745122;769025;15772231;1885684;1885407 745194;769097;15772303;1885756;1885479 -;-;-;+;- 101978837 AGCD01017343;AGCD01057629;AGCD01057630;AGCD01072903 MODEL 8809986 protein-coding Capn10 calpain 10 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cellular response to insulin stimulus (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955542 874083 885085 - 102015768 AGCD01071481;GBDF01159703;XM_005411155;XM_013508102 XP_005411212;XP_013363556 MODEL 8876766 protein-coding LOC102022296 cocaine esterase-like NW_004955484 9769745 9781227 - 102022296 AGCD01058429;AGCD01058430;GBDF01020524;XM_013503865 XP_013359319 MODEL 39133392 snrna U2 U2 spliceosomal RNA 9062204 protein-coding Kdsr 3-ketodihydrosphingosine reductase ENCODES a protein that exhibits 3-dehydrosphinganine reductase activity (ortholog); INVOLVED IN 3-keto-sphinganine metabolic process (ortholog); ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH erythrokeratodermia variabilis et progressiva 4 (ortholog); follicular lymphoma (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955402 47092779 47130131 - 102009132 AGCD01001171;AGCD01001172;GBCQ01072862;GBDF01003787;XM_013511228 XP_013366682 MODEL 8725972 ncrna LOC102005075 uncharacterized LOC102005075 NW_004955433 12925114 12937990 - 102005075 AGCD01031673;XR_261590 MODEL 8858591 protein-coding Bcorl1 BCL6 corepressor like 1 ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Developmental Disabilities (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955473 4990974 5054829 - 102010992 AGCD01053963;AGCD01053964;GBCQ01012577;XM_005401251;XM_005401252;XM_005401253;XM_013523072;XM_013523073;XM_013523074;XM_013523075 XP_005401308;XP_005401309;XP_005401310;XP_013378526;XP_013378527;XP_013378528;XP_013378529 MODEL 8711048 protein-coding Tollip toll interacting protein ENCODES a protein that exhibits interleukin-1, type I receptor binding (ortholog); kinase binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); interleukin-1-mediated signaling pathway (ortholog); phosphorylation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); COVID-19 (ortholog); idiopathic pulmonary fibrosis (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955476 10987223 11009134 + 102004475 AGCD01055434;AGCD01055435;GBDF01003680;XM_005401793 XP_005401850 MODEL 8979037 protein-coding Actb actin beta ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); apical protein localization (ortholog); axonogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; INO80 family mediated chromatin remodeling pathway; mitochondria transport pathway; ASSOCIATED WITH Aminoacylase 1 Deficiency (ortholog); Animal Mammary Neoplasms (ortholog); Baraitser-Winter syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical junction complex (ortholog) NW_004955460 10358100 10361585 - 102030392 AGCD01048580;AGCD01048581;DQ826531;GBDJ01017709;XM_005397842 ABI22175;XP_005397899 MODEL 8861375 protein-coding Kbtbd2 kelch repeat and BTB domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN gene expression (ortholog); glucose metabolic process (ortholog); lipid metabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955617 137854 157801 - 102006853 AGCD01077270;GBDJ01337619;XM_005414989;XM_005414990;XM_005414991;XM_013510146 XP_005415046;XP_005415047;XP_005415048;XP_013365600 MODEL 39131650 rrna 5S_rRNA 5S ribosomal RNA 9018250 protein-coding LOC102021279 AFG3-like protein 1 NW_004955541 3433520 3460695 + 102021279 AGCD01071448;AGCD01071449;GBDF01049325;XM_013507965 XP_013363419 MODEL 39134265 misc_rna 7SK 7SK RNA 8715454 protein-coding Akap1 A-kinase anchoring protein 1 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); apoptotic process (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); obesity (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); mitochondrial crista (ortholog) NW_004955451 5756648 5787617 - 102010655 AGCD01043175;AGCD01043176;GBCE01114894;XM_005394060;XM_013519400;XM_013519401;XM_013519402 XP_005394117;XP_013374854;XP_013374855;XP_013374856 MODEL 8968387 ncrna LOC102020858 uncharacterized LOC102020858 NW_004955583 813195 820896 - 102020858 AGCD01075866;GBDI01384318;XR_001232503;XR_001232504;XR_001232505;XR_265098 MODEL 39133990 misc_rna 7SK 7SK RNA 39131788 rrna 5S_rRNA 5S ribosomal RNA 39132454 snrna U6 U6 spliceosomal RNA 8714125 protein-coding LOC102014885 olfactory receptor 56A3 NW_004955414 21818642 21819592 + 102014885 AGCD01015433;XM_005380115 XP_005380172 MODEL 9033538 protein-coding Ap2a1 adaptor related protein complex 2 subunit alpha 1 ENCODES a protein that exhibits low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of hyaluronan biosynthetic process (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; FOUND IN AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955559 1117380 1143403 - 102030354 AGCD01073630;GBDF01003430;XM_005412825;XM_005412826;XM_013509046;XM_013509047 XP_005412882;XP_005412883;XP_013364500;XP_013364501 MODEL 8739725 protein-coding Dusp4 dual specificity phosphatase 4 ENCODES a protein that exhibits MAP kinase serine/threonine phosphatase activity (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955463 5778945 5794282 - 102021217 AGCD01049644;GBCE01111467;XM_005398363 XP_005398420 MODEL 8939467 protein-coding Actbl2 actin beta like 2 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) NW_004955446 10508647 10509777 + 102010645 AGCD01040183;XM_005392677;XM_005392678 XP_005392734;XP_005392735 MODEL 8949342 pseudo LOC102009866 U2 small nuclear ribonucleoprotein B'' pseudogene NW_004955512 1307791 1314557 + 102009866 AGCD01066638 MODEL 8952791 protein-coding Hipk4 homeodomain interacting protein kinase 4 ENCODES a protein that exhibits histone kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); protein autophosphorylation (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955578 876022 884098 + 102014841 AGCD01075500;GBDF01043196;XM_005414055;XM_005414056 XP_005414112;XP_005414113 MODEL 8830044 protein-coding Fgf16 fibroblast growth factor 16 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of brown fat cell proliferation (ortholog); positive regulation of endothelial cell chemotaxis to fibroblast growth factor (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); syndactyly type 8 (ortholog) NW_004955557 906361 915590 + 102018534 AGCD01073267;GBCB01017510;XM_005412621 XP_005412678 MODEL 9011212 protein-coding Serbp1 SERPINE1 mRNA binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); PML body organization (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955423 23763356 23774816 + 102015645 AGCD01024017;GBBH01001652;GBCE01000542;XM_005385275;XM_013514510;XM_013514511;XM_013514512 XP_005385332;XP_013369964;XP_013369965;XP_013369966 MODEL 8834264 protein-coding LOC102003349 uncharacterized LOC102003349 NW_004955420 23430746 23448623 - 102003349 AGCD01021246;AGCD01021247;AGCD01021248;GBDJ01304436;XM_005383606 XP_005383663 MODEL 8835185 protein-coding Azin2 antizyme inhibitor 2 The protein encoded by this gene belongs to the antizyme inhibitor family, which plays a role in cell growth and proliferation by maintaining polyamine homeostasis within the cell. Antizyme inhibitors are homologs of ornithine decarboxylase (ODC, the key enzyme in polyamine biosynthesis) that have lost the ability to decarboxylase ornithine; however, retain the ability to bind to antizymes. Antizymes negatively regulate intracellular polyamine levels by binding to ODC and targeting it for degradation, as well as by inhibiting polyamine uptake. Antizyme inhibitors function as positive regulators of polyamine levels by sequestering antizymes and neutralizing their effect. This gene encodes antizyme inhibitor 2, the second member of this gene family. Like antizyme inhibitor 1, antizyme inhibitor 2 interacts with all 3 antizymes and stimulates ODC activity and polyamine uptake. However, unlike antizyme inhibitor 1, which is ubiquitously expressed and localized in the nucleus and cytoplasm, antizyme inhibitor 2 is predominantly expressed in the brain and testis and localized in the endoplasmic reticulum-golgi intermediate compartment. Recent studies indicate that antizyme inhibitor 2 is also expressed in specific cell types in ovaries, adrenal glands and pancreas, and in mast cells. The exact function of this gene is not known, however, available data suggest its role in cell growth, spermiogenesis, vesicular trafficking and secretion. There has been confusion in literature and databases over the nomenclature of this gene, stemming from an earlier report that a human cDNA clone (identical to ODCp/AZIN2) had arginine decarboxylase (ADC) activity (PMID:14738999). Subsequent studies in human and mouse showed that antizyme inhibitor 2 was devoid of arginine decarboxylase activity (PMID:19956990). [provided by RefSeq, Sep 2014] NW_004955452 11304345 11330370 + 102006306 AGCD01044334;AGCD01044335;GBDF01009198;GBDK01263680;NM_001293750;XM_013519440;XM_013519441 NP_001280679;XP_013374894;XP_013374895 REVIEWED 10320437 protein-coding Fam171a2 family with sequence similarity 171 member A2 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 17372032 17376329 - 106149663 AGCD01043745;AGCD01043746;GBDF01127622;GBDK01040818;XM_013519262 XP_013374716 MODEL 8881541 protein-coding Txnrd3 thioredoxin reductase 3 ENCODES a protein that exhibits thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN blastocyst formation (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); colorectal adenoma (ortholog); colorectal carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955429 16845466 16880481 + 102022949 AGCD01028839;GBCE01069985;GBDI01384403;XM_005387260 XP_005387317 MODEL 8994240 ncrna LOC102017137 uncharacterized LOC102017137 NW_004955423 5582136 5583107 + 102017137 AGCD01023564;GBDF01189480;XR_260955 MODEL 8948477 protein-coding Cttnbp2nl CTTNBP2 N-terminal like ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); INVOLVED IN negative regulation of transmembrane transport (ortholog); negative regulation of transporter activity (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); FAR/SIN/STRIPAK complex (ortholog) NW_004955435 15858056 15910486 + 102030233 AGCD01033287;AGCD01033288;AGCD01033289;GBCQ01153403;XM_005388955;XM_005388956;XM_005388957 XP_005389012;XP_005389013;XP_005389014 MODEL 8933051 protein-coding Arrdc5 arrestin domain containing 5 INVOLVED IN spermatogenesis (ortholog); FOUND IN membrane (ortholog) NW_004955495 4161144 4166968 + 102030436 AGCD01061898;AGCD01061899;GBDF01000032;XM_005405775 XP_005405832 MODEL 9034186 protein-coding Insig2 insulin induced gene 2 ENCODES a protein that exhibits oxysterol binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol metabolic process (ortholog); cranial suture morphogenesis (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH end stage renal disease (ortholog); Experimental Liver Cirrhosis (ortholog); Hypertriglyceridemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); SREBP-SCAP-Insig complex (ortholog) NW_004955459 11571582 11596069 - 102025440 AGCD01048233;GBDF01213828;XM_005397686;XM_005397687;XM_013521090 XP_005397743;XP_005397744;XP_013376544 MODEL 9043884 protein-coding Dmrt1 doublesex and mab-3 related transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell morphogenesis (ortholog); developmental process involved in reproduction (ortholog); germ cell migration (ortholog); ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,XY sex reversal 4 (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955434 5341519 5448049 + 102014704 AGCD01032188;AGCD01032189;GBDF01118169;XM_005388599;XM_013516377 XP_005388656;XP_013371831 MODEL 8791365 protein-coding Trim14 tripartite motif containing 14 ENCODES a protein that exhibits molecular adaptor activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN inflammatory response (ortholog); innate immune response (ortholog); negative regulation of viral transcription (ortholog); FOUND IN cytoplasm (ortholog) NW_004955419 27390098 27420727 + 102019701 AGCD01020432;AGCD01020433;AGCD01020434;GBBH01036750;GBDI01107401;XM_013513283 XP_013368737 MODEL 8853421 pseudo LOC102010635 ubiquitin carboxyl-terminal hydrolase 48-like NW_004955441 3586283 3611712 + 102010635 AGCD01036808;AGCD01036809;AGCD01036810;AGCD01036811;AGCD01036812;AGCD01036813 MODEL 10112153 ncrna LOC106150033 uncharacterized LOC106150033 NW_004955461 9108773 9114933 + 106150033 AGCD01048940;AGCD01048941;GBDF01209602;XR_001236571;XR_001236572 MODEL 8752645 protein-coding Cfap276 cilia and flagella associated protein 276 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease intermediate type (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) NW_004955435 12522502 12530699 - 102024043 AGCD01033149;GBBH01007083;XM_005388846 XP_005388903 MODEL 8732362 protein-coding LOC102019830 membrane-spanning 4-domains subfamily A member 4A-like NW_004955511 4899748 4924827 - 102019830 AGCD01066538;AGCD01066539;GBCE01044600;XM_005408080 XP_005408137 MODEL 8963342 protein-coding Atp11a ATPase phospholipid transporting 11A ENCODES a protein that exhibits phosphatidylethanolamine flippase activity (ortholog); phosphatidylserine flippase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); positive regulation of myotube differentiation (ortholog); regulation of membrane lipid distribution (ortholog); ASSOCIATED WITH Autosomal Dominant Auditory Neuropathy 2 (ortholog); autosomal dominant nonsyndromic deafness 33 (ortholog); autosomal dominant nonsyndromic deafness 84 (ortholog); FOUND IN endoplasmic reticulum (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) NW_004955404 820788 906531 - 102011941 AGCD01003212;AGCD01003213;AGCD01003214;GBCE01029356;XM_013515626;XM_013515632;XM_013515639;XM_013515641;XM_013515652;XM_013515654;XM_013515661;XM_013515663;XM_013515667;XR_001234554;XR_001234555 XP_013371080;XP_013371086;XP_013371093;XP_013371095;XP_013371106;XP_013371108;XP_013371115;XP_013371117;XP_013371121 MODEL 8767205 ncrna LOC102019487 uncharacterized LOC102019487 NW_004955412 6217988 6251126 + 102019487 AGCD01012668;AGCD01012669;GBDF01075391;XR_001232893;XR_001232894;XR_259979 MODEL 8820121 protein-coding Tgm7 transglutaminase 7 NW_004955416 9847645 9870627 - 102003124 AGCD01017099;GBCQ01191296;XM_005381371 XP_005381428 MODEL 8953020 protein-coding LOC102022297 arylacetamide deacetylase-like 4 NW_004955486 1253339 1293734 - 102022297 AGCD01058938;AGCD01058939;XM_005403944;XM_013504152 XP_005404001;XP_013359606 MODEL 9055151 ncrna LOC102016711 uncharacterized LOC102016711 NW_004955482 6769911 6774867 - 102016711 AGCD01057416;GBCB01098409;XR_001230985;XR_263843;XR_263844 MODEL 8713180 pseudo LOC102005852 60S ribosomal protein L21 pseudogene NW_004955565 1247877 1249322 - 102005852 AGCD01074307 MODEL 8992611 protein-coding Vwa5b1 von Willebrand factor A domain containing 5B1 NW_004955452 874819 938134 + 102018677 AGCD01043828;GBDK01400521;XM_005394679;XM_013519734;XM_013519735 XP_005394736;XP_013375188;XP_013375189 MODEL 9039473 ncrna LOC102006859 uncharacterized LOC102006859 NW_004955451 17177722 17181204 - 102006859 AGCD01043726;AGCD01043727;XR_262622 MODEL 39131651 rrna 5S_rRNA 5S ribosomal RNA 8847820 protein-coding Fam171b family with sequence similarity 171 member B FOUND IN synapse (ortholog) NW_004955403 11512731 11532550 - 102027708 AGCD01001955;GBCE01021685;GBDJ01372724;XM_013512412;XM_013512415 XP_013367866;XP_013367869 MODEL 39132574 rrna 5S_rRNA 5S ribosomal RNA 8987744 ncrna LOC102017885 uncharacterized LOC102017885 NW_004955422 15698420 15702889 - 102017885 AGCD01022881;GBDF01159222;XR_001233961;XR_001233962;XR_001233963;XR_001233964 MODEL 8864397 protein-coding Gnl3 G protein nucleolar 3 ENCODES a protein that exhibits GTP binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN positive regulation of miRNA transcription (ortholog); positive regulation of protein localization to chromosome, telomeric region (ortholog); positive regulation of protein sumoylation (ortholog); FOUND IN chromosome (ortholog); nuclear body (ortholog); nucleolus (ortholog) NW_004955430 2675477 2678113 + 102024599 AGCD01029173;AGCD01029174;GBDJ01230820;GBDJ01230840;XM_013515591 XP_013371045 MODEL 8785449 protein-coding Kbtbd3 kelch repeat and BTB domain containing 3 NW_004955412 8703075 8723628 - 102026199 AGCD01012721;AGCD01012722;GBDK01170541;XM_005378014;XM_005378015;XM_005378016;XM_005378017;XM_005378018;XM_005378019;XM_013511193;XM_013511194;XM_013511195;XM_013511196 XP_005378071;XP_005378072;XP_005378073;XP_005378074;XP_005378075;XP_005378076;XP_013366647;XP_013366648;XP_013366649;XP_013366650 MODEL 8844796 protein-coding Haus7 HAUS augmin like complex subunit 7 ENCODES a protein that exhibits thioesterase binding (ortholog); INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) NW_004955580 210799 230450 - 102009776 AGCD01075591;AGCD01075592;GBDJ01388638;XM_005414116;XM_013509715 XP_005414173;XP_013365169 MODEL 8812028 pseudo LOC102012238 ras GTPase-activating protein-binding protein 2 pseudogene NW_004955526 2838596 2839845 + 102012238 AGCD01069322 MODEL 8721098 protein-coding Pla2g4c phospholipase A2 group IVC ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); O-acyltransferase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); lipid droplet formation (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); FOUND IN cell cortex (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955609 182706 212102 + 102010967 AGCD01077053;AGCD01077054;GBDJ01028499;XM_013510120 XP_013365574 MODEL 8820487 protein-coding LOC102014886 uncharacterized LOC102014886 NW_004955470 164918 176487 + 102014886 AGCD01052603;AGCD01052604;GBDJ01018205;XM_005400817 XP_005400874 MODEL 8876912 trna Trnar-ucu transfer RNA arginine (anticodon UCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955423;NW_004955511;NW_004955465;NW_004955468;NW_004955467 841104;4044405;13275754;10939794;8841103 841188;4044489;13275843;10939867;8841189 -;+;+;-;- 101978839 AGCD01023421;AGCD01050596;AGCD01051475;AGCD01052109;AGCD01066488 MODEL 8743704 protein-coding Capn11 calpain 11 FOUND IN acrosomal vesicle (ortholog) NW_004955437 9791021 9804769 + 102016847 AGCD01034543;GBDF01000703;XM_005389797;XM_005389798;XM_005389799;XM_005389800;XM_005389801;XM_005389802 XP_005389854;XP_005389855;XP_005389856;XP_005389857;XP_005389858;XP_005389859 MODEL 10239047 protein-coding LOC106147053 uncharacterized LOC106147053 NW_004955514 4105400 4112478 + 106147053 AGCD01067127;GBDF01057017;XM_013506749 XP_013362203 MODEL 8928062 protein-coding Dusp5 dual specificity phosphatase 5 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of vasoconstriction (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Brain Injuries (ortholog); Cardiac Fibrosis (ortholog) NW_004955485 914250 927640 - 102016273 AGCD01058466;AGCD01058467;GBBH01223883;GBDF01144994;XM_013504121 XP_013359575 MODEL 9011843 protein-coding Psmc2 proteasome 26S subunit, ATPase 2 ENCODES a protein that exhibits general transcription initiation factor binding (ortholog); proteasome-activating activity (ortholog); TBP-class protein binding (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); P-body (ortholog) NW_004955410 8341218 8355515 + 102016988 AGCD01010744;GBDF01009573;XM_005377230 XP_005377287 MODEL 8830199 pseudo LOC102024014 arginine--tRNA ligase, cytoplasmic pseudogene NW_004955421 2200401 2202377 - 102024014 AGCD01021620 MODEL 8901153 protein-coding LOC102003352 inositol 1,4,5-trisphosphate receptor type 1 NW_004955421 8603264 8928051 - 102003352 AGCD01021821;AGCD01021822;AGCD01021823;AGCD01021824;AGCD01021825;AGCD01021826;GBCE01055382;GBDF01285678;XM_013513709;XM_013513710;XM_013513711;XM_013513712;XM_013513713;XM_013513714;XM_013513715 XP_013369163;XP_013369164;XP_013369165;XP_013369166;XP_013369167;XP_013369168;XP_013369169 MODEL 8991054 protein-coding B2m beta-2-microglobulin ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); structural molecule activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class Ib (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular space; external side of plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955416 11205503 11211325 + 102017868 AGCD01017180;AGCD01017181;GBDK01013792;XM_005381424 XP_005381481 MODEL 8915953 protein-coding Tom1 target of myb1 membrane trafficking protein ENCODES a protein that exhibits clathrin binding (ortholog); clathrin heavy chain binding (ortholog); myosin VI binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); endosomal transport (ortholog); positive regulation of autophagosome maturation (ortholog); ASSOCIATED WITH immunodeficiency 85 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955405 43091632 43115016 + 102007620 AGCD01005599;GBDF01043198;XM_005374661;XM_013519245 XP_005374718;XP_013374699 MODEL 8761052 protein-coding Tyk2 tyrosine kinase 2 ENCODES a protein that exhibits growth hormone receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-10-mediated signaling pathway (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; Interleukin-10 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Cocaine-Related Disorders (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955495 1618099 1637996 - 102004082 AGCD01061706;AGCD01061707;AGCD01061708;GBDJ01227777;XM_005405593;XM_013505151;XM_013505152;XM_013505153;XM_013505154;XM_013505155;XM_013505156;XM_013505157;XM_013505158;XM_013505159 XP_005405650;XP_013360605;XP_013360606;XP_013360607;XP_013360608;XP_013360609;XP_013360610;XP_013360611;XP_013360612;XP_013360613 MODEL 39133991 misc_rna 7SK 7SK RNA 39132456 snrna U6 U6 spliceosomal RNA 8816520 protein-coding Akap10 A-kinase anchoring protein 10 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Heart Block (ortholog); sudden infant death syndrome (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955467 919207 990753 - 102008609 AGCD01051242;AGCD01051243;AGCD01051244;GBDI01297241;XM_005399292;XM_013522190 XP_005399349;XP_013377644 MODEL 39131789 rrna 5S_rRNA 5S ribosomal RNA 9009932 protein-coding Gatad2b GATA zinc finger domain containing 2B INVOLVED IN chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); GAND syndrome (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 424997 519031 - 102021177 AGCD01071793;AGCD01071794;AGCD01071795;AGCD01071796;AGCD01071797;AGCD01071798;GBDI01293510;XM_005411445;XM_005411446;XM_005411447;XM_005411448;XM_013508226;XM_013508227 XP_005411502;XP_005411503;XP_005411504;XP_005411505;XP_013363680;XP_013363681 MODEL 39131392 protein-coding DMRT2 doublesex and mab-3 related transcription factor 2 8996406 pseudo LOC102009870 deoxycytidine kinase-like NW_004955435 5992632 5993789 - 102009870 AGCD01032903 MODEL 8805524 protein-coding Trim15 tripartite motif containing 15 ENCODES a protein that exhibits molecular sequestering activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of intracellular transport of viral material (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN nucleus (ortholog) NW_004955583 277564 283422 + 102029919 AGCD01075808;XM_013509792 XP_013365246 MODEL 9026041 protein-coding Hirip3 HIRA interacting protein 3 ENCODES a protein that exhibits H2A-H2B histone complex chaperone activity (ortholog); INVOLVED IN chromatin organization (ortholog); ASSOCIATED WITH spondylocostal dysostosis 5 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955493 6964576 6967234 + 102026438 AGCD01061152;GBDF01051809;XM_005405202 XP_005405259 MODEL 9046568 protein-coding Keap1 kelch like ECH associated protein 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cellular response to carbohydrate stimulus (ortholog); cellular response to interleukin-4 (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); amyotrophic lateral sclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); Cul3-RING ubiquitin ligase complex (ortholog) NW_004955495 1704695 1711339 - 102006474 AGCD01061712;GBBH01001242;GBDK01022727;XM_013505131 XP_013360585 MODEL 8754244 protein-coding Cfap298 cilia and flagella associated protein 298 INVOLVED IN cilium assembly (ortholog); regulation of cilium movement (ortholog); ASSOCIATED WITH primary ciliary dyskinesia 26 (ortholog); FOUND IN cytosol (ortholog) NW_004955407 32076670 32089307 - 102016780 AGCD01007669;GBDF01010732;XM_005375670;XM_013504205 XP_005375727;XP_013359659 MODEL 8906537 protein-coding LOC102017138 olfactory receptor 19-like NW_004955495 8523068 8523988 - 102017138 AGCD01062213;XM_013505149 XP_013360603 MODEL 9028860 protein-coding Serf2 small EDRK-rich factor 2 INVOLVED IN protein destabilization (ortholog) NW_004955416 10251533 10252429 + 102012642 AGCD01017126;GBCB01007574;GBDF01001580;XM_005381409 XP_005381466 MODEL 9007700 protein-coding Tgoln2 trans-golgi network protein 2 ASSOCIATED WITH Myocardial Ischemia (ortholog); thyroid gland disease (ortholog); FOUND IN endosome (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955424 2122410 2131734 - 102006477 AGCD01024263;GBCQ01005356;XM_013514587 XP_013370041 MODEL 39134266 misc_rna 7SK 7SK RNA 8841831 protein-coding Bcr BCR activator of RhoGEF and GTPase ENCODES a protein that exhibits enzyme binding (ortholog); GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); brain development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); Blast Crisis (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955455 7598794 7727386 + 102026502 AGCD01045862;GBDF01188592;GBDI01355626;XM_005396371 XP_005396428 MODEL 8899037 protein-coding Arsa arylsulfatase A ENCODES a protein that exhibits arylsulfatase activity (ortholog); calcium ion binding (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN autophagy (ortholog); binding of sperm to zona pellucida (ortholog); response to estrogen (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Autosomal Sideroblastic Anemia (ortholog); citrullinemia (ortholog); frontotemporal dementia (ortholog); FOUND IN acrosomal vesicle (ortholog); endosome (ortholog); extracellular space (ortholog) NW_004955413 33624460 33629491 - 102008522 AGCD01014683;GBDK01093821;XM_005379595;XM_005379596;XM_013511654 XP_005379652;XP_005379653;XP_013367108 MODEL 8931274 protein-coding LOC102021280 serpin A11 NW_004955438 17885184 17897498 + 102021280 AGCD01035456;GBDJ01284370;XM_005390392 XP_005390449 MODEL 9010883 protein-coding Tspyl5 TSPY like 5 INVOLVED IN cellular response to gamma radiation (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog) NW_004955417 13133655 13136768 - 102008102 AGCD01018171;XM_005381841 XP_005381898 MODEL 9057733 protein-coding LOC102005856 cytochrome P450 3A9-like NW_004955573 976002 1018678 - 102005856 AGCD01075011;AGCD01075012;AGCD01075013;GBCQ01036396;XM_005413764;XM_013509445 XP_005413821;XP_013364899 MODEL 39131652 rrna 5S_rRNA 5S ribosomal RNA 39133394 snrna U2 U2 spliceosomal RNA 8723771 protein-coding Actc1 actin alpha cardiac muscle 1 ENCODES a protein that exhibits ATP binding (ortholog); microfilament motor activity (ortholog); myosin binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); actin-myosin filament sliding (ortholog); actomyosin structure organization (ortholog); ASSOCIATED WITH atrial heart septal defect 5 (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955416 2139541 2144678 - 102028962 AGCD01016849;GBDI01008524;XM_005381179 XP_005381236 MODEL 8766313 ncrna LOC102010640 uncharacterized LOC102010640 NW_004955556 1708260 1721389 - 102010640 AGCD01073200;GBBH01223895;XR_264978 MODEL 8955093 ncrna LOC102005078 uncharacterized LOC102005078 NW_004955526 2723249 2727334 - 102005078 AGCD01069312;GBCQ01078069;XR_264658 MODEL 9002789 protein-coding Fgf17 fibroblast growth factor 17 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH hypogonadotropic hypogonadism 20 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog) NW_004955403 45544114 45548659 + 102030262 AGCD01002820;GBDF01213823;XM_005373644;XM_005373645 XP_005373701;XP_005373702 MODEL 15036853 trna Trnas-acu transfer RNA serine (anticodon ACU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978841 8868124 ncrna LOC102020860 uncharacterized LOC102020860 NW_004955449 714123 720440 - 102020860 AGCD01041771;GBDF01000343;XR_001235819 MODEL 8800952 protein-coding Gatb glutamyl-tRNA amidotransferase subunit B ENCODES a protein that exhibits glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 41 (ortholog); Mitochondrial Cardiomyopathy (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) NW_004955471 6230027 6313655 - 102024896 AGCD01053122;AGCD01053123;GBCB01056706;XM_005400896 XP_005400953 MODEL 9003451 protein-coding Atp11b ATPase phospholipid transporting 11B (putative) FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955420 11588739 11681636 + 102024912 AGCD01020824;AGCD01020825;AGCD01020826;AGCD01020827;GBDF01046603;GBDF01046604;XM_013513429;XM_013513430;XM_013513431;XM_013513432;XM_013513433;XM_013513434;XM_013513435;XM_013513436 XP_013368883;XP_013368884;XP_013368885;XP_013368886;XP_013368887;XP_013368888;XP_013368889;XP_013368890 MODEL 8940395 protein-coding LOC102019488 dehydrogenase/reductase SDR family member 7-like NW_004955466 9449071 9476610 + 102019488 AGCD01051041;GBCQ01037453;XM_005399182 XP_005399239 MODEL 9050174 protein-coding Adgrg5 adhesion G protein-coupled receptor G5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955433 15156116 15209824 + 102030113 AGCD01031746;AGCD01031747;AGCD01031748;GBDI01290202;XM_005388400;XM_005388401;XM_013516255;XM_013516256 XP_005388457;XP_005388458;XP_013371709;XP_013371710 MODEL 9005084 pseudo LOC102022299 protein odr-4 homolog NW_004955488 3218892 3220365 - 102022299 AGCD01059571 MODEL 8979142 ncrna LOC102006863 uncharacterized LOC102006863 NW_004955452 9730790 9732267 + 102006863 AGCD01044258;GBDF01076687;XR_001236011;XR_001236012;XR_262671 MODEL 39132458 snrna U6 U6 spliceosomal RNA 8814689 protein-coding Fam174a family with sequence similarity 174 member A ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) NW_004955418 12877465 12912096 - 102026640 AGCD01019033;AGCD01019034;GBBH01142848;XM_013513060 XP_013368514 MODEL 8716075 protein-coding B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH NOR POLYAGGLUTINATION SYNDROME (ortholog) NW_004955448 11556179 11583556 - 102006843 AGCD01041528;GBCB01129821;GBCE01169869;XM_005393126;XM_005393128;XM_013518678;XM_013518679;XM_013518680 XP_005393183;XP_005393185;XP_013374132;XP_013374133;XP_013374134 MODEL 9014452 protein-coding Psmc3 proteasome 26S subunit, ATPase 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst development (ortholog); host-mediated perturbation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cataract (ortholog); DEAFNESS, CATARACT, IMPAIRED INTELLECTUAL DEVELOPMENT, AND POLYNEUROPATHY (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog); P-body (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955422 837934 843161 + 102021984 AGCD01022437;GBDF01010552;XM_005383972 XP_005384029 MODEL 8721672 protein-coding Ap2a2 adaptor related protein complex 2 subunit alpha 2 ENCODES a protein that exhibits disordered domain specific binding (ortholog); kinase binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; FOUND IN AP-2 adaptor complex (ortholog); cytoplasmic vesicle (ortholog); membrane coat (ortholog) NW_004955476 11184944 11229385 - 102005465 AGCD01055443;AGCD01055444;GBCQ01002043;XM_005401795 XP_005401852 MODEL 9011313 protein-coding Tom1l1 target of myb1 like 1 membrane trafficking protein ENCODES a protein that exhibits clathrin binding (ortholog); protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); negative regulation of mitotic nuclear division (ortholog); positive regulation of protein autophosphorylation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome (ortholog) NW_004955451 7642679 7690957 - 102019129 AGCD01043243;AGCD01043244;GBDI01175373;GBDI01175374;XM_013519382 XP_013374836 MODEL 10197946 ncrna LOC106150034 uncharacterized LOC106150034 NW_004955461 1659213 1706221 + 106150034 AGCD01048819;AGCD01048820;GBDF01116645;XR_001236573 MODEL 8995928 pseudo LOC102017887 small nuclear ribonucleoprotein Sm D2 pseudogene NW_004955422 19113364 19114426 + 102017887 AGCD01022978 MODEL 9056454 pseudo LOC102012243 ubiquitin-like protein FUBI pseudogene NW_004955538 2573003 2573441 + 102012243 AGCD01071128 MODEL 10212720 protein-coding Haus8 HAUS augmin like complex subunit 8 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) NW_004955524 1042643 1042951 + 106147175 AGCD01068733;GBDF01088568;GBDJ01352200;XM_013507279 XP_013362733 MODEL 8860313 protein-coding Gnl3l G protein nucleolar 3 like INVOLVED IN negative regulation of protein sumoylation (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); FOUND IN nucleolus (ortholog); telomerase holoenzyme complex (ortholog) NW_004955475 1792268 1849601 + 102022913 AGCD01054758;AGCD01054759;AGCD01054760;AGCD01054761;AGCD01054762;AGCD01054763;GBCQ01065541;XM_005401525;XM_013502824 XP_005401582;XP_013358278 MODEL 8758381 protein-coding Pla2g4d phospholipase A2 group IVD ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); FOUND IN cytoplasm (ortholog) NW_004955416 8841645 8860381 - 102017565 AGCD01017071;GBDI01198984;XM_005381323 XP_005381380 MODEL 10134877 ncrna LOC106147054 uncharacterized LOC106147054 NW_004955514 5106802 5110809 - 106147054 AGCD01067147;GBDF01166068;XR_001231761 MODEL 39133398 snrna U2 U2 spliceosomal RNA 8889058 protein-coding Insl3 insulin like 3 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); in utero embryonic development (ortholog); male gonad development (ortholog); ASSOCIATED WITH cryptorchidism (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955524 3413764 3415691 + 102015440 AGCD01068896;GBDF01010966;XM_005409546 XP_005409603 MODEL 9050514 protein-coding Dusp6 dual specificity phosphatase 6 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); brain ischemia (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955405 26662018 26666314 - 102014004 AGCD01005204;GBDK01000937;XM_005374434 XP_005374491 MODEL 8759357 protein-coding Cfap299 cilia and flagella associated protein 299 FOUND IN cytoplasm (ortholog) NW_004955433 4581581 5158019 + 102025938 AGCD01031471;AGCD01031472;AGCD01031473;AGCD01031474;AGCD01031475;AGCD01031476;AGCD01031477;AGCD01031478;AGCD01031479;AGCD01031480;AGCD01031481;AGCD01031482;AGCD01031483;AGCD01031484;AGCD01031485;AGCD01031486;AGCD01031487;AGCD01031488;AGCD01031489;AGCD01031490;AGCD01031491;GBDK01431856;XM_005388219;XM_005388220;XM_013516244;XM_013516245;XR_001234746 XP_005388276;XP_005388277;XP_013371698;XP_013371699 MODEL 9059837 protein-coding Kel Kell metallo-endopeptidase (Kell blood group) ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); intracellular magnesium ion homeostasis (ortholog); myelination (ortholog); ASSOCIATED WITH hemolytic disease of the fetus (ortholog); Vein of Galen Aneurysm (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955494 668188 688036 + 102029757 AGCD01061383;GBBH01229481;XM_005405376;XM_005405377;XM_005405378;XR_264099 XP_005405433;XP_005405434;XP_005405435 MODEL 9022618 protein-coding LOC102003354 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7648769 7675912 - 102003354 AGCD01062155;AGCD01062156;XM_005406061 XP_005406118 MODEL 8884673 protein-coding Tgs1 trimethylguanosine synthase 1 ENCODES a protein that exhibits RNA cap trimethylguanosine synthase activity (ortholog); INVOLVED IN 7-methylguanosine cap hypermethylation (ortholog); cellular response to fatty acid (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955454 14896085 14937678 + 102009799 AGCD01045479;GBDI01173633;GBDK01020865;XM_005396075 XP_005396132 MODEL 39132580 rrna 5S_rRNA 5S ribosomal RNA 39133992 misc_rna 7SK 7SK RNA 9060317 protein-coding Akap11 A-kinase anchoring protein 11 ENCODES a protein that exhibits kinase regulator activity (ortholog); protein kinase A catalytic subunit binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); intracellular protein localization (ortholog); positive regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); Mouth Neoplasms (ortholog); schizophrenia (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) NW_004955518 4032738 4083720 - 102021381 AGCD01067818;AGCD01067819;AGCD01067820;GBCB01098177;XM_005409104;XM_013506958;XM_013506959;XM_013506960;XM_013506961;XM_013506962 XP_005409161;XP_013362412;XP_013362413;XP_013362414;XP_013362415;XP_013362416 MODEL 8826751 ncrna LOC102019837 uncharacterized LOC102019837 NW_004955434 1141397 1148917 + 102019837 AGCD01032056;GBDF01005694;XR_001234772 MODEL 9026452 protein-coding Dmrt2 doublesex and mab-3 related transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN embryonic skeletal system development (ortholog); positive regulation of myotome development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH gonadal dysgenesis (ortholog) NW_004955434 5528625 5535783 + 102008765 AGCD01032192;AGCD01032193;GBCE01077894;GBDF01176827;XM_013516376 XP_013371830 MODEL 8714168 protein-coding Kbtbd4 kelch repeat and BTB domain containing 4 NW_004955422 717977 722918 + 102017673 AGCD01022432;GBDF01043941;XM_005383955;XM_005383957 XP_005384012;XP_005384014 MODEL 8989141 ncrna LOC102009882 uncharacterized LOC102009882 NW_004955545 1976556 1983940 - 102009882 AGCD01071876;AGCD01071877;GBDI01212919;XR_001232185 MODEL 8856133 protein-coding Capn12 calpain 12 NW_004955468 761015 771387 + 102011970 AGCD01051738;AGCD01051739;GBCE01016701;XM_005399839;XM_005399840 XP_005399896;XP_005399897 MODEL 8700307 ncrna LOC102005079 uncharacterized LOC102005079 NW_004955437 3889822 3896136 - 102005079 AGCD01034353;AGCD01034354;GBDF01014278;XR_001235105;XR_001235106;XR_261849;XR_261850 MODEL 8966159 protein-coding Hivep1 HIVEP zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); HMG box domain binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH epilepsy (ortholog); myoepithelioma (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955465 2410629 2547889 - 102016900 AGCD01050353;AGCD01050354;GBDK01322567;XM_005398821;XM_013521851;XM_013521852;XM_013521853 XP_005398878;XP_013377305;XP_013377306;XP_013377307 MODEL 9014824 protein-coding Havcr1 hepatitis A virus cellular receptor 1 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); virus receptor activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); phagocytosis, engulfment (ortholog); positive regulation of mast cell activation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); Albuminuria (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); cell surface (ortholog) NW_004955408 11047679 11070492 - 102019779 AGCD01008287;AGCD01008288;GBDF01288090;XM_005376581 XP_005376638 MODEL 9010540 protein-coding Trim16 tripartite motif containing 16 ENCODES a protein that exhibits DNA binding (ortholog); interleukin-1 binding (ortholog); NACHT domain binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of interleukin-1 beta production (ortholog); positive regulation of keratinocyte differentiation (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); PML body (ortholog) NW_004955467 2059793 2084221 + 102018703 AGCD01051300;GBCE01172297;XM_005399325 XP_005399382 MODEL 8766182 protein-coding Actg1 actin gamma 1 ENCODES a protein that exhibits identical protein binding (ortholog); profilin binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to type II interferon (ortholog); morphogenesis of a polarized epithelium (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Mammary Neoplasms (ortholog); autosomal dominant nonsyndromic deafness 20 (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical junction complex (ortholog) NW_004955506 1546678 1549611 + 102005491 AGCD01065271;GBDI01040603;XM_013506066 XP_013361520 MODEL 8720611 pseudo LOC102019496 60S ribosomal protein L7a pseudogene NW_004955414 25104299 25108383 + 102019496 AGCD01015573;AGCD01015574 MODEL 8986383 protein-coding LOC102017140 ras association domain-containing protein 6-like NW_004955502 7963552 7974545 - 102017140 AGCD01064472;AGCD01064473;AGCD01064474;AGCD01064475;XM_013505818 XP_013361272 MODEL 10159557 protein-coding LOC106147055 uncharacterized LOC106147055 NW_004955514 213278 214707 - 106147055 AGCD01067001;GBDI01016081;XM_013506750 XP_013362204 MODEL 8767572 protein-coding Vwa5b2 von Willebrand factor A domain containing 5B2 NW_004955420 23243197 23253202 - 102029752 AGCD01021238;GBCQ01177082;GBCQ01177083;XM_013513358;XM_013513359 XP_013368812;XP_013368813 MODEL 39134267 misc_rna 7SK 7SK RNA 8824659 protein-coding Gatc glutamyl-tRNA amidotransferase subunit C INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 42 (ortholog); Mitochondrial Cardiomyopathy (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) NW_004955455 11184400 11195398 - 102011734 AGCD01045986;GBCQ01066619;XM_005396509 XP_005396566 MODEL 8729710 protein-coding Fgf19 fibroblast growth factor 19 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); heart development (ortholog); negative regulation of bile acid biosynthetic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); colitis (ortholog); Hepatic Insufficiency (ortholog) NW_004955422 16415880 16419528 + 102017135 AGCD01022898;GBDJ01222896;XM_005384961 XP_005385018 MODEL 9010573 ncrna LOC102021281 uncharacterized LOC102021281 NW_004955440 12437369 12460160 - 102021281 AGCD01036429;AGCD01036430;GBDF01158322;XR_001235233;XR_001235234;XR_262018 MODEL 9017508 protein-coding Tymp thymidine phosphorylase ENCODES a protein that exhibits protein homodimerization activity (ortholog); thymidine phosphorylase activity (ortholog); INVOLVED IN dTMP catabolic process (ortholog); pyrimidine nucleoside metabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH 2-aminoadipic 2-oxoadipic aciduria (ortholog); Breast Neoplasms (ortholog); carcinoma (ortholog) NW_004955413 33505424 33509095 - 102005582 AGCD01014673;GBDJ01072364;XM_013511510;XM_013511511 XP_013366964;XP_013366965 MODEL 8895308 protein-coding Bcs1l BCS1 ubiquinol-cytochrome c reductase complex chaperone ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH Bjornstad syndrome (ortholog); brain disease (ortholog); epilepsy (ortholog); FOUND IN mitochondrion (ortholog) NW_004955453 14762237 14766693 - 102007967 AGCD01044873;GBDK01357365;XM_005395637;XM_005395638;XM_005395639;XM_005395640;XM_013519927;XM_013519928;XM_013519929;XM_013519930 XP_005395694;XP_005395695;XP_005395696;XP_005395697;XP_013375381;XP_013375382;XP_013375383;XP_013375384 MODEL 39131790 rrna 5S_rRNA 5S ribosomal RNA 8743226 ncrna LOC102022300 uncharacterized LOC102022300 NW_004955421 10315563 10318178 + 102022300 AGCD01021873;GBCQ01059920;XR_260792 MODEL 39131653 rrna 5S_rRNA 5S ribosomal RNA 8823393 ncrna LOC102014887 uncharacterized LOC102014887 NW_004955471 2515065 2518500 + 102014887 AGCD01053016;GBDF01123135;XR_001237050;XR_263514 MODEL 8963996 pseudo LOC102006864 protein phosphatase 1 regulatory subunit 21 pseudogene NW_004955405 13078719 13081046 + 102006864 AGCD01004872 MODEL 8712673 protein-coding LOC102010643 leukocyte immunoglobulin-like receptor subfamily A member 3 NW_004955567 1316802 1426452 - 102010643 AGCD01074467;AGCD01074468;AGCD01074469;AGCD01074470;AGCD01074471;AGCD01074472;AGCD01074473;AGCD01074474;AGCD01074475;AGCD01074476;XM_013509260 XP_013364714 MODEL 8769955 protein-coding B3galnt2 beta-1,3-N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A11 (ortholog); genetic disease (ortholog); muscular dystrophy-dystroglycanopathy (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955492 4472585 4502704 + 102023273 AGCD01060722;AGCD01060723;GBCB01023657;GBDF01252979;XM_013504679 XP_013360133 MODEL 9012764 protein-coding Psmc3ip PSMC3 interacting protein ENCODES a protein that exhibits DNA binding domain binding (ortholog); identical protein binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); estrogen receptor signaling pathway (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); ovarian dysgenesis 3 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 16464233 16467896 - 102020742 AGCD01043679;GBDF01020452;XM_005394467;XM_013519148 XP_005394524;XP_013374602 MODEL 8701184 protein-coding Tom1l2 target of myb1 like 2 membrane trafficking protein ENCODES a protein that exhibits clathrin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of mitotic nuclear division (ortholog); signal transduction (ortholog) NW_004955577 93877 153381 + 102013775 AGCD01075379;AGCD01075380;AGCD01075381;GBCB01003076;XM_013509625;XM_013509627;XM_013509628;XM_013509629;XR_001232462 XP_013365079;XP_013365081;XP_013365082;XP_013365083 MODEL 9067683 protein-coding Fgf18 fibroblast growth factor 18 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chondrocyte development (ortholog); endochondral ossification (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Diaphragmatic Hernia (ortholog); Dwarfism (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955408 24225459 24260057 + 102021852 AGCD01008604;GBBH01096243;XM_005376329 XP_005376386 MODEL 8984025 protein-coding Pla2g4e phospholipase A2 group IVE ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); N-acyltransferase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN N-acylphosphatidylethanolamine metabolic process (ortholog); positive regulation of endocytic recycling (ortholog); FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955416 8765620 8826184 - 102017011 AGCD01017068;AGCD01017069;AGCD01017070;GBCB01100712;XM_005381321;XM_013512526;XM_013512528 XP_005381378;XP_013367980;XP_013367982 MODEL 8842406 protein-coding Tsr1 TSR1 ribosome maturation factor ASSOCIATED WITH primary microcephaly (ortholog) NW_004955481 907441 919613 + 102010367 AGCD01056816;GBDF01127365;XM_005402590 XP_005402647 MODEL 9059633 protein-coding Arsb arylsulfatase B ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-acetylgalactosamine-4-sulfatase activity (ortholog); N-acetylgalactosamine-6-sulfatase activity (ortholog); INVOLVED IN anterior head development (ortholog); autophagy (ortholog); chondroitin sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); metachromatic leukodystrophy (ortholog); FOUND IN cell surface (ortholog); lysosome (ortholog) NW_004955425 22120507 22281221 + 102025379 AGCD01025816;AGCD01025817;AGCD01025818;GBCQ01034074;GBDF01235622;XM_013514875 XP_013370329 MODEL 8767657 pseudo LOC102005858 40S ribosomal protein S4-like NW_004955575 415119 417705 + 102005858 AGCD01075221 MODEL 8990177 pseudo LOC102017146 eukaryotic translation initiation factor 3 subunit C pseudogene NW_004955428 16522665 16525883 + 102017146 AGCD01028024 MODEL 39132459 snrna U6 U6 spliceosomal RNA 39134268 misc_rna 7SK 7SK RNA 8756924 ncrna LOC102017890 uncharacterized LOC102017890 NW_004955424 1228693 1258354 - 102017890 AGCD01024233;AGCD01024234;GBDF01055490;XR_001234151;XR_261022 MODEL 10208033 ncrna LOC106150035 uncharacterized LOC106150035 NW_004955406 19775774 19777754 - 106150035 AGCD01006089;XR_001236586 MODEL 8972546 protein-coding Ap2b1 adaptor related protein complex 2 subunit beta 1 ENCODES a protein that exhibits clathrin binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); clathrin coat assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH middle cerebral artery infarction (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin adaptor complex (ortholog); clathrin coat (ortholog) NW_004955481 10061021 10175070 + 102017016 AGCD01057135;AGCD01057136;AGCD01057137;GBDF01008348;XM_005402876;XM_005402877;XM_005402881 XP_005402933;XP_005402934;XP_005402938 MODEL 8951104 ncrna LOC102024026 uncharacterized LOC102024026 NW_004955498 3548837 3565146 - 102024026 AGCD01062905;AGCD01062906;GBDF01286420;XR_264214 MODEL 8931798 trna Trnas-aga transfer RNA serine (anticodon AGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978802 AGCD01018131;AGCD01050593;AGCD01050595;AGCD01050596;AGCD01051466;AGCD01057629 MODEL 8978545 protein-coding Sergef secretion regulating guanine nucleotide exchange factor INVOLVED IN negative regulation of protein secretion (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955414 32579419 32796714 - 102012528 AGCD01015782;AGCD01015783;GBCQ01059662;XM_005380391;XM_005380392;XR_001233167;XR_001233168;XR_001233169;XR_001233170;XR_260218;XR_260219;XR_260220;XR_260221 XP_005380448;XP_005380449 MODEL 8889589 protein-coding Akap12 A-kinase anchoring protein 12 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955439 10241298 10262416 - 102004008 AGCD01035861;AGCD01035862;GBBH01051193;XM_005390585;XM_013517396 XP_005390642;XP_013372850 MODEL 8763434 protein-coding LOC102005080 transcription termination factor 3, mitochondrial-like NW_004955536 102197 103480 + 102005080 AGCD01070713;XM_013507725 XP_013363179 MODEL 8729309 protein-coding Gnmt glycine N-methyltransferase ENCODES a protein that exhibits folic acid binding (ortholog); glycine binding (ortholog); glycine N-methyltransferase activity (ortholog); INVOLVED IN glycine catabolic process (ortholog); glycine metabolic process (ortholog); glycogen metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH Chronic Hepatitis (ortholog); Experimental Diabetes Mellitus (ortholog); glycine N-methyltransferase deficiency (ortholog); FOUND IN cytosol (ortholog); methyltransferase complex (ortholog) NW_004955437 8944288 8946642 + 102027229 AGCD01034508;GBDF01234278;XM_005389735 XP_005389792 MODEL 8990785 protein-coding Adgrg6 adhesion G protein-coupled receptor G6 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); laminin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cartilage development (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); genetic disease (ortholog); idiopathic scoliosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955436 17804548 17931667 - 102009873 AGCD01033951;AGCD01033952;GBCE01008915;GBCE01008917;XM_005389253;XM_005389254;XM_013516670;XM_013516671;XM_013516672;XM_013516673;XM_013516674 XP_005389310;XP_005389311;XP_013372124;XP_013372125;XP_013372126;XP_013372127;XP_013372128 MODEL 8785048 protein-coding Cfap300 cilia and flagella associated protein 300 ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia 38 (ortholog); visceral heterotaxy (ortholog) NW_004955412 5368983 5399406 + 102010563 AGCD01012632;GBDF01120319;XM_005377970 XP_005378027 MODEL 8854509 protein-coding Trim17 tripartite motif containing 17 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN autophagy (ortholog); protein autoubiquitination (ortholog); regulation of protein localization (ortholog) NW_004955581 107251 113907 + 102011712 AGCD01075657;GBDF01052383;XM_005414229;XM_005414230;XM_005414231 XP_005414286;XP_005414287;XP_005414288 MODEL 8744555 protein-coding Dusp7 dual specificity phosphatase 7 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of MAP kinase activity (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog) NW_004955532 3685137 3691933 - 102026152 AGCD01070294;GBCB01023261;GBCE01096661;XM_005410343 XP_005410400 MODEL 8913814 protein-coding LOC102003358 zinc finger protein 709-like NW_004955499 342903 348346 + 102003358 AGCD01063222;GBDI01384946;XM_013505570 XP_013361024 MODEL 39132581 rrna 5S_rRNA 5S ribosomal RNA 8894776 protein-coding Fam174b family with sequence similarity 174 member B INVOLVED IN Golgi organization (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955416 20899846 20926531 - 102016806 AGCD01017472;GBBH01004582;GBDI01071543;XM_005381705;XM_013512628 XP_005381762;XP_013368082 MODEL 8722929 ncrna LOC102021283 uncharacterized LOC102021283 NW_004955441 9505985 9509614 + 102021283 AGCD01037022;GBCB01131781;XR_262065 MODEL 8837504 pseudo LOC102012245 eukaryotic translation initiation factor 5 pseudogene NW_004955542 1250369 1252115 - 102012245 AGCD01071498 MODEL 39131791 rrna 5S_rRNA 5S ribosomal RNA 8835217 protein-coding Th tyrosine hydroxylase ENCODES a protein that exhibits amino acid binding (ortholog); dopamine binding (ortholog); enzyme binding (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); animal organ morphogenesis (ortholog); catecholamine biosynthetic process (ortholog); PARTICIPATES IN aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; dopamine biosynthetic pathway; ASSOCIATED WITH autosomal recessive Segawa syndrome (ortholog); brain disease (ortholog); Brain Injuries (ortholog); FOUND IN neuron projection terminus; perikaryon; axon (ortholog) NW_004955422 13943590 13951102 - 102006672 AGCD01022843;GBDF01056603;XM_005384197 XP_005384254 MODEL 9000119 pseudo LOC102009886 39S ribosomal protein L32, mitochondrial pseudogene NW_004955442 7886469 7887029 + 102009886 AGCD01037628 MODEL 39133400 snrna U2 U2 spliceosomal RNA 8842008 protein-coding Atp11c ATPase phospholipid transporting 11C ENCODES a protein that exhibits phosphatidylethanolamine flippase activity (ortholog); phosphatidylserine flippase activity (ortholog); INVOLVED IN phospholipid translocation (ortholog); positive regulation of B cell differentiation (ortholog); pre-B cell differentiation (ortholog); ASSOCIATED WITH X-linked congenital hemolytic anemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) NW_004955489 5394553 5567295 + 102003247 AGCD01059939;AGCD01059940;GBDF01079626;XM_005404550;XM_005404551;XM_013504484;XM_013504485 XP_005404607;XP_005404608;XP_013359938;XP_013359939 MODEL 8845910 pseudo LOC102022301 ubiquitin carboxyl-terminal hydrolase 44-like NW_004955489 6080515 6085343 - 102022301 AGCD01059957 MODEL 8937832 protein-coding Kbtbd7 kelch repeat and BTB domain containing 7 INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein K48-linked ubiquitination (ortholog); regulation of Rac protein signal transduction (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) NW_004955518 4979207 4984721 + 102025156 AGCD01067847;GBDF01110951;XM_005409118 XP_005409175 MODEL 8756789 protein-coding Hivep2 HIVEP zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 13 (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955436 17368948 17549957 + 102009540 AGCD01033947;AGCD01033948;GBBH01177065;XM_005389252 XP_005389309 MODEL 8921083 protein-coding Tomm20 translocase of outer mitochondrial membrane 20 ENCODES a protein that exhibits mitochondrion targeting sequence binding (ortholog); protein-transporting ATPase activity (ortholog); unfolded protein binding (ortholog); INVOLVED IN obsolete protein targeting to mitochondrion (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); response to muscle activity (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; ASSOCIATED WITH muscular atrophy (ortholog); FOUND IN cell periphery (ortholog); migrasome (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) NW_004955492 4759438 4771060 + 102025369 AGCD01060729;GBDF01010948;XM_005404954 XP_005405011 MODEL 8763174 protein-coding Psmc4 proteasome 26S subunit, ATPase 4 INVOLVED IN blastocyst development (ortholog); regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN cytosol (ortholog); cytosolic proteasome complex (ortholog); inclusion body (ortholog) NW_004955578 1113445 1120050 - 102021402 AGCD01075510;GBCC01049534;XM_005414079 XP_005414136 MODEL 10154685 ncrna LOC106147056 uncharacterized LOC106147056 NW_004955402 18792269 18825888 - 106147056 AGCD01000540;GBDI01034192;XR_001231763;XR_001231772;XR_001231775;XR_001231782;XR_001231786;XR_001231793;XR_001231799 MODEL 8799895 protein-coding Havcr2 hepatitis A virus cellular receptor 2 ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to Gram-positive bacterium (ortholog); macrophage activation involved in immune response (ortholog); ASSOCIATED WITH asthma (ortholog); cystic fibrosis (ortholog); Eczema (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); immunological synapse (ortholog) NW_004955408 11289920 11311216 - 102011629 AGCD01008306;GBCE01034226;XM_005376221;XM_005376222 XP_005376278;XP_005376279 MODEL 8955964 pseudo LOC102019498 eukaryotic peptide chain release factor subunit 1-like NW_004955415 4586723 4588014 + 102019498 AGCD01015975 MODEL 9039182 protein-coding Kera keratocan INVOLVED IN cornea development in camera-type eye (ortholog); ASSOCIATED WITH arcus senilis (ortholog); cornea plana (ortholog); Cornea Plana 2 (ortholog) NW_004955405 28256054 28263559 - 102019353 AGCD01005234;GBCC01000239;XM_005374448;XM_013518226 XP_005374505;XP_013373680 MODEL 8955744 protein-coding Gatd1 glutamine amidotransferase class 1 domain containing 1 NW_004955476 11350827 11354844 + 102011863 AGCD01055453;GBBH01185293;GBDF01127137;XM_013502980;XM_013502981 XP_013358434;XP_013358435 MODEL 8848088 protein-coding Actg2 actin gamma 2, smooth muscle INVOLVED IN cellular response to acetaldehyde (ortholog); cellular response to interleukin-6 (ortholog); response to ethanol (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcoholic liver cirrhosis (ortholog); autosomal dominant familial visceral neuropathy (ortholog); FOUND IN cell periphery (ortholog) NW_004955424 11779805 11802446 - 102007914 AGCD01024574;GBDJ01017125;XM_005385535 XP_005385592 MODEL 39133993 misc_rna 7SK 7SK RNA 8868197 protein-coding Tyms thymidylate synthetase ENCODES a protein that exhibits folic acid binding (ortholog); heterocyclic compound binding (ortholog); mRNA binding (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); cartilage development (ortholog); circadian rhythm (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog) NW_004955402 9295862 9304952 - 102022652 AGCD01000212;GBDF01043219;GBDJ01114306;XM_013519582 XP_013375036 MODEL 39131654 rrna 5S_rRNA 5S ribosomal RNA 8816454 ncrna LOC102006867 uncharacterized LOC102006867 NW_004955452 14398434 14403748 + 102006867 AGCD01044466;GBDF01039609;XR_001236058;XR_262689 MODEL 8779886 protein-coding Dmrt3 doublesex and mab-3 related transcription factor 3 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult walking behavior (ortholog); male sex differentiation (ortholog); regulation of odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN nucleus (ortholog) NW_004955434 5455449 5470343 + 102008450 AGCD01032190;GBBH01113534;XM_013516294 XP_013371748 MODEL 9055096 protein-coding LOC102014889 amyloid protein A-like NW_004955414 32876738 32887602 - 102014889 AGCD01015784;AGCD01015785;XM_005380398;XM_013512073 XP_005380455;XP_013367527 MODEL 8929206 protein-coding LOC102005859 RE1-silencing transcription factor NW_004955447 14183770 14196122 - 102005859 AGCD01040989;GBBH01193455;GBCE01108856;XM_013518551 XP_013374005 MODEL 8930452 pseudo LOC102003359 transmembrane protein 254 pseudogene NW_004955424 24750779 24751166 - 102003359 AGCD01025032 MODEL 9006970 protein-coding Capn13 calpain 13 NW_004955469 12497890 12569453 - 102005361 AGCD01052582;AGCD01052583;GBDI01317938;XM_013522570 XP_013378024 MODEL 8952141 ncrna LOC102010644 uncharacterized LOC102010644 NW_004955445 12260606 12264915 + 102010644 AGCD01039746;GBDF01008996;XR_001235639 MODEL 8889639 protein-coding B3galt1 beta-1,3-galactosyltransferase 1 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN glucosylceramide metabolic process (ortholog); oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955449 6452189 7007329 - 102007167 AGCD01041956;AGCD01041957;AGCD01041958;AGCD01041959;AGCD01041960;AGCD01041961;AGCD01041962;AGCD01041963;AGCD01041964;AGCD01041965;AGCD01041966;AGCD01041967;AGCD01041968;GBCB01088572;XM_005393281;XM_005393282;XM_013518796;XR_001235825 XP_005393338;XP_005393339;XP_013374250 MODEL 8805535 protein-coding Insl4 insulin like 4 NW_004955434 9365212 9367503 + 102029992 AGCD01032299;GBDK01328682;XM_005388657 XP_005388714 MODEL 8805014 protein-coding Pdcd1lg2 programmed cell death 1 ligand 2 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN negative regulation of activated T cell proliferation (ortholog); negative regulation of interleukin-10 production (ortholog); negative regulation of T cell activation (ortholog); ASSOCIATED WITH autoimmune hepatitis (ortholog); Coxsackievirus Infections (ortholog); cutaneous leishmaniasis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955434 9540047 9559335 + 102011356 AGCD01032305;XM_013516295 XP_013371749 MODEL 8725054 protein-coding Ap2m1 adaptor related protein complex 2 subunit mu 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); signal sequence binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of protein localization to plasma membrane (ortholog); positive regulation of receptor internalization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 60 with seizures (ortholog); developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog) NW_004955420 23281720 23290430 - 102026752 AGCD01021240;GBCB01006751;XM_005383348;XM_005383349 XP_005383405;XP_005383406 MODEL 9051765 protein-coding Vwa7 von Willebrand factor A domain containing 7 NW_004955437 299554 308609 - 102004752 AGCD01034117;AGCD01034118;GBBH01227762;GBDJ01390262;XM_013516802 XP_013372256 MODEL 8941523 protein-coding LOC102005082 heat shock 70 kDa protein 1B NW_004955437 356898 358735 + 102005082 AGCD01034126;GBBH01030858;GBCB01006678;XM_005390107 XP_005390164 MODEL 9051097 protein-coding Gnpat glyceronephosphate O-acyltransferase ENCODES a protein that exhibits catalytic activity (ortholog); glycerone-phosphate O-acyltransferase activity (ortholog); INVOLVED IN cerebellum morphogenesis (ortholog); ether lipid biosynthetic process (ortholog); membrane organization (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH disease of mental health (ortholog); genetic disease (ortholog); prostate cancer (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955492 7489080 7519590 - 102009288 AGCD01060798;GBCB01025381;XM_005404978 XP_005405035 MODEL 8788599 protein-coding Fgf2 fibroblast growth factor 2 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine binding (ortholog); cytokine activity (ortholog); INVOLVED IN angiogenesis involved in coronary vascular morphogenesis (ortholog); behavioral response to ethanol (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN ceric oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Animal Mammary Neoplasms (ortholog); Arteriovenous Fistula (ortholog); FOUND IN extracellular space (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955428 17840554 17894779 - 102017484 AGCD01028052;GBBH01210560;GBCQ01087264;XM_013515320 XP_013370774 MODEL 9005007 ncrna LOC102019838 uncharacterized LOC102019838 NW_004955434 18189850 18227807 + 102019838 AGCD01032555;AGCD01032556;AGCD01032557;AGCD01032558;GBDF01253666;XR_001234759;XR_001234760;XR_001234761;XR_261631;XR_261632 MODEL 9052304 protein-coding Bdh1 3-hydroxybutyrate dehydrogenase 1 ENCODES a protein that exhibits 3-hydroxybutyrate dehydrogenase activity (ortholog); phospholipid binding (ortholog); INVOLVED IN adipose tissue development (ortholog); liver development (ortholog); response to cadmium ion (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ketone bodies metabolic pathway; succinyl-CoA:3-oxoacid transferase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955420 13454379 13486700 - 102023364 AGCD01020922;AGCD01020923;GBCB01044106;XM_005383174;XM_005383176 XP_005383231;XP_005383233 MODEL 9026206 protein-coding LOC102017147 vomeronasal type-1 receptor 90-like NW_004955429 12324110 12325018 - 102017147 AGCD01028713;XM_005387245 XP_005387302 MODEL 8757184 protein-coding Arsg arylsulfatase G ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-sulfoglucosamine-3-sulfatase activity (ortholog); INVOLVED IN gene expression (ortholog); glial cell differentiation (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); fundus dystrophy (ortholog); mucopolysaccharidosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); lysosome (ortholog) NW_004955478 4326669 4475559 - 102027638 AGCD01055847;AGCD01055848;AGCD01055849;AGCD01055850;AGCD01055851;GBDF01184931;XM_013503199;XM_013503200;XM_013503201;XM_013503202;XM_013503203;XM_013503204;XM_013503205;XM_013503206;XM_013503207;XM_013503208 XP_013358653;XP_013358654;XP_013358655;XP_013358656;XP_013358657;XP_013358658;XP_013358659;XP_013358660;XP_013358661;XP_013358662 MODEL 8707790 protein-coding Hax1 HCLS1 associated protein X-1 ENCODES a protein that exhibits interleukin-1 binding (ortholog); protein domain specific binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); granulocyte colony-stimulating factor signaling pathway (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary sensory neuropathy type 4 (ortholog); neutropenia (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); clathrin-coated vesicle (ortholog) NW_004955545 816789 819667 + 102009107 AGCD01071817;GBBH01119014;XM_005411511;XM_005411512;XM_005411513;XM_005411514 XP_005411568;XP_005411569;XP_005411570;XP_005411571 MODEL 39134269 misc_rna 7SK 7SK RNA 8982157 protein-coding Trim2 tripartite motif containing 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Charcot-Marie-Tooth disease type 2R (ortholog); osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955471 7523895 7698436 + 102029852 AGCD01053154;AGCD01053155;AGCD01053156;AGCD01053157;AGCD01053158;AGCD01053159;AGCD01053160;GBCQ01127466;XM_005400911;XM_005400912;XM_005400913;XM_005400914;XM_005400915;XM_005400916;XM_005400917;XM_005400918;XM_005400920;XM_005400921;XM_013522895;XM_013522896 XP_005400968;XP_005400969;XP_005400970;XP_005400971;XP_005400972;XP_005400973;XP_005400974;XP_005400975;XP_005400977;XP_005400978;XP_013378349;XP_013378350 MODEL 9037887 protein-coding LOC102024027 granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like NW_004955499 966081 982611 + 102024027 AGCD01063302;AGCD01063303;GBBH01118355;GBBH01118356;XM_013505607 XP_013361061 MODEL 39131793 rrna 5S_rRNA 5S ribosomal RNA 8901152 trna Trnas-cga transfer RNA serine (anticodon CGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955501;NW_004955465;NW_004955465;NW_004955467 1580746;13301831;13138748;8814367 1580827;13301912;13138829;8814448 +;-;+;+ 101978805 AGCD01050590;AGCD01050597;AGCD01051472;AGCD01064055 MODEL 8921510 protein-coding Thada THADA armadillo repeat containing ENCODES a protein that exhibits enzyme regulator activity (ortholog); INVOLVED IN lipid homeostasis (ortholog); negative regulation of endoplasmic reticulum calcium ion concentration (ortholog); tRNA methylation (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); type 2 diabetes mellitus (ortholog) NW_004955441 10471555 10792881 - 102024283 AGCD01037089;AGCD01037090;AGCD01037091;AGCD01037092;AGCD01037093;AGCD01037094;GBDI01224141;XM_013517530 XP_013372984 MODEL 8699863 protein-coding Pla2g4f phospholipase A2 group IVF ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); obsolete calcium-dependent phospholipase A2 activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN arachidonate secretion (ortholog); cellular response to antibiotic (ortholog); fatty acid transport (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); ruffle membrane (ortholog) NW_004955416 8876560 8889764 - 102017867 AGCD01017071;GBBH01062799;XM_005381324;XM_005381325;XM_013512650 XP_005381381;XP_005381382;XP_013368104 MODEL 8760477 protein-coding Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit ENCODES a protein that exhibits P-type potassium:proton transporter activity (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN potassium ion homeostasis (ortholog); regulation of pH (ortholog); response to metal ion (ortholog); ASSOCIATED WITH hypokalemia (ortholog); Metabolic Syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955497 225401 251024 + 102008640 AGCD01062403;AGCD01062404;GBDJ01132176;GBDJ01132177;XM_013505518 XP_013360972 MODEL 8869911 protein-coding Tsr2 TSR2 ribosome maturation factor ASSOCIATED WITH Diamond-Blackfan anemia 14 with mandibulofacial dysostosis (ortholog); Diamond-Blackfan anemia 15 with mandibulofacial dysostosis (ortholog) NW_004955475 1698926 1703404 + 102022384 AGCD01054758;GBCQ01101886;XM_005401522;XM_013502825 XP_005401579;XP_013358279 MODEL 8895963 protein-coding Capn14 calpain 14 ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); eosinophilic esophagitis (ortholog) NW_004955469 12899174 12929408 - 102023251 AGCD01052588;AGCD01052589;GBDK01133219;XM_013522553;XM_013522554;XM_013522555;XM_013522556 XP_013378007;XP_013378008;XP_013378009;XP_013378010 MODEL 39132460 snrna U6 U6 spliceosomal RNA 10301189 protein-coding LOC106147057 uncharacterized LOC106147057 NW_004955514 1082367 1083540 - 106147057 AGCD01067036;GBDF01251435;XM_013506766 XP_013362220 MODEL 8796521 protein-coding Tomm22 translocase of outer mitochondrial membrane 22 ENCODES a protein that exhibits mitochondrion targeting sequence binding (ortholog); protein transmembrane transporter activity (ortholog); INVOLVED IN obsolete protein targeting to mitochondrion (ortholog); positive regulation of apoptotic process (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; FOUND IN membrane (ortholog); mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) NW_004955413 24799735 24801820 + 102022583 AGCD01014379;GBDF01048765;XM_005379268 XP_005379325 MODEL 8857109 protein-coding Psmc5 proteasome 26S subunit, ATPase 5 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA-binding transcription factor binding (ortholog); general transcription initiation factor binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of inclusion body assembly (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); Neurodevelopmental Disorders (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955478 7996902 8002183 - 102019597 AGCD01056005;GBDK01011483;XM_005402183 XP_005402240 MODEL 39132585 rrna 5S_rRNA 5S ribosomal RNA 8842883 protein-coding Gatd3 glutamine amidotransferase class 1 domain containing 3 ASSOCIATED WITH autistic disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955407 41247749 41255369 - 102023005 AGCD01007862;AGCD01007863;GBBH01031990;GBDI01008445;XM_013505403 XP_013360857 MODEL 39133994 misc_rna 7SK 7SK RNA 10202549 protein-coding Fam174c family with sequence similarity 174 member C FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955495 6631767 6634282 - 106146226 AGCD01062086;GBDJ01189190;XM_005405980;XM_013505299 XP_005406037;XP_013360753 MODEL 8732450 pseudo LOC102021286 methylosome subunit pICln pseudogene NW_004955559 1489054 1489989 + 102021286 AGCD01073647;XM_005412899 MODEL 9063223 ncrna LOC102017891 uncharacterized LOC102017891 NW_004955424 10729774 10746212 - 102017891 AGCD01024526;GBDK01082355;XR_001234189;XR_001234190;XR_001234191;XR_001234192;XR_001234193;XR_001234194;XR_001234195;XR_001234196;XR_001234197 MODEL 39133402 snrna U2 U2 spliceosomal RNA 9042515 protein-coding LOC102012249 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955546 2009351 2010344 + 102012249 AGCD01072081;XM_013508417 XP_013363871 MODEL 8993271 protein-coding LOC102006869 zinc finger protein 14-like NW_004955453 6825362 6828549 + 102006869 AGCD01044731;XM_005395440 XP_005395497 MODEL 9027619 protein-coding LOC102003362 60S ribosomal protein L29-like NW_004955505 6929524 6988367 + 102003362 AGCD01065190;AGCD01065191;AGCD01065192;AGCD01065193;XM_005407177 XP_005407234 MODEL 41410892 protein-coding KBTBD7 kelch repeat and BTB domain containing 7 8822607 protein-coding Akap13 A-kinase anchoring protein 13 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); MAP-kinase scaffold activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); bone development (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Esophageal Neoplasms (ortholog); Prostatic Neoplasms (ortholog); renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); cell cortex (ortholog) NW_004955416 19006206 19327523 - 102014136 AGCD01017414;AGCD01017415;AGCD01017416;AGCD01017417;AGCD01017418;AGCD01017419;AGCD01017420;AGCD01017421;AGCD01017422;GBCE01117069;XM_005381591;XM_013512530;XM_013512531;XM_013512532;XM_013512533;XM_013512534 XP_005381648;XP_013367984;XP_013367985;XP_013367986;XP_013367987;XP_013367988 MODEL 8810455 protein-coding LOC102010649 zinc finger protein 134 NW_004955584 442199 447345 + 102010649 AGCD01075941;GBDF01124692;XM_005414366;XM_013509874;XM_013509875 XP_005414423;XP_013365328;XP_013365329 MODEL 9024376 protein-coding Adgrg7 adhesion G protein-coupled receptor G7 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955427 2234640 2305510 + 102023379 AGCD01026894;AGCD01026895;GBCQ01162719;XM_005386303;XM_005386304 XP_005386360;XP_005386361 MODEL 8962552 protein-coding Cfap36 cilia and flagella associated protein 36 FOUND IN ciliary base (ortholog); ciliary transition zone (ortholog) NW_004955424 27522324 27547437 - 102006685 AGCD01025118;AGCD01025119;GBDF01008484;XM_005385771 XP_005385828 MODEL 8975162 protein-coding Dusp8 dual specificity phosphatase 8 ENCODES a protein that exhibits phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway NW_004955476 10816647 10826787 + 102029618 AGCD01055431;GBCE01057397;GBDF01144903;XM_013503009 XP_013358463 MODEL 8997198 protein-coding Hivep3 HIVEP zinc finger 3 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN nucleus (ortholog) NW_004955537 1255284 1589514 - 102007277 AGCD01070890;AGCD01070891;AGCD01070892;AGCD01070893;AGCD01070894;AGCD01070895;AGCD01070896;GBDI01105470;XM_005410588;XM_005410591;XM_013507767;XM_013507768;XM_013507769;XM_013507770;XM_013507771 XP_005410645;XP_005410648;XP_013363221;XP_013363222;XP_013363223;XP_013363224;XP_013363225 MODEL 8708855 protein-coding Actl10 actin like 10 NW_004955422 27650166 27651452 - 102026990 AGCD01023331;GBDF01090365;XM_005384923 XP_005384980 MODEL 39131655 rrna 5S_rRNA 5S ribosomal RNA 9003581 protein-coding Gnpda1 glucosamine-6-phosphate deaminase 1 ENCODES a protein that exhibits glucosamine-6-phosphate deaminase activity (ortholog); INVOLVED IN generation of precursor metabolites and energy (ortholog); glucosamine catabolic process (ortholog); UDP-N-acetylglucosamine biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955415 11770111 11783430 + 102028185 AGCD01016176;GBDK01082590;XM_005380710;XM_005380711 XP_005380767;XP_005380768 MODEL 8790591 protein-coding Bdh2 3-hydroxybutyrate dehydrogenase 2 ENCODES a protein that exhibits 3-hydroxybutyrate dehydrogenase activity (ortholog); NAD binding (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fatty acid beta-oxidation (ortholog); siderophore biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955496 5518403 5534325 + 102012338 AGCD01062355;XM_005406232 XP_005406289 MODEL 8786886 protein-coding Tyr tyrosinase ENCODES a protein that exhibits copper ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell population proliferation (ortholog); eye pigmentation (ortholog); melanin biosynthetic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Albinism (ortholog); basal cell carcinoma (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955414 4244035 4314001 - 102005248 AGCD01014860;GBDF01275950;XM_005379730 XP_005379787 MODEL 8723944 pseudo LOC102005865 transcription factor BTF3 homolog 4 pseudogene NW_004955588 220604 221041 + 102005865 AGCD01076095 MODEL 8948060 protein-coding LOC102009890 kallikrein-4-like NW_004955558 2014462 2080060 + 102009890 AGCD01073496;AGCD01073497;AGCD01073498;AGCD01073499;AGCD01073500;AGCD01073501;AGCD01073502;AGCD01073503;AGCD01073504;AGCD01073505;AGCD01073506;AGCD01073507;AGCD01073508;AGCD01073509;XM_013508851 XP_013364305 MODEL 8729976 protein-coding Serinc1 serine incorporator 1 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN membrane biogenesis (ortholog); phosphatidylserine metabolic process (ortholog); sphingolipid metabolic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955436 4414629 4435353 - 102025505 AGCD01033663;AGCD01033664;AGCD01033665;GBCE01004273;XM_005389150 XP_005389207 MODEL 8710384 protein-coding Fam177a1 family with sequence similarity 177 member A1 NW_004955409 25946694 25969387 - 102004572 AGCD01010143;AGCD01010144;GBDI01011683;XM_005376932 XP_005376989 MODEL 8843430 protein-coding B3galt2 beta-1,3-galactosyltransferase 2 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN glucosylceramide metabolic process (ortholog); oligosaccharide biosynthetic process (ortholog) NW_004955406 30603238 30610822 - 102021090 AGCD01006377;GBCE01083240;XM_005375108 XP_005375165 MODEL 9046024 protein-coding Trim21 tripartite motif containing 21 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); innate immune response (ortholog); negative regulation of innate immune response (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleus (ortholog) NW_004955414 20066109 20077331 - 102014130 AGCD01015355;GBCQ01032815;XM_005380044;XM_005380045;XR_001233160 XP_005380101;XP_005380102 MODEL 8776668 protein-coding Insl5 insulin like 5 INVOLVED IN positive regulation of feeding behavior (ortholog) NW_004955423 24113596 24116795 + 102019078 AGCD01024031;GBDF01119655;XM_005385288 XP_005385345 MODEL 8915234 trna Trnas-gcu transfer RNA serine (anticodon GCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978842 AGCD01012398;AGCD01016984;AGCD01022970;AGCD01050591;AGCD01050613;AGCD01050626;AGCD01051471;AGCD01057630;AGCD01063790 MODEL 8708009 pseudo LOC102019505 AP-3 complex subunit sigma-1 pseudogene NW_004955419 14065813 14066477 + 102019505 AGCD01020010 MODEL 8962386 protein-coding Ap2s1 adaptor related protein complex 2 subunit sigma 1 INVOLVED IN postsynaptic neurotransmitter receptor internalization (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH COVID-19 (ortholog); familial hypocalciuric hypercalcemia 3 (ortholog); genetic disease (ortholog); FOUND IN AP-2 adaptor complex (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); glutamatergic synapse (ortholog) NW_004955574 835272 845710 - 102030361 AGCD01075131;GBDK01017755;XM_005413843;XM_005413844 XP_005413900;XP_005413901 MODEL 8899021 protein-coding Kgd4 alpha-ketoglutarate dehydrogenase subunit 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); FOUND IN mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) NW_004955446 38161 50167 + 102007381 AGCD01039921;AGCD01039922;GBCQ01034871;XM_005392589;XM_005392591 XP_005392646;XP_005392648 MODEL 8887057 ncrna LOC102010653 uncharacterized LOC102010653 NW_004955403 10370654 10380440 + 102010653 AGCD01001921;GBDF01176244;XR_001234452;XR_001234453;XR_259166 MODEL 10390703 ncrna LOC106150036 uncharacterized LOC106150036 NW_004955406 20000843 20002443 - 106150036 AGCD01006095;GBDF01145012;XR_001236588 MODEL 8735812 pseudo LOC102017150 transcription factor Sp1 pseudogene NW_004955431 16457241 16462926 - 102017150 AGCD01030378 MODEL 8710709 protein-coding LOC102019841 melanoma-associated antigen B3-like NW_004955531 802330 814697 - 102019841 AGCD01070013;GBDF01304372;XM_005410137;XM_005410138;XM_013507560 XP_005410194;XP_005410195;XP_013363014 MODEL 8997334 protein-coding Arsh arylsulfatase family member H ASSOCIATED WITH autism spectrum disorder (ortholog) NW_004955499 1787356 1818206 + 102012979 AGCD01063385;AGCD01063386;AGCD01063387;XM_005406525;XM_013505555 XP_005406582;XP_013361009 MODEL 8963761 protein-coding Capn15 calpain 15 ASSOCIATED WITH coloboma (ortholog); OCULOGASTROINTESTINAL NEURODEVELOPMENTAL SYNDROME (ortholog) NW_004955442 16649600 16674252 - 102026482 AGCD01037905;GBDK01236677;XM_005391642;XM_005391643;XM_013517816;XM_013517817 XP_005391699;XP_005391700;XP_013373270;XP_013373271 MODEL 8829949 protein-coding Tomm34 translocase of outer mitochondrial membrane 34 ENCODES a protein that exhibits heat shock protein binding (ortholog); INVOLVED IN obsolete protein targeting to mitochondrion (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955445 12401348 12420548 + 102013770 AGCD01039751;GBBH01164511;XM_005392455 XP_005392512 MODEL 39132589 rrna 5S_rRNA 5S ribosomal RNA 9059505 protein-coding LOC102022303 spermatogenesis-associated protein 31E1-like NW_004955491 31398 33727 - 102022303 AGCD01060313;XM_005404875 XP_005404932 MODEL 9057638 protein-coding Hbb hemoglobin subunit beta ENCODES a protein that exhibits haptoglobin binding (ortholog); hemoglobin alpha binding (ortholog); hemoglobin beta binding (ortholog); INVOLVED IN erythrocyte development (ortholog); glutathione metabolic process (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH acute chest syndrome (ortholog); alpha thalassemia (ortholog); Alpha-Thalassemia 2 (ortholog); FOUND IN extracellular space (ortholog); haptoglobin-hemoglobin complex (ortholog); hemoglobin complex (ortholog) NW_004955414 21188012 21189363 - 102028849 AGCD01015410;GBBH01000342;XM_005380076 XP_005380133 MODEL 39134270 misc_rna 7SK 7SK RNA 39131794 rrna 5S_rRNA 5S ribosomal RNA 8981962 protein-coding Gatm glycine amidinotransferase ENCODES a protein that exhibits amidinotransferase activity (ortholog); glycine amidinotransferase activity (ortholog); INVOLVED IN creatine biosynthetic process (ortholog); creatine metabolic process (ortholog); embryonic liver development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; creatine metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute kidney failure (ortholog); AGAT deficiency (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955409 8068524 8084603 + 102020986 AGCD01009377;GBBH01011356;XM_005376731 XP_005376788 MODEL 8721272 pseudo LOC102017894 protein FAM69B-like NW_004955425 7507821 7533856 + 102017894 AGCD01025387 MODEL 8855856 protein-coding Gnpda2 glucosamine-6-phosphate deaminase 2 ENCODES a protein that exhibits glucosamine-6-phosphate deaminase activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine biosynthetic process (ortholog); ASSOCIATED WITH Body Weight (ortholog); obesity (ortholog) NW_004955443 3338300 3360561 + 102004526 AGCD01038191;GBDF01162239;XM_013518064;XM_013518065 XP_013373518;XP_013373519 MODEL 8960403 protein-coding LOC102006871 torsin-1A-interacting protein 2, isoform IFRG15 NW_004955406 19105586 19108003 - 102006871 AGCD01006074;GBDJ01313313;XM_005374968 XP_005375025 MODEL 8766178 ncrna LOC102005085 uncharacterized LOC102005085 NW_004955442 14237107 14240594 + 102005085 AGCD01037806;GBDF01150434;XR_001235364;XR_262140 MODEL 8910084 protein-coding Vwa8 von Willebrand factor A domain containing 8 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog); orofacial cleft (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955518 4351781 4723479 + 102028887 AGCD01067827;AGCD01067828;AGCD01067829;AGCD01067830;AGCD01067831;AGCD01067832;AGCD01067833;AGCD01067834;AGCD01067835;AGCD01067836;GBCB01043083;GBDI01292258;XM_013506956 XP_013362410 MODEL 8708382 protein-coding Thap1 THAP domain containing 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA-templated transcription (ortholog); endothelial cell proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH dystonia (ortholog); genetic disease (ortholog); Multiple mitochondrial dysfunctions syndrome 9B (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955457 13077015 13088406 - 102011739 AGCD01047037;GBCB01074927;XM_005397068;XM_013520673;XR_001236385;XR_001236386;XR_001236387;XR_001236388;XR_001236389;XR_001236390;XR_001236391;XR_001236392 XP_005397125;XP_013376127 MODEL 8844030 protein-coding Pla2g5 phospholipase A2 group V ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN arachidonate secretion (ortholog); leukotriene biosynthetic process (ortholog); low-density lipoprotein particle remodeling (ortholog); ASSOCIATED WITH familial benign fleck retina (ortholog); late-onset retinal degeneration (ortholog); FOUND IN cell surface (ortholog); early phagosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955452 662281 721507 + 102015593 AGCD01043822;AGCD01043823;AGCD01043824;AGCD01043825;AGCD01043826;AGCD01043827;GBDJ01199830;XM_005394670;XM_005394671;XM_005394672;XM_013519728;XM_013519729;XM_013519730 XP_005394727;XP_005394728;XP_005394729;XP_013375182;XP_013375183;XP_013375184 MODEL 8806450 protein-coding Tsr3 TSR3 ribosome maturation factor ENCODES a protein that exhibits rRNA small subunit aminocarboxypropyltransferase activity (ortholog); transferase activity (ortholog); INVOLVED IN enzyme-directed rRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH genetic disease (ortholog) NW_004955442 15881663 15884222 + 102007944 AGCD01037884;GBBH01118537;XM_005391578 XP_005391635 MODEL 8853422 protein-coding Fgf20 fibroblast growth factor 20 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor-receptor interaction (ortholog); INVOLVED IN cell differentiation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); inner ear receptor cell differentiation (ortholog); ASSOCIATED WITH late onset Parkinson's disease (ortholog); Renal Hypodysplasia/Aplasia 2 (ortholog) NW_004955463 528651 536927 + 102010780 AGCD01049488;XM_005398339 XP_005398396 MODEL 8920981 protein-coding Atp13a1 ATPase 13A1 ENCODES a protein that exhibits membrane protein dislocase activity (ortholog); INVOLVED IN extraction of mislocalized protein from ER membrane (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955524 2365605 2378459 + 102016412 AGCD01068811;GBDF01047188;XM_005409647 XP_005409704 MODEL 39132461 snrna U6 U6 spliceosomal RNA 8976207 pseudo LOC102014890 aftiphilin pseudogene NW_004955472 2006793 2009258 - 102014890 AGCD01053429 MODEL 8952952 protein-coding Dmrta1 DMRT like family A1 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male mating behavior (ortholog); ovarian follicle development (ortholog) NW_004955472 11923796 11925127 - 102020002 AGCD01053777;GBDI01136394;XM_013523045 XP_013378499 MODEL 8946950 protein-coding Psmc6 proteasome 26S subunit, ATPase 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of inclusion body assembly (ortholog); regulation of AMPA receptor activity (ortholog); FOUND IN cytosolic proteasome complex (ortholog); inclusion body (ortholog); nucleus (ortholog) NW_004955409 10454210 10474872 - 102009582 AGCD01009472;GBDJ01190316;XM_005376779 XP_005376836 MODEL 8891548 protein-coding Dusp9 dual specificity phosphatase 9 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; FOUND IN cytoplasm (ortholog) NW_004955580 388277 392269 + 102013565 AGCD01075602;AGCD01075603;GBCQ01088638;XM_013509676 XP_013365130 MODEL 39133404 snrna U2 U2 spliceosomal RNA 8987846 protein-coding LOC102022308 olfactory receptor 18-like NW_004955495 593768 600132 - 102022308 AGCD01061641;AGCD01061642;GBDF01256202;XM_013505086 XP_013360540 MODEL 8799405 protein-coding Rec114 REC114 meiotic recombination protein INVOLVED IN meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 10 (ortholog); FOUND IN chromosome (ortholog) NW_004955450 4002734 4076292 - 102023415 AGCD01042453;AGCD01042454;GBDF01155136;XM_005393591;XM_005393592;XM_005393593;XM_005393594 XP_005393648;XP_005393649;XP_005393650;XP_005393651 MODEL 8777558 protein-coding Akap14 A-kinase anchoring protein 14 ENCODES a protein that exhibits protein kinase A binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); sperm fibrous sheath (ortholog) NW_004955534 120603 137227 - 102006952 AGCD01070439;AGCD01070440;GBDF01249690;XM_005410427;XM_013507698 XP_005410484;XP_013363152 MODEL 8738928 protein-coding Adgrl1 adhesion G protein-coupled receptor L1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); G protein-coupled receptor activity (ortholog); latrotoxin receptor activity (ortholog); INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); DEVELOPMENTAL DELAY, BEHAVIORAL ABNORMALITIES, AND NEUROPSYCHIATRIC DISORDERS (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) NW_004955415 32849066 32883628 - 102011653 AGCD01016737;AGCD01016738;GBDK01083473;XM_005381088;XM_005381089;XM_013512288 XP_005381145;XP_005381146;XP_013367742 MODEL 9057942 ncrna LOC102010654 uncharacterized LOC102010654 NW_004955451 2820724 2842826 + 102010654 AGCD01043023;GBDF01304074;XR_262571 MODEL 8853528 protein-coding Khdc4 KH domain containing 4, pre-mRNA splicing factor ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splice site recognition (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 2100440 2120412 - 102012806 AGCD01071884;AGCD01071885;GBDF01049228;XM_005411624;XM_005411625;XM_005411626 XP_005411681;XP_005411682;XP_005411683 MODEL 39133995 misc_rna 7SK 7SK RNA 8860293 ncrna LOC102019842 uncharacterized LOC102019842 NW_004955532 3447498 3450239 - 102019842 AGCD01070280;GBDF01044282;XR_264729 MODEL 39131656 rrna 5S_rRNA 5S ribosomal RNA 8922454 protein-coding Hjurp Holliday junction recognition protein ENCODES a protein that exhibits histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN CENP-A containing chromatin assembly (ortholog); chromosome segregation (ortholog); regulation of protein-containing complex assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); kinetochore (ortholog); nucleolus (ortholog) NW_004955453 2323018 2335090 + 102004349 AGCD01044625;GBDI01285278;XM_005395333 XP_005395390 MODEL 39132592 rrna 5S_rRNA 5S ribosomal RNA 8865501 protein-coding LOC102003363 olfactory receptor 8K5-like NW_004955511 1379800 1390219 + 102003363 AGCD01066366;XM_005407957;XM_005407958;XM_005407959 XP_005408014;XP_005408015;XP_005408016 MODEL 8828839 protein-coding Bdkrb1 bradykinin receptor B1 ENCODES a protein that exhibits bradykinin receptor activity (ortholog); peptide binding (ortholog); INVOLVED IN cell migration (ortholog); cyclooxygenase pathway (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH Diabetes Complications (ortholog); diabetic angiopathy (ortholog); diabetic neuropathy (ortholog) NW_004955438 16500219 16505394 - 102014289 AGCD01035420;GBDJ01390087;XM_005390373 XP_005390430 MODEL 8795745 protein-coding Arsi arylsulfatase family member I ASSOCIATED WITH autism spectrum disorder (ortholog); hereditary spastic paraplegia (ortholog); paraplegia (ortholog) NW_004955415 4234491 4240970 + 102017005 AGCD01015968;GBDK01300795;XM_005380580 XP_005380637 MODEL 8877139 protein-coding Pdcd2 programmed cell death 2 ENCODES a protein that exhibits enzyme binding (ortholog); protein carrier chaperone (ortholog); INVOLVED IN programmed cell death (ortholog); regulation of hematopoietic progenitor cell differentiation (ortholog); ribosomal small subunit biogenesis (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog) NW_004955411 3256612 3262685 + 102010043 AGCD01011544;AGCD01011545;GBBH01209693;XM_013510897 XP_013366351 MODEL 8814179 protein-coding LOC102005867 protein S100-A8 ASSOCIATED WITH Acute Otitis Media NW_004955592 72594 73659 + 102005867 AGCD01076300;GBBH01004217;XM_005414602;XM_013509975 XP_005414659;XP_013365429 MODEL 8975288 protein-coding Hbegf heparin binding EGF like growth factor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); cell migration (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); Cardiotoxicity (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); plasma membrane (ortholog) NW_004955418 259860 321340 + 102005470 AGCD01018670;AGCD01018671;GBDF01303290;XM_005382030;XM_005382031 XP_005382087;XP_005382088 MODEL 8792355 protein-coding Tyro3 TYRO3 protein tyrosine kinase ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); protein tyrosine kinase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); forebrain cell migration (ortholog); natural killer cell differentiation (ortholog); ASSOCIATED WITH 46, XX Disorders of Sex Development (ortholog); hereditary breast ovarian cancer syndrome (ortholog); thrombosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) NW_004955416 8361722 8377629 + 102008407 AGCD01017045;GBCE01008177;GBDI01185356;XM_013512649 XP_013368103 MODEL 8886352 protein-coding Serinc2 serine incorporator 2 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine metabolic process (ortholog); plasma membrane phospholipid scrambling (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 9905152 9914943 + 102008911 AGCD01044263;GBBH01064457;GBDI01080614;XM_013519725 XP_013375179 MODEL 10385484 ncrna LOC106147058 uncharacterized LOC106147058 NW_004955514 2646798 2653474 - 106147058 AGCD01067085;GBDI01324427;XR_001231766;XR_001231767 MODEL 39131795 rrna 5S_rRNA 5S ribosomal RNA 15036854 trna Trnas-gga transfer RNA serine (anticodon GGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978803 8822933 protein-coding Fam178b family with sequence similarity 178 member B NW_004955470 4227356 4303063 - 102024446 AGCD01052729;GBDI01053977;XM_005400687;XM_005400688;XM_013522748;XM_013522749 XP_005400744;XP_005400745;XP_013378202;XP_013378203 MODEL 8737717 protein-coding Trim23 tripartite motif containing 23 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); positive regulation of protein modification process (ortholog); protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); Golgi membrane (ortholog); lysosomal membrane (ortholog) NW_004955446 3480177 3509050 + 102019968 AGCD01040020;AGCD01040021;AGCD01040022;GBDJ01063114;XM_005392627 XP_005392684 MODEL 8939279 protein-coding Gba1 glucosylceramidase beta 1 ENCODES a protein that exhibits beta-glucosidase activity (ortholog); glucosylceramidase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); autophagosome organization (ortholog); autophagy (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH alpha thalassemia-X-linked intellectual disability syndrome (ortholog); Gaucher's disease (ortholog); Gaucher's disease perinatal lethal (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) NW_004955545 1682097 1689373 - 102029796 AGCD01071867;GBDJ01186339;XM_005411586 XP_005411643 MODEL 8811176 protein-coding Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ENCODES a protein that exhibits glucosamine 6-phosphate N-acetyltransferase activity (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glucosamine metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); RHIZOMELIC DYSPLASIA, AIN-NAZ TYPE (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) NW_004955409 10406248 10424431 + 102008703 AGCD01009470;AGCD01009471;GBCQ01095032;XM_005376776;XM_005376777 XP_005376833;XP_005376834 MODEL 9005425 protein-coding LOC102006874 immunoglobulin omega chain-like NW_004955455 6441139 6441749 + 102006874 AGCD01045796;GBDI01034310;XM_005396571 XP_005396628 MODEL 8814128 protein-coding LOC102005087 protein phosphatase 1 regulatory subunit 37 NW_004955555 2117438 2165515 + 102005087 AGCD01073130;AGCD01073131;GBBH01124509;XM_005412493;XM_013508759 XP_005412550;XP_013364213 MODEL 8715614 protein-coding Ap3b1 adaptor related protein complex 3 subunit beta 1 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); cyclic hematopoiesis (ortholog); genetic disease (ortholog); FOUND IN microvesicle (ortholog) NW_004955425 22792616 23051509 + 102015649 AGCD01025833;AGCD01025834;AGCD01025835;AGCD01025836;AGCD01025837;AGCD01025838;GBDF01157461;XM_005386022 XP_005386079 MODEL 39132464 snrna U6 U6 spliceosomal RNA 9013604 pseudo LOC102021290 uncharacterized LOC102021290 NW_004955447 10934204 10968303 + 102021290 AGCD01040895 MODEL 10300371 protein-coding LOC106150037 translation initiation factor IF-2-like NW_004955462 390298 391074 + 106150037 AGCD01049077;GBBH01144866;XM_013521357 XP_013376811 MODEL 9015895 pseudo LOC102024028 serine-rich coiled-coil domain-containing protein 2 pseudogene NW_004955425 25294131 25298646 + 102024028 AGCD01025912;XR_261170 MODEL 8762880 protein-coding Actl6a actin like 6A ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blastocyst formation (ortholog); chromatin remodeling (ortholog); nervous system development (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; INO80 family mediated chromatin remodeling pathway; pancreatic cancer pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); cervical dystonia (ortholog); Developmental Disabilities (ortholog); FOUND IN Ino80 complex (ortholog); npBAF complex (ortholog); NuA4 histone acetyltransferase complex (ortholog) NW_004955420 8745390 8764993 + 102012436 AGCD01020731;AGCD01020732;GBDF01053206;XM_005383042;XM_013513572 XP_005383099;XP_013369026 MODEL 8730835 pseudo LOC102012250 bromodomain-containing protein 7-like NW_004955441 5921864 5922609 - 102012250 AGCD01036892 MODEL 8854344 protein-coding Fgf21 fibroblast growth factor 21 INVOLVED IN cellular response to glucagon stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Cardiomegaly (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN extracellular space (ortholog) NW_004955559 1818400 1821423 - 102004527 AGCD01073671;GBDF01061434;XM_013508993;XM_013508994 XP_013364447;XP_013364448 MODEL 8973560 protein-coding Atp13a2 ATPase cation transporting 13A2 ENCODES a protein that exhibits phosphatidic acid binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); polyamine transmembrane transporter activity (ortholog); INVOLVED IN autophagosome organization (ortholog); autophagosome-lysosome fusion (ortholog); autophagy (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 33 (ortholog); hereditary spastic paraplegia 78 (ortholog); FOUND IN autophagosome (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955527 1805854 1823623 + 102025615 AGCD01069416;GBBH01034047;XM_005409823;XM_005409824 XP_005409880;XP_005409881 MODEL 39134271 misc_rna 7SK 7SK RNA 8764079 protein-coding Tomm40 translocase of outer mitochondrial membrane 40 ENCODES a protein that exhibits monoatomic cation channel activity (ortholog); preprotein binding (ortholog); protein transmembrane transporter activity (ortholog); INVOLVED IN obsolete protein targeting to mitochondrion (ortholog); positive regulation of apoptotic process (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; intermembrane space assembly pathway of mitochondrial protein import; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); cerebral infarction (ortholog); FOUND IN membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog); mitochondrial inner membrane (ortholog) NW_004955555 1987063 1997329 + 102028023 AGCD01073118;AGCD01073119;AGCD01073120;GBBH01087837;GBCE01039145;XM_013508699 XP_013364153 MODEL 8970204 ncrna LOC102009891 uncharacterized LOC102009891 NW_004955444 753602 758219 - 102009891 AGCD01038683;GBDF01111656;XR_001235508 MODEL 8712326 protein-coding Psmd1 proteasome 26S subunit, non-ATPase 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); synaptic vesicle (ortholog) NW_004955453 4314177 4397972 - 102024421 AGCD01044686;AGCD01044687;GBCQ01003438;GBDI01005709;XM_013519960 XP_013375414 MODEL 8861721 pseudo LOC102017895 protein kinase C iota type pseudogene NW_004955501 2865479 2868071 - 102017895 AGCD01064096 MODEL 8898757 protein-coding Insl6 insulin like 6 INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); male gonad development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Hereditary Neoplastic Syndromes (ortholog) NW_004955434 9349033 9355817 - 102029657 AGCD01032299;GBDF01045874;XM_005388656 XP_005388713 MODEL 8858256 protein-coding Cfap410 cilia and flagella associated protein 410 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); axial spondylometaphyseal dysplasia (ortholog); cone dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955407 41120820 41128089 + 102026604 AGCD01007856;GBDF01192997;XM_005375863 XP_005375920 MODEL 8942271 protein-coding Rec8 REC8 meiotic recombination protein INVOLVED IN double-strand break repair via homologous recombination (ortholog); fertilization (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH azoospermia (ortholog); melanoma (ortholog); primary ovarian insufficiency (ortholog); FOUND IN condensed chromosome (ortholog); condensed chromosome, centromeric region (ortholog); condensed nuclear chromosome (ortholog) NW_004955409 36223783 36231749 - 102011511 AGCD01010453;GBCE01171312;XM_013510405;XM_013510406 XP_013365859;XP_013365860 MODEL 9026813 protein-coding Vwc2 von Willebrand factor C domain containing 2 INVOLVED IN negative regulation of BMP signaling pathway (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of cell-substrate adhesion (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) NW_004955456 3949885 4075622 - 102006099 AGCD01046288;GBDI01379282;XM_013520509 XP_013375963 MODEL 9021820 protein-coding Capn2 calpain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); blastocyst development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Anthracycline-induced Cardiotoxicity (ortholog); FOUND IN cell projection (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955520 1287829 1315318 - 102003055 AGCD01068050;GBCQ01012082;GBDK01013075;XM_013507063 XP_013362517 MODEL 8897124 protein-coding Fam180a family with sequence similarity 180 member A ASSOCIATED WITH endometriosis (ortholog); hepatocellular carcinoma (ortholog) NW_004955494 6997706 7009955 + 102008547 AGCD01061545;GBCE01138457;XM_005405471 XP_005405528 MODEL 8765380 protein-coding Dmrta2 DMRT like family A2 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cerebral cortex regionalization (ortholog); dopaminergic neuron differentiation (ortholog); neuron fate specification (ortholog); FOUND IN nucleus (ortholog) NW_004955464 8493392 8498007 + 102028840 AGCD01050088;AGCD01050089;GBBH01118181;GBBH01182835;XM_013521761 XP_013377215 MODEL 8744635 protein-coding Gnptab N-acetylglucosamine-1-phosphate transferase subunits alpha and beta ENCODES a protein that exhibits UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); lysosome organization (ortholog); N-glycan processing to lysosome (ortholog); ASSOCIATED WITH genetic disease (ortholog); glycoproteinosis (ortholog); Legg-Calve-Perthes disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955405 37107902 37136993 - 102003312 AGCD01005440;AGCD01005441;AGCD01005442;GBBH01163569;GBBH01163571;XM_013518708 XP_013374162 MODEL 8978415 protein-coding B3galt4 beta-1,3-galactosyltransferase 4 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog) NW_004955437 1839707 1840516 + 102010630 AGCD01034239;GBBH01117698;GBDF01155737;XM_005390114 XP_005390171 MODEL 39131657 rrna 5S_rRNA 5S ribosomal RNA 39133290 snrna U2 U2 spliceosomal RNA 8913606 ncrna LOC102019510 uncharacterized LOC102019510 NW_004955497 4056191 4062405 + 102019510 AGCD01062564;GBCQ01031347;XR_264203 MODEL 8964661 pseudo LOC102005870 RING finger and transmembrane domain-containing protein 1 pseudogene NW_004955602 483146 483899 - 102005870 AGCD01076788 MODEL 8818045 protein-coding Bdkrb2 bradykinin receptor B2 ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); bradykinin receptor activity (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); arachidonate secretion (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); asthma (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) NW_004955438 16514300 16537160 - 102014608 AGCD01035420;AGCD01035421;GBDJ01225170;XM_005390374;XM_005390375 XP_005390431;XP_005390432 MODEL 8963693 protein-coding LOC102022310 uncharacterized LOC102022310 NW_004955426 23903866 23906254 + 102022310 AGCD01026659;GBCE01080087;XM_005386239;XR_001234325 XP_005386296 MODEL 8913666 protein-coding Thap11 THAP domain containing 11 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell population proliferation (ortholog); electron transport chain (ortholog); gene expression (ortholog); ASSOCIATED WITH methylmalonic aciduria and homocystinuria type cblC (ortholog); Methylmalonic Aciduria and Homocystinuria, cblL Type (ortholog); Spinocerebellar Ataxia 51 (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955484 8857015 8859091 - 102022193 AGCD01058398;GBCQ01010799;XM_005403621 XP_005403678 MODEL 9001158 protein-coding Akap17a A-kinase anchoring protein 17A ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955499 1119658 1130250 + 102025028 AGCD01063321;AGCD01063322;AGCD01063323;GBCB01043489;GBCB01043491;XM_013505618 XP_013361072 MODEL 8929556 protein-coding LOC102017153 acylcarnitine hydrolase-like NW_004955433 23437473 23489212 + 102017153 AGCD01031962;AGCD01031963;AGCD01031964;AGCD01031965;AGCD01031966;AGCD01031967;AGCD01031968;GBDI01046093;XM_013516113 XP_013371567 MODEL 8957417 protein-coding Serinc3 serine incorporator 3 ENCODES a protein that exhibits molecular carrier activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); plasma membrane phospholipid scrambling (ortholog); positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955445 12837616 12868631 + 102018346 AGCD01039763;AGCD01039764;GBDF01003618;XM_005392472 XP_005392529 MODEL 9063130 protein-coding Pla2g6 phospholipase A2 group VI ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); ATP-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); cardiolipin acyl-chain remodeling (ortholog); maternal process involved in female pregnancy (ortholog); PARTICIPATES IN angiotensin II signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Binge Drinking (ortholog); cerebellar hypoplasia (ortholog); FOUND IN extracellular space (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955413 24431592 24482229 - 102015394 AGCD01014367;AGCD01014368;GBBH01227983;XM_005379242;XM_005379243 XP_005379299;XP_005379300 MODEL 8943252 protein-coding Tssc4 tumor suppressing subtransferable candidate 4 ENCODES a protein that exhibits molecular sequestering activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN spliceosomal snRNP assembly (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); U5 snRNP (ortholog) NW_004955422 14175271 14178991 + 102014579 AGCD01022855;GBDF01024714;XM_013514301;XM_013514302 XP_013369755;XP_013369756 MODEL 9049507 trna Trnas-uga transfer RNA serine (anticodon UGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955425;NW_004955465 756793;20176554;13268508 756874;20176635;13268589 +;+;+ 101978804 AGCD01025718;AGCD01050595;AGCD01057629 MODEL 8996536 pseudo LOC102014892 rab GTPase-binding effector protein 1 pseudogene NW_004955415 32517548 32518592 + 102014892 AGCD01016724 MODEL 39133996 misc_rna 7SK 7SK RNA 8797631 protein-coding Dut deoxyuridine triphosphatase ENCODES a protein that exhibits dUTP diphosphatase activity (ortholog); identical protein binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN dTMP biosynthetic process (ortholog); dUMP biosynthetic process (ortholog); dUTP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH Bone Marrow Failure and Diabetes Mellitus Syndrome (ortholog); Brain Neoplasms (ortholog); High Myopia (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 5574810 5584135 - 102012506 AGCD01009319;AGCD01009320;GBDF01000559;XM_005376703;XM_005376704;XM_013510306 XP_005376760;XP_005376761;XP_013365760 MODEL 8853867 ncrna LOC102019844 uncharacterized LOC102019844 NW_004955533 934951 951060 + 102019844 AGCD01070335;GBDK01153925;XR_001232036;XR_001232037;XR_001232038;XR_264743;XR_264744 MODEL 9063767 protein-coding LOC102010656 laminin subunit alpha-3-like NW_004955649 79435 83763 - 102010656 AGCD01077784;AGCD01077785;GBDI01289779;GBDJ01229315;XM_013510173 XP_013365627 MODEL 9025663 protein-coding Adgrl2 adhesion G protein-coupled receptor L2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN excitatory synapse assembly (ortholog); positive regulation of synapse assembly (ortholog); response to bacterium (ortholog); ASSOCIATED WITH microcephaly (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) NW_004955423 11789313 12062478 - 102008638 AGCD01023705;AGCD01023706;AGCD01023707;AGCD01023708;AGCD01023709;AGCD01023710;GBDK01090032;XM_013514474;XM_013514475;XM_013514476;XM_013514477;XM_013514478;XM_013514479;XM_013514480;XM_013514481;XM_013514482;XM_013514483;XM_013514484;XM_013514485 XP_013369928;XP_013369929;XP_013369930;XP_013369931;XP_013369932;XP_013369933;XP_013369934;XP_013369935;XP_013369936;XP_013369937;XP_013369938;XP_013369939 MODEL 8793455 protein-coding LOC102021298 putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8 NW_004956458 3484 4133 + 102021298 AGCD01079630;XM_005415201 XP_005415258 MODEL 39132594 rrna 5S_rRNA 5S ribosomal RNA 8871876 protein-coding Hjv hemojuvelin BMP co-receptor ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); hemochromatosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); BMP receptor complex (ortholog); cell surface (ortholog) NW_004955568 80386 84707 + 102028911 AGCD01074502;GBCB01004263;XM_005413418 XP_005413475 MODEL 8983925 protein-coding LOC102012257 lipopolysaccharide-binding protein NW_004955445 18358717 18389491 - 102012257 AGCD01039903;AGCD01039904;GBDJ01074877;XM_005392536;XR_001235614;XR_001235615;XR_001235616;XR_001235617;XR_262356 XP_005392593 MODEL 8868496 protein-coding Arsj arylsulfatase family member J FOUND IN actin cytoskeleton (ortholog) NW_004955428 25373664 25436251 + 102030219 AGCD01028282;GBCE01179357;XM_005386815 XP_005386872 MODEL 39133299 snrna U2 U2 spliceosomal RNA 8768500 protein-coding Tyrobp transmembrane immune signaling adaptor TYROBP ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); amyloid-beta clearance (ortholog); apoptotic cell clearance (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); liver disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955468 2673657 2677633 + 102015303 AGCD01051831;AGCD01051832;GBDK01012952;XM_005399941;XM_013522542 XP_005399998;XP_013377996 MODEL 8828092 protein-coding Insm1 INSM transcriptional repressor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); cyclin binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal chromaffin cell differentiation (ortholog); cell differentiation (ortholog); endocrine pancreas development (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN nucleus (ortholog); transcription repressor complex (ortholog) NW_004955415 28396176 28398114 + 102010364 AGCD01016641;GBBH01179747;XM_013512134 XP_013367588 MODEL 8773420 pseudo LOC102006876 heterogeneous nuclear ribonucleoprotein D-like pseudogene NW_004955407 20847561 20859445 - 102006876 AGCD01007345 MODEL 8903845 protein-coding Cfap418 cilia and flagella associated protein 418 INVOLVED IN photoreceptor cell morphogenesis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 21 (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 16 (ortholog); FOUND IN ciliary base (ortholog); cytoplasm (ortholog); photoreceptor inner segment (ortholog) NW_004955417 11357367 11381287 - 102004385 AGCD01018130;AGCD01018131;GBCQ01125394;XM_005381829;XM_013512799;XM_013512800;XR_001233445;XR_001233446 XP_005381886;XP_013368253;XP_013368254 MODEL 8821262 protein-coding Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); poly(A) binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of RNA export from nucleus (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); Grb2-Sos complex (ortholog); membrane (ortholog) NW_004955452 10413883 10458518 + 102014204 AGCD01044275;AGCD01044276;GBDF01047207;XM_005395038;XR_001236051;XR_262674 XP_005395095 MODEL 8797517 protein-coding Ap3b2 adaptor related protein complex 3 subunit beta 2 INVOLVED IN adult locomotory behavior (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 48 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN presynapse (ortholog) NW_004955416 13927655 13956589 + 102006659 AGCD01017240;GBDF01019358;XM_005381476;XM_005381477 XP_005381533;XP_005381534 MODEL 8816060 pseudo LOC102024030 E3 ubiquitin-protein ligase Praja-2 pseudogene NW_004955503 7343198 7345404 + 102024030 AGCD01064789 MODEL 9011245 protein-coding Fam180b family with sequence similarity 180 member B NW_004955422 709915 713027 - 102017347 AGCD01022432;GBCB01050245;XM_005383953 XP_005384010 MODEL 39133997 misc_rna 7SK 7SK RNA 8785016 protein-coding Reck reversion inducing cysteine rich protein with kazal motifs ENCODES a protein that exhibits coreceptor activity (ortholog); endopeptidase inhibitor activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN blood vessel maturation (ortholog); canonical Wnt signaling pathway (ortholog); embryo implantation (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); glioblastoma (ortholog); FOUND IN plasma membrane (ortholog); Wnt signalosome (ortholog) NW_004955472 222261 276869 - 102008717 AGCD01053322;AGCD01053323;GBCE01055236;GBDJ01311384;XM_013523013 XP_013378467 MODEL 8916741 protein-coding Actl6b actin like 6B INVOLVED IN chromatin remodeling (ortholog); dendrite development (ortholog); nervous system development (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN nBAF complex (ortholog); nucleus (ortholog); SWI/SNF complex (ortholog) NW_004955573 259133 272043 + 102016961 AGCD01074971;AGCD01074972;GBDF01116752;XM_005413703 XP_005413760 MODEL 8717769 protein-coding Tomm40l translocase of outer mitochondrial membrane 40 like ENCODES a protein that exhibits mitochondrion targeting sequence binding (ortholog); preprotein binding (ortholog); FOUND IN mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955468 12981023 12984999 + 102008304 AGCD01052194;GBCE01159608;XM_005400273;XM_013522479 XP_005400330;XP_013377933 MODEL 8976579 protein-coding Atp13a3 ATPase 13A3 ENCODES a protein that exhibits P-type transmembrane transporter activity (ortholog); ASSOCIATED WITH primary pulmonary hypertension 5 (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); recycling endosome membrane (ortholog) NW_004955420 14295844 14375325 + 102027857 AGCD01020940;AGCD01020941;AGCD01020942;AGCD01020943;GBCB01040232;XM_013513495;XM_013513496;XM_013513497;XM_013513498;XM_013513499;XM_013513500;XM_013513501;XM_013513502;XR_001233745;XR_001233746 XP_013368949;XP_013368950;XP_013368951;XP_013368952;XP_013368953;XP_013368954;XP_013368955;XP_013368956 MODEL 8779851 protein-coding Pdcd2l programmed cell death 2 like NW_004955468 4011644 4027481 + 102004799 AGCD01051880;AGCD01051881;AGCD01051882;GBDF01291975;XM_005400004 XP_005400061 MODEL 39131796 rrna 5S_rRNA 5S ribosomal RNA 8764163 protein-coding Hbp1 HMG-box transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of lipid transport (ortholog); negative regulation of reactive oxygen species biosynthetic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); osteoarthritis (ortholog); FOUND IN nuclear speck (ortholog) NW_004955410 11626743 11652343 + 102005119 AGCD01010829;AGCD01010830;GBDF01118971;XM_005377281;XM_005377282 XP_005377338;XP_005377339 MODEL 10209585 ncrna LOC106147059 uncharacterized LOC106147059 NW_004955514 2691466 2693010 - 106147059 AGCD01067085;GBBH01175162;XR_001231768 MODEL 8971357 protein-coding B3galt5 beta-1,3-galactosyltransferase 5 INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog) NW_004955407 38343581 38393408 + 102027045 AGCD01007804;AGCD01007805;GBDI01381461;XM_005375773;XM_005375774;XM_013504919;XM_013504924 XP_005375830;XP_005375831;XP_013360373;XP_013360378 MODEL 8974849 pseudo LOC102017897 mitochondrial import inner membrane translocase subunit Tim9-like NW_004955506 1117685 1117951 - 102017897 AGCD01065246 MODEL 8865576 protein-coding Gba2 glucosylceramidase beta 2 ENCODES a protein that exhibits beta-glucosidase activity (ortholog); glucosylceramidase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN bile acid metabolic process (ortholog); central nervous system neuron development (ortholog); cholesterol metabolic process (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955472 553556 564411 + 102009042 AGCD01053340;AGCD01053341;GBDI01186476;XM_005401007 XP_005401064 MODEL 8716221 ncrna LOC102012259 uncharacterized LOC102012259 NW_004955402 6847522 6850356 - 102012259 AGCD01000162;GBDF01162294;XR_001235451 MODEL 9046492 ncrna LOC102005088 uncharacterized LOC102005088 NW_004955563 1734092 1737196 - 102005088 AGCD01074160;GBDF01006732;XR_001232369;XR_265018 MODEL 39133110 snrna U2 U2 spliceosomal RNA 15036842 trna Trnastop-cua transfer RNA amber suppressor (anticodon CUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978848 8909077 protein-coding LOC102014895 uncharacterized LOC102014895 NW_004955416 15294596 15300744 - 102014895 AGCD01017317;GBCE01158467;XM_013512422 XP_013367876 MODEL 39134272 misc_rna 7SK 7SK RNA 8764937 protein-coding Pla2g7 phospholipase A2 group VII ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); A2-type glycerophospholipase activity (ortholog); phospholipid binding (ortholog); INVOLVED IN lipid oxidation (ortholog); low-density lipoprotein particle remodeling (ortholog); phosphatidylcholine catabolic process (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog); high-density lipoprotein particle (ortholog); low-density lipoprotein particle (ortholog) NW_004955437 11534251 11577942 - 102008258 AGCD01034575;AGCD01034576;AGCD01034577;AGCD01034578;GBDJ01386258;XM_005389864;XM_005389865;XM_013517097;XM_013517098;XM_013517099 XP_005389921;XP_005389922;XP_013372551;XP_013372552;XP_013372553 MODEL 8936546 protein-coding Fgf22 fibroblast growth factor 22 INVOLVED IN regulation of synapse maturation (ortholog); trans-synaptic signaling (ortholog); FOUND IN cell surface (ortholog); extrinsic component of postsynaptic density membrane (ortholog); GABA-ergic synapse (ortholog) NW_004955495 7099616 7102749 - 102022404 AGCD01062118;XM_005406031 XP_005406088 MODEL 8772269 pseudo LOC102009892 zinc finger CCCH domain-containing protein 15-like NW_004955566 44899 55696 + 102009892 AGCD01074343 MODEL 8887802 protein-coding LOC102003364 olfactory receptor 9I1-like NW_004955511 2907070 2908010 - 102003364 AGCD01066433;AGCD01066434;XM_013506378 XP_013361832 MODEL 9008316 protein-coding Dmrtb1 DMRT like family B with proline rich C-terminal 1 NW_004955464 5719916 5726768 - 102025221 AGCD01050011;AGCD01050012;GBDF01080541;XM_013521575 XP_013377029 MODEL 8826199 ncrna LOC102024032 uncharacterized LOC102024032 NW_004955427 19936159 19952591 + 102024032 AGCD01027389;GBDF01126122;XR_001234392;XR_261282 MODEL 8931080 protein-coding Gnptg N-acetylglucosamine-1-phosphate transferase subunit gamma ENCODES a protein that exhibits protein homodimerization activity (ortholog); UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955442 15870409 15881552 - 102008266 AGCD01037883;AGCD01037884;GBDK01142808;XM_005391579;XM_005391580 XP_005391636;XP_005391637 MODEL 8844817 protein-coding Trim24 tripartite motif containing 24 ENCODES a protein that exhibits chromatin binding (ortholog); estrogen response element binding (ortholog); histone H3K23ac reader activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to estrogen stimulus (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; retinoic acid signaling pathway; ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) NW_004955494 4308924 4421588 - 102009957 AGCD01061494;AGCD01061495;AGCD01061496;AGCD01061497;AGCD01061498;GBBH01187802;GBDI01127792;XM_013504966 XP_013360420 MODEL 8749864 pseudo LOC102019513 L-lactate dehydrogenase B chain pseudogene NW_004955501 4712073 4713040 + 102019513 AGCD01064141 MODEL 8705041 protein-coding Tomm5 translocase of outer mitochondrial membrane 5 PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; FOUND IN mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) NW_004955419 28897328 28900289 + 102006133 AGCD01020479;GBCQ01035619;XM_005382876 XP_005382933 MODEL 8803453 protein-coding LOC102005873 PRAME family member 12-like NW_004955615 256153 258758 + 102005873 AGCD01077252;XM_005414985 XP_005415042 MODEL 10108204 protein-coding LOC106150038 uncharacterized protein C10orf68-like NW_004955462 4646881 4690098 - 106150038 AGCD01049237;AGCD01049238;AGCD01049239;GBDF01049445;XM_013521359 XP_013376813 MODEL 8807547 protein-coding Bdnf brain derived neurotrophic factor ENCODES a protein that exhibits neurotrophin TRKB receptor binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axon target recognition (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ASSOCIATED WITH inner ear disease; acoustic neuroma (ortholog); acute stress disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955476 6773244 6822201 - 102016703 AGCD01055340;AGCD01055341;GBDK01412054;XM_005401751;XM_005401752;XM_005401753;XM_013503014;XM_013503015 XP_005401808;XP_005401809;XP_005401810;XP_013358468;XP_013358469 MODEL 155598685 protein-coding AKAP17A A-kinase anchoring protein 17A 8970769 protein-coding Serinc4 serine incorporator 4 NW_004955416 10255269 10257996 - 102008411 AGCD01017126;GBDF01198361;XM_013512418 XP_013367872 MODEL 8768659 protein-coding Thap12 THAP domain containing 12 FOUND IN nucleus (ortholog) NW_004955414 15539135 15560664 + 102019794 AGCD01015186;AGCD01015187;GBCB01039699;GBDK01238164;XM_005379872 XP_005379929 MODEL 8733057 protein-coding Tssk2 testis specific serine kinase 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); protein autophosphorylation (ortholog); spermatid development (ortholog); FOUND IN acrosomal vesicle (ortholog); centriole (ortholog); cytoplasm (ortholog) NW_004955442 18846491 18847485 - 102012906 AGCD01038022;GBDF01236314;XM_005415367 XP_005415424 MODEL 9012039 protein-coding Vwc2l von Willebrand factor C domain containing 2 like INVOLVED IN negative regulation of BMP signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); extracellular space (ortholog) NW_004955457 1392622 1540314 - 102021522 AGCD01046723;AGCD01046724;AGCD01046725;AGCD01046726;AGCD01046727;GBDF01130103;XM_013520670;XM_013520671 XP_013376124;XP_013376125 MODEL 9020721 pseudo LOC102010667 60S acidic ribosomal protein P2 pseudogene NW_004955453 8336273 8336716 - 102010667 AGCD01044760;XM_005395716 MODEL 39132600 rrna 5S_rRNA 5S ribosomal RNA 39133998 misc_rna 7SK 7SK RNA 9032222 protein-coding Fam181a family with sequence similarity 181 member A FOUND IN cytoplasm (ortholog) NW_004955438 15992016 16001584 + 102008029 AGCD01035391;GBDF01006937;XM_005390352;XM_005390353;XM_005390354;XM_013517234;XM_013517235 XP_005390409;XP_005390410;XP_005390411;XP_013372688;XP_013372689 MODEL 8926856 protein-coding Adgrl3 adhesion G protein-coupled receptor L3 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion mediator activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell-cell adhesion (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Reperfusion Injury (ortholog); FOUND IN axon (ortholog); cell-cell junction (ortholog); glutamatergic synapse (ortholog) NW_004955447 9912679 10708743 - 102017720 AGCD01040866;AGCD01040867;AGCD01040868;AGCD01040869;AGCD01040870;AGCD01040871;AGCD01040872;AGCD01040873;AGCD01040874;AGCD01040875;AGCD01040876;AGCD01040877;AGCD01040878;AGCD01040879;AGCD01040880;AGCD01040881;AGCD01040882;AGCD01040883;AGCD01040884;AGCD01040885;AGCD01040886;AGCD01040887;GBCB01124366;XM_005392854;XM_005392856;XM_005392857;XM_005392859;XM_005392861;XM_005392862;XM_005392863;XM_013518568;XM_013518569;XM_013518570;XM_013518571 XP_005392911;XP_005392913;XP_005392914;XP_005392916;XP_005392918;XP_005392919;XP_005392920;XP_013374022;XP_013374023;XP_013374024;XP_013374025 MODEL 39132465 snrna U6 U6 spliceosomal RNA 8763191 protein-coding Actl7a actin like 7A INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH bladder urothelial carcinoma (ortholog); male infertility (ortholog); spermatogenic failure 86 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955419 18102980 18106405 - 102021767 AGCD01020168;GBDF01005069;XM_005382760 XP_005382817 MODEL 39131797 rrna 5S_rRNA 5S ribosomal RNA 10223540 protein-coding LOC106147060 collagen alpha-1(III) chain-like NW_004955514 1492100 1492656 + 106147060 AGCD01067054;GBCQ01059369;GBDK01283995;XM_013506811 XP_013362265 MODEL 8810044 protein-coding LOC102017156 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 NW_004955435 22646282 22653042 + 102017156 AGCD01033516;GBCE01173521;XM_005389085 XP_005389142 MODEL 8717521 protein-coding Capn3 calpain 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); catalytic activity (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); cellular response to calcium ion (ortholog); cellular response to salt stress (ortholog); ASSOCIATED WITH Autosomal Dominant Limb-Girdle Muscular Dystrophy Type 4 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); myofibril (ortholog) NW_004955416 9070479 9121099 + 102021120 AGCD01017075;AGCD01017076;AGCD01017077;GBCB01004371;XM_005381335;XM_005381338;XM_005381339;XM_005381340;XM_005381342;XM_013512462;XM_013512463;XM_013512464;XM_013512466 XP_005381392;XP_005381395;XP_005381396;XP_005381397;XP_005381399;XP_013367916;XP_013367917;XP_013367918;XP_013367920 MODEL 8808006 protein-coding LOC102006881 uncharacterized protein C2orf78-like NW_004955409 19070835 19072914 - 102006881 AGCD01009855;AGCD01009856;GBDF01127547;GBDF01127548;XM_005377161 XP_005377218 MODEL 8714831 ncrna LOC102019845 uncharacterized LOC102019845 NW_004955538 147301 158216 + 102019845 AGCD01070990;GBBH01172789;XR_264783 MODEL 9039903 protein-coding Tomm6 translocase of outer mitochondrial membrane 6 PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog) NW_004955437 8183219 8184602 + 102015762 AGCD01034480;GBCQ01000051;XM_005389697 XP_005389754 MODEL 10350235 protein-coding Duxb double homeobox B NW_004955510 120981 140525 + 106146973 AGCD01066138;AGCD01066139;GBDF01221746;XM_013506306 XP_013361760 MODEL 39132951 snrna U2 U2 spliceosomal RNA 8945747 protein-coding LOC102012260 eukaryotic translation elongation factor 1 epsilon-1 NW_004955583 253526 254563 - 102012260 AGCD01075808;GBCC01054013;XM_005414299 XP_005414356 MODEL 9018814 protein-coding Psmd10 proteasome 26S subunit, non-ATPase 10 INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of MAPK cascade (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955490 7825202 7832347 + 102014910 AGCD01060265;GBCE01045828;XM_005404680 XP_005404737 MODEL 9029030 ncrna LOC102021300 uncharacterized LOC102021300 NW_004955404 13235320 13236944 - 102021300 AGCD01003481;GBDF01280967;XR_259307 MODEL 8777715 protein-coding Cfap43 cilia and flagella associated protein 43 INVOLVED IN brain development (ortholog); cell morphogenesis (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); normal pressure hydrocephalus (ortholog); oligospermia (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog) NW_004955485 6418063 6515730 + 102013833 AGCD01058619;AGCD01058620;AGCD01058621;GBBH01035016;GBDF01049424;XM_013504069 XP_013359523 MODEL 10263818 pseudo LOC106147061 zinc finger protein 420 pseudogene NW_004955514 1237 4885 - 106147061 AGCD01066991 MODEL 8743066 protein-coding Ap3d1 adaptor related protein complex 3 subunit delta 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN axon (ortholog); endosome membrane (ortholog); glutamatergic synapse (ortholog) NW_004955495 5972177 6012525 + 102018301 AGCD01062045;AGCD01062046;GBDF01051444;XM_005405920;XM_005405921 XP_005405977;XP_005405978 MODEL 8836665 pseudo LOC102003366 protein archease pseudogene NW_004955513 4104178 4104694 + 102003366 AGCD01066919 MODEL 8771651 protein-coding Fgf23 fibroblast growth factor 23 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to interleukin-6 (ortholog); cellular response to leptin stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal dominant hypophosphatemic rickets (ortholog); calcinosis (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular space (ortholog) NW_004955413 2182459 2192279 - 102029842 AGCD01013543;GBCE01069564;XM_005378729 XP_005378786 MODEL 8913573 protein-coding Recql RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); DNA helicase activity (ortholog); DNA/DNA annealing activity (ortholog); INVOLVED IN replication fork processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 17115443 17148708 - 102017214 AGCD01014129;AGCD01014130;GBCQ01179121;XM_005379058;XM_013511493 XP_005379115;XP_013366947 MODEL 8799229 protein-coding Arsk arylsulfatase family member K ENCODES a protein that exhibits arylsulfatase activity (ortholog); glucuronate-2-sulfatase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); mucopolysaccharidosis X (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) NW_004955418 16959736 16989293 - 102016477 AGCD01019139;AGCD01019140;GBDJ01002127;XM_005382245 XP_005382302 MODEL 8860373 protein-coding Hk1 hexokinase 1 ENCODES a protein that exhibits ATP binding (ortholog); D-glucose binding (ortholog); fructokinase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); carbohydrate phosphorylation (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; fructose and mannose metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN caveola (ortholog); cilium (ortholog); cytosol (ortholog) NW_004955437 21733314 21824303 - 102023743 AGCD01034920;AGCD01034921;AGCD01034922;AGCD01034923;GBDK01082320;XM_005390087;XM_005390088;XM_005390089;XM_013517022;XM_013517023 XP_005390144;XP_005390145;XP_005390146;XP_013372476;XP_013372477 MODEL 8743251 pseudo LOC102024033 60S ribosome subunit biogenesis protein NIP7 homolog pseudogene NW_004955428 4681870 4684650 - 102024033 AGCD01027700 MODEL 9062428 protein-coding Vwce von Willebrand factor C and EGF domains ASSOCIATED WITH critical COVID-19 (ortholog); Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955511 6235934 6251186 + 102018755 AGCD01066598;GBCQ01151731;XM_005408169 XP_005408226 MODEL 8836236 protein-coding Dmrtc2 DMRT like family C2 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN heterochromatin organization (ortholog); male meiosis I (ortholog); spermatid nucleus elongation (ortholog); FOUND IN XY body (ortholog) NW_004955555 983451 989044 - 102011917 AGCD01073054;AGCD01073055;GBDK01151937;XM_005412427;XM_013508722;XM_013508723;XM_013508724;XM_013508725;XM_013508726;XM_013508727;XM_013508728 XP_005412484;XP_013364176;XP_013364177;XP_013364178;XP_013364179;XP_013364180;XP_013364181;XP_013364182 MODEL 8756869 protein-coding Pdcd4 programmed cell death 4 INVOLVED IN BMP signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); epithelial to mesenchymal transition involved in cardiac fibroblast development (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Arterial Injury (ortholog); Lung Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955485 530642 553508 - 102013417 AGCD01058452;AGCD01058453;GBCC01022030;XM_005403745;XM_005403747 XP_005403802;XP_005403804 MODEL 9034538 protein-coding Insm2 INSM transcriptional repressor 2 NW_004955409 25584543 25586025 - 102010456 AGCD01010118;GBDF01214949;XM_013510261 XP_013365715 MODEL 8905887 protein-coding Trim25 tripartite motif containing 25 ENCODES a protein that exhibits RIG-I binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to leukemia inhibitory factor (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); ASSOCIATED WITH Joubert syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955451 5918287 5934252 + 102012821 AGCD01043189;AGCD01043190;GBDJ01024909;XM_005394067 XP_005394124 MODEL 8858489 protein-coding Hbq1 hemoglobin subunit theta 1 NW_004955442 17000811 17004033 - 102006290 AGCD01037931;GBBH01050436;XM_005391670;XM_005391671 XP_005391727;XP_005391728 MODEL 8875810 ncrna LOC102019514 uncharacterized LOC102019514 NW_004955427 11862404 11900128 + 102019514 AGCD01027195;AGCD01027196;AGCD01027197;GBCQ01186668;XR_001234347;XR_261253 MODEL 8987364 protein-coding Gbe1 1,4-alpha-glucan branching enzyme 1 ENCODES a protein that exhibits 1,4-alpha-glucan branching enzyme activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); negative regulation of neuron apoptotic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen biosynthetic pathway; glycogen storage disease type III pathway; ASSOCIATED WITH autosomal recessive cutis laxa type IB (ortholog); Familial Cirrhosis with Deposition of Abnormal Glycogen (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN cytosol (ortholog) NW_004955407 10692082 10959236 + 102028159 AGCD01007085;AGCD01007086;AGCD01007087;AGCD01007088;AGCD01007089;AGCD01007090;AGCD01007091;AGCD01007092;GBDI01173668;XM_005375541 XP_005375598 MODEL 10264758 ncrna LOC106150039 uncharacterized LOC106150039 NW_004955462 9394271 9394930 + 106150039 AGCD01049338;XR_001236592 MODEL 8794434 protein-coding Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 ENCODES a protein that exhibits poly(A) binding (ortholog); poly(U) RNA binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH melanoma (ortholog) NW_004955502 1486799 1944298 + 102025140 AGCD01064274;AGCD01064275;AGCD01064276;AGCD01064277;AGCD01064278;AGCD01064279;AGCD01064280;AGCD01064281;AGCD01064282;AGCD01064283;AGCD01064284;AGCD01064285;AGCD01064286;AGCD01064287;GBCQ01021020;XM_005406879 XP_005406936 MODEL 39134273 misc_rna 7SK 7SK RNA 8933989 protein-coding Serinc5 serine incorporator 5 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); molecular carrier activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); myelination (ortholog); phosphatidylserine metabolic process (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); myelin sheath (ortholog) NW_004955418 29502562 29573966 + 102006460 AGCD01019468;AGCD01019469;AGCD01019470;GBBH01115821;GBCB01111527;XM_013513014 XP_013368468 MODEL 9011577 protein-coding Akap19 A-kinase anchoring protein 19 ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 8797416 8847431 - 102003714 AGCD01001889;AGCD01001890;AGCD01001891;AGCD01001892;AGCD01001893;AGCD01001894;AGCD01001895;GBDF01008336;XM_005373308;XM_005373309;XM_005373311 XP_005373365;XP_005373366;XP_005373368 MODEL 39132566 snrna U2 U2 spliceosomal RNA 8931290 protein-coding Gnrh1 gonadotropin releasing hormone 1 ENCODES a protein that exhibits gonadotropin hormone-releasing hormone activity (ortholog); INVOLVED IN estrous cycle (ortholog); female pregnancy (ortholog); male sex determination (ortholog); ASSOCIATED WITH Adrenal Gland Neoplasms (ortholog); adult respiratory distress syndrome (ortholog); amenorrhea (ortholog); FOUND IN axon terminus (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); dendrite (ortholog) NW_004955403 48341731 48346595 - 102022992 AGCD01002917;GBDJ01325795;XM_005373712;XM_013514085 XP_005373769;XP_013369539 MODEL 8707059 protein-coding B3galt6 beta-1,3-galactosyltransferase 6 ENCODES a protein that exhibits galactosylxylosylprotein 3-beta-galactosyltransferase activity (ortholog); UDP-galactosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH Al-Gazali Syndrome (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 1 (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 2 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) NW_004955486 9553765 9555675 - 102029184 AGCD01059190;AGCD01059191;GBDF01304798;XM_013504220 XP_013359674 MODEL 8875763 protein-coding LOC102017899 uncharacterized LOC102017899 NW_004955508 4019743 4057039 - 102017899 AGCD01065855;AGCD01065856;AGCD01065857;AGCD01065858;AGCD01065859;AGCD01065860;GBBH01063497;GBDJ01031312;XM_005407755 XP_005407812 MODEL 8899837 pseudo LOC102005092 golgin subfamily A member 5 pseudogene NW_004955594 631055 633335 - 102005092 AGCD01076436 MODEL 39131658 rrna 5S_rRNA 5S ribosomal RNA 8780653 protein-coding LOC102005876 mRNA cap guanine-N7 methyltransferase-like NW_004956031 668 8233 + 102005876 AGCD01078913;GBDK01394335;XM_013510216 XP_013365670 MODEL 8831461 protein-coding LOC102014899 olfactory receptor 6F1-like NW_004955418 30439364 30440344 + 102014899 AGCD01019519;XM_005382376 XP_005382433 MODEL 15036846 trna Trnastop-uca transfer RNA opal suppressor (anticodon UCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978847 8749578 pseudo LOC102006883 regulator of nonsense transcripts 2 pseudogene NW_004955463 5813626 5816741 + 102006883 AGCD01049644 MODEL 8755021 pseudo LOC102022311 uncharacterized LOC102022311 NW_004955427 19170551 19172121 + 102022311 AGCD01027359 MODEL 8790990 protein-coding Thap2 THAP domain containing 2 FOUND IN nucleolus (ortholog) NW_004955405 11647989 11665110 + 102003723 AGCD01004835;XM_013517628 XP_013373082 MODEL 8923705 protein-coding Pla2r1 phospholipase A2 receptor 1 ENCODES a protein that exhibits phospholipase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN oxidative stress-induced premature senescence (ortholog); positive regulation of arachidonate secretion (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autistic disorder (ortholog); kidney disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); receptor complex (ortholog) NW_004955449 13542458 13653907 + 102028146 AGCD01042138;AGCD01042139;GBCE01188445;XM_005393355 XP_005393412 MODEL 8735079 ncrna LOC102012261 uncharacterized LOC102012261 NW_004955450 975310 979893 + 102012261 AGCD01042346;GBDF01286154;XR_262513 MODEL 8986984 protein-coding LOC102014901 uncharacterized LOC102014901 NW_004955483 773399 806602 + 102014901 AGCD01057630;AGCD01057631;AGCD01057632;GBCQ01152287;XM_013503802 XP_013359256 MODEL 39133999 misc_rna 7SK 7SK RNA 9010277 protein-coding Atp13a4 ATPase 13A4 INVOLVED IN intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH congenital myopathy 1A (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); late endosome membrane (ortholog) NW_004955420 15032370 15179190 + 102008320 AGCD01020962;AGCD01020963;AGCD01020964;AGCD01020965;AGCD01020966;GBDK01071090;XM_005383209 XP_005383266 MODEL 39134274 misc_rna 7SK 7SK RNA 8778548 protein-coding Cfap44 cilia and flagella associated protein 44 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH spermatogenic failure 20 (ortholog) NW_004955427 13497275 13583605 - 102020689 AGCD01027252;AGCD01027253;GBDI01139893;XM_013515054 XP_013370508 MODEL 8875618 protein-coding Tyrp1 tyrosinase related protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); tyrosinase activity (ortholog); INVOLVED IN acetoacetic acid metabolic process (ortholog); eye pigmentation (ortholog); melanin metabolic process (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); genetic disease (ortholog); Lung Neoplasms (ortholog); FOUND IN clathrin-coated endocytic vesicle membrane (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) NW_004955434 15913208 15932193 + 102012890 AGCD01032499;GBDF01054868;XM_005388689 XP_005388746 MODEL 39132466 snrna U6 U6 spliceosomal RNA 9056290 protein-coding Fam181b family with sequence similarity 181 member B NW_004955414 9798441 9800232 + 102009274 AGCD01015034;AGCD01015035;GBBH01201204;XM_005380435 XP_005380492 MODEL 9039399 protein-coding Ap3m1 adaptor related protein complex 3 subunit mu 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); postsynaptic neurotransmitter receptor internalization (ortholog); FOUND IN postsynaptic recycling endosome (ortholog) NW_004955437 17786419 17810678 + 102004202 AGCD01034758;AGCD01034759;AGCD01034760;AGCD01034761;GBDF01261815;XM_005389931 XP_005389988 MODEL 8977845 protein-coding Hk2 hexokinase 2 ENCODES a protein that exhibits ATP binding (ortholog); D-glucose binding (ortholog); fructokinase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); canonical glycolysis (ortholog); carbohydrate phosphorylation (ortholog); PARTICIPATES IN altered carbohydrate metabolic pathway; congenital sucrase-isomaltase deficiency pathway; Fanconi syndrome pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Chronic Intermittent Hypoxia (ortholog); hypertension (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955424 10897528 10966025 - 102019080 AGCD01024535;AGCD01024536;GBCB01019860;XM_005385474 XP_005385531 MODEL 39131799 rrna 5S_rRNA 5S ribosomal RNA 8749502 protein-coding Vwde von Willebrand factor D and EGF domains ASSOCIATED WITH optic atrophy 12 (ortholog) NW_004955432 18687192 18752679 - 102003368 AGCD01031157;AGCD01031158;AGCD01031159;XM_005388152 XP_005388209 MODEL 8758561 protein-coding Actl7b actin like 7B FOUND IN cytoplasm (ortholog) NW_004955419 18106542 18107955 + 102022085 AGCD01020168;GBDF01010361;XM_005382761 XP_005382818 MODEL 8713466 protein-coding Dmtf1 cyclin D binding myb like transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955621 50457 95460 - 102016546 AGCD01077372;AGCD01077373;GBDI01173819;XM_005415012;XM_013510153;XM_013510154;XM_013510155 XP_005415069;XP_013365607;XP_013365608;XP_013365609 MODEL 8763920 ncrna LOC102017904 uncharacterized LOC102017904 NW_004955431 14669607 14678845 - 102017904 AGCD01030337;GBDF01235010;XR_261473 MODEL 8952132 pseudo LOC102009895 DNA damage-regulated autophagy modulator protein 2 pseudogene NW_004955446 16745148 16746679 - 102009895 AGCD01040349 MODEL 8995172 protein-coding Tssk3 testis specific serine kinase 3 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955452 10690847 10693660 + 102022250 AGCD01044288;AGCD01044289;GBBH01077856;GBDF01000050;XM_005395066 XP_005395123 MODEL 8979168 protein-coding Tomm7 translocase of outer mitochondrial membrane 7 INVOLVED IN obsolete positive regulation of protein targeting to mitochondrion (ortholog); positive regulation of type 2 mitophagy (ortholog); regulation of protein stability (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; mitochondrial autophagy pathway; ASSOCIATED WITH GARG-MISHRA PROGEROID SYNDROME (ortholog); FOUND IN mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) NW_004955410 25157860 25166898 - 102009473 AGCD01011144;GBCB01006439;XM_005377383 XP_005377440 MODEL 8935097 protein-coding Hbs1l HBS1 like translational GTPase INVOLVED IN nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH beta thalassemia (ortholog); FOUND IN cytosolic ribosome (ortholog); Dom34-Hbs1 complex (ortholog) NW_004955439 1684466 1762314 + 102003488 AGCD01035625;AGCD01035626;AGCD01035627;GBDF01082932;XM_005390498;XM_013517383 XP_005390555;XP_013372837 MODEL 39132602 rrna 5S_rRNA 5S ribosomal RNA 8940998 protein-coding Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN cell activation involved in immune response (ortholog); COPI coating of Golgi vesicle (ortholog); endoplasmic reticulum-Golgi intermediate compartment organization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH axonal neuropathy (ortholog); cataract 11 multiple types (ortholog); Charcot-Marie-Tooth disease dominant intermediate A (ortholog); FOUND IN cell leading edge (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955485 8006161 8126074 - 102018732 AGCD01058688;AGCD01058689;AGCD01058690;GBCB01020289;XM_005403846;XM_005403847;XM_005403848;XM_005403849;XM_005403850;XM_005403851 XP_005403903;XP_005403904;XP_005403905;XP_005403906;XP_005403907;XP_005403908 MODEL 8810014 protein-coding Hk3 hexokinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); fructokinase activity (ortholog); glucokinase activity (ortholog); INVOLVED IN fructose 6-phosphate metabolic process (ortholog); glucose 6-phosphate metabolic process (ortholog); negative regulation of hydrogen peroxide-mediated programmed cell death (ortholog); PARTICIPATES IN glycolysis pathway; ASSOCIATED WITH liver disease (ortholog); long QT syndrome (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955408 29132717 29149030 - 102016787 AGCD01008738;GBBH01034103;XM_005376399;XM_013509661;XM_013509663;XM_013509667 XP_005376456;XP_013365115;XP_013365117;XP_013365121 MODEL 15036845 trna Trnastop-uua transfer RNA ochre suppressor(anticodon UUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978849 8935988 protein-coding Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); positive regulation of RNA splicing (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955461 9751057 9926211 + 102020536 AGCD01048952;GBCB01041798;GBCE01159678;XM_005398044 XP_005398101 MODEL 8910875 protein-coding Thap3 THAP domain containing 3 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) NW_004955486 6012557 6018101 - 102024574 AGCD01059101;AGCD01059102;GBBH01207080;GBDI01220594;XM_013504317 XP_013359771 MODEL 8940055 protein-coding Akap3 A-kinase anchoring protein 3 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH spermatogenic failure 82 (ortholog); FOUND IN acrosomal vesicle (ortholog); motile cilium (ortholog); sperm fibrous sheath (ortholog) NW_004955413 2411618 2432658 - 102005353 AGCD01013545;AGCD01013546;GBDF01008114;XM_005378739 XP_005378796 MODEL 39131949 snrna U2 U2 spliceosomal RNA 8764487 protein-coding Fgf3 fibroblast growth factor 3 INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of cardiac muscle tissue development (ortholog); organ induction (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Breast Neoplasms (ortholog); cleft lip (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955422 16333363 16339853 + 102016488 AGCD01022895;XM_005384959 XP_005385016 MODEL 8758197 ncrna LOC102012264 uncharacterized LOC102012264 NW_004955403 2898337 2898936 + 102012264 AGCD01001740;GBDJ01216344;XR_259140 MODEL 8941266 protein-coding Bdp1 BDP1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 112 (ortholog); Deafness (ortholog); Hearing Loss (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955575 330683 430269 + 102027917 AGCD01075218;AGCD01075219;AGCD01075220;AGCD01075221;GBDF01178164;XM_005413925;XM_005413926;XM_005413927;XM_005413928;XM_005413930 XP_005413982;XP_005413983;XP_005413984;XP_005413985;XP_005413987 MODEL 8905147 ncrna LOC102017160 uncharacterized LOC102017160 NW_004955536 2781372 2785091 + 102017160 AGCD01070802;GBCB01039543;XR_264763 MODEL 9055277 ncrna LOC102019846 uncharacterized LOC102019846 NW_004955437 21463277 21471941 - 102019846 AGCD01034907;AGCD01034908;GBCE01092338;XR_001235015;XR_001235016;XR_261900 MODEL 8859173 protein-coding Atp13a5 ATPase 13A5 NW_004955420 15200164 15303906 + 102008000 AGCD01020968;GBDJ01180966;XM_005383208 XP_005383265 MODEL 9010386 protein-coding Capn5 calpain 5 INVOLVED IN granulosa cell differentiation (ortholog); luteinization (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); synapse (ortholog) NW_004955414 14652578 14706833 - 102011859 AGCD01015155;GBCE01186015;XM_005379843;XM_005379844;XM_005379845 XP_005379900;XP_005379901;XP_005379902 MODEL 8761417 protein-coding Trim26 tripartite motif containing 26 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955583 303081 325560 - 102013127 AGCD01075810;AGCD01075811;GBCB01073423;GBCE01135032;XM_013509781 XP_013365235 MODEL 8979472 ncrna LOC102021311 uncharacterized LOC102021311 NW_004955407 37939818 37945531 - 102021311 AGCD01007789;XR_259622 MODEL 10348577 ncrna LOC106147062 uncharacterized LOC106147062 NW_004955514 30315 38953 - 106147062 AGCD01066992;GBCE01179789;XR_001231773 MODEL 8764864 protein-coding LOC102005878 RNA-binding protein NOB1-like NW_004957102 190 886 + 102005878 AGCD01080498;XM_005415224 XP_005415281 MODEL 8876101 protein-coding Psmd11 proteasome 26S subunit, non-ATPase 11 INVOLVED IN proteasome assembly (ortholog); regulation of AMPA receptor activity (ortholog); stem cell differentiation (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955481 7364543 7402770 + 102027185 AGCD01057061;AGCD01057062;AGCD01057063;GBDF01050146;XM_005402826;XM_013503426 XP_005402883;XP_013358880 MODEL 9034625 protein-coding Recql4 RecQ like helicase 4 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); bubble DNA binding (ortholog); DNA/DNA annealing activity (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of sister chromatid cohesion (ortholog); pigmentation (ortholog); ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ortholog); Baller-Gerold syndrome (ortholog); breast cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog) NW_004955454 3136097 3142525 - 102012055 AGCD01045057;GBDF01177422;XM_005395909;XM_005395911;XM_005395913 XP_005395966;XP_005395968;XP_005395970 MODEL 8855390 protein-coding Arsl arylsulfatase L ENCODES a protein that exhibits arylsulfatase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); chondrodysplasia punctata (ortholog); Coffin-Siris syndrome 1 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955499 1751663 1773112 - 102012452 AGCD01063383;AGCD01063384;AGCD01063385;GBDK01092445;XM_005406523;XM_005406524 XP_005406580;XP_005406581 MODEL 8832094 protein-coding Pdcd5 programmed cell death 5 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); beta-tubulin binding (ortholog); heparin binding (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); negative regulation of protein folding (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN nucleus (ortholog) NW_004955468 5365137 5372888 - 102003429 AGCD01051964;GBDI01331804;XM_005400088 XP_005400145 MODEL 8728260 protein-coding Cfap45 cilia and flagella associated protein 45 ENCODES a protein that exhibits AMP binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); epithelial cilium movement involved in determination of left/right asymmetry (ortholog); establishment of left/right asymmetry (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); visceral heterotaxy 11 (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal B tubule inner sheath (ortholog) NW_004955468 11672332 11711395 - 102010246 AGCD01052136;AGCD01052137;GBBH01163486;XM_005400181;XM_005400183;XM_013522501 XP_005400238;XP_005400240;XP_013377955 MODEL 39132468 snrna U6 U6 spliceosomal RNA 8865081 protein-coding Insr insulin receptor ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta clearance (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN altered insulin signaling pathway; altered leptin system pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); AIDS Dementia Complex (ortholog); Alzheimer's disease (ortholog); FOUND IN caveola (ortholog); cell body (ortholog); dendrite (ortholog) NW_004955563 1867400 2011845 + 102016857 AGCD01074166;AGCD01074167;GBCB01025012;GBCE01008623;XM_013509165 XP_013364619 MODEL 8865952 protein-coding LOC102019525 melanoma-associated antigen B3-like NW_004955531 780560 788753 + 102019525 AGCD01070011;AGCD01070012;XM_005410136 XP_005410193 MODEL 10119420 protein-coding LOC106150040 translation initiation factor IF-2-like NW_004955406 20155524 20156803 + 106150040 AGCD01006100;GBDF01152766;XM_013521368 XP_013376822 MODEL 39134510 misc_rna 7SK 7SK RNA 8809822 pseudo LOC102010670 ADP-ribosylation factor-like protein 8B pseudogene NW_004955455 5770199 5771659 - 102010670 AGCD01045751 MODEL 8828984 protein-coding Fgf4 fibroblast growth factor 4 INVOLVED IN apoptotic process involved in morphogenesis (ortholog); cartilage condensation (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Pilonidal Sinus (ortholog) NW_004955422 16362418 16364126 + 102016820 AGCD01022896;GBDF01078711;XM_005384960 XP_005385017 MODEL 8915768 protein-coding Serp1 stress associated endoplasmic reticulum protein 1 INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); glucose metabolic process (ortholog); muscle organ morphogenesis (ortholog); FOUND IN cytoplasmic microtubule (ortholog) NW_004955448 1738242 1742807 - 102024738 AGCD01041266;AGCD01041267;GBCB01088573;GBDF01046142;XM_005393009 XP_005393066 MODEL 8854610 protein-coding Bean1 brain expressed associated with NEDD4 1 ASSOCIATED WITH spinocerebellar ataxia 31 (ortholog) NW_004955433 23017335 23059054 + 102015559 AGCD01031952;GBCE01163374;XM_005388509 XP_005388566 MODEL 8713119 ncrna LOC102003369 uncharacterized LOC102003369 NW_004955518 211147 307647 + 102003369 AGCD01067721;AGCD01067722;AGCD01067723;AGCD01067724;AGCD01067725;AGCD01067726;AGCD01067727;GBDF01095069;XR_001231851;XR_001231852 MODEL 8721335 protein-coding Actl8 actin like 8 INVOLVED IN epithelial cell differentiation (ortholog) NW_004955527 1217950 1274453 - 102020702 AGCD01069392;AGCD01069393;AGCD01069394;AGCD01069395;AGCD01069396;GBDF01193552;XM_005409807;XM_005409808 XP_005409864;XP_005409865 MODEL 8938752 protein-coding Tssk4 testis specific serine kinase 4 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); obsolete positive regulation of CREB transcription factor activity (ortholog); FOUND IN motile cilium (ortholog); sperm flagellum (ortholog) NW_004955409 36190182 36191801 - 102008068 AGCD01010450;GBDF01003132;GBDJ01396043;XM_013510407 XP_013365861 MODEL 8976858 protein-coding Adgrl4 adhesion G protein-coupled receptor L4 INVOLVED IN protein-containing complex assembly (ortholog); ASSOCIATED WITH glioblastoma (ortholog); hypertrophic cardiomyopathy (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955423 14395712 14487803 + 102009961 AGCD01023761;GBDK01413276;XM_005385180 XP_005385237 MODEL 39132604 rrna 5S_rRNA 5S ribosomal RNA 8741608 protein-coding Tomm70 translocase of outer mitochondrial membrane 70 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to virus (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN alpha-helical insertion pathway of mitochondrial protein import; beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955427 1874277 1908245 - 102014589 AGCD01026884;GBCE01075536;XM_013515046 XP_013370500 MODEL 8714450 trna Trnat-agu transfer RNA threonine (anticodon AGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978810 AGCD01035275;AGCD01037196;AGCD01050588;AGCD01050597;AGCD01051466;AGCD01051472;AGCD01051842;AGCD01057606;AGCD01071886 MODEL 8739895 pseudo Gnrh2p gonadotropin releasing hormone 2 pseudogene NW_004955415 13970416 13974147 + 102005135 AGCD01016278;XM_005415280 XP_005415337 MODEL 9050442 protein-coding Psmd12 proteasome 26S subunit, non-ATPase 12 INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955478 6536207 6558156 - 102010055 AGCD01055900;GBCB01003349;XM_005402153 XP_005402210 MODEL 9023332 protein-coding B3gat1 beta-1,3-glucuronyltransferase 1 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Prostate Cancer (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955412 35294434 35321873 - 102005242 AGCD01013408;AGCD01013409;GBDJ01307644;XM_005378603;XM_005378604;XM_005378605;XM_005378606;XM_005378607 XP_005378660;XP_005378661;XP_005378662;XP_005378663;XP_005378664 MODEL 8707162 protein-coding Thap4 THAP domain containing 4 ENCODES a protein that exhibits heme binding (ortholog); identical protein binding (ortholog); nitric oxide binding (ortholog); INVOLVED IN nitrate metabolic process (ortholog); tyrosine metabolic process (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955542 192888 217985 + 102006957 AGCD01071461;AGCD01071462;AGCD01071463;AGCD01071464;GBBH01061509;GBDF01047758;XM_013508087 XP_013363541 MODEL 8806182 protein-coding Tysnd1 trypsin like peroxisomal matrix peptidase 1 ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); proteolysis (ortholog); regulation of fatty acid beta-oxidation (ortholog); FOUND IN peroxisome (ortholog) NW_004955437 21094831 21105495 + 102025842 AGCD01034896;AGCD01034897;GBCE01070028;GBDF01127607;XM_013516961 XP_013372415 MODEL 8737574 protein-coding Fam184a family with sequence similarity 184 member A ASSOCIATED WITH epilepsy (ortholog); substance-related disorder (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); P-body (ortholog) NW_004955436 1669200 1761908 - 102011582 AGCD01033585;AGCD01033586;AGCD01033587;GBDF01125366;GBDI01168305;XM_005389127;XM_005389128;XM_013516641;XM_013516642 XP_005389184;XP_005389185;XP_013372095;XP_013372096 MODEL 9031653 protein-coding LOC102005097 beta-defensin 8-like NW_004955403 53669665 53672863 + 102005097 AGCD01003067;GBDK01012916;XM_005373835 XP_005373892 MODEL 8740091 pseudo LOC102017162 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 pseudogene NW_004955437 21150063 21151074 - 102017162 AGCD01034900 MODEL 8798371 protein-coding Ap3m2 adaptor related protein complex 3 subunit mu 2 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); synaptic vesicle endocytosis (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synaptic vesicle (ortholog) NW_004955536 767470 900268 - 102010629 AGCD01070739;AGCD01070740;AGCD01070741;AGCD01070742;AGCD01070743;AGCD01070744;GBCE01183162;XM_005410517;XM_005410518;XM_005410519;XM_005410520 XP_005410574;XP_005410575;XP_005410576;XP_005410577 MODEL 8852667 protein-coding Vwf von Willebrand factor ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); blood coagulation (ortholog); cell adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955413 3672470 3825588 - 102010886 AGCD01013578;AGCD01013579;AGCD01013580;AGCD01013581;AGCD01013582;AGCD01013583;AJ238385;GBDK01001413;XM_005378754;XM_005378755 CAB86185;XP_005378811;XP_005378812 MODEL 8820249 ncrna LOC102006884 uncharacterized LOC102006884 NW_004955464 10682579 10683956 - 102006884 AGCD01050127;GBCE01067008;XR_001236703;XR_001236704 MODEL 8999798 protein-coding LOC102022318 olfactory receptor 4A16-like NW_004955511 116700 117623 - 102022318 AGCD01066320;XM_005408177 XP_005408234 MODEL 39134000 misc_rna 7SK 7SK RNA 8909214 protein-coding LOC102024035 acyl-CoA desaturase 1-like NW_004955507 6193698 6208835 + 102024035 AGCD01065697;XM_005407697;XM_005407698 XP_005407754;XP_005407755 MODEL 8799017 protein-coding LOC102006887 putative olfactory receptor 2W6 NW_004955465 13466321 13483771 + 102006887 AGCD01050609;AGCD01050610;AGCD01050611;GBDF01209454;XM_005399013;XM_013521796 XP_005399070;XP_013377250 MODEL 9019618 protein-coding Fgf5 fibroblast growth factor 5 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); glial cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); familial isolated trichomegaly (ortholog) NW_004955433 4521566 4540672 + 102025037 AGCD01031469;AGCD01031470;XM_005388218;XM_013516118 XP_005388275;XP_013371572 MODEL 8776221 protein-coding Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) ENCODES a protein that exhibits globoside alpha-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN globoside metabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog) NW_004955513 2426623 2438019 - 102008134 AGCD01066880;GBBH01122771;XM_005408414;XM_005408415;XM_005408417;XM_013506552 XP_005408471;XP_005408472;XP_005408474;XP_013362006 MODEL 39131800 rrna 5S_rRNA 5S ribosomal RNA 8857651 protein-coding Recql5 RecQ like helicase 5 ENCODES a protein that exhibits DNA helicase activity (ortholog); helicase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to camptothecin (ortholog); cellular response to xenobiotic stimulus (ortholog); chromosome separation (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955506 6574802 6612763 + 102015425 AGCD01065432;GBDI01137109;XM_005407490;XM_005407491 XP_005407547;XP_005407548 MODEL 8724020 ncrna LOC102012268 uncharacterized LOC102012268 NW_004955403 25880625 25907260 + 102012268 AGCD01002295;GBDF01251079;XR_001233582;XR_001233583;XR_259202 MODEL 8853043 pseudo LOC102019847 monocyte to macrophage differentiation factor pseudogene NW_004955539 816214 816756 - 102019847 AGCD01071193 MODEL 8972985 protein-coding Art1 ADP-ribosyltransferase 1 ENCODES a protein that exhibits NAD+ poly-ADP-ribosyltransferase activity (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) NW_004955414 19465969 19487859 + 102007540 AGCD01015318;AGCD01015319;AGCD01015320;AGCD01081640;GBCB01020800;XM_005380024;XM_005380025 XP_005380081;XP_005380082 MODEL 8889435 protein-coding Psmd13 proteasome 26S subunit, non-ATPase 13 INVOLVED IN meiosis I (ortholog); regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955476 11782461 11794839 - 102029619 AGCD01055474;GBDJ01072396;XM_005401886 XP_005401943 MODEL 8985118 protein-coding Plaa phospholipase A2 activating protein ENCODES a protein that exhibits phospholipase A2 activator activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); inflammatory response (ortholog); macroautophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); Inflammation (ortholog); Neurodevelopmental Disorder with Progressive Microcephaly, Spasticity, and Brain Anomalies (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ubiquitin ligase complex (ortholog); cytosol (ortholog) NW_004955472 7879196 7915040 + 102027635 AGCD01053633;AGCD01053634;AGCD01053635;GBCE01084855;XM_005401157 XP_005401214 MODEL 10225408 ncrna LOC106150041 uncharacterized LOC106150041 NW_004955462 2873492 2875878 - 106150041 AGCD01049189;GBBH01049625;XR_001236595;XR_001236596 MODEL 8750112 protein-coding Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ENCODES a protein that exhibits ADP binding (ortholog); ankyrin binding (ortholog); ATP binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); intracellular potassium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); Charcot-Marie-Tooth Disease Type 2A2 (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955435 19537224 19563631 + 102029786 AGCD01033432;AGCD01033433;GBDJ01021062;XM_005389040 XP_005389097 MODEL 9066505 protein-coding Trim27 tripartite motif containing 27 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); innate immune response (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); nuclear membrane (ortholog) NW_004955465 13891001 13902767 - 102008834 AGCD01050633;GBCE01076355;GBCE01076358;XM_013521856 XP_013377310 MODEL 8881952 protein-coding LOC102009896 transmembrane protease serine 11F NW_004955447 4757521 4834971 + 102009896 AGCD01040733;GBDF01305457;XM_005392827 XP_005392884 MODEL 8897035 protein-coding Capn6 calpain 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); regulation of cytoskeleton organization (ortholog); ASSOCIATED WITH hypertension (ortholog); prostate cancer (ortholog); FOUND IN microtubule (ortholog); perinuclear region of cytoplasm (ortholog); spindle microtubule (ortholog) NW_004955490 4499888 4526060 + 102005385 AGCD01060188;GBDF01112329;XM_005404646 XP_005404703 MODEL 39134275 misc_rna 7SK 7SK RNA 8990128 protein-coding LOC102014902 N-acetyllactosaminide alpha-1,3-galactosyltransferase-like NW_004955419 6485685 6557704 + 102014902 AGCD01019859;GBBH01150350;XM_013513229;XM_013513230;XM_013513231;XM_013513232;XM_013513233;XM_013513234 XP_013368683;XP_013368684;XP_013368685;XP_013368686;XP_013368687;XP_013368688 MODEL 9004477 protein-coding Actmap actin maturation protease ENCODES a protein that exhibits cysteine-type aminopeptidase activity (ortholog); initiator methionyl aminopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog) NW_004955578 590202 596846 + 102006966 AGCD01075489;GBDI01000116;XM_005414025;XR_001232466;XR_265085;XR_265086 XP_005414082 MODEL 8986360 protein-coding Akap4 A-kinase anchoring protein 4 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); establishment of protein localization (ortholog); flagellated sperm motility (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Asthenozoospermia (ortholog); male infertility (ortholog); Teratozoospermia (ortholog); FOUND IN cilium (ortholog); motile cilium (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955543 1358086 1367838 + 102016520 AGCD01071620;AGCD01071621;GBDF01006503;XM_005411352 XP_005411409 MODEL 8801573 protein-coding Dvl1 dishevelled segment polarity protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); frizzled binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); DiGeorge syndrome (ortholog); FOUND IN axon (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955486 9464390 9469984 + 102024343 AGCD01059187;GBBH01061708;GBBH01061716;XM_013504189 XP_013359643 MODEL 8968573 trna Trnat-cgu transfer RNA threonine (anticodon CGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955442;NW_004955465;NW_004955465;NW_004955481 4512289;13846174;13285428;6565067 4512360;13846247;13285500;6565138 -;+;+;+ 101978813 AGCD01037528;AGCD01050597;AGCD01050627;AGCD01057031 MODEL 8897309 protein-coding Pdcd6 programmed cell death 6 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to heat (ortholog); COPII vesicle coating (ortholog); FOUND IN COPII vesicle coat (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955504 75378 94654 + 102018202 AGCD01064814;GBDF01118861;XM_005406987;XM_005406988;XM_005406990;XM_005406991 XP_005407044;XP_005407045;XP_005407047;XP_005407048 MODEL 8947534 protein-coding Dmtn dematin actin binding protein ENCODES a protein that exhibits actin binding (ortholog); signaling receptor binding (ortholog); spectrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cellular response to cAMP (ortholog); FOUND IN actin filament (ortholog); cell projection membrane (ortholog); cortical cytoskeleton (ortholog) NW_004955403 45566180 45579062 + 102015273 AGCD01002822;AGCD01002823;GBBH01142552;GBDF01262834;XM_005373902 XP_005373959 MODEL 8763927 protein-coding LOC102017908 metallothionein-1E NW_004955433 14376480 14378539 + 102017908 AGCD01031721;AY533220;GBDF01120895;XM_005388357 AAS59423;XP_005388414 MODEL 8991575 protein-coding Thap5 THAP domain containing 5 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN negative regulation of cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 12808700 12814915 - 102012838 AGCD01010872;GBDF01221249;XM_005377310 XP_005377367 MODEL 8898200 protein-coding Cfap46 cilia and flagella associated protein 46 ASSOCIATED WITH visceral heterotaxy (ortholog); visceral heterotaxy 5 (ortholog) NW_004955477 10412774 10517415 - 102014135 AGCD01055695;AGCD01055696;AGCD01055697;AGCD01055698;AGCD01055699;AGCD01055700;AGCD01055701;GBCE01169122;XM_013503028;XM_013503030;XM_013503031;XM_013503032;XR_001230822 XP_013358482;XP_013358484;XP_013358485;XP_013358486 MODEL 8777679 protein-coding Insrr insulin receptor related receptor ENCODES a protein that exhibits transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to alkaline pH (ortholog); male sex determination (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN receptor complex (ortholog) NW_004955545 2911691 2928335 - 102013450 AGCD01071929;AGCD01071930;GBCQ01038964;XM_013508211;XM_013508212;XM_013508213;XM_013508214;XM_013508215;XM_013508216 XP_013363665;XP_013363666;XP_013363667;XP_013363668;XP_013363669;XP_013363670 MODEL 39134511 misc_rna 7SK 7SK RNA 8878731 protein-coding LOC102010672 uncharacterized LOC102010672 NW_004955456 8615945 8618802 + 102010672 AGCD01046495;AGCD01046496;GBDJ01224884;XM_013520516 XP_013375970 MODEL 9030226 protein-coding Hcar1 hydroxycarboxylic acid receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of lipid catabolic process (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955482 5998796 6002093 + 102028194 AGCD01057363;GBDK01125244;XM_005403075 XP_005403132 MODEL 9040004 ncrna LOC102021315 uncharacterized LOC102021315 NW_004955408 24229582 24231940 - 102021315 AGCD01008604;GBDF01157222;XR_001232408;XR_001232409;XR_259709 MODEL 10187384 ncrna LOC106147063 uncharacterized LOC106147063 NW_004955408 31085631 31093142 + 106147063 AGCD01008821;XR_001231774 MODEL 8812332 protein-coding Ap3s1 adaptor related protein complex 3 subunit sigma 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN AP-3 adaptor complex (ortholog); membrane (ortholog); synaptic vesicle (ortholog) NW_004955408 35621062 35680620 + 102025088 AGCD01008957;AGCD01008958;AGCD01008959;AGCD01008960;GBDF01005589;XM_005376529;XM_005376530 XP_005376586;XP_005376587 MODEL 9018196 protein-coding Khk ketohexokinase ENCODES a protein that exhibits ATP binding (ortholog); fructose binding (ortholog); identical protein binding (ortholog); INVOLVED IN fructose catabolic process (ortholog); fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate (ortholog); fructose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH carbohydrate metabolic disorder (ortholog); essential fructosuria (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955469 9058095 9071091 + 102019905 AGCD01052488;AGCD01052489;GBCB01043782;XM_005400453;XM_005400454;XM_005400455;XM_013522609;XM_013522610 XP_005400510;XP_005400511;XP_005400512;XP_013378063;XP_013378064 MODEL 10366263 ncrna LOC106150042 uncharacterized LOC106150042 NW_004955462 7321314 7324829 - 106150042 AGCD01049300;XR_001236597 MODEL 10141913 protein-coding Serpina10 serpin family A member 10 INVOLVED IN liver regeneration (ortholog); regulation of acrosome reaction (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH Liver Metastasis (ortholog); nephrotic syndrome type 5 (ortholog); small intestine carcinoid neuroendocrine tumor (ortholog) NW_004955438 16335201 16345093 - 106149168 AGCD01035404;AGCD01035405;XM_013517250;XM_013517251 XP_013372704;XP_013372705 MODEL 8750732 protein-coding Becn1 beclin 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); autophagosome assembly (ortholog); autophagosome maturation (ortholog); PARTICIPATES IN autophagy pathway; inositol metabolic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute necrotizing pancreatitis (ortholog); alcohol-associated liver disease (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog) NW_004955451 16616595 16625731 - 102024414 AGCD01043696;GBCQ01005143;XM_005394481;XM_013519257 XP_005394538;XP_013374711 MODEL 39131429 protein-coding TSSK4 testis specific serine kinase 4 39132611 rrna 5S_rRNA 5S ribosomal RNA 39132470 snrna U6 U6 spliceosomal RNA 8701229 protein-coding Capn7 calpain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); MIT domain binding (ortholog); INVOLVED IN positive regulation of epithelial cell migration (ortholog); proteolysis (ortholog); self proteolysis (ortholog) NW_004955430 2269274 2307801 - 102014700 AGCD01029162;GBBH01149851;GBDF01192466;XM_005387313 XP_005387370 MODEL 8815616 protein-coding Tonsl tonsoku like, DNA repair protein ENCODES a protein that exhibits histone binding (ortholog); histone reader activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); protein localization to chromatin (ortholog); replication fork processing (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN DNA replication factor A complex (ortholog); FACT complex (ortholog); MCM complex (ortholog) NW_004955454 3054727 3067785 - 102006630 AGCD01045050;GBBH01121727;XM_005395889;XM_005395890;XM_013520284;XM_013520285 XP_005395946;XP_005395947;XP_013375738;XP_013375739 MODEL 8846876 protein-coding B3gat2 beta-1,3-glucuronyltransferase 2 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN carbohydrate biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Barrett's esophagus (ortholog); schizophrenia (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955488 5866148 5926567 - 102029299 AGCD01059637;AGCD01059638;AGCD01059639;AGCD01059640;AGCD01059641;AGCD01059642;GBDJ01044362;XM_005404478 XP_005404535 MODEL 8983288 protein-coding Gns glucosamine (N-acetyl)-6-sulfatase ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); N-acetylglucosamine-6-sulfatase activity (ortholog); sulfate binding (ortholog); INVOLVED IN heparan sulfate proteoglycan catabolic process (ortholog); keratan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); mucopolysaccharidosis III (ortholog); mucopolysaccharidosis type IIID (ortholog); FOUND IN azurophil granule (ortholog); lysosome (ortholog) NW_004955458 11471376 11500793 - 102022365 AGCD01047751;GBBH01034306;GBDI01070476;XM_005397447 XP_005397504 MODEL 8990233 protein-coding LOC102019527 IQ domain-containing protein F5-like NW_004955532 3445260 3445766 + 102019527 AGCD01070280;GBDF01010020;XM_005410323 XP_005410380 MODEL 8753930 ncrna LOC102005104 uncharacterized LOC102005104 NW_004955405 37762470 37765454 + 102005104 AGCD01005459;GBDF01250665;XR_001236112 MODEL 9053574 ncrna LOC102017163 uncharacterized LOC102017163 NW_004955439 21098027 21098747 - 102017163 AGCD01036138;GBDF01010452;XR_261998 MODEL 8975352 protein-coding Fam184b family with sequence similarity 184 member B ASSOCIATED WITH substance-related disorder (ortholog) NW_004955480 6448130 6552071 + 102007767 AGCD01056684;AGCD01056685;AGCD01056686;GBCB01129730;XM_005402494 XP_005402551 MODEL 8823121 pseudo LOC102003373 bile acid receptor-like NW_004955435 18126734 18135541 + 102003373 AGCD01033389;AGCD01033390 MODEL 8842186 protein-coding LOC102005879 keratin, type I cytoskeletal 42-like NW_004955451 15945587 15951095 - 102005879 AGCD01043641;GBBH01099405;XM_005394414 XP_005394471 MODEL 8989657 protein-coding Hkdc1 hexokinase domain containing 1 ENCODES a protein that exhibits glucokinase activity (ortholog); INVOLVED IN glucose 6-phosphate metabolic process (ortholog); intracellular glucose homeostasis (ortholog); ASSOCIATED WITH Dwarfism (ortholog); Keratoconus 1 (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); photoreceptor inner segment (ortholog) NW_004955437 21825647 21873698 - 102024505 AGCD01034923;AGCD01034924;GBCQ01101008;XM_005390090;XM_013516940 XP_005390147;XP_013372394 MODEL 8771443 protein-coding Vxn vexin INVOLVED IN neurogenesis (ortholog); neuron differentiation (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) NW_004955444 12659894 12684919 - 102016529 AGCD01039078;GBCQ01140368;XM_005392150;XM_005392151;XM_005392152 XP_005392207;XP_005392208;XP_005392209 MODEL 39131951 snrna U2 U2 spliceosomal RNA 9026843 protein-coding Plaat1 phospholipase A and acyltransferase 1 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); peroxisome organization (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope lumen (ortholog); nucleus (ortholog) NW_004955420 15305901 15326444 - 102008629 AGCD01020968;GBBH01131778;XM_005383210;XM_005383211 XP_005383267;XP_005383268 MODEL 8996746 protein-coding Psmd14 proteasome 26S subunit, non-ATPase 14 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); K63-linked deubiquitinase activity (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); protein K63-linked deubiquitination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); autistic disorder (ortholog); Disease Progression (ortholog); FOUND IN cytosolic proteasome complex (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) NW_004955449 12306026 12400908 - 102023649 AGCD01042111;AGCD01042112;GBDF01082613;XM_005393338;XM_005393340 XP_005393395;XP_005393397 MODEL 8886399 protein-coding LOC102009898 prolactin-like NW_004955576 934768 939343 + 102009898 AGCD01075348;XM_013509612 XP_013365066 MODEL 39134136 misc_rna 7SK 7SK RNA 9000470 protein-coding LOC102024037 olfactory receptor 140-like NW_004955511 175875 177677 + 102024037 AGCD01066321;XM_005407938 XP_005407995 MODEL 9030372 pseudo LOC102006890 small ubiquitin-related modifier 2 pseudogene NW_004955412 9882267 9886715 + 102006890 AGCD01012749 MODEL 8768297 protein-coding Tyw2 tRNA wybutosine-synthesizing protein 2 NW_004955540 3121570 3124371 + 102007152 AGCD01071335;GBDJ01260504;XM_005410940 XP_005410997 MODEL 8740987 protein-coding Gbp5 guanylate binding protein 5 ENCODES a protein that exhibits GTPase activity (ortholog); identical protein binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH celiac disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog) NW_004955423 4914430 4926850 + 102011782 AGCD01023549;AGCD01023550;GBDJ01022960;XM_005385098 XP_005385155 MODEL 9005946 protein-coding Akap5 A-kinase anchoring protein 5 ENCODES a protein that exhibits actin binding (ortholog); adenylate cyclase binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amylase secretion (ortholog); calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); COVID-19 (ortholog); FOUND IN asymmetric synapse (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955466 5411190 5422043 - 102029603 AGCD01050879;AGCD01050880;AGCD01050881;GBDJ01123085;XM_005399128;XM_005399129 XP_005399185;XP_005399186 MODEL 15036855 trna Trnat-ggu transfer RNA threonine (anticodon GGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978811 8792106 pseudo LOC102019848 40S ribosomal protein S23 pseudogene NW_004955438 13818383 13818826 + 102019848 AGCD01035313 MODEL 39131801 rrna 5S_rRNA 5S ribosomal RNA 8735055 protein-coding Capn8 calpain 8 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); ASSOCIATED WITH celiac disease (ortholog) NW_004955520 1340038 1379765 + 102012235 AGCD01068051;AGCD01068052;AGCD01068053;GBCQ01188455;XM_005409235 XP_005409292 MODEL 8936476 protein-coding Dmwd DM1 locus, WD repeat containing ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955574 237616 244207 - 102019970 AGCD01075093;GBCE01076103;GBDF01010547;XM_013509517 XP_013364971 MODEL 8983859 protein-coding Thap6 THAP domain containing 6 FOUND IN microtubule cytoskeleton (ortholog) NW_004955474 1481669 1491904 + 102008937 AGCD01054256;GBDF01081168;XM_005401316 XP_005401373 MODEL 8935405 protein-coding LOC102019530 olfactory receptor 2A12-like NW_004955537 2642133 2772590 - 102019530 AGCD01070933;AGCD01070934;AGCD01070935;AGCD01070936;AGCD01070937;AGCD01070938;GBDF01080801;GBDF01080802;XM_005410629 XP_005410686 MODEL 8766476 protein-coding LOC102017911 butyrophilin-like protein 1 NW_004955437 927041 935952 - 102017911 AGCD01034174;AGCD01034175;GBCQ01010671;XM_013516773 XP_013372227 MODEL 39133873 misc_rna 7SK 7SK RNA 8728018 protein-coding Fgf6 fibroblast growth factor 6 INVOLVED IN cartilage condensation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); myoblast differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); prostate carcinoma in situ (ortholog); FOUND IN sarcolemma (ortholog) NW_004955413 2246965 2257883 - 102030404 AGCD01013544;GBCB01049049;XM_005378730 XP_005378787 MODEL 8765037 ncrna LOC102014903 uncharacterized LOC102014903 NW_004955484 8686093 8701788 - 102014903 AGCD01058394;GBDF01075319;XR_001231043;XR_263896 MODEL 8865222 protein-coding LOC102021317 granzyme B-like NW_004955409 35631253 35633975 + 102021317 AGCD01010427;GBDJ01147919;XM_005376985 XP_005377042 MODEL 8831700 protein-coding Khnyn KH and NYN domain containing NW_004955409 35871214 35880233 - 102025660 AGCD01010435;GBBH01092218;XM_005376998;XM_005376999;XR_001232667 XP_005377055;XP_005377056 MODEL 9005600 ncrna LOC102012270 uncharacterized LOC102012270 NW_004955451 13227860 13233237 + 102012270 AGCD01043462;GBDK01199688;XR_262601 MODEL 8705616 protein-coding Redic1 regulator of DNA class I crossover intermediates 1 ASSOCIATED WITH spermatogenic failure (ortholog) NW_004955505 676988 763746 - 102029312 AGCD01064961;GBDF01155084;XM_005407103;XM_005407106;XM_013505952;XM_013505953;XM_013505954;XM_013505955;XM_013505956 XP_005407160;XP_005407163;XP_013361406;XP_013361407;XP_013361408;XP_013361409;XP_013361410 MODEL 9016936 protein-coding Dvl2 dishevelled segment polarity protein 2 ENCODES a protein that exhibits frizzled binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); convergent extension involved in neural plate elongation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH dextro-looped transposition of the great arteries (ortholog); FOUND IN apical part of cell (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955467 9675912 9683996 + 102027735 AGCD01051521;GBDF01125281;XM_005399545;XM_005399546 XP_005399602;XP_005399603 MODEL 8714882 protein-coding Pdcd6ip programmed cell death 6 interacting protein ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein dimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actomyosin contractile ring assembly (ortholog); bicellular tight junction assembly (ortholog); extracellular exosome biogenesis (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); primary autosomal recessive microcephaly 29 (ortholog); FOUND IN actomyosin (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955421 1034843 1109637 + 102022707 AGCD01021587;AGCD01021588;GBDI01120341;XM_005383657;XM_005383658 XP_005383714;XP_005383715 MODEL 8715599 protein-coding B3gat3 beta-1,3-glucuronyltransferase 3 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); genetic disease (ortholog); Larsen-like syndrome B3GAT3 type (ortholog); FOUND IN cis-Golgi network (ortholog); Golgi apparatus (ortholog) NW_004955599 573982 578032 + 102015263 AGCD01076660;GBDK01069802;XM_005414790 XP_005414847 MODEL 8830585 protein-coding Art3 ADP-ribosyltransferase 3 (inactive) NW_004955433 743631 850612 + 102009534 AGCD01031336;AGCD01031337;AGCD01031338;AGCD01031339;GBDF01010282;XM_005388166;XM_005388167;XM_005388168;XM_005388169;XM_005388170;XM_005388171;XM_005388172;XM_005388173;XM_005388174;XM_005388175;XM_005388176;XM_005388177;XM_013516261;XM_013516262;XM_013516263;XM_013516264;XM_013516265 XP_005388223;XP_005388224;XP_005388225;XP_005388226;XP_005388227;XP_005388228;XP_005388229;XP_005388230;XP_005388231;XP_005388232;XP_005388233;XP_005388234;XP_013371715;XP_013371716;XP_013371717;XP_013371718;XP_013371719 MODEL 39134446 misc_rna 7SK 7SK RNA 9057518 protein-coding Adgrv1 adhesion G protein-coupled receptor V1 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); autosomal recessive nonsyndromic deafness (ortholog); beta-mannosidosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); periciliary membrane compartment (ortholog) NW_004955418 20603323 21039891 - 102025794 AGCD01019240;AGCD01019241;AGCD01019242;AGCD01019243;AGCD01019244;AGCD01019245;AGCD01019246;AGCD01019247;AGCD01019248;AGCD01019249;AGCD01019250;AGCD01019251;AGCD01081641;GBBH01228156;GBCQ01099833;XM_013512957 XP_013368411 MODEL 8780240 ncrna LOC102019849 uncharacterized LOC102019849 NW_004955542 1288537 1297016 - 102019849 AGCD01071501;GBDF01143441;XR_264851 MODEL 8960987 protein-coding Hcar2 hydroxycarboxylic acid receptor 2 ENCODES a protein that exhibits nicotinic acid receptor activity (ortholog); INVOLVED IN negative regulation of lipid catabolic process (ortholog); neutrophil apoptotic process (ortholog); positive regulation of adiponectin secretion (ortholog); ASSOCIATED WITH Flushing (ortholog); psoriasis (ortholog); schizophrenia (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog) NW_004955482 6007307 6009353 + 102028861 AGCD01057364;GBBH01173042;XM_005415327 XP_005415384 MODEL 8699530 pseudo LOC102003375 mortality factor 4-like protein 1 pseudogene NW_004955532 142317 143401 + 102003375 AGCD01070101 MODEL 39131423 protein-coding AP3S2 adaptor related protein complex 3 subunit sigma 2 8930203 protein-coding Begain brain enriched guanylate kinase associated INVOLVED IN evoked excitatory postsynaptic potential (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); papillary thyroid carcinoma (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955438 21572080 21580311 - 102018650 AGCD01035547;GBDF01209194;XM_013517281 XP_013372735 MODEL 8939296 protein-coding Actn1 actinin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal regulatory protein binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); actin filament organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); brush border (ortholog); cell junction (ortholog) NW_004955466 1388507 1480990 + 102003424 AGCD01050705;AGCD01050706;AGCD01050707;AGCD01050708;GBDJ01024886;XM_005399045;XM_005399046;XM_005399047;XM_005399048 XP_005399102;XP_005399103;XP_005399104;XP_005399105 MODEL 8740038 protein-coding Wac WW domain containing adaptor with coiled-coil ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH DeSanto-Shinawi syndrome (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955462 2358842 2435644 + 102015612 AGCD01049165;AGCD01049166;GBBH01064776;XM_005398110;XM_013521376;XM_013521377;XM_013521378;XM_013521379;XM_013521380 XP_005398167;XP_013376830;XP_013376831;XP_013376832;XP_013376833;XP_013376834 MODEL 8791802 ncrna LOC102009902 uncharacterized LOC102009902 NW_004956152 10489 11424 - 102009902 AGCD01079147;GBBH01228485;XR_265206 MODEL 39132613 rrna 5S_rRNA 5S ribosomal RNA 8863448 protein-coding Serpina12 serpin family A member 12 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); negative regulation of gluconeogenesis (ortholog); negative regulation of lipid biosynthetic process (ortholog); ASSOCIATED WITH mal de Meleda (ortholog); Metabolic Syndrome (ortholog); obesity (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) NW_004955438 17826596 17849341 + 102020610 AGCD01035454;AGCD01035455;GBDF01057280;XM_005390390;XM_013517145 XP_005390447;XP_013372599 MODEL 8788107 ncrna LOC102024038 uncharacterized LOC102024038 NW_004955429 22472048 22477861 - 102024038 AGCD01029028;GBCB01002019;XR_001234460;XR_261388 MODEL 39132472 snrna U6 U6 spliceosomal RNA 8748278 ncrna LOC102014920 uncharacterized LOC102014920 NW_004955497 2184151 2198275 - 102014920 AGCD01062497;GBCQ01002629;XR_001231440 MODEL 8905570 protein-coding Top1 DNA topoisomerase I ENCODES a protein that exhibits ATP binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to luteinizing hormone stimulus (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN irinotecan pharmacodynamics pathway; irinotecan pharmacokinetics pathway; ASSOCIATED WITH disease of cellular proliferation (ortholog); Disease Progression (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN cytoplasm (ortholog); dense fibrillar component (ortholog); fibrillar center (ortholog) NW_004955445 15834017 15922785 - 102005524 AGCD01039857;AGCD01039858;AGCD01039859;AGCD01039860;GBDJ01176800;XM_005392521 XP_005392578 MODEL 8801000 protein-coding Gbx1 gastrulation brain homeobox 1 INVOLVED IN adult walking behavior (ortholog); neuron fate commitment (ortholog); proprioception (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN nucleus (ortholog) NW_004955491 5575836 5592804 - 102030540 AGCD01060490;AGCD01060491;GBDF01020669;GBDF01039541;XM_013504621 XP_013360075 MODEL 8723078 protein-coding Tyw3 tRNA-yW synthesizing protein 3 homolog NW_004955423 17932008 17952681 - 102027656 AGCD01023865;AGCD01023866;GBCQ01176880;XM_005385234;XM_005385235;XM_013514508 XP_005385291;XP_005385292;XP_013369962 MODEL 8921014 protein-coding Golga1 golgin A1 ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN transepithelial transport (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) NW_004955419 3300351 3360495 + 102018188 AGCD01019717;AGCD01019718;AGCD01019719;GBCQ01030895;XM_005382475;XM_005382476;XM_013513149;XM_013513150;XM_013513151;XR_001233577;XR_260603 XP_005382532;XP_005382533;XP_013368603;XP_013368604;XP_013368605 MODEL 8794119 protein-coding Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amygdala development (ortholog); ATP metabolic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH alternating hemiplegia of childhood (ortholog); Alternating Hemiplegia of Childhood 1 (ortholog); benign familial infantile seizures 3 (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955468 11898786 11924341 + 102014344 AGCD01052139;GBDF01156916;XM_005400194 XP_005400251 MODEL 9046428 protein-coding Trim28 tripartite motif containing 28 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); chromo shadow domain binding (ortholog); INVOLVED IN convergent extension involved in axis elongation (ortholog); DNA damage response (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Colorectal Neoplasms (ortholog); nephroblastoma (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); heterochromatin (ortholog) NW_004955584 1148903 1156001 + 102030140 AGCD01075981;AGCD01075982;GBBH01031424;GBCB01020438;XM_013509851 XP_013365305 MODEL 8855936 pseudo LOC102005881 solute carrier family 35 member E3-like NW_004955451 2883147 2889213 - 102005881 AGCD01043026 MODEL 9028290 protein-coding Fam185a family with sequence similarity 185 member A FOUND IN mitochondrion (ortholog) NW_004955410 7960731 8011540 + 102015817 AGCD01010729;AGCD01010730;AGCD01010731;GBBH01057674;GBDF01250574;XM_013510521 XP_013365975 MODEL 8804822 protein-coding U2af1 U2 small nuclear RNA auxiliary factor 1 ENCODES a protein that exhibits RS domain binding (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); myelodysplastic syndrome (ortholog); osteoporosis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955407 38895741 38909820 + 102005108 AGCD01007813;AGCD01007814;GBBH01031743;XM_005375793;XM_005375794;XM_013505025 XP_005375850;XP_005375851;XP_013360479 MODEL 8904118 pseudo LOC102017915 60S ribosomal protein L22-like NW_004955439 5269080 5272255 + 102017915 AGCD01035727 MODEL 8748237 protein-coding Hlcs holocarboxylase synthetase ENCODES a protein that exhibits biotin binding (ortholog); biotin--[biotin carboxyl-carrier protein] ligase activity (ortholog); enzyme binding (ortholog); INVOLVED IN biotin metabolic process (ortholog); post-translational protein modification (ortholog); response to biotin (ortholog); PARTICIPATES IN biotin metabolic pathway; biotinidase deficiency pathway; holocarboxylase synthetase deficiency pathway; ASSOCIATED WITH genetic disease (ortholog); holocarboxylase synthetase deficiency (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nuclear lamina (ortholog) NW_004955407 35870820 36062066 - 102012061 AGCD01007753;AGCD01007754;AGCD01007755;GBBH01036963;GBDJ01016634;XM_013504641 XP_013360095 MODEL 8789423 ncrna LOC102019531 uncharacterized LOC102019531 NW_004955437 13535860 13540498 + 102019531 AGCD01034661;GBCE01038393;XR_001235077 MODEL 8894040 protein-coding Thap7 THAP domain containing 7 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); general transcription initiation factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955442 19311307 19313779 + 102022025 AGCD01038052;GBDF01090370;XM_005391822 XP_005391879 MODEL 8913123 protein-coding Plaat5 phospholipase A and acyltransferase 5 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); N-acyltransferase activity (ortholog); INVOLVED IN N-acylphosphatidylethanolamine metabolic process (ortholog) NW_004955599 217365 247914 - 102029811 AGCD01076631;AGCD01076632;AGCD01076633;AGCD01076634;AGCD01076635;AGCD01076636;GBDF01006273;XM_005414748;XM_005414749 XP_005414805;XP_005414806 MODEL 8782723 ncrna LOC102006893 uncharacterized LOC102006893 NW_004955468 7026096 7045290 - 102006893 AGCD01051993;AGCD01051994;GBCE01020831;XR_001236952;XR_263395 MODEL 9065147 protein-coding Tssk6 testis specific serine kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); peptidyl-serine phosphorylation (ortholog); protein phosphorylation (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); sperm flagellum (ortholog) NW_004955524 2433855 2434864 + 102014164 AGCD01068818;GBDF01008291;XM_005409638 XP_005409695 MODEL 8989629 protein-coding Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 INVOLVED IN regulation of AMPA receptor activity (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955420 23184914 23194809 - 102023604 AGCD01021233;GBDK01003599;XM_005383335 XP_005383392 MODEL 8898464 ncrna LOC102021318 uncharacterized LOC102021318 NW_004955410 18989630 19019952 + 102021318 AGCD01011016;GBCB01067072;XR_259849 MODEL 8997987 ncrna LOC102010678 uncharacterized LOC102010678 NW_004955410 29688647 29706211 + 102010678 AGCD01011293;GBDF01277999;XR_259884 MODEL 8944491 ncrna LOC102005111 uncharacterized LOC102005111 NW_004955456 1951198 1954207 + 102005111 AGCD01046243;GBDF01252185;XR_001236331;XR_001236332 MODEL 8734140 protein-coding Cfap52 cilia and flagella associated protein 52 INVOLVED IN establishment of left/right asymmetry (ortholog); flagellated sperm motility (ortholog); gene expression (ortholog); ASSOCIATED WITH visceral heterotaxy 10 (ortholog); visceral heterotaxy 5 (ortholog); FOUND IN 9+2 motile cilium (ortholog); axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog) NW_004955467 7461258 7524178 - 102009485 AGCD01051436;AGCD01051437;GBDI01009801;XM_005399379;XM_005399380;XM_005399382 XP_005399436;XP_005399437;XP_005399439 MODEL 8876781 protein-coding Insyn1 inhibitory synaptic factor 1 INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); inhibitory postsynaptic potential (ortholog); postsynaptic specialization organization (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic specialization (ortholog) NW_004955450 3857563 3867905 + 102023094 AGCD01042446;GBDJ01311313;XM_005393590 XP_005393647 MODEL 9002121 trna Trnat-ugu transfer RNA threonine (anticodon UGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955530;NW_004955550;NW_004955431;NW_004955550;NW_004955550 130485;1411138;19443004;1499781;1425424 130557;1411210;19443075;1499853;1425496 +;-;+;+;- 101978812 AGCD01030449;AGCD01069830;AGCD01072566;AGCD01072577 MODEL 8906889 protein-coding Khsrp KH-type splicing regulatory protein ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to cytokine stimulus (ortholog); miRNA metabolic process (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN cytoplasmic stress granule (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955495 3183083 3194356 + 102005058 AGCD01061833;AGCD01061834;AGCD01061835;GBBH01090066;GBCE01075167;XM_013505308 XP_013360762 MODEL 8729739 protein-coding Reep1 receptor accessory protein 1 ENCODES a protein that exhibits microtubule binding (ortholog); olfactory receptor binding (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); protein insertion into membrane (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant distal hereditary motor neuronopathy 12 (ortholog); autosomal dominant distal hereditary motor neuronopathy 5 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 1369490 1425611 + 102018107 AGCD01024237;GBCE01013291;XM_013514719 XP_013370173 MODEL 10078125 ncrna LOC106147064 uncharacterized LOC106147064 NW_004955514 5615595 5618348 + 106147064 AGCD01067157;GBCQ01120175;XR_001231776;XR_001231777;XR_001231778 MODEL 10228599 protein-coding Pdcd7 programmed cell death 7 INVOLVED IN positive regulation of apoptotic signaling pathway (ortholog); positive regulation of T cell apoptotic process (ortholog); response to glucocorticoid (ortholog); FOUND IN spliceosomal complex (ortholog); U12-type spliceosomal complex (ortholog); U2AF complex (ortholog) NW_004955450 10294184 10307234 + 106146308 AGCD01042609;AGCD01042610;GBCE01152997;GBDF01253203;XM_013518970 XP_013374424 MODEL 39134447 misc_rna 7SK 7SK RNA 10073919 protein-coding LOC106150043 uncharacterized LOC106150043 NW_004955462 7356342 7442399 + 106150043 AGCD01049302;AGCD01049303;AGCD01049304;AGCD01049305;GBDF01308303;XM_013521415;XM_013521416;XM_013521417;XM_013521418;XR_001236598;XR_001236599;XR_001236600;XR_001236601 XP_013376869;XP_013376870;XP_013376871;XP_013376872 MODEL 8820794 protein-coding Top1mt DNA topoisomerase I mitochondrial ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955454 2020884 2045939 - 102027810 AGCD01045000;AGCD01045001;AGCD01045002;GBDJ01349204;XM_005395761;XM_013520028;XM_013520029;XM_013520030;XM_013520032;XR_001236215 XP_005395818;XP_013375482;XP_013375483;XP_013375484;XP_013375486 MODEL 8762574 protein-coding Dmxl1 Dmx like 1 ASSOCIATED WITH high grade glioma (ortholog) NW_004955408 38705489 38850770 + 102030283 AGCD01009052;AGCD01009053;GBCE01171850;XM_005376544;XM_013506996;XM_013507007 XP_005376601;XP_013362450;XP_013362461 MODEL 8790286 protein-coding Art4 ADP-ribosyltransferase 4 (inactive) (Dombrock blood group) NW_004955413 11569779 11586548 - 102030619 AGCD01013964;AGCD01013965;GBDI01055135;XM_005379011 XP_005379068 MODEL 39134137 misc_rna 7SK 7SK RNA 8868196 pseudo LOC102022321 heterogeneous nuclear ribonucleoprotein C pseudogene NW_004955521 3730039 3730772 - 102022321 AGCD01068241 MODEL 9034969 protein-coding Hcfc1 host cell factor C1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autistic disorder (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955580 616477 636849 - 102024399 AGCD01075615;AGCD01075616;GBDJ01092545;XM_005414175 XP_005414232 MODEL 39131802 rrna 5S_rRNA 5S ribosomal RNA 39132620 rrna 5S_rRNA 5S ribosomal RNA 8838343 pseudo LOC102017165 small ubiquitin-related modifier 2-like NW_004955547 2270428 2274639 - 102017165 AGCD01072266 MODEL 8751102 pseudo LOC102014923 ferritin light chain pseudogene NW_004955502 6704822 6705352 + 102014923 AGCD01064414 MODEL 8972251 protein-coding Akap6 A-kinase anchoring protein 6 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN action potential (ortholog); cAMP/PKA signal transduction (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH anorexia nervosa (ortholog); atrial fibrillation (ortholog); congestive heart failure (ortholog); FOUND IN calcium channel complex (ortholog); caveola (ortholog); cytoplasm (ortholog) NW_004955409 28067814 28516881 - 102008602 AGCD01010226;AGCD01010227;AGCD01010228;AGCD01010229;AGCD01010230;AGCD01010231;AGCD01010232;AGCD01010233;AGCD01010234;AGCD01010235;AGCD01010236;GBCB01023293;XM_005376946;XM_013510378 XP_005377003;XP_013365832 MODEL 8914806 protein-coding Capn9 calpain 9 ASSOCIATED WITH hypertension (ortholog); stomach cancer (ortholog) NW_004955492 7809188 7845090 - 102011876 AGCD01060804;GBBH01138772;XM_005404988 XP_005405045 MODEL 8987813 pseudo LOC102021323 BTB/POZ domain-containing protein KCTD2-like NW_004955464 12405610 12412983 - 102021323 AGCD01050195;AGCD01050196 MODEL 9057145 protein-coding B3glct beta 3-glucosyltransferase ENCODES a protein that exhibits glycosyltransferase activity (ortholog); O-fucosylpeptide 3-beta-glucosyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); Peters plus syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955431 14507184 14621376 - 102016185 AGCD01030330;AGCD01030331;AGCD01030332;AGCD01030333;GBDK01188717;XM_013515733 XP_013371187 MODEL 8729776 pseudo LOC102019852 RAC-beta serine/threonine-protein kinase pseudogene NW_004955545 971815 973032 - 102019852 AGCD01071829;XM_005411742 MODEL 39133874 misc_rna 7SK 7SK RNA 8774829 protein-coding Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); behavioral response to ethanol (ortholog); ethanol catabolic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Binge Drinking (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955496 8136279 8149496 + 102026021 AGCD01062390;GBCQ01011154;XM_005406277 XP_005406334 MODEL 8964548 pseudo LOC102003378 S-phase kinase-associated protein 1 pseudogene NW_004955537 3218460 3219427 - 102003378 AGCD01070953 MODEL 8796332 protein-coding Trnau1ap tRNA selenocysteine 1 associated protein 1 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 7645715 7663165 + 102017838 AGCD01044179;AGCD01044180;GBDF01189732;XM_005394958 XP_005395015 MODEL 8941527 ncrna LOC102005882 uncharacterized LOC102005882 NW_004955452 2251854 2256006 - 102005882 AGCD01043886;XR_262636 MODEL 8720387 protein-coding Fgf7 fibroblast growth factor 7 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); branching involved in salivary gland morphogenesis (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH cervical squamous cell carcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); GABA-ergic synapse (ortholog) NW_004955409 4633542 4686768 - 102007739 AGCD01009294;AGCD01009295;GBDI01327012;XM_005376685;XM_005376686;XM_013510298 XP_005376742;XP_005376743;XP_013365752 MODEL 8939665 protein-coding LOC102017919 olfactory receptor 11G2-like NW_004955550 885332 886303 - 102017919 AGCD01072528;XM_005412039 XP_005412096 MODEL 8858498 protein-coding Art5 ADP-ribosyltransferase 5 ENCODES a protein that exhibits NAD+ nucleosidase activity (ortholog); NAD+-protein-arginine ADP-ribosyltransferase activity (ortholog); FOUND IN membrane (ortholog) NW_004955414 19460652 19464771 - 102007218 AGCD01081640;GBDJ01335349;XM_005380023 XP_005380080 MODEL 39132473 snrna U6 U6 spliceosomal RNA 8700760 pseudo LOC102024039 RNA exonuclease 1 homolog pseudogene NW_004955431 8914638 8931636 - 102024039 AGCD01030148;AGCD01030149;XM_005387663 MODEL 9057163 protein-coding Actn2 actinin alpha 2 ENCODES a protein that exhibits actin filament binding (ortholog); channel activator activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament uncapping (ortholog); cardiac muscle cell development (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); cardiomyopathy (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); filopodium (ortholog); focal adhesion (ortholog) NW_004955492 3483704 3554831 - 102016925 AGCD01060698;GBDI01007507;XM_005404929 XP_005404986 MODEL 8856910 protein-coding LOC102012271 HAUS augmin-like complex subunit 8 NW_004956214 17 6395 + 102012271 AGCD01079252;GBDI01323698;GBDK01356093;XM_005415178;XM_005415179;XM_005415180;XM_005415181 XP_005415235;XP_005415236;XP_005415237;XP_005415238 MODEL 8739352 protein-coding Wapl WAPL cohesin release factor ENCODES a protein that exhibits ATP-dependent protein-DNA unloader activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromatin looping (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH clubfoot (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955510 5596622 5674221 - 102007681 AGCD01066283;AGCD01066284;AGCD01066285;GBDI01171890;XM_005407895;XM_013506324 XP_005407952;XP_013361778 MODEL 9008967 protein-coding Serpina3 serpin family A member 3 ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Arterial Occlusive Diseases (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN extracellular space (ortholog) NW_004955438 17758763 17766113 - 102020287 AGCD01035451;GBCE01004471;XM_005390389 XP_005390446 MODEL 8922769 protein-coding Psmd3 proteasome 26S subunit, non-ATPase 3 INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) NW_004955451 14666882 14685573 + 102007615 AGCD01043565;AGCD01043566;GBBH01033601;GBDF01005924;XM_005394339 XP_005394396 MODEL 8949287 pseudo LOC102005113 basigin pseudogene NW_004955408 34149587 34150365 + 102005113 AGCD01008895;XM_005376594 MODEL 8712765 protein-coding Cfap53 cilia and flagella associated protein 53 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH dextrocardia (ortholog); genetic disease (ortholog); hypoplastic left heart syndrome (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal A tubule inner sheath (ortholog) NW_004955402 35295007 35318800 - 102015679 AGCD01000878;GBDJ01272671;XM_005372915;XM_013510706 XP_005372972;XP_013366160 MODEL 8861449 protein-coding Tyw5 tRNA-yW synthesizing protein 5 ENCODES a protein that exhibits iron ion binding (ortholog); protein homodimerization activity (ortholog); tRNA binding (ortholog); INVOLVED IN wybutosine biosynthetic process (ortholog) NW_004955403 1326027 1351039 + 102008280 AGCD01001717;GBDF01248752;XM_005373255;XM_013511941 XP_005373312;XP_013367395 MODEL 8798355 protein-coding Trim29 tripartite motif containing 29 ENCODES a protein that exhibits identical protein binding (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of protein localization to nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955412 21134076 21158982 - 102010139 AGCD01013018;GBCE01037365;XM_005378344;XM_013511251 XP_005378401;XP_013366705 MODEL 8901313 protein-coding Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); D1 dopamine receptor binding (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); blood circulation (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH alternating hemiplegia of childhood (ortholog); Alternating Hemiplegia of Childhood 2 (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); calyx of Held (ortholog); cell surface (ortholog) NW_004955555 869508 892510 + 102005309 AGCD01073051;GBBH01169114;XM_005412401 XP_005412458 MODEL 8774510 pseudo LOC102009903 probable U3 small nucleolar RNA-associated protein 11 pseudogene NW_004957626 626 1246 + 102009903 AGCD01081022 MODEL 9014055 protein-coding LOC102019532 melanoma-associated antigen 10-like NW_004955539 704919 709030 - 102019532 AGCD01071189;GBDF01042091;XM_005410902 XP_005410959 MODEL 8798737 protein-coding Fam186a family with sequence similarity 186 member A NW_004955547 870511 930908 - 102015895 AGCD01072188;AGCD01072189;AGCD01072190;AGCD01072191;AGCD01072192;AGCD01072193;AGCD01072194;AGCD01072195;AGCD01072196;AGCD01072197;GBDF01046817;XM_005411959 XP_005412016 MODEL 9015108 protein-coding LOC102006896 apolipoprotein L2-like NW_004955413 22677705 22696823 + 102006896 AGCD01014312;AGCD01014313;GBBH01039748;XM_013511299 XP_013366753 MODEL 8900195 protein-coding Ap4b1 adaptor related protein complex 4 subunit beta 1 INVOLVED IN protein localization to somatodendritic compartment (ortholog); protein targeting (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 47 (ortholog); FOUND IN AP-4 adaptor complex (ortholog); cytoplasmic side of trans-Golgi network transport vesicle membrane (ortholog); cytosol (ortholog) NW_004955435 17163099 17173427 - 102015562 AGCD01033347;GBCB01025564;XM_005388988;XM_005388989;XM_005388990;XM_005388991;XM_013516537 XP_005389045;XP_005389046;XP_005389047;XP_005389048;XP_013371991 MODEL 8888147 protein-coding U2af2 U2 small nuclear RNA auxiliary factor 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); enzyme binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); negative regulation of protein ubiquitination (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH developmental delay, dysmorphic facies, and brain anomalies (ortholog); genetic disease (ortholog); leukodystrophy (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955567 683472 699105 - 102013226 AGCD01074424;AGCD01074425;GBDJ01002993;XM_005413290;XM_005413291 XP_005413347;XP_005413348 MODEL 8931125 protein-coding Thap8 THAP domain containing 8 FOUND IN nucleoplasm (ortholog) NW_004955468 2545327 2559106 + 102010888 AGCD01051825;AGCD01051826;AGCD01051827;GBDK01230411;XM_005399924 XP_005399981 MODEL 8769994 protein-coding Plac1 placenta enriched 1 INVOLVED IN placenta development (ortholog); spongiotrophoblast layer developmental growth (ortholog) NW_004955473 264265 415616 + 102023583 AGCD01053834;AGCD01053835;AGCD01053836;GBDF01249559;XM_005401198;XM_013523053 XP_005401255;XP_013378507 MODEL 8754672 trna Trnav-aac transfer RNA valine (anticodon AAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978798 AGCD01020530;AGCD01050590;AGCD01050597;AGCD01050600;AGCD01057602;AGCD01069830;AGCD01071614 MODEL 9004013 protein-coding Fgf8 fibroblast growth factor 8 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); breast cancer (ortholog); Cardiovascular Abnormalities (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955485 8517412 8521732 + 102017343 AGCD01058719;GBDF01030332;XM_005403931 XP_005403988 MODEL 8888458 protein-coding Tst thiosulfate sulfurtransferase ENCODES a protein that exhibits 5S rRNA binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); rRNA import into mitochondrion (ortholog); rRNA transport (ortholog); ASSOCIATED WITH colitis (ortholog); hepatocellular carcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 23528468 23534890 - 102025559 AGCD01014332;GBCB01007472;XM_005379180 XP_005379237 MODEL 8886432 pseudo LOC102010681 WD repeat domain phosphoinositide-interacting protein 2-like NW_004955411 4563483 4584420 + 102010681 AGCD01011581 MODEL 8765495 protein-coding Hcfc1r1 host cell factor C1 regulator 1 NW_004955442 14318071 14319549 + 102006717 AGCD01037810;GBBH01207291;XM_005391374 XP_005391431 MODEL 8823308 protein-coding Insyn2a inhibitory synaptic factor 2A INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); inhibitory postsynaptic potential (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic specialization (ortholog) NW_004955477 4945431 5003381 - 102012425 AGCD01055589;GBDF01261199;XM_005402006;XM_005402007;XM_005402008 XP_005402063;XP_005402064;XP_005402065 MODEL 10086815 protein-coding Kiaa0040 KIAA0040 ortholog NW_004955406 14960837 14961459 - 106149968 AGCD01005975;GBDF01021546;XM_013520951 XP_013376405 MODEL 9012848 protein-coding Golga2 golgin A2 ENCODES a protein that exhibits identical protein binding (ortholog); importin-alpha family protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN asymmetric cell division (ortholog); centrosome cycle (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Developmental Delay with Hypotonia, Myopathy, and Brain Abnormalities (ortholog); neuromuscular disease (ortholog); FOUND IN cis-Golgi network (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955570 782218 799044 - 102023086 AGCD01074765;AGCD01074766;GBDK01012403;XM_005413532;XM_013509386;XM_013509387;XM_013509388;XM_013509389 XP_005413589;XP_013364840;XP_013364841;XP_013364842;XP_013364843 MODEL 10176935 ncrna LOC106150044 uncharacterized LOC106150044 NW_004955406 21066788 21090380 - 106150044 AGCD01006116;AGCD01006117;GBDI01283220;XR_001236604;XR_001236605;XR_001236606 MODEL 8857313 protein-coding Bend2 BEN domain containing 2 INVOLVED IN chromatin organization (ortholog); double-strand break repair (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955519 104726 155418 + 102029432 AGCD01067855;GBDF01303209;XM_013506980;XM_013506981 XP_013362434;XP_013362435 MODEL 8784604 pseudo LOC102021324 60S ribosomal protein L23a pseudogene NW_004955411 28661333 28675617 + 102021324 AGCD01012223;AGCD01012224;AGCD01012225 MODEL 9047238 protein-coding Pdcl phosducin like ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN heterotrimeric G-protein complex assembly (ortholog); negative regulation of protein refolding (ortholog); positive regulation of smoothened signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) NW_004955419 5123490 5132092 + 102004281 AGCD01019783;GBDF01280771;XM_013513301 XP_013368755 MODEL 8834743 protein-coding Hlf HLF transcription factor, PAR bZIP family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); prostate cancer (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 7309895 7364166 - 102017291 AGCD01043233;GBCQ01009191;XM_005394081;XM_005394082 XP_005394138;XP_005394139 MODEL 9047769 protein-coding Dmxl2 Dmx like 2 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN brain development (ortholog); chemical synaptic transmission (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); autism spectrum disorder (ortholog); autosomal dominant nonsyndromic deafness 71 (ortholog); FOUND IN neuronal dense core vesicle (ortholog); synaptic vesicle (ortholog) NW_004955409 2934755 3089572 + 102022570 AGCD01009230;AGCD01009231;AGCD01009232;AGCD01009233;AGCD01009234;GBBH01193605;GBDF01085229;XM_005376642 XP_005376699 MODEL 39131930 snrna U1 U1 spliceosomal RNA 8769906 ncrna LOC102022325 uncharacterized LOC102022325 NW_004955534 3881965 3883137 - 102022325 AGCD01070605;GBDI01106511;XR_264762 MODEL 9040604 protein-coding Trim3 tripartite motif containing 3 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of toll-like receptor 3 signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955414 22181999 22207244 - 102021962 AGCD01015448;GBCE01154433;XM_005380144;XM_005380145;XM_005380146 XP_005380201;XP_005380202;XP_005380203 MODEL 8997832 protein-coding Dvl3 dishevelled segment polarity protein 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); frizzled binding (ortholog); protease binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); autosomal dominant Robinow syndrome 3 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 23291650 23301695 - 102030085 AGCD01021240;AGCD01021241;GBDI01077356;GBDK01277196;XM_013513361 XP_013368815 MODEL 39131803 rrna 5S_rRNA 5S ribosomal RNA 8773265 pseudo LOC102017166 microtubule-associated protein RP/EB family member 1 pseudogene NW_004955442 13267206 13268206 + 102017166 AGCD01037766;XM_005391316 MODEL 10356932 pseudo LOC106147065 calcium-binding mitochondrial carrier protein Aralar1 pseudogene NW_004955408 32718391 32718634 - 106147065 AGCD01008852 MODEL 8846540 pseudo LOC102014924 zinc finger SWIM domain-containing protein 7 pseudogene NW_004955503 7550773 7554568 - 102014924 AGCD01064795 MODEL 8843723 protein-coding Artn artemin ENCODES a protein that exhibits growth factor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); induction of positive chemotaxis (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); Animal Disease Models (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular space (ortholog) NW_004955537 3460176 3464335 + 102007592 AGCD01070959;GBCE01108535;XM_005410688;XM_013507753;XM_013507754;XM_013507755;XM_013507756 XP_005410745;XP_013363207;XP_013363208;XP_013363209;XP_013363210 MODEL 8945436 protein-coding Reep2 receptor accessory protein 2 ENCODES a protein that exhibits taste receptor binding (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); protein transport into membrane raft (ortholog); sensory perception of bitter taste (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 5A (ortholog); hereditary spastic paraplegia 72A (ortholog); FOUND IN cytoplasmic microtubule (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955418 2018891 2024545 - 102026866 AGCD01018739;GBCE01152326;XM_005382101;XM_005382102;XM_005382103 XP_005382158;XP_005382159;XP_005382160 MODEL 8890366 protein-coding Actn3 actinin alpha 3 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); focal adhesion assembly (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); FOUND IN brush border (ortholog); focal adhesion (ortholog); sarcomere (ortholog) NW_004955422 18799372 18812458 - 102007909 AGCD01022961;GBCB01004475;XM_005384391 XP_005384448 MODEL 8775268 protein-coding Fgf9 fibroblast growth factor 9 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell signaling (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN basement membrane (ortholog); extracellular space (ortholog) NW_004955497 2199424 2232088 + 102015123 AGCD01062498;AGCD01062499;GBCQ01178042;XM_005406315 XP_005406372 MODEL 8994935 protein-coding Capns1 calpain small subunit 1 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); primary pulmonary hypertension 6 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955468 2446631 2454369 - 102009268 AGCD01051817;AGCD01051818;GBCB01005315;XM_013522335 XP_013377789 MODEL 8832531 protein-coding Top2a DNA topoisomerase II alpha ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); chromatin binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); cerebellar granule cell differentiation (ortholog); cerebellar Purkinje cell differentiation (ortholog); PARTICIPATES IN doxorubicin pharmacodynamics pathway; etoposide pharmacodynamics pathway; etoposide pharmacokinetics pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); adenoid cystic carcinoma (ortholog); adrenocortical carcinoma (ortholog); FOUND IN centriole (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) NW_004955451 14928273 14964855 - 102021727 AGCD01043584;AGCD01043585;AGCD01043586;AGCD01043587;AGCD01043588;AGCD01043589;GBBH01012210;GBDI01224195;XM_013519327 XP_013374781 MODEL 39134138 misc_rna 7SK 7SK RNA 8929660 ncrna LOC102019853 uncharacterized LOC102019853 NW_004955441 8638196 8639968 + 102019853 AGCD01036989;GBDF01046408;XR_262060 MODEL 8782666 ncrna LOC102005885 uncharacterized LOC102005885 NW_004955405 12185694 12195667 + 102005885 AGCD01004849;GBDF01147002;XR_259373 MODEL 9055972 protein-coding Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) NW_004955588 607763 618040 + 102028482 AGCD01076117;GBDF01043329;XM_005414507;XM_005414508 XP_005414564;XP_005414565 MODEL 8860411 protein-coding Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); aldehyde oxidase activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN ethanol catabolic process (ortholog); ethanol metabolic process (ortholog); fatty acid omega-oxidation (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); Laryngeal Neoplasms (ortholog); Mouth Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955496 8065943 8100878 + 102025025 AGCD01062388;GBBH01150230;XM_005406273;XM_005406274;XM_013505402;XM_013505404;XM_013505405 XP_005406330;XP_005406331;XP_013360856;XP_013360858;XP_013360859 MODEL 8987850 ncrna LOC102024042 uncharacterized LOC102024042 NW_004955522 936102 943819 - 102024042 AGCD01068353;AGCD01068354;GBDF01208604;XR_001231896 MODEL 8922735 protein-coding Gbx2 gastrulation brain homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); axon guidance (ortholog); branching involved in blood vessel morphogenesis (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN nucleus (ortholog) NW_004955453 538066 541415 + 102029586 AGCD01044594;AGCD01044595;XM_013519759 XP_013375213 MODEL 8883171 protein-coding Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); cardiac muscle contraction (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Developmental Disabilities (ortholog); essential hypertension (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955462 8072519 8095311 - 102016245 AGCD01049314;AGCD01049315;GBBH01031781;GBDI01007069;XM_005398203 XP_005398260 MODEL 39132474 snrna U6 U6 spliceosomal RNA 8770222 protein-coding Fam186b family with sequence similarity 186 member B ASSOCIATED WITH nephronophthisis (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955547 198336 232031 - 102004522 AGCD01072137;AGCD01072138;AGCD01072139;AGCD01072140;GBDF01008362;XM_005411837;XM_005411840;XM_013508463;XM_013508464;XM_013508465 XP_005411894;XP_005411897;XP_013363917;XP_013363918;XP_013363919 MODEL 8896208 trna Trnav-cac transfer RNA valine (anticodon CAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978801 AGCD01050589;AGCD01052199;AGCD01057606;AGCD01061910;AGCD01069830;AGCD01076044;AGCD01080385 MODEL 8804376 protein-coding Akap7 A-kinase anchoring protein 7 ENCODES a protein that exhibits AMP binding (ortholog); protein domain specific binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN action potential (ortholog); cAMP/PKA signal transduction (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955436 11883840 12002668 + 102017601 AGCD01033822;AGCD01033823;AGCD01033824;GBBH01106984;GBCE01089361;XM_013516678 XP_013372132 MODEL 8737485 protein-coding Wars1 tryptophanyl-tRNA synthetase 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); regulation of angiogenesis (ortholog); tryptophanyl-tRNA aminoacylation (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 9 (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955438 21414878 21445417 - 102006711 AGCD01035542;AGCD01035543;AGCD01035544;GBCE01053817;XM_005390433;XM_005390434;XM_005390436;XM_013517225 XP_005390490;XP_005390491;XP_005390493;XP_013372679 MODEL 8828118 protein-coding LOC102010684 C-type lectin domain family 2 member F-like NW_004955413 7860820 7873954 + 102010684 AGCD01013834;GBDF01050906;XM_005378944 XP_005379001 MODEL 8994483 protein-coding Tstd1 thiosulfate sulfurtransferase like domain containing 1 ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (ortholog) NW_004955468 12813116 12814651 - 102024208 AGCD01052189;GBDF01162197;XM_005400229;XM_013522524;XM_013522525 XP_005400286;XP_013377978;XP_013377979 MODEL 39131804 rrna 5S_rRNA 5S ribosomal RNA 9009582 protein-coding Cfap54 cilia and flagella associated protein 54 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); cilium movement involved in cell motility (ortholog); ASSOCIATED WITH Primary Ciliary Dyskinesia 54 (ortholog); Spermatogenic Failure 98 (ortholog) NW_004955405 32728455 33036612 + 102010664 AGCD01005342;AGCD01005343;AGCD01005344;AGCD01005345;AGCD01005346;AGCD01005347;AGCD01005348;AGCD01005349;AGCD01005350;GBDF01128253;XM_005374497;XM_013518536;XM_013518540;XM_013518543;XM_013518547 XP_005374554;XP_013373990;XP_013373994;XP_013373997;XP_013374001 MODEL 8896792 protein-coding Reep3 receptor accessory protein 3 INVOLVED IN mitotic nuclear membrane reassembly (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog) NW_004955425 16633900 16689549 + 102026234 AGCD01025615;AGCD01025616;AGCD01025617;GBDJ01126439;XM_013514852;XM_013514853;XM_013514854 XP_013370306;XP_013370307;XP_013370308 MODEL 9023936 ncrna LOC102003383 uncharacterized LOC102003383 NW_004955440 16475861 16478883 - 102003383 AGCD01036518;GBDF01286061;XR_262033 MODEL 8818740 protein-coding Insyn2b inhibitory synaptic factor family member 2B NW_004955408 22842645 22864156 - 102014421 AGCD01008581;GBDF01044092;XM_005376309;XR_001232379 XP_005376366 MODEL 8765103 protein-coding Golga3 golgin A3 FOUND IN cytosol (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955482 272430 313499 + 102017337 AGCD01057168;AGCD01057169;GBDJ01410803;XM_005402941;XM_005402942 XP_005402998;XP_005402999 MODEL 39131931 snrna U1 U1 spliceosomal RNA 8765696 pseudo LOC102009912 KATNB1-like protein 1 pseudogene NW_004955406 13799840 13800569 + 102009912 AGCD01005954 MODEL 39132621 rrna 5S_rRNA 5S ribosomal RNA 8867892 protein-coding Bend3 BEN domain containing 3 ENCODES a protein that exhibits rDNA binding (ortholog); INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of ATP metabolic process (ortholog); FOUND IN heterochromatin (ortholog); nucleolus (ortholog) NW_004955411 32346573 32384796 - 102008512 AGCD01012309;GBDF01161780;XM_005377836;XM_013510795;XM_013510796;XM_013510797 XP_005377893;XP_013366249;XP_013366250;XP_013366251 MODEL 8812727 protein-coding U2surp U2 snRNP associated SURP domain containing ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U2 snRNP (ortholog) NW_004955508 2880638 2931146 - 102011224 AGCD01065799;GBCE01118464;GBDF01047997;XM_005407733 XP_005407790 MODEL 8705388 ncrna LOC102022326 uncharacterized LOC102022326 NW_004955538 1051081 1056074 - 102022326 AGCD01071043;GBDF01261166;XR_264794 MODEL 39134448 misc_rna 7SK 7SK RNA 8834284 pseudo LOC102005116 solute carrier family 25 member 36 pseudogene NW_004955459 839058 893923 - 102005116 AGCD01047955;AGCD01047956;AGCD01047957 MODEL 9012750 protein-coding Serpina5 serpin family A member 5 ENCODES a protein that exhibits acrosin binding (ortholog); phosphatidylcholine binding (ortholog); protease binding (ortholog); INVOLVED IN negative regulation of proteolysis (ortholog); seminal clot liquefaction (ortholog); seminal vesicle development (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Arterial Occlusive Diseases (ortholog); cholestasis (ortholog); FOUND IN acrosomal membrane (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) NW_004955438 17787398 17796013 - 102019959 AGCD01035451;GBDF01001290;XM_005390388 XP_005390445 MODEL 8963609 protein-coding B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Graves' disease (ortholog); rheumatoid arthritis (ortholog) NW_004955424 21859901 21888722 - 102018944 AGCD01024912;AGCD01024913;GBCC01012841;XM_005385732 XP_005385789 MODEL 39133875 misc_rna 7SK 7SK RNA 15036841 trna Trnav-gac transfer RNA valine (anticodon GAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978799 10235809 ncrna LOC106147066 uncharacterized LOC106147066 NW_004955514 5324731 5327152 + 106147066 AGCD01067151;GBDF01056348;XR_001231779 MODEL 8982295 ncrna LOC102006897 uncharacterized LOC102006897 NW_004955469 7416386 7428166 + 102006897 AGCD01052415;GBDF01307558;XR_263435 MODEL 8728497 ncrna LOC102017922 uncharacterized LOC102017922 NW_004955557 454172 479709 - 102017922 AGCD01073244;GBDI01153372;XR_001232319;XR_264980 MODEL 8778277 protein-coding Actn4 actinin alpha 4 ENCODES a protein that exhibits actin filament binding (ortholog); chromatin DNA binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); bicellular tight junction assembly (ortholog); gene expression (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cortical actin cytoskeleton (ortholog) NW_004955468 770573 841859 - 102010788 AGCD01051739;AGCD01051740;GBCB01059599;XM_005399834;XM_005399835;XM_013522442 XP_005399891;XP_005399892;XP_013377896 MODEL 39131805 rrna 5S_rRNA 5S ribosomal RNA 8831740 protein-coding Ap4e1 adaptor related protein complex 4 subunit epsilon 1 ASSOCIATED WITH congenital disorder of glycosylation Ig (ortholog); Developmental Disease (ortholog); Familial Persistent Stuttering 1 (ortholog); FOUND IN AP-4 adaptor complex (ortholog) NW_004955409 3476527 3532683 - 102026401 AGCD01009242;AGCD01009243;AGCD01009244;AGCD01009245;GBBH01198101;GBDJ01422441;XM_013510289 XP_013365743 MODEL 8887962 protein-coding Dna2 DNA replication helicase/nuclease 2 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-flap endonuclease activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA double-strand break processing (ortholog); DNA replication (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 6 (ortholog); congenital myopathy (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955425 20664412 20705070 - 102009079 AGCD01025752;AGCD01025753;GBDF01307460;XM_013514832;XM_013514833;XM_013514834 XP_013370286;XP_013370287;XP_013370288 MODEL 8896877 protein-coding Plac8 placenta associated 8 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); defense response to bacterium (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Chlamydiaceae Infections (ortholog); Escherichia Coli Infections (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955474 6518459 6533251 + 102030066 AGCD01054481;GBBH01004306;XM_005401386 XP_005401443 MODEL 8723429 protein-coding Hltf helicase like transcription factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); ATP-dependent chromatin remodeler activity (ortholog); DNA translocase activity (ortholog); INVOLVED IN chromosomal DNA methylation maintenance following DNA replication (ortholog); DNA damage response (ortholog); mRNA transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); FOUND IN chromatin (ortholog); nuclear replication fork (ortholog); nucleoplasm (ortholog) NW_004955474 8411912 8488938 + 102013600 AGCD01054553;AGCD01054554;GBDF01004721;XM_005401415;XM_005401416;XM_005401417;XM_005401420;XM_005401421;XM_013502747 XP_005401472;XP_005401473;XP_005401474;XP_005401477;XP_005401478;XP_013358201 MODEL 8985858 protein-coding Psmd5 proteasome 26S subunit, non-ATPase 5 INVOLVED IN proteasome regulatory particle assembly (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome regulatory particle, base subcomplex (ortholog) NW_004955419 7199549 7221431 + 102025008 AGCD01019875;GBBH01025438;XM_005382593 XP_005382650 MODEL 8857789 protein-coding Adhfe1 alcohol dehydrogenase iron containing 1 ENCODES a protein that exhibits hydroxyacid-oxoacid transhydrogenase activity (ortholog); INVOLVED IN ketone body catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955444 12706404 12745106 - 102017281 AGCD01039078;AGCD01039079;AGCD01039080;AGCD01039081;GBBH01059619;GBBH01208438;XM_005392153 XP_005392210 MODEL 39131932 snrna U1 U1 spliceosomal RNA 8943180 protein-coding Trim32 tripartite motif containing 32 ENCODES a protein that exhibits identical protein binding (ortholog); myosin binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin ubiquitination (ortholog); autophagosome assembly (ortholog); axon development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 11 (ortholog); FOUND IN autophagosome (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955419 11151751 11168046 - 102003875 AGCD01019953;GBDF01241008;XM_005382612;XM_005382613;XM_005382614;XM_005382615;XM_005382616;XM_013513264 XP_005382669;XP_005382670;XP_005382671;XP_005382672;XP_005382673;XP_013368718 MODEL 8734490 protein-coding Cfap57 cilia and flagella associated protein 57 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium organization (ortholog); single fertilization (ortholog); ASSOCIATED WITH male infertility (ortholog); primary ciliary dyskinesia (ortholog); spermatogenic failure 95 (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) NW_004955537 2799965 2861411 + 102021277 AGCD01070938;AGCD01070939;GBDF01117921;XM_005410633;XM_005410634;XM_005410635;XM_013507773 XP_005410690;XP_005410691;XP_005410692;XP_013363227 MODEL 39132475 snrna U6 U6 spliceosomal RNA 8714532 protein-coding Dxo decapping exoribonuclease ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); magnesium ion binding (ortholog); mRNA 5'-diphosphatase activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); NAD-cap decapping (ortholog); nuclear mRNA surveillance (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 482866 484989 - 102007366 AGCD01034137;GBBH01005656;XM_005389406 XP_005389463 MODEL 8703676 protein-coding Hcfc2 host cell factor C2 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); immune response involved in response to exogenous dsRNA (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955405 38729700 38758398 + 102009455 AGCD01005484;AGCD01005485;GBDF01082212;XM_005374584;XM_005374585;XM_005374586;XM_013518889 XP_005374641;XP_005374642;XP_005374643;XP_013374343 MODEL 8959293 protein-coding Arv1 ARV1 fatty acid homeostasis modulator ENCODES a protein that exhibits sterol transfer activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid metabolic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); ASSOCIATED WITH blindness (ortholog); developmental and epileptic encephalopathy 38 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955492 7669956 7683293 - 102011325 AGCD01060802;GBDK01360217;XM_005404986;XM_005404987 XP_005405043;XP_005405044 MODEL 8958593 protein-coding LOC102017168 mesothelin-like protein NW_004955442 16429918 16440136 + 102017168 AGCD01037900;GBBH01146203;XM_005391610 XP_005391667 MODEL 8741120 protein-coding Gc GC vitamin D binding protein ENCODES a protein that exhibits actin binding (ortholog); calcidiol binding (ortholog); vitamin D binding (ortholog); INVOLVED IN female pregnancy (ortholog); lactation (ortholog); response to estradiol (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); AIDS Dementia Complex (ortholog); FOUND IN axon (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955447 1361698 1400633 + 102020622 AGCD01040519;GBDI01295719;XM_005392770;XR_262404 XP_005392827 MODEL 8894794 protein-coding Kiaa0232 KIAA0232 ortholog NW_004955514 3581654 3630754 - 102018427 AGCD01067100;AGCD01067101;GBCQ01040836;GBCQ01040843;XM_013506822 XP_013362276 MODEL 8860643 protein-coding Capns2 calpain small subunit 2 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog) NW_004955433 13106820 13107865 + 102005625 AGCD01031676;GBDI01243871;XM_005388318 XP_005388375 MODEL 39134139 misc_rna 7SK 7SK RNA 8799950 protein-coding Fgfbp1 fibroblast growth factor binding protein 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955480 8088670 8091882 + 102015009 AGCD01056715;AY462142;GBBH01115136;XM_005402520 AAR26541;XP_005402577 MODEL 8714835 ncrna LOC102019856 uncharacterized LOC102019856 NW_004955442 15495092 15496400 + 102019856 AGCD01037875;GBBH01200853;XR_001235363 MODEL 9033826 protein-coding LOC102010688 olfactory receptor 52D1-like NW_004955414 21652761 21653761 + 102010688 AGCD01015425;XM_005380102 XP_005380159 MODEL 8847101 protein-coding Thap9 THAP domain containing 9 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); transposase activity (ortholog); INVOLVED IN DNA integration (ortholog); DNA recombination (ortholog); DNA transposition (ortholog) NW_004955433 6906034 6922832 + 102008139 AGCD01031555;AGCD01031556;AGCD01031557;GBBH01144757;GBDF01307948;XM_013516173 XP_013371627 MODEL 8717861 ncrna LOC102012280 uncharacterized LOC102012280 NW_004955455 541374 542760 - 102012280 AGCD01045560;GBDF01021764;XR_262806 MODEL 8824698 protein-coding Top2b DNA topoisomerase II beta ENCODES a protein that exhibits chromatin binding (ortholog); DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN axonogenesis (ortholog); B cell differentiation (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN doxorubicin pharmacodynamics pathway; doxorubicin response pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); B-Cell Immunodeficiency, Distal Limb Anomalies, and Urogenital Malformations (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); heterochromatin (ortholog); nucleolus (ortholog) NW_004955430 17457603 17523115 - 102012788 AGCD01029657;AGCD01029658;AGCD01029659;AGCD01029660;AGCD01029661;AGCD01029662;GBCE01117472;GBDI01076437;XM_005387486 XP_005387543 MODEL 8797004 protein-coding Ints1 integrator complex subunit 1 INVOLVED IN blastocyst growth (ortholog); embryo implantation (ortholog); inner cell mass cell proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with cataracts, poor growth, and dysmorphic facies (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nucleus (ortholog) NW_004955460 9116650 9149470 - 102020093 AGCD01048539;AGCD01048540;GBDI01084167;XM_013521197;XM_013521198;XM_013521199;XM_013521200;XM_013521201 XP_013376651;XP_013376652;XP_013376653;XP_013376654;XP_013376655 MODEL 8928631 protein-coding LOC102009913 keratin-associated protein 20-2-like NW_004955407 30225299 30225502 + 102009913 AGCD01007628;XM_005375649 XP_005375706 MODEL 9004461 protein-coding Atp1b2 ATPase Na+/K+ transporting subunit beta 2 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN cell-substrate adhesion (ortholog); intracellular potassium ion homeostasis (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cerebellar ataxia (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte end-foot (ortholog); astrocyte projection (ortholog) NW_004955467 9261775 9268743 - 102005129 AGCD01051486;GBDF01252804;XM_005399462 XP_005399519 MODEL 39134449 misc_rna 7SK 7SK RNA 8907454 protein-coding Actr10 actin related protein 10 INVOLVED IN microtubule-based movement (ortholog); microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN dynactin complex (ortholog) NW_004955466 11948711 11969981 + 102029949 AGCD01051106;GBBH01061775;XM_005399211 XP_005399268 MODEL 8948625 protein-coding Bend4 BEN domain containing 4 ASSOCIATED WITH ENCEPHALOPATHY, ACUTE, INFECTION-INDUCED, 3 (ortholog); lung non-small cell carcinoma (ortholog) NW_004955443 5593351 5613569 + 102009230 AGCD01038242;GBBH01170689;XM_005391922 XP_005391979 MODEL 8755395 protein-coding Pdcl2 phosducin like 2 INVOLVED IN acrosome assembly (ortholog); flagellated sperm motility (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955447 15364116 15386071 + 102004339 AGCD01041052;GBDF01008116;XM_005392883;XM_005392884;XM_005392885 XP_005392940;XP_005392941;XP_005392942 MODEL 9053487 protein-coding Wars2 tryptophanyl tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits tryptophan-tRNA ligase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); vasculogenesis (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); Mitochondrial Neurodevelopmental Disorder, with Abnormal Movements and Lactic Acidosis, with or without Seizures (ortholog); Parkinsonism-Dystonia, Childhood-Onset, 3 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955435 22032230 22115138 - 102014082 AGCD01033489;AGCD01033490;AGCD01033491;GBCB01110388;XM_005389073;XM_005389075 XP_005389130;XP_005389132 MODEL 8901899 protein-coding Serpina6 serpin family A member 6 ENCODES a protein that exhibits molecular carrier activity (ortholog); steroid binding (ortholog); INVOLVED IN glucocorticoid metabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); corticosteroid-binding globulin deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular space (ortholog) NW_004955438 16356600 16380861 - 102014492 AGCD01035406;AGCD01035407;AGCD01035408;XM_013517149 XP_013372603 MODEL 9003340 protein-coding LOC102021325 serpin B9-like NW_004955465 10360723 10368587 - 102021325 AGCD01050507;XM_005398914 XP_005398971 MODEL 9056956 pseudo LOC102005895 mitochondrial fission factor-like NW_004955455 5401970 5404213 + 102005895 AGCD01045725 MODEL 39133876 misc_rna 7SK 7SK RNA 9028449 protein-coding Tstd2 thiosulfate sulfurtransferase like domain containing 2 NW_004955419 27820265 27841210 + 102023477 AGCD01020448;GBDJ01031238;XM_005382843;XM_005382844;XM_005382845;XM_005382847;XM_005382848 XP_005382900;XP_005382901;XP_005382902;XP_005382904;XP_005382905 MODEL 8998560 protein-coding LOC102003389 vomeronasal type-1 receptor 1-like NW_004955558 668713 669606 + 102003389 AGCD01073385;XM_005412740 XP_005412797 MODEL 9000017 protein-coding Reep4 receptor accessory protein 4 INVOLVED IN mitotic nuclear membrane reassembly (ortholog); nuclear envelope organization (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955403 45627750 45631481 - 102003719 AGCD01002824;GBBH01051322;XM_005373648;XM_013513770 XP_005373705;XP_013369224 MODEL 39133675 snorna U3 Small nucleolar RNA U3 8850642 protein-coding Golga4 golgin A4 ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Prostatic Neoplasms (ortholog); skin disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955421 4130040 4251968 + 102008540 AGCD01021680;AGCD01021681;AGCD01021682;AGCD01021683;AGCD01021684;AGCD01021685;AGCD01021686;GBCB01002191;XM_005383706;XM_005383707;XM_005383709;XM_013513730 XP_005383763;XP_005383764;XP_005383766;XP_013369184 MODEL 8810390 ncrna LOC102006898 uncharacterized LOC102006898 NW_004955414 6093328 6094333 - 102006898 AGCD01014908;GBBH01201308;XR_260154 MODEL 39132629 rrna 5S_rRNA 5S ribosomal RNA 8946988 ncrna LOC102012281 uncharacterized LOC102012281 NW_004955456 10060816 10063097 + 102012281 AGCD01046517;GBDF01293625;XR_262891 MODEL 10313168 protein-coding LOC106150045 putative HTLV-1-related endogenous sequence NW_004955462 9705194 9706002 - 106150045 AGCD01049341;GBDI01338053;XM_013521424 XP_013376878 MODEL 8879106 protein-coding Dnaaf1 dynein axonemal assembly factor 1 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN axoneme (ortholog) NW_004955564 132497 149399 - 102026049 AGCD01074187;GBCE01141752;GBDF01010850;XM_013509203 XP_013364657 MODEL 8812891 protein-coding Plac8l1 PLAC8 like 1 NW_004955415 7990558 8024998 + 102018489 AGCD01016060;AGCD01016061;AGCD01016062;AGCD01016063;GBDF01304882;XM_005380681;XM_005380682 XP_005380738;XP_005380739 MODEL 8799990 protein-coding Adi1 acireductone dioxygenase 1 ENCODES a protein that exhibits oxidoreductase activity (ortholog); INVOLVED IN L-methionine salvage from methylthioadenosine (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 3816428 3822663 + 102018293 AGCD01059294;GBDF01081975;XM_013504345 XP_013359799 MODEL 8966777 protein-coding B3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog) NW_004955524 3432797 3436941 - 102014706 AGCD01068897;GBBH01142850;GBDI01063068;XM_005409543 XP_005409600 MODEL 9031508 protein-coding Dydc1 DPY30 domain containing 1 FOUND IN radial spoke (ortholog) NW_004955510 319535 337268 - 102027211 AGCD01066145;GBDF01043580;XM_005407870 XP_005407927 MODEL 39134450 misc_rna 7SK 7SK RNA 8917902 protein-coding Arvcf ARVCF delta catenin family member ENCODES a protein that exhibits cadherin binding (ortholog); INVOLVED IN RNA splicing (ortholog); ASSOCIATED WITH COVID-19 (ortholog); DiGeorge syndrome (ortholog); long QT syndrome (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955442 18109421 18149969 + 102029232 AGCD01037997;AGCD01037998;GBDJ01339990;XM_005391761;XM_005391762;XM_013517785;XM_013517786;XM_013517787;XM_013517788;XM_013517789;XM_013517790;XM_013517791;XM_013517792;XM_013517793 XP_005391818;XP_005391819;XP_013373239;XP_013373240;XP_013373241;XP_013373242;XP_013373243;XP_013373244;XP_013373245;XP_013373246;XP_013373247 MODEL 39134140 misc_rna 7SK 7SK RNA 8765834 protein-coding Gca grancalcin ENCODES a protein that exhibits calcium ion binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); FOUND IN cytosol (ortholog) NW_004955449 11503201 11538809 - 102017289 AGCD01042091;GBBH01101864;XM_013518747;XM_013518748;XM_013518749;XM_013518750 XP_013374201;XP_013374202;XP_013374203;XP_013374204 MODEL 8756930 ncrna LOC102017923 uncharacterized LOC102017923 NW_004955559 666827 667985 + 102017923 AGCD01073607;GBBH01083168;XR_264997 MODEL 8908400 pseudo LOC102014925 zinc finger and BTB domain-containing protein 14 pseudogene NW_004955427 2090948 2097068 + 102014925 AGCD01026890 MODEL 8965289 pseudo LOC102010691 nudC domain-containing protein 2-like NW_004955475 11122125 11122610 - 102010691 AGCD01055143 MODEL 9000933 protein-coding Pdcl3 phosducin like 3 ENCODES a protein that exhibits protein folding chaperone (ortholog); vascular endothelial growth factor receptor 2 binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); cellular response to heat (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955470 6553450 6563814 + 102016045 AGCD01052773;GBDF01302066;XM_005400758 XP_005400815 MODEL 9000039 ncrna LOC102005117 uncharacterized LOC102005117 NW_004955460 7231987 7232762 - 102005117 AGCD01048479;GBDF01013953;XR_001236514;XR_263035 MODEL 9053976 protein-coding Thbd thrombomodulin ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN female pregnancy (ortholog); negative regulation of blood coagulation (ortholog); response to cAMP (ortholog); PARTICIPATES IN protein C anticoagulant pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955415 30222830 30226406 - 102029285 AGCD01016660;GBCC01028598;XM_005380959 XP_005381016 MODEL 8887911 protein-coding Hlx H2.0 like homeobox ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN animal organ development (ortholog); embryonic digestive tract morphogenesis (ortholog); enteric nervous system development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH childhood-onset asthma (ortholog) NW_004955520 2937131 2941170 - 102003999 AGCD01068086;GBBH01050416;GBCQ01073054;XM_013507075 XP_013362529 MODEL 8840978 protein-coding LOC102019533 olfactory receptor 6B2-like NW_004955542 1313123 1324139 + 102019533 AGCD01071502;XM_005411170 XP_005411227 MODEL 8962479 pseudo LOC102003391 pre-mRNA-splicing factor RBM22 pseudogene NW_004955443 7720328 7734609 + 102003391 AGCD01038296;AGCD01038297 MODEL 8974702 protein-coding Akap8 A-kinase anchoring protein 8 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cell cycle G2/M phase transition (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to prostaglandin E stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN condensed chromosome (ortholog); female pronucleus (ortholog); nuclear matrix (ortholog) NW_004955495 7874655 7893209 + 102008956 AGCD01062170;GBDF01160004;XM_005406082;XM_005406083 XP_005406139;XP_005406140 MODEL 39132478 snrna U6 U6 spliceosomal RNA 8876170 trna Trnav-uac transfer RNA valine (anticodon UAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955586;NW_004955418;NW_004955511;NW_004955511 762475;25922316;4044144;4043788 762547;25922388;4044216;4043860 +;-;-;- 101978800 AGCD01019379;AGCD01066488;AGCD01076044 MODEL 8811523 protein-coding Cfap58 cilia and flagella associated protein 58 INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); spermatogenic failure 49 (ortholog); FOUND IN centrosome (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955485 6208412 6319367 - 102021881 AGCD01058609;AGCD01058610;AGCD01058611;AGCD01058612;AGCD01058613;AGCD01058614;GBDI01366374;XM_005403772;XM_013504126 XP_005403829;XP_013359580 MODEL 8829011 protein-coding Psmd6 proteasome 26S subunit, non-ATPase 6 ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) NW_004955517 1874874 1886480 + 102017692 AGCD01067609;AGCD01067610;GBDF01002254;XM_005409021 XP_005409078 MODEL 10298459 ncrna LOC106147067 uncharacterized LOC106147067 NW_004955514 4005456 4007317 - 106147067 AGCD01067124;GBDF01249505;XR_001231783 MODEL 8815169 protein-coding Atp1b3 ATPase Na+/K+ transporting subunit beta 3 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN intracellular potassium ion homeostasis (ortholog); intracellular sodium ion homeostasis (ortholog); membrane repolarization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955508 3848745 3875992 - 102016938 AGCD01065839;AGCD01065840;AGCD01065841;AGCD01065842;AGCD01065843;GBDF01224103;XM_005407753;XM_013506258 XP_005407810;XP_013361712 MODEL 9068092 protein-coding Hck HCK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits lipid binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); intracellular signal transduction (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autoimmune disease (ortholog); Autoinflammation with Pulmonary and Cutaneous Vasculitis (ortholog); FOUND IN actin filament (ortholog); caveola (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955422 28934512 28986998 - 102011881 AGCD01023375;AGCD01023376;GBDK01277740;XM_005384880;XM_013514242 XP_005384937;XP_013369696 MODEL 8727902 ncrna LOC102024044 uncharacterized LOC102024044 NW_004955435 14761331 14782655 + 102024044 AGCD01033249;AGCD01033250;GBDF01046413;XR_001234869;XR_001234870;XR_261690;XR_261691;XR_261692;XR_261693;XR_261694 MODEL 8939024 pseudo LOC102019863 ferritin light chain pseudogene NW_004955568 7500 20509 - 102019863 AGCD01074499 MODEL 8866008 pseudo LOC102022327 60S ribosomal protein L32 pseudogene NW_004955437 21682919 21683367 + 102022327 AGCD01034919 MODEL 39131806 rrna 5S_rRNA 5S ribosomal RNA 8996948 protein-coding Ap4m1 adaptor related protein complex 4 subunit mu 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); Golgi to endosome transport (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN AP-4 adaptor complex (ortholog); early endosome (ortholog); trans-Golgi network (ortholog) NW_004955573 759222 763222 - 102030254 AGCD01075004;GBDI01178585;XM_005413751;XM_013509465 XP_005413808;XP_013364919 MODEL 9052128 protein-coding Fam187b family with sequence similarity 187 member B NW_004955468 4517513 4539959 - 102013494 AGCD01051912;AGCD01051913;AGCD01051914;AGCD01051915;AGCD01051916;GBDF01006134;XM_005400031;XM_005400032;XM_005400033 XP_005400088;XP_005400089;XP_005400090 MODEL 39131933 snrna U1 U1 spliceosomal RNA 8940178 ncrna LOC102009915 uncharacterized LOC102009915 NW_004955458 5401003 5402675 + 102009915 AGCD01047487;GBBH01073358;XR_262984 MODEL 8960874 protein-coding Ints10 integrator complex subunit 10 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nucleus (ortholog) NW_004955403 43519239 43546209 + 102022036 AGCD01002773;GBDF01049941;XM_005373620;XM_005373621;XM_005373622;XM_005373623;XM_013513619;XM_013513628 XP_005373677;XP_005373678;XP_005373679;XP_005373680;XP_013369073;XP_013369082 MODEL 8904836 protein-coding Trim33 tripartite motif containing 33 ENCODES a protein that exhibits co-SMAD binding (ortholog); promoter-specific chromatin binding (ortholog); R-SMAD binding (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of BMP signaling pathway (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH developmental dysplasia of the hip (ortholog); Developmental Dysplasia of the Hip 4 (ortholog); ovarian cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955435 17631596 17750261 - 102029788 AGCD01033362;AGCD01033363;AGCD01033364;GBDK01141829;XM_013516407 XP_013371861 MODEL 9055693 protein-coding LOC102012282 uroplakin-3b-like protein NW_004955456 15093798 15098628 + 102012282 AGCD01046662;GBDJ01177525;XM_005396824;XM_013520654 XP_005396881;XP_013376108 MODEL 9040476 protein-coding LOC102017173 vomeronasal type-2 receptor 116-like NW_004955563 2059415 2099231 - 102017173 AGCD01074170;AGCD01074171;AGCD01074172;AGCD01074173;AGCD01074174;AGCD01074175;AGCD01074176;AGCD01074177;AGCD01074178;AGCD01074179;XM_013509130 XP_013364584 MODEL 8859718 protein-coding Dnaaf10 dynein axonemal assembly factor 10 NW_004955424 16706272 16727483 + 102023818 AGCD01024748;AGCD01024749;GBCE01024448;XM_005385674 XP_005385731 MODEL 8849007 protein-coding Kiaa0319 KIAA0319 ortholog INVOLVED IN negative regulation of axon extension (ortholog); negative regulation of axon extension involved in regeneration (ortholog); negative regulation of dendrite development (ortholog); FOUND IN early endosome (ortholog); plasma membrane (ortholog) NW_004955483 2404061 2463210 + 102011123 AGCD01057676;AGCD01057677;AGCD01057678;GBDF01262006;XM_005403369;XM_005403370;XM_013503840 XP_005403426;XP_005403427;XP_013359294 MODEL 8865045 protein-coding Actr1a actin related protein 1A INVOLVED IN microtubule-based process (ortholog); spermatogenesis (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH colon cancer (ortholog); Down syndrome (ortholog); FOUND IN cell cortex (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955485 7926744 7944648 + 102015851 AGCD01058680;GBDF01044280;XM_005403835;XM_013504044 XP_005403892;XP_013359498 MODEL 10085659 protein-coding Bend5 BEN domain containing 5 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955464 9952128 9997938 + 106146240 AGCD01050118;GBDF01262049;XM_005398627;XM_013521736;XM_013521737 XP_005398684;XP_013377190;XP_013377191 MODEL 8983370 protein-coding Was WASP actin nucleation promoting factor ENCODES a protein that exhibits identical protein binding (ortholog); phospholipase binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin filament-based movement (ortholog); actin polymerization or depolymerization (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog); genetic disease (ortholog); hemorrhagic disease (ortholog); FOUND IN actin filament (ortholog); cell-cell junction (ortholog); cytosol (ortholog) NW_004955543 243618 253489 + 102022858 AGCD01071569;GBBH01116435;XM_005411273 XP_005411330 MODEL 8863113 protein-coding LOC102005897 keratin-associated protein 10-11-like NW_004955407 41627363 41628512 + 102005897 AGCD01007874;XM_005375888 XP_005375945 MODEL 39133877 misc_rna 7SK 7SK RNA 39134451 misc_rna 7SK 7SK RNA 8801421 protein-coding LOC102021328 alpha-2-macroglobulin-like NW_004955413 5885352 5996030 - 102021328 AGCD01013695;AGCD01013696;AGCD01013697;GBDI01211358;XM_005378888;XM_013511450;XM_013511451;XM_013511453;XR_260065 XP_005378945;XP_013366904;XP_013366905;XP_013366907 MODEL 8893335 protein-coding LOC102024046 trace amine-associated receptor 3-like NW_004955436 13181451 13182480 - 102024046 AGCD01033855;XM_013516587 XP_013372041 MODEL 8796399 protein-coding Top3a DNA topoisomerase III alpha ENCODES a protein that exhibits DNA topoisomerase type I (single strand cut, ATP-independent) activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN chromosome separation (ortholog); DNA topological change (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 5 (ortholog); genetic disease (ortholog); Microcephaly, Growth Restriction, and Increased Sister Chromatid Exchange 2 (ortholog); FOUND IN mitochondrion (ortholog); PML body (ortholog) NW_004955478 11015378 11045717 + 102020114 AGCD01056157;GBDF01128087;XM_005402278;XM_005402279 XP_005402335;XP_005402336 MODEL 8860404 protein-coding Reep5 receptor accessory protein 5 INVOLVED IN endoplasmic reticulum membrane organization (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum tubular network (ortholog); junctional sarcoplasmic reticulum membrane (ortholog) NW_004955418 2504028 2539574 + 102024676 AGCD01018771;AGCD01018772;GBDJ01073123;GBDK01008237;XM_005382341 XP_005382398 MODEL 9000067 protein-coding LOC102006902 serine protease inhibitor Kazal-type 9 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of proteolysis (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) NW_004955415 5971642 5977559 + 102006902 AGCD01016005;GBDJ01000916;XM_005380641;XM_013512380 XP_005380698;XP_013367834 MODEL 39131807 rrna 5S_rRNA 5S ribosomal RNA 8885404 pseudo LOC102005120 centromere protein H pseudogene NW_004955462 13884190 13890236 - 102005120 AGCD01049434 MODEL 8959704 protein-coding LOC102003392 WAP four-disulfide core domain protein 10A NW_004955445 11634309 11635726 - 102003392 AGCD01039708;GBDF01230954;XM_005392420 XP_005392477 MODEL 9055077 protein-coding Ap4s1 adaptor related protein complex 4 subunit sigma 1 ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 52 (ortholog); FOUND IN AP-4 adaptor complex (ortholog) NW_004955409 29482820 29530691 - 102014651 AGCD01010268;AGCD01010269;AGCD01010270;AGCD01010271;AGCD01010272;AGCD01010273;AGCD01010274;AGCD01010275;AGCD01010276;GBBH01057360;GBCB01041496;XM_013510385 XP_013365839 MODEL 8812605 protein-coding Adig adipogenin INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); lipid droplet formation (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); nucleus (ortholog) NW_004955445 18134107 18138198 - 102005854 AGCD01039898;GBDF01176282;XM_005392586 XP_005392643 MODEL 9029502 protein-coding Plac9 placenta associated 9 NW_004955437 13100613 13113555 + 102015764 AGCD01034646;GBDJ01176640;XM_005389884;XM_013517119;XM_013517120;XM_013517121 XP_005389941;XP_013372573;XP_013372574;XP_013372575 MODEL 8813664 protein-coding Caprin1 cell cycle associated protein 1 ENCODES a protein that exhibits ATP binding (ortholog); molecular condensate scaffold activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN generation of neurons (ortholog); intracellular mRNA localization (ortholog); membraneless organelle assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cerebellar ataxia (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955422 12126893 12170877 - 102018612 AGCD01022776;AGCD01022777;AGCD01022778;AGCD01022779;GBDF01011002;XM_005384149;XM_005384151 XP_005384206;XP_005384208 MODEL 8937339 trna Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978834 AGCD01005375;AGCD01048768;AGCD01051216;AGCD01051466;AGCD01051471;AGCD01057629 MODEL 8726600 protein-coding Serpina7 serpin family A member 7 ENCODES a protein that exhibits hormone binding (ortholog); INVOLVED IN post-embryonic development (ortholog); response to corticosterone (ortholog); response to nutrient levels (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); diabetic ketoacidosis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular space (ortholog) NW_004955548 2855377 2861946 - 102006287 AGCD01072411;GBDF01025901;XM_005412013 XP_005412070 MODEL 10130379 protein-coding LOC106147068 uncharacterized LOC106147068 NW_004955514 2589193 2590069 + 106147068 AGCD01067084;GBCE01063443;XM_013506860 XP_013362314 MODEL 8873090 protein-coding Psmd7 proteasome 26S subunit, non-ATPase 7 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); FOUND IN proteasome complex (ortholog); proteasome regulatory particle (ortholog); synaptic vesicle (ortholog) NW_004955484 6824467 6832251 + 102021244 AGCD01058294;GBDF01003955;XM_005403534 XP_005403591 MODEL 39134141 misc_rna 7SK 7SK RNA 8796947 pseudo LOC102017926 40S ribosomal protein S20 pseudogene NW_004955574 1288578 1289272 - 102017926 AGCD01075172 MODEL 9048969 protein-coding Golga5 golgin A5 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi vesicle transport (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH Thyroid Neoplasms (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); Golgi apparatus (ortholog) NW_004955438 14992710 15031297 + 102028339 AGCD01035356;AGCD01035357;AGCD01035358;GBDF01125139;XM_005390333 XP_005390390 MODEL 8908379 protein-coding Gcat glycine C-acetyltransferase PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955413 24184997 24192178 + 102011102 AGCD01014355;GBDJ01317225;XM_005379228 XP_005379285 MODEL 8770458 pseudo LOC102014928 RWD domain-containing protein 2B-like NW_004955428 12061416 12098598 + 102014928 AGCD01027919;AGCD01027920 MODEL 10332784 ncrna LOC106150046 uncharacterized LOC106150046 NW_004955462 9544598 9550462 + 106150046 AGCD01049339;GBDI01311494;XR_001236607 MODEL 39132630 rrna 5S_rRNA 5S ribosomal RNA 8902492 ncrna LOC102019535 uncharacterized LOC102019535 NW_004955439 136492 145739 + 102019535 AGCD01035579;AGCD01035580;GBDI01211031;XR_001235216 MODEL 39131934 snrna U1 U1 spliceosomal RNA 10170936 protein-coding B3gnt4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog) NW_004955482 6359967 6365344 - 106146514 AGCD01057387;GBCE01084791;GBDJ01028511;XM_013503651 XP_013359105 MODEL 8985416 protein-coding Akap8l A-kinase anchoring protein 8 like ENCODES a protein that exhibits histone deacetylase binding (ortholog); lamin binding (ortholog); INVOLVED IN cell cycle G2/M phase transition (ortholog); mitotic chromosome condensation (ortholog); mRNA processing (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955495 7839339 7874432 + 102008432 AGCD01062169;AGCD01062170;GBDF01004787;XM_005406080;XM_005406081 XP_005406137;XP_005406138 MODEL 8725832 protein-coding Dydc2 DPY30 domain containing 2 NW_004955510 337286 348640 + 102026895 AGCD01066145;GBDF01053016;XM_013506330 XP_013361784 MODEL 8760138 protein-coding Fgfr1 fibroblast growth factor receptor 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); auditory receptor cell development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN ceric oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acrocephalosyndactylia (ortholog); acute myeloid leukemia (ortholog); FOUND IN glutamatergic synapse (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955463 14013247 14064354 - 102024657 AGCD01049897;AGCD01049898;AGCD01049899;GBDJ01132958;XM_005398449;XM_013521506;XM_013521508;XM_013521509;XM_013521510;XM_013521511;XM_013521512 XP_005398506;XP_013376960;XP_013376962;XP_013376963;XP_013376964;XP_013376965;XP_013376966 MODEL 8762685 protein-coding Reep6 receptor accessory protein 6 INVOLVED IN detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); optic atrophy (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955764 17640 22996 - 102005875 AGCD01078306;GBCE01186476;XM_005415097;XM_005415099;XM_005415100;XM_013510188 XP_005415154;XP_005415156;XP_005415157;XP_013365642 MODEL 8757861 protein-coding Tstd3 thiosulfate sulfurtransferase like domain containing 3 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955411 25392449 25403237 + 102025555 AGCD01012155;GBCE01181628;GBDI01024644;XM_005377810 XP_005377867 MODEL 39133567 snorna U3 Small nucleolar RNA U3 39131321 protein-coding ARX aristaless related homeobox 8826608 pseudo LOC102010693 charged multivesicular body protein 1b-like NW_004955416 11825639 11828480 - 102010693 AGCD01017192 MODEL 9059074 protein-coding Hcls1 hematopoietic cell-specific Lyn substrate 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN actin filament organization (ortholog); cellular response to cytokine stimulus (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955427 20999934 21020401 - 102003788 AGCD01027431;GBBH01090130;XM_005386490 XP_005386547 MODEL 8851458 protein-coding Atp1b4 ATPase Na+/K+ transporting family member beta 4 INVOLVED IN regulation of DNA-templated transcription (ortholog); transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; FOUND IN chromatin (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) NW_004955572 1507290 1524359 - 102005526 AGCD01074954;GBDI01089270;XM_005413663;XM_005413664;XM_005413665;XM_013509443 XP_005413720;XP_005413721;XP_005413722;XP_013364897 MODEL 8918502 protein-coding Kiaa0319l KIAA0319 like FOUND IN cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955452 13538524 13649823 - 102019019 AGCD01044421;AGCD01044422;AGCD01044423;AGCD01044424;AGCD01044425;AGCD01044426;AGCD01044427;AGCD01044428;AGCD01044429;GBBH01115551;XM_005395143;XM_005395144;XM_005395145 XP_005395200;XP_005395201;XP_005395202 MODEL 8899852 protein-coding LOC102005899 uncharacterized LOC102005899 NW_004955408 4190159 4193209 - 102005899 AGCD01008091;GBDI01371406;XM_005376117 XP_005376174 MODEL 126903041 protein-coding DYDC2 DPY30 domain containing 2 8699706 protein-coding Dnaaf11 dynein axonemal assembly factor 11 INVOLVED IN axonemal dynein complex assembly (ortholog); cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); ASSOCIATED WITH bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); infertility (ortholog); FOUND IN apical cytoplasm (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955461 7204165 7311524 - 102012512 AGCD01048917;GBDI01260030;XM_005398014;XM_005398015;XM_005398016;XM_013521348 XP_005398071;XP_005398072;XP_005398073;XP_013376802 MODEL 39133878 misc_rna 7SK 7SK RNA 8755955 protein-coding Pde10a phosphodiesterase 10A ENCODES a protein that exhibits 3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); cAMP binding (ortholog); INVOLVED IN cAMP catabolic process (ortholog); cGMP catabolic process (ortholog); regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); Infantile-Onset Limb and Orofacial Dyskinesia (ortholog); FOUND IN cytosol (ortholog); extrinsic component of postsynaptic density membrane (ortholog); glutamatergic synapse (ortholog) NW_004955439 16114530 16370648 + 102030348 AGCD01036018;AGCD01036019;AGCD01036020;AGCD01036021;AGCD01036022;GBDF01010059;XM_005390671 XP_005390728 MODEL 9028304 protein-coding Psmd8 proteasome 26S subunit, non-ATPase 8 INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); synaptic vesicle (ortholog) NW_004955468 1044940 1052130 - 102016041 AGCD01051749;GBBH01033976;XM_013522469 XP_013377923 MODEL 8777181 protein-coding Hm13 histocompatibility minor 13 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); peptidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein intracellular domain proteolysis (ortholog); membrane protein proteolysis (ortholog); ASSOCIATED WITH Herpesviridae Infections (ortholog); steatotic liver disease (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); Derlin-1 retrotranslocation complex (ortholog) NW_004955422 29365722 29408788 - 102020578 AGCD01023393;GBCE01082590;XM_005384908;XM_005384909;XM_005384910;XM_005384911;XR_001233957 XP_005384965;XP_005384966;XP_005384967;XP_005384968 MODEL 9045983 ncrna LOC102012286 uncharacterized LOC102012286 NW_004955408 21941027 22001034 + 102012286 AGCD01008567;GBBH01167569;XR_001232370;XR_259698 MODEL 8977115 protein-coding Cfap61 cilia and flagella associated protein 61 INVOLVED IN flagellated sperm motility (ortholog); sperm flagellum assembly (ortholog); sperm mitochondrial sheath assembly (ortholog); ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); spermatogenic failure 84 (ortholog); FOUND IN axoneme (ortholog); manchette (ortholog); radial spoke stalk (ortholog) NW_004955415 28171364 28389356 + 102021436 AGCD01016638;AGCD01016639;AGCD01016640;GBDF01048452;XM_013512185;XM_013512186;XM_013512187;XM_013512188 XP_013367639;XP_013367640;XP_013367641;XP_013367642 MODEL 8963459 protein-coding Golga7 golgin A7 INVOLVED IN Golgi to plasma membrane protein transport (ortholog); Golgi to plasma membrane transport (ortholog); post-translational protein modification (ortholog); FOUND IN Golgi membrane (ortholog); Golgi stack (ortholog); palmitoyltransferase complex (ortholog) NW_004955536 1386760 1408628 - 102014394 AGCD01070756;GBDF01082272;XM_005410528 XP_005410585 MODEL 8787801 protein-coding Top3b DNA topoisomerase III beta ENCODES a protein that exhibits RNA topoisomerase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); FOUND IN condensed chromosome (ortholog); nucleus (ortholog) NW_004955442 17201079 17223824 + 102011701 AGCD01037946;GBBH01143487;XM_005391689;XM_005391690;XM_005391691;XM_005391692;XM_005391693;XM_013517987 XP_005391746;XP_005391747;XP_005391748;XP_005391749;XP_005391750;XP_013373441 MODEL 8937841 protein-coding Ints11 integrator complex subunit 11 ENCODES a protein that exhibits RNA endonuclease activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA 3'-end processing (ortholog); ASSOCIATED WITH neurodevelopmental disorder with motor and language delay, ocular defects, and brain abnormalities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) NW_004955486 9479057 9491629 + 102026531 AGCD01059188;GBBH01141476;XM_005404242 XP_005404299 MODEL 8748365 pseudo LOC102019537 V-type proton ATPase subunit E 1-like NW_004955545 693641 698066 + 102019537 AGCD01071813 MODEL 8809439 pseudo LOC102019864 uncharacterized LOC102019864 NW_004955445 529643 552759 - 102019864 AGCD01039319 MODEL 39131499 protein-coding PLAC9 placenta associated 9 8890888 protein-coding LOC102022332 uncharacterized LOC102022332 NW_004955442 5825456 5861268 - 102022332 AGCD01037570;AGCD01037571;GBBH01202596;XM_005391147;XM_013517640 XP_005391204;XP_013373094 MODEL 8914499 protein-coding Bend6 BEN domain containing 6 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); FOUND IN nucleus (ortholog) NW_004955502 3123024 3152121 - 102027550 AGCD01064310;GBDF01305622;XM_005406887 XP_005406944 MODEL 9049996 protein-coding Wasf1 WASP family member 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); ASSOCIATED WITH COVID-19 (ortholog); generalized epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog); mitochondrial outer membrane (ortholog) NW_004955411 34893287 34966670 - 102022176 AGCD01012417;AGCD01012418;GBDF01123264;XM_005377883;XM_005377884;XM_013510825 XP_005377940;XP_005377941;XP_013366279 MODEL 8877441 protein-coding Serpina9 serpin family A member 9 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog) NW_004955438 17862064 17875490 + 102020957 AGCD01035456;XM_013517148 XP_013372602 MODEL 8871452 protein-coding Reg4 regenerating family member 4 ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); mannan binding (ortholog); INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 22886351 22895884 - 102018638 AGCD01033523;XM_005389090 XP_005389147 MODEL 9037244 protein-coding Arx aristaless related homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon guidance (ortholog); cell proliferation in forebrain (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Aicardi syndrome (ortholog); autistic disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955509 5326145 5338250 - 102023829 AGCD01066100;AGCD01066101;AGCD01066102;GBCB01025528;GBCB01040697;XM_013506289 XP_013361743 MODEL 8838594 protein-coding LOC102021330 olfactory receptor 51A4-like NW_004955414 20549923 20550842 - 102021330 AGCD01015380;XM_013511771 XP_013367225 MODEL 8850626 ncrna LOC102006910 uncharacterized LOC102006910 NW_004955417 25248421 25254129 - 102006910 AGCD01018475;XR_260493 MODEL 10106038 ncrna LOC106150047 uncharacterized LOC106150047 NW_004955462 4091267 4100236 - 106150047 AGCD01049216;GBDK01272450;XR_001236608 MODEL 8832471 pseudo LOC102017177 protein slowmo homolog 2 pseudogene NW_004955447 18086601 18087624 + 102017177 AGCD01041153 MODEL 8752802 protein-coding Trim35 tripartite motif containing 35 INVOLVED IN innate immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955403 49821150 49841634 - 102003612 AGCD01002951;GBDK01146352;XM_005373737 XP_005373794 MODEL 8786793 protein-coding Actr1b actin related protein 1B ASSOCIATED WITH Duane retraction syndrome (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955470 4328895 4336441 - 102026312 AGCD01052729;GBCB01006391;XM_005400694;XM_013522835;XM_013522837 XP_005400751;XP_013378289;XP_013378291 MODEL 9010093 protein-coding Adipoq adiponectin, C1Q and collagen domain containing ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); brown fat cell differentiation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); amyloidosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955420 20911181 20922992 - 102027858 AGCD01021111;GBCB01001605;XM_005383261;XM_005383262 XP_005383318;XP_005383319 MODEL 8856931 protein-coding Caprin2 caprin family member 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of dendrite morphogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955505 4431921 4477434 + 102012880 AGCD01065113;AGCD01065114;GBBH01155285;GBDF01011219;XM_013505958 XP_013361412 MODEL 39131483 protein-coding THBD thrombomodulin 39134142 misc_rna 7SK 7SK RNA 8830207 protein-coding Fam193a family with sequence similarity 193 member A INVOLVED IN positive regulation of signal transduction by p53 class mediator (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955514 1588882 1672292 + 102025496 AGCD01067058;GBCE01024294;XM_005408737;XM_013506797;XM_013506798;XR_264493 XP_005408794;XP_013362251;XP_013362252 MODEL 9052000 pseudo LOC102009916 KATNB1-like protein 1 pseudogene NW_004955458 3895009 3896301 + 102009916 AGCD01047353 MODEL 39132479 snrna U6 U6 spliceosomal RNA 8917478 pseudo LOC102014929 syntaxin-5-like NW_004955429 9245936 9259113 + 102014929 AGCD01028637 MODEL 8895412 protein-coding Bend7 BEN domain containing 7 NW_004955429 20674390 20756760 + 102010079 AGCD01028988;AGCD01028989;AGCD01028990;GBCE01135033;GBDK01082325;XM_005387164 XP_005387221 MODEL 8915934 protein-coding Atp23 ATP23 metallopeptidase and ATP synthase assembly factor homolog FOUND IN cell junction (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955458 5632679 5650270 + 102003948 AGCD01047515;AGCD01047516;AGCD01047517;AGCD01047518;AGCD01047519;GBCB01041142;GBDJ01389434;XM_013521026 XP_013376480 MODEL 39132637 rrna 5S_rRNA 5S ribosomal RNA 9066446 protein-coding Hcn1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 ENCODES a protein that exhibits cAMP binding (ortholog); identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); INVOLVED IN apical protein localization (ortholog); cellular response to cAMP (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955446 17146915 17457843 + 102028912 AGCD01040370;AGCD01040371;GBDF01269259;XM_005392730 XP_005392787 MODEL 8970117 protein-coding Kiaa0408 KIAA0408 ortholog NW_004955436 8452558 8471086 - 102008977 AGCD01033742;GBCB01089871;XM_005389171;XM_013516630 XP_005389228;XP_013372084 MODEL 15036850 trna Trnay-aua transfer RNA tyrosine (anticodon AUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978818 8954218 pseudo LOC102003393 zinc finger protein 14-like NW_004955569 1162650 1186999 - 102003393 AGCD01074643;XM_005413495 MODEL 39131935 snrna U1 U1 spliceosomal RNA 8719625 protein-coding Ap5b1 adaptor related protein complex 5 subunit beta 1 INVOLVED IN endosomal transport (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog) NW_004955422 19544255 19547212 + 102028981 AGCD01023018;GBCE01085788;GBDK01317435;XM_005384462 XP_005384519 MODEL 8847982 protein-coding Pde11a phosphodiesterase 11A ENCODES a protein that exhibits 3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity (ortholog); cGMP binding (ortholog); INVOLVED IN negative regulation of cAMP/PKA signal transduction (ortholog); negative regulation of receptor guanylyl cyclase signaling pathway (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Bardet-Biedl syndrome 16 (ortholog); primary pigmented nodular adrenocortical disease 2 (ortholog); schizophrenia (ortholog); FOUND IN cytosol (ortholog); perikaryon (ortholog) NW_004955403 18804789 19180612 + 102004877 AGCD01002114;AGCD01002115;AGCD01002116;AGCD01002117;AGCD01002118;AGCD01002119;GBDF01055985;XM_005373398 XP_005373455 MODEL 10132148 ncrna LOC106147069 uncharacterized LOC106147069 NW_004955515 3679018 3718431 + 106147069 AGCD01067298;AGCD01067299;AGCD01067300;AGCD01067301;GBDI01252675;XR_001231785 MODEL 8793170 ncrna LOC102012289 uncharacterized LOC102012289 NW_004955410 7716614 7721059 + 102012289 AGCD01010722;GBDK01172238;XR_259826 MODEL 39134452 misc_rna 7SK 7SK RNA 39133678 snorna U3 Small nucleolar RNA U3 8969637 protein-coding Top6bl TOP6B like initiator of meiotic double strand breaks INVOLVED IN meiotic DNA double-strand break formation (ortholog); reciprocal meiotic recombination (ortholog); ASSOCIATED WITH Hydatidiform Mole, Recurrent, 4 (ortholog) NW_004955422 18541350 18726269 - 102019710 AGCD01022951;AGCD01022952;AGCD01022953;AGCD01022954;AGCD01022955;AGCD01022956;AGCD01022957;AGCD01022958;AGCD01022959;AGCD01022960;GBDF01145171;XM_013513887;XM_013513888;XM_013513889;XM_013513890;XM_013513891;XM_013513892;XM_013513893;XM_013513894;XM_013513895;XM_013513896;XM_013513897;XM_013513898;XM_013513899;XM_013513900;XM_013513901;XM_013513902 XP_013369341;XP_013369342;XP_013369343;XP_013369344;XP_013369345;XP_013369346;XP_013369347;XP_013369348;XP_013369349;XP_013369350;XP_013369351;XP_013369352;XP_013369353;XP_013369354;XP_013369355;XP_013369356 MODEL 8960233 protein-coding LOC102024047 uncharacterized LOC102024047 NW_004955436 1581428 1589015 - 102024047 AGCD01033580;AGCD01033581;GBDF01020972;XM_013516580 XP_013372034 MODEL 8908894 protein-coding Ints12 integrator complex subunit 12 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nuclear body (ortholog) NW_004955496 3564548 3580178 + 102008746 AGCD01062296;GBDF01052169;XM_005406221 XP_005406278 MODEL 8741147 protein-coding Trim36 tripartite motif containing 36 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN acrosome reaction (ortholog); mitotic cytokinesis (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH anencephaly (ortholog); Anencephaly 1 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 34909194 34939635 - 102021524 AGCD01008924;GBDF01006446;GBDK01026073;XM_013506978 XP_013362432 MODEL 8712499 ncrna LOC102005902 uncharacterized LOC102005902 NW_004955409 9536684 9555161 + 102005902 AGCD01009443;AGCD01009444;GBDF01156061;XR_259761 MODEL 8928724 pseudo LOC102017928 cyclin-G1 pseudogene NW_004955448 7013104 7014073 + 102017928 AGCD01041398 MODEL 8715506 protein-coding LOC102010697 olfactory receptor 2L3-like NW_004955418 30109107 30110042 + 102010697 AGCD01019503;XM_005382366 XP_005382423 MODEL 39133879 misc_rna 7SK 7SK RNA 39131808 rrna 5S_rRNA 5S ribosomal RNA 8736802 protein-coding Dym dymeclin ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN bone development (ortholog); Golgi organization (ortholog); ASSOCIATED WITH connective tissue disease (ortholog); Dyggve-Melchior-Clausen disease (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955402 34150783 34541944 - 102011262 AGCD01000852;AGCD01000853;AGCD01000854;AGCD01000855;AGCD01000856;AGCD01000857;AGCD01000858;AGCD01000859;AGCD01000860;AGCD01000861;AGCD01000862;GBDK01133357;XM_005372905;XM_005372906 XP_005372962;XP_005372963 MODEL 8768235 protein-coding LOC102005121 cysteine-rich secretory protein 3-like NW_004955411 8128236 8151585 + 102005121 AGCD01011719;GBBH01140337;XM_005377667 XP_005377724 MODEL 8822377 protein-coding B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 ENCODES a protein that exhibits lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity (ortholog); INVOLVED IN central nervous system development (ortholog) NW_004955420 24029867 24061801 - 102004824 AGCD01021270;GBDI01088265;XM_005383366;XM_005383367;XM_013513469;XR_001233722;XR_001233723 XP_005383423;XP_005383424;XP_013368923 MODEL 8972184 protein-coding LOC102006911 zinc finger protein 14-like NW_004955417 31668874 31705932 - 102006911 AGCD01018660;AGCD01018661;AGCD01018662;GBCE01006196;XM_005381977;XM_013512776 XP_005382034;XP_013368230 MODEL 8978905 protein-coding Akap9 A-kinase anchoring protein 9 ENCODES a protein that exhibits molecular adaptor activity (ortholog); potassium channel activator activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); maintenance of centrosome location (ortholog); microtubule nucleation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH amyloidosis (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); Arsenic Poisoning (ortholog); FOUND IN 9+2 motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955432 8933037 9090872 + 102025829 AGCD01030891;AGCD01030892;GBDJ01000790;XM_005388001;XM_013515942;XM_013515943;XM_013515944;XM_013515945;XM_013515946;XM_013515947 XP_005388058;XP_013371396;XP_013371397;XP_013371398;XP_013371399;XP_013371400;XP_013371401 MODEL 8721935 protein-coding Hmbox1 homeobox containing 1 ENCODES a protein that exhibits double-stranded telomeric DNA binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); telomere maintenance via telomerase (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 51199547 51377249 + 102016774 AGCD01002988;AGCD01002989;GBDF01220457;XM_005373783;XM_005373787;XM_005373788;XM_005373789;XM_005373790;XM_013514363 XP_005373840;XP_005373844;XP_005373845;XP_005373846;XP_005373847;XP_013369817 MODEL 9010852 protein-coding Fgfr1op2 FGFR1 oncogene partner 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN wound healing (ortholog); ASSOCIATED WITH myeloid neoplasm (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 21814133 21843105 + 102006561 AGCD01014267;AGCD01014268;GBDF01126930;XM_005379112;XM_005379113;XM_005379114;XM_005379115 XP_005379169;XP_005379170;XP_005379171;XP_005379172 MODEL 8967727 protein-coding Cfap65 cilia and flagella associated protein 65 INVOLVED IN acrosome assembly (ortholog); cilium movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); prostate cancer (ortholog); schizophrenia (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal central apparatus (ortholog); cytoplasm (ortholog) NW_004955453 14394853 14431774 + 102024756 AGCD01044864;GBDK01088182;XM_005395597;XM_005395609;XM_005395610;XM_013519777;XM_013519778;XM_013519779;XM_013519780;XM_013519781;XM_013519782;XM_013519783;XM_013519784;XM_013519785;XM_013519786 XP_005395654;XP_005395666;XP_005395667;XP_013375231;XP_013375232;XP_013375233;XP_013375234;XP_013375235;XP_013375236;XP_013375237;XP_013375238;XP_013375239;XP_013375240 MODEL 9010559 ncrna LOC102019538 uncharacterized LOC102019538 NW_004955441 8245514 8252301 - 102019538 AGCD01036978;GBDF01234852;XR_262058;XR_262059 MODEL 8972903 protein-coding Ttbk1 tau tubulin kinase 1 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of gene expression (ortholog); positive regulation of astrocyte activation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Childhood Schizophrenia (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); microtubule associated complex (ortholog); neuronal cell body (ortholog) NW_004955437 9161880 9195098 + 102005176 AGCD01034521;AGCD01034522;GBDF01162981;XM_005389756;XM_005389758;XM_013517133;XM_013517134;XM_013517135;XM_013517136 XP_005389813;XP_005389815;XP_013372587;XP_013372588;XP_013372589;XP_013372590 MODEL 8865245 protein-coding LOC102022333 olfactory receptor 4K2-like NW_004955550 537881 538840 - 102022333 AGCD01072509;XM_005412133 XP_005412190 MODEL 8956577 protein-coding Plag1 PLAG1 zinc finger ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gland morphogenesis (ortholog); multicellular organism growth (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955454 15239042 15281669 - 102011950 AGCD01045490;GBDF01221602;XM_005396081;XM_013520253 XP_005396138;XP_013375707 MODEL 8858887 protein-coding Gcc1 GRIP and coiled-coil domain containing 1 ASSOCIATED WITH cannabis abuse (ortholog); Cocaine-Related Disorders (ortholog); phencyclidine abuse (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) NW_004955479 8636274 8642027 - 102022917 AGCD01056451;GBBH01036831;XM_005402361 XP_005402418 MODEL 8973871 protein-coding Actr2 actin related protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal protein binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); associative learning (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); colorectal carcinoma (ortholog); intellectual disability (ortholog); FOUND IN actin cap (ortholog); Arp2/3 protein complex (ortholog); cell cortex (ortholog) NW_004955424 19293949 19333170 - 102003465 AGCD01024814;AGCD01024815;GBDK01029184;XM_005385690;XM_005385691 XP_005385747;XP_005385748 MODEL 8948569 protein-coding Wasf2 WASP family member 2 ENCODES a protein that exhibits protein kinase A binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); ameboidal-type cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; FOUND IN cell-cell junction (ortholog); early endosome (ortholog); lamellipodium (ortholog) NW_004955452 6658854 6733964 - 102004775 AGCD01044118;AGCD01044119;AGCD01044120;AGCD01044121;AGCD01044122;AGCD01044123;AGCD01044124;GBCE01074273;XM_005394909;XM_013519649 XP_005394966;XP_013375103 MODEL 41410890 protein-coding REG4 rerating family member 4 8861009 protein-coding Dnaaf19 dynein axonemal assembly factor 19 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); determination of digestive tract left/right asymmetry (ortholog); ASSOCIATED WITH infertility (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog) NW_004955451 17690148 17693285 + 102018792 AGCD01043767;GBBH01124071;XM_005394546;XM_005394547;XM_005394548;XM_005394549;XM_013519374;XM_013519375;XM_013519376 XP_005394603;XP_005394604;XP_005394605;XP_005394606;XP_013374828;XP_013374829;XP_013374830 MODEL 8816075 protein-coding Serpinb1 serpin family B member 1 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); inflammatory response (ortholog); negative regulation of cell migration (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); extracellular region (ortholog) NW_004955465 10541562 10551417 + 102025988 AGCD01050510;GBDI01218214;XM_005398929 XP_005398986 MODEL 8916024 protein-coding Psmd9 proteasome 26S subunit, non-ATPase 9 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of insulin secretion (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); proteasome regulatory particle, base subcomplex (ortholog) NW_004955482 6555902 6567481 - 102009946 AGCD01057403;GBCB01039020;XM_005403105 XP_005403162 MODEL 8755020 pseudo LOC102021335 interferon alpha-4-like NW_004955472 12915361 12916194 + 102021335 AGCD01053825 MODEL 8931485 protein-coding Best1 bestrophin 1 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN chloride transport (ortholog); detection of light stimulus involved in visual perception (ortholog); gamma-aminobutyric acid secretion, neurotransmission (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH autosomal dominant vitreoretinochoroidopathy (ortholog); bestrophinopathy (ortholog); cone-rod dystrophy (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); chloride channel complex (ortholog) NW_004955511 5773025 5783800 - 102007797 AGCD01066581;GBDF01053629;XM_005408133;XM_005408134;XM_013506425;XM_013506426;XR_001231698 XP_005408190;XP_005408191;XP_013361879;XP_013361880 MODEL 39132643 rrna 5S_rRNA 5S ribosomal RNA 8804196 ncrna LOC102014931 uncharacterized LOC102014931 NW_004955431 6309480 6358228 + 102014931 AGCD01030054;GBBH01052229;XR_001234631;XR_001234632;XR_001234633;XR_001234634;XR_001234635;XR_261459 MODEL 10083664 ncrna LOC106150048 uncharacterized LOC106150048 NW_004955462 6088921 6150885 - 106150048 AGCD01049271;AGCD01049272;GBCE01165438;XR_001236610 MODEL 8930983 protein-coding Fam193b family with sequence similarity 193 member B FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955408 29756057 29788349 - 102030157 AGCD01008770;GBDJ01225357;XM_005376449;XM_005376451;XM_005376452;XM_005376455;XM_013506562;XM_013506567;XM_013506571;XM_013506572;XM_013506577;XM_013506583;XR_259726 XP_005376506;XP_005376508;XP_005376509;XP_005376512;XP_013362016;XP_013362021;XP_013362025;XP_013362026;XP_013362031;XP_013362037 MODEL 8753350 pseudo LOC102003398 ubiquitin domain-containing protein 2 pseudogene NW_004955633 68363 69344 + 102003398 AGCD01077591 MODEL 9008872 protein-coding Kiaa0513 KIAA0513 ortholog NW_004955541 437106 476131 + 102016197 AGCD01071352;GBDF01280306;XM_005410968;XM_005410969 XP_005411025;XP_005411026 MODEL 39131937 snrna U1 U1 spliceosomal RNA 8999207 protein-coding Dynap dynactin-associated protein NW_004955402 39169208 39173132 + 102026173 AGCD01000977;GBDI01343183;NM_001371758;XM_005372951 NP_001358687;XP_005373008 INFERRED 9002549 protein-coding LOC102019866 zinc finger protein 780A NW_004955578 1072644 1089241 + 102019866 AGCD01075508;AGCD01075509;GBCE01092222;XM_005414074;XM_005414075;XM_005414076;XM_005414077;XM_013509660 XP_005414131;XP_005414132;XP_005414133;XP_005414134;XP_013365114 MODEL 9046460 protein-coding Adipor1 adiponectin receptor 1 ENCODES a protein that exhibits adipokinetic hormone receptor activity (ortholog); adiponectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid oxidation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Diabetic Cardiomyopathies (ortholog); end stage renal disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 38939167 38955647 - 102003834 AGCD01006613;AGCD01006614;GBBH01088732;GBCB01021805;XM_013522468 XP_013377922 MODEL 39133679 snorna U3 Small nucleolar RNA U3 8848473 protein-coding Caps calcyphosine INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog) NW_004955495 3549455 3550965 - 102019612 AGCD01061862;GBCE01003994;XM_005405741 XP_005405798 MODEL 8973043 protein-coding Topaz1 testis and ovary specific TOPAZ 1 INVOLVED IN apoptotic process (ortholog); lncRNA transcription (ortholog); spermatocyte division (ortholog) NW_004955420 27048650 27106983 - 102011775 AGCD01021449;GBDF01250001;XM_013513516;XM_013513517;XM_013513518 XP_013368970;XP_013368971;XP_013368972 MODEL 8795534 pseudo LOC102010711 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955502 1434 3248 + 102010711 AGCD01064229 MODEL 39134143 misc_rna 7SK 7SK RNA 8903440 protein-coding As3mt arsenite methyltransferase ENCODES a protein that exhibits arsenite methyltransferase activity (ortholog); INVOLVED IN arsonoacetate metabolic process (ortholog); methylation (ortholog); response to arsenic-containing substance (ortholog); PARTICIPATES IN homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); Birth Weight (ortholog); FOUND IN cytosol (ortholog) NW_004955485 7576627 7599005 - 102009063 AGCD01058663;GBCE01032783;GBCE01032789;XM_005403818;XM_005403819 XP_005403875;XP_005403876 MODEL 8847509 protein-coding Trim37 tripartite motif containing 37 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AK119 ubiquitin ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aggresome assembly (ortholog); negative regulation of centriole replication (ortholog); negative regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Dwarfism (ortholog); Fibrous Dysplasia of Bone (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 3839757 4014178 + 102019228 AGCD01043075;AGCD01043076;AGCD01043077;AGCD01043078;AGCD01043079;AGCD01043080;AGCD01043081;AGCD01043082;AGCD01043083;AGCD01043084;AGCD01043085;AGCD01043086;AGCD01043087;XM_005393999;XM_013519212;XM_013519214;XM_013519215;XM_013519216;XM_013519217;XM_013519218;XM_013519219;XM_013519220;XM_013519221 XP_005394056;XP_013374666;XP_013374668;XP_013374669;XP_013374670;XP_013374671;XP_013374672;XP_013374673;XP_013374674;XP_013374675 MODEL 9024744 protein-coding Golga7b golgin A7 family member B ENCODES a protein that exhibits enzyme binding (ortholog) NW_004955507 3900093 3912175 + 102009088 AGCD01065639;GBCB01074511;XM_013506239;XM_013506240;XM_013506241;XM_013506242 XP_013361693;XP_013361694;XP_013361695;XP_013361696 MODEL 8979912 protein-coding Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); calcium-dependent ATPase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Alcohol Myopathy (ortholog); Brody myopathy (ortholog); Cachexia (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); H zone (ortholog); I band (ortholog) NW_004955493 6559995 6578461 - 102013308 AGCD01061119;GBCB01099818;XM_005405160 XP_005405217 MODEL 8925274 protein-coding Dnaaf2 dynein axonemal assembly factor 2 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium-dependent cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955409 13019941 13028378 + 102029154 AGCD01009586;AGCD01009587;GBDK01015151;XM_005376838 XP_005376895 MODEL 9001189 protein-coding Ap5m1 adaptor related protein complex 5 subunit mu 1 INVOLVED IN endosomal transport (ortholog); ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog); cytosol (ortholog); late endosome (ortholog) NW_004955466 11191511 11216274 + 102025777 AGCD01051085;GBDF01225513;XM_005399202 XP_005399259 MODEL 8749708 protein-coding B3gnt6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog) NW_004955414 14728067 14729896 - 102010895 AGCD01015156;XM_013512055 XP_013367509 MODEL 9017711 protein-coding Pde12 phosphodiesterase 12 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to dsRNA (ortholog); cellular response to interferon-alpha (ortholog); ASSOCIATED WITH Cardiovirus Infections (ortholog); respiratory syncytial virus infectious disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955430 7272911 7277726 + 102014594 AGCD01029342;GBDF01052386;XM_005387409 XP_005387466 MODEL 39134453 misc_rna 7SK 7SK RNA 9017246 ncrna LOC102019539 uncharacterized LOC102019539 NW_004955442 5261971 5277187 - 102019539 AGCD01037555;GBDF01056125;XR_262115 MODEL 8940744 protein-coding Thbs1 thrombospondin 1 ENCODES a protein that exhibits collagen V binding (ortholog); endopeptidase inhibitor activity (ortholog); extracellular matrix binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); blood coagulation, fibrin clot formation (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955416 6490034 6506419 + 102010897 AGCD01016946;GBBH01143942;XM_013512591 XP_013368045 MODEL 39131938 snrna U1 U1 spliceosomal RNA 39132480 snrna U6 U6 spliceosomal RNA 39133880 misc_rna 7SK 7SK RNA 39131809 rrna 5S_rRNA 5S ribosomal RNA 9033992 ncrna LOC102017181 uncharacterized LOC102017181 NW_004955402 45288759 45321351 + 102017181 AGCD01001133;AGCD01001134;AGCD01001135;GBDF01081512;XR_001237047;XR_259087;XR_259088 MODEL 39133604 snorna U3 Small nucleolar RNA U3 8807562 protein-coding Hcn2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); cellular response to aldosterone (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Chronic Cerebral Hypoperfusion (ortholog); Dental Pulp Exposure (ortholog); FOUND IN axon (ortholog); dendrite membrane (ortholog); dendritic shaft (ortholog) NW_004955495 7124060 7143730 - 102016722 AGCD01062119;AGCD01062120;GBBH01120908;GBDI01196254;XM_013505311 XP_013360765 MODEL 8905457 trna Trnay-gua transfer RNA tyrosine (anticodon GUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978819 AGCD01039088;AGCD01052488;AGCD01057606;AGCD01072575;AGCD01072578 MODEL 8759388 protein-coding Rel REL proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of interferon-beta production (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atrophic gastritis (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955424 22909035 22939651 - 102027422 AGCD01024993;AGCD01024994;GBBH01182330;XM_005385753;XM_013514714 XP_005385810;XP_013370168 MODEL 8710393 protein-coding LOC102005126 olfactory receptor 149-like NW_004955412 25061204 25062136 + 102005126 AGCD01013133;XM_005378414 XP_005378471 MODEL 8802976 ncrna LOC102012292 uncharacterized LOC102012292 NW_004955463 1605016 1606453 - 102012292 AGCD01049525;GBDJ01265798;XR_001236656 MODEL 10112753 ncrna LOC106147070 uncharacterized LOC106147070 NW_004955515 4129498 4133202 + 106147070 AGCD01067316;GBDJ01059081;XR_001231787;XR_001231788 MODEL 8758854 protein-coding Psme1 proteasome activator subunit 1 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); esophagus squamous cell carcinoma (ortholog) NW_004955409 36262114 36264996 - 102008384 AGCD01010454;GBCB01003421;XM_005377033;XM_013510409 XP_005377090;XP_013365863 MODEL 9039289 protein-coding Akip1 A-kinase interacting protein 1 INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH COVID-19 (ortholog); diastolic heart failure (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955414 24667718 24677556 + 102024215 AGCD01015552;GBDF01120946;XM_005380245;XM_005380246;XM_013512045;XM_013512046;XR_001233171 XP_005380302;XP_005380303;XP_013367499;XP_013367500 MODEL 8965650 ncrna LOC102024049 uncharacterized LOC102024049 NW_004955537 9950 26774 - 102024049 AGCD01070845;AGCD01070846;AGCD01070847;GBDF01112305;XR_264768 MODEL 8784657 protein-coding Hmbs hydroxymethylbilane synthase ENCODES a protein that exhibits amine binding (ortholog); carboxylic acid binding (ortholog); hydroxymethylbilane synthase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte differentiation (ortholog); cellular response to amine stimulus (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute intermittent porphyria (ortholog); Acute Intermittent Porphyria, Nonerythroid Variant (ortholog); FOUND IN axon (ortholog); condensed chromosome (ortholog); cytosol (ortholog) NW_004955412 20192519 20202635 + 102024985 AGCD01012996;GBCQ01034070;XM_005378299;XM_005378300;XM_013511074;XM_013511075 XP_005378356;XP_005378357;XP_013366528;XP_013366529 MODEL 8799698 protein-coding Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel regulator activity (ortholog); calcium ion binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome membrane docking (ortholog); calcium ion import into sarcoplasmic reticulum (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acrokeratosis verruciformis (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN apical ectoplasmic specialization (ortholog); calcium ion-transporting ATPase complex (ortholog); endoplasmic reticulum (ortholog) NW_004955482 7233336 7295754 + 102004070 AGCD01057449;AGCD01057450;AGCD01057451;AGCD01057452;GBCB01043523;GBDK01076268;XM_013503694;XR_001230987 XP_013359148 MODEL 8768006 protein-coding Cfap68 cilia and flagella associated protein 68 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955412 13605526 13609865 + 102020782 AGCD01012842;GBDF01001491;XM_005378086;XM_005378087 XP_005378143;XP_005378144 MODEL 8995041 protein-coding Fgfr2 fibroblast growth factor receptor 2 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axonogenesis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Acneiform Eruptions (ortholog); acrocephalosyndactylia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955551 2321190 2427000 - 102016104 AGCD01072709;AGCD01072710;AGCD01072711;AGCD01072712;GBBH01063359;GBCC01015608;XM_005412181 XP_005412238 MODEL 8935168 protein-coding LOC102005904 uncharacterized LOC102005904 NW_004955409 26016614 26049251 + 102005904 AGCD01010148;AGCD01010149;AGCD01010150;GBDF01305671;XM_005376937 XP_005376994 MODEL 9035499 protein-coding LOC102019867 olfactory receptor 14I1-like NW_004955581 883822 884757 - 102019867 AGCD01075701;XM_013509731 XP_013365185 MODEL 8854013 protein-coding Ttbk2 tau tubulin kinase 2 ENCODES a protein that exhibits kinesin binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cerebellar granular layer development (ortholog); cerebellar granule cell precursor tangential migration (ortholog); cerebellum development (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); genetic disease (ortholog); spastic ataxia (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955416 9412297 9518561 - 102026216 AGCD01017087;AGCD01017088;GBBH01036629;GBCE01141570;XM_013512442 XP_013367896 MODEL 9024072 protein-coding LOC102009925 olfactory receptor 8B12-like NW_004955412 25567776 25568708 - 102009925 AGCD01013160;XM_005378426 XP_005378483 MODEL 8727393 protein-coding Caps2 calcyphosine 2 INVOLVED IN brain-derived neurotrophic factor receptor signaling pathway (ortholog); cerebellum development (ortholog); dendrite development (ortholog) NW_004955405 14658335 14761708 - 102008053 AGCD01004931;AGCD01004932;AGCD01004933;GBDI01163209;XM_005374329;XM_005374330;XM_005374331;XM_005374332;XM_013517679;XM_013517680;XM_013517683;XM_013517685;XM_013517689 XP_005374386;XP_005374387;XP_005374388;XP_005374389;XP_013373133;XP_013373134;XP_013373137;XP_013373139;XP_013373143 MODEL 8932774 ncrna LOC102014932 uncharacterized LOC102014932 NW_004955513 5341697 5347388 - 102014932 AGCD01066967;GBCQ01118345;XR_264486 MODEL 8866244 protein-coding LOC102006914 olfactory receptor 1N2-like NW_004955419 5391871 5392860 + 102006914 AGCD01019805;XM_005382526 XP_005382583 MODEL 8837894 protein-coding Trim40 tripartite motif containing 40 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of protein catabolic process (ortholog); negative regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH irritant dermatitis (ortholog); FOUND IN IkappaB kinase complex (ortholog) NW_004955583 242054 260565 + 102029573 AGCD01075807;AGCD01075808;GBDF01180385;XM_005414342 XP_005414399 MODEL 8854285 protein-coding Fam199x family with sequence similarity 199, X-linked NW_004955548 1017047 1046580 + 102004011 AGCD01072353;AGCD01072354;AGCD01072355;GBDF01235220;XM_005412008;XM_013508529 XP_005412065;XP_013363983 MODEL 8880345 protein-coding Ints13 integrator complex subunit 13 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN centrosome localization (ortholog); mitotic spindle organization (ortholog); protein localization to nuclear envelope (ortholog); ASSOCIATED WITH Chloracne (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955413 21779417 21813804 - 102004920 AGCD01014265;AGCD01014266;AGCD01014267;GBCB01003595;XM_005379644 XP_005379701 MODEL 8902431 ncrna LOC102017938 uncharacterized LOC102017938 NW_004955667 50137 52914 - 102017938 AGCD01077927;AGCD01077928;GBDI01252369;XR_265181 MODEL 8881076 protein-coding LOC102003401 protein MTO1 homolog, mitochondrial-like NW_004955981 5824 8486 + 102003401 AGCD01078801;AGCD01078802;XM_013510212 XP_013365666 MODEL 8718318 protein-coding Dynap dynactin associated protein INVOLVED IN activation of protein kinase B activity (ortholog); cellular response to ergosterol (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955402 39097723 39142938 + 102004539 AGCD01000976;AGCD01000977;XM_013510770 XP_013366224 MODEL 9035971 protein-coding Plagl1 PLAG1 like zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); Stomach Neoplasms (ortholog); transient neonatal diabetes mellitus 1 (ortholog); FOUND IN nuclear body (ortholog) NW_004955436 16452797 16511872 + 102005503 AGCD01033919;AGCD01033920;GBBH01224118;XM_013516703 XP_013372157 MODEL 8916076 protein-coding LOC102012303 NADH-cytochrome b5 reductase 3 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); INVOLVED IN nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH breast cancer (ortholog); Congenital Methemoglobinemia (ortholog); congenital myopathy 1A (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 27971140 27979905 - 102012303 AGCD01014539;GBCB01020264;GBDI01016413;XM_013511507 XP_013366961 MODEL 8760889 protein-coding Adipor2 adiponectin receptor 2 ENCODES a protein that exhibits adipokinetic hormone receptor activity (ortholog); adiponectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to fatty acid (ortholog); female pregnancy (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); end stage renal disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955454 4243898 4327255 + 102025869 AGCD01045119;AGCD01045120;AGCD01045121;GBBH01142646;XM_005395954 XP_005396011 MODEL 8769604 protein-coding Psme2 proteasome activator subunit 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog) NW_004955409 36252847 36257021 + 102009919 AGCD01010454;GBDF01048370;XM_005377038 XP_005377095 MODEL 9015618 protein-coding Gcc2 GRIP and coiled-coil domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN Golgi ribbon formation (ortholog); Golgi to plasma membrane protein transport (ortholog); late endosome to Golgi transport (ortholog); ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); trans-Golgi network (ortholog) NW_004955470 12011606 12053625 + 102007649 AGCD01052917;AGCD01052918;GBBH01118856;GBDF01123288;XM_005400800;XM_013522791;XM_013522792 XP_005400857;XP_013378245;XP_013378246 MODEL 8834269 protein-coding LOC102003403 formin-like protein 1 NW_004955451 16903163 16906378 - 102003403 AGCD01043711;GBDF01002809;XM_005394500;XM_005394501;XM_013519234 XP_005394557;XP_005394558;XP_013374688 MODEL 8704062 pseudo LOC102019544 40S ribosomal protein S6 pseudogene NW_004955568 1456206 1472192 + 102019544 AGCD01074545 MODEL 39132482 snrna U6 U6 spliceosomal RNA 9003008 protein-coding LOC102010712 huntingtin-interacting protein M-like NW_004955503 3419013 3419370 - 102010712 AGCD01064627;GBDF01001006;GBDK01096844;XM_013505852 XP_013361306 MODEL 39132649 rrna 5S_rRNA 5S ribosomal RNA 39134144 misc_rna 7SK 7SK RNA 9036435 protein-coding Topbp1 DNA topoisomerase II binding protein 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); identical protein binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN broken chromosome clustering (ortholog); chromosome organization (ortholog); DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog); male germ cell nucleus (ortholog) NW_004955501 4907687 4974995 + 102028214 AGCD01064148;GBDF01083772;XM_005406814;XM_005406815;XM_013505749;XM_013505750;XM_013505751;XM_013505753;XR_264253 XP_005406871;XP_005406872;XP_013361203;XP_013361204;XP_013361205;XP_013361207 MODEL 9040590 protein-coding Best2 bestrophin 2 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); intracellularly ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); FOUND IN basolateral plasma membrane (ortholog); chloride channel complex (ortholog); cilium (ortholog) NW_004955415 31846053 31851628 + 102020907 AGCD01016698;GBCC01018119;XM_005381024 XP_005381081 MODEL 8876743 protein-coding Asah1 N-acylsphingosine amidohydrolase 1 ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); ceramide catabolic process (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); benign epilepsy with centrotemporal spikes (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955552 1623263 1660285 + 102020292 AGCD01072780;AGCD01072781;AGCD01072782;AGCD01072783;AGCD01072784;GBBH01090438;XM_005412192 XP_005412249 MODEL 39133514 snorna U3 Small nucleolar RNA U3 9057192 protein-coding LOC102017183 C-C motif chemokine 3-like NW_004955451 86252 88039 - 102017183 AGCD01042917;GBDK01356227;XM_013519438 XP_013374892 MODEL 10118818 ncrna LOC106150049 uncharacterized LOC106150049 NW_004955462 9262852 9264945 - 106150049 AGCD01049335;XR_001236612;XR_001236613;XR_001236614 MODEL 8787656 pseudo LOC102005128 adenylate kinase 4, mitochondrial pseudogene NW_004955412 30505705 30506289 - 102005128 AGCD01013301 MODEL 39134454 misc_rna 7SK 7SK RNA 8884607 protein-coding Ap5s1 adaptor related protein complex 5 subunit sigma 1 INVOLVED IN double-strand break repair via homologous recombination (ortholog); endosomal transport (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog); cytosol (ortholog); late endosome (ortholog) NW_004955415 14665450 14669456 + 102004803 AGCD01016304;GBDF01193099;XM_005380809;XM_005380810 XP_005380866;XP_005380867 MODEL 9012362 protein-coding Dnaaf3 dynein axonemal assembly factor 3 INVOLVED IN axonemal dynein complex assembly (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog) NW_004955567 1030467 1036562 + 102004018 AGCD01074454;AGCD01074455;GBBH01001932;GBDI01070144;XM_005413352 XP_005413409 MODEL 8965720 protein-coding Wasf3 WASP family member 3 INVOLVED IN lamellipodium assembly (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); oligodendrocyte development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); postsynapse (ortholog) NW_004955497 6100633 6190639 + 102028556 AGCD01062622;AGCD01062623;AGCD01062624;AGCD01062625;AGCD01062626;GBDF01158437;XM_005406347;XM_005406348;XM_005406349;XM_005406350 XP_005406404;XP_005406405;XP_005406406;XP_005406407 MODEL 8975913 protein-coding Actr3 actin related protein 3 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATPase binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); astrocyte differentiation (ortholog); asymmetric cell division (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Cognitive Dysfunction (ortholog); colorectal carcinoma (ortholog); FOUND IN actin filament (ortholog); apical ectoplasmic specialization (ortholog); apical tubulobulbar complex (ortholog) NW_004955459 15216914 15284013 - 102029596 AGCD01048312;AGCD01048313;AGCD01048314;AGCD01048315;AGCD01048316;AGCD01048317;AY533216;GBCC01000263;XM_005397698 AAS59419;XP_005397755 MODEL 8870031 protein-coding Serpinb11 serpin family B member 11 NW_004955402 47564631 47585486 + 102025638 AGCD01001191;GBBH01001457;XM_005373034 XP_005373091 MODEL 8902587 protein-coding Cfap69 cilia and flagella associated protein 69 INVOLVED IN flagellated sperm motility (ortholog); olfactory behavior (ortholog); positive regulation of fertilization (ortholog); ASSOCIATED WITH spermatogenic failure 24 (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); sperm midpiece (ortholog) NW_004955432 7501908 7569799 + 102021036 AGCD01030844;AGCD01030845;AGCD01030846;AGCD01030847;AGCD01030848;GBDI01322737;XM_005387987;XM_005387988;XM_005387990 XP_005388044;XP_005388045;XP_005388047 MODEL 39131939 snrna U1 U1 spliceosomal RNA 9020022 protein-coding Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); calcium ion transmembrane transporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport from cytosol to endoplasmic reticulum (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); Experimental Diabetes Mellitus (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); organelle membrane (ortholog); sarcoplasmic reticulum (ortholog) NW_004955467 12911679 12941322 + 102016039 AGCD01051659;GBBH01031864;GBDK01432511;XM_005399699 XP_005399756 MODEL 39131810 rrna 5S_rRNA 5S ribosomal RNA 8872828 protein-coding Plagl2 PLAG1 like zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chylomicron assembly (ortholog); lipid metabolic process (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); FOUND IN nucleus (ortholog) NW_004955422 28839021 28847255 + 102010704 AGCD01023372;GBCB01076356;GBDI01219915;XM_005384877 XP_005384934 MODEL 8937372 protein-coding Golgb1 golgin B1 INVOLVED IN chondrocyte proliferation (ortholog); protein localization to pericentriolar material (ortholog); ASSOCIATED WITH cleft palate (ortholog); osteochondrodysplasia (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955427 21022369 21108448 - 102004092 AGCD01027431;AGCD01027432;GBBH01089618;XM_005386495;XM_013515169;XM_013515170;XM_013515171;XM_013515172;XM_013515173;XM_013515174 XP_005386552;XP_013370623;XP_013370624;XP_013370625;XP_013370626;XP_013370627;XP_013370628 MODEL 8912504 protein-coding Kiaa0586 KIAA0586 ortholog INVOLVED IN cilium assembly (ortholog); regulation of establishment of protein localization (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); cerebellar hypoplasia (ortholog); cone-rod dystrophy (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) NW_004955466 12125559 12240991 + 102005127 AGCD01051113;AGCD01051114;AGCD01051115;GBDF01053235;XM_005399217;XM_013521975;XM_013521976 XP_005399274;XP_013377429;XP_013377430 MODEL 9057687 protein-coding Hcn3 hyperpolarization activated cyclic nucleotide gated potassium channel 3 ENCODES a protein that exhibits intracellularly cAMP-activated cation channel activity (ortholog); voltage-gated potassium channel activity (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to dopamine (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Dental Pulp Exposure (ortholog); Experimental Diabetes Mellitus (ortholog); Parkinson's disease (ortholog); FOUND IN axon (ortholog); cone cell pedicle (ortholog); dendrite (ortholog) NW_004955545 1730940 1744439 + 102005419 AGCD01071869;GBDF01211990;XM_005411599;XM_013508343 XP_005411656;XP_013363797 MODEL 8826170 protein-coding LOC102022334 zinc finger protein 227 NW_004955555 1633022 1640505 + 102022334 AGCD01073093;AGCD01073094;AGCD01073095;GBDF01014099;GBDJ01402956;XM_005412461 XP_005412518 MODEL 8911051 trna trnC(gca) tRNA-Cys MT 5191 5257 - 15822223 8774326 protein-coding Rela RELA proto-oncogene, NF-kB subunit ENCODES a protein that exhibits actinin binding (ortholog); ankyrin repeat binding (ortholog); chromatin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antiviral innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN ceramide signaling pathway; interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adenocarcinoma (ortholog); alcohol dependence (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 19602930 19612263 + 102030643 AGCD01023023;AGCD01023024;GBCE01054806;GBDK01101045;XM_005384468 XP_005384525 MODEL 8757341 protein-coding B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN keratan sulfate proteoglycan biosynthetic process (ortholog) NW_004955453 4178544 4180738 - 102007404 AGCD01044682;GBBH01150502;GBDJ01011170;XM_013519878 XP_013375332 MODEL 8889871 protein-coding LOC102014938 mitogen-activated protein kinase 1-like NW_004955433 19729134 19741948 - 102014938 AGCD01031867;XM_013516110 XP_013371564 MODEL 8904057 protein-coding Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase ENCODES a protein that exhibits antigen binding (ortholog); DNA binding (ortholog); DNA topoisomerase binding (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); ASSOCIATED WITH Choroideremia (ortholog); COVID-19 (ortholog); fundus dystrophy (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); gamma-tubulin complex (ortholog) NW_004955472 3073090 3076607 + 102015004 AGCD01053501;GBBH01173020;GBDF01118627;XM_013522944 XP_013378398 MODEL 8904253 ncrna LOC102024051 uncharacterized LOC102024051 NW_004955540 1528360 1541262 - 102024051 AGCD01071304;GBDF01156252;XR_001232115;XR_001232116 MODEL 9053322 protein-coding Trim41 tripartite motif containing 41 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to muramyl dipeptide (ortholog); defense response to virus (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955530 84683 95835 - 102004002 AGCD01069830;GBCB01060416;XM_005410099 XP_005410156 MODEL 8727687 protein-coding LOC102017939 olfactory receptor 6C75-like NW_004956324 2385 3341 + 102017939 AGCD01079433;XM_005415195 XP_005415252 MODEL 8965215 ncrna LOC102005907 uncharacterized LOC102005907 NW_004955410 11624781 11626736 - 102005907 AGCD01010829;GBDF01087824;XR_259837 MODEL 9012377 ncrna LOC102005131 uncharacterized LOC102005131 NW_004955413 25513569 25515865 - 102005131 AGCD01014408;AGCD01014409;GBDK01271867;XR_001233049;XR_260114 MODEL 39133881 misc_rna 7SK 7SK RNA 8735041 protein-coding Hmces 5-hydroxymethylcytosine binding, ES cell specific ENCODES a protein that exhibits DNA-(abasic site) binding (ortholog); DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); protein-DNA covalent cross-linking activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); interstrand cross-link repair (ortholog); FOUND IN replication fork (ortholog) NW_004955429 13616647 13638657 + 102012225 AGCD01028758;AGCD01028759;GBCQ01010395;XM_005387000;XM_005387001;XM_013515378 XP_005387057;XP_005387058;XP_013370832 MODEL 8810527 pseudo LOC102012305 60S ribosomal protein L26-like 1 pseudogene NW_004955468 11168153 11174462 - 102012305 AGCD01052119 MODEL 8930238 protein-coding Ttc1 tetratricopeptide repeat domain 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of neuroinflammatory response (ortholog); FOUND IN cytosol (ortholog) NW_004955408 13966957 14007238 + 102022786 AGCD01008379;GBDK01146252;XM_005376252;XM_005376253 XP_005376309;XP_005376310 MODEL 8874476 protein-coding LOC102009926 chromosome unknown open reading frame, human C12orf57 INVOLVED IN camera-type eye morphogenesis (ortholog); cognition (ortholog); corpus callosum morphogenesis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog) NW_004955413 4524236 4525760 + 102009926 AGCD01013621;GBDI01019226;XM_005378850 XP_005378907 MODEL 9065689 protein-coding Fgfr3 fibroblast growth factor receptor 3 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); axonogenesis involved in innervation (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); absence epilepsy (ortholog); acanthosis nigricans (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955514 1030244 1038590 + 102017151 AGCD01067032;GBCE01053787;GBCE01053789;XM_013506763 XP_013362217 MODEL 39132483 snrna U6 U6 spliceosomal RNA 8888817 protein-coding Capsl calcyphosine like INVOLVED IN angiogenesis (ortholog); endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); exudative vitreoretinopathy (ortholog) NW_004955426 20833508 20862356 - 102010285 AGCD01026575;GBCE01097061;XM_005386203;XM_013515010 XP_005386260;XP_013370464 MODEL 10176920 protein-coding LOC106147071 spermatogenesis-associated protein 31A6-like NW_004955515 3737183 3738035 + 106147071 AGCD01067302;GBBH01073597;XM_013506863 XP_013362317 MODEL 8991010 protein-coding Pde1a phosphodiesterase 1A ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN cGMP catabolic process (ortholog); regulation of smooth muscle cell apoptotic process (ortholog); regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Left Ventricular Hypertrophy (ortholog); FOUND IN neuronal cell body (ortholog); sperm flagellum (ortholog) NW_004955403 14906069 15202710 + 102016868 AGCD01002036;AGCD01002037;AGCD01002038;AGCD01002039;AGCD01002040;AGCD01002041;GBDJ01349990;XM_005373347;XM_005373349;XM_005373350;XM_005373351;XM_013512476;XM_013512480;XM_013512485;XM_013512495 XP_005373404;XP_005373406;XP_005373407;XP_005373408;XP_013367930;XP_013367934;XP_013367939;XP_013367949 MODEL 8800074 protein-coding Akirin1 akirin 1 INVOLVED IN myoblast migration involved in skeletal muscle regeneration (ortholog); negative regulation of satellite cell differentiation (ortholog); negative regulation of skeletal muscle satellite cell proliferation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 16607980 16624376 + 102021083 AGCD01044520;AGCD01044521;GBDF01008545;XM_005395237 XP_005395294 MODEL 8804866 protein-coding LOC102006916 olfactory receptor 13F1 NW_004955419 21914434 21915393 - 102006916 AGCD01020292;XM_005382939 XP_005382996 MODEL 8797197 protein-coding Fam200c family with sequence similarity 200 member C FOUND IN nucleoplasm (ortholog) NW_004955408 14262519 14266835 - 102025214 AGCD01008391;XM_005376260;XM_013508939 XP_005376317;XP_013364393 MODEL 8857471 protein-coding Ints14 integrator complex subunit 14 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955450 9892476 9925231 + 102005868 AGCD01042600;GBDK01320478;XM_005393717;XM_005393718 XP_005393774;XP_005393775 MODEL 9012944 protein-coding Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 ENCODES a protein that exhibits intracellularly cAMP-activated cation channel activity (ortholog); voltage-gated potassium channel activity (ortholog); voltage-gated potassium channel activity involved in SA node cell action potential depolarization (ortholog); INVOLVED IN cellular response to aldosterone (ortholog); cellular response to cAMP (ortholog); cellular response to cGMP (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); Brugada syndrome (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); HCN channel complex (ortholog) NW_004955450 4139852 4181377 + 102025639 AGCD01042455;AGCD01042456;GBDK01339573;XM_005393600 XP_005393657 MODEL 9047003 protein-coding Thbs2 thrombospondin 2 INVOLVED IN negative regulation of angiogenesis (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH Cerebral Hemorrhage (ortholog); diabetes mellitus (ortholog); diabetic angiopathy (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); platelet alpha granule (ortholog) NW_004955411 4315055 4347044 + 102023125 AGCD01011577;GBCE01137755;XM_005377646 XP_005377703 MODEL 8890107 pseudo LOC102024054 60S ribosomal protein L36 pseudogene NW_004955545 2470677 2471253 - 102024054 AGCD01071903 MODEL 9063620 ncrna LOC102005908 uncharacterized LOC102005908 NW_004955410 34743414 34763395 - 102005908 AGCD01011404;GBDF01221838;XR_001232718 MODEL 8924426 ncrna LOC102003404 uncharacterized LOC102003404 NW_004955404 18428351 18441554 + 102003404 AGCD01003616;GBDF01251601;XR_259317 MODEL 8780782 pseudo LOC102010717 probable ATP-dependent RNA helicase DDX41 NW_004955428 2954658 3061479 + 102010717 AGCD01027644;AGCD01027645;AGCD01027646;AGCD01027647;AGCD01027648 MODEL 39133882 misc_rna 7SK 7SK RNA 8986472 protein-coding Washc2c WASH complex subunit 2C ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); negative regulation of barbed-end actin filament capping (ortholog); protein localization to endosome (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); WASH complex (ortholog) NW_004955546 2718758 2764277 - 102018987 AGCD01072099;AGCD01072100;GBDI01070765;XM_013508426;XM_013508427;XM_013508428 XP_013363880;XP_013363881;XP_013363882 MODEL 39132654 rrna 5S_rRNA 5S ribosomal RNA 39131659 rrna 5S_rRNA 5S ribosomal RNA 10179051 ncrna LOC106150050 uncharacterized LOC106150050 NW_004955402 13908202 13918596 + 106150050 AGCD01000418;GBDF01289313;XR_001236616 MODEL 8804211 protein-coding Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); calcium ion transmembrane transporter activity (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion export across plasma membrane (ortholog); cellular response to corticosterone stimulus (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 30 (ortholog); autosomal dominant intellectual developmental disorder 66 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955405 26872379 26932270 - 102015279 AGCD01005205;GBBH01050604;XM_005374438;XM_005374440;XM_005374444;XM_013518195 XP_005374495;XP_005374497;XP_005374501;XP_013373649 MODEL 8777832 protein-coding Cfap70 cilia and flagella associated protein 70 INVOLVED IN cell morphogenesis (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); spermatogenic failure 41 (ortholog); FOUND IN axonemal central apparatus (ortholog); axoneme (ortholog); ciliary basal body (ortholog) NW_004955437 18424568 18480327 + 102019431 AGCD01034791;AGCD01034792;AGCD01034793;GBDF01010702;XM_005389984;XM_005389986;XM_013516744;XM_013516745;XM_013516746;XM_013516747;XM_013516748 XP_005390041;XP_005390043;XP_013372198;XP_013372199;XP_013372200;XP_013372201;XP_013372202 MODEL 9023297 protein-coding Asah2 N-acylsphingosine amidohydrolase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); ceramide biosynthetic process (ortholog); ceramide catabolic process (ortholog); ASSOCIATED WITH celiac disease (ortholog); liver disease (ortholog); FOUND IN caveola (ortholog); extracellular exosome (ortholog); extracellular space (ortholog) NW_004955425 5840355 5931891 + 102003466 AGCD01025357;AGCD01025358;AGCD01025359;GBCC01031228;XM_005385898;XM_013514922 XP_005385955;XP_013370376 MODEL 8905333 ncrna LOC102021336 uncharacterized LOC102021336 NW_004955415 19026977 19033625 - 102021336 AGCD01016460;GBDF01278713;XR_260302 MODEL 9017772 pseudo LOC102019868 ubiquitin-conjugating enzyme E2 variant 2-like NW_004955402 7846965 7847581 - 102019868 AGCD01000186 MODEL 39134455 misc_rna 7SK 7SK RNA 8822684 pseudo LOC102014939 non-POU domain-containing octamer-binding protein pseudogene NW_004955434 14917711 14918327 - 102014939 AGCD01032450 MODEL 8760533 protein-coding Dnaaf4 dynein axonemal assembly factor 4 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH dyslexia (ortholog); Kartagener syndrome (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955409 498450 523067 + 102010554 AGCD01009153;AGCD01009154;GBBH01166208;GBDF01157322;XM_013510266;XM_013510267;XM_013510268;XM_013510269;XM_013510270 XP_013365720;XP_013365721;XP_013365722;XP_013365723;XP_013365724 MODEL 8789110 protein-coding Capza1 capping actin protein of muscle Z-line subunit alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); cell junction assembly (ortholog); microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN brush border (ortholog); cell-cell junction (ortholog); cortical cytoskeleton (ortholog) NW_004955435 16048213 16087814 + 102004636 AGCD01033293;GBDF01080954;XM_005388962;XM_013516421 XP_005389019;XP_013371875 MODEL 8731970 protein-coding Akirin2 akirin 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); defense response to bacterium (ortholog); embryo development ending in birth or egg hatching (ortholog); ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleoplasm (ortholog) NW_004955411 14600106 14619374 - 102029487 AGCD01011922;AGCD01011923;GBCB01023416;GBCE01077564;XM_005377736 XP_005377793 MODEL 8786843 protein-coding Adissp adipose secreted signaling protein ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); FOUND IN extracellular space (ortholog) NW_004955415 14596522 14610181 - 102029737 AGCD01016300;GBCB01043999;XM_005380801 XP_005380858 MODEL 8870766 protein-coding Dync1h1 dynein cytoplasmic 1 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); identical protein binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to nerve growth factor stimulus (ortholog); establishment of spindle localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955538 1388595 1458166 + 102025509 AGCD01071057;AGCD01071058;AGCD01071059;AGCD01071060;AGCD01071061;AGCD01071062;AGCD01071063;GBBH01031319;GBCB01112090;XM_013507827;XM_013507828 XP_013363281;XP_013363282 MODEL 8835734 protein-coding LOC102019545 death-inducer obliterator 1-like NW_004955445 36374 39104 - 102019545 AGCD01039300;GBCE01129387;XM_013518234 XP_013373688 MODEL 8922139 protein-coding Actr3b actin related protein 3B NW_004955491 6690246 6741900 + 102004717 AGCD01060570;AGCD01060571;GBBH01036550;GBCE01159382;XM_013504654 XP_013360108 MODEL 39131940 snrna U1 U1 spliceosomal RNA 8888443 protein-coding Gcdh glutaryl-CoA dehydrogenase ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); flavin adenine dinucleotide binding (ortholog); glutaryl-CoA dehydrogenase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); fatty acid oxidation (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH congenital dyserythropoietic anemia type IVa (ortholog); genetic disease (ortholog); glutaric acidemia I (ortholog); FOUND IN mitochondrion (ortholog) NW_004955415 31952400 31958067 + 102025456 AGCD01016704;GBDI01005012;XM_005381040 XP_005381097 MODEL 8968450 protein-coding Psme3 proteasome activator subunit 3 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); identical protein binding (ortholog); MDM2/MDM4 family protein binding (ortholog); INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 16631379 16637331 + 102023658 AGCD01043696;AGCD01043697;GBDF01008333;XM_005394477;XM_005394479 XP_005394534;XP_005394536 MODEL 39134145 misc_rna 7SK 7SK RNA 8704748 protein-coding Serpinb12 serpin family B member 12 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN cornified envelope (ortholog) NW_004955402 47338874 47361485 + 102024072 AGCD01001180;GBDI01178459;XM_005373030 XP_005373087 MODEL 8733606 protein-coding Hmcn1 hemicentin 1 INVOLVED IN actin cytoskeleton organization (ortholog); basement membrane organization (ortholog); response to bacterium (ortholog); ASSOCIATED WITH age related macular degeneration 1 (ortholog); macular degeneration (ortholog); prostate cancer (ortholog); FOUND IN basement membrane (ortholog); cell cortex (ortholog); cell junction (ortholog) NW_004955406 24229666 24623341 + 102011399 AGCD01006193;AGCD01006194;AGCD01006195;AGCD01006196;AGCD01006197;AGCD01006198;AGCD01006199;AGCD01006200;AGCD01006201;AGCD01006202;GBDJ01303573;XM_005375081;XM_013521738;XM_013521742 XP_005375138;XP_013377192;XP_013377196 MODEL 8814483 protein-coding LOC102017184 chromosome unknown open reading frame, human C10orf120 NW_004955841 7610 9412 + 102017184 AGCD01078471;GBDF01079972;XM_005415128 XP_005415185 MODEL 8849227 protein-coding Fgfr4 fibroblast growth factor receptor 4 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adult respiratory distress syndrome (ortholog); cancer (ortholog); FOUND IN cell-cell junction (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955408 29370480 29383531 + 102019778 AGCD01008753;AGCD01008754;GBCQ01129403;XM_005376410;XM_005376412;XM_005376413;XM_005376414 XP_005376467;XP_005376469;XP_005376470;XP_005376471 MODEL 8856090 protein-coding Plat plasminogen activator, tissue type ENCODES a protein that exhibits phosphoprotein binding (ortholog); serine-type endopeptidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to luteinizing hormone stimulus (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute promyelocytic leukemia (ortholog); Acute Traumatic Coagulopathy (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955536 730962 754333 + 102009758 AGCD01070737;GBCQ01003427;XM_005410511 XP_005410568 MODEL 8729417 protein-coding Kiaa0753 KIAA0753 ortholog INVOLVED IN cilium assembly (ortholog); cytosolic ciliogenesis (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); genetic disease (ortholog); Joubert Syndrome 38 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) NW_004955467 12074413 12144672 - 102006760 AGCD01051625;GBDJ01018170;XM_013522135;XM_013522136;XM_013522137;XM_013522138;XM_013522140 XP_013377589;XP_013377590;XP_013377591;XP_013377592;XP_013377594 MODEL 10303271 ncrna LOC106147072 uncharacterized LOC106147072 NW_004955515 1253399 1273984 + 106147072 AGCD01067222;AGCD01067223;XR_001231789;XR_001231790;XR_001231791 MODEL 8871431 protein-coding B3gnt8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog) NW_004955555 357726 359695 - 102018340 AGCD01073024;GBDJ01029590;XM_005412350 XP_005412407 MODEL 8938303 pseudo LOC102017941 L-lactate dehydrogenase A chain pseudogene NW_004955403 58774316 58775377 - 102017941 AGCD01003191;XR_259281 MODEL 9056084 protein-coding Relb RELB proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to osmotic stress (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atopic dermatitis (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytosol (ortholog) NW_004955555 2060533 2086229 + 102030482 AGCD01073127;AGCD01073128;AGCD01073129;GBCB01060771;GBDK01139724;XM_005412484;XM_013508745 XP_005412541;XP_013364199 MODEL 8959118 protein-coding Fam204a family with sequence similarity 204 member A NW_004955431 22920076 22947959 - 102003995 AGCD01030524;GBCB01059382;XM_005387877;XM_005387878 XP_005387934;XP_005387935 MODEL 8721050 pseudo LOC102009927 centrin-3 pseudogene NW_004955467 10028525 10029023 + 102009927 AGCD01051543 MODEL 8878409 protein-coding Best3 bestrophin 3 ENCODES a protein that exhibits chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); ligand-gated monoatomic anion channel activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); negative regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH aortic dissection (ortholog); atrial fibrillation (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 9957595 10031193 - 102026284 AGCD01004801;AGCD01004802;GBDI01011038;XM_013517529;XM_013517531 XP_013372983;XP_013372985 MODEL 9023669 protein-coding Ints15 integrator complex subunit 15 INVOLVED IN brain development (ortholog); eye development (ortholog); mRNA splicing, via spliceosome (ortholog); FOUND IN chromosome (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955460 13106906 13118531 - 102019147 AGCD01048671;GBDF01154363;XM_005397884;XM_013521245 XP_005397941;XP_013376699 MODEL 39133516 snorna U3 Small nucleolar RNA U3 8798537 protein-coding Golim4 golgi integral membrane protein 4 FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955448 17214536 17288003 - 102012816 AGCD01041717;GBCQ01069721;XM_005393143;XM_013518629 XP_005393200;XP_013374083 MODEL 8816416 ncrna LOC102005909 uncharacterized LOC102005909 NW_004955411 1623772 1628626 - 102005909 AGCD01011485;GBDF01224028;XR_001232783;XR_259911 MODEL 8766518 protein-coding LOC102019548 olfactory receptor 2G3-like NW_004955581 848998 850370 + 102019548 AGCD01075698;XM_005414255 XP_005414312 MODEL 39133883 misc_rna 7SK 7SK RNA 8888669 trna trnD(gtc) tRNA-Asp MT 6950 7017 + 15822226 9000861 pseudo LOC102010721 TRMT1-like protein pseudogene NW_004955431 1011390 1013166 - 102010721 AGCD01029888 MODEL 39132274 rrna 5S_rRNA 5S ribosomal RNA 8937415 protein-coding Ap5z1 adaptor related protein complex 5 subunit zeta 1 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); axon development (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); nuclear speck (ortholog) NW_004955460 10997554 11009435 - 102007521 AGCD01048626;GBDF01119923;XM_005397853 XP_005397910 MODEL 39131336 protein-coding TOPORS TOP1 binding arginine/serine rich protein 8925412 protein-coding LOC102006931 uncharacterized LOC102006931 NW_004955423 27013477 27045496 - 102006931 AGCD01024112;AGCD01024113;GBCB01041473;GBCB01041476;XM_013514386 XP_013369840 MODEL 8720197 protein-coding Psme3ip1 proteasome activator subunit 3 interacting protein 1 INVOLVED IN negative regulation of proteasomal protein catabolic process (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 14813688 14843446 - 102023627 AGCD01031729;AGCD01031730;GBCB01023782;XM_005388378;XM_005388379;XM_005388380;XM_005388381;XM_005388383;XM_013516131 XP_005388435;XP_005388436;XP_005388437;XP_005388438;XP_005388440;XP_013371585 MODEL 8882673 ncrna LOC102005132 uncharacterized LOC102005132 NW_004955470 10770420 10783689 - 102005132 AGCD01052876;AGCD01052877;GBDF01112853;XR_263499;XR_263500 MODEL 8706460 protein-coding Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of dendritic spine development (ortholog); positive regulation of membrane tubulation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH pulmonary tuberculosis (ortholog); systemic juvenile rheumatoid arthritis (ortholog); urinary bladder cancer (ortholog); FOUND IN cell projection membrane (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955461 4813228 5083548 - 102007744 AGCD01048875;AGCD01048876;GBDF01249602;GBDK01182284;XM_013521324 XP_013376778 MODEL 8827231 pseudo LOC102012309 RAC-gamma serine/threonine-protein kinase-like NW_004955414 21907536 21908908 - 102012309 AGCD01015437 MODEL 9051021 protein-coding Ttc12 tetratricopeptide repeat domain 12 INVOLVED IN axonemal dynein complex assembly (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); alcohol dependence (ortholog); Asthenozoospermia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955412 14945237 15011560 + 102007096 AGCD01012863;AGCD01012864;AGCD01012865;GBDF01016223;XM_005378139;XM_005378141;XM_005378142;XM_013511097 XP_005378196;XP_005378198;XP_005378199;XP_013366551 MODEL 8895758 protein-coding Hcrt hypocretin neuropeptide precursor ENCODES a protein that exhibits neuropeptide activity (ortholog); neuropeptide hormone activity (ortholog); type 1 orexin receptor binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); drinking behavior (ortholog); eating behavior (ortholog); PARTICIPATES IN orexin/hypocretin signaling pathway; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 2; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis dependence (ortholog); cocaine abuse (ortholog); FOUND IN neuronal dense core vesicle lumen (ortholog); perinuclear region of cytoplasm (ortholog); secretory granule (ortholog) NW_004955451 16235819 16237457 - 102015590 AGCD01043662;XM_005394450 XP_005394507 MODEL 9012893 pseudo LOC102024056 crooked neck-like protein 1 NW_004955443 299763 302020 - 102024056 AGCD01038096 MODEL 39132484 snrna U6 U6 spliceosomal RNA 8951046 pseudo LOC102022339 RING-box protein 2 pseudogene NW_004955563 1440099 1440434 - 102022339 AGCD01074147 MODEL 39131660 rrna 5S_rRNA 5S ribosomal RNA 9028138 protein-coding Pde1b phosphodiesterase 1B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); INVOLVED IN cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); cellular response to macrophage colony-stimulating factor stimulus (ortholog); locomotory behavior (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH cerebellar ataxia (ortholog); learning disability (ortholog); Parkinsonism (ortholog); FOUND IN cytosol (ortholog); neuronal cell body (ortholog) NW_004955458 1791090 1819261 + 102009692 AGCD01047205;GBDJ01353750;XM_005397232;XM_005397233;XM_005397234 XP_005397289;XP_005397290;XP_005397291 MODEL 8966494 protein-coding Cfap73 cilia and flagella associated protein 73 NW_004955482 9486245 9493876 + 102007997 AGCD01057573;AGCD01057574;GBBH01003993;GBBH01004004;XM_013503588;XM_013503589;XM_013503590 XP_013359042;XP_013359043;XP_013359044 MODEL 8916839 protein-coding Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); calcium-dependent ATPase activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transport (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); agenesis of the corpus callosum with peripheral neuropathy (ortholog); autosomal dominant nonsyndromic deafness (ortholog); FOUND IN apical plasma membrane (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955561 1727935 1851907 - 102019541 AGCD01073864;GBDJ01014644;XM_005413071;XM_005413077 XP_005413128;XP_005413134 MODEL 8785207 ncrna LOC102019871 uncharacterized LOC102019871 NW_004955402 27380168 27384518 - 102019871 AGCD01000700;GBDF01146724;XR_259070 MODEL 39133884 misc_rna 7SK 7SK RNA 8836916 pseudo LOC102014941 periphilin-1 pseudogene NW_004955529 167897 169591 - 102014941 AGCD01069623;XM_005410061;XM_005410062;XM_005410063 MODEL 8754851 protein-coding Akna AT-hook transcription factor INVOLVED IN delamination (ortholog); epithelial to mesenchymal transition (ortholog); neuroblast delamination (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); fibrillar center (ortholog) NW_004955419 13218060 13261289 + 102011870 AGCD01019997;AGCD01019998;AGCD01019999;GBBH01060776;GBCE01188222;XM_005382635 XP_005382692 MODEL 39134456 misc_rna 7SK 7SK RNA 9026866 protein-coding Fgfrl1 fibroblast growth factor receptor like 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); diaphragm development (ortholog); heart valve morphogenesis (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); Contracture (ortholog); COVID-19 (ortholog); FOUND IN cell-cell contact zone (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955514 499526 509208 + 102011793 AGCD01067013;GBCB01073055;XM_005408687 XP_005408744 MODEL 8727246 protein-coding Thbs3 thrombospondin 3 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN bone trabecula formation (ortholog); growth plate cartilage development (ortholog); ossification involved in bone maturation (ortholog); ASSOCIATED WITH genetic disease (ortholog); prostate cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955545 1664372 1675810 - 102003381 AGCD01071865;AGCD01071866;GBDK01058843;XM_005411591;XM_005411593;XM_005411594;XM_013508309;XM_013508310 XP_005411648;XP_005411650;XP_005411651;XP_013363763;XP_013363764 MODEL 8972605 ncrna LOC102017945 uncharacterized LOC102017945 NW_004955405 7621676 7626930 + 102017945 AGCD01004721;GBDF01304497;XR_001236107;XR_259363 MODEL 9017599 protein-coding Dnaaf5 dynein axonemal assembly factor 5 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN cilium movement (ortholog); inner dynein arm assembly (ortholog); outer dynein arm assembly (ortholog); ASSOCIATED WITH male infertility (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 18 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); motile cilium (ortholog) NW_004955460 8479274 8525828 + 102009695 AGCD01048517;AGCD01048518;AGCD01048519;AGCD01048520;GBDF01082243;XM_005397777 XP_005397834 MODEL 8783306 ncrna LOC102003405 uncharacterized LOC102003405 NW_004955452 4390516 4398593 - 102003405 AGCD01043981;GBDK01434065;XR_262649 MODEL 39131941 snrna U1 U1 spliceosomal RNA 9062278 protein-coding Capza2 capping actin protein of muscle Z-line subunit alpha 2 ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog); renal cell carcinoma (ortholog); FOUND IN brush border (ortholog); cortical cytoskeleton (ortholog); F-actin capping protein complex (ortholog) NW_004955432 22595169 22625363 + 102013441 AGCD01031263;GBDJ01075806;XM_013515922 XP_013371376 MODEL 9019659 protein-coding Fam20a FAM20A golgi associated secretory pathway pseudokinase ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); calcium ion homeostasis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 1G (ortholog); genetic disease (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955478 4182568 4236819 + 102026000 AGCD01055845;GBBH01166907;GBCE01029092;XM_005402116 XP_005402173 MODEL 8746803 protein-coding Adk adenosine kinase ENCODES a protein that exhibits adenosine kinase activity (ortholog); deoxyadenosine kinase activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); AMP salvage (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); brain infarction (ortholog); brain ischemia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 17279541 17786140 - 102003281 AGCD01034744;AGCD01034745;AGCD01034746;AGCD01034747;AGCD01034748;AGCD01034749;AGCD01034750;AGCD01034751;AGCD01034752;AGCD01034753;AGCD01034754;AGCD01034755;AGCD01034756;AGCD01034757;AGCD01034758;GBDF01159873;XM_005389928;XM_005389929;XM_013516884 XP_005389985;XP_005389986;XP_013372338 MODEL 39134146 misc_rna 7SK 7SK RNA 8873880 protein-coding Dync1i1 dynein cytoplasmic 1 intermediate chain 1 ENCODES a protein that exhibits dynein light chain binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN intracellular transport of virus (ortholog); vesicle transport along microtubule (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH peripheral nervous system disease (ortholog); FOUND IN axon cytoplasm (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955432 12383582 12657491 + 102018961 AGCD01030978;AGCD01030979;AGCD01030980;AGCD01030981;AGCD01030982;AGCD01030983;AGCD01030984;AGCD01030985;AGCD01030986;GBDF01161863;GBDI01243738;XM_013516078 XP_013371532 MODEL 8751739 protein-coding Best4 bestrophin 4 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog) NW_004955464 13434429 13439108 + 102011635 AGCD01050277;AGCD01050278;GBDI01362790;XM_005398742 XP_005398799 MODEL 8786201 protein-coding Actr5 actin related protein 5 INVOLVED IN chromatin remodeling (ortholog); double-strand break repair (ortholog); positive regulation of DNA repair (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN cytoplasm (ortholog); Ino80 complex (ortholog); nucleus (ortholog) NW_004955445 17991969 18024525 - 102009433 AGCD01039897;AGCD01039898;GBDJ01134091;XM_005392530 XP_005392587 MODEL 8863532 protein-coding Serpinb13 serpin family B member 13 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of endopeptidase activity (ortholog); negative regulation of keratinocyte apoptotic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955402 47376973 47395267 + 102024407 AGCD01001180;AGCD01001181;XM_005373031 XP_005373088 MODEL 39132486 snrna U6 U6 spliceosomal RNA 8831366 protein-coding Hcrtr1 hypocretin receptor 1 ENCODES a protein that exhibits orexin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; orexin/hypocretin signaling pathway; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); withdrawal disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 10026464 10036267 + 102010663 AGCD01044267;XM_005395029;XM_005395030;XM_013519463 XP_005395086;XP_005395087;XP_013374917 MODEL 8781685 ncrna LOC102021338 uncharacterized LOC102021338 NW_004955478 2711040 2718852 + 102021338 AGCD01055802;GBDF01209257;XR_001230835;XR_263687 MODEL 8780450 protein-coding Golm1 golgi membrane protein 1 INVOLVED IN nucleus organization (ortholog); regulation of lipid metabolic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); hepatitis (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955432 1434759 1497916 + 102025495 AGCD01030595;AGCD01030596;AGCD01030597;GBDF01081794;XM_005387922;XM_013515954;XM_013515955;XM_013515956;XM_013515957;XM_013515958;XM_013515959;XM_013515960 XP_005387979;XP_013371408;XP_013371409;XP_013371410;XP_013371411;XP_013371412;XP_013371413;XP_013371414 MODEL 9035538 protein-coding Hmcn2 hemicentin 2 FOUND IN basement membrane (ortholog); cell cortex (ortholog); cell junction (ortholog) NW_004955513 303490 434207 + 102020942 AGCD01066820;AGCD01066821;AGCD01066822;AGCD01066823;AGCD01066824;AGCD01066825;GBCB01036967;GBCB01074728;XM_013506721 XP_013362175 MODEL 8776154 protein-coding Plau plasminogen activator, urokinase ENCODES a protein that exhibits peptidase activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to fluid shear stress (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN fibrinolysis pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH otitis media; Acute Lung Injury (ortholog); adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); serine-type endopeptidase complex (ortholog) NW_004955437 17995726 18000542 - 102006955 AGCD01034771;GBBH01166562;XM_005389937 XP_005389994 MODEL 8809302 protein-coding B3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 ASSOCIATED WITH rheumatoid arthritis (ortholog) NW_004955484 9462517 9467314 + 102016919 AGCD01058415;GBDI01255314;XM_005403702 XP_005403759 MODEL 10305017 ncrna LOC106147073 uncharacterized LOC106147073 NW_004955515 2397994 2408255 - 106147073 AGCD01067249;GBCB01083854;XR_001231792 MODEL 8811398 protein-coding Apaf1 apoptotic peptidase activating factor 1 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cardiac muscle cell apoptotic process (ortholog); cell differentiation (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Brain Injuries (ortholog); brain ischemia (ortholog); colon cancer (ortholog); FOUND IN apoptosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 34619780 34693616 + 102018463 AGCD01005380;AGCD01005381;AGCD01005382;GBBH01172252;GBDF01305895;XM_013518590;XM_013518592 XP_013374044;XP_013374046 MODEL 39131418 protein-coding WASHC3 WASH complex subunit 3 8770946 protein-coding Psme4 proteasome activator subunit 4 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); visceral heterotaxy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955441 19586567 19663335 - 102004326 AGCD01037356;AGCD01037357;AGCD01037358;GBCE01134980;GBDJ01020753;XM_013517590 XP_013373044 MODEL 8716148 ncrna LOC102009929 uncharacterized LOC102009929 NW_004955468 11697494 11712294 + 102009929 AGCD01052137;GBBH01041129;XR_001236933;XR_263414;XR_263415 MODEL 8772730 protein-coding Relch RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing INVOLVED IN intracellular cholesterol transport (ortholog); FOUND IN recycling endosome (ortholog); trans-Golgi network (ortholog) NW_004955402 46114835 46226330 + 102019972 AGCD01001151;AGCD01001152;AGCD01001153;AGCD01001154;GBDK01224883;XM_005373018;XM_005373019;XM_013511190;XM_013511192;XM_013511197;XR_001232916 XP_005373075;XP_005373076;XP_013366644;XP_013366646;XP_013366651 MODEL 39133519 snorna U3 Small nucleolar RNA U3 9045305 protein-coding Gcfc2 GC-rich sequence DNA-binding factor 2 INVOLVED IN spliceosomal complex assembly (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 10174291 10202201 + 102015216 AGCD01024507;AGCD01024508;GBDF01307374;XM_005385461;XM_013514701 XP_005385518;XP_013370155 MODEL 10378174 ncrna LOC106150051 uncharacterized LOC106150051 NW_004955462 2601698 2610948 - 106150051 AGCD01049177;XR_001236617 MODEL 9010182 trna trnE(ttc) tRNA-Glu MT 14092 14160 - 15822214 8857035 protein-coding LOC102017185 arylamine N-acetyltransferase 2 NW_004955403 42278692 42286695 + 102017185 AGCD01002751;GBDF01111352;XM_005373601;XM_005373602;XM_013513576 XP_005373658;XP_005373659;XP_013369030 MODEL 8775106 ncrna LOC102010723 uncharacterized LOC102010723 NW_004955518 2285051 2292236 + 102010723 AGCD01067775;GBBH01218705;XR_264568 MODEL 39132278 rrna 5S_rRNA 5S ribosomal RNA 39131661 rrna 5S_rRNA 5S ribosomal RNA 8873755 protein-coding Kiaa0825 KIAA0825 ortholog ASSOCIATED WITH Postaxial Polydactyly (ortholog); Postaxial Polydactyly, Type A1 (ortholog); Postaxial Polydactyly, Type A10 (ortholog) NW_004955418 17818641 18203402 + 102017877 AGCD01019158;AGCD01019159;AGCD01019160;AGCD01019161;AGCD01019162;AGCD01019163;AGCD01019164;AGCD01019165;GBBH01015832;XM_005382250;XM_005382253;XM_005382254;XM_005382255;XM_005382256;XM_005382257;XM_005382258;XM_013512985 XP_005382307;XP_005382310;XP_005382311;XP_005382312;XP_005382313;XP_005382314;XP_005382315;XP_013368439 MODEL 39132488 snrna U6 U6 spliceosomal RNA 8958732 pseudo LOC102019872 thymosin beta-4 pseudogene NW_004955449 2991663 2991946 + 102019872 AGCD01041841;XM_005393421 MODEL 8874550 protein-coding Cfap74 cilia and flagella associated protein 74 ASSOCIATED WITH Primary Ciliary Dyskinesia 49 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) NW_004955486 9056836 9107572 + 102011773 AGCD01059161;AGCD01059162;GBDF01054014;XM_005404188;XM_013504226;XM_013504227;XM_013504228;XM_013504229;XM_013504230;XM_013504231;XM_013504232;XM_013504233;XM_013504234;XM_013504235;XM_013504236;XM_013504237;XM_013504238;XR_001231114;XR_001231115;XR_001231116 XP_005404245;XP_013359680;XP_013359681;XP_013359682;XP_013359683;XP_013359684;XP_013359685;XP_013359686;XP_013359687;XP_013359688;XP_013359689;XP_013359690;XP_013359691;XP_013359692 MODEL 9045988 protein-coding LOC102012311 olfactory receptor 480-like NW_004955414 23617985 23618923 - 102012311 AGCD01015506;XM_005380205 XP_005380262 MODEL 8960515 protein-coding Golm2 golgi membrane protein 2 FOUND IN Golgi apparatus (ortholog) NW_004955416 10812414 10949563 + 102008724 AGCD01017158;AGCD01017159;AGCD01017160;AGCD01017161;AGCD01017162;AGCD01017163;AGCD01017164;AGCD01017165;AGCD01017166;GBBH01033800;GBDF01125189;XM_013512605 XP_013368059 MODEL 9040015 protein-coding Asap2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955487 4994901 5133751 + 102021883 AGCD01059321;AGCD01059322;GBCE01009597;GBDF01221269;XM_013504338 XP_013359792 MODEL 39131942 snrna U1 U1 spliceosomal RNA 8829046 pseudo LOC102019549 small ubiquitin-related modifier 2 pseudogene NW_004955402 7777066 7777353 - 102019549 AGCD01000185 MODEL 9030792 protein-coding LOC102024059 CD209 antigen-like protein E NW_004955563 1520908 1536722 + 102024059 AGCD01074151;AGCD01074152;GBDJ01280070;XM_005413157;XM_013509180;XM_013509181;XM_013509182 XP_005413214;XP_013364634;XP_013364635;XP_013364636 MODEL 9032813 protein-coding LOC102003410 DNA fragmentation factor subunit alpha-like NW_004955454 12312169 12320100 + 102003410 AGCD01045408;GBDF01264302;XM_005396061 XP_005396118 MODEL 8902162 protein-coding Apba1 amyloid beta precursor protein binding family A member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); gamma-aminobutyric acid secretion (ortholog); glutamate secretion (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955434 3384978 3588771 + 102004109 AGCD01032133;AGCD01032134;AGCD01032135;AGCD01032136;GBBH01045926;XM_005388560;XM_013516352;XM_013516353 XP_005388617;XP_013371806;XP_013371807 MODEL 8888099 protein-coding Capza3 capping actin protein of muscle Z-line subunit alpha 3 INVOLVED IN actin filament organization (ortholog); cytoplasm organization (ortholog); spermatid development (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN acrosomal vesicle (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) NW_004955413 14846394 14847489 + 102012084 AGCD01014053;GBDF01006903;XM_005379041 XP_005379098 MODEL 8717228 protein-coding Psmf1 proteasome inhibitor subunit 1 ENCODES a protein that exhibits proteasome binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of proteasomal protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955596 381080 414307 + 102011068 AGCD01076517;GBDF01007515;XM_005414689 XP_005414746 MODEL 8805749 protein-coding Bet1 Bet1 golgi vesicular membrane trafficking protein INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); vesicle fusion with Golgi apparatus (ortholog); ASSOCIATED WITH congenital muscular dystrophy with rapid progression (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); Golgi cis cisterna (ortholog) NW_004955432 10762973 10774744 - 102011573 AGCD01030936;GBDF01048008;XM_005388040 XP_005388097 MODEL 9034052 protein-coding Actr6 actin related protein 6 INVOLVED IN nucleolus organization (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN nucleolus (ortholog); Swr1 complex (ortholog) NW_004955405 35942690 35962422 + 102020411 AGCD01005405;GBDF01304007;XM_005374528 XP_005374585 MODEL 39133885 misc_rna 7SK 7SK RNA 8837814 protein-coding Aknad1 AKNA domain containing 1 NW_004955435 12275079 12314424 - 102025504 AGCD01033139;GBDF01003157;XM_013516539;XM_013516540 XP_013371993;XP_013371994 MODEL 9014160 protein-coding Pde1c phosphodiesterase 1C ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); negative regulation of renin secretion into blood stream (ortholog); response to calcium ion (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 74 (ortholog); prostate cancer (ortholog); FOUND IN cilium (ortholog); lysosome (ortholog); neuronal cell body (ortholog) NW_004955410 32790720 33257760 - 102028835 AGCD01011351;AGCD01011352;AGCD01011353;AGCD01011354;AGCD01011355;AGCD01011356;AGCD01011357;AGCD01011358;AGCD01011359;GBBH01160601;GBBH01201304;XM_013510635 XP_013366089 MODEL 39132491 snrna U6 U6 spliceosomal RNA 8747724 protein-coding Plaur plasminogen activator, urokinase receptor ENCODES a protein that exhibits enzyme binding (ortholog); protein domain specific binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN epithelial cell differentiation involved in prostate gland development (ortholog); mesenchymal cell differentiation (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); autistic disorder (ortholog); Bacteremia (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); serine-type endopeptidase complex (ortholog) NW_004955555 1378505 1393395 - 102017395 AGCD01073075;AGCD01073076;AGCD01073077;GBCE01155133;GBCQ01139720;XM_013508758 XP_013364212 MODEL 8982033 protein-coding Trim42 tripartite motif containing 42 NW_004955508 4959495 4984166 - 102023058 AGCD01065897;GBDF01089541;XM_005407776 XP_005407833 MODEL 8936752 protein-coding Dnaaf6 dynein axonemal assembly factor 6 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 36 (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955490 8760382 8842392 - 102028643 AGCD01060294;AGCD01060295;AGCD01060296;AGCD01060297;GBDI01026953;XM_005404714 XP_005404771 MODEL 9011408 protein-coding Thbs4 thrombospondin 4 ENCODES a protein that exhibits calcium ion binding (ortholog); collagen binding (ortholog); fibronectin binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); endothelial cell-cell adhesion (ortholog); myoblast migration (ortholog); FOUND IN basement membrane (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) NW_004955425 21072873 21117061 - 102024029 AGCD01025781;GBBH01063682;XM_005386101 XP_005386158 MODEL 8857190 pseudo LOC102022344 uncharacterized LOC102022344 NW_004955448 10720131 10725989 + 102022344 AGCD01041500 MODEL 8891365 ncrna LOC102009931 uncharacterized LOC102009931 NW_004955469 1231307 1236093 - 102009931 AGCD01052250;XR_263423 MODEL 39134147 misc_rna 7SK 7SK RNA 8828936 protein-coding Washc4 WASH complex subunit 4 INVOLVED IN cognition (ortholog); endolysosomal toll-like receptor signaling pathway (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 43 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN BLOC-1 complex (ortholog); endosome (ortholog); nucleoplasm (ortholog) NW_004955405 39451423 39499295 + 102016230 AGCD01005500;AGCD01005501;GBDF01188550;XM_005374605 XP_005374662 MODEL 39131943 snrna U1 U1 spliceosomal RNA 8906288 ncrna LOC102006934 uncharacterized LOC102006934 NW_004955425 7579288 7588814 + 102006934 AGCD01025389;GBDF01234416;XR_261134 MODEL 8904989 protein-coding Hcrtr2 hypocretin receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); orexin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; orexin/hypocretin signaling pathway; ASSOCIATED WITH hyperglycemia (ortholog); narcolepsy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955411 970892 1010138 - 102008075 AGCD01011469;AGCD01011470;AGCD01011471;GBDF01277185;GBDF01277186;XM_013510721 XP_013366175 MODEL 8865878 protein-coding Dync1i2 dynein cytoplasmic 1 intermediate chain 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY AND STRUCTURAL BRAIN ANOMALIES (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES (ortholog); FOUND IN centrosome (ortholog); microtubule (ortholog); outer dynein arm (ortholog) NW_004955449 3204839 3256059 - 102018042 AGCD01041845;AGCD01041846;GBDJ01007532;XM_005393228;XM_005393230;XM_005393231;XM_013518773;XM_013518774 XP_005393285;XP_005393287;XP_005393288;XP_013374227;XP_013374228 MODEL 9038957 protein-coding Atp2b3 ATPase plasma membrane Ca2+ transporting 3 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); PDZ domain binding (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); neural retina development (ortholog); regulation of cytosolic calcium ion concentration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); Developmental Disabilities (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); parallel fiber (ortholog) NW_004955580 286092 332657 + 102011378 AGCD01075594;AGCD01075595;AGCD01075596;GBCB01000157;XM_013509708;XM_013509709;XM_013509710 XP_013365162;XP_013365163;XP_013365164 MODEL 8922288 ncrna LOC102014944 uncharacterized LOC102014944 NW_004955532 1468850 1474380 + 102014944 AGCD01070190;GBDF01225687;XR_264718;XR_264719 MODEL 8869333 protein-coding LOC102005144 cytidine monophosphate-N-acetylneuraminic acid hydroxylase NW_004955483 1836388 2025256 + 102005144 AGCD01057655;AGCD01057656;AGCD01057657;AGCD01057658;AGCD01057659;AGCD01057660;AGCD01057661;AGCD01057662;AGCD01057663;AGCD01057664;AGCD01057665;AGCD01057666;GBCE01108999;XM_005403351;XM_005403352;XM_005403353;XM_013503835;XM_013503836;XM_013503837 XP_005403408;XP_005403409;XP_005403410;XP_013359289;XP_013359290;XP_013359291 MODEL 39134457 misc_rna 7SK 7SK RNA 10260250 ncrna LOC106147074 uncharacterized LOC106147074 NW_004955515 407228 409282 + 106147074 AGCD01067198;GBDJ01388559;XR_001231804 MODEL 8789422 pseudo LOC102017946 cytochrome c oxidase subunit 7B, mitochondrial pseudogene NW_004955452 16315978 16316312 + 102017946 AGCD01044505 MODEL 8846397 protein-coding Ints2 integrator complex subunit 2 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955451 2822081 2876117 - 102010115 AGCD01043023;AGCD01043024;GBDJ01299082;XM_005393971 XP_005394028 MODEL 8796741 protein-coding Ttc13 tetratricopeptide repeat domain 13 NW_004955492 7683353 7743066 + 102010376 AGCD01060802;GBCE01104916;XM_005404982;XM_005404984 XP_005405039;XP_005405041 MODEL 8996279 protein-coding B3gntl1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 ENCODES a protein that exhibits tRNA-queuosine(34) galactosyltransferase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA modification (ortholog); tRNA wobble guanine modification (ortholog); FOUND IN cytoplasm (ortholog) NW_004955506 165383 272051 + 102003989 AGCD01065216;AGCD01065217;AGCD01065218;GBDF01248941;XM_005407178;XM_005407179;XM_013506005;XM_013506006 XP_005407235;XP_005407236;XP_013361459;XP_013361460 MODEL 8969955 pseudo LOC102005910 nicotinamide phosphoribosyltransferase-like NW_004955463 5062434 5074910 - 102005910 AGCD01049628;AGCD01049629 MODEL 8871078 protein-coding Bet1l Bet1 golgi vesicular membrane trafficking protein like ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN regulation of retrograde vesicle-mediated transport, Golgi to ER (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH endometrial adenocarcinoma (ortholog); uterine fibroid (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955476 11833595 11836411 + 102003233 AGCD01055475;GBDK01142903;XM_005401891;XM_013502918 XP_005401948;XP_013358372 MODEL 8886647 pseudo LOC102019873 aldose reductase-related protein 2 pseudogene NW_004955450 7501266 7502482 - 102019873 AGCD01042539 MODEL 8709267 protein-coding Capzb capping actin protein of muscle Z-line subunit beta ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); activation of protein kinase C activity (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN brush border (ortholog); cortical cytoskeleton (ortholog); dendritic spine (ortholog) NW_004955452 34454 168514 - 102011618 AGCD01043797;AGCD01043798;AGCD01043799;AGCD01043800;AGCD01043801;AGCD01043802;GBCE01000866;XM_005394657;XM_005394658 XP_005394714;XP_005394715 MODEL 8944312 protein-coding Fam20b FAM20B glycosaminoglycan xylosylkinase ENCODES a protein that exhibits phosphotransferase activity, alcohol group as acceptor (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955406 18357394 18400743 + 102027809 AGCD01006030;AGCD01006031;AGCD01006032;AGCD01006033;AGCD01006034;GBCB01022788;XM_005374941;XM_013521110;XM_013521113;XM_013521117;XM_013521118;XM_013521130 XP_005374998;XP_013376564;XP_013376567;XP_013376571;XP_013376572;XP_013376584 MODEL 8750355 protein-coding Rell1 RELT like 1 INVOLVED IN positive regulation of p38MAPK cascade (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955443 9461570 9526986 + 102009997 AGCD01038357;GBCE01152742;XM_005392010;XM_013518114 XP_005392067;XP_013373568 MODEL 8852745 protein-coding Tor1a torsin family 1 member A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent protein folding chaperone (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); ERAD pathway (ortholog); intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-5 (ortholog); autosomal dominant intellectual developmental disorder 43 (ortholog); Contracture (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955513 30655 36299 - 102012790 AGCD01066810;GBDF01083639;XM_005408331 XP_005408388 MODEL 39133521 snorna U3 Small nucleolar RNA U3 8950512 protein-coding Akr1a1 aldo-keto reductase family 1 member A1 ENCODES a protein that exhibits aldose reductase (NADPH) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); glucuronolactone reductase activity (ortholog); INVOLVED IN aldehyde catabolic process (ortholog); cellular detoxification of aldehyde (ortholog); D-glucuronate catabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; prostaglandin biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); breast cancer (ortholog); Carcinogenesis (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); synapse (ortholog) NW_004955464 12715238 12729034 - 102028510 AGCD01050220;AGCD01050221;GBCQ01009224;XM_005398702;XM_013521760 XP_005398759;XP_013377214 MODEL 10281984 ncrna LOC106150052 uncharacterized LOC106150052 NW_004955462 8680506 8687963 + 106150052 AGCD01049324;GBCE01042961;XR_001236618 MODEL 9032618 pseudo LOC102021342 60S ribosomal protein L7 pseudogene NW_004955416 31233424 31238297 + 102021342 AGCD01017729 MODEL 8781748 protein-coding Serpinb2 serpin family B member 2 PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cornified envelope (ortholog) NW_004955402 47707182 47720688 + 102026493 AGCD01001192;GBBH01024006;XM_005373036 XP_005373093 MODEL 8840939 protein-coding Gcg glucagon ENCODES a protein that exhibits gastric inhibitory polypeptide receptor binding (ortholog); glucagon receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN positive regulation of adenylate cyclase activity; adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN forkhead class A signaling pathway; glucagon signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); Alzheimer's disease (ortholog); Anorexia (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); plasma membrane (ortholog) NW_004955449 11708152 11716429 + 102018785 AGCD01042092;XM_005393317;XM_013518788 XP_005393374;XP_013374242 MODEL 8915109 protein-coding Hmg20a high mobility group 20A ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of neuron differentiation (ortholog); negative regulation of protein sumoylation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN nucleus (ortholog) NW_004955450 2285444 2362696 + 102022444 AGCD01042381;AGCD01042382;GBDF01085823;XM_005393490;XM_005393491;XM_005393492;XM_005393493;XM_013518883;XM_013518884 XP_005393547;XP_005393548;XP_005393549;XP_005393550;XP_013374337;XP_013374338 MODEL 8744166 protein-coding LOC102010724 putative inactive carboxylesterase 4 NW_004955433 13538663 13552591 - 102010724 AGCD01031695;XM_013516106 XP_013371560 MODEL 8888554 protein-coding Kiaa0930 KIAA0930 ortholog ASSOCIATED WITH COVID-19 (ortholog); Neurodevelopmental Disorders (ortholog) NW_004955413 29622818 29654493 - 102028403 AGCD01014588;GBCE01054386;GBDF01002364;XM_005379479 XP_005379536 MODEL 39131944 snrna U1 U1 spliceosomal RNA 39131542 protein-coding HCST hematopoietic cell signal transducer 8842774 protein-coding Cfap77 cilia and flagella associated protein 77 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) NW_004955513 1834654 1951827 + 102027216 AGCD01066865;GBBH01031293;XM_005408380 XP_005408437 MODEL 8737426 protein-coding Golph3 golgi phosphoprotein 3 ENCODES a protein that exhibits cargo adaptor activity (ortholog); enzyme binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN asymmetric Golgi ribbon formation (ortholog); cell adhesion molecule production (ortholog); cell migration (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); Golgi apparatus (ortholog) NW_004955426 17980514 18017041 - 102022105 AGCD01026509;GBDI01062477;XM_005386154;XM_005386155 XP_005386211;XP_005386212 MODEL 8900255 pseudo LOC102017947 sorting nexin-6 pseudogene NW_004955405 9414066 9415333 + 102017947 AGCD01004772 MODEL 8938233 protein-coding Asap3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of GTPase activity (ortholog); regulation of stress fiber assembly (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN focal adhesion (ortholog); ruffle (ortholog) NW_004955452 3437240 3480472 - 102015686 AGCD01043926;GBDI01128510;XM_005394763;XM_013519524 XP_005394820;XP_013374978 MODEL 9024105 protein-coding Plb1 phospholipase B1 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); retinyl-palmitate esterase activity (ortholog); INVOLVED IN diacylglycerol catabolic process (ortholog); phosphatidylcholine catabolic process (ortholog); phosphatidylethanolamine catabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH prostate cancer (ortholog); rheumatoid arthritis (ortholog); FOUND IN brush border membrane (ortholog) NW_004955469 10370646 10511263 + 102013161 AGCD01052532;AGCD01052533;AGCD01052534;AGCD01052535;GBBH01117765;XM_005400528;XM_005400529;XM_005400530;XM_013522646;XM_013522647;XM_013522648;XM_013522649;XM_013522650;XM_013522651;XM_013522652 XP_005400585;XP_005400586;XP_005400587;XP_013378100;XP_013378101;XP_013378102;XP_013378103;XP_013378104;XP_013378105;XP_013378106 MODEL 8811856 trna trnF(gaa) tRNA-Phe MT 1 66 + 15822237 9028430 pseudo LOC102022348 40S ribosomal protein S2 pseudogene NW_004955894 10943 11793 + 102022348 AGCD01078600 MODEL 8707404 ncrna LOC102019550 uncharacterized LOC102019550 NW_004955402 26587384 26638965 + 102019550 AGCD01000682;GBDF01306098;XR_001236745;XR_259068 MODEL 8905416 protein-coding LOC102024063 neutrophil gelatinase-associated lipocalin-like NW_004955570 492312 495847 + 102024063 AGCD01074730;XM_005413637 XP_005413694 MODEL 8710322 pseudo LOC102003411 nuclease-sensitive element-binding protein 1 pseudogene NW_004955454 11898396 11903297 + 102003411 AGCD01045401;AGCD01045402;XR_262803 MODEL 39132280 rrna 5S_rRNA 5S ribosomal RNA 8872076 protein-coding LOC102006937 olfactory receptor 5B3-like NW_004955511 3259255 3266476 - 102006937 AGCD01066452;XM_013506400 XP_013361854 MODEL 8885744 protein-coding Apba2 amyloid beta precursor protein binding family A member 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); in utero embryonic development (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH skin disease (ortholog); FOUND IN Golgi apparatus (ortholog); presynapse (ortholog); Schaffer collateral - CA1 synapse (ortholog) NW_004955416 29390601 29591815 - 102014778 AGCD01017655;AGCD01017656;AGCD01017657;GBDJ01028472;XM_005381659;XM_005381660;XM_013512683 XP_005381716;XP_005381717;XP_013368137 MODEL 8780981 protein-coding Psmg1 proteasome assembly chaperone 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); proteasome binding (ortholog); INVOLVED IN cerebellar granule cell precursor proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); proteasome core complex assembly (ortholog); ASSOCIATED WITH ulcerative colitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955407 37993657 38002986 - 102021520 AGCD01007792;GBDI01180160;XM_005375763;XM_005375764 XP_005375820;XP_005375821 MODEL 8740878 protein-coding Fgg fibrinogen gamma chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH blood coagulation disease (ortholog); brain small vessel disease (ortholog); congenital afibrinogenemia (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8786910 8794947 + 102008306 AGCD01053194;GBDF01040042;XM_005400931 XP_005400988 MODEL 8817338 ncrna LOC102012320 uncharacterized LOC102012320 NW_004955416 18878338 18879499 - 102012320 AGCD01017411;GBDF01086604;XR_260394 MODEL 8763729 ncrna LOC102014953 uncharacterized LOC102014953 NW_004955559 477612 481999 + 102014953 AGCD01073587;GBDJ01116231;XR_264995 MODEL 9027570 protein-coding Gcgr glucagon receptor ENCODES a protein that exhibits glucagon receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; glucagon signaling pathway; ASSOCIATED WITH ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); Mahvash disease (ortholog); maturity-onset diabetes of the young type 1 (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) NW_004955506 1340410 1348028 - 102027766 AGCD01065257;GBDK01432119;XM_013506127;XM_013506128;XM_013506129;XM_013506131;XM_013506132;XM_013506133;XM_013506134;XM_013506135;XM_013506136;XM_013506137 XP_013361581;XP_013361582;XP_013361583;XP_013361585;XP_013361586;XP_013361587;XP_013361588;XP_013361589;XP_013361590;XP_013361591 MODEL 8780812 protein-coding Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calmodulin binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH dystonia (ortholog); gestational diabetes (ortholog); pre-eclampsia (ortholog); FOUND IN basolateral plasma membrane (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955406 39552034 39645694 + 102013048 AGCD01006631;AGCD01006632;GBBH01025079;XM_005375268;XM_005375269;XM_005375270;XM_013522622;XM_013522634 XP_005375325;XP_005375326;XP_005375327;XP_013378076;XP_013378088 MODEL 8950332 protein-coding Pde2a phosphodiesterase 2A ENCODES a protein that exhibits 3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity (ortholog); 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); aorta development (ortholog); cAMP catabolic process (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); cardiomyopathy (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 18765591 18826717 + 102023685 AGCD01015287;GBCQ01072216;XM_013512066 XP_013367520 MODEL 39131945 snrna U1 U1 spliceosomal RNA 8716119 protein-coding Trim44 tripartite motif containing 44 INVOLVED IN negative regulation of protein K48-linked ubiquitination (ortholog); positive regulation of cytokine-mediated signaling pathway (ortholog); positive regulation of defense response to virus by host (ortholog); ASSOCIATED WITH aniridia (ortholog); Aniridia 3 (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 10580002 10690349 - 102008739 AGCD01022741;AGCD01022742;AGCD01022743;GBCB01005350;XM_005384121 XP_005384178 MODEL 8876513 protein-coding Them4 thioesterase superfamily member 4 ENCODES a protein that exhibits long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955589 517489 545779 + 102011160 AGCD01076175;GBDF01122861;XM_005414537 XP_005414594 MODEL 8960938 protein-coding Bex2 brain expressed X-linked 2 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); INVOLVED IN axon development (ortholog); axon regeneration (ortholog); negative regulation of protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955548 439061 505418 - 102023748 AGCD01072332;AGCD01072333;GBCE01172021;XM_005411981;XM_005411982;XM_005411984;XM_005411985;XM_013508531 XP_005412038;XP_005412039;XP_005412041;XP_005412042;XP_013363985 MODEL 8975418 ncrna LOC102009935 uncharacterized LOC102009935 NW_004955471 831025 838931 - 102009935 AGCD01052965;GBDF01265719;XR_263511 MODEL 8720094 pseudo LOC102017188 60S acidic ribosomal protein P0-like NW_004955404 6462391 6489586 - 102017188 AGCD01003320;AGCD01003321;AGCD01003322 MODEL 39131662 rrna 5S_rRNA 5S ribosomal RNA 39133554 snorna U3 Small nucleolar RNA U3 8752822 protein-coding Actr8 actin related protein 8 INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN Ino80 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 3851758 3867291 - 102004741 AGCD01029229;AGCD01029230;GBDJ01007143;XM_005387376;XM_013515673 XP_005387433;XP_013371127 MODEL 8783182 protein-coding Washc5 WASH complex subunit 5 INVOLVED IN endosomal transport (ortholog); lysosome organization (ortholog); meiotic spindle assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 10 (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955461 145993 199274 - 102028387 AGCD01048791;AGCD01048792;GBCB01089643;XM_005397982;XM_005397983;XM_005397985;XM_013521306;XM_013521307 XP_005398039;XP_005398040;XP_005398042;XP_013376760;XP_013376761 MODEL 9000044 protein-coding Akr1d1 aldo-keto reductase family 1 member D1 ENCODES a protein that exhibits 3-oxo-5-beta-steroid 4-dehydrogenase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); bile acid biosynthetic process (ortholog); C21-steroid hormone metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH congenital bile acid synthesis defect (ortholog); congenital bile acid synthesis defect 2 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) NW_004955494 4799706 4856100 - 102005608 AGCD01061511;AGCD01061512;GBCQ01005906;XM_005405462 XP_005405519 MODEL 8915950 protein-coding LOC102005146 olfactory receptor 13C8-like NW_004955419 21810593 21816934 - 102005146 AGCD01020283;AGCD01020284;XM_005382788 XP_005382845 MODEL 9014263 protein-coding Adm adrenomedullin ENCODES a protein that exhibits adrenomedullin receptor binding (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); androgen metabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; p38 MAPK signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acidoses (ortholog); Albuminuria (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) NW_004955414 25951473 25953593 + 102004695 AGCD01015635;GBCE01160076;XM_005380275 XP_005380332 MODEL 39134458 misc_rna 7SK 7SK RNA 9032369 protein-coding LOC102010725 early placenta insulin-like peptide NW_004955434 9375953 9378354 - 102010725 AGCD01032299;GBDJ01223750;XM_005388747 XP_005388804 MODEL 10277283 ncrna LOC106147075 uncharacterized LOC106147075 NW_004955516 3518591 3522860 + 106147075 AGCD01067494;GBCB01089270;XR_001231805;XR_001231806 MODEL 39131663 rrna 5S_rRNA 5S ribosomal RNA 39132492 snrna U6 U6 spliceosomal RNA 9030359 protein-coding Dnaaf8 dynein axonemal assembly factor 8 FOUND IN cytoplasm (ortholog); dynein axonemal particle (ortholog) NW_004955442 12738888 12752306 - 102006397 AGCD01037745;GBCE01023718;XM_005391277 XP_005391334 MODEL 9041590 protein-coding LOC102005911 gamma-aminobutyric acid receptor subunit rho-2 NW_004955411 16026663 16070295 - 102005911 AGCD01011964;GBDK01413093;XM_005377748 XP_005377805 MODEL 39134148 misc_rna 7SK 7SK RNA 8725329 protein-coding Golph3l golgi phosphoprotein 3 like ENCODES a protein that exhibits cargo adaptor activity (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN Golgi organization (ortholog); positive regulation of protein secretion (ortholog); protein targeting to Golgi apparatus (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955413 154696 183657 + 102008297 AGCD01013440;AGCD01013441;AGCD01013442;AGCD01013443;GBDF01221489;XM_005378663;XM_005378664;XM_013511413 XP_005378720;XP_005378721;XP_013366867 MODEL 8855875 protein-coding Card10 caspase recruitment domain family member 10 INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); positive regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH immunodeficiency 89 (ortholog); primary open angle glaucoma (ortholog) NW_004955413 23920929 23946109 - 102005023 AGCD01014340;GBDI01290875;GBDK01129378;XM_005379206;XM_013511650 XP_005379263;XP_013367104 MODEL 8870731 protein-coding Cfap90 cilia and flagella associated protein 90 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axoneme (ortholog); ciliary basal body (ortholog) NW_004955504 5380575 5395166 - 102024141 AGCD01064897;GBDF01044181;XM_013505891 XP_013361345 MODEL 9023783 protein-coding Serpinb5 serpin family B member 5 INVOLVED IN extracellular matrix organization (ortholog); morphogenesis of an epithelium (ortholog); prostate gland morphogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cornified envelope (ortholog) NW_004955402 47248665 47276017 + 102023762 AGCD01001178;GBBH01168613;XM_005373029;XM_013511236;XM_013511239;XM_013511244 XP_005373086;XP_013366690;XP_013366693;XP_013366698 MODEL 39133886 misc_rna 7SK 7SK RNA 8788053 protein-coding LOC102022349 collagen alpha-1(I) chain-like NW_004955451 13935187 13936367 + 102022349 AGCD01043514;GBDK01343386;XM_005394291 XP_005394348 MODEL 8803096 protein-coding LOC102019554 solute carrier family 22 member 9 NW_004955599 192839 200622 + 102019554 AGCD01076629;AGCD01076630;GBDF01226037;XM_013510037 XP_013365491 MODEL 9015115 pseudo LOC102006938 protein kinase C iota type pseudogene NW_004955430 13260783 13262484 + 102006938 AGCD01029529 MODEL 8771331 ncrna LOC102003412 uncharacterized LOC102003412 NW_004955407 34652125 34732104 - 102003412 AGCD01007724;AGCD01007725;GBDF01014151;XR_001231192;XR_259607 MODEL 8909699 protein-coding Apba3 amyloid beta precursor protein binding family A member 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); in utero embryonic development (ortholog); negative regulation of catalytic activity (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955495 5647274 5654634 - 102012873 AGCD01062017;AGCD01062018;AGCD01062019;GBCE01170764;GBDI01115253;XM_013505233 XP_013360687 MODEL 9004088 protein-coding Hdac1 histone deacetylase 1 ENCODES a protein that exhibits chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); deacetylase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); alopecia areata (ortholog); Binge Drinking (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); heterochromatin (ortholog) NW_004955452 10636366 10668873 + 102020300 AGCD01044283;AGCD01044284;AGCD01044285;AGCD01044286;GBDF01047145;XM_005395060 XP_005395117 MODEL 8855899 protein-coding Rell2 RELT like 2 ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); positive regulation of p38MAPK cascade (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog) NW_004955415 12134642 12138071 - 102005796 AGCD01016185;GBDF01165826;XM_005380727;XM_013512220;XM_013512221 XP_005380784;XP_013367674;XP_013367675 MODEL 9034808 protein-coding Fam20c FAM20C golgi associated secretory pathway kinase ENCODES a protein that exhibits calcium ion binding (ortholog); manganese ion binding (ortholog); protease binding (ortholog); INVOLVED IN biomineral tissue development (ortholog); dentinogenesis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) NW_004955460 8142325 8192044 + 102017962 AGCD01048512;AGCD01048513;GBCE01000872;GBCQ01040449;XM_005397963 XP_005398020 MODEL 10204683 ncrna LOC106150053 uncharacterized LOC106150053 NW_004955462 4487429 4569813 + 106150053 AGCD01049228;AGCD01049229;AGCD01049230;AGCD01049231;AGCD01049232;AGCD01049233;XR_001236624 MODEL 8858849 pseudo LOC102021348 prefoldin subunit 1 pseudogene NW_004955482 4817894 4819362 - 102021348 AGCD01057311 MODEL 8855044 trna trnG(tcc) tRNA-Gly MT 9396 9464 + 15822209 8880839 protein-coding Plbd1 phospholipase B domain containing 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN extracellular space (ortholog); lysosome (ortholog) NW_004955413 11266589 11326565 - 102026961 AGCD01013956;AGCD01013957;GBCE01152183;XM_013511442 XP_013366896 MODEL 8793209 protein-coding Pde3a phosphodiesterase 3A ENCODES a protein that exhibits 3',5'-cGMP-inhibited cyclic-nucleotide phosphodiesterase activity (ortholog); 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to cGMP (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); hypertension and brachydactyly syndrome (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955413 16340827 16642731 + 102013492 AGCD01014105;AGCD01014106;AGCD01014107;AGCD01014108;GBBH01170592;XM_005379045 XP_005379102 MODEL 9006122 protein-coding Trim45 tripartite motif containing 45 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN bone development (ortholog); negative regulation of inflammatory response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955435 20216685 20225061 - 102006946 AGCD01033447;GBDF01194974;XM_005389053 XP_005389110 MODEL 8917079 protein-coding LOC102024075 protein mago nashi homolog NW_004955403 475609 476239 - 102024075 AGCD01001693;XM_005373213 XP_005373270 MODEL 39132283 rrna 5S_rRNA 5S ribosomal RNA 39133556 snorna U3 Small nucleolar RNA U3 8914309 protein-coding Ints3 integrator complex subunit 3 INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955545 352170 394751 + 102019851 AGCD01071790;GBDF01007991;XM_005411440 XP_005411497 MODEL 8747759 protein-coding Ttc14 tetratricopeptide repeat domain 14 NW_004955420 9677626 9687008 + 102017666 AGCD01020761;GBCE01001619;XM_005383061 XP_005383118 MODEL 8774454 protein-coding B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 ENCODES a protein that exhibits (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity (ortholog); acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); ganglioside biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); hereditary spastic paraplegia 26 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955458 5351924 5361755 - 102008382 AGCD01047480;AGCD01047481;AGCD01047482;AGCD01047483;GBBH01001973;GBDI01009436;XM_005397405 XP_005397462 MODEL 8938369 pseudo LOC102019875 uncharacterized protein C10orf88 homolog pseudogene NW_004955599 206585 207707 + 102019875 AGCD01076630 MODEL 9021585 protein-coding Akr1e2 aldo-keto reductase family 1 member E2 ENCODES a protein that exhibits 1,5-anhydro-D-fructose reductase activity (ortholog); oxidoreductase activity (ortholog) NW_004955429 714843 731285 - 102025823 AGCD01028373;GBBH01198200;XM_005386865 XP_005386922 MODEL 8980265 ncrna LOC102022351 uncharacterized LOC102022351 NW_004955404 2603157 2612436 + 102022351 AGCD01003263;GBDK01427892;XR_001234596;XR_001234598;XR_001234599;XR_001234600;XR_001234602;XR_001234603;XR_001234604;XR_001234605;XR_001234606;XR_001234607;XR_001234608 MODEL 8973032 protein-coding Psmg2 proteasome assembly chaperone 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH proteosome-associated autoinflammatory syndrome 4 (ortholog); FOUND IN nucleus (ortholog); protein folding chaperone complex (ortholog) NW_004955402 857228 870940 - 102011162 AGCD01000035;AGCD01000036;GBBH01004200;GBCQ01042453;XM_013513426;XM_013513470 XP_013368880;XP_013368924 MODEL 9003969 protein-coding LOC102012322 galectin-5-like NW_004955481 5560268 5566976 - 102012322 AGCD01056994;AGCD01056995;GBDK01183989;XM_005402780 XP_005402837 MODEL 8794491 protein-coding Adm2 adrenomedullin 2 ENCODES a protein that exhibits hormone activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); angiogenesis (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); phlebitis (ortholog); vascular disease (ortholog); FOUND IN extracellular space (ortholog) NW_004955413 33460975 33469935 + 102028629 AGCD01014670;AGCD01014671;AGCD01014672;GBDF01106640;XM_005379567 XP_005379624 MODEL 39131664 rrna 5S_rRNA 5S ribosomal RNA 8943012 protein-coding LOC102014954 uncharacterized LOC102014954 NW_004955559 225303 300025 + 102014954 AGCD01073558;AGCD01073559;AGCD01073560;AGCD01073561;AGCD01073562;AGCD01073563;AGCD01073564;AGCD01073565;AGCD01073566;AGCD01073567;AGCD01073568;AGCD01073569;AGCD01073570;XM_013508942 XP_013364396 MODEL 8710025 ncrna LOC102017953 uncharacterized LOC102017953 NW_004955455 12326192 12375978 + 102017953 AGCD01046033;AGCD01046034;AGCD01046035;AGCD01046036;GBCB01036113;XR_262857 MODEL 8846111 protein-coding Gch1 GTP cyclohydrolase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); GTP binding (ortholog); GTP cyclohydrolase I activity (ortholog); INVOLVED IN dihydrobiopterin metabolic process (ortholog); dopamine biosynthetic process (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autosomal recessive Segawa syndrome (ortholog); BH4-deficient hyperphenylalaninemia A (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955409 8624225 8670436 + 102029271 AGCD01009423;GBDF01115282;XM_005376759 XP_005376816 MODEL 9056150 protein-coding Tor1aip1 torsin 1A interacting protein 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN nuclear membrane organization (ortholog); positive regulation of ATP-dependent activity (ortholog); protein localization to nuclear envelope (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2Y (ortholog); centronuclear myopathy (ortholog); genetic disease (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nucleus (ortholog) NW_004955406 19122906 19152458 + 102005890 AGCD01006074;AGCD01006075;GBDF01085103;XM_005374964;XM_005374965;XM_013521233;XM_013521240;XM_013521241;XM_013521247;XM_013521257 XP_005375021;XP_005375022;XP_013376687;XP_013376694;XP_013376695;XP_013376701;XP_013376711 MODEL 8748540 protein-coding Dnaaf9 dynein axonemal assembly factor 9 NW_004955415 14148462 14276908 - 102026314 AGCD01016290;AGCD01016291;AGCD01016292;AGCD01016293;AGCD01016294;GBDF01153783;XM_005380792;XM_013512268 XP_005380849;XP_013367722 MODEL 8984781 protein-coding Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); early endosome to recycling endosome transport (ortholog); microtubule-based movement (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); endocytic vesicle membrane (ortholog) NW_004955620 46535 82595 - 102016219 AGCD01077361;GBDF01045921;XM_005415011;XM_013510152 XP_005415068;XP_013365606 MODEL 8801337 protein-coding Asb1 ankyrin repeat and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN male genitalia development (ortholog); protein ubiquitination (ortholog); FOUND IN ubiquitin ligase complex (ortholog) NW_004955542 2243381 2255747 - 102015151 AGCD01071515;GBDI01256106;XM_013508013 XP_013363467 MODEL 9061457 protein-coding Atp2c1 ATPase secretory pathway Ca2+ transporting 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); calcium ion transport (ortholog); calcium-dependent cell-cell adhesion (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Hailey-Hailey disease (ortholog); FOUND IN cis-Golgi network membrane (ortholog); Golgi apparatus (ortholog); Golgi cisterna membrane (ortholog) NW_004955501 7382657 7519789 - 102010386 AGCD01064214;AGCD01064215;AGCD01064216;GBDK01089522;XM_005406844;XM_013505732;XM_013505734 XP_005406901;XP_013361186;XP_013361188 MODEL 39131946 snrna U1 U1 spliceosomal RNA 39134149 misc_rna 7SK 7SK RNA 8776301 pseudo LOC102009936 probable RNA-binding protein 46 pseudogene NW_004955414 12245219 12246350 - 102009936 AGCD01015095 MODEL 8983600 trna trnH(gtg) tRNA-His MT 11549 11617 + 15822212 8985070 protein-coding Bex3 brain expressed X-linked 3 ENCODES a protein that exhibits death receptor binding (ortholog); identical protein binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); glaucoma (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955548 526844 528406 + 102025517 AGCD01072333;GBCE01053102;XM_005411988;XM_005411989;XM_005411990;XM_005411991 XP_005412045;XP_005412046;XP_005412047;XP_005412048 MODEL 8834951 protein-coding LOC102021350 histone H3 NW_004955483 969514 970652 - 102021350 AGCD01057638;GBDF01240962;XM_013503791 XP_013359245 MODEL 8811495 protein-coding Cfap91 cilia and flagella associated protein 91 INVOLVED IN axonemal central apparatus assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 38 (ortholog); spermatogenic failure 51 (ortholog) NW_004955427 19389866 19451136 + 102021464 AGCD01027366;AGCD01027367;AGCD01027368;AGCD01027369;AGCD01027370;AGCD01027371;AGCD01027372;AGCD01027373;GBDF01084601;XM_005386455;XM_005386456;XM_013515177 XP_005386512;XP_005386513;XP_013370631 MODEL 8926776 protein-coding Fggy FGGY carbohydrate kinase domain containing INVOLVED IN carbohydrate phosphorylation (ortholog); neuron cellular homeostasis (ortholog); ASSOCIATED WITH obesity (ortholog); Weight Gain (ortholog) NW_004955464 188037 683230 - 102013064 AGCD01049928;AGCD01049929;AGCD01049930;AGCD01049931;AGCD01049932;AGCD01049933;AGCD01049934;AGCD01049935;AGCD01049936;AGCD01049937;AGCD01049938;AGCD01049939;AGCD01049940;AGCD01049941;GBBH01150983;XM_005398479;XM_005398481;XM_013521724;XM_013521725;XM_013521726;XM_013521727;XM_013521728;XM_013521729;XM_013521730;XM_013521731 XP_005398536;XP_005398538;XP_013377178;XP_013377179;XP_013377180;XP_013377181;XP_013377182;XP_013377183;XP_013377184;XP_013377185 MODEL 39134459 misc_rna 7SK 7SK RNA 8857106 protein-coding LOC102019555 uncharacterized LOC102019555 NW_004955604 471855 512915 + 102019555 AGCD01076908;AGCD01076909;AGCD01076910;AGCD01076911;AGCD01076912;AGCD01076913;AGCD01076914;AGCD01076915;AGCD01076916;AGCD01076917;AGCD01076918;AGCD01076919;XM_005414874 XP_005414931 MODEL 8824490 trna trnI tRNA-Ile MT 3680 3747 + 15822203 8786281 protein-coding Them5 thioesterase superfamily member 5 ENCODES a protein that exhibits long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN long-chain fatty-acyl-CoA metabolic process (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955589 546592 571844 + 102011490 AGCD01076175;AGCD01076176;GBDJ01020946;XM_005414538;XM_005414543;XM_005414545;XM_013509937;XM_013509938 XP_005414595;XP_005414600;XP_005414602;XP_013365391;XP_013365392 MODEL 9002610 pseudo LOC102022352 pescadillo homolog pseudogene NW_004955404 24712579 24718093 - 102022352 AGCD01003827 MODEL 9042633 protein-coding Golt1a golgi transport 1A FOUND IN endoplasmic reticulum (ortholog); Golgi cis cisterna (ortholog); nuclear envelope (ortholog) NW_004955406 40049060 40061902 - 102019242 AGCD01006652;AGCD01006653;GBDJ01371333;XM_005375289 XP_005375346 MODEL 9064193 protein-coding Hmg20b high mobility group 20B INVOLVED IN negative regulation of protein sumoylation (ortholog); positive regulation of neuron differentiation (ortholog); skeletal muscle cell differentiation (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955495 5515996 5530424 + 102003565 AGCD01062009;AGCD01062010;GBBH01191811;XM_005405867;XM_005405868;XM_005405869;XM_005405870;XM_005405871 XP_005405924;XP_005405925;XP_005405926;XP_005405927;XP_005405928 MODEL 8949434 protein-coding LOC102017190 intestinal-type alkaline phosphatase NW_004955453 3503226 3506869 - 102017190 AGCD01044662;GBCQ01177257;XM_005395380 XP_005395437 MODEL 9016103 protein-coding Actrt1 actin related protein T1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH spermatogenic failure 57 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955473 6849016 6850445 + 102016586 AGCD01054010;GBDF01120547;XM_005401271 XP_005401328 MODEL 10389251 ncrna LOC106150054 uncharacterized LOC106150054 NW_004955462 5847653 5852321 - 106150054 AGCD01049263;XR_001236625 MODEL 8951864 protein-coding Kiaa1107 KIAA1107 ortholog NW_004955423 2291192 2379556 - 102025476 AGCD01023472;GBCB01100877;XM_005385055;XM_005385056;XM_013514536;XM_013514537 XP_005385112;XP_005385113;XP_013369990;XP_013369991 MODEL 8905045 protein-coding Card11 caspase recruitment domain family member 11 ENCODES a protein that exhibits CARD domain binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); immunological synapse (ortholog) NW_004955460 12368987 12487675 + 102010560 AGCD01048657;AGCD01048658;GBBH01126313;XM_005397859;XM_005397860;XM_005397861;XM_013521265;XM_013521266;XM_013521268;XM_013521269;XM_013521270;XM_013521271 XP_005397916;XP_005397917;XP_005397918;XP_013376719;XP_013376720;XP_013376722;XP_013376723;XP_013376724;XP_013376725 MODEL 8854618 protein-coding Wasl WASP like actin nucleation promoting factor ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); dendritic spine morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin cap (ortholog); cell leading edge (ortholog); cytoplasmic vesicle (ortholog) NW_004955479 5167851 5200512 - 102015717 AGCD01056340;GBCQ01037898;XM_005402337 XP_005402394 MODEL 8855067 pseudo LOC102003415 keratinocyte-associated protein 2-like NW_004955457 11849410 11853825 + 102003415 AGCD01046988 MODEL 39132286 rrna 5S_rRNA 5S ribosomal RNA 8934066 pseudo LOC102010726 radixin pseudogene NW_004955435 6868094 6869629 - 102010726 AGCD01032938 MODEL 8719739 protein-coding LOC102005152 olfactory receptor 2A2-like NW_004955491 447741 450169 + 102005152 AGCD01060335;XM_005404725 XP_005404782 MODEL 8923969 protein-coding Atp2c2 ATPase secretory pathway Ca2+ transporting 2 ENCODES a protein that exhibits P-type calcium transporter activity (ortholog); P-type manganese transporter activity (ortholog); INVOLVED IN mammary gland epithelium development (ortholog); positive regulation of calcium ion import (ortholog); protein localization to plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955541 47803 95074 + 102013340 AGCD01071344;AGCD01071345;GBBH01000294;XM_005410958;XM_013507971 XP_005411015;XP_013363425 MODEL 10093921 pseudo LOC106147077 T-cell immunomodulatory protein-like NW_004955516 685366 686407 - 106147077 AGCD01067394;AGCD01067395 MODEL 39132493 snrna U6 U6 spliceosomal RNA 39131665 rrna 5S_rRNA 5S ribosomal RNA 8867425 protein-coding Apbb1 amyloid beta precursor protein binding family B member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN axon guidance (ortholog); DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); nicotine dependence (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955414 22121867 22137849 - 102020000 AGCD01015443;GBCQ01066769;GBDJ01011806;XM_013511828 XP_013367282 MODEL 8746595 protein-coding Hdac10 histone deacetylase 10 ENCODES a protein that exhibits deacetylase activity (ortholog); enzyme binding (ortholog); histone deacetylase activity (ortholog); INVOLVED IN homologous recombination (ortholog); macroautophagy (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); histone deacetylase complex (ortholog) NW_004955413 33272600 33277893 - 102024549 AGCD01014661;GBDJ01361594;XM_013511371;XM_013511372 XP_013366825;XP_013366826 MODEL 9061677 protein-coding Reln reelin ENCODES a protein that exhibits lipoprotein particle receptor binding (ortholog); receptor ligand activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN associative learning (ortholog); axon guidance (ortholog); brain development (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Ataxia (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955410 8424439 8863966 - 102018268 AGCD01010746;AGCD01010747;AGCD01010748;AGCD01010749;AGCD01010750;AGCD01010751;AGCD01010752;AGCD01010753;GBCE01089394;XM_005377235;XM_005377236 XP_005377292;XP_005377293 MODEL 8810943 protein-coding Gchfr GTP cyclohydrolase I feedback regulator ENCODES a protein that exhibits amino acid binding (ortholog); enzyme inhibitor activity (ortholog); GTP cyclohydrolase binding (ortholog); INVOLVED IN protein-containing complex assembly (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); intracellular protein-containing complex (ortholog) NW_004955416 7617333 7620455 + 102026106 AGCD01016995;GBDK01091172;XM_005381258 XP_005381315 MODEL 8710773 pseudo LOC102024077 olfactory receptor-like protein OLF4 NW_004955626 120729 121640 + 102024077 AGCD01077468 MODEL 39133887 misc_rna 7SK 7SK RNA 39133558 snorna U3 Small nucleolar RNA U3 8751996 protein-coding Serpinb7 serpin family B member 7 INVOLVED IN positive regulation of collagen biosynthetic process (ortholog); positive regulation of glomerular mesangial cell proliferation (ortholog); positive regulation of platelet-derived growth factor production (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); familial encephalopathy with neuroserpin inclusion bodies (ortholog); genetic disease (ortholog) NW_004955402 47599503 47649537 + 102025961 AGCD01001191;AGCD01001192;GBCC01008982;XM_005373035;XM_013511256 XP_005373092;XP_013366710 MODEL 8814304 ncrna LOC102009937 uncharacterized LOC102009937 NW_004955415 6291304 6307243 - 102009937 AGCD01016013;AGCD01016014;GBBH01127465;XR_001233263 MODEL 39134150 misc_rna 7SK 7SK RNA 8769547 protein-coding Ints4 integrator complex subunit 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955414 13934830 14053648 + 102006762 AGCD01015131;AGCD01015132;AGCD01015133;AGCD01015134;AGCD01015135;AGCD01015136;AGCD01015137;AGCD01015138;AGCD01015139;AGCD01015140;AGCD01015141;GBDF01123228;XM_005379824;XM_005379825 XP_005379881;XP_005379882 MODEL 9041982 protein-coding LOC102019876 vomeronasal type-1 receptor 2-like NW_004955604 576131 577033 - 102019876 AGCD01076925;XM_005414875 XP_005414932 MODEL 8803642 protein-coding Bfar bifunctional apoptosis regulator ENCODES a protein that exhibits caspase binding (ortholog); protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of IRE1-mediated unfolded protein response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955442 4229236 4255623 - 102016103 AGCD01037524;AGCD01037525;GBBH01140244;XM_005391133 XP_005391190 MODEL 8788822 protein-coding B4galnt2 beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group) ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of cell-cell adhesion (ortholog); protein import (ortholog); ASSOCIATED WITH Sd(a) POLYAGGLUTINATION SYNDROME (ortholog) NW_004955451 12260885 12281301 - 102028047 AGCD01043382;AGCD01043383;AGCD01043384;GBDK01078472;XM_005394221 XP_005394278 MODEL 8979412 pseudo LOC102017959 olfactory receptor 6C3-like NW_004955458 2571769 2572702 + 102017959 AGCD01047237 MODEL 8719386 pseudo LOC102014955 protein SET-like NW_004955444 17766981 17772556 + 102014955 AGCD01039223 MODEL 9048593 protein-coding Cfap92 cilia and flagella associated protein 92 (putative) NW_004955450 10532347 10593351 + 102013781 AGCD01042625;AGCD01042626;AGCD01042627;GBDJ01020449;XM_013518909;XM_013518910;XM_013518911;XM_013518912;XM_013518913;XM_013518914;XM_013518915 XP_013374363;XP_013374364;XP_013374365;XP_013374366;XP_013374367;XP_013374368;XP_013374369 MODEL 8731640 protein-coding Psmg3 proteasome assembly chaperone 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955460 9186205 9187942 - 102020889 AGCD01048541;GBDF01159629;XM_005397814;XM_013521205;XM_013521206 XP_005397871;XP_013376659;XP_013376660 MODEL 9040633 protein-coding Pde3b phosphodiesterase 3B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); INVOLVED IN endocrine pancreas development (ortholog); glucose homeostasis (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); guanyl-nucleotide exchange factor complex (ortholog) NW_004955414 29783999 29911329 + 102024216 AGCD01015716;AGCD01015717;GBBH01229313;GBCQ01150747;XM_005380333 XP_005380390 MODEL 8913958 protein-coding Fam210a family with sequence similarity 210 member A ASSOCIATED WITH Bone Fractures (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955402 344191 367851 + 102006183 AGCD01000017;GBDF01003400;XM_005372546;XM_005372547;XM_005372548 XP_005372603;XP_005372604;XP_005372605 MODEL 8778609 protein-coding Fgl1 fibrinogen like 1 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cholesterol metabolic process (ortholog); hepatocyte proliferation (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955552 1784046 1813935 + 102022233 AGCD01072787;AGCD01072788;GBDF01111290;XM_005412199 XP_005412256 MODEL 8750824 protein-coding Trim46 tripartite motif containing 46 INVOLVED IN anterograde synaptic vesicle transport (ortholog); axonogenesis (ortholog); microtubule bundle formation (ortholog); FOUND IN axon initial segment (ortholog); main axon (ortholog); proximal neuron projection (ortholog) NW_004955545 1646244 1656825 + 102028020 AGCD01071864;GBDF01295696;XM_005411579;XM_005411581;XM_005411582;XM_005411583;XM_005411584 XP_005411636;XP_005411638;XP_005411639;XP_005411640;XP_005411641 MODEL 8952634 pseudo LOC102006941 eukaryotic translation initiation factor 5A-2 pseudogene NW_004955433 470536 470996 - 102006941 AGCD01031323 MODEL 8857676 protein-coding Dnah1 dynein axonemal heavy chain 1 INVOLVED IN cilium movement involved in cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); Kartagener syndrome (ortholog); oligospermia (ortholog); FOUND IN axoneme (ortholog); inner dynein arm (ortholog); sperm flagellum (ortholog) NW_004955430 2323928 2391470 + 102015430 AGCD01029164;AGCD01029165;GBDF01087600;XM_005387314;XM_013515571 XP_005387371;XP_013371025 MODEL 8867970 protein-coding Tor1b torsin family 1 member B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); nuclear membrane organization (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955513 23118 29401 + 102012462 AGCD01066810;GBDJ01227651;XM_005408330 XP_005408387 MODEL 8749915 protein-coding Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); centrosome localization (ortholog); microtubule cytoskeleton organization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Weight Gain (ortholog); FOUND IN centrosome (ortholog); kinetochore (ortholog); late endosome (ortholog) NW_004955433 23262981 23286506 - 102022530 AGCD01031956;GBDF01090277;XM_005388471;XM_013516193;XM_013516194 XP_005388528;XP_013371647;XP_013371648 MODEL 8846512 protein-coding Hmga1 high mobility group AT-hook 1 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autophagy (ortholog); B cell differentiation (ortholog); base-excision repair (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH hyperglycemia (ortholog); Insulin Resistance (ortholog); leiomyosarcoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear membrane (ortholog) NW_004955437 2478414 2486809 + 102014603 AGCD01034270;AGCD01034271;GBDI01001510;XM_013517084;XM_013517085;XM_013517086 XP_013372538;XP_013372539;XP_013372540 MODEL 8716564 ncrna LOC102005912 uncharacterized LOC102005912 NW_004955412 3097642 3103353 - 102005912 AGCD01012565;GBDF01016512;XR_001232865;XR_001232866;XR_001232867 MODEL 8879203 protein-coding Ttc16 tetratricopeptide repeat domain 16 ASSOCIATED WITH primary ovarian insufficiency (ortholog) NW_004955419 926561 940368 - 102028539 AGCD01019623;AGCD01019624;GBCE01008925;XM_005382418;XM_013513206;XM_013513208;XM_013513209;XM_013513210;XM_013513211;XM_013513212 XP_005382475;XP_013368660;XP_013368662;XP_013368663;XP_013368664;XP_013368665;XP_013368666 MODEL 8879320 ncrna LOC102003417 uncharacterized LOC102003417 NW_004955409 3940674 3968535 + 102003417 AGCD01009268;AGCD01009269;GBDF01016673;XR_259752 MODEL 8808046 protein-coding Akr7a2 aldo-keto reductase family 7 member A2 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); phenanthrene-9,10-epoxide hydrolase activity (ortholog); INVOLVED IN daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); pancreatic ductal adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) NW_004955452 6844 13868 - 102009010 AGCD01043795;AGCD01043796;GBBH01000796;GBCE01006855;XM_013519552 XP_013375006 MODEL 39132288 rrna 5S_rRNA 5S ribosomal RNA 39134460 misc_rna 7SK 7SK RNA 9028107 protein-coding Kiaa1143 KIAA1143 ortholog FOUND IN intercellular bridge (ortholog); nucleoplasm (ortholog) NW_004955420 26827888 26831967 + 102007775 AGCD01021433;GBDF01187457;GBDF01187461;XM_005383472 XP_005383529 MODEL 8971025 ncrna LOC102019556 uncharacterized LOC102019556 NW_004955403 15853903 15937454 - 102019556 AGCD01002055;AGCD01002056;GBDF01108949;XR_259174 MODEL 8929280 protein-coding LOC102010731 gap junction epsilon-1 protein NW_004955436 18085611 18087433 - 102010731 AGCD01033955;XM_005389256 XP_005389313 MODEL 9012098 protein-coding Adnp activity dependent neuroprotector homeobox ENCODES a protein that exhibits beta-catenin binding (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cGMP metabolic process (ortholog); estrous cycle (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); extracellular space (ortholog) NW_004955445 7498223 7530828 + 102022978 AGCD01039543;GBBH01187236;GBCE01134997;XM_005392308 XP_005392365 MODEL 39132495 snrna U6 U6 spliceosomal RNA 9060940 protein-coding Plbd2 phospholipase B domain containing 2 FOUND IN lysosome (ortholog) NW_004955482 9630300 9643212 + 102017339 AGCD01057577;GBBH01031135;GBDK01000319;XM_013503595 XP_013359049 MODEL 8917601 protein-coding Them6 thioesterase superfamily member 6 NW_004955454 1433644 1438156 + 102020081 AGCD01044969;GBCB01002054;XM_005395736 XP_005395793 MODEL 39131947 snrna U1 U1 spliceosomal RNA 8755422 protein-coding Asb10 ankyrin repeat and SOCS box containing 10 ASSOCIATED WITH Glaucoma 1, Open Angle, F (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955491 5597623 5609086 - 102005480 AGCD01060492;GBDI01055864;XM_005404820;XM_005404821 XP_005404877;XP_005404878 MODEL 8811386 pseudo LOC102017192 60S ribosomal protein L5 pseudogene NW_004955406 29987004 29987892 - 102017192 AGCD01006355 MODEL 8734819 protein-coding Pde4a phosphodiesterase 4A ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); cAMP binding (ortholog); cyclic-nucleotide phosphodiesterase activity (ortholog); INVOLVED IN cAMP catabolic process (ortholog); cellular response to xenobiotic stimulus (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); brucellosis (ortholog); Experimental Seizures (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extrinsic component of membrane (ortholog) NW_004955495 1659499 1693609 + 102004614 AGCD01061709;AGCD01061710;AGCD01061711;GBDF01002208;XM_005405595;XM_005405596;XM_013505161 XP_005405652;XP_005405653;XP_013360615 MODEL 8874215 protein-coding Actrt2 actin related protein T2 ASSOCIATED WITH Keloid (ortholog) NW_004955486 8465523 8466841 - 102030637 AGCD01059151;GBDF01008181;XM_005404155 XP_005404212 MODEL 8781200 ncrna LOC102005154 uncharacterized LOC102005154 NW_004955493 5108829 5118871 - 102005154 AGCD01061059;GBDF01187998;XR_264083 MODEL 8945454 protein-coding Wbp1 WW domain binding protein 1 ENCODES a protein that exhibits WW domain binding (ortholog) NW_004955424 11321393 11323651 - 102027420 AGCD01024562;GBCB01039025;XM_005385504;XM_005385505 XP_005385561;XP_005385562 MODEL 8944498 ncrna LOC102006949 uncharacterized LOC102006949 NW_004955528 1918029 1919886 + 102006949 AGCD01069576;GBCQ01125233;XR_264700 MODEL 8823120 trna trnK(ttt) tRNA-Lys MT 7704 7770 + 15822206 9057371 protein-coding Card14 caspase recruitment domain family member 14 ENCODES a protein that exhibits CARD domain binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); Familial Pityriasis Rubra Pilaris (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955506 2711061 2744555 - 102019189 AGCD01065301;GBCE01013164;XM_013505979;XM_013505980;XM_013505981;XM_013505982;XM_013505983;XM_013505984;XM_013505985;XM_013505986;XM_013505987;XM_013505988 XP_013361433;XP_013361434;XP_013361435;XP_013361436;XP_013361437;XP_013361438;XP_013361439;XP_013361440;XP_013361441;XP_013361442 MODEL 8768272 ncrna LOC102005913 uncharacterized LOC102005913 NW_004955465 7025399 7028146 - 102005913 AGCD01050450;GBCQ01175139;XR_001236763;XR_263247 MODEL 9010605 protein-coding Atp4a ATPase H+/K+ transporting subunit alpha ENCODES a protein that exhibits magnesium ion binding (ortholog); P-type potassium:proton transporter activity (ortholog); potassium ion binding (ortholog); INVOLVED IN pH reduction (ortholog); potassium ion transmembrane transport (ortholog); regulation of proton transport (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; esomeprazole pharmacokinetics pathway; ASSOCIATED WITH stomach cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955468 4778327 4844498 - 102023458 AGCD01051922;GBDF01080855;XM_013522382;XM_013522383 XP_013377836;XP_013377837 MODEL 8754987 protein-coding Golt1b golgi transport 1B INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN endoplasmic reticulum (ortholog); protein-containing complex (ortholog) NW_004955413 17150261 17164108 + 102017757 AGCD01014130;GBCQ01176080;XM_005379060 XP_005379117 MODEL 8759902 ncrna LOC102017963 uncharacterized LOC102017963 NW_004955463 4854737 4856857 - 102017963 AGCD01049619;GBCQ01156510;XR_263147 MODEL 8769778 protein-coding LOC102014956 vomeronasal type-1 receptor 4-like NW_004955569 902097 903053 + 102014956 AGCD01074624;XM_005413513 XP_005413570 MODEL 8751688 protein-coding Kiaa1191 KIAA1191 ortholog FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955408 28631523 28645882 - 102008702 AGCD01008721;GBDJ01006796;XM_005376368;XM_005376369;XM_005376370;XM_013509541;XM_013509546 XP_005376425;XP_005376426;XP_005376427;XP_013364995;XP_013365000 MODEL 8881211 protein-coding Apbb1ip amyloid beta precursor protein binding family B member 1 interacting protein INVOLVED IN positive regulation of cell adhesion (ortholog); T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); GABA-ergic synapse (ortholog); plasma membrane (ortholog) NW_004955429 2874783 2973321 - 102009407 AGCD01028444;AGCD01028445;AGCD01028446;GBCE01163226;GBDI01006228;XM_013515446 XP_013370900 MODEL 8709063 protein-coding Hdac11 histone deacetylase 11 ENCODES a protein that exhibits histone deacetylase activity, hydrolytic mechanism (ortholog); INVOLVED IN oligodendrocyte development (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955429 12890939 12907749 - 102005736 AGCD01028733;GBBH01209100;XM_005386979;XM_005386981 XP_005387036;XP_005387038 MODEL 8973463 ncrna LOC102021351 uncharacterized LOC102021351 NW_004955485 4631152 4633682 - 102021351 AGCD01058572;GBDF01010932;XR_263905 MODEL 10338047 pseudo LOC106150055 septin-2 pseudogene NW_004955463 230221 230867 - 106150055 AGCD01049478 MODEL 8987086 protein-coding Relt RELT TNF receptor INVOLVED IN amelogenesis (ortholog); apoptotic process (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 3C (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) NW_004955414 18074487 18104972 - 102016465 AGCD01015268;AGCD01015269;AGCD01015270;GBDK01307406;XM_005379952;XM_005379953;XM_005379954;XM_013511811 XP_005380009;XP_005380010;XP_005380011;XP_013367265 MODEL 8802969 protein-coding Fam210b family with sequence similarity 210 member B INVOLVED IN cellular response to estradiol stimulus (ortholog); erythrocyte differentiation (ortholog); inflammatory response (ortholog); ASSOCIATED WITH systemic lupus erythematosus (ortholog); FOUND IN membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955445 2854077 2862259 - 102011919 AGCD01039369;GBDJ01189877;XM_005392277 XP_005392334 MODEL 9044765 protein-coding Gck glucokinase ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); D-glucose binding (ortholog); INVOLVED IN calcium ion import (ortholog); carbohydrate phosphorylation (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; forkhead class A signaling pathway; galactokinase deficiency pathway; ASSOCIATED WITH Bone Marrow Failure Syndrome 2 (ortholog); Congenital Hyperinsulinism (ortholog); coronary artery disease (ortholog); FOUND IN actin filament (ortholog); basal cortex (ortholog); cell cortex (ortholog) NW_004955456 7784269 7838260 + 102021313 AGCD01046432;AGCD01046433;AGCD01046434;AGCD01046435;GBDI01283119;XM_013520657 XP_013376111 MODEL 39133561 snorna U3 Small nucleolar RNA U3 8844984 protein-coding LOC102012324 olfactory receptor 14I1-like NW_004955418 30244034 30244983 + 102012324 AGCD01019507;XM_013512881 XP_013368335 MODEL 39134151 misc_rna 7SK 7SK RNA 8704858 protein-coding Serpinb8 serpin family B member 8 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN epithelial cell-cell adhesion (ortholog); negative regulation of endopeptidase activity (ortholog); ASSOCIATED WITH peeling skin syndrome (ortholog); peeling skin syndrome 5 (ortholog); psoriasis (ortholog); FOUND IN cytosol (ortholog) NW_004955402 47761900 47781281 + 102026819 AGCD01001193;GBDJ01355314;XM_005373037;XM_005373038;XM_005373039;XM_013511271 XP_005373094;XP_005373095;XP_005373096;XP_013366725 MODEL 8716160 protein-coding Trim47 tripartite motif containing 47 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955506 6379088 6383671 + 102010607 AGCD01065416;GBDK01285018;XM_005407473 XP_005407530 MODEL 9051283 protein-coding Dnah10 dynein axonemal heavy chain 10 ASSOCIATED WITH Asthenozoospermia (ortholog); atrial fibrillation (ortholog); genetic disease (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955482 5206653 5308437 - 102013609 AGCD01057323;AGCD01057324;AGCD01057325;GBDF01089181;XM_013503540;XM_013503541;XM_013503542;XM_013503543 XP_013358994;XP_013358995;XP_013358996;XP_013358997 MODEL 8768678 protein-coding Ints5 integrator complex subunit 5 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) NW_004955599 551989 556341 + 102021504 AGCD01076659;GBDJ01144296;XM_005414805 XP_005414862 MODEL 8986693 pseudo LOC102003418 neuroplastin pseudogene NW_004955409 8959472 8960507 + 102003418 AGCD01009426 MODEL 8810905 ncrna LOC102022353 uncharacterized LOC102022353 NW_004955453 10850833 10853572 - 102022353 AGCD01044791;GBDF01234833;XR_001236148;XR_262727 MODEL 8704965 protein-coding Cfap95 cilia and flagella associated protein 95 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) NW_004955434 3193250 3267992 - 102030467 AGCD01032129;AGCD01032130;GBDI01245825;XM_005388557;XR_001234830;XR_001234831 XP_005388614 MODEL 8969023 pseudo LOC102024080 protein SGT1 homolog NW_004955403 2839891 2841159 + 102024080 AGCD01001739 MODEL 8896121 protein-coding B4galnt3 beta-1,4-N-acetyl-galactosaminyltransferase 3 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955454 6583405 6603715 - 102028158 AGCD01045250;AGCD01045251;AGCD01045252;GBBH01011317;GBDK01183447;XM_013520228 XP_013375682 MODEL 8924806 protein-coding Adnp2 ADNP homeobox 2 INVOLVED IN nervous system development (ortholog) NW_004955402 63312588 63346307 + 102029344 AGCD01001669;AGCD01001670;GBDF01156162;XM_005373126;XM_005373127 XP_005373183;XP_005373184 MODEL 39133888 misc_rna 7SK 7SK RNA 9018792 protein-coding Ints6 integrator complex subunit 6 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN protein localization to chromatin (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955431 4728011 4810236 - 102013324 AGCD01030007;AGCD01030008;AGCD01030009;AGCD01030010;AGCD01030011;GBBH01107233;GBCQ01151782;XM_013515760 XP_013371214 MODEL 8736728 protein-coding LOC102009952 uncharacterized LOC102009952 NW_004955420 29396157 29403592 - 102009952 AGCD01021499;AGCD01021500;GBCE01185548;XM_013513408;XR_001233705;XR_001233706;XR_001233707;XR_260774;XR_260775 XP_013368862 MODEL 10207227 ncrna LOC106147078 uncharacterized LOC106147078 NW_004955408 33677059 33867164 + 106147078 AGCD01008879;AGCD01008880;AGCD01008881;AGCD01008882;AGCD01008883;AGCD01008884;AGCD01008885;AGCD01008886;AGCD01008887;GBDF01238133;XR_001231808 MODEL 8901122 protein-coding Tor2a torsin family 2 member A ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); positive regulation of calcium ion transmembrane transport (ortholog); vasopressin secretion (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) NW_004955419 922901 926624 + 102029295 AGCD01019623;GBDF01251618;XM_005382421 XP_005382478 MODEL 10134918 ncrna LOC106150056 uncharacterized LOC106150056 NW_004955406 21861759 21862914 - 106150056 AGCD01006148;GBDJ01302264;XR_001236628 MODEL 8771927 ncrna LOC102019877 uncharacterized LOC102019877 NW_004955403 15987649 15998377 + 102019877 AGCD01002056;GBDF01075082;XR_259176 MODEL 8954796 protein-coding Pde4b phosphodiesterase 4B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); calcium channel regulator activity (ortholog); cAMP binding (ortholog); INVOLVED IN cellular response to epinephrine stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cell periphery (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955423 24464503 24906409 - 102021568 AGCD01024036;AGCD01024037;AGCD01024038;AGCD01024039;AGCD01024040;AGCD01024041;AGCD01024042;AGCD01024043;AGCD01024044;AGCD01024045;AGCD01024046;GBCB01058791;XM_005385294;XM_005385295;XM_005385297;XM_005385298 XP_005385351;XP_005385352;XP_005385354;XP_005385355 MODEL 39131666 rrna 5S_rRNA 5S ribosomal RNA 8836264 pseudo LOC102012334 60S ribosomal protein L21 pseudogene NW_004955422 13359228 13359730 + 102012334 AGCD01022822;XM_005384951 MODEL 39132290 rrna 5S_rRNA 5S ribosomal RNA 39134461 misc_rna 7SK 7SK RNA 8753734 protein-coding Ttc17 tetratricopeptide repeat domain 17 INVOLVED IN actin filament polymerization (ortholog); cilium organization (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955422 4019755 4119522 - 102026014 AGCD01022532;AGCD01022533;GBBH01188438;XM_005384085;XM_005384087;XM_013514117;XM_013514118;XM_013514119;XM_013514120;XM_013514121;XM_013514122 XP_005384142;XP_005384144;XP_013369571;XP_013369572;XP_013369573;XP_013369574;XP_013369575;XP_013369576 MODEL 8717665 protein-coding Wbp11 WW domain binding protein 11 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); WW domain binding (ortholog); INVOLVED IN RNA splicing (ortholog); ASSOCIATED WITH genetic disease (ortholog); VERTEBRAL, CARDIAC, TRACHEOESOPHAGEAL, RENAL, AND LIMB DEFECTS (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955413 11533303 11549067 - 102028846 AGCD01013964;GBCQ01067517;XM_005379004;XM_005379005;XM_013511645 XP_005379061;XP_005379062;XP_013367099 MODEL 9004575 ncrna LOC102010733 uncharacterized LOC102010733 NW_004955437 20621891 20626279 + 102010733 AGCD01034877;GBCB01027078;XR_261898 MODEL 8990541 protein-coding Akt1 AKT serine/threonine kinase 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic mitochondrial changes (ortholog); behavioral response to pain (ortholog); PARTICIPATES IN adenosine signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; ceramide signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute promyelocytic leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955538 3208711 3224386 - 102027569 AGCD01071153;GBBH01032910;GBDJ01137252;XM_005410844 XP_005410901 MODEL 8717850 protein-coding Fgl2 fibrinogen like 2 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of dendritic cell antigen processing and presentation (ortholog); negative regulation of macrophage antigen processing and presentation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autoimmune glomerulonephritis (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog) NW_004955410 7899263 7903499 + 102010979 AGCD01010726;GBCE01075859;GBDF01281505;XM_005377557 XP_005377614 MODEL 8844986 protein-coding Psmg4 proteasome assembly chaperone 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955465 10007136 10014921 - 102014653 AGCD01050498;GBBH01140190;GBCE01097527;XM_005398894 XP_005398951 MODEL 8938013 protein-coding Atp4b ATPase H+/K+ transporting subunit beta ENCODES a protein that exhibits heterocyclic compound binding (ortholog); INVOLVED IN pH reduction (ortholog); potassium ion transmembrane transport (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; esomeprazole pharmacokinetics pathway; ASSOCIATED WITH atrophic gastritis (ortholog); autoimmune gastritis (ortholog); Experimental Diabetes Mellitus (ortholog) NW_004955404 362410 372077 + 102030030 AGCD01003199;GBDK01001430;XM_005373937 XP_005373994 MODEL 39131989 snrna U1 U1 spliceosomal RNA 8898897 pseudo LOC102003422 40S ribosomal protein S6 pseudogene NW_004955411 36312248 36313022 - 102003422 AGCD01012470 MODEL 8732395 protein-coding Plcb1 phospholipase C beta 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); cellular response to fluoride (ortholog); cellular response to glyceraldehyde (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); GABA-ergic synapse (ortholog) NW_004955415 18210608 18915099 + 102020797 AGCD01016445;AGCD01016446;AGCD01016447;AGCD01016448;AGCD01016449;AGCD01016450;AGCD01016451;AGCD01016452;AGCD01016453;AGCD01016454;AGCD01016455;AGCD01016456;AGCD01016457;AGCD01016458;AGCD01016459;AGCD01016460;GBCB01041065;GBDI01190271;XM_005380862 XP_005380919 MODEL 8933251 protein-coding Kiaa1210 KIAA1210 ortholog FOUND IN acrosomal vesicle (ortholog); basal ectoplasmic specialization (ortholog) NW_004955534 815636 873969 + 102013758 AGCD01070472;AGCD01070473;AGCD01070474;AGCD01070475;AGCD01070476;GBDF01154450;XM_005410451;XM_013507699;XM_013507700 XP_005410508;XP_013363153;XP_013363154 MODEL 8865865 pseudo LOC102017195 thioredoxin pseudogene NW_004955407 36693641 36693876 - 102017195 AGCD01007774 MODEL 8741690 protein-coding Asb11 ankyrin repeat and SOCS box containing 11 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); endoplasmic reticulum (ortholog) NW_004955519 2875287 2896122 + 102018015 AGCD01067944;AGCD01067945;GBDI01323080;XM_005409172;XM_005409173;XM_005409175 XP_005409229;XP_005409230;XP_005409232 MODEL 9015188 protein-coding LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ENCODES a protein that exhibits cholesterol monooxygenase (side-chain-cleaving) activity (ortholog); heme binding (ortholog); INVOLVED IN C21-steroid hormone biosynthetic process (ortholog); cellular response to antibiotic (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); Adrenal Insufficiency (ortholog); autism spectrum disorder (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955450 3433310 3484462 + 102014960 AGCD01042434;AGCD01042435;AGCD01042436;GBCE01122700;XM_005393559;XM_013519017;XM_013519018 XP_005393616;XP_013374471;XP_013374472 MODEL 9003015 protein-coding Apbb2 amyloid beta precursor protein binding family B member 2 INVOLVED IN axon guidance (ortholog); extracellular matrix organization (ortholog); maintenance of lens transparency (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cognitive disorder (ortholog); Weight Gain (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955443 6513762 6786247 + 102013223 AGCD01038261;AGCD01038262;AGCD01038263;GBCQ01034557;XM_005391938;XM_005391948;XM_013518039;XM_013518040;XM_013518041;XM_013518042;XM_013518043;XM_013518044;XM_013518045;XM_013518046;XM_013518047;XM_013518048;XM_013518049;XM_013518050 XP_005391995;XP_005392005;XP_013373493;XP_013373494;XP_013373495;XP_013373496;XP_013373497;XP_013373498;XP_013373499;XP_013373500;XP_013373501;XP_013373502;XP_013373503;XP_013373504 MODEL 9029927 protein-coding Actrt3 actin related protein T3 FOUND IN male germ cell nucleus (ortholog) NW_004955420 28183 30207 - 102012326 AGCD01020530;GBCQ01187131;XM_005382947 XP_005383004 MODEL 8999362 ncrna LOC102005155 uncharacterized LOC102005155 NW_004955494 4421919 4432652 + 102005155 AGCD01061498;GBDF01157914;XR_001231313;XR_264112;XR_264113 MODEL 8848861 ncrna LOC102006956 uncharacterized LOC102006956 NW_004955438 989747 1006079 + 102006956 AGCD01034966;AGCD01034967;AGCD01034968;GBDF01002597;XR_001235135;XR_261908;XR_261909 MODEL 8916884 protein-coding LOC102019558 myomesin-3-like NW_004956379 652 3958 + 102019558 AGCD01079511;GBCQ01120105;GBDK01103330;XM_005415199 XP_005415256 MODEL 8715244 trna trnL1(tag) tRNA-Leu MT 11681 11750 + 15822232 8790397 pseudo LOC102005914 shugoshin-like 1 pseudogene NW_004955465 13332971 13334196 - 102005914 AGCD01050600 MODEL 8967801 protein-coding Card19 caspase recruitment domain family member 19 INVOLVED IN obsolete positive regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); protein catabolic process (ortholog); FOUND IN mitochondrion (ortholog) NW_004955515 4910621 4923815 - 102025036 AGCD01067332;AGCD01067333;GBCQ01122105;XM_005408899;XM_013506882 XP_005408956;XP_013362336 MODEL 8790255 protein-coding Tor3a torsin family 3 member A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955406 18408095 18422098 + 102028377 AGCD01006034;AGCD01006035;GBCB01056537;XM_005374944;XM_013521135 XP_005375001;XP_013376589 MODEL 8955256 protein-coding LOC102012336 guanylate-binding protein 4-like NW_004955423 4956079 4970449 + 102012336 AGCD01023550;GBDK01006373;XM_013514414;XM_013514415 XP_013369868;XP_013369869 MODEL 8957601 pseudo LOC102024082 ATP-dependent RNA helicase DDX18 pseudogene NW_004955405 18903983 18905723 - 102024082 AGCD01005029 MODEL 8904727 protein-coding LOC102021360 heat shock transcription factor, Y-linked-like NW_004955494 8274458 8275841 - 102021360 AGCD01061582;GBDF01086027;XM_005405513 XP_005405570 MODEL 8882482 protein-coding Hdac2 histone deacetylase 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); deacetylase activity (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cardiac muscle cell development (ortholog); cardiac muscle hypertrophy (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955526 2739099 2759640 + 102005296 AGCD01069313;GBCB01025957;XM_005409764 XP_005409821 MODEL 9004629 protein-coding Dync2h1 dynein cytoplasmic 2 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); coronary vasculature development (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); cytoplasmic dynein complex (ortholog) NW_004955412 6267726 6518888 + 102013071 AGCD01012671;AGCD01012672;AGCD01012673;AGCD01012674;AGCD01012675;GBCE01156315;GBCE01171445;XM_013511077 XP_013366531 MODEL 39132956 snrna U1 U1 spliceosomal RNA 8784605 protein-coding Rem1 RRAD and GEM like GTPase 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); regulation of skeletal muscle contraction by calcium ion signaling (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN I band (ortholog); T-tubule (ortholog) NW_004955422 29434477 29443172 - 102021886 AGCD01023394;GBDK01342980;XM_005384913 XP_005384970 MODEL 8885985 protein-coding Ints6l integrator complex subunit 6 like ASSOCIATED WITH Moebius syndrome (ortholog); FOUND IN centrosome (ortholog) NW_004955489 9192428 9224445 - 102024241 AGCD01060031;GBBH01051174;XM_013504487;XM_013504488;XM_013504489 XP_013359941;XP_013359942;XP_013359943 MODEL 39134152 misc_rna 7SK 7SK RNA 8961551 protein-coding Ado 2-aminoethanethiol dioxygenase ENCODES a protein that exhibits cysteamine dioxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); PARTICIPATES IN taurine and hypotaurine metabolic pathway; FOUND IN mitochondrion (ortholog) NW_004955425 16049194 16052275 + 102022832 AGCD01025594;GBBH01005931;XM_005385953 XP_005386010 MODEL 10367736 pseudo LOC106147079 high mobility group protein B1-like NW_004955516 4767150 4767759 + 106147079 AGCD01067536 MODEL 39132496 snrna U6 U6 spliceosomal RNA 8970101 protein-coding Serpinc1 serpin family C member 1 ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); lactation (ortholog); response to nutrient (ortholog); PARTICIPATES IN coagulation cascade pathway; enoxaparin pharmacodynamics pathway; fondaparinux pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN extracellular space (ortholog) NW_004955406 14024183 14036206 - 102008913 AGCD01005956;GBDK01194209;XM_005374876 XP_005374933 MODEL 8957492 pseudo LOC102019878 serine/threonine/tyrosine-interacting protein pseudogene NW_004955623 1038 1776 - 102019878 AGCD01077398 MODEL 10065053 protein-coding LOC106150057 uncharacterized LOC106150057 NW_004955463 13414812 13446351 - 106150057 AGCD01049866;AGCD01049867;XM_013521491 XP_013376945 MODEL 9012846 pseudo LOC102022354 phospholipase DDHD2-like NW_004955454 3950247 3952158 + 102022354 AGCD01045106 MODEL 39132292 rrna 5S_rRNA 5S ribosomal RNA 9030709 protein-coding Hmga2 high mobility group AT-hook 2 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); C2H2 zinc finger domain binding (ortholog); cAMP response element binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adrenal gland development (ortholog); base-excision repair (ortholog); PARTICIPATES IN Ras mediated signaling pathway; ASSOCIATED WITH Birth Weight (ortholog); disease of cellular proliferation (ortholog); hamartoma (ortholog); FOUND IN nuclear chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955458 12493790 12624805 + 102023008 AGCD01047780;AGCD01047781;AGCD01047782;AGCD01047783;AGCD01047784;GBCE01155682;GBDJ01377489;XM_013521020 XP_013376474 MODEL 8820537 protein-coding LOC102017970 zinc finger protein 624 NW_004955467 1957286 2017814 - 102017970 AGCD01051298;AGCD01051299;GBDI01212656;XM_005399322 XP_005399379 MODEL 8935695 protein-coding Gon4l gon-4 like ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Ependymomas (ortholog); intellectual disability (ortholog); Li-Takada-Miyake syndrome (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 1990202 2054614 - 102007701 AGCD01071878;AGCD01071879;AGCD01071880;AGCD01071881;AGCD01071882;GBDF01128223;XM_005411606;XM_005411607;XM_005411609;XM_013508237 XP_005411663;XP_005411664;XP_005411666;XP_013363691 MODEL 8895643 protein-coding B4galnt4 beta-1,4-N-acetyl-galactosaminyltransferase 4 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog) NW_004955476 11624612 11635317 - 102012641 AGCD01055466;AGCD01055467;GBDI01059942;GBDJ01087029;XM_013502997 XP_013358451 MODEL 9061175 protein-coding Akt1s1 AKT1 substrate 1 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell size (ortholog); negative regulation of protein kinase activity (ortholog); negative regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Reperfusion Injury (ortholog); Spinal Cord Injuries (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); TORC1 complex (ortholog) NW_004955559 1055998 1063192 + 102028475 AGCD01073627;GBDF01308323;XM_005412818;XM_005412820;XM_005412821;XM_013508970;XM_013508971 XP_005412875;XP_005412877;XP_005412878;XP_013364424;XP_013364425 MODEL 9010803 protein-coding Gckr glucokinase regulator ENCODES a protein that exhibits carbohydrate binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN intracellular glucose homeostasis (ortholog); negative regulation of glucokinase activity (ortholog); protein import into nucleus (ortholog); PARTICIPATES IN glycogen metabolic pathway; ASSOCIATED WITH end stage renal disease (ortholog); Hypertriglyceridemia (ortholog); Metabolic Syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955469 9461541 9485034 + 102004056 AGCD01052504;XM_005400572 XP_005400629 MODEL 8733138 protein-coding Fam216a family with sequence similarity 216 member A NW_004955482 7384031 7396341 + 102021347 AGCD01057464;AGCD01057465;AGCD01057466;GBDF01002658;XM_005403144;XM_005403145;XM_005403146;XM_005403147;XM_005403148;XM_005403149 XP_005403201;XP_005403202;XP_005403203;XP_005403204;XP_005403205;XP_005403206 MODEL 8800130 protein-coding Psors1c2 psoriasis susceptibility 1 candidate 2 ASSOCIATED WITH multiple myeloma (ortholog) NW_004955583 975037 977944 - 102024627 AGCD01075875;GBDJ01298572;XM_005414333;XM_013509772;XM_013509773 XP_005414390;XP_013365226;XP_013365227 MODEL 8887047 protein-coding LOC102009953 uncharacterized LOC102009953 NW_004955489 8135465 8209866 - 102009953 AGCD01060001;AGCD01060002;AGCD01060003;AGCD01060004;AGCD01060005;AGCD01060006;AGCD01060007;GBDJ01241202;XM_013504450 XP_013359904 MODEL 8939400 protein-coding Fgr FGR proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits Fc-gamma receptor I complex binding (ortholog); immunoglobulin receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN bone mineralization (ortholog); defense response to Gram-positive bacterium (ortholog); integrin-mediated signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); plasma membrane (ortholog) NW_004955452 6840274 6863460 - 102007181 AGCD01044127;GBDJ01006866;XM_005394919;XM_005394920;XM_005394921;XM_005394922;XM_013519583;XM_013519584 XP_005394976;XP_005394977;XP_005394978;XP_005394979;XP_013375037;XP_013375038 MODEL 39131667 rrna 5S_rRNA 5S ribosomal RNA 8870183 protein-coding Asb12 ankyrin repeat and SOCS box containing 12 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); FOUND IN ubiquitin ligase complex (ortholog) NW_004955475 4429854 4436633 + 102003964 AGCD01054880;GBCB01005243;XM_005401554;XM_005401555 XP_005401611;XP_005401612 MODEL 8852424 protein-coding Dnah11 dynein axonemal heavy chain 11 INVOLVED IN cilium movement (ortholog); determination of left/right asymmetry in nervous system (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); autism spectrum disorder (ortholog); Coronary Disease (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axoneme (ortholog) NW_004955410 24045333 24352626 + 102006882 AGCD01011122;AGCD01011123;AGCD01011124;AGCD01011125;AGCD01011126;GBBH01091428;GBBH01091430;XM_005377377;XM_005377378 XP_005377434;XP_005377435 MODEL 8979433 protein-coding Pde4c phosphodiesterase 4C ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; FOUND IN cilium (ortholog) NW_004955524 3199534 3218013 + 102020278 AGCD01068867;GBCQ01169107;XM_013507254;XM_013507255;XM_013507256;XM_013507257;XM_013507258;XM_013507259;XM_013507260;XM_013507261 XP_013362708;XP_013362709;XP_013362710;XP_013362711;XP_013362712;XP_013362713;XP_013362714;XP_013362715 MODEL 8950746 pseudo LOC102010742 pre-mRNA-splicing factor RBM22 pseudogene NW_004955444 6844758 6848013 + 102010742 AGCD01038875 MODEL 8987133 protein-coding LOC102019879 microcephalin-like NW_004955861 1015 15323 + 102019879 AGCD01078513;AGCD01078514;GBCB01113291;GBDK01433180;XM_013510200 XP_013365654 MODEL 8804605 protein-coding Cfap96 cilia and flagella associated protein 96 ASSOCIATED WITH developmental and epileptic encephalopathy 1 (ortholog); intellectual disability (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic microtubule (ortholog) NW_004955403 23617764 23634689 - 102025310 AGCD01002248;GBBH01172709;XM_005373458;XM_005373459;XM_005373461;XM_013512932;XM_013512939;XM_013512946 XP_005373515;XP_005373516;XP_005373518;XP_013368386;XP_013368393;XP_013368400 MODEL 8710624 protein-coding Ttc19 tetratricopeptide repeat domain 19 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); infertility (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955467 1381105 1405509 + 102014124 AGCD01051262;AGCD01051263;AGCD01051264;GBCE01045510;GBCQ01125396;XM_005399316 XP_005399373 MODEL 8728904 protein-coding Adora1 adenosine A1 receptor ENCODES a protein that exhibits G protein-coupled adenosine receptor activity (ortholog); G protein-coupled receptor binding (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN response to auditory stimulus; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cognition (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); Bradycardia (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN asymmetric synapse (ortholog); axolemma (ortholog); basolateral plasma membrane (ortholog) NW_004955406 39148811 39183577 + 102009685 AGCD01006621;GBDJ01197471;XM_013522558;XM_013522560;XM_013522562;XM_013522567;XM_013522569;XM_013522572;XM_013522574 XP_013378012;XP_013378014;XP_013378016;XP_013378021;XP_013378023;XP_013378026;XP_013378028 MODEL 39133564 snorna U3 Small nucleolar RNA U3 8819299 pseudo LOC102003423 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955464 11721827 11722678 - 102003423 AGCD01050161 MODEL 8726064 protein-coding Bfsp1 beaded filament structural protein 1 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN cell maturation (ortholog); intermediate filament organization (ortholog); lens fiber cell development (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 33 (ortholog); coloboma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intermediate filament (ortholog) NW_004955415 26507381 26535545 - 102009495 AGCD01016596;AGCD01016597;AGCD01016598;GBCE01168540;XM_005380906;XM_013512110 XP_005380963;XP_013367564 MODEL 8775736 protein-coding LOC102012342 uncharacterized LOC102012342 NW_004955504 2063804 2068813 - 102012342 AGCD01064853;GBDI01262175;GBDK01263929;XM_013505916 XP_013361370 MODEL 9047114 protein-coding Trim54 tripartite motif containing 54 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN negative regulation of microtubule depolymerization (ortholog); FOUND IN microtubule associated complex (ortholog) NW_004955469 9258946 9277275 + 102026740 AGCD01052498;GBCB01004527;XM_005400479 XP_005400536 MODEL 8900418 pseudo LOC102024086 aldose reductase-related protein 2 pseudogene NW_004955454 8367664 8368575 + 102024086 AGCD01045324 MODEL 8804927 protein-coding Themis thymocyte selection associated INVOLVED IN negative T cell selection (ortholog); positive T cell selection (ortholog); T cell receptor signaling pathway (ortholog); ASSOCIATED WITH celiac disease (ortholog); inflammatory bowel disease (ortholog); T-Lymphocytopenia (ortholog); FOUND IN cell-cell junction (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955436 8743835 8909040 - 102010627 AGCD01033751;AGCD01033752;GBDI01273776;XM_005389174;XM_005389175;XM_005389176;XM_005389177 XP_005389231;XP_005389232;XP_005389233;XP_005389234 MODEL 8958487 protein-coding Kiaa1217 KIAA1217 ortholog INVOLVED IN embryonic skeletal system development (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955429 4587329 5064712 - 102011566 AGCD01028494;AGCD01028495;AGCD01028496;AGCD01028497;AGCD01028498;AGCD01028499;AGCD01028500;AGCD01028501;AGCD01028502;AGCD01028503;GBDK01092702;XM_005386916;XM_005386920;XM_005386924;XM_005386925;XM_005386926;XM_013515407;XM_013515408;XM_013515409;XM_013515410;XM_013515411;XM_013515412;XM_013515413;XM_013515414;XM_013515415;XM_013515416;XM_013515417;XM_013515418;XM_013515419;XM_013515420;XM_013515421 XP_005386973;XP_005386977;XP_005386981;XP_005386982;XP_005386983;XP_013370861;XP_013370862;XP_013370863;XP_013370864;XP_013370865;XP_013370866;XP_013370867;XP_013370868;XP_013370869;XP_013370870;XP_013370871;XP_013370872;XP_013370873;XP_013370874;XP_013370875 MODEL 39134153 misc_rna 7SK 7SK RNA 8789124 protein-coding Hdac3 histone deacetylase 3 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cyclin binding (ortholog); INVOLVED IN cellular response to fluid shear stress (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Anaphylaxis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955415 12138520 12154234 + 102004802 AGCD01016185;GBDF01049421;XM_005380723;XM_005380724;XM_005380725 XP_005380780;XP_005380781;XP_005380782 MODEL 8752182 protein-coding LOC102005156 olfactory receptor 4X2-like NW_004955422 356829 357764 + 102005156 AGCD01022404;XM_005384936 XP_005384993 MODEL 9030127 protein-coding LOC102019560 uncharacterized LOC102019560 NW_004955403 51588408 51613490 - 102019560 AGCD01002995;AGCD01002996;GBDF01277743;XM_013514373;XM_013514376;XM_013514377;XM_013514383;XM_013514388;XM_013514389 XP_013369827;XP_013369830;XP_013369831;XP_013369837;XP_013369842;XP_013369843 MODEL 8886137 protein-coding Apbb3 amyloid beta precursor protein binding family B member 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN negative regulation of cell cycle phase transition (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of protein secretion (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nuclear body (ortholog) NW_004955418 118577 126021 + 102030632 AGCD01018668;GBDJ01340796;XM_005382021;XM_005382024;XM_013512904;XM_013512905 XP_005382078;XP_005382081;XP_013368358;XP_013368359 MODEL 8853723 protein-coding Akt2 AKT serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); molecular function activator activity (ortholog); protein kinase activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cellular response to high light intensity (ortholog); cellular response to hormone stimulus (ortholog); PARTICIPATES IN altered insulin responsive facilitative sugar transporter mediated glucose transport pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Breast Neoplasms (ortholog); colorectal cancer (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955578 950258 1004438 + 102017721 AGCD01075504;GBCB01001517;XM_005414067;XM_005414068;XM_005414069 XP_005414124;XP_005414125;XP_005414126 MODEL 8833858 protein-coding Acvr1 activin A receptor type 1 ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type I (ortholog); ATP binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); acute inflammatory response (ortholog); atrial septum primum morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); bicuspid aortic valve disease (ortholog); Breast Neoplasms (ortholog); FOUND IN activin receptor complex (ortholog); apical part of cell (ortholog); plasma membrane (ortholog) NW_004955449 15587958 15706432 + 102013986 AGCD01042198;AGCD01042199;GBCE01051925;XM_005393398;XM_005393399;XM_005393403;XM_005393405;XM_013518776;XM_013518777;XM_013518778;XM_013518779;XM_013518780 XP_005393455;XP_005393456;XP_005393460;XP_005393462;XP_013374230;XP_013374231;XP_013374232;XP_013374233;XP_013374234 MODEL 8843669 trna trnL2 tRNA-Leu MT 2643 2718 + 15822217 9026807 protein-coding LOC102005915 translation initiation factor IF-2-like NW_004955465 13253449 13255976 - 102005915 AGCD01050595;GBDJ01330279;XM_005399010 XP_005399067 MODEL 8927994 protein-coding Wbp1l WW domain binding protein 1 like ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); hemopoiesis (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH nevoid basal cell carcinoma syndrome (ortholog) NW_004955485 7655921 7710387 - 102011546 AGCD01058669;AGCD01058670;AGCD01058671;AGCD01058672;GBCE01054786;XM_005403823;XM_005403824;XM_013504076;XM_013504077 XP_005403880;XP_005403881;XP_013359530;XP_013359531 MODEL 10345881 protein-coding Card6 caspase recruitment domain family member 6 INVOLVED IN cholesterol efflux (ortholog); cholesterol import (ortholog); foam cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955426 25123436 25132198 + 106148678 AGCD01026702;GBDJ01358613;XM_013514977 XP_013370431 MODEL 8769910 ncrna LOC102022357 uncharacterized LOC102022357 NW_004955455 9450420 9454003 - 102022357 AGCD01045922;GBDF01053970;XR_262850 MODEL 39133889 misc_rna 7SK 7SK RNA 9058261 protein-coding Atp5f1a ATP synthase F1 subunit alpha ENCODES a protein that exhibits ADP binding (ortholog); angiostatin binding (ortholog); ATP binding (ortholog); INVOLVED IN ATP biosynthetic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to nitric oxide (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); combined oxidative phosphorylation deficiency 22 (ortholog); Endotoxemia (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) NW_004955402 31652226 31662114 - 102027364 AGCD01000801;GBDK01016982;XM_005372864 XP_005372921 MODEL 8808283 protein-coding Plcb2 phospholipase C beta 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN cell chemotaxis (ortholog); detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH Moebius syndrome (ortholog); thrombocytopenia (ortholog); FOUND IN cytoplasm (ortholog); G-protein beta/gamma-subunit complex (ortholog); neuronal dense core vesicle (ortholog) NW_004955416 7221326 7240743 - 102017866 AGCD01016970;GBDJ01275265;XM_005381228;XM_005381229;XM_005381230;XM_013512599;XM_013512600 XP_005381285;XP_005381286;XP_005381287;XP_013368053;XP_013368054 MODEL 8746955 protein-coding B4galt1 beta-1,4-galactosyltransferase 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); beta-tubulin binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); angiogenesis involved in wound healing (ortholog); binding of sperm to zona pellucida (ortholog); PARTICIPATES IN galactose metabolic pathway; galactosemia pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IId (ortholog); endocrine system disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) NW_004955472 2490649 2536053 + 102011303 AGCD01053467;AGCD01053468;AGCD01053469;AGCD01053470;AGCD01053471;GBCE01026609;XM_005401108;XM_013522991;XM_013522992;XM_013522993;XM_013522994;XM_013522995 XP_005401165;XP_013378445;XP_013378446;XP_013378447;XP_013378448;XP_013378449 MODEL 8977051 protein-coding LOC102017197 carbonyl reductase [NADPH] 1-like NW_004955407 35239477 35254421 + 102017197 AGCD01007733;AGCD01007734;GBCQ01007846;GBDF01041818;XM_013504561 XP_013360015 MODEL 39132957 snrna U1 U1 spliceosomal RNA 9008644 ncrna LOC102006962 uncharacterized LOC102006962 NW_004955442 18374768 18409901 + 102006962 AGCD01038005;AGCD01038006;GBCE01069332;XR_262164 MODEL 8908082 protein-coding Adora2a adenosine A2a receptor ENCODES a protein that exhibits alpha-actinin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); astrocyte activation (ortholog); eating behavior (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH amphetamine abuse (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN asymmetric synapse (ortholog); axolemma (ortholog); axon (ortholog) NW_004955455 7886720 7906214 + 102028266 AGCD01045866;GBDJ01093845;XM_005396382;XM_005396384;XM_005396385;XM_005396386;XM_013520322;XM_013520323;XM_013520324 XP_005396439;XP_005396441;XP_005396442;XP_005396443;XP_013375776;XP_013375777;XP_013375778 MODEL 8853886 protein-coding Ints7 integrator complex subunit 7 INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); INTAC complex (ortholog) NW_004955406 5299696 5371496 + 102022459 AGCD01005718;AGCD01005719;AGCD01005720;GBDF01085195;XM_005374746;XM_005374750;XM_013520176 XP_005374803;XP_005374807;XP_013375630 MODEL 9015898 protein-coding Serpind1 serpin family D member 1 ASSOCIATED WITH carotid artery thrombosis (ortholog); disease by infectious agent (ortholog); heparin cofactor II deficiency (ortholog) NW_004955442 19525411 19537986 - 102025297 AGCD01038066;AGCD01081646;GBDK01094174;XM_005391835 XP_005391892 MODEL 8967985 protein-coding Tor4a torsin family 4 member A ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955513 5263299 5265622 + 102003049 AGCD01066964;AGCD01066965;GBBH01207327;GBDI01262912;XM_013506740 XP_013362194 MODEL 8888258 pseudo LOC102017979 NAD-dependent malic enzyme, mitochondrial pseudogene NW_004955475 5686616 5688181 + 102017979 AGCD01054925 MODEL 8909808 pseudo LOC102019881 RWD domain-containing protein 1-like NW_004955403 34871177 34904834 - 102019881 AGCD01002491 MODEL 9050554 pseudo LOC102014961 keratin, type II cytoskeletal 8 pseudogene NW_004955402 62978683 62979775 - 102014961 AGCD01001651 MODEL 39133676 snorna U3 Small nucleolar RNA U3 8791703 protein-coding Dync2i1 dynein 2 intermediate chain 1 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); embryonic skeletal system morphogenesis (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); cilium (ortholog) NW_004955579 1056291 1124623 + 102006724 AGCD01075565;AGCD01075566;AGCD01075567;AGCD01075568;AGCD01075569;AGCD01075570;GBBH01208310;GBDI01257019;XM_013509671 XP_013365125 MODEL 8955236 protein-coding Gclc glutamate-cysteine ligase catalytic subunit ENCODES a protein that exhibits ADP binding (ortholog); glutamate binding (ortholog); glutamate-cysteine ligase activity (ortholog); INVOLVED IN response to auditory stimulus; blood vessel diameter maintenance (ortholog); cell redox homeostasis (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; cysteine metabolic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); cataract (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); glutamate-cysteine ligase complex (ortholog) NW_004955411 2593523 2617553 + 102009808 AGCD01011514;GBCE01117484;XM_005377605 XP_005377662 MODEL 8968557 protein-coding Rem2 RRAD and GEM like GTPase 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog) NW_004955409 37403758 37408312 - 102030048 AGCD01010511;GBDI01226110;XM_005377113 XP_005377170 MODEL 39134462 misc_rna 7SK 7SK RNA 39132497 snrna U6 U6 spliceosomal RNA 10368629 ncrna LOC106147080 uncharacterized LOC106147080 NW_004955408 35085904 35095761 + 106147080 AGCD01008930;GBDF01166002;XR_001231809 MODEL 8934816 protein-coding Fh fumarate hydratase ENCODES a protein that exhibits fumarate hydratase activity (ortholog); histone binding (ortholog); INVOLVED IN arginine metabolic process (ortholog); DNA damage response (ortholog); fumarate metabolic process (ortholog); PARTICIPATES IN altered citric acid cycle pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); breast cancer (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955406 10535801 10558649 + 102018465 AGCD01005864;GBCB01004752;XM_005374820 XP_005374877 MODEL 8959158 protein-coding Pspc1 paraspeckle component 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); membraneless organelle assembly (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); paraspeckles (ortholog) NW_004955497 574678 641885 - 102006258 AGCD01062423;AGCD01062424;AGCD01062425;AGCD01062426;GBCQ01068863;GBDF01053680;XM_005406291 XP_005406348 MODEL 8825026 protein-coding LOC102024088 transmembrane epididymal protein 1A-like NW_004955406 21319459 21320241 + 102024088 AGCD01006123;XM_005375465 XP_005375522 MODEL 10209624 ncrna LOC106150058 uncharacterized LOC106150058 NW_004955463 12929242 12935961 - 106150058 AGCD01049860;GBDF01165326;XR_001236629 MODEL 8879528 protein-coding Themis2 thymocyte selection associated family member 2 INVOLVED IN regulation of B cell activation (ortholog); T cell receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 7058703 7075114 + 102010662 AGCD01044131;GBDK01197221;XM_005394933;XM_013519612;XM_013519613;XM_013519614 XP_005394990;XP_013375066;XP_013375067;XP_013375068 MODEL 8844659 pseudo LOC102005159 E3 SUMO-protein ligase PIAS2-like NW_004955503 7889282 7891162 + 102005159 AGCD01064803 MODEL 8924525 pseudo LOC102010743 olfactory receptor 7G1-like NW_004955563 294341 295318 - 102010743 AGCD01074059 MODEL 9007093 protein-coding Dnah12 dynein axonemal heavy chain 12 INVOLVED IN sperm axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH megacolon (ortholog); Spermatogenic Failure 100 (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955430 7039070 7272927 - 102014930 AGCD01029332;AGCD01029333;AGCD01029334;AGCD01029335;AGCD01029336;AGCD01029337;AGCD01029338;AGCD01029339;AGCD01029340;AGCD01029341;AGCD01029342;GBDI01175777;GBDK01394051;NM_001370885;XM_005387410;XM_013515596;XM_013515597;XM_013515598 NP_001357814;XP_005387467;XP_013371050;XP_013371051;XP_013371052 VALIDATED 8710774 protein-coding Asb13 ankyrin repeat and SOCS box containing 13 NW_004955421 22328393 22380656 - 102024917 AGCD01022132;AGCD01022133;AGCD01022134;GBDF01088974;XM_005383841;XM_013513669 XP_005383898;XP_013369123 MODEL 9009133 protein-coding Hdac4 histone deacetylase 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); aortic aneurysm (ortholog); FOUND IN A band (ortholog); actomyosin (ortholog); chromatin (ortholog) NW_004955542 1629691 1886160 + 102021917 AGCD01071506;AGCD01071507;GBCE01162161;XM_005411176;XM_005411177;XM_005411178;XM_013508107;XM_013508108;XM_013508109;XM_013508110;XM_013508111;XM_013508112;XM_013508113;XM_013508114 XP_005411233;XP_005411234;XP_005411235;XP_013363561;XP_013363562;XP_013363563;XP_013363564;XP_013363565;XP_013363566;XP_013363567;XP_013363568 MODEL 8829829 protein-coding Apc APC regulator of WNT signaling pathway ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); dynein complex binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis specification (ortholog); axonogenesis (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Abdominal Fibromatosis (ortholog); Aberrant Crypt Foci (ortholog); acinar cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); axonal growth cone (ortholog) NW_004955418 2567804 2675062 - 102010905 AGCD01018773;GBDF01009002;XM_005382146;XM_005382148;XM_013512936;XM_013512937;XM_013512938;XM_013512940;XM_013512941;XM_013512942;XM_013512943 XP_005382203;XP_005382205;XP_013368390;XP_013368391;XP_013368392;XP_013368394;XP_013368395;XP_013368396;XP_013368397 MODEL 8885884 protein-coding Hmgb1 high mobility group box 1 ENCODES a protein that exhibits 5S rRNA binding (ortholog); bent DNA binding (ortholog); C-X-C chemokine binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of innate immune response (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN cisplatin drug pathway; mismatch repair pathway; pro-inflammatory cytokine mediated pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN alphav-beta3 integrin-HMGB1 complex (ortholog); cell surface (ortholog); chromatin (ortholog) NW_004955431 15373207 15377339 + 102021697 AGCD01030361;GBCC01001539;GBDI01016404;XM_005387745 XP_005387802 MODEL 8720375 pseudo LOC102005916 COMM domain-containing protein 8 pseudogene NW_004955466 2360352 2361351 - 102005916 AGCD01050734 MODEL 8827418 ncrna LOC102021362 uncharacterized LOC102021362 NW_004955423 24524994 24528461 + 102021362 AGCD01024036;GBCB01042350;XR_260993 MODEL 8872589 protein-coding Cfap97 cilia and flagella associated protein 97 ASSOCIATED WITH dilated cardiomyopathy (ortholog) NW_004955403 23821502 23864809 + 102029140 AGCD01002257;AGCD01002258;AGCD01002259;AGCD01002260;AGCD01002261;GBDF01047888;XM_005373472;XM_005373474;XM_005373475;XM_005373476;XM_005373477;XM_005373478 XP_005373529;XP_005373531;XP_005373532;XP_005373533;XP_005373534;XP_005373535 MODEL 8817817 pseudo LOC102003428 40S ribosomal protein S2 pseudogene NW_004955467 3259017 3259823 - 102003428 AGCD01051332 MODEL 8713381 ncrna LOC102012343 uncharacterized LOC102012343 NW_004955427 8525675 8532142 - 102012343 AGCD01027075;GBDF01226078;XR_261241 MODEL 8976566 protein-coding Fam216b family with sequence similarity 216 member B NW_004955518 676141 695316 + 102027221 AGCD01067743;AGCD01067744;XM_005415322 XP_005415379 MODEL 9043808 ncrna LOC102009955 uncharacterized LOC102009955 NW_004955490 5851097 5894388 + 102009955 AGCD01060211;GBDK01242204;XR_001231206;XR_001231207;XR_264028 MODEL 9043099 protein-coding Wbp2 WW domain binding protein 2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); nuclear estrogen receptor binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); establishment of protein localization to chromatin (ortholog); positive regulation of intracellular estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 107 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955506 6398411 6406970 + 102011685 AGCD01065420;GBDF01010035;XM_005407477;XM_013506054 XP_005407534;XP_013361508 MODEL 8843304 protein-coding Trim55 tripartite motif containing 55 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN diapedesis (ortholog); macrophage migration (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog) NW_004955444 12992362 13034621 - 102018137 AGCD01039088;GBCB01022555;XM_005392155;XM_005392156;XM_005392157;XM_005392158 XP_005392212;XP_005392213;XP_005392214;XP_005392215 MODEL 39133415 snrna U4 U4 spliceosomal RNA 8950179 protein-coding LOC102017199 olfactory receptor 6C4-like NW_004955458 3059124 3060059 + 102017199 AGCD01047269;XM_005397249 XP_005397306 MODEL 39131668 rrna 5S_rRNA 5S ribosomal RNA 39132293 rrna 5S_rRNA 5S ribosomal RNA 8750555 protein-coding Kiaa1328 KIAA1328 ortholog ASSOCIATED WITH intellectual disability (ortholog) NW_004955402 23298244 23591420 + 102013887 AGCD01000621;AGCD01000622;AGCD01000623;AGCD01000624;AGCD01000625;AGCD01000626;AGCD01000627;AGCD01000628;AGCD01000629;GBDF01084579;XM_005372825;XM_005372826;XM_005372827;XM_005372829;XM_005372830;XM_005372832;XM_013510276;XM_013510283;XM_013510287;XM_013510296 XP_005372882;XP_005372883;XP_005372884;XP_005372886;XP_005372887;XP_005372889;XP_013365730;XP_013365737;XP_013365741;XP_013365750 MODEL 9044648 ncrna LOC102019563 uncharacterized LOC102019563 NW_004955405 18550190 18557677 + 102019563 AGCD01005021;GBCE01080090;XR_259388 MODEL 8750443 protein-coding Gclm glutamate-cysteine ligase modifier subunit ENCODES a protein that exhibits glutamate-cysteine ligase activity (ortholog); glutamate-cysteine ligase catalytic subunit binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); blood vessel diameter maintenance (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; cysteine metabolic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH berylliosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Liver Injury (ortholog); FOUND IN glutamate-cysteine ligase complex (ortholog) NW_004955423 782468 805384 + 102011455 AGCD01023420;AGCD01023421;GBBH01187846;XM_005385004 XP_005385061 MODEL 8799638 trna trnM(cat) tRNA-Met MT 3818 3886 + 15822219 8920778 protein-coding Acvr1b activin A receptor type 1B ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); cardiac fibroblast cell development (ortholog); development of primary female sexual characteristics (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); dextro-looped transposition of the great arteries (ortholog); Helicobacter Infections (ortholog); FOUND IN activin receptor complex (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955547 2311573 2366106 + 102029799 AGCD01072268;AGCD01072269;AGCD01072270;AGCD01072271;AGCD01072272;AGCD01072273;AGCD01072274;GBDI01218066;XM_005411922;XM_005411923 XP_005411979;XP_005411980 MODEL 8784150 protein-coding Pde4d phosphodiesterase 4D ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); ATPase binding (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); cAMP/PKA signal transduction (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acrodysostosis (ortholog); Acrodysostosis 2, with or without Hormone Resistance (ortholog); amphetamine abuse (ortholog); FOUND IN calcium channel complex (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955446 7914326 9252527 + 102006721 AGCD01040133;AGCD01040134;AGCD01040135;AGCD01040136;AGCD01040137;AGCD01040138;AGCD01040139;AGCD01040140;AGCD01040141;AGCD01040142;AGCD01040143;AGCD01040144;AGCD01040145;AGCD01040146;AGCD01040147;AGCD01040148;AGCD01040149;AGCD01040150;AGCD01040151;AGCD01040152;AGCD01040153;AGCD01040154;AGCD01040155;AGCD01040156;AGCD01040157;GBDI01327844;XM_005392663;XM_005392664;XM_005392665;XM_005392667;XM_005392668;XM_005392669;XM_005392670;XM_013518413;XM_013518414 XP_005392720;XP_005392721;XP_005392722;XP_005392724;XP_005392725;XP_005392726;XP_005392727;XP_013373867;XP_013373868 MODEL 8914486 protein-coding Serpine1 serpin family E member 1 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to aldosterone (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; hypoxia inducible factor pathway; oxygen homeostasis pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acquired Protein C Deficiency (ortholog); Acute Lung Injury (ortholog); FOUND IN chromaffin granule (ortholog); extracellular exosome (ortholog); extracellular matrix (ortholog) NW_004955456 16147523 16157040 - 102027492 AGCD01046692;GBBH01203227;XM_005396870 XP_005396927 MODEL 9061137 protein-coding Ttc21a tetratricopeptide repeat domain 21A INVOLVED IN flagellated sperm motility (ortholog); spermatid development (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); oligospermia (ortholog); spermatogenic failure 37 (ortholog) NW_004955427 24833021 24862199 - 102028112 AGCD01027524;GBDF01085603;XM_013515069;XM_013515070;XM_013515071;XM_013515072;XM_013515073;XM_013515074 XP_013370523;XP_013370524;XP_013370525;XP_013370526;XP_013370527;XP_013370528 MODEL 8922344 ncrna LOC102022361 uncharacterized LOC102022361 NW_004955456 16058739 16062110 - 102022361 AGCD01046686;GBCQ01059827;XR_262914 MODEL 8764131 protein-coding Bfsp2 beaded filament structural protein 2 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN cell maturation (ortholog); cytoskeleton organization (ortholog); intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 12 multiple types (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog) NW_004955501 5083456 5145256 - 102030332 AGCD01064150;AGCD01064151;AGCD01064152;GBCE01061604;XM_005406819 XP_005406876 MODEL 8765968 pseudo LOC102019883 60S ribosomal protein L17 pseudogene NW_004955452 1122314 1123197 + 102019883 AGCD01043831 MODEL 9023900 protein-coding Atp5f1b ATP synthase F1 subunit beta ENCODES a protein that exhibits ADP binding (ortholog); angiostatin binding (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); ATP biosynthetic process (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH acute kidney failure (ortholog); cardiomyopathy (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) NW_004955458 4188167 4195575 - 102028384 AGCD01047381;AGCD01047382;AGCD01047383;GBCQ01010805;XM_013520804 XP_013376258 MODEL 39132958 snrna U1 U1 spliceosomal RNA 8875362 protein-coding Tox thymocyte selection associated high mobility group box ENCODES a protein that exhibits chromatin DNA binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell lineage commitment (ortholog); CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment (ortholog); CD8-positive, alpha-beta T cell lineage commitment (ortholog); FOUND IN nucleus (ortholog) NW_004955444 19453789 19796419 + 102004528 AGCD01039281;AGCD01039282;AGCD01039283;AGCD01039284;AGCD01039285;AGCD01039286;AGCD01039287;AGCD01039288;AGCD01039289;AGCD01039290;GBDI01356789;XM_005392187;XM_005392188;XM_005392189;XM_005392190;XM_013518215 XP_005392244;XP_005392245;XP_005392246;XP_005392247;XP_013373669 MODEL 8745287 protein-coding Apc2 APC regulator of WNT signaling pathway 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); autosomal recessive intellectual developmental disorder 74 (ortholog); Breast Neoplasms (ortholog); FOUND IN actin filament (ortholog); catenin complex (ortholog); cytoplasm (ortholog) NW_004955495 6466434 6489612 - 102003255 AGCD01062082;GBDF01209833;XM_005405966;XM_005405967 XP_005406023;XP_005406024 MODEL 8731492 protein-coding B4galt2 beta-1,4-galactosyltransferase 2 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cerebellar Purkinje cell layer development (ortholog); locomotory behavior (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955537 3506836 3516436 + 102012578 AGCD01070960;GBBH01172270;XM_005410710;XM_013507782 XP_005410767;XP_013363236 MODEL 9065668 pseudo LOC102012344 protein AMN1 homolog pseudogene NW_004955505 4070700 4071337 + 102012344 AGCD01065083;XR_264308 MODEL 8874398 protein-coding LOC102006963 sialic acid-binding Ig-like lectin 14 NW_004955558 1289644 1293742 - 102006963 AGCD01073431;GBDK01013795;XM_005412746 XP_005412803 MODEL 8821738 protein-coding Gon7 GON7 subunit of KEOPS complex INVOLVED IN tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat Syndrome 9 (ortholog); FOUND IN EKC/KEOPS complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955438 15319033 15321648 - 102004120 AGCD01035365;GBBH01060839;XM_005390343 XP_005390400 MODEL 8717272 protein-coding Adora2b adenosine A2b receptor ENCODES a protein that exhibits G protein-coupled adenosine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled adenosine receptor signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Neoplasm Metastasis (ortholog); Reperfusion Injury (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955467 1342271 1363149 + 102011637 AGCD01051262;GBDJ01175337;XM_005399305 XP_005399362 MODEL 8931736 protein-coding Akt3 AKT serine/threonine kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase C binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN brain morphogenesis (ortholog); cellular response to insulin stimulus (ortholog); homeostasis of number of cells within a tissue (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase-Akt signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH capillary hemangioma (ortholog); colon cancer (ortholog); complex cortical dysplasia with other brain malformations (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955406 6907876 7163672 - 102027606 AGCD01005762;AGCD01005763;AGCD01005764;AGCD01005765;GBCE01188426;XM_005374758;XM_005374759;XM_005374760;XM_013520333 XP_005374815;XP_005374816;XP_005374817;XP_013375787 MODEL 8859869 protein-coding Trim56 tripartite motif containing 56 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN defense response to virus (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955456 16181890 16185598 - 102028268 AGCD01046693;GBBH01228287;XM_005396871;XM_013520643 XP_005396928;XP_013376097 MODEL 39131669 rrna 5S_rRNA 5S ribosomal RNA 39133890 misc_rna 7SK 7SK RNA 9040282 protein-coding LOC102010745 zinc finger protein 20-like NW_004955569 269498 273133 + 102010745 AGCD01074571;XM_005413507 XP_005413564 MODEL 8908461 pseudo LOC102017980 60S ribosomal protein L37 pseudogene NW_004955478 84577 84852 + 102017980 AGCD01055731 MODEL 9057118 protein-coding LOC102014964 olfactory receptor 2T8-like NW_004955619 151567 152502 - 102014964 AGCD01077343;XM_005415008 XP_005415065 MODEL 8812140 protein-coding Plcb3 phospholipase C beta 3 ENCODES a protein that exhibits calmodulin binding (ortholog); molecular adaptor activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); inositol trisphosphate metabolic process (ortholog); phosphatidylinositol catabolic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH chronic ulcer of skin (ortholog); Experimental Diabetes Mellitus (ortholog); Huntington's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955422 20810871 20827267 - 102017247 AGCD01023089;AGCD01023090;GBDF01280248;GBDK01071508;XM_005384625 XP_005384682 MODEL 39134154 misc_rna 7SK 7SK RNA 8774111 protein-coding Serpine2 serpin family E member 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN blood coagulation (ortholog); cerebellar granular layer morphogenesis (ortholog); dense core granule biogenesis (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); brain edema (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955453 10049822 10076155 + 102019660 AGCD01044782;GBDF01187903;XM_005395484 XP_005395541 MODEL 8971807 protein-coding Pde4dip phosphodiesterase 4D interacting protein ENCODES a protein that exhibits enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN astral microtubule organization (ortholog); positive regulation of microtubule nucleation (ortholog); protein-containing complex assembly (ortholog); FOUND IN centrosome (ortholog); cortical microtubule plus-end (ortholog); cytoplasm (ortholog) NW_004955568 1321053 1546351 - 102017074 AGCD01074545;AGCD01074546;AGCD01074547;GBDI01077273;XM_005413474;XM_005413475;XM_013509336;XM_013509337;XM_013509339;XM_013509340;XM_013509341;XM_013509342;XM_013509343;XM_013509344;XM_013509345;XM_013509346;XM_013509347;XM_013509348;XR_265041 XP_005413531;XP_005413532;XP_013364790;XP_013364791;XP_013364793;XP_013364794;XP_013364795;XP_013364796;XP_013364797;XP_013364798;XP_013364799;XP_013364800;XP_013364801;XP_013364802 MODEL 8700207 protein-coding Dync2i2 dynein 2 intermediate chain 2 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); early infantile epileptic encephalopathy (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955570 1076498 1086629 - 102030680 AGCD01074785;AGCD01074786;GBDJ01014754;XM_005413560;XM_013509405;XM_013509406;XM_013509407;XM_013509408;XM_013509409 XP_005413617;XP_013364859;XP_013364860;XP_013364861;XP_013364862;XP_013364863 MODEL 39134463 misc_rna 7SK 7SK RNA 10157374 ncrna LOC106147081 uncharacterized LOC106147081 NW_004955517 995794 1004546 + 106147081 AGCD01067588;GBCE01159944;XR_001231810;XR_001231811 MODEL 8984309 protein-coding Ints8 integrator complex subunit 8 INVOLVED IN protein localization to chromatin (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR HYPOPLASIA AND SPASTICITY (ortholog); prostate cancer (ortholog); FOUND IN chromatin (ortholog); INTAC complex (ortholog); integrator complex (ortholog) NW_004955417 10975716 11027697 + 102028858 AGCD01018113;AGCD01018114;AGCD01018115;AGCD01018116;AGCD01018117;AGCD01018118;GBDF01005684;XM_005381819 XP_005381876 MODEL 39133418 snrna U4 U4 spliceosomal RNA 8716606 protein-coding Card9 caspase recruitment domain family member 9 ENCODES a protein that exhibits CARD domain binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antifungal innate immune response (ortholog); apoptotic signaling pathway (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); genetic disease (ortholog); IgA glomerulonephritis (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955513 4350873 4359345 + 102010082 AGCD01066927;GBBH01090040;XM_005408509;XM_013506614;XM_013506615;XM_013506616 XP_005408566;XP_013362068;XP_013362069;XP_013362070 MODEL 8705700 ncrna LOC102005160 uncharacterized LOC102005160 NW_004955505 2073316 2169827 - 102005160 AGCD01064984;AGCD01064985;GBDF01195356;XR_001231571;XR_264302;XR_264303 MODEL 9018143 protein-coding Thg1l tRNA-histidine guanylyltransferase 1 like ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN mitochondrial fusion (ortholog); protein homotetramerization (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 28 (ortholog); Fibrosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); transferase complex (ortholog) NW_004955408 11857380 11863786 + 102017541 AGCD01008319;GBDI01276272;XM_013508818;XM_013508819 XP_013364272;XP_013364273 MODEL 8828715 ncrna LOC102005921 uncharacterized LOC102005921 NW_004955468 5830269 5849954 + 102005921 AGCD01051978;GBDF01113513;XR_263392 MODEL 8918534 protein-coding LOC102019567 zinc finger protein 85-like NW_004955454 7180326 7196465 + 102019567 AGCD01045284;AGCD01045285;AGCD01045286;GBDI01206872;XM_013520198 XP_013375652 MODEL 8931203 protein-coding Asb14 ankyrin repeat and SOCS box containing 14 NW_004955430 7014091 7038751 - 102013959 AGCD01029331;AGCD01029332;GBBH01019933;XM_013515599 XP_013371053 MODEL 8888362 pseudo LOC102021363 olfactory receptor 7D4-like NW_004955495 413973 415050 + 102021363 AGCD01061628;XM_005406119 MODEL 9028732 protein-coding Cfap97d1 CFAP97 domain containing 1 INVOLVED IN sperm axoneme assembly (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 17072403 17077642 + 102006197 AGCD01043717;GBDF01007435;XM_005394509 XP_005394566 MODEL 8797367 pseudo LOC102003430 olfactory receptor 10J5-like NW_004955468 11314436 11315226 - 102003430 AGCD01052125 MODEL 9066599 protein-coding Ren renin ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); insulin-like growth factor receptor binding (ortholog); INVOLVED IN angiotensin maturation (ortholog); cell maturation (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN benazepril pharmacodynamics pathway; candesartan pharmacodynamics pathway; captopril pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); anemia (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955406 40016624 40026286 - 102018155 AGCD01006651;XM_005375286 XP_005375343 MODEL 8905429 protein-coding Wbp2nl WBP2 N-terminal like INVOLVED IN regulation of cytosolic calcium ion concentration (ortholog); FOUND IN sperm flagellum (ortholog); sperm head (ortholog) NW_004955413 27402614 27442106 + 102030406 AGCD01014504;AGCD01014505;AGCD01014506;AGCD01014507;GBDF01123498;XM_005379389;XM_005379391;XM_005379392;XM_005379393;XM_005379394 XP_005379446;XP_005379448;XP_005379449;XP_005379450;XP_005379451 MODEL 9014419 ncrna LOC102019884 uncharacterized LOC102019884 NW_004955453 15567192 15594161 - 102019884 AGCD01044894;GBDF01187134;XR_001236126;XR_262747 MODEL 39132961 snrna U1 U1 spliceosomal RNA 10184994 ncrna LOC106150059 uncharacterized LOC106150059 NW_004955463 5329698 5357309 + 106150059 AGCD01049638;GBDF01014914;XR_001236630 MODEL 8708231 protein-coding Psph phosphoserine phosphatase ENCODES a protein that exhibits identical protein binding (ortholog); L-phosphoserine phosphatase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); L-serine biosynthetic process (ortholog); L-serine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); amino acid metabolic disorder (ortholog); epilepsy (ortholog); FOUND IN cytosol (ortholog) NW_004955456 8198739 8212111 - 102029365 AGCD01046460;AGCD01046461;GBDF01278340;XM_005396697;XM_013520546 XP_005396754;XP_013376000 MODEL 39134155 misc_rna 7SK 7SK RNA 39132294 rrna 5S_rRNA 5S ribosomal RNA 8962160 protein-coding Apcdd1 APC down-regulated 1 ENCODES a protein that exhibits identical protein binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN astrocyte cell migration (ortholog); hair follicle development (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH hypotrichosis 1 (ortholog); obesity (ortholog); FOUND IN plasma membrane (ortholog) NW_004955402 1932685 1947680 - 102019450 AGCD01000062;GBCE01118898;GBDI01187853;XM_005372586 XP_005372643 MODEL 8913903 protein-coding B4galt3 beta-1,4-galactosyltransferase 3 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); galactosyltransferase activity (ortholog); INVOLVED IN glucosylceramide metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955468 12934521 12945435 - 102004919 AGCD01052193;GBDF01248735;XM_005400263;XM_013522353;XM_013522354;XM_013522355 XP_005400320;XP_013377807;XP_013377808;XP_013377809 MODEL 8734928 protein-coding Kiaa1549 KIAA1549 ortholog ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); malignant astrocytoma (ortholog); FOUND IN photoreceptor connecting cilium (ortholog) NW_004955494 4067813 4152368 + 102009623 AGCD01061493;GBBH01207967;XM_005405541 XP_005405598 MODEL 8965128 protein-coding Dnah14 dynein axonemal heavy chain 14 ASSOCIATED WITH epilepsy (ortholog); Hydrops Fetalis (ortholog); Neurodevelopmental Disorders (ortholog) NW_004955520 418041 735810 - 102005744 AGCD01068016;AGCD01068017;AGCD01068018;AGCD01068019;AGCD01068020;AGCD01068021;AGCD01068022;AGCD01068023;AGCD01068024;AGCD01068025;AGCD01068026;AGCD01068027;AGCD01068028;AGCD01068029;AGCD01068030;AGCD01068031;GBDF01049700;XM_013507033;XM_013507034;XM_013507035;XM_013507036;XM_013507037;XM_013507038;XM_013507039;XM_013507040;XM_013507041;XM_013507042;XM_013507043;XM_013507044;XM_013507045;XM_013507046;XM_013507047;XM_013507048 XP_013362487;XP_013362488;XP_013362489;XP_013362490;XP_013362491;XP_013362492;XP_013362493;XP_013362494;XP_013362495;XP_013362496;XP_013362497;XP_013362498;XP_013362499;XP_013362500;XP_013362501;XP_013362502 MODEL 8976659 trna trnN(gtt) tRNA-Asn MT 5085 5157 - 15822222 9042453 protein-coding Gcm1 glial cells missing transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte fate commitment (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); cell differentiation involved in embryonic placenta development (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955411 2872758 2917154 + 102011634 AGCD01011521;AGCD01011522;AGCD01011523;AGCD01011524;GBDF01057346;XM_005377607;XM_005377608;XM_005377609 XP_005377664;XP_005377665;XP_005377666 MODEL 8779337 protein-coding Acvr1c activin A receptor type 1C ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); apoptotic nuclear changes (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH retinal degeneration (ortholog); RETINAL DYSTROPHY WITH INNER RETINAL DYSFUNCTION AND GANGLION CELL ABNORMALITIES (ortholog); FOUND IN activin receptor complex (ortholog); cell surface (ortholog) NW_004955449 15814230 15864747 + 102016002 AGCD01042203;GBDI01023047;XM_005393407 XP_005393464 MODEL 9002035 protein-coding Hmgb2 high mobility group box 2 ENCODES a protein that exhibits chemoattractant activity (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell chemotaxis (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); hepatocellular carcinoma (ortholog); Knee Osteoarthritis (ortholog); FOUND IN chromatin (ortholog); condensed chromosome (ortholog); cytoplasm (ortholog) NW_004955403 33656314 33659115 + 102025423 AGCD01002458;AGCD01002459;GBDF01002195;XM_005373541 XP_005373598 MODEL 9046623 protein-coding Hdac5 histone deacetylase 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN cellular response to fluid shear stress (ortholog); cellular response to lipopolysaccharide (ortholog); heart development (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); adjustment disorder (ortholog); bipolar disorder (ortholog); FOUND IN axonal growth cone (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955451 17223217 17246451 - 102008369 AGCD01043730;GBDI01010961;XM_005394517;XM_013519202;XM_013519203;XM_013519204;XM_013519205;XM_013519206;XM_013519207;XM_013519208;XM_013519209 XP_005394574;XP_013374656;XP_013374657;XP_013374658;XP_013374659;XP_013374660;XP_013374661;XP_013374662;XP_013374663 MODEL 8881973 ncrna LOC102010746 uncharacterized LOC102010746 NW_004955446 646029 647588 + 102010746 AGCD01039946;GBDF01235337;XR_262363 MODEL 8989949 protein-coding Ttc21b tetratricopeptide repeat domain 21B ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellum development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); asphyxiating thoracic dystrophy 4 (ortholog); FOUND IN intraciliary transport particle A (ortholog) NW_004955449 8242327 8306012 + 102010959 AGCD01042009;AGCD01042010;GBDF01085390;XM_005393290 XP_005393347 MODEL 8719494 ncrna LOC102019568 uncharacterized LOC102019568 NW_004955455 1787821 1789349 + 102019568 AGCD01045585;GBDF01251154;XR_001236284;XR_001236285 MODEL 8937820 ncrna LOC102024089 uncharacterized LOC102024089 NW_004955456 2073926 2095524 - 102024089 AGCD01046246;AGCD01046247;GBDF01286846;XR_262868 MODEL 8833181 pseudo LOC102017200 17-beta-hydroxysteroid dehydrogenase type 6-like NW_004955458 4635072 4639694 - 102017200 AGCD01047423 MODEL 8919582 protein-coding Atp5f1c ATP synthase F1 subunit gamma ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to nitric oxide (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH COVID-19 (ortholog); obesity (ortholog); schizophrenia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955421 24234473 24253640 + 102008541 AGCD01022209;GBDF01008934;XM_005383875;XM_005383876;XM_005383877;XM_013513724 XP_005383932;XP_005383933;XP_005383934;XP_013369178 MODEL 8818665 pseudo LOC102012345 coiled-coil domain-containing protein 169-like NW_004955427 322526 326614 + 102012345 AGCD01026827 MODEL 8798820 protein-coding Plcb4 phospholipase C beta 4 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of potassium ion transport (ortholog); phospholipase C-activating endothelin receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Auriculocondylar Syndrome (ortholog); Auriculocondylar Syndrome 1 (ortholog); Auriculocondylar Syndrome 2 (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955415 19108120 19462084 + 102021754 AGCD01016463;AGCD01016464;AGCD01016465;AGCD01016466;AGCD01016467;AGCD01016468;AGCD01016469;AGCD01016470;GBCE01136647;JN633115;XM_005380864;XM_005380865;XM_005380866;XM_013512269;XM_013512270;XM_013512271 XP_005380921;XP_005380922;XP_005380923;XP_013367723;XP_013367724;XP_013367725 MODEL 9017104 protein-coding LOC102006965 UDP-glucuronosyltransferase 2A3-like NW_004955447 3496754 3533598 + 102006965 AGCD01040619;AGCD01040620;AGCD01040621;AGCD01040622;AGCD01040623;AGCD01040624;XM_005392817;XM_013518564 XP_005392874;XP_013374018 MODEL 10074625 ncrna LOC106147082 uncharacterized LOC106147082 NW_004955517 975901 994521 + 106147082 AGCD01067588;GBCE01037720;XR_001231812 MODEL 8819818 protein-coding Gopc golgi associated PDZ and coiled-coil motif containing ENCODES a protein that exhibits frizzled binding (ortholog); GTPase regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of anion channel activity (ortholog); negative regulation of protein localization to cell surface (ortholog); spermatid nucleus differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); azoospermia (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955436 743616 777878 - 102022739 AGCD01033556;AGCD01033557;AGCD01033558;GBBH01227741;GBDF01080662;XM_013516616;XM_013516617 XP_013372070;XP_013372071 MODEL 8819123 protein-coding Adpgk ADP dependent glucokinase ENCODES a protein that exhibits ADP-specific glucokinase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955450 4593295 4625091 + 102026275 AGCD01042469;AGCD01042470;GBDI01256553;XM_005393601;XM_005393602 XP_005393658;XP_005393659 MODEL 8870892 protein-coding Aktip AKT interacting protein INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); FHF complex (ortholog); HOPS complex (ortholog) NW_004955433 11237717 11248638 - 102027004 AGCD01031649;GBDF01266347;XM_005388297;XM_005388298;XM_005388299;XM_005388300;XM_013516219;XM_013516220;XM_013516221 XP_005388354;XP_005388355;XP_005388356;XP_005388357;XP_013371673;XP_013371674;XP_013371675 MODEL 39132498 snrna U6 U6 spliceosomal RNA 39133891 misc_rna 7SK 7SK RNA 8830886 pseudo LOC102022364 1,5-anhydro-D-fructose reductase pseudogene NW_004955408 16942735 16943660 - 102022364 AGCD01008449 MODEL 39131670 rrna 5S_rRNA 5S ribosomal RNA 8883518 protein-coding Trim58 tripartite motif containing 58 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); dynein intermediate chain binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of erythrocyte enucleation (ortholog); protein autoubiquitination (ortholog); protein polyubiquitination (ortholog) NW_004955613 229567 243019 + 102027367 AGCD01077204;AGCD01077205;GBBH01172756;GBBH01172759;XM_013510135;XM_013510136 XP_013365589;XP_013365590 MODEL 8841338 ncrna LOC102005164 uncharacterized LOC102005164 NW_004955432 18505196 18551305 - 102005164 AGCD01031143;AGCD01031144;AGCD01031145;AGCD01031146;AGCD01031147;GBDF01151735;XR_261533 MODEL 8869097 protein-coding Bglap bone gamma-carboxyglutamate protein ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); hormone activity (ortholog); INVOLVED IN bone development (ortholog); brain development (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH asthma (ortholog); autosomal dominant hypocalcemia (ortholog); Bone Fractures (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955545 2381091 2382114 + 102022427 AGCD01071898;GBDJ01042544;XM_005411659 XP_005411716 MODEL 8911052 trna trnP(tgg) tRNA-Pro MT 15374 15440 - 15822235 8986989 ncrna LOC102014965 uncharacterized LOC102014965 NW_004955403 22021344 22058506 - 102014965 AGCD01002212;AGCD01002213;AGCD01002214;GBDF01073139;XR_001233459;XR_001233460;XR_259193;XR_259194 MODEL 8788617 protein-coding LOC102017983 histone H3 NW_004955483 832295 834112 - 102017983 AGCD01057632;XM_013503790 XP_013359244 MODEL 8779241 protein-coding Fhad1 forkhead associated phosphopeptide binding domain 1 INVOLVED IN apoptotic process (ortholog); spermatogenesis (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955527 2756630 2879135 - 102014281 AGCD01069466;AGCD01069467;AGCD01069468;AGCD01069469;GBBH01127202;GBDI01262100;XM_013507414 XP_013362868 MODEL 8793544 protein-coding Acvr2a activin A receptor type 2A ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH cocaine dependence (ortholog); colon cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); inhibin-betaglycan-ActRII complex (ortholog) NW_004955440 13849926 13931374 + 102022747 AGCD01036454;GBCB01038196;GBDI01068191;XM_005390789 XP_005390846 MODEL 9030327 protein-coding Serpine3 serpin family E member 3 NW_004955431 4694654 4727080 + 102003993 AGCD01030006;AGCD01030007;XM_005387608 XP_005387665 MODEL 8847617 protein-coding Cfap99 cilia and flagella associated protein 99 NW_004955514 1451451 1490251 + 102023512 AGCD01067050;AGCD01067051;AGCD01067052;AGCD01067053;GBCE01032631;GBDK01283997;XM_005408729;XM_013506810 XP_005408786;XP_013362264 MODEL 8861228 protein-coding Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); intraciliary transport involved in cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); centrosome (ortholog) NW_004955441 10928577 10961194 + 102027573 AGCD01037096;AGCD01037097;AGCD01037098;GBDF01006691;XM_005390934 XP_005390991 MODEL 8949032 protein-coding Tox2 TOX high mobility group box family member 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN female gonad development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to gonadotropin (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955445 13210606 13343344 - 102023539 AGCD01039770;AGCD01039771;GBDJ01115968;XM_005392491;XM_005392492;XM_013518387;XM_013518388;XM_013518389 XP_005392548;XP_005392549;XP_013373841;XP_013373842;XP_013373843 MODEL 9016314 protein-coding Pde5a phosphodiesterase 5A ENCODES a protein that exhibits 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); cGMP binding (ortholog); INVOLVED IN cGMP catabolic process (ortholog); cGMP metabolic process (ortholog); negative regulation of cardiac muscle contraction (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); Hearing Loss (ortholog) NW_004955428 20785497 20904717 + 102022312 AGCD01028127;AGCD01028128;GBCQ01048848;XM_005386794;XM_005386796 XP_005386851;XP_005386853 MODEL 8943463 protein-coding Renbp renin binding protein ENCODES a protein that exhibits ATP binding (ortholog); enzyme inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); N-acetylmannosamine metabolic process (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH COVID-19 (ortholog); dilated cardiomyopathy (ortholog) NW_004955580 610112 615019 - 102024067 AGCD01075615;GBCE01052970;GBCQ01072116;XM_013509702 XP_013365156 MODEL 39133422 snrna U4 U4 spliceosomal RNA 8704588 protein-coding Apcdd1l APC down-regulated 1 like NW_004955445 1025597 1070385 + 102020172 AGCD01039328;AGCD01039329;GBBH01147400;GBCE01148194;XM_013518260 XP_013373714 MODEL 8841218 protein-coding Carf calcium responsive transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); obsolete regulation of DNA-binding transcription factor activity (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN granular component (ortholog); nucleus (ortholog) NW_004955457 11853256 11947909 - 102003414 AGCD01046988;AGCD01046989;AGCD01046990;AGCD01046991;AGCD01046992;AGCD01046993;AGCD01046994;AGCD01046995;AGCD01046996;GBDF01253627;XM_013520701;XM_013520702;XM_013520703;XM_013520704;XM_013520705;XM_013520706;XM_013520707;XM_013520708;XM_013520709;XM_013520710;XM_013520711;XM_013520712;XM_013520713;XM_013520714 XP_013376155;XP_013376156;XP_013376157;XP_013376158;XP_013376159;XP_013376160;XP_013376161;XP_013376162;XP_013376163;XP_013376164;XP_013376165;XP_013376166;XP_013376167;XP_013376168 MODEL 8753426 pseudo LOC102009960 guanylate-binding protein 6-like NW_004955423 4772863 4789903 + 102009960 AGCD01023545 MODEL 8848112 protein-coding Fam217a family with sequence similarity 217 member A NW_004955465 9338943 9356242 + 102010564 AGCD01050490;AGCD01050491;GBDF01190758;XM_005398884;XM_005398885;XM_005398886;XM_005398887;XM_013521835;XM_013521836 XP_005398941;XP_005398942;XP_005398943;XP_005398944;XP_013377289;XP_013377290 MODEL 8995972 protein-coding Gcm2 glial cells missing transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); intracellular calcium ion homeostasis (ortholog); intracellular phosphate ion homeostasis (ortholog); ASSOCIATED WITH familial isolated hypoparathyroidism (ortholog); familial isolated hypoparathyroidism 2 (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) NW_004955465 3523029 3530342 + 102019373 AGCD01050381;GBDI01283548;XM_005398830 XP_005398887 MODEL 8779107 protein-coding Thnsl1 threonine synthase like 1 FOUND IN mitochondrion (ortholog) NW_004955429 4169170 4208097 - 102008131 AGCD01028482;AGCD01028483;GBDF01080744;XM_005386902;XM_005386903;XM_005386904;XM_013515491;XM_013515492;XM_013515493 XP_005386959;XP_005386960;XP_005386961;XP_013370945;XP_013370946;XP_013370947 MODEL 8807163 pseudo LOC102003433 heterogeneous nuclear ribonucleoprotein A1-like NW_004955469 9146985 9148365 + 102003433 AGCD01052493 MODEL 8851668 protein-coding Asb15 ankyrin repeat and SOCS box containing 15 ASSOCIATED WITH renal cell carcinoma (ortholog) NW_004955479 5082941 5130419 + 102013412 AGCD01056340;GBDF01152943;XM_005402327;XM_005402328;XM_005402329;XM_005402331;XM_005402332;XM_005402333;XM_005402334 XP_005402384;XP_005402385;XP_005402386;XP_005402388;XP_005402389;XP_005402390;XP_005402391 MODEL 39132963 snrna U1 U1 spliceosomal RNA 9045173 protein-coding Bgn biglycan ENCODES a protein that exhibits cytokine binding (ortholog); extracellular matrix binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN articular cartilage development (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); ASSOCIATED WITH aortic disease (ortholog); Breast Neoplasms (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); sarcolemma (ortholog) NW_004955580 252183 263179 + 102010847 AGCD01075593;GBCE01004164;XM_005414120;XM_005414121 XP_005414177;XP_005414178 MODEL 10351449 ncrna LOC106150060 uncharacterized LOC106150060 NW_004955463 3999310 4000215 + 106150060 AGCD01049600;GBDF01236154;XR_001236631 MODEL 9022906 protein-coding Ints9 integrator complex subunit 9 INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) NW_004955403 51111418 51199430 - 102016222 AGCD01002988;GBDF01222215;XM_005373781 XP_005373838 MODEL 8760666 protein-coding Gcn1 GCN1 activator of EIF2AK4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein serine/threonine kinase activator activity (ortholog); stalled ribosome sensor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); protein-RNA covalent cross-linking repair (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955455 11416222 11474791 + 102019773 AGCD01046004;AGCD01046005;AGCD01046006;GBDF01085355;XM_013520334 XP_013375788 MODEL 9057127 protein-coding B4galt4 beta-1,4-galactosyltransferase 4 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); N-acetyllactosamine synthase activity (ortholog); UDP-galactosyltransferase activity (ortholog); INVOLVED IN keratan sulfate proteoglycan biosynthetic process (ortholog); lactosylceramide biosynthetic process (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955427 18964578 18982090 - 102016176 AGCD01027357;GBDI01354182;GBDK01395918;XM_013515223 XP_013370677 MODEL 8995005 protein-coding Pspn persephin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); FOUND IN extracellular space (ortholog) NW_004955495 3218720 3220941 + 102014686 AGCD01061838;GBCE01007404;XM_005405723 XP_005405780 MODEL 8948943 protein-coding Kiaa1549l KIAA1549 like NW_004955422 12554879 12676904 - 102021772 AGCD01022796;AGCD01022797;GBDF01187516;XM_013514325;XM_013514326 XP_013369779;XP_013369780 MODEL 9056957 protein-coding LOC102005923 apolipoprotein L3-like NW_004955413 22422434 22450771 - 102005923 AGCD01014300;AGCD01014301;AGCD01014302;GBBH01182541;XM_005379647 XP_005379704 MODEL 9047280 protein-coding Dnah17 dynein axonemal heavy chain 17 INVOLVED IN outer dynein arm assembly (ortholog); ASSOCIATED WITH Dwarfism (ortholog); genetic disease (ortholog); spermatogenic failure 39 (ortholog); FOUND IN axoneme (ortholog); outer dynein arm (ortholog); sperm end piece (ortholog) NW_004955506 4042768 4161022 + 102007139 AGCD01065324;AGCD01065325;AGCD01065326;GBDF01045118;XM_005407377;XM_013506036 XP_005407434;XP_013361490 MODEL 8757332 protein-coding Gorab golgin, RAB6 interacting INVOLVED IN hair follicle morphogenesis (ortholog); non-motile cilium assembly (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); geroderma osteodysplasticum (ortholog); osteoporosis (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955462 6807618 6824296 + 102006321 AGCD01049289;GBDI01026297;XM_005398171 XP_005398228 MODEL 10114810 ncrna LOC106150061 uncharacterized LOC106150061 NW_004955463 12747513 12763216 + 106150061 AGCD01049858;XR_001236632 MODEL 39133892 misc_rna 7SK 7SK RNA 8869078 protein-coding Alad aminolevulinate dehydratase ENCODES a protein that exhibits identical protein binding (ortholog); lead ion binding (ortholog); porphobilinogen synthase activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lead ion (ortholog); heme A biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); ALAD-Deficiency Porphyria (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog) NW_004955419 14093010 14104376 + 102022295 AGCD01020012;GBCE01055436;XM_005382674;XM_005382675;XM_013513133;XM_013513134 XP_005382731;XP_005382732;XP_013368587;XP_013368588 MODEL 8890008 protein-coding LOC102021365 histone H2A.Z ENCODES a protein that exhibits chromatin DNA binding (ortholog); nucleosomal DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to insulin stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN Barr body (ortholog); euchromatin (ortholog); heterochromatin (ortholog) NW_004955496 7733910 7735525 + 102021365 AGCD01062383;AGCD01062384;GBDF01006515;XM_005406261;XM_005406262 XP_005406318;XP_005406319 MODEL 8850776 protein-coding LOC102010748 transmembrane protease serine 11G-like NW_004955447 4856552 4890901 + 102010748 AGCD01040735;GBDF01305458;XM_005392830 XP_005392887 MODEL 8718868 protein-coding Ttc22 tetratricopeptide repeat domain 22 NW_004955464 4592667 4609148 + 102024775 AGCD01049992;GBDI01128402;XM_005398510;XM_013521666 XP_005398567;XP_013377120 MODEL 8882099 protein-coding Carhsp1 calcium regulated heat stable protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN regulation of mRNA stability (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog); P granule (ortholog) NW_004955442 9382360 9388414 + 102015990 AGCD01037679;GBCE01116617;XM_005391211;XM_005391213;XM_013517835 XP_005391268;XP_005391270;XP_013373289 MODEL 8843474 pseudo LOC102024094 coiled-coil domain-containing protein 152 pseudogene NW_004955458 3065969 3066651 + 102024094 AGCD01047269 MODEL 8766523 protein-coding LOC102019885 zinc finger protein 682-like NW_004955454 7307891 7332318 - 102019885 AGCD01045294;GBCC01007309;XM_013520220 XP_013375674 MODEL 8915003 pseudo LOC102017203 granzyme H-like NW_004955409 35681707 35731439 + 102017203 AGCD01010428;AGCD01010429;AGCD01010430;AGCD01010431;AGCD01010432 MODEL 39134156 misc_rna 7SK 7SK RNA 39132295 rrna 5S_rRNA 5S ribosomal RNA 8944601 pseudo LOC102012346 protein FAM184A pseudogene NW_004955428 4406203 4408237 + 102012346 AGCD01027690 MODEL 8809824 protein-coding Atp5f1d ATP synthase F1 subunit delta ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN aerobic respiration (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Aortic Calcification (ortholog); Cardiomegaly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955495 6664394 6666693 - 102011018 AGCD01062087;GBDJ01021003;XM_005405992;XM_005405993 XP_005406049;XP_005406050 MODEL 8855336 protein-coding Dynll1 dynein light chain LC8-type 1 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN intraciliary retrograde transport (ortholog); mitocytosis (ortholog); motile cilium assembly (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH brain ischemia (ortholog); cardiac arrest (ortholog); congestive heart failure (ortholog); FOUND IN axon cytoplasm (ortholog); centrosome (ortholog); COP9 signalosome (ortholog) NW_004955455 11148041 11150860 - 102010027 AGCD01045984;GBCB01022810;XM_005396503;XM_005396504 XP_005396560;XP_005396561 MODEL 39132965 snrna U1 U1 spliceosomal RNA 10328605 ncrna LOC106147083 uncharacterized LOC106147083 NW_004955517 2189871 2202540 + 106147083 AGCD01067619;GBDF01072356;XR_001231813;XR_001231814;XR_001231815;XR_001231816 MODEL 9060627 protein-coding Cfb complement factor B ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, alternative pathway (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); age related macular degeneration 14 (ortholog); anterior uveitis (ortholog); FOUND IN cytoplasmic side of Golgi membrane (ortholog); extracellular space (ortholog); symbiont cell surface (ortholog) NW_004955437 461235 466908 + 102005413 AGCD01034137;GBBH01002155;XM_005389399 XP_005389456 MODEL 39131671 rrna 5S_rRNA 5S ribosomal RNA 8877913 ncrna LOC102009962 uncharacterized LOC102009962 NW_004955423 22423709 22437613 + 102009962 AGCD01023966;GBDF01176631;XR_260987 MODEL 8722007 pseudo LOC102019572 26S protease regulatory subunit 10B-like NW_004955409 2430344 2431601 - 102019572 AGCD01009199 MODEL 8960373 pseudo LOC102005166 cactin pseudogene NW_004955433 1837660 1843410 - 102005166 AGCD01031371 MODEL 8831180 protein-coding Trim59 tripartite motif containing 59 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955448 10962181 10971948 - 102004658 AGCD01041507;GBCQ01126672;XM_005393122;XM_005393123;XM_013518598 XP_005393179;XP_005393180;XP_013374052 MODEL 8699800 pseudo LOC102014967 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4-like NW_004955817 12639 13506 - 102014967 AGCD01078405 MODEL 8794878 protein-coding LOC102017986 neutrophil gelatinase-associated lipocalin-like NW_004955419 46267 52358 - 102017986 AGCD01019560;AGCD01019561;GBDJ01026132;XM_005382913 XP_005382970 MODEL 8978840 protein-coding Fhdc1 FH2 domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN cilium assembly (ortholog); Golgi ribbon formation (ortholog); stress fiber assembly (ortholog); FOUND IN cilium (ortholog); cytoplasmic microtubule (ortholog); Golgi apparatus (ortholog) NW_004955471 7368086 7399431 + 102024000 AGCD01053147;AGCD01053148;GBBH01164761;GBDI01261606;XM_013522903 XP_013378357 MODEL 8909667 protein-coding Thnsl2 threonine synthase like 2 ENCODES a protein that exhibits phosphatase activity (ortholog); pyridoxal phosphate binding (ortholog); serine binding (ortholog) NW_004955424 526967 543603 - 102012450 AGCD01024178;GBDK01318952;XM_005385380 XP_005385437 MODEL 9061509 protein-coding Wbp4 WW domain binding protein 4 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, FEEDING DIFFICULTIES, FACIAL DYSMORPHISM, AND BRAIN ABNORMALITIES (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955404 51046245 51094245 + 102011395 AGCD01004543;AGCD01004544;AGCD01004545;AGCD01004546;AGCD01004547;GBBH01214258;GBCE01024729;XM_013516774;XM_013516775 XP_013372228;XP_013372229 MODEL 9025652 pseudo LOC102006967 transmembrane and TPR repeat-containing protein 3 pseudogene NW_004955582 159962 162499 - 102006967 AGCD01075747 MODEL 8729020 protein-coding Serpinf1 serpin family F member 1 INVOLVED IN cellular response to cobalt ion (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); adenoid cystic carcinoma (ortholog); Albuminuria (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); basement membrane (ortholog) NW_004955481 1414930 1426436 - 102015719 AGCD01056832;GBDK01110727;XM_005402604;XM_005402605 XP_005402661;XP_005402662 MODEL 8737826 protein-coding Alas1 5'-aminolevulinate synthase 1 ENCODES a protein that exhibits 5-aminolevulinate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); porphyria (ortholog); pulmonary hypertension (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955532 3810469 3823456 + 102026794 AGCD01070299;GBDF01085642;GBDK01069646;XM_005410344 XP_005410401 MODEL 8919179 protein-coding Tox3 TOX high mobility group box family member 3 ENCODES a protein that exhibits chromatin binding (ortholog); phosphoprotein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Cleft Lip with or without Cleft Palate, Nonsyndromic, 7 (ortholog); Liver Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955433 10328886 10426540 - 102022419 AGCD01031627;GBDI01013832;GBDI01325258;XM_005388284;XM_005388285 XP_005388341;XP_005388342 MODEL 8929837 protein-coding Hmgb3 high mobility group box 3 ENCODES a protein that exhibits DNA binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of B cell differentiation (ortholog); negative regulation of myeloid cell differentiation (ortholog); ASSOCIATED WITH syndromic microphthalmia 13 (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955498 6633540 6640393 + 102004496 AGCD01063121;AGCD01063122;GBCB01120270;XM_005406428;XM_005406429;XM_005406430 XP_005406485;XP_005406486;XP_005406487 MODEL 39133424 snrna U4 U4 spliceosomal RNA 8741095 protein-coding Adprh ADP-ribosylarginine hydrolase ENCODES a protein that exhibits ADP-ribosylarginine hydrolase activity (ortholog); magnesium ion binding (ortholog); potassium ion binding (ortholog); INVOLVED IN protein de-ADP-ribosylation (ortholog); ASSOCIATED WITH Carcinogenesis (ortholog); COVID-19 (ortholog); FOUND IN extracellular space (ortholog) NW_004955427 19271734 19280189 + 102018748 AGCD01027363;GBBH01164641;XM_005386445;XM_013515215 XP_005386502;XP_013370669 MODEL 8987903 protein-coding Hdac6 histone deacetylase 6 ENCODES a protein that exhibits acetylspermidine deacetylase activity (ortholog); alpha-tubulin binding (ortholog); ATPase inhibitor activity (ortholog); INVOLVED IN actin filament organization (ortholog); aggresome assembly (ortholog); axonal transport of mitochondrion (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autistic disorder (ortholog); cervix uteri carcinoma in situ (ortholog); cholangiocarcinoma (ortholog); FOUND IN aggresome (ortholog); axon (ortholog); caveola (ortholog) NW_004955543 348314 378391 + 102025047 AGCD01071576;AGCD01071577;AGCD01071578;AGCD01071579;GBDI01173523;XM_005411280;XM_005411281;XM_005411282;XM_005411283;XM_005411284;XM_013508165;XM_013508166 XP_005411337;XP_005411338;XP_005411339;XP_005411340;XP_005411341;XP_013363619;XP_013363620 MODEL 39134464 misc_rna 7SK 7SK RNA 8728101 protein-coding Apcs amyloid P component, serum ENCODES a protein that exhibits calcium ion binding (ortholog); complement component C1q complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); negative regulation of glycoprotein metabolic process (ortholog); ASSOCIATED WITH amyloidosis (ortholog); congestive heart failure (ortholog); coronary artery disease (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog) NW_004955468 11388154 11389259 + 102006894 AGCD01052129;GBDK01049342;XM_005400172 XP_005400229 MODEL 10108911 protein-coding Trnp1 TMF1 regulated nuclear protein 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); neural precursor cell proliferation (ortholog); regulation of cell cycle (ortholog); FOUND IN euchromatin (ortholog); nucleus (ortholog) NW_004955452 6335463 6341657 + 106149755 AGCD01044105;AGCD01044106;GBBH01186332;GBDF01207830;XM_013519741 XP_013375195 MODEL 8852069 protein-coding LOC102022366 bcl-2-like protein 2 NW_004955409 37012376 37017785 - 102022366 AGCD01010488;GBDK01240448;XM_005377084;XM_005377085 XP_005377141;XP_005377142 MODEL 8823190 protein-coding LOC102005927 olfactory receptor 52A5-like NW_004955414 21125400 21126350 - 102005927 AGCD01015407;XM_005380494 XP_005380551 MODEL 8848615 protein-coding Psrc1 proline and serine rich coiled-coil 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); mitotic metaphase chromosome alignment (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955435 12697179 12702021 - 102025719 AGCD01033162;GBDK01264620;XM_013516446;XM_013516447;XM_013516448;XM_013516449;XM_013516450;XM_013516451;XM_013516452;XM_013516453 XP_013371900;XP_013371901;XP_013371902;XP_013371903;XP_013371904;XP_013371905;XP_013371906;XP_013371907 MODEL 8874236 protein-coding Dnah2 dynein axonemal heavy chain 2 INVOLVED IN cilium movement (ortholog); cilium-dependent cell motility (ortholog); inner dynein arm assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Laterality Defects, Autosomal Dominant (ortholog); primary microcephaly (ortholog); FOUND IN axonemal dynein complex (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955467 9107089 9210941 - 102003107 AGCD01051484;GBDI01187193;XM_005399455;XM_005399456;XM_005399457;XM_005399458 XP_005399512;XP_005399513;XP_005399514;XP_005399515 MODEL 8941324 protein-coding Bhlha15 basic helix-loop-helix family member a15 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell differentiation (ortholog); cell maturation (ortholog); FOUND IN nucleus (ortholog) NW_004955460 14103053 14106714 + 102028274 AGCD01048738;GBDF01053345;XM_005397913;XR_263065 XP_005397970 MODEL 8727140 protein-coding Carm1 coactivator associated arginine methyltransferase 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone H3R17 methyltransferase activity (ortholog); histone H3R2 methyltransferase activity (ortholog); INVOLVED IN endochondral bone morphogenesis (ortholog); estrogen receptor signaling pathway (ortholog); gene expression (ortholog); PARTICIPATES IN androgen signaling pathway; estrogen signaling pathway; histone modification pathway; ASSOCIATED WITH asthma (ortholog); estrogen-receptor positive breast cancer (ortholog); hepatocellular adenoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear replication fork (ortholog) NW_004955495 1983599 2002174 + 102028553 AGCD01061743;AGCD01061744;GBDF01009004;XM_005406133 XP_005406190 MODEL 8871572 protein-coding Pde6a phosphodiesterase 6A INVOLVED IN photoreceptor cell maintenance (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Leber congenital amaurosis (ortholog) NW_004955415 4556636 4637070 + 102020108 AGCD01015974;AGCD01015975;AGCD01015976;GBDI01362005;XM_005380591;XM_005380592 XP_005380648;XP_005380649 MODEL 8957734 protein-coding Ttc23 tetratricopeptide repeat domain 23 INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH orofaciodigital syndrome (ortholog); FOUND IN cilium (ortholog) NW_004955416 26583219 26664519 - 102030420 AGCD01017599;AGCD01017600;GBCB01058906;XM_005381620;XM_005381621;XM_005381622;XM_005381623;XM_005381625;XM_005381626;XM_013512540;XM_013512541 XP_005381677;XP_005381678;XP_005381679;XP_005381680;XP_005381682;XP_005381683;XP_013367994;XP_013367995 MODEL 39132298 rrna 5S_rRNA 5S ribosomal RNA 9050595 protein-coding Thoc1 THO complex 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 86 (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955402 9675211 9708045 + 102018246 AGCD01000228;GBDI01007496;GBDJ01229393;XM_013519833 XP_013375287 MODEL 39132499 snrna U6 U6 spliceosomal RNA 8908110 protein-coding Gcna germ cell nuclear acidic peptidase ENCODES a protein that exhibits SUMO polymer binding (ortholog); INVOLVED IN protein-DNA covalent cross-linking repair (ortholog); ASSOCIATED WITH azoospermia (ortholog); spermatogenic failure 3 (ortholog); X-linked spermatogenic failure 4 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PML body (ortholog) NW_004955475 11111151 11145474 + 102029073 AGCD01055142;AGCD01055143;GBDF01007488;XM_005401708 XP_005401765 MODEL 9037669 protein-coding LOC102012347 uncharacterized LOC102012347 NW_004955508 3322424 3325128 + 102012347 AGCD01065806;GBCQ01193228;XM_005407736 XP_005407793 MODEL 9019833 protein-coding Intu inturned planar cell polarity protein ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN cilium assembly (ortholog); embryonic digit morphogenesis (ortholog); hair follicle morphogenesis (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); genetic disease (ortholog); Growth Disorders (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955428 13670756 13743030 - 102008243 AGCD01027960;AGCD01027961;AGCD01027962;GBBH01048791;XM_005386749;XM_013515336;XM_013515337 XP_005386806;XP_013370790;XP_013370791 MODEL 39132967 snrna U1 U1 spliceosomal RNA 8748754 protein-coding Fam217b family with sequence similarity 217 member B FOUND IN nucleoplasm (ortholog) NW_004955528 3796270 3802409 - 102007588 AGCD01069610;GBDK01396344;XM_005410043;XM_013507502;XM_013507503;XM_013507504;XM_013507505;XR_001231992 XP_005410100;XP_013362956;XP_013362957;XP_013362958;XP_013362959 MODEL 8894373 protein-coding B4galt5 beta-1,4-galactosyltransferase 5 ENCODES a protein that exhibits N-acetyllactosamine synthase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); ganglioside biosynthetic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); multiple sclerosis (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955445 8471684 8559672 + 102004759 AGCD01039595;AGCD01039596;AGCD01039597;AGCD01039598;AGCD01039599;AGCD01039600;AGCD01039601;AGCD01039602;AGCD01039603;GBBH01033957;XM_005392328;XM_013518294;XM_013518295 XP_005392385;XP_013373748;XP_013373749 MODEL 8797368 protein-coding LOC102003434 olfactory receptor 51M1-like NW_004955414 21278585 21279689 + 102003434 AGCD01015411;XM_013511772 XP_013367226 MODEL 10381409 ncrna LOC106150062 uncharacterized LOC106150062 NW_004955463 6666855 6685480 - 106150062 AGCD01049689;AGCD01049690;AGCD01049691;XR_001236634 MODEL 39133893 misc_rna 7SK 7SK RNA 9019917 protein-coding Kiaa1614 KIAA1614 ortholog NW_004955406 20005261 20038783 + 102012496 AGCD01006096;GBBH01197770;GBDF01155976;XM_005374988 XP_005375045 MODEL 8880388 protein-coding Acvr2b activin A receptor type 2B ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type II (ortholog); growth factor binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH Anthracycline-induced Cardiotoxicity (ortholog); Brain Hypoxia-Ischemia (ortholog); Kidney Reperfusion Injury (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955427 25438652 25467360 - 102005280 AGCD01027540;GBDF01195103;GBDK01307517;XM_005386590;XM_005386591 XP_005386647;XP_005386648 MODEL 39131672 rrna 5S_rRNA 5S ribosomal RNA 8772446 ncrna LOC102024095 uncharacterized LOC102024095 NW_004955460 10079307 10081202 + 102024095 AGCD01048572;GBDF01161695;XR_263045 MODEL 9009386 pseudo LOC102005168 uncharacterized LOC102005168 NW_004955434 10798324 10816183 - 102005168 AGCD01032363;AGCD01032364;AGCD01032365 MODEL 8834059 protein-coding Rep15 RAB15 effector protein INVOLVED IN receptor recycling (ortholog); transferrin transport (ortholog); FOUND IN endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog); recycling endosome (ortholog) NW_004955505 7189592 7190928 - 102021262 AGCD01065201;GBDJ01171786;XM_005407162 XP_005407219 MODEL 9034662 protein-coding Plcd1 phospholipase C delta 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to calcium ion (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH alopecia (ortholog); Alzheimer's disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial membrane (ortholog) NW_004955421 4856366 4880309 - 102012763 AGCD01021703;AGCD01021704;GBCE01115444;XM_005383723;XM_005383724;XM_005383725 XP_005383780;XP_005383781;XP_005383782 MODEL 8808123 protein-coding LOC102010752 olfactory receptor 10V1-like NW_004955580 1278611 1279549 + 102010752 AGCD01075652;GBBH01028735;XM_005414226 XP_005414283 MODEL 8871429 pseudo LOC102017994 olfactory receptor 7E24-like NW_004955495 730711 731673 - 102017994 AGCD01061651 MODEL 8746500 pseudo LOC102019886 centrosome and spindle pole-associated protein 1-like NW_004955406 12062313 12087255 + 102019886 AGCD01005906 MODEL 8941932 protein-coding Fhip1a FHF complex subunit HOOK interacting protein 1A INVOLVED IN protein localization to perinuclear region of cytoplasm (ortholog); ASSOCIATED WITH COVID-19 (ortholog); High Myopia (ortholog) NW_004955471 5985150 6229720 + 102024555 AGCD01053116;AGCD01053117;AGCD01053118;AGCD01053119;AGCD01053120;AGCD01053121;AGCD01053122;GBCB01023762;XM_013522889;XM_013522890;XM_013522891;XM_013522892;XM_013522893 XP_013378343;XP_013378344;XP_013378345;XP_013378346;XP_013378347 MODEL 8772718 protein-coding Atp5f1e ATP synthase F1 subunit epsilon ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Fluoride Poisoning (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 3 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955445 563642 567865 + 102018537 AGCD01039320;GBDK01015787;XM_005392211 XP_005392268 MODEL 8916132 protein-coding Tox4 TOX high mobility group box family member 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); PTW/PP1 phosphatase complex (ortholog) NW_004955550 2195710 2209729 + 102013344 AGCD01072611;GBDF01045487;XM_005412118;XM_013508582 XP_005412175;XP_013364036 MODEL 8836376 protein-coding Cfd complement factor D ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, alternative pathway (ortholog); Notch signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); arthus reaction (ortholog); asbestosis (ortholog); FOUND IN extracellular space (ortholog) NW_004955495 6955612 6961317 - 102016395 AGCD01062104;AGCD01062105;GBDI01121981;XM_005406171 XP_005406228 MODEL 8942660 pseudo LOC102021368 ferritin light chain pseudogene NW_004955500 1650018 1650857 + 102021368 AGCD01063669 MODEL 8821092 protein-coding Hmgb4 high mobility group box 4 NW_004955452 12013304 12014058 + 102009141 AGCD01044345;GBDF01010338;XM_005395115 XP_005395172 MODEL 8869535 protein-coding LOC102009964 vegetative cell wall protein gp1-like NW_004955495 4922998 4925566 + 102009964 AGCD01061964;GBCQ01088688;XM_005406155 XP_005406212 MODEL 8946846 protein-coding Adprhl1 ADP-ribosylhydrolase like 1 NW_004955404 494185 512295 + 102005215 AGCD01003202;GBCE01042504;XM_005373948;XM_005373949 XP_005374005;XP_005374006 MODEL 39134465 misc_rna 7SK 7SK RNA 8912451 trna trnQ(ttg) tRNA-Gln MT 3745 3815 - 15822236 8968584 protein-coding Asb16 ankyrin repeat and SOCS box containing 16 NW_004955451 17265904 17273289 + 102006415 AGCD01043731;AGCD01043732;AGCD01043733;GBCB01003710;XM_013519058 XP_013374512 MODEL 39134157 misc_rna 7SK 7SK RNA 8774436 pseudo LOC102005928 60S ribosomal protein L30-like NW_004955475 4519787 4520219 + 102005928 AGCD01054881;XR_263612 MODEL 8845562 protein-coding Trim6 tripartite motif containing 6 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-beta (ortholog); cellular response to virus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955414 21495593 21513703 + 102008616 AGCD01015422;GBDF01054312;XM_005380095;XM_013511994;XM_013511995;XM_013511997;XM_013511998;XM_013511999 XP_005380152;XP_013367448;XP_013367449;XP_013367451;XP_013367452;XP_013367453 MODEL 8822172 protein-coding Pstk phosphoseryl-tRNA kinase ENCODES a protein that exhibits L-seryl-tRNA(Sec) kinase activity (ortholog); tRNA binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog) NW_004955477 1147596 1157755 + 102024458 AGCD01055503;GBDF01039234;XM_005401952 XP_005402009 MODEL 10214953 ncrna LOC106147084 uncharacterized LOC106147084 NW_004955402 10998277 11036252 + 106147084 AGCD01000295;XR_001231833 MODEL 9012636 protein-coding Serpinf2 serpin family F member 2 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); collagen fibril organization (ortholog); maintenance of blood vessel diameter homeostasis by renin-angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alpha-2-plasmin inhibitor deficiency (ortholog); coronary artery disease (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); fibrinogen complex (ortholog) NW_004955481 1441262 1449078 - 102016267 AGCD01056832;GBCQ01033980;XM_005402606;XM_005402607 XP_005402663;XP_005402664 MODEL 8850365 protein-coding Alas2 5'-aminolevulinate synthase 2 ENCODES a protein that exhibits 5-aminolevulinate synthase activity (ortholog); coenzyme A binding (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); heme B biosynthetic process (ortholog); heme biosynthetic process (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); anemia (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955475 2362368 2382680 - 102026315 AGCD01054801;GBBH01034987;XM_005401537;XM_005401538 XP_005401594;XP_005401595 MODEL 39133271 snrna U4 U4 spliceosomal RNA 39132969 snrna U1 U1 spliceosomal RNA 8749193 protein-coding Hdac7 histone deacetylase 7 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN cell-cell junction assembly (ortholog); cellular response to mechanical stimulus (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; hypoxia inducible factor pathway; ASSOCIATED WITH alopecia areata (ortholog); colorectal cancer (ortholog); Huntington's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955500 6692656 6707453 - 102018001 AGCD01063891;GBDK01016156;XM_005406612;XM_005406616 XP_005406669;XP_005406673 MODEL 8744226 protein-coding Invs inversin INVOLVED IN animal organ development (ortholog); embryonic heart tube left/right pattern formation (ortholog); epithelial cilium movement involved in determination of left/right asymmetry (ortholog); ASSOCIATED WITH cholestasis (ortholog); cystic kidney disease (ortholog); fundus dystrophy (ortholog); FOUND IN ciliary base (ortholog); ciliary inversin compartment (ortholog); cilium (ortholog) NW_004955419 25445404 25584244 - 102011666 AGCD01020385;AGCD01020386;AGCD01020387;AGCD01020388;GBDF01113701;XM_005382808;XM_005382810;XM_013513189 XP_005382865;XP_005382867;XP_013368643 MODEL 8954226 pseudo LOC102003435 olfactory receptor 2AG2-like NW_004955414 22564831 22565788 - 102003435 AGCD01015463 MODEL 8845801 pseudo LOC102017213 ubiquitin-conjugating enzyme E2 L3-like NW_004955413 9498850 9499337 + 102017213 AGCD01013907 MODEL 10211853 protein-coding LOC106150063 uncharacterized LOC106150063 NW_004955463 13159649 13333530 - 106150063 AGCD01049862;AGCD01049863;AGCD01049864;GBDI01086240;XM_013521499;XR_001236635;XR_001236636 XP_013376953 MODEL 8773316 protein-coding Wdcp WD repeat and coiled coil containing ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN protein complex oligomerization (ortholog) NW_004955469 6236653 6261753 - 102023140 AGCD01052374;AGCD01052375;GBCE01018761;XM_005400370;XM_005400371 XP_005400427;XP_005400428 MODEL 8880886 protein-coding Acvrl1 activin A receptor like type 1 ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type I (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); artery development (ortholog); blood circulation (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH adenosine deaminase deficiency (ortholog); arteriovenous malformation (ortholog); arteriovenous malformations of the brain (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955547 2278548 2293865 + 102028803 AGCD01072266;GBDK01001484;XM_005411918;XM_005411919;XM_013508491;XM_013508492;XM_013508494;XM_013508495 XP_005411975;XP_005411976;XP_013363945;XP_013363946;XP_013363948;XP_013363949 MODEL 39131673 rrna 5S_rRNA 5S ribosomal RNA 8965219 protein-coding Bhlha9 basic helix-loop-helix family member a9 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); ASSOCIATED WITH Complex Camptosynpolydactyly (ortholog); genetic disease (ortholog); Mesoaxial Synostotic Syndactyly with Phalangeal Reduction (ortholog); FOUND IN cytoplasm (ortholog) NW_004955481 2769023 2770269 + 102007769 AGCD01056883;AGCD01056884;XM_005402922 XP_005402979 MODEL 8907210 protein-coding Repin1 replication initiator 1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); regulation of fatty acid transport (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); lipid droplet (ortholog) NW_004955491 4973192 4977970 + 102018610 AGCD01060466;GBDF01002881;XM_005404768;XM_005404772;XM_005404774;XM_013504594 XP_005404825;XP_005404829;XP_005404831;XP_013360048 MODEL 8808916 protein-coding Dnah3 dynein axonemal heavy chain 3 INVOLVED IN inner dynein arm assembly (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH intellectual disability (ortholog); prostate cancer (ortholog); spermatogenic failure 18 (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog) NW_004955493 211458 363988 - 102005720 AGCD01060843;AGCD01060844;AGCD01060845;AGCD01060846;AGCD01060847;GBBH01117267;XM_013504828 XP_013360282 MODEL 39132300 rrna 5S_rRNA 5S ribosomal RNA 9064864 protein-coding Asb17 ankyrin repeat and SOCS box containing 17 INVOLVED IN protein polyubiquitination (ortholog); FOUND IN apical ectoplasmic specialization (ortholog) NW_004955423 17072213 17089558 + 102024474 AGCD01023845;GBDF01048405;XM_005385225 XP_005385282 MODEL 8788277 protein-coding Carmil1 capping protein regulator and myosin 1 linker 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN actin filament network formation (ortholog); barbed-end actin filament uncapping (ortholog); cell migration (ortholog); ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); filamentous actin (ortholog) NW_004955483 1463856 1770798 - 102003768 AGCD01057646;AGCD01057647;AGCD01057648;AGCD01057649;AGCD01057650;AGCD01057651;GBDF01163343;XM_005403347;XM_013503829;XM_013503830;XM_013503831;XM_013503832 XP_005403404;XP_013359283;XP_013359284;XP_013359285;XP_013359286 MODEL 8753777 protein-coding Gorasp1 golgi reassembly stacking protein 1 INVOLVED IN establishment of protein localization to plasma membrane (ortholog); Golgi organization (ortholog); Golgi ribbon formation (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955427 24862253 24873710 + 102027553 AGCD01027524;AGCD01027525;GBDF01050822;XM_005386568;XM_013515076;XM_013515077 XP_005386625;XP_013370530;XP_013370531 MODEL 8900542 protein-coding Gcnt1 glucosaminyl (N-acetyl) transferase 1 ENCODES a protein that exhibits beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN cell adhesion molecule production (ortholog); glycoprotein biosynthetic process (ortholog); kidney morphogenesis (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN extracellular space (ortholog); Golgi cisterna (ortholog); nuclear speck (ortholog) NW_004955512 2827321 2857777 - 102028781 AGCD01066690;GBBH01117760;XM_005408306;XM_005408307 XP_005408363;XP_005408364 MODEL 9012684 protein-coding Thoc2 THO complex 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); cell morphogenesis (ortholog); generation of neurons (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH arthrogryposis multiplex congenita-7, X-linked (ortholog); genetic disease (ortholog); immunodeficiency 127 (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955473 11029860 11143493 + 102018825 AGCD01054129;AGCD01054130;GBCE01187645;XM_005401279;XM_005401282;XM_005401283;XM_005401284;XM_013523054;XM_013523055;XM_013523056;XM_013523057;XM_013523058 XP_005401336;XP_005401339;XP_005401340;XP_005401341;XP_013378508;XP_013378509;XP_013378510;XP_013378511;XP_013378512 MODEL 8983305 protein-coding LOC102022372 chromosome unknown open reading frame, human C6orf120 NW_004955411 3927722 3929720 - 102022372 AGCD01011562;GBDK01232050;XM_005377643;XM_005377644;XM_005377645 XP_005377700;XP_005377701;XP_005377702 MODEL 8903774 protein-coding Ttc23l tetratricopeptide repeat domain 23 like NW_004955426 19985179 20029902 + 102030550 AGCD01026560;GBDJ01376678;XM_005386177;XM_005386178;XM_005386181;XM_013514964;XM_013514965;XM_013514966;XM_013514967;XM_013514968;XR_001234319 XP_005386234;XP_005386235;XP_005386238;XP_013370418;XP_013370419;XP_013370420;XP_013370421;XP_013370422 MODEL 9010659 protein-coding Fam219a family with sequence similarity 219 member A NW_004955472 1668400 1718194 + 102025568 AGCD01053409;GBDF01044769;XM_005401063;XM_005401064;XM_005401065;XM_005401066;XM_005401067;XM_005401068;XM_005401069;XM_005401070;XM_005401071;XM_005401072;XM_005401073;XM_005401074;XM_013522972;XM_013522974;XM_013522975;XM_013522976;XM_013522977;XM_013522979 XP_005401120;XP_005401121;XP_005401122;XP_005401123;XP_005401124;XP_005401125;XP_005401126;XP_005401127;XP_005401128;XP_005401129;XP_005401130;XP_005401131;XP_013378426;XP_013378428;XP_013378429;XP_013378430;XP_013378431;XP_013378433 MODEL 9041833 protein-coding Atp5if1 ATP synthase inhibitory factor subunit 1 ENCODES a protein that exhibits angiostatin binding (ortholog); ATPase binding (ortholog); ATPase inhibitor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); heme biosynthetic process (ortholog); mitochondrial depolarization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); mitochondrion (ortholog) NW_004955452 7372917 7375072 + 102013899 AGCD01044147;GBDF01007352;XM_005394945 XP_005395002 MODEL 9016803 protein-coding LOC102019573 olfactory receptor 6C6-like NW_004955458 2670696 2671655 - 102019573 AGCD01047240;XM_005397499 XP_005397556 MODEL 8810629 protein-coding B4galt6 beta-1,4-galactosyltransferase 6 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); ganglioside biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); multiple sclerosis (ortholog) NW_004955402 18945013 19024132 - 102018666 AGCD01000543;AGCD01000544;GBCE01061577;GBCE01087318;XM_005372744;XM_013507100;XM_013507170;XM_013507213;XM_013507247 XP_005372801;XP_013362554;XP_013362624;XP_013362667;XP_013362701 MODEL 39132971 snrna U1 U1 spliceosomal RNA 8728941 protein-coding Kiaa1671 KIAA1671 ortholog FOUND IN cilium (ortholog) NW_004955455 53731 193113 - 102010024 AGCD01045552;AGCD01045553;GBDF01281582;XM_005396132;XM_013520403;XM_013520404;XM_013520405;XM_013520406 XP_005396189;XP_013375857;XP_013375858;XP_013375859;XP_013375860 MODEL 8849575 protein-coding Adprm ADP-ribose/CDP-alcohol diphosphatase, manganese dependent NW_004955467 6505957 6519823 - 102030403 AGCD01051416;GBCQ01154845;XM_005399358;XM_005399359 XP_005399415;XP_005399416 MODEL 9004045 protein-coding Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase ENCODES a protein that exhibits carboxylic acid binding (ortholog); fatty-acyl-CoA binding (ortholog); hydroxymethylglutaryl-CoA lyase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); ketone body biosynthetic process (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-hydroxy-3-methylglutaryl-CoA lyase deficiency (ortholog); amino acid metabolic disorder (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) NW_004955452 3720103 3734730 - 102018794 AGCD01043936;GBDF01155386;XM_005394773;XM_005394774 XP_005394830;XP_005394831 MODEL 8776751 pseudo LOC102024097 transcription factor BTF3 homolog 4 pseudogene NW_004955460 13187620 13196978 + 102024097 AGCD01048674 MODEL 39132504 snrna U6 U6 spliceosomal RNA 8806576 protein-coding LOC102012348 ankyrin repeat domain-containing protein 26-like NW_004955429 6598602 6603032 - 102012348 AGCD01028554;XM_013515351 XP_013370805 MODEL 9013193 protein-coding Pde6b phosphodiesterase 6B INVOLVED IN detection of light stimulus (ortholog); entrainment of circadian clock by photoperiod (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH Animal Disease Models (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 1 (ortholog); FOUND IN photoreceptor outer segment (ortholog) NW_004955514 234972 279420 + 102006266 AGCD01067002;AGCD01067003;AGCD01067004;AGCD01067005;GBDF01265565;XM_005408671 XP_005408728 MODEL 8805897 protein-coding Wdfy1 WD repeat and FYVE domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); INVOLVED IN positive regulation of toll-like receptor 3 signaling pathway (ortholog); positive regulation of toll-like receptor 4 signaling pathway (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); nucleus (ortholog) NW_004955453 10101576 10148205 + 102020198 AGCD01044782;GBDF01044991;XM_005395485 XP_005395542 MODEL 8814934 protein-coding Trim62 tripartite motif containing 62 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of viral transcription (ortholog); FOUND IN cytoplasm (ortholog) NW_004955452 11348001 11377413 - 102006865 AGCD01044335;GBCB01025292;XM_005395108 XP_005395165 MODEL 8805108 protein-coding Fhip1b FHF complex subunit HOOK interacting protein 1B INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN FHF complex (ortholog) NW_004955414 21954103 21977877 - 102015503 AGCD01015438;GBBH01102313;XM_005380117;XM_005380119;XM_005380121;XM_013512031 XP_005380174;XP_005380176;XP_005380178;XP_013367485 MODEL 8717346 protein-coding Apeh acylaminoacyl-peptide hydrolase ENCODES a protein that exhibits identical protein binding (ortholog); omega peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); proteolysis (ortholog); FOUND IN cytosol (ortholog) NW_004955532 1580473 1590274 + 102015239 AGCD01070195;GBDF01119664;XM_005410206 XP_005410263 MODEL 8868064 protein-coding Alb albumin ENCODES a protein that exhibits DNA binding (ortholog); enterobactin binding (ortholog); enzyme binding (ortholog); INVOLVED IN bilirubin transport (ortholog); cellular response to calcium ion starvation (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; organophosphate response pathway; ASSOCIATED WITH suppurative otitis media; Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); FOUND IN extracellular space; basement membrane (ortholog); cytoplasm (ortholog) NW_004955447 9327 21212 - 102017521 AGCD01040426;AGCD01040427;AGCD01040428;AGCD01040429;AGCD01040430;GBCB01023892;GBDI01069567;XM_005392761 XP_005392818 MODEL 8894917 protein-coding Cfdp1 craniofacial development protein 1 INVOLVED IN cell adhesion (ortholog); negative regulation of fibroblast apoptotic process (ortholog); regulation of cell population proliferation (ortholog) NW_004955484 2085372 2203177 + 102021558 AGCD01058087;AGCD01058088;AGCD01058089;AGCD01058090;AGCD01058091;AGCD01058092;AGCD01058093;GBDF01047807;XM_005403448;XM_005403449 XP_005403505;XP_005403506 MODEL 39133894 misc_rna 7SK 7SK RNA 8929991 pseudo LOC102009965 high mobility group nucleosome-binding domain-containing protein 3 pseudogene NW_004955497 1469748 1473082 - 102009965 AGCD01062462;XM_005406365 MODEL 8765971 ncrna LOC102021370 uncharacterized LOC102021370 NW_004955426 17761060 17765467 - 102021370 AGCD01026506;GBDK01047985;XR_261199 MODEL 39134466 misc_rna 7SK 7SK RNA 8830438 trna trnR(tcg) tRNA-Arg MT 9812 9879 + 15822210 39134158 misc_rna 7SK 7SK RNA 9064500 protein-coding Hdac8 histone deacetylase 8 ENCODES a protein that exhibits chromatin binding (ortholog); deacetylase activity (ortholog); histone deacetylase activity (ortholog); INVOLVED IN cellular response to forskolin (ortholog); cellular response to trichostatin A (ortholog); mitotic sister chromatid cohesion (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH amphetamine abuse (ortholog); atrial heart septal defect (ortholog); Cardiomegaly (ortholog) NW_004955475 11748502 12012884 - 102014041 AGCD01055169;AGCD01055170;AGCD01055171;AGCD01055172;AGCD01055173;AGCD01055174;AGCD01055175;AGCD01055176;AGCD01055177;GBDI01054107;XM_005401688 XP_005401745 MODEL 8913957 pseudo LOC102005933 LYR motif-containing protein 2 pseudogene NW_004955418 22822234 22822422 + 102005933 AGCD01019292 MODEL 8824995 protein-coding Plcd3 phospholipase C delta 3 INVOLVED IN angiogenesis (ortholog); labyrinthine layer blood vessel development (ortholog); regulation of cell population proliferation (ortholog); PARTICIPATES IN inositol metabolic pathway NW_004955451 17822345 17827848 - 102023864 AGCD01043774;GBBH01230083;GBCE01115432;XM_005394564 XP_005394621 MODEL 8837595 pseudo LOC102017996 40S ribosomal protein S15 pseudogene NW_004955423 7792117 7792604 - 102017996 AGCD01023611 MODEL 8831512 protein-coding LOC102017219 ankyrin repeat domain-containing protein 49 NW_004955414 98384 104654 - 102017219 AGCD01014701;GBDK01229818;XM_005379677 XP_005379734 MODEL 8885878 gene LOC102019887 immunoglobulin omega chain-like NW_004955455 6452637 6453149 + 102019887 AGCD01045796;XM_005396353 MODEL 8826727 protein-coding Serping1 serpin family G member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of complement activation, lectin pathway (ortholog); PARTICIPATES IN coagulation cascade pathway; kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular space (ortholog) NW_004955511 2545337 2557850 + 102019092 AGCD01066414;GBCQ01008778;GBDF01198841;XM_013506484 XP_013361938 MODEL 8937648 protein-coding LOC102014969 uncharacterized LOC102014969 NW_004955451 12601474 12613051 + 102014969 AGCD01043414;GBDF01179312;XM_013519067 XP_013374521 MODEL 8756380 protein-coding Pstpip1 proline-serine-threonine phosphatase interacting protein 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); protein phosphatase binding (ortholog); ASSOCIATED WITH acne (ortholog); autoinflammatory syndrome with cytopenia, hyperzincemia, and hypercalprotectinemia (ortholog); Behcet's disease (ortholog); FOUND IN actomyosin contractile ring (ortholog); cleavage furrow (ortholog); cytosol (ortholog) NW_004955450 1876553 1908269 + 102019551 AGCD01042371;GBDK01231269;XM_005393478;XM_005393479;XM_005393481;XM_013519024 XP_005393535;XP_005393536;XP_005393538;XP_013374478 MODEL 8824573 protein-coding LOC102006973 translational activator GCN1-like NW_004956042 4662 8692 - 102006973 AGCD01078929;XM_005415165 XP_005415222 MODEL 39132304 rrna 5S_rRNA 5S ribosomal RNA 8899859 protein-coding Dnah5 dynein axonemal heavy chain 5 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); Ciliary Motility Disorders (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal dynein complex (ortholog) NW_004955426 3105631 3406587 - 102007676 AGCD01026065;AGCD01026066;AGCD01026067;AGCD01026068;AGCD01026069;AGCD01026070;AGCD01026071;AGCD01026072;AGCD01026073;AGCD01026074;AGCD01026075;AGCD01026076;AGCD01026077;AGCD01026078;AGCD01026079;AGCD01026080;GBDI01083953;XM_005386122;XM_013514981 XP_005386179;XP_013370435 MODEL 8924440 protein-coding Tp53 tumor protein p53 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP-dependent DNA/DNA annealing activity (ortholog); chromatin binding (ortholog); INVOLVED IN positive regulation of outer hair cell apoptotic process; apoptotic signaling pathway (ortholog); autophagy (ortholog); PARTICIPATES IN altered p53 signaling pathway; endometrial cancer pathway; lung non-small cell carcinoma pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955467 9241391 9256716 + 102005455 AGCD01051484;AGCD01051485;GBCQ01124524;XM_005399463;XM_005399464 XP_005399520;XP_005399521 MODEL 9044923 protein-coding Dynll2 dynein light chain LC8-type 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); scaffold protein binding (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic dynein complex (ortholog) NW_004955451 4929186 4936027 - 102003609 AGCD01043149;GBDJ01011660;XM_005394039 XP_005394096 MODEL 8950630 ncrna LOC102005172 uncharacterized LOC102005172 NW_004955436 16334399 16358588 + 102005172 AGCD01033914;AGCD01033915;GBDK01148627;XR_001234980 MODEL 8828143 protein-coding Gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type ENCODES a protein that exhibits acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN intestinal absorption (ortholog); kidney morphogenesis (ortholog); tissue morphogenesis (ortholog) NW_004955450 15204502 15211747 - 102012263 AGCD01042785;GBDF01013134;XM_005393829;XM_005393830;XM_005393831;XM_013519008 XP_005393886;XP_005393887;XP_005393888;XP_013374462 MODEL 8897347 protein-coding Ip6k1 inositol hexakisphosphate kinase 1 ENCODES a protein that exhibits inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955532 1625298 1644973 - 102018435 AGCD01070196;GBCE01052322;XM_013507604;XM_013507605;XM_013507606 XP_013363058;XP_013363059;XP_013363060 MODEL 8740818 pseudo LOC102003437 probable asparagine--tRNA ligase, mitochondrial pseudogene NW_004955414 18585477 18586305 + 102003437 AGCD01015285 MODEL 8903285 protein-coding Atp5mc1 ATP synthase membrane subunit c locus 1 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); proton channel activity (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); cold acclimation (ortholog); negative regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cation channel complex (ortholog); distal axon (ortholog); mitochondrion (ortholog) NW_004955451 12426309 12429460 - 102029813 AGCD01043393;AGCD01043394;GBCE01002341;XM_005394227;XM_005394228 XP_005394284;XP_005394285 MODEL 9064024 protein-coding LOC102021376 LIM zinc-binding domain-containing Nebulette-like NW_004955429 7358758 7369645 + 102021376 AGCD01028590;AGCD01028591;GBBH01110887;GBCQ01178173;XM_005386937 XP_005386994 MODEL 9000631 trna trnS1(gct) tRNA-Ser MT 11621 11681 + 15822231 10301986 ncrna LOC106147085 uncharacterized LOC106147085 NW_004955517 1045333 1049530 + 106147085 AGCD01067588;GBCE01129533;XR_001231820 MODEL 8950825 protein-coding Bhlhe22 basic helix-loop-helix family member e22 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); central nervous system projection neuron axonogenesis (ortholog); cerebral cortex regionalization (ortholog); FOUND IN nucleus (ortholog) NW_004955444 14458307 14460441 - 102014620 AGCD01039122;GBDK01059279;XM_013518126 XP_013373580 MODEL 39134159 misc_rna 7SK 7SK RNA 9060390 protein-coding Acy1 aminoacylase 1 ENCODES a protein that exhibits aminoacylase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Aminoacylase 1 Deficiency (ortholog); pre-malignant neoplasm (ortholog); renal cell carcinoma (ortholog); FOUND IN extracellular exosome (ortholog) NW_004955532 3627314 3631799 + 102025286 AGCD01070292;GBCE01096162;GBDI01083282;XM_005410340 XP_005410397 MODEL 39133272 snrna U4 U4 spliceosomal RNA 8967496 ncrna LOC102012357 uncharacterized LOC102012357 NW_004955436 8984095 9017211 + 102012357 AGCD01033755;GBDF01158995;XR_261779;XR_261780 MODEL 8865523 protein-coding LOC102005934 olfactory receptor 1L3-like NW_004955419 5269472 5270444 - 102005934 AGCD01019797;XM_013513102 XP_013368556 MODEL 8773572 ncrna LOC102017220 uncharacterized LOC102017220 NW_004955469 8942157 8947968 - 102017220 AGCD01052483;AGCD01052484;GBDF01078798;XR_001236992;XR_263441 MODEL 8704109 protein-coding Gorasp2 golgi reassembly stacking protein 2 INVOLVED IN establishment of protein localization to plasma membrane (ortholog); Golgi organization (ortholog); response to endoplasmic reticulum stress (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) NW_004955449 3857097 3886100 - 102022345 AGCD01041868;AGCD01041869;GBDI01078948;XM_005393241 XP_005393298 MODEL 8832144 protein-coding Carmil2 capping protein regulator and myosin 1 linker 2 ENCODES a protein that exhibits phospholipid binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin filament network formation (ortholog); establishment of protein localization (ortholog); establishment or maintenance of cell polarity (ortholog); ASSOCIATED WITH combined immunodeficiency (ortholog); combined T cell and B cell immunodeficiency (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell leading edge (ortholog); cell-cell junction (ortholog) NW_004955484 9025409 9037942 - 102008110 AGCD01058403;AGCD01058404;GBDJ01349439;GBDJ01349447;XM_013503950;XM_013503951;XM_013503952;XM_013503953 XP_013359404;XP_013359405;XP_013359406;XP_013359407 MODEL 9060687 protein-coding Thoc3 THO complex 3 INVOLVED IN mRNA export from nucleus (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); THO complex part of transcription export complex (ortholog) NW_004955408 28467540 28480613 - 102008381 AGCD01008713;GBDK01394321;XM_005376367 XP_005376424 MODEL 8877918 protein-coding LOC102010753 putative uncharacterized protein ZNRD1-AS1 NW_004955583 186389 190965 - 102010753 AGCD01075800;AGCD01075801;GBDI01025273;XM_013509840 XP_013365294 MODEL 8923083 protein-coding LOC102022374 caspase-4 NW_004955412 7744809 7814990 - 102022374 AGCD01012703;AGCD01012704;AGCD01012705;GBDI01278598;XM_005378000;XM_005378001;XM_005378002;XM_005378004;XM_013511166;XM_013511167;XM_013511168 XP_005378057;XP_005378058;XP_005378059;XP_005378061;XP_013366620;XP_013366621;XP_013366622 MODEL 8725192 protein-coding Ttc24 tetratricopeptide repeat domain 24 NW_004955545 2670629 2679093 + 102003907 AGCD01071915;GBBH01143366;XM_005415343;XM_013508312;XM_013508313;XM_013508314;XM_013508315;XM_013508316;XM_013508317;XM_013508318;XM_013508319;XM_013508320 XP_005415400;XP_013363766;XP_013363767;XP_013363768;XP_013363769;XP_013363770;XP_013363771;XP_013363772;XP_013363773;XP_013363774 MODEL 8858480 protein-coding Fam219b family with sequence similarity 219 member B NW_004955450 3054761 3060064 + 102006188 AGCD01042420;GBDF01220158;XM_005393530;XM_013518861 XP_005393587;XP_013374315 MODEL 8824276 protein-coding LOC102019576 uncharacterized LOC102019576 NW_004955460 10273715 10276083 + 102019576 AGCD01048576;GBBH01064357;XM_013521115 XP_013376569 MODEL 10116232 ncrna LOC106150064 uncharacterized LOC106150064 NW_004955463 5507350 5558745 - 106150064 AGCD01049639;AGCD01049640;GBBH01168928;XR_001236639;XR_001236640;XR_001236641 MODEL 8707198 protein-coding Alcam activated leukocyte cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axon guidance (ortholog); heterophilic cell-cell adhesion (ortholog); motor neuron axon guidance (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); carcinoma (ortholog); FOUND IN axon (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) NW_004955427 6494657 6544668 + 102009083 AGCD01027030;GBBH01035028;GBCC01001133;XM_005386343 XP_005386400 MODEL 8995292 protein-coding Adprs ADP-ribosylserine hydrolase ENCODES a protein that exhibits ADP-ribosylserine hydrolase activity (ortholog); hydrolase activity, hydrolyzing O-glycosyl compounds (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular response to superoxide (ortholog); DNA repair (ortholog); negative regulation of necroptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); sensorineural hearing loss (ortholog); stress-induced childhood-onset neurodegeneration with variable ataxia and seizures (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955452 14123590 14126522 + 102025866 AGCD01044452;GBCB01074091;XM_013519533 XP_013374987 MODEL 8816637 protein-coding Kiaa1755 KIAA1755 ortholog ASSOCIATED WITH prostate cancer (ortholog) NW_004955445 18461126 18497134 + 102013664 AGCD01039905;GBDF01073855;XM_005392540;XM_005392541 XP_005392597;XP_005392598 MODEL 39131674 rrna 5S_rRNA 5S ribosomal RNA 8968030 protein-coding B4galt7 beta-1,4-galactosyltransferase 7 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); galactosyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN glycosaminoglycan biosynthetic process (ortholog); negative regulation of fibroblast proliferation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 1 (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955408 29837982 29847891 + 102005344 AGCD01008776;GBBH01142392;XM_013506598 XP_013362052 MODEL 9014487 ncrna LOC102024098 uncharacterized LOC102024098 NW_004955462 4008169 4011134 - 102024098 AGCD01049214;XR_263093 MODEL 39132505 snrna U6 U6 spliceosomal RNA 8865107 pseudo LOC102017997 RING finger and CHY zinc finger domain-containing protein 1 pseudogene NW_004955495 7385816 7387491 - 102017997 AGCD01062132 MODEL 9018002 protein-coding Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA lyase activity (ortholog); INVOLVED IN ketone body biosynthetic process (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955411 760660 881415 + 102007417 AGCD01011466;AGCD01011467;AGCD01011468;GBCB01075178;XM_013510905;XM_013510906;XM_013510907;XM_013510908 XP_013366359;XP_013366360;XP_013366361;XP_013366362 MODEL 8715189 protein-coding Pde6c phosphodiesterase 6C INVOLVED IN phototransduction, visible light (ortholog); response to light intensity (ortholog); retinal cone cell development (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 1 (ortholog); Achromatopsia 5 (ortholog) NW_004955507 129678 179586 + 102029539 AGCD01065463;AGCD01065464;GBDF01128897;XM_005407518;XM_005407519 XP_005407575;XP_005407576 MODEL 8756946 ncrna LOC102019889 uncharacterized LOC102019889 NW_004955458 3287100 3321509 - 102019889 AGCD01047291;AGCD01047292;AGCD01047293;GBDK01152885;XR_262967 MODEL 9044062 protein-coding Bhlhe23 basic helix-loop-helix family member e23 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of retinal cell programmed cell death (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); post-embryonic eye morphogenesis (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) NW_004955528 1094234 1094674 + 102019428 AGCD01069552;GBBH01169029;XM_005409997 XP_005410054 MODEL 9013641 protein-coding Serpinh1 serpin family H member 1 ENCODES a protein that exhibits unfolded protein binding (ortholog); INVOLVED IN chondrocyte development involved in endochondral bone morphogenesis (ortholog); collagen biosynthetic process (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955414 16284845 16292828 - 102024992 AGCD01015208;GBCE01003981;XM_005379884;XM_005379885;XM_013512064 XP_005379941;XP_005379942;XP_013367518 MODEL 39133895 misc_rna 7SK 7SK RNA 39132973 snrna U1 U1 spliceosomal RNA 9026467 protein-coding LOC102009968 translation initiation factor IF-2-like NW_004955426 21666851 21667753 - 102009968 AGCD01026595;XM_005386266 XP_005386323 MODEL 8915776 protein-coding Cfi complement factor I INVOLVED IN cellular response to interleukin-6 (ortholog); complement activation (ortholog); glomerulus development (ortholog); ASSOCIATED WITH age related macular degeneration 13 (ortholog); atypical hemolytic-uremic syndrome (ortholog); C3 Glomerulopathy 3 (ortholog); FOUND IN extracellular space (ortholog) NW_004955496 492217 553398 + 102025262 AGCD01062228;AGCD01062229;AGCD01062230;AGCD01062231;AGCD01062232;AGCD01062233;AGCD01062234;AGCD01062235;GBCE01089340;XM_013505440;XM_013505441 XP_013360894;XP_013360895 MODEL 8799359 pseudo LOC102022375 putative olfactory receptor 10D4 NW_004955412 24725544 24726480 + 102022375 AGCD01013124 MODEL 8932406 protein-coding Reps1 RALBP1 associated Eps domain containing 1 ENCODES a protein that exhibits SH3 domain binding (ortholog); ASSOCIATED WITH neurodegeneration with brain iron accumulation (ortholog); Neurodegeneration with Brain Iron Accumulation 7 (ortholog); FOUND IN clathrin-coated pit (ortholog); plasma membrane (ortholog) NW_004955436 20677676 20752842 + 102014485 AGCD01034035;AGCD01034036;AGCD01034037;AGCD01034038;GBBH01164522;GBBH01164524;XM_005389265;XM_005389266 XP_005389322;XP_005389323 MODEL 10063803 ncrna LOC106150065 uncharacterized LOC106150065 NW_004955463 7878341 8009516 - 106150065 AGCD01049748;AGCD01049749;AGCD01049750;AGCD01049751;AGCD01049752;GBDF01124015;XR_001236647 MODEL 8857438 protein-coding Ip6k2 inositol hexakisphosphate kinase 2 ENCODES a protein that exhibits flavonoid binding (ortholog); inositol hexakisphosphate 5-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN cellular response to flavonoid (ortholog); inositol phosphate biosynthetic process (ortholog); inositol phosphate metabolic process (ortholog); ASSOCIATED WITH Huntington's disease (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955532 766577 794461 - 102003690 AGCD01070152;AGCD01070153;GBDF01252337;XM_005410169;XM_013507647;XM_013507648 XP_005410226;XP_013363101;XP_013363102 MODEL 8827587 protein-coding Atp5mc2 ATP synthase membrane subunit c locus 2 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); INVOLVED IN pore complex assembly (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); response to ethanol (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); obesity (ortholog); renal cell carcinoma (ortholog); FOUND IN cation channel complex (ortholog); mitochondrion (ortholog) NW_004955458 952817 960963 - 102024430 AGCD01047160;GBDJ01017247;XM_005397191;XM_005397192 XP_005397248;XP_005397249 MODEL 8763735 pseudo LOC102014983 olfactory receptor 6C3-like NW_004955458 2658037 2658972 - 102014983 AGCD01047240 MODEL 8825216 protein-coding Wdfy2 WD repeat and FYVE domain containing 2 INVOLVED IN positive regulation of fat cell differentiation (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); vesicle (ortholog) NW_004955431 4809405 5086647 + 102030224 AGCD01030011;AGCD01030012;AGCD01030013;AGCD01030014;GBDF01161721;XM_005387605;XM_005387606;XM_005387607;XM_013515761;XM_013515762;XM_013515763;XR_261449 XP_005387662;XP_005387663;XP_005387664;XP_013371215;XP_013371216;XP_013371217 MODEL 8752356 protein-coding Trim63 tripartite motif containing 63 ENCODES a protein that exhibits titin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); muscle contraction (ortholog); myotube cell development (ortholog); ASSOCIATED WITH Atrophy (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN contractile muscle fiber (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955452 5517969 5531490 - 102012601 AGCD01044038;AGCD01044039;GBDI01181650;XM_005394841 XP_005394898 MODEL 9015695 protein-coding Apela apelin receptor early endogenous ligand ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); embryonic heart tube development (ortholog); ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955403 40257467 40266275 - 102013238 AGCD01002676;AGCD01002677;GBDI01055775;XM_013515250 XP_013370704 MODEL 39134467 misc_rna 7SK 7SK RNA 8975423 protein-coding Acy3 aminoacylase 3 ENCODES a protein that exhibits aminoacylase activity (ortholog); identical protein binding (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955422 17852295 17856946 + 102010063 AGCD01022932;GBCQ01010215;XM_005384297;XM_005384298 XP_005384354;XP_005384355 MODEL 8811891 pseudo LOC102005936 tyrosine-protein phosphatase non-receptor type 2-like NW_004955483 1097670 1098910 - 102005936 AGCD01057640 MODEL 9048933 protein-coding Pstpip2 proline-serine-threonine phosphatase interacting protein 2 ASSOCIATED WITH chronic recurrent multifocal osteomyelitis (ortholog); SAPHO syndrome (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955402 31538335 31637901 - 102027028 AGCD01000790;AGCD01000791;AGCD01000792;AGCD01000793;AGCD01000794;AGCD01000795;AGCD01000796;AGCD01000797;AGCD01000798;AGCD01000799;AGCD01000800;GBDJ01042045;XM_005372863;XM_013510408 XP_005372920;XP_013365862 MODEL 8960428 protein-coding Dnah6 dynein axonemal heavy chain 6 ASSOCIATED WITH Huntington's disease (ortholog); primary ciliary dyskinesia 45 (ortholog); primary ovarian insufficiency (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955424 2575333 2788742 - 102008433 AGCD01024293;AGCD01024294;AGCD01024295;AGCD01024296;AGCD01024297;GBDJ01350396;XM_005385447 XP_005385504 MODEL 8816927 protein-coding Dynlrb1 dynein light chain roadblock-type 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to light stimulus (ortholog); visual behavior (ortholog); PARTICIPATES IN mitochondria transport pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955422 26787879 26807901 - 102022713 AGCD01023303;GBCQ01008485;XM_005384828;XM_005384829;XM_005384830 XP_005384885;XP_005384886;XP_005384887 MODEL 9001392 protein-coding Tp53bp1 tumor protein p53 binding protein 1 ENCODES a protein that exhibits histone H4K20me methyltransferase activity (ortholog); histone H4K20me2 reader activity (ortholog); histone reader activity (ortholog); INVOLVED IN cellular response to X-ray (ortholog); DNA damage response (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); glioblastoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nuclear body (ortholog) NW_004955416 9962736 10035433 - 102005138 AGCD01017100;AGCD01017101;AGCD01017102;AGCD01017103;GBBH01227232;XM_005381379;XM_005381380;XM_005381381;XM_005381382;XM_005381383 XP_005381436;XP_005381437;XP_005381438;XP_005381439;XP_005381440 MODEL 8846430 pseudo LOC102010757 28S ribosomal protein S36, mitochondrial pseudogene NW_004955402 51239421 51239728 - 102010757 AGCD01001297 MODEL 8963878 protein-coding LOC102005173 trace amine-associated receptor 2 NW_004955436 13191916 13192815 - 102005173 AGCD01033855;XM_005415330 XP_005415387 MODEL 9060294 ncrna LOC102019577 uncharacterized LOC102019577 NW_004955462 2824711 2834104 - 102019577 AGCD01049187;AGCD01049188;GBDJ01047276;XR_263091 MODEL 8744770 protein-coding Plcd4 phospholipase C delta 4 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN acrosome reaction (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN cytosol (ortholog) NW_004955453 14775119 14812872 - 102006870 AGCD01044873;AGCD01044874;GBDK01398186;XM_013519913;XM_013519914;XM_013519915;XM_013519916;XM_013519917;XM_013519918;XM_013519920;XM_013519921;XM_013519922;XM_013519923;XM_013519924;XM_013519925 XP_013375367;XP_013375368;XP_013375369;XP_013375370;XP_013375371;XP_013375372;XP_013375374;XP_013375375;XP_013375376;XP_013375377;XP_013375378;XP_013375379 MODEL 8987417 protein-coding Asb18 ankyrin repeat and SOCS box containing 18 NW_004955453 460284 521131 + 102029262 AGCD01044591;AGCD01044592;AGCD01044593;GBCB01024949;GBCB01024951;XM_013519996 XP_013375450 MODEL 8964989 pseudo LOC102021377 nucleosome assembly protein 1-like 1 pseudogene NW_004955429 13983451 13984153 - 102021377 AGCD01028771 MODEL 8702771 protein-coding Hdac9 histone deacetylase 9 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cholesterol homeostasis (ortholog); determination of adult lifespan (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH atherosclerosis (ortholog); Auriculocondylar Syndrome 4 (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleus (ortholog) NW_004955410 21046312 21932029 + 102025552 AGCD01011056;AGCD01011057;AGCD01011058;AGCD01011059;AGCD01011060;AGCD01011061;AGCD01011062;AGCD01011063;AGCD01011064;AGCD01011065;AGCD01011066;GBDF01088540;XM_005377344;XM_005377345;XM_005377349;XM_005377350;XM_005377351;XM_013510571 XP_005377401;XP_005377402;XP_005377406;XP_005377407;XP_005377408;XP_013366025 MODEL 8766111 trna trnS2(tga) tRNA-Ser MT 6876 6944 - 15822205 10127659 pseudo LOC106147086 zinc finger protein 583-like NW_004955517 510840 513782 + 106147086 AGCD01067578 MODEL 8751758 pseudo LOC102012361 iron-sulfur cluster assembly 1 homolog, mitochondrial pseudogene NW_004955437 12049308 12050497 - 102012361 AGCD01034594 MODEL 9035854 protein-coding Kiaa1958 KIAA1958 ortholog ASSOCIATED WITH COVID-19 (ortholog) NW_004955419 14756207 14822763 - 102003657 AGCD01020044;GBDF01039862;XM_005382702;XM_005382704;XM_013513274 XP_005382759;XP_005382761;XP_013368728 MODEL 8944602 protein-coding Ptafr platelet activating factor receptor ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine (ortholog); cellular response to cAMP (ortholog); cellular response to fatty acid (ortholog); ASSOCIATED WITH Otitis Media with Effusion; Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 7309854 7345579 - 102012825 AGCD01044144;AGCD01044145;GBCE01013423;XM_005394941;XM_013519732;XM_013519733 XP_005394998;XP_013375186;XP_013375187 MODEL 39133273 snrna U4 U4 spliceosomal RNA 8820553 protein-coding Fhip2a FHF complex subunit HOOK interacting protein 2A ASSOCIATED WITH melanoma (ortholog); syndromic intellectual disability (ortholog) NW_004955431 19751575 19780905 + 102018757 AGCD01030455;GBBH01186995;GBCE01153442;XM_013515880 XP_013371334 MODEL 8831522 ncrna LOC102017222 uncharacterized LOC102017222 NW_004955470 3874997 3878837 - 102017222 AGCD01052712;GBDF01015388;XR_263469 MODEL 8854196 protein-coding Gosr1 golgi SNAP receptor complex member 1 ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955481 2831118 2876756 - 102030077 AGCD01056887;GBDK01322232;XM_005402651;XM_005402652 XP_005402708;XP_005402709 MODEL 8877786 protein-coding Thoc5 THO complex subunit 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); cell morphogenesis (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH anemia (ortholog); breast carcinoma (ortholog); leukopenia (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 3761933 3795517 - 102008060 AGCD01045650;AGCD01045651;GBCB01056026;XM_005396212;XM_013520426 XP_005396269;XP_013375880 MODEL 8758411 protein-coding Bhlhe40 basic helix-loop-helix family member e40 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH advanced sleep phase syndrome (ortholog); bipolar disorder (ortholog); COVID-19 (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) NW_004955421 8463337 8468877 - 102018503 AGCD01021814;GBBH01119101;XM_005383740 XP_005383797 MODEL 9063433 protein-coding Gcnt4 glucosaminyl (N-acetyl) transferase 4 INVOLVED IN homeostasis of number of cells (ortholog); inter-male aggressive behavior (ortholog); kidney morphogenesis (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955425 25661648 25681948 + 102027426 AGCD01025927;GBCQ01026024;XM_005386055;XM_005386056;XM_013514799;XM_013514800 XP_005386112;XP_005386113;XP_013370253;XP_013370254 MODEL 10212608 protein-coding Fam220a family with sequence similarity 220 member A ENCODES a protein that exhibits STAT family protein binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); protein dephosphorylation (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955460 13329417 13335986 + 106146247 AGCD01048680;AGCD01048681;XM_013521170 XP_013376624 MODEL 8750352 protein-coding LOC102009970 olfactory receptor 5M10-like NW_004955511 1738489 1739436 + 102009970 AGCD01066378;XM_005407975 XP_005408032 MODEL 8700662 protein-coding Aldh16a1 aldehyde dehydrogenase 16 family member A1 ASSOCIATED WITH gout (ortholog); HRPT-related hyperuricemia (ortholog); hyperuricemia (ortholog) NW_004955559 1376862 1390861 - 102016644 AGCD01073641;AGCD01073642;GBCQ01035042;XM_005412882;XM_013509018 XP_005412939;XP_013364472 MODEL 8909007 protein-coding B4gat1 beta-1,4-glucuronyltransferase 1 ENCODES a protein that exhibits glucuronosyltransferase activity (ortholog); N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN axon guidance (ortholog); glycoprotein biosynthetic process (ortholog); poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); congenital muscular dystrophy-dystroglycanopathy type A1 (ortholog); congenital muscular dystrophy-dystroglycanopathy type A13 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955422 18979545 18981889 + 102012768 AGCD01022970;GBBH01026998;XM_005384408 XP_005384465 MODEL 8790788 ncrna LOC102022380 uncharacterized LOC102022380 NW_004955471 5650960 5654958 + 102022380 AGCD01053108;GBDF01013412;XR_263524 MODEL 8716572 pseudo LOC102006974 40S ribosomal protein S10 pseudogene NW_004955404 27148218 27148697 + 102006974 AGCD01003909 MODEL 39134160 misc_rna 7SK 7SK RNA 39132307 rrna 5S_rRNA 5S ribosomal RNA 9035918 protein-coding Reps2 RALBP1 associated Eps domain containing 2 ASSOCIATED WITH Breast Neoplasms (ortholog); developmental and epileptic encephalopathy 1 (ortholog) NW_004955519 1131027 1358313 - 102005076 AGCD01067882;AGCD01067883;AGCD01067884;AGCD01067885;AGCD01067886;AGCD01067887;AGCD01067888;AGCD01067889;GBCE01084254;GBDJ01193078;XM_005409136 XP_005409193 MODEL 10158233 ncrna LOC106150066 uncharacterized LOC106150066 NW_004955463 8607571 8738500 + 106150066 AGCD01049766;AGCD01049767;AGCD01049768;GBDF01305926;XR_001236648 MODEL 8720613 protein-coding LOC102019891 olfactory receptor 6C2-like NW_004955458 2686793 2687737 - 102019891 AGCD01047240;XM_013520844 XP_013376298 MODEL 8756285 ncrna LOC102014986 uncharacterized LOC102014986 NW_004955460 8763570 8766013 - 102014986 AGCD01048531;GBDF01087105;XR_263044 MODEL 8807667 protein-coding Pde6d phosphodiesterase 6D ENCODES a protein that exhibits GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); ASSOCIATED WITH genetic disease (ortholog); Joubert syndrome 22 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955453 3992160 4024695 + 102019465 AGCD01044672;GBCQ01092966;XM_005395388 XP_005395445 MODEL 8809146 protein-coding Ip6k3 inositol hexakisphosphate kinase 3 ENCODES a protein that exhibits inositol hexakisphosphate 6-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN inositol phosphate biosynthetic process (ortholog); locomotion (ortholog); phosphatidylinositol metabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955437 2128337 2150714 - 102011041 AGCD01034260;GBCB01021741;XM_005389508;XM_013516932 XP_005389565;XP_013372386 MODEL 8908863 protein-coding Kiaa2012 KIAA2012 ortholog NW_004955457 12558341 12697528 - 102008187 AGCD01047020;AGCD01047021;AGCD01047022;AGCD01047023;AGCD01047024;AGCD01047025;GBBH01151598;XM_005397059;XM_013520727;XM_013520728;XM_013520729 XP_005397116;XP_013376181;XP_013376182;XP_013376183 MODEL 39134468 misc_rna 7SK 7SK RNA 8851310 ncrna LOC102003439 uncharacterized LOC102003439 NW_004955415 12033874 12040445 - 102003439 AGCD01016183;GBDF01015290;XR_001233199 MODEL 8918958 protein-coding Serpini1 serpin family I member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); ASSOCIATED WITH familial encephalopathy with neuroserpin inclusion bodies (ortholog); genetic disease (ortholog); Nervous System Malformations (ortholog); FOUND IN cytoplasmic vesicle lumen (ortholog); extracellular space (ortholog); neuronal cell body (ortholog) NW_004955448 16947375 16982114 + 102012485 AGCD01041705;AGCD01041706;AGCD01041707;GBBH01191602;XM_005393142;XM_013518652;XM_013518653 XP_005393199;XP_013374106;XP_013374107 MODEL 8758570 protein-coding Ttc27 tetratricopeptide repeat domain 27 ASSOCIATED WITH neuromuscular disease (ortholog) NW_004955441 945619 1111973 + 102023299 AGCD01036743;AGCD01036744;AGCD01036745;AGCD01036746;AGCD01036747;GBDF01192444;XM_005390841 XP_005390898 MODEL 8919326 protein-coding Wdfy3 WD repeat and FYVE domain containing 3 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN aggrephagy (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 1 (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) NW_004955474 4764902 5045421 + 102025904 AGCD01054386;AGCD01054387;AGCD01054388;AGCD01054389;AGCD01054390;AGCD01054391;AGCD01054392;GBDK01190489;XM_005401374;XM_013502725;XM_013502726;XM_013502727;XM_013502728;XM_013502729;XM_013502730 XP_005401431;XP_013358179;XP_013358180;XP_013358181;XP_013358182;XP_013358183;XP_013358184 MODEL 8758232 protein-coding Acyp1 acylphosphatase 1 PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway NW_004955523 499508 507809 + 102013963 AGCD01068460;GBDJ01387062;XM_005409377 XP_005409434 MODEL 39131675 rrna 5S_rRNA 5S ribosomal RNA 8887064 protein-coding LOC102010758 vomeronasal type-1 receptor 3-like NW_004955603 530648 531616 + 102010758 AGCD01076850;XM_005414847 XP_005414904 MODEL 8826230 protein-coding Cfl1 cofilin 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); phosphatidylinositol bisphosphate binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament fragmentation (ortholog); actin filament organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH brain compression (ortholog); Breast Neoplasms (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cell leading edge (ortholog); cell-cell junction (ortholog); cofilin-actin rod (ortholog) NW_004955422 19479181 19482571 + 102027078 AGCD01023011;GBDI01011011;XM_013513851 XP_013369305 MODEL 8992610 pseudo LOC102018000 DCN1-like protein 4 NW_004955424 950236 952921 + 102018000 AGCD01024225 MODEL 9059825 protein-coding Adra1a adrenoceptor alpha 1A ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN response to cocaine; adrenergic receptor signaling pathway (ortholog); adult heart development (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); bladder neck obstruction (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dopaminergic synapse (ortholog) NW_004955403 49394173 49485881 - 102029468 AGCD01002943;AGCD01002944;AGCD01002945;AGCD01002946;GBDF01041155;XM_013514140;XM_013514141;XM_013514144 XP_013369594;XP_013369595;XP_013369598 MODEL 8841111 protein-coding LOC102021378 olfactory receptor 4A15-like NW_004955511 55303 56220 - 102021378 AGCD01066312;XM_005408175 XP_005408232 MODEL 39133896 misc_rna 7SK 7SK RNA 10114782 ncrna LOC106147087 uncharacterized LOC106147087 NW_004955408 35473043 35581443 + 106147087 AGCD01008946;AGCD01008947;AGCD01008948;AGCD01008949;AGCD01008950;AGCD01008951;AGCD01008952;AGCD01008953;AGCD01008954;AGCD01008955;AGCD01008956;AGCD01008957;XR_001231823;XR_001231824;XR_001231826 MODEL 8818666 pseudo LOC102012364 protein angel homolog 2-like NW_004955439 11699313 11700945 - 102012364 AGCD01035919 MODEL 8950397 protein-coding Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); chromatin DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cell redox homeostasis (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) NW_004955550 1273170 1275843 + 102025292 AGCD01072559;GBDF01088118;XM_005412062;XM_013508571 XP_005412119;XP_013364025 MODEL 8796283 protein-coding Fhip2b FHF complex subunit HOOK interacting protein 2B NW_004955403 45587970 45597700 + 102015591 AGCD01002824;GBCQ01092807;GBDF01049517;XM_013513731;XM_013513735 XP_013369185;XP_013369189 MODEL 8875762 pseudo LOC102017225 polypeptide N-acetylgalactosaminyltransferase 1-like NW_004955471 2742094 2743946 + 102017225 AGCD01053044 MODEL 8725692 protein-coding Dnah7 dynein axonemal heavy chain 7 INVOLVED IN cilium movement (ortholog); inner dynein arm assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); epilepsy (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cilium (ortholog); inner dynein arm (ortholog); sperm annulus (ortholog) NW_004955403 4189887 4426405 + 102020073 AGCD01001780;AGCD01001781;AGCD01001782;AGCD01001783;AGCD01001784;AGCD01001785;AGCD01001786;GBBH01004459;XM_005373280;XR_001233192 XP_005373337 MODEL 39132507 snrna U6 U6 spliceosomal RNA 8798068 protein-coding Pde6g phosphodiesterase 6G ENCODES a protein that exhibits spectrin binding (ortholog); INVOLVED IN positive regulation of epidermal growth factor receptor signaling pathway (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); retinitis pigmentosa 57 (ortholog) NW_004955506 1437645 1441758 + 102030217 AGCD01065263;GBBH01223939;XM_005407267 XP_005407324 MODEL 8982558 protein-coding Kiaa2013 KIAA2013 ortholog NW_004955486 1996057 2002308 + 102018735 AGCD01058978;AGCD01058979;GBBH01034213;XM_005404300 XP_005404357 MODEL 9066457 protein-coding Bhlhe41 basic helix-loop-helix family member e41 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH esophageal cancer (ortholog); Familial Natural Short Sleep 1 (ortholog); lung adenocarcinoma (ortholog) NW_004955413 21100021 21103358 - 102004268 AGCD01014246;GBCB01005694;GBCQ01007548;XM_013511397 XP_013366851 MODEL 8949221 trna trnT(tgt) tRNA-Thr MT 15303 15370 + 15822215 8758614 protein-coding Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ENCODES a protein that exhibits coenzyme A binding (ortholog); GTPase regulator activity (ortholog); hydroxymethylglutaryl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); peroxisomal membrane (ortholog) NW_004955425 25362165 25380611 - 102026024 AGCD01025915;GBDF01077743;XM_005386052 XP_005386109 MODEL 8710348 protein-coding Plce1 phospholipase C epsilon 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); enzyme binding (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); epidermal growth factor receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); benign familial hematuria (ortholog); dengue hemorrhagic fever (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); plasma membrane (ortholog) NW_004955507 555570 825568 + 102004404 AGCD01065477;AGCD01065478;AGCD01065479;AGCD01065480;AGCD01065481;AGCD01065482;AGCD01065483;AGCD01065484;AGCD01065485;AGCD01065486;AGCD01065487;AGCD01065488;GBDK01321403;XM_005407528;XM_013506159;XM_013506160 XP_005407585;XP_013361613;XP_013361614 MODEL 8830504 protein-coding Hdc histidine decarboxylase ENCODES a protein that exhibits amino acid binding (ortholog); histidine decarboxylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN histamine biosynthetic process (ortholog); L-histidine catabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH asthma (ortholog); Chlamydophila Infections (ortholog); Gilles de la Tourette syndrome (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955409 4051574 4072641 + 102004567 AGCD01009272;GBDF01116811;XM_005376674 XP_005376731 MODEL 8955828 protein-coding Fam221a family with sequence similarity 221 member A NW_004955410 25872453 25902887 + 102017430 AGCD01011180;AGCD01011181;GBDF01046009;XM_005377406;XM_005377407;XM_005377408;XM_005377409;XM_005377410;XM_005377411 XP_005377463;XP_005377464;XP_005377465;XP_005377466;XP_005377467;XP_005377468 MODEL 8992421 protein-coding Asb2 ankyrin repeat and SOCS box containing 2 ENCODES a protein that exhibits cullin family protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); ubiquitin ligase complex (ortholog); Z disc (ortholog) NW_004955438 16005570 16041668 - 102009220 AGCD01035391;AGCD01035392;AGCD01035393;GBCB01005612;XM_005390356;XM_005390357 XP_005390413;XP_005390414 MODEL 8889247 pseudo LOC102022383 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955414 28884771 28926524 + 102022383 AGCD01015691;AGCD01015692;AGCD01015693;AGCD01015694;AGCD01015695;AGCD01015696;AGCD01015697 MODEL 8846337 ncrna LOC102006975 uncharacterized LOC102006975 NW_004955405 613272 642517 + 102006975 AGCD01004581;AGCD01004582;GBDF01305850;XR_001235174;XR_001235177;XR_259353;XR_259354 MODEL 9054230 protein-coding Aldh18a1 aldehyde dehydrogenase 18 family member A1 ENCODES a protein that exhibits delta1-pyrroline-5-carboxylate synthetase activity (ortholog); glutamate 5-kinase activity (ortholog); glutamate-5-semialdehyde dehydrogenase activity (ortholog); INVOLVED IN citrulline biosynthetic process (ortholog); glutamate metabolic process (ortholog); L-proline biosynthetic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal dominant cutis laxa (ortholog); autosomal dominant cutis laxa 3 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955507 1892087 1946526 - 102009637 AGCD01065573;AGCD01065574;AGCD01065575;GBDJ01272098;XM_005407547;XM_005407548;XM_013506238 XP_005407604;XP_005407605;XP_013361692 MODEL 8798634 protein-coding Carmil3 capping protein regulator and myosin 1 linker 3 INVOLVED IN regulation of postsynapse assembly (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955409 36324141 36341648 - 102015295 AGCD01010456;GBDJ01237974;XM_005377058;XM_013510413;XM_013510414;XM_013510415;XM_013510416;XM_013510417;XM_013510418;XM_013510419;XM_013510420;XM_013510421;XM_013510422;XM_013510423 XP_005377115;XP_013365867;XP_013365868;XP_013365869;XP_013365870;XP_013365871;XP_013365872;XP_013365873;XP_013365874;XP_013365875;XP_013365876;XP_013365877 MODEL 39133275 snrna U4 U4 spliceosomal RNA 8723885 protein-coding B9d1 B9 domain containing 1 ENCODES a protein that exhibits hedgehog receptor activity (ortholog); INVOLVED IN camera-type eye development (ortholog); cilium assembly (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); ciliopathy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955467 405487 415887 + 102003222 AGCD01051219;GBDF01002264;XM_005399272;XM_005399273;XM_013522256 XP_005399329;XP_005399330;XP_013377710 MODEL 8765419 protein-coding Ptar1 protein prenyltransferase alpha subunit repeat containing 1 FOUND IN mitochondrion (ortholog) NW_004955434 3309819 3356746 + 102003056 AGCD01032132;GBCQ01141133;XM_005388558 XP_005388615 MODEL 8942158 pseudo LOC102005937 olfactory receptor 2S2-like NW_004955419 21770973 21771933 + 102005937 AGCD01020283 MODEL 8762053 protein-coding Rer1 retention in endoplasmic reticulum sorting receptor 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN maintenance of protein localization in endoplasmic reticulum (ortholog); neuromuscular junction development (ortholog); positive regulation of protein localization to plasma membrane (ortholog); FOUND IN cell surface (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955486 8791457 8802691 - 102007903 AGCD01059156;GBDJ01075964;XM_005404170;XM_005404171 XP_005404227;XP_005404228 MODEL 10386954 ncrna LOC106150067 uncharacterized LOC106150067 NW_004955463 13702644 13731579 - 106150067 AGCD01049885;GBDF01225662;XR_001236649 MODEL 8887401 protein-coding LOC102021380 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related-like NW_004955514 3946950 3967642 - 102021380 AGCD01067122;AGCD01067123;GBCB01073188;XM_005408817;XM_013506852;XM_013506853 XP_005408874;XP_013362306;XP_013362307 MODEL 8779392 protein-coding Gosr2 golgi SNAP receptor complex member 2 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); intra-Golgi vesicle-mediated transport (ortholog); vesicle-mediated transport (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); MUSCULAR DYSTROPHY, CONGENITAL, WITH OR WITHOUT SEIZURES (ortholog); progressive myoclonus epilepsy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955478 10868912 10889405 + 102018182 AGCD01056152;GBCE01186161;XM_005402273 XP_005402330 MODEL 8764659 ncrna LOC102024099 uncharacterized LOC102024099 NW_004955463 6815241 6819726 - 102024099 AGCD01049706;GBDJ01170656;XR_001236633 MODEL 8784131 ncrna LOC102005180 uncharacterized LOC102005180 NW_004955540 2515392 2519809 + 102005180 AGCD01071321;GBDF01244999;XR_264826 MODEL 8762323 ncrna LOC102019579 uncharacterized LOC102019579 NW_004955464 1398380 1406201 + 102019579 AGCD01049949;GBDK01036642;XR_263190 MODEL 8995716 protein-coding Tp53bp2 tumor protein p53 binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); NF-kappaB binding (ortholog); p53 binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of cellular process (ortholog); positive regulation of execution phase of apoptosis (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH breast lobular carcinoma (ortholog); Breast Neoplasms (ortholog); chromosome 1q41-q42 deletion syndrome (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955520 1254853 1285118 + 102011472 AGCD01068050;GBCB01040894;XM_013507058;XM_013507059;XM_013507060;XM_013507061 XP_013362512;XP_013362513;XP_013362514;XP_013362515 MODEL 8725840 protein-coding Serpini2 serpin family I member 2 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH Shwachman-Diamond syndrome (ortholog) NW_004955448 16679885 16694484 - 102027247 AGCD01041701;GBBH01104730;XM_005393166 XP_005393223 MODEL 9049118 protein-coding LOC102009973 olfactory receptor 10AG1-like NW_004955511 872782 873738 - 102009973 AGCD01066345;XM_005408215 XP_005408272 MODEL 8902123 protein-coding Atp5mc3 ATP synthase membrane subunit c locus 3 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); INVOLVED IN pore complex assembly (ortholog); response to (R)-carnitine (ortholog); response to ethanol (ortholog); ASSOCIATED WITH COVID-19 (ortholog); early-onset dystonia and/or spastic paraplegia (ortholog); genetic disease (ortholog); FOUND IN cation channel complex (ortholog); mitochondrion (ortholog) NW_004955449 310839 314086 + 102029247 AGCD01041762;GBDJ01006372;XM_005393170 XP_005393227 MODEL 39134161 misc_rna 7SK 7SK RNA 39132975 snrna U1 U1 spliceosomal RNA 8921188 protein-coding Dynlrb2 dynein light chain roadblock-type 2 PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic dynein complex (ortholog) NW_004955522 3353087 3364276 + 102027668 AGCD01068381;GBCQ01069321;XM_005409345 XP_005409402 MODEL 8720450 protein-coding Bhmt betaine--homocysteine S-methyltransferase ENCODES a protein that exhibits betaine-homocysteine S-methyltransferase activity (ortholog); identical protein binding (ortholog); methyltransferase activity (ortholog); INVOLVED IN amino-acid betaine metabolic process (ortholog); L-methionine salvage (ortholog); obsolete methionine biosynthetic process (ortholog); PARTICIPATES IN choline metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); cerebral infarction (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); extracellular exosome (ortholog); extracellular space (ortholog) NW_004955425 21992219 22009389 - 102013102 AGCD01025810;AGCD01025811;AGCD01025812;GBCQ01010786;XM_005386012 XP_005386069 MODEL 39134469 misc_rna 7SK 7SK RNA 8855855 pseudo LOC102003440 ankyrin repeat domain-containing protein 27 pseudogene NW_004955474 5254195 5258861 - 102003440 AGCD01054402 MODEL 8838597 protein-coding Ipcef1 interaction protein for cytohesin exchange factors 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); lymphoid leukemia (ortholog) NW_004955439 7666246 7836481 + 102023296 AGCD01035772;AGCD01035773;AGCD01035774;AGCD01035775;AGCD01035776;GBDI01386749;XM_005390558;XM_005390559;XM_005390561;XM_013517366;XM_013517367;XM_013517368;XM_013517369;XM_013517370;XM_013517371 XP_005390615;XP_005390616;XP_005390618;XP_013372820;XP_013372821;XP_013372822;XP_013372823;XP_013372824;XP_013372825 MODEL 9038941 protein-coding Gcnt7 glucosaminyl (N-acetyl) transferase family member 7 NW_004955445 2737228 2750104 + 102008783 AGCD01039364;GBBH01056981;XM_005392265;XM_005392266 XP_005392322;XP_005392323 MODEL 8713676 protein-coding Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 FOUND IN fibrillar center (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955475 2343992 2359492 + 102024790 AGCD01054801;GBCB01086482;XM_005401531 XP_005401588 MODEL 8753860 protein-coding Acyp2 acylphosphatase 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH chronic recurrent multifocal osteomyelitis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955415 32510613 32511105 + 102003441 AGCD01016723;GBDF01193184;XM_005381058 XP_005381115 MODEL 8988463 pseudo LOC102017228 olfactory receptor 502-like NW_004955414 23588227 23604671 - 102017228 AGCD01015502;AGCD01015503;AGCD01015504;AGCD01015505 MODEL 8737414 ncrna LOC102018002 uncharacterized LOC102018002 NW_004955425 14697359 14703469 + 102018002 AGCD01025567;GBDF01279132;XR_261143 MODEL 39131676 rrna 5S_rRNA 5S ribosomal RNA 8772544 protein-coding Cfl2 cofilin 2 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament fragmentation (ortholog); actin filament organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); centronuclear myopathy (ortholog); genetic disease (ortholog); FOUND IN I band (ortholog); Z disc (ortholog) NW_004955409 26247050 26250082 + 102006429 AGCD01010166;GBDF01004915;GBDJ01086349;XM_013510377 XP_013365831 MODEL 8709255 protein-coding Trim65 tripartite motif containing 65 ENCODES a protein that exhibits protein domain specific binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955506 6362360 6366743 + 102010076 AGCD01065413;AGCD01065414;GBCE01065169;GBDI01290894;XM_013506003 XP_013361457 MODEL 8934095 protein-coding Dnah8 dynein axonemal heavy chain 8 ENCODES a protein that exhibits microtubule motor activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Ciliary Motility Disorders (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN axoneme (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955437 4441776 4722261 - 102013538 AGCD01034365;AGCD01034366;AGCD01034367;AGCD01034368;AGCD01034369;GBBH01019158;XM_005389605;XM_005389606;XM_005389607;XM_005389608 XP_005389662;XP_005389663;XP_005389664;XP_005389665 MODEL 8729195 protein-coding Adra1b adrenoceptor alpha 1B ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adult heart development (ortholog); behavioral response to cocaine (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Liver Cirrhosis (ortholog); hyperinsulinism (ortholog); FOUND IN cytoplasm (ortholog); intercalated disc (ortholog); membrane (ortholog) NW_004955408 13883574 13937798 + 102020769 AGCD01008376;AGCD01008377;AGCD01008378;GBDK01070153;GBDK01070156;XM_013506606 XP_013362060 MODEL 8891865 protein-coding Hddc2 HD domain containing 2 NW_004955436 6675892 6694086 - 102029553 AGCD01033691;AGCD01033692;GBDF01090317;XM_005389156 XP_005389213 MODEL 39133897 misc_rna 7SK 7SK RNA 8932625 protein-coding Fam221b family with sequence similarity 221 member B NW_004955472 489530 497224 + 102003960 AGCD01053339;GBDF01002811;XM_005400987;XM_005400988 XP_005401044;XP_005401045 MODEL 8819644 ncrna LOC102014989 uncharacterized LOC102014989 NW_004955410 25785045 25786514 + 102014989 AGCD01011174;GBDF01090003;XR_259867 MODEL 9035953 protein-coding Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA synthase activity (ortholog); isomerase activity (ortholog); organic acid binding (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); obesity (ortholog); rigid spine muscular dystrophy 1 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955446 18978261 18996794 + 102005319 AGCD01040419;AGCD01040420;GBDF01090323;XM_005392745;XM_005392746 XP_005392802;XP_005392803 MODEL 9043837 ncrna LOC102012371 uncharacterized LOC102012371 NW_004955443 10531041 10537221 - 102012371 AGCD01038378;GBBH01158501;XR_001235449 MODEL 9041885 protein-coding B9d2 B9 domain containing 2 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH ciliopathy (ortholog); Joubert syndrome (ortholog); Joubert syndrome 1 (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955555 288919 295861 - 102015459 AGCD01073024;GBDK01361917;XM_005412340;XM_005412341 XP_005412397;XP_005412398 MODEL 8935000 protein-coding Rere arginine-glutamic acid dipeptide repeats ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN branching morphogenesis of a nerve (ortholog); cerebellar granule cell precursor proliferation (ortholog); cerebellar Purkinje cell layer maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); cleft palate (ortholog); FOUND IN histone deacetylase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955486 4303573 4695800 + 102026871 AGCD01059057;AGCD01059058;AGCD01059059;AGCD01059060;AGCD01059061;AGCD01059062;AGCD01059063;GBBH01091311;GBDF01085949;XM_013504212 XP_013359666 MODEL 8931635 protein-coding Ptbp1 polypyrimidine tract binding protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); regulatory region RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cardiac ventricle development (ortholog); IRES-dependent viral translational initiation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN neuron projection terminus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 6990565 7002492 - 102019185 AGCD01062109;AGCD01062110;GBBH01001751;XM_005406021;XM_005406023;XM_013505338;XM_013505339 XP_005406078;XP_005406080;XP_013360792;XP_013360793 MODEL 9048585 ncrna LOC102010759 uncharacterized LOC102010759 NW_004955403 1971342 1976194 - 102010759 AGCD01001728;GBDF01124321;XR_259134 MODEL 8959376 protein-coding Got1 glutamic-oxaloacetic transaminase 1 ENCODES a protein that exhibits 2-aminobutanoate transaminase activity (ortholog); carboxylic acid binding (ortholog); L-aspartate:2-oxoglutarate aminotransferase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to glucagon stimulus (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN AGAT deficiency pathway; alkaptonuria pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); amyloidosis (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955507 5346937 5370072 - 102015653 AGCD01065671;GBDI01132595;XM_005407670 XP_005407727 MODEL 39132508 snrna U6 U6 spliceosomal RNA 8741352 pseudo LOC102003443 mitochondrial fission factor pseudogene NW_004955416 13475518 13476401 - 102003443 AGCD01017224;XM_005381465 MODEL 9008714 protein-coding Kics2 KICSTOR subunit 2 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); negative regulation of TORC1 signaling (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 83 (ortholog); polycystic ovary syndrome (ortholog); FOUND IN KICSTOR complex (ortholog) NW_004955458 11027550 11048563 - 102008505 AGCD01047714;AGCD01047715;GBBH01193744;GBDF01082041;XM_013520920 XP_013376374 MODEL 9053332 protein-coding Pde6h phosphodiesterase 6H INVOLVED IN positive regulation of epidermal growth factor receptor signaling pathway (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH achromatopsia 6 (ortholog); color blindness (ortholog); cone-rod dystrophy 14 (ortholog) NW_004955413 11654252 11711799 + 102004369 AGCD01013966;GBDJ01103597;XM_005379015;XM_013511586;XM_013511587;XM_013511588 XP_005379072;XP_013367040;XP_013367041;XP_013367042 MODEL 8920897 protein-coding Sertad1 SERTA domain containing 1 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955578 848920 852193 + 102012705 AGCD01075500;GBDF01188769;XM_005414046;XM_013509664 XP_005414103;XP_013365118 MODEL 9008756 ncrna LOC102009976 uncharacterized LOC102009976 NW_004955515 4423696 4427822 - 102009976 AGCD01067320;GBDF01279453;XR_001231800;XR_001231801;XR_001231802;XR_001231803 MODEL 39134162 misc_rna 7SK 7SK RNA 9005279 protein-coding Plcg1 phospholipase C gamma 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); glutamate receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); calcium-mediated signaling (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cell-cell junction (ortholog); clathrin-coated vesicle (ortholog); COP9 signalosome (ortholog) NW_004955445 15787496 15823859 - 102004432 AGCD01039855;AGCD01039856;GBCE01077323;GBDF01085611;XM_005392520 XP_005392577 MODEL 8912933 pseudo LOC102022385 tropomyosin alpha-3 chain pseudogene NW_004955415 23751994 23752771 - 102022385 AGCD01016560;XR_260339 MODEL 39132977 snrna U1 U1 spliceosomal RNA 10368634 ncrna LOC106147088 uncharacterized LOC106147088 NW_004955517 1480877 1499189 + 106147088 AGCD01067598;AGCD01067599;GBDI01195112;XR_001231822 MODEL 8880962 protein-coding Asb3 ankyrin repeat and SOCS box containing 3 INVOLVED IN gene expression (ortholog); host-mediated modulation of intestinal microbiota composition (ortholog); inflammatory response (ortholog) NW_004955441 19427843 19511583 - 102030004 AGCD01037347;AGCD01037348;GBCB01088659;XM_005391023;XM_005391024;XM_005391025;XM_013517555;XM_013517556;XM_013517557;XM_013517558;XM_013517559 XP_005391080;XP_005391081;XP_005391082;XP_013373009;XP_013373010;XP_013373011;XP_013373012;XP_013373013 MODEL 8809041 protein-coding Thoc6 THO complex subunit 6 INVOLVED IN central nervous system development (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH Beaulieu-Boycott-Innes Syndrome (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955442 14314100 14317726 - 102007059 AGCD01037810;GBDK01189523;XM_005391375;XM_005391377 XP_005391432;XP_005391434 MODEL 10193152 ncrna LOC106150068 uncharacterized LOC106150068 NW_004955463 1326927 1328916 - 106150068 AGCD01049509;XR_001236650 MODEL 9033701 ncrna LOC102005939 uncharacterized LOC102005939 NW_004955420 14870439 14874125 + 102005939 AGCD01020956;GBDI01175768;XR_001233663;XR_001233664;XR_001233665 MODEL 8926591 protein-coding Adra1d adrenoceptor alpha 1D ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure (ortholog); neuron-glial cell signaling (ortholog); norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH diastolic heart failure (ortholog); polycystic ovary syndrome (ortholog) NW_004955415 15000257 15022712 - 102006451 AGCD01016321;AGCD01016322;GBDK01383489;XM_013512129 XP_013367583 MODEL 39134470 misc_rna 7SK 7SK RNA 8891709 protein-coding Hddc3 HD domain containing 3 NW_004955416 14993492 14995818 - 102020802 AGCD01017295;GBDF01082302;XM_005381526 XP_005381583 MODEL 8940002 protein-coding Fhit fragile histidine triad diadenosine triphosphatase ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); adenylylsulfatase activity (ortholog); adenylylsulfate-ammonia adenylyltransferase activity (ortholog); INVOLVED IN diadenosine triphosphate catabolic process (ortholog); DNA replication (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955430 221518 508094 + 102030107 AGCD01029093;AGCD01029094;AGCD01029095;GBDJ01064341;XM_005387532 XP_005387589 MODEL 8966399 ncrna LOC102005183 uncharacterized LOC102005183 NW_004955439 1843897 1881335 + 102005183 AGCD01035628;GBDF01100877;XR_001235170;XR_001235171;XR_261965;XR_261966 MODEL 39132312 rrna 5S_rRNA 5S ribosomal RNA 8944561 protein-coding Bicc1 BicC family RNA binding protein 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); heart development (ortholog); kidney development (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); CAKUT (ortholog) NW_004955425 12237611 12522321 + 102010385 AGCD01025504;AGCD01025505;AGCD01025506;AGCD01025507;AGCD01025508;AGCD01025509;AGCD01025510;AGCD01025511;GBCE01077752;XM_005385916;XM_013514878 XP_005385973;XP_013370332 MODEL 8920097 protein-coding Gcsam germinal center associated signaling and motility ENCODES a protein that exhibits actin binding (ortholog); myosin II binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of lymphocyte migration (ortholog); regulation of B cell receptor signaling pathway (ortholog) NW_004955427 12524261 12533773 - 102025142 AGCD01027218;GBDI01086335;XM_013515053 XP_013370507 MODEL 8843354 pseudo LOC102019897 GTP-binding protein SAR1b pseudogene NW_004955465 4712734 4713289 - 102019897 AGCD01050414 MODEL 8892948 protein-coding LOC102006979 keratin-associated protein 20-2-like NW_004955407 30156701 30156859 + 102006979 AGCD01007628;XM_005375640 XP_005375697 MODEL 39133277 snrna U4 U4 spliceosomal RNA 39131677 rrna 5S_rRNA 5S ribosomal RNA 8731628 pseudo LOC102018003 ubiquitin-conjugating enzyme E2 C pseudogene NW_004955500 8246022 8246543 - 102018003 AGCD01063985 MODEL 8793483 protein-coding Cflar CASP8 and FADD like apoptosis regulator ENCODES a protein that exhibits death receptor binding (ortholog); enzyme activator activity (ortholog); peptidase activator activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Carotid Artery Injuries (ortholog); congestive heart failure (ortholog); FOUND IN CD95 death-inducing signaling complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 415092 442214 - 102021722 AGCD01001691;GBCE01120410;XM_005373203;XM_005373204;XM_005373205;XM_005373206;XM_005373208;XM_013511733;XM_013511737;XM_013511739;XM_013511740 XP_005373260;XP_005373261;XP_005373262;XP_005373263;XP_005373265;XP_013367187;XP_013367191;XP_013367193;XP_013367194 MODEL 8937564 protein-coding Dynlt1 dynein light chain Tctex-type 1 ENCODES a protein that exhibits identical protein binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN axon development (ortholog); cardiac muscle cell apoptotic process (ortholog); dendrite development (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN axonal growth cone (ortholog); cytoplasmic dynein complex (ortholog); cytoplasmic microtubule (ortholog) NW_004955439 3833525 3842393 + 102011912 AGCD01035690;GBDF01005833;XM_005390519 XP_005390576 MODEL 9008246 protein-coding LOC102024103 acrosomal protein SP-10-like NW_004955412 26731649 26733395 + 102024103 AGCD01013211;XM_005378471 XP_005378528 MODEL 8767050 ncrna LOC102014991 uncharacterized LOC102014991 NW_004955464 845950 891823 - 102014991 AGCD01049942;GBDI01160914;XR_001236694 MODEL 8979419 protein-coding LOC102019580 serpin B9-like NW_004955465 10259941 10270945 + 102019580 AGCD01050506;GBDI01306837;XM_005398910;XM_013521828;XM_013521829 XP_005398967;XP_013377282;XP_013377283 MODEL 10122869 protein-coding Atp5me ATP synthase membrane subunit e ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH heart disease (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955404 11420964 11421171 - 106149131 AGCD01003426;XM_013517042 XP_013372496 MODEL 8990296 protein-coding Trnt1 tRNA nucleotidyl transferase 1 ENCODES a protein that exhibits CCA tRNA nucleotidyltransferase activity (ortholog); CCACCA tRNA nucleotidyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial tRNA 3'-end processing (ortholog); rescue of stalled cytosolic ribosome (ortholog); tRNA 3'-terminal CCA addition (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); optic atrophy (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955421 10192065 10211527 - 102021249 AGCD01021870;GBBH01037146;XM_005383747;XM_005383748;XM_005383749 XP_005383804;XP_005383805;XP_005383806 MODEL 8915575 protein-coding Ada adenosine deaminase ENCODES a protein that exhibits 2'-deoxyadenosine deaminase activity (ortholog); adenosine deaminase activity (ortholog); deaminase activity (ortholog); INVOLVED IN adenosine catabolic process (ortholog); adenosine metabolic process (ortholog); AMP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenosine deaminase deficiency (ortholog); asthma (ortholog); autism spectrum disorder (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955445 12696096 12717488 + 102016959 AGCD01039761;GBBH01228991;XM_005392467 XP_005392524 MODEL 9066467 protein-coding Rerg RAS like estrogen regulated growth inhibitor ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); response to hormone (ortholog); ASSOCIATED WITH breast cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955413 11825235 11940390 - 102004687 AGCD01013973;AGCD01013974;AGCD01013975;AGCD01013976;GBCQ01095141;XM_005379016;XM_013511678 XP_005379073;XP_013367132 MODEL 8932746 protein-coding Adra2a adrenoceptor alpha 2A ENCODES a protein that exhibits adrenergic receptor activity (ortholog); alpha-1B adrenergic receptor binding (ortholog); alpha-2C adrenergic receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); dopaminergic synapse (ortholog) NW_004955485 384405 387332 - 102011547 AGCD01058445;AGCD01058446;GBDI01262926;XM_013504020 XP_013359474 MODEL 8902435 protein-coding Aldh1a2 aldehyde dehydrogenase 1 family member A2 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); retinal binding (ortholog); retinal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); anterior/posterior pattern specification (ortholog); blood vessel development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Coronary Occlusion (ortholog); Diaphragmatic Hernia 4 (ortholog); DiGeorge syndrome (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955450 16406578 16453048 + 102018142 AGCD01042843;AGCD01042844;GBCB01109320;XM_005393844;XM_005393845 XP_005393901;XP_005393902 MODEL 8849879 protein-coding LOC102010760 retinitis pigmentosa 9 protein NW_004955617 180456 193992 - 102010760 AGCD01077272;AGCD01077273;GBCE01004432;GBCE01098928;XM_013510144 XP_013365598 MODEL 8814556 protein-coding Carns1 carnosine synthase 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); carnosine synthase activity (ortholog); homocarnosine synthase activity (ortholog); INVOLVED IN carnosine biosynthetic process (ortholog); response to peptide (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway NW_004955422 18051721 18061500 - 102019281 AGCD01022936;GBDI01254744;XM_005384332;XM_005384333;XM_005384334;XM_013513938 XP_005384389;XP_005384390;XP_005384391;XP_013369392 MODEL 9032099 protein-coding Ptbp2 polypyrimidine tract binding protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); mRNA splice site recognition (ortholog); negative regulation of RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN growth cone (ortholog); neuronal cell body (ortholog); spliceosomal complex (ortholog) NW_004955435 1703588 1773016 + 102027223 AGCD01032752;AGCD01032753;GBCB01041750;GBDF01051639;XM_005388785;XM_013516507;XM_013516508;XM_013516509 XP_005388842;XP_013371961;XP_013371962;XP_013371963 MODEL 8936139 protein-coding Wdfy4 WDFY family member 4 INVOLVED IN antigen processing and presentation (ortholog); CD8-positive, alpha-beta T cell activation (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog) NW_004955556 1178970 1421139 - 102004981 AGCD01073187;AGCD01073188;AGCD01073189;AGCD01073190;AGCD01073191;AGCD01073192;AGCD01073193;AGCD01073194;GBDK01194697;XM_013508790;XM_013508791;XM_013508792;XM_013508793;XM_013508794;XM_013508795;XM_013508796;XM_013508797;XM_013508798 XP_013364244;XP_013364245;XP_013364246;XP_013364247;XP_013364248;XP_013364249;XP_013364250;XP_013364251;XP_013364252 MODEL 8975578 protein-coding Trim66 tripartite motif containing 66 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN chromocenter (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 24405986 24459729 - 102019264 AGCD01015545;AGCD01015546;GBDF01083727;XM_005380224;XM_013511881;XM_013511883;XM_013511884;XM_013511885;XM_013511886 XP_005380281;XP_013367335;XP_013367337;XP_013367338;XP_013367339;XP_013367340 MODEL 8977932 protein-coding LOC102021383 zinc finger protein 490-like NW_004955524 1463424 1483515 + 102021383 AGCD01068752;AGCD01068753;AGCD01068754;GBCE01072813;GBDI01292151;XM_005409482 XP_005409539 MODEL 39133898 misc_rna 7SK 7SK RNA 39132979 snrna U1 U1 spliceosomal RNA 9034835 protein-coding Fam222a family with sequence similarity 222 member A NW_004955455 8789064 8844080 - 102019140 AGCD01045910;GBCQ01092827;XM_013520493;XR_001236314 XP_013375947 MODEL 8823467 protein-coding Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); adipose tissue development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Colonic Neoplasms (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955435 22804484 22820807 - 102018322 AGCD01033520;GBCQ01032700;XM_005389089 XP_005389146 MODEL 9018284 protein-coding Tp53i11 tumor protein p53 inducible protein 11 NW_004955422 2829212 2833197 + 102022504 AGCD01022495;GBCB01113268;GBDF01308043;XM_013514200 XP_013369654 MODEL 8728972 pseudo LOC102012373 ubiquitin-conjugating enzyme E2 Q1 pseudogene NW_004955444 9094091 9096386 + 102012373 AGCD01038958 MODEL 8834040 protein-coding Baalc BAALC binder of MAP3K1 and KLF4 ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955417 27426764 27436620 + 102020913 AGCD01018555;AGCD01018556;GBCE01034603;GBDF01013252;XM_013512841 XP_013368295 MODEL 8964967 protein-coding Thoc7 THO complex subunit 7 INVOLVED IN mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955517 2037406 2046694 + 102020368 AGCD01067614;AGCD01067615;GBDF01082152;GBDI01068250;XM_013506938 XP_013362392 MODEL 8838452 protein-coding Ipmk inositol polyphosphate multikinase ENCODES a protein that exhibits 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); flavonoid binding (ortholog); inositol-1,3,4,5-tetrakisphosphate 6-kinase activity (ortholog); INVOLVED IN inositol phosphate biosynthetic process (ortholog); inositol trisphosphate metabolic process (ortholog); necroptotic process (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955425 11949849 12000610 - 102018847 AGCD01025496;GBDK01187137;XM_013514870;XM_013514871 XP_013370324;XP_013370325 MODEL 8802192 protein-coding Aph1a aph-1A gamma-secretase subunit ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid precursor protein metabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); gamma-secretase complex (ortholog) NW_004955413 506297 509787 + 102016038 AGCD01013472;GBBH01063314;XM_005378689 XP_005378746 MODEL 8727323 protein-coding LOC102005943 myoD family inhibitor domain-containing protein-like NW_004955421 17734841 17752220 + 102005943 AGCD01022030;XM_005383926 XP_005383983 MODEL 8889934 ncrna LOC102017232 uncharacterized LOC102017232 NW_004955477 6456388 6467350 + 102017232 AGCD01055610;GBDF01235237;XR_263661 MODEL 8896312 ncrna LOC102005186 uncharacterized LOC102005186 NW_004955553 939259 940745 - 102005186 AGCD01072866;GBDF01291522;XR_264933 MODEL 39134471 misc_rna 7SK 7SK RNA 9021137 pseudo LOC102003444 vesicle transport through interaction with t-SNAREs homolog 1B pseudogene NW_004955478 11045244 11049588 + 102003444 AGCD01056157 MODEL 9067657 protein-coding Ttc28 tetratricopeptide repeat domain 28 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); FOUND IN midbody (ortholog) NW_004955455 2322290 2964259 - 102021626 AGCD01045592;AGCD01045593;AGCD01045594;AGCD01045595;AGCD01045596;AGCD01045597;AGCD01045598;AGCD01045599;AGCD01045600;AGCD01045601;AGCD01045602;AGCD01045603;AGCD01045604;AGCD01045605;AGCD01045606;AGCD01045607;GBBH01113455;XM_013520304 XP_013375758 MODEL 8979305 protein-coding Fhl1 four and a half LIM domains 1 ENCODES a protein that exhibits channel activator activity (ortholog); potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH centronuclear myopathy (ortholog); diastolic heart failure (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955489 8888845 8944778 - 102014909 AGCD01060024;GBCQ01006174;XM_005404596;XM_005404598;XM_013504495;XM_013504496 XP_005404653;XP_005404655;XP_013359949;XP_013359950 MODEL 39134163 misc_rna 7SK 7SK RNA 8961756 protein-coding Sertad2 SERTA domain containing 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955424 19683745 19797889 + 102007134 AGCD01024833;AGCD01024834;AGCD01024835;AGCD01024836;AGCD01024837;GBDK01430460;XM_005385696;XM_005385698 XP_005385753;XP_005385755 MODEL 8877138 pseudo LOC102009977 inosine-5'-monophosphate dehydrogenase 2 pseudogene NW_004955516 3145206 3147423 - 102009977 AGCD01067484 MODEL 8730327 pseudo LOC102019899 ubiquitin-conjugating enzyme E2 variant 2 pseudogene NW_004955466 7207165 7207589 - 102019899 AGCD01050945 MODEL 8923657 ncrna LOC102022388 uncharacterized LOC102022388 NW_004955478 11128973 11130658 + 102022388 AGCD01056161;GBDF01005544;XR_263725;XR_263726 MODEL 8998376 protein-coding Dnah9 dynein axonemal heavy chain 9 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); mucociliary clearance (ortholog); ASSOCIATED WITH Cardiovascular Abnormalities (ortholog); congenital heart disease (ortholog); genetic disease (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955467 5357500 5677144 - 102027282 AGCD01051389;AGCD01051390;AGCD01051391;AGCD01051392;AGCD01051393;AGCD01051394;AGCD01051395;AGCD01051396;GBBH01035041;XM_005399350;XM_005399351;XM_005399353;XM_013522070;XM_013522071;XM_013522072 XP_005399407;XP_005399408;XP_005399410;XP_013377524;XP_013377525;XP_013377526 MODEL 9004030 ncrna LOC102018004 uncharacterized LOC102018004 NW_004955426 14561873 14580787 + 102018004 AGCD01026394;GBDF01280622;XR_261196 MODEL 10347517 protein-coding LOC106147089 receptor-type tyrosine-protein phosphatase gamma-like NW_004955517 3563925 3619511 - 106147089 AGCD01067659;AGCD01067660;AGCD01067661;AGCD01067662;AGCD01067663;GBDF01090397;XM_013506947 XP_013362401 MODEL 10200187 ncrna LOC106150069 uncharacterized LOC106150069 NW_004955463 6566436 6570948 + 106150069 AGCD01049684;GBCE01094774;XR_001236651 MODEL 8769850 protein-coding Asb4 ankyrin repeat and SOCS box containing 4 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of vasculogenesis (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog) NW_004955432 12078104 12137988 + 102018313 AGCD01030964;AGCD01030965;AGCD01030966;AGCD01030967;GBCB01024791;XM_005388065 XP_005388122 MODEL 9049236 protein-coding Cars1 cysteinyl-tRNA synthetase 1 ENCODES a protein that exhibits ATP binding (ortholog); cysteine-tRNA ligase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cysteinyl-tRNA aminoacylation (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH MICROCEPHALY, DEVELOPMENTAL DELAY, AND BRITTLE HAIR SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955422 14685356 14738420 - 102013620 AGCD01022863;AGCD01022864;GBCQ01150434;XM_005384221;XM_005384222;XM_013514108;XM_013514109 XP_005384278;XP_005384279;XP_013369562;XP_013369563 MODEL 9011363 pseudo LOC102021386 serine/threonine-protein phosphatase 4 regulatory subunit 3B pseudogene NW_004955531 3483082 3485616 + 102021386 AGCD01070075;XM_005410142 MODEL 8832391 protein-coding Cfp complement factor properdin INVOLVED IN complement activation, alternative pathway (ortholog); positive regulation of complement activation, alternative pathway (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); factor VIII deficiency (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic side of Golgi membrane (ortholog); extracellular space (ortholog); secretory granule (ortholog) NW_004955516 449993 455897 + 102015039 AGCD01067385;GBDJ01230368;XM_013506912;XM_013506913 XP_013362366;XP_013362367 MODEL 8799509 protein-coding Gcsaml germinal center associated signaling and motility like NW_004955581 770356 803012 + 102026371 AGCD01075694;AGCD01075695;AGCD01075696;GBDK01432789;XM_013509730 XP_013365184 MODEL 8712749 protein-coding Got1l1 glutamic-oxaloacetic transaminase 1 like 1 NW_004955463 13622781 13627165 - 102014990 AGCD01049876;GBDF01088565;XM_005398420;XM_005398421 XP_005398477;XP_005398478 MODEL 8964690 protein-coding Kidins220 kinase D interacting substrate 220 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein kinase regulator activity (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); dendrite morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); genetic disease (ortholog); Kabuki Syndrome 1 (ortholog); FOUND IN glutamatergic synapse (ortholog); late endosome (ortholog); postsynapse (ortholog) NW_004955487 782683 862079 + 102007667 AGCD01059231;AGCD01059232;AGCD01059233;AGCD01059234;GBDK01009188;XM_005404341;XM_005404344;XM_005404345;XM_013504353;XM_013504354;XM_013504355;XM_013504356 XP_005404398;XP_005404401;XP_005404402;XP_013359807;XP_013359808;XP_013359809;XP_013359810 MODEL 8758438 protein-coding Pde7a phosphodiesterase 7A ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); cyclic-nucleotide phosphodiesterase activity (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway NW_004955444 13349405 13475827 + 102019859 AGCD01039100;AGCD01039101;GBCE01012964;GBCE01012970;XM_005392162;XR_262266;XR_262267 XP_005392219 MODEL 8735738 protein-coding Baat bile acid-CoA:amino acid N-acyltransferase ENCODES a protein that exhibits glycine N-choloyltransferase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); medium-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); animal organ regeneration (ortholog); bile acid biosynthetic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); disease of metabolism (ortholog); Familial Hypercholanemia (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) NW_004955419 24469213 24521728 + 102009722 AGCD01020347;AGCD01020348;AGCD01020349;AGCD01020350;GBCQ01123350;XM_005382802;XM_005382803 XP_005382859;XP_005382860 MODEL 39131678 rrna 5S_rRNA 5S ribosomal RNA 8886344 pseudo LOC102006983 39S ribosomal protein L32, mitochondrial pseudogene NW_004955408 16943160 16949169 + 102006983 AGCD01008449 MODEL 8943144 protein-coding Ada2 adenosine deaminase 2 ENCODES a protein that exhibits adenosine deaminase activity (ortholog); adenosine receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adenosine catabolic process (ortholog); ASSOCIATED WITH ataxia telangiectasia (ortholog); Behcet's disease (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN extracellular space (ortholog) NW_004955454 5341822 5355383 - 102029825 AGCD01045149;AGCD01045150;AGCD01045151;GBCQ01016306;XM_005395969;XM_005395970;XM_013520005;XM_013520006;XR_001236207 XP_005396026;XP_005396027;XP_013375459;XP_013375460 MODEL 8709179 protein-coding Plcg2 phospholipase C gamma 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); phosphorylation-dependent protein binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); antifungal innate immune response (ortholog); B cell activation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); autoinflammation, antibody deficiency, and immune dysregulation syndrome (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intracellular vesicle (ortholog) NW_004955522 4352890 4480735 + 102007928 AGCD01068416;AGCD01068417;AGCD01068418;AGCD01068419;AGCD01068420;AGCD01068421;AGCD01068422;GBCE01092331;GBDJ01422643;XM_013507097 XP_013362551 MODEL 9046661 protein-coding Aldh1a3 aldehyde dehydrogenase 1 family member A3 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); NAD+ binding (ortholog); INVOLVED IN embryonic camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); face development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); isolated microphthalmia 8 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955416 27823611 27858112 + 102008530 AGCD01017621;AGCD01017622;GBCQ01034845;XM_005381642 XP_005381699 MODEL 8991668 protein-coding Adra2b adrenoceptor alpha 2B ENCODES a protein that exhibits adrenergic receptor activity (ortholog); alpha2-adrenergic receptor activity (ortholog); epinephrine binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH Cyanosis (ortholog); Diabetic Nephropathies (ortholog); diabetic neuropathy (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955470 3711075 3714450 - 102014443 AGCD01052708;AJ427271;GBCB01100329;XM_005400651;XM_005400652 CAD20309;XP_005400708;XP_005400709 MODEL 8714690 protein-coding Ttc29 tetratricopeptide repeat domain 29 INVOLVED IN cilium movement (ortholog); cilium organization (ortholog); ASSOCIATED WITH spermatogenic failure 42 (ortholog); spermatogenic failure 5 (ortholog); FOUND IN sperm flagellum (ortholog); sperm principal piece (ortholog) NW_004955428 2378498 2571246 - 102011464 AGCD01027633;AGCD01027634;AGCD01027635;GBBH01076528;XM_005386666;XM_013515339;XM_013515340 XP_005386723;XP_013370793;XP_013370794 MODEL 39133899 misc_rna 7SK 7SK RNA 8716593 protein-coding Hdgf heparin binding growth factor ENCODES a protein that exhibits actin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); heparin binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); negative regulation of neuron apoptotic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nucleoplasm (ortholog) NW_004955545 2819960 2831197 - 102009108 AGCD01071923;AGCD01071924;GBDI01008805;XM_005411700;XM_005411701 XP_005411757;XP_005411758 MODEL 9027340 pseudo LOC102014995 MAP/microtubule affinity-regulating kinase 3 pseudogene NW_004955412 12610452 12613209 - 102014995 AGCD01012822 MODEL 39132509 snrna U6 U6 spliceosomal RNA 9003011 pseudo LOC102012374 methyl-CpG-binding domain protein 3-like 2 pseudogene NW_004955563 759987 761698 + 102012374 AGCD01074086;XM_005413203 MODEL 9063343 protein-coding Fam222b family with sequence similarity 222 member B FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955481 4334174 4406528 + 102020116 AGCD01056935;AGCD01056936;GBDF01121302;XM_005402710;XM_005402711;XM_005402712;XM_005402713 XP_005402767;XP_005402768;XP_005402769;XP_005402770 MODEL 8965566 protein-coding Dynlt2 dynein light chain Tctex-type 2 NW_004955411 3866312 3903862 + 102020225 AGCD01011556;AGCD01011557;AGCD01011558;AGCD01011559;AGCD01011560;AGCD01011561;GBDF01080138;XM_005377635 XP_005377692 MODEL 9015446 protein-coding Bicd1 BICD cargo adaptor 1 ENCODES a protein that exhibits cytoskeletal anchor activity (ortholog); dynactin binding (ortholog); dynein complex binding (ortholog); INVOLVED IN microtubule anchoring at microtubule organizing center (ortholog); minus-end-directed organelle transport along microtubule (ortholog); negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN centrosome (ortholog); cytoplasmic microtubule (ortholog); cytoplasmic vesicle (ortholog) NW_004955505 3330933 3544752 - 102027765 AGCD01065020;AGCD01065021;AGCD01065022;AGCD01065023;AGCD01065024;AGCD01065025;AGCD01065026;AGCD01065027;AGCD01065028;AGCD01065029;AGCD01065030;GBBH01167340;GBDJ01318423;XM_005407175 XP_005407232 MODEL 39134472 misc_rna 7SK 7SK RNA 8840490 protein-coding Aph1b aph-1B gamma-secretase subunit ENCODES a protein that exhibits endopeptidase activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); locomotory behavior (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); coronary artery disease (ortholog); HIV Seropositivity (ortholog); FOUND IN gamma-secretase complex (ortholog); membrane (ortholog); transport vesicle (ortholog) NW_004955450 12000682 12022183 - 102027596 AGCD01042686;GBDF01044997;XM_005393791;XM_013518982;XM_013518983 XP_005393848;XP_013374436;XP_013374437 MODEL 8899332 protein-coding Thop1 thimet oligopeptidase 1 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); peptidase activity (ortholog); peptide binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); peptide catabolic process (ortholog); peptide metabolic process (ortholog); FOUND IN cytosol (ortholog) NW_004955495 5055389 5070710 + 102019711 AGCD01061973;GBDF01128633;XM_005405835 XP_005405892 MODEL 9007012 pseudo LOC102009982 ADP-ribosylation factor-like protein 5A NW_004955435 20926678 20927274 - 102009982 AGCD01033467 MODEL 39132981 snrna U1 U1 spliceosomal RNA 8984583 protein-coding Trim67 tripartite motif containing 67 INVOLVED IN negative regulation of Ras protein signal transduction (ortholog); positive regulation of neuron projection development (ortholog); positive regulation of ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) NW_004955492 7538492 7578257 - 102009850 AGCD01060800;GBDI01166263;XM_005404980;XM_005404981;XM_013504687;XM_013504688 XP_005405037;XP_005405038;XP_013360141;XP_013360142 MODEL 8950239 protein-coding LOC102018007 unconventional myosin-XVB-like NW_004955506 6612784 6644900 - 102018007 AGCD01065432;GBCE01126793;GBDI01245097;XM_005407496 XP_005407553 MODEL 10083655 protein-coding Adrb1 adrenoceptor beta 1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); amine binding (ortholog); beta1-adrenergic receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Anaphylaxis (ortholog); Angina Pectoris (ortholog); aortic valve stenosis (ortholog); FOUND IN early endosome (ortholog); membrane (ortholog); neuronal dense core vesicle (ortholog) NW_004955431 19025663 19027026 + 106148883 AGCD01030439;GBBH01188166;GBDI01054371;XM_013515887 XP_013371341 MODEL 8885877 pseudo LOC102019582 angio-associated migratory cell protein-like NW_004955466 6148040 6157739 + 102019582 AGCD01050911 MODEL 9050522 protein-coding Dnai1 dynein axonemal intermediate chain 1 INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); FOUND IN 9+2 motile cilium (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955472 1599265 1668214 - 102014236 AGCD01053403;AGCD01053404;AGCD01053405;AGCD01053406;AGCD01053407;AGCD01053408;AGCD01053409;GBBH01062174;GBCE01133976;XM_013522970 XP_013378424 MODEL 9017465 trna trnV(tac) tRNA-Val MT 1021 1087 + 15822216 39133280 snrna U4 U4 spliceosomal RNA 8791822 protein-coding Atp5mf ATP synthase membrane subunit f ENCODES a protein that exhibits proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955460 15129651 15136722 - 102010455 AGCD01048768;GBCE01002331;XM_005397947 XP_005398004 MODEL 8844157 protein-coding LOC102017244 zinc finger protein 878-like NW_004955487 192974 209169 - 102017244 AGCD01059214;GBBH01045988;XM_013504335 XP_013359789 MODEL 8836856 protein-coding Rergl RERG like ASSOCIATED WITH prostate cancer (ortholog) NW_004955413 14324734 14334992 - 102010353 AGCD01014040;GBDJ01387403;XM_005379035;XM_005379036 XP_005379092;XP_005379093 MODEL 8753358 protein-coding LOC102005187 zinc finger protein 432 NW_004955558 575848 589065 - 102005187 AGCD01073376;GBCE01115771;XM_005412661 XP_005412718 MODEL 8873928 protein-coding LOC102019587 taste receptor type 2 member 7-like NW_004955413 6997395 7003912 + 102019587 AGCD01013788;XM_005379616 XP_005379673 MODEL 39134164 misc_rna 7SK 7SK RNA 8988791 protein-coding Wdhd1 WD repeat and HMG-box DNA binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); RNA binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN pericentric heterochromatin organization (ortholog); regulation of chromosome organization (ortholog); RNA processing (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleoplasm (ortholog) NW_004955409 8539617 8587537 + 102028723 AGCD01009420;GBDF01249434;XM_005376757;XM_005376758 XP_005376814;XP_005376815 MODEL 8733717 protein-coding Dynlt2b dynein light chain Tctex-type 2B ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); Short-Rib Thoracic Dysplasia 17 with or without Polydactyly (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary base (ortholog) NW_004955420 12515195 12528863 - 102011449 AGCD01020868;AGCD01020869;AGCD01020870;GBDF01081244;XM_005383130;XM_013513399 XP_005383187;XP_013368853 MODEL 39131679 rrna 5S_rRNA 5S ribosomal RNA 9046532 protein-coding Kif11 kinesin family member 11 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN mitotic centrosome separation (ortholog); mitotic spindle assembly (ortholog); regulation of mitotic centrosome separation (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); autosomal dominant intellectual developmental disorder 21 (ortholog); Chromosomal Instability (ortholog); FOUND IN cytosol (ortholog); microtubule (ortholog); protein-containing complex (ortholog) NW_004955425 764382 804856 - 102006047 AGCD01025201;AGCD01025202;GBDI01293707;XM_005385823 XP_005385880 MODEL 8939963 protein-coding Fhl2 four and a half LIM domains 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN atrial cardiac muscle cell development (ortholog); heart trabecula formation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN actin cytoskeleton (ortholog); focal adhesion (ortholog); M band (ortholog) NW_004955470 10240117 10286117 - 102028405 AGCD01052859;AGCD01052860;GBCQ01085852;XM_005400786;XM_005400787;XM_005400788;XM_013522764;XM_013522765 XP_005400843;XP_005400844;XP_005400845;XP_013378218;XP_013378219 MODEL 8907281 ncrna LOC102019901 uncharacterized LOC102019901 NW_004955468 1148115 1152636 + 102019901 AGCD01051758;GBDF01109347;XR_001236910;XR_001236911 MODEL 8991425 protein-coding Ptbp3 polypyrimidine tract binding protein 3 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); negative regulation of RNA splicing (ortholog); regulation of cell differentiation (ortholog) NW_004955419 15002780 15101588 + 102005474 AGCD01020055;AGCD01020056;AGCD01020057;GBDF01088480;GBDF01088481;XM_013513256;XM_013513257;XM_013513258;XM_013513259 XP_013368710;XP_013368711;XP_013368712;XP_013368713 MODEL 8916423 pseudo LOC102024104 mth938 domain-containing protein pseudogene NW_004955466 13831017 13831425 + 102024104 AGCD01051187 MODEL 39132316 rrna 5S_rRNA 5S ribosomal RNA 8721316 protein-coding Hmgn1 high mobility group nucleosome binding domain 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN chromatin organization (ortholog); post-embryonic camera-type eye morphogenesis (ortholog); pyrimidine dimer repair by nucleotide-excision repair (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Neoplastic Cell Transformation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 38136386 38142587 - 102019775 AGCD01007796;GBDF01047791;XM_005375983 XP_005376040 MODEL 10336146 ncrna LOC106147090 uncharacterized LOC106147090 NW_004955517 3738386 3760814 + 106147090 AGCD01067676;AGCD01067677;AGCD01067678;AGCD01067679;AGCD01067680;GBDF01155331;XR_001231825 MODEL 8873421 protein-coding Aldh1b1 aldehyde dehydrogenase 1 family member B1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN ethanol catabolic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; ASSOCIATED WITH cholestasis (ortholog); Colonic Neoplasms (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955419 28155174 28159752 - 102027529 AGCD01020460;GBBH01110885;XM_005382856 XP_005382913 MODEL 8821282 protein-coding Ttc3 tetratricopeptide repeat domain 3 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein K48-linked ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Frontotemporal Dementia and/or Amyotrophic Lateral Sclerosis (ortholog); FOUND IN nucleus (ortholog); vacuole (ortholog) NW_004955407 36175312 36307250 + 102014212 AGCD01007760;AGCD01007761;AGCD01007762;AGCD01007763;GBDF01251910;XM_013504664;XM_013504667;XM_013504668;XM_013504669;XM_013504671;XM_013504674 XP_013360118;XP_013360121;XP_013360122;XP_013360123;XP_013360125;XP_013360128 MODEL 8722933 ncrna LOC102021390 uncharacterized LOC102021390 NW_004955539 3561889 3568046 + 102021390 AGCD01071257;GBDI01058745;XR_264814 MODEL 8721613 ncrna LOC102003450 uncharacterized LOC102003450 NW_004955485 6812985 6814556 - 102003450 AGCD01058629;GBDF01041975;XR_263914 MODEL 9019974 protein-coding Hdgfl1 HDGF like 1 NW_004955483 4215060 4217150 - 102013507 AGCD01057734;GBDF01009191;XM_005403378 XP_005403435 MODEL 8846637 protein-coding Cars2 cysteinyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits cysteine-tRNA ligase activity (ortholog); INVOLVED IN cysteinyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 27 (ortholog); genetic disease (ortholog); maturity-onset diabetes of the young type 2 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955404 2008980 2027672 + 102019882 AGCD01003245;GBDI01083094;GBDJ01088737;XM_013515749 XP_013371203 MODEL 8783733 protein-coding Asb5 ankyrin repeat and SOCS box containing 5 NW_004955403 31498343 31537605 + 102016870 AGCD01002420;AGCD01002421;GBDF01231618;XM_005373516;XM_005373517;XM_005373518 XP_005373573;XP_005373574;XP_005373575 MODEL 9007908 protein-coding Cftr CF transmembrane conductance regulator ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP hydrolysis activity (ortholog); bicarbonate transmembrane transporter activity (ortholog); INVOLVED IN amelogenesis (ortholog); bicarbonate transport (ortholog); cellular response to anoxia (ortholog); ASSOCIATED WITH alcoholic pancreatitis (ortholog); allergic bronchopulmonary aspergillosis (ortholog); Alzheimer's disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955432 23179645 23328347 + 102016737 AGCD01031282;AGCD01031283;GBBH01149524;XM_005388136;XM_013515961 XP_005388193;XP_013371415 MODEL 8810882 protein-coding Fam227a family with sequence similarity 227 member A NW_004955413 24732478 24780909 - 102020996 AGCD01014378;AGCD01014379;GBDF01187832;XM_005379262;XM_013511491 XP_005379319;XP_013366945 MODEL 8965356 protein-coding Got2 glutamic-oxaloacetic transaminase 2 ENCODES a protein that exhibits amino acid binding (ortholog); carboxylic acid binding (ortholog); enzyme binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); dicarboxylic acid metabolic process (ortholog); fatty acid transport (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; ASSOCIATED WITH acute kidney failure (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 82 (ortholog); FOUND IN cell surface (ortholog); mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog) NW_004955433 16121795 16145129 - 102013328 AGCD01031786;AGCD01031787;GBBH01062044;GBDJ01075997;XM_013516232 XP_013371686 MODEL 39134473 misc_rna 7SK 7SK RNA 8931538 protein-coding Resf1 retroelement silencing factor 1 ENCODES a protein that exhibits histone methyltransferase binding (ortholog); INVOLVED IN response to bacterium (ortholog); transposable element silencing by heterochromatin formation (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955505 3684848 3709624 - 102011340 AGCD01065047;GBDJ01085100;XM_005407130;XM_005407131;XM_013505939 XP_005407187;XP_005407188;XP_013361393 MODEL 8842899 protein-coding Babam1 BRISC and BRCA1 A complex member 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); hematopoietic stem cell proliferation (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955524 939250 944457 - 102005169 AGCD01068730;GBCE01029546;XM_005409520;XM_005409521;XM_005409522;XM_005409523 XP_005409577;XP_005409578;XP_005409579;XP_005409580 MODEL 8886810 protein-coding Pde7b phosphodiesterase 7B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH prostate cancer (ortholog) NW_004955439 686197 985591 - 102025844 AGCD01035593;AGCD01035594;AGCD01035595;GBCE01171155;XM_005390481;XM_005390482;XM_005390484;XM_013517377;XM_013517378 XP_005390538;XP_005390539;XP_005390541;XP_013372831;XP_013372832 MODEL 10248280 ncrna LOC106150070 uncharacterized LOC106150070 NW_004955402 15617190 15625928 - 106150070 AGCD01000460;GBCQ01183809;XR_001236654 MODEL 8700530 protein-coding Tp53i13 tumor protein p53 inducible protein 13 INVOLVED IN negative regulation of cell cycle (ortholog); response to UV (ortholog); response to xenobiotic stimulus (ortholog); FOUND IN cytoplasm (ortholog) NW_004955481 3681495 3685051 - 102010584 AGCD01056911;GBCE01029826;XM_005402678 XP_005402735 MODEL 8872107 ncrna LOC102009985 uncharacterized LOC102009985 NW_004955532 2292201 2295717 + 102009985 AGCD01070223;GBDF01097912;XR_264728 MODEL 8763266 protein-coding Ipo11 importin 11 NW_004955446 6034277 6225627 - 102025188 AGCD01040085;AGCD01040086;AGCD01040087;AGCD01040088;AGCD01040089;AGCD01040090;GBCQ01123362;XM_005392641;XM_013518422 XP_005392698;XP_013373876 MODEL 9060925 protein-coding Thpo thrombopoietin ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); megakaryocyte development (ortholog); megakaryocyte differentiation (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); arteriosclerosis obliterans (ortholog); cardiomyopathy (ortholog); FOUND IN extracellular space (ortholog) NW_004955420 23120828 23128894 + 102017242 AGCD01021227;AGCD01021228;GBDJ01109659;XM_005383308;XM_005383309;XM_005383310;XM_013513327;XM_013513328;XM_013513329 XP_005383365;XP_005383366;XP_005383367;XP_013368781;XP_013368782;XP_013368783 MODEL 8880671 ncrna LOC102014996 uncharacterized LOC102014996 NW_004955413 9267358 9269661 + 102014996 AGCD01013902;XR_260072 MODEL 8708381 pseudo LOC102010762 RNA-binding protein 3 pseudogene NW_004955403 33567014 33567530 + 102010762 AGCD01002457 MODEL 39132321 rrna 5S_rRNA 5S ribosomal RNA 39132510 snrna U6 U6 spliceosomal RNA 8993516 pseudo LOC102012375 stathmin-2 pseudogene NW_004955568 690849 691813 + 102012375 AGCD01074525;XM_005413457 MODEL 8985997 protein-coding Adrb2 adrenoceptor beta 2 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); amyloid-beta binding (ortholog); B2 bradykinin receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); PARTICIPATES IN adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH acute kidney failure (ortholog); AIDS Dementia Complex (ortholog); Angina Pectoris (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); caveola (ortholog) NW_004955415 5515157 5517198 - 102003962 AGCD01015995;GBBH01126394;XM_005380632 XP_005380689 MODEL 8731356 protein-coding Gcsh glycine cleavage system protein H ENCODES a protein that exhibits aminomethyltransferase activity (ortholog); enzyme binding (ortholog); INVOLVED IN glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); genetic disease (ortholog); glycine encephalopathy (ortholog); FOUND IN mitochondrion (ortholog) NW_004955522 3858156 3869730 - 102007584 AGCD01068401;AGCD01068402;GBCE01077313;GBDJ01228720;XM_013507109 XP_013362563 MODEL 9018754 protein-coding Sertad3 SERTA domain containing 3 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) NW_004955578 837686 841561 + 102012380 AGCD01075499;GBDF01122108;XM_005414045 XP_005414102 MODEL 39133283 snrna U4 U4 spliceosomal RNA 8931531 protein-coding Atp5mg ATP synthase membrane subunit g ENCODES a protein that exhibits proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955412 19555736 19563094 + 102009924 AGCD01012962;AGCD01012963;GBDF01009030;XM_005378241 XP_005378298 MODEL 39134165 misc_rna 7SK 7SK RNA 39134474 misc_rna 7SK 7SK RNA 39133900 misc_rna 7SK 7SK RNA 8738867 pseudo LOC102005947 protein FAM72A-like NW_004955497 509767 511648 - 102005947 AGCD01062421 MODEL 8999932 protein-coding Trim69 tripartite motif containing 69 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein localization to centrosome (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955409 8376449 8394651 - 102024980 AGCD01009402;AGCD01009403;AGCD01009404;AGCD01009405;AGCD01009406;GBDF01053402;XM_005376746 XP_005376803 MODEL 8874890 protein-coding LOC102018009 anthrax toxin receptor-like NW_004955510 6344262 6376039 + 102018009 AGCD01066305;AGCD01066306;GBDJ01209437;XM_005407924;XM_005407925;XM_005407926;XM_005407927;XM_013506336 XP_005407981;XP_005407982;XP_005407983;XP_005407984;XP_013361790 MODEL 8740324 pseudo LOC102006984 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955458 70428 74229 + 102006984 AGCD01047106;XM_005397126 MODEL 8727717 protein-coding Aldh1l1 aldehyde dehydrogenase 1 family member L1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NADP+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); folic acid metabolic process (ortholog); NADPH regeneration (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955421 21420264 21506004 - 102018736 AGCD01022109;AGCD01022110;AGCD01022111;GBDJ01084830;XM_005383830 XP_005383887 MODEL 9042999 protein-coding Dnai2 dynein axonemal intermediate chain 2 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN 9+2 motile cilium (ortholog); axonemal dynein complex (ortholog); axoneme (ortholog) NW_004955553 1188279 1212053 + 102006501 AGCD01072872;GBDF01087219;XM_005412227;XM_005412229;XM_013508632;XM_013508633 XP_005412284;XP_005412286;XP_013364086;XP_013364087 MODEL 8706350 pseudo LOC102005191 WW domain-binding protein 5-like NW_004955445 15861773 15862606 + 102005191 AGCD01039857 MODEL 8960934 pseudo LOC102022391 sorting nexin-2 pseudogene NW_004955418 10862123 10863224 + 102022391 AGCD01018988 MODEL 8745906 protein-coding Api5 apoptosis inhibitor 5 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of fibroblast apoptotic process (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955422 4121913 4149242 - 102026756 AGCD01022533;AGCD01022534;GBDF01003742;XM_005384088;XM_005384089 XP_005384145;XP_005384146 MODEL 9057121 protein-coding Adrb3 adrenoceptor beta 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); beta-adrenergic receptor activity (ortholog); beta3-adrenergic receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH Alzheimer's disease (ortholog); colitis (ortholog); congestive heart failure (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); receptor complex (ortholog) NW_004955463 13663064 13665553 - 102015487 AGCD01049880;GBDJ01253959;XM_005398422 XP_005398479 MODEL 8840137 protein-coding Adad1 adenosine deaminase domain containing 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN spermatid development (ortholog); FOUND IN nucleus (ortholog) NW_004955428 18190927 18220361 - 102015426 AGCD01028058;GBDF01008505;XM_005386771;XM_005386772;XM_005386773 XP_005386828;XP_005386829;XP_005386830 MODEL 8990237 pseudo LOC102019588 40S ribosomal protein S16 pseudogene NW_004955469 3930223 3930657 - 102019588 AGCD01052310 MODEL 9022999 protein-coding Asb6 ankyrin repeat and SOCS box containing 6 NW_004955570 1747965 1752728 - 102021059 AGCD01074828;GBCQ01122581;XM_005413630;XM_005413631;XM_005413634 XP_005413687;XP_005413688;XP_005413691 MODEL 8855409 protein-coding Wdpcp WD repeat containing planar cell polarity effector ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN auditory receptor cell morphogenesis (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 15 (ortholog); FOUND IN axonemal basal plate (ortholog) NW_004955424 20723592 21114801 + 102012774 AGCD01024871;AGCD01024872;AGCD01024873;AGCD01024874;AGCD01024875;AGCD01024876;AGCD01024877;AGCD01024878;AGCD01024879;AGCD01024880;AGCD01024881;AGCD01024882;AGCD01024883;AGCD01024884;AGCD01024885;AGCD01024886;AGCD01024887;AGCD01024888;AGCD01024889;AGCD01024890;AGCD01024891;AGCD01024892;AGCD01024893;GBDF01160193;XM_005385716;XM_005385718;XM_005385719;XM_005385720;XM_013514679;XM_013514680;XM_013514681;XM_013514682;XM_013514683;XM_013514684;XM_013514685;XM_013514686 XP_005385773;XP_005385775;XP_005385776;XP_005385777;XP_013370133;XP_013370134;XP_013370135;XP_013370136;XP_013370137;XP_013370138;XP_013370139;XP_013370140 MODEL 8826099 ncrna LOC102019903 uncharacterized LOC102019903 NW_004955469 5019919 5020907 - 102019903 AGCD01052342;GBDF01177369;XR_263430 MODEL 9041395 protein-coding LOC102024105 T-cell surface glycoprotein CD1b2-like NW_004955468 10193294 10196217 + 102024105 AGCD01052071;XM_005400146;XM_005400147 XP_005400203;XP_005400204 MODEL 8907648 protein-coding Dynlt3 dynein light chain Tctex-type 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of mitotic cell cycle (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN cytoplasmic dynein complex (ortholog); kinetochore (ortholog); mitotic spindle astral microtubule (ortholog) NW_004955587 828730 838614 - 102012384 AGCD01076070;GBBH01004194;XM_005414452 XP_005414509 MODEL 8939535 protein-coding Kif12 kinesin family member 12 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of fatty acid biosynthetic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); metabolic dysfunction-associated steatohepatitis (ortholog); Progressive Familial Intrahepatic Cholestasis 8 (ortholog); FOUND IN cilium (ortholog); extracellular exosome (ortholog); microtubule organizing center (ortholog) NW_004955419 13463861 13470703 + 102014782 AGCD01020003;GBDK01006201;XM_005382645;XM_005382646;XM_005382647;XM_005382648;XM_005382649;XM_005382650;XM_005382652;XM_005382653;XM_005382654;XM_005382655;XM_013513275;XM_013513276;XM_013513278;XR_260626;XR_260627 XP_005382702;XP_005382703;XP_005382704;XP_005382705;XP_005382706;XP_005382707;XP_005382709;XP_005382710;XP_005382711;XP_005382712;XP_013368729;XP_013368730;XP_013368732 MODEL 9006063 protein-coding Ptcd2 pentatricopeptide repeat domain 2 INVOLVED IN heart development (ortholog); kidney development (ortholog); liver development (ortholog); FOUND IN mitochondrion (ortholog) NW_004955575 1126978 1156727 + 102004763 AGCD01075233;GBDJ01350323;XM_005413937;XM_005413938;XM_013509609 XP_005413994;XP_005413995;XP_013365063 MODEL 8881677 protein-coding Tp53i3 tumor protein p53 inducible protein 3 ENCODES a protein that exhibits quinone reductase (NADPH) activity (ortholog); INVOLVED IN apoptotic process (ortholog); reactive oxygen species biosynthetic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autism spectrum disorder (ortholog); carcinoma (ortholog) NW_004955469 6287442 6298944 - 102028848 AGCD01052377;AGCD01052378;AGCD01052379;GBDF01149068;XM_005400567 XP_005400624 MODEL 10372038 ncrna LOC106150071 uncharacterized LOC106150071 NW_004955463 7134697 7135321 - 106150071 AGCD01049719;GBBH01172741;XR_001236653 MODEL 9060584 trna trnW(tca) tRNA-Trp MT 4942 5010 + 15822204 8866073 protein-coding Bicd2 BICD cargo adaptor 2 ENCODES a protein that exhibits dynactin binding (ortholog); dynein complex binding (ortholog); dynein light intermediate chain binding (ortholog); INVOLVED IN centrosome localization (ortholog); microtubule anchoring at microtubule organizing center (ortholog); microtubule-based movement (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autosomal dominant distal hereditary motor neuronopathy (ortholog); FOUND IN annulate lamellae (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955515 5060176 5105298 + 102025831 AGCD01067337;AGCD01067338;GBCE01133926;XM_005408901;XM_005408902 XP_005408958;XP_005408959 MODEL 8771338 pseudo LOC102005948 coiled-coil domain-containing protein 152-like NW_004955424 19596277 19597238 - 102005948 AGCD01024830 MODEL 10325184 ncrna LOC106147091 uncharacterized LOC106147091 NW_004955518 1027892 1038741 - 106147091 AGCD01067755;GBBH01168264;XR_001231831 MODEL 8975117 protein-coding Ttc31 tetratricopeptide repeat domain 31 NW_004955424 11297666 11304937 - 102025813 AGCD01024561;GBDK01014863;XM_005385498;XM_005385499;XM_005385500;XM_013514655;XM_013514656 XP_005385555;XP_005385556;XP_005385557;XP_013370109;XP_013370110 MODEL 8970631 ncrna LOC102003456 uncharacterized LOC102003456 NW_004955492 6404109 6413616 + 102003456 AGCD01060766;GBDF01016640;XR_001231259;XR_001231260;XR_264055 MODEL 8827763 protein-coding Cartpt CART prepropeptide INVOLVED IN adult feeding behavior (ortholog); behavioral response to cocaine (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); neuronal cell body (ortholog) NW_004955575 551991 555118 + 102030255 AGCD01075225;GBDJ01159042;XM_005413933 XP_005413990 MODEL 39132514 snrna U6 U6 spliceosomal RNA 8881823 protein-coding Hdgfl2 HDGF like 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K27me3 reader activity (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); muscle cell differentiation (ortholog); positive regulation of cell growth (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 4426929 4447276 - 102006928 AGCD01061922;AGCD01061923;GBDF01087580;GBDK01016904;XM_013505188;XM_013505189;XM_013505190 XP_013360642;XP_013360643;XP_013360644 MODEL 8772237 protein-coding Thra thyroid hormone receptor alpha ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adrenal gland development (ortholog); animal organ morphogenesis (ortholog); cartilage condensation (ortholog); ASSOCIATED WITH breast cancer (ortholog); congenital nongoitrous hypothyroidism 6 (ortholog); Diaphragmatic Hernia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955451 14731746 14743545 + 102009675 AGCD01043569;AGCD01043570;GBCB01002160;XM_005394347 XP_005394404 MODEL 9011401 protein-coding Cga glycoprotein hormones, alpha polypeptide ENCODES a protein that exhibits follicle-stimulating hormone activity (ortholog); hormone activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); developmental growth (ortholog); follicle-stimulating hormone secretion (ortholog); PARTICIPATES IN follicle-stimulating hormone signaling pathway; luteinizing hormone signaling pathway; ASSOCIATED WITH adrenal gland disease (ortholog); atrial fibrillation (ortholog); breast cancer (ortholog); FOUND IN extracellular space (ortholog); follicle-stimulating hormone complex (ortholog) NW_004955411 14092743 14168297 - 102023341 AGCD01011908;AGCD01011909;GBDF01173117;XM_005377714 XP_005377771 MODEL 8937460 protein-coding Fam227b family with sequence similarity 227 member B NW_004955409 4568562 4769010 + 102008294 AGCD01009292;AGCD01009293;AGCD01009294;AGCD01009295;AGCD01009296;GBDF01081662;XM_005376688;XM_005376689;XM_013510294 XP_005376745;XP_005376746;XP_013365748 MODEL 9050250 protein-coding Trim7 tripartite motif containing 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955530 119088 128353 + 102003481 AGCD01069830;GBDK01397066;XM_005410097;XM_005410098 XP_005410154;XP_005410155 MODEL 8738421 protein-coding Resp18 regulated endocrine specific protein 18 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); hypertension (ortholog); renal fibrosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); perikaryon (ortholog); rough endoplasmic reticulum lumen (ortholog) NW_004955453 14106430 14111920 + 102008493 AGCD01044858;GBDI01385707;XM_005395532 XP_005395589 MODEL 9022110 protein-coding Fhl3 four and a half LIM domains 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN nucleus (ortholog); stress fiber (ortholog); Z disc (ortholog) NW_004955452 15718832 15721697 - 102016662 AGCD01044495;GBDF01276712;GBDK01320683;XM_013519692 XP_013375146 MODEL 8883236 protein-coding Gp1ba glycoprotein Ib platelet subunit alpha INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); cell adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH autoimmune thrombocytopenic purpura (ortholog); bacterial pneumonia (ortholog); Bernard-Soulier syndrome (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955467 10333537 10347488 + 102020435 AGCD01051560;AGCD01051561;GBBH01027297;XM_005399617;XM_013522074 XP_005399674;XP_013377528 MODEL 153211024 protein-coding ADRB3 adrenoceptor beta 3 8994347 protein-coding Hmgn2 high mobility group nucleosomal binding domain 2 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of development, heterochronic (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome type 1 (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nucleolus (ortholog) NW_004955452 5846085 5849996 + 102018679 AGCD01044058;AGCD01044059;GBBH01004594;XM_005394861 XP_005394918 MODEL 8923889 protein-coding Babam2 BRISC and BRCA1 A complex member 2 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); tumor necrosis factor receptor binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955469 9831488 10246631 + 102009707 AGCD01052517;AGCD01052518;AGCD01052519;AGCD01052520;AGCD01052521;AGCD01052522;AGCD01052523;AGCD01052524;AGCD01052525;AGCD01052526;AGCD01052527;AGCD01052528;AGCD01052529;GBCQ01036978;XM_005400518;XM_005400519;XM_013522605;XR_263443 XP_005400575;XP_005400576;XP_013378059 MODEL 39133901 misc_rna 7SK 7SK RNA 8903019 pseudo LOC102017245 sentrin-specific protease 6-like NW_004955422 15139959 15144979 - 102017245 AGCD01022876 MODEL 8795468 protein-coding Ipo13 importin 13 ENCODES a protein that exhibits nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN protein import into nucleus (ortholog) NW_004955537 3472866 3494552 + 102007936 AGCD01070959;GBCE01099023;XM_005410689;XM_013507752 XP_005410746;XP_013363206 MODEL 9067132 ncrna LOC102021391 uncharacterized LOC102021391 NW_004955542 1478570 1495492 + 102021391 AGCD01071504;GBCE01185531;XR_001232169;XR_001232170;XR_264854;XR_264855 MODEL 8752355 pseudo LOC102010765 protein FAM133B pseudogene NW_004955405 3393161 3394490 + 102010765 AGCD01004634 MODEL 39132325 rrna 5S_rRNA 5S ribosomal RNA 9061563 protein-coding LOC102014998 cytochrome b-c1 complex subunit Rieske, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); respiratory electron transport chain (ortholog); response to hormone (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Experimental Seizures (ortholog); lactic acidosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955468 8331153 8338628 + 102014998 AGCD01052024;GBDI01158950;XM_005400118 XP_005400175 MODEL 8740331 ncrna LOC102006991 uncharacterized LOC102006991 NW_004955463 9497759 9499164 + 102006991 AGCD01049785;XR_263164 MODEL 39133285 snrna U4 U4 spliceosomal RNA 39132983 snrna U1 U1 spliceosomal RNA 8880742 protein-coding Sertad4 SERTA domain containing 4 FOUND IN nucleoplasm (ortholog) NW_004955489 1947819 1958434 - 102019070 AGCD01059855;AGCD01059856;GBBH01121747;GBDJ01175985;XM_005404520 XP_005404577 MODEL 8927721 ncrna LOC102022402 uncharacterized LOC102022402 NW_004955423 16824211 16829887 + 102022402 AGCD01023839;GBDF01074436;XR_001234119;XR_260973 MODEL 8828792 protein-coding Ttc32 tetratricopeptide repeat domain 32 NW_004955469 2461559 2466793 - 102011105 AGCD01052276;GBDF01194304;XM_005400338 XP_005400395 MODEL 39134166 misc_rna 7SK 7SK RNA 39134475 misc_rna 7SK 7SK RNA 8794718 protein-coding Wdr1 WD repeat domain 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament fragmentation (ortholog); apical junction assembly (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant intellectual developmental disorder 61 (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955549 2640193 2674818 + 102012586 AGCD01072480;GBCQ01034784;GBDJ01009712;XM_013508539 XP_013363993 MODEL 9011031 protein-coding LOC102009987 trem-like transcript 4 protein NW_004955437 7799753 7806865 - 102009987 AGCD01034469;GBBH01047078;XM_005389681;XM_013517047;XM_013517048 XP_005389738;XP_013372501;XP_013372502 MODEL 39134167 misc_rna 7SK 7SK RNA 39134476 misc_rna 7SK 7SK RNA 8959217 protein-coding Dynlt4 dynein light chain Tctex-type 4 ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955464 13417735 13419646 + 102007316 AGCD01050275;GBDI01118775;XM_005398725;XM_005398726;XM_005398727 XP_005398782;XP_005398783;XP_005398784 MODEL 9032181 pseudo LOC102005195 arylacetamide deacetylase-like NW_004955448 2874204 2882455 - 102005195 AGCD01041291 MODEL 8708647 protein-coding Gda guanine deaminase ENCODES a protein that exhibits guanine deaminase activity (ortholog); INVOLVED IN deoxyguanosine catabolic process (ortholog); dGMP catabolic process (ortholog); GMP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); postsynapse (ortholog); postsynaptic cytosol (ortholog) NW_004955434 983388 1050413 - 102019310 AGCD01032047;AGCD01032048;AGCD01032049;AGCD01032050;GBBH01187473;GBCB01101187;XM_005388518 XP_005388575 MODEL 8722772 protein-coding Aldh1l2 aldehyde dehydrogenase 1 family member L2 ENCODES a protein that exhibits formyltetrahydrofolate dehydrogenase activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); fatty acid beta-oxidation (ortholog); folic acid metabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955405 39387949 39437282 - 102015919 AGCD01005499;AGCD01005500;GBDI01245189;XM_005374604 XP_005374661 MODEL 8807940 protein-coding Thrap3 thyroid hormone receptor associated protein 3 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian rhythm (ortholog); mRNA stabilization (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); FOUND IN exon-exon junction complex (ortholog); mediator complex (ortholog); nuclear speck (ortholog) NW_004955452 14233155 14282521 + 102003201 AGCD01044459;AGCD01044460;AGCD01044461;AGCD01044462;GBDF01049619;XM_005395182;XM_005395183;XM_005395184 XP_005395239;XP_005395240;XP_005395241 MODEL 8722860 protein-coding Atp5mj ATP synthase membrane subunit j FOUND IN mitochondrion (ortholog) NW_004955538 2654283 2658610 - 102018979 AGCD01071134;AGCD01071135;GBCQ01008230;XM_005410814;XM_005410815;XM_005410816 XP_005410871;XP_005410872;XP_005410873 MODEL 8861736 protein-coding LOC102019591 olfactory receptor 52K1-like NW_004955414 19909126 19910145 - 102019591 AGCD01015341;XM_005380459 XP_005380516 MODEL 8952289 protein-coding Adad2 adenosine deaminase domain containing 2 INVOLVED IN spermatid development (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955564 113943 120083 - 102018781 AGCD01074187;GBDF01007545;XM_005413219;XM_013509204 XP_005413276;XP_013364658 MODEL 8943640 protein-coding Asb7 ankyrin repeat and SOCS box containing 7 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromosome organization (ortholog); cortical actin cytoskeleton organization (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); heterochromatin (ortholog) NW_004955416 27610011 27649186 + 102007337 AGCD01017618;GBDF01192819;XM_005381638 XP_005381695 MODEL 8916684 protein-coding Plch1 phospholipase C eta 1 ENCODES a protein that exhibits lysophospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol-mediated signaling (ortholog); ASSOCIATED WITH Holoprosencephaly 14 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955448 6588885 6815087 - 102015257 AGCD01041393;GBDJ01114723;XM_005393067;XM_013518675;XM_013518676;XM_013518677 XP_005393124;XP_013374129;XP_013374130;XP_013374131 MODEL 8883209 pseudo LOC102018010 olfactory receptor 8K3-like NW_004955511 1331160 1331970 + 102018010 AGCD01066365 MODEL 8906261 protein-coding Gp1bb glycoprotein Ib platelet subunit beta ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Bernard-Soulier syndrome (ortholog); carotid artery thrombosis (ortholog); congenital heart disease (ortholog) NW_004955442 18359664 18360979 - 102005849 AGCD01038004;GBCC01043861;XM_005391771;XM_005391772 XP_005391828;XP_005391829 MODEL 8810677 protein-coding Kif13a kinesin family member 13A ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); Golgi to plasma membrane protein transport (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN centrosome (ortholog); endosome membrane (ortholog); midbody (ortholog) NW_004955483 8191514 8366645 + 102019504 AGCD01057831;AGCD01057832;AGCD01057833;GBCQ01102016;XM_005403395;XM_013503818;XM_013503819 XP_005403452;XP_013359272;XP_013359273 MODEL 10218804 protein-coding LOC106150072 uncharacterized LOC106150072 NW_004955463 14164310 14216186 + 106150072 AGCD01049902;AGCD01049903;AGCD01049904;AGCD01049905;GBDK01372738;XM_013521568 XP_013377022 MODEL 39131680 rrna 5S_rRNA 5S ribosomal RNA 8924825 trna trnY(gta) tRNA-Tyr MT 5259 5325 - 15822224 8906359 protein-coding Bacc1 BPTF associated chromatin complex component 1 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN MLL1 complex (ortholog); NURF complex (ortholog) NW_004955467 9911925 9914811 - 102008931 AGCD01051535;GBDJ01083783;XM_013522103;XM_013522104;XM_013522105;XM_013522106;XM_013522107;XM_013522108;XM_013522109 XP_013377557;XP_013377558;XP_013377559;XP_013377560;XP_013377561;XP_013377562;XP_013377563 MODEL 8896711 pseudo LOC102021392 ADP-ribosylation factor-like protein 6-interacting protein 6 pseudogene NW_004955543 1498723 1499331 - 102021392 AGCD01071623 MODEL 10376168 ncrna LOC106147092 uncharacterized LOC106147092 NW_004955518 4747515 4749907 + 106147092 AGCD01067837;GBDJ01211909;XR_001231832 MODEL 39132517 snrna U6 U6 spliceosomal RNA 9066218 pseudo LOC102010772 protein FRG1 pseudogene NW_004955407 27229926 27230701 - 102010772 AGCD01007548 MODEL 8762838 protein-coding Casc3 CASC3 exon junction complex subunit ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN intracellular mRNA localization (ortholog); mRNA splicing, via spliceosome (ortholog); regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); FOUND IN cytoplasm (ortholog); exon-exon junction complex (ortholog); nuclear membrane (ortholog) NW_004955451 14784915 14804191 + 102010761 AGCD01043573;XM_005394350;XM_005394351 XP_005394407;XP_005394408 MODEL 9029130 protein-coding Dnai3 dynein axonemal intermediate chain 3 ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); INVOLVED IN negative regulation of Arp2/3 complex-mediated actin nucleation (ortholog); negative regulation of cell migration (ortholog); positive regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH Encephalocele (ortholog); FOUND IN axonemal dynein complex (ortholog); cytoplasm (ortholog) NW_004955423 8870877 8928070 - 102025701 AGCD01023645;GBBH01089896;XM_005385141 XP_005385198 MODEL 9016598 protein-coding Apip APAF1 interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); methylthioribulose 1-phosphate dehydratase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN L-methionine salvage from methylthioadenosine (ortholog); negative regulation of apoptotic process (ortholog); protein homotetramerization (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 11405721 11426700 + 102013838 AGCD01022755;GBCQ01094751;XM_005384139 XP_005384196 MODEL 9002970 protein-coding Pde8a phosphodiesterase 8A ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); kinase binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway NW_004955416 14063117 14204297 - 102009174 AGCD01017242;AGCD01017243;AGCD01017244;AGCD01017245;AGCD01017246;AGCD01017247;GBDF01307363;XM_005381485;XM_013512564 XP_005381542;XP_013368018 MODEL 8702256 pseudo LOC102006994 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955412 10686073 10686348 + 102006994 AGCD01012776 MODEL 8707681 protein-coding Hdgfl3 HDGF like 3 ENCODES a protein that exhibits microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN microtubule polymerization (ortholog); negative regulation of microtubule depolymerization (ortholog); neuron projection development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955416 13501132 13561095 + 102003763 AGCD01017225;AGCD01017226;GBDF01050153;XM_005381466;XM_013512568 XP_005381523;XP_013368022 MODEL 9050400 protein-coding Cgas cyclic GMP-AMP synthase ENCODES a protein that exhibits 2',3'-cyclic GMP-AMP synthase activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cGAS/STING signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955493 8593104 8607297 - 102009194 AGCD01061315;GBBH01048234;GBCE01080276;XM_005405328 XP_005405385 MODEL 39131544 protein-coding FAM229A family with sequence similarity 229 member A 8887507 protein-coding LOC102024107 taste receptor type 2 member 140-like NW_004955413 8099439 8100275 - 102024107 AGCD01013846;XM_005379629 XP_005379686 MODEL 8961505 protein-coding LOC102019906 olfactory receptor 52B4-like NW_004955414 19994648 19995592 + 102019906 AGCD01015350;XM_005380460 XP_005380517 MODEL 8797223 protein-coding Trim71 tripartite motif containing 71 ENCODES a protein that exhibits miRNA binding (ortholog); translation repressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Congenital Communicating Hydrocephalus 1 (ortholog); COVID-19 (ortholog); CRYPTOZOOSPERMIA (ortholog); FOUND IN P-body (ortholog) NW_004955421 97130 174326 + 102026436 AGCD01021547;AGCD01021548;AGCD01021549;AGCD01021550;GBDF01285530;XM_013513644 XP_013369098 MODEL 9059308 pseudo LOC102012379 60S ribosomal protein L6-like NW_004955573 953680 960330 - 102012379 AGCD01075010 MODEL 9042324 protein-coding Tp53inp1 tumor protein p53 inducible nuclear protein 1 ENCODES a protein that exhibits antioxidant activity (ortholog); INVOLVED IN autophagic cell death (ortholog); cellular response to ethanol (ortholog); cellular response to hydroperoxide (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955417 11063217 11079389 - 102030306 AGCD01018119;GBBH01088065;GBDI01139432;XM_005381823 XP_005381880 MODEL 8963821 protein-coding Adrm1 ADRM1 26S proteasome ubiquitin receptor ENCODES a protein that exhibits endopeptidase activator activity (ortholog); molecular function inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN adipose tissue development (ortholog); follicle-stimulating hormone signaling pathway (ortholog); oogenesis (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome complex (ortholog) NW_004955528 1753450 1759886 - 102029897 AGCD01069569;GBDF01001670;XM_005410026 XP_005410083 MODEL 8971068 protein-coding Ptcd3 pentatricopeptide repeat domain 3 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 51 (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955424 1480934 1507621 - 102020581 AGCD01024237;GBDI01127765;XM_005385406;XM_013514671;XM_013514672 XP_005385463;XP_013370125;XP_013370126 MODEL 8853352 protein-coding Hmgn3 high mobility group nucleosomal binding domain 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN obsolete positive regulation of DNA-binding transcription factor activity (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955502 7037126 7064333 - 102006595 AGCD01064428;AGCD01064429;GBCE01033304;XM_005406907;XM_005406908;XM_005406909;XM_005406911;XM_013505836;XM_013505837;XM_013505838 XP_005406964;XP_005406965;XP_005406966;XP_005406968;XP_013361290;XP_013361291;XP_013361292 MODEL 8769238 protein-coding Bicdl1 BICD family like cargo adaptor 1 ENCODES a protein that exhibits dynactin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi to secretory granule transport (ortholog); neuron projection development (ortholog); FOUND IN centrosome (ortholog) NW_004955455 11503828 11606583 - 102020086 AGCD01046008;GBCQ01004436;GBDJ01422826;XM_005396589 XP_005396646 MODEL 8973290 pseudo LOC102017246 protein slowmo homolog 2-like NW_004955492 8620255 8620892 - 102017246 AGCD01060822 MODEL 8934202 protein-coding Wdr11 WD repeat domain 11 INVOLVED IN cilium assembly (ortholog); head development (ortholog); heart development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Autosomal Recessive Intellectual Developmental Disorder 78 (ortholog); CHARGE syndrome (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955551 1733079 1788354 + 102015571 AGCD01072698;AGCD01072699;GBDF01220834;XM_005412176 XP_005412233 MODEL 9037478 protein-coding Ipo4 importin 4 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); nuclear localization sequence binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); protein localization to nucleus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955409 36214704 36223714 + 102007412 AGCD01010453;GBDI01123457;XM_005377029 XP_005377086 MODEL 8838284 protein-coding LOC102014999 sodium/potassium-transporting ATPase subunit alpha-4 NW_004955468 11932964 11964220 + 102014999 AGCD01052139;AGCD01052140;GBDF01080854;XM_005400196;XM_005400197 XP_005400253;XP_005400254 MODEL 39132984 snrna U1 U1 spliceosomal RNA 8974590 protein-coding LOC102005196 uncharacterized LOC102005196 NW_004955448 10972348 11016806 + 102005196 AGCD01041508;AGCD01041509;AGCD01041510;GBDF01042677;XM_013518600 XP_013374054 MODEL 10146066 protein-coding LOC106147093 proline-rich protein HaeIII subfamily 1-like NW_004955518 150076 161371 - 106147093 AGCD01067719;GBDF01083958;GBDF01083959;XM_013506950 XP_013362404 MODEL 9045802 protein-coding Ret ret proto-oncogene ENCODES a protein that exhibits calcium ion binding (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); embryonic epithelial tube formation (ortholog); ASSOCIATED WITH appendicitis (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); early endosome (ortholog) NW_004955546 1221995 1252147 + 102005303 AGCD01072043;AGCD01072044;GBDF01009147;XM_005411762 XP_005411819 MODEL 8747958 protein-coding LOC102022405 spindle and kinetochore-associated protein 2 NW_004955496 100810 101511 - 102022405 AGCD01062221;XM_013505375 XP_013360829 MODEL 8705484 protein-coding Ttc33 tetratricopeptide repeat domain 33 NW_004955426 25017351 25075164 - 102024820 AGCD01026701;GBCQ01098236;XM_005386241;XM_005386242 XP_005386298;XP_005386299 MODEL 8972148 protein-coding Aldh2 aldehyde dehydrogenase 2 family member ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); carboxylesterase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetaldehyde metabolic process (ortholog); aldehyde catabolic process (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Acute Alcohol Sensitivity (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955482 8352569 8383097 + 102030529 AGCD01057517;GBCE01001171;XM_005403173 XP_005403230 MODEL 8745055 protein-coding Fhl5 four and a half LIM domains 5 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH migraine (ortholog) NW_004955411 22583314 22619281 + 102018370 AGCD01012095;GBDF01008124;XM_005377785;XM_005377787;XM_013510707 XP_005377842;XP_005377844;XP_013366161 MODEL 8897736 ncrna LOC102007002 uncharacterized LOC102007002 NW_004955470 2465067 2474365 - 102007002 AGCD01052678;GBDF01193194;XR_001237015;XR_001237016 MODEL 39133902 misc_rna 7SK 7SK RNA 8766192 protein-coding Atp5mk ATP synthase membrane subunit k ASSOCIATED WITH mitochondrial complex V (ATP synthase) deficiency nuclear type 6 (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955485 7152421 7159211 + 102005938 AGCD01058637;AGCD01058638;GBDJ01025859;XM_005403807;XM_005403808;XM_005403809 XP_005403864;XP_005403865;XP_005403866 MODEL 9008564 pseudo LOC102003467 laccase domain-containing protein 1 pseudogene NW_004955425 25984730 25986065 - 102003467 AGCD01025940 MODEL 39134477 misc_rna 7SK 7SK RNA 39132327 rrna 5S_rRNA 5S ribosomal RNA 39134168 misc_rna 7SK 7SK RNA 8803864 protein-coding Asb8 ankyrin repeat and SOCS box containing 8 NW_004955500 7021895 7051459 - 102026131 AGCD01063897;AGCD01063898;GBBH01218885;XM_005406639;XM_005406641;XM_005406643;XM_013505689;XM_013505690;XM_013505691;XM_013505692;XM_013505693;XM_013505694 XP_005406696;XP_005406698;XP_005406700;XP_013361143;XP_013361144;XP_013361145;XP_013361146;XP_013361147;XP_013361148 MODEL 10393526 ncrna LOC106150073 uncharacterized LOC106150073 NW_004955463 14152785 14159825 + 106150073 AGCD01049902;GBDK01225960;XR_001236655 MODEL 9039698 protein-coding Gp2 glycoprotein 2 ENCODES a protein that exhibits antigen binding (ortholog); INVOLVED IN antigen transcytosis by M cells in mucosal-associated lymphoid tissue (ortholog); ASSOCIATED WITH Body Weight (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); external side of plasma membrane (ortholog) NW_004955442 3963837 3981154 - 102013010 AGCD01037517;GBDI01022076;XM_005391123 XP_005391180 MODEL 8900505 protein-coding Sertm1 serine rich and transmembrane domain containing 1 NW_004955431 9363917 9384620 - 102027666 AGCD01030177;GBBH01024568;XM_005387677;XM_005387678;XM_005387679 XP_005387734;XP_005387735;XP_005387736 MODEL 8762701 protein-coding Ptch1 patched 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cyclin binding (ortholog); hedgehog family protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); anterior segment dysgenesis 5 (ortholog); Axenfeld-Rieger syndrome (ortholog); FOUND IN apical part of cell (ortholog); axonal growth cone (ortholog); caveola (ortholog) NW_004955422 22362330 22418062 - 102005945 AGCD01023158;GBCE01185669;GBDF01209723;XM_013514312 XP_013369766 MODEL 9029606 pseudo LOC102019594 uncharacterized protein KIAA1143 pseudogene NW_004955475 12157531 12158860 + 102019594 AGCD01055183 MODEL 8986462 protein-coding Gdap1 ganglioside induced differentiation associated protein 1 INVOLVED IN cellular response to vitamin D (ortholog); mitochondrial fission (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH autosomal recessive axonal Charcot-Marie-Tooth disease with vocal cord paresis (ortholog); axonal neuropathy (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955444 6053422 6069741 - 102018866 AGCD01038847;AGCD01038848;GBDJ01314137;XM_005392075 XP_005392132 MODEL 8925769 protein-coding Aplf aprataxin and PNKP like factor ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; histone modification pathway; non-homologous end joining pathway of double-strand break repair; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 16338546 16449074 - 102021145 AGCD01024739;AGCD01024740;AGCD01024741;GBDI01026589;XM_005385664;XM_013514727;XM_013514728;XM_013514729;XM_013514730;XM_013514732 XP_005385721;XP_013370181;XP_013370182;XP_013370183;XP_013370184;XP_013370186 MODEL 8989077 protein-coding Hdhd2 haloacid dehalogenase like hydrolase domain containing 2 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH Weight Gain (ortholog) NW_004955402 32495053 32529284 - 102006729 AGCD01000824;GBCB01088536;XM_005372887;XM_013510503;XM_013510504;XM_013510505 XP_005372944;XP_013365957;XP_013365958;XP_013365959 MODEL 8933107 protein-coding LOC102005950 cytochrome P450 2C55 NW_004955507 1146694 1227783 + 102005950 AGCD01065516;AGCD01065517;AGCD01065518;AGCD01065519;AGCD01065520;AGCD01065521;AGCD01065522;AGCD01065523;AGCD01065524;AGCD01065525;AGCD01065526;GBDI01308871;XM_005407534;XM_013506231 XP_005407591;XP_013361685 MODEL 10370157 pseudo LOC106147094 protein kinase C iota type pseudogene NW_004955518 2690856 2692589 + 106147094 AGCD01067783 MODEL 8897308 pseudo LOC102018013 protein AF-9 pseudogene NW_004955432 1643335 1645310 + 102018013 AGCD01030603 MODEL 9003323 protein-coding Tp53inp2 tumor protein p53 inducible nuclear protein 2 INVOLVED IN autophagosome assembly (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955422 26640239 26649291 - 102021252 AGCD01023294;GBDK01146060;XM_005384824;XM_005384825;XM_005384826;XM_013514089 XP_005384881;XP_005384882;XP_005384883;XP_013369543 MODEL 39133903 misc_rna 7SK 7SK RNA 39131681 rrna 5S_rRNA 5S ribosomal RNA 8753097 protein-coding Kif13b kinesin family member 13B ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of axonogenesis (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 51378928 51536509 - 102018458 AGCD01002989;AGCD01002990;AGCD01002991;AGCD01002992;AGCD01002993;GBBH01164816;GBDF01087741;XM_013514371 XP_013369825 MODEL 8738478 protein-coding Hmgn4 high mobility group nucleosomal binding domain 4 NW_004955483 344797 352271 - 102010906 AGCD01057606;GBDJ01086234;XM_005403275;XM_005403276;XM_005403277 XP_005403332;XP_005403333;XP_005403334 MODEL 39132518 snrna U6 U6 spliceosomal RNA 39132328 rrna 5S_rRNA 5S ribosomal RNA 8925147 pseudo LOC102021393 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like NW_004955439 7425526 7524935 - 102021393 AGCD01035768;AGCD01035769;AGCD01035770;AGCD01035771;AGCD01035772 MODEL 39133287 snrna U4 U4 spliceosomal RNA 8906704 protein-coding Tro trophinin INVOLVED IN negative regulation of cell growth (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955475 2266522 2278016 + 102024454 AGCD01054800;GBDK01001381;XM_005401530;XM_013502848;XM_013502849;XM_013502850;XM_013502851;XM_013502852;XM_013502853 XP_005401587;XP_013358302;XP_013358303;XP_013358304;XP_013358305;XP_013358306;XP_013358307 MODEL 39134169 misc_rna 7SK 7SK RNA 8802237 protein-coding Dnai4 dynein axonemal intermediate chain 4 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); hematopoietic progenitor cell differentiation (ortholog); FOUND IN axonemal dynein complex (ortholog); axoneme (ortholog); motile cilium (ortholog) NW_004955423 24027924 24089914 + 102018507 AGCD01024028;AGCD01024029;AGCD01024030;GBBH01032835;GBDI01017375;XM_013514439 XP_013369893 MODEL 8710654 protein-coding LOC102015000 chromatin modification-related protein eaf-1-like NW_004955413 33532336 33534770 + 102015000 AGCD01014676;AGCD01014677;GBDK01189129;XM_013511308 XP_013366762 MODEL 8782150 protein-coding Casd1 CAS1 domain sialic acid O acetyltransferase 1 ENCODES a protein that exhibits N-acetylneuraminate 9-O-acetyltransferase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955432 11236403 11277462 + 102012793 AGCD01030945;GBBH01187265;XM_005388043 XP_005388100 MODEL 8996574 protein-coding Pde8b phosphodiesterase 8B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); INVOLVED IN behavioral fear response (ortholog); negative regulation of insulin secretion (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH basal ganglia disease (ortholog); congenital adrenal hyperplasia (ortholog); Dysarthria (ortholog) NW_004955425 23512865 23614326 - 102017255 AGCD01025846;AGCD01025847;AGCD01025848;GBBH01076490;GBBH01076491;XM_013514855;XM_013514856 XP_013370309;XP_013370310 MODEL 8827330 protein-coding Adam10 ADAM metallopeptidase domain 10 ENCODES a protein that exhibits endopeptidase activity (ortholog); metallodipeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN adherens junction organization (ortholog); amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 18 (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); dendritic spine (ortholog) NW_004955450 15853372 15927966 + 102014962 AGCD01042822;AGCD01042823;AGCD01042824;AGCD01042825;AGCD01042826;GBBH01091689;GBDF01153614;XM_013518929 XP_013374383 MODEL 8905163 protein-coding Ipo5 importin 5 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); NLS-bearing protein import into nucleus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955404 12416755 12480281 - 102018053 AGCD01003461;AGCD01003462;AGCD01003463;GBCB01002187;GBDF01004438;XM_005374083;XM_013516134 XP_005374140;XP_013371588 MODEL 9040056 protein-coding LOC102024108 olfactory receptor 51F1-like NW_004955414 20369929 20370864 - 102024108 AGCD01015371;XM_005380471 XP_005380528 MODEL 39132985 snrna U1 U1 spliceosomal RNA 8744496 ncrna LOC102019914 uncharacterized LOC102019914 NW_004955481 6647496 6652310 + 102019914 AGCD01057032;GBDF01036886;XR_263787 MODEL 8711177 pseudo LOC102012383 zinc finger protein 132-like NW_004955584 1075427 1081804 - 102012383 AGCD01075978;XR_265112;XR_265113 MODEL 8907252 protein-coding Dynlt5 dynein light chain Tctex-type family member 5 NW_004955423 24125928 24148629 - 102019407 AGCD01024031;GBDF01135150;XM_005385289 XP_005385346 MODEL 8930458 protein-coding Trim72 tripartite motif containing 72 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN muscle organ development (ortholog); muscle system process (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); sarcolemma (ortholog) NW_004955493 8074521 8091611 + 102004173 AGCD01061260;AGCD01061261;AGCD01061262;AGCD01061263;GBCB01006024;XM_005405311;XM_005405312 XP_005405368;XP_005405369 MODEL 8913282 protein-coding LOC102007003 ubiquilin-3 NW_004955414 21412848 21415565 - 102007003 AGCD01015418;GBDF01007353;XM_005380091 XP_005380148 MODEL 8964224 ncrna LOC102017253 uncharacterized LOC102017253 NW_004955500 6569965 6573259 - 102017253 AGCD01063886;GBDI01149250;XR_264234 MODEL 9066885 protein-coding Bicdl2 BICD family like cargo adaptor 2 ENCODES a protein that exhibits small GTPase binding (ortholog) NW_004955442 14306144 14314060 + 102006166 AGCD01037810;GBCQ01178276;XM_005391372;XM_005391373 XP_005391429;XP_005391430 MODEL 8738475 protein-coding LOC102010775 olfactory receptor 1468-like NW_004955408 1596483 1597001 + 102010775 AGCD01007966;GBDF01134956;XM_005376562 XP_005376619 MODEL 8704832 protein-coding Bace1 beta-secretase 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); amyloid-beta metabolic process (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955412 18596643 18620089 - 102026730 AGCD01012945;GBDJ01018816;XM_005378205 XP_005378262 MODEL 9041775 protein-coding Thrb thyroid hormone receptor beta ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); cellular response to thyroid hormone stimulus (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); attention deficit hyperactivity disorder (ortholog); breast cancer (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) NW_004955430 15992146 16322696 - 102011571 AGCD01029630;AGCD01029631;AGCD01029632;AGCD01029633;AGCD01029634;GBDI01296864;XM_005387482;XM_013515651 XP_005387539;XP_013371105 MODEL 9021201 protein-coding Fam229b family with sequence similarity 229 member B NW_004955526 4469766 4484934 - 102010089 AGCD01069367;AGCD01069368;GBDI01296473;XM_005409779;XM_005409780;XM_013507360;XM_013507361;XM_013507362;XM_013507363 XP_005409836;XP_005409837;XP_013362814;XP_013362815;XP_013362816;XP_013362817 MODEL 9051545 protein-coding LOC102022408 zinc finger protein 709-like NW_004955499 281448 281870 + 102022408 AGCD01063210;XM_013505552 XP_013361006 MODEL 8717588 ncrna LOC102021394 uncharacterized LOC102021394 NW_004955547 1572431 1574209 - 102021394 AGCD01072233;GBBH01184529;XR_264902 MODEL 8883826 protein-coding LOC102009989 putative uncharacterized protein encoded by LINC00521 NW_004955438 16063238 16071161 + 102009989 AGCD01035395;GBDF01002712;XM_005390358;XM_005390359;XM_005390360;XM_005390361;XM_005390362 XP_005390415;XP_005390416;XP_005390417;XP_005390418;XP_005390419 MODEL 9022544 protein-coding Aldh3a1 aldehyde dehydrogenase 3 family member A1 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); alcohol dehydrogenase (NADP+) activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); positive regulation of cell population proliferation (ortholog); response to cAMP (ortholog); PARTICIPATES IN alkaptonuria pathway; cyclophosphamide pharmacodynamics pathway; cyclophosphamide pharmacokinetics pathway; ASSOCIATED WITH arteriosclerosis (ortholog); autism spectrum disorder (ortholog); cataract (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955467 96140 105738 + 102025778 AGCD01051209;GBBH01172351;XM_005399260;XM_013522026 XP_005399317;XP_013377480 MODEL 9005163 protein-coding Atp5pb ATP synthase peripheral stalk-membrane subunit b ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); substantia nigra development (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955435 14940502 14952423 + 102027334 AGCD01033258;GBDJ01003480;XM_005388950 XP_005389007 MODEL 9061361 protein-coding Fhod1 formin homology 2 domain containing 1 INVOLVED IN establishment of centrosome localization (ortholog); nuclear migration (ortholog); positive regulation of stress fiber assembly (ortholog); FOUND IN cytosol (ortholog); intercalated disc (ortholog); nucleus (ortholog) NW_004955484 9380202 9396400 + 102007435 AGCD01058415;GBDK01073619;XM_005403665;XM_005403666 XP_005403722;XP_005403723 MODEL 8747822 protein-coding Gdap1l1 ganglioside induced differentiation associated protein 1 like 1 FOUND IN mitochondrion (ortholog) NW_004955445 13045864 13097447 - 102021717 AGCD01039767;GBDF01053824;XM_005392484;XR_262333;XR_262334;XR_262336;XR_262337 XP_005392541 MODEL 8780663 ncrna LOC102005951 uncharacterized LOC102005951 NW_004955429 3029946 3056828 + 102005951 AGCD01028449;AGCD01028450;AGCD01028451;AGCD01028452;AGCD01028453;AGCD01028454;GBDF01054382;XR_261312 MODEL 9051062 protein-coding Adsl adenylosuccinate lyase ENCODES a protein that exhibits (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (ortholog); identical protein binding (ortholog); N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955413 26067463 26084669 + 102007645 AGCD01014422;GBCB01011117;XM_005379310;XM_005379312;XM_013511421 XP_005379367;XP_005379369;XP_013366875 MODEL 10116908 protein-coding LOC106147095 uncharacterized LOC106147095 NW_004955518 5049477 5051023 - 106147095 AGCD01067851;XM_013506954 XP_013362408 MODEL 8712147 pseudo LOC102018014 endothelial differentiation-related factor 1 pseudogene NW_004955518 3788942 3789430 - 102018014 AGCD01067809 MODEL 39134478 misc_rna 7SK 7SK RNA 8773557 protein-coding Tp53rk TP53 regulating kinase ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 4 (ortholog); FOUND IN cytoplasm (ortholog); EKC/KEOPS complex (ortholog); nucleus (ortholog) NW_004955445 10734723 10737445 + 102016858 AGCD01039678;GBDI01218514;XM_005392371 XP_005392428 MODEL 9052207 protein-coding Hmgn5 high mobility group nucleosome binding domain 5 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN chromatin organization (ortholog); glutathione metabolic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); high grade glioma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955529 1118706 1125596 - 102018970 AGCD01069674;GBDJ01020931;GBDK01082669;XM_005410073;XM_013507540 XP_005410130;XP_013362994 MODEL 8841203 protein-coding Gp5 glycoprotein V platelet ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; FOUND IN cell surface (ortholog) NW_004955420 14377800 14382003 + 102029972 AGCD01020943;GBDF01054698;XM_005383194 XP_005383251 MODEL 8863502 protein-coding Cggbp1 CGG triplet repeat binding protein 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 5434954 5443713 + 102023002 AGCD01006914;AGCD01006915;GBBH01152254;XM_005375528;XM_005375529;XM_013503658 XP_005375585;XP_005375586;XP_013359112 MODEL 8882684 protein-coding LOC102005199 small integral membrane protein 15-like NW_004955588 770792 771016 + 102005199 AGCD01076122;XM_005414524 XP_005414581 MODEL 39132336 snrna U6 U6 spliceosomal RNA 39133289 snrna U4 U4 spliceosomal RNA 8881983 protein-coding Fhod3 formin homology 2 domain containing 3 INVOLVED IN actin filament network formation (ortholog); cardiac myofibril assembly (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); genetic disease (ortholog); FOUND IN sarcomere (ortholog); striated muscle thin filament (ortholog) NW_004955402 22822060 23277993 + 102011489 AGCD01000613;AGCD01000614;AGCD01000615;AGCD01000616;AGCD01000617;AGCD01000618;AGCD01000619;AGCD01000620;AGCD01000621;GBCQ01095975;XM_005372817;XM_005372818;XM_005372820;XM_005372821;XM_005372822;XM_005372823;XM_005372824;XM_013510258;XM_013510260 XP_005372874;XP_005372875;XP_005372877;XP_005372878;XP_005372879;XP_005372880;XP_005372881;XP_013365712;XP_013365714 MODEL 8884434 protein-coding Retn resistin INVOLVED IN fat cell differentiation (ortholog); negative regulation of feeding behavior (ortholog); positive regulation of collagen metabolic process (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Albuminuria (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955563 1607814 1609273 - 102028141 AGCD01074153;GBDK01016678;XM_005413172 XP_005413229 MODEL 8760404 protein-coding Kif14 kinesin family member 14 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); microtubule binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cell division (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); microtubule (ortholog); midbody (ortholog) NW_004955406 36732135 36791756 - 102004891 AGCD01006564;AGCD01006565;GBDI01362265;XM_013522030;XM_013522031;XM_013522033;XM_013522036;XM_013522039;XM_013522042;XR_001236838 XP_013377484;XP_013377485;XP_013377487;XP_013377490;XP_013377493;XP_013377496 MODEL 8782728 protein-coding Plch2 phospholipase C eta 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol metabolic process (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955486 8717799 8785144 - 102007236 AGCD01059155;AGCD01059156;GBBH01188538;XM_013504169;XM_013504170;XM_013504172;XM_013504173;XM_013504174 XP_013359623;XP_013359624;XP_013359626;XP_013359627;XP_013359628 MODEL 8724032 protein-coding Apln apelin ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); drinking behavior (ortholog); PARTICIPATES IN apelin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Cardiomegaly (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955473 5346822 5356359 + 102013713 AGCD01053974;GBDK01240998;XM_005401260;XM_005401261 XP_005401317;XP_005401318 MODEL 8788377 protein-coding Pde9a phosphodiesterase 9A ENCODES a protein that exhibits 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cGMP catabolic process (ortholog); cGMP metabolic process (ortholog); negative regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Death (ortholog); FOUND IN cytosol (ortholog); perikaryon (ortholog); plasma membrane (ortholog) NW_004955407 39090718 39165363 - 102009255 AGCD01007821;AGCD01007822;GBBH01118078;XM_005375809;XM_005375810;XM_013505072;XM_013505077 XP_005375866;XP_005375867;XP_013360526;XP_013360531 MODEL 8865511 pseudo LOC102003469 integrator complex subunit 10-like NW_004955426 26056064 26062306 + 102003469 AGCD01026736;AGCD01026737 MODEL 9026698 protein-coding Ipo7 importin 7 ENCODES a protein that exhibits histone binding (ortholog); SMAD binding (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of odontoblast differentiation (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955414 25131703 25195892 + 102028737 AGCD01015576;AGCD01015577;AGCD01015578;AGCD01015579;AGCD01015580;AGCD01015581;GBCE01098244;XM_005380260;XM_013511836 XP_005380317;XP_013367290 MODEL 8722343 protein-coding Wdr12 WD repeat domain 12 INVOLVED IN maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); dilated cardiomyopathy (ortholog); myocardial infarction (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955457 11947816 11970066 + 102030389 AGCD01046996;AGCD01046997;GBDF01016523;XM_005397046;XM_005397047 XP_005397103;XP_005397104 MODEL 39131682 rrna 5S_rRNA 5S ribosomal RNA 10147467 ncrna LOC106150074 uncharacterized LOC106150074 NW_004955464 3852835 3877145 + 106150074 AGCD01049979;XR_001236667 MODEL 8851640 ncrna LOC102012385 uncharacterized LOC102012385 NW_004955592 538916 543806 - 102012385 AGCD01076317;GBDI01163562;XR_265140 MODEL 39132331 rrna 5S_rRNA 5S ribosomal RNA 8870338 pseudo LOC102010777 cyclin-dependent kinase 4 pseudogene NW_004955458 15031076 15032155 + 102010777 AGCD01047860 MODEL 9018113 protein-coding Trim8 tripartite motif containing 8 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH electroclinical syndrome (ortholog); epilepsy (ortholog); Focal Segmental Glomerulosclerosis and Neurodevelopmental Syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955485 7784625 7798131 - 102013832 AGCD01058676;AGCD01058677;AGCD01058678;GBBH01035373;GBDK01003830;XM_005403830 XP_005403887 MODEL 8723911 protein-coding Ttc34 tetratricopeptide repeat domain 34 NW_004955486 8620609 8633069 + 102003451 AGCD01059152;AGCD01059153;GBDJ01134032;XM_005404156 XP_005404213 MODEL 8816785 ncrna LOC102019600 uncharacterized LOC102019600 NW_004955484 5180341 5313392 - 102019600 AGCD01058248;AGCD01058249;AGCD01058250;AGCD01058251;AGCD01058252;GBDF01193757;XR_263887;XR_263888 MODEL 8756291 protein-coding LOC102015003 putative olfactory receptor 52P1 NW_004955414 20101528 20102481 - 102015003 AGCD01015357;XM_005380047 XP_005380104 MODEL 8998297 protein-coding Hdhd3 haloacid dehalogenase like hydrolase domain containing 3 FOUND IN mitochondrion (ortholog); nucleolus (ortholog) NW_004955419 14118729 14123578 + 102022819 AGCD01020012;GBBH01094483;XM_005382676;XM_005382677;XM_013513136 XP_005382733;XP_005382734;XP_013368590 MODEL 39132338 snrna U6 U6 spliceosomal RNA 39132988 snrna U1 U1 spliceosomal RNA 8833811 protein-coding Gp9 glycoprotein IX platelet INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Bernard-Soulier syndrome (ortholog); Bernard-Soulier Syndrome, Type C (ortholog); genetic disease (ortholog) NW_004955450 10478165 10479425 - 102012594 AGCD01042622;GBBH01149548;XM_005393739 XP_005393796 MODEL 8965578 protein-coding LOC102022409 uncharacterized LOC102022409 NW_004955500 6832058 6838822 - 102022409 AGCD01063892;GBCQ01062310;XM_005406626;XM_013505701;XR_001231495;XR_001231496;XR_001231497;XR_001231498;XR_264239;XR_264241 XP_005406683;XP_013361155 MODEL 8753086 protein-coding Fibcd1 fibrinogen C domain containing 1 ENCODES a protein that exhibits chitin binding (ortholog); FOUND IN membrane (ortholog) NW_004955513 810927 835106 - 102018210 AGCD01066832;XM_005408350;XM_013506563 XP_005408407;XP_013362017 MODEL 9015535 protein-coding Fam234a family with sequence similarity 234 member A ASSOCIATED WITH basal cell carcinoma (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cell surface (ortholog) NW_004955442 16915630 16950809 - 102005425 AGCD01037923;AGCD01037924;AGCD01037925;GBCQ01010346;XM_005391667;XM_005391668 XP_005391724;XP_005391725 MODEL 8708100 protein-coding Aldh3a2 aldehyde dehydrogenase 3 family member A2 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); long-chain fatty aldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); central nervous system development (ortholog); epidermis development (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Sjogren-Larsson syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955467 141592 162376 - 102024986 AGCD01051211;GBCB01005261;XM_005399257;XM_005399258 XP_005399314;XP_005399315 MODEL 8873012 ncrna LOC102018016 uncharacterized LOC102018016 NW_004955433 19172341 19176616 + 102018016 AGCD01031860;XR_261599 MODEL 39134170 misc_rna 7SK 7SK RNA 39131567 protein-coding SERTM2 serine rich and transmembrane domain containing 2 9034505 protein-coding Gdap2 ganglioside induced differentiation associated protein 2 INVOLVED IN response to retinoic acid (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 27 (ortholog) NW_004955435 20980551 21037964 - 102010303 AGCD01033468;GBCE01057032;XM_005389060;XM_005389062;XM_005389063;XM_013516489 XP_005389117;XP_005389119;XP_005389120;XP_013371943 MODEL 8804296 protein-coding Troap trophinin associated protein ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog) NW_004955500 8129031 8137235 + 102016493 AGCD01063981;GBDF01084874;XM_005406696;XM_005406697;XM_005406698;XM_005406699 XP_005406753;XP_005406754;XP_005406755;XP_005406756 MODEL 8837252 protein-coding Dnai7 dynein axonemal intermediate chain 7 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); ASSOCIATED WITH lung cancer (ortholog); Lung Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN axonemal dynein complex (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955413 20227807 20287211 - 102028947 AGCD01014212;GBDI01218967;XM_005379097;XM_013511446;XM_013511447;XM_013511448 XP_005379154;XP_013366900;XP_013366901;XP_013366902 MODEL 8783943 protein-coding LOC102024110 nucleolin-like NW_004955475 4819884 4825301 + 102024110 AGCD01054894;XM_005401704 XP_005401761 MODEL 8839648 protein-coding Thrsp thyroid hormone responsive ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN regulation of lipid biosynthetic process (ortholog); regulation of triglyceride biosynthetic process (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); attention deficit hyperactivity disorder (ortholog); carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955414 13879095 13883378 - 102006448 AGCD01015123;GBDI01010753;XM_005379823 XP_005379880 MODEL 8964609 pseudo LOC102005201 phosphatase and actin regulator 4 pseudogene NW_004955591 755440 812129 - 102005201 AGCD01076284;AGCD01076285;AGCD01076286 MODEL 8725768 ncrna LOC102021396 uncharacterized LOC102021396 NW_004955550 1116020 1133375 + 102021396 AGCD01072549;AGCD01072550;GBDF01084147;XR_001232258 MODEL 9004574 pseudo LOC102009990 retinol dehydrogenase 11 pseudogene NW_004955438 7901724 7902409 - 102009990 AGCD01035148 MODEL 8944585 protein-coding Retreg1 reticulophagy regulator 1 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN autophagy (ortholog); collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); hereditary sensory and autonomic neuropathy type 2 (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955426 5574207 5688236 - 102012106 AGCD01026130;AGCD01026131;AGCD01026132;AGCD01026133;AGCD01026134;AGCD01026135;AGCD01026136;AGCD01026137;AGCD01026138;GBCB01023016;XM_005386135;XM_005386136 XP_005386192;XP_005386193 MODEL 39133904 misc_rna 7SK 7SK RNA 8946358 pseudo LOC102007005 etoposide-induced protein 2.4 homolog pseudogene NW_004955414 3807141 3816292 + 102007005 AGCD01014841 MODEL 8847913 protein-coding Atp5pd ATP synthase peripheral stalk subunit d ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to peptide (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); congenital hypothyroidism (ortholog); depressive disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) NW_004955553 1893767 1897175 - 102018863 AGCD01072903;GBBH01000775;XM_005412268 XP_005412325 MODEL 8974162 pseudo LOC102017256 DCC-interacting protein 13-alpha pseudogene NW_004955425 5308856 5312153 - 102017256 AGCD01025339;AGCD01025340 MODEL 8918371 protein-coding Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ENCODES a protein that exhibits actin binding (ortholog); cyclin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); cardiac muscle hypertrophy (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); Cardiomegaly (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955407 36456628 36588940 + 102015174 AGCD01007769;AGCD01007770;AGCD01007771;GBDF01046753;GBDK01234122;XM_005375747;XM_005375749;XM_005375750;XM_005375751;XM_013504724 XP_005375804;XP_005375806;XP_005375807;XP_005375808;XP_013360178 MODEL 8939476 protein-coding Plcl1 phospholipase C like 1 (inactive) ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); regulation of synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH Experimental Liver Neoplasms (ortholog) NW_004955403 2643092 2904651 - 102011717 AGCD01001738;AGCD01001739;AGCD01001740;GBDI01356679;XM_005373259;XM_013511993;XM_013511996;XM_013512003;XM_013512012;XM_013512015;XM_013512018;XM_013512022 XP_005373316;XP_013367447;XP_013367450;XP_013367457;XP_013367466;XP_013367469;XP_013367472;XP_013367476 MODEL 8731544 protein-coding Aplnr apelin receptor ENCODES a protein that exhibits apelin receptor activity (ortholog); G protein-coupled peptide receptor activity (ortholog); mechanoreceptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult heart development (ortholog); aorta development (ortholog); PARTICIPATES IN apelin signaling pathway; ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955511 2321445 2324417 - 102014698 AGCD01066398;GBDI01358063;XM_005407987 XP_005408044 MODEL 39134479 misc_rna 7SK 7SK RNA 8728506 protein-coding Bicra BRD4 interacting chromatin remodeling complex associated protein ENCODES a protein that exhibits transcription regulator activator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Coffin-Siris syndrome 1 (ortholog); Coffin-Siris syndrome 12 (ortholog); Developmental Disease (ortholog); FOUND IN nucleus (ortholog); SWI/SNF complex (ortholog) NW_004955574 1463656 1484709 + 102018239 AGCD01075180;AGCD01075181;GBCB01112015;GBCE01142278;XM_013509545 XP_013364999 MODEL 8784937 pseudo LOC102003470 L-lactate dehydrogenase A chain pseudogene NW_004955505 1011597 1012538 + 102003470 AGCD01064964 MODEL 9063378 protein-coding Bace2 beta-secretase 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN astrocyte activation (ortholog); glucose homeostasis (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); frontotemporal dementia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN dense core granule (ortholog); Golgi apparatus (ortholog); melanosome membrane (ortholog) NW_004955407 40792089 40879872 + 102022467 AGCD01007850;AGCD01007851;AGCD01007852;GBBH01042998;GBCE01054363;XM_013505275 XP_013360729 MODEL 8819473 protein-coding Ptch2 patched 2 ENCODES a protein that exhibits hedgehog family protein binding (ortholog); smoothened binding (ortholog); INVOLVED IN cell fate determination (ortholog); epidermal cell fate specification (ortholog); epidermis development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955464 13387844 13403991 + 102009156 AGCD01050274;AGCD01050275;GBDJ01143446;XM_005398741;XM_013521618;XM_013521619;XM_013521620;XM_013521621;XM_013521622;XM_013521623;XM_013521624;XM_013521625 XP_005398798;XP_013377072;XP_013377073;XP_013377074;XP_013377075;XP_013377076;XP_013377077;XP_013377078;XP_013377079 MODEL 8769406 protein-coding Hmgxb3 HMG-box containing 3 NW_004955415 4462653 4509622 - 102025999 AGCD01015970;AGCD01015971;GBBH01076485;GBDI01258186;XM_013512212;XM_013512213;XM_013512214 XP_013367666;XP_013367667;XP_013367668 MODEL 8759402 protein-coding Cask calcium/calmodulin dependent serine protein kinase ENCODES a protein that exhibits neurexin family protein binding (ortholog); PDZ domain binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN calcium ion import (ortholog); cerebral cortex development (ortholog); negative regulation of cell-matrix adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Acholinesterasemia (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN apical dendrite (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955565 879560 1242727 + 102027583 AGCD01074298;AGCD01074299;AGCD01074300;AGCD01074301;AGCD01074302;AGCD01074303;AGCD01074304;AGCD01074305;AGCD01074306;GBBH01193515;XM_005413251 XP_005413308 MODEL 8978684 protein-coding Adam11 ADAM metallopeptidase domain 11 INVOLVED IN behavioral response to acetic acid induced pain (ortholog); behavioral response to formalin induced pain (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 17608732 17614469 + 102016442 AGCD01043763;GBCB01131517;GBCE01084702;XM_013519435 XP_013374889 MODEL 8795535 pseudo LOC102010778 60S ribosomal protein L12-like NW_004955459 3652052 3652565 + 102010778 AGCD01048015 MODEL 39131527 protein-coding TTC36 tetratricopeptide repeat domain 36 39133292 snrna U4 U4 spliceosomal RNA 9006538 protein-coding Cgn cingulin ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); epithelial cell morphogenesis (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); nonsyndromic deafness (ortholog); FOUND IN apical junction complex (ortholog); bicellular tight junction (ortholog); brush border (ortholog) NW_004955589 855715 881123 - 102020623 AGCD01076183;GBCQ01070264;XM_005414571;XM_013509956;XM_013509957;XM_013509958 XP_005414628;XP_013365410;XP_013365411;XP_013365412 MODEL 9046128 protein-coding Sesn1 sestrin 1 ENCODES a protein that exhibits L-leucine binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); GATOR2 complex (ortholog) NW_004955411 34033986 34051171 - 102015489 AGCD01012378;AGCD01012379;GBCB01023930;GBDF01121431;XM_013510807 XP_013366261 MODEL 8765535 protein-coding Kif15 kinesin family member 15 ASSOCIATED WITH Braddock-Carey Syndrome 2 (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog) NW_004955420 26774506 26828301 - 102008630 AGCD01021431;AGCD01021432;AGCD01021433;GBBH01213614;XM_005383474;XM_013513372;XM_013513373;XM_013513374;XM_013513375 XP_005383531;XP_013368826;XP_013368827;XP_013368828;XP_013368829 MODEL 9007676 ncrna LOC102005952 uncharacterized LOC102005952 NW_004955429 17092345 17096969 - 102005952 AGCD01028845;GBCQ01165026;XR_001234501;XR_001234502;XR_001234503;XR_261348 MODEL 39132339 snrna U6 U6 spliceosomal RNA 9032786 protein-coding Hdhd5 haloacid dehalogenase like hydrolase domain containing 5 FOUND IN mitochondrion (ortholog) NW_004955454 5284936 5294969 - 102029474 AGCD01045139;AGCD01045140;GBBH01164117;GBDJ01224094;XM_013520236;XM_013520237 XP_013375690;XP_013375691 MODEL 39131683 rrna 5S_rRNA 5S ribosomal RNA 9042078 protein-coding Retreg2 reticulophagy regulator family member 2 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); reticulophagy (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955453 14258523 14263573 - 102021839 AGCD01044860;GBCQ01006315;XM_005395587 XP_005395644 MODEL 8927401 protein-coding Ipo8 importin 8 ASSOCIATED WITH genetic disease (ortholog); VISS syndrome (ortholog) NW_004955505 4490738 4574969 + 102013193 AGCD01065114;AGCD01065115;AGCD01065116;GBDF01126107;XM_005407134 XP_005407191 MODEL 8728107 protein-coding Tp53tg5 TP53 target 5 FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955445 11958649 11962623 + 102007163 AGCD01039730;GBDF01044016;XM_005392432;XM_005392433 XP_005392489;XP_005392490 MODEL 8701326 protein-coding LOC102018017 olfactory receptor 2J3-like NW_004955524 45694 46627 + 102018017 AGCD01068663;XM_013507226 XP_013362680 MODEL 8785958 protein-coding Wdr13 WD repeat domain 13 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); INVOLVED IN negative regulation of type B pancreatic cell proliferation (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955543 182279 190435 + 102022017 AGCD01071563;GBDJ01277750;XM_005411270;XM_005411271 XP_005411327;XP_005411328 MODEL 39132335 rrna 5S_rRNA 5S ribosomal RNA 8974311 protein-coding LOC102019919 acylcarnitine hydrolase-like NW_004955484 9640245 9648664 - 102019919 AGCD01058424;GBCQ01093038;XM_013504018 XP_013359472 MODEL 8881358 protein-coding Trim9 tripartite motif containing 9 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); SNARE binding (ortholog); INVOLVED IN negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of dense core granule exocytosis (ortholog); negative regulation of SNARE complex assembly (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendrite (ortholog) NW_004955409 11837717 11946718 + 102015811 AGCD01009529;AGCD01009530;GBDF01209690;XM_005376796;XM_005376797;XM_005376798;XM_005376799;XM_005376802;XM_013510331 XP_005376853;XP_005376854;XP_005376855;XP_005376856;XP_005376859;XP_013365785 MODEL 8915033 protein-coding Asb9 ankyrin repeat and SOCS box containing 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) NW_004955519 2902802 2941358 + 102018964 AGCD01067945;AGCD01067946;GBDF01281643;XM_005409176;XM_005409177;XM_013506982 XP_005409233;XP_005409234;XP_013362436 MODEL 10361903 ncrna LOC106147096 uncharacterized LOC106147096 NW_004955518 3348143 3360986 + 106147096 AGCD01067799;AGCD01067800;GBDF01074799;XR_001231834;XR_001231835;XR_001231836 MODEL 8995980 pseudo LOC102019601 N-alpha-acetyltransferase 50 pseudogene NW_004955419 564842 565381 + 102019601 AGCD01019595 MODEL 8886272 ncrna LOC102005202 uncharacterized LOC102005202 NW_004955599 391655 395193 + 102005202 AGCD01076643;AGCD01076644;GBCB01040783;XR_001232557;XR_001232558 MODEL 39132990 snrna U1 U1 spliceosomal RNA 9026785 protein-coding Pdf peptide deformylase, mitochondrial ENCODES a protein that exhibits peptide deformylase activity (ortholog); INVOLVED IN peptidyl-methionine modification (ortholog); positive regulation of cell population proliferation (ortholog); post-translational protein modification (ortholog); FOUND IN mitochondrion (ortholog) NW_004955484 7363861 7366159 + 102005147 AGCD01058329;GBCQ01174818;GBDF01249467;XM_013503933 XP_013359387 MODEL 9065411 protein-coding Gpa33 glycoprotein A33 ASSOCIATED WITH Latent Tuberculosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955462 9840188 9869938 + 102026614 AGCD01049344;AGCD01049345;GBDI01324632;XM_005398235 XP_005398292 MODEL 8791415 protein-coding LOC102022412 prostaglandin-E(2) 9-reductase-like NW_004955429 524674 542300 - 102022412 AGCD01028365;GBCQ01005033;XM_005386853;XM_013515393 XP_005386910;XP_013370847 MODEL 9056715 protein-coding Fam234b family with sequence similarity 234 member B NW_004955413 9899940 9932050 + 102021957 AGCD01013917;AGCD01013918;GBCE01023713;XM_005378980 XP_005379037 MODEL 8837437 pseudo LOC102007014 40S ribosomal protein S15a pseudogene NW_004955418 14137072 14137418 + 102007014 AGCD01019064 MODEL 8710019 pseudo LOC102017257 60S acidic ribosomal protein P2 pseudogene NW_004955501 1411347 1416378 - 102017257 AGCD01064052 MODEL 8803705 protein-coding Aplp1 amyloid beta precursor like protein 1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); alpha-2B adrenergic receptor binding (ortholog); alpha-2C adrenergic receptor binding (ortholog); INVOLVED IN cellular response to norepinephrine stimulus (ortholog); cytosolic mRNA polyadenylation (ortholog); extracellular matrix organization (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955468 2694286 2703658 - 102018378 AGCD01051833;GBCQ01114642;GBDF01190756;XM_005400298 XP_005400355 MODEL 8925452 protein-coding Gde1 glycerophosphodiester phosphodiesterase 1 ENCODES a protein that exhibits glycerophosphodiester phosphodiesterase activity (ortholog); glycerophosphoinositol glycerophosphodiesterase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN ethanolamine metabolic process (ortholog); N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955442 3186440 3219092 - 102008150 AGCD01037499;AGCD01037500;GBCQ01062110;XM_005391107 XP_005391164 MODEL 8744934 pseudo LOC102015010 dnaJ homolog subfamily C member 8 pseudogene NW_004955417 13205194 13206962 + 102015010 AGCD01018173 MODEL 9022593 protein-coding Plcl2 phospholipase C like 2 ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN B cell proliferation involved in immune response (ortholog); B-1a B cell differentiation (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH schizophrenia (ortholog) NW_004955430 9157074 9347366 + 102028997 AGCD01029407;AGCD01029408;AGCD01029409;GBCE01152675;GBDJ01186898;XM_005387455 XP_005387512 MODEL 8833442 protein-coding Bach1 BTB domain and CNC homolog 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN DNA repair (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Cardiotoxicity (ortholog); Fibrosis (ortholog); FOUND IN nucleus (ortholog) NW_004955407 28678181 28701115 + 102027488 AGCD01007593;AGCD01007594;GBDF01225784;XM_013504068 XP_013359522 MODEL 8872856 protein-coding Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 ENCODES a protein that exhibits ATPase activator activity (ortholog); C3HC4-type RING finger domain binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); flagellated sperm motility (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH galactosemia (ortholog); mouth disease (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); microtubule cytoskeleton (ortholog) NW_004955472 2604002 2618033 - 102011980 AGCD01053478;AGCD01053479;AGCD01053480;GBDK01003789;XM_005401111 XP_005401168 MODEL 9003348 protein-coding LOC102021397 olfactory receptor 4K15-like NW_004955550 492121 493077 - 102021397 AGCD01072509;XM_005412131 XP_005412188 MODEL 39133294 snrna U4 U4 spliceosomal RNA 8713054 protein-coding Adss1 adenylosuccinate synthase 1 ENCODES a protein that exhibits actin filament binding (ortholog); adenylosuccinate synthase activity (ortholog); GTPase activity (ortholog); INVOLVED IN AMP biosynthetic process (ortholog); AMP salvage (ortholog); cellular response to electrical stimulus (ortholog); PARTICIPATES IN Canavan disease pathway; de novo purine biosynthetic pathway; ASSOCIATED WITH Distal Myopathy 5 (ortholog); Experimental Diabetes Mellitus (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955538 3179299 3196251 + 102026474 AGCD01071153;GBCB01005620;GBDJ01133679;XM_005410839;XM_013507879 XP_005410896;XP_013363333 MODEL 8742967 protein-coding Adam12 ADAM metallopeptidase domain 12 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH osteoarthritis (ortholog); ureteral obstruction (ortholog); FOUND IN plasma membrane (ortholog) NW_004955477 3917637 4263529 - 102011866 AGCD01055577;AGCD01055578;AGCD01055579;AGCD01055580;AGCD01055581;GBCE01119464;GBCQ01016280;XM_005402080 XP_005402137 MODEL 8990249 protein-coding Cgnl1 cingulin like 1 INVOLVED IN actin filament organization (ortholog); angiogenesis (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); apical junction complex (ortholog); bicellular tight junction (ortholog) NW_004955450 16785358 16913718 - 102020624 AGCD01042853;AGCD01042854;GBDJ01137564;XM_005393852;XM_013518875 XP_005393909;XP_013374329 MODEL 9029202 protein-coding Caskin1 CASK interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN regulation of postsynaptic density assembly (ortholog); signal transduction (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955442 15075427 15092786 + 102029127 AGCD01037859;GBBH01155586;GBCE01037233;XM_005391448;XM_005391450;XM_005391451 XP_005391505;XP_005391507;XP_005391508 MODEL 8744929 protein-coding Fibin fin bud initiation factor homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955476 6325492 6327075 + 102014775 AGCD01055328;GBDK01432398;XM_005401745 XP_005401802 MODEL 39133905 misc_rna 7SK 7SK RNA 8866370 pseudo LOC102012388 serine/threonine-protein kinase VRK1-like NW_004955402 55411512 55414352 + 102012388 AGCD01001435 MODEL 39134171 misc_rna 7SK 7SK RNA 39132340 snrna U6 U6 spliceosomal RNA 8789404 protein-coding Atp5pf ATP synthase peripheral stalk subunit F6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN negative regulation of arachidonate secretion (ortholog); negative regulation of prostaglandin secretion (ortholog); positive regulation of blood pressure (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH essential hypertension (ortholog); Experimental Diabetes Mellitus (ortholog); heart disease (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); mitochondrion (ortholog) NW_004955407 25601253 25609933 - 102017843 AGCD01007512;GBDK01357064;XM_005375588;XM_005375589 XP_005375645;XP_005375646 MODEL 39134480 misc_rna 7SK 7SK RNA 8702642 protein-coding Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B ENCODES a protein that exhibits protein kinase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN adipose tissue development (ortholog); myoblast fusion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 3 (ortholog); Diamond-Blackfan anemia (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955578 1187128 1195574 + 102022981 AGCD01075511;GBDF01008859;XM_005414085;XM_005414086;XM_005414087;XM_005414088;XM_005414089;XM_005414090 XP_005414142;XP_005414143;XP_005414144;XP_005414145;XP_005414146;XP_005414147 MODEL 9068228 protein-coding Bicral BICRA like chromatin remodeling complex associated protein ASSOCIATED WITH autism spectrum disorder (ortholog); prostate cancer (ortholog); FOUND IN SWI/SNF complex (ortholog) NW_004955437 8841830 8896391 + 102024273 AGCD01034501;AGCD01034502;AGCD01034503;AGCD01034504;AGCD01034505;AGCD01034506;GBDI01047312;XM_005389724;XM_005389725 XP_005389781;XP_005389782 MODEL 8917084 ncrna LOC102024112 uncharacterized LOC102024112 NW_004955417 16930439 16936030 - 102024112 AGCD01018277;GBDF01075894;XR_260483 MODEL 8779129 protein-coding Hdlbp high density lipoprotein binding protein ASSOCIATED WITH autistic disorder (ortholog); chromosome 2q37 deletion syndrome (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear body (ortholog) NW_004955542 444221 505512 + 102008891 AGCD01071474;GBDF01002916;XM_005411130;XM_005411131;XM_005411132 XP_005411187;XP_005411188;XP_005411189 MODEL 9053819 protein-coding Trpa1 transient receptor potential cation channel subfamily A member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); asthma (ortholog); Bronchial Hyperreactivity (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); plasma membrane (ortholog) NW_004955444 7876284 7922010 + 102027018 AGCD01038922;GBCQ01156908;XM_005392098 XP_005392155 MODEL 8782671 protein-coding Hmgxb4 HMG-box containing 4 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN NURF complex (ortholog) NW_004955405 43058768 43088592 + 102005886 AGCD01005598;AGCD01005599;GBDF01225224;XM_005374654;XM_005374655;XM_005374656;XM_005374657;XM_005374659;XM_005374660;XM_013519213;XR_259462 XP_005374711;XP_005374712;XP_005374713;XP_005374714;XP_005374716;XP_005374717;XP_013374667 MODEL 8713559 protein-coding Ttc36 tetratricopeptide repeat domain 36 INVOLVED IN central nervous system neuron development (ortholog); memory (ortholog); negative regulation of peptidyl-threonine phosphorylation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog) NW_004955412 19670590 19672495 + 102019157 AGCD01012968;GBCQ01033714;XM_013511203 XP_013366657 MODEL 9065673 protein-coding Ptchd1 patched domain containing 1 INVOLVED IN cognition (ortholog); smoothened signaling pathway (ortholog); social behavior (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); plasma membrane (ortholog) NW_004955509 3716086 3767541 + 102013108 AGCD01066032;AGCD01066033;GBCE01090342;XM_005407829 XP_005407886 MODEL 8999491 protein-coding LOC102010781 proline-rich proteoglycan 2-like NW_004955463 13403383 13407571 + 102010781 AGCD01049866;GBDI01274687;XM_005398474 XP_005398531 MODEL 8820373 protein-coding Thsd1 thrombospondin type 1 domain containing 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN focal adhesion assembly (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); Hydrops Fetalis (ortholog); intracranial berry aneurysm 12 (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955431 5472209 5495937 + 102010933 AGCD01030033;GBCE01160079;GBDK01230446;XM_005387630 XP_005387687 MODEL 8762910 protein-coding Triml1 tripartite motif family like 1 ASSOCIATED WITH prostate cancer (ortholog) NW_004955403 21043233 21050261 - 102013678 AGCD01002179;GBDF01054116;XM_005373423;XM_005373424 XP_005373480;XP_005373481 MODEL 10256008 pseudo LOC106150075 cytoskeleton-associated protein 2 pseudogene NW_004955464 7274411 7276209 - 106150075 AGCD01050057 MODEL 8818191 protein-coding LOC102019604 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase ENCODES a protein that exhibits sterol 12-alpha-hydroxylase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); positive regulation of intestinal cholesterol absorption (ortholog); response to cholesterol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); extrahepatic cholestasis (ortholog) NW_004955420 27988067 27990637 + 102019604 AGCD01021466;GBCQ01087698;XM_005383508 XP_005383565 MODEL 8959157 pseudo LOC102005203 tetraspanin-3 pseudogene NW_004955402 42278428 42282472 + 102005203 AGCD01001038 MODEL 8874336 ncrna LOC102003471 uncharacterized LOC102003471 NW_004955428 13113557 13178517 - 102003471 AGCD01027942;AGCD01027943;AGCD01027944;GBDI01311971;XR_001234449;XR_001234450;XR_261299 MODEL 8968114 protein-coding Aldh3b1 aldehyde dehydrogenase 3 family member B1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN aldehyde catabolic process (ortholog); cellular response to oxidative stress (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955422 17786495 17801014 - 102008116 AGCD01022932;GBDI01017322;XM_005384290;XM_005384291 XP_005384347;XP_005384348 MODEL 39133906 misc_rna 7SK 7SK RNA 8966936 protein-coding Retreg3 reticulophagy regulator family member 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); endoplasmic reticulum tubular network organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum tubular network (ortholog); protein-containing complex (ortholog) NW_004955451 16468845 16486773 - 102020406 AGCD01043679;AGCD01043680;GBBH01145983;XM_005394466 XP_005394523 MODEL 8757645 protein-coding Cgref1 cell growth regulator with EF-hand domain 1 INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog) NW_004955469 9072333 9086427 - 102019381 AGCD01052489;GBCE01148200;XM_005400451;XM_005400452 XP_005400508;XP_005400509 MODEL 39132337 rrna 5S_rRNA 5S ribosomal RNA 39134172 misc_rna 7SK 7SK RNA 8767100 pseudo LOC102017259 40S ribosomal protein SA pseudogene NW_004955504 5078215 5079108 + 102017259 AGCD01064895;XR_264295 MODEL 8990815 ncrna LOC102009994 uncharacterized LOC102009994 NW_004955551 302834 319846 + 102009994 AGCD01072654;GBDF01089175;XR_264922 MODEL 8857812 protein-coding Wdr17 WD repeat domain 17 ASSOCIATED WITH Liver Neoplasms (ortholog) NW_004955403 31559972 31658899 - 102017620 AGCD01002421;AGCD01002422;GBDK01228794;XM_005373519;XM_005373520;XM_005373521 XP_005373576;XP_005373577;XP_005373578 MODEL 8913623 protein-coding Aplp2 amyloid beta precursor like protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); extracellular matrix organization (ortholog); forebrain development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Myocardial Ischemia (ortholog); Nerve Degeneration (ortholog); FOUND IN nucleus (ortholog); spine apparatus (ortholog) NW_004955412 31043320 31075617 + 102020897 AGCD01013323;GBCQ01009463;XM_005378559;XM_005378560;XM_005378561;XM_005378562 XP_005378616;XP_005378617;XP_005378618;XP_005378619 MODEL 8978338 protein-coding Bach2 BACH transcriptional regulator 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN import into nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); primary adaptive immune response involving T cells and B cells (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); celiac disease (ortholog); Crohn's disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955411 16607546 16947359 - 102009920 AGCD01011978;AGCD01011979;AGCD01011980;AGCD01011981;AGCD01011982;AGCD01011983;GBDJ01370411;XM_005377762;XM_005377763;XM_005377764;XM_013510775;XM_013510776;XM_013510777 XP_005377819;XP_005377820;XP_005377821;XP_013366229;XP_013366230;XP_013366231 MODEL 8720376 protein-coding LOC102005953 olfactory receptor 5B2-like NW_004955511 3211089 3212036 - 102005953 AGCD01066450;XM_013506385 XP_013361839 MODEL 10340611 ncrna LOC106147097 uncharacterized LOC106147097 NW_004955518 1919365 1939005 - 106147097 AGCD01067769;GBDF01265857;XR_001231837 MODEL 8985981 protein-coding Ascc1 activating signal cointegrator 1 complex subunit 1 INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); centronuclear myopathy (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955437 19381279 19487057 + 102030123 AGCD01034847;AGCD01034848;AGCD01034849;AGCD01034850;AGCD01034851;AGCD01034852;AGCD01034853;AGCD01034854;AGCD01034855;GBDF01002453;XM_005390016;XM_013516956;XM_013516958 XP_005390073;XP_013372410;XP_013372412 MODEL 39132993 snrna U1 U1 spliceosomal RNA 8856885 protein-coding Dnaja2 DnaJ heat shock protein family (Hsp40) member A2 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-folding chaperone binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN carbon tetrachloride metabolic process (ortholog); protein refolding (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH liver disease (ortholog); FOUND IN cytosol (ortholog) NW_004955474 8180995 8202169 + 102011534 AGCD01054544;AGCD01054545;GBDF01004147;XM_005401411 XP_005401468 MODEL 8814636 protein-coding LOC102021406 histone H2A INVOLVED IN mRNA processing (ortholog); nucleosome assembly (ortholog); FOUND IN euchromatin (ortholog); nucleosome (ortholog) NW_004955593 911641 911919 + 102021406 AGCD01076404;GBDF01010904;GBDJ01218416;XM_005414637 XP_005414694 MODEL 8826414 protein-coding Ptchd3 patched domain containing 3 FOUND IN endoplasmic reticulum (ortholog); sperm midpiece (ortholog) NW_004955476 11870822 11895903 - 102004160 AGCD01055475;GBDF01052329;XM_005401894 XP_005401951 MODEL 39131684 rrna 5S_rRNA 5S ribosomal RNA 8803121 protein-coding Gpaa1 glycosylphosphatidylinositol anchor attachment 1 ENCODES a protein that exhibits GPI anchor binding (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Glycosylphosphatidylinositol Biosynthesis Defect 15 (ortholog); FOUND IN endoplasmic reticulum (ortholog); GPI-anchor transamidase complex (ortholog) NW_004955454 2735463 2738956 + 102020753 AGCD01045029;GBBH01088884;XM_005395839 XP_005395896 MODEL 9025702 protein-coding Pdgfa platelet derived growth factor subunit A ENCODES a protein that exhibits collagen binding (ortholog); growth factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN ceramide signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); microvillus (ortholog) NW_004955460 8328400 8346755 - 102008921 AGCD01048514;AGCD01048515;GBDF01074297;XM_005397774;XM_005397776;XM_013521277;XM_013521278;XM_013521280;XM_013521281;XM_013521282 XP_005397831;XP_005397833;XP_013376731;XP_013376732;XP_013376734;XP_013376735;XP_013376736 MODEL 8725467 protein-coding LOC102012389 PRAME family member 6-like NW_004955618 32981 36268 - 102012389 AGCD01077283;AGCD01077284;XM_013510147 XP_013365601 MODEL 39134481 misc_rna 7SK 7SK RNA 8798755 protein-coding LOC102018018 calcium-binding mitochondrial carrier protein SCaMC-1-like NW_004955435 11949742 12009579 - 102018018 AGCD01033128;AGCD01033129;GBDF01155495;XM_005388828;XM_013516552;XM_013516554;XM_013516555 XP_005388885;XP_013372006;XP_013372008;XP_013372009 MODEL 9012137 ncrna LOC102024113 uncharacterized LOC102024113 NW_004955418 18836977 18846965 - 102024113 AGCD01019183;GBDF01179969;XR_260571 MODEL 8740140 pseudo LOC102019921 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955420 2725878 2732123 + 102019921 AGCD01020607 MODEL 8849954 protein-coding Sesn2 sestrin 2 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); L-leucine binding (ortholog); peroxidase activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); Hepatomegaly (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytoplasm (ortholog); GATOR2 complex (ortholog) NW_004955452 7392644 7417204 + 102014203 AGCD01044151;AGCD01044152;AGCD01044153;AGCD01044154;GBBH01131789;GBDF01160814;XM_005394946 XP_005395003 MODEL 8723474 protein-coding Gdf10 growth differentiation factor 10 INVOLVED IN cerebellum development (ortholog); fat cell differentiation (ortholog); negative regulation of ossification (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); Breast Neoplasms (ortholog); Mesothelioma (ortholog); FOUND IN extracellular space (ortholog) NW_004955556 2185121 2195150 + 102013654 AGCD01073208;GBCE01004420;XM_005412611 XP_005412668 MODEL 9002193 protein-coding Kif16b kinesin family member 16B ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); early endosome to late endosome transport (ortholog); endoderm development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); muscular atrophy (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955415 25449734 25740697 - 102006573 AGCD01016581;AGCD01016582;AGCD01016583;AGCD01016584;AGCD01016585;GBDJ01355401;XM_005380898;XM_013512329;XM_013512330;XM_013512331;XM_013512332 XP_005380955;XP_013367783;XP_013367784;XP_013367785;XP_013367786 MODEL 9045238 protein-coding Trpc1 transient receptor potential cation channel subfamily C member 1 ENCODES a protein that exhibits ATPase binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); cellular response to hypoxia (ortholog); melanin biosynthetic process (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Diabetic Nephropathies (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN basolateral plasma membrane (ortholog); costamere (ortholog); cytoplasm (ortholog) NW_004955508 3143868 3211613 - 102013194 AGCD01065805;GBCE01163015;GBDF01158759;XM_005407739 XP_005407796 MODEL 9052001 protein-coding LOC102009995 CMRF35-like molecule 6 NW_004955553 1453306 1458327 + 102009995 AGCD01072882;GBDK01277584;XM_005412239 XP_005412296 MODEL 8768936 pseudo LOC102005954 ZZ-type zinc finger-containing protein 3 pseudogene NW_004955430 8912029 8917478 - 102005954 AGCD01029398 MODEL 8761541 protein-coding Adam15 ADAM metallopeptidase domain 15 ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); integrin binding (ortholog); metallopeptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cardiac epithelial to mesenchymal transition (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH Brain Hypoxia (ortholog); COVID-19 (ortholog); osteoarthritis (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog) NW_004955545 1545532 1555826 + 102018984 AGCD01071859;GBCE01135021;XM_005411543;XM_005411548;XM_005411549;XM_005411553;XM_005411555;XM_013508296;XM_013508297;XM_013508298;XR_001232186;XR_001232187;XR_001232188;XR_264868 XP_005411600;XP_005411605;XP_005411606;XP_005411610;XP_005411612;XP_013363750;XP_013363751;XP_013363752 MODEL 39131472 protein-coding TRIML2 tripartite motif family like 2 8908862 pseudo LOC102007015 chromobox protein homolog 3 pseudogene NW_004955419 1378119 1378641 + 102007015 AGCD01019647 MODEL 8996816 protein-coding Fibp FGF1 intracellular binding protein ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN platelet aggregation (ortholog); ASSOCIATED WITH coloboma (ortholog); genetic disease (ortholog); THAUVIN-ROBINET-FAIVRE SYNDROME (ortholog); FOUND IN membrane (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955422 19435528 19440095 + 102025589 AGCD01023006;GBDF01048191;XM_005384449;XM_005384450;XM_005384451 XP_005384506;XP_005384507;XP_005384508 MODEL 9041949 protein-coding Ipo9 importin 9 ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); nuclear import signal receptor activity (ortholog); INVOLVED IN proteasome localization (ortholog); protein import into nucleus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955406 37898415 37946991 + 102018890 AGCD01006580;GBDF01003416;XM_005375192;XM_005375193 XP_005375249;XP_005375250 MODEL 8974473 protein-coding Atp5po ATP synthase peripheral stalk subunit OSCP ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); estradiol binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to cytokine stimulus (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955407 33288194 33298817 - 102025210 AGCD01007697;GBCQ01008219;XM_005375698 XP_005375755 MODEL 8803216 protein-coding Plcxd1 phosphatidylinositol specific phospholipase C X domain containing 1 NW_004955499 574421 585386 + 102023053 AGCD01063242;AGCD01063243;AGCD01063244;GBDK01020725;GBDK01033039;XM_013505584;XM_013505585;XM_013505586;XM_013505587;XM_013505588 XP_013361038;XP_013361039;XP_013361040;XP_013361041;XP_013361042 MODEL 8707038 protein-coding Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955458 14199912 14201712 + 102027496 AGCD01047829;GBDF01187898;GBDJ01087414;XM_013520977 XP_013376431 MODEL 8952184 ncrna LOC102012393 uncharacterized LOC102012393 NW_004955403 55119286 55129586 - 102012393 AGCD01003110;GBDF01159103;XR_001234447;XR_259276 MODEL 9034106 protein-coding Hdx highly divergent homeobox NW_004955529 3468132 3642886 - 102021795 AGCD01069795;AGCD01069796;AGCD01069797;AGCD01069798;AGCD01069799;AGCD01069800;GBDF01022935;XM_005410080 XP_005410137 MODEL 8988444 protein-coding Aldh4a1 aldehyde dehydrogenase 4 family member A1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); L-glutamate gamma-semialdehyde dehydrogenase activity (ortholog); INVOLVED IN L-proline catabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); hyperprolinemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955527 338593 369528 + 102016842 AGCD01069382;AGCD01069383;GBDF01128157;XM_005409797 XP_005409854 MODEL 8998604 protein-coding Retsat retinol saturase ENCODES a protein that exhibits all-trans-retinol 13,14-reductase activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); retinol metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Simpson-Golabi-Behmel syndrome type 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog); nuclear outer membrane (ortholog) NW_004955424 2107602 2122029 + 102004946 AGCD01024262;AGCD01024263;GBDF01226131;XM_005385436 XP_005385493 MODEL 8996328 protein-coding Hmmr hyaluronan mediated motility receptor ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN hyaluronan catabolic process (ortholog); receptor-mediated endocytosis (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 16865066 16895918 + 102004899 AGCD01008448;GBDF01157808;XM_005376280 XP_005376337 MODEL 9042431 protein-coding LOC102010782 cytochrome P450 4A6-like NW_004955464 11443634 11459566 + 102010782 AGCD01050154;GBCQ01010107;XM_005398643 XP_005398700 MODEL 8768711 ncrna LOC102024114 uncharacterized LOC102024114 NW_004955483 8673978 8681030 - 102024114 AGCD01057842;GBDF01306700;XR_001231015;XR_001231016;XR_263875 MODEL 8914651 protein-coding Adss2 adenylosuccinate synthase 2 ENCODES a protein that exhibits adenylosuccinate synthase activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); AMP biosynthetic process (ortholog); cellular response to electrical stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH sarcoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 7684979 7715179 - 102007403 AGCD01005774;GBDF01047341;XM_005374781 XP_005374838 MODEL 8718414 protein-coding Thsd4 thrombospondin type 1 domain containing 4 INVOLVED IN elastic fiber assembly (ortholog); microfibril assembly (ortholog); ASSOCIATED WITH asthma (ortholog); Familial Thoracic Aortic Aneurysm 12 (ortholog); substance-related disorder (ortholog); FOUND IN extracellular matrix (ortholog); microfibril (ortholog) NW_004955450 5296670 5827252 - 102009131 AGCD01042499;AGCD01042500;AGCD01042501;AGCD01042502;AGCD01042503;AGCD01042504;AGCD01042505;AGCD01042506;AGCD01042507;AGCD01042508;AGCD01042509;AGCD01042510;GBBH01142626;GBCQ01066873;XM_013518949 XP_013374403 MODEL 10304148 protein-coding Fam237a family with sequence similarity 237 member A NW_004955457 8335357 8340060 - 106149909 AGCD01046907;XM_013520663 XP_013376117 MODEL 8905735 protein-coding Apmap adipocyte plasma membrane associated protein ENCODES a protein that exhibits arylesterase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) NW_004955415 31089413 31108657 - 102009044 AGCD01016669;GBDF01228097;XM_005380982 XP_005381039 MODEL 8762203 protein-coding Bad BCL2 associated agonist of cell death ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); cysteine-type endopeptidase activator activity (ortholog); lipid binding (ortholog); INVOLVED IN ADP metabolic process (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955422 20795585 20809039 + 102014914 AGCD01023087;AGCD01023088;AGCD01023089;GBDF01008867;XM_005384615;XM_005384616;XM_005384617;XM_005384618;XM_005384619;XM_005384620;XM_013514299 XP_005384672;XP_005384673;XP_005384674;XP_005384675;XP_005384676;XP_005384677;XP_013369753 MODEL 10346803 protein-coding LOC106150076 collagen alpha-2(I) chain-like NW_004955464 8489993 8492743 - 106150076 AGCD01050088;GBDF01197430;XM_013521576 XP_013377030 MODEL 39132994 snrna U1 U1 spliceosomal RNA 8906378 pseudo LOC102009996 cytochrome P450 2B4-like NW_004955555 49910 64514 - 102009996 AGCD01073023 MODEL 8754211 ncrna LOC102015020 uncharacterized LOC102015020 NW_004955422 14896129 14910270 + 102015020 AGCD01022872;AGCD01022873;GBDF01015933;XR_001234001;XR_260883 MODEL 39131685 rrna 5S_rRNA 5S ribosomal RNA 8871146 protein-coding Bid BH3 interacting domain death agonist ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); extrinsic apoptotic signaling pathway (ortholog); glial cell apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); bronchopulmonary dysplasia (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955454 5776656 5785500 - 102005665 AGCD01045187;AGCD01045188;GBCB01130016;GBDJ01272354;XM_013520182 XP_013375636 MODEL 8920943 protein-coding Ptchd4 patched domain containing 4 NW_004955437 12253731 12423865 - 102014709 AGCD01034603;AGCD01034604;AGCD01034605;AGCD01034606;AGCD01034607;AGCD01034608;GBDF01162944;XM_005389880 XP_005389937 MODEL 39132342 rrna 5S_rRNA 5S ribosomal RNA 8737027 protein-coding Pdgfb platelet derived growth factor subunit B ENCODES a protein that exhibits chemoattractant activity (ortholog); collagen binding (ortholog); growth factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955413 25150702 25166987 - 102027508 AGCD01014397;GBCE01152520;GBDK01085597;XM_005379284 XP_005379341 MODEL 9042708 protein-coding Adam17 ADAM metallopeptidase domain 17 ENCODES a protein that exhibits cytokine binding (ortholog); endopeptidase activity (ortholog); integrin binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); B cell differentiation (ortholog); cell adhesion (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); atopic dermatitis (ortholog); Blister (ortholog); FOUND IN actin cytoskeleton (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955487 5180241 5218298 - 102024344 AGCD01059322;GBDK01129567;XM_005404397;XM_013504340;XM_013504341 XP_005404454;XP_013359794;XP_013359795 MODEL 8730800 protein-coding Ttc38 tetratricopeptide repeat domain 38 NW_004955413 30391385 30411210 + 102010791 AGCD01014608;GBCE01001497;XM_005379507;XM_013511392 XP_005379564;XP_013366846 MODEL 39133297 snrna U4 U4 spliceosomal RNA 39134482 misc_rna 7SK 7SK RNA 8950279 protein-coding LOC102022413 synaptotagmin-15 NW_004955510 6130901 6145832 - 102022413 AGCD01066302;GBDF01305008;XM_005415248 XP_005415305 MODEL 8822652 protein-coding Wdr18 WD repeat domain 18 FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 6869543 6877058 - 102014147 AGCD01062099;GBCQ01121381;XM_005406002 XP_005406059 MODEL 8705583 protein-coding Caskin2 CASK interacting protein 2 FOUND IN plasma membrane (ortholog) NW_004955553 2353767 2367357 - 102027793 AGCD01072935;GBCQ01038679;XM_005412298;XM_005412299;XM_013508626 XP_005412355;XP_005412356;XP_013364080 MODEL 10255986 ncrna LOC106147098 uncharacterized LOC106147098 NW_004955518 4673408 4680733 - 106147098 AGCD01067835;GBCQ01139426;XR_001231839 MODEL 9033234 protein-coding Tp63 tumor protein p63 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); epidermis development (ortholog); epithelial cell development (ortholog); PARTICIPATES IN altered p53 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); ADULT syndrome (ortholog); Ankyloblepharon Filiforme Adnatum (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955420 18178639 18384786 - 102017241 AGCD01021040;AGCD01021041;AGCD01021042;AGCD01021043;AGCD01021044;GBDI01256795;XM_005383230;XM_005383231;XM_005383232;XM_005383233;XM_005383234;XM_005383235;XM_013513584 XP_005383287;XP_005383288;XP_005383289;XP_005383290;XP_005383291;XP_005383292;XP_013369038 MODEL 8927694 protein-coding Plcxd2 phosphatidylinositol specific phospholipase C X domain containing 2 NW_004955427 12094403 12143557 + 102021373 AGCD01027203;AGCD01027204;GBDF01277030;XM_005386368;XM_005386369;XM_013515219 XP_005386425;XP_005386426;XP_013370673 MODEL 8716432 protein-coding Gdf11 growth differentiation factor 11 INVOLVED IN activin receptor signaling pathway (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Myocardial Reperfusion Injury (ortholog); orofacial cleft (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog) NW_004955458 3388402 3398040 + 102026079 AGCD01047301;GBBH01160450;GBDJ01213704;XM_005397510 XP_005397567 MODEL 8848006 protein-coding LOC102005204 PRAME family member 12-like NW_004955608 68987 90514 - 102005204 AGCD01077000;XM_013510117 XP_013365571 MODEL 8878168 protein-coding LOC102019609 sulfotransferase 1A1 NW_004955493 6774927 6778161 - 102019609 AGCD01061137;GBCB01070177;XM_005405179;XM_013504816 XP_005405236;XP_013360270 MODEL 39134483 misc_rna 7SK 7SK RNA 8820864 protein-coding LOC102003475 olfactory receptor 5D18-like NW_004955511 551616 552566 - 102003475 AGCD01066333;XM_005408199 XP_005408256 MODEL 8756821 protein-coding Ascc2 activating signal cointegrator 1 complex subunit 2 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); FOUND IN cytosolic ribosome (ortholog); nucleus (ortholog); RQC-trigger complex (ortholog) NW_004955455 4032357 4077900 - 102012058 AGCD01045664;AGCD01045665;AGCD01045666;GBDK01230854;XM_005396225;XM_013520428;XM_013520429;XM_013520430;XM_013520431 XP_005396282;XP_013375882;XP_013375883;XP_013375884;XP_013375885 MODEL 39133907 misc_rna 7SK 7SK RNA 8924526 protein-coding Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); GTPase regulator activity (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic process (ortholog); cellular senescence (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955442 12971031 13002605 - 102010950 AGCD01037753;GBCB01002868;XM_005391293;XM_005391294 XP_005391350;XP_005391351 MODEL 8759072 protein-coding Gpalpp1 GPALPP motifs containing 1 NW_004955518 2801528 2832207 + 102012467 AGCD01067784;AGCD01067785;GBDF01306250;XM_005409079;XM_005409080 XP_005409136;XP_005409137 MODEL 9009845 protein-coding LOC102017261 methyl-CpG-binding domain protein 2-like NW_004955508 3893058 3893695 + 102017261 AGCD01065844;GBDF01044469;XM_013506248 XP_013361702 MODEL 39134173 misc_rna 7SK 7SK RNA 8820151 protein-coding Cgrrf1 cell growth regulator with ring finger domain 1 INVOLVED IN negative regulation of cell growth (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleoplasm (ortholog) NW_004955409 8939793 8966351 - 102003736 AGCD01009426;GBDJ01421140;XM_005376766;XM_005376767 XP_005376823;XP_005376824 MODEL 9058965 protein-coding Ipp intracisternal A particle-promoted polypeptide ASSOCIATED WITH Colorectal Neoplasms (ortholog) NW_004955464 12562824 12589976 + 102027054 AGCD01050207;AGCD01050208;AGCD01050209;AGCD01050210;GBBH01138930;GBDF01077438;XM_005398697;XM_013521582;XM_013521583 XP_005398754;XP_013377036;XP_013377037 MODEL 8700900 protein-coding ATP6 ATP synthase F0 subunit 6 MT 7932 8612 + 15822207 JX312692 AFQ55782;YP_008080750 REVIEWED 8870975 protein-coding Sesn3 sestrin 3 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); GATOR2 complex (ortholog); TORC2 complex (ortholog) NW_004955412 100335 125395 - 102027390 AGCD01012481;GBBH01141125;GBDF01041588;XM_013511114 XP_013366568 MODEL 39132341 snrna U6 U6 spliceosomal RNA 8716390 protein-coding Kif17 kinesin family member 17 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); microtubule-based process (ortholog); protein-containing complex localization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955452 1197839 1239209 - 102021077 AGCD01043836;GBDK01380952;XM_005394685;XM_005394686;XM_013519654;XM_013519655;XM_013519656;XM_013519657;XM_013519658;XM_013519659 XP_005394742;XP_005394743;XP_013375108;XP_013375109;XP_013375110;XP_013375111;XP_013375112;XP_013375113 MODEL 8925148 pseudo LOC102021413 40S ribosomal protein S16 pseudogene NW_004955404 19244236 19244674 + 102021413 AGCD01003639 MODEL 9045075 protein-coding Aldh5a1 aldehyde dehydrogenase 5 family member A1 ENCODES a protein that exhibits carboxylic acid binding (ortholog); identical protein binding (ortholog); NAD binding (ortholog); INVOLVED IN central nervous system development (ortholog); gamma-aminobutyric acid catabolic process (ortholog); gamma-aminobutyric acid metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autism spectrum disorder (ortholog); dystonia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955483 2467425 2494416 - 102007230 AGCD01057678;GBCE01045506;GBCQ01039671;XM_005403428 XP_005403485 MODEL 8720941 ncrna LOC102005963 uncharacterized LOC102005963 NW_004955526 3269899 3285554 + 102005963 AGCD01069333;AGCD01069334;GBDI01352716;XR_001231967;XR_001231968;XR_264661 MODEL 10340616 ncrna LOC106147099 uncharacterized LOC106147099 NW_004955518 2220337 2275347 + 106147099 AGCD01067772;AGCD01067773;AGCD01067774;AGCD01067775;GBDF01041824;XR_001231849 MODEL 8938628 protein-coding Thsd7a thrombospondin type 1 domain containing 7A INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); FOUND IN plasma membrane (ortholog); podocyte foot (ortholog) NW_004955432 17896273 18111903 - 102003051 AGCD01031132;AGCD01031133;AGCD01031134;GBCE01162918;GBDJ01062851;XM_005388151 XP_005388208 MODEL 8873585 protein-coding Triml2 tripartite motif family like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to retinoic acid (ortholog) NW_004955403 21089194 21104840 + 102006531 AGCD01002180;GBDF01242145;XM_013514804 XP_013370258 MODEL 39131686 rrna 5S_rRNA 5S ribosomal RNA 8926968 ncrna LOC102019922 uncharacterized LOC102019922 NW_004955421 21691485 21692961 + 102019922 AGCD01022115;GBDF01236999;XR_260803;XR_260804 MODEL 39132346 rrna 5S_rRNA 5S ribosomal RNA 8766947 protein-coding LOC102012401 myotubularin-related protein 3-like NW_004955455 4250135 4256614 - 102012401 AGCD01045673;GBDK01132871;XM_005396226;XM_005396227 XP_005396283;XP_005396284 MODEL 39133306 snrna U4 U4 spliceosomal RNA 9019940 protein-coding Pdgfc platelet derived growth factor C ENCODES a protein that exhibits platelet-derived growth factor receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN activation of transmembrane receptor protein tyrosine kinase activity (ortholog); animal organ morphogenesis (ortholog); bone development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Mesothelioma (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955471 10318683 10500624 + 102012527 AGCD01053230;AGCD01053231;AGCD01053232;GBDJ01333029;XM_005400945;XM_013522907;XM_013522908;XM_013522909 XP_005401002;XP_013378361;XP_013378362;XP_013378363 MODEL 8973382 protein-coding Adam18 ADAM metallopeptidase domain 18 NW_004955536 3014457 3109257 - 102018976 AGCD01070806;AGCD01070807;AGCD01070808;AGCD01070809;GBDF01051796;XM_005410540;XM_013507734;XM_013507735;XM_013507736;XM_013507737;XM_013507738;XM_013507739;XM_013507740;XM_013507741;XM_013507742 XP_005410597;XP_013363188;XP_013363189;XP_013363190;XP_013363191;XP_013363192;XP_013363193;XP_013363194;XP_013363195;XP_013363196 MODEL 8943019 protein-coding Trpc3 transient receptor potential cation channel subfamily C member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-activated cation channel activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); positive regulation of calcium ion transport into cytosol (ortholog); positive regulation of cardiac muscle hypertrophy in response to stress (ortholog); ASSOCIATED WITH Albuminuria (ortholog); bipolar disorder (ortholog); cerebellar ataxia type 41 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955428 18628951 18678525 + 102017360 AGCD01028069;GBCB01100950;XM_005386779;XM_013515247 XP_005386836;XP_013370701 MODEL 8864331 protein-coding LOC102022414 membrane-spanning 4-domains subfamily A member 4A NW_004955511 5154898 5183422 + 102022414 AGCD01066549;GBDI01285041;XM_005408087;XM_005408088;XM_005408089;XM_013506507 XP_005408144;XP_005408145;XP_005408146;XP_013361961 MODEL 8933218 protein-coding Rev1 REV1 DNA directed polymerase ENCODES a protein that exhibits deoxycytidyl transferase activity (ortholog); DNA binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); error-prone translesion synthesis (ortholog); FOUND IN nuclear replication fork (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955470 5677222 5738362 - 102013164 AGCD01052758;AGCD01052759;GBDJ01313280;XM_005400749;XM_005400750;XM_005400751 XP_005400806;XP_005400807;XP_005400808 MODEL 10145238 protein-coding Fam240a family with sequence similarity 240 member A NW_004955420 25461700 25468516 - 106148366 AGCD01021359;GBCB01077551;XM_013513493;XM_013513494 XP_013368947;XP_013368948 MODEL 10215007 protein-coding LOC106150077 collagen alpha-1(II) chain-like NW_004955464 10610938 10615084 - 106150077 AGCD01050126;AGCD01050127;XM_013521577 XP_013377031 MODEL 9025810 protein-coding Casp14 caspase 14 ASSOCIATED WITH Autosomal Recessive Congenital Ichthyosis 12 (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955495 8214512 8221124 - 102013186 AGCD01062190;GBCC01000472;XM_005406098;XM_005406099 XP_005406155;XP_005406156 MODEL 8707990 ncrna LOC102018022 uncharacterized LOC102018022 NW_004955533 900860 904030 - 102018022 AGCD01070334;GBDF01261009;XR_264740 MODEL 8724588 protein-coding LOC102007016 2'-5'-oligoadenylate synthase 1-like NW_004955482 9316087 9321788 + 102007016 AGCD01057564;AGCD01057565;GBBH01096422;GBDI01244956;XM_013503740 XP_013359194 MODEL 9052174 protein-coding Bag1 BAG cochaperone 1 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); phosphoprotein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of motor neuron apoptotic process (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); cervix carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955472 2394317 2405199 + 102015835 AGCD01053458;AGCD01053459;GBDF01006247;GBDJ01083605;XM_013522952;XM_013522953 XP_013378406;XP_013378407 MODEL 8756803 protein-coding LOC102010001 seminal vesicle protein SVP-2-like NW_004955445 12108842 12114494 - 102010001 AGCD01039738;GBDK01186241;XM_005392441 XP_005392498 MODEL 8788760 protein-coding Ficd FIC domain protein adenylyltransferase ENCODES a protein that exhibits AMPylase activity (ortholog); ATP binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN protein adenylylation (ortholog); regulation of IRE1-mediated unfolded protein response (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 92 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955455 9794919 9799006 + 102023776 AGCD01045930;GBDF01086000;XM_005396460;XM_005396461;XM_005396462;XM_013520486 XP_005396517;XP_005396518;XP_005396519;XP_013375940 MODEL 8791168 protein-coding LOC102015023 olfactory receptor 7G3-like NW_004955495 200959 201891 - 102015023 AGCD01061608;XM_013505198 XP_013360652 MODEL 8795683 protein-coding Bik BCL2 interacting killer ENCODES a protein that exhibits BH domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); male gonad development (ortholog); positive regulation of protein-containing complex assembly (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); colon cancer (ortholog); FOUND IN mitochondrial envelope (ortholog) NW_004955413 28277727 28294032 + 102015396 AGCD01014555;GBDK01226774;XM_005379433 XP_005379490 MODEL 39133908 misc_rna 7SK 7SK RNA 8892458 protein-coding Aldh6a1 aldehyde dehydrogenase 6 family member A1 ENCODES a protein that exhibits methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity (ortholog); thiolester hydrolase activity (ortholog); INVOLVED IN beta-alanine catabolic process (ortholog); brown fat cell differentiation (ortholog); L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); autism spectrum disorder (ortholog); Methylmalonate Semialdehyde Dehydrogenase Deficiency (ortholog); FOUND IN mitochondrion (ortholog) NW_004955523 1343545 1369080 + 102021166 AGCD01068514;GBDK01130133;XM_005409401;XM_013507128 XP_005409458;XP_013362582 MODEL 9006661 protein-coding Ascc3 activating signal cointegrator 1 complex subunit 3 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN DNA alkylation repair (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH Autosomal Recessive Intellectual Developmental Disorder 81 (ortholog); congenital myopathy (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); nucleus (ortholog) NW_004955411 26305103 26599375 - 102026727 AGCD01012178;AGCD01012179;AGCD01012180;GBCB01058124;XM_005377812;XM_005377813;XM_005377814 XP_005377869;XP_005377870;XP_005377871 MODEL 39131473 protein-coding CH25H cholesterol 25-hydroxylase 9057200 protein-coding Heatr1 HEAT repeat containing 1 INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH glioblastoma (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955492 3627889 3672269 + 102017462 AGCD01060699;GBDF01127751;XM_005404930;XM_005404931 XP_005404987;XP_005404988 MODEL 8827968 protein-coding Trio trio Rho guanine nucleotide exchange factor ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of fat cell differentiation (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955426 3647273 3846916 + 102008555 AGCD01026083;AGCD01026084;GBCQ01175997;XM_005386123;XM_013514974 XP_005386180;XP_013370428 MODEL 9004375 protein-coding Atp6ap1 ATPase H+ transporting accessory protein 1 ENCODES a protein that exhibits molecular function activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); endosome to plasma membrane protein transport (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ii (ortholog); congenital disorder of glycosylation type II (ortholog); follicular lymphoma (ortholog); FOUND IN endosome membrane (ortholog); membrane (ortholog); synaptic vesicle membrane (ortholog) NW_004955580 927546 934633 + 102030685 AGCD01075630;GBDF01086635;XM_005414198 XP_005414255 MODEL 8794334 protein-coding Apoa1 apolipoprotein A1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein A-I receptor binding (ortholog); apolipoprotein receptor binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta formation (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; forkhead class A signaling pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Acute Tubulointerstitial Nephritis (ortholog); adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); discoidal high-density lipoprotein particle (ortholog) NW_004955412 18170331 18172298 - 102023342 AGCD01012927;GBDJ01086480;XM_005378193 P0DMS2;XP_005378250 MODEL 9014895 protein-coding Sestd1 SEC14 and spectrin domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN calcium channel complex (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955403 17761404 17835528 + 102023421 AGCD01002086;AGCD01002087;GBDK01231007;XM_005373365;XM_005373367;XM_013512590 XP_005373422;XP_005373424;XP_013368044 MODEL 39132999 snrna U1 U1 spliceosomal RNA 8920125 protein-coding Plcxd3 phosphatidylinositol specific phospholipase C X domain containing 3 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) NW_004955426 25563222 25719939 - 102026768 AGCD01026723;AGCD01026724;AGCD01026725;AGCD01026726;AGCD01026727;AGCD01026728;GBCQ01014740;XM_005386247 XP_005386304 MODEL 39134484 misc_rna 7SK 7SK RNA 8831670 protein-coding Tp73 tumor protein p73 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); kidney development (ortholog); PARTICIPATES IN altered p53 signaling pathway; Ras mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); adult T-cell leukemia/lymphoma (ortholog); alveolar rhabdomyosarcoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955486 7914608 7961992 - 102025470 AGCD01059140;AGCD01059141;GBDJ01182267;XM_005404142;XM_005404143 XP_005404199;XP_005404200 MODEL 8722008 protein-coding LOC102019611 zinc finger protein 260-like NW_004955495 925423 929850 - 102019611 AGCD01061661;GBDJ01370795;GBDK01143905;XM_013505071 XP_013360525 MODEL 9016185 pseudo LOC102017265 DNA/RNA-binding protein KIN17-like NW_004955433 1919102 1920486 - 102017265 AGCD01031373 MODEL 8924180 protein-coding Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear speck (ortholog) NW_004955406 42190043 42199323 + 102020880 AGCD01006697;GBDF01047346;XM_005375399;XM_005375400;XM_005375402;XM_013502732 XP_005375456;XP_005375457;XP_005375459;XP_013358186 MODEL 8756630 protein-coding Gpam glycerol-3-phosphate acyltransferase, mitochondrial ENCODES a protein that exhibits glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); cellular response to insulin stimulus (ortholog); defense response to virus (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); Hypertriglyceridemia (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955431 17291890 17363611 - 102027100 AGCD01030406;AGCD01030407;GBCB01076097;XM_005387756;XM_005387757;XM_005387758;XM_005387759;XM_013515885 XP_005387813;XP_005387814;XP_005387815;XP_005387816;XP_013371339 MODEL 8736420 protein-coding Thsd7b thrombospondin type 1 domain containing 7B ASSOCIATED WITH Ehlers-Danlos syndrome classic type 1 (ortholog) NW_004955440 4054497 4834962 + 102012029 AGCD01036255;AGCD01036256;AGCD01036257;AGCD01036258;AGCD01036259;AGCD01036260;AGCD01036261;AGCD01036262;AGCD01036263;AGCD01036264;AGCD01036265;AGCD01036266;AGCD01036267;AGCD01036268;AGCD01036269;GBBH01217705;XM_013517433 XP_013372887 MODEL 8934344 protein-coding Ptcra pre T cell antigen receptor alpha INVOLVED IN alpha-beta T cell differentiation (ortholog); negative regulation of thymocyte apoptotic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Immunodeficiency 126 (ortholog); polycystic ovary syndrome (ortholog); Zellweger syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 8920997 8927354 + 102025508 AGCD01034507;GBCQ01091734;XM_005389728;XM_005389729;XM_005389730;XM_005389731;XM_005389732;XM_013516772 XP_005389785;XP_005389786;XP_005389787;XP_005389788;XP_005389789;XP_013372226 MODEL 39131687 rrna 5S_rRNA 5S ribosomal RNA 8916683 pseudo LOC102015027 ER degradation-enhancing alpha-mannosidase-like protein 1 pseudogene NW_004955425 1643600 1644877 - 102015027 AGCD01025237 MODEL 8904569 pseudo LOC102010786 sodium- and chloride-dependent creatine transporter 1 pseudogene NW_004955412 1303340 1305225 + 102010786 AGCD01012514;XM_005378613 MODEL 8942528 protein-coding Ippk inositol-pentakisphosphate 2-kinase ENCODES a protein that exhibits inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN nucleolus (ortholog) NW_004955515 5170164 5219130 + 102029103 AGCD01067342;AGCD01067343;GBDJ01189661;XM_005408913;XM_005408914;XM_013506872 XP_005408970;XP_005408971;XP_013362326 MODEL 39133909 misc_rna 7SK 7SK RNA 8801756 protein-coding Wdr19 WD repeat domain 19 INVOLVED IN cell morphogenesis (ortholog); cilium assembly (ortholog); digestive system development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); asphyxiating thoracic dystrophy 5 (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle A (ortholog); motile cilium (ortholog) NW_004955443 8053847 8122918 - 102028692 AGCD01038308;AGCD01038309;AGCD01038310;GBCQ01123355;XM_005391986 XP_005392043 MODEL 8719403 protein-coding Adtrp androgen dependent TFPI regulating protein ENCODES a protein that exhibits hydrolase activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955465 2721171 2823368 + 102017207 AGCD01050361;AGCD01050362;GBDK01307017;XM_005398822;XM_005398823;XM_013521868;XM_013521869;XM_013521870 XP_005398879;XP_005398880;XP_013377322;XP_013377323;XP_013377324 MODEL 8958546 protein-coding LOC102012404 olfactory receptor 6C74-like NW_004955458 2414762 2415699 - 102012404 AGCD01047233;XM_013520846 XP_013376300 MODEL 8962888 protein-coding Gdf15 growth differentiation factor 15 ENCODES a protein that exhibits cytokine activity (ortholog); hormone activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to chemical stress (ortholog); energy homeostasis (ortholog); GDF15-GFRAL signaling pathway (ortholog); ASSOCIATED WITH anemia (ortholog); Cachexia (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955524 3123513 3125642 - 102022734 AGCD01068859;GBDJ01263083;XM_005409571 XP_005409628 MODEL 9027635 ncrna LOC102005205 uncharacterized LOC102005205 NW_004955403 8964592 8970691 - 102005205 AGCD01001898;GBDF01159891;XR_001234497 MODEL 8834072 protein-coding Pdgfd platelet derived growth factor D INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Bone Metastasis (ortholog); Cardiac Allograft Vasculopathy (ortholog); FOUND IN extracellular space (ortholog) NW_004955412 6868995 7093353 - 102021538 AGCD01012683;AGCD01012684;AGCD01012685;AGCD01012686;AGCD01012687;GBCE01077565;XM_005377998;XM_005377999;XM_013511230;XM_013511231 XP_005378055;XP_005378056;XP_013366684;XP_013366685 MODEL 8947168 protein-coding Kif18a kinesin family member 18A ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); male meiotic nuclear division (ortholog); microtubule depolymerization (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); intercellular bridge (ortholog) NW_004955476 7058682 7117496 - 102017657 AGCD01055345;AGCD01055346;GBDF01124958;XM_005401755 XP_005401812 MODEL 8914520 ncrna LOC102003476 uncharacterized LOC102003476 NW_004955431 22858925 22862195 + 102003476 AGCD01030524;GBDJ01402645;XR_261494 MODEL 8868165 ncrna LOC102021414 uncharacterized LOC102021414 NW_004955405 9213975 9218444 + 102021414 AGCD01004765;GBCB01021521;XR_259365 MODEL 8917623 protein-coding Trpc4 transient receptor potential cation channel subfamily C member 4 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); lung cancer (ortholog); prostate cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); calcium channel complex (ortholog); cation channel complex (ortholog) NW_004955431 8283585 8479524 + 102020596 AGCD01030124;AGCD01030125;AGCD01030126;GBDJ01262104;XM_005387650;XM_005387651;XM_013515720 XP_005387707;XP_005387708;XP_013371174 MODEL 8754996 pseudo LOC102018025 inositol polyphosphate multikinase pseudogene NW_004955537 2739915 2745001 - 102018025 AGCD01070938 MODEL 39134174 misc_rna 7SK 7SK RNA 8779766 protein-coding Bag2 BAG cochaperone 2 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of protein ubiquitination (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Carpenter syndrome 1 (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic microtubule (ortholog) NW_004955502 2984233 2994457 - 102026767 AGCD01064307;AGCD01064308;GBCB01002701;XM_013505839 XP_013361293 MODEL 8774516 ncrna LOC102010003 uncharacterized LOC102010003 NW_004955447 16623757 16625250 + 102010003 AGCD01041095;GBDF01280990;XR_262438 MODEL 8894134 protein-coding Ttc39a tetratricopeptide repeat domain 39A ASSOCIATED WITH Liver Neoplasms (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN centrosome (ortholog) NW_004955464 7709669 7736484 + 102026088 AGCD01050068;GBDF01005076;GBDK01025507;XM_013521703 XP_013377157 MODEL 8813446 protein-coding Hmox1 heme oxygenase 1 ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); D-type glycerophospholipase activity (ortholog); enzyme binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to arsenic-containing substance (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme degradation pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute chest syndrome (ortholog); acute kidney failure (ortholog); FOUND IN caveola (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955405 43124447 43128873 + 102008591 AGCD01005599;GBDI01078698;XM_005374665 XP_005374722 MODEL 8840427 protein-coding LOC102024116 olfactory receptor 50-like NW_004955419 5579409 5580775 - 102024116 AGCD01019825;XM_005382924;XM_013513121 XP_005382981;XP_013368575 MODEL 39132343 snrna U6 U6 spliceosomal RNA 8772653 protein-coding Heatr3 HEAT repeat containing 3 INVOLVED IN erythrocyte maturation (ortholog); protein import into nucleus (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 1 (ortholog); Diamond-Blackfan Anemia 21 (ortholog) NW_004955433 8183701 8224117 + 102014597 AGCD01031584;AGCD01031585;AGCD01031586;AGCD01031587;GBBH01036719;XM_005388264 XP_005388321 MODEL 8970289 protein-coding Thtpa thiamine triphosphatase ENCODES a protein that exhibits magnesium ion binding (ortholog); thiamine triphosphate phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine diphosphate metabolic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; FOUND IN cytosol (ortholog) NW_004955409 36803721 36808094 - 102016453 AGCD01010481;AGCD01010482;GBBH01188134;XM_005377061;XM_013510425;XM_013510426;XM_013510427 XP_005377118;XP_013365879;XP_013365880;XP_013365881 MODEL 8717240 protein-coding Iqank1 IQ motif and ankyrin repeat containing 1 NW_004955454 2427621 2461556 + 102011174 AGCD01045020;AGCD01045021;GBCE01142105;XM_005395804;XM_005395805;XM_005395806;XM_013520055;XM_013520056;XM_013520057 XP_005395861;XP_005395862;XP_005395863;XP_013375509;XP_013375510;XP_013375511 MODEL 8983844 protein-coding Dnaja4 DnaJ heat shock protein family (Hsp40) member A4 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of endothelial cell migration (ortholog); negative regulation of inclusion body assembly (ortholog); positive regulation of gene expression (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955450 757485 771033 + 102008481 AGCD01042344;GBDF01000161;XM_005393442 XP_005393499 MODEL 39131301 protein-coding FAM240B family with sequence similarity 240 member B 39134485 misc_rna 7SK 7SK RNA 9002438 protein-coding Gdf2 growth differentiation factor 2 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); angiogenesis (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); hepatocellular carcinoma (ortholog); hereditary hemorrhagic telangiectasia (ortholog); FOUND IN extracellular space (ortholog) NW_004955556 2204841 2210335 + 102013975 AGCD01073208;XM_005412612 XP_005412669 MODEL 8891255 protein-coding Apoa2 apolipoprotein A2 ENCODES a protein that exhibits apolipoprotein receptor binding (ortholog); cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to lipoprotein particle stimulus (ortholog); cholesterol efflux (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH APOLIPOPROTEIN A-II DEFICIENCY (ortholog); coronary artery disease (ortholog); Diabetic Nephropathies (ortholog); FOUND IN chylomicron (ortholog); extracellular space (ortholog); high-density lipoprotein particle (ortholog) NW_004955468 12977956 12979282 - 102007646 AGCD01052194;GBDF01236482;XM_005400270 XP_005400327 MODEL 8872756 protein-coding LOC102005206 PRAME family member 20-like NW_004955615 197175 199688 + 102005206 AGCD01077251;XM_005414983 XP_005415040 MODEL 8831464 protein-coding Fig4 FIG4 phosphoinositide 5-phosphatase ENCODES a protein that exhibits phosphatidylinositol bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); phosphatidylinositol-4-phosphate phosphatase activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process (ortholog); locomotory behavior (ortholog); myelin assembly (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 11 (ortholog); FOUND IN endosome membrane (ortholog); recycling endosome (ortholog) NW_004955411 3135752 3217891 - 102015087 AGCD01011539;AGCD01011540;AGCD01011541;AGCD01011542;GBDF01046654;GBDF01121439;XM_005377617 XP_005377674 MODEL 8714236 protein-coding LOC102019614 olfactory receptor 10T2-like NW_004955495 8054019 8062946 - 102019614 AGCD01062177;XM_005406177 XP_005406234 MODEL 8934244 pseudo LOC102019925 60S ribosomal protein L15-like NW_004955494 2720745 2723079 + 102019925 AGCD01061448 MODEL 39132351 rrna 5S_rRNA 5S ribosomal RNA 8777516 protein-coding Bin1 bridging integrator 1 ENCODES a protein that exhibits actin filament binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); GTPase binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); lipid tube assembly (ortholog); muscle cell differentiation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autosomal dominant nonsyndromic deafness 22 (ortholog); autosomal recessive centronuclear myopathy (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) NW_004955459 3376149 3423157 + 102006639 AGCD01048015;GBDI01010869;XM_005397618;XM_005397619;XM_005397620;XM_005397621;XM_005397622;XM_005397623;XM_005397624;XM_005397625;XM_005397626;XM_005397627;XM_005397628;XM_005397629;XM_005397630;XM_005397631;XM_005397632;XM_005397633;XM_005397634;XM_013521077 XP_005397675;XP_005397676;XP_005397677;XP_005397678;XP_005397679;XP_005397680;XP_005397681;XP_005397682;XP_005397683;XP_005397684;XP_005397685;XP_005397686;XP_005397687;XP_005397688;XP_005397689;XP_005397690;XP_005397691;XP_013376531 MODEL 39133311 snrna U4 U4 spliceosomal RNA 8987116 protein-coding Ch25h cholesterol 25-hydroxylase ENCODES a protein that exhibits cholesterol 25-hydroxylase activity (ortholog); steroid hydroxylase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); cholesterol metabolic process (ortholog); negative regulation of cholesterol metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway NW_004955425 3763302 3764432 + 102018413 AGCD01025297;GBBH01026526;XM_005385856 XP_005385913 MODEL 8790161 ncrna LOC102022416 uncharacterized LOC102022416 NW_004955431 15481204 15487817 + 102022416 AGCD01030361;GBDI01229445;XR_261478 MODEL 9055743 protein-coding Adam19 ADAM metallopeptidase domain 19 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metalloendopeptidase activity involved in amyloid precursor protein catabolic process (ortholog); SH3 domain binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); heart development (ortholog); membrane protein ectodomain proteolysis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH congenital heart disease (ortholog); lung adenocarcinoma (ortholog); squamous cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); nucleus (ortholog) NW_004955408 11651298 11746391 - 102016024 AGCD01008314;AGCD01008315;AGCD01008316;AGCD01008317;GBDJ01135894;XM_005376236;XM_005376238;XM_013508800 XP_005376293;XP_005376295;XP_013364254 MODEL 8987458 protein-coding LOC102005965 cytochrome b-c1 complex subunit 1, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); response to activity (ortholog); response to alkaloid (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); hypertrophic cardiomyopathy (ortholog); PARKINSONISM WITH POLYNEUROPATHY (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955532 685315 691286 - 102005965 AGCD01070144;GBDF01007354;XM_013507657 XP_013363111 MODEL 8808180 pseudo LOC102012409 5-azacytidine-induced protein 2 pseudogene NW_004955409 26519198 26520981 - 102012409 AGCD01010189 MODEL 9043453 protein-coding Wdr20 WD repeat domain 20 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); papillary thyroid carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955538 1520336 1590824 + 102026907 AGCD01071069;AGCD01071070;AGCD01071071;AGCD01071072;AGCD01071073;AGCD01071074;GBDF01083282;XM_005410738;XM_005410739;XM_005410740;XM_005410743;XM_005410746;XM_005410747;XM_005410748;XM_013507829;XM_013507830;XM_013507831 XP_005410795;XP_005410796;XP_005410797;XP_005410800;XP_005410803;XP_005410804;XP_005410805;XP_013363283;XP_013363284;XP_013363285 MODEL 8886087 protein-coding Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit ENCODES a protein that exhibits DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); error-prone translesion synthesis (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); genetic disease (ortholog); FOUND IN nucleolus (ortholog); site of DNA damage (ortholog); zeta DNA polymerase complex (ortholog) NW_004955411 36068248 36246607 - 102029601 AGCD01012464;AGCD01012465;AGCD01012466;AGCD01012467;AGCD01012468;AGCD01012469;GBDK01092750;XM_005377901;XM_005377902;XM_005377904;XM_005377905;XM_013510833;XM_013510834 XP_005377958;XP_005377959;XP_005377961;XP_005377962;XP_013366287;XP_013366288 MODEL 8775434 protein-coding Set SET nuclear proto-oncogene INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 58 (ortholog); Developmental Disabilities (ortholog); dysgerminoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955570 1104447 1117682 + 102025059 AGCD01074788;AGCD01074789;AGCD01074790;GBCC01015512;GBDF01047525;XM_013509410 XP_013364864 MODEL 8840746 protein-coding Plcz1 phospholipase C zeta 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN calcium ion transport (ortholog); egg activation (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH spermatogenic failure 17 (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955413 14791750 14846327 - 102011640 AGCD01014051;AGCD01014052;AGCD01014053;GBDF01083196;XM_005379040;XM_013511282;XR_001232940;XR_260080 XP_005379097;XP_013366736 MODEL 8776911 pseudo LOC102003478 pre-mRNA-splicing regulator WTAP-like NW_004955514 116863 117609 + 102003478 AGCD01066997 MODEL 8868029 ncrna LOC102017268 uncharacterized LOC102017268 NW_004955524 3261313 3263158 + 102017268 AGCD01068874;GBDI01279590;XR_001231949;XR_001231950 MODEL 8971973 protein-coding Fam241a family with sequence similarity 241 member A FOUND IN Golgi apparatus (ortholog) NW_004955457 14550478 14553757 - 102021523 AGCD01047075;GBCQ01099058;XM_005397105 XP_005397162 MODEL 39131688 rrna 5S_rRNA 5S ribosomal RNA 9033222 pseudo LOC102015029 GMP reductase 1 pseudogene NW_004955427 9113740 9114285 + 102015029 AGCD01027093 MODEL 8716527 protein-coding Figla folliculogenesis specific bHLH transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955424 14393566 14402971 + 102003889 AGCD01024654;GBDF01007679;XM_013514581;XM_013514582 XP_013370035;XP_013370036 MODEL 8826626 protein-coding LOC102010789 histone H1.0 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN chromosome condensation (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nuclear body (ortholog) NW_004955413 24182547 24184588 + 102010789 AGCD01014355;GBBH01030914;XM_005379227 XP_005379284 MODEL 39133910 misc_rna 7SK 7SK RNA 9051785 protein-coding Ascl1 achaete-scute family bHLH transcription factor 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal chromaffin cell differentiation (ortholog); carotid body glomus cell differentiation (ortholog); cell differentiation (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Hyperplasia (ortholog); intellectual disability (ortholog); FOUND IN neuronal cell body (ortholog); nucleus (ortholog) NW_004955405 37941243 37943641 + 102006308 AGCD01005463;GBDI01387257;XM_005374573 XP_005374630 MODEL 8712650 protein-coding Hmox2 heme oxygenase 2 ENCODES a protein that exhibits heme oxygenase (decyclizing) activity (ortholog); INVOLVED IN response to hypoxia (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Cerebral Hemorrhage (ortholog); migraine with aura (ortholog); FOUND IN plasma membrane (ortholog) NW_004955442 12913983 12947412 - 102010418 AGCD01037748;AGCD01037749;AGCD01037750;GBBH01007410;XM_005391291;XM_013517724 XP_005391348;XP_013373178 MODEL 9006941 protein-coding Trip10 thyroid hormone receptor interactor 10 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Huntington's disease (ortholog) NW_004955495 2770449 2780650 - 102005157 AGCD01061799;GBCE01028494;XM_005405695;XM_005405697 XP_005405752;XP_005405754 MODEL 39133002 snrna U1 U1 spliceosomal RNA 8902761 protein-coding Ptdss1 phosphatidylserine synthase 1 ENCODES a protein that exhibits L-serine-phosphatidylcholine phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); Lenz-Majewski hyperostotic dwarfism (ortholog); microcephaly (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955417 12268908 12327127 + 102005804 AGCD01018160;AGCD01018161;AGCD01018162;GBDF01049061;XM_005381833 XP_005381890 MODEL 39133312 snrna U4 U4 spliceosomal RNA 9056945 protein-coding Atp6ap1l ATPase H+ transporting accessory protein 1 like ASSOCIATED WITH Breast Neoplasms (ortholog) NW_004955418 28077388 28106183 - 102005143 AGCD01019427;AGCD01019428;GBCQ01152832;GBCQ01152833;XM_013513053;XM_013513055;XM_013513056;XM_013513057;XM_013513058;XM_013513059 XP_013368507;XP_013368509;XP_013368510;XP_013368511;XP_013368512;XP_013368513 MODEL 10255402 protein-coding LOC106150078 translation initiation factor IF-2-like NW_004955464 11120250 11135167 + 106150078 AGCD01050136;GBDF01263806;GBDJ01115032;XM_013521578 XP_013377032 MODEL 8997181 ncrna LOC102007019 uncharacterized LOC102007019 NW_004955420 21387304 21399329 - 102007019 AGCD01021135;GBDK01343956;XR_260734 MODEL 9003520 protein-coding Casp2 caspase 2 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to mechanical stimulus (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Autosomal Recessive Intellectual Developmental Disorder 80 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955494 353572 369207 - 102027080 AGCD01061376;GBCE01142312;XM_005405371;XM_013505017;XM_013505018 XP_005405428;XP_013360471;XP_013360472 MODEL 8756901 protein-coding Tpbg trophoblast glycoprotein INVOLVED IN cell chemotaxis (ortholog); dendrite arborization (ortholog); mesenchymal cell migration (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955411 10203144 10206711 + 102015182 AGCD01011775;AGCD01011776;GBBH01076595;XM_013510911 XP_013366365 MODEL 8875015 ncrna LOC102021415 uncharacterized LOC102021415 NW_004955405 29322874 29335910 + 102021415 AGCD01005251;GBDF01017084;XR_259408 MODEL 8869505 protein-coding Pdgfra platelet derived growth factor receptor alpha ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); phospholipase C activator activity (ortholog); platelet-derived growth factor alpha-receptor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); anatomical structure morphogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); Brain Injuries (ortholog); brain stem glioma (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cilium (ortholog) NW_004955447 16570652 16613410 - 102009436 AGCD01041092;AGCD01041093;AGCD01041094;GBDJ01131981;XM_005392898;XM_005392899 XP_005392955;XP_005392956 MODEL 8753248 protein-coding Thumpd1 THUMP domain 1 NAT10 acetyltransferase adaptor ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH SPEECH DELAY AND VARIABLE OCULAR ANOMALIES (ortholog) NW_004955493 32326 40283 - 102027865 AGCD01060835;GBCE01097709;XM_005405026 XP_005405083 MODEL 8731138 protein-coding Kif18b kinesin family member 18B ENCODES a protein that exhibits cytoskeletal motor activity (ortholog); kinesin binding (ortholog); INVOLVED IN microtubule depolymerization (ortholog); mitotic cell cycle (ortholog); regulation of cell division (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN astral microtubule (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 17707150 17722376 - 102022247 AGCD01043767;AGCD01043768;GBDF01192813;XM_005394558 XP_005394615 MODEL 39134486 misc_rna 7SK 7SK RNA 8911479 protein-coding Aldh7a1 aldehyde dehydrogenase 7 family member A1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); betaine-aldehyde dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); energy homeostasis (ortholog); Golgi to endosome transport (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; choline metabolic pathway; glutaric aciduria type I pathway; ASSOCIATED WITH benign neonatal seizures (ortholog); bone disease (ortholog); coloboma (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrion (ortholog) NW_004955521 4365075 4396105 - 102018524 AGCD01068261;GBDF01084687;XM_005409326 XP_005409383 MODEL 9025194 protein-coding Iqcb1 IQ motif containing B1 ENCODES a protein that exhibits BBSome binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN cilium assembly (ortholog); cytosolic ciliogenesis (ortholog); maintenance of animal organ identity (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); cone-rod dystrophy 2 (ortholog); fundus dystrophy (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); photoreceptor connecting cilium (ortholog) NW_004955427 21120012 21171838 - 102007450 AGCD01027432;GBDF01126511;XM_013515101;XM_013515102;XM_013515103 XP_013370555;XP_013370556;XP_013370557 MODEL 9036271 protein-coding Gdf3 growth differentiation factor 3 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN endoderm development (ortholog); eye development (ortholog); formation of anatomical boundary (ortholog); ASSOCIATED WITH Camptocormia (ortholog); congenital heart disease (ortholog); Edema (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 6493734 6516315 - 102018279 AGCD01013745;AGCD01013746;AGCD01013747;AGCD01013748;GBDF01173445;XM_013511291 XP_013366745 MODEL 39134175 misc_rna 7SK 7SK RNA 8844299 protein-coding Gpank1 G-patch domain and ankyrin repeats 1 NW_004955437 207563 211374 - 102019526 AGCD01034110;AGCD01034111;GBCQ01150662;XM_005389351;XM_005389352 XP_005389408;XP_005389409 MODEL 9051705 protein-coding Dyrk4 dual specificity tyrosine phosphorylation regulated kinase 4 NW_004955413 2359480 2410395 + 102003640 AGCD01013544;AGCD01013545;XM_005378732;XM_005378733;XM_013511555;XM_013511556;XM_013511557;XM_013511558;XM_013511559;XM_013511560;XM_013511561;XM_013511562;XM_013511563;XM_013511565;XM_013511566;XM_013511567 XP_005378789;XP_005378790;XP_013367009;XP_013367010;XP_013367011;XP_013367012;XP_013367013;XP_013367014;XP_013367015;XP_013367016;XP_013367017;XP_013367019;XP_013367020;XP_013367021 MODEL 8873810 protein-coding Ttc39b tetratricopeptide repeat domain 39B INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of cholesterol storage (ortholog); regulation of cholesterol efflux (ortholog); ASSOCIATED WITH atherosclerosis (ortholog) NW_004955434 18063520 18150858 - 102018431 AGCD01032550;AGCD01032551;GBCE01130029;GBCQ01009238;XM_005388704 XP_005388761 MODEL 9058790 protein-coding LOC102019616 melanoma-associated antigen 10-like NW_004955498 2708546 2709343 - 102019616 AGCD01062827;XM_005406472 XP_005406529 MODEL 8977918 pseudo LOC102019926 heterogeneous nuclear ribonucleoprotein A1-like NW_004955423 1559337 1559990 - 102019926 AGCD01023443 MODEL 39132358 rrna 5S_rRNA 5S ribosomal RNA 9015858 protein-coding Aebp1 AE binding protein 1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); collagen binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of collagen fibril organization (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); Ehlers-Danlos syndrome classic type 2 (ortholog) NW_004955456 7860191 7868526 - 102022163 AGCD01046435;GBBH01031727;XM_005396673 XP_005396730 MODEL 9015201 ncrna LOC102015034 uncharacterized LOC102015034 NW_004955429 21345281 21346765 + 102015034 AGCD01029000;GBDF01210733;XR_261373 MODEL 8941975 protein-coding Heatr4 HEAT repeat containing 4 ASSOCIATED WITH COVID-19 (ortholog) NW_004955523 1868954 1928154 + 102026787 AGCD01068549;AGCD01068550;GBDF01155719;XM_005409419;XM_005409420;XM_005409421;XM_005409422;XM_005409423;XM_013507124 XP_005409476;XP_005409477;XP_005409478;XP_005409479;XP_005409480;XP_013362578 MODEL 8789974 protein-coding Trpc4ap transient receptor potential cation channel subfamily C member 4 associated protein ENCODES a protein that exhibits phosphatase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN hair follicle maturation (ortholog); protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog) NW_004955422 26301937 26383464 + 102016719 AGCD01023284;AGCD01023285;AGCD01023286;AGCD01023287;AGCD01023288;GBDF01005507;XM_005384808;XM_005384809 XP_005384865;XP_005384866 MODEL 8823434 ncrna LOC102018027 uncharacterized LOC102018027 NW_004955437 7912514 7931491 - 102018027 AGCD01034474;AGCD01034475;GBDI01369509;XR_001235114;XR_001235115;XR_001235116 MODEL 8790057 protein-coding Wdr24 WD repeat domain 24 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of protein kinase activity (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN GATOR2 complex (ortholog); lysosomal membrane (ortholog) NW_004955442 16513074 16519296 + 102019336 AGCD01037901;GBDJ01084560;XM_005391617;XM_005391618 XP_005391674;XP_005391675 MODEL 10080215 protein-coding LOC106147100 tastin-like NW_004955518 200978 201787 + 106147100 AGCD01067721;GBDJ01388183;XM_013506968 XP_013362422 MODEL 8931988 protein-coding Bag3 BAG cochaperone 3 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); protein-containing complex binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to heat (ortholog); cellular response to mechanical stimulus (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); atrial fibrillation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955551 446322 468329 + 102011814 AGCD01072656;AGCD01072657;GBBH01114721;XM_005412164;XM_013508589;XM_013508590 XP_005412221;XP_013364043;XP_013364044 MODEL 9004183 pseudo LOC102024122 casein kinase I isoform alpha pseudogene NW_004955421 547617 566169 + 102024122 AGCD01021566 MODEL 39132344 snrna U6 U6 spliceosomal RNA 8931245 protein-coding Bin2 bridging integrator 2 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); phagocytosis, engulfment (ortholog); plasma membrane tubulation (ortholog); FOUND IN phagocytic cup (ortholog); plasma membrane (ortholog); podosome (ortholog) NW_004955547 1774330 1798031 - 102016523 AGCD01072246;GBDF01006942;GBDK01146360;XM_013508468 XP_013363922 MODEL 8837334 protein-coding Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog); Notch binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of Notch signaling pathway (ortholog); negative regulation of protein processing (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosol (ortholog); trans-Golgi network (ortholog) NW_004955416 7828917 7831368 + 102003019 AGCD01017014;GBDK01117054;XM_005381272 XP_005381329 MODEL 8763435 protein-coding Hmx1 H6 family homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog) NW_004955514 2441234 2442478 + 102005494 AGCD01067081;GBDF01179009;XM_005408766 XP_005408823 MODEL 39133313 snrna U4 U4 spliceosomal RNA 8901342 protein-coding Adam2 ADAM metallopeptidase domain 2 INVOLVED IN adult behavior (ortholog); cell adhesion (ortholog); gene expression (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Kidney Reperfusion Injury (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); protein-containing complex (ortholog) NW_004955403 50046262 50115004 + 102005989 AGCD01002955;AGCD01002956;AGCD01002957;AGCD01002958;AGCD01002959;GBDF01007405;XM_005373747;XM_013514227 XP_005373804;XP_013369681 MODEL 10260273 ncrna LOC106150079 uncharacterized LOC106150079 NW_004955464 5775925 5777879 + 106150079 AGCD01050013;GBDI01194966;XR_001236670 MODEL 8785852 protein-coding Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); forebrain development (ortholog); negative regulation of inclusion body assembly (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955415 33098503 33102125 - 102017564 AGCD01016751;GBCB01021066;XM_005381107 XP_005381164 MODEL 9007772 protein-coding Rex1bd required for excision 1-B domain containing NW_004955524 3003820 3005677 - 102009210 AGCD01068848;GBCE01001434;GBDJ01073176;XM_013507290 XP_013362744 MODEL 8907434 protein-coding Setbp1 SET binding protein 1 ASSOCIATED WITH atrial heart septal defect (ortholog); atypical chronic myeloid leukemia, BCR-ABL1 negative (ortholog); autosomal dominant intellectual developmental disorder 29 (ortholog); FOUND IN nuclear body (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955402 30380346 30738869 + 102026697 AGCD01000770;AGCD01000771;AGCD01000772;AGCD01000773;AGCD01000774;AGCD01000775;AGCD01000776;AGCD01000777;AGCD01000778;GBCE01116826;XM_005373166 XP_005373223 MODEL 9032182 protein-coding LOC102005207 tetratricopeptide repeat protein 30B NW_004955403 19185628 19196278 + 102005207 AGCD01002119;GBCE01133727;XM_005373399 XP_005373456 MODEL 8950980 pseudo LOC102021423 acid sphingomyelinase-like phosphodiesterase 3a pseudogene NW_004955408 15529175 15530254 - 102021423 AGCD01008420 MODEL 8755676 protein-coding Tpbgl trophoblast glycoprotein like NW_004955414 16580847 16583930 - 102015400 AGCD01015219;AGCD01015220;GBCE01168697;GBDF01122676;XM_013511705 XP_013367159 MODEL 8732730 pseudo LOC102003479 tumor susceptibility gene 101 protein pseudogene NW_004955515 383004 383850 - 102003479 AGCD01067198;XR_264530 MODEL 8824881 protein-coding Thumpd2 THUMP domain 2 tRNA and snRNA guanosine methyltransferase ENCODES a protein that exhibits U6 snRNA (guanine-N(2))-methyltransferase activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nucleus (ortholog); tRNA methyltransferase complex (ortholog) NW_004955441 7329468 7369957 - 102016851 AGCD01036958;AGCD01036959;AGCD01036960;AGCD01036961;GBDJ01125332;XM_005390906;XM_005390907;XM_013517626;XM_013517627 XP_005390963;XP_005390964;XP_013373080;XP_013373081 MODEL 39131689 rrna 5S_rRNA 5S ribosomal RNA 9026766 protein-coding Trpc5 transient receptor potential cation channel subfamily C member 5 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN negative regulation of dendrite morphogenesis (ortholog); neuron apoptotic process (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Albuminuria (ortholog); dilated cardiomyopathy 1H (ortholog); hypertension (ortholog); FOUND IN calcium channel complex (ortholog); dendrite (ortholog); growth cone (ortholog) NW_004955490 3777756 4057275 + 102029978 AGCD01060174;AGCD01060175;AGCD01060176;AGCD01060177;AGCD01060178;AGCD01060179;AGCD01060180;XM_005404633;XM_013504508 XP_005404690;XP_013359962 MODEL 10337365 ncrna LOC106147101 uncharacterized LOC106147101 NW_004955518 3109911 3113667 - 106147101 AGCD01067793;GBDF01035276;XR_001231853 MODEL 8952890 protein-coding LOC102017269 vomeronasal type-2 receptor 116-like NW_004955524 2310917 2334613 - 102017269 AGCD01068810;GBDF01162761;XM_005409650 XP_005409707 MODEL 8722030 protein-coding Fam241b family with sequence similarity 241 member B NW_004955437 21526944 21529611 - 102020051 AGCD01034908;GBDI01353327;XM_005390080;XM_013516711 XP_005390137;XP_013372165 MODEL 39133911 misc_rna 7SK 7SK RNA 8724154 ncrna LOC102022417 uncharacterized LOC102022417 NW_004955432 705758 726019 - 102022417 AGCD01030574;GBCE01049655;XR_261497 MODEL 9036934 pseudo LOC102012410 cullin-4B pseudogene NW_004955462 1327574 1331025 - 102012410 AGCD01049112 MODEL 39133005 snrna U1 U1 spliceosomal RNA 39132364 rrna 5S_rRNA 5S ribosomal RNA 9057802 protein-coding Ttc39c tetratricopeptide repeat domain 39C NW_004955402 12408853 12503273 + 102007385 AGCD01000390;AGCD01000391;GBDI01295181;GBDJ01387468;XM_005372710 XP_005372767 MODEL 8743490 ncrna LOC102007021 uncharacterized LOC102007021 NW_004955420 24298864 24300985 - 102007021 AGCD01021290;GBCQ01057710;XR_260746;XR_260747;XR_260748 MODEL 9026136 pseudo LOC102010005 39S ribosomal protein L47, mitochondrial pseudogene NW_004955449 1853430 1854383 + 102010005 AGCD01041814;XM_005393196 MODEL 8713851 protein-coding Atp6ap2 ATPase H+ transporting accessory protein 2 INVOLVED IN angiotensin maturation (ortholog); central nervous system maturation (ortholog); eye pigmentation (ortholog); PARTICIPATES IN renin-angiotensin cascade pathway; ASSOCIATED WITH congenital disorder of glycosylation type IIr (ortholog); Craniofacial Abnormalities (ortholog); Fibrosis (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955565 2006154 2029921 - 102005522 AGCD01074337;AGCD01074338;AGCD01074339;GBCQ01011649;XM_005413271 XP_005413328 MODEL 8804558 protein-coding Apoa4 apolipoprotein A4 ENCODES a protein that exhibits antioxidant activity (ortholog); cholesterol transfer activity (ortholog); copper ion binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH anemia (ortholog); atherosclerosis (ortholog); autosomal dominant tubulointerstitial kidney disease 6 (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular space (ortholog) NW_004955412 18158095 18160636 - 102022179 AGCD01012927;GBCQ01000938;XM_005378188 XP_005378245 MODEL 9026791 protein-coding Casp3 caspase 3 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN response to auditory stimulus; anterior neural tube closure (ortholog); apoptotic process (ortholog); PARTICIPATES IN apoptotic cell death pathway; extrinsic apoptotic pathway; FasL mediated signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); death-inducing signaling complex (ortholog) NW_004955403 24315712 24326271 + 102005331 AGCD01002272;GBBH01076760;GBDF01076734;XM_013513062 XP_013368516 MODEL 8948004 protein-coding Kif19 kinesin family member 19 ENCODES a protein that exhibits plus-end-directed microtubule motor activity (ortholog); INVOLVED IN axonemal microtubule depolymerization (ortholog); plus-end specific microtubule depolymerization (ortholog); ASSOCIATED WITH Hydrops Fetalis (ortholog); FOUND IN cilium (ortholog) NW_004955553 1219462 1247161 + 102007281 AGCD01072873;GBDF01178770;XM_005412230;XM_013508634;XM_013508635 XP_005412287;XP_013364088;XP_013364089 MODEL 39134487 misc_rna 7SK 7SK RNA 8922304 protein-coding LOC102018034 uncharacterized LOC102018034 NW_004955555 1393477 1423035 + 102018034 AGCD01073077;AGCD01073078;AGCD01073079;AGCD01073080;GBDJ01124619;GBDK01349306;XM_013508755;XM_013508756;XM_013508757 XP_013364209;XP_013364210;XP_013364211 MODEL 39134176 misc_rna 7SK 7SK RNA 8868912 protein-coding Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN glycerol-3-phosphate metabolic process (ortholog); phosphatidic acid biosynthetic process (ortholog); piRNA processing (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955470 3633076 3643635 - 102013921 AGCD01052705;GBDF01053520;XM_013522823 XP_013378277 MODEL 8889595 protein-coding Aldh8a1 aldehyde dehydrogenase 8 family member A1 ENCODES a protein that exhibits retinal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); retinal metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH cholestasis (ortholog) NW_004955439 1773884 1794325 + 102004121 AGCD01035627;GBCQ01041842;XM_005390500;XM_013517432 XP_005390557;XP_013372886 MODEL 8940184 ncrna LOC102010796 uncharacterized LOC102010796 NW_004955473 4935115 4942810 - 102010796 AGCD01053962;GBDK01418846;XR_001237109;XR_263580 MODEL 8708668 pseudo LOC102019617 serine-rich coiled-coil domain-containing protein 2 pseudogene NW_004955424 3832086 3840893 + 102019617 AGCD01024331 MODEL 8846315 pseudo LOC102005969 protein FAM204A pseudogene NW_004955438 15499120 15499834 + 102005969 AGCD01035370 MODEL 8987193 protein-coding Bag4 BAG cochaperone 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); negative regulation of mRNA modification (ortholog); PARTICIPATES IN ceramide signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955463 13788852 13824135 + 102021535 AGCD01049886;AGCD01049887;AGCD01049888;AGCD01049889;AGCD01049890;GBDF01161731;XM_005398437 XP_005398494 MODEL 8845227 protein-coding Trip11 thyroid hormone receptor interactor 11 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); chondrocyte differentiation involved in endochondral bone morphogenesis (ortholog); ASSOCIATED WITH achondrogenesis (ortholog); achondrogenesis type IA (ortholog); autism spectrum disorder (ortholog); FOUND IN acrosomal membrane (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955438 14327400 14394022 - 102022016 AGCD01035343;AGCD01035344;AGCD01035345;GBDK01231119;XM_013517219 XP_013372673 MODEL 8904511 protein-coding Ascl2 achaete-scute family bHLH transcription factor 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); chorionic trophoblast cell development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 14051140 14053521 - 102007908 AGCD01022847;GBBH01114854;XM_005384200;XM_013514320 XP_005384257;XP_013369774 MODEL 8960217 protein-coding Ptdss2 phosphatidylserine synthase 2 ENCODES a protein that exhibits CDP-diacylglycerol-serine O-phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955476 11554962 11585574 - 102022914 AGCD01055466;GBDJ01080587;XM_005401863;XM_013502927;XM_013502928;XM_013502929;XM_013502930;XM_013502931;XM_013502932 XP_005401920;XP_013358381;XP_013358382;XP_013358383;XP_013358384;XP_013358385;XP_013358386 MODEL 8763655 protein-coding Aebp2 AE binding protein 2 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); Waardenburg syndrome (ortholog); FOUND IN ESC/E(Z) complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 15514247 15561233 + 102012943 AGCD01014077;GBCQ01155053;GBDF01196223;XM_005379044 XP_005379101 MODEL 8749442 protein-coding Thumpd3 THUMP domain 3 tRNA guanosine methyltransferase ENCODES a protein that exhibits tRNA (guanine(6)-N2)-methyltransferase activity (ortholog); tRNA (guanine(7)-N2)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955561 933168 956457 + 102028693 AGCD01073827;GBDI01041484;XM_005413004;XM_005413005 XP_005413061;XP_005413062 MODEL 9059364 ncrna LOC102015035 uncharacterized LOC102015035 NW_004955511 2336653 2341166 + 102015035 AGCD01066398;GBDI01289680;XR_001231670;XR_001231671 MODEL 39133316 snrna U4 U4 spliceosomal RNA 8921146 protein-coding Pld1 phospholipase D1 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); defense response to Gram-positive bacterium (ortholog); phosphatidic acid biosynthetic process (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); developmental cardiac valvular defect (ortholog); Experimental Seizures (ortholog); FOUND IN apical plasma membrane (ortholog); cholinergic synapse (ortholog); endocytic vesicle (ortholog) NW_004955420 1697716 1892741 - 102026748 AGCD01020576;AGCD01020577;AGCD01020578;AGCD01020579;AGCD01020580;AGCD01020581;AGCD01020582;GBDI01326771;XM_005382998;XM_005382999;XM_005383000;XM_005383002;XM_013513558;XM_013513559;XM_013513560;XM_013513561 XP_005383055;XP_005383056;XP_005383057;XP_005383059;XP_013369012;XP_013369013;XP_013369014;XP_013369015 MODEL 9044640 protein-coding Iqcc IQ motif containing C ASSOCIATED WITH polycystic ovary syndrome (ortholog) NW_004955452 10574034 10576898 + 102018253 AGCD01044280;GBCQ01124429;XM_005395053 XP_005395110 MODEL 8966527 pseudo LOC102010007 inaD-like protein pseudogene NW_004955402 42875359 42877029 - 102010007 AGCD01001050 MODEL 10384272 ncrna LOC106150080 uncharacterized LOC106150080 NW_004955464 5127299 5128697 + 106150080 AGCD01049999;GBCE01138596;XR_001236672 MODEL 9010583 ncrna LOC102021425 uncharacterized LOC102021425 NW_004955409 23740604 23772120 - 102021425 AGCD01010072;AGCD01010073;GBDK01264000;XR_259789 MODEL 8734059 pseudo LOC102005209 peptidyl-prolyl cis-trans isomerase D pseudogene NW_004955762 7725 8459 + 102005209 AGCD01078304 MODEL 8897338 protein-coding Wdr25 WD repeat domain 25 ASSOCIATED WITH long QT syndrome (ortholog) NW_004955438 21445502 21570271 + 102018335 AGCD01035544;AGCD01035545;AGCD01035546;AGCD01035547;GBBH01071352;GBDF01122161;XM_005390456 XP_005390513 MODEL 8831810 protein-coding Adam22 ADAM metallopeptidase domain 22 INVOLVED IN adult locomotory behavior (ortholog); gliogenesis (ortholog); myelination in peripheral nervous system (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 61 (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); glutamatergic synapse (ortholog) NW_004955432 5306018 5536282 + 102026782 AGCD01030778;AGCD01030779;AGCD01030780;AGCD01030781;AGCD01030782;AGCD01030783;AGCD01030784;AGCD01030785;AGCD01030786;GBBH01146350;GBCE01145833;XM_013516010;XM_013516011;XM_013516012;XM_013516013;XM_013516014 XP_013371464;XP_013371465;XP_013371466;XP_013371467;XP_013371468 MODEL 9038442 protein-coding Tpcn1 two pore segment channel 1 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity (ortholog); ligand-gated sodium channel activity (ortholog); INVOLVED IN endocytosis involved in viral entry into host cell (ortholog); positive regulation of autophagy (ortholog); sodium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH oligospermia (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome (ortholog); endosome membrane (ortholog) NW_004955482 9538572 9594739 + 102015201 AGCD01057574;GBBH01119361;XM_005403217;XM_005403218;XM_005403219;XM_005403220;XM_005403221;XM_005403222 XP_005403274;XP_005403275;XP_005403276;XP_005403277;XP_005403278;XP_005403279 MODEL 39131690 rrna 5S_rRNA 5S ribosomal RNA 8952951 pseudo LOC102019927 olfactory receptor 7A10-like NW_004955495 8071501 8074360 + 102019927 AGCD01062178 MODEL 8776073 protein-coding Trpc5os TRPC5 opposite strand NW_004955490 3952565 3981690 - 102029636 AGCD01060178;AGCD01060179;GBDF01209797;XM_005404632;XM_013504509 XP_005404689;XP_013359963 MODEL 8731531 protein-coding Bin3 bridging integrator 3 INVOLVED IN intracellular protein localization (ortholog); myoblast migration involved in skeletal muscle regeneration (ortholog); regulation of lamellipodium assembly (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955403 46042885 46085029 - 102013997 AGCD01002849;GBDF01085029;XM_005373686 XP_005373743 MODEL 9032121 protein-coding Chac2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog) NW_004955441 19502389 19509736 + 102029331 AGCD01037348;GBCB01043730;XM_005391020 XP_005391077 MODEL 8898374 protein-coding Pdgfrb platelet derived growth factor receptor beta ENCODES a protein that exhibits enzyme binding (ortholog); GTPase activator activity (ortholog); kinase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); aorta morphogenesis (ortholog); blood vessel development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); basal ganglia calcification (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955415 4365848 4403317 + 102018718 AGCD01015969;GBDJ01088291;XM_005380586;XM_013512215;XM_013512216 XP_005380643;XP_013367669;XP_013367670 MODEL 8716753 ncrna LOC102012411 uncharacterized LOC102012411 NW_004955411 2942448 2946613 + 102012411 AGCD01011526;GBCQ01140642;XR_259913 MODEL 39132370 rrna 5S_rRNA 5S ribosomal RNA 8950751 protein-coding Heatr5a HEAT repeat containing 5A NW_004955409 29208050 29312752 + 102011510 AGCD01010256;AGCD01010257;AGCD01010258;AGCD01010259;GBDJ01239001;XM_005376957;XM_005376960;XM_013510379;XM_013510380;XM_013510381;XM_013510382 XP_005377014;XP_005377017;XP_013365833;XP_013365834;XP_013365835;XP_013365836 MODEL 8956187 protein-coding Hmx2 H6 family homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); inner ear morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH High Myopia (ortholog) NW_004955477 1294479 1302433 + 102026107 AGCD01055504;GBDF01273104;XM_005401958;XM_005401959 XP_005402015;XP_005402016 MODEL 8708805 ncrna LOC102024125 uncharacterized LOC102024125 NW_004955422 26926363 26963457 - 102024125 AGCD01023305;AGCD01023306;AGCD01023307;GBDF01036002;XR_260925 MODEL 8732839 ncrna LOC102007033 uncharacterized LOC102007033 NW_004955424 2197417 2203371 + 102007033 AGCD01024264;XR_001234174;XR_261035 MODEL 8843827 protein-coding Gdf5 growth differentiation factor 5 ENCODES a protein that exhibits BMP binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); chondroblast differentiation (ortholog); ASSOCIATED WITH acromesomelic dysplasia (ortholog); acromesomelic dysplasia, Grebe type (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog) NW_004955422 25992081 25997122 + 102012449 AGCD01023273;GBBH01147047;XM_005384796 XP_005384853 MODEL 8950165 protein-coding Fign fidgetin, microtubule severing factor ASSOCIATED WITH Developmental Disease (ortholog); FOUND IN nuclear matrix (ortholog) NW_004955449 10271125 10400631 + 102015258 AGCD01042070;AGCD01042071;AGCD01042072;GBDF01297223;XM_005393306;XM_005393307;XM_013518797 XP_005393363;XP_005393364;XP_013374251 MODEL 9020311 protein-coding Dysf dysferlin ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to osmotic stress (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2B (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955424 13756130 13970437 - 102025026 AGCD01024637;AGCD01024638;AGCD01024639;AGCD01024640;GBDJ01131542;XM_005385587;XM_005385588;XM_005385589;XM_005385590;XM_005385591;XM_005385592;XM_005385593;XM_005385594;XM_005385595;XM_005385596;XM_005385597;XM_005385598;XM_005385599;XM_005385600;XM_013514696;XM_013514697 XP_005385644;XP_005385645;XP_005385646;XP_005385647;XP_005385648;XP_005385649;XP_005385650;XP_005385651;XP_005385652;XP_005385653;XP_005385654;XP_005385655;XP_005385656;XP_005385657;XP_013370150;XP_013370151 MODEL 10299668 ncrna LOC106150081 uncharacterized LOC106150081 NW_004955464 10897039 10908003 - 106150081 AGCD01050127;AGCD01050128;AGCD01050129;AGCD01050130;XR_001236674 MODEL 8881253 pseudo LOC102010800 splicing regulatory glutamine/lysine-rich protein 1-like NW_004955479 4446160 4449021 - 102010800 AGCD01056323 MODEL 8875817 pseudo LOC102019621 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 pseudogene NW_004955504 420550 422042 - 102019621 AGCD01064819 MODEL 8773156 protein-coding Fam25a family with sequence similarity 25 member A NW_004955510 5975395 5977534 + 102012674 AGCD01066297;AGCD01066298;GBDJ01000716;XM_005407909 XP_005407966 MODEL 8851158 protein-coding Gpat3 glycerol-3-phosphate acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN glycerol-3-phosphate metabolic process (ortholog); phospholipid biosynthetic process (ortholog); regulation of TOR signaling (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955474 6119516 6192784 - 102027519 AGCD01054448;AGCD01054449;AGCD01054450;AGCD01054451;AGCD01054452;AGCD01054453;AGCD01054454;AGCD01054455;AGCD01054456;AGCD01054457;AGCD01054458;GBCE01113199;XM_005401380 XP_005401437 MODEL 8870504 protein-coding LOC102018035 sialic acid-binding Ig-like lectin 8 NW_004955558 1238069 1248047 - 102018035 AGCD01073424;GBBH01137499;XM_005412701;XM_013508887;XM_013508888;XM_013508889;XM_013508890;XM_013508891;XM_013508892;XM_013508893;XM_013508894;XR_001232331;XR_001232332 XP_005412758;XP_013364341;XP_013364342;XP_013364343;XP_013364344;XP_013364345;XP_013364346;XP_013364347;XP_013364348 MODEL 39133009 snrna U1 U1 spliceosomal RNA 8890896 protein-coding LOC102022422 trace amine-associated receptor 8b-like NW_004955436 13126382 13132776 - 102022422 AGCD01033854;XM_013516594 XP_013372048 MODEL 9005751 pseudo LOC102019931 cytospin-B pseudogene NW_004955424 4173433 4175625 + 102019931 AGCD01024341 MODEL 8736685 pseudo LOC102003482 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 pseudogene NW_004955535 3151906 3152089 + 102003482 AGCD01070687 MODEL 9012396 protein-coding Aen apoptosis enhancing nuclease ENCODES a protein that exhibits DNA exonuclease activity (ortholog); exonuclease activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); response to ionizing radiation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955416 16328655 16338069 - 102007548 AGCD01017352;GBBH01051516;XM_005381572 XP_005381629 MODEL 8711762 protein-coding Ttc4 tetratricopeptide repeat domain 4 INVOLVED IN defense response to virus (ortholog); innate immune response (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament cytoskeleton (ortholog); nucleus (ortholog) NW_004955464 4629061 4669054 - 102027156 AGCD01049992;GBDF01123002;XM_005398518;XM_005398519;XR_001236700 XP_005398575;XP_005398576 MODEL 8958217 protein-coding Setd1a SET domain containing 1A, histone lysine methyltransferase ENCODES a protein that exhibits beta-catenin binding (ortholog); histone H3K4 methyltransferase activity (ortholog); RNA binding (ortholog); INVOLVED IN brain development (ortholog); positive regulation of gene expression (ortholog); positive regulation of neural precursor cell proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disease (ortholog); early-onset epilepsy 2 (ortholog); epilepsy (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955493 7808652 7834886 + 102020131 AGCD01061227;AGCD01061228;AGCD01061229;GBCB01061270;XM_013504748 XP_013360202 MODEL 8706988 protein-coding Pten phosphatase and tensin homolog ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult behavior (ortholog); angiogenesis (ortholog); apoptotic process (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955425 5007811 5091829 - 102026655 AGCD01025329;AGCD01025330;AGCD01025331;AGCD01025332;GBDJ01081006;XM_013514767 XP_013370221 MODEL 39132345 snrna U6 U6 spliceosomal RNA 8986610 protein-coding Casp6 caspase 6 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); acute inflammatory response to non-antigenic stimulus (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955496 575839 584287 + 102026232 AGCD01062235;GBDF01178103;XM_005406189;XM_013505399 XP_005406246;XP_013360853 MODEL 39132376 rrna 5S_rRNA 5S ribosomal RNA 39134488 misc_rna 7SK 7SK RNA 39134177 misc_rna 7SK 7SK RNA 8713405 protein-coding Iqce IQ motif containing E INVOLVED IN limb morphogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to motile cilium (ortholog); ASSOCIATED WITH brachydactyly (ortholog); genetic disease (ortholog); Postaxial Polydactyly, Type A1 (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955460 12676649 12724613 + 102013257 AGCD01048661;AGCD01048662;GBBH01003129;GBDF01005523;XM_013521153 XP_013376607 MODEL 8806691 protein-coding Kif1a kinesin family member 1A ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde dendritic transport (ortholog); anterograde neuronal dense core vesicle transport (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955542 756834 832805 + 102014171 AGCD01071480;AGCD01071481;GBCB01099302;XM_005411149;XM_005411150;XM_005411151;XM_005411152;XM_013508118;XM_013508119;XM_013508120;XM_013508121;XM_013508122;XM_013508124;XM_013508125 XP_005411206;XP_005411207;XP_005411208;XP_005411209;XP_013363572;XP_013363573;XP_013363574;XP_013363575;XP_013363576;XP_013363578;XP_013363579 MODEL 8954543 protein-coding Pld2 phospholipase D2 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to phorbol 13-acetate 12-myristate (ortholog); G protein-coupled receptor internalization (ortholog); neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; glycerophospholipid metabolic pathway; mTOR signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Experimental Seizures (ortholog); FOUND IN brush border membrane (ortholog); caveola (ortholog); lamellipodium (ortholog) NW_004955467 10239177 10250516 + 102016147 AGCD01051558;GBBH01166668;XM_005399602;XM_013522221;XM_013522222 XP_005399659;XP_013377675;XP_013377676 MODEL 8728732 pseudo LOC102005210 bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA pseudogene NW_004955403 36749260 36750838 + 102005210 AGCD01002547 MODEL 39133912 misc_rna 7SK 7SK RNA 8935616 protein-coding LOC102005976 sialic acid-binding Ig-like lectin 10 NW_004955558 999418 1002833 + 102005976 AGCD01073409;AGCD01073410;GBDI01356195;GBDJ01063531;XM_013508839 XP_013364293 MODEL 8734591 protein-coding Ascl3 achaete-scute family bHLH transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN epithelium development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955414 24688233 24691361 - 102024994 AGCD01015553;GBBH01032886;XM_005380248 XP_005380305 MODEL 8950158 ncrna LOC102015036 uncharacterized LOC102015036 NW_004955511 4340197 4349265 + 102015036 AGCD01066500;GBDF01188924;XR_001231693;XR_264428;XR_264429 MODEL 8971667 ncrna LOC102010804 uncharacterized LOC102010804 NW_004955417 3968290 4005083 + 102010804 AGCD01017933;AGCD01017934;GBCB01092654;XR_001233425;XR_001233426;XR_001233427;XR_001233428;XR_001233429 MODEL 8735442 protein-coding Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 ENCODES a protein that exhibits misfolded protein binding (ortholog); signaling receptor binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN mRNA modification (ortholog); negative regulation of neurogenesis (ortholog); positive regulation of ATP-dependent activity (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); cystic kidney disease (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) NW_004955420 21097292 21113053 - 102028760 AGCD01021123;AGCD01021124;AGCD01021125;GBCC01049191;GBDI01118251;XM_013513338 XP_013368792 MODEL 8803053 protein-coding Atp6v0a1 ATPase H+ transporting V0 subunit a1 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN regulation of macroautophagy (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autistic disorder (ortholog); developmental and epileptic encephalopathy 104 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955451 16396287 16442596 + 102018250 AGCD01043675;AGCD01043676;GBCB01020461;GBDF01050271;XM_005394459 XP_005394516 MODEL 8711623 protein-coding Apoa5 apolipoprotein A5 ENCODES a protein that exhibits enzyme binding (ortholog); heparin binding (ortholog); lipase activator activity (ortholog); INVOLVED IN acylglycerol homeostasis (ortholog); animal organ regeneration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH cerebral infarction (ortholog); coronary artery disease (ortholog); Familial Hyperchylomicronemia Syndrome (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955412 18128861 18131752 - 102021108 AGCD01012926;XM_005378185;XM_005378186;XM_013511206 XP_005378242;XP_005378243;XP_013366660 MODEL 39133318 snrna U4 U4 spliceosomal RNA 10185737 ncrna LOC106147102 uncharacterized LOC106147102 NW_004955518 1834469 1841480 + 106147102 AGCD01067766;XR_001231854;XR_001231855 MODEL 8821840 protein-coding LOC102010015 probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 NW_004955785 867 11463 + 102010015 AGCD01078339;AGCD01078340;AGCD01078341;AGCD01078342;XM_013510191 XP_013365645 MODEL 8810957 protein-coding Pdgfrl platelet derived growth factor receptor like ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog) NW_004955552 2041267 2077971 - 102027237 AGCD01072797;GBCE01066660;GBDI01112826;XM_013508605 XP_013364059 MODEL 8724932 pseudo LOC102021426 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955409 37557200 37558907 - 102021426 AGCD01010529 MODEL 8924083 protein-coding LOC102017271 butyrophilin-like protein 1 NW_004955437 739176 750324 + 102017271 AGCD01034158;GBCQ01059693;XM_013516724 XP_013372178 MODEL 9064075 protein-coding LOC102024127 secretory carrier-associated membrane protein 4 NW_004955495 6123148 6142488 - 102024127 AGCD01062051;AGCD01062052;GBCB01076724;XM_005405943;XM_013505268;XM_013505269;XM_013505270;XM_013505271;XM_013505272 XP_005406000;XP_013360722;XP_013360723;XP_013360724;XP_013360725;XP_013360726 MODEL 9032158 protein-coding Gdf6 growth differentiation factor 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); cell migration (ortholog); ASSOCIATED WITH CAKUT (ortholog); cleft lip (ortholog); cleft palate (ortholog) NW_004955417 12152448 12169173 - 102004926 AGCD01018154;GBBH01226389;XM_005381831 XP_005381888 MODEL 8984267 protein-coding Adam23 ADAM metallopeptidase domain 23 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); presynaptic membrane (ortholog) NW_004955457 8362639 8518281 - 102028163 AGCD01046908;AGCD01046909;AGCD01046910;AGCD01046911;GBBH01008349;GBDJ01144488;XM_013520784;XM_013520785 XP_013376238;XP_013376239 MODEL 8845134 protein-coding LOC102019623 olfactory receptor 8K5-like NW_004955511 1421949 1422887 + 102019623 AGCD01066366;XM_013506424 XP_013361878 MODEL 8880324 protein-coding Aldh9a1 aldehyde dehydrogenase 9 family member A1 ENCODES a protein that exhibits 4-trimethylammoniobutyraldehyde dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); amine binding (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955462 10998147 11017360 + 102004148 AGCD01049381;AGCD01049382;AGCD01049383;GBCQ01009425;GBDF01000076;XM_013521373 XP_013376827 MODEL 8994578 protein-coding Tpcn2 two pore segment channel 2 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); endocytosis involved in viral entry into host cell (ortholog); endosome to lysosome transport of low-density lipoprotein particle (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH brain infarction (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); Skin/Hair/Eye Pigmentation, Variation In, 10 (ortholog); FOUND IN endolysosome membrane (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955422 16899730 16923962 - 102026124 AGCD01022904;GBDI01264096;XM_005384252;XM_013514134;XM_013514135;XM_013514136 XP_005384309;XP_013369588;XP_013369589;XP_013369590 MODEL 8967078 protein-coding Rexo1 RNA exonuclease 1 homolog ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955495 6194380 6219907 + 102025594 AGCD01062056;AGCD01062057;GBDF01010614;XM_005405946 XP_005406003 MODEL 8998774 protein-coding Thy1 Thy-1 cell surface antigen ENCODES a protein that exhibits enzyme binding (ortholog); GPI anchor binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Reperfusion Injury (ortholog); retinal disease (ortholog); FOUND IN apical plasma membrane (ortholog); axolemma (ortholog); cell surface (ortholog) NW_004955412 20480284 20484958 - 102008928 AGCD01013009;GBDI01065511;XM_005378342 XP_005378399 MODEL 9067327 protein-coding LOC102005211 mRNA cap guanine-N7 methyltransferase NW_004956021 841 8406 + 102005211 AGCD01078894;GBCC01050559;XM_013510215 XP_013365669 MODEL 8773985 protein-coding Gpat4 glycerol-3-phosphate acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); diacylglycerol metabolic process (ortholog); fatty acid metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955536 1266920 1313765 - 102013539 AGCD01070752;AGCD01070753;AGCD01070754;AGCD01070755;GBDF01008951;XM_005410526;XM_005410527 XP_005410583;XP_005410584 MODEL 8956595 protein-coding Chad chondroadherin INVOLVED IN bone development (ortholog); cartilage condensation (ortholog); negative regulation of bone trabecula formation (ortholog) NW_004955451 11285822 11289644 + 102013038 AGCD01043345;GBBH01207076;XM_005394170 XP_005394227 MODEL 8784614 protein-coding LOC102022423 uncharacterized LOC102022423 NW_004955529 3940781 3982450 + 102022423 AGCD01069807;AGCD01069808;GBDJ01291530;XM_005410082 XP_005410139 MODEL 9052817 protein-coding LOC102012414 cytochrome P450 4B1 ENCODES a protein that exhibits heterocyclic compound binding (ortholog); INVOLVED IN biphenyl metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH autism spectrum disorder (ortholog); chronic obstructive pulmonary disease (ortholog); urinary bladder cancer (ortholog) NW_004955464 11539467 11556519 - 102012414 AGCD01050155;GBDF01188215;XM_005398649;XM_005398650 XP_005398706;XP_005398707 MODEL 8726571 pseudo LOC102003484 RNA-binding protein 25 pseudogene NW_004955437 14612893 14618799 - 102003484 AGCD01034678 MODEL 8761180 protein-coding Wdr26 WD repeat domain 26 ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955520 950505 983963 + 102006813 AGCD01068039;GBBH01167150;GBDF01044046;XM_005409219;XM_013507050 XP_005409276;XP_013362504 MODEL 8820400 protein-coding Bag5 BAG cochaperone 5 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-folding chaperone binding (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN Golgi organization (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH dilated cardiomyopathy 2F (ortholog); genetic disease (ortholog); Parkinson's disease (ortholog); FOUND IN cytosol (ortholog); inclusion body (ortholog); junctional membrane complex (ortholog) NW_004955538 2412297 2416094 - 102011586 AGCD01071124;AGCD01071125;GBDI01065509;XM_005410783;XM_005410784;XM_005410785;XM_005410786 XP_005410840;XP_005410841;XP_005410842;XP_005410843 MODEL 8989734 protein-coding Dytn dystrotelin NW_004955457 8269960 8332498 + 102027494 AGCD01046907;GBDF01273348;XM_013520662 XP_013376116 MODEL 8753328 protein-coding Setd1b SET domain containing 1B, histone lysine methyltransferase ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955482 6598176 6621944 - 102003135 AGCD01057403;AGCD01057404;AGCD01057405;AGCD01057406;GBCB01131998;GBDK01358092;XM_013503539 XP_013358993 MODEL 8935083 protein-coding Pter phosphotriesterase related ENCODES a protein that exhibits N-acetyltaurine hydrolase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); regulation of appetite (ortholog); taurine metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955429 11296833 11356082 - 102030449 AGCD01028686;AGCD01028687;GBDK01220368;XM_005386971;XM_013515555;XM_013515556;XM_013515557 XP_005387028;XP_013371009;XP_013371010;XP_013371011 MODEL 8763512 protein-coding Trpc6 transient receptor potential cation channel subfamily C member 6 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to hypoxia (ortholog); negative regulation of dendrite morphogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); atypical hemolytic-uremic syndrome (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955412 4905039 5019678 - 102008513 AGCD01012608;AGCD01012609;AGCD01012610;AGCD01012611;AGCD01012612;GBCE01034660;GBDK01169350;XM_013511254 XP_013366708 MODEL 8766720 protein-coding Trip12 thyroid hormone receptor interactor 12 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); heterochromatin boundary formation (ortholog); protein polyubiquitination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH Clark-Baraitser syndrome (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955453 5132776 5272250 + 102029932 AGCD01044705;AGCD01044706;GBDF01007218;XM_005395422;XM_005395424;XM_005395425;XM_005395426;XM_005395427;XM_005395428;XM_005395429;XM_005395430;XM_013519820;XM_013519821;XM_013519822 XP_005395479;XP_005395481;XP_005395482;XP_005395483;XP_005395484;XP_005395485;XP_005395486;XP_005395487;XP_013375274;XP_013375275;XP_013375276 MODEL 10258653 ncrna LOC106150082 uncharacterized LOC106150082 NW_004955464 12577313 12585933 - 106150082 AGCD01050208;AGCD01050209;GBBH01173946;XR_001236677 MODEL 9044251 protein-coding LOC102005977 interleukin-6-like NW_004955443 14546872 14547379 + 102005977 AGCD01038517;XM_005392049 XP_005392106 MODEL 9017846 protein-coding Fam32a family with sequence similarity 32 member A FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955524 1366503 1370404 - 102025159 AGCD01068749;GBCE01001404;XM_005409492;XM_013507333 XP_005409549;XP_013362787 MODEL 8942418 protein-coding Kif1b kinesin family member 1B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); kinase binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); anterograde synaptic vesicle transport (ortholog); apoptotic process involved in development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH adrenal gland pheochromocytoma (ortholog); amyotrophic lateral sclerosis (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN cytoplasmic vesicle (ortholog); mitochondrion (ortholog); neuron projection (ortholog) NW_004955486 3366791 3503845 - 102021353 AGCD01059024;AGCD01059025;AGCD01059026;AGCD01059027;AGCD01059028;AGCD01059029;AGCD01059030;AGCD01059031;AGCD01059032;GBBH01228626;GBCE01135289;XM_013504249 XP_013359703 MODEL 39132868 snrna U1 U1 spliceosomal RNA 8965466 ncrna LOC102018040 uncharacterized LOC102018040 NW_004955577 358724 365029 - 102018040 AGCD01075392;GBDF01178865;XR_001232463;XR_265079 MODEL 8985724 protein-coding LOC102019937 olfactory receptor 8K1-like NW_004955511 1459503 1460444 + 102019937 AGCD01066367;XM_013506406 XP_013361860 MODEL 9029460 protein-coding Hmx3 H6 family homeobox 3 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN brain development (ortholog); ear development (ortholog); embryo implantation (ortholog) NW_004955477 1288484 1290205 + 102010580 AGCD01055503;AGCD01055504;GBDF01059354;XM_005402079 XP_005402136 MODEL 9038898 pseudo LOC102007037 polyprenol reductase-like NW_004955426 12589238 12590965 + 102007037 AGCD01026340 MODEL 9010466 protein-coding Afap1 actin filament associated protein 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); SH2 domain binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); lactation (ortholog); lipid biosynthetic process (ortholog); ASSOCIATED WITH open-angle glaucoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); plasma membrane (ortholog) NW_004955514 2934115 3050347 + 102013642 AGCD01067090;AGCD01067091;AGCD01067092;GBDF01082445;XM_013506784;XM_013506786;XM_013506787 XP_013362238;XP_013362240;XP_013362241 MODEL 39132347 snrna U6 U6 spliceosomal RNA 39133319 snrna U4 U4 spliceosomal RNA 39131691 rrna 5S_rRNA 5S ribosomal RNA 8915054 protein-coding Ttc5 tetratricopeptide repeat domain 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to starvation (ortholog); DNA damage response (ortholog); positive regulation of mRNA catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH CEREBRAL ATROPHY AND VARIABLE FACIAL DYSMORPHISM (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955550 1073697 1105055 - 102019646 AGCD01072547;AGCD01072548;AGCD01072549;GBDK01143150;XM_005412043;XM_013508557;XM_013508558;XM_013508559;XM_013508560 XP_005412100;XP_013364011;XP_013364012;XP_013364013;XP_013364014 MODEL 8861954 protein-coding Fignl1 fidgetin like 1 INVOLVED IN cellular response to ionizing radiation (ortholog); male meiotic nuclear division (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); nicotine dependence (ortholog); FOUND IN cytoplasm (ortholog); nuclear chromosome (ortholog); nucleus (ortholog) NW_004955456 3588190 3594559 + 102028497 AGCD01046276;AGCD01046277;GBBH01071493;XM_005396606;XM_005396607;XM_005396608;XM_013520641 XP_005396663;XP_005396664;XP_005396665;XP_013376095 MODEL 39132380 rrna 5S_rRNA 5S ribosomal RNA 8914022 protein-coding Casp7 caspase 7 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to staurosporine (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; glutathione metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955431 18685408 18723221 + 102007800 AGCD01030432;AGCD01030433;GBDF01253111;XM_005387788;XM_005387789;XM_005387790;XM_005387791;XM_005387792;XM_013515832 XP_005387845;XP_005387846;XP_005387847;XP_005387848;XP_005387849;XP_013371286 MODEL 39134178 misc_rna 7SK 7SK RNA 9007939 ncrna LOC102017273 uncharacterized LOC102017273 NW_004955437 5669384 5671930 - 102017273 AGCD01034396;GBDF01181793;XR_261854 MODEL 8909146 protein-coding Iqcf2 IQ motif containing F2 NW_004955532 3532747 3534214 + 102021173 AGCD01070286;GBDF01117995;XM_005410326 XP_005410383 MODEL 8706358 protein-coding Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 ENCODES a protein that exhibits pyruvate dehydrogenase (acetyl-transferring) activity (ortholog); INVOLVED IN pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH Disease Progression (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955586 98492 114927 - 102005758 AGCD01076020;AGCD01076021;GBBH01166354;XM_005414433 XP_005414490 MODEL 8930409 protein-coding Gdf7 growth differentiation factor 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); axon guidance (ortholog); BMP signaling pathway (ortholog); FOUND IN extracellular region (ortholog) NW_004955469 3134355 3149177 + 102027836 AGCD01052290;AGCD01052291;AGCD01052292;GBDF01101331;XM_013522564 XP_013378018 MODEL 8880141 protein-coding Heatr5b HEAT repeat containing 5B ASSOCIATED WITH Cerebellar Atrophy with Seizures and Variable Developmental Delay (ortholog); pontocerebellar hypoplasia (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955441 4791317 4879318 - 102029560 AGCD01036854;AGCD01036855;AGCD01036856;GBDK01321052;XM_005390863;XM_005390864 XP_005390920;XP_005390921 MODEL 8828266 protein-coding Pld3 phospholipase D family member 3 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN myotube differentiation (ortholog); negative regulation of toll-like receptor 9 signaling pathway (ortholog); positive regulation of intralumenal vesicle formation (ortholog); ASSOCIATED WITH Alzheimer's disease 19 (ortholog); COVID-19 (ortholog); spinocerebellar ataxia 46 (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955578 884700 905426 - 102016536 AGCD01075500;GBCE01000031;XM_005414062;XM_005414063;XM_005414064;XM_005414066;XM_013509653;XM_013509654 XP_005414119;XP_005414120;XP_005414121;XP_005414123;XP_013365107;XP_013365108 MODEL 39131366 protein-coding DYTN dystrotelin 8816740 pseudo LOC102015037 40S ribosomal protein S10 pseudogene NW_004955511 6169825 6171433 - 102015037 AGCD01066598 MODEL 8974569 protein-coding Ascl5 achaete-scute family bHLH transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Odd Shapes of Teeth (ortholog); FOUND IN chromatin (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955406 37264753 37265337 - 102004240 AGCD01006572;XM_005375475 XP_005375532 MODEL 8852726 protein-coding Ptf1a pancreas associated transcription factor 1a ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cell differentiation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH cerebellar disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Decreased Urinary Activity of Kallikrein (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955429 5807804 5809522 - 102011348 AGCD01028536;AGCD01028537;GBDF01208599;XM_005387232 XP_005387289 MODEL 8919122 protein-coding Adam28 ADAM metallopeptidase domain 28 ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); metallopeptidase activity (ortholog); ASSOCIATED WITH asbestos-related lung carcinoma (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955403 47304711 47409369 + 102020740 AGCD01002885;AGCD01002886;AGCD01002887;AGCD01002888;AGCD01002889;GBDF01020328;XM_005373705;XM_013514042;XM_013514049 XP_005373762;XP_013369496;XP_013369503 MODEL 8989982 protein-coding Tpd52 tumor protein D52 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Neoplasm Recurrence, Local (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog) NW_004955444 1230730 1261839 + 102011058 AGCD01038717;AGCD01038718;GBDF01082643;XM_005392060;XM_005392062;XM_005392063;XM_013518179 XP_005392117;XP_005392119;XP_005392120;XP_013373633 MODEL 8918972 protein-coding Rexo2 RNA exonuclease 2 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN mitochondrial RNA surveillance (ortholog); nucleobase-containing compound metabolic process (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) NW_004955412 16025304 16035925 + 102013269 AGCD01012891;GBCQ01066636;XM_005378159;XM_005378160 XP_005378216;XP_005378217 MODEL 39132871 snrna U1 U1 spliceosomal RNA 10285545 ncrna LOC106147103 uncharacterized LOC106147103 NW_004955519 2068838 2070831 + 106147103 AGCD01067914;GBDK01163267;XR_001231856 MODEL 39134489 misc_rna 7SK 7SK RNA 8946544 protein-coding Apob apolipoprotein B ENCODES a protein that exhibits cholesterol transfer activity (ortholog); heparin binding (ortholog); lipase binding (ortholog); INVOLVED IN artery morphogenesis (ortholog); cellular response to lipoprotein particle stimulus (ortholog); cellular response to prostaglandin stimulus (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; forkhead class A signaling pathway; lipoprotein metabolic pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); arteriosclerosis (ortholog); autosomal recessive hypercholesterolemia (ortholog); FOUND IN chylomicron (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955469 3437422 3478408 - 102018588 AGCD01052300;GBDI01245911;JN414052;XM_005400358;XM_005400359 AEP18088;XP_005400415;XP_005400416 MODEL 9010415 protein-coding Birc2 baculoviral IAP repeat containing 2 ENCODES a protein that exhibits FBXO family protein binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); necroptotic process (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN FasL mediated signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); bowenoid papulosis (ortholog); breast cancer (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955412 5658322 5685628 + 102012516 AGCD01012645;AGCD01012646;AGCD01012647;AGCD01012648;GBCB01002048;GBDI01082457;XM_013511020 XP_013366474 MODEL 8933373 protein-coding LOC102021429 putative olfactory receptor 10D4 NW_004955412 24688405 24689343 - 102021429 AGCD01013121;XM_013510940 XP_013366394 MODEL 39133913 misc_rna 7SK 7SK RNA 8739858 protein-coding LOC102003491 U3 small nucleolar RNA-associated protein 14 homolog A-like NW_004955546 975313 987398 + 102003491 AGCD01072034;GBBH01046731;XM_005411756 XP_005411813 MODEL 8966236 ncrna LOC102019625 uncharacterized LOC102019625 NW_004955431 15052267 15054709 + 102019625 AGCD01030345;GBDF01291829;XR_001234581;XR_261475 MODEL 8811239 ncrna LOC102010807 uncharacterized LOC102010807 NW_004955419 24809478 24811822 + 102010807 AGCD01020356;GBCE01047588;XR_001233558;XR_260656 MODEL 9008640 ncrna LOC102005978 uncharacterized LOC102005978 NW_004955445 8848190 8852122 - 102005978 AGCD01039616;GBBH01088001;XR_001235594 MODEL 8831237 protein-coding Fam3a FAM3 metabolism regulating signaling molecule A INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ATP biosynthetic process (ortholog); calcium ion homeostasis (ortholog) NW_004955580 1025481 1036752 - 102005532 AGCD01075642;GBDJ01318167;XM_005414207;XM_013509716;XR_001232481 XP_005414264;XP_013365170 MODEL 9001436 protein-coding LOC102005212 regulator of G-protein signaling 12-like NW_004957078 697 1275 - 102005212 AGCD01080474;GBCE01118568;GBCE01118569;XM_005415222 XP_005415279 MODEL 9023084 protein-coding Aldoa aldolase, fructose-bisphosphate A ENCODES a protein that exhibits fructose-bisphosphate aldolase activity (ortholog); protease binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH cystadenoma (ortholog); hereditary fructose intolerance syndrome (ortholog); spondylocostal dysostosis 5 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955493 6904931 6910682 - 102023923 AGCD01061147;GBDI01013338;XM_005405193;XM_005405194;XM_013504781 XP_005405250;XP_005405251;XP_013360235 MODEL 9059509 protein-coding LOC102022432 uncharacterized LOC102022432 NW_004955561 880407 969602 - 102022432 AGCD01073827;GBDF01000326;XM_013509074 XP_013364528 MODEL 8882298 ncrna LOC102024130 uncharacterized LOC102024130 NW_004955424 13576197 13580849 - 102024130 AGCD01024636;GBDF01251114;XR_261063 MODEL 8849034 pseudo LOC102012421 5-azacytidine-induced protein 2 pseudogene NW_004955414 22550353 22553184 + 102012421 AGCD01015461 MODEL 8995124 pseudo LOC102019938 vesicle-trafficking protein SEC22b pseudogene NW_004955513 2495130 2495635 + 102019938 AGCD01066880 MODEL 9060254 pseudo LOC102018045 laccase domain-containing protein 1-like NW_004955592 623122 623565 - 102018045 AGCD01076320 MODEL 8729703 protein-coding Fignl2 fidgetin like 2 INVOLVED IN microtubule severing (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of cell migration (ortholog); FOUND IN cell leading edge (ortholog) NW_004955547 2205614 2234417 - 102016852 AGCD01072261;AGCD01072262;AGCD01072263;AGCD01072264;GBDK01115749;XM_005411962 XP_005412019 MODEL 8942378 protein-coding Wdr27 WD repeat domain 27 FOUND IN nucleoplasm (ortholog) NW_004955411 3928775 4123191 + 102021105 AGCD01011562;AGCD01011563;AGCD01011564;AGCD01011565;AGCD01011566;AGCD01011567;AGCD01011568;AGCD01011569;AGCD01011570;AGCD01011571;GBDK01107452;XM_013510744;XM_013510746;XM_013510747;XM_013510748;XM_013510749;XM_013510750 XP_013366198;XP_013366200;XP_013366201;XP_013366202;XP_013366203;XP_013366204 MODEL 9066994 protein-coding Rexo4 REX4 homolog, 3'-5' exonuclease ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); double-stranded DNA binding (ortholog); endonuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA repair (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955513 2745220 2754927 - 102015878 AGCD01066888;GBBH01077836;XM_005408440;XM_005408443;XM_005408444;XM_005408445 XP_005408497;XP_005408500;XP_005408501;XP_005408502 MODEL 8885848 ncrna LOC102017274 uncharacterized LOC102017274 NW_004955437 13226136 13228012 - 102017274 AGCD01034653;GBCB01098820;XR_261876 MODEL 8855500 protein-coding Bag6 BAG cochaperone 6 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); misfolded protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); brain development (ortholog); endoplasmic reticulum stress-induced pre-emptive quality control (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); lung non-small cell carcinoma (ortholog); osteoarthritis (ortholog); FOUND IN BAT3 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 176848 188243 - 102015444 AGCD01034108;GBCE01031762;XM_005389335;XM_005389336;XM_005389339;XM_005389340;XM_005389341;XM_005389343;XM_005389345;XM_013516841;XM_013516842;XM_013516843;XM_013516844;XM_013516845 XP_005389392;XP_005389393;XP_005389396;XP_005389397;XP_005389398;XP_005389400;XP_005389402;XP_013372295;XP_013372296;XP_013372297;XP_013372298;XP_013372299 MODEL 8822029 protein-coding Trpc7 transient receptor potential cation channel subfamily C member 7 ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); manganese ion transport (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955408 31260767 31408852 - 102015178 AGCD01008824;GBDF01075659;XM_013507541 XP_013362995 MODEL 8935851 protein-coding Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 ENCODES a protein that exhibits pyruvate dehydrogenase (acetyl-transferring) activity (ortholog); INVOLVED IN pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH azoospermia (ortholog); spermatogenic failure 1 (ortholog); spermatogenic failure 70 (ortholog); FOUND IN mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) NW_004955405 6383088 6383946 + 102016014 AGCD01004696;GBDF01011264;XM_005374677 XP_005374734 MODEL 8940649 protein-coding Trip13 thyroid hormone receptor interactor 13 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN double-strand break repair (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); COVID-19 (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); FOUND IN male germ cell nucleus (ortholog) NW_004955504 434187 452636 + 102029767 AGCD01064819;GBDF01223456;XM_005407032 XP_005407089 MODEL 9042135 protein-coding Atp6v0a2 ATPase H+ transporting V0 subunit a2 ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH Autosomal Recessive Cutis Laxa (ortholog); autosomal recessive cutis laxa type IIA (ortholog); congenital disorder of glycosylation Il (ortholog); FOUND IN acrosomal vesicle (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955482 5311434 5337684 - 102026867 AGCD01057325;GBBH01063657;GBDI01120599;XM_013503544 XP_013358998 MODEL 8846200 protein-coding Thyn1 thymocyte nuclear protein 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 35061874 35067631 - 102003426 AGCD01013397;GBDJ01191132;XM_005378596;XM_013511064;XM_013511065;XM_013511066;XM_013511067 XP_005378653;XP_013366518;XP_013366519;XP_013366520;XP_013366521 MODEL 8769933 protein-coding Casp8 caspase 8 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); cysteine-type endopeptidase activity (ortholog); death effector domain binding (ortholog); INVOLVED IN response to auditory stimulus; angiogenesis (ortholog); apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; extrinsic apoptotic pathway; FasL mediated signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN CD95 death-inducing signaling complex (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955403 322082 348591 - 102023097 AGCD01001688;AGCD01001689;GBDK01089606;XM_005373209;XM_005373210;XM_005373212;XM_013511750 XP_005373266;XP_005373267;XP_005373269;XP_013367204 MODEL 8781372 protein-coding Chadl chondroadherin like ENCODES a protein that exhibits collagen binding (ortholog); collagen fibril binding (ortholog); INVOLVED IN negative regulation of chondrocyte differentiation (ortholog); negative regulation of collagen fibril organization (ortholog); ASSOCIATED WITH Osteoarthritis, Hip (ortholog); FOUND IN extracellular matrix (ortholog); gel phase of interstitial matrix (ortholog) NW_004955413 26846714 26862082 - 102012085 AGCD01014482;AGCD01014483;AGCD01014484;GBBH01207075;XM_013511352 XP_013366806 MODEL 8717689 protein-coding Pld4 phospholipase D family member 4 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); negative regulation of toll-like receptor 7 signaling pathway (ortholog); negative regulation of toll-like receptor 9 signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); rheumatoid arthritis (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955538 3296581 3303187 + 102029444 AGCD01071157;GBDJ01237040;XM_005410848 XP_005410905 MODEL 8812611 ncrna LOC102007038 uncharacterized LOC102007038 NW_004955427 4191968 4222744 + 102007038 AGCD01026962;GBDF01207463;XR_261229 MODEL 39132348 snrna U6 U6 spliceosomal RNA 8785922 protein-coding Adam29 ADAM metallopeptidase domain 29 INVOLVED IN energy homeostasis (ortholog); gene expression (ortholog); respiratory system process (ortholog); FOUND IN external side of plasma membrane (ortholog); sperm head plasma membrane (ortholog) NW_004955403 32233940 32257782 - 102020404 AGCD01002432;AGCD01002433;GBDF01002252;XM_005373528;XM_005373529;XM_013515226;XM_013515229 XP_005373585;XP_005373586;XP_013370680;XP_013370683 MODEL 39132873 snrna U1 U1 spliceosomal RNA 10117645 ncrna LOC106147104 uncharacterized LOC106147104 NW_004955408 30140623 30150670 - 106147104 AGCD01008799;GBDF01155921;XR_001231858 MODEL 39132386 rrna 5S_rRNA 5S ribosomal RNA 8970421 ncrna LOC102021430 uncharacterized LOC102021430 NW_004955413 23270738 23276929 + 102021430 AGCD01014329;GBDF01129567;XR_260096 MODEL 39133914 misc_rna 7SK 7SK RNA 8867716 protein-coding Gpatch1 G-patch domain containing 1 FOUND IN catalytic step 2 spliceosome (ortholog) NW_004955574 569204 609323 + 102027361 AGCD01075111;AGCD01075112;GBDF01225031;XM_005413834;XM_013509577 XP_005413891;XP_013365031 MODEL 8993491 ncrna LOC102010017 uncharacterized LOC102010017 NW_004955451 14756261 14759461 - 102010017 AGCD01043570;GBDK01285033;XR_262608 MODEL 8833167 pseudo LOC102015038 olfactory receptor 1020-like NW_004955511 4991649 4998617 + 102015038 AGCD01066541 MODEL 8770015 protein-coding Afap1l1 actin filament associated protein 1 like 1 ASSOCIATED WITH neuromuscular disease (ortholog) NW_004955415 5079876 5140905 - 102026969 AGCD01015990;GBCE01008759;GBDK01009948;XM_005380616 XP_005380673 MODEL 8997286 protein-coding Asf1a anti-silencing function 1A histone chaperone ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); muscle cell differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH melanoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955436 1635397 1640989 + 102011241 AGCD01033583;GBCQ01039950;XM_005389126 XP_005389183 MODEL 9045826 protein-coding Hnf1a HNF1 homeobox A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); apoptotic nuclear changes (ortholog); bile acid and bile salt transport (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH adenoid squamous cell carcinoma (ortholog); breast carcinoma (ortholog); cerebral infarction (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955455 10694102 10717613 - 102005773 AGCD01045961;GBCQ01097595;XM_005396490;XM_013520476 XP_005396547;XP_013375930 MODEL 8951421 protein-coding Ptgdr prostaglandin D2 receptor ENCODES a protein that exhibits prostaglandin D receptor activity (ortholog); prostaglandin J receptor activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); cellular response to prostaglandin D stimulus (ortholog); inflammatory response (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin D2 signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955409 10801370 10810161 - 102011282 AGCD01009485;GBDK01397856;XM_005376785 XP_005376842 MODEL 39131692 rrna 5S_rRNA 5S ribosomal RNA 8996910 protein-coding Tpd52l1 TPD52 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); positive regulation of apoptotic signaling pathway (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955436 6648140 6672474 + 102027674 AGCD01033691;GBCE01154531;GBDI01175773;XM_013516685 XP_013372139 MODEL 39133320 snrna U4 U4 spliceosomal RNA 39134490 misc_rna 7SK 7SK RNA 8708675 protein-coding Ttc6 tetratricopeptide repeat domain 6 ASSOCIATED WITH Meckel syndrome (ortholog) NW_004955409 23349294 23580993 - 102020218 AGCD01010059;AGCD01010060;AGCD01010061;AGCD01010062;AGCD01010063;AGCD01010064;AGCD01010065;AGCD01010066;AGCD01010067;AGCD01010068;GBBH01162846;GBDI01355143;XM_013510165 XP_013365619 MODEL 10241658 ncrna LOC106150083 uncharacterized LOC106150083 NW_004955464 10884038 10886740 + 106150083 AGCD01050127;XR_001236678 MODEL 39134179 misc_rna 7SK 7SK RNA 8908136 ncrna LOC102003492 uncharacterized LOC102003492 NW_004955442 7304160 7304657 + 102003492 AGCD01037623;GBDF01000001;XR_262125 MODEL 8912562 protein-coding Setd2 SET domain containing 2, histone lysine methyltransferase ENCODES a protein that exhibits alpha-tubulin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell migration involved in vasculogenesis (ortholog); coronary vasculature morphogenesis (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955420 25070626 25178410 + 102005942 AGCD01021344;AGCD01021345;AGCD01021346;GBDF01080632;GBDF01080633;XM_013513427 XP_013368881 MODEL 8788609 protein-coding Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); cytosine deaminase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cytidine to uridine editing (ortholog); defense response to virus (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH colon cancer (ortholog); Experimental Liver Cirrhosis (ortholog); familial hyperlipidemia (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955413 6471933 6480475 - 102017972 AGCD01013743;GBDF01301259;XM_005379611 XP_005379668 MODEL 8998177 pseudo LOC102018046 eukaryotic translation initiation factor 5 pseudogene NW_004955596 640860 643263 + 102018046 AGCD01076525 MODEL 8772683 protein-coding Gdf9 growth differentiation factor 9 INVOLVED IN blastocyst development (ortholog); embryonic cleavage (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); polycystic ovary syndrome (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog) NW_004955408 4234208 4239795 - 102016569 AGCD01008098;AGCD01008099;GBCB01038530;GBDF01127692;XM_013508374;XM_013508382 XP_013363828;XP_013363836 MODEL 8823685 protein-coding Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); ERAD pathway (ortholog); protein folding (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) NW_004955437 19266206 19285654 + 102028576 AGCD01034841;GBDF01157510;XM_005390011;XM_005390012;XM_005390014 XP_005390068;XP_005390069;XP_005390071 MODEL 8800067 protein-coding Iqcf3 IQ motif containing F3 NW_004955532 3493451 3494864 + 102020840 AGCD01070285;GBDF01001012;XM_005410325 XP_005410382 MODEL 8838960 protein-coding Filip1 filamin A interacting protein 1 INVOLVED IN cerebral cortex development (ortholog); corpus callosum development (ortholog); modification of postsynaptic structure (ortholog); ASSOCIATED WITH NEUROMUSCULAR DISORDER, CONGENITAL, WITH DYSMORPHIC FACIES (ortholog); Osteoarthritis, Hip (ortholog); Stomach Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955502 3806016 3976013 - 102012981 AGCD01064322;AGCD01064323;GBBH01076633;GBCB01038385;XM_013505828;XM_013505829;XM_013505830 XP_013361282;XP_013361283;XP_013361284 MODEL 8766605 protein-coding Kif1c kinesin family member 1C INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); retrograde neuronal dense core vesicle transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955467 10399768 10423249 + 102024544 AGCD01051563;GBCB01004220;GBDI01060109;XM_005399633;XM_005399634 XP_005399690;XP_005399691 MODEL 8893967 pseudo LOC102019626 vesicle transport through interaction with t-SNAREs homolog 1B pseudogene NW_004955513 712796 713445 - 102019626 AGCD01066830 MODEL 8822107 protein-coding Heatr6 HEAT repeat containing 6 ASSOCIATED WITH Joubert syndrome (ortholog); Joubert syndrome 1 (ortholog) NW_004955451 204952 239572 + 102018353 AGCD01042928;AGCD01042929;AGCD01042930;GBDF01078305;XM_005393906 XP_005393963 MODEL 8849157 ncrna LOC102017275 uncharacterized LOC102017275 NW_004955541 513119 516756 - 102017275 AGCD01071353;GBDK01060528;XR_264830 MODEL 8887193 protein-coding Dzank1 double zinc ribbon and ankyrin repeat domains 1 FOUND IN centrosome (ortholog) NW_004955415 26969814 27021767 - 102017120 AGCD01016621;GBDJ01297692;XM_013512227;XM_013512228;XM_013512229 XP_013367681;XP_013367682;XP_013367683 MODEL 8699697 pseudo LOC102010809 protein FAM161A pseudogene NW_004955419 28597487 28599260 - 102010809 AGCD01020469 MODEL 8931447 protein-coding LOC102005213 homeobox protein Hox-B6 NW_004955403 20538174 20539079 - 102005213 AGCD01002162;GBCQ01033155;GBDI01385068;XM_013512796 XP_013368250 MODEL 9067808 protein-coding Fam3b FAM3 metabolism regulating signaling molecule B INVOLVED IN insulin secretion (ortholog) NW_004955407 40914408 40939850 - 102023115 AGCD01007852;GBDI01327668;XM_005375853;XM_013506145;XM_013506148 XP_005375910;XP_013361599;XP_013361602 MODEL 153211030 protein-coding CASP8AP2 caspase 8 associated protein 2 8988216 protein-coding Tia1 TIA1 cytotoxic granule associated RNA binding protein ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of cytokine production (ortholog); negative regulation of translation (ortholog); positive regulation of epithelial cell apoptotic process (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 26 (ortholog); genetic disease (ortholog); spinal muscular atrophy with lower extremity predominant 2A (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955424 14887722 14920844 + 102006791 AGCD01024664;GBDF01163127;XM_005385618;XM_005385619;XM_005385620;XM_005385621;XM_005385622;XM_005385623;XM_013514641;XR_001234178 XP_005385675;XP_005385676;XP_005385677;XP_005385678;XP_005385679;XP_005385680;XP_013370095 MODEL 9031747 protein-coding Chaf1a chromatin assembly factor 1 subunit A ENCODES a protein that exhibits chromo shadow domain binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH colon cancer (ortholog); Goldenhar syndrome (ortholog); high grade glioma (ortholog); FOUND IN CAF-1 complex (ortholog); chromatin (ortholog); nucleoplasm (ortholog) NW_004955495 4467317 4499419 - 102008121 AGCD01061924;AGCD01061925;AGCD01061926;GBDI01384930;XM_005405794;XM_013505362;XM_013505363;XM_013505364 XP_005405851;XP_013360816;XP_013360817;XP_013360818 MODEL 9032398 ncrna LOC102012422 uncharacterized LOC102012422 NW_004955474 1783853 1789261 + 102012422 AGCD01054268;GBDK01242651;XR_263587 MODEL 8777906 ncrna LOC102022433 uncharacterized LOC102022433 NW_004955444 14294781 14303672 - 102022433 AGCD01039120;AGCD01039121;GBDF01186408;XR_001235524;XR_262271 MODEL 8751917 protein-coding LOC102024131 phospholipid-transporting ATPase IB NW_004955497 4990555 5444957 + 102024131 AGCD01062590;AGCD01062591;AGCD01062592;AGCD01062593;GBCE01063645;GBDF01004666;XM_005406335;XM_013505503;XM_013505504;XM_013505505 XP_005406392;XP_013360957;XP_013360958;XP_013360959 MODEL 9012523 protein-coding Birc3 baculoviral IAP repeat containing 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); transferase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); necroptotic process (ortholog); negative regulation of necroptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); bowenoid papulosis (ortholog); brain glioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955412 5624865 5643520 + 102012174 AGCD01012644;GBDJ01123917;XM_005377975;XM_013511018;XM_013511019 XP_005378032;XP_013366472;XP_013366473 MODEL 10245657 ncrna LOC106147105 uncharacterized LOC106147105 NW_004955519 469647 492700 - 106147105 AGCD01067874;AGCD01067875;GBCB01113377;XR_001231862 MODEL 9053136 pseudo LOC102021433 rRNA 2'-O-methyltransferase fibrillarin pseudogene NW_004955471 1185113 1185892 + 102021433 AGCD01052972 MODEL 8974596 pseudo LOC102005982 DCN1-like protein 1 pseudogene NW_004955582 422159 422898 - 102005982 AGCD01075756 MODEL 8993938 protein-coding Bahcc1 BAH domain and coiled-coil containing 1 INVOLVED IN chromatin organization (ortholog); locomotory behavior (ortholog); neuron differentiation (ortholog) NW_004955506 1578943 1639048 - 102005822 AGCD01065272;GBDJ01348288;XM_005407278;XM_013506090;XM_013506091;XM_013506092;XM_013506093;XM_013506094;XM_013506095 XP_005407335;XP_013361544;XP_013361545;XP_013361546;XP_013361547;XP_013361548;XP_013361549 MODEL 8854225 protein-coding LOC102003495 protein PBDC1-like NW_004955562 2207581 2209840 + 102003495 AGCD01074028;GBCE01099202;GBDI01000979;XM_005413095 XP_005413152 MODEL 8733791 protein-coding Trpm1 transient receptor potential cation channel subfamily M member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); cellular response to light stimulus (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1C (ortholog); Ependymomas (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955416 29846374 29880922 - 102017234 AGCD01017668;XM_013512689 XP_013368143 MODEL 8863761 protein-coding Atp6v0a4 ATPase H+ transporting V0 subunit a4 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN ossification (ortholog); proton transmembrane transport (ortholog); regulation of pH (ortholog); ASSOCIATED WITH autosomal recessive distal renal tubular acidosis 3 with or without sensorineural hearing loss (ortholog); congenital myopathy 13 (ortholog); Distal Renal Tubular Acidosis (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) NW_004955494 4174542 4251450 + 102030207 AGCD01061493;GBDJ01072962;XM_005405451;XM_005405452;XM_005405453;XM_005405454;XM_013505029 XP_005405508;XP_005405509;XP_005405510;XP_005405511;XP_013360483 MODEL 8821393 protein-coding Trip4 thyroid hormone receptor interactor 4 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); nuclear estrogen receptor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH centronuclear myopathy (ortholog); Congenital Muscular Dystrophy, Davignon-Chauveau Type (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); neuromuscular junction (ortholog) NW_004955450 11005842 11088192 - 102017084 AGCD01042643;AGCD01042644;AGCD01042645;AGCD01042646;AGCD01042647;GBDJ01063421;XM_005393753 XP_005393810 MODEL 8716882 ncrna LOC102017276 uncharacterized LOC102017276 NW_004955441 14023333 14027820 + 102017276 AGCD01037169;GBDJ01298866;XR_262078 MODEL 8969991 protein-coding LOC102007039 chromosome unknown open reading frame, human C4orf51 NW_004955428 1503025 1543635 + 102007039 AGCD01027613;AGCD01027614;GBDF01008625;XM_005386650;XM_005386651;XM_005386652 XP_005386707;XP_005386708;XP_005386709 MODEL 9056562 ncrna LOC102015041 uncharacterized LOC102015041 NW_004955433 13749455 13755605 + 102015041 AGCD01031700;GBDF01180329;XR_261593 MODEL 8925764 ncrna LOC102019944 uncharacterized LOC102019944 NW_004955521 4529085 4554924 + 102019944 AGCD01068269;AGCD01068270;AGCD01068271;GBDF01076829;XR_264609 MODEL 39132878 snrna U1 U1 spliceosomal RNA 8772909 protein-coding Pld5 phospholipase D family member 5 ASSOCIATED WITH autistic disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 5810286 5994601 - 102027264 AGCD01005742;AGCD01005743;AGCD01005744;GBBH01226778;XM_013520242;XM_013520247 XP_013375696;XP_013375701 MODEL 8809579 protein-coding Tpd52l2 TPD52 like 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955528 371761 389714 - 102028674 AGCD01069526;GBDF01120852;XM_005409929;XM_005409933;XM_005409935;XM_005409939;XM_013507485;XM_013507486 XP_005409986;XP_005409990;XP_005409992;XP_005409996;XP_013362939;XP_013362940 MODEL 8970770 protein-coding Aldob aldolase, fructose-bisphosphate B ENCODES a protein that exhibits ATPase binding (ortholog); cytoskeletal protein binding (ortholog); fructose binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); fructose catabolic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; fructose and mannose metabolic pathway; fructosuria pathway; ASSOCIATED WITH autoimmune hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetes mellitus (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); microtubule organizing center (ortholog) NW_004955419 24377427 24389909 + 102008730 AGCD01020345;GBCQ01007633;XM_005382799 XP_005382856 MODEL 8931662 protein-coding Adam32 ADAM metallopeptidase domain 32 FOUND IN cell surface (ortholog); sperm principal piece (ortholog) NW_004955536 3352117 3482742 - 102020484 AGCD01070820;AGCD01070821;AGCD01070822;AGCD01070823;AGCD01070824;GBDF01043201;XM_013507724 XP_013363178 MODEL 39133915 misc_rna 7SK 7SK RNA 39134180 misc_rna 7SK 7SK RNA 9020423 protein-coding Rexo5 RNA exonuclease 5 FOUND IN nucleolus (ortholog) NW_004955493 103588 144412 + 102028764 AGCD01060838;AGCD01060839;GBDK01195535;XM_005405029;XM_005405030;XM_005405032;XM_005405033 XP_005405086;XP_005405087;XP_005405089;XP_005405090 MODEL 8889500 protein-coding Pdhb pyruvate dehydrogenase E1 subunit beta ENCODES a protein that exhibits pyruvate dehydrogenase (acetyl-transferring) activity (ortholog); INVOLVED IN pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); pyruvate decarboxylase deficiency (ortholog); FOUND IN mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) NW_004955430 1707615 1713541 + 102007796 AGCD01029132;GBBH01115754;XM_013515650 XP_013371104 MODEL 8989529 protein-coding Iqcf6 IQ motif containing F6 NW_004955532 3363575 3364276 - 102019199 AGCD01070279;GBDF01001665;XM_005410322 XP_005410379 MODEL 8713571 protein-coding Filip1l filamin A interacting protein 1 like INVOLVED IN gene expression (ortholog); hindgut development (ortholog); intracellular protein localization (ortholog); FOUND IN centrosome (ortholog) NW_004955427 1386163 1641985 - 102019187 AGCD01026873;AGCD01026874;AGCD01026875;AGCD01026876;AGCD01026877;AGCD01026878;AGCD01026879;GBDK01232581;XM_005386289;XM_013515090 XP_005386346;XP_013370544 MODEL 8976366 protein-coding Heatr9 HEAT repeat containing 9 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); response to cytokine (ortholog); response to virus (ortholog) NW_004955481 10279135 10291085 - 102021444 AGCD01057138;AGCD01057139;GBDF01088533;XM_005402893;XM_005402895 XP_005402950;XP_005402952 MODEL 8739446 protein-coding Asf1b anti-silencing function 1B histone chaperone ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); castration-resistant prostate carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) NW_004955415 32818592 32828651 - 102011307 AGCD01016735;GBDF01005758;XM_005381087 XP_005381144 MODEL 39131693 rrna 5S_rRNA 5S ribosomal RNA 39133321 snrna U4 U4 spliceosomal RNA 39134491 misc_rna 7SK 7SK RNA 9014812 protein-coding Ptgdr2 prostaglandin D2 receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); prostaglandin binding (ortholog); prostaglandin D receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); chemotaxis (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); allergic asthma (ortholog); aspergillosis (ortholog) NW_004955511 5536602 5539944 - 102018518 AGCD01066567;AGCD01066568;GBDI01346045;XM_005408286 XP_005408343 MODEL 39132387 rrna 5S_rRNA 5S ribosomal RNA 8795773 protein-coding Hnf1b HNF1 homeobox B ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branching morphogenesis of an epithelial tube (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH autosomal dominant tubulointerstitial kidney disease 2 (ortholog); CAKUT (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955451 320283 371420 + 102019127 AGCD01042932;GBDJ01130120;XM_005393907;XM_005393908;XM_005393909;XM_005393910 XP_005393964;XP_005393965;XP_005393966;XP_005393967 MODEL 8974815 protein-coding Ttc7a tetratricopeptide repeat domain 7A INVOLVED IN protein localization to plasma membrane (ortholog); ASSOCIATED WITH common variable immunodeficiency (ortholog); Gastrointestinal defects and immunodeficiency syndrome (ortholog); genetic disease (ortholog) NW_004955441 13804791 13915969 + 102016425 AGCD01037163;GBBH01093658;GBCQ01069926;XM_013517568 XP_013373022 MODEL 8962882 protein-coding LOC102022435 translation initiation factor IF-2-like NW_004955568 1247450 1253659 - 102022435 AGCD01074543;GBDF01071304;XM_013509329 XP_013364783 MODEL 8855649 protein-coding LOC102018049 vomeronasal type-2 receptor 116-like NW_004955622 20044 44768 - 102018049 AGCD01077381;XM_005415016 XP_005415073 MODEL 8919601 protein-coding Apobec2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); INVOLVED IN cytidine to uridine editing (ortholog); mRNA modification (ortholog); positive regulation of gene expression via chromosomal CpG island demethylation (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955437 7725092 7735892 + 102008768 AGCD01034465;GBCB01003930;XM_005389676 XP_005389733 MODEL 8742636 protein-coding Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); protein-L-histidine N-tele-methyltransferase activity (ortholog); INVOLVED IN actin modification (ortholog); peptidyl-histidine methylation (ortholog); peptidyl-lysine trimethylation (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog) NW_004955438 20754593 20826570 - 102028681 AGCD01035521;AGCD01035522;AGCD01035523;GBDF01008952;XM_005390415;XM_005390417 XP_005390472;XP_005390474 MODEL 8768195 protein-coding Gdi1 GDP dissociation inhibitor 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); Rab GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of axonogenesis (ortholog); negative regulation of protein targeting to membrane (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cognitive disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955580 935021 941081 + 102003189 AGCD01075630;GBBH01091858;XM_005414200;XM_013509689 XP_005414257;XP_013365143 MODEL 9031882 protein-coding LOC102019628 chromosome unknown open reading frame, human C17orf58 NW_004955432 9347128 9347594 + 102019628 AGCD01030904;XM_013515911 XP_013371365 MODEL 8851567 protein-coding Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 INVOLVED IN axonemal central apparatus assembly (ortholog); ASSOCIATED WITH Cough (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 34 (ortholog); FOUND IN axoneme (ortholog); cytoplasm (ortholog); motile cilium (ortholog) NW_004955414 17599549 17613724 - 102010892 AGCD01015245;GBDF01001565;XM_005379931 XP_005379988 MODEL 9068373 protein-coding Gpatch11 G-patch domain containing 11 FOUND IN kinetochore (ortholog); nucleoplasm (ortholog) NW_004955441 4879410 4890775 + 102030126 AGCD01036856;GBDF01278359;XM_005390865 XP_005390922 MODEL 8838068 protein-coding LOC102010018 chromosome unknown open reading frame, human C12orf50 NW_004955405 25482450 25520053 - 102010018 AGCD01005176;AGCD01005177;GBDF01007940;XM_013518146 XP_013373600 MODEL 8724553 protein-coding Kif20a kinesin family member 20A ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); midbody abscission (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); familial restrictive cardiomyopathy 6 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN midbody (ortholog); mitotic spindle (ortholog); spindle (ortholog) NW_004955418 2222398 2232775 - 102004929 AGCD01018753;GBDF01125758;XM_005382123 XP_005382180 MODEL 8873963 pseudo LOC102021434 elongation factor 1-alpha 1 pseudogene NW_004955414 28395548 28396556 - 102021434 AGCD01015681;XR_260242 MODEL 9053163 pseudo LOC102022436 60S ribosomal protein L9 pseudogene NW_004955445 2549893 2557067 - 102022436 AGCD01039357;AGCD01039358 MODEL 8951786 protein-coding Dzip1 DAZ interacting zinc finger protein 1 ENCODES a protein that exhibits BBSome binding (ortholog); molecular adaptor activity (ortholog); protein sequestering activity (ortholog); INVOLVED IN ciliary basal body organization (ortholog); cilium assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 61 (ortholog); mitral valve prolapse (ortholog); Myxomatous Mitral Valve Prolapse 3 (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955404 14428026 14481106 + 102023426 AGCD01003509;GBCE01127362;XM_005374099 XP_005374156 MODEL 8846431 protein-coding LOC102010812 zinc finger protein 35 NW_004955420 26847358 26895078 - 102010812 AGCD01021434;AGCD01021435;GBCB01086637;XM_013513410;XM_013513411;XM_013513412;XM_013513413;XM_013513414;XM_013513415 XP_013368864;XP_013368865;XP_013368866;XP_013368867;XP_013368868;XP_013368869 MODEL 8911576 protein-coding Bahd1 bromo adjacent homology domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN chromatin silencing complex (ortholog); nucleoplasm (ortholog) NW_004955416 7376794 7388577 + 102020799 AGCD01016976;GBDF01188849;XM_005381237;XM_013512626;XM_013512627 XP_005381294;XP_013368080;XP_013368081 MODEL 8873342 protein-coding Trpm2 transient receptor potential cation channel subfamily M member 2 ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); calcium ion binding (ortholog); hydrolase activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Brain Injuries (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955407 41062217 41110500 - 102025656 AGCD01007854;AGCD01007855;GBBH01060494;GBBH01060499;XM_005375860;XM_005375861;XM_013505319;XM_013505324;XM_013505330;XM_013505335 XP_005375917;XP_005375918;XP_013360773;XP_013360778;XP_013360784;XP_013360789 MODEL 10276430 ncrna LOC106150084 uncharacterized LOC106150084 NW_004955464 3065871 3081167 + 106150084 AGCD01049970;GBCB01073547;XR_001236680 MODEL 8785820 protein-coding LOC102017277 olfactory receptor 11H6-like NW_004955550 834800 835741 + 102017277 AGCD01072525;XM_005412037 XP_005412094 MODEL 8730836 protein-coding Wdr3 WD repeat domain 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH papillary thyroid carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) NW_004955435 21038053 21069213 + 102012798 AGCD01033468;GBCE01085305;XM_005389069;XM_005389070 XP_005389126;XP_005389127 MODEL 9023985 pseudo LOC102007040 olfactory receptor 13A1-like NW_004955507 6432557 6457489 + 102007040 AGCD01065716;AGCD01065717 MODEL 8977919 pseudo LOC102019946 mitochondrial import inner membrane translocase subunit TIM14 pseudogene NW_004955524 2240891 2241250 + 102019946 AGCD01068804 MODEL 8800582 protein-coding Chaf1b chromatin assembly factor 1 subunit B INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); glioblastoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN CAF-1 complex (ortholog); chromatin (ortholog); nucleoplasm (ortholog) NW_004955407 35601992 35618287 + 102011083 AGCD01007749;GBCB01094059;XM_005375738;XM_005375739 XP_005375795;XP_005375796 MODEL 8795035 protein-coding LOC102024133 melanoma-associated antigen 4-like NW_004955498 4509990 4510988 + 102024133 AGCD01063001;XM_005406484 XP_005406541 MODEL 39132884 snrna U1 U1 spliceosomal RNA 8888481 protein-coding Pld6 phospholipase D family member 6 ENCODES a protein that exhibits cardiolipin phospholipase D activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); mitochondrial fusion (ortholog); P granule organization (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH male infertility (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955577 698741 702977 + 102025634 AGCD01075411;AGCD01075412;GBCB01110589;XM_013509636 XP_013365090 MODEL 39132349 snrna U6 U6 spliceosomal RNA 8717128 ncrna LOC102005214 uncharacterized LOC102005214 NW_004955451 1877295 1878130 - 102005214 AGCD01042992;GBDF01085621;XR_001235999 MODEL 9000249 protein-coding Afap1l2 actin filament associated protein 1 like 2 ENCODES a protein that exhibits protein tyrosine kinase activator activity (ortholog); SH2 domain binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN inflammatory response (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955431 19275257 19378507 - 102017045 AGCD01030447;AGCD01030448;GBBH01150926;GBDI01098533;XM_005387827 XP_005387884 MODEL 8940625 protein-coding Iqcg IQ motif containing G ENCODES a protein that exhibits calmodulin binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN sperm axoneme assembly (ortholog); spermatid development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); manchette (ortholog) NW_004955420 11960778 11997807 + 102028971 AGCD01020848;AGCD01020849;GBDF01049203;XM_005383090;XM_013513363;XM_013513364;XM_013513365 XP_005383147;XP_013368817;XP_013368818;XP_013368819 MODEL 8863957 protein-coding Atp6v0b ATPase H+ transporting V0 subunit b ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) NW_004955537 3501011 3504408 + 102009217 AGCD01070959;GBDI01001300;XM_005410694 XP_005410751 MODEL 8906969 protein-coding Fam3c FAM3 metabolism regulating signaling molecule C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN epidermal cell differentiation (ortholog); ERK1 and ERK2 cascade (ortholog); gene expression (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955479 3086380 3128612 - 102008099 AGCD01056291;GBDJ01091812;XM_005402315 XP_005402372 MODEL 8987547 protein-coding Casp8ap2 caspase 8 associated protein 2 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); Fas signaling pathway (ortholog); PARTICIPATES IN aldosterone signaling pathway; FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955411 16535646 16568139 - 102009361 AGCD01011977;GBCB01065579;XM_005377760;XM_005377761;XM_013510890;XM_013510891 XP_005377817;XP_005377818;XP_013366344;XP_013366345 MODEL 9053481 ncrna LOC102012424 uncharacterized LOC102012424 NW_004955415 32886303 32889353 - 102012424 AGCD01016738;GBDI01281650;XR_260333 MODEL 8869592 protein-coding Trip6 thyroid hormone receptor interactor 6 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); kinase binding (ortholog); INVOLVED IN chordate embryonic development (ortholog); positive regulation of cell migration (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955573 102649 107047 - 102012378 AGCD01074962;GBCE01054728;XM_005413686 XP_005413743 MODEL 8960675 ncrna LOC102015042 uncharacterized LOC102015042 NW_004955521 2437077 2471950 - 102015042 AGCD01068206;GBBH01167474;XR_264607 MODEL 8805567 ncrna LOC102005221 uncharacterized LOC102005221 NW_004955454 2294868 2299079 + 102005221 AGCD01045015;GBDI01003932;XR_262766;XR_262767 MODEL 8868170 protein-coding Hebp1 heme binding protein 1 ENCODES a protein that exhibits heme binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955413 9832441 9856733 - 102021644 AGCD01013913;AGCD01013914;AGCD01013915;GBDK01235511;XM_005378979 XP_005379036 MODEL 8835937 protein-coding Asgr1 asialoglycoprotein receptor 1 ENCODES a protein that exhibits asialoglycoprotein receptor activity (ortholog); identical protein binding (ortholog) NW_004955467 9728918 9732548 + 102003641 AGCD01051522;GBDI01306066;XM_005399560 XP_005399617 MODEL 8922549 protein-coding Tpd52l3 TPD52 like 3 NW_004955434 10291418 10293330 + 102012997 AGCD01032336;XM_005388749 XP_005388806 MODEL 39132392 rrna 5S_rRNA 5S ribosomal RNA 10391191 ncrna LOC106147106 uncharacterized LOC106147106 NW_004955408 38852674 38865947 + 106147106 AGCD01009053;AGCD01009054;GBDK01293175;XR_001231863 MODEL 9008490 protein-coding Aldoc aldolase, fructose-bisphosphate C ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fructose-bisphosphate aldolase activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); epithelial cell differentiation (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); ASSOCIATED WITH autoimmune disease of the nervous system (ortholog); borna disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); postsynaptic cytosol (ortholog) NW_004955481 4576913 4580999 + 102030193 AGCD01056944;GBDI01055607;XM_005402747 XP_005402804 MODEL 8736669 protein-coding Ptgds prostaglandin D2 synthase ENCODES a protein that exhibits fatty acid binding (ortholog); prostaglandin-D synthase activity (ortholog); retinoid binding (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); gene expression (ortholog); negative regulation of male germ cell proliferation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH arteriosclerosis (ortholog); carotid artery disease (ortholog); chronic rhinosinusitis with nasal polyps (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) NW_004955513 5009530 5012781 + 102028669 AGCD01066949;AGCD01066950;GBCQ01008032;XM_005408569 XP_005408626 MODEL 8894279 protein-coding Apobec4 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 NW_004955406 22425097 22431148 - 102028935 AGCD01006158;GBDF01001541;XM_013521574 XP_013377028 MODEL 8853582 protein-coding Pdhx pyruvate dehydrogenase complex component X ENCODES a protein that exhibits dihydrolipoyllysine-residue acetyltransferase activity (ortholog); INVOLVED IN pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) NW_004955422 11335766 11405565 - 102013304 AGCD01022754;AGCD01022755;GBCB01022296;XM_005384137;XM_013514244 XP_005384194;XP_013369698 MODEL 8896635 protein-coding LOC102018050 arylamine N-acetyltransferase 2-like NW_004955403 42312025 42335918 + 102018050 AGCD01002751;GBDK01432435;XM_005373604;XM_005373605;XM_005373606;XM_005373607;XM_013513595 XP_005373661;XP_005373662;XP_005373663;XP_005373664;XP_013369049 MODEL 9054803 protein-coding Rfc1 replication factor C subunit 1 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN FasL mediated signaling pathway; mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Bilateral Vestibulopathy (ortholog); cerebellar ataxia (ortholog); cerebellar ataxia, neuropathy, and vestibular areflexia syndrome (ortholog); FOUND IN DNA replication factor C complex (ortholog); Elg1 RFC-like complex (ortholog); nucleoplasm (ortholog) NW_004955443 7969117 8051734 + 102004016 AGCD01038305;AGCD01038306;AGCD01038307;AGCD01038308;GBBH01228492;GBDF01085359;XM_013518069;XM_013518070 XP_013373523;XP_013373524 MODEL 9066622 protein-coding LOC102019632 zinc finger protein 14-like NW_004955524 494044 505928 - 102019632 AGCD01068679;AGCD01068680;GBDF01220106;XM_013507329 XP_013362783 MODEL 8706553 protein-coding Tial1 TIA1 cytotoxic granule associated RNA binding protein like 1 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); protein-RNA adaptor activity (ortholog); INVOLVED IN germ cell development (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Disease Progression (ortholog); Experimental Liver Cirrhosis (ortholog); malignant astrocytoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955551 370792 395836 - 102010637 AGCD01072655;GBCQ01042559;XM_005412159;XM_005412160;XM_013508586;XM_013508587 XP_005412216;XP_005412217;XP_013364040;XP_013364041 MODEL 8798867 protein-coding Dnajb14 DnaJ heat shock protein family (Hsp40) member B14 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); INVOLVED IN protein folding (ortholog); protein-containing complex assembly (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955496 7746896 7782424 + 102021891 AGCD01062385;GBDF01156236;XM_013505382 XP_013360836 MODEL 8749902 protein-coding LOC102022437 uncharacterized LOC102022437 NW_004955570 295803 309942 - 102022437 AGCD01074720;AGCD01074721;AGCD01081655;GBDF01079306;XM_013509380 XP_013364834 MODEL 39133322 snrna U4 U4 spliceosomal RNA 10393531 ncrna LOC106150085 uncharacterized LOC106150085 NW_004955464 3081169 3083506 + 106150085 AGCD01049970;GBDF01305404;XR_001236681 MODEL 8747882 protein-coding Trpm3 transient receptor potential cation channel subfamily M member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); monoatomic cation transport (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); autosomal dominant intellectual developmental disorder (ortholog); Birk-Barel syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955434 2017809 2543827 + 102022219 AGCD01032082;AGCD01032083;AGCD01032084;AGCD01032085;AGCD01032086;AGCD01032087;AGCD01032088;AGCD01032089;AGCD01032090;AGCD01032091;AGCD01032092;AGCD01032093;AGCD01032094;AGCD01032095;AGCD01032096;AGCD01032097;GBDK01308805;XM_005388528;XM_005388530;XM_005388531;XM_005388535;XM_005388536;XM_005388541;XM_005388542;XM_005388548;XM_005388550;XM_005388552 XP_005388585;XP_005388587;XP_005388588;XP_005388592;XP_005388593;XP_005388598;XP_005388599;XP_005388605;XP_005388607;XP_005388609 MODEL 8963119 ncrna LOC102003499 uncharacterized LOC102003499 NW_004955446 7604429 7625603 + 102003499 AGCD01040126;GBDF01002983;XR_262378;XR_262379 MODEL 8959995 protein-coding Ttc7b tetratricopeptide repeat domain 7B INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955438 12946594 13165239 - 102014288 AGCD01035276;AGCD01035277;AGCD01035278;AGCD01035279;AGCD01035280;GBCB01023300;XM_005390284;XM_013517238;XM_013517239;XM_013517240;XM_013517241 XP_005390341;XP_013372692;XP_013372693;XP_013372694;XP_013372695 MODEL 9049061 protein-coding LOC102005985 uncharacterized LOC102005985 NW_004955450 13197296 13199813 + 102005985 AGCD01042729;XM_005393815 XP_005393872 MODEL 9018333 protein-coding Champ1 chromosome alignment maintaining phosphoprotein 1 INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); protein localization to kinetochore (ortholog); protein localization to microtubule (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 40 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN condensed chromosome (ortholog); kinetochore (ortholog); nuclear body (ortholog) NW_004955404 3228 14695 - 102025204 AGCD01003193;GBCQ01154957;XM_005373921;XM_013515422 XP_005373978;XP_013370876 MODEL 39132889 snrna U1 U1 spliceosomal RNA 8737061 protein-coding Setd4 SET domain containing 4 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955407 35215247 35239488 - 102004560 AGCD01007732;AGCD01007733;GBCE01108284;XM_005375712;XM_005375720;XM_013504516;XM_013504518;XM_013504520;XM_013504521;XM_013504526;XM_013504535;XM_013504538 XP_005375769;XP_005375777;XP_013359970;XP_013359972;XP_013359974;XP_013359975;XP_013359980;XP_013359989;XP_013359992 MODEL 39131694 rrna 5S_rRNA 5S ribosomal RNA 8809823 pseudo LOC102010813 60S ribosomal protein L7-like 1 pseudogene NW_004955421 23607848 23608582 + 102010813 AGCD01022191 MODEL 39131482 protein-coding BIRC5 baculoviral IAP repeat containing 5 8926288 protein-coding Kif20b kinesin family member 20B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); microtubule binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN neural tube closure (ortholog); neuron projection morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH microcephaly (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); contractile ring (ortholog) NW_004955425 3261269 3313891 - 102014468 AGCD01025284;AGCD01025285;GBDF01194821;XM_005385846 XP_005385903 MODEL 39134492 misc_rna 7SK 7SK RNA 8769321 protein-coding Atp6v0c ATPase H+ transporting V0 subunit c ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of autophagic cell death (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH early-onset epilepsy 3 (ortholog); epilepsy (ortholog); thyroid gland carcinoma (ortholog); FOUND IN membrane (ortholog); proton-transporting V-type ATPase complex (ortholog); synaptic vesicle (ortholog) NW_004955442 14791795 14798066 - 102022127 AGCD01037839;GBCB01005064;XM_005391424 XP_005391481 MODEL 39133916 misc_rna 7SK 7SK RNA 8959830 ncrna LOC102007041 uncharacterized LOC102007041 NW_004955429 13140112 13203078 + 102007041 AGCD01028736;AGCD01028737;GBDF01304725;XR_261328 MODEL 8958612 protein-coding LOC102017282 zinc finger protein 64 homolog NW_004955445 6571357 6591995 + 102017282 AGCD01039489;AGCD01039490;GBDF01112028;XM_005392289;XM_013518327;XM_013518328 XP_005392346;XP_013373781;XP_013373782 MODEL 8897634 protein-coding Adam33 ADAM metallopeptidase domain 33 ASSOCIATED WITH asthma (ortholog); Breast Neoplasms (ortholog); Bronchial Hyperreactivity (ortholog) NW_004955415 14523517 14535701 - 102028291 AGCD01016300;GBCE01003714;XM_013512128 XP_013367582 MODEL 8897372 protein-coding Hnf4a hepatocyte nuclear factor 4 alpha ENCODES a protein that exhibits arachidonate binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); blood coagulation (ortholog); cell differentiation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH Congenital Hyperinsulinism (ortholog); diabetes mellitus (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 12925248 12962501 - 102018996 AGCD01039765;GBCQ01008109;XM_005392474;XM_005392475;XM_005392477;XM_005392478;XM_005392479 XP_005392531;XP_005392532;XP_005392534;XP_005392535;XP_005392536 MODEL 9007987 protein-coding LOC102019949 vomeronasal type-2 receptor 116-like NW_004955524 3644005 3713103 + 102019949 AGCD01068918;AGCD01068919;AGCD01068920;AGCD01068921;AGCD01068922;AGCD01068923;AGCD01068924;XM_013507198 XP_013362652 MODEL 8947529 ncrna LOC102015043 uncharacterized LOC102015043 NW_004955434 6384117 6397365 + 102015043 AGCD01032210;GBCB01009844;XR_001234799;XR_001234800;XR_261612 MODEL 9019269 protein-coding LOC102005225 SEC14-like protein 4 NW_004955455 4754888 4766499 - 102005225 AGCD01045688;GBDK01339586;XM_013520306 XP_013375760 MODEL 8708577 protein-coding Triqk triple QxxK/R motif containing NW_004955417 9397726 9450794 - 102017014 AGCD01018052;GBDK01025200;XM_005381781;XM_005381782;XM_005381783;XM_013512847;XM_013512848 XP_005381838;XP_005381839;XP_005381840;XP_013368301;XP_013368302 MODEL 8884717 protein-coding Fip1l1 factor interacting with PAPOLA and CPSF1 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH congestive heart failure (ortholog); Eosinophilia (ortholog); hypereosinophilic syndrome (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955447 17265269 17334197 - 102011709 AGCD01041116;AGCD01041117;AGCD01041118;GBDI01017847;XM_005392905;XM_005392906;XM_005392907;XM_005392908;XM_005392909;XM_005392910;XM_005392911;XM_005392912;XM_005392913 XP_005392962;XP_005392963;XP_005392964;XP_005392965;XP_005392966;XP_005392967;XP_005392968;XP_005392969;XP_005392970 MODEL 8726943 pseudo LOC102021437 E3 SUMO-protein ligase PIAS2 pseudogene NW_004955415 14409004 14410892 - 102021437 AGCD01016298 MODEL 8752654 protein-coding Tpgs1 tubulin polyglutamylase complex subunit 1 ENCODES a protein that exhibits microtubule binding (ortholog); tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN adult behavior (ortholog); chemical synaptic transmission (ortholog); protein polyglutamylation (ortholog); FOUND IN centrosome (ortholog) NW_004955495 7181907 7189726 - 102024585 AGCD01062124;GBDF01187983;XM_005406039 XP_005406096 MODEL 8716155 protein-coding LOC102010019 phospholipase A2, membrane associated-like NW_004955452 597005 599899 - 102010019 AGCD01043819;XM_005395284 XP_005395341 MODEL 9034745 protein-coding Plec plectin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ankyrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actomyosin contractile ring assembly actin filament organization (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 1 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2Q (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basal plasma membrane (ortholog) NW_004955454 2583138 2644308 - 102016445 AGCD01045025;AGCD01045026;GBCE01030252;XM_005395823;XM_005395824;XM_005395825;XM_005395826;XM_005395827;XM_005395828;XM_005395829;XM_005395830;XM_005395832;XM_013520104 XP_005395880;XP_005395881;XP_005395882;XP_005395883;XP_005395884;XP_005395885;XP_005395886;XP_005395887;XP_005395889;XP_013375558 MODEL 8796345 protein-coding LOC102018052 uncharacterized LOC102018052 NW_004955451 16436871 16438274 - 102018052 AGCD01043676;XM_013519142 XP_013374596 MODEL 8991887 protein-coding Trpm4 transient receptor potential cation channel subfamily M member 4 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN calcium ion transport (ortholog); calcium-mediated signaling (ortholog); cellular response to ATP (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrioventricular block (ortholog); Brugada syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955559 1539036 1581800 - 102022131 AGCD01073648;AGCD01073649;AGCD01073650;AGCD01073651;GBDJ01147170;XM_005412902;XM_005412903 XP_005412959;XP_005412960 MODEL 9063930 protein-coding Apobr apolipoprotein B receptor ENCODES a protein that exhibits apolipoprotein receptor activity (ortholog); lipoprotein particle receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN foam cell differentiation (ortholog); triglyceride metabolic process (ortholog); FOUND IN plasma membrane (ortholog) NW_004955493 6707917 6712108 + 102017350 AGCD01061131;GBDK01316922;XM_005405171 XP_005405228 MODEL 8838154 protein-coding Dzip1l DAZ interacting zinc finger protein 1 like INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); floor plate development (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); genetic disease (ortholog); polycystic kidney disease 5 (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); ciliary basal body (ortholog) NW_004955501 895245 965626 + 102011681 AGCD01064043;GBDI01220148;XM_005406770;XM_005406772;XM_013505765;XM_013505766;XM_013505767;XM_013505768;XM_013505769;XM_013505770;XM_013505771;XM_013505772;XM_013505773;XM_013505774;XM_013505775;XM_013505776;XM_013505777;XM_013505778;XM_013505779;XM_013505780 XP_005406827;XP_005406829;XP_013361219;XP_013361220;XP_013361221;XP_013361222;XP_013361223;XP_013361224;XP_013361225;XP_013361226;XP_013361227;XP_013361228;XP_013361229;XP_013361230;XP_013361231;XP_013361232;XP_013361233;XP_013361234 MODEL 8730047 protein-coding Pdia2 protein disulfide isomerase family A member 2 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN platelet aggregation (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway NW_004955442 16898563 16901867 - 102003700 AGCD01037921;GBBH01055065;XM_005391660;XM_005391661 XP_005391717;XP_005391718 MODEL 8790074 pseudo LOC102019635 60S acidic ribosomal protein P0 pseudogene NW_004955435 864236 865236 - 102019635 AGCD01032730 MODEL 8817573 protein-coding Iqch IQ motif containing H INVOLVED IN gene expression (ortholog); lncRNA transcription (ortholog); single fertilization (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN nuclear speck (ortholog) NW_004955450 8496190 8694810 - 102025640 AGCD01042566;AGCD01042567;AGCD01042568;AGCD01042569;AGCD01042570;AGCD01042571;AGCD01042572;AGCD01042573;AGCD01042574;AGCD01042575;GBBH01073913;XM_013518930;XM_013518931 XP_013374384;XP_013374385 MODEL 8728534 protein-coding Rfc2 replication factor C subunit 2 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); nucleoplasm (ortholog) NW_004955456 13659122 13671405 + 102018895 AGCD01046609;AGCD01046610;GBDK01239240;XM_005396752;XM_013520619 XP_005396809;XP_013376073 MODEL 8882041 protein-coding Casp9 caspase 9 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN response to auditory stimulus; apoptotic process (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN endometrial cancer pathway; intrinsic apoptotic pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN apoptosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955527 2613691 2630217 + 102012799 AGCD01069457;GBDF01303502;XM_013507423 XP_013362877 MODEL 8896999 protein-coding Wdr31 WD repeat domain 31 NW_004955419 14150881 14168256 + 102024679 AGCD01020013;GBDF01067538;XM_005382681 XP_005382738 MODEL 8914046 protein-coding Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 ENCODES a protein that exhibits ATPase activator activity (ortholog); Hsp70 protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 2 (ortholog); autosomal recessive distal hereditary motor neuronopathy 5 (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955453 14147286 14154396 - 102010224 AGCD01044858;GBCE01074212;XM_005395542;XM_005395545;XM_013519969;XM_013519970 XP_005395599;XP_005395602;XP_013375423;XP_013375424 MODEL 8830918 pseudo LOC102024134 eukaryotic translation initiation factor 5 pseudogene NW_004955424 14792124 14793737 + 102024134 AGCD01024660 MODEL 39132395 rrna 5S_rRNA 5S ribosomal RNA 8994520 protein-coding Kif21a kinesin family member 21A ENCODES a protein that exhibits ankyrin repeat binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); cortical microtubule organization (ortholog); regulation of axon guidance (ortholog); ASSOCIATED WITH aniridia (ortholog); congenital fibrosis of the extraocular muscles (ortholog); congenital fibrosis of the extraocular muscles 1 (ortholog); FOUND IN axonal growth cone (ortholog); presynapse (ortholog) NW_004955505 933254 1000039 + 102025143 AGCD01064964;GBCE01108734;GBDI01325563;XM_013505950 XP_013361404 MODEL 8860912 protein-coding Hebp2 heme binding protein 2 ASSOCIATED WITH Liver Neoplasms (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955436 21167519 21174559 - 102017497 AGCD01034048;GBBH01062001;GBCB01044274;XM_005389276 XP_005389333 MODEL 39132350 snrna U6 U6 spliceosomal RNA 39133917 misc_rna 7SK 7SK RNA 10281946 ncrna LOC106147107 uncharacterized LOC106147107 NW_004955520 3406551 3408481 + 106147107 AGCD01068102;GBDI01198126;XR_001231865 MODEL 8800539 protein-coding Ash1l ASH1 like histone lysine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); histone H3K9 methyltransferase activity (ortholog); INVOLVED IN decidualization (ortholog); flagellated sperm motility (ortholog); negative regulation of acute inflammatory response (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 52 (ortholog); Developmental Disabilities (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 1778905 1950656 - 102010735 AGCD01071870;AGCD01071871;AGCD01071872;AGCD01071873;AGCD01071874;AGCD01071875;AGCD01071876;GBDJ01187710;XM_013508234;XM_013508235;XM_013508236 XP_013363688;XP_013363689;XP_013363690 MODEL 8719786 protein-coding Ttc8 tetratricopeptide repeat domain 8 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN axon guidance (ortholog); camera-type eye photoreceptor cell differentiation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 8 (ortholog); fundus dystrophy (ortholog); FOUND IN BBSome (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955438 11410196 11466044 + 102008459 AGCD01035237;AGCD01035238;AGCD01035239;GBDF01187164;XM_005390265 XP_005390322 MODEL 8769812 protein-coding Ptger1 prostaglandin E receptor 1 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); negative regulation of mucus secretion (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); allergic asthma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955415 33063052 33067580 - 102016702 AGCD01016748;GBDJ01401845;XM_005381104 XP_005381161 MODEL 8739501 protein-coding Baiap2 BAR/IMD domain containing adaptor protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); dendritic shaft (ortholog) NW_004955506 1868624 1936786 - 102014380 AGCD01065277;GBBH01064214;XM_005407312;XM_005407314;XM_013506073;XM_013506074;XM_013506075 XP_005407369;XP_005407371;XP_013361527;XP_013361528;XP_013361529 MODEL 9052836 protein-coding LOC102012426 BBSome-interacting protein 1-like NW_004955478 7258776 7259420 - 102012426 AGCD01055956;XM_005402160 XP_005402217 MODEL 8961691 protein-coding Fam3d FAM3 metabolism regulating signaling molecule D INVOLVED IN aorta development (ortholog); negative regulation of insulin secretion (ortholog); neutrophil homeostasis (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN extracellular space (ortholog) NW_004955430 1541896 1569391 + 102004304 AGCD01029127;GBDI01020764;XM_005387278;XM_005387279;XM_005387280;XM_005387281;XM_005387282;XM_005387283 XP_005387335;XP_005387336;XP_005387337;XP_005387338;XP_005387339;XP_005387340 MODEL 10379247 ncrna LOC106147108 uncharacterized LOC106147108 NW_004955520 2211707 2219585 - 106147108 AGCD01068077;GBCQ01188583;XR_001231866 MODEL 8813480 pseudo LOC102010817 60S ribosomal protein L9 pseudogene NW_004955424 4777949 4778494 + 102010817 AGCD01024365 MODEL 8783834 pseudo LOC102022438 nucleolar protein of 40 kDa pseudogene NW_004955446 12790960 12791995 + 102022438 AGCD01040243 MODEL 8831395 protein-coding Tiam1 TIAM Rac1 associated GEF 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); cardiac muscle hypertrophy (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Mouth Neoplasms (ortholog); neurodevelopmental disorder with language delay and seizures (ortholog); FOUND IN axonal growth cone (ortholog); cell junction (ortholog); cell-cell contact zone (ortholog) NW_004955407 30804769 31178420 - 102012732 AGCD01007639;AGCD01007640;AGCD01007641;AGCD01007642;GBDF01087706;XM_005375657;XM_005375658;XM_005375660;XM_013504080;XM_013504086;XM_013504090 XP_005375714;XP_005375715;XP_005375717;XP_013359534;XP_013359540;XP_013359544 MODEL 8878434 protein-coding Gdi2 GDP dissociation inhibitor 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); Rab GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); negative regulation of protein localization to cilium (ortholog); small GTPase-mediated signal transduction (ortholog); PARTICIPATES IN Rab family mediated signaling pathway; ASSOCIATED WITH Down syndrome (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); synapse (ortholog) NW_004955421 22449620 22480721 - 102026648 AGCD01022136;AGCD01022137;GBBH01032868;GBDF01002947;XM_005383848;XM_005383849;XM_013513666 XP_005383905;XP_005383906;XP_013369120 MODEL 8862197 protein-coding Gpatch2 G-patch domain containing 2 ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN nuclear speck (ortholog) NW_004955406 800496 963004 + 102009012 AGCD01005622;AGCD01005623;GBDF01075248;XM_005374711;XM_005374713;XM_013519835;XM_013519850;XM_013519852 XP_005374768;XP_005374770;XP_013375289;XP_013375304;XP_013375306 MODEL 8868994 pseudo LOC102019950 peptidyl-prolyl cis-trans isomerase H pseudogene NW_004955435 1668113 1668740 - 102019950 AGCD01032749 MODEL 8978206 protein-coding Baiap2l1 BAR/IMD domain containing adaptor protein 2 like 1 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN positive regulation of actin filament polymerization (ortholog); regulation of actin cytoskeleton organization (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955460 14174592 14259416 - 102029716 AGCD01048742;GBDF01160954;GBDK01139385;XM_005397915 XP_005397972 MODEL 9045840 protein-coding LOC102005986 cytochrome P450 2B6-like NW_004955642 41045 46562 - 102005986 AGCD01077714;AGCD01077715;GBBH01208704;XM_005415047 XP_005415104 MODEL 39132397 rrna 5S_rRNA 5S ribosomal RNA 9003132 protein-coding Adam7 ADAM metallopeptidase domain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN epididymis development (ortholog); epithelial cell morphogenesis (ortholog); positive regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH infertility (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955403 47465916 47521251 + 102017186 AGCD01002890;XM_005373907 XP_005373964 MODEL 8917209 protein-coding Chat choline O-acetyltransferase ENCODES a protein that exhibits choline binding (ortholog); choline O-acetyltransferase activity (ortholog); INVOLVED IN acetylcholine biosynthetic process (ortholog); adult walking behavior (ortholog); antral ovarian follicle growth (ortholog); PARTICIPATES IN acetylcholine metabolic pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); Alzheimer's disease (ortholog); angle-closure glaucoma (ortholog); FOUND IN neuronal cell body; axon (ortholog); cytoplasm (ortholog) NW_004955556 650290 695135 - 102028690 AGCD01073178;AGCD01073179;XM_005412567 XP_005412624 MODEL 39132893 snrna U1 U1 spliceosomal RNA 39134181 misc_rna 7SK 7SK RNA 8831905 protein-coding Setd5 SET domain containing 5 ENCODES a protein that exhibits histone H3 methyltransferase activity (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K9 methyltransferase activity (ortholog); INVOLVED IN cognition (ortholog); negative regulation of transcription by RNA polymerase III (ortholog); regulation of chromatin organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 23 (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) NW_004955561 968814 1091687 + 102029235 AGCD01073827;AGCD01073828;AGCD01073829;AGCD01073830;AGCD01073831;GBDJ01090978;XM_005413006;XM_005413007;XM_005413008;XM_005413009;XM_005413010;XM_005413012;XM_005413013;XM_005413014;XM_005413015;XM_013509075;XM_013509076;XM_013509077;XM_013509078 XP_005413063;XP_005413064;XP_005413065;XP_005413066;XP_005413067;XP_005413069;XP_005413070;XP_005413071;XP_005413072;XP_013364529;XP_013364530;XP_013364531;XP_013364532 MODEL 8772336 pseudo LOC102018054 60S ribosomal protein L38 pseudogene NW_004955405 18308689 18309581 + 102018054 AGCD01005015 MODEL 8842654 protein-coding LOC102021446 olfactory receptor 6F1 NW_004955418 30343310 30344236 - 102021446 AGCD01019514;XM_005382336 XP_005382393 MODEL 8994906 protein-coding Trpm5 transient receptor potential cation channel subfamily M member 5 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN monoatomic ion transmembrane transport (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955422 14180067 14202041 - 102009068 AGCD01022855;GBBH01106809;XM_013514348;XM_013514349 XP_013369802;XP_013369803 MODEL 39134493 misc_rna 7SK 7SK RNA 8878963 protein-coding LOC102019636 uncharacterized protein CXorf21-like NW_004955529 1282997 1299375 + 102019636 AGCD01069678;AGCD01069679;AGCD01069680;GBDK01060727;XM_005410075 XP_005410132 MODEL 10165616 pseudo LOC106150086 histone H3.3C-like NW_004955464 12304578 12306426 + 106150086 AGCD01050190 MODEL 8881077 ncrna LOC102003500 uncharacterized LOC102003500 NW_004955575 638720 645615 + 102003500 AGCD01075227;GBDK01352758;XR_265069 MODEL 8977474 protein-coding LOC102007042 olfactory receptor 5M9 NW_004955511 1599335 1600267 - 102007042 AGCD01066373;XM_005407967 XP_005408024 MODEL 8994186 ncrna LOC102015044 uncharacterized LOC102015044 NW_004955435 9768415 9795007 - 102015044 AGCD01033064;AGCD01033065;AGCD01033066;GBDF01074198;XR_261676 MODEL 8745727 protein-coding Trir telomerase RNA component interacting RNase ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-3' exonuclease activity (ortholog); INVOLVED IN rRNA catabolic process (ortholog) NW_004955415 31831093 31834796 - 102020242 AGCD01016698;GBDK01012972;XM_005381022 XP_005381079 MODEL 8744389 protein-coding Gdnf glial cell derived neurotrophic factor ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor binding (ortholog); growth factor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to dexamethasone stimulus (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) NW_004955426 22386613 22412324 - 102017258 AGCD01026616;GBDJ01107563;XM_005386218;XM_005386219;XM_005386220;XM_005386221;XM_005386222;XM_005386223;XM_013514924 XP_005386275;XP_005386276;XP_005386277;XP_005386278;XP_005386279;XP_005386280;XP_013370378 MODEL 39132402 rrna 5S_rRNA 5S ribosomal RNA 8836874 protein-coding Heca HECA ribonucleoprotein granule regulator ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN negative regulation of mitotic cell cycle (ortholog); stress granule assembly (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleus (ortholog) NW_004955436 20523215 20569403 - 102013208 AGCD01034026;AGCD01034027;AGCD01034028;GBBH01005714;GBDF01049842;XM_013516653 XP_013372107 MODEL 39133324 snrna U4 U4 spliceosomal RNA 9010735 protein-coding Apoc1 apolipoprotein C1 ENCODES a protein that exhibits fatty acid binding (ortholog); lipase inhibitor activity (ortholog); phospholipase inhibitor activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); chylomicron remnant clearance (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); congestive heart failure (ortholog); Diabetic Nephropathies (ortholog); FOUND IN endoplasmic reticulum (ortholog); high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) NW_004955555 2005962 2007239 + 102028343 AGCD01073121;GBCB01060655;GBDI01216453;XM_005412478 XP_005412535 MODEL 8974109 protein-coding Tpgs2 tubulin polyglutamylase complex subunit 2 NW_004955402 23286950 23319207 - 102015678 AGCD01000621;GBDJ01041805;XM_005372833;XM_005372835;XM_005372836;XM_005372837;XM_005372838 XP_005372890;XP_005372892;XP_005372893;XP_005372894;XP_005372895 MODEL 9028039 protein-coding Adam8 ADAM metallopeptidase domain 8 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); immunoglobulin receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); canonical NF-kappaB signal transduction (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH asthma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN alpha9-beta1 integrin-ADAM8 complex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955477 10894288 10906961 - 102030074 AGCD01055709;GBDI01223313;XM_013503039;XM_013503040;XM_013503041;XM_013503042;XM_013503043;XM_013503044 XP_013358493;XP_013358494;XP_013358495;XP_013358496;XP_013358497;XP_013358498 MODEL 8869665 protein-coding Ash2l ASH2 like, histone lysine methyltransferase complex subunit ENCODES a protein that exhibits beta-catenin binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); schizophrenia (ortholog); FOUND IN euchromatin (ortholog); histone methyltransferase complex (ortholog); MLL1 complex (ortholog) NW_004955463 13731651 13757475 + 102015818 AGCD01049885;AGCD01049886;GBCE01054486;XM_005398423;XM_005398424;XM_005398425;XM_005398426;XM_005398428;XM_005398429 XP_005398480;XP_005398481;XP_005398482;XP_005398483;XP_005398485;XP_005398486 MODEL 8934594 protein-coding Pdia3 protein disulfide isomerase family A member 3 ENCODES a protein that exhibits identical protein binding (ortholog); lncRNA binding (ortholog); MHC class I protein binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); cellular response to nonylphenol (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); asphyxia neonatorum (ortholog); autoimmune hepatitis (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) NW_004955416 10197957 10221104 + 102008100 AGCD01017117;AGCD01017118;AGCD01017119;GBBH01003859;GBDF01008862;XM_013512559 XP_013368013 MODEL 8879911 ncrna LOC102021447 uncharacterized LOC102021447 NW_004955419 7019339 7024396 - 102021447 AGCD01019869;GBDF01146333;XR_260613 MODEL 8745840 protein-coding Alg1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase ENCODES a protein that exhibits chitobiosyldiphosphodolichol beta-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH brain disease (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ig (ortholog) NW_004955442 12476055 12487613 - 102026266 AGCD01037736;GBDI01223383;XM_005391248;XM_005391249 XP_005391305;XP_005391306 MODEL 8707975 protein-coding Casq1 calsequestrin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); positive regulation of release of sequestered calcium ion into cytosol (ortholog); positive regulation of store-operated calcium channel activity (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); malignant hyperthermia (ortholog); FOUND IN endoplasmic reticulum (ortholog); I band (ortholog); junctional sarcoplasmic reticulum membrane (ortholog) NW_004955468 11967678 11978836 + 102014657 AGCD01052140;GBDF01026889;XM_005400195 XP_005400252 MODEL 8701648 protein-coding Rfc3 replication factor C subunit 3 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA binding (ortholog); DNA clamp loader activity (ortholog); INVOLVED IN DNA replication (ortholog); DNA-templated DNA replication (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); nucleoplasm (ortholog) NW_004955431 12071465 12084570 - 102007456 AGCD01030254;GBCB01075231;XM_005387702 XP_005387759 MODEL 8720300 protein-coding Fam43a family with sequence similarity 43 member A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955420 14202955 14206087 - 102027191 AGCD01020933;GBDJ01138402;XM_005383185 XP_005383242 MODEL 9024258 protein-coding Hnf4g hepatocyte nuclear factor 4 gamma ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gene expression (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955444 5081013 5157988 - 102017172 AGCD01038824;GBCQ01099697;XM_005392070;XM_005392071 XP_005392127;XP_005392128 MODEL 8855346 protein-coding LOC102010819 lariat debranching enzyme NW_004955501 832433 846485 + 102010819 AGCD01064041;AGCD01064042;GBDF01305392;XM_005406750 XP_005406807 MODEL 9022240 protein-coding Afdn afadin, adherens junction formation factor ENCODES a protein that exhibits actin filament binding (ortholog); cell adhesion molecule binding (ortholog); LIM domain binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); bicellular tight junction assembly (ortholog); brain morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); breast carcinoma (ortholog); Parkinson's disease (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) NW_004955439 14324910 14428846 - 102019642 AGCD01035973;GBCB01061375;XM_013517333;XM_013517334;XM_013517335;XM_013517336;XM_013517337;XM_013517338;XM_013517339;XM_013517340;XM_013517341;XM_013517342;XM_013517343;XM_013517344;XM_013517345;XM_013517346;XM_013517347;XM_013517348;XM_013517349 XP_013372787;XP_013372788;XP_013372789;XP_013372790;XP_013372791;XP_013372792;XP_013372793;XP_013372794;XP_013372795;XP_013372796;XP_013372797;XP_013372798;XP_013372799;XP_013372800;XP_013372801;XP_013372802;XP_013372803 MODEL 39132352 snrna U6 U6 spliceosomal RNA 39133918 misc_rna 7SK 7SK RNA 8791092 ncrna LOC102010020 uncharacterized LOC102010020 NW_004955453 14159202 14163339 + 102010020 AGCD01044858;GBDF01249804;XR_001236190;XR_262732 MODEL 8990704 protein-coding Firrm FIGNL1 interacting regulator of recombination and mitosis ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN chromosome segregation (ortholog); interstrand cross-link repair (ortholog); mitotic cell cycle (ortholog); FOUND IN chromosome, centromeric region (ortholog); kinetochore (ortholog); midbody (ortholog) NW_004955462 7477260 7518227 - 102008071 AGCD01049305;GBDI01326759;XM_013521413;XM_013521414 XP_013376867;XP_013376868 MODEL 39131695 rrna 5S_rRNA 5S ribosomal RNA 8824021 protein-coding Birc6 baculoviral IAP repeat containing 6 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN labyrinthine layer development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH adrenocortical carcinoma (ortholog); autism spectrum disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955441 740299 923920 + 102009992 AGCD01036733;AGCD01036734;AGCD01036735;AGCD01036736;AGCD01036737;AGCD01036738;AGCD01036739;AGCD01036740;GBDF01124876;XM_013517560;XM_013517561 XP_013373014;XP_013373015 MODEL 8986391 protein-coding Dzip3 DAZ interacting zinc finger protein 3 ENCODES a protein that exhibits phosphatase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); RNA binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); FOUND IN cytoplasm (ortholog) NW_004955427 9481196 9571483 + 102017260 AGCD01027101;AGCD01027102;GBCQ01179483;XM_005386361;XM_013515123;XM_013515124;XM_013515125;XM_013515126;XM_013515127;XR_001234381 XP_005386418;XP_013370577;XP_013370578;XP_013370579;XP_013370580;XP_013370581 MODEL 10103913 protein-coding Iqcj IQ motif containing J NW_004955448 9937259 10186659 + 106149540 AGCD01041485;AGCD01041486;AGCD01041487;GBDF01122827;XM_013518667;XM_013518668;XM_013518669;XM_013518670;XM_013518671;XM_013518672;XM_013518673 XP_013374121;XP_013374122;XP_013374123;XP_013374124;XP_013374125;XP_013374126;XP_013374127 MODEL 8871428 pseudo LOC102017290 general transcription factor IIF subunit 2 pseudogene NW_004955402 9078429 9085971 + 102017290 AGCD01000204 MODEL 8916772 pseudo LOC102018056 deoxycytidine kinase pseudogene NW_004955452 6316449 6326634 - 102018056 AGCD01044102;AGCD01044103;AGCD01044104;AGCD01044105 MODEL 10353890 ncrna LOC106147109 uncharacterized LOC106147109 NW_004955520 2697649 2699840 + 106147109 AGCD01068082;XR_001231867 MODEL 8869956 ncrna LOC102024140 uncharacterized LOC102024140 NW_004955504 398960 407704 + 102024140 AGCD01064819;GBDK01412395;XR_001231548;XR_001231549;XR_264269 MODEL 8944149 protein-coding Wdr33 WD repeat domain 33 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955459 2740465 2841376 + 102022789 AGCD01048001;AGCD01048002;AGCD01048003;GBDF01081918;XM_005397576;XM_005397577;XM_005397580;XM_005397581;XM_005397582;XM_005397587;XM_005397588;XM_005397589;XM_013521041;XM_013521042;XM_013521044;XM_013521045;XM_013521046 XP_005397633;XP_005397634;XP_005397637;XP_005397638;XP_005397639;XP_005397644;XP_005397645;XP_005397646;XP_013376495;XP_013376496;XP_013376498;XP_013376499;XP_013376500 MODEL 8903857 ncrna LOC102005231 uncharacterized LOC102005231 NW_004955458 14978213 15025603 - 102005231 AGCD01047858;AGCD01047859;AGCD01047860;GBDF01226889;XR_001236482;XR_263001 MODEL 8837505 protein-coding Setd6 SET domain containing 6, protein lysine methyltransferase ENCODES a protein that exhibits NF-kappaB binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN peptidyl-lysine monomethylation (ortholog); regulation of inflammatory response (ortholog); stem cell differentiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 15934091 15937738 + 102012677 AGCD01031777;GBBH01050346;GBCQ01063968;XM_005388507 XP_005388564 MODEL 10282826 pseudo LOC106150087 small nuclear ribonucleoprotein E pseudogene NW_004955464 12331106 12331643 - 106150087 AGCD01050190 MODEL 9057404 pseudo LOC102019952 UMP-CMP kinase pseudogene NW_004955529 1375292 1375976 - 102019952 AGCD01069683 MODEL 8725278 protein-coding Kif21b kinesin family member 21B INVOLVED IN brain development (ortholog); corpus callosum development (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH lissencephaly (ortholog); long QT syndrome (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic endosome (ortholog) NW_004955406 37139168 37187543 - 102008285 AGCD01006571;GBDF01161913;XM_005375156;XM_005375158;XM_013522093;XR_001236847;XR_001236848;XR_001236849;XR_001236851;XR_001236852 XP_005375213;XP_005375215;XP_013377547 MODEL 8946994 protein-coding Asic1 acid sensing ion channel subunit 1 ENCODES a protein that exhibits monoatomic cation channel activity (ortholog); monoatomic ion channel activity (ortholog); monoatomic ion-gated channel activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral fear response (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); brain ischemia (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955547 635714 658541 + 102013877 AGCD01072170;AGCD01072171;GBDI01179653;XM_005411871;XM_005411872;XM_013508480;XM_013508481 XP_005411928;XP_005411929;XP_013363934;XP_013363935 MODEL 8977587 protein-coding Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN membrane organization (ortholog); FOUND IN cell-cell contact zone (ortholog); clathrin complex (ortholog); vesicle membrane (ortholog) NW_004955413 24406856 24430779 - 102009825 AGCD01014366;AGCD01014367;GBDF01089669;XM_013511544 XP_013366998 MODEL 9012668 protein-coding Ttc9 tetratricopeptide repeat domain 9 INVOLVED IN bone development (ortholog); ASSOCIATED WITH opiate dependence (ortholog) NW_004955523 4438674 4471049 - 102017694 AGCD01068646;AGCD01068647;GBDF01224632;XM_013507122 XP_013362576 MODEL 8705710 protein-coding LOC102005997 keratin-associated protein 20-2-like NW_004955407 30123405 30123560 + 102005997 AGCD01007628;XM_005375637 XP_005375694 MODEL 8893588 protein-coding LOC102007043 olfactory receptor 5W2-like NW_004955511 691641 692573 - 102007043 AGCD01066337;XM_005408207 XP_005408264 MODEL 8981138 protein-coding Plek pleckstrin ENCODES a protein that exhibits phosphatase activator activity (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cortical actin cytoskeleton organization (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); osteoporosis (ortholog); rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog); ruffle membrane (ortholog) NW_004955424 16494052 16524790 - 102022101 AGCD01024743;AGCD01024744;GBDK01147367;XM_005385668 XP_005385725 MODEL 8701722 protein-coding Chchd1 coiled-coil-helix-coiled-coil-helix domain containing 1 FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955437 18117090 18118586 - 102013006 AGCD01034774;GBDK01143051;XM_005389962 XP_005390019 MODEL 39134182 misc_rna 7SK 7SK RNA 8701161 protein-coding Hnmt histamine N-methyltransferase ENCODES a protein that exhibits histamine N-methyltransferase activity (ortholog); N-methyltransferase activity (ortholog); INVOLVED IN histamine catabolic process (ortholog); histamine metabolic process (ortholog); hyperosmotic response (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; homocysteine metabolic pathway; ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955440 5084198 5137577 + 102012366 AGCD01036271;GBDJ01186894;XM_005390770;XM_005390771;XM_005390772;XM_013517507;XM_013517508 XP_005390827;XP_005390828;XP_005390829;XP_013372961;XP_013372962 MODEL 9049626 protein-coding Ptger2 prostaglandin E receptor 2 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to prostaglandin E stimulus (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); asthma, nasal polyps, and aspirin intolerance (ortholog); FOUND IN plasma membrane (ortholog) NW_004955409 10760801 10775197 - 102010556 AGCD01009482;AGCD01009483;GBDJ01164140;XM_005376782;XM_005376783;XM_013510326;XM_013510327 XP_005376839;XP_005376840;XP_013365780;XP_013365781 MODEL 39132406 rrna 5S_rRNA 5S ribosomal RNA 9017453 protein-coding Atp6v0d1 ATPase H+ transporting V0 subunit d1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); lipodystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); centrosome (ortholog) NW_004955484 9167439 9206193 + 102030532 AGCD01058412;GBDF01047324;XM_005403648 XP_005403705 MODEL 39131696 rrna 5S_rRNA 5S ribosomal RNA 8989846 protein-coding Dnajb3 DnaJ heat shock protein family (Hsp40) member B3 FOUND IN acrosomal vesicle (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955453 2399155 2400158 + 102005993 AGCD01044626;GBDF01008616;XM_005395337 XP_005395394 MODEL 8781812 protein-coding Apoc2 apolipoprotein C2 ENCODES a protein that exhibits identical protein binding (ortholog); lipase inhibitor activity (ortholog); lipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); chylomicron remnant clearance (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Coronary Disease (ortholog); diabetes mellitus (ortholog); FOUND IN chylomicron (ortholog); extracellular space (ortholog); intermediate-density lipoprotein particle (ortholog) NW_004955555 2019547 2021543 + 102028689 AGCD01073125;GBCQ01062692;XM_005412482 XP_005412539 MODEL 8701884 pseudo LOC102022446 solute carrier family 25 member 46 pseudogene NW_004955402 17208998 17210219 + 102022446 AGCD01000500 MODEL 39134494 misc_rna 7SK 7SK RNA 8711184 protein-coding Hectd1 HECT domain E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN aorta development (ortholog); embryonic placenta development (ortholog); heart valve development (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955409 29373572 29470623 + 102012510 AGCD01010267;GBDJ01141199;XM_005376961 XP_005377018 MODEL 8772168 protein-coding Trpm6 transient receptor potential cation channel subfamily M member 6 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); magnesium ion transmembrane transport (ortholog); metal ion transport (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); Eye Abnormalities (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); nucleus (ortholog) NW_004955512 4179194 4323523 + 102006059 AGCD01066733;AGCD01066734;AGCD01066735;AGCD01066736;AGCD01066737;AGCD01066738;AGCD01066739;AGCD01066740;AGCD01066741;GBDJ01377962;XM_005408321;XM_013506547 XP_005408378;XP_013362001 MODEL 8792434 protein-coding Birc7 baculoviral IAP repeat containing 7 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH adrenocortical carcinoma (ortholog); bladder urothelial carcinoma (ortholog); breast carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955528 919246 922581 - 102010730 AGCD01069547;XM_013507431 XP_013362885 MODEL 8968262 protein-coding Tph1 tryptophan hydroxylase 1 ENCODES a protein that exhibits tryptophan 5-monooxygenase activity (ortholog); INVOLVED IN bone remodeling (ortholog); circadian rhythm (ortholog); mammary gland alveolus development (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytoplasm (ortholog) NW_004955414 32803417 32828682 - 102014235 AGCD01015783;XM_005380396;XM_013511753;XM_013511754 XP_005380453;XP_013367207;XP_013367208 MODEL 9021432 protein-coding LOC102019638 HLA class II histocompatibility antigen, DRB1-15 beta chain-like NW_004955437 1121086 1145720 - 102019638 AGCD01034190;GBBH01035303;XM_005389450 XP_005389507 MODEL 8701449 protein-coding Adam9 ADAM metallopeptidase domain 9 ENCODES a protein that exhibits collagen binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cervix uteri carcinoma in situ (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955463 14545425 14646498 + 102029159 AGCD01049912;AGCD01049913;AGCD01049914;GBCB01026114;XM_005398463 XP_005398520 MODEL 9037363 protein-coding Gpatch2l G-patch domain containing 2 like NW_004955438 214882 263937 + 102028233 AGCD01034942;GBDF01024623;XM_005390151;XM_005390152;XM_005390153 XP_005390208;XP_005390209;XP_005390210 MODEL 8982202 pseudo LOC102003512 60S ribosomal protein L17-like NW_004955405 31689835 31691569 + 102003512 AGCD01005302 MODEL 8896440 protein-coding Pdia4 protein disulfide isomerase family A member 4 ENCODES a protein that exhibits integrin binding (ortholog); protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); platelet aggregation (ortholog); positive regulation of protein folding (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) NW_004955491 4344874 4360205 - 102010172 AGCD01060429;AGCD01060430;GBDJ01020910;XM_005404741 XP_005404798 MODEL 9029465 ncrna LOC102010821 uncharacterized LOC102010821 NW_004955505 3545137 3556925 + 102010821 AGCD01065031;GBBH01131759;XR_264306 MODEL 8770459 protein-coding LOC102015045 vomeronasal type-2 receptor 116-like NW_004955524 3841707 3894579 - 102015045 AGCD01068931;AGCD01068932;AGCD01068933;AGCD01068934;AGCD01068935;AGCD01068936;XM_013507202 XP_013362656 MODEL 39132897 snrna U1 U1 spliceosomal RNA 39132353 snrna U6 U6 spliceosomal RNA 8710547 ncrna LOC102012427 uncharacterized LOC102012427 NW_004955479 4854411 4862694 - 102012427 AGCD01056335;AGCD01056336;GBDF01305284;XR_001230876 MODEL 39133325 snrna U4 U4 spliceosomal RNA 8810376 protein-coding Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955451 3751229 3799651 - 102006861 AGCD01043071;AGCD01043072;GBBH01069797;GBDF01048584;XM_013519210 XP_013374664 MODEL 8986111 protein-coding LOC102010825 olfactory receptor 4D6 NW_004955511 3967106 3968050 + 102010825 AGCD01066484;XM_005408062 XP_005408119 MODEL 8882215 pseudo LOC102021449 pyrethroid hydrolase Ces2e-like NW_004955484 9684942 9693526 - 102021449 AGCD01058425 MODEL 39131532 protein-coding HNRNPA0 heteroous nuclear ribonucleoprotein A0 8823183 pseudo LOC102005232 keratinocyte-associated protein 2-like NW_004955458 7970440 7970901 - 102005232 AGCD01047597 MODEL 8929377 protein-coding Wdr35 WD repeat domain 35 INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); connective tissue disease (ortholog); cranioectodermal dysplasia (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955469 2484972 2546562 - 102011643 AGCD01052277;GBBH01005246;XM_005400340 XP_005400397 MODEL 8836600 protein-coding Rfc4 replication factor C subunit 4 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); MORIMOTO-RYU-MALICDAN NEUROMUSCULAR SYNDROME (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); Elg1 RFC-like complex (ortholog) NW_004955420 20948549 20967845 + 102028973 AGCD01021114;AGCD01021115;AGCD01021116;AGCD01021117;GBBH01051801;XM_005383263 XP_005383320 MODEL 8798923 protein-coding Casq2 calsequestrin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sequestering activity (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to caffeine (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiac Arrhythmias (ortholog); Cardiac Conduction Defect (ortholog); FOUND IN cytoplasm (ortholog); junctional membrane complex (ortholog); sarcoplasmic reticulum (ortholog) NW_004955435 18941975 18996027 - 102027564 AGCD01033415;AGCD01033416;AGCD01033417;GBCB01099901;XM_005389033 XP_005389090 MODEL 8743051 protein-coding Setd7 SET domain containing 7, histone lysine methyltransferase ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); DNA damage response (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cognitive disorder (ortholog); extrahepatic cholestasis (ortholog); fetal alcohol spectrum disorder (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955428 4131431 4178250 + 102017588 AGCD01027667;AGCD01027668;GBCE01001559;XM_005386687 XP_005386744 MODEL 8958354 protein-coding Trit1 tRNA isopentenyltransferase 1 ENCODES a protein that exhibits tRNA dimethylallyltransferase activity (ortholog); INVOLVED IN mitochondrial tRNA modification (ortholog); tRNA modification (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 35 (ortholog); generalized epilepsy (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955452 17330446 17378579 - 102029821 AGCD01044550;AGCD01044551;AGCD01044552;GBDK01277036;XM_005395267;XM_005395268;XM_013519693 XP_005395324;XP_005395325;XP_013375147 MODEL 39133919 misc_rna 7SK 7SK RNA 8836403 ncrna LOC102019644 uncharacterized LOC102019644 NW_004955441 14802468 14824681 - 102019644 AGCD01037222;AGCD01037223;AGCD01037224;GBCB01060978;XR_262082 MODEL 8987126 protein-coding Ttc9b tetratricopeptide repeat domain 9B NW_004955578 1014670 1018120 + 102018664 AGCD01075504;GBBH01021853;XM_005414071 XP_005414128 MODEL 8906986 protein-coding Kif22 kinesin family member 22 INVOLVED IN metaphase chromosome alignment (ortholog); mitotic metaphase chromosome alignment (ortholog); sister chromatid cohesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); spondylocostal dysostosis 5 (ortholog); FOUND IN chromatin (ortholog); mitotic spindle (ortholog); nuclear speck (ortholog) NW_004955493 7155307 7173576 - 102008119 AGCD01061157;GBDJ01025840;XM_013504774 XP_013360228 MODEL 8780199 protein-coding Tiam2 TIAM Rac1 associated GEF 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955439 6942702 7147145 - 102019737 AGCD01035762;AGCD01035763;GBDJ01185825;XM_005390545;XM_005390546;XM_005390547;XM_013517329;XM_013517330 XP_005390602;XP_005390603;XP_005390604;XP_013372783;XP_013372784 MODEL 8857378 protein-coding E2f1 E2F transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anoikis (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear chromosome (ortholog) NW_004955422 27638625 27643261 + 102003151 AGCD01023330;GBDF01187864;XM_013513814 XP_013369268 MODEL 8776544 protein-coding LOC102017292 PRAME family member 12-like NW_004955664 6621 10072 + 102017292 AGCD01077903;XM_005415066 XP_005415123 MODEL 39131383 protein-coding PTGER3 prostaglandin E receptor 3 8716171 protein-coding Iqck IQ motif containing K ASSOCIATED WITH Alzheimer's disease (ortholog) NW_004955442 3428245 3548718 + 102011363 AGCD01037506;AGCD01037507;GBDF01043787;XM_005391117 XP_005391174 MODEL 8763029 protein-coding Plek2 pleckstrin 2 ENCODES a protein that exhibits phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell projection organization (ortholog); positive regulation of plasma membrane bounded cell projection assembly (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955466 2818004 2836688 + 102016362 AGCD01050765;AGCD01050766;AGCD01050767;AGCD01050768;GBDF01147329;XM_005399083 XP_005399140 MODEL 9038631 pseudo LOC102024142 TATA box-binding protein-associated factor RNA polymerase I subunit D pseudogene NW_004955505 4170938 4174564 - 102024142 AGCD01065092 MODEL 8902207 protein-coding Atp6v0d2 ATPase H+ transporting V0 subunit d2 ASSOCIATED WITH ovarian cyst (ortholog); Stomach Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955417 3778587 3832973 + 102005253 AGCD01017925;AGCD01017926;GBDF01042563;XM_013512849;XM_013512850;XM_013512851;XM_013512852 XP_013368303;XP_013368304;XP_013368305;XP_013368306 MODEL 8825322 protein-coding Alg10 ALG10 alpha-1,2-glucosyltransferase INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH long QT syndrome 2 (ortholog) NW_004955505 1844005 1854229 - 102004837 AGCD01064978;GBDJ01260417;XM_005407110 XP_005407167 MODEL 8815043 protein-coding Fam43b family with sequence similarity 43 member B NW_004955452 1102342 1104346 + 102010665 AGCD01043830;AGCD01043831;GBCQ01065920;XM_013519672 XP_013375126 MODEL 9043529 protein-coding Trpm7 transient receptor potential cation channel subfamily M member 7 ENCODES a protein that exhibits actin binding (ortholog); calcium channel activity (ortholog); kinase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH adenoma (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis-parkinsonism/dementia complex 1 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); neuronal cell body (ortholog); nucleus (ortholog) NW_004955409 3690722 3787139 + 102028060 AGCD01009259;AGCD01009260;GBDF01237858;XM_005376661;XM_005376664;XM_005376665 XP_005376718;XP_005376721;XP_005376722 MODEL 8716929 protein-coding LOC102019954 DLA class II histocompatibility antigen, DR-1 beta chain-like NW_004955437 1153576 1167424 - 102019954 AGCD01034190;GBDI01262878;XM_005389451;XM_013517127;XM_013517128 XP_005389508;XP_013372581;XP_013372582 MODEL 9055335 protein-coding Fis1 fission, mitochondrial 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to lipid (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); chronic kidney disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); peroxisomal membrane (ortholog) NW_004955456 16057158 16060623 + 102022568 AGCD01046686;GBBH01162039;XM_005396858 XP_005396915 MODEL 8710498 pseudo LOC102007044 nucleolar GTP-binding protein 2 pseudogene NW_004955430 12703634 12705804 - 102007044 AGCD01029509 MODEL 39134183 misc_rna 7SK 7SK RNA 9035347 protein-coding Setd9 SET domain containing 9 ASSOCIATED WITH Ependymomas (ortholog); FOUND IN mitochondrion (ortholog) NW_004955446 10994388 11004034 - 102013459 AGCD01040194;GBDF01050852;GBDF01050854;XM_013518469 XP_013373923 MODEL 39132354 snrna U6 U6 spliceosomal RNA 8704500 ncrna LOC102018063 uncharacterized LOC102018063 NW_004955460 12992444 12996471 - 102018063 AGCD01048666;GBDK01027678;XR_001236498;XR_001236499 MODEL 10234104 ncrna LOC106147110 uncharacterized LOC106147110 NW_004955520 2750271 2755313 - 106147110 AGCD01068082;XR_001231868 MODEL 39134495 misc_rna 7SK 7SK RNA 9039915 protein-coding Dnajb4 DnaJ heat shock protein family (Hsp40) member B4 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-folding chaperone binding (ortholog); ASSOCIATED WITH congenital myopathy 21 (ortholog); distal myopathy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955423 15212579 15245538 - 102017031 AGCD01023799;AGCD01023800;GBDJ01050466;XM_005385208;XM_005385209;XM_005385210;XM_005385211;XM_005385212;XM_013514427 XP_005385265;XP_005385266;XP_005385267;XP_005385268;XP_005385269;XP_013369881 MODEL 8811354 protein-coding Hectd2 HECT domain E3 ubiquitin protein ligase 2 NW_004955425 1720634 1771681 - 102015329 AGCD01025238;GBDF01159582;XM_005386086 XP_005386143 MODEL 8717066 protein-coding Kif23 kinesin family member 23 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); congenital dyserythropoietic anemia type IIIa (ortholog); COVID-19 (ortholog); FOUND IN centralspindlin complex (ortholog); centrosome (ortholog); Flemming body (ortholog) NW_004955450 7060240 7083818 - 102004769 AGCD01042531;AGCD01042532;GBDF01086111;XM_005393877;XM_013519019;XM_013519020;XM_013519021 XP_005393934;XP_013374473;XP_013374474;XP_013374475 MODEL 8780899 protein-coding Aff1 ALF transcription elongation factor 1 INVOLVED IN positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH teratoma (ortholog); FOUND IN nucleus (ortholog); transcription elongation factor complex (ortholog) NW_004955474 2748438 2899094 - 102017448 AGCD01054303;AGCD01054304;AGCD01054305;AGCD01054306;AGCD01054307;AGCD01054308;GBBH01077473;XM_005401342;XM_013502745;XM_013502746 XP_005401399;XP_013358199;XP_013358200 MODEL 8923251 protein-coding Tph2 tryptophan hydroxylase 2 ENCODES a protein that exhibits tryptophan 5-monooxygenase activity (ortholog); INVOLVED IN cellular response to lithium ion (ortholog); circadian rhythm (ortholog); response to activity (ortholog); ASSOCIATED WITH acute stress disorder (ortholog); alcohol use disorder (ortholog); amphetamine abuse (ortholog); FOUND IN axon (ortholog); neuron projection (ortholog); neuronal cell body (ortholog) NW_004955405 11877474 11981035 + 102005552 AGCD01004844;GBDI01275596;XM_005374324;XM_013517642;XM_013517643;XM_013517645 XP_005374381;XP_013373096;XP_013373097;XP_013373099 MODEL 8812122 protein-coding Adamdec1 ADAM like decysin 1 INVOLVED IN cell differentiation (ortholog); extracellular matrix organization (ortholog); inflammatory response (ortholog) NW_004955403 47421102 47439501 + 102016876 AGCD01002889;GBDF01074355;XM_005373906 XP_005373963 MODEL 8841428 ncrna LOC102010025 uncharacterized LOC102010025 NW_004955407 17318652 17322814 + 102010025 AGCD01007247;GBDF01021440;XR_259568 MODEL 8755411 protein-coding Ptger3 prostaglandin E receptor 3 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bicarbonate transport (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN brush border membrane (ortholog); cell surface (ortholog); neuronal cell body (ortholog) NW_004955423 21096926 21164435 + 102004944 AGCD01023935;GBDF01208544;XM_005385244 XP_005385301 MODEL 39132900 snrna U1 U1 spliceosomal RNA 8756566 protein-coding Gpatch3 G-patch domain containing 3 INVOLVED IN negative regulation of RIG-I signaling pathway (ortholog); negative regulation of type I interferon production (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955452 6234241 6241949 - 102025075 AGCD01044098;GBDJ01029793;XM_005394885 XP_005394942 MODEL 8806762 ncrna LOC102015050 uncharacterized LOC102015050 NW_004955439 4385632 4388191 + 102015050 AGCD01035708;GBDI01314368;XR_261970 MODEL 8849679 ncrna LOC102006000 uncharacterized LOC102006000 NW_004955408 27481149 27486049 + 102006000 AGCD01008679;GBDF01076903;XR_259721 MODEL 8811802 protein-coding Asic2 acid sensing ion channel subunit 2 ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to xenobiotic stimulus (ortholog); detection of mechanical stimulus involved in sensory perception (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Inflammation (ortholog); prostate cancer (ortholog); FOUND IN dendritic spine (ortholog); membrane (ortholog); neuron projection (ortholog) NW_004955481 7850730 8093255 - 102030422 AGCD01057078;AGCD01057079;AGCD01057080;GBBH01205767;GBDJ01044546;XM_005402835 XP_005402892 MODEL 8928511 protein-coding Baiap3 BAI1 associated protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); phospholipid binding (ortholog); SNARE binding (ortholog); INVOLVED IN dense core granule maturation (ortholog); G protein-coupled receptor signaling pathway (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN cytosol (ortholog); dense core granule (ortholog); early endosome membrane (ortholog) NW_004955442 15884034 15897894 - 102006961 AGCD01037884;GBDI01166935;XM_005391574;XM_013517830 XP_005391631;XP_013373284 MODEL 8967547 protein-coding Wdr36 WD repeat domain 36 INVOLVED IN regulation of axon extension (ortholog); retina homeostasis (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH asthma (ortholog); glaucoma (ortholog); Glaucoma 1, Open Angle, G (ortholog); FOUND IN small-subunit processome (ortholog) NW_004955418 3988073 4023425 - 102017017 AGCD01018806;AGCD01018807;GBDK01006850;XM_005382167;XM_013513044 XP_005382224;XP_013368498 MODEL 9024177 protein-coding Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 INVOLVED IN inner mitochondrial membrane organization (ortholog); mitochondrial membrane organization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); frontotemporal dementia and/or amyotrophic lateral sclerosis 2 (ortholog); genetic disease (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955455 8472833 8474745 + 102013475 AGCD01045896;GBCQ01010321;XM_005396426 XP_005396483 MODEL 8721119 ncrna LOC102012428 uncharacterized LOC102012428 NW_004955417 7483800 7490830 + 102012428 AGCD01018005;AGCD01018006;GBDF01137161;XR_260463 MODEL 39132408 rrna 5S_rRNA 5S ribosomal RNA 8801468 protein-coding Apoc3 apolipoprotein C3 ENCODES a protein that exhibits high-density lipoprotein particle receptor binding (ortholog); lipase inhibitor activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH apolipoprotein C-III deficiency (ortholog); breast cancer (ortholog); cardiovascular system disease (ortholog); FOUND IN chylomicron (ortholog); extracellular space (ortholog); intermediate-density lipoprotein particle (ortholog) NW_004955412 18165667 18168015 + 102021864 AGCD01012927;GBCQ01006025;XM_005378187 XP_005378244 MODEL 8885611 protein-coding LOC102010827 olfactory receptor 10V1 NW_004955511 4140948 4141914 - 102010827 AGCD01066493;XM_005408271 XP_005408328 MODEL 8971978 protein-coding LOC102022449 zinc finger protein 709-like NW_004955626 47966 58915 + 102022449 AGCD01077462;AGCD01077463;GBDF01184976;XM_013510163 XP_013365617 MODEL 9036266 ncrna LOC102018066 uncharacterized LOC102018066 NW_004955411 12009836 12011426 - 102018066 AGCD01011835;GBDF01078244;XR_259933 MODEL 10328039 ncrna LOC106150088 uncharacterized LOC106150088 NW_004955464 12757850 12758796 + 106150088 AGCD01050223;GBBH01181151;XR_001236690 MODEL 8909775 protein-coding Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); protein kinase binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); inflammatory response (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH gastric adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); synapse (ortholog) NW_004955408 32718736 32719409 - 102016132 AGCD01008853;GBDF01010779;XM_013507545 XP_013362999 MODEL 8828251 protein-coding E2f2 E2F transcription factor 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); lens fiber cell apoptotic process (ortholog); negative regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Disease Progression (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955452 3498077 3518033 - 102016226 AGCD01043927;AGCD01043928;GBBH01166880;XM_005394765;XM_005394766 XP_005394822;XP_005394823 MODEL 9068109 protein-coding Pdia5 protein disulfide isomerase family A member 5 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH COVID-19 (ortholog) NW_004955427 22268730 22356123 + 102013954 AGCD01027465;GBDF01014374;XM_005386524 XP_005386581 MODEL 8999372 ncrna LOC102005233 uncharacterized LOC102005233 NW_004955460 10800696 10803686 + 102005233 AGCD01048610;XR_001236511;XR_263052 MODEL 8752072 protein-coding Atp6v0e1 ATPase H+ transporting V0 subunit e1 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); response to amino acid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog) NW_004955408 25667703 25703550 + 102028164 AGCD01008649;AGCD01008650;AGCD01008651;GBBH01001756;XM_005376345 XP_005376402 MODEL 9014846 protein-coding Rfc5 replication factor C subunit 5 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog) NW_004955455 13325912 13337241 - 102020758 AGCD01046069;GBDF01300839;XM_005396539 XP_005396596 MODEL 39133920 misc_rna 7SK 7SK RNA 8808982 protein-coding Hectd3 HECT domain E3 ubiquitin protein ligase 3 ENCODES a protein that exhibits syntaxin binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955464 13230534 13238953 + 102006009 AGCD01050265;GBCB01061479;GBDJ01189042;XM_005398789;XM_013521723 XP_005398846;XP_013377177 MODEL 39131697 rrna 5S_rRNA 5S ribosomal RNA 8935194 protein-coding Casr calcium sensing receptor ENCODES a protein that exhibits amino acid binding (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); bile acid secretion (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; E-cadherin signaling pathway; G protein mediated signaling pathway via Galpha12/Galpha13 family; ASSOCIATED WITH Albuminuria (ortholog); atherosclerosis (ortholog); autosomal dominant hypocalcemia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955427 21486608 21574017 + 102008556 AGCD01027445;AGCD01027446;AGCD01027447;AGCD01027448;AGCD01027449;AGCD01027450;GBDI01089889;XM_005386506;XM_013515042 XP_005386563;XP_013370496 MODEL 8791362 pseudo LOC102019647 dnaJ homolog subfamily B member 6-like NW_004955552 1386778 1387533 + 102019647 AGCD01072771;XR_264925 MODEL 8889751 protein-coding Fitm1 fat storage inducing transmembrane protein 1 ENCODES a protein that exhibits diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955409 36267121 36268462 - 102011845 AGCD01010454;GBDK01305527;XM_005377045 XP_005377102 MODEL 8878724 protein-coding Ttc9c tetratricopeptide repeat domain 9C ASSOCIATED WITH Prostatic Neoplasms (ortholog) NW_004955599 481717 488678 - 102010651 AGCD01076651;AGCD01076652;GBBH01141536;GBDF01278020;XM_013510052 XP_013365506 MODEL 8937783 protein-coding Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); glycerophosphoinositol inositolphosphodiesterase activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN actin filament organization (ortholog); GPI anchor metabolic process (ortholog); negative regulation of oligodendrocyte progenitor proliferation (ortholog); FOUND IN actin filament (ortholog); basolateral plasma membrane (ortholog); lamellipodium (ortholog) NW_004955475 9972797 9983145 + 102023802 AGCD01055079;GBBH01062185;XM_005401622;XM_005401623;XM_005401625;XM_005401626;XM_013502885 XP_005401679;XP_005401680;XP_005401682;XP_005401683;XP_013358339 MODEL 8830066 pseudo LOC102021450 40S ribosomal protein S24 pseudogene NW_004955420 610075 610467 - 102021450 AGCD01020550 MODEL 9029470 pseudo LOC102012430 39S ribosomal protein L21, mitochondrial pseudogene NW_004955417 9985249 9986014 + 102012430 AGCD01018063 MODEL 10283854 protein-coding LOC106147111 uncharacterized LOC106147111 NW_004955520 2113587 2140566 + 106147111 AGCD01068076;XM_013507019 XP_013362473 MODEL 8767931 protein-coding Plekha1 pleckstrin homology domain containing A1 ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); B cell receptor signaling pathway (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955477 659640 730394 + 102020112 AGCD01055492;AGCD01055493;AGCD01055494;GBDF01226547;XM_005401937;XM_005401939;XM_005401940;XM_005401941;XM_005401942;XM_005401943;XM_005401945;XM_013503083;XM_013503084 XP_005401994;XP_005401996;XP_005401997;XP_005401998;XP_005401999;XP_005402000;XP_005402002;XP_013358537;XP_013358538 MODEL 8735794 protein-coding Dnajb5 DnaJ heat shock protein family (Hsp40) member B5 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); response to unfolded protein (ortholog); ASSOCIATED WITH myopathy (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955472 1168568 1177849 - 102016468 AGCD01053378;GBBH01050211;GBCB01001318;XM_013523026 XP_013378480 MODEL 8888610 protein-coding Fam50a family with sequence similarity 50 member A INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH Armfield syndrome (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955580 941620 947763 + 102003920 AGCD01075630;AGCD01075631;GBCB01038185;XM_005414202 XP_005414259 MODEL 8990611 protein-coding Trpm8 transient receptor potential cation channel subfamily M member 8 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH migraine (ortholog); migraine without aura (ortholog); FOUND IN external side of plasma membrane (ortholog); membrane (ortholog); membrane raft (ortholog) NW_004955453 2185534 2265261 - 102004035 AGCD01044623;AGCD01044624;GBDF01103492;XM_005395332 XP_005395389 MODEL 8791026 protein-coding Tpi1 triosephosphate isomerase 1 ENCODES a protein that exhibits isomerase activity (ortholog); protein homodimerization activity (ortholog); triose-phosphate isomerase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); carbohydrate metabolic disorder (ortholog); FOUND IN cytosol (ortholog) NW_004955413 4467615 4471594 + 102005919 AGCD01013617;GBDF01008105;XM_005378838 XP_005378895 MODEL 39134184 misc_rna 7SK 7SK RNA 8984424 pseudo LOC102007046 protein SET-like NW_004955515 1700873 1701654 - 102007046 AGCD01067233 MODEL 8887219 ncrna LOC102017296 uncharacterized LOC102017296 NW_004955452 3581408 3586059 - 102017296 AGCD01043931;GBDF01144605;XR_262645 MODEL 8758715 protein-coding Gpatch4 G-patch domain containing 4 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog) NW_004955545 2684827 2694733 - 102004204 AGCD01071916;AGCD01071917;GBDI01278863;XM_005411685;XM_005411687 XP_005411742;XP_005411744 MODEL 9038826 protein-coding Ticam1 toll like receptor adaptor molecule 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Herpes Simplex Encephalitis (ortholog); Herpes Simplex Encephalitis 4 (ortholog); pneumoconiosis (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955495 4197083 4204999 + 102004084 AGCD01061902;GBDI01013112;XM_005405780;XM_005405782 XP_005405837;XP_005405839 MODEL 39132355 snrna U6 U6 spliceosomal RNA 8713794 pseudo LOC102003513 UDP-glucuronosyltransferase 1-8-like NW_004955453 2600059 2624326 - 102003513 AGCD01044634 MODEL 8891627 protein-coding Iqcm IQ motif containing M NW_004955471 4250345 4645729 - 102018715 AGCD01053071;AGCD01053072;AGCD01053073;AGCD01053074;AGCD01053075;AGCD01053076;AGCD01053077;AGCD01053078;AGCD01053079;AGCD01053080;AGCD01053081;AGCD01053082;AGCD01053083;AGCD01053084;GBDF01127836;XM_005400877;XM_005400878;XM_005400879;XM_005400880;XM_013522868;XM_013522869 XP_005400934;XP_005400935;XP_005400936;XP_005400937;XP_013378322;XP_013378323 MODEL 9000283 protein-coding Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone H3K14ac reader activity (ortholog); INVOLVED IN bone development (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); gene expression (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); high grade glioma (ortholog); Huntington's disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955588 290497 338438 + 102017932 AGCD01076102;AGCD01076103;AGCD01076104;AGCD01076105;GBDF01085935;XM_005414466;XM_005414467;XM_005414468;XM_005414469;XM_013509910;XM_013509911 XP_005414523;XP_005414524;XP_005414525;XP_005414526;XP_013365364;XP_013365365 MODEL 8740709 pseudo LOC102024147 laccase domain-containing protein 1-like NW_004955509 6401840 6403071 + 102024147 AGCD01066121 MODEL 39133326 snrna U4 U4 spliceosomal RNA 8991736 ncrna LOC102018069 uncharacterized LOC102018069 NW_004955412 17652061 17663017 - 102018069 AGCD01012916;GBDF01083884;XR_001232864 MODEL 9059477 protein-coding Trmo tRNA methyltransferase O ENCODES a protein that exhibits tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog) NW_004955419 27553040 27568417 + 102020012 AGCD01020441;GBCQ01059248;XM_013513222;XM_013513223 XP_013368676;XP_013368677 MODEL 8943084 protein-coding Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phosphatidylcholine catabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); Neurodevelopmental Disorders (ortholog); spondylocostal dysostosis 5 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955493 6876943 6883716 + 102021563 AGCD01061147;GBCE01188319;XM_005405185 XP_005405242 MODEL 8880585 pseudo LOC102010026 transmembrane protein 50A pseudogene NW_004955455 8395596 8396361 - 102010026 AGCD01045888 MODEL 8980950 ncrna LOC102012432 uncharacterized LOC102012432 NW_004955418 28369715 28371889 + 102012432 AGCD01019436;GBDF01147816;XR_260592 MODEL 8904732 protein-coding Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ENCODES a protein that exhibits heparin binding (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN cellular response to parathyroid hormone stimulus (ortholog); cellular response to prostaglandin E stimulus (ortholog); cellular response to vitamin D (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN basement membrane (ortholog); cytoplasmic vesicle (ortholog); extracellular matrix (ortholog) NW_004955407 26524487 26533038 - 102021627 AGCD01007530;GBDJ01129838;XM_005375601 XP_005375658 MODEL 8884148 protein-coding LOC102019955 olfactory receptor 2A12-like NW_004955537 2688342 2689280 + 102019955 AGCD01070934;XM_005410630 XP_005410687 MODEL 8994193 protein-coding LOC102015054 olfactory receptor 4K1 NW_004955550 455075 456010 - 102015054 AGCD01072505;XM_005412032 XP_005412089 MODEL 8990685 ncrna LOC102006003 uncharacterized LOC102006003 NW_004955409 4395307 4403847 + 102006003 AGCD01009288;XR_259753 MODEL 8908039 protein-coding Plekha2 pleckstrin homology domain containing A2 ENCODES a protein that exhibits fibronectin binding (ortholog); laminin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of cell-matrix adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN cytoplasm (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955463 14462875 14525174 + 102027500 AGCD01049910;AGCD01049911;GBCE01011414;XM_005398458;XM_005398460;XM_005398461;XM_013521516;XM_013521517 XP_005398515;XP_005398517;XP_005398518;XP_013376970;XP_013376971 MODEL 8910607 protein-coding Atp6v0e2 ATPase H+ transporting V0 subunit e2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); synaptic vesicle lumen acidification (ortholog); FOUND IN synaptic vesicle membrane (ortholog) NW_004955491 4929405 4935247 + 102017780 AGCD01060465;GBDJ01237248;XM_005404765 XP_005404822 MODEL 8838746 protein-coding Bivm basic, immunoglobulin-like variable motif containing FOUND IN nucleoplasm (ortholog) NW_004955404 8327295 8358453 - 102028925 AGCD01003350;AGCD01003351;GBDI01324218;XM_005374026;XM_005374027;XM_013515915 XP_005374083;XP_005374084;XP_013371369 MODEL 8944343 protein-coding Asic3 acid sensing ion channel subunit 3 ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion-gated channel activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of pain (ortholog); detection of mechanical stimulus involved in sensory perception (ortholog); ASSOCIATED WITH Inflammation (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955491 5487788 5491562 + 102029189 AGCD01060484;GBDI01243786;XM_005404806;XM_005404807;XM_013504583;XM_013504584;XM_013504585 XP_005404863;XP_005404864;XP_013360037;XP_013360038;XP_013360039 MODEL 39132414 rrna 5S_rRNA 5S ribosomal RNA 39134496 misc_rna 7SK 7SK RNA 8989111 protein-coding Cass4 Cas scaffold protein family member 4 ENCODES a protein that exhibits protein tyrosine kinase binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of protein tyrosine kinase activity (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog) NW_004955445 2771130 2809815 - 102009663 AGCD01039365;AGCD01039366;AGCD01039367;GBDK01232305;XM_005392268 XP_005392325 MODEL 9050685 protein-coding Wdr37 WD repeat domain 37 INVOLVED IN corpus callosum development (ortholog); lymphocyte homeostasis (ortholog); ASSOCIATED WITH cerebellar hypoplasia (ortholog); coloboma (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955421 30097046 30161762 - 102023043 AGCD01022380;AGCD01022381;AGCD01022382;GBDF01221568;XM_005383910;XM_013513754;XM_013513755;XM_013513756;XM_013513758;XM_013513759 XP_005383967;XP_013369208;XP_013369209;XP_013369210;XP_013369212;XP_013369213 MODEL 8979584 protein-coding Ttf1 transcription termination factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); termination of RNA polymerase I transcription (ortholog); transcription by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH congenital nongoitrous hypothyroidism 2 (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); lung adenocarcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955513 1804690 1829705 - 102026901 AGCD01066863;AGCD01066864;GBBH01172105;XM_005408379;XM_013506712;XM_013506713;XR_001231751;XR_001231752;XR_001231753 XP_005408436;XP_013362166;XP_013362167 MODEL 8735823 ncrna LOC102017298 uncharacterized LOC102017298 NW_004955405 17228378 17321976 + 102017298 AGCD01004987;AGCD01004988;AGCD01004989;AGCD01004990;AGCD01004991;AGCD01004992;GBDI01384696;XR_001235388;XR_001235389;XR_001235390;XR_001235391;XR_001235392;XR_001235393;XR_259384 MODEL 8917974 protein-coding Ticam2 toll like receptor adaptor molecule 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to virus (ortholog); negative regulation of chemokine (C-C motif) ligand 5 production (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); Coronavirus infectious disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) NW_004955411 31010373 31042321 - 102003848 AGCD01012265;GBDJ01125148;XM_013510720 XP_013366174 MODEL 8701629 protein-coding Alg11 ALG11 alpha-1,2-mannosyltransferase ENCODES a protein that exhibits GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ip (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955431 5297477 5320653 + 102007144 AGCD01030019;GBDF01195619;XM_005387615;XM_005387616;XM_013515772;XM_013515773;XR_001234601 XP_005387672;XP_005387673;XP_013371226;XP_013371227 MODEL 9001066 protein-coding Aff2 ALF transcription elongation factor 2 ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of gene expression (ortholog); nuclear speck organization (ortholog); ASSOCIATED WITH Dwarfism (ortholog); fragile X syndrome (ortholog); genetic disease (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955498 1012323 1497031 + 102020584 AGCD01062737;AGCD01062738;AGCD01062739;AGCD01062740;AGCD01062741;AGCD01062742;AGCD01062743;AGCD01062744;GBBH01113542;XM_005406396 XP_005406453 MODEL 9030277 protein-coding Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ENCODES a protein that exhibits DNA binding (ortholog); DNA/DNA annealing activity (ortholog); G-rich strand telomeric DNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 20 (ortholog); Animal Disease Models (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955458 1530163 1536874 + 102003094 AGCD01047188;AGCD01047189;AGCD01047190;GBDF01004157;XM_005397209;XM_005397210;XM_005397211;XM_013520944 XP_005397266;XP_005397267;XP_005397268;XP_013376398 MODEL 8861761 protein-coding Iqcn IQ motif containing N INVOLVED IN single fertilization (ortholog); sperm flagellum assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH spermatogenic failure 78 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955524 3181133 3195111 + 102020602 AGCD01068864;AGCD01068865;AGCD01068866;AGCD01068867;GBDF01002962;XM_013507314;XM_013507315;XM_013507316;XM_013507317;XM_013507318 XP_013362768;XP_013362769;XP_013362770;XP_013362771;XP_013362772 MODEL 9012143 protein-coding Ptger4 prostaglandin E receptor 4 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); allergic asthma (ortholog); Alzheimer's disease (ortholog); FOUND IN neuron projection terminus (ortholog); neuronal cell body (ortholog); nuclear membrane (ortholog) NW_004955426 24997811 25010822 + 102024139 AGCD01026701;GBDF01055599;XM_005386240 XP_005386297 MODEL 8858927 protein-coding LOC102024148 olfactory receptor 1020 NW_004955511 1745965 1747014 - 102024148 AGCD01066378;XM_005408241 XP_005408298 MODEL 9017579 protein-coding Bak1 BCL2 antagonist/killer 1 ENCODES a protein that exhibits BH domain binding (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); apoptotic process (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); ataxia telangiectasia (ortholog); FOUND IN BAK complex (ortholog); Bcl-2 family protein complex (ortholog); cytoplasm (ortholog) NW_004955437 2036415 2041997 - 102008887 AGCD01034255;GBBH01062496;XM_005389504;XM_005389505 XP_005389561;XP_005389562 MODEL 8754661 protein-coding Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of mitochondrial ATP synthesis coupled electron transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); Parkinson's disease 22 (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955456 8260533 8265488 - 102030499 AGCD01046465;GBDI01032492;XM_005396701 XP_005396758 MODEL 39131698 rrna 5S_rRNA 5S ribosomal RNA 8951259 protein-coding Hectd4 HECT domain E3 ubiquitin protein ligase 4 INVOLVED IN glucose homeostasis (ortholog); glucose metabolic process (ortholog); ASSOCIATED WITH alcohol-induced mental disorder (ortholog); autism spectrum disorder (ortholog); coronary artery disease (ortholog) NW_004955482 8714100 8847975 - 102008108 AGCD01057550;AGCD01057551;AGCD01057552;AGCD01057553;AGCD01057554;AGCD01057555;GBDI01138241;XM_005403190;XM_005403191;XM_005403193;XM_005403195;XM_013503686;XM_013503687;XM_013503689;XM_013503690 XP_005403247;XP_005403248;XP_005403250;XP_005403252;XP_013359140;XP_013359141;XP_013359143;XP_013359144 MODEL 8907821 protein-coding LOC102019656 SLAM family member 9-like NW_004955623 7603 114709 - 102019656 AGCD01077398;AGCD01077399;AGCD01077400;AGCD01077401;AGCD01077402;AGCD01077403;AGCD01077404;AGCD01077405;AGCD01077406;AGCD01077407;AGCD01077408;AGCD01077409;AGCD01077410;AGCD01077411;GBDJ01143899;GBDK01263692;XM_013510158 XP_013365612 MODEL 9017356 protein-coding Trps1 transcriptional repressor GATA binding 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); chondrocyte differentiation (ortholog); hair follicle development (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); bone development disease (ortholog); brachydactyly (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 21674545 21913137 - 102028191 AGCD01018402;AGCD01018403;AGCD01018404;AGCD01018405;AGCD01018406;GBCQ01151050;XM_005381890;XM_005381891;XM_005381893;XM_013512789;XM_013512790;XM_013512791;XM_013512792;XM_013512793 XP_005381947;XP_005381948;XP_005381950;XP_013368243;XP_013368244;XP_013368245;XP_013368246;XP_013368247 MODEL 10254371 protein-coding Apoc4 apolipoprotein C4 INVOLVED IN lipid storage (ortholog); triglyceride homeostasis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) NW_004955555 2018327 2018828 + 106147404 AGCD01073125;GBCB01035189;XM_013508676 XP_013364130 MODEL 8824582 pseudo LOC102007047 hippocampus abundant transcript-like protein 1 pseudogene NW_004955516 606224 607991 + 102007047 AGCD01067389 MODEL 8846931 protein-coding Kif24 kinesin family member 24 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); microtubule depolymerization (ortholog); negative regulation of cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy 3 (ortholog); neuropathy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) NW_004955472 1774850 1868525 + 102004062 AGCD01053411;AGCD01053412;AGCD01053413;GBDF01126396;XM_005401086;XM_005401087;XM_005401088;XM_005401089;XM_013522982;XM_013522984;XM_013522985;XM_013522986;XR_001237083;XR_001237084;XR_001237085 XP_005401143;XP_005401144;XP_005401145;XP_005401146;XP_013378436;XP_013378438;XP_013378439;XP_013378440 MODEL 8972043 protein-coding Plekha3 pleckstrin homology domain containing A3 ENCODES a protein that exhibits identical protein binding (ortholog); molecular carrier activity (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955403 18347309 18366503 - 102025747 AGCD01002097;GBCE01098308;GBDK01139966;XM_013512613 XP_013368067 MODEL 8793461 ncrna LOC102021452 uncharacterized LOC102021452 NW_004955420 19744171 19769843 + 102021452 AGCD01021066;GBDF01162139;XR_001233826;XR_260726 MODEL 9056910 protein-coding Asic4 acid sensing ion channel subunit family member 4 ENCODES a protein that exhibits pH-gated sodium channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog) NW_004955453 13937745 13961664 - 102030495 AGCD01044855;GBDI01164661;XM_005395514 XP_005395571 MODEL 10190715 protein-coding LOC106150089 uncharacterized LOC106150089 NW_004955464 4591900 4595081 - 106150089 AGCD01049992;GBDK01281559;XM_013521668;XM_013521669;XM_013521670;XR_001236691 XP_013377122;XP_013377123;XP_013377124 MODEL 8918043 protein-coding Gpatch8 G-patch domain containing 8 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN hemopoiesis (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 17395106 17463399 - 102007398 AGCD01043749;AGCD01043750;AGCD01043751;AGCD01043752;GBBH01164258;GBDF01085707;XM_013519264 XP_013374718 MODEL 8782665 pseudo LOC102005234 tRNA pseudouridine(38/39) synthase pseudogene NW_004955409 17845827 17846565 - 102005234 AGCD01009800 MODEL 9062424 ncrna LOC102018076 uncharacterized LOC102018076 NW_004955413 26991201 26996200 + 102018076 AGCD01014489;AGCD01014490;GBCB01118470;XR_260115 MODEL 8980186 protein-coding Pdia6 protein disulfide isomerase family A member 6 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN IRE1-mediated unfolded protein response (ortholog); negative regulation of IRE1-mediated unfolded protein response (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955487 5735698 5744601 - 102019178 AGCD01059345;GBBH01003820;GBCE01003954;XM_013504373 XP_013359827 MODEL 8929141 protein-coding Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 ENCODES a protein that exhibits ATPase activator activity (ortholog); DNA binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); chorio-allantoic fusion (ortholog); chorion development (ortholog); ASSOCIATED WITH autosomal dominant limb-girdle muscular dystrophy (ortholog); autosomal dominant limb-girdle muscular dystrophy type 1 (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955579 240058 298592 + 102030684 AGCD01075541;AGCD01075542;GBDI01021155;XM_005414100;XM_005414101 XP_005414157;XP_005414158 MODEL 39133921 misc_rna 7SK 7SK RNA 9068137 protein-coding Rfesd Rieske Fe-S domain containing NW_004955418 16897714 16900324 - 102015723 AGCD01019133;GBBH01113392;GBCB01057071;XM_013513067 XP_013368521 MODEL 9037569 protein-coding Gdpd4 glycerophosphodiester phosphodiesterase domain containing 4 NW_004955414 14471320 14564089 + 102010686 AGCD01015151;AGCD01015152;AGCD01015153;AGCD01015154;AGCD01015155;GBDF01002348;XM_005379839;XM_005379840 XP_005379896;XP_005379897 MODEL 9038066 protein-coding Tpk1 thiamin pyrophosphokinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); thiamine diphosphokinase activity (ortholog); UTP thiamine diphosphokinase activity (ortholog); INVOLVED IN regulation of pyruvate decarboxylation to acetyl-CoA (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine metabolic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); Thiamine Metabolism Dysfunction Syndrome 5 (Episodic Encephalopathy Type) (ortholog); FOUND IN cytosol (ortholog) NW_004955491 621941 968570 - 102006924 AGCD01060343;AGCD01060344;AGCD01060345;AGCD01060346;GBBH01166046;XM_005404730;XM_005404732;XM_013504637;XM_013504638;XM_013504639;XM_013504640 XP_005404787;XP_005404789;XP_013360091;XP_013360092;XP_013360093;XP_013360094 MODEL 9041710 ncrna LOC102010830 uncharacterized LOC102010830 NW_004955513 2631451 2640898 - 102010830 AGCD01066883;GBDF01209406;XR_264458 MODEL 8750208 protein-coding Ttf2 transcription termination factor 2 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); FOUND IN cytosol (ortholog) NW_004955435 20168842 20207999 + 102006160 AGCD01033447;GBBH01057701;XM_005389052 XP_005389109 MODEL 39134185 misc_rna 7SK 7SK RNA 8892963 protein-coding Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif 10 ASSOCIATED WITH genetic disease (ortholog); optic nerve disease (ortholog); primary open angle glaucoma (ortholog); FOUND IN extracellular matrix (ortholog); microfibril (ortholog) NW_004955563 861355 878633 + 102008780 AGCD01074094;GBCE01095643;GBDI01262621;XM_005413109 XP_005413166 MODEL 8721452 ncrna LOC102022450 uncharacterized LOC102022450 NW_004955403 48110321 48128265 - 102022450 AGCD01002914;GBDK01024559;XR_001234474;XR_259248 MODEL 8923205 ncrna LOC102003516 uncharacterized LOC102003516 NW_004955456 14326450 14331839 - 102003516 AGCD01046639;GBBH01024435;XR_001236348;XR_262903 MODEL 39134497 misc_rna 7SK 7SK RNA 39132418 rrna 5S_rRNA 5S ribosomal RNA 8881290 protein-coding Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 FOUND IN cytosol (ortholog) NW_004955460 336805 744906 - 102012167 AGCD01048340;AGCD01048341;AGCD01048342;AGCD01048343;AGCD01048344;AGCD01048345;XM_005397713;XM_013521104 XP_005397770;XP_013376558 MODEL 10161148 protein-coding LOC106147112 collagen alpha-1(I) chain-like NW_004955520 2942846 2947790 - 106147112 AGCD01068087;GBBH01209943;XM_013507020 XP_013362474 MODEL 8858621 protein-coding Cast calpastatin ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); egg activation (ortholog); liver development (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955418 15859951 15974141 - 102011119 AGCD01019113;AGCD01019114;GBBH01060534;GBCB01042291;XM_013512987 XP_013368441 MODEL 8974771 pseudo LOC102012433 calcyclin-binding protein pseudogene NW_004955419 25409135 25411025 - 102012433 AGCD01020385 MODEL 8843634 protein-coding Trmt1 tRNA methyltransferase 1 ENCODES a protein that exhibits tRNA (guanine(26)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN tRNA N2-guanine methylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 68 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955415 32126630 32136770 - 102029616 AGCD01016710;AGCD01016711;GBDF01119256;XM_013512177 XP_013367631 MODEL 8900409 protein-coding Fam50b family with sequence similarity 50 member B NW_004955465 9512675 9529848 - 102023790 AGCD01050492;XM_005398989 XP_005399046 MODEL 9027736 ncrna LOC102010035 uncharacterized LOC102010035 NW_004955460 30819 34048 + 102010035 AGCD01048329;GBDF01187342;XR_263021 MODEL 39131398 protein-coding FITM2 fat storage inducing transmembrane protein 2 8715575 protein-coding LOC102015055 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog NW_004955442 9360262 9366950 - 102015055 AGCD01037678;GBDF01277879;XM_005391208;XM_005391210;XM_013517832;XM_013517833;XM_013517834 XP_005391265;XP_005391267;XP_013373286;XP_013373287;XP_013373288 MODEL 9024430 protein-coding Bkgd beta-keto-L-gulonate decarboxylase ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); zinc ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); regulation of DNA repair (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955414 780009 809016 - 102023894 AGCD01014746;AGCD01014747;AGCD01014748;AGCD01014749;GBCQ01000810;XM_005379702;XM_005379703;XM_005379704;XM_013511833 XP_005379759;XP_005379760;XP_005379761;XP_013367287 MODEL 8908274 protein-coding Atp6v1a ATPase H+ transporting V1 subunit A ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IID (ortholog); brain disease (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955427 13868683 13922028 + 102005949 AGCD01027260;AGCD01027261;AGCD01027262;GBDF01087139;XM_005386402;XM_013515121 XP_005386459;XP_013370575 MODEL 8758096 protein-coding Chchd3 coiled-coil-helix-coiled-coil-helix domain containing 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN cristae formation (ortholog); inner mitochondrial membrane organization (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955410 34818660 35093398 + 102006105 AGCD01011405;AGCD01011406;AGCD01011407;AGCD01011408;AGCD01011409;GBDJ01138148;XM_005377542;XM_013510637 XP_005377599;XP_013366091 MODEL 9052905 protein-coding E2f3 E2F transcription factor 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of fat cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung adenocarcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955483 6039569 6116000 - 102015522 AGCD01057768;AGCD01057769;GBBH01045634;GBCB01101037;XM_005403385 XP_005403442 MODEL 8975019 protein-coding Setdb2 SET domain bifurcated histone lysine methyltransferase 2 ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cell cycle (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955431 2899849 2943091 + 102024712 AGCD01029942;GBCC01045530;XM_005387590;XM_005387591;XM_005387592;XM_013515747;XM_013515748 XP_005387647;XP_005387648;XP_005387649;XP_013371201;XP_013371202 MODEL 8982585 protein-coding Trpt1 tRNA phosphotransferase 1 ENCODES a protein that exhibits tRNA 2'-phosphotransferase activity (ortholog); INVOLVED IN regulation of protein kinase activity (ortholog); tRNA splicing, via endonucleolytic cleavage and ligation (ortholog) NW_004955422 20851806 20854349 + 102020577 AGCD01023095;GBDF01118758;XM_005384638;XM_005384641;XM_013513959 XP_005384695;XP_005384698;XP_013369413 MODEL 9031080 protein-coding Wdr4 WDR4 tRNA N7-guanosine methyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN tRNA (guanine-N7)-methylation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat Syndrome 6 (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); tRNA (m7G46) methyltransferase complex (ortholog) NW_004955407 39044328 39066277 + 102008697 AGCD01007821;GBCB01087848;XM_005375807;XM_005375808 XP_005375864;XP_005375865 MODEL 9061668 ncrna LOC102017299 uncharacterized LOC102017299 NW_004955405 28123086 28134220 - 102017299 AGCD01005231;GBDF01278925;XR_001236056;XR_001236057 MODEL 8909157 pseudo LOC102021455 calcyclin-binding protein pseudogene NW_004955422 12772330 12772978 - 102021455 AGCD01022798 MODEL 9008565 protein-coding Plekha4 pleckstrin homology domain containing A4 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955559 1756695 1775558 + 102003593 AGCD01073666;GBCQ01039883;XM_005412930 XP_005412987 MODEL 8706936 protein-coding Apod apolipoprotein D ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN glucose metabolic process (ortholog); lipid metabolic process (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); gestational diabetes (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); dendrite (ortholog) NW_004955420 13553254 13570357 + 102024118 AGCD01020925;GBCE01000148;XM_005383177;XM_013513581 XP_005383234;XP_013369035 MODEL 8966923 protein-coding LOC102019957 E3 ubiquitin-protein ligase RNF4-like NW_004955437 9151213 9163753 - 102019957 AGCD01034518;AGCD01034519;AGCD01034520;AGCD01034521;AGCD01034522;GBDF01012766;XM_005390135 XP_005390192 MODEL 8812881 protein-coding LOC102018077 WD repeat-containing protein 87-like NW_004955468 2223885 2241409 - 102018077 AGCD01051804;GBBH01142412;XM_013522301;XM_013522302;XM_013522303 XP_013377755;XP_013377756;XP_013377757 MODEL 8722577 protein-coding Iqgap1 IQ motif containing GTPase activating protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); MAP-kinase scaffold activity (ortholog); INVOLVED IN caveola assembly (ortholog); cell migration (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955416 14558628 14652031 + 102014354 AGCD01017276;AGCD01017277;AGCD01017278;AGCD01017279;GBDF01087718;XM_005381503 XP_005381560 MODEL 8735666 ncrna LOC102006004 uncharacterized LOC102006004 NW_004955461 3891790 3962423 - 102006004 AGCD01048855;AGCD01048856;AGCD01048857;GBDK01220667;XR_263078 MODEL 8856572 protein-coding Aff3 ALF transcription elongation factor 3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN embryonic hindlimb morphogenesis (ortholog); regulation of DNA-templated transcription (ortholog); response to tumor necrosis factor (ortholog); ASSOCIATED WITH genetic disease (ortholog); KINSSHIP syndrome (ortholog); rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955470 5800152 6183761 - 102028181 AGCD01052760;AGCD01052761;AGCD01052762;AGCD01052763;AGCD01052764;AGCD01052765;GBCE01171131;XM_005400832 XP_005400889 MODEL 39131699 rrna 5S_rRNA 5S ribosomal RNA 39132903 snrna U1 U1 spliceosomal RNA 9012745 ncrna LOC102019662 uncharacterized LOC102019662 NW_004955453 15591053 15595926 + 102019662 AGCD01044894;GBCB01113901;XR_262745 MODEL 8752893 protein-coding Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase ENCODES a protein that exhibits p53 binding (ortholog); protease binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endosome membrane (ortholog) NW_004955481 9718369 9788048 - 102008852 AGCD01057112;AGCD01057113;AGCD01057114;AGCD01057115;AGCD01057116;GBDF01089520;XM_005402854;XM_005402855;XM_005402858;XM_005402862 XP_005402911;XP_005402912;XP_005402915;XP_005402919 MODEL 8710882 protein-coding Tpm1 tropomyosin 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament capping (ortholog); cardiac muscle contraction (ortholog); cellular response to reactive oxygen species (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial heart septal defect 1 (ortholog); cardiomyopathy (ortholog); catecholaminergic polymorphic ventricular tachycardia 1 (ortholog); FOUND IN actin cytoskeleton (ortholog); bleb (ortholog); cytoplasm (ortholog) NW_004955450 12197241 12223372 - 102029136 AGCD01042694;AGCD01042695;GBDI01010272;XM_005393795;XM_005393797;XM_005393799;XM_005393800;XM_005393801;XM_013518944;XM_013518945 XP_005393852;XP_005393854;XP_005393856;XP_005393857;XP_005393858;XP_013374398;XP_013374399 MODEL 39133328 snrna U4 U4 spliceosomal RNA 8707232 protein-coding Asic5 acid sensing ion channel subunit family member 5 ENCODES a protein that exhibits bile acid-gated sodium channel activity (ortholog); ligand-gated sodium channel activity (ortholog); proton channel activity (ortholog); INVOLVED IN neuronal action potential (ortholog); sodium ion import across plasma membrane (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955471 11262213 11287720 + 102014131 AGCD01053251;XM_005400949 XP_005401006 MODEL 8734707 protein-coding Ptges prostaglandin E synthase ENCODES a protein that exhibits glutathione binding (ortholog); glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN cellular response to resveratrol (ortholog); chronic inflammatory response (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Barrett's esophagus (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955445 10053745 10056981 + 102028350 AGCD01039640;XM_005392576 XP_005392633 MODEL 8764207 protein-coding LOC102005239 vomeronasal type-1 receptor 4-like NW_004955465 13086650 13087604 + 102005239 AGCD01050584;XM_005398946 XP_005399003 MODEL 8772855 protein-coding Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ENCODES a protein that exhibits DNA polymerase binding (ortholog); G-rich strand telomeric DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA geometric change (ortholog); lung development (ortholog); male gonad development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); chromatin (ortholog) NW_004955410 28032193 28042459 - 102026086 AGCD01011228;GBCQ01008932;XM_005377437;XM_013510602;XM_013510603;XM_013510604;XM_013510605 XP_005377494;XP_013366056;XP_013366057;XP_013366058;XP_013366059 MODEL 39133922 misc_rna 7SK 7SK RNA 8797188 ncrna LOC102024149 uncharacterized LOC102024149 NW_004955431 15828867 15848471 - 102024149 AGCD01030364;GBDF01014760;XR_001234583;XR_261480 MODEL 8827319 protein-coding Dnajb7 DnaJ heat shock protein family (Hsp40) member B7 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog) NW_004955413 26510844 26512855 - 102014229 AGCD01014446;GBDF01143714;XM_005379335 XP_005379392 MODEL 9029664 protein-coding Bambi BMP and activin membrane bound inhibitor ENCODES a protein that exhibits frizzled binding (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of osteoblast differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); Cardiomegaly (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955429 21024396 21025890 + 102026898 AGCD01028996;GBBH01187263;GBCQ01093600;XM_013515562 XP_013371016 MODEL 8901826 ncrna LOC102010037 uncharacterized LOC102010037 NW_004955460 11260440 11300237 + 102010037 AGCD01048631;GBDF01076385;XR_001236536;XR_263060 MODEL 8847449 protein-coding Fam53a family with sequence similarity 53 member A NW_004955514 917344 947729 - 102015976 AGCD01067027;GBCE01130101;XM_005408700 XP_005408757 MODEL 8930553 ncrna LOC102010832 uncharacterized LOC102010832 NW_004955437 2142308 2145021 + 102010832 AGCD01034260;GBDF01276932;XR_261830 MODEL 8721897 protein-coding LOC102015057 SIGLEC family-like protein 1 NW_004955558 1080890 1097821 - 102015057 AGCD01073414;AGCD01073415;GBDF01190928;XM_005412691;XM_005412692;XM_005412693 XP_005412748;XP_005412749;XP_005412750 MODEL 8973606 protein-coding Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 ENCODES a protein that exhibits glycerophosphocholine phosphodiesterase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN cerebral cortex neuron differentiation (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); negative regulation of Notch signaling pathway (ortholog); FOUND IN axon (ortholog); membrane (ortholog); neuronal cell body (ortholog) NW_004955414 16322705 16416036 + 102026098 AGCD01015209;AGCD01015210;AGCD01015211;AGCD01015212;GBBH01206648;GBCQ01114411;XM_005379889 XP_005379946 MODEL 8881119 ncrna LOC102006005 uncharacterized LOC102006005 NW_004955462 6714177 6722753 - 102006005 AGCD01049288;GBDI01311251;XR_263100;XR_263101 MODEL 8888180 protein-coding Tti1 TELO2 interacting protein 1 ENCODES a protein that exhibits kinase binding (ortholog); protein-containing complex stabilizing activity (ortholog); INVOLVED IN positive regulation of DNA damage checkpoint (ortholog); protein stabilization (ortholog); regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY AND MOVEMENT ABNORMALITIES (ortholog); FOUND IN cytoplasm (ortholog); TORC1 complex (ortholog); TORC2 complex (ortholog) NW_004955445 18676285 18729512 + 102014506 AGCD01039906;GBBH01110693;XM_005392543;XM_005392544;XM_005392545;XM_005392546;XM_005392547;XM_013518303;XM_013518304;XM_013518305 XP_005392600;XP_005392601;XP_005392602;XP_005392603;XP_005392604;XP_013373757;XP_013373758;XP_013373759 MODEL 8916280 protein-coding Blcap BLCAP apoptosis inducing factor INVOLVED IN apoptotic nuclear changes (ortholog) NW_004955445 19116945 19127469 + 102018038 AGCD01039911;GBDF01089233;XM_005392557;XR_001235621 XP_005392614 MODEL 8802803 protein-coding LOC102007048 liver carboxylesterase 1-like NW_004955433 13239101 13268057 - 102007048 AGCD01031682;GBDF01064548;XM_005388323;XM_005388325 XP_005388380;XP_005388382 MODEL 39134498 misc_rna 7SK 7SK RNA 10161947 ncrna LOC106150090 uncharacterized LOC106150090 NW_004955464 4595196 4600399 - 106150090 AGCD01049992;GBCE01177987;XR_001236692 MODEL 39132906 snrna U1 U1 spliceosomal RNA 39132419 rrna 5S_rRNA 5S ribosomal RNA 8758678 protein-coding Atp6v1b1 ATPase H+ transporting V1 subunit B1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); ATP metabolic process (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH autosomal recessive distal renal tubular acidosis 3 with or without sensorineural hearing loss (ortholog); autosomal recessive nonsyndromic deafness (ortholog); Distal Renal Tubular Acidosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955424 14256096 14281572 - 102029761 AGCD01024648;AGCD01024649;GBCE01141930;XM_005385605 XP_005385662 MODEL 8814779 protein-coding Rfk riboflavin kinase ENCODES a protein that exhibits riboflavin kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); positive regulation of NAD(P)H oxidase activity (ortholog); reactive oxygen species metabolic process (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) NW_004955512 2889265 2898195 + 102029315 AGCD01066691;AGCD01066692;GBBH01065333;GBDF01001741;XM_005408308 XP_005408365 MODEL 10369619 protein-coding LOC106147113 translation initiation factor IF-2-like NW_004955520 1428491 1429500 - 106147113 AGCD01068053;AGCD01068054;GBDF01045008;XM_013507022 XP_013362476 MODEL 8730781 protein-coding E2f4 E2F transcription factor 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); cell volume homeostasis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Lynch syndrome (ortholog); otitis media (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955484 9421396 9427826 - 102010488 AGCD01058415;GBDF01118876;XM_005403677;XM_013503914;XM_013503915 XP_005403734;XP_013359368;XP_013359369 MODEL 9020789 protein-coding Gpbar1 G protein-coupled bile acid receptor 1 ENCODES a protein that exhibits G protein-coupled bile acid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway (ortholog); cellular response to bile acid (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); receptor complex (ortholog) NW_004955453 15109711 15112438 - 102014529 AGCD01044885;GBDJ01061681;XM_005395661 XP_005395718 MODEL 8823539 pseudo LOC102021458 60S ribosomal protein L27 pseudogene NW_004955494 2795835 2796269 - 102021458 AGCD01061451 MODEL 8790886 protein-coding Setx senataxin ENCODES a protein that exhibits DNA/RNA helicase activity (ortholog); identical protein binding (ortholog); transcription termination site sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to oxidative stress (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 4 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); growth cone (ortholog) NW_004955513 1718432 1776133 - 102026139 AGCD01066862;GBDK01147152;GBDK01147154;XM_005408377 XP_005408434 MODEL 39132356 snrna U6 U6 spliceosomal RNA 8750659 ncrna LOC102017307 uncharacterized LOC102017307 NW_004955408 11829505 11833182 + 102017307 AGCD01008319;GBDF01051104;XR_259680 MODEL 8854725 protein-coding Castor1 cytosolic arginine sensor for mTORC1 subunit 1 ENCODES a protein that exhibits arginine binding (ortholog); identical protein binding (ortholog); molecular sensor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to L-arginine (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytosol (ortholog); GATOR2 complex (ortholog) NW_004955455 4530842 4535358 - 102018257 AGCD01045679;GBBH01164658;XM_005396250;XM_013520370;XM_013520371 XP_005396307;XP_013375824;XP_013375825 MODEL 8865060 protein-coding Wdr41 WD repeat domain 41 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of autophagy (ortholog); FOUND IN cytoplasm (ortholog); guanyl-nucleotide exchange factor complex (ortholog) NW_004955425 23366130 23510897 + 102016494 AGCD01025845;AGCD01025846;GBDF01088944;XM_005386025;XM_013514857 XP_005386082;XP_013370311 MODEL 9000373 protein-coding Apoe apolipoprotein E ENCODES a protein that exhibits amyloid-beta binding (ortholog); antioxidant activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); amyloid precursor protein metabolic process (ortholog); artery development (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); adenocarcinoma (ortholog); age related macular degeneration 1 (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); chylomicron remnant (ortholog) NW_004955555 1998170 2002003 + 102021605 AGCD01073120;AGCD01073121;GBBH01000498;GBDJ01017825;XM_013508700 XP_013364154 MODEL 8861142 pseudo LOC102019961 60S ribosomal protein L6 pseudogene NW_004955440 18587382 18588882 + 102019961 AGCD01036614 MODEL 8806943 protein-coding Fitm2 fat storage inducing transmembrane protein 2 ENCODES a protein that exhibits coenzyme A diphosphatase activity (ortholog); diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); fatty-acyl-CoA catabolic process (ortholog); intracellular triglyceride homeostasis (ortholog); ASSOCIATED WITH Siddiqi syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955445 13027431 13032089 + 102021400 AGCD01039767;GBDI01219068;XM_005392483 XP_005392540 MODEL 39134186 misc_rna 7SK 7SK RNA 8840440 protein-coding Kif25 kinesin family member 25 INVOLVED IN establishment of spindle orientation (ortholog); negative regulation of autophagy (ortholog); negative regulation of mitotic centrosome separation (ortholog) NW_004955439 14282985 14311330 - 102026261 AGCD01035973;GBDJ01352842;XM_013517304 XP_013372758 MODEL 8947779 pseudo LOC102022451 ubiquitin-conjugating enzyme E2 D3 pseudogene NW_004955451 15454957 15455313 - 102022451 AGCD01043609 MODEL 8975249 ncrna LOC102003519 uncharacterized LOC102003519 NW_004955459 3020453 3021512 - 102003519 AGCD01048006;GBDF01017116;XR_263011 MODEL 8937886 protein-coding Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); cellular response to BMP stimulus (ortholog); ASSOCIATED WITH stroke (ortholog) NW_004955426 19146288 19471880 - 102027205 AGCD01026540;AGCD01026541;AGCD01026542;AGCD01026543;AGCD01026544;AGCD01026545;AGCD01026546;AGCD01026547;GBDJ01062082;XM_005386164 XP_005386221 MODEL 8984891 protein-coding Iqgap2 IQ motif containing GTPase activating protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); calmodulin binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); regulation of actin cytoskeleton organization (ortholog); thrombin-activated receptor signaling pathway (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); filopodium (ortholog) NW_004955425 24167985 24384912 - 102021575 AGCD01025879;AGCD01025880;AGCD01025881;AGCD01025882;AGCD01025883;AGCD01025884;AGCD01025885;GBDI01062233;XM_005386040;XM_013514848 XP_005386097;XP_013370302 MODEL 8786989 protein-coding Aff4 ALF transcription elongation factor 4 INVOLVED IN response to endoplasmic reticulum stress (ortholog); spermatid development (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); autism spectrum disorder (ortholog); bone development disease (ortholog); FOUND IN euchromatin (ortholog); fibrillar center (ortholog); nuclear body (ortholog) NW_004955408 4247730 4305194 - 102007409 AGCD01008099;GBDI01117383;XM_013508370 XP_013363824 MODEL 39131700 rrna 5S_rRNA 5S ribosomal RNA 8867422 pseudo LOC102019667 caprin-1 pseudogene NW_004955407 32716950 32719033 - 102019667 AGCD01007680 MODEL 8914093 pseudo LOC102010833 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955532 3917497 3917975 - 102010833 AGCD01070305 MODEL 39133329 snrna U4 U4 spliceosomal RNA 8952804 pseudo LOC102015062 FGFR1 oncogene partner-like NW_004955446 16579166 16585757 - 102015062 AGCD01040337;AGCD01040338 MODEL 8836287 protein-coding Pdik1l PDLIM1 interacting kinase 1 like FOUND IN nucleoplasm (ortholog) NW_004955452 5571433 5577801 + 102012919 AGCD01044043;GBDF01280653;GBDI01279074;XM_005394842 XP_005394899 MODEL 8831336 protein-coding Tpm2 tropomyosin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of ATP-dependent activity (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); congenital myopathy 4A (ortholog); COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955472 611079 617823 + 102010052 AGCD01053342;GBBH01001449;GBCB01010777;XM_013522938;XM_013522939;XM_013522941;XM_013522942 XP_013378392;XP_013378393;XP_013378395;XP_013378396 MODEL 9018318 protein-coding Trmt10a tRNA methyltransferase 10A ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN magnesium ion homeostasis (ortholog); tRNA methylation (ortholog); tRNA N1-guanine methylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Microcephaly, Short Stature, and Impaired Glucose Metabolism 1 (ortholog); Nervous System Malformations (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955496 8021747 8037562 + 102023493 AGCD01062387;GBDI01279046;XM_005406269;XM_005406270 XP_005406326;XP_005406327 MODEL 8770324 protein-coding Plekha5 pleckstrin homology domain containing A5 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN reproductive system development (ortholog); ASSOCIATED WITH BILATERAL CLEFT LIP (ortholog); cleft lip (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955413 15239070 15470137 + 102012418 AGCD01014067;AGCD01014068;AGCD01014069;AGCD01014070;AGCD01014071;AGCD01014072;AGCD01014073;GBBH01165630;GBDF01085078;XM_013511432;XM_013511433;XM_013511434;XM_013511435 XP_013366886;XP_013366887;XP_013366888;XP_013366889 MODEL 10191111 pseudo LOC102018079 Ig heavy chain V-I region 5-like NW_004955470 851205 851707 - 102018079 AGCD01052624 MODEL 8886991 ncrna LOC102005243 uncharacterized LOC102005243 NW_004955467 11763835 11774999 + 102005243 AGCD01051617;GBDF01234200;XR_263363 MODEL 39133923 misc_rna 7SK 7SK RNA 8920227 protein-coding E2f5 E2F transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hydrocephalus (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 3131282 3155872 + 102003545 AGCD01017904;AGCD01017905;GBCE01129791;XM_005381740 XP_005381797 MODEL 8904318 protein-coding Ticrr TOPBP1 interacting checkpoint and replication regulator ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN regulation of DNA-templated DNA replication initiation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 15572789 15615556 - 102027971 AGCD01017335;AGCD01017336;GBDF01278969;XM_005381551;XM_013512555;XM_013512556 XP_005381608;XP_013368009;XP_013368010 MODEL 8720573 protein-coding Alg12 ALG12 alpha-1,6-mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ig (ortholog); genetic disease (ortholog) NW_004955413 33030994 33039622 - 102017860 AGCD01014655;GBCB01058939;XM_005379529 XP_005379586 MODEL 8754380 protein-coding Banf1 barrier to autointegration nuclear assembly factor 1 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN chromatin organization (ortholog); DNA integration (ortholog); mitotic nuclear membrane reassembly (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Nestor-Guillermo progeria syndrome (ortholog); FOUND IN chromatin (ortholog); condensed chromosome (ortholog); cytoplasm (ortholog) NW_004955422 19337038 19338824 - 102022089 AGCD01023001;GBDK01018620;XM_005384437 XP_005384494 MODEL 8863795 protein-coding Fam53b family with sequence similarity 53 member B INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); regulation of canonical Wnt signaling pathway (ortholog); FOUND IN nucleus (ortholog) NW_004955477 2609431 2725001 - 102003542 AGCD01055525;GBBH01117110;XM_005401975;XM_005401977;XM_013503079 XP_005402032;XP_005402034;XP_013358533 MODEL 8869252 protein-coding Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cellular response to oxidative stress (ortholog); mitochondrial disulfide relay system (ortholog); PARTICIPATES IN intermembrane space assembly pathway of mitochondrial protein import; FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955429 16911392 16921353 - 102003166 AGCD01028841;GBDK01285086;XM_005387058 XP_005387115 MODEL 8919052 protein-coding Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 INVOLVED IN regulation of mitotic metaphase/anaphase transition (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN mitotic spindle (ortholog) NW_004955403 3902881 4096189 + 102019009 AGCD01001777;AGCD01001778;AGCD01001779;GBCE01186240;XM_013512122 XP_013367576 MODEL 39134499 misc_rna 7SK 7SK RNA 9016077 protein-coding Afg1l AFG1 like ATPase INVOLVED IN mitochondrial protein catabolic process (ortholog); mitochondrial protein quality control (ortholog); mitochondrion organization (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955411 33386568 33617721 + 102011418 AGCD01012355;AGCD01012356;AGCD01012357;AGCD01012358;AGCD01012359;AGCD01012360;AGCD01012361;AGCD01012362;AGCD01012363;AGCD01012364;AGCD01012365;AGCD01012366;AGCD01012367;AGCD01012368;AGCD01012369;AGCD01012370;AGCD01012371;AGCD01012372;AGCD01012373;GBDF01055437;XM_005377845;XM_005377846;XM_013510900 XP_005377902;XP_005377903;XP_013366354 MODEL 39132911 snrna U1 U1 spliceosomal RNA 8928916 protein-coding Asip agouti signaling protein ENCODES a protein that exhibits receptor antagonist activity (ortholog); type 1 melanocortin receptor binding (ortholog); INVOLVED IN melanin biosynthetic process (ortholog); negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of melanin biosynthetic process (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; melanocortin system pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); coat/hair pigmentation trait (ortholog); dermatitis (ortholog); FOUND IN extracellular space (ortholog) NW_004955422 27021810 27150339 - 102024692 AGCD01023311;AGCD01023312;AGCD01023313;GBDJ01318713;XM_005384833;XM_005384834 XP_005384890;XP_005384891 MODEL 8751959 protein-coding LOC102024151 odorant-binding protein 2b NW_004955513 2677180 2678707 - 102024151 AGCD01066885;GBBH01002292;GBCE01008927;XM_005408643 XP_005408700 MODEL 8725629 protein-coding Ptges2 prostaglandin E synthase 2 ENCODES a protein that exhibits DNA binding (ortholog); lyase activity (ortholog); prostaglandin-E synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); lipid metabolic process (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN prostaglandin biosynthetic pathway; type II interferon signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Carbon Tetrachloride Poisoning (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrion (ortholog) NW_004955419 608313 612813 + 102017772 AGCD01019598;GBDF01127195;XM_005382381 XP_005382438 MODEL 8836150 protein-coding LOC102010041 coatomer subunit gamma-2 NW_004955410 36982233 37086997 + 102010041 AGCD01011442;AGCD01011443;AGCD01011444;AGCD01011445;GBDF01004497;XM_005377554;XM_013510640 XP_005377611;XP_013366094 MODEL 39134187 misc_rna 7SK 7SK RNA 8708410 ncrna LOC102012439 uncharacterized LOC102012439 NW_004955421 24954942 25002542 - 102012439 AGCD01022225;AGCD01022226;AGCD01022227;GBCQ01157706;XR_001233829;XR_260827 MODEL 8917734 protein-coding Trpv1 transient receptor potential cation channel subfamily V member 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel activity (ortholog); calmodulin binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); alcohol withdrawal syndrome (ortholog); amphetamine abuse (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); external side of plasma membrane (ortholog) NW_004955467 13221391 13239089 + 102022802 AGCD01051668;AGCD01051669;XM_005399725 XP_005399782 MODEL 8927708 protein-coding Gdpgp1 GDP-D-glucose phosphorylase 1 ENCODES a protein that exhibits GDP-D-glucose phosphorylase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); response to stress (ortholog) NW_004955416 15098922 15102499 - 102021439 AGCD01017300;GBDF01188866;XM_005381528 XP_005381585 MODEL 8905709 ncrna LOC102007052 uncharacterized LOC102007052 NW_004955436 7964613 7966777 - 102007052 AGCD01033721;GBDF01079769;XR_261769 MODEL 8896919 protein-coding Iqgap3 IQ motif containing GTPase activating protein 3 ENCODES a protein that exhibits calmodulin binding (ortholog); myosin VI light chain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); lateral plasma membrane (ortholog) NW_004955545 2627334 2663786 - 102003382 AGCD01071914;AGCD01071915;GBDK01080432;XM_005411682;XM_013508311 XP_005411739;XP_013363765 MODEL 8876425 protein-coding Tti2 TELO2 interacting protein 2 ASSOCIATED WITH autosomal recessive intellectual developmental disorder 39 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN TTT Hsp90 cochaperone complex (ortholog) NW_004955463 9652226 9660712 - 102007869 AGCD01049795;GBDF01248696;XM_005398403;XM_005398404 XP_005398460;XP_005398461 MODEL 39133331 snrna U4 U4 spliceosomal RNA 8931047 protein-coding Rflnb refilin B ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle organization (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament bundle (ortholog) NW_004955481 2102576 2107947 - 102006457 AGCD01056866;GBCB01008384;GBDK01281227;XM_013503522 XP_013358976 MODEL 8946723 protein-coding Atp6v1b2 ATPase H+ transporting V1 subunit B2 INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autosomal dominant congenital deafness with onychodystrophy (ortholog); epilepsy (ortholog); follicular lymphoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 43860811 43886398 + 102024869 AGCD01002789;GBBH01090243;XM_005373627 XP_005373684 MODEL 8903647 protein-coding Heg1 heart development protein with EGF like domains 1 INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac muscle tissue growth (ortholog); cell-cell junction organization (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); external side of plasma membrane (ortholog) NW_004955427 24035193 24115483 - 102020938 AGCD01027499;AGCD01027500;GBCB01100064;GBCE01075888;XM_005386545 XP_005386602 MODEL 39132357 snrna U6 U6 spliceosomal RNA 8832984 protein-coding Gpbp1 GC-rich promoter binding protein 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955446 10685476 10741375 - 102011374 AGCD01040185;GBDJ01075106;GBDK01084172;XM_013518445 XP_013373899 MODEL 8821410 protein-coding LOC102017310 olfactory receptor 6C3-like NW_004955458 2530359 2531246 - 102017310 AGCD01047237;XM_013520863 XP_013376317 MODEL 8917461 protein-coding Castor2 cytosolic arginine sensor for mTORC1 subunit 2 ENCODES a protein that exhibits arginine binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to L-arginine (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytosol (ortholog); GATOR2 complex (ortholog) NW_004955456 13242401 13282469 + 102013907 AGCD01046582;AGCD01046583;GBCE01052863;GBCQ01174661;XM_005396733 XP_005396790 MODEL 39131557 protein-coding APOF apolipoprotein F 8872215 protein-coding Wdr43 WD repeat domain 43 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); transcription elongation factor activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); regulation of stem cell population maintenance (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955469 10777332 10835577 + 102016256 AGCD01052550;AGCD01052551;GBDF01226152;XM_005400538;XM_005400539 XP_005400595;XP_005400596 MODEL 9005382 ncrna LOC102005245 uncharacterized LOC102005245 NW_004955468 5664674 5675915 + 102005245 AGCD01051973;GBDF01154207;XR_001236889;XR_263388;XR_263389;XR_263390 MODEL 39132917 snrna U1 U1 spliceosomal RNA 8909123 protein-coding LOC102019962 protein FRG1 NW_004955552 1563891 1589239 + 102019962 AGCD01072778;AGCD01072779;GBCE01026674;XM_013508607 XP_013364061 MODEL 9068178 pseudo LOC102018080 olfactory receptor 51F2-like NW_004955414 20321335 20322268 + 102018080 AGCD01015368 MODEL 9035096 pseudo LOC102003520 60S ribosomal protein L39 pseudogene NW_004955459 14326789 14327010 - 102003520 AGCD01048297 MODEL 9060975 protein-coding Plekha6 pleckstrin homology domain containing A6 NW_004955406 40066260 40200629 - 102020415 AGCD01006653;AGCD01006654;GBDK01395763;XM_005375292;XM_005375295;XM_005375306;XM_013522685;XM_013522688;XM_013522690;XM_013522693;XM_013522695;XM_013522700;XM_013522703;XM_013522704;XM_013522706;XM_013522707;XM_013522709;XM_013522711;XM_013522720;XM_013522725;XM_013522731;XM_013522738;XM_013522746;XM_013522750;XM_013522753;XM_013522759;XR_001237018 XP_005375349;XP_005375352;XP_005375363;XP_013378139;XP_013378142;XP_013378144;XP_013378147;XP_013378149;XP_013378154;XP_013378157;XP_013378158;XP_013378160;XP_013378161;XP_013378163;XP_013378165;XP_013378174;XP_013378179;XP_013378185;XP_013378192;XP_013378200;XP_013378204;XP_013378207;XP_013378213 MODEL 8919855 protein-coding Kif26a kinesin family member 26A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); enteric nervous system development (ortholog); microtubule-based movement (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 11 (ortholog) NW_004955538 2801706 2832888 + 102017381 AGCD01071142;GBBH01077414;GBDF01148658;XM_013507896 XP_013363350 MODEL 8781105 protein-coding Blk BLK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); peptidyl-tyrosine phosphorylation (ortholog); positive regulation of insulin secretion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH diabetes mellitus (ortholog); Kawasaki disease (ortholog); maturity-onset diabetes of the young (ortholog) NW_004955403 52825397 52874007 + 102028368 AGCD01003019;AGCD01003020;GBBH01183458;XM_005373820;XM_005373821;XM_005373822;XM_005373823;XM_013514535 XP_005373877;XP_005373878;XP_005373879;XP_005373880;XP_013369989 MODEL 10122872 ncrna LOC106150091 uncharacterized LOC106150091 NW_004955464 1044234 1081179 - 106150091 AGCD01049944;GBCE01039814;XR_001236697 MODEL 39132424 rrna 5S_rRNA 5S ribosomal RNA 8741276 protein-coding Fam53c family with sequence similarity 53 member C NW_004955418 2102671 2114993 - 102029514 AGCD01018741;GBDF01084694;XM_005382112;XM_005382113;XM_005382115 XP_005382169;XP_005382170;XP_005382172 MODEL 10285813 ncrna LOC106147114 uncharacterized LOC106147114 NW_004955520 1429529 1432899 + 106147114 AGCD01068054;GBDF01280058;XR_001231869;XR_001231870 MODEL 8927466 pseudo LOC102015066 tRNA pseudouridine(38/39) synthase pseudogene NW_004955402 1109388 1111146 - 102015066 AGCD01000048 MODEL 8888486 protein-coding Chchd5 coiled-coil-helix-coiled-coil-helix domain containing 5 FOUND IN mitochondrion (ortholog) NW_004955470 1704461 1708675 - 102025782 AGCD01052653;GBDJ01084263;XM_005400600 XP_005400657 MODEL 8958685 protein-coding LOC102019673 myosin-6 NW_004955409 36932705 36955373 + 102019673 AGCD01010484;GBDJ01229901;XM_005377074 XP_005377131 MODEL 9015783 protein-coding Sez6 seizure related 6 homolog INVOLVED IN activation of protein kinase C activity (ortholog); adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) NW_004955481 4175637 4220809 + 102017336 AGCD01056932;GBBH01109329;XM_005402699;XM_005402700;XM_005402701;XM_005402702;XM_013503418 XP_005402756;XP_005402757;XP_005402758;XP_005402759;XP_013358872 MODEL 8786628 protein-coding LOC102021461 tubulin alpha-1C chain-like NW_004955499 193636 205355 + 102021461 AGCD01063193;AGCD01063194;AGCD01063195;AGCD01063196;AGCD01063197;XM_013505550 XP_013361004 MODEL 8797403 protein-coding Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 ENCODES a protein that exhibits mRNA binding (ortholog); RNA transmembrane transporter activity (ortholog); INVOLVED IN mRNA transport (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH schizophrenia (ortholog); silicosis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955403 19540814 19548417 - 102003932 AGCD01002133;GBCB01002496;GBCQ01000906;XM_013512733 XP_013368187 MODEL 8921061 protein-coding Trpv3 transient receptor potential cation channel subfamily V member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN negative regulation of hair cycle (ortholog); positive regulation of calcium ion import (ortholog); response to temperature stimulus (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); autosomal dominant mutilating palmoplantar keratoderma with periorificial keratotic plaques (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); membrane (ortholog) NW_004955467 13246099 13276741 + 102024887 AGCD01051669;AGCD01051670;GBDF01247435;XM_013522250 XP_013377704 MODEL 8898706 protein-coding Tpm3 tropomyosin 3 ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN brush border (ortholog); cleavage furrow (ortholog); cortical cytoskeleton (ortholog) NW_004955545 715860 746580 - 102027114 AGCD01071815;GBBH01031876;XM_005411467;XM_005411469;XM_005411470;XM_005411472;XM_005411473;XM_005411474;XM_005411475;XM_005411476;XM_005411478;XM_005411479;XM_005411481;XM_013508242;XM_013508243;XM_013508244;XM_013508245 XP_005411524;XP_005411526;XP_005411527;XP_005411529;XP_005411530;XP_005411531;XP_005411532;XP_005411533;XP_005411535;XP_005411536;XP_005411538;XP_013363696;XP_013363697;XP_013363698;XP_013363699 MODEL 8786653 protein-coding Fiz1 FLT3 interacting zinc finger 1 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); INVOLVED IN positive regulation of protein phosphorylation (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955567 746216 751032 + 102023083 AGCD01074430;AGCD01074431;GBDI01242402;XM_013509225 XP_013364679 MODEL 39131701 rrna 5S_rRNA 5S ribosomal RNA 8723248 ncrna LOC102006006 uncharacterized LOC102006006 NW_004955462 11471552 11476166 - 102006006 AGCD01049391;GBDF01209715;XR_001236585 MODEL 8700035 pseudo LOC102022452 ubiquitin thioesterase OTUB1-like NW_004955403 808314 811093 - 102022452 AGCD01001708 MODEL 8943823 protein-coding Helb DNA helicase B ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); DNA helicase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); DNA replication, synthesis of primer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); DNA replication factor A complex (ortholog) NW_004955458 12929345 12971059 + 102026400 AGCD01047793;AGCD01047794;GBDF01015721;XM_013520973;XR_001236467 XP_013376427 MODEL 8898072 protein-coding Banf2 BANF family member 2 ENCODES a protein that exhibits identical protein binding (ortholog) NW_004955415 26671039 26692478 + 102010798 AGCD01016602;GBBH01129166;XM_005380909 XP_005380966 MODEL 8895433 protein-coding LOC102010836 protein S100-A6-like NW_004955545 93760 170651 - 102010836 AGCD01071765;AGCD01071766;AGCD01071767;AGCD01071768;AGCD01071769;AGCD01071770;AGCD01071771;AGCD01071772;AGCD01071773;AGCD01071774;GBDJ01329857;XM_005411405;XR_001232180 XP_005411462 MODEL 8702117 protein-coding Alg13 ALG13 UDP-N-acetylglucosaminyltransferase subunit ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); negative regulation of TORC1 signaling (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); UDP-N-acetylglucosamine transferase complex (ortholog) NW_004955490 4069866 4140494 - 102030323 AGCD01060180;AGCD01060181;AGCD01060182;GBCE01134171;XM_005404636;XM_005404639;XM_005404642;XM_013504527;XM_013504528;XM_013504529;XM_013504530;XM_013504531;XM_013504532;XM_013504533;XM_013504534 XP_005404693;XP_005404696;XP_005404699;XP_013359981;XP_013359982;XP_013359983;XP_013359984;XP_013359985;XP_013359986;XP_013359987;XP_013359988 MODEL 39131601 snrna U1 U1 spliceosomal RNA 9001610 protein-coding Casz1 castor zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of amacrine cell differentiation (ortholog); negative regulation of cell differentiation (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); chromosome 1p36 deletion syndrome (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) NW_004955486 2923239 2975835 + 102014052 AGCD01059013;GBBH01003788;GBDK01282114;XM_013504268;XM_013504270 XP_013359722;XP_013359724 MODEL 8760564 pseudo LOC102012453 heterogeneous nuclear ribonucleoprotein A3-like NW_004955425 6920489 6940923 - 102012453 AGCD01025375;AGCD01025376 MODEL 8888329 protein-coding LOC102019963 uncharacterized protein C12orf45-like NW_004955442 13763036 13765604 - 102019963 AGCD01037787;GBDF01105623;XM_005391324;XM_005391325;XM_013517635 XP_005391381;XP_005391382;XP_013373089 MODEL 8986275 protein-coding Pdilt protein disulfide isomerase like, testis expressed ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein folding chaperone (ortholog); INVOLVED IN cell migration (ortholog); spermatid development (ortholog) NW_004955442 4006525 4045037 - 102014087 AGCD01037517;GBDF01000360;XM_005391126 XP_005391183 MODEL 39134500 misc_rna 7SK 7SK RNA 8830875 protein-coding Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); positive regulation of Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Weight Gain (ortholog) NW_004955506 1110146 1113130 + 102022207 AGCD01065245;AGCD01065246;GBBH01119203;GBBH01119219;XM_005407503 XP_005407560 MODEL 9048400 protein-coding Trmt10b tRNA methyltransferase 10B ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog) NW_004955419 28693509 28720006 - 102004072 AGCD01020473;GBDI01353475;XM_005382868;XM_005382869;XM_005382870;XM_005382871;XM_005382872;XM_013513181;XM_013513182 XP_005382925;XP_005382926;XP_005382927;XP_005382928;XP_005382929;XP_013368635;XP_013368636 MODEL 8723979 protein-coding Afg2a AAA ATPase AFG2A ENCODES a protein that exhibits preribosome binding (ortholog); INVOLVED IN brain development (ortholog); DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with hearing loss, seizures, and brain abnormalities (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955428 17525388 17823478 - 102010822 AGCD01028044;AGCD01028045;AGCD01028046;AGCD01028047;AGCD01028048;AGCD01028049;AGCD01028050;AGCD01028051;AGCD01028052;GBDF01224056;XM_005386754;XM_005386755 XP_005386811;XP_005386812 MODEL 39133924 misc_rna 7SK 7SK RNA 8730431 ncrna LOC102024154 uncharacterized LOC102024154 NW_004955515 4883104 4889729 - 102024154 AGCD01067332;GBDF01014882;XR_264527 MODEL 39132359 snrna U6 U6 spliceosomal RNA 8913244 protein-coding Asl argininosuccinate lyase ENCODES a protein that exhibits argininosuccinate lyase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); ammonia assimilation cycle (ortholog); arginine metabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); argininosuccinic aciduria (ortholog); autistic disorder (ortholog); FOUND IN cell body fiber (ortholog); mitochondrial outer membrane (ortholog); neuronal cell body (ortholog) NW_004955456 8409767 8419915 - 102005227 AGCD01046476;AGCD01046477;AGCD01046478;GBDJ01008461;GBDJ01008463;XM_013520597 XP_013376051 MODEL 8822405 protein-coding E2f6 E2F transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH lung non-small cell carcinoma (ortholog); primary ciliary dyskinesia 40 (ortholog); Triple Negative Breast Neoplasms (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 6014476 6029090 - 102006035 AGCD01059351;AGCD01059352;GBCB01002827;XM_005404425 XP_005404482 MODEL 9055775 protein-coding Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autoimmune thrombocytopenic purpura (ortholog); cholestasis (ortholog); FOUND IN extracellular space (ortholog) NW_004955513 2761386 2786447 + 102017596 AGCD01066889;AGCD01066890;GBCQ01185243;XM_013506558;XM_013506559;XM_013506560;XM_013506561 XP_013362012;XP_013362013;XP_013362014;XP_013362015 MODEL 8876239 protein-coding LOC102005247 apolipoprotein L6-like NW_004955413 21930891 21954562 + 102005247 AGCD01014275;AGCD01014276;AGCD01014277;GBDJ01276595;XM_005379645 XP_005379702 MODEL 8999662 ncrna LOC102018084 uncharacterized LOC102018084 NW_004955414 33063328 33066744 - 102018084 AGCD01015795;GBCB01039007;XR_001233137 MODEL 8844673 protein-coding LOC102006008 cysteine-rich secretory protein 2 NW_004955411 8242364 8257545 + 102006008 AGCD01011720;GBDF01010088;XM_005377669;XM_005377670;XM_005377671;XM_013510701;XM_013510702 XP_005377726;XP_005377727;XP_005377728;XP_013366155;XP_013366156 MODEL 9044566 protein-coding Blm BLM RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); ATP binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); cellular response to camptothecin (ortholog); cellular response to hydroxyurea (ortholog); PARTICIPATES IN DNA replication pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Bloom syndrome (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); lateral element (ortholog) NW_004955416 14814753 14899865 + 102015513 AGCD01017283;AGCD01017284;AGCD01017285;AGCD01017286;GBDF01222241;XM_005381505;XM_005381506;XM_013512656;XM_013512657 XP_005381562;XP_005381563;XP_013368110;XP_013368111 MODEL 8728771 protein-coding Iqsec1 IQ motif and Sec7 domain ArfGEF 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN dendritic spine development (ortholog); positive regulation of focal adhesion disassembly (ortholog); positive regulation of keratinocyte migration (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); intellectual developmental disorder with short stature and behavioral abnormalities (ortholog); Liver Metastasis (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955429 13246585 13373189 + 102007255 AGCD01028739;AGCD01028740;AGCD01028741;AGCD01028742;GBBH01188484;GBDF01250621;XM_005386983;XM_005386985;XM_005386986;XM_005386987;XM_005386988;XM_005386989;XM_013515453;XM_013515455;XM_013515456;XM_013515457 XP_005387040;XP_005387042;XP_005387043;XP_005387044;XP_005387045;XP_005387046;XP_013370907;XP_013370909;XP_013370910;XP_013370911 MODEL 8986117 protein-coding Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ENCODES a protein that exhibits protein-containing complex binding (ortholog); RNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); epithelial to mesenchymal transition (ortholog); mRNA modification (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); hepatocellular carcinoma (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955408 2060288 2064998 - 102011086 AGCD01007986;GBCB01001136;GBDI01017477;XM_005376037;XM_013508056 XP_005376094;XP_013363510 MODEL 8938290 pseudo LOC102017312 poly(rC)-binding protein 2 pseudogene NW_004955460 5403676 5405208 + 102017312 AGCD01048450;XR_263068 MODEL 8771587 protein-coding Atp6v1c1 ATPase H+ transporting V1 subunit C1 ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH DOORS syndrome (ortholog); Neoplasm Metastasis (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN apical part of cell (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955417 27340916 27376541 + 102020804 AGCD01018548;AGCD01018549;AGCD01018550;AGCD01018551;GBCE01052289;GBCE01052294;XM_013512778;XM_013512779 XP_013368232;XP_013368233 MODEL 8771992 protein-coding Tpm4 tropomyosin 4 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN platelet formation (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); asbestosis (ortholog); Esophageal Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955524 1419061 1432114 - 102022847 AGCD01068749;GBCC01000148;GBCQ01010124;XM_013507272 XP_013362726 MODEL 8906041 protein-coding Chchd6 coiled-coil-helix-coiled-coil-helix domain containing 6 INVOLVED IN cristae formation (ortholog); DNA damage response (ortholog); PARTICIPATES IN mitochondrial protein import pathway; FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955429 16546397 16786139 - 102022626 AGCD01028834;AGCD01028835;AGCD01028836;GBDJ01187901;XM_005387259;XM_013515549;XM_013515550;XM_013515551;XM_013515552 XP_005387316;XP_013371003;XP_013371004;XP_013371005;XP_013371006 MODEL 8922352 protein-coding Tie1 tyrosine kinase with immunoglobulin like and EGF like domains 1 INVOLVED IN aortic valve morphogenesis (ortholog); blood vessel development (ortholog); branching involved in lymph vessel morphogenesis (ortholog); ASSOCIATED WITH Lymphatic Malformation 11 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955537 2894913 2914284 + 102024611 AGCD01070939;GBDK01005466;XM_005410646;XM_005410647 XP_005410703;XP_005410704 MODEL 8830285 protein-coding Gpbp1l1 GC-rich promoter binding protein 1 like 1 NW_004955464 12601373 12659687 + 102025987 AGCD01050210;AGCD01050211;AGCD01050212;AGCD01050213;AGCD01050214;GBDJ01275632;XM_005398693;XM_013521584;XM_013521585 XP_005398750;XP_013377038;XP_013377039 MODEL 8875471 protein-coding LOC102010044 ribosomal large subunit pseudouridine synthase B-like NW_004955412 5260904 5261677 - 102010044 AGCD01012623;GBDF01280111;GBDF01280112;XM_013511125 XP_013366579 MODEL 8832916 protein-coding Fjx1 four-jointed box kinase 1 INVOLVED IN retina layer formation (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); FOUND IN extracellular space (ortholog) NW_004955422 10731004 10733522 - 102010064 AGCD01022743;AGCD01022744;GBBH01208613;XM_005384948 XP_005385005 MODEL 39134188 misc_rna 7SK 7SK RNA 8740113 protein-coding Wdr44 WD repeat domain 44 ENCODES a protein that exhibits molecular sequestering activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cytosolic ciliogenesis (ortholog); negative regulation of cilium assembly (ortholog); regulation of cell migration (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); microtubule (ortholog) NW_004955534 1492990 1599402 - 102017913 AGCD01070498;AGCD01070499;AGCD01070500;AGCD01070501;AGCD01070502;AGCD01070503;GBCB01089438;XM_005410462 XP_005410519 MODEL 39131702 rrna 5S_rRNA 5S ribosomal RNA 8852135 protein-coding Dnajb8 DnaJ heat shock protein family (Hsp40) member B8 ENCODES a protein that exhibits protein folding chaperone (ortholog); protein-folding chaperone binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of inclusion body assembly (ortholog); protein folding (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955429 15349346 15350343 + 102025384 AGCD01028804;GBDF01011338;XM_005387042 XP_005387099 MODEL 9002611 protein-coding LOC102022458 translation initiation factor IF-2-like NW_004955405 16186365 16195618 + 102022458 AGCD01004963;GBDF01277426;XM_005374686 XP_005374743 MODEL 8868724 protein-coding Kif26b kinesin family member 26B INVOLVED IN establishment of cell polarity (ortholog); positive regulation of cell-cell adhesion (ortholog); ureteric bud invasion (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog) NW_004955406 8289774 8738131 + 102009798 AGCD01005801;AGCD01005802;AGCD01005803;AGCD01005804;AGCD01005805;AGCD01005806;AGCD01005807;GBBH01168941;XM_005374788;XM_013520421;XM_013520424 XP_005374845;XP_013375875;XP_013375878 MODEL 8923130 protein-coding Gem GTP binding protein overexpressed in skeletal muscle ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN chromosome organization (ortholog); metaphase chromosome alignment (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH glaucoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); midbody (ortholog); mitotic spindle (ortholog) NW_004955417 10475967 10486879 - 102024564 AGCD01018071;GBCE01034424;GBDI01358204;XM_013512843 XP_013368297 MODEL 8904518 protein-coding Ttk TTK protein kinase ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN female meiosis chromosome segregation (ortholog); meiotic spindle assembly checkpoint signaling (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); kinetochore (ortholog) NW_004955502 7824194 7866879 + 102009298 AGCD01064462;AGCD01064463;GBDF01089086;XM_005406915;XM_005406916;XM_005406917 XP_005406972;XP_005406973;XP_005406974 MODEL 10183550 ncrna LOC106150092 uncharacterized LOC106150092 NW_004955464 1059233 1061237 - 106150092 AGCD01049944;GBDF01137944;XR_001236698 MODEL 8859072 protein-coding Bank1 B cell scaffold protein with ankyrin repeats 1 ENCODES a protein that exhibits phospholipase binding (ortholog); protease binding (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN B cell activation (ortholog); negative regulation of B cell activation (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH autoimmune thyroiditis (ortholog); diffuse scleroderma (ortholog); Hashimoto Disease (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955496 6267618 6511195 - 102030212 AGCD01062366;AGCD01062367;GBDI01294378;XM_013505420;XM_013505421 XP_013360874;XP_013360875 MODEL 10245662 protein-coding LOC106147115 uncharacterized LOC106147115 NW_004955520 1874728 1876712 + 106147115 AGCD01068064;GBDF01260482;GBDJ01219618;XM_013507027 XP_013362481 MODEL 8783801 pseudo LOC102019964 chromatin modification-related protein MEAF6 pseudogene NW_004955555 1719514 1720177 + 102019964 AGCD01073097 MODEL 9063119 protein-coding LOC102015067 myosin regulatory light polypeptide 9 NW_004955402 7255139 7264599 - 102015067 AGCD01000170;GBDI01010726;XM_005372653;XM_005372654 XP_005372710;XP_005372711 MODEL 8958562 protein-coding Ptges3 prostaglandin E synthase 3 ENCODES a protein that exhibits DNA polymerase binding (ortholog); enzyme binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN cell population proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955458 4203075 4209967 - 102013802 AGCD01047385;GBDI01002083;GBDJ01074687;XM_005397329 XP_005397386 MODEL 8710588 protein-coding Sez6l seizure related 6 homolog like INVOLVED IN activation of protein kinase C activity (ortholog); adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955455 816129 992776 + 102013250 AGCD01045565;AGCD01045566;AGCD01045567;GBDF01112713;XM_005396140;XM_013520286 XP_005396197;XP_013375740 MODEL 8773163 protein-coding Rfpl4b ret finger protein like 4B NW_004955526 4242108 4253095 - 102013207 AGCD01069364;XM_013507355 XP_013362809 MODEL 8959460 protein-coding Trpv4 transient receptor potential cation channel subfamily V member 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); ATP export (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 5 (ortholog); Auditory Neuropathy (ortholog); autosomal dominant distal hereditary motor neuronopathy (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) NW_004955455 8744865 8781644 + 102018566 AGCD01045908;AGCD01045909;GBCQ01123903;XM_005396446;XM_005396447;XM_013520488 XP_005396503;XP_005396504;XP_013375942 MODEL 8731210 protein-coding Afg2b AAA ATPase AFG2B ENCODES a protein that exhibits identical protein binding (ortholog); preribosome binding (ortholog); INVOLVED IN DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH Autosomal Recessive Nonsyndromic Deafness 119 (ortholog); genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH HEARING LOSS AND SPASTICITY (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); spindle (ortholog) NW_004955409 8031094 8049477 - 102025769 AGCD01009375;AGCD01009376;AGCD01009377;GBBH01209720;GBCQ01066797;XM_005377148 XP_005377205 MODEL 9055392 protein-coding LOC102024155 zinc finger protein 709-like NW_004955432 4485530 4494277 + 102024155 AGCD01030722;AGCD01030723;GBDF01195694;XM_013515914 XP_013371368 MODEL 8721617 pseudo LOC102003523 dimethylaniline monooxygenase [N-oxide-forming] 5-like NW_004955462 10251055 10272845 - 102003523 AGCD01049359;AGCD01049360 MODEL 9021890 pseudo LOC102007053 protein kinase C iota type pseudogene NW_004955530 521029 523694 + 102007053 AGCD01069854;XM_005410110 MODEL 8966444 protein-coding Plekha7 pleckstrin homology domain containing A7 ENCODES a protein that exhibits delta-catenin binding (ortholog); INVOLVED IN cell-cell adhesion mediated by cadherin (ortholog); epithelial cell-cell adhesion (ortholog); pore complex assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH angle-closure glaucoma (ortholog); Cardiac Fibrosis (ortholog); cleft lip (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); centrosome (ortholog) NW_004955414 31655391 31784009 - 102006236 AGCD01015759;AGCD01015760;GBCE01009822;XM_005380369;XM_013511964;XM_013511965;XM_013511966;XM_013511967 XP_005380426;XP_013367418;XP_013367419;XP_013367420;XP_013367421 MODEL 39133333 snrna U4 U4 spliceosomal RNA 9014804 protein-coding Fam72a family with sequence similarity 72 member A INVOLVED IN positive regulation of apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955406 41788278 41801141 - 102017629 AGCD01006692;GBDF01115968;XM_005375387;XM_013523086 XP_005375444;XP_013378540 MODEL 10285507 protein-coding Alg14 ALG14 UDP-N-acetylglucosaminyltransferase subunit ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 15 (ortholog); congenital myopathy (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); UDP-N-acetylglucosamine transferase complex (ortholog) NW_004955435 162570 273924 - 106146266 AGCD01032715;AGCD01032716;AGCD01032717;AGCD01032718;AGCD01032719;AGCD01032720;GBDK01276824;XM_013516477;XM_013516478;XM_013516479;XM_013516480;XM_013516481 XP_013371931;XP_013371932;XP_013371933;XP_013371934;XP_013371935 MODEL 39131717 snrna U1 U1 spliceosomal RNA 8929653 protein-coding LOC102019674 translation initiation factor IF-2-like NW_004955410 9633405 9658285 - 102019674 AGCD01010768;AGCD01010769;AGCD01010770;GBDI01315759;XM_013510683;XM_013510684;XM_013510685;XM_013510686;XR_001232768;XR_001232769 XP_013366137;XP_013366138;XP_013366139;XP_013366140 MODEL 39134501 misc_rna 7SK 7SK RNA 8997546 pseudo LOC102021462 translocation protein SEC62 pseudogene NW_004955425 16717873 16720163 - 102021462 AGCD01025619;XM_005386094 MODEL 8856765 protein-coding Kif27 kinesin family member 27 INVOLVED IN cilium assembly (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ventricular system development (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN cilium (ortholog) NW_004955432 3298427 3441116 + 102007686 AGCD01030647;AGCD01030648;AGCD01030649;AGCD01030650;AGCD01030651;AGCD01030652;AGCD01030653;AGCD01030654;AGCD01030655;AGCD01030656;AGCD01030657;AGCD01030658;AGCD01030659;AGCD01030660;AGCD01030661;AGCD01030662;GBBH01213959;XM_005387948;XM_005387957;XM_013515989;XM_013515990;XM_013515991;XM_013515992;XM_013515993;XM_013515994;XM_013515995;XM_013515996;XM_013515997 XP_005388005;XP_005388014;XP_013371443;XP_013371444;XP_013371445;XP_013371446;XP_013371447;XP_013371448;XP_013371449;XP_013371450;XP_013371451 MODEL 8795598 protein-coding Pdk1 pyruvate dehydrogenase kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor signaling pathway (ortholog); hypoxia-inducible factor-1alpha signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; Fc epsilon receptor mediated signaling pathway; pyruvate metabolic pathway; FOUND IN mitochondrion (ortholog); plasma membrane (ortholog); pyruvate dehydrogenase complex (ortholog) NW_004955449 2546790 2582402 - 102013461 AGCD01041829;AGCD01041830;GBDF01054828;XM_005393209;XM_005393210;XM_005393211;XM_005393212;XM_005393213 XP_005393266;XP_005393267;XP_005393268;XP_005393269;XP_005393270 MODEL 8957214 protein-coding Apof apolipoprotein F INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); triglyceride metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN extracellular space (ortholog) NW_004955458 3973734 3978312 - 102009020 AGCD01047359;GBDI01064583;GBDK01007513;XM_005397312 XP_005397369 MODEL 9059192 protein-coding LOC102006012 C-type lectin domain family 10 member A NW_004955467 9788155 9791911 + 102006012 AGCD01051525;GBDK01397253;XM_005399570 XP_005399627 MODEL 8838738 protein-coding Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit ENCODES a protein that exhibits identical protein binding (ortholog); tRNA (adenine(9)-N1)-methyltransferase activity (ortholog); tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial RNA 5'-end processing (ortholog); mitochondrial tRNA 3'-end processing (ortholog); mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 30 (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955427 3133225 3137070 + 102028659 AGCD01026918;GBCB01042255;XM_005386322;XM_005386323;XM_013515081 XP_005386379;XP_005386380;XP_013370535 MODEL 39132360 snrna U6 U6 spliceosomal RNA 8960721 protein-coding LOC102017315 low-density lipoprotein receptor-related protein 1-like NW_004955463 4748486 4819058 - 102017315 AGCD01049615;AGCD01049616;GBDF01268713;XM_013521487 XP_013376941 MODEL 8707822 protein-coding Asmt acetylserotonin O-methyltransferase ENCODES a protein that exhibits acetylserotonin O-methyltransferase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN melatonin biosynthetic process (ortholog); negative regulation of male gonad development (ortholog); PARTICIPATES IN methionine cycle/metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Wilson disease (ortholog) NW_004955499 1131637 1151861 + 102009198 AGCD01063323;AGCD01063324;AGCD01063325;XM_005406516 XP_005406573 MODEL 8931997 protein-coding Chchd7 coiled-coil-helix-coiled-coil-helix domain containing 7 ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955454 15284114 15286761 + 102012728 AGCD01045491;GBBH01141590;GBDK01186701;XM_013520257 XP_013375711 MODEL 9038288 ncrna LOC102010838 uncharacterized LOC102010838 NW_004955440 18922189 18925290 - 102010838 AGCD01036623;GBDF01266858;XR_262046 MODEL 8931821 protein-coding Hells helicase, lymphoid specific ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); chromatin remodeling (ortholog); chromosomal DNA methylation maintenance following DNA replication (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleus (ortholog); pericentric heterochromatin (ortholog) NW_004955507 995389 1034852 + 102005066 AGCD01065498;AGCD01065499;AGCD01065500;GBDJ01031800;XM_005407530;XM_013506206 XP_005407587;XP_013361660 MODEL 39131531 protein-coding FJX1 four-jointed box kinase 1 39132428 rrna 5S_rRNA 5S ribosomal RNA 39134189 misc_rna 7SK 7SK RNA 8939353 pseudo LOC102003534 stAR-related lipid transfer protein 4 pseudogene NW_004955474 6726759 6727385 + 102003534 AGCD01054486;XM_005401390 MODEL 8755658 ncrna LOC102015069 uncharacterized LOC102015069 NW_004955450 6656256 6664956 - 102015069 AGCD01042523;GBBH01039153;XR_001235837;XR_262534;XR_262535;XR_262537 MODEL 8796385 protein-coding LOC102019966 sialic acid-binding Ig-like lectin 14 NW_004955558 1309181 1311821 - 102019966 AGCD01073434;GBDI01088489;XM_013508901;XR_001232335 XP_013364355 MODEL 9046352 protein-coding Banp BTG3 associated nuclear protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955541 2169303 2256779 + 102029225 AGCD01071404;AGCD01071405;AGCD01071406;GBDF01122106;XM_005411011;XM_005411012;XM_005411013;XM_005411014;XM_013507967;XM_013507969;XM_013507970 XP_005411068;XP_005411069;XP_005411070;XP_005411071;XP_013363421;XP_013363423;XP_013363424 MODEL 8973175 protein-coding E2f7 E2F transcription factor 7 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); hepatocyte differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955405 16148640 16187272 - 102015172 AGCD01004963;GBDF01076465;XM_005374349;XM_005374351;XM_013517776 XP_005374406;XP_005374408;XP_013373230 MODEL 39131551 protein-coding PTGES3L prostaglandin E synthase 3 like 9022049 protein-coding Iqsec2 IQ motif and Sec7 domain ArfGEF 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of long-term synaptic depression (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH Atkin Syndrome (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); photoreceptor ribbon synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955475 285977 369380 - 102013285 AGCD01054685;AGCD01054686;GBCQ01154978;GBDJ01235195;XM_005401487;XM_005401488;XM_013502863 XP_005401544;XP_005401545;XP_013358317 MODEL 8804036 protein-coding Sez6l2 seizure related 6 homolog like 2 INVOLVED IN activation of protein kinase C activity (ortholog); adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); spondylocostal dysostosis 5 (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN endoplasmic reticulum (ortholog); neuronal cell body (ortholog) NW_004955493 7059865 7080524 + 102004291 AGCD01061154;GBCE01082309;XM_005405222;XM_005405223;XM_013504789;XM_013504790 XP_005405279;XP_005405280;XP_013360243;XP_013360244 MODEL 8810341 protein-coding LOC102005250 olfactory receptor 51L1-like NW_004955414 21095282 21096259 - 102005250 AGCD01015407;XM_005380492 XP_005380549 MODEL 8754045 protein-coding Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif 14 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); osteoarthritis (ortholog); primary progressive multiple sclerosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955437 20592278 20664075 - 102010945 AGCD01034877;GBDK01317004;XM_005390048;XM_005390049;XM_005390050;XM_005390051;XR_001235098 XP_005390105;XP_005390106;XP_005390107;XP_005390108 MODEL 39131703 rrna 5S_rRNA 5S ribosomal RNA 9018779 protein-coding Gpc1 glypican 1 ENCODES a protein that exhibits collagen V binding (ortholog); copper ion binding (ortholog); fibroblast growth factor binding (ortholog); INVOLVED IN heparan sulfate proteoglycan catabolic process (ortholog); myelin assembly (ortholog); negative regulation of fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN extracellular matrix (ortholog); membrane raft (ortholog); neuronal cell body (ortholog) NW_004955542 947556 968295 - 102012898 AGCD01071485;AGCD01071486;GBBH01089560;GBCB01002513;XM_013508117 XP_013363571 MODEL 8762758 pseudo LOC102007056 protein CDV3 pseudogene NW_004955437 733515 734520 - 102007056 AGCD01034158 MODEL 8921769 protein-coding Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); misfolded protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN B cell differentiation (ortholog); ERAD pathway (ortholog); positive regulation of immunoglobulin production (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955410 12814993 12820852 + 102012070 AGCD01010872;AGCD01010873;GBCE01004384;XM_005377307 XP_005377364 MODEL 8846577 protein-coding Gemin2 gem nuclear organelle associated protein 2 INVOLVED IN protein-containing complex assembly (ortholog); spliceosomal snRNP assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) NW_004955409 22142082 22153699 - 102016352 AGCD01010021;AGCD01010022;GBDK01323617;GBDK01323624;XM_013510473;XM_013510474 XP_013365927;XP_013365928 MODEL 8784743 protein-coding Ttl tubulin tyrosine ligase ENCODES a protein that exhibits tubulin-tyrosine ligase activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); positive regulation of mitotic cell cycle (ortholog); post-translational protein modification (ortholog); FOUND IN spindle microtubule (ortholog) NW_004955470 1747217 1774512 - 102027289 AGCD01052654;GBDF01280281;XM_005400605;XM_013522827 XP_005400662;XP_013378281 MODEL 8976262 protein-coding Plekha8 pleckstrin homology domain containing A8 ENCODES a protein that exhibits ceramide binding (ortholog); cerebroside transfer activity (ortholog); glycolipid binding (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); globoside biosynthetic process (ortholog); lipid transport (ortholog); FOUND IN nucleoplasm (ortholog); trans-Golgi network (ortholog) NW_004955410 31327015 31386671 + 102017751 AGCD01011321;AGCD01011322;AGCD01011323;GBDF01087012;XM_005377490;XM_013510617 XP_005377547;XP_013366071 MODEL 39133925 misc_rna 7SK 7SK RNA 10158841 ncrna LOC106147116 uncharacterized LOC106147116 NW_004955520 3521373 3522994 - 106147116 AGCD01068105;GBDI01078833;XR_001231871 MODEL 8915624 pseudo LOC102019680 anaphase-promoting complex subunit 10 pseudogene NW_004955411 24699208 24699455 - 102019680 AGCD01012136 MODEL 8817488 ncrna LOC102021468 uncharacterized LOC102021468 NW_004955429 22067479 22079189 + 102021468 AGCD01029017;GBDK01379872;XR_001234457;XR_001234458 MODEL 8925949 protein-coding Blmh bleomycin hydrolase ENCODES a protein that exhibits aminopeptidase activity (ortholog); identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN response to toxic substance (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955481 3031283 3078678 + 102003869 AGCD01056891;AGCD01056892;AGCD01056893;GBDF01058051;XM_005402657;XM_005402658;XM_005402659 XP_005402714;XP_005402715;XP_005402716 MODEL 39134502 misc_rna 7SK 7SK RNA 8868081 protein-coding Tpmt thiopurine S-methyltransferase ENCODES a protein that exhibits S-adenosyl-L-methionine binding (ortholog); thiopurine S-methyltransferase activity (ortholog); INVOLVED IN response to testosterone (ortholog); xenobiotic metabolic process (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); alopecia (ortholog); autism spectrum disorder (ortholog) NW_004955483 8052867 8072235 + 102019173 AGCD01057824;GBDK01177579;XM_005403393;XM_013503824;XM_013503825;XM_013503826 XP_005403450;XP_013359278;XP_013359279;XP_013359280 MODEL 9008503 protein-coding Atp6v1c2 ATPase H+ transporting V1 subunit C2 ENCODES a protein that exhibits identical protein binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Distal Renal Tubular Acidosis (ortholog) NW_004955487 5711235 5735081 + 102003031 AGCD01059343;AGCD01059344;AGCD01059345;GBCQ01073152;XM_005404415;XM_005404416;XM_013504367;XM_013504368;XM_013504369;XM_013504370;XM_013504371;XM_013504372 XP_005404472;XP_005404473;XP_013359821;XP_013359822;XP_013359823;XP_013359824;XP_013359825;XP_013359826 MODEL 9063518 protein-coding Rft1 RFT1 glycolipid translocator homolog ENCODES a protein that exhibits glycolipid floppase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); glycolipid translocation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation In (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955430 3055766 3096501 - 102029213 AGCD01029191;GBDI01215765;XM_005387364 XP_005387421 MODEL 8743113 protein-coding Tifa TRAF interacting protein with forkhead associated domain INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); innate immune response (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoplasm (ortholog) NW_004955457 14444811 14460168 + 102020529 AGCD01047073;GBDF01293417;XM_005397102;XM_005397103;XR_262952;XR_262953 XP_005397159;XP_005397160 MODEL 8863415 protein-coding LOC102018085 protein FAM205A-like NW_004955472 1304677 1310702 + 102018085 AGCD01053385;GBDF01086556;XM_005401038;XM_005401039;XM_005401040 XP_005401095;XP_005401096;XP_005401097 MODEL 8797604 protein-coding Kif28 Kinesin-like protein KIF28P INVOLVED IN mitochondrion organization (ortholog); organelle transport along microtubule (ortholog); FOUND IN mitochondrial membrane (ortholog) NW_004955406 9618041 9687626 - 102011836 AGCD01005829;AGCD01005830;AGCD01005831;GBCC01020699;XM_005374794 XP_005374851 MODEL 8930669 protein-coding Pdk2 pyruvate dehydrogenase kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); cellular response to reactive oxygen species (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) NW_004955451 11547660 11559266 - 102016337 AGCD01043359;GBBH01142102;XM_005394182 XP_005394239 MODEL 8768395 ncrna LOC102012454 uncharacterized LOC102012454 NW_004955426 21276896 21279599 - 102012454 AGCD01026583;GBDF01235356;XR_261214 MODEL 39132361 snrna U6 U6 spliceosomal RNA 8922983 protein-coding Cat catalase ENCODES a protein that exhibits aminoacylase activity (ortholog); antioxidant activity (ortholog); catalase activity (ortholog); INVOLVED IN response to auditory stimulus; aerobic respiration (ortholog); cellular detoxification of hydrogen peroxide (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; tryptophan metabolic pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acatalasia (ortholog); acne (ortholog); FOUND IN extracellular space (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) NW_004955422 11783973 11826970 - 102017674 AGCD01022765;AGCD01022766;AGCD01022767;AGCD01022768;GBDI01005261;XM_005384146 XP_005384203 MODEL 8745584 ncrna LOC102015070 uncharacterized LOC102015070 NW_004955404 29399194 29405605 - 102015070 AGCD01003975;GBCQ01066578;XR_259326 MODEL 8875385 protein-coding Trmt11 tRNA methyltransferase 11 ENCODES a protein that exhibits tRNA (guanine(10)-N2)-methyltransferase activity (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); Esophageal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); tRNA (m2G10) methyltransferase complex (ortholog) NW_004955436 7274848 7318762 + 102004850 AGCD01033704;GBDI01353599;XM_005389162;XM_005389163;XM_013516690 XP_005389219;XP_005389220;XP_013372144 MODEL 8878325 protein-coding LOC102024157 vomeronasal type-2 receptor 116-like NW_004955524 574634 590185 - 102024157 AGCD01068685;XM_013507187 XP_013362641 MODEL 8915004 pseudo LOC102017316 ankyrin repeat domain-containing protein 27-like NW_004955465 1179544 1184382 - 102017316 AGCD01050336 MODEL 8889785 protein-coding Afg3l2 AFG3 like matrix AAA peptidase subunit 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN axonogenesis (ortholog); calcium import into the mitochondrion (ortholog); cellular response to glutathione (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); dystonia (ortholog); fundus dystrophy (ortholog); FOUND IN m-AAA complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955402 1037414 1069165 + 102012484 AGCD01000045;AGCD01000046;GBCE01137899;GBDF01126909;XM_013513870;XM_013513903 XP_013369324;XP_013369357 MODEL 8970434 ncrna LOC102022464 uncharacterized LOC102022464 NW_004955407 26752371 26760950 - 102022464 AGCD01007537;GBDF01242626;XR_001231703;XR_259588 MODEL 39133334 snrna U4 U4 spliceosomal RNA 9064255 ncrna LOC102005254 uncharacterized LOC102005254 NW_004955417 12247480 12249907 + 102005254 AGCD01018159;GBDF01276663;XR_260475 MODEL 10138059 ncrna LOC106150093 uncharacterized LOC106150093 NW_004955464 7696776 7698418 + 106150093 AGCD01050067;GBDF01090347;XR_001236699 MODEL 8779950 protein-coding LOC102010839 cytochrome P450 2S1 ENCODES a protein that exhibits hydro-lyase activity (ortholog); monooxygenase activity (ortholog); thromboxane-A synthase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); prostaglandin metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); psoriasis (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955555 167634 183572 + 102010839 AGCD01073024;GBDK01317297;XM_005412321 XP_005412378 MODEL 8848731 protein-coding Helq helicase, POLQ like ENCODES a protein that exhibits single-stranded 3'-5' DNA helicase activity (ortholog); INVOLVED IN DNA double-strand break processing involved in repair via single-strand annealing (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN nucleus (ortholog); site of DNA damage (ortholog) NW_004955474 6280955 6322702 + 102028411 AGCD01054467;AGCD01054468;AGCD01054469;AGCD01054470;AGCD01054471;GBDF01119561;XM_005401382;XM_005401384;XM_013502753;XM_013502754;XM_013502755;XR_001230734 XP_005401439;XP_005401441;XP_013358207;XP_013358208;XP_013358209 MODEL 8756323 protein-coding Alg2 ALG2 alpha-1,3/1,6-mannosyltransferase ENCODES a protein that exhibits alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ii (ortholog); congenital disorder of glycosylation type II (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog) NW_004955419 26423243 26427384 + 102015523 AGCD01020408;GBCQ01093153;XM_005382821 XP_005382878 MODEL 8814827 ncrna LOC102003538 uncharacterized LOC102003538 NW_004955476 203227 208111 + 102003538 AGCD01055192;GBDI01270308;XR_263615 MODEL 8726679 pseudo LOC102010047 nucleolar and spindle-associated protein 1 pseudogene NW_004955413 13435713 13437079 - 102010047 AGCD01014015 MODEL 8876729 pseudo LOC102019686 olfactory receptor 51A7-like NW_004955414 20498737 20499672 - 102019686 AGCD01015376;XR_260184 MODEL 8785612 protein-coding Wdr45 WD repeat domain 45 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); CEREBRAL-CEREBELLAR-COLOBOMA SYNDROME, X-LINKED (ortholog); Developmental Disabilities (ortholog); FOUND IN phagophore assembly site (ortholog) NW_004955543 597796 604163 - 102006712 AGCD01071593;GBDI01078234;XM_005411316;XM_005411317;XM_005411319;XM_013508149 XP_005411373;XP_005411374;XP_005411376;XP_013363603 MODEL 8802989 protein-coding Bap1 BRCA1 associated deubiquitinase 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cysteine-type deubiquitinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); common myeloid progenitor cell proliferation (ortholog); erythrocyte differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adrenocortical carcinoma (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955430 2391970 2400645 - 102015750 AGCD01029165;GBDF01009197;XM_005387315;XM_013515572 XP_005387372;XP_013371026 MODEL 8797824 pseudo LOC102018086 glyceraldehyde-3-phosphate dehydrogenase pseudogene NW_004955472 5347652 5348320 - 102018086 AGCD01053576 MODEL 39132430 rrna 5S_rRNA 5S ribosomal RNA 8999396 protein-coding Fam76a family with sequence similarity 76 member A FOUND IN nucleoplasm (ortholog) NW_004955452 6932229 6963044 + 102008812 AGCD01044128;AGCD01044129;GBDF01081432;XM_005394926 XP_005394983 MODEL 39134190 misc_rna 7SK 7SK RNA 8920272 protein-coding Fkbp10 FKBP prolyl isomerase 10 ENCODES a protein that exhibits FK506 binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN aorta morphogenesis (ortholog); collagen fibril organization (ortholog); extracellular matrix assembly (ortholog); ASSOCIATED WITH Bruck syndrome (ortholog); Bruck Syndrome 1 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955451 16025008 16031950 + 102006529 AGCD01043648;GBDJ01004397;GBDJ01004405;XM_005394418 XP_005394475 MODEL 8850709 protein-coding Hnrnpc heterogeneous nuclear ribonucleoprotein C ENCODES a protein that exhibits deaminase binding (ortholog); enzyme inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of mRNA modification (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); atherosclerosis (ortholog); autosomal dominant intellectual developmental disorder 74 (ortholog); FOUND IN actin cytoskeleton (ortholog); catalytic step 2 spliceosome (ortholog); cytosol (ortholog) NW_004955550 1949975 2002297 - 102009885 AGCD01072599;AGCD01072600;GBBH01001827;XM_005412104;XM_005412105;XM_005412106;XM_013508584 XP_005412161;XP_005412162;XP_005412163;XP_013364038 MODEL 39131816 snrna U1 U1 spliceosomal RNA 8860273 pseudo LOC102017320 ubiquitin-conjugating enzyme E2 variant 1-like NW_004955466 4725823 4786385 - 102017320 AGCD01050837;AGCD01050838;AGCD01050839;AGCD01050840;AGCD01050841;AGCD01050842;AGCD01050843;AGCD01050844;AGCD01050845;AGCD01050846;AGCD01050847 MODEL 8906626 pseudo LOC102022468 NHP2-like protein 1 pseudogene NW_004955408 13974627 13976107 - 102022468 AGCD01008379 MODEL 39133926 misc_rna 7SK 7SK RNA 8835147 protein-coding Trpv6 transient receptor potential cation channel subfamily V member 6 ENCODES a protein that exhibits calcium channel activity (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion import (ortholog); calcium ion import across plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH genetic disease (ortholog); gestational diabetes (ortholog); hyperparathyroidism (ortholog); FOUND IN calcium channel complex (ortholog); plasma membrane (ortholog) NW_004955494 820801 835931 - 102004942 AGCD01061385;AGCD01061386;GBCE01039170;XM_005405387 XP_005405444 MODEL 8931473 protein-coding Apoh apolipoprotein H ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); lipid binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); blood coagulation, intrinsic pathway (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH antiphospholipid syndrome (ortholog); arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular space (ortholog) NW_004955478 5612258 5626061 - 102007763 AGCD01055880;GBDJ01386248;XM_005402147 XP_005402204 MODEL 8864214 ncrna LOC102019971 uncharacterized LOC102019971 NW_004955448 7868274 7959819 - 102019971 AGCD01041427;AGCD01041428;AGCD01041429;AGCD01041430;AGCD01041431;AGCD01041432;GBCQ01031145;XR_001235792;XR_262463 MODEL 39134503 misc_rna 7SK 7SK RNA 8752519 protein-coding Blnk B cell linker ENCODES a protein that exhibits enzyme binding (ortholog); lipid binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 4 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955507 2398694 2466461 - 102015652 AGCD01065587;AGCD01065588;AGCD01065589;GBBH01092683;XM_005407570;XM_013506235;XM_013506236 XP_005407627;XP_013361689;XP_013361690 MODEL 8841448 protein-coding Ptgfr prostaglandin F receptor ENCODES a protein that exhibits prostaglandin F receptor activity (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Airway Obstruction (ortholog); endometriosis (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955423 14768208 14816462 - 102010499 AGCD01023777;AGCD01023778;AGCD01023779;GBCQ01179014;XM_005385183;XM_013514554;XM_013514555 XP_005385240;XP_013370008;XP_013370009 MODEL 8813303 protein-coding Chct1 CHD1 helical C-terminal domain containing 1 FOUND IN nucleus (ortholog) NW_004955451 1709938 1719278 + 102004882 AGCD01042979;AGCD01042980;GBDF01003863;XM_013519151 XP_013374605 MODEL 39132362 snrna U6 U6 spliceosomal RNA 39131704 rrna 5S_rRNA 5S ribosomal RNA 8732278 ncrna LOC102015071 uncharacterized LOC102015071 NW_004955405 26819065 26833342 + 102015071 AGCD01005205;GBDF01249980;XR_259397 MODEL 9035728 ncrna LOC102024158 uncharacterized LOC102024158 NW_004955435 18613685 18623159 + 102024158 AGCD01033408;GBDF01076618;XR_261722 MODEL 8991062 pseudo LOC102018089 methyltransferase-like protein 17, mitochondrial NW_004955416 190699 192939 + 102018089 AGCD01016780 MODEL 10241662 protein-coding LOC106150094 basic salivary proline-rich protein 1-like NW_004955464 6285341 6285841 - 106150094 AGCD01050023;GBCQ01044540;XM_013521721 XP_013377175 MODEL 8915713 protein-coding LOC102021470 olfactory receptor 8H1-like NW_004955511 5092184 5093131 + 102021470 AGCD01066548;XM_005408085 XP_005408142 MODEL 8740356 protein-coding LOC102010840 serine protease 29-like NW_004955442 15998729 16000624 + 102010840 AGCD01037890;GBBH01115240;XM_005391588 XP_005391645 MODEL 10178923 pseudo LOC106147117 60S ribosomal protein L21 pseudogene NW_004955520 1013203 1014582 - 106147117 AGCD01068040 MODEL 8755729 pseudo LOC102017322 motile sperm domain-containing protein 2 pseudogene NW_004955468 9584209 9587226 - 102017322 AGCD01052050 MODEL 8735589 protein-coding Helt helt bHLH transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN central nervous system development (ortholog); GABAergic neuron differentiation in basal ganglia (ortholog); gene expression (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955403 23996488 23998290 - 102003399 AGCD01002266;GBDF01184267;XM_005373480;XM_005373481 XP_005373537;XP_005373538 MODEL 9021175 protein-coding Tpo thyroid peroxidase ENCODES a protein that exhibits iodide peroxidase activity (ortholog); INVOLVED IN cellular response to nitric oxide (ortholog); embryonic hemopoiesis (ortholog); response to lipid (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH autoimmune disease (ortholog); congenital hypothyroidism (ortholog); Congenital Nongoitrous Hypothyroidism (ortholog); FOUND IN cell surface (ortholog) NW_004955487 485029 530287 - 102007022 AGCD01059218;AGCD01059219;AGCD01059220;AGCD01059221;GBDI01010368;GBDI01010369;XM_005404339 XP_005404396 MODEL 8753593 protein-coding Atp6v1d ATPase H+ transporting V1 subunit D ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN cilium assembly (ortholog); protein localization to cilium (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955466 2855597 2869319 + 102017643 AGCD01050769;GBDF01001216;XM_005399088;XM_005399089 XP_005399145;XP_005399146 MODEL 8866819 protein-coding Iqsec3 IQ motif and Sec7 domain ArfGEF 3 INVOLVED IN activation of GTPase activity (ortholog); postsynapse organization (ortholog); regulation of small GTPase mediated signal transduction (ortholog); FOUND IN cytosol (ortholog); GABA-ergic synapse (ortholog); glycinergic synapse (ortholog) NW_004955454 6978317 7079490 - 102028823 AGCD01045274;AGCD01045275;AGCD01045276;GBDF01289579;XM_013520013 XP_013375467 MODEL 8956145 protein-coding Kif2a kinesin family member 2A ENCODES a protein that exhibits microtubule binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); dendritic transport (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations (ortholog); complex cortical dysplasia with other brain malformations 3 (ortholog); genetic disease (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955446 6244547 6279080 - 102025854 AGCD01040090;AGCD01040091;GBDK01281069;XM_005392643;XM_005392645;XM_005392646 XP_005392700;XP_005392702;XP_005392703 MODEL 8788169 protein-coding Sf1 splicing factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN Leydig cell differentiation (ortholog); male sex determination (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH ischemia (ortholog); melanoma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955422 20391340 20406555 + 102028550 AGCD01023078;AGCD01023079;GBCE01029052;GBDI01001163;XM_013514043;XM_013514044;XM_013514045;XM_013514046 XP_013369497;XP_013369498;XP_013369499;XP_013369500 MODEL 8856160 pseudo LOC102012457 charged multivesicular body protein 5-like NW_004955509 3240394 3241053 + 102012457 AGCD01066019 MODEL 8842478 protein-coding Trmt112 tRNA methyltransferase activator subunit 11-2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein methyltransferase activity (ortholog); tRNA methyltransferase activator activity (ortholog); INVOLVED IN peptidyl-glutamine methylation (ortholog); positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 20767599 20768505 + 102012548 AGCD01023086;GBDF01007908;XM_005384605 XP_005384662 MODEL 8870751 protein-coding Gpc2 glypican 2 INVOLVED IN neuron differentiation (ortholog); positive regulation of neuron projection development (ortholog); smoothened signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; FOUND IN endoplasmic reticulum (ortholog) NW_004955573 630859 637296 + 102025061 AGCD01074994;AGCD01074995;GBCE01101814;XM_013509490 XP_013364944 MODEL 8969247 protein-coding Wdr45b WD repeat domain 45B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); TSC1-TSC2 complex binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with Spastic Quadriplegia and Brain Abnormalities with or without Seizures (ortholog); FOUND IN cytosol (ortholog); lysosome (ortholog); phagophore assembly site (ortholog) NW_004955506 515364 556507 + 102006797 AGCD01065230;AGCD01065231;AGCD01065232;GBDF01081047;XM_005407188 XP_005407245 MODEL 8823225 protein-coding Afmid arylformamidase INVOLVED IN obsolete L-tryptophan catabolic process to L-kynurenine (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; FOUND IN cytoplasm (ortholog) NW_004955506 4351623 4379528 - 102009634 AGCD01065333;AGCD01065334;AGCD01065335;AGCD01065336;AGCD01065337;GBBH01011337;GBBH01166539;XM_005407384;XM_005407386 XP_005407441;XP_005407443 MODEL 8837185 protein-coding Gemin4 gem nuclear organelle associated protein 4 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); INVOLVED IN spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); cataract (ortholog); Developmental Disabilities (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955481 2294406 2301297 - 102026638 AGCD01056873;GBBH01131697;XM_005402640 XP_005402697 MODEL 8707748 protein-coding Chd1 chromodomain helicase DNA binding protein 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); gene expression (ortholog); host-mediated activation of viral transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); Colorectal Neoplasms (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN cytoplasm (ortholog); nuclear chromosome (ortholog); nucleus (ortholog) NW_004955418 14200618 14268361 + 102007339 AGCD01019069;GBBH01162092;GBCQ01088613;XM_005382216 XP_005382273 MODEL 8959897 protein-coding Fam76b family with sequence similarity 76 member B INVOLVED IN mRNA stabilization (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of macrophage activation (ortholog); FOUND IN nuclear speck (ortholog) NW_004955412 617089 664452 - 102010142 AGCD01012492;GBBH01082397;GBDF01126355;XM_013511049 XP_013366503 MODEL 8966735 protein-coding Plekhb1 pleckstrin homology domain containing B1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN regulation of cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN membrane (ortholog) NW_004955414 17826812 17840988 - 102014039 AGCD01015256;GBDI01000683;XM_005379942;XM_005379943;XM_005379944;XM_005379945;XM_005379946;XM_005379947 XP_005379999;XP_005380000;XP_005380001;XP_005380002;XP_005380003;XP_005380004 MODEL 8799422 protein-coding Alg3 ALG3 alpha-1,3- mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Id (ortholog); epilepsy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955420 23236686 23241936 + 102024119 AGCD01021237;GBDF01227510;XM_005383337 XP_005383394 MODEL 8826401 protein-coding LOC102003539 protocadherin beta-10 NW_004955415 12555720 12609335 - 102003539 AGCD01016200;AGCD01016201;AGCD01016202;AGCD01016203;AGCD01016204;AGCD01016205;AGCD01016206;GBCE01115691;GBDF01153200;XM_013512254 XP_013367708 MODEL 9027552 protein-coding Asmtl acetylserotonin O-methyltransferase like ASSOCIATED WITH acute myeloid leukemia (ortholog); myoepithelioma (ortholog); FOUND IN cytosol (ortholog) NW_004955499 1033926 1047018 - 102024358 AGCD01063306;AGCD01063307;AGCD01063308;GBCE01031982;GBDI01216735;XM_013505602 XP_013361056 MODEL 8751594 protein-coding E2f8 E2F transcription factor 8 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell cycle comprising mitosis without cytokinesis (ortholog); cell population proliferation (ortholog); chorionic trophoblast cell differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955476 197699 215227 - 102003762 AGCD01055192;GBDF01123925;XM_005401713;XM_005401714;XM_005401715;XM_013503012;XM_013503013 XP_005401770;XP_005401771;XP_005401772;XP_013358466;XP_013358467 MODEL 8858319 protein-coding Tigar TP53 induced glycolysis regulatory phosphatase ENCODES a protein that exhibits fructose-2,6-bisphosphate 2-phosphatase activity (ortholog); INVOLVED IN cellular response to cobalt ion (ortholog); cellular response to hypoxia (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955413 2129719 2153873 + 102029277 AGCD01013540;AGCD01013541;GBDF01122114;XM_005378727;XM_005378728 XP_005378784;XP_005378785 MODEL 8725117 protein-coding Rftn1 raftlin, lipid raft linker 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); dsRNA transport (ortholog); membrane raft assembly (ortholog); ASSOCIATED WITH glaucoma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); membrane raft (ortholog) NW_004955430 8605057 8801187 - 102028668 AGCD01029390;AGCD01029391;AGCD01029392;AGCD01029393;GBDF01187691;GBDJ01316097;XM_013515694 XP_013371148 MODEL 8744163 protein-coding LOC102010049 olfactory receptor 52H1-like NW_004955414 21628748 21631134 + 102010049 AGCD01015424;XM_005380100 XP_005380157 MODEL 8757580 protein-coding Pdk3 pyruvate dehydrogenase kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); hypoxia-inducible factor-1alpha signaling pathway (ortholog); peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease X-linked dominant 6 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955509 4809422 4888802 + 102018120 AGCD01066089;AGCD01066090;GBCE01085761;XM_005407844;XM_005407845;XM_005407846;XM_005407847;XM_005407848 XP_005407901;XP_005407902;XP_005407903;XP_005407904;XP_005407905 MODEL 8880958 protein-coding Apold1 apolipoprotein L domain containing 1 INVOLVED IN angiogenesis (ortholog); autophagosome-dependent secretion (ortholog); endothelial cell activation (ortholog); ASSOCIATED WITH Bleeding Disorder, Vascular-Type (ortholog); FOUND IN cell-cell junction (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955413 9682032 9685965 + 102029385 AGCD01013909;AGCD01013910;GBBH01192964;XM_005379640 XP_005379697 MODEL 8711058 ncrna LOC102007057 uncharacterized LOC102007057 NW_004955439 18083547 18090067 + 102007057 AGCD01036049;GBDK01269094;XR_001235223;XR_001235224 MODEL 39133335 snrna U4 U4 spliceosomal RNA 8893488 protein-coding Catip ciliogenesis associated TTC17 interacting protein INVOLVED IN actin filament polymerization (ortholog); cilium organization (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); spermatogenic failure 54 (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955453 15008225 15015030 - 102011837 AGCD01044880;GBBH01031850;XM_005395652 XP_005395709 MODEL 8887810 protein-coding Trrap transformation/transcription domain associated protein ENCODES a protein that exhibits chromatin binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 75 (ortholog); Developmental Delay with or without Dysmorphic Facies and Autism (ortholog); Developmental Disabilities (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955460 14641891 14761641 + 102003739 AGCD01048757;AGCD01048758;AGCD01048759;AGCD01048760;GBDF01050549;XM_005397925;XM_005397926;XM_005397928;XM_005397930;XM_013521171;XM_013521172;XM_013521173;XM_013521174;XM_013521175;XM_013521176;XM_013521177 XP_005397982;XP_005397983;XP_005397985;XP_005397987;XP_013376625;XP_013376626;XP_013376627;XP_013376628;XP_013376629;XP_013376630;XP_013376631 MODEL 8996682 protein-coding Kif2b kinesin family member 2B INVOLVED IN metaphase chromosome alignment (ortholog); microtubule depolymerization (ortholog); regulation of chromosome segregation (ortholog) NW_004955451 8528405 8530661 - 102020514 AGCD01043272;GBDF01007804;XM_005394091 XP_005394148 MODEL 8886290 ncrna LOC102005256 uncharacterized LOC102005256 NW_004955481 2964634 3031561 - 102005256 AGCD01056891;GBDF01045486;XR_001230937;XR_263772 MODEL 8921335 protein-coding Dnajc1 DnaJ heat shock protein family (Hsp40) member C1 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN protein folding (ortholog); regulation of protein secretion (ortholog); regulation of translation (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955429 6806456 6987579 + 102012989 AGCD01028565;AGCD01028566;AGCD01028567;AGCD01028568;AGCD01028569;AGCD01028570;AGCD01028571;AGCD01028572;AGCD01028573;GBCQ01068779;GBDF01119044;XM_013515403 XP_013370857 MODEL 8912857 protein-coding Ttll1 TTL family tubulin polyglutamylase complex subunit L1 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); cerebellar Purkinje cell differentiation (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH primary ciliary dyskinesia (ortholog); FOUND IN ciliary basal body (ortholog); microtubule (ortholog) NW_004955413 28234964 28250899 - 102014881 AGCD01014554;GBCB01061257;XM_005379432;XM_013511690 XP_005379489;XP_013367144 MODEL 8704601 protein-coding Bard1 BRCA1 associated RING domain 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to ionizing radiation (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-BARD1 complex (ortholog); cytoplasm (ortholog) NW_004955457 1187942 1258475 + 102020764 AGCD01046721;AGCD01046722;GBDF01159748;XM_005396916 XP_005396973 MODEL 8954285 pseudo LOC102006015 cysteine-rich PDZ-binding protein pseudogene NW_004955469 267316 267629 + 102006015 AGCD01052216;XR_263422 MODEL 8917357 protein-coding Ptgfrn prostaglandin F2 receptor inhibitor INVOLVED IN lipid droplet organization (ortholog); myoblast fusion involved in skeletal muscle regeneration (ortholog); ASSOCIATED WITH COVID-19 (ortholog) NW_004955435 20046712 20092051 + 102004001 AGCD01033445;GBDJ01272892;XM_005389111 XP_005389168 MODEL 39132436 rrna 5S_rRNA 5S ribosomal RNA 8709359 protein-coding LOC102015072 hematopoietic prostaglandin D synthase NW_004955405 4958128 4976383 - 102015072 AGCD01004669;AGCD01004670;GBDI01323199;XM_013519363 XP_013374817 MODEL 39131822 snrna U1 U1 spliceosomal RNA 8930759 protein-coding Gpc3 glypican 3 ENCODES a protein that exhibits peptidyl-dipeptidase inhibitor activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior axis specification (ortholog); body morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); atypical teratoid rhabdoid tumor (ortholog); Coronary Vessel Anomalies (ortholog); FOUND IN lysosome (ortholog); plasma membrane (ortholog) NW_004955473 969627 1431706 + 102022912 AGCD01053863;AGCD01053864;AGCD01053865;AGCD01053866;AGCD01053867;AGCD01053868;AGCD01053869;AGCD01053870;AGCD01053871;AGCD01053872;AGCD01053873;AGCD01053874;GBCE01095948;XM_013523049 XP_013378503 MODEL 9048916 protein-coding Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif 15 ENCODES a protein that exhibits endopeptidase activity (ortholog); extracellular matrix binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Distal Arthrogryposis Type 12 (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) NW_004955412 31336759 31360905 + 102023678 AGCD01013336;AGCD01013337;GBDI01296458;XM_005378569 XP_005378626 MODEL 10239054 ncrna LOC106147118 uncharacterized LOC106147118 NW_004955520 1007104 1008125 + 106147118 AGCD01068040;GBDF01237317;XR_001231872 MODEL 8992267 pseudo LOC102003541 60S acidic ribosomal protein P1 pseudogene NW_004955416 7907212 7907681 + 102003541 AGCD01017018;XM_005381274 MODEL 39134504 misc_rna 7SK 7SK RNA 8966202 protein-coding LOC102017325 uncharacterized LOC102017325 NW_004955413 6210739 6233554 - 102017325 AGCD01013713;AGCD01013714;AGCD01013715;AGCD01013716;AGCD01013717;GBDF01051656;XM_005379609 XP_005379666 MODEL 8746166 protein-coding Helz helicase with zinc finger ENCODES a protein that exhibits CCR4-NOT complex binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); ASSOCIATED WITH pervasive developmental disorder (ortholog); FOUND IN cytoplasm (ortholog) NW_004955478 6325632 6475144 - 102009050 AGCD01055892;AGCD01055893;AGCD01055894;GBDF01195418;XM_005402151;XM_005402152 XP_005402208;XP_005402209 MODEL 8840224 protein-coding Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 ENCODES a protein that exhibits protein-lysine-acetyltransferase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); cytosol (ortholog) NW_004955458 3352442 3356224 + 102020885 AGCD01047296;GBDF01048251;XM_005397258 XP_005397315 MODEL 8832729 protein-coding Tpp1 tripeptidyl peptidase 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); lysophosphatidic acid binding (ortholog); peptidase activity (ortholog); INVOLVED IN bone resorption (ortholog); epithelial cell differentiation (ortholog); lysosomal protein catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Angelman syndrome (ortholog); autosomal recessive spinocerebellar ataxia 7 (ortholog); FOUND IN Golgi apparatus (ortholog); lysosome (ortholog); membrane raft (ortholog) NW_004955414 22324847 22330912 - 102028524 AGCD01015453;GBCE01099114;XM_005380168;XM_005380169 XP_005380225;XP_005380226 MODEL 8946775 protein-coding Atp6v1e1 ATPase H+ transporting V1 subunit E1 ENCODES a protein that exhibits ATPase binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IIC (ortholog); cutis laxa (ortholog); RASopathy (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955454 5669883 5688623 - 102030382 AGCD01045180;AGCD01045181;GBDK01043238;XM_005395971 XP_005396028 MODEL 39131705 rrna 5S_rRNA 5S ribosomal RNA 8757439 protein-coding Iqub IQ motif and ubiquitin domain containing INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); mating (ortholog); FOUND IN 9+2 motile cilium (ortholog); acrosomal vesicle (ortholog); motile cilium (ortholog) NW_004955479 4988718 5059800 - 102012757 AGCD01056340;GBDF01085432;XM_005402325 XP_005402382 MODEL 8868094 protein-coding Sf3a1 splicing factor 3a subunit 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955455 4579153 4601942 - 102020308 AGCD01045681;GBBH01034806;XM_005396258 XP_005396315 MODEL 8963134 protein-coding Hnrnpd heterogeneous nuclear ribonucleoprotein D ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); minor groove of adenine-thymine-rich DNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955433 6452931 6470209 - 102004417 AGCD01031538;AGCD01031539;GBBH01085931;GBDF01046957;XM_005388237;XM_005388238 XP_005388294;XP_005388295 MODEL 8709536 ncrna LOC102022469 uncharacterized LOC102022469 NW_004955408 24472374 24475060 - 102022469 AGCD01008610;GBCE01106540;XR_001231905;XR_001231907 MODEL 8847491 ncrna LOC102018090 uncharacterized LOC102018090 NW_004955416 20999242 21004789 + 102018090 AGCD01017482;GBDI01164565;XR_260400 MODEL 10251940 ncrna LOC106150095 uncharacterized LOC106150095 NW_004955464 10693138 10729425 - 106150095 AGCD01050127;GBCE01094116;XR_001236701;XR_001236702 MODEL 8928345 protein-coding Ttll10 tubulin tyrosine ligase like 10 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, elongating (ortholog); INVOLVED IN protein polyglycylation (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) NW_004955486 9576174 9589297 - 102029519 AGCD01059191;AGCD01059192;GBBH01140468;GBDI01224711;XM_013504222 XP_013359676 MODEL 8950974 protein-coding Fam78a family with sequence similarity 78 member A NW_004955513 1060145 1073817 - 102021034 AGCD01066839;GBCB01025522;GBDK01362022;XM_005408360 XP_005408417 MODEL 8718061 protein-coding LOC102021471 secretoglobin family 1D member-like NW_004955511 6342089 6346015 + 102021471 AGCD01066602;GBCB01129881;XM_013506417 XP_013361871 MODEL 8717841 gene LOC102010841 Ig lambda-2 chain C regions-like NW_004955442 17155684 17169023 - 102010841 AGCD01037943;AGCD01037944;XM_005391686;XM_005391687 MODEL 39132437 rrna 5S_rRNA 5S ribosomal RNA 8787848 ncrna LOC102012458 uncharacterized LOC102012458 NW_004955429 17740928 17746251 - 102012458 AGCD01028865;GBDF01045489;XR_001234510 MODEL 8754720 pseudo LOC102003544 arfaptin-1 pseudogene NW_004955416 645573 646813 - 102003544 AGCD01016816 MODEL 9053767 pseudo LOC102024160 nuclear receptor-binding factor 2-like NW_004955435 9380995 9387375 - 102024160 AGCD01033048;AGCD01033049 MODEL 8770092 protein-coding Fkbp11 FKBP prolyl isomerase 11 ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog) NW_004955500 7744429 7747289 - 102028213 AGCD01063944;GBCB01007590;GBDF01084575;XM_013505646 XP_013361100 MODEL 9050663 protein-coding Trmt13 tRNA methyltransferase 13 NW_004955435 4885910 4902759 + 102022535 AGCD01032861;GBDF01002213;GBDJ01075836;XM_013516438 XP_013371892 MODEL 39133927 misc_rna 7SK 7SK RNA 8938370 ncrna LOC102019974 uncharacterized LOC102019974 NW_004955451 8257772 8275112 - 102019974 AGCD01043266;AGCD01043267;AGCD01043268;GBDF01225497;XR_001235956;XR_262589 MODEL 8788668 ncrna LOC102019687 uncharacterized LOC102019687 NW_004955470 7596316 7606300 + 102019687 AGCD01052800;GBDF01150010;XR_001237033 MODEL 8703585 protein-coding Aftph aftiphilin ENCODES a protein that exhibits clathrin binding (ortholog); FOUND IN AP-1 adaptor complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955424 19835911 19899878 - 102007915 AGCD01024837;AGCD01024838;GBCQ01008748;XM_005385699;XM_005385701 XP_005385756;XP_005385758 MODEL 8780852 protein-coding Chd1l chromodomain helicase DNA binding protein 1 like ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); histone reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH CAKUT (ortholog); Dwarfism (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955568 1132594 1189176 - 102015060 AGCD01074541;AGCD01074542;AGCD01074543;GBDF01157291;XM_005413466;XM_005413468 XP_005413523;XP_005413525 MODEL 8850381 protein-coding Alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase ENCODES a protein that exhibits dolichyl-phosphate beta-glucosyltransferase activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH polycystic kidney disease 7 (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) NW_004955431 9059074 9097597 + 102026779 AGCD01030155;AGCD01030156;GBCE01170368;XM_005387674;XM_013515813 XP_005387731;XP_013371267 MODEL 8942614 ncrna LOC102015076 uncharacterized LOC102015076 NW_004955454 16835868 16837506 + 102015076 AGCD01045529;GBDF01016923;XR_262801;XR_262802 MODEL 9051365 protein-coding Rftn2 raftlin family member 2 INVOLVED IN dsRNA transport (ortholog); response to exogenous dsRNA (ortholog) NW_004955403 2982753 3030594 + 102013674 AGCD01001744;AGCD01001745;GBDF01055374;XM_005373263;XR_001233175 XP_005373320 MODEL 39134191 misc_rna 7SK 7SK RNA 9015525 protein-coding Tigd2 tigger transposable element derived 2 NW_004955405 80872 84184 + 102004447 AGCD01004553;GBDI01262079;XM_013517268 XP_013372722 MODEL 10312303 ncrna LOC106147120 uncharacterized LOC106147120 NW_004955520 1165597 1168792 - 106147120 AGCD01068046;AGCD01068047;GBDI01376278;XR_001231873 MODEL 8707316 protein-coding Apom apolipoprotein M ENCODES a protein that exhibits antioxidant activity (ortholog); lipid transporter activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); high-density lipoprotein particle assembly (ortholog); high-density lipoprotein particle clearance (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Experimental Diabetes Mellitus (ortholog); Metabolic Syndrome (ortholog); FOUND IN discoidal high-density lipoprotein particle (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955437 190609 192781 + 102014943 AGCD01034108;GBDF01004738;XM_005389332;XM_005389333 XP_005389389;XP_005389390 MODEL 39133336 snrna U4 U4 spliceosomal RNA 8920249 protein-coding LOC102005257 zinc finger protein 14-like NW_004955417 31483286 31502861 - 102005257 AGCD01018652;AGCD01018653;GBBH01203101;XM_005381973 XP_005382030 MODEL 8741787 protein-coding Catsper1 cation channel sperm associated 1 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); flagellated sperm motility (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH glycogen storage disease V (ortholog); male infertility (ortholog); spermatogenic failure 7 (ortholog); FOUND IN CatSper complex (ortholog); plasma membrane (ortholog); sperm flagellum (ortholog) NW_004955422 19315640 19322868 + 102020926 AGCD01022999;GBDF01119307;XM_005384434;XM_013514142;XM_013514143 XP_005384491;XP_013369596;XP_013369597 MODEL 8993297 protein-coding LOC102007058 keratin, type II cuticular Hb5 NW_004955547 2711781 2718828 - 102007058 AGCD01072294;GBCB01095717;XM_005411935 XP_005411992 MODEL 8770172 protein-coding Wdr46 WD repeat domain 46 INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955437 1840875 1848258 - 102030345 AGCD01034239;GBDF01087150;XM_013516886 XP_013372340 MODEL 8875429 protein-coding Helz2 helicase with zinc finger 2 ENCODES a protein that exhibits exoribonuclease II activity (ortholog); RNA helicase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955528 652381 666923 + 102008566 AGCD01069541;GBDI01062644;XM_005409957;XM_013507493 XP_005410014;XP_013362947 MODEL 8865132 protein-coding Tpp2 tripeptidyl peptidase 2 ENCODES a protein that exhibits aminopeptidase activity (ortholog); identical protein binding (ortholog); peptide binding (ortholog); INVOLVED IN intracellular amino acid homeostasis (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); Evans Syndrome, Immunodeficiency, and Premature Immunosenescence associated with Tripeptidyl-Peptidase II Deficiency (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog) NW_004955404 8465877 8528372 - 102018461 AGCD01003353;GBDF01050175;GBDF01050177;XM_013515923 XP_013371377 MODEL 8891276 protein-coding Gemin5 gem nuclear organelle associated protein 5 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN regulation of translation (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH essential tremor (ortholog); genetic disease (ortholog); neurodevelopmental disorder with cerebellar atrophy and motor dysfunction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955408 9136490 9179087 - 102008600 AGCD01008235;AGCD01008236;GBDF01122245;XM_005376211;XM_005376212;XM_013508713 XP_005376268;XP_005376269;XP_013364167 MODEL 8972701 protein-coding Barhl1 BarH like homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN midbrain development (ortholog); negative regulation of neuron apoptotic process (ortholog); neuron migration (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Hearing Loss (ortholog); high grade glioma (ortholog); FOUND IN nucleus (ortholog) NW_004955513 1955906 1970110 + 102022526 AGCD01066866;AGCD01066867;GBBH01063530;GBDJ01269024;XM_013506597 XP_013362051 MODEL 8927828 protein-coding Ptgir prostaglandin I2 receptor INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of platelet-derived growth factor receptor signaling pathway (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin I2 signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); heart disease (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955574 686156 690126 - 102028353 AGCD01075122;GBDK01305224;XM_005413837;XM_005413838;XM_013509573 XP_005413894;XP_005413895;XP_013365027 MODEL 8736405 protein-coding LOC102006019 olfactory receptor 51I2-like NW_004955414 21379795 21380742 - 102006019 AGCD01015417;XM_005380088 XP_005380145 MODEL 8900944 protein-coding Plekhb2 pleckstrin homology domain containing B2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog) NW_004955459 594794 661152 + 102016896 AGCD01047942;AGCD01047943;AGCD01047944;AGCD01047945;AGCD01047946;AGCD01047947;GBCQ01001045;GBDJ01009535;XM_013521055 XP_013376509 MODEL 8726005 protein-coding Asnsd1 asparagine synthetase domain containing 1 INVOLVED IN adipose tissue development (ortholog); muscle organ development (ortholog); skeletal muscle organ development (ortholog); ASSOCIATED WITH myopathy (ortholog) NW_004955403 9176425 9184310 - 102007394 AGCD01001901;GBDF01123988;GBDI01173372;XM_005373320;XM_013512372 XP_005373377;XP_013367826 MODEL 8708318 protein-coding Hnrnpdl heterogeneous nuclear ribonucleoprotein D like ENCODES a protein that exhibits double-stranded DNA binding (ortholog); poly(A) binding (ortholog); poly(G) binding (ortholog); INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH autosomal dominant limb-girdle muscular dystrophy type 3 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955433 6515509 6522081 - 102006156 AGCD01031539;GBBH01000726;XM_005388241 XP_005388298 MODEL 39132363 snrna U6 U6 spliceosomal RNA 8787750 protein-coding Trmt1l tRNA methyltransferase 1L ENCODES a protein that exhibits tRNA (guanine(27)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN adult behavior (ortholog); adult locomotory behavior (ortholog); tRNA N2-guanine methylation (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955406 23735715 23772010 - 102008816 AGCD01006182;AGCD01006183;AGCD01006184;GBDF01007025;XM_005375072;XM_005375073;XM_013521695;XM_013521698 XP_005375129;XP_005375130;XP_013377149;XP_013377152 MODEL 8750004 protein-coding E4f1 E4F transcription factor 1 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Neoplastic Cell Transformation (ortholog); pyruvate decarboxylase deficiency (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spindle (ortholog) NW_004955442 15031210 15041437 - 102026046 AGCD01037854;GBCQ01125643;XM_005391435;XM_005391436;XM_005391437;XM_005391438;XM_013517726;XM_013517727;XM_013517728 XP_005391492;XP_005391493;XP_005391494;XP_005391495;XP_013373180;XP_013373181;XP_013373182 MODEL 9012162 protein-coding Ttll11 tubulin tyrosine ligase like 11 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN microtubule severing (ortholog); protein polyglutamylation (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955419 5968400 6205342 + 102025466 AGCD01019848;AGCD01019849;AGCD01019850;AGCD01019851;AGCD01019852;GBDF01194811;GBDK01203861;XM_013513286 XP_013368740 MODEL 8922039 protein-coding Gpc4 glypican 4 INVOLVED IN regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of presynapse assembly (ortholog); synaptic membrane adhesion (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); genetic disease (ortholog); FOUND IN external side of plasma membrane (ortholog); glutamatergic synapse (ortholog); presynaptic membrane (ortholog) NW_004955473 1546615 1655822 + 102025680 AGCD01053878;AGCD01053879;AGCD01053880;GBCE01053611;XM_005401204 XP_005401261 MODEL 8960755 protein-coding LOC102017327 elongator complex protein 1-like NW_004955414 17739374 17749693 - 102017327 AGCD01015249;AGCD01015250;GBDF01066305;XM_005380453 XP_005380510 MODEL 39134505 misc_rna 7SK 7SK RNA 8832890 protein-coding Alg6 ALG6 alpha-1,3-glucosyltransferase ENCODES a protein that exhibits dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ic (ortholog); cystic kidney disease (ortholog) NW_004955423 26569824 26592857 - 102007569 AGCD01024097;AGCD01024098;GBBH01000138;GBDI01176676;XM_013514390 XP_013369844 MODEL 9049636 protein-coding Kif2c kinesin family member 2C ENCODES a protein that exhibits microtubule plus-end binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment or maintenance of microtubule cytoskeleton polarity (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); contact dermatitis (ortholog); COVID-19 (ortholog); FOUND IN chromosome, centromeric region (ortholog); glutamatergic synapse (ortholog); kinetochore (ortholog) NW_004955464 13453637 13475447 - 102011966 AGCD01050281;AGCD01050282;AGCD01050283;GBDF01008525;XM_005398743;XM_005398744;XM_005398746;XM_013521631;XM_013521632 XP_005398800;XP_005398801;XP_005398803;XP_013377085;XP_013377086 MODEL 39131706 rrna 5S_rRNA 5S ribosomal RNA 10156522 ncrna LOC106147122 uncharacterized LOC106147122 NW_004955520 2327237 2338394 - 106147122 AGCD01068078;GBCB01080155;XR_001231875;XR_001231876 MODEL 8793469 protein-coding Bloc1s2 biogenesis of lysosomal organelles complex 1 subunit 2 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); transcription factor binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Sciatica (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); centrosome (ortholog) NW_004955507 6138511 6144823 - 102021692 AGCD01065697;GBDI01131466;XM_005407689;XM_005407690;XR_264384 XP_005407746;XP_005407747 MODEL 8990901 protein-coding Atp6v1e2 ATPase H+ transporting V1 subunit E2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955441 13432951 13458467 - 102013651 AGCD01037149;AGCD01037150;AGCD01037151;GBDF01047982;XM_005390982;XM_005390983;XM_013517587 XP_005391039;XP_005391040;XP_013373041 MODEL 8806369 ncrna LOC102003546 uncharacterized LOC102003546 NW_004955417 24120365 24129898 + 102003546 AGCD01018453;GBDJ01104441;XR_260489 MODEL 8978744 protein-coding Sf3a2 splicing factor 3a subunit 2 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955495 5896648 5904287 - 102016929 AGCD01062043;GBDF01008843;XM_005405914;XM_005405915 XP_005405971;XP_005405972 MODEL 8744817 pseudo LOC102010056 protein FAM136A-like NW_004955416 11217210 11218822 - 102010056 AGCD01017181 MODEL 8814534 ncrna LOC102018091 uncharacterized LOC102018091 NW_004955416 30012956 30018288 + 102018091 AGCD01017675;GBDF01066665;XR_260438 MODEL 10325958 ncrna LOC106150096 uncharacterized LOC106150096 NW_004955464 10783404 10795883 - 106150096 AGCD01050127;GBBH01095879;XR_001236705 MODEL 8907865 protein-coding Wdr47 WD repeat domain 47 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior commissure morphogenesis (ortholog); autophagy (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955435 12414964 12479883 - 102022322 AGCD01033147;AGCD01033148;GBDI01324335;XM_005388841;XM_013516532;XM_013516533;XM_013516534;XM_013516535;XM_013516536 XP_005388898;XP_013371986;XP_013371987;XP_013371988;XP_013371989;XP_013371990 MODEL 8703767 protein-coding LOC102010843 kallikrein-2-like NW_004955559 416199 433647 - 102010843 AGCD01073584;AGCD01073585;AGCD01073586;GBDJ01062263;GBDJ01062266;XM_005412758 XP_005412815 MODEL 39132445 rrna 5S_rRNA 5S ribosomal RNA 8934201 protein-coding LOC102015081 17-beta-hydroxysteroid dehydrogenase type 6-like NW_004955458 4337021 4399484 + 102015081 AGCD01047406;AGCD01047407;AGCD01047408;AGCD01047409;AGCD01047410;AGCD01047411;GBDF01118072;XM_013521022 XP_013376476 MODEL 8788712 protein-coding Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); male gamete generation (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); cryptorchidism (ortholog); hypertension (ortholog) NW_004955504 3167142 3320632 + 102022834 AGCD01064864;AGCD01064865;AGCD01064866;AGCD01064867;GBCQ01126940;XM_013505868 XP_013361322 MODEL 8897402 protein-coding Chd2 chromodomain helicase DNA binding protein 2 ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); hematopoietic stem cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN nucleus (ortholog) NW_004955416 21085570 21210321 + 102019061 AGCD01017496;AGCD01017497;AGCD01017498;GBDI01182725;XM_005381599 XP_005381656 MODEL 8856478 protein-coding Aspa aspartoacylase ENCODES a protein that exhibits aspartoacylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetate metabolic process (ortholog); aspartate metabolic process (ortholog); central nervous system myelination (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Canavan disease (ortholog); Experimental Diabetes Mellitus (ortholog); Tremor (ortholog); FOUND IN cytosol (ortholog) NW_004955467 13277014 13332658 - 102023889 AGCD01051670;AGCD01051671;GBCQ01041040;XM_005399729;XM_013522251;XM_013522252;XM_013522253;XM_013522254;XM_013522255 XP_005399786;XP_013377705;XP_013377706;XP_013377707;XP_013377708;XP_013377709 MODEL 8761807 protein-coding Trub1 TruB pseudouridine synthase family member 1 ENCODES a protein that exhibits pre-miRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA pseudouridine(55) synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of pre-miRNA processing (ortholog); tRNA modification (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955431 19840827 19877930 + 102020477 AGCD01030455;AGCD01030456;GBDF01225347;XM_005387841 XP_005387898 MODEL 8970244 protein-coding LOC102012465 transmembrane emp24 domain-containing protein 11 NW_004955514 560181 584300 - 102012465 AGCD01067014;GBDJ01333431;XM_005408689 XP_005408746 MODEL 8712812 ncrna LOC102017330 uncharacterized LOC102017330 NW_004955475 519946 550542 + 102017330 AGCD01054697;AGCD01054698;AGCD01054699;AGCD01054700;GBDK01432758;XR_001230750;XR_001230751;XR_001230752 MODEL 39133337 snrna U4 U4 spliceosomal RNA 39131829 snrna U1 U1 spliceosomal RNA 39133928 misc_rna 7SK 7SK RNA 8731158 protein-coding LOC102022471 olfactory receptor 6C2 NW_004955458 2877948 2878895 + 102022471 AGCD01047255;XM_005397503 XP_005397560 MODEL 9022696 ncrna LOC102005258 uncharacterized LOC102005258 NW_004955481 9167420 9182478 - 102005258 AGCD01057096;GBDF01041181;XR_263795 MODEL 39131718 rrna 5S_rRNA 5S ribosomal RNA 8875263 protein-coding Catsper2 cation channel sperm associated 2 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); fertilization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Deafness-Infertility Syndrome (ortholog); infertility (ortholog); male infertility (ortholog); FOUND IN CatSper complex (ortholog); sperm flagellum (ortholog); sperm principal piece (ortholog) NW_004955409 3925106 3940566 - 102030503 AGCD01009267;AGCD01009268;GBDF01053312;XM_005376669;XM_013509966;XM_013509978 XP_005376726;XP_013365420;XP_013365432 MODEL 8786878 protein-coding Tppp2 tubulin polymerization promoting protein family member 2 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); regulation of flagellated sperm motility (ortholog); FOUND IN cytosol (ortholog); sperm flagellum (ortholog) NW_004955550 1779405 1785385 + 102005083 AGCD01072588;GBCE01168156;GBDI01105945;XM_013508575 XP_013364029 MODEL 9009912 pseudo LOC102019975 leptin receptor overlapping transcript-like 1 pseudogene NW_004955451 15295677 15297374 - 102019975 AGCD01043604 MODEL 8741297 protein-coding Fam78b family with sequence similarity 78 member B NW_004955462 10596799 10693428 + 102029722 AGCD01049369;GBCB01100521;XM_005398240;XM_005398241 XP_005398297;XP_005398298 MODEL 8785185 protein-coding Pdk4 pyruvate dehydrogenase kinase 4 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); pyruvate dehydrogenase (acetyl-transferring) kinase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to starvation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955432 12169548 12182064 - 102018631 AGCD01030969;GBDJ01083740;XM_005388066 XP_005388123 MODEL 9065947 protein-coding Aga aspartylglucosaminidase ENCODES a protein that exhibits identical protein binding (ortholog); N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity (ortholog); INVOLVED IN protein deglycosylation (ortholog); ASSOCIATED WITH aspartylglucosaminuria (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); lysosome (ortholog) NW_004955403 30471809 30482653 + 102014731 AGCD01002398;GBDF01156718;XM_005373511 XP_005373568 MODEL 8938040 ncrna LOC102006020 uncharacterized LOC102006020 NW_004955414 22872844 22875573 - 102006020 AGCD01015483;GBCQ01017796;XR_260188 MODEL 39132365 snrna U6 U6 spliceosomal RNA 8897538 ncrna LOC102024162 uncharacterized LOC102024162 NW_004955437 1572617 1575264 - 102024162 AGCD01034218;GBDF01220897;XR_261824 MODEL 8955311 protein-coding Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); disulfide oxidoreductase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); protein folding in endoplasmic reticulum (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955403 14681015 14717060 - 102016545 AGCD01002029;GBCQ01063275;XM_005373345 XP_005373402 MODEL 8783671 protein-coding Apoo apolipoprotein O INVOLVED IN cristae formation (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH lactic acidosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); extracellular region (ortholog); Golgi membrane (ortholog) NW_004955509 4256834 4325086 - 102015873 AGCD01066061;AGCD01066062;AGCD01066063;AGCD01066064;GBDF01222597;XM_005407836;XM_005407837;XM_013506305 XP_005407893;XP_005407894;XP_013361759 MODEL 8982980 protein-coding Tigd3 tigger transposable element derived 3 NW_004955422 19880777 19883567 - 102010815 AGCD01023044;GBDF01055732;XM_005384499 XP_005384556 MODEL 9059602 protein-coding Rfwd3 ring finger and WD repeat domain 3 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); p53 binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); Fanconi anemia complementation group W (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 2824057 2857321 + 102025010 AGCD01058136;AGCD01058137;AGCD01058138;AGCD01058139;AGCD01058140;AGCD01058141;AGCD01058142;GBDJ01316140;XM_005403457;XM_005403458;XM_005403460;XM_005403461;XM_005403462;XM_013503864 XP_005403514;XP_005403515;XP_005403517;XP_005403518;XP_005403519;XP_013359318 MODEL 39134506 misc_rna 7SK 7SK RNA 8940088 protein-coding Irag1 inositol 1,4,5-triphosphate receptor associated 1 INVOLVED IN negative regulation of smooth muscle contraction (ortholog); phosphatidylinositol-mediated signaling (ortholog); relaxation of vascular associated smooth muscle (ortholog) NW_004955414 26185226 26297647 - 102008212 AGCD01015640;GBBH01203093;XM_013511906;XM_013511907;XM_013511908;XM_013511909;XM_013511910 XP_013367360;XP_013367361;XP_013367362;XP_013367363;XP_013367364 MODEL 8785102 pseudo LOC102012468 ribose-phosphate pyrophosphokinase 1-like NW_004955519 2455691 2458425 + 102012468 AGCD01067931;AGCD01067932 MODEL 8848885 ncrna LOC102007060 uncharacterized LOC102007060 NW_004955554 703446 714957 + 102007060 AGCD01072953;GBDF01082739;XR_001232295;XR_264946 MODEL 9023565 protein-coding Gemin6 gem nuclear organelle associated protein 6 INVOLVED IN spliceosomal snRNP assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) NW_004955441 6456482 6461027 + 102012367 AGCD01036922;GBCQ01122381;XM_005390892;XM_005390893;XM_005390894;XM_005390895;XM_005390896 XP_005390949;XP_005390950;XP_005390951;XP_005390952;XP_005390953 MODEL 8830410 protein-coding Kif3a kinesin family member 3A ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN alpha-tubulin acetylation (ortholog); anterior/posterior pattern specification (ortholog); anterograde dendritic transport (ortholog); PARTICIPATES IN Hedgehog signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); bone development disease (ortholog); FOUND IN axon cytoplasm (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955408 4072823 4115975 - 102030602 AGCD01008086;AGCD01008087;AGCD01008088;GBDF01053282;XM_005376105;XM_005376106;XM_005376107 XP_005376162;XP_005376163;XP_005376164 MODEL 8800829 protein-coding Hemgn hemogen INVOLVED IN regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH nephronophthisis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955419 27524008 27548375 + 102020342 AGCD01020441;GBDI01161766;XM_005382835;XM_005382836 XP_005382892;XP_005382893 MODEL 8838861 protein-coding Ptgis prostaglandin I2 synthase ENCODES a protein that exhibits heme binding (ortholog); prostaglandin-I synthase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); atherosclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955445 8624228 8663385 + 102005315 AGCD01039608;AGCD01039609;GBCE01000913;XM_005392329 XP_005392386 MODEL 8864278 protein-coding LOC102021473 lipocalin NW_004955513 4813800 4818133 - 102021473 AGCD01066940;GBBH01225941;XM_005408547 XP_005408604 MODEL 8914210 protein-coding Plekhd1 pleckstrin homology and coiled-coil domain containing D1 ASSOCIATED WITH Breast Neoplasms (ortholog) NW_004955466 853902 878813 - 102015091 AGCD01050680;GBCB01056747;GBCE01126830;XM_013521969 XP_013377423 MODEL 8786271 protein-coding Eaf1 ELL associated factor 1 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN nuclear body (ortholog); transcription elongation factor complex (ortholog) NW_004955430 1933290 1946900 + 102011466 AGCD01029143;GBDF01053689;XM_005387303 XP_005387360 MODEL 8785010 protein-coding Hnrnpf heterogeneous nuclear ribonucleoprotein F ENCODES a protein that exhibits single-stranded RNA binding (ortholog); TBP-class protein binding (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH renal glycosuria (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); synapse (ortholog) NW_004955546 1386186 1401071 - 102008264 AGCD01072054;AGCD01072055;AGCD01072056;GBDF01008558;XM_005411770 XP_005411827 MODEL 8890738 protein-coding Ttll12 tubulin tyrosine ligase like 12 ENCODES a protein that exhibits histone H4K20 trimethyltransferase activity (ortholog); histone H4K20me2 reader activity (ortholog); tubulin-tyrosine ligase activity (ortholog); INVOLVED IN negative regulation of type I interferon-mediated signaling pathway (ortholog); regulation of mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955413 28316936 28333423 - 102017001 AGCD01014556;GBDJ01276308;XM_005379439;XM_013511666 XP_005379496;XP_013367120 MODEL 8742549 protein-coding Wdr48 WD repeat domain 48 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); embryonic organ development (ortholog); ASSOCIATED WITH cognitive disorder (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955427 24873616 24917691 - 102026998 AGCD01027525;GBDF01050505;XM_005386566;XM_005386567;XM_013515075 XP_005386623;XP_005386624;XP_013370529 MODEL 8874200 protein-coding Gpc5 glypican 5 PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); nephrotic syndrome (ortholog) NW_004955404 16824366 18091464 - 102030266 AGCD01003574;AGCD01003575;AGCD01003576;AGCD01003577;AGCD01003578;AGCD01003579;AGCD01003580;AGCD01003581;AGCD01003582;AGCD01003583;AGCD01003584;AGCD01003585;AGCD01003586;AGCD01003587;AGCD01003588;AGCD01003589;AGCD01003590;AGCD01003591;AGCD01003592;AGCD01003593;AGCD01003594;AGCD01003595;AGCD01003596;AGCD01003597;AGCD01003598;AGCD01003599;AGCD01003600;AGCD01003601;AGCD01003602;AGCD01003603;AGCD01003604;AGCD01003605;AGCD01003606;AGCD01003607;GBDF01158698;XM_005374117;XM_005374118;XM_013516298 XP_005374174;XP_005374175;XP_013371752 MODEL 9022945 protein-coding Fkbp14 FKBP prolyl isomerase 14 ASSOCIATED WITH congenital muscular dystrophy (ortholog); Ehlers-Danlos syndrome kyphoscoliotic type 2 (ortholog) NW_004955410 31313637 31325544 - 102018479 AGCD01011321;GBCE01159547;XM_005377493 XP_005377550 MODEL 8708307 protein-coding Barhl2 BarH like homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell fate commitment (ortholog); cell fate determination (ortholog); nervous system development (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Lymphatic Metastasis (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955423 3516973 3522459 + 102005484 AGCD01023515;GBDF01014640;GBDF01014641;XM_013514374 XP_013369828 MODEL 39133338 snrna U4 U4 spliceosomal RNA 9012088 protein-coding Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 ENCODES a protein that exhibits protein transmembrane transporter activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); blood coagulation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 8 (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955555 2183752 2186154 + 102022235 AGCD01073131;AGCD01073132;GBBH01208027;GBDK01228953;XM_013508764 XP_013364218 MODEL 39134507 misc_rna 7SK 7SK RNA 39133929 misc_rna 7SK 7SK RNA 9037534 protein-coding LOC102010058 galectin-5-like NW_004955481 5603002 5609837 - 102010058 AGCD01056998;GBDI01345788;XM_005402926 XP_005402983 MODEL 39134192 misc_rna 7SK 7SK RNA 8924114 protein-coding LOC102018096 serine/threonine-protein phosphatase 6 regulatory subunit 1 NW_004955483 7973276 8000527 + 102018096 AGCD01057823;GBDI01008367;GBDI01008376;XM_005403389;XM_005403390;XM_013503822;XM_013503823 XP_005403446;XP_005403447;XP_013359276;XP_013359277 MODEL 10347570 pseudo LOC106150097 diphosphoinositol polyphosphate phosphohydrolase 2 pseudogene NW_004955464 181925 184495 + 106150097 AGCD01049928 MODEL 8915414 ncrna LOC102010844 uncharacterized LOC102010844 NW_004955443 5803759 5817261 + 102010844 AGCD01038244;GBBH01211346;XR_262178 MODEL 8842683 protein-coding Trmt2a tRNA methyltransferase 2A ENCODES a protein that exhibits C-methyltransferase activity (ortholog); tRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent (ortholog) NW_004955442 17993130 17997944 + 102023302 AGCD01037991;GBDF01088981;XM_005391731;XM_005391733 XP_005391788;XP_005391790 MODEL 8828162 protein-coding Fam81a family with sequence similarity 81 member A ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955450 15282831 15324630 - 102013234 AGCD01042787;GBCQ01064619;XM_005393833;XM_013519023 XP_005393890;XP_013374477 MODEL 8822385 protein-coding Alg8 ALG8 alpha-1,3-glucosyltransferase ENCODES a protein that exhibits dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); obsolete protein N-linked glycosylation via asparagine (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ih (ortholog); cystic kidney disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955414 13832808 13863076 + 102005585 AGCD01015121;AGCD01015122;AGCD01015123;GBDK01241792;XM_005379820;XM_005379821 XP_005379877;XP_005379878 MODEL 9027180 protein-coding Hemk1 HemK methyltransferase 1, mitochondrial release factors N(5)-glutamine ENCODES a protein that exhibits peptide chain release factor N(5)-glutamine methyltransferase activity (ortholog); FOUND IN mitochondrion (ortholog) NW_004955532 2348123 2359423 + 102010196 AGCD01070224;GBCB01098063;XM_005410286;XM_005410287;XM_005410288;XM_005410289;XM_005410290;XM_005410291;XM_005410292;XM_005410293;XM_005410294;XM_005410295;XM_005410297;XM_005410298;XM_005410299;XM_005410300;XM_005410301;XM_013507651 XP_005410343;XP_005410344;XP_005410345;XP_005410346;XP_005410347;XP_005410348;XP_005410349;XP_005410350;XP_005410351;XP_005410352;XP_005410354;XP_005410355;XP_005410356;XP_005410357;XP_005410358;XP_013363105 MODEL 39132448 rrna 5S_rRNA 5S ribosomal RNA 8794768 protein-coding LOC102015082 olfactory receptor 2AP1-like NW_004955458 2261557 2262498 - 102015082 AGCD01047222;XM_005397493 XP_005397550 MODEL 8826691 protein-coding Aspdh aspartate dehydrogenase domain containing NW_004955559 652639 655084 + 102017070 AGCD01073606;GBDF01223691;XM_005412778;XM_013509060 XP_005412835;XP_013364514 MODEL 10286406 ncrna LOC106147123 uncharacterized LOC106147123 NW_004955520 2813505 2836089 - 106147123 AGCD01068083;XR_001231881;XR_001231882 MODEL 8737393 pseudo LOC102017333 lymphokine-activated killer T-cell-originated protein kinase pseudogene NW_004955475 5548381 5554749 - 102017333 AGCD01054920;AGCD01054921 MODEL 8966875 protein-coding LOC102019690 zinc finger protein 239-like NW_004955472 7099528 7311751 - 102019690 AGCD01053616;AGCD01053617;AGCD01053618;AGCD01053619;GBCQ01110878;XM_005401140;XM_005401141;XM_005401142;XM_005401143;XM_013522998;XM_013522999;XM_013523000;XM_013523001;XM_013523002;XM_013523003;XM_013523004;XM_013523005;XM_013523006;XM_013523007;XM_013523008;XM_013523009;XM_013523010;XM_013523011;XR_001237089;XR_001237090;XR_001237091;XR_001237092;XR_001237093;XR_001237094;XR_001237095 XP_005401197;XP_005401198;XP_005401199;XP_005401200;XP_013378452;XP_013378453;XP_013378454;XP_013378455;XP_013378456;XP_013378457;XP_013378458;XP_013378459;XP_013378460;XP_013378461;XP_013378462;XP_013378463;XP_013378464;XP_013378465 MODEL 8833558 protein-coding Atp6v1f ATPase H+ transporting V1 subunit F ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) NW_004955479 9664574 9667667 + 102005708 AGCD01056485;AGCD01056486;GBCB01001485;XM_005402399 XP_005402456 MODEL 39131837 snrna U1 U1 spliceosomal RNA 8857177 protein-coding Apool apolipoprotein O like PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN MICOS complex (ortholog); mitochondrion (ortholog) NW_004955529 3849326 3929588 + 102022117 AGCD01069803;AGCD01069804;AGCD01069805;AGCD01069806;GBBH01149693;XM_005410081 XP_005410138 MODEL 8743973 protein-coding LOC102003547 C-C motif chemokine 2 NW_004955481 8954125 8956004 + 102003547 AGCD01057090;GBCE01054732;XM_005402837 XP_005402894 MODEL 8866538 protein-coding Sf3a3 splicing factor 3a subunit 3 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 15691729 15715782 - 102016339 AGCD01044494;AGCD01044495;GBCB01056221;XM_005395224 XP_005395281 MODEL 8961065 protein-coding LOC102005261 olfactory receptor 1L6 NW_004955419 5210223 5211170 - 102005261 AGCD01019789;XM_005382522 XP_005382579 MODEL 39134508 misc_rna 7SK 7SK RNA 8719500 ncrna LOC102019978 uncharacterized LOC102019978 NW_004955454 2669191 2673784 - 102019978 AGCD01045028;GBDF01208782;XR_001236254;XR_262770 MODEL 8826508 protein-coding Pdlim1 PDZ and LIM domain 1 ENCODES a protein that exhibits actin binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); establishment or maintenance of actin cytoskeleton polarity (ortholog); fibroblast migration (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955507 1499223 1525924 - 102007254 AGCD01065563;GBCB01057305;XM_005407537 XP_005407594 MODEL 39132366 snrna U6 U6 spliceosomal RNA 8849822 protein-coding Kif3b kinesin family member 3B ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cilium assembly (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); oligospermia (ortholog); optic atrophy (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955422 28738567 28779584 - 102009622 AGCD01023368;GBDJ01272072;XM_005384873;XM_005384874;XM_013514112 XP_005384930;XP_005384931;XP_013369566 MODEL 8905218 protein-coding Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif 17 ASSOCIATED WITH anterior segment dysgenesis (ortholog); genetic disease (ortholog); Liver Neoplasms (ortholog) NW_004955416 27128066 27434826 - 102019062 AGCD01017610;AGCD01017611;AGCD01017612;AGCD01017613;AGCD01017614;AGCD01017615;GBCE01108669;GBDJ01093005;XM_013512522;XM_013512523 XP_013367976;XP_013367977 MODEL 8768717 protein-coding Trub2 TruB pseudouridine synthase family member 2 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); tRNA pseudouridine(55) synthase activity (ortholog); INVOLVED IN mitochondrial tRNA pseudouridine synthesis (ortholog); mRNA pseudouridine synthesis (ortholog); positive regulation of mitochondrial translation (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); ribonucleoprotein granule (ortholog) NW_004955570 826776 837116 - 102024393 AGCD01074769;GBDI01220800;XM_005413537 XP_005413594 MODEL 8881689 protein-coding Chd3 chromodomain helicase DNA binding protein 3 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN centrosome cycle (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955467 9024112 9050062 - 102029728 AGCD01051481;GBBH01116472;GBCQ01096262;XM_013522050;XM_013522051;XM_013522052;XM_013522053;XM_013522054;XM_013522055;XM_013522056;XM_013522057;XM_013522058;XM_013522059 XP_013377504;XP_013377505;XP_013377506;XP_013377507;XP_013377508;XP_013377509;XP_013377510;XP_013377511;XP_013377512;XP_013377513 MODEL 8980401 protein-coding Dnajc11 DnaJ heat shock protein family (Hsp40) member C11 INVOLVED IN cristae formation (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955486 5959083 6011177 + 102024239 AGCD01059096;AGCD01059097;AGCD01059098;AGCD01059099;AGCD01059100;GBDF01121226;XM_013504143 XP_013359597 MODEL 8762067 protein-coding Trmt44 tRNA methyltransferase 44 homolog NW_004955514 2618671 2636822 - 102008970 AGCD01067085;GBBH01206510;XM_005408776 XP_005408833 MODEL 9042516 pseudo LOC102012474 39S ribosomal protein L18, mitochondrial pseudogene NW_004955540 2266992 2270829 - 102012474 AGCD01071316 MODEL 8863634 protein-coding Gpc6 glypican 6 INVOLVED IN cell migration (ortholog); regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Congenital Limb Deformities (ortholog); Congenital Micromelic Dysplasia with Dislocation of Radius (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) NW_004955404 15429811 16504973 - 102029256 AGCD01003543;AGCD01003544;AGCD01003545;AGCD01003546;AGCD01003547;AGCD01003548;AGCD01003549;AGCD01003550;AGCD01003551;AGCD01003552;AGCD01003553;AGCD01003554;AGCD01003555;AGCD01003556;AGCD01003557;AGCD01003558;AGCD01003559;AGCD01003560;AGCD01003561;GBCE01054960;XM_005374116 XP_005374173 MODEL 8950412 protein-coding Fkbp15 FKBP prolyl isomerase family member 15 ASSOCIATED WITH amphetamine abuse (ortholog); genetic disease (ortholog); substance-related disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); endosome (ortholog) NW_004955419 14264488 14329890 + 102026641 AGCD01020015;AGCD01020016;GBDF01191885;XM_005382688;XM_005382689 XP_005382745;XP_005382746 MODEL 8968739 protein-coding Catsper3 cation channel sperm associated 3 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sodium ion transport (ortholog); sperm capacitation (ortholog); FOUND IN acrosomal vesicle (ortholog); CatSper complex (ortholog); endoplasmic reticulum (ortholog) NW_004955408 30150736 30179834 + 102007859 AGCD01008799;AGCD01008800;GBDF01224920;XM_005376470;XM_013507175;XM_013507180;XM_013507183 XP_005376527;XP_013362629;XP_013362634;XP_013362637 MODEL 8913259 protein-coding Tppp3 tubulin polymerization promoting protein family member 3 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN decidualization (ortholog); embryo implantation (ortholog); microtubule bundle formation (ortholog); FOUND IN microtubule bundle (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955484 9246734 9250293 + 102005264 AGCD01058413;GBDK01012917;XM_005403658 XP_005403715 MODEL 8762369 ncrna LOC102021474 uncharacterized LOC102021474 NW_004955433 10006841 10023375 + 102021474 AGCD01031621;GBDF01126170;XR_001234700;XR_261577;XR_261578 MODEL 9031716 pseudo LOC102006021 calcyclin-binding protein pseudogene NW_004955470 12066013 12067427 + 102006021 AGCD01052919 MODEL 9049585 protein-coding Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog) NW_004955514 3698644 3699227 - 102008971 AGCD01067105;GBCE01116712;GBDF01001526;XM_013506813 XP_013362267 MODEL 8752126 protein-coding Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to glycine (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); Memory Disorders (ortholog); obesity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955458 5436544 5448201 - 102002999 AGCD01047492;AGCD01047493;GBBH01126322;GBDJ01164672;XM_013520942 XP_013376396 MODEL 8893754 protein-coding Barx1 BARX homeobox 1 INVOLVED IN animal organ development (ortholog); anterior/posterior pattern specification (ortholog); cell-cell signaling (ortholog); ASSOCIATED WITH esophagus adenocarcinoma (ortholog) NW_004955515 4230713 4234189 + 102009310 AGCD01067318;GBBH01116403;GBCE01029812;XM_005408924 XP_005408981 MODEL 39134193 misc_rna 7SK 7SK RNA 8849394 pseudo LOC102024163 60S ribosomal protein L30-like NW_004955534 1136896 1137291 + 102024163 AGCD01070487 MODEL 8939025 ncrna LOC102019981 uncharacterized LOC102019981 NW_004955406 40112681 40116587 + 102019981 AGCD01006654;GBDK01373912;XR_259529 MODEL 8935663 protein-coding Eaf2 ELL associated factor 2 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of epithelial cell proliferation involved in prostate gland development (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); transcription elongation factor complex (ortholog) NW_004955427 21171900 21204138 + 102006690 AGCD01027432;AGCD01027433;AGCD01027434;GBCE01143382;XM_005386499 XP_005386556 MODEL 39131534 protein-coding IRAG2 inositol 1,4,5-triphosphate receptor associated 2 8856862 protein-coding LOC102010846 olfactory receptor 2W1-like NW_004955576 1239098 1240057 - 102010846 AGCD01075364;XM_005413951 XP_005414008 MODEL 8981151 pseudo LOC102022476 protein sprouty homolog 4-like NW_004955460 12524558 12531163 - 102022476 AGCD01048659 MODEL 8783003 protein-coding Alg9 ALG9 alpha-1,2-mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Il (ortholog) NW_004955412 13510714 13599216 - 102019374 AGCD01012840;AGCD01012841;AGCD01012842;GBDI01026373;XM_005378081;XM_005378083;XM_013511226 XP_005378138;XP_005378140;XP_013366680 MODEL 8774473 protein-coding Rfx1 regulatory factor X1 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 32710135 32737918 - 102008620 AGCD01016731;AGCD01016732;GBCC01047226;XM_005381077;XM_013512197 XP_005381134;XP_013367651 MODEL 8935685 protein-coding LOC102007062 S-phase kinase-associated protein 1-like NW_004955445 2496144 2496743 - 102007062 AGCD01039356;XM_005392261 XP_005392318 MODEL 8895869 protein-coding LOC102019692 phospholipid scramblase 1-like NW_004955474 11087013 11105735 + 102019692 AGCD01054609;AGCD01054610;GBDK01263372;XM_005401437 XP_005401494 MODEL 8945384 protein-coding Aspg asparaginase ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); asparaginase activity (ortholog); INVOLVED IN asparagine metabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Anaphylaxis (ortholog); anemia (ortholog); Charcot-Marie-Tooth disease axonal type 2O (ortholog) NW_004955538 2765215 2785390 + 102022121 AGCD01071138;AGCD01071139;GBDK01337693;XM_005410824;XM_005410825;XM_005410826;XM_005410827;XR_001232094;XR_264804 XP_005410881;XP_005410882;XP_005410883;XP_005410884 MODEL 9036198 protein-coding LOC102017334 ADP-ribosylation factor 2-like NW_004955478 10548443 10575590 - 102017334 AGCD01056134;AGCD01056135;AGCD01056136;AGCD01056137;GBDF01074230;XM_013503250;XM_013503251 XP_013358704;XP_013358705 MODEL 8886433 protein-coding Apopt1 apoptogenic 1, mitochondrial INVOLVED IN intrinsic apoptotic signaling pathway (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); positive regulation of cytochrome-c oxidase activity (ortholog); ASSOCIATED WITH cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); mitochondrial complex IV deficiency nuclear type 1 (ortholog); FOUND IN matrix side of mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955538 2415781 2432742 + 102011243 AGCD01071125;GBDF01003006;XM_005410782 XP_005410839 MODEL 8920367 protein-coding Ptgr1 prostaglandin reductase 1 ENCODES a protein that exhibits 13-lipoxin reductase activity (ortholog); 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); 2-alkenal reductase (NADPH) activity (ortholog); INVOLVED IN leukotriene B4 metabolic process (ortholog); lipoxin A4 metabolic process (ortholog); negative regulation of positive chemotaxis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Experimental Liver Neoplasms (ortholog); hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955419 15708456 15738774 + 102009949 AGCD01020087;AGCD01020088;AGCD01020089;GBDK01361003;XM_005382721;XM_005382722 XP_005382778;XP_005382779 MODEL 8951452 protein-coding Plekhf1 pleckstrin homology and FYVE domain containing 1 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN endosome organization (ortholog); positive regulation of autophagy (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog) NW_004955468 7934024 7943499 - 102012182 AGCD01052017;GBBH01126266;XM_005400111 XP_005400168 MODEL 9001346 protein-coding LOC102003548 olfactory receptor 1P1-like NW_004955481 207227 208174 - 102003548 AGCD01056784;XM_005402914 XP_005402971 MODEL 9020884 pseudo LOC102018098 dnaJ homolog subfamily A member 1 pseudogene NW_004955420 13182480 13183950 + 102018098 AGCD01020916 MODEL 8934546 protein-coding LOC102005263 E3 ubiquitin-protein ligase TRIM38-like NW_004955483 1063852 1071092 + 102005263 AGCD01057639;XM_013503764 XP_013359218 MODEL 8912391 protein-coding Tigd4 tigger transposable element derived 4 NW_004955471 7221636 7238289 - 102028953 AGCD01053142;AGCD01053143;GBCB01089350;XM_005400910;XM_013522901;XM_013522902 XP_005400967;XP_013378355;XP_013378356 MODEL 39131719 rrna 5S_rRNA 5S ribosomal RNA 39132452 rrna 5S_rRNA 5S ribosomal RNA 9009321 protein-coding Fam81b family with sequence similarity 81 member B NW_004955418 17080146 17126868 - 102029630 AGCD01019143;AGCD01019144;GBDF01002963;XM_013513073;XM_013513074;XM_013513075;XM_013513076 XP_013368527;XP_013368528;XP_013368529;XP_013368530 MODEL 8720686 protein-coding Hemk2 HemK methyltransferase 2, ETF1 glutamine and histone H4 lysine ENCODES a protein that exhibits arsenite methyltransferase activity (ortholog); histone H4K12 methyltransferase activity (ortholog); protein methyltransferase activity (ortholog); INVOLVED IN arsonoacetate metabolic process (ortholog); methylation (ortholog); negative regulation of gene expression, epigenetic (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955407 28256654 28277514 + 102023329 AGCD01007579;AGCD01007580;GBCB01099656;XM_005375604;XM_005375607;XR_259592 XP_005375661;XP_005375664 MODEL 8923284 protein-coding Kif3c kinesin family member 3C ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); atrial fibrillation (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); growth cone (ortholog) NW_004955469 7960224 8001161 - 102008840 AGCD01052441;AGCD01052442;GBDJ01220336;XM_005400416 XP_005400473 MODEL 10190575 ncrna LOC106147124 uncharacterized LOC106147124 NW_004955520 2824557 2825296 - 106147124 AGCD01068083;XR_001231883 MODEL 8826820 protein-coding Gemin8 gem nuclear organelle associated protein 8 INVOLVED IN spliceosomal snRNP assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955519 4205660 4228174 + 102021476 AGCD01067981;GBDK01285087;XM_005409185 XP_005409242 MODEL 8827924 protein-coding Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif 18 INVOLVED IN eye development (ortholog); negative regulation of platelet aggregation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog) NW_004955522 530752 666752 - 102006602 AGCD01068347;AGCD01068348;AGCD01068349;GBCE01042223;GBCQ01172399;XM_013507112 XP_013362566 MODEL 39133930 misc_rna 7SK 7SK RNA 8982998 pseudo LOC102012478 60S ribosomal protein L39 pseudogene NW_004955442 7979367 7988554 - 102012478 AGCD01037634;AGCD01037635;XM_005391201;XM_005391202 MODEL 39131843 snrna U1 U1 spliceosomal RNA 8869230 protein-coding Dnajc12 DnaJ heat shock protein family (Hsp40) member C12 ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) NW_004955425 20202264 20236416 - 102029418 AGCD01025720;AGCD01025721;AGCD01025722;GBCQ01121999;XM_005385971;XM_013514902;XM_013514903;XM_013514904;XM_013514905;XM_013514906;XM_013514907;XM_013514908;XR_001234300;XR_001234301 XP_005386028;XP_013370356;XP_013370357;XP_013370358;XP_013370359;XP_013370360;XP_013370361;XP_013370362 MODEL 8769781 protein-coding Catsper4 cation channel sperm associated 4 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sodium ion transport (ortholog); sperm capacitation (ortholog); FOUND IN acrosomal vesicle (ortholog); CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955439 21098751 21111906 + 102015772 AGCD01036138;GBDF01045912;XM_005390713 XP_005390770 MODEL 39134509 misc_rna 7SK 7SK RNA 9065770 protein-coding Ttll2 tubulin tyrosine ligase like 2 NW_004956465 383 1677 + 102021616 AGCD01079643;XM_013510227 XP_013365681 MODEL 8744735 protein-coding Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); cellular response to peptide (ortholog); regulation of RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Experimental Autoimmune Orchitis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 937706 944969 + 102006213 AGCD01007944;GBCE01002251;GBCQ01011447;XM_005376023;XM_005376024;XM_005376025;XM_013507922;XM_013507925 XP_005376080;XP_005376081;XP_005376082;XP_013363376;XP_013363379 MODEL 9063794 protein-coding Wdr49 WD repeat domain 49 ASSOCIATED WITH prostate cancer (ortholog) NW_004955448 16701241 16840180 - 102011823 AGCD01041701;AGCD01041702;AGCD01041703;GBDK01313375;XM_013518658;XM_013518659;XM_013518660;XM_013518661;XM_013518662;XM_013518663 XP_013374112;XP_013374113;XP_013374114;XP_013374115;XP_013374116;XP_013374117 MODEL 8733767 protein-coding LOC102015083 uncharacterized LOC102015083 NW_004955409 29656707 29658949 + 102015083 AGCD01010278;GBCE01141162;GBDF01012029;XM_013510388 XP_013365842 MODEL 8993830 protein-coding Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); developmental pigmentation (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak Syndrome 11 (ortholog); platelet storage pool deficiency (ortholog); FOUND IN BLOC-1 complex (ortholog); microvesicle (ortholog); transport vesicle (ortholog) NW_004955465 5910095 5943996 + 102025889 AGCD01050435;AGCD01050436;GBCQ01069346;XM_005398846;XM_005398848 XP_005398903;XP_005398905 MODEL 9000005 pseudo LOC102003550 lysine--tRNA ligase-like NW_004955418 23372260 23375258 + 102003550 AGCD01019301 MODEL 39134194 misc_rna 7SK 7SK RNA 9065643 protein-coding Pdlim2 PDZ and LIM domain 2 ENCODES a protein that exhibits alpha-actinin binding (ortholog); filamin binding (ortholog); muscle alpha-actinin binding (ortholog); INVOLVED IN protein catabolic process (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); focal adhesion (ortholog) NW_004955403 46006255 46019865 + 102011939 AGCD01002847;AGCD01002848;GBDK01117944;XM_005373679;XM_005373680;XM_005373681;XM_013513882 XP_005373736;XP_005373737;XP_005373738;XP_013369336 MODEL 9004919 protein-coding LOC102018101 arylacetamide deacetylase-like 4 NW_004955486 1192855 1214886 - 102018101 AGCD01058932;AGCD01058933;AGCD01058934;AGCD01058935;GBCE01042716;XM_013504149 XP_013359603 MODEL 8857193 protein-coding Ptgr2 prostaglandin reductase 2 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); zinc ion binding (ortholog); INVOLVED IN prostaglandin metabolic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog) NW_004955523 1519767 1549998 - 102024499 AGCD01068523;AGCD01068524;AGCD01068525;GBCQ01000257;XM_005409413 XP_005409470 MODEL 8909981 protein-coding LOC102022478 ATP synthase F(0) complex subunit C1, mitochondrial-like NW_004955464 4261213 4261795 - 102022478 AGCD01049986;XM_013521673 XP_013377127 MODEL 9023434 protein-coding Tsbp1 testis expressed basic protein 1 NW_004955437 830178 915199 - 102007696 AGCD01034169;AGCD01034170;AGCD01034171;AGCD01034172;AGCD01034173;AGCD01034174;GBDF01082664;XM_013516714;XM_013516715;XM_013516716;XM_013516717 XP_013372168;XP_013372169;XP_013372170;XP_013372171 MODEL 8929995 protein-coding LOC102010059 olfactory receptor 2M5-like NW_004955418 30041497 30084803 - 102010059 AGCD01019499;AGCD01019500;AGCD01019501;AGCD01019502;AGCD01019503;XM_013512879 XP_013368333 MODEL 8704413 protein-coding Chd4 chromodomain helicase DNA binding protein 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); double-strand break repair via homologous recombination (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autistic disorder (ortholog); brain disease (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); cerebellar granule cell to Purkinje cell synapse (ortholog); chromosome, telomeric region (ortholog) NW_004955413 4191619 4228225 - 102015302 AGCD01013601;AGCD01013602;AGCD01013603;AGCD01013604;GBDK01016911;XM_005378770;XM_013511310;XM_013511311;XM_013511312 XP_005378827;XP_013366764;XP_013366765;XP_013366766 MODEL 8914164 protein-coding Trmt5 tRNA methyltransferase 5 INVOLVED IN mitochondrial tRNA methylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 26 (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955466 8679795 8690203 + 102014123 AGCD01050997;GBBH01052220;XM_005399167;XM_013521928;XM_013521929;XM_013521930;XM_013521931 XP_005399224;XP_013377382;XP_013377383;XP_013377384;XP_013377385 MODEL 9000084 protein-coding Irak1 interleukin 1 receptor associated kinase 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); identical protein binding (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to heat (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); asthma (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955580 663651 668622 - 102009440 AGCD01075618;GBBH01032142;GBCB01007238;XM_013509690 XP_013365144 MODEL 8911970 protein-coding Gpcpd1 glycerophosphocholine phosphodiesterase 1 ENCODES a protein that exhibits glycerophosphocholine phosphodiesterase activity (ortholog); INVOLVED IN skeletal muscle tissue development (ortholog); ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955415 16062068 16118029 - 102012532 AGCD01016366;AGCD01016367;AGCD01016368;AGCD01016369;AGCD01016370;GBCB01020026;XM_013512296;XM_013512297;XM_013512298;XM_013512300 XP_013367750;XP_013367751;XP_013367752;XP_013367754 MODEL 8705224 protein-coding Alk ALK receptor tyrosine kinase ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN adult behavior (ortholog); brain development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anaplastic large cell lymphoma (ortholog); Brain Neoplasms (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955469 11049373 11751235 - 102019052 AGCD01052554;AGCD01052555;AGCD01052556;AGCD01052557;AGCD01052558;AGCD01052559;AGCD01052560;AGCD01052561;AGCD01052562;AGCD01052563;AGCD01052564;AGCD01052565;AGCD01052566;GBCQ01044578;XM_005400546 XP_005400603 MODEL 8920470 protein-coding Fkbp1a FKBP prolyl isomerase 1A ENCODES a protein that exhibits activin receptor binding (ortholog); calcium channel regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cytokine-mediated signaling pathway (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Barth syndrome (ortholog); congenital heart disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955596 580106 606210 - 102014630 AGCD01076523;AGCD01076524;GBCB01000555;XM_005414705;XM_005414706;XM_013510019;XM_013510020 XP_005414762;XP_005414763;XP_013365473;XP_013365474 MODEL 8786325 protein-coding Tpr translocated promoter region, nuclear basket protein ENCODES a protein that exhibits chromatin binding (ortholog); dynein complex binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to interferon-alpha (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); ASSOCIATED WITH Autosomal Recessive Intellectual Developmental Disorder 79 (ortholog); intellectual disability (ortholog); Thyroid Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic dynein complex (ortholog); kinetochore (ortholog) NW_004955406 24742525 24805989 - 102011731 AGCD01006207;GBBH01166944;XM_005375082;XM_005375083 XP_005375139;XP_005375140 MODEL 9003282 ncrna LOC102019693 uncharacterized LOC102019693 NW_004955416 7298910 7308048 + 102019693 AGCD01016971;AGCD01016972;GBDF01144819;XR_260364 MODEL 8945798 pseudo LOC102017342 tumor protein D52 pseudogene NW_004955419 28917493 28928278 + 102017342 AGCD01020479 MODEL 8991045 protein-coding Barx2 BARX homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage condensation (ortholog); myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); transcription regulator complex (ortholog) NW_004955412 30345837 30418186 + 102017210 AGCD01013298;GBCB01038794;XM_005378547 XP_005378604 MODEL 39133339 snrna U4 U4 spliceosomal RNA 8916289 protein-coding App amyloid beta precursor protein ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); apolipoprotein binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcoholic hepatitis (ortholog); FOUND IN amyloid-beta complex (ortholog); apical part of cell (ortholog); astrocyte projection (ortholog) NW_004955407 25725259 25973582 - 102019139 AGCD01007516;AGCD01007517;AGCD01007518;AGCD01007519;AGCD01007520;AGCD01007521;GBCE01002176;JN633556;XM_005375592;XM_005375593;XM_005375594;XM_005375595;XM_005375597;XM_005375598 AEO95223;XP_005375649;XP_005375650;XP_005375651;XP_005375652;XP_005375654;XP_005375655 MODEL 8710151 ncrna LOC102019985 uncharacterized LOC102019985 NW_004955409 34993912 35001323 - 102019985 AGCD01010413;GBDF01176152;XR_259802 MODEL 8738091 protein-coding Atp6v1g1 ATPase H+ transporting V1 subunit G1 ENCODES a protein that exhibits ATPase binding (ortholog); proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); FOUND IN cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); lysosomal membrane (ortholog) NW_004955419 13047755 13056113 - 102009948 AGCD01019995;GBDF01008199;XM_005382627 XP_005382684 MODEL 9026626 protein-coding Fam89a family with sequence similarity 89 member A ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955492 7646755 7665500 + 102024920 AGCD01060802;GBDF01249083;GBDK01038947;XM_005405021 XP_005405078 MODEL 8995596 protein-coding Eapp E2F associated phosphoprotein INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 26383618 26411738 + 102007089 AGCD01010180;GBDF01004579;XM_005376941 XP_005376998 MODEL 8874933 protein-coding Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); adenosine metabolic process (ortholog); amino acid metabolic process (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN actin filament (ortholog); BLOC-1 complex (ortholog); cell body (ortholog) NW_004955409 7902125 7913966 - 102019250 AGCD01009369;GBBH01116617;XM_005376726;XM_005376727 XP_005376783;XP_005376784 MODEL 8938460 protein-coding Tigd5 tigger transposable element derived 5 NW_004955454 2299244 2304795 + 102023225 AGCD01045015;GBCE01018783;XM_013520026 XP_013375480 MODEL 10229378 ncrna LOC106150098 uncharacterized LOC106150098 NW_004955406 23931360 23980352 + 106150098 AGCD01006186;GBDF01181440;XR_001236708 MODEL 8836743 protein-coding LOC102007067 laminin subunit alpha-3-like NW_004955402 12016293 12019255 + 102007067 AGCD01000337;XM_005372709 XP_005372766 MODEL 8714909 protein-coding Pdlim3 PDZ and LIM domain 3 ENCODES a protein that exhibits actinin binding (ortholog); cytoskeletal protein binding (ortholog); structural constituent of muscle (ortholog); INVOLVED IN actin filament organization (ortholog); heart development (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); Z disc (ortholog) NW_004955403 23546291 23579975 + 102023423 AGCD01002248;GBCB01003860;XM_005373451;XM_005373453;XM_005373455 XP_005373508;XP_005373510;XP_005373512 MODEL 8905968 protein-coding Rfx2 regulatory factor X2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN acrosome assembly (ortholog); cellular response to leukemia inhibitory factor (ortholog); cilium assembly (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955495 3414737 3485393 + 102017583 AGCD01061856;AGCD01061857;AGCD01061858;AGCD01061859;AGCD01061860;AGCD01061861;GBDF01044808;XM_005405732;XM_005405733;XM_005405735;XM_005405736;XM_005405737;XM_005405739;XM_005405740;XM_013505325;XM_013505326 XP_005405789;XP_005405790;XP_005405792;XP_005405793;XP_005405794;XP_005405796;XP_005405797;XP_013360779;XP_013360780 MODEL 8995336 protein-coding Asph aspartate beta-hydroxylase ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); calcium ion homeostasis (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Bile Duct Neoplasms (ortholog); cholangiocarcinoma (ortholog); Ectopia Lentis, Spontaneous Filtering Blebs, and Craniofacial Dysmorphism (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955444 17116060 17320966 + 102027913 AGCD01039209;AGCD01039210;AGCD01039211;AGCD01039212;AGCD01039213;GBCB01088404;GBDI01074700;XM_013518174;XM_013518175 XP_013373628;XP_013373629 MODEL 9058534 protein-coding Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif 19 INVOLVED IN aortic valve morphogenesis (ortholog); collagen fibril organization (ortholog); mitral valve morphogenesis (ortholog); ASSOCIATED WITH aortic valve disease (ortholog); CARDIAC VALVULAR DYSPLASIA 2 (ortholog); genetic disease (ortholog) NW_004955415 2384530 2617454 + 102008401 AGCD01015904;AGCD01015905;AGCD01015906;AGCD01015907;GBCB01066284;XM_005380553;XM_005380554;XM_005380555 XP_005380610;XP_005380611;XP_005380612 MODEL 8803754 protein-coding LOC102021482 sperm acrosome membrane-associated protein 4-like NW_004955437 249864 253964 - 102021482 AGCD01034115;GBCE01030987;XM_013516852;XM_013516853;XR_001235059;XR_001235060 XP_013372306;XP_013372307 MODEL 8813315 protein-coding Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activity (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein import into nucleus (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955491 5546097 5573866 + 102004939 AGCD01060489;AGCD01060490;GBBH01092057;GBCE01032301;XM_013504620 XP_013360074 MODEL 8855956 protein-coding Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 INVOLVED IN endosome organization (ortholog); regulation of early endosome to late endosome transport (ortholog); regulation of early endosome to recycling endosome transport (ortholog); PARTICIPATES IN altered retromer-mediated pathway; Parkinson's disease pathway; retromer-mediated pathway; ASSOCIATED WITH essential tremor (ortholog); late onset Parkinson's disease (ortholog); Parkinson's disease (ortholog); FOUND IN early endosome membrane (ortholog); endosome membrane (ortholog); WASH complex (ortholog) NW_004955501 5980407 6111424 - 102007035 AGCD01064176;AGCD01064177;AGCD01064178;GBBH01051729;GBCQ01064951;XM_005406836 XP_005406893 MODEL 8924749 protein-coding LOC102024164 elongation factor 1-alpha 1-like NW_004955437 17981299 17983136 + 102024164 AGCD01034770;AGCD01034771;XM_013516741 XP_013372195 MODEL 8965077 protein-coding Plekhf2 pleckstrin homology and FYVE domain containing 2 FOUND IN transport vesicle (ortholog) NW_004955417 11261712 11282038 + 102003868 AGCD01018128;AGCD01018129;GBDF01183993;XM_005381827 XP_005381884 MODEL 8961068 protein-coding LOC102005270 uncharacterized LOC102005270 NW_004955494 876724 895412 - 102005270 AGCD01061387;AGCD01061388;GBDI01038326;XM_013505014;XR_001231324;XR_001231325;XR_001231326;XR_001231327 XP_013360468 MODEL 39134378 misc_rna 7SK 7SK RNA 8938823 protein-coding Catsperb cation channel sperm associated auxiliary subunit beta ASSOCIATED WITH male infertility (ortholog); FOUND IN CatSper complex (ortholog); cilium (ortholog); sperm principal piece (ortholog) NW_004955438 13822642 13978777 - 102012246 AGCD01035313;AGCD01035314;AGCD01035315;AGCD01035316;AGCD01035317;AGCD01035318;AGCD01035319;AGCD01035320;AGCD01035321;AGCD01035322;AGCD01035323;AGCD01035324;AGCD01035325;AGCD01035326;GBDF01004774;XM_013517143;XM_013517144 XP_013372597;XP_013372598 MODEL 9017765 protein-coding LOC102019695 coatomer subunit gamma-2-like NW_004955479 11135050 11137352 - 102019695 AGCD01056574;GBCC01046014;XM_005402449 XP_005402506 MODEL 39132462 rrna 5S_rRNA 5S ribosomal RNA 8947834 protein-coding Sf3b1 splicing factor 3b subunit 1 ENCODES a protein that exhibits chromatin binding (ortholog); pre-mRNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chronic myelogenous leukemia, BCR-ABL1 positive (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); nuclear matrix (ortholog) NW_004955403 3134960 3163395 + 102025074 AGCD01001754;GBCC01000595;XM_005373873 XP_005373930 MODEL 10264996 ncrna LOC106147125 uncharacterized LOC106147125 NW_004955520 3906728 3919054 - 106147125 AGCD01068113;GBDF01040809;XR_001231884 MODEL 39133931 misc_rna 7SK 7SK RNA 8932339 protein-coding Atp6v1g2 ATPase H+ transporting V1 subunit G2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); synaptic vesicle membrane (ortholog); vacuolar proton-transporting V-type ATPase complex (ortholog) NW_004955437 86053 88355 - 102010195 AGCD01034101;GBBH01136619;XM_005389315;XM_013516927 XP_005389372;XP_013372381 MODEL 39132367 snrna U6 U6 spliceosomal RNA 9007013 pseudo LOC102010065 plasminogen activator inhibitor 1 RNA-binding protein pseudogene NW_004955424 3444768 3446184 - 102010065 AGCD01024310;XR_261038 MODEL 8893524 protein-coding LOC102006024 ovomucoid-like NW_004955415 5904647 5909835 - 102006024 AGCD01016002;GBDF01085593;XM_005380639 XP_005380696 MODEL 8749301 protein-coding LOC102022480 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase NW_004955465 3703513 3740356 - 102022480 AGCD01050388;AGCD01050389;GBBH01089251;XM_005398839 XP_005398896 MODEL 8725963 protein-coding Irak1bp1 interleukin 1 receptor associated kinase 1 binding protein 1 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH DEVELOPMENTAL DELAY, INTELLECTUAL DISABILITY, OBESITY, AND DYSMORPHIC FEATURES (ortholog); Sjogren's syndrome (ortholog) NW_004955502 6800532 6811214 + 102005063 AGCD01064421;GBCQ01069000;XM_005406903 XP_005406960 MODEL 8899060 protein-coding Ttll3 tubulin tyrosine ligase like 3 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, initiating (ortholog); INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); protein polyglycylation (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) NW_004955561 1330378 1353217 + 102009329 AGCD01073848;AGCD01073849;AGCD01073850;AGCD01073851;GBBH01025151;GBDK01233715;XM_013509082;XM_013509083 XP_013364536;XP_013364537 MODEL 8726862 pseudo LOC102017346 polyadenylate-binding protein-interacting protein 1-like NW_004955420 15919327 15926645 + 102017346 AGCD01020984 MODEL 39131720 rrna 5S_rRNA 5S ribosomal RNA 8802150 protein-coding Basp1 brain abundant membrane attached signal protein 1 ENCODES a protein that exhibits calmodulin binding (ortholog); protein domain specific binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); podocyte differentiation (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); carcinoma (ortholog); FOUND IN chromatin (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955426 6149756 6193222 + 102013190 AGCD01026147;AGCD01026148;GBCB01080674;XM_013514993 XP_013370447 MODEL 9056314 protein-coding LOC102010850 cytochrome P450 1A1 ENCODES a protein that exhibits arachidonate monooxygenase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); amine metabolic process (ortholog); camera-type eye development (ortholog); PARTICIPATES IN gefitinib pharmacokinetics pathway; phase I biotransformation pathway via cytochrome P450; tamoxifen pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955450 3183958 3189488 + 102010850 AGCD01042426;GBDK01432211;XM_005393546;XM_005393547 XP_005393603;XP_005393604 MODEL 8795758 ncrna LOC102018106 uncharacterized LOC102018106 NW_004955422 17085787 17105838 - 102018106 AGCD01022909;AGCD01022910;AGCD01022911;AGCD01022912;GBDJ01421050;XR_001233992 MODEL 8919221 protein-coding Kif4a kinesin family member 4A INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); cerebellar hypoplasia (ortholog); COVID-19 (ortholog); FOUND IN midbody (ortholog) NW_004955475 9845633 9969965 + 102023469 AGCD01055075;AGCD01055076;AGCD01055077;AGCD01055078;AGCD01055079;GBDF01261503;XM_005401621 XP_005401678 MODEL 39133340 snrna U4 U4 spliceosomal RNA 8760438 pseudo LOC102005275 transcription factor BTF3 pseudogene NW_004955497 481788 482491 + 102005275 AGCD01062416 MODEL 8745406 protein-coding Plekhg1 pleckstrin homology and RhoGEF domain containing G1 ASSOCIATED WITH nicotine dependence (ortholog); prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955439 10636444 10755814 - 102004645 AGCD01035887;GBCE01021171;XM_005390587;XM_013517387;XM_013517388 XP_005390644;XP_013372841;XP_013372842 MODEL 39131850 snrna U1 U1 spliceosomal RNA 8793634 protein-coding Tsc1 TSC complex subunit 1 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); adaptive immune response (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anterior segment dysgenesis (ortholog); autism spectrum disorder (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell projection (ortholog) NW_004955513 2197037 2244992 - 102030108 AGCD01066870;AGCD01066871;GBCE01045723;XM_005408396;XM_005408397;XM_005408399;XM_013506599;XM_013506600;XM_013506601;XM_013506602;XM_013506603 XP_005408453;XP_005408454;XP_005408456;XP_013362053;XP_013362054;XP_013362055;XP_013362056;XP_013362057 MODEL 8815151 protein-coding Trmt6 tRNA methyltransferase 6 non-catalytic subunit INVOLVED IN mRNA processing (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955415 16333766 16390112 - 102016916 AGCD01016376;AGCD01016377;AGCD01016378;AGCD01016379;GBCQ01122321;XM_005380851;XM_005380852;XM_013512262 XP_005380908;XP_005380909;XP_013367716 MODEL 39133932 misc_rna 7SK 7SK RNA 8719073 protein-coding Alkal2 ALK and LTK ligand 2 ENCODES a protein that exhibits cytokine activity (ortholog); receptor signaling protein tyrosine kinase activator activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); energy homeostasis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955487 304019 312577 - 102005811 AGCD01059216;AGCD01059217;GBCB01076160;XM_005404337 XP_005404394 MODEL 8770844 protein-coding Tpra1 transmembrane protein adipocyte associated 1 INVOLVED IN embryonic cleavage (ortholog); negative regulation of mitotic cell cycle phase transition (ortholog); FOUND IN plasma membrane (ortholog) NW_004955429 16032247 16041793 + 102029771 AGCD01028826;GBBH01192980;XM_005387055;XM_005387056;XM_013515540 XP_005387112;XP_005387113;XP_013370994 MODEL 8749420 protein-coding Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 ASSOCIATED WITH dilated cardiomyopathy (ortholog); Gitelman syndrome (ortholog); syndromic X-linked intellectual developmental disorder Bain type (ortholog); FOUND IN nucleoplasm (ortholog); postsynaptic density (ortholog); ribonucleoprotein complex (ortholog) NW_004955503 7535987 7541622 + 102027427 AGCD01064795;GBCQ01011461;XM_005406955 XP_005407012 MODEL 8804203 ncrna LOC102015086 uncharacterized LOC102015086 NW_004955461 7750257 7757384 - 102015086 AGCD01048922;GBDF01276556;XR_001236574 MODEL 8771540 protein-coding Rfx3 regulatory factor X3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); cilium assembly (ortholog); cilium-dependent cell motility (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955434 7635363 7910056 - 102019728 AGCD01032243;AGCD01032244;AGCD01032245;AGCD01032246;AGCD01032247;GBDF01254252;XM_005388617;XM_013516355;XM_013516356;XM_013516357;XM_013516358;XM_013516359;XM_013516360 XP_005388674;XP_013371809;XP_013371810;XP_013371811;XP_013371812;XP_013371813;XP_013371814 MODEL 8814118 pseudo LOC102003551 CD63 antigen pseudogene NW_004955484 4514735 4515444 - 102003551 AGCD01058216 MODEL 39134195 misc_rna 7SK 7SK RNA 8845975 protein-coding Wdr5 WD repeat domain 5 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4me1 reader activity (ortholog); histone H3Q5ser reader activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuron projection development (ortholog); peptidyl-lysine methylation (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH congenital heart disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN ATAC complex (ortholog); histone acetyltransferase complex (ortholog); histone methyltransferase complex (ortholog) NW_004955513 3198655 3213754 + 102023728 AGCD01066899;GBDI01187396;XM_005408463;XM_013506677 XP_005408520;XP_013362131 MODEL 8884318 ncrna LOC102024169 uncharacterized LOC102024169 NW_004955443 19903033 19910517 + 102024169 AGCD01038639;GBBH01044033;XR_001235444;XR_001235445;XR_001235446 MODEL 8895854 protein-coding Henmt1 HEN methyltransferase 1 ENCODES a protein that exhibits O-methyltransferase activity (ortholog); RNA methyltransferase activity (ortholog); small RNA 2'-O-methyltransferase activity (ortholog); INVOLVED IN piRNA processing (ortholog); RNA methylation (ortholog); ASSOCIATED WITH azoospermia (ortholog); male infertility (ortholog) NW_004955435 12137537 12154630 - 102019198 AGCD01033134;GBDF01080585;GBDF01080593;XM_005388830;XM_005388831 XP_005388887;XP_005388888 MODEL 8704359 protein-coding LOC102012479 uncharacterized LOC102012479 NW_004955559 461354 469388 - 102012479 AGCD01073586;GBDK01094411;XM_013508927;XM_013508928;XM_013508929;XM_013508930;XM_013508931;XM_013508932;XM_013508933;XM_013508934 XP_013364381;XP_013364382;XP_013364383;XP_013364384;XP_013364385;XP_013364386;XP_013364387;XP_013364388 MODEL 8924612 protein-coding Ptgr3 prostaglandin reductase 3 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955402 58634433 58642498 - 102014848 AGCD01001535;AGCD01001536;AGCD01001537;GBBH01187216;GBCQ01006883;XM_005373085 XP_005373142 MODEL 8885463 protein-coding Appbp2 amyloid beta precursor protein binding protein 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of beige fat cell differentiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasmic vesicle membrane (ortholog); nucleoplasm (ortholog) NW_004955451 1736742 1804776 - 102007840 AGCD01042981;AGCD01042982;AGCD01042983;AGCD01042984;AGCD01042985;AGCD01042986;AGCD01042987;GBDJ01006787;XM_005393963 XP_005394020 MODEL 8910677 ncrna LOC102019697 uncharacterized LOC102019697 NW_004955481 6570579 6592910 + 102019697 AGCD01057031;AGCD01057032;GBDK01219721;XR_001230949 MODEL 8733880 protein-coding Fam89b family with sequence similarity 89 member B ENCODES a protein that exhibits transcription corepressor binding (ortholog); INVOLVED IN establishment of cell polarity (ortholog); negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog) NW_004955422 19690806 19693575 - 102020682 AGCD01023028;AGCD01023029;GBBH01063474;XM_013513869 XP_013369323 MODEL 10390358 protein-coding LOC106147126 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like NW_004955521 1144856 1198489 + 106147126 AGCD01068174;AGCD01068175;AGCD01068176;AGCD01068177;GBDF01023350;GBDJ01208996;XM_013507078 XP_013362532 MODEL 10336183 ncrna LOC106150099 uncharacterized LOC106150099 NW_004955464 5470613 5495391 - 106150099 AGCD01050008;AGCD01050009;GBCQ01109244;XR_001236707 MODEL 8758783 ncrna LOC102007069 uncharacterized LOC102007069 NW_004955402 22117994 22162557 - 102007069 AGCD01000599;AGCD01000600;AGCD01000601;AGCD01000602;GBBH01029920;XR_259062 MODEL 9004566 protein-coding Tigit T cell immunoreceptor with Ig and ITIM domains ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of interleukin-12 production (ortholog); negative regulation of natural killer cell mediated cytotoxicity (ortholog); negative regulation of T cell activation (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955427 14358326 14381074 + 102009969 AGCD01027271;GBBH01008722;XM_005386413 XP_005386470 MODEL 8708707 protein-coding Ears2 glutamyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); glutamate-tRNA(Gln) ligase activity (ortholog); INVOLVED IN glutamyl-tRNA aminoacylation (ortholog); tRNA aminoacylation for mitochondrial protein translation (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 12 (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrion (ortholog) NW_004955493 2083272 2113403 - 102021021 AGCD01060925;AGCD01060926;GBCQ01035758;XM_005405096;XM_013504806;XM_013504807;XM_013504808 XP_005405153;XP_013360260;XP_013360261;XP_013360262 MODEL 8896886 protein-coding Kif5a kinesin family member 5A ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 25 (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); central region of growth cone (ortholog) NW_004955458 5264274 5310962 + 102030391 AGCD01047470;AGCD01047471;AGCD01047472;AGCD01047473;AGCD01047474;GBDF01176835;XM_005397522 XP_005397579 MODEL 8935942 protein-coding Sf3b2 splicing factor 3b subunit 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); Goldenhar syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955422 19242041 19266479 - 102020130 AGCD01022989;AGCD01022990;GBBH01033396;GBDF01043546;XM_005384431 XP_005384488 MODEL 39132368 snrna U6 U6 spliceosomal RNA 8913450 protein-coding Gpd1 glycerol-3-phosphate dehydrogenase 1 ENCODES a protein that exhibits glycerol-3-phosphate dehydrogenase (quinone) activity (ortholog); glycerol-3-phosphate dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to tumor necrosis factor (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN D-glycericacidemia pathway; electron transport chain pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); Hypertriglyceridemia, Transient Infantile (ortholog); FOUND IN cytosol (ortholog) NW_004955547 676661 683906 + 102014610 AGCD01072171;GBCQ01010073;XM_005411873 XP_005411930 MODEL 9032619 protein-coding LOC102021483 HLA class II histocompatibility antigen, DQ beta 1 chain-like NW_004955437 1393285 1399648 - 102021483 AGCD01034205;GBBH01003753;XM_005389455 XP_005389512 MODEL 8893293 protein-coding Dnajc14 DnaJ heat shock protein family (Hsp40) member C14 ENCODES a protein that exhibits dopamine receptor binding (ortholog); G protein-coupled receptor binding (ortholog) NW_004955458 3454894 3467546 - 102022888 AGCD01047302;AGCD01047303;GBCE01004932;XM_005397265 XP_005397322 MODEL 8926719 protein-coding Agbl1 AGBL carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN C-terminal protein deglutamylation (ortholog); protein side chain deglutamylation (ortholog); ASSOCIATED WITH Corneal Dystrophy, Fuchs Endothelial, 8 (ortholog); Fuchs' endothelial dystrophy (ortholog) NW_004955416 17885757 18686124 - 102011442 AGCD01017393;AGCD01017394;AGCD01017395;AGCD01017396;AGCD01017397;AGCD01017398;AGCD01017399;AGCD01017400;AGCD01017401;AGCD01017402;AGCD01017403;AGCD01017404;AGCD01017405;AGCD01017406;AGCD01017407;AGCD01017408;AGCD01017409;AGCD01017410;GBDI01046647;XM_005381584;XM_005381585;XM_013512654 XP_005381641;XP_005381642;XP_013368108 MODEL 8900333 pseudo LOC102019987 cysteine--tRNA ligase, cytoplasmic pseudogene NW_004955410 17020172 17021805 - 102019987 AGCD01010979;XR_259908 MODEL 8952635 protein-coding Gen1 GEN1 structure-specific endonuclease ENCODES a protein that exhibits 5'-flap endonuclease activity (ortholog); crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); positive regulation of mitotic cell cycle spindle assembly checkpoint (ortholog); regulation of centrosome duplication (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Hereditary Neoplastic Syndromes (ortholog); prostate cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955469 552850 590792 + 102007001 AGCD01052227;AGCD01052228;AGCD01052229;GBDJ01319147;XM_005400326;XM_005400328 XP_005400383;XP_005400385 MODEL 39134379 misc_rna 7SK 7SK RNA 8916763 protein-coding LOC102017348 uncharacterized LOC102017348 NW_004955491 8307194 8311326 + 102017348 AGCD01060613;GBBH01075393;XM_005404861;XM_005404862 XP_005404918;XP_005404919 MODEL 8773875 protein-coding Catsperd cation channel sperm associated auxiliary subunit delta INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); spermatogenesis (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955495 3663878 3711595 - 102006365 AGCD01061874;AGCD01061875;AGCD01061876;AGCD01061877;AGCD01061878;AGCD01061879;GBDF01045800;XM_005406146 XP_005406203 MODEL 39132463 rrna 5S_rRNA 5S ribosomal RNA 39131721 rrna 5S_rRNA 5S ribosomal RNA 8716021 protein-coding Ttll4 tubulin tyrosine ligase like 4 ENCODES a protein that exhibits protein-glutamic acid ligase activity (ortholog); tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN peptidyl-glutamic acid modification (ortholog); protein polyglutamylation (ortholog); regulation of blastocyst development (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog) NW_004955453 14679945 14720025 - 102005219 AGCD01044871;AGCD01044872;AGCD01044873;GBDK01078009;XM_013519796;XM_013519797;XM_013519798;XM_013519799;XM_013519800;XM_013519801 XP_013375250;XP_013375251;XP_013375252;XP_013375253;XP_013375254;XP_013375255 MODEL 8871430 pseudo LOC102018108 60S ribosomal protein L9 pseudogene NW_004955424 10648402 10648984 - 102018108 AGCD01024523 MODEL 8983318 protein-coding Rfx4 regulatory factor X4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); cilium assembly (ortholog); dorsal spinal cord development (ortholog); FOUND IN nucleus (ortholog) NW_004955405 40483391 40648992 + 102022457 AGCD01005518;AGCD01005519;AGCD01005520;AGCD01005521;AGCD01005522;GBDF01004566;XM_005374622;XM_005374623;XM_005374624;XM_005374625 XP_005374679;XP_005374680;XP_005374681;XP_005374682 MODEL 8851772 protein-coding Bltp1 bridge-like lipid transfer protein family member 1 INVOLVED IN endocytic recycling (ortholog); endosomal transport (ortholog); lipid transport (ortholog); ASSOCIATED WITH Alkuraya-Kucinskas syndrome (ortholog); clubfoot (ortholog); Dandy-Walker syndrome (ortholog) NW_004955428 18224987 18424425 - 102016180 AGCD01028058;AGCD01028059;AGCD01028060;AGCD01028061;AGCD01028062;AGCD01028063;GBDJ01004871;XM_005386777;XM_013515288;XM_013515289;XM_013515290;XM_013515291;XM_013515292;XM_013515293;XM_013515294;XM_013515295 XP_005386834;XP_013370742;XP_013370743;XP_013370744;XP_013370745;XP_013370746;XP_013370747;XP_013370748;XP_013370749 MODEL 8925348 ncrna LOC102005277 uncharacterized LOC102005277 NW_004955425 6668270 6682257 - 102005277 AGCD01025372;GBDF01088350;XR_001234268;XR_001234269 MODEL 8767681 protein-coding LOC102010067 basic proline-rich protein-like NW_004955424 20327818 20328443 - 102010067 AGCD01024848;GBBH01018048;GBDK01212327;XM_013514645 XP_013370099 MODEL 8777360 protein-coding Atp6v1g3 ATPase H+ transporting V1 subunit G3 ENCODES a protein that exhibits ATPase binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955406 34910498 34927745 - 102029041 AGCD01006515;GBCC01042330;XM_005375134 XP_005375191 MODEL 8708731 ncrna LOC102022481 uncharacterized LOC102022481 NW_004955465 10453747 10455158 + 102022481 AGCD01050510;GBCQ01164306;XR_263266 MODEL 8938549 protein-coding Pdlim4 PDZ and LIM domain 4 ENCODES a protein that exhibits actinin binding (ortholog); alpha-actinin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); excitatory chemical synaptic transmission (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); Neurodevelopmental Disorders (ortholog); osteoporosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955408 3638264 3647792 + 102027382 AGCD01008068;GBDI01120451;GBDJ01024225;XM_013508295 XP_013363749 MODEL 8946333 protein-coding Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif 2 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); lung development (ortholog); protein processing (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome dermatosparaxis type (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955408 1157826 1367146 + 102006981 AGCD01007952;AGCD01007953;AGCD01007954;AGCD01007955;GBBH01172277;XM_013507291 XP_013362745 MODEL 8871156 protein-coding Asphd1 aspartate beta-hydroxylase domain containing 1 ASSOCIATED WITH spondylocostal dysostosis 5 (ortholog) NW_004955493 7055944 7076802 - 102005944 AGCD01061154;GBDI01165003;XM_005405229;XM_005405230;XM_013504791;XM_013504792;XM_013504793;XM_013504794;XM_013504795;XM_013504796;XM_013504797 XP_005405286;XP_005405287;XP_013360245;XP_013360246;XP_013360247;XP_013360248;XP_013360249;XP_013360250;XP_013360251 MODEL 8887927 pseudo LOC102006025 copine-8 pseudogene NW_004955474 8226314 8227620 + 102006025 AGCD01054546 MODEL 8973023 protein-coding Trmt61a tRNA methyltransferase 61A ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Cornelia de Lange syndrome (ortholog) NW_004955538 2383666 2393667 + 102010944 AGCD01071124;GBDI01164437;XM_005410781 XP_005410838 MODEL 9036278 protein-coding Tprg1 tumor protein p63 regulated 1 FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955420 18632583 18853032 - 102019278 AGCD01021047;AGCD01021048;AGCD01021049;AGCD01021050;AGCD01021051;GBCC01000366;XM_005383239;XM_013513625;XM_013513626 XP_005383296;XP_013369079;XP_013369080 MODEL 8924097 protein-coding Irak2 interleukin 1 receptor associated kinase 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); interleukin-1-mediated signaling pathway (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway NW_004955561 1585842 1650268 + 102018037 AGCD01073856;AGCD01073857;AGCD01073858;GBDK01284117;XM_005413066 XP_005413123 MODEL 8943551 protein-coding LOC102003553 somatomedin-B and thrombospondin type-1 domain-containing protein-like NW_004955420 12198618 12206853 + 102003553 AGCD01020857;GBDF01251527;XM_005383099 XP_005383156 MODEL 8783600 protein-coding Chd5 chromodomain helicase DNA binding protein 5 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cerebral cortex neuron differentiation (ortholog); chromatin remodeling (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); nuclear speck (ortholog) NW_004955486 6320380 6369020 + 102014675 AGCD01059118;AGCD01059119;GBDJ01304435;XM_005404102;XM_005404103;XM_005404104;XM_005404105 XP_005404159;XP_005404160;XP_005404161;XP_005404162 MODEL 8789175 protein-coding Batf basic leucine zipper ATF-like transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN defense response to protozoan (ortholog); DNA damage response (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955523 42365 66103 - 102008763 AGCD01068430;AGCD01068431;AGCD01068432;AGCD01068433;GBDK01429928;XM_005409366 XP_005409423 MODEL 39133230 snrna U4 U4 spliceosomal RNA 9015417 protein-coding Fkbp1b FKBP prolyl isomerase 1B ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium channel regulator activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); insulin secretion (ortholog); negative regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); catecholaminergic polymorphic ventricular tachycardia (ortholog); FOUND IN calcium channel complex (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955469 6263271 6274823 + 102023893 AGCD01052376;GBCB01028793;GBDF01063636;XM_005400373 XP_005400430 MODEL 39131856 snrna U1 U1 spliceosomal RNA 8847297 protein-coding Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); maturity-onset diabetes of the young type 14 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955430 6986977 7018938 + 102014270 AGCD01029331;GBCB01040671;GBDJ01235305;XM_005387408 XP_005387465 MODEL 8976803 protein-coding Ptgs1 prostaglandin-endoperoxide synthase 1 ENCODES a protein that exhibits oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); peroxidase activity (ortholog); prostaglandin-endoperoxide synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); learning (ortholog); maintenance of blood-brain barrier (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Anaphylaxis (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) NW_004955419 5678750 5699305 - 102008534 AGCD01019834;GBCQ01066127;XM_005382532;XM_013513294 XP_005382589;XP_013368748 MODEL 39133933 misc_rna 7SK 7SK RNA 8876350 pseudo LOC102007072 60S ribosomal protein L5-like NW_004955450 3079256 3080465 - 102007072 AGCD01042421 MODEL 10066968 ncrna LOC106150100 uncharacterized LOC106150100 NW_004955464 2671479 2673194 - 106150100 AGCD01049965;GBDF01114972;XR_001236709 MODEL 39132369 snrna U6 U6 spliceosomal RNA 8703225 protein-coding Alkbh1 alkB homolog 1, histone H2A dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent tRNA 5-methylcytidine formyltransferase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); INVOLVED IN DNA repair (ortholog); oxidative RNA demethylation (ortholog); positive regulation of gene expression, epigenetic (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955438 1531114 1556483 - 102019107 AGCD01034986;GBDK01361284;XM_005390212;XM_013517181 XP_005390269;XP_013372635 MODEL 8715598 pseudo LOC102015088 eukaryotic translation initiation factor 5 pseudogene NW_004955411 11502058 11504279 + 102015088 AGCD01011822 MODEL 8785101 pseudo LOC102010851 transmembrane protein 69 pseudogene NW_004955402 725985 734220 - 102010851 AGCD01000031 MODEL 8740586 pseudo LOC102019991 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955464 6397755 6398993 + 102019991 AGCD01050025 MODEL 8709553 ncrna LOC102024170 uncharacterized LOC102024170 NW_004955445 701392 713169 + 102024170 AGCD01039323;GBDK01292464;XR_001235572;XR_001235573;XR_262289 MODEL 8851349 protein-coding Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif 20 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of melanocyte differentiation (ortholog); ASSOCIATED WITH cleft lip (ortholog); melanoma (ortholog); FOUND IN extracellular space (ortholog) NW_004955500 2688281 2850667 - 102004184 AGCD01063712;AGCD01063713;AGCD01063714;AGCD01063715;AGCD01063716;AGCD01063717;AGCD01063718;GBCB01027734;GBCB01112256;XM_005406579 XP_005406636 MODEL 9012823 protein-coding Plekhg2 pleckstrin homology and RhoGEF domain containing G2 INVOLVED IN regulation of actin filament polymerization (ortholog); ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); LEUKODYSTROPHY AND ACQUIRED MICROCEPHALY WITH OR WITHOUT DYSTONIA (ortholog); microcephaly (ortholog) NW_004955468 138262 149480 - 102022068 AGCD01051683;AGCD01051684;GBBH01065682;XM_013522376 XP_013377830 MODEL 39131722 rrna 5S_rRNA 5S ribosomal RNA 8926086 protein-coding Tsc2 TSC complex subunit 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); GTPase activator activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN anoikis (ortholog); cellular response to insulin stimulus (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mitogen activated protein kinase signaling pathway; mTOR signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Acute Hepatitis (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN caveola (ortholog); cell projection (ortholog); cytoplasm (ortholog) NW_004955442 15178356 15216978 - 102006398 AGCD01037860;GBDI01113122;XM_005391468;XM_005391470;XM_013517657;XM_013517658;XM_013517660;XM_013517661;XM_013517662 XP_005391525;XP_005391527;XP_013373111;XP_013373112;XP_013373114;XP_013373115;XP_013373116 MODEL 8895000 protein-coding Fam8a1 family with sequence similarity 8 member A1 FOUND IN Hrd1p ubiquitin ligase complex (ortholog) NW_004955483 8460337 8469632 - 102022704 AGCD01057836;AGCD01057837;GBDF01082503;XM_013503833 XP_013359287 MODEL 8787657 protein-coding Timcc TIM double twin CX3C motif chaperone ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955424 14837264 14841354 + 102005819 AGCD01024660;GBBH01228913;XM_005385615 XP_005385672 MODEL 8889940 protein-coding Fkbp2 FKBP prolyl isomerase 2 NW_004955422 20834741 20837594 - 102017784 AGCD01023092;GBBH01031180;XM_005384627;XM_005384628;XM_005384630;XM_005384631;XM_005384632 XP_005384684;XP_005384685;XP_005384687;XP_005384688;XP_005384689 MODEL 8822157 pseudo LOC102022482 transcription initiation factor TFIID subunit 11 pseudogene NW_004955465 7669723 7670348 - 102022482 AGCD01050465 MODEL 8881967 ncrna LOC102010070 uncharacterized LOC102010070 NW_004955500 4830109 4994911 - 102010070 AGCD01063812;AGCD01063813;AGCD01063814;AGCD01063815;AGCD01063816;AGCD01063817;AGCD01063818;AGCD01063819;AGCD01063820;GBBH01147088;XR_001231473;XR_001231474;XR_001231475;XR_001231476;XR_001231477;XR_001231478;XR_001231479;XR_001231480;XR_001231481;XR_001231482;XR_001231483;XR_264227 MODEL 8945418 protein-coding Ebag9 estrogen receptor binding site associated antigen 9 INVOLVED IN adaptive immune memory response involving T cells and B cells (ortholog); T cell mediated cytotoxicity (ortholog); ASSOCIATED WITH breast cancer (ortholog); breast ductal carcinoma (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); secretory granule (ortholog) NW_004955417 16941035 16958876 + 102024334 AGCD01018278;AGCD01018279;GBDF01089049;XM_013512747 XP_013368201 MODEL 8990412 protein-coding Gpd1l glycerol-3-phosphate dehydrogenase 1 like ENCODES a protein that exhibits sodium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN NAD+ metabolic process (ortholog); positive regulation of protein localization to cell surface (ortholog); positive regulation of sodium ion transport (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 2 (ortholog); cardiomyopathy (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955430 23481957 23536407 + 102025034 AGCD01029824;GBBH01035409;XM_005387525 XP_005387582 MODEL 39134196 misc_rna 7SK 7SK RNA 8732073 protein-coding Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 INVOLVED IN cellular response to starvation (ortholog); negative regulation of mitochondrial electron transport, NADH to ubiquinone (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955518 941610 1016097 + 102005292 AGCD01067750;AGCD01067751;AGCD01067752;AGCD01067753;AGCD01067754;GBCQ01153813;XM_005409057;XM_013506969 XP_005409114;XP_013362423 MODEL 39134380 misc_rna 7SK 7SK RNA 8918957 pseudo LOC102012481 uncharacterized LOC102012481 NW_004955446 7640915 7696303 + 102012481 AGCD01040126;AGCD01040127;AGCD01040128 MODEL 8807236 protein-coding Catspere catsper channel auxiliary subunit epsilon FOUND IN sperm end piece (ortholog); sperm midpiece (ortholog); sperm principal piece (ortholog) NW_004955406 7716831 7861390 + 102005994 AGCD01005774;AGCD01005775;AGCD01005776;AGCD01005777;AGCD01005778;AGCD01081638;GBDF01052108;XM_005374775;XM_013520364;XM_013520365;XM_013520368;XM_013520372;XM_013520373 XP_005374832;XP_013375818;XP_013375819;XP_013375822;XP_013375826;XP_013375827 MODEL 8786479 protein-coding Hepacam hepatic and glial cell adhesion molecule INVOLVED IN protein localization to cell-cell junction (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN astrocyte end-foot (ortholog); cell-cell junction (ortholog) NW_004955412 25981235 25998296 - 102016462 AGCD01013183;GBBH01057749;XM_005378447;XM_013510951 XP_005378504;XP_013366405 MODEL 8948764 protein-coding Trmt61b tRNA methyltransferase 61B ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); rRNA (adenine) methyltransferase activity (ortholog); tRNA (adenine(58)-N1)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial tRNA processing (ortholog); mRNA processing (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955469 10744814 10771560 - 102014440 AGCD01052549;GBDI01162186;XM_013522617 XP_013378071 MODEL 39132469 rrna 5S_rRNA 5S ribosomal RNA 8711463 protein-coding LOC102017351 olfactory receptor 7D4-like NW_004955495 294354 343997 + 102017351 AGCD01061618;AGCD01061619;AGCD01061620;AGCD01061621;AGCD01061622;AGCD01061623;AGCD01061624;XM_005405554 XP_005405611 MODEL 8858821 ncrna LOC102018111 uncharacterized LOC102018111 NW_004955499 5787418 5804841 - 102018111 AGCD01063529;GBDJ01146430;XR_264221 MODEL 8984092 protein-coding LOC102019700 carbohydrate sulfotransferase 6 NW_004955484 2028332 2038105 + 102019700 AGCD01058079;AGCD01058080;AGCD01058081;GBDF01189982;XM_005403442;XM_005403443;XM_005403444;XM_005403445;XM_013503855;XM_013503856 XP_005403499;XP_005403500;XP_005403501;XP_005403502;XP_013359309;XP_013359310 MODEL 9062876 pseudo LOC102005282 uncharacterized protein C8orf59 homolog NW_004955429 2855876 2858540 - 102005282 AGCD01028442 MODEL 8931707 ncrna LOC102021485 uncharacterized LOC102021485 NW_004955437 18547542 18548483 - 102021485 AGCD01034802;GBDJ01307924;XR_261893 MODEL 8986002 protein-coding Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 INVOLVED IN epithelial cell differentiation (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955425 20619212 20631915 + 102004297 AGCD01025750;AGCD01025751;GBCE01002270;XM_005385979;XM_005385981;XM_005385983 XP_005386036;XP_005386038;XP_005386040 MODEL 8833910 protein-coding Ptgs2 prostaglandin-endoperoxide synthase 2 ENCODES a protein that exhibits enzyme binding (ortholog); heme binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955406 25077988 25086259 - 102014110 AGCD01006213;AGCD01006214;GBCQ01175625;GBDJ01276049;XM_005375091 XP_005375148 MODEL 39133934 misc_rna 7SK 7SK RNA 8979095 protein-coding LOC102006026 cystatin-13-like NW_004955415 30473505 30482358 + 102006026 AGCD01016664;GBDF01008193;XM_005380973 XP_005381030 MODEL 8936567 protein-coding Get1 guided entry of tail-anchored proteins factor 1 INVOLVED IN otic vesicle development (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN GET complex (ortholog) NW_004955407 38160951 38168808 + 102022784 AGCD01007798;GBDF01120917;XM_005375768 XP_005375825 MODEL 8769497 ncrna LOC102003554 uncharacterized LOC102003554 NW_004955420 23737531 23739070 - 102003554 AGCD01021255;GBBH01155304;XR_001233760;XR_260743 MODEL 8942549 protein-coding Alkbh2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); cytosine C-5 DNA demethylase activity (ortholog); INVOLVED IN DNA alkylation repair (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 10258736 10265100 - 102030040 AGCD01045950;GBDJ01275521;XM_013520492 XP_013375946 MODEL 10362257 ncrna LOC106147127 uncharacterized LOC106147127 NW_004955521 3261506 3302262 - 106147127 AGCD01068228;AGCD01068229;XR_001231885 MODEL 9059472 protein-coding LOC102019992 arginyl-tRNA--protein transferase 1-like NW_004955411 24882254 24883938 - 102019992 AGCD01012140;XM_013510718 XP_013366172 MODEL 39133232 snrna U4 U4 spliceosomal RNA 8702063 protein-coding Bltp2 bridge-like lipid transfer protein family member 2 ASSOCIATED WITH prostate cancer (ortholog) NW_004955481 4509840 4544706 + 102029080 AGCD01056943;GBCE01116508;GBCQ01065420;XM_005402743 XP_005402800 MODEL 8743853 protein-coding Chd6 chromodomain helicase DNA binding protein 6 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); transcription coregulator binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH neuroblastoma (ortholog); Prostatic Neoplasms (ortholog); transitional cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955445 15360074 15576410 + 102028808 AGCD01039843;AGCD01039844;AGCD01039845;AGCD01039846;AGCD01039847;GBDF01040678;XM_005392507;XM_005392508;XM_005392509;XM_013518270;XM_013518271;XM_013518272;XM_013518273;XM_013518274 XP_005392564;XP_005392565;XP_005392566;XP_013373724;XP_013373725;XP_013373726;XP_013373727;XP_013373728 MODEL 8814627 protein-coding Batf2 basic leucine zipper ATF-like transcription factor 2 INVOLVED IN defense response to protozoan (ortholog); myeloid dendritic cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); melanoma (ortholog) NW_004955422 20188965 20195886 + 102021137 AGCD01023068;GBCE01003452;XM_005384530;XM_005384531 XP_005384587;XP_005384588 MODEL 8923785 protein-coding Kif5b kinesin family member 5B ENCODES a protein that exhibits identical protein binding (ortholog); JUN kinase binding (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to type II interferon (ortholog); centrosome localization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mitochondria transport pathway; N-cadherin signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); diabetes mellitus (ortholog); epilepsy (ortholog); FOUND IN axonal growth cone (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) NW_004955429 23632246 23678797 - 102003570 AGCD01029075;AGCD01029076;AGCD01029077;AGCD01029078;GBBH01116411;GBDF01157819;XM_005387221 XP_005387278 MODEL 8708546 protein-coding Catsperg cation channel sperm associated auxiliary subunit gamma FOUND IN sperm principal piece (ortholog) NW_004955468 1056197 1099804 - 102016464 AGCD01051749;AGCD01051750;AGCD01051751;AGCD01051752;AGCD01051753;AGCD01051754;AGCD01051755;AGCD01051756;GBDF01008471;GBDI01315833;XM_013522464 XP_013377918 MODEL 9037771 pseudo LOC102017352 heterogeneous nuclear ribonucleoprotein K pseudogene NW_004955423 5154401 5156628 + 102017352 AGCD01023556;XR_261018 MODEL 8740288 protein-coding Rfx5 regulatory factor X5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of MHC class II biosynthetic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH MHC class II deficiency (ortholog); MHC CLASS II DEFICIENCY 1 (ortholog); MHC CLASS II DEFICIENCY 3 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955588 687086 695696 - 102004022 AGCD01076118;GBCQ01031430;XM_005414519;XM_005414520;XM_005414522;XM_005414523;XM_013509923;XM_013509924;XM_013509925 XP_005414576;XP_005414577;XP_005414579;XP_005414580;XP_013365377;XP_013365378;XP_013365379 MODEL 8740399 protein-coding Pdlim5 PDZ and LIM domain 5 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN cell growth involved in cardiac muscle cell development (ortholog); regulation of dendritic spine morphogenesis (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Crohn's disease (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 5109778 5312192 + 102011944 AGCD01004674;AGCD01004675;AGCD01004676;AGCD01004677;AGCD01004678;AGCD01004679;GBCE01117951;XM_005374259;XM_005374260;XM_005374261;XM_005374262;XM_005374263;XM_005374265;XM_005374266;XM_013517363;XM_013517385 XP_005374316;XP_005374317;XP_005374318;XP_005374319;XP_005374320;XP_005374322;XP_005374323;XP_013372817;XP_013372839 MODEL 8922430 protein-coding Atp6v1h ATPase H+ transporting V1 subunit H ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN endocytosis (ortholog); synaptic vesicle lumen acidification (ortholog); FOUND IN cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog) NW_004955454 13099488 13213018 - 102004237 AGCD01045428;AGCD01045429;AGCD01045430;AGCD01045431;GBCE01095685;XM_005396063;XM_005396064;XM_005396065 XP_005396120;XP_005396121;XP_005396122 MODEL 39132476 rrna 5S_rRNA 5S ribosomal RNA 8985510 protein-coding Wdr53 WD repeat domain 53 NW_004955420 12694208 12714613 - 102013299 AGCD01020884;AGCD01020885;GBDI01358032;XM_005383136;XM_005383137;XM_005383138;XM_013513504 XP_005383193;XP_005383194;XP_005383195;XP_013368958 MODEL 8910531 protein-coding Agbl3 AGBL carboxypeptidase 3 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN protein side chain deglutamylation (ortholog) NW_004955494 7497964 7570137 - 102015734 AGCD01061553;GBCE01111503;XM_005405496;XM_013504930;XM_013504931;XM_013504932;XM_013504933;XM_013504934;XM_013504935;XM_013504936;XM_013504937;XM_013504938 XP_005405553;XP_013360384;XP_013360385;XP_013360386;XP_013360387;XP_013360388;XP_013360389;XP_013360390;XP_013360391;XP_013360392 MODEL 10346100 ncrna LOC106150101 uncharacterized LOC106150101 NW_004955464 12711358 12726752 + 106150101 AGCD01050219;AGCD01050220;AGCD01050221;XR_001236715 MODEL 8843577 protein-coding Tprg1l tumor protein p63 regulated 1 like ENCODES a protein that exhibits calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); negative regulation of synaptic transmission (ortholog); regulation of synaptic transmission, glutamatergic (ortholog); FOUND IN calyx of Held (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog) NW_004955486 8007678 8013996 - 102027308 AGCD01059145;GBDF01009572;XM_005404149 XP_005404206 MODEL 8818579 protein-coding Irak3 interleukin 1 receptor associated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 12839995 12880285 + 102010132 AGCD01047791;GBDJ01062726;XM_013520896 XP_013376350 MODEL 8864079 ncrna LOC102015089 uncharacterized LOC102015089 NW_004955464 6232396 6252099 - 102015089 AGCD01050019;XR_263206 MODEL 8827207 ncrna LOC102010852 uncharacterized LOC102010852 NW_004955450 14836986 14845311 - 102010852 AGCD01042764;GBDF01009911;XR_262554;XR_262555 MODEL 39134197 misc_rna 7SK 7SK RNA 8927652 protein-coding Gpd2 glycerol-3-phosphate dehydrogenase 2 ENCODES a protein that exhibits glycerol-3-phosphate dehydrogenase (quinone) activity (ortholog); INVOLVED IN camera-type eye development (ortholog); gluconeogenesis (ortholog); glycerol-3-phosphate metabolic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; electron transport chain pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); maturity-onset diabetes of the young type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955449 16695855 16804184 - 102017931 AGCD01042224;AGCD01042225;GBCB01006034;XM_005393414;XM_005393415 XP_005393471;XP_005393472 MODEL 8800621 protein-coding Dnajc16 DnaJ heat shock protein family (Hsp40) member C16 INVOLVED IN regulation of autophagosome size (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955527 2576861 2609925 - 102011801 AGCD01069453;AGCD01069454;AGCD01069455;GBCE01183033;XM_005409868;XM_005409869;XM_005409870;XM_013507424 XP_005409925;XP_005409926;XP_005409927;XP_013362878 MODEL 9048803 protein-coding Adamts3 ADAM metallopeptidase with thrombospondin type 1 motif 3 ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN collagen biosynthetic process (ortholog); in utero embryonic development (ortholog); positive regulation of vascular endothelial growth factor signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hennekam Lymphangiectasia-Lymphedema Syndrome 3 (ortholog); prostate cancer (ortholog); FOUND IN extracellular space (ortholog) NW_004955447 803287 1036435 + 102019752 AGCD01040487;AGCD01040488;AGCD01040489;AGCD01040490;AGCD01040491;GBCE01120181;XM_005392768 XP_005392825 MODEL 8812534 protein-coding Sf3b3 splicing factor 3b subunit 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of protein catabolic process (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955484 3307794 3357600 + 102004819 AGCD01058172;AGCD01058173;AGCD01058174;AGCD01058175;AGCD01058176;GBDF01118268;XM_005403485 XP_005403542 MODEL 8993567 protein-coding Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); cold acclimation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); substance-related disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early phagosome (ortholog) NW_004955405 39503020 39540069 - 102016558 AGCD01005501;GBCQ01070746;XM_005374608;XM_013518984;XM_013518992;XM_013518995 XP_005374665;XP_013374438;XP_013374446;XP_013374449 MODEL 8852543 ncrna LOC102007073 uncharacterized LOC102007073 NW_004955450 13276074 13290515 - 102007073 AGCD01042733;GBDF01306692;XR_262551;XR_262552 MODEL 9005667 pseudo LOC102018113 periphilin-1 pseudogene NW_004955503 1977626 1979433 + 102018113 AGCD01064593;XM_005406925 MODEL 10329813 ncrna LOC106147128 uncharacterized LOC106147128 NW_004955521 3747314 3771135 - 106147128 AGCD01068243;AGCD01068244;AGCD01068245;GBDI01145169;XR_001231886 MODEL 8777023 protein-coding Tsc22d1 TSC22 domain family member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of hematopoietic stem cell proliferation (ortholog); negative regulation of programmed cell death (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955518 2322566 2451519 - 102010937 AGCD01067775;AGCD01067776;AGCD01067777;AGCD01067778;GBDF01010659;GBDF01010660;XM_005409075 XP_005409132 MODEL 9065200 protein-coding Timd4 T cell immunoglobulin and mucin domain containing 4 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian cyst (ortholog); FOUND IN plasma membrane (ortholog) NW_004955408 10969413 10998042 - 102019476 AGCD01008280;AGCD01008281;AGCD01008282;GBBH01126834;XM_013506889;XM_013506895;XM_013506900 XP_013362343;XP_013362349;XP_013362354 MODEL 8846969 protein-coding Fam91a1 family with sequence similarity 91 member A1 INVOLVED IN intracellular protein transport (ortholog); vesicle tethering to Golgi (ortholog); FOUND IN cytoplasmic vesicle (ortholog); trans-Golgi network (ortholog) NW_004955540 2561695 2600144 + 102004422 AGCD01071321;AGCD01071322;AGCD01071323;GBCB01034996;XM_005410932 XP_005410989 MODEL 39132371 snrna U6 U6 spliceosomal RNA 8837453 protein-coding Fkbp3 FKBP prolyl isomerase 3 FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955409 16810934 16824380 + 102007864 AGCD01009743;AGCD01009744;GBDF01000475;XM_005376860 XP_005376917 MODEL 8843804 ncrna LOC102010072 uncharacterized LOC102010072 NW_004955426 20756048 20787650 - 102010072 AGCD01026575;GBBH01059919;XR_001234330;XR_001234331;XR_001234332 MODEL 8997473 protein-coding Ttll5 tubulin tyrosine ligase like 5 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); protein polyglutamylation (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); choroidal sclerosis (ortholog); cone-rod dystrophy (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955612 109742 351255 + 102020184 AGCD01077180;GBDF01005906;GBDI01323312;XM_005414949;XM_005414950;XM_005414953;XM_005414957;XM_005414958;XM_005414959;XM_005414960;XM_013510126;XM_013510127 XP_005415006;XP_005415007;XP_005415010;XP_005415014;XP_005415015;XP_005415016;XP_005415017;XP_013365580;XP_013365581 MODEL 8704139 protein-coding LOC102024173 testis-specific serine/threonine-protein kinase 1-like NW_004955446 5256392 5257796 - 102024173 AGCD01040061;GBDK01384059;XM_005392640 XP_005392697 MODEL 8794617 protein-coding LOC102006031 zinc finger protein 14-like NW_004955417 31556784 31573000 - 102006031 AGCD01018655;AGCD01018656;GBDJ01003802;XM_013512775 XP_013368229 MODEL 8942875 protein-coding Wdr54 WD repeat domain 54 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of receptor internalization (ortholog); regulation of epidermal growth factor receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955424 11358694 11362138 - 102003257 AGCD01024564;GBDK01237577;XM_005385517;XM_005385518;XM_005385519 XP_005385574;XP_005385575;XP_005385576 MODEL 9063495 protein-coding Pdlim7 PDZ and LIM domain 7 INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of osteoblast differentiation (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytoplasm (ortholog) NW_004955408 29718830 29734085 - 102028503 AGCD01008768;AGCD01008769;GBDI01008588;XM_005376443;XM_005376444;XM_005376445;XM_005376446;XM_013506529 XP_005376500;XP_005376501;XP_005376502;XP_005376503;XP_013361983 MODEL 39131863 snrna U1 U1 spliceosomal RNA 39131723 rrna 5S_rRNA 5S ribosomal RNA 8866413 protein-coding Asphd2 aspartate beta-hydroxylase domain containing 2 NW_004955455 1030962 1039129 + 102013797 AGCD01045568;GBDF01220555;GBDF01220556;XM_013520382 XP_013375836 MODEL 9038918 protein-coding Hepacam2 HEPACAM family member 2 INVOLVED IN centrosome cycle (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN centrosome (ortholog); Golgi apparatus (ortholog); midbody (ortholog) NW_004955432 10088162 10128169 - 102008340 AGCD01030925;AGCD01030926;AGCD01030927;GBCQ01154442;XM_005388031;XM_005388032;XM_005388033;XM_005388034;XM_013515908 XP_005388088;XP_005388089;XP_005388090;XP_005388091;XP_013371362 MODEL 9039962 protein-coding LOC102019702 uncharacterized LOC102019702 NW_004955486 2317123 2335680 + 102019702 AGCD01058995;GBDF01249891;XM_005404303 XP_005404360 MODEL 39134198 misc_rna 7SK 7SK RNA 8762999 protein-coding Trmt9b tRNA methyltransferase 9B (putative) ENCODES a protein that exhibits tRNA methyltransferase activity (ortholog) NW_004955463 4035145 4096996 - 102015816 AGCD01049600;AGCD01049601;GBDJ01298592;XM_013521538;XM_013521539;XM_013521540;XM_013521541;XM_013521542;XM_013521543;XM_013521544;XM_013521545;XM_013521546;XM_013521547;XM_013521548;XM_013521549;XM_013521550;XM_013521551;XM_013521552;XM_013521553;XM_013521554;XM_013521555;XM_013521556;XM_013521557;XM_013521558;XM_013521559 XP_013376992;XP_013376993;XP_013376994;XP_013376995;XP_013376996;XP_013376997;XP_013376998;XP_013376999;XP_013377000;XP_013377001;XP_013377002;XP_013377003;XP_013377004;XP_013377005;XP_013377006;XP_013377007;XP_013377008;XP_013377009;XP_013377010;XP_013377011;XP_013377012;XP_013377013 MODEL 39133233 snrna U4 U4 spliceosomal RNA 8865016 protein-coding Gper1 G protein-coupled estrogen receptor 1 ENCODES a protein that exhibits chromatin binding (ortholog); estradiol binding (ortholog); G protein-coupled estrogen receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); apoptotic chromosome condensation (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN bisphenol A response pathway; epidermal growth factor/neuregulin signaling pathway; estrogen signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); Dysbiosis (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasm (ortholog) NW_004955460 8790798 8794902 + 102014650 AGCD01048531;GBCQ01162951;XM_005397796 XP_005397853 MODEL 9059283 protein-coding Bltp3a bridge-like lipid transfer protein family member 3A ENCODES a protein that exhibits histone deacetylase binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); systemic lupus erythematosus (ortholog); FOUND IN late endosome (ortholog) NW_004955437 2844544 2905073 + 102012244 AGCD01034288;AGCD01034289;AGCD01034290;AGCD01034291;AGCD01034292;GBDF01200537;XM_005390117 XP_005390174 MODEL 10222175 protein-coding Catsperh catsper channel auxiliary subunit eta FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955422 20108510 20110493 + 106148485 AGCD01023066;GBDF01222835;XM_013514195;XM_013514196 XP_013369649;XP_013369650 MODEL 8809666 protein-coding Hnrnpk heterogeneous nuclear ribonucleoprotein K ENCODES a protein that exhibits actinin binding (ortholog); ATPase binding (ortholog); C-rich single-stranded DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); camera-type eye development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Au-Kline Syndrome (ortholog); brain disease (ortholog); FOUND IN axon terminus (ortholog); catalytic step 2 spliceosome (ortholog); cell cortex (ortholog) NW_004955432 3246090 3257774 + 102004629 AGCD01030645;GBDF01010823;XM_005387940;XM_005387941;XM_005387942;XM_005387943;XM_005387944;XM_005387945;XM_005387946 XP_005387997;XP_005387998;XP_005387999;XP_005388000;XP_005388001;XP_005388002;XP_005388003 MODEL 8964960 protein-coding Pth parathyroid hormone ENCODES a protein that exhibits hormone activity (ortholog); parathyroid hormone receptor binding (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN parathyroid hormone signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular space (ortholog) NW_004955414 28828389 28831417 - 102020327 AGCD01015689;GBDF01224218;XM_005380323 XP_005380380 MODEL 8745488 protein-coding Rfx6 regulatory factor X6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN endocrine pancreas development (ortholog); glucose homeostasis (ortholog); pancreatic A cell differentiation (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) NW_004955436 213810 278699 + 102007270 AGCD01033537;AGCD01033538;AGCD01033539;GBDF01078446;XM_005389119 XP_005389176 MODEL 39134381 misc_rna 7SK 7SK RNA 8796980 protein-coding Ebf1 EBF transcription factor 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); follicular lymphoma (ortholog); lipodystrophy (ortholog); FOUND IN nucleus (ortholog) NW_004955408 12735893 13121700 - 102019670 AGCD01008343;AGCD01008344;AGCD01008345;AGCD01008346;GBCB01111862;GBCQ01031704;XM_013508845 XP_013364299 MODEL 8845759 protein-coding LOC102012483 olfactory receptor 2B2-like NW_004955576 1406995 1407939 + 102012483 AGCD01075375;XM_005413956 XP_005414013 MODEL 8837623 protein-coding Atp7a ATPase copper transporting alpha ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); blood vessel development (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955557 1355471 1515725 + 102020850 AGCD01073291;AGCD01073292;AGCD01073293;AGCD01073294;AGCD01073295;AGCD01073296;AGCD01073297;AGCD01073298;GBCB01002245;JN633747;XM_005412628;XM_005412629;XM_013508826 AEO95414;XP_005412685;XP_005412686;XP_013364280 MODEL 9045682 protein-coding Agbl4 AGBL carboxypeptidase 4 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN anterograde axonal transport of mitochondrion (ortholog); axonal transport (ortholog); C-terminal protein deglutamylation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); prostate cancer (ortholog); substance-related disorder (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955464 8847401 10195184 + 102030616 AGCD01050097;AGCD01050098;AGCD01050099;AGCD01050100;AGCD01050101;AGCD01050102;AGCD01050103;AGCD01050104;AGCD01050105;AGCD01050106;AGCD01050107;AGCD01050108;AGCD01050109;AGCD01050110;AGCD01050111;AGCD01050112;AGCD01050113;AGCD01050114;AGCD01050115;AGCD01050116;AGCD01050117;AGCD01050118;AGCD01050119;AGCD01050120;GBDF01194814;XM_005398625;XM_005398626;XM_013521735 XP_005398682;XP_005398683;XP_013377189 MODEL 8855668 protein-coding Get3 guided entry of tail-anchored proteins factor 3, ATPase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein carrier chaperone (ortholog); INVOLVED IN tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Dilated Cardiomyopathy 2H (ortholog); prostate cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); GET complex (ortholog); nucleolus (ortholog) NW_004955415 31836294 31843046 + 102020559 AGCD01016698;GBDF01003381;XM_005381023 XP_005381080 MODEL 9016547 protein-coding Tprkb TP53RK binding protein ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 5 (ortholog); nephrotic syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); EKC/KEOPS complex (ortholog) NW_004955424 11961994 11969610 - 102010066 AGCD01024584;GBDI01179923;XM_005385539;XM_005385540;XM_005385541;XM_005385542;XM_005385544 XP_005385596;XP_005385597;XP_005385598;XP_005385599;XP_005385601 MODEL 8788127 protein-coding Plekhg3 pleckstrin homology and RhoGEF domain containing G3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN regulation of cell migration (ortholog); regulation of establishment of cell polarity (ortholog) NW_004955466 5172603 5212518 - 102026957 AGCD01050868;AGCD01050869;GBBH01091213;XM_013521957;XM_013521958;XM_013521959;XM_013521960;XM_013521961;XM_013521963;XM_013521964 XP_013377411;XP_013377412;XP_013377413;XP_013377414;XP_013377415;XP_013377417;XP_013377418 MODEL 8705467 protein-coding Alkbh3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); cytosine C-5 DNA demethylase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA alkylation repair (ortholog); negative regulation of cytoplasmic translation (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 3660504 3695352 - 102024809 AGCD01022526;AGCD01022527;GBCB01024527;XM_005384082;XM_005384083 XP_005384139;XP_005384140 MODEL 8760129 ncrna LOC102024176 uncharacterized LOC102024176 NW_004955448 1571760 1595646 + 102024176 AGCD01041261;AGCD01041262;GBDF01273897;XR_262454 MODEL 8975973 pseudo LOC102005284 olfactory receptor 5B3-like NW_004955511 3132708 3133618 - 102005284 AGCD01066444 MODEL 8992928 protein-coding Dnajc17 DnaJ heat shock protein family (Hsp40) member C17 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955416 7620553 7672344 - 102027404 AGCD01016995;AGCD01016996;AGCD01016997;AGCD01016998;AGCD01016999;AGCD01017000;GBDF01158979;XM_005381263;XM_013512569 XP_005381320;XP_013368023 MODEL 8741089 protein-coding LOC102017358 fatty acid-binding protein, liver-like NW_004955424 740636 747834 - 102017358 AGCD01024204;AGCD01024205;GBCB01092993;XM_013514585 XP_013370039 MODEL 8729807 protein-coding LOC102021486 uncharacterized LOC102021486 NW_004955538 2766334 2771809 - 102021486 AGCD01071138;AGCD01071139;GBBH01020607;XM_005410822;XM_005410823;XM_013507898 XP_005410879;XP_005410880;XP_013363352 MODEL 8984108 protein-coding Pdp1 pyruvate dehydrogenase phosphatase catalytic subunit 1 ENCODES a protein that exhibits [pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity (ortholog); calcium ion binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN peptidyl-threonine dephosphorylation (ortholog); positive regulation of pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); obesity (ortholog); Prostatic Neoplasms (ortholog); FOUND IN mitochondrion (ortholog) NW_004955417 10219096 10227483 + 102022287 AGCD01018070;AGCD01018071;GBDF01053364;XM_005381799;XM_005381800;XM_005381801 XP_005381856;XP_005381857;XP_005381858 MODEL 8815923 protein-coding Kif5c kinesin family member 5C ENCODES a protein that exhibits apolipoprotein receptor binding (ortholog); ATP hydrolysis activity (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); anterograde dendritic transport of messenger ribonucleoprotein complex (ortholog); intracellular mRNA localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Alzheimer's disease 3 (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); complex cortical dysplasia with other brain malformations (ortholog); FOUND IN axonal growth cone (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) NW_004955440 14754931 14854090 + 102017707 AGCD01036479;AGCD01036480;GBDF01250404;XM_013517505 XP_013372959 MODEL 39133935 misc_rna 7SK 7SK RNA 10267281 ncrna LOC106147130 uncharacterized LOC106147130 NW_004955521 2558592 2564053 - 106147130 AGCD01068209;XR_001231887 MODEL 39133237 snrna U4 U4 spliceosomal RNA 10388107 ncrna LOC106150102 uncharacterized LOC106150102 NW_004955464 11450268 11456604 - 106150102 AGCD01050154;GBDF01236342;XR_001236716 MODEL 9032823 ncrna LOC102003556 uncharacterized LOC102003556 NW_004955420 28596394 28604005 + 102003556 AGCD01021480;AGCD01021481;GBBH01098605;XR_001233725;XR_001233726;XR_001233727;XR_001233728;XR_001233729;XR_001233730;XR_260767;XR_260768 MODEL 9047452 ncrna LOC102010853 uncharacterized LOC102010853 NW_004955403 10441158 10452838 + 102010853 AGCD01001921;XR_259168 MODEL 8864084 protein-coding LOC102015092 antigen WC1.1-like NW_004955413 4930253 4971008 + 102015092 AGCD01013640;AGCD01013641;AGCD01013642;AGCD01013643;AGCD01013644;GBDK01258461;XM_005378866;XM_013511514 XP_005378923;XP_013366968 MODEL 39131869 snrna U1 U1 spliceosomal RNA 8876929 protein-coding Irak4 interleukin 1 receptor associated kinase 4 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-33-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic rhinitis (ortholog); Animal Disease Models (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955500 3010505 3039090 + 102005061 AGCD01063725;AGCD01063726;AGCD01063727;GBDF01124062;GBDF01124069;XM_005406580;XM_005406582;XM_005406583;XM_013505686;XM_013505687 XP_005406637;XP_005406639;XP_005406640;XP_013361140;XP_013361141 MODEL 8829995 protein-coding Batf3 basic leucine zipper ATF-like transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN dendritic cell differentiation (ortholog); myeloid dendritic cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH leprosy (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955815 2852 11035 + 102014633 AGCD01078403;GBBH01214177;GBCE01089580;XM_005415122 XP_005415179 MODEL 8980485 protein-coding Aprg1 APRG1 tumor suppressor candidate NW_004955421 4296058 4296534 + 102028426 AGCD01021688;XM_005415366 XP_005415423 MODEL 8724161 protein-coding LOC102022485 intelectin-1a-like NW_004955468 12676510 12685740 - 102022485 AGCD01052176;GBCQ01163630;XM_005400223;XM_005400224;XM_013522494 XP_005400280;XP_005400281;XP_013377948 MODEL 9019059 protein-coding Aspm assembly factor for spindle microtubules ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN brain development (ortholog); cerebral cortex development (ortholog); developmental growth (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autosomal recessive primary microcephaly (ortholog); COVID-19 (ortholog); FOUND IN apical plasma membrane (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955406 33665675 33720468 - 102024187 AGCD01006486;AGCD01006487;GBDK01383873;XM_013521877 XP_013377331 MODEL 39132477 rrna 5S_rRNA 5S ribosomal RNA 9018561 pseudo LOC102007074 60S ribosomal protein L27a pseudogene NW_004955450 9968147 9968719 + 102007074 AGCD01042602 MODEL 8889115 protein-coding LOC102018114 T-cell receptor-associated transmembrane adapter 1 INVOLVED IN negative regulation of receptor recycling (ortholog); negative regulation of transport (ortholog); positive regulation of calcium-mediated signaling (ortholog); FOUND IN centriolar satellite (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) NW_004955427 9665479 9700305 + 102018114 AGCD01027104;GBDI01087718;XM_005386363;XM_013515031;XM_013515032 XP_005386420;XP_013370485;XP_013370486 MODEL 8706237 protein-coding Tsc22d2 TSC22 domain family member 2 INVOLVED IN negative regulation of cell cycle (ortholog); response to osmotic stress (ortholog); ASSOCIATED WITH keratoconus (ortholog) NW_004955448 1639463 1678279 + 102024397 AGCD01041265;GBCE01089585;GBDI01261302;XM_013518634 XP_013374088 MODEL 9023850 protein-coding Fam98a family with sequence similarity 98 member A ENCODES a protein that exhibits protein methyltransferase activity (ortholog); INVOLVED IN lysosome localization (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of gene expression (ortholog) NW_004955441 1799453 1814096 - 102027117 AGCD01036757;AGCD01036758;GBDJ01045504;XM_005390857 XP_005390914 MODEL 8846363 protein-coding Timeless timeless circadian regulator ENCODES a protein that exhibits enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cell cycle phase transition (ortholog); ASSOCIATED WITH advanced sleep phase syndrome 4 (ortholog); alcohol use disorder (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955458 3999143 4029523 - 102009354 AGCD01047360;AGCD01047361;AGCD01047362;GBDF01162534;XM_005397313;XM_013521023 XP_005397370;XP_013376477 MODEL 9016048 pseudo LOC102010073 nef-associated protein 1 pseudogene NW_004955503 3250978 3252092 - 102010073 AGCD01064620 MODEL 8747218 protein-coding Fkbp4 FKBP prolyl isomerase 4 ENCODES a protein that exhibits ATP binding (ortholog); copper-dependent protein binding (ortholog); GTP binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); copper ion transport (ortholog); embryo implantation (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH androgen insensitivity syndrome (ortholog); FOUND IN axonal growth cone (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955429 18334939 18344530 + 102021997 AGCD01028899;AGCD01028900;GBDF01005695;XM_005387116 XP_005387173 MODEL 8745708 ncrna LOC102019993 uncharacterized LOC102019993 NW_004955412 18061832 18081483 - 102019993 AGCD01012924;GBCB01015873;XR_259998 MODEL 8915487 pseudo LOC102012486 histone H3.1-like NW_004955581 100297 101951 + 102012486 AGCD01075657 MODEL 8764228 protein-coding Hnrnpl heterogeneous nuclear ribonucleoprotein L ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA CDS binding (ortholog); pre-mRNA intronic binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH brain cancer (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955468 668177 683540 + 102007877 AGCD01051724;AGCD01051725;GBCQ01011897;XM_005399824;XM_005399826;XM_005399828 XP_005399881;XP_005399883;XP_005399885 MODEL 8834295 protein-coding LOC102006032 ankyrin repeat and KH domain-containing protein 1 NW_004955418 134451 259259 - 102006032 AGCD01018668;AGCD01018669;AGCD01018670;GBDI01137461;XM_005382032;XM_005382034;XM_005382037;XM_013512890;XM_013512892;XM_013512893;XM_013512894;XM_013512895;XM_013512896;XM_013512897 XP_005382089;XP_005382091;XP_005382094;XP_013368344;XP_013368346;XP_013368347;XP_013368348;XP_013368349;XP_013368350;XP_013368351 MODEL 8992464 protein-coding Get4 guided entry of tail-anchored proteins factor 4 ENCODES a protein that exhibits protein carrier chaperone (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN ERAD pathway (ortholog); maintenance of unfolded protein (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIy (ortholog); FOUND IN BAT3 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955460 8620913 8634778 + 102013256 AGCD01048528;GBCB01004484;XM_005397792 XP_005397849 MODEL 39134199 misc_rna 7SK 7SK RNA 9027486 pseudo LOC102019705 citrate synthase, mitochondrial pseudogene NW_004955489 236675 239818 - 102019705 AGCD01059787 MODEL 8925022 protein-coding Alkbh4 alkB homolog 4, lysine demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); actin binding (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); cleavage furrow ingression (ortholog); positive regulation of gene expression, epigenetic (ortholog); FOUND IN contractile ring (ortholog); midbody (ortholog) NW_004955456 15158380 15167318 + 102015079 AGCD01046662;GBCQ01014194;XM_005396835 XP_005396892 MODEL 8807218 protein-coding Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif 4 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); proteoglycan catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH degenerative disc disease (ortholog); osteoarthritis (ortholog); rheumatoid arthritis (ortholog); FOUND IN extracellular space (ortholog); nuclear speck (ortholog) NW_004955468 12950333 12958599 - 102004590 AGCD01052193;GBCE01057297;XM_005400258 XP_005400315 MODEL 8905788 protein-coding Heph hephaestin ENCODES a protein that exhibits ferroxidase activity (ortholog); INVOLVED IN intestinal iron absorption (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); positive regulation of iron export across plasma membrane (ortholog); PARTICIPATES IN iron efflux pathway; ASSOCIATED WITH glaucoma (ortholog); malignant mesothelioma (ortholog); FOUND IN basolateral plasma membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955475 5625177 5704234 + 102010578 AGCD01054924;AGCD01054925;GBCE01090210;XM_005401575;XM_005401576;XM_005401577;XM_005401578;XM_013502889;XM_013502890 XP_005401632;XP_005401633;XP_005401634;XP_005401635;XP_013358343;XP_013358344 MODEL 8906577 protein-coding Sf3b4 splicing factor 3b subunit 4 ENCODES a protein that exhibits splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN nucleus (ortholog); spliceosomal complex (ortholog); U12-type spliceosomal complex (ortholog) NW_004955413 826190 830502 + 102021955 AGCD01013491;GBDF01082584;XM_005378708 XP_005378765 MODEL 9066751 protein-coding Catsperq catsper channel auxiliary subunit theta ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955454 2974713 2976454 - 102024528 AGCD01045044;GBDF01124984;XM_005396110 XP_005396167 MODEL 39133936 misc_rna 7SK 7SK RNA 9026612 protein-coding Pdp2 pyruvate dehyrogenase phosphatase catalytic subunit 2 ENCODES a protein that exhibits [pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN peptidyl-threonine dephosphorylation (ortholog); response to starvation (ortholog); T-helper cell differentiation (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); prostate cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955433 23392193 23396229 + 102024498 AGCD01031959;GBCQ01062937;XM_005388477;XM_005388478;XM_005388479;XM_005388480 XP_005388534;XP_005388535;XP_005388536;XP_005388537 MODEL 10202566 ncrna LOC106147131 uncharacterized LOC106147131 NW_004955521 2847933 2853277 + 106147131 AGCD01068215;XR_001231888 MODEL 39133238 snrna U4 U4 spliceosomal RNA 8788630 protein-coding Pth1r parathyroid hormone 1 receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); parathyroid hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; parathyroid hormone signaling pathway; ASSOCIATED WITH brachydactyly type E1 (ortholog); chondrodysplasia Blomstrand type (ortholog); connective tissue disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955420 25274269 25291984 - 102019506 AGCD01021348;GBDF01221234;XM_013513585 XP_013369039 MODEL 8787342 protein-coding Wdr55 WD repeat domain 55 INVOLVED IN rRNA processing (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955418 33237 37676 - 102025242 AGCD01018664;GBCQ01151900;XM_005382003 XP_005382060 MODEL 8929758 protein-coding Aspn asporin ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN bone mineralization (ortholog); negative regulation of tooth mineralization (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); degenerative disc disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell projection (ortholog); extracellular matrix (ortholog) NW_004955515 5322074 5345715 + 102027220 AGCD01067348;GBDK01137117;XM_005408906 XP_005408963 MODEL 8959807 protein-coding Rfx7 regulatory factor X7 ENCODES a protein that exhibits RNA polymerase II core promoter sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 71 with behavioral abnormalities (ortholog); Familial Prostate Cancer (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) NW_004955409 59535 121157 + 102006985 AGCD01009138;GBDI01261564;XM_005376598;XM_005376600;XM_005376601 XP_005376655;XP_005376657;XP_005376658 MODEL 8863582 protein-coding Chd7 chromodomain helicase DNA binding protein 7 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN adult heart development (ortholog); adult walking behavior (ortholog); aorta development (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH 3MC syndrome (ortholog); 46, XY Disorders of Sex Development (ortholog); 46,XY complete gonadal dysgenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955444 17859999 18067623 - 102029131 AGCD01039226;AGCD01039227;GBDJ01315010;XM_005392181;XM_005392182;XM_005392183 XP_005392238;XP_005392239;XP_005392240 MODEL 39131724 rrna 5S_rRNA 5S ribosomal RNA 9011044 protein-coding LOC102010856 uncharacterized LOC102010856 NW_004955650 98638 101158 + 102010856 AGCD01077799;GBDJ01149179;XM_005415052;XR_001232591 XP_005415109 MODEL 8921573 protein-coding Ebf2 EBF transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); cell fate determination (ortholog) NW_004955403 48674218 48859843 - 102025425 AGCD01002926;AGCD01002927;AGCD01002928;AGCD01002929;GBDI01106348;XM_005373722 XP_005373779 MODEL 8758599 ncrna LOC102024177 uncharacterized LOC102024177 NW_004955448 8662974 8691442 - 102024177 AGCD01041450;GBDF01020951;XR_262465 MODEL 9032861 protein-coding Plekhg4 pleckstrin homology and RhoGEF domain containing G4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH spinocerebellar ataxia 31 (ortholog) NW_004955484 9344830 9356182 - 102006352 AGCD01058415;GBDF01154360;XM_005403662;XM_013503891;XM_013503892 XP_005403719;XP_013359345;XP_013359346 MODEL 39132372 snrna U6 U6 spliceosomal RNA 8883413 protein-coding Fkbp5 FKBP prolyl isomerase 5 ENCODES a protein that exhibits heat shock protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); protein folding (ortholog); response to alcohol (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); asthma (ortholog) NW_004955437 3445515 3548874 - 102029005 AGCD01034318;AGCD01034319;AGCD01034320;AGCD01034321;GBDI01261071;XM_005389562;XM_013516903;XM_013516904 XP_005389619;XP_013372357;XP_013372358 MODEL 9053466 protein-coding Trmu tRNA mitochondrial 2-thiouridylase ASSOCIATED WITH aminoglycoside-induced deafness (ortholog); genetic disease (ortholog); infantile liver failure syndrome (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 30440014 30453860 + 102012183 AGCD01014608;GBDF01131064;XM_005379512;XM_013511394;XM_013511395;XM_013511396 XP_005379569;XP_013366848;XP_013366849;XP_013366850 MODEL 8876978 pseudo LOC102005285 poly [ADP-ribose] polymerase 8 pseudogene NW_004955430 8008251 8010551 - 102005285 AGCD01029378 MODEL 9001759 ncrna LOC102017359 uncharacterized LOC102017359 NW_004955425 3673946 3696655 + 102017359 AGCD01025295;GBDJ01147464;XR_001234286;XR_001234287 MODEL 8835693 protein-coding Bltp3b bridge-like lipid transfer protein family member 3B ENCODES a protein that exhibits GARP complex binding (ortholog); lipid transfer activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); intermembrane lipid transfer (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog) NW_004955405 35814803 35935553 - 102019020 AGCD01005402;AGCD01005403;AGCD01005404;AGCD01005405;GBDJ01165887;XM_013518586 XP_013374040 MODEL 8754969 protein-coding Dnajc18 DnaJ heat shock protein family (Hsp40) member C18 FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955418 1119699 1149891 + 102017570 AGCD01018709;AGCD01018710;AGCD01018711;GBDF01085412;XM_005382068;XM_005382069;XM_005382070 XP_005382125;XP_005382126;XP_005382127 MODEL 8728550 pseudo LOC102019707 translationally-controlled tumor protein pseudogene NW_004955492 4311101 4313699 + 102019707 AGCD01060715 MODEL 8780632 protein-coding Aprt adenine phosphoribosyltransferase ENCODES a protein that exhibits adenine binding (ortholog); adenine phosphoribosyltransferase activity (ortholog); AMP binding (ortholog); INVOLVED IN adenine metabolic process (ortholog); AMP salvage (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenine phosphoribosyltransferase deficiency (ortholog); Breast Neoplasms (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytosol (ortholog) NW_004955541 2687938 2690906 - 102005635 AGCD01071422;GBBH01000927;XM_005411021 XP_005411078 MODEL 39134382 misc_rna 7SK 7SK RNA 8955361 pseudo LOC102018115 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955427 10286735 10287698 + 102018115 AGCD01027142 MODEL 8938936 protein-coding Agbl5 AGBL carboxypeptidase 5 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN C-terminal protein deglutamylation (ortholog); defense response to virus (ortholog); protein branching point deglutamylation (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); retinitis pigmentosa (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); midbody (ortholog) NW_004955469 9023753 9041674 + 102018486 AGCD01052488;GBDF01007627;XM_005400448;XM_005400449;XM_013522608 XP_005400505;XP_005400506;XP_013378062 MODEL 8922156 protein-coding Atp7b ATPase copper transporting beta ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to copper ion (ortholog); cellular response to manganese ion (ortholog); circadian rhythm (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Anhaptoglobinemia (ortholog); Animal Disease Models (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955431 5228395 5297120 - 102005829 AGCD01030017;AGCD01030018;GBBH01116837;XM_005387611;XM_005387612;XM_005387614 XP_005387668;XP_005387669;XP_005387671 MODEL 9042589 protein-coding LOC102015093 olfactory receptor 1468-like NW_004955467 13347163 13348101 + 102015093 AGCD01051671;XM_005399764 XP_005399821 MODEL 8968138 protein-coding Fam98b family with sequence similarity 98 member B ENCODES a protein that exhibits identical protein binding (ortholog); protein methyltransferase activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of gene expression (ortholog); protein methylation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 5457232 5486744 + 102008845 AGCD01016912;AGCD01016913;GBBH01025779;GBDF01193034;XM_013512677 XP_013368131 MODEL 8882475 protein-coding Tprn taperin ENCODES a protein that exhibits actin binding (ortholog); protein phosphatase 1 binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); stereocilium maintenance (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 79 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); microvillus (ortholog); nucleoplasm (ortholog) NW_004955513 5196871 5205945 - 102030460 AGCD01066961;AGCD01066962;GBBH01187440;GBCB01087279;XM_005408661 XP_005408718 MODEL 8721807 ncrna LOC102012487 uncharacterized LOC102012487 NW_004955449 15407328 15451351 + 102012487 AGCD01042194;XR_262507 MODEL 9022670 protein-coding LOC102003559 HRAS-like suppressor 2 NW_004955422 21458082 21474996 + 102003559 AGCD01023119;AGCD01023120;AGCD01023121;GBBH01000367;XM_005384675;XM_013514294;XM_013514295;XM_013514296 XP_005384732;XP_013369748;XP_013369749;XP_013369750 MODEL 39131725 rrna 5S_rRNA 5S ribosomal RNA 9033385 pseudo LOC102021495 vacuole membrane protein 1 pseudogene NW_004955446 12582761 12583969 - 102021495 AGCD01040238 MODEL 8938044 ncrna LOC102006033 uncharacterized LOC102006033 NW_004955481 9531180 9539647 + 102006033 AGCD01057102;GBDF01031476;XR_263796 MODEL 8968803 protein-coding Ireb2 iron responsive element binding protein 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); iron-responsive element binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to hypoxia (ortholog); cellular response to iron(III) ion (ortholog); PARTICIPATES IN doxorubicin response pathway; iron homeostasis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); Brain Hypoxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 852554 898908 + 102010110 AGCD01042344;AGCD01042345;GBDF01157505;XM_005393448 XP_005393505 MODEL 8861182 protein-coding LOC102022486 taste receptor type 2 member 8-like NW_004955413 7969812 7970744 - 102022486 AGCD01013841;XM_005379624 XP_005379681 MODEL 39132485 rrna 5S_rRNA 5S ribosomal RNA 9025142 protein-coding Ttll6 tubulin tyrosine ligase like 6 ENCODES a protein that exhibits protein-glutamic acid ligase activity (ortholog); tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN microtubule bundle formation (ortholog); microtubule severing (ortholog); positive regulation of cilium movement (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955451 12474035 12509104 + 102003400 AGCD01043399;AGCD01043400;GBDK01191894;XM_013519119;XM_013519120 XP_013374573;XP_013374574 MODEL 39132373 snrna U6 U6 spliceosomal RNA 9031978 protein-coding Alkbh5 alkB homolog 5, RNA demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); molecular condensate scaffold activity (ortholog); mRNA N6-methyladenosine dioxygenase activity (ortholog); INVOLVED IN gamma-delta T cell proliferation (ortholog); membraneless organelle assembly (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH multiple myeloma (ortholog); pre-eclampsia (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); paraspeckles (ortholog) NW_004955478 11104445 11128980 - 102022698 AGCD01056160;AGCD01056161;GBCE01115231;XM_005402287;XM_013503226 XP_005402344;XP_013358680 MODEL 8777407 protein-coding Sf3b5 splicing factor 3b subunit 5 ENCODES a protein that exhibits RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U12-type spliceosomal complex (ortholog) NW_004955436 16380412 16381373 + 102004851 AGCD01033915;GBBH01031902;XM_005389240 XP_005389297 MODEL 8748342 protein-coding Hephl1 hephaestin like 1 ENCODES a protein that exhibits ferroxidase activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH Lichen Planus Follicularis (ortholog); Pili Torti, Developmental Delay, Neurological Abnormalities (ortholog) NW_004955414 461212 551323 - 102019262 AGCD01014728;AGCD01014729;AGCD01014730;AGCD01014731;GBDF01027425;XM_005379683 XP_005379740 MODEL 10064462 ncrna LOC106150103 uncharacterized LOC106150103 NW_004955465 569721 597369 - 106150103 AGCD01050309;GBDK01419155;XR_001236717;XR_001236718 MODEL 9065187 protein-coding Timm10 translocase of inner mitochondrial membrane 10 ENCODES a protein that exhibits membrane insertase activity (ortholog); protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); rhabdomyosarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) NW_004955511 2498498 2500828 - 102017900 AGCD01066409;GBCE01052696;XM_005407996 XP_005408053 MODEL 39131875 snrna U1 U1 spliceosomal RNA 9030420 protein-coding Hnrnpll heterogeneous nuclear ribonucleoprotein L like ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of RNA splicing (ortholog); FOUND IN synapse (ortholog) NW_004955441 6229692 6269051 - 102010414 AGCD01036907;AGCD01036908;GBDI01216597;XM_013517617 XP_013373071 MODEL 9041715 protein-coding LOC102010858 heterogeneous nuclear ribonucleoprotein U-like protein 2 NW_004957878 562 1192 + 102010858 AGCD01081274;XM_005415235 XP_005415292 MODEL 8907958 protein-coding Wdr59 WD repeat domain 59 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN GATOR2 complex (ortholog); lysosomal membrane (ortholog) NW_004955484 2576505 2668001 + 102024115 AGCD01058120;AGCD01058121;AGCD01058122;GBDF01195114;XM_005403454;XM_005403455 XP_005403511;XP_005403512 MODEL 8984655 pseudo LOC102012489 B-cell CLL/lymphoma 7 protein family member C pseudogene NW_004955402 2619020 2627815 + 102012489 AGCD01000086 MODEL 9028540 protein-coding Bax BCL2 associated X, apoptosis regulator ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); channel activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic process (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN ceramide signaling pathway; intrinsic apoptotic pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN BAK complex (ortholog); BAX complex (ortholog); Bcl-2 family protein complex (ortholog) NW_004955559 1695960 1700246 - 102027909 AGCD01073660;GBDF01213412;GBDJ01180019;XM_005412921 XP_005412978 MODEL 8949829 protein-coding Kif6 kinesin family member 6 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); aortic dissection (ortholog); coronary artery disease (ortholog); FOUND IN male germ cell nucleus (ortholog) NW_004955437 6353318 6597196 - 102029118 AGCD01034435;AGCD01034436;AGCD01034437;AGCD01034438;AGCD01034439;AGCD01034440;AGCD01034441;GBCE01165390;GBDI01357272;XM_013517003;XM_013517004;XM_013517005 XP_013372457;XP_013372458;XP_013372459 MODEL 8949303 protein-coding LOC102007080 uncharacterized LOC102007080 NW_004955452 2394438 2439074 + 102007080 AGCD01043895;GBDF01015522;XM_005394736;XM_005394737;XR_001236123 XP_005394793;XP_005394794 MODEL 8811549 protein-coding Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 ENCODES a protein that exhibits endopeptidase activity (ortholog); extracellular matrix binding (ortholog); heparin binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); defense response to bacterium (ortholog); endocardial cushion morphogenesis (ortholog); ASSOCIATED WITH degenerative disc disease (ortholog); Hepatomegaly (ortholog); mucopolysaccharidosis VI (ortholog); FOUND IN extracellular space (ortholog) NW_004955407 26597165 26643972 - 102021943 AGCD01007531;GBDI01328672;XM_005375602;XM_005375603 XP_005375659;XP_005375660 MODEL 8979061 protein-coding LOC102003561 BPI fold-containing family A member 2-like NW_004955422 27993083 28136036 + 102003561 AGCD01023340;AGCD01023341;AGCD01023342;AGCD01023343;GBBH01222071;XM_005384852;XM_013514264;XM_013514265;XM_013514266;XM_013514267;XM_013514268;XM_013514269;XM_013514270;XM_013514271;XM_013514273;XM_013514274;XM_013514275 XP_005384909;XP_013369718;XP_013369719;XP_013369720;XP_013369721;XP_013369722;XP_013369723;XP_013369724;XP_013369725;XP_013369727;XP_013369728;XP_013369729 MODEL 8747112 ncrna LOC102017365 uncharacterized LOC102017365 NW_004955511 2487341 2488839 + 102017365 AGCD01066408;GBDF01074018;XR_264419 MODEL 8819676 protein-coding Tsc22d3 TSC22 domain family member 3 ENCODES a protein that exhibits MRF binding (ortholog); INVOLVED IN body fluid secretion (ortholog); negative regulation of activation-induced cell death of T cells (ortholog); negative regulation of skeletal muscle tissue development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hyperinsulinism (ortholog); male infertility (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955490 8177356 8238373 + 102017672 AGCD01060277;GBCE01115007;GBDF01157293;XM_005404695 XP_005404752 MODEL 8834980 protein-coding LOC102022491 olfactory receptor 52I1-like NW_004955414 20188826 20191310 + 102022491 AGCD01015360;XM_013512019 XP_013367473 MODEL 9040258 pseudo LOC102010074 mortality factor 4-like protein 1 pseudogene NW_004955427 22903386 22904350 - 102010074 AGCD01027478 MODEL 39133800 misc_rna 7SK 7SK RNA 9044068 protein-coding Catspert catsper channel auxiliary subunit tau INVOLVED IN calcium ion transmembrane transport (ortholog); flagellated sperm motility (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH prostate cancer (ortholog); spermatogenic failure 68 (ortholog); FOUND IN CatSper complex (ortholog); sperm flagellum (ortholog); sperm principal piece (ortholog) NW_004955493 8356859 8518863 - 102021457 AGCD01061292;AGCD01061293;AGCD01061294;AGCD01061295;AGCD01061296;AGCD01061297;AGCD01061298;AGCD01061299;AGCD01061300;AGCD01061301;AGCD01061302;AGCD01061303;AGCD01061304;AGCD01061305;AGCD01061306;AGCD01061307;GBDF01044480;XM_013504749 XP_013360203 MODEL 39133240 snrna U4 U4 spliceosomal RNA 9015813 protein-coding Pth2 parathyroid hormone 2 NW_004955559 1409966 1414881 + 102017514 AGCD01073644;GBDF01104303;XM_005412886;XM_013509049 XP_005412943;XP_013364503 MODEL 8789901 protein-coding Alkbh6 alkB homolog 6, nucleotide demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955468 2575469 2580632 + 102012522 AGCD01051827;GBDF01126813;XM_005399930;XM_005399933;XM_013522541 XP_005399987;XP_005399990;XP_013377995 MODEL 9045347 protein-coding Rfx8 regulatory factor X8 NW_004955470 7128811 7191466 - 102017765 AGCD01052792;AGCD01052793;AGCD01052794;GBDF01085190;XM_005400761 XP_005400818 MODEL 8966122 ncrna LOC102015097 uncharacterized LOC102015097 NW_004955413 31164764 31170120 - 102015097 AGCD01014620;GBDF01223958;XR_001232954 MODEL 9018695 protein-coding Ager advanced glycosylation end-product specific receptor ENCODES a protein that exhibits advanced glycation end-product binding (ortholog); amyloid-beta binding (ortholog); DNA binding (ortholog); INVOLVED IN astrocyte activation (ortholog); astrocyte development (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN Ras mediated signaling pathway; receptor for advanced glycation end-products signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basal plasma membrane (ortholog) NW_004955437 645482 648607 - 102009984 AGCD01034152;GBDK01021118;XM_005389412;XM_005389414 XP_005389469;XP_005389471 MODEL 8896772 protein-coding LOC102024178 uncharacterized LOC102024178 NW_004955584 208498 209484 - 102024178 AGCD01075926;GBDF01224162;XM_005414409 XP_005414466 MODEL 8925626 protein-coding Fam98c family with sequence similarity 98 member C ASSOCIATED WITH asphyxiating thoracic dystrophy 3 (ortholog); autism spectrum disorder (ortholog) NW_004955468 1021711 1025566 - 102014227 AGCD01051748;GBCE01154383;XM_005399847 XP_005399904 MODEL 8852406 protein-coding Tpst1 tyrosylprotein sulfotransferase 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-tyrosine sulfotransferase activity (ortholog); INVOLVED IN peptidyl-tyrosine sulfation (ortholog); post-translational protein modification (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); colorectal adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi lumen (ortholog); Golgi membrane (ortholog) NW_004955456 8523362 8616891 + 102006316 AGCD01046488;AGCD01046489;AGCD01046490;AGCD01046491;AGCD01046492;AGCD01046493;AGCD01046494;AGCD01046495;AGCD01046496;GBBH01101451;GBDI01220614;XM_005396711;XM_005396714;XM_013520566 XP_005396768;XP_005396771;XP_013376020 MODEL 8786543 protein-coding Ebf3 EBF transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Ataxia (ortholog); autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog) NW_004955477 7435324 7557212 - 102018724 AGCD01055613;AGCD01055614;GBCE01181834;XM_013503101;XM_013503102;XM_013503103;XM_013503104;XM_013503105;XM_013503106;XM_013503107;XM_013503108;XM_013503109;XM_013503110 XP_013358555;XP_013358556;XP_013358557;XP_013358558;XP_013358559;XP_013358560;XP_013358561;XP_013358562;XP_013358563;XP_013358564 MODEL 8990675 ncrna LOC102005286 uncharacterized LOC102005286 NW_004955512 4093717 4097420 - 102005286 AGCD01066728;GBCQ01087532;XR_001231725 MODEL 8755918 protein-coding Fkbp6 FKBP prolyl isomerase family member 6 (inactive) ENCODES a protein that exhibits Hsp90 protein binding (ortholog); identical protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); piRNA processing (ortholog); positive regulation of viral genome replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure 77 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955456 14291445 14318310 - 102029366 AGCD01046638;AGCD01046639;GBDF01051299;XM_005396786 XP_005396843 MODEL 8824098 protein-coding Blvra biliverdin reductase A ENCODES a protein that exhibits biliberdin reductase (NADH) activity (ortholog); biliverdin reductase [NAD(P)H] activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); canonical NF-kappaB signal transduction (ortholog); chemotaxis (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH cholestasis (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955460 129077 167345 - 102010875 AGCD01048335;AGCD01048336;AGCD01048337;GBDI01175001;XM_005397710 XP_005397767 MODEL 8993004 protein-coding Irf1 interferon regulatory factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN apoptotic process (ortholog); canonical NF-kappaB signal transduction (ortholog); CD8-positive, alpha-beta T cell differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; Jak-Stat signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH allergic conjunctivitis (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955408 3882282 3887965 - 102029590 AGCD01008079;GBCQ01125407;GBDK01000102;XM_005376102 XP_005376159 MODEL 9039189 protein-coding LOC102019994 dehydrogenase/reductase SDR family member 7 NW_004955466 9542613 9560806 + 102019994 AGCD01051044;AGCD01051045;AGCD01051046;GBCQ01037460;XM_005399184;XM_005399185 XP_005399241;XP_005399242 MODEL 8925112 protein-coding Pdpk1 3-phosphoinositide dependent protein kinase 1 ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase activity (ortholog); insulin receptor binding (ortholog); phospholipase activator activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell migration (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; angiotensin II signaling pathway; FasL mediated signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); congestive heart failure (ortholog); diffuse large B-cell lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955442 14685089 14772870 - 102020615 AGCD01037832;AGCD01037833;AGCD01037834;AGCD01037835;AGCD01037836;AGCD01037837;AGCD01037838;AGCD01037839;GBCB01023925;XM_005391417;XM_005391418;XM_005391419;XM_005391420;XM_013517782;XM_013517783 XP_005391474;XP_005391475;XP_005391476;XP_005391477;XP_013373236;XP_013373237 MODEL 39132374 snrna U6 U6 spliceosomal RNA 9053850 protein-coding Kif7 kinesin family member 7 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); cerebellar ataxia (ortholog); ciliopathy (ortholog); FOUND IN ciliary basal body (ortholog); ciliary tip (ortholog); cilium (ortholog) NW_004955416 15555959 15570925 + 102027179 AGCD01017335;GBCQ01123519;XM_005381548;XM_005381549;XM_013512554 XP_005381605;XP_005381606;XP_013368008 MODEL 8827226 protein-coding Asprv1 aspartic peptidase retroviral like 1 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); skin development (ortholog); ASSOCIATED WITH genetic disease (ortholog); ichthyosis (ortholog); Lamellar Ichthyosis, Autosomal Dominant Form (ortholog) NW_004955424 15190746 15193270 + 102012003 AGCD01024696;GBDI01226370;XM_005385633 XP_005385690 MODEL 10161952 protein-coding LOC106150104 translation initiation factor IF-2-like NW_004955465 11570585 11572537 - 106150104 AGCD01050527;GBCE01030369;GBDF01111956;XM_013521766 XP_013377220 MODEL 39134072 misc_rna 7SK 7SK RNA 8858084 protein-coding Gpha2 glycoprotein hormone subunit alpha 2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); thyrotropin-releasing hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 20249134 20252329 + 102022826 AGCD01023072;GBCE01092085;XM_005384535;XM_005384536;XM_005384537;XM_005384538;XM_013513969 XP_005384592;XP_005384593;XP_005384594;XP_005384595;XP_013369423 MODEL 8748679 protein-coding ATP8 ATP synthase F0 subunit 8 MT 7771 7974 + 15822228 JX312692 AFQ55781;YP_008080749 REVIEWED 8750379 protein-coding Chd8 chromodomain helicase DNA binding protein 8 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); ATP binding (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN brain development (ortholog); chromatin remodeling (ortholog); digestive tract development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955550 2115649 2175687 - 102010636 AGCD01072611;GBDK01006485;XM_005412107;XM_005412108;XM_005412109;XM_005412110;XM_005412111;XM_005412112;XM_005412113;XM_005412115 XP_005412164;XP_005412165;XP_005412166;XP_005412167;XP_005412168;XP_005412169;XP_005412170;XP_005412172 MODEL 8749875 protein-coding Gfap glial fibrillary acidic protein ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); kinase binding (ortholog); INVOLVED IN astrocyte development (ortholog); Bergmann glial cell differentiation (ortholog); D-aspartate import across plasma membrane (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alexander disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN astrocyte end-foot (ortholog); astrocyte projection (ortholog); cell body (ortholog) NW_004955451 17695835 17703894 - 102021410 AGCD01043767;GBDF01289667;XM_005394555;XM_005394556 XP_005394612;XP_005394613 MODEL 8858932 protein-coding Sf3b6 splicing factor 3b subunit 6 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U12-type spliceosomal complex (ortholog) NW_004955469 6275894 6286908 - 102024444 AGCD01052376;AGCD01052377;GBCE01001807;XM_005400375 XP_005400432 MODEL 39133243 snrna U4 U4 spliceosomal RNA 8735588 trna trnA(tgc) tRNA-Ala MT 5014 5083 - 15822221 8818527 ncrna LOC102006036 uncharacterized LOC102006036 NW_004955421 23412284 23447843 + 102006036 AGCD01022183;GBCQ01089850;XR_001233831;XR_260822 MODEL 39132487 rrna 5S_rRNA 5S ribosomal RNA 39134383 misc_rna 7SK 7SK RNA 8806556 protein-coding LOC102010861 chromosome unknown open reading frame, human C1orf94 INVOLVED IN intracellular protein localization (ortholog); mRNA destabilization (ortholog); single fertilization (ortholog) NW_004955452 12288967 12325948 + 102010861 AGCD01044350;GBDF01048888;XM_005395119;XM_005395120;XM_005395121 XP_005395176;XP_005395177;XP_005395178 MODEL 10354872 ncrna LOC106147132 uncharacterized LOC106147132 NW_004955521 2576473 2601324 + 106147132 AGCD01068209;AGCD01068210;GBBH01083125;XR_001231889 MODEL 8769837 pseudo LOC102018117 GTPase RhebL1 pseudogene NW_004955428 18782844 18783372 + 102018117 AGCD01028071 MODEL 8747629 protein-coding Aptx aprataxin ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); DNA 5'-adenosine monophosphate hydrolase activity (ortholog); INVOLVED IN regulation of protein stability (ortholog); single strand break repair (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH coenzyme Q10 deficiency disease (ortholog); early-onset ataxia with oculomotor apraxia and hypoalbuminemia (ortholog); epilepsy (ortholog); FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955472 2645716 2664394 + 102012530 AGCD01053481;AGCD01053482;GBDF01083780;XM_005401112;XM_005401113;XM_013523036;XM_013523037 XP_005401169;XP_005401170;XP_013378490;XP_013378491 MODEL 8740092 protein-coding Ebf4 EBF family member 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); T cell apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN chromatin (ortholog) NW_004955415 13673700 13734344 + 102017230 AGCD01016264;AGCD01016265;GBDI01078714;XM_005380760;XM_013512386;XM_013512387;XR_001233261;XR_001233262 XP_005380817;XP_013367840;XP_013367841 MODEL 8818266 protein-coding Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 INVOLVED IN bone mineralization (ortholog); bone remodeling (ortholog); brain development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); intellectual disability (ortholog) NW_004955450 11525245 11719992 + 102024179 AGCD01042665;AGCD01042666;AGCD01042667;AGCD01042668;AGCD01042669;AGCD01042670;AGCD01042671;GBDF01052862;XM_005393785;XM_005393787;XM_013518839;XM_013518840;XM_013518841;XM_013518842 XP_005393842;XP_005393844;XP_013374293;XP_013374294;XP_013374295;XP_013374296 MODEL 39131880 snrna U1 U1 spliceosomal RNA 8786214 protein-coding Plekhg5 pleckstrin homology and RhoGEF domain containing G5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endothelial cell chemotaxis (ortholog); endothelial cell migration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); autosomal recessive distal hereditary motor neuronopathy 4 (ortholog); Charcot-Marie-Tooth disease recessive intermediate C (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) NW_004955486 6099654 6121805 + 102010165 AGCD01059108;GBBH01085966;XM_005404088;XM_013504284;XM_013504285;XM_013504286;XM_013504288 XP_005404145;XP_013359738;XP_013359739;XP_013359740;XP_013359742 MODEL 8892476 protein-coding LOC102021499 zinc finger protein 39-like NW_004955581 3067 74785 - 102021499 AGCD01075654;AGCD01075655;AGCD01075656;GBDI01011076;XM_013509735 XP_013365189 MODEL 8764499 protein-coding Aspscr1 ASPSCR1 tether for SLC2A4, UBX domain containing INVOLVED IN glucose homeostasis (ortholog); intracellular protein transport (ortholog); positive regulation of protein modification process (ortholog); ASSOCIATED WITH alveolar soft part sarcoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955506 1152790 1193826 - 102019825 AGCD01065247;GBDF01286847;XM_005407230;XM_005407231;XM_013506048 XP_005407287;XP_005407288;XP_013361502 MODEL 8951529 protein-coding Alkbh7 alkB homolog 7, RNA demethylase ENCODES a protein that exhibits oxidative RNA demethylase activity (ortholog); tRNA demethylase activity (ortholog); INVOLVED IN DNA damage response (ortholog); fatty acid metabolic process (ortholog); oxidative RNA demethylation (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955495 3220994 3222675 - 102015024 AGCD01061838;GBCQ01005961;XM_005405724 XP_005405781 MODEL 9021443 protein-coding LOC102019709 uncharacterized LOC102019709 NW_004955422 29357621 29359088 - 102019709 AGCD01023392;GBBH01220834;XM_005384906;XM_013513878;XM_013513879 XP_005384963;XP_013369332;XP_013369333 MODEL 8798004 protein-coding Pth2r parathyroid hormone 2 receptor ENCODES a protein that exhibits parathyroid hormone receptor activity (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH syndromic intellectual disability (ortholog) NW_004955457 6584627 6674990 - 102025875 AGCD01046846;AGCD01046847;AGCD01046848;AGCD01046849;AGCD01046850;XM_005397112 XP_005397169 MODEL 39133244 snrna U4 U4 spliceosomal RNA 8704094 protein-coding Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 INVOLVED IN genitalia development (ortholog); regulation of cardiolipin metabolic process (ortholog); visual perception (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); 3-methylglutaconic aciduria type 3 (ortholog); 3-methylglutaconic aciduria type 5 (ortholog); FOUND IN inner mitochondrial membrane protein complex (ortholog); matrix side of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955420 9974466 9978789 - 102020673 AGCD01020772;GBDI01061774;XM_005383071;XM_005383072 XP_005383128;XP_005383129 MODEL 8812177 pseudo LOC102017366 olfactory receptor 5T2-like NW_004955511 1302880 1303815 + 102017366 AGCD01066362 MODEL 9061651 protein-coding Tpst2 tyrosylprotein sulfotransferase 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-tyrosine sulfotransferase activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); peptidyl-tyrosine sulfation (ortholog); prevention of polyspermy (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi lumen (ortholog); trans-Golgi network (ortholog) NW_004955455 1106403 1128455 - 102016778 AGCD01045568;GBBH01026338;XM_013520467;XM_013520468 XP_013375921;XP_013375922 MODEL 9034077 protein-coding Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif 6 INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog) NW_004955446 3620795 3902829 + 102021401 AGCD01040022;AGCD01040023;AGCD01040024;AGCD01040025;AGCD01040026;AGCD01040027;AGCD01040028;AGCD01040029;AGCD01040030;GBDF01114388;XM_005392632;XM_013518467 XP_005392689;XP_013373921 MODEL 8906627 pseudo LOC102022495 leucine-rich repeat-containing protein 58 pseudogene NW_004955475 2731063 2732539 - 102022495 AGCD01054818 MODEL 39133801 misc_rna 7SK 7SK RNA 8738533 protein-coding Blvrb biliverdin reductase B ENCODES a protein that exhibits biliverdin reductase [NAD(P)H] activity (ortholog); peptidyl-cysteine S-nitrosylase activity (ortholog); riboflavin reductase (NADPH) activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone marrow development (ortholog); cell fate specification (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); esophagus squamous cell carcinoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN terminal bouton; cytoplasm (ortholog); cytosol (ortholog) NW_004955578 813834 834675 + 102012040 AGCD01075498;GBCE01001251;XM_005414044 XP_005414101 MODEL 9024369 protein-coding Timm10b translocase of inner mitochondrial membrane 10B PARTICIPATES IN carrier pathway of mitochondrial protein import; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) NW_004955414 22214457 22217351 + 102023142 AGCD01015449;GBDK01146994;XM_005380148 XP_005380205 MODEL 8946639 protein-coding Catsperz catsper channel auxiliary subunit zeta INVOLVED IN flagellated sperm motility (ortholog); male meiotic nuclear division (ortholog); sperm capacitation (ortholog); FOUND IN CatSper complex (ortholog); cytoplasm (ortholog); sperm midpiece (ortholog) NW_004955422 20777488 20780765 - 102021989 AGCD01023087;GBDI01145184;XM_013514234 XP_013369688 MODEL 39131726 rrna 5S_rRNA 5S ribosomal RNA 8908462 protein-coding Pdpn podoplanin ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); chemokine binding (ortholog); folic acid transmembrane transporter activity (ortholog); INVOLVED IN actin-mediated cell contraction (ortholog); amino acid transport (ortholog); cell adhesion (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Albuminuria (ortholog); bacterial pneumonia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) NW_004955527 4183639 4215200 - 102018128 AGCD01069499;AGCD01069500;GBCE01052774;XM_005409891 XP_005409948 MODEL 8914959 ncrna LOC102015100 uncharacterized LOC102015100 NW_004955471 2514798 2534812 - 102015100 AGCD01053016;AGCD01053017;AGCD01053018;AGCD01053019;GBCE01170669;XR_263515 MODEL 8720440 protein-coding LOC102012491 kinesin-like protein KIF13B NW_004955802 3103 18233 - 102012491 AGCD01078376;GBDK01191507;GBDK01191509;XM_005415115 XP_005415172 MODEL 8875475 protein-coding Wdr5b WD repeat domain 5B FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955427 21698766 21700390 - 102010390 AGCD01027454;GBCE01034152;XM_005386511 XP_005386568 MODEL 8839780 protein-coding Agfg1 ArfGAP with FG repeats 1 INVOLVED IN acrosome assembly (ortholog); intermediate filament organization (ortholog); spermatid nucleus differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); oligoasthenoteratozoospermia (ortholog); FOUND IN cytoplasmic vesicle (ortholog); neuronal cell body (ortholog) NW_004955453 7066509 7127878 - 102009011 AGCD01044736;AGCD01044737;GBCQ01094513;GBDF01002248;XM_013519948 XP_013375402 MODEL 8982356 protein-coding Rfxank regulatory factor X associated ankyrin containing protein ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH genetic disease (ortholog); MHC class II deficiency (ortholog); MHC CLASS II DEFICIENCY 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955524 2635358 2642206 - 102009536 AGCD01068827;GBDK01070389;XM_005409620;XM_005409621;XM_013507211;XM_013507212;XM_013507214 XP_005409677;XP_005409678;XP_013362665;XP_013362666;XP_013362668 MODEL 8783522 protein-coding Baz1a bromodomain adjacent to zinc finger domain 1A INVOLVED IN chromatin remodeling (ortholog); DNA-templated DNA replication (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH X-linked VACTERL association (ortholog); FOUND IN CHRAC (ortholog); nuclear chromosome (ortholog); nucleus (ortholog) NW_004955409 26136961 26231960 + 102010779 AGCD01010158;AGCD01010159;AGCD01010160;AGCD01010161;AGCD01010162;AGCD01010163;AGCD01010164;GBBH01102027;GBDI01259061;XM_013510376 XP_013365830 MODEL 8906913 ncrna LOC102005289 uncharacterized LOC102005289 NW_004955514 2421476 2423697 + 102005289 AGCD01067079;GBDF01075509;XR_264495 MODEL 9058682 protein-coding Fan1 FANCD2 and FANCI associated nuclease 1 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-flap endonuclease activity (ortholog); flap-structured DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 29722280 29757960 + 102016158 AGCD01017665;AGCD01017666;AGCD01017667;GBBH01165026;GBDF01193662;XM_005381663 XP_005381720 MODEL 8964005 pseudo LOC102007082 plastin-3 pseudogene NW_004955452 11705919 11707877 + 102007082 AGCD01044343 MODEL 8864656 protein-coding Ttll7 tubulin tyrosine ligase like 7 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN protein polyglutamylation (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog) NW_004955423 9819049 9956744 + 102006680 AGCD01023668;GBBH01205865;GBDF01002743;XM_005385172;XM_013514540 XP_005385229;XP_013369994 MODEL 8852310 pseudo LOC102003562 olfactory receptor 140-like NW_004955422 257720 265363 - 102003562 AGCD01022401 MODEL 8813991 protein-coding Fkbp7 FKBP prolyl isomerase 7 ENCODES a protein that exhibits calcium ion binding (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955403 18373372 18385172 + 102026699 AGCD01002098;GBDF01188414;XM_005373377;XM_005373378 XP_005373434;XP_005373435 MODEL 8772045 protein-coding Tsc22d4 TSC22 domain family member 4 INVOLVED IN glucose homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron cellular homeostasis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); nucleus (ortholog) NW_004955573 414984 425480 + 102023089 AGCD01074976;AGCD01074977;GBDK01081440;XM_005413727;XM_013509480 XP_005413784;XP_013364934 MODEL 39134384 misc_rna 7SK 7SK RNA 39133246 snrna U4 U4 spliceosomal RNA 8970209 pseudo LOC102010080 protein MEMO1-like NW_004955429 4415409 4416220 + 102010080 AGCD01028489 MODEL 8960827 protein-coding LOC102019995 nuclear transport factor 2 NW_004955413 9732710 9733561 - 102019995 AGCD01013910;XM_005378974 XP_005379031 MODEL 39132375 snrna U6 U6 spliceosomal RNA 9015054 protein-coding Irf2 interferon regulatory factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of type I interferon production (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell junction (ortholog); chromatin (ortholog); cytosol (ortholog) NW_004955403 24433334 24517618 + 102005874 AGCD01002273;AGCD01002274;GBDI01079451;XM_005373488;XM_005373489;XM_005373492;XM_005373493;XM_005373494 XP_005373545;XP_005373546;XP_005373549;XP_005373550;XP_005373551 MODEL 8908628 protein-coding Aqp1 aquaporin 1 (Colton blood group) ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); camera-type eye morphogenesis (ortholog); carbon dioxide transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Aquaporin 1 Deficiency (ortholog); FOUND IN ankyrin-1 complex (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955410 32066196 32078661 + 102023237 AGCD01011335;GBCQ01010363;XM_005377508 XP_005377565 MODEL 8858931 pseudo LOC102024180 protein DBF4 homolog A pseudogene NW_004955612 134262 137323 + 102024180 AGCD01077180 MODEL 9045202 protein-coding Hnrnpm heterogeneous nuclear ribonucleoprotein M ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein antigen binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to carcinoembryonic antigen (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH colorectal carcinoma (ortholog); leiomyoma (ortholog); long QT syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cell surface (ortholog); glutamatergic synapse (ortholog) NW_004955563 933824 975064 - 102012034 AGCD01074097;AGCD01074098;AGCD01074099;GBCE01000963;XM_005413119;XM_005413121;XM_005413122;XM_005413123;XM_005413124;XM_005413125;XM_013509137 XP_005413176;XP_005413178;XP_005413179;XP_005413180;XP_005413181;XP_005413182;XP_013364591 MODEL 8820256 protein-coding Atp8a1 ATPase phospholipid transporting 8A1 ENCODES a protein that exhibits phosphatidylserine flippase activity (ortholog); INVOLVED IN aminophospholipid translocation (ortholog); learning (ortholog); positive regulation of cell migration (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog) NW_004955443 5142049 5362031 + 102007946 AGCD01038232;AGCD01038233;AGCD01038234;AGCD01038235;AGCD01038236;GBCE01062282;XM_005391917;XM_005391918;XM_005391919;XM_005391920 XP_005391974;XP_005391975;XP_005391976;XP_005391977 MODEL 8947432 protein-coding Gfer growth factor, augmenter of liver regeneration ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to actinomycin D (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to toxic substance (ortholog); PARTICIPATES IN intermembrane space assembly pathway of mitochondrial protein import; mitochondrial iron-sulfur cluster export pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); mitochondrion (ortholog) NW_004955442 15280753 15283405 - 102010739 AGCD01037864;GBDI01129394;XM_005391484;XM_005391485 XP_005391541;XP_005391542 MODEL 8974542 trna Trnaa-agc transfer RNA alanine (anticodon AGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978814 AGCD01022921;AGCD01037757;AGCD01039088;AGCD01050627;AGCD01050631;AGCD01052488;AGCD01057602;AGCD01057606;AGCD01058153 MODEL 8803593 protein-coding Plekhg6 pleckstrin homology and RhoGEF domain containing G6 ASSOCIATED WITH cystic fibrosis (ortholog); FOUND IN cell junction (ortholog) NW_004955413 3969459 3982348 + 102012179 AGCD01013590;AGCD01013591;GBBH01193665;XM_005378757 XP_005378814 MODEL 8798465 protein-coding Sfi1 SFI1 centrin binding protein ENCODES a protein that exhibits phosphatase binding (ortholog); FOUND IN centriole (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955455 5667105 5744878 + 102012729 AGCD01045746;AGCD01045747;AGCD01045748;AGCD01045749;AGCD01045750;AGCD01045751;GBDK01319767;XM_005396332;XM_013520407;XM_013520408;XM_013520409;XM_013520410;XM_013520412;XM_013520413;XM_013520414;XM_013520415;XM_013520416;XM_013520417 XP_005396389;XP_013375861;XP_013375862;XP_013375863;XP_013375864;XP_013375866;XP_013375867;XP_013375868;XP_013375869;XP_013375870;XP_013375871 MODEL 8926576 protein-coding LOC102006039 uncharacterized LOC102006039 NW_004955491 8353014 8354199 + 102006039 AGCD01060614;GBCB01010474;XM_013504570 XP_013360024 MODEL 8850125 protein-coding LOC102019713 olfactory receptor 24 NW_004955495 157242 158152 + 102019713 AGCD01061604;AGCD01061605;XM_013505041 XP_013360495 MODEL 10316787 ncrna LOC106150105 uncharacterized LOC106150105 NW_004955465 11835697 11841804 + 106150105 AGCD01050536;GBDJ01200174;XR_001236722 MODEL 39134073 misc_rna 7SK 7SK RNA 8865598 protein-coding Gphb5 glycoprotein hormone subunit beta 5 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); thyrotropin-releasing hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); regulation of thyroid hormone receptor signaling pathway (ortholog) NW_004955466 6461641 6466777 + 102009481 AGCD01050928;GBDF01015378;XM_005399157;XR_001236814 XP_005399214 MODEL 39133802 misc_rna 7SK 7SK RNA 8724212 protein-coding Chd9 chromodomain helicase DNA binding protein 9 INVOLVED IN chromatin organization (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955433 10900771 11161161 + 102024041 AGCD01031639;AGCD01031640;AGCD01031641;AGCD01031642;AGCD01031643;AGCD01031644;AGCD01031645;AGCD01031646;AGCD01031647;AGCD01031648;AGCD01031649;GBCE01009599;XM_005388286;XM_005388287;XM_005388293;XM_005388294;XM_013516196;XM_013516197;XM_013516198;XM_013516199;XM_013516200;XM_013516201 XP_005388343;XP_005388344;XP_005388350;XP_005388351;XP_013371650;XP_013371651;XP_013371652;XP_013371653;XP_013371654;XP_013371655 MODEL 8876276 protein-coding Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN cellular response to BMP stimulus (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Coronary Disease (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) NW_004955450 525313 581006 + 102006186 AGCD01042339;GBCE01142109;XM_005393436;XM_013518885;XM_013518886;XM_013518887;XM_013518888;XM_013518890 XP_005393493;XP_013374339;XP_013374340;XP_013374341;XP_013374342;XP_013374344 MODEL 8822821 ncrna LOC102021500 uncharacterized LOC102021500 NW_004955449 3631986 3636241 + 102021500 AGCD01041858;GBDF01211884;XR_262486 MODEL 9046719 protein-coding Cav1 caveolin 1 ENCODES a protein that exhibits ATPase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiotensin-activated signaling pathway (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN insulin signaling pathway; platelet-derived growth factor signaling pathway; reverse cholesterol transport pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acoustic neuroma (ortholog); Acute Lung Injury (ortholog); FOUND IN acrosomal membrane (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955432 22258262 22292403 + 102011898 AGCD01031252;AGCD01031253;GBDI01017658;GBDK01011537;XM_005388120 XP_005388177 MODEL 8945937 protein-coding Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits SUMO binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of Notch signaling pathway (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 38 (ortholog); Developmental Disabilities (ortholog); exotropia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955533 1304675 1489041 + 102022538 AGCD01070356;AGCD01070357;AGCD01070358;AGCD01070359;AGCD01070360;AGCD01070361;GBCE01117742;XM_005410402;XM_013507678;XM_013507679;XM_013507680;XM_013507681;XM_013507682 XP_005410459;XP_013363132;XP_013363133;XP_013363134;XP_013363135;XP_013363136 MODEL 8832769 protein-coding Alkbh8 alkB homolog 8, tRNA methyltransferase ENCODES a protein that exhibits iron ion binding (ortholog); tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity (ortholog); tRNA (uridine) methyltransferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); tRNA methylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 71 (ortholog); Breast Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955412 9875905 9923728 - 102030164 AGCD01012749;AGCD01012750;GBDK01061326;XM_005378030;XM_013511121;XM_013511122 XP_005378087;XP_013366575;XP_013366576 MODEL 39132489 rrna 5S_rRNA 5S ribosomal RNA 8824205 protein-coding Ass1 argininosuccinate synthase 1 ENCODES a protein that exhibits amino acid binding (ortholog); argininosuccinate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acute-phase response (ortholog); argininosuccinate metabolic process (ortholog); aspartate metabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-Phase Reaction (ortholog); adult-onset type II citrullinemia (ortholog); FOUND IN cell body fiber (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955513 443372 485190 + 102015877 AGCD01066826;GBCQ01008334;XM_005408343 XP_005408400 MODEL 8788001 protein-coding Pthlh parathyroid hormone like hormone ENCODES a protein that exhibits hormone activity (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); endochondral ossification (ortholog); endoderm development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH achondroplasia (ortholog); acute necrotizing pancreatitis (ortholog); alcoholic pancreatitis (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); nucleoplasm (ortholog) NW_004955505 6834533 6846909 + 102018623 AGCD01065187;GBBH01206343;GBDK01026033;XM_005407152 XP_005407209 MODEL 8885614 pseudo LOC102010862 E3 ubiquitin-protein ligase TRIM23 pseudogene NW_004955405 30595460 30597274 + 102010862 AGCD01005276 MODEL 10106591 ncrna LOC106147133 uncharacterized LOC106147133 NW_004955521 4272009 4282495 - 106147133 AGCD01068259;XR_001231890 MODEL 8717155 pseudo LOC102007084 signal transducer CD24 pseudogene NW_004955406 23812162 23812599 - 102007084 AGCD01006185 MODEL 8725641 pseudo LOC102018118 protein S100-A10 pseudogene NW_004955507 5694303 5694594 + 102018118 AGCD01065684 MODEL 8868888 protein-coding Baz1b bromodomain adjacent to zinc finger domain 1B ENCODES a protein that exhibits histone binding (ortholog); histone H2AXY142 kinase activity (ortholog); INVOLVED IN chromatin organization (ortholog); chromatin remodeling (ortholog); DNA damage response (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH Williams-Beuren syndrome (ortholog); FOUND IN condensed chromosome (ortholog); nuclear replication fork (ortholog); nucleoplasm (ortholog) NW_004955456 14185091 14242391 + 102013587 AGCD01046636;AGCD01046637;GBDF01045151;GBDJ01091843;XM_013520577 XP_013376031 MODEL 8954574 protein-coding Fanca FA complementation group A INVOLVED IN female gonad development (ortholog); male gonad development (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) NW_004955541 3272936 3320229 - 102016519 AGCD01071441;GBDJ01214635;XM_005411060;XM_005411062;XM_013507950;XM_013507951;XM_013507952;XM_013507953;XM_013507954;XR_001232134;XR_001232135 XP_005411117;XP_005411119;XP_013363404;XP_013363405;XP_013363406;XP_013363407;XP_013363408 MODEL 9061569 protein-coding Kif9 kinesin family member 9 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); organelle disassembly (ortholog); regulation of flagellated sperm motility (ortholog); FOUND IN axonemal microtubule (ortholog); microtubule (ortholog); podosome (ortholog) NW_004955420 24968757 25011642 + 102015017 AGCD01021339;AGCD01021340;AGCD01021341;GBDF01049531;XM_005383403;XM_005383404;XM_005383405;XM_005383407;XM_005383408;XM_013513486;XM_013513487;XM_013513488 XP_005383460;XP_005383461;XP_005383462;XP_005383464;XP_005383465;XP_013368940;XP_013368941;XP_013368942 MODEL 8934727 protein-coding Tpx2 TPX2 microtubule nucleation factor ENCODES a protein that exhibits importin-alpha family protein binding (ortholog); molecular adaptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); microtubule nucleation (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon hillock (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) NW_004955422 29170695 29233924 - 102014064 AGCD01023379;AGCD01023380;AGCD01023381;AGCD01023382;AGCD01023383;GBBH01149736;XM_005384887;XM_005384888;XM_005384889;XM_005384890;XM_005384891;XM_005384892;XM_013514186;XM_013514187;XM_013514188;XM_013514190 XP_005384944;XP_005384945;XP_005384946;XP_005384947;XP_005384948;XP_005384949;XP_013369640;XP_013369641;XP_013369642;XP_013369644 MODEL 8758162 protein-coding Ebi3 Epstein-Barr virus induced 3 ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-27 receptor binding (ortholog); INVOLVED IN regulation of T cell proliferation (ortholog); T cell proliferation (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); pre-eclampsia (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 4609841 4615686 - 102011676 AGCD01061936;GBBH01211598;XM_005405807 XP_005405864 MODEL 8904754 pseudo LOC102022501 olfactory receptor 1361-like NW_004955419 5358140 5359599 - 102022501 AGCD01019802 MODEL 39133249 snrna U4 U4 spliceosomal RNA 39132377 snrna U6 U6 spliceosomal RNA 8789620 protein-coding Tsen15 tRNA splicing endonuclease subunit 15 INVOLVED IN tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); pontocerebellar hypoplasia type 2F (ortholog) NW_004955406 22787090 22806231 + 102029824 AGCD01006161;GBDK01323609;XM_005375050 XP_005375107 MODEL 39131728 rrna 5S_rRNA 5S ribosomal RNA 8955262 protein-coding Timm13 translocase of inner mitochondrial membrane 13 INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space chaperone complex (ortholog); mitochondrion (ortholog) NW_004955495 5781024 5782300 + 102013516 AGCD01062029;GBDF01047197;XM_005405902 XP_005405959 MODEL 8812794 protein-coding Blzf1 basic leucine zipper nuclear factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); nucleoplasm (ortholog) NW_004955462 7856650 7879659 - 102015699 AGCD01049309;GBDI01293361;XM_005398201;XM_005398202;XM_013521407;XM_013521408;XM_013521409 XP_005398258;XP_005398259;XP_013376861;XP_013376862;XP_013376863 MODEL 9029494 ncrna LOC102015103 uncharacterized LOC102015103 NW_004955415 4079080 4088160 + 102015103 AGCD01015964;GBDI01327867;XR_260263;XR_260264 MODEL 8901625 protein-coding Pdpr pyruvate dehydrogenase phosphatase regulatory subunit INVOLVED IN positive regulation of pyruvate decarboxylation to acetyl-CoA (ortholog); ASSOCIATED WITH Joubert syndrome (ortholog); FOUND IN mitochondrion (ortholog) NW_004955484 3007435 3044060 - 102027190 AGCD01058149;AGCD01058150;GBCQ01177188;GBDJ01186948;XM_005403465 XP_005403522 MODEL 8982458 pseudo LOC102012495 quinone oxidoreductase pseudogene NW_004955405 19872 21878 + 102012495 AGCD01004551 MODEL 8927373 protein-coding Aqp10 aquaporin 10 ENCODES a protein that exhibits glycerol channel activity (ortholog); water channel activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); protein homotetramerization (ortholog); response to toxic substance (ortholog); PARTICIPATES IN water transport pathway; FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955545 845749 848738 + 102011591 AGCD01071820;XM_005411519 XP_005411576 MODEL 8910603 ncrna LOC102017374 uncharacterized LOC102017374 NW_004955433 14373966 14376275 - 102017374 AGCD01031721;GBCQ01013503;XR_261595 MODEL 8837990 protein-coding LOC102005291 transcription initiation factor TFIID subunit 4-like NW_004955432 22101100 22117718 + 102005291 AGCD01031246;AGCD01031247;XM_013515921 XP_013371375 MODEL 8746407 protein-coding Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of cell growth (ortholog); negative regulation of DNA biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955410 8317640 8338407 - 102015933 AGCD01010744;GBDF01089388;XM_005377226 XP_005377283 MODEL 9015758 protein-coding Rfxap regulatory factor X associated protein ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH MHC class II deficiency (ortholog); MHC CLASS II DEFICIENCY 1 (ortholog); MHC CLASS II DEFICIENCY 4 (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955431 9200006 9209588 - 102014933 AGCD01030160;AGCD01030161;GBCB01034736;GBDJ01029212;XM_013515899 XP_013371353 MODEL 8799274 protein-coding Ttll8 tubulin tyrosine ligase like 8 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, initiating (ortholog); INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); protein polyglycylation (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) NW_004955413 33086528 33119801 - 102018912 AGCD01014656;GBDF01081579;XM_013511673 XP_013367127 MODEL 8722973 protein-coding Plekhg7 pleckstrin homology and RhoGEF domain containing G7 NW_004955405 29703523 29760551 + 102022562 AGCD01005256;GBDJ01353997;XM_005374457;XM_005374459;XM_005374460;XM_013518255;XM_013518257;XM_013518258;XM_013518264;XM_013518269;XM_013518275 XP_005374514;XP_005374516;XP_005374517;XP_013373709;XP_013373711;XP_013373712;XP_013373718;XP_013373723;XP_013373729 MODEL 9046188 ncrna LOC102019997 uncharacterized LOC102019997 NW_004955413 27072521 27074834 + 102019997 AGCD01014491;GBDF01001457;XR_001232950 MODEL 39131885 snrna U1 U1 spliceosomal RNA 8858827 protein-coding LOC102018121 vomeronasal type-1 receptor 90-like NW_004955429 12382792 12383739 + 102018121 AGCD01028715;XM_005387248 XP_005387305 MODEL 8967823 protein-coding Sfmbt1 Scm like with four mbt domains 1 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of muscle organ development (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 2850149 3014859 - 102027772 AGCD01029182;AGCD01029183;AGCD01029184;AGCD01029185;AGCD01029186;AGCD01029187;GBBH01041099;GBDF01043456;XM_013515695;XM_013515696 XP_013371149;XP_013371150 MODEL 8891771 protein-coding Irf2bp1 interferon regulatory factor 2 binding protein 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); protein polyubiquitination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955574 309506 311759 - 102023208 AGCD01075098;GBCE01097248;XM_005413820 XP_005413877 MODEL 39134074 misc_rna 7SK 7SK RNA 10103940 protein-coding LOC106150106 uncharacterized LOC106150106 NW_004955465 8504188 8511042 + 106150106 AGCD01050476;GBDJ01211892;XM_013521769;XM_013521770 XP_013377223;XP_013377224 MODEL 39133803 misc_rna 7SK 7SK RNA 8800487 protein-coding Wdr6 WD repeat domain 6 ENCODES a protein that exhibits enzyme regulator activity (ortholog); enzyme-substrate adaptor activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); negative regulation of autophagy (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955532 1029857 1039020 + 102008347 AGCD01070161;AGCD01070162;GBCB01099321;XM_005410186;XM_013507579 XP_005410243;XP_013363033 MODEL 39133251 snrna U4 U4 spliceosomal RNA 8940451 protein-coding Agfg2 ArfGAP with FG repeats 2 NW_004955573 337610 364845 - 102021813 AGCD01074975;AGCD01074976;GBCQ01002988;XM_005413722;XM_005413723;XM_005413724;XM_013509478;XM_013509479 XP_005413779;XP_005413780;XP_005413781;XP_013364932;XP_013364933 MODEL 8874235 trna Trnaa-cgc transfer RNA alanine (anticodon CGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955419;NW_004955449 326792;20242611;16876672 326863;20242682;16876743 -;-;- 101978817 AGCD01020232;AGCD01042230;AGCD01057606 MODEL 8956762 protein-coding Gphn gephyrin ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); molybdopterin adenylyltransferase activity (ortholog); INVOLVED IN establishment of protein localization (ortholog); establishment of synaptic specificity at neuromuscular junction (ortholog); gamma-aminobutyric acid receptor clustering (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955466 3017474 3526375 - 102018907 AGCD01050780;AGCD01050781;AGCD01050782;AGCD01050783;AGCD01050784;AGCD01050785;AGCD01050786;AGCD01050787;AGCD01050788;AGCD01050789;AGCD01050790;AGCD01050791;AGCD01050792;AGCD01050793;AGCD01050794;AGCD01050795;GBCQ01098398;XM_005399095;XM_005399096;XM_005399098;XM_005399099;XM_005399100;XM_013521942;XM_013521943;XM_013521944;XM_013521945;XM_013521947 XP_005399152;XP_005399153;XP_005399155;XP_005399156;XP_005399157;XP_013377396;XP_013377397;XP_013377398;XP_013377399;XP_013377401 MODEL 8902760 pseudo LOC102003569 40S ribosomal protein S20 pseudogene NW_004955429 19247140 19249410 + 102003569 AGCD01028938 MODEL 8958372 protein-coding Chdh choline dehydrogenase ENCODES a protein that exhibits choline dehydrogenase activity (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH congestive heart failure (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955430 3797924 3831326 - 102003678 AGCD01029223;AGCD01029224;AGCD01029225;AGCD01029226;AGCD01029227;GBBH01089524;GBDJ01406665;XM_013515612 XP_013371066 MODEL 39134385 misc_rna 7SK 7SK RNA 8749082 protein-coding Allc allantoicase ENCODES a protein that exhibits allantoicase activity (ortholog); INVOLVED IN response to calcium ion (ortholog); response to magnesium ion (ortholog); response to pH (ortholog) NW_004955487 3757362 3774067 - 102016601 AGCD01059293;GBDF01007362;XM_005404369;XM_005404370 XP_005404426;XP_005404427 MODEL 8920872 ncrna LOC102012499 uncharacterized LOC102012499 NW_004955407 30651094 30671049 - 102012499 AGCD01007639;GBDJ01066236;XR_001231688;XR_259595 MODEL 8815701 ncrna LOC102010866 uncharacterized LOC102010866 NW_004955454 15132762 15145904 + 102010866 AGCD01045485;AGCD01045486;GBDF01016961;XR_001236261;XR_001236262 MODEL 9028787 protein-coding LOC102010081 vomeronasal secretory protein 2-like NW_004955513 2601129 2609926 + 102010081 AGCD01066882;AGCD01066883;GBDF01023674;XM_005408421;XM_005408422;XM_013506591 XP_005408478;XP_005408479;XP_013362045 MODEL 8959207 protein-coding LOC102007088 uncharacterized LOC102007088 NW_004955459 3561454 3572591 - 102007088 AGCD01048015;GBDF01086912;XM_013521036 XP_013376490 MODEL 8791480 protein-coding Kifbp kinesin family binding protein ENCODES a protein that exhibits kinesin binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mitochondrion transport along microtubule (ortholog); transport along microtubule (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 3 (ortholog); complex cortical dysplasia with other brain malformations (ortholog); Goldberg-Shprintzen syndrome (ortholog) NW_004955437 22015112 22040439 - 102026908 AGCD01034926;GBDF01118171;XM_005390099 XP_005390156 MODEL 39131512 protein-coding EBI3 Epstein-Barr virus induced 3 8704578 protein-coding Fancb FA complementation group B INVOLVED IN bone marrow development (ortholog); cellular response to camptothecin (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH breast cancer (ortholog); Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955519 3337138 3364963 + 102020044 AGCD01067957;AGCD01067958;AGCD01067959;GBDF01033497;XM_013506977 XP_013362431 MODEL 8859347 protein-coding Baz2a bromodomain adjacent to zinc finger domain 2A ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN chromatin silencing complex (ortholog); NoRC complex (ortholog); nuclear speck (ortholog) NW_004955458 4149610 4186647 - 102011959 AGCD01047379;AGCD01047380;AGCD01047381;GBCE01024577;XM_005397321;XM_005397322;XM_005397324;XM_013520867;XM_013520868 XP_005397378;XP_005397379;XP_005397381;XP_013376321;XP_013376322 MODEL 9006316 protein-coding Hnrnpr heterogeneous nuclear ribonucleoprotein R ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN circadian rhythm (ortholog); mRNA destabilization (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND SKELETAL AND BRAIN ABNORMALITIES (ortholog); FOUND IN axon terminus (ortholog); catalytic step 2 spliceosome (ortholog); dendrite (ortholog) NW_004955452 3318536 3354725 - 102013243 AGCD01043918;AGCD01043919;AGCD01043920;AGCD01043921;GBDK01089541;XM_005394754;XM_005394759;XM_013519517;XM_013519518 XP_005394811;XP_005394816;XP_013374971;XP_013374972 MODEL 8841639 pseudo LOC102021503 synaptobrevin homolog YKT6 pseudogene NW_004955402 16757606 16758112 - 102021503 AGCD01000488 MODEL 8834028 protein-coding Gfi1 growth factor independent 1 transcriptional repressor ENCODES a protein that exhibits DNA-binding transcription repressor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN cell fate commitment (ortholog); cellular response to lipopolysaccharide (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); leukemia (ortholog); FOUND IN nuclear body (ortholog); nuclear matrix (ortholog); nucleus (ortholog) NW_004955423 2024084 2032530 + 102020580 AGCD01023463;AGCD01023464;GBDJ01320845;XM_013514361 XP_013369815 MODEL 8908401 protein-coding LOC102015105 zinc finger protein 709-like NW_004955415 31585334 31630325 + 102015105 AGCD01016684;AGCD01016685;AGCD01016686;AGCD01016687;AGCD01016688;AGCD01016689;AGCD01016690;AGCD01016691;GBDI01052670;XM_005381004;XM_005381005;XM_013512376 XP_005381061;XP_005381062;XP_013367830 MODEL 9047257 protein-coding Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif 8 ASSOCIATED WITH Moebius syndrome (ortholog); Prostatic Neoplasms (ortholog) NW_004955412 31295436 31336781 - 102005788 AGCD01013334;AGCD01013335;AGCD01013336;GBBH01073135;GBDJ01220127;XM_013510983 XP_013366437 MODEL 8738868 protein-coding LOC102006044 uncharacterized LOC102006044 NW_004955423 26874436 26882443 - 102006044 AGCD01024108;GBDJ01373506;XM_013514385 XP_013369839 MODEL 9062464 ncrna LOC102019714 uncharacterized LOC102019714 NW_004955497 4488636 4491965 - 102019714 AGCD01062577;GBDF01076815;XR_264204 MODEL 9024043 protein-coding Aqp11 aquaporin 11 ENCODES a protein that exhibits glycerol channel activity (ortholog); hydrogen peroxide channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN endosomal lumen acidification (ortholog); glycerol transmembrane transport (ortholog); glycoprotein biosynthetic process (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955414 14245682 14260717 - 102009594 AGCD01015144;AGCD01015145;AGCD01015146;GBDF01161980;XM_005379835 XP_005379892 MODEL 9035698 protein-coding Fkbp8 FKBP prolyl isomerase 8 ENCODES a protein that exhibits calmodulin binding (ortholog); disordered domain specific binding (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell fate specification (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH clubfoot (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); spina bifida (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial envelope (ortholog); mitochondrion (ortholog) NW_004955524 3037825 3044296 + 102023733 AGCD01068853;GBDF01003178;XM_013507284;XM_013507285 XP_013362738;XP_013362739 MODEL 10083626 ncrna LOC106147134 uncharacterized LOC106147134 NW_004955408 290815 298054 - 106147134 AGCD01007915;GBBH01106671;XR_001231891 MODEL 8734614 protein-coding Ptk2 protein tyrosine kinase 2 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); cell migration (ortholog); PARTICIPATES IN integrin mediated signaling pathway; long term potentiation; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); ciliary basal body (ortholog) NW_004955461 14337914 14622779 - 102025551 AGCD01049055;AGCD01049056;GBBH01185452;GBCB01040518;XM_005398062;XM_005398063;XM_013521315;XM_013521316;XM_013521317;XM_013521318;XM_013521319;XM_013521320;XM_013521321;XM_013521322;XM_013521323 XP_005398119;XP_005398120;XP_013376769;XP_013376770;XP_013376771;XP_013376772;XP_013376773;XP_013376774;XP_013376775;XP_013376776;XP_013376777 MODEL 8859908 ncrna LOC102003575 uncharacterized LOC102003575 NW_004955433 12281187 12287342 + 102003575 AGCD01031661;XR_001234717;XR_261586 MODEL 8893105 protein-coding Tra2a transformer 2 alpha homolog ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); skin disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 25759649 25784128 - 102015297 AGCD01011173;AGCD01011174;GBDJ01001545;XM_005377400 XP_005377457 MODEL 8977210 protein-coding LOC102024182 trafficking protein particle complex subunit 2-like NW_004955405 29926824 29930245 - 102024182 AGCD01005262;GBDF01119098;XM_005374461;XR_259410 XP_005374518 MODEL 9050654 protein-coding LOC102022507 acyl carrier protein, mitochondrial NW_004955493 2134657 2139543 - 102022507 AGCD01060927;GBCC01013347;GBCE01030161;XM_013504895 XP_013360349 MODEL 39132378 snrna U6 U6 spliceosomal RNA 39131729 rrna 5S_rRNA 5S ribosomal RNA 9038514 protein-coding Tsen2 tRNA splicing endonuclease subunit 2 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Deglutition Disorders (ortholog); genetic disease (ortholog); hemolytic-uremic syndrome (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955429 14970105 14997459 + 102018956 AGCD01028787;AGCD01028788;GBDK01001142;XM_005387020;XM_005387021;XM_013515519;XR_001234537;XR_261333 XP_005387077;XP_005387078;XP_013370973 MODEL 39132494 rrna 5S_rRNA 5S ribosomal RNA 9054498 protein-coding Herc3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955474 11725323 11871132 - 102023467 AGCD01054633;AGCD01054634;AGCD01054635;AGCD01054636;AGCD01054637;AGCD01054638;AGCD01054639;AGCD01054640;AGCD01054641;GBDJ01190987;XM_005401446;XM_005401448;XM_013502723;XM_013502724 XP_005401503;XP_005401505;XP_013358177;XP_013358178 MODEL 8711121 protein-coding Aste1 asteroid structure-specific endonuclease 1 ENCODES a protein that exhibits 3' overhang single-stranded DNA endodeoxyribonuclease activity (ortholog); single-stranded DNA endodeoxyribonuclease activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH Lynch syndrome (ortholog); mismatch repair cancer syndrome (ortholog) NW_004955501 7373713 7383092 + 102011561 AGCD01064214;GBDF01225117;XM_013505735;XR_001231517;XR_001231518 XP_013361189 MODEL 9031797 protein-coding Pdrg1 p53 and DNA damage regulated 1 ASSOCIATED WITH Liver Neoplasms (ortholog) NW_004955422 29052599 29059727 + 102012214 AGCD01023378;GBDF01085394;XM_005384881;XM_013514201 XP_005384938;XP_013369655 MODEL 8740501 protein-coding Bmal1 basic helix-loop-helix ARNT like 1 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); bHLH transcription factor binding (ortholog); DNA binding (ortholog); INVOLVED IN autophagy (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); antidepressant type abuse (ortholog); FOUND IN chromatoid body (ortholog); CLOCK-BMAL transcription complex (ortholog); cytoplasm (ortholog) NW_004955414 28652663 28748360 + 102018716 AGCD01015682;AGCD01015683;AGCD01015684;AGCD01015685;GBDF01194319;XM_005380316;XM_005380317;XM_005380319;XM_005380321;XM_013511990;XM_013511991 XP_005380373;XP_005380374;XP_005380376;XP_005380378;XP_013367444;XP_013367445 MODEL 8749713 protein-coding Wdr62 WD repeat domain 62 INVOLVED IN centriole replication (ortholog); cerebral cortex development (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH autosomal recessive primary microcephaly (ortholog); complex cortical dysplasia with other brain malformations (ortholog); Dwarfism (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); nucleus (ortholog) NW_004955468 2504181 2545982 - 102011425 AGCD01051824;AGCD01051825;GBDF01003421;XM_013522434;XM_013522435;XM_013522436;XM_013522437 XP_013377888;XP_013377889;XP_013377890;XP_013377891 MODEL 8951581 protein-coding LOC102017380 L-amino-acid oxidase-like NW_004955537 2570651 2577698 - 102017380 AGCD01070931;GBDF01175151;XM_005410719 XP_005410776 MODEL 8950981 protein-coding Chek1 checkpoint kinase 1 ENCODES a protein that exhibits histone H3T11 kinase activity (ortholog); protein domain specific binding (ortholog); protein kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic process involved in development (ortholog); cellular response to caffeine (ortholog); PARTICIPATES IN G2/M DNA damage checkpoint pathway; p53 signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Hereditary Neoplastic Syndromes (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); chromosome, telomeric region (ortholog) NW_004955412 26627606 26650554 + 102021953 AGCD01013204;GBDF01278392;XM_005378464 XP_005378521 MODEL 8995981 pseudo LOC102019715 translationally-controlled tumor protein pseudogene NW_004955500 3829536 3830051 - 102019715 AGCD01063758 MODEL 39131889 snrna U1 U1 spliceosomal RNA 8840774 protein-coding LOC102012500 uncharacterized LOC102012500 NW_004955456 6824286 6831920 + 102012500 AGCD01046378;GBDF01048469;XM_013520512;XR_001236319;XR_001236320 XP_013375966 MODEL 9022984 protein-coding Timm17a translocase of inner mitochondrial membrane 17A ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955406 38020886 38031651 + 102020305 AGCD01006582;GBDF01003865;XM_005375197 XP_005375254 MODEL 8848891 protein-coding Atp8b1 ATPase phospholipid transporting 8B1 ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); cardiolipin binding (ortholog); lipid transporter activity (ortholog); INVOLVED IN aminophospholipid transport (ortholog); apical protein localization (ortholog); bile acid and bile salt transport (ortholog); ASSOCIATED WITH benign recurrent intrahepatic cholestasis 1 (ortholog); genetic disease (ortholog); intrahepatic cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955402 41994993 42113380 - 102007071 AGCD01001030;AGCD01001031;AGCD01001032;GBDK01361540;XM_005372979;XM_013510988 XP_005373036;XP_013366442 MODEL 8914789 ncrna LOC102010085 uncharacterized LOC102010085 NW_004955518 1844184 1923729 + 102010085 AGCD01067766;AGCD01067767;AGCD01067768;AGCD01067769;GBDJ01260326;XR_264565 MODEL 9009435 protein-coding LOC102007094 uncharacterized LOC102007094 NW_004955411 33570 60551 + 102007094 AGCD01011450;XM_013510711 XP_013366165 MODEL 39134075 misc_rna 7SK 7SK RNA 8783948 protein-coding Irf2bp2 interferon regulatory factor 2 binding protein 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN immature B cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); common variable immunodeficiency 14 (ortholog); Immune Deficiency, Familial Variable (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955492 4889878 4895508 - 102024244 AGCD01060734;AGCD01060735;GBBH01002287;GBCQ01073372;XM_005405019 XP_005405076 MODEL 39133804 misc_rna 7SK 7SK RNA 10235856 pseudo LOC106150107 gamma-secretase subunit APH-1A pseudogene NW_004955465 10400655 10402220 - 106150107 AGCD01050508 MODEL 39133252 snrna U4 U4 spliceosomal RNA 8978856 ncrna LOC102024185 uncharacterized LOC102024185 NW_004955453 16940401 16952753 - 102024185 AGCD01044916;GBDJ01248425;XR_001236187 MODEL 8809712 protein-coding Sfmbt2 Scm like with four mbt domains 2 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 23691648 23913781 - 102006670 AGCD01022193;AGCD01022194;AGCD01022195;AGCD01022196;AGCD01022197;AGCD01022198;AGCD01022199;GBDI01384258;XM_005383870;XM_005383871;XM_013513767;XM_013513768;XM_013513769;XM_013513771;XM_013513772;XM_013513773 XP_005383927;XP_005383928;XP_013369221;XP_013369222;XP_013369223;XP_013369225;XP_013369226;XP_013369227 MODEL 8827915 pseudo LOC102005294 stromal membrane-associated protein 1 pseudogene NW_004955521 63437 64755 + 102005294 AGCD01068128 MODEL 8866609 protein-coding Aggf1 angiogenic factor with G-patch and FHA domains 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH syndactyly (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955425 23847502 23873964 - 102018948 AGCD01025861;AGCD01025862;GBDI01125628;XM_005386032 XP_005386089 MODEL 8753322 trna Trnaa-ggc transfer RNA alanine (anticodon GGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955403;NW_004955407;NW_004955423;NW_004955421;NW_004955454 2513557;3403311;23453225;6344906;5926569 2513628;3403382;23453296;6344977;5926641 +;+;+;+;- 101978815 AGCD01001737;AGCD01006858;AGCD01021736;AGCD01024005;AGCD01045196 MODEL 9006267 protein-coding Tsen34 tRNA splicing endonuclease subunit 34 INVOLVED IN tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Deglutition Disorders (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955604 84072 89419 - 102011716 AGCD01076861;GBCE01054099;XM_005414852;XM_005414853;XM_005414854;XM_005414855;XM_013510089 XP_005414909;XP_005414910;XP_005414911;XP_005414912;XP_013365543 MODEL 8914127 protein-coding Ttll9 tubulin tyrosine ligase like 9 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN protein polyglutamylation (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); polycystic ovary syndrome (ortholog); pre-malignant neoplasm (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955422 29061323 29105196 - 102012772 AGCD01023378;GBCE01064654;XM_005384882;XM_005384883 XP_005384939;XP_005384940 MODEL 8780167 ncrna LOC102018125 uncharacterized LOC102018125 NW_004955523 895086 911354 - 102018125 AGCD01068485;GBCE01011399;XR_264635 MODEL 9015846 pseudo LOC102019999 ubiquitin-fold modifier 1 pseudogene NW_004955414 20499886 20500110 + 102019999 AGCD01015376 MODEL 8901865 protein-coding Plekhh1 pleckstrin homology, MyTH4 and FERM domain containing H1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955466 2616627 2653804 - 102014029 AGCD01050750;AGCD01050751;GBDJ01316571;XM_013521892 XP_013377346 MODEL 8964150 pseudo LOC102010868 transformer-2 protein homolog alpha pseudogene NW_004955406 19929201 19930073 - 102010868 AGCD01006095 MODEL 9033649 protein-coding Cav2 caveolin 2 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); heterotrimeric G-protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN basement membrane organization (ortholog); caveola assembly (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; syndecan signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Autoimmune Myocarditis (ortholog); high grade glioma (ortholog); FOUND IN acrosomal membrane (ortholog); caveola (ortholog); caveolar macromolecular signaling complex (ortholog) NW_004955432 22240041 22242200 + 102005623 AGCD01031251;GBDK01002096;GBDK01002097;XM_005388157 XP_005388214 MODEL 8981518 protein-coding Ptk2b protein tyrosine kinase 2 beta ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); enzyme binding (ortholog); INVOLVED IN actin filament organization (ortholog); activation of GTPase activity (ortholog); activation of Janus kinase activity (ortholog); PARTICIPATES IN endothelin signaling pathway; fibroblast growth factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); bone disease (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cell body (ortholog) NW_004955403 49856056 49970800 + 102003931 AGCD01002951;AGCD01002952;AGCD01002953;GBCE01000568;XM_005373738;XM_005373739;XM_005373740;XM_005373741;XM_013514189;XM_013514191 XP_005373795;XP_005373796;XP_005373797;XP_005373798;XP_013369643;XP_013369645 MODEL 8856312 protein-coding LOC102019719 OX-2 membrane glycoprotein-like NW_004955427 12648153 12658811 + 102019719 AGCD01027222;GBDK01037625;XM_005386612 XP_005386669 MODEL 8851058 protein-coding Chek2 checkpoint kinase 2 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to bisphenol A (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); bone osteosarcoma (ortholog); breast cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); PML body (ortholog) NW_004955455 2969113 3008004 - 102022254 AGCD01045607;GBDF01014927;XM_005396164;XM_013520374;XM_013520375;XM_013520376;XM_013520377;XM_013520378;XM_013520379 XP_005396221;XP_013375828;XP_013375829;XP_013375830;XP_013375831;XP_013375832;XP_013375833 MODEL 9029406 protein-coding Hnrnpu heterogeneous nuclear ribonucleoprotein U ENCODES a protein that exhibits actin binding (ortholog); ATP binding (ortholog); chromatin binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); cardiac muscle cell development (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); colorectal cancer (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cell surface (ortholog); centrosome (ortholog) NW_004955406 8000269 8021554 - 102008494 AGCD01005787;AGCD01005788;GBDK01191704;XM_005374785;XM_005374787 XP_005374842;XP_005374844 MODEL 8735282 protein-coding LOC102021507 zinc finger protein 883-like NW_004955624 87138 106468 - 102021507 AGCD01077434;AGCD01077435;AGCD01077436;XM_013510159 XP_013365613 MODEL 39134076 misc_rna 7SK 7SK RNA 39132500 rrna 5S_rRNA 5S ribosomal RNA 9050409 protein-coding Dnajc21 DnaJ heat shock protein family (Hsp40) member C21 ASSOCIATED WITH Bone Marrow Failure Syndrome 3 (ortholog); Congenital Bone Marrow Failure Syndromes (ortholog); Funnel Chest (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog) NW_004955426 20060734 20076549 + 102009300 AGCD01026562;GBDF01046748;GBDF01046750;XM_013515016 XP_013370470 MODEL 8988998 protein-coding Gpi glucose-6-phosphate isomerase ENCODES a protein that exhibits glucose-6-phosphate isomerase activity (ortholog); monosaccharide binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN fructose 6-phosphate metabolic process (ortholog); glucose 6-phosphate metabolic process (ortholog); learning or memory (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Animal Disease Models (ortholog) NW_004955468 3980999 4007553 + 102004264 AGCD01051878;AGCD01051879;AGCD01051880;GBDF01000353;XM_005400002 XP_005400059 MODEL 39134386 misc_rna 7SK 7SK RNA 8976899 protein-coding Atp8b2 ATPase phospholipid transporting 8B2 ENCODES a protein that exhibits phosphatidylcholine flippase activity (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955545 850522 872650 + 102011048 AGCD01071821;GBDF01017530;XM_005411518;XM_013508246 XP_005411575;XP_013363700 MODEL 8967288 pseudo LOC102006045 60S ribosomal protein L31 pseudogene NW_004955495 3574458 3577550 + 102006045 AGCD01061862;XM_005406145 MODEL 9020458 protein-coding Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 ENCODES a protein that exhibits endopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); cornea development in camera-type eye (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) NW_004955517 1302560 1443708 + 102029105 AGCD01067596;AGCD01067597;AGCD01067598;GBBH01004780;GBDJ01010259;XM_013506939 XP_013362393 MODEL 8808532 protein-coding Pds5a PDS5 cohesin associated factor A INVOLVED IN anterior/posterior pattern specification (ortholog); heart morphogenesis (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH Cornelia de Lange syndrome (ortholog); Neurodevelopmental Disorders (ortholog); Prostatic Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) NW_004955443 7475434 7603548 + 102022550 AGCD01038285;AGCD01038286;GBDF01192301;GBDF01192302;XM_005391971 XP_005392028 MODEL 8866344 protein-coding Aqp2 aquaporin 2 ENCODES a protein that exhibits actin binding (ortholog); glycerol transmembrane transporter activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); cell volume homeostasis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH cardiomyopathy (ortholog); diabetes insipidus (ortholog); diabetic ketoacidosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); clathrin-coated vesicle (ortholog) NW_004955547 547770 555764 + 102009548 AGCD01072162;GBCQ01008561;XM_005411855;XM_005411856;XM_013508504;XM_013508505 XP_005411912;XP_005411913;XP_013363958;XP_013363959 MODEL 8986430 protein-coding Wdr64 WD repeat domain 64 NW_004955406 10317674 10439077 - 102017950 AGCD01005855;AGCD01005856;AGCD01005857;AGCD01005858;AGCD01005859;AGCD01005860;AGCD01005861;GBDF01159246;GBDF01159247;XM_013520508 XP_013375962 MODEL 8707854 protein-coding Fkbp9 FKBP prolyl isomerase 9 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955617 196845 234431 + 102010012 AGCD01077274;AGCD01077275;GBDF01081147;XM_005414998;XM_013510142 XP_005415055;XP_013365596 MODEL 8968574 protein-coding LOC102003578 telomerase protein component 1-like NW_004955433 39594 81672 + 102003578 AGCD01031301;XM_013516101 XP_013371555 MODEL 8978965 protein-coding Tsen54 tRNA splicing endonuclease subunit 54 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH amblyopia (ortholog); cerebellar hypoplasia (ortholog); Deglutition Disorders (ortholog) NW_004955553 2367476 2376704 + 102027464 AGCD01072935;GBDF01083927;XM_005412297;XM_013508627;XM_013508628 XP_005412354;XP_013364081;XP_013364082 MODEL 8713605 protein-coding Ebna1bp2 EBNA1 binding protein 2 FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955537 2792295 2800249 - 102020955 AGCD01070938;GBCE01095072;XM_005410632 XP_005410689 MODEL 9002812 protein-coding Fancc FA complementation group C INVOLVED IN brain morphogenesis (ortholog); cellular response to oxidative stress (ortholog); gamete generation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aspirin-induced respiratory disease (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955422 22031825 22246478 - 102004830 AGCD01023145;AGCD01023146;AGCD01023147;AGCD01023148;AGCD01023149;AGCD01023150;AGCD01023151;AGCD01023152;GBDF01041485;XM_005384680;XM_013514336;XM_013514337;XM_013514338 XP_005384737;XP_013369790;XP_013369791;XP_013369792 MODEL 8980792 protein-coding Tra2b transformer 2 beta homolog ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); poly-purine tract binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cerebral cortex regionalization (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); macular degeneration (ortholog); FOUND IN nuclear inner membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955420 21707618 21728186 + 102008321 AGCD01021159;GBDF01002404;XM_005383286 XP_005383343 MODEL 39132379 snrna U6 U6 spliceosomal RNA 8785322 protein-coding LOC102022508 zinc finger protein 426-like NW_004955495 1108859 1135681 - 102022508 AGCD01061673;GBDK01293405;XM_013505074;XM_013505075;XM_013505076 XP_013360528;XP_013360529;XP_013360530 MODEL 39133257 snrna U4 U4 spliceosomal RNA 8817725 protein-coding Herc4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); spermatogenesis (ortholog); FOUND IN cytosol (ortholog) NW_004955425 20310264 20418154 - 102030097 AGCD01025728;AGCD01025729;AGCD01025730;GBDF01111610;XM_013514841;XM_013514842;XM_013514843;XM_013514844;XM_013514845;XM_013514846;XM_013514847 XP_013370295;XP_013370296;XP_013370297;XP_013370298;XP_013370299;XP_013370300;XP_013370301 MODEL 8760097 protein-coding Bmerb1 bMERB domain containing 1 INVOLVED IN negative regulation of cell motility involved in cerebral cortex radial glia guided migration (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Thoracic Aortic Aneurysm 4 (ortholog); FOUND IN microtubule cytoskeleton (ortholog) NW_004955442 317334 442514 + 102022429 AGCD01037419;AGCD01037420;AGCD01037421;AGCD01037422;AGCD01037423;AGCD01037424;AGCD01037425;GBDF01078842;XM_005391062;XM_005391063 XP_005391119;XP_005391120 MODEL 8962367 protein-coding Cherp calcium homeostasis endoplasmic reticulum protein ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); sarcoplasmic reticulum membrane (ortholog) NW_004955524 1224698 1235192 + 102029435 AGCD01068739;AGCD01068740;GBBH01142712;GBDF01005378;XM_013507227 XP_013362681 MODEL 10069435 ncrna LOC106147135 uncharacterized LOC106147135 NW_004955521 4460280 4468467 + 106147135 AGCD01068262;GBDI01239940;XR_001231892 MODEL 8800680 protein-coding Agk acylglycerol kinase ENCODES a protein that exhibits acylglycerol kinase activity (ortholog); ATP-dependent diacylglycerol kinase activity (ortholog); ceramide kinase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); lipid phosphorylation (ortholog); protein insertion into mitochondrial inner membrane (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 38 (ortholog); genetic disease (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955494 1924026 2041914 - 102015858 AGCD01061429;AGCD01061430;AGCD01061431;AGCD01061432;AGCD01061433;AGCD01061434;GBCE01104960;XM_005405405;XM_005405406;XM_013504986;XM_013504987;XM_013504988 XP_005405462;XP_005405463;XP_013360440;XP_013360441;XP_013360442 MODEL 8914273 ncrna LOC102017386 uncharacterized LOC102017386 NW_004955439 13038292 13094346 + 102017386 AGCD01035955;AGCD01035956;GBDF01279672;XR_001235175;XR_001235176;XR_261987;XR_261988 MODEL 8754757 protein-coding Kifc1 kinesin family member C1 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic spindle assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog) NW_004955437 1923136 1941094 + 102004639 AGCD01034243;AGCD01034244;GBBH01205563;XM_005389490;XM_013517018;XM_013517019;XM_013517020 XP_005389547;XP_013372472;XP_013372473;XP_013372474 MODEL 8986967 ncrna LOC102012502 uncharacterized LOC102012502 NW_004955456 10052149 10054952 + 102012502 AGCD01046517;GBDF01261841;XR_262892 MODEL 39131893 snrna U1 U1 spliceosomal RNA 39131730 rrna 5S_rRNA 5S ribosomal RNA 8775394 protein-coding Adamtsl1 ADAMTS like 1 ASSOCIATED WITH orofacial cleft 1 (ortholog) NW_004955434 20929569 21392319 + 102023839 AGCD01032623;AGCD01032624;AGCD01032625;AGCD01032626;AGCD01032627;AGCD01032628;GBBH01066763;XM_005388721;XM_005388722 XP_005388778;XP_005388779 MODEL 8802648 protein-coding Baz2b bromodomain adjacent to zinc finger domain 2B ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleus (ortholog) NW_004955449 14008538 14278227 + 102004438 AGCD01042156;AGCD01042157;AGCD01042158;AGCD01042159;AGCD01042160;AGCD01042161;AGCD01042162;AGCD01042163;GBDK01140899;XM_013518699;XM_013518700;XM_013518701;XM_013518702;XM_013518703;XM_013518704;XM_013518705 XP_013374153;XP_013374154;XP_013374155;XP_013374156;XP_013374157;XP_013374158;XP_013374159 MODEL 8924851 protein-coding LOC102007097 olfactory receptor 8B3-like NW_004955412 25257775 25259655 - 102007097 AGCD01013143;XM_005378418 XP_005378475 MODEL 9064279 protein-coding Irf2bpl interferon regulatory factor 2 binding protein like ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN development of secondary female sexual characteristics (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 946044 949315 - 102006610 AGCD01034965;GBDK01005190;XM_013517171 XP_013372625 MODEL 8823551 protein-coding Rgcc regulator of cell cycle ENCODES a protein that exhibits kinase activator activity (ortholog); protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); complement receptor mediated signaling pathway (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955518 4788857 4800273 - 102024839 AGCD01067838;GBBH01089561;XM_005409116 XP_005409173 MODEL 8744340 protein-coding LOC102015107 olfactory receptor 287 NW_004955477 11097729 11098882 + 102015107 AGCD01055716;XM_005402085 XP_005402142 MODEL 8946105 protein-coding Astl astacin like metalloendopeptidase ENCODES a protein that exhibits aspartic-type peptidase activity (ortholog); glutamic-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cell adhesion (ortholog); fertilization (ortholog); negative regulation of binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 11 (ortholog); FOUND IN cortical granule (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955470 3719254 3732598 - 102025566 AGCD01052708;GBCQ01144366;XM_013522845 XP_013378299 MODEL 10367368 protein-coding LOC106150108 collagen alpha-1(VIII) chain-like NW_004955465 3546577 3559365 - 106150108 AGCD01050381;AGCD01050382;GBDF01292680;XM_013521773 XP_013377227 MODEL 8803800 protein-coding LOC102024186 cytochrome P450 11B2, mitochondrial-like NW_004955454 1627309 1662347 + 102024186 AGCD01044977;XM_013520011 XP_013375465 MODEL 8798678 protein-coding Alms1 ALMS1 centrosome and basal body associated protein ENCODES a protein that exhibits alpha-actinin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Alstrom syndrome (ortholog); Bardet-Biedl syndrome (ortholog); cone-rod dystrophy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955424 12130496 12258684 - 102015416 AGCD01024596;AGCD01024597;AGCD01024598;AGCD01024599;AGCD01024600;GBDF01000586;GBDF01000588;XM_013514678 XP_013370132 MODEL 9014440 protein-coding LOC102021508 rhox homeobox family member 1-like NW_004955711 3374 5839 - 102021508 AGCD01078141;GBDF01163219;XM_013510180 XP_013365634 MODEL 9008630 pseudo LOC102005302 protein C3orf33 pseudogene NW_004955438 15478440 15479305 - 102005302 AGCD01035370 MODEL 8724293 protein-coding Sfn stratifin ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein binding (ortholog); phosphoserine residue binding (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); establishment of skin barrier (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH endometrial carcinoma (ortholog); Esophageal Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955452 6217519 6218481 + 102024419 AGCD01044097;GBDJ01006661;XM_005394883 XP_005394940 MODEL 8802924 protein-coding Hnrnpul1 heterogeneous nuclear ribonucleoprotein U like 1 ENCODES a protein that exhibits enzyme binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955555 219185 254979 + 102011916 AGCD01073024;GBCQ01004649;XM_005412325;XM_005412328;XM_005412329;XM_005412330;XM_005412331;XM_013508689 XP_005412382;XP_005412385;XP_005412386;XP_005412387;XP_005412388;XP_013364143 MODEL 9047879 protein-coding Ttn titin ENCODES a protein that exhibits actin filament binding (ortholog); actinin binding (ortholog); ankyrin binding (ortholog); INVOLVED IN adult heart development (ortholog); cardiac muscle cell development (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); autosomal dominant centronuclear myopathy (ortholog); FOUND IN A band (ortholog); condensed nuclear chromosome (ortholog); I band (ortholog) NW_004955403 18057344 18328389 + 102024966 AGCD01002094;AGCD01002095;AGCD01002096;GBCB01022163;JN632946;XM_005373371;XM_005373372;XM_013512603;XM_013512608 AEO94691;XP_005373428;XP_005373429;XP_013368057;XP_013368062 MODEL 8749671 protein-coding Aqp3 aquaporin 3 (Gill blood group) ENCODES a protein that exhibits glycerol channel activity (ortholog); identical protein binding (ortholog); polyol transmembrane transporter activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); glycerol transmembrane transport (ortholog); odontogenesis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH brain edema (ortholog); brain ischemia (ortholog); Esophageal Neoplasms (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955472 2234770 2239753 + 102007885 AGCD01053446;GBBH01003723;XM_005401098 XP_005401155 MODEL 8924018 protein-coding Chfr checkpoint with forkhead and ring finger domains ENCODES a protein that exhibits nucleotide binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN meiotic spindle checkpoint signaling (ortholog); mitotic cell cycle (ortholog); mitotic G2/M transition checkpoint (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Endometrial Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleus (ortholog); PML body (ortholog) NW_004955482 233485 267064 + 102016596 AGCD01057167;AGCD01057168;GBDK01193286;XM_005402938;XM_005402939 XP_005402995;XP_005402996 MODEL 8985295 protein-coding Wdr7 WD repeat domain 7 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN synaptic vesicle (ortholog) NW_004955402 41071895 41437717 + 102004341 AGCD01001008;AGCD01001009;AGCD01001010;AGCD01001011;AGCD01001012;AGCD01001013;AGCD01001014;AGCD01001015;GBDF01080343;XM_013510978;XM_013510979 XP_013366432;XP_013366433 MODEL 8932881 protein-coding Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN negative regulation of actin filament depolymerization (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) NW_004955441 10818982 10921224 + 102025179 AGCD01037094;AGCD01037095;GBDF01083557;XM_005390924;XM_005390925;XM_005390927;XM_005390928;XM_005390929;XM_005390930;XM_005390931;XM_005390932;XM_005390933;XM_013517541;XR_262069 XP_005390981;XP_005390982;XP_005390984;XP_005390985;XP_005390986;XP_005390987;XP_005390988;XP_005390989;XP_005390990;XP_013372995 MODEL 8910300 protein-coding Gfi1b growth factor independent 1B transcriptional repressor ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of granulocyte differentiation (ortholog); regulation of erythrocyte differentiation (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955513 2273267 2281850 + 102004627 AGCD01066872;GBBH01144928;XM_005408400;XM_005408401 XP_005408457;XP_005408458 MODEL 9064143 protein-coding Cav3 caveolin 3 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium channel regulator activity (ortholog); connexin binding (ortholog); INVOLVED IN actin filament organization (ortholog); cardiac muscle cell development (ortholog); caveola assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Chromosome 3, Monosomy 3p25 (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dystrophin-associated glycoprotein complex (ortholog) NW_004955561 326008 335911 + 102027240 AGCD01073821;GBCB01040641;XM_005412999 XP_005413056 MODEL 8709854 protein-coding Ptk6 protein tyrosine kinase 6 ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell migration (ortholog); cellular response to retinoic acid (ortholog); intestinal epithelial cell differentiation (ortholog); ASSOCIATED WITH keratoconus (ortholog); neuronal ceroid lipofuscinosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955528 687996 695596 + 102009754 AGCD01069542;GBCQ01083858;XM_005409962 XP_005410019 MODEL 8764498 pseudo LOC102019720 60S acidic ribosomal protein P0 pseudogene NW_004955428 20054037 20055072 - 102019720 AGCD01028100 MODEL 39132381 snrna U6 U6 spliceosomal RNA 8887487 protein-coding Trabd TraB domain containing ENCODES a protein that exhibits mitochondrion-mitochondrion outer membrane tether activity (ortholog); INVOLVED IN mitochondrial fusion (ortholog); protein localization to mitochondrion (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); TOM complex (ortholog) NW_004955413 33229796 33233686 + 102023348 AGCD01014658;GBCE01114750;GBCQ01098684;XM_005379547;XM_005379548 XP_005379604;XP_005379605 MODEL 39134077 misc_rna 7SK 7SK RNA 8909408 trna Trnaa-ugc transfer RNA alanine (anticodon UGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978816 AGCD01006174;AGCD01008468;AGCD01026910;AGCD01041021;AGCD01044158;AGCD01045001;AGCD01050627;AGCD01050630;AGCD01051583;AGCD01057078;AGCD01057309;AGCD01064062;AGCD01069830 MODEL 8888511 protein-coding Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 ENCODES a protein that exhibits chylomicron binding (ortholog); high-density lipoprotein particle binding (ortholog); lipase binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); intracellular protein transport (ortholog); lipid transport (ortholog); ASSOCIATED WITH familial GPIHBP1 deficiency (ortholog); familial lipoprotein lipase deficiency (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955454 1965627 1972479 + 102027041 AGCD01044997;GBDF01041040;XM_005395759;XM_005395760;XM_013520008 XP_005395816;XP_005395817;XP_013375462 MODEL 8947702 gene LOC102020001 Ig heavy chain V-I region 5-like NW_004955470 608115 608658 - 102020001 AGCD01052616;XM_005400822 MODEL 8936265 pseudo LOC102010087 heparan-alpha-glucosaminide N-acetyltransferase pseudogene NW_004955434 9056708 9057564 - 102010087 AGCD01032287 MODEL 10284678 ncrna LOC106147136 uncharacterized LOC106147136 NW_004955522 3748621 3757161 - 106147136 AGCD01068395;GBDK01158580;XR_001231897 MODEL 9046039 protein-coding Bmf Bcl2 modifying factor INVOLVED IN anoikis (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of autophagy (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN acrosomal vesicle (ortholog); actin cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955416 7048654 7068917 - 102014243 AGCD01016961;GBBH01186132;XM_005381214;XM_005381215 XP_005381271;XP_005381272 MODEL 8914419 protein-coding Atp8b3 ATPase phospholipid transporting 8B3 INVOLVED IN binding of sperm to zona pellucida (ortholog); phospholipid translocation (ortholog); FOUND IN acrosomal vesicle (ortholog); membrane (ortholog) NW_004955495 6222764 6242104 + 102025922 AGCD01062058;AGCD01062059;AGCD01062060;AGCD01062061;GBDF01007630;XM_005405949;XM_005405950;XM_005405951;XM_005405952 XP_005406006;XP_005406007;XP_005406008;XP_005406009 MODEL 8707549 protein-coding Timm17b translocase of inner mitochondrial membrane 17B FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955543 425076 430767 - 102027342 AGCD01071585;GBCE01032810;XM_005411288 XP_005411345 MODEL 9048878 protein-coding Sfpq splicing factor proline and glutamine rich ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); alternative mRNA splicing, via spliceosome (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); human immunodeficiency virus infectious disease (ortholog); skin disease (ortholog); FOUND IN chromatin (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) NW_004955452 13267968 13283823 - 102022877 AGCD01044397;AGCD01044398;GBBH01000997;GBCQ01037138;XM_005395311 XP_005395368 MODEL 10371996 protein-coding Fkbpl FKBP prolyl isomerase like INVOLVED IN regulation of angiogenesis (ortholog); regulation of blood vessel branching (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog) NW_004955437 592098 594244 - 106146274 AGCD01034150;GBDJ01373671;XM_013516901;XM_013516902 XP_013372355;XP_013372356 MODEL 8975208 protein-coding Agl amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase ENCODES a protein that exhibits 4-alpha-glucanotransferase activity (ortholog); amylo-alpha-1,6-glucosidase activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen degradation pathway; glycogen storage disease type III pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); glycogen storage disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); inclusion body (ortholog) NW_004955435 4622142 4684439 + 102030231 AGCD01032838;AGCD01032839;GBCB01003861;GBCQ01179765;XM_013516512 XP_013371966 MODEL 39133805 misc_rna 7SK 7SK RNA 39131897 snrna U1 U1 spliceosomal RNA 39132501 rrna 5S_rRNA 5S ribosomal RNA 8878986 pseudo LOC102022509 guanylate-binding protein 4-like NW_004955423 4993794 5018433 - 102022509 AGCD01023551 MODEL 9023689 protein-coding Adamtsl2 ADAMTS like 2 ENCODES a protein that exhibits microfibril binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); lobar bronchus epithelium development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH acromicric dysplasia (ortholog); Congenital Hand Deformities (ortholog); Contracture (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955513 2849310 2879130 + 102019833 AGCD01066891;GBCE01022223;XM_013506730;XM_013506731;XM_013506732;XM_013506733 XP_013362184;XP_013362185;XP_013362186;XP_013362187 MODEL 8835999 protein-coding Bbc3 BCL2 binding component 3 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH brain ischemia (ortholog); Burkitt lymphoma (ortholog); Esophageal Neoplasms (ortholog); FOUND IN lysosome (ortholog); mitochondrion (ortholog) NW_004955574 1167790 1174966 - 102005648 AGCD01075159;AGCD01075160;GBDF01158488;XM_005413854;XM_013509578 XP_005413911;XP_013365032 MODEL 8824466 protein-coding Dnajc22 DnaJ heat shock protein family (Hsp40) member C22 NW_004955500 8150186 8154905 + 102030215 AGCD01063981;GBBH01171388;XM_013505629 XP_013361083 MODEL 8948788 ncrna LOC102015108 uncharacterized LOC102015108 NW_004955416 14789578 14812657 + 102015108 AGCD01017283;GBDK01390246;XR_001233365 MODEL 39133163 snrna U4 U4 spliceosomal RNA 8729757 protein-coding LOC102018133 keratin, type II microfibrillar, component 7C-like NW_004955547 2600470 2610128 - 102018133 AGCD01072286;AGCD01072287;XM_013508445 XP_013363899 MODEL 39132382 snrna U6 U6 spliceosomal RNA 8839807 protein-coding Pds5b PDS5 cohesin associated factor B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); mitotic sister chromatid cohesion (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955431 13083229 13268680 - 102009532 AGCD01030281;AGCD01030282;AGCD01030283;AGCD01030284;AGCD01030285;AGCD01030286;AGCD01030287;AGCD01030288;AGCD01030289;AGCD01030290;AGCD01030291;AGCD01030292;AGCD01030293;GBCQ01010023;XM_005387707;XM_005387708;XM_005387709;XM_005387710;XM_013515891 XP_005387764;XP_005387765;XP_005387766;XP_005387767;XP_013371345 MODEL 9067964 ncrna LOC102005311 uncharacterized LOC102005311 NW_004955443 3210313 3216060 - 102005311 AGCD01038188;GBDF01281727;XR_262174 MODEL 8886306 ncrna LOC102006049 uncharacterized LOC102006049 NW_004955425 7368402 7403190 + 102006049 AGCD01025384;GBDF01196098;XR_001234261;XR_001234262;XR_001234263;XR_001234264 MODEL 8745670 protein-coding Ptk7 protein tyrosine kinase 7 (inactive) INVOLVED IN actin cytoskeleton organization (ortholog); axis elongation (ortholog); cell migration (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cell-cell junction (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955437 9037933 9094237 + 102019323 AGCD01034515;GBDK01100991;XM_005390133;XM_013516906 XP_005390190;XP_013372360 MODEL 8936409 protein-coding Astn1 astrotactin 1 INVOLVED IN cell migration (ortholog); cell-cell adhesion (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955406 16445738 16742185 - 102017742 AGCD01005997;AGCD01005998;AGCD01005999;AGCD01006000;GBDJ01299410;XM_005374905;XM_005374906;XM_013520987;XM_013520991 XP_005374962;XP_005374963;XP_013376441;XP_013376445 MODEL 8890043 protein-coding LOC102021509 keratin-associated protein 3-3 NW_004955451 15419155 15419938 - 102021509 AGCD01043607;GBDJ01056995;XM_005394379 XP_005394436 MODEL 8996263 ncrna LOC102003579 uncharacterized LOC102003579 NW_004955522 3869752 3871054 + 102003579 AGCD01068402;GBDI01286574;XR_264629 MODEL 39131731 rrna 5S_rRNA 5S ribosomal RNA 9055678 protein-coding Tsfm Ts translation elongation factor, mitochondrial INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 3 (ortholog); dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 5489551 5498572 + 102012162 AGCD01047494;AGCD01047495;GBDI01117542;XM_005397417;XM_005397418 XP_005397474;XP_005397475 MODEL 8851291 protein-coding Ebp EBP cholestenol delta-isomerase ENCODES a protein that exhibits C-8 sterol isomerase activity (ortholog); cholestenol delta-isomerase activity (ortholog); cholesterol-5,6-oxide hydrolase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH chondrodysplasia punctata (ortholog); connective tissue disease (ortholog); Developmental Disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) NW_004955543 92553 98370 + 102019534 AGCD01071557;GBCE01066044;XM_005411260 XP_005411317 MODEL 10095735 ncrna LOC106147137 uncharacterized LOC106147137 NW_004955522 3720870 3734233 - 106147137 AGCD01068394;GBCQ01192751;XR_001231898 MODEL 9058895 protein-coding Ttpa alpha tocopherol transfer protein ENCODES a protein that exhibits lipid transfer activity (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN embryonic placenta development (ortholog); intermembrane lipid transfer (ortholog); intracellular pH reduction (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Animal Disease Models (ortholog); Ataxia (ortholog); FOUND IN late endosome (ortholog) NW_004955444 15877972 15891949 + 102024725 AGCD01039158;GBCQ01154710;XM_005392171 XP_005392228 MODEL 8712506 ncrna LOC102007099 uncharacterized LOC102007099 NW_004955413 26714 54739 + 102007099 AGCD01013432;AGCD01013433;AGCD01013434;AGCD01013435;GBDF01192955;XR_001232930;XR_260037 MODEL 8714588 protein-coding Timm21 translocase of inner mitochondrial membrane 21 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955402 57586651 57598817 + 102009241 AGCD01001501;GBDF01305105;XM_005373066;XR_259107;XR_259108 XP_005373123 MODEL 39134387 misc_rna 7SK 7SK RNA 9015286 protein-coding Wdr70 WD repeat domain 70 ENCODES a protein that exhibits enzyme binding (ortholog) NW_004955426 22062872 22344596 + 102016728 AGCD01026604;AGCD01026605;AGCD01026606;AGCD01026607;AGCD01026608;AGCD01026609;AGCD01026610;AGCD01026611;AGCD01026612;AGCD01026613;AGCD01026614;AGCD01026615;AGCD01026616;GBDF01125379;XM_013514960;XM_013514961 XP_013370414;XP_013370415 MODEL 8749846 protein-coding Cavin1 caveolae associated protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); rRNA primary transcript binding (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); protein secretion (ortholog); rRNA transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH congenital generalized lipodystrophy (ortholog); congenital generalized lipodystrophy type 4 (ortholog); diabetes mellitus (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955451 16364915 16374523 - 102017734 AGCD01043673;GBDK01017777;XM_005394458 XP_005394515 MODEL 8885094 protein-coding Herc5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 ENCODES a protein that exhibits ISG15 transferase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN innate immune response (ortholog); ISG15-protein conjugation (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH endometriosis (ortholog); hepatocellular carcinoma (ortholog); Human Influenza (ortholog); FOUND IN cytoplasm (ortholog) NW_004955474 11954915 11991849 - 102024558 AGCD01054643;GBDF01085655;XM_013502750 XP_013358204 MODEL 10227367 protein-coding LOC106150109 vegetative cell wall protein gp1-like NW_004955465 3912130 3915205 - 106150109 AGCD01050399;XM_013521774 XP_013377228 MODEL 8716376 ncrna LOC102019721 uncharacterized LOC102019721 NW_004955429 21904557 21908894 - 102019721 AGCD01029013;GBDF01264646;XR_261379 MODEL 8937518 protein-coding LOC102010870 keratin-associated protein 20-2-like NW_004955407 30265855 30266145 + 102010870 AGCD01007631;AGCD01007632;XM_005375652 XP_005375709 MODEL 8839076 ncrna LOC102017389 uncharacterized LOC102017389 NW_004955440 10499029 10501698 + 102017389 AGCD01036392;GBDF01235637;XR_262015 MODEL 8854923 protein-coding Alox12b arachidonate 12-lipoxygenase, 12R type ENCODES a protein that exhibits arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 8(R)-lipoxygenase activity (ortholog); linoleate 9S-lipoxygenase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); bicellular tight junction assembly (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH adenocarcinoma (ortholog); autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955467 8876186 8887980 + 102025448 AGCD01051477;GBDI01086683;XM_005399437 XP_005399494 MODEL 8755864 protein-coding Adamtsl3 ADAMTS like 3 ASSOCIATED WITH lung adenocarcinoma (ortholog); squamous cell carcinoma (ortholog) NW_004955416 12818153 13132960 - 102027299 AGCD01017213;AGCD01017214;AGCD01017215;AGCD01017216;AGCD01017217;AGCD01017218;GBDJ01194632;XM_005381454;XM_013512535;XM_013512536;XM_013512537 XP_005381511;XP_013367989;XP_013367990;XP_013367991 MODEL 9024894 protein-coding Hnrnpul2 heterogeneous nuclear ribonucleoprotein U like 2 ASSOCIATED WITH autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955599 492171 502622 + 102010964 AGCD01076653;AGCD01076654;GBBH01033234;XM_005414777 XP_005414834 MODEL 8949963 protein-coding Kifc2 kinesin family member C2 NW_004955454 3087168 3093916 + 102007506 AGCD01045051;GBBH01163884;XM_005395892;XM_005395893 XP_005395949;XP_005395950 MODEL 10156556 protein-coding Ptma prothymosin alpha ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenoma (ortholog); Lung Neoplasms (ortholog); polycystic kidney disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955453 4036503 4037788 - 106149798 AGCD01044672;GBBH01002333;GBDF01000055;XM_013519995 XP_013375449 MODEL 8868043 protein-coding Bmi1 BMI1 proto-oncogene, polycomb ring finger ENCODES a protein that exhibits chromatin binding (ortholog); promoter-specific chromatin binding (ortholog); RING-like zinc finger domain binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); chronic pancreatitis (ortholog); FOUND IN heterochromatin (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955429 6548586 6553730 - 102017361 AGCD01028551;GBDK01001879;GBDK01001881;XM_013515495 XP_013370949 MODEL 8772604 protein-coding Agmat agmatinase (putative) ENCODES a protein that exhibits arginase activity (ortholog); guanidinobutyrase activity (ortholog); guanidinopropionase activity (ortholog); FOUND IN mitochondrion (ortholog) NW_004955527 2563705 2572421 + 102011475 AGCD01069453;GBCB01087179;XM_005409867 XP_005409924 MODEL 8948687 protein-coding Irf3 interferon regulatory factor 3 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH asthma (ortholog); bacterial pneumonia (ortholog); Herpes Simplex Encephalitis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955559 1223986 1228671 + 102010317 AGCD01073637;GBBH01002978;XM_005412858;XM_013508980;XM_013508981;XM_013508982 XP_005412915;XP_013364434;XP_013364435;XP_013364436 MODEL 8946184 protein-coding Gfm1 G elongation factor mitochondrial 1 ENCODES a protein that exhibits GTPase activity (ortholog); translation elongation factor activity (ortholog); INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 1 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955448 9390576 9432919 + 102027473 AGCD01041472;AGCD01041473;GBDF01082492;XM_005393104 XP_005393161 MODEL 8854107 protein-coding Rgl1 ral guanine nucleotide dissociation stimulator like 1 NW_004955406 22419137 22670537 + 102027940 AGCD01006158;AGCD01006159;AGCD01006160;GBDF01090295;XM_005375043;XM_005375044;XM_005375045;XM_005375046 XP_005375100;XP_005375101;XP_005375102;XP_005375103 MODEL 8849395 pseudo LOC102024188 biogenesis of lysosome-related organelles complex 1 subunit 1 pseudogene NW_004955454 2557743 2558120 + 102024188 AGCD01045023;XM_005396109 MODEL 8978269 protein-coding Trabd2b TraB domain containing 2B ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); positive regulation of protein-containing complex assembly (ortholog); proteolysis (ortholog); FOUND IN organelle membrane (ortholog); plasma membrane (ortholog) NW_004955464 10612515 10817725 + 102007093 AGCD01050127;GBCE01168317;XM_005398637 XP_005398694 MODEL 8853520 pseudo LOC102012508 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955459 6804477 6804982 + 102012508 AGCD01048085;XR_263017 MODEL 8965555 protein-coding LOC102020003 phospholipid scramblase 2 NW_004955474 11145325 11187876 + 102020003 AGCD01054611;AGCD01054612;AGCD01054613;GBDF01051584;XM_005401438 XP_005401495 MODEL 39132383 snrna U6 U6 spliceosomal RNA 8832194 protein-coding Gpkow G-patch domain and KOW motifs ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH X-linked Microhydranencephaly (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955543 625247 633065 - 102008987 AGCD01071595;GBCE01115774;XM_013508145;XM_013508146 XP_013363599;XP_013363600 MODEL 8861722 protein-coding LOC102018136 myeloid cell surface antigen CD33-like NW_004955559 971745 982328 - 102018136 AGCD01073623;AGCD01073624;AGCD01073625;GBDJ01063533;XM_013508946 XP_013364400 MODEL 8873942 protein-coding Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955433 14609275 14621774 + 102020699 AGCD01031724;AGCD01031725;GBDF01005639;XM_005388367;XM_005388368;XM_013516271;XM_013516273 XP_005388424;XP_005388425;XP_013371725;XP_013371727 MODEL 8861340 pseudo LOC102005312 uncharacterized LOC102005312 NW_004955443 13092892 13167982 + 102005312 AGCD01038462;AGCD01038463;AGCD01038464 MODEL 8728131 protein-coding Aqp4 aquaporin 4 ENCODES a protein that exhibits identical protein binding (ortholog); water channel activity (ortholog); INVOLVED IN carbon dioxide transport (ortholog); cell-cell adhesion (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH Alpers-Huttenlocher syndrome (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN astrocyte end-foot (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955772 1160 10709 + 102007844 AGCD01078317;GBCB01001173;GBDJ01395917;XM_005415104 XP_005415161 MODEL 8738163 protein-coding Fkrp fukutin related protein ENCODES a protein that exhibits dystroglycan binding (ortholog); identical protein binding (ortholog); laminin binding (ortholog); INVOLVED IN adult walking behavior (ortholog); basement membrane organization (ortholog); bone mineralization (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 3 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2I (ortholog); FOUND IN extracellular space (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955574 779672 789621 + 102017286 AGCD01075128;AGCD01075129;GBBH01007373;GBBH01007374;XM_013509559 XP_013365013 MODEL 8896297 protein-coding Pdss1 decaprenyl diphosphate synthase subunit 1 ENCODES a protein that exhibits all-trans-decaprenyl-diphosphate synthase activity (ortholog); all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN isoprenoid biosynthetic process (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH coenzyme Q10 deficiency disease (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN heterotetrameric polyprenyl diphosphate synthase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955429 2783847 2818204 - 102004953 AGCD01028438;GBCC01032026;GBDI01106203;XM_013515433 XP_013370887 MODEL 39133806 misc_rna 7SK 7SK RNA 8996930 protein-coding Plekhh3 pleckstrin homology, MyTH4 and FERM domain containing H3 NW_004955451 16523822 16531563 - 102028607 AGCD01043687;AGCD01043688;GBBH01062427;GBCB01003667;XM_013519145 XP_013374599 MODEL 39131732 rrna 5S_rRNA 5S ribosomal RNA 39131901 snrna U1 U1 spliceosomal RNA 8794582 protein-coding Atp8b4 ATPase phospholipid transporting 8B4 (putative) FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955409 4148110 4383309 + 102005446 AGCD01009280;AGCD01009281;AGCD01009282;AGCD01009283;AGCD01009284;AGCD01009285;AGCD01009286;AGCD01009287;GBBH01111267;XM_005376677;XM_013510346;XM_013510347;XM_013510348;XM_013510349;XM_013510350;XM_013510351;XM_013510352;XM_013510353;XM_013510354 XP_005376734;XP_013365800;XP_013365801;XP_013365802;XP_013365803;XP_013365804;XP_013365805;XP_013365806;XP_013365807;XP_013365808 MODEL 8991305 protein-coding Sfr1 SWI5 dependent homologous recombination repair protein 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); double-strand break repair via homologous recombination (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955485 6520747 6525359 - 102026429 AGCD01058621;GBDK01153601;XM_005403788;XM_005403789;XM_005403790;XM_005403791;XM_013504071;XM_013504072 XP_005403845;XP_005403846;XP_005403847;XP_005403848;XP_013359525;XP_013359526 MODEL 10341822 ncrna LOC106147138 uncharacterized LOC106147138 NW_004955522 2709989 2713971 + 106147138 AGCD01068377;GBDF01144333;XR_001231899 MODEL 15036839 trna Trnac-aca transfer RNA cysteine (anticodon ACA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978832 9000566 protein-coding Ptms parathymosin ENCODES a protein that exhibits zinc ion binding (ortholog) NW_004955413 4376955 4378253 + 102029065 AGCD01013612;GBCQ01007684;GBDJ01018919;XM_013511349 XP_013366803 MODEL 8851519 ncrna LOC102007102 uncharacterized LOC102007102 NW_004955468 7023137 7030091 + 102007102 AGCD01051993;GBDF01224168;XR_263396 MODEL 39134388 misc_rna 7SK 7SK RNA 8906069 protein-coding Irf4 interferon regulatory factor 4 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); defense response to protozoan (ortholog); myeloid dendritic cell differentiation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); anaplastic large cell lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955465 12497534 12512529 - 102026089 AGCD01050549;GBBH01228624;GBDJ01163364;XM_013521871;XM_013521872;XM_013521873 XP_013377325;XP_013377326;XP_013377327 MODEL 8911961 pseudo LOC102010093 ubiquitin carboxyl-terminal hydrolase isozyme L5 pseudogene NW_004955439 3610566 3611918 + 102010093 AGCD01035681 MODEL 8822685 ncrna LOC102015109 uncharacterized LOC102015109 NW_004955417 7902837 7947887 - 102015109 AGCD01018019;GBDF01304393;XR_001233465;XR_260465 MODEL 8726807 protein-coding Fancd2 FA complementation group D2 ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN brain morphogenesis (ortholog); cellular response to oxidative stress (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Fanconi anemia (ortholog); FOUND IN condensed chromosome (ortholog); nuclear body (ortholog); nucleolus (ortholog) NW_004955561 1460080 1538026 + 102015783 AGCD01073855;AGCD01073856;GBDF01081668;XM_005413059;XM_005413060;XM_005413062;XM_013509097;XM_013509098;XM_013509099 XP_005413116;XP_005413117;XP_005413119;XP_013364551;XP_013364552;XP_013364553 MODEL 8971519 pseudo LOC102006050 nicotinamide phosphoribosyltransferase-like NW_004955426 5308768 5326304 - 102006050 AGCD01026121 MODEL 8835072 protein-coding Chga chromogranin A INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); mast cell activation (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); end stage renal disease (ortholog); IgA glomerulonephritis (ortholog); FOUND IN chromaffin granule (ortholog); extracellular space (ortholog); neuronal dense core vesicle (ortholog) NW_004955438 15092267 15104321 + 102029121 AGCD01035359;GBDI01062982;XM_005390335;XM_005390336;XM_005390337;XM_005390338;XM_005390339 XP_005390392;XP_005390393;XP_005390394;XP_005390395;XP_005390396 MODEL 8959113 ncrna LOC102003582 uncharacterized LOC102003582 NW_004955526 1543834 1552568 + 102003582 AGCD01069274;GBDF01182742;XR_264657 MODEL 39132502 rrna 5S_rRNA 5S ribosomal RNA 8893141 protein-coding Hoatz HOATZ cilia and flagella associated protein INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); flagellated sperm motility (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog) NW_004955412 13254671 13275832 + 102017209 AGCD01012829;AGCD01012830;GBCE01133720;XM_005378073;XM_005378074;XM_005378075 XP_005378130;XP_005378131;XP_005378132 MODEL 39134078 misc_rna 7SK 7SK RNA 8714095 protein-coding Ebpl EBP like FOUND IN endoplasmic reticulum (ortholog) NW_004955431 3114160 3122448 - 102012014 AGCD01029949;GBDK01284622;XM_005387891 XP_005387948 MODEL 9005788 protein-coding Tsg101 tumor susceptibility 101 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell differentiation (ortholog); endosome to lysosome transport (ortholog); exosomal secretion (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955414 33154812 33193769 - 102023023 AGCD01015799;AGCD01015800;GBCE01077499;XM_005380422;XM_005380423 XP_005380479;XP_005380480 MODEL 8936968 protein-coding Bbip1 BBSome interacting protein 1 INVOLVED IN B cell homeostasis (ortholog); cilium assembly (ortholog); eating behavior (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 18 (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); FOUND IN BBSome (ortholog); ciliary basal body (ortholog); ciliary membrane (ortholog) NW_004955485 518161 530575 + 102011009 AGCD01058451;AGCD01058452;GBDF01050063;GBDK01146124;XM_005403735 XP_005403792 MODEL 9007885 protein-coding Bmp1 bone morphogenetic protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN positive regulation of cartilage development (ortholog); proteolysis (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); genetic disease (ortholog); osteogenesis imperfecta (ortholog); FOUND IN extracellular space (ortholog); vesicle (ortholog) NW_004955403 45660591 45693724 + 102015913 AGCD01002826;GBBH01142618;GBCE01002413;XM_013513783 XP_013369237 MODEL 9036363 protein-coding Cavin2 caveolae associated protein 2 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN plasma membrane tubulation (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 7459038 7471809 + 102023546 AGCD01001857;GBDK01390302;XM_005373285 XP_005373342 MODEL 9057401 protein-coding LOC102019722 vomeronasal type-1 receptor 90-like NW_004955429 12528002 12528931 + 102019722 AGCD01028725;XM_005387253 XP_005387310 MODEL 39133191 snrna U4 U4 spliceosomal RNA 8773462 pseudo LOC102010871 60S ribosomal protein L39 pseudogene NW_004955455 11174068 11175753 - 102010871 AGCD01045985;XM_005396506;XM_005396507 MODEL 8798891 protein-coding Dnajc24 DnaJ heat shock protein family (Hsp40) member C24 ENCODES a protein that exhibits ATPase activator activity (ortholog); ferrous iron binding (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of ATP-dependent activity (ortholog); protein histidyl modification to diphthamide (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955476 9742909 9780321 + 102022695 AGCD01055396;AGCD01055397;GBDF01121205;XM_005401768;XM_005401769 XP_005401825;XP_005401826 MODEL 8967189 protein-coding Rgl2 ral guanine nucleotide dissociation stimulator like 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of Ral protein signal transduction (ortholog) NW_004955437 1851005 1857567 - 102003279 AGCD01034239;GBBH01030712;XM_005389484 XP_005389541 MODEL 8790731 pseudo LOC102017390 DNA/RNA-binding protein KIN17 pseudogene NW_004955440 8992888 9029279 + 102017390 AGCD01036366;AGCD01036367 MODEL 8996407 protein-coding Adamtsl4 ADAMTS like 4 ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN epithelial cell development (ortholog); extracellular matrix organization (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH autosomal recessive isolated ectopia lentis 2 (ortholog); Craniosynostosis with Ectopia Lentis (ortholog); Ectopia Lentis (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) NW_004955413 258078 269324 - 102010983 AGCD01013454;AGCD01013455;GBCQ01066864;GBDI01082370;XM_005378671;XM_013511417 XP_005378728;XP_013366871 MODEL 8911878 pseudo LOC102006051 cyclin-G1 pseudogene NW_004955427 21210303 21211288 - 102006051 AGCD01027434 MODEL 9060654 protein-coding Herpud2 HERPUD family member 2 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog) NW_004955460 7461025 7495242 + 102006986 AGCD01048483;GBCE01096963;GBDF01002338;XM_005397772 XP_005397829 MODEL 39131733 rrna 5S_rRNA 5S ribosomal RNA 8833221 protein-coding Ttpal alpha tocopherol transfer protein like NW_004955445 12871355 12897733 - 102020621 AGCD01039764;GBDF01223108;XM_005392480;XM_005392481;XM_005392482;XM_013518256 XP_005392537;XP_005392538;XP_005392539;XP_013373710 MODEL 9016982 protein-coding Timm22 translocase of inner mitochondrial membrane 22 ENCODES a protein that exhibits protein transporter activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN carrier pathway of mitochondrial protein import; ASSOCIATED WITH combined oxidative phosphorylation deficiency 43 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM22 mitochondrial import inner membrane insertion complex (ortholog) NW_004955481 2494943 2501532 + 102029078 AGCD01056876;GBDF01153078;XM_005402649 XP_005402706 MODEL 8865198 protein-coding Agmo alkylglycerol monooxygenase ENCODES a protein that exhibits glyceryl-ether monooxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); obsolete membrane lipid metabolic process (ortholog); triglyceride biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955410 18713191 18881824 - 102020639 AGCD01011010;AGCD01011011;AGCD01011012;AGCD01011013;AGCD01011014;XM_005415288 XP_005415345 MODEL 9059391 protein-coding Wdr72 WD repeat domain 72 INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta hypomaturation type 2A3 (ortholog); amelogenesis imperfecta type 1C (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); extracellular region (ortholog) NW_004955409 1451506 1631976 + 102016672 AGCD01009176;AGCD01009177;AGCD01009178;AGCD01009179;AGCD01009180;GBCQ01031346;XM_005376626;XM_013510272;XM_013510273;XM_013510274 XP_005376683;XP_013365726;XP_013365727;XP_013365728 MODEL 8796948 protein-coding Atp9a ATPase phospholipid transporting 9A ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN negative regulation of exosomal secretion (ortholog); neuron projection morphogenesis (ortholog); regulation of endocytic recycling (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with poor growth and behavioral abnormalities (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); late endosome (ortholog) NW_004955445 6876937 6991513 + 102018538 AGCD01039527;AGCD01039528;AGCD01039529;AGCD01039530;AGCD01039531;GBCB01044420;XM_005392293;XM_013518319;XM_013518320;XM_013518321 XP_005392350;XP_013373773;XP_013373774;XP_013373775 MODEL 9042292 protein-coding Gfm2 GTP dependent ribosome recycling factor mitochondrial 2 ENCODES a protein that exhibits GTPase activity (ortholog); translation elongation factor activity (ortholog); INVOLVED IN mitochondrial translation (ortholog); mitochondrial translational elongation (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 1 (ortholog); combined oxidative phosphorylation deficiency 39 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955425 25904020 25942384 + 102030098 AGCD01025939;GBDF01192750;XM_005386062;XM_005386064;XM_013514801 XP_005386119;XP_005386121;XP_013370255 MODEL 8748436 pseudo LOC102021510 60S ribosomal protein L36 pseudogene NW_004955403 57896896 57898033 + 102021510 AGCD01003167;XM_005373867 MODEL 8949222 trna Trnac-gca transfer RNA cysteine (anticodon GCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978833 AGCD01043512;AGCD01043513;AGCD01043523;AGCD01057606;AGCD01060445;AGCD01060446;AGCD01060454;AGCD01060455;AGCD01060458;AGCD01060459;AGCD01060460;AGCD01060462;AGCD01064185;AGCD01079692;AGCD01079693;AGCD01079767;AGCD01079768 MODEL 8973541 protein-coding LOC102024194 chymase NW_004955409 35831686 35834710 + 102024194 AGCD01010434;GBCE01119297;XM_005376994;XM_005376995 XP_005377051;XP_005377052 MODEL 8923055 ncrna LOC102020009 uncharacterized LOC102020009 NW_004955417 16241947 16248800 - 102020009 AGCD01018255;GBDJ01106535;XR_260478 MODEL 8895379 protein-coding Alox15 arachidonate 15-lipoxygenase ENCODES a protein that exhibits arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 15-lipoxygenase activity (ortholog); hepoxilin-epoxide hydrolase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); arachidonate metabolic process (ortholog); bone mineralization (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955467 10032792 10039789 - 102009820 AGCD01051543;GBDJ01148490;XM_005399581;XM_013522022 XP_005399638;XP_013377476 MODEL 8720449 pseudo LOC102012517 60S ribosomal protein L38 pseudogene NW_004955412 19711838 19712048 + 102012517 AGCD01012971 MODEL 8820365 ncrna LOC102010095 uncharacterized LOC102010095 NW_004955440 18493660 18495295 + 102010095 AGCD01036610;GBDF01126738;XR_001235248 MODEL 8726626 protein-coding Ptn pleiotrophin ENCODES a protein that exhibits carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to D-galactosamine (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH adrenal carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Body Weight (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955494 5580264 5681848 + 102006927 AGCD01061522;AGCD01061523;GBCE01001843;XM_013505031;XM_013505032 XP_013360485;XP_013360486 MODEL 39134389 misc_rna 7SK 7SK RNA 39132384 snrna U6 U6 spliceosomal RNA 8862592 protein-coding Irf6 interferon regulatory factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell development (ortholog); cranial skeletal system development (ortholog); keratinocyte differentiation (ortholog); ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); Congenital Limb Deformities (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955489 2404773 2434729 + 102020923 AGCD01059870;GBDI01261695;XM_005404525;XM_005404526;XM_005404527;XM_005404528;XM_005404529;XM_005404530;XM_005404531;XM_005404532;XM_013504473;XM_013504474;XM_013504475 XP_005404582;XP_005404583;XP_005404584;XP_005404585;XP_005404586;XP_005404587;XP_005404588;XP_005404589;XP_013359927;XP_013359928;XP_013359929 MODEL 8702945 pseudo LOC102005316 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial pseudogene NW_004955445 11834175 11839386 - 102005316 AGCD01039717;XM_005392425 MODEL 8939668 pseudo LOC102018140 PDZ and LIM domain protein 1-like NW_004955448 372904 378142 + 102018140 AGCD01041230 MODEL 8779362 protein-coding Fancd2os FANCD2 opposite strand INVOLVED IN negative regulation of testosterone biosynthetic process (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); Fanconi anemia complementation group D2 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955561 1538960 1542130 - 102017072 AGCD01073856;GBDF01078505;XM_005413064 XP_005413121 MODEL 8915280 protein-coding Kifc3 kinesin family member C3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial cell-cell adhesion (ortholog); Golgi organization (ortholog); microtubule-based process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; FOUND IN centrosome (ortholog); Golgi apparatus (ortholog); kinesin complex (ortholog) NW_004955433 15365944 15428502 - 102004843 AGCD01031752;GBBH01214893;XM_013516178;XM_013516179;XM_013516180;XM_013516181;XM_013516182;XM_013516183;XM_013516184;XM_013516185;XM_013516186;XM_013516187;XM_013516188;XM_013516189;XM_013516190;XM_013516191;XM_013516192 XP_013371632;XP_013371633;XP_013371634;XP_013371635;XP_013371636;XP_013371637;XP_013371638;XP_013371639;XP_013371640;XP_013371641;XP_013371642;XP_013371643;XP_013371644;XP_013371645;XP_013371646 MODEL 8962766 protein-coding Plekhj1 pleckstrin homology domain containing J1 NW_004955495 5904410 5907211 + 102017470 AGCD01062043;GBDF01082206;XM_005405916 XP_005405973 MODEL 8964843 protein-coding Pdss2 decaprenyl diphosphate synthase subunit 2 ENCODES a protein that exhibits all-trans-decaprenyl-diphosphate synthase activity (ortholog); all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN cerebellum development (ortholog); isoprenoid biosynthetic process (ortholog); regulation of body fluid levels (ortholog); ASSOCIATED WITH coenzyme Q10 deficiency disease (ortholog); focal segmental glomerulosclerosis (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); heterotetrameric polyprenyl diphosphate synthase complex (ortholog); mitochondrial matrix (ortholog) NW_004955411 32426604 32714337 - 102009477 AGCD01012317;AGCD01012318;AGCD01012319;AGCD01012320;AGCD01012321;AGCD01012322;AGCD01012323;AGCD01012324;AGCD01012325;AGCD01012326;AGCD01012327;AGCD01012328;AGCD01012329;AGCD01012330;AGCD01012331;AGCD01012332;AGCD01012333;AGCD01012334;AGCD01012335;GBCQ01099837;XM_005377839 XP_005377896 MODEL 9030578 protein-coding Chgb chromogranin B ASSOCIATED WITH prostate cancer (ortholog); FOUND IN secretory granule (ortholog) NW_004955415 16311769 16324962 + 102014891 AGCD01016376;GBDI01355443;XM_005380843 XP_005380900 MODEL 9038755 protein-coding Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 ENCODES a protein that exhibits (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN glyoxylate catabolic process (ortholog); glyoxylate metabolic process (ortholog); oxalate metabolic process (ortholog); ASSOCIATED WITH cholestasis (ortholog); genetic disease (ortholog); primary hyperoxaluria (ortholog); FOUND IN mitochondrion (ortholog) NW_004955507 3687449 3711939 + 102028995 AGCD01065632;AGCD01065633;GBDK01169834;XM_005407616;XM_005407617;XM_005407618 XP_005407673;XP_005407674;XP_005407675 MODEL 8743504 protein-coding LOC102007103 cytochrome P450 2D17-like NW_004955413 27588186 27597795 - 102007103 AGCD01014517;GBCB01038107;XM_005379404;XM_013511460;XM_013511461 XP_005379461;XP_013366914;XP_013366915 MODEL 8783759 protein-coding Ttr transthyretin ENCODES a protein that exhibits hormone binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; retinoic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenosquamous lung carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); protein-containing complex (ortholog) NW_004955402 18921235 18927976 + 102018348 AGCD01000543;GBDF01125276;XM_005372743 XP_005372800 MODEL 8897703 protein-coding Astn2 astrotactin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); INVOLVED IN establishment of body hair planar orientation (ortholog); negative regulation of protein localization to cell surface (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); autistic disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); FOUND IN cell pole (ortholog); endosome (ortholog); membrane (ortholog) NW_004955419 10486200 11387553 + 102003344 AGCD01019945;AGCD01019946;AGCD01019947;AGCD01019948;AGCD01019949;AGCD01019950;AGCD01019951;AGCD01019952;AGCD01019953;AGCD01019954;AGCD01019955;GBBH01184955;XM_005382610;XM_013513260;XM_013513261;XM_013513263 XP_005382667;XP_013368714;XP_013368715;XP_013368717 MODEL 9032646 ncrna LOC102022510 uncharacterized LOC102022510 NW_004955424 1640539 1648980 + 102022510 AGCD01024243;XR_261026 MODEL 8922317 protein-coding Bmp10 bone morphogenetic protein 10 ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adult heart development (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Fibrosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955424 16124526 16130723 + 102018743 AGCD01024738;XM_005385656 XP_005385713 MODEL 8976625 protein-coding Fktn fukutin ENCODES a protein that exhibits phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2M (ortholog); cardiomyopathy (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955419 20933662 20994793 - 102028090 AGCD01020258;AGCD01020259;AGCD01020260;AGCD01020261;AGCD01020262;GBCE01181662;XM_005382776;XM_013513225 XP_005382833;XP_013368679 MODEL 8825671 protein-coding Aqp5 aquaporin 5 ENCODES a protein that exhibits identical protein binding (ortholog); water channel activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); carbon dioxide transport (ortholog); cellular hypotonic response (ortholog); PARTICIPATES IN E-cadherin signaling pathway; water transport pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Bothnian type palmoplantar keratoderma (ortholog); brain ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955547 558296 562455 + 102010096 AGCD01072162;AGCD01072163;GBBH01004211;XM_005411857 XP_005411914 MODEL 9019794 protein-coding Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); GPI anchor phospholipase D activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to cholesterol (ortholog); cellular response to insulin stimulus (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955483 2501751 2552855 + 102007554 AGCD01057679;AGCD01057680;GBCB01012012;GBCE01171043;XM_013503821 XP_013359275 MODEL 8742730 pseudo LOC102003583 zinc transporter ZIP2 pseudogene NW_004955436 12539750 12540990 + 102003583 AGCD01033843 MODEL 39131922 snrna U1 U1 spliceosomal RNA 10346809 protein-coding LOC106150110 uncharacterized LOC106150110 NW_004955465 10014897 10017658 - 106150110 AGCD01050498;AGCD01050499;XM_013521776 XP_013377230 MODEL 8734060 pseudo LOC102005317 tubulin alpha-1C chain-like NW_004955569 1268620 1269973 + 102005317 AGCD01074645 MODEL 8952039 protein-coding Adamtsl5 ADAMTS like 5 ENCODES a protein that exhibits heparin binding (ortholog); microfibril binding (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); microfibril (ortholog) NW_004955764 4813 12653 + 102005545 AGCD01078306;GBDK01142911;XM_005415096;XM_013510187 XP_005415153;XP_013365641 MODEL 9058926 protein-coding Alox15b arachidonate 15-lipoxygenase type B ENCODES a protein that exhibits arachidonate 15-lipoxygenase activity (ortholog); arachidonate 8(S)-lipoxygenase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); endocannabinoid signaling pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN adherens junction (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955467 8896740 8906032 - 102025779 AGCD01051477;GBDJ01402897;XM_005399438 XP_005399495 MODEL 10089208 ncrna LOC106147139 uncharacterized LOC106147139 NW_004955408 6243631 6264305 + 106147139 AGCD01008169;AGCD01008170;XR_001231901 MODEL 39134079 misc_rna 7SK 7SK RNA 8714296 protein-coding Ecd ecdysoneless cell cycle regulator ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); INVOLVED IN cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of G1/S transition of mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955437 18537726 18566870 + 102021706 AGCD01034800;AGCD01034801;AGCD01034802;AGCD01034803;GBDF01044847;XM_005389989 XP_005390046 MODEL 8843955 protein-coding Tradd TNFRSF1A associated via death domain ENCODES a protein that exhibits death domain binding (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); extrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; Toll-like receptor signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH Liver Reperfusion Injury (ortholog); Optic Nerve Injuries (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955484 9456268 9462425 + 102014361 AGCD01058415;GBDK01143327;XM_005403692;XM_013503962;XM_013503963 XP_005403749;XP_013359416;XP_013359417 MODEL 8924879 protein-coding Tsga10 testis specific 10 ENCODES a protein that exhibits structural molecule activity (ortholog); ASSOCIATED WITH spermatogenic failure 26 (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); motile cilium (ortholog) NW_004955470 5376749 5471904 - 102008086 AGCD01052749;AGCD01052750;AGCD01052751;GBDI01255512;XM_005400731;XM_005400734;XM_013522795;XM_013522796;XM_013522797;XM_013522799;XM_013522800 XP_005400788;XP_005400791;XP_013378249;XP_013378250;XP_013378251;XP_013378253;XP_013378254 MODEL 8853036 protein-coding Cavin3 caveolae associated protein 3 ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); cortical actin cytoskeleton organization (ortholog); negative regulation of fermentation (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955414 22052885 22054672 - 102018916 AGCD01015441;GBDJ01019235;XM_005380131 XP_005380188 MODEL 39133086 snrna U4 U4 spliceosomal RNA 8836456 protein-coding Ago1 argonaute RISC component 1 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); double-stranded RNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN miRNA metabolic process (ortholog); miRNA processing (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH alcohol dependence (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955452 13935028 13967281 + 102023867 AGCD01044443;AGCD01044444;GBCE01137382;XM_005395161;XM_013519525 XP_005395218;XP_013374979 MODEL 8731328 protein-coding Dnajc27 DnaJ heat shock protein family (Hsp40) member C27 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN nucleus (ortholog) NW_004955469 7046671 7078666 - 102003431 AGCD01052405;GBDF01185604;XM_013522664 XP_013378118 MODEL 39133807 misc_rna 7SK 7SK RNA 8860335 protein-coding Atp9b ATPase phospholipid transporting 9B ASSOCIATED WITH Cocaine-Related Disorders (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) NW_004955402 62231875 62537311 + 102022987 AGCD01001637;AGCD01001638;AGCD01001639;AGCD01001640;AGCD01001641;AGCD01001642;AGCD01001643;GBDF01045223;XM_005373105;XM_005373106;XM_005373107 XP_005373162;XP_005373163;XP_005373164 MODEL 39132506 rrna 5S_rRNA 5S ribosomal RNA 39134390 misc_rna 7SK 7SK RNA 9031253 protein-coding Sfrp1 secreted frizzled related protein 1 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); frizzled binding (ortholog); heparin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone trabecula formation (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); diastolic heart failure (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular matrix (ortholog) NW_004955536 1663721 1702678 + 102015981 AGCD01070766;GBCE01029787;XM_005410533 XP_005410590 MODEL 8895701 protein-coding Irf7 interferon regulatory factor 7 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); defense response to virus (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Human Influenza (ortholog); immunodeficiency 39 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955476 11442781 11445706 + 102013410 AGCD01055458;GBBH01064524;XM_005401824;XM_005401825;XM_005401826;XM_013502973;XM_013502974;XM_013502975;XM_013502976 XP_005401881;XP_005401882;XP_005401883;XP_013358427;XP_013358428;XP_013358429;XP_013358430 MODEL 8789528 protein-coding Timm23b translocase of inner mitochondrial membrane 23 homolog B FOUND IN mitochondrion (ortholog) NW_004955556 414345 435182 - 102025949 AGCD01073175;GBDJ01378436;XM_005412558 XP_005412615 MODEL 8723578 pseudo LOC102019723 40S ribosomal protein S2 pseudogene NW_004955430 2621172 2623152 + 102019723 AGCD01029168;XR_261413 MODEL 9062857 protein-coding Hes1 hes family bHLH transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adenohypophysis development (ortholog); aorta morphogenesis (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955420 14565921 14568447 - 102003971 AGCD01020950;GBDI01068158;XM_005383199 XP_005383256 MODEL 8983068 protein-coding Pdx1 pancreatic and duodenal homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell differentiation (ortholog); cellular response to acadesine (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); cerebral infarction (ortholog); diabetes mellitus (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955497 7281886 7307969 + 102016397 AGCD01062664;AGCD01062665;XM_013505455 XP_013360909 MODEL 8840099 ncrna LOC102015110 uncharacterized LOC102015110 NW_004955417 26741909 26744748 + 102015110 AGCD01018514;GBDF01188695;XR_001233422;XR_260501 MODEL 8787693 protein-coding Chi3l1 chitinase 3 like 1 ENCODES a protein that exhibits chitin binding (ortholog); chitinase activity (ortholog); INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955406 39195101 39201808 - 102008059 AGCD01006621;GBBH01100979;XM_005375251 XP_005375308 MODEL 9049218 protein-coding Wdr73 WD repeat domain 73 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); nucleus organization (ortholog); ASSOCIATED WITH dystonia (ortholog); epilepsy (ortholog); Galloway-Mowat syndrome (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 14471479 14485416 + 102012643 AGCD01017270;AGCD01017271;GBCB01039745;XM_005381498 XP_005381555 MODEL 8798524 protein-coding Homer1 homer scaffold protein 1 ENCODES a protein that exhibits G protein-coupled glutamate receptor binding (ortholog); molecular adaptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to L-glutamate (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); costamere (ortholog) NW_004955425 21644577 21774843 + 102012778 AGCD01025800;AGCD01025801;AGCD01025802;GBBH01099027;XM_005386011 XP_005386068 MODEL 8949646 ncrna LOC102021515 uncharacterized LOC102021515 NW_004955405 40307846 40312195 - 102021515 AGCD01005512;GBDF01157665;XR_001235929;XR_259451;XR_259452 MODEL 15036857 trna Trnad-auc transfer RNA aspartic acid (anticodon AUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978828 8885623 protein-coding Gfod1 Gfo/Idh/MocA-like oxidoreductase domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH coronary artery disease (ortholog) NW_004955465 1235917 1338072 + 102011749 AGCD01050338;GBCB01074136;XM_005398800;XM_005398801;XM_005398803;XM_005398804;XM_013521857 XP_005398857;XP_005398858;XP_005398860;XP_005398861;XP_013377311 MODEL 8708247 protein-coding Rgl3 ral guanine nucleotide dissociation stimulator like 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog) NW_004955495 2304820 2319171 - 102029874 AGCD01061764;AGCD01061765;AGCD01061766;GBCE01074618;XM_013505110 XP_013360564 MODEL 8707413 ncrna LOC102020011 uncharacterized LOC102020011 NW_004955483 8366749 8377144 - 102020011 AGCD01057833;GBDF01162005;XR_001231025;XR_263868 MODEL 8879080 protein-coding LOC102024196 phosphoglycerate mutase 1-like NW_004955462 9673636 9674936 + 102024196 AGCD01049341;XM_013521425 XP_013376879 MODEL 9029471 pseudo LOC102012518 mortality factor 4-like protein 2 NW_004955466 3112875 3113758 - 102012518 AGCD01050786 MODEL 8968190 protein-coding Cavin4 caveolae associated protein 4 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955419 25181395 25188951 - 102011007 AGCD01020374;GBCB01005766;XM_005382806 XP_005382863 MODEL 8906420 protein-coding Ttyh1 tweety family member 1 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); volume-sensitive anion channel activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell-cell adhesion (ortholog); cell-substrate adhesion (ortholog); FOUND IN filopodium membrane (ortholog); filopodium tip (ortholog); membrane (ortholog) NW_004955567 1523534 1538963 + 102012137 AGCD01074479;AGCD01074480;GBCE01034550;XM_005413376;XM_005413377;XM_013509268 XP_005413433;XP_005413434;XP_013364722 MODEL 39132385 snrna U6 U6 spliceosomal RNA 8955178 protein-coding Asxl1 ASXL transcriptional regulator 1 ENCODES a protein that exhibits nuclear retinoic acid receptor binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone development (ortholog); bone marrow development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); atypical chronic myeloid leukemia, BCR-ABL1 negative (ortholog); FOUND IN nucleus (ortholog); PR-DUB complex (ortholog) NW_004955422 28662392 28721896 - 102008234 AGCD01023365;AGCD01023366;GBCB01085932;GBDF01052888;XM_005384868 XP_005384925 MODEL 8865912 protein-coding LOC102018145 cytochrome P450 4V2 INVOLVED IN fatty acid omega-oxidation (ortholog); ASSOCIATED WITH Bietti crystalline corneoretinal dystrophy (ortholog); Choroideremia (ortholog); corneal dystrophy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955403 22870299 22912221 - 102018145 AGCD01002231;AGCD01002232;AGCD01002233;GBCE01187980;GBDK01126781;XM_005373433 XP_005373490 MODEL 8917032 protein-coding Ago2 argonaute RISC catalytic component 2 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); double-stranded RNA binding (ortholog); endoribonuclease activity, cleaving miRNA-paired mRNA (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); gene expression (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH alcohol dependence (ortholog); Cocaine-Related Disorders (ortholog); genetic disease (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955461 14194268 14260949 - 102023879 AGCD01049048;GBDJ01349391;XM_005398054;XM_005398056;XM_005398057;XM_005398058;XM_005398059;XM_013521312;XM_013521313;XM_013521314 XP_005398111;XP_005398113;XP_005398114;XP_005398115;XP_005398116;XP_013376766;XP_013376767;XP_013376768 MODEL 8997274 protein-coding LOC102010097 keratin, type II cytoskeletal 6A-like NW_004955547 2793016 2797170 - 102010097 AGCD01072294;XM_013508500 XP_013363954 MODEL 8940671 protein-coding LOC102006056 olfactory receptor 8J3-like NW_004955511 1507684 1508625 + 102006056 AGCD01066370;XM_005407964 XP_005408021 MODEL 8823246 protein-coding Aqp6 aquaporin 6 ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); monoatomic anion channel activity (ortholog); INVOLVED IN nitrate transmembrane transport (ortholog); odontogenesis (ortholog); renal water transport (ortholog); PARTICIPATES IN water transport pathway; FOUND IN cytoplasmic vesicle membrane (ortholog) NW_004955547 567152 570880 + 102010415 AGCD01072164;GBDK01181608;XM_005411858 XP_005411915 MODEL 8928136 protein-coding Bbln bublin coiled coil protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); bone development (ortholog); FOUND IN cell junction (ortholog); intermediate filament (ortholog); kinetochore microtubule (ortholog) NW_004955570 709009 712573 + 102021188 AGCD01074759;AGCD01074760;GBDF01193225;XM_005413526 XP_005413583 MODEL 39131923 snrna U1 U1 spliceosomal RNA 8979212 protein-coding LOC102010872 zinc finger protein 14-like NW_004955457 13021955 13040077 - 102010872 AGCD01047034;AGCD01047035;GBDF01018457;XM_005397067 XP_005397124 MODEL 10325963 protein-coding LOC106150111 tubulin beta-4B chain-like NW_004955465 10070773 10076073 + 106150111 AGCD01050500;XM_013521777 XP_013377231 MODEL 8938294 ncrna LOC102017392 uncharacterized LOC102017392 NW_004955441 8037181 8089805 + 102017392 AGCD01036974;AGCD01036975;GBDK01341736;XR_262055;XR_262056 MODEL 10277290 ncrna LOC106147140 uncharacterized LOC106147140 NW_004955522 1896065 1898172 + 106147140 AGCD01068364;GBDF01305415;XR_001231900 MODEL 8912687 ncrna LOC102007107 uncharacterized LOC102007107 NW_004955414 22942884 22992663 + 102007107 AGCD01015486;GBDF01051420;XR_260189 MODEL 8736502 protein-coding Adap1 ArfGAP with dual PH domains 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH inflammatory bowel disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955460 8635463 8674455 - 102013805 AGCD01048528;AGCD01048529;GBBH01150083;GBCB01109073;XM_005397794 XP_005397851 MODEL 8720163 protein-coding Traf1 TNF receptor associated factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); thioesterase binding (ortholog); INVOLVED IN positive regulation of pyroptotic inflammatory response (ortholog); regulation of extrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH multiple sclerosis (ortholog); patent ductus arteriosus (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955419 7117869 7145274 + 102021974 AGCD01019874;GBDK01090336;XM_013513240;XM_013513241;XM_013513242;XR_001233625;XR_001233626 XP_013368694;XP_013368695;XP_013368696 MODEL 39132713 snrna U4 U4 spliceosomal RNA 8721581 protein-coding Ptov1 PTOV1 extended AT-hook containing adaptor protein ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955559 1070856 1079052 - 102029454 AGCD01073628;AGCD01073629;GBDK01007823;GBDK01196056;XM_013508969 XP_013364423 MODEL 39133808 misc_rna 7SK 7SK RNA 39131743 rrna 5S_rRNA 5S ribosomal RNA 8846038 protein-coding Fance FA complementation group E INVOLVED IN gene expression (ortholog); homeostasis of number of cells (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); breast cancer (ortholog); colon carcinoma (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) NW_004955437 3369127 3382072 + 102026153 AGCD01034309;AGCD01034310;GBDF01158519;XM_005389553;XM_005389556 XP_005389610;XP_005389613 MODEL 39134391 misc_rna 7SK 7SK RNA 9052662 protein-coding Kin Kin17 DNA and RNA binding protein ENCODES a protein that exhibits double-stranded DNA binding (ortholog); RNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); FOUND IN cytosol (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) NW_004955421 24196909 24234320 - 102009618 AGCD01022209;GBDK01060925;XM_005383878 XP_005383935 MODEL 8823654 protein-coding Plekhm1 pleckstrin homology and RUN domain containing M1 INVOLVED IN autophagosome-lysosome fusion (ortholog); late endosome to lysosome transport (ortholog); lysosome localization (ortholog); ASSOCIATED WITH Autosomal Dominant Osteopetrosis 3 (ortholog); autosomal recessive osteopetrosis 1 (ortholog); autosomal recessive osteopetrosis 6 (ortholog); FOUND IN autolysosome (ortholog); lysosome (ortholog) NW_004955451 18043194 18079808 - 102027259 AGCD01043790;GBDI01179295;XM_005394577;XM_013519289;XM_013519290;XM_013519291;XM_013519292;XM_013519293;XM_013519294;XM_013519295;XM_013519296 XP_005394634;XP_013374743;XP_013374744;XP_013374745;XP_013374746;XP_013374747;XP_013374748;XP_013374749;XP_013374750 MODEL 8707725 pseudo LOC102005318 BRISC complex subunit Abro1 pseudogene NW_004955446 7660056 7661294 - 102005318 AGCD01040126 MODEL 39134080 misc_rna 7SK 7SK RNA 8855665 protein-coding LOC102019724 olfactory receptor 1052-like NW_004955511 1381697 1382632 - 102019724 AGCD01066366;XM_005408171 XP_005408228 MODEL 8969679 protein-coding Irf8 interferon regulatory factor 8 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); Behcet's disease (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955541 973004 988493 + 102020714 AGCD01071367;GBDF01090291;XM_005410985;XM_013507991 XP_005411042;XP_013363445 MODEL 8709157 protein-coding Asxl2 ASXL transcriptional regulator 2 ENCODES a protein that exhibits chromatin binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN adult heart development (ortholog); embryonic skeletal system morphogenesis (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Developmental Disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955469 7786030 7923739 - 102007881 AGCD01052432;AGCD01052433;AGCD01052434;AGCD01052435;AGCD01052436;AGCD01052437;AGCD01052438;GBDJ01018939;XM_005400412;XM_005400413;XM_005400414;XM_013522575 XP_005400469;XP_005400470;XP_005400471;XP_013378029 MODEL 9009185 protein-coding LOC102022512 EKC/KEOPS complex subunit LAGE3-like NW_004955498 2623974 2625284 + 102022512 AGCD01062813;GBDF01081721;XM_005406401 XP_005406458 MODEL 8808267 protein-coding LOC102015113 dipeptidase 3 NW_004955484 8736208 8740848 + 102015113 AGCD01058396;GBDF01003211;XM_005403593 XP_005403650 MODEL 9035162 protein-coding Wdr74 WD repeat domain 74 INVOLVED IN blastocyst formation (ortholog); ribosomal large subunit biogenesis (ortholog); RNA metabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); disease of cellular proliferation (ortholog); melanoma (ortholog); FOUND IN nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955599 408076 413770 + 102005655 AGCD01076646;GBCE01053828;XM_005414759;XM_005414760 XP_005414816;XP_005414817 MODEL 8915087 protein-coding Dnajc28 DnaJ heat shock protein family (Hsp40) member C28 NW_004955407 32928655 32931331 - 102021731 AGCD01007688;AGCD01007689;GBDF01160900;XM_005375686 XP_005375743 MODEL 8857895 ncrna LOC102020014 uncharacterized LOC102020014 NW_004955486 7288787 7290600 - 102020014 AGCD01059128;GBDF01223577;XR_263959 MODEL 8753865 pseudo LOC102003588 60S ribosomal protein L37 pseudogene NW_004955440 16839141 16839617 + 102003588 AGCD01036533 MODEL 8775089 protein-coding Cbarp CACN subunit beta associated regulatory protein ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport (ortholog); negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of voltage-gated calcium channel activity (ortholog); FOUND IN growth cone (ortholog); plasma membrane (ortholog); secretory granule (ortholog) NW_004955495 6671719 6678338 + 102010500 AGCD01062088;GBDF01261682;GBDF01261683;XM_005405990 XP_005406047 MODEL 8817169 protein-coding Ttyh2 tweety family member 2 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); volume-sensitive anion channel activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) NW_004955553 1137762 1179195 + 102005973 AGCD01072871;GBDF01088643;XM_005412225 XP_005412282 MODEL 8936107 protein-coding Timm29 translocase of inner mitochondrial membrane 29 ENCODES a protein that exhibits protein transporter activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955495 2005929 2007238 + 102028873 AGCD01061744;AGCD01061745;GBCE01024245;GBCE01024246;XM_013505174 XP_013360628 MODEL 8701990 protein-coding Ece1 endothelin converting enzyme 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis involved in innervation (ortholog); blood vessel diameter maintenance (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); autonomic nervous system disease (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); external side of plasma membrane (ortholog) NW_004955452 1653783 1704619 - 102028052 AGCD01043860;GBBH01031129;GBDI01008837;XM_005394714 XP_005394771 MODEL 9048669 protein-coding Alox5 arachidonate 5-lipoxygenase ENCODES a protein that exhibits arachidonate 5-lipoxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN dendritic cell migration (ortholog); glucose homeostasis (ortholog); humoral immune response (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955546 2495226 2550909 + 102016101 AGCD01072095;AGCD01072096;AGCD01072097;GBDK01320072;XM_005411792;XM_005411793 XP_005411849;XP_005411850 MODEL 8912261 protein-coding Tsga10ip testis specific 10 interacting protein NW_004955422 19372072 19389144 - 102022710 AGCD01023002;AGCD01023003;AGCD01023004;AGCD01023005;GBDF01008093;XM_005384439 XP_005384496 MODEL 8813050 protein-coding Bbof1 basal body orientation factor 1 INVOLVED IN cilium movement involved in cell motility (ortholog); flagellated sperm motility (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN axoneme (ortholog); sperm flagellum (ortholog) NW_004955523 1363246 1405022 - 102020275 AGCD01068514;AGCD01068515;AGCD01068516;GBBH01032015;GBDF01084330;XM_005409398;XM_005409399;XM_005409400;XM_013507127 XP_005409455;XP_005409456;XP_005409457;XP_013362581 MODEL 9057865 protein-coding Aqp7 aquaporin 7 ENCODES a protein that exhibits glycerol channel activity (ortholog); urea channel activity (ortholog); urea transmembrane transporter activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); renal water absorption (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH colitis (ortholog); Crohn's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN brush border membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955472 2283426 2297251 + 102008526 AGCD01053451;AGCD01053452;AGCD01053453;GBDI01353209;XM_005401099;XM_005401100;XM_005401101;XM_005401102;XM_005401103;XM_013522949;XM_013522950 XP_005401156;XP_005401157;XP_005401158;XP_005401159;XP_005401160;XP_013378403;XP_013378404 MODEL 8873020 protein-coding Bmp15 bone morphogenetic protein 15 INVOLVED IN ovarian cumulus expansion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955543 2304112 2345376 + 102018029 AGCD01071649;AGCD01071650;GBCE01042542;XM_005411357;XM_005411359;XM_005411360;XM_013508137;XM_013508138;XM_013508139;XM_013508140 XP_005411414;XP_005411416;XP_005411417;XP_013363591;XP_013363592;XP_013363593;XP_013363594 MODEL 8833182 protein-coding LOC102017398 myeloid cell surface antigen CD33-like NW_004955558 1182513 1194080 - 102017398 AGCD01073421;AGCD01073422;GBDJ01201554;XM_005412700;XM_013508896 XP_005412757;XP_013364350 MODEL 10255991 ncrna LOC106147141 uncharacterized LOC106147141 NW_004955522 3864605 3866339 + 106147141 AGCD01068402;GBDF01008457;XR_001231904 MODEL 8714527 ncrna LOC102007111 uncharacterized LOC102007111 NW_004955415 1538810 1543595 + 102007111 AGCD01015868;GBDF01258856;XR_260258 MODEL 8957778 trna Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978829 AGCD01005333;AGCD01005375;AGCD01023470;AGCD01049456;AGCD01050593;AGCD01051466;AGCD01057309 MODEL 8791414 pseudo LOC102021516 chromodomain Y-like protein pseudogene NW_004955405 15378726 15379619 + 102021516 AGCD01004944 MODEL 8831559 protein-coding Flacc1 flagellum associated containing coiled-coil domains 1 ASSOCIATED WITH anthracosis (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); outer dense fiber (ortholog) NW_004955403 264969 321370 + 102021407 AGCD01001685;AGCD01001686;AGCD01001687;AGCD01001688;GBDK01061068;XM_005373202;XM_013511720;XM_013511724;XM_013511729 XP_005373259;XP_013367174;XP_013367178;XP_013367183 MODEL 8984867 protein-coding Gpm6a glycoprotein M6A ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN neural retina development (ortholog); neuron migration (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN axonal growth cone (ortholog); filopodium (ortholog); glutamatergic synapse (ortholog) NW_004955403 31704540 31997382 + 102018878 AGCD01002423;AGCD01002424;GBDK01190623;XM_005373524;XM_005373525 XP_005373581;XP_005373582 MODEL 8814673 pseudo LOC102024197 60 kDa heat shock protein, mitochondrial pseudogene NW_004955410 27911219 27913074 + 102024197 AGCD01011228 MODEL 39132388 snrna U6 U6 spliceosomal RNA 8879595 protein-coding Atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 ENCODES a protein that exhibits protein-containing complex stabilizing activity (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955464 11659761 11682651 + 102014431 AGCD01050160;GBDF01001378;XM_005398657;XM_005398659;XM_005398660;XM_005398661;XM_005398662;XM_005398663;XM_013521633;XR_001236686 XP_005398714;XP_005398716;XP_005398717;XP_005398718;XP_005398719;XP_005398720;XP_013377087 MODEL 39133809 misc_rna 7SK 7SK RNA 9032987 ncrna LOC102010099 uncharacterized LOC102010099 NW_004955558 861760 862614 + 102010099 AGCD01073396;GBDJ01283073;XR_001232330 MODEL 8999884 protein-coding Ago3 argonaute RISC catalytic component 3 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); endoribonuclease activity, cleaving miRNA-paired mRNA (ortholog); miRNA binding (ortholog); INVOLVED IN miRNA processing (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN condensed nuclear chromosome (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955452 13977487 14108729 + 102024642 AGCD01044446;AGCD01044447;AGCD01044448;AGCD01044449;AGCD01044450;GBDJ01416321;XM_005395164;XM_013519526;XM_013519527;XM_013519528;XM_013519529;XM_013519530;XR_262685 XP_005395221;XP_013374980;XP_013374981;XP_013374982;XP_013374983;XP_013374984 MODEL 8851579 protein-coding Hes2 hes family bHLH transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog) NW_004955486 6158863 6161289 + 102011549 AGCD01059109;GBDF01224950;XM_005404093;XM_005404094;XM_005404095 XP_005404150;XP_005404151;XP_005404152 MODEL 39131397 protein-coding PDX1 pancreatic and duodenal homeobox 1 39134081 misc_rna 7SK 7SK RNA 8734447 protein-coding LOC102019732 transmembrane protein 217 NW_004955437 5919268 5920806 + 102019732 AGCD01034405;GBDF01011016;XM_013517044 XP_013372498 MODEL 8838001 protein-coding Homer2 homer scaffold protein 2 ENCODES a protein that exhibits actin binding (ortholog); G protein-coupled glutamate receptor binding (ortholog); glutamate receptor binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); calcium-mediated signaling (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 68 (ortholog); cocaine abuse (ortholog); cocaine dependence (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 13671115 13828413 + 102006126 AGCD01017231;AGCD01017232;AGCD01017233;AGCD01017234;XM_005381473;XM_013512490;XM_013512491;XM_013512492;XM_013512493;XM_013512494 XP_005381530;XP_013367944;XP_013367945;XP_013367946;XP_013367947;XP_013367948 MODEL 8769915 protein-coding Adap2 ArfGAP with dual PH domains 2 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN heart development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial envelope (ortholog); plasma membrane (ortholog) NW_004955481 7068217 7094946 + 102022817 AGCD01057052;AGCD01057053;GBCE01023889;GBDJ01233818;XM_013503464 XP_013358918 MODEL 9028373 protein-coding Rgma repulsive guidance molecule BMP co-receptor a ENCODES a protein that exhibits coreceptor activity (ortholog); signaling receptor binding (ortholog); transferrin receptor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of collateral sprouting (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH middle cerebral artery infarction (ortholog); multiple sclerosis (ortholog); Penetrating Eye Injuries (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955416 21221023 21261831 - 102019388 AGCD01017498;AGCD01017499;AGCD01017500;GBCB01024629;GBDI01174076;XM_005381602 XP_005381659 MODEL 8789286 pseudo LOC102012529 nicotinamide phosphoribosyltransferase-like NW_004955414 15004805 15007553 + 102012529 AGCD01015167 MODEL 9052884 ncrna LOC102015116 uncharacterized LOC102015116 NW_004955486 3132448 3142983 + 102015116 AGCD01059018;GBDI01107855;XR_263945 MODEL 8827655 protein-coding Traf2 TNF receptor associated factor 2 ENCODES a protein that exhibits CD40 receptor binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN CD27 signaling pathway (ortholog); CD40 signaling pathway (ortholog); cellular response to nitric oxide (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ceramide signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); Transplant Rejection (ortholog); FOUND IN CD40 receptor complex (ortholog); cell cortex (ortholog); cytoplasm (ortholog) NW_004955513 4964692 4984359 + 102025152 AGCD01066949;GBCE01188361;XM_013506639;XM_013506640 XP_013362093;XP_013362094 MODEL 39131592 rrna 5S_rRNA 5S ribosomal RNA 9058739 protein-coding LOC102018147 ectonucleoside triphosphate diphosphohydrolase 6-like NW_004955847 889 15804 - 102018147 AGCD01078483;GBCE01185994;GBCE01186006;XM_005415131;XM_005415132;XM_005415133;XM_005415134;XM_013510199 XP_005415188;XP_005415189;XP_005415190;XP_005415191;XP_013365653 MODEL 8897517 protein-coding Ptp4a1 protein tyrosine phosphatase 4A1 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955502 322827 329226 - 102023377 AGCD01064234;GBDK01070331;XM_005406875 XP_005406932 MODEL 9010891 protein-coding Wdr75 WD repeat domain 75 INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); ribosomal small subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955403 9352615 9383206 - 102008367 AGCD01001905;GBDJ01219698;XM_005373322 XP_005373379 MODEL 39134392 misc_rna 7SK 7SK RNA 9006037 protein-coding LOC102003590 olfactory receptor 1361-like NW_004955442 14147658 14149906 - 102003590 AGCD01037802;XM_013517700 XP_013373154 MODEL 8708315 protein-coding LOC102006058 olfactory receptor 5D16-like NW_004955511 662118 663074 + 102006058 AGCD01066337;XM_005408204 XP_005408261 MODEL 8830887 protein-coding Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 ENCODES a protein that exhibits misfolded protein binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN cellular response to cold (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation (ortholog); ASSOCIATED WITH Combined Cerebellar and Peripheral Ataxia with Hearing Loss and Diabetes Mellitus (ortholog); genetic disease (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955404 14361540 14412533 - 102023103 AGCD01003509;GBCC01009571;XM_005374098 XP_005374155 MODEL 8787777 gene LOC102010877 T-cell receptor alpha chain V region HPB-MLT-like NW_004955409 38439384 38453331 - 102010877 AGCD01010560;XR_259812 MODEL 10154739 ncrna LOC106150112 uncharacterized LOC106150112 NW_004955406 25324493 25342379 - 106150112 AGCD01006229;XR_001236731 MODEL 8776302 protein-coding Plekhm2 pleckstrin homology and RUN domain containing M2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN Golgi organization (ortholog); lysosome localization (ortholog); natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955527 2438595 2453120 - 102010404 AGCD01069436;GBCE01096844;GBDJ01072717;XM_013507397 XP_013362851 MODEL 8979645 protein-coding Chic1 cysteine rich hydrophobic domain 1 ASSOCIATED WITH COVID-19 (ortholog); prostate cancer (ortholog) NW_004955591 581415 659840 + 102029575 AGCD01076275;AGCD01076276;AGCD01076277;GBDF01066444;XM_005414595;XM_005414596;XM_005414597 XP_005414652;XP_005414653;XP_005414654 MODEL 39132159 rrna 5S_rRNA 5S ribosomal RNA 8904755 protein-coding LOC102022513 melanoma-associated antigen 10-like NW_004955498 4139854 4140936 - 102022513 AGCD01062973;XM_013505525 XP_013360979 MODEL 8987757 protein-coding Timm44 translocase of inner mitochondrial membrane 44 ENCODES a protein that exhibits enzyme binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); intracellular protein transport (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH diabetic retinopathy (ortholog); Experimental Diabetes Mellitus (ortholog); Neointima (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955563 1328374 1342011 + 102018138 AGCD01074140;AGCD01074141;GBDJ01080690;XM_005413138 XP_005413195 MODEL 8861739 protein-coding Alox5ap arachidonate 5-lipoxygenase activating protein ENCODES a protein that exhibits arachidonate 5-lipoxygenase activity (ortholog); arachidonate binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); leukotriene biosynthetic process (ortholog); leukotriene production involved in inflammatory response (ortholog); PARTICIPATES IN leukotriene metabolic pathway; lipoxygenase mediated pathway of arachidonic acid metabolism; ASSOCIATED WITH arteriosclerosis (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955431 15071535 15097496 - 102019834 AGCD01030345;GBDI01216308;XM_005387741;XM_013515900 XP_005387798;XP_013371354 MODEL 8760855 protein-coding Gfod2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 INVOLVED IN extracellular matrix organization (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955484 8963297 9009791 + 102024571 AGCD01058401;AGCD01058402;AGCD01058403;GBDF01080362;XM_005403626;XM_013503954 XP_005403683;XP_013359408 MODEL 39132716 snrna U4 U4 spliceosomal RNA 8927726 protein-coding Ago4 argonaute RISC component 4 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); miRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN male gonad development (ortholog); male meiotic nuclear division (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog) NW_004955452 13882416 13922590 + 102023551 AGCD01044442;AGCD01044443;GBBH01187718;GBBH01187721;XM_013519611 XP_013375065 MODEL 8789255 protein-coding Irf9 interferon regulatory factor 9 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH acute pancreatitis (ortholog); Experimental Colitis (ortholog); familial hyperlipidemia (ortholog); FOUND IN cytosol (ortholog) NW_004955409 36233633 36239916 - 102011183 AGCD01010453;AGCD01010454;GBCQ01062904;XM_005377043 XP_005377100 MODEL 8759222 pseudo LOC102017400 dnaJ homolog subfamily B member 6-like NW_004955446 3345256 3346492 + 102017400 AGCD01040010 MODEL 8924655 protein-coding Bmp2 bone morphogenetic protein 2 ENCODES a protein that exhibits BMP receptor binding (ortholog); co-receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve development (ortholog); atrioventricular canal morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH atrial heart septal defect 1 (ortholog); bone disease (ortholog); Bone Fractures (ortholog); FOUND IN BMP receptor complex (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955415 17048374 17058172 + 102018921 AGCD01016408;XM_005380857 XP_005380914 MODEL 39131924 snrna U1 U1 spliceosomal RNA 8812304 protein-coding LOC102021518 dimethylaniline monooxygenase [N-oxide-forming] 3 NW_004955406 11764264 11781996 + 102021518 AGCD01005895;AGCD01005896;GBBH01063317;XM_005374830 XP_005374887 MODEL 8700315 protein-coding Sfrp2 secreted frizzled related protein 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme activator activity (ortholog); fibronectin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); apoptotic process (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); inflammatory bowel disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) NW_004955471 8103937 8112596 - 102006653 AGCD01053178;AGCD01053179;GBBH01060570;GBDJ01000856;XM_005400928 XP_005400985 MODEL 39132389 snrna U6 U6 spliceosomal RNA 39133810 misc_rna 7SK 7SK RNA 8850169 protein-coding Kirrel1 kirre like nephrin family adhesion molecule 1 ENCODES a protein that exhibits myosin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-cell junction maintenance (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH nephrotic syndrome type 23 (ortholog); FOUND IN cell projection membrane (ortholog); cell-cell junction (ortholog); dendritic shaft (ortholog) NW_004955468 9820649 9919958 + 102020646 AGCD01052060;AGCD01052061;AGCD01052062;GBCE01154497;XM_005400135;XM_013522482;XM_013522483 XP_005400192;XP_013377936;XP_013377937 MODEL 8903326 protein-coding LOC102005320 UDP-glucuronosyltransferase 2B17-like NW_004955447 3893198 3953572 + 102005320 AGCD01040684;AGCD01040685;AGCD01040686;AGCD01040687;AGCD01040688;AGCD01040689;AGCD01040690;GBDJ01074833;XM_005392811;XM_013518530 XP_005392868;XP_013373984 MODEL 8781707 protein-coding Atpaf2 ATP synthase mitochondrial F1 complex assembly factor 2 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH microcephaly (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) NW_004955478 11249073 11264249 + 102023589 AGCD01056165;GBDJ01186302;XM_005402289 XP_005402346 MODEL 8925307 protein-coding Aqp8 aquaporin 8 ENCODES a protein that exhibits ammonium channel activity (ortholog); methylammonium channel activity (ortholog); urea channel activity (ortholog); INVOLVED IN ammonium import across plasma membrane (ortholog); ammonium transmembrane transport (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH brain ischemia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955493 3550697 3558875 + 102003458 AGCD01061001;GBDF01047526;XM_005405129 XP_005405186 MODEL 39133811 misc_rna 7SK 7SK RNA 8806987 protein-coding Asxl3 ASXL transcriptional regulator 3 INVOLVED IN negative regulation of lipid biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Bainbridge-Ropers syndrome (ortholog); Developmental Disabilities (ortholog) NW_004955402 20571209 20704480 + 102024293 AGCD01000578;AGCD01000579;GBDF01014157;XM_005372763;XM_005372764;XM_005372765;XM_013507996;XM_013508021 XP_005372820;XP_005372821;XP_005372822;XP_013363450;XP_013363475 MODEL 9020649 ncrna LOC102007113 uncharacterized LOC102007113 NW_004955415 15209941 15253124 + 102007113 AGCD01016333;AGCD01016334;AGCD01016335;GBDK01120163;XR_001233186 MODEL 8794251 ncrna LOC102019733 uncharacterized LOC102019733 NW_004955437 13881006 13883816 + 102019733 AGCD01034665;GBDF01112877;XR_261880 MODEL 8993925 trna Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955418;NW_004955445;NW_004955465 63038;29926685;16045097;13921469 63109;29926756;16045169;13921540 -;+;+;+ 101978831 AGCD01019491;AGCD01039863;AGCD01050636;AGCD01074502 MODEL 9019446 protein-coding Flad1 flavin adenine dinucleotide synthetase 1 ENCODES a protein that exhibits FMN adenylyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN FAD biosynthetic process (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); multiple acyl-CoA dehydrogenase deficiency (ortholog); Myopathy with Abnormal Lipid Metabolism (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955545 1487929 1495808 + 102017387 AGCD01071856;AGCD01071857;GBDF01155147;XM_005411537;XM_005411538;XM_013508294 XP_005411594;XP_005411595;XP_013363748 MODEL 8820867 protein-coding Homer3 homer scaffold protein 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of interleukin-2 production (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Keratoconus 5 (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN basal part of cell (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955524 2754970 2760198 + 102004513 AGCD01068834;GBDK01051300;XM_005409602;XM_005409603 XP_005409659;XP_005409660 MODEL 8904505 protein-coding Fancf FA complementation group F ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); ovarian follicle development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH adenocarcinoma in situ (ortholog); breast cancer (ortholog); disease of cellular proliferation (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) NW_004955476 3067491 3069637 - 102006769 AGCD01055236;AGCD01055237;GBCE01072464;XM_013502919 XP_013358373 MODEL 39133485 snrna U4 U4 spliceosomal RNA 39131593 rrna 5S_rRNA 5S ribosomal RNA 8790732 pseudo LOC102018148 fructose-bisphosphate aldolase A pseudogene NW_004955403 51024231 51025067 - 102018148 AGCD01002985 MODEL 8741994 protein-coding Traf3 TNF receptor associated factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN obsolete negative regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of type I interferon production (ortholog); regulation of cytokine production (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Ependymomas (ortholog); Herpes Simplex Encephalitis (ortholog); immunodeficiency 132A (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasmic side of plasma membrane (ortholog); endosome (ortholog) NW_004955538 1954152 2013367 + 102004116 AGCD01071093;GBBH01188734;XM_005410757;XM_005410759;XM_005410760;XM_005410761;XM_005410762;XM_013507875;XM_013507877 XP_005410814;XP_005410816;XP_005410817;XP_005410818;XP_005410819;XP_013363329;XP_013363331 MODEL 9017910 pseudo LOC102003591 etoposide-induced protein 2.4 homolog pseudogene NW_004955442 5873690 5874760 - 102003591 AGCD01037571 MODEL 9018562 protein-coding Bmp2k BMP2 inducible kinase ENCODES a protein that exhibits phosphatase regulator activity (ortholog); protein kinase activity (ortholog); INVOLVED IN regulation of bone mineralization (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955433 3207512 3327688 + 102007147 AGCD01031417;AGCD01031418;AGCD01031419;AGCD01031420;GBDF01286250;XM_013516102 XP_013371556 MODEL 8780668 ncrna LOC102006062 uncharacterized LOC102006062 NW_004955432 9620240 9642499 + 102006062 AGCD01030909;XR_261520 MODEL 8751103 protein-coding Bbox1 gamma-butyrobetaine hydroxylase 1 ENCODES a protein that exhibits gamma-butyrobetaine dioxygenase activity (ortholog); identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN carnitine biosynthetic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) NW_004955476 6368842 6433797 + 102015106 AGCD01055330;AGCD01055331;GBBH01127279;XM_005401746;XM_005401747;XM_013502996 XP_005401803;XP_005401804;XP_013358450 MODEL 39134082 misc_rna 7SK 7SK RNA 8718506 pseudo LOC102010880 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial pseudogene NW_004955410 29866734 29868389 - 102010880 AGCD01011297 MODEL 10136577 protein-coding LOC106150113 vomeronasal type-1 receptor 4-like NW_004955465 12873080 12873832 - 106150113 AGCD01050566;AGCD01050567;XM_013521781 XP_013377235 MODEL 10269422 ncrna LOC106147142 uncharacterized LOC106147142 NW_004955522 3219986 3224438 + 106147142 AGCD01068381;GBDF01157855;XR_001231906 MODEL 8739191 pseudo LOC102024199 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955464 4129161 4130292 + 102024199 AGCD01049984 MODEL 8958932 protein-coding Rgmb repulsive guidance molecule BMP co-receptor b ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell adhesion (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); plasma membrane (ortholog) NW_004955418 14305634 14321804 - 102027979 AGCD01019071;GBCE01044704;GBDK01009283;XM_013513020 XP_013368474 MODEL 8962215 protein-coding Gpm6b glycoprotein M6B INVOLVED IN extracellular matrix assembly (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of serotonin uptake (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) NW_004955519 4287203 4432188 + 102021792 AGCD01067981;AGCD01067982;GBCE01135500;XM_005409191;XM_005409192;XM_005409194;XM_005409195;XM_013506990;XM_013506991 XP_005409248;XP_005409249;XP_005409251;XP_005409252;XP_013362444;XP_013362445 MODEL 9025248 pseudo LOC102012538 peroxiredoxin-6-like NW_004955482 9359566 9361203 + 102012538 AGCD01057566 MODEL 8793608 protein-coding Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ENCODES a protein that exhibits amino acid binding (ortholog); carbohydrate binding (ortholog); glutamine-fructose-6-phosphate transaminase (isomerizing) activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); circadian regulation of gene expression (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 12 (ortholog); congenital myasthenic syndrome 4C (ortholog) NW_004955424 15692088 15739894 + 102025483 AGCD01024723;AGCD01024724;AGCD01024725;GBDF01267390;XM_013514590 XP_013370044 MODEL 8958915 protein-coding Cbfa2t2 CBFA2/RUNX1 partner transcriptional co-repressor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); intestinal epithelial cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) NW_004955422 27671215 27809384 - 102027869 AGCD01023331;AGCD01023332;AGCD01023333;AGCD01023334;AGCD01023335;GBCB01131430;XM_005384841;XM_005384842;XM_013514210 XP_005384898;XP_005384899;XP_013369664 MODEL 8774565 ncrna LOC102015119 uncharacterized LOC102015119 NW_004955422 11663140 11693220 - 102015119 AGCD01022765;GBDJ01194024;XR_001234030;XR_001234031;XR_001234032;XR_260865 MODEL 8968893 protein-coding Ttyh3 tweety family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); L-glutamate transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 12736086 12766907 + 102014219 AGCD01048663;AGCD01048664;GBDF01080224;GBDI01137898;XM_005397872;XM_005397873 XP_005397929;XP_005397930 MODEL 39134393 misc_rna 7SK 7SK RNA 8700369 protein-coding Tsga13 testis specific 13 NW_004955410 36964398 36982042 + 102009259 AGCD01011441;AGCD01011442;GBDF01010268;XM_005377551;XM_005377552;XM_005377553;XM_013510641 XP_005377608;XP_005377609;XP_005377610;XP_013366095 MODEL 8777141 protein-coding Ptp4a2 protein tyrosine phosphatase 4A2 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955452 10293958 10331868 - 102013578 AGCD01044271;AGCD01044272;AGCD01044273;GBDI01068104;XM_005395037 XP_005395094 MODEL 8712354 protein-coding Ece2 endothelin converting enzyme 2 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN peptide hormone processing (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) NW_004955420 23199627 23217078 - 102024685 AGCD01021233;GBDF01270605;XM_005383341;XM_013513360 XP_005383398;XP_013368814 MODEL 8708424 protein-coding Wdr76 WD repeat domain 76 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN heterochromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955416 10280112 10337963 + 102015196 AGCD01017129;AGCD01017130;AGCD01017131;AGCD01017132;AGCD01017133;AGCD01017134;AGCD01017135;GBDF01163138;XM_005381415;XM_013512615;XM_013512616;XM_013512617 XP_005381472;XP_013368069;XP_013368070;XP_013368071 MODEL 8727212 protein-coding Pdxdc1 pyridoxal dependent decarboxylase domain containing 1 ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955442 187983 238586 - 102029673 AGCD01037414;AGCD01037415;AGCD01037416;GBBH01063606;GBDJ01382967;XM_005391842 XP_005391899 MODEL 8892161 protein-coding Chic2 cysteine rich hydrophobic domain 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi-associated vesicle (ortholog); plasma membrane (ortholog) NW_004955447 16723598 16805878 + 102010211 AGCD01041101;AGCD01041102;AGCD01041103;AGCD01041104;AGCD01041105;AGCD01041106;AGCD01041107;GBDF01157265;XM_005392900 XP_005392957 MODEL 8827399 protein-coding LOC102020017 FERM and PDZ domain-containing protein 3-like NW_004955490 8400067 8451015 - 102020017 AGCD01060282;AGCD01060283;GBDI01247859;XM_005404701 XP_005404758 MODEL 8931510 protein-coding Plekhm3 pleckstrin homology domain containing M3 INVOLVED IN myoblast differentiation (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955457 7065443 7239663 + 102008701 AGCD01046868;AGCD01046869;AGCD01046870;AGCD01046871;AGCD01046872;AGCD01046873;AGCD01046874;GBBH01021390;XM_005396971;XM_005396973;XM_005396974 XP_005397028;XP_005397030;XP_005397031 MODEL 8914392 protein-coding Traf3ip1 TRAF3 interacting protein 1 INVOLVED IN cilium assembly (ortholog); embryonic camera-type eye development (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); Ellis-Van Creveld syndrome (ortholog); genetic disease (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955542 2264472 2301083 - 102024052 AGCD01071516;AGCD01071517;GBDJ01272447;GBDK01234988;XM_005411182 XP_005411239 MODEL 8988857 protein-coding Atpsckmt ATP synthase c subunit lysine N-methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine methylation (ortholog); peptidyl-lysine trimethylation (ortholog); positive regulation of proton-transporting ATP synthase activity, rotational mechanism (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrion (ortholog) NW_004955426 116223 131798 - 102029535 AGCD01025996;GBDF01145448;XM_005386109;XM_005386111;XM_013514990 XP_005386166;XP_005386168;XP_013370444 MODEL 8714840 protein-coding Timm50 translocase of inner mitochondrial membrane 50 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity (ortholog); interleukin-2 receptor binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN mitochondrial membrane organization (ortholog); protein dephosphorylation (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH 3-methylglutaconic aciduria type 9 (ortholog); genetic disease (ortholog); Mitochondrial Encephalopathy (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); mitochondrial inner membrane (ortholog) NW_004955468 85681 94300 - 102020644 AGCD01051681;GBDF01010510;XM_005399767 XP_005399824 MODEL 8893968 protein-coding Irgc immunity related GTPase cinema INVOLVED IN positive regulation of flagellated sperm motility (ortholog); FOUND IN lipid droplet (ortholog); sperm flagellum (ortholog); sperm mitochondrial sheath (ortholog) NW_004955555 1442188 1445305 + 102019857 AGCD01073081;XM_005412454 XP_005412511 MODEL 8763629 protein-coding Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN phosphatidic acid biosynthetic process (ortholog); positive regulation of cytokine production (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH exfoliation syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955437 633522 642659 - 102012574 AGCD01034152;GBBH01114504;XM_005389423;XM_005389424;XM_005389425 XP_005389480;XP_005389481;XP_005389482 MODEL 8830929 protein-coding Aloxe3 arachidonate epidermal lipoxygenase 3 ENCODES a protein that exhibits hydroperoxy icosatetraenoate isomerase activity (ortholog); intramolecular hydroxytransferase activity (ortholog); oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); bicellular tight junction assembly (ortholog); ceramide biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog) NW_004955467 8844805 8869230 + 102025105 AGCD01051475;AGCD01051476;AGCD01051477;GBCC01051993;XM_005399436 XP_005399493 MODEL 8790007 protein-coding Aqp9 aquaporin 9 ENCODES a protein that exhibits channel activity (ortholog); glycerol channel activity (ortholog); hydrogen peroxide channel activity (ortholog); INVOLVED IN amine transport (ortholog); canalicular bile acid transport (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Arsenic Poisoning (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955450 16253706 16346602 - 102017410 AGCD01042834;AGCD01042835;AGCD01042836;AGCD01042837;AGCD01042838;AGCD01042839;AGCD01042840;GBDF01044252;XM_005393841;XM_005393842;XM_005393843;XM_013518820 XP_005393898;XP_005393899;XP_005393900;XP_013374274 MODEL 8701315 ncrna LOC102017401 uncharacterized LOC102017401 NW_004955447 9620021 9623327 + 102017401 AGCD01040865;GBDF01045016;XR_001235711;XR_262416;XR_262417 MODEL 8911962 pseudo LOC102010100 putative homeodomain transcription factor 2 pseudogene NW_004955442 14465591 14468091 + 102010100 AGCD01037821 MODEL 8999630 protein-coding Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); transposable element silencing (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); spermatogenic failure 57 (ortholog); FOUND IN cytoplasm (ortholog); pi-body (ortholog) NW_004955432 23059462 23119421 - 102016186 AGCD01031274;AGCD01031275;AGCD01031276;GBDF01222043;XM_005388135 XP_005388192 MODEL 8830860 pseudo LOC102021519 purine nucleoside phosphorylase pseudogene NW_004955406 14154246 14154836 - 102021519 AGCD01005958 MODEL 39131925 snrna U1 U1 spliceosomal RNA 39132390 snrna U6 U6 spliceosomal RNA 39133486 snrna U4 U4 spliceosomal RNA 8768987 protein-coding Hes3 hes family bHLH transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN hindbrain morphogenesis (ortholog); in utero embryonic development (ortholog); midbrain development (ortholog) NW_004955486 6272757 6273721 - 102013090 AGCD01059117;XM_005404098 XP_005404155 MODEL 8757659 protein-coding Flcn folliculin ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell-cell junction assembly (ortholog); cellular response to amino acid starvation (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Birt-Hogg-Dube syndrome (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); colon carcinoma (ortholog); FOUND IN cell-cell contact zone (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955577 672774 694140 + 102019651 AGCD01075409;AGCD01075410;GBCE01099409;XM_005413976;XM_005413977;XM_005413978 XP_005414033;XP_005414034;XP_005414035 MODEL 8706978 protein-coding Sfrp4 secreted frizzled related protein 4 ENCODES a protein that exhibits Wnt-protein binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); decidualization (ortholog); female pregnancy (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Experimental Arthritis (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955460 5654187 5666475 + 102026611 AGCD01048456;GBDJ01005445;XM_005397748 XP_005397805 MODEL 39132163 rrna 5S_rRNA 5S ribosomal RNA 8744015 ncrna LOC102005321 uncharacterized LOC102005321 NW_004955575 1196092 1210167 + 102005321 AGCD01075234;GBDF01148249;XR_265071 MODEL 39134394 misc_rna 7SK 7SK RNA 8745120 ncrna LOC102022516 uncharacterized LOC102022516 NW_004955425 24875518 24899720 - 102022516 AGCD01025896;AGCD01025897;AGCD01025898;GBDF01146023;XR_261169 MODEL 9050992 protein-coding Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN granulocyte differentiation (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955541 2724369 2777540 - 102006822 AGCD01071423;AGCD01071424;GBDK01281937;XM_005411026;XM_005411029;XM_005411030;XM_013508004;XM_013508006 XP_005411083;XP_005411086;XP_005411087;XP_013363458;XP_013363460 MODEL 39133812 misc_rna 7SK 7SK RNA 8810394 ncrna LOC102007114 uncharacterized LOC102007114 NW_004955476 1399542 1400885 - 102007114 AGCD01055205;GBDF01224897;XR_001230779 MODEL 39134083 misc_rna 7SK 7SK RNA 9049329 ncrna LOC102019734 uncharacterized LOC102019734 NW_004955541 878508 883934 - 102019734 AGCD01071363;GBDF01003819;XR_264831 MODEL 8699520 trna Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955518;NW_004955533;NW_004955404;NW_004955468;NW_004955467 2739880;3278389;51044487;13117506;8514521 2739951;3278460;51044558;13117577;8514592 -;+;-;+;+ 101978830 AGCD01004542;AGCD01051452;AGCD01052199;AGCD01067784;AGCD01070411 MODEL 39133813 misc_rna 7SK 7SK RNA 8890108 protein-coding Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 INVOLVED IN brain development (ortholog); regulation of mitochondrial ATP synthesis coupled proton transport (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); Leber Optic Atrophy, Susceptibility To (ortholog); Nuclear Type Mitochondrial Complex I Deficiency 38 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955456 14057517 14058729 + 102024307 AGCD01046632;GBDF01180175;XM_005396770 XP_005396827 MODEL 9021339 protein-coding Fancg FA complementation group G INVOLVED IN DNA damage response (ortholog); mitochondrion organization (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH congenital myopathy 6 (ortholog); Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); mitochondrion (ortholog) NW_004955472 1097986 1105836 + 102015101 AGCD01053373;AGCD01053374;GBDI01026280;XM_005401027;XR_263541 XP_005401084 MODEL 8744261 pseudo LOC102012540 ubiquitin carboxyl-terminal hydrolase 28 pseudogene NW_004955485 2178951 2183590 - 102012540 AGCD01058507;XM_005403918 MODEL 8883652 protein-coding Traf3ip2 TRAF3 interacting protein 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN B cell affinity maturation (ortholog); B cell apoptotic process (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Candidiasis, Familial, 8 (ortholog); psoriasis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); nucleus (ortholog) NW_004955411 36328152 36363614 - 102003742 AGCD01012471;AGCD01012472;GBDK01225046;XM_005377909;XM_013510877 XP_005377966;XP_013366331 MODEL 10379602 protein-coding Homez homeobox and leucine zipper encoding ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 37022482 37040420 + 106146301 AGCD01010488;AGCD01010489;GBBH01158683;XM_013510430;XM_013510431;XM_013510432;XM_013510433;XM_013510434;XM_013510435 XP_013365884;XP_013365885;XP_013365886;XP_013365887;XP_013365888;XP_013365889 MODEL 8867251 protein-coding Adar adenosine deaminase RNA specific ENCODES a protein that exhibits double-stranded RNA adenosine deaminase activity (ortholog); INVOLVED IN adenosine to inosine editing (ortholog); base conversion or substitution editing (ortholog); cellular response to virus (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 6 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) NW_004955545 1078319 1106938 - 102013119 AGCD01071836;AGCD01071837;GBCE01170194;XM_005411521;XM_005411522;XM_005411523;XM_005411524;XM_013508293 XP_005411578;XP_005411579;XP_005411580;XP_005411581;XP_013363747 MODEL 8742857 protein-coding Bmp3 bone morphogenetic protein 3 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN negative regulation of ossification (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Tibial Fractures (ortholog); FOUND IN extracellular space (ortholog); vesicle (ortholog) NW_004955433 5194312 5246125 + 102007805 AGCD01031492;AGCD01031493;GBCE01008766;XM_005388497 XP_005388554 MODEL 8918067 protein-coding Bbs1 Bardet-Biedl syndrome 1 ENCODES a protein that exhibits patched binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); brain morphogenesis (ortholog); cartilage development (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/7, Digenic (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); centrosome (ortholog) NW_004955422 18825756 18843820 - 102009193 AGCD01022962;AGCD01022963;AGCD01022964;GBDF01048179;XM_005384395 XP_005384452 MODEL 8938501 protein-coding Tshb thyroid stimulating hormone subunit beta INVOLVED IN response to calcium ion (ortholog); response to estrogen (ortholog); response to vitamin A (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Coma (ortholog); congenital hypothyroidism (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 18316585 18339935 + 102023390 AGCD01033400;AGCD01033401;AGCD01033402;AGCD01033403;GBDF01010175;XM_005389018;XM_005389019;XM_013516550 XP_005389075;XP_005389076;XP_013372004 MODEL 8817903 ncrna LOC102006066 uncharacterized LOC102006066 NW_004955518 1072445 1103749 + 102006066 AGCD01067755;AGCD01067756;GBDF01079167;XR_264564 MODEL 8874028 pseudo LOC102024200 phosphoglycerate kinase 1-like NW_004955411 34665490 34723313 - 102024200 AGCD01012414;AGCD01012415 MODEL 8790749 ncrna LOC102019735 uncharacterized LOC102019735 NW_004955438 17701064 17708297 - 102019735 AGCD01035450;GBDF01079005;XR_261945 MODEL 8954913 protein-coding Rgn regucalcin ENCODES a protein that exhibits calcium ion binding (ortholog); gluconolactonase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); kidney development (ortholog); L-ascorbic acid biosynthetic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955516 958416 978829 - 102024267 AGCD01067406;AGCD01067407;GBDI01162056;XM_005408970;XM_005408971 XP_005409027;XP_005409028 MODEL 39131594 rrna 5S_rRNA 5S ribosomal RNA 8938922 pseudo LOC102017405 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955592 310823 312866 - 102017405 AGCD01076302 MODEL 8707093 ncrna LOC102003597 uncharacterized LOC102003597 NW_004955447 15301309 15312329 + 102003597 AGCD01041045;GBDF01277712;XR_262434 MODEL 9016780 protein-coding Kirrel2 kirre like nephrin family adhesion molecule 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); negative regulation of protein phosphorylation (ortholog); ASSOCIATED WITH epilepsy (ortholog); nephrotic syndrome type 1 (ortholog); FOUND IN cell-cell junction (ortholog); centriolar satellite (ortholog); plasma membrane (ortholog) NW_004955468 2705131 2712921 - 102016578 AGCD01051834;GBDJ01243401;XM_013522336 XP_013377790 MODEL 8893271 pseudo LOC102021527 olfactory receptor 6C65-like NW_004955458 2783468 2787627 + 102021527 AGCD01047243 MODEL 8982275 pseudo LOC102005322 tubulin beta chain-like NW_004955402 252450 252882 - 102005322 AGCD01000015 MODEL 8836357 protein-coding Ptp4a3 protein tyrosine phosphatase 4A3 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); endothelial cell migration (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955454 429051 440328 + 102015689 AGCD01044958;GBDI01229359;XM_005395723;XM_013520280;XM_013520281;XM_013520282 XP_005395780;XP_013375734;XP_013375735;XP_013375736 MODEL 9013697 protein-coding Wdr77 WD repeat domain 77 ENCODES a protein that exhibits methyl-CpG binding (ortholog); transcription coactivator activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of epithelial cell proliferation involved in prostate gland development (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN Cul4B-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955435 14929202 14940439 - 102027005 AGCD01033258;GBDF01183170;XM_005388949;XM_013516496 XP_005389006;XP_013371950 MODEL 8762173 protein-coding Fli1 Fli-1 proto-oncogene, ETS transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); megakaryocyte development (ortholog); ASSOCIATED WITH Ewing sarcoma (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 29653621 29773412 + 102012178 AGCD01013284;AGCD01013285;AGCD01013286;GBDK01013563;XM_005378532;XM_013511152;XM_013511153 XP_005378589;XP_013366606;XP_013366607 MODEL 10184950 ncrna LOC106147143 uncharacterized LOC106147143 NW_004955522 3333872 3353025 - 106147143 AGCD01068381;GBDF01139727;XR_001231911 MODEL 39134395 misc_rna 7SK 7SK RNA 8918779 protein-coding Pdxk pyridoxal kinase ENCODES a protein that exhibits phosphotransferase activity, alcohol group as acceptor (ortholog); pyridoxal binding (ortholog); pyridoxal kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); pyridoxal phosphate biosynthetic process (ortholog); response to amine (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955407 41482216 41494174 - 102005109 AGCD01007869;GBDJ01073643;GBDK01008497;XM_013505430 XP_013360884 MODEL 8994407 protein-coding LOC102022522 olfactory receptor 5M3-like NW_004955511 1626694 1627645 - 102022522 AGCD01066377;XM_013506375 XP_013361829 MODEL 10315077 ncrna LOC106150114 uncharacterized LOC106150114 NW_004955465 13362975 13367552 + 106150114 AGCD01050604;GBDF01226308;XR_001236733 MODEL 8845698 protein-coding Plekhn1 pleckstrin homology domain containing N1 ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol phosphate binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); positive regulation of apoptotic process (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoskeleton (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955486 9736801 9744659 - 102011126 AGCD01059198;GBDJ01386505;XM_005404287;XM_005404288 XP_005404344;XP_005404345 MODEL 8945726 protein-coding Adarb1 adenosine deaminase RNA specific B1 ENCODES a protein that exhibits adenosine deaminase activity (ortholog); double-stranded RNA adenosine deaminase activity (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN adenosine to inosine editing (ortholog); base conversion or substitution editing (ortholog); facial nerve morphogenesis (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 41886286 41962846 + 102011737 AGCD01007884;GBCE01116963;GBDK01358973;XM_005375908 XP_005375965 MODEL 9018510 protein-coding Chid1 chitinase domain containing 1 ENCODES a protein that exhibits oligosaccharide binding (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); FOUND IN extracellular space (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955476 11246745 11276341 + 102006452 AGCD01055445;AGCD01055446;GBCE01033146;XM_005401799;XM_013502940;XM_013502941;XM_013502942;XM_013502943;XM_013502944;XM_013502945;XM_013502947 XP_005401856;XP_013358394;XP_013358395;XP_013358396;XP_013358397;XP_013358398;XP_013358399;XP_013358401 MODEL 8877832 protein-coding Gpn1 GPN-loop GTPase 1 ENCODES a protein that exhibits GTPase activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH Mouth Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955469 9580068 9602575 + 102008305 AGCD01052510;GBDI01220811;XM_005400514;XM_005400515 XP_005400571;XP_005400572 MODEL 8800798 ncrna LOC102018152 uncharacterized LOC102018152 NW_004955452 7664103 7667411 - 102018152 AGCD01044180;GBDI01004050;XR_262660 MODEL 8846032 protein-coding Timm8a translocase of inner mitochondrial membrane 8A ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); protein localization to mitochondrion (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Animal Disease Models (ortholog); Auditory Neuropathy (ortholog); deafness-dystonia-optic neuronopathy syndrome (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog); mitochondrion (ortholog) NW_004955503 7480075 7483218 - 102025707 AGCD01064794;GBCE01065783;XM_005406950 XP_005407007 MODEL 8759817 protein-coding Irgm immunity related GTPase M ENCODES a protein that exhibits BH3 domain binding (ortholog); CARD domain binding (ortholog); cardiolipin binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); CAMKK-AMPK signaling cascade (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); inflammatory bowel disease (ortholog); inflammatory bowel disease 19 (ortholog); FOUND IN autolysosome (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) NW_004955408 2338510 2344566 + 102014746 AGCD01008006;GBDI01011672;XM_005376048;XM_005376049;XM_005376050;XM_013508143;XM_013508144 XP_005376105;XP_005376106;XP_005376107;XP_013363597;XP_013363598 MODEL 9047385 pseudo LOC102010103 ubiquitin-conjugating enzyme E2 J1 pseudogene NW_004955444 6424523 6426955 - 102010103 AGCD01038865 MODEL 8827259 protein-coding Atr ATR serine/threonine kinase ENCODES a protein that exhibits histone H2AXS139 kinase activity (ortholog); MutLalpha complex binding (ortholog); MutSalpha complex binding (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to UV (ortholog); chromosome organization (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); alpha thalassemia-X-linked intellectual disability syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN ATR-ATRIP complex (ortholog); chromosome (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955508 3337036 3440313 + 102013741 AGCD01065808;AGCD01065809;AGCD01065810;AGCD01065811;GBBH01077775;XM_005407741;XM_013506249 XP_005407798;XP_013361703 MODEL 9024278 protein-coding Alpk1 alpha kinase 1 ENCODES a protein that exhibits monosaccharide binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); innate immune response (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Diabetic Nephropathies (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955457 14325278 14444368 - 102019777 AGCD01047071;AGCD01047072;GBDF01014659;GBDJ01164744;XM_005397100;XM_013520771;XM_013520772 XP_005397157;XP_013376225;XP_013376226 MODEL 8850508 protein-coding Aqr aquarius intron-binding spliceosomal factor ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 2214990 2304924 - 102004161 AGCD01016851;AGCD01016852;AGCD01016853;GBBH01187407;GBCE01117658;XM_013512621 XP_013368075 MODEL 8998028 protein-coding Tub TUB bipartite transcription factor ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); intraciliary transport particle A binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN intraciliary transport (ortholog); phagocytosis, recognition (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); fundus dystrophy (ortholog); obesity (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 23832741 23919697 + 102014553 AGCD01015527;AGCD01015528;AGCD01015529;AGCD01015530;GBDF01276958;XM_005380209;XM_005380210;XM_013512014 XP_005380266;XP_005380267;XP_013367468 MODEL 39131926 snrna U1 U1 spliceosomal RNA 9011433 protein-coding LOC102024203 histone H2A type 2-B FOUND IN nucleoplasm (ortholog) NW_004955413 863965 864451 + 102024203 AGCD01013492;GBBH01014684;XM_005378715 XP_005378772 MODEL 39132391 snrna U6 U6 spliceosomal RNA 8949985 protein-coding Ech1 enoyl-CoA hydratase 1 ASSOCIATED WITH glucose intolerance (ortholog); Insulin Resistance (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955468 686171 692737 + 102009033 AGCD01051725;GBDF01050809;XM_005399829 XP_005399886 MODEL 8824381 protein-coding Atad1 ATPase family AAA domain containing 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN extraction of mislocalized protein from mitochondrial outer membrane (ortholog); learning (ortholog); memory (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH genetic disease (ortholog); hyperekplexia 4 (ortholog); FOUND IN glutamatergic synapse (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955425 5118107 5180578 + 102025703 AGCD01025335;GBDF01002165;XM_005385882;XM_005385883;XM_005385884;XM_005385885;XM_013514805;XM_013514806 XP_005385939;XP_005385940;XP_005385941;XP_005385942;XP_013370259;XP_013370260 MODEL 8847174 pseudo LOC102010891 ras-related protein Rab-43 pseudogene NW_004955413 12621970 12622932 - 102010891 AGCD01013994;XM_005379601 MODEL 8860668 protein-coding Hes5 hes family bHLH transcription factor 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); brain development (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); diabetes mellitus (ortholog); nervous system disease (ortholog) NW_004955486 8700212 8701581 + 102006137 AGCD01059154;GBCQ01054019;XM_005404164 XP_005404221 MODEL 8797851 protein-coding Dnajc4 DnaJ heat shock protein family (Hsp40) member C4 NW_004955422 20843679 20848420 - 102019708 AGCD01023093;AGCD01023094;GBBH01064426;GBCB01038433;XM_005384636;XM_013513960;XM_013513961 XP_005384693;XP_013369414;XP_013369415 MODEL 8726863 pseudo LOC102018153 protein phosphatase 1A pseudogene NW_004955405 7689040 7690265 - 102018153 AGCD01004721 MODEL 8801040 protein-coding Fanci FA complementation group I ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH breast cancer (ortholog); colorectal cancer (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955416 15788812 15857933 - 102003021 AGCD01017343;AGCD01017344;AGCD01017345;AGCD01017346;GBDF01155238;XM_005381555;XM_013512604 XP_005381612;XP_013368058 MODEL 39132164 rrna 5S_rRNA 5S ribosomal RNA 8918931 protein-coding Hook1 hook microtubule tethering protein 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); early endosome to late endosome transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); FHF complex (ortholog); HOPS complex (ortholog) NW_004955464 47895 129414 - 102012412 AGCD01049920;AGCD01049921;AGCD01049922;AGCD01049923;AGCD01049924;AGCD01049925;AGCD01049926;AGCD01049927;GBDI01117530;XM_005398478 XP_005398535 MODEL 8964272 ncrna LOC102020018 uncharacterized LOC102020018 NW_004955491 9008190 9011535 + 102020018 AGCD01060622;GBDF01089337;XR_001231209 MODEL 39134396 misc_rna 7SK 7SK RNA 8924826 trna Trnaf-aaa transfer RNA phenylalanine (anticodon AAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465 13258353 13258434 + 101978786 AGCD01050595 MODEL 8892606 protein-coding Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN epidermis development (ortholog); phosphatidic acid biosynthetic process (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH congenital generalized lipodystrophy (ortholog); congenital generalized lipodystrophy type 1 (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955513 4142074 4145097 + 102025828 AGCD01066922;GBDF01003324;GBDK01007887;XM_013506701 XP_013362155 MODEL 8947233 protein-coding Flii FLII actin remodeling protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN sarcomere organization (ortholog); ASSOCIATED WITH Contracture (ortholog); dilated cardiomyopathy (ortholog); Dilated Cardiomyopathy 2J (ortholog); FOUND IN brush border (ortholog); podosome (ortholog) NW_004955478 11061728 11075370 + 102021340 AGCD01056157;AGCD01056158;GBBH01061469;GBDI01005007;XM_013503179 XP_013358633 MODEL 39133487 snrna U4 U4 spliceosomal RNA 8851084 protein-coding Traf3ip3 TRAF3 interacting protein 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); zf-TRAF domain binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); mitochondrial membrane (ortholog) NW_004955489 2442319 2468683 - 102022708 AGCD01059871;GBBH01229221;XM_005404533;XM_013504476;XM_013504477;XM_013504478;XM_013504479;XM_013504480 XP_005404590;XP_013359930;XP_013359931;XP_013359932;XP_013359933;XP_013359934 MODEL 8792317 protein-coding Sfrp5 secreted frizzled related protein 5 INVOLVED IN convergent extension involved in axis elongation (ortholog); digestive tract morphogenesis (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog) NW_004955507 3836607 3841910 - 102007576 AGCD01065638;GBDI01216661;XM_005407640 XP_005407697 MODEL 8984425 pseudo LOC102007117 pre-mRNA-splicing factor 38A pseudogene NW_004955476 3480571 3481491 - 102007117 AGCD01055252 MODEL 39134084 misc_rna 7SK 7SK RNA 9036935 protein-coding Bbs10 Bardet-Biedl syndrome 10 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); cone retinal bipolar cell differentiation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 10 (ortholog) NW_004955405 15571458 15574568 - 102012725 AGCD01004948;GBDJ01298756;XM_005374342 XP_005374399 MODEL 8799746 ncrna LOC102005323 uncharacterized LOC102005323 NW_004955402 4782171 4812521 - 102005323 AGCD01000126;AGCD01000127;GBDI01204334;XR_001236325;XR_259027 MODEL 8980964 protein-coding Hes6 hes family bHLH transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955542 2373241 2374827 + 102015451 AGCD01071520;AGCD01071521;GBCB01024654;GBCQ01066374;XM_005411246 XP_005411303 MODEL 10175460 protein-coding LOC106147144 uncharacterized LOC106147144 NW_004955523 4315463 4317866 - 106147144 AGCD01068642;GBBH01074619;GBCE01083254;XM_013507113 XP_013362567 MODEL 39132165 rrna 5S_rRNA 5S ribosomal RNA 8779538 pseudo LOC102022523 anaphase-promoting complex subunit 10 pseudogene NW_004955431 2848411 2848968 + 102022523 AGCD01029941;XR_261443 MODEL 39133814 misc_rna 7SK 7SK RNA 8943034 pseudo LOC102019738 60S ribosomal protein L6-like NW_004955439 671623 673110 - 102019738 AGCD01035592 MODEL 9057948 ncrna LOC102012541 uncharacterized LOC102012541 NW_004955420 22215125 22224734 - 102012541 AGCD01021189;GBDJ01422894;XR_260735 MODEL 39134397 misc_rna 7SK 7SK RNA 8812178 protein-coding LOC102017406 basic salivary proline-rich protein 3-like NW_004955402 59976556 59982050 - 102017406 AGCD01001574;GBDF01303658;XM_005373093;XM_005373094;XR_259110 XP_005373150;XP_005373151 MODEL 8799538 protein-coding Timm8b translocase of inner mitochondrial membrane 8 homolog B PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955412 13766532 13768453 - 102026956 AGCD01012845;GBDF01002080;XM_005378108 XP_005378165 MODEL 9032470 protein-coding Cbfb core-binding factor subunit beta ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); definitive hemopoiesis (ortholog); lymphocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); bone development disease (ortholog); FOUND IN nucleus (ortholog) NW_004955484 9503286 9557066 - 102017240 AGCD01058419;AGCD01058420;AGCD01058421;GBCE01074286;GBDI01134269;XM_005403703 XP_005403760 MODEL 8987338 pseudo LOC102024206 serine/Arginine-related protein 53 pseudogene NW_004955468 1620295 1621668 + 102024206 AGCD01051778 MODEL 8899365 protein-coding LOC102021528 probable C-mannosyltransferase DPY19L2 NW_004955460 5077043 5137707 + 102021528 AGCD01048446;AGCD01048447;AGCD01048448;GBDF01005800;XM_013521261;XM_013521262;XM_013521263 XP_013376715;XP_013376716;XP_013376717 MODEL 9010965 protein-coding Kirrel3 kirre like nephrin family adhesion molecule 3 INVOLVED IN glomerulus morphogenesis (ortholog); hemopoiesis (ortholog); hippocampus development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 4 (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic shaft (ortholog) NW_004955412 27428360 27994458 - 102009703 AGCD01013238;AGCD01013239;AGCD01013240;AGCD01013241;AGCD01013242;AGCD01013243;AGCD01013244;AGCD01013245;AGCD01013246;AGCD01013247;GBDJ01264496;XM_005378522;XM_005378523;XM_013511050;XM_013511051 XP_005378579;XP_005378580;XP_013366504;XP_013366505 MODEL 8869635 pseudo LOC102015120 protein phosphatase 1A pseudogene NW_004955423 28444139 28445298 - 102015120 AGCD01024148;XR_261017 MODEL 9017542 protein-coding Echdc1 ethylmalonyl-CoA decarboxylase 1 ENCODES a protein that exhibits carboxy-lyase activity (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); melanoma (ortholog); short chain acyl-CoA dehydrogenase deficiency (ortholog); FOUND IN cytosol (ortholog) NW_004955436 8332066 8365200 - 102008144 AGCD01033737;AGCD01033738;GBCQ01093617;XM_005389168;XM_013516634;XM_013516635 XP_005389225;XP_013372088;XP_013372089 MODEL 8750039 protein-coding Gfpt2 glutamine-fructose-6-phosphate transaminase 2 ENCODES a protein that exhibits glutamine-fructose-6-phosphate transaminase (isomerizing) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); fructose 6-phosphate metabolic process (ortholog); UDP-N-acetylglucosamine biosynthetic process (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); type 2 diabetes mellitus (ortholog) NW_004955408 330112 372413 + 102027271 AGCD01007915;AGCD01007916;AGCD01007917;GBDF01113230;XM_005376003 XP_005376060 MODEL 9049047 protein-coding Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); INVOLVED IN negative regulation of neuron apoptotic process (ortholog); protein folding (ortholog); regulation of synaptic vesicle cycle (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); neuronal ceroid lipofuscinosis (ortholog); FOUND IN neuromuscular junction (ortholog); plasma membrane (ortholog); presynapse (ortholog) NW_004955528 317891 366299 - 102004315 AGCD01069526;GBCB01077693;XM_005409943;XM_013507487;XR_001231988 XP_005410000;XP_013362941 MODEL 9050633 pseudo LOC102020019 uncharacterized protein C12orf45 pseudogene NW_004955492 4532302 4532876 + 102020019 AGCD01060724 MODEL 9035741 protein-coding Tshr thyroid stimulating hormone receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); protein-containing complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH adenoma (ortholog); Adrenal Gland Neoplasms (ortholog); autoimmune thyroiditis (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); receptor complex (ortholog) NW_004955438 4601765 4758922 + 102024276 AGCD01035046;AGCD01035047;AGCD01035048;GBDF01190268;XM_005390231;XM_005390232;XM_005390233;XM_013517232;XM_013517233 XP_005390288;XP_005390289;XP_005390290;XP_013372686;XP_013372687 MODEL 8940020 protein-coding Fancl FA complementation group L ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); gamete generation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nuclear envelope (ortholog) NW_004955424 25251701 25307236 + 102003155 AGCD01025040;GBDF01279228;XM_005385759;XM_013514669 XP_005385816;XP_013370123 MODEL 8782846 protein-coding Plekho1 pleckstrin homology domain containing O1 INVOLVED IN lamellipodium morphogenesis (ortholog); myoblast fusion (ortholog); myoblast migration (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); FOUND IN mitochondrion (ortholog); muscle cell projection membrane (ortholog); ruffle membrane (ortholog) NW_004955413 603011 606487 - 102012525 AGCD01013481;GBDF01000598;GBDK01001593;XM_013511531 XP_013366985 MODEL 39131595 rrna 5S_rRNA 5S ribosomal RNA 8731782 protein-coding Gpn2 GPN-loop GTPase 2 ASSOCIATED WITH Perrault Syndrome 1 (ortholog) NW_004955452 6227126 6234143 - 102024752 AGCD01044098;GBDF01225856;XM_005394884;XR_001236067 XP_005394941 MODEL 8892147 protein-coding Rgp1 RGP1 partner of RAB6A GEF complex ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of protein catabolic process (ortholog); positive regulation of GTPase activity (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955472 550198 554038 - 102009375 AGCD01053340;GBBH01207777;GBDK01228476;XM_005401008 XP_005401065 MODEL 9042382 protein-coding Chit1 chitinase 1 ENCODES a protein that exhibits chitinase activity (ortholog); endochitinase activity (ortholog); INVOLVED IN chitin catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH allergic asthma (ortholog); allergic disease (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular space (ortholog) NW_004955406 39229161 39253328 - 102007296 AGCD01006623;AGCD01006624;GBBH01193383;XM_005375249;XM_013522548;XM_013522551;XM_013522552 XP_005375306;XP_013378002;XP_013378005;XP_013378006 MODEL 8897788 trna Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978787 AGCD01003541;AGCD01050597;AGCD01050631;AGCD01050636;AGCD01057309;AGCD01062085;AGCD01066489;AGCD01066490 MODEL 8829225 protein-coding Atraid all-trans retinoic acid induced differentiation factor ENCODES a protein that exhibits xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of osteoblast proliferation (ortholog); negative regulation of protein catabolic process (ortholog); FOUND IN lysosomal membrane (ortholog); nuclear envelope (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955469 9194656 9203292 + 102024550 AGCD01052496;GBDF01076159;XM_005400471 XP_005400528 MODEL 8845035 protein-coding Irgq immunity related GTPase Q ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); substrate localization to autophagosome (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN autophagosome (ortholog); lysosome (ortholog) NW_004955555 1328187 1335018 - 102016756 AGCD01073072;AGCD01073073;AGCD01073074;GBBH01082357;GBCE01069731;XM_013508749;XM_013508751 XP_013364203;XP_013364205 MODEL 8759530 protein-coding Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); ASSOCIATED WITH intellectual disability (ortholog); neurodegenerative disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) NW_004955407 41365920 41434090 - 102030154 AGCD01007865;GBCE01117797;GBDF01005441;XM_005375876 XP_005375933 MODEL 153211022 protein-coding TUBA1B tubulin alpha 1b 8805762 protein-coding Ar androgen receptor ENCODES a protein that exhibits androgen binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); animal organ formation (ortholog); cellular response to estrogen stimulus (ortholog); PARTICIPATES IN altered androgen signaling pathway; androgen signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); acute kidney failure (ortholog); alcohol dependence (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955475 7013960 7192473 + 102012423 AGCD01054992;AGCD01054993;AGCD01054994;AGCD01054995;AGCD01054996;GBCQ01091700;XM_005401581 XP_005401638 MODEL 39133488 snrna U4 U4 spliceosomal RNA 8933771 protein-coding Flna filamin A ENCODES a protein that exhibits actin filament binding (ortholog); DNA-binding transcription factor binding (ortholog); Fc-gamma receptor I complex binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; integrin mediated signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Aneurysm (ortholog); aortic aneurysm (ortholog); Arterial Thrombosis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actin filament bundle (ortholog) NW_004955580 874233 895172 + 102028037 AGCD01075628;GBDI01017513;GBDJ01003927;XM_013509692 XP_013365146 MODEL 39134398 misc_rna 7SK 7SK RNA 8916617 ncrna LOC102012543 uncharacterized LOC102012543 NW_004955421 4876441 4882855 + 102012543 AGCD01021704;GBCQ01090963;XR_001233851 MODEL 9045788 protein-coding Bmp4 bone morphogenetic protein 4 ENCODES a protein that exhibits BMP receptor binding (ortholog); chemoattractant activity (ortholog); co-receptor binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure regression (ortholog); angiogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glypican signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); Acute Otitis Media (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); vesicle (ortholog) NW_004955409 9432835 9439680 + 102005114 AGCD01009440;AGCD01009441;GBCQ01040326;XM_005376769;XM_005376770 XP_005376826;XP_005376827 MODEL 9062049 ncrna LOC102006068 uncharacterized LOC102006068 NW_004955522 4443395 4446145 - 102006068 AGCD01068417;GBDF01236174;XR_001231902 MODEL 8757974 protein-coding Atad2 ATPase family AAA domain containing 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955540 2166708 2228077 - 102030567 AGCD01071316;GBCQ01151375;XM_005410928;XM_013507927 XP_005410985;XP_013363381 MODEL 8813619 protein-coding Wdr81 WD repeat domain 81 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN aggrephagy (ortholog); early endosome to late endosome transport (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); cerebellar ataxia (ortholog); cerebellar ataxia, impaired intellectual development, and dysequilibrium syndrome 2 (ortholog); FOUND IN autophagosome membrane (ortholog); cytosol (ortholog); early endosome membrane (ortholog) NW_004955481 1450127 1462564 - 102016808 AGCD01056832;AGCD01056833;GBCE01008518;XM_005402608;XM_013503510;XM_013503511 XP_005402665;XP_013358964;XP_013358965 MODEL 8787961 protein-coding Ptpa protein phosphatase 2 phosphatase activator ENCODES a protein that exhibits ATP binding (ortholog); phosphatase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Disease Progression (ortholog); Parkinson's disease 25 (ortholog); Stomach Neoplasms (ortholog); FOUND IN ATPase complex (ortholog); calcium channel complex (ortholog); cytoplasm (ortholog) NW_004955570 1429316 1454820 + 102015788 AGCD01074814;GBDI01022159;XM_005413611 XP_005413668 MODEL 9025490 protein-coding Sfswap splicing factor SWAP INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA 5'-splice site recognition (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog) NW_004955482 808684 871377 - 102026112 AGCD01057189;GBDI01121728;XM_005402976;XM_005402977;XM_005402978;XM_005402980;XM_005402981;XM_005402983;XM_005402984 XP_005403033;XP_005403034;XP_005403035;XP_005403037;XP_005403038;XP_005403040;XP_005403041 MODEL 8892991 protein-coding Pdxp pyridoxal phosphatase ENCODES a protein that exhibits growth factor binding (ortholog); heat shock protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin rod assembly (ortholog); cellular response to ATP (ortholog); dephosphorylation (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cleavage furrow (ortholog) NW_004955413 24055900 24063902 + 102008839 AGCD01014346;AGCD01014347;GBDK01027422;XM_005379654 XP_005379711 MODEL 9001870 protein-coding Hook2 hook microtubule tethering protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); FHF complex (ortholog) NW_004955415 31855183 31865413 - 102021238 AGCD01016699;GBBH01142587;XM_005381026;XM_013512286;XM_013512287 XP_005381083;XP_013367740;XP_013367741 MODEL 8973069 protein-coding Adarb2 adenosine deaminase RNA specific B2 (inactive) ENCODES a protein that exhibits double-stranded RNA adenosine deaminase activity (ortholog); mRNA binding (ortholog); RNA sequestering activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); negative regulation of mRNA modification (ortholog); ASSOCIATED WITH Parkinson's disease (ortholog); substance-related disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 29705289 30028013 + 102011777 AGCD01022363;AGCD01022364;AGCD01022365;AGCD01022366;AGCD01022367;AGCD01022368;AGCD01022369;AGCD01022370;AGCD01022371;AGCD01022372;AGCD01022373;AGCD01022374;AGCD01022375;AGCD01022376;AGCD01022377;XM_013513649 XP_013369103 MODEL 8711922 protein-coding LOC102010104 olfactory receptor 7G2-like NW_004955563 273849 274787 + 102010104 AGCD01074059;XM_005413199 XP_005413256 MODEL 8835364 protein-coding Alpk2 alpha kinase 2 INVOLVED IN cardiac muscle cell development (ortholog); epicardium morphogenesis (ortholog); establishment of cell polarity (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955402 42749005 42871756 - 102010536 AGCD01001045;AGCD01001046;AGCD01001047;AGCD01001048;AGCD01001049;AGCD01001050;GBCB01023001;XM_005372989;XM_013511022;XM_013511023 XP_005373046;XP_013366476;XP_013366477 MODEL 8916355 ncrna LOC102022525 uncharacterized LOC102022525 NW_004955513 4826030 4833311 - 102022525 AGCD01066940;GBDK01062957;XR_001231759;XR_264480 MODEL 9020908 protein-coding Dnajc5b DnaJ heat shock protein family (Hsp40) member C5 beta NW_004955444 13069490 13162053 - 102019116 AGCD01039090;AGCD01039091;AGCD01039092;AGCD01039093;AGCD01039094;GBDF01000358;XM_013518139;XM_013518140;XM_013518142;XR_001235494 XP_013373593;XP_013373594;XP_013373596 MODEL 9002445 protein-coding Tshz1 teashirt zinc finger homeobox 1 INVOLVED IN anterior/posterior pattern specification (ortholog); middle ear morphogenesis (ortholog); soft palate development (ortholog); ASSOCIATED WITH Congenital Aural Atresia (ortholog); Familial Prostate Cancer (ortholog); intellectual disability (ortholog) NW_004955402 58695150 58717926 + 102015164 AGCD01001539;GBDK01397330;XM_013511962 XP_013367416 MODEL 8993656 ncrna LOC102019739 uncharacterized LOC102019739 NW_004955545 2273149 2281175 - 102019739 AGCD01071893;AGCD01071894;GBDK01416812;XR_264874 MODEL 8890791 pseudo LOC102018158 nascent polypeptide-associated complex subunit alpha-like NW_004955455 10593876 10627433 + 102018158 AGCD01045958;AGCD01045959 MODEL 39134085 misc_rna 7SK 7SK RNA 8719140 pseudo LOC102007118 casein kinase I isoform alpha pseudogene NW_004955416 10129649 10130798 + 102007118 AGCD01017109 MODEL 39133489 snrna U4 U4 spliceosomal RNA 10098307 ncrna LOC106150116 uncharacterized LOC106150116 NW_004955465 9553523 9567406 + 106150116 AGCD01050492;GBDF01152782;XR_001236734 MODEL 8870204 protein-coding Cbl Cbl proto-oncogene ENCODES a protein that exhibits ephrin receptor binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); B-lymphoblastic leukemia/lymphoma with hyperdiploidy (ortholog); FOUND IN axon (ortholog); cilium (ortholog); cytosol (ortholog) NW_004955412 20307011 20388539 + 102004586 AGCD01013004;AGCD01013005;AGCD01013006;AGCD01013007;GBDF01124291;XM_005378327 XP_005378384 MODEL 8848504 protein-coding LOC102020026 olfactory receptor 7G1-like NW_004955495 166030 171481 - 102020026 AGCD01061606;XM_005406115 XP_005406172 MODEL 9016582 protein-coding Bbs12 Bardet-Biedl syndrome 12 INVOLVED IN chaperone-mediated protein complex assembly (ortholog); eating behavior (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 12 (ortholog) NW_004955428 17957672 17966638 - 102013634 AGCD01028054;AGCD01028055;GBDJ01171174;XM_005386764;XM_005386765;XM_005386766;XM_005386767;XM_005386768 XP_005386821;XP_005386822;XP_005386823;XP_005386824;XP_005386825 MODEL 8833333 protein-coding Hes7 hes family bHLH transcription factor 7 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH genetic disease (ortholog); spondylocostal dysostosis 2 (ortholog); spondylocostal dysostosis 4 (ortholog) NW_004955467 8837895 8841062 + 102024542 AGCD01051475;GBDJ01193638;XM_005399434 XP_005399491 MODEL 9005393 protein-coding LOC102005326 zinc finger protein 271-like NW_004955402 22009497 22049009 + 102005326 AGCD01000595;AGCD01000596;AGCD01000597;AGCD01000598;GBDJ01165251;XM_005372797;XM_005372798;XM_005372799;XM_013509230;XM_013509319;XM_013509375;XM_013509440 XP_005372854;XP_005372855;XP_005372856;XP_013364684;XP_013364773;XP_013364829;XP_013364894 MODEL 39131927 snrna U1 U1 spliceosomal RNA 8943864 protein-coding Wdr82 WD repeat domain 82 ENCODES a protein that exhibits chromatin binding (ortholog); lncRNA binding (ortholog); INVOLVED IN gene expression (ortholog); lncRNA catabolic process (ortholog); negative regulation of DNA-templated transcription, elongation (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); histone methyltransferase complex (ortholog) NW_004955532 3860785 3880714 - 102027900 AGCD01070302;GBDK01090445;XM_005410348 XP_005410405 MODEL 39131596 rrna 5S_rRNA 5S ribosomal RNA 8794965 protein-coding Traf4 TNF receptor associated factor 4 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); thioesterase binding (ortholog); INVOLVED IN positive regulation of JNK cascade (ortholog); positive regulation of protein kinase activity (ortholog); respiratory gaseous exchange by respiratory system (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955481 4410906 4417553 - 102021125 AGCD01056936;AGCD01056937;GBBH01119444;GBDJ01179774;XM_005402714 XP_005402771 MODEL 8799882 protein-coding LOC102010896 protocadherin beta-4-like NW_004955415 12626696 12673195 - 102010896 AGCD01016208;AGCD01016209;AGCD01016210;AGCD01016211;AGCD01016212;AGCD01016213;AGCD01016214;AGCD01016215;AGCD01016216;AGCD01016217;AGCD01016218;GBDJ01233417;XM_013512127 XP_013367581 MODEL 8889064 protein-coding LOC102017407 angiopoietin-4-like NW_004955596 225427 237637 + 102017407 AGCD01076510;AGCD01076511;XM_013510011;XM_013510012 XP_013365465;XP_013365466 MODEL 8943205 protein-coding Timm9 translocase of inner mitochondrial membrane 9 ENCODES a protein that exhibits membrane insertase activity (ortholog); protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) NW_004955466 12115003 12125024 - 102005688 AGCD01051113;GBCE01045930;XM_005399218;XM_005399219;XM_013521977 XP_005399275;XP_005399276;XP_013377431 MODEL 8774065 protein-coding Irs1 insulin receptor substrate 1 ENCODES a protein that exhibits insulin receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphatidylinositol 3-kinase activator activity (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); Alzheimer's disease (ortholog); coronary artery disease (ortholog); FOUND IN caveola (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955453 7685715 7742262 + 102016015 AGCD01044750;GBCB01002406;XM_005395475 XP_005395532 MODEL 9008896 protein-coding Kiss1 KiSS-1 metastasis suppressor ENCODES a protein that exhibits kisspeptin receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN decidualization (ortholog); G protein-coupled receptor signaling pathway (ortholog); generation of ovulation cycle rhythm (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Delayed Puberty (ortholog); disorder of sexual development (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular space (ortholog); neuronal cell body (ortholog) NW_004955406 40043139 40045973 - 102018891 AGCD01006652;GBCQ01059228;XM_005375288 XP_005375345 MODEL 39134399 misc_rna 7SK 7SK RNA 10388040 ncrna LOC106147145 uncharacterized LOC106147145 NW_004955523 229481 253714 - 106147145 AGCD01068438;AGCD01068439;AGCD01068440;GBBH01112506;XR_001231913;XR_001231914 MODEL 8773632 protein-coding Gfra1 GDNF family receptor alpha 1 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); integrin binding (ortholog); neurotrophin receptor activity (ortholog); INVOLVED IN cell migration (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Churg-Strauss syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955431 20859152 21070886 - 102021035 AGCD01030485;AGCD01030486;AGCD01030487;AGCD01030488;AGCD01030489;AGCD01030490;GBDK01005285;XM_005387842;XM_005387843;XM_005387844;XM_005387845 XP_005387899;XP_005387900;XP_005387901;XP_005387902 MODEL 8940666 pseudo LOC102003598 SRSF protein kinase 1 pseudogene NW_004955447 5510865 5512873 + 102003598 AGCD01040759 MODEL 39133815 misc_rna 7SK 7SK RNA 8722625 protein-coding Echdc2 enoyl-CoA hydratase domain containing 2 FOUND IN mitochondrion (ortholog) NW_004955464 6284436 6300908 + 102015299 AGCD01050022;AGCD01050023;GBCE01047957;XM_005398567;XM_005398570;XM_013521720 XP_005398624;XP_005398627;XP_013377174 MODEL 8925317 protein-coding Fancm FA complementation group M ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); positive regulation of protein monoubiquitination (ortholog); replication fork processing (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); azoospermia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955409 16751658 16809352 - 102003629 AGCD01009739;AGCD01009740;AGCD01009741;AGCD01009742;AGCD01009743;GBDF01005725;XM_013510101 XP_013365555 MODEL 39132393 snrna U6 U6 spliceosomal RNA 9048651 protein-coding Plekho2 pleckstrin homology domain containing O2 INVOLVED IN macrophage apoptotic process (ortholog); ASSOCIATED WITH carotid stenosis (ortholog); colorectal cancer (ortholog) NW_004955450 10692305 10714031 - 102015262 AGCD01042632;GBCE01154962;XM_005393747 XP_005393804 MODEL 9030511 protein-coding Hook3 hook microtubule tethering protein 3 ENCODES a protein that exhibits dynactin binding (ortholog); dynein intermediate chain binding (ortholog); dynein light chain binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); early endosome to late endosome transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH Dwarfism (ortholog); polycystic ovary syndrome (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cis-Golgi network (ortholog) NW_004955457 13149013 13249524 + 102013055 AGCD01047039;AGCD01047040;GBDF01303775;GBDF01303780;XM_005397072;XM_005397073 XP_005397129;XP_005397130 MODEL 8837098 protein-coding Gpn3 GPN-loop GTPase 3 INVOLVED IN protein import into nucleus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955482 7367000 7383951 - 102022921 AGCD01057460;AGCD01057461;AGCD01057462;AGCD01057463;AGCD01057464;GBDK01195941;XM_005403151 XP_005403208 MODEL 8712852 protein-coding Adat1 adenosine deaminase tRNA specific 1 ENCODES a protein that exhibits RNA binding (ortholog); tRNA-specific adenosine deaminase activity (ortholog); INVOLVED IN tRNA processing (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955484 1942868 1964901 + 102017878 AGCD01058073;GBDI01263685;XM_013504003;XM_013504004;XM_013504005;XM_013504006;XM_013504007;XM_013504008 XP_013359457;XP_013359458;XP_013359459;XP_013359460;XP_013359461;XP_013359462 MODEL 8808835 protein-coding Rgr retinal G protein coupled receptor INVOLVED IN retinoid metabolic process (ortholog); ASSOCIATED WITH cone dystrophy (ortholog); fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955510 3752118 3762251 + 102004738 AGCD01066247;XM_005407884 XP_005407941 MODEL 8705713 protein-coding Chka choline kinase alpha ENCODES a protein that exhibits ATP binding (ortholog); choline binding (ortholog); choline kinase activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); choline metabolic process (ortholog); ethanolamine metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH colon adenoma (ortholog); colon cancer (ortholog); epilepsy (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog) NW_004955422 17710981 17766256 + 102006673 AGCD01022932;GBDF01051159;XM_005384285;XM_005384286 XP_005384342;XP_005384343 MODEL 8863249 protein-coding Alpk3 alpha kinase 3 INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); cardiovascular system disease (ortholog); Dilated Cardiomyopathy with Left Ventricular Noncompaction (ortholog); FOUND IN nucleus (ortholog) NW_004955416 14279831 14322836 - 102010256 AGCD01017249;AGCD01017250;AGCD01017251;AGCD01017252;AGCD01017253;GBCB01004832;XM_005381489;XM_005381491 XP_005381546;XP_005381548 MODEL 8933342 pseudo LOC102019740 mediator of RNA polymerase II transcription subunit 28 pseudogene NW_004955547 1567815 1568355 - 102019740 AGCD01072233 MODEL 8828043 protein-coding Agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN phospholipid metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial outer membrane (ortholog) NW_004955439 20050619 20132893 + 102009991 AGCD01036103;AGCD01036104;AGCD01036105;AGCD01036106;GBCQ01063027;GBDK01230032;XM_013517398 XP_013372852 MODEL 8966311 pseudo LOC102024211 tetraspanin-12-like NW_004955469 7511965 7512635 - 102024211 AGCD01052417 MODEL 8926991 protein-coding LOC102021530 uncharacterized LOC102021530 NW_004955409 2232328 2240671 + 102021530 AGCD01009192;AGCD01009193;GBDI01039009;XM_013510034 XP_013365488 MODEL 8985901 protein-coding Atrip ATR interacting protein ASSOCIATED WITH Aicardi-Goutieres Syndrome 1 (ortholog); systemic lupus erythematosus (ortholog) NW_004955532 516772 533774 + 102026254 AGCD01070129;AGCD01070130;GBDF01044899;XM_005410152;XM_013507609 XP_005410209;XP_013363063 MODEL 8971751 protein-coding Araf A-Raf proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of peptidyl-serine phosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); high grade glioma (ortholog); X-linked epilepsy with variable learning disabilities and behavior disorders (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) NW_004955516 521479 532980 - 102013202 AGCD01067385;GBBH01063423;XM_005408933;XM_013506911 XP_005408990;XP_013362365 MODEL 8827353 protein-coding LOC102015122 probable N-acetyltransferase CML3 NW_004955424 12100191 12102196 + 102015122 AGCD01024595;GBDF01057633;XM_005385559 XP_005385616 MODEL 8717997 protein-coding Flnb filamin B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to type II interferon (ortholog); epithelial cell morphogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Atelosteogenesis Type 1 (ortholog); Atelosteogenesis Type 3 (ortholog); bone development disease (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955430 7680394 7832124 + 102020827 AGCD01029367;AGCD01029368;AGCD01029369;AGCD01029370;AGCD01029371;GBDF01196019;XM_005387431;XM_005387432;XM_005387433;XM_013515640 XP_005387488;XP_005387489;XP_005387490;XP_013371094 MODEL 8875293 protein-coding Bmp5 bone morphogenetic protein 5 ENCODES a protein that exhibits BMP receptor binding (ortholog); INVOLVED IN allantois development (ortholog); anterior head development (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Congenital Microtia (ortholog); Meier-Gorlin syndrome (ortholog); FOUND IN extracellular space (ortholog); vesicle (ortholog) NW_004955411 450674 557213 + 102003741 AGCD01011458;AGCD01011459;AGCD01011460;AGCD01011461;GBCE01076623;XM_005377586;XM_013510909 XP_005377643;XP_013366363 MODEL 39132167 rrna 5S_rRNA 5S ribosomal RNA 39134086 misc_rna 7SK 7SK RNA 8986771 ncrna LOC102007121 uncharacterized LOC102007121 NW_004955482 3110012 3117667 + 102007121 AGCD01057259;GBDF01304912;XR_263825 MODEL 9021479 protein-coding Atad2b ATPase family AAA domain containing 2B ENCODES a protein that exhibits histone reader activity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955469 6022152 6162222 - 102022070 AGCD01052364;AGCD01052365;GBDJ01386641;XM_005400366;XM_005400367 XP_005400423;XP_005400424 MODEL 8874983 protein-coding Ptpdc1 protein tyrosine phosphatase domain containing 1 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog) NW_004955515 3912495 4044999 + 102021161 AGCD01067307;AGCD01067308;AGCD01067309;AGCD01067310;AGCD01067311;AGCD01067312;AGCD01067313;GBDF01081967;XM_005408888;XM_005408890;XM_005408891;XM_005408892;XM_005408894 XP_005408945;XP_005408947;XP_005408948;XP_005408949;XP_005408951 MODEL 8985725 ncrna LOC102020029 uncharacterized LOC102020029 NW_004955425 15454418 15465300 - 102020029 AGCD01025581;AGCD01025582;GBDK01228458;XR_001234260 MODEL 9004883 protein-coding Cblb Cbl proto-oncogene B ENCODES a protein that exhibits protein kinase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); immune response (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Experimental Arthritis (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); infantile onset multisystem autoimmune disease 3 (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955427 6601651 6812896 - 102016178 AGCD01027033;AGCD01027034;AGCD01027035;AGCD01027036;AGCD01027037;AGCD01027038;GBCE01136888;GBDF01083852;XM_013515156 XP_013370610 MODEL 15036848 trna Trnag-acc transfer RNA glycine (anticodon ACC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978843 9002998 protein-coding LOC102010105 leukocyte immunoglobulin-like receptor subfamily B member 4 NW_004955567 1451186 1471664 - 102010105 AGCD01074476;GBCE01047626;XM_013509228 XP_013364682 MODEL 9054350 protein-coding Bbs2 Bardet-Biedl syndrome 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); artery smooth muscle contraction (ortholog); brain morphogenesis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/2, Digenic (ortholog); FOUND IN BBSome (ortholog); ciliary basal body (ortholog); ciliary membrane (ortholog) NW_004955433 14266190 14321780 - 102016408 AGCD01031711;GBDK01058610;XM_005388353;XM_013516125 XP_005388410;XP_013371579 MODEL 8861831 pseudo LOC102022528 integral membrane protein GPR180 pseudogene NW_004955432 3205501 3206196 + 102022528 AGCD01030638 MODEL 39132394 snrna U6 U6 spliceosomal RNA 9009767 pseudo LOC102012546 ribosome biogenesis protein NSA2 homolog pseudogene NW_004955492 272333 273124 + 102012546 AGCD01060632 MODEL 9020760 protein-coding Tuba4a tubulin alpha 4a ENCODES a protein that exhibits enzyme binding (ortholog); protein kinase binding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 10 (ortholog); amyotrophic lateral sclerosis type 22 (ortholog); FOUND IN cilium (ortholog); cytoskeleton (ortholog); microtubule (ortholog) NW_004955453 14177043 14180814 + 102012828 AGCD01044859;GBDF01046528;XM_005395550 XP_005395607 MODEL 8773276 protein-coding LOC102018160 olfactory receptor 6C70-like NW_004955458 3167363 3168304 + 102018160 AGCD01047276;XM_013520812 XP_013376266 MODEL 8785843 protein-coding Rgs1 regulator of G protein signaling 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); leukotriene signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Arsenic Poisoning (ortholog); COVID-19 (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955406 30042354 30047172 + 102017535 AGCD01006357;GBDK01060690;XM_005375098 XP_005375155 MODEL 8844690 pseudo LOC102006077 non-histone chromosomal protein HMG-14 pseudogene NW_004955547 2571567 2571850 - 102006077 AGCD01072283 MODEL 8816920 pseudo LOC102021531 zinc finger CCHC-type and RNA-binding motif-containing protein 1-like NW_004955460 10685107 10694650 + 102021531 AGCD01048600 MODEL 8957259 protein-coding Pdyn prodynorphin INVOLVED IN locomotion involved in locomotory behavior (ortholog); response to ethanol (ortholog); response to immobilization stress (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); Alcohol Withdrawal Seizures (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN axon terminus (ortholog); dendritic spine (ortholog); dense core granule (ortholog) NW_004955415 13106087 13119497 - 102012315 AGCD01016242;GBDJ01390054;XM_005380743;XM_005380744 XP_005380800;XP_005380801 MODEL 10159597 pseudo LOC106150117 talin-2 pseudogene NW_004955406 29598329 29599442 + 106150117 AGCD01006335 MODEL 39134400 misc_rna 7SK 7SK RNA 8861275 pseudo LOC102003599 ubiquitin-like protein ATG12 pseudogene NW_004955448 10940263 10942006 + 102003599 AGCD01041506 MODEL 8821254 protein-coding Hesx1 HESX homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH amenorrhea (ortholog); combined or isolated pituitary hormone deficiency 1 (ortholog); combined pituitary hormone deficiency (ortholog); FOUND IN nucleus (ortholog) NW_004955430 6955575 6956991 - 102013639 AGCD01029328;XM_005387406 XP_005387463 MODEL 8981339 protein-coding Gfra2 GDNF family receptor alpha 2 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); heparan sulfate binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of protein autophosphorylation (ortholog); ASSOCIATED WITH Optic Nerve Injuries (ortholog); Parkinsonism (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 45235161 45324825 - 102027601 AGCD01002813;GBDK01236692;XM_005373635;XM_005373636;XM_005373637 XP_005373692;XP_005373693;XP_005373694 MODEL 8947317 protein-coding Dnajc5g DnaJ heat shock protein family (Hsp40) member C5 gamma NW_004955469 9254372 9257235 + 102026416 AGCD01052498;GBDK01426747;XM_005400478 XP_005400535 MODEL 39131597 rrna 5S_rRNA 5S ribosomal RNA 39134401 misc_rna 7SK 7SK RNA 8740500 pseudo LOC102017413 U1 small nuclear ribonucleoprotein C pseudogene NW_004955621 12028 14863 + 102017413 AGCD01077370 MODEL 8881027 protein-coding LOC102010898 creatine kinase U-type, mitochondrial NW_004955416 10117075 10122968 + 102010898 AGCD01017108;AGCD01017109;GBDJ01024945;XM_013512557;XM_013512558 XP_013368011;XP_013368012 MODEL 9047488 protein-coding Traf5 TNF receptor associated factor 5 ENCODES a protein that exhibits identical protein binding (ortholog); thioesterase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN CD40 signaling pathway (ortholog); interleukin-17-mediated signaling pathway (ortholog); mRNA stabilization (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN CD40 receptor complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955489 935601 995162 - 102014056 AGCD01059824;GBCB01012256;XM_005404503;XR_001231193;XR_001231194 XP_005404560 MODEL 9002953 protein-coding Chkb choline kinase beta ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); megaconial type congenital muscular dystrophy (ortholog); muscular dystrophy (ortholog) NW_004955413 33588375 33592054 - 102007984 AGCD01014681;GBCE01056009;XM_005379593;XM_005379594 XP_005379650;XP_005379651 MODEL 8772321 protein-coding Timmdc1 translocase of inner mitochondrial membrane domain containing 1 ASSOCIATED WITH Leigh disease (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); nuclear type mitochondrial complex I deficiency 31 (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955427 19208029 19234763 + 102018005 AGCD01027360;AGCD01027361;AGCD01027362;GBDF01223947;XM_005386443;XM_013515089 XP_005386500;XP_013370543 MODEL 8819921 protein-coding Agpat5 1-acylglycerol-3-phosphate O-acyltransferase 5 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acylglycerol metabolic process (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Keloid (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog); nuclear envelope (ortholog) NW_004955403 54005001 54052363 - 102023319 AGCD01003083;AGCD01003084;GBBH01005916;GBCQ01126069;XM_013514614 XP_013370068 MODEL 8870464 pseudo LOC102015126 coiled-coil-helix-coiled-coil-helix domain-containing protein 2 pseudogene NW_004955498 607912 608495 + 102015126 AGCD01062723 MODEL 8922348 pseudo LOC102024212 ubiquitin-fold modifier 1 pseudogene NW_004955470 1453839 1454161 + 102024212 AGCD01052641;XM_005400594 MODEL 39133816 misc_rna 7SK 7SK RNA 8790293 protein-coding Flnc filamin C ENCODES a protein that exhibits ankyrin binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN muscle cell development (ortholog); sarcomere organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); cardiovascular system disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sarcolemma (ortholog) NW_004955479 9633817 9661725 + 102003129 AGCD01056485;GBCB01006284;XM_005402388;XM_005402389;XM_005402390;XM_005402391 XP_005402445;XP_005402446;XP_005402447;XP_005402448 MODEL 39134087 misc_rna 7SK 7SK RNA 8977426 pseudo LOC102005328 peroxiredoxin-1 pseudogene NW_004955402 31453916 31455006 + 102005328 AGCD01000789 MODEL 8832887 protein-coding LOC102007123 olfactory receptor 15-like NW_004955418 29652822 29653751 - 102007123 AGCD01019476;XM_005382358 XP_005382415 MODEL 39131575 protein-coding TSHZ1 teashirt zinc finger homeobox 1 39131928 snrna U1 U1 spliceosomal RNA 153211029 protein-coding PLEKHO2 pleckstrin homology domain containing O2 8862512 protein-coding Wdr83 WD repeat domain 83 INVOLVED IN inflammatory response to wounding (ortholog); mRNA splicing, via spliceosome (ortholog); neural tube closure (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955415 31774017 31778737 + 102018387 AGCD01016697;GBDF01114913;XM_005381017 XP_005381074 MODEL 8744501 protein-coding Pdzd11 PDZ domain containing 11 INVOLVED IN pore complex assembly (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytosol (ortholog); pore complex (ortholog) NW_004955475 9841950 9845565 - 102022693 AGCD01055075;GBDK01077848;XM_005401618;XM_005401619;XM_005401620;XM_013502873 XP_005401675;XP_005401676;XP_005401677;XP_013358327 MODEL 8716520 protein-coding LOC102003601 EKC/KEOPS complex subunit LAGE3-like NW_004955585 4764 6040 + 102003601 AGCD01075987;XM_005414426 XP_005414483 MODEL 8699729 protein-coding Gpnmb glycoprotein nmb ENCODES a protein that exhibits heparin binding (ortholog); integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN bone mineralization (ortholog); cell adhesion (ortholog); cell-cell signaling (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasmic vesicle (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955410 25554279 25583368 + 102013481 AGCD01011159;AGCD01011160;AGCD01011161;GBDK01002119;XM_005377395;XM_013510586 XP_005377452;XP_013366040 MODEL 8876856 protein-coding Sft2d1 SFT2 domain containing 1 NW_004955439 15555080 15575698 + 102027115 AGCD01036004;GBBH01064219;XM_005390657 XP_005390714 MODEL 8873730 protein-coding Irs2 insulin receptor substrate 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); insulin receptor binding (ortholog); phosphatidylinositol 3-kinase activator activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to endothelin (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN erythropoietin signaling pathway; insulin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Diabetic Nephropathies (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955404 2531484 2555383 + 102015915 AGCD01003261;AGCD01003262;GBBH01000570;GBDF01076651;XM_013515759 XP_013371213 MODEL 39133490 snrna U4 U4 spliceosomal RNA 39132168 rrna 5S_rRNA 5S ribosomal RNA 9016217 protein-coding Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); type 1 angiotensin receptor binding (ortholog); INVOLVED IN negative regulation of stress fiber assembly (ortholog); photoreceptor cell maintenance (ortholog); positive regulation of filopodium assembly (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN early endosome (ortholog); extrinsic component of plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955414 18667108 18726259 + 102020792 AGCD01015286;GBCQ01122216;XM_005379969;XM_005379970;XM_005379972;XM_005379973;XM_005379975;XM_005379977;XM_005379979;XM_013511970 XP_005380026;XP_005380027;XP_005380029;XP_005380030;XP_005380032;XP_005380034;XP_005380036;XP_013367424 MODEL 8718679 protein-coding Kiss1r KISS1 receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN arachidonate secretion (ortholog); calcium-mediated signaling (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH breast cancer (ortholog); central precocious puberty 1 (ortholog); cryptorchidism (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); membrane (ortholog) NW_004955495 6918632 6921891 - 102017471 AGCD01062100;GBDI01039469;XM_005406013;XM_013505106 XP_005406070;XP_013360560 MODEL 8870917 protein-coding Atrn attractin ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cerebellum development (ortholog); myelination (ortholog); pigmentation (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); Nerve Degeneration (ortholog); FOUND IN extracellular space (ortholog) NW_004955415 14341635 14505955 + 102027174 AGCD01016297;AGCD01016298;AGCD01016299;GBCB01099530;XM_005380794;XM_005380795 XP_005380851;XP_005380852 MODEL 9055836 protein-coding Bmp6 bone morphogenetic protein 6 ENCODES a protein that exhibits BMP receptor binding (ortholog); cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); adult T-cell leukemia/lymphoma (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog); vesicle (ortholog) NW_004955465 6053600 6201254 - 102020895 AGCD01050437;AGCD01050438;GBCE01031404;GBCQ01095928;XM_013521839 XP_013377293 MODEL 8988336 protein-coding Echdc3 enoyl-CoA hydratase domain containing 3 ENCODES a protein that exhibits enoyl-CoA hydratase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); positive regulation of cellular response to insulin stimulus (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955421 27712527 27731141 + 102011128 AGCD01022288;AGCD01022289;GBCE01007605;GBDK01129491;XM_013513801 XP_013369255 MODEL 39131351 protein-coding FANK1 fibronectin type III and ankyrin repeat domains 1 8799751 protein-coding Agps alkylglycerone phosphate synthase ENCODES a protein that exhibits alkylglycerone-phosphate synthase activity (ortholog); INVOLVED IN lipid biosynthetic process (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); Experimental Sarcoma (ortholog); genetic disease (ortholog); FOUND IN peroxisome (ortholog) NW_004955403 19253784 19381883 - 102006089 AGCD01002121;AGCD01002122;AGCD01002123;AGCD01002124;GBDJ01175162;XM_005373401 XP_005373458 MODEL 8860547 trna Trnag-ccc transfer RNA glycine (anticodon CCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955442;NW_004955424 16570981;14887366 16571051;14887436 +;+ 101978846 AGCD01024664;AGCD01037901 MODEL 9046264 protein-coding Atad5 ATPase family AAA domain containing 5 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); neurilemmoma (ortholog); ovarian carcinoma (ortholog); FOUND IN Elg1 RFC-like complex (ortholog); nucleus (ortholog) NW_004955481 6986128 7031113 + 102021970 AGCD01057046;AGCD01057047;GBDF01075712;XM_005402808 XP_005402865 MODEL 9040054 pseudo LOC102022532 olfactory receptor 24-like NW_004955524 1445223 1447462 - 102022532 AGCD01068750 MODEL 8765574 protein-coding Adat2 adenosine deaminase tRNA specific 2 NW_004955436 16956211 16978070 + 102008886 AGCD01033938;GBDF01178538;XM_005389250;XM_013516646;XR_001234969 XP_005389307;XP_013372100 MODEL 8982786 protein-coding Hexa hexosaminidase subunit alpha ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); dermatan sulfate proteoglycan catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); GM2 gangliosidosis (ortholog); FOUND IN azurophil granule (ortholog); extracellular space (ortholog); lysosome (ortholog) NW_004955450 4790342 4806862 + 102027925 AGCD01042477;GBDF01001103;XM_005393604 XP_005393661 MODEL 10308933 protein-coding LOC106147146 translation initiation factor IF-2-like NW_004955523 680842 682370 + 106147146 AGCD01068475;GBDF01246252;XM_013507117 XP_013362571 MODEL 8809632 protein-coding Alpl alkaline phosphatase, biomineralization associated ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); calcium ion binding (ortholog); phosphoamidase activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion homeostasis (ortholog); cementum mineralization (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH adult hypophosphatasia (ortholog); alpha thalassemia-X-linked intellectual disability syndrome (ortholog); Alveolar Bone Loss (ortholog); FOUND IN extracellular matrix (ortholog); extracellular membrane-bounded organelle (ortholog); extracellular space (ortholog) NW_004955452 1820212 1873877 + 102029036 AGCD01043868;AGCD01043869;GBCE01004528;XM_013519688;XM_013519689;XM_013519690 XP_013375142;XP_013375143;XP_013375144 MODEL 8894783 ncrna LOC102018165 uncharacterized LOC102018165 NW_004955409 31850420 31855944 - 102018165 AGCD01010341;AGCD01010342;GBDF01146276;XR_259800 MODEL 8757737 protein-coding Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 INVOLVED IN clathrin coat disassembly (ortholog); clathrin-dependent endocytosis (ortholog); regulation of clathrin coat assembly (ortholog); PARTICIPATES IN altered clathrin-dependent synaptic vesicle endocytosis; clathrin-dependent synaptic vesicle endocytosis; Parkinson's disease pathway; ASSOCIATED WITH Combined Cerebellar and Peripheral Ataxia with Hearing Loss and Diabetes Mellitus (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extrinsic component of presynaptic endocytic zone membrane (ortholog); postsynaptic density (ortholog); synapse (ortholog) NW_004955423 25269459 25382664 - 102024128 AGCD01024060;AGCD01024061;AGCD01024062;AGCD01024063;AGCD01024064;AGCD01024065;AGCD01024066;AGCD01024067;AGCD01024068;GBDI01085057;XM_005385302;XM_005385303;XM_013514470 XP_005385359;XP_005385360;XP_013369924 MODEL 8902550 protein-coding Pdzd2 PDZ domain containing 2 ASSOCIATED WITH lissencephaly (ortholog); FOUND IN apical part of cell (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955426 17600722 17974916 + 102020587 AGCD01026505;AGCD01026506;AGCD01026507;AGCD01026508;AGCD01026509;GBDK01131281;XM_005386151;XM_005386153;XM_013514972;XM_013514973 XP_005386208;XP_005386210;XP_013370426;XP_013370427 MODEL 8879454 protein-coding Rgs10 regulator of G protein signaling 10 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled acetylcholine receptor signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); response to amphetamine (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Experimental Seizures (ortholog); opioid abuse (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955551 318229 348578 - 102009228 AGCD01072654;GBDI01084285;XM_005412158;XM_013508591 XP_005412215;XP_013364045 MODEL 8763459 protein-coding Ptpmt1 protein tyrosine phosphatase mitochondrial 1 ENCODES a protein that exhibits phosphatidylglycerophosphatase activity (ortholog); phosphatidylinositol-5-phosphate phosphatase activity (ortholog); INVOLVED IN cardiolipin biosynthetic process (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; inositol metabolic pathway; ASSOCIATED WITH Neurodevelopmental disorder with ataxia and brain abnormalities (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955422 723236 724761 - 102007132 AGCD01022432;GBBH01076389;GBCQ01018067;XM_005384942 XP_005384999 MODEL 8960832 pseudo LOC102020030 protein S100-A10 pseudogene NW_004955500 8195394 8197521 - 102020030 AGCD01063984 MODEL 8819958 protein-coding Hopx HOP homeobox ENCODES a protein that exhibits histone deacetylase regulator activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); heart development (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleus (ortholog) NW_004955447 14417014 14417797 + 102025190 AGCD01041004;GBDI01121374;GBDK01014444;XM_013518542 XP_013373996 MODEL 8847591 protein-coding Cblc Cbl proto-oncogene C ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN negative regulation of epidermal growth factor receptor signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of neuron apoptotic process (ortholog) NW_004955555 1921896 1941247 + 102021284 AGCD01073116;AGCD01073117;GBBH01167021;GBDK01135462;XM_013508694;XM_013508695;XM_013508696;XM_013508697;XM_013508698 XP_013364148;XP_013364149;XP_013364150;XP_013364151;XP_013364152 MODEL 39134088 misc_rna 7SK 7SK RNA 8838941 protein-coding LOC102010107 protein bunched, class 1/class 3/D/E isoforms-like NW_004955573 470280 471584 + 102010107 AGCD01074980;AGCD01074981;GBDF01228221;XM_005413775 XP_005413832 MODEL 8707149 ncrna LOC102005329 uncharacterized LOC102005329 NW_004955602 418672 420204 - 102005329 AGCD01076784;GBDF01158942;XR_265157 MODEL 8756228 ncrna LOC102012550 uncharacterized LOC102012550 NW_004955422 29069963 29074568 + 102012550 AGCD01023378;GBDJ01405387;XR_260929 MODEL 39131600 rrna 5S_rRNA 5S ribosomal RNA 8777383 protein-coding Gfra3 GDNF family receptor alpha 3 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); glial cell-derived neurotrophic factor receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); neuron development (ortholog); ASSOCIATED WITH prostate cancer (ortholog); sciatic neuropathy (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955418 2152887 2162883 + 102003341 AGCD01018746;AGCD01018747;GBBH01050450;GBDF01052356;XM_013512867 XP_013368321 MODEL 8729318 protein-coding Bbs4 Bardet-Biedl syndrome 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); dynactin binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adult behavior (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 4 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); centriole (ortholog) NW_004955450 4624634 4668470 - 102027595 AGCD01042470;AGCD01042471;AGCD01042472;AGCD01042473;AGCD01042474;GBDJ01314473;XM_013518828 XP_013374282 MODEL 39134402 misc_rna 7SK 7SK RNA 8723562 protein-coding Wdr83os WD repeat domain 83 opposite strand ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH VARIABLE FAMILIAL HYPERCHOLANEMIA (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog) NW_004955415 31772401 31773916 - 102018721 AGCD01016697;GBCQ01011781;XM_005381018 XP_005381075 MODEL 9061083 pseudo LOC102022533 mitogen-activated protein kinase 1-like NW_004955524 298974 300265 + 102022533 AGCD01068675 MODEL 8883687 protein-coding Tuba8 tubulin alpha 8 INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant isolated macrothrombocytopenia 2 (ortholog); Duane retraction syndrome (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) NW_004955454 6129821 6148645 + 102006872 AGCD01045219;AGCD01045220;GBCE01040780;XM_005395986 XP_005396043 MODEL 8993464 protein-coding Gpr101 G protein-coupled receptor 101 ASSOCIATED WITH growth hormone secreting pituitary adenoma (ortholog); growth hormone secreting pituitary adenoma 2 (ortholog); FOUND IN receptor complex (ortholog) NW_004955489 8125763 8127280 + 102009617 AGCD01060001;XM_005404577 XP_005404634 MODEL 8933063 protein-coding Traf6 TNF receptor associated factor 6 ENCODES a protein that exhibits histone deacetylase binding (ortholog); protein kinase B binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antiviral innate immune response (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); coronary artery disease (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955422 9925765 9950354 + 102004940 AGCD01022725;AGCD01022726;GBBH01094516;GBDF01224038;XM_005384105 XP_005384162 MODEL 8954792 ncrna LOC102021532 uncharacterized LOC102021532 NW_004955410 9692203 9701655 + 102021532 AGCD01010773;GBDF01305484;XR_259828 MODEL 8749074 pseudo LOC102015127 fatty acid-binding protein, epidermal pseudogene NW_004955424 1009254 1019318 + 102015127 AGCD01024227 MODEL 10158200 protein-coding LOC106147147 vegetative cell wall protein gp1-like NW_004955523 686979 695179 + 106147147 AGCD01068475;AGCD01068476;GBDI01034822;XM_013507118 XP_013362572 MODEL 8951818 protein-coding Chl1 cell adhesion molecule L1 like ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axon guidance (ortholog); axon regeneration (ortholog); ASSOCIATED WITH epilepsy (ortholog); intellectual disability (ortholog); Peripheral Nerve Injuries (ortholog); FOUND IN apical part of cell (ortholog); dendrite (ortholog) NW_004955421 12763432 12957852 - 102024015 AGCD01021928;AGCD01021929;AGCD01021930;AGCD01021931;AGCD01021932;AGCD01021933;GBDI01106875;XM_005383757;XM_005383758;XM_005383759;XM_005383760;XM_005383761;XM_013513790;XM_013513791;XM_013513792 XP_005383814;XP_005383815;XP_005383816;XP_005383817;XP_005383818;XP_013369244;XP_013369245;XP_013369246 MODEL 8805802 protein-coding Timp1 TIMP metallopeptidase inhibitor 1 ENCODES a protein that exhibits cytokine activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); peptidase inhibitor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to acetaldehyde (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); adult respiratory distress syndrome (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955516 507113 511360 - 102013747 AGCD01067385;GBCQ01096551;XM_005408935;XM_005408936;XM_013506915;XM_013506916 XP_005408992;XP_005408993;XP_013362369;XP_013362370 MODEL 39133817 misc_rna 7SK 7SK RNA 8994196 protein-coding Als2 alsin Rho guanine nucleotide exchange factor ALS2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); behavioral fear response (ortholog); endosomal transport (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 2 (ortholog); Amyotrophic Lateral Sclerosis, Autosomal Recessive (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955403 22449 104577 + 102016967 AGCD01001679;AGCD01001680;AGCD01001681;GBCQ01070450;XM_005373184;XM_005373185;XM_005373186;XM_013511695;XM_013511698 XP_005373241;XP_005373242;XP_005373243;XP_013367149;XP_013367152 MODEL 8881134 pseudo LOC102007124 allograft inflammatory factor 1 pseudogene NW_004955419 15234825 15235399 - 102007124 AGCD01020068;XR_260632 MODEL 39132396 snrna U6 U6 spliceosomal RNA 8955917 protein-coding Flot1 flotillin 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); caveola assembly (ortholog); ASSOCIATED WITH Q fever (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955583 717246 729924 - 102018347 AGCD01075855;AGCD01075856;AGCD01075857;GBDJ01001358;GBDK01004420;XM_005414316 XP_005414373 MODEL 8782102 protein-coding Arap2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog) NW_004955443 10537763 10719329 + 102012588 AGCD01038379;AGCD01038380;AGCD01038381;AGCD01038382;AGCD01038383;GBBH01146116;XM_005392016;XM_005392017;XM_005392018;XM_005392019;XM_013518104 XP_005392073;XP_005392074;XP_005392075;XP_005392076;XP_013373558 MODEL 8824239 protein-coding Tshz2 teashirt zinc finger homeobox 2 INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH COVID-19 (ortholog); syndromic microphthalmia 5 (ortholog) NW_004955445 5571587 5830728 - 102016322 AGCD01039472;AGCD01039473;AGCD01039474;AGCD01039475;GBDF01222748;XM_005392287 XP_005392344 MODEL 8978760 protein-coding Atrnl1 attractin like 1 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN melanocortin system pathway NW_004955431 19994365 20745018 + 102019096 AGCD01030460;AGCD01030461;AGCD01030462;AGCD01030463;AGCD01030464;AGCD01030465;AGCD01030466;AGCD01030467;AGCD01030468;AGCD01030469;AGCD01030470;AGCD01030471;AGCD01030472;AGCD01030473;AGCD01030474;AGCD01030475;AGCD01030476;AGCD01030477;AGCD01030478;AGCD01030479;AGCD01030480;AGCD01030481;AGCD01030482;GBBH01210686;GBDF01193111;XM_013515898 XP_013371352 MODEL 8729092 protein-coding Fap fibroblast activation protein alpha ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN endothelial cell migration (ortholog); melanocyte apoptotic process (ortholog); melanocyte proliferation (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN apical part of cell (ortholog); basal part of cell (ortholog); cell surface (ortholog) NW_004955449 11623838 11694256 + 102018450 AGCD01042092;GBCE01096662;XM_005393316 XP_005393373 MODEL 39133818 misc_rna 7SK 7SK RNA 8980830 protein-coding Plekhs1 pleckstrin homology domain containing S1 ASSOCIATED WITH disease of cellular proliferation (ortholog); glucose intolerance (ortholog); Insulin Resistance (ortholog) NW_004955431 18745990 18798517 + 102008969 AGCD01030434;AGCD01030435;GBDI01020069;XM_005387803;XM_013515824;XM_013515825;XM_013515826;XM_013515828;XM_013515829;XM_013515830;XM_013515831;XR_001234618;XR_001234619;XR_001234620;XR_001234621 XP_005387860;XP_013371278;XP_013371279;XP_013371280;XP_013371282;XP_013371283;XP_013371284;XP_013371285 MODEL 8807997 pseudo LOC102006081 26S protease regulatory subunit 4 pseudogene NW_004955444 10175071 10176371 - 102006081 AGCD01039007;XR_262256 MODEL 39133491 snrna U4 U4 spliceosomal RNA 8916092 protein-coding Irs4 insulin receptor substrate 4 PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); colorectal cancer (ortholog); congenital nongoitrous hypothyroidism 9 (ortholog) NW_004955490 7135969 7139802 + 102012544 AGCD01060248;XM_005404671;XM_005404672 XP_005404728;XP_005404729 MODEL 9007281 protein-coding Sft2d2 SFT2 domain containing 2 NW_004955462 8878387 8897523 - 102018369 AGCD01049329;AGCD01049330;AGCD01049331;GBDK01080878;XM_005398208 XP_005398265 MODEL 10210357 ncrna LOC106150118 uncharacterized LOC106150118 NW_004955465 1221181 1227027 + 106150118 AGCD01050338;XR_001236735;XR_001236736 MODEL 9003288 pseudo LOC102019742 U6 snRNA-associated Sm-like protein LSm5 pseudogene NW_004955442 5390882 5391207 + 102019742 AGCD01037557 MODEL 8881266 protein-coding Dnajc7 DnaJ heat shock protein family (Hsp40) member C7 ENCODES a protein that exhibits heat shock protein binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); epilepsy (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955451 16119737 16147308 - 102011832 AGCD01043655;AGCD01043656;GBCE01054611;XM_005394436;XM_005394437;XM_013519287;XM_013519288 XP_005394493;XP_005394494;XP_013374741;XP_013374742 MODEL 39131929 snrna U1 U1 spliceosomal RNA 8876248 protein-coding Echs1 enoyl-CoA hydratase, short chain 1 ENCODES a protein that exhibits 3-hydroxypropionyl-CoA dehydratase activity (ortholog); enoyl-CoA hydratase activity (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); L-valine catabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955477 11012451 11021487 - 102005467 AGCD01055713;GBBH01061217;XM_005402067;XM_005402068 XP_005402124;XP_005402125 MODEL 8951897 protein-coding Ptpn1 protein tyrosine phosphatase non-receptor type 1 ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to angiotensin (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); Calcification of Aortic Valve (ortholog); Carotid Artery Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); early endosome (ortholog) NW_004955445 7754313 7819229 - 102025630 AGCD01039551;AGCD01039552;GBDF01190580;XM_005392314;XM_005392315;XM_005392316 XP_005392371;XP_005392372;XP_005392373 MODEL 8815183 protein-coding LOC102017415 EF-hand calcium-binding domain-containing protein 12-like NW_004956316 420 4602 - 102017415 AGCD01079421;GBDF01124800;GBDJ01312072;XM_005415194 XP_005415251 MODEL 8952179 pseudo LOC102010899 dnaJ homolog subfamily B member 6-like NW_004955477 2188830 2190566 + 102010899 AGCD01055518;XR_263678 MODEL 9010106 protein-coding Timp2 TIMP metallopeptidase inhibitor 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); integrin binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of metallopeptidase activity (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); Brain Injuries (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); extracellular space (ortholog) NW_004955506 3769113 3812896 + 102029096 AGCD01065319;GBCE01002810;XM_005407364 XP_005407421 MODEL 8796651 trna Trnag-gcc transfer RNA glycine (anticodon GCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978844 AGCD01042230;AGCD01043711;AGCD01049456;AGCD01051475;AGCD01057629;AGCD01058153;AGCD01058182;AGCD01067339;AGCD01074351 MODEL 9021302 pseudo LOC102012551 leucine-rich repeat-containing protein 58 pseudogene NW_004955494 8245217 8247491 + 102012551 AGCD01061581 MODEL 8971569 protein-coding LOC102007129 cyclic nucleotide-binding domain-containing protein 2-like NW_004955488 6614698 6616169 - 102007129 AGCD01059662;XM_013504412 XP_013359866 MODEL 8786114 protein-coding Hexb hexosaminidase subunit beta ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-N-acetylglucosaminidase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); INVOLVED IN astrocyte cell migration (ortholog); chondroitin sulfate proteoglycan catabolic process (ortholog); dermatan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN acrosomal vesicle (ortholog); azurophil granule (ortholog); cortical granule (ortholog) NW_004955425 25942341 25961312 - 102029766 AGCD01025939;GBBH01000461;GBCE01003948;XM_005386061 XP_005386118 MODEL 8851175 protein-coding Gfra4 GDNF family receptor alpha 4 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); INVOLVED IN glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of ossification (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) NW_004955415 14513183 14514140 - 102027968 AGCD01016299;GBDI01221583;GBDJ01047888;XM_013512301 XP_013367755 MODEL 8826759 protein-coding Adck1 aarF domain containing kinase 1 INVOLVED IN negative regulation of mitochondrial fusion (ortholog); positive regulation of cristae formation (ortholog); FOUND IN mitochondrion (ortholog) NW_004955438 1638673 1760791 + 102019958 AGCD01034986;AGCD01034987;GBDF01291374;XM_005390216;XM_005390222;XM_013517182;XM_013517183;XM_013517184 XP_005390273;XP_005390279;XP_013372636;XP_013372637;XP_013372638 MODEL 39132171 rrna 5S_rRNA 5S ribosomal RNA 8816956 protein-coding LOC102024213 olfactory receptor 52A5-like NW_004955414 20781739 20782683 - 102024213 AGCD01015389;XM_005380067 XP_005380124 MODEL 8796460 protein-coding Far1 fatty acyl-CoA reductase 1 ENCODES a protein that exhibits alcohol-forming long-chain fatty acyl-CoA reductase activity (ortholog); alcohol-forming very long-chain fatty acyl-CoA reductase activity (ortholog); INVOLVED IN ether lipid biosynthetic process (ortholog); glycerophospholipid biosynthetic process (ortholog); long-chain fatty-acyl-CoA metabolic process (ortholog); ASSOCIATED WITH CATARACTS, SPASTIC PARAPARESIS, AND SPEECH DELAY (ortholog); genetic disease (ortholog); rhizomelic chondrodysplasia punctate type 4 (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955414 28938535 28996622 + 102020904 AGCD01015698;GBCB01059705;XM_005380328;XM_005380329;XM_013512007;XM_013512008;XM_013512009;XM_013512010;XM_013512011;XM_013512013 XP_005380385;XP_005380386;XP_013367461;XP_013367462;XP_013367463;XP_013367464;XP_013367465;XP_013367467 MODEL 8744266 ncrna LOC102012556 uncharacterized LOC102012556 NW_004955500 5638086 5640274 - 102012556 AGCD01063847;GBDF01250373;XR_264229 MODEL 39133492 snrna U4 U4 spliceosomal RNA 9051831 protein-coding Kit KIT proto-oncogene, receptor tyrosine kinase ENCODES a protein that exhibits cytokine binding (ortholog); protease binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell chemotaxis (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); cell-cell junction (ortholog) NW_004955447 16149014 16226151 - 102007952 AGCD01041077;GBDJ01350236;XM_013518572;XM_013518573;XM_013518575 XP_013374026;XP_013374027;XP_013374029 MODEL 9042344 protein-coding Rgs11 regulator of G protein signaling 11 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); ASSOCIATED WITH morphine dependence (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); dendrite terminus (ortholog) NW_004955442 16905982 16914772 + 102004206 AGCD01037922;AGCD01037923;GBDF01207822;XM_005391662;XM_005391663;XM_005391664;XM_005391665;XM_005391666 XP_005391719;XP_005391720;XP_005391721;XP_005391722;XP_005391723 MODEL 8720105 ncrna LOC102020031 uncharacterized LOC102020031 NW_004955501 3463765 3466302 + 102020031 AGCD01064105;GBDF01189492;XR_264251 MODEL 8965003 protein-coding Agr2 anterior gradient 2, protein disulphide isomerase family member ENCODES a protein that exhibits dystroglycan binding (ortholog); epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); digestive tract morphogenesis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); pancreatic ductal adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955410 19984768 19995446 - 102023236 AGCD01011039;AGCD01011040;GBDF01005562;XM_005377338;XM_005377339 XP_005377395;XP_005377396 MODEL 8839589 protein-coding Atat1 alpha tubulin acetyltransferase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); L-lysine N-acetyltransferase activity, acting on acetyl phosphate as donor (ortholog); tubulin N-acetyltransferase activity (ortholog); INVOLVED IN alpha-tubulin acetylation (ortholog); dentate gyrus development (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); High Myopia (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); microtubule bundle (ortholog) NW_004955583 643575 652393 + 102004437 AGCD01075844;AGCD01075845;GBCE01098162;GBCQ01099542;XM_013509800 XP_013365254 MODEL 39134089 misc_rna 7SK 7SK RNA 39132398 snrna U6 U6 spliceosomal RNA 8815764 protein-coding Cblif cobalamin binding intrinsic factor ENCODES a protein that exhibits cargo receptor ligand activity (ortholog); cobalamin binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN cobalamin transport (ortholog); ASSOCIATED WITH congenital intrinsic factor deficiency (ortholog); gastric ulcer (ortholog); gastritis (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); extracellular space (ortholog) NW_004955511 4234470 4251583 - 102013320 AGCD01066496;GBDI01027880;XM_005408068;XM_005408071;XM_005408072;XM_013506347;XM_013506348 XP_005408125;XP_005408128;XP_005408129;XP_013361801;XP_013361802 MODEL 8865674 pseudo LOC102012558 non-histone chromosomal protein HMG-17 pseudogene NW_004955426 25793912 25801578 + 102012558 AGCD01026728 MODEL 8762681 protein-coding LOC102005330 uncharacterized LOC102005330 NW_004955637 38088 43799 + 102005330 AGCD01077644;AGCD01077645;XM_005415045 XP_005415102 MODEL 39133819 misc_rna 7SK 7SK RNA 8834817 pseudo LOC102018166 serine-threonine kinase receptor-associated protein-like NW_004955409 35958599 35960059 + 102018166 AGCD01010437 MODEL 8795307 protein-coding Arap3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of Rac protein signal transduction (ortholog); negative regulation of Rho protein signal transduction (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog); ruffle (ortholog) NW_004955415 12098009 12121722 + 102003649 AGCD01016184;AGCD01016185;GBDK01075561;XM_005380719;XM_005380720;XM_005380721;XM_005380722;XM_013512253 XP_005380776;XP_005380777;XP_005380778;XP_005380779;XP_013367707 MODEL 8853523 ncrna LOC102012559 uncharacterized LOC102012559 NW_004955427 8687167 8694960 + 102012559 AGCD01027076;GBDF01110884;XR_001234415;XR_261242 MODEL 8898873 trna Trnag-ucc transfer RNA glycine (anticodon UCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955462;NW_004955467;NW_004955495 59658;14719232;8709239;4280962 59729;14719303;8709310;4281033 -;-;-;- 101978845 AGCD01049456;AGCD01051466;AGCD01061910;AGCD01074502 MODEL 9013605 ncrna LOC102021533 uncharacterized LOC102021533 NW_004955410 19329312 19334964 - 102021533 AGCD01011019;GBDK01421036;XR_259850 MODEL 8901930 pseudo LOC102015128 serologically defined colon cancer antigen 3 homolog pseudogene NW_004955425 3353423 3354425 + 102015128 AGCD01025288 MODEL 9029342 protein-coding Bmp7 bone morphogenetic protein 7 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN allantois development (ortholog); anatomical structure formation involved in morphogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Acute Otitis Media (ortholog); atrial heart septal defect 8 (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); vesicle (ortholog) NW_004955445 2154057 2235594 + 102006504 AGCD01039351;GBDK01182189;XM_005392260 XP_005392317 MODEL 10252589 protein-coding LOC106147148 uncharacterized LOC106147148 NW_004955523 2420415 2423013 + 106147148 AGCD01068579;AGCD01068580;GBDF01279201;XM_013507121 XP_013362575 MODEL 8836713 pseudo LOC102006086 diphosphoinositol polyphosphate phosphohydrolase 2 pseudogene NW_004955594 540020 541200 + 102006086 AGCD01076434 MODEL 10343555 ncrna LOC106150119 uncharacterized LOC106150119 NW_004955465 43436 122875 + 106150119 AGCD01050303;AGCD01050304;XR_001236737 MODEL 8971636 protein-coding Hormad1 HORMA domain containing 1 INVOLVED IN blastocyst development (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic cell cycle (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog); cytoplasm (ortholog) NW_004955413 130214 155381 + 102008836 AGCD01013438;AGCD01013439;AGCD01013440;GBDI01209109;XM_013511410;XM_013511411;XM_013511412;XR_001232970 XP_013366864;XP_013366865;XP_013366866 MODEL 39133493 snrna U4 U4 spliceosomal RNA 39131602 rrna 5S_rRNA 5S ribosomal RNA 8721913 protein-coding Far2 fatty acyl-CoA reductase 2 ENCODES a protein that exhibits alcohol-forming very long-chain fatty acyl-CoA reductase activity (ortholog); INVOLVED IN long-chain fatty-acyl-CoA metabolic process (ortholog); ASSOCIATED WITH alopecia (ortholog); dry eye syndrome (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955505 5585846 5724234 - 102015869 AGCD01065152;AGCD01065153;AGCD01065154;GBBH01106709;GBBH01112981;XM_013505936 XP_013361390 MODEL 8828127 ncrna LOC102010901 uncharacterized LOC102010901 NW_004955416 18447091 18476171 + 102010901 AGCD01017406;GBDF01227734;XR_260392 MODEL 8817033 protein-coding Bbs5 Bardet-Biedl syndrome 5 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 5 (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centriolar satellite (ortholog) NW_004955449 5043034 5061806 - 102028919 AGCD01041906;GBDF01089344;XM_005393261;XM_005393262 XP_005393318;XP_005393319 MODEL 9035655 pseudo LOC102022536 melanoma-associated antigen B10-like NW_004955531 3135227 3136118 - 102022536 AGCD01070062 MODEL 8861434 protein-coding Wdr86 WD repeat domain 86 NW_004955491 5739715 5765469 - 102008115 AGCD01060499;AGCD01060500;AGCD01060501;GBCE01031431;GBCQ01153453;XM_005404830 XP_005404887 MODEL 8979047 protein-coding Plet1 placenta expressed transcript 1 INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); positive regulation of cell migration (ortholog); wound healing, spreading of epidermal cells (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog) NW_004955412 13902940 13912761 - 102030508 AGCD01012847;GBDJ01016895;XM_005378121 XP_005378178 MODEL 8916651 protein-coding Gpr107 G protein-coupled receptor 107 ENCODES a protein that exhibits clathrin heavy chain binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog) NW_004955513 176806 233708 + 102014595 AGCD01066817;GBDF01089101;XM_005408338 XP_005408395 MODEL 39131471 protein-coding IRX1 iroquois homeobox 1 8731927 protein-coding Sft2d3 SFT2 domain containing 3 NW_004955459 2842452 2845045 - 102026837 AGCD01048003;GBDI01227745;XM_005397594 XP_005397651 MODEL 9048353 protein-coding LOC102003603 polyadenylate-binding protein 1-like 2 NW_004955591 918513 919451 - 102003603 AGCD01076286;XM_005414600 XP_005414657 MODEL 8978359 protein-coding LOC102010109 olfactory receptor 1D2-like NW_004955580 1150676 1151682 - 102010109 AGCD01075649;XM_005414224 XP_005414281 MODEL 8867541 protein-coding Als2cl ALS2 C-terminal like ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955420 25440641 25455872 + 102021671 AGCD01021358;GBBH01165303;XM_005383428;XM_005383430;XM_005383431;XM_005383433;XM_013513492 XP_005383485;XP_005383487;XP_005383488;XP_005383490;XP_013368946 MODEL 39133579 snrna U2 U2 spliceosomal RNA 8724846 protein-coding Flot2 flotillin 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); negative regulation of amyloid precursor protein catabolic process (ortholog); negative regulation of gene expression (ortholog); FOUND IN acrosomal membrane (ortholog); adherens junction (ortholog); apical plasma membrane (ortholog) NW_004955481 4276847 4298523 + 102018287 AGCD01056933;GBBH01061429;XM_005402703;XM_005402704;XM_005402705;XM_005402707;XM_013503420 XP_005402760;XP_005402761;XP_005402762;XP_005402764;XP_013358874 MODEL 8887224 ncrna LOC102017419 uncharacterized LOC102017419 NW_004955453 8552259 8553217 + 102017419 AGCD01044765;XR_262723 MODEL 39134403 misc_rna 7SK 7SK RNA 8938524 protein-coding Eci1 enoyl-CoA delta isomerase 1 ENCODES a protein that exhibits delta(3)-delta(2)-enoyl-CoA isomerase activity (ortholog); identical protein binding (ortholog); intramolecular oxidoreductase activity, transposing C=C bonds (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); FOUND IN mitochondrion (ortholog) NW_004955442 15010412 15027014 + 102025730 AGCD01037854;GBDK01024970;XM_005391434 XP_005391491 MODEL 8944397 protein-coding Agrn agrin ENCODES a protein that exhibits acetylcholine receptor regulator activity (ortholog); ATPase inhibitor activity (ortholog); BMP binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 8 (ortholog); FOUND IN basement membrane; axonal growth cone (ortholog); cell surface (ortholog) NW_004955486 9674103 9704994 - 102029867 AGCD01059195;GBCQ01009261;GBDK01013959;XM_013504201 XP_013359655 MODEL 8904119 protein-coding Atrx ATRX chromatin remodeler ENCODES a protein that exhibits chromatin binding (ortholog); chromo shadow domain binding (ortholog); DNA translocase activity (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adrenocortical carcinoma (ortholog); alpha thalassemia-X-linked intellectual disability syndrome (ortholog); FOUND IN chromosome, subtelomeric region (ortholog); chromosome, telomeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955557 947368 1252701 - 102019208 AGCD01073270;AGCD01073271;AGCD01073272;AGCD01073273;AGCD01073274;AGCD01073275;AGCD01073276;AGCD01073277;AGCD01073278;AGCD01073279;AGCD01073280;AGCD01073281;AGCD01073282;AGCD01073283;GBDK01278909;XM_005412622;XM_013508821;XM_013508822;XM_013508823;XM_013508824;XM_013508825 XP_005412679;XP_013364275;XP_013364276;XP_013364277;XP_013364278;XP_013364279 MODEL 8904550 protein-coding Atcay ATCAY kinesin light chain interacting caytaxin ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN mitochondrion distribution (ortholog); negative regulation of glutamate metabolic process (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Ataxia (ortholog); Cayman type cerebellar ataxia (ortholog); cerebellar ataxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955495 5715943 5741202 + 102009730 AGCD01062022;AGCD01062023;AGCD01062024;GBBH01066796;XM_013505239;XM_013505240 XP_013360693;XP_013360694 MODEL 8988144 ncrna LOC102005333 uncharacterized LOC102005333 NW_004955452 11263904 11270100 + 102005333 AGCD01044333;GBDJ01321809;XR_001236063;XR_262678 MODEL 8716577 protein-coding Gfral GDNF family receptor alpha like ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN GDF15-GFRAL signaling pathway (ortholog); negative regulation of appetite (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); FOUND IN plasma membrane (ortholog) NW_004955411 903001 952750 - 102007749 AGCD01011468;AGCD01011469;GBDF01165025;XM_005377916 XP_005377973 MODEL 9050197 protein-coding Traf7 TNF receptor associated factor 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to interleukin-6 (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenomatoid tumor (ortholog); Cardiac, Facial, and Digital Anomalies with Developmental Delay (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955442 15092955 15112842 - 102030352 AGCD01037859;GBDJ01229191;XM_005391453;XM_013517736;XM_013517737;XM_013517738;XM_013517739 XP_005391510;XP_013373190;XP_013373191;XP_013373192;XP_013373193 MODEL 39133820 misc_rna 7SK 7SK RNA 8764680 protein-coding LOC102024218 olfactory receptor 1468-like NW_004955473 3518681 3519637 - 102024218 AGCD01053934;XM_005401293 XP_005401350 MODEL 8703642 protein-coding Hexd hexosaminidase D ENCODES a protein that exhibits beta-N-acetylhexosaminidase activity (ortholog); hexosaminidase activity (ortholog); FOUND IN cytoplasm (ortholog); extracellular vesicle (ortholog); nucleus (ortholog) NW_004955506 702828 719733 - 102008874 AGCD01065234;GBDJ01234157;XM_005407196;XM_013506081;XM_013506082;XM_013506083;XM_013506084 XP_005407253;XP_013361535;XP_013361536;XP_013361537;XP_013361538 MODEL 8840638 protein-coding Adck2 aarF domain containing kinase 2 INVOLVED IN regulation of ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH mitochondrial myopathy (ortholog); FOUND IN mitochondrion (ortholog) NW_004955494 2736466 2745491 - 102007670 AGCD01061448;GBCB01025083;GBCE01137623;XM_005405535 XP_005405592 MODEL 8806919 protein-coding LOC102019743 olfactory receptor 4K13-like NW_004955550 225493 226434 - 102019743 AGCD01072488;XM_005412128 XP_005412185 MODEL 8823398 protein-coding LOC102015135 olfactory receptor 8K3-like NW_004955511 1157886 1158833 + 102015135 AGCD01066358;XM_005408224 XP_005408281 MODEL 8969445 protein-coding Dnajc8 DnaJ heat shock protein family (Hsp40) member C8 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 7347533 7369724 - 102013577 AGCD01044145;AGCD01044146;AGCD01044147;GBCQ01005843;XM_005394944 XP_005395001 MODEL 8823269 protein-coding Bmpr1a bone morphogenetic protein receptor type 1A ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); anti-Mullerian hormone receptor signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ortholog); breast cancer (ortholog); chromosome 10q23 deletion syndrome (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955510 5812571 5936312 + 102011346 AGCD01066293;AGCD01066294;AGCD01066295;AGCD01066296;AGCD01066297;GBBH01207322;GBBH01207324;XM_005407907 XP_005407964 MODEL 10381714 ncrna LOC106150120 uncharacterized LOC106150120 NW_004955465 6956471 6961793 + 106150120 AGCD01050449;XR_001236738;XR_001236739 MODEL 8963976 protein-coding Rgs12 regulator of G protein signaling 12 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); GTPase regulator activity (ortholog); INVOLVED IN negative regulation of G protein-coupled receptor signaling pathway (ortholog); termination of G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; G protein mediated signaling pathway via Galpha12/Galpha13 family; ASSOCIATED WITH schizophrenia (ortholog); FOUND IN apical dendrite (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955514 2081575 2154414 + 102006701 AGCD01067072;AGCD01067073;AGCD01067074;GBBH01064970;GBDF01306453;XM_013506795 XP_013362249 MODEL 9059933 protein-coding Tshz3 teashirt zinc finger homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); kidney morphogenesis (ortholog); kidney smooth muscle cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); CAKUT (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN growth cone (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955468 6448167 6669706 + 102006647 AGCD01051985;AGCD01051986;AGCD01051987;AGCD01051988;GBDJ01311365;XM_005400095;XR_263394 XP_005400152 MODEL 8891653 protein-coding Pdzd4 PDZ domain containing 4 ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); intellectual disability (ortholog) NW_004955580 512963 535911 - 102019753 AGCD01075607;AGCD01075608;GBDJ01144360;XM_005414155;XM_005414156;XM_005414157 XP_005414212;XP_005414213;XP_005414214 MODEL 8915500 protein-coding Hormad2 HORMA domain containing 2 INVOLVED IN meiotic cell cycle (ortholog); meiotic sister chromatid cohesion (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 4309397 4462932 + 102015602 AGCD01045673;AGCD01045674;GBDF01004452;XM_005396240;XM_005396241;XM_005396242;XM_005396243;XM_013520487 XP_005396297;XP_005396298;XP_005396299;XP_005396300;XP_013375941 MODEL 8742801 protein-coding Cbll1 Cbl proto-oncogene like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); mRNA processing (ortholog); negative regulation of cell adhesion (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955410 12078448 12093641 + 102006988 AGCD01010844;GBDF01189707;XM_005377287;XM_005377288;XM_013510644;XM_013510645 XP_005377344;XP_005377345;XP_013366098;XP_013366099 MODEL 8951238 ncrna LOC102007135 uncharacterized LOC102007135 NW_004955425 7696784 7698489 - 102007135 AGCD01025391;XR_261135 MODEL 39131603 rrna 5S_rRNA 5S ribosomal RNA 8810062 ncrna LOC102018169 uncharacterized LOC102018169 NW_004955411 3795767 3797434 - 102018169 AGCD01011556;XR_259914 MODEL 39132173 rrna 5S_rRNA 5S ribosomal RNA 8915544 protein-coding Chlsn cholesin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN negative regulation of cholesterol biosynthetic process (ortholog); FOUND IN extracellular space (ortholog) NW_004955460 8714109 8839162 - 102015813 AGCD01048531;AGCD01048532;GBDF01125762;XM_005397799;XM_013521224;XM_013521225 XP_005397856;XP_013376678;XP_013376679 MODEL 8885766 protein-coding Wdr88 WD repeat domain 88 NW_004955468 551574 563630 + 102015187 AGCD01051712;GBDF01088193;XM_013522282 XP_013377736 MODEL 8950912 protein-coding Bbs7 Bardet-Biedl syndrome 7 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN brain development (ortholog); eye development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/7, Digenic (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centrosome (ortholog) NW_004955428 18682072 18724560 + 102017686 AGCD01028069;GBDF01123997;XM_005386780;XM_005386781;XM_013515309;XM_013515310 XP_005386837;XP_005386838;XP_013370763;XP_013370764 MODEL 8844985 pseudo LOC102012564 zinc finger CCHC domain-containing protein 9-like NW_004955506 4557255 4572734 + 102012564 AGCD01065339;AGCD01065340 MODEL 10236556 ncrna LOC106147149 uncharacterized LOC106147149 NW_004955408 24614177 24622117 - 106147149 AGCD01008621;GBDF01211538;XR_001231920 MODEL 8962937 ncrna LOC102024219 uncharacterized LOC102024219 NW_004955415 11233747 11246572 - 102024219 AGCD01016154;GBDK01311887;XR_001233240 MODEL 8852395 protein-coding LOC102006087 vegetative cell wall protein gp1-like NW_004955450 9118960 9126357 + 102006087 AGCD01042585;GBBH01149209;XM_013518830 XP_013374284 MODEL 39133821 misc_rna 7SK 7SK RNA 8703700 protein-coding Ptpn11 protein tyrosine phosphatase non-receptor type 11 ENCODES a protein that exhibits cadherin binding (ortholog); cell adhesion molecule binding (ortholog); D1 dopamine receptor binding (ortholog); INVOLVED IN atrioventricular canal development (ortholog); axonogenesis (ortholog); Bergmann glial cell differentiation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955482 8934734 9031230 + 102009502 AGCD01057558;AGCD01057559;AGCD01057560;GBDF01081705;XM_005403196;XM_005403197;XM_005403198;XM_013503715;XM_013503717 XP_005403253;XP_005403254;XP_005403255;XP_013359169;XP_013359171 MODEL 8815586 protein-coding Gpr108 G protein-coupled receptor 108 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of toll-like receptor signaling pathway (ortholog); protein catabolic process (ortholog); FOUND IN cis-Golgi network membrane (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955495 2782549 2789470 + 102006146 AGCD01061799;GBDJ01001980;XM_005405699;XM_013505199;XM_013505200;XM_013505201;XM_013505202;XM_013505203 XP_005405756;XP_013360653;XP_013360654;XP_013360655;XP_013360656;XP_013360657 MODEL 39134090 misc_rna 7SK 7SK RNA 39132399 snrna U6 U6 spliceosomal RNA 9049316 protein-coding Tubb tubulin beta class I ENCODES a protein that exhibits GTPase activating protein binding (ortholog); MHC class I protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN microtubule-based process (ortholog); odontoblast differentiation (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 6 (ortholog); congenital fibrosis of the extraocular muscles (ortholog); congenital symmetric circumferential skin creases 1 (ortholog); FOUND IN cell body (ortholog); ciliary tip (ortholog); cilium (ortholog) NW_004955583 704811 715742 + 102018665 AGCD01075853;AGCD01075854;AGCD01075855;GBCE01002225;GBDJ01017686;XM_005414317 XP_005414374 MODEL 8887793 protein-coding Timp3 TIMP metallopeptidase inhibitor 3 INVOLVED IN cellular response to hypoxia (ortholog); cellular response to interleukin-6 (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH asthma (ortholog); bladder disease (ortholog); breast cancer (ortholog); FOUND IN basement membrane (ortholog) NW_004955405 41613976 41655813 + 102003311 AGCD01005557;GBCE01004412;XM_005374652 XP_005374709 MODEL 39133494 snrna U4 U4 spliceosomal RNA 39131401 protein-coding ALX1 ALX homeobox 1 9027258 pseudo LOC102010903 60S ribosomal protein L18a pseudogene NW_004955481 3813679 3814552 + 102010903 AGCD01056916 MODEL 39134404 misc_rna 7SK 7SK RNA 8783819 protein-coding Flrt1 fibronectin leucine rich transmembrane protein 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN dendrite development (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); neuron projection extension (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasmic vesicle (ortholog); extracellular space (ortholog) NW_004955422 20944875 20958618 - 102022396 AGCD01023098;GBBH01221857;XM_005384646;XM_005384647;XM_005384648 XP_005384703;XP_005384704;XP_005384705 MODEL 8844858 protein-coding Eci2 enoyl-CoA delta isomerase 2 ENCODES a protein that exhibits delta(3)-delta(2)-enoyl-CoA isomerase activity (ortholog); intramolecular oxidoreductase activity, transposing C=C bonds (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); fatty acid catabolic process (ortholog); FOUND IN mitochondrion (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955465 9297794 9314409 + 102011850 AGCD01050489;GBDF01083468;XM_005398889;XM_005398891;XM_013521837 XP_005398946;XP_005398948;XP_013377291 MODEL 8708051 ncrna LOC102022541 uncharacterized LOC102022541 NW_004955538 1159133 1176031 - 102022541 AGCD01071047;AGCD01071048;AGCD01071049;AGCD01071050;GBDF01044132;XR_001232085;XR_001232086;XR_264795 MODEL 9018057 protein-coding Plg plasminogen ENCODES a protein that exhibits apolipoprotein binding (ortholog); endopeptidase activity (ortholog); enzyme binding (ortholog); INVOLVED IN blood coagulation (ortholog); collagen catabolic process (ortholog); extracellular matrix disassembly (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); atypical hemolytic-uremic syndrome (ortholog); C1 inhibitor deficiency (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955439 20317814 20366724 + 102011248 AGCD01036109;AGCD01036110;AGCD01036111;GBDI01245139;XM_005390699;XM_005390700 XP_005390756;XP_005390757 MODEL 8975644 pseudo LOC102021534 protein archease pseudogene NW_004955463 5982003 5982507 - 102021534 AGCD01049652 MODEL 8813340 pseudo LOC102005334 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial pseudogene NW_004955453 2433189 2438637 - 102005334 AGCD01044629 MODEL 39132175 rrna 5S_rRNA 5S ribosomal RNA 8709322 protein-coding Kitlg KIT ligand INVOLVED IN embryonic hemopoiesis (ortholog); male gonad development (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autosomal dominant nonsyndromic deafness 69 (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); filopodium (ortholog); lamellipodium (ortholog) NW_004955405 25816137 25969006 - 102012494 AGCD01005186;AGCD01005187;AGCD01005188;AGCD01005189;AGCD01005190;AGCD01005191;AGCD01005192;GBDJ01354458;XM_005374430;XM_005374432;XM_013518150;XM_013518152;XR_001235502 XP_005374487;XP_005374489;XP_013373604;XP_013373606 MODEL 8808022 protein-coding Gfus GDP-L-fucose synthase ENCODES a protein that exhibits GDP-L-fucose synthase activity (ortholog); GDP-mannose 3,5-epimerase activity (ortholog); identical protein binding (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); positive regulation of endothelial cell migration (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; FOUND IN cytosol (ortholog) NW_004955454 2313172 2317829 - 102007733 AGCD01045015;GBDI01063386;XM_005395789;XM_005395790;XM_013520039 XP_005395846;XP_005395847;XP_013375493 MODEL 8798102 protein-coding LOC102003605 protein FAM127A NW_004955602 144599 145888 + 102003605 AGCD01076763;AGCD01076764;GBBH01002232;GBCQ01009918;XM_005414828 XP_005414885 MODEL 9023398 protein-coding Bbs9 Bardet-Biedl syndrome 9 INVOLVED IN cilium assembly (ortholog); fat cell differentiation (ortholog); protein localization to cilium (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 9 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); ciliary membrane (ortholog) NW_004955582 222926 628514 + 102007287 AGCD01075751;AGCD01075752;AGCD01075753;AGCD01075754;AGCD01075755;AGCD01075756;AGCD01075757;AGCD01075758;AGCD01075759;AGCD01075760;AGCD01075761;AGCD01075762;AGCD01075763;AGCD01075764;AGCD01075765;AGCD01075766;AGCD01075767;AGCD01075768;AGCD01075769;AGCD01075770;GBCE01018725;GBDF01162296;XM_013509769 XP_013365223 MODEL 8724114 protein-coding LOC102019745 beta-crystallin B2 NW_004955442 19887415 19891508 - 102019745 AGCD01038080;GBDK01038850;XM_013517684 XP_013373138 MODEL 39134091 misc_rna 7SK 7SK RNA 8996427 protein-coding Ptpn12 protein tyrosine phosphatase non-receptor type 12 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytosol (ortholog); podosome (ortholog) NW_004955410 7556283 7599170 - 102011513 AGCD01010719;AGCD01010720;GBBH01228182;XM_005377213 XP_005377270 MODEL 8703813 protein-coding Bmpr1b bone morphogenetic protein receptor type 1B ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acromesomelic dysplasia 3 (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog); asthma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955405 5408171 5784930 + 102013791 AGCD01004682;AGCD01004683;AGCD01004684;AGCD01004685;AGCD01004686;AGCD01004687;GBDI01326385;XM_013517414;XM_013517415;XM_013517416;XM_013517418;XM_013517428;XM_013517431;XM_013517434;XM_013517436;XM_013517437 XP_013372868;XP_013372869;XP_013372870;XP_013372872;XP_013372882;XP_013372885;XP_013372888;XP_013372890;XP_013372891 MODEL 8925671 protein-coding Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); postsynaptic actin cytoskeleton organization (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); substance-related disorder (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955404 12050225 12316842 - 102016775 AGCD01003450;AGCD01003451;AGCD01003452;AGCD01003453;GBDJ01089937;XM_005374078;XM_005374079;XM_005374081;XM_013516119 XP_005374135;XP_005374136;XP_005374138;XP_013371573 MODEL 15036843 trna Trnah-aug transfer RNA histidine(anticodon AUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978820 9037106 protein-coding Arb2a ARB2 cotranscriptional regulator A INVOLVED IN neural crest cell development (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955418 18213824 18624082 + 102021346 AGCD01019165;AGCD01019166;AGCD01019167;AGCD01019168;AGCD01019169;AGCD01019170;AGCD01019171;AGCD01019172;AGCD01019173;AGCD01019174;AGCD01019175;AGCD01019176;GBDF01219960;XM_005382263;XM_005382264;XM_005382265;XM_005382267;XM_013512944;XM_013512945;XM_013512947;XM_013512948;XM_013512949;XM_013512950;XM_013512951 XP_005382320;XP_005382321;XP_005382322;XP_005382324;XP_013368398;XP_013368399;XP_013368401;XP_013368402;XP_013368403;XP_013368404;XP_013368405 MODEL 8885043 protein-coding Irx1 iroquois homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN metanephros development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); congenital heart disease (ortholog); congestive heart failure (ortholog) NW_004955504 2072540 2099781 + 102022205 AGCD01064854;AGCD01064855;GBDK01079393;XM_013505917 XP_013361371 MODEL 8829452 protein-coding Atxn1 ataxin 1 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); poly(G) binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); brain development (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); neurodegenerative disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear inclusion body (ortholog) NW_004955483 9159877 9559453 + 102026869 AGCD01057857;AGCD01057858;AGCD01057859;AGCD01057860;AGCD01057861;GBDK01169335;XM_013503811;XM_013503812;XM_013503813;XM_013503814;XM_013503815;XM_013503816;XM_013503817;XR_001231022;XR_001231023 XP_013359265;XP_013359266;XP_013359267;XP_013359268;XP_013359269;XP_013359270;XP_013359271 MODEL 8759972 protein-coding LOC102020035 OX-2 membrane glycoprotein-like NW_004955427 12675014 12701762 + 102020035 AGCD01027222;AGCD01027223;AGCD01027224;GBCE01075627;XM_013515211;XM_013515212 XP_013370665;XP_013370666 MODEL 8959521 protein-coding Sfta2 surfactant associated 2 NW_004955583 865226 866360 - 102022442 AGCD01075871;GBDK01021573;XM_005414328 XP_005414385 MODEL 9031176 protein-coding LOC102010909 zinc finger protein 621 NW_004955420 29420972 29427337 - 102010909 AGCD01021500;GBDF01074480;XM_005383573;XM_005383574;XM_013513402;XM_013513403;XM_013513404;XM_013513405;XM_013513406;XM_013513407 XP_005383630;XP_005383631;XP_013368856;XP_013368857;XP_013368858;XP_013368859;XP_013368860;XP_013368861 MODEL 8713916 protein-coding Trafd1 TRAF-type zinc finger domain containing 1 INVOLVED IN negative regulation of innate immune response (ortholog); response to cytokine (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955482 8693323 8710226 + 102007771 AGCD01057549;AGCD01057550;GBCB01077429;GBDF01048404;XM_005403189 XP_005403246 MODEL 8876523 protein-coding Ecm1 extracellular matrix protein 1 ENCODES a protein that exhibits interleukin-2 receptor binding (ortholog); protease binding (ortholog); INVOLVED IN chondrocyte development (ortholog); endochondral bone growth (ortholog); inflammatory response (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular space (ortholog) NW_004955413 293295 299293 - 102011295 AGCD01013457;GBCE01028891;XM_005378672;XM_005378673;XM_005378675;XM_013511471 XP_005378729;XP_005378730;XP_005378732;XP_013366925 MODEL 8834627 ncrna LOC102012565 uncharacterized LOC102012565 NW_004955507 4294100 4350414 + 102012565 AGCD01065647;AGCD01065648;GBDF01133790;XR_001231617;XR_264382 MODEL 8862045 protein-coding Adck5 aarF domain containing kinase 5 FOUND IN mitochondrion (ortholog) NW_004955454 3006851 3024430 + 102004555 AGCD01045047;AGCD01045048;GBDI01295068;XM_005395881;XM_005395882;XM_013520177 XP_005395938;XP_005395939;XP_013375631 MODEL 8929939 protein-coding Hey1 hes related family bHLH transcription factor with YRPW motif 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior axis specification (ortholog); aortic valve morphogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway; altered Notch signaling pathway involving promoters; Notch signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955444 1498444 1502099 + 102008781 AGCD01038727;AGCD01038728;GBDK01407482;XM_005392194 XP_005392251 MODEL 39133583 snrna U2 U2 spliceosomal RNA 8845882 protein-coding LOC102021537 heterogeneous nuclear ribonucleoprotein M-like NW_004955465 3678561 3680629 - 102021537 AGCD01050388;XM_013521806 XP_013377260 MODEL 9020108 pseudo LOC102017421 glycerol kinase pseudogene NW_004955406 10336361 10338349 - 102017421 AGCD01005856;XM_005374816 MODEL 9044756 protein-coding Dnajc9 DnaJ heat shock protein family (Hsp40) member C9 ENCODES a protein that exhibits heat shock protein binding (ortholog); histone binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN nucleosome assembly (ortholog); positive regulation of ATP-dependent activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955437 18485975 18491561 + 102021176 AGCD01034793;AGCD01034794;AGCD01034795;GBDI01292088;XM_005389988 XP_005390045 MODEL 8971448 protein-coding Tsks testis specific serine kinase substrate ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN centriole (ortholog) NW_004955559 1151247 1162856 + 102004756 AGCD01073632;GBCE01108010;XM_005412834;XM_005412835;XM_005412836;XM_005412837;XM_005412838;XM_005412839;XM_005412840;XM_005412841;XM_005412843;XM_005412845 XP_005412891;XP_005412892;XP_005412893;XP_005412894;XP_005412895;XP_005412896;XP_005412897;XP_005412898;XP_005412900;XP_005412902 MODEL 39133495 snrna U4 U4 spliceosomal RNA 9034290 protein-coding Agrp agouti related neuropeptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); receptor antagonist activity (ortholog); INVOLVED IN adult feeding behavior (ortholog); circadian rhythm (ortholog); eating behavior (ortholog); PARTICIPATES IN altered melanocortin system pathway; melanocortin system pathway; obesity pathway; ASSOCIATED WITH Hyperphagia (ortholog); obesity (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN extracellular space (ortholog); Golgi lumen (ortholog); neuronal cell body (ortholog) NW_004955484 9165120 9166789 + 102030198 AGCD01058412;XM_005403647 XP_005403704 MODEL 8906559 protein-coding LOC102019754 disintegrin and metalloproteinase domain-containing protein 21-like NW_004955402 1994589 1997255 - 102019754 AGCD01000065;GBDF01010897;XM_005372587 XP_005372644 MODEL 8912420 protein-coding Hoxa1 homeobox A1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN abducens nerve formation (ortholog); anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); ASSOCIATED WITH Athabaskan brainstem dysgenesis syndrome (ortholog); autistic disorder (ortholog); congenital heart disease (ortholog) NW_004955410 28788245 28790971 - 102030160 AGCD01011259;GBCQ01023296;XM_005377446;XM_005377447 XP_005377503;XP_005377504 MODEL 8707171 pseudo LOC102007137 glucose-6-phosphatase 3 pseudogene NW_004955503 444692 461910 + 102007137 AGCD01064504 MODEL 8968169 protein-coding LOC102010112 small proline-rich protein 2F-like NW_004955592 331537 332801 + 102010112 AGCD01076304;GBDI01097716;XM_005414612 XP_005414669 MODEL 8867776 protein-coding Flrt2 fibronectin leucine rich transmembrane protein 2 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); basement membrane organization (ortholog); cell adhesion involved in heart morphogenesis (ortholog); FOUND IN cell-cell junction (ortholog); extracellular space (ortholog); focal adhesion (ortholog) NW_004955438 8565319 8656195 + 102029008 AGCD01035161;AGCD01035162;GBCE01053936;XM_005390242;XM_005390243;XM_005390244;XM_005390246;XM_013517210;XM_013517211;XM_013517212;XM_013517213 XP_005390299;XP_005390300;XP_005390301;XP_005390303;XP_013372664;XP_013372665;XP_013372666;XP_013372667 MODEL 8709129 protein-coding Wdr89 WD repeat domain 89 INVOLVED IN corpus callosum development (ortholog); ventricular system development (ortholog) NW_004955466 6171553 6204818 + 102007319 AGCD01050912;AGCD01050913;AGCD01050914;GBDF01276584;XM_005399148;XM_005399149;XM_005399150;XM_005399151;XM_013522006;XM_013522007 XP_005399205;XP_005399206;XP_005399207;XP_005399208;XP_013377460;XP_013377461 MODEL 8975645 protein-coding Irx2 iroquois homeobox 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN metanephros development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); proximal/distal pattern formation involved in metanephric nephron development (ortholog); ASSOCIATED WITH lung disease (ortholog) NW_004955504 1456433 1460996 - 102021578 AGCD01064838;GBDI01138111;GBDK01079388;XM_005415306 XP_005415363 MODEL 8744019 protein-coding LOC102006090 neutrophil cationic peptide 2-like NW_004955403 53736552 53738672 + 102006090 AGCD01003071;GBDF01020160;XM_005373838 XP_005373895 MODEL 8801126 protein-coding Gpr119 G protein-coupled receptor 119 ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); INVOLVED IN insulin secretion (ortholog); FOUND IN receptor complex (ortholog) NW_004955473 4686225 4687232 + 102006655 AGCD01053957;XM_005401235 XP_005401292 MODEL 9044015 protein-coding Rgs13 regulator of G protein signaling 13 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955406 30111770 30134605 + 102017840 AGCD01006358;AGCD01006359;GBDI01160957;XM_005375099;XM_005375100;XM_013521830 XP_005375156;XP_005375157;XP_013377284 MODEL 8949240 protein-coding Pdzd7 PDZ domain containing 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN auditory receptor cell development (ortholog); auditory receptor cell stereocilium organization (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 57 (ortholog); fundus dystrophy (ortholog); FOUND IN cilium (ortholog); nucleus (ortholog); stereocilia ankle link (ortholog) NW_004955485 9166721 9183129 + 102004167 AGCD01058750;GBCE01166839;GBDJ01214323;XM_013504049;XM_013504050;XM_013504051;XR_001231080 XP_013359503;XP_013359504;XP_013359505 MODEL 8708639 protein-coding Tubb1 tubulin beta 1 class VI ENCODES a protein that exhibits structural constituent of cytoskeleton (ortholog); INVOLVED IN microtubule polymerization (ortholog); microtubule-based process (ortholog); platelet aggregation (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; tyrosinemia type III pathway; vinblastine pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autosomal dominant isolated macrothrombocytopenia 1 (ortholog); congenital hypothyroidism (ortholog); FOUND IN ciliary tip (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955445 569504 576129 - 102019117 AGCD01039320;GBDJ01340647;XM_005392213 XP_005392270 MODEL 39131604 rrna 5S_rRNA 5S ribosomal RNA 8709367 protein-coding Alx3 ALX homeobox 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); embryonic hindlimb morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH frontonasal dysplasia (ortholog); frontonasal dysplasia 1 (ortholog); genetic disease (ortholog) NW_004955435 13584129 13594316 - 102015236 AGCD01033205;GBDF01222447;XM_005388911 XP_005388968 MODEL 39134405 misc_rna 7SK 7SK RNA 8808194 protein-coding Ate1 arginyltransferase 1 ENCODES a protein that exhibits arginyl-tRNA--protein transferase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); protein arginylation (ortholog); response to oxidative stress (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955477 126626 281898 - 102013604 AGCD01055479;AGCD01055480;AGCD01055481;AGCD01055482;AGCD01055483;AGCD01055484;AGCD01055485;GBBH01101397;XM_005401911;XM_005401912;XM_005401913;XM_005401914;XM_005401915;XM_005401916 XP_005401968;XP_005401969;XP_005401970;XP_005401971;XP_005401972;XP_005401973 MODEL 8707995 protein-coding LOC102018173 protein SPT2 homolog NW_004955412 18553976 18555107 + 102018173 AGCD01012944;AGCD01012945;GBDF01021744;XM_013510975 XP_013366429 MODEL 8959528 protein-coding LOC102022542 uncharacterized protein DDB_G0290301-like NW_004955539 3415874 3417143 + 102022542 AGCD01071252;GBDF01156883;XM_005410907 XP_005410964 MODEL 8829580 trna Trnah-gug transfer RNA histidine(anticodon GUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955409;NW_004955434;NW_004955409;NW_004955409 58646;8201309;17523204;8203034;8201874 58717;8201380;17523275;8203105;8201945 -;-;-;+;+ 101978821 AGCD01009385;AGCD01032537;AGCD01074502 MODEL 8842591 protein-coding Chm CHM Rab escort protein ENCODES a protein that exhibits protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN blood vessel development (ortholog); protein geranylgeranylation (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH Choroideremia (ortholog); Eye Abnormalities (ortholog); fundus dystrophy (ortholog); FOUND IN cytosol (ortholog); Rab-protein geranylgeranyltransferase complex (ortholog) NW_004955525 359393 563930 - 102017270 AGCD01068997;AGCD01068998;AGCD01068999;AGCD01069000;AGCD01069001;GBDI01106223;XM_005409721;XR_001231961 XP_005409778 MODEL 8974532 protein-coding Plgrkt plasminogen receptor with a C-terminal lysine INVOLVED IN positive regulation of plasminogen activation (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) NW_004955434 9424793 9468055 - 102030660 AGCD01032301;AGCD01032302;AGCD01032303;GBDJ01355387;XM_005388659 XP_005388716 MODEL 39132177 rrna 5S_rRNA 5S ribosomal RNA 39132400 snrna U6 U6 spliceosomal RNA 8710064 protein-coding Arc activity regulated cytoskeleton associated protein ENCODES a protein that exhibits mRNA binding (ortholog); structural molecule activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); endoderm development (ortholog); learning (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcoholic Intoxication (ortholog); Alzheimer's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955454 1379998 1383414 - 102018684 AGCD01044968;GBDJ01389179;XM_005395731 XP_005395788 MODEL 10340643 ncrna LOC106150121 uncharacterized LOC106150121 NW_004955465 3863104 3865488 + 106150121 AGCD01050394;GBDF01158466;XR_001236740 MODEL 9062035 protein-coding Hoxa10 homeobox A10 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); male gonad development (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Endometrial Neoplasms (ortholog); Female Urogenital Diseases (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955410 28864785 28874454 - 102006007 AGCD01011262;AGCD01011263;GBDJ01003857;XM_005377461;XM_013510675 XP_005377518;XP_013366129 MODEL 8910465 protein-coding LOC102010912 claudin-34-like NW_004955493 6423748 6424605 - 102010912 AGCD01061103;GBDF01011330;GBDK01381044;XM_005405150 XP_005405207 MODEL 8807606 protein-coding Gfy golgi associated olfactory signaling regulator INVOLVED IN non-motile cilium assembly (ortholog); protein localization to non-motile cilium (ortholog); sensory perception of smell (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955559 1409264 1414932 - 102018036 AGCD01073644;GBBH01114722;XM_005412887 XP_005412944 MODEL 8731185 protein-coding Sftpb surfactant protein B INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955424 1849313 1858087 + 102025136 AGCD01024248;GBDK01014342;XM_005385414;XM_005385415;XM_005385416;XM_005385417 XP_005385471;XP_005385472;XP_005385473;XP_005385474 MODEL 39132019 snrna U2 U2 spliceosomal RNA 9000805 protein-coding Cbln1 cerebellin 1 precursor ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor regulator activity (ortholog); INVOLVED IN cerebellar granule cell differentiation (ortholog); heterophilic cell-cell adhesion (ortholog); maintenance of synapse structure (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); parallel fiber to Purkinje cell synapse (ortholog) NW_004955433 7516487 7519929 - 102008449 AGCD01031571;GBDF01188759;GBDK01241650;XM_005388499 XP_005388556 MODEL 9049913 ncrna LOC102017423 uncharacterized LOC102017423 NW_004955454 859898 876194 - 102017423 AGCD01044961;GBDF01264436;XR_262763 MODEL 8890232 protein-coding Timp4 TIMP metallopeptidase inhibitor 4 INVOLVED IN Notch signaling pathway (ortholog); ovulation cycle (ortholog); response to cytokine (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Arteriovenous Fistula (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular space (ortholog); sarcomere (ortholog) NW_004955429 14689016 14693211 - 102017362 AGCD01028784;GBDI01354181;XM_005387015 XP_005387072 MODEL 8882929 protein-coding Bbx BBX high mobility group box domain containing ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN bone development (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955427 8221339 8476405 + 102010713 AGCD01027068;AGCD01027069;AGCD01027070;AGCD01027071;AGCD01027072;AGCD01027073;AGCD01027074;GBBH01150536;XM_005386346;XM_005386349;XM_005386351;XM_005386352;XM_013515184;XM_013515185;XM_013515186;XM_013515187 XP_005386403;XP_005386406;XP_005386408;XP_005386409;XP_013370638;XP_013370639;XP_013370640;XP_013370641 MODEL 8950801 protein-coding Adcy1 adenylate cyclase 1 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN axonogenesis (ortholog); cAMP biosynthetic process (ortholog); circadian rhythm (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 44 (ortholog); genetic disease (ortholog); Hyperkinesis (ortholog); FOUND IN axon hillock (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955456 6833992 6930990 - 102013052 AGCD01046378;AGCD01046379;AGCD01046380;AGCD01046381;GBCB01061631;GBCB01061632;XM_005396644 XP_005396701 MODEL 8856983 ncrna LOC102015137 uncharacterized LOC102015137 NW_004955432 4514878 4541603 - 102015137 AGCD01030725;GBDF01044924;XR_261511 MODEL 8700292 protein-coding Bmpr2 bone morphogenetic protein receptor type 2 ENCODES a protein that exhibits activin receptor activity, type II (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); aortic valve development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); Breast Neoplasms (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955457 12235780 12315680 - 102004042 AGCD01047005;AGCD01047006;GBCB01060551;GBDF01280157;XM_013520738 XP_013376192 MODEL 39131605 rrna 5S_rRNA 5S ribosomal RNA 39133822 misc_rna 7SK 7SK RNA 8996352 pseudo LOC102005336 60S ribosomal protein L12-like NW_004955406 7460294 7460841 + 102005336 AGCD01005771 MODEL 8818553 pseudo LOC102007145 zinc finger protein OZF-like NW_004955431 11381806 11382456 + 102007145 AGCD01030233 MODEL 9034454 protein-coding Alx4 ALX homeobox 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); HMG box domain binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); digestive tract development (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH Adenomatous Polyps (ortholog); bronchiolo-alveolar adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955422 3278615 3290799 + 102008120 AGCD01022507;GBCE01174422;XM_005384945 XP_005385002 MODEL 8911633 protein-coding Kiz kizuna centrosomal protein ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN spindle organization (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); retinitis pigmentosa 69 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955415 28991766 29078796 + 102022811 AGCD01016647;GBDF01002805;XM_005380949;XM_005380950;XM_013512366 XP_005381006;XP_005381007;XP_013367820 MODEL 9020661 protein-coding Farp2 FERM, ARH/RhoGEF and pleckstrin domain protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell adhesion (ortholog); hair cycle process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chromosome 2q37 deletion syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955542 279489 395524 - 102007815 AGCD01071466;AGCD01071467;AGCD01071468;AGCD01071469;AGCD01071470;AGCD01071471;GBDJ01141645;XM_005411126;XM_013508096;XM_013508097;XM_013508098;XM_013508099;XM_013508100;XR_001232165 XP_005411183;XP_013363550;XP_013363551;XP_013363552;XP_013363553;XP_013363554 MODEL 8756951 protein-coding LOC102020039 vomeronasal type-1 receptor 90-like NW_004955429 12592332 12593376 + 102020039 AGCD01028725;XM_005387254 XP_005387311 MODEL 8957251 protein-coding LOC102010114 vomeronasal type-1 receptor 4-like NW_004955603 478161 479087 + 102010114 AGCD01076848;XM_005414845 XP_005414902 MODEL 9042343 pseudo LOC102003606 probable ATP-dependent RNA helicase DDX6 pseudogene NW_004955607 367321 368195 + 102003606 AGCD01076984 MODEL 8850790 protein-coding LOC102012566 fatty acid desaturase 2-like protein FADS2P1 NW_004955511 1986298 2020040 + 102012566 AGCD01066386;AGCD01066387;GBCE01044968;XM_005407981 XP_005408038 MODEL 9063569 protein-coding Flrt3 fibronectin leucine rich transmembrane protein 3 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cell-cell adhesion (ortholog); embryonic morphogenesis (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism 21 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); Spontaneous Abortions (ortholog); FOUND IN axon terminus (ortholog); axonal growth cone (ortholog); cell-cell junction (ortholog) NW_004955415 23669749 23683235 - 102004804 AGCD01016560;GBDK01192877;XM_005380892;XM_013512282 XP_005380949;XP_013367736 MODEL 8817611 protein-coding Ecm2 extracellular matrix protein 2 ENCODES a protein that exhibits collagen binding (ortholog); collagen V binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) NW_004955515 5273277 5308709 + 102027561 AGCD01067347;AGCD01067348;GBDI01262746;XM_005408907;XM_005408909;XM_013506868;XM_013506869;XM_013506870;XM_013506871 XP_005408964;XP_005408966;XP_013362322;XP_013362323;XP_013362324;XP_013362325 MODEL 8947327 protein-coding Hey2 hes related family bHLH transcription factor with YRPW motif 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); aortic valve morphogenesis (ortholog); arterial endothelial cell differentiation (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH aortic valve disease (ortholog); Breast Neoplasms (ortholog); Brugada syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription repressor complex (ortholog) NW_004955436 7060930 7070610 + 102028012 AGCD01033698;AGCD01033699;GBBH01207418;GBCE01045612;XM_013516704 XP_013372158 MODEL 39134092 misc_rna 7SK 7SK RNA 8943486 protein-coding Dnal1 dynein axonemal light chain 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); dynein heavy chain binding (ortholog); INVOLVED IN outer dynein arm assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog) NW_004955523 1682955 1719468 - 102025040 AGCD01068537;AGCD01068538;GBCE01123019;XM_005409414;XM_005409415 XP_005409471;XP_005409472 MODEL 39133496 snrna U4 U4 spliceosomal RNA 8923499 protein-coding Ptpn13 protein tyrosine phosphatase non-receptor type 13 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cellular response to toxic substance (ortholog); negative regulation of excitatory synapse assembly (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH breast cancer (ortholog); colon cancer (ortholog); colorectal cancer (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) NW_004955474 2988109 3140520 - 102019164 AGCD01054318;AGCD01054319;AGCD01054320;AGCD01054321;AGCD01054322;GBDI01182369;XM_005401347;XM_005401348;XM_005401349;XM_005401354;XM_013502736;XM_013502737;XM_013502738;XM_013502739;XM_013502740;XM_013502741;XM_013502742;XM_013502743;XM_013502744 XP_005401404;XP_005401405;XP_005401406;XP_005401411;XP_013358190;XP_013358191;XP_013358192;XP_013358193;XP_013358194;XP_013358195;XP_013358196;XP_013358197;XP_013358198 MODEL 9037897 pseudo LOC102024225 zinc finger protein 181-like NW_004955478 7295033 7296935 + 102024225 AGCD01055956 MODEL 8827310 protein-coding Tsku tsukushi, small leucine rich proteoglycan ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); camera-type eye development (ortholog); cholesterol efflux (ortholog); FOUND IN extracellular space (ortholog) NW_004955414 15166349 15178284 - 102013919 AGCD01015181;GBBH01001334;XM_005379848;XM_005379849 XP_005379905;XP_005379906 MODEL 8764891 protein-coding Cbln2 cerebellin 2 precursor ENCODES a protein that exhibits signaling receptor regulator activity (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); positive regulation of synapse assembly (ortholog); spontaneous synaptic transmission (ortholog); ASSOCIATED WITH pulmonary hypertension (ortholog); FOUND IN extracellular space (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955402 56052340 56062190 - 102006847 AGCD01001454;GBDJ01241531;XM_005373058;XM_005373059;XM_005373060;XM_005373061;XM_005373062;XM_013511355 XP_005373115;XP_005373116;XP_005373117;XP_005373118;XP_005373119;XP_013366809 MODEL 9040287 protein-coding Tubb4a tubulin beta 4A class IVa ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 9 (ortholog); BROWN SYNDROME (ortholog); cerebral palsy (ortholog); FOUND IN axoneme (ortholog); ciliary tip (ortholog); cilium (ortholog) NW_004955495 3134181 3138725 + 102011456 AGCD01061828;GBCQ01009443;XM_005405712 XP_005405769 MODEL 9058353 protein-coding Pdzd8 PDZ domain containing 8 INVOLVED IN mitochondrial calcium ion homeostasis (ortholog); mitochondrion-endoplasmic reticulum membrane tethering (ortholog); ASSOCIATED WITH Intellectual Developmental Disorder with Autism and Dysmorphic Facies (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) NW_004955431 21980447 22060826 - 102029216 AGCD01030507;AGCD01030508;AGCD01030509;GBCQ01000406;XM_005387873;XM_005387874 XP_005387930;XP_005387931 MODEL 8731632 protein-coding LOC102018178 olfactory receptor 10T2-like NW_004955414 23717094 23718032 + 102018178 AGCD01015518;XM_005380522 XP_005380579 MODEL 8919893 protein-coding Traip TRAF interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of interferon-beta production (ortholog); negative regulation of tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH Dwarfism (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955532 1725608 1746690 - 102020483 AGCD01070200;GBDF01236147;XM_005410226 XP_005410283 MODEL 8917654 ncrna LOC102021541 uncharacterized LOC102021541 NW_004955412 24094867 24096661 + 102021541 AGCD01013110;GBDF01192647;XR_260020 MODEL 8957493 protein-coding Wdr90 WD repeat domain 90 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955442 16534951 16552856 - 102020724 AGCD01037901;GBDF01080193;XM_005391622;XM_013517761;XM_013517762;XR_001235382 XP_005391679;XP_013373215;XP_013373216 MODEL 8947304 protein-coding Alyref Aly/REF export factor ENCODES a protein that exhibits C5-methylcytidine-containing RNA reader activity (ortholog); molecular adaptor activity (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA metabolic process (ortholog); RNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955506 1278230 1282064 + 102025269 AGCD01065254;AGCD01065255;GBDF01049120;XM_013506125 XP_013361579 MODEL 8979103 ncrna LOC102006092 uncharacterized LOC102006092 NW_004955405 12203636 12228952 - 102006092 AGCD01004849;GBDK01148852;XR_001235355;XR_001235356;XR_001235357;XR_001235358 MODEL 9066929 protein-coding Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); tRNA binding (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); tRNA processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 14 (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955465 7878115 8345749 - 102008076 AGCD01050469;AGCD01050470;AGCD01050471;AGCD01050472;AGCD01050473;GBBH01102302;XM_005398876;XM_005398877;XM_005398878;XM_013521840;XM_013521841;XM_013521842 XP_005398933;XP_005398934;XP_005398935;XP_013377294;XP_013377295;XP_013377296 MODEL 8964265 protein-coding LOC102019755 arylacetamide deacetylase NW_004955448 2918412 3246858 + 102019755 AGCD01041293;AGCD01041294;AGCD01041295;AGCD01041296;AGCD01041297;AGCD01041298;AGCD01041299;AGCD01041300;AGCD01041301;AGCD01041302;AGCD01041303;AGCD01041304;AGCD01041305;AGCD01041306;AGCD01041307;AGCD01041308;AGCD01041309;AGCD01041310;AGCD01041311;AGCD01041312;AGCD01041313;AGCD01041314;AGCD01041315;AGCD01041316;AGCD01041317;AGCD01041318;AGCD01041319;GBDF01135740;XM_013518616 XP_013374070 MODEL 10177660 protein-coding LOC106147150 RING finger protein 113A-like NW_004955523 1388264 1390123 - 106147150 AGCD01068514;GBBH01101574;XM_013507140 XP_013362594 MODEL 8849926 protein-coding Agt angiotensinogen ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); aldosterone secretion (ortholog); angiotensin-activated signaling pathway (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; angiotensin II signaling pathway; angiotensin II signaling pathway via AT1 receptor; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Albuminuria (ortholog); alcoholic cardiomyopathy (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); mitochondrion (ortholog) NW_004955492 7863662 7874863 + 102012441 AGCD01060805;GBCQ01167112;XM_005404990 XP_005405047 MODEL 39134406 misc_rna 7SK 7SK RNA 8888838 protein-coding Ecpas Ecm29 proteasome adaptor and scaffold ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN ERAD pathway (ortholog); FOUND IN centrosome (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytoplasmic vesicle (ortholog) NW_004955419 15775208 15886101 + 102010806 AGCD01020089;AGCD01020090;AGCD01020091;AGCD01020092;GBBH01185618;GBDF01208691;XM_013513203 XP_013368657 MODEL 8794379 protein-coding Heyl hes related family bHLH transcription factor with YRPW motif like ENCODES a protein that exhibits AF-1 domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN atrioventricular valve morphogenesis (ortholog); cardiac epithelial to mesenchymal transition (ortholog); cardiac ventricle morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Carotid Artery Injuries (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 17137066 17152714 - 102024524 AGCD01044545;GBCB01005825;XM_005395248;XM_005395249;XM_005395250;XM_005395251;XM_005395252;XM_005395253;XM_013519726;XM_013519727 XP_005395305;XP_005395306;XP_005395307;XP_005395308;XP_005395309;XP_005395310;XP_013375180;XP_013375181 MODEL 9068206 pseudo LOC102022544 caspase-3 pseudogene NW_004955543 215177 216358 - 102022544 AGCD01071566 MODEL 9036604 trna Trnai-aau transfer RNA isoleucine (anticodon AAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978794 AGCD01050493;AGCD01050590;AGCD01050591;AGCD01050597;AGCD01051466;AGCD01051471;AGCD01057606;AGCD01077147 MODEL 39131407 protein-coding CHML CHM like Rab escort protein 39132401 snrna U6 U6 spliceosomal RNA 39134407 misc_rna 7SK 7SK RNA 8856184 protein-coding Kl klotho ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); determination of adult lifespan (ortholog); energy reserve metabolic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amenorrhea (ortholog); Animal Disease Models (ortholog) NW_004955431 12782913 12833215 - 102015879 AGCD01030271;AGCD01030272;GBCQ01000622;XM_013515718 XP_013371172 MODEL 8759747 pseudo LOC102010913 cationic trypsin-3-like NW_004955494 1211669 1216586 + 102010913 AGCD01061392 MODEL 8979850 protein-coding Arcn1 archain 1 coat protein complex I subunit delta INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer maturation (ortholog); Golgi vesicle transport (ortholog); ASSOCIATED WITH Ataxia (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955412 19718534 19750340 + 102012840 AGCD01012972;AGCD01012973;AGCD01012974;AGCD01012975;AGCD01012976;AGCD01012977;GBDF01049215;XM_005378251 XP_005378308 MODEL 8713781 protein-coding Irx3 iroquois homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN atrioventricular bundle cell differentiation (ortholog); energy homeostasis (ortholog); His-Purkinje system cell differentiation (ortholog); ASSOCIATED WITH lung disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955433 11944890 11948372 - 102003053 AGCD01031656;GBCQ01004638;XM_005388313;XM_013516268 XP_005388370;XP_013371722 MODEL 39131957 snrna U2 U2 spliceosomal RNA 8979113 protein-coding Gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); Golgi to plasma membrane transport (ortholog); intracellular protein localization (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); protein-containing complex (ortholog) NW_004955413 24018595 24037887 + 102006445 AGCD01014344;AGCD01014345;GBBH01087702;XM_005379210;XM_005379213 XP_005379267;XP_005379270 MODEL 9004019 pseudo LOC102017431 protein BTG3-like NW_004955410 10869770 10874320 - 102017431 AGCD01010799 MODEL 39134093 misc_rna 7SK 7SK RNA 8841742 protein-coding Rgs14 regulator of G protein signaling 14 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); GTPase activating protein binding (ortholog); INVOLVED IN cell division (ortholog); chromosome segregation (ortholog); learning (ortholog); ASSOCIATED WITH nephrolithiasis (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955408 29602654 29616793 + 102024093 AGCD01008765;GBDI01222250;XM_005376427 XP_005376484 MODEL 8807323 protein-coding Flt1 fms related receptor tyrosine kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel morphogenesis (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN axitinib pharmacodynamics pathway; bevacizumab pharmacodynamics pathway; glypican signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic contact dermatitis (ortholog); angiosarcoma (ortholog); FOUND IN extracellular space (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955497 7653309 7831737 - 102006932 AGCD01062681;AGCD01062682;GBDK01093188;XM_005406358;XM_005406359;XM_005406360 XP_005406415;XP_005406416;XP_005406417 MODEL 8718368 protein-coding Tinag tubulointerstitial nephritis antigen INVOLVED IN cell adhesion (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); FOUND IN basement membrane (ortholog) NW_004955411 1718969 1809370 - 102006107 AGCD01011487;AGCD01011488;AGCD01011489;AGCD01011490;GBCQ01040782;XM_005377590;XM_013510703 XP_005377647;XP_013366157 MODEL 9032080 protein-coding Bcam basal cell adhesion molecule (Lutheran blood group) ENCODES a protein that exhibits laminin binding (ortholog); laminin receptor activity (ortholog); INVOLVED IN cell adhesion (ortholog); cell-matrix adhesion (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955555 1943445 1950810 + 102027119 AGCD01073118;GBBH01004296;GBDI01013618;XM_013508693 XP_013364147 MODEL 9041084 protein-coding Atxn10 ataxin 10 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); nervous system development (ortholog); neuron projection development (ortholog); ASSOCIATED WITH genetic disease (ortholog); spinocerebellar ataxia 10 (ortholog); Spinocerebellar Ataxias (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955413 29956904 30104868 + 102014038 AGCD01014598;AGCD01014599;AGCD01014600;AGCD01014601;GBCQ01014279;GBDJ01075642;XM_013511506 XP_013366960 MODEL 8770267 ncrna LOC102006093 uncharacterized LOC102006093 NW_004955452 11238563 11263569 + 102006093 AGCD01044333;GBBH01084072;XR_001236059;XR_001236060;XR_001236061;XR_001236062;XR_262679 MODEL 39131606 rrna 5S_rRNA 5S ribosomal RNA 9059681 protein-coding Farsa phenylalanyl-tRNA synthetase subunit alpha ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); protein heterotetramerization (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH Rajab Interstitial Lung Disease with Brain Calcifications 2 (ortholog); FOUND IN cytoplasm (ortholog); phenylalanine-tRNA ligase complex (ortholog) NW_004955415 31972888 31981424 - 102026103 AGCD01016704;GBCE01076932;XM_005381042 XP_005381099 MODEL 8910985 protein-coding Plin1 perilipin 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cellular response to cold (ortholog); lipid catabolic process (ortholog); negative regulation of lipid catabolic process (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 4 (ortholog); FOUND IN cell periphery (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955416 15538309 15549275 + 102026001 AGCD01017335;GBDI01016533;XM_013512551;XM_013512552 XP_013368005;XP_013368006 MODEL 8936844 ncrna LOC102005337 uncharacterized LOC102005337 NW_004955406 13632067 13716155 - 102005337 AGCD01005948;AGCD01005949;GBDF01163324;XR_001236425;XR_001236426;XR_001236427 MODEL 8912965 protein-coding Tslp thymic stromal lymphopoietin ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-7 receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Albuminuria (ortholog); allergic contact dermatitis (ortholog); allergic disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955418 4041529 4045534 - 102025006 AGCD01018807;XM_005382342 XP_005382399 MODEL 8726896 protein-coding LOC102020043 MICAL-like protein 1 NW_004955517 2041415 2043518 - 102020043 AGCD01067614;GBBH01168608;XM_005409030 XP_005409087 MODEL 8832805 protein-coding Bms1 BMS1 ribosome biogenesis factor INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH ectodermal dysplasia (ortholog); nonsyndromic aplasia cutis congenita (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955546 1054208 1089048 + 102004325 AGCD01072039;AGCD01072040;GBDF01089574;XM_005411758;XM_005411759;XM_005411761 XP_005411815;XP_005411816;XP_005411818 MODEL 8862508 ncrna LOC102018180 uncharacterized LOC102018180 NW_004955416 11264103 11270327 - 102018180 AGCD01017181;GBDF01051838;XR_001233298 MODEL 8912778 pseudo LOC102010116 oxysterol-binding protein-related protein 8-like NW_004955648 80516 86972 - 102010116 AGCD01077770 MODEL 10163433 ncrna LOC106150122 uncharacterized LOC106150122 NW_004955465 2995380 3037445 + 106150122 AGCD01050366;AGCD01050367;XR_001236741;XR_001236742 MODEL 8787685 protein-coding Hoxa11 homeobox A11 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); ASSOCIATED WITH Congenital Limb Deformities (ortholog); Contracture (ortholog); Endometrial Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) NW_004955410 28875780 28879643 - 102007413 AGCD01011263;AGCD01011264;GBDJ01179922;XM_013510674 XP_013366128 MODEL 8836799 protein-coding Pdzd9 PDZ domain containing 9 NW_004955493 690694 705953 - 102008545 AGCD01060859;GBDF01005698;XM_005405055;XM_005405056 XP_005405112;XP_005405113 MODEL 8793157 protein-coding Tubb4b tubulin beta 4B class IVb ENCODES a protein that exhibits double-stranded RNA binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Leber congenital amaurosis with early-onset deafness (ortholog); FOUND IN axonemal microtubule (ortholog); microtubule (ortholog); sperm flagellum (ortholog) NW_004955513 5237050 5239370 + 102011897 AGCD01066963;GBBH01001119;XM_005408609 XP_005408666 MODEL 8702184 protein-coding Sftpc surfactant protein C ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955403 45649149 45651421 + 102004547 AGCD01002825;GBDK01013470;XM_005373651;XM_005373652 XP_005373708;XP_005373709 MODEL 8709724 protein-coding Gpr12 G protein-coupled receptor 12 ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH obesity (ortholog) NW_004955497 6248096 6251106 - 102029530 AGCD01062628;GBDK01402621;XM_005406351 XP_005406408 MODEL 8699973 protein-coding Adcy10 adenylate cyclase 10 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); ATPase binding (ortholog); bicarbonate binding (ortholog); INVOLVED IN cAMP biosynthetic process (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); glucose catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Hypercalciuria, Absorptive, 2 (ortholog); Optic Nerve Injuries (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); astrocyte end-foot (ortholog) NW_004955462 9196984 9278850 + 102022369 AGCD01049333;AGCD01049334;AGCD01049335;GBDF01086065;XM_013521435;XM_013521436 XP_013376889;XP_013376890 MODEL 8815794 protein-coding Wdr91 WD repeat domain 91 ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); regulation of protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) NW_004955494 7441880 7470174 + 102013426 AGCD01061552;GBDF01015655;XM_005405487;XM_005405488 XP_005405544;XP_005405545 MODEL 10359248 pseudo LOC106147151 ribosome production factor 2 homolog pseudogene NW_004955523 1515879 1517585 - 106147151 AGCD01068523 MODEL 8816061 pseudo LOC102024226 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955479 9843625 9844159 + 102024226 AGCD01056499 MODEL 9027417 protein-coding Atf1 activating transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); positive regulation of DNA replication (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH polycystic kidney disease (ortholog); polycystic ovary syndrome (ortholog); FOUND IN ATF1-ATF4 transcription factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955547 1263288 1299525 + 102017709 AGCD01072207;AGCD01072208;GBDF01044548;GBDF01044556;XM_013508455;XM_013508456 XP_013363909;XP_013363910 MODEL 39133823 misc_rna 7SK 7SK RNA 8833789 protein-coding Ptpn14 protein tyrosine phosphatase non-receptor type 14 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN lymphangiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of protein export from nucleus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Choanal Atresia and Lymphedema (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 3368833 3463170 + 102012155 AGCD01005671;AGCD01005672;GBCE01077552;XM_005374719;XM_013519964 XP_005374776;XP_013375418 MODEL 8865526 protein-coding LOC102007148 putative spermatogenesis-associated protein 31D4 NW_004955434 10580926 10593113 + 102007148 AGCD01032355;GBDF01001033;XM_005388673 XP_005388730 MODEL 8923142 protein-coding Cbln3 cerebellin 3 precursor FOUND IN extracellular space (ortholog); parallel fiber to Purkinje cell synapse (ortholog); synapse (ortholog) NW_004955409 35880337 35882485 + 102025092 AGCD01010435;GBDK01038610;XM_005376997 XP_005377054 MODEL 8968014 protein-coding Ecrg4 ECRG4 augurin precursor ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cellular senescence (ortholog); G1 to G0 transition (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); dense core granule (ortholog) NW_004955470 10646585 10655311 + 102003533 AGCD01052873;GBDF01251056;XM_005400791;XM_013522789 XP_005400848;XP_013378243 MODEL 8750554 pseudo LOC102012567 transcription initiation factor TFIID subunit 2 pseudogene NW_004955511 981095 984836 - 102012567 AGCD01066350 MODEL 39132403 snrna U6 U6 spliceosomal RNA 9026248 protein-coding LOC102021543 sulfotransferase 6B1-like NW_004955413 17616399 17636221 - 102021543 AGCD01014159;AGCD01014160;GBDK01289164;XM_005379072 XP_005379129 MODEL 39133497 snrna U4 U4 spliceosomal RNA 8720757 protein-coding Amacr alpha-methylacyl-CoA racemase ENCODES a protein that exhibits alpha-methylacyl-CoA racemase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH adenoma (ortholog); alpha-methylacyl-CoA racemase deficiency (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); peroxisome (ortholog) NW_004955426 19570179 19580920 - 102028990 AGCD01026549;GBCB01061062;XM_005386170;XM_005386171 XP_005386227;XP_005386228 MODEL 8933396 protein-coding Hoxa13 homeobox A13 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); animal organ morphogenesis (ortholog); artery morphogenesis (ortholog); ASSOCIATED WITH Anorectal Malformations (ortholog); Congenital Hand Deformities (ortholog); Female Urogenital Diseases (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 28887952 28893515 - 102026840 AGCD01011265;GBDF01224342;XM_013510484;XR_001232705 XP_013365938 MODEL 8820454 protein-coding Gga2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); protein localization to cell surface (ortholog); FOUND IN clathrin-coated vesicle (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955493 2041791 2068720 - 102014062 AGCD01060922;AGCD01060923;GBCB01022843;GBCE01054393;XM_013504804 XP_013360258 MODEL 9007412 protein-coding Sftpd surfactant protein D ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN lung alveolus development (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of phagocytosis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; surfactant homeostasis pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); multivesicular body (ortholog) NW_004955510 213468 226096 + 102025710 AGCD01066142;GBDK01010352;XM_005407866;XM_005407867;XM_013506331 XP_005407923;XP_005407924;XP_013361785 MODEL 8908836 protein-coding Flt3 fms related receptor tyrosine kinase 3 ENCODES a protein that exhibits cytokine receptor activity (ortholog); nuclear glucocorticoid receptor binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955497 7357533 7441215 - 102006150 AGCD01062671;AGCD01062672;AGCD01062673;AGCD01062674;GBBH01210557;GBDI01027559;XM_013505445 XP_013360899 MODEL 9054797 protein-coding LOC102003607 PRAME family member 12-like NW_004955615 28450 30897 - 102003607 AGCD01077247;XM_005414978 XP_005415035 MODEL 8832226 protein-coding Tinagl1 tubulointerstitial nephritis antigen like 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); laminin binding (ortholog); INVOLVED IN proteolysis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955452 9995658 10007418 + 102010121 AGCD01044267;GBCE01096097;XM_005395027;XM_005395028 XP_005395084;XP_005395085 MODEL 8761451 protein-coding Atxn1l ataxin 1 like ENCODES a protein that exhibits POZ domain binding (ortholog); INVOLVED IN brain development (ortholog); extracellular matrix organization (ortholog); learning (ortholog); ASSOCIATED WITH Spinocerebellar Ataxias (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955484 4546012 4557184 + 102014568 AGCD01058220;GBDF01010365;XM_005403518;XM_005403519 XP_005403575;XP_005403576 MODEL 10392019 protein-coding Chml CHM like Rab escort protein ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN protein geranylgeranylation (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); Rab-protein geranylgeranyltransferase complex (ortholog) NW_004955406 10455367 10461934 + 106146235 AGCD01005861;GBDF01223071;XM_013520518 XP_013375972 MODEL 8784960 protein-coding LOC102006094 intestinal-type alkaline phosphatase-like NW_004955453 3530091 3533832 + 102006094 AGCD01044662;AGCD01044663;XM_005395706 XP_005395763 MODEL 8968984 protein-coding LOC102020048 IQ domain-containing protein F5-like NW_004955532 3450275 3480124 + 102020048 AGCD01070280;AGCD01070281;AGCD01070282;AGCD01070283;GBDF01010015;GBDK01280477;XM_013507566 XP_013363020 MODEL 8782605 protein-coding Trak1 trafficking kinesin protein 1 ENCODES a protein that exhibits GABA receptor binding (ortholog); TPR domain binding (ortholog); INVOLVED IN axonal transport of mitochondrion (ortholog); dendrite morphogenesis (ortholog); endosome to lysosome transport (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 68 (ortholog); genetic disease (ortholog); schizophrenia (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955420 28457179 28547585 - 102003973 AGCD01021478;AGCD01021479;AGCD01021480;GBBH01163772;XM_005383550;XM_005383551;XM_005383552;XM_005383553;XM_005383562;XM_013513471;XM_013513472 XP_005383607;XP_005383608;XP_005383609;XP_005383610;XP_005383619;XP_013368925;XP_013368926 MODEL 9037542 protein-coding LOC102010123 uncharacterized LOC102010123 NW_004955406 1259242 1295310 - 102010123 AGCD01005629;AGCD01005630;GBCQ01057585;XM_013503029 XP_013358483 MODEL 8850916 ncrna LOC102018185 uncharacterized LOC102018185 NW_004955481 6299681 6301761 - 102018185 AGCD01057023;GBCE01032788;XR_263784 MODEL 39133585 snrna U2 U2 spliceosomal RNA 8802475 protein-coding Dnal4 dynein axonemal light chain 4 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH mirror movements 3 (ortholog) NW_004955413 24897329 24908484 - 102025228 AGCD01014387;GBDJ01278017;XM_005379277;XM_005379280 XP_005379334;XP_005379337 MODEL 39134094 misc_rna 7SK 7SK RNA 8909102 pseudo LOC102019756 coilin pseudogene NW_004955402 35710345 35712921 + 102019756 AGCD01000896;XM_005372931 MODEL 39132179 rrna 5S_rRNA 5S ribosomal RNA 8746204 protein-coding Irx4 iroquois homeobox 4 INVOLVED IN establishment of animal organ orientation (ortholog); heart development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Cardiomegaly (ortholog); Salivary Gland Neoplasms (ortholog) NW_004955504 937152 940842 - 102009402 AGCD01064832;AGCD01064833;GBDF01086639;XM_013505866 XP_013361320 MODEL 9014617 protein-coding Pdzk1 PDZ domain containing 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); scavenger receptor binding (ortholog); INVOLVED IN carnitine transmembrane transport (ortholog); in utero embryonic development (ortholog); positive regulation of protein localization to membrane (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Neoplasms (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955568 405697 436346 + 102008785 AGCD01074514;GBCQ01008166;XM_005413444;XM_005413447 XP_005413501;XP_005413504 MODEL 8948170 protein-coding LOC102015143 chromosome unknown open reading frame, human C1orf50 ENCODES a protein that exhibits identical protein binding (ortholog) NW_004955537 2292430 2301938 + 102015143 AGCD01070921;GBDF01080344;XM_005410617 XP_005410674 MODEL 39132404 snrna U6 U6 spliceosomal RNA 8759254 protein-coding Adcy2 adenylate cyclase 2 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); adenylate cyclase binding (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN adenosine signaling pathway; dopamine signaling pathway via D1 family of receptors; endothelin signaling pathway; ASSOCIATED WITH asthma (ortholog); bipolar disorder (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955504 4990634 5376990 + 102017587 AGCD01064892;AGCD01064893;AGCD01064894;AGCD01064895;AGCD01064896;AGCD01064897;GBCB01003732;XM_005407072 XP_005407129 MODEL 8707092 trna Trnai-gau transfer RNA isoleucine (anticodon GAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955500 8293826 8293897 + 101978795 AGCD01063986 MODEL 8867653 protein-coding LOC102022545 speckle-type POZ protein A-like NW_004955546 32587 33360 - 102022545 AGCD01071944;XM_005411814 XP_005411871 MODEL 9016007 protein-coding Sfxn1 sideroflexin 1 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-serine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); iron ion transport (ortholog); L-alanine transport (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Colorectal Neoplasms (ortholog); lung adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955408 28054211 28105294 + 102006545 AGCD01008703;AGCD01008704;AGCD01008705;AGCD01008706;AGCD01008707;GBDK01358301;XM_005376362;XM_013509460 XP_005376419;XP_013364914 MODEL 39134408 misc_rna 7SK 7SK RNA 8965656 protein-coding LOC102024232 small ubiquitin-related modifier 2-like NW_004955419 19430532 19431458 + 102024232 AGCD01020211;XM_013513265 XP_013368719 MODEL 8735694 ncrna LOC102007156 uncharacterized LOC102007156 NW_004955440 17575869 17579753 - 102007156 AGCD01036575;GBDF01304834;XR_262035 MODEL 9041374 protein-coding Farsb phenylalanyl-tRNA synthetase subunit beta ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); protein heterotetramerization (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH Aneurysm (ortholog); genetic disease (ortholog); INTERSTITIAL LUNG AND LIVER DISEASE (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); phenylalanine-tRNA ligase complex (ortholog) NW_004955453 11176481 11237243 + 102023772 AGCD01044804;AGCD01044805;AGCD01044806;GBDF01053840;XM_005395494 XP_005395551 MODEL 9009288 protein-coding Atf2 activating transcription factor 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); cAMP response element binding protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN abducens nucleus development (ortholog); adipose tissue development (ortholog); amelogenesis (ortholog); PARTICIPATES IN adenosine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); basal cell carcinoma (ortholog); disease of cellular proliferation (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955449 332563 411218 + 102029572 AGCD01041762;AGCD01041763;AGCD01041764;AGCD01041765;GBDF01052391;XM_005393172 XP_005393229 MODEL 8955739 ncrna LOC102010918 uncharacterized LOC102010918 NW_004955496 4040916 4059796 - 102010918 AGCD01062307;AGCD01062308;GBDF01279073;XR_264175 MODEL 9044936 protein-coding Bmt2 base methyltransferase of 25S rRNA 2 homolog ENCODES a protein that exhibits protein-containing complex binding (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to methionine (ortholog); positive regulation of TORC1 signaling (ortholog) NW_004955432 19046121 19107178 - 102003997 AGCD01031165;AGCD01031166;AGCD01031167;GBDF01192648;GBDJ01278833;XM_013516035 XP_013371489 MODEL 8726727 protein-coding Ptpn18 protein tyrosine phosphatase non-receptor type 18 ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955459 65191 90459 + 102012407 AGCD01047924;GBDK01194260;XM_005397542;XM_005397543;XM_005397544 XP_005397599;XP_005397600;XP_005397601 MODEL 8861391 protein-coding Areg amphiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); epithelial cell proliferation involved in mammary gland duct elongation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955474 680212 689021 + 102006903 AGCD01054227;GBDK01177128;XM_005401313 XP_005401370 MODEL 8821411 pseudo LOC102017433 ubiquitin-conjugating enzyme E2 L3 pseudogene NW_004955464 6709208 6710115 - 102017433 AGCD01050038 MODEL 8789045 protein-coding Gpr132 G protein-coupled receptor 132 INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH autoimmune disease (ortholog) NW_004955538 3366333 3382778 - 102003379 AGCD01071162;GBDK01219635;XM_005410854;XM_013507894;XM_013507895 XP_005410911;XP_013363348;XP_013363349 MODEL 8808669 protein-coding Agtpbp1 ATP/GTP binding carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); ASSOCIATED WITH Childhood-Onset Neurodegeneration with Cerebellar Atrophy (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955432 1628966 1816373 + 102027328 AGCD01030602;AGCD01030603;AGCD01030604;AGCD01030605;AGCD01030606;GBDF01035729;XM_005387927;XM_005387928;XM_005387929;XM_005387930;XM_013516036;XM_013516037;XR_261503 XP_005387984;XP_005387985;XP_005387986;XP_005387987;XP_013371490;XP_013371491 MODEL 8731107 protein-coding Hfe homeostatic iron regulator ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); co-receptor binding (ortholog); peptide antigen binding (ortholog); INVOLVED IN acute-phase response (ortholog); BMP signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); acute lymphoblastic leukemia (ortholog); alcohol-associated liver disease (ortholog); FOUND IN apical part of cell (ortholog); basal part of cell (ortholog); cytoplasmic vesicle (ortholog) NW_004955483 933269 941070 - 102021973 AGCD01057637;GBCQ01129220;XM_005403312 XP_005403369 MODEL 39131607 rrna 5S_rRNA 5S ribosomal RNA 8932614 protein-coding Hoxa2 homeobox A2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain segmentation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH Congenital Microtia (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN nucleus (ortholog) NW_004955410 28794878 28798231 - 102029598 AGCD01011259;GBDK01144344;XM_005377445 XP_005377502 MODEL 39132405 snrna U6 U6 spliceosomal RNA 8911469 protein-coding Plin2 perilipin 2 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Hypertriglyceridemia (ortholog); Insulin Resistance (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955434 21573860 21580990 - 102018432 AGCD01032639;GBCB01119738;GBDJ01082348;XM_013516386 XP_013371840 MODEL 9042592 protein-coding LOC102015149 aquaporin-12-like NW_004955542 836900 842620 - 102015149 AGCD01071481;XM_005411153 XP_005411210 MODEL 8938454 protein-coding Gpr135 G protein-coupled receptor 135 ENCODES a protein that exhibits arrestin family protein binding (ortholog); ASSOCIATED WITH lung non-small cell carcinoma (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) NW_004955466 13188710 13194054 - 102023130 AGCD01051151;AGCD01051152;GBDF01278355;XM_005399256 XP_005399313 MODEL 9000908 protein-coding Cbln4 cerebellin 4 precursor INVOLVED IN inhibitory synapse assembly (ortholog); protein secretion (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); GABA-ergic synapse (ortholog) NW_004955445 3209006 3216679 + 102012589 AGCD01039384;XM_005392279 XP_005392336 MODEL 8962038 pseudo LOC102012571 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955434 15042346 15042821 - 102012571 AGCD01032459 MODEL 9033867 protein-coding Tsn translin ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN siRNA processing (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955459 8285442 8299329 - 102012835 AGCD01048139;GBDJ01275284;XM_005397637 XP_005397694 MODEL 8906879 protein-coding Klb klotho beta ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH amenorrhea (ortholog); Martsolf syndrome 1 (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog) NW_004955443 7917047 7954390 - 102003702 AGCD01038301;AGCD01038302;AGCD01038303;AGCD01038304;GBDF01193281;GBDI01383332;XM_013518072 XP_013373526 MODEL 9047727 protein-coding Tiparp TCDD inducible poly(ADP-ribose) polymerase ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); face morphogenesis (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN nucleus (ortholog) NW_004955448 7687668 7716481 + 102019653 AGCD01041422;GBDF01125248;XM_005393080 XP_005393137 MODEL 10283083 protein-coding LOC106150123 basic proline-rich protein-like NW_004955465 12513964 12515837 + 106150123 AGCD01050550;XM_013521810 XP_013377264 MODEL 39133498 snrna U4 U4 spliceosomal RNA 9044027 protein-coding Rgs16 regulator of G protein signaling 16 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955406 21439536 21444822 - 102018361 AGCD01006128;GBDI01354177;XM_005375005 XP_005375062 MODEL 8991138 protein-coding Atf3 activating transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); endoplasmic reticulum unfolded protein response (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Experimental Arthritis (ortholog); FOUND IN CHOP-ATF3 complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955406 4875672 4889173 - 102020412 AGCD01005709;GBDJ01179405;XM_005374741 XP_005374798 MODEL 9011370 protein-coding LOC102021545 neuroblastoma breakpoint family member 4-like NW_004955468 10000866 10052333 + 102021545 AGCD01052065;AGCD01052066;GBDK01417179;XM_005400141;XM_013522485;XM_013522486 XP_005400198;XP_013377939;XP_013377940 MODEL 39133587 snrna U2 U2 spliceosomal RNA 10085183 ncrna LOC106147152 uncharacterized LOC106147152 NW_004955523 1550074 1561204 + 106147152 AGCD01068525;GBCE01156577;XR_001231921 MODEL 8836725 protein-coding Bcan brevican INVOLVED IN cell-matrix adhesion (ortholog); gliogenesis (ortholog); hippocampus development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cell surface (ortholog) NW_004955545 2723780 2739334 + 102006498 AGCD01071921;GBDJ01354414;XM_005411692 XP_005411749 MODEL 8849871 protein-coding Pdzk1ip1 PDZK1 interacting protein 1 INVOLVED IN D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) NW_004955464 11339800 11344492 + 102009921 AGCD01050144;GBDJ01091555;XM_005398640 XP_005398697 MODEL 39132180 rrna 5S_rRNA 5S ribosomal RNA 9017823 protein-coding Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 ENCODES a protein that exhibits protein transporter activity (ortholog); protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane protein transport (ortholog); negative regulation of amyloid-beta formation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); lysosome (ortholog) NW_004955553 2103694 2124748 - 102024167 AGCD01072923;GBDF01104296;XM_005412287;XM_013508629;XM_013508630 XP_005412344;XP_013364083;XP_013364084 MODEL 8803293 protein-coding Adcy3 adenylate cyclase 3 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN acrosome reaction (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH cardiomyopathy (ortholog); diabetes mellitus (ortholog); diabetic angiopathy (ortholog); FOUND IN acrosomal vesicle (ortholog); apical cytoplasm (ortholog); ciliary membrane (ortholog) NW_004955469 6933208 7026179 - 102029496 AGCD01052399;AGCD01052400;AGCD01052401;AGCD01052402;AGCD01052403;GBBH01198294;GBDK01116618;XM_013522659 XP_013378113 MODEL 9022679 protein-coding LOC102003608 RNA-binding protein 45 NW_004955403 18755127 18773060 - 102003608 AGCD01002110;AGCD01002111;AGCD01002112;GBCQ01097237;GBDJ01233290;XM_005373393;XM_005373395 XP_005373450;XP_005373452 MODEL 39132407 snrna U6 U6 spliceosomal RNA 8914831 protein-coding Sfxn2 sideroflexin 2 INVOLVED IN mitochondrial transmembrane transport (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955485 7716916 7732122 - 102012098 AGCD01058672;GBCE01065073;XM_005403827;XM_005403828;XM_013504027;XM_013504028;XM_013504029;XM_013504030;XM_013504031;XM_013504033;XM_013504034;XM_013504035;XM_013504036;XR_001231068 XP_005403884;XP_005403885;XP_013359481;XP_013359482;XP_013359483;XP_013359484;XP_013359485;XP_013359487;XP_013359488;XP_013359489;XP_013359490 MODEL 9066516 protein-coding Chmp1a charged multivesicular body protein 1A ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cell division (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); pontocerebellar hypoplasia (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); condensed nuclear chromosome (ortholog) NW_004955541 3216972 3223636 - 102013007 AGCD01071440;GBDI01072457;XM_005411048;XM_005411049 XP_005411105;XP_005411106 MODEL 9012150 protein-coding LOC102024233 glutathione S-transferase omega-2 NW_004955485 6370505 6390718 - 102024233 AGCD01058616;AGCD01058617;AGCD01058618;GBDF01002229;XM_005403780 XP_005403837 MODEL 8848985 ncrna LOC102010124 uncharacterized LOC102010124 NW_004955406 8915324 8930814 + 102010124 AGCD01005810;GBDF01157210;XR_259486 MODEL 8952368 protein-coding Trak2 trafficking kinesin protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); GABA receptor binding (ortholog); kinesin binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); dendritic transport of mitochondrion (ortholog); endosome to lysosome transport (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955403 205372 261210 + 102020182 AGCD01001683;AGCD01001684;AGCD01001685;GBDK01185209;XM_005373197;XM_005373199;XM_005373200;XM_005373201;XM_013511713;XM_013511715 XP_005373254;XP_005373256;XP_005373257;XP_005373258;XP_013367167;XP_013367169 MODEL 8728334 ncrna LOC102010919 uncharacterized LOC102010919 NW_004955424 15047979 15112987 + 102010919 AGCD01024683;AGCD01024684;AGCD01024685;AGCD01024686;AGCD01024687;AGCD01024688;AGCD01024689;GBBH01137283;XR_001234214;XR_001234215;XR_001234216;XR_001234217;XR_001234218;XR_001234219;XR_001234220;XR_001234221;XR_001234222;XR_001234223 MODEL 8847762 protein-coding Wdr93 WD repeat domain 93 ASSOCIATED WITH autism spectrum disorder (ortholog) NW_004955416 15472866 15527853 - 102026636 AGCD01017332;AGCD01017333;AGCD01017334;AGCD01017335;GBDF01045871;XM_005381546;XM_005381547;XM_013512549;XM_013512550 XP_005381603;XP_005381604;XP_013368003;XP_013368004 MODEL 8888264 protein-coding Fas Fas cell surface death receptor ENCODES a protein that exhibits calmodulin binding (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN apical dendrite (ortholog); apical plasma membrane (ortholog); CD95 death-inducing signaling complex (ortholog) NW_004955425 3961671 3987513 - 102018947 AGCD01025304;AGCD01025305;GBDK01273863;XM_005385857;XM_005385858 XP_005385914;XP_005385915 MODEL 8757417 protein-coding Dnali1 dynein axonemal light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); INVOLVED IN sperm flagellum assembly (ortholog); ASSOCIATED WITH spermatogenic failure 83 (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); ciliary base (ortholog) NW_004955452 15367443 15375001 + 102011729 AGCD01044486;GBDF01044844;XM_005395209 XP_005395266 MODEL 8912126 pseudo LOC102019757 calcyclin-binding protein pseudogene NW_004955593 833159 833718 - 102019757 AGCD01076401 MODEL 39133824 misc_rna 7SK 7SK RNA 8955768 protein-coding Bmx BMX non-receptor tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN signal transduction (ortholog); FOUND IN plasma membrane (ortholog); ruffle membrane (ortholog) NW_004955519 2638081 2689601 - 102015230 AGCD01067937;GBDI01107256;XM_005409162;XM_005409163;XM_013507003;XM_013507004 XP_005409219;XP_005409220;XP_013362457;XP_013362458 MODEL 8878480 ncrna LOC102005341 uncharacterized LOC102005341 NW_004955408 8988844 8997598 - 102005341 AGCD01008230;GBDF01277633;XR_259674 MODEL 39133499 snrna U4 U4 spliceosomal RNA 8725364 protein-coding Irx5 iroquois homeobox 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); embryonic cranial skeleton morphogenesis (ortholog); gonad development (ortholog); ASSOCIATED WITH anodontia (ortholog); Bone Fractures (ortholog); congenital heart disease (ortholog) NW_004955433 12518786 12522744 + 102010086 AGCD01031665;AGCD01031666;GBBH01077587;GBDF01227473;XM_013516246 XP_013371700 MODEL 8770681 ncrna LOC102022546 uncharacterized LOC102022546 NW_004955552 1838636 1865550 - 102022546 AGCD01072789;AGCD01072790;AGCD01072791;GBDI01143786;XR_001232278;XR_264926 MODEL 39131608 rrna 5S_rRNA 5S ribosomal RNA 8788473 protein-coding Tubb6 tubulin beta 6 class V ASSOCIATED WITH Congenital Facial Palsy with Ptosis and Velopharyngeal Dysfunction (ortholog); Experimental Liver Cirrhosis (ortholog); ptosis (ortholog); FOUND IN microtubule (ortholog) NW_004955402 1071135 1081385 - 102013231 AGCD01000046;GBDJ01221777;XM_005372569;XM_005372572 XP_005372626;XP_005372629 MODEL 39134409 misc_rna 7SK 7SK RNA 8998473 protein-coding Atxn2 ataxin 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); INVOLVED IN cerebellar Purkinje cell differentiation (ortholog); homeostasis of number of cells (ortholog); negative regulation of multicellular organism growth (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); genetic disease (ortholog); late onset Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); Golgi apparatus (ortholog) NW_004955482 8101410 8187815 - 102028635 AGCD01057503;AGCD01057504;AGCD01057505;AGCD01057506;AGCD01057507;AGCD01057508;AGCD01057509;AGCD01057510;GBDI01131383;XM_013503648 XP_013359102 MODEL 8866655 protein-coding LOC102020053 olfactory receptor 12-like NW_004955542 1204031 1204996 - 102020053 AGCD01071493;XM_005411171 XP_005411228 MODEL 8761523 pseudo LOC102018191 elongation factor 1-alpha 1-like NW_004955487 4175137 4176506 - 102018191 AGCD01059300 MODEL 39134095 misc_rna 7SK 7SK RNA 8974484 protein-coding Ambn ameloblastin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN cell adhesion (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 1F (ortholog) NW_004955447 2363240 2374827 - 102025523 AGCD01040538;XM_005392786;XM_013518494 XP_005392843;XP_013373948 MODEL 39132409 snrna U6 U6 spliceosomal RNA 8773177 protein-coding Klc1 kinesin light chain 1 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); intracellular protein transport (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Leukoaraiosis (ortholog); relapsing-remitting multiple sclerosis (ortholog); FOUND IN axon (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) NW_004955538 2462491 2503398 + 102015145 AGCD01071127;GBBH01032249;XM_005410798;XM_005410799;XM_005410800;XM_005410801;XM_005410803;XM_005410805;XM_005410807;XM_013507851;XM_013507852;XR_001232088;XR_001232089 XP_005410855;XP_005410856;XP_005410857;XP_005410858;XP_005410860;XP_005410862;XP_005410864;XP_013363305;XP_013363306 MODEL 10210364 ncrna LOC106150124 uncharacterized LOC106150124 NW_004955465 10713576 10715667 - 106150124 AGCD01050512;XR_001236743 MODEL 8782463 protein-coding Sfxn3 sideroflexin 3 ENCODES a protein that exhibits L-serine transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial transmembrane transport (ortholog); one-carbon metabolic process (ortholog); serine import into mitochondrion (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955485 9157657 9165243 - 102028972 AGCD01058748;AGCD01058749;GBBH01035640;GBBH01035644;XM_005403880 XP_005403937 MODEL 9034821 protein-coding Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator INVOLVED IN negative regulation of angiogenesis (ortholog); positive regulation of endothelial cell apoptotic process (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 1 (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955418 1108805 1116338 + 102018288 AGCD01018709;GBCE01053616;XM_005382071;XM_013512910 XP_005382128;XP_013368364 MODEL 39133590 snrna U2 U2 spliceosomal RNA 8707955 protein-coding Flt3lg fms related receptor tyrosine kinase 3 ligand ENCODES a protein that exhibits identical protein binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); dendritic cell differentiation (ortholog); embryonic hemopoiesis (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); colon carcinoma (ortholog); Fanconi anemia (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955559 1364056 1371245 - 102014503 AGCD01073641;GBBH01091697;XM_013509008;XM_013509009;XM_013509010;XM_013509011;XM_013509012;XM_013509013;XM_013509014;XM_013509015;XM_013509016;XM_013509017 XP_013364462;XP_013364463;XP_013364464;XP_013364465;XP_013364466;XP_013364467;XP_013364468;XP_013364469;XP_013364470;XP_013364471 MODEL 8835135 protein-coding Atf4 activating transcription factor 4 ENCODES a protein that exhibits cAMP response element binding (ortholog); cAMP response element binding protein binding (ortholog); DNA binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH borna disease (ortholog); Hypoxia (ortholog); invasive ductal carcinoma (ortholog); FOUND IN ATF1-ATF4 transcription factor complex (ortholog); ATF4-CREB1 transcription factor complex (ortholog); centrosome (ortholog) NW_004955413 25406589 25408727 + 102004467 AGCD01014405;GBDJ01240104;XM_005379299 XP_005379356 MODEL 8823749 protein-coding Bnc1 basonuclin zinc finger protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); rDNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); positive regulation of epithelial cell proliferation (ortholog); positive regulation of oocyte maturation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); primary ovarian insufficiency (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955416 13428760 13440837 + 102003125 AGCD01017223;GBBH01128516;XM_005381464 XP_005381521 MODEL 8736136 protein-coding Hfm1 helicase for meiosis 1 INVOLVED IN resolution of meiotic recombination intermediates (ortholog); ASSOCIATED WITH azoospermia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955423 2993723 3088391 + 102028767 AGCD01023496;AGCD01023497;AGCD01023498;AGCD01023499;AGCD01023500;AGCD01023501;GBDF01277410;XM_005385067;XM_013514356;XM_013514357 XP_005385124;XP_013369810;XP_013369811 MODEL 8752489 ncrna LOC102015150 uncharacterized LOC102015150 NW_004955438 16894210 16895713 - 102015150 AGCD01035425;GBDF01025286;XR_261940 MODEL 8893516 pseudo LOC102005342 COP9 signalosome complex subunit 8 pseudogene NW_004955457 11873480 11874149 - 102005342 AGCD01046991 MODEL 8936219 ncrna LOC102006097 uncharacterized LOC102006097 NW_004955456 4283151 4286706 - 102006097 AGCD01046296;GBDF01251661;XR_262881 MODEL 39133500 snrna U4 U4 spliceosomal RNA 8786859 protein-coding Plin3 perilipin 3 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN lipid droplet (ortholog) NW_004955495 4177701 4190052 + 102003035 AGCD01061900;AGCD01061901;GBDF01047898;XM_005405777;XM_013505193;XM_013505194 XP_005405834;XP_013360647;XP_013360648 MODEL 8738591 protein-coding Gpr137 G protein-coupled receptor 137 FOUND IN lysosomal membrane (ortholog) NW_004955422 20791144 20795451 - 102016283 AGCD01023087;GBDF01002326;XM_005384621;XM_013514297 XP_005384678;XP_013369751 MODEL 8892349 protein-coding Tsnare1 t-SNARE domain containing 1 NW_004955454 743022 1203483 - 102020635 AGCD01044960;AGCD01044961;AGCD01044962;AGCD01044963;AGCD01044964;AGCD01044965;GBDF01179211;XM_013520010 XP_013375464 MODEL 8968938 ncrna LOC102017436 uncharacterized LOC102017436 NW_004955413 484789 494226 + 102017436 AGCD01013472;GBDF01112932;XR_260045 MODEL 8845450 protein-coding Tipin TIMELESS interacting protein INVOLVED IN cell cycle phase transition (ortholog); DNA damage checkpoint signaling (ortholog); DNA replication checkpoint signaling (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955450 9259838 9279479 + 102029924 AGCD01042589;GBDF01222347;XM_005415299;XM_013518980 XP_005415356;XP_013374434 MODEL 8809307 protein-coding Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); protein K11-linked ubiquitination (ortholog); protein K33-linked ubiquitination (ortholog); FOUND IN cytosol (ortholog) NW_004955523 818535 874189 + 102017051 AGCD01068481;AGCD01068482;AGCD01068483;AGCD01068484;AGCD01068485;GBDF01006052;XM_005409388;XM_005409389;XM_005409390;XM_013507172 XP_005409445;XP_005409446;XP_005409447;XP_013362626 MODEL 8833359 protein-coding Rgs17 regulator of G protein signaling 17 INVOLVED IN response to amphetamine (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) NW_004955439 8687775 8805229 + 102025048 AGCD01035806;AGCD01035807;AGCD01035808;AGCD01035809;AGCD01035810;AGCD01035811;AGCD01035812;AGCD01035813;GBDF01116147;XM_005390564;XM_005390565;XM_013517293 XP_005390621;XP_005390622;XP_013372747 MODEL 8891580 protein-coding Agtr1 angiotensin II receptor type 1 ENCODES a protein that exhibits angiotensin type I receptor activity (ortholog); angiotensin type II receptor activity (ortholog); bradykinin receptor binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); angiotensin-activated signaling pathway (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Alveolar Bone Loss (ortholog); Alzheimer's disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasmic vesicle (ortholog); dendrite (ortholog) NW_004955474 8733942 8781305 - 102016153 AGCD01054560;AGCD01054561;GBCB01076032;XM_005401426;XM_013502791;XR_001230743 XP_005401483;XP_013358245 MODEL 8877634 protein-coding Tram1 translocation associated membrane protein 1 INVOLVED IN cotranslational protein targeting to membrane (ortholog); protein insertion into ER membrane (ortholog); response to unfolded protein (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955444 9110533 9153585 + 102030248 AGCD01038959;AGCD01038960;AGCD01038961;GBDK01002034;XM_005392105 XP_005392162 MODEL 9016285 protein-coding LOC102021546 NKG2-A/NKG2-B type II integral membrane protein-like NW_004955413 7564558 7569806 + 102021546 AGCD01013823;GBDK01253184;XM_005379621 XP_005379678 MODEL 8990598 protein-coding Faslg Fas ligand ENCODES a protein that exhibits cytokine activity (ortholog); death receptor binding (ortholog); tumor necrosis factor receptor binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to type II interferon (ortholog); endosomal lumen acidification (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Experimental Pancreatitis (ortholog); Acute Hepatitis (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955406 13098479 13107045 + 102003617 AGCD01005932;GBDK01238818;XM_005374864;XM_013520746 XP_005374921;XP_013376200 MODEL 9001011 protein-coding Dnase1 deoxyribonuclease 1 ENCODES a protein that exhibits deoxyribonuclease I activity (ortholog); DNA nuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); neutrophil activation involved in immune response (ortholog); regulation of acute inflammatory response (ortholog); ASSOCIATED WITH Airway Obstruction (ortholog); autoimmune hepatitis (ortholog); primary biliary cholangitis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955442 13733107 13736527 - 102018654 AGCD01037786;GBDF01075523;XM_005391319;XM_005391320;XM_013517804;XM_013517806 XP_005391376;XP_005391377;XP_013373258;XP_013373260 MODEL 8805325 protein-coding Wdr97 WD repeat domain 97 NW_004955454 2769356 2778024 + 102023430 AGCD01045033;GBCB01051894;XM_005395848;XM_013520172;XM_013520173;XM_013520174;XM_013520175;XR_001236234 XP_005395905;XP_013375626;XP_013375627;XP_013375628;XP_013375629 MODEL 8734909 protein-coding LOC102007157 hemoglobin subunit alpha-3-like NW_004955442 17010737 17011588 - 102007157 AGCD01037931;GBDI01342197;XM_005391673 XP_005391730 MODEL 9047212 protein-coding Hoxa3 homeobox A3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); HMG box domain binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ formation (ortholog); animal organ morphogenesis (ortholog); ASSOCIATED WITH congenital heart disease (ortholog); Craniofacial Abnormalities (ortholog); DiGeorge syndrome (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955410 28801918 28846605 - 102004147 AGCD01011259;AGCD01011260;AGCD01011261;XM_005377453;XM_005377456;XM_013510610;XM_013510611;XM_013510612;XM_013510613 XP_005377510;XP_005377513;XP_013366064;XP_013366065;XP_013366066;XP_013366067 MODEL 9004211 protein-coding Pdzrn3 PDZ domain containing ring finger 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN neuromuscular junction development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog); Dwarfism (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); neuromuscular junction (ortholog) NW_004955421 14648436 14878759 + 102026121 AGCD01021959;AGCD01021960;AGCD01021961;GBBH01126566;GBCE01169321;XM_013513763 XP_013369217 MODEL 8791731 protein-coding Cbr1 carbonyl reductase 1 ENCODES a protein that exhibits carbonyl reductase (NADPH) activity (ortholog); oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (ortholog); oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); glucocorticoid metabolic process (ortholog); positive regulation of reactive oxygen species metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cardiomyopathy (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955407 35351601 35354510 - 102008183 AGCD01007739;GBCB01024477;XM_005375726 XP_005375783 MODEL 8824520 pseudo LOC102003610 DCN1-like protein 1 pseudogene NW_004955757 39 601 + 102003610 AGCD01078282 MODEL 9039046 pseudo LOC102012573 40S ribosomal protein S11-like NW_004955526 2916961 2917447 + 102012573 AGCD01069324 MODEL 8859207 protein-coding Ptpn2 protein tyrosine phosphatase non-receptor type 2 ENCODES a protein that exhibits integrin binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); erythrocyte differentiation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH Crohn's disease (ortholog); pre-eclampsia (ortholog); rheumatoid arthritis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955402 771410 846671 + 102008478 AGCD01000033;AGCD01000034;GBCE01096711;XM_005372550;XM_013513054;XM_013513107;XM_013513139;XM_013513163;XM_013513183;XM_013513207;XM_013513238;XM_013513272;XM_013513296;XM_013513319;XM_013513343 XP_005372607;XP_013368508;XP_013368561;XP_013368593;XP_013368617;XP_013368637;XP_013368661;XP_013368692;XP_013368726;XP_013368750;XP_013368773;XP_013368797 MODEL 9056035 protein-coding Adcy4 adenylate cyclase 4 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; FOUND IN cytoplasm (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955409 35966529 35982839 + 102030158 AGCD01010437;AGCD01010438;GBBH01227879;GBCE01034250;XM_005377013 XP_005377070 MODEL 39134410 misc_rna 7SK 7SK RNA 8811986 protein-coding Tubd1 tubulin delta 1 INVOLVED IN cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH polydactyly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955451 3225728 3249013 + 102011494 AGCD01043048;AGCD01043049;AGCD01043050;GBBH01138856;XM_005393974;XM_005393975;XM_005393976;XM_005393977 XP_005394031;XP_005394032;XP_005394033;XP_005394034 MODEL 8773303 pseudo LOC102020054 testis-expressed sequence 37 protein-like NW_004955439 2677888 2678876 - 102020054 AGCD01035657 MODEL 8732285 protein-coding Chmp1b charged multivesicular body protein 1B ENCODES a protein that exhibits identical protein binding (ortholog); MIT domain binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cell division (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); endosome membrane (ortholog) NW_004955402 1196912 1199480 - 102015902 AGCD01000051;GBBH01206444;XM_005372575 XP_005372632 MODEL 9001139 ncrna LOC102024234 uncharacterized LOC102024234 NW_004955420 11214960 11288694 - 102024234 AGCD01020801;GBBH01078303;XR_260703 MODEL 39134096 misc_rna 7SK 7SK RNA 9013323 ncrna LOC102010922 uncharacterized LOC102010922 NW_004955425 2114106 2208490 - 102010922 AGCD01025251;AGCD01025252;AGCD01025253;AGCD01025254;AGCD01025255;GBDF01075868;XR_001234279;XR_001234280;XR_001234281;XR_001234282;XR_001234283 MODEL 9049971 pseudo LOC102019758 alpha-enolase pseudogene NW_004955597 152521 155630 + 102019758 AGCD01076545 MODEL 8991758 protein-coding Klc2 kinesin light chain 2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); lysosome localization (ortholog); ASSOCIATED WITH nonsyndromic deafness (ortholog); SPOAN syndrome (ortholog); FOUND IN ciliary rootlet (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 19047942 19057153 - 102019403 AGCD01022973;GBDJ01182843;XM_005384430;XM_013514008;XM_013514009 XP_005384487;XP_013369462;XP_013369463 MODEL 8924130 protein-coding Tiprl TOR signaling pathway regulator ENCODES a protein that exhibits protein phosphatase inhibitor activity (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog) NW_004955462 8921678 8939785 - 102018696 AGCD01049331;GBDF01003611;XM_005398209;XM_005398210;XM_005398213 XP_005398266;XP_005398267;XP_005398270 MODEL 8931454 protein-coding Bcap29 B cell receptor associated protein 29 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); protein localization to endoplasmic reticulum exit site (ortholog) NW_004955410 11934158 11988479 + 102006104 AGCD01010838;AGCD01010839;AGCD01010840;GBDF01083953;XM_005377284 XP_005377341 MODEL 8873994 ncrna LOC102022552 uncharacterized LOC102022552 NW_004955402 19749867 19763274 - 102022552 AGCD01000567;GBDF01262712;XR_259059 MODEL 8876359 protein-coding Ggact gamma-glutamylamine cyclotransferase ENCODES a protein that exhibits gamma-glutamylaminecyclotransferase activity (ortholog); INVOLVED IN modified amino acid catabolic process (ortholog) NW_004955404 10280013 10316531 + 102007496 AGCD01003377;AGCD01003378;GBDF01276939;XM_005374044;XM_005374045;XM_005374046;XM_005374047;XM_005374048;XM_005374049;XM_005374050;XM_005374051;XM_013516034;XM_013516040;XM_013516046 XP_005374101;XP_005374102;XP_005374103;XP_005374104;XP_005374105;XP_005374106;XP_005374107;XP_005374108;XP_013371488;XP_013371494;XP_013371500 MODEL 39133592 snrna U2 U2 spliceosomal RNA 8749783 protein-coding LOC102015152 thyroid receptor-interacting protein 11-like NW_004955438 16476383 16482655 + 102015152 AGCD01035418;GBDF01213148;XM_013517162 XP_013372616 MODEL 8959626 protein-coding Atf5 activating transcription factor 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cerebellar granule cell precursor proliferation (ortholog); circadian rhythm (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); Huntington's disease (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955559 1008208 1013023 - 102027351 AGCD01073626;GBDJ01277413;XM_005412814 XP_005412871 MODEL 8728733 ncrna LOC102006098 uncharacterized LOC102006098 NW_004955456 14622794 14651850 - 102006098 AGCD01046645;AGCD01046646;GBDF01252370;XR_001236327;XR_001236328;XR_001236329;XR_001236330;XR_262904;XR_262905 MODEL 9064688 protein-coding Atxn2l ataxin 2 like INVOLVED IN mRNA metabolic process (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955493 6626106 6637678 - 102017248 AGCD01061122;GBCQ01042325;GBDI01008267;XM_013504810;XM_013504811;XM_013504812;XM_013504813;XR_001231274 XP_013360264;XP_013360265;XP_013360266;XP_013360267 MODEL 8805867 ncrna LOC102018192 uncharacterized LOC102018192 NW_004955491 8497950 8499449 - 102018192 AGCD01060616;GBDF01057299;XR_264041;XR_264042 MODEL 9065919 ncrna LOC102010129 uncharacterized LOC102010129 NW_004955457 12742119 12748992 + 102010129 AGCD01047026;GBCB01083718;XR_262945 MODEL 10307036 ncrna LOC106150125 uncharacterized LOC106150125 NW_004955465 9142088 9143139 + 106150125 AGCD01050485;GBDF01235627;XR_001236744 MODEL 8862851 protein-coding Tsnax translin associated factor X ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); protein-containing complex binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN siRNA processing (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955492 7304982 7335512 - 102006784 AGCD01060784;AGCD01060785;AGCD01060786;GBDF01124616;XM_005404969;XM_013504735 XP_005405026;XP_013360189 MODEL 8857044 protein-coding Ambp alpha-1-microglobulin/bikunin precursor ENCODES a protein that exhibits antioxidant activity (ortholog); carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to reactive oxygen species (ortholog); cytochrome c metabolic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN extracellular space; cell surface (ortholog); matrix side of mitochondrial inner membrane (ortholog) NW_004955419 13478904 13492329 + 102017455 AGCD01020004;GBDK01342688;XM_005382656 XP_005382713 MODEL 39132410 snrna U6 U6 spliceosomal RNA 8932825 protein-coding Chmp2a charged multivesicular body protein 2A ENCODES a protein that exhibits membrane bending activity (ortholog); phosphatidylcholine binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); establishment of protein localization (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); chromatin (ortholog) NW_004955584 1156828 1160056 - 102021404 AGCD01075982;GBDF01047694;XM_005414402;XM_005414403;XM_013509884 XP_005414459;XP_005414460;XP_013365338 MODEL 8761709 protein-coding Sfxn5 sideroflexin 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); INVOLVED IN citrate transport (ortholog); positive regulation of cold-induced thermogenesis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955424 12545985 12659238 + 102020027 AGCD01024614;AGCD01024615;AGCD01024616;AGCD01024617;GBCE01013411;XM_005385576;XM_005385577;XM_005385578;XM_013514690 XP_005385633;XP_005385634;XP_005385635;XP_013370144 MODEL 8942620 protein-coding Rgs18 regulator of G protein signaling 18 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) NW_004955406 29573127 29594991 + 102016232 AGCD01006335;GBDK01432974;XM_005375096 XP_005375153 MODEL 39133501 snrna U4 U4 spliceosomal RNA 8782359 protein-coding Flt4 fms related receptor tyrosine kinase 4 ENCODES a protein that exhibits growth factor binding (ortholog); protein homodimerization activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); lung alveolus development (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); receptor complex (ortholog) NW_004955408 98995 137922 + 102025873 AGCD01007908;AGCD01007909;GBCE01084871;XM_013507813 XP_013363267 MODEL 8802824 protein-coding LOC102007158 histone-binding protein RBBP7-like NW_004955558 643112 644737 + 102007158 AGCD01073381;XM_013508855 XP_013364309 MODEL 10131559 protein-coding Plin4 perilipin 4 ASSOCIATED WITH Vacuolar Neuromyopathy (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog); plasma membrane (ortholog) NW_004955495 4417672 4426945 + 106146790 AGCD01061922;GBDK01147195;XM_013505186;XM_013505187 XP_013360640;XP_013360641 MODEL 8870672 ncrna LOC102022555 uncharacterized LOC102022555 NW_004955450 3762810 3767772 + 102022555 AGCD01042444;GBDF01250880;XR_001235838 MODEL 39133594 snrna U2 U2 spliceosomal RNA 8788361 protein-coding Cbr3 carbonyl reductase 3 ENCODES a protein that exhibits 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); carbonyl reductase (NADPH) activity (ortholog); NADPH binding (ortholog); INVOLVED IN cognition (ortholog); phylloquinone catabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Familial Platelet Disorder with Associated Myeloid Malignancy (ortholog); Mouth Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955407 35419674 35428270 + 102007301 AGCD01007742;GBDI01006352;XM_005375724;XM_013504553 XP_005375781;XP_013360007 MODEL 10128912 ncrna LOC106147153 uncharacterized LOC106147153 NW_004955523 1589987 1603096 + 106147153 AGCD01068529;AGCD01068530;AGCD01068531;GBDJ01304796;XR_001231922 MODEL 39133825 misc_rna 7SK 7SK RNA 8935420 ncrna LOC102020055 uncharacterized LOC102020055 NW_004955441 8775927 8779401 - 102020055 AGCD01036992;GBDF01067304;XR_262061 MODEL 9005830 protein-coding LOC102024236 uncharacterized LOC102024236 NW_004955486 4140771 4144719 - 102024236 AGCD01059055;GBDI01207893;GBDK01042435;XM_013504281 XP_013359735 MODEL 9008593 protein-coding Irx6 iroquois homeobox 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN detection of visible light (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog) NW_004955433 12889025 12895090 + 102004310 AGCD01031672;GBDF01290846;XM_005388314;XM_005388315 XP_005388371;XP_005388372 MODEL 8825045 protein-coding Ecsit ECSIT signaling integrator ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); mesoderm formation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial complex I intermediate assembly complex (ortholog) NW_004955495 2375992 2385962 - 102025021 AGCD01061769;GBBH01098612;XM_005405668;XM_013505114;XM_013505115 XP_005405725;XP_013360568;XP_013360569 MODEL 8808737 protein-coding Dnase1l1 deoxyribonuclease 1 like 1 ASSOCIATED WITH Emery-Dreifuss muscular dystrophy (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955580 907056 913604 - 102029341 AGCD01075629;GBDK01190187;XM_005414193 XP_005414250 MODEL 8776015 protein-coding Tram1l1 translocation associated membrane protein 1 like 1 NW_004955428 22645718 22647763 + 102027208 AGCD01028192;GBBH01122847;GBCE01049874;XM_005386808 XP_005386865 MODEL 9059073 trna Trnai-uau transfer RNA isoleucine (anticodon UAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955468;NW_004955465;NW_004955441;NW_004955483 149799;13289424;10151035;194221 149891;13289517;10151126;194314 +;+;+;- 101978796 AGCD01037076;AGCD01050597;AGCD01051684;AGCD01057602 MODEL 8720242 protein-coding Hgd homogentisate 1,2-dioxygenase ENCODES a protein that exhibits homogentisate 1,2-dioxygenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); L-tyrosine catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH alkaptonuria (ortholog); Alkaptonuric Ochronosis (ortholog); genetic disease (ortholog) NW_004955427 20141522 20188700 - 102025268 AGCD01027394;GBDJ01267025;XM_005386468 XP_005386525 MODEL 8742257 protein-coding Bcap31 B cell receptor associated protein 31 ENCODES a protein that exhibits MHC class I protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); obsolete protein targeting to mitochondrion (ortholog); positive regulation of ERAD pathway (ortholog); ASSOCIATED WITH deafness, dystonia, and cerebral hypomyelination (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955580 429223 459168 - 102015790 AGCD01075606;AGCD01075607;GBBH01032180;XM_005414141 XP_005414198 MODEL 8817137 protein-coding LOC102005343 cytochrome P450 2J2-like NW_004955457 13519513 13582133 + 102005343 AGCD01047047;AGCD01047048;AGCD01047049;GBCB01120042;XM_013520668 XP_013376122 MODEL 8943256 protein-coding Fasn fatty acid synthase ENCODES a protein that exhibits (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (ortholog); 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); [acyl-carrier-protein] S-acetyltransferase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cell development (ortholog); cellular response to interleukin-4 (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fatty acid synthase complex (ortholog) NW_004955506 1063002 1079939 + 102015030 AGCD01065242;GBDF01082381;XM_005407214 XP_005407271 MODEL 8860303 protein-coding Gpr137b G protein-coupled receptor 137B INVOLVED IN negative regulation of bone resorption (ortholog); negative regulation of osteoclast differentiation (ortholog); positive regulation of protein localization to lysosome (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955492 3916536 3952330 - 102022304 AGCD01060705;GBCB01036034;GBCQ01032242;XM_005405014 XP_005405071 MODEL 8957084 protein-coding LOC102003611 BPI fold-containing family C protein-like NW_004957015 28 1202 - 102003611 AGCD01080411;XM_005415219 XP_005415276 MODEL 39132182 rrna 5S_rRNA 5S ribosomal RNA 39131609 rrna 5S_rRNA 5S ribosomal RNA 8957362 protein-coding Arf1 ARF GTPase 1 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin filament organization (ortholog); dendritic spine organization (ortholog); Golgi to plasma membrane transport (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute pancreatitis (ortholog); Breast Neoplasms (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cell leading edge (ortholog); COPI-coated vesicle (ortholog); cytosol (ortholog) NW_004955581 319942 335112 - 102015903 AGCD01075667;GBDF01010336;XM_005414242 XP_005414299 MODEL 9055652 pseudo LOC102010929 transcriptional repressor protein YY1-like NW_004955429 4787838 4789119 - 102010929 AGCD01028496 MODEL 8911879 protein-coding LOC102006100 TIR domain-containing adapter molecule 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of chemokine (C-C motif) ligand 5 production (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) NW_004955408 35342733 35382821 - 102006100 AGCD01008938;AGCD01008939;GBBH01033904;GBDK01342442;XM_005376595 XP_005376652 MODEL 8785225 protein-coding Agtr2 angiotensin II receptor type 2 ENCODES a protein that exhibits angiotensin type II receptor activity (ortholog); transcription factor binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); brain renin-angiotensin system (ortholog); PARTICIPATES IN angiotensin II signaling pathway; angiotensin II signaling pathway via AT2 receptor; angiotensin III signaling pathway; ASSOCIATED WITH AIDS-Associated Nephropathy (ortholog); Alveolar Bone Loss (ortholog); asthma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955534 3653112 3654248 - 102021704 AGCD01070589;XM_013507702 XP_013363156 MODEL 8741113 protein-coding LOC102019760 disintegrin and metalloproteinase domain-containing protein 20-like NW_004955403 32084751 32088414 - 102019760 AGCD01002429;GBDF01008556;XM_005373527 XP_005373584 MODEL 10286459 ncrna LOC106150126 uncharacterized LOC106150126 NW_004955406 30062744 30261679 - 106150126 AGCD01006357;AGCD01006358;AGCD01006359;AGCD01006360;AGCD01006361;AGCD01006362;AGCD01006363;GBDI01202678;XR_001236748 MODEL 8852521 protein-coding Wdsub1 WD repeat, sterile alpha motif and U-box domain containing 1 ASSOCIATED WITH autistic disorder (ortholog) NW_004955449 14301798 14348735 + 102006968 AGCD01042164;GBDI01172204;XM_005393376;XM_005393377;XM_013518706;XM_013518707;XR_001235809 XP_005393433;XP_005393434;XP_013374160;XP_013374161 MODEL 8785655 protein-coding Klc3 kinesin light chain 3 ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); sperm mitochondrial sheath assembly (ortholog); spermatid development (ortholog); FOUND IN ciliary rootlet (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) NW_004955555 2346241 2355529 + 102010420 AGCD01073148;GBCE01169285;XM_005412517;XM_005412518;XM_005412519;XM_005412520;XM_013508702;XM_013508703;XM_013508704 XP_005412574;XP_005412575;XP_005412576;XP_005412577;XP_013364156;XP_013364157;XP_013364158 MODEL 8996353 protein-coding Ambra1 autophagy and beclin 1 regulator 1 ENCODES a protein that exhibits GTPase binding (ortholog); protein phosphatase activator activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN inositol metabolic pathway; mitochondrial autophagy pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); esophageal atresia (ortholog); multiple system atrophy (ortholog); FOUND IN axoneme (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955422 1455392 1644368 + 102007023 AGCD01022460;AGCD01022461;AGCD01022462;AGCD01022463;AGCD01022464;AGCD01022465;AGCD01022466;AGCD01022467;GBCQ01139667;XM_005384021;XM_005384022;XM_005384023;XM_005384024;XM_005384025 XP_005384078;XP_005384079;XP_005384080;XP_005384081;XP_005384082 MODEL 8834957 protein-coding Bnc2 basonuclin zinc finger protein 2 ENCODES a protein that exhibits DNA binding (ortholog); rDNA binding (ortholog); INVOLVED IN endochondral bone growth (ortholog); mesenchyme development (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cleft palate (ortholog); Congenital Lower Urinary Tract Obstruction (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nuclear body (ortholog) NW_004955434 19156746 19568983 - 102021793 AGCD01032583;AGCD01032584;AGCD01032585;AGCD01032586;AGCD01032587;AGCD01032588;AGCD01032589;GBDJ01273240;XM_005388715;XM_005388716;XM_005388717;XM_005388718;XM_005388719;XM_013516364;XM_013516365 XP_005388772;XP_005388773;XP_005388774;XP_005388775;XP_005388776;XP_013371818;XP_013371819 MODEL 8892616 protein-coding Hoxa4 homeobox A4 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nuclear body (ortholog) NW_004955410 28822814 28827294 - 102025884 AGCD01011260;AGCD01011261;GBCQ01176053;GBDF01221263;XM_013510609 XP_013366063 MODEL 8980427 protein-coding Chmp2b charged multivesicular body protein 2B ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cognition (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); frontotemporal dementia (ortholog); frontotemporal dementia and/or amyotrophic lateral sclerosis 7 (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955407 6014478 6047916 - 102026186 AGCD01006940;AGCD01006941;AGCD01006942;GBBH01142066;XM_005375538 XP_005375595 MODEL 8763126 protein-coding Ggct gamma-glutamylcyclotransferase ENCODES a protein that exhibits gamma-glutamylcyclotransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN release of cytochrome c from mitochondria (ortholog); PARTICIPATES IN glutathione metabolic pathway; glutathione synthase deficiency pathway; glutathionuria disease pathway; FOUND IN cytosol (ortholog) NW_004955410 31732272 31739020 - 102020538 AGCD01011331;GBDI01325753;XM_005377500 XP_005377557 MODEL 9044804 protein-coding Isca1 iron-sulfur cluster assembly 1 INVOLVED IN protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH multiple mitochondrial dysfunctions syndrome (ortholog); multiple mitochondrial dysfunctions syndrome 5 (ortholog); FOUND IN mitochondrial [4Fe-4S] assembly complex (ortholog); mitochondrion (ortholog) NW_004955432 1335481 1349852 + 102024152 AGCD01030592;GBDF01006902;XM_005387916 XP_005387973 MODEL 39133502 snrna U4 U4 spliceosomal RNA 8806509 protein-coding Ptpn20 protein tyrosine phosphatase non-receptor type 20 FOUND IN centriolar satellite (ortholog) NW_004955556 1850933 1943318 + 102010842 AGCD01073204;AGCD01073205;AGCD01073206;GBBH01151275;XM_005412599;XM_005412600;XM_005412601;XM_005412602;XM_005412603;XM_005412604;XM_005412605;XM_005412606;XM_005412607;XM_005412608;XM_005412609;XM_013508810 XP_005412656;XP_005412657;XP_005412658;XP_005412659;XP_005412660;XP_005412661;XP_005412662;XP_005412663;XP_005412664;XP_005412665;XP_005412666;XP_013364264 MODEL 8861832 protein-coding Rgs19 regulator of G protein signaling 19 ENCODES a protein that exhibits actin binding (ortholog); G-protein alpha-subunit binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); chemical synaptic transmission (ortholog); endothelial cell migration (ortholog); FOUND IN brush border (ortholog); cell junction (ortholog); clathrin-coated vesicle (ortholog) NW_004955528 183067 185703 + 102022632 AGCD01069514;GBCE01116836;GBDJ01317429;XM_013507518 XP_013362972 MODEL 8920491 protein-coding LOC102015156 cytochrome c oxidase assembly protein COX14 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 10 (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955547 690167 690777 + 102015156 AGCD01072172;GBCB01000539;XM_005411876 XP_005411933 MODEL 8773820 protein-coding Adcy6 adenylate cyclase 6 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; glucagon signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Lethal Congenital Contracture Syndrome 8 (ortholog); ureteral obstruction (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); microvillus membrane (ortholog) NW_004955500 7635946 7655579 - 102003260 AGCD01063937;AGCD01063938;GBCQ01036618;XM_005406653;XM_005406656;XM_005406657;XM_005406658;XM_005406659 XP_005406710;XP_005406713;XP_005406714;XP_005406715;XP_005406716 MODEL 8774005 protein-coding Flvcr1 FLVCR choline and heme transporter 1 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); heme B transmembrane transporter activity (ortholog); INVOLVED IN blood vessel development (ortholog); choline transport (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); Diamond-Blackfan anemia (ortholog); fundus dystrophy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955406 4673797 4702858 - 102013798 AGCD01005699;AGCD01005700;AGCD01005701;GBCE01057352;GBDI01219305;XM_013520040;XM_013520050 XP_013375494;XP_013375504 MODEL 39134097 misc_rna 7SK 7SK RNA 8703620 protein-coding Plin5 perilipin 5 ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN cell activation (ortholog); gene expression (ortholog); intracellular signaling cassette (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955495 4406590 4414783 + 102008639 AGCD01061922;GBCB01043643;XM_013505191;XM_013505192 XP_013360645;XP_013360646 MODEL 8893517 ncrna LOC102005345 uncharacterized LOC102005345 NW_004955460 7260247 7263228 + 102005345 AGCD01048480;GBDF01208870;XR_263036 MODEL 8793760 protein-coding Atf6 activating transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); enzyme binding (ortholog); INVOLVED IN eye development (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of ATF6-mediated unfolded protein response (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH achromatopsia (ortholog); achromatopsia 7 (ortholog); asbestosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fibrillar center (ortholog) NW_004955462 14352956 14553299 - 102005451 AGCD01049445;AGCD01049446;AGCD01049447;AGCD01049448;AGCD01049449;AGCD01049450;GBDJ01424155;XM_005398327 XP_005398384 MODEL 8973471 protein-coding LOC102021547 olfactory receptor 52K1-like NW_004955414 20116732 20117685 + 102021547 AGCD01015358;XM_005380464 XP_005380521 MODEL 39133595 snrna U2 U2 spliceosomal RNA 8967050 protein-coding Atxn3 ataxin 3 ENCODES a protein that exhibits ATPase binding (ortholog); cysteine-type deubiquitinase activity (ortholog); histone deacetylase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to amino acid starvation (ortholog); cellular response to heat (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH atrophic muscular disease (ortholog); Cataplexy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955438 14405415 14443457 - 102024385 AGCD01035345;AGCD01035346;GBBH01096128;XM_005390322;XM_013517193;XM_013517194;XM_013517196;XM_013517197;XM_013517198;XR_001235139;XR_261931 XP_005390379;XP_013372647;XP_013372648;XP_013372650;XP_013372651;XP_013372652 MODEL 39133826 misc_rna 7SK 7SK RNA 39131610 rrna 5S_rRNA 5S ribosomal RNA 8754136 protein-coding Sgca sarcoglycan alpha INVOLVED IN response to denervation involved in regulation of muscle adaptation (ortholog); skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); FOUND IN cell-cell junction (ortholog); dystroglycan complex (ortholog); membrane raft (ortholog) NW_004955451 11490891 11501618 - 102012394 AGCD01043355;AGCD01043356;GBCQ01015636;GBDI01122074;XM_013519105 XP_013374559 MODEL 9038005 protein-coding Pdzrn4 PDZ domain containing ring finger 4 ASSOCIATED WITH silicosis (ortholog) NW_004955500 638027 1007585 + 102029643 AGCD01063640;AGCD01063641;GBCE01168746;XM_005406572;XM_013505727 XP_005406629;XP_013361181 MODEL 8792457 ncrna LOC102012575 uncharacterized LOC102012575 NW_004955437 2310695 2312191 + 102012575 AGCD01034263;XR_261833 MODEL 8826702 protein-coding LOC102017437 apolipoprotein L3-like NW_004955413 22721494 22730578 - 102017437 AGCD01014313;GBDK01123046;XM_013511284;XR_001232942 XP_013366738 MODEL 8709743 trna Trnak-cuu transfer RNA lysine (anticodon CUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978827 AGCD01037806;AGCD01051106;AGCD01057606;AGCD01069830;AGCD01074502 MODEL 10394539 ncrna LOC106150127 uncharacterized LOC106150127 NW_004955406 30305947 30325557 - 106150127 AGCD01006363;XR_001236749 MODEL 8799794 ncrna LOC102007160 uncharacterized LOC102007160 NW_004955443 4405793 4414236 + 102007160 AGCD01038213;GBDF01080321;XR_262175 MODEL 8859818 protein-coding Dnase1l2 deoxyribonuclease 1 like 2 INVOLVED IN corneocyte development (ortholog); DNA catabolic process (ortholog); hair follicle development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) NW_004955442 15028168 15031110 - 102027238 AGCD01037854;GBDI01174846;XM_005391441;XM_013517729 XP_005391498;XP_013373183 MODEL 8712557 protein-coding Tube1 tubulin epsilon 1 INVOLVED IN cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); FOUND IN centrosome (ortholog) NW_004955526 4484867 4519603 + 102008142 AGCD01069368;GBDF01193580;XM_005409771;XM_005409772;XR_264663 XP_005409828;XP_005409829 MODEL 9007606 protein-coding Hgf hepatocyte growth factor ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); cell morphogenesis (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; scatter factor/hepatocyte growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN extracellular space (ortholog) NW_004955410 4114280 4181953 + 102003521 AGCD01010660;AGCD01010661;GBDK01115500;XM_005377192;XM_005377193;XM_013510677;XM_013510678;XM_013510679;XM_013510680;XM_013510681 XP_005377249;XP_005377250;XP_013366131;XP_013366132;XP_013366133;XP_013366134;XP_013366135 MODEL 8893952 ncrna LOC102018193 uncharacterized LOC102018193 NW_004955492 8662680 8668236 + 102018193 AGCD01060823;GBCB01028339;XR_264060 MODEL 8737740 protein-coding Amd1 adenosylmethionine decarboxylase 1 ENCODES a protein that exhibits adenosylmethionine decarboxylase activity (ortholog); identical protein binding (ortholog); putrescine binding (ortholog); INVOLVED IN polyamine metabolic process (ortholog); S-adenosylmethionine metabolic process (ortholog); spermidine biosynthetic process (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog); Overweight (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955411 35541517 35563209 + 102025334 AGCD01012439;AGCD01012440;GBDI01060072;XM_005377893 XP_005377950 MODEL 10286414 ncrna LOC106147154 uncharacterized LOC106147154 NW_004955523 1100850 1112300 + 106147154 AGCD01068499;XR_001231923;XR_001231924 MODEL 8790365 protein-coding Hoxa5 homeobox A5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bronchiole development (ortholog); cartilage morphogenesis (ortholog); ASSOCIATED WITH Diaphragmatic Hernia (ortholog); head and neck squamous cell carcinoma (ortholog); Mouth Neoplasms (ortholog); FOUND IN nucleus (ortholog) NW_004955410 28835795 28838244 - 102003844 AGCD01011261;GBCB01024836;XM_005377451 XP_005377508 MODEL 8730163 pseudo LOC102010130 olfactory receptor 1361-like NW_004955408 1554851 1556907 + 102010130 AGCD01007965 MODEL 8773021 protein-coding Cbr4 carbonyl reductase 4 ENCODES a protein that exhibits 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); NAD(P)H dehydrogenase (quinone) activity (ortholog); NADPH binding (ortholog); INVOLVED IN daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); pancreatic cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxidoreductase complex (ortholog) NW_004955403 37201474 37226414 + 102007722 AGCD01002564;AGCD01002565;GBDF01005826;XM_005373573;XM_005373574 XP_005373630;XP_005373631 MODEL 8941477 protein-coding Tirap TIR domain containing adaptor protein ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Bacteremia (ortholog); Immunodeficiency 67 (ortholog); malaria (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) NW_004955412 27303548 27315031 + 102004684 AGCD01013233;GBCE01142482;XM_005378502 XP_005378559 MODEL 39132411 snrna U6 U6 spliceosomal RNA 8715723 pseudo LOC102020057 T-complex protein 1 subunit gamma pseudogene NW_004955442 5409499 5411146 + 102020057 AGCD01037559;XR_262116 MODEL 9035732 ncrna LOC102024238 uncharacterized LOC102024238 NW_004955420 25457014 25461027 - 102024238 AGCD01021358;AGCD01021359;GBDF01226054;XR_260755 MODEL 8704724 protein-coding Tsnaxip1 translin associated factor X interacting protein 1 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955484 8868022 8889089 - 102024010 AGCD01058398;AGCD01058399;AGCD01058400;GBDK01187927;XM_005403624;XM_005403625;XM_013503887;XM_013503888 XP_005403681;XP_005403682;XP_013359341;XP_013359342 MODEL 39133598 snrna U2 U2 spliceosomal RNA 8771059 protein-coding Agtrap angiotensin II receptor associated protein ENCODES a protein that exhibits angiotensin type II receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of blood pressure (ortholog); response to hypoxia (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; ASSOCIATED WITH acquired metabolic disease (ortholog); Cardiomegaly (ortholog); hypertension (ortholog); FOUND IN cell cortex (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955486 2137249 2149978 - 102007902 AGCD01058990;AGCD01058991;GBDK01194140;XM_005403993 XP_005404050 MODEL 8964549 protein-coding Ect2 epithelial cell transforming 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); activation of protein kinase activity (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog); centralspindlin complex (ortholog) NW_004955420 2769542 2827843 + 102003552 AGCD01020608;AGCD01020609;GBDF01158253;XM_005383013;XM_005383014;XM_013513629;XM_013513630;XM_013513631 XP_005383070;XP_005383071;XP_013369083;XP_013369084;XP_013369085 MODEL 155888854 protein-coding ATXN3L ataxin 3 like 8745693 protein-coding LOC102019761 tubulin gamma-1 chain NW_004955451 16487052 16494867 + 102019761 AGCD01043680;AGCD01043681;GBDJ01004622;XM_005394465 XP_005394522 MODEL 8870173 protein-coding Bcar1 BCAR1 scaffold protein, Cas family member ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); antigen receptor-mediated signaling pathway (ortholog); PARTICIPATES IN endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin-like growth factor signaling pathway; ASSOCIATED WITH breast cancer (ortholog); breast ductal carcinoma (ortholog); Ductal Carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955484 2223306 2258444 + 102022602 AGCD01058094;AGCD01058095;AGCD01058096;GBDF01288380;XM_005403450;XM_013503857;XM_013503858 XP_005403507;XP_013359311;XP_013359312 MODEL 8709544 protein-coding LOC102022557 serine protease 55 NW_004955403 52130187 52140797 + 102022557 AGCD01003002;AGCD01003003;GBDF01031608;XM_005373804 XP_005373861 MODEL 8747424 pseudo LOC102003613 centrosomal protein of 57 kDa pseudogene NW_004955403 17238602 17239548 - 102003613 AGCD01002072 MODEL 8753294 protein-coding Fastk Fas activated serine/threonine kinase ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); regulation of RNA splicing (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog) NW_004955491 5513482 5516681 - 102030203 AGCD01060485;GBBH01034082;GBDI01007297;XM_013504587 XP_013360041 MODEL 8926821 protein-coding LOC102015158 carcinoembryonic antigen-related cell adhesion molecule 21-like NW_004955555 376798 410353 + 102015158 AGCD01073026;AGCD01073027;AGCD01073028;AGCD01073029;GBCQ01010927;XM_013508672 XP_013364126 MODEL 8786929 protein-coding Ptpn21 protein tyrosine phosphatase non-receptor type 21 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); prostate cancer (ortholog) NW_004955438 11087906 11162592 - 102006283 AGCD01035224;AGCD01035225;AGCD01035226;AGCD01035227;GBDJ01312275;XM_005390257;XM_013517163;XM_013517164;XM_013517165;XM_013517166 XP_005390314;XP_013372617;XP_013372618;XP_013372619;XP_013372620 MODEL 39134411 misc_rna 7SK 7SK RNA 39133828 misc_rna 7SK 7SK RNA 8795510 protein-coding Arf3 ARF GTPase 3 INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital heart disease (ortholog); Developmental Disabilities (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955500 7756936 7761953 - 102010178 AGCD01063945;GBBH01032565;XM_013505647 XP_013361101 MODEL 8792407 protein-coding LOC102010135 potassium channel subfamily U member 1 NW_004955463 12558868 12692079 + 102010135 AGCD01049855;AGCD01049856;GBDF01257773;XM_005398473 XP_005398530 MODEL 8959674 protein-coding Wdtc1 WD and tetratricopeptide repeats 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); glucose metabolic process (ortholog); in utero embryonic development (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955452 6519628 6581333 + 102028819 AGCD01044114;AGCD01044115;AGCD01044116;AGCD01044117;GBDF01050605;XM_005394896;XM_005394898 XP_005394953;XP_005394955 MODEL 8844164 protein-coding LOC102017438 WD repeat-containing protein 87-like NW_004955468 1463879 1474333 + 102017438 AGCD01051769;GBDF01076818;XM_013522427 XP_013377881 MODEL 8926538 protein-coding Ggcx gamma-glutamyl carboxylase ENCODES a protein that exhibits gamma-glutamyl carboxylase activity (ortholog); vitamin binding (ortholog); INVOLVED IN lung growth (ortholog); negative regulation of bone development (ortholog); negative regulation of neurotransmitter secretion (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH blood coagulation disease (ortholog); Coagulation Protein Disorders (ortholog); combined deficiency of vitamin K-dependent clotting factors 1 (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 1926924 1952635 + 102029413 AGCD01024252;GBDK01013035;XM_005385426;XM_005385427 XP_005385483;XP_005385484 MODEL 39133503 snrna U4 U4 spliceosomal RNA 39132185 rrna 5S_rRNA 5S ribosomal RNA 10381721 ncrna LOC106150128 uncharacterized LOC106150128 NW_004955465 9790977 9794654 + 106150128 AGCD01050495;XR_001236753 MODEL 8823216 pseudo LOC102007161 zinc finger protein 451 pseudogene NW_004955444 72378 78511 + 102007161 AGCD01038648;AGCD01038649 MODEL 8742361 protein-coding Rgs2 regulator of G protein signaling 2 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); beta-tubulin binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); maternal process involved in female pregnancy (ortholog); negative regulation of cardiac muscle hypertrophy (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder disease (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955406 30261757 30265389 + 102018685 AGCD01006363;GBBH01140341;XM_005375101 XP_005375158 MODEL 8995011 protein-coding Adcy7 adenylate cyclase 7 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); diadenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); schizophrenia (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN membrane (ortholog) NW_004955433 8362957 8428773 + 102015882 AGCD01031591;AGCD01031592;AGCD01031593;GBDK01005020;XM_005388269;XM_013516211;XM_013516212;XM_013516213;XM_013516214;XM_013516215;XM_013516216 XP_005388326;XP_013371665;XP_013371666;XP_013371667;XP_013371668;XP_013371669;XP_013371670 MODEL 8761090 ncrna LOC102005347 uncharacterized LOC102005347 NW_004955411 1520955 1525362 + 102005347 AGCD01011485;GBDF01208789;XR_259910 MODEL 8911148 pseudo LOC102006101 serine incorporator 3-like NW_004955459 2481300 2493364 - 102006101 AGCD01047991 MODEL 8865984 ncrna LOC102021550 uncharacterized LOC102021550 NW_004955415 14023924 14024705 + 102021550 AGCD01016284;GBDF01000432;XR_260290 MODEL 8796837 protein-coding Bcar3 BCAR3 adaptor protein, NSP family member ENCODES a protein that exhibits kinase binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN endothelin receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); substance-related disorder (ortholog); FOUND IN focal adhesion (ortholog); membrane (ortholog) NW_004955423 991046 1105033 + 102012102 AGCD01023426;AGCD01023427;AGCD01023428;GBCQ01122548;GBDI01163711;XM_013514437 XP_013369891 MODEL 9019508 pseudo LOC102018199 cyclin-G1 pseudogene NW_004955425 7631390 7649613 + 102018199 AGCD01025391 MODEL 8827808 protein-coding Tubgcp2 tubulin gamma complex component 2 INVOLVED IN brain development (ortholog); neuron migration (ortholog); ASSOCIATED WITH pachygyria, microcephaly, developmental delay, and dysmorphic facies, with or without seizures (ortholog); FOUND IN centrosome (ortholog); microtubule organizing center (ortholog) NW_004955477 10909213 10932833 - 102003020 AGCD01055709;GBCE01076319;XM_005402058;XM_013503035;XM_013503036;XM_013503037;XM_013503038 XP_005402115;XP_013358489;XP_013358490;XP_013358491;XP_013358492 MODEL 10265514 ncrna LOC106147155 uncharacterized LOC106147155 NW_004955523 389441 393531 - 106147155 AGCD01068453;GBDI01278963;XR_001231925 MODEL 8969352 protein-coding Atf6b activating transcription factor 6 beta ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of ATF6-mediated unfolded protein response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to endoplasmic reticulum stress (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955437 582083 592026 - 102008979 AGCD01034149;AGCD01034150;GBCQ01065006;XM_005389410;XM_013516900 XP_005389467;XP_013372354 MODEL 39132412 snrna U6 U6 spliceosomal RNA 8871222 protein-coding Sgcb sarcoglycan beta INVOLVED IN cardiac muscle cell development (ortholog); gene expression (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2E (ortholog); cardiomyopathy (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) NW_004955447 18459562 18472367 + 102011377 AGCD01041174;AGCD01041175;GBDJ01180305;GBDK01317787;XM_013518513 XP_013373967 MODEL 8757427 ncrna LOC102012577 uncharacterized LOC102012577 NW_004955437 7996387 8008061 - 102012577 AGCD01034476;GBDF01158367;XR_261866 MODEL 8936663 protein-coding Chmp4b charged multivesicular body protein 4B ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); exit from mitosis (ortholog); ASSOCIATED WITH cataract 31 multiple types (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955422 27482239 27526798 - 102026226 AGCD01023323;AGCD01023324;AGCD01023325;AGCD01023326;GBCB01007585;GBDK01003467;XM_005384838 XP_005384895 MODEL 8968915 protein-coding Pea15 proliferation and apoptosis adaptor protein 15 INVOLVED IN negative regulation of D-glucose import across plasma membrane (ortholog); negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) NW_004955468 11981956 11991427 + 102015498 AGCD01052140;GBCE01004193;XM_005400198;XM_013522420 XP_005400255;XP_013377874 MODEL 8787493 protein-coding Bnip1 BCL2 interacting protein 1 ENCODES a protein that exhibits calcium-induced calcium release activity (ortholog); SNAP receptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic process in response to mitochondrial fragmentation (ortholog); endoplasmic reticulum membrane fusion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Down syndrome (ortholog); spondyloepiphyseal dysplasia congenita (ortholog); Spondylopeiphyseal dysplasia, Holling type (ortholog); FOUND IN COPI-coated vesicle (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955408 25774305 25788802 + 102029267 AGCD01008652;GBDF01126859;XM_005376349 XP_005376406 MODEL 8825298 trna Trnak-uuu transfer RNA lysine (anticodon UUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978826 AGCD01006660;AGCD01022734;AGCD01040255;AGCD01042735;AGCD01050592;AGCD01050596;AGCD01050635;AGCD01051475;AGCD01054570;AGCD01066489;AGCD01066490 MODEL 8926223 protein-coding Isca2 iron-sulfur cluster assembly 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); multiple mitochondrial dysfunctions syndrome (ortholog); FOUND IN mitochondrial [4Fe-4S] assembly complex (ortholog); mitochondrion (ortholog) NW_004955523 1008246 1010030 - 102012237 AGCD01068487;GBCC01018685;GBCQ01037786;XM_013507150 XP_013362604 MODEL 9042568 protein-coding Agxt alanine--glyoxylate and serine--pyruvate aminotransferase ENCODES a protein that exhibits alanine-glyoxylate transaminase activity (ortholog); amino acid binding (ortholog); identical protein binding (ortholog); INVOLVED IN glycine biosynthetic process, by transamination of glyoxylate (ortholog); glyoxylate catabolic process (ortholog); glyoxylate metabolic process (ortholog); PARTICIPATES IN alanine metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); genetic disease (ortholog); Hyperoxaluria (ortholog); FOUND IN mitochondrial matrix (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955542 710506 720564 - 102013449 AGCD01071475;GBDK01025977;XM_005411147 XP_005411204 MODEL 39134098 misc_rna 7SK 7SK RNA 8713648 protein-coding Plk1 polo like kinase 1 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); centrosome cycle (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); COVID-19 (ortholog); endometriosis (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955493 2206353 2217231 + 102023160 AGCD01060935;GBCQ01178810;XM_005405103 XP_005405160 MODEL 8999496 protein-coding LOC102010931 olfactory receptor 9G4-like NW_004955511 1803413 1804351 - 102010931 AGCD01066380;XM_005407978 XP_005408035 MODEL 8731730 protein-coding Flvcr2 FLVCR choline and putative heme transporter 2 ENCODES a protein that exhibits choline binding (ortholog); choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); choline transport (ortholog); endothelial tip cell fate specification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog); plasma membrane (ortholog) NW_004955612 46723 99012 + 102023420 AGCD01077180;GBDK01076389;XM_005414963;XM_005414964;XM_013510128;XM_013510129 XP_005415020;XP_005415021;XP_013365582;XP_013365583 MODEL 8911608 protein-coding LOC102022559 ATP-binding cassette sub-family G member 2-like NW_004955405 9444970 9614939 + 102022559 AGCD01004773;AGCD01004774;AGCD01004775;AGCD01004776;AGCD01004777;AGCD01004778;AGCD01004779;AGCD01004780;AGCD01004781;AGCD01004782;AGCD01004783;AGCD01004784;GBCQ01014385;XM_005374296;XM_005374297 XP_005374353;XP_005374354 MODEL 8937020 ncrna LOC102015162 uncharacterized LOC102015162 NW_004955583 527859 535777 - 102015162 AGCD01075834;GBDK01116207;XR_265095 MODEL 8874954 pseudo LOC102020058 olfactory receptor 4L1-like NW_004955550 282002 282930 - 102020058 AGCD01072492 MODEL 9018643 protein-coding Tjap1 tight junction associated protein 1 INVOLVED IN Golgi organization (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); Golgi apparatus (ortholog) NW_004955437 9314472 9337021 + 102008661 AGCD01034525;AGCD01034526;GBCE01098674;XM_005389769;XM_005389770;XM_005389773;XM_005389774;XM_005389776;XM_013516816;XM_013516818;XM_013516819 XP_005389826;XP_005389827;XP_005389830;XP_005389831;XP_005389833;XP_013372270;XP_013372272;XP_013372273 MODEL 8991424 pseudo LOC102005348 60S ribosomal protein L9-like NW_004955464 13057600 13058278 + 102005348 AGCD01050255 MODEL 8789735 protein-coding Cbs cystathionine beta-synthase ENCODES a protein that exhibits carbon monoxide binding (ortholog); cystathionine beta-synthase activity (ortholog); enzyme binding (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); blood vessel remodeling (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); PARTICIPATES IN cystathioninuria pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cardiovascular system disease (ortholog); cerebral infarction (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955407 38924355 38939790 + 102005896 AGCD01007815;GBDF01223345;XM_005375796;XM_005375797;XM_005375798;XM_005375799 XP_005375853;XP_005375854;XP_005375855;XP_005375856 MODEL 8861245 protein-coding Gpr137c G protein-coupled receptor 137C FOUND IN lysosomal membrane (ortholog) NW_004955409 10533840 10592130 - 102028062 AGCD01009475;AGCD01009476;AGCD01009477;GBCB01051838;GBCQ01114426;XM_013510458 XP_013365912 MODEL 39134412 misc_rna 7SK 7SK RNA 8752772 protein-coding Klc4 kinesin light chain 4 ASSOCIATED WITH NEURODEGENERATION, EARLY-CHILDHOOD-ONSET, WITH RETINITIS PIGMENTOSA, SENSORINEURAL HEARING LOSS, AND DEMYELINATING PERIPHERAL NEUROPATHY (ortholog) NW_004955437 9022873 9036026 + 102003280 AGCD01034513;AGCD01034514;GBBH01140327;XM_005389751;XM_005389752 XP_005389808;XP_005389809 MODEL 39133600 snrna U2 U2 spliceosomal RNA 39133830 misc_rna 7SK 7SK RNA 9024321 protein-coding Dnase1l3 deoxyribonuclease 1L3 ENCODES a protein that exhibits DNA binding (ortholog); DNA endonuclease activity (ortholog); endonuclease activity (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); DNA catabolic process (ortholog); neutrophil activation involved in immune response (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleus (ortholog) NW_004955430 7867172 7892079 - 102021584 AGCD01029374;AGCD01029375;GBDI01217979;XM_013515716;XM_013515717 XP_013371170;XP_013371171 MODEL 9035373 protein-coding Arf4 ARF GTPase 4 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); GTP binding (ortholog); NAD+-protein-arginine ADP-ribosyltransferase activity (ortholog); INVOLVED IN apical protein localization (ortholog); cell migration (ortholog); dendritic spine development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955430 7288386 7319449 - 102015431 AGCD01029342;AGCD01029343;AGCD01029344;AGCD01029345;AGCD01029346;AGCD01029347;AGCD01029348;GBBH01001002;GBCB01022960;XM_013515600 XP_013371054 MODEL 8900877 protein-coding Ect2l epithelial cell transforming 2 like NW_004955436 20754395 20843015 - 102015238 AGCD01034038;AGCD01034039;AGCD01034040;AGCD01034041;GBDF01223049;XM_013516618;XM_013516619;XM_013516620;XM_013516621;XM_013516622;XM_013516623;XM_013516624;XM_013516625;XM_013516626;XM_013516627;XM_013516629;XR_001234967 XP_013372072;XP_013372073;XP_013372074;XP_013372075;XP_013372076;XP_013372077;XP_013372078;XP_013372079;XP_013372080;XP_013372081;XP_013372083 MODEL 8955859 pseudo LOC102017441 coiled-coil domain-containing protein 34 pseudogene NW_004955469 11016154 11018584 + 102017441 AGCD01052553 MODEL 8753807 protein-coding Wee1 WEE1 G2 checkpoint kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN establishment of cell polarity (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955414 25281725 25299242 + 102030298 AGCD01015590;AGCD01015591;GBDF01053736;GBDI01132275;XM_005380269 XP_005380326 MODEL 9032028 protein-coding Ggh gamma-glutamyl hydrolase ENCODES a protein that exhibits gamma-glutamyl-peptidase activity (ortholog); INVOLVED IN response to ethanol (ortholog); response to insulin (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955444 15901225 15930358 + 102025402 AGCD01039158;GBDF01126172;XM_005392173 XP_005392230 MODEL 39132186 rrna 5S_rRNA 5S ribosomal RNA 39131611 rrna 5S_rRNA 5S ribosomal RNA 8845380 protein-coding Fastkd1 FAST kinase domains 1 INVOLVED IN mitochondrial RNA metabolic process (ortholog); regulation of mitochondrial mRNA stability (ortholog); ASSOCIATED WITH Glaucoma 1, Open Angle, B (ortholog); FOUND IN mitochondrion (ortholog) NW_004955449 4974131 5018426 + 102027920 AGCD01041903;AGCD01041904;AGCD01041905;AGCD01041906;GBDJ01388705;XM_005393257;XM_005393258;XM_005393259;XM_005393260;XM_013518733;XM_013518734 XP_005393314;XP_005393315;XP_005393316;XP_005393317;XP_013374187;XP_013374188 MODEL 8941536 ncrna LOC102006108 uncharacterized LOC102006108 NW_004955411 31891671 31897535 - 102006108 AGCD01012289;GBDK01379399;XR_001232822;XR_001232823 MODEL 8849411 protein-coding Tspan1 tetraspanin 1 INVOLVED IN protein stabilization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); congenital muscular dystrophy (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955464 12089589 12095000 - 102024321 AGCD01050180;GBBH01003796;XM_005398688 XP_005398745 MODEL 8742517 protein-coding LOC102024243 olfactory receptor 2F1-like NW_004955491 318142 319272 + 102024243 AGCD01060329;GBDF01212144;XM_005404880 XP_005404937 MODEL 8990868 protein-coding Tubgcp3 tubulin gamma complex component 3 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955404 969027 1027229 + 102013372 AGCD01003215;AGCD01003216;AGCD01003217;GBDF01189724;XM_005373977;XM_005373978;XM_005373979;XM_013515700 XP_005374034;XP_005374035;XP_005374036;XP_013371154 MODEL 8717837 ncrna LOC102010136 uncharacterized LOC102010136 NW_004955411 9963098 9981570 - 102010136 AGCD01011768;GBDF01305717;XR_259928 MODEL 8948879 protein-coding LOC102019762 zinc finger protein 596-like NW_004955403 53350577 53361660 + 102019762 AGCD01003053;XM_013514941 XP_013370395 MODEL 8870546 protein-coding Atxn7 ataxin 7 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); negative regulation of insulin-like growth factor receptor signaling pathway (ortholog); negative regulation of microtubule depolymerization (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955517 1897050 1980428 - 102018429 AGCD01067611;GBBH01188275;GBCB01002790;XM_013506935 XP_013362389 MODEL 9055526 ncrna LOC102005350 uncharacterized LOC102005350 NW_004955465 6890152 6891671 + 102005350 AGCD01050449;GBCB01123633;XR_263244 MODEL 9061329 ncrna LOC102003614 uncharacterized LOC102003614 NW_004955404 19125609 19150116 - 102003614 AGCD01003639;GBDK01198293;XR_259318 MODEL 8789554 protein-coding Amdhd1 amidohydrolase domain containing 1 PARTICIPATES IN histidine metabolic pathway; histidinemia pathway NW_004955405 32281726 32308230 + 102028714 AGCD01005331;AGCD01005332;AGCD01005333;GBDF01200165;XM_005374693 XP_005374750 MODEL 39133504 snrna U4 U4 spliceosomal RNA 8745953 protein-coding Tram2 translocation associated membrane protein 2 INVOLVED IN collagen biosynthetic process (ortholog); protein insertion into ER membrane (ortholog) NW_004955411 5598612 5620685 + 102028508 AGCD01011652;AGCD01011653;AGCD01011654;GBBH01091491;XM_005377655 XP_005377712 MODEL 9018476 trna Trnal-aag transfer RNA leucine (anticodon AAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955493;NW_004955465;NW_004955550;NW_004955550 931996;13766471;1486047;1410172 932077;13766552;1486128;1410253 +;-;-;+ 101978790 AGCD01050622;AGCD01060872;AGCD01072566;AGCD01072577 MODEL 10329527 ncrna LOC106150129 uncharacterized LOC106150129 NW_004955465 12602957 12617239 + 106150129 AGCD01050550;AGCD01050551;GBCQ01183964;XR_001236754 MODEL 8922241 protein-coding Ptpn22 protein tyrosine phosphatase non-receptor type 22 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN cellular response to muramyl dipeptide (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH Addison's disease (ortholog); alopecia areata (ortholog); Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); nucleus (ortholog) NW_004955435 17082762 17139067 - 102014165 AGCD01033345;GBDK01393931;XM_005388984 XP_005389041 MODEL 8748119 protein-coding Hoxa6 homeobox A6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955410 28839924 28844328 - 102003522 AGCD01011261;GBCB01024856;XM_005377450 XP_005377507 MODEL 8866233 protein-coding Rgs20 regulator of G protein signaling 20 INVOLVED IN response to amphetamine (ortholog); FOUND IN cytoplasm (ortholog); trans-Golgi network (ortholog) NW_004955454 13271409 13305730 + 102005338 AGCD01045432;GBDK01335709;XM_005396066 XP_005396123 MODEL 8736592 protein-coding Arf5 ARF GTPase 5 INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955479 8644658 8647697 + 102022285 AGCD01056451;GBDJ01003261;XM_005402360 XP_005402417 MODEL 8707331 protein-coding Bcas1 brain enriched myelin associated protein 1 INVOLVED IN myelination (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); synapse (ortholog) NW_004955445 4951645 5049925 + 102015058 AGCD01039434;AGCD01039435;AGCD01039436;AGCD01039437;GBDJ01021202;XM_005392286;XM_013518334;XM_013518335 XP_005392343;XP_013373788;XP_013373789 MODEL 8748513 protein-coding Chmp4c charged multivesicular body protein 4C ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); late endosome to lysosome transport (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); Flemming body (ortholog) NW_004955417 96674 135601 + 102025003 AGCD01017786;AGCD01017787;GBBH01047695;XM_005381721 XP_005381778 MODEL 9016463 protein-coding Hgfac HGF activator ASSOCIATED WITH Crohn's disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); rough endoplasmic reticulum (ortholog) NW_004955514 2155924 2161302 + 102003898 AGCD01067074;GBBH01041775;XM_005408761;XM_005408762 XP_005408818;XP_005408819 MODEL 8990272 protein-coding Peak1 pseudopodium enriched atypical kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cell migration (ortholog); focal adhesion assembly (ortholog); protein autophosphorylation (ortholog); FOUND IN actin cytoskeleton (ortholog); focal adhesion (ortholog) NW_004955450 2000823 2285023 - 102021066 AGCD01042375;AGCD01042376;AGCD01042377;AGCD01042378;AGCD01042379;AGCD01042380;AGCD01042381;GBDK01237637;XM_005393484;XM_005393487;XM_005393488;XM_013518878;XM_013518879;XM_013518880;XM_013518881;XM_013518882 XP_005393541;XP_005393544;XP_005393545;XP_013374332;XP_013374333;XP_013374334;XP_013374335;XP_013374336 MODEL 8971238 protein-coding Klf1 KLF transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to endothelin (ortholog); chromatin remodeling (ortholog); embryonic hemopoiesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); chromosome 5q deletion syndrome (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 31939994 31943539 - 102024559 AGCD01016703;GBDI01044226;XM_005381037;XM_013512240 XP_005381094;XP_013367694 MODEL 8877928 protein-coding Bnip2 BCL2 interacting protein 2 INVOLVED IN blastocyst development (ortholog); centrosome cycle (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 15157411 15180069 + 102011383 AGCD01042782;AGCD01042783;GBDF01002691;XM_005393826;XM_005393827 XP_005393883;XP_005393884 MODEL 8857212 protein-coding Iscu iron-sulfur cluster assembly enzyme ENCODES a protein that exhibits ferrous iron binding (ortholog); iron-sulfur cluster chaperone activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); genetic disease (ortholog); myopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial [2Fe-2S] assembly complex (ortholog) NW_004955455 9833924 9840547 + 102025085 AGCD01045931;GBCE01000206;XM_005396465 XP_005396522 MODEL 9031877 pseudo LOC102018200 60S ribosomal protein L9-like NW_004955501 4266517 4318674 - 102018200 AGCD01064120;AGCD01064121;AGCD01064122;AGCD01064123;AGCD01064124 MODEL 8760506 protein-coding Adcy8 adenylate cyclase 8 ENCODES a protein that exhibits actin binding (ortholog); adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN activation of protein kinase A activity (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH diabetic angiopathy (ortholog); Hyperkinesis (ortholog); mood disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955461 5497708 5725574 - 102009359 AGCD01048884;AGCD01048885;GBDF01296763;XM_005398002;XM_005398003;XM_005398004 XP_005398059;XP_005398060;XP_005398061 MODEL 9032650 protein-coding LOC102022569 neural Wiskott-Aldrich syndrome protein-like NW_004955457 15824734 15826663 + 102022569 AGCD01047099;GBCQ01093605;XM_005397108 XP_005397165 MODEL 39133341 snrna U4 U4 spliceosomal RNA 10224400 ncrna LOC106147156 uncharacterized LOC106147156 NW_004955523 441502 444200 - 106147156 AGCD01068457;GBDI01249007;XR_001231926 MODEL 8845212 protein-coding Amdhd2 amidohydrolase domain containing 2 ENCODES a protein that exhibits N-acetylgalactosamine-6-phosphate deacetylase activity (ortholog); N-acetylglucosamine-6-phosphate deacetylase activity (ortholog); INVOLVED IN negative regulation of UDP-N-acetylglucosamine biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway NW_004955442 14775528 14791650 - 102021805 AGCD01037839;GBDK01061652;XM_013517941;XM_013517942;XM_013517943;XM_013517944 XP_013373395;XP_013373396;XP_013373397;XP_013373398 MODEL 9017189 protein-coding Flywch1 FLYWCH-type zinc finger 1 ENCODES a protein that exhibits transcription coactivator binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Silver-Russell syndrome (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); pericentric heterochromatin (ortholog) NW_004955442 14392901 14419178 - 102012692 AGCD01037815;AGCD01037816;GBDJ01238933;XM_005391393;XM_005391394;XM_013517968;XM_013517969;XM_013517970;XM_013517971;XM_013517972;XM_013517973;XM_013517974;XM_013517975;XM_013517976 XP_005391450;XP_005391451;XP_013373422;XP_013373423;XP_013373424;XP_013373425;XP_013373426;XP_013373427;XP_013373428;XP_013373429;XP_013373430 MODEL 39131612 rrna 5S_rRNA 5S ribosomal RNA 8962580 protein-coding Plk2 polo like kinase 2 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); ATPase binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); long-term synaptic depression (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromatin (ortholog) NW_004955446 9671090 9676956 + 102008994 AGCD01040162;GBDF01005861;XM_005392671 XP_005392728 MODEL 8714770 protein-coding Ggn gametogenetin ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN double-strand break repair (ortholog); embryo implantation (ortholog); gamete generation (ortholog); ASSOCIATED WITH spermatogenic failure 69 (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955468 1039531 1044513 + 102015708 AGCD01051748;AGCD01051749;GBDF01007916;XM_013522470 XP_013377924 MODEL 39132413 snrna U6 U6 spliceosomal RNA 8861575 pseudo LOC102012580 SPRY domain-containing protein 4 pseudogene NW_004955538 3531985 3536331 - 102012580 AGCD01071169 MODEL 8881813 pseudo LOC102006110 brain mitochondrial carrier protein 1 pseudogene NW_004955411 25443595 25445484 + 102006110 AGCD01012158 MODEL 9035341 protein-coding Gpr139 G protein-coupled receptor 139 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); identical protein binding (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog) NW_004955442 3698546 3737281 - 102012477 AGCD01037515;XM_005391121 XP_005391178 MODEL 8771812 protein-coding Tjp1 tight junction protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); connexin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); adherens junction maintenance (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); bile duct cancer (ortholog); brain disease (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) NW_004955416 28640807 28869717 + 102012321 AGCD01017634;AGCD01017635;AGCD01017636;AGCD01017637;AGCD01017638;GBDF01053729;XM_005381650;XM_005381653;XM_005381654;XM_005381656;XM_005381657 XP_005381707;XP_005381710;XP_005381711;XP_005381713;XP_005381714 MODEL 39133552 snrna U2 U2 spliceosomal RNA 8766865 protein-coding Cbx1 chromobox 1 ENCODES a protein that exhibits enzyme binding (ortholog); histone H1K26me1 reader activity (ortholog); histone H1K26me2 reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome, centromeric region (ortholog) NW_004955451 13066628 13083693 + 102009450 AGCD01043445;AGCD01043446;GBDF01128155;XM_005394249 XP_005394306 MODEL 8763603 protein-coding Sgcd sarcoglycan delta INVOLVED IN calcium ion homeostasis (ortholog); calcium-mediated signaling (ortholog); cardiac muscle cell contraction (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2F (ortholog); cardiomyopathy (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) NW_004955408 10273344 10820108 + 102010673 AGCD01008265;AGCD01008266;AGCD01008267;AGCD01008268;AGCD01008269;AGCD01008270;AGCD01008271;AGCD01008272;AGCD01008273;AGCD01008274;GBCE01162943;XM_005376219;XM_013508746 XP_005376276;XP_013364200 MODEL 8746835 pseudo LOC102007162 protein Red-like NW_004955565 2044877 2054593 - 102007162 AGCD01074340 MODEL 9060919 protein-coding Rgs21 regulator of G protein signaling 21 INVOLVED IN sensory perception of bitter taste (ortholog); sensory perception of sweet taste (ortholog); sensory perception of umami taste (ortholog) NW_004955406 29778745 29800009 + 102016886 AGCD01006341;AGCD01006342;XM_005375097 XP_005375154 MODEL 39133832 misc_rna 7SK 7SK RNA 8925384 protein-coding Tubgcp4 tubulin gamma complex component 4 ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); microcephaly and chorioretinopathy 1 (ortholog); FOUND IN centrosome (ortholog); recycling endosome (ortholog) NW_004955416 9933695 9962635 + 102006575 AGCD01017100;GBDF01127538;XM_005381385;XM_005381387 XP_005381442;XP_005381444 MODEL 8855176 protein-coding Agxt2 alanine--glyoxylate aminotransferase 2 ENCODES a protein that exhibits (R)-3-amino-2-methylpropionate-pyruvate transaminase activity (ortholog); alanine-glyoxylate transaminase activity (ortholog); beta-alanine:pyruvate transaminase activity (ortholog); INVOLVED IN glycine biosynthetic process, by transamination of glyoxylate (ortholog); glyoxylate catabolic process (ortholog); N(omega),N(omega)-dimethyl-L-arginine catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Beta-Aminoisobutyric Acid, Urinary Excretion of (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955426 20102368 20142596 - 102006482 AGCD01026563;GBCQ01063829;XM_005386191 XP_005386248 MODEL 39134099 misc_rna 7SK 7SK RNA 8724001 pseudo LOC102010932 olfactory receptor 10AG1-like NW_004955511 901202 903998 - 102010932 AGCD01066346 MODEL 9058885 protein-coding Dnase2 deoxyribonuclease 2, lysosomal ENCODES a protein that exhibits deoxyribonuclease II activity (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); ASSOCIATED WITH AUTOINFLAMMATORY-PANCYTOPENIA SYNDROME (ortholog); systemic lupus erythematosus (ortholog); FOUND IN lysosome (ortholog) NW_004955415 31936588 31939540 - 102024221 AGCD01016703;GBDK01197161;XM_005381036 XP_005381093 MODEL 8808908 ncrna LOC102005351 uncharacterized LOC102005351 NW_004955466 1620912 1640471 + 102005351 AGCD01050714;GBDI01342166;XR_001236819;XR_001236820;XR_263277 MODEL 8916256 protein-coding Eda ectodysplasin A ENCODES a protein that exhibits cytokine activity (ortholog); death receptor agonist activity (ortholog); death receptor binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); cytokine-mediated signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH anodontia (ortholog); Clouston syndrome (ortholog); craniofrontonasal syndrome (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955475 9177911 9592150 + 102017331 AGCD01055059;AGCD01055060;AGCD01055061;AGCD01055062;AGCD01055063;AGCD01055064;AGCD01055065;AGCD01055066;AGCD01055067;AGCD01055068;GBBH01162077;XM_005401598;XM_005401599;XM_005401600;XM_005401601;XM_005401602 XP_005401655;XP_005401656;XP_005401657;XP_005401658;XP_005401659 MODEL 39132187 rrna 5S_rRNA 5S ribosomal RNA 8780142 protein-coding LOC102017444 olfactory receptor 51I2-like NW_004955414 20249559 20250521 - 102017444 AGCD01015365;XM_005380054 XP_005380111 MODEL 8853652 protein-coding Wee2 WEE2 oocyte meiosis inhibiting kinase INVOLVED IN female meiotic nuclear division (ortholog); female pronucleus assembly (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH Oocyte Maturation Defect 5 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955494 1836909 1869384 - 102015022 AGCD01061424;GBDJ01283231;XM_013505022 XP_013360476 MODEL 8795922 protein-coding Hgh1 HGH1 cochaperone NW_004955454 2788014 2790902 + 102026289 AGCD01045035;GBBH01149832;XM_005395858 XP_005395915 MODEL 8712764 pseudo LOC102015165 prostaglandin E synthase 3-like NW_004955450 17741936 17745554 - 102015165 AGCD01042884 MODEL 8702681 protein-coding Atf7 activating transcription factor 7 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN heart development (ortholog); hematopoietic progenitor cell differentiation (ortholog); hepatocyte apoptotic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955458 803738 898847 - 102023878 AGCD01047154;AGCD01047155;AGCD01047156;GBCB01056445;XM_005397189;XM_005397190 XP_005397246;XP_005397247 MODEL 8935316 protein-coding Fastkd2 FAST kinase domains 2 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); mitochondrial RNA modification (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 44 (ortholog); cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955457 8191861 8213003 - 102014215 AGCD01046906;GBCB01041996;XM_013520749;XM_013520750 XP_013376203;XP_013376204 MODEL 39134413 misc_rna 7SK 7SK RNA 9060971 ncrna LOC102020059 uncharacterized LOC102020059 NW_004955442 10191797 10207230 - 102020059 AGCD01037700;GBCB01061306;XR_262130 MODEL 8983601 protein-coding Hoxa7 homeobox A7 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 28848029 28851069 - 102003003 AGCD01011261;AGCD01011262;GBCB01024844;XM_005377448;XM_005377449 XP_005377505;XP_005377506 MODEL 8791816 ncrna LOC102010145 uncharacterized LOC102010145 NW_004955414 6341018 6344268 - 102010145 AGCD01014918;GBDK01371346;XR_001233178;XR_260156 MODEL 9017251 pseudo LOC102019765 zinc finger protein Aiolos pseudogene NW_004955404 14412796 14424219 + 102019765 AGCD01003509 MODEL 8760901 protein-coding Arf6 ARF GTPase 6 ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); endocytic recycling (ortholog); PARTICIPATES IN E-cadherin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN cell cortex (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955409 12814814 12818142 - 102026724 AGCD01009567;GBCE01001245;GBDF01002353;XM_005376832 XP_005376889 MODEL 8868070 protein-coding Bcas2 BCAS2 pre-mRNA processing factor INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); dendrite development (ortholog); dendrite morphogenesis (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH breast cancer (ortholog); diffuse large B-cell lymphoma (ortholog); FOUND IN DNA replication factor A complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955435 17830532 17857360 - 102018761 AGCD01033373;AGCD01033374;AGCD01033375;GBCB01023597;XM_005389000;XM_013516556 XP_005389057;XP_013372010 MODEL 9044095 pseudo LOC102021551 protein FAM156A/FAM156B-like NW_004955475 2559027 2559617 - 102021551 AGCD01054812 MODEL 9037186 protein-coding Atxn7l1 ataxin 7 like 1 NW_004955410 10167196 10391362 - 102023446 AGCD01010793;AGCD01010794;GBDK01168953;XM_005377250;XM_005377251;XM_005377252;XM_005377253;XM_005377254;XM_005377255;XM_005377256;XM_005377257;XM_005377258;XM_005377259;XM_005377260;XM_005377261;XM_005377262;XM_013510529;XM_013510530;XM_013510531;XM_013510532;XM_013510533;XR_001232727 XP_005377307;XP_005377308;XP_005377309;XP_005377310;XP_005377311;XP_005377312;XP_005377313;XP_005377314;XP_005377315;XP_005377316;XP_005377317;XP_005377318;XP_005377319;XP_013365983;XP_013365984;XP_013365985;XP_013365986;XP_013365987 MODEL 8790989 trna Trnal-caa transfer RNA leucine (anticodon CAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465;NW_004955418;NW_004955465;NW_004955465 13283889;29926451;13908819;13888432 13283993;29926556;13908923;13888537 -;+;+;- 101978789 AGCD01019491;AGCD01050597;AGCD01050633;AGCD01050634 MODEL 8956128 protein-coding Cbx2 chromobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN development of primary sexual characteristics (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,Xy Gonadal Dysgenesis, Complete, Sry-Related (ortholog); 46,XY sex reversal 5 (ortholog); FOUND IN euchromatin (ortholog); heterochromatin (ortholog); nucleoplasm (ortholog) NW_004955506 3045395 3053003 - 102024485 AGCD01065307;GBCE01130199;GBDK01415620;XM_013506142 XP_013361596 MODEL 8731175 protein-coding Bnip3 BCL2 interacting protein 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN autophagic cell death (ortholog); brown fat cell differentiation (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Chronic Intermittent Hypoxia (ortholog); chronic obstructive pulmonary disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955477 9621812 9630406 - 102022813 AGCD01055677;GBCQ01005103;GBDI01001865;XM_005402035 XP_005402092 MODEL 8898264 protein-coding Ptpn23 protein tyrosine phosphatase non-receptor type 23 ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER AND STRUCTURAL BRAIN ANOMALIES WITH OR WITHOUT SEIZURES AND SPASTICITY (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 24869737 24897196 - 102014365 AGCD01021337;AGCD01021338;GBDF01119078;XM_005383401 XP_005383458 MODEL 8850631 protein-coding Isg15 ISG15 ubiquitin like modifier ENCODES a protein that exhibits integrin binding (ortholog); protein tag activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); defense response to virus (ortholog); innate immune response (ortholog); ASSOCIATED WITH Carcinogenesis (ortholog); Chronic Hepatitis C (ortholog); COVID-19 (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 9706878 9707876 - 102006919 AGCD01059196;GBDF01017087;XM_005404270 XP_005404327 MODEL 9040298 protein-coding Ahctf1 AT-hook containing transcription factor 1 INVOLVED IN nuclear pore complex assembly (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); strabismus (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); kinetochore (ortholog) NW_004955406 9687237 9754426 - 102012156 AGCD01005831;AGCD01005832;AGCD01005833;AGCD01005834;GBDF01053229;XM_005374795;XM_013520457;XM_013520466 XP_005374852;XP_013375911;XP_013375920 MODEL 8770578 ncrna LOC102021557 uncharacterized LOC102021557 NW_004955482 5627591 5629868 - 102021557 AGCD01057343;XR_263833 MODEL 9038816 protein-coding Dnase2b deoxyribonuclease 2 beta ENCODES a protein that exhibits deoxyribonuclease II activity (ortholog); DNA endonuclease activity (ortholog); ASSOCIATED WITH cataract (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955423 9467245 9481223 - 102003353 AGCD01023660;GBDF01064486;XM_005385161 XP_005385218 MODEL 8845470 protein-coding Tspan10 tetraspanin 10 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog) NW_004955506 1442378 1448726 - 102003161 AGCD01065263;AGCD01065264;GBCE01121011;XM_005407269;XM_005407270 XP_005407326;XP_005407327 MODEL 8927324 protein-coding Amelx amelogenin X-linked ENCODES a protein that exhibits calcium ion binding (ortholog); growth factor activity (ortholog); hydroxyapatite binding (ortholog); INVOLVED IN amelogenesis (ortholog); cell adhesion (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1E (ortholog); autosomal dominant hypocalcemia (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endocytic vesicle (ortholog) NW_004955544 1974889 1979063 - 102009545 AGCD01071732;XM_005411402 XP_005411459 MODEL 8775130 protein-coding LOC102012581 uncharacterized LOC102012581 NW_004955437 3361650 3366877 + 102012581 AGCD01034309;GBDF01223138;XM_013516728 XP_013372182 MODEL 39131358 protein-coding CHMP5 charged multivesicular body protein 5 39133553 snrna U2 U2 spliceosomal RNA 9063625 protein-coding LOC102007164 zinc finger protein 709-like NW_004955569 1445074 1480352 + 102007164 AGCD01074655;AGCD01074656;GBDF01080557;XM_013509372;XM_013509373 XP_013364826;XP_013364827 MODEL 8856953 protein-coding Sgce sarcoglycan epsilon INVOLVED IN kidney development (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH genetic disease (ortholog); myoclonic dystonia (ortholog); myoclonic dystonia 11 (ortholog); FOUND IN dendrite membrane (ortholog); dystrophin-associated glycoprotein complex (ortholog); Golgi apparatus (ortholog) NW_004955432 11310488 11383803 - 102013326 AGCD01030945;AGCD01030946;AGCD01030947;GBDI01385644;XM_005388045;XM_005388047;XM_005388048;XM_005388049;XM_013516087;XM_013516088;XM_013516089 XP_005388102;XP_005388104;XP_005388105;XP_005388106;XP_013371541;XP_013371542;XP_013371543 MODEL 8899959 protein-coding Bcas3 BCAS3 microtubule associated cell migration factor ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); cellular response to estrogen stimulus (ortholog); positive regulation of catalytic activity (ortholog); ASSOCIATED WITH breast cancer (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cell leading edge (ortholog); cell periphery (ortholog); cytoplasm (ortholog) NW_004955451 1929857 2450225 + 102009134 AGCD01042999;AGCD01043000;AGCD01043001;AGCD01043002;AGCD01043003;AGCD01043004;AGCD01043005;AGCD01043006;AGCD01043007;AGCD01043008;AGCD01043009;GBBH01077707;GBDJ01275049;XM_013519304 XP_013374758 MODEL 8791428 protein-coding LOC102022571 low affinity immunoglobulin gamma Fc region receptor III-like NW_004955462 14728809 14740340 - 102022571 AGCD01049456;GBBH01117101;XM_005398310;XM_013521433;XM_013521434 XP_005398367;XP_013376887;XP_013376888 MODEL 10064437 ncrna LOC106147158 uncharacterized LOC106147158 NW_004955523 203543 211843 + 106147158 AGCD01068437;GBBH01115508;XR_001231941 MODEL 9017316 ncrna LOC102024251 uncharacterized LOC102024251 NW_004955423 17070325 17072112 - 102024251 AGCD01023845;GBDF01112738;XR_001234037;XR_260979 MODEL 39131613 rrna 5S_rRNA 5S ribosomal RNA 8870085 protein-coding Fmc1 formation of mitochondrial complex V assembly factor 1 INVOLVED IN apoptotic mitochondrial changes (ortholog); dopaminergic neuron differentiation (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH Parkinson's Disease, Mitochondrial (ortholog); secondary Parkinson disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955494 3722359 3730217 - 102028308 AGCD01061481;GBDJ01007860;XM_005405445;XM_013504962;XM_013504963;XM_013504965 XP_005405502;XP_013360416;XP_013360417;XP_013360419 MODEL 8755462 protein-coding Plk3 polo like kinase 3 ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); COVID-19 (ortholog); ovary epithelial cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955464 13419562 13424104 - 102006642 AGCD01050275;GBBH01135021;GBCE01163140;XM_013521627;XM_013521628 XP_013377081;XP_013377082 MODEL 8895153 protein-coding Ggnbp2 gametogenetin binding protein 2 INVOLVED IN cell differentiation (ortholog); labyrinthine layer blood vessel development (ortholog); labyrinthine layer development (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 1345720 1386100 - 102030588 AGCD01042967;GBBH01142717;XM_005393944;XM_005393946;XM_005393947;XM_005393949;XM_013519328;XM_013519329 XP_005394001;XP_005394003;XP_005394004;XP_005394006;XP_013374782;XP_013374783 MODEL 8931909 protein-coding Isg20 interferon stimulated exonuclease gene 20 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); exonuclease activity (ortholog); single-stranded DNA 3'-5' DNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA catabolic process (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955416 16305534 16321596 - 102007008 AGCD01017352;GBDK01383095;XM_005381569;XM_005381570 XP_005381626;XP_005381627 MODEL 9043618 ncrna LOC102003615 uncharacterized LOC102003615 NW_004955405 22571094 22618074 - 102003615 AGCD01005096;AGCD01005097;GBDF01187374;XR_001235464;XR_001235465 MODEL 8880101 protein-coding Hgs hepatocyte growth factor-regulated tyrosine kinase substrate ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); ubiquitin-like protein ligase binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); membrane invagination (ortholog); negative regulation of angiogenesis (ortholog); PARTICIPATES IN autophagy pathway; vascular endothelial growth factor signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955506 1405543 1418095 - 102029313 AGCD01065262;GBCB01044465;XM_005407264;XM_005407265 XP_005407321;XP_005407322 MODEL 8924479 protein-coding LOC102006112 olfactory receptor 147-like NW_004955412 25143673 25144628 - 102006112 AGCD01013136;XM_005378416 XP_005378473 MODEL 9024960 protein-coding Peak3 PEAK family member 3 INVOLVED IN regulation of actin cytoskeleton organization (ortholog); regulation of cell shape (ortholog) NW_004955495 5866204 5869808 + 102013844 AGCD01062038;AGCD01062039;GBBH01110872;GBDK01304804;XM_013505238 XP_013360692 MODEL 8809700 protein-coding Tspan12 tetraspanin 12 ENCODES a protein that exhibits Wnt receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); maintenance of blood-brain barrier (ortholog); Norrin signaling pathway (ortholog); ASSOCIATED WITH Disease Susceptibility (ortholog); exudative vitreoretinopathy (ortholog); exudative vitreoretinopathy 5 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955479 2570937 2636884 - 102005930 AGCD01056276;AGCD01056277;GBCB01074924;GBCE01134144;XM_013503288 XP_013358742 MODEL 8967308 protein-coding Hoxa9 homeobox A9 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); definitive hemopoiesis (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 28856661 28861803 - 102006990 AGCD01011262;GBCQ01070723;XM_005377462 XP_005377519 MODEL 8962504 protein-coding Tjp2 tight junction protein 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein tyrosine kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); homotypic cell-cell adhesion (ortholog); intestinal absorption (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant nonsyndromic deafness 51 (ortholog); branchiootorenal syndrome (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955434 3781368 3923240 - 102005497 AGCD01032143;AGCD01032144;AGCD01032145;AGCD01032146;AGCD01032147;AGCD01032148;GBCE01075388;GBDJ01089898;XM_005388570;XM_013516340 XP_005388627;XP_013371794 MODEL 39133834 misc_rna 7SK 7SK RNA 8810076 protein-coding Klf10 KLF transcription factor 10 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to endothelin (ortholog); cellular response to starvation (ortholog); FOUND IN nucleus (ortholog) NW_004955417 27165146 27168604 - 102019170 AGCD01018535;GBCB01026324;GBCB01038374;XM_005381943 XP_005382000 MODEL 39134100 misc_rna 7SK 7SK RNA 9031301 pseudo LOC102018201 heat shock factor-binding protein 1 pseudogene NW_004955426 14759883 14760171 + 102018201 AGCD01026402;XM_005386144 MODEL 39131322 protein-coding TUBGCP5 tubulin gamma complex component 5 10258658 protein-coding LOC106150130 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase NW_004955465 3740444 3791391 - 106150130 AGCD01050389;AGCD01050390;AGCD01050391;AGCD01050392;GBDI01010900;XM_013521854;XM_013521855 XP_013377308;XP_013377309 MODEL 8964911 pseudo LOC102010935 histone-binding protein RBBP4 pseudogene NW_004955515 5132224 5133419 - 102010935 AGCD01067339 MODEL 9002739 protein-coding Atxn7l2 ataxin 7 like 2 NW_004955435 12904829 12913351 + 102029551 AGCD01033174;GBBH01066741;GBDF01254358;XM_005388863;XM_013516428;XM_013516430;XM_013516431 XP_005388920;XP_013371882;XP_013371884;XP_013371885 MODEL 8987674 protein-coding Eda2r ectodysplasin A2 receptor ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia 1 (ortholog); tooth agenesis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955475 6080153 6143339 - 102011535 AGCD01054950;AGCD01054951;AGCD01054952;GBDK01000096;XM_005401579;XM_013502891;XM_013502892;XM_013502894 XP_005401636;XP_013358345;XP_013358346;XP_013358348 MODEL 9006513 pseudo LOC102017447 mitochondrial import inner membrane translocase subunit TIM14 pseudogene NW_004955472 3409907 3410297 - 102017447 AGCD01053510 MODEL 39132415 snrna U6 U6 spliceosomal RNA 8929494 ncrna LOC102015166 uncharacterized LOC102015166 NW_004955403 14039207 14134842 - 102015166 AGCD01002018;GBDF01075806;XR_259172;XR_259173 MODEL 9019222 trna Trnal-cag transfer RNA leucine (anticodon CAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955433;NW_004955433;NW_004955462 363663;14941261;14940923;14719898 363745;14941343;14941005;14719980 -;-;+;+ 101978793 AGCD01031735;AGCD01049456;AGCD01057606 MODEL 8729820 ncrna LOC102021559 uncharacterized LOC102021559 NW_004955484 6885587 6902049 + 102021559 AGCD01058297;GBDF01041123;XR_263891;XR_263892 MODEL 8782351 protein-coding Dnd1 DND microRNA-mediated repression inhibitor 1 ENCODES a protein that exhibits miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); germ cell development (ortholog); negative regulation of miRNA-mediated gene silencing (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); teratocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955418 30795 33394 + 102025792 AGCD01018663;AGCD01018664;GBBH01229689;GBDF01087689;XM_013513000 XP_013368454 MODEL 8786525 protein-coding Fastkd3 FAST kinase domains 3 INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); positive regulation of mitochondrial translation (ortholog); regulation of mitochondrial mRNA stability (ortholog); FOUND IN mitochondrion (ortholog) NW_004955504 5401956 5412216 - 102018204 AGCD01064898;GBCE01163023;XM_005407074;XM_005407075;XM_005407076;XM_013505894 XP_005407131;XP_005407132;XP_005407133;XP_013361348 MODEL 8791634 protein-coding Trank1 tetratricopeptide repeat and ankyrin repeat containing 1 ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog) NW_004955421 3707510 3852886 - 102029868 AGCD01021665;AGCD01021666;AGCD01021667;AGCD01021668;AGCD01021669;AGCD01021670;AGCD01021671;GBDK01237538;XM_005383682;XM_013513764;XM_013513765;XM_013513766 XP_005383739;XP_013369218;XP_013369219;XP_013369220 MODEL 8881247 protein-coding LOC102010146 uncharacterized LOC102010146 NW_004955471 567077 785143 + 102010146 AGCD01052962;AGCD01052963;AGCD01052964;AGCD01052965;XM_013522863 XP_013378317 MODEL 9058378 protein-coding Amer1 APC membrane recruitment protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); beta-catenin destruction complex binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); kidney development (ortholog); ASSOCIATED WITH cleft palate (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN nuclear body (ortholog); plasma membrane (ortholog) NW_004955475 4451094 4470750 + 102004699 AGCD01054880;GBDI01368674;XM_005401556;XM_005401557;XM_005401558;XM_005401559;XM_005401560;XM_013502871 XP_005401613;XP_005401614;XP_005401615;XP_005401616;XP_005401617;XP_013358325 MODEL 8816960 protein-coding Ggps1 geranylgeranyl diphosphate synthase 1 ENCODES a protein that exhibits (2E,6E)-farnesyl diphosphate synthase activity (ortholog); geranylgeranyl diphosphate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN geranylgeranyl diphosphate biosynthetic process (ortholog); isoprenoid metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH MUSCULAR DYSTROPHY, CONGENITAL HEARING LOSS, AND OVARIAN INSUFFICIENCY SYNDROME (ortholog); neuromuscular disease (ortholog); sensorineural hearing loss (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955492 4582998 4593194 - 102025018 AGCD01060726;GBDI01135083;XM_005404953;XM_013504680;XM_013504682 XP_005405010;XP_013360134;XP_013360136 MODEL 8757349 protein-coding Isg20l2 interferon stimulated exonuclease gene 20 like 2 NW_004955545 2797370 2804142 - 102008263 AGCD01071923;GBDF01006917;XM_005411698 XP_005411755 MODEL 39133342 snrna U4 U4 spliceosomal RNA 9059166 protein-coding LOC102005354 T-cell surface glycoprotein YE1/48-like NW_004955413 7520787 7531148 + 102005354 AGCD01013822;GBDK01356301;XM_005378928 XP_005378985 MODEL 8764475 protein-coding Chmp6 charged multivesicular body protein 6 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); late endosome to lysosome transport (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); endosome membrane (ortholog) NW_004955506 1987710 1994731 - 102016177 AGCD01065286;AGCD01065287;GBCB01022811;XM_005407316 XP_005407373 MODEL 8755597 protein-coding Sgcg sarcoglycan gamma INVOLVED IN gene expression (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2C (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); FOUND IN dystroglycan complex (ortholog); plasma membrane (ortholog); sarcoglycan complex (ortholog) NW_004955497 3592041 3702780 + 102013189 AGCD01062549;AGCD01062550;AGCD01062551;AGCD01062552;GBCB01003278;GBDI01356297;XM_005406371 XP_005406428 MODEL 8853190 protein-coding Cbx3 chromobox 3 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); histone H1K26me1 reader activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); DNA damage response (ortholog); gene expression (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); prostate cancer (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome, centromeric region (ortholog) NW_004955410 28042627 28052616 + 102028168 AGCD01011228;AGCD01011229;GBDF01046149;XM_005377442;XM_005377443 XP_005377499;XP_005377500 MODEL 8785512 protein-coding Bnip3l BCL2 interacting protein 3 like ENCODES a protein that exhibits identical protein binding (ortholog); lamin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); defense response to virus (ortholog); mitochondrial protein catabolic process (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Cerebral Hemorrhage (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955403 49122408 49144162 + 102027479 AGCD01002935;GBDF01047886;XM_005373726 XP_005373783 MODEL 8821435 protein-coding Ptpn3 protein tyrosine phosphatase non-receptor type 3 ENCODES a protein that exhibits ATPase binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN liver regeneration (ortholog); negative regulation of membrane protein ectodomain proteolysis (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955419 17560664 17645420 + 102018833 AGCD01020159;GBBH01026019;GBCQ01067663;XM_013513248 XP_013368702 MODEL 8734457 ncrna LOC102020062 uncharacterized LOC102020062 NW_004955445 610193 668437 + 102020062 AGCD01039320;AGCD01039321;AGCD01039322;GBDF01153612;XR_262284;XR_262285 MODEL 8837124 protein-coding Ahcy adenosylhomocysteinase ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); adenyl nucleotide binding (ortholog); copper ion binding (ortholog); INVOLVED IN chronic inflammatory response to antigenic stimulus (ortholog); circadian sleep/wake cycle (ortholog); modified amino acid catabolic process (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocysteine metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); amino acid metabolic disorder (ortholog); Animal Disease Models (ortholog); FOUND IN cytosol (ortholog) NW_004955422 26992295 27013100 + 102024352 AGCD01023310;AGCD01023311;GBBH01000893;XM_005384832 XP_005384889 MODEL 8713044 protein-coding Bcas4 breast carcinoma amplified sequence 4 NW_004955445 7542545 7603896 - 102026052 AGCD01039544;AGCD01039545;AGCD01039546;GBCE01013075;GBDI01222160;XM_013518344;XM_013518345;XM_013518346 XP_013373798;XP_013373799;XP_013373800 MODEL 8898401 protein-coding LOC102019776 interferon-inducible GTPase 1-like NW_004955408 5863062 5868671 + 102019776 AGCD01008158;GBDJ01218355;XM_005376159 XP_005376216 MODEL 9033409 protein-coding Atf7ip activating transcription factor 7 interacting protein ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); transcription coregulator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); Testicular Neoplasms (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 11117369 11261787 + 102023996 AGCD01013952;AGCD01013953;AGCD01013954;AGCD01013955;AGCD01013956;GBCE01146003;XM_005378989;XM_005378990;XM_013511437;XM_013511438;XM_013511439;XM_013511440 XP_005379046;XP_005379047;XP_013366891;XP_013366892;XP_013366893;XP_013366894 MODEL 8804578 protein-coding LOC102022572 indolethylamine N-methyltransferase NW_004955410 31925147 31930528 + 102022572 AGCD01011334;GBCE01074653;XM_005377506 XP_005377563 MODEL 8877264 protein-coding Rgs22 regulator of G protein signaling 22 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955417 15284368 15381984 - 102014356 AGCD01018227;AGCD01018228;AGCD01018229;AGCD01018230;AGCD01018231;GBBH01116898;XM_013512826 XP_013368280 MODEL 8957371 protein-coding Arfgap1 ARF GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); nervous system disease (ortholog); FOUND IN Golgi membrane (ortholog); postsynaptic density (ortholog); synapse (ortholog) NW_004955528 878837 893427 - 102016415 AGCD01069547;GBBH01164590;XM_005409986;XM_005409988;XM_013507465;XM_013507466;XM_013507467;XM_013507468;XM_013507469;XM_013507470;XM_013507471;XM_013507472;XM_013507473;XM_013507474 XP_005410043;XP_005410045;XP_013362919;XP_013362920;XP_013362921;XP_013362922;XP_013362923;XP_013362924;XP_013362925;XP_013362926;XP_013362927;XP_013362928 MODEL 8864018 protein-coding LOC102012583 putative alpha-1-antitrypsin-related protein NW_004955438 14225509 14229594 + 102012583 AGCD01035332;XM_005390440 XP_005390497 MODEL 9067337 protein-coding LOC102006113 beta-galactosidase-1-like protein 3 NW_004955412 35224061 35251279 + 102006113 AGCD01013407;GBDF01102556;XM_013510984 XP_013366438 MODEL 8718576 protein-coding Amer2 APC membrane recruitment protein 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955497 4640343 4645314 - 102014466 AGCD01062583;AGCD01062584;GBDF01074697;XM_013505515 XP_013360969 MODEL 8982899 protein-coding Tjp3 tight junction protein 3 INVOLVED IN regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) NW_004955495 5620817 5647211 + 102007672 AGCD01062015;AGCD01062016;AGCD01062017;GBBH01087934;XM_005405882;XM_005405883;XM_013505215 XP_005405939;XP_005405940;XP_013360669 MODEL 8797676 protein-coding Pear1 platelet endothelial aggregation receptor 1 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); platelet aggregation (ortholog); positive regulation of platelet activation (ortholog); FOUND IN lamellipodium (ortholog); phagocytic cup (ortholog); plasma membrane (ortholog) NW_004955545 2958334 2977146 + 102014178 AGCD01071930;GBDI01177513;XM_005411722;XM_013508217;XM_013508218;XM_013508219;XM_013508220;XM_013508221;XM_013508222;XM_013508223 XP_005411779;XP_013363671;XP_013363672;XP_013363673;XP_013363674;XP_013363675;XP_013363676;XP_013363677 MODEL 39134414 misc_rna 7SK 7SK RNA 8984391 ncrna LOC102005357 uncharacterized LOC102005357 NW_004955413 23947369 23962983 + 102005357 AGCD01014341;AGCD01014342;AGCD01014343;GBCQ01160344;XR_260102 MODEL 8943907 protein-coding Gpr142 G protein-coupled receptor 142 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog) NW_004955553 1256086 1278280 + 102003810 AGCD01072873;AGCD01072874;AGCD01072875;AGCD01072876;GBDI01220829;GBDJ01312032;XM_013508639 XP_013364093 MODEL 8856259 protein-coding LOC102017451 zinc finger protein 490-like NW_004955415 33173538 33184014 + 102017451 AGCD01016754;AGCD01016755;GBCE01101349;GBDI01153439;XM_005381149 XP_005381206 MODEL 8881448 protein-coding Chmp7 charged multivesicular body protein 7 INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); exit from mitosis (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); chromatin (ortholog) NW_004955403 46467463 46478897 + 102017294 AGCD01002859;AGCD01002860;GBDF01152869;XM_005373696 XP_005373753 MODEL 8986534 protein-coding LOC102021560 olfactory receptor 1N2-like NW_004955419 5190554 5191489 - 102021560 AGCD01019788;XM_013513101 XP_013368555 MODEL 8887806 protein-coding LOC102003616 spidroin-1-like NW_004955405 39280354 39282100 - 102003616 AGCD01005498;XM_013519522 XP_013374976 MODEL 8837390 protein-coding Plk4 polo like kinase 4 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN centriole replication (ortholog); cilium assembly (ortholog); de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); colon cancer (ortholog); diabetic retinopathy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); deuterosome (ortholog) NW_004955428 13548485 13566786 - 102005492 AGCD01027958;AGCD01027959;GBDF01044579;XM_005386739 XP_005386796 MODEL 39132190 rrna 5S_rRNA 5S ribosomal RNA 8742476 protein-coding Tspan13 tetraspanin 13 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN regulation of calcium ion transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 19971216 19979923 + 102021637 AGCD01011039;GBBH01095569;XM_013510494 XP_013365948 MODEL 39133836 misc_rna 7SK 7SK RNA 9047660 protein-coding Wfdc1 WAP four-disulfide core domain 1 INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of wound healing (ortholog); ASSOCIATED WITH COVID-19 (ortholog); melanoma (ortholog); prostate cancer (ortholog); FOUND IN extracellular space (ortholog) NW_004955564 22536 38091 - 102017517 AGCD01074187;GBDK01412209;XM_005413214;XM_005413215;XM_013509194;XM_013509195 XP_005413271;XP_005413272;XP_013364648;XP_013364649 MODEL 8964676 protein-coding Adcy9 adenylate cyclase 9 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955442 13310289 13433816 + 102007474 AGCD01037770;AGCD01037771;AGCD01037772;AGCD01037773;AGCD01037774;GBCB01024399;XM_013517879;XM_013517880 XP_013373333;XP_013373334 MODEL 8817638 protein-coding Bcat1 branched chain amino acid transaminase 1 ENCODES a protein that exhibits branched-chain-amino-acid transaminase activity (ortholog); identical protein binding (ortholog); L-isoleucine-2-oxoglutarate transaminase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Brain Injuries (ortholog); cholestasis (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955413 19975395 20087656 - 102028072 AGCD01014204;AGCD01014205;AGCD01014206;AGCD01014207;AGCD01014208;GBDF01118828;XM_005379094;XM_013511614 XP_005379151;XP_013367068 MODEL 39134101 misc_rna 7SK 7SK RNA 8927099 protein-coding Klf11 KLF transcription factor 11 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to endothelin (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Hepatomegaly (ortholog); Insulin Resistance (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955487 5448869 5454322 + 102026433 AGCD01059333;GBDF01053930;GBDK01432660;XM_013504377 XP_013359831 MODEL 8897146 protein-coding Atf7ip2 activating transcription factor 7 interacting protein 2 NW_004955442 7896626 7975579 - 102010202 AGCD01037629;AGCD01037630;AGCD01037631;AGCD01037632;AGCD01037633;AGCD01037634;GBDJ01075670;XM_005391191;XM_005391192;XM_005391193;XM_005391194;XM_005391195;XM_013518012;XM_013518013 XP_005391248;XP_005391249;XP_005391250;XP_005391251;XP_005391252;XP_013373466;XP_013373467 MODEL 8888677 protein-coding LOC102003619 tubulin alpha chain-like NW_004955406 36709889 36828026 + 102003619 AGCD01006562;AGCD01006563;AGCD01006564;AGCD01006565;AGCD01006566;AGCD01006567;GBCQ01012688;XM_005375474 XP_005375531 MODEL 10215756 ncrna LOC106150131 uncharacterized LOC106150131 NW_004955465 13887825 13890392 + 106150131 AGCD01050633;GBDF01144915;XR_001236755 MODEL 9049939 protein-coding LOC102018205 carbonyl reductase [NADPH] 2 NW_004955506 1131548 1133857 + 102018205 AGCD01065246;GBDF01237291;XM_005407225 XP_005407282 MODEL 39131614 rrna 5S_rRNA 5S ribosomal RNA 10152498 protein-coding LOC106147159 cartilage oligomeric matrix protein-like NW_004955524 2877761 2878420 + 106147159 AGCD01068842;GBBH01184703;XM_013507184 XP_013362638 MODEL 8937825 protein-coding LOC102024255 melanoma-associated antigen 8-like NW_004955498 3964985 3967659 - 102024255 AGCD01062955;GBDF01220827;XM_005406404 XP_005406461 MODEL 8876176 protein-coding Ggt1 gamma-glutamyltransferase 1 ENCODES a protein that exhibits aminoacyltransferase activity (ortholog); glutathione gamma-glutamate hydrolase (ortholog); leukotriene-C(4) hydrolase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); cellular response to oxidative stress (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH aflatoxins-related hepatocellular carcinoma (ortholog); Albuminuria (ortholog); alcohol dependence (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955455 8082578 8099523 + 102004455 AGCD01045873;GBCQ01011883;XM_005396394 XP_005396451 MODEL 39132416 snrna U6 U6 spliceosomal RNA 8811959 protein-coding Edar ectodysplasin A receptor ENCODES a protein that exhibits signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia (ortholog); ectodermal dysplasia 10A (ortholog); FOUND IN apical part of cell (ortholog); plasma membrane (ortholog) NW_004955470 12310680 12362555 - 102011109 AGCD01052926;AGCD01052927;GBDI01338416;XM_005400813 XP_005400870 MODEL 8775835 protein-coding LOC102015168 potassium channel subfamily U member 1-like NW_004956264 3132 5744 - 102015168 AGCD01079346;XM_005415186 XP_005415243 MODEL 9021527 protein-coding Cbx4 chromobox 4 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); histone H3K27me3 reader activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955506 2998241 3002788 + 102024145 AGCD01065306;GBCE01104488;GBDK01359474;XM_013506139 XP_013361593 MODEL 39133555 snrna U2 U2 spliceosomal RNA 8839711 protein-coding LOC102007165 arylacetamide deacetylase-like NW_004955448 3194027 3221003 - 102007165 AGCD01041312;AGCD01041313;GBCC01001426;XM_005393039 XP_005393096 MODEL 9025267 protein-coding Ahcyl1 adenosylhomocysteinase like 1 ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); enzyme regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); apoptotic process (ortholog); epithelial fluid transport (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955435 13487441 13525924 + 102013206 AGCD01033203;GBDF01120093;XM_005388904;XM_013516542 XP_005388961;XP_013371996 MODEL 8964101 protein-coding Dner delta/notch like EGF repeat containing ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN central nervous system development (ortholog); glial cell differentiation (ortholog); Notch receptor processing (ortholog); PARTICIPATES IN Notch signaling pathway; FOUND IN dendrite (ortholog); early endosome (ortholog); neuronal cell body (ortholog) NW_004955453 5307256 5615550 + 102009013 AGCD01044707;AGCD01044708;AGCD01044709;AGCD01044710;GBCE01105053;XM_013519994 XP_013375448 MODEL 8791335 protein-coding Trap1 TNF receptor associated protein 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN negative regulation of cellular respiration (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide (ortholog); translational attenuation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); osteoarthritis (ortholog); Stomach Neoplasms (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) NW_004955442 13697471 13733161 + 102019206 AGCD01037786;GBDF01051870;XM_005391321;XM_005391323;XM_013517803 XP_005391378;XP_005391380;XP_013373257 MODEL 8986116 pseudo LOC102010940 T-complex protein 1 subunit zeta-like NW_004955523 256492 260604 - 102010940 AGCD01068440 MODEL 8839133 protein-coding Rgs3 regulator of G protein signaling 3 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH bladder disease (ortholog); Experimental Liver Cirrhosis (ortholog); lesion of sciatic nerve (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) NW_004955419 13918274 14042090 - 102019811 AGCD01020009;GBBH01229198;XM_005382663;XM_005382665;XM_005382666;XM_005382668;XM_005382669;XM_005382670;XM_005382672;XM_005382673;XM_013513122;XM_013513124 XP_005382720;XP_005382722;XP_005382723;XP_005382725;XP_005382726;XP_005382727;XP_005382729;XP_005382730;XP_013368576;XP_013368578 MODEL 39133343 snrna U4 U4 spliceosomal RNA 8800511 protein-coding Atxn7l3 ataxin 7 like 3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN DUBm complex (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955451 17280659 17286140 - 102010659 AGCD01043735;GBDJ01004931;GBDK01417543;XM_005394524;XM_013519365;XM_013519366;XM_013519367;XM_013519368 XP_005394581;XP_013374819;XP_013374820;XP_013374821;XP_013374822 MODEL 8942737 protein-coding Fmn1 formin 1 ENCODES a protein that exhibits microtubule binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); forelimb morphogenesis (ortholog); gene expression (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955416 1365797 1774025 + 102026105 AGCD01016834;AGCD01016835;AGCD01016836;AGCD01016837;AGCD01016838;AGCD01016839;AGCD01016840;GBDF01084814;XM_005381169;XM_005381170;XM_005381171;XM_005381172;XM_005381173;XM_013512614 XP_005381226;XP_005381227;XP_005381228;XP_005381229;XP_005381230;XP_013368068 MODEL 9045764 protein-coding Hgsnat heparan-alpha-glucosaminide N-acetyltransferase ENCODES a protein that exhibits acyltransferase activity (ortholog); heparan-alpha-glucosaminide N-acetyltransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan catabolic process (ortholog); lysosomal transport (ortholog); protein complex oligomerization (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN lysosomal lumen (ortholog); lysosomal membrane (ortholog) NW_004955457 13351963 13386521 + 102004677 AGCD01047043;AGCD01047044;GBBH01006574;GBDI01255499;XM_013520761 XP_013376215 MODEL 8772367 protein-coding LOC102020064 neutrophil gelatinase-associated lipocalin-like NW_004955570 264285 270706 + 102020064 AGCD01074718;AGCD01074719;GBDF01000047;XM_005413522;XM_005413523 XP_005413579;XP_005413580 MODEL 9049578 protein-coding Hoxb1 homeobox B1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12707560 12708950 + 102007396 AGCD01043422;XM_005394243 XP_005394300 MODEL 8999719 protein-coding LOC102019780 uncharacterized LOC102019780 NW_004955409 8008074 8010374 - 102019780 AGCD01009374;XM_005376728 XP_005376785 MODEL 8892160 protein-coding LOC102010149 olfactory receptor 52K2-like NW_004955414 21881188 21882150 - 102010149 AGCD01015436;XM_013511736 XP_013367190 MODEL 8992652 protein-coding Gpr143 G protein-coupled receptor 143 ENCODES a protein that exhibits dopamine binding (ortholog); G protein-coupled receptor activity (ortholog); L-DOPA binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); melanosome localization (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Albinism (ortholog); congenital nystagmus 6 (ortholog); Foveal Hypoplasia (ortholog); FOUND IN apical plasma membrane (ortholog); Golgi apparatus (ortholog); lysosomal membrane (ortholog) NW_004955499 7900276 7953847 - 102019618 AGCD01063607;AGCD01063608;AGCD01063609;AGCD01063610;GBDF01099668;XM_005406546;XM_013505609;XM_013505610;XM_013505613;XM_013505614;XM_013505615;XM_013505616 XP_005406603;XP_013361063;XP_013361064;XP_013361067;XP_013361068;XP_013361069;XP_013361070 MODEL 8733522 protein-coding Ggt5 gamma-glutamyltransferase 5 ENCODES a protein that exhibits glutathione gamma-glutamate hydrolase (ortholog); leukotriene-C(4) hydrolase activity (ortholog); peptidyltransferase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); fatty acid metabolic process (ortholog); glutathione catabolic process (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955455 8101251 8125597 + 102006313 AGCD01045873;GBCE01076579;XM_005396402;XM_005396403;XM_005396404;XM_005396405 XP_005396459;XP_005396460;XP_005396461;XP_005396462 MODEL 8765735 pseudo LOC102012585 cytochrome c oxidase protein 20 homolog pseudogene NW_004955441 6084988 6089834 + 102012585 AGCD01036899;XM_005391041 MODEL 8817392 protein-coding Tubgcp6 tubulin gamma complex component 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule nucleation (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN centrosome (ortholog); gamma-tubulin ring complex (ortholog) NW_004955413 33252418 33272593 - 102014658 AGCD01014660;AGCD01014661;GBCB01089216;XM_005379671 XP_005379728 MODEL 8782493 protein-coding Plk5 polo like kinase 5 (inactive) ENCODES a protein that exhibits kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); defense response to tumor cell (ortholog); DNA damage response (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) NW_004955495 6415172 6424445 - 102028985 AGCD01062081;GBDJ01030988;XM_005405960;XM_013505279;XM_013505280;XM_013505281;XM_013505282;XM_013505283;XM_013505284;XM_013505285;XM_013505286;XM_013505287;XM_013505288;XM_013505289;XM_013505290 XP_005406017;XP_013360733;XP_013360734;XP_013360735;XP_013360736;XP_013360737;XP_013360738;XP_013360739;XP_013360740;XP_013360741;XP_013360742;XP_013360743;XP_013360744 MODEL 8939194 protein-coding Isl1 ISL LIM homeobox 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN atrial septum morphogenesis (ortholog); axon regeneration (ortholog); cardiac cell fate determination (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); atrial heart septal defect (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955446 15824956 15835000 - 102027796 AGCD01040309;GBBH01214419;XM_005392728 XP_005392785 MODEL 8718744 protein-coding Adcyap1 adenylate cyclase activating polypeptide 1 ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); peptide hormone receptor binding (ortholog); pituitary adenylate cyclase activating polypeptide activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); behavioral fear response (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alcohol dependence (ortholog); Brain Injuries (ortholog); FOUND IN extracellular space (ortholog); neuronal dense core vesicle lumen (ortholog); terminal bouton (ortholog) NW_004955402 9091927 9099803 - 102021292 AGCD01000205;XM_005372667;XM_005372668 XP_005372724;XP_005372725 MODEL 15036851 trna Trnal-gag transfer RNA leucine (anticodon GAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978791 8805716 protein-coding Tk1 thymidine kinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); thymidine kinase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN digestive tract development (ortholog); DNA synthesis involved in mitotic DNA replication (ortholog); fetal process involved in parturition (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH Animal Disease Models (ortholog); breast cancer (ortholog); cervix carcinoma (ortholog) NW_004955506 4379830 4390729 + 102008876 AGCD01065337;GBDK01117779;XM_005407382;XM_005407383 XP_005407439;XP_005407440 MODEL 8900294 protein-coding Pebp1 phosphatidylethanolamine binding protein 1 ENCODES a protein that exhibits ATP binding (ortholog); enzyme binding (ortholog); kinase binding (ortholog); INVOLVED IN eating behavior (ortholog); hippocampus development (ortholog); MAPK cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN apical part of cell (ortholog); axon terminus (ortholog); cell surface (ortholog) NW_004955455 13217012 13222370 - 102019570 AGCD01046060;GBBH01000809;GBCQ01004424;XM_013520338 XP_013375792 MODEL 8972611 pseudo LOC102018206 protein slowmo homolog 2 pseudogene NW_004955428 4184563 4185357 + 102018206 AGCD01027669 MODEL 8837526 protein-coding Sgcz sarcoglycan zeta ASSOCIATED WITH amphetamine abuse (ortholog); skin disease (ortholog); FOUND IN plasma membrane (ortholog); sarcoglycan complex (ortholog) NW_004955463 2114115 3127633 + 102013394 AGCD01049539;AGCD01049540;AGCD01049541;AGCD01049542;AGCD01049543;AGCD01049544;AGCD01049545;AGCD01049546;AGCD01049547;AGCD01049548;AGCD01049549;AGCD01049550;AGCD01049551;AGCD01049552;AGCD01049553;AGCD01049554;AGCD01049555;AGCD01049556;AGCD01049557;AGCD01049558;AGCD01049559;AGCD01049560;AGCD01049561;AGCD01049562;AGCD01049563;AGCD01049564;AGCD01049565;AGCD01049566;AGCD01049567;AGCD01049568;AGCD01049569;AGCD01049570;AGCD01049571;AGCD01049572;AGCD01049573;AGCD01049574;AGCD01049575;AGCD01049576;AGCD01049577;GBDF01041307;XM_005398345 XP_005398402 MODEL 9012459 protein-coding Bnip5 BCL2 interacting protein 5 ASSOCIATED WITH prostate cancer (ortholog) NW_004955437 4049113 4067150 - 102009216 AGCD01034359;GBCQ01139589;XM_005389589;XM_005389590;XM_005389591 XP_005389646;XP_005389647;XP_005389648 MODEL 39134415 misc_rna 7SK 7SK RNA 8751852 ncrna LOC102017452 uncharacterized LOC102017452 NW_004955477 7292845 7296633 - 102017452 AGCD01055613;GBDF01076495;XR_263662 MODEL 39131615 rrna 5S_rRNA 5S ribosomal RNA 8937174 pseudo LOC102022573 centrosomal protein of 57 kDa-like NW_004955410 22742948 22744516 + 102022573 AGCD01011082 MODEL 8803636 pseudo LOC102015173 caspase-3-like NW_004955452 3820476 3826409 - 102015173 AGCD01043948;AGCD01043949 MODEL 8928726 protein-coding Edaradd EDAR associated via death domain INVOLVED IN hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH ectodermal dysplasia (ortholog); ectodermal dysplasia 10A (ortholog); ectodermal dysplasia 10B (ortholog) NW_004955492 3709819 3777506 - 102019182 AGCD01060699;AGCD01060700;AGCD01060701;GBDI01249623;XM_005404937;XM_005404939;XM_005404940;XM_013504737 XP_005404994;XP_005404996;XP_005404997;XP_013360191 MODEL 8866852 protein-coding Arfgap2 ARF GTPase activating protein 2 ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955422 995672 1006008 + 102029755 AGCD01022444;GBDF01047823;XM_005384002;XM_005384003 XP_005384059;XP_005384060 MODEL 39133557 snrna U2 U2 spliceosomal RNA 39133838 misc_rna 7SK 7SK RNA 8727981 protein-coding Tspan14 tetraspanin 14 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); tetraspanin-enriched microdomain (ortholog) NW_004955510 463548 490635 + 102028319 AGCD01066149;AGCD01066150;GBDJ01088086;XM_005407874 XP_005407931 MODEL 39131316 protein-coding WFDC1 WAP four-disulfide core domain 1 39134102 misc_rna 7SK 7SK RNA 39133370 snrna U4 U4 spliceosomal RNA 10267307 ncrna LOC106150132 uncharacterized LOC106150132 NW_004955465 11268986 11272735 - 106150132 AGCD01050522;XR_001236756 MODEL 8982203 protein-coding LOC102003620 keratin-associated protein 14-like NW_004955407 29792800 29793709 - 102003620 AGCD01007615;XM_005375631 XP_005375688 MODEL 39133346 snrna U4 U4 spliceosomal RNA 8826588 protein-coding Rgs4 regulator of G protein signaling 4 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN dorsal root ganglion development (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); negative regulation of dopamine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; calcium signaling pathway via the calcium-sensing receptor; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH alcohol dependence (ortholog); bladder disease (ortholog); Drug-Induced Dyskinesia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955462 13340812 13347598 - 102009474 AGCD01049425;GBCQ01144636;XM_005398260;XM_005398261 XP_005398317;XP_005398318 MODEL 9021534 protein-coding LOC102024257 olfactory receptor 10AD1-like NW_004955500 7121240 7122420 - 102024257 AGCD01063901;XM_013505634 XP_013361088 MODEL 9020570 protein-coding LOC102005359 olfactory receptor 10J1-like NW_004955468 11069935 11070873 - 102005359 AGCD01052113;XM_005400167 XP_005400224 MODEL 8752625 protein-coding Fastkd5 FAST kinase domains 5 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN mitochondrial RNA processing (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog); ribonucleoprotein granule (ortholog) NW_004955415 14052009 14063208 - 102021875 AGCD01016284;XM_005380775 XP_005380832 MODEL 8834882 protein-coding Ptpn4 protein tyrosine phosphatase non-receptor type 4 ENCODES a protein that exhibits glutamate receptor binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); INVOLVED IN peptidyl-tyrosine phosphorylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); membrane (ortholog) NW_004955459 9803421 9981392 - 102020217 AGCD01048171;AGCD01048172;AGCD01048173;AGCD01048174;AGCD01048175;AGCD01048176;AGCD01048177;GBDI01108232;XM_005397664;XM_013521057;XM_013521058;XM_013521059 XP_005397721;XP_013376511;XP_013376512;XP_013376513 MODEL 8713631 protein-coding Tspan15 tetraspanin 15 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); tetraspanin-enriched microdomain (ortholog) NW_004955437 21643018 21687355 - 102022633 AGCD01034919;GBDI01066539;XM_005390084;XM_013517075;XM_013517076 XP_005390141;XP_013372529;XP_013372530 MODEL 8909410 protein-coding Chn1 chimerin 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); motor neuron axon guidance (ortholog); regulation of axonogenesis (ortholog); ASSOCIATED WITH autosomal dominant Robinow syndrome 2 (ortholog); Duane retraction syndrome (ortholog); Duane retraction syndrome 2 (ortholog) NW_004955449 574407 635566 + 102003921 AGCD01041770;AGCD01041771;AY533210;XM_005393180;XM_013518798;XM_013518799 AAS59413;XP_005393237;XP_013374252;XP_013374253 MODEL 8729827 pseudo LOC102021561 elongation factor 1-beta pseudogene NW_004955420 8719850 8724682 - 102021561 AGCD01020731 MODEL 39132192 rrna 5S_rRNA 5S ribosomal RNA 8888683 protein-coding Cbx5 chromobox 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromosome condensation (ortholog); DNA damage response (ortholog); heterochromatin formation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN chromocenter (ortholog); chromosome, telomeric region (ortholog); heterochromatin (ortholog) NW_004955458 1486951 1529649 - 102004043 AGCD01047184;AGCD01047185;AGCD01047186;AGCD01047187;AGCD01047188;GBDF01009957;XM_005397212;XM_005397213;XM_005397215;XM_013520945 XP_005397269;XP_005397270;XP_005397272;XP_013376399 MODEL 8842976 ncrna LOC102007168 uncharacterized LOC102007168 NW_004955592 171448 185769 + 102007168 AGCD01076300;AGCD01076301;GBDK01432229;XR_265130 MODEL 8781899 protein-coding Hoxb13 homeobox B13 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); epithelial cell maturation involved in prostate gland development (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); ductal carcinoma in situ (ortholog); FOUND IN nucleoplasm (ortholog); transcription regulator complex (ortholog) NW_004955451 12536415 12538169 + 102003717 AGCD01043401;XM_005394233 XP_005394290 MODEL 8873255 protein-coding Dnhd1 dynein heavy chain domain 1 INVOLVED IN flagellated sperm motility (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH essential tremor (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN sperm annulus (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955414 22230887 22300804 + 102024785 AGCD01015449;AGCD01015450;AGCD01015451;AGCD01015452;GBDK01413156;XM_005380153;XM_005380154;XM_005380155;XM_005380156;XM_005380157;XM_005380158;XM_005380160;XM_005380161;XM_005380162;XM_013511984;XM_013511985;XM_013511986;XM_013511987;XM_013511988;XM_013511989 XP_005380210;XP_005380211;XP_005380212;XP_005380213;XP_005380214;XP_005380215;XP_005380217;XP_005380218;XP_005380219;XP_013367438;XP_013367439;XP_013367440;XP_013367441;XP_013367442;XP_013367443 MODEL 9004993 protein-coding LOC102019781 solute carrier family 22 member 17 NW_004955409 36988460 36990937 + 102019781 AGCD01010486;XM_013510429 XP_013365883 MODEL 8970067 protein-coding Ahcyl2 adenosylhomocysteinase like 2 ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); neuron projection (ortholog) NW_004955479 10008814 10211370 + 102008848 AGCD01056515;AGCD01056516;AGCD01056517;AGCD01056518;AGCD01056519;AGCD01056520;AGCD01056521;AGCD01056522;AGCD01056523;AGCD01056524;AGCD01056525;AGCD01056526;AGCD01056527;AGCD01056528;AGCD01056529;GBBH01214807;GBDK01084835;XM_013503272 XP_013358726 MODEL 8811974 protein-coding Ggt6 gamma-glutamyltransferase 6 PARTICIPATES IN glutathione metabolic pathway; glutathione synthase deficiency pathway; glutathionuria disease pathway NW_004955467 12385525 12388806 + 102011296 AGCD01051632;GBDJ01280029;XM_005399682;XM_005399683 XP_005399739;XP_005399740 MODEL 8927359 ncrna LOC102010941 uncharacterized LOC102010941 NW_004955435 16643784 16657404 - 102010941 AGCD01033336;GBDF01056722;XR_261709 MODEL 8919683 protein-coding Edc3 enhancer of mRNA decapping 3 ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 50 (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog) NW_004955450 3193150 3249933 + 102011380 AGCD01042426;GBDF01082254;XM_005393548;XM_005393549 XP_005393605;XP_005393606 MODEL 8701952 protein-coding Klf12 KLF transcription factor 12 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH schizophrenia (ortholog); substance-related disorder (ortholog) NW_004955404 32715636 33127525 + 102025205 AGCD01004053;AGCD01004054;AGCD01004055;AGCD01004056;AGCD01004057;AGCD01004058;GBDI01055813;XM_005374183;XM_013516591;XM_013516595;XM_013516598 XP_005374240;XP_013372045;XP_013372049;XP_013372052 MODEL 39132417 snrna U6 U6 spliceosomal RNA 8992388 protein-coding Atxn7l3b ataxin 7 like 3B INVOLVED IN regulation of gene expression (ortholog); FOUND IN cytoplasm (ortholog) NW_004955405 14093770 14097409 + 102007182 AGCD01004919;GBDF01050886;XM_005374326 XP_005374383 MODEL 8871990 pseudo LOC102003621 chromobox protein homolog 3 pseudogene NW_004955455 2292708 2293259 - 102003621 AGCD01045592;XM_005396565 MODEL 9011810 protein-coding Pebp4 phosphatidylethanolamine binding protein 4 NW_004955403 46126263 46317830 - 102015475 AGCD01002850;AGCD01002851;AGCD01002852;AGCD01002853;AGCD01002854;AGCD01002855;GBBH01102343;XM_005373691;XM_013513921 XP_005373748;XP_013369375 MODEL 8971229 protein-coding LOC102024261 olfactory receptor 1052-like NW_004955511 2737665 2739242 - 102024261 AGCD01066427;GBDF01076871;XM_005408019 XP_005408076 MODEL 9063907 protein-coding Hhat hedgehog acyltransferase ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN N-terminal peptidyl-L-cysteine N-palmitoylation (ortholog); positive regulation of smoothened signaling pathway (ortholog); protein palmitoylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH chondrodysplasia-pseudohermaphroditism syndrome (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955489 1553580 1868088 - 102016278 AGCD01059842;AGCD01059843;AGCD01059844;AGCD01059845;AGCD01059846;AGCD01059847;AGCD01059848;AGCD01059849;AGCD01059850;AGCD01059851;GBBH01106877;GBBH01106882;XM_013504483 XP_013359937 MODEL 8885857 protein-coding LOC102017453 neutrophil gelatinase-associated lipocalin-like NW_004955419 593659 597689 - 102017453 AGCD01019598;GBCE01033254;XM_005382380 XP_005382437 MODEL 8926409 protein-coding Bnipl BCL2 interacting protein like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); negative regulation of cell population proliferation (ortholog); regulation of growth rate (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955588 409509 417825 + 102021295 AGCD01076109;GBCC01012774;XM_005414480;XM_005414481;XM_005414482;XR_001232525 XP_005414537;XP_005414538;XP_005414539 MODEL 8702408 protein-coding Amer3 APC membrane recruitment protein 3 ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN nuclear body (ortholog) NW_004955459 267754 277422 + 102014424 AGCD01047931;GBDF01117001;XM_005397547;XM_013521051;XR_263003;XR_263004 XP_005397604;XP_013376505 MODEL 8782074 pseudo LOC102010150 high mobility group protein B1 pseudogene NW_004955415 3445227 3445862 + 102010150 AGCD01015938 MODEL 9000533 protein-coding Trappc1 trafficking protein particle complex subunit 1 FOUND IN TRAPP complex (ortholog) NW_004955467 9010936 9012796 + 102026844 AGCD01051481;GBDF01046835;XM_005399442 XP_005399499 MODEL 8821371 pseudo LOC102015176 LYR motif-containing protein 1 pseudogene NW_004955456 15977550 15980397 - 102015176 AGCD01046681 MODEL 8724324 protein-coding Ptpn5 protein tyrosine phosphatase non-receptor type 5 ENCODES a protein that exhibits identical protein binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN exploration behavior (ortholog); negative regulation of MAP kinase activity (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Nerve Degeneration (ortholog); FOUND IN axon (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) NW_004955414 33381783 33436974 - 102025349 AGCD01015805;AGCD01015806;GBDF01076364;XM_005380426;XM_013512076 XP_005380483;XP_013367530 MODEL 8899589 protein-coding Bcat2 branched chain amino acid transaminase 2 ENCODES a protein that exhibits branched-chain-amino-acid transaminase activity (ortholog); L-isoleucine-2-oxoglutarate transaminase activity (ortholog); L-leucine-2-oxoglutarate transaminase activity (ortholog); INVOLVED IN branched-chain amino acid biosynthetic process (ortholog); branched-chain amino acid catabolic process (ortholog); branched-chain amino acid metabolic process (ortholog); PARTICIPATES IN valine, leucine and isoleucine biosynthetic pathway; valine, leucine and isoleucine degradation pathway; ASSOCIATED WITH hypervalinemia and hyperleucine-isoleucinemia (ortholog); maple syrup urine disease (ortholog); pre-malignant neoplasm (ortholog); FOUND IN mitochondrion (ortholog) NW_004955559 1785253 1796838 + 102030010 AGCD01073666;GBBH01065802;XM_013509037 XP_013364491 MODEL 8967483 protein-coding Atg10 autophagy related 10 ENCODES a protein that exhibits Atg12 conjugating enzyme activity (ortholog); Atg12 transferase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); ER overload response (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Neoplasms (ortholog) NW_004955418 28118843 28368358 - 102012096 AGCD01019428;AGCD01019429;AGCD01019430;AGCD01019431;AGCD01019432;AGCD01019433;AGCD01019434;AGCD01019435;GBDJ01128461;XM_013513063;XM_013513064;XM_013513065;XM_013513066 XP_013368517;XP_013368518;XP_013368519;XP_013368520 MODEL 39133371 snrna U4 U4 spliceosomal RNA 8731343 protein-coding Wfdc2 WAP four-disulfide core domain 2 ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH Bronchiectasis and Nasal Polyposis (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955445 11723634 11730304 - 102004654 AGCD01039714;GBDF01122565;XM_005392423;XM_013518349 XP_005392480;XP_013373803 MODEL 8761497 protein-coding Isl2 ISL LIM homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of neuron differentiation (ortholog); neuron fate commitment (ortholog); retinal ganglion cell axon guidance (ortholog); FOUND IN nucleus (ortholog) NW_004955450 1471586 1475702 + 102017404 AGCD01042364;GBDF01113385;XM_005393472;XM_005393473 XP_005393529;XP_005393530 MODEL 39133347 snrna U4 U4 spliceosomal RNA 8947632 protein-coding Fmn2 formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cell migration (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 47 (ortholog); genetic disease (ortholog); Hirschsprung's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955406 11358585 11666102 - 102018256 AGCD01005884;AGCD01005885;AGCD01005886;AGCD01005887;AGCD01005888;AGCD01005889;AGCD01005890;AGCD01005891;AGCD01005892;AGCD01005893;GBDK01276272;XM_005375457 XP_005375514 MODEL 39131616 rrna 5S_rRNA 5S ribosomal RNA 8960763 protein-coding Ggt7 gamma-glutamyltransferase 7 INVOLVED IN negative regulation of response to oxidative stress (ortholog); FOUND IN plasma membrane (ortholog) NW_004955422 26503755 26529363 + 102018297 AGCD01023288;AGCD01023289;GBBH01177567;XM_005384815;XM_005384816;XM_013514055 XP_005384872;XP_005384873;XP_013369509 MODEL 8853797 protein-coding Sgf29 SAGA complex associated factor 29 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); methylation-dependent protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetic retinopathy (ortholog); FOUND IN ATAC complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955493 6759426 6774796 + 102018505 AGCD01061137;GBCB01041570;XM_005405175;XM_005405176;XM_005405177 XP_005405232;XP_005405233;XP_005405234 MODEL 8748329 protein-coding Pon2 paraoxonase 2 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN lactone catabolic process (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955432 11988009 12020702 - 102018011 AGCD01030958;AGCD01030959;AGCD01030960;GBBH01032040;XM_005388064 XP_005388121 MODEL 39131384 protein-coding GPR146 G protein-coupled receptor 146 8766958 ncrna LOC102012592 uncharacterized LOC102012592 NW_004955583 223012 224427 - 102012592 AGCD01075806;GBDF01221589;XR_001232492 MODEL 8890048 ncrna LOC102021564 uncharacterized LOC102021564 NW_004955422 29420063 29427084 + 102021564 AGCD01023393;GBDF01255637;XR_001233889 MODEL 8860869 protein-coding Tufm Tu translation elongation factor, mitochondrial ENCODES a protein that exhibits translation elongation factor activity (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); response to ethanol (ortholog); translational elongation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 4 (ortholog); Esophageal Neoplasms (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog); synapse (ortholog) NW_004955493 6619205 6623780 + 102015534 AGCD01061122;GBDI01059775;XM_005405167 XP_005405224 MODEL 10253419 protein-coding LOC106147160 uncharacterized LOC106147160 NW_004955524 1216167 1224898 - 106147160 AGCD01068739;GBDF01005774;XM_013507188 XP_013362642 MODEL 39133560 snrna U2 U2 spliceosomal RNA 39132193 rrna 5S_rRNA 5S ribosomal RNA 39133840 misc_rna 7SK 7SK RNA 8867423 pseudo LOC102019782 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955462 2855640 2858078 - 102019782 AGCD01049188 MODEL 9057000 pseudo LOC102010942 2-hydroxyacylsphingosine 1-beta-galactosyltransferase pseudogene NW_004955526 532505 539029 - 102010942 AGCD01069240 MODEL 8732133 protein-coding Dnlz DNL-type zinc finger ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955513 4359421 4361081 + 102009745 AGCD01066927;GBCB01023282;XM_013506617 XP_013362071 MODEL 9040653 protein-coding Adcyap1r1 ADCYAP receptor type I ENCODES a protein that exhibits adenylate cyclase binding (ortholog); pituitary adenylate cyclase-activating polypeptide receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cAMP metabolic process (ortholog); ASSOCIATED WITH asthma (ortholog); cystitis (ortholog); Reperfusion Injury (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell surface (ortholog) NW_004955410 32176683 32229187 + 102024318 AGCD01011335;AGCD01011336;GBBH01079724;GBCE01117049;XM_013510664;XM_013510665 XP_013366118;XP_013366119 MODEL 8930557 protein-coding Amfr autocrine motility factor receptor ENCODES a protein that exhibits BAT3 complex binding (ortholog); identical protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); learning or memory (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amenorrhea (ortholog); breast ductal carcinoma (ortholog); FOUND IN dendrite (ortholog); Derlin-1 retrotranslocation complex (ortholog); endoplasmic reticulum (ortholog) NW_004955433 14172871 14205484 - 102011692 AGCD01031707;AGCD01031708;GBCC01017957;GBCE01028798;XM_013516124 XP_013371578 MODEL 8884861 ncrna LOC102018207 uncharacterized LOC102018207 NW_004955508 4313935 4333410 - 102018207 AGCD01065865;AGCD01065866;GBDJ01266761;XR_001231653 MODEL 8778194 protein-coding Rgs5 regulator of G protein signaling 5 INVOLVED IN negative regulation of vascular associated smooth muscle cell proliferation (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH colorectal adenocarcinoma (ortholog); essential hypertension (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) NW_004955462 13228110 13288063 + 102008706 AGCD01049422;AGCD01049423;GBDF01305569;XM_005398257;XM_005398258 XP_005398314;XP_005398315 MODEL 8699553 protein-coding LOC102005362 olfactory receptor 51I2 NW_004955414 21355079 21356017 + 102005362 AGCD01015416;XM_005380086 XP_005380143 MODEL 8999668 protein-coding Islr immunoglobulin superfamily containing leucine rich repeat NW_004955450 3604116 3607126 - 102018244 AGCD01042436;GBDJ01025699;XM_005393574;XM_013519042 XP_005393631;XP_013374496 MODEL 39131352 protein-coding CHN1 chimerin 1 8983988 protein-coding Arfgap3 ARF GTPase activating protein 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN presynaptic endocytosis (ortholog); protein secretion (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); photoreceptor ribbon synapse (ortholog) NW_004955413 28058252 28108656 - 102014037 AGCD01014549;AGCD01014550;AGCD01014551;AGCD01014552;GBCE01076485;XM_005379428 XP_005379485 MODEL 8797986 protein-coding LOC102024264 olfactory receptor 4C15-like NW_004955511 221759 222697 + 102024264 AGCD01066325;XM_013506519 XP_013361973 MODEL 8753201 protein-coding Pllp plasmolipin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN monoatomic ion transport (ortholog); myelin assembly (ortholog); myelination (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); schizophrenia (ortholog); FOUND IN apical plasma membrane (ortholog); compact myelin (ortholog); membrane raft (ortholog) NW_004955433 14896087 14915794 - 102025039 AGCD01031731;AGCD01031732;GBBH01093584;XM_005388384 XP_005388441 MODEL 8939103 protein-coding Hhatl hedgehog acyltransferase like INVOLVED IN negative regulation of N-terminal protein palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955420 28110462 28117454 + 102025250 AGCD01021470;GBBH01218883;XM_005383532;XM_013513520;XM_013513521 XP_005383589;XP_013368974;XP_013368975 MODEL 9001664 protein-coding Pecam1 platelet and endothelial cell adhesion molecule 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein phosphatase binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); bicellular tight junction assembly (ortholog); cell adhesion (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); atherosclerosis (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); cell-cell contact zone (ortholog) NW_004955478 7448584 7531860 + 102014777 AGCD01055964;AGCD01055965;AGCD01055966;AGCD01055967;AGCD01055968;AGCD01055969;AGCD01055970;AGCD01055971;AGCD01055972;AGCD01055973;AGCD01055974;AGCD01055975;GBCQ01033991;XM_005402168;XM_013503222;XM_013503223;XM_013503224 XP_005402225;XP_013358676;XP_013358677;XP_013358678 MODEL 8922613 pseudo LOC102017454 KATNB1-like protein 1 pseudogene NW_004955483 7603210 7604135 - 102017454 AGCD01057807 MODEL 8849488 protein-coding Cbx6 chromobox 6 ENCODES a protein that exhibits single-stranded RNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH glioblastoma (ortholog); FOUND IN heterochromatin (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955413 24955721 24966015 - 102026204 AGCD01014388;GBBH01142614;XM_005379281;XM_005379282 XP_005379338;XP_005379339 MODEL 8778956 trna Trnal-uaa transfer RNA leucine (anticodon UAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465;NW_004955436;NW_004955465 13142581;16282643;13312190 13142663;16282725;13312272 -;-;- 101978788 AGCD01033911;AGCD01050590;AGCD01050597 MODEL 39134103 misc_rna 7SK 7SK RNA 8945162 ncrna LOC102015177 uncharacterized LOC102015177 NW_004955457 14027628 14069849 - 102015177 AGCD01047055;AGCD01047056;AGCD01047057;GBDF01125568;XR_001236405 MODEL 8777430 protein-coding Ahdc1 AT-hook DNA binding motif containing 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); promoter-enhancer loop anchoring activity (ortholog); INVOLVED IN adipose tissue development (ortholog); aerobic respiration (ortholog); energy reserve metabolic process (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 3 (ortholog); autism spectrum disorder (ortholog); cerebellar hypoplasia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 6767250 6832989 - 102005102 AGCD01044125;AGCD01044126;AGCD01044127;GBDK01394363;XM_005394910;XM_005394912;XM_005394914;XM_005394915;XM_005394916;XM_005394917;XM_013519581 XP_005394967;XP_005394969;XP_005394971;XP_005394972;XP_005394973;XP_005394974;XP_013375035 MODEL 39133563 snrna U2 U2 spliceosomal RNA 8741119 pseudo LOC102020067 chromobox protein homolog 3 pseudogene NW_004955448 4628629 4629519 - 102020067 AGCD01041350 MODEL 8704307 protein-coding Ptpn6 protein tyrosine phosphatase non-receptor type 6 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cytokine receptor binding (ortholog); natural killer cell lectin-like receptor binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); CD27 signaling pathway (ortholog); cell differentiation (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH anogenital venereal wart (ortholog); autism spectrum disorder (ortholog); calcinosis (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); apical dendrite (ortholog); cell-cell junction (ortholog) NW_004955413 4525954 4547177 + 102009165 AGCD01013621;GBCQ01152113;XM_005378847;XM_005378848 XP_005378904;XP_005378905 MODEL 9018952 protein-coding Klf13 KLF transcription factor 13 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of erythrocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH chromosome 15q13.3 microdeletion syndrome (ortholog); colorectal cancer (ortholog); congenital heart disease (ortholog) NW_004955416 30087705 30137437 + 102018492 AGCD01017678;AGCD01017679;GBCQ01123785;XM_005381669;XM_005381670;XM_005381671;XM_005381672;XM_005381674;XM_013512596;XM_013512597 XP_005381726;XP_005381727;XP_005381728;XP_005381729;XP_005381731;XP_013368050;XP_013368051 MODEL 8992721 protein-coding Edc4 enhancer of mRNA decapping 4 PARTICIPATES IN microRNA pathway; FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8820578 8832428 - 102020916 AGCD01058398;GBBH01033452;XM_005403616;XM_013503883 XP_005403673;XP_013359337 MODEL 9006026 protein-coding Atg101 autophagy related 101 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN phagophore assembly site (ortholog) NW_004955547 2436974 2446849 + 102003385 AGCD01072280;AGCD01072281;GBCB01001472;XM_005411927;XM_013508473;XM_013508474 XP_005411984;XP_013363927;XP_013363928 MODEL 9043893 protein-coding Fat1 FAT atypical cadherin 1 INVOLVED IN actin filament organization (ortholog); camera-type eye development (ortholog); camera-type eye morphogenesis (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autosomal dominant cerebellar ataxia (ortholog); colorectal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955403 22502625 22618513 + 102015267 AGCD01002224;AGCD01002225;AGCD01002226;AGCD01002227;GBCE01030435;XM_005373425;XM_005373426;XM_005373427 XP_005373482;XP_005373483;XP_005373484 MODEL 8723546 protein-coding Tspan16 tetraspanin 16 NW_004955495 2234098 2249884 + 102018409 AGCD01061756;AGCD01061757;AGCD01061758;AGCD01061759;GBDF01001019;GBDF01058236;XM_005405647;XM_005405648 XP_005405704;XP_005405705 MODEL 8784868 protein-coding Wfdc3 WAP four-disulfide core domain 3 NW_004955445 11501044 11512109 + 102029675 AGCD01039697;AGCD01039698;GBDF01119525;XM_005392415;XM_005392416;XM_005392418;XM_013518337;XM_013518339 XP_005392472;XP_005392473;XP_005392475;XP_013373791;XP_013373793 MODEL 9066053 protein-coding Dnm1 dynamin 1 ENCODES a protein that exhibits D2 dopamine receptor binding (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN clathrin coat assembly involved in endocytosis (ortholog); endocytosis (ortholog); endosome organization (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Alzheimer's disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 31A (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); endocytic vesicle (ortholog) NW_004955570 752335 781770 + 102022757 AGCD01074764;AGCD01074765;GBCQ01007485;XM_013509390 XP_013364844 MODEL 8902996 protein-coding Ghdc GH3 domain containing FOUND IN endoplasmic reticulum (ortholog) NW_004955451 16247907 16251476 - 102016441 AGCD01043663;GBCB01111999;XM_005394453;XM_013519298 XP_005394510;XP_013374752 MODEL 8845347 protein-coding Add1 adducin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal anchor activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Conotruncal Cardiac Defects (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955514 1784302 1812845 + 102027219 AGCD01067064;GBDI01001021;XM_005408743;XM_005408744;XM_005408745;XM_005408746;XM_005408749 XP_005408800;XP_005408801;XP_005408802;XP_005408803;XP_005408806 MODEL 8868619 pseudo LOC102007169 N-acetylglucosamine-6-sulfatase pseudogene NW_004955402 44394601 44397598 - 102007169 AGCD01001113 MODEL 8763906 protein-coding Pon3 paraoxonase 3 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); arylesterase activity (ortholog); dihydrocoumarin hydrolase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); coumarin catabolic process (ortholog); lactone catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); FOUND IN extracellular space (ortholog) NW_004955432 11945383 11983417 - 102017689 AGCD01030957;AGCD01030958;GBDJ01087076;XM_005388063 XP_005388120 MODEL 8837918 protein-coding Gpr146 G protein-coupled receptor 146 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); defense response to virus (ortholog); regulation of cholesterol biosynthetic process (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 8747499 8762141 + 102015294 AGCD01048531;GBCE01009732;XM_005397797;XM_005397798 XP_005397854;XP_005397855 MODEL 8705649 protein-coding Trappc10 trafficking protein particle complex subunit 10 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH agnathia-otocephaly complex (ortholog); Arsenic Poisoning (ortholog); intellectual disability (ortholog); FOUND IN TRAPP complex (ortholog) NW_004955407 41271526 41347850 - 102029827 AGCD01007863;AGCD01007864;GBCQ01072221;GBDF01089628;XM_005375874 XP_005375931 MODEL 10184217 ncrna LOC106150133 uncharacterized LOC106150133 NW_004955465 2976003 2977065 + 106150133 AGCD01050365;GBDI01346536;XR_001236761 MODEL 10252596 protein-coding LOC106147161 translation initiation factor IF-2-like NW_004955524 1360928 1361851 - 106147161 AGCD01068748;AGCD01068749;GBBH01073899;GBDF01057450;XM_013507189 XP_013362643 MODEL 8759302 pseudo LOC102022574 eukaryotic translation initiation factor 4B pseudogene NW_004955464 1895737 1897508 + 102022574 AGCD01049957;XR_263224 MODEL 8749697 protein-coding Bccip BRCA2 and CDKN1A interacting protein ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); kinase regulator activity (ortholog); INVOLVED IN DNA damage response (ortholog); establishment of mitotic spindle orientation (ortholog); microtubule anchoring (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); mitotic spindle pole (ortholog) NW_004955477 3707230 3721195 + 102009834 AGCD01055561;AGCD01055562;GBDI01170730;XM_005401998 XP_005402055 MODEL 39132194 snrna U6 U6 spliceosomal RNA 39133372 snrna U4 U4 spliceosomal RNA 8722393 ncrna LOC102003630 uncharacterized LOC102003630 NW_004955461 9207794 9213408 + 102003630 AGCD01048943;GBDF01222087;XR_001236550;XR_001236551;XR_001236552 MODEL 8905654 protein-coding Auh AU RNA binding methylglutaconyl-CoA hydratase ENCODES a protein that exhibits enoyl-CoA hydratase activity (ortholog); methylglutaconyl-CoA hydratase activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 1 (ortholog); genetic disease (ortholog); renal tubular transport disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955515 971778 1124019 + 102006064 AGCD01067218;AGCD01067219;AGCD01067220;GBCQ01041316;GBCQ01041319;XM_013506890;XM_013506891 XP_013362344;XP_013362345 MODEL 8905245 protein-coding Sgip1 SH3GL interacting endocytic adaptor 1 ENCODES a protein that exhibits microtubule binding (ortholog); phospholipid binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN energy homeostasis (ortholog); plasma membrane tubulation (ortholog); positive regulation of eating behavior (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) NW_004955423 24155401 24353166 - 102019712 AGCD01024031;AGCD01024032;AGCD01024033;AGCD01024034;AGCD01024035;GBDK01397860;XM_013514516;XM_013514517;XM_013514518;XM_013514519;XM_013514520 XP_013369970;XP_013369971;XP_013369972;XP_013369973;XP_013369974 MODEL 8718309 protein-coding Hoxb2 homeobox B2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); dorsal/ventral pattern formation (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12693764 12697825 + 102004227 AGCD01043420;GBCQ01100488;XM_005394234;XM_005394235 XP_005394291;XP_005394292 MODEL 8782289 protein-coding LOC102021565 zinc finger protein 699 NW_004955495 832127 842376 - 102021565 AGCD01061657;GBDJ01173724;XM_005405565 XP_005405622 MODEL 8907098 protein-coding Wfdc5 WAP four-disulfide core domain 5 NW_004955445 12279799 12284819 + 102013123 AGCD01039749;GBDJ01360367;XM_005392453 XP_005392510 MODEL 8847566 protein-coding Tk2 thymidine kinase 2 ENCODES a protein that exhibits deoxycytidine kinase activity (ortholog); thymidine kinase activity (ortholog); INVOLVED IN deoxycytidine metabolic process (ortholog); deoxyribonucleotide metabolic process (ortholog); mitochondrial DNA metabolic process (ortholog); ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 3 (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955433 23075930 23106281 - 102019943 AGCD01031952;GBCB01120791;XM_005388462;XM_005388463;XM_005388466;XM_013516240;XM_013516241;XM_013516242 XP_005388519;XP_005388520;XP_005388523;XP_013371694;XP_013371695;XP_013371696 MODEL 39132196 rrna 5S_rRNA 5S ribosomal RNA 39133842 misc_rna 7SK 7SK RNA 8818596 protein-coding Pln phospholamban ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); centronuclear myopathy (ortholog); FOUND IN calcium ion-transporting ATPase complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955436 1439098 1447070 + 102010626 AGCD01033577;GBDK01316951;XM_005389124 XP_005389181 MODEL 8943035 ncrna LOC102019786 uncharacterized LOC102019786 NW_004955464 11956438 11958338 + 102019786 AGCD01050169;GBCE01074317;XR_001236679 MODEL 39133348 snrna U4 U4 spliceosomal RNA 39131617 rrna 5S_rRNA 5S ribosomal RNA 8957970 protein-coding LOC102010953 olfactory receptor 5-like NW_004955567 192924 193868 - 102010953 AGCD01074386;XM_005413283 XP_005413340 MODEL 8744412 protein-coding LOC102018211 WD repeat-containing protein 49-like NW_004955431 14732986 14816717 - 102018211 AGCD01030338;AGCD01030339;AGCD01030340;AGCD01030341;GBDF01022038;XM_013515901 XP_013371355 MODEL 8860439 protein-coding Fmnl1 formin like 1 ENCODES a protein that exhibits actin filament binding (ortholog); GTPase activating protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin filament severing (ortholog); substrate-dependent cell migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); phagocytic vesicle (ortholog); plasma membrane (ortholog) NW_004955451 17876017 17893683 + 102026066 AGCD01043780;AGCD01043781;GBDI01002143;GBDJ01389975;XM_013519160 XP_013374614 MODEL 8908127 protein-coding Klf14 KLF transcription factor 14 ENCODES a protein that exhibits chromatin binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of sphingolipid mediated signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Dyslipidemias (ortholog); Insulin Resistance (ortholog); type 2 diabetes mellitus (ortholog) NW_004955410 36891213 36932136 + 102030161 AGCD01011440;AGCD01011441;XM_013510501 XP_013365955 MODEL 8896831 protein-coding Ahi1 Abelson helper integration site 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell junction assembly (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cerebellar disease (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); centriole (ortholog) NW_004955439 1277185 1460296 + 102027679 AGCD01035610;AGCD01035611;AGCD01035612;AGCD01035613;AGCD01035614;GBDF01123056;XM_005390486;XM_013517380 XP_005390543;XP_013372834 MODEL 39132195 snrna U6 U6 spliceosomal RNA 8740934 ncrna LOC102010158 uncharacterized LOC102010158 NW_004955417 26308543 26333124 + 102010158 AGCD01018505;GBBH01097094;XR_001233384;XR_001233385 MODEL 8924399 protein-coding Boc BOC cell adhesion associated, oncogene regulated INVOLVED IN axon guidance (ortholog); positive regulation of myoblast differentiation (ortholog); smoothened signaling pathway (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); gastrointestinal stromal tumor (ortholog); holoprosencephaly (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); growth cone (ortholog) NW_004955427 13424478 13492527 + 102003160 AGCD01027249;AGCD01027250;AGCD01027251;GBDJ01189062;XM_005386397;XM_005386398;XM_013515110;XM_013515111;XM_013515112 XP_005386454;XP_005386455;XP_013370564;XP_013370565;XP_013370566 MODEL 9043841 ncrna LOC102012598 uncharacterized LOC102012598 NW_004955403 57139269 57141788 + 102012598 AGCD01003149;GBBH01126380;XR_001234448;XR_259277;XR_259278 MODEL 8884925 protein-coding Islr2 immunoglobulin superfamily containing leucine rich repeat 2 INVOLVED IN positive regulation of axon extension (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cell surface (ortholog) NW_004955450 3636575 3645521 - 102019222 AGCD01042439;GBCQ01186981;XM_005393576 XP_005393633 MODEL 9062499 protein-coding Fat2 FAT atypical cadherin 2 INVOLVED IN cell-substrate adhesion (ortholog); epithelial cell migration (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); spastic ataxia (ortholog); spinocerebellar ataxia 45 (ortholog); FOUND IN adherens junction (ortholog) NW_004955408 5944236 6033776 - 102020883 AGCD01008160;AGCD01008161;GBDI01137565;XM_005376163;XM_005376164 XP_005376220;XP_005376221 MODEL 8801966 protein-coding Ghitm growth hormone inducible transmembrane protein ENCODES a protein that exhibits calcium:proton antiporter activity (ortholog); INVOLVED IN calcium export from the mitochondrion (ortholog); calcium ion transport (ortholog); inner mitochondrial membrane organization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955510 3674303 3688747 + 102003568 AGCD01066246;AGCD01066247;GBDF01005517;GBDF01197615;XM_005407879 XP_005407936 MODEL 9008276 ncrna LOC102024265 uncharacterized LOC102024265 NW_004955512 989850 1004243 - 102024265 AGCD01066628;XR_264441 MODEL 9038307 protein-coding Chn2 chimerin 2 NW_004955410 30711970 30988787 + 102012291 AGCD01011313;GBDI01328531;XM_005377472;XM_005377474;XM_005377475 XP_005377529;XP_005377531;XP_005377532 MODEL 8848820 protein-coding Dnm1l dynamin 1 like ENCODES a protein that exhibits BH2 domain binding (ortholog); clathrin binding (ortholog); GTP-dependent protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to hypoxia (ortholog); cellular response to lipid (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); chronic kidney disease (ortholog); Coxsackievirus Infections (ortholog); FOUND IN brush border (ortholog); clathrin coat of trans-Golgi network vesicle (ortholog); clathrin-coated pit (ortholog) NW_004955505 3025742 3081491 - 102006689 AGCD01065013;AGCD01065014;AGCD01065015;GBCQ01150271;XM_005407112;XM_005407113;XM_005407114;XM_005407116;XM_005407117;XM_005407118;XM_005407119;XM_005407121;XM_013505924;XM_013505925 XP_005407169;XP_005407170;XP_005407171;XP_005407173;XP_005407174;XP_005407175;XP_005407176;XP_005407178;XP_013361378;XP_013361379 MODEL 8956716 ncrna LOC102017456 uncharacterized LOC102017456 NW_004955485 1028701 1070484 - 102017456 AGCD01058470;GBDF01021772;XR_001231092;XR_263903 MODEL 8708842 protein-coding Pecr peroxisomal trans-2-enoyl-CoA reductase ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); signaling receptor binding (ortholog); trans-2-enoyl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN phytol metabolic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955453 17059779 17109531 + 102025651 AGCD01044917;AGCD01044918;GBDF01081665;XM_005395692;XM_013519993 XP_005395749;XP_013375447 MODEL 9012361 trna Trnal-uag transfer RNA leucine (anticodon UAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955467;NW_004955550 8841723;1420231 8841804;1420312 +;+ 101978792 AGCD01051475;AGCD01072566 MODEL 9013394 ncrna LOC102015180 uncharacterized LOC102015180 NW_004955409 37788920 37825885 + 102015180 AGCD01010533;AGCD01010534;AGCD01010535;GBDF01253472;XR_001232673;XR_001232674;XR_001232675;XR_259813 MODEL 8999558 protein-coding Hhex hematopoietically expressed homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding, bending (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); polycystic liver disease (ortholog); steatotic liver disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955425 737506 742775 - 102013736 AGCD01025198;GBCE01089159;GBDJ01389317;XM_005386084 XP_005386141 MODEL 8974999 protein-coding LOC102021567 leucine-rich repeat-containing protein 37A3-like NW_004955423 16045714 16051514 - 102021567 AGCD01023823;GBDF01009647;XM_013514556 XP_013370010 MODEL 8834479 protein-coding Cbx7 chromobox 7 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9me2/3 reader activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN developmental process involved in reproduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH anaplastic thyroid carcinoma (ortholog); B-cell lymphoma (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); heterochromatin (ortholog) NW_004955413 25079627 25100039 - 102010792 AGCD01014395;GBBH01001308;GBDK01014246;XM_013511481 XP_013366935 MODEL 8770290 protein-coding Pop1 POP1 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); tRNA decay (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH anauxetic dysplasia 1 (ortholog); anauxetic dysplasia 2 (ortholog); genetic disease (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955417 13823027 13856448 + 102010157 AGCD01018191;GBCE01138351;XM_005381847 XP_005381904 MODEL 10094508 ncrna LOC106150134 uncharacterized LOC106150134 NW_004955465 11602487 11607340 + 106150134 AGCD01050530;GBBH01075159;XR_001236762 MODEL 8837581 protein-coding Amh anti-Mullerian hormone ENCODES a protein that exhibits signaling receptor binding (ortholog); transforming growth factor beta receptor binding (ortholog); type II transforming growth factor beta receptor binding (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); Leydig cell differentiation (ortholog); Mullerian duct regression (ortholog); ASSOCIATED WITH breast cancer (ortholog); disorder of sexual development (ortholog); Female Urogenital Diseases (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) NW_004955495 5893375 5896152 - 102016613 AGCD01062043;GBDJ01028983;XM_005405913 XP_005405970 MODEL 8884978 pseudo LOC102020070 ubiquitin carboxyl-terminal hydrolase isozyme L5 pseudogene NW_004955593 95196 95813 - 102020070 AGCD01076350 MODEL 9032189 protein-coding LOC102005363 olfactory receptor 10A4 NW_004955414 22800006 22800953 + 102005363 AGCD01015478;XM_005380181 XP_005380238 MODEL 8718979 protein-coding Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); misfolded protein binding (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); positive regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Zika fever (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955421 8196631 8225561 - 102029754 AGCD01021799;AGCD01021800;GBDI01139845;GBDK01133751;XM_005383919;XM_013513728 XP_005383976;XP_013369182 MODEL 8880799 protein-coding Ptpn7 protein tyrosine phosphatase non-receptor type 7 INVOLVED IN protein dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955406 38233409 38249940 - 102022461 AGCD01006598;AGCD01006599;GBCE01150962;XM_005375204;XM_005375205;XM_005375206;XM_005375207;XM_013522339;XM_013522342;XM_013522343 XP_005375261;XP_005375262;XP_005375263;XP_005375264;XP_013377793;XP_013377796;XP_013377797 MODEL 8881396 protein-coding Tspan17 tetraspanin 17 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog); regulation of membrane protein ectodomain proteolysis (ortholog) NW_004955408 28914392 28924352 + 102016239 AGCD01008734;GBCQ01039281;XM_005376397;XM_013509645;XM_013509648;XM_013509649 XP_005376454;XP_013365099;XP_013365102;XP_013365103 MODEL 9013499 protein-coding Tuft1 tuftelin 1 ENCODES a protein that exhibits structural constituent of skin epidermis (ortholog); ASSOCIATED WITH genetic disease (ortholog); palmoplantar keratoderma and woolly hair (ortholog); palmoplantar keratosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955589 817001 854492 - 102020069 AGCD01076183;GBCQ01003996;XM_005414569;XM_005414570 XP_005414626;XP_005414627 MODEL 8773011 protein-coding LOC102007172 PRAME family member 23-like NW_004955608 264738 312943 - 102007172 AGCD01077020;AGCD01077021;AGCD01077022;AGCD01077023;AGCD01077024;AGCD01077025;AGCD01077026;AGCD01077027;XM_013510118 XP_013365572 MODEL 9031883 protein-coding Fmnl2 formin like 2 ASSOCIATED WITH Crohn's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955440 17925982 18077176 + 102019643 AGCD01036589;AGCD01036590;AGCD01036591;AGCD01036592;AGCD01036593;AGCD01036594;AGCD01036595;GBBH01197804;XM_013517443 XP_013372897 MODEL 9034410 protein-coding Sgk1 serum/glucocorticoid regulated kinase 1 ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to aldosterone (ortholog); cellular response to insulin stimulus (ortholog); DNA damage response (ortholog); PARTICIPATES IN glucocorticoid signaling pathway; insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN nuclear speck (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955439 2399992 2406587 + 102006075 AGCD01035643;AGCD01035644;GBCE01001862;GBDK01016728;XM_013517384 XP_013372838 MODEL 8864750 protein-coding Trappc11 trafficking protein particle complex subunit 11 INVOLVED IN constitutive secretory pathway (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 23 (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2S (ortholog); FOUND IN Golgi apparatus (ortholog); TRAPP complex (ortholog) NW_004955403 25168212 25211344 - 102008808 AGCD01002283;GBCQ01149377;XM_005373500;XR_001233561 XP_005373557 MODEL 39133566 snrna U2 U2 spliceosomal RNA 8771470 protein-coding Tkfc triokinase and FMN cyclase ENCODES a protein that exhibits FAD-AMP lyase (cyclizing) activity (ortholog); glycerone kinase activity (ortholog); triokinase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); carbohydrate phosphorylation (ortholog); fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); inherited metabolic disorder (ortholog); Sengers syndrome (ortholog); FOUND IN cytosol (ortholog) NW_004955511 6200433 6235855 - 102017593 AGCD01066598;GBCE01135212;XM_005408164;XM_005408165;XM_005408166;XM_005408167;XM_005408168 XP_005408221;XP_005408222;XP_005408223;XP_005408224;XP_005408225 MODEL 9016102 pseudo LOC102015184 ornithine decarboxylase pseudogene NW_004955467 1607449 1608188 - 102015184 AGCD01051269 MODEL 39133373 snrna U4 U4 spliceosomal RNA 8866262 protein-coding Bcdin3d BCDIN3 domain containing RNA methyltransferase ENCODES a protein that exhibits O-methyltransferase activity (ortholog); pre-miRNA binding (ortholog); RNA methyltransferase activity (ortholog); INVOLVED IN negative regulation of pre-miRNA processing (ortholog); pre-miRNA processing (ortholog); RNA methylation (ortholog); ASSOCIATED WITH Moebius syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955547 427127 432482 - 102007597 AGCD01072154;AGCD01072155;GBDF01280886;XM_005411848 XP_005411905 MODEL 9001004 ncrna LOC102018213 uncharacterized LOC102018213 NW_004955433 14380516 14385234 + 102018213 AGCD01031721;GBDF01051190;XR_261596 MODEL 9034960 protein-coding Cbx8 chromobox 8 ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); single-stranded RNA binding (ortholog); ubiquitin-protein transferase activator activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); glioblastoma (ortholog); spastic cerebral palsy (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); nucleoplasm (ortholog) NW_004955506 3035510 3038204 + 102023503 AGCD01065307;GBDF01042358;XM_005407337 XP_005407394 MODEL 8709757 protein-coding Arfgef1 ARF guanine nucleotide exchange factor 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); myosin binding (ortholog); INVOLVED IN endomembrane system organization (ortholog); glycoprotein biosynthetic process (ortholog); Golgi organization (ortholog); ASSOCIATED WITH DEVELOPMENTAL DELAY, IMPAIRED SPEECH, AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES (ortholog); Developmental Disabilities (ortholog); Developmental Disease (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955444 11986595 12110172 + 102008357 AGCD01039059;AGCD01039060;GBCQ01064317;GBDF01053271;XM_005392122 XP_005392179 MODEL 8753880 protein-coding Add2 adducin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cytoskeletal anchor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH hereditary spherocytosis type 1 (ortholog); hypertension (ortholog); IgA glomerulonephritis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); F-actin capping protein complex (ortholog); glutamatergic synapse (ortholog) NW_004955424 14411279 14517813 + 102004179 AGCD01024654;GBDI01196110;XM_005385610;XM_005385611;XM_013514748 XP_005385667;XP_005385668;XP_013370202 MODEL 39132198 snrna U6 U6 spliceosomal RNA 39134104 misc_rna 7SK 7SK RNA 8978313 protein-coding Aunip aurora kinase A and ninein interacting protein ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of double-strand break repair via nonhomologous end joining (ortholog); spindle organization (ortholog); FOUND IN centrosome (ortholog); site of DNA damage (ortholog); spindle pole (ortholog) NW_004955452 5323345 5336589 - 102008686 AGCD01044018;GBDK01198486;XM_005394827;XM_005394828;XM_013519653 XP_005394884;XP_005394885;XP_013375107 MODEL 9005202 protein-coding Wfdc8 WAP four-disulfide core domain 8 NW_004955445 11666987 11682180 + 102030679 AGCD01039712;XM_013518242 XP_013373696 MODEL 8798995 protein-coding Hoxb3 homeobox B3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); cartilage development (ortholog); ASSOCIATED WITH Diaphragmatic Hernia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12651229 12690941 + 102004999 AGCD01043417;AGCD01043418;AGCD01043419;AGCD01043420;GBCQ01152577;XM_013519409;XM_013519410;XM_013519411 XP_013374863;XP_013374864;XP_013374865 MODEL 8970599 protein-coding Fat3 FAT atypical cadherin 3 INVOLVED IN cell morphogenesis (ortholog); negative regulation of dendrite development (ortholog); neuron migration (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); esophagus squamous cell carcinoma (ortholog); Hirschsprung's disease (ortholog); FOUND IN dendrite (ortholog) NW_004955414 1467087 2083914 - 102029847 AGCD01014771;AGCD01014772;AGCD01014773;AGCD01014774;AGCD01014775;AGCD01014776;AGCD01014777;AGCD01014778;GBCE01081538;GBCE01186707;XM_005379721;XM_013512035 XP_005379778;XP_013367489 MODEL 10289125 protein-coding Tspan18 tetraspanin 18 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); hemostasis (ortholog); inflammatory response (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cell periphery (ortholog) NW_004955422 2833124 2871460 - 106146238 AGCD01022495;XM_013514197;XM_013514198 XP_013369651;XP_013369652 MODEL 39133844 misc_rna 7SK 7SK RNA 9033392 pseudo LOC102022575 phosphoglycerate mutase 1-like NW_004955411 32207891 32260701 + 102022575 AGCD01012294;AGCD01012295;AGCD01012296;AGCD01012297;AGCD01012298 MODEL 8889125 protein-coding LOC102019790 ral guanine nucleotide dissociation stimulator-like NW_004955413 5501732 5505766 - 102019790 AGCD01013681;AGCD01013682;GBDF01087005;GBDF01087006;XM_013511378 XP_013366832 MODEL 8721643 protein-coding Rgs6 regulator of G protein signaling 6 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); positive regulation of neuron differentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); morphine dependence (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nucleoplasm (ortholog) NW_004955523 2763143 3366851 - 102004846 AGCD01068588;AGCD01068589;AGCD01068590;AGCD01068591;AGCD01068592;AGCD01068593;AGCD01068594;AGCD01068595;AGCD01068596;AGCD01068597;AGCD01068598;AGCD01068599;AGCD01068600;AGCD01068601;AGCD01068602;AGCD01068603;AGCD01068604;AGCD01068605;GBDJ01403741;XM_005409440;XM_005409442;XM_005409443;XM_013507178 XP_005409497;XP_005409499;XP_005409500;XP_013362632 MODEL 8982208 protein-coding Plod1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 ENCODES a protein that exhibits ferrous iron binding (ortholog); L-ascorbic acid binding (ortholog); peptide binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); epidermis development (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); cryptorchidism (ortholog); FOUND IN catalytic complex (ortholog) NW_004955486 1967771 1990561 - 102003972 AGCD01058976;AGCD01058977;GBCB01022681;GBDJ01076519;XM_005403978 XP_005404035 MODEL 39133349 snrna U4 U4 spliceosomal RNA 8942729 protein-coding Atg12 autophagy related 12 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Brain Injuries (ortholog); Hereditary Neoplastic Syndromes (ortholog); metabolic dysfunction-associated steatohepatitis (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); membrane (ortholog) NW_004955408 35607541 35620878 - 102025657 AGCD01008957;GBDJ01233683;XM_005376531 XP_005376588 MODEL 39131618 rrna 5S_rRNA 5S ribosomal RNA 8815895 protein-coding Ahnak AHNAK nucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); S100 protein binding (ortholog); structural molecule activity conferring elasticity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); Chloracne (ortholog); COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell contact zone (ortholog); costamere (ortholog) NW_004955599 629271 656564 + 102017409 AGCD01076663;AGCD01076664;AGCD01076665;GBBH01025974;XM_013510061 XP_013365515 MODEL 8998179 protein-coding Klf15 KLF transcription factor 15 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cardiac muscle hypertrophy in response to stress (ortholog); cellular response to endothelin (ortholog); glial cell differentiation (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); Cardiac Fibrosis (ortholog); endomyocardial fibrosis (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 21609709 21618920 - 102019071 AGCD01022112;GBCB01039022;GBCB01039023;XM_013513752 XP_013369206 MODEL 9044391 pseudo LOC102010159 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like NW_004955417 3869752 3882123 - 102010159 AGCD01017930;AGCD01017931 MODEL 8985441 protein-coding LOC102012606 dual specificity protein phosphatase 18-like NW_004955453 12279178 12280813 + 102012606 AGCD01044830;XM_013519757 XP_013375211 MODEL 9066078 protein-coding Bod1 biorientation of chromosomes in cell division 1 ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic sister chromatid biorientation (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); FOUND IN centrosome (ortholog); outer kinetochore (ortholog); spindle microtubule (ortholog) NW_004955408 26235229 26242576 - 102025658 AGCD01008665;GBDF01008932;XM_005376586 XP_005376643 MODEL 9035736 ncrna LOC102024275 uncharacterized LOC102024275 NW_004955540 1652575 1655151 - 102024275 AGCD01071306;GBDF01189067;XR_264819 MODEL 8807737 protein-coding Cby1 chibby 1, beta catenin antagonist ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cilium assembly (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Joubert syndrome (ortholog); otitis media (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955413 24781102 24794537 + 102021544 AGCD01014379;GBBH01092384;XM_005379264;XM_005379265;XM_005379266;XR_260106 XP_005379321;XP_005379322;XP_005379323 MODEL 9035428 pseudo LOC102017459 arylacetamide deacetylase-like 4 NW_004955486 1078117 1079688 - 102017459 AGCD01058920 MODEL 8721124 protein-coding Dnm2 dynamin 2 ENCODES a protein that exhibits D2 dopamine receptor binding (ortholog); GTPase activity (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN actin filament bundle organization (ortholog); aorta development (ortholog); autophagy (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; syndecan signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy (ortholog); centronuclear myopathy 1 (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); centriole (ortholog) NW_004955495 1860644 1934589 + 102012552 AGCD01061736;AGCD01061737;AGCD01061738;AGCD01061739;GBDF01010591;XM_005405625;XM_005405626;XM_005405627;XM_005405628;XM_005405629;XM_005405630 XP_005405682;XP_005405683;XP_005405684;XP_005405685;XP_005405686;XP_005405687 MODEL 8981116 pseudo LOC102021570 60S acidic ribosomal protein P0 pseudogene NW_004955423 3215518 3216685 - 102021570 AGCD01023509 MODEL 8802733 protein-coding Fmnl3 formin like 3 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell migration (ortholog); filopodium assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955547 253149 311157 - 102005513 AGCD01072141;AGCD01072142;AGCD01072143;GBCB01007830;XM_005411841;XM_005411842;XM_005411843;XM_005411844;XM_013508461;XM_013508462 XP_005411898;XP_005411899;XP_005411900;XP_005411901;XP_013363915;XP_013363916 MODEL 39133568 snrna U2 U2 spliceosomal RNA 8742958 protein-coding LOC102010954 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1373617 1378077 + 102010954 AGCD01074469;GBBH01148932;GBDK01175825;XM_013509300 XP_013364754 MODEL 8732000 pseudo LOC102003632 60S ribosomal protein L35a pseudogene NW_004955462 10954407 10954736 - 102003632 AGCD01049379;XM_005398243 MODEL 8701260 pseudo LOC102015185 60S acidic ribosomal protein P0 pseudogene NW_004955467 10206250 10209516 - 102015185 AGCD01051553 MODEL 8828854 protein-coding Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); positive regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955422 26243034 26271849 + 102015325 AGCD01023283;AGCD01023284;GBDI01078947;XM_005384804 XP_005384861 MODEL 8758750 protein-coding LOC102005364 sulfotransferase 1C3 NW_004955470 11921964 11938687 + 102005364 AGCD01052911;AGCD01052912;AGCD01052913;AGCD01052914;GBCQ01008545;GBCQ01008546;XM_013522838 XP_013378292 MODEL 8986635 protein-coding Ptpn9 protein tyrosine phosphatase non-receptor type 9 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); positive regulation of protein localization to plasma membrane (ortholog); FOUND IN cytoplasm (ortholog); neuron projection terminus (ortholog) NW_004955450 2725755 2796390 + 102027249 AGCD01042400;AGCD01042401;AGCD01042402;AGCD01042403;AGCD01042404;AGCD01042405;AGCD01042406;AGCD01042407;GBCB01073974;GBDF01189354;XM_005393506 XP_005393563 MODEL 8703756 protein-coding Bche butyrylcholinesterase ENCODES a protein that exhibits acetylcholinesterase activity (ortholog); choline binding (ortholog); cholinesterase activity (ortholog); INVOLVED IN choline metabolic process (ortholog); learning (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN heroin pharmacodynamics pathway; heroin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Acholinesterasemia (ortholog); Alzheimer's disease (ortholog); amnestic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); extracellular space (ortholog) NW_004955448 15327374 15396827 - 102010751 AGCD01041663;AGCD01041664;GBDJ01278447;JN633046;XM_005393137;XM_005393138;XM_013518684 AEO94791;XP_005393194;XP_005393195;XP_013374138 MODEL 39132197 rrna 5S_rRNA 5S ribosomal RNA 8840211 pseudo LOC102018214 retinal dehydrogenase 1-like NW_004955434 130312 183170 - 102018214 AGCD01031996;AGCD01031997;AGCD01031998;AGCD01031999;AGCD01032000 MODEL 10071273 protein-coding LOC106147162 basic proline-rich protein-like NW_004955524 2754870 2755157 - 106147162 AGCD01068834;GBDJ01268040;XM_013507195 XP_013362649 MODEL 8874749 protein-coding Ghr growth hormone receptor ENCODES a protein that exhibits growth factor binding (ortholog); growth hormone receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN growth hormone signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); growth hormone receptor complex (ortholog) NW_004955426 26553509 26873619 + 102013852 AF332036;AF520660;AGCD01026773;AGCD01026774;AGCD01026775;AGCD01026776;AGCD01026777;AGCD01026778;AGCD01026779;AGCD01026780;AGCD01026781;AGCD01026782;AGCD01026783;AGCD01026784;AGCD01026785;AGCD01026786;AY701337;GBBH01051006;GBCE01118144;XM_013514982;XM_013514983 AAK71912;AAO73203;AAU06306;XP_013370436;XP_013370437 MODEL 8780548 protein-coding Ism1 isthmin 1 INVOLVED IN negative regulation of angiogenesis (ortholog) NW_004955415 22722534 22789730 + 102029391 AGCD01016541;AGCD01016542;GBCE01045495;XM_005380884 XP_005380941 MODEL 8962566 protein-coding LOC102007173 translation initiation factor IF-2-like NW_004955451 5638379 5640035 + 102007173 AGCD01043171;GBDF01005683;XM_013519255 XP_013374709 MODEL 8829960 protein-coding Klf16 KLF transcription factor 16 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN G protein-coupled dopamine receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955495 6178565 6189469 + 102014149 AGCD01062056;GBCE01008921;GBDK01194291;XM_013505274 XP_013360728 MODEL 39134105 misc_rna 7SK 7SK RNA 8919745 protein-coding Chodl chondrolectin ENCODES a protein that exhibits hyaluronic acid binding (ortholog); INVOLVED IN regulation of neuron projection development (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955407 19483569 19507270 + 102014320 AGCD01007306;GBDI01221529;XM_005375582;XM_005375583 XP_005375639;XP_005375640 MODEL 8998965 protein-coding Add3 adducin 3 ENCODES a protein that exhibits protein kinase C binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN positive regulation of cytoskeleton organization (ortholog); positive regulation of vasoconstriction (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); brain ischemia (ortholog); cerebral palsy (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) NW_004955485 1216435 1273275 - 102017665 AGCD01058474;AGCD01058475;GBDF01128305;XM_005403759;XM_013504104 XP_005403816;XP_013359558 MODEL 8740363 protein-coding Pef1 penta-EF-hand domain containing 1 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN COPII vesicle coating (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); neural crest cell development (ortholog); FOUND IN COPII vesicle coat (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955452 10038380 10055871 - 102011171 AGCD01044267;AGCD01044268;GBBH01165087;XM_005395031 XP_005395088 MODEL 9001914 protein-coding Aup1 AUP1 lipid droplet regulating VLDL assembly factor ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); FOUND IN autophagosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 11259288 11262413 + 102022511 AGCD01024559;GBDI01001881;XM_005385487;XM_005385488;XM_013514652;XM_013514653;XM_013514654 XP_005385544;XP_005385545;XP_013370106;XP_013370107;XP_013370108 MODEL 8996849 protein-coding Sgk2 serum/glucocorticoid regulated kinase 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955445 13581145 13625320 - 102026270 AGCD01039794;AGCD01039795;AGCD01039796;AGCD01039797;AGCD01039798;AGCD01039799;GBCQ01033867;XM_005392499;XM_013518253;XR_001235575 XP_005392556;XP_013373707 MODEL 9037829 pseudo LOC102020074 zinc finger and BTB domain-containing protein 44-like NW_004955403 32030333 32210833 + 102020074 AGCD01002425;AGCD01002426;AGCD01002427;AGCD01002428;AGCD01002429;AGCD01002430;AGCD01002431;AGCD01002432 MODEL 10285575 ncrna LOC106150135 uncharacterized LOC106150135 NW_004955465 7201865 7211516 - 106150135 AGCD01050457;GBDF01262745;XR_001236764 MODEL 39133845 misc_rna 7SK 7SK RNA 9024922 protein-coding Pop4 POP4 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955468 7983394 7994863 - 102012524 AGCD01052018;GBDI01104355;XM_005400112;XM_005400113;XM_005400114;XM_005400115 XP_005400169;XP_005400170;XP_005400171;XP_005400172 MODEL 8916792 protein-coding Trappc12 trafficking protein particle complex subunit 12 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND SPASTICITY (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); kinetochore (ortholog) NW_004955487 3824872 3863859 - 102019177 AGCD01059294;AGCD01059295;GBDF01120062;XM_005404378 XP_005404435 MODEL 8916360 protein-coding LOC102022578 heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like NW_004955467 3848579 3956203 + 102022578 AGCD01051347;AGCD01051348;AGCD01051349;AGCD01051350;AGCD01051351;AGCD01051352;AGCD01051353;AGCD01051354;GBBH01213909;GBCQ01153185;XM_013522023 XP_013377477 MODEL 8983057 protein-coding Cby2 chibby family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955518 3395464 3410616 + 102015978 AGCD01067802;GBDF01014802;XM_005409088;XM_005409090 XP_005409145;XP_005409147 MODEL 8760357 protein-coding Gpr148 G protein-coupled receptor 148 FOUND IN plasma membrane (ortholog) NW_004955459 227998 237053 + 102004459 AGCD01047929;GBDF01148299;XM_005397702 XP_005397759 MODEL 39133350 snrna U4 U4 spliceosomal RNA 39133375 snrna U4 U4 spliceosomal RNA 9014710 ncrna LOC102010958 uncharacterized LOC102010958 NW_004955402 5775147 5790716 - 102010958 AGCD01000140;AGCD01000141;GBDI01357888;XR_259032 MODEL 39131619 rrna 5S_rRNA 5S ribosomal RNA 8845135 protein-coding Plod2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 ENCODES a protein that exhibits procollagen glucosyltransferase activity (ortholog); procollagen-lysine 5-dioxygenase activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); obsolete hydroxylysine biosynthetic process (ortholog); ASSOCIATED WITH Bone Neoplasms (ortholog); Bruck syndrome (ortholog); Bruck Syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955474 11392163 11473918 + 102020659 AGCD01054622;AGCD01054623;AGCD01054624;GBDF01305945;GBDJ01137009;XM_005401440;XM_005401441 XP_005401497;XP_005401498 MODEL 39132201 snrna U6 U6 spliceosomal RNA 8951010 protein-coding Fmo1 flavin containing dimethylaniline monoxygenase 1 ENCODES a protein that exhibits hypotaurine monooxygenase activity (ortholog); monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); negative regulation of fatty acid oxidation (ortholog); organic acid metabolic process (ortholog); PARTICIPATES IN tamoxifen pharmacodynamics pathway; tamoxifen pharmacokinetics pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autism spectrum disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955406 11882656 11915875 + 102022158 AGCD01005897;AGCD01005898;GBDF01063029;XM_005374832;XM_005374833 XP_005374889;XP_005374890 MODEL 9006013 trna Trnam-cau transfer RNA methionine (anticodon CAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978797 AGCD01050592;AGCD01050595;AGCD01050596;AGCD01050607;AGCD01050636;AGCD01057602;AGCD01057629;AGCD01057630;AGCD01071784 MODEL 9017381 protein-coding Hhip hedgehog interacting protein ENCODES a protein that exhibits hedgehog family protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); dorsal/ventral pattern formation (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); chronic obstructive pulmonary disease (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955428 657918 745255 + 102028879 AGCD01027582;AGCD01027583;GBDK01181950;XM_005386630;XM_005386632;XM_013515324 XP_005386687;XP_005386689;XP_013370778 MODEL 8912971 protein-coding Bod1l1 biorientation of chromosomes in cell division 1 like 1 INVOLVED IN DNA damage response (ortholog); replication fork processing (ortholog) NW_004955480 10143053 10189194 + 102025577 AGCD01056757;GBCE01104986;GBDF01162845;XM_013503319 XP_013358773 MODEL 9029086 protein-coding LOC102024281 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like NW_004955439 14974380 14974592 + 102024281 AGCD01035995;XM_005390647 XP_005390704 MODEL 8840159 protein-coding Hoxb4 homeobox B4 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone marrow development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12661290 12665576 + 102015592 AGCD01043417;AGCD01043418;GBDK01056815;XM_005394601 XP_005394658 MODEL 8733829 ncrna LOC102017461 uncharacterized LOC102017461 NW_004955421 27031027 27040209 - 102017461 AGCD01022278;GBDF01222098;XR_001233849 MODEL 10298463 protein-coding LOC106147163 vomeronasal type-2 receptor 116-like NW_004955524 4271669 4318987 - 106147163 AGCD01068963;AGCD01068964;AGCD01068965;AGCD01068966;AGCD01068967;XM_013507205 XP_013362659 MODEL 8725642 protein-coding Rgs7 regulator of G protein signaling 7 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH Experimental Seizures (ortholog); intellectual disability (ortholog); morphine dependence (ortholog); FOUND IN cell tip (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955406 10669127 11127564 + 102019356 AGCD01005869;AGCD01005870;AGCD01005871;AGCD01005872;AGCD01005873;AGCD01005874;AGCD01005875;AGCD01005876;AGCD01005877;AGCD01005878;AGCD01005879;AGCD01005880;AGCD01005881;AGCD01005882;GBCE01084812;GBCE01084814;XM_005374822;XM_005374823;XM_005374824;XM_005374825;XM_005374826;XM_013520541;XM_013520556 XP_005374879;XP_005374880;XP_005374881;XP_005374882;XP_005374883;XP_013375995;XP_013376010 MODEL 8711236 protein-coding Tulp1 TUB like protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN dendrite development (ortholog); detection of light stimulus involved in visual perception (ortholog); eye photoreceptor cell development (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH brachydactyly (ortholog); Eye Abnormalities (ortholog); fundus dystrophy (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955437 3405218 3417079 - 102012897 AGCD01034311;AGCD01034312;GBDF01075341;XM_013516916 XP_013372370 MODEL 8849641 protein-coding Atg13 autophagy related 13 ENCODES a protein that exhibits kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); mitophagy (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN autophagy pathway; mTOR signaling pathway; ASSOCIATED WITH Liver Reperfusion Injury (ortholog); prostate cancer (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955422 1398646 1432440 - 102004393 AGCD01022457;AGCD01022458;GBDF01084951;XM_005384010;XM_005384011;XM_005384012;XM_005384014;XM_005384015;XM_005384016;XM_005384018;XM_013514204;XM_013514205 XP_005384067;XP_005384068;XP_005384069;XP_005384071;XP_005384072;XP_005384073;XP_005384075;XP_013369658;XP_013369659 MODEL 8887681 protein-coding Arfgef2 ARF guanine nucleotide exchange factor 2 ENCODES a protein that exhibits GABA receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); myosin binding (ortholog); INVOLVED IN endomembrane system organization (ortholog); endosome organization (ortholog); exocytosis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN asymmetric synapse (ortholog); axonemal microtubule (ortholog); cytoplasmic vesicle (ortholog) NW_004955445 9069803 9153746 - 102008272 AGCD01039623;AGCD01039624;GBBH01065316;XM_005392338;XM_005392340 XP_005392395;XP_005392397 MODEL 8845504 pseudo LOC102005366 acyl-protein thioesterase 1 pseudogene NW_004955414 31575081 31575919 + 102005366 AGCD01015757 MODEL 8833033 protein-coding LOC102012609 ras-related protein Rap-1A NW_004955407 658498 659795 + 102012609 AGCD01006756;XM_005375497 XP_005375554 MODEL 39131387 protein-coding WFDC8 WAP four-disulfide core domain 8 8877743 protein-coding Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIv (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955406 23329400 23401282 - 102005222 AGCD01006171;GBDJ01317528;XM_005375059;XM_013521605 XP_005375116;XP_013377059 MODEL 39131559 protein-coding GHRH growth hormone releasing hormone 8734475 protein-coding Amhr2 anti-Mullerian hormone receptor type 2 ENCODES a protein that exhibits anti-Mullerian hormone receptor activity (ortholog); hormone binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); female gonad development (ortholog); male gonad development (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); dysgerminoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955458 693434 703026 + 102020884 AGCD01047148;GBDI01275831;XM_005397177;XM_013520957;XM_013520958;XM_013520959;XM_013520961;XM_013520962;XM_013520963;XM_013520964 XP_005397234;XP_013376411;XP_013376412;XP_013376413;XP_013376415;XP_013376416;XP_013376417;XP_013376418 MODEL 39134106 misc_rna 7SK 7SK RNA 8915716 pseudo LOC102021571 40S ribosomal protein SA-like NW_004955424 12719916 12720914 - 102021571 AGCD01024618 MODEL 8812521 protein-coding Tspan2 tetraspanin 2 INVOLVED IN astrocyte development (ortholog); axon development (ortholog); inflammatory response (ortholog); ASSOCIATED WITH stroke (ortholog); FOUND IN myelin sheath (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955435 18344320 18371248 - 102003689 AGCD01033403;GBCB01057093;XM_013516547;XM_013516548 XP_013372001;XP_013372002 MODEL 8874949 pseudo LOC102019797 mitochondrial fission factor pseudogene NW_004955414 25120858 25122118 + 102019797 AGCD01015576;XM_005380525 MODEL 8862732 protein-coding Dnm3 dynamin 3 ENCODES a protein that exhibits GTPase activity (ortholog); identical protein binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN endocytosis (ortholog); filopodium assembly (ortholog); negative regulation of dendritic spine morphogenesis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Kidney Neoplasms (ortholog); FOUND IN apical tubulobulbar complex (ortholog); axon (ortholog); basal tubulobulbar complex (ortholog) NW_004955406 12345483 12881182 + 102027808 AGCD01005915;AGCD01005916;AGCD01005917;AGCD01005918;AGCD01005919;AGCD01005920;AGCD01005921;AGCD01005922;AGCD01005923;AGCD01005924;AGCD01005925;AGCD01005926;AGCD01005927;AGCD01005928;GBDF01250245;XM_005374853;XM_005374854;XM_005374855;XM_005374856;XM_005374857 XP_005374910;XP_005374911;XP_005374912;XP_005374913;XP_005374914 MODEL 39133570 snrna U2 U2 spliceosomal RNA 8996811 pseudo LOC102024282 protein slowmo homolog 2 pseudogene NW_004955439 11396392 11398794 + 102024282 AGCD01035905;AGCD01035906 MODEL 10154021 protein-coding Ahnak2 AHNAK nucleoprotein 2 ASSOCIATED WITH cerebellar ataxia (ortholog); FOUND IN costamere (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955538 3305664 3315094 - 106147279 AGCD01071157;AGCD01071158;GBCQ01094345;GBDJ01075788;XM_013507883 XP_013363337 MODEL 9037713 protein-coding LOC102015189 olfactory receptor 52W1 NW_004955414 21944401 21945366 + 102015189 AGCD01015438;XM_005380116 XP_005380173 MODEL 8958452 ncrna LOC102010160 uncharacterized LOC102010160 NW_004955481 5183643 5195662 + 102010160 AGCD01056965;GBDF01117312;XR_263780;XR_263781 MODEL 10292752 ncrna LOC106150136 uncharacterized LOC106150136 NW_004955465 7001538 7077795 + 106150136 AGCD01050449;AGCD01050450;AGCD01050451;AGCD01050452;XR_001236765 MODEL 8770379 protein-coding Sgk3 serum/glucocorticoid regulated kinase family member 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); ASSOCIATED WITH hypotrichosis (ortholog); prostate cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955444 12385747 12501589 - 102013659 AGCD01039071;AGCD01039072;AGCD01039073;AGCD01039074;GBCQ01126883;XM_005392140;XM_005392141;XM_005392143;XM_013518177;XM_013518178 XP_005392197;XP_005392198;XP_005392200;XP_013373631;XP_013373632 MODEL 39131620 rrna 5S_rRNA 5S ribosomal RNA 8825473 protein-coding Cc2d1a coiled-coil and C2 domain containing 1A ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN apical dendrite arborization (ortholog); dendrite arborization (ortholog); endosome organization (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 3 (ortholog); ciliopathy (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); glutamatergic synapse (ortholog) NW_004955415 32667832 32682945 + 102006908 AGCD01016730;GBDF01085117;XM_005381071;XM_005381072;XM_013512196 XP_005381128;XP_005381129;XP_013367650 MODEL 39132199 rrna 5S_rRNA 5S ribosomal RNA 8705218 pseudo LOC102018215 60S ribosomal protein L7 pseudogene NW_004955521 4288386 4289394 - 102018215 AGCD01068259 MODEL 8731034 protein-coding Fat4 FAT atypical cadherin 4 INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cerebral cortex development (ortholog); condensed mesenchymal cell proliferation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); CAKUT (ortholog); cystic kidney disease (ortholog); FOUND IN apical part of cell (ortholog) NW_004955428 15621333 15812167 - 102016830 AGCD01028008;AGCD01028009;AGCD01028010;AGCD01028011;AGCD01028012;AGCD01028013;GBCE01020164;GBDJ01116049;XM_013515322 XP_013370776 MODEL 15036852 trna Trnan-auu transfer RNA asparagine (anticodon AUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978824 9017252 protein-coding Ptpra protein tyrosine phosphatase receptor type A ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); integrin-mediated signaling pathway (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH gastric adenocarcinoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN focal adhesion (ortholog); membrane (ortholog); receptor complex (ortholog) NW_004955415 13819934 13967068 + 102020110 AGCD01016269;AGCD01016270;AGCD01016271;AGCD01016272;AGCD01016273;AGCD01016274;AGCD01016275;AGCD01016276;AGCD01016277;AGCD01016278;GBCE01032562;XM_005380770;XM_005380771;XM_013512312;XM_013512313 XP_005380827;XP_005380828;XP_013367766;XP_013367767 MODEL 8706591 protein-coding Klf17 KLF transcription factor 17 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gamete generation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog) NW_004955537 3637825 3648078 + 102013338 AGCD01070970;AGCD01070971;GBDF01085578;XM_005410712 XP_005410769 MODEL 9020512 protein-coding Chordc1 cysteine and histidine rich domain containing 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN obsolete negative regulation of Rho-dependent protein serine/threonine kinase activity (ortholog); protein folding (ortholog); regulation of cellular response to heat (ortholog); ASSOCIATED WITH chronic myeloid leukemia (ortholog) NW_004955414 3699652 3717200 + 102030623 AGCD01014838;AGCD01014839;GBCE01099244;XM_005379722 XP_005379779 MODEL 8910583 protein-coding Ism2 isthmin 2 NW_004955438 1363508 1376968 - 102017058 AGCD01034980;AGCD01034981;GBBH01138785;GBDI01055261;XM_013517160 XP_013372614 MODEL 8889035 protein-coding Peg10 paternally expressed 10 This gene is thought to have been derived from the Ty3/Gypsy family of retrotransposons. It contains two overlapping open reading frames, RF1 and RF2, and expresses two proteins: a shorter, gag-like protein (with a CCHC-type zinc finger domain) from RF1; and a longer, gag/pol-like fusion protein (with an additional aspartic protease motif) from RF1/RF2 by -1 translational frameshifting (-1 FS). While -1 FS has been observed in RNA viruses and transposons in both prokaryotes and eukaryotes, this gene represents the first example of -1 FS in a eukaryotic cellular gene. This gene is highly conserved across mammalian species and retains the heptanucleotide (GGGAAAC) and pseudoknot elements required for -1 FS. It is expressed in adult and embryonic tissues (most notably in placenta) and reported to have a role in cell proliferation, differentiation, apoptosis and cancer development. Knockout mice lacking this gene showed early embryonic lethality with placental defects, indicating the importance of this gene in embryonic development. [provided by RefSeq, Oct 2014] NW_004955432 11383919 11395313 + 102014815 AGCD01030948;AGCD01030949;GBDF01052012;NM_001291250;NM_001291251 NP_001278179;NP_001278180 REVIEWED 39133846 misc_rna 7SK 7SK RNA 8987162 ncrna LOC102020075 uncharacterized LOC102020075 NW_004955451 16473682 16475747 + 102020075 AGCD01043679;GBDF01251827;XR_262617 MODEL 9006576 pseudo LOC102022585 N-alpha-acetyltransferase 50 pseudogene NW_004955468 4644545 4645075 + 102022585 AGCD01051919 MODEL 8974637 protein-coding Bok BCL2 family apoptosis regulator BOK ENCODES a protein that exhibits BH domain binding (ortholog); protein dimerization activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular component disassembly involved in execution phase of apoptosis (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN cis-Golgi network membrane (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) NW_004955542 224471 232401 - 102007278 AGCD01071464;GBCQ01010517;GBDI01072356;XM_005411124 XP_005411181 MODEL 8842271 protein-coding Pop5 POP5 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); tRNA processing (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955455 11069131 11071814 + 102008497 AGCD01045978;GBCE01034142;XM_005396499 XP_005396556 MODEL 39133351 snrna U4 U4 spliceosomal RNA 9002411 protein-coding Gpr149 G protein-coupled receptor 149 INVOLVED IN antral ovarian follicle growth (ortholog); negative regulation of ovulation (ortholog); preantral ovarian follicle growth (ortholog); ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog) NW_004955448 5682132 5749533 - 102013230 AGCD01041373;AGCD01041374;AGCD01041375;AGCD01041376;GBCQ01030993;XM_005393060 XP_005393117 MODEL 8819590 protein-coding LOC102010960 zinc finger protein 154-like NW_004955584 561048 567412 + 102010960 AGCD01075948;GBDF01281692;XM_005414367 XP_005414424 MODEL 8703293 protein-coding Rgs7bp regulator of G protein signaling 7 binding protein INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of postsynaptic membrane potential (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; FOUND IN axon (ortholog); cytoplasm (ortholog); dendritic shaft (ortholog) NW_004955446 4354689 4451269 - 102022648 AGCD01040034;AGCD01040035;AGCD01040036;AGCD01040037;GBDJ01301600;XM_005392636 XP_005392693 MODEL 8750141 protein-coding Tkt transketolase ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN D-xylulose 5-phosphate biosynthetic process (ortholog); glyceraldehyde-3-phosphate biosynthetic process (ortholog); pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); nuclear body (ortholog) NW_004955430 3178830 3193241 - 102029887 AGCD01029194;GBCE01001144;GBDF01082121;XM_005387366 XP_005387423 MODEL 8993315 protein-coding LOC102007174 cocaine esterase-like NW_004955767 9802 20242 - 102007174 AGCD01078309;AGCD01078310;GBDJ01038301;XM_005415102 XP_005415159 MODEL 8952999 protein-coding Fmo2 flavin containing dimethylaniline monoxygenase 2 ENCODES a protein that exhibits monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); NADP+ metabolic process (ortholog); negative regulation of fatty acid oxidation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN membrane (ortholog) NW_004955406 11851694 11875314 + 102021840 AGCD01005897;GBDK01012920;XM_005374831 XP_005374888 MODEL 8762009 pseudo LOC102005367 complement component 1 Q subcomponent-binding protein, mitochondrial pseudogene NW_004955414 29861056 29862411 - 102005367 AGCD01015717 MODEL 8879723 protein-coding Adgb androglobin INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); FOUND IN sperm annulus (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955439 14144056 14268983 - 102019108 AGCD01035972;AGCD01035973;GBDF01081438;XM_005390627;XM_013517404;XM_013517405;XM_013517406;XM_013517407 XP_005390684;XP_013372858;XP_013372859;XP_013372860;XP_013372861 MODEL 8805224 protein-coding Hhipl1 HHIP like 1 INVOLVED IN artery development (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); prostate cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955438 20936314 20951466 + 102017384 AGCD01035526;AGCD01035527;GBBH01126890;GBCE01175831;XM_013517245 XP_013372699 MODEL 8726211 protein-coding Aurka aurora kinase A ENCODES a protein that exhibits histone H3S10 kinase activity (ortholog); molecular function activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); centrosome cycle (ortholog); centrosome localization (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Neoplasms (ortholog); Chromosomal Instability (ortholog); FOUND IN axon hillock (ortholog); basolateral plasma membrane (ortholog); centrosome (ortholog) NW_004955445 2831073 2853151 + 102011371 AGCD01039369;GBDF01083611;XM_005392275;XM_013518333 XP_005392332;XP_013373787 MODEL 8956908 protein-coding Edf1 endothelial differentiation related factor 1 ENCODES a protein that exhibits TFIID-class transcription factor complex binding (ortholog); transcription coactivator activity (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955513 4942268 4945645 - 102025493 AGCD01066944;AGCD01066945;GBDF01170783;XM_005408560;XM_013506641 XP_005408617;XP_013362095 MODEL 8959720 protein-coding Hoxb5 homeobox B5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 12637229 12650261 + 102005987 AGCD01043417;GBCQ01010135;XM_005394239;XM_013519412 XP_005394296;XP_013374866 MODEL 9061676 pseudo LOC102017467 S-phase kinase-associated protein 1 pseudogene NW_004955422 16611196 16612201 - 102017467 AGCD01022898 MODEL 10118772 ncrna LOC106147164 uncharacterized LOC106147164 NW_004955524 2592259 2593048 - 106147164 AGCD01068823;GBDJ01164425;XR_001231943 MODEL 8797906 pseudo LOC102021572 10 kDa heat shock protein, mitochondrial pseudogene NW_004955424 22163915 22165511 + 102021572 AGCD01024935 MODEL 9067082 protein-coding LOC102019799 proline-rich protein 2-like NW_004955415 13940809 13946248 + 102019799 AGCD01016278;GBCB01033686;XM_005380769 XP_005380826 MODEL 8922641 protein-coding Trappc13 trafficking protein particle complex subunit 13 NW_004955446 3433675 3467539 - 102019448 AGCD01040017;AGCD01040018;GBDF01158421;XM_013518409;XM_013518410 XP_013373863;XP_013373864 MODEL 8992688 protein-coding Tspan3 tetraspanin 3 ASSOCIATED WITH colorectal cancer (ortholog) NW_004955450 1916067 1937364 - 102020506 AGCD01042371;GBCB01005521;XM_005393482 XP_005393539 MODEL 39132203 snrna U6 U6 spliceosomal RNA 9027818 protein-coding Dnmbp dynamin binding protein ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cilium assembly (ortholog); regulation of cell shape (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH cataract 48 (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955507 5801350 5876972 - 102018752 AGCD01065688;AGCD01065689;AGCD01065690;GBDF01159842;GBDF01159843;XM_013506228 XP_013361682 MODEL 8733773 protein-coding LOC102015192 methyl-CpG-binding domain protein 3 NW_004955472 2101649 2105184 - 102015192 AGCD01053435;GBCB01002272;GBCE01056293;XM_013522947 XP_013378401 MODEL 8821590 protein-coding LOC102022587 interleukin-36 beta NW_004955470 1261429 1274387 + 102022587 AGCD01052631;AGCD01052632;AGCD01052633;GBDI01161382;XM_005400590 XP_005400647 MODEL 9012073 protein-coding Ahr aryl hydrocarbon receptor ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); aryl hydrocarbon receptor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); blood circulation (ortholog); blood vessel development (ortholog); PARTICIPATES IN aryl hydrocarbon receptor signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); Adult Pancreatic Cancer (ortholog); alcohol dependence (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear aryl hydrocarbon receptor complex (ortholog) NW_004955410 20428531 20459482 + 102021949 AGCD01011045;GBBH01163343;XM_013510570 XP_013366024 MODEL 39131621 rrna 5S_rRNA 5S ribosomal RNA 9048317 protein-coding Sgms1 sphingomyelin synthase 1 ENCODES a protein that exhibits ceramide cholinephosphotransferase activity (ortholog); ceramide phosphoethanolamine synthase activity (ortholog); sphingomyelin synthase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH pulmonary edema (ortholog); FOUND IN Golgi membrane (ortholog); Golgi trans cisterna (ortholog); Golgi trans cisterna membrane (ortholog) NW_004955425 5507905 5819357 + 102030096 AGCD01025350;AGCD01025351;AGCD01025352;AGCD01025353;AGCD01025354;AGCD01025355;AGCD01025356;AGCD01025357;GBDI01187376;XM_005385896;XM_005385897;XM_013514835;XM_013514836;XM_013514837;XM_013514838;XM_013514839 XP_005385953;XP_005385954;XP_013370289;XP_013370290;XP_013370291;XP_013370292;XP_013370293 MODEL 39131448 protein-coding WFDC9 WAP four-disulfide core domain 9 9000234 protein-coding Ghrh growth hormone releasing hormone ENCODES a protein that exhibits growth hormone-releasing hormone activity (ortholog); growth hormone-releasing hormone receptor binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autoimmune polyendocrine syndrome type 1 (ortholog); breast cancer (ortholog); FOUND IN axon terminus (ortholog); extracellular space (ortholog); perikaryon (ortholog) NW_004955422 24481246 24490529 + 102016066 AGCD01023220;GBDF01097802;XM_013513839 XP_013369293 MODEL 9006042 pseudo LOC102003633 cohesin subunit SA-1 pseudogene NW_004955463 594311 597367 + 102003633 AGCD01049490 MODEL 8774501 protein-coding Fate1 fetal and adult testis expressed 1 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of mitochondrial calcium ion concentration (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog); mitochondrial outer membrane (ortholog) NW_004955498 7237494 7241447 + 102009078 AGCD01063146;GBDF01008492;XM_005406444 XP_005406501 MODEL 39134107 misc_rna 7SK 7SK RNA 39133377 snrna U4 U4 spliceosomal RNA 39133572 snrna U2 U2 spliceosomal RNA 8837936 protein-coding Sgms2 sphingomyelin synthase 2 ENCODES a protein that exhibits ceramide cholinephosphotransferase activity (ortholog); ceramide phosphoethanolamine synthase activity (ortholog); sphingomyelin synthase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide phosphoethanolamine biosynthetic process (ortholog); regulation of bone mineralization (ortholog); ASSOCIATED WITH calvarial doughnut lesions with bone fragility (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955496 1909347 1955004 - 102004618 AGCD01062261;GBCE01007641;XM_005406206;XM_005406207;XM_005406208;XM_005406209;XM_005406210;XM_005406211;XM_005406212;XM_013505416;XM_013505417 XP_005406263;XP_005406264;XP_005406265;XP_005406266;XP_005406267;XP_005406268;XP_005406269;XP_013360870;XP_013360871 MODEL 8898603 protein-coding Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ENCODES a protein that exhibits iron ion binding (ortholog); metal ion binding (ortholog); procollagen galactosyltransferase activity (ortholog); INVOLVED IN basement membrane assembly (ortholog); cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); ASSOCIATED WITH BCARD syndrome (ortholog); Cerebral Hemorrhage (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955456 16082424 16090773 + 102023777 AGCD01046689;GBDF01156007;XM_005396861;XM_005396862 XP_005396918;XP_005396919 MODEL 10255388 ncrna LOC106147165 uncharacterized LOC106147165 NW_004955524 2661951 2663691 - 106147165 AGCD01068827;AGCD01068828;GBBH01171560;XR_001231945 MODEL 8944742 protein-coding Bckdha branched chain keto acid dehydrogenase E1 subunit alpha ENCODES a protein that exhibits branched-chain 2-oxo acid dehydrogenase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); response to cAMP (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); mitochondrion (ortholog) NW_004955555 334253 357417 + 102017818 AGCD01073024;GBDF01080285;XM_005412348;XM_005412349 XP_005412405;XP_005412406 MODEL 8737569 pseudo LOC102010171 40S ribosomal protein SA pseudogene NW_004955421 22931886 22933055 - 102010171 AGCD01022164 MODEL 8872240 protein-coding Arfgef3 ARFGEF family member 3 ASSOCIATED WITH dystonia (ortholog); Febrile Seizures (ortholog); Neurodevelopmental Disorders (ortholog) NW_004955436 21220743 21366477 - 102018131 AGCD01034050;AGCD01034051;GBBH01150141;GBDF01075891;XM_013516654 XP_013372108 MODEL 8938220 ncrna LOC102012610 uncharacterized LOC102012610 NW_004955407 39310523 39313107 + 102012610 AGCD01007824;GBBH01151673;XR_259626 MODEL 8835420 protein-coding LOC102010962 small proline-rich protein 3-like NW_004955592 393237 394484 - 102010962 AGCD01076311;GBDI01016409;XM_005414615 XP_005414672 MODEL 39132200 rrna 5S_rRNA 5S ribosomal RNA 8857878 protein-coding LOC102018217 ubiquitin-conjugating enzyme E2 D2-like NW_004955525 1483494 1484306 + 102018217 AGCD01069039;XM_005409723;XM_005409724;XM_005409725 XP_005409780;XP_005409781;XP_005409782 MODEL 8978226 trna Trnan-guu transfer RNA asparagine (anticodon GUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978825 AGCD01028556;AGCD01030347;AGCD01043507;AGCD01049456;AGCD01052199;AGCD01062085;AGCD01080156 MODEL 8799799 protein-coding LOC102007175 translationally-controlled tumor protein-like NW_004957362 28 1515 - 102007175 AGCD01080758;XM_005415228 XP_005415285 MODEL 8890241 protein-coding Rgs8 regulator of G protein signaling 8 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled acetylcholine receptor signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); regulation of dopamine receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); dendrite (ortholog); neuronal cell body membrane (ortholog) NW_004955406 21482810 21523518 - 102018888 AGCD01006128;AGCD01006129;AGCD01006130;GBDF01058403;XM_005375009;XM_005375010;XM_005375011;XM_013521471;XM_013521476 XP_005375066;XP_005375067;XP_005375068;XP_013376925;XP_013376930 MODEL 9039430 protein-coding Amigo1 adhesion molecule with Ig like domain 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN axonal fasciculation (ortholog); axonogenesis (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); neuronal cell body membrane (ortholog) NW_004955435 12918270 12930362 - 102004746 AGCD01033174;GBDF01055408;GBDI01386202;XM_005388875;XM_005388878 XP_005388932;XP_005388935 MODEL 8991411 protein-coding Chp1 calcineurin like EF-hand protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); kinase binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); intracellular sodium ion homeostasis (ortholog); membrane docking (ortholog); ASSOCIATED WITH Spastic Ataxia 9, Autosomal Recessive (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi membrane (ortholog) NW_004955416 8090034 8131605 + 102004381 AGCD01017028;AGCD01017029;AGCD01017030;AGCD01017031;GBDF01003296;XM_013512484 XP_013367938 MODEL 9049961 protein-coding Peg3 paternally expressed 3 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Parasitic Liver Diseases (ortholog); FOUND IN autophagosome (ortholog); nucleus (ortholog) NW_004955567 85913 96236 + 102019214 AGCD01074378;AGCD01074379;AGCD01074380;GBBH01139572;GBCE01188438;XM_013509239 XP_013364693 MODEL 8958963 protein-coding Ptprb protein tyrosine phosphatase receptor type B ENCODES a protein that exhibits cadherin binding (ortholog); protein tyrosine phosphatase activity (ortholog); transmembrane receptor protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); dephosphorylation (ortholog); glial cell migration (ortholog); ASSOCIATED WITH angiosarcoma (ortholog); brain glioma (ortholog); breast angiosarcoma (ortholog); FOUND IN receptor complex (ortholog) NW_004955405 10647777 10766909 - 102028492 AGCD01004816;AGCD01004817;AGCD01004818;AGCD01004819;AGCD01004820;AGCD01004821;AGCD01004822;GBDK01004065;XM_005374311;XM_005374312 XP_005374368;XP_005374369 MODEL 8900586 trna Trnap-agg transfer RNA proline (anticodon AGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978806 AGCD01015187;AGCD01037806;AGCD01049336;AGCD01056483;AGCD01057606;AGCD01072566 MODEL 8839333 ncrna LOC102024285 uncharacterized LOC102024285 NW_004955441 15676243 15697570 + 102024285 AGCD01037251;GBCB01089296;XR_001235297;XR_262085;XR_262086;XR_262087 MODEL 8937977 protein-coding Adgra1 adhesion G protein-coupled receptor A1 FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955477 10721635 10761357 + 102028188 AGCD01055706;GBDF01186692;XM_005402051;XM_005402052 XP_005402108;XP_005402109 MODEL 8879248 protein-coding Tulp2 TUB like protein 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog) NW_004955559 1740750 1749036 + 102029336 AGCD01073664;AGCD01073665;GBDF01006508;XM_013509033;XM_013509034;XM_013509035 XP_013364487;XP_013364488;XP_013364489 MODEL 39133352 snrna U4 U4 spliceosomal RNA 8930060 protein-coding Atg14 autophagy related 14 ENCODES a protein that exhibits GTPase binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); autophagosome membrane docking (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN autophagosome (ortholog); axoneme (ortholog); extrinsic component of omegasome membrane (ortholog) NW_004955466 13898311 13972506 + 102010683 AGCD01051190;AGCD01051191;AGCD01051192;AGCD01051193;AGCD01051194;AGCD01051195;AGCD01051196;AGCD01051197;GBDJ01000759;XM_013521995 XP_013377449 MODEL 9040518 pseudo LOC102019801 KDEL motif-containing protein 2 pseudogene NW_004955415 5789037 5790513 - 102019801 AGCD01016001 MODEL 9043870 protein-coding Pop7 POP7 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog); nucleolus (ortholog); ribonuclease MRP complex (ortholog) NW_004955573 217809 218915 - 102014095 AGCD01074968;GBDJ01353728;XM_005413692;XM_005413693 XP_005413749;XP_005413750 MODEL 9017736 protein-coding Cc2d1b coiled-coil and C2 domain containing 1B ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); nucleoplasm (ortholog) NW_004955464 6792456 6805284 + 102019151 AGCD01050039;GBDK01002298;XM_013521614;XM_013521615;XM_013521616;XM_013521617 XP_013377068;XP_013377069;XP_013377070;XP_013377071 MODEL 8878886 protein-coding Gpr15 G protein-coupled receptor 15 ENCODES a protein that exhibits coreceptor activity (ortholog); G protein-coupled receptor activity (ortholog); virus receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); symbiont entry into host cell (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); plasma membrane (ortholog) NW_004955427 115513 137557 + 102015745 AGCD01026808;GBDF01166895;XM_005386275;XM_005386277;XR_001234404;XR_001234405 XP_005386332;XP_005386334 MODEL 10100602 protein-coding LOC106147166 microtubule-associated protein 1S-like NW_004955524 703117 704207 - 106147166 AGCD01068694;GBCE01098302;GBCQ01123891;XM_013507234 XP_013362688 MODEL 9045561 protein-coding Plp1 proteolipid protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); structural constituent of myelin sheath (ortholog); INVOLVED IN AMPA selective glutamate receptor signaling pathway (ortholog); astrocyte development (ortholog); axon development (ortholog); ASSOCIATED WITH Chronic Relapsing Experimental Autoimmune Encephalomyelitis (ortholog); epilepsy (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN integrin alphav-beta3 complex (ortholog); myelin sheath (ortholog); plasma membrane (ortholog) NW_004955548 781522 797246 + 102028341 AGCD01072341;GBDK01179399;XM_005411997;XM_005411998 XP_005412054;XP_005412055 MODEL 8911630 protein-coding LOC102022588 olfactory receptor 51G2-like NW_004955414 20645409 20646350 + 102022588 AGCD01015385;XM_005380064 XP_005380121 MODEL 9066741 protein-coding Isoc1 isochorismatase domain containing 1 FOUND IN peroxisome (ortholog) NW_004955415 2091857 2110313 + 102024002 AGCD01015892;GBCQ01164120;GBDF01155768;XM_013512393 XP_013367847 MODEL 9066356 protein-coding Fmo4 flavin containing dimethylaniline monoxygenase 4 INVOLVED IN energy homeostasis (ortholog); negative regulation of fatty acid oxidation (ortholog); xenobiotic catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); trimethylaminuria (ortholog) NW_004955406 11967045 11987105 + 102019569 AGCD01005900;GBCQ01059459;XM_013520621;XM_013520625 XP_013376075;XP_013376079 MODEL 39133847 misc_rna 7SK 7SK RNA 8707675 ncrna LOC102003635 uncharacterized LOC102003635 NW_004955412 994166 1000278 + 102003635 AGCD01012505;GBDF01113084;XR_259960 MODEL 9023047 protein-coding Ghrhr growth hormone releasing hormone receptor ENCODES a protein that exhibits growth factor binding (ortholog); growth hormone-releasing hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH disorder of sexual development (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955410 32084210 32114844 + 102023563 AGCD01011335;GBCQ01127742;XM_005377509;XM_005377510;XM_005377511 XP_005377566;XP_005377567;XP_005377568 MODEL 10337110 ncrna LOC106150137 uncharacterized LOC106150137 NW_004955465 3881818 3882578 - 106150137 AGCD01050394;GBDJ01384243;XR_001236766 MODEL 8736602 protein-coding Bola1 bolA family member 1 FOUND IN mitochondrion (ortholog) NW_004955413 850781 851887 - 102022579 AGCD01013491;GBCE01167501;XM_005378710 XP_005378767 MODEL 8815284 pseudo LOC102021576 39S ribosomal protein L32, mitochondrial pseudogene NW_004955426 18028126 18029000 + 102021576 AGCD01026510 MODEL 39133378 snrna U4 U4 spliceosomal RNA 9029485 protein-coding Amigo2 adhesion molecule with Ig like domain 2 INVOLVED IN cerebellum development (ortholog); heterophilic cell-cell adhesion (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); gastric adenocarcinoma (ortholog); melanoma (ortholog) NW_004955500 6134736 6138075 - 102013948 AGCD01063871;GBDF01253270;GBDK01142053;XM_005406602 XP_005406659 MODEL 8866196 trna Trnap-cgg transfer RNA proline (anticodon CGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955467;NW_004955442;NW_004955465;NW_004955462 8707836;14202081;13093914;9311560 8707907;14202152;13093985;9311631 +;+;+;- 101978809 AGCD01037806;AGCD01049336;AGCD01050584;AGCD01051466 MODEL 8716438 protein-coding Dnmt1 DNA methyltransferase 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA (cytosine-5-)-methyltransferase activity (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to bisphenol A (ortholog); cellular response to lead ion (ortholog); PARTICIPATES IN DNA modification pathway; glycine N-methyltransferase deficiency pathway; homocysteine metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); alopecia areata (ortholog); FOUND IN heterochromatin (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955495 1465529 1505379 - 102028310 AGCD01061693;AGCD01061694;AGCD01061695;GBDF01053790;XM_005405582;XM_005405583;XM_013505316;XM_013505317 XP_005405639;XP_005405640;XP_013360770;XP_013360771 MODEL 8747049 protein-coding LOC102015193 uncharacterized LOC102015193 NW_004955474 8565715 8574633 - 102015193 AGCD01054555;GBDK01388404;XM_005401422;XM_013523091 XP_005401479;XP_013378545 MODEL 9046842 protein-coding Ahrr aryl-hydrocarbon receptor repressor INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nitric oxide metabolic process (ortholog); ASSOCIATED WITH hypertension (ortholog); Prenatal Exposure Delayed Effects (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955504 121739 191871 + 102019620 AGCD01064816;GBDJ01054828;XM_005406993;XM_005406995;XM_013505865 XP_005407050;XP_005407052;XP_013361319 MODEL 9006919 protein-coding Klf3 KLF transcription factor 3 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to endothelin (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955443 8526371 8549510 - 102004983 AGCD01038328;GBCE01097434;XM_005391998;XM_005391999;XM_005392000;XM_005392001;XM_005392002 XP_005392055;XP_005392056;XP_005392057;XP_005392058;XP_005392059 MODEL 9014578 protein-coding LOC102005368 translation initiation factor IF-2-like NW_004955472 12291264 12293311 + 102005368 AGCD01053791;AGCD01053792;GBBH01193885;GBDJ01318455;XM_013523032 XP_013378486 MODEL 8727496 ncrna LOC102010963 uncharacterized LOC102010963 NW_004955450 6116015 6122123 - 102010963 AGCD01042519;GBDF01296262;XR_262533 MODEL 9053578 protein-coding LOC102018220 butyrophilin subfamily 1 member A1-like NW_004955437 999109 1050071 - 102018220 AGCD01034182;AGCD01034183;AGCD01034184;AGCD01034185;AGCD01034186;AGCD01034187;GBCQ01003449;XM_005389445 XP_005389502 MODEL 39134108 misc_rna 7SK 7SK RNA 8805946 protein-coding Aurkaip1 aurora kinase A interacting protein 1 INVOLVED IN positive regulation of proteolysis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955486 9437511 9438945 + 102022196 AGCD01059185;GBBH01091603;XM_005404225;XM_005404226;XM_005404227;XM_005404228 XP_005404282;XP_005404283;XP_005404284;XP_005404285 MODEL 9006514 ncrna LOC102017469 uncharacterized LOC102017469 NW_004955423 5629973 5705628 + 102017469 AGCD01023565;AGCD01023566;GBDF01221637;XR_260957 MODEL 9023268 protein-coding Hhipl2 HHIP like 2 NW_004955520 1926220 1942928 + 102003370 AGCD01068069;XM_005409283 XP_005409340 MODEL 8839633 protein-coding Hoxb6 homeobox B6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 12637221 12645749 + 102005332 AGCD01043417;GBDJ01011544;XM_005394238;XR_262598 XP_005394295 MODEL 9065833 protein-coding Edil3 EGF like and discoidin domains 3 INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH osteoarthritis (ortholog) NW_004955418 26391309 26680553 + 102004165 AGCD01019394;AGCD01019395;AGCD01019396;AGCD01019397;AGCD01019398;GBBH01020972;XM_013513061 XP_013368515 MODEL 8911275 protein-coding Trappc14 trafficking protein particle complex subunit 14 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH primary autosomal recessive microcephaly 25 (ortholog); FOUND IN centriolar satellite (ortholog); midbody (ortholog); mitotic spindle (ortholog) NW_004955573 644907 649363 + 102011708 AGCD01074995;AGCD01074996;GBCE01135187;XM_013509467 XP_013364921 MODEL 39133573 snrna U2 U2 spliceosomal RNA 8788406 protein-coding Tspan31 tetraspanin 31 ASSOCIATED WITH familial melanoma (ortholog); Hereditary Neoplastic Syndromes (ortholog) NW_004955458 5455012 5457912 + 102010452 AGCD01047493;GBDI01358535;XM_005397412 XP_005397469 MODEL 8908293 protein-coding Sgo1 shugoshin 1 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); centriole-centriole cohesion (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); chronic atrial and intestinal dysrhythmia (ortholog); Chronobiology Disorders (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955430 12200601 12216845 - 102006155 AGCD01029489;AGCD01029490;GBDF01279460;XM_005387467;XM_005387468;XM_013515668;XM_013515669 XP_005387524;XP_005387525;XP_013371122;XP_013371123 MODEL 8894119 protein-coding Tulp3 TUB like protein 3 ENCODES a protein that exhibits enzyme binding (ortholog); G protein-coupled receptor binding (ortholog); intraciliary transport particle A binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); brain development (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); HEPATORENOCARDIAC DEGENERATIVE FIBROSIS (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axoneme (ortholog); ciliary base (ortholog) NW_004955429 18424912 18484522 + 102025605 AGCD01028906;AGCD01028907;AGCD01028908;AGCD01028909;AGCD01028910;AGCD01028911;AGCD01028912;GBDJ01235660;XM_013515477;XM_013515478 XP_013370931;XP_013370932 MODEL 8728142 protein-coding Bckdhb branched chain keto acid dehydrogenase E1 subunit beta ENCODES a protein that exhibits branched-chain 2-oxo acid dehydrogenase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); response to cAMP (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); maple syrup urine disease (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); mitochondrion (ortholog) NW_004955411 8427875 8626564 + 102008389 AGCD01011729;AGCD01011730;AGCD01011731;AGCD01011732;GBBH01117792;GBDK01235567;XM_005377677 XP_005377734 MODEL 8876732 ncrna LOC102019806 uncharacterized LOC102019806 NW_004955419 693667 706979 - 102019806 AGCD01019604;AGCD01019605;AGCD01019606;GBDI01249903;XR_001233563;XR_260595 MODEL 15036847 trna Trnap-ggg transfer RNA proline (anticodon GGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978807 8978036 protein-coding Arfip1 ARF interacting protein 1 ENCODES a protein that exhibits phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); negative regulation of retrograde transport, endosome to Golgi (ortholog); regulation of protein secretion (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955471 7238456 7349767 + 102027064 AGCD01053143;AGCD01053144;AGCD01053145;AGCD01053146;GBBH01141131;XM_005400902;XM_005400903;XM_005400905;XM_005400906 XP_005400959;XP_005400960;XP_005400962;XP_005400963 MODEL 8993034 protein-coding Popdc1 popeye domain cAMP effector 1 ENCODES a protein that exhibits cAMP binding (ortholog); structural molecule activity (ortholog); INVOLVED IN cell migration involved in heart development (ortholog); epithelial cell-cell adhesion (ortholog); heart development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2X (ortholog); genetic disease (ortholog); limb-girdle muscular dystrophy (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell junction (ortholog) NW_004955411 30517917 30548424 - 102030054 AGCD01012257;AGCD01012258;GBCB01000928;GBDF01087341;XM_013510787 XP_013366241 MODEL 8945673 protein-coding Atg16l1 autophagy related 16 like 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); axonal transport (ortholog); C-terminal protein lipidation (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Crohn's disease (ortholog); inflammatory bowel disease (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) NW_004955453 2884497 2917581 - 102010331 AGCD01044645;GBBH01208300;XM_005395353;XM_005395354;XM_005395355 XP_005395410;XP_005395411;XP_005395412 MODEL 8809352 protein-coding Cc2d2a coiled-coil and C2 domain containing 2A INVOLVED IN axoneme assembly (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH anencephaly (ortholog); brain disease (ortholog); ciliopathy (ortholog); FOUND IN ciliary transition zone (ortholog); MKS complex (ortholog) NW_004955480 8404239 8514792 - 102017335 AGCD01056722;AGCD01056723;AGCD01056724;AGCD01056725;AGCD01056726;AGCD01056727;GBBH01188254;GBCE01065243;XM_005402527 XP_005402584 MODEL 8813947 protein-coding Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); FOUND IN extracellular region (ortholog) NW_004955442 16573094 16577650 - 102024168 AGCD01037901;GBDK01343854;XM_005391633 XP_005391690 MODEL 8868490 protein-coding Gpr150 G protein-coupled receptor 150 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Ovarian Neoplasms (ortholog) NW_004955418 16942505 16945580 - 102029294 AGCD01019138;AGCD01019139;GBCE01038451;XM_005382348 XP_005382405 MODEL 8971979 ncrna LOC102022592 uncharacterized LOC102022592 NW_004955415 28798790 28804171 - 102022592 AGCD01016645;XR_260321 MODEL 8810005 protein-coding Fau FAU ubiquitin like and ribosomal protein S30 fusion ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-positive bacterium (ortholog); innate immune response in mucosa (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955422 20078393 20080855 + 102015964 AGCD01023064;GBDF01010504;XM_005384514 XP_005384571 MODEL 9060585 protein-coding Ptprc protein tyrosine phosphatase receptor type C ENCODES a protein that exhibits ankyrin binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); genetic disease (ortholog); FOUND IN bleb (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955406 35005577 35127395 + 102002992 AGCD01006516;AGCD01006517;GBDI01007524;XM_013521946;XM_013521949;XM_013521953;XM_013521962;XM_013521970;XM_013521971 XP_013377400;XP_013377403;XP_013377407;XP_013377416;XP_013377424;XP_013377425 MODEL 9049103 protein-coding Peli1 pellino E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN negative regulation of necroptotic process (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); negative regulation of T cell activation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); colorectal cancer (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 20212077 20263761 + 102009519 AGCD01024846;AGCD01024847;GBDF01191004;XM_005385703;XM_005385704 XP_005385760;XP_005385761 MODEL 8873695 ncrna LOC102010965 uncharacterized LOC102010965 NW_004955403 1991898 2019275 + 102010965 AGCD01001728;GBDF01163403;XR_001233151;XR_259135 MODEL 10323363 ncrna LOC106150138 uncharacterized LOC106150138 NW_004955465 2850426 2855300 + 106150138 AGCD01050363;GBBH01182784;XR_001236767 MODEL 39133353 snrna U4 U4 spliceosomal RNA 8726326 protein-coding Bola2b bolA family member 2B INVOLVED IN [2Fe-2S] cluster assembly (ortholog); cell redox homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955493 6812208 6812932 + 102020575 AGCD01061141;GBDF01002632;XM_005405183 XP_005405240 MODEL 8926926 protein-coding Ghrl ghrelin and obestatin prepropeptide ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); ghrelin receptor binding (ortholog); growth hormone-releasing hormone activity (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); adult feeding behavior (ortholog); decidualization (ortholog); PARTICIPATES IN ghrelin system pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); bone resorption disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955561 1676475 1682205 - 102018995 AGCD01073861;GBDK01306493;XM_005413069;XM_013509094 XP_005413126;XP_013364548 MODEL 8872834 protein-coding Adgra2 adhesion G protein-coupled receptor A2 INVOLVED IN angiogenesis (ortholog); canonical Wnt signaling pathway (ortholog); central nervous system development (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); Wnt signalosome (ortholog) NW_004955463 13514065 13549806 + 102011097 AGCD01049870;AGCD01049871;GBCE01052141;GBCQ01177598;XM_005398475 XP_005398532 MODEL 39132202 rrna 5S_rRNA 5S ribosomal RNA 39133575 snrna U2 U2 spliceosomal RNA 8940429 protein-coding LOC102020076 beta-defensin 109-like NW_004955403 53431655 53431963 + 102020076 AGCD01003056;XM_005373910 XP_005373967 MODEL 8888205 protein-coding Chp2 calcineurin like EF-hand protein 2 ENCODES a protein that exhibits calcium ion binding (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955493 2278494 2281125 + 102015021 AGCD01060943;GBCE01072558;GBDF01158981;XM_005405340 XP_005405397 MODEL 8903301 protein-coding Rgs9 regulator of G protein signaling 9 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN dark adaptation (ortholog); G protein-coupled dopamine receptor signaling pathway (ortholog); light adaption (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH bradyopsia (ortholog); bradyopsia 1 (ortholog); Drug-Induced Dyskinesia (ortholog); FOUND IN glutamatergic synapse (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) NW_004955478 4614730 4683152 + 102004811 AGCD01055853;AGCD01055854;AGCD01055855;GBDF01291760;XM_005402137 XP_005402194 MODEL 8964247 pseudo LOC102018222 ribulose-phosphate 3-epimerase-like NW_004955537 2568245 2569307 - 102018222 AGCD01070931 MODEL 39132205 snrna U6 U6 spliceosomal RNA 8911419 protein-coding Fmo5 flavin containing dimethylaniline monoxygenase 5 ENCODES a protein that exhibits monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN regulation of cholesterol metabolic process (ortholog); xenobiotic metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955568 1225136 1247352 + 102016533 AGCD01074543;GBDK01240451;XM_005413472;XM_005413473 XP_005413529;XP_005413530 MODEL 8894167 protein-coding Tktl1 transketolase like 1 FOUND IN cytosol (ortholog) NW_004955580 829653 851422 + 102027129 AGCD01075625;AGCD01075626;GBDF01008565;XM_005414185 XP_005414242 MODEL 8913195 ncrna LOC102003638 uncharacterized LOC102003638 NW_004955466 11978002 12017214 - 102003638 AGCD01051106;AGCD01051107;GBDI01272836;XR_001236797;XR_001236798;XR_001236799;XR_001236800;XR_001236801;XR_263316;XR_263317 MODEL 8999270 protein-coding Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955451 10976748 10982482 - 102029352 AGCD01043338;GBCB01111308;XM_005394122 XP_005394179 MODEL 8988118 protein-coding Hhla1 HHLA1 neighbor of OC90 NW_004955461 6738022 6774493 - 102003002 AGCD01048911;XM_005398071 XP_005398128 MODEL 8760078 protein-coding Aurkb aurora kinase B ENCODES a protein that exhibits histone H1-4S27 kinase activity (ortholog); histone H3S28 kinase activity (ortholog); kinase binding (ortholog); INVOLVED IN cell cycle G2/M phase transition (ortholog); cellular response to UV (ortholog); cleavage furrow formation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); endometrial carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome (ortholog) NW_004955467 8715387 8720889 + 102022269 AGCD01051466;GBDF01045906;XM_005399426;XM_005399427;XM_013522019;XM_013522020;XM_013522021 XP_005399483;XP_005399484;XP_013377473;XP_013377474;XP_013377475 MODEL 8821925 pseudo LOC102012616 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like NW_004955410 34241134 34241470 - 102012616 AGCD01011399 MODEL 8853375 pseudo LOC102007176 uncharacterized LOC102007176 NW_004955403 21438343 21464628 - 102007176 AGCD01002196 MODEL 8754963 protein-coding Ptprcap protein tyrosine phosphatase receptor type C associated protein FOUND IN plasma membrane (ortholog) NW_004955422 18041094 18043687 + 102017463 AGCD01022936;GBDK01171715;XM_005384326 XP_005384383 MODEL 10218004 ncrna LOC106147167 uncharacterized LOC106147167 NW_004955408 36719493 36826754 + 106147167 AGCD01008986;AGCD01008987;AGCD01008988;AGCD01008989;GBCE01172684;XR_001231948 MODEL 8962065 pseudo LOC102015195 proteasome subunit alpha type-1-like NW_004955415 32528920 32529748 + 102015195 AGCD01016725 MODEL 8942963 protein-coding Plp2 proteolipid protein 2 ENCODES a protein that exhibits chemokine binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955543 658617 662441 + 102009544 AGCD01071597;AGCD01071598;GBDK01020755;GBDK01020756;XM_005411327 XP_005411384 MODEL 8855920 protein-coding Sgo2 shugoshin 2 INVOLVED IN female meiotic nuclear division (ortholog); intracellular protein localization (ortholog); male meiotic nuclear division (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) NW_004955403 879354 905605 - 102005871 AGCD01001709;AGCD01001710;AGCD01001711;GBDF01051842;XM_005373247;XM_005373248;XM_013511911 XP_005373304;XP_005373305;XP_013367365 MODEL 8950567 protein-coding Dnmt3a DNA methyltransferase 3 alpha ENCODES a protein that exhibits chromatin binding (ortholog); DNA (cytosine-5-)-methyltransferase activity (ortholog); DNA binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to bisphenol A (ortholog); PARTICIPATES IN DNA modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute monocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN chromosome, centromeric region (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955469 7264431 7367059 - 102004469 AGCD01052412;AGCD01052413;AGCD01052414;AGCD01052415;GBDI01186606;XM_005400401;XM_005400403;XM_005400405;XM_005400406;XM_005400407;XM_005400409;XM_013522621;XM_013522623;XM_013522624 XP_005400458;XP_005400460;XP_005400462;XP_005400463;XP_005400464;XP_005400466;XP_013378075;XP_013378077;XP_013378078 MODEL 9034946 protein-coding Klf4 KLF transcription factor 4 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell differentiation (ortholog); cellular response to endothelin (ortholog); ASSOCIATED WITH Carotid Artery Injuries (ortholog); Congenital Abnormalities (ortholog); congenital heart disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955419 19280311 19284097 + 102023154 AGCD01020198;GBBH01064662;GBDI01182816;XM_005382762 XP_005382819 MODEL 8760599 protein-coding Ahsa1 activator of HSP90 ATPase activity 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); Hsp90 protein binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN maintenance of unfolded protein (ortholog); positive regulation of ATP-dependent activity (ortholog); FOUND IN cytosol (ortholog) NW_004955438 1351475 1359351 + 102016198 AGCD01034980;GBDF01261909;XM_005390201 XP_005390258 MODEL 8946276 ncrna LOC102005374 uncharacterized LOC102005374 NW_004955479 2013640 2022532 + 102005374 AGCD01056260;GBDF01098004;XR_263728 MODEL 8767225 protein-coding Isoc2 isochorismatase domain containing 2 INVOLVED IN protein destabilization (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955567 829799 835322 + 102020389 AGCD01074436;GBDJ01008095;XM_005413312;XM_013509304 XP_005413369;XP_013364758 MODEL 8705466 pseudo LOC102024286 olfactory receptor 11G2-like NW_004955550 750775 751537 + 102024286 AGCD01072520 MODEL 39131622 rrna 5S_rRNA 5S ribosomal RNA 8743577 protein-coding LOC102010175 sulfotransferase 1A1-like NW_004955493 6792319 6795493 - 102010175 AGCD01061139;AGCD01061140;GBCQ01097961;GBCQ01097964;XM_013504817 XP_013360271 MODEL 8862637 ncrna LOC102021581 uncharacterized LOC102021581 NW_004955506 2880718 2891543 + 102021581 AGCD01065304;GBCB01073532;XR_264339 MODEL 8818161 protein-coding Atg16l2 autophagy related 16 like 2 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); cytosol (ortholog) NW_004955414 18600904 18618048 - 102019160 AGCD01015285;GBDK01416285;XM_013511846;XM_013511847;XM_013511848;XM_013511849;XM_013511850;XR_001233128 XP_013367300;XP_013367301;XP_013367302;XP_013367303;XP_013367304 MODEL 8923470 protein-coding Gpr151 G protein-coupled receptor 151 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of synaptic vesicle exocytosis (ortholog); response to acidic pH (ortholog); ASSOCIATED WITH essential tremor (ortholog); FOUND IN cholinergic synapse (ortholog); presynaptic membrane (ortholog); synaptic vesicle membrane (ortholog) NW_004955415 7592958 7596586 + 102014238 AGCD01016046;XM_005380667 XP_005380724 MODEL 8801481 protein-coding Faxc failed axon connections homolog, metaxin like GST domain containing ASSOCIATED WITH prostate cancer (ortholog) NW_004955411 25154311 25220334 - 102022895 AGCD01012149;GBDF01089762;XM_005377800 XP_005377857 MODEL 9005647 protein-coding Edn1 endothelin 1 ENCODES a protein that exhibits cytokine activity (ortholog); endothelin A receptor binding (ortholog); endothelin B receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); artery smooth muscle contraction (ortholog); axon extension (ortholog); PARTICIPATES IN endothelin signaling pathway; hypoxia inducible factor pathway; inflammatory response pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN basal part of cell (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955465 2287906 2314945 - 102016360 AGCD01050349;AGCD01050350;GBCQ01058513;XM_005398820 XP_005398877 MODEL 8828474 protein-coding Peli2 pellino E3 ubiquitin protein ligase family member 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); positive regulation of protein phosphorylation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955466 10228101 10335129 + 102022065 AGCD01051062;AGCD01051063;AGCD01051064;GBDF01158128;XM_005399193 XP_005399250 MODEL 8789487 protein-coding Trappc2 trafficking protein particle complex subunit 2 ENCODES a protein that exhibits transcription corepressor binding (ortholog); transcription regulator inhibitor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); skeletal system development (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteochondrodysplasia (ortholog); spondyloepiphyseal dysplasia congenita (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear outer membrane (ortholog); nucleus (ortholog) NW_004955519 4470906 4485969 + 102024944 AGCD01067983;GBDK01393820;XM_005409200 XP_005409257 MODEL 8893738 protein-coding Tspan32 tetraspanin 32 INVOLVED IN blood coagulation (ortholog); cytoskeleton organization (ortholog); defense response to protozoan (ortholog); FOUND IN cell surface (ortholog); integrin alphaIIb-beta3 complex (ortholog) NW_004955422 14101833 14121784 + 102008544 AGCD01022852;GBDK01393243;XM_005384201;XM_005384202 XP_005384258;XP_005384259 MODEL 9001694 protein-coding Amigo3 adhesion molecule with Ig like domain 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN heterophilic cell-cell adhesion (ortholog); negative regulation of neuron projection development (ortholog); nervous system development (ortholog); ASSOCIATED WITH Optic Nerve Injuries (ortholog); sciatic neuropathy (ortholog); Spinal Cord Compression (ortholog) NW_004955532 1618659 1621706 - 102015887 AGCD01070196;GBDF01281705;XM_005410208 XP_005410265 MODEL 10211062 ncrna LOC106150139 uncharacterized LOC106150139 NW_004955466 11341205 11348620 + 106150139 AGCD01051087;XR_001236771 MODEL 9029607 protein-coding Wfs1 wolframin ER transmembrane glycoprotein ENCODES a protein that exhibits ATPase binding (ortholog); calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH Auditory Neuropathy (ortholog); autistic disorder (ortholog); autosomal dominant nonsyndromic deafness (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); secretory granule (ortholog) NW_004955514 3902508 3924281 - 102020042 AGCD01067119;AGCD01067120;AGCD01067121;GBCB01055926;GBDK01133953;XM_013506848 XP_013362302 MODEL 8906806 protein-coding Bckdk branched chain keto acid dehydrogenase kinase ENCODES a protein that exhibits [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity (ortholog); ATP binding (ortholog); protein kinase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); L-isoleucine catabolic process (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN valine, leucine and isoleucine degradation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); branched-chain keto acid dehydrogenase kinase deficiency (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) NW_004955493 7940358 7946317 + 102028429 AGCD01061242;AGCD01061243;GBDF01000930;GBDK01069971;XM_005405298 XP_005405355 MODEL 39133848 misc_rna 7SK 7SK RNA 9037393 trna Trnap-ugg transfer RNA proline (anticodon UGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955530;NW_004955449;NW_004955414;NW_004955442;NW_004955550 133690;1433235;15652077;14208532;1505328 133761;1433306;15652148;14208603;1505399 +;+;+;-;+ 101978808 AGCD01015187;AGCD01037806;AGCD01041800;AGCD01069830;AGCD01072578 MODEL 8739765 protein-coding Arfip2 ARF interacting protein 2 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); identical protein binding (ortholog); membrane curvature sensor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); mitophagy (ortholog); protein localization to phagophore assembly site (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; FOUND IN cell cortex (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955414 22209515 22214353 - 102023461 AGCD01015449;GBDI01078369;XM_005380149;XM_005380151;XM_013511831 XP_005380206;XP_005380208;XP_013367285 MODEL 8851962 pseudo LOC102017472 DCN1-like protein 4 pseudogene NW_004955495 2539564 2541310 + 102017472 AGCD01061781 MODEL 8914346 protein-coding Popdc2 popeye domain cAMP effector 2 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN regulation of heart rate (ortholog); regulation of membrane potential (ortholog); sinoatrial node cell development (ortholog); ASSOCIATED WITH Cardiac Conduction Disease with or without Dilated Cardiomyopathy 2 (ortholog); FOUND IN membrane (ortholog); sarcolemma (ortholog) NW_004955427 19347880 19367759 - 102020590 AGCD01027365;GBCB01073022;XM_005386452;XM_005386453;XM_013515175 XP_005386509;XP_005386510;XP_013370629 MODEL 39133379 snrna U4 U4 spliceosomal RNA 8802023 protein-coding Hoxb7 homeobox B7 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic organ development (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); invasive ductal carcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955451 12630276 12634641 + 102006856 AGCD01043417;GBDF01039539;XM_005394241 XP_005394298 MODEL 9007053 protein-coding LOC102010966 uncharacterized LOC102010966 NW_004955450 12785559 12807014 + 102010966 AGCD01042708;AGCD01042709;GBDJ01327161;XM_013518835 XP_013374289 MODEL 8736827 protein-coding Fmod fibromodulin INVOLVED IN odontogenesis of dentin-containing tooth (ortholog); skin development (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); gingivitis (ortholog); periodontitis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955406 39328743 39340113 - 102012279 AGCD01006626;AGCD01006627;GBDI01178831;XM_005375266 XP_005375323 MODEL 9038430 protein-coding Tktl2 transketolase like 2 FOUND IN cytoplasm (ortholog) NW_004955403 41526329 41528591 + 102015167 AGCD01002723;GBDK01218247;XM_013515256 XP_013370710 MODEL 8897070 protein-coding Bola3 bolA family member 3 INVOLVED IN adaptive thermogenesis (ortholog); energy homeostasis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); multiple mitochondrial dysfunctions syndrome 2 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955424 11583508 11590626 + 102005818 AGCD01024571;GBCB01006087;GBCE01055358;XM_005385527 XP_005385584 MODEL 9021303 ncrna LOC102012627 uncharacterized LOC102012627 NW_004955414 6716037 6849197 - 102012627 AGCD01014930;AGCD01014931;AGCD01014932;AGCD01014933;AGCD01014934;AGCD01014935;AGCD01014936;AGCD01014937;AGCD01014938;AGCD01014939;AGCD01014940;GBDK01105428;XR_001233085;XR_001233086;XR_001233087;XR_001233088;XR_001233089;XR_001233090;XR_001233091;XR_001233092;XR_001233093;XR_260159;XR_260161 MODEL 9012268 protein-coding Ghsr growth hormone secretagogue receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); growth hormone secretagogue receptor activity (ortholog); growth hormone-releasing hormone receptor activity (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); adult feeding behavior (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ghrelin system pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Cardiac Fibrosis (ortholog); Digestive System Neoplasms (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); membrane raft (ortholog) NW_004955420 2483173 2486414 - 102029402 AGCD01020597;XM_005383008 XP_005383065 MODEL 39133576 snrna U2 U2 spliceosomal RNA 39134109 misc_rna 7SK 7SK RNA 8790230 protein-coding Adgra3 adhesion G protein-coupled receptor A3 ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955480 2322783 2408241 + 102027747 AGCD01056611;GBCE01153498;XM_005402467 XP_005402524 MODEL 8820493 protein-coding LOC102015200 olfactory receptor 6F1-like NW_004955418 30472441 30473397 + 102015200 AGCD01019522;XM_005382377 XP_005382434 MODEL 8818607 protein-coding Cc2d2b coiled-coil and C2 domain containing 2B NW_004955507 2160454 2262333 + 102012110 AGCD01065580;AGCD01065581;AGCD01065582;AGCD01065583;GBDK01197876;XM_005407556;XM_013506214;XM_013506215;XM_013506216;XM_013506217;XM_013506218;XM_013506219;XM_013506220;XM_013506221;XM_013506222;XM_013506223;XM_013506224 XP_005407613;XP_013361668;XP_013361669;XP_013361670;XP_013361671;XP_013361672;XP_013361673;XP_013361674;XP_013361675;XP_013361676;XP_013361677;XP_013361678 MODEL 10287367 ncrna LOC106150140 uncharacterized LOC106150140 NW_004955466 9755322 9774557 + 106150140 AGCD01051053;AGCD01051054;AGCD01051055;GBDF01146329;XR_001236772 MODEL 9042742 protein-coding Klf5 KLF transcription factor 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to endothelin (ortholog); cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH adenoma (ortholog); Cardiomegaly (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955404 33642604 33665445 - 102025534 AGCD01004072;AGCD01004073;GBDK01022609;XM_005374184 XP_005374241 MODEL 8721567 protein-coding Chpf chondroitin polymerizing factor ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) NW_004955453 13932822 13937587 + 102029261 AGCD01044855;GBCQ01040789;XM_005395509 XP_005395566 MODEL 8935538 protein-coding Rgs9bp regulator of G protein signaling 9 binding protein INVOLVED IN detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH bradyopsia (ortholog); bradyopsia 2 (ortholog); fundus dystrophy (ortholog); FOUND IN photoreceptor outer segment (ortholog) NW_004955468 5311318 5313612 - 102030513 AGCD01051963;GBCQ01162978;XM_005400087 XP_005400144 MODEL 8789348 protein-coding Ist1 IST1 factor associated with ESCRT-III ENCODES a protein that exhibits identical protein binding (ortholog); MIT domain binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cell division (ortholog); cytoskeleton-dependent cytokinesis (ortholog); establishment of protein localization (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytosol (ortholog) NW_004955484 4589311 4630464 + 102016272 AGCD01058222;AGCD01058223;GBCE01098261;XM_005403525;XM_005403526;XM_013503978 XP_005403582;XP_005403583;XP_013359432 MODEL 39131623 rrna 5S_rRNA 5S ribosomal RNA 39133355 snrna U4 U4 spliceosomal RNA 8935551 ncrna LOC102003639 uncharacterized LOC102003639 NW_004955467 6581757 6582473 - 102003639 AGCD01051417;GBDF01227082;XR_263345 MODEL 8823245 pseudo LOC102010184 olfactory receptor 5A1-like NW_004955511 3897218 3898125 - 102010184 AGCD01066481 MODEL 39131545 protein-coding GPR151 G protein-coupled receptor 151 8949291 protein-coding Arfrp1 ADP ribosylation factor related protein 1 INVOLVED IN gastrulation (ortholog); Golgi to plasma membrane protein transport (ortholog); protein localization to Golgi apparatus (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); trans-Golgi network (ortholog) NW_004955528 519887 529012 + 102005171 AGCD01069537;GBDF01118263;XM_005409945 XP_005410002 MODEL 8732173 protein-coding Auts2 activator of transcription and developmental regulator AUTS2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axon extension (ortholog); dendrite extension (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); growth cone (ortholog); nucleoplasm (ortholog) NW_004955456 10294525 11417761 - 102011279 AGCD01046521;AGCD01046522;AGCD01046523;AGCD01046524;AGCD01046525;AGCD01046526;AGCD01046527;AGCD01046528;AGCD01046529;AGCD01046530;AGCD01046531;AGCD01046532;AGCD01046533;AGCD01046534;AGCD01046535;AGCD01046536;AGCD01046537;AGCD01046538;AGCD01046539;AGCD01046540;AGCD01046541;AGCD01046542;AGCD01046543;AGCD01046544;AGCD01046545;AGCD01046546;AGCD01046547;AGCD01046548;AGCD01046549;AGCD01046550;GBCB01021501;GBCQ01039445;XM_013520551;XM_013520552;XM_013520553;XM_013520554;XM_013520555;XM_013520557 XP_013376005;XP_013376006;XP_013376007;XP_013376008;XP_013376009;XP_013376011 MODEL 8808385 ncrna LOC102020082 uncharacterized LOC102020082 NW_004955406 21559824 21570115 - 102020082 AGCD01006132;AGCD01006133;GBDF01111836;XR_259503 MODEL 39132204 rrna 5S_rRNA 5S ribosomal RNA 8818667 protein-coding Tulp4 TUB like protein 4 FOUND IN cytoplasm (ortholog) NW_004955439 3935422 4121780 - 102012805 AGCD01035694;AGCD01035695;AGCD01035696;AGCD01035697;AGCD01035698;AGCD01035699;AGCD01035700;AGCD01035701;AGCD01035702;AGCD01035703;GBCQ01179666;XM_005390522;XM_005390523;XM_005390525 XP_005390579;XP_005390580;XP_005390582 MODEL 8848019 protein-coding Faxdc2 fatty acid hydroxylase domain containing 2 INVOLVED IN positive regulation of megakaryocyte differentiation (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955408 9084039 9102525 - 102005669 AGCD01008232;GBCQ01095777;GBDI01297189;XM_005376200 XP_005376257 MODEL 8935691 pseudo LOC102007177 60S ribosomal protein L7a-like NW_004955451 3799761 3801516 + 102007177 AGCD01043072;AGCD01043073;XR_262625 MODEL 8735228 protein-coding LOC102019809 histone H2B type 1 NW_004955483 913696 923492 + 102019809 AGCD01057637;GBDF01211373;XM_005403305;XM_005403306 XP_005403362;XP_005403363 MODEL 8955131 protein-coding Edn2 endothelin 2 ENCODES a protein that exhibits endothelin B receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN angiogenesis (ortholog); artery smooth muscle contraction (ortholog); axon extension (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Aortic Rupture (ortholog); Bradycardia (ortholog); Dissecting Aneurysm (ortholog); FOUND IN extracellular space (ortholog) NW_004955537 1228062 1233784 - 102006954 AGCD01070890;GBBH01169615;XM_005410587 XP_005410644 MODEL 10315020 protein-coding LOC106147168 translation initiation factor IF-2-like NW_004955524 955294 957029 - 106147168 AGCD01068730;GBCB01030724;GBDI01310612;XM_013507251 XP_013362705 MODEL 8858868 protein-coding LOC102022594 protein FAM24A-like NW_004955477 1070372 1097654 - 102022594 AGCD01055502;GBDF01046801;XM_005401947;XM_005401948;XM_005401949;XM_013503111;XM_013503112;XM_013503113 XP_005402004;XP_005402005;XP_005402006;XP_013358565;XP_013358566;XP_013358567 MODEL 8727444 protein-coding Ammecr1 AMMECR nuclear protein 1 ASSOCIATED WITH Dwarfism (ortholog); midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis (ortholog); nephrocalcinosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955490 5538445 5657959 + 102008632 AGCD01060205;AGCD01060206;AGCD01060207;GBDI01339138;XM_005404657 XP_005404714 MODEL 8863175 protein-coding Ptprd protein tyrosine phosphatase receptor type D ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); heterophilic cell-cell adhesion (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); presynaptic membrane (ortholog) NW_004955434 12033825 14132636 - 102009647 AGCD01032383;AGCD01032384;AGCD01032385;AGCD01032386;AGCD01032387;AGCD01032388;AGCD01032389;AGCD01032390;AGCD01032391;AGCD01032392;AGCD01032393;AGCD01032394;AGCD01032395;AGCD01032396;AGCD01032397;AGCD01032398;AGCD01032399;AGCD01032400;AGCD01032401;AGCD01032402;AGCD01032403;AGCD01032404;AGCD01032405;AGCD01032406;AGCD01032407;AGCD01032408;AGCD01032409;AGCD01032410;AGCD01032411;AGCD01032412;AGCD01032413;AGCD01032414;AGCD01032415;AGCD01032416;AGCD01032417;AGCD01032418;GBBH01036507;XM_013516328;XM_013516329;XM_013516330;XM_013516331;XM_013516332;XM_013516333;XM_013516334;XM_013516335;XM_013516336;XM_013516337 XP_013371782;XP_013371783;XP_013371784;XP_013371785;XP_013371786;XP_013371787;XP_013371788;XP_013371789;XP_013371790;XP_013371791 MODEL 8958392 protein-coding Dnmt3b DNA methyltransferase 3 beta ENCODES a protein that exhibits chromatin binding (ortholog); DNA (cytosine-5-)-methyltransferase activity (ortholog); DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN DNA modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN chromosome, centromeric region (ortholog); heterochromatin (ortholog); nucleoplasm (ortholog) NW_004955422 28380595 28427012 - 102006472 AGCD01023348;AGCD01023349;GBDI01367202;XM_005384861;XM_005384862;XM_005384863;XM_005384864;XM_013514151;XM_013514152;XM_013514153 XP_005384918;XP_005384919;XP_005384920;XP_005384921;XP_013369605;XP_013369606;XP_013369607 MODEL 8819076 ncrna LOC102024291 uncharacterized LOC102024291 NW_004955564 1497990 1500048 - 102024291 AGCD01074225;GBDF01014269;XR_265022 MODEL 39133849 misc_rna 7SK 7SK RNA 8738033 protein-coding Sgpl1 sphingosine-1-phosphate lyase 1 ENCODES a protein that exhibits sphinganine-1-phosphate aldolase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); apoptotic signaling pathway (ortholog); ceramide metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH genetic disease (ortholog); nephrotic syndrome (ortholog); RENI syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955437 20489641 20547105 - 102009318 AGCD01034874;AGCD01034875;AGCD01034876;AGCD01034877;GBCE01031815;XM_005390043;XM_013517017 XP_005390100;XP_013372471 MODEL 8909409 trna Trnaq-cug transfer RNA glutamine (anticodon CUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978823 AGCD01042594;AGCD01050595;AGCD01050600;AGCD01050634;AGCD01051475;AGCD01074498 MODEL 8895955 protein-coding Tlcd1 TLC domain containing 1 INVOLVED IN membrane assembly (ortholog); phospholipid homeostasis (ortholog); plasma membrane organization (ortholog); FOUND IN plasma membrane (ortholog) NW_004955481 4429923 4433147 + 102022289 AGCD01056937;AGCD01056938;GBBH01123169;GBCQ01100660;XM_005402717 XP_005402774 MODEL 8743231 protein-coding Ahsa2 Putative activator of 90 kDa heat shock protein ATPase homolog 2 NW_004955424 22688824 22700820 - 102022944 AGCD01024979;GBCE01054756;GBDF01082227;XM_005385742;XM_013514605;XM_013514606;XM_013514607 XP_005385799;XP_013370059;XP_013370060;XP_013370061 MODEL 8894977 protein-coding LOC102021582 secreted and transmembrane protein 1A-like NW_004955506 832244 843629 - 102021582 AGCD01065237;GBBH01073613;XM_005407502 XP_005407559 MODEL 8918707 protein-coding Popdc3 popeye domain cAMP effector 3 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN regulation of membrane potential (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 26 (ortholog); FOUND IN membrane (ortholog) NW_004955411 30566988 30573158 - 102030617 AGCD01012259;GBDF01133919;XM_005377823;XM_013510788 XP_005377880;XP_013366242 MODEL 8805575 ncrna LOC102005378 uncharacterized LOC102005378 NW_004955418 11451076 11451817 - 102005378 AGCD01019004;GBDF01090330;XR_260556 MODEL 8733588 protein-coding LOC102010185 olfactory receptor 4D10-like NW_004955511 4000616 4001551 + 102010185 AGCD01066486;XM_005408269 XP_005408326 MODEL 9040876 protein-coding Whamm WASP homolog associated with actin, golgi membranes and microtubules ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH Fanconi syndrome (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); Golgi membrane (ortholog) NW_004955416 13825925 13849883 - 102005372 AGCD01017234;AGCD01017235;GBBH01172264;GBCB01026385;XM_013512488 XP_013367942 MODEL 8923496 protein-coding LOC102018228 olfactory receptor 11G2-like NW_004955550 899553 900582 + 102018228 AGCD01072529;XM_005412040 XP_005412097 MODEL 39134110 misc_rna 7SK 7SK RNA 9014030 pseudo LOC102017473 protein FAM118B-like NW_004955424 21550353 21551367 - 102017473 AGCD01024900 MODEL 8752494 protein-coding LOC102015202 histone H2B type 1 NW_004955483 802067 802869 - 102015202 AGCD01057632;XM_005403291 XP_005403348 MODEL 10110121 protein-coding Hhla2 HHLA2 member of B7 family INVOLVED IN positive regulation of activated T cell proliferation (ortholog); positive regulation of cytokine production (ortholog); T cell costimulation (ortholog) NW_004955427 8944387 9007648 + 106148693 AGCD01027083;AGCD01027084;AGCD01027085;AGCD01027086;GBCQ01172932;XM_013515059;XM_013515060 XP_013370513;XP_013370514 MODEL 8740940 protein-coding Ccar1 cell division cycle and apoptosis regulator 1 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear envelope lumen (ortholog); nucleoplasm (ortholog) NW_004955425 20878178 20923007 + 102010179 AGCD01025768;AGCD01025769;GBDF01159549;XM_005386001;XM_005386002;XM_005386003 XP_005386058;XP_005386059;XP_005386060 MODEL 39133382 snrna U4 U4 spliceosomal RNA 8741810 protein-coding Dnmt3l DNA methyltransferase 3 like ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); chorionic trophoblast cell differentiation (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); ASSOCIATED WITH choline deficiency disease (ortholog); FOUND IN condensed nuclear chromosome (ortholog); cytoplasm (ortholog); ESC/E(Z) complex (ortholog) NW_004955407 41177582 41186965 + 102022360 AGCD01007860;GBBH01021901;XM_013506088 XP_013361542 MODEL 8889321 protein-coding Atg2a autophagy related 2A ENCODES a protein that exhibits lipid transfer activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN organelle membrane contact site (ortholog) NW_004955422 20261749 20290879 + 102024580 AGCD01023072;AGCD01023073;GBCB01050945;XM_005384542;XM_005384543;XM_005384544;XM_005384547;XM_013513964;XM_013513965;XM_013513966 XP_005384599;XP_005384600;XP_005384601;XP_005384604;XP_013369418;XP_013369419;XP_013369420 MODEL 8936878 protein-coding Trappc2l trafficking protein particle complex subunit 2L ASSOCIATED WITH intellectual disability (ortholog); Progressive Early-Onset Encephalopathy with Episodic Rhabdomyolysis (ortholog); FOUND IN cytosol (ortholog); TRAPP complex (ortholog) NW_004955541 2711051 2715458 + 102005968 AGCD01071423;GBDF01224055;XM_005411023;XM_013507981 XP_005411080;XP_013363435 MODEL 8715438 protein-coding Peli3 pellino E3 ubiquitin protein ligase family member 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); negative regulation of protein ubiquitination (ortholog); PARTICIPATES IN interleukin-1 signaling pathway NW_004955422 18868696 18877826 - 102010594 AGCD01022964;GBDF01002198;XM_005384400;XM_005384401;XM_005384402 XP_005384457;XP_005384458;XP_005384459 MODEL 39131624 rrna 5S_rRNA 5S ribosomal RNA 9001900 protein-coding LOC102021585 olfactory receptor 5AL1-like NW_004955511 1558626 1559570 + 102021585 AGCD01066371;XM_005408236 XP_005408293 MODEL 8789881 protein-coding Plpbp pyridoxal phosphate binding protein ASSOCIATED WITH early-onset vitamin B6-dependent epilepsy 1 (ortholog); genetic disease (ortholog); pyridoxine-dependent epilepsy (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955463 13467965 13498544 + 102012515 AGCD01049867;AGCD01049868;AGCD01049869;GBCQ01038272;XM_005398413;XM_005398414 XP_005398470;XP_005398471 MODEL 8985442 pseudo LOC102012628 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955414 14752641 14753521 - 102012628 AGCD01015156 MODEL 8814544 protein-coding Gpr152 G protein-coupled receptor 152 ENCODES a protein that exhibits identical protein binding (ortholog) NW_004955422 18029704 18034051 + 102018296 AGCD01022935;AGCD01022936;GBDI01248327;XM_005384329;XM_013513937 XP_005384386;XP_013369391 MODEL 39133577 snrna U2 U2 spliceosomal RNA 8948396 pseudo LOC102019812 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955419 17724461 17726292 - 102019812 AGCD01020163 MODEL 8956138 protein-coding Bcl10 BCL10 immune signaling adaptor ENCODES a protein that exhibits CARD domain binding (ortholog); general transcription initiation factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH colon carcinoma (ortholog); extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue (ortholog); follicular lymphoma (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); cytoplasmic microtubule (ortholog) NW_004955423 8710231 8720530 + 102025023 AGCD01023635;GBCQ01126750;XM_005385139;XM_013514539 XP_005385196;XP_013369993 MODEL 8931610 protein-coding Edn3 endothelin 3 ENCODES a protein that exhibits endothelin B receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); axon extension (ortholog); axon guidance (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Bradycardia (ortholog); congenital central hypoventilation syndrome (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog) NW_004955445 215910 238153 - 102016530 AGCD01039306;GBDK01184690;XM_005392203;XM_005392204 XP_005392260;XP_005392261 MODEL 8899142 protein-coding Boll boule RNA binding protein ENCODES a protein that exhibits identical protein binding (ortholog); translation activator activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); positive regulation of translational initiation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955403 2917694 2963470 + 102012820 AGCD01001740;AGCD01001741;AGCD01001742;GBDF01004912;XM_005373262;XM_013512039;XM_013512041 XP_005373319;XP_013367493;XP_013367495 MODEL 8797992 pseudo LOC102024292 transcription initiation factor TFIID subunit 2-like NW_004955448 12293896 12314391 - 102024292 AGCD01041546 MODEL 10346105 protein-coding LOC106150141 uncharacterized LOC106150141 NW_004955466 6261519 6264900 - 106150141 AGCD01050922;AGCD01050923;GBBH01165353;XM_013521880 XP_013377334 MODEL 9014562 trna Trnaq-uug transfer RNA glutamine (anticodon UUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955465;NW_004955465;NW_004955451 757927;13819250;13329350;12259037 757998;13819321;13329421;12259108 +;+;-;- 101978822 AGCD01043382;AGCD01050600;AGCD01050626;AGCD01057629 MODEL 8704406 protein-coding Hoxb9 homeobox B9 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cell chemotaxis (ortholog); embryonic skeletal system development (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); Breast Neoplasms (ortholog); Ovarian Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955451 12616465 12616926 + 102015274 AGCD01043414;GBDF01267242;GBDJ01193876;XM_013519051 XP_013374505 MODEL 8951920 protein-coding Klf6 KLF transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN cellular response to endothelin (ortholog); cellular response to hydrogen peroxide (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); Hypotension (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955429 1838537 1846915 + 102026341 AGCD01028409;GBDJ01008132;XM_005386866 XP_005386923 MODEL 8854492 ncrna LOC102010969 uncharacterized LOC102010969 NW_004955452 5395349 5427078 - 102010969 AGCD01044025;AGCD01044026;AGCD01044027;AGCD01044028;AGCD01044029;AGCD01044030;AGCD01044031;GBCB01057543;XR_001236120;XR_262656 MODEL 8886577 protein-coding Tlcd2 TLC domain containing 2 INVOLVED IN membrane assembly (ortholog); phospholipid homeostasis (ortholog); plasma membrane organization (ortholog); FOUND IN plasma membrane (ortholog) NW_004955481 1475748 1478447 + 102017659 AGCD01056833;GBDI01280068;XM_005402611 XP_005402668 MODEL 8988418 protein-coding Rgsl1 regulator of G protein signaling like 1 NW_004955406 21274546 21395534 + 102016666 AGCD01006121;AGCD01006122;AGCD01006123;AGCD01006124;AGCD01006125;AGCD01006126;AGCD01006127;GBDF01194182;GBDF01194183;XM_013521438 XP_013376892 MODEL 8976284 protein-coding Fmr1 Fragile X messenger ribonucleoprotein 1 ENCODES a protein that exhibits chromatin binding (ortholog); dynein complex binding (ortholog); G-quadruplex RNA binding (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); cellular response to potassium ion (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); Cajal body (ortholog) NW_004955498 566741 594837 + 102017998 AGCD01062722;AGCD01062723;GBBH01150636;GBCC01033779;XM_005406383 XP_005406440 MODEL 8764012 protein-coding Aven apoptosis and caspase activation inhibitor INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH generalized epilepsy (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955416 690440 712391 + 102023028 AGCD01016819;GBCE01054816;XM_005381166 XP_005381223 MODEL 39132209 snrna U6 U6 spliceosomal RNA 8832214 protein-coding Hibadh 3-hydroxyisobutyrate dehydrogenase ENCODES a protein that exhibits 3-hydroxyisobutyrate dehydrogenase activity (ortholog); INVOLVED IN L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; FOUND IN mitochondrion (ortholog) NW_004955410 29180411 29294273 - 102009025 AGCD01011276;AGCD01011277;AGCD01011278;AGCD01011279;AGCD01011280;AGCD01011281;GBCE01153175;XM_005377465 XP_005377522 MODEL 40834592 protein-coding TUNAR TCL1 upstream neural differentiation-associated RNA 10231719 pseudo LOC106147169 nuclease-sensitive element-binding protein 1 pseudogene NW_004955408 3316059 3316890 - 106147169 AGCD01008053 MODEL 9000754 protein-coding Dnpep aspartyl aminopeptidase ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN cytosol (ortholog) NW_004955453 14072924 14082222 + 102007505 AGCD01044857;AGCD01044858;GBDF01307634;XM_005395528;XM_005395530 XP_005395585;XP_005395587 MODEL 8947780 pseudo LOC102022595 zinc finger protein 606-like NW_004955416 31745756 31749064 - 102022595 AGCD01017769 MODEL 8711469 protein-coding Adgrb1 adhesion G protein-coupled receptor B1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); lipopolysaccharide binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); defense response to Gram-negative bacterium (ortholog); engulfment of apoptotic cell (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); glioblastoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN dendrite (ortholog); extracellular space (ortholog); focal adhesion (ortholog) NW_004955454 1250261 1313547 + 102017627 AGCD01044967;AGCD01044968;GBBH01028741;XM_013520249 XP_013375703 MODEL 8811866 ncrna LOC102005384 uncharacterized LOC102005384 NW_004955488 8933146 8961329 - 102005384 AGCD01059736;AGCD01059737;AGCD01059738;AGCD01059739;GBDF01190452;XR_264007 MODEL 39133850 misc_rna 7SK 7SK RNA 8780694 protein-coding Chpf2 chondroitin polymerizing factor 2 ENCODES a protein that exhibits N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955491 5649079 5653158 + 102006586 AGCD01060494;GBDF01155655;XM_005404824 XP_005404881 MODEL 8941054 protein-coding Sgpp1 sphingosine-1-phosphate phosphatase 1 ENCODES a protein that exhibits sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); nucleoplasm (ortholog) NW_004955466 6075507 6103739 + 102019255 AGCD01050906;AGCD01050907;GBDF01223287;XM_013522009 XP_013377463 MODEL 9062331 protein-coding Ptpre protein tyrosine phosphatase receptor type E ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine phosphatase signaling pathway (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); regulation of mast cell activation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955477 5688936 5838264 + 102014893 AGCD01055598;GBDF01075904;XM_005402013;XM_005402014;XM_005402018;XM_005402019;XM_013503075;XM_013503076;XM_013503077;XM_013503078 XP_005402070;XP_005402071;XP_005402075;XP_005402076;XP_013358529;XP_013358530;XP_013358531;XP_013358532 MODEL 39133359 snrna U4 U4 spliceosomal RNA 8993397 protein-coding Tspan33 tetraspanin 33 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN pore complex assembly (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); pore complex (ortholog) NW_004955479 9920192 9941395 + 102007766 AGCD01056508;AGCD01056509;GBCQ01004646;XM_005402406;XM_005402407 XP_005402463;XP_005402464 MODEL 8817821 protein-coding Ahsg alpha 2-HS glycoprotein ENCODES a protein that exhibits receptor signaling protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); alopecia-mental retardation syndrome 1 (ortholog); calcinosis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) NW_004955420 21071111 21078397 - 102004073 AGCD01021122;GBDK01362043;XM_005383274 XP_005383331 MODEL 8915909 protein-coding LOC102003647 olfactory receptor 51G2-like NW_004955414 20928805 20929740 - 102003647 AGCD01015395;XM_005380487 XP_005380544 MODEL 9053077 ncrna LOC102020083 uncharacterized LOC102020083 NW_004955406 42073422 42086024 - 102020083 AGCD01006696;GBDK01053873;XR_001230726;XR_001230731;XR_259535 MODEL 39132206 rrna 5S_rRNA 5S ribosomal RNA 8993927 protein-coding Gid4 GID complex subunit 4 homolog FOUND IN ubiquitin ligase complex (ortholog) NW_004955478 11223083 11242986 - 102004384 AGCD01056164;GBCQ01067338;GBDF01004608;XM_013503218 XP_013358672 MODEL 8704375 protein-coding Ccar2 cell cycle and apoptosis regulator 2 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN mitochondrial fragmentation involved in apoptotic process (ortholog); negative regulation of catalytic activity (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH Wallerian Degeneration (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); DBIRD complex (ortholog) NW_004955403 46027997 46042154 + 102013241 AGCD01002849;GBDF01085278;XM_005373683;XM_005373684;XM_005373685 XP_005373740;XP_005373741;XP_005373742 MODEL 8903927 protein-coding Fbf1 Fas binding factor 1 INVOLVED IN apical junction assembly (ortholog); cilium assembly (ortholog); establishment of epithelial cell polarity (ortholog); FOUND IN apical junction complex (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955506 6327153 6354341 + 102008754 AGCD01065412;GBDF01054141;XM_005407468;XM_013505996;XM_013505997;XM_013505998;XM_013505999;XM_013506000;XM_013506001;XM_013506002 XP_005407525;XP_013361450;XP_013361451;XP_013361452;XP_013361453;XP_013361454;XP_013361455;XP_013361456 MODEL 8810951 protein-coding Hoxc10 homeobox C10 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH Kyphoscoliosis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955458 1243529 1248653 + 102027150 AGCD01047172;GBCQ01151679;XM_005397198 XP_005397255 MODEL 8848071 protein-coding Rhag Rh associated glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); carbon dioxide transmembrane transport (ortholog); carbon dioxide transport (ortholog); ASSOCIATED WITH hemolytic anemia (ortholog); overhydrated hereditary stomatocytosis (ortholog); Rh deficiency syndrome (ortholog); FOUND IN ankyrin-1 complex (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955411 8335223 8354430 + 102006754 AGCD01011727;GBBH01082480;XM_005377673 XP_005377730 MODEL 8747132 protein-coding Ammecr1l AMMECR1 like NW_004955459 2654361 2678080 + 102020428 AGCD01047994;GBDF01120756;XM_005397568;XM_005397570;XM_005397572 XP_005397625;XP_005397627;XP_005397629 MODEL 39133473 snrna U2 U2 spliceosomal RNA 8820372 pseudo LOC102010186 disks large-associated protein 5 pseudogene NW_004955430 21698565 21699103 + 102010186 AGCD01029774 MODEL 39134111 misc_rna 7SK 7SK RNA 8804004 protein-coding Tusc2 tumor suppressor 2, mitochondrial calcium regulator INVOLVED IN cell maturation (ortholog); defense response to Gram-negative bacterium (ortholog); inflammatory response (ortholog); FOUND IN mitochondrion (ortholog) NW_004955532 2128430 2131235 - 102030564 AGCD01070219;GBDF01004498;XM_005410261 XP_005410318 MODEL 8947196 protein-coding LOC102018232 prostatic spermine-binding protein-like NW_004955442 14575069 14588232 - 102018232 AGCD01037827;AGCD01037828;AGCD01037829;GBDF01305030;XM_005391408;XM_005391409;XM_013517784 XP_005391465;XP_005391466;XP_013373238 MODEL 8784107 protein-coding Isx intestine specific homeobox ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of intestinal absorption (ortholog); regulation of transcription by RNA polymerase II (ortholog); regulation of vitamin A metabolic process (ortholog); ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955405 42979063 43015561 + 102004888 AGCD01005592;XM_005374701 XP_005374758 MODEL 8899235 ncrna LOC102015205 uncharacterized LOC102015205 NW_004955420 17649991 17670098 + 102015205 AGCD01021026;GBCQ01174712;XR_001233823 MODEL 8986751 protein-coding Por P450 (cytochrome) oxidoreductase ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); electron transfer activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; doxorubicin pharmacokinetics pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); amenorrhea (ortholog); Antley-Bixler syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955456 14698589 14748520 + 102006877 AGCD01046650;GBDI01012447;XM_005396803;XM_013520565 XP_005396860;XP_013376019 MODEL 9019223 trna Trnar-acg transfer RNA arginine (anticodon ACG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978835 AGCD01010511;AGCD01021398;AGCD01039089;AGCD01050591;AGCD01050597;AGCD01057606;AGCD01057629 MODEL 8840191 protein-coding Arg1 arginase 1 ENCODES a protein that exhibits arginase activity (ortholog); identical protein binding (ortholog); manganese ion binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to glucagon stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute necrotizing pancreatitis (ortholog); amino acid metabolic disorder (ortholog); FOUND IN extracellular space (ortholog); neuronal cell body (ortholog) NW_004955436 12235767 12247817 + 102018129 AGCD01033834;GBDK01069675;XM_005389201;XM_005389202 XP_005389258;XP_005389259 MODEL 8953172 protein-coding Bop1 BOP1 ribosomal biogenesis factor ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of 5.8S rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955454 2882694 2907177 - 102026942 AGCD01045038;AGCD01045039;GBBH01143564;XM_005395860 XP_005395917 MODEL 39131625 rrna 5S_rRNA 5S ribosomal RNA 9028890 protein-coding Klf7 KLF transcription factor 7 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955457 7833711 7918754 + 102013254 AGCD01046890;AGCD01046891;AGCD01046892;GBBH01137501;XM_005396985;XM_005396986 XP_005397042;XP_005397043 MODEL 8981595 protein-coding Ahsp alpha hemoglobin stabilizing protein INVOLVED IN erythrocyte differentiation (ortholog); protein folding (ortholog); protein stabilization (ortholog); ASSOCIATED WITH cerebral infarction (ortholog); coronary restenosis (ortholog); Fetal Death (ortholog); FOUND IN cytoplasm (ortholog) NW_004955493 8337761 8344497 + 102007783 AGCD01061291;GBDJ01142828;XM_005405323;XM_005405324 XP_005405380;XP_005405381 MODEL 8927001 protein-coding Atg2b autophagy related 2B ENCODES a protein that exhibits lipid transfer activity (ortholog); ASSOCIATED WITH myeloid leukemia (ortholog); myeloid neoplasm (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955438 18080641 18153490 - 102022123 AGCD01035464;GBCQ01155159;XM_005390394;XM_005390396;XM_013517180 XP_005390451;XP_005390453;XP_013372634 MODEL 9039994 protein-coding Fmr1nb FMR1 neighbor NW_004955498 611443 643011 + 102020264 AGCD01062723;AGCD01062724;GBDF01085541;XM_005406393 XP_005406450 MODEL 39132210 snrna U6 U6 spliceosomal RNA 8918761 ncrna LOC102003654 uncharacterized LOC102003654 NW_004955417 11249264 11260937 - 102003654 AGCD01018126;AGCD01018127;GBBH01160626;XR_260474 MODEL 8949102 protein-coding Pelo pelota mRNA surveillance and ribosome rescue factor ENCODES a protein that exhibits ribosome binding (ortholog); stalled ribosome sensor activity (ortholog); INVOLVED IN chromosome organization (ortholog); endoderm development (ortholog); inner cell mass cell proliferation (ortholog); PARTICIPATES IN translation termination pathway; FOUND IN cytosolic ribosome (ortholog); Dom34-Hbs1 complex (ortholog) NW_004955446 14564366 14566178 - 102026812 AGCD01040279;GBCQ01001142;XM_005392726 XP_005392783 MODEL 8984930 protein-coding LOC102021588 mitochondrial amidoxime-reducing component 1 NW_004955520 2979516 3001945 - 102021588 AGCD01068087;GBCB01018209;XM_005409265 XP_005409322 MODEL 8976257 pseudo LOC102017477 heterogeneous nuclear ribonucleoprotein D-like pseudogene NW_004955503 587031 588337 + 102017477 AGCD01064516;XM_005406924 MODEL 8968040 protein-coding Whr1 winged helix repair factor 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN positive regulation of Ras protein signal transduction (ortholog); positive regulation of single strand break repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955437 485110 492493 + 102006607 AGCD01034137;GBDF01043359;XM_005389405 XP_005389462 MODEL 8831533 protein-coding Gid8 GID complex subunit 8 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955528 1146313 1153093 - 102020705 AGCD01069552;GBDF01051218;XM_005410002;XM_005410003;XM_013507475 XP_005410059;XP_005410060;XP_013362929 MODEL 10359855 protein-coding LOC106147170 endochitinase A-like NW_004955524 3195878 3199487 + 106147170 AGCD01068867;GBDJ01272871;XM_013507262 XP_013362716 MODEL 9003445 pseudo LOC102024297 40S ribosomal protein S24 pseudogene NW_004955728 13674 14067 + 102024297 AGCD01078208 MODEL 8714502 ncrna LOC102005387 uncharacterized LOC102005387 NW_004955493 5235633 5241231 + 102005387 AGCD01061061;GBDF01080114;XR_001231263 MODEL 8853285 protein-coding Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 ENCODES a protein that exhibits 5-hydroxymethyl-dUMP N-hydrolase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN allantoin metabolic process (ortholog); deoxyribonucleoside monophosphate catabolic process (ortholog); dGMP catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955437 9145737 9147388 - 102004856 AGCD01034518;GBDJ01128546;XM_005389755;XM_013516909 XP_005389812;XP_013372363 MODEL 39133851 misc_rna 7SK 7SK RNA 8755481 pseudo LOC102007178 stress-induced-phosphoprotein 1-like NW_004955404 10266595 10270280 + 102007178 AGCD01003377 MODEL 9005094 protein-coding Sgpp2 sphingosine-1-phosphate phosphatase 2 ENCODES a protein that exhibits sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN regulation of type B pancreatic cell proliferation (ortholog); sphingosine metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; FOUND IN endoplasmic reticulum (ortholog) NW_004955453 11244077 11361990 - 102024083 AGCD01044806;AGCD01044807;GBDJ01238332;XM_005395495;XM_005395497 XP_005395552;XP_005395554 MODEL 8783238 protein-coding Ptprf protein tyrosine phosphatase receptor type F ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN cell migration (ortholog); homophilic cell-cell adhesion (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH Aplasia or Hypoplasia of Breasts and/or Nipples 2 (ortholog); congestive heart failure (ortholog); Disease Progression (ortholog); FOUND IN endosome (ortholog); excitatory synapse (ortholog); growth cone (ortholog) NW_004955537 3096601 3185682 + 102029007 AGCD01070946;AGCD01070947;AGCD01070948;GBDI01341617;XM_005410662;XM_005410663;XM_005410664;XM_005410665;XM_005410670 XP_005410719;XP_005410720;XP_005410721;XP_005410722;XP_005410727 MODEL 8937257 protein-coding Trappc3 trafficking protein particle complex subunit 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); TRAPP complex (ortholog) NW_004955452 14160612 14172896 - 102027140 AGCD01044453;AGCD01044454;GBCC01015358;XM_005395172;XM_005395173;XM_005395174;XM_005395175 XP_005395229;XP_005395230;XP_005395231;XP_005395232 MODEL 9019993 protein-coding LOC102015206 PRAME family member 8-like NW_004955486 484558 487683 + 102015206 AGCD01058858;XM_013504138 XP_013359592 MODEL 9029763 protein-coding Avil advillin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); Arp2/3 complex binding (ortholog); INVOLVED IN actin filament organization (ortholog); cilium assembly (ortholog); nervous system development (ortholog); ASSOCIATED WITH nephrotic syndrome (ortholog); nephrotic syndrome type 2 (ortholog); nephrotic syndrome type 21 (ortholog); FOUND IN actin filament (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) NW_004955458 5499392 5523463 - 102003626 AGCD01047495;AGCD01047496;AGCD01047497;GBBH01022613;GBDJ01116167;XM_013520970;XM_013520971 XP_013376424;XP_013376425 MODEL 8914282 ncrna LOC102018674 uncharacterized LOC102018674 NW_004955451 315679 320230 - 102018674 AGCD01042932;GBDK01028726;XR_262564 MODEL 9023279 protein-coding Hibch 3-hydroxyisobutyryl-CoA hydrolase ENCODES a protein that exhibits 3-hydroxyisobutyryl-CoA hydrolase activity (ortholog); INVOLVED IN L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-hydroxyisobutryl-CoA hydrolase deficiency (ortholog); genetic disease (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955403 8752339 8796693 + 102003397 AGCD01001889;GBDF01222031;XM_005373307 XP_005373364 MODEL 8848247 protein-coding Ccbe1 collagen and calcium binding EGF domains 1 ENCODES a protein that exhibits collagen binding (ortholog); protease binding (ortholog); INVOLVED IN lung development (ortholog); lymph vessel development (ortholog); lymphangiogenesis (ortholog); ASSOCIATED WITH Distal Renal Tubular Acidosis 4 with Hemolytic Anemia (ortholog); Facies (ortholog); genetic disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) NW_004955402 43551810 43819731 - 102014847 AGCD01001073;AGCD01001074;AGCD01001075;AGCD01001076;AGCD01001077;AGCD01001078;AGCD01001079;AGCD01001080;GBDJ01234822;XM_005373004;XM_013511096 XP_005373061;XP_013366550 MODEL 9017616 protein-coding Rhbdd1 rhomboid domain containing 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); cellular response to UV (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955453 7527090 7656689 - 102010767 AGCD01044747;AGCD01044748;AGCD01044749;GBDJ01117091;XM_005395453;XM_005395455;XM_005395456;XM_005395457;XM_005395458;XM_005395459;XM_005395460 XP_005395510;XP_005395512;XP_005395513;XP_005395514;XP_005395515;XP_005395516;XP_005395517 MODEL 8831642 pseudo LOC102022596 zinc finger protein 649 pseudogene NW_004955479 7209599 7211237 + 102022596 AGCD01056403 MODEL 8909288 protein-coding Bcl11a BCL11 transcription factor A ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to L-glutamate (ortholog); negative regulation of branching morphogenesis of a nerve (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); apraxia (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 23233523 23330679 + 102028770 AGCD01025009;AGCD01025010;AGCD01025011;AGCD01025012;GBDI01237635;XM_005385757;XM_013514702;XM_013514703;XM_013514704;XM_013514705;XM_013514707;XM_013514708;XM_013514709 XP_005385814;XP_013370156;XP_013370157;XP_013370158;XP_013370159;XP_013370161;XP_013370162;XP_013370163 MODEL 8792445 protein-coding Ednra endothelin receptor type A ENCODES a protein that exhibits endothelin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); aorta development (ortholog); PARTICIPATES IN endothelin signaling pathway; inflammatory response pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); asthma (ortholog); Cardiovascular Abnormalities (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog); T-tubule (ortholog) NW_004955428 3062303 3114761 + 102011786 AGCD01027648;GBCE01097518;XM_005386667 XP_005386724 MODEL 9061502 pseudo LOC102010970 dnaJ homolog subfamily B member 6-like NW_004955452 1116250 1116893 - 102010970 AGCD01043831 MODEL 9006014 protein-coding Chpt1 choline phosphotransferase 1 ENCODES a protein that exhibits diacylglycerol cholinephosphotransferase activity (ortholog); phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN phosphatidylcholine biosynthetic process (ortholog); platelet activating factor biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); glycoproteinosis (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955405 37081024 37093798 + 102002990 AGCD01005437;AGCD01005438;GBBH01142824;GBDK01239060;XM_013518716 XP_013374170 MODEL 10284101 protein-coding LOC106150142 translation initiation factor IF-2-like NW_004955466 8952717 8958082 - 106150142 AGCD01051009;AGCD01051010;GBBH01137518;GBCB01040872;XM_013521881 XP_013377335 MODEL 9055028 protein-coding Tusc3 tumor suppressor candidate 3 ENCODES a protein that exhibits oligosaccharyltransferase complex binding (ortholog); INVOLVED IN cognition (ortholog); magnesium ion transport (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 24 (ortholog); autosomal recessive intellectual developmental disorder 7 (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN oligosaccharyltransferase complex (ortholog) NW_004955463 1633776 1848187 - 102012514 AGCD01049526;AGCD01049527;GBCQ01150942;XM_005398343 XP_005398400 MODEL 39133360 snrna U4 U4 spliceosomal RNA 9047086 protein-coding Gpr153 G protein-coupled receptor 153 ASSOCIATED WITH Childhood Schizophrenia (ortholog); schizophrenia (ortholog) NW_004955486 6264321 6270979 + 102025913 AGCD01059116;AGCD01059117;GBBH01225078;GBCE01002905;XM_013504323 XP_013359777 MODEL 8827365 protein-coding Porcn porcupine O-acyltransferase ENCODES a protein that exhibits palmitoleoyltransferase activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); protein lipidation (ortholog); protein palmitoleylation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); focal dermal hypoplasia (ortholog); genetic disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955543 75870 91575 + 102018334 AGCD01071556;AGCD01071557;GBDK01394558;XM_005411256;XM_005411257;XM_013508161;XM_013508162;XM_013508163;XM_013508164 XP_005411313;XP_005411314;XP_013363615;XP_013363616;XP_013363617;XP_013363618 MODEL 9032736 protein-coding Klf8 KLF transcription factor 8 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955475 2938071 2998435 + 102027402 AGCD01054822;AGCD01054823;AGCD01054824;GBCE01084134;XM_005401541 XP_005401598 MODEL 8739241 protein-coding Hoxc11 homeobox C11 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic digit morphogenesis (ortholog); embryonic skeletal joint morphogenesis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 1231625 1234785 + 102026835 AGCD01047172;GBCB01111909;XM_005397197 XP_005397254 MODEL 8729168 protein-coding Sgsh N-sulfoglucosamine sulfohydrolase ENCODES a protein that exhibits N-sulfoglucosamine sulfohydrolase activity (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); glycosaminoglycan catabolic process (ortholog); heparan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); Developmental Disabilities (ortholog); diarrhea (ortholog); FOUND IN lysosomal lumen (ortholog); lysosome (ortholog) NW_004955506 2701901 2713431 + 102019718 AGCD01065301;GBDJ01225391;XM_005407325;XM_005407326;XM_013505991;XM_013505992;XM_013505993;XR_264337;XR_264338 XP_005407382;XP_005407383;XP_013361445;XP_013361446;XP_013361447 MODEL 39133383 snrna U4 U4 spliceosomal RNA 8738494 protein-coding Adgrb2 adhesion G protein-coupled receptor B2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); G protein-coupled receptor signaling pathway (ortholog); peripheral nervous system development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hereditary spastic paraplegia (ortholog); Spastic Paraparesis (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); synapse (ortholog) NW_004955452 10131371 10167597 - 102011834 AGCD01044269;GBDI01055095;XM_005395033;XM_005395035;XM_005395036;XM_013519736;XM_013519737;XM_013519738;XM_013519739;XM_013519740 XP_005395090;XP_005395092;XP_005395093;XP_013375190;XP_013375191;XP_013375192;XP_013375193;XP_013375194 MODEL 8916034 pseudo LOC102010187 glycerol-3-phosphate acyltransferase 3 pseudogene NW_004955512 1355820 1356600 + 102010187 AGCD01066640 MODEL 8915605 ncrna LOC102017480 uncharacterized LOC102017480 NW_004955506 2406371 2410177 + 102017480 AGCD01065294;GBDF01192849;XR_001231587;XR_264332 MODEL 8927679 pseudo LOC102018233 heat shock cognate 71 kDa protein pseudogene NW_004955557 808259 809210 + 102018233 AGCD01073262 MODEL 8866376 protein-coding LOC102012632 olfactory receptor 52L1 NW_004955414 21869937 21870911 - 102012632 AGCD01015436;XM_005380106 XP_005380163 MODEL 8833633 protein-coding Tspan4 tetraspanin 4 ENCODES a protein that exhibits antigen binding (ortholog); integrin binding (ortholog); INVOLVED IN mitocytosis (ortholog); protein-containing complex assembly (ortholog); regulation of mitochondrial membrane potential (ortholog); FOUND IN migrasome (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955476 11277881 11291008 - 102007656 AGCD01055446;AGCD01055447;GBDK01000814;XM_005401804;XM_005401805;XM_013502958 XP_005401861;XP_005401862;XP_013358412 MODEL 39131626 rrna 5S_rRNA 5S ribosomal RNA 39132207 rrna 5S_rRNA 5S ribosomal RNA 8838809 trna Trnar-ccg transfer RNA arginine (anticodon CCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004957365;NW_004955442;NW_004955465 7;14214277;13880906 79;14214349;13880978 +;-;+ 101978836 AGCD01037806;AGCD01050633;AGCD01080761 MODEL 8880724 protein-coding Plpp1 phospholipid phosphatase 1 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); diacylglycerol diphosphate phosphatase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid catabolic process (ortholog); phospholipid dephosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; Fabry disease pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); membrane (ortholog) NW_004955446 12201678 12279992 + 102018446 AGCD01040227;AGCD01040228;GBCC01038817;GBDF01046744;XM_013518405 XP_013373859 MODEL 9033711 protein-coding LOC102007180 60S ribosomal protein L31 NW_004955404 47061481 47061923 + 102007180 AGCD01004474;XM_005374211 XP_005374268 MODEL 9020082 protein-coding Dntt DNA nucleotidylexotransferase ENCODES a protein that exhibits DNA nucleotidylexotransferase activity (ortholog); INVOLVED IN DNA metabolic process (ortholog); response to ATP (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955507 2494074 2551326 + 102016621 AGCD01065589;AGCD01065590;GBDI01211390;XM_005407574;XM_005407575 XP_005407631;XP_005407632 MODEL 8955571 protein-coding Bora BORA aurora kinase A activator ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN regulation of mitotic nuclear division (ortholog); regulation of mitotic spindle organization (ortholog); regulation of protein localization (ortholog); FOUND IN meiotic spindle (ortholog) NW_004955404 33923496 33946113 - 102027935 AGCD01004084;GBBH01137438;XM_005374192;XM_005374193 XP_005374249;XP_005374250 MODEL 8982417 protein-coding Arg2 arginase 2 ENCODES a protein that exhibits arginase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN urea cycle pathway; ASSOCIATED WITH acute kidney failure (ortholog); asthma (ortholog); congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog) NW_004955466 2549557 2577060 - 102010682 AGCD01050744;AGCD01050745;GBCB01001233;XM_005399066 XP_005399123 MODEL 8820048 protein-coding Fbh1 F-box DNA helicase 1 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); DNA helicase activity (ortholog); DNA translocase activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955421 22535777 22579965 + 102028545 AGCD01022139;AGCD01022140;GBDF01155258;XM_005383853;XM_005383855;XM_005383857;XM_005383858 XP_005383910;XP_005383912;XP_005383914;XP_005383915 MODEL 39132212 snrna U6 U6 spliceosomal RNA 8732630 protein-coding Atg3 autophagy related 3 ENCODES a protein that exhibits Atg12 transferase activity (ortholog); Atg8-family conjugating enzyme activity (ortholog); Atg8-family ligase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); alcoholic hepatitis (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955427 12881454 12906399 - 102028317 AGCD01027229;AGCD01027230;GBDI01082546;XM_005386390 XP_005386447 MODEL 8772149 protein-coding LOC102003656 zinc finger protein 878-like NW_004955483 540140 571870 + 102003656 AGCD01057622;AGCD01057623;GBDF01054439;XM_013503796;XM_013503797 XP_013359250;XP_013359251 MODEL 8820091 protein-coding Ptprg protein tyrosine phosphatase receptor type G ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of epithelial cell migration (ortholog); negative regulation of neuron projection development (ortholog); regulation of homophilic cell adhesion (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN extracellular space (ortholog) NW_004955517 3676342 4352909 - 102003052 AGCD01067669;AGCD01067670;AGCD01067671;AGCD01067672;AGCD01067673;AGCD01067674;AGCD01067675;AGCD01067676;AGCD01067677;AGCD01067678;AGCD01067679;AGCD01067680;AGCD01067681;AGCD01067682;AGCD01067683;AGCD01067684;AGCD01067685;AGCD01067686;AGCD01067687;AGCD01067688;AGCD01067689;GBDF01090393;GBDF01090403;XM_013506946 XP_013362400 MODEL 8839034 protein-coding Amn amnion associated transmembrane protein ENCODES a protein that exhibits cargo receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); cobalamin transport (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Edema (ortholog); Extravasation of Diagnostic and Therapeutic Materials (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955538 2017476 2021890 + 102015146 AGCD01071094;AGCD01071095;GBCQ01008311;GBDF01250836;XM_005410890 XP_005410947 MODEL 8710056 protein-coding LOC102018675 uncharacterized LOC102018675 NW_004955622 83258 210783 - 102018675 AGCD01077384;AGCD01077385;AGCD01077386;AGCD01077387;AGCD01077388;AGCD01077389;AGCD01077390;AGCD01077391;AGCD01077392;AGCD01077393;AGCD01077394;AGCD01077395;XM_013510157 XP_013365611 MODEL 8940448 protein-coding LOC102021590 putative olfactory receptor 2W6 NW_004955524 202737 203681 - 102021590 AGCD01068669;XM_005409657 XP_005409714 MODEL 39134112 misc_rna 7SK 7SK RNA 9028247 protein-coding Pelp1 proline, glutamate and leucine rich protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); SUMO binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN euchromatin (ortholog); MLL1 complex (ortholog); nucleolus (ortholog) NW_004955467 10086025 10128969 - 102013490 AGCD01051545;AGCD01051546;GBCQ01033699;XM_013522128;XM_013522129;XM_013522130 XP_013377582;XP_013377583;XP_013377584 MODEL 8962639 protein-coding Whrn whirlin ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cerebellar Purkinje cell layer formation (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Aland Island eye disease (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 31 (ortholog); FOUND IN actin filament (ortholog); apical dendrite (ortholog); axon collateral (ortholog) NW_004955419 13116001 13207266 + 102010486 AGCD01019996;AGCD01019997;GBDK01284958;XM_005382629;XM_005382630;XM_005382631;XM_005382633;XM_013513190;XM_013513191 XP_005382686;XP_005382687;XP_005382688;XP_005382690;XP_013368644;XP_013368645 MODEL 8840562 protein-coding Gpr155 G protein-coupled receptor 155 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to cholesterol (ortholog); cognition (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Hepatomegaly (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955449 889657 930146 + 102005862 AGCD01041775;AGCD01041776;GBDI01125208;XM_005393184;XM_005393185;XM_005393186;XM_005393188 XP_005393241;XP_005393242;XP_005393243;XP_005393245 MODEL 8751071 protein-coding Isy1 ISY1 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955429 13513191 13527516 - 102010824 AGCD01028753;GBCB01000866;XM_005386995 XP_005387052 MODEL 8871145 pseudo LOC102005391 olfactory receptor 9A4-like NW_004955494 1701718 1710311 - 102005391 AGCD01061420 MODEL 8768061 ncrna LOC102024299 uncharacterized LOC102024299 NW_004956553 502 2571 + 102024299 AGCD01079788;GBCQ01187473;XR_265210 MODEL 8707244 protein-coding Gigyf1 GRB10 interacting GYF protein 1 INVOLVED IN insulin-like growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Coffin-Siris syndrome 6 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955573 228926 240425 + 102014624 AGCD01074969;GBDF01192387;XM_005413696;XM_005413697;XM_005413698 XP_005413753;XP_005413754;XP_005413755 MODEL 39133385 snrna U4 U4 spliceosomal RNA 8767221 ncrna LOC102020085 uncharacterized LOC102020085 NW_004955407 37623542 37626349 + 102020085 AGCD01007785;GBDF01278071;XR_259618 MODEL 8787949 protein-coding Ednrb endothelin receptor type B ENCODES a protein that exhibits endothelin receptor activity (ortholog); peptide hormone binding (ortholog); type 1 angiotensin receptor binding (ortholog); INVOLVED IN aldosterone metabolic process (ortholog); calcium ion transmembrane transport (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase signaling pathway; endothelin signaling pathway; inflammatory response pathway; ASSOCIATED WITH ABCD syndrome (ortholog); asthma (ortholog); Breast Neoplasms (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog) NW_004955404 29394253 29425358 + 102015277 AGCD01003975;GBCQ01024197;XM_005374148 XP_005374205 MODEL 8986370 protein-coding Tut1 terminal uridylyl transferase 1, U6 snRNA-specific ENCODES a protein that exhibits enzyme binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); histone mRNA catabolic process (ortholog); mRNA 3'-end processing (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955599 596565 606498 + 102016770 AGCD01076661;GBDJ01131428;XM_005414795 XP_005414852 MODEL 8824404 protein-coding Trappc3l trafficking protein particle complex subunit 3L FOUND IN TRAPP complex (ortholog) NW_004955526 120620 217855 + 102025940 AGCD01069212;AGCD01069213;AGCD01069214;AGCD01069215;GBCQ01154261;XM_005409744;XM_013507364;XM_013507365;XM_013507366;XM_013507367;XM_013507368 XP_005409801;XP_013362818;XP_013362819;XP_013362820;XP_013362821;XP_013362822 MODEL 8979398 protein-coding Aida axin interactor, dorsalization associated ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of JUN kinase activity (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955520 1819617 1851273 + 102017806 AGCD01068062;AGCD01068063;GBBH01062431;GBDF01236570;XM_005409254 XP_005409311 MODEL 39133475 snrna U2 U2 spliceosomal RNA 8872779 protein-coding Avl9 AVL9 cell migration associated INVOLVED IN cell migration (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN recycling endosome (ortholog) NW_004955617 61225 129222 + 102007841 AGCD01077269;AGCD01077270;GBCE01039356;XM_013510145;XR_001232583;XR_001232584;XR_001232585;XR_001232586;XR_001232587;XR_001232588 XP_013365599 MODEL 8949700 protein-coding Tlcd3a TLC domain containing 3A ASSOCIATED WITH Fraser syndrome 3 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955481 2283620 2292100 + 102025791 AGCD01056873;GBBH01007264;GBDF01128173;XM_005402638;XM_013503379 XP_005402695;XP_013358833 MODEL 10238309 protein-coding LOC106147171 translation initiation factor IF-2-like NW_004955524 3232131 3233346 + 106147171 AGCD01068869;GBDI01105569;XM_013507265 XP_013362719 MODEL 8892486 protein-coding Postn periostin ENCODES a protein that exhibits heparin binding (ortholog); metal ion binding (ortholog); INVOLVED IN bone regeneration (ortholog); cell adhesion (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); aggressive periodontitis (ortholog); aspirin-induced respiratory disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); neuromuscular junction (ortholog) NW_004955431 8510646 8544901 + 102022213 AGCD01030127;AGCD01030128;GBDI01138507;XM_005387655;XM_005387656;XM_005387657;XM_005387658;XM_005387659;XM_005387661;XM_013515886 XP_005387712;XP_005387713;XP_005387714;XP_005387715;XP_005387716;XP_005387718;XP_013371340 MODEL 8966528 ncrna LOC102010190 uncharacterized LOC102010190 NW_004955520 1134654 1136351 + 102010190 AGCD01068044;GBCQ01105007;XR_001231874;XR_264583 MODEL 8975562 protein-coding Bcl11b BCL11 transcription factor B ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); axonogenesis (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); combined immunodeficiency (ortholog); COVID-19 (ortholog); FOUND IN neuron projection (ortholog); nucleus (ortholog); SWI/SNF complex (ortholog) NW_004955438 20562345 20637662 - 102016750 AGCD01035516;AGCD01035517;GBDJ01172501;XM_005390451 XP_005390508 MODEL 39133852 misc_rna 7SK 7SK RNA 8824898 pseudo LOC102017481 B-cell lymphoma/leukemia 10 pseudogene NW_004955427 10006809 10009922 + 102017481 AGCD01027112 MODEL 8743771 protein-coding Adgrb3 adhesion G protein-coupled receptor B3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); motor learning (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955488 3803859 4509043 + 102023707 AGCD01059585;AGCD01059586;AGCD01059587;AGCD01059588;AGCD01059589;AGCD01059590;AGCD01059591;AGCD01059592;AGCD01059593;AGCD01059594;AGCD01059595;AGCD01059596;AGCD01059597;GBCE01177377;XM_005404463;XM_005404464;XM_005404465 XP_005404520;XP_005404521;XP_005404522 MODEL 39133361 snrna U4 U4 spliceosomal RNA 8770265 pseudo LOC102005392 G patch domain-containing protein 11-like NW_004955422 28803634 28805092 + 102005392 AGCD01023370 MODEL 39132208 rrna 5S_rRNA 5S ribosomal RNA 8845050 protein-coding Fn1 fibronectin 1 ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); mercury ion binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media; acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basement membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955457 629599 694948 + 102017427 AGCD01046712;GBCE01002201;XM_005396902;XM_005396903;XM_005396904;XM_005396905;XM_005396909;XM_005396910;XM_005396911;XM_005396912;XM_005396913;XM_013520687;XM_013520688;XM_013520689 XP_005396959;XP_005396960;XP_005396961;XP_005396962;XP_005396966;XP_005396967;XP_005396968;XP_005396969;XP_005396970;XP_013376141;XP_013376142;XP_013376143 MODEL 8706328 protein-coding Klf9 KLF transcription factor 9 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to cortisol stimulus (ortholog); cellular response to endothelin (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH Body Weight (ortholog); diastolic heart failure (ortholog); endometriosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955434 2685416 2716669 + 102029218 AGCD01032105;GBDK01095916;XM_005388555 XP_005388612 MODEL 8908971 protein-coding Hic1 HIC ZBTB transcriptional repressor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Gastrointestinal Neoplasms (ortholog); macular degeneration (ortholog); FOUND IN chromatin (ortholog) NW_004955481 1179015 1182936 - 102011660 AGCD01056827;AGCD01056828;GBBH01208306;XM_005402595;XM_005402596;XM_005402597 XP_005402652;XP_005402653;XP_005402654 MODEL 8755190 protein-coding Hoxc12 homeobox C12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) NW_004955458 1213269 1214835 + 102026078 AGCD01047172;XM_005397196 XP_005397253 MODEL 8894065 protein-coding Fbl fibrillarin rRNA 2'-O-methyltransferase ENCODES a protein that exhibits ATPase binding (ortholog); histone H2AQ104 methyltransferase activity (ortholog); RNA binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA methylation (ortholog); sno(s)RNA metabolic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autoimmune disease (ortholog); Breast Neoplasms (ortholog); FOUND IN Cajal body (ortholog); chromosome (ortholog); dense fibrillar component (ortholog) NW_004955578 1176713 1186873 + 102022440 AGCD01075511;GBDF01153801;XM_005414084 XP_005414141 MODEL 8744759 protein-coding Rhbdd2 rhomboid domain containing 2 FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955456 14652995 14666155 + 102006543 AGCD01046647;AGCD01046648;GBDF01052883;XM_005396802 XP_005396859 MODEL 8947445 protein-coding Sgsm1 small G protein signaling modulator 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955455 258472 343079 - 102011400 AGCD01045555;GBDF01281537;XM_005396135;XM_005396136 XP_005396192;XP_005396193 MODEL 8739035 protein-coding Tut4 terminal uridylyl transferase 4 ENCODES a protein that exhibits miRNA binding (ortholog); RNA uridylyltransferase activity (ortholog); uridylyltransferase activity (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); interleukin-6-mediated signaling pathway (ortholog); miRNA catabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH breast cancer (ortholog); liver benign neoplasm (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955464 6610350 6734606 + 102017754 AGCD01050035;AGCD01050036;AGCD01050037;AGCD01050038;GBDF01123217;XM_005398575;XM_005398576;XM_005398577;XM_005398578;XM_005398579;XM_013521699 XP_005398632;XP_005398633;XP_005398634;XP_005398635;XP_005398636;XP_013377153 MODEL 8804393 protein-coding LOC102018676 protein SPACA7-like NW_004955404 1903444 1922226 + 102018676 AGCD01003236;AGCD01003237;GBDF01001013;XM_005373996;XM_013515729 XP_005374053;XP_013371183 MODEL 8741546 ncrna LOC102010975 uncharacterized LOC102010975 NW_004955457 7328755 7340258 + 102010975 AGCD01046876;GBDF01145843;XR_262928 MODEL 8827360 ncrna LOC102018234 uncharacterized LOC102018234 NW_004955443 19101620 19119702 - 102018234 AGCD01038619;GBDF01262552;XR_262213 MODEL 39131627 rrna 5S_rRNA 5S ribosomal RNA 9068074 ncrna LOC102010191 uncharacterized LOC102010191 NW_004955521 1508637 1515821 + 102010191 AGCD01068187;GBDF01220340;XR_264600;XR_264602 MODEL 8826799 ncrna LOC102020095 uncharacterized LOC102020095 NW_004955462 3167635 3172265 - 102020095 AGCD01049195;GBDF01306975;XR_263092 MODEL 9010431 protein-coding LOC102012634 olfactory receptor 481 NW_004955414 23630286 23633450 + 102012634 AGCD01015508;AGCD01015509;XM_005380206 XP_005380263 MODEL 8748283 protein-coding LOC102015209 olfactory receptor 4B1-like NW_004955422 284748 304833 - 102015209 AGCD01022402;GBCQ01059871;GBDF01155592;XM_013513821 XP_013369275 MODEL 8944614 protein-coding Gigyf2 GRB10 interacting GYF protein 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); proline-rich region binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); feeding behavior (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); Parkinson's Disease 11 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955453 3201593 3301541 - 102013580 AGCD01044654;GBCB01041020;XM_013519902 XP_013375356 MODEL 8701340 protein-coding Tspan5 tetraspanin 5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955405 8725761 8759784 - 102020520 AGCD01004751;GBCQ01094713;GBDF01221548;XM_013517460 XP_013372914 MODEL 8781949 protein-coding LOC102007188 torsin-1A-interacting protein 2 NW_004955406 19092006 19122814 - 102007188 AGCD01006074;GBBH01032401;XM_005374979;XM_005374980;XM_005374981;XM_013521267;XM_013521272;XM_013521279;XM_013521287 XP_005375036;XP_005375037;XP_005375038;XP_013376721;XP_013376726;XP_013376733;XP_013376741 MODEL 8866111 protein-coding Plpp2 phospholipid phosphatase 2 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid dephosphorylation (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN caveola (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955495 7307079 7310898 + 102027996 AGCD01062130;GBCB01088570;GBDJ01189155;XM_005406052 XP_005406109 MODEL 8729687 protein-coding Borcs5 BLOC-1 related complex subunit 5 INVOLVED IN axon development (ortholog); lysosome localization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN axon (ortholog); BORC complex (ortholog); cytoplasmic side of lysosomal membrane (ortholog) NW_004955413 9309766 9399378 + 102015707 AGCD01013902;AGCD01013903;GBCE01187874;XM_005378962;XM_005378964;XM_013511430;XM_013511431 XP_005379019;XP_005379021;XP_013366884;XP_013366885 MODEL 39132216 snrna U6 U6 spliceosomal RNA 8959030 protein-coding Ccdc102a coiled-coil domain containing 102A NW_004955433 15138379 15150041 - 102029548 AGCD01031746;GBBH01114835;GBDF01019045;XM_013516254 XP_013371708 MODEL 8845481 ncrna LOC102003659 uncharacterized LOC102003659 NW_004955420 14434101 14442240 + 102003659 AGCD01020946;GBDF01020272;XR_260715;XR_260716 MODEL 39134113 misc_rna 7SK 7SK RNA 8861967 protein-coding Amn1 antagonist of mitotic exit network 1 homolog FOUND IN microvillus membrane (ortholog) NW_004955505 3840570 3897720 - 102029095 AGCD01065060;AGCD01065061;AGCD01065062;AGCD01065063;AGCD01065064;AGCD01065065;AGCD01065066;GBCE01186433;GBDF01010691;XM_013505959 XP_013361413 MODEL 8756483 pseudo LOC102021591 origin recognition complex subunit 6 pseudogene NW_004955435 4369736 4386510 + 102021591 AGCD01032826;AGCD01032827;XM_005389096 MODEL 9051638 protein-coding Ptprh protein tyrosine phosphatase receptor type H ENCODES a protein that exhibits cadherin binding (ortholog); protein tyrosine phosphatase activity (ortholog); FOUND IN cytosol (ortholog); microvillus (ortholog); plasma membrane (ortholog) NW_004955567 992880 1018343 + 102024391 AGCD01074450;AGCD01074451;AGCD01074452;AGCD01074453;GBDK01387246;XM_013509243;XM_013509244;XM_013509245;XR_001232403 XP_013364697;XP_013364698;XP_013364699 MODEL 8789364 protein-coding Pemt phosphatidylethanolamine N-methyltransferase ENCODES a protein that exhibits phosphatidylethanolamine binding (ortholog); phosphatidylethanolamine N-methyltransferase activity (ortholog); S-adenosylmethionine-dependent methyltransferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); glycerophospholipid metabolic process (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN choline metabolic pathway; glycerophospholipid metabolic pathway; homocysteine metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Neoplasms (ortholog); liver cirrhosis (ortholog); FOUND IN brush border membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955577 365031 443138 + 102017077 AGCD01075392;AGCD01075393;AGCD01075394;AGCD01075395;GBDF01001294;XM_005413968;XM_005413970;XM_005413971;XM_013509631 XP_005414025;XP_005414027;XP_005414028;XP_013365085 MODEL 10076475 ncrna LOC106147172 uncharacterized LOC106147172 NW_004955524 3298016 3298956 - 106147172 AGCD01068879;GBDF01224074;XR_001231951 MODEL 9029822 protein-coding Wif1 WNT inhibitory factor 1 INVOLVED IN positive regulation of fat cell differentiation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH breast cancer (ortholog); Colorectal Neoplasms (ortholog); Endometrioid Carcinomas (ortholog) NW_004955458 11755147 11834047 - 102009152 AGCD01047759;AGCD01047760;GBBH01163275;GBCE01002151;XM_013521009 XP_013376463 MODEL 8989132 protein-coding Isyna1 inositol-3-phosphate synthase 1 ENCODES a protein that exhibits inositol-3-phosphate synthase activity (ortholog); INVOLVED IN inositol biosynthetic process (ortholog); negative regulation of inositol biosynthetic process (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); polycystic ovary syndrome (ortholog) NW_004955524 3099017 3100454 + 102009871 AGCD01068855;GBDF01008608;GBDJ01020646;XM_005409700 XP_005409757 MODEL 9019876 protein-coding LOC102010978 vegetative cell wall protein gp1-like NW_004955410 12702718 12714924 - 102010978 AGCD01010864;GBDJ01264475;XM_005377303;XM_013510591 XP_005377360;XP_013366045 MODEL 39133386 snrna U4 U4 spliceosomal RNA 9024573 protein-coding Dnttip1 deoxynucleotidyltransferase terminal interacting protein 1 ENCODES a protein that exhibits DNA binding (ortholog); nucleosome binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chromatin organization (ortholog); FOUND IN chromosome (ortholog); histone deacetylase complex (ortholog); nucleolus (ortholog) NW_004955445 11479582 11501008 - 102028591 AGCD01039696;AGCD01039697;GBDF01083444;XM_005392410 XP_005392467 MODEL 8915903 protein-coding Argfx arginine-fifty homeobox ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) NW_004955427 20965012 20969269 + 102030651 AGCD01027429;GBDF01307515;XM_005386487 XP_005386544 MODEL 8949009 ncrna LOC102022600 uncharacterized LOC102022600 NW_004955419 746130 748094 - 102022600 AGCD01019608;XR_260597 MODEL 8931564 protein-coding Atg4a autophagy related 4A cysteine peptidase ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); protein-phosphatidylethanolamide deconjugating activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); protein delipidation (ortholog); PARTICIPATES IN autophagy pathway NW_004955490 7765145 7825126 - 102014369 AGCD01060263;AGCD01060264;AGCD01060265;GBCB01019840;XM_005404678 XP_005404735 MODEL 39133476 snrna U2 U2 spliceosomal RNA 9062166 protein-coding Edrf1 erythroid differentiation regulatory factor 1 INVOLVED IN positive regulation of DNA-templated transcription (ortholog) NW_004955477 3604186 3648061 + 102008095 AGCD01055557;AGCD01055558;AGCD01055559;GBDF01187670;XM_005401992;XM_005401993;XM_005401994 XP_005402049;XP_005402050;XP_005402051 MODEL 8934931 protein-coding Trappc4 trafficking protein particle complex subunit 4 INVOLVED IN autophagy (ortholog); dendrite development (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Neurodevelopmental Disorder with Epilepsy, Spasticity, and Brain Atrophy (ortholog); Neurodevelopmental Disorder with Progressive Microcephaly, Spasticity, and Brain Anomalies (ortholog); FOUND IN dendrite (ortholog); Golgi stack (ortholog); postsynaptic density membrane (ortholog) NW_004955412 20129154 20133043 + 102022576 AGCD01012994;GBDF01004559;XM_005378290 XP_005378347 MODEL 8743639 protein-coding Aif1 allograft inflammatory factor 1 ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcohol-Induced Disorders, Nervous System (ortholog); Alzheimer's disease (ortholog); FOUND IN actin filament (ortholog); cell projection (ortholog); cytoplasm (ortholog) NW_004955437 157509 158919 + 102013966 AGCD01034106;GBCE01030227;XM_005389329 XP_005389386 MODEL 8846350 pseudo LOC102007193 keratin-associated protein 12-1-like NW_004955407 41612826 41613140 + 102007193 AGCD01007872 MODEL 8971403 protein-coding Avpi1 arginine vasopressin induced 1 INVOLVED IN positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog) NW_004955507 3760228 3768320 - 102029770 AGCD01065635;GBDK01423207;XM_005407619;XM_013506192 XP_005407676;XP_013361646 MODEL 8837795 protein-coding Tlcd3b TLC domain containing 3B ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH cone-rod dystrophy 22 (ortholog); spondylocostal dysostosis 5 (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955493 6929477 6940109 + 102024921 AGCD01061148;AGCD01061149;GBDF01049970;XM_005405196;XM_005405197;XM_005405198;XM_005405199 XP_005405253;XP_005405254;XP_005405255;XP_005405256 MODEL 8740660 protein-coding Gpr156 G protein-coupled receptor 156 INVOLVED IN stereocilium bundle organization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Autosomal Recessive Nonsyndromic Deafness 121 (ortholog); Hearing Loss (ortholog); FOUND IN plasma membrane (ortholog) NW_004955427 19742505 19796288 - 102023502 AGCD01027376;AGCD01027377;AGCD01027378;AGCD01027379;GBDF01187294;XM_005386463 XP_005386520 MODEL 39134114 misc_rna 7SK 7SK RNA 8851986 ncrna LOC102018682 uncharacterized LOC102018682 NW_004955405 39905538 39909717 + 102018682 AGCD01005503;GBDJ01111460;XR_259449 MODEL 9033586 trna Trnar-ccu transfer RNA arginine (anticodon CCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955553;NW_004955553;NW_004955442;NW_004955442;NW_004955494 1884364;1885977;14211807;14190493;3729252 1884436;1886049;14211879;14190565;3729324 +;+;-;-;- 101978840 AGCD01037805;AGCD01037806;AGCD01061481;AGCD01072903 MODEL 8839266 protein-coding Tut7 terminal uridylyl transferase 7 ENCODES a protein that exhibits miRNA binding (ortholog); RNA uridylyltransferase activity (ortholog); uridylyltransferase activity (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); miRNA metabolic process (ortholog); oocyte maturation (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955432 1268217 1330385 + 102023287 AGCD01030591;AGCD01030592;GBDF01085558;XM_005387913;XM_005387914;XM_005387915;XM_013516018;XM_013516019 XP_005387970;XP_005387971;XP_005387972;XP_013371472;XP_013371473 MODEL 9046160 protein-coding LOC102017485 vomeronasal type-1 receptor 90-like NW_004955429 12349676 12350584 + 102017485 AGCD01028714;XM_005387246 XP_005387303 MODEL 8825690 protein-coding Sgsm2 small G protein signaling modulator 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN late endosome to Golgi transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog) NW_004955481 871719 907326 - 102010902 AGCD01056816;GBDF01081055;XM_005402592;XM_005402593;XM_005402594 XP_005402649;XP_005402650;XP_005402651 MODEL 10364025 protein-coding LOC106147173 arrestin domain-containing protein 2-like NW_004955524 3321325 3322120 - 106147173 AGCD01068881;GBCE01142122;GBDI01227027;XM_013507271 XP_013362725 MODEL 39133362 snrna U4 U4 spliceosomal RNA 8830182 protein-coding Bcl2 BCL2 apoptosis regulator ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); channel activity (ortholog); INVOLVED IN actin filament organization (ortholog); animal organ morphogenesis (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN ceramide signaling pathway; erythropoietin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955402 46911125 47084214 - 102022347 AGCD01001169;AGCD01001170;GBCB01075663;XM_013511218 XP_013366672 MODEL 8796603 protein-coding Adgrd1 adhesion G protein-coupled receptor D1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); regulation of skeletal muscle contraction (ortholog); FOUND IN plasma membrane (ortholog) NW_004955482 1091081 1173087 - 102029081 AGCD01057201;AGCD01057202;GBDJ01139336;XM_005402985;XM_005402986;XM_005402987 XP_005403042;XP_005403043;XP_005403044 MODEL 8893790 pseudo LOC102012636 40S ribosomal protein S2 pseudogene NW_004955472 1057016 1058005 - 102012636 AGCD01053370 MODEL 126903042 protein-coding GIMAP6 GTPase, IMAP family member 6 8701357 protein-coding Chrac1 chromatin accessibility complex subunit 1 INVOLVED IN chromatin remodeling (ortholog); nucleosome assembly (ortholog); regulation of DNA replication (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; FOUND IN pericentric heterochromatin (ortholog) NW_004955461 14184318 14189645 + 102023235 AGCD01049048;GBBH01119368;XM_005398053;XM_013521311 XP_005398110;XP_013376765 MODEL 8948495 protein-coding Plxna1 plexin A1 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in salivary gland branching (ortholog); gonadotrophin-releasing hormone neuronal migration to the hypothalamus (ortholog); neuron projection extension (ortholog); ASSOCIATED WITH DWORSCHAK-PUNETHA NEURODEVELOPMENTAL SYNDROME (ortholog); epilepsy (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955429 16482821 16522978 - 102030554 AGCD01028833;GBBH01185809;XM_013515479;XM_013515480 XP_013370933;XP_013370934 MODEL 8832570 protein-coding Plpp3 phospholipid phosphatase 3 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); delta-catenin binding (ortholog); integrin binding (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); blood vessel development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); coronary artery disease (ortholog); left ventricular failure (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955464 3122420 3197359 + 102021743 AGCD01049971;AGCD01049972;GBDJ01134336;XM_013521597;XM_013521598 XP_013377051;XP_013377052 MODEL 8852971 protein-coding Hic2 HIC ZBTB transcriptional repressor 2 ASSOCIATED WITH megacolon (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 17610042 17643381 + 102018658 AGCD01037974;AGCD01037975;GBDK01056946;XM_005391713;XM_005391714 XP_005391770;XP_005391771 MODEL 8725848 protein-coding Klhdc1 kelch domain containing 1 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955409 12914446 12970266 - 102027820 AGCD01009577;AGCD01009578;AGCD01009579;AGCD01009580;AGCD01009581;AGCD01009582;GBDK01058373;XM_005376833;XM_005376834;XM_005376835 XP_005376890;XP_005376891;XP_005376892 MODEL 8728075 protein-coding Rhbdd3 rhomboid domain containing 3 INVOLVED IN liver development (ortholog); MAPK cascade (ortholog); negative regulation of natural killer cell activation (ortholog); ASSOCIATED WITH substance-related disorder (ortholog) NW_004955455 3564867 3570910 - 102003730 AGCD01045636;GBDF01047829;XM_005396194;XM_005396195;XM_005396196 XP_005396251;XP_005396252;XP_005396253 MODEL 8705185 protein-coding Pot1 protection of telomeres 1 ENCODES a protein that exhibits 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); DEAD/H-box RNA helicase binding (ortholog); G-rich single-stranded DNA binding (ortholog); INVOLVED IN establishment of protein localization to telomere (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); positive regulation of DNA strand elongation (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); Cerebroretinal Microangiopathy with Calcifications and Cysts 3 (ortholog); cholecystitis (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear telomere cap complex (ortholog); nucleoplasm (ortholog) NW_004955479 6140599 6230512 - 102018183 AGCD01056377;AGCD01056378;AGCD01056379;GBDF01156854;XM_005402344;XM_005402345;XM_005402346;XM_013503293;XR_001230883 XP_005402401;XP_005402402;XP_005402403;XP_013358747 MODEL 8701410 protein-coding Trappc5 trafficking protein particle complex subunit 5 FOUND IN TRAPP complex (ortholog) NW_004955563 1600027 1601685 - 102026581 AGCD01074153;GBBH01000859;XM_005413166;XM_005413167;XM_005413168;XM_013509161 XP_005413223;XP_005413224;XP_005413225;XP_013364615 MODEL 8731635 pseudo LOC102018237 high mobility group protein B1-like NW_004955445 10890882 10892048 - 102018237 AGCD01039680 MODEL 10179801 ncrna LOC106150143 uncharacterized LOC106150143 NW_004955466 8152401 8155131 - 106150143 AGCD01050979;XR_001236773;XR_001236774 MODEL 8859128 protein-coding Penk proenkephalin ENCODES a protein that exhibits opioid peptide activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN aggressive behavior (ortholog); behavioral fear response (ortholog); behavioral response to ethanol (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Anhedonia (ortholog); FOUND IN perikaryon; axon (ortholog); axon terminus (ortholog) NW_004955454 15425712 15426685 - 102007624 AGCD01045494;GBDJ01079314;GBDJ01079318;XM_005396126 XP_005396183 MODEL 8816819 protein-coding LOC102020097 serpin B9-like NW_004955465 10275349 10285478 - 102020097 AGCD01050506;GBDK01011155;XM_013521778 XP_013377232 MODEL 8892055 protein-coding Exd1 exonuclease 3'-5' domain containing 1 INVOLVED IN piRNA processing (ortholog); regulatory ncRNA-mediated gene silencing (ortholog); FOUND IN PET complex (ortholog) NW_004955416 8032189 8089903 - 102004701 AGCD01017024;AGCD01017025;AGCD01017026;AGCD01017027;AGCD01017028;GBCQ01032561;GBDI01232396;XM_013512483 XP_013367937 MODEL 8865513 protein-coding Fn3k fructosamine 3 kinase ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955506 434613 451063 - 102005399 AGCD01065226;AGCD01065227;AGCD01065228;GBDJ01126427;XM_013506007;XM_013506008;XM_013506009;XM_013506010;XM_013506011;XM_013506012 XP_013361461;XP_013361462;XP_013361463;XP_013361464;XP_013361465;XP_013361466 MODEL 9063783 protein-coding Dnttip2 deoxynucleotidyltransferase terminal interacting protein 2 INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) NW_004955423 817034 828706 + 102011780 AGCD01023421;GBDI01264653;XM_005385005 XP_005385062 MODEL 9018313 protein-coding Borcs6 BLOC-1 related complex subunit 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN lysosome localization (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); FOUND IN BORC complex (ortholog) NW_004955467 8766322 8769169 + 102022801 AGCD01051471;GBBH01198077;XM_005399428 XP_005399485 MODEL 8889132 protein-coding Tspan6 tetraspanin 6 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog) NW_004955503 6782264 6788533 - 102020466 AGCD01064769;AGCD01064770;GBBH01229992;XM_005406932 XP_005406989 MODEL 8935220 protein-coding Sgsm3 small G protein signaling modulator 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); plasma membrane to endosome transport (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Autosomal Recessive Intellectual Developmental Disorder 84 (ortholog); FOUND IN cytosol (ortholog); gap junction (ortholog); Golgi apparatus (ortholog) NW_004955413 26094170 26139062 + 102008837 AGCD01014423;AGCD01014424;GBDF01054066;XM_005379314;XM_005379315;XM_005379318;XM_005379319;XM_005379320;XM_005379321;XM_013511485;XM_013511486 XP_005379371;XP_005379372;XP_005379375;XP_005379376;XP_005379377;XP_005379378;XP_013366939;XP_013366940 MODEL 8948439 protein-coding Hoxc13 homeobox C13 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); hair follicle development (ortholog); ASSOCIATED WITH BILATERAL CLEFT LIP (ortholog); ectodermal dysplasia 9 (ortholog); FOUND IN nucleus (ortholog) NW_004955458 1197295 1205098 + 102025764 AGCD01047172;XM_005397195 XP_005397252 MODEL 8832785 protein-coding Ccdc102b coiled-coil domain containing 102B ENCODES a protein that exhibits protein serine/threonine kinase binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); FOUND IN centriole (ortholog) NW_004955402 52377366 52495386 + 102030585 AGCD01001325;AGCD01001326;AGCD01001327;AGCD01001328;AGCD01001329;AGCD01001330;GBDJ01213459;XM_005373045;XM_005373046;XM_005373047;XM_005373048;XM_005373049;XM_013511295 XP_005373102;XP_005373103;XP_005373104;XP_005373105;XP_005373106;XP_013366749 MODEL 8921679 protein-coding Fblim1 filamin binding LIM protein 1 ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); regulation of integrin activation (ortholog); PARTICIPATES IN integrin mediated signaling pathway; FOUND IN cell junction (ortholog); cell periphery (ortholog); cytoplasm (ortholog) NW_004955527 2399804 2418160 - 102009211 AGCD01069433;AGCD01069434;GBBH01030848;GBCE01029663;XM_013507417 XP_013362871 MODEL 9058225 protein-coding LOC102024300 keratin-associated protein 4-1-like NW_004955451 15611349 15612053 - 102024300 AGCD01043621;AGCD01043622;XM_013519128 XP_013374582 MODEL 39133853 misc_rna 7SK 7SK RNA 9038917 pseudo LOC102007194 metal-response element-binding transcription factor 2-like NW_004955407 20859491 20861983 - 102007194 AGCD01007345 MODEL 8934260 pseudo LOC102021595 small glutamine-rich tetratricopeptide repeat-containing protein beta pseudogene NW_004955539 1341270 1342180 + 102021595 AGCD01071206 MODEL 9016964 protein-coding Amot angiomotin ENCODES a protein that exhibits angiostatin binding (ortholog); identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel endothelial cell migration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN actin filament (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) NW_004955490 2965899 3042541 + 102028425 AGCD01060156;GBCQ01015232;XM_005404628;XM_013504539;XM_013504540;XM_013504541;XM_013504542 XP_005404685;XP_013359993;XP_013359994;XP_013359995;XP_013359996 MODEL 8921463 protein-coding Wipf1 WAS/WASL interacting protein family member 1 ENCODES a protein that exhibits cytoskeletal anchor activity (ortholog); protein folding chaperone (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); positive regulation of protein export from nucleus (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog) NW_004955449 760382 831007 + 102021190 AGCD01041772;AGCD01041773;AGCD01041774;GBBH01142069;GBDF01014452;XM_013518745 XP_013374199 MODEL 8764814 protein-coding LOC102005393 long-chain-fatty-acid--CoA ligase ACSBG2-like NW_004955495 3360519 3386816 - 102005393 AGCD01061850;AGCD01061851;AGCD01061852;GBDF01010958;GBDF01197189;XM_013505360 XP_013360814 MODEL 39134115 misc_rna 7SK 7SK RNA 9053400 protein-coding Avpr1a arginine vasopressin receptor 1A ENCODES a protein that exhibits peptide hormone binding (ortholog); V1A vasopressin receptor binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to water deprivation (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 1; ASSOCIATED WITH acute kidney failure (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); plasma membrane (ortholog) NW_004955458 10245325 10253209 - 102007518 AGCD01047677;GBDF01125391;GBDJ01409936;XM_013520787 XP_013376241 MODEL 8731161 protein-coding Gpr157 G protein-coupled receptor 157 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN circadian behavior (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); radial glial cell differentiation (ortholog); FOUND IN ciliary membrane (ortholog) NW_004955486 4172515 4188887 + 102022607 AGCD01059057;GBBH01066894;GBCB01001213;XM_005404310 XP_005404367 MODEL 8958681 pseudo LOC102018687 translationally-controlled tumor protein pseudogene NW_004955454 7152912 7153484 - 102018687 AGCD01045283;XM_005396028 MODEL 8742137 protein-coding LOC102010200 protein S100-A6-like NW_004955545 34876 36059 - 102010200 AGCD01071760;GBDI01224351;XM_005411403 XP_005411460 MODEL 39133364 snrna U4 U4 spliceosomal RNA 8978026 protein-coding Nccrp1 NCCRP1, F-box associated domain containing INVOLVED IN positive regulation of cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955468 353066 356650 - 102026735 AGCD01051693;GBDK01195401;XM_005399790 XP_005399847 MODEL 9022720 protein-coding Tvp23a trans-golgi network vesicle protein 23 homolog A NW_004955442 7691770 7716383 + 102006960 AGCD01037628;GBBH01007446;XM_005391182;XM_005391183;XM_013517908;XM_013517909;XM_013517910;XM_013517911;XM_013517912;XM_013517913;XM_013517914 XP_005391239;XP_005391240;XP_013373362;XP_013373363;XP_013373364;XP_013373365;XP_013373366;XP_013373367;XP_013373368 MODEL 39132218 snrna U6 U6 spliceosomal RNA 9023530 protein-coding LOC102010984 sentrin-specific protease 3 NW_004955467 9351956 9374126 - 102010984 AGCD01051498;GBDJ01134691;XM_005399477;XM_005399478;XM_005399483;XM_013522078;XM_013522079;XM_013522080;XM_013522081;XM_013522082 XP_005399534;XP_005399535;XP_005399540;XP_013377532;XP_013377533;XP_013377534;XP_013377535;XP_013377536 MODEL 8891761 pseudo LOC102022603 liver carboxylesterase 2-like NW_004955484 9789580 9816841 - 102022603 AGCD01058431;AGCD01058432 MODEL 8860648 protein-coding Atg4b autophagy related 4B cysteine peptidase ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955542 164969 192498 - 102005841 AGCD01071461;GBCE01096660;XM_005411119;XM_013508088 XP_005411176;XP_013363542 MODEL 8897813 protein-coding LOC102003660 cytochrome P450 2J2-like NW_004955420 23534311 23545670 + 102003660 AGCD01021248;GBDJ01218648;XM_013513341 XP_013368795 MODEL 8718814 protein-coding Eea1 early endosome antigen 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); GTP-dependent protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); endocytosis (ortholog); vesicle fusion (ortholog); FOUND IN axonal spine (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955405 29760332 29959553 - 102022251 AGCD01005256;AGCD01005257;AGCD01005258;AGCD01005259;AGCD01005260;AGCD01005261;AGCD01005262;AGCD01005263;GBDJ01165087;XM_013518252 XP_013373706 MODEL 8964248 protein-coding Aif1l allograft inflammatory factor 1 like ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH breast cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); focal adhesion (ortholog) NW_004955513 936889 954667 + 102018519 AGCD01066837;GBCQ01004723;XM_005408351;XM_005408353 XP_005408408;XP_005408410 MODEL 9002863 protein-coding Ptprj protein tyrosine phosphatase receptor type J ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); delta-catenin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); blood coagulation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; somatostatin signaling pathway; ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); cell-cell junction (ortholog) NW_004955422 396266 438792 - 102005815 AGCD01022405;AGCD01022406;GBDJ01233455;GBDJ01239540;XM_013514213 XP_013369667 MODEL 8741949 protein-coding Chrd chordin ENCODES a protein that exhibits BMP binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN artery morphogenesis (ortholog); BMP signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH DiGeorge syndrome (ortholog); syndromic microphthalmia 5 (ortholog); velocardiofacial syndrome (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); extracellular space (ortholog) NW_004955420 23111690 23120038 - 102029405 AGCD01021226;GBBH01113396;GBDJ01402854;XM_013513322;XM_013513323;XM_013513324 XP_013368776;XP_013368777;XP_013368778 MODEL 39131628 rrna 5S_rRNA 5S ribosomal RNA 8983166 protein-coding Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha ENCODES a protein that exhibits BAT3 complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of ERAD pathway (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955495 5025038 5051810 - 102018300 AGCD01061970;AGCD01061971;AGCD01061972;GBCE01081756;XM_005405830;XM_005405831;XM_005405832;XM_013505255;XM_013505256;XM_013505257 XP_005405887;XP_005405888;XP_005405889;XP_013360709;XP_013360710;XP_013360711 MODEL 8887608 protein-coding Hoxc4 homeobox C4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cartilage development (ortholog); cellular response to glial cell derived neurotrophic factor (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 1251601 1313291 + 102027495 AGCD01047172;AGCD01047173;AGCD01047174;GBCQ01144513;XM_005397199;XM_005397200;XM_005397201;XM_005397202 XP_005397256;XP_005397257;XP_005397258;XP_005397259 MODEL 8928642 protein-coding Klhdc10 kelch domain containing 10 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955479 10743658 10826129 + 102012195 AGCD01056560;AGCD01056561;AGCD01056562;GBDF01004541;XM_005402420;XM_005402421;XM_013503269 XP_005402477;XP_005402478;XP_013358723 MODEL 8990178 ncrna LOC102018240 uncharacterized LOC102018240 NW_004955447 18427382 18430221 + 102018240 AGCD01041172;GBDF01114538;XR_262446 MODEL 8984071 protein-coding LOC102017490 mitotic spindle-associated MMXD complex subunit MIP18-like NW_004955433 23508419 23541261 - 102017490 AGCD01031972;AGCD01031973;AGCD01031974;AGCD01031975;AGCD01031976;XM_005388515 XP_005388572 MODEL 39133387 snrna U4 U4 spliceosomal RNA 8846566 protein-coding Bcl2a1 BCL2 related protein A1 ENCODES a protein that exhibits BH domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cerebral cortex development (ortholog); response to cisplatin (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH allergic disease (ortholog); Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955533 773912 785040 - 102016308 AGCD01070329;GBDJ01389835;XM_005410388;XR_001232042 XP_005410445 MODEL 8870333 ncrna LOC102010203 uncharacterized LOC102010203 NW_004955551 286892 305957 - 102010203 AGCD01072653;AGCD01072654;GBDK01406556;XR_001232275;XR_264923 MODEL 8996212 protein-coding Gimap6 GTPase, IMAP family member 6 INVOLVED IN autophagy (ortholog); cell redox homeostasis (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH primary immunodeficiency disease (ortholog); FOUND IN cytosol (ortholog) NW_004955491 5125041 5130182 - 102026332 AGCD01060471;GBBH01064402;XM_013504618 XP_013360072 MODEL 8799566 protein-coding Plxna2 plexin A2 ENCODES a protein that exhibits identical protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); centrosome localization (ortholog); cerebellar granule cell precursor tangential migration (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN plasma membrane (ortholog) NW_004955489 3914137 4116780 + 102027310 AGCD01059895;AGCD01059896;AGCD01059897;GBCE01117243;GBDI01026905;XM_005404545 XP_005404602 MODEL 8925570 protein-coding Ccdc106 coiled-coil domain containing 106 FOUND IN nucleoplasm (ortholog) NW_004955567 699551 703745 - 102012910 AGCD01074425;GBDK01359467;XM_005413289 XP_005413346 MODEL 8733908 ncrna LOC102024306 uncharacterized LOC102024306 NW_004955456 2252901 2273331 - 102024306 AGCD01046252;GBDK01060500;XR_262869 MODEL 8770545 protein-coding Tlcd4 TLC domain containing 4 NW_004955435 278795 351707 + 102020947 AGCD01032720;AGCD01032721;AGCD01032722;GBCQ01033522;XM_013516468;XM_013516469;XM_013516470;XM_013516471;XM_013516472;XM_013516473;XM_013516474;XM_013516475;XM_013516476 XP_013371922;XP_013371923;XP_013371924;XP_013371925;XP_013371926;XP_013371927;XP_013371928;XP_013371929;XP_013371930 MODEL 8840538 protein-coding Fbln1 fibulin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix structural constituent (ortholog); fibrinogen binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); embryo implantation (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH Autosomal Recessive Syndrome of Syndactyly, Undescended Testes and Central Nervous System Defects (ortholog); endometriosis (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN basement membrane (ortholog); elastic fiber (ortholog); extracellular matrix (ortholog) NW_004955413 29837134 29911313 + 102005360 AGCD01014596;GBBH01002248;GBBH01002249;XM_005379491 XP_005379548 MODEL 39133623 mirna MIR505 microRNA 505 10303095 ncrna LOC106150144 uncharacterized LOC106150144 NW_004955466 4588071 4590028 + 106150144 AGCD01050834;XR_001236775;XR_001236776 MODEL 8813455 protein-coding Aifm1 apoptosis inducing factor mitochondria associated 1 ENCODES a protein that exhibits DNA binding (ortholog); FAD binding (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to aldosterone (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial intermembrane space (ortholog) NW_004955473 4891955 4925705 + 102008718 AGCD01053962;GBDF01250246;XM_005401243;XM_005401244 XP_005401300;XP_005401301 MODEL 8725824 protein-coding Arglu1 arginine and glutamate rich 1 ENCODES a protein that exhibits pre-mRNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955404 4962000 4980226 + 102026596 AGCD01003302;GBCE01004218;XM_005374018 XP_005374075 MODEL 39133477 snrna U2 U2 spliceosomal RNA 9062659 protein-coding Pepd peptidase D ENCODES a protein that exhibits peptidase activity (ortholog); proline dipeptidase activity (ortholog); INVOLVED IN negative regulation of programmed cell death (ortholog); proteolysis (ortholog); ASSOCIATED WITH chronic ulcer of skin (ortholog); disease by infectious agent (ortholog); genetic disease (ortholog) NW_004955468 3147871 3277294 - 102027507 AGCD01051857;AGCD01051858;AGCD01051859;GBBH01004035;XM_013522477;XM_013522478 XP_013377931;XP_013377932 MODEL 8758463 pseudo LOC102020101 DET1 homolog pseudogene NW_004955412 22190147 22191725 - 102020101 AGCD01013039 MODEL 8868489 pseudo LOC102028829 ataxin-3-like NW_004955457 8642531 8660437 - 102028829 AGCD01046914 MODEL 9007267 protein-coding Avpr1b arginine vasopressin receptor 1B ENCODES a protein that exhibits identical protein binding (ortholog); peptide hormone binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); intracellular pH reduction (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN dendrite (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955406 41706088 41716173 - 102016976 AGCD01006688;AGCD01006689;GBDF01306643;XM_005375385;XM_013523068 XP_005375442;XP_013378522 MODEL 8719457 ncrna LOC102018688 uncharacterized LOC102018688 NW_004955406 40043515 40046054 + 102018688 AGCD01006652;GBCQ01091085;XR_259528 MODEL 8911167 protein-coding Gpr158 G protein-coupled receptor 158 ENCODES a protein that exhibits enzyme activator activity (ortholog); G protein-coupled glycine receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN brain development (ortholog); cognition (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); postsynaptic density membrane (ortholog) NW_004955429 3641764 4053860 - 102006800 AGCD01028469;AGCD01028470;AGCD01028471;AGCD01028472;AGCD01028473;AGCD01028474;AGCD01028475;AGCD01028476;AGCD01028477;AGCD01028478;AGCD01028479;GBCB01051533;XM_005386897 XP_005386954 MODEL 9021760 protein-coding Exd2 exonuclease 3'-5' domain containing 2 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN DNA double-strand break processing (ortholog); double-strand break repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); site of DNA damage (ortholog) NW_004955466 1114299 1169124 - 102029275 AGCD01050689;AGCD01050690;AGCD01050691;AGCD01050692;AGCD01050693;GBCE01153423;XM_005399039;XM_005399040 XP_005399096;XP_005399097 MODEL 8709873 protein-coding Borcs7 BLOC-1 related complex subunit 7 INVOLVED IN axon development (ortholog); lysosome localization (ortholog); motor behavior (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); neuroaxonal dystrophy (ortholog); schizophrenia (ortholog); FOUND IN BORC complex (ortholog); lysosome (ortholog) NW_004955485 7605277 7615924 - 102010267 AGCD01058665;GBCB01024707;XM_005403820 XP_005403877 MODEL 8732879 protein-coding Tspan7 tetraspanin 7 INVOLVED IN regulation of postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH intellectual disability (ortholog); non-syndromic X-linked intellectual disability 58 (ortholog); FOUND IN postsynapse (ortholog) NW_004955566 75576 203512 + 102007825 AGCD01074344;GBBH01119190;XM_005413275 XP_005413332 MODEL 39133854 misc_rna 7SK 7SK RNA 8803236 protein-coding Itch itchy E3 ubiquitin protein ligase ENCODES a protein that exhibits arrestin family protein binding (ortholog); CXCR chemokine receptor binding (ortholog); ligase activity (ortholog); INVOLVED IN negative regulation of alpha-beta T cell proliferation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Notch signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Multisystem Autoimmune Disease with Facial Dysmorphism (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955422 26810829 26918517 - 102023489 AGCD01023303;GBCQ01067103;GBCQ01067104;XM_013514114 XP_013369568 MODEL 8801683 protein-coding Doc2a double C2 domain alpha INVOLVED IN calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of calcium ion-dependent exocytosis (ortholog); spontaneous neurotransmitter secretion (ortholog); ASSOCIATED WITH spondylocostal dysostosis 5 (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog); lysosome (ortholog) NW_004955493 6948089 6953835 + 102027314 AGCD01061151;AGCD01061152;GBDF01252913;XM_005405205;XM_005405206;XM_005405207;XM_005405208;XM_005405209;XM_005405210;XM_013504783 XP_005405262;XP_005405263;XP_005405264;XP_005405265;XP_005405266;XP_005405267;XP_013360237 MODEL 8876351 ncrna LOC102007199 uncharacterized LOC102007199 NW_004955409 10077543 10110578 - 102007199 AGCD01009457;AGCD01009458;GBDF01260753;XR_001232639;XR_001232640;XR_259766 MODEL 8864597 protein-coding LOC102003661 starch-binding domain-containing protein 1-like NW_004955421 9799138 9801408 - 102003661 AGCD01021858;XM_013513646 XP_013369100 MODEL 8853668 protein-coding Trappc6b trafficking protein particle complex subunit 6B ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with microcephaly, epilepsy, and brain atrophy (ortholog) NW_004955409 22117329 22131102 + 102015484 AGCD01010017;AGCD01010018;AGCD01010019;AGCD01010020;GBDF01086623;XM_005376885 XP_005376942 MODEL 8865312 protein-coding Pou1f1 POU class 1 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adenohypophysis development (ortholog); B cell differentiation (ortholog); cell fate specification (ortholog); ASSOCIATED WITH combined or isolated pituitary hormone deficiency 1 (ortholog); combined pituitary hormone deficiency (ortholog); combined pituitary hormone deficiency 2 (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955407 5996016 6011483 + 102025654 AGCD01006940;GBDI01038943;XM_005375536 XP_005375593 MODEL 9029450 protein-coding Ccdc107 coiled-coil domain containing 107 NW_004955472 636633 640198 - 102010051 AGCD01053344;GBDI01070373;XM_005401010 XP_005401067 MODEL 8908140 protein-coding Plxna3 plexin A3 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); facial nerve structural organization (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Childhood Schizophrenia (ortholog); disorder of sexual development (ortholog) NW_004955580 958033 972123 + 102004213 AGCD01075633;AGCD01075634;GBBH01068132;XM_005414203 XP_005414260 MODEL 9020287 protein-coding Adgrd2 adhesion G protein-coupled receptor D2 ASSOCIATED WITH polycystic ovary syndrome (ortholog) NW_004955419 3656533 3678452 - 102024231 AGCD01019732;AGCD01019733;GBDF01177352;GBDF01303845;XM_013513083 XP_013368537 MODEL 8771908 protein-coding Sgtb small glutamine rich tetratricopeptide repeat co-chaperone beta ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN protein heterooligomerization (ortholog); protein homooligomerization (ortholog) NW_004955446 3374363 3426284 + 102018871 AGCD01040011;AGCD01040012;AGCD01040013;AGCD01040014;AGCD01040015;GBDF01157752;XM_005392623;XM_005392624 XP_005392680;XP_005392681 MODEL 39133550 mirna MIR532 microRNA 532 8823679 protein-coding Hoxc5 homeobox C5 INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 1288411 1293095 + 102028502 AGCD01047174;GBDJ01115711;XM_005397203 XP_005397260 MODEL 9010237 protein-coding Fn3krp fructosamine 3 kinase related protein NW_004955506 451455 461073 - 102005733 AGCD01065228;GBCQ01066287;XM_005407184 XP_005407241 MODEL 8719435 protein-coding LOC102018242 vomeronasal type-2 receptor 1-like NW_004955448 7059300 7085760 + 102018242 AGCD01041399;AGCD01041400;XM_005393075 XP_005393132 MODEL 8830164 protein-coding Twf1 twinfilin actin binding protein 1 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); ATP binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); conditioned place preference (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH lymphoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cytosol (ortholog) NW_004955500 3050028 3070799 - 102021991 AGCD01063727;AGCD01063728;AGCD01063729;AGCD01063730;GBDI01106674;GBDK01092916;XM_013505631 XP_013361085 MODEL 8773304 pseudo LOC102022608 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform pseudogene NW_004955488 3365733 3367870 - 102022608 AGCD01059574;XM_005404459;XM_005404460;XM_005404461 MODEL 8894099 protein-coding Ntm neurotrimin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cerebellum development (ortholog); negative regulation of glial cell proliferation (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); connective tissue disease (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); excitatory synapse (ortholog) NW_004955412 32779245 33194093 + 102025225 AGCD01013359;AGCD01013360;GBBH01098809;GBDJ01061546;XM_005378573 XP_005378630 MODEL 8723520 protein-coding Plpp4 phospholipid phosphatase 4 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); identical protein binding (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); phospholipid dephosphorylation (ortholog); regulation of calcium ion import (ortholog); ASSOCIATED WITH breast cancer (ortholog) NW_004955551 1328652 1458714 + 102015056 AGCD01072692;AGCD01072693;AGCD01072694;GBDJ01262036;XM_005412174 XP_005412231 MODEL 8919013 protein-coding Hid1 HID1 domain containing INVOLVED IN insulin processing (ortholog); response to glucose (ortholog); secretory granule maturation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 105 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); cytoplasmic side of Golgi membrane (ortholog) NW_004955553 1818215 1839123 - 102017712 AGCD01072900;GBBH01144033;XM_005412264;XM_005412265 XP_005412321;XP_005412322 MODEL 8995680 pseudo LOC102010208 protein kinase C iota type pseudogene NW_004955446 317633 321748 - 102010208 AGCD01039938;XM_005392595 MODEL 9051180 protein-coding LOC102010985 C-type lectin domain family 2 member F-like NW_004955413 7883706 7902234 + 102010985 AGCD01013835;GBDK01420751;XM_013511366;XM_013511367 XP_013366820;XP_013366821 MODEL 8968765 protein-coding Rhbdf1 rhomboid 5 homolog 1 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); negative regulation of protein secretion (ortholog); ASSOCIATED WITH Wolff-Parkinson-White syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955442 17090962 17098068 + 102009327 AGCD01037937;GBDJ01079685;GBDJ01079692;XM_005391681 XP_005391738 MODEL 8915368 protein-coding Atg4c autophagy related 4C cysteine peptidase ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); protein delipidation (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Crohn's disease (ortholog); intellectual disability (ortholog) NW_004955423 26813865 26993308 - 102006590 AGCD01024107;AGCD01024108;AGCD01024109;AGCD01024110;AGCD01024111;AGCD01024112;GBCE01130181;XM_005385332;XM_013514378;XM_013514379;XM_013514380;XM_013514381;XM_013514382;XM_013514384;XR_001234058 XP_005385389;XP_013369832;XP_013369833;XP_013369834;XP_013369835;XP_013369836;XP_013369838 MODEL 8832960 protein-coding Eed embryonic ectoderm development ENCODES a protein that exhibits chromatin binding (ortholog); enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); facultative heterochromatin formation (ortholog); gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Cohen-Gibson Syndrome (ortholog); genetic disease (ortholog); FOUND IN chromatin silencing complex (ortholog); ESC/E(Z) complex (ortholog); nucleoplasm (ortholog) NW_004955414 6659144 6685530 - 102011107 AGCD01014926;GBBH01214076;XM_005379744;XM_013511798 XP_005379801;XP_013367252 MODEL 8794618 protein-coding Gimd1 GIMAP family P-loop NTPase domain containing 1 NW_004955496 3049862 3060961 + 102007133 AGCD01062280;XM_005406216 XP_005406273 MODEL 8793759 pseudo LOC102005395 DNA polymerase delta subunit 4 pseudogene NW_004955425 561831 562286 - 102005395 AGCD01025186 MODEL 8885648 ncrna LOC102012639 uncharacterized LOC102012639 NW_004955415 32915416 32918889 - 102012639 AGCD01016740;GBBH01160712;XR_260334 MODEL 8966638 protein-coding Ptprk protein tyrosine phosphatase receptor type K ENCODES a protein that exhibits beta-catenin binding (ortholog); gamma-catenin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); cellular response to reactive oxygen species (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); melanoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955436 8975742 9371608 - 102012681 AGCD01033755;AGCD01033756;AGCD01033757;AGCD01033758;AGCD01033759;GBBH01167041;XM_013516643 XP_013372097 MODEL 8701687 protein-coding Itfg1 integrin alpha FG-GAP repeat containing 1 NW_004955474 7800984 8020891 + 102010994 AGCD01054530;AGCD01054531;AGCD01054532;AGCD01054533;AGCD01054534;AGCD01054535;AGCD01054536;AGCD01054537;AGCD01054538;AGCD01054539;GBCB01043723;GBDF01119170;XM_005401409 XP_005401466 MODEL 8903020 ncrna LOC102017493 uncharacterized LOC102017493 NW_004955435 11747839 11756443 + 102017493 AGCD01033118;GBDI01366443;XR_261678 MODEL 39133478 snrna U2 U2 spliceosomal RNA 9056618 protein-coding Bcl2l1 BCL2 like 1 ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); clathrin binding (ortholog); INVOLVED IN apoptotic process in bone marrow cell (ortholog); cell population proliferation (ortholog); cellular response to alkaloid (ortholog); PARTICIPATES IN erythropoietin signaling pathway; interleukin-3 signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); centrosome (ortholog); clathrin-coated pit (ortholog) NW_004955422 29254440 29307104 + 102016487 AGCD01023387;AGCD01023388;GBBH01214380;XM_005384894;XM_005384895;XM_005384896;XM_005384897;XM_005384898;XM_005384899;XM_005384900;XM_005384901;XM_005384902 XP_005384951;XP_005384952;XP_005384953;XP_005384954;XP_005384955;XP_005384956;XP_005384957;XP_005384958;XP_005384959 MODEL 8809432 pseudo LOC102018689 thymocyte nuclear protein 1 pseudogene NW_004955454 4953581 4954554 - 102018689 AGCD01045129 MODEL 8740679 protein-coding Per1 period circadian regulator 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); E-box binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); antidepressant type abuse (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955467 8798436 8813369 + 102023995 AGCD01051472;GBDF01050299;XM_005399432;XM_005399433 XP_005399489;XP_005399490 MODEL 10271969 ncrna LOC106147174 uncharacterized LOC106147174 NW_004955524 2359078 2365515 - 106147174 AGCD01068810;AGCD01068811;GBDF01277515;XR_001231952 MODEL 8708772 protein-coding Amotl1 angiomotin like 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of cell polarity involved in ameboidal cell migration (ortholog); positive regulation of blood vessel endothelial cell migration (ortholog); ASSOCIATED WITH Craniofaciocardiohepatic syndrome (ortholog); Disease Progression (ortholog); high grade glioma (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); COP9 signalosome (ortholog) NW_004955605 113570 275921 - 102024076 AGCD01076930;AGCD01076931;AGCD01076932;AGCD01076933;AGCD01076934;AGCD01076935;AGCD01076936;AGCD01076937;AGCD01076938;GBCE01000888;XM_005414888;XM_005414889;XM_005414890;XM_005414891;XM_005414892;XM_013510098 XP_005414945;XP_005414946;XP_005414947;XP_005414948;XP_005414949;XP_013365552 MODEL 8876788 ncrna LOC102024316 uncharacterized LOC102024316 NW_004955410 27120738 27127442 + 102024316 AGCD01011209;GBDJ01019626;XR_259870 MODEL 8895307 pseudo LOC102007200 actin, cytoplasmic 2-like NW_004955409 20791291 20792243 + 102007200 AGCD01009930 MODEL 8764986 protein-coding Wipf2 WAS/WASL interacting protein family member 2 NW_004955451 14821924 14856304 + 102011269 AGCD01043575;AGCD01043576;AGCD01043577;AGCD01043578;GBDI01020357;XM_005394352 XP_005394409 MODEL 8723254 protein-coding Chrdl1 chordin like 1 ENCODES a protein that exhibits BMP binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); BMP signaling pathway (ortholog); cell fate determination (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH genetic disease (ortholog); megalocornea (ortholog); FOUND IN extracellular region (ortholog) NW_004955490 5108308 5218679 + 102006922 AGCD01060203;GBCE01116210;XM_005404651;XM_005404652;XM_005404653;XM_005404654;XM_013504551;XM_013504552 XP_005404708;XP_005404709;XP_005404710;XP_005404711;XP_013360005;XP_013360006 MODEL 8727518 protein-coding Tlcd5 TLC domain containing 5 ASSOCIATED WITH exfoliation syndrome (ortholog) NW_004955412 21344464 21350675 + 102011421 AGCD01013021;GBCE01163283;XM_005378348;XM_005378349;XM_005378350 XP_005378405;XP_005378406;XP_005378407 MODEL 9052404 protein-coding Klhdc2 kelch domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nuclear body (ortholog); nuclear membrane (ortholog) NW_004955409 12901892 12910562 - 102028618 AGCD01009576;GBDF01053830;GBDK01183936;XM_005376836 XP_005376893 MODEL 39133389 snrna U4 U4 spliceosomal RNA 39132222 snrna U6 U6 spliceosomal RNA 10295355 ncrna LOC106150145 uncharacterized LOC106150145 NW_004955466 8514351 8520517 - 106150145 AGCD01050992;GBDK01408031;XR_001236777 MODEL 8837841 protein-coding Gin1 gypsy retrotransposon integrase 1 ASSOCIATED WITH rheumatoid arthritis (ortholog) NW_004955418 10898069 10918460 + 102026007 AGCD01018988;GBCE01042578;XM_005382188;XM_005382189;XM_005382190;XM_005382191 XP_005382245;XP_005382246;XP_005382247;XP_005382248 MODEL 8962795 protein-coding Trappc8 trafficking protein particle complex subunit 8 INVOLVED IN collagen biosynthetic process (ortholog); Golgi organization (ortholog); FOUND IN TRAPP complex (ortholog) NW_004955402 19130393 19223019 - 102019001 AGCD01000547;AGCD01000548;AGCD01000549;GBBH01193692;GBDK01235353;XM_005372745;XM_005372747;XR_001231969 XP_005372802;XP_005372804 MODEL 9038497 protein-coding Aifm2 AIF family member 2, ferroptosis suppressor ENCODES a protein that exhibits DNA binding (ortholog); electron-transferring-flavoprotein dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); cellular detoxification (ortholog); negative regulation of ferroptosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955437 21111298 21126487 + 102016636 AGCD01034898;GBDF01115627;XM_005390068;XM_005390069 XP_005390125;XP_005390126 MODEL 8725928 protein-coding Arhgap1 Rho GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); negative regulation of endocytic recycling (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Premature Aging (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 1378426 1395439 + 102003771 AGCD01022457;GBDF01122966;XM_005384008;XM_013514064 XP_005384065;XP_013369518 MODEL 9058948 protein-coding Ccdc110 coiled-coil domain containing 110 ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955403 23593610 23616959 + 102026278 AGCD01002248;GBCB01008937;XM_005373462 XP_005373519 MODEL 9046582 protein-coding Plxna4 plexin A4 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog) NW_004955410 35281042 35714094 + 102006641 AGCD01011410;AGCD01011411;AGCD01011412;AGCD01011413;GBDF01057223;XM_005377544;XM_005377545;XM_013510647 XP_005377601;XP_005377602;XP_013366101 MODEL 8801941 protein-coding Adgre1 adhesion G protein-coupled receptor E1 INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell periphery (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955495 2601413 2674738 - 102030546 AGCD01061788;AGCD01061789;AGCD01061790;AGCD01061791;AGCD01061792;AGCD01061793;GBBH01172386;GBBH01172387;XM_013505356 XP_013360810 MODEL 405822153 mirna MIR539 microRNA 539 8747425 protein-coding Gpr15lg G protein-coupled receptor 15 ligand ENCODES a protein that exhibits chemokine activity (ortholog); G protein-coupled receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN defense response to fungus (ortholog); defense response to Gram-positive bacterium (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) NW_004955510 3697163 3703108 + 102004098 AGCD01066247;GBCQ01122690;XM_005407881 XP_005407938 MODEL 10342817 protein-coding Exd3 exonuclease 3'-5' domain containing 3 ASSOCIATED WITH epilepsy (ortholog) NW_004955513 5314370 5336052 - 106147039 AGCD01066967;XM_013506584 XP_013362038 MODEL 39131629 rrna 5S_rRNA 5S ribosomal RNA 8712256 protein-coding LOC102022609 putative MAGE domain-containing protein MAGEA13P NW_004955489 6761364 6855797 - 102022609 AGCD01059965;AGCD01059966;AGCD01059967;GBDF01303343;XM_013504466;XM_013504467 XP_013359920;XP_013359921 MODEL 8979708 protein-coding Tspan8 tetraspanin 8 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN negative regulation of blood coagulation (ortholog); regulation of gene expression (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Arterial Occlusive Diseases (ortholog); breast ductal carcinoma (ortholog); FOUND IN cell surface (ortholog) NW_004955405 11200290 11233094 - 102030592 AGCD01004827;GBBH01001841;XM_005374318 XP_005374375 MODEL 8710237 protein-coding Twf2 twinfilin actin binding protein 2 ENCODES a protein that exhibits actin monomer binding (ortholog); ATP binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to retinoic acid (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); filopodium (ortholog); growth cone (ortholog) NW_004955532 3835620 3844760 - 102027109 AGCD01070299;GBBH01064145;XM_013507654;XM_013507655 XP_013363108;XP_013363109 MODEL 9010824 protein-coding Fbln2 fibulin 2 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Weight Gain (ortholog) NW_004955429 12791926 12880544 - 102005161 AGCD01028731;AGCD01028732;AGCD01028733;GBDF01195501;XM_005386977;XM_005386978 XP_005387034;XP_005387035 MODEL 8928418 protein-coding LOC102003664 apoptosis-associated speck-like protein containing a CARD NW_004955493 8053687 8055442 - 102003664 AGCD01061257;GBDF01238687;XM_005405309 XP_005405366 MODEL 8929704 protein-coding Rhbdf2 rhomboid 5 homolog 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN hair cell differentiation (ortholog); hair follicle morphogenesis (ortholog); negative regulation of protein secretion (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatoblastoma (ortholog); palmoplantar keratoderma-esophageal carcinoma syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955506 5805415 5828286 + 102023826 AGCD01065390;GBDK01396584;XM_005407428 XP_005407485 MODEL 8704512 protein-coding Ncdn neurochondrin INVOLVED IN bone resorption (ortholog); neuron projection development (ortholog); regulation of neuronal synaptic plasticity (ortholog); ASSOCIATED WITH Floating-Harbor syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH INFANTILE EPILEPTIC SPASMS (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955452 13650016 13659382 + 102019768 AGCD01044429;GBDF01120972;XM_005395148;XM_005395149;XM_005395150;XM_005395151;XM_013519573 XP_005395205;XP_005395206;XP_005395207;XP_005395208;XP_013375027 MODEL 9003547 protein-coding Atg4d autophagy related 4D cysteine peptidase ENCODES a protein that exhibits cysteine-type exopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); mitophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH cerebellar ataxia (ortholog); familial hypercholesterolemia (ortholog); Liver Reperfusion Injury (ortholog); FOUND IN mitochondrion (ortholog) NW_004955495 1739982 1746362 + 102027874 AGCD01061722;GBCE01064714;GBDF01083821;XM_013505135;XM_013505136;XM_013505137;XM_013505138;XM_013505139;XM_013505140;XM_013505141 XP_013360589;XP_013360590;XP_013360591;XP_013360592;XP_013360593;XP_013360594;XP_013360595 MODEL 9003821 protein-coding Eef1a1 eukaryotic translation elongation factor 1 alpha 1 ENCODES a protein that exhibits calmodulin binding (ortholog); GTPase activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; translation elongation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Burns (ortholog); carcinoma (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955493 8661317 8663190 - 102009516 AGCD01061325;GBBH01000801;GBCE01002384;XM_005405329 XP_005405386 MODEL 8844099 protein-coding Pou2af1 POU class 2 homeobox associating factor 1 ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); positive regulation of interleukin-6 production (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) NW_004955412 13131229 13167150 - 102016035 AGCD01012829;GBDI01222451;XM_005378068;XM_005378069;XM_005378070;XM_005378071;XM_005378072;XM_013511006;XM_013511007 XP_005378125;XP_005378126;XP_005378127;XP_005378128;XP_005378129;XP_013366460;XP_013366461 MODEL 8864220 ncrna LOC102020105 uncharacterized LOC102020105 NW_004955469 5146014 5164443 - 102020105 AGCD01052344;AGCD01052345;GBDF01075348;XR_263431 MODEL 8942912 protein-coding LOC102004714 potassium voltage-gated channel subfamily F member 1 NW_004955487 5789494 5793301 + 102004714 AGCD01059347;XM_005404422 XP_005404479 MODEL 9061205 protein-coding LOC102028836 indolethylamine N-methyltransferase-like NW_004955410 31911807 31918851 - 102028836 AGCD01011333;GBDK01159055;XM_013510498 XP_013365952 MODEL 8751282 protein-coding Itfg2 integrin alpha FG-GAP repeat containing 2 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); KICSTOR complex (ortholog); lysosomal membrane (ortholog) NW_004955429 18356642 18372928 + 102021466 AGCD01028900;GBDI01314591;XM_005387114;XM_005387115 XP_005387171;XP_005387172 MODEL 8749048 protein-coding Sh2b1 SH2B adaptor protein 1 INVOLVED IN cell motility (ortholog); lamellipodium assembly (ortholog); positive regulation of mitotic nuclear division (ortholog); PARTICIPATES IN leptin system pathway; ASSOCIATED WITH chromosome 16p11.2 deletion syndrome, 220-kb (ortholog); obesity (ortholog); Primary Ovarian Failure (ortholog) NW_004955493 6583415 6592690 - 102014577 AGCD01061119;GBBH01065760;XM_005405163;XM_013504844;XM_013504845;XM_013504846;XM_013504847;XM_013504848;XM_013504849 XP_005405220;XP_013360298;XP_013360299;XP_013360300;XP_013360301;XP_013360302;XP_013360303 MODEL 8918055 protein-coding Borcs8 BLOC-1 related complex subunit 8 INVOLVED IN heart development (ortholog); ASSOCIATED WITH NEURODEGENERATION, INFANTILE-ONSET, WITH OPTIC ATROPHY AND BRAIN ABNORMALITIES (ortholog); FOUND IN BORC complex (ortholog) NW_004955524 2641907 2646275 + 102008656 AGCD01068827;GBDF01046628;XM_005409618;XM_005409619;XM_013507215 XP_005409675;XP_005409676;XP_013362669 MODEL 8743582 pseudo LOC102010209 zinc finger CCCH domain-containing protein 15 pseudogene NW_004955446 1347899 1403306 + 102010209 AGCD01039963;AGCD01039964;AGCD01039965 MODEL 8841607 protein-coding Ntmt1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 ENCODES a protein that exhibits histone methyltransferase activity (ortholog); N-terminal protein N-methyltransferase activity (ortholog); protein methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); N-terminal peptidyl-alanine trimethylation (ortholog); N-terminal peptidyl-glycine methylation (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955570 1730407 1747813 + 102019546 AGCD01074826;AGCD01074827;AGCD01074828;GBDJ01394132;XM_005413625;XM_005413626;XM_005413627;XM_013509425;XM_013509426 XP_005413682;XP_005413683;XP_005413684;XP_013364879;XP_013364880 MODEL 9025440 protein-coding Plpp5 phospholipid phosphatase 5 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN phospholipid dephosphorylation (ortholog) NW_004955463 13859492 13864104 - 102023340 AGCD01049892;GBDJ01276219;XM_005398444;XM_005398446 XP_005398501;XP_005398503 MODEL 8792663 protein-coding Trappc9 trafficking protein particle complex subunit 9 INVOLVED IN cerebral cortex development (ortholog); neuron differentiation (ortholog); obsolete positive regulation of NF-kappaB transcription factor activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 13 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); TRAPP complex (ortholog) NW_004955461 13498088 14130159 - 102022477 AGCD01049041;AGCD01049042;AGCD01049043;AGCD01049044;AGCD01049045;AGCD01049046;GBCB01060669;XM_013521331;XM_013521332;XM_013521333;XM_013521334;XM_013521335 XP_013376785;XP_013376786;XP_013376787;XP_013376788;XP_013376789 MODEL 8808126 pseudo LOC102010986 tubulin polyglutamylase complex subunit 2 pseudogene NW_004955468 4276509 4282049 + 102010986 AGCD01051904 MODEL 8762303 pseudo LOC102018690 voltage-dependent anion-selective channel protein 1 pseudogene NW_004955407 3264485 3268366 + 102018690 AGCD01006856;XR_259547 MODEL 10189778 protein-coding LOC106147176 basic proline-rich protein-like NW_004955408 770878 771309 + 106147176 AGCD01007931;GBDI01163505;GBDI01376377;XM_013507281 XP_013362735 MODEL 8757432 protein-coding LOC102012640 cystatin-SA NW_004955415 30607068 30613196 - 102012640 AGCD01016666;XM_005381141 XP_005381198 MODEL 8921295 ncrna LOC102007202 uncharacterized LOC102007202 NW_004955410 35720695 35722354 + 102007202 AGCD01011413;GBDF01055303;XR_259904 MODEL 39132224 snrna U6 U6 spliceosomal RNA 9025092 protein-coding Ptprm protein tyrosine phosphatase receptor type M ENCODES a protein that exhibits cadherin binding (ortholog); identical protein binding (ortholog); phosphatase activity (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell migration (ortholog); ASSOCIATED WITH pancreatic ductal adenocarcinoma (ortholog); schizophrenia (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955402 3243447 3756457 - 102030364 AGCD01000098;AGCD01000099;AGCD01000100;AGCD01000101;AGCD01000102;AGCD01000103;GBBH01229558;GBCE01153361;XM_005372618 XP_005372675 MODEL 8835678 protein-coding Tldc2 TBC/LysM-associated domain containing 2 INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog) NW_004955422 24781476 24795112 - 102018842 AGCD01023235;AGCD01023236;GBBH01208237;XM_005384726;XM_013514016;XM_013514017;XM_013514018;XM_013514020 XP_005384783;XP_013369470;XP_013369471;XP_013369472;XP_013369474 MODEL 8739702 protein-coding Fbln5 fibulin 5 ENCODES a protein that exhibits integrin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN elastic fiber assembly (ortholog); extracellular matrix organization (ortholog); intramembranous bone growth (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); age related macular degeneration (ortholog); age related macular degeneration 1 (ortholog); FOUND IN elastic fiber (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) NW_004955438 14073927 14144644 - 102020715 AGCD01035327;AGCD01035328;GBCQ01011761;XM_005390308;XM_005390309;XM_005390310;XM_005390311 XP_005390365;XP_005390366;XP_005390367;XP_005390368 MODEL 10203571 pseudo LOC106150146 heterogeneous nuclear ribonucleoproteins A2/B1-like NW_004955466 12253833 12254265 + 106150146 AGCD01051116 MODEL 39133855 misc_rna 7SK 7SK RNA 39133479 snrna U2 U2 spliceosomal RNA 8795844 protein-coding Fnbp1 formin binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development (ortholog); FOUND IN plasma membrane (ortholog) NW_004955513 86004 137631 - 102020597 AGCD01066814;GBCQ01067279;GBDJ01176334;XM_013506667;XM_013506668;XM_013506669;XM_013506670;XM_013506671;XM_013506672 XP_013362121;XP_013362122;XP_013362123;XP_013362124;XP_013362125;XP_013362126 MODEL 8904270 protein-coding Ginm1 glycosylated integral membrane protein 1 NW_004955439 11661013 11688004 - 102025289 AGCD01035917;AGCD01035918;AGCD01035919;GBCQ01062223;XM_013517382 XP_013372836 MODEL 8758464 protein-coding Hif1a hypoxia inducible factor 1 subunit alpha ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN acute-phase response (ortholog); angiogenesis (ortholog); axonal transport of mitochondrion (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute-Phase Reaction (ortholog); alcohol-associated liver disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955466 8000311 8022497 - 102020229 AGCD01050976;GBDK01013545;XM_013521981 XP_013377435 MODEL 8768925 protein-coding Doc2b double C2 domain beta ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); syntaxin binding (ortholog); INVOLVED IN calcium ion-regulated exocytosis of neurotransmitter (ortholog); calcium-dependent activation of synaptic vesicle fusion (ortholog); exocytosis (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog) NW_004955481 1839894 1859733 - 102005806 AGCD01056855;GBCE01013418;GBCE01013419;XM_005402918 XP_005402975 MODEL 8759575 protein-coding Bcl2l11 BCL2 like 11 ENCODES a protein that exhibits dynein complex binding (ortholog); microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic process involved in embryonic digit morphogenesis (ortholog); B cell homeostasis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Familial Prostate Cancer (ortholog); glomerulonephritis (ortholog); sclerosing cholangitis (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); BIM-BCL-2 complex (ortholog); BIM-BCL-xl complex (ortholog) NW_004955470 2740682 2780225 - 102004270 AGCD01052681;GBCQ01129618;GBDF01162654;XM_013522758;XM_013522760;XM_013522761;XM_013522762 XP_013378212;XP_013378214;XP_013378215;XP_013378216 MODEL 8755022 protein-coding Arhgap10 Rho GTPase activating protein 10 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog) NW_004955471 2757063 3052565 + 102022381 AGCD01053046;AGCD01053047;AGCD01053048;AGCD01053049;AGCD01053050;AGCD01053051;AGCD01053052;GBDF01214681;XM_013522864 XP_013378318 MODEL 8757763 protein-coding Plxnb1 plexin B1 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN inhibitory synapse assembly (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of osteoblast proliferation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) NW_004955532 471652 499525 - 102024379 AGCD01070126;AGCD01070127;GBDI01012767;XM_005410146;XM_005410147;XM_013507607 XP_005410203;XP_005410204;XP_013363061 MODEL 8841654 protein-coding LOC102022610 olfactory receptor 10AC1-like NW_004955491 70906 72516 - 102022610 AGCD01060319;GBDF01160348;XM_005404876 XP_005404933 MODEL 8702712 protein-coding Per2 period circadian regulator 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); advanced sleep phase syndrome 1 (ortholog); alcohol dependence (ortholog); FOUND IN Cry-Per complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955542 2331547 2369011 + 102025287 AGCD01071518;AGCD01071519;GBBH01061747;GBDI01080968;XM_005411189 XP_005411246 MODEL 8781043 protein-coding Amotl2 angiomotin like 2 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN endothelial cell morphogenesis (ortholog); hippo signaling (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) NW_004955501 4192339 4209150 + 102024137 AGCD01064115;GBDF01307407;XM_005406800;XM_013505791 XP_005406857;XP_013361245 MODEL 8707394 pseudo LOC102017496 protein SCAF11-like NW_004955529 791404 796397 + 102017496 AGCD01069657;AGCD01069658 MODEL 8872017 ncrna LOC102004356 uncharacterized LOC102004356 NW_004955408 16637908 16665694 - 102004356 AGCD01008442;GBDF01308085;XR_259690 MODEL 8710397 protein-coding Chrdl2 chordin like 2 INVOLVED IN cell differentiation (ortholog); negative regulation of BMP signaling pathway (ortholog) NW_004955414 16986199 17018166 + 102005586 AGCD01015232;AGCD01015233;GBDJ01311671;XM_005379912;XM_005379913 XP_005379969;XP_005379970 MODEL 8937997 protein-coding Hoxc6 homeobox C6 INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 1284351 1288391 + 102028830 AGCD01047174;GBDJ01348298;XM_013521013 XP_013376467 MODEL 8791315 protein-coding LOC102018249 nuclear RNA export factor 2-like NW_004956329 1022 3854 - 102018249 AGCD01079439;GBDK01180906;XM_005415196 XP_005415253 MODEL 8724809 protein-coding Pou2af2 POU class 2 homeobox associating factor 2 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); transcription coactivator activity (ortholog); FOUND IN nucleus (ortholog) NW_004955412 13076854 13079095 + 102015300 AGCD01012827;AGCD01012828;GBCE01163326;XM_013511187 XP_013366641 MODEL 9052289 protein-coding Ccdc112 coiled-coil domain containing 112 FOUND IN centriolar satellite (ortholog) NW_004955408 35052985 35069032 - 102021853 AGCD01008929;GBCB01026249;GBCE01162945;XM_005415358;XM_013506914 XP_005415415;XP_013362368 MODEL 39131630 rrna 5S_rRNA 5S ribosomal RNA 8989405 protein-coding Sh2b2 SH2B adaptor protein 2 ENCODES a protein that exhibits SH2 domain binding (ortholog); signaling adaptor activity (ortholog); transmembrane receptor protein tyrosine kinase adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); antigen receptor-mediated signaling pathway (ortholog); B cell receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; FOUND IN actin filament (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955456 15253711 15265874 - 102016564 AGCD01046665;AGCD01046666;GBCB01101553;GBDI01137601;XM_013520635 XP_013376089 MODEL 8852099 ncrna LOC102024319 uncharacterized LOC102024319 NW_004955411 4969494 4972069 - 102024319 AGCD01011592;XR_259917 MODEL 8887516 protein-coding Plpp6 phospholipid phosphatase 6 ENCODES a protein that exhibits hydrolase activity (ortholog); isoprenoid diphosphate phosphatase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); farnesyl diphosphate catabolic process (ortholog); geranyl diphosphate metabolic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) NW_004955434 8953069 8955866 + 102024606 AGCD01032281;GBCE01162872;XM_005415386 XP_005415443 MODEL 8922723 protein-coding Wipf3 WAS/WASL interacting protein family member 3 ENCODES a protein that exhibits SH3 domain binding (ortholog); FOUND IN synapse (ortholog) NW_004955410 31166874 31227377 + 102027826 AGCD01011317;AGCD01011318;GBCQ01031184;XM_013510497 XP_013365951 MODEL 8862774 protein-coding Klhdc3 kelch domain containing 3 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN chromatin (ortholog); Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955437 8989671 8995845 + 102028130 AGCD01034512;GBDK01093172;XM_005389738 XP_005389795 MODEL 8773708 protein-coding Tspan9 tetraspanin 9 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN collagen-activated tyrosine kinase receptor signaling pathway (ortholog); mitocytosis (ortholog); neutrophil homeostasis (ortholog); FOUND IN extracellular matrix (ortholog); membrane (ortholog); migrasome (ortholog) NW_004955429 18696528 18772593 + 102026660 AGCD01028921;GBDF01307566;XM_005387133 XP_005387190 MODEL 8847508 pseudo LOC102018692 coiled-coil domain-containing protein 152-like NW_004955457 9051097 9052057 + 102018692 AGCD01046927 MODEL 8881787 protein-coding Nceh1 neutral cholesterol ester hydrolase 1 ENCODES a protein that exhibits phosphate ion binding (ortholog); serine hydrolase activity (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); protein dephosphorylation (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); FOUND IN membrane (ortholog) NW_004955420 2666905 2725814 - 102003242 AGCD01020605;AGCD01020606;AGCD01020607;GBCE01007233;XM_005383012;XM_013513556 XP_005383069;XP_013369010 MODEL 8970657 protein-coding Atg5 autophagy related 5 ENCODES a protein that exhibits Atg8-family ligase activity (ortholog); INVOLVED IN aggrephagy (ortholog); antigen processing and presentation of endogenous antigen (ortholog); autophagosome assembly (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); anemia (ortholog); autosomal recessive spinocerebellar ataxia 25 (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); axon (ortholog) NW_004955411 31501191 31646407 - 102005783 AGCD01012273;AGCD01012274;AGCD01012275;AGCD01012276;GBDI01366371;XM_005377828;XM_013510873;XM_013510874;XM_013510875;XM_013510876 XP_005377885;XP_013366327;XP_013366328;XP_013366329;XP_013366330 MODEL 8830812 protein-coding LOC102020107 translation initiation factor IF-2-like NW_004955414 25453079 25458691 - 102020107 AGCD01015607;GBCE01049567;XM_005380526 XP_005380583 MODEL 8701675 protein-coding Eef1a2 eukaryotic translation elongation factor 1 alpha 2 ENCODES a protein that exhibits protein kinase binding (ortholog); translation elongation factor activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of lipid kinase activity (ortholog); regulation of postsynaptic specialization assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 38 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); eukaryotic translation elongation factor 1 complex (ortholog) NW_004955528 717338 726383 + 102010729 AGCD01069544;AGCD01069545;GBCB01005764;GBDF01110613;XM_005409964 XP_005410021 MODEL 8838885 pseudo LOC102007204 IST1 homolog pseudogene NW_004955463 5955659 5975823 - 102007204 AGCD01049650;AGCD01049651;AGCD01049652 MODEL 9060574 ncrna LOC102028841 uncharacterized LOC102028841 NW_004955465 11698092 11699855 - 102028841 AGCD01050531;GBDK01348327;XR_263270 MODEL 8927276 ncrna LOC102004716 uncharacterized LOC102004716 NW_004955421 23128250 23159410 + 102004716 AGCD01022173;GBDF01053857;XR_001233869;XR_260817 MODEL 126903067 mirna MIR542 microRNA 542 9061104 protein-coding Itga1 integrin subunit alpha 1 ENCODES a protein that exhibits collagen binding (ortholog); collagen binding involved in cell-matrix adhesion (ortholog); phosphatase activator activity (ortholog); INVOLVED IN cell adhesion (ortholog); cell chemotaxis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; myocardial infarction pathway; ASSOCIATED WITH arteriosclerosis (ortholog); breast cancer (ortholog); COVID-19 (ortholog); FOUND IN cell surface; acrosomal vesicle (ortholog); basal part of cell (ortholog) NW_004955446 14439571 14582236 - 102027124 AGCD01040278;AGCD01040279;GBCQ01124635;XM_005392727;XM_013518440;XM_013518441 XP_005392784;XP_013373894;XP_013373895 MODEL 8733917 protein-coding Fbln7 fibulin 7 ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) NW_004955470 1950806 1981308 - 102028178 AGCD01052665;AGCD01052666;GBDI01387098;XM_005400608 XP_005400665 MODEL 8720095 protein-coding Bpgm bisphosphoglycerate mutase ENCODES a protein that exhibits bisphosphoglycerate mutase activity (ortholog); INVOLVED IN cellular response to stress (ortholog); defense response to protozoan (ortholog); erythrocyte development (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH familial erythrocytosis 8 (ortholog) NW_004955494 7867295 7889440 - 102019610 AGCD01061558;GBBH01208829;XM_005405507;XM_005405508;XM_013505024 XP_005405564;XP_005405565;XP_013360478 MODEL 8774641 protein-coding Exo1 exonuclease 1 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN DNA recombination (ortholog); DNA strand resection involved in replication fork processing (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; mismatch repair pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 10248981 10276207 - 102016665 AGCD01005851;GBDF01014333;XM_005374813;XM_005374814;XM_005374815;XM_013520497;XM_013520501 XP_005374870;XP_005374871;XP_005374872;XP_013375951;XP_013375955 MODEL 8879498 protein-coding LOC102010210 transmembrane protease serine 11A NW_004955447 4915932 4966492 + 102010210 AGCD01040736;GBDI01055640;XM_005392828 XP_005392885 MODEL 8867065 protein-coding Ntmt2 N-terminal Xaa-Pro-Lys N-methyltransferase 2 ENCODES a protein that exhibits N-terminal protein N-methyltransferase activity (ortholog); INVOLVED IN N-terminal protein amino acid methylation (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN nucleus (ortholog) NW_004955462 6450063 6473919 + 102005679 AGCD01049283;GBCB01076101;XM_005398170 XP_005398227 MODEL 9061955 protein-coding Twist1 twist family bHLH transcription factor 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); bone development (ortholog); cardiac neural crest cell development involved in outflow tract morphogenesis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acrocephalosyndactylia (ortholog); anaplastic large cell lymphoma (ortholog); breast cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955410 22003981 22005483 - 102027824 AGCD01011066;GBCE01029839;GBDI01384605;XM_005377354 XP_005377411 MODEL 8745259 protein-coding Arhgap11a Rho GTPase activating protein 11A ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955416 1916475 1936404 - 102028413 AGCD01016841;GBDI01338615;XM_005381178;XM_013512665 XP_005381235;XP_013368119 MODEL 10304380 protein-coding LOC106147177 extensin-like NW_004955408 1006477 1012375 - 106147177 AGCD01007947;AGCD01007948;GBDF01080268;GBDK01258042;XM_013507289 XP_013362743 MODEL 39133391 snrna U4 U4 spliceosomal RNA 8720634 protein-coding Avpr2 arginine vasopressin receptor 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of urine volume (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH cardiomyopathy (ortholog); congenital adrenal hyperplasia (ortholog); congestive heart failure (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955580 583827 586739 + 102021498 AGCD01075613;GBCQ01038848;XM_005414164;XM_005414165;XM_005414166;XM_005414167;XM_013509695;XM_013509696;XM_013509697;XM_013509698;XM_013509699;XM_013509700 XP_005414221;XP_005414222;XP_005414223;XP_005414224;XP_013365149;XP_013365150;XP_013365151;XP_013365152;XP_013365153;XP_013365154 MODEL 8876895 protein-coding Trarg1 trafficking regulator of GLUT4 (SLC2A4) 1 INVOLVED IN cellular response to insulin stimulus (ortholog); endosome to plasma membrane protein transport (ortholog); glucose import in response to insulin stimulus (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955481 2775426 2789929 + 102029742 AGCD01056884;GBCE01105605;XM_005402650 XP_005402707 MODEL 8975061 protein-coding Plxnb2 plexin B2 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN brain development (ortholog); excitatory synapse assembly (ortholog); homophilic cell-cell adhesion (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 33297617 33314371 - 102025673 AGCD01014662;GBDI01012765;GBDJ01023023;XM_005379555 XP_005379612 MODEL 39131504 protein-coding TMEM81 transmembrane protein 81 39132228 snrna U6 U6 spliceosomal RNA 8804791 protein-coding Per3 period circadian regulator 3 ENCODES a protein that exhibits kinase binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN circadian rhythm (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); protein stabilization (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); advanced sleep phase syndrome 1 (ortholog); advanced sleep phase syndrome 3 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955486 5058602 5101480 - 102004823 AGCD01059074;AGCD01059075;GBDI01066498;XM_005404069;XM_005404070;XM_013504262;XM_013504263;XM_013504264 XP_005404126;XP_005404127;XP_013359716;XP_013359717;XP_013359718 MODEL 8909167 protein-coding Aifm3 AIF family member 3 INVOLVED IN execution phase of apoptosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955442 19334217 19346438 - 102022641 AGCD01038052;GBDF01149481;XM_005391824;XM_005391825;XM_005391827;XM_005391828;XM_005391831 XP_005391881;XP_005391882;XP_005391884;XP_005391885;XP_005391888 MODEL 9003686 protein-coding Adgre3 adhesion G protein-coupled receptor E3 NW_004955495 2512391 2565069 - 102029758 AGCD01061781;AGCD01061782;GBBH01189687;XM_005405683;XM_005405684;XM_013505366;XM_013505367 XP_005405740;XP_005405741;XP_013360820;XP_013360821 MODEL 8735196 protein-coding Gpr160 G protein-coupled receptor 160 FOUND IN plasma membrane (ortholog); receptor complex (ortholog) NW_004955420 295670 354872 + 102018400 AGCD01020540;AGCD01020541;GBDI01227916;XM_005382977;XM_013513441;XM_013513442;XM_013513443;XR_001233719 XP_005383034;XP_013368895;XP_013368896;XP_013368897 MODEL 8962793 pseudo LOC102018254 eukaryotic translation initiation factor 1 pseudogene NW_004955452 16336794 16337133 + 102018254 AGCD01044507 MODEL 8856041 protein-coding Ptprn protein tyrosine phosphatase receptor type N ENCODES a protein that exhibits GTPase binding (ortholog); spectrin binding (ortholog); ubiquitin-like protein ligase binding (ortholog); INVOLVED IN dense core granule maturation (ortholog); insulin secretion (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); Experimental Diabetes Mellitus (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN axon terminus (ortholog); endosome (ortholog); Golgi apparatus (ortholog) NW_004955453 14126416 14145347 + 102008815 AGCD01044858;GBBH01175455;XM_005395533;XM_005395534;XM_005395537 XP_005395590;XP_005395591;XP_005395594 MODEL 39133856 misc_rna 7SK 7SK RNA 10103955 protein-coding LOC106150147 basic proline-rich protein-like NW_004955466 13485586 13540725 + 106150147 AGCD01051160;AGCD01051161;GBDI01214644;XM_013521885 XP_013377339 MODEL 39133480 snrna U2 U2 spliceosomal RNA 8966592 protein-coding Pou2af3 POU class 2 homeobox associating factor 3 ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955412 13090206 13098642 + 102012297 AGCD01012829;GBBH01143846;GBCE01075437;XM_013511188 XP_013366642 MODEL 8730951 protein-coding Ncf1 neutrophil cytosolic factor 1 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular defense response (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); autosomal recessive chronic granulomatous disease 1 (ortholog); autosomal recessive chronic granulomatous disease 2 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955456 13353780 13363956 - 102014744 AGCD01046587;GBDI01081905;XM_005396736 XP_005396793 MODEL 8923953 protein-coding Gins1 GINS complex subunit 1 INVOLVED IN DNA replication (ortholog); inner cell mass cell proliferation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); immunodeficiency 55 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955415 31341021 31363069 + 102012533 AGCD01016674;GBDF01124614;XM_005380994 XP_005381051 MODEL 8713347 protein-coding Eef1akmt1 EEF1A lysine methyltransferase 1 ENCODES a protein that exhibits methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine methylation (ortholog) NW_004955497 1509855 1540786 - 102012103 AGCD01062464;AGCD01062465;GBDK01144753;XM_005406311;XM_013505465 XP_005406368;XP_013360919 MODEL 8875630 protein-coding Dock1 dedicator of cytokinesis 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cell migration (ortholog); hematopoietic progenitor cell differentiation (ortholog); positive regulation of epithelial cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); DiGeorge syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); guanyl-nucleotide exchange factor complex (ortholog) NW_004955477 4725780 5243812 + 102013169 AGCD01055586;AGCD01055587;AGCD01055588;AGCD01055589;AGCD01055590;AGCD01055591;GBCE01169484;XM_005402009;XM_005402010;XM_013503070 XP_005402066;XP_005402067;XP_013358524 MODEL 10200341 pseudo LOC102010988 Ig heavy chain V-I region 5-like NW_004955470 403274 403787 - 102010988 AGCD01052609 MODEL 8817316 protein-coding Bcl2l12 BCL2 like 12 ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cellular senescence (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); FOUND IN nucleus (ortholog) NW_004955559 1217797 1224875 - 102011055 AGCD01073636;AGCD01073637;GBDF01137503;XM_013508948 XP_013364402 MODEL 8941333 protein-coding LOC102028842 olfactory receptor 8D4 NW_004955412 24557873 24558811 + 102028842 AGCD01013117;XM_005378404 XP_005378461 MODEL 39131631 rrna 5S_rRNA 5S ribosomal RNA 8726374 protein-coding LOC102022613 uncharacterized LOC102022613 NW_004955494 2980579 2986183 - 102022613 AGCD01061458;GBDF01238692;XM_005405425 XP_005405482 MODEL 8712490 pseudo LOC102004357 transcription elongation factor SPT4-A-like NW_004955457 12370358 12370718 + 102004357 AGCD01047009 MODEL 8988504 protein-coding Ampd1 adenosine monophosphate deaminase 1 ENCODES a protein that exhibits AMP deaminase activity (ortholog); identical protein binding (ortholog); myosin heavy chain binding (ortholog); INVOLVED IN GMP salvage (ortholog); IMP salvage (ortholog); response to ATP (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Adenosine Monophosphate Deaminase Deficiency (ortholog); autistic disorder (ortholog); congestive heart failure (ortholog) NW_004955435 17962487 17991625 - 102019839 AGCD01033379;AGCD01033380;AGCD01033381;GBCB01001199;XM_005389004;XM_005389005;XM_005389006 XP_005389061;XP_005389062;XP_005389063 MODEL 8729790 protein-coding Plpp7 phospholipid phosphatase 7 (inactive) INVOLVED IN negative regulation of myotube differentiation (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955513 1081748 1092025 + 102021379 AGCD01066840;AGCD01066841;GBCB01005805;XM_005408361 XP_005408418 MODEL 8730108 protein-coding Hif1an hypoxia inducible factor 1 subunit alpha inhibitor ENCODES a protein that exhibits [protein]-asparagine 3-dioxygenase activity (ortholog); ankyrin repeat binding (ortholog); carboxylic acid binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of myoblast differentiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955485 9592106 9602019 - 102008227 AGCD01058774;GBDF01050891;XM_005403904 XP_005403961 MODEL 8968235 protein-coding Fnbp1l formin binding protein 1 like ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN cilium assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955423 1115828 1220316 - 102014145 AGCD01023428;AGCD01023429;AGCD01023430;GBDJ01272685;XM_005385016;XM_005385017;XM_013514438 XP_005385073;XP_005385074;XP_013369892 MODEL 8714779 protein-coding Ccdc116 coiled-coil domain containing 116 ASSOCIATED WITH lung cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955442 17474743 17482389 - 102016317 AGCD01037955;GBDF01021116;XM_005391705;XM_005391707;XM_005391708;XM_013518019 XP_005391762;XP_005391764;XP_005391765;XP_013373473 MODEL 8998264 protein-coding Rhbdl1 rhomboid like 1 NW_004955442 16525009 16528780 - 102021604 AGCD01037901;GBDF01194169;XM_005391625;XM_005391626;XM_005391627;XM_013517764;XM_013517765;XM_013517766 XP_005391682;XP_005391683;XP_005391684;XP_013373218;XP_013373219;XP_013373220 MODEL 8868589 protein-coding Sh2b3 SH2B adaptor protein 3 ENCODES a protein that exhibits phosphate ion binding (ortholog); protein tyrosine kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to chemokine (ortholog); cellular response to interleukin-3 (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); chronic myeloid leukemia (ortholog); colorectal cancer (ortholog) NW_004955482 8079905 8100791 + 102006034 AGCD01057503;GBDI01138139;XM_013503649 XP_013359103 MODEL 8719548 protein-coding Twist2 twist family bHLH transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN cornea development in camera-type eye (ortholog); embryonic cranial skeleton morphogenesis (ortholog); face morphogenesis (ortholog); ASSOCIATED WITH ablepharon macrostomia syndrome (ortholog); Barber-Say syndrome (ortholog); Focal Facial Dermal Dysplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955542 1959765 2000665 - 102023744 AGCD01071509;GBBH01091431;GBCE01029840;XM_005411181 XP_005411238 MODEL 8806374 protein-coding Chrm1 cholinergic receptor muscarinic 1 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN entrainment of circadian clock (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); neuromuscular synaptic transmission (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH asthma (ortholog); brain ischemia (ortholog); epilepsy (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); cholinergic synapse (ortholog) NW_004955599 349744 356714 + 102004442 AGCD01076640;GBDF01252230;GBDI01253861;XM_013510063 XP_013365517 MODEL 8964229 protein-coding LOC102017503 core histone macro-H2A.2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN brain development (ortholog); dosage compensation by inactivation of X chromosome (ortholog); establishment of protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN Barr body (ortholog); chromatin (ortholog); nucleoplasm (ortholog) NW_004955437 21126581 21186308 - 102017503 AGCD01034898;AGCD01034899;AGCD01034900;AGCD01034901;AGCD01034902;AGCD01034903;AGCD01034904;AGCD01034905;GBDJ01420059;XM_005390070 XP_005390127 MODEL 8961483 ncrna LOC102018695 uncharacterized LOC102018695 NW_004955458 9885317 9887026 - 102018695 AGCD01047664;GBDK01334184;XR_262992 MODEL 8759728 protein-coding Tspear thrombospondin type laminin G domain and EAR repeats INVOLVED IN hair cycle process (ortholog); Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 98 (ortholog); ectodermal dysplasia 14 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); ciliary membrane (ortholog); stereocilium (ortholog) NW_004955407 41513538 41566931 - 102009147 AGCD01007870;GBDJ01386456;XM_013506099 XP_013361553 MODEL 9032136 protein-coding Arhgap12 Rho GTPase activating protein 12 INVOLVED IN actin filament organization (ortholog); morphogenesis of an epithelial sheet (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN glutamatergic synapse (ortholog); phagocytic cup (ortholog); postsynapse (ortholog) NW_004955429 23452880 23560948 - 102030222 AGCD01029068;AGCD01029069;AGCD01029070;AGCD01029071;AGCD01029072;GBCQ01067381;XM_013515440;XM_013515441;XM_013515442;XM_013515443;XM_013515444 XP_013370894;XP_013370895;XP_013370896;XP_013370897;XP_013370898 MODEL 8903401 protein-coding Tle1 TLE family member 1, transcriptional corepressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of anoikis (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955530 1936936 2028803 + 102008658 AGCD01069903;AGCD01069904;GBBH01187430;GBCB01002607;XM_005410111;XM_005410112;XM_005410113;XM_005410114;XM_013507549 XP_005410168;XP_005410169;XP_005410170;XP_005410171;XP_013363003 MODEL 8718050 protein-coding Awat1 acyl-CoA wax alcohol acyltransferase 1 ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway NW_004955475 9780080 9785675 + 102021337 AGCD01055075;GBCE01147851;XM_005401614 XP_005401671 MODEL 39131310 protein-coding TRAV22 T cell receptor alpha variable 22 8837272 protein-coding Hoxc8 homeobox C8 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron differentiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955458 1267247 1271354 + 102029371 AGCD01047173;GBCB01091797;XM_005397206 XP_005397263 MODEL 39132230 snrna U6 U6 spliceosomal RNA 8759866 protein-coding Atg7 autophagy related 7 ENCODES a protein that exhibits Atg12 activating enzyme activity (ortholog); Atg8 activating enzyme activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adult walking behavior (ortholog); autophagosome assembly (ortholog); autophagy (ortholog); PARTICIPATES IN autophagy pathway; mitochondrial autophagy pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); alcoholic cardiomyopathy (ortholog); alcoholic hepatitis (ortholog); FOUND IN axon (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955429 14076976 14301034 + 102016501 AGCD01028775;AGCD01028776;AGCD01028777;AGCD01028778;GBBH01050748;XM_005387012 XP_005387069 MODEL 8902202 protein-coding LOC102004721 UDP-N-acetylglucosamine transferase subunit ALG13 homolog NW_004955493 8103019 8104261 - 102004721 AGCD01061265;GBDF01238027;XM_005405313 XP_005405370 MODEL 8739347 protein-coding LOC102007206 histone H2A type 1 NW_004955465 13392074 13392621 - 102007206 AGCD01050607;XM_005398951 XP_005399008 MODEL 8782965 protein-coding Bphl biphenyl hydrolase like ENCODES a protein that exhibits alpha-amino-acid esterase activity (ortholog); serine hydrolase activity (ortholog); INVOLVED IN homocysteine metabolic process (ortholog); xenobiotic metabolic process (ortholog); FOUND IN mitochondrion (ortholog) NW_004955465 10093342 10120588 - 102017109 AGCD01050501;AGCD01050502;GBCQ01001027;XM_005398902;XM_005398903;XM_013521831 XP_005398959;XP_005398960;XP_013377285 MODEL 8965993 protein-coding Fbn1 fibrillin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix structural constituent (ortholog); heparin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); camera-type eye development (ortholog); cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH achondroplasia (ortholog); acromicric dysplasia (ortholog); Albuminuria (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955409 5281603 5502547 + 102011181 AGCD01009312;AGCD01009313;AGCD01009314;AGCD01009315;AGCD01009316;GBBH01026321;GBCE01153176;JN632848;XM_005376698 XP_005376755 MODEL 10270928 protein-coding LOC106150148 translation initiation factor IF-2-like NW_004955466 889203 889874 + 106150148 AGCD01050681;GBBH01210034;XM_013521886 XP_013377340 MODEL 9053255 protein-coding LOC102024325 olfactory receptor 149 NW_004955412 24877990 24878925 + 102024325 AGCD01013130;XM_005378640 XP_005378697 MODEL 8936684 protein-coding Exo5 exonuclease 5 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); single-stranded DNA 5'-3' DNA exonuclease activity (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955537 328608 334559 + 102027456 AGCD01070861;AGCD01070862;GBDF01041249;XM_005410561;XM_005410569;XM_005410570;XM_013507800;XM_013507801;XM_013507802;XM_013507803 XP_005410618;XP_005410626;XP_005410627;XP_013363254;XP_013363255;XP_013363256;XP_013363257 MODEL 8728744 protein-coding Fnbp4 formin binding protein 4 FOUND IN nucleoplasm (ortholog) NW_004955422 613817 641691 + 102006145 AGCD01022422;AGCD01022423;AGCD01022424;GBCB01056703;GBDJ01016812;XM_013514047 XP_013369501 MODEL 10165570 ncrna LOC106147178 uncharacterized LOC106147178 NW_004955524 3048411 3053940 - 106147178 AGCD01068853;GBDF01277738;XR_001231953 MODEL 8899534 protein-coding Pou2f1 POU class 2 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN lens induction in camera-type eye (ortholog); liver regeneration (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN forkhead class A signaling pathway; RNA polymerase III transcription pathway; FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog); transcription regulator complex (ortholog) NW_004955462 9545122 9710190 - 102024535 AGCD01049339;AGCD01049340;AGCD01049341;AGCD01049342;GBDJ01116013;XM_005398227;XM_005398228;XM_005398229;XM_005398232;XM_013521422 XP_005398284;XP_005398285;XP_005398286;XP_005398289;XP_013376876 MODEL 8880862 protein-coding Klhdc4 kelch domain containing 4 NW_004955541 2026554 2065627 - 102027787 AGCD01071398;AGCD01071399;GBDJ01276056;XM_005411006;XM_005411007 XP_005411063;XP_005411064 MODEL 8929159 protein-coding Bcl2l13 BCL2 like 13 INVOLVED IN apoptotic process (ortholog); ATP biosynthetic process (ortholog); canonical glycolysis (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) NW_004955454 5692027 5770897 + 102004892 AGCD01045182;AGCD01045183;AGCD01045184;AGCD01045185;AGCD01045186;AGCD01045187;GBDJ01295690;XM_005395979;XM_005395980;XM_013520178;XM_013520179;XM_013520180;XM_013520181 XP_005396036;XP_005396037;XP_013375632;XP_013375633;XP_013375634;XP_013375635 MODEL 8949450 protein-coding Dock10 dedicator of cytokinesis 10 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); dendritic spine morphogenesis (ortholog); marginal zone B cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955453 9229535 9424570 + 102017626 AGCD01044769;AGCD01044770;GBCE01142037;XM_005395477;XM_005395478;XM_005395479;XM_013519949;XM_013519950;XM_013519951;XM_013519952 XP_005395534;XP_005395535;XP_005395536;XP_013375403;XP_013375404;XP_013375405;XP_013375406 MODEL 8862543 pseudo LOC102020109 E3 ubiquitin-protein ligase RBX1 pseudogene NW_004955415 8171865 8172300 + 102020109 AGCD01016065;XR_260275 MODEL 9015212 protein-coding Plxnb3 plexin B3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); protein domain specific binding (ortholog); Rho GDP-dissociation inhibitor binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); homophilic cell-cell adhesion (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cell surface (ortholog) NW_004955580 482602 495628 + 102016653 AGCD01075607;GBBH01163823;XM_005414143;XM_013509679;XM_013509680;XM_013509681;XM_013509682;XM_013509683;XM_013509684;XM_013509685;XM_013509686;XM_013509687;XR_001232477 XP_005414200;XP_013365133;XP_013365134;XP_013365135;XP_013365136;XP_013365137;XP_013365138;XP_013365139;XP_013365140;XP_013365141 MODEL 9038850 ncrna LOC102004359 uncharacterized LOC102004359 NW_004955409 13531193 13534835 + 102004359 AGCD01009612;GBDF01214064;XR_259783 MODEL 41410900 mirna MIR544A microRNA 544a 9016186 pseudo LOC102018255 ubiquitin-60S ribosomal protein L40 pseudogene NW_004955405 9748083 9748858 - 102018255 AGCD01004792 MODEL 39133857 misc_rna 7SK 7SK RNA 8717483 protein-coding Gpr161 G protein-coupled receptor 161 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cerebellum development (ortholog); forebrain development (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); medulloblastoma (ortholog); Pituitary Stalk Interruption Syndrome (ortholog); FOUND IN cilium (ortholog); non-motile cilium membrane (ortholog); recycling endosome (ortholog) NW_004955462 8981729 9034009 + 102019895 AGCD01049331;AGCD01049332;GBDF01156462;XM_005398214;XM_005398215;XM_005398216;XM_005398217;XM_005398218;XM_005398219;XM_013521419;XM_013521420 XP_005398271;XP_005398272;XP_005398273;XP_005398274;XP_005398275;XP_005398276;XP_013376873;XP_013376874 MODEL 8843904 protein-coding Adgre5 adhesion G protein-coupled receptor E5 INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH lung disease (ortholog); pancreatic cancer (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955415 33007959 33021896 + 102013716 AGCD01016746;GBDF01088550;XM_005381091;XM_005381093;XM_013512170;XM_013512171;XM_013512172;XM_013512173 XP_005381148;XP_005381150;XP_013367624;XP_013367625;XP_013367626;XP_013367627 MODEL 8804403 protein-coding LOC102018698 laminin subunit beta-4 NW_004955410 12319755 12419631 - 102018698 AGCD01010852;AGCD01010853;AGCD01010854;AGCD01010855;AGCD01010856;AGCD01010857;GBDK01203911;XM_013510493 XP_013365947 MODEL 153211019 protein-coding TRBV12-5 T cell receptor beta variable 12-5 39133481 snrna U2 U2 spliceosomal RNA 9013929 protein-coding Ptprn2 protein tyrosine phosphatase receptor type N2 INVOLVED IN insulin secretion involved in cellular response to glucose stimulus (ortholog); negative regulation of GTPase activity (ortholog); neurotransmitter secretion (ortholog); ASSOCIATED WITH prediabetes syndrome (ortholog); prostate cancer (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); presynapse (ortholog); receptor complex (ortholog) NW_004955579 366441 862837 - 102006083 AGCD01075546;AGCD01075547;AGCD01075548;AGCD01075549;AGCD01075550;AGCD01075551;AGCD01075552;AGCD01075553;AGCD01075554;AGCD01075555;AGCD01075556;AGCD01075557;GBDF01250942;XM_005414104 XP_005414161 MODEL 8993093 protein-coding Itga10 integrin subunit alpha 10 ENCODES a protein that exhibits collagen binding involved in cell-matrix adhesion (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); integrin-mediated signaling pathway (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH osteochondrodysplasia (ortholog); FOUND IN integrin alpha10-beta1 complex (ortholog) NW_004955568 184399 201329 + 102004020 AGCD01074505;AGCD01074506;GBCE01163151;XM_005413428;XM_013509330;XM_013509331;XM_013509332;XM_013509333 XP_005413485;XP_013364784;XP_013364785;XP_013364786;XP_013364787 MODEL 8909297 protein-coding Wipi1 WD repeat domain, phosphoinositide interacting 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); nuclear estrogen receptor binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH cholestasis (ortholog); lipid storage disease (ortholog); FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) NW_004955478 4309975 4341107 + 102028856 AGCD01055847;GBDF01159484;XM_013503209;XM_013503210;XM_013503211 XP_013358663;XP_013358664;XP_013358665 MODEL 8804924 protein-coding LOC102010212 olfactory receptor 2B6-like NW_004955576 1169060 1171950 - 102010212 AGCD01075362;XM_005413949 XP_005414006 MODEL 8925847 protein-coding Ncf2 neutrophil cytosolic factor 2 ENCODES a protein that exhibits small GTPase binding (ortholog); superoxide-generating NAD(P)H oxidase activity (ortholog); superoxide-generating NADPH oxidase activator activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); positive regulation of blood pressure (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH Acute Otitis Media; Alzheimer's disease (ortholog); autosomal recessive chronic granulomatous disease 2 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 22355717 22384746 - 102026600 AGCD01006157;GBDJ01215355;XM_005375038;XM_013521507 XP_005375095;XP_013376961 MODEL 8989607 protein-coding Ccdc117 coiled-coil domain containing 117 INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of DNA repair (ortholog); FOUND IN mitotic spindle (ortholog) NW_004955455 3019373 3034891 + 102023001 AGCD01045608;AGCD01045609;GBDF01153507;XM_005396167;XM_005396168;XM_013520380 XP_005396224;XP_005396225;XP_013375834 MODEL 39133393 snrna U4 U4 spliceosomal RNA 8773963 protein-coding LOC102010989 putative olfactory receptor 52P1 NW_004955414 21657267 21659390 + 102010989 AGCD01015425;GBDJ01377827;XM_005380103 XP_005380160 MODEL 8710288 ncrna LOC102028843 uncharacterized LOC102028843 NW_004955466 11746935 11749866 - 102028843 AGCD01051100;GBDF01160432;XR_263313 MODEL 8845281 ncrna LOC102022616 uncharacterized LOC102022616 NW_004955423 16800375 16816919 + 102022616 AGCD01023839;GBDF01251583;XR_260974 MODEL 8937409 protein-coding Tmem81 transmembrane protein 81 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN sperm-egg recognition (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 40865574 40867602 - 102004557 AGCD01006667;GBDF01254579;XM_005375341 XP_005375398 MODEL 9020114 protein-coding Sh2d1a SH2 domain containing 1A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN humoral immune response (ortholog); natural killer cell activation (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); Holoprosencephaly 13, X-linked (ortholog); FOUND IN cytoplasm (ortholog) NW_004955473 10345407 10370535 - 102017976 AGCD01054093;AGCD01054094;GBCE01037166;XM_005401276 XP_005401333 MODEL 8832867 protein-coding Aig1 androgen induced 1 ENCODES a protein that exhibits hydrolase activity (ortholog); INVOLVED IN long-chain fatty acid catabolic process (ortholog); FOUND IN membrane (ortholog) NW_004955436 17056630 17285022 - 102006161 AGCD01033941;AGCD01033942;AGCD01033943;AGCD01033944;AGCD01033945;GBDJ01186332;GBDK01191698;XM_013516660 XP_013372114 MODEL 8988210 protein-coding Percc1 proline and glutamate rich with coiled coil 1 INVOLVED IN digestive tract morphogenesis (ortholog); enteroendocrine cell differentiation (ortholog); ASSOCIATED WITH Diarrhea 11 (ortholog) NW_004955442 15800513 15803478 - 102006618 AGCD01037878;GBDK01358496;XM_005391573;XM_013517682 XP_005391630;XP_013373136 MODEL 8997112 protein-coding Fbn2 fibrillin 2 ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN bone trabecula formation (ortholog); camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); ASSOCIATED WITH aortic disease (ortholog); ARTERIAL DISSECTION (ortholog); autism spectrum disorder (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); microfibril (ortholog) NW_004955415 1307553 1535435 - 102006766 AGCD01015865;AGCD01015866;AGCD01015867;GBDF01188423;XM_005380550 XP_005380607 MODEL 39132234 snrna U6 U6 spliceosomal RNA 8936114 protein-coding Hoxc9 homeobox C9 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 1258364 1261510 + 102029711 AGCD01047172;GBCB01056308;XM_005397207 XP_005397264 MODEL 8978582 protein-coding Atg9a autophagy related 9A ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); bone morphogenesis (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955453 14203798 14214760 + 102013377 AGCD01044859;GBDJ01131454;XM_005395551;XM_013519837;XM_013519838;XM_013519839;XM_013519840;XM_013519841;XM_013519842;XM_013519843;XM_013519844;XM_013519845;XM_013519846;XM_013519847;XM_013519848 XP_005395608;XP_013375291;XP_013375292;XP_013375293;XP_013375294;XP_013375295;XP_013375296;XP_013375297;XP_013375298;XP_013375299;XP_013375300;XP_013375301;XP_013375302 MODEL 8934050 protein-coding Cd83 CD83 molecule INVOLVED IN negative regulation of interleukin-4 production (ortholog); positive regulation of CD4-positive, alpha-beta T cell differentiation (ortholog); positive regulation of interleukin-10 production (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Experimental Liver Cirrhosis (ortholog); rheumatoid arthritis (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955465 676006 692770 - 102009363 AGCD01050313;GBDK01237781;XM_005398793 XP_005398850 MODEL 8881773 protein-coding Ncf4 neutrophil cytosolic factor 4 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); superoxide-generating NADPH oxidase activator activity (ortholog); INVOLVED IN superoxide anion generation (ortholog); ASSOCIATED WITH autosomal recessive chronic granulomatous disease 3 (ortholog); chronic granulomatous disease (ortholog); Crohn's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome membrane (ortholog) NW_004955413 23388456 23405121 + 102022804 AGCD01014330;GBDJ01348708;XM_005379170;XM_013511618 XP_005379227;XP_013367072 MODEL 9005190 protein-coding Twnk twinkle mtDNA helicase ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); DNA replication (ortholog); DNA-templated DNA replication (ortholog); ASSOCIATED WITH Auditory Neuropathy (ortholog); autosomal dominant progressive external ophthalmoplegia 1 (ortholog); autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 3 (ortholog); FOUND IN mitochondrial chromosome (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955485 9193838 9198697 - 102030199 AGCD01058752;GBBH01101422;XM_005403885;XM_005403886 XP_005403942;XP_005403943 MODEL 10222008 ncrna LOC106147179 uncharacterized LOC106147179 NW_004955524 3766903 3775886 + 106147179 AGCD01068926;AGCD01068927;GBCE01161144;XR_001231954 MODEL 8972200 protein-coding Chrm2 cholinergic receptor muscarinic 2 ENCODES a protein that exhibits arrestin family protein binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; ASSOCIATED WITH asthma (ortholog); bipolar disorder (ortholog); Bradycardia (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); cholinergic synapse (ortholog) NW_004955494 5845581 5975614 - 102007442 AGCD01061526;AGCD01061527;GBDF01014366;XM_005405469 XP_005405526 MODEL 8852868 protein-coding Tspo translocator protein ENCODES a protein that exhibits androgen binding (ortholog); benzodiazepine receptor activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN adrenal gland development (ortholog); behavioral response to pain (ortholog); C21-steroid hormone biosynthetic process (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH cholesterol ester storage disease (ortholog); COVID-19 (ortholog); End Stage Liver Disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955413 28309105 28315075 + 102016254 AGCD01014556;GBDK01018713;XM_005379436;XM_005379437;XM_005379438 XP_005379493;XP_005379494;XP_005379495 MODEL 8985971 protein-coding LOC102028845 formin-like protein 6 NW_004955467 74598 87270 - 102028845 AGCD01051208;GBDF01221170;XM_013522044;XM_013522045 XP_013377498;XP_013377499 MODEL 8747701 protein-coding Arhgap15 Rho GTPase activating protein 15 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cell shape (ortholog); FOUND IN plasma membrane (ortholog) NW_004955440 9591173 10182086 + 102016522 AGCD01036384;AGCD01036385;AGCD01036386;GBCE01021095;XM_005390780;XM_005390781;XM_013517486;XM_013517487 XP_005390837;XP_005390838;XP_013372940;XP_013372941 MODEL 8712920 protein-coding Awat2 acyl-CoA wax alcohol acyltransferase 2 ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); retinol O-fatty-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); wax biosynthetic process (ortholog); ASSOCIATED WITH dry eye syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955475 9594157 9634596 - 102019267 AGCD01055068;GBCC01013125;XM_005401606;XM_005401607;XM_005401608 XP_005401663;XP_005401664;XP_005401665 MODEL 8868414 protein-coding Tle2 TLE family member 2, transcriptional corepressor ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH lymphopenia (ortholog); neutropenia (ortholog); FOUND IN nuclear body (ortholog) NW_004955495 5347496 5366743 + 102026761 AGCD01062002;GBBH01012059;GBDI01296754;XM_013505226 XP_013360680 MODEL 8952934 protein-coding Cd84 CD84 molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of granulocyte macrophage colony-stimulating factor production (ortholog); negative regulation of interleukin-10 production (ortholog); negative regulation of interleukin-18 production (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 12280467 12313976 - 102019259 AGCD01052149;GBDI01339680;XM_005400211 XP_005400268 MODEL 9037274 protein-coding Hif3a hypoxia inducible factor 3 subunit alpha ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Chronic Intermittent Hypoxia (ortholog); pulmonary hypertension (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955574 490702 520867 + 102025633 AGCD01075109;AGCD01075110;GBBH01161711;XM_005413830;XM_005413831;XM_005413832;XM_013509557;XR_265060 XP_005413887;XP_005413888;XP_005413889;XP_013365011 MODEL 8774922 protein-coding LOC102004723 maltase-glucoamylase, intestinal NW_004955494 1407172 1645558 - 102004723 AGCD01061397;AGCD01061398;AGCD01061399;AGCD01061400;AGCD01061401;AGCD01061402;AGCD01061403;AGCD01061404;AGCD01061405;AGCD01061406;AGCD01061407;AGCD01061408;AGCD01061409;AGCD01061410;AGCD01061411;AGCD01061412;AGCD01061413;AGCD01061414;AGCD01061415;AGCD01061416;AGCD01061417;AGCD01061418;AGCD01061419;GBCQ01114150;GBDK01228223;XM_013505005 XP_013360459 MODEL 8723280 protein-coding LOC102007210 NKG2-D type II integral membrane protein NW_004955413 7623358 7639703 - 102007210 AGCD01013827;GBDI01345487;XM_005378934 XP_005378991 MODEL 9024593 protein-coding Gpr162 G protein-coupled receptor 162 ASSOCIATED WITH diabetes mellitus (ortholog) NW_004955413 4425609 4428901 + 102029607 AGCD01013614;GBBH01052036;GBCE01002891;XM_013511324 XP_013366778 MODEL 8974597 protein-coding Ntn1 netrin 1 INVOLVED IN anterior/posterior axon guidance (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain edema (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN basement membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 7795175 7991597 - 102006327 AGCD01051438;AGCD01051439;AGCD01051440;AGCD01051441;AGCD01051442;GBBH01065257;GBCE01000350;XM_005399748 XP_005399805 MODEL 39131441 protein-coding TRDC T cell receptor delta constant 8852628 ncrna LOC102010215 uncharacterized LOC102010215 NW_004955449 8016115 8072779 - 102010215 AGCD01042007;AGCD01042008;XR_262494 MODEL 10354891 ncrna LOC106150149 uncharacterized LOC106150149 NW_004955466 11737194 11739646 - 106150149 AGCD01051100;GBDF01160437;XR_001236779 MODEL 8715298 protein-coding Ptpro protein tyrosine phosphatase receptor type O ENCODES a protein that exhibits cadherin binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cell morphogenesis (ortholog); glomerulus development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); dendritic spine (ortholog); GABA-ergic synapse (ortholog) NW_004955413 12019026 12248026 + 102005022 AGCD01013977;AGCD01013978;AGCD01013979;AGCD01013980;AGCD01013981;AGCD01013982;AGCD01013983;AGCD01013984;AGCD01013985;GBDJ01377144;XM_005379017;XM_013511680;XM_013511681 XP_005379074;XP_013367134;XP_013367135 MODEL 8797783 ncrna LOC102017508 uncharacterized LOC102017508 NW_004955441 14129465 14132048 + 102017508 AGCD01037177;GBCQ01032923;XR_001235349;XR_262079 MODEL 39133395 snrna U4 U4 spliceosomal RNA 8763464 protein-coding Ampd2 adenosine monophosphate deaminase 2 ENCODES a protein that exhibits AMP deaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN AMP metabolic process (ortholog); ATP metabolic process (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog) NW_004955435 13029377 13040972 + 102007268 AGCD01033177;GBBH01116793;XM_005388885;XM_013516433;XM_013516434;XM_013516435 XP_005388942;XP_013371887;XP_013371888;XP_013371889 MODEL 8863930 protein-coding Fndc1 fibronectin type III domain containing 1 INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) NW_004955439 3251851 3356679 - 102009106 AGCD01035671;AGCD01035672;AGCD01035673;GBDI01054738;GBDJ01019727;XM_005390511;XM_013517412 XP_005390568;XP_013372866 MODEL 8922629 protein-coding Ccdc12 coiled-coil domain containing 12 PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog) NW_004955420 25212888 25257733 + 102019176 AGCD01021347;GBCE01002638;XM_013513389 XP_013368843 MODEL 8796380 protein-coding Klhdc7a kelch domain containing 7A ASSOCIATED WITH Breast Neoplasms (ortholog) NW_004955527 689631 696250 - 102019840 AGCD01069385;GBCQ01005985;XM_005409805 XP_005409862 MODEL 8731399 protein-coding Plppr1 phospholipid phosphatase related 1 ENCODES a protein that exhibits lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN nervous system development (ortholog); phospholipid dephosphorylation (ortholog); ASSOCIATED WITH visual epilepsy (ortholog); FOUND IN neuron projection (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955419 24544868 24809419 - 102010266 AGCD01020350;AGCD01020351;AGCD01020352;AGCD01020353;AGCD01020354;AGCD01020355;AGCD01020356;GBCE01026760;XM_005382804;XM_005382805;XM_013513312 XP_005382861;XP_005382862;XP_013368766 MODEL 8861657 protein-coding Dock11 dedicator of cytokinesis 11 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); marginal zone B cell differentiation (ortholog); positive regulation of filopodium assembly (ortholog); ASSOCIATED WITH AUTOINFLAMMATORY DISEASE, MULTISYSTEM, WITH IMMUNE DYSREGULATION, X-LINKED (ortholog) NW_004955534 1239241 1431714 - 102017159 AGCD01070490;AGCD01070491;AGCD01070492;AGCD01070493;AGCD01070494;AGCD01070495;AGCD01070496;GBDI01227749;XM_005410459;XM_005410460 XP_005410516;XP_005410517 MODEL 39133657 mirna MIR582 microRNA 582 8962494 protein-coding Eef1akmt2 EEF1A lysine methyltransferase 2 ENCODES a protein that exhibits methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine methylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955477 2739310 2779184 - 102005371 AGCD01055526;AGCD01055527;AGCD01055528;AGCD01055529;AGCD01055530;AGCD01055531;AGCD01055532;GBBH01222270;XM_005401982 XP_005402039 MODEL 8755646 protein-coding Chrm3 cholinergic receptor muscarinic 3 ENCODES a protein that exhibits acetylcholine binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); G protein-coupled acetylcholine receptor binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; ASSOCIATED WITH Ascites (ortholog); asthma (ortholog); bladder disease (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); basal plasma membrane (ortholog) NW_004955492 958347 1429832 - 102015019 AGCD01060652;AGCD01060653;AGCD01060654;AGCD01060655;AGCD01060656;AGCD01060657;AGCD01060658;AGCD01060659;GBDK01098808;XM_005404924;XM_013504730;XM_013504731;XM_013504732;XM_013504733;XM_013504734;XR_001231254 XP_005404981;XP_013360184;XP_013360185;XP_013360186;XP_013360187;XP_013360188 MODEL 9033362 protein-coding Rhbdl2 rhomboid like 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 16506830 16553594 - 102020301 AGCD01044514;GBDF01188796;XM_005395233;XM_005395235 XP_005395290;XP_005395292 MODEL 8943590 protein-coding Pias2 protein inhibitor of activated STAT 2 ENCODES a protein that exhibits DNA binding (ortholog); nuclear androgen receptor binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); DNA-templated transcription (ortholog); endoplasmic reticulum unfolded protein response (ortholog); PARTICIPATES IN androgen signaling pathway; Jak-Stat signaling pathway; FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955402 32263616 32358532 - 102004439 AGCD01000814;AGCD01000815;AGCD01000816;AGCD01000817;GBDI01219645;XM_005372880;XM_013510479;XM_013510482;XM_013510483;XM_013510485;XM_013510488;XM_013510490 XP_005372937;XP_013365933;XP_013365936;XP_013365937;XP_013365939;XP_013365942;XP_013365944 MODEL 8874529 protein-coding Adgrf1 adhesion G protein-coupled receptor F1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cAMP (ortholog); memory (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 11744387 11772260 - 102011043 AGCD01034581;AGCD01034582;GBCQ01041145;XM_005389875;XM_013517104;XM_013517105;XM_013517106;XM_013517107 XP_005389932;XP_013372558;XP_013372559;XP_013372560;XP_013372561 MODEL 8704761 protein-coding LOC102024327 cytokine receptor common subunit beta-like NW_004955413 23468980 23472461 - 102024327 AGCD01014332;GBDI01259559;XM_005379176;XR_260099 XP_005379233 MODEL 39131582 mirna MIR590 microRNA 590 8902623 protein-coding Itga11 integrin subunit alpha 11 ENCODES a protein that exhibits collagen binding (ortholog); collagen binding involved in cell-matrix adhesion (ortholog); collagen receptor activity (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); collagen-activated signaling pathway (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH genetic disease (ortholog); pancreatic cancer (ortholog); FOUND IN focal adhesion (ortholog); integrin alpha11-beta1 complex (ortholog) NW_004955450 7730936 7823342 + 102021069 AGCD01042546;AGCD01042547;AGCD01042548;AGCD01042549;GBCE01032878;XM_005393676;XM_013518950 XP_005393733;XP_013374404 MODEL 8730635 protein-coding Hoxd1 homeobox D1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic skeletal system development (ortholog); neuron differentiation (ortholog); sensory perception of pain (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Hyperalgesia (ortholog); Ovarian Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 20476813 20478604 - 102004881 AGCD01002158;GBDJ01374107;XM_005373884 XP_005373941 MODEL 8958804 protein-coding LOC102022617 olfactory receptor 7E24-like NW_004955495 644019 644993 - 102022617 AGCD01061645;XM_005406123 XP_005406180 MODEL 8888047 ncrna LOC102010990 uncharacterized LOC102010990 NW_004955471 9880793 9917131 + 102010990 AGCD01053222;GBDF01194926;XR_263532 MODEL 9019856 protein-coding Tmem82 transmembrane protein 82 NW_004955527 2428818 2432843 - 102009538 AGCD01069436;GBDI01182004;XM_005409860;XM_013507418 XP_005409917;XP_013362872 MODEL 8865675 protein-coding Bcl2l14 BCL2 like 14 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH prostate carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955413 9040272 9069266 + 102012624 AGCD01013891;AGCD01013892;GBDF01045938;XM_005378949;XM_005378950;XM_005378951;XM_005378952;XM_005378953;XM_005378954;XM_005378955;XM_005378956;XM_013511475;XM_013511476;XM_013511478 XP_005379006;XP_005379007;XP_005379008;XP_005379009;XP_005379010;XP_005379011;XP_005379012;XP_005379013;XP_013366929;XP_013366930;XP_013366932 MODEL 10384357 pseudo LOC102010218 Ig heavy chain V-III region 23-like NW_004957635 267 750 + 102010218 AGCD01081031 MODEL 8824140 protein-coding Sh2d1b SH2 domain containing 1B INVOLVED IN negative regulation of natural killer cell mediated cytotoxicity (ortholog); peptidyl-tyrosine phosphorylation (ortholog); positive regulation of natural killer cell mediated cytotoxicity (ortholog) NW_004955462 13909266 13934239 + 102013590 AGCD01049435;GBDK01188618;XM_005398275;XR_001236587 XP_005398332 MODEL 8876902 protein-coding Gins2 GINS complex subunit 2 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN nucleus (ortholog) NW_004955541 809079 816807 - 102019106 AGCD01071360;AGCD01071361;GBDF01052450;XM_005410979 XP_005411036 MODEL 8908004 protein-coding Plxnc1 plexin C1 INVOLVED IN regulation of synapse pruning (ortholog); ASSOCIATED WITH endometriosis (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog) NW_004955405 30885277 31023947 + 102027377 AGCD01005280;GBDF01119435;XM_005374690;XM_013518393;XM_013518395;XM_013518396;XM_013518398 XP_005374747;XP_013373847;XP_013373849;XP_013373850;XP_013373852 MODEL 8880568 protein-coding Aimp1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 ENCODES a protein that exhibits cytokine activity (ortholog); GTPase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cell-cell signaling (ortholog); defense response to virus (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 3 (ortholog); Muscle Hypotonia (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cell surface (ortholog); cytosol (ortholog) NW_004955496 3073480 3108012 - 102008238 AGCD01062280;AGCD01062281;GBBH01115746;XM_005406219;XM_005406220 XP_005406276;XP_005406277 MODEL 39132236 snrna U6 U6 spliceosomal RNA 8849141 protein-coding Nck1 NCK adaptor protein 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); eukaryotic initiation factor eIF2 binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN actin filament organization (ortholog); antiviral innate immune response (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); nephrotic syndrome (ortholog); proteinuria (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955501 1867956 1963091 - 102016727 AGCD01064064;AGCD01064065;GBDF01125073;XM_005406775;XM_005406776;XM_005406777;XM_013505795;XM_013505796 XP_005406832;XP_005406833;XP_005406834;XP_013361249;XP_013361250 MODEL 8945170 protein-coding Synj2 synaptojanin 2 ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol monophosphate phosphatase activity (ortholog); INVOLVED IN clathrin coat assembly (ortholog); inositol phosphate catabolic process (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Meniere's disease (ortholog); FOUND IN axon terminus (ortholog); cytoplasmic microtubule (ortholog); presynapse (ortholog) NW_004955439 4305630 4400775 - 102015243 AGCD01035708;GBCE01021710;GBCQ01037324;XM_005390531;XM_005390532;XM_013517389;XM_013517390;XM_013517391;XM_013517392;XM_013517393 XP_005390588;XP_005390589;XP_013372843;XP_013372844;XP_013372845;XP_013372846;XP_013372847 MODEL 39133482 snrna U2 U2 spliceosomal RNA 8822316 protein-coding LOC102028847 olfactory receptor 6N2 NW_004955468 10647981 10648934 - 102028847 AGCD01052093;XM_005400318 XP_005400375 MODEL 8819354 protein-coding Tspo2 translocator protein 2 ENCODES a protein that exhibits 5-aminolevulinic acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); INVOLVED IN 5-aminolevulinic acid import across plasma membrane (ortholog); enucleate erythrocyte differentiation (ortholog); import across plasma membrane (ortholog); FOUND IN endoplasmic reticulum (ortholog); organelle membrane (ortholog); plasma membrane (ortholog) NW_004955437 7714107 7715796 + 102005506 AGCD01034465;GBBH01126606;XM_005389665;XM_005389666 XP_005389722;XP_005389723 MODEL 8941618 protein-coding Bpi bactericidal permeability increasing protein ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); immune response (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955445 18393854 18433948 - 102012913 AGCD01039904;GBCQ01100945;XM_005392537;XM_013518374;XM_013518375;XM_013518376 XP_005392594;XP_013373828;XP_013373829;XP_013373830 MODEL 8748680 protein-coding Axdnd1 axonemal dynein light chain domain containing 1 INVOLVED IN axoneme assembly (ortholog); establishment of Sertoli cell barrier (ortholog); leukocyte migration (ortholog); ASSOCIATED WITH male infertility (ortholog); nephrotic syndrome type 1 (ortholog); spermatogenic failure 3 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955406 18717383 18859263 + 102003088 AGCD01006057;AGCD01006058;AGCD01006059;AGCD01006060;AGCD01006061;AGCD01006062;AGCD01006063;AGCD01006064;AGCD01006065;AGCD01006066;AGCD01006067;AGCD01006068;GBDF01083157;XM_005374953;XM_005374954;XM_005374955;XM_005374956;XM_005374957;XM_005374958;XM_013521187;XM_013521195 XP_005375010;XP_005375011;XP_005375012;XP_005375013;XP_005375014;XP_005375015;XP_013376641;XP_013376649 MODEL 8956289 protein-coding Exoc1 exocyst complex component 1 INVOLVED IN embryo implantation (ortholog); PARTICIPATES IN insulin signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955447 15049087 15100628 - 102029915 AGCD01041032;GBDJ01190754;XM_005392876;XM_005392877;XM_005392879;XM_005392880;XM_005392881;XM_013518548;XM_013518549;XM_013518550 XP_005392933;XP_005392934;XP_005392936;XP_005392937;XP_005392938;XP_013374002;XP_013374003;XP_013374004 MODEL 8912497 ncrna LOC102004725 uncharacterized LOC102004725 NW_004955423 3357252 3371703 + 102004725 AGCD01023511;GBDK01121190;XR_001234108;XR_260946 MODEL 8905832 protein-coding Tle3 TLE family member 3, transcriptional corepressor ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Breast Neoplasms (ortholog); rheumatoid arthritis (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); chromatin (ortholog); nucleoplasm (ortholog) NW_004955450 6604915 6645305 + 102011928 AGCD01042523;GBDJ01015569;XM_005393646;XM_005393647;XM_005393648;XM_005393649;XM_005393650;XM_005393651;XM_005393652;XM_005393654;XM_005393655;XM_005393656;XM_005393657;XM_013518996;XM_013518998 XP_005393703;XP_005393704;XP_005393705;XP_005393706;XP_005393707;XP_005393708;XP_005393709;XP_005393711;XP_005393712;XP_005393713;XP_005393714;XP_013374450;XP_013374452 MODEL 8925093 ncrna LOC102020113 uncharacterized LOC102020113 NW_004955416 21270399 21281753 + 102020113 AGCD01017501;AGCD01017502;GBCB01080657;XR_001233350;XR_260407 MODEL 8801909 protein-coding Pou2f2 POU class 2 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); mature B cell differentiation (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955555 759308 793500 + 102030245 AGCD01073048;AGCD01073049;GBDI01187600;XM_005412389;XM_005412390;XM_005412391;XM_005412392;XM_005412393;XM_013508765;XM_013508766;XM_013508768;XM_013508769;XM_013508770;XM_013508771;XM_013508772;XM_013508774;XM_013508775;XM_013508776 XP_005412446;XP_005412447;XP_005412448;XP_005412449;XP_005412450;XP_013364219;XP_013364220;XP_013364222;XP_013364223;XP_013364224;XP_013364225;XP_013364226;XP_013364228;XP_013364229;XP_013364230 MODEL 8730608 protein-coding LOC102004360 RB-associated KRAB zinc finger protein NW_004955460 10721784 10738710 - 102004360 AGCD01048602;GBDF01153023;XM_005397845;XM_005397846;XM_013521129;XM_013521131;XM_013521132 XP_005397902;XP_005397903;XP_013376583;XP_013376585;XP_013376586 MODEL 8730679 protein-coding Ampd3 adenosine monophosphate deaminase 3 ENCODES a protein that exhibits AMP deaminase activity (ortholog); INVOLVED IN ADP catabolic process (ortholog); ADP metabolic process (ortholog); AMP catabolic process (ortholog); ASSOCIATED WITH Adenosine Monophosphate Deaminase Deficiency (ortholog); Erythrocyte Amp Deaminase Deficiency (ortholog); myoepithelioma (ortholog) NW_004955414 26073192 26116448 + 102006122 AGCD01015637;AGCD01015638;GBDI01356542;XM_005380277;XM_005380278 XP_005380334;XP_005380335 MODEL 10308184 protein-coding Fbn3 fibrillin 3 ASSOCIATED WITH basal cell carcinoma (ortholog); Contracture (ortholog) NW_004955563 1178833 1248095 + 106147456 AGCD01074128;AGCD01074129;AGCD01074130;AGCD01074131;AGCD01074132;AGCD01074133;AGCD01074134;AGCD01074135;AGCD01074136;AGCD01074137;GBDF01291500;XM_013509128 XP_013364582 MODEL 8959305 protein-coding Perm1 PPARGC1 and ESRR induced regulator, muscle 1 INVOLVED IN regulation of DNA-templated transcription (ortholog); response to muscle activity (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955486 9731317 9736821 + 102011669 AGCD01059198;GBDF01221642;XM_005404289;XM_013504203;XM_013504204 XP_005404346;XP_013359657;XP_013359658 MODEL 9002653 protein-coding Twsg1 twisted gastrulation BMP signaling modulator 1 ENCODES a protein that exhibits heparin binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); camera-type eye development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH holoprosencephaly (ortholog); Jaw Abnormalities (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); extracellular space (ortholog) NW_004955402 2652020 2685350 - 102024864 AGCD01000086;GBCE01001631;GBDK01185816;XM_013515722 XP_013371176 MODEL 8720600 pseudo LOC102018700 receptor-type tyrosine-protein phosphatase alpha pseudogene NW_004955411 21173967 21176388 - 102018700 AGCD01012069 MODEL 9038488 protein-coding Bcl2l15 BCL2 like 15 FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955435 17151721 17158808 - 102015237 AGCD01033347;GBDJ01257385;XM_005388987 XP_005389044 MODEL 8858267 protein-coding Wipi2 WD repeat domain, phosphoinositide interacting 2 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH SHORT STATURE AND VARIABLE SKELETAL ANOMALIES (ortholog); FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytosol (ortholog) NW_004955460 10090343 10132724 + 102026612 AGCD01048572;AGCD01048573;GBDF01050079;XM_005397828;XM_005397829;XM_005397830;XM_005397831;XM_005397833;XM_013521133;XM_013521134 XP_005397885;XP_005397886;XP_005397887;XP_005397888;XP_005397890;XP_013376587;XP_013376588 MODEL 8709558 protein-coding Cd86 CD86 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN B cell activation (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) NW_004955427 21375820 21436767 + 102024258 AGCD01027444;AGCD01027445;GBDK01357791;XM_013515233;XM_013515234;XM_013515236;XM_013515237 XP_013370687;XP_013370688;XP_013370690;XP_013370691 MODEL 8715762 protein-coding Higd1a HIG1 hypoxia inducible domain family member 1A INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); negative regulation of apoptotic process (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955420 28040320 28050723 + 102024120 AGCD01021468;AGCD01021469;GBDF01086654;XM_005383528;XM_005383529;XM_005383530;XM_013513604 XP_005383585;XP_005383586;XP_005383587;XP_013369058 MODEL 8837302 protein-coding Atg9b autophagy related 9B INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog) NW_004955491 5458152 5467260 - 102029869 AGCD01060483;AGCD01060484;GBBH01038067;GBDJ01029728;XM_013504581 XP_013360035 MODEL 8864466 protein-coding Gpr17 G protein-coupled receptor 17 ENCODES a protein that exhibits receptor serine/threonine kinase binding (ortholog); INVOLVED IN negative regulation of inflammatory response to antigenic stimulus (ortholog); oligodendrocyte differentiation (ortholog); ASSOCIATED WITH brain infarction (ortholog); Hypercholesterolemia (ortholog); Insulin Resistance (ortholog) NW_004955459 2890266 2903053 - 102027152 AGCD01048004;GBCQ01043373;XM_005397595;XM_005397596;XM_013521049 XP_005397652;XP_005397653;XP_013376503 MODEL 8715778 ncrna LOC102024328 uncharacterized LOC102024328 NW_004955471 6006346 6008801 - 102024328 AGCD01053116;GBDF01188582;XR_001237053 MODEL 9040273 protein-coding Ntn3 netrin 3 ENCODES a protein that exhibits signaling receptor binding (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955442 14838076 14840857 - 102010740 AGCD01037842;GBCE01183221;XM_013517935 XP_013373389 MODEL 39133396 snrna U4 U4 spliceosomal RNA 8898370 protein-coding Fndc10 fibronectin type III domain containing 10 NW_004955486 9301802 9303246 + 102018501 AGCD01059176;GBBH01012092;GBDF01015261;XM_013504159 XP_013359613 MODEL 8801590 protein-coding Rhbdl3 rhomboid like 3 NW_004955481 7233305 7276085 + 102024907 AGCD01057058;GBBH01210574;GBCE01043483;XM_005402817 XP_005402874 MODEL 9011729 protein-coding Hoxd10 homeobox D10 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); congenital vertical talus (ortholog); Disease Progression (ortholog) NW_004955403 20543224 20548801 - 102011609 AGCD01002163;GBCQ01005047;XM_005373415 XP_005373472 MODEL 10082692 ncrna LOC106147180 uncharacterized LOC106147180 NW_004955524 3763940 3765788 + 106147180 AGCD01068926;GBCE01091913;XR_001231955 MODEL 9046497 protein-coding Ccdc120 coiled-coil domain containing 120 INVOLVED IN intracellular protein localization (ortholog); microtubule anchoring at centrosome (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog) NW_004955543 577078 594076 + 102005510 AGCD01071593;GBDF01094455;XM_005411315;XM_013508175;XM_013508176;XM_013508177;XM_013508178;XM_013508179;XM_013508180;XM_013508181 XP_005411372;XP_013363629;XP_013363630;XP_013363631;XP_013363632;XP_013363633;XP_013363634;XP_013363635 MODEL 8867854 protein-coding Klhdc7b kelch domain containing 7B NW_004955413 33534794 33536614 + 102006563 AGCD01014677;XM_005379588 XP_005379645 MODEL 8758141 pseudo LOC102010222 small nuclear ribonucleoprotein Sm D1 pseudogene NW_004955405 4117051 4117475 - 102010222 AGCD01004644;XM_005374670 MODEL 8818216 protein-coding Plppr2 phospholipid phosphatase related 2 NW_004955495 2270323 2279688 + 102021683 AGCD01061760;GBBH01044136;XM_005405660;XM_005405661 XP_005405717;XP_005405718 MODEL 8938852 protein-coding Eef1akmt3 EEF1A lysine methyltransferase 3 ENCODES a protein that exhibits heat shock protein binding (ortholog); methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine methylation (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955458 5482524 5488040 + 102012741 AGCD01047494;GBDI01385591;XM_005397419 XP_005397476 MODEL 8840693 protein-coding Sh2d2a SH2 domain containing 2A INVOLVED IN cell population proliferation (ortholog); PARTICIPATES IN Erk5 MAPK signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); multiple sclerosis (ortholog); systemic juvenile rheumatoid arthritis (ortholog) NW_004955545 2881954 2891021 - 102010633 AGCD01071927;GBBH01050829;XM_005411705;XM_005411707;XM_005411708;XM_005411709;XM_005411712;XM_013508210 XP_005411762;XP_005411764;XP_005411765;XP_005411766;XP_005411769;XP_013363664 MODEL 8842986 protein-coding LOC102007211 60S ribosomal protein L9-like NW_004955468 1922431 1924783 + 102007211 AGCD01051787;GBDF01014892;XM_005399914 XP_005399971 MODEL 8969866 pseudo LOC102028851 cyclin-dependent kinase 1 pseudogene NW_004955414 7272154 7278058 - 102028851 AGCD01014953 MODEL 9032234 protein-coding Chrm4 cholinergic receptor muscarinic 4 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH Catatonia (ortholog); congestive heart failure (ortholog); Tremor (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); glutamatergic synapse (ortholog) NW_004955422 1647663 1655363 + 102008737 AGCD01022467;GBDF01011379;XM_005384028;XM_005384029;XM_005384030;XR_001233927 XP_005384085;XP_005384086;XP_005384087 MODEL 9021666 protein-coding Trdmt1 tRNA aspartic acid methyltransferase 1 ENCODES a protein that exhibits tRNA (cytidine-5-)-methyltransferase activity (ortholog); tRNA methyltransferase activity (ortholog); INVOLVED IN response to amphetamine (ortholog); tRNA methylation (ortholog); tRNA modification (ortholog); FOUND IN cytoplasm (ortholog) NW_004955429 10741512 10774268 + 102028115 AGCD01028679;GBCE01009529;XM_005386963;XM_005386964 XP_005387020;XP_005387021 MODEL 8878486 protein-coding Pias3 protein inhibitor of activated STAT 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); NF-kappaB binding (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); negative regulation of osteoclast differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; Jak-Stat signaling pathway; sumoylation pathway; ASSOCIATED WITH Uterine Cervical Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955568 227603 237396 + 102006402 AGCD01074506;GBDF01090380;XM_005413436;XM_005413437 XP_005413493;XP_005413494 MODEL 8820626 protein-coding Ptprq protein tyrosine phosphatase receptor type Q INVOLVED IN detection of mechanical stimulus involved in sensory perception of sound (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 73 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 84A (ortholog); FOUND IN apical plasma membrane (ortholog); stereocilium base (ortholog); stereocilium bundle (ortholog) NW_004955405 19123905 19318619 + 102021834 AGCD01005031;AGCD01005032;AGCD01005033;AGCD01005034;AGCD01005035;GBCE01116834;XM_005374365;XM_013517925 XP_005374422;XP_013373379 MODEL 8858992 protein-coding Tspoap1 TSPO associated protein 1 ENCODES a protein that exhibits benzodiazepine receptor binding (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); INVOLVED IN regulation of neurotransmitter secretion (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); COVID-19 (ortholog); dystonia (ortholog); FOUND IN calyx of Held (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955451 4707440 4733179 + 102027599 AGCD01043140;GBDK01066816;XM_013519267;XM_013519268;XM_013519269;XM_013519270;XM_013519271;XM_013519272 XP_013374721;XP_013374722;XP_013374723;XP_013374724;XP_013374725;XP_013374726 MODEL 9025951 protein-coding Higd1b HIG1 hypoxia inducible domain family member 1B ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 17653200 17655452 + 102018457 AGCD01043765;GBDK01273954;XM_005394543 XP_005394600 MODEL 8941572 protein-coding LOC102010999 uncharacterized LOC102010999 NW_004955415 28977064 28978164 + 102010999 AGCD01016646;XM_005381137 XP_005381194 MODEL 8717000 protein-coding Tmem86a transmembrane protein 86A ENCODES a protein that exhibits alkenylglycerophosphocholine hydrolase activity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955414 33357432 33361478 + 102024787 AGCD01015805;GBCE01065788;XM_005380425 XP_005380482 MODEL 8992158 protein-coding Arhgap17 Rho GTPase activating protein 17 INVOLVED IN actin filament organization (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955493 3326893 3384621 - 102028549 AGCD01060988;AGCD01060989;AGCD01060990;AGCD01060991;GBBH01117744;GBDJ01132148;XM_013504866;XM_013504867;XM_013504868;XM_013504869;XM_013504870 XP_013360320;XP_013360321;XP_013360322;XP_013360323;XP_013360324 MODEL 8923839 pseudo LOC102004361 rRNA-processing protein FCF1 homolog NW_004955409 37449725 37450930 + 102004361 AGCD01010519 MODEL 39132240 snrna U6 U6 spliceosomal RNA 8821885 protein-coding Gins3 GINS complex subunit 3 INVOLVED IN cellular senescence (ortholog); DNA replication (ortholog); multicellular organism growth (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 15843025 15864942 + 102012353 AGCD01031770;AGCD01031771;AGCD01031772;GBDJ01376801;XM_005388439 XP_005388496 MODEL 8920004 protein-coding Aimp2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of neuron apoptotic process (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 17 (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955460 13754487 13762726 - 102023783 AGCD01048722;GBDJ01191946;XM_005397896;XM_005397897 XP_005397953;XP_005397954 MODEL 8888104 protein-coding Plxnd1 plexin D1 ENCODES a protein that exhibits protein domain specific binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); aorta development (ortholog); branching involved in blood vessel morphogenesis (ortholog); ASSOCIATED WITH Congenital Heart Defects, Multiple Types, 9 (ortholog); diastolic heart failure (ortholog); DiGeorge syndrome (ortholog); FOUND IN axon (ortholog); cell body (ortholog); glutamatergic synapse (ortholog) NW_004955429 17746814 17775072 + 102012112 AGCD01028866;GBBH01026681;GBDF01280799;XM_013515508 XP_013370962 MODEL 8992637 pseudo LOC102018702 U2 small nuclear ribonucleoprotein B'' pseudogene NW_004955465 10212506 10213202 - 102018702 AGCD01050503 MODEL 8718196 protein-coding Nck2 NCK adaptor protein 2 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); protein-containing complex binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell migration (ortholog); dendritic spine development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Alzheimer's disease (ortholog); nephrotic syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); postsynaptic density (ortholog) NW_004955470 10487962 10593046 + 102030183 AGCD01052871;AGCD01052872;GBDF01223303;XM_005400789 XP_005400846 MODEL 8853961 protein-coding Txk TXK tyrosine kinase INVOLVED IN adaptive immune response (ortholog); NK T cell differentiation (ortholog); positive regulation of cytokine production (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955443 474099 556697 + 102024387 AGCD01038111;AGCD01038112;AGCD01038113;AGCD01038114;AGCD01038115;AGCD01038116;GBDJ01052835;XM_005391880;XM_005391882;XM_005391883;XM_005391884;XR_262172;XR_262173 XP_005391937;XP_005391939;XP_005391940;XP_005391941 MODEL 8978832 protein-coding Synj2bp synaptojanin 2 binding protein ENCODES a protein that exhibits type II activin receptor binding (ortholog); INVOLVED IN intracellular distribution of mitochondria (ortholog); negative regulation of activin receptor signaling pathway (ortholog); negative regulation of angiogenesis (ortholog); FOUND IN cell surface (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955466 80766 127383 + 102022798 AGCD01050649;AGCD01050650;GBDF01187942;XM_005399019 XP_005399076 MODEL 39131562 protein-coding BPIFA1 BPI fold containing family A member 1 39133704 mirna MIR592 microRNA 592 9031300 pseudo LOC102017510 prefoldin subunit 4 pseudogene NW_004955442 13301394 13301783 - 102017510 AGCD01037769 MODEL 8862821 protein-coding Axin1 axin 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN axial mesoderm development (ortholog); axial mesoderm formation (ortholog); beta-catenin destruction complex assembly (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; N-cadherin signaling pathway; ASSOCIATED WITH Caudal Duplication Anomaly (ortholog); colon cancer (ortholog); CRANIOMETADIAPHYSEAL OSTEOSCLEROSIS WITH HIP DYSPLASIA (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cell cortex (ortholog); cell periphery (ortholog) NW_004955442 16845728 16898301 + 102030483 AGCD01037918;AGCD01037919;AGCD01037920;AGCD01037921;GBDK01223506;XM_005391658;XM_013517744 XP_005391715;XP_013373198 MODEL 10164178 ncrna LOC106150150 uncharacterized LOC106150150 NW_004955466 2661650 2664696 - 106150150 AGCD01050752;GBCE01030905;XR_001236782 MODEL 9031037 protein-coding Scrn3 secernin 3 INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog) NW_004955449 935061 960514 - 102007384 AGCD01041776;AGCD01041777;AGCD01041778;GBDJ01173998;XM_005393190;XM_013518736 XP_005393247;XP_013374190 MODEL 9043657 protein-coding LOC102004729 histone-lysine N-methyltransferase PRDM9 NW_004955499 553632 566756 + 102004729 AGCD01063239;AGCD01063240;GBCQ01046889;GBDF01224963;XM_013505574 XP_013361028 MODEL 9061525 protein-coding Adgrf2 adhesion G protein-coupled receptor F2 INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); gene expression (ortholog); ASSOCIATED WITH autistic disorder (ortholog) NW_004955437 12104938 12126649 + 102012684 AGCD01034597;AGCD01034598;GBCC01011063;XM_005389877 XP_005389934 MODEL 9056708 protein-coding LOC102020117 uncharacterized LOC102020117 NW_004955417 27294545 27298443 + 102020117 AGCD01018545;GBDF01044231;XM_005381993 XP_005382050 MODEL 8782912 protein-coding Tle4 TLE family member 4, transcriptional corepressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955530 3795336 3932596 - 102014942 AGCD01069963;AGCD01069964;GBCC01033359;GBDF01281043;XM_013507550 XP_013363004 MODEL 8765343 protein-coding Itga2 integrin subunit alpha 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); collagen binding (ortholog); collagen binding involved in cell-matrix adhesion (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); cell-substrate adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute retinal necrosis syndrome (ortholog); arteriosclerosis (ortholog); Behcet's disease (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); basal part of cell (ortholog) NW_004955446 14309516 14421991 - 102026486 AGCD01040275;AGCD01040276;AGCD01040277;GBDJ01139428;XM_005392725 XP_005392782 MODEL 9034033 protein-coding Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ENCODES a protein that exhibits IMP cyclohydrolase activity (ortholog); phosphoribosylaminoimidazolecarboxamide formyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH AICAR Transformylase Inosine Monophosphate Cyclohydrolase Deficiency (ortholog); blindness (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog) NW_004955457 704213 729702 - 102020089 AGCD01046712;AGCD01046713;GBBH01163375;GBDJ01175754;XM_005396914 XP_005396971 MODEL 8773861 protein-coding Gpr171 G protein-coupled receptor 171 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); neuropeptide binding (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of myeloid cell differentiation (ortholog); FOUND IN plasma membrane (ortholog) NW_004955448 2335560 2341261 - 102003501 AGCD01041281;GBDK01265611;XM_005393029 XP_005393086 MODEL 8959917 protein-coding Pou2f3 POU class 2 homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); epidermis development (ortholog); keratinocyte differentiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955412 21261389 21339602 + 102010884 AGCD01013020;AGCD01013021;GBCE01142334;XM_005378347;XM_013511247 XP_005378404;XP_013366701 MODEL 8900821 protein-coding Dock2 dedicator of cytokinesis 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); T cell receptor binding (ortholog); INVOLVED IN alpha-beta T cell activation (ortholog); alpha-beta T cell proliferation (ortholog); chemotaxis (ortholog); ASSOCIATED WITH esophagus adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); genetic disease (ortholog) NW_004955408 22630375 23059832 + 102014982 AGCD01008578;AGCD01008579;AGCD01008580;AGCD01008581;AGCD01008582;AGCD01008583;GBCE01104569;XM_005376310;XM_013509168 XP_005376367;XP_013364622 MODEL 8892070 protein-coding Hoxd11 homeobox D11 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); bone development disease (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955403 20541870 20556574 - 102005550 AGCD01002163;AGCD01002164;GBDJ01228027;XM_013514797 XP_013370251 MODEL 8904696 protein-coding Amph amphiphysin ENCODES a protein that exhibits phosphatase binding (ortholog); phospholipid binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN learning (ortholog); positive regulation of endocytosis (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955460 4804400 5024312 + 102020771 AGCD01048441;AGCD01048442;AGCD01048443;AGCD01048444;AGCD01048445;AGCD01048446;GBDF01211444;XM_005397735;XM_013521259;XM_013521260 XP_005397792;XP_013376713;XP_013376714 MODEL 8829652 protein-coding Fbp1 fructose-bisphosphatase 1 ENCODES a protein that exhibits AMP binding (ortholog); fructose 1,6-bisphosphate 1-phosphatase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular hyperosmotic salinity response (ortholog); cellular hypotonic salinity response (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; fructosuria pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Colonic Neoplasms (ortholog); fructose-1,6-bisphosphatase deficiency (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nucleus (ortholog) NW_004955422 21537337 21569174 - 102004174 AGCD01023124;AGCD01023125;AGCD01023126;GBDJ01189663;XM_005384677 XP_005384734 MODEL 8803570 pseudo LOC102010227 coenzyme Q-binding protein COQ10 homolog B, mitochondrial pseudogene NW_004955406 14637868 14638870 + 102010227 AGCD01005967 MODEL 8851192 protein-coding Exoc2 exocyst complex component 2 ENCODES a protein that exhibits protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane transport (ortholog); regulation of entry of bacterium into host cell (ortholog); vesicle docking involved in exocytosis (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND CEREBELLAR HYPOPLASIA (ortholog); prostate cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); exocyst (ortholog) NW_004955465 12327423 12457171 + 102029602 AGCD01050546;AGCD01050547;AGCD01050548;GBCB01028772;XM_005398935;XM_013521838 XP_005398992;XP_013377292 MODEL 8730363 protein-coding Bcl3 BCL3 transcription coactivator ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Dyslipidemias (ortholog); prion disease (ortholog); FOUND IN Bcl3-Bcl10 complex (ortholog); Bcl3/NF-kappaB2 complex (ortholog); cytoplasm (ortholog) NW_004955555 1898280 1911466 + 102020960 AGCD01073114;AGCD01073115;GBBH01139881;GBDK01193635;XM_005412543 XP_005412600 MODEL 8947158 protein-coding Eef1b2 eukaryotic translation elongation factor 1 beta 2 INVOLVED IN response to ethanol (ortholog); PARTICIPATES IN translation elongation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) NW_004955457 8835121 8837816 - 102017633 AGCD01046919;GBDF01003870;XM_005397000 XP_005397057 MODEL 9049951 protein-coding Synm synemin ENCODES a protein that exhibits intermediate filament binding (ortholog); structural constituent of cytoskeleton (ortholog); structural constituent of muscle (ortholog); INVOLVED IN fast-twitch skeletal muscle fiber contraction (ortholog); FOUND IN costamere (ortholog); intermediate filament (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955416 26554074 26579804 + 102018727 AGCD01017598;AGCD01017599;GBCE01037253;XM_013512539 XP_013367993 MODEL 39133399 snrna U4 U4 spliceosomal RNA 8867077 protein-coding Ntn4 netrin 4 ENCODES a protein that exhibits laminin-1 binding (ortholog); INVOLVED IN neuron remodeling (ortholog); regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN basement membrane (ortholog) NW_004955405 32080022 32182225 - 102006307 AGCD01005326;AGCD01005327;AGCD01005328;GBDI01292870;GBDK01069539;XM_013518478 XP_013373932 MODEL 10155441 protein-coding LOC106147181 WAS protein family homolog 1-like NW_004955524 1961089 1962402 - 106147181 AGCD01068788;GBCE01001398;GBDK01011082;XM_013507304 XP_013362758 MODEL 9048564 protein-coding Fndc11 fibronectin type III domain containing 11 ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) NW_004955528 670563 672995 - 102009102 AGCD01069541;GBDI01323623;XM_005409959 XP_005410016 MODEL 9030923 protein-coding Scrt1 scratch family transcriptional repressor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of neuron migration (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) NW_004955454 2948137 2953955 - 102028821 AGCD01045040;AGCD01045041;GBDF01045105;GBDF01261759;XM_013520102 XP_013375556 MODEL 153211025 protein-coding C2orf81 chromosome 2 open reading frame 81 8997720 protein-coding Rhbg Rh family B glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); transepithelial ammonium transport (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955545 2491417 2504013 + 102027116 AGCD01071906;AGCD01071907;GBCQ01000909;XM_005411675;XM_005411676;XM_013508364;XR_001232203 XP_005411732;XP_005411733;XP_013363818 MODEL 8715336 protein-coding Perp p53 apoptosis effector related to PMP22 INVOLVED IN amelogenesis (ortholog); desmosome organization (ortholog); heterotypic cell-cell adhesion (ortholog); ASSOCIATED WITH Erythrokeratodermia Variabilis et Progressiva 7 (ortholog); genetic disease (ortholog); Olmsted Syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); desmosome (ortholog); Golgi apparatus (ortholog) NW_004955436 21425321 21430780 + 102007150 AGCD01034054;GBCC01000076;GBDI01001313;XM_013516698 XP_013372152 MODEL 39133483 snrna U2 U2 spliceosomal RNA 9019344 protein-coding Higd2a HIG1 hypoxia inducible domain family member 2A INVOLVED IN mitochondrial respirasome assembly (ortholog); negative regulation of apoptotic process (ortholog); response to quercetin (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); pre-malignant neoplasm (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) NW_004955408 28689781 28690762 + 102010341 AGCD01008722;GBDF01010992;XM_005376374 XP_005376431 MODEL 8884691 protein-coding Gpr173 G protein-coupled receptor 173 ENCODES a protein that exhibits gonadotropin-releasing hormone receptor activity (ortholog); INVOLVED IN negative regulation of neuron migration (ortholog) NW_004955475 137239 158670 + 102010153 AGCD01054679;AGCD01054680;GBCE01167236;XM_005401475;XM_013502799 XP_005401532;XP_013358253 MODEL 8975974 protein-coding Wiz WIZ zinc finger ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); histone methyltransferase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of nuclear cell cycle DNA replication (ortholog); protein stabilization (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 7810145 7834908 + 102005610 AGCD01062166;AGCD01062167;AGCD01062168;GBBH01165686;GBDI01322868;XM_013505122 XP_013360576 MODEL 39132242 snrna U6 U6 spliceosomal RNA 8936224 protein-coding LOC102007212 C-reactive protein NW_004955468 11525824 11527555 - 102007212 AGCD01052134;XM_013522300 XP_013377754 MODEL 9048631 protein-coding Cd8a CD8 subunit alpha ENCODES a protein that exhibits identical protein binding (ortholog); MHC class I protein complex binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cytotoxic T cell differentiation (ortholog); defense response to virus (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); amphetamine abuse (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955424 952595 979159 + 102014798 AGCD01024225;AGCD01024226;AGCD01024227;GBDJ01073200;XM_005385387;XM_005385388;XM_005385389;XM_005385390 XP_005385444;XP_005385445;XP_005385446;XP_005385447 MODEL 8814966 protein-coding Rhce Rh blood group CcEe antigens ASSOCIATED WITH congenital hemolytic anemia (ortholog); megacolon (ortholog); Rh-Null Disease, Amorph Type (ortholog); FOUND IN ankyrin-1 complex (ortholog) NW_004955452 4912882 4956174 - 102007179 AGCD01044001;AGCD01044002;AGCD01044003;GBDF01248710;XM_005394822;XM_013519668 XP_005394879;XP_013375122 MODEL 8777359 pseudo LOC102028853 nuclease-sensitive element-binding protein 1 pseudogene NW_004955474 2144201 2159913 + 102028853 AGCD01054280;AGCD01054281 MODEL 8857761 protein-coding Txlna taxilin alpha INVOLVED IN B cell activation (ortholog); FOUND IN cytoplasm (ortholog) NW_004955452 10548858 10565996 + 102016125 AGCD01044280;GBBH01062319;XM_005395044;XM_005395045;XM_005395046;XM_005395048 XP_005395101;XP_005395102;XP_005395103;XP_005395105 MODEL 8991337 protein-coding Trdn triadin ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); endoplasmic reticulum membrane organization (ortholog); heart contraction (ortholog); ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia (ortholog); catecholaminergic polymorphic ventricular tachycardia 1 (ortholog); catecholaminergic polymorphic ventricular tachycardia 5 (ortholog); FOUND IN calcium channel complex (ortholog); junctional membrane complex (ortholog); junctional sarcoplasmic reticulum membrane (ortholog) NW_004955436 4963945 5266727 - 102027896 AGCD01033674;AGCD01033675;AGCD01033676;AGCD01033677;GBDI01303360;XM_005389153 XP_005389210 MODEL 8917430 pseudo LOC102011002 dolichol-phosphate mannosyltransferase subunit 1 pseudogene NW_004955416 12229992 12241469 - 102011002 AGCD01017202 MODEL 8700353 protein-coding Klhdc8a kelch domain containing 8A NW_004955406 41080154 41087381 - 102008180 AGCD01006670;GBCQ01093234;XM_005375356 XP_005375413 MODEL 8998624 protein-coding Eef1d eukaryotic translation elongation factor 1 delta ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to ionizing radiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH chromosome 5q deletion syndrome (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); fibrillar center (ortholog) NW_004955454 2284892 2299169 - 102005558 AGCD01045015;GBCQ01000760;XM_013520018;XM_013520019;XM_013520020;XM_013520021;XM_013520022;XM_013520023;XM_013520024;XM_013520025 XP_013375472;XP_013375473;XP_013375474;XP_013375475;XP_013375476;XP_013375477;XP_013375478;XP_013375479 MODEL 8788947 protein-coding Tmem86b transmembrane protein 86B ENCODES a protein that exhibits alkenylglycerophosphocholine hydrolase activity (ortholog); D-lysine 5,6-aminomutase activity (ortholog); identical protein binding (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955567 985793 987673 + 102030132 AGCD01074450;GBDI01314542;XM_005413346 XP_005413403 MODEL 9043330 protein-coding Plppr3 phospholipid phosphatase related 3 NW_004955495 6980213 6990331 + 102020352 AGCD01062108;AGCD01062109;GBDI01386422;XM_013505337 XP_013360791 MODEL 9050678 ncrna LOC102022619 uncharacterized LOC102022619 NW_004955424 13326259 13331941 - 102022619 AGCD01024630;GBDK01228314;XR_261059;XR_261060 MODEL 8791970 protein-coding Gins4 GINS complex subunit 4 INVOLVED IN DNA replication (ortholog); inner cell mass cell proliferation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955536 1360811 1375691 - 102015047 AGCD01070756;GBDF01159836;XM_005410531;XM_013507727 XP_005410588;XP_013363181 MODEL 8723925 protein-coding Fbp2 fructose-bisphosphatase 2 ENCODES a protein that exhibits fructose 1,6-bisphosphate 1-phosphatase activity (ortholog); identical protein binding (ortholog); INVOLVED IN gluconeogenesis (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Childhood-Onset Remitting Leukodystrophy (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog) NW_004955422 21508906 21530296 - 102003883 AGCD01023124;GBDI01078846;XM_005384676 XP_005384733 MODEL 8901654 protein-coding Nckap1 NCK associated protein 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN apical protein localization (ortholog); basal protein localization (ortholog); cell migration involved in gastrulation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN filamentous actin (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) NW_004955403 14476689 14554380 + 102028709 AGCD01002021;AGCD01002022;AGCD01002023;AGCD01002024;AGCD01002025;GBCC01000299;XM_013514746 XP_013370200 MODEL 8879513 protein-coding LOC102010229 keratin-associated protein 20-2-like NW_004955407 30229986 30230156 + 102010229 AGCD01007628;XM_005375650 XP_005375707 MODEL 39133732 mirna MIR598 microRNA 598 8787307 pseudo LOC102024329 cullin-2-like NW_004955471 7469519 7509567 - 102024329 AGCD01053150;AGCD01053151;AGCD01053152;AGCD01053153 MODEL 8770878 protein-coding Bpifa1 BPI fold containing family A member 1 INVOLVED IN killing of cells of another organism; positive regulation of acute inflammatory response; surfactant homeostasis; ASSOCIATED WITH Inflammation; fetal alcohol spectrum disorder (ortholog); otitis media (ortholog); FOUND IN extracellular space; extracellular region (ortholog); microvillus (ortholog) NW_004955422 28063077 28069939 - 102030434 AGCD01023343;FJ830605;GBBH01004310;NM_001282365;XM_013513811;XM_013513812;XM_013513813 ACZ02414;NP_001269294;XP_013369265;XP_013369266;XP_013369267 PROVISIONAL 8796778 protein-coding Adgrf3 adhesion G protein-coupled receptor F3 NW_004955469 8280131 8291512 - 102010987 AGCD01052460;AGCD01052461;XM_013522571 XP_013378025 MODEL 8906414 protein-coding Tspyl1 TSPY like 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); gonadal dysgenesis (ortholog); sudden infant death syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955526 539178 552120 + 102011239 AGCD01069240;GBDI01081447;XM_013507351 XP_013362805 MODEL 8769880 protein-coding Exoc3 exocyst complex component 3 PARTICIPATES IN E-cadherin signaling pathway; insulin signaling pathway; FOUND IN presynaptic membrane (ortholog) NW_004955504 195743 223812 + 102020356 AGCD01064816;GBDF01047252;XM_005406996;XM_005406997;XM_005406998;XM_013505897 XP_005407053;XP_005407054;XP_005407055;XP_013361351 MODEL 9035500 protein-coding LOC102020122 complement C5-like NW_004955419 6905871 6946488 + 102020122 AGCD01019866;AGCD01019867;GBCB01062706;XM_005382576;XM_005382577;XM_005382578 XP_005382633;XP_005382634;XP_005382635 MODEL 9056748 protein-coding Bcl6 BCL6 transcription repressor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); B cell differentiation (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); diffuse large B-cell lymphoma (ortholog); Gastrointestinal Hemorrhage (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); paraspeckles (ortholog) NW_004955420 19998960 20021200 + 102023603 AGCD01021070;GBCQ01038861;XM_005383244;XM_005383245;XM_005383246;XM_005383247;XM_005383248;XM_013513551 XP_005383301;XP_005383302;XP_005383303;XP_005383304;XP_005383305;XP_013369005 MODEL 8791010 protein-coding Axin2 axin 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); I-SMAD binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); bone mineralization (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Animal Disease Models (ortholog); anodontia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2J (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955478 4952551 4982223 - 102005373 AGCD01055860;GBDJ01272005;GBDK01279480;XM_013503241 XP_013358695 MODEL 8905934 protein-coding Pias4 protein inhibitor of activated STAT 4 ENCODES a protein that exhibits DNA binding (ortholog); SUMO ligase activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN central nervous system development (ortholog); hair follicle development (ortholog); limb epidermis development (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; Jak-Stat signaling pathway; type II interferon signaling pathway; FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) NW_004955495 4760576 4791422 - 102015025 AGCD01061946;AGCD01061947;AGCD01061948;GBDI01227492;XM_005405818;XM_013505234 XP_005405875;XP_013360688 MODEL 8854175 protein-coding Ptprr protein tyrosine phosphatase receptor type R ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN ERBB2 signaling pathway (ortholog); in utero embryonic development (ortholog); negative regulation of epithelial cell migration (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955405 10767548 11133695 - 102029696 AGCD01004822;AGCD01004823;AGCD01004824;AGCD01004825;AGCD01004826;AGCD01004827;GBDJ01213984;XM_005374316;XM_005374317 XP_005374373;XP_005374374 MODEL 8701593 protein-coding Itga2b integrin subunit alpha 2b ENCODES a protein that exhibits cell adhesion receptor activity (ortholog); extracellular matrix binding (ortholog); fibrinogen binding (ortholog); INVOLVED IN cell-cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); heterotypic cell-cell adhesion (ortholog); PARTICIPATES IN abciximab pharmacodynamics pathway; ephrin - ephrin receptor bidirectional signaling axis; eptifibatide pharmacodynamics pathway; ASSOCIATED WITH carotid artery thrombosis (ortholog); Cerebral Hemorrhage (ortholog); Endotoxemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) NW_004955451 17381323 17392122 - 102007079 AGCD01043747;AGCD01043748;AGCD01043749;GBDI01168281;GBDK01190451;XM_013519265 XP_013374719 MODEL 9030809 protein-coding Synpo synaptopodin ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN positive regulation of actin filament bundle assembly (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); regulation of long-term neuronal synaptic plasticity (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); focal segmental glomerulosclerosis 8 (ortholog); glomerulosclerosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cell periphery (ortholog); cytosol (ortholog) NW_004955415 3929781 3977769 - 102025681 AGCD01015959;AGCD01015960;AGCD01015961;AGCD01015962;GBBH01187369;GBDJ01420980;XM_013512349 XP_013367803 MODEL 8922882 protein-coding Arhgap18 Rho GTPase activating protein 18 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of actin cytoskeleton organization (ortholog); regulation of actin filament polymerization (ortholog); regulation of cell motility (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); cytosol (ortholog) NW_004955436 10470398 10642890 - 102014824 AGCD01033785;AGCD01033786;AGCD01033787;AGCD01033788;AGCD01033789;GBBH01088499;XM_005389187;XM_005389189;XM_005389190;XM_013516675 XP_005389244;XP_005389246;XP_005389247;XP_013372129 MODEL 39133401 snrna U4 U4 spliceosomal RNA 8738857 protein-coding LOC102004372 intelectin-1a NW_004955468 12649293 12708557 - 102004372 AGCD01052172;AGCD01052173;AGCD01052174;AGCD01052175;AGCD01052176;AGCD01052177;AGCD01052178;AGCD01052179;AGCD01052180;AGCD01052181;GBBH01135202;GBDF01177021;XM_013522493 XP_013377947 MODEL 10196422 ncrna LOC106147182 uncharacterized LOC106147182 NW_004955524 323509 327068 - 106147182 AGCD01068675;GBDK01378451;XR_001231957 MODEL 8965498 protein-coding Fndc3a fibronectin type III domain containing 3A INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955431 2553311 2696596 + 102019193 AGCD01029934;AGCD01029935;AGCD01029936;AGCD01029937;GBDF01080939;XM_005387570;XM_005387571;XM_005387573;XM_005387574 XP_005387627;XP_005387628;XP_005387630;XP_005387631 MODEL 8760578 protein-coding Aip AHR interacting HSP90 co-chaperone ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); enzyme binding (ortholog); GAF domain binding (ortholog); INVOLVED IN obsolete protein targeting to mitochondrion (ortholog); protein maturation (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); adenoma (ortholog); Familial Isolated Pituitary Adenoma (ortholog); FOUND IN aryl hydrocarbon receptor complex (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955422 17997683 18003888 - 102014576 AGCD01022934;GBBH01090969;GBDF01044027;XM_005384314 XP_005384371 MODEL 8982554 protein-coding LOC102018708 free fatty acid receptor 2 NW_004955468 4681077 4683818 + 102018708 AGCD01051919;XM_005400052;XM_013522278;XM_013522279 XP_005400109;XP_013377732;XP_013377733 MODEL 8859926 protein-coding Ccl28 C-C motif chemokine ligand 28 ENCODES a protein that exhibits chemokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell chemotaxis (ortholog); negative regulation of leukocyte tethering or rolling (ortholog); ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); bronchial disease (ortholog); FOUND IN extracellular space (ortholog); secretory granule (ortholog) NW_004955446 18902465 18925178 + 102004434 AGCD01040418;GBBH01102278;XM_013518448 XP_013373902 MODEL 8861842 protein-coding Chrm5 cholinergic receptor muscarinic 5 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN dopamine transport (ortholog); regulation of phosphatidylinositol dephosphorylation (ortholog); transmission of nerve impulse (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis dependence (ortholog); Cocaine-Related Disorders (ortholog) NW_004955416 526718 528353 - 102022696 AGCD01016810;XM_005381165 XP_005381222 MODEL 8757047 protein-coding Pes1 pescadillo ribosomal biogenesis factor 1 INVOLVED IN cell population proliferation (ortholog); maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); nucleolus (ortholog) NW_004955455 4794189 4808235 - 102023433 AGCD01045688;GBDF01084939;XM_005396270 XP_005396327 MODEL 8893167 protein-coding LOC102017519 vomeronasal type-1 receptor 4-like NW_004955569 1106829 1110875 + 102017519 AGCD01074638;XM_005413518 XP_005413575 MODEL 8819623 protein-coding Wls Wnt ligand secretion mediator ENCODES a protein that exhibits identical protein binding (ortholog); mu-type opioid receptor binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cementum mineralization (ortholog); exocrine pancreas development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Zaki syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); dendrite cytoplasm (ortholog) NW_004955423 23374401 23465308 + 102013625 AGCD01024005;GBDK01002213;XM_005385271 XP_005385328 MODEL 10082243 ncrna LOC106150151 uncharacterized LOC106150151 NW_004955466 5399885 5402744 + 106150151 AGCD01050879;GBDF01176513;XR_001236783 MODEL 8728731 pseudo LOC102004739 olfactory receptor 8J1-like NW_004955511 1437243 1438189 + 102004739 AGCD01066367 MODEL 8901837 protein-coding Tle5 TLE family member 5, transcriptional modulator ENCODES a protein that exhibits identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH colon cancer (ortholog); Myocardial Ischemia (ortholog); prostate cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955495 5328299 5336195 + 102011556 AGCD01062000;GBCE01002154;GBDI01010761;XM_013505260 XP_013360714 MODEL 8931319 protein-coding Rhcg Rh family C glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); intracellular monoatomic ion homeostasis (ortholog); regulation of pH (ortholog); ASSOCIATED WITH Hypoaldosteronism (ortholog); hypokalemia (ortholog); kidney failure (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955416 15639425 15657708 + 102028747 AGCD01017336;AGCD01017337;AGCD01017338;GBDI01026790;XM_005381554 XP_005381611 MODEL 9030682 protein-coding Atl1 atlastin GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN axonogenesis (ortholog); endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); hereditary sensory neuropathy type 1D (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955409 12222591 12301990 - 102022054 AGCD01009541;AGCD01009542;AGCD01009543;AGCD01009544;AGCD01009545;AGCD01009546;GBDF01044331;XM_005376821;XM_005376822 XP_005376878;XP_005376879 MODEL 8891171 protein-coding Bpifa3 BPI fold containing family A member 3 NW_004955422 28076137 28087162 - 102003034 AGCD01023343;GBDF01046147;XM_005384851 XP_005384908 MODEL 39131400 protein-coding NTN5 netrin 5 8918116 protein-coding Klhdc8b kelch domain containing 8B INVOLVED IN mitotic cytokinetic process (ortholog); mitotic nuclear division (ortholog); nuclear chromosome segregation (ortholog); ASSOCIATED WITH Hodgkin's lymphoma (ortholog); FOUND IN cellularization cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955532 1158888 1162710 + 102011144 AGCD01070167;GBCQ01092730;GBDI01121619;XM_013507665 XP_013363119 MODEL 8920304 protein-coding Dock3 dedicator of cytokinesis 3 ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955532 2616700 3073926 + 102009542 AGCD01070240;AGCD01070241;AGCD01070242;AGCD01070243;AGCD01070244;AGCD01070245;AGCD01070246;AGCD01070247;AGCD01070248;AGCD01070249;AGCD01070250;AGCD01070251;AGCD01070252;AGCD01070253;AGCD01070254;AGCD01070255;AGCD01070256;AGCD01070257;AGCD01070258;AGCD01070259;AGCD01070260;AGCD01070261;AGCD01070262;AGCD01070263;AGCD01070264;AGCD01070265;GBDF01221875;GBDF01221881;XM_005410370;XM_013507620;XM_013507621;XM_013507622;XM_013507623;XM_013507624 XP_005410427;XP_013363074;XP_013363075;XP_013363076;XP_013363077;XP_013363078 MODEL 9065935 protein-coding Hoxd12 homeobox D12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic digit morphogenesis (ortholog); pattern specification process (ortholog); skeletal system development (ortholog); ASSOCIATED WITH clubfoot (ortholog); Congenital Limb Deformities (ortholog); melanoma (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955403 20562248 20563205 - 102011932 AGCD01002165;XM_005373416 XP_005373473 MODEL 9039742 protein-coding Pm20d1 peptidase M20 domain containing 1 ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); amino acid metabolic process (ortholog); energy homeostasis (ortholog); FOUND IN extracellular space (ortholog) NW_004955406 41522800 41544332 - 102014210 AGCD01006685;GBDI01244269;XM_005375377 XP_005375434 MODEL 8812769 protein-coding Hikeshi heat shock protein nuclear import factor hikeshi ENCODES a protein that exhibits Hsp70 protein binding (ortholog); nuclear import signal receptor activity (ortholog); INVOLVED IN cellular response to heat (ortholog); Golgi organization (ortholog); lung development (ortholog); ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 13 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955414 6632434 6656633 - 102011757 AGCD01014925;AGCD01014926;GBCQ01041070;XM_005379746;XM_013511799;XM_013511800 XP_005379803;XP_013367253;XP_013367254 MODEL 8764683 protein-coding Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); progeria (ortholog); stomach cancer (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955465 5878055 5895232 + 102025223 AGCD01050433;GBDF01126485;XM_005398844;XM_005398845;XR_001236757;XR_263242 XP_005398901;XP_005398902 MODEL 39132246 snrna U6 U6 spliceosomal RNA 8719081 protein-coding C3 complement C3 ENCODES a protein that exhibits antigen binding (ortholog); C5L2 anaphylatoxin chemotactic receptor binding (ortholog); chemokine activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); B cell activation (ortholog); complement activation (ortholog); PARTICIPATES IN classical complement pathway; ASSOCIATED WITH otitis media; acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cell surface (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); cytoplasmic side of Golgi membrane (ortholog) NW_004955495 2796601 2824233 + 102006475 AGCD01061799;AGCD01061800;AGCD01061801;AGCD01061802;GBDJ01009718;XM_005405700 XP_005405757 MODEL 8969719 protein-coding Gpr174 G protein-coupled receptor 174 ENCODES a protein that exhibits bioactive lipid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN negative regulation of interleukin-2 production (ortholog); T cell homeostasis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955557 2071792 2102865 + 102024289 AGCD01073322;GBDK01300605;XM_005412641;XM_005412642;XM_005412643 XP_005412698;XP_005412699;XP_005412700 MODEL 8907598 pseudo LOC102007214 treacle protein pseudogene NW_004955413 22801161 22804226 + 102007214 AGCD01014317 MODEL 9032840 protein-coding LOC102004375 olfactory receptor 51Q1-like NW_004955414 21317366 21326113 + 102004375 AGCD01015412;AGCD01015413;AGCD01015414;XM_005380083 XP_005380140 MODEL 8924801 ncrna LOC102028860 uncharacterized LOC102028860 NW_004955482 996337 997740 - 102028860 AGCD01057197;GBDF01144568;XR_263815 MODEL 150537102 mirna MIR599 microRNA 599 8909067 protein-coding Cd8b CD8 subunit beta INVOLVED IN T cell activation (ortholog); T cell receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) NW_004955424 922916 939469 + 102014463 AGCD01024223;GBDK01430415;XM_005385386 XP_005385443 MODEL 9060342 protein-coding Pou3f2 POU class 3 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte development (ortholog); cerebral cortex radially oriented cell migration (ortholog); epidermis development (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955411 24714899 24722048 + 102021860 AGCD01012136;AGCD01012137;XM_005377797 XP_005377854 MODEL 8873709 protein-coding Txlnb taxilin beta FOUND IN cytoplasm (ortholog) NW_004955436 20442605 20481758 + 102012471 AGCD01034024;GBCB01005309;XM_005389259 XP_005389316 MODEL 9002502 protein-coding Fbrs fibrosin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN extracellular space (ortholog) NW_004955493 7520982 7530862 + 102019509 AGCD01061197;GBDI01064934;GBDI01064951;XM_013504761 XP_013360215 MODEL 8853044 ncrna LOC102020125 uncharacterized LOC102020125 NW_004955420 18987041 18989955 - 102020125 AGCD01021053;GBDF01288419;XR_260723 MODEL 39133484 snrna U2 U2 spliceosomal RNA 8895668 protein-coding Adgrf4 adhesion G protein-coupled receptor F4 INVOLVED IN erythrocyte development (ortholog); gene expression (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH schizophrenia (ortholog) NW_004955437 12127365 12147227 + 102013005 AGCD01034598;GBCC01026570;XM_005389878;XM_013516712 XP_005389935;XP_013372166 MODEL 8807714 protein-coding Npffr2 neuropeptide FF receptor 2 ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); INVOLVED IN neuropeptide signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955447 1112856 1205051 - 102020065 AGCD01040495;AGCD01040496;AGCD01040497;AGCD01040498;AGCD01040499;GBCQ01013957;XM_005392769 XP_005392826 MODEL 9030847 protein-coding Scrt2 scratch family transcriptional repressor 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of neuron migration (ortholog); FOUND IN nucleus (ortholog) NW_004955597 504160 515609 - 102027133 AGCD01076558;AGCD01076559;XM_013510024 XP_013365478 MODEL 8835286 protein-coding Atl2 atlastin GTPase 2 ENCODES a protein that exhibits GTPase-dependent fusogenic activity (ortholog); INVOLVED IN endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network membrane (ortholog) NW_004955441 6004209 6034484 - 102009547 AGCD01036895;AGCD01036896;AGCD01036897;GBCC01008708;XM_005390883 XP_005390940 MODEL 39133403 snrna U4 U4 spliceosomal RNA 8840277 ncrna LOC102022620 uncharacterized LOC102022620 NW_004955425 15875825 15959149 - 102022620 AGCD01025593;AGCD01025594;GBDF01249927;XR_001234296 MODEL 8720519 protein-coding Gip gastric inhibitory polypeptide ENCODES a protein that exhibits gastric inhibitory polypeptide receptor binding (ortholog); receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); digestive system development (ortholog); ASSOCIATED WITH Anorexia (ortholog); autonomic nervous system disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular space (ortholog); neuronal cell body (ortholog) NW_004955451 12390938 12396599 + 102014635 AGCD01043392;GBDF01099659;XM_005394598 XP_005394655 MODEL 8713235 protein-coding Nckap1l NCK associated protein 1 like ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase activator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin polymerization-dependent cell motility (ortholog); B cell homeostasis (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); immunodeficiency 72 (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); SCAR complex (ortholog) NW_004955458 1733799 1785591 + 102008293 AGCD01047202;AGCD01047203;AGCD01047204;GBDF01307320;XM_005397228 XP_005397285 MODEL 8968174 protein-coding LOC102010231 uncharacterized LOC102010231 NW_004955408 30891040 30894592 + 102010231 AGCD01008817;GBDF01045340;XM_005376478;XR_259728 XP_005376535 MODEL 8707172 pseudo LOC102007219 tRNA methyltransferase 10 homolog B pseudogene NW_004955472 2140534 2143118 - 102007219 AGCD01053437 MODEL 8764159 protein-coding LOC102004376 olfactory receptor 2D3-like NW_004955414 22643659 22649023 - 102004376 AGCD01015468;XM_013511769;XM_013511770 XP_013367223;XP_013367224 MODEL 8712693 protein-coding Exoc3l1 exocyst complex component 3 like 1 INVOLVED IN exocytosis (ortholog); peptide hormone secretion (ortholog); FOUND IN exocyst (ortholog); secretory granule (ortholog) NW_004955484 9429578 9434982 + 102013087 AGCD01058415;GBDJ01264398;XM_005403687;XM_013503982;XM_013503983;XM_013503984 XP_005403744;XP_013359436;XP_013359437;XP_013359438 MODEL 8823831 protein-coding Bcl6b BCL6B transcription repressor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) NW_004955467 9900392 9906610 - 102006326 AGCD01051535;GBDJ01140936;XM_005399571;XM_013522100 XP_005399628;XP_013377554 MODEL 8920561 pseudo LOC102018266 suppressor of cytokine signaling 2 pseudogene NW_004955409 12562778 12566437 - 102018266 AGCD01009552 MODEL 8851127 protein-coding Pibf1 progesterone immunomodulatory binding factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); interleukin-4 receptor binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); cilium assembly (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Dandy-Walker syndrome (ortholog); Encephalocele (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); extracellular space (ortholog) NW_004955404 33713903 33897622 - 102026181 AGCD01004078;AGCD01004079;AGCD01004080;AGCD01004081;AGCD01004082;AGCD01004083;GBCQ01006314;XM_005374185;XM_005374186;XM_005374187;XM_013516628 XP_005374242;XP_005374243;XP_005374244;XP_013372082 MODEL 8840983 protein-coding Tmem87a transmembrane protein 87A ENCODES a protein that exhibits mechanosensitive potassium channel activity (ortholog); voltage-gated monoatomic anion channel activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); detection of mechanical stimulus involved in sensory perception of touch (ortholog); intracellular pH reduction (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi cisterna membrane (ortholog); Golgi membrane (ortholog) NW_004955416 8938758 8990800 - 102019596 AGCD01017071;AGCD01017072;GBDK01145654;XM_005381329;XM_005381330;XR_001233300;XR_001233301;XR_001233302 XP_005381386;XP_005381387 MODEL 10076480 protein-coding LOC106147183 zinc finger protein 829-like NW_004955524 346930 348430 - 106147183 AGCD01068675;XM_013507305 XP_013362759 MODEL 8747959 protein-coding Odad1 outer dynein arm docking complex subunit 1 INVOLVED IN cilium movement (ortholog); outer dynein arm assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); outer dynein arm (ortholog) NW_004955559 2123941 2153192 + 102022644 AGCD01073691;AGCD01073692;AGCD01073693;AGCD01073694;AGCD01073695;GBBH01092189;GBDF01081695;XM_013509041;XM_013509042 XP_013364495;XP_013364496 MODEL 8870228 protein-coding Aipl1 AIP like 1 HSP90 co-chaperone ENCODES a protein that exhibits farnesylated protein binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); phototransduction, visible light (ortholog); protein farnesylation (ortholog); ASSOCIATED WITH blindness (ortholog); cone-rod dystrophy 2 (ortholog); Eye Abnormalities (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); photoreceptor inner segment (ortholog) NW_004955467 11952940 11962147 - 102005456 AGCD01051621;XM_005399662 XP_005399719 MODEL 39132256 snrna U6 U6 spliceosomal RNA 8766000 protein-coding Ccl5 C-C motif chemokine ligand 5 ENCODES a protein that exhibits CCR1 chemokine receptor binding (ortholog); CCR5 chemokine receptor binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell-cell signaling (ortholog); cellular response to alkyl hydroperoxide (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); membrane (ortholog) NW_004955481 10293758 10301118 - 102022390 AGCD01057139;GBDK01092156;XM_005402897 XP_005402954 MODEL 8788608 pseudo LOC102017523 KATNB1-like protein 1 pseudogene NW_004955448 11305449 11307654 + 102017523 AGCD01041522 MODEL 8933303 protein-coding Treh trehalase ENCODES a protein that exhibits alpha,alpha-trehalase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); trehalose catabolic process (ortholog); PARTICIPATES IN trehalose degradation pathway; ASSOCIATED WITH Trehalase Deficiency (ortholog) NW_004955412 19801153 19815394 - 102016901 AGCD01012978;GBCE01024811;XM_005378269;XM_005378270;XM_005378271;XM_005378273 XP_005378326;XP_005378327;XP_005378328;XP_005378330 MODEL 8923475 protein-coding Eef1g eukaryotic translation elongation factor 1 gamma INVOLVED IN response to virus (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955599 607021 615662 + 102016438 AGCD01076661;GBDF01002505;XM_005414794 XP_005414851 MODEL 10066196 ncrna LOC106150152 uncharacterized LOC106150152 NW_004955466 1839722 1842302 + 106150152 AGCD01050718;GBCE01181594;XR_001236792 MODEL 8727485 protein-coding Tspyl2 TSPY like 2 INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA replication (ortholog); regulation of protein kinase activity (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955475 160768 167359 + 102010477 AGCD01054680;GBBH01208279;XM_005401476 XP_005401533 MODEL 616940636 mirna MIR652 microRNA 652 9029748 protein-coding Rheb Ras homolog, mTORC1 binding ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of cold-induced thermogenesis (ortholog); positive regulation of oligodendrocyte differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; Rheb mediated signaling pathway; ASSOCIATED WITH epilepsy (ortholog); Hemimegalencephaly (ortholog); intellectual disability (ortholog); FOUND IN dendrite (ortholog); endomembrane system (ortholog); glutamatergic synapse (ortholog) NW_004955491 5795040 5833897 - 102003454 AGCD01060503;AGCD01060504;AGCD01060505;GBBH01062052;XM_013504611 XP_013360065 MODEL 8850321 protein-coding Synpo2 synaptopodin 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); alpha-actinin binding (ortholog); filamin binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); chaperone-mediated autophagy (ortholog); obsolete regulation of Rho-dependent protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH ovarian carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); focal adhesion (ortholog); nucleus (ortholog) NW_004955428 21152210 21323254 - 102025603 AGCD01028133;AGCD01028134;AGCD01028135;GBDJ01019222;XM_005386805;XM_013515263 XP_005386862;XP_013370717 MODEL 8871000 protein-coding Nckap5 NCK associated protein 5 ASSOCIATED WITH amenorrhea (ortholog); proteinuria (ortholog) NW_004955440 266389 1159224 - 102029122 AGCD01036160;AGCD01036161;AGCD01036162;AGCD01036163;AGCD01036164;AGCD01036165;AGCD01036166;AGCD01036167;AGCD01036168;AGCD01036169;AGCD01036170;AGCD01036171;AGCD01036172;AGCD01036173;AGCD01036174;AGCD01036175;AGCD01036176;GBDK01133273;XM_005390736;XM_013517461;XM_013517462;XM_013517463 XP_005390793;XP_013372915;XP_013372916;XP_013372917 MODEL 8999017 protein-coding Pou3f4 POU class 3 homeobox 4 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); minor groove of adenine-thymine-rich DNA binding (ortholog); INVOLVED IN cochlea morphogenesis (ortholog); forebrain neuron differentiation (ortholog); inner ear development (ortholog); ASSOCIATED WITH Deafness (ortholog); Ependymomas (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955529 2726121 2727311 + 102020605 AGCD01069754;GBCB01037300;XM_005410076 XP_005410133 MODEL 8808493 protein-coding Plppr4 phospholipid phosphatase related 4 ENCODES a protein that exhibits lipid phosphatase activity (ortholog); lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN axonogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); inner ear development (ortholog); FOUND IN external side of plasma membrane (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955435 4085918 4112207 + 102021275 AGCD01032819;GBDF01303712;XM_005389095 XP_005389152 MODEL 10210369 ncrna LOC106150153 uncharacterized LOC106150153 NW_004955466 1789546 1799359 - 106150153 AGCD01050717;GBBH01146369;XR_001236793 MODEL 8800041 pseudo LOC102020127 afadin- and alpha-actinin-binding protein-like NW_004955487 8077337 8080047 + 102020127 AGCD01059424 MODEL 8880931 protein-coding Bpifb1 BPI fold containing family B member 1 INVOLVED IN innate immune response in mucosa (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 27955298 27976051 - 102029304 AGCD01023340;GBDI01017648;XM_005384845;XM_005384846 XP_005384902;XP_005384903 MODEL 8832479 protein-coding LOC102018270 uncharacterized LOC102018270 NW_004955465 3342697 3344495 + 102018270 AGCD01050375;GBDF01176710;XM_005398979 XP_005399036 MODEL 8873519 protein-coding Proc protein C, inactivator of coagulation factors Va and VIIIa ENCODES a protein that exhibits identical protein binding (ortholog); oligopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN liver development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of blood coagulation (ortholog); PARTICIPATES IN coagulation cascade pathway; protease mediated signaling via protease-activated receptor 1; protein C anticoagulant pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) NW_004955459 3097229 3105566 - 102004570 AGCD01048008;GBDJ01271470;XM_005397611;XM_005397612;XM_005397613;XM_005397614;XM_013521066;XM_013521067 XP_005397668;XP_005397669;XP_005397670;XP_005397671;XP_013376520;XP_013376521 MODEL 8734711 protein-coding Fndc3b fibronectin type III domain containing 3B INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955420 2173804 2435324 + 102028420 AGCD01020588;AGCD01020589;AGCD01020590;AGCD01020591;AGCD01020592;AGCD01020593;AGCD01020594;AGCD01020595;GBDF01248543;XM_005383007;XM_013513455 XP_005383064;XP_013368909 MODEL 8963225 protein-coding Chrna1 cholinergic receptor nicotinic alpha 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); muscle cell cellular homeostasis (ortholog); musculoskeletal movement (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH autistic disorder (ortholog); centronuclear myopathy (ortholog); congenital myasthenic syndrome (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955449 661310 683873 + 102005534 AGCD01041771;GBBH01129594;XM_005393183 XP_005393240 MODEL 39133405 snrna U4 U4 spliceosomal RNA 9026055 protein-coding Hilpda hypoxia inducible lipid droplet associated ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN autocrine signaling (ortholog); cellular response to hypoxia (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); lung metastasis (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); lipid droplet (ortholog) NW_004955479 9453627 9455680 + 102026862 AGCD01056471;GBDF01120036;XM_005402373 XP_005402430 MODEL 8757948 protein-coding C3ar1 complement C3a receptor 1 ENCODES a protein that exhibits complement component C3a binding (ortholog); complement component C3a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); complement receptor mediated signaling pathway (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 6707003 6715689 - 102028398 AGCD01013772;GBBH01222006;XM_005378913;XM_005378914;XM_005378915;XM_013511497;XM_013511498 XP_005378970;XP_005378971;XP_005378972;XP_013366951;XP_013366952 MODEL 8906302 protein-coding Wnk1 WNK lysine deficient protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN Erk5 MAPK signaling pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); hereditary sensory and autonomic neuropathy type 2 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GABA-ergic synapse (ortholog) NW_004955454 6228492 6358690 - 102007507 AGCD01045225;AGCD01045226;AGCD01045227;AGCD01045228;AGCD01045229;AGCD01045230;GBDI01065217;XM_005395988;XM_005395991;XM_005395992;XM_005395993;XM_005395994;XM_005395996;XM_005395997;XM_005395999;XM_005396003;XM_013520148;XM_013520149;XM_013520150;XM_013520151;XM_013520152;XM_013520153;XM_013520155;XM_013520156;XM_013520157 XP_005396045;XP_005396048;XP_005396049;XP_005396050;XP_005396051;XP_005396053;XP_005396054;XP_005396056;XP_005396060;XP_013375602;XP_013375603;XP_013375604;XP_013375605;XP_013375606;XP_013375607;XP_013375609;XP_013375610;XP_013375611 MODEL 8884599 protein-coding LOC102004740 glycine N-acyltransferase-like protein Keg1 NW_004955511 3618873 3627363 - 102004740 AGCD01066468;GBCQ01042492;XM_005408043 XP_005408100 MODEL 8790519 protein-coding Axl AXL receptor tyrosine kinase ENCODES a protein that exhibits myosin heavy chain binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); apoptotic cell clearance (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN Gas6 - Axl signaling axis; ASSOCIATED WITH amenorrhea (ortholog); Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); plasma membrane (ortholog) NW_004955555 189445 218509 + 102011151 AGCD01073024;GBDK01005488;XM_005412322;XM_005412323 XP_005412379;XP_005412380 MODEL 8950854 protein-coding Gipc1 GIPC PDZ domain containing family member 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); myosin binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); chemical synaptic transmission (ortholog); endothelial cell migration (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH oculopharyngodistal myopathy 2 (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); cytoplasm (ortholog) NW_004955415 33067689 33077749 - 102016378 AGCD01016748;GBCB01058770;XM_005381102 XP_005381159 MODEL 8858332 protein-coding Ptprs protein tyrosine phosphatase receptor type S ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparin binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN cerebellum development (ortholog); cerebral cortex development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hearing Loss (ortholog); NATURAL KILLER CELL ENTEROPATHY (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density membrane (ortholog) NW_004955495 3943075 3991361 + 102029307 AGCD01061889;AGCD01061890;AGCD01061891;AGCD01061892;AGCD01061893;GBCB01088757;GBDF01128475;XM_013505293 XP_013360747 MODEL 8838142 protein-coding Cd9 CD9 molecule ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast carcinoma (ortholog); cervix carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955413 3891874 3924065 + 102011638 AGCD01013589;GBBH01004017;XM_005378756 XP_005378813 MODEL 8932356 protein-coding Sct secretin ENCODES a protein that exhibits digestive hormone activity (ortholog); G protein-coupled receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); dentate gyrus development (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); choledochal cyst (ortholog); polycystic ovary syndrome (ortholog); FOUND IN extracellular space (ortholog) NW_004955476 11433857 11434662 + 102011984 AGCD01055458;GBDF01151931;XM_005401907 XP_005401964 MODEL 8759915 protein-coding Dock4 dedicator of cytokinesis 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PDZ domain binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); negative regulation of vascular associated smooth muscle contraction (ortholog); positive regulation of vascular associated smooth muscle cell migration (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955410 15548041 15835382 - 102019675 AGCD01010933;AGCD01010934;AGCD01010935;AGCD01010936;AGCD01010937;AGCD01010938;AGCD01010939;AGCD01010940;GBBH01222099;GBDJ01213524;XM_013510564 XP_013366018 MODEL 8795030 protein-coding Pou4f1 POU class 4 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell migration in hindbrain (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); ATAXIA, INTENTION TREMOR, AND HYPOTONIA SYNDROME, CHILDHOOD-ONSET (ortholog); Uterine Cervical Dysplasia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); neuron projection (ortholog) NW_004955404 28812762 28818024 + 102023975 AGCD01003964;AGCD01003965;GBDF01291045;XM_005374236 XP_005374293 MODEL 9000332 ncrna LOC102018711 uncharacterized LOC102018711 NW_004955469 11293500 11308124 + 102018711 AGCD01052559;AGCD01052560;GBDF01306362;XR_263452 MODEL 10126347 ncrna LOC106150154 uncharacterized LOC106150154 NW_004955466 2283413 2331976 + 106150154 AGCD01050733;XR_001236794 MODEL 8760134 protein-coding LOC102024330 mas-related G-protein coupled receptor member X3-like NW_004955414 33545068 33545694 - 102024330 AGCD01015810;XM_013511746 XP_013367200 MODEL 9012536 protein-coding Picalm phosphatidylinositol binding clathrin assembly protein ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); clathrin binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); axonogenesis (ortholog); clathrin coat assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cell surface (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) NW_004955414 6871220 6970569 + 102013160 AGCD01014940;AGCD01014941;AGCD01014942;AGCD01014943;AGCD01014944;GBCE01054676;GBDF01008904;XM_005379748 XP_005379805 MODEL 9039786 protein-coding Synpo2l synaptopodin 2 like INVOLVED IN heart morphogenesis (ortholog); positive regulation of Rho protein signal transduction (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN nucleus (ortholog); Z disc (ortholog) NW_004955437 18177867 18186772 + 102015048 AGCD01034779;AGCD01034780;GBDF01020164;XM_005389968;XM_005389969 XP_005390025;XP_005390026 MODEL 9025322 protein-coding Rhebl1 RHEB like 1 ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); TOR signaling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955500 7894686 7898035 - 102014584 AGCD01063955;GBDF01077128;XM_005406691 XP_005406748 MODEL 8726017 protein-coding Nckap5l NCK associated protein 5 like INVOLVED IN microtubule bundle formation (ortholog); microtubule depolymerization (ortholog); FOUND IN centrosome (ortholog); microtubule plus-end (ortholog) NW_004955547 381338 416658 - 102007942 AGCD01072153;AGCD01072154;GBDJ01280139;XM_005411849;XM_005411850;XM_013508476;XM_013508477;XM_013508478 XP_005411906;XP_005411907;XP_013363930;XP_013363931;XP_013363932 MODEL 9008251 protein-coding Tmem87b transmembrane protein 87B INVOLVED IN retrograde transport, endosome to Golgi (ortholog) NW_004955470 1996728 2045427 - 102024214 AGCD01052668;AGCD01052669;AGCD01052670;GBBH01119559;GBCQ01038715;XM_013522751 XP_013378205 MODEL 8961284 protein-coding Tle6 TLE family member 6, subcortical maternal complex member ENCODES a protein that exhibits structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN actin filament organization (ortholog); embryonic process involved in female pregnancy (ortholog); endoplasmic reticulum localization (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 15 (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic lattice (ortholog) NW_004955495 5367237 5369601 - 102011885 AGCD01062002;GBDF01076043;XM_013505057 XP_013360511 MODEL 8971402 pseudo LOC102028862 heat shock 70 kDa protein 14 pseudogene NW_004955482 5978526 5979743 + 102028862 AGCD01057360 MODEL 8708380 pseudo LOC102010232 suppressor of cytokine signaling 5-like NW_004955458 3896343 3898873 + 102010232 AGCD01047353 MODEL 8905146 pseudo LOC102016712 leydig cell tumor 10 kDa protein homolog pseudogene NW_004955419 3075107 3075913 - 102016712 AGCD01019702 MODEL 8911319 protein-coding Itga3 integrin subunit alpha 3 ENCODES a protein that exhibits collagen binding (ortholog); fibronectin binding (ortholog); integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); dendritic spine maintenance (ortholog); exploration behavior (ortholog); PARTICIPATES IN altered Reelin signaling pathway; integrin mediated signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH bronchopulmonary dysplasia (ortholog); Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955451 11563120 11590119 - 102012721 AGCD01043359;AGCD01043360;GBBH01090713;GBCE01052146;XM_005394595;XM_013519106 XP_005394652;XP_013374560 MODEL 9032764 protein-coding Aire autoimmune regulator ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN central tolerance induction to self antigen (ortholog); humoral immune response (ortholog); negative thymic T cell selection (ortholog); ASSOCIATED WITH autoimmune polyendocrine syndrome (ortholog); autoimmune polyendocrine syndrome type 1 (ortholog); candidiasis (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955407 41157503 41165032 - 102028160 AGCD01007859;GBBH01221976;XM_013505365;XM_013505368;XM_013505371;XM_013505374;XM_013505376 XP_013360819;XP_013360822;XP_013360825;XP_013360828;XP_013360830 MODEL 8938063 protein-coding Txlng taxilin gamma ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN regulation of bone mineralization (ortholog); regulation of cell cycle (ortholog); regulation of cell cycle process (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog) NW_004955519 1484782 1536278 - 102007266 AGCD01067894;AGCD01067895;AGCD01067896;AGCD01067897;GBDK01432088;XM_005409145;XM_005409146;XM_013506995 XP_005409202;XP_005409203;XP_013362449 MODEL 9019535 protein-coding Ntn5 netrin 5 INVOLVED IN neurogenesis (ortholog) NW_004955559 1892982 1901759 + 102021055 AGCD01073678;AGCD01073679;AGCD01073680;GBBH01020916;GBBH01098419;XM_013508995 XP_013364449 MODEL 9034602 protein-coding Tspyl4 TSPY like 4 ASSOCIATED WITH melanoma (ortholog) NW_004955526 562891 567892 + 102011580 AGCD01069241;AGCD01069242;GBBH01061852;GBCB01020779;XM_005409782 XP_005409839 MODEL 8982300 protein-coding LOC102007220 olfactory receptor 52H1-like NW_004955414 21459569 21460513 - 102007220 AGCD01015420;XM_005380497 XP_005380554 MODEL 8722473 protein-coding LOC102004742 olfactory receptor 5D18-like NW_004955511 617821 618762 + 102004742 AGCD01066336;XM_005408202 XP_005408259 MODEL 8948869 protein-coding Pm20d2 peptidase M20 domain containing 2 ENCODES a protein that exhibits dipeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN proteolysis (ortholog); regulation of protein metabolic process (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955411 15932367 15943946 + 102017434 AGCD01011962;GBCQ01101234;GBDI01384473;XM_013510884 XP_013366338 MODEL 9045916 protein-coding Bcl7a BAF chromatin remodeling complex subunit BCL7A INVOLVED IN cellular respiration (ortholog); cognition (ortholog); energy homeostasis (ortholog); FOUND IN SWI/SNF complex (ortholog) NW_004955482 6473535 6491398 - 102009180 AGCD01057398;GBBH01077232;GBDJ01230097;XM_005403103 XP_005403160 MODEL 8793106 protein-coding Adgrf5 adhesion G protein-coupled receptor F5 INVOLVED IN energy reserve metabolic process (ortholog); erythrocyte development (ortholog); fat cell differentiation (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955437 11639555 11710362 - 102009876 AGCD01034580;GBBH01164762;XM_005389870;XM_005389871;XM_005389872;XM_005389873;XM_005389874 XP_005389927;XP_005389928;XP_005389929;XP_005389930;XP_005389931 MODEL 8804150 protein-coding Nphp1 nephrocystin 1 INVOLVED IN intracellular protein localization (ortholog); photoreceptor cell outer segment organization (ortholog); positive regulation of bicellular tight junction assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); CAKUT (ortholog); FOUND IN cell-cell junction (ortholog); ciliary base (ortholog); ciliary transition zone (ortholog) NW_004955470 3261455 3305989 + 102008524 AGCD01052695;AGCD01052696;AGCD01052697;GBCE01024891;XM_005400633;XM_005400634;XM_013522831 XP_005400690;XP_005400691;XP_013378285 MODEL 9012383 protein-coding Hoxd13 homeobox D13 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branch elongation of an epithelium (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH anemia (ortholog); Anorectal Malformations (ortholog); brachydactyly (ortholog); FOUND IN nucleus (ortholog) NW_004955403 20568314 20575579 - 102005880 AGCD01002166;AGCD01002167;XM_013514802 XP_013370256 MODEL 8729272 protein-coding LOC102022627 olfactory receptor 4A16-like NW_004955511 139532 140458 + 102022627 AGCD01066321;XM_005408178 XP_005408235 MODEL 8831066 protein-coding Atl3 atlastin GTPase 3 ENCODES a protein that exhibits GTPase-dependent fusogenic activity (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease axonal type 2N (ortholog); genetic disease (ortholog); hereditary sensory neuropathy type 1F (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) NW_004955422 21359152 21406151 + 102030206 AGCD01023116;GBDF01081785;XM_005384671;XM_005384672 XP_005384728;XP_005384729 MODEL 9043153 protein-coding Gpr176 G protein-coupled receptor 176 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); circadian behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955416 6735790 6879078 - 102013080 AGCD01016952;AGCD01016953;AGCD01016954;AGCD01016955;AGCD01016956;GBDJ01389643;XM_005381210 XP_005381267 MODEL 9053667 protein-coding Plppr5 phospholipid phosphatase related 5 INVOLVED IN positive regulation of filopodium assembly (ortholog); positive regulation of neuron projection development (ortholog); FOUND IN plasma membrane (ortholog) NW_004955435 3700217 3818532 - 102020949 AGCD01032802;AGCD01032803;AGCD01032804;AGCD01032805;GBDF01209569;GBDJ01158982;XM_013516396 XP_013371850 MODEL 8951026 protein-coding Fbrsl1 fibrosin like 1 ASSOCIATED WITH atrial fibrillation (ortholog); Familial Prostate Cancer (ortholog); Neurodevelopmental Disorders (ortholog) NW_004955482 442043 501579 - 102022293 AGCD01057173;AGCD01057174;AGCD01057175;GBDF01158803;GBDK01181027;XM_013503695;XM_013503696;XM_013503697;XM_013503698;XM_013503699;XM_013503700 XP_013359149;XP_013359150;XP_013359151;XP_013359152;XP_013359153;XP_013359154 MODEL 39132257 snrna U6 U6 spliceosomal RNA 39131475 protein-coding C3orf85 chromosome 3 open reading frame 85 8827192 protein-coding Trem2 triggering receptor expressed on myeloid cells 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein A-I binding (ortholog); apolipoprotein binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); apoptotic cell clearance (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 17 (ortholog); dementia (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); plasma membrane raft (ortholog) NW_004955437 7780886 7785597 - 102009649 AGCD01034467;GBCE01052348;XM_005389679 XP_005389736 MODEL 8712078 protein-coding Ccm2 CCM2 scaffold protein INVOLVED IN blood vessel development (ortholog); blood vessel endothelial cell differentiation (ortholog); cell-cell junction organization (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH cavernous hemangioma (ortholog); Central Nervous System Vascular Malformations (ortholog); cerebral cavernous malformation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955456 7232224 7251012 - 102015078 AGCD01046401;GBDJ01137048;GBDJ01137052;XM_013520603 XP_013376057 MODEL 8920953 protein-coding Eef2 eukaryotic translation elongation factor 2 ENCODES a protein that exhibits 5S rRNA binding (ortholog); actin filament binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); glial cell proliferation (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; translation elongation pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); brain glioblastoma multiforme (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955495 4800103 4807714 + 102015327 AGCD01061951;GBDF01004729;XM_005405819 XP_005405876 MODEL 9061414 protein-coding Exoc3l2 exocyst complex component 3 like 2 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH BRAIN MALFORMATION RENAL SYNDROME (ortholog); Meckel syndrome (ortholog) NW_004955555 2260885 2281784 - 102007818 AGCD01073142;AGCD01073143;GBCE01100000;GBCQ01063072;XM_005412504 XP_005412561 MODEL 41410899 mirna MIR653 microRNA 653 8915002 pseudo LOC102016713 28S ribosomal protein S36, mitochondrial pseudogene NW_004955484 1879480 1879862 - 102016713 AGCD01058070 MODEL 8704337 protein-coding Gipc2 GIPC PDZ domain containing family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytosol (ortholog) NW_004955423 15113049 15183211 - 102011331 AGCD01023794;AGCD01023795;AGCD01023796;GBDF01156626;XM_013514544;XM_013514545;XM_013514546;XM_013514547;XR_001234123 XP_013369998;XP_013369999;XP_013370000;XP_013370001 MODEL 8760289 protein-coding Pet100 PET100 homolog ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 12 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955563 1628746 1630307 - 102029237 AGCD01074153;GBDF01043194;XM_005413177 XP_005413234 MODEL 10079556 ncrna LOC106147184 uncharacterized LOC106147184 NW_004955524 2942027 2943839 - 106147184 AGCD01068845;XR_001231958 MODEL 9024498 protein-coding Ptprt protein tyrosine phosphatase receptor type T ENCODES a protein that exhibits alpha-actinin binding (ortholog); alpha-catenin binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to interleukin-6 (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); colon cancer (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955445 14185751 14961000 + 102026919 AGCD01039812;AGCD01039813;AGCD01039814;AGCD01039815;AGCD01039816;AGCD01039817;AGCD01039818;AGCD01039819;AGCD01039820;AGCD01039821;AGCD01039822;AGCD01039823;AGCD01039824;AGCD01039825;AGCD01039826;AGCD01039827;AGCD01039828;GBCE01157673;XM_005392501;XM_013518366 XP_005392558;XP_013373820 MODEL 8729091 pseudo LOC102018271 60S ribosomal protein L9-like NW_004955412 17709908 17710500 + 102018271 AGCD01012916 MODEL 8921820 protein-coding Odad2 outer dynein arm docking complex subunit 2 INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); male infertility (ortholog); FOUND IN axoneme (ortholog); ciliary base (ortholog) NW_004955462 1709493 1885094 - 102014021 AGCD01049132;AGCD01049133;AGCD01049134;AGCD01049135;AGCD01049136;GBDI01323768;XM_005398105;XM_013521477;XM_013521478;XM_013521479;XM_013521480;XM_013521481;XM_013521482 XP_005398162;XP_013376931;XP_013376932;XP_013376933;XP_013376934;XP_013376935;XP_013376936 MODEL 8768577 protein-coding LOC102018712 olfactory receptor 51F2 NW_004955414 20398735 20399715 + 102018712 AGCD01015371;XM_005380056 XP_005380113 MODEL 39133407 snrna U4 U4 spliceosomal RNA 8765089 protein-coding Rhex regulator of hemoglobinization and erythroid cell expansion ENCODES a protein that exhibits erythropoietin receptor binding (ortholog); INVOLVED IN cellular response to erythropoietin (ortholog); erythropoietin-mediated signaling pathway (ortholog); positive regulation of erythrocyte differentiation (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 41687577 41703282 + 102016446 AGCD01006688;GBDK01309194;XM_005375383;XM_005375384;XM_013523064 XP_005375440;XP_005375441;XP_013378518 MODEL 9001641 protein-coding Pick1 protein interacting with PRKCA 1 ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to decreased oxygen levels (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH amphetamine abuse (ortholog); substance-induced psychosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955413 24383130 24399092 + 102014342 AGCD01014363;AGCD01014364;GBDI01135012;XM_005379238;XM_005379240 XP_005379295;XP_005379297 MODEL 8722127 protein-coding Proca1 protein interacting with cyclin A1 ENCODES a protein that exhibits cyclin binding (ortholog) NW_004955481 4451649 4461296 + 102024675 AGCD01056941;AGCD01056942;GBBH01155525;XM_005402725;XM_005402726;XM_005402728;XM_005402729;XM_005402730;XM_005402731;XM_005402733;XM_005402736;XM_005402737;XM_013503392;XM_013503393;XM_013503394;XM_013503395;XM_013503396;XM_013503397;XM_013503398 XP_005402782;XP_005402783;XP_005402785;XP_005402786;XP_005402787;XP_005402788;XP_005402790;XP_005402793;XP_005402794;XP_013358846;XP_013358847;XP_013358848;XP_013358849;XP_013358850;XP_013358851;XP_013358852 MODEL 8904082 protein-coding Gpr179 G protein-coupled receptor 179 ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); response to light stimulus (ortholog); visual perception (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1B (ortholog); congenital stationary night blindness 1E (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); dendrite terminus (ortholog) NW_004955451 13545994 13560231 - 102017187 AGCD01043488;AGCD01043489;GBDF01207645;XM_005394606 XP_005394663 MODEL 9057686 pseudo LOC102004377 40S ribosomal protein S2-like NW_004955470 11454325 11473606 - 102004377 AGCD01052889 MODEL 8805472 protein-coding LOC102028868 uncharacterized LOC102028868 NW_004955491 4979280 4981120 - 102028868 AGCD01060466;GBDF01075831;XM_005404892 XP_005404949 MODEL 8720790 protein-coding Nckipsd NCK interacting protein with SH3 domain INVOLVED IN positive regulation of neuron projection development (ortholog); regulation of postsynapse assembly (ortholog); FOUND IN COP9 signalosome (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955532 755997 766202 - 102030664 AGCD01070151;AGCD01070152;GBDI01323136;XM_005410166;XM_013507637;XM_013507638 XP_005410223;XP_013363091;XP_013363092 MODEL 8906253 protein-coding Azgp1 alpha-2-glycoprotein 1, zinc-binding INVOLVED IN cell adhesion (ortholog); cellular response to insulin stimulus (ortholog); cellular response to magnesium ion (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Cachexia (ortholog); FOUND IN extracellular space (ortholog) NW_004955573 902153 910481 - 102005193 AGCD01075007;GBCQ01093722;XM_005413762;XM_013509496 XP_005413819;XP_013364950 MODEL 8893417 protein-coding Cd93 CD93 molecule ENCODES a protein that exhibits complement component C1q complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH thyroid gland carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955415 30244231 30255184 - 102029615 AGCD01016660;GBCQ01091933;XM_005380960;XR_260326 XP_005381017 MODEL 9049336 protein-coding LOC102020128 histone-lysine N-methyltransferase SETMAR ENCODES a protein that exhibits DNA binding (ortholog); DNA topoisomerase binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA catabolic process (ortholog); DNA double-strand break processing (ortholog); FOUND IN condensed chromosome (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955421 9066906 9080352 - 102020128 AGCD01021832;AGCD01021833;GBDF01208977;XM_005383745 XP_005383802 MODEL 9058148 protein-coding Myo5c myosin VC ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955409 2543520 2612867 + 102022170 AGCD01009201;AGCD01009202;AGCD01009203;AGCD01009204;AGCD01009205;AGCD01009206;GBBH01115679;XM_013510284 XP_013365738 MODEL 8972647 protein-coding Sctr secretin receptor ENCODES a protein that exhibits peptide binding (ortholog); peptide hormone binding (ortholog); secretin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); diet induced thermogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN cytoplasmic microtubule (ortholog) NW_004955459 10192449 10270483 + 102020770 AGCD01048181;AGCD01048182;AGCD01048183;AGCD01048184;GBDF01222090;XM_005397666;XM_005397668;XM_005397669;XM_005397670;XM_005397671;XM_013521062;XM_013521063 XP_005397723;XP_005397725;XP_005397726;XP_005397727;XP_005397728;XP_013376516;XP_013376517 MODEL 10200109 ncrna LOC106150155 uncharacterized LOC106150155 NW_004955466 1727792 1773796 + 106150155 AGCD01050717;GBCB01130127;XR_001236795 MODEL 9051546 protein-coding Dock5 dedicator of cytokinesis 5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN bone remodeling (ortholog); negative regulation of vascular associated smooth muscle contraction (ortholog); podosome assembly (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955403 48146616 48338218 + 102022661 AGCD01002915;AGCD01002916;AGCD01002917;GBDF01001559;XM_005373711;XM_013514062;XM_013514065;XM_013514069 XP_005373768;XP_013369516;XP_013369519;XP_013369523 MODEL 8972946 protein-coding Fndc4 fibronectin type III domain containing 4 INVOLVED IN negative regulation of inflammatory response (ortholog); response to transforming growth factor beta (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); plasma membrane (ortholog) NW_004955469 9456964 9459721 - 102006566 AGCD01052503;GBCB01056372;GBDJ01318705;XM_005400508 XP_005400565 MODEL 8877419 protein-coding Chrna10 cholinergic receptor nicotinic alpha 10 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; FOUND IN acetylcholine-gated channel complex (ortholog); axon (ortholog); cholinergic synapse (ortholog) NW_004955414 19487840 19495368 - 102018918 AGCD01015320;AGCD01015321;GBBH01148635;XM_005380457 XP_005380514 MODEL 8741204 protein-coding Synpr synaptoporin INVOLVED IN modulation of chemical synaptic transmission (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); synaptic vesicle membrane (ortholog) NW_004955517 2261080 2442271 - 102024268 AGCD01067623;AGCD01067624;AGCD01067625;AGCD01067626;AGCD01067627;AGCD01067628;AGCD01067629;AGCD01067630;GBBH01030467;XM_005409042 XP_005409099 MODEL 8874034 ncrna LOC102024333 uncharacterized LOC102024333 NW_004955417 10478200 10486529 + 102024333 AGCD01018071;GBDK01414540;XR_001233463;XR_001233464 MODEL 8915865 protein-coding Hinfp histone H4 transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell cycle G1/S phase transition (ortholog); DNA damage checkpoint signaling (ortholog); DNA repair (ortholog); FOUND IN Cajal body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955412 20236607 20247288 + 102027394 AGCD01012999;AGCD01013000;GBCE01130138;XM_005378307;XM_005378309;XM_005378310;XM_013511078;XM_013511079 XP_005378364;XP_005378366;XP_005378367;XP_013366532;XP_013366533 MODEL 8829762 protein-coding Plrg1 pleiotropic regulator 1 INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); protein localization to nucleus (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); DNA replication factor A complex (ortholog); fibrillar center (ortholog) NW_004955471 8764465 8777396 - 102007988 AGCD01053193;AGCD01053194;GBDJ01085184;XM_005400930 XP_005400987 MODEL 39132258 snrna U6 U6 spliceosomal RNA 8745526 ncrna LOC102010234 uncharacterized LOC102010234 NW_004955463 10201295 10205872 - 102010234 AGCD01049806;GBDF01116012;XR_263170 MODEL 8922059 protein-coding Itga4 integrin subunit alpha 4 ENCODES a protein that exhibits antigen binding (ortholog); C-X3-C chemokine binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN axonogenesis involved in innervation (ortholog); blood vessel remodeling (ortholog); cell adhesion (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); external side of plasma membrane (ortholog) NW_004955403 15726296 15807055 - 102030375 AGCD01002052;AGCD01002053;GBBH01091713;GBDK01233487;XM_013512527 XP_013367981 MODEL 8710848 protein-coding C4bpa complement component 4 binding protein alpha INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Radiation Pneumonitis (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal vesicle (ortholog); cell body (ortholog) NW_004955406 42613659 42641918 + 102028495 AGCD01006712;AGCD01006713;GBDI01193239;XM_005375423;XM_013502872;XM_013502874 XP_005375480;XP_013358326;XP_013358328 MODEL 8768257 protein-coding Ccm2l CCM2 like scaffold protein INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac muscle tissue growth (ortholog); negative regulation of homotypic cell-cell adhesion (ortholog) NW_004955422 28989242 29005827 - 102005724 AGCD01023376;AGCD01023377;GBBH01106937;GBCE01049493;XM_013514318 XP_013369772 MODEL 9045862 pseudo LOC102007222 protein SPT2 homolog pseudogene NW_004955474 802672 804690 - 102007222 AGCD01054229 MODEL 8762306 protein-coding Txn2 thioredoxin 2 ENCODES a protein that exhibits oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (ortholog); peptide-methionine (R)-S-oxide reductase activity (ortholog); peptide-methionine (S)-S-oxide reductase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); response to axon injury (ortholog); response to glucose (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 29 (ortholog); Experimental Diabetes Mellitus (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN dendrite (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955413 23044866 23056017 - 102019493 AGCD01014325;GBDF01052906;XM_005379160;XM_005379161 XP_005379217;XP_005379218 MODEL 8977400 pseudo LOC102004744 UMP-CMP kinase pseudogene NW_004955515 4019058 4025494 - 102004744 AGCD01067313 MODEL 41410902 mirna MIR654 microRNA 654 8917533 protein-coding Ntng1 netrin G1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cell-cell adhesion mediator activity (ortholog); INVOLVED IN axonogenesis (ortholog); modulation of chemical synaptic transmission (ortholog); regulation of neuron migration (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Colorectal Neoplasms (ortholog); schizophrenia (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); presynaptic active zone membrane (ortholog) NW_004955435 10923557 11247091 + 102015759 AGCD01033104;AGCD01033105;AGCD01033106;AGCD01033107;AGCD01033108;AGCD01033109;AGCD01033110;AGCD01033111;AGCD01033112;GBCQ01103167;XM_005388820;XM_005388823;XM_005388824;XM_005388825 XP_005388877;XP_005388880;XP_005388881;XP_005388882 MODEL 8785792 protein-coding Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 INVOLVED IN apoptotic process (ortholog); cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); COVID-19 (ortholog); substance-related disorder (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955402 44005517 44010722 + 102015363 AGCD01001085;GBDJ01234034;XM_005373005;XM_005373006 XP_005373062;XP_005373063 MODEL 9037593 protein-coding Pou4f2 POU class 4 homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonogenesis (ortholog); PARTICIPATES IN p53 signaling pathway; FOUND IN cytoplasm (ortholog); euchromatin (ortholog); nuclear speck (ortholog) NW_004955428 2325775 2329122 + 102010927 AGCD01027632;XM_005386664 XP_005386721 MODEL 8991108 protein-coding Nphp3 nephrocystin 3 INVOLVED IN atrial septum development (ortholog); cilium assembly (ortholog); convergent extension involved in gastrulation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); FOUND IN ciliary base (ortholog); ciliary inversin compartment (ortholog); ciliary tip (ortholog) NW_004955501 5799879 5837022 + 102019824 AGCD01064169;AGCD01064170;GBCE01105000;GBCE01105007;XM_013505800 XP_013361254 MODEL 9016192 protein-coding Cd96 CD96 molecule INVOLVED IN cell-matrix adhesion (ortholog); negative regulation of natural killer cell cytokine production (ortholog); negative regulation of type II interferon production (ortholog); ASSOCIATED WITH C syndrome (ortholog); multiple sclerosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955427 11971051 12057185 + 102019717 AGCD01027198;AGCD01027199;AGCD01027200;AGCD01027201;GBDI01278939;XM_005386365;XM_005386367;XM_013515037;XR_261254 XP_005386422;XP_005386424;XP_013370491 MODEL 8708960 protein-coding Atm ATM serine/threonine kinase ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); DNA-dependent protein kinase activity (ortholog); histone H2AXS139 kinase activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to gamma radiation (ortholog); cellular response to ionizing radiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; nuclear factor kappa B signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955412 10422753 10531406 + 102005238 AGCD01012767;AGCD01012768;AGCD01012769;GBDF01279272;XM_005378035;XM_013510995;XM_013510996;XR_001232882 XP_005378092;XP_013366449;XP_013366450 MODEL 8808089 protein-coding Wnk2 WNK lysine deficient protein kinase 2 INVOLVED IN monoatomic ion homeostasis (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH genetic disease (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog) NW_004955515 4730647 4852920 - 102010615 AGCD01067330;AGCD01067331;GBCB01002306;GBDK01219428;XM_013506886 XP_013362340 MODEL 8835927 protein-coding Gipc3 GIPC PDZ domain containing family member 3 ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 15 (ortholog); genetic disease (ortholog) NW_004955495 5531374 5536691 + 102003253 AGCD01062010;AGCD01062011;GBBH01075042;GBDK01319308;XM_013505214 XP_013360668 MODEL 8734776 protein-coding Tmem88 transmembrane protein 88 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein stabilization (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955467 9083623 9084834 - 102030511 AGCD01051483;GBDI01224232;XM_005399454 XP_005399511 MODEL 8952691 protein-coding Tle7 TLE family member 7 NW_004955484 4138324 4150092 - 102009184 AGCD01058202;AGCD01058203;GBDF01074192;GBDJ01410386;NM_001370855;XM_013503981 NP_001357784;XP_013359435 VALIDATED 8941118 protein-coding Fbxl12 F-box and leucine rich repeat protein 12 INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); ubiquitin ligase complex (ortholog) NW_004955495 1232028 1242673 - 102024924 AGCD01061677;GBCQ01139606;XM_005405573;XM_013505083 XP_005405630;XP_013360537 MODEL 8712714 protein-coding Scube1 signal peptide, CUB domain and EGF like domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) NW_004955413 28339212 28461626 - 102013711 AGCD01014556;AGCD01014557;GBDF01285768;XM_005379668 XP_005379725 MODEL 8814861 pseudo LOC102004378 transaldolase pseudogene NW_004955414 21830353 21833227 + 102004378 AGCD01015433 MODEL 8788464 protein-coding Airim AFG2 interacting ribosome maturation factor INVOLVED IN DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ribosomal large subunit biogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955452 15477253 15486400 - 102013140 AGCD01044486;GBDF01001402;XM_013519696;XM_013519697;XM_013519698 XP_013375150;XP_013375151;XP_013375152 MODEL 9050268 protein-coding Bpifb2 BPI fold containing family B member 2 NW_004955422 28233236 28251627 - 102004722 AGCD01023345;GBBH01228047;XM_005384855;XM_013513871;XM_013513872;XM_013513873;XM_013513874 XP_005384912;XP_013369325;XP_013369326;XP_013369327;XP_013369328 MODEL 8823883 protein-coding Exoc3l4 exocyst complex component 3 like 4 NW_004955538 2140599 2155781 + 102006709 AGCD01071101;AGCD01071102;GBDI01338301;XM_005410766;XM_005410767;XM_005410768;XM_005410769;XM_005410770;XM_005410771 XP_005410823;XP_005410824;XP_005410825;XP_005410826;XP_005410827;XP_005410828 MODEL 8847357 protein-coding Eef2k eukaryotic elongation factor 2 kinase ENCODES a protein that exhibits calmodulin binding (ortholog); elongation factor-2 kinase activity (ortholog); INVOLVED IN cellular response to anoxia (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); lung adenocarcinoma (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955493 865830 922765 + 102014911 AGCD01060868;AGCD01060869;AGCD01060870;AGCD01060871;GBDJ01005099;XM_005405078;XM_005405079;XM_005405080;XM_005405081;XM_005405083;XM_013504852 XP_005405135;XP_005405136;XP_005405137;XP_005405138;XP_005405140;XP_013360306 MODEL 8911755 protein-coding Adgrg1 adhesion G protein-coupled receptor G1 ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); brain development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH bilateral frontoparietal polymicrogyria (ortholog); complex cortical dysplasia with other brain malformations 14B (ortholog); Familial Prostate Cancer (ortholog); FOUND IN glial limiting end-foot (ortholog); plasma membrane (ortholog) NW_004955433 15253196 15288982 + 102030658 AGCD01031751;GBCQ01011245;XM_005388402;XM_013516235;XM_013516236;XM_013516237;XM_013516238;XM_013516239 XP_005388459;XP_013371689;XP_013371690;XP_013371691;XP_013371692;XP_013371693 MODEL 8718496 protein-coding Hoxd3 homeobox D3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cartilage development (ortholog); cell-matrix adhesion (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955403 20489663 20496021 - 102010855 AGCD01002160;XM_005373413;XR_001233436;XR_259190 XP_005373470 MODEL 8950296 protein-coding LOC102022630 E3 ubiquitin-protein ligase MARCH3-like NW_004955521 4635334 4642559 - 102022630 AGCD01068273;GBCE01134139;XM_013507094 XP_013362548 MODEL 10182130 protein-coding LOC106147185 translation initiation factor IF-2-like NW_004955524 1464405 1464488 + 106147185 AGCD01068753;GBCQ01009310;XM_013507325 XP_013362779 MODEL 8963166 pseudo LOC102004747 40S ribosomal protein SA pseudogene NW_004955526 2686932 2687895 - 102004747 AGCD01069310 MODEL 8993613 protein-coding LOC102018714 serine/threonine-protein kinase 33-like NW_004955414 24256281 24303682 - 102018714 AGCD01015539;AGCD01015540;AGCD01015541;GBDI01261988;XM_013511741 XP_013367195 MODEL 9020831 protein-coding Dock6 dedicator of cytokinesis 6 ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 2 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) NW_004955495 2174802 2216424 - 102017136 AGCD01061750;AGCD01061751;AGCD01061752;AGCD01061753;GBCB01088964;GBDK01019649;XM_013505181;XM_013505182 XP_013360635;XP_013360636 MODEL 8875990 protein-coding Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); DNA damage checkpoint signaling (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955429 18408121 18415832 + 102024260 AGCD01028902;AGCD01028903;GBDF01047104;XM_005387125;XM_005387126;XM_005387127;XM_005387128;XM_013515475;XR_001234519;XR_001234520 XP_005387182;XP_005387183;XP_005387184;XP_005387185;XP_013370929 MODEL 8945064 protein-coding Chrna2 cholinergic receptor nicotinic alpha 2 subunit ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cellular response to nicotine (ortholog); cerebral cortex GABAergic interneuron development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH asthma (ortholog); autosomal dominant nocturnal frontal lobe epilepsy (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 4 (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell periphery (ortholog); neuron projection cytoplasm (ortholog) NW_004955403 49970398 49989095 - 102005096 AGCD01002953;XM_013514203 XP_013369657 MODEL 9012778 protein-coding Synrg synergin gamma ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN clathrin coat of trans-Golgi network vesicle (ortholog) NW_004955451 439205 510675 + 102020866 AGCD01042936;GBDF01004942;GBDF01016714;XM_005393912;XM_005393914;XM_005393915;XM_005393917;XM_005393919;XM_005393920;XM_005393921;XM_005393922;XM_013519166;XM_013519167;XM_013519168 XP_005393969;XP_005393971;XP_005393972;XP_005393974;XP_005393976;XP_005393977;XP_005393978;XP_005393979;XP_013374620;XP_013374621;XP_013374622 MODEL 8993443 protein-coding Treml1 triggering receptor expressed on myeloid cells like 1 INVOLVED IN calcium-mediated signaling (ortholog); platelet activation (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955437 7773279 7778197 - 102009104 AGCD01034467;GBDI01367631;XM_005389677;XM_005389678 XP_005389734;XP_005389735 MODEL 8974305 protein-coding Hint1 histidine triad nucleotide binding protein 1 ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); deSUMOylase activity (ortholog); hydrolase activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of calcium-mediated signaling (ortholog); protein desumoylation (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Charcot-Marie-Tooth disease (ortholog); Gamstorp-Wohlfart syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); histone deacetylase complex (ortholog) NW_004955408 2673950 2678528 - 102019364 AGCD01008023;GBCE01000968;XM_005376066 XP_005376123 MODEL 8790965 pseudo LOC102028870 uncharacterized protein C11orf57 pseudogene NW_004955422 26235914 26236773 - 102028870 AGCD01023283 MODEL 8909255 protein-coding Bcl7b BAF chromatin remodeling complex subunit BCL7B FOUND IN SWI/SNF complex (ortholog) NW_004955456 14149484 14166753 + 102027944 AGCD01046634;GBDK01074047;XM_005396784;XM_013520575;XR_262902 XP_005396841;XP_013376029 MODEL 8993131 protein-coding Tmem8b transmembrane protein 8B INVOLVED IN cell-matrix adhesion (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955472 467027 489287 - 102004470 AGCD01053339;GBDF01221769;XM_005400989;XM_005400990;XM_005400991;XM_005400992;XM_013523028;XM_013523030;XM_013523031 XP_005401046;XP_005401047;XP_005401048;XP_005401049;XP_013378482;XP_013378484;XP_013378485 MODEL 39132648 snrna U6 U6 spliceosomal RNA 8920635 protein-coding Ncl nucleolin ENCODES a protein that exhibits calcium ion binding (ortholog); DNA topoisomerase binding (ortholog); ErbB-4 class receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autistic disorder (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); chromosome (ortholog) NW_004955453 4154627 4164253 + 102021084 AGCD01044681;AGCD01044682;GBDF01051740;XM_005395394;XM_013519931 XP_005395451;XP_013375385 MODEL 8737374 protein-coding LOC102016716 olfactory receptor 4B1-like NW_004955422 340029 340971 - 102016716 AGCD01022404;XM_005383951 XP_005384008 MODEL 8709568 protein-coding C4bpb complement component 4 binding protein beta INVOLVED IN negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); regulation of opsonization (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular space (ortholog) NW_004955406 42601164 42608912 + 102024876 AGCD01006712;GBDF01118429;XM_005375411 XP_005375468 MODEL 9027960 protein-coding Ptpru protein tyrosine phosphatase receptor type U ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); homotypic cell-cell adhesion (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Dwarfism (ortholog); Experimental Diabetes Mellitus (ortholog); hypertension (ortholog); FOUND IN cell-cell junction (ortholog) NW_004955452 8223773 8296769 + 102026069 AGCD01044212;AGCD01044213;AGCD01044214;GBDJ01076331;XM_005394989;XM_005394992;XM_005394993;XM_013519598;XM_013519599;XM_013519600 XP_005395046;XP_005395049;XP_005395050;XP_013375052;XP_013375053;XP_013375054 MODEL 151707873 mirna MIR665 microRNA 665 10089250 protein-coding LOC106150156 uncharacterized LOC106150156 NW_004955466 1523167 1538670 - 106150156 AGCD01050710;AGCD01050711;GBCE01153039;GBDK01229592;XM_013521922 XP_013377376 MODEL 8993017 protein-coding Pmch pro-melanin concentrating hormone ENCODES a protein that exhibits type 1 melanin-concentrating hormone receptor binding (ortholog); INVOLVED IN drinking behavior (ortholog); feeding behavior (ortholog); lactation (ortholog); ASSOCIATED WITH Insulin Resistance (ortholog); obesity (ortholog); sleeping sickness (ortholog); FOUND IN extracellular space (ortholog); nucleus (ortholog) NW_004955405 37357468 37360695 - 102029697 AGCD01005452;GBBH01147925;XM_005374562 XP_005374619 MODEL 8975191 protein-coding Fndc5 fibronectin type III domain containing 5 INVOLVED IN positive regulation of brown fat cell differentiation (ortholog); response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955452 11120823 11127010 - 102030147 AGCD01044327;GBDJ01261961;XM_005395095;XM_005395096 XP_005395152;XP_005395153 MODEL 39133408 snrna U4 U4 spliceosomal RNA 9023107 protein-coding Odad3 outer dynein arm docking complex subunit 3 INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); outer dynein arm assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); ciliary basal body (ortholog) NW_004955495 2318840 2330966 - 102024250 AGCD01061766;AGCD01061767;XM_005405666;XM_013505111 XP_005405723;XP_013360565 MODEL 8976729 protein-coding Pid1 phosphotyrosine interaction domain containing 1 INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to fatty acid (ortholog); cellular response to interleukin-6 (ortholog); ASSOCIATED WITH asthma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog) NW_004955453 5680418 5913236 + 102005004 AGCD01044712;AGCD01044713;AGCD01044714;GBDJ01190629;XM_013519988 XP_013375442 MODEL 8820750 protein-coding Pard6b par-6 family cell polarity regulator beta INVOLVED IN protein-containing complex assembly (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955445 7625303 7638652 - 102026367 AGCD01039547;GBCQ01040751;GBCQ01040752;XM_013518368 XP_013373822 MODEL 8838886 protein-coding LOC102007223 cystatin-C-like NW_004955415 30634590 30646109 + 102007223 AGCD01016666;GBDI01294913;XM_005380976;XM_013512135 XP_005381033;XP_013367589 MODEL 8877243 protein-coding Pet117 PET117 homolog ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 19 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955415 26868442 26871832 + 102013929 AGCD01016610;GBDF01144428;XM_005380920 XP_005380977 MODEL 8790733 protein-coding LOC102018274 Wilms tumor protein 1-interacting protein-like NW_004955466 5534404 5550454 - 102018274 AGCD01050882;GBDF01040845;XM_013521879 XP_013377333 MODEL 8935516 protein-coding LOC102028871 zinc finger protein 709-like NW_004955495 2451976 2461016 - 102028871 AGCD01061776;GBCE01185389;XM_005405680 XP_005405737 MODEL 8889311 protein-coding Ccn1 cellular communication network factor 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process involved in heart morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrioventricular valve morphogenesis (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Heart Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955423 8416498 8419029 - 102024022 AGCD01023629;GBBH01030882;XM_005385136 XP_005385193 MODEL 8891127 protein-coding Txndc11 thioredoxin domain containing 11 FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955442 6887538 6959324 + 102004525 AGCD01037603;AGCD01037604;AGCD01037605;AGCD01037606;AGCD01037607;AGCD01037608;GBBH01093706;GBCQ01140909;XM_013517809 XP_013373263 MODEL 8826450 protein-coding Exoc4 exocyst complex component 4 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); establishment of cell polarity (ortholog); Golgi to plasma membrane transport (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Colorectal Cancer 10 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cell leading edge (ortholog); centrosome (ortholog) NW_004955410 33937825 34672790 - 102005013 AGCD01011393;AGCD01011394;AGCD01011395;AGCD01011396;AGCD01011397;AGCD01011398;AGCD01011399;AGCD01011400;AGCD01011401;AGCD01011402;AGCD01011403;GBCE01044996;XM_005377540;XM_013510636 XP_005377597;XP_013366090 MODEL 8789005 protein-coding Myo6 myosin VI ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); cellular response to electrical stimulus (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; E-cadherin signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 22 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN actin filament (ortholog); apical part of cell (ortholog); axon (ortholog) NW_004955502 4219067 4356988 + 102003361 AGCD01064332;AGCD01064333;AGCD01064334;GBDI01215400;XM_005406898;XM_013505831;XM_013505832;XM_013505833;XM_013505834 XP_005406955;XP_013361285;XP_013361286;XP_013361287;XP_013361288 MODEL 8885973 pseudo LOC102022636 DET1- and DDB1-associated protein 1 pseudogene NW_004955441 730533 730837 + 102022636 AGCD01036732 MODEL 8755150 protein-coding LOC102024336 uncharacterized LOC102024336 NW_004955418 10489837 10598897 + 102024336 AGCD01018979;AGCD01018980;AGCD01018981;AGCD01018982;XM_005382184 XP_005382241 MODEL 10184170 ncrna LOC106147186 uncharacterized LOC106147186 NW_004955524 848638 852760 - 106147186 AGCD01068718;GBCE01081037;XR_001231959 MODEL 8876304 protein-coding Adgrg2 adhesion G protein-coupled receptor G2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); spermatid development (ortholog); ASSOCIATED WITH autosomal recessive congenital bilateral absence of vas deferens (ortholog); congenital bilateral absence of vas deferens (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955586 359573 477277 + 102006515 AGCD01076031;GBDK01234833;XM_005414435;XM_013509887;XM_013509888;XM_013509889;XM_013509890;XM_013509891;XM_013509892;XM_013509893 XP_005414492;XP_013365341;XP_013365342;XP_013365343;XP_013365344;XP_013365345;XP_013365346;XP_013365347 MODEL 9036868 protein-coding Atmin ATM interactor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); dynein complex binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN motile cilium assembly (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of gene expression (ortholog); FOUND IN nuclear body (ortholog) NW_004955522 3829875 3835449 + 102007267 AGCD01068399;AGCD01068400;GBCE01045514;GBDF01048467;XM_013507104;XM_013507105 XP_013362558;XP_013362559 MODEL 8987697 protein-coding Procr protein C receptor INVOLVED IN negative regulation of coagulation (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 1; protein C anticoagulant pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN centrosome (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955422 26215757 26220396 - 102014795 AGCD01023281;AGCD01023282;GBBH01160494;GBDK01431932;XM_013514115 XP_013369569 MODEL 10211067 ncrna LOC106150157 uncharacterized LOC106150157 NW_004955466 3279395 3291731 + 106150157 AGCD01050788;GBDF01048271;XR_001236802 MODEL 9008992 protein-coding Ptprz1 protein tyrosine phosphatase receptor type Z1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); integrin binding (ortholog); phosphatase activity (ortholog); INVOLVED IN axonal fasciculation (ortholog); axonogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic spine (ortholog) NW_004955479 3611658 3734225 + 102021008 AGCD01056301;GBDI01323065;XM_013503257 XP_013358711 MODEL 9050485 protein-coding Gpr18 G protein-coupled receptor 18 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN CD8-positive, alpha-beta intraepithelial T cell differentiation (ortholog); CD8-positive, gamma-delta intraepithelial T cell differentiation (ortholog); negative regulation of leukocyte chemotaxis (ortholog) NW_004955404 11293897 11321072 + 102011942 AGCD01003417;AGCD01003418;GBDK01169466;XM_005374062;XM_005374063 XP_005374119;XP_005374120 MODEL 8777213 protein-coding Tlk1 tousled like kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular protein transport (ortholog); intracellular signal transduction (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Neoplasm Recurrence, Local (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955449 3694624 3840468 + 102022033 AGCD01041863;AGCD01041864;AGCD01041865;AGCD01041866;AGCD01041867;AGCD01041868;GBDK01190119;XM_005393240 XP_005393297 MODEL 39133410 snrna U4 U4 spliceosomal RNA 8813000 pseudo LOC102020129 THO complex subunit 7 homolog pseudogene NW_004955492 3881271 3882782 + 102020129 AGCD01060704 MODEL 8773330 protein-coding Scube2 signal peptide, CUB domain and EGF like domain containing 2 ENCODES a protein that exhibits hedgehog family protein binding (ortholog); INVOLVED IN chondrocyte differentiation involved in endochondral bone morphogenesis (ortholog); positive regulation of chondrocyte proliferation (ortholog); positive regulation of ossification (ortholog); FOUND IN extracellular space (ortholog) NW_004955414 24751134 24818338 - 102025996 AGCD01015553;AGCD01015554;AGCD01015555;AGCD01015556;GBBH01011763;GBDK01358943;XM_013511992 XP_013367446 MODEL 9050458 protein-coding LOC102010235 cytochrome P450 4X1 ENCODES a protein that exhibits anandamide 14,15 epoxidase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog) NW_004955464 11373217 11415433 - 102010235 AGCD01050149;AGCD01050150;AGCD01050151;AGCD01050152;AGCD01050153;GBDI01243736;XM_013521750;XM_013521751;XM_013521752;XR_001236710 XP_013377204;XP_013377205;XP_013377206 MODEL 8738277 protein-coding LOC102004387 C-C motif chemokine 8-like NW_004955481 9082226 9083739 + 102004387 AGCD01057094;GBBH01002161;XM_005402840 XP_005402897 MODEL 8950258 protein-coding Ajap1 adherens junctions associated protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); negative regulation of wound healing (ortholog); regulation of polarized epithelial cell differentiation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955486 7333663 7441686 - 102020570 AGCD01059129;AGCD01059130;AGCD01059131;GBCQ01143431;XM_005404124 XP_005404181 MODEL 8768375 protein-coding Syp synaptophysin ENCODES a protein that exhibits cholesterol binding (ortholog); identical protein binding (ortholog); protein carrier chaperone (ortholog); INVOLVED IN endocytosis (ortholog); modulation of chemical synaptic transmission (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH cochlear disease; alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN basal part of cell; vestibular calyx terminal; excitatory synapse (ortholog) NW_004955543 675294 689579 - 102010632 AGCD01071598;AGCD01071599;GBDJ01316040;XM_005411331 XP_005411388 MODEL 8732003 protein-coding Bpifb3 BPI fold containing family B member 3 FOUND IN cytoplasm (ortholog) NW_004955422 28192359 28208946 - 102003885 AGCD01023345;GBBH01229204;XM_005384853 XP_005384910 MODEL 10235799 protein-coding Ntng2 netrin G2 INVOLVED IN axonogenesis (ortholog); modulation of chemical synaptic transmission (ortholog); postsynaptic specialization assembly (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Developmental Disabilities (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955513 1654398 1701062 + 106147051 AGCD01066858;AGCD01066859;AGCD01066860;GBBH01055029;XM_013506741 XP_013362195 MODEL 8728640 protein-coding Eef2kmt eukaryotic elongation factor 2 lysine methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine trimethylation (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955442 12467077 12475902 + 102026804 AGCD01037736;GBBH01209835;XM_005391251 XP_005391308 MODEL 9054983 protein-coding Tmem9 transmembrane protein 9 INVOLVED IN endosomal lumen acidification (ortholog); lysosomal lumen acidification (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); FOUND IN late endosome (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955406 37279885 37299196 - 102010022 AGCD01006572;AGCD01006573;GBBH01033294;XM_005375161;XM_005375162 XP_005375218;XP_005375219 MODEL 9011686 protein-coding Hoxd4 homeobox D4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic organ development (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955403 20510364 20526564 - 102010326 AGCD01002160;AGCD01002161;GBCB01114081;GBDJ01422951;XM_005373411 XP_005373468 MODEL 9037830 protein-coding Wnk3 WNK lysine deficient protein kinase 3 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); maintenance of blood-brain barrier (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Neurodevelopmental Disorders (ortholog); Prieto syndrome (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955475 1441068 1641599 - 102020660 AGCD01054753;AGCD01054754;AGCD01054755;AGCD01054756;AGCD01054757;GBDF01016694;XM_013502857;XM_013502858;XM_013502859;XM_013502860;XM_013502861 XP_013358311;XP_013358312;XP_013358313;XP_013358314;XP_013358315 MODEL 9064580 protein-coding Nphp4 nephrocystin 4 INVOLVED IN flagellated sperm motility (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); Bardet-Biedl syndrome (ortholog); CAKUT (ortholog); FOUND IN cell-cell junction (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955486 6442058 6547451 + 102015638 AGCD01059119;AGCD01059120;GBDF01192861;XM_005404106;XM_005404107;XM_005404108;XM_005404109;XM_005404111;XM_005404112;XM_005404114;XM_005404116;XM_013504271;XM_013504272;XR_001231139;XR_263957 XP_005404163;XP_005404164;XP_005404165;XP_005404166;XP_005404168;XP_005404169;XP_005404171;XP_005404173;XP_013359725;XP_013359726 MODEL 8763736 protein-coding Gipr gastric inhibitory polypeptide receptor ENCODES a protein that exhibits gastric inhibitory peptide receptor activity (ortholog); glucagon family peptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); desensitization of G protein-coupled receptor signaling pathway (ortholog); endocrine pancreas development (ortholog); ASSOCIATED WITH Body Weight (ortholog); cardiovascular system disease (ortholog); diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955574 140307 153684 + 102015255 AGCD01075086;GBDK01050785;XM_013509505;XM_013509506;XM_013509507;XM_013509508;XM_013509509;XM_013509510;XM_013509511;XM_013509512;XR_001232446;XR_001232447 XP_013364959;XP_013364960;XP_013364961;XP_013364962;XP_013364963;XP_013364964;XP_013364965;XP_013364966 MODEL 8913414 protein-coding Pls1 plastin 1 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); intestinal D-glucose absorption (ortholog); microvillus assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 76 (ortholog); genetic disease (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); stereocilium (ortholog) NW_004955508 3215304 3324240 - 102012672 AGCD01065806;GBDI01000738;XM_005407737;XM_013506262 XP_005407794;XP_013361716 MODEL 8750703 protein-coding Azi2 5-azacytidine induced 2 INVOLVED IN dendritic cell differentiation (ortholog); dendritic cell proliferation (ortholog); mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog) NW_004955430 19802106 19829566 - 102019095 AGCD01029724;GBCQ01066750;GBDI01134580;XM_005387509;XM_005387510;XM_013515642 XP_005387566;XP_005387567;XP_013371096 MODEL 8710719 protein-coding Fndc7 fibronectin type III domain containing 7 NW_004955435 12185187 12213242 + 102020045 AGCD01033135;AGCD01033136;XM_005388833 XP_005388890 MODEL 8915263 protein-coding Arhgap19 Rho GTPase activating protein 19 ASSOCIATED WITH Charcot-Marie-Tooth disease, axonal, type 2KK (ortholog); FOUND IN plasma membrane (ortholog) NW_004955507 3400273 3471943 - 102003165 AGCD01065621;AGCD01065622;AGCD01065623;AGCD01065624;AGCD01065625;AGCD01065626;GBCQ01061658;GBDF01153442;XM_013506225 XP_013361679 MODEL 8963736 protein-coding Pmel premelanosome protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN eye development (ortholog); melanin biosynthetic process (ortholog); melanosome organization (ortholog); ASSOCIATED WITH coat/hair pigmentation trait (ortholog); melanoma (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955458 3544855 3555453 - 102025878 AGCD01047317;AGCD01047318;AGCD01047319;GBBH01103110;XM_005397275;XM_005397277;XM_005397278 XP_005397332;XP_005397334;XP_005397335 MODEL 9006139 protein-coding Itga5 integrin subunit alpha 5 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN CD40 signaling pathway (ortholog); cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN integrin mediated signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Gliosis (ortholog); Hyperalgesia (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); cytoplasmic vesicle (ortholog) NW_004955458 1635554 1657609 - 102007196 AGCD01047197;GBCB01098640;XM_005397224 XP_005397281 MODEL 8817295 protein-coding Pidd1 p53-induced death domain protein 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 75 (ortholog); developmental and epileptic encephalopathy 3 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955476 11325877 11331447 + 102009941 AGCD01055449;AGCD01055450;GBDK01398145;XM_013502998 XP_013358452 MODEL 8919698 protein-coding Chrna3 cholinergic receptor nicotinic alpha 3 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); activation of transmembrane receptor protein tyrosine kinase activity (ortholog); behavioral response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; nicotine pharmacodynamics pathway; nicotine pharmacokinetics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) NW_004955450 979630 1011316 - 102011926 AGCD01042346;AGCD01042347;AGCD01042348;AGCD01042349;GBBH01004760;XM_005393455 XP_005393512 MODEL 8989837 protein-coding Hint2 histidine triad nucleotide binding protein 2 ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); INVOLVED IN lipid catabolic process (ortholog); negative regulation of peptidyl-lysine acetylation (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955472 500845 503067 + 102005925 AGCD01053339;GBDF01119736;XM_005400995 XP_005401052 MODEL 8699845 protein-coding Prodh2 proline dehydrogenase 2 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-NH group of donors (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955468 2747870 2754621 + 102017216 AGCD01051834;AGCD01051835;GBCQ01009142;XM_005399947 XP_005400004 MODEL 8720553 ncrna LOC102016720 uncharacterized LOC102016720 NW_004955495 3352618 3356536 + 102016720 AGCD01061849;AGCD01061850;GBCQ01113516;XR_001231390;XR_001231391;XR_264142 MODEL 8949000 protein-coding Bcl7c BAF chromatin remodeling complex subunit BCL7C ASSOCIATED WITH Ependymomas (ortholog); FOUND IN SWI/SNF complex (ortholog) NW_004955493 7728229 7733086 - 102022395 AGCD01061222;GBCC01020237;XM_005405278 XP_005405335 MODEL 8907127 protein-coding Pou4f3 POU class 4 homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axon extension (ortholog); inner ear auditory receptor cell differentiation (ortholog); inner ear development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 15 (ortholog); Deafness (ortholog); Hearing Loss (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 7777296 7778622 - 102016049 AGCD01016056;XM_005380674 XP_005380731 MODEL 9057470 protein-coding Ncln nicalin ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein stabilization (ortholog); regulation of protein complex stability (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog); protein-containing complex (ortholog) NW_004955495 5222990 5238644 - 102024126 AGCD01061985;AGCD01061986;GBCB01024263;XM_005405846;XM_005405847 XP_005405903;XP_005405904 MODEL 8894546 pseudo LOC102007224 selenide, water dikinase 2-like NW_004955417 15154063 15155323 + 102007224 AGCD01018224 MODEL 8962794 pseudo LOC102018283 RNA-binding protein 34 pseudogene NW_004955475 9524183 9525658 + 102018283 AGCD01055068 MODEL 8798168 ncrna LOC102004751 uncharacterized LOC102004751 NW_004955437 17871916 17891241 + 102004751 AGCD01034762;GBCQ01090089;XR_001235033;XR_001235034;XR_001235035;XR_261887;XR_261889 MODEL 8940499 protein-coding Scube3 signal peptide, CUB domain and EGF like domain containing 3 ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of BMP signaling pathway (ortholog); positive regulation of osteoblast differentiation (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Dwarfism (ortholog); genetic disease (ortholog); prostate cancer (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955437 3178985 3213772 + 102022425 AGCD01034300;GBDI01201758;GBDJ01353348;XM_005389543;XM_005389544;XM_005389545 XP_005389600;XP_005389601;XP_005389602 MODEL 153211033 mirna MIR668 microRNA 668 8913595 pseudo LOC102018717 cullin-2 pseudogene NW_004955472 6363888 6365161 - 102018717 AGCD01053598 MODEL 9019253 protein-coding Ccn2 cellular communication network factor 2 ENCODES a protein that exhibits fibronectin binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN angiogenesis (ortholog); calcium ion transmembrane import into cytosol (ortholog); cartilage condensation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Aggressive Fibromatosis (ortholog); aortic valve insufficiency (ortholog); FOUND IN cell cortex (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955436 12523602 12526986 - 102003277 AGCD01033842;AGCD01033843;GBCE01002481;GBDJ01011208;XM_013516697 XP_013372151 MODEL 39131445 protein-coding NTNG2 netrin G2 9037898 ncrna LOC102024337 uncharacterized LOC102024337 NW_004955418 19468435 19511449 + 102024337 AGCD01019195;GBCQ01141644;XR_260572 MODEL 10119970 protein-coding LOC106147187 vomeronasal type-2 receptor 116-like NW_004955524 1583691 1876205 + 106147187 AGCD01068757;AGCD01068758;AGCD01068759;AGCD01068760;AGCD01068761;AGCD01068762;AGCD01068763;AGCD01068764;AGCD01068765;AGCD01068766;AGCD01068767;AGCD01068768;AGCD01068769;AGCD01068770;AGCD01068771;AGCD01068772;AGCD01068773;AGCD01068774;AGCD01068775;AGCD01068776;AGCD01068777;AGCD01068778;AGCD01068779;AGCD01068780;AGCD01068781;XM_013507341 XP_013362795 MODEL 9060707 protein-coding Odad4 outer dynein arm docking complex subunit 4 INVOLVED IN brain development (ortholog); cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 35 (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axoneme (ortholog) NW_004955451 16098495 16112985 + 102009005 AGCD01043654;GBDJ01018523;XM_005394425;XM_005394426 XP_005394482;XP_005394483 MODEL 8831386 protein-coding Rho rhodopsin ENCODES a protein that exhibits retinal binding (ortholog); spectrin binding (ortholog); INVOLVED IN absorption of visible light (ortholog); cellular response to light stimulus (ortholog); detection of light stimulus (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Coats disease (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 14 (ortholog); FOUND IN cell-cell junction (ortholog); Golgi apparatus (ortholog); photoreceptor disc membrane (ortholog) NW_004955429 17787337 17791982 - 102012673 AGCD01028867;GBBH01131777;XM_005387085 XP_005387142 MODEL 8911021 protein-coding Ptrh1 peptidyl-tRNA hydrolase 1 homolog ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955419 940508 942375 + 102028195 AGCD01019624;GBDI01009713;XM_005382417 XP_005382474 MODEL 39132650 snrna U6 U6 spliceosomal RNA 9060433 protein-coding Gpr180 G protein-coupled receptor 180 INVOLVED IN fat cell differentiation (ortholog); gene expression (ortholog); generation of precursor metabolites and energy (ortholog) NW_004955404 15250532 15275381 - 102027262 AGCD01003538;AGCD01003539;AGCD01003540;GBDK01027959;XM_005374110;XM_013516272 XP_005374167;XP_013371726 MODEL 8822320 protein-coding Pard6g par-6 family cell polarity regulator gamma PARTICIPATES IN protein kinase C (PKC) signaling pathway; FOUND IN protein-containing complex (ortholog) NW_004955402 63374837 63459327 - 102030141 AGCD01001670;AGCD01001671;GBDI01383965;XM_005373129;XM_005373130 XP_005373186;XP_005373187 MODEL 8770310 protein-coding Cd99 CD99 molecule (Xg blood group) INVOLVED IN homotypic cell-cell adhesion (ortholog); myeloid dendritic cell activation (ortholog); positive regulation of neutrophil extravasation (ortholog); ASSOCIATED WITH Ewing sarcoma (ortholog); mesenchymal chondrosarcoma (ortholog); FOUND IN cell surface (ortholog) NW_004955499 1607382 1646172 + 102010384 AGCD01063372;AGCD01063373;AGCD01063374;AGCD01063375;AGCD01063376;AGCD01063377;GBCB01022919;GBCB01022926;XM_013505598 XP_013361052 MODEL 8937492 protein-coding C5ar1 complement C5a receptor 1 ENCODES a protein that exhibits complement component C5a binding (ortholog); complement component C5a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955574 1221942 1229634 + 102008996 AGCD01075168;AGCD01075169;GBDK01317924;XM_005413864 XP_005413921 MODEL 8954932 protein-coding Ajm1 apical junction component 1 homolog ASSOCIATED WITH COVID-19 (ortholog) NW_004955513 4924344 4930850 + 102024602 AGCD01066943;GBCB01015030;XM_005408557;XM_005408558 XP_005408614;XP_005408615 MODEL 8736183 ncrna LOC102028872 uncharacterized LOC102028872 NW_004955495 3905711 3913792 + 102028872 AGCD01061887;GBDF01222743;XR_264147;XR_264148 MODEL 8719593 protein-coding Sypl1 synaptophysin like 1 ASSOCIATED WITH intellectual disability (ortholog); FOUND IN membrane (ortholog); secretory granule (ortholog); synaptic vesicle membrane (ortholog) NW_004955410 10571888 10590978 - 102027951 AGCD01010795;AGCD01010796;GBDF01047643;XM_005377266 XP_005377323 MODEL 8896741 protein-coding LOC102022638 olfactory receptor 4N4 NW_004955550 574663 575589 - 102022638 AGCD01072511;XM_005412134 XP_005412191 MODEL 10150034 ncrna LOC106150158 uncharacterized LOC106150158 NW_004955466 3550572 3585441 + 106150158 AGCD01050796;GBCQ01032464;XR_001236803 MODEL 9005533 protein-coding Myo7a myosin VIIA ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ADP binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); auditory receptor cell stereocilium organization (ortholog); cochlea development (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH Auditory Neuropathy (ortholog); autosomal dominant nonsyndromic deafness 11 (ortholog); autosomal dominant nonsyndromic deafness 80 (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 14576356 14647500 - 102011193 AGCD01015155;GBDK01219650;XM_013512088 XP_013367542 MODEL 8788880 protein-coding Wnk4 WNK lysine deficient protein kinase 4 ENCODES a protein that exhibits chloride ion binding (ortholog); ion channel inhibitor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); aldosterone secretion (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Gitelman syndrome (ortholog); hypertension (ortholog); FOUND IN bicellular tight junction (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955451 16593840 16606817 + 102028924 AGCD01043695;AGCD01043696;GBBH01026714;GBDF01163377;XM_013519256 XP_013374710 MODEL 9035917 pseudo LOC102004389 atlastin-2-like NW_004955482 7328108 7330635 + 102004389 AGCD01057455;AGCD01057456 MODEL 8946074 protein-coding Pls3 plastin 3 ENCODES a protein that exhibits structural constituent of presynaptic actin cytoskeleton (ortholog); INVOLVED IN bone development (ortholog); inner ear auditory receptor cell differentiation (ortholog); regulation of synaptic vesicle cycle (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Anterior Diaphragmatic Hernia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuromuscular junction (ortholog) NW_004955490 125913 221152 - 102024576 AGCD01060059;AGCD01060060;AGCD01060061;GBCE01031000;XM_005404619;XM_013504543 XP_005404676;XP_013359997 MODEL 8894513 protein-coding Tlk2 tousled like kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); chromosome segregation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 57 (ortholog); Developmental Disease (ortholog); FOUND IN intermediate filament (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955478 9100863 9229448 - 102007009 AGCD01056054;AGCD01056055;GBDF01084206;GBDK01189111;XM_013503135 XP_013358589 MODEL 8720878 protein-coding Pex1 peroxisomal biogenesis factor 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); protein transporter activity (ortholog); INVOLVED IN microtubule-based peroxisome localization (ortholog); peroxisome organization (ortholog); protein import into peroxisome matrix (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); epilepsy (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisomal membrane (ortholog) NW_004955432 9418480 9461507 - 102005290 AGCD01030906;GBDI01218587;XM_005388022;XM_005388023;XM_013515937 XP_005388079;XP_005388080;XP_013371391 MODEL 8776268 protein-coding Tmem171 transmembrane protein 171 NW_004955425 27457245 27466484 - 102008644 AGCD01025971;AGCD01025972;GBDI01311032;XM_005386075 XP_005386132 MODEL 8770540 protein-coding Prok1 prokineticin 1 INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of MAPK cascade (ortholog); regulation of angiogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN extracellular region (ortholog) NW_004955435 13930897 13935335 + 102018967 AGCD01033212;XM_005388924 XP_005388981 MODEL 8802628 protein-coding Bpifb4 BPI fold containing family B member 4 FOUND IN cytosol (ortholog) NW_004955422 28166892 28190403 - 102004398 AGCD01023344;AGCD01023345;GBBH01019084;XM_013513875;XM_013513876 XP_013369329;XP_013369330 MODEL 8736532 protein-coding LOC102016734 proteoglycan 3 NW_004955511 2414006 2418219 - 102016734 AGCD01066401;GBBH01227915;XM_005407993 XP_005408050 MODEL 8785975 protein-coding Txndc12 thioredoxin domain containing 12 ENCODES a protein that exhibits protein-disulfide reductase (glutathione) activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955464 7070555 7094991 + 102022479 AGCD01050053;GBDF01177293;XM_005398592 XP_005398649 MODEL 9036953 protein-coding Bcl9 BCL9 transcription coactivator ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); myotube differentiation involved in skeletal muscle regeneration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); Ovarian Neoplasms (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955568 785361 866986 - 102013353 AGCD01074525;AGCD01074526;GBCE01104993;XM_005413460;XM_005413462;XM_005413463;XM_013509351 XP_005413517;XP_005413519;XP_005413520;XP_013364805 MODEL 8768761 protein-coding Exoc5 exocyst complex component 5 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); establishment of planar polarity (ortholog); kidney development (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH obstructive nephropathy (ortholog); FOUND IN ciliary base (ortholog) NW_004955466 11115902 11191353 - 102026304 AGCD01051084;AGCD01051085;GBDF01013286;XM_005399204;XM_013521923;XM_013521924 XP_005399261;XP_013377377;XP_013377378 MODEL 8820526 protein-coding Treml2 triggering receptor expressed on myeloid cells like 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN T cell activation (ortholog); FOUND IN cell surface (ortholog) NW_004955437 7812005 7824344 - 102017382 AGCD01034469;GBDI01279546;XM_013517049;XM_013517050;XM_013517051 XP_013372503;XP_013372504;XP_013372505 MODEL 8857576 protein-coding Hoxd8 homeobox D8 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) NW_004955403 20530536 20532580 - 102011267 AGCD01002161;GBCQ01007513;GBCQ01009181;XM_005373414 XP_005373471 MODEL 8811122 protein-coding Atn1 atrophin 1 ENCODES a protein that exhibits JUN kinase binding (ortholog); protein domain specific binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cell killing (ortholog); cell migration (ortholog); determination of adult lifespan (ortholog); ASSOCIATED WITH Congenital Hypotonia, Epilepsy, Developmental Delay, and Digital Anomalies (ortholog); dentatorubral-pallidoluysian atrophy (ortholog); genetic disease (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955413 4511251 4524037 + 102007876 AGCD01013621;GBDF01044615;XM_005378844 XP_005378901 MODEL 8908656 protein-coding Ajuba ajuba LIM protein ENCODES a protein that exhibits actin filament binding (ortholog); alpha-catenin binding (ortholog); chromatin binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); focal adhesion assembly (ortholog); glycerophospholipid biosynthetic process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955409 37318597 37329068 + 102026082 AGCD01010507;GBDI01220023;XM_005377096 XP_005377153 MODEL 8714420 protein-coding Sypl2 synaptophysin like 2 INVOLVED IN heart development (ortholog); intracellular calcium ion homeostasis (ortholog); substantia nigra development (ortholog) NW_004955435 12889266 12901455 + 102029221 AGCD01033172;AGCD01033173;GBDI01297200;GBDI01297201;XM_005388862 XP_005388919 MODEL 9035395 protein-coding Nphs1 NPHS1 adhesion molecule, nephrin ENCODES a protein that exhibits alpha-actinin binding (ortholog); protein domain specific binding (ortholog); spectrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); gene expression (ortholog); JNK cascade (ortholog); ASSOCIATED WITH AIDS-Associated Nephropathy (ortholog); chronic kidney disease (ortholog); Diabetic Nephropathies (ortholog); FOUND IN basement membrane (ortholog); cell periphery (ortholog); focal adhesion (ortholog) NW_004955468 2715728 2734174 + 102016908 AGCD01051834;GBDJ01423688;XM_013522546;XM_013522547 XP_013378000;XP_013378001 MODEL 8720145 protein-coding LOC102021945 granzyme H-like NW_004955409 35505067 35515345 + 102021945 AGCD01010424;AGCD01010425;GBDK01074391;XM_005376986;XM_005376989;XM_005376990;XM_013510455 XP_005377043;XP_005377046;XP_005377047;XP_013365909 MODEL 8900609 protein-coding Ntpcr nucleoside-triphosphatase, cancer-related ENCODES a protein that exhibits ribonucleoside triphosphate phosphatase activity (ortholog); PARTICIPATES IN thiamine metabolic pathway; FOUND IN mitochondrion (ortholog) NW_004955492 6253087 6279016 - 102003146 AGCD01060763;AGCD01060764;GBBH01142902;XM_005404963 XP_005405020 MODEL 8702711 protein-coding LOC102025057 RBPJ-interacting and tubulin-associated protein 1-like NW_004955445 6768638 6786308 + 102025057 AGCD01039514;AGCD01039515;AGCD01039516;AGCD01039517;AGCD01039518;XM_013518238 XP_013373692 MODEL 8817976 protein-coding Arhgap20 Rho GTPase activating protein 20 ASSOCIATED WITH prostate cancer (ortholog) NW_004955412 12433350 12515922 - 102011293 AGCD01012820;GBDF01192411;XM_005378054 XP_005378111 MODEL 8856621 protein-coding Pmepa1 prostate transmembrane protein, androgen induced 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); R-SMAD binding (ortholog); WW domain binding (ortholog); INVOLVED IN negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH breast cancer (ortholog); connective tissue disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN early endosome membrane (ortholog); endosome membrane (ortholog); Golgi membrane (ortholog) NW_004955445 1837084 1847214 + 102030250 AGCD01039346;GBCE01055931;XM_005392247 XP_005392304 MODEL 8789846 protein-coding Fndc8 fibronectin type III domain containing 8 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) NW_004955481 9812402 9820070 + 102010904 AGCD01057119;GBDF01002286;XM_005402863 XP_005402920 MODEL 8982112 protein-coding Pierce1 piercer of microtubule wall 1 INVOLVED IN axoneme assembly (ortholog); cellular response to UV-C (ortholog); cilium movement (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) NW_004955513 4047764 4055692 - 102027889 AGCD01066914;GBBH01031983;XM_005408476;XM_013506706;XR_001231745;XR_001231747;XR_001231748 XP_005408533;XP_013362160 MODEL 39132651 snrna U6 U6 spliceosomal RNA 8909720 protein-coding Itga6 integrin subunit alpha 6 ENCODES a protein that exhibits insulin-like growth factor I binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell adhesion mediated by integrin (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH epidermolysis bullosa (ortholog); genetic disease (ortholog); junctional epidermolysis bullosa (ortholog); FOUND IN adherens junction (ortholog); basal part of cell (ortholog); basal plasma membrane (ortholog) NW_004955449 2590982 2665887 - 102014627 AGCD01041830;GBDK01189984;XM_005393215;XM_005393216 XP_005393272;XP_005393273 MODEL 8905003 protein-coding Cnot7 CCR4-NOT transcription complex subunit 7 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); DNA-binding transcription factor binding (ortholog); piRNA binding (ortholog); INVOLVED IN deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); defense response to virus (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH male infertility (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog); nuclear body (ortholog) NW_004955463 285228 306077 + 102008509 AGCD01049479;AGCD01049480;GBCE01118023;XM_005398331;XM_005398332;XM_005398333;XM_005398334;XM_013521505 XP_005398388;XP_005398389;XP_005398390;XP_005398391;XP_013376959 MODEL 8796179 protein-coding Ptrh2 peptidyl-tRNA hydrolase 2 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); INVOLVED IN negative regulation of anoikis (ortholog); negative regulation of gene expression (ortholog); positive regulation of anoikis (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); genetic disease (ortholog); Infantile-Onset Multisystem Neurologic, Endocrine, and Pancreatic Disease (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955451 3370761 3375979 + 102013236 AGCD01043053;GBDF01192078;XM_005393981 XP_005394038 MODEL 9019389 protein-coding Tmem91 transmembrane protein 91 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog) NW_004955555 322899 326450 + 102015991 AGCD01073024;GBDJ01319914;XM_005412342;XM_005412343;XM_005412344;XM_005412345;XM_005412346 XP_005412399;XP_005412400;XP_005412401;XP_005412402;XP_005412403 MODEL 8995308 protein-coding Eefsec eukaryotic elongation factor, selenocysteine-tRNA specific ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly (ortholog); intellectual disability (ortholog); FOUND IN ribonucleoprotein complex (ortholog) NW_004955429 15381257 15598355 - 102026029 AGCD01028805;AGCD01028806;AGCD01028807;AGCD01028808;AGCD01028809;AGCD01028810;GBCQ01066156;XM_005387043;XM_005387044 XP_005387100;XP_005387101 MODEL 8921114 protein-coding Parg poly(ADP-ribose) glycohydrolase ENCODES a protein that exhibits chromatin binding (ortholog); poly(ADP-ribose) glycohydrolase activity (ortholog); INVOLVED IN ATP generation from poly-ADP-D-ribose (ortholog); detection of bacterium (ortholog); DNA damage response (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH borna disease (ortholog); brain infarction (ortholog); Embryo Loss (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955556 435264 539935 + 102026268 AGCD01073175;AGCD01073176;GBDF01089037;XM_005412559;XM_005412563;XM_013508787;XM_013508788 XP_005412616;XP_005412620;XP_013364241;XP_013364242 MODEL 8863825 protein-coding LOC102004761 eukaryotic translation initiation factor 1A, X-chromosomal-like NW_004955446 18926932 18928944 - 102004761 AGCD01040418;GBBH01096072;XM_013518447 XP_013373901 MODEL 8750663 protein-coding Scx scleraxis bHLH transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell differentiation (ortholog); cellular response to BMP stimulus (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955454 2886981 2888829 + 102018058 AGCD01045039;GBCB01079555;GBCQ01092845;XM_013520103 XP_013375557 MODEL 8769845 protein-coding LOC102018289 histone H4 NW_004955483 827742 828500 - 102018289 AGCD01057632;XM_013503798 XP_013359252 MODEL 10292727 ncrna LOC106146916 uncharacterized LOC106146916 NW_004955504 7243247 7267024 - 106146916 AGCD01064941;AGCD01064942;GBDF01277463;XR_001231543;XR_001231544;XR_001231545 MODEL 8773591 protein-coding LOC102018719 phospholipid scramblase 2-like NW_004955474 10991013 11067397 + 102018719 AGCD01054605;AGCD01054606;AGCD01054607;AGCD01054608;GBDF01044008;XM_005401433;XM_005401434;XM_005401435;XM_005401436 XP_005401490;XP_005401491;XP_005401492;XP_005401493 MODEL 8816544 protein-coding Git1 GIT ArfGAP 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); GTPase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cell redox homeostasis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); genetic disease (ortholog); Huntington's disease (ortholog); FOUND IN calyx of Held (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955481 3671728 3681279 + 102009945 AGCD01056911;GBBH01064442;XM_005402676 XP_005402733 MODEL 8940409 protein-coding Azin1 antizyme inhibitor 1 The protein encoded by this gene belongs to the antizyme inhibitor family, which plays a role in cell growth and proliferation by maintaining polyamine homeostasis within the cell. Antizyme inhibitors are homologs of ornithine decarboxylase (ODC, the key enzyme in polyamine biosynthesis) that have lost the ability to decarboxylase ornithine; however, retain the ability to bind to antizymes. Antizymes negatively regulate intracellular polyamine levels by binding to ODC and targeting it for degradation, as well as by inhibiting polyamine uptake. Antizyme inhibitors function as positive regulators of polyamine levels by sequestering antizymes and neutralizing their effect. This gene encodes antizyme inhibitor 1, the first member of this gene family that is ubiquitously expressed, and is localized in the nucleus and cytoplasm. Overexpression of antizyme inhibitor 1 gene has been associated with increased proliferation, cellular transformation and tumorigenesis. Gene knockout studies showed that homozygous mutant mice lacking functional antizyme inhibitor 1 gene died at birth with abnormal liver morphology. [provided by RefSeq, Sep 2014] NW_004955417 27231695 27259564 - 102019802 AGCD01018541;AGCD01018542;AGCD01018543;GBBH01160932;GBCB01040687;GBCC01032994;GBCQ01062120;GBDJ01125891;NM_001291639 NP_001278568 REVIEWED 8911698 protein-coding Odam odontogenic, ameloblast associated INVOLVED IN inflammatory response (ortholog); odontogenesis (ortholog); odontogenesis of dentin-containing tooth (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955447 2653815 2661043 - 102027362 AGCD01040549;XM_005392945 XP_005393002 MODEL 8933836 protein-coding Gsdmc gasdermin C ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN intestinal epithelial cell development (ortholog); pyroptotic inflammatory response (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955461 4594967 4610037 + 102029720 AGCD01048870;XM_013521296;XM_013521297 XP_013376750;XP_013376751 MODEL 8776022 protein-coding Myo7b myosin VIIB INVOLVED IN brush border assembly (ortholog); ASSOCIATED WITH neuromuscular disease (ortholog); FOUND IN apical cytoplasm (ortholog); brush border (ortholog); microvillus (ortholog) NW_004955459 2914409 2990591 - 102029595 AGCD01048004;GBCQ01068604;XM_013521038 XP_013376492 MODEL 8848807 protein-coding Sys1 SYS1 golgi trafficking protein ASSOCIATED WITH multiple sclerosis (ortholog) NW_004955445 11934907 11975670 - 102006624 AGCD01039727;AGCD01039728;AGCD01039729;AGCD01039730;GBDJ01091542;XM_005392430;XM_005392431 XP_005392487;XP_005392488 MODEL 8842862 protein-coding Ncmap non-compact myelin associated protein ENCODES a protein that exhibits structural constituent of myelin sheath (ortholog); INVOLVED IN peripheral nervous system myelin formation (ortholog); positive regulation of myelination (ortholog); FOUND IN paranode region of axon (ortholog); plasma membrane (ortholog); Schmidt-Lanterman incisure (ortholog) NW_004955452 4335411 4380972 + 102030032 AGCD01043973;AGCD01043974;AGCD01043975;AGCD01043976;AGCD01043977;AGCD01043978;AGCD01043979;AGCD01043980;GBDJ01061735;XM_005394808;XM_005394809;XM_005394810;XM_005394811;XR_262648 XP_005394865;XP_005394866;XP_005394867;XP_005394868 MODEL 8858390 protein-coding Adgrg3 adhesion G protein-coupled receptor G3 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); B cell differentiation (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955433 15290538 15317020 + 102003270 AGCD01031751;GBBH01016106;XM_005388403;XM_013516175;XM_013516176;XM_013516177 XP_005388460;XP_013371629;XP_013371630;XP_013371631 MODEL 8867331 protein-coding Plscr1 phospholipid scramblase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); CD4 receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acute-phase response (ortholog); apoptotic process (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955474 10953381 10989100 + 102017977 AGCD01054604;AGCD01054605;GBCQ01123186;XM_005401430;XM_005401431;XM_005401432;XM_013502784 XP_005401487;XP_005401488;XP_005401489;XP_013358238 MODEL 39132652 snrna U6 U6 spliceosomal RNA 151707884 mirna MIR671 microRNA 671 39133411 snrna U4 U4 spliceosomal RNA 8878107 protein-coding LOC102016735 uncharacterized LOC102016735 NW_004955511 1249319 1283016 + 102016735 AGCD01066361;AGCD01066362;XM_013506369 XP_013361823 MODEL 8821781 protein-coding Ccn3 cellular communication network factor 3 ENCODES a protein that exhibits hormone activity (ortholog); integrin binding (ortholog); Notch binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone regeneration (ortholog); cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH COVID-19 (ortholog); long QT syndrome (ortholog); pre-eclampsia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955417 25218613 25225755 + 102006244 AGCD01018475;GBCB01111187;GBDI01264541;XM_005381909 XP_005381966 MODEL 9016505 protein-coding Pex10 peroxisomal biogenesis factor 10 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); peroxisome organization (ortholog); protein import into peroxisome matrix (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome spondylodysplastic type 2 (ortholog); genetic disease (ortholog); infantile Refsum disease (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955486 8785199 8801914 + 102008421 AGCD01059156;GBDF01083507;XM_005404172;XM_013504178;XM_013504179 XP_005404229;XP_013359632;XP_013359633 MODEL 8810979 protein-coding LOC102028874 cytochrome P450 2U1 ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); INVOLVED IN omega-hydroxylase P450 pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog) NW_004955496 1873031 1887840 - 102028874 AGCD01062260;GBCE01114123;GBDJ01264560;XM_005406282 XP_005406339 MODEL 9001794 protein-coding Bcl9l BCL9 like ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); positive regulation of epithelial to mesenchymal transition (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955412 20029988 20059057 - 102018906 AGCD01012992;GBDI01119157;XM_005378276;XM_005378277;XM_005378278;XM_005378280;XM_005378281;XM_013511109;XM_013511110 XP_005378333;XP_005378334;XP_005378335;XP_005378337;XP_005378338;XP_013366563;XP_013366564 MODEL 8805780 protein-coding Rhoa ras homolog family member A ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); alpha-beta T cell lineage commitment (ortholog); androgen receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; E-cadherin signaling pathway; eicosanoid signaling pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acute myocardial infarction (ortholog); alopecia (ortholog); FOUND IN apical junction complex (ortholog); axon (ortholog); cell cortex (ortholog) NW_004955532 1300821 1347453 - 102012473 AGCD01070177;AGCD01070178;AGCD01070179;GBDF01010839;XM_005410198;XM_005410200 XP_005410255;XP_005410257 MODEL 9057048 protein-coding Gpr183 G protein-coupled receptor 183 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); oxysterol binding (ortholog); INVOLVED IN adaptive immune response (ortholog); cell chemotaxis (ortholog); dendritic cell chemotaxis (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); IgA glomerulonephritis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955404 11264954 11277531 + 102012722 AGCD01003417;GBDI01385036;XM_005374064 XP_005374121 MODEL 8962958 protein-coding Ak1 adenylate kinase 1 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); phosphotransferase activity, phosphate group as acceptor (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); cerebellum development (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; ASSOCIATED WITH congenital nonspherocytic hemolytic anemia (ortholog); congenital nonspherocytic hemolytic anemia 3 (ortholog); hemolytic anemia (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955419 799415 807138 + 102024677 AGCD01019612;GBDF01157929;XM_005382404;XM_005382405 XP_005382461;XP_005382462 MODEL 8751030 protein-coding Odaph odontogenesis associated phosphoprotein INVOLVED IN positive regulation of biomineral tissue development (ortholog); positive regulation of enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta hypomaturation type 2A4 (ortholog) NW_004955474 1502798 1509307 + 102009830 AGCD01054256;XM_005401319 XP_005401376 MODEL 39131309 protein-coding CD99L2 CD99 molecule like 2 8830969 protein-coding Pou5f1 POU class 5 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); blastocyst growth (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Carcinogenesis (ortholog); congenital heart disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955583 995707 1003202 - 102026057 AGCD01075876;GBDF01041047;XM_005414337;XM_013509821;XM_013509822 XP_005414394;XP_013365275;XP_013365276 MODEL 8857153 protein-coding Pierce2 piercer of microtubule wall 2 INVOLVED IN axoneme assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955409 523414 530630 - 102020534 AGCD01009154;GBDJ01171942;XM_013510271;XR_001232628;XR_001232629 XP_013365725 MODEL 8990774 protein-coding C5ar2 complement C5a receptor 2 INVOLVED IN negative regulation of interleukin-6 production (ortholog); negative regulation of neutrophil chemotaxis (ortholog); negative regulation of tumor necrosis factor production (ortholog); FOUND IN apical part of cell (ortholog); basal plasma membrane (ortholog) NW_004955574 1221950 1242547 + 102008790 AGCD01075168;AGCD01075169;AGCD01075170;AGCD01075171;XM_005413863;XM_013509538;XM_013509539 XP_005413920;XP_013364992;XP_013364993 MODEL 8881740 protein-coding Prok2 prokineticin 2 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chemotaxis (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH amenorrhea (ortholog); disorder of sexual development (ortholog); genetic disease (ortholog) NW_004955421 16325519 16339458 + 102030322 AGCD01021998;GBDK01269636;XM_005383770;XM_005383771 XP_005383827;XP_005383828 MODEL 9054197 protein-coding Tmem174 transmembrane protein 174 INVOLVED IN phosphate ion homeostasis (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955425 27402376 27404414 - 102008332 AGCD01025969;GBCQ01008897;XM_005386074 XP_005386131 MODEL 9003796 protein-coding Txndc15 thioredoxin domain containing 15 INVOLVED IN cilium assembly (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); Meckel syndrome (ortholog); Meckel Syndrome 14 (ortholog); FOUND IN cilium (ortholog) NW_004955408 30067455 30087095 + 102007516 AGCD01008794;AGCD01008795;GBDK01192967;XM_005376469 XP_005376526 MODEL 10360993 protein-coding Hoxd9 homeobox D9 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior/posterior pattern specification (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); mucinous adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 12619722 12621320 + 106149620 AGCD01043415;GBCQ01041129;GBDJ01134911;XM_013519052 XP_013374506 MODEL 8933081 protein-coding Exoc6 exocyst complex component 6 INVOLVED IN erythrocyte differentiation (ortholog); PARTICIPATES IN insulin signaling pathway NW_004955425 389940 560683 - 102005729 AGCD01025182;AGCD01025183;AGCD01025184;AGCD01025185;AGCD01025186;GBDF01195546;GBDK01316958;XM_013514880 XP_013370334 MODEL 8808127 protein-coding Atoh1 atonal bHLH transcription factor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN auditory receptor cell fate determination (ortholog); auditory receptor cell fate specification (ortholog); axon guidance (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 89 (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog) NW_004955405 4461704 4462756 + 102011079 AGCD01004646;XM_005374258 XP_005374315 MODEL 9045481 protein-coding Adgrg4 adhesion G protein-coupled receptor G4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog) NW_004955489 8690268 8801358 - 102023606 AGCD01060021;XM_005404615 XP_005404672 MODEL 8711142 protein-coding Nek9 NIMA related kinase 9 ENCODES a protein that exhibits protein kinase activator activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN mitotic cell cycle (ortholog); regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH ARTHROGRYPOSIS, PERTHES DISEASE, AND UPWARD GAZE PALSY (ortholog); cleft palate (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog) NW_004955523 443832 483397 + 102011901 AGCD01068457;AGCD01068458;GBDF01189505;GBDJ01229358;XM_013507146 XP_013362600 MODEL 8993411 protein-coding Scyl1 SCY1 like pseudokinase 1 INVOLVED IN inflammatory response (ortholog); intracellular protein localization (ortholog); neuron development (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 21 (ortholog); genetic disease (ortholog); hereditary ataxia (ortholog); FOUND IN cis-Golgi network (ortholog); COPI vesicle coat (ortholog); cytoplasm (ortholog) NW_004955422 19730224 19742348 - 102008232 AGCD01023030;AGCD01023031;GBCQ01036441;XM_005384488 XP_005384545 MODEL 8941072 ncrna LOC102021946 uncharacterized LOC102021946 NW_004955461 13349769 13385164 - 102021946 AGCD01049036;AGCD01049037;GBDF01261825;XR_263085 MODEL 8944476 protein-coding Nphs2 NPHS2 stomatin family member, podocin INVOLVED IN actin cytoskeleton organization (ortholog); gene expression (ortholog); metanephric podocyte development (ortholog); ASSOCIATED WITH Albuminuria (ortholog); chronic kidney disease (ortholog); familial nephrotic syndrome (ortholog); FOUND IN cell periphery (ortholog); cell-cell junction (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955406 18862054 18885214 - 102004671 AGCD01006068;GBCQ01094701;XM_005374960;XM_005374961 XP_005375017;XP_005375018 MODEL 8737056 protein-coding LOC102004392 potassium voltage-gated channel subfamily F member 1 NW_004955487 5780814 5785142 + 102004392 AGCD01059346;GBDJ01337648;XM_005404421 XP_005404478 MODEL 9018343 protein-coding Pex11a peroxisomal biogenesis factor 11 alpha ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); peroxisome fission (ortholog); peroxisome membrane biogenesis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Dyslipidemias (ortholog); obesity (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) NW_004955416 15527925 15537497 + 102026318 AGCD01017335;GBDI01024439;XM_013512553;XR_001233330;XR_001233331 XP_013368007 MODEL 9054182 protein-coding LOC102007228 olfactory receptor 1L8-like NW_004955419 5406757 5407689 - 102007228 AGCD01019806;XM_005382527 XP_005382584 MODEL 9045991 protein-coding Ntrk1 neurotrophic receptor tyrosine kinase 1 ENCODES a protein that exhibits GPI-linked ephrin receptor activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis involved in innervation (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH Alcohol-Related Disorders (ortholog); Alcoholic Intoxication (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955545 2929704 2947579 + 102012476 AGCD01071930;GBDF01306274;XM_005411713;XM_005411714;XM_005411716 XP_005411770;XP_005411771;XP_005411773 MODEL 8712895 protein-coding Pmfbp1 polyamine modulated factor 1 binding protein 1 INVOLVED IN gene expression (ortholog); intracellular protein localization (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH male infertility (ortholog); oligospermia (ortholog); spermatogenic failure 31 (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog); sperm head (ortholog) NW_004955484 4776358 4822312 - 102018933 AGCD01058232;GBDF01043820;XM_005403532;XM_013503846;XM_013503847 XP_005403589;XP_013359300;XP_013359301 MODEL 8885558 protein-coding Arhgap21 Rho GTPase activating protein 21 INVOLVED IN establishment of Golgi localization (ortholog); Golgi organization (ortholog); maintenance of Golgi location (ortholog); FOUND IN actin cytoskeleton (ortholog); cell junction (ortholog); Golgi apparatus (ortholog) NW_004955429 4424425 4559596 + 102009304 AGCD01028489;AGCD01028490;AGCD01028491;AGCD01028492;AGCD01028493;GBDJ01053058;XM_005386906;XM_005386908;XM_005386909;XM_013515486 XP_005386963;XP_005386965;XP_005386966;XP_013370940 MODEL 8726272 protein-coding Otud7b OTU deubiquitinase 7B ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type peptidase activity (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mucosal immune response (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Weight Loss (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955413 758098 812605 + 102019900 AGCD01013490;AGCD01013491;GBDF01086853;XM_005378701;XM_005378702;XM_005378703;XM_005378704 XP_005378758;XP_005378759;XP_005378760;XP_005378761 MODEL 9036809 protein-coding Cnot8 CCR4-NOT transcription complex subunit 8 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by mRNA destabilization (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of mRNA catabolic process (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN CCR4-NOT complex (ortholog); nucleus (ortholog) NW_004955408 9112208 9132650 + 102006423 AGCD01008235;GBDK01028877;XM_005376203;XM_005376205;XM_013508686;XM_013508688;XM_013508692 XP_005376260;XP_005376262;XP_013364140;XP_013364142;XP_013364146 MODEL 8796043 protein-coding Pex26 peroxisomal biogenesis factor 26 ENCODES a protein that exhibits ATPase binding (ortholog); protein-containing complex binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN protein import into peroxisome matrix (ortholog); protein to membrane docking (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955454 6097251 6115430 + 102006311 AGCD01045214;AGCD01045215;AGCD01045216;AGCD01045217;AGCD01045218;GBCE01096655;XM_005395985 XP_005396042 MODEL 8770240 protein-coding Mtmr14 myotubularin related protein 14 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy 1 (ortholog); congenital structural myopathy (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); ruffle (ortholog) NW_004955561 1195689 1237852 + 102004757 AGCD01073844;GBDF01156955;XM_005413017;XM_005413018 XP_005413074;XP_005413075 MODEL 8890208 protein-coding Ptrhd1 peptidyl-tRNA hydrolase domain containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); NEURODEVELOPMENTAL DISORDER WITH EARLY-ONSET PARKINSONISM AND BEHAVIORAL ABNORMALITIES (ortholog); Parkinsonism (ortholog); FOUND IN mitochondrion (ortholog) NW_004955469 6909627 6913411 - 102030622 AGCD01052399;GBCQ01099830;XM_005400397 XP_005400454 MODEL 9002892 protein-coding Myo9a myosin IXA INVOLVED IN cell junction assembly (ortholog); establishment of epithelial cell apical/basal polarity (ortholog); postsynaptic specialization organization (ortholog); ASSOCIATED WITH bronchiectasis (ortholog); congenital myasthenic syndrome (ortholog); Congenital Myasthenic Syndrome 24 (ortholog); FOUND IN axonal growth cone (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955450 5049797 5256934 + 102006299 AGCD01042491;AGCD01042492;AGCD01042493;AGCD01042494;AGCD01042495;AGCD01042496;AGCD01042497;AGCD01042498;AGCD01042499;GBDF01128608;XM_005393628;XM_013518986;XM_013518987;XM_013518988;XM_013518989;XM_013518990;XM_013518991 XP_005393685;XP_013374440;XP_013374441;XP_013374442;XP_013374443;XP_013374444;XP_013374445 MODEL 8751234 protein-coding Itga7 integrin subunit alpha 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arteriosclerosis (ortholog); cardiomyopathy (ortholog); Colonic Neoplasms (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); integrin alpha7-beta1 complex (ortholog) NW_004955458 3322735 3343275 - 102018805 AGCD01047294;GBCB01006141;GBDI01076300;XM_005397251;XM_005397252;XM_013520967;XM_013520968 XP_005397308;XP_005397309;XP_013376421;XP_013376422 MODEL 8886462 protein-coding Tmem92 transmembrane protein 92 ASSOCIATED WITH Developmental Disabilities (ortholog); hereditary breast ovarian cancer syndrome (ortholog) NW_004955451 11402598 11407002 - 102011724 AGCD01043354;GBDK01195399;XM_013519099;XM_013519100;XM_013519101;XM_013519102 XP_013374553;XP_013374554;XP_013374555;XP_013374556 MODEL 9065247 protein-coding Eeig1 estrogen-induced osteoclastogenesis regulator 1 INVOLVED IN positive regulation of osteoclast differentiation (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); nucleus (ortholog) NW_004955419 707850 738763 + 102020669 AGCD01019607;AGCD01019608;GBDI01000094;GBDJ01174614;XM_005382390 XP_005382447 MODEL 8990563 protein-coding Ncoa1 nuclear receptor coactivator 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH breast carcinoma (ortholog); Breast Neoplasms (ortholog); endometrial carcinoma (ortholog); FOUND IN chromatin (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) NW_004955469 6676780 6892587 + 102028288 AGCD01052393;AGCD01052394;AGCD01052395;AGCD01052396;AGCD01052397;AGCD01052398;AGCD01052399;GBCE01085746;XM_005400388;XM_005400389;XM_005400390;XM_005400391;XM_013522653 XP_005400445;XP_005400446;XP_005400447;XP_005400448;XP_013378107 MODEL 39132653 snrna U6 U6 spliceosomal RNA 9038218 protein-coding Wnt1 Wnt family member 1 ENCODES a protein that exhibits cytokine activity (ortholog); protein domain specific binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte-dopaminergic neuron signaling (ortholog); bone development (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atherosclerosis (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955500 7797063 7811142 + 102010502 AGCD01063947;AGCD01063948;AGCD01063949;GBDF01147903;XM_005406674 XP_005406731 MODEL 8977831 pseudo LOC102018290 transmembrane protein 87B pseudogene NW_004955419 60235 292357 + 102018290 AGCD01019561;AGCD01019562;AGCD01019563;AGCD01019564;AGCD01019565;AGCD01019566;AGCD01019567;AGCD01019568;AGCD01019569;AGCD01019570;AGCD01019571 MODEL 8892808 protein-coding Park7 Parkinsonism associated deglycase ENCODES a protein that exhibits copper ion binding (ortholog); cupric ion binding (ortholog); cuprous ion binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); androgen receptor signaling pathway (ortholog); cellular detoxification of aldehyde (ortholog); PARTICIPATES IN Parkinson's disease pathway; transforming growth factor-beta signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis-parkinsonism/dementia complex 1 (ortholog); cerebral infarction (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN axon (ortholog); cell body (ortholog); chromatin (ortholog) NW_004955486 4974130 4985927 - 102003027 AGCD01059074;GBCB01086937;XM_005404061;XM_005404062;XM_005404063;XM_005404064 XP_005404118;XP_005404119;XP_005404120;XP_005404121 MODEL 10202559 ncrna LOC106146917 uncharacterized LOC106146917 NW_004955504 4410119 4427950 - 106146917 AGCD01064883;XR_001231546;XR_001231547 MODEL 8739208 pseudo LOC102025063 calmodulin-like NW_004955447 17344080 17344572 - 102025063 AGCD01041118 MODEL 8815012 protein-coding Tmem175 transmembrane protein 175 ENCODES a protein that exhibits arachidonate binding (ortholog); potassium channel activity (ortholog); potassium ion leak channel activity (ortholog); INVOLVED IN lysosomal lumen pH elevation (ortholog); neuron cellular homeostasis (ortholog); phagosome-lysosome fusion (ortholog); FOUND IN endosome (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955514 434283 453239 + 102009410 AGCD01067010;GBDF01008538;XM_005408678;XM_005408679;XM_013506755;XM_013506756;XM_013506757;XM_013506758 XP_005408735;XP_005408736;XP_013362209;XP_013362210;XP_013362211;XP_013362212 MODEL 10360312 protein-coding LOC106150159 coiled-coil domain-containing protein 177-like NW_004955466 816300 819381 + 106150159 AGCD01050677;GBBH01083110;XM_013521968 XP_013377422 MODEL 8983031 protein-coding Fndc9 fibronectin type III domain containing 9 NW_004955408 11540165 11544681 - 102014420 AGCD01008312;XM_005376231 XP_005376288 MODEL 8719892 protein-coding Tll1 tolloid like 1 ENCODES a protein that exhibits collagen binding (ortholog); ASSOCIATED WITH atrial heart septal defect 6 (ortholog); congenital heart disease (ortholog); coronary artery disease (ortholog) NW_004955403 39299461 39491638 - 102011072 AGCD01002627;AGCD01002628;AGCD01002629;AGCD01002630;GBCE01123233;GBCQ01016540;XM_005373585 XP_005373642 MODEL 9033175 protein-coding Git2 GIT ArfGAP 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH inflammatory bowel disease (ortholog); FOUND IN calyx of Held (ortholog); nucleoplasm (ortholog); presynapse (ortholog) NW_004955455 8611218 8669527 + 102014977 AGCD01045903;AGCD01045904;GBDF01251310;XM_005396431;XM_005396432;XM_005396433;XM_005396434;XM_005396435;XM_005396436;XM_005396437;XM_005396438;XM_005396442;XM_013520335;XR_001236294;XR_262844 XP_005396488;XP_005396489;XP_005396490;XP_005396491;XP_005396492;XP_005396493;XP_005396494;XP_005396495;XP_005396499;XP_013375789 MODEL 8912546 protein-coding Ak2 adenylate kinase 2 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleobase-containing compound kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); dATP metabolic process (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; de novo purine biosynthetic pathway; tenofovir pharmacokinetics pathway; ASSOCIATED WITH COVID-19 (ortholog); Deafness (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); sperm flagellum (ortholog); sperm mitochondrial sheath (ortholog) NW_004955452 11254853 11275587 - 102005553 AGCD01044333;GBCQ01035299;XM_005395104;XM_005395105 XP_005395161;XP_005395162 MODEL 39131487 protein-coding C6orf163 chromosome 6 open reading frame 163 8990182 protein-coding Syt1 synaptotagmin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sensor activity (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN calcium activated phospholipid scrambling (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); calcium-dependent activation of synaptic vesicle fusion (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Baker-Gordon Syndrome (ortholog); Experimental Seizures (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dense core granule (ortholog) NW_004955405 17840012 18372156 + 102018357 AGCD01005009;AGCD01005010;AGCD01005011;AGCD01005012;AGCD01005013;AGCD01005014;AGCD01005015;GBBH01016778;XM_005374356;XM_005374357;XM_005374358;XM_005374359 XP_005374413;XP_005374414;XP_005374415;XP_005374416 MODEL 8791664 protein-coding Cd99l2 CD99 molecule like 2 INVOLVED IN diapedesis (ortholog); homotypic cell-cell adhesion (ortholog); positive regulation of neutrophil extravasation (ortholog); ASSOCIATED WITH inclusion body myositis (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN adherens junction (ortholog); cell surface (ortholog) NW_004955498 6529039 6591728 - 102004181 AGCD01063114;AGCD01063115;AGCD01063116;AGCD01063117;AGCD01063118;GBCB01002845;XM_013505530 XP_013360984 MODEL 9010740 protein-coding Odc1 ornithine decarboxylase 1 ENCODES a protein that exhibits ornithine decarboxylase activator activity (ortholog); ornithine decarboxylase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN kidney development (ortholog); polyamine metabolic process (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN polyamine metabolic pathway; putrescine metabolic pathway; spermidine metabolic pathway; ASSOCIATED WITH atrichia with papular lesions (ortholog); Colonic Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955487 5603722 5608386 - 102028866 AGCD01059341;GBDK01136620;XM_013504362 XP_013359816 MODEL 39133695 mirna MIR675 microRNA 675 8736946 protein-coding Prokr1 prokineticin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); Hyperalgesia (ortholog); long QT syndrome (ortholog) NW_004955424 16287666 16301713 - 102020460 AGCD01024738;GBDJ01323907;XM_005385662 XP_005385719 MODEL 8743562 protein-coding Cnot9 CCR4-NOT transcription complex subunit 9 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN CCR4-NOT complex (ortholog); P-body (ortholog); protein-containing complex (ortholog) NW_004955453 14819007 14845879 - 102009142 AGCD01044875;GBBH01207555;XM_005395642;XM_005395643 XP_005395699;XP_005395700 MODEL 8888259 ncrna LOC102018720 uncharacterized LOC102018720 NW_004955415 16882130 16886583 - 102018720 AGCD01016404;XR_260301 MODEL 39131491 protein-coding HOXD9 homeobox D9 8807164 protein-coding Gsdmd gasdermin D ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); pore complex assembly (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); membrane (ortholog) NW_004955454 2265759 2270569 + 102003514 AGCD01045015;GBCE01095709;XM_005395773;XM_005395774 XP_005395830;XP_005395831 MODEL 8847647 protein-coding Bclaf1 BCL2 associated transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); Fraser syndrome 3 (ortholog); lung small cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955439 608849 641005 + 102023745 AGCD01035590;AGCD01035591;GBDF01118482;XM_005390473;XM_005390474;XM_005390475;XM_005390476;XM_005390477;XM_005390478;XM_005390479;XM_013517364;XM_013517365 XP_005390530;XP_005390531;XP_005390532;XP_005390533;XP_005390534;XP_005390535;XP_005390536;XP_013372818;XP_013372819 MODEL 8711659 protein-coding Exoc6b exocyst complex component 6B ASSOCIATED WITH schizophrenia (ortholog); spondyloepimetaphyseal dysplasia with joint laxity type 3 (ortholog) NW_004955424 12777638 13308358 + 102021892 AGCD01024619;AGCD01024620;AGCD01024621;AGCD01024622;AGCD01024623;AGCD01024624;AGCD01024625;AGCD01024626;AGCD01024627;AGCD01024628;AGCD01024629;AGCD01024630;GBDF01252038;XM_005385581;XM_005385582;XM_005385583;XM_013514675;XM_013514676;XM_013514677 XP_005385638;XP_005385639;XP_005385640;XP_013370129;XP_013370130;XP_013370131 MODEL 8979326 protein-coding Rhob ras homolog family member B ENCODES a protein that exhibits GDP binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to ionizing radiation (ortholog); ASSOCIATED WITH Avian Sarcoma (ortholog); breast cancer (ortholog); cerebral palsy (ortholog); FOUND IN cleavage furrow (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955469 2964968 2966998 + 102015099 AGCD01052289;GBCB01076295;GBCQ01002704;XM_005400352 XP_005400409 MODEL 8815230 protein-coding Gpr19 G protein-coupled receptor 19 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); FOUND IN cilium (ortholog); plasma membrane (ortholog) NW_004955413 9551156 9596279 - 102018072 AGCD01013907;AGCD01013908;GBDK01215176;XM_005378968;XM_005378969;XM_005378970;XM_013511277;XM_013511278 XP_005379025;XP_005379026;XP_005379027;XP_013366731;XP_013366732 MODEL 8766177 pseudo LOC102004762 ADP-ribosylation factor-like protein 5A pseudogene NW_004955574 1088556 1089812 - 102004762 AGCD01075153 MODEL 9067860 protein-coding Piezo1 piezo type mechanosensitive ion channel component 1 (Er blood group) ENCODES a protein that exhibits identical protein binding (ortholog); mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); INVOLVED IN detection of mechanical stimulus (ortholog); monoatomic cation transport (ortholog); positive regulation of cell-cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH dehydrated hereditary stomatocytosis 1 (ortholog); genetic disease (ortholog); hemolytic anemia (ortholog); FOUND IN cuticular plate (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) NW_004955541 2618167 2655349 - 102027113 AGCD01071419;GBDI01005578;XM_013507959;XM_013507960;XM_013507961;XM_013507962 XP_013363413;XP_013363414;XP_013363415;XP_013363416 MODEL 8706693 protein-coding Plscr3 phospholipid scramblase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); lead ion binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to lipopolysaccharide (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); obesity (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955467 9534462 9539738 + 102016998 AGCD01051516;GBDI01305134;XM_005399507;XM_013522122 XP_005399564;XP_013377576 MODEL 39131466 protein-coding CCN3 cellular communication network factor 3 8963814 protein-coding LOC102028877 desert hedgehog protein NW_004955500 7916583 7920075 - 102028877 AGCD01063959;AGCD01063960;GBCQ01087657;GBDK01383445;XM_013505717 XP_013361171 MODEL 8845608 protein-coding Txndc16 thioredoxin domain containing 16 FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955409 10593693 10680381 + 102010233 AGCD01009478;AGCD01009479;AGCD01009480;AGCD01009481;GBCQ01000790;GBCQ01094913;XM_005376781;XM_013510324 XP_005376838;XP_013365778 MODEL 9053924 protein-coding Tmem94 transmembrane protein 94 ENCODES a protein that exhibits P-type magnesium transporter activity (ortholog); INVOLVED IN embryonic brain development (ortholog); embryonic heart tube development (ortholog); intracellular magnesium ion homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Intellectual Developmental Disorder with Cardiac Defects and Dysmorphic Facies (ortholog); Nervous System Malformations (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleoplasm (ortholog) NW_004955553 2305425 2353596 + 102028585 AGCD01072935;GBDI01071197;XM_005412301;XM_005412302;XM_005412303;XM_005412305;XM_005412306;XM_005412307;XM_013508621;XM_013508622;XM_013508623;XM_013508624;XM_013508625 XP_005412358;XP_005412359;XP_005412360;XP_005412362;XP_005412363;XP_005412364;XP_013364075;XP_013364076;XP_013364077;XP_013364078;XP_013364079 MODEL 8945075 protein-coding Rasgef1a RasGEF domain family member 1A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of Ras protein signal transduction (ortholog) NW_004955546 1304126 1332436 - 102006827 AGCD01072047;AGCD01072048;GBDI01288475;XM_013508392;XM_013508393 XP_013363846;XP_013363847 MODEL 8893289 protein-coding Atoh7 atonal bHLH transcription factor 7 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN circadian rhythm (ortholog); entrainment of circadian clock (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH Foveal Hypoplasia (ortholog); Persistent Hyperplastic Primary Vitreous, Autosomal Recessive (ortholog); FOUND IN axon (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955425 20559466 20560275 - 102022722 AGCD01025740;GBCQ01086737;XM_005386097 XP_005386154 MODEL 8752588 ncrna LOC102018291 uncharacterized LOC102018291 NW_004955420 9727856 9731176 + 102018291 AGCD01020761;GBDF01025460;XR_001233744;XR_260688 MODEL 8920667 pseudo LOC102021947 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955410 10055721 10056207 + 102021947 AGCD01010788 MODEL 8776082 protein-coding Wnt10a Wnt family member 10A ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); epidermis morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Arthralgia (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); cerebrotendinous xanthomatosis (ortholog) NW_004955453 14528373 14540801 - 102030594 AGCD01044868;AGCD01044869;GBDJ01300231;XM_005395620 XP_005395677 MODEL 8980497 protein-coding Parl presenilin associated rhomboid like ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN membrane protein proteolysis (ortholog); mitochondrial fusion (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH breast carcinoma (ortholog); Cachexia (ortholog); coronary artery disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955420 23549125 23581782 + 102029086 AGCD01021248;GBDF01120915;XM_005383356 XP_005383413 MODEL 9021853 protein-coding Tlr1 toll like receptor 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipopeptide binding (ortholog); Toll-like receptor 2 binding (ortholog); INVOLVED IN cellular response to triacyl bacterial lipopeptide (ortholog); defense response (ortholog); detection of triacyl bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH aspergillosis (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog); membrane raft (ortholog); plasma membrane raft (ortholog) NW_004955443 8442419 8450318 + 102004332 AGCD01038326;GBBH01222008;GBCE01080086;XM_005391996 XP_005392053 MODEL 8919912 protein-coding Pou5f2 POU domain class 5, transcription factor 2 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog) NW_004955418 18493622 18494871 + 102020667 AGCD01019168;GBDF01005065;XM_005382262 XP_005382319 MODEL 8897081 pseudo LOC102007231 ubiquitin-40S ribosomal protein S27a-like NW_004955484 7752603 7753800 - 102007231 AGCD01058345 MODEL 9012376 pseudo LOC102004394 60S ribosomal protein L36 pseudogene NW_004955491 6461282 6485923 + 102004394 AGCD01060532;AGCD01060533 MODEL 8831141 protein-coding Pex11b peroxisomal biogenesis factor 11 beta ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN peroxisome fission (ortholog); peroxisome organization (ortholog); regulation of peroxisome size (ortholog); ASSOCIATED WITH cataract (ortholog); genetic disease (ortholog); infantile Refsum disease (ortholog); FOUND IN mitochondrion (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955568 174770 183078 + 102003497 AGCD01074505;GBDF01044494;GBDK01018814;XM_005413426 XP_005413483 MODEL 8940370 protein-coding Tll2 tolloid like 2 INVOLVED IN negative regulation of skeletal muscle tissue growth (ortholog); ASSOCIATED WITH spinal muscular atrophy (ortholog) NW_004955507 2591619 2718161 - 102017483 AGCD01065591;AGCD01065592;GBBH01045943;XM_005407577 XP_005407634 MODEL 8785931 protein-coding Pml PML nuclear body scaffold ENCODES a protein that exhibits cobalt ion binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); cell fate commitment (ortholog); PARTICIPATES IN mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); breast ductal carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 3654854 3692057 - 102020735 AGCD01042439;AGCD01042440;AGCD01042441;GBDJ01009152;XM_013518918;XM_013518919;XM_013518920;XM_013518921;XR_001235868 XP_013374372;XP_013374373;XP_013374374;XP_013374375 MODEL 8843741 protein-coding Arhgap22 Rho GTPase activating protein 22 INVOLVED IN regulation of postsynapse organization (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); pneumoconiosis (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955556 1462366 1588589 + 102007820 AGCD01073194;AGCD01073195;AGCD01073196;AGCD01073197;GBCE01045808;XM_005412590 XP_005412647 MODEL 8818102 protein-coding LOC102016739 metallothionein-4 NW_004955433 14333415 14335833 + 102016739 AGCD01031711;AGCD01031712;GBDI01354115;XM_005388354 XP_005388411 MODEL 8957824 ncrna LOC102004771 uncharacterized LOC102004771 NW_004955451 12688753 12693749 - 102004771 AGCD01043420;GBDI01181575;XR_001235990;XR_001235991;XR_262597 MODEL 8908363 protein-coding Pex3 peroxisomal biogenesis factor 3 ENCODES a protein that exhibits lipid binding (ortholog); INVOLVED IN peroxisome membrane biogenesis (ortholog); peroxisome organization (ortholog); protein import into peroxisome membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); peroxisomal membrane (ortholog) NW_004955436 16918259 16956242 - 102009213 AGCD01033936;AGCD01033937;AGCD01033938;GBDJ01025650;XM_005389251;XM_013516645 XP_005389308;XP_013372099 MODEL 9040341 protein-coding C7 complement C7 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); intracellular sodium ion homeostasis (ortholog); ASSOCIATED WITH complement component 7 deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Seizures (ortholog); FOUND IN membrane attack complex (ortholog); other organism cell membrane (ortholog); plasma membrane (ortholog) NW_004955426 25173463 25230897 + 102012222 AGCD01026705;AGCD01026706;AGCD01026707;AGCD01026708;AGCD01026709;XM_013514936 XP_013370390 MODEL 8703441 protein-coding Mtmr2 myotubularin related protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol phosphate phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); INVOLVED IN dendritic spine maintenance (ortholog); dephosphorylation (ortholog); myelin assembly (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); Charcot-Marie-Tooth disease type 4B1 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 693743 764377 - 102029489 AGCD01012494;AGCD01012495;AGCD01012496;GBCE01135603;GBDF01008769;XM_005377950 XP_005378007 MODEL 8737802 protein-coding Syt10 synaptotagmin 10 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); positive regulation of calcium ion-dependent exocytosis (ortholog); presynaptic dense core vesicle exocytosis (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); FOUND IN exocytic vesicle (ortholog); glutamatergic synapse (ortholog); presynapse (ortholog) NW_004955505 2392086 2449528 + 102026450 AGCD01064994;AGCD01064995;AGCD01064996;GBDJ01401455;XM_005407171 XP_005407228 MODEL 9062717 protein-coding Myo9b myosin IXB ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ADP binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); ARF protein signal transduction (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH celiac disease (ortholog); Familial Prostate Cancer (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cytoplasm (ortholog) NW_004955524 973576 1024351 - 102029783 AGCD01068732;GBCE01115185;XM_005409507;XM_005409508;XM_005409509;XM_005409510;XM_013507277;XM_013507278;XR_264647;XR_264648 XP_005409564;XP_005409565;XP_005409566;XP_005409567;XP_013362731;XP_013362732 MODEL 8861210 protein-coding Eeig2 EEIG family member 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955435 12061112 12126310 + 102025163 AGCD01033133;AGCD01033134;GBBH01218671;XM_005389101 XP_005389158 MODEL 39132655 snrna U6 U6 spliceosomal RNA 8852191 protein-coding Ncoa2 nuclear receptor coactivator 2 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); chromatin binding (ortholog); DNA polymerase binding (ortholog); INVOLVED IN cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered androgen signaling pathway; androgen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Chronobiology Disorders (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); nuclear body (ortholog) NW_004955444 9313748 9587109 + 102030577 AGCD01038968;AGCD01038969;AGCD01038970;AGCD01038971;GBBH01006633;GBDF01051363;XM_005392106 XP_005392163 MODEL 8957889 protein-coding Cnp 2'',3''-cyclic nucleotide 3'' phosphodiesterase ENCODES a protein that exhibits 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axonogenesis (ortholog); forebrain development (ortholog); ASSOCIATED WITH achondroplasia (ortholog); alcoholic liver cirrhosis (ortholog); Alzheimer's disease (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955451 16115137 16119261 + 102009567 AGCD01043655;GBBH01089950;XM_013519285 XP_013374739 MODEL 10264734 protein-coding LOC106146918 taste receptor type 2 member 1-like NW_004955504 6898677 6899568 - 106146918 AGCD01064930;XM_013505869 XP_013361323 MODEL 8947708 protein-coding Npl N-acetylneuraminate pyruvate lyase ENCODES a protein that exhibits identical protein binding (ortholog); N-acetylneuraminate lyase activity (ortholog); INVOLVED IN N-acetylneuraminate catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH cholestasis (ortholog) NW_004955406 21633979 21670279 + 102020303 AGCD01006137;AGCD01006138;AGCD01006139;GBCQ01042451;GBDJ01355537;XM_005375012;XM_013521483;XM_013521484 XP_005375069;XP_013376937;XP_013376938 MODEL 8763257 protein-coding LOC102025065 olfactory receptor 15-like NW_004955581 700753 701637 - 102025065 AGCD01075689;XM_013509729 XP_013365183 MODEL 9019607 protein-coding Tmem176a transmembrane protein 176A INVOLVED IN negative regulation of dendritic cell differentiation (ortholog); ASSOCIATED WITH long QT syndrome (ortholog) NW_004955491 5209426 5213194 + 102024808 AGCD01060474;GBBH01035084;XM_005404792 XP_005404849 MODEL 8965590 protein-coding Fnip1 folliculin interacting protein 1 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to starvation (ortholog); immature B cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) NW_004955408 3117258 3238223 - 102023333 AGCD01008047;AGCD01008048;AGCD01008049;AGCD01008050;GBCE01105034;XM_005376081;XM_005376082 XP_005376138;XP_005376139 MODEL 8919876 ncrna LOC102018298 uncharacterized LOC102018298 NW_004955494 7683032 7765368 - 102018298 AGCD01061554;AGCD01061555;GBCC01029716;XR_264118 MODEL 8819341 protein-coding Otulin OTU deubiquitinase with linear linkage specificity ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of inflammatory response (ortholog); nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant autoinflammation, panniculitis, and dermatosis syndrome (ortholog); autosomal recessive autoinflammation, panniculitis, and dermatosis syndrome (ortholog); immunodeficiency 107 (ortholog); FOUND IN cytoplasm (ortholog); LUBAC complex (ortholog) NW_004955426 3953852 3982532 + 102004732 AGCD01026086;AGCD01026087;GBCE01045026;GBDJ01020180;XM_013514962 XP_013370416 MODEL 8732681 protein-coding Exoc7 exocyst complex component 7 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of mitotic cytokinetic process (ortholog); protein transmembrane transport (ortholog); regulation of entry of bacterium into host cell (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH SEIZURES AND BRAIN ATROPHY (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centriolar satellite (ortholog); ciliary basal body (ortholog) NW_004955506 6150297 6166920 + 102030652 AGCD01065402;GBDF01049891;XM_005407446;XM_005407447;XM_005407448;XM_005407449;XM_005407450;XM_005407451;XM_005407452;XM_005407453 XP_005407503;XP_005407504;XP_005407505;XP_005407506;XP_005407507;XP_005407508;XP_005407509;XP_005407510 MODEL 8718147 protein-coding Ak3 adenylate kinase 3 ENCODES a protein that exhibits AMP kinase activity (ortholog); identical protein binding (ortholog); nucleoside triphosphate adenylate kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); AMP phosphorylation (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo purine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH chronic lymphocytic leukemia (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955434 8998357 9010468 - 102027332 AGCD01032282;GBBH01062690;GBCE01029526;XM_013516310 XP_013371764 MODEL 8977835 protein-coding Odf1 outer dense fiber of sperm tails 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); FOUND IN manchette (ortholog); outer dense fiber (ortholog); sperm flagellum (ortholog) NW_004955417 27145542 27150910 + 102018599 AGCD01018534;AGCD01018535;GBDK01241191;XM_005381941 XP_005381998 MODEL 39133646 mirna MIR676 microRNA 676 8754261 protein-coding Piezo2 piezo type mechanosensitive ion channel component 2 ENCODES a protein that exhibits mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN detection of mechanical stimulus involved in sensory perception (ortholog); detection of renal blood flow (ortholog); monoatomic cation transport (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); distal arthrogryposis (ortholog); distal arthrogryposis type 3 (ortholog); FOUND IN cuticular plate (ortholog); neuronal cell body membrane (ortholog); stereocilium (ortholog) NW_004955402 1534619 1873143 + 102018546 AGCD01000059;AGCD01000060;AGCD01000061;GBBH01055058;XM_005372584;XM_013514699;XM_013514720 XP_005372641;XP_013370153;XP_013370174 MODEL 10108218 ncrna LOC106150160 uncharacterized LOC106150160 NW_004955466 704973 710166 + 106150160 AGCD01050673;XR_001236807 MODEL 9041316 ncrna LOC102018722 uncharacterized LOC102018722 NW_004955476 7403453 7410048 + 102018722 AGCD01055353;GBDF01016286;XR_263625 MODEL 8921758 protein-coding Prokr2 prokineticin receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN circadian rhythm (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amphetamine abuse (ortholog); epilepsy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955415 15867017 15878471 - 102011652 AGCD01016363;GBCE01138495;XM_005380830;XM_005380831;XM_013512101 XP_005380887;XP_005380888;XP_013367555 MODEL 39133413 snrna U4 U4 spliceosomal RNA 8738667 protein-coding Mtmr4 myotubularin related protein 4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN midbody abscission (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of endocytic recycling (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); malignant mesothelioma (ortholog); muscular atrophy (ortholog); FOUND IN early endosome membrane (ortholog); early phagosome membrane (ortholog); endosome membrane (ortholog) NW_004955451 4531966 4557528 + 102024296 AGCD01043128;AGCD01043129;AGCD01043130;GBDF01188256;XM_005394015;XM_005394016;XM_013519397;XM_013519398 XP_005394072;XP_005394073;XP_013374851;XP_013374852 MODEL 9023658 protein-coding Tmem95 transmembrane protein 95 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); FOUND IN acrosomal membrane (ortholog) NW_004955467 9562723 9564818 - 102018275 AGCD01051518;GBDF01119713;XM_005399509 XP_005399566 MODEL 9048722 protein-coding Gja1 gap junction protein alpha 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-catenin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN adult heart development (ortholog); ATP transport (ortholog); atrial ventricular junction remodeling (ortholog); PARTICIPATES IN connexin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenoma (ortholog); alcohol use disorder (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell-cell contact zone (ortholog) NW_004955436 3612533 3618095 + 102018020 AGCD01033637;GBDK01142153;XM_005389132 XP_005389189 MODEL 8842814 protein-coding Ntrk2 neurotrophic receptor tyrosine kinase 2 ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); brain-derived neurotrophic factor receptor activity (ortholog); neurotrophin binding (ortholog); INVOLVED IN brain-derived neurotrophic factor receptor signaling pathway (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell surface (ortholog) NW_004955432 2284283 2629631 - 102028671 AGCD01030614;AGCD01030615;AGCD01030616;GBDJ01300372;XM_005387931;XM_005387932;XM_005387933;XM_005387934;XM_013516029 XP_005387988;XP_005387989;XP_005387990;XP_005387991;XP_013371483 MODEL 8813836 ncrna LOC102021950 uncharacterized LOC102021950 NW_004955464 6997967 7031483 + 102021950 AGCD01050051;AGCD01050052;AGCD01050053;GBDJ01111080;XR_001236684;XR_001236685;XR_263208 MODEL 8838893 protein-coding Parm1 prostate androgen-regulated mucin-like protein 1 FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) NW_004955474 1065758 1144460 + 102007887 AGCD01054239;GBDJ01141983;XM_005401315 XP_005401372 MODEL 9060210 protein-coding Gpr20 G protein-coupled receptor 20 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) NW_004955454 379024 380100 - 102015370 AGCD01044958;XM_005395722 XP_005395779 MODEL 8958132 protein-coding Rhobtb1 Rho related BTB domain containing 1 ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog) NW_004955425 14299128 14366732 - 102017254 AGCD01025558;AGCD01025559;GBDI01355365;XM_005385941;XM_005385942;XM_013514879 XP_005385998;XP_005385999;XP_013370333 MODEL 9028100 pseudo LOC102004399 suppressor of cytokine signaling 5-like NW_004955495 3002495 3005343 + 102004399 AGCD01061814;AGCD01061815 MODEL 8797074 protein-coding Tdrd9 tudor domain containing 9 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN fertilization (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH azoospermia (ortholog); COVID-19 (ortholog); male infertility (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); piP-body (ortholog) NW_004955538 2667219 2749805 + 102020712 AGCD01071136;AGCD01071137;AGCD01071138;GBDF01090041;XM_005410819;XM_005410820;XM_005410821;XM_013507899 XP_005410876;XP_005410877;XP_005410878;XP_013363353 MODEL 8790754 protein-coding Cda cytidine deaminase ENCODES a protein that exhibits cytidine deaminase activity (ortholog); identical protein binding (ortholog); nucleoside binding (ortholog); INVOLVED IN cellular response to external biotic stimulus (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955452 1131968 1156777 + 102020194 AGCD01043832;AGCD01043833;GBCQ01064996;XM_005394682 XP_005394739 MODEL 8724917 protein-coding Nelfa negative elongation factor complex member A ENCODES a protein that exhibits chromatin binding (ortholog); molecular adaptor activity (ortholog); RNA polymerase inhibitor activity (ortholog); INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of protein modification process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN NELF complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955514 1162993 1173278 - 102020367 AGCD01067037;GBCE01098373;XM_005408718 XP_005408775 MODEL 9061053 protein-coding Scyl2 SCY1 like pseudokinase 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN brain development (ortholog); clathrin-dependent endocytosis (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-4 (ortholog); genetic disease (ortholog) NW_004955405 35984667 36043581 + 102020749 AGCD01005407;AGCD01005408;GBDF01119404;XM_005374529;XM_005374530 XP_005374586;XP_005374587 MODEL 8818506 protein-coding LOC102028880 cytochrome P450 2C5-like NW_004955507 1348115 1370194 + 102028880 AGCD01065547;AGCD01065548;AGCD01065549;AGCD01065550;AGCD01065551;AGCD01065552;GBDI01308866;GBDK01216134;XM_013506233 XP_013361687 MODEL 8860233 protein-coding Ccn4 cellular communication network factor 4 INVOLVED IN bone development (ortholog); glucose homeostasis (ortholog); negative regulation of chondrocyte differentiation (ortholog); ASSOCIATED WITH Airway Remodeling (ortholog); Experimental Liver Cirrhosis (ortholog); Hyperoxia (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) NW_004955461 7748399 7780359 + 102015386 AGCD01048922;GBDF01027727;XM_005398024;XM_005398025;XM_013521349 XP_005398081;XP_005398082;XP_013376803 MODEL 8859232 protein-coding Exoc8 exocyst complex component 8 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endosome organization (ortholog); exocytosis (ortholog); extracellular matrix disassembly (ortholog); ASSOCIATED WITH Joubert syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, SEIZURES, AND BRAIN ATROPHY (ortholog); FOUND IN cell leading edge (ortholog); exocyst (ortholog); late endosome (ortholog) NW_004955492 7476866 7481186 + 102008633 AGCD01060798;GBCE01166882;XM_005404976 XP_005405033 MODEL 8834386 protein-coding Txndc17 thioredoxin domain containing 17 ENCODES a protein that exhibits protein-disulfide reductase [NAD(P)H] activity (ortholog); INVOLVED IN tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955467 12144928 12146999 + 102006442 AGCD01051625;GBDF01160110;XM_005399665 XP_005399722 MODEL 9043353 protein-coding Cnppd1 cyclin Pas1/PHO80 domain containing 1 ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); Colorectal Neoplasms (ortholog) NW_004955453 14263619 14270701 + 102021086 AGCD01044860;AGCD01044861;GBDF01081252;XM_005395584;XM_005395585 XP_005395641;XP_005395642 MODEL 8751228 protein-coding Atoh8 atonal bHLH transcription factor 8 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); E-box binding (ortholog); INVOLVED IN formation of primary germ layer (ortholog); myoblast proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 1775139 1803106 - 102018621 AGCD01024247;AGCD01024248;GBBH01041313;GBCE01007775;XM_013514738 XP_013370192 MODEL 8714037 protein-coding Ncoa3 nuclear receptor coactivator 3 ENCODES a protein that exhibits chromatin binding (ortholog); disordered domain specific binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cellular response to estradiol stimulus (ortholog); cerebellum development (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Bone Neoplasms (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955445 10020916 10085318 - 102010000 AGCD01039639;AGCD01039640;AGCD01039641;AGCD01039642;AGCD01039643;GBDF01157839;GBDI01127910;XM_005392342 XP_005392399 MODEL 9064179 protein-coding Pts 6-pyruvoyltetrahydropterin synthase ENCODES a protein that exhibits 6-pyruvoyltetrahydropterin synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN tetrahydrobiopterin biosynthetic process (ortholog); tetrahydrobiopterin metabolic process (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH BH4-deficient hyperphenylalaninemia A (ortholog); BH4-deficient hyperphenylalaninemia B (ortholog); disease of metabolism (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955412 13880937 13888562 + 102030166 AGCD01012846;AGCD01012847;GBDJ01399101;XM_005378120 XP_005378177 MODEL 8818519 protein-coding Tlr10 toll like receptor 10 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH asthma (ortholog); pulmonary tuberculosis (ortholog) NW_004955443 8442439 8468966 + 102004650 AGCD01038326;AGCD01038327;XM_005391997;XM_013518055 XP_005392054;XP_013373509 MODEL 8900591 protein-coding Pou6f1 POU class 6 homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) NW_004955547 1685365 1712028 - 102023958 AGCD01072241;AGCD01072242;GBBH01155724;XM_013508496 XP_013363950 MODEL 8958866 protein-coding Tmem176b transmembrane protein 176B INVOLVED IN negative regulation of dendritic cell differentiation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); long QT syndrome (ortholog) NW_004955491 5201832 5209117 - 102025132 AGCD01060474;GBCQ01145542;XM_005404793;XM_005404794 XP_005404850;XP_005404851 MODEL 8793435 protein-coding Pmm1 phosphomannomutase 1 ENCODES a protein that exhibits phosphomannomutase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH GLOBAL DEVELOPMENTAL DELAY, ABSENT OR HYPOPLASTIC CORPUS CALLOSUM, AND DYSMORPHIC FACIES (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955413 27090291 27097088 - 102020552 AGCD01014492;GBDI01127252;XM_005379355 XP_005379412 MODEL 8988531 protein-coding Plscr4 phospholipid scramblase 4 ENCODES a protein that exhibits CD4 receptor binding (ortholog); enzyme binding (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); sensorineural hearing loss (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) NW_004955474 11299390 11331982 + 102020330 AGCD01054617;AGCD01054618;GBBH01116620;GBDI01075931;XM_005401439 XP_005401496 MODEL 8876979 protein-coding Pex11g peroxisomal biogenesis factor 11 gamma INVOLVED IN peroxisome fission (ortholog); regulation of peroxisome size (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) NW_004955563 1737560 1743854 + 102005314 AGCD01074160;GBDF01082696;XM_005413190;XM_005413191;XM_005413192;XM_013509150 XP_005413247;XP_005413248;XP_005413249;XP_013364604 MODEL 8836714 protein-coding Ak4 adenylate kinase 4 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); nucleoside triphosphate adenylate kinase activity (ortholog); INVOLVED IN AMP metabolic process (ortholog); ATP metabolic process (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955423 25395086 25402324 - 102006256 AGCD01024070;GBCQ01001095;GBDI01026715;XM_013514473 XP_013369927 MODEL 8803018 protein-coding Arhgap23 Rho GTPase activating protein 23 ASSOCIATED WITH COVID-19 (ortholog); polycystic ovary syndrome (ortholog) NW_004955451 13627283 13667987 + 102017835 AGCD01043493;AGCD01043494;AGCD01043495;AGCD01043496;GBBH01077113;GBCE01009788;XM_013519356 XP_013374810 MODEL 39132656 snrna U6 U6 spliceosomal RNA 8783835 protein-coding Hp1bp3 heterochromatin protein 1 binding protein 3 ENCODES a protein that exhibits DNA binding (ortholog); nucleosome binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); heterochromatin organization (ortholog); regulation of cell population proliferation (ortholog); FOUND IN chromosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 1271133 1308167 - 102022773 AGCD01043840;AGCD01043841;AGCD01043842;AGCD01043843;AGCD01043844;GBDK01071809;XM_013519507 XP_013374961 MODEL 8746660 protein-coding Odf2 outer dense fiber of sperm tails 2 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); cilium organization (ortholog); intracellular protein localization (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955570 932002 966602 + 102026686 AGCD01074774;AGCD01074775;AGCD01074776;AGCD01074777;GBBH01175407;XM_005413543;XM_005413544;XM_005413545;XM_005413546;XM_005413547;XM_005413550;XM_005413552;XM_005413555;XM_013509396;XM_013509397;XM_013509398;XM_013509399;XM_013509400 XP_005413600;XP_005413601;XP_005413602;XP_005413603;XP_005413604;XP_005413607;XP_005413609;XP_005413612;XP_013364850;XP_013364851;XP_013364852;XP_013364853;XP_013364854 MODEL 8776781 protein-coding Myoc myocilin ENCODES a protein that exhibits fibronectin binding (ortholog); frizzled binding (ortholog); myosin light chain binding (ortholog); INVOLVED IN bone development (ortholog); cellular response to nerve growth factor stimulus (ortholog); clustering of voltage-gated sodium channels (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); buphthalmos (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) NW_004955406 12182115 12194683 - 102025868 AGCD01005911;AGCD01005912;GBBH01011840;XM_005374847 XP_005374904 MODEL 9062469 protein-coding Cdadc1 cytidine and dCMP deaminase domain containing 1 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); importin-alpha family protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA cytosine deamination (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955431 2724988 2767539 + 102020829 AGCD01029938;AGCD01029939;GBDK01156615;XM_005387576;XM_005387577;XM_005387578;XM_005387579;XM_005387580;XM_005387581;XM_013515745;XM_013515746 XP_005387633;XP_005387634;XP_005387635;XP_005387636;XP_005387637;XP_005387638;XP_013371199;XP_013371200 MODEL 8754776 protein-coding Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 INVOLVED IN positive regulation of cholesterol efflux (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 7095977 7198632 - 102004788 AGCD01048478;AGCD01048479;GBDJ01033319;XM_005397768;XM_013521285 XP_005397825;XP_013376739 MODEL 8781690 protein-coding Gsdme gasdermin E ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); cellular response to virus (ortholog); granzyme-mediated programmed cell death signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 5 (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955410 26700977 26761683 - 102022058 AGCD01011199;AGCD01011200;AGCD01011201;AGCD01011202;GBBH01177049;GBDF01039820;XM_013510599;XM_013510600 XP_013366053;XP_013366054 MODEL 8875456 protein-coding Pif1 PIF1 5'-to-3' DNA helicase ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-3' DNA/RNA helicase activity (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); protein-DNA-RNA complex disassembly (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN chromosome, telomeric region (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955450 10722570 10729852 + 102009336 AGCD01042634;GBBH01043890;GBBH01043904;XM_005393887 XP_005393944 MODEL 8971678 protein-coding Wnt10b Wnt family member 10B INVOLVED IN bone trabecula formation (ortholog); canonical Wnt signaling pathway (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); Neoplasm Recurrence, Local (ortholog) NW_004955500 7782782 7800281 - 102010818 AGCD01063946;AGCD01063947;AGCD01063948;GBDI01165157;XM_005406675;XM_005406676;XM_005406677;XM_005406678;XM_005406679;XM_013505648 XP_005406732;XP_005406733;XP_005406734;XP_005406735;XP_005406736;XP_013361102 MODEL 8710499 ncrna LOC102007232 uncharacterized LOC102007232 NW_004955484 9389101 9390143 - 102007232 AGCD01058415;GBDF01039018;XR_001231046 MODEL 8989680 protein-coding LOC102025067 chromosome unknown open reading frame, human C18orf54 NW_004955402 38929921 38950437 + 102025067 AGCD01000972;GBDF01004732;XM_013510824;XM_013510830;XM_013510832 XP_013366278;XP_013366284;XP_013366286 MODEL 9058040 protein-coding LOC102018299 olfactory receptor 7E24-like NW_004955495 664850 665820 - 102018299 AGCD01061648;XM_005405556 XP_005405613 MODEL 8863161 protein-coding Otulinl OTU deubiquitinase with linear linkage specificity like ENCODES a protein that exhibits ubiquitin binding (ortholog); ubiquitin-like protein peptidase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) NW_004955426 3897327 3920631 + 102008963 AGCD01026085;GBCE01055395;XM_005386124 XP_005386181 MODEL 8830948 protein-coding Pex39 peroxisomal biogenesis factor 39 NW_004955437 8912183 8912733 - 102025168 AGCD01034507;GBCE01024221;XM_005389727 XP_005389784 MODEL 8825508 protein-coding Tln1 talin 1 ENCODES a protein that exhibits integrin binding (ortholog); LIM domain binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN cell-substrate junction assembly (ortholog); cortical actin cytoskeleton organization (ortholog); cortical microtubule organization (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH capillary leak syndrome (ortholog); Neoplasm Invasiveness (ortholog); osteoporosis (ortholog); FOUND IN adherens junction (ortholog); centriolar satellite (ortholog); cytosol (ortholog) NW_004955472 568939 603676 + 102007109 AGCD01053341;GBCB01022575;XM_005401002;XM_005401004;XM_013522935 XP_005401059;XP_005401061;XP_013378389 MODEL 8967577 protein-coding Gja10 gap junction protein alpha 10 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); gamete generation (ortholog); response to light stimulus (ortholog); FOUND IN gap junction (ortholog) NW_004955411 16586673 16601999 + 102017755 AGCD01011978;XM_005415331 XP_005415388 MODEL 8821764 ncrna LOC102004400 uncharacterized LOC102004400 NW_004955497 160123 162418 + 102004400 AGCD01062402;GBDF01039971;XR_264186 MODEL 626189157 mirna MIR7-1 microRNA 7-1 9060860 protein-coding Parn poly(A)-specific ribonuclease ENCODES a protein that exhibits cation binding (ortholog); poly(A)-specific ribonuclease activity (ortholog); protein kinase binding (ortholog); INVOLVED IN box H/ACA sno(s)RNA 3'-end processing (ortholog); lncRNA processing (ortholog); miRNA catabolic process (ortholog); ASSOCIATED WITH autosomal recessive dyskeratosis congenita 6 (ortholog); dyskeratosis congenita (ortholog); genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955442 4255726 4421083 + 102016640 AGCD01037525;AGCD01037526;AGCD01037527;GBDF01159761;XM_005391134;XM_005391135;XM_005391140;XM_013517837 XP_005391191;XP_005391192;XP_005391197;XP_013373291 MODEL 8904575 protein-coding Syt11 synaptotagmin 11 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagy (ortholog); calcium ion regulated lysosome exocytosis (ortholog); establishment of vesicle localization (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955545 2054720 2074526 + 102011049 AGCD01071882;GBCE01040966;XM_005411617;XM_013508238;XM_013508239;XM_013508240 XP_005411674;XP_013363692;XP_013363693;XP_013363694 MODEL 8750635 protein-coding Rhobtb2 Rho related BTB domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 64 (ortholog); dystonia (ortholog); genetic disease (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) NW_004955403 46367390 46390551 + 102016123 AGCD01002856;GBBH01177038;XM_005373692;XM_005373693;XM_013513944 XP_005373749;XP_005373750;XP_013369398 MODEL 10090446 protein-coding Tmem177 transmembrane protein 177 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955459 10068022 10070911 - 106146234 AGCD01048179;XM_013521061 XP_013376515 MODEL 8944041 protein-coding Prom1 prominin 1 ENCODES a protein that exhibits actinin binding (ortholog); cadherin binding (ortholog); INVOLVED IN camera-type eye photoreceptor cell differentiation (ortholog); glomerular parietal epithelial cell differentiation (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Colorectal Neoplasms (ortholog); cone-rod dystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); cell surface (ortholog) NW_004955480 7955501 8059537 + 102013828 AGCD01056713;AGCD01056714;AGCD01056715;GBBH01213994;XM_005402515;XM_005402516;XM_005402519;XM_013503331 XP_005402572;XP_005402573;XP_005402576;XP_013358785 MODEL 8814832 protein-coding Nploc4 NPL4 homolog, ubiquitin recognition factor ENCODES a protein that exhibits ATPase binding (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); Golgi organization (ortholog); negative regulation of RIG-I signaling pathway (ortholog); FOUND IN nucleoplasm (ortholog); UFD1-NPL4 complex (ortholog); VCP-NPL4-UFD1 AAA ATPase complex (ortholog) NW_004955506 1451337 1513455 + 102003675 AGCD01065265;AGCD01065266;AGCD01065267;AGCD01065268;AGCD01065269;GBDF01006018;XM_005407271 XP_005407328 MODEL 8775346 protein-coding LOC102018725 somatotropin-like NW_004955478 7920783 7923119 + 102018725 AGCD01055998;GBDJ01024839;XM_005402180 XP_005402237 MODEL 9020099 protein-coding Ccn5 cellular communication network factor 5 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); regulation of cell growth (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); nucleus (ortholog) NW_004955445 12623333 12640127 - 102016645 AGCD01039759;AGCD01039760;AGCD01039761;GBDK01061750;XM_005392466;XM_013518365 XP_005392523;XP_013373819 MODEL 39133513 snrna U4 U4 spliceosomal RNA 8894819 protein-coding Fnip2 folliculin interacting protein 2 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955471 12329686 12444782 + 102019265 AGCD01053286;AGCD01053287;AGCD01053288;AGCD01053289;AGCD01053290;AGCD01053291;AGCD01053292;GBDF01304363;XM_005400966;XM_005400967;XM_013522873;XM_013522874;XM_013522875;XM_013522876;XM_013522877;XM_013522878;XM_013522879 XP_005401023;XP_005401024;XP_013378327;XP_013378328;XP_013378329;XP_013378330;XP_013378331;XP_013378332;XP_013378333 MODEL 9001903 pseudo LOC102021951 39S ribosomal protein L47, mitochondrial pseudogene NW_004955464 13716913 13717742 + 102021951 AGCD01050291 MODEL 8929673 protein-coding Txndc2 thioredoxin domain containing 2 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); flagellated sperm motility (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); sperm flagellum (ortholog) NW_004955402 2339130 2341283 - 102020396 AGCD01000075;AGCD01000076;GBDF01006901;XM_005372590;XM_013514956;XM_013514988;XM_013515047 XP_005372647;XP_013370410;XP_013370442;XP_013370501 MODEL 8826666 ncrna LOC102016740 uncharacterized LOC102016740 NW_004955521 3837816 3867568 - 102016740 AGCD01068246;AGCD01068247;GBDF01115442;XR_264608 MODEL 8713977 protein-coding Tmem97 transmembrane protein 97 ENCODES a protein that exhibits oxysterol binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); positive regulation of lipoprotein transport (ortholog); positive regulation of wound healing (ortholog); FOUND IN endoplasmic reticulum (ortholog); lysosome (ortholog); nuclear membrane (ortholog) NW_004955481 4807850 4817006 - 102009178 AGCD01056953;GBDI01175765;XM_005402770 XP_005402827 MODEL 8707504 protein-coding C8a complement C8 alpha chain ENCODES a protein that exhibits complement binding (ortholog); protein-containing complex binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH meningitis (ortholog); myocardial infarction (ortholog); Neisseriaceae Infections (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); membrane attack complex (ortholog) NW_004955464 2806859 2874444 - 102023240 AGCD01049965;AGCD01049966;XM_005398770 XP_005398827 MODEL 8878929 protein-coding Atosa atos homolog A NW_004955409 2261169 2345489 + 102018262 AGCD01009194;AGCD01009195;AGCD01009196;AGCD01009197;GBBH01090816;GBCB01023407;XM_013510275;XM_013510277 XP_013365729;XP_013365731 MODEL 8984866 pseudo LOC102018302 nucleolar GTP-binding protein 2-like NW_004955423 15646160 15649256 - 102018302 AGCD01023812;AGCD01023813 MODEL 8957701 protein-coding Pttg1 PTTG1 regulator of sister chromatid separation, securin ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); heat shock protein binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Pituitary Neoplasms (ortholog); psoriasis (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955408 14293704 14301357 + 102027493 AGCD01008391;GBDF01007519;XM_005376266;XM_005376267 XP_005376323;XP_005376324 MODEL 10202676 ncrna LOC106150161 uncharacterized LOC106150161 NW_004955466 751998 759518 + 106150161 AGCD01050673;XR_001236808 MODEL 9034690 protein-coding Tdrkh tudor and KH domain containing INVOLVED IN fertilization (ortholog); male meiotic nuclear division (ortholog); piRNA processing (ortholog); ASSOCIATED WITH azoospermia (ortholog); spinal muscular atrophy (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); pi-body (ortholog) NW_004955589 630989 649936 + 102014846 AGCD01076179;GBDF01288647;XM_005414552;XM_005414553;XM_013509940;XM_013509941;XM_013509942;XM_013509943;XM_013509944 XP_005414609;XP_005414610;XP_013365394;XP_013365395;XP_013365396;XP_013365397;XP_013365398 MODEL 10267427 pseudo LOC106146919 taste receptor type 2 member 1-like NW_004955504 6937874 6944909 - 106146919 AGCD01064931;AGCD01064932 MODEL 8938923 protein-coding Plscr5 phospholipid scramblase family member 5 NW_004955474 10855958 10903801 + 102017654 AGCD01054604;GBDF01041495;XM_005401429;XM_013502715 XP_005401486;XP_013358169 MODEL 8928379 protein-coding Rasgef1b RasGEF domain family member 1B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); systemic juvenile rheumatoid arthritis (ortholog) NW_004955433 5605548 6388880 - 102030339 AGCD01031513;AGCD01031514;AGCD01031515;AGCD01031516;AGCD01031517;AGCD01031518;AGCD01031519;AGCD01031520;AGCD01031521;AGCD01031522;AGCD01031523;AGCD01031524;AGCD01031525;AGCD01031526;AGCD01031527;AGCD01031528;AGCD01031529;AGCD01031530;AGCD01031531;AGCD01031532;AGCD01031533;GBCE01011897;XM_005388230;XM_005388233;XM_005388234;XM_013516120;XM_013516121 XP_005388287;XP_005388290;XP_005388291;XP_013371574;XP_013371575 MODEL 39133694 mirna MIR7-3 microRNA 7-3 8970682 protein-coding Ccdc121 coiled-coil domain containing 121 NW_004955469 7771788 7774261 + 102006565 AGCD01052432;GBCE01049803;XM_005400410 XP_005400467 MODEL 9060619 pseudo LOC102004774 protein FRG1 pseudogene NW_004955452 2196007 2237809 - 102004774 AGCD01043881;AGCD01043882;AGCD01043883;AGCD01043884 MODEL 8866602 protein-coding Cnpy1 canopy FGF signaling regulator 1 NW_004955491 8451254 8457584 - 102017884 AGCD01060616;GBDF01023722;XM_005404863 XP_005404920 MODEL 8815195 protein-coding Gse1 Gse1 coiled-coil protein INVOLVED IN gene expression (ortholog); in utero embryonic development (ortholog); placenta development (ortholog); ASSOCIATED WITH stomach cancer (ortholog) NW_004955541 517715 808174 + 102017504 AGCD01071354;AGCD01071355;AGCD01071356;AGCD01071357;AGCD01071358;AGCD01071359;AGCD01071360;GBCE01142303;GBDI01311842;XM_005410972;XM_005410973;XM_005410974;XM_005410975;XM_005410976 XP_005411029;XP_005411030;XP_005411031;XP_005411032;XP_005411033 MODEL 8767103 protein-coding Piga phosphatidylinositol glycan anchor biosynthesis class A INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 4B (ortholog); generalized epilepsy (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) NW_004955519 2852605 2865848 + 102017375 AGCD01067942;GBCE01011293;XM_005409170;XM_013507014;XR_001231864 XP_005409227;XP_013362468 MODEL 8726988 protein-coding Ncoa4 nuclear receptor coactivator 4 INVOLVED IN intracellular iron ion homeostasis (ortholog); protein targeting to lysosome (ortholog); response to hormone (ortholog); PARTICIPATES IN iron homeostasis pathway; ASSOCIATED WITH invasive ductal carcinoma (ortholog); ovarian carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN autolysosome (ortholog) NW_004955556 392412 413643 + 102024513 AGCD01073175;GBCQ01033190;XM_005412555;XM_005412556;XM_013508789 XP_005412612;XP_005412613;XP_013364243 MODEL 8942319 protein-coding Prom2 prominin 2 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN negative regulation of caveolin-mediated endocytosis (ortholog); negative regulation of pinocytosis (ortholog); positive regulation of cell projection organization (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); cytoplasmic vesicle (ortholog) NW_004955470 3524900 3538882 + 102012185 AGCD01052703;GBCQ01040977;XM_005400644 XP_005400701 MODEL 9001833 protein-coding Pou6f2 POU class 6 homeobox 2 ASSOCIATED WITH autistic disorder (ortholog); hypogonadotropic hypogonadism (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog) NW_004955460 4021679 4497538 - 102019574 AGCD01048427;AGCD01048428;AGCD01048429;AGCD01048430;AGCD01048431;AGCD01048432;AGCD01048433;AGCD01048434;AGCD01048435;AGCD01048436;GBDK01408737;XM_005397733 XP_005397790 MODEL 8784137 protein-coding Tlr2 toll like receptor 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acne (ortholog); acute kidney failure (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) NW_004955471 8011710 8019063 + 102006336 AGCD01053173;AGCD01053174;GBDF01040609;XM_005400927;XM_013522906 XP_005400984;XP_013378360 MODEL 9055821 protein-coding Pex12 peroxisomal biogenesis factor 12 ENCODES a protein that exhibits ubiquitin ligase activator activity (ortholog); ubiquitin protein ligase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); peroxisome organization (ortholog); protein import into peroxisome matrix (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955481 10057494 10060492 - 102018397 AGCD01057135;GBDI01354159;XM_013503459 XP_013358913 MODEL 8768970 protein-coding Nelfb negative elongation factor complex member B ENCODES a protein that exhibits RNA polymerase inhibitor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); negative regulation of stem cell differentiation (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN cytoplasm (ortholog); NELF complex (ortholog); nucleoplasm (ortholog) NW_004955513 5248190 5261018 + 102012791 AGCD01066964;GBDF01086073;XM_005408612 XP_005408669 MODEL 8866135 protein-coding Tmem98 transmembrane protein 98 INVOLVED IN negative regulation of myelination (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); negative regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH genetic disease (ortholog); Nanophthalmos 4 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); extracellular exosome (ortholog) NW_004955481 7788066 7797433 + 102028537 AGCD01057077;GBCQ01004757;GBDF01110957;XM_005402830 XP_005402887 MODEL 8821036 protein-coding Scyl3 SCY1 like pseudokinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); INVOLVED IN inflammatory response (ortholog); intracellular protein localization (ortholog); neuron development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955462 7443841 7477596 + 102008386 AGCD01049305;GBDF01279049;XM_005398176;XM_005398178;XM_005398179;XM_005398180;XM_005398181 XP_005398233;XP_005398235;XP_005398236;XP_005398237;XP_005398238 MODEL 39132657 snrna U6 U6 spliceosomal RNA 8715172 protein-coding Rhobtb3 Rho related BTB domain containing 3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); small GTPase binding (ortholog); INVOLVED IN male gonad development (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955418 16772363 16839347 - 102028966 AGCD01019128;AGCD01019129;GBCE01159877;GBDK01193526;XM_013512974 XP_013368428 MODEL 9012978 pseudo LOC102027149 LYR motif-containing protein 2 pseudogene NW_004955457 8137763 8138031 + 102027149 AGCD01046903 MODEL 8886774 protein-coding Myocd myocardin ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cardiac muscle cell myoblast differentiation (ortholog); cardiac vascular smooth muscle cell differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH aortic atherosclerosis (ortholog); atrial fibrillation (ortholog); Cardio-Renal Syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955467 4653065 4743438 - 102024324 AGCD01051374;GBDJ01385806;XM_005399343 XP_005399400 MODEL 8753441 protein-coding Parp1 poly(ADP-ribose) polymerase 1 ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); ATP generation from poly-ADP-D-ribose (ortholog); base-excision repair (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955489 520875 557609 - 102011552 AGCD01059808;AGCD01059809;GBDI01133041;XM_005404495 XP_005404552 MODEL 10089835 protein-coding LOC106146920 putative uncharacterized protein ENSP00000383407 NW_004955407 16416116 16440422 - 106146920 AGCD01007215;AGCD01007216;AGCD01007217;GBDI01335608;XM_013505892 XP_013361346 MODEL 9027761 protein-coding Tmem178a transmembrane protein 178A INVOLVED IN negative regulation of osteoclast differentiation (ortholog); regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955441 7296200 7309556 + 102014180 AGCD01036957;AGCD01036958;GBCQ01152738;XM_013517625 XP_013373079 MODEL 8887418 protein-coding Mtmr6 myotubularin related protein 6 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN phosphatidylinositol dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog) NW_004955497 4715236 4757182 - 102021780 AGCD01062585;GBDF01043253;XM_005406329;XM_005406330 XP_005406386;XP_005406387 MODEL 8914759 protein-coding Ntrk3 neurotrophic receptor tyrosine kinase 3 ENCODES a protein that exhibits GPI-linked ephrin receptor activity (ortholog); neurotrophin receptor activity (ortholog); p53 binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleolus (ortholog) NW_004955416 16652931 17018188 + 102009716 AGCD01017360;AGCD01017361;AGCD01017362;AGCD01017363;AGCD01017364;AGCD01017365;GBCE01130254;XM_005381579;XM_005381580;XM_005381581;XM_005381583 XP_005381636;XP_005381637;XP_005381638;XP_005381640 MODEL 9064812 protein-coding Wnt11 Wnt family member 11 ENCODES a protein that exhibits protein kinase activator activity (ortholog); INVOLVED IN adrenal gland development (ortholog); artery morphogenesis (ortholog); atrial septum development (ortholog); PARTICIPATES IN the Wnt/calcium signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); Animal Disease Models (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955414 15674478 15694758 + 102020902 AGCD01015187;AGCD01015188;GBDK01241149;XM_005379875;XM_005379876;XM_013512079 XP_005379932;XP_005379933;XP_013367533 MODEL 8899020 pseudo LOC102007233 THAP domain-containing protein 5 pseudogene NW_004955419 22760508 22761334 - 102007233 AGCD01020307 MODEL 8823674 protein-coding Gpr21 G protein-coupled receptor 21 INVOLVED IN glucose homeostasis (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); positive regulation of multicellular organism growth (ortholog) NW_004955419 4934587 4937370 - 102028417 AGCD01019777;XM_005382506 XP_005382563 MODEL 8833897 protein-coding Fnta farnesyltransferase, CAAX box, subunit alpha ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); alpha-tubulin binding (ortholog); CAAX-protein geranylgeranyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog); microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) NW_004955457 13260825 13294025 + 102014014 AGCD01047040;GBDF01047752;XM_005397076 XP_005397133 MODEL 8854654 protein-coding Pmm2 phosphomannomutase 2 ENCODES a protein that exhibits phosphomannomutase activity (ortholog); INVOLVED IN GDP-D-mannose biosynthetic process from fructose-6-phosphate (ortholog); GDP-mannose biosynthetic process (ortholog); GDP-mannose biosynthetic process from mannose (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); cerebellar hypoplasia (ortholog); cerebral palsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955442 9390789 9411722 - 102016753 AGCD01037679;GBBH01090482;XM_005391214;XM_005391216;XM_005391217 XP_005391271;XP_005391273;XP_005391274 MODEL 9014275 protein-coding Cnpy2 canopy FGF signaling regulator 2 INVOLVED IN negative regulation of gene expression (ortholog); regulation of low-density lipoprotein particle clearance (ortholog); ASSOCIATED WITH Craniosynostosis Syndrome, Autosomal Recessive (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog) NW_004955458 3921208 3924785 - 102007633 AGCD01047354;GBDF01083333;XM_005397307;XM_005397308 XP_005397364;XP_005397365 MODEL 8861847 protein-coding C8b complement C8 beta chain ENCODES a protein that exhibits protein-containing complex binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH complement component 6 deficiency (ortholog); genetic disease (ortholog); meningitis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); membrane attack complex (ortholog) NW_004955464 2754655 2796423 + 102022897 AGCD01049965;GBDJ01208068;XM_013521573 XP_013377027 MODEL 8875688 protein-coding Gja4 gap junction protein alpha 4 INVOLVED IN blood vessel development (ortholog); calcium ion transport (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH angiosarcoma (ortholog); coronary artery disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN connexin complex (ortholog); gap junction (ortholog) NW_004955452 12902764 12905337 + 102013375 AGCD01044370;GBCE01072844;XM_005395125;XM_013519442 XP_005395182;XP_013374896 MODEL 8815742 protein-coding Pex5 peroxisomal biogenesis factor 5 ENCODES a protein that exhibits enzyme binding (ortholog); peroxisome matrix targeting signal-1 binding (ortholog); peroxisome membrane targeting sequence binding (ortholog); INVOLVED IN cell development (ortholog); cellular response to reactive oxygen species (ortholog); cerebral cortex cell migration (ortholog); ASSOCIATED WITH Cerebrohepatorenal Syndrome, Variant Types (ortholog); Fanconi anemia complementation group D2 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955413 4736189 4755559 + 102013273 AGCD01013625;AGCD01013626;GBDF01262971;XM_013511628;XM_013511629;XM_013511630;XM_013511631;XM_013511632;XM_013511633;XM_013511634 XP_013367082;XP_013367083;XP_013367084;XP_013367085;XP_013367086;XP_013367087;XP_013367088 MODEL 8781905 protein-coding Exog exo/endonuclease G ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); endonuclease activity (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955427 25394019 25426930 - 102004733 AGCD01027539;AGCD01027540;GBBH01172707;XM_005386588 XP_005386645 MODEL 8784938 protein-coding Pp2d1 protein phosphatase 2C like domain containing 1 NW_004955430 12039391 12070440 - 102004505 AGCD01029473;AGCD01029474;AGCD01029475;AGCD01029476;AGCD01029477;AGCD01029478;AGCD01029479;GBDF01084590;XM_005387461 XP_005387518 MODEL 8960907 protein-coding Odf2l outer dense fiber of sperm tails 2 like INVOLVED IN negative regulation of cilium assembly (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955423 7777791 7819095 + 102022097 AGCD01023611;AGCD01023612;GBDF01157796;XM_005385130;XM_005385131;XM_013514560;XM_013514561;XM_013514562;XM_013514563;XM_013514564;XM_013514565;XM_013514566;XM_013514567;XM_013514568 XP_005385187;XP_005385188;XP_013370014;XP_013370015;XP_013370016;XP_013370017;XP_013370018;XP_013370019;XP_013370020;XP_013370021;XP_013370022 MODEL 8975756 protein-coding Cdan1 codanin 1 INVOLVED IN cell maturation (ortholog); cell morphogenesis (ortholog); chromatin organization (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); congenital dyserythropoietic anemia type I (ortholog); congenital dyserythropoietic anemia type Ia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endomembrane system (ortholog) NW_004955416 9393170 9403374 - 102024796 AGCD01017086;GBBH01143926;GBCE01116782;XM_013512437;XM_013512438;XM_013512439;XM_013512440;XM_013512441 XP_013367891;XP_013367892;XP_013367893;XP_013367894;XP_013367895 MODEL 8748522 protein-coding LOC102025068 tigger transposable element-derived protein 1-like NW_004955589 929222 930090 + 102025068 AGCD01076185;GBCE01110580;GBDI01331973;XM_013509949 XP_013365403 MODEL 9030056 protein-coding LOC102018726 uncharacterized LOC102018726 NW_004955478 10841511 10868929 - 102018726 AGCD01056152;GBDF01195145;XM_005402275;XM_013503217;XR_001230851;XR_001230852;XR_001230853 XP_005402332;XP_013358671 MODEL 8955464 protein-coding Npm1 nucleophosmin 1 ENCODES a protein that exhibits ATP binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cardiac muscle hypertrophy (ortholog); cell volume homeostasis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 24151070 24218783 + 102024310 AGCD01008596;AGCD01008597;AGCD01008598;AGCD01008599;AGCD01008600;AGCD01008601;AGCD01008602;AGCD01008603;AGCD01008604;GBCQ01009465;GBDF01008529;XM_013509269 XP_013364723 MODEL 8980676 protein-coding Ccn6 cellular communication network factor 6 INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH arthropathy (ortholog); breast metaplastic carcinoma (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); mitochondrion (ortholog) NW_004955526 4501331 4525866 - 102006705 AGCD01069368;GBDJ01313420;XM_013507358 XP_013362812 MODEL 8796026 ncrna LOC102004776 uncharacterized LOC102004776 NW_004955405 37643987 37648127 + 102004776 AGCD01005457;GBDJ01389922;XR_259437 MODEL 8821589 pseudo LOC102021952 ribonuclease T2 pseudogene NW_004955411 30267102 30267877 + 102021952 AGCD01012251 MODEL 10224424 protein-coding LOC106149218 cuticle collagen 2C-like NW_004955440 18745120 18746302 - 106149218 AGCD01036617;GBBH01204536;GBDI01110868;XM_013517445 XP_013372899 MODEL 9042911 ncrna LOC102004403 uncharacterized LOC102004403 NW_004955427 13583687 13585755 + 102004403 AGCD01027253;GBDF01082612;XR_001234372 MODEL 8905494 protein-coding Tln2 talin 2 INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN cytosol (ortholog); fascia adherens (ortholog); focal adhesion (ortholog) NW_004955450 12391049 12740232 - 102004540 AGCD01042701;AGCD01042702;AGCD01042703;AGCD01042704;AGCD01042705;AGCD01042706;AGCD01042707;AGCD01042708;GBCQ01035607;GBDJ01088994;XM_005393813 XP_005393870 MODEL 8891186 pseudo LOC102004783 histone deacetylase 8 pseudogene NW_004955456 1940192 1940884 - 102004783 AGCD01046243 MODEL 9046826 protein-coding LOC102018303 zinc finger protein 69-like NW_004955495 7428743 7464274 - 102018303 AGCD01062137;AGCD01062138;AGCD01062139;AGCD01062140;AGCD01062141;GBDF01077565;GBDF01187778;XM_013505355 XP_013360809 MODEL 8919477 protein-coding Prorp protein only RNase P catalytic subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); INVOLVED IN mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 54 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrial ribonuclease P complex (ortholog) NW_004955409 25791209 25920651 - 102003843 AGCD01010138;AGCD01010139;AGCD01010140;AGCD01010141;GBCB01003766;XM_005376929;XM_005376930;XM_005376931 XP_005376986;XP_005376987;XP_005376988 MODEL 10338880 ncrna LOC106150162 uncharacterized LOC106150162 NW_004955466 8237618 8253402 + 106150162 AGCD01050982;GBDF01169912;XR_001236809 MODEL 9006428 protein-coding Tdrp testis development related protein INVOLVED IN spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955403 58694134 58714440 + 102016875 AGCD01003190;GBBH01208696;XM_005373863;XM_013515063 XP_005373920;XP_013370517 MODEL 8867141 protein-coding Rasgef1c RasGEF domain family member 1C NW_004955408 482107 515132 + 102008190 AGCD01007922;AGCD01007923;GBBH01010353;XM_013507276 XP_013362730 MODEL 151707894 mirna MIR708 microRNA 708 8711742 protein-coding Pltp phospholipid transfer protein ENCODES a protein that exhibits ceramide binding (ortholog); cerebroside transfer activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN ceramide transport (ortholog); flagellated sperm motility (ortholog); glycolipid transport (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; ASSOCIATED WITH atherosclerosis (ortholog); Coronary Disease (ortholog); dry eye syndrome (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); high-density lipoprotein particle (ortholog) NW_004955445 11384723 11399217 + 102026050 AGCD01039689;AGCD01039690;GBCE01006971;XM_005392402 XP_005392459 MODEL 8755182 protein-coding Pex13 peroxisomal biogenesis factor 13 ENCODES a protein that exhibits protein transmembrane transporter activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); cerebral cortex cell migration (ortholog); fatty acid alpha-oxidation (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); genetic disease (ortholog); infantile Refsum disease (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955424 22799568 22830718 - 102025814 AGCD01024987;AGCD01024988;AGCD01024989;AGCD01024990;GBDK01230828;XM_005385748 XP_005385805 MODEL 39133515 snrna U4 U4 spliceosomal RNA 8820318 protein-coding Sdad1 SDA1 domain containing 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); FOUND IN nucleolus (ortholog) NW_004955433 690305 717737 - 102008446 AGCD01031335;GBBH01025561;XM_005388162 XP_005388219 MODEL 8872539 protein-coding Txndc5 thioredoxin domain containing 5 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Arthritis (ortholog); Neoplasm Metastasis (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955465 6034006 6053779 + 102027055 AGCD01050437;GBBH01001031;GBCE01006975;XM_005398850 XP_005398907 MODEL 8988396 protein-coding Myod1 myogenic differentiation 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to glucocorticoid stimulus (ortholog); cellular response to oxygen levels (ortholog); ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); congenital diaphragmatic hernia (ortholog); congenital myopathy 17 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955414 32523959 32526575 + 102012187 AGCD01015781;GBCB01025019;XM_005380390 XP_005380447 MODEL 8744441 protein-coding Parp10 poly(ADP-ribose) polymerase family member 10 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of fibroblast proliferation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Developmental Disabilities (ortholog); epidermolysis bullosa simplex with muscular dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955454 2644718 2651962 - 102018889 AGCD01045026;GBDI01223645;XM_005395834 XP_005395891 MODEL 8737853 protein-coding LOC102028882 olfactory receptor 10AG1-like NW_004955511 907666 908631 - 102028882 AGCD01066346;XM_005407951 XP_005408008 MODEL 8837322 protein-coding Gsg1 germ cell associated 1 ENCODES a protein that exhibits RNA polymerase binding (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955413 9932831 9949607 - 102022272 AGCD01013918;AGCD01013919;GBDF01007551;XM_005378981 XP_005379038 MODEL 8861164 protein-coding Ncoa5 nuclear receptor coactivator 5 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); FOUND IN actin cytoskeleton (ortholog); nucleoplasm (ortholog) NW_004955445 11219630 11251856 + 102021808 AGCD01039683;AGCD01039684;AGCD01039685;GBDF01047631;XM_005392387;XM_005392388;XM_013518291 XP_005392444;XP_005392445;XP_013373745 MODEL 8862130 ncrna LOC102007234 uncharacterized LOC102007234 NW_004955485 7286010 7288361 - 102007234 AGCD01058650;GBBH01030082;XR_263917 MODEL 8846606 protein-coding LOC102018733 uncharacterized LOC102018733 NW_004955420 25222759 25231032 - 102018733 AGCD01021347;GBBH01116817;XM_005383418;XR_001233696;XR_260751 XP_005383475 MODEL 8906659 protein-coding Arhgap24 Rho GTPase activating protein 24 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); negative regulation of Rac protein signal transduction (ortholog); negative regulation of ruffle assembly (ortholog); ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); focal segmental glomerulosclerosis 1 (ortholog); nephrotic syndrome (ortholog); FOUND IN focal adhesion (ortholog) NW_004955474 3786264 4224778 - 102023801 AGCD01054348;AGCD01054349;AGCD01054350;AGCD01054351;AGCD01054352;AGCD01054353;AGCD01054354;AGCD01054355;AGCD01054356;AGCD01054357;AGCD01054358;GBCB01089672;XM_005401366;XM_005401367;XM_005401368;XM_005401369;XM_005401371;XM_005401372;XM_005401373;XM_013502767 XP_005401423;XP_005401424;XP_005401425;XP_005401426;XP_005401428;XP_005401429;XP_005401430;XP_013358221 MODEL 8753221 protein-coding Syt12 synaptotagmin 12 INVOLVED IN long-term synaptic potentiation (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); spontaneous exocytosis of neurotransmitter (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); presynapse (ortholog); synaptic vesicle (ortholog) NW_004955422 18359105 18381312 - 102026878 AGCD01022946;AGCD01022947;GBCE01176509;GBDJ01407588;XM_005384360 XP_005384417 MODEL 8787094 protein-coding Efcab11 EF-hand calcium binding domain 11 NW_004955438 12269610 12420775 - 102011046 AGCD01035256;AGCD01035257;GBDF01157581;XM_005390275;XM_013517275;XM_013517276;XM_013517277;XM_013517278 XP_005390332;XP_013372729;XP_013372730;XP_013372731;XP_013372732 MODEL 9064773 protein-coding Tlr3 toll like receptor 3 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); identical protein binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); cellular response to interferon-beta (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); alcohol dependence (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955403 22977882 23001392 - 102019229 AGCD01002237;AGCD01002238;GBDK01060740;XM_005373437;XM_005373438;XM_005373439;XM_005373440;XM_013512872 XP_005373494;XP_005373495;XP_005373496;XP_005373497;XP_013368326 MODEL 9014446 protein-coding LOC102021954 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 NW_004955467 3209822 3249484 - 102021954 AGCD01051331;AGCD01051332;GBCQ01153180;XM_005399335 XP_005399392 MODEL 8936534 protein-coding Pmp22 peripheral myelin protein 22 ENCODES a protein that exhibits cytoskeletal motor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adult locomotory behavior (ortholog); adult walking behavior (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 1 (ortholog); FOUND IN bicellular tight junction (ortholog); cell surface (ortholog); compact myelin (ortholog) NW_004955467 2422181 2456925 + 102021226 AGCD01051310;GBBH01065423;XM_005399333;XM_005399334 XP_005399390;XP_005399391 MODEL 39132658 snrna U6 U6 spliceosomal RNA 8982640 protein-coding Tlnrd1 talin rod domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN stress fiber (ortholog) NW_004955416 11739879 11742381 + 102021877 AGCD01017190;AGCD01017191;GBBH01207356;GBDK01234268;XM_005381439 XP_005381496 MODEL 8771461 pseudo LOC102016742 heat shock protein HSP 90-alpha pseudogene NW_004955523 2005850 2008048 + 102016742 AGCD01068554 MODEL 8935477 protein-coding Ppa1 inorganic pyrophosphatase 1 ENCODES a protein that exhibits pyrophosphatase activity (ortholog) NW_004955437 21027516 21057712 + 102025173 AGCD01034895;AGCD01034896;GBCC01028794;GBDI01004311;XM_013517122 XP_013372576 MODEL 9045296 protein-coding Otx1 orthodenticle homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); diencephalon morphogenesis (ortholog); forebrain development (ortholog) NW_004955424 21140038 21147268 - 102015125 AGCD01024895;GBDI01218798;XM_005385723;XM_013514745 XP_005385780;XP_013370199 MODEL 8771897 protein-coding Odf4 outer dense fiber of sperm tails 4 FOUND IN motile cilium (ortholog); outer dense fiber (ortholog) NW_004955467 8556722 8570624 - 102018372 AGCD01051456;AGCD01051457;AGCD01051458;GBDF01044518;XM_005399412;XM_005399413 XP_005399469;XP_005399470 MODEL 8879653 protein-coding Tmem178b transmembrane protein 178B NW_004955494 2081953 2442845 - 102016928 AGCD01061434;AGCD01061435;AGCD01061436;AGCD01061437;GBBH01203226;XM_005405409 XP_005405466 MODEL 8900429 protein-coding Mtmr7 myotubularin related protein 7 ENCODES a protein that exhibits inositol bisphosphate phosphatase activity (ortholog); INVOLVED IN phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955552 2298597 2412579 + 102025295 AGCD01072809;AGCD01072810;AGCD01072811;AGCD01072812;AGCD01072813;GBDF01279714;XM_005412210;XM_005412213 XP_005412267;XP_005412270 MODEL 8831256 protein-coding Nts neurotensin ENCODES a protein that exhibits neuropeptide receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to lithium ion (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH Bradycardia (ortholog); breast ductal carcinoma (ortholog); Catalepsy (ortholog); FOUND IN axon terminus (ortholog); neuronal cell body (ortholog) NW_004955405 23696258 23758487 + 102006537 AGCD01005134;AGCD01005135;AGCD01005136;GBDK01406517;XM_005374412;XM_013518119 XP_005374469;XP_013373573 MODEL 8799447 protein-coding LOC102025070 uncharacterized LOC102025070 NW_004955402 21982712 22029582 - 102025070 AGCD01000595;AGCD01000596;GBDI01122543;XM_013509229 XP_013364683 MODEL 8942972 protein-coding Pttg1ip PTTG1 interacting protein ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 41753855 41769107 - 102010126 AGCD01007879;AGCD01007880;AGCD01007881;GBCE01004518;GBDI01017833;XM_005375903 XP_005375960 MODEL 8872567 protein-coding Ccna1 cyclin A1 PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cyclin A1-CDK2 complex (ortholog); microtubule cytoskeleton (ortholog) NW_004955431 9658301 9668659 - 102028450 AGCD01030190;AGCD01030191;GBDF01010345;XM_005387680 XP_005387737 MODEL 8735481 protein-coding Npm2 nucleophosmin/nucleoplasmin 2 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN blastocyst development (ortholog); chromatin remodeling (ortholog); oocyte differentiation (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955403 45517426 45539216 + 102029691 AGCD01002818;AGCD01002819;AGCD01002820;GBDF01013917;XM_005373643;XM_013513680;XM_013513692;XM_013513695;XM_013513700 XP_005373700;XP_013369134;XP_013369146;XP_013369149;XP_013369154 MODEL 9031139 protein-coding C9 complement C9 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN cell killing (ortholog); complement activation (ortholog); complement activation, GZMK pathway (ortholog); ASSOCIATED WITH age related macular degeneration 15 (ortholog); autosomal dominant polycystic kidney disease (ortholog); complement component 9 deficiency (ortholog); FOUND IN extracellular space (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955426 23790792 23824117 - 102010603 AGCD01026656;AGCD01026657;AGCD01026658;XM_013514935 XP_013370389 MODEL 8896025 protein-coding Fntb farnesyltransferase, CAAX box, subunit beta ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); geranylgeranyl diphosphate synthase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) NW_004955466 4858628 4940247 - 102024323 AGCD01050853;AGCD01050854;AGCD01050855;AGCD01050856;AGCD01050857;AGCD01050858;AGCD01050859;AGCD01050860;AGCD01050861;GBBH01005420;XM_005399112;XM_013521891 XP_005399169;XP_013377345 MODEL 9015673 protein-coding Ccdc122 coiled-coil domain containing 122 ASSOCIATED WITH leprosy (ortholog) NW_004955518 1746832 1776266 - 102009411 AGCD01067763;GBDF01238412;XM_005409072 XP_005409129 MODEL 8818196 protein-coding Nelfcd negative elongation factor complex member C/D ENCODES a protein that exhibits RNA polymerase inhibitor activity (ortholog); INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); transcription pausing by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH colon cancer (ortholog); colorectal cancer (ortholog); prostate cancer (ortholog); FOUND IN NELF complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955445 597826 610134 - 102019750 AGCD01039320;GBCE01170940;XM_013518266;XM_013518267 XP_013373720;XP_013373721 MODEL 8792797 protein-coding Tmem9b TMEM9 domain family member B INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN early endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955414 24695541 24710692 - 102025677 AGCD01015553;GBCE01031427;XM_005380250;XM_013512074 XP_005380307;XP_013367528 MODEL 8963796 protein-coding LOC102027151 uncharacterized LOC102027151 NW_004955409 3663363 3669556 - 102027151 AGCD01009258;GBCB01111656;XM_005376659;XM_013510291 XP_005376716;XP_013365745 MODEL 8919759 protein-coding Pex5l peroxisomal biogenesis factor 5 like ENCODES a protein that exhibits intracellularly cyclic nucleotide-activated monoatomic cation channel activity (ortholog); peroxisome matrix targeting signal-1 binding (ortholog); peroxisome targeting sequence binding (ortholog); INVOLVED IN maintenance of protein location (ortholog); positive regulation of corticotropin secretion (ortholog); regulated exocytosis (ortholog); FOUND IN cell tip (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 8924399 9146309 - 102015016 AGCD01020737;AGCD01020738;AGCD01020739;AGCD01020740;GBDK01112864;XM_005383051;XM_005383053;XM_005383054;XM_005383055;XM_005383056;XM_005383058;XM_013513606;XM_013513607;XM_013513608;XM_013513609 XP_005383108;XP_005383110;XP_005383111;XP_005383112;XP_005383113;XP_005383115;XP_013369060;XP_013369061;XP_013369062;XP_013369063 MODEL 8982339 protein-coding Gsg1l GSG1 like INVOLVED IN regulation of AMPA receptor activity (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); regulation of short-term neuronal synaptic plasticity (ortholog); FOUND IN asymmetric synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955493 5923154 6070909 - 102008865 AGCD01061080;AGCD01061081;AGCD01061082;GBBH01148283;XM_005405143;XM_005405144;XM_005405145 XP_005405200;XP_005405201;XP_005405202 MODEL 8942715 protein-coding Exosc1 exosome component 1 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH pontocerebellar hypoplasia type 1F (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nucleolus (ortholog) NW_004955507 3576555 3583183 - 102024828 AGCD01065631;GBDJ01181029;XM_005407601 XP_005407658 MODEL 10246376 ncrna LOC106146921 uncharacterized LOC106146921 NW_004955504 695738 702819 + 106146921 AGCD01064826;GBDF01170960;XR_001231551 MODEL 8997905 protein-coding Cdc123 cell division cycle 123 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN eukaryotic translation initiation factor 2 complex assembly (ortholog); FOUND IN cytoplasm (ortholog) NW_004955462 212090 270168 + 102006103 AGCD01049072;AGCD01049073;AGCD01049074;AGCD01049075;GBDF01085876;XM_005398078;XM_005398079 XP_005398135;XP_005398136 MODEL 8802225 protein-coding Ccna2 cyclin A2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell cycle G1/S phase transition (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN G1/S transition pathway; p53 signaling pathway; ASSOCIATED WITH Carotid Artery Injuries (ortholog); congestive heart failure (ortholog); COVID-19 (ortholog); FOUND IN cyclin A2-CDK1 complex (ortholog); cyclin A2-CDK2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) NW_004955428 18725969 18732478 + 102018419 AGCD01028069;GBDF01006345;XM_005386783 XP_005386840 MODEL 39133517 snrna U4 U4 spliceosomal RNA 9034137 protein-coding Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 ENCODES a protein that exhibits enzyme regulator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN establishment of protein localization to endoplasmic reticulum membrane (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of endoplasmic reticulum tubular network organization (ortholog); ASSOCIATED WITH amenorrhea (ortholog); cataract (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955520 3411504 3483703 + 102022531 AGCD01068102;AGCD01068103;GBDK01092646;XM_005409267;XM_005409268;XM_005409269 XP_005409324;XP_005409325;XP_005409326 MODEL 8813216 protein-coding Cnpy3 canopy FGF signaling regulator 3 ENCODES a protein that exhibits signaling receptor binding (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 60 (ortholog) NW_004955437 8930883 8939869 + 102026673 AGCD01034507;AGCD01034508;GBDI01005033;XM_005389733;XM_005389734 XP_005389790;XP_005389791 MODEL 9004357 protein-coding LOC102028883 olfactory receptor 5B3-like NW_004955511 3339841 3340767 - 102028883 AGCD01066459;XM_005408030 XP_005408087 MODEL 8802016 ncrna LOC102004406 uncharacterized LOC102004406 NW_004955429 12619449 12635931 - 102004406 AGCD01028726;AGCD01028727;GBDF01079147;XR_261325 MODEL 9065088 pseudo LOC102007239 40S ribosomal protein S7 pseudogene NW_004955421 17106374 17106961 + 102007239 AGCD01022014 MODEL 9011623 pseudo LOC102004784 40S ribosomal protein S8 pseudogene NW_004955457 6388635 6389329 - 102004784 AGCD01046838 MODEL 8812711 protein-coding Gja5 gap junction protein alpha 5 ENCODES a protein that exhibits connexin binding (ortholog); disordered domain specific binding (ortholog); gap junction channel activity (ortholog); INVOLVED IN angiogenesis (ortholog); artery morphogenesis (ortholog); atrial cardiac muscle cell to AV node cell communication by electrical coupling (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); atrial standstill 1 (ortholog); Brain Injuries (ortholog); FOUND IN cell projection (ortholog); connexin complex (ortholog); gap junction (ortholog) NW_004955568 635319 652692 + 102011154 AGCD01074524;GBDJ01063287;XM_005413452;XM_005413453;XM_005413454;XM_005413455;XM_005413456 XP_005413509;XP_005413510;XP_005413511;XP_005413512;XP_005413513 MODEL 8949887 protein-coding Rhoc ras homolog family member C INVOLVED IN apical junction assembly (ortholog); mitotic cytokinesis (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH breast cancer (ortholog); Myocardial Ischemia (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cleavage furrow (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955435 16115095 16117736 - 102005962 AGCD01033294;GBBH01000714;GBCQ01011782;XM_005388967 XP_005389024 MODEL 8720813 protein-coding Pros1 protein S ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN liver development (ortholog); negative regulation of coagulation (ortholog); positive regulation of phagocytosis (ortholog); PARTICIPATES IN protein C anticoagulant pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autosomal dominant thrombophilia due to protein S deficiency (ortholog); autosomal recessive thrombophilia due to protein S deficiency (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog) NW_004955407 3514900 3566165 + 102002997 AGCD01006863;GBCQ01040731;GBDF01157496;XM_013503591 XP_013359045 MODEL 150537122 mirna MIR744 microRNA 744 39132659 snrna U6 U6 spliceosomal RNA 39131456 protein-coding RASGEF1C RasGEF domain family member 1C 8892407 protein-coding Pigb phosphatidylinositol glycan anchor biosynthesis class B ENCODES a protein that exhibits dol-P-Man:Man(2)GlcN-acyl-PI alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 80 (ortholog); genetic disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955409 562575 577082 - 102020890 AGCD01009155;GBCE01000716;GBDI01179911;XM_013510265 XP_013365719 MODEL 9019824 protein-coding Wnt16 Wnt family member 16 INVOLVED IN bone remodeling (ortholog); cardiac epithelial to mesenchymal transition (ortholog); keratinocyte differentiation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; FOUND IN cytoplasm (ortholog); extracellular space (ortholog) NW_004955479 3065312 3077260 + 102007764 AGCD01056290;AGCD01056291;GBCE01032577;XM_005402314 XP_005402371 MODEL 8869401 ncrna LOC102006479 uncharacterized LOC102006479 NW_004955497 7454409 7464014 - 102006479 AGCD01062676;GBDF01019845;XR_264210 MODEL 39131404 protein-coding SDC1 syndecan 1 8749840 protein-coding LOC102016746 translation initiation factor IF-2-like NW_004955538 2265488 2272801 - 102016746 AGCD01071112;GBDF01194187;XM_013507822 XP_013363276 MODEL 9033162 protein-coding Pex14 peroxisomal biogenesis factor 14 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); microtubule anchoring (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH genetic disease (ortholog); ovarian cyst (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) NW_004955486 2981026 3129721 - 102014788 AGCD01059013;AGCD01059014;AGCD01059015;AGCD01059016;AGCD01059017;AGCD01059018;GBBH01091917;XM_005404016 XP_005404073 MODEL 8992513 protein-coding Odr4 odr-4 GPCR localization factor homolog NW_004955406 24806462 24837703 + 102013472 AGCD01006207;AGCD01006208;GBDF01195516;XM_013521771 XP_013377225 MODEL 9044796 protein-coding Tmem179 transmembrane protein 179 NW_004955538 3083815 3093843 - 102023524 AGCD01071145;GBDI01163970;XM_005410828 XP_005410885 MODEL 8791098 protein-coding Exosc10 exosome component 10 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); RNA exonuclease activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN CUT catabolic process (ortholog); histone mRNA catabolic process (ortholog); maturation of 5.8S rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955486 2601362 2626451 + 102011668 AGCD01058999;AGCD01059000;GBDF01048997;XM_005404005;XR_263942 XP_005404062 MODEL 8879066 protein-coding Otx2 orthodenticle homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); axon guidance (ortholog); ASSOCIATED WITH Anophthalmia (ortholog); combined pituitary hormone deficiency (ortholog); combined pituitary hormone deficiency 6 (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); nucleoplasm (ortholog) NW_004955466 10755143 10764957 - 102023791 AGCD01051074;GBDF01183552;XM_005399198;XM_013521875;XM_013521876 XP_005399255;XP_013377329;XP_013377330 MODEL 8736607 protein-coding Cdc14a cell division cycle 14A INVOLVED IN sensory perception of sound (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 32 (ortholog); Deafness (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); kinociliary basal body (ortholog); kinocilium (ortholog) NW_004955435 5099576 5230252 + 102022849 AGCD01032877;AGCD01032878;GBDF01005550;GBDJ01140455;XM_013516522 XP_013371976 MODEL 8824275 pseudo LOC102018737 dnaJ homolog subfamily A member 1-like NW_004955489 1322766 1323948 - 102018737 AGCD01059836 MODEL 8772698 ncrna LOC102018304 uncharacterized LOC102018304 NW_004955424 21693778 21701536 - 102018304 AGCD01024903;GBBH01046018;XR_261096 MODEL 9061756 protein-coding Ncoa6 nuclear receptor coactivator 6 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); enzyme binding (ortholog); INVOLVED IN brain development (ortholog); DNA damage response (ortholog); DNA-templated transcription initiation (ortholog); PARTICIPATES IN estrogen signaling pathway; glucocorticoid signaling pathway; histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); cardiomyopathy (ortholog); colon cancer (ortholog); FOUND IN histone methyltransferase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 26564535 26639516 + 102019285 AGCD01023292;AGCD01023293;AGCD01023294;GBDJ01115933;XM_005384819;XM_005384820;XM_005384822;XM_005384823;XM_013514087;XM_013514088 XP_005384876;XP_005384877;XP_005384879;XP_005384880;XP_013369541;XP_013369542 MODEL 8998142 protein-coding Ptx3 pentraxin 3 ENCODES a protein that exhibits (1->3)-beta-D-glucan binding (ortholog); complement component C1q complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cystic fibrosis (ortholog); Diabetic Foot (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) NW_004955448 8366795 8373010 + 102016862 AGCD01041442;AGCD01041443;GBBH01137479;GBCQ01115782;XM_013518628 XP_013374082 MODEL 9014751 protein-coding Efcab12 EF-hand calcium binding domain 12 ASSOCIATED WITH autistic disorder (ortholog) NW_004955429 17870292 17877846 + 102015033 AGCD01028868;GBBH01141216;GBDI01225653;XM_005387094 XP_005387151 MODEL 9012315 protein-coding Tlr4 toll like receptor 4 ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); astrocyte development (ortholog); B cell proliferation involved in immune response (ortholog); PARTICIPATES IN titanium dioxide nanoparticle response pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acanthamoeba Keratitis (ortholog); Acne Conglobata (ortholog); Acute Coronary Syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) NW_004955419 10190937 10201896 - 102030080 AGCD01019939;GBBH01209662;XM_005382606 XP_005382663 MODEL 8907721 protein-coding Tead1 TEA domain transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); embryonic heart tube morphogenesis (ortholog); heart development (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); metabolic dysfunction and alcohol associated liver disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); TEAD-YAP complex (ortholog) NW_004955414 28166562 28341275 + 102014888 AGCD01015678;AGCD01015679;GBDF01287292;XM_013511974;XM_013511975;XM_013511976;XM_013511977;XM_013511978;XM_013511979;XM_013511980;XM_013511981;XM_013511982;XM_013511983 XP_013367428;XP_013367429;XP_013367430;XP_013367431;XP_013367432;XP_013367433;XP_013367434;XP_013367435;XP_013367436;XP_013367437 MODEL 9012658 protein-coding Ccdc124 coiled-coil domain containing 124 FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955524 3349444 3355748 - 102016947 AGCD01068886;AGCD01068887;AGCD01068888;GBCQ01033885;XM_005409551 XP_005409608 MODEL 9013956 protein-coding Pmpca peptidase, mitochondrial processing subunit alpha ENCODES a protein that exhibits endopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 2 (ortholog); cerebellar ataxia (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955513 4315159 4322609 - 102006379 AGCD01066925;GBDF01081940;XM_005408489;XM_013506655 XP_005408546;XP_013362109 MODEL 8779469 protein-coding LOC102021956 alpha-2-macroglobulin ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); calcium-dependent protein binding (ortholog); endopeptidase inhibitor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); acute-phase response (ortholog); embryonic liver development (ortholog); PARTICIPATES IN Alzheimer's disease pathway; immune response pathway; inflammatory response pathway; ASSOCIATED WITH otitis media; Otitis Media with Effusion; suppurative otitis media; FOUND IN extracellular space NW_004955413 6019457 6062366 + 102021956 AGCD01013700;AGCD01013701;AGCD01013702;AGCD01013703;GBDI01021440;XM_005378889 XP_005378946 MODEL 8797486 protein-coding Nelfe negative elongation factor complex member E ENCODES a protein that exhibits chromatin binding (ortholog); mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN chromatin (ortholog); NELF complex (ortholog); nuclear body (ortholog) NW_004955437 467018 473084 - 102006071 AGCD01034137;GBDF01128156;XM_005389401 XP_005389458 MODEL 8970340 protein-coding Pex6 peroxisomal biogenesis factor 6 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); protein transporter activity (ortholog); INVOLVED IN peroxisome organization (ortholog); protein import into peroxisome matrix, receptor recycling (ortholog); protein import into peroxisome matrix, translocation (ortholog); ASSOCIATED WITH Brown-Vialetto-Van Laere syndrome 2 (ortholog); cerebellar ataxia (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisomal membrane (ortholog) NW_004955437 8945842 8964870 - 102018981 AGCD01034508;AGCD01034509;AGCD01034510;AGCD01034511;GBBH01063202;GBCE01054076;XM_013516895;XM_013516896 XP_013372349;XP_013372350 MODEL 8768814 protein-coding Ppa2 inorganic pyrophosphatase 2 ENCODES a protein that exhibits inorganic diphosphate phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN diphosphate metabolic process (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH Alcohol-Induced Sudden Cardiac Failure (ortholog); genetic disease (ortholog); Mitochondrial Cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog) NW_004955496 3765038 3831312 + 102029529 AGCD01062299;AGCD01062300;AGCD01062301;GBBH01119516;XM_005406284 XP_005406341 MODEL 8980547 protein-coding Myof myoferlin ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cellular response to heat (ortholog); glycerol metabolic process (ortholog); muscle cell development (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Hereditary Angioedema 7 (ortholog); FOUND IN caveola (ortholog); cytoplasmic vesicle (ortholog); late endosome membrane (ortholog) NW_004955425 24037 175211 + 102004183 AGCD01025173;AGCD01025174;AGCD01025175;GBDK01082816;XM_005385818 XP_005385875 MODEL 8815727 protein-coding Txndc9 thioredoxin domain containing 9 FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955470 5608980 5620386 - 102012308 AGCD01052755;AGCD01052756;GBCE01054163;XM_005400746 XP_005400803 MODEL 8800944 protein-coding Ntsr1 neurotensin receptor 1 ENCODES a protein that exhibits G protein-coupled neurotensin receptor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell surface (ortholog) NW_004955528 1348616 1394798 - 102024502 AGCD01069561;AGCD01069562;GBDF01263293;XM_005410013 XP_005410070 MODEL 8803913 protein-coding Parp11 poly(ADP-ribose) polymerase family member 11 ENCODES a protein that exhibits NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN nuclear envelope organization (ortholog); protein auto-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN nuclear body (ortholog); nuclear envelope (ortholog); nucleoplasm (ortholog) NW_004955413 1549572 1682395 - 102027503 AGCD01013522;AGCD01013523;AGCD01013524;AGCD01013525;AGCD01013526;AGCD01013527;GBDI01319482;XM_005378723;XM_013511662;XM_013511664;XM_013511665;XR_001233047 XP_005378780;XP_013367116;XP_013367118;XP_013367119 MODEL 9066665 protein-coding Syt13 synaptotagmin 13 INVOLVED IN epithelial cell differentiation (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); breast cancer (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN plasma membrane (ortholog); transport vesicle (ortholog) NW_004955422 2561660 2600863 + 102021018 AGCD01022485;AGCD01022486;AGCD01022487;GBDF01066237;XM_005384072 XP_005384129 MODEL 9022957 protein-coding Arhgap25 Rho GTPase activating protein 25 INVOLVED IN actin filament organization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); phagocytosis, engulfment (ortholog); FOUND IN phagocytic cup (ortholog) NW_004955424 16166285 16241481 - 102019292 AGCD01024738;GBDK01142007;XM_005385657;XM_005385658;XM_005385660;XM_013514712 XP_005385714;XP_005385715;XP_005385717;XP_013370166 MODEL 8760873 protein-coding Npm3 nucleophosmin/nucleoplasmin 3 INVOLVED IN rRNA processing (ortholog); rRNA transcription (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955485 8510404 8512198 + 102025013 AGCD01058717;AGCD01058718;GBBH01139937;GBDJ01088446;XM_013504107 XP_013359561 MODEL 8749432 protein-coding Cnpy4 canopy FGF signaling regulator 4 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); embryonic digit morphogenesis (ortholog); membrane organization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955573 747486 752413 - 102027916 AGCD01075004;GBCE01002034;XM_005413742 XP_005413799 MODEL 8854999 ncrna LOC102028884 uncharacterized LOC102028884 NW_004955430 747808 768242 - 102028884 AGCD01029104;AGCD01029105;AGCD01029106;GBDF01090139;XR_001234546;XR_261401;XR_261402 MODEL 8893185 protein-coding C9orf72 C9orf72-SMCR8 complex subunit ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); autophagy (ortholog); axon extension (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autoimmune disease (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autophagosome (ortholog); axonal growth cone (ortholog) NW_004955472 7299092 7337591 + 102018919 AGCD01053618;AGCD01053619;AGCD01053620;GBDF01297009;XM_005401124;XM_005401125;XM_005401126;XM_013522996;XM_013522997 XP_005401181;XP_005401182;XP_005401183;XP_013378450;XP_013378451 MODEL 10093894 protein-coding Plvap plasmalemma vesicle associated protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN developmental process (ortholog); MAPK cascade (ortholog); positive regulation of cellular extravasation (ortholog); ASSOCIATED WITH DIARRHEA 10, PROTEIN-LOSING ENTEROPATHY TYPE (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog) NW_004955524 885245 895552 + 106146320 AGCD01068722;AGCD01068723;GBCQ01008248;XM_013507239 XP_013362693 MODEL 9031505 protein-coding LOC102027154 dynein light chain 1, cytoplasmic-like NW_004955410 29349071 29349349 - 102027154 AGCD01011287;XM_005377578 XP_005377635 MODEL 8899682 protein-coding Focad focadhesin ASSOCIATED WITH genetic disease (ortholog); liver cirrhosis (ortholog); Severe Congenital Liver Disease (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog) NW_004955434 22951571 23230790 + 102003371 AGCD01032689;AGCD01032690;AGCD01032691;AGCD01032692;AGCD01032693;AGCD01032694;AGCD01032695;AGCD01032696;AGCD01032697;AGCD01032698;AGCD01032699;GBBH01214113;XM_005388739;XM_005388740;XM_005388741;XM_013516350 XP_005388796;XP_005388797;XP_005388798;XP_013371804 MODEL 10065060 protein-coding Gsg1l2 GSG1 like 2 NW_004955467 7308935 7323266 + 106150178 AGCD01051433;XM_013522037 XP_013377491 MODEL 39133689 mirna MIR761 microRNA 761 10196448 ncrna LOC106149219 uncharacterized LOC106149219 NW_004955440 16910790 16912231 - 106149219 AGCD01036543;GBDF01151502;XR_001235247 MODEL 10192189 ncrna LOC106146922 uncharacterized LOC106146922 NW_004955504 6818768 6825244 + 106146922 AGCD01064930;GBDI01247136;XR_001231554 MODEL 8963787 protein-coding Rhod ras homolog family member D ENCODES a protein that exhibits GTP binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); fibroblast growth factor receptor signaling pathway (ortholog) NW_004955422 18343611 18353269 - 102026536 AGCD01022946;GBCQ01039817;XM_005384359 XP_005384416 MODEL 9001773 protein-coding Proser1 proline and serine rich 1 NW_004955431 7288594 7314393 + 102018756 AGCD01030083;AGCD01030084;GBBH01192909;GBDF01277260;XM_005387643 XP_005387700 MODEL 39133518 snrna U4 U4 spliceosomal RNA 8952119 protein-coding Ccnb1 cyclin B1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); histone kinase activity (ortholog); patched binding (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); cellular response to iron(III) ion (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN centrosome (ortholog); cyclin B1-CDK1 complex (ortholog); cytoplasm (ortholog) NW_004955446 140661 149500 - 102009557 AGCD01039929;GBCQ01061201;XM_005392593 XP_005392650 MODEL 8819659 protein-coding Wnt2 Wnt family member 2 ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN atrial cardiac muscle tissue morphogenesis (ortholog); canonical Wnt signaling pathway (ortholog); cardiac epithelial to mesenchymal transition (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH autistic disorder (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955432 22988208 23024530 - 102015880 AGCD01031272;GBCQ01174742;GBDK01118076;XM_013515906 XP_013371360 MODEL 10281975 ncrna LOC106149754 uncharacterized LOC106149754 NW_004955452 12014777 12037407 + 106149754 AGCD01044345;GBDF01162054;XR_001236116;XR_001236117 MODEL 8863340 pseudo LOC102016752 60S ribosomal protein L10a pseudogene NW_004955440 5999017 5999919 + 102016752 AGCD01036288 MODEL 8892327 protein-coding Pex7 peroxisomal biogenesis factor 7 ENCODES a protein that exhibits enzyme binding (ortholog); peroxisome matrix targeting signal-2 binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endochondral ossification (ortholog); ether lipid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); ASSOCIATED WITH connective tissue disease (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955439 71302 138278 - 102019736 AGCD01035579;GBCB01020859;XM_005390459;XM_005390461 XP_005390516;XP_005390518 MODEL 8844647 protein-coding LOC102004408 olfactory receptor 8K5-like NW_004955511 1428393 1429358 + 102004408 AGCD01066366;XM_013506374 XP_013361828 MODEL 8943198 pseudo LOC102004786 mitochondrial pyruvate carrier 2 pseudogene NW_004955408 33338349 33338731 + 102004786 AGCD01008867 MODEL 9031305 protein-coding LOC102018305 melanoma-associated antigen 8-like NW_004955498 2272824 2273840 + 102018305 AGCD01062779;XM_005406469 XP_005406526 MODEL 8705219 pseudo LOC102018738 reactive oxygen species modulator 1 pseudogene NW_004955493 7585489 7586094 - 102018738 AGCD01061202;XM_005405270 MODEL 8919724 protein-coding Tmf1 TATA element modulatory factor 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN acrosome assembly (ortholog); androgen receptor signaling pathway (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955421 18810199 18837767 + 102013302 AGCD01022056;AGCD01022057;GBDF01004150;XM_005383813 XP_005383870 MODEL 8730795 protein-coding Gja8 gap junction protein alpha 8 ENCODES a protein that exhibits gap junction channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell-cell signaling (ortholog); gap junction-mediated intercellular transport (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); cataract (ortholog); cataract 1 multiple types (ortholog); FOUND IN connexin complex (ortholog); plasma membrane (ortholog) NW_004955568 514905 516551 - 102010529 AGCD01074522;GBDF01215343;XM_005413451 XP_005413508 MODEL 9054031 protein-coding Ncoa7 nuclear receptor coactivator 7 ENCODES a protein that exhibits nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog); negative regulation of peptidyl-cysteine S-nitrosylation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) NW_004955436 7110879 7238509 + 102003172 AGCD01033702;AGCD01033703;AGCD01033704;GBCQ01000043;XM_005389157;XM_005389158;XM_005389159;XM_005389160;XM_013516644 XP_005389214;XP_005389215;XP_005389216;XP_005389217;XP_013372098 MODEL 8866716 protein-coding Mtmr8 myotubularin related protein 8 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); phosphatidylinositol dephosphorylation (ortholog); regulation of macroautophagy (ortholog); ASSOCIATED WITH Kleine-Levin syndrome (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog); protein-containing complex (ortholog) NW_004955475 4358264 4391349 + 102023803 AGCD01054873;AGCD01054874;AGCD01054875;XM_013502805 XP_013358259 MODEL 39132660 snrna U6 U6 spliceosomal RNA 8729956 ncrna LOC102025076 uncharacterized LOC102025076 NW_004955405 30094101 30106864 + 102025076 AGCD01005263;GBDF01286792;XR_259413 MODEL 8729836 protein-coding LOC102021959 major allergen I polypeptide chain 1-like NW_004955468 4185332 4186669 + 102021959 AGCD01051895;XM_013522295 XP_013377749 MODEL 8840955 protein-coding Plxdc1 plexin domain containing 1 INVOLVED IN spinal cord development (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955451 13982443 14028235 - 102019131 AGCD01043519;AGCD01043520;AGCD01043521;AGCD01043522;GBBH01005598;GBCQ01054931;XM_013519432 XP_013374886 MODEL 9052062 protein-coding Rasgrf1 Ras protein specific guanine nucleotide releasing factor 1 ENCODES a protein that exhibits glutamate receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cell population proliferation (ortholog); cellular response to antibiotic (ortholog); ASSOCIATED WITH Drug-Induced Dyskinesia (ortholog); Dyskinesias (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN apical dendrite (ortholog); apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955533 69736 167626 - 102012360 AGCD01070312;GBDK01432528;XM_005410378;XM_013507688;XM_013507689;XM_013507690 XP_005410435;XP_013363142;XP_013363143;XP_013363144 MODEL 8775032 protein-coding Rab3il1 RAB3A interacting protein like 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog) NW_004955511 5797528 5810692 + 102006805 AGCD01066585;AGCD01066586;GBDF01005308;XM_005408129;XM_005408130;XM_013506427;XM_013506428;XM_013506429 XP_005408186;XP_005408187;XP_013361881;XP_013361882;XP_013361883 MODEL 9011820 protein-coding Pex16 peroxisomal biogenesis factor 16 INVOLVED IN ER-dependent peroxisome localization (ortholog); ER-dependent peroxisome organization (ortholog); peroxisome membrane biogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); peroxisomal membrane (ortholog) NW_004955422 2054867 2060871 + 102016483 AGCD01022478;GBDJ01313533;XM_005384058;XM_005384060;XM_005384061 XP_005384115;XP_005384117;XP_005384118 MODEL 39131302 protein-coding TMEM179B transmembrane protein 179B 8997820 protein-coding Txnip thioredoxin interacting protein ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to tumor cell (ortholog); keratinocyte differentiation (ortholog); negative regulation of cell division (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog) NW_004955568 103801 107791 + 102029239 AGCD01074503;GBCB01005233;XM_005413419 XP_005413476 MODEL 9021138 protein-coding Rhof ras homolog family member F, filopodia associated INVOLVED IN actin filament organization (ortholog) NW_004955482 6631327 6643634 + 102003447 AGCD01057408;AGCD01057409;GBBH01188779;GBDF01044096;XM_005403257 XP_005403314 MODEL 8879416 protein-coding Cdc14b cell division cycle 14B ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of ubiquitin protein ligase activity (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Premature Aging (ortholog); renal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 23303472 23445785 + 102008636 AGCD01023187;AGCD01023188;AGCD01023189;AGCD01023190;GBCE01029603;XM_005384690;XM_013514076;XM_013514077;XM_013514078;XM_013514079;XM_013514080;XM_013514081;XM_013514082;XM_013514083;XM_013514084 XP_005384747;XP_013369530;XP_013369531;XP_013369532;XP_013369533;XP_013369534;XP_013369535;XP_013369536;XP_013369537;XP_013369538 MODEL 9056732 protein-coding Parp12 poly(ADP-ribose) polymerase family member 12 ENCODES a protein that exhibits NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN protein auto-ADP-ribosylation (ortholog); transepithelial transport (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Human Influenza (ortholog); macular degeneration (ortholog); FOUND IN trans-Golgi network (ortholog) NW_004955494 3126451 3158550 + 102023488 AGCD01061467;GBDF01000030;GBDJ01190436;XM_005405428 XP_005405485 MODEL 8995125 protein-coding Pfas phosphoribosylformylglycinamidine synthase ENCODES a protein that exhibits phosphoribosylformylglycinamidine synthase activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog) NW_004955467 8640044 8660950 - 102020102 AGCD01051464;AGCD01051465;GBDJ01388665;XM_005399417;XM_005399420;XM_005399421;XM_013522183;XM_013522184 XP_005399474;XP_005399477;XP_005399478;XP_013377637;XP_013377638 MODEL 8964666 pseudo LOC102006483 uncharacterized LOC102006483 NW_004955503 49005 53085 - 102006483 AGCD01064480 MODEL 8775530 protein-coding LOC102004411 olfactory receptor 5D14-like NW_004955511 585205 608647 + 102004411 AGCD01066333;AGCD01066334;AGCD01066335;AGCD01066336;XM_013506359 XP_013361813 MODEL 8703224 pseudo LOC102018739 non-histone chromosomal protein HMG-14 pseudogene NW_004955422 17353812 17357226 + 102018739 AGCD01022920;AGCD01022921 MODEL 8738626 protein-coding Arhgap26 Rho GTPase activating protein 26 ENCODES a protein that exhibits phospholipid binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitophagy (ortholog); ASSOCIATED WITH acute myelomonocytic leukemia (ortholog); juvenile myelomonocytic leukemia (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); mitochondrion (ortholog) NW_004955415 10635410 11066551 - 102023466 AGCD01016137;AGCD01016138;AGCD01016139;AGCD01016140;AGCD01016141;AGCD01016142;AGCD01016143;AGCD01016144;AGCD01016145;AGCD01016146;GBBH01219201;GBDF01305074;XM_013512302 XP_013367756 MODEL 8948157 protein-coding Sdc1 syndecan 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); myoblast development (ortholog); positive regulation of exosomal secretion (ortholog); PARTICIPATES IN altered melanocortin system pathway; melanocortin system pathway; obesity pathway; ASSOCIATED WITH COVID-19 (ortholog); familial hyperlipidemia (ortholog); Hodgkin's lymphoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955469 2762696 2773697 - 102012750 AGCD01052281;GBDI01076441;XM_013522561 XP_013378015 MODEL 8957804 protein-coding Ca1 carbonic anhydrase 1 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); cyanamide hydratase activity (ortholog); INVOLVED IN response to fructose (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); chronic pancreatitis (ortholog); colitis (ortholog) NW_004955417 3270619 3313261 - 102004162 AGCD01017911;GBBH01037140;XM_005381742;XM_005381743;XM_013512805;XM_013512806;XM_013512807;XM_013512808 XP_005381799;XP_005381800;XP_013368259;XP_013368260;XP_013368261;XP_013368262 MODEL 8861119 protein-coding Ofcc1 orofacial cleft 1 candidate 1 FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955465 4305107 4615680 + 102019581 AGCD01050409;AGCD01050410;AGCD01050411;AGCD01050412;XM_013521801 XP_013377255 MODEL 8966488 ncrna LOC102007245 uncharacterized LOC102007245 NW_004955495 6585034 6603591 - 102007245 AGCD01062085;GBDF01168574;XR_001231373;XR_264166 MODEL 8720560 protein-coding Exosc2 exosome component 2 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); Liver Neoplasms (ortholog); pre-malignant neoplasm (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) NW_004955513 639798 648360 + 102017042 AGCD01066829;GBCE01033210;XM_005408346 XP_005408403 MODEL 8860192 protein-coding Ovca2 OVCA2 serine hydrolase domain containing ENCODES a protein that exhibits carboxylesterase activity (ortholog); INVOLVED IN response to retinoic acid (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955481 1192930 1195142 - 102012759 AGCD01056828;XM_005402599 XP_005402656 MODEL 8941077 protein-coding LOC102021961 olfactory receptor 51A4-like NW_004955414 20597523 20619093 - 102021961 AGCD01015382;AGCD01015383;AGCD01015384;XM_005380063 XP_005380120 MODEL 8824257 ncrna LOC102016755 uncharacterized LOC102016755 NW_004955442 15328395 15338155 - 102016755 AGCD01037866;GBDI01165395;XR_262152 MODEL 8882421 protein-coding Ptx4 pentraxin 4 NW_004955442 15750881 15757906 + 102028804 AGCD01037878;GBDF01124152;XM_013517677;XM_013517678 XP_013373131;XP_013373132 MODEL 8898119 protein-coding Efcab14 EF-hand calcium binding domain 14 NW_004955464 11619010 11653516 + 102012937 AGCD01050160;GBCQ01062683;XM_005398651;XM_005398653;XM_005398654;XM_005398655 XP_005398708;XP_005398710;XP_005398711;XP_005398712 MODEL 8822797 protein-coding Tead2 TEA domain transcription factor 2 ENCODES a protein that exhibits disordered domain specific binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); embryonic heart tube morphogenesis (ortholog); hippo signaling (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN nucleoplasm (ortholog); TEAD-YAP complex (ortholog); transcription regulator complex (ortholog) NW_004955559 1450706 1465947 + 102019746 AGCD01073646;GBDI01187808;XM_005412893;XM_005412894;XM_013509051;XM_013509052;XM_013509053 XP_005412950;XP_005412951;XP_013364505;XP_013364506;XP_013364507 MODEL 9010445 protein-coding Tlr5 toll like receptor 5 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to mechanical stimulus (ortholog); male gonad development (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); alcohol use disorder (ortholog); ankylosing spondylitis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955520 1544840 1562081 + 102013533 AGCD01068058;GBDI01310659;XM_013507068;XM_013507069;XM_013507070;XM_013507071;XM_013507073;XM_013507074;XR_001231877;XR_001231878;XR_001231879;XR_001231880 XP_013362522;XP_013362523;XP_013362524;XP_013362525;XP_013362527;XP_013362528 MODEL 8945498 protein-coding Pigc phosphatidylinositol glycan anchor biosynthesis class C INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH glycosylphosphatidylinositol biosynthesis defect 16 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) NW_004955406 12891187 12893935 - 102029040 AGCD01005928;GBCB01025746;XM_005374858 XP_005374915 MODEL 8917899 protein-coding LOC102028885 olfactory receptor 4P4-like NW_004955511 474783 495822 - 102028885 AGCD01066332;XM_005408193 XP_005408250 MODEL 8967272 ncrna LOC102004791 uncharacterized LOC102004791 NW_004955411 1297405 1299563 + 102004791 AGCD01011476;GBDF01076094;XR_001232844;XR_259909 MODEL 9014771 protein-coding Pmpcb peptidase, mitochondrial processing subunit beta ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN protein localization to mitochondrion (ortholog); protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH genetic disease (ortholog); multiple mitochondrial dysfunctions syndrome 6 (ortholog); FOUND IN mitochondrial processing peptidase complex (ortholog); mitochondrion (ortholog) NW_004955410 8304088 8317639 + 102016455 AGCD01010744;GBDK01229185;XM_005377228;XM_005377229 XP_005377285;XP_005377286 MODEL 8816741 protein-coding Gsk3a glycogen synthase kinase 3 alpha ENCODES a protein that exhibits protein kinase A catalytic subunit binding (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); cardiac left ventricle morphogenesis (ortholog); cell migration (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; nuclear factor, erythroid 2 like 2 signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); bipolar disorder (ortholog); FOUND IN microtubule (ortholog) NW_004955555 668641 676351 + 102015461 AGCD01073043;GBDJ01086213;GBDK01081429;XM_013508754 XP_013364208 MODEL 39133683 mirna MIR767 microRNA 767 39133520 snrna U4 U4 spliceosomal RNA 10184165 ncrna LOC106146923 uncharacterized LOC106146923 NW_004955505 4322526 4323509 + 106146923 AGCD01065102;GBDF01256858;XR_001231569 MODEL 39132661 snrna U6 U6 spliceosomal RNA 9037821 protein-coding Ntsr2 neurotensin receptor 2 ENCODES a protein that exhibits G protein-coupled neurotensin receptor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN exploration behavior (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); FOUND IN cell surface (ortholog); dendritic shaft (ortholog); membrane (ortholog) NW_004955487 6121277 6136030 - 102019815 AGCD01059355;AGCD01059356;AGCD01059357;AGCD01059358;XM_013504337 XP_013359791 MODEL 8772552 ncrna LOC102006486 uncharacterized LOC102006486 NW_004955429 12941851 12943908 - 102006486 AGCD01028733;GBDI01366543;XR_261327 MODEL 8758810 protein-coding Nell1 neural EGFL like 1 ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN negative regulation of osteoblast proliferation (ortholog); negative regulation of protein catabolic process (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH craniosynostosis (ortholog); esophagus adenocarcinoma (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nuclear envelope (ortholog) NW_004955476 1445234 2236954 + 102008219 AGCD01055206;AGCD01055207;AGCD01055208;AGCD01055209;AGCD01055210;AGCD01055211;AGCD01055212;AGCD01055213;AGCD01055214;AGCD01055215;AGCD01055216;AGCD01055217;AGCD01055218;AGCD01055219;AGCD01055220;GBBH01168145;XM_005401727;XM_005401728 XP_005401784;XP_005401785 MODEL 8768302 protein-coding Ppara peroxisome proliferator activated receptor alpha ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); cellular response to fructose stimulus (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney tubular necrosis (ortholog); alcohol use disorder (ortholog); FOUND IN fibrillar center (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955413 30306563 30366245 + 102008082 AGCD01014605;AGCD01014606;AGCD01014607;AGCD01014608;GBDJ01304514;XM_005379496;XM_005379497;XM_005379498;XM_005379499;XM_005379500;XM_013511380 XP_005379553;XP_005379554;XP_005379555;XP_005379556;XP_005379557;XP_013366834 MODEL 10255180 protein-coding Proser2 proline and serine rich 2 NW_004955421 27809610 27823125 + 106148411 AGCD01022296;AGCD01022297;GBCB01022185;GBDJ01030727;XM_013513651 XP_013369105 MODEL 10313164 ncrna LOC106149756 uncharacterized LOC106149756 NW_004955405 42446481 42449304 - 106149756 AGCD01005582;GBDF01016949;XR_001236119 MODEL 8996714 protein-coding Ccnb1ip1 cyclin B1 interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst formation (ortholog); chiasma assembly (ortholog); reciprocal meiotic recombination (ortholog); FOUND IN condensed nuclear chromosome (ortholog); synaptonemal complex (ortholog) NW_004955550 1108764 1138862 - 102021602 AGCD01072549;AGCD01072550;AGCD01072551;GBDK01013864;XM_005412050;XM_005412057;XM_005412059;XM_013508561;XM_013508562;XM_013508563;XM_013508564;XM_013508565;XM_013508566;XM_013508567;XM_013508568 XP_005412107;XP_005412114;XP_005412116;XP_013364015;XP_013364016;XP_013364017;XP_013364018;XP_013364019;XP_013364020;XP_013364021;XP_013364022 MODEL 8832082 protein-coding Wnt2b Wnt family member 2B INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to starvation (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Diarrhea 9 (ortholog); endodermal sinus tumor (ortholog); Failure to Thrive (ortholog) NW_004955435 15948262 15962958 + 102003274 AGCD01033291;GBDF01056432;XM_005388958;XM_013516420 XP_005389015;XP_013371874 MODEL 8812191 pseudo LOC102018311 olfactory receptor 8K3-like NW_004955511 1346191 1347156 + 102018311 AGCD01066365 MODEL 8726489 pseudo LOC102027155 septin-7-like NW_004955463 14303925 14306398 + 102027155 AGCD01049906 MODEL 8738394 protein-coding Tmem18 transmembrane protein 18 INVOLVED IN cell migration (ortholog); eating behavior (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH obesity (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN nuclear membrane (ortholog) NW_004955487 474478 480102 - 102006466 AGCD01059218;GBBH01165952;XM_005404338 XP_005404395 MODEL 8738783 protein-coding Npnt nephronectin ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cell-cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); ASSOCIATED WITH bilateral renal aplasia (ortholog); renal agenesis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955496 3321310 3388625 - 102029197 AGCD01062284;GBCE01032385;XM_013505415 XP_013360869 MODEL 9060298 protein-coding Syt14 synaptotagmin 14 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid binding (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 11 (ortholog); Spinocerebellar Ataxias (ortholog) NW_004955489 2017884 2275834 - 102019704 AGCD01059856;AGCD01059857;AGCD01059858;AGCD01059859;AGCD01059860;AGCD01059861;AGCD01059862;GBDF01276744;GBDF01276752;XM_013504506 XP_013359960 MODEL 8856865 protein-coding Rhog ras homolog family member G ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); cell chemotaxis (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955414 19630564 19641722 - 102010894 AGCD01015326;GBCE01032932;XM_005380036;XM_005380037 XP_005380093;XP_005380094 MODEL 8831527 protein-coding Gja9 gap junction protein alpha 9 NW_004955452 16498189 16500190 - 102018558 AGCD01044514;XM_013519619 XP_013375073 MODEL 8865972 protein-coding Tmie transmembrane inner ear INVOLVED IN inner ear morphogenesis (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 6 (ortholog); genetic disease (ortholog) NW_004955420 25428542 25435701 - 102021131 AGCD01021358;GBDJ01061219;XM_005383427 XP_005383484 MODEL 8864604 protein-coding Folh1b Putative N-acetylated-alpha-linked acidic dipeptidase ENCODES a protein that exhibits Ac-Asp-Glu binding (ortholog); metallocarboxypeptidase activity (ortholog); INVOLVED IN obsolete glutamate biosynthetic process (ortholog); positive regulation of glutamate receptor signaling pathway (ortholog) NW_004955414 3874182 3920616 - 102003751 AGCD01014845;AGCD01014846;GBBH01106825;XM_013512091 XP_013367545 MODEL 8709647 protein-coding Cdc16 cell division cycle 16 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955404 47126 71602 - 102028259 AGCD01003194;GBBH01228480;GBDJ01129351;XM_013515461;XM_013515464;XM_013515469;XM_013515473;XM_013515476 XP_013370915;XP_013370918;XP_013370923;XP_013370927;XP_013370930 MODEL 10386008 ncrna LOC106149220 uncharacterized LOC106149220 NW_004955440 11150592 11168661 + 106149220 AGCD01036403;XR_001235249 MODEL 8987453 ncrna LOC102004412 uncharacterized LOC102004412 NW_004955513 2245105 2262741 + 102004412 AGCD01066871;AGCD01066872;GBDF01085197;XR_001231734;XR_264457 MODEL 8811892 protein-coding Myog myogenin ENCODES a protein that exhibits chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to lithium ion (ortholog); ASSOCIATED WITH Experimental Arthritis (ortholog); Experimental Autoimmune Myasthenia Gravis (ortholog); obesity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955406 39099044 39102479 - 102006740 AGCD01006618;GBCB01072971;XM_005375246;XM_005375247 XP_005375303;XP_005375304 MODEL 8969040 pseudo LOC102025077 crooked neck-like protein 1 NW_004955405 23721294 23723863 - 102025077 AGCD01005135 MODEL 9012055 protein-coding Plxdc2 plexin domain containing 2 FOUND IN nuclear body (ortholog) NW_004955429 8141253 8566927 - 102021693 AGCD01028617;AGCD01028618;AGCD01028619;AGCD01028620;AGCD01028621;AGCD01028622;GBCE01053820;XM_005386938 XP_005386995 MODEL 39133522 snrna U4 U4 spliceosomal RNA 8878534 ncrna LOC102007252 uncharacterized LOC102007252 NW_004955427 4321562 4338950 + 102007252 AGCD01026962;GBDF01219849;XR_001234341;XR_001234342;XR_261230 MODEL 8731795 protein-coding Ofd1 OFD1 centriole and centriolar satellite protein ENCODES a protein that exhibits alpha-tubulin binding (ortholog); gamma-tubulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN axoneme assembly (ortholog); centriole replication (ortholog); cilium assembly (ortholog); ASSOCIATED WITH CAKUT (ortholog); ciliopathy (ortholog); COACH syndrome (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955519 4433747 4470842 - 102025282 AGCD01067982;AGCD01067983;GBCQ01121824;XM_005409202;XM_013506984;XM_013506985;XM_013506986;XM_013506987;XM_013506988;XM_013506989 XP_005409259;XP_013362438;XP_013362439;XP_013362440;XP_013362441;XP_013362442;XP_013362443 MODEL 9031817 ncrna LOC102016767 uncharacterized LOC102016767 NW_004955450 1451513 1455963 + 102016767 AGCD01042364;GBDF01226293;XR_262517 MODEL 8945552 protein-coding Cnr1 cannabinoid receptor 1 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); axonal fasciculation (ortholog); cannabinoid signaling pathway (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alcohol Withdrawal Delirium (ortholog); FOUND IN axon (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955411 15052151 15077320 - 102003006 AGCD01011929;AY303182;JN633197;XM_005377738;XM_013510704;XM_013510705 AAQ76976;AEO94875;XP_005377795;XP_013366158;XP_013366159 MODEL 8898835 protein-coding Pex19 peroxisomal biogenesis factor 19 ENCODES a protein that exhibits ATPase binding (ortholog); peroxisome membrane class-1 targeting sequence binding (ortholog); protein carrier chaperone (ortholog); INVOLVED IN establishment of protein localization to peroxisome (ortholog); peroxisome fission (ortholog); peroxisome membrane biogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955468 12049043 12057751 - 102016796 AGCD01052140;GBDF01003256;XM_005400203;XM_013522490 XP_005400260;XP_013377944 MODEL 8821700 protein-coding Txnl1 thioredoxin like 1 ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955402 41022771 41058731 - 102003395 AGCD01001005;AGCD01001006;AGCD01001007;GBCQ01036785;XM_005372969;XM_005372970;XR_259083 XP_005373026;XP_005373027 MODEL 8895061 protein-coding Mtmr9 myotubularin related protein 9 ENCODES a protein that exhibits enzyme regulator activity (ortholog); phosphatase activator activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); positive regulation of phosphatase activity (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Metabolic Syndrome (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955403 52689101 52732354 + 102025751 AGCD01003014;AGCD01003015;AGCD01003016;GBDF01048526;XM_005373811 XP_005373868 MODEL 9038333 protein-coding Ncor1 nuclear receptor corepressor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); histone deacetylase complex (ortholog) NW_004955467 1408292 1568539 - 102012299 AGCD01051264;AGCD01051265;AGCD01051266;AGCD01051267;AGCD01051268;GBDF01045203;GBDI01072467;XM_013522047 XP_013377501 MODEL 8866963 protein-coding Tlr6 toll like receptor 6 ENCODES a protein that exhibits diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); lipopeptide binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to amyloid-beta (ortholog); cellular response to diacyl bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); aspergillosis (ortholog); asthma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955443 8401461 8427175 + 102003592 AGCD01038323;AGCD01038324;AGCD01038325;AGCD01038326;GBDF01165081;XM_005391993;XM_005391995;XM_013518056;XM_013518057;XM_013518058;XM_013518059 XP_005392050;XP_005392052;XP_013373510;XP_013373511;XP_013373512;XP_013373513 MODEL 8750184 protein-coding LOC102004794 olfactory receptor 8G1-like NW_004955412 25040599 25044790 + 102004794 AGCD01013133;XM_005378413;XM_013511248 XP_005378470;XP_013366702 MODEL 8804657 protein-coding Arhgap27 Rho GTPase activating protein 27 ENCODES a protein that exhibits GTPase activator activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN receptor-mediated endocytosis (ortholog); Rho protein signal transduction (ortholog); FOUND IN endosome (ortholog) NW_004955451 18012050 18040013 - 102026708 AGCD01043788;AGCD01043789;AGCD01043790;GBBH01031724;GBCE01077884;XM_013519297 XP_013374751 MODEL 8734870 protein-coding Sdc2 syndecan 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of epithelial cell migration (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN glutamatergic synapse (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955417 12462354 12563374 + 102006129 AGCD01018162;GBCQ01035364;XM_005381834;XM_005381835 XP_005381891;XP_005381892 MODEL 151707887 mirna MIR770 microRNA 770 9037443 protein-coding Pms1 PMS1 homolog 1, mismatch repair system component ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN mismatch repair (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH breast cancer (ortholog); Colonic Polyps (ortholog); colorectal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955403 9021488 9100442 - 102005433 AGCD01001900;AGCD01001901;GBDK01434121;XM_005373313;XM_013512339 XP_005373370;XP_013367793 MODEL 8722175 protein-coding Rab3ip RAB3A interacting protein ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of filopodium assembly (ortholog); protein targeting to membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN centrosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955405 10031333 10091438 + 102025971 AGCD01004802;AGCD01004803;AGCD01004804;AGCD01004805;AGCD01004806;AGCD01004807;GBBH01082375;GBDF01009098;XM_013517540 XP_013372994 MODEL 8764834 protein-coding Rasgrf2 Ras protein specific guanine nucleotide releasing factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN long-term synaptic potentiation (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); regulation of NMDA receptor activity (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955418 28930666 29126495 - 102005807 AGCD01019448;AGCD01019449;AGCD01019450;AGCD01019451;AGCD01019452;AGCD01019453;GBDK01432521;XM_013512878 XP_013368332 MODEL 8902037 pseudo LOC102025081 60S ribosomal protein L35a pseudogene NW_004955406 33816177 33816497 + 102025081 AGCD01006488 MODEL 9054459 protein-coding LOC102021963 uncharacterized LOC102021963 NW_004955470 874205 883508 - 102021963 AGCD01052624;XM_005400823 XP_005400880 MODEL 8733326 protein-coding Exosc3 exosome component 3 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN CUT catabolic process (ortholog); DNA deamination (ortholog); isotype switching (ortholog); ASSOCIATED WITH congenital myopathy (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog) NW_004955419 28683896 28692006 + 102028969 AGCD01020473;GBCQ01174458;XM_005382860 XP_005382917 MODEL 39131450 protein-coding WNT3 Wnt family member 3 8794988 protein-coding Proser3 proline and serine rich 3 FOUND IN centrosome (ortholog) NW_004955468 2786736 2796851 - 102023137 AGCD01051838;GBDI01293635;XM_013522290 XP_013377744 MODEL 8862144 protein-coding Nell2 neural EGFL like 2 ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); identical protein binding (ortholog); INVOLVED IN commissural neuron axon guidance (ortholog); development of secondary female sexual characteristics (ortholog); fertilization (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); extracellular region (ortholog) NW_004955500 3669893 4049765 - 102007788 AGCD01063749;AGCD01063750;AGCD01063751;AGCD01063752;AGCD01063753;AGCD01063754;AGCD01063755;AGCD01063756;AGCD01063757;AGCD01063758;AGCD01063759;AGCD01063760;AGCD01063761;AGCD01063762;AGCD01063763;AGCD01063764;AGCD01063765;GBCE01024937;XM_005406591 XP_005406648 MODEL 9043215 protein-coding Pudp pseudouridine 5'-phosphatase ENCODES a protein that exhibits pseudouridine 5'-phosphatase activity (ortholog) NW_004955499 5110297 5181487 - 102017474 AGCD01063508;AGCD01063509;GBDI01066523;XM_005406540 XP_005406597 MODEL 8868713 protein-coding Pfdn1 prefoldin subunit 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); protein folding chaperone (ortholog); unfolded protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); B cell activation (ortholog); cerebellum development (ortholog); FOUND IN centrosome (ortholog); prefoldin complex (ortholog) NW_004955418 351078 414292 + 102009501 AGCD01018672;AGCD01018673;AGCD01018674;AGCD01018675;GBDF01005515;XM_005382045;XM_013512929;XR_001233501 XP_005382102;XP_013368383 MODEL 10328905 protein-coding LOC106148143 translation initiation factor IF-2-like NW_004955416 14382587 14383235 + 106148143 AGCD01017257;GBBH01094426;GBCQ01125153;XM_013512509 XP_013367963 MODEL 8716732 protein-coding Pigf phosphatidylinositol glycan anchor biosynthesis class F INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH ONYCHODYSTROPHY, OSTEODYSTROPHY, IMPAIRED INTELLECTUAL DEVELOPMENT, AND SEIZURES SYNDROME (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955441 13492334 13525581 - 102012131 AGCD01037151;GBDF01043189;XM_005390976;XM_005390977;XR_262076 XP_005391033;XP_005391034 MODEL 9016419 protein-coding LOC102028891 uncharacterized LOC102028891 NW_004955524 1069165 1071503 + 102028891 AGCD01068734;GBDF01266253;XM_005409504 XP_005409561 MODEL 8968861 protein-coding Tmem181 transmembrane protein 181 ENCODES a protein that exhibits toxic substance binding (ortholog) NW_004955439 3843823 3914702 - 102012247 AGCD01035690;AGCD01035691;AGCD01035692;AGCD01035693;AGCD01035694;GBDF01039663;XM_005390520;XM_005390521;XM_013517386 XP_005390577;XP_005390578;XP_013372840 MODEL 8707885 protein-coding Syt16 synaptotagmin 16 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid binding (ortholog) NW_004955466 7600990 7927710 - 102011187 AGCD01050959;AGCD01050960;AGCD01050961;AGCD01050962;AGCD01050963;AGCD01050964;AGCD01050965;AGCD01050966;AGCD01050967;AGCD01050968;AGCD01050969;AGCD01050970;AGCD01050971;AGCD01050972;AGCD01050973;GBDJ01218054;XM_013522016 XP_013377470 MODEL 8821472 protein-coding Rhoh ras homolog family member H ENCODES a protein that exhibits GTP binding (ortholog); kinase inhibitor activity (ortholog); INVOLVED IN mast cell activation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of T cell differentiation (ortholog); ASSOCIATED WITH coronin-1A deficiency (ortholog); immunodeficiency 129 (ortholog); FOUND IN cytoplasm (ortholog); immunological synapse (ortholog); plasma membrane (ortholog) NW_004955443 7227751 7269984 - 102019443 AGCD01038274;AGCD01038275;GBBH01183545;XM_005391959;XM_005391960;XM_005391961;XM_005391962;XM_013518115;XM_013518116 XP_005392016;XP_005392017;XP_005392018;XP_005392019;XP_013373569;XP_013373570 MODEL 9051501 protein-coding Ca10 carbonic anhydrase 10 (inactive) ASSOCIATED WITH asthma (ortholog) NW_004955451 9877768 10362363 + 102021197 AGCD01043313;AGCD01043314;AGCD01043315;AGCD01043316;AGCD01043317;AGCD01043318;AGCD01043319;AGCD01043320;XM_013519057 XP_013374511 MODEL 10112143 protein-coding LOC106149757 uncharacterized LOC106149757 NW_004955405 39673634 39690903 + 106149757 AGCD01005503;XM_013519749 XP_013375203 MODEL 9002044 protein-coding Ppard peroxisome proliferator activated receptor delta ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); fatty acid binding (ortholog); linoleic acid binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH Acute-Phase Reaction (ortholog); alcohol-associated liver disease (ortholog); biliary tract cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955437 3285281 3354099 + 102025837 AGCD01034305;AGCD01034306;AGCD01034307;AGCD01034308;AGCD01034309;GBBH01050550;GBDF01308373;XM_013516910 XP_013372364 MODEL 8969573 protein-coding Ccdc125 coiled-coil domain containing 125 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); negative regulation of cell motility (ortholog); negative regulation of Rho protein signal transduction (ortholog); FOUND IN cytoplasm (ortholog) NW_004955575 15727 50076 - 102019217 AGCD01075194;AGCD01075195;AGCD01075196;AGCD01075197;GBDJ01273825;XM_005413896;XM_005413902;XM_005413903;XM_013509587;XM_013509588;XM_013509589;XM_013509590;XM_013509591;XM_013509594;XM_013509595;XM_013509596;XM_013509597 XP_005413953;XP_005413959;XP_005413960;XP_013365041;XP_013365042;XP_013365043;XP_013365044;XP_013365045;XP_013365048;XP_013365049;XP_013365050;XP_013365051 MODEL 8775184 protein-coding Ccnb2 cyclin B2 INVOLVED IN G2/MI transition of meiotic cell cycle (ortholog); in utero embryonic development (ortholog); negative regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 15558874 15587456 - 102013782 AGCD01042795;AGCD01042796;AGCD01042797;GBDF01009616;XM_005393834;XM_013518870 XP_005393891;XP_013374324 MODEL 8886057 ncrna LOC102025086 uncharacterized LOC102025086 NW_004955455 14383123 14393046 - 102025086 AGCD01046089;AGCD01046090;GBBH01162429;XR_262859 MODEL 9007949 ncrna LOC102018312 uncharacterized LOC102018312 NW_004955430 19090204 19090891 + 102018312 AGCD01029707;GBDF01190178;XR_261433 MODEL 8769442 protein-coding LOC102027158 calreticulin-like NW_004955464 7446068 7511010 + 102027158 AGCD01050060;AGCD01050061;AGCD01050062;AGCD01050063;GBDF01245258;XM_005398776 XP_005398833 MODEL 8912475 protein-coding Gjb1 gap junction protein beta 1 ENCODES a protein that exhibits gap junction channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN epididymis development (ortholog); purine ribonucleotide transport (ortholog); ASSOCIATED WITH adenoma (ortholog); autoimmune thyroiditis (ortholog); cerebellar ataxia (ortholog); FOUND IN cytoplasm (ortholog); gap junction (ortholog); lateral plasma membrane (ortholog) NW_004955475 10779415 10787910 + 102004275 AGCD01055115;GBCQ01005957;XM_005401654;XM_005401655 XP_005401711;XP_005401712 MODEL 39132662 snrna U6 U6 spliceosomal RNA 9031261 protein-coding Wnt3a Wnt family member 3A ENCODES a protein that exhibits co-receptor binding (ortholog); frizzled binding (ortholog); identical protein binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis elongation involved in somitogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); hypothyroidism (ortholog); obesity (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); glutamatergic synapse (ortholog) NW_004955581 351375 382541 - 102016538 AGCD01075667;AGCD01075668;AGCD01075669;GBDK01185286;XM_005414244 XP_005414301 MODEL 10363235 ncrna LOC106146924 uncharacterized LOC106146924 NW_004955505 2458155 2461253 - 106146924 AGCD01064996;GBDF01224410;XR_001231570 MODEL 8853277 protein-coding Tmigd1 transmembrane and immunoglobulin domain containing 1 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN brush border assembly (ortholog); cell aggregation (ortholog); cell migration (ortholog); FOUND IN adherens junction (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955481 2977245 3009724 + 102004600 AGCD01056891;GBDK01145333;XM_005402660;XM_013503461 XP_005402717;XP_013358915 MODEL 9027598 protein-coding Pfdn2 prefoldin subunit 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); protein folding chaperone (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of amyloid fibril formation (ortholog); positive regulation of cytoskeleton organization (ortholog); protein folding (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955468 12868582 12882884 - 102030175 AGCD01052190;GBDJ01087416;XM_005400251 XP_005400308 MODEL 10082678 protein-coding Cdc20 cell division cycle 20 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); histone deacetylase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); metaphase/anaphase transition of cell cycle (ortholog); metaphase/anaphase transition of meiosis I (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 14 (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); kinetochore (ortholog) NW_004955537 2941265 2945158 + 106146263 AGCD01070940;GBDF01008741;XM_013507747 XP_013363201 MODEL 8810372 ncrna LOC102006489 uncharacterized LOC102006489 NW_004955432 19124642 19126210 + 102006489 AGCD01031169;GBDI01387174;XR_261535 MODEL 8908797 protein-coding Nuak1 NUAK family kinase 1 ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); regulation of cell adhesion (ortholog); regulation of cellular senescence (ortholog); ASSOCIATED WITH COVID-19 (ortholog); multiple myeloma (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955405 40156316 40188144 - 102003938 AGCD01005505;GBCE01016816;GBDF01040523;XM_013519022 XP_013374476 MODEL 8814655 protein-coding Tmem182 transmembrane protein 182 INVOLVED IN myotube cell development involved in skeletal muscle regeneration (ortholog); myotube differentiation involved in skeletal muscle regeneration (ortholog); negative regulation of myoblast differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog) NW_004955470 8173845 8218325 + 102022690 AGCD01052820;GBDF01158972;XM_005400775 XP_005400832 MODEL 8991556 protein-coding Ovch2 ovochymase 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN fertilization (ortholog) NW_004955414 23449841 23466034 - 102011977 AGCD01015499;XM_005380204 XP_005380261 MODEL 8982150 protein-coding Tlr7 toll like receptor 7 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); pattern recognition receptor activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to virus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); alcohol use disorder (ortholog); allergic contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); early phagosome (ortholog); endoplasmic reticulum (ortholog) NW_004955544 424897 443562 - 102029665 AGCD01071705;GBDJ01403647;XM_005411374 XP_005411431 MODEL 8881797 pseudo LOC102004416 RE1-silencing transcription factor-like NW_004955515 4007565 4012720 + 102004416 AGCD01067313 MODEL 8699552 pseudo LOC102004795 zinc finger CCCH domain-containing protein 14-like NW_004955466 12129671 12131134 - 102004795 AGCD01051113 MODEL 8901449 protein-coding Parp14 poly(ADP-ribose) polymerase family member 14 ENCODES a protein that exhibits enzyme binding (ortholog); NAD+ binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); INVOLVED IN NAD+ catabolic process (ortholog); negative regulation of gene expression (ortholog); negative regulation of type II interferon-mediated signaling pathway (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; interleukin-4 signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955427 21878980 21929097 + 102012562 AGCD01027461;GBDI01230166;XM_005386519;XM_013515129 XP_005386576;XP_013370583 MODEL 8849300 protein-coding Lrrc25 leucine rich repeat containing 25 INVOLVED IN canonical NF-kappaB signal transduction (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); gene expression (ortholog); FOUND IN cytosol (ortholog) NW_004955524 3118305 3122125 + 102023067 AGCD01068859;GBBH01185481;XM_005409572 XP_005409629 MODEL 8939432 ncrna LOC102007257 uncharacterized LOC102007257 NW_004955510 4095118 4095706 - 102007257 AGCD01066254;GBDF01078004;XR_264407 MODEL 39133523 snrna U4 U4 spliceosomal RNA 9007653 protein-coding Arhgap28 Rho GTPase activating protein 28 INVOLVED IN negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH allergic disease (ortholog); endometriosis (ortholog); meningioma (ortholog) NW_004955402 4417978 4531683 - 102004993 AGCD01000122;AGCD01000123;GBCE01069815;XM_013516584;XM_013516601;XM_013516633;XM_013516662 XP_013372038;XP_013372055;XP_013372087;XP_013372116 MODEL 8716906 ncrna LOC102018740 uncharacterized LOC102018740 NW_004955423 15350156 15352340 + 102018740 AGCD01023805;GBCB01061780;XR_260970 MODEL 8997869 protein-coding Nppa natriuretic peptide A ENCODES a protein that exhibits hormone activity (ortholog); hormone receptor binding (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN cardiac muscle hypertrophy in response to stress (ortholog); cell growth involved in cardiac muscle cell development (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN atrial natriuretic peptide signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adenocarcinoma (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); extracellular space (ortholog) NW_004955486 2061196 2062805 + 102004822 AGCD01058987;GBDF01208332;XM_005403981 XP_005404038 MODEL 9025907 protein-coding Oga O-GlcNAcase ENCODES a protein that exhibits [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity (ortholog); beta-N-acetylglucosaminidase activity (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN dATP metabolic process (ortholog); N-acetylglucosamine metabolic process (ortholog); negative regulation of cardiac muscle adaptation (ortholog); PARTICIPATES IN hexosamine biosynthetic pathway; ASSOCIATED WITH Reperfusion Injury (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955485 8477615 8509386 + 102017024 AGCD01058715;AGCD01058716;AGCD01058717;GBBH01090797;GBDJ01229492;XM_013504106 XP_013359560 MODEL 8797936 protein-coding Gsk3b glycogen synthase kinase 3 beta ENCODES a protein that exhibits ATP binding (ortholog); beta-catenin binding (ortholog); dynactin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); autosome genomic imprinting (ortholog); axonogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glycogen biosynthetic pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute kidney failure (ortholog); acute myocardial infarction (ortholog); FOUND IN axon (ortholog); beta-catenin destruction complex (ortholog); cell body (ortholog) NW_004955427 19489972 19671137 - 102022723 AGCD01027374;GBCB01076672;XM_005386460;XM_005386461;XM_013515157 XP_005386517;XP_005386518;XP_013370611 MODEL 8794472 protein-coding LOC102026132 taste receptor type 2 member 1-like NW_004955504 6925464 6926360 - 102026132 AGCD01064931;XM_005407095 XP_005407152 MODEL 10309719 ncrna LOC106149221 uncharacterized LOC106149221 NW_004955440 12617681 12624364 - 106149221 AGCD01036432;AGCD01036433;GBDF01078250;XR_001235250 MODEL 8987948 protein-coding LOC102025087 zinc finger protein 709-like NW_004955407 43049470 43074123 - 102025087 AGCD01007903;AGCD01007904;GBDF01011131;XM_005375955;XM_013505817 XP_005376012;XP_013361271 MODEL 8992577 protein-coding Pex2 peroxisomal biogenesis factor 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); cellular response to reactive oxygen species (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955444 3811972 3830666 + 102015782 AGCD01038797;GBDF01195338;XM_005392068;XM_005392069 XP_005392125;XP_005392126 MODEL 8776481 protein-coding Myom1 myomesin 1 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN extraocular skeletal muscle development (ortholog); positive regulation of cAMP/PKA signal transduction (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiac arrest (ortholog); cardiomyopathy (ortholog); FOUND IN M band (ortholog); sarcomere (ortholog) NW_004955402 7293415 7418226 + 102016434 AGCD01000170;AGCD01000171;AGCD01000172;AGCD01000173;AGCD01000174;GBCB01003992;GBDF01153494;XM_013518619 XP_013374073 MODEL 8752163 protein-coding Syt17 synaptotagmin 17 INVOLVED IN positive regulation of dendrite extension (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); trans-Golgi network (ortholog) NW_004955442 2843143 2921627 - 102004205 AGCD01037482;AGCD01037483;AGCD01037484;AGCD01037485;AGCD01037486;GBCE01114097;GBCQ01058207;XM_005391093 XP_005391150 MODEL 8944439 protein-coding Sdc3 syndecan 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); regulation of cell migration (ortholog); PARTICIPATES IN melanocortin system pathway; syndecan signaling pathway; ASSOCIATED WITH obesity (ortholog); FOUND IN axon (ortholog); membrane (ortholog); microspike (ortholog) NW_004955452 9442860 9479776 - 102003086 AGCD01044237;AGCD01044238;GBCB01111838;XM_005395001;XM_005395002;XM_013519686 XP_005395058;XP_005395059;XP_013375140 MODEL 39133703 mirna MIR802 microRNA 802 8807045 protein-coding Tead3 TEA domain transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN asymmetric neuroblast division (ortholog); hippo signaling (ortholog); positive regulation of stem cell population maintenance (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955437 3387812 3405232 - 102027454 AGCD01034310;AGCD01034311;GBDK01091589;XM_005389558;XM_005389559;XM_013516911;XM_013516912;XM_013516913;XM_013516914;XM_013516915;XR_001235067 XP_005389615;XP_005389616;XP_013372365;XP_013372366;XP_013372367;XP_013372368;XP_013372369 MODEL 8880456 protein-coding Rab40b RAB40B, member RAS oncogene family ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular detoxification (ortholog); negative regulation of actin filament bundle assembly (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); lamellipodium membrane (ortholog) NW_004955506 480236 509038 + 102006261 AGCD01065228;AGCD01065229;AGCD01065230;GBDI01219730;XM_005407186 XP_005407243 MODEL 8926152 protein-coding Tmigd2 transmembrane and immunoglobulin domain containing 2 ENCODES a protein that exhibits coreceptor activity (ortholog); INVOLVED IN positive regulation of activated T cell proliferation (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of cytokine production (ortholog) NW_004955495 4561251 4578432 + 102008430 AGCD01061930;AGCD01061931;AGCD01061932;AGCD01061933;AGCD01061934;GBDK01263518;XM_005405795;XM_013505331;XM_013505332;XM_013505333;XM_013505334 XP_005405852;XP_013360785;XP_013360786;XP_013360787;XP_013360788 MODEL 8914738 protein-coding Rasgrp1 RAS guanyl releasing protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); diacylglycerol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); B cell activation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); endometriosis (ortholog); immunodeficiency 64 (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955416 5494030 5561608 - 102009602 AGCD01016914;GBCE01059250;GBDK01242028;XM_013512606 XP_013368060 MODEL 9027589 protein-coding Tlr8 toll like receptor 8 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); defense response to virus (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic rhinitis (ortholog); anogenital venereal wart (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955544 302027 317110 - 102028898 AGCD01071699;GBDK01322932;XM_005411372;XM_005411373 XP_005411429;XP_005411430 MODEL 8747723 ncrna LOC102016769 uncharacterized LOC102016769 NW_004955596 714266 732336 - 102016769 AGCD01076528;AGCD01076529;AGCD01076530;AGCD01076531;GBCE01143550;XR_001232546 MODEL 8991588 protein-coding Prox1 prospero homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA binding domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acinar cell differentiation (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Neoplasm Metastasis (ortholog); obesity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955406 3715140 3770019 - 102012922 AGCD01005674;GBCQ01174906;XM_005374720;XM_005374721;XM_005374722;XM_005374723;XM_013519987 XP_005374777;XP_005374778;XP_005374779;XP_005374780;XP_013375441 MODEL 8790765 protein-coding Exosc4 exosome component 4 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA deamination (ortholog); histone mRNA catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955454 2732308 2734398 + 102021305 AGCD01045029;GBDF01053020;XM_005395841;XM_005395842 XP_005395898;XP_005395899 MODEL 8851104 protein-coding Cnr2 cannabinoid receptor 2 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); leukocyte chemotaxis (ortholog); negative regulation of action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Animal Disease Models (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955452 3763742 3795069 - 102023104 AGCD01043939;AGCD01043940;AGCD01043941;AGCD01043942;AGCD01043943;GBDI01052749;XM_005394784;XM_005394785;XM_005394787;XM_013519500;XM_013519501;XM_013519502 XP_005394841;XP_005394842;XP_005394844;XP_013374954;XP_013374955;XP_013374956 MODEL 8991351 protein-coding Nemf nuclear export mediator factor ENCODES a protein that exhibits alpha-aminoacyl-tRNA binding (ortholog); ribosomal large subunit binding (ortholog); INVOLVED IN CAT tailing (ortholog); nuclear export (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); RQC complex (ortholog) NW_004955409 12855655 12901673 + 102029375 AGCD01009572;AGCD01009573;AGCD01009574;AGCD01009575;AGCD01009576;GBBH01057421;GBDF01162790;XM_013510340 XP_013365794 MODEL 39133524 snrna U4 U4 spliceosomal RNA 8815960 ncrna LOC102018314 uncharacterized LOC102018314 NW_004955515 3174164 3177414 - 102018314 AGCD01067274;GBCQ01086323;XR_264521 MODEL 9035870 protein-coding Mtnap1 mitochondrial nucleoid associated protein 1 INVOLVED IN cell population proliferation (ortholog); mitochondrial DNA metabolic process (ortholog); positive regulation of mitochondrial DNA replication (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955553 251370 328606 + 102003809 AGCD01072851;AGCD01072852;AGCD01072853;AGCD01072854;GBDF01126559;XM_005412222;XM_013508614;XM_013508615;XM_013508616;XM_013508617;XM_013508618;XM_013508619 XP_005412279;XP_013364068;XP_013364069;XP_013364070;XP_013364071;XP_013364072;XP_013364073 MODEL 8961227 protein-coding Ncor2 nuclear receptor corepressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN cell proliferation in forebrain (ortholog); cerebellum development (ortholog); epidermis development (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered androgen signaling pathway; androgen signaling pathway; ASSOCIATED WITH breast cancer (ortholog); endometrial carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); histone deacetylase complex (ortholog); nuclear body (ortholog) NW_004955482 4927482 5031848 + 102010586 AGCD01057317;AGCD01057318;GBDJ01001939;XM_005403008;XM_013503630;XM_013503631;XM_013503632;XM_013503633;XM_013503634;XM_013503635;XM_013503636;XM_013503637;XM_013503638 XP_005403065;XP_013359084;XP_013359085;XP_013359086;XP_013359087;XP_013359088;XP_013359089;XP_013359090;XP_013359091;XP_013359092 MODEL 9013088 protein-coding Pigg phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group) ENCODES a protein that exhibits CP2 mannose-ethanolamine phosphotransferase activity (ortholog); transferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955514 119804 152603 + 102004960 AGCD01066997;GBDJ01395605;XM_005408666;XM_005408667;XM_013506834;XM_013506835;XM_013506836;XR_264489 XP_005408723;XP_005408724;XP_013362288;XP_013362289;XP_013362290 MODEL 8770191 protein-coding Rasgrp2 RAS guanyl releasing protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); leukocyte adhesion deficiency 3 (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955422 20426241 20440540 + 102003249 AGCD01023080;AGCD01023081;GBDJ01030510;GBDK01273984;XM_005384568 XP_005384625 MODEL 9058104 protein-coding Cdc20b cell division cycle 20B INVOLVED IN de novo centriole assembly (ortholog); FOUND IN deuterosome (ortholog) NW_004955446 12494176 12551397 + 102020391 AGCD01040235;AGCD01040236;AGCD01040237;GBDF01100721;XM_005392708;XM_013518457;XM_013518458 XP_005392765;XP_013373911;XP_013373912 MODEL 9017796 protein-coding LOC102021966 uncharacterized LOC102021966 NW_004955476 11530073 11534189 + 102021966 AGCD01055464;AGCD01055465;GBCB01109792;XM_005401860;XR_263647 XP_005401917 MODEL 8944078 protein-coding Pfdn4 prefoldin subunit 4 ENCODES a protein that exhibits amyloid-beta binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of amyloid fibril formation (ortholog); protein folding (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955445 4832220 4844007 - 102014300 AGCD01039432;AGCD01039433;GBDJ01311379;XM_005392283;XM_013518390 XP_005392340;XP_013373844 MODEL 8779373 protein-coding Pparg peroxisome proliferator activated receptor gamma ENCODES a protein that exhibits alpha-actinin binding (ortholog); arachidonate binding (ortholog); chromatin binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); beige fat cell differentiation (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN DNA modification pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955429 14814690 14936869 + 102018008 AGCD01028785;AGCD01028786;AGCD01028787;GBCQ01128594;XM_005387017;XM_005387018;XM_005387019 XP_005387074;XP_005387075;XP_005387076 MODEL 8937024 protein-coding Ccdc126 coiled-coil domain containing 126 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955410 25827309 25857028 + 102015614 AGCD01011177;AGCD01011178;AGCD01011179;GBDF01043959;XM_005377402;XM_005377404;XM_005377405;XM_013510697;XM_013510698;XR_001232773 XP_005377459;XP_005377461;XP_005377462;XP_013366151;XP_013366152 MODEL 8888536 protein-coding Syt2 synaptotagmin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); INVOLVED IN calcium-dependent activation of synaptic vesicle fusion (ortholog); positive regulation of dendrite extension (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 7 (ortholog); FOUND IN axon (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) NW_004955406 38638192 38743077 - 102028056 AGCD01006609;GBDF01114073;XM_005375224;XM_005375225;XM_005375226 XP_005375281;XP_005375282;XP_005375283 MODEL 8738765 protein-coding Txnl4a thioredoxin like 4A INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Burn-McKeown syndrome (ortholog); genetic disease (ortholog); Oculootofacial Dysplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955402 63153274 63166208 + 102027802 AGCD01001661;GBDI01113001;XM_005373122;XM_013511663 XP_005373179;XP_013367117 MODEL 8759701 protein-coding Parp16 poly(ADP-ribose) polymerase family member 16 ENCODES a protein that exhibits kinase binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); endoplasmic reticulum unfolded protein response (ortholog); IRE1-mediated unfolded protein response (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum tubular network (ortholog); nuclear envelope (ortholog) NW_004955450 10157731 10177939 + 102008047 AGCD01042608;GBDI01292025;GBDK01358905;XM_013519015 XP_013374469 MODEL 9034241 ncrna LOC102028893 uncharacterized LOC102028893 NW_004955437 6332056 6339709 + 102028893 AGCD01034431;AGCD01034432;AGCD01034433;GBBH01078729;XR_001235023;XR_261863 MODEL 10238128 ncrna LOC106148144 uncharacterized LOC106148144 NW_004955416 14487661 14489983 - 106148144 AGCD01017271;GBCB01073897;XR_001233317 MODEL 8720025 protein-coding Puf60 poly(U) binding splicing factor 60 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH CHARGE syndrome (ortholog); Experimental Neoplasms (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955454 2482968 2497339 - 102014866 AGCD01045022;GBDK01022705;XM_005395816;XM_005395817;XM_005395818;XM_013520058;XM_013520059;XM_013520060 XP_005395873;XP_005395874;XP_005395875;XP_013375512;XP_013375513;XP_013375514 MODEL 8803533 protein-coding Arhgap29 Rho GTPase activating protein 29 ENCODES a protein that exhibits PDZ domain binding (ortholog); ASSOCIATED WITH cleft lip (ortholog); COVID-19 (ortholog); EEC syndrome (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955423 511635 570593 + 102009958 AGCD01023414;GBCB01101021;GBCE01076037;XM_005384999 XP_005385056 MODEL 8781787 protein-coding LOC102027163 zinc finger protein 850-like NW_004955468 1623956 1748535 + 102027163 AGCD01051778;AGCD01051779;AGCD01051780;GBDI01208707;XM_005399890 XP_005399947 MODEL 8738210 protein-coding Tmlhe trimethyllysine hydroxylase, epsilon ENCODES a protein that exhibits oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (ortholog); trimethyllysine dioxygenase activity (ortholog); INVOLVED IN carnitine biosynthetic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autistic disorder (ortholog); cerebellar hypoplasia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955594 272668 329997 + 102022765 AGCD01076425;AGCD01076426;GBBH01138990;XM_005414642;XM_013510005 XP_005414699;XP_013365459 MODEL 39132663 snrna U6 U6 spliceosomal RNA 8741495 protein-coding Rhoj ras homolog family member J ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); regulation of cell shape (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Colonic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955466 6476822 6564890 - 102010140 AGCD01050928;GBBH01186921;XM_005399158 XP_005399215 MODEL 10256798 ncrna LOC106146925 uncharacterized LOC106146925 NW_004955505 6647464 6659761 + 106146925 AGCD01065180;GBDF01139869;XR_001231572 MODEL 10098878 ncrna LOC106149758 uncharacterized LOC106149758 NW_004955405 10281450 10286682 + 106149758 AGCD01004809;AGCD01004810;XR_001236124 MODEL 8749942 protein-coding Pms2 PMS1 homolog 2, mismatch repair system component ENCODES a protein that exhibits DNA binding (ortholog); MutSalpha complex binding (ortholog); single base insertion or deletion binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); meiotic mismatch repair (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia 1 (ortholog); Brain Neoplasms (ortholog); breast cancer (ortholog); FOUND IN MutLalpha complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955460 13762854 13791462 + 102023443 AGCD01048722;AGCD01048723;GBDF01225942;XM_005397895;XM_013521160 XP_005397952;XP_013376614 MODEL 10241858 ncrna LOC106149222 uncharacterized LOC106149222 NW_004955440 16710879 16729299 - 106149222 AGCD01036527;XR_001235251 MODEL 8994864 pseudo LOC102006491 ferritin heavy chain-like NW_004955434 1171311 1191802 + 102006491 AGCD01032056;AGCD01032057 MODEL 8743427 pseudo LOC102004419 acyl-protein thioesterase 1 pseudogene NW_004955535 3723222 3723807 + 102004419 AGCD01070706;XM_005410498 MODEL 39133649 mirna MIR873 microRNA 873 8728973 protein-coding Myom2 myomesin 2 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN extraocular skeletal muscle development (ortholog); sarcomere organization (ortholog); ASSOCIATED WITH Contracture (ortholog); FOUND IN M band (ortholog) NW_004955403 57718120 57783338 - 102013242 AGCD01003156;AGCD01003157;GBDI01074856;XM_005373853;XM_005373854;XM_013514994 XP_005373910;XP_005373911;XP_013370448 MODEL 8997249 protein-coding Sdc4 syndecan 4 ENCODES a protein that exhibits fibronectin binding (ortholog); identical protein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN inner ear receptor cell stereocilium organization (ortholog); negative regulation of T cell proliferation (ortholog); neural tube closure (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH bacterial infectious disease (ortholog); COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cell surface (ortholog); costamere (ortholog); focal adhesion (ortholog) NW_004955445 11990916 12009178 + 102008039 AGCD01039731;GBCQ01033149;XM_005392434 XP_005392491 MODEL 9043286 ncrna LOC102018745 uncharacterized LOC102018745 NW_004955425 3755805 3770222 - 102018745 AGCD01025296;AGCD01025297;GBDF01112248;XR_261124 MODEL 8893140 pseudo LOC102016777 MICOS complex subunit MIC27-like NW_004955454 6941335 6942263 + 102016777 AGCD01045274 MODEL 10335251 protein-coding Tlr9 toll like receptor 9 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); pattern recognition receptor activity (ortholog); siRNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to chloroquine (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Achlorhydria (ortholog); acute kidney failure (ortholog); acute necrotizing pancreatitis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955532 3828645 3832699 - 106146245 AGCD01070299;GBBH01177352;XM_005410346;XM_013507652;XM_013507653 XP_005410403;XP_013363106;XP_013363107 MODEL 8877016 protein-coding Wnt4 Wnt family member 4 ENCODES a protein that exhibits frizzled binding (ortholog); receptor ligand activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH 46,XX Sex Reversal with Dysgenesis of Kidneys, Adrenals, and Lungs (ortholog); acute kidney failure (ortholog); Dwarfism (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular matrix (ortholog) NW_004955452 2319446 2344740 - 102006534 AGCD01043890;AGCD01043891;GBDF01041136;XM_005394734 XP_005394791 MODEL 8803763 protein-coding Gskip GSK3B interacting protein ENCODES a protein that exhibits beta-catenin binding (ortholog); protein kinase A binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); negative regulation of protein kinase activity (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH myeloid leukemia (ortholog); myeloid neoplasm (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955438 18153564 18174980 + 102022857 AGCD01035464;AGCD01035465;GBCB01042777;XM_005390397 XP_005390454 MODEL 8938520 protein-coding LOC102025089 olfactory receptor 9-like NW_004955458 3200530 3201468 - 102025089 AGCD01047278;XM_013520865 XP_013376319 MODEL 8911228 protein-coding Gjb2 gap junction protein beta 2 ENCODES a protein that exhibits calcium ion binding (ortholog); gap junction channel activity (ortholog); gap junction channel activity involved in cell communication by electrical coupling (ortholog); INVOLVED IN cell-cell signaling (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to glucagon stimulus (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autoimmune thyroiditis (ortholog); autosomal dominant keratitis-ichthyosis-deafness syndrome (ortholog); FOUND IN astrocyte projection (ortholog); cell body (ortholog); cell junction (ortholog) NW_004955497 987213 989477 - 102008747 AGCD01062443;GBCC01001206;XM_005406301 XP_005406358 MODEL 10361932 ncrna LOC106148145 uncharacterized LOC106148145 NW_004955416 14490480 14494426 - 106148145 AGCD01017271;GBDK01095908;XR_001233318 MODEL 10222039 protein-coding Ncr3 natural cytotoxicity triggering receptor 3 ENCODES a protein that exhibits identical protein binding (ortholog); immune receptor activity (ortholog); INVOLVED IN immune response-activating cell surface receptor signaling pathway (ortholog); natural killer cell activation (ortholog); NK T cell activation (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Chronic Hepatitis C (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 130360 134751 - 106149106 AGCD01034102;AGCD01034103;AGCD01034104;GBBH01150590;GBCE01101721;XM_013516929 XP_013372383 MODEL 8952085 protein-coding Nuak2 NUAK family kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to glucose starvation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Anencephaly 2 (ortholog); FOUND IN nuclear speck (ortholog) NW_004955406 41050396 41069066 - 102007623 AGCD01006670;GBDK01236711;XM_005375354 XP_005375411 MODEL 8759035 protein-coding Pigh phosphatidylinositol glycan anchor biosynthesis class H INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH Glycosylphosphatidylinositol Biosynthesis Defect 17 (ortholog); prostate cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) NW_004955466 2601368 2616255 + 102011852 AGCD01050748;AGCD01050749;AGCD01050750;GBBH01168046;XM_005399070;XM_005399071;XM_005399072;XM_013521893;XR_263283;XR_263284 XP_005399127;XP_005399128;XP_005399129;XP_013377347 MODEL 8891187 ncrna LOC102004796 uncharacterized LOC102004796 NW_004955467 6856123 6857620 - 102004796 AGCD01051425;GBDI01226874;XR_263346 MODEL 8746645 protein-coding Ovgp1 oviductal glycoprotein 1 INVOLVED IN negative regulation of binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH pneumoconiosis (ortholog); FOUND IN egg coat (ortholog); perivitelline space (ortholog) NW_004955435 14915168 14929171 - 102026667 AGCD01033258;GBDJ01015502;XM_005388948 XP_005389005 MODEL 8861639 protein-coding Ccnb3 cyclin B3 ASSOCIATED WITH autistic disorder (ortholog); Habitual Abortions (ortholog); osteosarcoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955543 1377932 1444327 + 102016850 AGCD01071621;AGCD01071622;GBDF01192859;XM_005411353;XM_005411354;XM_013508133 XP_005411410;XP_005411411;XP_013363587 MODEL 9047365 protein-coding LOC102007258 glycine N-phenylacetyltransferase-like NW_004955511 3686412 3716368 - 102007258 AGCD01066472;AGCD01066473;AGCD01066474;GBCQ01037301;XM_005408050;XM_005408051;XM_005408052;XM_005408054;XM_005408055;XM_013506345;XM_013506346 XP_005408107;XP_005408108;XP_005408109;XP_005408111;XP_005408112;XP_013361799;XP_013361800 MODEL 8725027 protein-coding Tead4 TEA domain transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN blastocyst formation (ortholog); cell fate commitment (ortholog); cell fate specification (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955429 18497223 18552504 + 102025932 AGCD01028915;GBCB01007409;XM_005387130;XM_013515542;XM_013515543;XM_013515544;XM_013515545;XM_013515546;XM_013515547 XP_005387187;XP_013370996;XP_013370997;XP_013370998;XP_013370999;XP_013371000;XP_013371001 MODEL 8982690 protein-coding Rab40c RAB40C, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cell migration (ortholog); lipid droplet formation (ortholog); negative regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955442 16577843 16614132 - 102024512 AGCD01037901;AGCD01037902;AGCD01037903;GBCE01155373;GBCQ01129291;XM_005391634 XP_005391691 MODEL 8816389 protein-coding Nppb natriuretic peptide B ENCODES a protein that exhibits hormone receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN brain natriuretic peptide signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular space (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955486 2054775 2056130 + 102004487 AGCD01058987;GBDJ01025595;XM_005403980 XP_005404037 MODEL 8896070 pseudo LOC102026133 electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial-like NW_004955505 2313143 2314323 + 102026133 AGCD01064992 MODEL 39133525 snrna U4 U4 spliceosomal RNA 8981889 protein-coding Prox2 prospero homeobox 2 NW_004955523 697475 708675 + 102016410 AGCD01068476;GBDF01279087;XM_005409386 XP_005409443 MODEL 8819669 protein-coding Ccdc127 coiled-coil domain containing 127 INVOLVED IN lipid homeostasis (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955504 17499 36804 - 102017141 AGCD01064813;GBCE01077932;XM_0054